BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 003946
(784 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|359479705|ref|XP_003632339.1| PREDICTED: pentatricopeptide repeat-containing protein At1g03100,
mitochondrial-like [Vitis vinifera]
Length = 784
Score = 1156 bits (2991), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 557/740 (75%), Positives = 632/740 (85%), Gaps = 7/740 (0%)
Query: 48 LVRCYLTYLNMQTGVLPNLNEFTYPTHPFSSMGGTILVQARDPAKLSAEIENAINEHRYG 107
+ YLT LNM VL + + FSSMGGTILVQARDPAKL E+ENAI+ HRY
Sbjct: 47 FISPYLTNLNMGNAVL---DSRSGSIQSFSSMGGTILVQARDPAKLCEELENAIDGHRYS 103
Query: 108 DAWKLYEQHMQMDGFPRKTLVNKILTSFVESLDSKWLEKAYGLVEQAFEEGKQILLEKEP 167
DAWKL+EQHM M+GFPRK++VN +LTSF ESLD +WLEKAYGLVE+AF E KQ LLEKE
Sbjct: 104 DAWKLFEQHMGMEGFPRKSIVNTVLTSFSESLDVQWLEKAYGLVERAFAESKQNLLEKET 163
Query: 168 LIYLSLGLSKCGLPVPASTILRKLVATEQYPPVTAWSAILAHMSLTAPGAYLAAELILEI 227
LIY+S GL+ CGLPVPAST+LRKLV E++PPV+AWSAILAHMS TA GAYLAAELILEI
Sbjct: 164 LIYISFGLASCGLPVPASTVLRKLVEMEEFPPVSAWSAILAHMSQTASGAYLAAELILEI 223
Query: 228 GYLFQDGRVDPRKKCNAPLIAMKPNTNTFNIALAGCLLFETTRKAEQLLDIMPRIGVKAD 287
GYLFQDGRVDPRKK N PL+AMKPNT FNIALAGCLLF TTRKAE+LLD+MPR+GVK D
Sbjct: 224 GYLFQDGRVDPRKKSNRPLLAMKPNTTAFNIALAGCLLFGTTRKAEKLLDMMPRVGVKPD 283
Query: 288 SNLLIIMAHIYERNGRREELRKLQRHIDEAVNLSDIQFRQFYNCLLSCHLKFGDLNSASK 347
NLLIIMAHIYERNGRRE+LRKL+RHIDEA NLSDIQFRQFYNCLL+CHLKFGDL+SAS
Sbjct: 284 VNLLIIMAHIYERNGRREDLRKLKRHIDEAHNLSDIQFRQFYNCLLTCHLKFGDLDSASH 343
Query: 348 MVLEMLQRAKEARNSLAAAMLPFNAVGVNNRTP----SEQNVNCTNSVDLENSGIIENHI 403
MVLEML++A+EARNSL+AA L F AVG N + SE++++ S LEN+ +
Sbjct: 344 MVLEMLRKAREARNSLSAATLMFEAVGSGNTSTQEQVSEKSLSHRKSDGLENARPNTSLS 403
Query: 404 LSYEDFTKDRKFVALEAEVKRVLQTLLGMLQKQVELITTEHGILQPTEKIYIKLVKAFLE 463
+SYE+F++DR F+ LEAE K +L LL LQ QVE ITTE GILQPTE+IY+KLVKAFLE
Sbjct: 404 ISYEEFSRDRNFLKLEAEAKEILDRLLAKLQMQVEFITTERGILQPTERIYVKLVKAFLE 463
Query: 464 AGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQAHDLLDEMHLAGVRASS 523
AGKTK+L FLIKAEKE+ VS D++AL HVI CI LGWLDQAHDLLDEM LAGVR S
Sbjct: 464 AGKTKQLAEFLIKAEKEDSPVSTDNSALVHVINSCILLGWLDQAHDLLDEMRLAGVRTGS 523
Query: 524 SVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKE 583
SVY+SLLKAY +ANR E+T+LLRDAR AG+QLD+SCYEAL+QS+++QKDT GALH+FKE
Sbjct: 524 SVYSSLLKAYCKANRAGEITSLLRDARKAGVQLDSSCYEALIQSRVLQKDTEGALHVFKE 583
Query: 584 MKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKK 643
MKE+KIPRSGH+EFEMLVKGCA++ EAGLMAKLL E+KE QR+DCGVHDWNNVIHFFC+K
Sbjct: 584 MKEAKIPRSGHREFEMLVKGCAESGEAGLMAKLLHEIKEEQRVDCGVHDWNNVIHFFCRK 643
Query: 644 RLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEMKSFASSTSMNF 703
RLMQDAEKALK+MRSLGH PNAQTFHSMVTGYAAIGGKY EVTELWGEMKSFASS+SM F
Sbjct: 644 RLMQDAEKALKKMRSLGHAPNAQTFHSMVTGYAAIGGKYVEVTELWGEMKSFASSSSMKF 703
Query: 704 DEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFIDKYKYRTLFLKYHKTLYKGKTPKFQ 763
D+ELLD+VLYTFVRGGFF RANEVV MME GKMFIDKYKYRTLFLKYHKTLYK K PK Q
Sbjct: 704 DQELLDAVLYTFVRGGFFVRANEVVEMMERGKMFIDKYKYRTLFLKYHKTLYKSKPPKVQ 763
Query: 764 TEAQLKKREAALGFKKWLGL 783
TEAQ ++R+AAL FKKW+GL
Sbjct: 764 TEAQFRRRDAALTFKKWVGL 783
>gi|296085227|emb|CBI28722.3| unnamed protein product [Vitis vinifera]
Length = 1361
Score = 1147 bits (2968), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 557/740 (75%), Positives = 632/740 (85%), Gaps = 7/740 (0%)
Query: 48 LVRCYLTYLNMQTGVLPNLNEFTYPTHPFSSMGGTILVQARDPAKLSAEIENAINEHRYG 107
+ YLT LNM VL + + FSSMGGTILVQARDPAKL E+ENAI+ HRY
Sbjct: 624 FISPYLTNLNMGNAVL---DSRSGSIQSFSSMGGTILVQARDPAKLCEELENAIDGHRYS 680
Query: 108 DAWKLYEQHMQMDGFPRKTLVNKILTSFVESLDSKWLEKAYGLVEQAFEEGKQILLEKEP 167
DAWKL+EQHM M+GFPRK++VN +LTSF ESLD +WLEKAYGLVE+AF E KQ LLEKE
Sbjct: 681 DAWKLFEQHMGMEGFPRKSIVNTVLTSFSESLDVQWLEKAYGLVERAFAESKQNLLEKET 740
Query: 168 LIYLSLGLSKCGLPVPASTILRKLVATEQYPPVTAWSAILAHMSLTAPGAYLAAELILEI 227
LIY+S GL+ CGLPVPAST+LRKLV E++PPV+AWSAILAHMS TA GAYLAAELILEI
Sbjct: 741 LIYISFGLASCGLPVPASTVLRKLVEMEEFPPVSAWSAILAHMSQTASGAYLAAELILEI 800
Query: 228 GYLFQDGRVDPRKKCNAPLIAMKPNTNTFNIALAGCLLFETTRKAEQLLDIMPRIGVKAD 287
GYLFQDGRVDPRKK N PL+AMKPNT FNIALAGCLLF TTRKAE+LLD+MPR+GVK D
Sbjct: 801 GYLFQDGRVDPRKKSNRPLLAMKPNTTAFNIALAGCLLFGTTRKAEKLLDMMPRVGVKPD 860
Query: 288 SNLLIIMAHIYERNGRREELRKLQRHIDEAVNLSDIQFRQFYNCLLSCHLKFGDLNSASK 347
NLLIIMAHIYERNGRRE+LRKL+RHIDEA NLSDIQFRQFYNCLL+CHLKFGDL+SAS
Sbjct: 861 VNLLIIMAHIYERNGRREDLRKLKRHIDEAHNLSDIQFRQFYNCLLTCHLKFGDLDSASH 920
Query: 348 MVLEMLQRAKEARNSLAAAMLPFNAVGVNNRTP----SEQNVNCTNSVDLENSGIIENHI 403
MVLEML++A+EARNSL+AA L F AVG N + SE++++ S LEN+ +
Sbjct: 921 MVLEMLRKAREARNSLSAATLMFEAVGSGNTSTQEQVSEKSLSHRKSDGLENARPNTSLS 980
Query: 404 LSYEDFTKDRKFVALEAEVKRVLQTLLGMLQKQVELITTEHGILQPTEKIYIKLVKAFLE 463
+SYE+F++DR F+ LEAE K +L LL LQ QVE ITTE GILQPTE+IY+KLVKAFLE
Sbjct: 981 ISYEEFSRDRNFLKLEAEAKEILDRLLAKLQMQVEFITTERGILQPTERIYVKLVKAFLE 1040
Query: 464 AGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQAHDLLDEMHLAGVRASS 523
AGKTK+L FLIKAEKE+ VS D++AL HVI CI LGWLDQAHDLLDEM LAGVR S
Sbjct: 1041 AGKTKQLAEFLIKAEKEDSPVSTDNSALVHVINSCILLGWLDQAHDLLDEMRLAGVRTGS 1100
Query: 524 SVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKE 583
SVY+SLLKAY +ANR E+T+LLRDAR AG+QLD+SCYEAL+QS+++QKDT GALH+FKE
Sbjct: 1101 SVYSSLLKAYCKANRAGEITSLLRDARKAGVQLDSSCYEALIQSRVLQKDTEGALHVFKE 1160
Query: 584 MKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKK 643
MKE+KIPRSGH+EFEMLVKGCA++ EAGLMAKLL E+KE QR+DCGVHDWNNVIHFFC+K
Sbjct: 1161 MKEAKIPRSGHREFEMLVKGCAESGEAGLMAKLLHEIKEEQRVDCGVHDWNNVIHFFCRK 1220
Query: 644 RLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEMKSFASSTSMNF 703
RLMQDAEKALK+MRSLGH PNAQTFHSMVTGYAAIGGKY EVTELWGEMKSFASS+SM F
Sbjct: 1221 RLMQDAEKALKKMRSLGHAPNAQTFHSMVTGYAAIGGKYVEVTELWGEMKSFASSSSMKF 1280
Query: 704 DEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFIDKYKYRTLFLKYHKTLYKGKTPKFQ 763
D+ELLD+VLYTFVRGGFF RANEVV MME GKMFIDKYKYRTLFLKYHKTLYK K PK Q
Sbjct: 1281 DQELLDAVLYTFVRGGFFVRANEVVEMMERGKMFIDKYKYRTLFLKYHKTLYKSKPPKVQ 1340
Query: 764 TEAQLKKREAALGFKKWLGL 783
TEAQ ++R+AAL FKKW+GL
Sbjct: 1341 TEAQFRRRDAALTFKKWVGL 1360
>gi|224082666|ref|XP_002306785.1| predicted protein [Populus trichocarpa]
gi|222856234|gb|EEE93781.1| predicted protein [Populus trichocarpa]
Length = 750
Score = 1140 bits (2948), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 555/732 (75%), Positives = 626/732 (85%), Gaps = 1/732 (0%)
Query: 53 LTYLNMQTGVLPNLNEFTYPTHPFSSMGGTILVQARDPAKLSAEIENAINEHRYGDAWKL 112
LT LN T V+ F + +H FS++ GTILVQARDPAKL EIENAI+EHR+ DAWKL
Sbjct: 18 LTNLNGPTVVVGIQGGFNHQSHSFSTLAGTILVQARDPAKLCMEIENAIDEHRFNDAWKL 77
Query: 113 YEQHMQMDGFPRKTLVNKILTSFVESLDSKWLEKAYGLVEQAFEEGKQILLEKEPLIYLS 172
+EQH+ MDGFPRK++VNK+LTS+ SLD WLEKAYGLVEQ EE KQ LLEKEPLIYLS
Sbjct: 78 FEQHLHMDGFPRKSIVNKLLTSYSASLDVPWLEKAYGLVEQTIEESKQNLLEKEPLIYLS 137
Query: 173 LGLSKCGLPVPASTILRKLVATEQYPPVTAWSAILAHMSLTAPGAYLAAELILEIGYLFQ 232
L+KCGLPVPAST+LRKL+ EQYPPVTAWSAILAHMSLTAPGAYLAAELILEIGYLFQ
Sbjct: 138 FVLAKCGLPVPASTVLRKLIQMEQYPPVTAWSAILAHMSLTAPGAYLAAELILEIGYLFQ 197
Query: 233 DGRVDPRKKCNAPLIAMKPNTNTFNIALAGCLLFETTRKAEQLLDIMPRIGVKADSNLLI 292
DGRVDPRKK NAPLIAMKPNT NIAL GCLLF TTRKAEQLLD+MPRIG++AD+NLLI
Sbjct: 198 DGRVDPRKKINAPLIAMKPNTIAMNIALTGCLLFGTTRKAEQLLDMMPRIGIRADTNLLI 257
Query: 293 IMAHIYERNGRREELRKLQRHIDEAVNLSDIQFRQFYNCLLSCHLKFGDLNSASKMVLEM 352
IMAHIYERNGRREELRKLQRHID++ +L+D QFRQFYNCLL+CHLKFGDL++AS MVL M
Sbjct: 258 IMAHIYERNGRREELRKLQRHIDDSQSLTDTQFRQFYNCLLTCHLKFGDLDAASNMVLIM 317
Query: 353 LQRAKEARNSLAAAMLPFNAVGVNNRTP-SEQNVNCTNSVDLENSGIIENHILSYEDFTK 411
L++A+EARNS A A L F ++ P SE++++ S L N+ ++ +SYE+F +
Sbjct: 318 LRKAREARNSFATAALLFPIDKKSSPGPVSEESLSHKESGGLGNNRSNKDLTISYEEFYR 377
Query: 412 DRKFVALEAEVKRVLQTLLGMLQKQVELITTEHGILQPTEKIYIKLVKAFLEAGKTKELT 471
DR F+ L+ E K VL TLL LQ QVELITTE GILQPTEKIY+KLVKAFLE+GKTKEL
Sbjct: 378 DRNFLKLDTEAKEVLSTLLVELQMQVELITTERGILQPTEKIYVKLVKAFLESGKTKELA 437
Query: 472 HFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLK 531
FLIKAEKE+ S+DD+AL HVI CISLGWLDQAHDLLDEM LAG+R SSSVYASLLK
Sbjct: 438 AFLIKAEKEDSPASNDDSALVHVINSCISLGWLDQAHDLLDEMCLAGIRTSSSVYASLLK 497
Query: 532 AYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPR 591
AY +AN+ EVTALLRDAR AGIQLD+S Y AL++ +++QKDT ALH+FKEMKE+KIPR
Sbjct: 498 AYCKANQTGEVTALLRDARRAGIQLDSSSYNALIEFRVIQKDTKEALHIFKEMKEAKIPR 557
Query: 592 SGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEK 651
+GHQEFEMLVKGCA+ EAGLMAKLLQE+KE Q D GVHDWNNVIHFFCKKRLMQDAEK
Sbjct: 558 TGHQEFEMLVKGCAEGGEAGLMAKLLQEIKEEQAADSGVHDWNNVIHFFCKKRLMQDAEK 617
Query: 652 ALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEMKSFASSTSMNFDEELLDSV 711
ALK+MRSLGH PNAQTFHSMVTGYAAIGGKY EVTELWGEMKS AS+TSM FD+ELLDSV
Sbjct: 618 ALKKMRSLGHAPNAQTFHSMVTGYAAIGGKYIEVTELWGEMKSIASATSMKFDQELLDSV 677
Query: 712 LYTFVRGGFFARANEVVAMMEEGKMFIDKYKYRTLFLKYHKTLYKGKTPKFQTEAQLKKR 771
LYTFVRGGFF+RANEVV MME+GKMFIDKYKYRTL+LKYHKTLYKGKTPK QTE+ +KKR
Sbjct: 678 LYTFVRGGFFSRANEVVDMMEKGKMFIDKYKYRTLYLKYHKTLYKGKTPKIQTESLVKKR 737
Query: 772 EAALGFKKWLGL 783
EAAL FKKWLGL
Sbjct: 738 EAALTFKKWLGL 749
>gi|255567544|ref|XP_002524751.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223535935|gb|EEF37594.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 787
Score = 1091 bits (2822), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 540/786 (68%), Positives = 636/786 (80%), Gaps = 15/786 (1%)
Query: 6 RHFSA--SSSAILGLFNDSCQNAAWVSRHQIQSARSQWLGFEPILVRCYLTYLN--MQTG 61
RH S S + +L L +S + +S H +Q + S P+ ++ N +
Sbjct: 8 RHESTLISPAVLLSLLVNSGYDVTRISGHHVQVSSSH----RPVYAFATSSFTNSLLPLD 63
Query: 62 VLPNLNEFTYPTHPFSSMGGTILVQARDPAKLSAEIENAINEHRYGDAWKLYEQHMQMDG 121
L N Y + S++ GTILVQARDPA+LSA +E+AINE R DAWKL+E+HMQM+G
Sbjct: 64 GLGMWNGLNYQVNSLSTLAGTILVQARDPARLSAGVEHAINELRLSDAWKLFEKHMQMEG 123
Query: 122 FPRKTLVNKILTSFVESLDSKWLEKAYGLVEQAFEEGKQILLEKEPLIYLSLGLSKCGLP 181
FP+K++VNK+L S ES D WLEKAYGLVEQA +E KQ LLEK+ LI+LS L+KCGL
Sbjct: 124 FPQKSVVNKLLASIAESNDVPWLEKAYGLVEQAIKESKQNLLEKDTLIFLSFNLAKCGLA 183
Query: 182 VPASTILRKLVATEQYPPVTAWSAILAHMSLTAPGAYLAAELILEIGYLFQDGRVDPRKK 241
V AST+LRKL+ EQYPPVTAWSAILAHMSLTAPGAYLAAELILEIGYLFQDG+VDPRKK
Sbjct: 184 VLASTVLRKLIEMEQYPPVTAWSAILAHMSLTAPGAYLAAELILEIGYLFQDGKVDPRKK 243
Query: 242 CNAPLIAMKPNTNTFNIALAGCLLFETTRKAEQLLDIMPRIGVKADSNLLIIMAHIYERN 301
CNA LIAMKPNT + NIALAGCL+F TTRKAEQLLD++PR+G+K ++ LLI MAHIYERN
Sbjct: 244 CNATLIAMKPNTTSVNIALAGCLVFGTTRKAEQLLDLIPRVGIKVNATLLITMAHIYERN 303
Query: 302 GRREELRKLQRHIDEAVNLSDIQFRQFYNCLLSCHLKFGDLNSASKMVLEMLQRAKEARN 361
GRR+EL KLQRHIDEA ++SDIQ+RQFYNCLLSCHLKFGDL+SAS MVL+ML +AKEARN
Sbjct: 304 GRRQELMKLQRHIDEAHSISDIQYRQFYNCLLSCHLKFGDLDSASDMVLKMLWKAKEARN 363
Query: 362 SLAAAMLPFNAVGVNNRTPSEQ----NVNCTNSVDLENSGIIENHILSYEDFTKDRKFVA 417
SLAAA + A ++++ EQ +VN L S ++S+ +F KDR F+
Sbjct: 364 SLAAAKFVYQA---DSKSSHEQISPDSVNHREPDGLNKSRPNRTPMISHGEFLKDRDFLK 420
Query: 418 LEAEVKRVLQTLLGMLQKQVELITTEHGILQPTEKIYIKLVKAFLEAGKTKELTHFLIKA 477
L+AE K +L +LL LQ QVELITT+ GILQPTEK+Y+KLVKAFLE+GKTKEL FL KA
Sbjct: 421 LDAEAKGLLDSLLAKLQTQVELITTDRGILQPTEKVYVKLVKAFLESGKTKELAAFLYKA 480
Query: 478 EKENLQVSHDDAALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEAN 537
EKE+ S+DD+ L HVI CISL WLDQAHDLLDEM +AGVR SSSVYASLLKAY +AN
Sbjct: 481 EKEDSPSSNDDSPLVHVINSCISLDWLDQAHDLLDEMRVAGVRMSSSVYASLLKAYCKAN 540
Query: 538 RPREVTALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEF 597
R EV ALLRDAR AGIQLD+SCY AL++S+++++DT GALHLFKEMK++KIPR+G+QEF
Sbjct: 541 RAGEVKALLRDARKAGIQLDSSCYGALIKSRVLEEDTQGALHLFKEMKDAKIPRAGNQEF 600
Query: 598 EMLVKGCAQNHEAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMR 657
EMLVKGCA + EAGL+AKLL+E++EGQ +D GVHDWN VIHFFCKKRLMQDAEKALK+MR
Sbjct: 601 EMLVKGCADDGEAGLLAKLLREIREGQTVDSGVHDWNYVIHFFCKKRLMQDAEKALKKMR 660
Query: 658 SLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVR 717
SLGH PNAQTFHSMVTGYAAIGGKY EVTELWGEMKS AS+TSM FD+ELLDSVLYTFVR
Sbjct: 661 SLGHAPNAQTFHSMVTGYAAIGGKYVEVTELWGEMKSIASATSMKFDQELLDSVLYTFVR 720
Query: 718 GGFFARANEVVAMMEEGKMFIDKYKYRTLFLKYHKTLYKGKTPKFQTEAQLKKREAALGF 777
GGFF+RANEVVAMME+ +MFIDKYKYRTLFLKYHKTLYKGK+PK QTEAQ +KREAAL F
Sbjct: 721 GGFFSRANEVVAMMEKVEMFIDKYKYRTLFLKYHKTLYKGKSPKIQTEAQARKREAALSF 780
Query: 778 KKWLGL 783
KKW+GL
Sbjct: 781 KKWVGL 786
>gi|449458514|ref|XP_004146992.1| PREDICTED: pentatricopeptide repeat-containing protein At1g03100,
mitochondrial-like [Cucumis sativus]
gi|449503826|ref|XP_004162196.1| PREDICTED: pentatricopeptide repeat-containing protein At1g03100,
mitochondrial-like [Cucumis sativus]
Length = 796
Score = 1070 bits (2767), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 517/731 (70%), Positives = 598/731 (81%), Gaps = 6/731 (0%)
Query: 57 NMQTGVLPNLNEFTYPTHPFSSMGGTILVQARDPAKLSAEIENAINEHRYGDAWKLYEQH 116
N++ VL N+ S++ ILVQARDPAKLS +I+ AI E R D WKLY+QH
Sbjct: 67 NVEPIVLGLKNKCIIDIKLLSTLSERILVQARDPAKLSMDIQTAIEEQRLNDTWKLYQQH 126
Query: 117 MQMDGFPRKTLVNKILTSFVESLDSKWLEKAYGLVEQAFEEGKQILLEKEPLIYLSLGLS 176
MQM+GFPRK++VNK+LT F E+L+ +WLEKAY LVEQAF EGKQ LLEK+PLIYLS L+
Sbjct: 127 MQMEGFPRKSVVNKLLTCFAETLEIQWLEKAYDLVEQAFAEGKQNLLEKDPLIYLSYSLA 186
Query: 177 KCGLPVPASTILRKLVATEQYPPVTAWSAILAHMSLTAPGAYLAAELILEIGYLFQDGRV 236
K GLP+PASTILR L+ E PV AWSAILAHMS T PGA+LAAELILEIGYLFQDGRV
Sbjct: 187 KLGLPIPASTILRNLIKMEHLLPVAAWSAILAHMSQTGPGAFLAAELILEIGYLFQDGRV 246
Query: 237 DPRKKCNAPLIAMKPNTNTFNIALAGCLLFETTRKAEQLLDIMPRIGVKADSNLLIIMAH 296
DPRKKCNAPLIAMKPN+ FNIAL+GC+LF TTRKAE+LLD+MPRIGVK D+NLL++M H
Sbjct: 247 DPRKKCNAPLIAMKPNSTAFNIALSGCVLFGTTRKAEELLDMMPRIGVKVDTNLLMVMVH 306
Query: 297 IYERNGRREELRKLQRHIDEAVNLSDIQFRQFYNCLLSCHLKFGDLNSASKMVLEMLQRA 356
IYERNGRREEL+KLQRHIDEA NLSD+QFRQFY+CLL+CHLKFGDL SAS MVL ML++A
Sbjct: 307 IYERNGRREELKKLQRHIDEAHNLSDVQFRQFYSCLLTCHLKFGDLESASNMVLGMLRKA 366
Query: 357 KEARNSLAAAMLPFNA----VGVNNRTPSEQNVNCTNSVDLENSGIIENHILSYEDFTKD 412
K A+NS+A A L N + ++ SE+N C N D I + ++DF D
Sbjct: 367 KIAKNSVATATLACNTAENHIKPSSGKDSEKNFICQN--DGLKDKISNGKSIFFDDFVLD 424
Query: 413 RKFVALEAEVKRVLQTLLGMLQKQVELITTEHGILQPTEKIYIKLVKAFLEAGKTKELTH 472
+ F+ L+ E K +L+TLL LQ QVEL+TTE GILQPTE I +KLV+AFLEAGKTK+L
Sbjct: 425 KNFLKLDIEAKEILRTLLTKLQLQVELVTTERGILQPTEAILVKLVRAFLEAGKTKDLAQ 484
Query: 473 FLIKAEKENLQVSHDDAALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKA 532
FLIKAE+E VS+DD+ L HVI CISLGWLDQAHDLLDEMHLAGVR SSVY SLLKA
Sbjct: 485 FLIKAEREESPVSNDDSVLVHVINACISLGWLDQAHDLLDEMHLAGVRTGSSVYGSLLKA 544
Query: 533 YIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRS 592
Y +ANR REV +LLRDAR AGIQLD+SCY+AL+ S+++Q D GAL F+EMKE+KIPRS
Sbjct: 545 YCKANRTREVASLLRDARKAGIQLDSSCYDALINSRVLQNDNKGALKFFQEMKEAKIPRS 604
Query: 593 GHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKA 652
GHQEF LV+ A+N EAGLMAKLLQE+K+GQR+D G+HDWNNVIHFFCKKRLMQDAEKA
Sbjct: 605 GHQEFRRLVEKSAENDEAGLMAKLLQEIKDGQRVDYGLHDWNNVIHFFCKKRLMQDAEKA 664
Query: 653 LKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEMKSFASSTSMNFDEELLDSVL 712
LK+MRSLGH PNAQTFHSMVTGYAAIGGKY EVTELWGEMKS AS++ + FD+ELLDSVL
Sbjct: 665 LKKMRSLGHCPNAQTFHSMVTGYAAIGGKYVEVTELWGEMKSIASASFLKFDQELLDSVL 724
Query: 713 YTFVRGGFFARANEVVAMMEEGKMFIDKYKYRTLFLKYHKTLYKGKTPKFQTEAQLKKRE 772
YTFVRGGFFARANEVV +ME+ KMFIDKYKYRTLFLKYH+TLYKGK PKFQTEAQL+KRE
Sbjct: 725 YTFVRGGFFARANEVVEVMEKDKMFIDKYKYRTLFLKYHRTLYKGKAPKFQTEAQLRKRE 784
Query: 773 AALGFKKWLGL 783
L FKKW+GL
Sbjct: 785 TTLAFKKWVGL 795
>gi|15218705|ref|NP_171809.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75200246|sp|Q9SA60.1|PPR6_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g03100, mitochondrial; Flags: Precursor
gi|4587568|gb|AAD25799.1|AC006550_7 Contains PF|00637 Clathrin 7-fold repeat. EST gb|AA721862 comes
from this gene [Arabidopsis thaliana]
gi|44917465|gb|AAS49057.1| At1g03100 [Arabidopsis thaliana]
gi|332189408|gb|AEE27529.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 793
Score = 1032 bits (2669), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 499/713 (69%), Positives = 593/713 (83%), Gaps = 6/713 (0%)
Query: 76 FSSMGGTILVQARDPAKLSAEIENAINEHRYGDAWKLYEQHMQMDGFPRKTLVNKILTSF 135
SS+ G+IL+QARDPAKL+ EI+ A++EHR +AW+L+EQHMQM+GFPRK++VN ++ F
Sbjct: 81 ISSISGSILLQARDPAKLNEEIQIAVDEHRCDEAWRLFEQHMQMEGFPRKSVVNNVVVCF 140
Query: 136 VESLDSKWLEKAYGLVEQAFEEGKQILLEKEPLIYLSLGLSKCGLPVPASTILRKLVATE 195
ESLDS WL+K Y LVEQA+EEGKQ LLEKEPL+YLSL L+K G+ VPASTILRKLV TE
Sbjct: 141 AESLDSNWLQKGYSLVEQAYEEGKQNLLEKEPLLYLSLALAKSGMAVPASTILRKLVETE 200
Query: 196 QYPPVTAWSAILAHMSLTAPGAYLAAELILEIGYLFQDGRVDPRKKCNAPLIAMKPNTNT 255
+YP V+AWSA+LAHMSL G+YL+AEL+LEIGYLF + RVDPRKK NAPL+AMKPNT
Sbjct: 201 EYPHVSAWSAVLAHMSLAGSGSYLSAELVLEIGYLFHNNRVDPRKKSNAPLLAMKPNTQV 260
Query: 256 FNIALAGCLLFETTRKAEQLLDIMPRIGVKADSNLLIIMAHIYERNGRREELRKLQRHID 315
N+ALAGCLLF TTRKAEQLLD++P+IGVKAD+NLL+IMAHIYERNGRREELRKLQRHID
Sbjct: 261 LNVALAGCLLFGTTRKAEQLLDMIPKIGVKADANLLVIMAHIYERNGRREELRKLQRHID 320
Query: 316 EAVNLSDIQFRQFYNCLLSCHLKFGDLNSASKMVLEMLQRAKEARNSLAAAMLPFNAVGV 375
EA NL++ QF QFYNCLL CHLKFGDL SASKMVLEML+R K ARNSL AA+L F+
Sbjct: 321 EACNLNESQFWQFYNCLLMCHLKFGDLESASKMVLEMLRRGKVARNSLGAAILEFDTAD- 379
Query: 376 NNRTPSEQNVNCTNSV---DLENSGIIENH-ILSYEDFTKDRKFVALEAEVKRVLQTLLG 431
+ R +++ + V D + ++ H ++ Y++F++DRKF+ LEAE K VL LL
Sbjct: 380 DGRLYTKRVSGKGSEVKEHDNPETRVVSIHSMIPYDEFSRDRKFLKLEAEAKDVLGALLA 439
Query: 432 MLQKQVELITTEHGILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAAL 491
L QVELIT+E G+LQPTE+IY+KL KAFLE+GK KEL FL+KAE E+ VS D++ L
Sbjct: 440 KLHVQVELITSERGVLQPTEEIYVKLAKAFLESGKMKELAKFLLKAEHEDSPVSSDNSML 499
Query: 492 GHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARS 551
+VI CISLG LDQAHDLLDEM +AGVR SSVY+SLLKAY N+ REVT+LLRDA+
Sbjct: 500 INVINACISLGMLDQAHDLLDEMRMAGVRTGSSVYSSLLKAYCNTNQTREVTSLLRDAQK 559
Query: 552 AGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAG 611
AGIQLD+SCYEAL+QS+++Q DT GAL++FKEMKE+KI R G+Q+FE L+KGC N EAG
Sbjct: 560 AGIQLDSSCYEALIQSQVIQNDTHGALNVFKEMKEAKILRGGNQKFEKLLKGCEGNAEAG 619
Query: 612 LMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSM 671
LM+KLL+E++E Q +D GVHDWNNVIHFF KK LMQDAEKALKRMRSLGH PNAQTFHSM
Sbjct: 620 LMSKLLREIREVQSLDAGVHDWNNVIHFFSKKGLMQDAEKALKRMRSLGHSPNAQTFHSM 679
Query: 672 VTGYAAIGGKYTEVTELWGEMKSFASST-SMNFDEELLDSVLYTFVRGGFFARANEVVAM 730
VTGYAAIG KYTEVTELWGEMKS A++T SM FD+ELLD+VLYTFVRGGFF+RANEVV M
Sbjct: 680 VTGYAAIGSKYTEVTELWGEMKSIAAATSSMKFDQELLDAVLYTFVRGGFFSRANEVVEM 739
Query: 731 MEEGKMFIDKYKYRTLFLKYHKTLYKGKTPKFQTEAQLKKREAALGFKKWLGL 783
ME+ MF+DKYKYR LFLKYHKT YKGK PK Q+E+QLKKREA L FKKWLGL
Sbjct: 740 MEKKNMFVDKYKYRMLFLKYHKTAYKGKAPKVQSESQLKKREAGLVFKKWLGL 792
>gi|242039671|ref|XP_002467230.1| hypothetical protein SORBIDRAFT_01g021710 [Sorghum bicolor]
gi|241921084|gb|EER94228.1| hypothetical protein SORBIDRAFT_01g021710 [Sorghum bicolor]
Length = 768
Score = 874 bits (2257), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 426/712 (59%), Positives = 539/712 (75%), Gaps = 15/712 (2%)
Query: 76 FSSMGGTILVQARDPAKLSAEIENAINEHRYGDAWKLYEQHMQMDGFPRKTLVNKILTSF 135
FS++ GTILVQA DP++L+ EIENAI+E R+ DAW+ Y++H+ MDG PRK++++K++T
Sbjct: 67 FSTVAGTILVQAHDPSQLALEIENAIDEQRFDDAWRAYDKHVHMDGLPRKSVLSKLITGL 126
Query: 136 VESLDSKWLEKAYGLVEQAFEEGKQILLEKEPLIYLSLGLSKCGLPVPASTILRKLVATE 195
ES D L+++Y +V AFEE KQ LL+KEPLIYLSL L++C LP A ++RKLV E
Sbjct: 127 AESCDPHRLKQSYNVVSHAFEE-KQELLDKEPLIYLSLVLARCDLPNLAINVVRKLVKME 185
Query: 196 QYPPVTAWSAILAHMSLTAPGAYLAAELILEIGYLFQDGRVDPRKKCNAPLIAMKPNTNT 255
YPPV AWSAILAHM T GA+L A+L++E+GYLFQ+ RVDPRKK N PL++MKPN+ T
Sbjct: 186 AYPPVAAWSAILAHMCQTNTGAFLGADLVMELGYLFQNNRVDPRKKSNRPLLSMKPNSFT 245
Query: 256 FNIALAGCLLFETTRKAEQLLDIMPRIGVKADSNLLIIMAHIYERNGRREELRKLQRHID 315
FNI L L+F TTRKAEQLL++MPRIGVK + NLLI+MAHIYERNGRR+E++KL+RH+D
Sbjct: 246 FNIVLTASLVFGTTRKAEQLLELMPRIGVKPEVNLLIVMAHIYERNGRRDEIQKLKRHVD 305
Query: 316 EAVNLSDIQFRQFYNCLLSCHLKFGDLNSASKMVLEMLQRAKEARNSLAAAMLPFNAVGV 375
EA LS+ +FRQFY+CLLSCHLKFGDL+ A MVL+ML++ K A+ SL AA A V
Sbjct: 306 EACGLSESEFRQFYDCLLSCHLKFGDLDHAVDMVLDMLRKGKNAKRSLEAAKAVLEA--V 363
Query: 376 NNRT---PSEQNVNCTNSVDLENSGIIENHILSYEDFTKDRKFVALEAEVKRVLQTLLGM 432
NR P E+ D EN + +LSY F KD F E + +++ L
Sbjct: 364 ENRKVYFPYEK-------TDAENPCSSNSQMLSYASFLKDNSFARFELHARELVRLLTDK 416
Query: 433 LQKQVELITTEHGILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALG 492
LQ+QV L+ +EHGIL PTE +Y KLVKAFLEA K L FL+KA KE+ VS + + +
Sbjct: 417 LQEQVGLVKSEHGILHPTETMYAKLVKAFLEADKISALVSFLVKASKEDSPVSVESSFVV 476
Query: 493 HVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYI-EANRPREVTALLRDARS 551
VI CISLG L+QAHDLLDEM +G+R SS+Y+SLLKAY E ++TALL+DA+
Sbjct: 477 QVINACISLGLLEQAHDLLDEMRFSGIRVGSSIYSSLLKAYCKEGQHEDDITALLKDAQQ 536
Query: 552 AGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAG 611
AGIQLDASCYE L+QS+ +T GALHLFKE+K + ++GH+EF+ LV+G N EA
Sbjct: 537 AGIQLDASCYEDLIQSRANHSNTTGALHLFKELKNLNVLKAGHKEFQRLVQGSDDN-EAA 595
Query: 612 LMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSM 671
LM KL++EV+ G +D VH+WNNVIHFFCKKRLM DA +AL +MR+ GH+PNAQTFHS+
Sbjct: 596 LMTKLVEEVRSGDIVDHAVHEWNNVIHFFCKKRLMHDAHRALNKMRASGHVPNAQTFHSL 655
Query: 672 VTGYAAIGGKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMM 731
+T YAAIGGKY EVT+LWGEMK ASS+SM FD+ELLDS+LY FVRGGFF RA EV+ MM
Sbjct: 656 ITAYAAIGGKYVEVTDLWGEMKLLASSSSMKFDQELLDSLLYCFVRGGFFLRAMEVIDMM 715
Query: 732 EEGKMFIDKYKYRTLFLKYHKTLYKGKTPKFQTEAQLKKREAALGFKKWLGL 783
E+ +MFIDKYKY++L+LKYH+TLYKGK PK QTEAQLK+REAA+ FKKW+GL
Sbjct: 716 EKREMFIDKYKYKSLWLKYHRTLYKGKAPKVQTEAQLKRREAAIHFKKWIGL 767
>gi|413934189|gb|AFW68740.1| hypothetical protein ZEAMMB73_971808 [Zea mays]
Length = 768
Score = 864 bits (2233), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 421/712 (59%), Positives = 536/712 (75%), Gaps = 15/712 (2%)
Query: 76 FSSMGGTILVQARDPAKLSAEIENAINEHRYGDAWKLYEQHMQMDGFPRKTLVNKILTSF 135
FS++ GTILVQA DP++L+ EIENAI++ R+ DAW+ YE+H+ MDG PRK++++K++T
Sbjct: 67 FSTVTGTILVQAHDPSQLAMEIENAIDQQRFDDAWRAYEKHVHMDGLPRKSVLSKLITGL 126
Query: 136 VESLDSKWLEKAYGLVEQAFEEGKQILLEKEPLIYLSLGLSKCGLPVPASTILRKLVATE 195
ES D WL+++Y +V AFEE KQ LL+KEPLIYLSL L+ C LP A ++RKLV E
Sbjct: 127 AESCDHHWLKQSYNVVSHAFEE-KQELLDKEPLIYLSLILAHCALPNLALNVVRKLVKME 185
Query: 196 QYPPVTAWSAILAHMSLTAPGAYLAAELILEIGYLFQDGRVDPRKKCNAPLIAMKPNTNT 255
YPPV AWSAILAHM T GA+L A+L++E+GYLFQ+ RVDPRKK N PL++MKPN+ T
Sbjct: 186 AYPPVAAWSAILAHMCQTNTGAFLGADLVMELGYLFQNNRVDPRKKSNRPLLSMKPNSFT 245
Query: 256 FNIALAGCLLFETTRKAEQLLDIMPRIGVKADSNLLIIMAHIYERNGRREELRKLQRHID 315
FNI L L+F TTRKAEQLL++MPRIGVK + NLLI+MAHIYERNGRR+E+RKL+RH+D
Sbjct: 246 FNIVLTASLVFGTTRKAEQLLELMPRIGVKPEVNLLIVMAHIYERNGRRDEIRKLKRHVD 305
Query: 316 EAVNLSDIQFRQFYNCLLSCHLKFGDLNSASKMVLEMLQRAKEARNSLAAAMLPFNAVGV 375
EA LS+ + RQFY+CLLSCHLKFGD + A MVL+M+++ K A+ SL AA A V
Sbjct: 306 EAYGLSESEVRQFYDCLLSCHLKFGDFDYAVDMVLDMIRKGKNAKRSLEAAKAVLEA--V 363
Query: 376 NNRT---PSEQNVNCTNSVDLENSGIIENHILSYEDFTKDRKFVALEAEVKRVLQTLLGM 432
NR P E+ D EN + +LS+ F KD F LE + + ++ L
Sbjct: 364 ENRKFYFPYEK-------ADAENPRSCSSQMLSHASFFKDNSFGRLELDARESVRLLTDK 416
Query: 433 LQKQVELITTEHGILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALG 492
LQ+QV L+ +EHGIL PTE +Y KLVKAFLEA K L FL+KA KE+ VS + + +
Sbjct: 417 LQEQVGLVKSEHGILHPTETMYAKLVKAFLEADKISALASFLVKASKEDSPVSVESSFVV 476
Query: 493 HVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYI-EANRPREVTALLRDARS 551
VI CISLG L+QAHDLLDEM +G+R SS+Y+SLLKAY E ++TALL+DA+
Sbjct: 477 QVINACISLGLLEQAHDLLDEMRFSGIRVGSSIYSSLLKAYCKEGQHEDDITALLKDAQQ 536
Query: 552 AGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAG 611
AGIQLD+SCYE L+QS++ +T GALHLFKE+K + ++GH EF+ +V+G N EA
Sbjct: 537 AGIQLDSSCYEDLIQSRVNHSNTTGALHLFKELKNLNVLKAGHMEFQRIVQGSDDN-EAA 595
Query: 612 LMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSM 671
LM KL++EV+ +D VH+WNNVIHFFCKKRLM DA +AL +MR+ GH+PNAQTFHS+
Sbjct: 596 LMTKLVEEVRSDHTVDHAVHEWNNVIHFFCKKRLMHDAHRALNKMRASGHVPNAQTFHSL 655
Query: 672 VTGYAAIGGKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMM 731
+T YAAIGGKY EVT+LWGEMK AS +SM FD+ELLDS+LY FVRGGFF RA EV+ MM
Sbjct: 656 ITAYAAIGGKYVEVTDLWGEMKLLASLSSMKFDQELLDSLLYCFVRGGFFLRAMEVIEMM 715
Query: 732 EEGKMFIDKYKYRTLFLKYHKTLYKGKTPKFQTEAQLKKREAALGFKKWLGL 783
E+ +MFIDKYKY++L+LKYH+TLYKGK PK QTEAQLK+REAA+ FKKW+GL
Sbjct: 716 EKREMFIDKYKYKSLWLKYHRTLYKGKAPKVQTEAQLKRREAAIRFKKWIGL 767
>gi|297727589|ref|NP_001176158.1| Os10g0422566 [Oryza sativa Japonica Group]
gi|255679411|dbj|BAH94886.1| Os10g0422566, partial [Oryza sativa Japonica Group]
Length = 788
Score = 858 bits (2218), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 424/755 (56%), Positives = 551/755 (72%), Gaps = 10/755 (1%)
Query: 31 RHQIQSARSQWLGFEPILVRCYLTYLNMQTGVL-PNLNEFTYPTHPFSSMGGTILVQARD 89
RH I +LG +C T G L LN +Y S++ TILVQA D
Sbjct: 41 RHLIGHESPHFLG-----SKCCWTNRTGAIGFLNTKLNIGSYGP-CLSTLTETILVQAHD 94
Query: 90 PAKLSAEIENAINEHRYGDAWKLYEQHMQMDGFPRKTLVNKILTSFVESLDSKWLEKAYG 149
P+ L+ EIENAI++ R+ DAW+ YE+H+ MDG PRK++++K++T F E+ D+ WL ++Y
Sbjct: 95 PSLLALEIENAIDQQRFDDAWRAYEKHIHMDGVPRKSVLSKLITGFAETCDAHWLNQSYN 154
Query: 150 LVEQAFEEGKQILLEKEPLIYLSLGLSKCGLPVPASTILRKLVATEQYPPVTAWSAILAH 209
+V AFEE K LLEKEPLI+LSL L++ LP + ++RKL+ E YPPV AWSAI+AH
Sbjct: 155 VVNHAFEE-KSKLLEKEPLIFLSLALARSSLPNLSINVVRKLIKMEAYPPVAAWSAIVAH 213
Query: 210 MSLTAPGAYLAAELILEIGYLFQDGRVDPRKKCNAPLIAMKPNTNTFNIALAGCLLFETT 269
M TA GA+LAA++++EIGYLFQ+ RVDPRKK N PL+ MKPN+ TFNI L LLF TT
Sbjct: 214 MCQTATGAFLAADMVMEIGYLFQNNRVDPRKKSNRPLLLMKPNSLTFNIILTASLLFGTT 273
Query: 270 RKAEQLLDIMPRIGVKADSNLLIIMAHIYERNGRREELRKLQRHIDEAVNLSDIQFRQFY 329
+KAEQLL++MPRIG+K D + LI+MA IYE+NG R+E++KL+RH++EA LS+ + RQFY
Sbjct: 274 KKAEQLLELMPRIGLKPDVSSLIVMARIYEQNGHRDEIQKLRRHVNEACGLSESELRQFY 333
Query: 330 NCLLSCHLKFGDLNSASKMVLEMLQRAKEARNSLAAAMLPFNAVGVNNRTPSEQNVNCTN 389
+CLLSCHLKFGDL+SA M+L+ML++ K + SL AA AV N + N
Sbjct: 334 DCLLSCHLKFGDLDSAVDMILDMLKKGKNTKRSLEAAKAVLEAVENNKIYLPYEKTKPVN 393
Query: 390 SVDLENSGIIENHILSYEDFTKDRKFVALEAEVKRVLQTLLGMLQKQVELITTEHGILQP 449
S S ++ +L+Y F KD+ F LE + + +L+ L LQ+QV L+ +E+GIL P
Sbjct: 394 SGSSNKSVCTDSQMLNYISFFKDKSFARLELDARELLKLLSDKLQEQVGLVKSEYGILYP 453
Query: 450 TEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQAHD 509
TE +Y KLVKAFLEA K L FL+KA KE+ VS + + + VI CISLGWL+QAHD
Sbjct: 454 TETMYAKLVKAFLEANKISALASFLVKASKEDSPVSVESSFVVQVINACISLGWLEQAHD 513
Query: 510 LLDEMHLAGVRASSSVYASLLKAYI-EANRPREVTALLRDARSAGIQLDASCYEALLQSK 568
LLDEM +G+R S++Y+SLLKAY E + ++ ALL+DA+ AGIQLD SCYE L+QS+
Sbjct: 514 LLDEMRFSGIRVGSTIYSSLLKAYCKEGHHEDDIAALLKDAQQAGIQLDPSCYEDLIQSR 573
Query: 569 IVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRIDC 628
+T GAL+LFKE+K I ++G EFEMLV+GC N+ A L KL++EV+ G ++
Sbjct: 574 AHHNNTTGALNLFKELKSLNILKAGQNEFEMLVQGC-NNNGAALTTKLVEEVRSGHPVNH 632
Query: 629 GVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTEL 688
+HDWNNVIHFFCKKRLM DA KAL +M++LGH PNAQTFHS+VTGYAA+GGKY EVT+L
Sbjct: 633 AIHDWNNVIHFFCKKRLMHDAHKALGKMKALGHTPNAQTFHSLVTGYAAVGGKYVEVTDL 692
Query: 689 WGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFIDKYKYRTLFL 748
WGEMK A+S+SMNFD+ELLDS+LY FVRGGFF RA EV+ MME+GKMFIDKYKY++L+L
Sbjct: 693 WGEMKVLATSSSMNFDQELLDSLLYCFVRGGFFLRAMEVIEMMEKGKMFIDKYKYKSLWL 752
Query: 749 KYHKTLYKGKTPKFQTEAQLKKREAALGFKKWLGL 783
KYH+TLYKGK PK QTEAQLK+REAAL FK+W+GL
Sbjct: 753 KYHRTLYKGKAPKVQTEAQLKRREAALHFKRWIGL 787
>gi|326516602|dbj|BAJ92456.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 775
Score = 853 bits (2204), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 413/709 (58%), Positives = 530/709 (74%), Gaps = 3/709 (0%)
Query: 76 FSSMGGTILVQARDPAKLSAEIENAINEHRYGDAWKLYEQHMQMDGFPRKTLVNKILTSF 135
FS+ T+LVQARDP+ L++EIE AI++ R+ DAW+ YE+H+ MDG PRK++++K++T F
Sbjct: 68 FSTATETVLVQARDPSLLASEIEAAIDQQRFDDAWRAYEKHLHMDGLPRKSVLSKLITGF 127
Query: 136 VESLDSKWLEKAYGLVEQAFEEGKQILLEKEPLIYLSLGLSKCGLPVPASTILRKLVATE 195
+ D+ L ++Y +V F E + LLEKE LIYLSL L++ LP A ++RKLV E
Sbjct: 128 AATCDAHRLNQSYSVVNHTFRERPE-LLEKEALIYLSLVLARYALPDLAVNVVRKLVKIE 186
Query: 196 QYPPVTAWSAILAHMSLTAPGAYLAAELILEIGYLFQDGRVDPRKKCNAPLIAMKPNTNT 255
YPPV AWSA++AHM TA G++LAA++++EIGYLFQ+ RVDPRKK N PL+AMKPN+ T
Sbjct: 187 AYPPVAAWSAVIAHMCQTATGSFLAADMVMEIGYLFQNNRVDPRKKSNRPLLAMKPNSFT 246
Query: 256 FNIALAGCLLFETTRKAEQLLDIMPRIGVKADSNLLIIMAHIYERNGRREELRKLQRHID 315
FNI L LLF TT+KAEQLL++MPRIGVK +++LL++MA IYE+NG ++E+ KL+RH+D
Sbjct: 247 FNIVLTASLLFGTTKKAEQLLELMPRIGVKPEASLLVVMARIYEKNGHKDEIHKLKRHVD 306
Query: 316 EAVNLSDIQFRQFYNCLLSCHLKFGDLNSASKMVLEMLQRAKEARNSLAAAMLPFNAVGV 375
EA LS+ +FRQ+Y+CLLSCHLKFGDL+SA MVL+ML++ A+ SL AA AV
Sbjct: 307 EACGLSESEFRQYYDCLLSCHLKFGDLDSAVDMVLDMLKKGNNAKRSLEAAKAVLEAVES 366
Query: 376 NNRTPSEQNVNCTNSVDLENSGIIENHILSYEDFTKDRKFVALEAEVKRVLQTLLGMLQK 435
N Q + NS L ++ +L+Y F KD+ F LE E + +L+ L LQ
Sbjct: 367 NKIYLPCQKADPENSGFLNKPVSTDHQMLNYASFFKDKSFARLELEARELLKLLSDKLQG 426
Query: 436 QVELITTEHGILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVI 495
QV L+ +EHG+L PTE Y KLVK FLEA K L FL+KA KE+ VS + + + VI
Sbjct: 427 QVGLVKSEHGVLHPTETTYAKLVKTFLEADKISALASFLVKASKEDSPVSVESSFVVQVI 486
Query: 496 TLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYI-EANRPREVTALLRDARSAGI 554
CISLG L+QAHDLLDEM +GVR SS+Y+SLLKAY E N ++TALL+DA+ AGI
Sbjct: 487 NACISLGLLEQAHDLLDEMRFSGVRVGSSIYSSLLKAYCKEGNHEDDITALLKDAQQAGI 546
Query: 555 QLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMA 614
QLD+SCYE L++S+ +T GALHLFKEMK S I +S ++EFEMLV+ C N+EA L A
Sbjct: 547 QLDSSCYEDLIKSRAHHNNTTGALHLFKEMKSSNIKKSVNREFEMLVQSC-DNNEAALTA 605
Query: 615 KLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTG 674
KL++EVK G ++ +HDWNNVIHFFCKKRLM DA KAL +MR LGH PNAQTFHS+VT
Sbjct: 606 KLVEEVKSGHTVNHAIHDWNNVIHFFCKKRLMHDAHKALSKMRVLGHTPNAQTFHSLVTA 665
Query: 675 YAAIGGKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEG 734
YAA+GGKY EVT+LWGEMK A+S SM FD+ELLDS+LY FVRGGFF RA EV+ +ME
Sbjct: 666 YAAVGGKYVEVTDLWGEMKVLANSNSMKFDQELLDSLLYCFVRGGFFLRAMEVIELMESS 725
Query: 735 KMFIDKYKYRTLFLKYHKTLYKGKTPKFQTEAQLKKREAALGFKKWLGL 783
K+FIDKYKY++L+LKYH+TLYKGK PK QTEAQL +REAAL FKKW+GL
Sbjct: 726 KLFIDKYKYKSLWLKYHRTLYKGKAPKVQTEAQLIRREAALRFKKWIGL 774
>gi|357140479|ref|XP_003571794.1| PREDICTED: pentatricopeptide repeat-containing protein At1g03100,
mitochondrial-like [Brachypodium distachyon]
Length = 806
Score = 849 bits (2194), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 419/709 (59%), Positives = 535/709 (75%), Gaps = 3/709 (0%)
Query: 76 FSSMGGTILVQARDPAKLSAEIENAINEHRYGDAWKLYEQHMQMDGFPRKTLVNKILTSF 135
FS+ T+LVQARD ++L+ EIENAI++ R+ DAW+ YE+H+ MDG PRK++++K++T F
Sbjct: 99 FSTTAQTVLVQARDSSQLALEIENAIDQQRFDDAWRAYEKHVHMDGLPRKSVLSKLITGF 158
Query: 136 VESLDSKWLEKAYGLVEQAFEEGKQILLEKEPLIYLSLGLSKCGLPVPASTILRKLVATE 195
+ D L ++Y +V+ AFEE K LLEKEPLIYLSL L++C LP A ++RKLV E
Sbjct: 159 AVTRDVHRLNQSYNVVDHAFEE-KHELLEKEPLIYLSLTLAQCALPNLAVNVVRKLVKME 217
Query: 196 QYPPVTAWSAILAHMSLTAPGAYLAAELILEIGYLFQDGRVDPRKKCNAPLIAMKPNTNT 255
YPPV AWS I+AHM TA GA+LAA++++EIGYLFQ+ RVDPRKK N PL++MKPN+ T
Sbjct: 218 AYPPVAAWSGIIAHMCQTANGAFLAADMVMEIGYLFQNNRVDPRKKSNRPLLSMKPNSFT 277
Query: 256 FNIALAGCLLFETTRKAEQLLDIMPRIGVKADSNLLIIMAHIYERNGRREELRKLQRHID 315
FNI L LLF TT+KAEQLL++MPRIGVK D +LLI+MA IYE+NG ++E+ KL+RH+D
Sbjct: 278 FNIVLTASLLFGTTKKAEQLLELMPRIGVKPDVSLLIVMARIYEKNGHKDEIVKLKRHVD 337
Query: 316 EAVNLSDIQFRQFYNCLLSCHLKFGDLNSASKMVLEMLQRAKEARNSLAAAMLPFNAVGV 375
EA LS+++F+QFY+CLLSCHLKFGDL+SA MVL+ML++ K A+ SL AA AV
Sbjct: 338 EACGLSELEFQQFYDCLLSCHLKFGDLDSAVDMVLDMLRKGKNAKRSLEAAKAVLEAVES 397
Query: 376 NNRTPSEQNVNCTNSVDLENSGIIENHILSYEDFTKDRKFVALEAEVKRVLQTLLGMLQK 435
+ + + NS S + SY F KD+ F LE + + +L L LQ
Sbjct: 398 SKIYLPFEKSDPENSGSPNKSVSANGQMRSYVSFFKDKSFARLELDARGLLNLLSDKLQD 457
Query: 436 QVELITTEHGILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVI 495
QV L+ +EHGIL PTE +Y KLVKAFLEA K L FL+KA KE+ VS + + + VI
Sbjct: 458 QVGLVKSEHGILHPTETMYAKLVKAFLEADKISALASFLVKASKEDSPVSVESSFVVQVI 517
Query: 496 TLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYI-EANRPREVTALLRDARSAGI 554
CIS+G L+QAHDLLDEM +G++ SS+Y+SLLKAY E + ++TALL+DA+ AGI
Sbjct: 518 NACISVGLLEQAHDLLDEMRFSGIKVGSSIYSSLLKAYCKEGHHEDDITALLKDAQQAGI 577
Query: 555 QLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMA 614
QLD+SCYE L+QS++ K+T GALHLFKEM+ SK+ +SGH+EFEMLV+ C N EA L
Sbjct: 578 QLDSSCYEDLIQSRVHHKNTAGALHLFKEMRNSKVVKSGHREFEMLVQSC-DNSEAALTT 636
Query: 615 KLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTG 674
KL++EVK G ++ +HDWNNVIHFFCKKRLM DA KAL +MR LGH PNAQTFHS+VT
Sbjct: 637 KLVEEVKSGHTVNHAIHDWNNVIHFFCKKRLMHDAHKALSKMRVLGHTPNAQTFHSLVTA 696
Query: 675 YAAIGGKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEG 734
YAAIGGKY EVT+LWGEMK A+S SM FD+ELLDS+LY FVRGGFF RA EV+ MME+
Sbjct: 697 YAAIGGKYVEVTDLWGEMKVLANSNSMKFDQELLDSLLYCFVRGGFFLRAMEVIEMMEKC 756
Query: 735 KMFIDKYKYRTLFLKYHKTLYKGKTPKFQTEAQLKKREAALGFKKWLGL 783
KMFIDKYKY++L+LKYH+T+YKGK PK QTEAQL +REAAL FK+W+GL
Sbjct: 757 KMFIDKYKYKSLWLKYHRTMYKGKAPKVQTEAQLIRREAALQFKRWIGL 805
>gi|218184544|gb|EEC66971.1| hypothetical protein OsI_33631 [Oryza sativa Indica Group]
Length = 800
Score = 817 bits (2110), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 404/729 (55%), Positives = 528/729 (72%), Gaps = 10/729 (1%)
Query: 31 RHQIQSARSQWLGFEPILVRCYLTYLNMQTGVL-PNLNEFTYPTHPFSSMGGTILVQARD 89
RH I +LG +C T G L LN +Y S++ TILVQA D
Sbjct: 32 RHLIGHESPHFLG-----SKCCWTNRTGAIGFLNTKLNIGSYGP-CLSTLTETILVQAHD 85
Query: 90 PAKLSAEIENAINEHRYGDAWKLYEQHMQMDGFPRKTLVNKILTSFVESLDSKWLEKAYG 149
P+ L+ EIENAI++ R+ DAW+ YE+H+ MDG PRK++++K++T F E+ D+ WL ++Y
Sbjct: 86 PSLLALEIENAIDQQRFDDAWRAYEKHIHMDGVPRKSVLSKLITGFAETCDAHWLNQSYN 145
Query: 150 LVEQAFEEGKQILLEKEPLIYLSLGLSKCGLPVPASTILRKLVATEQYPPVTAWSAILAH 209
+V AFEE K LLEKEPLI+LSL L++ LP + ++RKL+ E YPPV AWSAI+AH
Sbjct: 146 VVNHAFEE-KSKLLEKEPLIFLSLALARSSLPNLSINVVRKLIKMEAYPPVAAWSAIVAH 204
Query: 210 MSLTAPGAYLAAELILEIGYLFQDGRVDPRKKCNAPLIAMKPNTNTFNIALAGCLLFETT 269
M TA GA+LAA++++EIGYLFQ+ RVDPRKK N PL+ MKPN+ TFNI L LLF TT
Sbjct: 205 MCQTATGAFLAADMVMEIGYLFQNNRVDPRKKSNRPLLLMKPNSLTFNIILTASLLFGTT 264
Query: 270 RKAEQLLDIMPRIGVKADSNLLIIMAHIYERNGRREELRKLQRHIDEAVNLSDIQFRQFY 329
+KAEQLL++MPRIG+K D + LI+MA IYE+NG R+E++KL+RH++EA LS+ + RQFY
Sbjct: 265 KKAEQLLELMPRIGLKPDVSSLIVMARIYEQNGHRDEIQKLRRHVNEACGLSESELRQFY 324
Query: 330 NCLLSCHLKFGDLNSASKMVLEMLQRAKEARNSLAAAMLPFNAVGVNNRTPSEQNVNCTN 389
+CLLSCHLKFGDL+SA M+L+ML++ K + SL AA AV N + N
Sbjct: 325 DCLLSCHLKFGDLDSAVDMILDMLKKGKNTKRSLEAAKAVLEAVENNKIYLPYEKTKPVN 384
Query: 390 SVDLENSGIIENHILSYEDFTKDRKFVALEAEVKRVLQTLLGMLQKQVELITTEHGILQP 449
S S ++ +L+Y F KD+ F LE + + +L+ L LQ+QV L+ +E+GIL P
Sbjct: 385 SGSSNKSVCTDSQMLNYISFFKDKSFARLELDARELLKLLSDKLQEQVGLVKSEYGILYP 444
Query: 450 TEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQAHD 509
TE +Y KLVKAFLEA K L FL+KA KE+ VS + + + VI CISLGWL+QAHD
Sbjct: 445 TETMYAKLVKAFLEANKISALASFLVKASKEDSPVSVESSFVVQVINACISLGWLEQAHD 504
Query: 510 LLDEMHLAGVRASSSVYASLLKAYI-EANRPREVTALLRDARSAGIQLDASCYEALLQSK 568
LLDEM +G+R S++Y+SLLKAY E + ++ ALL+DA+ AGIQLD SCYE L+QS+
Sbjct: 505 LLDEMRFSGIRVGSTIYSSLLKAYCKEGHHEDDIAALLKDAQQAGIQLDPSCYEDLIQSR 564
Query: 569 IVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRIDC 628
+T GAL+LFKE+K I ++G EFEMLV+GC N+ A L KL++EV+ G ++
Sbjct: 565 AHHNNTTGALNLFKELKSLNILKAGQNEFEMLVQGC-NNNGAALTTKLVEEVRSGHPVNH 623
Query: 629 GVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTEL 688
+HDWNNVIHFFCKKRLM DA KAL +M++LGH PNAQTFHS+VTGYAA+GGKY EVT+L
Sbjct: 624 AIHDWNNVIHFFCKKRLMHDAHKALGKMKALGHTPNAQTFHSLVTGYAAVGGKYVEVTDL 683
Query: 689 WGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFIDKYKYRTLFL 748
WGEMK A+S+SMNFD+ELLDS+LY FVRGGFF RA EV+ MME+GKMFIDKYKY++L+L
Sbjct: 684 WGEMKVLATSSSMNFDQELLDSLLYCFVRGGFFLRAMEVIEMMEKGKMFIDKYKYKSLWL 743
Query: 749 KYHKTLYKG 757
KYH+TLYKG
Sbjct: 744 KYHRTLYKG 752
>gi|222612848|gb|EEE50980.1| hypothetical protein OsJ_31564 [Oryza sativa Japonica Group]
Length = 800
Score = 816 bits (2109), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 392/683 (57%), Positives = 513/683 (75%), Gaps = 3/683 (0%)
Query: 76 FSSMGGTILVQARDPAKLSAEIENAINEHRYGDAWKLYEQHMQMDGFPRKTLVNKILTSF 135
S++ TILVQA DP+ L+ EIENAI++ R+ DAW+ YE+H+ MDG PRK++++K++T F
Sbjct: 72 LSTLTETILVQAHDPSLLALEIENAIDQQRFDDAWRAYEKHIHMDGVPRKSVLSKLITGF 131
Query: 136 VESLDSKWLEKAYGLVEQAFEEGKQILLEKEPLIYLSLGLSKCGLPVPASTILRKLVATE 195
E+ D+ WL ++Y +V AFEE K LLEKEPLI+LSL L++ LP + ++RKL+ E
Sbjct: 132 AETCDAHWLNQSYNVVNHAFEE-KSKLLEKEPLIFLSLALARSSLPNLSINVVRKLIKME 190
Query: 196 QYPPVTAWSAILAHMSLTAPGAYLAAELILEIGYLFQDGRVDPRKKCNAPLIAMKPNTNT 255
YPPV AWSAI+AHM TA GA+LAA++++EIGYLFQ+ RVDPRKK N PL+ MKPN+ T
Sbjct: 191 AYPPVAAWSAIVAHMCQTATGAFLAADMVMEIGYLFQNNRVDPRKKSNRPLLLMKPNSLT 250
Query: 256 FNIALAGCLLFETTRKAEQLLDIMPRIGVKADSNLLIIMAHIYERNGRREELRKLQRHID 315
FNI L LLF TT+KAEQLL++MPRIG+K D + LI+MA IYE+NG R+E++KL+RH++
Sbjct: 251 FNIILTASLLFGTTKKAEQLLELMPRIGLKPDVSSLIVMARIYEQNGHRDEIQKLRRHVN 310
Query: 316 EAVNLSDIQFRQFYNCLLSCHLKFGDLNSASKMVLEMLQRAKEARNSLAAAMLPFNAVGV 375
EA LS+ + RQFY+CLLSCHLKFGDL+SA M+L+ML++ K + SL AA AV
Sbjct: 311 EACGLSESELRQFYDCLLSCHLKFGDLDSAVDMILDMLKKGKNTKRSLEAAKAVLEAVEN 370
Query: 376 NNRTPSEQNVNCTNSVDLENSGIIENHILSYEDFTKDRKFVALEAEVKRVLQTLLGMLQK 435
N + NS S ++ +L+Y F KD+ F LE + + +L+ L LQ+
Sbjct: 371 NKIYLPYEKTKPVNSGSSNKSVCTDSQMLNYISFFKDKSFARLELDARELLKLLSDKLQE 430
Query: 436 QVELITTEHGILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVI 495
QV L+ +E+GIL PTE +Y KLVKAFLEA K L FL+KA KE+ VS + + + VI
Sbjct: 431 QVGLVKSEYGILYPTETMYAKLVKAFLEANKISALASFLVKASKEDSPVSVESSFVVQVI 490
Query: 496 TLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYI-EANRPREVTALLRDARSAGI 554
CISLGWL+QAHDLLDEM +G+R S++Y+SLLKAY E + ++ ALL+DA+ AGI
Sbjct: 491 NACISLGWLEQAHDLLDEMRFSGIRVGSTIYSSLLKAYCKEGHHEDDIAALLKDAQQAGI 550
Query: 555 QLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMA 614
QLD SCYE L+QS+ +T GAL+LFKE+K I ++G EFEMLV+GC N+ A L
Sbjct: 551 QLDPSCYEDLIQSRAHHNNTTGALNLFKELKSLNILKAGQNEFEMLVQGC-NNNGAALTT 609
Query: 615 KLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTG 674
KL++EV+ G ++ +HDWNNVIHFFCKKRLM DA KAL +M++LGH PNAQTFHS+VTG
Sbjct: 610 KLVEEVRSGHPVNHAIHDWNNVIHFFCKKRLMHDAHKALGKMKALGHTPNAQTFHSLVTG 669
Query: 675 YAAIGGKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEG 734
YAA+GGKY EVT+LWGEMK A+S+SMNFD+ELLDS+LY FVRGGFF RA EV+ MME+G
Sbjct: 670 YAAVGGKYVEVTDLWGEMKVLATSSSMNFDQELLDSLLYCFVRGGFFLRAMEVIEMMEKG 729
Query: 735 KMFIDKYKYRTLFLKYHKTLYKG 757
KMFIDKYKY++L+LKYH+TLYKG
Sbjct: 730 KMFIDKYKYKSLWLKYHRTLYKG 752
>gi|255586271|ref|XP_002533788.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223526289|gb|EEF28601.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 689
Score = 324 bits (831), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 214/698 (30%), Positives = 352/698 (50%), Gaps = 86/698 (12%)
Query: 96 EIENAINEHRYGDAWKLYEQHMQMDGFPRKTLVNKILTSFVESLDSKWLEKAYGLVEQAF 155
++E ++ +HR +AW + + GFP+ +V ++L S D +WL+KA LV Q F
Sbjct: 67 KLEVSLKDHRLNEAWVTFNDFKTLYGFPKGYVVCRLLAELSYSSDPRWLQKACNLVSQIF 126
Query: 156 EEGKQILLEKEPLIYLSLGLSKCGLPVPASTILRKLVATEQYPPVTAWSAILAHMSLTAP 215
+E K LL E L LSL ++ +P+PAS +LR ++ E P V+ I+ HM T
Sbjct: 127 KE-KSDLLPTETLTKLSLSFARAQMPIPASMVLRVILERENTPAVSLLRLIVFHMVKTEV 185
Query: 216 GAYLAAELILEIGYLFQDGRVDPRKKCNAPLIAMKPNTNTFNIALAGCLLFETTRKAEQL 275
G LA+ +++I R+ + +A +I K +T FN+ L GC+ F+++ K ++L
Sbjct: 186 GTCLASNFLIQICECLL--RISANRNDHAKVI--KLDTLIFNLVLEGCVRFKSSLKGQEL 241
Query: 276 LDIMPRIGVKADSNLLIIMAHIYERNGRREELRKLQRHIDEAVNLSDIQFRQFYNCLLSC 335
++ M R G+ AD++ ++I+A IYE NG R+E++K + HID+ ++Q Y LL+
Sbjct: 242 VEWMSRTGIIADAHSVVIIAEIYEMNGLRDEIKKFKDHIDQVSAPFVCHYQQLYEVLLNL 301
Query: 336 HLKFGDLNSASKMVLEMLQRAKEARNSLAAAMLPFNAVGVN-NRTPSEQNVNCTNSVDLE 394
H +F DL++AS++VL+M R + G+N N+ P C S+ +
Sbjct: 302 HFEFDDLDAASELVLDM-NRFR----------------GLNPNKKPKNDQKPCLVSIGSQ 344
Query: 395 NSGIIENHILSYEDFTKDRKFVALEAEVKRVLQTLLGMLQKQ----VE----LITTEHGI 446
N L A +K +Q L +LQK+ VE L+++++G
Sbjct: 345 N----------------------LRAGLK--IQILPEVLQKESVIRVEHGKGLLSSKNGK 380
Query: 447 LQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQ 506
L + + + + G+ ELT L+ +K+ Q + + VI C LGWL+
Sbjct: 381 LLLSNRALANFIHGYKRQGRISELTKVLLSMQKD-FQTIGESSLCSDVIGACACLGWLET 439
Query: 507 AHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQ 566
AHD+LD+M AG S + Y LL AY +E AL+R R AG+ + S
Sbjct: 440 AHDILDDMETAGSPCSLTTYMVLLTAYRSREMFKEADALVRQLRKAGLIKNLSVEMVAFT 499
Query: 567 SKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRI 626
S + + D + ++ + ++QE +E + +
Sbjct: 500 SLLERADNSSSSLSKSDLADF----------------------------IIQETREEKEV 531
Query: 627 DCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVT 686
VH+ N+ I+FFCK ++M DA K ++M+ G P QTF +V GY+++G Y ++T
Sbjct: 532 TPTVHELNSSIYFFCKAKMMGDALKIYRKMQMKGIQPTVQTFAYLVYGYSSLGS-YRDIT 590
Query: 687 ELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFIDKYKYRTL 746
LWG++K + + +L + +L F+RGG+F R EV M+E KM+ DK+ Y++
Sbjct: 591 ILWGDIKRNMKNRNFLVSRDLYELLLVNFLRGGYFERVMEVAGYMKECKMYTDKWMYKSE 650
Query: 747 FLKYHKTLYKG-KTPKFQTEAQLKKREAALGFKKWLGL 783
FLK HK LYK K + E Q K+ E F+KW+G+
Sbjct: 651 FLKLHKNLYKCLKASDTRNEVQRKRLEFVQTFRKWVGI 688
>gi|449461311|ref|XP_004148385.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g17616-like [Cucumis sativus]
gi|449530891|ref|XP_004172425.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g17616-like [Cucumis sativus]
Length = 714
Score = 318 bits (816), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 212/695 (30%), Positives = 353/695 (50%), Gaps = 73/695 (10%)
Query: 93 LSAEIENAINEHRYGDAWKLYEQHMQMDGFPRKTLVNKILTSFVESLDSKWLEKAYGLVE 152
L ++E A+ +H+ +AW+L+ ++ GFP + +++ + D K L KAY LV
Sbjct: 88 LLGKLEIALKDHQIDEAWELFSDFRKLYGFPNDNFLLMLVSQLSYTSDCKRLHKAYNLVL 147
Query: 153 QAFEEGKQILLEKEPLIYLSLGLSKCGLPVPASTILRKLVATEQYPPVTAWSAILAHMSL 212
Q ++E K ++L+ + L L LGL++ +P+PAS ILR ++ T + P + ++ HM
Sbjct: 148 QNWKE-KPVVLQLDTLTKLVLGLARSQMPIPASEILRLMLQTRRLPRMELLQLVILHMVK 206
Query: 213 TAPGAYLAAELILEIGYLF---QDGRVDPRKKCNAPLIAMKPNTNTFNIALAGCLLFETT 269
+ G YLA+ ++++I F R D K +MKP+T FN+ L C+ F+ +
Sbjct: 207 SEVGTYLASNILVQICDCFLQQATSRNDQAK-------SMKPDTMLFNLVLHACVRFKLS 259
Query: 270 RKAEQLLDIMPRIGVKADSNLLIIMAHIYERNGRREELRKLQRHIDEAVNLSDIQFRQFY 329
K +QL+++M + V AD++ ++++A IYE N +R+EL+ L+ HID+ + QFY
Sbjct: 260 FKGQQLVELMSQTEVVADAHTIVLIARIYEMNDQRDELKNLKTHIDQVSPSLVCHYCQFY 319
Query: 330 NCLLSCHLKFGDLNSASKMVLEMLQRAKEARNSLAAAMLPFNAVGVNNRTPSEQNVNCTN 389
+ LLS H K+ D +SA+ ++LE+ + + N++ + R + +
Sbjct: 320 DALLSLHFKYDDFDSAANLMLEICRFGES------------NSIQKHWRELQKSSFLPIG 367
Query: 390 SVDLENSGIIENHILSYEDFTKDRKFVALEAEVKRVLQTLLGMLQKQVELITTEHGILQP 449
S L++ I+ + E +D L EVK E I ++G L
Sbjct: 368 SRHLKDGLKIK---IMPELLQRDS---VLNVEVKP-------------EFINYKNGKLVA 408
Query: 450 TEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQAHD 509
+ K K + G+T EL+ L++ +K V + V+ CI LGWL+ AHD
Sbjct: 409 SNKTVAKFIVELRRVGETSELSKLLLQVQKGLASVEGSNLC-SDVVKACICLGWLETAHD 467
Query: 510 LLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKI 569
+LD++ G S+VY LLKAY + + RE L + G+ + +
Sbjct: 468 ILDDVEAVGSPLDSTVYFLLLKAYYKQDMLREADVLQKQMTKVGLSISTT---------- 517
Query: 570 VQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRIDCG 629
++M S S +L+ L+ L+QE+KE +
Sbjct: 518 ------------EDMASSTCSSS-----RILLPNIEVATHTSLVESLIQEMKETSSMS-R 559
Query: 630 VHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELW 689
V +N+ I+FFCK ++++DA +A KRM+ LG P AQTF ++V G++ + Y +T LW
Sbjct: 560 VLKFNSSIYFFCKAKMIEDALQAYKRMQQLGIQPTAQTFANLVFGFSYL-QMYRNITILW 618
Query: 690 GEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFIDKYKYRTLFLK 749
G++K ST + +L + +L F+RGG+F R E+V MEE M+ DK Y+ FL
Sbjct: 619 GDIKRRMQSTHLVLSRDLYECLLLCFIRGGYFERVMEIVGRMEEQNMYTDKRMYKREFLM 678
Query: 750 YHKTLYKGKTP-KFQTEAQLKKREAALGFKKWLGL 783
HK LY+ P + +TEAQ K+ E FKKW+G+
Sbjct: 679 LHKNLYRSLKPSEAKTEAQKKRLEDVRAFKKWVGI 713
>gi|224126605|ref|XP_002329596.1| predicted protein [Populus trichocarpa]
gi|222870305|gb|EEF07436.1| predicted protein [Populus trichocarpa]
Length = 701
Score = 308 bits (788), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 211/719 (29%), Positives = 360/719 (50%), Gaps = 90/719 (12%)
Query: 78 SMGGTILVQARDPAKLSAEIENAINEHRYGDAWKLYEQHMQMDGFPRKTLVNKILTSFVE 137
S G I + L ++E A+ EH+ +AW + ++ GFP ++VN +++
Sbjct: 59 SQPGRICWRGSSNVVLLRKLEIALREHQVDEAWVTFIDFKKLYGFPTGSMVNMLISRLSY 118
Query: 138 SLDSKWLEKAYGLVEQAFEEGKQILLEKEPLIYLSLGLSKCGLPVPASTILRKLVATEQY 197
S D WL+KA LV +E K LL+ L LS+ L++ +PVPAS ILR ++ E
Sbjct: 119 SSDHHWLQKACDLVFLILKE-KPGLLQFPVLTKLSISLARAQMPVPASMILRVMLERENM 177
Query: 198 PPVTAWSAILAHMSLTAPGAYLAAELILEIG--YLFQDGRVDPRKKCNAPLIAMKPNTNT 255
PP+T ++++HM T GA LA+ ++++ +L + R K +KP+
Sbjct: 178 PPLTILWSVVSHMVKTEIGACLASNFLVQMCDCFLHLSAKGSVRAK------VVKPDAMI 231
Query: 256 FNIALAGCLLFETTRKAEQLLDIMPRIGVKADSNLLIIMAHIYERNGRREELRKLQRHID 315
FN+ L C+ F+++ K ++++++M + GV AD++ +II + I+E NG+R+E++KL+ H+D
Sbjct: 232 FNLVLDACVKFKSSLKGQEIVELMSKAGVIADAHSVIIFSQIHEMNGQRDEIKKLKDHVD 291
Query: 316 EAVNLSDIQFRQFYNCLLSCHLKFGDLNSASKMVLEMLQRAKEARNSLAAAMLPFNAVGV 375
E + QFY+ LL H KF D++SA++++L+M + F
Sbjct: 292 EVGAPFIGYYCQFYDSLLKLHFKFDDIDSAAQLLLDMHK---------------FQESVP 336
Query: 376 NNRTPSEQNVNCTNSVDLENSGIIENHILSYEDFTKDRKFVALEAEVKRVLQTLLGMLQK 435
N + +Q + N + E KD ++L + K
Sbjct: 337 NKKLRMDQEKRLLVPIGSNNLKTGLKIQVMPELLQKD---------------SILTVKHK 381
Query: 436 QVELITTEHGILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVI 495
Q EL+ G L + + KLV + G+T +L+ L+ +++ V + VI
Sbjct: 382 Q-ELVMFRSGKLLLSNRALAKLVNGYRRHGRTTDLSKLLL-CMQQDFHVLGQSSFCSDVI 439
Query: 496 TLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQ 555
CI LGWL+ AHD+LD+M AG S+++ +LL AY +E ALLR R AG
Sbjct: 440 DACIRLGWLEMAHDILDDMDAAGAPIGSTLHMALLTAYYCREMFKEAKALLRKMRKAGFV 499
Query: 556 LDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGC---------AQ 606
++ S EM+ C +
Sbjct: 500 VNLSD-------------------------------------EMVATACLSEAANNASSS 522
Query: 607 NHEAGLMAKLLQEVKEGQRIDCGV-HDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNA 665
+ ++ L+ L++E++E ++ V ++ N+ I++FCK ++M+DA K KRM+ + P
Sbjct: 523 SSKSDLIDFLIREMREEEKAIPSVGYELNSSIYYFCKAKMMEDALKTYKRMQHMKIQPTV 582
Query: 666 QTFHSMVTGYAAIGGKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARAN 725
QTF ++ G++++ G Y ++T LWG++K S + +L + + F+RGG+F RA
Sbjct: 583 QTFSYLIDGFSSL-GMYRDITILWGDIKRNVGSKDLEVSRDLYEVLHLNFLRGGYFERAM 641
Query: 726 EVVAMMEEGKMFIDKYKYRTLFLKYHKTLYKG-KTPKFQTEAQLKKREAALGFKKWLGL 783
EV+ M+E M+ DK+ Y+ FLK HK LY+ K + +TEAQ K+ E F+KW+G+
Sbjct: 642 EVIGYMKERNMYCDKWMYKDEFLKLHKNLYRSLKASEARTEAQSKRLEHVKAFRKWVGI 700
>gi|24059903|dbj|BAC21367.1| pentatricopeptide repeat-containing protein -like protein [Oryza
sativa Japonica Group]
gi|50509198|dbj|BAD30402.1| pentatricopeptide repeat-containing protein -like protein [Oryza
sativa Japonica Group]
gi|125600311|gb|EAZ39887.1| hypothetical protein OsJ_24325 [Oryza sativa Japonica Group]
Length = 692
Score = 281 bits (720), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 199/713 (27%), Positives = 350/713 (49%), Gaps = 73/713 (10%)
Query: 75 PFSSMGGTILV-QARDPAKLSAEIENAINEHRYGDAWKLYEQHMQMDGFPRKTLVNKILT 133
P ++ IL +A L I A+++ D + + + + G P ++++++
Sbjct: 48 PMGTIAAKILPWEAPSRETLLRTINAALDDGNVDDVLQAFANYKTLHGLPEPRVLDRMIV 107
Query: 134 SFVESLDSKWLEKAYGLVEQAFEEGKQILLEKEPLIYLSLGLSKCGLPVPASTILRKLVA 193
S + +WL++A+ +V ++ LL L+ L+L L++ +P+PAST++R ++
Sbjct: 108 SLSYASSRRWLQRAFDMVLSVYQCNGN-LLNCGSLMKLALALARDQMPIPASTVVRIILE 166
Query: 194 TEQYPPVTAWSAILAHMSLTAPGAYLAAELILEIGYLFQDGRVDPRKKCNAPLIAMKPNT 253
+ + P V + + HM + G+YLAA+++ E F + D R+ L +K N
Sbjct: 167 SGKLPDVDMLTMVYLHMVKSQVGSYLAADVLCETCECFLEQIGDRRQL--KKLDPIKSNV 224
Query: 254 NTFNIALAGCLLFETTRKAEQLLDIMPRIGVKADSNLLIIMAHIYERNGRREELRKLQRH 313
FN+ L C+ F+ KA++++++M +GV AD N + I + ++E G++ EL ++R
Sbjct: 225 TLFNMVLKSCVDFKCMIKAQRIMELMSLVGVVADVNTVAIASLVFEMVGQQVELVNMKRS 284
Query: 314 IDEAVNLSDIQ-FRQFYNCLLSCHLKFGDLNSASKMVLEMLQRAKEARNSLAAAMLPFNA 372
ID +L IQ + FY LL+ H K+ D+++A+++++++ ++ K P
Sbjct: 285 IDSFASLPFIQHYLYFYGSLLNLHFKYNDMDAAAQLLVDLYRQQK-----------PRAF 333
Query: 373 VGVNNRTPSEQNVNCTNSVDLENSGIIENHILSYEDFTKDRKFVALEAEVKRVLQTLLGM 432
VG +V+ + + + + + ++ D+ FV L+ E
Sbjct: 334 VG--------DSVHKQGVIQIGSGNLKTGFRIMFDPIKVDKGFV-LDTE----------- 373
Query: 433 LQKQVELITTEHGILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQ-VSHDDAAL 491
Q L+ G ++P+EK K + L+A K + L+ FLI KE+L+ SH D
Sbjct: 374 --SQFGLLAVIDGNIRPSEKALAKFIVGCLKASKVRALSSFLITLHKEDLKGPSHSD--- 428
Query: 492 GHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARS 551
VI+ CI +GWL AHD+LD++ A + Y SLL+AY + N+P EV L+
Sbjct: 429 --VISACILMGWLHAAHDILDDLESAEIPVLICTYMSLLRAYEKENKPEEVNRFLQ---- 482
Query: 552 AGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAG 611
Q+ Y T H P ++ +VK +
Sbjct: 483 ---QIQKKAY------------TMADFH--------TNPSFTIKDVAKIVKDEMPLRNSS 519
Query: 612 LMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSM 671
L++ L+QE++ + ++NN I FFCK +M DA KRMR P+ TF +
Sbjct: 520 LLSSLVQEIEHYSSREHLTFEFNNSILFFCKANMMDDALSTYKRMREQNVRPSLHTFCHI 579
Query: 672 VTGYAAIGGKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMM 731
+ GY+++G + E+ LWGE+K + D +LLD ++ F+ G+FAR EV++ M
Sbjct: 580 LCGYSSLG-MHREIAMLWGEIKRRLEYGELTVDRDLLDCLILNFLNAGYFARVMEVLSYM 638
Query: 732 EEGKMFIDKYKYRTLFLKYHKTLYKG-KTPKFQTEAQLKKREAALGFKKWLGL 783
KM+ DK+KY+ +FLK HK LY+ +TE Q K+ E F+ W G+
Sbjct: 639 ANRKMYCDKWKYKQVFLKLHKNLYRNLNLLHEKTEQQSKRIEDVRAFRSWAGV 691
>gi|357116839|ref|XP_003560184.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g17616-like [Brachypodium distachyon]
Length = 682
Score = 274 bits (701), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 197/711 (27%), Positives = 344/711 (48%), Gaps = 73/711 (10%)
Query: 77 SSMGGTILV-QARDPAKLSAEIENAINEHRYGDAWKLYEQHMQMDGFPRKTLVNKILTSF 135
S+ GTIL ++ L I+ A+ + A + + + + G P ++N ++ S
Sbjct: 40 STSTGTILPWESPSRETLLRTIDVALKDGNVDQALQAFGNYKSLHGLPEPRILNSVIVSL 99
Query: 136 VESLDSKWLEKAYGLVEQAFEEGKQILLEKEPLIYLSLGLSKCGLPVPASTILRKLVATE 195
+ +WL++AY +V ++ LL L+ L+L L++ PVPAS +LR ++ +
Sbjct: 100 SYTSSRRWLQRAYDMVLSVYQSNGN-LLNCSSLMRLALALARDQTPVPASAVLRIMLESG 158
Query: 196 QYPPVTAWSAILAHMSLTAPGAYLAAELILEIGYLFQDGRVDPRKKCNAPLIAMKPNTNT 255
+ P S + HM + G+YLA +++ E F D R+ L +K N
Sbjct: 159 KLPDADMLSMVFLHMLKSQVGSYLAVDVLAETCECFLHQISDRRQL--KKLDPIKNNVAL 216
Query: 256 FNIALAGCLLFETTRKAEQLLDIMPRIGVKADSNLLIIMAHIYERNGRREELRKLQRHID 315
FN+ L C+ F+ KA++++++M +GV AD N ++I + + E G+R+EL ++R I+
Sbjct: 217 FNMVLESCVNFKCMIKAQKIMELMSLVGVVADVNTMVIASRVCEMVGQRDELMSMKRSIE 276
Query: 316 EAVNLSDIQ-FRQFYNCLLSCHLKFGDLNSASKMVLEMLQRAKEARNSLAAAMLPFNAVG 374
+ Q + Q Y+ LL+ H K D+ +A+ V L R +++ S +
Sbjct: 277 SFSSSPFFQHYLQLYDSLLNLHFKCNDMEAAANFV-TALHRIQKSCVSFCDGL------- 328
Query: 375 VNNRTPSEQNVNCTNSVDLENSGIIENHILSYEDFTKDRKFVALEAEVKRVLQTLLGMLQ 434
+Q + S +L+ I D TK K +L++++
Sbjct: 329 ------QKQGMIQIGSANLKTGYRI------MFDPTKLDKGFSLDSKI------------ 364
Query: 435 KQVELITTEHGILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQ-VSHDDAALGH 493
Q L+ + G P+EK KL+ ++A K L+ F I KE+++ +S D
Sbjct: 365 -QFGLLVSIDGKFLPSEKALAKLIIGCVKAAKLNTLSMFCITLHKEDIKGISASD----- 418
Query: 494 VITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAG 553
VI CI +GWL AHD+LD + A + Y SLL+AY + +P E LL+ +
Sbjct: 419 VINACIQMGWLQAAHDILDALESAEIPVGIGTYMSLLRAYEKEQKPNEFDGLLQQIQ--- 475
Query: 554 IQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLM 613
++ +S E KD ++ + ++P++ ++ L+
Sbjct: 476 -KMASSMPEFHTSPSFTIKD-------IAKIAKDEMPQT----------------KSSLL 511
Query: 614 AKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVT 673
+ L++E + D ++NN + FFC ++M+DA KRMR PN TF ++
Sbjct: 512 SSLVEETEHYNPGDHLTFEFNNSVRFFCMAKMMEDALSTYKRMREQNIRPNLHTFCHILC 571
Query: 674 GYAAIGGKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEE 733
GY+++G + E+T LWGE+K + D +LLD ++ F++GG+F+R EV+ M
Sbjct: 572 GYSSLG-MHREITILWGEIKRRLEHGELCVDRDLLDCLVLDFLKGGYFSRVMEVINYMST 630
Query: 734 GKMFIDKYKYRTLFLKYHKTLYKG-KTPKFQTEAQLKKREAALGFKKWLGL 783
++ DK+KYR +FLK HK LY+ + +TEAQ K+ E F+ W G+
Sbjct: 631 HNVYCDKWKYRQVFLKLHKNLYRNLNSLHDKTEAQSKRIEDVQAFRSWAGI 681
>gi|413919769|gb|AFW59701.1| hypothetical protein ZEAMMB73_115574 [Zea mays]
Length = 681
Score = 271 bits (694), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 193/688 (28%), Positives = 349/688 (50%), Gaps = 72/688 (10%)
Query: 96 EIENAINEHRYGDAWKLYEQHMQMDGFPRKTLVNKILTSFVESLDSKWLEKAYGLVEQAF 155
+I A+ + +A + + ++ G P ++N I+ S +WL++A+ +V +
Sbjct: 59 KINCAMKDGNVEEALQSLSNYKKLHGLPEPRVLNSIIVSLSYMSSRRWLQRAFDMVLSVY 118
Query: 156 EEGKQILLEKEPLIYLSLGLSKCGLPVPASTILRKLVATEQYPPVTAWSAILAHMSLTAP 215
+ + LL L+ L+L L++ +P+PAST+LR ++ + + P V + HM +
Sbjct: 119 QINRN-LLNCGSLMRLALALARDQMPIPASTVLRIILESRKLPDVDMLTMSFLHMLKSQV 177
Query: 216 GAYLAAELILEIGYLFQDGRVDPRKKCNAPLIAMKPNTNTFNIALAGCLLFETTRKAEQL 275
G+YLA ++++E F D D R+ L +K N FN+ L C+ F+ KA+++
Sbjct: 178 GSYLATDVLIETCESFLDQVTDRREM--KKLDPIKNNATLFNMVLESCVTFKCIIKAQKI 235
Query: 276 LDIMPRIGVKADSNLLIIMAHIYERNGRREELRKLQRHIDEAVNLSDIQFR-QFYNCLLS 334
+++M IGV AD N +++ + ++E G+R+EL ++R ID +L+ +Q+ FY+ LLS
Sbjct: 236 MELMSLIGVVADVNTVVMASRVFEMVGQRDELIHMKRSIDSLTSLTFLQYYLHFYDSLLS 295
Query: 335 CHLKFGDLNSASKMVLEMLQRAKEARNSLAAAMLPFNAVGVNNRTPSEQNVNCTNSVDLE 394
H K+ D+++A+K ++++ Q+ K +L N + +Q++ + +
Sbjct: 296 LHFKYNDMDAAAKFLIDLHQQPK-------PGVLFCNGL-------QKQSI-----IQIG 336
Query: 395 NSGIIENHILSYEDFTKDRKFVALEAEVKRVLQTLLGMLQKQVELITTEHGILQPTEKIY 454
+ + + + ++ DR FV LG + Q L+ G L TEK
Sbjct: 337 SGNLKSGYKIMFDPKKVDRGFV-------------LGT-ESQFGLVVLTDGNLLHTEKAL 382
Query: 455 IKLVKAFLEAGKTKELTHFLIKAEKENLQ-VSHDDAALGHVITLCISLGWLDQAHDLLDE 513
KL+ +++ L++F I + + L+ +S D V+T CI +GWL AHD++D
Sbjct: 383 AKLIIGCVKSRNMHILSNFFIMSCQYGLELISPQD-----VVTACIQMGWLHAAHDIIDN 437
Query: 514 MHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQKD 573
+ AG+ + Y SLL+AY + N+ EV LL+ + +D V D
Sbjct: 438 LESAGIPVGITGYVSLLRAYEKENKSEEVNGLLQQIQKMASTMDD-----------VHTD 486
Query: 574 TPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRIDCGVHDW 633
+P ++ E+ + ++ S + L+A L E+K + +
Sbjct: 487 SPFTINNIAEVVKYEMSFSS----------------SSLVAALADEIKHYNPGEHLALEL 530
Query: 634 NNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEMK 693
NN + FFCK ++M+DA K MR P + TF M+ GY+++ + E+T LWGE+K
Sbjct: 531 NNSVLFFCKAKMMEDALCTYKCMREQNIRPTSHTFCHMLCGYSSMD-MHREITMLWGEIK 589
Query: 694 SFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFIDKYKYRTLFLKYHKT 753
++ D +LLDS++ F++GG+F+R E+++ M + ++ DK+KYR FLK HK
Sbjct: 590 RRHEYGELDLDRDLLDSLVLNFLKGGYFSRVMEIISYMSKHNIYCDKWKYRRAFLKLHKN 649
Query: 754 LYKG-KTPKFQTEAQLKKREAALGFKKW 780
LY+ + +TEAQ K+ E F+ W
Sbjct: 650 LYRNLDSLHDKTEAQSKRIEDVRAFRLW 677
>gi|356565393|ref|XP_003550925.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g17616-like [Glycine max]
Length = 684
Score = 263 bits (672), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 196/698 (28%), Positives = 341/698 (48%), Gaps = 81/698 (11%)
Query: 93 LSAEIENAINEHRYGDAWKLYEQHMQMDGFPRKTLVNKILTSFVESLDSKWLEKAYGLVE 152
L +++ A+ H+ +AW+ + + G+P LVN+++ S + W+ K LV
Sbjct: 60 LLGKLKFALRNHQVQEAWESFHDFRSLYGYPEVHLVNQLIVQLSYSSNHAWMRKTCDLVL 119
Query: 153 QAFEEGKQILLEKEPLIYLSLGLSKCGLPVPASTILRKLVATEQYPPVTAWSAILAHMSL 212
Q E K LL + L L+L L++ + PAS +LR ++ P + S ++ H++
Sbjct: 120 QIVRE-KSGLLHADTLTKLALSLARLQMTCPASVVLRLMLDKGCVPSMHLLSLVVFHIAK 178
Query: 213 TAPGAYLAAELILEIGYLFQDGRVDPRKKCNAPLIAMKPNTNTFNIALAGCLLFETTRKA 272
T G YLA+ + ++ + ++ +K +A + ++ +T FN+ L C+ F+ + K
Sbjct: 179 TEIGTYLASNYLFQVCDFYN--CLNDKKGNHA--VKVELDTLVFNLVLDACVRFKLSLKG 234
Query: 273 EQLLDIMPRIGVKADSNLLIIMAHIYERNGRREELRKLQRHIDEAVNLSDIQFRQFYNCL 332
L+++M G AD++ ++I++ I E NG R+EL++L+ HI ++ +RQFY+ L
Sbjct: 235 LSLIELMSMTGTVADAHSIVIISQILEMNGLRDELKELKDHIGRVSSVYVWHYRQFYDSL 294
Query: 333 LSCHLKFGDLNSASKMVLEMLQR-----AKEARNSLAAAMLPFNAVGVNNRTPSEQNVNC 387
LS H KF D+++A+K+VL+M KE L F A+G +P + V
Sbjct: 295 LSLHFKFNDIDAAAKLVLDMTSSHNYDVKKECEKHLQKPC--FIAIG----SPFLRTVLK 348
Query: 388 TNSVDLENSGIIENHILSYEDFTKDRKFVALEAEVKRVLQTLLGMLQKQVELITTEHGIL 447
+ IE +L + K ++ + +LI + G L
Sbjct: 349 IH---------IEPELLHKDSVLK---------------------VESRQDLIFYKGGKL 378
Query: 448 QPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQA 507
+ K + + + G+ EL+ L+ + E L + VI CI LGWL+ A
Sbjct: 379 VLSNSALAKFISGYKKYGRIGELSKLLLSIQGE-LNSVAGSSLCSDVIGACIQLGWLECA 437
Query: 508 HDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQS 567
HD+LD++ G Y L+ AY + RE ALL+ + G LD + +
Sbjct: 438 HDILDDVEATGSPMGRDTYMLLVSAYQKGGMQRETKALLKQMKKVG--LDKGLSDDAIDE 495
Query: 568 KIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVK-EGQRI 626
+ ++T +L +A L L+Q +K E Q +
Sbjct: 496 HNLCEETLNSL-----------------------------GKADLAIALVQILKDEDQTV 526
Query: 627 DCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVT 686
V++ N+ I FFCK +++DA +A +RM + P +QTF ++ GY+++ G Y E+T
Sbjct: 527 FPLVYNLNSSIFFFCKAGMIEDALRAYRRMVDMKIQPTSQTFAFLMCGYSSL-GMYREIT 585
Query: 687 ELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFIDKYKYRTL 746
LWG++K F S ++ + +L + +L F+RGG+F R EV++ M + M+ DK+ Y+
Sbjct: 586 ILWGDIKRFMRSGNLVGNRDLYELLLLNFLRGGYFERVLEVISHMRDHNMYPDKWMYKNE 645
Query: 747 FLKYHKTLYKG-KTPKFQTEAQLKKREAALGFKKWLGL 783
FL+ HK LY+ K +TEAQ K+ E F+KW+G+
Sbjct: 646 FLRLHKNLYRSLKASNTRTEAQSKRLEHVQEFRKWVGI 683
>gi|225423470|ref|XP_002274151.1| PREDICTED: pentatricopeptide repeat-containing protein At1g69290
[Vitis vinifera]
Length = 655
Score = 249 bits (636), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 128/338 (37%), Positives = 198/338 (58%), Gaps = 10/338 (2%)
Query: 450 TEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGH-VITLCISLGWLDQAH 508
+E+ Y ++VK FL+ G K+L +I+ +K D ++G+ +I+ C+SLG+LD+AH
Sbjct: 322 SEETYCEVVKGFLQNGSIKDLASLIIETQKLEPSSIAVDRSIGYGIISACVSLGFLDKAH 381
Query: 509 DLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSK 568
+LDEM++ GV VY S+LKA+ + +R E L+ + S G+QLDA Y+AL+++
Sbjct: 382 SILDEMNVQGVSVGLGVYVSILKAFCKEHRTAEAAQLVTEISSLGLQLDAGSYDALIEAS 441
Query: 569 IVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRIDC 628
+ +D A LF++M+E+++P M+ G +NH LMA L E+ E R++
Sbjct: 442 MSSQDFQSAFSLFRDMREARVPDMKGSYLTMMT-GLTENHRPELMAAFLDEIVEDPRVEV 500
Query: 629 GVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTEL 688
G HDWN++IH FCK ++DA + +RM L PN QT+ S++ GYA+ KY V L
Sbjct: 501 GTHDWNSIIHAFCKVGRLEDARRTFRRMIFLQFEPNDQTYLSLINGYAS-AEKYFSVLML 559
Query: 689 WGEMK---SFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFIDKYKYRT 745
W E+K S + FD L+D+ LY V+GGFF +VV +E K+F+DK++Y+
Sbjct: 560 WNEVKRRISIDGEKGVKFDHNLVDAFLYALVKGGFFDAVMQVVEKSQEMKIFVDKWRYKQ 619
Query: 746 LFLKYHKTLYKGKTPKFQTEAQLKKREAALGFKKWLGL 783
F++ HK L K K +K EA + FK W GL
Sbjct: 620 AFMEVHKKLKVAKVRK----RNFRKMEALIAFKNWAGL 653
>gi|186511969|ref|NP_001119002.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635613|sp|B3H672.1|PP317_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g17616
gi|332658523|gb|AEE83923.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 674
Score = 249 bits (636), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 180/694 (25%), Positives = 328/694 (47%), Gaps = 80/694 (11%)
Query: 93 LSAEIENAINEHRYGDAWKLYEQHMQMDGFPRKTLVNKILTSFVESLDSKWLEKAYGLVE 152
L ++E A+ +HR DAW +++ ++ GFP ++N+ +T S D+ WL KA L
Sbjct: 57 LKKKLETALKDHRVDDAWDVFKDFKRLYGFPESVIMNRFVTVLSYSSDAGWLCKASDLTR 116
Query: 153 QAFEEGKQILLEKEPLIYLSLGLSKCGLPVPASTILRKLVATEQYPPVTAWSAILAHMSL 212
A ++ +L + L LSL L++ + A +ILR ++ ++ HM
Sbjct: 117 LALKQNPG-MLSGDVLTKLSLSLARAQMVESACSILRIMLEKGYVLTSDVLRLVVMHMVK 175
Query: 213 TAPGAYLAAELILEIGYLFQDGRVDPRKKCNAPLIAMKPNTNTFNIALAGCLLFETTRKA 272
T G LA+ ++++ F + V R ++P +KP+T FN+ L C+ F + K
Sbjct: 176 TEIGTCLASNYLVQVCDRFVEFNVGKRN--SSPGNVVKPDTVLFNLVLGSCVRFGFSLKG 233
Query: 273 EQLLDIMPRIGVKADSNLLIIMAHIYERNGRREELRKLQRHIDEAVNLSDIQFRQFYNCL 332
++L+++M ++ V AD+ ++IM+ IYE NG R+ELRK + HI + ++ F++ L
Sbjct: 234 QELIELMAKVDVVADAYSIVIMSCIYEMNGMRDELRKFKEHIGQVPPQLLGHYQHFFDNL 293
Query: 333 LSCHLKFGDLNSASKMVLEMLQRAKEARNSLAAAMLPFNAVGVNNRTPSEQNVNCTNSVD 392
LS KF D+ SA ++ L+M + + ++ +G ++ P V
Sbjct: 294 LSLEFKFDDIGSAGRLALDMCK---------SKVLVSVENLGFDSEKPRVLPVG------ 338
Query: 393 LENSGIIENHILSYEDFTKDRKFVALEAEVKRVLQTLLGMLQKQVELITTEHGILQPTEK 452
+HI S K + ++ LG + + + + L T K
Sbjct: 339 -------SHHIRSGLKIHISPKLLQRDSS--------LG-VDTEATFVNYSNSKLGITNK 382
Query: 453 IYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQAHDLLD 512
KLV + EL+ L L VI C+++GWL+ AHD+LD
Sbjct: 383 TLAKLVYGYKRHDNLPELSKLLFSLGGSRL--------CADVIDACVAIGWLEAAHDILD 434
Query: 513 EMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQK 572
+M+ AG + Y +L Y ++ R LL+ AG+ D S E ++ + +K
Sbjct: 435 DMNSAGYPMELATYRMVLSGYYKSKMLRNAEVLLKQMTKAGLITDPS-NEIVVSPETEEK 493
Query: 573 DTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRIDCG--V 630
D+ +N E L L+QE+ G+++ +
Sbjct: 494 DS-------------------------------ENTE--LRDLLVQEINAGKQMKAPSML 520
Query: 631 HDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWG 690
++ N+ +++FCK ++ DA +++ + P Q+F ++ Y+++ G Y E+T +WG
Sbjct: 521 YELNSSLYYFCKAKMQGDALITYRKIPKMKIPPTVQSFWILIDMYSSL-GMYREITIVWG 579
Query: 691 EMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFIDKYKYRTLFLKY 750
++K +S ++ ++LL+ ++ F+RGG+F R E+++ M+E M+ D Y+ +LK
Sbjct: 580 DIKRNIASKNLKTTQDLLEKLVVNFLRGGYFERVMELISYMKENDMYNDLTMYKNEYLKL 639
Query: 751 HKTLYKG-KTPKFQTEAQLKKREAALGFKKWLGL 783
HK LY+ K TEAQ ++ E F+K +G+
Sbjct: 640 HKNLYRTLKASDAVTEAQAQRLEHVKTFRKLVGI 673
>gi|297804420|ref|XP_002870094.1| hypothetical protein ARALYDRAFT_354992 [Arabidopsis lyrata subsp.
lyrata]
gi|297315930|gb|EFH46353.1| hypothetical protein ARALYDRAFT_354992 [Arabidopsis lyrata subsp.
lyrata]
Length = 1299
Score = 246 bits (629), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 186/708 (26%), Positives = 327/708 (46%), Gaps = 90/708 (12%)
Query: 89 DPAKLSAEI----------ENAINEHRYGDAWKLYEQHMQMDGFPRKTLVNKILTSFVES 138
+PA+LS E+ E A+ +HR DAW +++ ++ GFP ++N+ +T S
Sbjct: 79 EPARLSWEVSSQVILKKKLETALKDHRVDDAWDVFKDFKRLYGFPESVIMNRFVTVLSYS 138
Query: 139 LDSKWLEKAYGLVEQAFEEGKQILLEKEPLIYLSLGLSKCGLPVPASTILRKLVATEQYP 198
DS WL KA L A ++ +L + L LSL L++ + A +ILR ++ +
Sbjct: 139 SDSGWLCKASDLTRLALKQNPG-MLSGDVLTKLSLSLARAQMVESACSILRIMLEKDFVL 197
Query: 199 PVTAWSAILAHMSLTAPGAYLAAELILEIGYLFQDGRVDPRKKCNAPLIAMKPNTNTFNI 258
++ H+ T G LA+ ++++ F + V R ++ KP+T FN+
Sbjct: 198 TSDVLRLVVMHLVKTEVGTCLASNYLVQVCDRFVELNVGKRNSSAGNVV--KPDTALFNL 255
Query: 259 ALAGCLLFETTRKAEQLLDIMPRIGVKADSNLLIIMAHIYERNGRREELRKLQRHIDEAV 318
L C+ F + K ++L+++M ++ V AD+ ++IM+ IYE NG R+ELRK + HI +
Sbjct: 256 VLGSCVRFGFSLKGQELIELMAKVDVVADAYSIVIMSCIYEMNGMRDELRKFKEHIGQVP 315
Query: 319 NLSDIQFRQFYNCLLSCHLKFGDLNSASKMVLEMLQRAKEARNSLAAAMLPFNAVGVNNR 378
+R ++ LLS KF D+ SA ++VL+M + + ++ +G ++
Sbjct: 316 PQLLCHYRHLFDNLLSLEFKFDDIRSAGRLVLDMCK---------SKDLVSVQNLGFDSE 366
Query: 379 TPSEQNVNCTNSVDLENSGIIENHILSYEDFTKDRKFVALEAEVKRVLQTLLGMLQKQVE 438
P V +HI S K + ++ LG + +
Sbjct: 367 KPRVLPVG-------------SHHIRSGLKIHISPKLLQRDSS--------LG-VDTEAT 404
Query: 439 LITTEHGILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLC 498
+ + L T K KLV EL+ L L VI C
Sbjct: 405 FVNFSNSKLGITNKTLAKLVYGHKRHDILPELSKLLFSLGGSRL--------CADVIDAC 456
Query: 499 ISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDA 558
+++ WL+ AHD+LD M AG + Y +L Y ++N R LL+ AG+ D
Sbjct: 457 VTIDWLEAAHDILDVMVSAGHPMELATYRKVLSGYYKSNMLRNAEVLLKQMTKAGLITDP 516
Query: 559 SCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQ 618
S E ++ + +KD +N E L L+Q
Sbjct: 517 S-NEIVVSPETEEKDR-------------------------------ENTE--LRDLLVQ 542
Query: 619 EVKEG--QRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYA 676
E+ G +++ +++ N+ +++FCK R+ DA +++ + P Q+F ++ Y+
Sbjct: 543 EINAGKQEKVPSMLYELNSSLYYFCKARMQGDAIITYRKIPKMKIPPTVQSFWILIDMYS 602
Query: 677 AIGGKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKM 736
++ G Y E+T +WG++K +S ++ ++LL+ ++ F+RGG+F R EV++ M+E M
Sbjct: 603 SL-GMYREITIVWGDIKRNIASKNLKVTQDLLEKLVVNFLRGGYFERVMEVISYMKENDM 661
Query: 737 FIDKYKYRTLFLKYHKTLYKG-KTPKFQTEAQLKKREAALGFKKWLGL 783
D Y+ +LK HK LY+ K TEAQ ++ E F+K +G+
Sbjct: 662 INDLTMYKNEYLKLHKNLYRTLKASDAVTEAQAQRLEHVKAFRKLVGI 709
>gi|125558409|gb|EAZ03945.1| hypothetical protein OsI_26081 [Oryza sativa Indica Group]
Length = 718
Score = 245 bits (626), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 181/666 (27%), Positives = 323/666 (48%), Gaps = 76/666 (11%)
Query: 75 PFSSMGGTIL---VQARDPAKLSAEIENAINEHRYGDAWKLYEQHMQMDGFPRKTLVNKI 131
P ++ IL V +R+ L I A+++ D + + + + G P +++++
Sbjct: 112 PMGTIAAKILPWEVPSRE--TLLRTINAALDDGNVDDVLQAFANYKTLHGLPEPRVLDRM 169
Query: 132 LTSFVESLDSKWLEKAYGLVEQAFEEGKQILLEKEPLIYLSLGLSKCGLPVPASTILRKL 191
+ S + +WL++A+ +V ++ LL L+ L+L L++ +P+PAST++R +
Sbjct: 170 IVSLSYASSRRWLQRAFDMVLSVYQCNGN-LLNCGSLMKLALALARDQMPIPASTVVRII 228
Query: 192 VATEQYPPVTAWSAILAHMSLTAPGAYLAAELILEIGYLFQDGRVDPRKKCNAPLIAMKP 251
+ + + P V + + HM + G+YLAA+++ E F + D R+ L +K
Sbjct: 229 LESGKLPDVDMLTMVYLHMVKSQVGSYLAADVLCETCECFLEQIGDRRQL--KKLDPIKS 286
Query: 252 NTNTFNIALAGCLLFETTRKAEQLLDIMPRIGVKADSNLLIIMAHIYERNGRREELRKLQ 311
N FN+ L C+ F+ KA++++++M +GV AD N + I + ++E G+R EL ++
Sbjct: 287 NVTLFNMVLKSCVDFKCMIKAQRIMELMSLVGVVADVNTVAIASLVFEMVGQRVELVNMK 346
Query: 312 RHIDEAVNLSDIQ-FRQFYNCLLSCHLKFGDLNSASKMVLEMLQRAKEARNSLAAAMLPF 370
R ID +L IQ + FY LL+ H K+ D+++A+++++++ ++ K P
Sbjct: 347 RSIDSFASLPFIQHYLYFYGSLLNLHFKYNDMDAAAQLLVDLYRQQK-----------PR 395
Query: 371 NAVGVNNRTPSEQNVNCTNSVDLENSGIIENHILSYEDFTKDRKFVALEAEVKRVLQTLL 430
VG +V+ + + + + + ++ D+ FV L+ E
Sbjct: 396 AFVG--------DSVHKQGVIQIGSGNLKTGFRIMFDPIKVDKGFV-LDTE--------- 437
Query: 431 GMLQKQVELITTEHGILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQ-VSHDDA 489
Q L+ G ++P+EK K + L+A K + L+ FLI KE+L+ SH D
Sbjct: 438 ----SQFGLLAVIDGNIRPSEKALAKFIVGCLKASKVRALSSFLITLHKEDLKGPSHSD- 492
Query: 490 ALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDA 549
VI+ CI +GWL AHD+LD++ A + Y SLL+AY + N+P EV L+
Sbjct: 493 ----VISACILMGWLHAAHDILDDLESAEIPVLICTYMSLLRAYEKENKPEEVNRFLQ-- 546
Query: 550 RSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHE 609
Q+ Y T H P ++ +VK
Sbjct: 547 -----QIQKKAY------------TMADFH--------TNPSFTIKDVAKIVKDEMPLRN 581
Query: 610 AGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFH 669
+ L++ L+QE++ + ++NN I FFCK +M DA KRMR P+ TF
Sbjct: 582 SSLLSSLVQEIEHYSSREHLTFEFNNSILFFCKANMMDDALSTYKRMREQNVRPSLHTFC 641
Query: 670 SMVTGYAAIGGKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVA 729
++ GY+++ G + E+ LWGE+K + D +LLD ++ F+ G+FAR EV++
Sbjct: 642 HILCGYSSL-GMHREIAMLWGEIKRRLEYGELTVDRDLLDCLILNFLNAGYFARVMEVLS 700
Query: 730 MMEEGK 735
M K
Sbjct: 701 YMATVK 706
>gi|359496585|ref|XP_003635270.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g17616-like, partial [Vitis vinifera]
Length = 457
Score = 240 bits (613), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 167/538 (31%), Positives = 268/538 (49%), Gaps = 89/538 (16%)
Query: 249 MKPNTNTFNIALAGCLLFETTRKAEQLLDIMPRIGVKADSNLLIIMAHIYERNGRREELR 308
+KP+T FNI L GC+ ++ K +Q++++MP++ V AD++ ++I+A I+E NG+R +L+
Sbjct: 5 IKPDTMIFNIVLDGCVRCGSSFKGQQIIELMPQVXVGADAHSIVIIAQIHEINGQRLDLK 64
Query: 309 KLQRHIDEAVNLSDIQFRQFYNCLLSCHLKFGDLNSASKMVLEMLQRAKEARNSLAAAML 368
K + HID+ +R+FY+ LLS H F D++ A+ +VL+M + R+SL+
Sbjct: 65 KFKCHIDQVSIQLLRHYRKFYDSLLSLHFTFNDIDDAAGLVLDMCR----CRDSLSI--- 117
Query: 369 PFNAVGVNNRTPSEQNVNCTNSVDLENSGIIENHILSYEDFTKDRKFVALEAEVKRVLQ- 427
+ +E C G I ++ L R+ + ++ V +LQ
Sbjct: 118 --------RKDRNESYKTCL--------GPIGSYHL--------REGLKIQI-VPELLQK 152
Query: 428 -TLLGMLQKQVELITTEHGILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSH 486
++ M KQ EL+ +G + K +KLV A+ G+ EL+ ++ +KE L
Sbjct: 153 DSVFKMDSKQ-ELVLFSNGKYVLSNKALVKLVIAYQGDGRIGELSRLMLSLQKE-LGTLE 210
Query: 487 DDAALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALL 546
+ VI CI LGWL+ AH +LD+M LAG SS Y SLL AY + RE ALL
Sbjct: 211 GGGLISDVIDACIQLGWLETAHGILDDMELAGAPIGSSTYMSLLTAYYKGKMAREAKALL 270
Query: 547 RDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQ 606
+ R AG +D S EM++ C
Sbjct: 271 KQMRKAGFVVDLS-------------------------------------DEMVMTTCLL 293
Query: 607 NHEAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQ 666
E ++ V+++N+ I+FFCK + + DA + +RM+ P Q
Sbjct: 294 GVEKTILPV--------------VYEFNSSIYFFCKAKKIDDALRIYRRMQETEIEPTVQ 339
Query: 667 TFHSMVTGYAAIGGKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANE 726
T ++V GY+ + Y E+T LWG +K S S+ +L + ++ F+RGG+F R E
Sbjct: 340 TSINLVYGYSCLN-MYREITILWGNIKRSRESGSLVVCRDLYEFLVLNFLRGGYFERVME 398
Query: 727 VVAMMEEGKMFIDKYKYRTLFLKYHKTLYKG-KTPKFQTEAQLKKREAALGFKKWLGL 783
V+ M+E M+ DK+ Y++ FLK+HK LY+ K +TEAQ K+ E F+KW G+
Sbjct: 399 VIGHMKEQNMYCDKWMYKSEFLKFHKDLYRNLKASNTRTEAQSKRLEYVEAFRKWAGI 456
>gi|449434724|ref|XP_004135146.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g69290-like [Cucumis sativus]
gi|449517162|ref|XP_004165615.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g69290-like [Cucumis sativus]
Length = 656
Score = 233 bits (594), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 126/338 (37%), Positives = 196/338 (57%), Gaps = 13/338 (3%)
Query: 451 EKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHD-DAALGH-VITLCISLGWLDQAH 508
EK Y+++VK F+++G KEL+ +I A+ NL+ S D ++G +I C+++GWLD+A
Sbjct: 325 EKTYLEMVKGFIQSGNLKELSALIIDAQ--NLESSSAVDGSIGFGIINACVNIGWLDKAQ 382
Query: 509 DLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSK 568
+LDEM+ GV VY +LKAY + +R T L+ D S+GIQLDA Y+AL+++
Sbjct: 383 YILDEMNSQGVSLGLGVYLPILKAYRKEHRTAAATQLIMDISSSGIQLDAENYDALIEAS 442
Query: 569 IVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRIDC 628
+ +D A LF+ M+E++ + ++ G +NH LMA L E+ E ++
Sbjct: 443 MSNQDFQSAFTLFRSMRETR-KSDTKASYLTIMTGLMENHRPELMAAFLDEIVEDPLVEV 501
Query: 629 GVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTEL 688
G HDWN++IH FCK ++DA + +RM+ L PN QTF S++ GY + +Y V L
Sbjct: 502 GTHDWNSIIHAFCKAGRLEDARRTYRRMKFLQFEPNEQTFLSLINGYVS-AERYFCVLML 560
Query: 689 WGEMK---SFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFIDKYKYRT 745
W E+K + + + D L+D+ LY V+GGFF +VV ++ K+FIDK+KY+
Sbjct: 561 WNELKWKVTPNGESGIKLDNNLVDAFLYALVKGGFFDAVMQVVEKTKDTKIFIDKWKYKQ 620
Query: 746 LFLKYHKTLYKGKTPKFQTEAQLKKREAALGFKKWLGL 783
F++ HK L K + KK E+ + FK W GL
Sbjct: 621 AFMETHKKLKVAKLRR----RNYKKMESLIAFKNWAGL 654
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 66/308 (21%), Positives = 128/308 (41%), Gaps = 32/308 (10%)
Query: 64 PNLNEFTYPT------HPFS-SMGGTILVQARDPAKLS----AEIENAINEH----RYGD 108
P+L F P+ PFS S T L Q P L+ A +E A+++ +
Sbjct: 22 PSLYSFLQPSLFARKRTPFSPSQDSTDLRQDPTPQNLTPDGVAVVETALHKSLLTSDTDE 81
Query: 109 AWKLYEQHMQMDGFPRKTLVNKILTSFVESLDSKWLEKAYGLVEQAFEEGKQILLEKEPL 168
AWK ++ + FP K+L N ++ D L++A+ V E+ K LL+ +
Sbjct: 82 AWKSFKLLTRSSAFPSKSLTNSLIAHLSSIGDVHNLKRAFASVVFVIEK-KPELLDFGSV 140
Query: 169 IYLSLGLSKCGLPVPASTILRKLVATEQYPPVTAWSAILAHMSLTAPGAYLAAELILEIG 228
L + PA ++++ + + P + W L + + + E
Sbjct: 141 KALLASMKCANTAAPALSLIKCMFKNRCFVPFSVWGKELVDICRQSGSLIPFLRVFEENC 200
Query: 229 YLFQDGRVDPRKKCNAPLIAMKPNTNTFNIALAGCLL-FETTRKAEQLLDIMPRIGVKAD 287
+ D R+D +KP+ N AL GC E+ AE++++ M + ++ D
Sbjct: 201 RIALDERLD----------FLKPDLIACNAALEGCCHELESVTDAEKVIETMSLLYLRPD 250
Query: 288 SNLLIIMAHIYERNGRREELRKLQRHIDE-AVNLSDIQFRQFYNCLLSCHLKFGDLNSAS 346
+A++Y G +++ +L+ + D+ F++ L+S ++ + + S
Sbjct: 251 EVSFGALAYLYALKGLDQKIIELEVLMGSFGFTCKDL----FFSNLVSGYVNASNFAAVS 306
Query: 347 KMVLEMLQ 354
K +L L+
Sbjct: 307 KTMLRSLK 314
>gi|255542030|ref|XP_002512079.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223549259|gb|EEF50748.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 650
Score = 232 bits (591), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 129/338 (38%), Positives = 189/338 (55%), Gaps = 10/338 (2%)
Query: 450 TEKIYIKLVKAFLEAGKTKELTHFLIKAEK-ENLQVSHDDAALGHVITLCISLGWLDQAH 508
E+ Y ++VK FL+ G K L + +I+A K E + D + VI C++LG D+AH
Sbjct: 317 NEETYCEVVKGFLKDGSLKGLANLIIEARKLEPDSIEIDKSISFGVINACVNLGLSDKAH 376
Query: 509 DLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSK 568
+LDEM G VY +LKAY + R E T L+ + + G+QLDA Y+AL+++
Sbjct: 377 SILDEMDAKGGSVGFGVYVPILKAYCKEGRTAEATQLVMEISNLGLQLDAGSYDALIEAS 436
Query: 569 IVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRIDC 628
+ +D A LF++M+ES+ P + ++ G +NH LMA L EV E RI+
Sbjct: 437 MTSQDFQSAFTLFRDMRESRSP-DLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRIEV 495
Query: 629 GVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTEL 688
HDWN++IH FCK ++DA++ +RM L PN QT+ S++ GY KY V L
Sbjct: 496 KTHDWNSIIHAFCKAGRLEDAKRTFRRMIFLQFEPNDQTYLSLINGYVT-AEKYFSVLML 554
Query: 689 WGEMKSFASST---SMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFIDKYKYRT 745
W E+K S+ S FD+ L+D+ LY V+GGFF +VV +E K+F+DK+KY+
Sbjct: 555 WSEIKRRVSNDKEKSFKFDQNLVDAFLYALVKGGFFDAVMQVVEKSQEMKIFVDKWKYKQ 614
Query: 746 LFLKYHKTLYKGKTPKFQTEAQLKKREAALGFKKWLGL 783
F++ HK L K K +K EA + FK W GL
Sbjct: 615 AFMETHKKLKVSKLRK----RNFRKMEALIAFKNWAGL 648
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 101/469 (21%), Positives = 195/469 (41%), Gaps = 53/469 (11%)
Query: 91 AKLSAEIENAINEHRYGDAWKLYEQHMQMDG-FPRKTLVNKILTSFVESLDSKWLEKAYG 149
A L + I N++ + AWK ++ FP K+L N ++T D+ L++A+
Sbjct: 56 ATLESTIHNSLLTNDTDQAWKSFKFLTSNSSYFPSKSLANSLITHLSSLQDTLNLKRAFA 115
Query: 150 LVEQAFEEGKQIL-LEKEPLIYLSLGLSKCGLPVPASTILRKLVATEQYPPVTAWSAILA 208
V E+ Q L E + S+ + PA +++ + + P W ++
Sbjct: 116 SVIFFMEKNPQSLDFETVQSVLESMKFANSA--APAFALVKCMFKHRYFMPFHLWGGLIG 173
Query: 209 HMSLTAPGAYLAAELILEIGYLFQDGRVDPRKKCNAPLIAMKPNTNTFNIALAGCLL-FE 267
H+S G ++A + E Y R + L MKP+ N+AL C E
Sbjct: 174 HIS-KKNGMFVAFLKVFEESY---------RIAVDEKLDFMKPDLGACNLALECCCEEIE 223
Query: 268 TTRKAEQLLDIMPRIGVKADSNLLIIMAHIYERNGRREELRKLQRHIDEAVNLSDIQFRQ 327
+ A+ +++IM +G+K D +A++Y G ++ + +L+ ++ S + R
Sbjct: 224 SVSDADNVIEIMSVLGIKPDEMSFGFLAYLYALKGLQDRIVELKSLME---GFSVLNKRL 280
Query: 328 FYNCLLSCHLKFGDLNSASKMVLEMLQRAKEARNSLAAAMLPFNAVGVNNRTPSEQNVNC 387
FY+ L+ ++K G+L S S ++ L R ++ +N +N T E
Sbjct: 281 FYSNLIRGYVKSGNLESVSATIICSL-REEDEKN-----------YNINEETYCEVVKGF 328
Query: 388 TNSVDLENSGIIENHILSYEDFTKDRKFVALEAEVKRVLQTLLGMLQKQVELITTE--HG 445
L+ + N I+ + RK E+ + + G++ V L ++ H
Sbjct: 329 LKDGSLKG---LANLII------EARKLEPDSIEIDKSIS--FGVINACVNLGLSDKAHS 377
Query: 446 ILQPTEK--------IYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITL 497
IL + +Y+ ++KA+ + G+T E T ++ E NL + D + +I
Sbjct: 378 ILDEMDAKGGSVGFGVYVPILKAYCKEGRTAEATQLVM--EISNLGLQLDAGSYDALIEA 435
Query: 498 CISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALL 546
++ A L +M + Y +++ +E +RP + A L
Sbjct: 436 SMTSQDFQSAFTLFRDMRESRSPDLKGSYLTIMTGLMENHRPELMAAFL 484
>gi|356502616|ref|XP_003520114.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g69290-like [Glycine max]
Length = 624
Score = 227 bits (579), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 119/334 (35%), Positives = 189/334 (56%), Gaps = 10/334 (2%)
Query: 454 YIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGH-VITLCISLGWLDQAHDLLD 512
+ ++VKA+ + G K L +++A+K D ++G+ ++ C+++G D+AH +LD
Sbjct: 295 FCEVVKAYFQKGNIKGLASLIVEAQKLEGSDIMIDKSIGYGIVNACVNIGLSDKAHSILD 354
Query: 513 EMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQK 572
EM+ G VY +LKAY + NR E T ++ + ++G+QLD Y+AL+++ + +
Sbjct: 355 EMNALGASVGLGVYIPILKAYCKENRTAEATQMVMEISNSGLQLDVGTYDALVEAAMCAQ 414
Query: 573 DTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRIDCGVHD 632
D A LF++M++++IP + ++ G +NH LMA L EV E RI+ G HD
Sbjct: 415 DFQSAFSLFRDMRDARIP-DLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRIEVGTHD 473
Query: 633 WNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEM 692
WN++IH FCK ++DA + +RM L PN QT+ SM+ GY + KY V LW E+
Sbjct: 474 WNSIIHAFCKAGRLEDARRTFRRMMFLQFEPNDQTYLSMINGY-VLAEKYFLVLMLWNEV 532
Query: 693 K---SFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFIDKYKYRTLFLK 749
K S + FD L+D+ LY V+GGFF +VV E ++F+DK++Y+ F++
Sbjct: 533 KRKLSLDGQKGIKFDHNLVDAFLYAMVKGGFFDAVMQVVEKAYEMRVFVDKWRYKQAFME 592
Query: 750 YHKTLYKGKTPKFQTEAQLKKREAALGFKKWLGL 783
HK L K K +K EA + FK W GL
Sbjct: 593 THKKLKVAKLRK----RNFRKMEALIAFKNWAGL 622
Score = 57.8 bits (138), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 82/450 (18%), Positives = 162/450 (36%), Gaps = 62/450 (13%)
Query: 99 NAINEHRYGDAWKLYEQHMQMDGFPRKTLVNKILTSFVESLDSKWLEKAYGLVEQAFEEG 158
N++ +AWK ++ FP KTL N +L D+ L++A+ E+
Sbjct: 69 NSLTRSNTDEAWKSFKTLTTHHSFPPKTLTNSLLIHLSSLGDTLNLKRAFASTLFLMEK- 127
Query: 159 KQILLEKEPLIYLSLGLSKCGLPVPASTILRKLVATEQYPPVTAWSAILAHMSLTAPGAY 218
+L++ L + L + PA ++R + + P W +L +S G
Sbjct: 128 NPMLIDHHTLHQILLSMRDANTAAPAFALVRCMFRNRLFVPFHVWGPVLVEISRKNNGGG 187
Query: 219 LAAELILEIGYLFQDGRVDPRKKCNAPLIAMKPNTNTFNIALAGCLLFETTRKAEQLLDI 278
L L E+ AE+++
Sbjct: 188 LGGAF----------------------------------------LRLESVSDAERVVGT 207
Query: 279 MPRIGVKADSNLLIIMAHIYERNGRREELRKLQRHIDEAVNLSDIQFRQFYNCLLSCHLK 338
M +G++ D + ++Y G E++R+L+ + + + FY L+S ++K
Sbjct: 208 MSNLGIRPDEFSFGFLGYLYALKGLEEKIRELEVLMG---GFGCLNKKWFYCSLISGYIK 264
Query: 339 FGDLNSASKMVLEMLQRAKEARNSLAAAMLPFNAVGVNNRTPSEQNVNCTNSVDLENSGI 398
GDL S V++ L ++ V + + N+ S+ I
Sbjct: 265 SGDLASVEATVVKCLGDGGGGKDWGFGVETFCEVVKAYFQ---KGNIKGLASL------I 315
Query: 399 IENHILSYEDFTKDRK--FVALEAEVKRVLQTLLGMLQKQVELITTEHGILQPTEKIYIK 456
+E L D D+ + + A V L + ++ + G+ +YI
Sbjct: 316 VEAQKLEGSDIMIDKSIGYGIVNACVNIGLSDKAHSILDEMNALGASVGL-----GVYIP 370
Query: 457 LVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQAHDLLDEMHL 516
++KA+ + +T E T +++ LQ+ D ++ + A L +M
Sbjct: 371 ILKAYCKENRTAEATQMVMEISNSGLQL--DVGTYDALVEAAMCAQDFQSAFSLFRDMRD 428
Query: 517 AGVRASSSVYASLLKAYIEANRPREVTALL 546
A + Y +++ +E +RP + A L
Sbjct: 429 ARIPDLKGSYLTIMTGLMENHRPELMAAFL 458
>gi|218189191|gb|EEC71618.1| hypothetical protein OsI_04035 [Oryza sativa Indica Group]
Length = 670
Score = 225 bits (573), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 122/334 (36%), Positives = 190/334 (56%), Gaps = 15/334 (4%)
Query: 454 YIKLVKAFLEAGKTKELTHFLIKA-EKENLQVS---HDDAALGHVITLCISLGWLDQAHD 509
Y ++ + F++ G+ +EL +IKA E E+LQ S D G ++ C+ LG L++AH
Sbjct: 346 YTEVAQCFVDNGRIRELAQLIIKAQETESLQQSLAVEDSVGFG-IVNACVELGLLNKAHS 404
Query: 510 LLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKI 569
+LDEM G VY+S+LKAY + R E L+ + +AG+QLDA Y+AL+ + +
Sbjct: 405 ILDEMTAQGASVGLGVYSSILKAYCKEQRTAEAAQLVSEISAAGLQLDAGSYDALIDASM 464
Query: 570 VQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRIDCG 629
D A LFKEM+E+++P + ++ G +N+ LMA L V + RI+
Sbjct: 465 TAHDFLSAFSLFKEMREARLP-DLRTSYLTIMTGLTENNRPELMASFLDTVVDDPRIEIA 523
Query: 630 VHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELW 689
HDWN++IH FCK ++DA + +RM L + PN QT+ S++ GY + KY V LW
Sbjct: 524 THDWNSIIHAFCKVGRLEDARRTYRRMVFLRYEPNNQTYLSLINGYVS-AEKYFSVLILW 582
Query: 690 GEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFIDKYKYRTLFLK 749
E++ +F+ EL+D+ LY V+GGFF A +V+ +E K+F+DK++++ F++
Sbjct: 583 TEVR----RKGADFNHELIDAFLYALVKGGFFDMAMQVIEKAQELKIFLDKWRHKQAFME 638
Query: 750 YHKTLYKGKTPKFQTEAQLKKREAALGFKKWLGL 783
HK L K K +K EA + FK W GL
Sbjct: 639 THKKLKVAKLRK----RNFRKMEALIAFKNWAGL 668
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 80/374 (21%), Positives = 149/374 (39%), Gaps = 65/374 (17%)
Query: 196 QYPPVTAWSAILAHMSLTAPGAYLAAELILEIGYLFQDG--RVDPRKKCNAPLIAMKPNT 253
+ P AW + L ++ GA++A L++ F + ++ +K + AM+P+
Sbjct: 180 RLPGFPAWGSPLIELTRADTGAFVA---FLKV---FDEACKQMVAEEKSPSAAAAMRPDL 233
Query: 254 NTFNIALAGCL-LFETTRKAEQLLDIMPRIGVKADSNLLIIMAHIYERNGRREELRKLQR 312
N L GC L + +AE++L+IM IGV D + +A +Y R +
Sbjct: 234 AACNAVLGGCCRLLGSVTEAERVLEIMSVIGVSPDVDSFGCLAFLY-------AWRDIPS 286
Query: 313 HIDEAVNLSD-IQFRQ--FYNCLLSCHLKFGDLNSASKMVLEMLQRAKEARNSLAAAMLP 369
+DE L D + F + F+ L+S +LK S S ++L +L+
Sbjct: 287 RVDELDKLLDALGFSKKIFFKNLISGYLKSCSFESVSSVILRVLE--------------- 331
Query: 370 FNAVGVNNRTPSEQNVNCTNSVDLENSGIIENHILSYEDFTKDRKFVALEAEVKRVLQTL 429
E+ V +N+ DLE+ + + + + + E + + Q+L
Sbjct: 332 ------------ERRVGDSNAFDLESYTEVAQCFVDNGRIRELAQLIIKAQETESLQQSL 379
Query: 430 -------LGMLQKQVE--LITTEHGILQPTEK--------IYIKLVKAFLEAGKTKELTH 472
G++ VE L+ H IL +Y ++KA+ + +T E
Sbjct: 380 AVEDSVGFGIVNACVELGLLNKAHSILDEMTAQGASVGLGVYSSILKAYCKEQRTAEAAQ 439
Query: 473 FLIKAEKENLQVSHDDAALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKA 532
+ + LQ+ D + +I ++ A L EM A + + Y +++
Sbjct: 440 LVSEISAAGLQL--DAGSYDALIDASMTAHDFLSAFSLFKEMREARLPDLRTSYLTIMTG 497
Query: 533 YIEANRPREVTALL 546
E NRP + + L
Sbjct: 498 LTENNRPELMASFL 511
>gi|125572286|gb|EAZ13801.1| hypothetical protein OsJ_03724 [Oryza sativa Japonica Group]
Length = 670
Score = 224 bits (572), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 122/334 (36%), Positives = 190/334 (56%), Gaps = 15/334 (4%)
Query: 454 YIKLVKAFLEAGKTKELTHFLIKA-EKENLQVS---HDDAALGHVITLCISLGWLDQAHD 509
Y ++ + F++ G+ +EL +IKA E E+LQ S D G ++ C+ LG L++AH
Sbjct: 346 YTEVAQRFVDNGRIRELAQLIIKAQETESLQQSLAVEDSVGFG-IVNACVELGLLNKAHS 404
Query: 510 LLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKI 569
+LDEM G VY+S+LKAY + R E L+ + +AG+QLDA Y+AL+ + +
Sbjct: 405 ILDEMTAQGASVGLGVYSSILKAYCKEQRTAEAAQLVSEISAAGLQLDAGSYDALIDASM 464
Query: 570 VQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRIDCG 629
D A LFKEM+E+++P + ++ G +N+ LMA L V + RI+
Sbjct: 465 TAHDFLSAFSLFKEMREARLP-DLRTSYLTIMTGLTENNRPELMASFLDTVVDDPRIEIA 523
Query: 630 VHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELW 689
HDWN++IH FCK ++DA + +RM L + PN QT+ S++ GY + KY V LW
Sbjct: 524 THDWNSIIHAFCKVGRLEDARRTYRRMVFLRYEPNNQTYLSLINGYVS-AEKYFSVLILW 582
Query: 690 GEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFIDKYKYRTLFLK 749
E++ +F+ EL+D+ LY V+GGFF A +V+ +E K+F+DK++++ F++
Sbjct: 583 TEVR----RKGADFNHELIDAFLYALVKGGFFDMAMQVIEKAQELKIFLDKWRHKQAFME 638
Query: 750 YHKTLYKGKTPKFQTEAQLKKREAALGFKKWLGL 783
HK L K K +K EA + FK W GL
Sbjct: 639 THKKLKVAKLRK----RNFRKMEALIAFKNWAGL 668
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 75/372 (20%), Positives = 144/372 (38%), Gaps = 62/372 (16%)
Query: 196 QYPPVTAWSAILAHMSLTAPGAYLAAELILEIGYLFQDGRVDPRKKCNAPLIAMKPNTNT 255
+ P W + L ++ GA++A + + + + +K + AM+P+
Sbjct: 181 RLPAFPVWGSPLIELTRADTGAFVAFLKVFD-----EACKQMVSEKSPSAAAAMRPDLAA 235
Query: 256 FNIALAGCL-LFETTRKAEQLLDIMPRIGVKADSNLLIIMAHIYERNGRREELRKLQRHI 314
N L GC L + +AE++L+IM I V D + +A +Y R + +
Sbjct: 236 CNAVLGGCCRLLGSVTEAERVLEIMSAIAVSPDVDSFGCLAFLY-------AWRDIPSRV 288
Query: 315 DEAVNLSD-IQF--RQFYNCLLSCHLKFGDLNSASKMVLEMLQRAKEARNSLAAAMLPFN 371
DE L D + F + F+ L+S +LK S S ++L +++
Sbjct: 289 DELDKLLDALGFGKKIFFKNLISGYLKSCSFESVSSVILRVVE----------------- 331
Query: 372 AVGVNNRTPSEQNVNCTNSVDLENSGIIENHILSYEDFTKDRKFVALEAEVKRVLQTL-- 429
E+ V +N+ DLE+ + + + + + E + + Q+L
Sbjct: 332 ----------ERRVGGSNAFDLESYTEVAQRFVDNGRIRELAQLIIKAQETESLQQSLAV 381
Query: 430 -----LGMLQKQVE--LITTEHGILQPTEK--------IYIKLVKAFLEAGKTKELTHFL 474
G++ VE L+ H IL +Y ++KA+ + +T E +
Sbjct: 382 EDSVGFGIVNACVELGLLNKAHSILDEMTAQGASVGLGVYSSILKAYCKEQRTAEAAQLV 441
Query: 475 IKAEKENLQVSHDDAALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYI 534
+ LQ+ D + +I ++ A L EM A + + Y +++
Sbjct: 442 SEISAAGLQL--DAGSYDALIDASMTAHDFLSAFSLFKEMREARLPDLRTSYLTIMTGLT 499
Query: 535 EANRPREVTALL 546
E NRP + + L
Sbjct: 500 ENNRPELMASFL 511
>gi|297738088|emb|CBI27289.3| unnamed protein product [Vitis vinifera]
Length = 967
Score = 224 bits (572), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 114/300 (38%), Positives = 179/300 (59%), Gaps = 6/300 (2%)
Query: 450 TEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGH-VITLCISLGWLDQAH 508
+E+ Y ++VK FL+ G K+L +I+ +K D ++G+ +I+ C+SLG+LD+AH
Sbjct: 322 SEETYCEVVKGFLQNGSIKDLASLIIETQKLEPSSIAVDRSIGYGIISACVSLGFLDKAH 381
Query: 509 DLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSK 568
+LDEM++ GV VY S+LKA+ + +R E L+ + S G+QLDA Y+AL+++
Sbjct: 382 SILDEMNVQGVSVGLGVYVSILKAFCKEHRTAEAAQLVTEISSLGLQLDAGSYDALIEAS 441
Query: 569 IVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRIDC 628
+ +D A LF++M+E+++P M+ G +NH LMA L E+ E R++
Sbjct: 442 MSSQDFQSAFSLFRDMREARVPDMKGSYLTMMT-GLTENHRPELMAAFLDEIVEDPRVEV 500
Query: 629 GVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTEL 688
G HDWN++IH FCK ++DA + +RM L PN QT+ S++ GYA+ KY V L
Sbjct: 501 GTHDWNSIIHAFCKVGRLEDARRTFRRMIFLQFEPNDQTYLSLINGYAS-AEKYFSVLML 559
Query: 689 WGEMK---SFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFIDKYKYRT 745
W E+K S + FD L+D+ LY V+GGFF +VV +E K+F+DK++ T
Sbjct: 560 WNEVKRRISIDGEKGVKFDHNLVDAFLYALVKGGFFDAVMQVVEKSQEMKIFVDKWRKDT 619
Score = 73.2 bits (178), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 102/506 (20%), Positives = 192/506 (37%), Gaps = 79/506 (15%)
Query: 63 LPNLNEFTYPTHPFSSMGGTILVQARDPAKLSAEIENAINEHRYGDAWKLYEQHMQMDGF 122
+P+ +PT P +Q+ P L + + +++ + +AWK ++ F
Sbjct: 41 IPSAPRSPHPTSPKP-------LQSPAPEDLESALHTSLSTNNTDEAWKSFKALTTNSTF 93
Query: 123 PRKTLVNKILTSFVESLDSKWLEKAYGLVEQAFEEGKQILLEKEPLIYLSLG-------- 174
P K+L N ++ D L++A+ LLEK P + L G
Sbjct: 94 PSKSLANSLIAHLASLHDLYNLKRAFA--------SAVFLLEKNPSL-LDFGTVRTLLGS 144
Query: 175 LSKCGLPVPASTILRKLVATEQYPPVTAWSAILAHMSLTAPGAYLAAELILEIGYLFQDG 234
++ PA ++ + + P + W ++ ++ + E + D
Sbjct: 145 MNSANTAAPAFALINCMFKNRYFMPFSMWGGVIVEITRRNRSFVAFLRVFNETCRIAIDE 204
Query: 235 RVDPRKKCNAPLIAMKPNTNTFNIALAGCLL-FETTRKAEQLLDIMPRIGVKADSNLLII 293
+++ +MKP+ + N+AL GC E+ +AE+++++M +G++ D +
Sbjct: 205 KLE----------SMKPDLDACNVALEGCSQDLESVSEAEKVVEMMSVLGIQPDESSFGF 254
Query: 294 MAHIYERNGRRE---ELRKLQRHIDEAVNLSDIQFRQFYNCLLSCHLKFGDLNSASKMVL 350
+A++Y G E EL L R + + Y+ L++ ++K G+L S+ +
Sbjct: 255 LAYLYALKGLEEKIVELEGLMRGFGFSSK------KVIYSYLINAYVKSGNLEYVSRTIF 308
Query: 351 EMLQRAKEARNSLAAAMLPFNAVGVNNRTPSEQNVNCTNSVDLENSGIIENHILSYEDFT 410
L+ E + + G QN + + L IIE L
Sbjct: 309 RSLREDDEQGPNFSEETYCEVVKGF------LQNGSIKDLASL----IIETQKLEPSSIA 358
Query: 411 KDRK--FVALEAEVKRVLQTLLGMLQKQVELITTEHGILQPTE--------KIYIKLVKA 460
DR + + A V LG L K H IL +Y+ ++KA
Sbjct: 359 VDRSIGYGIISACVS------LGFLDKA-------HSILDEMNVQGVSVGLGVYVSILKA 405
Query: 461 FLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQAHDLLDEMHLAGVR 520
F + +T E + + LQ+ D + +I +S A L +M A V
Sbjct: 406 FCKEHRTAEAAQLVTEISSLGLQL--DAGSYDALIEASMSSQDFQSAFSLFRDMREARVP 463
Query: 521 ASSSVYASLLKAYIEANRPREVTALL 546
Y +++ E +RP + A L
Sbjct: 464 DMKGSYLTMMTGLTENHRPELMAAFL 489
>gi|115440409|ref|NP_001044484.1| Os01g0788900 [Oryza sativa Japonica Group]
gi|20160827|dbj|BAB89767.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|20161191|dbj|BAB90118.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113534015|dbj|BAF06398.1| Os01g0788900 [Oryza sativa Japonica Group]
gi|215740585|dbj|BAG97241.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 670
Score = 224 bits (572), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 122/334 (36%), Positives = 190/334 (56%), Gaps = 15/334 (4%)
Query: 454 YIKLVKAFLEAGKTKELTHFLIKA-EKENLQVS---HDDAALGHVITLCISLGWLDQAHD 509
Y ++ + F++ G+ +EL +IKA E E+LQ S D G ++ C+ LG L++AH
Sbjct: 346 YTEVAQRFVDNGRIRELAQLIIKAQETESLQQSLAVEDSVGFG-IVNACVELGLLNKAHS 404
Query: 510 LLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKI 569
+LDEM G VY+S+LKAY + R E L+ + +AG+QLDA Y+AL+ + +
Sbjct: 405 ILDEMTAQGASVGLGVYSSILKAYCKEQRTAEAAQLVSEISAAGLQLDAGSYDALIDASM 464
Query: 570 VQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRIDCG 629
D A LFKEM+E+++P + ++ G +N+ LMA L V + RI+
Sbjct: 465 TAHDFLSAFSLFKEMREARLP-DLRTSYLTIMTGLTENNRPELMASFLDTVVDDPRIEIA 523
Query: 630 VHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELW 689
HDWN++IH FCK ++DA + +RM L + PN QT+ S++ GY + KY V LW
Sbjct: 524 THDWNSIIHAFCKVGRLEDARRTYRRMVFLRYEPNNQTYLSLINGYVS-AEKYFSVLILW 582
Query: 690 GEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFIDKYKYRTLFLK 749
E++ +F+ EL+D+ LY V+GGFF A +V+ +E K+F+DK++++ F++
Sbjct: 583 TEVR----RKGADFNHELIDAFLYALVKGGFFDMAMQVIEKAQELKIFLDKWRHKQAFME 638
Query: 750 YHKTLYKGKTPKFQTEAQLKKREAALGFKKWLGL 783
HK L K K +K EA + FK W GL
Sbjct: 639 THKKLKVAKLRK----RNFRKMEALIAFKNWAGL 668
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 75/372 (20%), Positives = 144/372 (38%), Gaps = 62/372 (16%)
Query: 196 QYPPVTAWSAILAHMSLTAPGAYLAAELILEIGYLFQDGRVDPRKKCNAPLIAMKPNTNT 255
+ P W + L ++ GA++A + + + + +K + AM+P+
Sbjct: 181 RLPAFPVWGSPLIELTRADTGAFVAFLKVFD-----EACKQMVSEKSPSAAAAMRPDLAA 235
Query: 256 FNIALAGCL-LFETTRKAEQLLDIMPRIGVKADSNLLIIMAHIYERNGRREELRKLQRHI 314
N L GC L + +AE++L+IM I V D + +A +Y R + +
Sbjct: 236 CNAVLGGCCRLLGSVTEAERVLEIMSAIAVSPDVDSFGCLAFLY-------AWRDIPSRV 288
Query: 315 DEAVNLSD-IQF--RQFYNCLLSCHLKFGDLNSASKMVLEMLQRAKEARNSLAAAMLPFN 371
DE L D + F + F+ L+S +LK S S ++L +++
Sbjct: 289 DELDKLLDALGFGKKIFFKNLISGYLKSCSFESVSSVILRVVE----------------- 331
Query: 372 AVGVNNRTPSEQNVNCTNSVDLENSGIIENHILSYEDFTKDRKFVALEAEVKRVLQTL-- 429
E+ V +N+ DLE+ + + + + + E + + Q+L
Sbjct: 332 ----------ERRVGGSNAFDLESYTEVAQRFVDNGRIRELAQLIIKAQETESLQQSLAV 381
Query: 430 -----LGMLQKQVE--LITTEHGILQPTEK--------IYIKLVKAFLEAGKTKELTHFL 474
G++ VE L+ H IL +Y ++KA+ + +T E +
Sbjct: 382 EDSVGFGIVNACVELGLLNKAHSILDEMTAQGASVGLGVYSSILKAYCKEQRTAEAAQLV 441
Query: 475 IKAEKENLQVSHDDAALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYI 534
+ LQ+ D + +I ++ A L EM A + + Y +++
Sbjct: 442 SEISAAGLQL--DAGSYDALIDASMTAHDFLSAFSLFKEMREARLPDLRTSYLTIMTGLT 499
Query: 535 EANRPREVTALL 546
E NRP + + L
Sbjct: 500 ENNRPELMASFL 511
>gi|414880174|tpg|DAA57305.1| TPA: hypothetical protein ZEAMMB73_061992 [Zea mays]
Length = 680
Score = 221 bits (564), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 116/336 (34%), Positives = 190/336 (56%), Gaps = 13/336 (3%)
Query: 451 EKIYIKLVKAFLEAGKTKELTHFLIKAEKENL---QVSHDDAALGHVITLCISLGWLDQA 507
E+ Y ++ + F++ + +EL +I+A + L +S +D+ ++ C+ LG L++A
Sbjct: 353 EETYTEVAQCFVDRARIRELAQLIIQAHEIELAQQSISVEDSVGFGIVNACVELGLLNKA 412
Query: 508 HDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQS 567
H +LDEM G VY+S+LKAY + + E L+ + +AG+QLDA Y+AL+ +
Sbjct: 413 HSILDEMTAQGASVGLGVYSSILKAYCKEQKTAEAAQLVAEISAAGLQLDAGSYDALIDA 472
Query: 568 KIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRID 627
+ D A LFK+M+E+++P + ++ G +N++ GLMA L V + RI+
Sbjct: 473 SMTAHDFQSAFALFKDMREARLPEL-RTSYLTIMTGLTENNKPGLMASFLDSVVDDPRIE 531
Query: 628 CGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTE 687
HDWN++IH FCK + DA + +RM L PN QT+ S++ GY + KY V
Sbjct: 532 IATHDWNSIIHAFCKVGRLDDARRTYRRMVFLRFEPNNQTYLSLINGYVST-EKYFSVLI 590
Query: 688 LWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFIDKYKYRTLF 747
LW E++ + F+ EL+D+ LY V+GGFF A +V+ +E K+FIDK++Y+ F
Sbjct: 591 LWTEVR----RRGIEFNHELIDAFLYALVKGGFFDMAMQVIEKAQEFKIFIDKWRYKQAF 646
Query: 748 LKYHKTLYKGKTPKFQTEAQLKKREAALGFKKWLGL 783
++ HK L K K +K EA + F+ W G+
Sbjct: 647 METHKKLKVAKLRK----RNFRKMEALVAFRNWAGI 678
>gi|357487645|ref|XP_003614110.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355515445|gb|AES97068.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 664
Score = 221 bits (562), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 116/331 (35%), Positives = 190/331 (57%), Gaps = 10/331 (3%)
Query: 457 LVKAFLEAGKTKELTHFLIKAEK-ENLQVSHDDAALGHVITLCISLGWLDQAHDLLDEMH 515
+VK +L G K L + +I+A+K E+ + D++ ++ C+S+G D+AH++LDEM+
Sbjct: 338 VVKEYLHKGNIKGLANLIIEAQKLESSNIKVDESIGFGIVNACVSIGLSDKAHNILDEMN 397
Query: 516 LAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQKDTP 575
G VY +LKAY + NR E + L+ + S+G++LD Y+AL+++ + +D
Sbjct: 398 ALGGSVGLGVYVPILKAYCKENRTAEASLLVTEISSSGLKLDVETYDALIETSMSGQDFQ 457
Query: 576 GALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRIDCGVHDWNN 635
LF++M+ +++ + ++ G +NH LMA L EV E RI+ G HDWN+
Sbjct: 458 SVFSLFRDMRGARV-LDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRIEVGTHDWNS 516
Query: 636 VIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEMK-- 693
+IH FCK ++DA + +RM L PN QT+ S++ GY + KY +V LW E+K
Sbjct: 517 IIHAFCKAGRLEDARRTFRRMTFLQFEPNDQTYLSLINGYVS-AEKYFDVMMLWNEVKRK 575
Query: 694 -SFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFIDKYKYRTLFLKYHK 752
+ + FD+ L+D+ LY V+GGFF +VV +E K+F+DK++Y+ F++ HK
Sbjct: 576 LAGDGPKGIKFDQNLVDAFLYAMVKGGFFDAVMQVVEKSKEMKIFVDKWRYKQAFMETHK 635
Query: 753 TLYKGKTPKFQTEAQLKKREAALGFKKWLGL 783
L + K ++K EA + FK W GL
Sbjct: 636 KLKVARLRK----KNVRKMEALIAFKNWAGL 662
Score = 56.2 bits (134), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 102/461 (22%), Positives = 180/461 (39%), Gaps = 62/461 (13%)
Query: 108 DAWKLYEQHMQMDGFPRKTLVNKILTSFVESLDSKWLEKAYGLVEQAFEEGKQI-LLEKE 166
+AWK ++ FP K L N +LT + SL L F K LLE
Sbjct: 84 EAWKSFKTLTTHHSFPPKPLTNSLLTH-LSSLPDNILNLKRAFASTLFLIQKHPNLLEFN 142
Query: 167 PLIYLSLGLSKCGLPVPASTILRKLVATEQYPPVTAWSAILAHMSLTAPGAYLAAELILE 226
+ + L + PA +++R + + P W +L ++ LAA L L
Sbjct: 143 TIHAILLSIKSANTAPPAFSLVRSMFKYRFFIPFHLWGGVLVDIARNNDN--LAAFLPL- 199
Query: 227 IGYLFQDGRVDPRKKCNAPLIAMKPNTNTFNIAL-AGCLLFETTRKAEQLLDIMPRIGVK 285
F++ + R + L M P+ + N AL A C ++ A ++++IM ++GVK
Sbjct: 200 ----FEE---NCRVAFDEKLEFMIPDVASCNAALEACCFCLQSVTDANRVVEIMSKLGVK 252
Query: 286 ADSNLLIIMAHIYERNGRREELRKLQRHIDE-AVNLSDIQFRQ----FYNCLLSCHLKFG 340
D +A++Y L+ LQ IDE V + + + FY+ L+S ++K
Sbjct: 253 PDVFSFGFLAYLY-------ALKGLQDKIDELKVLMVGFGYSKNNKCFYSNLISGYVKSA 305
Query: 341 DLNSASKMVLEMLQ-RAKEA------RNSLAAAMLPF----NAVGVNNRTPSEQNVNCTN 389
+L S +L L R E R++ + + N G+ N Q + +N
Sbjct: 306 NLVSVESTILSSLNDRDDEGEVWSFDRDTFCLVVKEYLHKGNIKGLANLIIEAQKLESSN 365
Query: 390 SVDLENSGI-IENHILSYEDFTKDRKFVALEAEVKRVLQTLLGMLQKQVELITTEHGILQ 448
E+ G I N +S + L + +L + L V L
Sbjct: 366 IKVDESIGFGIVNACVS----------IGLSDKAHNILDE-MNALGGSVGL--------- 405
Query: 449 PTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQAH 508
+Y+ ++KA+ + +T E + + + L++ D +I +S
Sbjct: 406 ---GVYVPILKAYCKENRTAEASLLVTEISSSGLKL--DVETYDALIETSMSGQDFQSVF 460
Query: 509 DLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDA 549
L +M A V Y +++ +E +RP + A L +
Sbjct: 461 SLFRDMRGARVLDLKGSYLTIMTGLMENHRPELMAAFLDEV 501
>gi|357487751|ref|XP_003614163.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355515498|gb|AES97121.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 660
Score = 220 bits (560), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 116/331 (35%), Positives = 189/331 (57%), Gaps = 10/331 (3%)
Query: 457 LVKAFLEAGKTKELTHFLIKAEK-ENLQVSHDDAALGHVITLCISLGWLDQAHDLLDEMH 515
+VK +L G K L + +I+A+K E+ + D++ ++ C+S+G D+AH +LDEM+
Sbjct: 334 VVKEYLHKGNIKGLANLIIEAQKLESSNIKVDESIGFGIVNACVSIGLSDKAHSILDEMN 393
Query: 516 LAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQKDTP 575
G VY +LKAY + NR E + L+ + S+G++LD Y+AL+++ + +D
Sbjct: 394 ALGGSVGLGVYVPILKAYCKENRTAEASLLVTEISSSGLKLDVETYDALIETSMSGQDFQ 453
Query: 576 GALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRIDCGVHDWNN 635
LF++M+ +++ + ++ G +NH LMA L EV E RI+ G HDWN+
Sbjct: 454 SVFSLFRDMRGARV-LDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRIEVGTHDWNS 512
Query: 636 VIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEMK-- 693
+IH FCK ++DA + +RM L PN QT+ S++ GY + KY +V LW E+K
Sbjct: 513 IIHAFCKAGRLEDARRTFRRMTFLQFEPNDQTYLSLINGYVS-AEKYFDVMMLWNEVKRK 571
Query: 694 -SFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFIDKYKYRTLFLKYHK 752
+ + FD+ L+D+ LY V+GGFF +VV +E K+F+DK++Y+ F++ HK
Sbjct: 572 LAGDGPKGIKFDQNLVDAFLYAMVKGGFFDAVMQVVEKSKEMKIFVDKWRYKQAFMETHK 631
Query: 753 TLYKGKTPKFQTEAQLKKREAALGFKKWLGL 783
L + K ++K EA + FK W GL
Sbjct: 632 KLKVARLRK----KNVRKMEALIAFKNWAGL 658
Score = 55.8 bits (133), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 102/458 (22%), Positives = 179/458 (39%), Gaps = 62/458 (13%)
Query: 108 DAWKLYEQHMQMDGFPRKTLVNKILTSFVESLDSKWLEKAYGLVEQAFEEGKQI-LLEKE 166
+AWK ++ FP K L N +LT + SL L F K LLE
Sbjct: 80 EAWKSFKTLTTHHSFPPKPLTNSLLTH-LSSLPDNILNLKRAFASTLFLIQKHPNLLEFN 138
Query: 167 PLIYLSLGLSKCGLPVPASTILRKLVATEQYPPVTAWSAILAHMSLTAPGAYLAAELILE 226
+ + L + PA +++R + + P W +L ++ LAA L L
Sbjct: 139 TIHAILLSIKSANTAPPAFSLVRSMFKYRFFIPFHLWGGVLVDIARNNDN--LAAFLPL- 195
Query: 227 IGYLFQDGRVDPRKKCNAPLIAMKPNTNTFNIAL-AGCLLFETTRKAEQLLDIMPRIGVK 285
F++ + R + L M P+ + N AL A C ++ A ++++IM ++GVK
Sbjct: 196 ----FEE---NCRVAFDEKLEFMIPDVASCNAALEACCFCLQSVTDANRVVEIMSKLGVK 248
Query: 286 ADSNLLIIMAHIYERNGRREELRKLQRHIDE-AVNLSDIQFRQ----FYNCLLSCHLKFG 340
D +A++Y L+ LQ IDE V + + + FY+ L+S ++K
Sbjct: 249 PDVFSFGFLAYLY-------ALKGLQDKIDELKVLMVGFGYSKNNKCFYSNLISGYVKSA 301
Query: 341 DLNSASKMVLEMLQ-RAKEA------RNSLAAAMLPF----NAVGVNNRTPSEQNVNCTN 389
+L S +L L R E R++ + + N G+ N Q + +N
Sbjct: 302 NLVSVESTILSSLNDRDDEGEVWSFDRDTFCLVVKEYLHKGNIKGLANLIIEAQKLESSN 361
Query: 390 SVDLENSGI-IENHILSYEDFTKDRKFVALEAEVKRVLQTLLGMLQKQVELITTEHGILQ 448
E+ G I N +S + L + +L + L V L
Sbjct: 362 IKVDESIGFGIVNACVS----------IGLSDKAHSILDE-MNALGGSVGL--------- 401
Query: 449 PTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQAH 508
+Y+ ++KA+ + +T E + + + L++ D +I +S
Sbjct: 402 ---GVYVPILKAYCKENRTAEASLLVTEISSSGLKL--DVETYDALIETSMSGQDFQSVF 456
Query: 509 DLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALL 546
L +M A V Y +++ +E +RP + A L
Sbjct: 457 SLFRDMRGARVLDLKGSYLTIMTGLMENHRPELMAAFL 494
>gi|242058949|ref|XP_002458620.1| hypothetical protein SORBIDRAFT_03g036830 [Sorghum bicolor]
gi|241930595|gb|EES03740.1| hypothetical protein SORBIDRAFT_03g036830 [Sorghum bicolor]
Length = 674
Score = 220 bits (560), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 117/336 (34%), Positives = 191/336 (56%), Gaps = 13/336 (3%)
Query: 451 EKIYIKLVKAFLEAGKTKELTHFLIKAEKENL---QVSHDDAALGHVITLCISLGWLDQA 507
E+ Y ++ + F++ + KEL +I+A + L +S +D+ ++ C+ LG L++A
Sbjct: 347 EETYSEVAQCFVDQSRIKELAQLIIQAHEIELTQQSMSVEDSVGFGIVNACVELGLLNKA 406
Query: 508 HDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQS 567
H +LDEM G VY+S+LKAY + ++ E L+ + +AG++LDA Y+AL+ +
Sbjct: 407 HSILDEMTAQGASIGLGVYSSILKAYCKEHKTAEAAQLVAEISAAGLKLDAGSYDALIDA 466
Query: 568 KIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRID 627
+ D A LFK+M+E+++P + ++ G +N++ GLMA L V + RI+
Sbjct: 467 SMTAHDFQSAFALFKDMREARLPEL-RTSYLTIMTGLTENNKPGLMASFLDSVVDDPRIE 525
Query: 628 CGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTE 687
HDWN++IH FCK ++DA + +RM L PN QT+ S++ GY + KY V
Sbjct: 526 IATHDWNSIIHAFCKVGRLEDARRTYRRMVFLRFEPNNQTYLSLINGYVS-AEKYFNVLI 584
Query: 688 LWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFIDKYKYRTLF 747
LW E++ F+ EL+D+ LY V+GGFF A +V+ +E K+FIDK++Y+ F
Sbjct: 585 LWTEVR----RKGTEFNHELIDAFLYALVKGGFFDMAMQVIEKAQEFKIFIDKWRYKQAF 640
Query: 748 LKYHKTLYKGKTPKFQTEAQLKKREAALGFKKWLGL 783
++ HK L K K +K EA + FK W G+
Sbjct: 641 METHKKLKVAKLRK----RNFRKMEALVAFKNWAGI 672
>gi|357125396|ref|XP_003564380.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g69290-like [Brachypodium distachyon]
Length = 668
Score = 219 bits (557), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 115/336 (34%), Positives = 189/336 (56%), Gaps = 13/336 (3%)
Query: 451 EKIYIKLVKAFLEAGKTKELTHFLIKAEKENL---QVSHDDAALGHVITLCISLGWLDQA 507
++ Y ++ + F++ G+ KEL +I+A++ L + DD+ ++ C+ LG L +A
Sbjct: 341 DECYTEVAQCFVDNGRIKELAQLIIQAQEIELTQQSLVVDDSVGFGIVNACVGLGLLSKA 400
Query: 508 HDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQS 567
H +LDEM G +Y+ +LKAY + + E L+ + +AG+QLDA Y+AL+ +
Sbjct: 401 HSILDEMTAQGASVGLGIYSPILKAYCKEQKTAEAAQLVAEITAAGLQLDAGSYDALIDA 460
Query: 568 KIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRID 627
+ D A LFK+M+E+++P + + ++ G +N+ LMA L V + RI+
Sbjct: 461 SMTAHDFQSAFTLFKDMREARVP-NLRTSYLTIMTGLTENNRPELMASFLDSVVDDPRIE 519
Query: 628 CGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTE 687
HDWN++IH FCK ++DA + +RM L PN QT+ S++ GY + KY V
Sbjct: 520 IATHDWNSIIHAFCKVGRLEDARRTYRRMVFLIFEPNNQTYLSLINGYLS-AEKYFNVLI 578
Query: 688 LWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFIDKYKYRTLF 747
LW E++ NF+ EL+D+ LY V+GGFF A +V+ +E K+F+DK++++ F
Sbjct: 579 LWTEVR----RKGANFNHELIDAFLYALVKGGFFDMAMQVIEKAQELKIFVDKWRHKQAF 634
Query: 748 LKYHKTLYKGKTPKFQTEAQLKKREAALGFKKWLGL 783
++ HK L K K +K EA + FK W GL
Sbjct: 635 METHKKLKVAKLRK----RNFRKMEALIAFKNWAGL 666
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 101/485 (20%), Positives = 176/485 (36%), Gaps = 72/485 (14%)
Query: 89 DPAKLSAEIENAINEHRYGDAWKLYEQHMQMDGFPRKTLVNKILTSFVESLDSKWLEKAY 148
D L I A+ E R DAW ++ P +++ V L++A+
Sbjct: 70 DAVALEEGIFAAVAEDRSDDAWLAFKSLAAASLSPSPPAAAALVSHLVAENHRLGLKRAF 129
Query: 149 GLVEQAFEEGKQILLEKEPLIYLSLGLSKCGLPVPASTILRK------LVATEQYPPVTA 202
V E+ PL +L C L ST + + P +A
Sbjct: 130 AAVVFLLEKSPH----ASPLPEAALETLFCSLVTAGSTAPALALARALIRCGRRLPAFSA 185
Query: 203 WSAILAHMSLTAPGAYLAAELILEIGYLFQDGRVDPRKKCNAPLIAMKPNTNTFNIALAG 262
W L ++ T ++ A + + + R+ +K + + M+P+ N L G
Sbjct: 186 WGRQLIDLTRTDTDSFAALLKVFD-----EACRLMVEEKSPSVIAVMRPDLAACNAVLDG 240
Query: 263 CLL-FETTRKAEQLLDIMPRIGVKADSNLLIIMAHIY---ERNGRREELRKLQRHIDEAV 318
C + AE++L+IM IGV D +A +Y + R +EL KL EA+
Sbjct: 241 CCRRLGSITDAERVLEIMSAIGVSPDVESFGCLAFLYAWRDVPSRVDELDKLL----EAL 296
Query: 319 NLSDIQFRQFYNCLLSCHLKFGDLNSASKMVLEMLQRAKEARNSLAAAMLPFNAVGVNNR 378
S + F+ L+S +LK S S ++L R
Sbjct: 297 GFSK---KIFFKNLVSGYLKCCSFESVSSIIL---------------------------R 326
Query: 379 TPSEQNVNCTNSVDLENSGIIENHILSYEDFTKDRKFVALEAEVKRVLQTLL-------G 431
T E+ V N+ D E + + + + + E++ Q+L+ G
Sbjct: 327 TLKERRVRDGNAFDDECYTEVAQCFVDNGRIKELAQLIIQAQEIELTQQSLVVDDSVGFG 386
Query: 432 MLQKQV--ELITTEHGILQPTEK--------IYIKLVKAFLEAGKTKELTHFLIKAEKEN 481
++ V L++ H IL IY ++KA+ + KT E + +
Sbjct: 387 IVNACVGLGLLSKAHSILDEMTAQGASVGLGIYSPILKAYCKEQKTAEAAQLVAEITAAG 446
Query: 482 LQVSHDDAALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPRE 541
LQ+ D + +I ++ A L +M A V + Y +++ E NRP
Sbjct: 447 LQL--DAGSYDALIDASMTAHDFQSAFTLFKDMREARVPNLRTSYLTIMTGLTENNRPEL 504
Query: 542 VTALL 546
+ + L
Sbjct: 505 MASFL 509
>gi|2245120|emb|CAB10542.1| hypothetical protein [Arabidopsis thaliana]
gi|7268514|emb|CAB78765.1| hypothetical protein [Arabidopsis thaliana]
Length = 1148
Score = 217 bits (553), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 172/690 (24%), Positives = 311/690 (45%), Gaps = 116/690 (16%)
Query: 93 LSAEIENAINEHRYGDAWKLYEQHMQMDGFPRKTLVNKILTSFVESLDSKWLEKAYGLVE 152
L ++E A+ +HR DAW +++ ++ GFP ++N+ +T S D+ WL KA L
Sbjct: 99 LKKKLETALKDHRVDDAWDVFKDFKRLYGFPESVIMNRFVTVLSYSSDAGWLCKASDLTR 158
Query: 153 QAFEEGKQILLEKEPLIYLSLGLSKCGLPVPASTILRKLVATEQYPPVTAWSAILAHMSL 212
A ++ +L + L LSL L++ + A +ILR ++ ++ HM
Sbjct: 159 LALKQNPG-MLSGDVLTKLSLSLARAQMVESACSILRIMLEKGYVLTSDVLRLVVMHM-- 215
Query: 213 TAPGAYLAAELILEIGYLFQDGRVDPRKKCNAPLIAMKPNTNTFNIALAGCLLFETTRKA 272
+ +E F G K+ ++P +KP+T FN+ L C+ F + K
Sbjct: 216 -------VCDRFVE----FNVG-----KRNSSPGNVVKPDTVLFNLVLGSCVRFGFSLKG 259
Query: 273 EQLLDIMPRIGVKADSNLLIIMAHIYERNGRREELRKLQRHIDEAVNLSDIQFRQFYNCL 332
++L+++M ++ V AD+ ++IM+ IYE NG R+ELRK + HI +
Sbjct: 260 QELIELMAKVDVVADAYSIVIMSCIYEMNGMRDELRKFKEHIGQ---------------- 303
Query: 333 LSCHLKFGDLNSASKMVLEMLQRAKEARNSLAAAMLPFNAVGVNNRTPSEQNVNCTNSVD 392
KF D+ SA ++ L+M + + ++ +G ++ P V
Sbjct: 304 ----FKFDDIGSAGRLALDMCK---------SKVLVSVENLGFDSEKPRVLPVG------ 344
Query: 393 LENSGIIENHILSYEDFTKDRKFVALEAEVKRVLQTLLGMLQKQVELITTEHGILQPTEK 452
+HI S K + ++ LG + + + + L T K
Sbjct: 345 -------SHHIRSGLKIHISPKLLQRDSS--------LG-VDTEATFVNYSNSKLGITNK 388
Query: 453 IYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQAHDLLD 512
KLV + EL+ L L VI C+++GWL+ AHD+LD
Sbjct: 389 TLAKLVYGYKRHDNLPELSKLLFSLGGSRL--------CADVIDACVAIGWLEAAHDILD 440
Query: 513 EMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQK 572
+M+ AG + Y +L Y ++ R LL+ AG+ D S E ++ + +K
Sbjct: 441 DMNSAGYPMELATYRMVLSGYYKSKMLRNAEVLLKQMTKAGLITDPSN-EIVVSPETEEK 499
Query: 573 DTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRIDCG--V 630
D+ +N E L L+QE+ G+++ +
Sbjct: 500 DS-------------------------------ENTE--LRDLLVQEINAGKQMKAPSML 526
Query: 631 HDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWG 690
++ N+ +++FCK ++ DA +++ + P Q+F ++ Y+++ G Y E+T +WG
Sbjct: 527 YELNSSLYYFCKAKMQGDALITYRKIPKMKIPPTVQSFWILIDMYSSL-GMYREITIVWG 585
Query: 691 EMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFIDKYKYRTLFLKY 750
++K +S ++ ++LL+ ++ F+RGG+F R E+++ M+E M+ D Y+ +LK
Sbjct: 586 DIKRNIASKNLKTTQDLLEKLVVNFLRGGYFERVMELISYMKENDMYNDLTMYKNEYLKL 645
Query: 751 HKTLYKG-KTPKFQTEAQLKKREAALGFKK 779
HK LY+ K TEAQ ++ E F+K
Sbjct: 646 HKNLYRTLKASDAVTEAQAQRLEHVKTFRK 675
>gi|224098970|ref|XP_002311339.1| predicted protein [Populus trichocarpa]
gi|222851159|gb|EEE88706.1| predicted protein [Populus trichocarpa]
Length = 654
Score = 217 bits (552), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 118/341 (34%), Positives = 189/341 (55%), Gaps = 11/341 (3%)
Query: 447 LQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEK-ENLQVSHDDAALGHVITLCISLGWLD 505
L +E+ Y ++VK F++ G K L + +I+A+K E+ ++ D + +I+ C++L D
Sbjct: 319 LNFSEETYCQVVKGFMKDGGIKGLANLIIEAQKLESATIAADKSTGFGIISACVNLRLSD 378
Query: 506 QAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALL 565
+AH ++DEM G V+ +LKAY + R E T L+ D + G+QLD Y+AL+
Sbjct: 379 KAHSIVDEMDAQGGSVGLGVFLPILKAYCKEYRTAEATQLVMDISNKGLQLDEGSYDALI 438
Query: 566 QSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQR 625
++ + +D A LF++M+E G + ++ G + LMA L E+ E R
Sbjct: 439 EASMTSQDFQSAFTLFRDMREGIAELKGS--YLTIMTGLMEKQRPELMAAFLDEIVEDPR 496
Query: 626 IDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEV 685
++ HDWN++IH FCK ++DA++ +RM L PN QT+ S++ GY KY V
Sbjct: 497 VEVKTHDWNSIIHAFCKAGRLEDAKRTFRRMTFLQFEPNDQTYLSLINGYVT-AEKYFGV 555
Query: 686 TELWGEMKSFAS---STSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFIDKYK 742
LW E+K S + FD+ L+D+ LY V+GGFF +VV +E K+F+DK++
Sbjct: 556 LMLWNEVKRKVSPDKEKGIKFDQSLVDAFLYAMVKGGFFDAVMQVVEKSQEMKIFVDKWR 615
Query: 743 YRTLFLKYHKTLYKGKTPKFQTEAQLKKREAALGFKKWLGL 783
Y+ F++ HK L K K +K EA + FK W+GL
Sbjct: 616 YKQAFMESHKKLKVSKLRK----RNFRKMEALIAFKNWVGL 652
>gi|297841661|ref|XP_002888712.1| hypothetical protein ARALYDRAFT_339164 [Arabidopsis lyrata subsp.
lyrata]
gi|297334553|gb|EFH64971.1| hypothetical protein ARALYDRAFT_339164 [Arabidopsis lyrata subsp.
lyrata]
Length = 1042
Score = 215 bits (548), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 120/336 (35%), Positives = 189/336 (56%), Gaps = 12/336 (3%)
Query: 451 EKIYIKLVKAFLEAGKTKELTHFLIKAEK-ENLQVSHDDAALGHVITLCISLGWLDQAHD 509
E+ Y +LVK F+E+ K L +I+A+K E+ + D + +I C++LG+ D+AH
Sbjct: 324 EETYCELVKGFIESKSVKGLAKVIIEAQKLESSSIDADSSVGFGIINACVNLGFSDKAHS 383
Query: 510 LLDEM-HLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSK 568
+L+EM G Y +LKAY + R E T L+ + S+G+QLD Y AL+++
Sbjct: 384 ILEEMIAQGGGSVGIGAYVPILKAYCKEYRTAEATQLVTEINSSGLQLDVEIYNALIEAS 443
Query: 569 IVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRIDC 628
+ +D A LF++M+E+++ + ++ G +N LMA L EV E R++
Sbjct: 444 MTNQDFISAFTLFRDMRETRVG-DLKGSYLTIMTGLLENQRPELMAAFLDEVVEDPRVEV 502
Query: 629 GVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTEL 688
HDWN++IH FCK ++DA + +RM L + PN QT+ S++ GY + G KY V L
Sbjct: 503 NSHDWNSIIHAFCKSGRLEDARRTFRRMVFLRYEPNNQTYLSLINGYVS-GEKYFNVLLL 561
Query: 689 WGEMKSFASSTSM----NFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFIDKYKYR 744
W E+K SS D L+D+ LY V+GGFF A +VV +E K+F+DK++Y+
Sbjct: 562 WNEIKGKISSMEAEKRSKLDHALVDAFLYALVKGGFFDAAMQVVEKSQEMKIFVDKWRYK 621
Query: 745 TLFLKYHKTLYKGKTPKFQTEAQLKKREAALGFKKW 780
F++ HK L + PK + + KK E+ + FK W
Sbjct: 622 QAFMETHKKL---RLPKLR-KRNYKKMESLVAFKNW 653
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/270 (22%), Positives = 120/270 (44%), Gaps = 20/270 (7%)
Query: 91 AKLSAEIENAINEHRYGDAWKLYEQHMQMDGFPRKTLVNKILTSFVESLDS-----KWLE 145
+ + + +++ H +AWK + P K L+N ++T + +S L+
Sbjct: 59 SSFESTLHDSLTTHNTDEAWKAFRSLTAASSLPEKRLINSLITHLSNTEESGENTAHRLK 118
Query: 146 KAYGLVEQAFEEGKQILLEKEPLIYLSLGLSKCGLPVPASTILRKLVATEQYPPVTAWSA 205
+A+ ++ ILLE E + L + PA +++ + + P W
Sbjct: 119 RAFASAAYVIQK-DPILLEFETVRTLMESMKLAKAAGPALALVKCMFKNRYFVPFDLWGH 177
Query: 206 ILAHMSLTAPGAYLAAELILEIGYLFQDGRVDPRKKCNAPLIAMKPNTNTFNIAL-AGCL 264
++ + + LAA L +F++ R + L MKP+ N AL A C
Sbjct: 178 LI--IDICRENGSLAAFL-----KVFKES---CRIAVDEKLDFMKPDLVASNAALEACCR 227
Query: 265 LFETTRKAEQLLDIMPRIGVKADSNLLIIMAHIYERNGRREELRKLQRHIDEAVNLSDIQ 324
E+ A+ +++ M +GVK D +A++Y R G RE++ +L+ +D
Sbjct: 228 QLESLADADNVIESMAVLGVKPDELSFGFLAYLYARKGLREKISELENLMD---GFGFAS 284
Query: 325 FRQFYNCLLSCHLKFGDLNSASKMVLEMLQ 354
R Y+ ++S ++K GDL++ S ++L L+
Sbjct: 285 RRILYSNMISGYVKSGDLDNVSDVILHSLK 314
>gi|326522078|dbj|BAK04167.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 416
Score = 214 bits (546), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 114/337 (33%), Positives = 189/337 (56%), Gaps = 15/337 (4%)
Query: 451 EKIYIKLVKAFLEAGKTKELTHFLIKAEK----ENLQVSHDDAALGHVITLCISLGWLDQ 506
E+ Y ++ + F++ G+ +EL + +A++ L V D G V+ C+ LG L++
Sbjct: 89 EECYTEVAQCFVDNGRIRELAQLIFQAQEIESTHQLLVVDDSVGFG-VVNACVGLGLLNK 147
Query: 507 AHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQ 566
AH +LDEM G ++Y+ +LKAY + + E L+ + +AG+QLDA Y+AL+
Sbjct: 148 AHSILDEMTAQGASVGLAIYSPILKAYCKEQKTAEAAQLVAEINAAGLQLDAGSYDALID 207
Query: 567 SKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRI 626
+ + D A LFK+M+E+++P + ++ G +N+ LMA L V + RI
Sbjct: 208 ASMTAHDFQSAFALFKDMREARLP-DLRTSYLTIMTGLTENNRPELMASFLDAVVDDPRI 266
Query: 627 DCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVT 686
+ HDWN++IH FCK ++DA + +RM L + PN QT+ S++ GY + KY V
Sbjct: 267 EIATHDWNSIIHAFCKVGRLEDARRTYRRMLFLLYEPNNQTYLSLINGYLS-AEKYFYVL 325
Query: 687 ELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFIDKYKYRTL 746
LW E++ +F+ EL+D+ L+ V+GGFF A +V+ +E K+F+DK++++
Sbjct: 326 ILWTEVR----RKGADFNHELIDAFLHALVKGGFFDMAMQVIEKAQESKIFVDKWRHKQA 381
Query: 747 FLKYHKTLYKGKTPKFQTEAQLKKREAALGFKKWLGL 783
F++ HK L K K +K EA + FK W GL
Sbjct: 382 FMETHKKLKVAKLRK----RNFRKMEALIAFKNWAGL 414
>gi|12325092|gb|AAG52501.1|AC018364_19 unknown protein; 45065-49536 [Arabidopsis thaliana]
Length = 860
Score = 214 bits (544), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 121/336 (36%), Positives = 189/336 (56%), Gaps = 12/336 (3%)
Query: 454 YIKLVKAFLEAGKTKELTHFLIKAEK-ENLQVSHDDAALGHVITLCISLGWLDQAHDLLD 512
Y +LVK F+E+ K L +++A+K E+ V D + +I C++LG+ D+AH +L+
Sbjct: 529 YCELVKGFIESKSVKSLAKVILEAQKLESSYVGVDSSVGFGIINACVNLGFSDKAHSILE 588
Query: 513 EM-HLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQ 571
EM G VY +LKAY + R E T L+ + S+G+QLD AL+++ +
Sbjct: 589 EMIAQGGGSVGIGVYVPILKAYCKEYRTAEATQLVTEISSSGLQLDVEISNALIEASMTN 648
Query: 572 KDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRIDCGVH 631
+D A LF++M+E+++ + ++ G +N LMA L EV E R++ H
Sbjct: 649 QDFISAFTLFRDMRENRV-VDLKGSYLTIMTGLLENQRPELMAAFLDEVVEDPRVEVNSH 707
Query: 632 DWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGE 691
DWN++IH FCK ++DA + +RM L + PN QT+ S++ GY + G KY V LW E
Sbjct: 708 DWNSIIHAFCKSGRLEDARRTFRRMVFLRYEPNNQTYLSLINGYVS-GEKYFNVLLLWNE 766
Query: 692 MKSFASSTSMN----FDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFIDKYKYRTLF 747
+K SS D L+D+ LY V+GGFF A +VV +E K+F+DK++Y+ F
Sbjct: 767 IKGKISSVEAEKRSRLDHALVDAFLYALVKGGFFDAAMQVVEKSQEMKIFVDKWRYKQAF 826
Query: 748 LKYHKTLYKGKTPKFQTEAQLKKREAALGFKKWLGL 783
++ HK L + PK + + KK E+ + FK W GL
Sbjct: 827 METHKKL---RLPKLR-KRNYKKMESLVAFKNWAGL 858
Score = 73.2 bits (178), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 73/279 (26%), Positives = 124/279 (44%), Gaps = 30/279 (10%)
Query: 91 AKLSAEIENAINEHRYGDAWKLYEQHMQMDGFPRKTLVNKILT--SFVESLD---SKWLE 145
+ + + +++N H +AWK + P K L+N ++T S VE S L+
Sbjct: 261 SSFESTLHDSLNAHYTDEAWKAFRSLTAASSLPEKRLINSLITHLSGVEGSGESISHRLK 320
Query: 146 KAYGLVEQAFEEGKQILLEKEPLIYL--SLGLSKCGLPVPASTILRKLVATEQYPPVTAW 203
+A+ E+ ILLE E + L S+ L+K PA +++ + + P W
Sbjct: 321 RAFASAAYVIEK-DPILLEFETVRTLLESMKLAKAA--GPALALVKCMFKNRYFVPFDLW 377
Query: 204 SAILAHMSLTAPGAYLAAELILEIGYLFQDGRV---DPRKKCNAPLIAMKPNTNTFNIAL 260
+L ++ E G L +V R + L MKP+ N AL
Sbjct: 378 -------------GHLVIDICRENGSLAPFLKVFKESCRISVDEKLEFMKPDLVASNAAL 424
Query: 261 -AGCLLFETTRKAEQLLDIMPRIGVKADSNLLIIMAHIYERNGRREELRKLQRHIDEAVN 319
A C E+ AE +++ M +GVK D +A++Y R G RE++ +L+ +D
Sbjct: 425 EACCRQMESLADAENVIESMAVLGVKPDELSFGFLAYLYARKGLREKISELENLMD---G 481
Query: 320 LSDIQFRQFYNCLLSCHLKFGDLNSASKMVLEMLQRAKE 358
R Y+ ++S ++K GDL+S S ++L L+ E
Sbjct: 482 FGFASRRILYSNMISGYVKSGDLDSVSDVILHSLKEGGE 520
>gi|30697827|ref|NP_177089.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806277|sp|P0C7R4.1|PP110_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g69290
gi|332196785|gb|AEE34906.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 658
Score = 214 bits (544), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 121/336 (36%), Positives = 189/336 (56%), Gaps = 12/336 (3%)
Query: 454 YIKLVKAFLEAGKTKELTHFLIKAEK-ENLQVSHDDAALGHVITLCISLGWLDQAHDLLD 512
Y +LVK F+E+ K L +++A+K E+ V D + +I C++LG+ D+AH +L+
Sbjct: 327 YCELVKGFIESKSVKSLAKVILEAQKLESSYVGVDSSVGFGIINACVNLGFSDKAHSILE 386
Query: 513 EM-HLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQ 571
EM G VY +LKAY + R E T L+ + S+G+QLD AL+++ +
Sbjct: 387 EMIAQGGGSVGIGVYVPILKAYCKEYRTAEATQLVTEISSSGLQLDVEISNALIEASMTN 446
Query: 572 KDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRIDCGVH 631
+D A LF++M+E+++ + ++ G +N LMA L EV E R++ H
Sbjct: 447 QDFISAFTLFRDMRENRVV-DLKGSYLTIMTGLLENQRPELMAAFLDEVVEDPRVEVNSH 505
Query: 632 DWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGE 691
DWN++IH FCK ++DA + +RM L + PN QT+ S++ GY + G KY V LW E
Sbjct: 506 DWNSIIHAFCKSGRLEDARRTFRRMVFLRYEPNNQTYLSLINGYVS-GEKYFNVLLLWNE 564
Query: 692 MKSFASSTSM----NFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFIDKYKYRTLF 747
+K SS D L+D+ LY V+GGFF A +VV +E K+F+DK++Y+ F
Sbjct: 565 IKGKISSVEAEKRSRLDHALVDAFLYALVKGGFFDAAMQVVEKSQEMKIFVDKWRYKQAF 624
Query: 748 LKYHKTLYKGKTPKFQTEAQLKKREAALGFKKWLGL 783
++ HK L + PK + + KK E+ + FK W GL
Sbjct: 625 METHKKL---RLPKLR-KRNYKKMESLVAFKNWAGL 656
Score = 72.4 bits (176), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 73/279 (26%), Positives = 124/279 (44%), Gaps = 30/279 (10%)
Query: 91 AKLSAEIENAINEHRYGDAWKLYEQHMQMDGFPRKTLVNKILT--SFVESLD---SKWLE 145
+ + + +++N H +AWK + P K L+N ++T S VE S L+
Sbjct: 59 SSFESTLHDSLNAHYTDEAWKAFRSLTAASSLPEKRLINSLITHLSGVEGSGESISHRLK 118
Query: 146 KAYGLVEQAFEEGKQILLEKEPLIYL--SLGLSKCGLPVPASTILRKLVATEQYPPVTAW 203
+A+ E+ ILLE E + L S+ L+K PA +++ + + P W
Sbjct: 119 RAFASAAYVIEK-DPILLEFETVRTLLESMKLAKAA--GPALALVKCMFKNRYFVPFDLW 175
Query: 204 SAILAHMSLTAPGAYLAAELILEIGYLFQDGRV---DPRKKCNAPLIAMKPNTNTFNIAL 260
+L ++ E G L +V R + L MKP+ N AL
Sbjct: 176 -------------GHLVIDICRENGSLAPFLKVFKESCRISVDEKLEFMKPDLVASNAAL 222
Query: 261 -AGCLLFETTRKAEQLLDIMPRIGVKADSNLLIIMAHIYERNGRREELRKLQRHIDEAVN 319
A C E+ AE +++ M +GVK D +A++Y R G RE++ +L+ +D
Sbjct: 223 EACCRQMESLADAENVIESMAVLGVKPDELSFGFLAYLYARKGLREKISELENLMD---G 279
Query: 320 LSDIQFRQFYNCLLSCHLKFGDLNSASKMVLEMLQRAKE 358
R Y+ ++S ++K GDL+S S ++L L+ E
Sbjct: 280 FGFASRRILYSNMISGYVKSGDLDSVSDVILHSLKEGGE 318
>gi|147766554|emb|CAN69520.1| hypothetical protein VITISV_018331 [Vitis vinifera]
Length = 444
Score = 211 bits (537), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 153/487 (31%), Positives = 244/487 (50%), Gaps = 62/487 (12%)
Query: 301 NGRREELRKLQRHIDEAVNLSDIQFRQFYNCLLSCHLKFGDLNSASKMVLEMLQRAKEAR 360
NG+R++L+K + HID+ + QFY+ LLS H KF D++ A+ +VL+M +
Sbjct: 15 NGQRDDLKKFKCHIDQVSIQLACHYWQFYDSLLSLHFKFNDIDGAAGLVLDMCR----CW 70
Query: 361 NSLAAAMLPFNAVGVNNRTPSEQNVNCTNSVDLENSGIIENHILSYEDFTKDRKFVALEA 420
+SL+ + + P + T V +E+ + E L
Sbjct: 71 DSLS--------IQKDRNDPHK-----TCLVPIESYYLKEGLKLQI-------------- 103
Query: 421 EVKRVLQ--TLLGMLQKQVELITTEHGILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAE 478
V +LQ ++ M KQ EL+ +G + K KL+ A+ G+ EL+ ++ +
Sbjct: 104 -VPELLQKDSVFKMDSKQ-ELLLFRNGKYVLSNKALAKLIIAYKRDGRIGELSRLMLSLQ 161
Query: 479 KENLQVSHDDAALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANR 538
KE + + + VI CI LGWL+ AHD+LD+M LAG ASS Y SLL AY +
Sbjct: 162 KE--LGTLEGGLISDVIDACIQLGWLETAHDILDDMELAGAPASSITYMSLLTAYYKGKM 219
Query: 539 PREVTALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFE 598
RE ALL+ R AG+ +D S EM + +
Sbjct: 220 VREAKALLKQMRKAGLIVDLS----------------------DEMVMTTCLSGVVDKNR 257
Query: 599 MLVKGCAQNHEAGLMAKLLQEVKEGQR-IDCGVHDWNNVIHFFCKKRLMQDAEKALKRMR 657
M + ++GL L++E+K+ ++ I V+ +N+ I+FFCK +++ DA + RM+
Sbjct: 258 MHTRTSTSIWKSGLAESLVREMKKQEKAILPVVYKFNSSIYFFCKAKMIDDALRIYGRMQ 317
Query: 658 SLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVR 717
+ P QTF ++V GY+ + Y E+T LWG++KS S S+ +L + ++ F+R
Sbjct: 318 EMKIEPTVQTFINLVYGYSCLN-MYREITILWGDIKSSRKSGSLVVCRDLYEFLVLNFLR 376
Query: 718 GGFFARANEVVAMMEEGKMFIDKYKYRTLFLKYHKTLYKG-KTPKFQTEAQLKKREAALG 776
GG+F R EV+ M+E M+ DK+ Y+ FLK+HK LY+ K +TEAQ K+ E
Sbjct: 377 GGYFERVMEVIGCMKEQNMYCDKWMYKREFLKFHKDLYRNLKASNTRTEAQSKRLEYVEA 436
Query: 777 FKKWLGL 783
F+ W G+
Sbjct: 437 FRTWAGI 443
>gi|89257692|gb|ABD65179.1| pentatricopeptide (PPR) repeat-containing protein [Brassica
oleracea]
Length = 567
Score = 211 bits (536), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 172/666 (25%), Positives = 306/666 (45%), Gaps = 110/666 (16%)
Query: 128 VNKILTSFVESLDSKWLEKAYGLVEQAFEEGKQILLEKEPLIYLSLGLSKCGLPVPASTI 187
+N+ +T F S DS WL KA L A ++ L+ + L L L L++ + A I
Sbjct: 1 MNRFVTVFSYSSDSAWLCKADDLSRLALKQNSG-LVNSDALTKLLLSLARAQMSESACNI 59
Query: 188 LRKLVATEQYPPVTAWSAILAHMSLTAPGAYLAAELILEIGYLFQDGRVDPRKKCNAPLI 247
LR ++ ++ HM T G LA+ ++++ + F ++ ++ N
Sbjct: 60 LRTMLEKGFVLTPDVLRLVVMHMVKTEVGTCLASNYLVQVCHRF----MELKRNSNV--- 112
Query: 248 AMKPNTNTFNIALAGCLLFETTRKAEQLLDIMPRIGVKADSNLLIIMAHIYERNGRREEL 307
MKP+T FN+ L C+ F + K ++L+++M + V AD + ++IM+ +YE NG R+EL
Sbjct: 113 -MKPDTVLFNLVLGSCVRFGFSLKGQELIELMAKADVVADGHSIVIMSCVYEMNGMRDEL 171
Query: 308 RKLQRHIDEAVNLSDIQFRQFYNCLLSCHLKFGDLNSASKMVLEMLQRAKEARNSLAAAM 367
+KL+ I + +R+ Y+ LLS KF D+ SA ++VL++ +++K+
Sbjct: 172 KKLKEGIGHVPSQLLCHYRRLYDNLLSLEFKFDDIGSAGRLVLDICKKSKD--------- 222
Query: 368 LPFNAVGVNNRTPSEQNVNCTNSVDLENSGII---ENHILSYEDFTKDRKFVALEAEVK- 423
PS QN LE ++ +HI S L+ +
Sbjct: 223 -----------LPSVQN--------LEKVMVLPVGSHHIRS-----------GLKIRISP 252
Query: 424 RVLQ--TLLGMLQKQVELITTEHGILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKEN 481
+LQ + LG + + ++ L T K KLV + EL+ L
Sbjct: 253 EILQRDSSLG-VDSEATFVSCADSKLGVTNKTLAKLVYGYKRRENLPELSKLLFSVGGTK 311
Query: 482 LQVSHDDAALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPRE 541
L VI C+++GWL+ AHD+LD++ AG Y +L Y ++ R
Sbjct: 312 L--------CADVIDACVAVGWLEAAHDILDDLVSAGNPMDLVTYRKVLSGYHKSKMLRN 363
Query: 542 VTALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLV 601
L+R AG+ D S E+K+
Sbjct: 364 AEVLVRQMTKAGLVTDPS----------------------DEIKD--------------- 386
Query: 602 KGCAQNHEAGLMAKLLQEVKEGQ--RIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSL 659
+N E L A L+QE+ G+ ++ +++ N+ +++FCK ++ DA ++++ +
Sbjct: 387 ---CENTE--LRALLVQEINAGEQTKVPSMLYELNSSLYYFCKAKMQGDAVTTYRKIQKM 441
Query: 660 GHL-PNAQTFHSMVTGYAAIGGKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRG 718
+ P Q++ +V Y+++ Y E+T WG++K +S + ++LL+ ++ F+RG
Sbjct: 442 KTISPTVQSYWILVDMYSSL-SMYREITVAWGDIKRNVASRELEVTQDLLEKLVVNFLRG 500
Query: 719 GFFARANEVVAMMEEGKMFIDKYKYRTLFLKYHKTLYKG-KTPKFQTEAQLKKREAALGF 777
G+F R EV++ M+E M+ D Y+ +LK H+ LY+ K TEAQ ++ E F
Sbjct: 501 GYFERVMEVISCMKEKGMYNDVAMYKNEYLKVHRNLYRTLKAADAVTEAQAQRVEHVKAF 560
Query: 778 KKWLGL 783
+K +G+
Sbjct: 561 RKLVGI 566
>gi|297607252|ref|NP_001059695.2| Os07g0495300 [Oryza sativa Japonica Group]
gi|255677782|dbj|BAF21609.2| Os07g0495300 [Oryza sativa Japonica Group]
Length = 588
Score = 197 bits (502), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 154/586 (26%), Positives = 279/586 (47%), Gaps = 71/586 (12%)
Query: 75 PFSSMGGTILV-QARDPAKLSAEIENAINEHRYGDAWKLYEQHMQMDGFPRKTLVNKILT 133
P ++ IL +A L I A+++ D + + + + G P ++++++
Sbjct: 48 PMGTIAAKILPWEAPSRETLLRTINAALDDGNVDDVLQAFANYKTLHGLPEPRVLDRMIV 107
Query: 134 SFVESLDSKWLEKAYGLVEQAFEEGKQILLEKEPLIYLSLGLSKCGLPVPASTILRKLVA 193
S + +WL++A+ +V ++ LL L+ L+L L++ +P+PAST++R ++
Sbjct: 108 SLSYASSRRWLQRAFDMVLSVYQCNGN-LLNCGSLMKLALALARDQMPIPASTVVRIILE 166
Query: 194 TEQYPPVTAWSAILAHMSLTAPGAYLAAELILEIGYLFQDGRVDPRKKCNAPLIAMKPNT 253
+ + P V + + HM + G+YLAA+++ E F + D R+ L +K N
Sbjct: 167 SGKLPDVDMLTMVYLHMVKSQVGSYLAADVLCETCECFLEQIGDRRQL--KKLDPIKSNV 224
Query: 254 NTFNIALAGCLLFETTRKAEQLLDIMPRIGVKADSNLLIIMAHIYERNGRREELRKLQRH 313
FN+ L C+ F+ KA++++++M +GV AD N + I + ++E G++ EL ++R
Sbjct: 225 TLFNMVLKSCVDFKCMIKAQRIMELMSLVGVVADVNTVAIASLVFEMVGQQVELVNMKRS 284
Query: 314 IDEAVNLSDIQ-FRQFYNCLLSCHLKFGDLNSASKMVLEMLQRAKEARNSLAAAMLPFNA 372
ID +L IQ + FY LL+ H K+ D+++A+++++++ ++ K P
Sbjct: 285 IDSFASLPFIQHYLYFYGSLLNLHFKYNDMDAAAQLLVDLYRQQK-----------PRAF 333
Query: 373 VGVNNRTPSEQNVNCTNSVDLENSGIIENHILSYEDFTKDRKFVALEAEVKRVLQTLLGM 432
VG +V+ + + + + + ++ D+ FV L+ E
Sbjct: 334 VG--------DSVHKQGVIQIGSGNLKTGFRIMFDPIKVDKGFV-LDTE----------- 373
Query: 433 LQKQVELITTEHGILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQ-VSHDDAAL 491
Q L+ G ++P+EK K + L+A K + L+ FLI KE+L+ SH D
Sbjct: 374 --SQFGLLAVIDGNIRPSEKALAKFIVGCLKASKVRALSSFLITLHKEDLKGPSHSD--- 428
Query: 492 GHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARS 551
VI+ CI +GWL AHD+LD++ A + Y SLL+AY + N+P EV L+
Sbjct: 429 --VISACILMGWLHAAHDILDDLESAEIPVLICTYMSLLRAYEKENKPEEVNRFLQ---- 482
Query: 552 AGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAG 611
Q+ Y T H P ++ +VK +
Sbjct: 483 ---QIQKKAY------------TMADFH--------TNPSFTIKDVAKIVKDEMPLRNSS 519
Query: 612 LMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMR 657
L++ L+QE++ + ++NN I FFCK +M DA KRMR
Sbjct: 520 LLSSLVQEIEHYSSREHLTFEFNNSILFFCKANMMDDALSTYKRMR 565
>gi|225439751|ref|XP_002273172.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09650,
chloroplastic-like [Vitis vinifera]
Length = 749
Score = 193 bits (490), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 174/703 (24%), Positives = 312/703 (44%), Gaps = 85/703 (12%)
Query: 101 INEHRYGDAWKLYEQHMQMDGFPRKTLVNKILTSFVESLDSKWLEKAYGLVEQAFEEGKQ 160
+ + + +AW Y Q Q+ P T ++++++ + L +A ++++ E +
Sbjct: 88 LRQRKTEEAWLTYVQCTQL---PSPTCLSRLVSQLSYQNTHQALTRAQSIIQRLRNERQL 144
Query: 161 ILLEKEPLIYLSLGLSKCGLPVPASTILRKLVATEQYPPVTAWSAILAHMSLTAPGAYLA 220
L+ L L++ +K G + A+++++ ++ + P V AWSA+++ ++ +
Sbjct: 145 HRLDANSLGLLAVSAAKAGHTLYAASLIKSMLRSGYLPHVKAWSAVVSRLAASGDDG--- 201
Query: 221 AELILEIGYLFQDGRVDPRKKCNAPLIA-MKPNTNTFNIALAGCLLFETTRKAEQLLDIM 279
LE LF + +A L+A +P+T +N L C T++ Q+ + M
Sbjct: 202 ---PLEALKLFDSVTRRIHRFTDATLVADSRPDTAAYNAVLNACANLGDTKRFLQVFEEM 258
Query: 280 PRIGVKADSNLLIIMAHIYERNGRREELR-KLQRHIDEAVNLSDIQFRQFYNCLLSCHLK 338
++G + D +M + R R++ L L+R +D+ + L + L++ ++
Sbjct: 259 TQLGAEPDVLTYNVMIKLCARVDRKDLLVFVLERILDKGIQLCMTTL----HSLVAAYVG 314
Query: 339 FGDLNSASKMVLEMLQRAKEARNSLAAAMLPFNAVGVNNRTPSEQNVNCTNSVDLENSGI 398
FGDL +A K+V Q +E R L + N+ EN G
Sbjct: 315 FGDLETAEKLV----QAMREGRQDLCKILRDVNS---------------------ENPGN 349
Query: 399 IENHILSYEDFTKDRKFVALEAEVKRVLQTLLGMLQKQVELITTEHGILQ----PTEKIY 454
E +I F K +L VE +E +L P +IY
Sbjct: 350 NEGYI-----FDK--------------------LLPNSVERNNSEPPLLPKAYAPDSRIY 384
Query: 455 IKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDD-AALGHVITLCISLGWLDQAHDLLDE 513
L+K +++ G+ + L ++ S D V++ + G +D+A +L E
Sbjct: 385 TTLMKGYMKEGRVTDTVRMLEAMRHQDDSTSQPDHVTYTTVVSALVKAGSMDRARQVLAE 444
Query: 514 MHLAGVRASSSVYASLLKAYIEANRPREVTALLRD-ARSAGIQLDASCYEALLQSKIVQK 572
M GV A+ Y LLK Y E + + L+R+ GI D Y L+ I+
Sbjct: 445 MTRIGVPANRVTYNILLKGYCEQLQIDKAKELVREMVDDEGIVPDVVSYNTLIDGCILVD 504
Query: 573 DTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRIDCGVHD 632
D+ GAL F EM+ I + + L+K A + + L K+ E+ R+ +
Sbjct: 505 DSAGALAYFNEMRARGIAPT-KISYTTLMKAFALSGQPKLANKVFDEMLRDPRVKVDLVA 563
Query: 633 WNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEM 692
WN ++ C+ L+++A+K ++RMR G PN T+ S+ G A+ K E LW E+
Sbjct: 564 WNMLVEAHCRLGLVEEAKKTVQRMRENGFYPNVATYGSLANGI-ALARKPGEALLLWNEV 622
Query: 693 K-----------SFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFIDKY 741
K S +S + DE LLD++ VR FF +A E+VA MEE + +K
Sbjct: 623 KERCVVKEEGEISKSSPPPLKPDEGLLDTLADICVRAAFFRKALEIVACMEENGIPPNKS 682
Query: 742 KYRTLFLKYHKTLYKGK-TPKFQTEAQLKKREAALGFKKWLGL 783
KY ++++ H ++ K K + + + +++ AA FK WLGL
Sbjct: 683 KYTRIYVEMHSRMFTSKHASKARQDRRSERKRAAEAFKFWLGL 725
>gi|15221572|ref|NP_177062.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75333630|sp|Q9CAA5.1|PP109_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g68980, mitochondrial; Flags: Precursor
gi|12323218|gb|AAG51590.1|AC011665_11 unknown protein [Arabidopsis thaliana]
gi|110740675|dbj|BAE98440.1| hypothetical protein [Arabidopsis thaliana]
gi|332196751|gb|AEE34872.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 619
Score = 190 bits (483), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 105/332 (31%), Positives = 182/332 (54%), Gaps = 13/332 (3%)
Query: 450 TEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGH-VITLCISLGWLDQAH 508
+E+ Y +LV+ F+E+ + L +I+A+K + ++G ++ C+ LG+
Sbjct: 295 SEETYCELVRGFIESKSVESLAKLIIEAQKLESMSTDVGGSVGFGIVNACVKLGF--SGK 352
Query: 509 DLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSK 568
+LDE++ G VY +LKAY + R E T L+ + S+G+QLD Y ++++
Sbjct: 353 SILDELNAQGGSGGIGVYVPILKAYCKEGRTSEATQLVTEISSSGLQLDVETYNTMIEAS 412
Query: 569 IVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRIDC 628
+ + D AL LF++M+E+++ + + ++ G +N LMA+ ++EV E R++
Sbjct: 413 MTKHDFLSALTLFRDMRETRVA-DLKRCYLTIMTGLLENQRPELMAEFVEEVMEDPRVEV 471
Query: 629 GVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTEL 688
HDWN++IH FCK + DA+ +RM L + PN QT+ S++ GY + KY EV +
Sbjct: 472 KSHDWNSIIHAFCKSGRLGDAKSTFRRMTFLQYEPNNQTYLSLINGYVSC-EKYFEVVVI 530
Query: 689 WGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFIDKYKYRTLFL 748
W E K + L D+ L V+GGFF A +V+ +E K+F+DK++Y+ F+
Sbjct: 531 WKEFK----DKKAKLEHALADAFLNALVKGGFFGTALQVIEKCQEMKIFVDKWRYKATFM 586
Query: 749 KYHKTLYKGKTPKFQTEAQLKKREAALGFKKW 780
+ K L + PK + + ++KK E FK W
Sbjct: 587 ETQKNL---RLPKLR-KRKMKKIEFLDAFKNW 614
>gi|297838671|ref|XP_002887217.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297333058|gb|EFH63476.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 623
Score = 190 bits (482), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 113/334 (33%), Positives = 184/334 (55%), Gaps = 13/334 (3%)
Query: 451 EKIYIKLVKAFLEAGKTKELTHFLIKAEK-ENLQVSHDDAALGHVITLCISLGWLDQAHD 509
E+ Y +LVK F+E+ K L +I+A+K E+L + + + ++ C+ LG+
Sbjct: 300 EETYCELVKGFIESKSVKCLAKLIIEAQKLESLSIDVNGSVGFGIVNACVKLGF--SGKS 357
Query: 510 LLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKI 569
+LDEM+ G VY +LKAY + E T L+ + S+G+QLD Y +++ +
Sbjct: 358 ILDEMNAQGGSGGIGVYVPILKAYCKEGGTAEATQLVTEISSSGLQLDVETYNTMIEFSM 417
Query: 570 VQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRIDCG 629
++D AL LFK+M+E+K+ + + ++ G +N LMA+ ++EV E R++
Sbjct: 418 TKQDFLSALTLFKDMRETKVS-DLKRCYLTIMTGLLENQRPDLMAEFVEEVVEDPRVEVK 476
Query: 630 VHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELW 689
HDWN++IH FCK ++DA+ +RM L + PN QT+ S++ GY + KY EV LW
Sbjct: 477 SHDWNSIIHAFCKSGRLEDAKSTFRRMAFLQYEPNNQTYLSLINGYVSC-EKYFEVVVLW 535
Query: 690 GEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFIDKYKYRTLFLK 749
E K + L D+ L V+GGFF A +V+ +E K+F+DK++Y+ F++
Sbjct: 536 KEFK----DKKAKLEHALADAFLNALVKGGFFGTALQVIEKCQEMKIFVDKWRYKATFME 591
Query: 750 YHKTLYKGKTPKFQTEAQLKKREAALGFKKWLGL 783
K L + PK + ++KK E FK W GL
Sbjct: 592 TQKNL---RLPK-LRKRKMKKMEFLDAFKNWAGL 621
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 105/480 (21%), Positives = 193/480 (40%), Gaps = 49/480 (10%)
Query: 74 HPFSSMGGTILVQARDP---AKLSAEIENAINEHRYGDAWKLYEQHMQMDGFPRKTLVNK 130
PFSS+ + P + + + +++ H AWK++ P K L+N
Sbjct: 13 RPFSSISRKPSPKTLTPHQKSSFESTLHHSLITHDTDQAWKVFRSFAAASSLPDKRLLNS 72
Query: 131 ILT--SFVESLDSKW-----LEKAYGLVEQAFEEGKQILLEKEPL--IYLSLGLSKCGLP 181
++T S + D L++A+ E+ ILLE E + + S+ L+K
Sbjct: 73 LITHLSSLHHADQNTSLRHRLKRAFVSTTYVIEK-DPILLEFETIRTVLESMKLAKTS-- 129
Query: 182 VPASTILRKLVATEQYPPVTAWSAILAHMSLTAPGAYLAAELILEIGYLFQDGRVDPRKK 241
PA ++ + + P W ++ + + + LAA + R R
Sbjct: 130 GPALALVECMFKNRYFVPFDLWGRLI--IDICSETGSLAA--------FLKVFRESCRIA 179
Query: 242 CNAPLIAMKPNTNTFNIAL-AGCLLFETTRKAEQLLDIMPRIGVKADSNLLIIMAHIYER 300
L MKP+ N AL A C E+ AE +++ M +GVK D + +A++Y R
Sbjct: 180 VYEKLDFMKPDLVASNAALEACCWQLESLADAEDVIESMAVLGVKPDESSFGFLAYLYAR 239
Query: 301 NGRREELRKLQRHIDEAVNLSDIQFRQFYNCLLSCHLKFGDLNSASKMVLEMLQRAKEAR 360
G RE++ +++ +D + R Y+ ++S ++K GDL+S S ++L L+R E
Sbjct: 240 KGLREKISEIENSMD---GFGFVSRRILYSNVISGYVKSGDLDSVSDVILHSLKRGGEDS 296
Query: 361 NSLAAAMLPFNAVGVNNRTPSEQNVNCTNSVDLENSGIIENHILSYEDFTKDRKFVALEA 420
+ + +++ V C + +E + I D F + A
Sbjct: 297 SFREETYCELVKGFIESKS-----VKCLAKLIIEAQKLESLSI----DVNGSVGFGIVNA 347
Query: 421 EVKRVLQTLLGMLQKQV-ELITTEHGILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEK 479
VK LG K + + + + G +Y+ ++KA+ + G T E T + +
Sbjct: 348 CVK------LGFSGKSILDEMNAQGG--SGGIGVYVPILKAYCKEGGTAEATQLVTEISS 399
Query: 480 ENLQVSHDDAALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRP 539
LQ+ D +I ++ A L +M V Y +++ +E RP
Sbjct: 400 SGLQL--DVETYNTMIEFSMTKQDFLSALTLFKDMRETKVSDLKRCYLTIMTGLLENQRP 457
>gi|356536919|ref|XP_003536980.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09650,
chloroplastic-like [Glycine max]
Length = 716
Score = 184 bits (466), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 185/735 (25%), Positives = 325/735 (44%), Gaps = 75/735 (10%)
Query: 72 PTHPFSSMGGTILVQARDPAKLSAEIENAINEHRYGDAWKLYEQHMQMDGFPRKTLVNKI 131
P PF T + RD LS + + + +AW Y + P T ++++
Sbjct: 9 PLSPFQRATTTNSPEPRDQKLLSL-----LRDRKTEEAWLAYSHSTHL---PNPTCLSRL 60
Query: 132 LT--SFVESLDSKWLEKAYGLVEQAFEEGKQILLEKEPLIYLSLGLSKCGLPVPASTILR 189
++ S+ +L S L +A +V + E + L+ L L++ +K + A+++LR
Sbjct: 61 VSQLSYQNTLSS--LTRAQSIVTRLRNERQLHRLDANCLGLLAVSATKANHTLYAASLLR 118
Query: 190 KLVATEQYPPVTAWSAILAHMSLTAPGAYLAAELILEIGYLFQDGRVDPRKKCNAPLIAM 249
++ + P V AW+A++A ++ + AE + + + R P A A
Sbjct: 119 SMLRSGYLPHVKAWTAVVACLASSPDRGDGPAEALQLFRSVTRRLRRLPDPAMAA---AS 175
Query: 250 KPNTNTFNIALAGCLLFETTRKAEQLLDIMPRIGVKADSNLLIIMAHIYERNGRREEL-- 307
+P+T N AL C R Q+ D MP+ V D+ M + R GR++ L
Sbjct: 176 RPDTAAVNAALNACANLGDPRAFLQVFDEMPQFNVAPDALSYNTMIKLCCRIGRKDLLVF 235
Query: 308 ---RKLQRHIDEAVNLSDIQFRQFYNCLLSCHLKFGDLNSASKMVLEMLQRAKEARNSLA 364
R LQ I V L+S +++FGDL +A K+V M +E R +
Sbjct: 236 VLERVLQLEIPFCVTT--------LQSLVSAYVEFGDLETAEKLVQAM----REERRDIC 283
Query: 365 AAMLPFNAVGVNNRTPSEQNVNCTNSVDLENSGIIENHILSYEDFTKDRKFVALEAEVKR 424
+ C+N LE S E+ +D D E +
Sbjct: 284 RVL-----------------KECSN---LEYSSGNESSDDDDDDDDDDDDDNDCIFE--K 321
Query: 425 VLQTLLGMLQKQVELITTEHGILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQV 484
+L L+ +VE G P + Y L+K ++ AG+ + L + + +
Sbjct: 322 LLPNLVDQSGNEVEPPLLPKGY-APNTRTYTTLMKGYMNAGRVSDTVRMLEAMRRLDDKG 380
Query: 485 SHDD-AALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAY---IEANRPR 540
S D + V++ + +G +D+A +L EM GV A+ Y LLK Y ++ ++ R
Sbjct: 381 SQPDHVSYTTVVSALVKVGAMDRARQVLAEMTRIGVPANLITYNVLLKGYCKQLQIDKAR 440
Query: 541 EVTALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEML 600
E+ + D AGIQ D Y L+ I+ D+ GAL F EM+ I + + L
Sbjct: 441 ELLKEMVD--DAGIQPDVVSYNILIDGCILVDDSAGALSFFNEMRARGIAPT-KISYTTL 497
Query: 601 VKGCAQNHEAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLG 660
+K A + + L ++ E+ R+ + WN ++ +C+ L+++A+K +++M+ G
Sbjct: 498 MKAFAYSGQPKLAHRVFNEMDSDPRVKVDLIAWNMLVEGYCRLGLVEEAKKVVQKMKESG 557
Query: 661 HLPNAQTFHSMVTGYAAIGGKYTEVTELWGEM-----------KSFASSTSMNFDEELLD 709
P+ T+ S+ G A+ K E LW E+ KS +S + D LLD
Sbjct: 558 FHPDVGTYGSLANGI-ALARKPGEALLLWNEVKERCEVGKEGGKSDSSVPPLKPDGALLD 616
Query: 710 SVLYTFVRGGFFARANEVVAMMEEGKMFIDKYKYRTLFLKYHKTLYKGK-TPKFQTEAQL 768
++ VR FF +A E+VA MEE + +K K+ ++++ H ++ K + + + ++
Sbjct: 617 TIADICVRAAFFRKALEIVACMEENGIPPNKTKFTRIYVEMHSRMFTSKHASRARQDRRV 676
Query: 769 KKREAALGFKKWLGL 783
+++ AA FK WLGL
Sbjct: 677 ERKRAAEAFKFWLGL 691
>gi|125527993|gb|EAY76107.1| hypothetical protein OsI_04033 [Oryza sativa Indica Group]
Length = 262
Score = 183 bits (465), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 98/270 (36%), Positives = 151/270 (55%), Gaps = 10/270 (3%)
Query: 514 MHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQKD 573
M G VY+S+LKAY + R E L+ + +AG+QLDA Y+AL+ + + D
Sbjct: 1 MTAQGASVGLGVYSSILKAYCKEQRTAEAAQLVSEISAAGLQLDAGSYDALIDASMTAHD 60
Query: 574 TPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRIDCGVHDW 633
A LFKEM+E+++P + ++ G +N+ LMA L V + RI+ HDW
Sbjct: 61 FLSAFSLFKEMREARLP-DLRTSYLTIMTGLTENNRPELMASFLDTVVDDPRIEIATHDW 119
Query: 634 NNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEMK 693
N++IH FCK ++DA + +RM L + PN QT+ S++ GY + KY V LW E++
Sbjct: 120 NSIIHAFCKVGRLEDARRTYRRMVFLRYEPNNQTYLSLINGYVS-AEKYFSVLILWTEVR 178
Query: 694 SFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFIDKYKYRTLFLKYHKT 753
+F+ EL+D+ LY V+GGFF A +V+ +E K+F+DK++++ F++ HK
Sbjct: 179 ----RKGADFNHELIDAFLYALVKGGFFDMAMQVIEKAQELKIFLDKWRHKQAFMETHKK 234
Query: 754 LYKGKTPKFQTEAQLKKREAALGFKKWLGL 783
L K K +K EA + FK W GL
Sbjct: 235 LKVAKLRK----RNFRKMEALIAFKNWAGL 260
>gi|297829500|ref|XP_002882632.1| HCF152 [Arabidopsis lyrata subsp. lyrata]
gi|297328472|gb|EFH58891.1| HCF152 [Arabidopsis lyrata subsp. lyrata]
Length = 772
Score = 182 bits (461), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 173/704 (24%), Positives = 318/704 (45%), Gaps = 53/704 (7%)
Query: 101 INEHRYGDAWKLYEQHMQMDGFPRKTLVNKILTSFVESLDSKWLEKAYGLVEQAFEEGKQ 160
+ + +AW Y Q + P T ++++++ + L +A ++ + E +
Sbjct: 85 LRNRKTDEAWAKYVQSTHL---PGPTCLSRLVSQLSYQSKPESLTRAQSILTRLRNERQL 141
Query: 161 ILLEKEPLIYLSLGLSKCGLPVPASTILRKLVATEQYPPVTAWSAILAHMSLTAPGAYLA 220
L+ L L++ +K G + A ++++ ++ + P V AW+A +A SL+A G
Sbjct: 142 HRLDANSLGLLAMAAAKSGQTLYAVSVIKSMIRSGYLPHVKAWTAAVA--SLSAAGDDGP 199
Query: 221 AELILEIGYLFQDGRVDPRKKCNAPLIAM-KPNTNTFNIALAGCLLFETTRKAEQLLDIM 279
E I LF ++ + L+A +P+T FN L C T K +L D M
Sbjct: 200 EESI----KLFTAITRRVKRFGDQSLVAQSRPDTAAFNAVLNACANLGDTEKYWKLFDEM 255
Query: 280 PRIGVKADSNLLIIMAHIYERNGRREEL-RKLQRHIDEAVNLSDIQFRQFYNCLLSCHLK 338
+ D +M + R R+E + L+R ID+ + + + L++ ++
Sbjct: 256 SEWDCEPDVLTYNVMIKLCARVDRKELIVYVLERIIDKGIKVCMTTM----HSLVAAYVG 311
Query: 339 FGDLNSASKMVLEMLQRAKEARNSLAAAMLPFNAVGVNNRTPSEQNVNCTNSVDLEN-SG 397
FGDL +A ++V M +E R L + NA + + E + ++ + + SG
Sbjct: 312 FGDLRTAERIVQAM----REKRRDLCKVLRECNAEDLKEKEEEEAAEDDEDAFEDDEDSG 367
Query: 398 IIENHILSYEDFTKDRKFVALEAEVKRVLQTLLGMLQKQVELITTEHGILQPTEKIYIKL 457
+S E F E K++L + L + P +IY L
Sbjct: 368 YSARDEVSEEGF---------EDVFKKLLPNSVDPSGDPPLL----PKVFAPDSRIYTTL 414
Query: 458 VKAFLEAGKTKELTHFLIKAEKENLQVSH-DDAALGHVITLCISLGWLDQAHDLLDEMHL 516
+K +++ G+ + L +++ + SH D+ V++ + G +D+A +L EM
Sbjct: 415 MKGYMKNGRVADTARMLEAMRRQDDRNSHPDEVTYTTVVSAFVKAGLMDRARQVLAEMAR 474
Query: 517 AGVRASSSVYASLLKAYIEANRPREVTALLRD-ARSAGIQLDASCYEALLQSKIVQKDTP 575
GV A+ Y LLK Y + + LLR+ A AGI+ D Y ++ I+ D+
Sbjct: 475 MGVPANRITYNVLLKGYCKQLQIDRAEDLLREMAEDAGIEPDVVSYNIIIDGCILIDDSA 534
Query: 576 GALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRIDCGVHDWNN 635
GAL F EM+ I + + L+K A + + L ++ E+ R+ + WN
Sbjct: 535 GALAFFNEMRTRGIAPT-KISYTTLMKAFAMSGQPKLANRVFDEMMNDPRVKVDLIAWNM 593
Query: 636 VIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEMK-- 693
++ +C+ L++DA++ + RM+ G PN T+ S+ G ++ K E LW E+K
Sbjct: 594 LVEGYCRLGLIEDAQRVVSRMKENGFYPNVATYGSLANG-VSLARKPGEALLLWKEIKER 652
Query: 694 -------------SFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFIDK 740
S S + DE LLD++ VR FF +A E++A MEE + +K
Sbjct: 653 CEVKKKEAPSDSSSDPSPPMLKPDEGLLDTLADICVRAAFFKKALEIIACMEENGIPPNK 712
Query: 741 YKYRTLFLKYHKTLYKGK-TPKFQTEAQLKKREAALGFKKWLGL 783
KY+ ++++ H ++ K + + + +++++ AA FK WLGL
Sbjct: 713 TKYKKIYVEMHSRMFTSKHASQARIDRRVERKRAAEAFKFWLGL 756
>gi|15232734|ref|NP_187576.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75204290|sp|Q9SF38.1|PP222_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g09650, chloroplastic; AltName: Full=Protein HIGH
CHLOROPHYLL FLUORESCENCE 152; Flags: Precursor
gi|6682243|gb|AAF23295.1|AC016661_20 hypothetical protein [Arabidopsis thaliana]
gi|332641272|gb|AEE74793.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 778
Score = 181 bits (459), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 168/704 (23%), Positives = 315/704 (44%), Gaps = 54/704 (7%)
Query: 101 INEHRYGDAWKLYEQHMQMDGFPRKTLVNKILTSFVESLDSKWLEKAYGLVEQAFEEGKQ 160
+ + +AW Y Q + G T ++++++ + L +A ++ + E +
Sbjct: 92 LRNRKTDEAWAKYVQSTHLPG---PTCLSRLVSQLSYQSKPESLTRAQSILTRLRNERQL 148
Query: 161 ILLEKEPLIYLSLGLSKCGLPVPASTILRKLVATEQYPPVTAWSAILAHMSLTAP-GAYL 219
L+ L L++ +K G + A ++++ ++ + P V AW+A +A +S + G
Sbjct: 149 HRLDANSLGLLAMAAAKSGQTLYAVSVIKSMIRSGYLPHVKAWTAAVASLSASGDDGPEE 208
Query: 220 AAELILEIGYLFQDGRVDPRKKCNAPLIAM-KPNTNTFNIALAGCLLFETTRKAEQLLDI 278
+ +L + I RV ++ + L+ +P+T FN L C T K +L +
Sbjct: 209 SIKLFIAITR-----RV--KRFGDQSLVGQSRPDTAAFNAVLNACANLGDTDKYWKLFEE 261
Query: 279 MPRIGVKADSNLLIIMAHIYERNGRREELR-KLQRHIDEAVNLSDIQFRQFYNCLLSCHL 337
M + D +M + R GR+E + L+R ID+ + + + L++ ++
Sbjct: 262 MSEWDCEPDVLTYNVMIKLCARVGRKELIVFVLERIIDKGIKVCMTTM----HSLVAAYV 317
Query: 338 KFGDLNSASKMVLEMLQRAKEARNSLAAAMLPFNAVGVNNRTPSEQNVNCTNSVDLENSG 397
FGDL +A ++V M +E R L + NA + + E + D E+SG
Sbjct: 318 GFGDLRTAERIVQAM----REKRRDLCKVLRECNAEDLKEKEEEEAEDDEDAFEDDEDSG 373
Query: 398 IIENHILSYEDFTKDRKFVALEAEVKRVLQTLLGMLQKQVELITTEHGILQPTEKIYIKL 457
+S E V V + LL + P +IY L
Sbjct: 374 YSARDEVS-------------EEGVVDVFKKLLPNSVDPSGEPPLLPKVFAPDSRIYTTL 420
Query: 458 VKAFLEAGKTKELTHFLIKAEKENLQVSH-DDAALGHVITLCISLGWLDQAHDLLDEMHL 516
+K +++ G+ + L +++ + SH D+ V++ ++ G +D+A +L EM
Sbjct: 421 MKGYMKNGRVADTARMLEAMRRQDDRNSHPDEVTYTTVVSAFVNAGLMDRARQVLAEMAR 480
Query: 517 AGVRASSSVYASLLKAYIEANRPREVTALLRD-ARSAGIQLDASCYEALLQSKIVQKDTP 575
GV A+ Y LLK Y + + LLR+ AGI+ D Y ++ I+ D+
Sbjct: 481 MGVPANRITYNVLLKGYCKQLQIDRAEDLLREMTEDAGIEPDVVSYNIIIDGCILIDDSA 540
Query: 576 GALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRIDCGVHDWNN 635
GAL F EM+ I + + L+K A + + L ++ E+ R+ + WN
Sbjct: 541 GALAFFNEMRTRGIAPT-KISYTTLMKAFAMSGQPKLANRVFDEMMNDPRVKVDLIAWNM 599
Query: 636 VIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEMK-- 693
++ +C+ L++DA++ + RM+ G PN T+ S+ G + K + LW E+K
Sbjct: 600 LVEGYCRLGLIEDAQRVVSRMKENGFYPNVATYGSLANGVSQ-ARKPGDALLLWKEIKER 658
Query: 694 -------------SFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFIDK 740
S + + DE LLD++ VR FF +A E++A MEE + +K
Sbjct: 659 CAVKKKEAPSDSSSDPAPPMLKPDEGLLDTLADICVRAAFFKKALEIIACMEENGIPPNK 718
Query: 741 YKYRTLFLKYHKTLYKGK-TPKFQTEAQLKKREAALGFKKWLGL 783
KY+ ++++ H ++ K + + + +++++ AA FK WLGL
Sbjct: 719 TKYKKIYVEMHSRMFTSKHASQARIDRRVERKRAAEAFKFWLGL 762
>gi|449440377|ref|XP_004137961.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09650,
chloroplastic-like [Cucumis sativus]
gi|449483612|ref|XP_004156638.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09650,
chloroplastic-like [Cucumis sativus]
Length = 736
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 163/696 (23%), Positives = 307/696 (44%), Gaps = 79/696 (11%)
Query: 108 DAWKLYEQHMQMDGFPRKTLVNKILTSFVESLDSKWLEKAYGLVEQAFEEGKQILLEKEP 167
+AW Y Q + P T ++++++ L +A ++ + ++ + L+
Sbjct: 82 EAWITY---TQCNDLPSPTCLSRLVSQLSYQNTPSSLTRAQSILTRLRQDNQLHRLDANS 138
Query: 168 LIYLSLGLSKCGLPVPASTILRKLVATEQYPPVTAWSAILAHMSLTAPGAYLAAELILEI 227
L L++ +K G + A ++++ ++ + P V AWSA+++ ++ + AE I
Sbjct: 139 LGLLAVAAAKAGHTLYACSVIKSMLRSGYLPHVKAWSAVVSRLAASPDDG--PAEAIKLF 196
Query: 228 GYLFQDGR--VDPRKKCNAPLIAMKPNTNTFNIALAGCLLFETTRKAEQLLDIMPRIGVK 285
+ Q R DP ++ +P+T +N L C K QL + M G +
Sbjct: 197 SLVTQRLRRFADPTITADS-----RPDTAAYNGVLNACANMGAYEKFLQLFEEMEEFGAE 251
Query: 286 ADSNLLIIMAHIYERNGRREELRKLQRHIDEAVNLSDIQF-RQFYNCLLSCHLKFGDLNS 344
D +M + R R++ L ++ EA+ DI + +++ ++ FGDL +
Sbjct: 252 PDVLTYNVMIKLCARANRKD----LIVYVLEAILAKDIPMCMTTLHSVVAAYVGFGDLET 307
Query: 345 ASKMVLEMLQRAKEARNSLAAAMLPFNAVGVNNRTPSEQNVNCTNSVDLENSGIIENHIL 404
A K+V M + ++ L L + I
Sbjct: 308 AEKVVQAMREGKRDICRILRDGYL--------------------------------DEIE 335
Query: 405 SYEDFTKDRKFVALEAEV-KRVLQTLLGMLQKQVELITTEHGILQPTEKIYIKLVKAFLE 463
ED +D E E+ K++L L + + L+ I P +IY L+K ++
Sbjct: 336 DVEDLNED------EDELFKKLLPNLNEEIDSEPPLLPK---IYSPNSRIYTTLMKGYMN 386
Query: 464 AGKTKELTHFLIKAEKENLQVSHDD-AALGHVITLCISLGWLDQAHDLLDEMHLAGVRAS 522
G+ + L + + SH D + V++ + G +D+A +L EM G A+
Sbjct: 387 EGRVGDTIRMLEAMRNQGDRSSHPDHVSYTTVVSALVKAGSMDRARQVLAEMTRIGCPAN 446
Query: 523 SSVYASLLKAY---IEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALH 579
Y LLK Y ++ ++ +++ + D AGI+ D Y ++ I+ D+ GAL
Sbjct: 447 RITYNILLKGYCRLLQMDKAKDLFKEMVDG--AGIEPDVVSYNIMIDGSILVDDSAGALG 504
Query: 580 LFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRIDCGVHDWNNVIHF 639
F EM+ I + + L+K AQ+ + L K+ E+ R+ + WN +I
Sbjct: 505 FFNEMRSKGIAPT-KVSYTTLMKAFAQSGQPKLARKVFDEMLNDPRVKVDIVAWNMLIEG 563
Query: 640 FCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEMK------ 693
+C+ +++A++ +++M+ G P+ T+ S+ G ++ K E LW E+K
Sbjct: 564 YCRLGWIEEAKQLVQKMKENGFFPDVSTYGSLANGI-SLARKPGEALLLWNEVKERCAVR 622
Query: 694 -----SFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFIDKYKYRTLFL 748
+S + DE LLD++ VR FF +A E+VA MEE + +K KY +++
Sbjct: 623 RGYKSDSSSPPPLKPDEGLLDTLADICVRAAFFRKALEIVACMEENGIPPNKTKYSRIYV 682
Query: 749 KYHKTLYKGK-TPKFQTEAQLKKREAALGFKKWLGL 783
+ H ++ K K + + +++K+ AA FK WLGL
Sbjct: 683 EMHSRMFTSKHASKARQDRRIEKKRAAEAFKFWLGL 718
>gi|62320586|dbj|BAD95223.1| hypothetical protein [Arabidopsis thaliana]
Length = 778
Score = 180 bits (456), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 168/704 (23%), Positives = 315/704 (44%), Gaps = 54/704 (7%)
Query: 101 INEHRYGDAWKLYEQHMQMDGFPRKTLVNKILTSFVESLDSKWLEKAYGLVEQAFEEGKQ 160
+ + +AW Y Q + G T ++++++ + L +A ++ + E +
Sbjct: 92 LRNRKTDEAWAKYVQSTHLPG---PTCLSRLVSQLSYQSKPESLTRAQSILTRLRNERQL 148
Query: 161 ILLEKEPLIYLSLGLSKCGLPVPASTILRKLVATEQYPPVTAWSAILAHMSLTAP-GAYL 219
L+ L L++ +K G + A ++++ ++ + P V AW+A +A +S + G
Sbjct: 149 HRLDANSLGLLAMAAAKSGQTLYAVSVIKSMIRSGCLPHVKAWTAAVASLSASGDNGPEE 208
Query: 220 AAELILEIGYLFQDGRVDPRKKCNAPLIAM-KPNTNTFNIALAGCLLFETTRKAEQLLDI 278
+ +L + I RV ++ + L+ +P+T FN L C T K +L +
Sbjct: 209 SIKLFIAITR-----RV--KRFGDQSLVGQSRPDTAAFNAVLNACANLGDTDKYWKLFEE 261
Query: 279 MPRIGVKADSNLLIIMAHIYERNGRREELR-KLQRHIDEAVNLSDIQFRQFYNCLLSCHL 337
M + D +M + R GR+E + L+R ID+ + + + L++ ++
Sbjct: 262 MSEWDCEPDVLTYNVMIKLCARVGRKELIVFVLERIIDKGIKVCMTTM----HSLVAAYV 317
Query: 338 KFGDLNSASKMVLEMLQRAKEARNSLAAAMLPFNAVGVNNRTPSEQNVNCTNSVDLENSG 397
FGDL +A ++V M +E R L + NA + + E + D E+SG
Sbjct: 318 GFGDLRTAERIVQAM----REKRRDLCKVLRECNAEDLKEKEEEEAEDDEDAFEDDEDSG 373
Query: 398 IIENHILSYEDFTKDRKFVALEAEVKRVLQTLLGMLQKQVELITTEHGILQPTEKIYIKL 457
+S E V V + LL + P +IY L
Sbjct: 374 YSARDEVSEEG-------------VVDVFKKLLPNSVDPSGEPPLLPKVFAPDSRIYTTL 420
Query: 458 VKAFLEAGKTKELTHFLIKAEKENLQVSH-DDAALGHVITLCISLGWLDQAHDLLDEMHL 516
+K +++ G+ + L +++ + SH D+ V++ ++ G +D+A +L EM
Sbjct: 421 MKGYMKNGRVADTARMLEAMRRQDDRNSHPDEVTYTTVVSAFVNAGLMDRARQVLAEMAR 480
Query: 517 AGVRASSSVYASLLKAYIEANRPREVTALLRD-ARSAGIQLDASCYEALLQSKIVQKDTP 575
GV A+ Y LLK Y + + LLR+ AGI+ D Y ++ I+ D+
Sbjct: 481 MGVPANRITYNVLLKGYCKQLQIDRAEDLLREMTEDAGIEPDVVSYNIIIDGCILIDDSA 540
Query: 576 GALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRIDCGVHDWNN 635
GAL F EM+ I + + L+K A + + L ++ E+ R+ + WN
Sbjct: 541 GALAFFNEMRTRGIAPT-KISYTTLMKAFAMSGQPKLANRVFDEMMNDPRVKVDLIAWNM 599
Query: 636 VIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEMK-- 693
++ +C+ L++DA++ + RM+ G PN T+ S+ G + K + LW E+K
Sbjct: 600 LVEGYCRLGLIEDAQRVVSRMKENGFYPNVATYGSLANGVSQ-ARKPGDALLLWKEIKER 658
Query: 694 -------------SFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFIDK 740
S + + DE LLD++ VR FF +A E++A MEE + +K
Sbjct: 659 CAVKKKEAPSDSSSDPAPPMLKPDEGLLDTLADICVRAAFFKKALEIIACMEENGIPPNK 718
Query: 741 YKYRTLFLKYHKTLYKGK-TPKFQTEAQLKKREAALGFKKWLGL 783
KY+ ++++ H ++ K + + + +++++ AA FK WLGL
Sbjct: 719 TKYKKIYVEMHSRMFTSKHASQARIDRRVERKRAAEAFKFWLGL 762
>gi|297741482|emb|CBI32614.3| unnamed protein product [Vitis vinifera]
Length = 723
Score = 174 bits (440), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 166/687 (24%), Positives = 296/687 (43%), Gaps = 98/687 (14%)
Query: 101 INEHRYGDAWKLYEQHMQMDGFPRKTLVNKILTSFVESLDSKWLEKAYGLVEQAFEEGKQ 160
+ + + +AW Y Q Q+ P T ++++++ + L +A ++++ E +
Sbjct: 96 LRQRKTEEAWLTYVQCTQL---PSPTCLSRLVSQLSYQNTHQALTRAQSIIQRLRNERQL 152
Query: 161 ILLEKEPLIYLSLGLSKCGLPVPASTILRKLVATEQYPPVTAWSAILAHMSLTAPGAYLA 220
L+ L L++ +K G + A+++++ ++ + P V AWSA+++ ++ +
Sbjct: 153 HRLDANSLGLLAVSAAKAGHTLYAASLIKSMLRSGYLPHVKAWSAVVSRLAASGDDG--- 209
Query: 221 AELILEIGYLFQDGRVDPRKKCNAPLIA-MKPNTNTFNIALAGCLLFETTRKAEQLLDIM 279
LE LF + +A L+A +P+T +N L C T++ Q+ + M
Sbjct: 210 ---PLEALKLFDSVTRRIHRFTDATLVADSRPDTAAYNAVLNACANLGDTKRFLQVFEEM 266
Query: 280 PRIGVKADSNLLIIMAHIYERNGRREELR-KLQRHIDEAVNLSDIQFRQFYNCLLSCHLK 338
++G + D +M + R R++ L L+R +D+ + L + L++ ++
Sbjct: 267 TQLGAEPDVLTYNVMIKLCARVDRKDLLVFVLERILDKGIQLCMTTL----HSLVAAYVG 322
Query: 339 FGDLNSASKMVLEMLQRAKEARNSLAAAMLPFNAVGVNNRTPSEQNVNCTNSVDLENSGI 398
FGDL +A K+V Q +E R L + ++VN N +S I
Sbjct: 323 FGDLETAEKLV----QAMREGRQDLCKIL---------------RDVNSENPAYAPDSRI 363
Query: 399 IENHILSYEDFTKDRKFVALEAEVKRVLQTLLGMLQKQVELITTEHGILQPTEKIYIKLV 458
+T K E V ++ L M + + QP Y +V
Sbjct: 364 ----------YTTLMKGYMKEGRVTDTVRMLEAMRHQ-------DDSTSQPDHVTYTTVV 406
Query: 459 KAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQAHDLLDEMHLAG 518
A ++AG +D+A +L EM G
Sbjct: 407 SALVKAGS-------------------------------------MDRARQVLAEMTRIG 429
Query: 519 VRASSSVYASLLKAYIEANRPREVTALLRD-ARSAGIQLDASCYEALLQSKIVQKDTPGA 577
V A+ Y LLK Y E + + L+R+ GI D Y L+ I+ D+ GA
Sbjct: 430 VPANRVTYNILLKGYCEQLQIDKAKELVREMVDDEGIVPDVVSYNTLIDGCILVDDSAGA 489
Query: 578 LHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRIDCGVHDWNNVI 637
L F EM+ I + + L+K A + + L K+ E+ R+ + WN ++
Sbjct: 490 LAYFNEMRARGIAPT-KISYTTLMKAFALSGQPKLANKVFDEMLRDPRVKVDLVAWNMLV 548
Query: 638 HFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEMKSFAS 697
C+ L+++A+K ++RMR G PN T+ S+ G A+ K E LW E+K
Sbjct: 549 EAHCRLGLVEEAKKTVQRMRENGFYPNVATYGSLANGI-ALARKPGEALLLWNEVKERCP 607
Query: 698 STSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFIDKYKYRTLFLKYHKTLYKG 757
DE LLD++ VR FF +A E+VA MEE + +K KY ++++ H ++
Sbjct: 608 ------DEGLLDTLADICVRAAFFRKALEIVACMEENGIPPNKSKYTRIYVEMHSRMFTS 661
Query: 758 K-TPKFQTEAQLKKREAALGFKKWLGL 783
K K + + + +++ AA FK WLGL
Sbjct: 662 KHASKARQDRRSERKRAAEAFKFWLGL 688
>gi|147773546|emb|CAN61142.1| hypothetical protein VITISV_004317 [Vitis vinifera]
Length = 854
Score = 172 bits (436), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 144/493 (29%), Positives = 227/493 (46%), Gaps = 88/493 (17%)
Query: 295 AHIYERNGR-REELRKLQRHIDEAVNLSDIQFRQFYNCLLSCHLKFGDLNSASKMVLEML 353
+ I+E NG+ R +L+K + HID+ +R+FY+ LLS H F D++ A+ +VL+M
Sbjct: 445 SQIHEINGQLRLDLKKFKCHIDQVSIQLLRHYRKFYDSLLSLHFTFNDIDDAAGLVLDMC 504
Query: 354 QRAKEARNSLAAAMLPFNAVGVNNRTPSEQNVNCTNSVDLENSGIIENHILSYEDFTKDR 413
+ R+SL+ + +E C G I ++ L R
Sbjct: 505 R----CRDSLSI-----------RKDRNESYKTCL--------GPIGSYHL--------R 533
Query: 414 KFVALEAEVKRVLQ--TLLGMLQKQVELITTEHGILQPTEKIYIKLVKAFLEAGKTKELT 471
+ + ++ V +LQ ++ M KQ EL+ +G + K +KLV A+ G+ EL+
Sbjct: 534 EGLKIQI-VPELLQKDSVFKMDSKQ-ELVLFSNGKYVLSNKALVKLVIAYQGDGRIGELS 591
Query: 472 HFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLK 531
++ +KE L + VI CI LGWL+ AH +LD+M LAG SS Y SLL
Sbjct: 592 RLMLSLQKE-LGTLEGGGLISDVIDACIQLGWLETAHGILDDMELAGAPIGSSTYMSLLT 650
Query: 532 AYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPR 591
AY + RE ALL+ R AG +D S EM +
Sbjct: 651 AYYKGKMAREAKALLKQMRKAGFVVDLS----------------------DEMVMTTCLL 688
Query: 592 SGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEK 651
+ M + +GL L+QE+K+ ++ + E
Sbjct: 689 GVVDKNRMHTRTSTSIGNSGLAESLVQEMKKXEK-------------------XILPVET 729
Query: 652 ALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEMKSFASSTSMNFDEELLDSV 711
++ P QT ++V GY+ + Y E+T LWG +K S S+ +L + +
Sbjct: 730 EIE--------PTVQTSINLVYGYSCLN-MYREITILWGNIKRSRESGSLVVCRDLYEFL 780
Query: 712 LYTFVRGGFFARANEVVAMMEEGKMFIDKYKYRTLFLKYHKTLYKG-KTPKFQTEAQLKK 770
+ F+RGG+F R EV+ M+E M+ DK+ Y++ FLK+HK LY+ K +TEAQ K+
Sbjct: 781 VLNFLRGGYFERVMEVIGHMKEQNMYCDKWMYKSEFLKFHKDLYRNLKASNTRTEAQSKR 840
Query: 771 REAALGFKKWLGL 783
E F+KW G+
Sbjct: 841 LEYVEAFRKWAGI 853
>gi|326502598|dbj|BAJ98927.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 733
Score = 168 bits (425), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 142/548 (25%), Positives = 257/548 (46%), Gaps = 61/548 (11%)
Query: 251 PNTNTFNIALAGCLLFETTRKAEQLLDIMPRIGVKADSNLLIIMA-HIYERNGRREEL-R 308
P+T FN L+ C R+ QL D M A L +A + R GRR+ + R
Sbjct: 206 PDTAAFNAVLSACADAGDCRRFRQLFDEMRSWPSAAPDALTYNVAIKMCARAGRRDLVAR 265
Query: 309 KLQRHIDEAVNLSDIQFRQFYNCLLSCHLKFGDLNSASKMVLEMLQRAKEARNSLAAAML 368
L+R + + F + L++ ++ FGD+ +A ++V M +E R+ + +L
Sbjct: 266 VLERILSSGIAPCATTF----HSLVAAYVGFGDIPTAERIVQAM----REGRSDVCL-LL 316
Query: 369 PFNAVGVNNRTPSEQNVNCTNSVDLENSGIIENHILSYEDFTKDRKFVALEAEVKRVLQT 428
AV N+ E+ + +++ H VL+
Sbjct: 317 RHVAVEGND----EKGIAVI---------VVDEH--------------------SDVLED 343
Query: 429 LLGMLQKQVELITTEHGILQPTEKIYIKLVKAFLEAGKTKELTHFL--IKAEKENLQVSH 486
++G ++ + P ++Y L+K ++ AG+ ++ ++ E E + S
Sbjct: 344 IVGPKPEEGSEVPLLSRTYPPNSRVYTTLMKGYMNAGRVDDVVAMARAMRREGETMPASR 403
Query: 487 DD-AALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAY---IEANRPREV 542
D V++ + G +++AH +LDEM AGV AS Y L+K Y ++ +R RE+
Sbjct: 404 PDHVTYTTVVSTLAAAGDMERAHAVLDEMARAGVPASRVTYNVLIKGYCQQLQMSRAREL 463
Query: 543 TALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVK 602
L AGI+ D Y L+ ++ D+ GAL LF EM+ + S + L+K
Sbjct: 464 --LEEMTTDAGIEADVVTYNTLIDGCVLMDDSAGALALFNEMRARGVAPST-VSYTTLMK 520
Query: 603 GCAQNHEAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHL 662
A + + + + +E+++ R+ WN ++ +C++ +++ A++ ++RM+ G
Sbjct: 521 AFAASGQPKVAHNVFEEMEKDPRVTVDRPAWNMLVEGYCQQGMLETAKQTVERMKESGVQ 580
Query: 663 PNAQTFHSMVTGYAAIGGKYTEVTELWGEMKSFASSTSMNF------DEELLDSVLYTFV 716
P+ T+ S+ G A + K E LW E+K + S N DEELLD++ V
Sbjct: 581 PDVATYGSLAKGIA-VARKPGEALLLWNEVKERCEAGSGNGKPGLRPDEELLDALADVCV 639
Query: 717 RGGFFARANEVVAMMEEGKMFIDKYKYRTLFLKYHKTLYKGK-TPKFQTEAQLKKREAAL 775
RG FF +A E+VA MEE + +K KY+ ++++ H ++ K + + + + +++ AA
Sbjct: 640 RGAFFKKALEIVACMEENGIAPNKTKYKKIYIEMHSRMFTSKHASQARQDRRRERKRAAE 699
Query: 776 GFKKWLGL 783
FK WLGL
Sbjct: 700 AFKFWLGL 707
>gi|115483719|ref|NP_001065521.1| Os11g0103000 [Oryza sativa Japonica Group]
gi|77548314|gb|ABA91111.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
gi|113644225|dbj|BAF27366.1| Os11g0103000 [Oryza sativa Japonica Group]
Length = 543
Score = 166 bits (421), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 142/541 (26%), Positives = 253/541 (46%), Gaps = 69/541 (12%)
Query: 251 PNTNTFNIALAGCLLFETTRKAEQLLDIMPRIGVKADSNLLIIMAHIYERNGRREEL-RK 309
P+T FN AL+ C + L D MP D+ ++ + R GR++ + R
Sbjct: 47 PDTAAFNAALSACADAGDCIRFRHLFDQMPAWNAPPDALTYNVLIKMCARAGRKDLVARV 106
Query: 310 LQRHIDEAVNLSDIQFRQFYNCLLSCHLKFGDLNSASKMVLEMLQRAKEARNSLAAAMLP 369
L R + + F + L++ ++ FGD+ +A ++V M +E R + L
Sbjct: 107 LHRILSSGLTPCATTF----HSLVAAYVGFGDIPTAERIVQAM----RERRTDIC---LL 155
Query: 370 FNAVGVNNRTPSEQNVNCTNSVDLENSGIIENHILSYEDFTKDRKFVALEAEVKRVLQTL 429
F AV ++HI+S+ D++ LE VK Q
Sbjct: 156 FRAVA-------------------------DDHIISH-----DQQSCVLEDIVKPWEQDE 185
Query: 430 LGMLQKQVELITTEHGILQPTEKIYIKLVKAFLEAGKTKELTHFL--IKAEKENLQVSHD 487
+ +L K P ++Y L+K ++ AG+ +++ L ++ E E S
Sbjct: 186 VPLLPKA----------YPPNSRVYTTLMKGYMNAGRVEDVVAMLRAMRREGETSPASRP 235
Query: 488 D-AALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAY---IEANRPREVT 543
D VI+ ++ G +++A +L+EM AGV AS Y L+K Y ++A + +E+
Sbjct: 236 DHVTYTTVISTLVAAGDMERARAVLEEMGQAGVAASRVTYNVLIKGYCQQLQAGKAKELL 295
Query: 544 ALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKG 603
A+ D AGIQ D Y L+ ++ D+ GA+ LF EM+E I S + L+K
Sbjct: 296 AV--DMAEAGIQPDVVTYNTLIDGCVLTDDSAGAVALFNEMRERGIAPSA-VSYTTLMKA 352
Query: 604 CAQNHEAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLP 663
A + + L K+ E+++ R+ WN ++ +C+ L++ A+K ++RM++ G P
Sbjct: 353 FAASGQPKLAHKVFDEMEKDPRVAVDRAAWNMLVEAYCRLGLLESAKKVVERMKARGVQP 412
Query: 664 NAQTFHSMVTGYAAIGGKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFAR 723
+ T+ S+ G A+ + E LW E+K D E+++++ VR F +
Sbjct: 413 DVATYGSLAKGI-AVARRPGEALLLWEEIK------EKEVDGEVVEALADVCVRAALFRK 465
Query: 724 ANEVVAMMEEGKMFIDKYKYRTLFLKYHKTLYKGK-TPKFQTEAQLKKREAALGFKKWLG 782
A E+VA MEE + +K KY+ +++ H ++ K + + + + +++ AA FK WLG
Sbjct: 466 ALEMVARMEEMGVEPNKAKYKRMYVDLHSRMFTSKHASQARQDRRRERKRAAEAFKFWLG 525
Query: 783 L 783
L
Sbjct: 526 L 526
>gi|255568420|ref|XP_002525184.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223535481|gb|EEF37150.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 740
Score = 166 bits (420), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 171/701 (24%), Positives = 312/701 (44%), Gaps = 78/701 (11%)
Query: 109 AWKLYEQHMQMDGFPRKTLVNKILTSFVESLDSKWLEKAYGLVEQAFEEGKQILLEKEPL 168
AW Y Q + P T ++++++ L +A ++ + +E + L+ L
Sbjct: 76 AWIFYSQSPLL---PNPTCLSRLVSQLSYQNTPLSLSRAQSILTRLRQERQLHRLDANSL 132
Query: 169 IYLSLGLSKCGLPVPASTILRKLVATEQYPPVTAWSAILAHMSLTAP--GAYLAAELILE 226
L++ +K G A +++ ++ + P V AWSA+++ +S ++P G A +L
Sbjct: 133 GLLAVSATKSGQLSYAVSLINSMLRSGYLPHVKAWSAVISRLS-SSPDDGPQQAIKLFNS 191
Query: 227 IGYLFQDGRVDPRKKCNAPLIA-MKPNTNTFNIALAGCLLFETTRKAEQLLDIMPRIGVK 285
I RV R+ +A L+A P+T FN L C + QL D M G +
Sbjct: 192 ITR-----RV--RRFNDAALVADSNPDTAAFNSVLNACANLGDGKMFLQLFDQMSEFGAE 244
Query: 286 ADSNLLIIMAHIYERNGRREELR-KLQRHIDEAVNLSDIQFRQFYNCLLSCHLKFGDLNS 344
D +M + R R++ L L+R I + + L + L++ ++ FGDL +
Sbjct: 245 PDILTYNVMIKLCARCDRKDLLVFVLERVIQKRIPLCMTTL----HSLVAAYVGFGDLET 300
Query: 345 ASKMVLEMLQRAKEARNSLAAAMLPFNAVGVNNRTPSEQNVNCTNSVDLENSGII-ENHI 403
A M Q +E R L + V++E+ G E+ I
Sbjct: 301 AEIMA----QAMREGRRDLCKIL---------------------REVNMEDLGYYGEDVI 335
Query: 404 LSYEDFTKDRKFVALEAEVKRVLQTLLGMLQKQVELITTEHGILQ----PTEKIYIKLVK 459
+ + ++RK + + + +L ++ TE +L P +IY L+K
Sbjct: 336 ENSQRLDQNRKNMFVFEK----------LLPNSIQSGDTEPSLLPKVYAPDSRIYTTLMK 385
Query: 460 AFLEAGKTKELTHFLIKAEKENLQVSHDD-AALGHVITLCISLGWLDQAHDLLDEMHLAG 518
++ G+ + L ++ SH D + VI+ + G +D+A +L EM G
Sbjct: 386 GYMNQGRVSDTIRMLEAMRHQDDNASHPDHVSYTTVISALVKAGSMDRARQVLAEMTRIG 445
Query: 519 VRASSSVYASLLKAYIEANRPREVTALLRDA-RSAGIQLDASCYEALLQSKIVQKDTPGA 577
V A+ Y LLK + + + + LL++ +A I+ D Y ++ I D+ GA
Sbjct: 446 VPANRITYNILLKGHCQHLQIDKAKELLKEMDENAEIEPDVVSYNTMIDGCIQVDDSAGA 505
Query: 578 LHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRIDCGVHDWNNVI 637
L F EM+E I + + L+K + + + L ++ E+ + R+ + WN ++
Sbjct: 506 LAFFNEMREKGIAPT-KISYTTLMKAFSLSGQPKLANQVFDEMFKDPRVKVDLIAWNVLV 564
Query: 638 HFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEMK---- 693
+CK L++ A+K ++RM+ G PN T+ S+ +G A+ K E LW E+K
Sbjct: 565 EAYCKLGLVEQAKKIIQRMKENGFHPNVATYGSLASGI-ALARKPGEALILWNEVKERLE 623
Query: 694 ----------SFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFIDKYKY 743
+ DE +LD++ VR F +A E+VA MEE +F +K KY
Sbjct: 624 MQKEGHNSKSDLPPPPAFKPDEGMLDTLADICVRAALFQKALEIVACMEENGIFPNKMKY 683
Query: 744 RTLFLKYHKTLYKGK-TPKFQTEAQLKKREAALGFKKWLGL 783
+ ++++ H ++ K + + + + +++ AA FK WLGL
Sbjct: 684 KKIYVEMHSRMFTSKHASQARVDRRRERKRAAEAFKFWLGL 724
>gi|77552783|gb|ABA95579.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 697
Score = 166 bits (420), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 141/541 (26%), Positives = 252/541 (46%), Gaps = 69/541 (12%)
Query: 251 PNTNTFNIALAGCLLFETTRKAEQLLDIMPRIGVKADSNLLIIMAHIYERNGRREEL-RK 309
P+T FN AL+ C + L D MP D+ ++ + R GR++ + R
Sbjct: 201 PDTAAFNAALSACANAGDCIRFRHLFDQMPAWNAPPDALTYNVLIKMCARAGRKDLVARV 260
Query: 310 LQRHIDEAVNLSDIQFRQFYNCLLSCHLKFGDLNSASKMVLEMLQRAKEARNSLAAAMLP 369
L R + + F + L++ ++ FGD+ +A ++V M +R + L
Sbjct: 261 LHRILSSGLTPCATTF----HSLVAAYVGFGDIPTAERIVQAMRERRTDI-------CLL 309
Query: 370 FNAVGVNNRTPSEQNVNCTNSVDLENSGIIENHILSYEDFTKDRKFVALEAEVKRVLQTL 429
F AV ++HI+S+ D++ LE VK Q
Sbjct: 310 FRAVA-------------------------DDHIISH-----DQQSCVLEDIVKPWEQEE 339
Query: 430 LGMLQKQVELITTEHGILQPTEKIYIKLVKAFLEAGKTKELTHFL--IKAEKENLQVSHD 487
+ +L K P ++Y L+K ++ AG+ +++ L ++ E E S
Sbjct: 340 VPLLPKAYP----------PNSRVYTTLMKGYMNAGRVEDVVAMLRAMRREGETSPASRP 389
Query: 488 D-AALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAY---IEANRPREVT 543
D VI+ ++ G +++A +L+EM AGV AS Y L+K Y ++A + +E+
Sbjct: 390 DHVTYTTVISTLVAAGDMERARAVLEEMGQAGVAASRVTYNVLIKGYCQQLQAGKAKELL 449
Query: 544 ALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKG 603
A+ D AGIQ D Y L+ ++ D+ GA+ LF EM+E I S + L+K
Sbjct: 450 AV--DMAEAGIQPDVVTYNTLIDGCVLTDDSAGAVALFNEMRERGIAPSA-VSYTTLMKA 506
Query: 604 CAQNHEAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLP 663
A + + L K+ E+++ R+ WN ++ +C+ L++ A+K ++RM++ G P
Sbjct: 507 FAASGQPKLAHKVFDEMEKDPRVAVDRAAWNMLVEAYCRLGLLESAKKVVERMKARGVQP 566
Query: 664 NAQTFHSMVTGYAAIGGKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFAR 723
+ T+ S+ G A+ + E LW E+K D E+++++ VR F +
Sbjct: 567 DVATYGSLAKGI-AVARRPGEALLLWEEIK------EKEVDGEVVEALADVCVRAALFRK 619
Query: 724 ANEVVAMMEEGKMFIDKYKYRTLFLKYHKTLYKGK-TPKFQTEAQLKKREAALGFKKWLG 782
A E+VA MEE + +K KY+ +++ H ++ K + + + + +++ AA FK WLG
Sbjct: 620 ALEMVARMEEMGVEPNKAKYKRMYVDLHSRMFTSKHASQARQDRRRERKRAAEAFKFWLG 679
Query: 783 L 783
L
Sbjct: 680 L 680
>gi|115486864|ref|NP_001065238.1| Os12g0102600 [Oryza sativa Japonica Group]
gi|113648426|dbj|BAF28938.1| Os12g0102600, partial [Oryza sativa Japonica Group]
Length = 712
Score = 166 bits (420), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 141/541 (26%), Positives = 252/541 (46%), Gaps = 69/541 (12%)
Query: 251 PNTNTFNIALAGCLLFETTRKAEQLLDIMPRIGVKADSNLLIIMAHIYERNGRREEL-RK 309
P+T FN AL+ C + L D MP D+ ++ + R GR++ + R
Sbjct: 216 PDTAAFNAALSACANAGDCIRFRHLFDQMPAWNAPPDALTYNVLIKMCARAGRKDLVARV 275
Query: 310 LQRHIDEAVNLSDIQFRQFYNCLLSCHLKFGDLNSASKMVLEMLQRAKEARNSLAAAMLP 369
L R + + F + L++ ++ FGD+ +A ++V M +R + L
Sbjct: 276 LHRILSSGLTPCATTF----HSLVAAYVGFGDIPTAERIVQAMRERRTDI-------CLL 324
Query: 370 FNAVGVNNRTPSEQNVNCTNSVDLENSGIIENHILSYEDFTKDRKFVALEAEVKRVLQTL 429
F AV ++HI+S+ D++ LE VK Q
Sbjct: 325 FRAVA-------------------------DDHIISH-----DQQSCVLEDIVKPWEQEE 354
Query: 430 LGMLQKQVELITTEHGILQPTEKIYIKLVKAFLEAGKTKELTHFL--IKAEKENLQVSHD 487
+ +L K P ++Y L+K ++ AG+ +++ L ++ E E S
Sbjct: 355 VPLLPKAYP----------PNSRVYTTLMKGYMNAGRVEDVVAMLRAMRREGETSPASRP 404
Query: 488 D-AALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAY---IEANRPREVT 543
D VI+ ++ G +++A +L+EM AGV AS Y L+K Y ++A + +E+
Sbjct: 405 DHVTYTTVISTLVAAGDMERARAVLEEMGQAGVAASRVTYNVLIKGYCQQLQAGKAKELL 464
Query: 544 ALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKG 603
A+ D AGIQ D Y L+ ++ D+ GA+ LF EM+E I S + L+K
Sbjct: 465 AV--DMAEAGIQPDVVTYNTLIDGCVLTDDSAGAVALFNEMRERGIAPSA-VSYTTLMKA 521
Query: 604 CAQNHEAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLP 663
A + + L K+ E+++ R+ WN ++ +C+ L++ A+K ++RM++ G P
Sbjct: 522 FAASGQPKLAHKVFDEMEKDPRVAVDRAAWNMLVEAYCRLGLLESAKKVVERMKARGVQP 581
Query: 664 NAQTFHSMVTGYAAIGGKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFAR 723
+ T+ S+ G A+ + E LW E+K D E+++++ VR F +
Sbjct: 582 DVATYGSLAKGI-AVARRPGEALLLWEEIK------EKEVDGEVVEALADVCVRAALFRK 634
Query: 724 ANEVVAMMEEGKMFIDKYKYRTLFLKYHKTLYKGK-TPKFQTEAQLKKREAALGFKKWLG 782
A E+VA MEE + +K KY+ +++ H ++ K + + + + +++ AA FK WLG
Sbjct: 635 ALEMVARMEEMGVEPNKAKYKRMYVDLHSRMFTSKHASQARQDRRRERKRAAEAFKFWLG 694
Query: 783 L 783
L
Sbjct: 695 L 695
>gi|125535459|gb|EAY81947.1| hypothetical protein OsI_37125 [Oryza sativa Indica Group]
Length = 697
Score = 165 bits (418), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 141/541 (26%), Positives = 252/541 (46%), Gaps = 69/541 (12%)
Query: 251 PNTNTFNIALAGCLLFETTRKAEQLLDIMPRIGVKADSNLLIIMAHIYERNGRREEL-RK 309
P+T FN AL+ C + L D MP D+ ++ + R GR++ + R
Sbjct: 201 PDTAAFNAALSACADAGDCIRFRHLFDQMPAWNAPPDALTYNVLIKMCARAGRKDLVARV 260
Query: 310 LQRHIDEAVNLSDIQFRQFYNCLLSCHLKFGDLNSASKMVLEMLQRAKEARNSLAAAMLP 369
L R + + F + L++ ++ FGD+ +A ++V M +R + L
Sbjct: 261 LHRILSSGLTPCATTF----HSLVAAYVGFGDIPTAERIVQAMRERRTDI-------CLL 309
Query: 370 FNAVGVNNRTPSEQNVNCTNSVDLENSGIIENHILSYEDFTKDRKFVALEAEVKRVLQTL 429
F AV ++HI+S+ D++ LE VK Q
Sbjct: 310 FRAVA-------------------------DDHIISH-----DQQSCVLEDIVKPWEQDE 339
Query: 430 LGMLQKQVELITTEHGILQPTEKIYIKLVKAFLEAGKTKELTHFL--IKAEKENLQVSHD 487
+ +L K P ++Y L+K ++ AG+ +++ L ++ E E S
Sbjct: 340 VPLLPKAYP----------PNSRVYTTLMKGYMNAGRVEDVVAMLRAMRREGETSPASRP 389
Query: 488 D-AALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAY---IEANRPREVT 543
D VI+ ++ G +++A +L+EM AGV AS Y L+K Y ++A + +E+
Sbjct: 390 DHVTYTTVISTLVAAGDMERARAVLEEMGQAGVAASRVTYNVLIKGYCQQLQAGKAKELL 449
Query: 544 ALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKG 603
A+ D AGIQ D Y L+ ++ D+ GA+ LF EM+E I S + L+K
Sbjct: 450 AV--DMAEAGIQPDVVTYNTLIDGCVLTDDSAGAVALFNEMRERGIAPSA-VSYTTLMKA 506
Query: 604 CAQNHEAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLP 663
A + + L K+ E+++ R+ WN ++ +C+ L++ A+K ++RM++ G P
Sbjct: 507 FAASGQPKLAHKVFDEMEKDPRVAVDRAAWNMLVEAYCRLGLLESAKKVVERMKARGVQP 566
Query: 664 NAQTFHSMVTGYAAIGGKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFAR 723
+ T+ S+ G A+ + E LW E+K D E+++++ VR F +
Sbjct: 567 DVATYGSLAKGI-AVARRPGEALLLWEEIK------EKEVDGEVVEALADVCVRAALFRK 619
Query: 724 ANEVVAMMEEGKMFIDKYKYRTLFLKYHKTLYKGK-TPKFQTEAQLKKREAALGFKKWLG 782
A E+VA MEE + +K KY+ +++ H ++ K + + + + +++ AA FK WLG
Sbjct: 620 ALEMVARMEEMGVEPNKAKYKRMYVDLHSRMFTSKHASQARQDRRRERKRAAEAFKFWLG 679
Query: 783 L 783
L
Sbjct: 680 L 680
>gi|168036356|ref|XP_001770673.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162678034|gb|EDQ64497.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 717
Score = 162 bits (410), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 101/341 (29%), Positives = 178/341 (52%), Gaps = 6/341 (1%)
Query: 447 LQPTEKIYIKLVKAFLEAGKTKELTHFLIKAE-KENLQVSHDDAALGHVITLCISLGWLD 505
L+P + Y L+K +++ G+ + L+ + ++ + S ++ + I+ C+ LG +D
Sbjct: 365 LRPDVRTYTTLMKGYVQKGRRSDAMRTLLAMQMDKDPRSSPNEVSYTTAISSCVRLGLMD 424
Query: 506 QAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALL 565
+A +L EM + + Y LLK Y A + ++ ++++D AG+ LD Y L+
Sbjct: 425 EATVVLQEMLKHNIPVNVITYNILLKGYCSARKLQKAHSVVKDMEEAGVALDVVSYNTLI 484
Query: 566 QSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQR 625
I D AL FK+M+E+ I S + L+K +N + + + +E++ R
Sbjct: 485 NGCIETGDNAAALDYFKKMRETGISPSA-VSYTTLMKAFGRNGQPKQVHLVFEEMRNDPR 543
Query: 626 IDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEV 685
+ WN ++ +C+ + DA++ +M+ LP A T+ ++V GY A+GG EV
Sbjct: 544 MKTDAVAWNVLLDSYCRNGRVADAKRMFLQMKEDRVLPTAFTYATLVKGY-ALGGMLGEV 602
Query: 686 TELWGEMKSFASS--TSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFIDKYKY 743
LW E+K + DE LL+ ++ T VR G+F +A EVVA MEE + +K KY
Sbjct: 603 LVLWKEIKERTDDEVNPLQPDEVLLNCLVDTCVRAGYFQKALEVVACMEEKGIPANKTKY 662
Query: 744 RTLFLKYHKTLYKGK-TPKFQTEAQLKKREAALGFKKWLGL 783
+ +F++ + LY GK + + + +KR+A FK WLGL
Sbjct: 663 KRIFIELYSNLYTGKHASQRRRDRSEEKRDAVEAFKFWLGL 703
Score = 99.8 bits (247), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 122/552 (22%), Positives = 230/552 (41%), Gaps = 46/552 (8%)
Query: 89 DPAKLSAEIENAINEHRYGDAWKLYEQHMQMDGFPRKTLVNKILTSFVESLDSKWLEKAY 148
D A L E+ + + + R +AW++ + + FP + ++++ L +A
Sbjct: 88 DDANLIEEMRDLLKQRRTDEAWQVMQLLSRSGKFPDRQCTSRLVAQLSHRGVPSCLARAQ 147
Query: 149 GLVEQAFEEGKQILLEKEPLIYLSLGLSKCGLPVPASTILRKLVATEQYPPVTAWSAILA 208
++ + + LL+ + L L+L ++ G A +L + + YP V WSA+++
Sbjct: 148 QVLTNLRKNNQVDLLDSDSLGLLALASARSGAARYALNVLNLMFEMDIYPSVKVWSAVVS 207
Query: 209 HMSLTAPGAYLAAELILEIGYLFQDGR---VDPRKKCNAPLIAMKPNTNTFNIALAGCLL 265
+ LA EL E+ L ++ +D R + +P+T FN AL C
Sbjct: 208 RLGRHVDDCLLALELFDEVCRLIEEAESQGIDVR--------SARPDTGAFNAALNACAT 259
Query: 266 FETTRKAEQLLDIMPRIGVKADSNLLIIMAHIYERNGRREELRKLQRHIDEAVNLSDIQF 325
K E L++ M R G++ DS + +Y + +R+ L+ L DE V +
Sbjct: 260 LGFAAKGEDLMNSMRRCGLQPDSITFNTLIKLYAKCDQRKLLKSLP---DEMVENKVMPD 316
Query: 326 RQFYNCLLSCHLKFGDLNSASKMVLEMLQRAKEARNSLAAAMLPFNA------------- 372
N L++ ++ GDL A ++ + ++++ +S + + A
Sbjct: 317 ESTVNSLIAGYVGLGDLREAEALLRRLQDKSEQGNDSKTKSKSWWGAHLRPDVRTYTTLM 376
Query: 373 VGVNNRTPSEQNVNCTNSVDLENSGIIENHILSYEDFTKDRKFVALEAEVKRVLQTLLGM 432
G + + ++ ++ + +SY + L E VLQ +L
Sbjct: 377 KGYVQKGRRSDAMRTLLAMQMDKDPRSSPNEVSYTTAISSCVRLGLMDEATVVLQEML-- 434
Query: 433 LQKQVELITTEHGILQPTEKI-YIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAAL 491
+H I P I Y L+K + A K ++ H ++K + E V+ D +
Sbjct: 435 ----------KHNI--PVNVITYNILLKGYCSARKLQK-AHSVVK-DMEEAGVALDVVSY 480
Query: 492 GHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARS 551
+I CI G A D +M G+ S+ Y +L+KA+ +P++V + + R+
Sbjct: 481 NTLINGCIETGDNAAALDYFKKMRETGISPSAVSYTTLMKAFGRNGQPKQVHLVFEEMRN 540
Query: 552 -AGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEA 610
++ DA + LL S A +F +MKE ++ + + LVKG A
Sbjct: 541 DPRMKTDAVAWNVLLDSYCRNGRVADAKRMFLQMKEDRVLPTAFT-YATLVKGYALGGML 599
Query: 611 GLMAKLLQEVKE 622
G + L +E+KE
Sbjct: 600 GEVLVLWKEIKE 611
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 70/373 (18%), Positives = 134/373 (35%), Gaps = 95/373 (25%)
Query: 469 ELTHFLIKAEKENLQVSH---DDAALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSV 525
E+ + +AE + + V D A + C +LG+ + DL++ M G++ S
Sbjct: 225 EVCRLIEEAESQGIDVRSARPDTGAFNAALNACATLGFAAKGEDLMNSMRRCGLQPDSIT 284
Query: 526 YASLLKAYIEANRP-----------------------------------REVTALLR--- 547
+ +L+K Y + ++ RE ALLR
Sbjct: 285 FNTLIKLYAKCDQRKLLKSLPDEMVENKVMPDESTVNSLIAGYVGLGDLREAEALLRRLQ 344
Query: 548 -------DARS-------AGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSG 593
D+++ A ++ D Y L++ + + A+ M+ K PRS
Sbjct: 345 DKSEQGNDSKTKSKSWWGAHLRPDVRTYTTLMKGYVQKGRRSDAMRTLLAMQMDKDPRSS 404
Query: 594 HQE--FEMLVKGCAQNHEAGLMAK---LLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQD 648
E + + C + GLM + +LQE+ + I V +N ++ +C R +Q
Sbjct: 405 PNEVSYTTAISSCVR---LGLMDEATVVLQEMLK-HNIPVNVITYNILLKGYCSARKLQK 460
Query: 649 AEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGK---------------------YTEVTE 687
A +K M G + ++++++ G G YT + +
Sbjct: 461 AHSVVKDMEEAGVALDVVSYNTLINGCIETGDNAAALDYFKKMRETGISPSAVSYTTLMK 520
Query: 688 LWGE----------MKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMF 737
+G + + M D + +L ++ R G A A + M+E ++
Sbjct: 521 AFGRNGQPKQVHLVFEEMRNDPRMKTDAVAWNVLLDSYCRNGRVADAKRMFLQMKEDRVL 580
Query: 738 IDKYKYRTLFLKY 750
+ Y TL Y
Sbjct: 581 PTAFTYATLVKGY 593
>gi|359474426|ref|XP_003631463.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g17616-like [Vitis vinifera]
Length = 486
Score = 159 bits (403), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 96/262 (36%), Positives = 158/262 (60%), Gaps = 5/262 (1%)
Query: 91 AKLSAEIENAINEHRYGDAWKLYEQHMQMDGFPRKTLVNKILTSFVESLDSKWLEKAYGL 150
A L ++E A+ +H+ +AW+ ++ ++ GFP +LV++++T S + WL+KA L
Sbjct: 27 AVLLRKLEIALKDHQVDEAWETFKDIKRLYGFPSHSLVSRLITELSYSSNPHWLQKACDL 86
Query: 151 VEQAFEEGKQILLEKEPLIYLSLGLSKCGLPVPASTILRKLVATEQYPPVTAWSAILAHM 210
V +E K LL + L LSL LS+ +P+PAS ILR ++ P I+ HM
Sbjct: 87 VYLILKE-KSDLLHSDSLTKLSLSLSRAQMPIPASMILRLMLEKGSVPQKNVLWLIILHM 145
Query: 211 SLTAPGAYLAAELILEIGYLFQDGRVDPRKKCNAPLIAMKPNTNTFNIALAGCLLFETTR 270
T G YLA+ +++I F + K +A LI KP+T FN+ L C+ F ++
Sbjct: 146 VKTEIGTYLASNYLVQICDHFL--LLSASKSNHAKLI--KPDTMIFNLVLDACVRFGSSF 201
Query: 271 KAEQLLDIMPRIGVKADSNLLIIMAHIYERNGRREELRKLQRHIDEAVNLSDIQFRQFYN 330
K +Q++++MP++GV AD++ +II+A I+E NG+R++L+K + HID+ +RQFY+
Sbjct: 202 KGQQIIELMPQVGVGADAHSIIIIAQIHEMNGQRDDLKKFKCHIDQVSIQLACHYRQFYD 261
Query: 331 CLLSCHLKFGDLNSASKMVLEM 352
LLS H KF D++ A+ +VL+M
Sbjct: 262 SLLSLHFKFNDIDGAAGLVLDM 283
>gi|357155605|ref|XP_003577175.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09650,
chloroplastic-like [Brachypodium distachyon]
Length = 725
Score = 159 bits (401), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 135/554 (24%), Positives = 256/554 (46%), Gaps = 56/554 (10%)
Query: 239 RKKCNAPLIAMKPNTNTFNIALAGCLLFETTRKAEQLLDIMPRIGVKADSNLLI--IMAH 296
R+ +AP ++ P+T FN AL+ C R+ +L D M G A+ +++ +
Sbjct: 193 RRTTDAPASSL-PDTAAFNAALSACADAGDCRRFRRLFDEMRAWGAAAEPDVVTYNVAIK 251
Query: 297 IYERNGRREELRKLQRHIDEAVNLSDIQFRQFYNCLLSCHLKFGDLNSASKMVLEMLQRA 356
+ R GR++ + ++ I A D ++ +++ ++ D+ +A +V M
Sbjct: 252 MCARAGRKDLVARVLPRILAAGLAPDATT---FHSIVAAYVGLRDIPAAEAVVQAM---- 304
Query: 357 KEARNSLAAAMLPFNAVGVNNRTPSEQNVNCTNSVDLENSGIIENHILSYEDFTKDRKFV 416
R+ A L + + + S+ + E+S ++E+ ++ +
Sbjct: 305 ---RDRRADLCLLLRQLPSSPSSSSDAD---------EHSHVLEDIVVGDD--------- 343
Query: 417 ALEAEVKRVLQTLLGMLQKQVELITTEHGILQPTEKIYIKLVKAFLEAGKTKELTHFL-- 474
G ++ L+ P ++Y L+K ++ AG+ ++
Sbjct: 344 --------------GQGTEKAPLLLPR--TYPPDSRVYTTLMKGYMNAGRVDDVVAMARA 387
Query: 475 IKAEKENLQVSHDD-AALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAY 533
++ E E + S D V++ ++ G + +AH LLD+M AGV AS Y L+K Y
Sbjct: 388 MRREGETMPASKPDHVTYTTVMSTLVAAGDVGRAHALLDDMAGAGVPASRVTYNVLIKGY 447
Query: 534 ---IEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIP 590
++ ++ RE+ + A GI+ D Y L+ ++ D+ GAL LF EM+ +
Sbjct: 448 CQQLQMSKARELLQEMMSADGGGIEPDVVTYNTLMDGCVLADDSAGALALFNEMRSRGVA 507
Query: 591 RSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAE 650
S + L+K A + + ++ E+ WN ++ +C++ ++ A+
Sbjct: 508 PS-TASYTTLMKAFAAAGQPRAVQRVFDEMDRDPNAAPDRAAWNMLVEGYCQQGHLESAK 566
Query: 651 KALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEMKSFASSTSMNFDEELLDS 710
A ++M+ G P+ TF S+ G AA K E LWGE+K+ + + DEELLD+
Sbjct: 567 AATEKMKERGVQPDVATFGSLAKGVAA-ARKPGEALVLWGEVKARRDAGELRPDEELLDA 625
Query: 711 VLYTFVRGGFFARANEVVAMMEEGKMFIDKYKYRTLFLKYHKTLYKGK-TPKFQTEAQLK 769
+ VRG FF +A E+VA MEE + +K KY+ ++++ H ++ K + + + + +
Sbjct: 626 LADVCVRGAFFKKALEIVACMEENGIAPNKTKYKKIYIEMHSRMFTSKHASQARQDRRRE 685
Query: 770 KREAALGFKKWLGL 783
++ AA FK WLGL
Sbjct: 686 RKRAAEAFKFWLGL 699
>gi|224138602|ref|XP_002322855.1| predicted protein [Populus trichocarpa]
gi|222867485|gb|EEF04616.1| predicted protein [Populus trichocarpa]
Length = 751
Score = 158 bits (400), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 167/707 (23%), Positives = 313/707 (44%), Gaps = 80/707 (11%)
Query: 101 INEHRYGDAWKLYEQHMQMDGFPRKTLVNKILTSFVESLDSKWLEKAYGLVEQAFEEGKQ 160
+ + + +AW LY Q + P T ++++++ L +A ++ + E +
Sbjct: 83 LRQRKTEEAWVLYTQTPHL---PPPTCLSRLVSQLSYQNTPLSLRRAQSILTRLRHECQL 139
Query: 161 ILLEKEPLIYLSLGLSKCGLPVPASTILRKLVATEQYPPVTAWSAILAHMSLTAP--GAY 218
L+ L L++ +K G A +++ ++ + P V AWSA+L+ ++ +AP G
Sbjct: 140 HRLDANSLGLLAVSATKSGQLSYAFSLINSMLRSGYLPHVKAWSAVLSRLA-SAPDGGPT 198
Query: 219 LAAELILEIGYLFQDGRVDPRKKCNAPLIA-MKPNTNTFNIALAGCLLFETTRKAEQLLD 277
A +L I RV R+ + ++A +P+T FN L C + +L +
Sbjct: 199 RALKLFNTITR-----RV--RRFSDVTMVADSRPDTAAFNNVLNACANLGDGKMFLKLFE 251
Query: 278 IMPRIGVKADSNLLIIMAHIYERNGRREELR-KLQRHIDEAVNLSDIQFRQFYNCLLSCH 336
MP G++ D IM + R R++ L L+R I++ + L + L++ +
Sbjct: 252 EMPDFGLEPDILTYNIMIKLCARCNRKDLLVFVLERVIEKGIPLCMTTL----HSLVAAY 307
Query: 337 LKFGDLNSASKMVLEMLQRAKEARNSLAAAMLPFNAVGVNNRTPSEQNVNCTNSVDLENS 396
+ FGDL + +MV Q +E R L + + N + + E +
Sbjct: 308 VGFGDLETVERMV----QAMREGRRDLCKIL---------------REANLEDFNEDEEN 348
Query: 397 GIIENHILSYEDFTKDRKFVALEAEVKRVLQTLLGMLQKQVELITTEHGILQ----PTEK 452
++++ + F K +L VE+ +E +L P +
Sbjct: 349 EVLDSSQIGVSVFEK--------------------LLPNLVEVSNSEPPLLPKVFAPDSR 388
Query: 453 IYIKLVKAFLEAGKTKELTHFLIKAE-KENLQVSHDDAALGHVITLCISLGWLDQAHDLL 511
I+ L+K +++ G+ + L +++ + D VI+ + G +D A +L
Sbjct: 389 IFTTLMKGYMKQGRVTDTVRMLEAMRCQDDSKGQPDHITYTTVISALVKAGSMDPARQVL 448
Query: 512 DEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRD-ARSAGIQLDASCYEALLQSKIV 570
EM GV A+ Y LLK Y + + + LL++ A I+ D Y L+ I+
Sbjct: 449 AEMTRIGVPANRITYNILLKGYCQQLQIDKAKELLKEMADDVNIEPDVVSYNTLIDGCIL 508
Query: 571 QKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRIDCGV 630
D+ GAL F EM+ I + L+K A + + L K+ E+ + R+ +
Sbjct: 509 VDDSAGALAFFNEMRTKGI-MPTKISYTTLMKAFALSGQPKLANKVFDEMLKDPRVKADL 567
Query: 631 HDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWG 690
WN ++ +C+ L+ +A+ ++RM+ G P+ T+ S+ G + + K E LW
Sbjct: 568 VAWNMLLEGYCRLGLVDEAKTVIQRMKENGFHPDVATYGSLANGIS-LARKPGEALLLWK 626
Query: 691 EMK-------------SFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMF 737
E+K S + + DEELL ++ VR FF +A E+VA MEE +
Sbjct: 627 EVKERWEVKGEGESSNSDSPLLPLKPDEELLATLADICVRAAFFQKALEIVACMEENGIP 686
Query: 738 IDKYKYRTLFLKYHKTLYKGK-TPKFQTEAQLKKREAALGFKKWLGL 783
+K KY+ ++++ H ++ K + + + + +++ AA FK WLGL
Sbjct: 687 PNKTKYKKIYVEMHSRMFTSKHASQARQDRRRERKRAAEAFKFWLGL 733
>gi|242054089|ref|XP_002456190.1| hypothetical protein SORBIDRAFT_03g031900 [Sorghum bicolor]
gi|241928165|gb|EES01310.1| hypothetical protein SORBIDRAFT_03g031900 [Sorghum bicolor]
Length = 731
Score = 152 bits (385), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 137/544 (25%), Positives = 248/544 (45%), Gaps = 65/544 (11%)
Query: 251 PNTNTFNIALAGCLLFETTRKAEQLLDIMPRIGVKADSNLLIIMAHIYERNGRREEL-RK 309
P+ FN AL+ C R+ QL D M AD+ ++ + R GR++ + R
Sbjct: 221 PDAAAFNSALSACADAGDCRRFRQLFDAMSEWSAAADALTYNVVIKMCARAGRKDLVARV 280
Query: 310 LQRHIDEAVNLSDIQFRQFYNCLLSCHLKFGDLNSASKMVLEMLQRAKEARNSLAAAMLP 369
L+R + + F + L++ + FGD+ +A ++V M +E R + L
Sbjct: 281 LERMLSSGLAPCATTF----HSLVAAFVGFGDIATAERIVQAM----REERKDIC---LL 329
Query: 370 FNAVGVNNRTPSEQNVNCTNSVDL--ENSGIIENHILSYEDFTKDRKFVALEAEVKRVLQ 427
AV ++ C + D+ E + ++++ + E
Sbjct: 330 LRAVAMD----------CDGATDVVEEGAALLDDIVAGSEQE------------------ 361
Query: 428 TLLGMLQKQVELITTEHGILQPTEKIYIKLVKAFLEAGKTKELTHFL--IKAEKENLQVS 485
LG +V L+ + P ++Y L+K ++ AG+ ++ L ++ E S
Sbjct: 362 --LG--ADEVPLLPKAY---PPNARVYTTLMKGYMNAGRVDDVVAVLRAMRQEARTAPAS 414
Query: 486 HDD-AALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAY---IEANRPRE 541
D V++ + G + +AH +LDEM GV A+ Y LLK Y ++ + RE
Sbjct: 415 RPDHVTYTTVMSALVGAGDVARAHAVLDEMAADGVPANRVTYNVLLKGYCQQLQIGKARE 474
Query: 542 V-TALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEML 600
+ ++ DA GIQ Y L+ ++ D+ GAL F EM+ I S + L
Sbjct: 475 LFEEMVTDA---GIQPGVVTYNTLMDGCVLSDDSAGALAFFNEMRSRGIAPS-TVSYTTL 530
Query: 601 VKGCAQNHEAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLG 660
+K A + + + K+ +E++ R+ WN ++ +C+ ++ A++ ++RM+ G
Sbjct: 531 MKAFAVSGQPKVAHKVFEEMERDPRVTVDRAAWNMLVEGYCRLGQVETAKQVVERMKERG 590
Query: 661 HLPNAQTFHSMVTGYAAIGGKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGF 720
P+ T+ S+ G A + K E LW E+K + DEELL ++ VR F
Sbjct: 591 VQPDVATYGSLAKGVA-MARKPGEALVLWNEVKERCLEEA---DEELLGALADVCVRAAF 646
Query: 721 FARANEVVAMMEEGKMFIDKYKYRTLFLKYHKTLYKGK-TPKFQTEAQLKKREAALGFKK 779
F +A E+VA MEE + +K KY+ ++++ H ++ K + + + + +++ AA FK
Sbjct: 647 FKKALEIVACMEEKGIAPNKTKYKKMYIEMHSRMFTSKHASQARQDRRRERKRAAEAFKF 706
Query: 780 WLGL 783
WLGL
Sbjct: 707 WLGL 710
>gi|222616460|gb|EEE52592.1| hypothetical protein OsJ_34898 [Oryza sativa Japonica Group]
Length = 675
Score = 146 bits (369), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 110/394 (27%), Positives = 199/394 (50%), Gaps = 32/394 (8%)
Query: 397 GIIENHILSYEDFTKDRKFVALEAEVKRVLQTLLGMLQKQVELITTEHGILQPTEKIYIK 456
+ ++HI+S+ D++ LE VK Q + +L K P ++Y
Sbjct: 290 AVADDHIISH-----DQQSCVLEDIVKPWEQEEVPLLPKAYP----------PNSRVYTT 334
Query: 457 LVKAFLEAGKTKELTHFL--IKAEKENLQVSHDD-AALGHVITLCISLGWLDQAHDLLDE 513
L+K ++ AG+ +++ L ++ E E S D VI+ ++ G +++A +L+E
Sbjct: 335 LMKGYMNAGRVEDVVAMLRAMRREGETSPASRPDHVTYTTVISTLVAAGDMERARAVLEE 394
Query: 514 MHLAGVRASSSVYASLLKAY---IEANRPREVTALLRDARSAGIQLDASCYEALLQSKIV 570
M AGV AS Y L+K Y ++A + +E+ A+ D AGIQ D Y L+ ++
Sbjct: 395 MGQAGVAASRVTYNVLIKGYCQQLQAGKAKELLAV--DMAEAGIQPDVVTYNTLIDGCVL 452
Query: 571 QKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRIDCGV 630
D+ GA+ LF EM+E I S + L+K A + + L K+ E+++ R+
Sbjct: 453 TDDSAGAVALFNEMRERGIAPSA-VSYTTLMKAFAASGQPKLAHKVFDEMEKDPRVAVDR 511
Query: 631 HDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWG 690
WN ++ +C+ L++ A+K ++RM++ G P+ T+ S+ G A+ + E LW
Sbjct: 512 AAWNMLVEAYCRLGLLESAKKVVERMKARGVQPDVATYGSLAKGI-AVARRPGEALLLWE 570
Query: 691 EMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFIDKYKYRTLFLKY 750
E+K D E+++++ VR F +A E+VA MEE + +K KY+ +++
Sbjct: 571 EIK------EKEVDGEVVEALADVCVRAALFRKALEMVARMEEMGVEPNKAKYKRMYVDL 624
Query: 751 HKTLYKGK-TPKFQTEAQLKKREAALGFKKWLGL 783
H ++ K + + + + +++ AA FK WLGL
Sbjct: 625 HSRMFTSKHASQARQDRRRERKRAAEAFKFWLGL 658
>gi|302768505|ref|XP_002967672.1| hypothetical protein SELMODRAFT_88400 [Selaginella moellendorffii]
gi|300164410|gb|EFJ31019.1| hypothetical protein SELMODRAFT_88400 [Selaginella moellendorffii]
Length = 717
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 157/705 (22%), Positives = 296/705 (41%), Gaps = 100/705 (14%)
Query: 100 AINEHRYGDAWKLYEQHMQMDG-FPRKTLVNKILTSFVESLDSKWLEKAYGLVEQAFEEG 158
A+ + + AW +E + G P + V++++ + + KA ++ + ++
Sbjct: 79 ALKQWKTQVAWTKFETMTKKLGVLPDRVCVSRLVAQLCHQGTAASVSKAQQIMVELRQKR 138
Query: 159 K-QILLEKEPLIYLSLGLSKCGLPVPASTILRKLVATEQYPPVTAWSAILAHMSLTAPGA 217
K L++ + + L + ++ G + +LR ++ +PPV WSA+++ + A
Sbjct: 139 KVSELVDCDAMGLLVMASARVGTAHYSLGVLRTMLELGYHPPVKVWSAVVSKLGKNVDDA 198
Query: 218 YLAAELILEIGY-LFQDGRVDPRKKCNAPLIAMKPNTNTFNIALAGCLLFETTRKAEQLL 276
LA ++ E+ + + G + +K + MKP+T FN AL C +AEQL
Sbjct: 199 QLALKVFDEVCQCVVEQGMIQLHRK----MERMKPDTGAFNAALNACANIGNLERAEQLW 254
Query: 277 DIMPRIGVKADSNLLIIMAHIYERNGRREELRKLQRHIDEAVNLSDIQFRQFYNCLLSCH 336
++MP GVKA++ +M +Y R E+L KL++ + + +N L++
Sbjct: 255 ELMPAFGVKANTLTFNVMIKLY---ARVEKLDKLEQILHTMADADVDPDATTFNSLVAAF 311
Query: 337 LKFGDLNSASKMVLEMLQRAKEARNSLAAAMLPFNAVGVNNRTPSEQNVNCTNSVDLENS 396
+ G+L+ A +V + R + A+LP E+S
Sbjct: 312 VGLGELSLAESIVQSL--RGEGEHQKRVPALLPKLR---------------------EHS 348
Query: 397 GIIENHILSYEDFTKDRKFVALEAEVKRVLQTLLGMLQKQVELITTEHGILQPTEKIYIK 456
+ + +Y K V +Q L+ M Q++ P E +
Sbjct: 349 AKFQPDVRTYTTLMKG---YVQHNRVSDAMQLLVAMQQEKT-------SAAMPNEVTFTT 398
Query: 457 LVKAFLEAGKTKELTHFL--IKAEKENLQVSHDDAALGHVITLCISLGWLDQAHDLLDEM 514
++A + G E L + +K V + L V I+ + +A +++++M
Sbjct: 399 AIRACAKMGLLDEARVILQEMATQKVAANVVTYNTLLQGVCVFPITD--MKRALEIVEDM 456
Query: 515 HLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQKDT 574
AGV Y +L+ Y+EA D
Sbjct: 457 KEAGVELDVVSYNTLINGYLEAG-----------------------------------DN 481
Query: 575 PGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRIDCGVHDWN 634
AL +F M+E+K+P S + L+K A++ L+ K+ ++ R+ V WN
Sbjct: 482 EQALAVFTRMREAKVPAS-KVTYGTLMKAFARSGRTELVVKVFTQMALDPRVRVDVVAWN 540
Query: 635 NVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEMKS 694
+I + + L QDA +AL+ M+S G P T++++V Y + ++ LW E+ +
Sbjct: 541 TLIDAYARAGLEQDATRALEDMKSRGFSPTNATYNTLVKTYGR-SRNFGQLILLWKEINA 599
Query: 695 FASST-------------SMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFID-- 739
+ ++ D LLDS++ +FVRGG+F A +VV M+ +
Sbjct: 600 RSVEEDSAAVRDKPLVVGALKPDAALLDSLIDSFVRGGYFQLALQVVDCMDRQGIHSGRA 659
Query: 740 KYKYRTLFLKYHKTLYKGK-TPKFQTEAQLKKREAALGFKKWLGL 783
K KY+ L+++ + LY + T + + ++R A FK W+GL
Sbjct: 660 KAKYKRLYVELYANLYTSRHTSERRKSKTAERRRAVEAFKFWVGL 704
>gi|414880874|tpg|DAA58005.1| TPA: hypothetical protein ZEAMMB73_979671 [Zea mays]
Length = 730
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 131/520 (25%), Positives = 236/520 (45%), Gaps = 56/520 (10%)
Query: 270 RKAEQLLDIMPRIGVKADSNLLIIMAHIYERNGRREEL-RKLQRHIDEAVNLSDIQFRQF 328
R+ QL D M AD+ ++ + R GR++ + R L+R + + F
Sbjct: 240 RRFRQLFDAMSEWSAAADALTYNVVIKMCARAGRKDLVARVLERMLFSGLTPCATTF--- 296
Query: 329 YNCLLSCHLKFGDLNSASKMVLEMLQRAKEARNSLAAAMLPFNAVGVNNRTPSEQNVNCT 388
+ L++ + FGD+ +A ++V M +E R + L AV +++C
Sbjct: 297 -HSLVAAFVGFGDIATAERIVQAM----REERKDIC---LLLRAV----------SMDCD 338
Query: 389 NSVDLENSGIIENHILSYEDFTKDRKFVALEAEVKRVLQTLLGMLQKQVELITTEHGILQ 448
D+E ++ + I+ A K+ G +V L+ +
Sbjct: 339 GVTDVEEGAVLLDDIV---------------AGAKQ------GQGSDEVPLLPKAY---P 374
Query: 449 PTEKIYIKLVKAFLEAGKTKELTHFL--IKAEKENLQVSHDD-AALGHVITLCISLGWLD 505
P ++Y L+K + AG+ ++ L ++ E + S D VI+ + G +
Sbjct: 375 PNARVYTTLMKGYTNAGRVDDVLAVLRAMRQEAQTAPASRPDHVTYTTVISALVGAGDMA 434
Query: 506 QAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRD-ARSAGIQLDASCYEAL 564
+A +L+EM A V A+ Y LLK Y + + + L + AGIQ Y L
Sbjct: 435 RARAVLNEMAAARVPANRVTYNVLLKGYCQQLQIGQARELFEEMVTDAGIQPGVVTYNTL 494
Query: 565 LQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQ 624
+ ++ D+ GAL F EM+ I S + L+K A + + + K+ +E++
Sbjct: 495 MDGCVLTDDSAGALAFFNEMRSRGIAPS-TVSYTTLMKAFAVSGQPKVAHKVFEEMERDP 553
Query: 625 RIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTE 684
R+ WN ++ +C+ L++ A++ ++RM+ G P+ T+ SM G A + K E
Sbjct: 554 RVTVDRAAWNMLVEGYCRLGLVETAKQVVERMKERGVQPDVATYGSMAKGIA-VARKPGE 612
Query: 685 VTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFIDKYKYR 744
LW E+K + DEELL ++ VR FF +A E+VA MEE + +K KY+
Sbjct: 613 ALVLWNEVKERCLKEA---DEELLGALADVCVRAAFFKKALEIVACMEEKGIAPNKTKYK 669
Query: 745 TLFLKYHKTLYKGK-TPKFQTEAQLKKREAALGFKKWLGL 783
++++ H ++ K + + + + +++ AA FK WLGL
Sbjct: 670 KMYIEMHSRMFTSKHASQARQDRRRERKRAAEAFKFWLGL 709
>gi|302761110|ref|XP_002963977.1| hypothetical protein SELMODRAFT_82002 [Selaginella moellendorffii]
gi|300167706|gb|EFJ34310.1| hypothetical protein SELMODRAFT_82002 [Selaginella moellendorffii]
Length = 716
Score = 141 bits (356), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 157/705 (22%), Positives = 295/705 (41%), Gaps = 100/705 (14%)
Query: 100 AINEHRYGDAWKLYEQHMQMDG-FPRKTLVNKILTSFVESLDSKWLEKAYGLVEQAFEEG 158
A+ + + AW +E + G P + V++++ + + KA ++ + ++
Sbjct: 78 ALKQWKTQVAWTKFETMTKKLGVLPDRVCVSRLVAQLCHQGTAASVSKAQQIMVELRQKR 137
Query: 159 K-QILLEKEPLIYLSLGLSKCGLPVPASTILRKLVATEQYPPVTAWSAILAHMSLTAPGA 217
K L++ + + L + ++ G + +LR ++ +PPV WSA+++ + A
Sbjct: 138 KVSELVDCDAMGLLVMASARVGTAHYSLGVLRTMLELGYHPPVKVWSALVSKLGKNVDDA 197
Query: 218 YLAAELILEIGY-LFQDGRVDPRKKCNAPLIAMKPNTNTFNIALAGCLLFETTRKAEQLL 276
LA ++ E+ + + G + +K + MKP+T FN AL C +AEQL
Sbjct: 198 QLALKVFDEVCQCVAEQGMIQLHRK----MERMKPDTGAFNAALNACANIGNLERAEQLW 253
Query: 277 DIMPRIGVKADSNLLIIMAHIYERNGRREELRKLQRHIDEAVNLSDIQFRQFYNCLLSCH 336
++MP GVKA++ +M +Y R E+L KL++ + + +N L++
Sbjct: 254 ELMPAFGVKANTLTFNVMIKLY---ARVEKLDKLEQILHTMADADVDPDATTFNSLVAAF 310
Query: 337 LKFGDLNSASKMVLEMLQRAKEARNSLAAAMLPFNAVGVNNRTPSEQNVNCTNSVDLENS 396
+ G+L+ A +V + R + + A+LP E+S
Sbjct: 311 VGLGELSLAESIVQSL--RGEGEHQTRVPALLPKLR---------------------EHS 347
Query: 397 GIIENHILSYEDFTKDRKFVALEAEVKRVLQTLLGMLQKQVELITTEHGILQPTEKIYIK 456
+ + +Y K V +Q L+ M Q++ P E +
Sbjct: 348 AKFQPDVRTYTTLMKG---YVQHNRVSDAMQLLVAMQQEKT-------SAAMPNEVTFTT 397
Query: 457 LVKAFLEAGKTKELTHFL--IKAEKENLQVSHDDAALGHVITLCISLGWLDQAHDLLDEM 514
++A + G E L + +K V + L V I+ + +A +++++M
Sbjct: 398 AIRACAKMGLLDEARVILQEMATQKVAANVVTYNTLLQGVCVFPITD--MKRALEIVEDM 455
Query: 515 HLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQKDT 574
AGV Y +L+ Y+EA D
Sbjct: 456 KEAGVELDVVSYNTLINGYLEAG-----------------------------------DN 480
Query: 575 PGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRIDCGVHDWN 634
AL F M+E+K+P S + L+K A++ L+ K+ ++ R+ V WN
Sbjct: 481 EQALAAFTRMREAKVPAS-KVTYGTLMKAFARSGRTELVVKVFTQMALDPRVRVDVVAWN 539
Query: 635 NVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEMKS 694
+I + + L QDA +AL+ M+S G P T++++V Y + + LW E+ +
Sbjct: 540 TLIDAYARAGLEQDATRALEDMKSRGFSPTNATYNTLVKTYGR-SRNFGLLILLWKEINA 598
Query: 695 FASST-------------SMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFID-- 739
+ ++ D LLDS++ +FVRGG+F A +VV M+ +
Sbjct: 599 RSVEEDSAAVRDKPLVVGALKPDAALLDSLIDSFVRGGYFQLALQVVDCMDRQGIHSGRA 658
Query: 740 KYKYRTLFLKYHKTLYKGK-TPKFQTEAQLKKREAALGFKKWLGL 783
K KY+ L+++ + LY + T + + ++R A FK W+GL
Sbjct: 659 KAKYKRLYVELYANLYTSRHTSERRKSKTAERRRAVEAFKFWVGL 703
>gi|302797571|ref|XP_002980546.1| hypothetical protein SELMODRAFT_113055 [Selaginella moellendorffii]
gi|300151552|gb|EFJ18197.1| hypothetical protein SELMODRAFT_113055 [Selaginella moellendorffii]
Length = 636
Score = 138 bits (348), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 165/701 (23%), Positives = 297/701 (42%), Gaps = 120/701 (17%)
Query: 93 LSAEIENAINEHRYGDAWKLYEQHMQMDGFPRKTLVNKILTSFVESLDSKWLEKAYGLVE 152
++ + A+ E R DA + + FP + ++ +++ L +A L++
Sbjct: 1 MTIAFDRALLERRTEDAVFAVDGLRRKGSFPSRDSLSTLISQLAYKQTPLSLSQADRLIQ 60
Query: 153 QAFEEGKQILLEKEPLIYLSLGLSKCGLPVPASTILRKLVATEQYPPVTAWSAILAHMSL 212
++ LL++ L L+L + G+ + + LR + T YPPV W+A++
Sbjct: 61 DLVASRREDLLDQNSLSLLALAYAGVGMANFSRSTLRLMFQTGLYPPVRVWTAVMVEEP- 119
Query: 213 TAPGAYLAAELILEIGYLFQDGRVDPRKKCNAPLIAMKPNTNTFNIALAGCLLFETTRKA 272
P A + D + P K L++M+P+ +FN AL C T+ A
Sbjct: 120 -DPVARIIK---------LMDFAMMP-KGNEELLVSMRPDVTSFNSALRICATLADTQNA 168
Query: 273 EQLLDIMPRIGVKADSNLLIIMAHIYERNGRREELRKLQRHIDEA-VNLSDIQFRQFYNC 331
E++ M GV +S+ ++ +Y + R + RK+ + ++ A V S +
Sbjct: 169 EEIFHSMSLFGVLPNSDSFELLIKVYGKARRFDLFRKVPQRMEAACVRPSASTLK----A 224
Query: 332 LLSCHLKFGDLNSASKMVLEMLQRAKEARNSLAAAMLPFNAVGVNNRTPSEQNVNCTNSV 391
L+ +++ G++ A K +LQ+ + ++SL N V
Sbjct: 225 LIDAYVESGNIEEAEK----VLQKTVQGKSSL------------------------WNLV 256
Query: 392 DLENSGIIENHILSYEDFTKDRKFVALEAEVKRVLQTLLGMLQKQVELITTEHGILQPTE 451
LE G + N +L K ALEA + L V L G+ Q
Sbjct: 257 KLE--GDVYNSLL---------KAYALEARLSDAANLL-----SSVPLEDAGTGLDQA-- 298
Query: 452 KIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDD-AALGHVITLCISLGWLDQAHDL 510
++V + + +G KE+ L + ++VS +L H C + LD+A
Sbjct: 299 ----RVVASMIASGMLKEICSILQYMLQHRMEVSFSAYKSLMH--GFCAN-NQLDKAASF 351
Query: 511 LDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIV 570
+ M AG++ S+Y L++ + C + LL
Sbjct: 352 IILMKRAGIKPDCSIYGPLIQGLVR------------------------CRDRLL----- 382
Query: 571 QKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRIDCGV 630
A H F EM E++I + L+K A M ++L+ V E + +
Sbjct: 383 ------AYHTFLEMVEARIV-PDEATYVSLLKALTVEERASKMVRVLEAVMEFPSVKISL 435
Query: 631 HDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWG 690
WN VI + KK+L+ DA++ L RM G P++ ++ +V G + T+V LW
Sbjct: 436 FSWNLVIEYCSKKKLIGDAQRMLARMAPAGVQPDSYSYWYVVKGLIT-RSRLTDVLGLWP 494
Query: 691 EMKSFAS----STSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFIDKYKYRTL 746
+++ FAS + ++L+++++Y FV+G FA+A E++ +E + +D+ ++ L
Sbjct: 495 QIQ-FASRRDRPNRIILHKQLVETLMYAFVKGANFAQALELLEYAKEEDIPLDREAFKDL 553
Query: 747 FLKYHKTLY--KGKTP--KFQTEAQLKKREAALGFKKWLGL 783
FLKYH + K K+P + + QL + E FKKWL L
Sbjct: 554 FLKYHSHRFTSKHKSPLRVYGRQQQLLEMEE---FKKWLSL 591
>gi|302790097|ref|XP_002976816.1| hypothetical protein SELMODRAFT_105853 [Selaginella moellendorffii]
gi|300155294|gb|EFJ21926.1| hypothetical protein SELMODRAFT_105853 [Selaginella moellendorffii]
Length = 636
Score = 134 bits (337), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 164/701 (23%), Positives = 296/701 (42%), Gaps = 120/701 (17%)
Query: 93 LSAEIENAINEHRYGDAWKLYEQHMQMDGFPRKTLVNKILTSFVESLDSKWLEKAYGLVE 152
++ + A+ E R DA + + FP + ++ +++ L +A L++
Sbjct: 1 MTIAFDRALLERRTEDAVFAVDGLRRKGSFPSRDSLSTLISQLAYKQTPLSLSQADRLIQ 60
Query: 153 QAFEEGKQILLEKEPLIYLSLGLSKCGLPVPASTILRKLVATEQYPPVTAWSAILAHMSL 212
++ LL++ L L+L + G+ + + LR + T YP V W+A++
Sbjct: 61 DLVASRREDLLDQNSLSLLALAYAGVGMANFSRSTLRLMFQTGLYPSVRVWTAVMVEEP- 119
Query: 213 TAPGAYLAAELILEIGYLFQDGRVDPRKKCNAPLIAMKPNTNTFNIALAGCLLFETTRKA 272
P A + D + P K L++M+P+ +FN AL C T+ A
Sbjct: 120 -DPVARIIK---------LMDFAMMP-KGNEELLVSMRPDVTSFNSALRICATLADTQNA 168
Query: 273 EQLLDIMPRIGVKADSNLLIIMAHIYERNGRREELRKLQRHIDEA-VNLSDIQFRQFYNC 331
E++ M GV +S+ ++ +Y + R + RK+ + ++ A V S +
Sbjct: 169 EEIFHSMSLFGVLPNSDSFELLIKVYGKARRFDLFRKVPQRMEAACVRPSASTLK----A 224
Query: 332 LLSCHLKFGDLNSASKMVLEMLQRAKEARNSLAAAMLPFNAVGVNNRTPSEQNVNCTNSV 391
L+ +++ G++ A K +LQ+ + ++SL N V
Sbjct: 225 LVDAYVESGNIEEAEK----VLQKTVQGKSSL------------------------WNLV 256
Query: 392 DLENSGIIENHILSYEDFTKDRKFVALEAEVKRVLQTLLGMLQKQVELITTEHGILQPTE 451
LE G + N +L K ALEA + L V L G+ Q
Sbjct: 257 KLE--GDVYNSLL---------KAYALEARLSDAANLL-----SSVPLEDAGTGLDQA-- 298
Query: 452 KIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDD-AALGHVITLCISLGWLDQAHDL 510
++V + + +G KE+ L + ++VS +L H C + LD+A
Sbjct: 299 ----RVVASMIASGMLKEICSILQYMLQHRMEVSFSAYKSLMH--GFCAN-NQLDKAASF 351
Query: 511 LDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIV 570
+ M AG++ S+Y L++ + C + LL
Sbjct: 352 IILMKRAGIKPDCSIYGPLIQGLVR------------------------CRDRLL----- 382
Query: 571 QKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRIDCGV 630
A H F EM E++I + L+K A M ++L+ V E + +
Sbjct: 383 ------AYHTFLEMVEARIV-PDEATYVSLLKALTVEERASKMVRVLEAVMEFPSVKISL 435
Query: 631 HDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWG 690
WN VI + KK+L+ DA++ L RM G P++ ++ +V G + T+V LW
Sbjct: 436 FSWNLVIEYCSKKKLIGDAQRMLARMAPAGVQPDSYSYWYVVKGLIT-RSRLTDVLGLWP 494
Query: 691 EMKSFAS----STSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFIDKYKYRTL 746
+++ FAS + ++L+++++Y FV+G FA+A E++ +E + +D+ ++ L
Sbjct: 495 QIQ-FASRRDRPNRIILHKQLVETLMYAFVKGANFAQALELLEYAKEEDIPLDREAFKDL 553
Query: 747 FLKYHKTLY--KGKTP--KFQTEAQLKKREAALGFKKWLGL 783
FLKYH + K K+P + + QL + E FKKWL L
Sbjct: 554 FLKYHSHRFTSKHKSPLRVYGRQQQLLEMEE---FKKWLSL 591
>gi|242077462|ref|XP_002448667.1| hypothetical protein SORBIDRAFT_06g031150 [Sorghum bicolor]
gi|241939850|gb|EES12995.1| hypothetical protein SORBIDRAFT_06g031150 [Sorghum bicolor]
Length = 257
Score = 133 bits (335), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 85/284 (29%), Positives = 147/284 (51%), Gaps = 29/284 (10%)
Query: 501 LGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASC 560
+GWL AHD++D++ AG+ + Y SLL+AY + N+ E LL+ + +D
Sbjct: 1 MGWLHSAHDIIDDLESAGIPVGITGYISLLRAYEKENKSEEFNCLLQQIQKIASTMDD-- 58
Query: 561 YEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEV 620
+ ++P + ++ + +IP S + L A L E+
Sbjct: 59 ---------IHTNSPFTIKNIAKVVKYEIPLSS----------------SSLFAALADEI 93
Query: 621 KEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGG 680
K + + ++NN + FFCK ++M+DA KRMR P + TF ++ GY+++
Sbjct: 94 KHYKPEEHLTLEFNNSVLFFCKAKMMEDALCTYKRMREQNIRPTSHTFCHILRGYSSMD- 152
Query: 681 KYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFIDK 740
+ E+T LWGE+K ++ D +LLD ++ F++GG+F+R E+++ M + ++ DK
Sbjct: 153 MHREITMLWGEIKRRLEYGELDLDRDLLDCLVLNFLKGGYFSRVMEIISYMSKHNIYCDK 212
Query: 741 YKYRTLFLKYHKTLYKG-KTPKFQTEAQLKKREAALGFKKWLGL 783
+KYR FLK HK LY+ + +TEAQ K+ E F+ W +
Sbjct: 213 WKYRHAFLKLHKNLYRNLNSLHDKTEAQSKRIEDVRAFRLWASI 256
>gi|297739403|emb|CBI29512.3| unnamed protein product [Vitis vinifera]
Length = 883
Score = 123 bits (309), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 92/279 (32%), Positives = 142/279 (50%), Gaps = 36/279 (12%)
Query: 283 GVKADSNLLIIMAHIYERNGRREELRKLQRHIDEAVNLSDIQFRQFYNCLLSCHLKFGDL 342
GV AD++ ++I+A I+E NG+R +L+K + HID+ +R+FY+ LLS H F D+
Sbjct: 6 GVGADAHSIVIIAQIHEINGQRLDLKKFKCHIDQVSIQLLRHYRKFYDSLLSLHFTFNDI 65
Query: 343 NSASKMVLEMLQRAKEARNSLAAAMLPFNAVGVNNRTPSEQNVNCTNSVDLENSGIIENH 402
+ A+ +VL+M + R+SL+ + +E C G I ++
Sbjct: 66 DDAAGLVLDMCR----CRDSLSI-----------RKDRNESYKTCL--------GPIGSY 102
Query: 403 ILSYEDFTKDRKFVALEAEVKRVLQ--TLLGMLQKQVELITTEHGILQPTEKIYIKLVKA 460
L R+ + ++ V +LQ ++ M KQ EL+ +G + K +KLV A
Sbjct: 103 HL--------REGLKIQI-VPELLQKDSVFKMDSKQ-ELVLFSNGKYVLSNKALVKLVIA 152
Query: 461 FLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQAHDLLDEMHLAGVR 520
+ G+ EL+ ++ +KE L + VI CI LGWL+ AH +LD+M LAG
Sbjct: 153 YQGDGRIGELSRLMLSLQKE-LGTLEGGGLISDVIDACIQLGWLETAHGILDDMELAGAP 211
Query: 521 ASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDAS 559
SS Y SLL AY + RE ALL+ R AG +D S
Sbjct: 212 IGSSTYMSLLTAYYKGKMAREAKALLKQMRKAGFVVDLS 250
>gi|413919768|gb|AFW59700.1| hypothetical protein ZEAMMB73_261613 [Zea mays]
Length = 216
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 55/148 (37%), Positives = 85/148 (57%), Gaps = 2/148 (1%)
Query: 634 NNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEMK 693
NN + FFCK ++M+D K MR P + TF M+ GY+++ + EVT LWGE+K
Sbjct: 66 NNSVLFFCKAKMMEDVVCTCKCMREQNIRPTSHTFCHMLCGYSSMD-MHREVTMLWGEIK 124
Query: 694 SFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFIDKYKYRTLFLKYHKT 753
++ +LLDS++ F++GG+F R E+++ M + ++ DK+KY FLK HK
Sbjct: 125 RRHEYGELDLFRDLLDSLVLNFLKGGYFPRVMEIISYMSKHNIYCDKWKYGCAFLKLHKN 184
Query: 754 LYKG-KTPKFQTEAQLKKREAALGFKKW 780
LY + +TEAQ K+ E F+ W
Sbjct: 185 LYMNLNSLHDKTEAQSKRIEDVRAFRLW 212
>gi|449530367|ref|XP_004172167.1| PREDICTED: pentatricopeptide repeat-containing protein At5g04810,
chloroplastic-like, partial [Cucumis sativus]
Length = 564
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 105/415 (25%), Positives = 182/415 (43%), Gaps = 45/415 (10%)
Query: 271 KAEQLLDIMPRIGVKADSNLLIIMAHIYERNGRREE-LRKLQRHIDEAVNLSDIQFRQFY 329
KAE L+ M G+ A ++ M Y G ++ L +R + +N S I Y
Sbjct: 36 KAEALVREMEEEGIDAPIDIYHTMMDGYTMVGDEDKCLLVFERFKECGLNPSVIT----Y 91
Query: 330 NCLLSCHLKFGDLNSASKMVLEMLQRAKEARNSLAAAMLPFNAVGVNNRTPSEQNVNCTN 389
CL++ + K G ++ A ++ EM + A N +ML + +
Sbjct: 92 GCLINLYAKLGKVSKALEVSKEM-EHAGIKHNMKTYSMLINGFLKLK------------- 137
Query: 390 SVDLENSGIIENHILSYEDFTKDRKFVALEAEV---KRVLQTLLGMLQKQVELITTEHGI 446
D N+ I +ED KD ++ +V ++ GM + + T +
Sbjct: 138 --DWANAFAI------FEDLIKD----GIKPDVVLYNNIITAFCGMGKMDRAVCTVKEMQ 185
Query: 447 LQ---PTEKIYIKLVKAFLEAGKTKE-LTHFLIKAEKENLQVSHDDAALGHVITLCISLG 502
Q PT + ++ ++ F G+ K+ L F + + H AL I +
Sbjct: 186 KQRHKPTTRTFMPIIHGFARKGEMKKALDVFDMMRMSGCIPTVHTYNAL---ILGLVEKR 242
Query: 503 WLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYE 562
+++A +LDEM LAGV + Y +++ Y + A R G+QLD YE
Sbjct: 243 KMEKAEQILDEMTLAGVSPNEHTYTTIMHGYASLGDTGKAFAYFTKLRDEGLQLDVYTYE 302
Query: 563 ALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVK- 621
ALL++ AL + KEM IPR+ + +L+ G A+ + A L+Q++K
Sbjct: 303 ALLKACCKSGRMQSALAVTKEMSAQNIPRNTFI-YNILIDGWARRGDVWEAADLMQQMKR 361
Query: 622 EGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYA 676
EG + D +H + + I+ K MQ A K ++ M+S+G PN +T+ +++ G+A
Sbjct: 362 EGVQPD--IHTYTSFINACSKAGDMQRATKTIEEMKSVGVKPNVKTYTTLINGWA 414
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 57/239 (23%), Positives = 105/239 (43%), Gaps = 9/239 (3%)
Query: 443 EHGILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLG 502
E GI P + IY ++ + G + L+ + ++ G +I L LG
Sbjct: 46 EEGIDAPID-IYHTMMDGYTMVGDEDKC--LLVFERFKECGLNPSVITYGCLINLYAKLG 102
Query: 503 WLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYE 562
+ +A ++ EM AG++ + Y+ L+ +++ A+ D GI+ D Y
Sbjct: 103 KVSKALEVSKEMEHAGIKHNMKTYSMLINGFLKLKDWANAFAIFEDLIKDGIKPDVVLYN 162
Query: 563 ALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKE 622
++ + A+ KEM++ + + + F ++ G A+ E M K L
Sbjct: 163 NIITAFCGMGKMDRAVCTVKEMQKQR-HKPTTRTFMPIIHGFARKGE---MKKALDVFDM 218
Query: 623 GQRIDC--GVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIG 679
+ C VH +N +I +KR M+ AE+ L M G PN T+ +++ GYA++G
Sbjct: 219 MRMSGCIPTVHTYNALILGLVEKRKMEKAEQILDEMTLAGVSPNEHTYTTIMHGYASLG 277
Score = 45.1 bits (105), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 30/143 (20%), Positives = 63/143 (44%), Gaps = 8/143 (5%)
Query: 453 IYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQAHDLLD 512
IY L+ + G E + + ++E +Q D I C G + +A ++
Sbjct: 335 IYNILIDGWARRGDVWEAADLMQQMKREGVQ--PDIHTYTSFINACSKAGDMQRATKTIE 392
Query: 513 EMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQK 572
EM GV+ + Y +L+ + A+ P + + + + +G++ D + Y L+ S + +
Sbjct: 393 EMKSVGVKPNVKTYTTLINGWARASLPEKALSCFEEMKLSGLKPDRAVYHCLMTSLLSRA 452
Query: 573 DT------PGALHLFKEMKESKI 589
PG L + +EM + ++
Sbjct: 453 TVAHGCIYPGILSVCREMVDCEL 475
>gi|449435168|ref|XP_004135367.1| PREDICTED: pentatricopeptide repeat-containing protein At5g04810,
chloroplastic-like [Cucumis sativus]
Length = 962
Score = 92.4 bits (228), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 104/415 (25%), Positives = 181/415 (43%), Gaps = 45/415 (10%)
Query: 271 KAEQLLDIMPRIGVKADSNLLIIMAHIYERNGRREE-LRKLQRHIDEAVNLSDIQFRQFY 329
KAE L+ M G+ A ++ M Y G ++ L +R + +N S I Y
Sbjct: 434 KAEALVREMEEEGIDAPIDIYHTMMDGYTMVGDEDKCLLVFERFKECGLNPSVIT----Y 489
Query: 330 NCLLSCHLKFGDLNSASKMVLEMLQRAKEARNSLAAAMLPFNAVGVNNRTPSEQNVNCTN 389
CL++ + K G ++ A ++ EM + A N +ML + +
Sbjct: 490 GCLINLYAKLGKVSKALEVSKEM-EHAGIKHNMKTYSMLINGFLKLK------------- 535
Query: 390 SVDLENSGIIENHILSYEDFTKDRKFVALEAEV---KRVLQTLLGMLQKQVELITTEHGI 446
D N+ I +ED KD ++ +V ++ GM + + T +
Sbjct: 536 --DWANAFAI------FEDLIKD----GIKPDVVLYNNIITAFCGMGKMDRAVCTVKEMQ 583
Query: 447 LQ---PTEKIYIKLVKAFLEAGKTKE-LTHFLIKAEKENLQVSHDDAALGHVITLCISLG 502
Q PT + ++ ++ F G+ K+ L F + + H AL I +
Sbjct: 584 KQRHKPTTRTFMPIIHGFARKGEMKKALDVFDMMRMSGCIPTVHTYNAL---ILGLVEKR 640
Query: 503 WLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYE 562
+++A +LDEM LAGV + Y +++ Y + R G+QLD YE
Sbjct: 641 KMEKAEQILDEMTLAGVSPNEHTYTTIMHGYASLGDTGKAFTYFTKLRDEGLQLDVYTYE 700
Query: 563 ALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVK- 621
ALL++ AL + KEM IPR+ + +L+ G A+ + A L+Q++K
Sbjct: 701 ALLKACCKSGRMQSALAVTKEMSAQNIPRNTFI-YNILIDGWARRGDIWEAADLMQQMKR 759
Query: 622 EGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYA 676
EG + D +H + + I+ K MQ A K ++ M+S+G PN +T+ +++ G+A
Sbjct: 760 EGVQPD--IHTYTSFINACSKAGDMQRATKTIEEMKSVGVKPNVKTYTTLINGWA 812
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 96/205 (46%), Gaps = 9/205 (4%)
Query: 492 GHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARS 551
G +I L LG + +A ++ EM AG++ + Y+ L+ +++ A+ D
Sbjct: 490 GCLINLYAKLGKVSKALEVSKEMEHAGIKHNMKTYSMLINGFLKLKDWANAFAIFEDLIK 549
Query: 552 AGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAG 611
GI+ D Y ++ + A+ KEM++ + + + F ++ G A+ G
Sbjct: 550 DGIKPDVVLYNNIITAFCGMGKMDRAVCTVKEMQKQR-HKPTTRTFMPIIHGFARK---G 605
Query: 612 LMAKLLQEVKEGQRIDC--GVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFH 669
M K L + C VH +N +I +KR M+ AE+ L M G PN T+
Sbjct: 606 EMKKALDVFDMMRMSGCIPTVHTYNALILGLVEKRKMEKAEQILDEMTLAGVSPNEHTYT 665
Query: 670 SMVTGYAAIG--GK-YTEVTELWGE 691
+++ GYA++G GK +T T+L E
Sbjct: 666 TIMHGYASLGDTGKAFTYFTKLRDE 690
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/188 (20%), Positives = 70/188 (37%), Gaps = 37/188 (19%)
Query: 492 GHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARS 551
G ++ G + +A + ++M G+ SS VY +L+ AY E + +R +
Sbjct: 315 GLMVNYYTRRGDMHRARETFEKMRARGIEPSSHVYTNLIHAYAVGRDMEEALSCVRKMKE 374
Query: 552 AGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAG 611
GI++ Y L+ + A H F+E KE H ++ G
Sbjct: 375 EGIEMSLVTYSILVSGFAKTGNAESADHWFQEAKEK------HSSLNAIIYG-------- 420
Query: 612 LMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSM 671
N+I+ +C++ M AE ++ M G +H+M
Sbjct: 421 -----------------------NIIYAYCQRCNMDKAEALVREMEEEGIDAPIDIYHTM 457
Query: 672 VTGYAAIG 679
+ GY +G
Sbjct: 458 MDGYTMVG 465
Score = 45.1 bits (105), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 30/143 (20%), Positives = 63/143 (44%), Gaps = 8/143 (5%)
Query: 453 IYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQAHDLLD 512
IY L+ + G E + + ++E +Q D I C G + +A ++
Sbjct: 733 IYNILIDGWARRGDIWEAADLMQQMKREGVQP--DIHTYTSFINACSKAGDMQRATKTIE 790
Query: 513 EMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQK 572
EM GV+ + Y +L+ + A+ P + + + + +G++ D + Y L+ S + +
Sbjct: 791 EMKSVGVKPNVKTYTTLINGWARASLPEKALSCFEEMKLSGLKPDRAVYHCLMTSLLSRA 850
Query: 573 DT------PGALHLFKEMKESKI 589
PG L + +EM + ++
Sbjct: 851 TVAHGCIYPGILSVCREMVDCEL 873
>gi|224097576|ref|XP_002310993.1| predicted protein [Populus trichocarpa]
gi|222850813|gb|EEE88360.1| predicted protein [Populus trichocarpa]
Length = 877
Score = 92.4 bits (228), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 97/414 (23%), Positives = 184/414 (44%), Gaps = 43/414 (10%)
Query: 271 KAEQLLDIMPRIGVKADSNLLIIMAHIYERNGRREELRKLQRHIDEAVNLSDIQFRQFYN 330
+AE L+ M G+ A ++ M + Y G E+ + + + E + Y
Sbjct: 396 RAESLVREMEEEGIDAPIDIYHTMMNGYTMIGNEEKCLIVFKRLKECGFAPSVIS---YG 452
Query: 331 CLLSCHLKFGDLNSASKMVLEMLQRAKEARNSLAAAMLPFNAVGVNNRTPSEQNVNCTNS 390
CL++ + K G ++ A + V +M++ A N +ML + + + T
Sbjct: 453 CLINMYTKMGKVSKALE-VSKMMESAGIKHNMKTYSMLINGFLKLKDWT----------- 500
Query: 391 VDLENSGIIENHILSYEDFTKDRKFVALEAEV---KRVLQTLLGM--LQKQVELIT-TEH 444
N +ED KD L+ +V +++ GM + + + ++ +
Sbjct: 501 ----------NAFTVFEDVIKD----GLKPDVVLYNNIIKAFCGMGNMDRAIHMVKEMQK 546
Query: 445 GILQPTEKIYIKLVKAFLEAGKTKE-LTHFLIKAEKENLQVSHDDAALGHVITLCISLGW 503
+PT + ++ ++ F AG+ + L F + + H AL V+ L +
Sbjct: 547 KRHRPTSRTFMPIIHGFARAGEMRRALEIFDMMRRSGCIPTVHTFNAL--VLGL-VEKRQ 603
Query: 504 LDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEA 563
+++A ++LDEM LAGV Y +++ Y + R+ G++LD YEA
Sbjct: 604 MEKAVEILDEMALAGVSPDEHTYTTIMNGYAALGDTGKAFEYFTKLRNEGLELDVFTYEA 663
Query: 564 LLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVK-E 622
LL++ AL + +EM IPR+ + +L+ G A+ + A L+Q++K E
Sbjct: 664 LLKACCKSGRMQSALAVTREMSAQNIPRNTFV-YNILIDGWARRGDVWEAADLMQQMKQE 722
Query: 623 GQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYA 676
G + D +H + + I+ CK M A K ++ M +LG PN +T+ +++ G+A
Sbjct: 723 GVQPD--IHTYTSFINACCKAGDMLRATKTIQEMEALGVKPNVKTYTTLIHGWA 774
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 45/192 (23%), Positives = 93/192 (48%), Gaps = 6/192 (3%)
Query: 490 ALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDA 549
+ G +I + +G + +A ++ M AG++ + Y+ L+ +++ + D
Sbjct: 450 SYGCLINMYTKMGKVSKALEVSKMMESAGIKHNMKTYSMLINGFLKLKDWTNAFTVFEDV 509
Query: 550 RSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHE 609
G++ D Y ++++ + A+H+ KEM++ + R + F ++ G A+
Sbjct: 510 IKDGLKPDVVLYNNIIKAFCGMGNMDRAIHMVKEMQKKR-HRPTSRTFMPIIHGFAR--- 565
Query: 610 AGLMAKLLQEVKEGQRIDC--GVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQT 667
AG M + L+ +R C VH +N ++ +KR M+ A + L M G P+ T
Sbjct: 566 AGEMRRALEIFDMMRRSGCIPTVHTFNALVLGLVEKRQMEKAVEILDEMALAGVSPDEHT 625
Query: 668 FHSMVTGYAAIG 679
+ +++ GYAA+G
Sbjct: 626 YTTIMNGYAALG 637
Score = 41.2 bits (95), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 31/143 (21%), Positives = 61/143 (42%), Gaps = 8/143 (5%)
Query: 453 IYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQAHDLLD 512
+Y L+ + G E + + ++E +Q D I C G + +A +
Sbjct: 695 VYNILIDGWARRGDVWEAADLMQQMKQEGVQ--PDIHTYTSFINACCKAGDMLRATKTIQ 752
Query: 513 EMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQK 572
EM GV+ + Y +L+ + A+ P + + + AG++ D + Y L+ S + +
Sbjct: 753 EMEALGVKPNVKTYTTLIHGWACASLPEKALRCFEEMKLAGLKPDKAVYHCLMTSLLSRA 812
Query: 573 DT------PGALHLFKEMKESKI 589
G L + +EM ES++
Sbjct: 813 TVAEAYIYSGILSICREMIESEL 835
>gi|225464410|ref|XP_002269194.1| PREDICTED: pentatricopeptide repeat-containing protein At5g04810,
chloroplastic [Vitis vinifera]
Length = 929
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 104/432 (24%), Positives = 187/432 (43%), Gaps = 52/432 (12%)
Query: 257 NIALAGCLLFETTRKAEQLLDIMPRIGVKADSNLLIIMAHIYERNGRREE-LRKLQRHID 315
NI A C T +AE L+ M G+ A ++ M Y G E+ L R +
Sbjct: 399 NIIYAHCQACNMT-QAEALVREMEEEGIDAPIDIYHTMMDGYTIIGNEEKCLIVFDRLKE 457
Query: 316 EAVNLSDIQFRQFYNCLLSCHLKFGDLNSASKMVLEMLQRAKEARNSLAAAMLPFNAVGV 375
S I Y CL++ ++K G ++ A + V +M++ A N +ML V +
Sbjct: 458 CGFTPSVIS----YGCLINLYIKIGKVSKALE-VSKMMEVAGIKHNMKTYSMLINGFVRL 512
Query: 376 NNRTPSEQNVNCTNSVDLENSGIIENHILSYEDFTKDRKFVALEAEV---KRVLQTLLGM 432
+ N +ED KD L+ +V +++ GM
Sbjct: 513 KDWA---------------------NAFAVFEDVVKD----GLKPDVVLYNNIIRAFCGM 547
Query: 433 ------LQKQVELITTEHGILQPTEKIYIKLVKAFLEAGKTKE-LTHFLIKAEKENLQVS 485
++ E+ H +PT + ++ ++ F +G + L F + +
Sbjct: 548 GNMDRAIRTVKEMQKERH---RPTTRTFMPIIHGFARSGDMRRALEIFDMMRWSGCIPTV 604
Query: 486 HDDAALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTAL 545
H AL I + +++A ++LDEM LAG+ + Y +++ Y +
Sbjct: 605 HTFNAL---ILGLVEKCQMEKAVEILDEMSLAGISPNEHTYTTIMHGYASLGDTGKAFEY 661
Query: 546 LRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCA 605
++ G++LD YEALL++ AL + +EM KIPR+ + +L+ G A
Sbjct: 662 FTKLKTEGLELDVYTYEALLKACCKSGRMQSALAVTREMSSQKIPRNTFV-YNILIDGWA 720
Query: 606 QNHEAGLMAKLLQEVK-EGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPN 664
+ + A+L+Q++K EG + D +H + + I+ CK MQ A K ++ M +G PN
Sbjct: 721 RRGDVWEAAELMQQMKQEGVQPD--IHTYTSFINACCKAGDMQRATKTIQEMEVVGVKPN 778
Query: 665 AQTFHSMVTGYA 676
+T+ +++ G+A
Sbjct: 779 IKTYTTLIHGWA 790
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 45/192 (23%), Positives = 91/192 (47%), Gaps = 6/192 (3%)
Query: 490 ALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDA 549
+ G +I L I +G + +A ++ M +AG++ + Y+ L+ ++ A+ D
Sbjct: 466 SYGCLINLYIKIGKVSKALEVSKMMEVAGIKHNMKTYSMLINGFVRLKDWANAFAVFEDV 525
Query: 550 RSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHE 609
G++ D Y ++++ + A+ KEM++ + R + F ++ G A+
Sbjct: 526 VKDGLKPDVVLYNNIIRAFCGMGNMDRAIRTVKEMQKER-HRPTTRTFMPIIHGFAR--- 581
Query: 610 AGLMAKLLQEVKEGQRIDC--GVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQT 667
+G M + L+ + C VH +N +I +K M+ A + L M G PN T
Sbjct: 582 SGDMRRALEIFDMMRWSGCIPTVHTFNALILGLVEKCQMEKAVEILDEMSLAGISPNEHT 641
Query: 668 FHSMVTGYAAIG 679
+ +++ GYA++G
Sbjct: 642 YTTIMHGYASLG 653
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/227 (22%), Positives = 94/227 (41%), Gaps = 6/227 (2%)
Query: 454 YIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQAHDLLDE 513
Y LV F + + H+ +A++ + + + G++I + QA L+ E
Sbjct: 362 YSILVGGFAKIADAEAADHWFKEAKERHTTL--NAIIYGNIIYAHCQACNMTQAEALVRE 419
Query: 514 MHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQKD 573
M G+ A +Y +++ Y + + + G Y L+ I
Sbjct: 420 MEEEGIDAPIDIYHTMMDGYTIIGNEEKCLIVFDRLKECGFTPSVISYGCLINLYIKIGK 479
Query: 574 TPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHE-AGLMAKLLQEVKEGQRIDCGVHD 632
AL + K M+ + I + + + ML+ G + + A A VK+G + D V
Sbjct: 480 VSKALEVSKMMEVAGI-KHNMKTYSMLINGFVRLKDWANAFAVFEDVVKDGLKPD--VVL 536
Query: 633 WNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIG 679
+NN+I FC M A + +K M+ H P +TF ++ G+A G
Sbjct: 537 YNNIIRAFCGMGNMDRAIRTVKEMQKERHRPTTRTFMPIIHGFARSG 583
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/191 (22%), Positives = 67/191 (35%), Gaps = 37/191 (19%)
Query: 491 LGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDAR 550
G ++T G + A + M G+ +S VY SL+ AY E + +R +
Sbjct: 292 FGLMVTYYARRGDMHHARGTFESMRARGIEPTSHVYTSLIHAYAVGRDMEEALSCVRKMK 351
Query: 551 SAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEA 610
GI++ Y L+ D A H FKE KE H ++ G
Sbjct: 352 EEGIEMSLVTYSILVGGFAKIADAEAADHWFKEAKER------HTTLNAIIYG------- 398
Query: 611 GLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHS 670
N+I+ C+ M AE ++ M G +H+
Sbjct: 399 ------------------------NIIYAHCQACNMTQAEALVREMEEEGIDAPIDIYHT 434
Query: 671 MVTGYAAIGGK 681
M+ GY IG +
Sbjct: 435 MMDGYTIIGNE 445
Score = 47.0 bits (110), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 26/115 (22%), Positives = 52/115 (45%), Gaps = 2/115 (1%)
Query: 453 IYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQAHDLLD 512
+Y L+ + G E + + ++E +Q D I C G + +A +
Sbjct: 711 VYNILIDGWARRGDVWEAAELMQQMKQEGVQP--DIHTYTSFINACCKAGDMQRATKTIQ 768
Query: 513 EMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQS 567
EM + GV+ + Y +L+ + A+ P + ++ +SAG++ D + Y L+ S
Sbjct: 769 EMEVVGVKPNIKTYTTLIHGWARASLPEKALKCFQEMKSAGLKPDKAVYHCLMTS 823
Score = 40.4 bits (93), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 48/241 (19%), Positives = 96/241 (39%), Gaps = 9/241 (3%)
Query: 493 HVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSA 552
++I +G +D+A + EM R ++ + ++ + + R + R +
Sbjct: 539 NIIRAFCGMGNMDRAIRTVKEMQKERHRPTTRTFMPIIHGFARSGDMRRALEIFDMMRWS 598
Query: 553 GIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGL 612
G + AL+ + + A+ + EM + I + H + ++ G A + G
Sbjct: 599 GCIPTVHTFNALILGLVEKCQMEKAVEILDEMSLAGISPNEHT-YTTIMHGYASLGDTGK 657
Query: 613 MAKLLQEVK-EGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSM 671
+ ++K EG +D V+ + ++ CK MQ A + M S N ++ +
Sbjct: 658 AFEYFTKLKTEGLELD--VYTYEALLKACCKSGRMQSALAVTREMSSQKIPRNTFVYNIL 715
Query: 672 VTGYAAIGGKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMM 731
+ G+A G + E EL +MK + D S + + G RA + + M
Sbjct: 716 IDGWARRGDVW-EAAELMQQMK----QEGVQPDIHTYTSFINACCKAGDMQRATKTIQEM 770
Query: 732 E 732
E
Sbjct: 771 E 771
>gi|296084463|emb|CBI25022.3| unnamed protein product [Vitis vinifera]
Length = 927
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 104/432 (24%), Positives = 187/432 (43%), Gaps = 52/432 (12%)
Query: 257 NIALAGCLLFETTRKAEQLLDIMPRIGVKADSNLLIIMAHIYERNGRREE-LRKLQRHID 315
NI A C T +AE L+ M G+ A ++ M Y G E+ L R +
Sbjct: 378 NIIYAHCQACNMT-QAEALVREMEEEGIDAPIDIYHTMMDGYTIIGNEEKCLIVFDRLKE 436
Query: 316 EAVNLSDIQFRQFYNCLLSCHLKFGDLNSASKMVLEMLQRAKEARNSLAAAMLPFNAVGV 375
S I Y CL++ ++K G ++ A + V +M++ A N +ML V +
Sbjct: 437 CGFTPSVIS----YGCLINLYIKIGKVSKALE-VSKMMEVAGIKHNMKTYSMLINGFVRL 491
Query: 376 NNRTPSEQNVNCTNSVDLENSGIIENHILSYEDFTKDRKFVALEAEV---KRVLQTLLGM 432
+ N +ED KD L+ +V +++ GM
Sbjct: 492 KDWA---------------------NAFAVFEDVVKD----GLKPDVVLYNNIIRAFCGM 526
Query: 433 ------LQKQVELITTEHGILQPTEKIYIKLVKAFLEAGKTKE-LTHFLIKAEKENLQVS 485
++ E+ H +PT + ++ ++ F +G + L F + +
Sbjct: 527 GNMDRAIRTVKEMQKERH---RPTTRTFMPIIHGFARSGDMRRALEIFDMMRWSGCIPTV 583
Query: 486 HDDAALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTAL 545
H AL I + +++A ++LDEM LAG+ + Y +++ Y +
Sbjct: 584 HTFNAL---ILGLVEKCQMEKAVEILDEMSLAGISPNEHTYTTIMHGYASLGDTGKAFEY 640
Query: 546 LRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCA 605
++ G++LD YEALL++ AL + +EM KIPR+ + +L+ G A
Sbjct: 641 FTKLKTEGLELDVYTYEALLKACCKSGRMQSALAVTREMSSQKIPRNTFV-YNILIDGWA 699
Query: 606 QNHEAGLMAKLLQEVK-EGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPN 664
+ + A+L+Q++K EG + D +H + + I+ CK MQ A K ++ M +G PN
Sbjct: 700 RRGDVWEAAELMQQMKQEGVQPD--IHTYTSFINACCKAGDMQRATKTIQEMEVVGVKPN 757
Query: 665 AQTFHSMVTGYA 676
+T+ +++ G+A
Sbjct: 758 IKTYTTLIHGWA 769
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/192 (23%), Positives = 91/192 (47%), Gaps = 6/192 (3%)
Query: 490 ALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDA 549
+ G +I L I +G + +A ++ M +AG++ + Y+ L+ ++ A+ D
Sbjct: 445 SYGCLINLYIKIGKVSKALEVSKMMEVAGIKHNMKTYSMLINGFVRLKDWANAFAVFEDV 504
Query: 550 RSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHE 609
G++ D Y ++++ + A+ KEM++ + R + F ++ G A+
Sbjct: 505 VKDGLKPDVVLYNNIIRAFCGMGNMDRAIRTVKEMQKER-HRPTTRTFMPIIHGFAR--- 560
Query: 610 AGLMAKLLQEVKEGQRIDC--GVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQT 667
+G M + L+ + C VH +N +I +K M+ A + L M G PN T
Sbjct: 561 SGDMRRALEIFDMMRWSGCIPTVHTFNALILGLVEKCQMEKAVEILDEMSLAGISPNEHT 620
Query: 668 FHSMVTGYAAIG 679
+ +++ GYA++G
Sbjct: 621 YTTIMHGYASLG 632
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/227 (22%), Positives = 94/227 (41%), Gaps = 6/227 (2%)
Query: 454 YIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQAHDLLDE 513
Y LV F + + H+ +A++ + + + G++I + QA L+ E
Sbjct: 341 YSILVGGFAKIADAEAADHWFKEAKERHTTL--NAIIYGNIIYAHCQACNMTQAEALVRE 398
Query: 514 MHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQKD 573
M G+ A +Y +++ Y + + + G Y L+ I
Sbjct: 399 MEEEGIDAPIDIYHTMMDGYTIIGNEEKCLIVFDRLKECGFTPSVISYGCLINLYIKIGK 458
Query: 574 TPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHE-AGLMAKLLQEVKEGQRIDCGVHD 632
AL + K M+ + I + + + ML+ G + + A A VK+G + D V
Sbjct: 459 VSKALEVSKMMEVAGI-KHNMKTYSMLINGFVRLKDWANAFAVFEDVVKDGLKPD--VVL 515
Query: 633 WNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIG 679
+NN+I FC M A + +K M+ H P +TF ++ G+A G
Sbjct: 516 YNNIIRAFCGMGNMDRAIRTVKEMQKERHRPTTRTFMPIIHGFARSG 562
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/191 (22%), Positives = 67/191 (35%), Gaps = 37/191 (19%)
Query: 491 LGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDAR 550
G ++T G + A + M G+ +S VY SL+ AY E + +R +
Sbjct: 271 FGLMVTYYARRGDMHHARGTFESMRARGIEPTSHVYTSLIHAYAVGRDMEEALSCVRKMK 330
Query: 551 SAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEA 610
GI++ Y L+ D A H FKE KE H ++ G
Sbjct: 331 EEGIEMSLVTYSILVGGFAKIADAEAADHWFKEAKER------HTTLNAIIYG------- 377
Query: 611 GLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHS 670
N+I+ C+ M AE ++ M G +H+
Sbjct: 378 ------------------------NIIYAHCQACNMTQAEALVREMEEEGIDAPIDIYHT 413
Query: 671 MVTGYAAIGGK 681
M+ GY IG +
Sbjct: 414 MMDGYTIIGNE 424
Score = 47.0 bits (110), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 26/115 (22%), Positives = 52/115 (45%), Gaps = 2/115 (1%)
Query: 453 IYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQAHDLLD 512
+Y L+ + G E + + ++E +Q D I C G + +A +
Sbjct: 690 VYNILIDGWARRGDVWEAAELMQQMKQEGVQP--DIHTYTSFINACCKAGDMQRATKTIQ 747
Query: 513 EMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQS 567
EM + GV+ + Y +L+ + A+ P + ++ +SAG++ D + Y L+ S
Sbjct: 748 EMEVVGVKPNIKTYTTLIHGWARASLPEKALKCFQEMKSAGLKPDKAVYHCLMTS 802
Score = 40.4 bits (93), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 49/247 (19%), Positives = 97/247 (39%), Gaps = 9/247 (3%)
Query: 487 DDAALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALL 546
D ++I +G +D+A + EM R ++ + ++ + + R +
Sbjct: 512 DVVLYNNIIRAFCGMGNMDRAIRTVKEMQKERHRPTTRTFMPIIHGFARSGDMRRALEIF 571
Query: 547 RDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQ 606
R +G + AL+ + + A+ + EM + I + H + ++ G A
Sbjct: 572 DMMRWSGCIPTVHTFNALILGLVEKCQMEKAVEILDEMSLAGISPNEHT-YTTIMHGYAS 630
Query: 607 NHEAGLMAKLLQEVK-EGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNA 665
+ G + ++K EG +D V+ + ++ CK MQ A + M S N
Sbjct: 631 LGDTGKAFEYFTKLKTEGLELD--VYTYEALLKACCKSGRMQSALAVTREMSSQKIPRNT 688
Query: 666 QTFHSMVTGYAAIGGKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARAN 725
++ ++ G+A G + E EL +MK + D S + + G RA
Sbjct: 689 FVYNILIDGWARRGDVW-EAAELMQQMK----QEGVQPDIHTYTSFINACCKAGDMQRAT 743
Query: 726 EVVAMME 732
+ + ME
Sbjct: 744 KTIQEME 750
>gi|255549482|ref|XP_002515794.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223545122|gb|EEF46633.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 924
Score = 89.7 bits (221), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 99/413 (23%), Positives = 177/413 (42%), Gaps = 41/413 (9%)
Query: 271 KAEQLLDIMPRIGVKADSNLLIIMAHIYERNGRREELRKLQRHIDEAVNLSDIQFRQFYN 330
+AE L+ M G+ A ++ M Y G E+ + + E + Y
Sbjct: 429 QAEALVREMEGEGIDAPIDIYHTMMDGYTMVGNEEKCLTVFERLKECGFAPSVVS---YG 485
Query: 331 CLLSCHLKFGDLNSASKMVLEMLQRAKEARNSLAAAMLPFNAVGVNNRTPSEQNVNCTNS 390
CL++ + K G ++ A + V +M++ A N +ML + +
Sbjct: 486 CLINLYAKVGKISKALE-VSKMMESAGIKHNMKTYSMLINGFLKLK-------------- 530
Query: 391 VDLENSGIIENHILSYEDFTKD--RKFVALEAEVKRVLQTLLGMLQKQV----ELITTEH 444
D N+ I +ED KD + V L + R +G + + + E+ H
Sbjct: 531 -DWANAFAI------FEDVVKDGLKPDVVLYNNIIRAF-CGMGTMDRAICMVKEMQKERH 582
Query: 445 GILQPTEKIYIKLVKAFLEAGKTKE-LTHFLIKAEKENLQVSHDDAALGHVITLCISLGW 503
+PT + ++ ++ F AG+ K L F + + H AL I +
Sbjct: 583 ---RPTSRTFMPIIHGFARAGEMKRALDVFDMMRRSGCIPTVHTFNAL---ILGLVEKRQ 636
Query: 504 LDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEA 563
+++A ++LDEM LAGV + Y +++ Y + R G+QLD YEA
Sbjct: 637 MEKAIEILDEMALAGVSPNEHTYTTIMHGYAALGDTGKAFEYFTKLRDEGLQLDVYTYEA 696
Query: 564 LLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEG 623
LL++ AL + KEM IPR+ + +L+ G A+ + A L+Q++K+G
Sbjct: 697 LLKACCKSGRMQSALAVTKEMSAQNIPRNTFV-YNILIDGWARRGDVWEAADLMQQMKQG 755
Query: 624 QRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYA 676
+ +H + + I+ CK M A K ++ M + G PN +T+ +++ G+A
Sbjct: 756 G-VKPDIHTYTSFINACCKAGDMLRASKMMEEMETSGVKPNVKTYTTLIHGWA 807
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 89/415 (21%), Positives = 173/415 (41%), Gaps = 50/415 (12%)
Query: 299 ERNGRREELRKLQRHIDEAVNLSDI---------QFRQFYNCLLSCHLKFGDLNSASKMV 349
ER+G R+ R++ E N D+ R+ Y ++S + + GD++ A +
Sbjct: 272 ERDGSRKAFRRVLETQPE--NWQDVVSAFERIKKPSRREYGLMVSYYARRGDMHRARQTF 329
Query: 350 LEMLQRAKEARNSLAAAMLPFNAVGVNNRTPSEQNVNCTNSVDLENSGIIENHILSYE-- 407
M R E + + +++ AVG + E+ ++C + E +E +++Y
Sbjct: 330 ESMRARGIEPTSHVYTSLIHAYAVGRD----MEEALSCARKMKEEG---VEMSLVTYSII 382
Query: 408 --DFTK-------DRKFVALEAEVKRVLQTLLGML---------QKQVELITTE---HGI 446
F K DR F + + + G + Q E + E GI
Sbjct: 383 VGGFAKIGNADAADRWFKEAKDRHSHMNAIIYGNMIYAYCQTCNMDQAEALVREMEGEGI 442
Query: 447 LQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQ 506
P + IY ++ + G ++ + ++ S + G +I L +G + +
Sbjct: 443 DAPID-IYHTMMDGYTMVGNEEKCLTVFERLKECGFAPSV--VSYGCLINLYAKVGKISK 499
Query: 507 AHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQ 566
A ++ M AG++ + Y+ L+ +++ A+ D G++ D Y +++
Sbjct: 500 ALEVSKMMESAGIKHNMKTYSMLINGFLKLKDWANAFAIFEDVVKDGLKPDVVLYNNIIR 559
Query: 567 SKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRI 626
+ A+ + KEM++ + R + F ++ G A+ AG M + L +R
Sbjct: 560 AFCGMGTMDRAICMVKEMQKER-HRPTSRTFMPIIHGFAR---AGEMKRALDVFDMMRRS 615
Query: 627 DC--GVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIG 679
C VH +N +I +KR M+ A + L M G PN T+ +++ GYAA+G
Sbjct: 616 GCIPTVHTFNALILGLVEKRQMEKAIEILDEMALAGVSPNEHTYTTIMHGYAALG 670
Score = 45.8 bits (107), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 25/101 (24%), Positives = 50/101 (49%), Gaps = 6/101 (5%)
Query: 495 ITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGI 554
I C G + +A +++EM +GV+ + Y +L+ + A+ P + ++ + AG+
Sbjct: 768 INACCKAGDMLRASKMMEEMETSGVKPNVKTYTTLIHGWARASLPEKALRCFQEMKLAGL 827
Query: 555 QLDASCYEALLQSKIVQKDT------PGALHLFKEMKESKI 589
+ D + Y L+ + + + PG L + KEM ES +
Sbjct: 828 KPDKAVYHCLMTALLSRATVTEAYVRPGILSICKEMIESGL 868
Score = 45.4 bits (106), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 49/213 (23%), Positives = 92/213 (43%), Gaps = 7/213 (3%)
Query: 520 RASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALH 579
+ S Y ++ Y R+ GI+ + Y +L+ + V +D AL
Sbjct: 303 KPSRREYGLMVSYYARRGDMHRARQTFESMRARGIEPTSHVYTSLIHAYAVGRDMEEALS 362
Query: 580 LFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRIDCGVHDWNNVIHF 639
++MKE + S + ++V G A+ A + +E K+ + + N+I+
Sbjct: 363 CARKMKEEGVEMS-LVTYSIIVGGFAKIGNADAADRWFKEAKD-RHSHMNAIIYGNMIYA 420
Query: 640 FCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEMKSFASST 699
+C+ M AE ++ M G +H+M+ GY +G + +T ++ +K +
Sbjct: 421 YCQTCNMDQAEALVREMEGEGIDAPIDIYHTMMDGYTMVGNEEKCLT-VFERLKECGFAP 479
Query: 700 SMNFDEELLDSVLYTFVRGGFFARANEVVAMME 732
S+ L++ LY V G ++A EV MME
Sbjct: 480 SVVSYGCLIN--LYAKV--GKISKALEVSKMME 508
Score = 43.9 bits (102), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 46/227 (20%), Positives = 96/227 (42%), Gaps = 15/227 (6%)
Query: 492 GHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARS 551
G +++ G + +A + M G+ +S VY SL+ AY E + R +
Sbjct: 310 GLMVSYYARRGDMHRARQTFESMRARGIEPTSHVYTSLIHAYAVGRDMEEALSCARKMKE 369
Query: 552 AGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQE---FEMLVKGCAQNH 608
G+++ Y ++ + A FKE K+ R H + ++ Q
Sbjct: 370 EGVEMSLVTYSIIVGGFAKIGNADAADRWFKEAKD----RHSHMNAIIYGNMIYAYCQTC 425
Query: 609 EAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKAL---KRMRSLGHLPNA 665
L++E+ EG+ ID + ++ ++ + ++ + EK L +R++ G P+
Sbjct: 426 NMDQAEALVREM-EGEGIDAPIDIYHTMMDGYT---MVGNEEKCLTVFERLKECGFAPSV 481
Query: 666 QTFHSMVTGYAAIGGKYTEVTELWGEMKSFASSTSMNFDEELLDSVL 712
++ ++ YA + GK ++ E+ M+S +M L++ L
Sbjct: 482 VSYGCLINLYAKV-GKISKALEVSKMMESAGIKHNMKTYSMLINGFL 527
Score = 43.5 bits (101), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 95/522 (18%), Positives = 195/522 (37%), Gaps = 45/522 (8%)
Query: 250 KPNTNTFNIALAGCLLFETTRKAEQLLDIMPRIGVKADSNLLIIMAHIYERNGRREELRK 309
KP+ + + ++ +A Q + M G++ S++ + H Y EE
Sbjct: 303 KPSRREYGLMVSYYARRGDMHRARQTFESMRARGIEPTSHVYTSLIHAYAVGRDMEEALS 362
Query: 310 LQRHI-DEAVNLSDIQFRQFYNCLLSCHLKFGDLNSASKMVLEMLQRAKEARNSLAAAML 368
R + +E V +S + Y+ ++ K G+ ++A + E R N++ +
Sbjct: 363 CARKMKEEGVEMSLVT----YSIIVGGFAKIGNADAADRWFKEAKDRHSHM-NAIIYGNM 417
Query: 369 PFNAVGVNNRTPSEQNVNCTNSVDLENSGIIENHILSYEDFTKDRKFVALEAEVKRVLQT 428
+ N +E V ++E GI + I Y V E + V +
Sbjct: 418 IYAYCQTCNMDQAEALVR-----EMEGEGI-DAPIDIYHTMMDGYTMVGNEEKCLTVFER 471
Query: 429 L---------------------LGMLQKQVELITT-EHGILQPTEKIYIKLVKAFLEAGK 466
L +G + K +E+ E ++ K Y L+ FL+
Sbjct: 472 LKECGFAPSVVSYGCLINLYAKVGKISKALEVSKMMESAGIKHNMKTYSMLINGFLKLKD 531
Query: 467 TKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVY 526
K+ L+ D ++I +G +D+A ++ EM R +S +
Sbjct: 532 WANAFAIFEDVVKDGLKP--DVVLYNNIIRAFCGMGTMDRAICMVKEMQKERHRPTSRTF 589
Query: 527 ASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKE 586
++ + A + + R +G + AL+ + ++ A+ + EM
Sbjct: 590 MPIIHGFARAGEMKRALDVFDMMRRSGCIPTVHTFNALILGLVEKRQMEKAIEILDEMAL 649
Query: 587 SKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVK-EGQRIDCGVHDWNNVIHFFCKKRL 645
+ + + H + ++ G A + G + +++ EG ++D V+ + ++ CK
Sbjct: 650 AGVSPNEHT-YTTIMHGYAALGDTGKAFEYFTKLRDEGLQLD--VYTYEALLKACCKSGR 706
Query: 646 MQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEMKSFASSTSMNFDE 705
MQ A K M + N ++ ++ G+A G + E +L +MK + D
Sbjct: 707 MQSALAVTKEMSAQNIPRNTFVYNILIDGWARRGDVW-EAADLMQQMK----QGGVKPDI 761
Query: 706 ELLDSVLYTFVRGGFFARANEVVAMMEEGKMFIDKYKYRTLF 747
S + + G RA++++ ME + + Y TL
Sbjct: 762 HTYTSFINACCKAGDMLRASKMMEEMETSGVKPNVKTYTTLI 803
>gi|356577532|ref|XP_003556878.1| PREDICTED: pentatricopeptide repeat-containing protein At5g04810,
chloroplastic-like [Glycine max]
Length = 932
Score = 89.0 bits (219), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 74/284 (26%), Positives = 135/284 (47%), Gaps = 18/284 (6%)
Query: 401 NHILSYEDFTKDRKFVALEAEV---KRVLQTLLGM--LQKQVELI-TTEHGILQPTEKIY 454
N +EDFTKD L+ +V ++ GM + + + ++ + +PT + +
Sbjct: 512 NAFSVFEDFTKD----GLKPDVVLYNNIITAFCGMGNMDRAICMVRQMQKERHRPTTRTF 567
Query: 455 IKLVKAFLEAGKTKE-LTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQAHDLLDE 513
+ ++ F AG+ + L F + + H AL I + + +A +LDE
Sbjct: 568 LPIIHGFARAGEMRRALEIFDMMRRSGCIPTVHTYNAL---ILGLVEKRQMTKAVAILDE 624
Query: 514 MHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQKD 573
M++AGV + Y +L++ Y + R+ G+++D YEALL+S
Sbjct: 625 MNVAGVGPNEHTYTTLMQGYASLGDTEKAFQYFTVLRNEGLEIDVYTYEALLKSCCKSGR 684
Query: 574 TPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEV-KEGQRIDCGVHD 632
AL + KEM IPR+ + +L+ G A+ + A L+Q++ KEG D +H
Sbjct: 685 MQSALAVTKEMSAKNIPRNTFV-YNILIDGWARRGDVWEAADLMQQMRKEGLLPD--IHT 741
Query: 633 WNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYA 676
+ + I+ CK MQ A + ++ M + G PN +T+ +++ G+A
Sbjct: 742 YTSFINACCKAGDMQKATEIIQEMEASGIKPNLKTYTTLINGWA 785
Score = 48.1 bits (113), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 44/195 (22%), Positives = 85/195 (43%), Gaps = 9/195 (4%)
Query: 502 GWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCY 561
G + A + M G+ SS VY+SL+ AY E +R + GI++ Y
Sbjct: 298 GDMHHARQTFESMRARGIEPSSHVYSSLIHAYAVGRDMEEALHCVRKMKEEGIEMTIVTY 357
Query: 562 EALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVK 621
++ + A H F+E KE K+P + ++ Q L++E++
Sbjct: 358 SIIVGGFAKMGNADAADHWFEEAKE-KLPSLNAVIYGGIIYAHCQICNMDRAEALVREME 416
Query: 622 EGQRIDCGVHDWNNVIHFFCKKRLMQDAEKAL---KRMRSLGHLPNAQTFHSMVTGYAAI 678
E Q ID + ++ ++ + ++ + EK L R++ G P+ ++ ++ Y +
Sbjct: 417 E-QGIDAPIDIYHTMMDGYT---MIGNEEKCLIVFDRLKECGFFPSVISYGCLINLYTKV 472
Query: 679 GGKYTEVTELWGEMK 693
GK ++ E+ MK
Sbjct: 473 -GKVSKALEISKMMK 486
Score = 47.0 bits (110), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 37/156 (23%), Positives = 65/156 (41%), Gaps = 2/156 (1%)
Query: 526 YASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMK 585
Y ++K Y R+ GI+ + Y +L+ + V +D ALH ++MK
Sbjct: 287 YGLMVKYYGRRGDMHHARQTFESMRARGIEPSSHVYSSLIHAYAVGRDMEEALHCVRKMK 346
Query: 586 ESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRL 645
E I + + ++V G A+ A +E KE + + +I+ C+
Sbjct: 347 EEGIEMT-IVTYSIIVGGFAKMGNADAADHWFEEAKE-KLPSLNAVIYGGIIYAHCQICN 404
Query: 646 MQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGK 681
M AE ++ M G +H+M+ GY IG +
Sbjct: 405 MDRAEALVREMEEQGIDAPIDIYHTMMDGYTMIGNE 440
>gi|356533316|ref|XP_003535211.1| PREDICTED: pentatricopeptide repeat-containing protein At5g04810,
chloroplastic-like [Glycine max]
Length = 918
Score = 88.2 bits (217), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 72/284 (25%), Positives = 135/284 (47%), Gaps = 18/284 (6%)
Query: 401 NHILSYEDFTKDRKFVALEAEV---KRVLQTLLGM--LQKQVELITT-EHGILQPTEKIY 454
N +EDFTKD L+ +V ++ GM + + + ++ + +PT + +
Sbjct: 502 NAFSVFEDFTKD----GLKPDVVLYNNIITAFCGMSNMDRAICMVKQMQKERYRPTTRTF 557
Query: 455 IKLVKAFLEAGKTKE-LTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQAHDLLDE 513
+ ++ F AG+ + L F + + H AL I + + +A +LD+
Sbjct: 558 LPIIHGFARAGEMRRALEIFDMMRRSGCIPTVHTYNAL---ILGLVEKRKMAKAVAILDQ 614
Query: 514 MHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQKD 573
M++AGV + Y +L++ Y + R+ G+++D YEALL+S
Sbjct: 615 MNVAGVGPNEHTYTTLMQGYASLGDTEKAFQYFSVLRNEGLEIDVYTYEALLKSCCKSGR 674
Query: 574 TPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEV-KEGQRIDCGVHD 632
AL + KEM IPR+ + +L+ G A+ + A L+Q++ KEG D +H
Sbjct: 675 MQSALAVTKEMSAKNIPRNTFV-YNILIDGWARRGDVWEAADLMQQMRKEGVLPD--IHT 731
Query: 633 WNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYA 676
+ + ++ CK MQ A + ++ M + G PN +T+ +++ G+A
Sbjct: 732 YTSFVNACCKAGDMQKATEIIQEMEAFGIKPNLKTYTTLINGWA 775
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 86/413 (20%), Positives = 172/413 (41%), Gaps = 46/413 (11%)
Query: 299 ERNGRREELRKLQRHIDEAVNLSDIQF-------RQFYNCLLSCHLKFGDLNSASKMVLE 351
ER+G R+ +K+ E F R+ Y ++ + + GD++ A +
Sbjct: 240 ERDGSRKSFQKVLETQPENWQAVVTAFERIKKPARKEYGLMVKYYARRGDMHHARQTFES 299
Query: 352 MLQRAKEARNSLAAAMLPFNAVGVNNRTPSEQNVNCTNSVDLENSGIIENHILSYE---- 407
M R E + + ++++ AVG + E+ ++C + E IE I++Y
Sbjct: 300 MQARGIEPSSHVYSSLIHAYAVGRD----MEEALHCVRKMKEEG---IEMTIVTYSIIVG 352
Query: 408 DFTKDRKFVALE---AEVKRVLQTLLGMLQKQV-------------ELITTE---HGILQ 448
F K K A + E K L +L + + E + E GI
Sbjct: 353 GFAKMGKADAADHWFKEAKEKLPSLNAVTYGSIIYAHCQTCNMDRAEALVREMEVQGIDA 412
Query: 449 PTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQAH 508
P + IY ++ + G ++ ++ + S + G +I L +G + +A
Sbjct: 413 PID-IYHTMMDGYTMIGNEEKC--LIVFDRLKECGFSPSVISYGCLINLYTKIGKVSKAL 469
Query: 509 DLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSK 568
+ M ++G++ + Y+ L+ +++ ++ D G++ D Y ++ +
Sbjct: 470 QISKMMKMSGIKHNMKTYSMLINGFLKLKDWANAFSVFEDFTKDGLKPDVVLYNNIITAF 529
Query: 569 IVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRIDC 628
+ A+ + K+M++ + R + F ++ G A+ AG M + L+ +R C
Sbjct: 530 CGMSNMDRAICMVKQMQKERY-RPTTRTFLPIIHGFAR---AGEMRRALEIFDMMRRSGC 585
Query: 629 --GVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIG 679
VH +N +I +KR M A L +M G PN T+ +++ GYA++G
Sbjct: 586 IPTVHTYNALILGLVEKRKMAKAVAILDQMNVAGVGPNEHTYTTLMQGYASLG 638
>gi|224113413|ref|XP_002316488.1| predicted protein [Populus trichocarpa]
gi|222865528|gb|EEF02659.1| predicted protein [Populus trichocarpa]
Length = 941
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 85/356 (23%), Positives = 161/356 (45%), Gaps = 40/356 (11%)
Query: 329 YNCLLSCHLKFGDLNSASKMVLEMLQRAKEARNSLAAAMLPFNAVGVNNRTPSEQNVNCT 388
Y CL++ + K G ++ A + V +M++ N +ML + + + T
Sbjct: 472 YGCLINMYTKIGKVSKALE-VSKMMKSVGIKHNMKTYSMLINGFLKLKDWT--------- 521
Query: 389 NSVDLENSGIIENHILSYEDFTKDRKFVALEAEV---KRVLQTLLGM--LQKQVELIT-T 442
N +ED KD L+ +V +++ GM + + + ++
Sbjct: 522 ------------NAFAVFEDVIKD----GLKPDVVLYNNIIKAFCGMGNMDRAIHMVKEM 565
Query: 443 EHGILQPTEKIYIKLVKAFLEAGKTKE-LTHFLIKAEKENLQVSHDDAALGHVITLCISL 501
+ +PT + ++ ++ F AG+ + L F + + H AL V+ L +
Sbjct: 566 QKERCRPTSRTFMPIIHGFARAGEMRRALEIFDMMRRSGCIPTVHTFNAL--VLGL-VEK 622
Query: 502 GWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCY 561
+++A ++LDEM LAGV Y +++ Y + R+ G+QLD Y
Sbjct: 623 RKMEKAVEILDEMALAGVSPDEHTYTTIMHGYAALGDTGKAFEYFTKMRNEGLQLDVFTY 682
Query: 562 EALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEV- 620
EALL++ AL + +EM KIPR+ + +L+ G A+ + A L+Q++
Sbjct: 683 EALLKACCKSGRMQSALAVTREMNAQKIPRNTFV-YNILIDGWARRGDIWEAADLMQQMN 741
Query: 621 KEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYA 676
+EG + D +H + + I+ CK M A K ++ M + G PN +T+ +++ G+A
Sbjct: 742 QEGVQPD--IHTYTSFINACCKAGDMLRATKTMEEMEAAGVKPNVKTYTTLIHGWA 795
Score = 63.5 bits (153), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 45/190 (23%), Positives = 92/190 (48%), Gaps = 6/190 (3%)
Query: 492 GHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARS 551
G +I + +G + +A ++ M G++ + Y+ L+ +++ A+ D
Sbjct: 473 GCLINMYTKIGKVSKALEVSKMMKSVGIKHNMKTYSMLINGFLKLKDWTNAFAVFEDVIK 532
Query: 552 AGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAG 611
G++ D Y ++++ + A+H+ KEM++ + R + F ++ G A+ AG
Sbjct: 533 DGLKPDVVLYNNIIKAFCGMGNMDRAIHMVKEMQKERC-RPTSRTFMPIIHGFAR---AG 588
Query: 612 LMAKLLQEVKEGQRIDC--GVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFH 669
M + L+ +R C VH +N ++ +KR M+ A + L M G P+ T+
Sbjct: 589 EMRRALEIFDMMRRSGCIPTVHTFNALVLGLVEKRKMEKAVEILDEMALAGVSPDEHTYT 648
Query: 670 SMVTGYAAIG 679
+++ GYAA+G
Sbjct: 649 TIMHGYAALG 658
Score = 45.8 bits (107), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 48/214 (22%), Positives = 92/214 (42%), Gaps = 9/214 (4%)
Query: 502 GWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCY 561
G + +A + M G+ SS VY SL+ AY E + +R GI++ Y
Sbjct: 308 GDMHRARQTFESMRARGIDPSSHVYTSLIHAYAVGRDMEEALSCVRKMNEEGIEMSLVTY 367
Query: 562 EALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVK 621
++ + A FK+ KE + + ++ C Q L++E++
Sbjct: 368 SIVVGGFAKFGNAEAADCWFKKAKERHTNLNAYIYGNIIYAYC-QACNMDRAEALVREME 426
Query: 622 EGQRIDCGVHDWNNVIHFFCKKRLMQDAEKAL---KRMRSLGHLPNAQTFHSMVTGYAAI 678
E + ID + ++ ++ + ++++ EK L KR++ G P+ T+ ++ Y I
Sbjct: 427 E-EGIDAPLDIYHTMMDGYT---MIRNEEKCLIVFKRLKECGFAPSVITYGCLINMYTKI 482
Query: 679 GGKYTEVTELWGEMKSFASSTSMNFDEELLDSVL 712
GK ++ E+ MKS +M L++ L
Sbjct: 483 -GKVSKALEVSKMMKSVGIKHNMKTYSMLINGFL 515
Score = 43.5 bits (101), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 26/115 (22%), Positives = 51/115 (44%), Gaps = 2/115 (1%)
Query: 453 IYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQAHDLLD 512
+Y L+ + G E + + +E +Q D I C G + +A ++
Sbjct: 716 VYNILIDGWARRGDIWEAADLMQQMNQEGVQP--DIHTYTSFINACCKAGDMLRATKTME 773
Query: 513 EMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQS 567
EM AGV+ + Y +L+ + A+ P + + + + AG++ D + Y L+ S
Sbjct: 774 EMEAAGVKPNVKTYTTLIHGWANASLPEKALSCFEELKLAGLKPDKAVYHCLMTS 828
>gi|356570590|ref|XP_003553468.1| PREDICTED: uncharacterized protein LOC100786841 [Glycine max]
Length = 202
Score = 86.7 bits (213), Expect = 5e-14, Method: Composition-based stats.
Identities = 39/53 (73%), Positives = 48/53 (90%)
Query: 271 KAEQLLDIMPRIGVKADSNLLIIMAHIYERNGRREELRKLQRHIDEAVNLSDI 323
K E+LLD+MPRIGVKA +NLLII+A +YERNG REEL+KLQRHI+EA NL+D+
Sbjct: 150 KVEKLLDMMPRIGVKAVANLLIIVARVYERNGPREELKKLQRHIEEAPNLTDL 202
>gi|225428276|ref|XP_002279589.1| PREDICTED: pentatricopeptide repeat-containing protein At2g17140
[Vitis vinifera]
gi|297744485|emb|CBI37747.3| unnamed protein product [Vitis vinifera]
Length = 878
Score = 86.7 bits (213), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 138/599 (23%), Positives = 233/599 (38%), Gaps = 91/599 (15%)
Query: 115 QHMQMD---GFPRK--TLVNKILTSFVESLDSKWLEKAYGLVEQAFEEGKQILLEKEPLI 169
+ MQ+D G PR T N +L F + LE+A LVE G L+E E
Sbjct: 280 RDMQIDEELGLPRPNITTFNLMLEGFCKE---GMLEEAKTLVESMKRNGN--LMELESYN 334
Query: 170 YLSLGLSKCGLPVPASTILRKLVATEQYPPVTAWSAILAHMSLTAPGAYLAAELILEIGY 229
LGL + G + A L+++V P + +++ ++ L G A +I+ G
Sbjct: 335 IWLLGLVRNGKLLEAQLALKEMVDKGIEPNIYSFNTVMD--GLCKNGLISDARMIM--GL 390
Query: 230 LFQDGRVDPRKKCNAPLIAMKPNTNTFNIALAGCLLFETTRKAEQLLDIMPRIGVKADSN 289
+ G + P+T T++ L GC KA +L M R G ++
Sbjct: 391 MISSG--------------IGPDTVTYSTLLHGCCSTGKVLKANNILHEMMRRGCSPNTY 436
Query: 290 LLIIMAHIYERNGRREELRKLQRHIDE-AVNLSDIQFRQFYNCLLSCHLKFGDLNSASKM 348
I+ H + GR E KL + ++E + +L ++ N ++ K G L+ A ++
Sbjct: 437 TCNILLHSLWKEGRIFEAEKLLQKMNERSYDLDNVT----CNIVIDGLCKSGKLDEAVEI 492
Query: 349 VLEMLQRAKEARNSLAAAMLPFNAVGVNNRTPSEQNVNCTNSVDLENSGIIENHILSYED 408
V M A +L + + N + C DL II N +
Sbjct: 493 VEGMWIHGSAALGNLGNSFIGLVDSSSNGK-------KCL--PDLITYSIIINGLCKAGR 543
Query: 409 FTKDRKFVALEAEVKRVLQTLLGMLQKQVELITTEHGILQPTEKIYIKLVKAFLEAGKTK 468
+ RK K +E++ L P IY + +F + GK
Sbjct: 544 LDEARK--------------------KFIEMVGKS---LHPDSIIYDTFIHSFCKHGKIS 580
Query: 469 ELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQA---HDLLDEMHLAGVRASSSV 525
L EK S L +L + LG +Q + LLD+M G+ +
Sbjct: 581 SAFRVLKDMEKRGCNKS-----LQTYNSLILGLGSKNQIFEIYGLLDDMKEKGITPNICT 635
Query: 526 YASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMK 585
Y +++ E R ++ T+LL + GI + S + L+++ D + KE+
Sbjct: 636 YNNMISCLCEGGRIKDATSLLDEMLQKGISPNISSFRLLIKAFCKASD----FGVVKEVF 691
Query: 586 ESKIPRSGHQEF-------EMLVKGCAQNHEAGLMAKLLQEVKEGQRIDCGVHDWNNVIH 638
E + GH+E E+L+ G AK L + + D G +N++I
Sbjct: 692 EIALSICGHKEALYSLMFNELLIGGEVSE------AKELFDAALDRCFDLGNFQYNDLIE 745
Query: 639 FFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEMKSFAS 697
CK ++++A L +M G+ + +F ++ G G K+ + EL M AS
Sbjct: 746 KLCKDEMLENASDILHKMIDKGYRFDPASFMPVIDGLGKRGKKH-DADELAERMMDMAS 803
Score = 45.1 bits (105), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 55/270 (20%), Positives = 108/270 (40%), Gaps = 11/270 (4%)
Query: 494 VITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAG 553
+ LC S G + A ++ D+M + G R + + L++ Y A LL S G
Sbjct: 158 IAGLCDS-GRFEDAREVFDKMGVKGCRPNEFSFGILVRGYCRAGLSMRALELLDGMGSFG 216
Query: 554 IQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNH--EAG 611
+Q + Y L+ S + A L + M+E + + C+ EA
Sbjct: 217 VQPNKVIYNTLISSFCREGRNEEAERLVERMREDGLFPDVVTFNSRISALCSAGKILEAS 276
Query: 612 LMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSM 671
+ + +Q +E + +N ++ FCK+ ++++A+ ++ M+ G+L ++++
Sbjct: 277 RIFRDMQIDEELGLPRPNITTFNLMLEGFCKEGMLEEAKTLVESMKRNGNLMELESYNIW 336
Query: 672 VTGYAAIGGKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMM 731
+ G GK E EM ++ ++V+ + G + A ++ +M
Sbjct: 337 LLGLVR-NGKLLEAQLALKEMVDKGIEPNIYS----FNTVMDGLCKNGLISDARMIMGLM 391
Query: 732 EEGKMFIDKYKYRTLFLKYHKTLYKGKTPK 761
+ D Y TL H GK K
Sbjct: 392 ISSGIGPDTVTYSTLL---HGCCSTGKVLK 418
Score = 45.1 bits (105), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 54/237 (22%), Positives = 100/237 (42%), Gaps = 29/237 (12%)
Query: 525 VYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEM 584
+Y +L++ + ++ + L +D AG+ + L+ A +F +M
Sbjct: 118 LYNMVLESSLREDKVDSFSWLYKDMVVAGVSPETYTLNLLIAGLCDSGRFEDAREVFDKM 177
Query: 585 KESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRIDCGVHD----WNNVIHFF 640
K R F +LV+G + AGL + L E+ +G GV +N +I F
Sbjct: 178 G-VKGCRPNEFSFGILVRGYCR---AGLSMRAL-ELLDGMG-SFGVQPNKVIYNTLISSF 231
Query: 641 CKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEMKSFASSTS 700
C++ ++AE+ ++RMR G P+ TF+S ++ + GK E + ++ +M+
Sbjct: 232 CREGRNEEAERLVERMREDGLFPDVVTFNSRISALCS-AGKILEASRIFRDMQ------- 283
Query: 701 MNFDEEL---------LDSVLYTFVRGGFFARANEVVAMMEEGKMFIDKYKYRTLFL 748
DEEL + +L F + G A +V M+ ++ Y L
Sbjct: 284 --IDEELGLPRPNITTFNLMLEGFCKEGMLEEAKTLVESMKRNGNLMELESYNIWLL 338
>gi|168047776|ref|XP_001776345.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162672305|gb|EDQ58844.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 503
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 100/427 (23%), Positives = 189/427 (44%), Gaps = 44/427 (10%)
Query: 366 AMLP----FNAVGVNNRTPSEQNVNCTNSVDLENSGIIENHILSYEDFTKDRKF-VALEA 420
MLP F++V V N T NC N DLE + +++ YE F F V + +
Sbjct: 94 GMLPKDKQFHSVHVYN-TLITCLTNC-NRYDLE----LYHNLAFYEVFPDSVTFSVLMNS 147
Query: 421 EVKR--VLQTLLGMLQKQVELITTEHGILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAE 478
VK L+ + + Q V+ GI P+ ++ +KAF +AG+ KE LI E
Sbjct: 148 AVKGGGSLKEVWALYQDMVQ-----RGI-SPSVSVFGTFIKAFCDAGRLKE--ALLITTE 199
Query: 479 KENLQVSHDDAALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANR 538
E L V + +I +G L++A L+ EM G++ + Y +L+ Y+EA
Sbjct: 200 MEKLNVPFNVVIYNILIDAYGRVGQLEEAEGLMTEMRERGIQPNVGTYNALITGYLEAKP 259
Query: 539 PREVT---ALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQ 595
R+ L+ + ++G+ D + LL + + T A +F MK + + +
Sbjct: 260 KRQFVVAEGLIEEMEASGLYPDVVTFTMLLGAYGHEGLTEQAEQVFNRMKARGVQPNSYS 319
Query: 596 EFEMLVKGCAQNHEAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKR 655
+ L+ A+ A+ + +++ Q ++ V + ++ + + ++ + K
Sbjct: 320 -YTALINAYAERRCPEKAARAFEMIRK-QGVNPTVETYTALLDAYRRAGDLEMVQAVWKS 377
Query: 656 MRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTF 715
M+ G + T+ +++ + G+Y E +L E K+ + LL+S +
Sbjct: 378 MKVEGCVATRVTYMTILDAFQK-QGRYKEARDLIEEFKNQGHKPDLMVYNMLLNS----Y 432
Query: 716 VRGGFFARANEVVAMMEEGKMFIDKYKYRTLF------------LKYHKTLY-KGKTPKF 762
+RGG +A++++ M+ D + Y TL LKYH+ + +G+ P
Sbjct: 433 MRGGRHVKASDILLEMKTAGFLPDSFTYCTLIYGFLRVRDQTKALKYHREMMNRGQLPDP 492
Query: 763 QTEAQLK 769
+T A+L+
Sbjct: 493 KTYAKLR 499
>gi|162460542|ref|NP_001105869.1| pentatricopeptide repeat protein [Zea mays]
gi|95931777|gb|ABF57644.1| pentatricopeptide repeat protein [Zea mays]
Length = 886
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/265 (24%), Positives = 116/265 (43%), Gaps = 35/265 (13%)
Query: 447 LQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDD--------AALGHVITLC 498
LQP IY LV+AF + G + +KE +Q S+ A G +
Sbjct: 492 LQPDRAIYNLLVEAFCKMGNMDRAIRIFERMQKERMQPSNRTFRPIIEGFAVAGDMKRAF 551
Query: 499 ISLGWL-------------------------DQAHDLLDEMHLAGVRASSSVYASLLKAY 533
+L + ++A +LD+M +AG+ + Y +++ Y
Sbjct: 552 DTLDLMRRSGCAPTVMTYNALIHGLVRKHQVEKAVSVLDKMSIAGIAPNEHTYTIIMRGY 611
Query: 534 IEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSG 593
+ + + +G++LD YE LL++ AL + +EM KIPR+
Sbjct: 612 AASGDIGKAFEYFTKIKESGLKLDVYIYETLLRACCKSGRMQSALAVTREMSFQKIPRNT 671
Query: 594 HQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKAL 653
+ +L+ G A+ + A LL+++KE I +H + + I+ CK MQ AE +
Sbjct: 672 FI-YNILIDGWARRGDVWEAADLLKQMKE-DGIPPNIHTFTSYINACCKAGDMQRAENVI 729
Query: 654 KRMRSLGHLPNAQTFHSMVTGYAAI 678
+ M +G PN +TF +++ G+A +
Sbjct: 730 QEMADVGLKPNVKTFTTLIKGWARV 754
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 94/192 (48%), Gaps = 6/192 (3%)
Query: 490 ALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDA 549
+ G +I L + +G + +A + EM G++ ++ Y+ L+ +I + ++ D
Sbjct: 428 SYGCLINLYVKVGKVPKAIAISKEMESHGIKHNNKTYSMLINGFIHLHDFANAFSIFEDM 487
Query: 550 RSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHE 609
+G+Q D + Y L+++ + A+ +F+ M++ ++ S ++ F +++G A
Sbjct: 488 IKSGLQPDRAIYNLLVEAFCKMGNMDRAIRIFERMQKERMQPS-NRTFRPIIEGFAV--- 543
Query: 610 AGLMAKLLQEVKEGQRIDCG--VHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQT 667
AG M + + +R C V +N +IH +K ++ A L +M G PN T
Sbjct: 544 AGDMKRAFDTLDLMRRSGCAPTVMTYNALIHGLVRKHQVEKAVSVLDKMSIAGIAPNEHT 603
Query: 668 FHSMVTGYAAIG 679
+ ++ GYAA G
Sbjct: 604 YTIIMRGYAASG 615
Score = 62.4 bits (150), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 56/265 (21%), Positives = 115/265 (43%), Gaps = 9/265 (3%)
Query: 502 GWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCY 561
G +D+A +L+ EM G+ A VY S++ Y ++ + + G + Y
Sbjct: 370 GNMDRAEELVREMEEDGIDAPIDVYHSMMHGYTVVQDEKKCLIVFERLKECGFKPTIISY 429
Query: 562 EALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQE-V 620
L+ + P A+ + KEM+ I + ++ + ML+ G H+ + ++ +
Sbjct: 430 GCLINLYVKVGKVPKAIAISKEMESHGI-KHNNKTYSMLINGFIHLHDFANAFSIFEDMI 488
Query: 621 KEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGG 680
K G + D + +N ++ FCK M A + +RM+ P+ +TF ++ G+A G
Sbjct: 489 KSGLQPDRAI--YNLLVEAFCKMGNMDRAIRIFERMQKERMQPSNRTFRPIIEGFAVAGD 546
Query: 681 KYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFIDK 740
L +S + T M + +++++ VR +A V+ M + ++
Sbjct: 547 MKRAFDTLDLMRRSGCAPTVMTY-----NALIHGLVRKHQVEKAVSVLDKMSIAGIAPNE 601
Query: 741 YKYRTLFLKYHKTLYKGKTPKFQTE 765
+ Y + Y + GK ++ T+
Sbjct: 602 HTYTIIMRGYAASGDIGKAFEYFTK 626
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 64/135 (47%), Gaps = 2/135 (1%)
Query: 544 ALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKG 603
A + R+ GI+ +A + +L+ + V D GAL +EMK I + + +L+ G
Sbjct: 272 ATFENMRARGIEPNAFVFTSLVHAYAVAGDMRGALSCVEEMKSEGIEMT-VVTYSILISG 330
Query: 604 CAQNHEAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLP 663
+ ++A L +E K G+ ++N+IH C+ M AE+ ++ M G
Sbjct: 331 YGKTNDAQSADNLFKEAKTKLDNLNGII-YSNIIHAHCQSGNMDRAEELVREMEEDGIDA 389
Query: 664 NAQTFHSMVTGYAAI 678
+HSM+ GY +
Sbjct: 390 PIDVYHSMMHGYTVV 404
Score = 49.7 bits (117), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 43/192 (22%), Positives = 89/192 (46%), Gaps = 9/192 (4%)
Query: 506 QAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALL 565
A + M G+ ++ V+ SL+ AY A R + + + +S GI++ Y L+
Sbjct: 269 HARATFENMRARGIEPNAFVFTSLVHAYAVAGDMRGALSCVEEMKSEGIEMTVVTYSILI 328
Query: 566 QSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQR 625
D A +LFKE K +K+ + ++ Q+ +L++E++E
Sbjct: 329 SGYGKTNDAQSADNLFKEAK-TKLDNLNGIIYSNIIHAHCQSGNMDRAEELVREMEE-DG 386
Query: 626 IDCGVHDWNNVIHFFCKKRLMQDAEKAL---KRMRSLGHLPNAQTFHSMVTGYAAIGGKY 682
ID + +++++H + ++QD +K L +R++ G P ++ ++ Y + GK
Sbjct: 387 IDAPIDVYHSMMHGYT---VVQDEKKCLIVFERLKECGFKPTIISYGCLINLYVKV-GKV 442
Query: 683 TEVTELWGEMKS 694
+ + EM+S
Sbjct: 443 PKAIAISKEMES 454
Score = 44.7 bits (104), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 70/346 (20%), Positives = 145/346 (41%), Gaps = 42/346 (12%)
Query: 248 AMKPNTNTFNIALAGCLLFETTRKAEQLLDIMPRIGVKADSNLLIIMAHIYERNGRREE- 306
+K N T+++ + G + A + + M + G++ D + ++ + + G +
Sbjct: 456 GIKHNNKTYSMLINGFIHLHDFANAFSIFEDMIKSGLQPDRAIYNLLVEAFCKMGNMDRA 515
Query: 307 LRKLQRHIDEAVNLSDIQFRQFYNCLLSCHLKFGDLNSASKMVLEMLQRAKEARNSLAAA 366
+R +R E + S+ FR ++ GD+ A L++++R+ A
Sbjct: 516 IRIFERMQKERMQPSNRTFRP----IIEGFAVAGDMKRAFD-TLDLMRRS-----GCAPT 565
Query: 367 MLPFNAV--GVNNRTPSEQNVNCTNSVDLENSGIIEN-HILS---------------YED 408
++ +NA+ G+ + E+ V+ + + + +GI N H + +E
Sbjct: 566 VMTYNALIHGLVRKHQVEKAVSVLDKMSI--AGIAPNEHTYTIIMRGYAASGDIGKAFEY 623
Query: 409 FTKDRKFVALEAEVKRVLQTLLGMLQK----QVELITTEHGILQPTEK---IYIKLVKAF 461
FTK ++ L+ +V + +TLL K Q L T Q + IY L+ +
Sbjct: 624 FTKIKE-SGLKLDVY-IYETLLRACCKSGRMQSALAVTREMSFQKIPRNTFIYNILIDGW 681
Query: 462 LEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQAHDLLDEMHLAGVRA 521
G E L+K KE+ + + I C G + +A +++ EM G++
Sbjct: 682 ARRGDVWEAAD-LLKQMKED-GIPPNIHTFTSYINACCKAGDMQRAENVIQEMADVGLKP 739
Query: 522 SSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQS 567
+ + +L+K + + P + +SAG++ D + Y L+ S
Sbjct: 740 NVKTFTTLIKGWARVSLPDRALKCFEEMKSAGLKPDEAAYHCLVTS 785
>gi|242074832|ref|XP_002447352.1| hypothetical protein SORBIDRAFT_06g033480 [Sorghum bicolor]
gi|241938535|gb|EES11680.1| hypothetical protein SORBIDRAFT_06g033480 [Sorghum bicolor]
Length = 888
Score = 81.6 bits (200), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/232 (24%), Positives = 110/232 (47%), Gaps = 4/232 (1%)
Query: 447 LQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQ 506
+QP+ + + +++ F AG K L + + +I I +++
Sbjct: 529 MQPSNRTFRPIIEGFAVAGDMKRALDTLDLMRRSGCAPTV--MTYNALIHGLIRKHQVER 586
Query: 507 AHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQ 566
A +LD+M +AG+ + Y +++ Y + + + +G++LD YE LL+
Sbjct: 587 AVSVLDKMSIAGIAPNEHTYTIIMRGYAASGDIGKAFEYFTKIKESGLKLDVYIYETLLR 646
Query: 567 SKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRI 626
+ AL + +EM KIPR+ + +L+ G A+ + A L++++KE I
Sbjct: 647 ACCKSGRMQSALAVTREMSFQKIPRNTFI-YNILIDGWARRGDVWEAADLMKQMKE-DGI 704
Query: 627 DCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAI 678
+H + + I+ CK MQ AE ++ M +G PN +TF +++ G+A +
Sbjct: 705 PPNIHTFTSYINACCKAGDMQRAENVIQEMADVGLKPNVKTFTTLIKGWAKV 756
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 95/192 (49%), Gaps = 6/192 (3%)
Query: 490 ALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDA 549
+ G +I L + +G + +A + EM G++ ++ Y+ L+ +I + ++ D
Sbjct: 430 SYGCLINLYVKIGKVPKALAVSKEMESHGIKHNNKTYSMLINGFIHLHDFANAFSIFEDM 489
Query: 550 RSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHE 609
+G+Q D + Y L+++ + A+ +F+ MK+ ++ S ++ F +++G A
Sbjct: 490 IKSGLQPDRAIYNLLVEAFCKMGNMDRAIRIFERMKKERMQPS-NRTFRPIIEGFAV--- 545
Query: 610 AGLMAKLLQEVKEGQRIDCG--VHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQT 667
AG M + L + +R C V +N +IH +K ++ A L +M G PN T
Sbjct: 546 AGDMKRALDTLDLMRRSGCAPTVMTYNALIHGLIRKHQVERAVSVLDKMSIAGIAPNEHT 605
Query: 668 FHSMVTGYAAIG 679
+ ++ GYAA G
Sbjct: 606 YTIIMRGYAASG 617
Score = 66.6 bits (161), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 58/265 (21%), Positives = 117/265 (44%), Gaps = 9/265 (3%)
Query: 502 GWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCY 561
G +D+A +L+ EM G+ A VY S++ Y A ++ + + G + Y
Sbjct: 372 GNMDRAEELVREMEEDGIDAPIDVYHSMMHGYTVAQDEKKCLIVFERLKECGFRPSIISY 431
Query: 562 EALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQE-V 620
L+ + P AL + KEM+ I + ++ + ML+ G H+ + ++ +
Sbjct: 432 GCLINLYVKIGKVPKALAVSKEMESHGI-KHNNKTYSMLINGFIHLHDFANAFSIFEDMI 490
Query: 621 KEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGG 680
K G + D + +N ++ FCK M A + +RM+ P+ +TF ++ G+A G
Sbjct: 491 KSGLQPDRAI--YNLLVEAFCKMGNMDRAIRIFERMKKERMQPSNRTFRPIIEGFAVAGD 548
Query: 681 KYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFIDK 740
+ L +S + T M + +++++ +R RA V+ M + ++
Sbjct: 549 MKRALDTLDLMRRSGCAPTVMTY-----NALIHGLIRKHQVERAVSVLDKMSIAGIAPNE 603
Query: 741 YKYRTLFLKYHKTLYKGKTPKFQTE 765
+ Y + Y + GK ++ T+
Sbjct: 604 HTYTIIMRGYAASGDIGKAFEYFTK 628
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 65/132 (49%), Gaps = 2/132 (1%)
Query: 544 ALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKG 603
A + R+ GI+ +A + +L+ + V +D GAL +EMK + + + +L+ G
Sbjct: 274 ATFENMRARGIEPNAFVFTSLVHAYAVARDMRGALSCVEEMKSEGLEMT-VVTYSILIAG 332
Query: 604 CAQNHEAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLP 663
+ ++A KL +E K G+ ++N+IH C+ M AE+ ++ M G
Sbjct: 333 YGKTNDAESADKLFKEAKTKLDNLNGII-YSNIIHAHCQSGNMDRAEELVREMEEDGIDA 391
Query: 664 NAQTFHSMVTGY 675
+HSM+ GY
Sbjct: 392 PIDVYHSMMHGY 403
Score = 45.1 bits (105), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 76/374 (20%), Positives = 159/374 (42%), Gaps = 48/374 (12%)
Query: 248 AMKPNTNTFNIALAGCLLFETTRKAEQLLDIMPRIGVKADSNLLIIMAHIYERNGRREE- 306
+K N T+++ + G + A + + M + G++ D + ++ + + G +
Sbjct: 458 GIKHNNKTYSMLINGFIHLHDFANAFSIFEDMIKSGLQPDRAIYNLLVEAFCKMGNMDRA 517
Query: 307 LRKLQRHIDEAVNLSDIQFRQFYNCLLSCHLKFGDLNSASKMVLEMLQRAKEARNSLAAA 366
+R +R E + S+ FR ++ GD+ A L++++R+ A
Sbjct: 518 IRIFERMKKERMQPSNRTFRP----IIEGFAVAGDMKRALD-TLDLMRRS-----GCAPT 567
Query: 367 MLPFNAV--GVNNRTPSEQNVNCTNSVDLENSGIIEN-HILS---------------YED 408
++ +NA+ G+ + E+ V+ + + + +GI N H + +E
Sbjct: 568 VMTYNALIHGLIRKHQVERAVSVLDKMSI--AGIAPNEHTYTIIMRGYAASGDIGKAFEY 625
Query: 409 FTKDRKFVALEAEVKRVLQTLLGMLQK----QVELITTEHGILQPTEK---IYIKLVKAF 461
FTK ++ L+ +V + +TLL K Q L T Q + IY L+ +
Sbjct: 626 FTKIKE-SGLKLDVY-IYETLLRACCKSGRMQSALAVTREMSFQKIPRNTFIYNILIDGW 683
Query: 462 LEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQAHDLLDEMHLAGVRA 521
G E L+K KE+ + + I C G + +A +++ EM G++
Sbjct: 684 ARRGDVWEAAD-LMKQMKED-GIPPNIHTFTSYINACCKAGDMQRAENVIQEMADVGLKP 741
Query: 522 SSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQS-----KIVQKDT-P 575
+ + +L+K + + + P + +SAG++ D + Y L+ S +++ T
Sbjct: 742 NVKTFTTLIKGWAKVSLPDRALKCFEEMKSAGLKPDEAAYHCLVTSLLSRATVMEGSTYT 801
Query: 576 GALHLFKEMKESKI 589
G L + +EM E+ +
Sbjct: 802 GILSVCREMFENDL 815
>gi|297806463|ref|XP_002871115.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297316952|gb|EFH47374.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 942
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 113/231 (48%), Gaps = 8/231 (3%)
Query: 448 QPTEKIYIKLVKAFLEAGKTKE-LTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQ 506
+PT + ++ ++ F ++G + L F + + H AL I + +++
Sbjct: 587 RPTTRTFMPIINGFAKSGDMRRSLEVFDMMRRCGCVPTVHTFNAL---INGLVEKRQMEK 643
Query: 507 AHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQ 566
A ++LDEM LAGV A+ Y +++ Y + ++ G+++D YEALL+
Sbjct: 644 AVEILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLEVDIFTYEALLK 703
Query: 567 SKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEV-KEGQR 625
+ AL + KEM IPR+ + +L+ G A+ + A L+Q++ KEG +
Sbjct: 704 ACCKSGRMQSALAVTKEMSARNIPRNSFV-YNILIDGWARRGDVWEAADLIQQMKKEGVK 762
Query: 626 IDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYA 676
D +H + + I K M A + ++ M +LG PN +T+ +++ G+A
Sbjct: 763 PD--IHTYTSFISACSKAGDMNRATQTIEEMEALGVKPNIKTYTTLIKGWA 811
Score = 63.2 bits (152), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 52/227 (22%), Positives = 100/227 (44%), Gaps = 6/227 (2%)
Query: 454 YIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQAHDLLDE 513
Y +V F +AG + H+ +A++ + + + + G +I +++A L+ E
Sbjct: 383 YSVIVGGFSKAGNAEAADHWFDEAKR--IHKTLNASIYGKIIYAHCQTCNMERAEALVRE 440
Query: 514 MHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQKD 573
M G+ A ++Y +++ Y ++ + + + G Y L+
Sbjct: 441 MEEEGIDAPIAIYHTMMDGYTMVADEKKGLIVFKRLKECGFTPTVVTYGCLINLYTKVGK 500
Query: 574 TPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHE-AGLMAKLLQEVKEGQRIDCGVHD 632
AL + + MKE + + + + M++ G + + A A VKEG + D V
Sbjct: 501 ISKALEVSRVMKEEGV-KHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMKPD--VIL 557
Query: 633 WNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIG 679
+NN+I FC M A + +K M+ L H P +TF ++ G+A G
Sbjct: 558 YNNIIAAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIINGFAKSG 604
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/190 (23%), Positives = 88/190 (46%), Gaps = 6/190 (3%)
Query: 492 GHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARS 551
G +I L +G + +A ++ M GV+ + Y+ ++ +++ A+ D
Sbjct: 489 GCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVK 548
Query: 552 AGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAG 611
G++ D Y ++ + + A+ KEM++ + R + F ++ G A+ +G
Sbjct: 549 EGMKPDVILYNNIIAAFCGMGNMDRAIQTVKEMQKLR-HRPTTRTFMPIINGFAK---SG 604
Query: 612 LMAKLLQEVKEGQRIDC--GVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFH 669
M + L+ +R C VH +N +I+ +KR M+ A + L M G N T+
Sbjct: 605 DMRRSLEVFDMMRRCGCVPTVHTFNALINGLVEKRQMEKAVEILDEMTLAGVSANEHTYT 664
Query: 670 SMVTGYAAIG 679
++ GYA++G
Sbjct: 665 KIMQGYASVG 674
Score = 47.0 bits (110), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 32/141 (22%), Positives = 63/141 (44%), Gaps = 8/141 (5%)
Query: 453 IYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQAHDLLD 512
+Y L+ + G E + + +KE V D I+ C G +++A ++
Sbjct: 732 VYNILIDGWARRGDVWEAADLIQQMKKEG--VKPDIHTYTSFISACSKAGDMNRATQTIE 789
Query: 513 EMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQK 572
EM GV+ + Y +L+K + A+ P + + + ++ G++ D + Y LL S + +
Sbjct: 790 EMEALGVKPNIKTYTTLIKGWARASLPEKALSCYEEMKAVGLKPDKAVYHCLLTSLLSRA 849
Query: 573 DT------PGALHLFKEMKES 587
G + + KEM E+
Sbjct: 850 SIAEAYIYSGVMTICKEMVEA 870
Score = 43.9 bits (102), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 41/195 (21%), Positives = 83/195 (42%), Gaps = 10/195 (5%)
Query: 502 GWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCY 561
G + +A + + M G+ +S +Y SL+ AY E + +R + GI++ Y
Sbjct: 324 GDMHRARETFERMRARGITPTSRIYTSLIHAYAVGRDMEEALSCVRKMKEEGIEMSLVTY 383
Query: 562 EALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVK 621
++ + A H F E K + +++ C Q L++E++
Sbjct: 384 SVIVGGFSKAGNAEAADHWFDEAKRIHKTLNASIYGKIIYAHC-QTCNMERAEALVREME 442
Query: 622 EGQRIDCGVHDWNNVIHFFCKKRLMQDAEKAL---KRMRSLGHLPNAQTFHSMVTGYAAI 678
E + ID + ++ ++ + ++ D +K L KR++ G P T+ ++ Y +
Sbjct: 443 E-EGIDAPIAIYHTMMDGYT---MVADEKKGLIVFKRLKECGFTPTVVTYGCLINLYTKV 498
Query: 679 G--GKYTEVTELWGE 691
G K EV+ + E
Sbjct: 499 GKISKALEVSRVMKE 513
Score = 40.8 bits (94), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 58/311 (18%), Positives = 126/311 (40%), Gaps = 16/311 (5%)
Query: 426 LQTLLGMLQKQVEL--ITTEHGILQPTEKIYIKLVKAFLEAGKTKELTH-FLIKAEKENL 482
L T +G + K +E+ + E G+ + K Y ++ F+ K K+ + F + +
Sbjct: 494 LYTKVGKISKALEVSRVMKEEGV-KHNLKTYSMMINGFV---KLKDWANAFAVFEDMVKE 549
Query: 483 QVSHDDAALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREV 542
+ D ++I +G +D+A + EM R ++ + ++ + ++ R
Sbjct: 550 GMKPDVILYNNIIAAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIINGFAKSGDMRRS 609
Query: 543 TALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVK 602
+ R G + AL+ + ++ A+ + EM + + + H + +++
Sbjct: 610 LEVFDMMRRCGCVPTVHTFNALINGLVEKRQMEKAVEILDEMTLAGVSANEHT-YTKIMQ 668
Query: 603 GCAQNHEAGLMAKLLQEVK-EGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGH 661
G A + G + ++ EG +D + + ++ CK MQ A K M +
Sbjct: 669 GYASVGDTGKAFEYFTRLQNEGLEVD--IFTYEALLKACCKSGRMQSALAVTKEMSARNI 726
Query: 662 LPNAQTFHSMVTGYAAIGGKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFF 721
N+ ++ ++ G+A G + E +L +MK + D S + + G
Sbjct: 727 PRNSFVYNILIDGWARRGDVW-EAADLIQQMK----KEGVKPDIHTYTSFISACSKAGDM 781
Query: 722 ARANEVVAMME 732
RA + + ME
Sbjct: 782 NRATQTIEEME 792
>gi|32488707|emb|CAE03450.1| OSJNBa0088H09.8 [Oryza sativa Japonica Group]
Length = 905
Score = 80.9 bits (198), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/265 (23%), Positives = 116/265 (43%), Gaps = 35/265 (13%)
Query: 447 LQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHD------------------- 487
LQP IY L++AF + G L K +KE +Q S+
Sbjct: 509 LQPDRAIYNLLIEAFCKMGNMDRAICILEKMQKERMQPSNRAFRPIIEGYAVAGDMKSAL 568
Query: 488 --------DAALGHVITLCISLGWLDQAH------DLLDEMHLAGVRASSSVYASLLKAY 533
+ V+T + L + H +LD+M +AG+ + Y +++ Y
Sbjct: 569 DTLDLMRRSGCVPTVMTYNALIHGLVRKHKVQRAVSVLDKMSIAGITPNEHTYTIIMRGY 628
Query: 534 IEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSG 593
+ + + +G++LD YE LL++ AL + +EM KIPR+
Sbjct: 629 AASGDIGKAFEYFTKIKESGLKLDVYIYETLLRACCKSGRMQSALAVTREMSFQKIPRNT 688
Query: 594 HQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKAL 653
+ +L+ G A+ + L++++KE + +H + + I+ CK MQ AEK +
Sbjct: 689 FI-YNILIDGWARRGDVWEAEDLMKQMKEDG-VPPNIHTYTSYINACCKAGDMQRAEKVI 746
Query: 654 KRMRSLGHLPNAQTFHSMVTGYAAI 678
+ M +G PN +T+ +++ G+A +
Sbjct: 747 EEMVDVGLKPNVKTYTTLIKGWARV 771
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 57/260 (21%), Positives = 119/260 (45%), Gaps = 11/260 (4%)
Query: 490 ALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDA 549
+ G ++ L + +G + +A + EM G++ ++ Y+ L+ +I + A+ +
Sbjct: 445 SYGCLLNLYVKIGKVAKALSISKEMESCGIKHNNKTYSMLINGFIHLHDFANAFAIFEEM 504
Query: 550 RSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHE 609
+G+Q D + Y L+++ + A+ + ++M++ ++ S ++ F +++G A
Sbjct: 505 LRSGLQPDRAIYNLLIEAFCKMGNMDRAICILEKMQKERMQPS-NRAFRPIIEGYAV--- 560
Query: 610 AGLMAKLLQEVKEGQRIDC--GVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQT 667
AG M L + +R C V +N +IH +K +Q A L +M G PN T
Sbjct: 561 AGDMKSALDTLDLMRRSGCVPTVMTYNALIHGLVRKHKVQRAVSVLDKMSIAGITPNEHT 620
Query: 668 FHSMVTGYAAIGGKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEV 727
+ ++ GYAA G + E + ++K + + D + +++L + G A V
Sbjct: 621 YTIIMRGYAA-SGDIGKAFEYFTKIK----ESGLKLDVYIYETLLRACCKSGRMQSALAV 675
Query: 728 VAMMEEGKMFIDKYKYRTLF 747
M K+ + + Y L
Sbjct: 676 TREMSFQKIPRNTFIYNILI 695
Score = 44.3 bits (103), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 82/159 (51%), Gaps = 13/159 (8%)
Query: 544 ALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKG 603
A + R+ GI+ +A + +L+ + V +D GAL +EMK + + + +L+ G
Sbjct: 318 ATFENMRARGIEPNAFVFTSLVHAYAVARDMRGALSCVEEMKSEGLELT-IVTYSILISG 376
Query: 604 CAQ---NHEAGLMAKLLQEVKEGQR--IDCGVHDWNNVIHFFCKKRLMQDAEKAL---KR 655
A+ +H++G M + + V+E + ID + +++++H + ++Q+ K L +R
Sbjct: 377 FAKINDSHQSGNMERAEELVREMEEDGIDAPIDVYHSMMHGYT---IIQNENKCLVVFER 433
Query: 656 MRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEMKS 694
++ G P+ ++ ++ Y I GK + + EM+S
Sbjct: 434 LKECGFKPSIISYGCLLNLYVKI-GKVAKALSISKEMES 471
Score = 41.6 bits (96), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 77/377 (20%), Positives = 159/377 (42%), Gaps = 54/377 (14%)
Query: 248 AMKPNTNTFNIALAGCLLFETTRKAEQLLDIMPRIGVKADSNLLIIMAHIYERNGRREE- 306
+K N T+++ + G + A + + M R G++ D + ++ + + G +
Sbjct: 473 GIKHNNKTYSMLINGFIHLHDFANAFAIFEEMLRSGLQPDRAIYNLLIEAFCKMGNMDRA 532
Query: 307 ---LRKLQRHIDEAVNLSDIQFRQFYNCLLSCHLKFGDLNSASKMVLEMLQRAKEARNSL 363
L K+Q+ E + S+ FR ++ + GD+ SA L++++R+
Sbjct: 533 ICILEKMQK---ERMQPSNRAFRP----IIEGYAVAGDMKSALD-TLDLMRRS-----GC 579
Query: 364 AAAMLPFNAV--GVNNRTPSEQNVNCTNSVDLENSGIIEN-HILS--------------- 405
++ +NA+ G+ + ++ V+ + + + +GI N H +
Sbjct: 580 VPTVMTYNALIHGLVRKHKVQRAVSVLDKMSI--AGITPNEHTYTIIMRGYAASGDIGKA 637
Query: 406 YEDFTKDRKFVALEAEVKRVLQTLLGMLQK----QVELITTEHGILQPTEK---IYIKLV 458
+E FTK ++ L+ +V + +TLL K Q L T Q + IY L+
Sbjct: 638 FEYFTKIKE-SGLKLDVY-IYETLLRACCKSGRMQSALAVTREMSFQKIPRNTFIYNILI 695
Query: 459 KAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQAHDLLDEMHLAG 518
+ G E L+K KE+ V + I C G + +A +++EM G
Sbjct: 696 DGWARRGDVWEAED-LMKQMKED-GVPPNIHTYTSYINACCKAGDMQRAEKVIEEMVDVG 753
Query: 519 VRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQS-----KIVQKD 573
++ + Y +L+K + + P + + AG++ D + Y L+ S +++
Sbjct: 754 LKPNVKTYTTLIKGWARVSLPDRALKCFEEMKLAGLKPDEASYHCLVTSLLSRATVMEGS 813
Query: 574 T-PGALHLFKEMKESKI 589
T G + + +EM E+ +
Sbjct: 814 TYTGIISVCREMSENDL 830
>gi|9502388|gb|AAF88095.1|AC025417_23 T12C24.15 [Arabidopsis thaliana]
Length = 735
Score = 80.9 bits (198), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 79/307 (25%), Positives = 138/307 (44%), Gaps = 21/307 (6%)
Query: 447 LQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVIT--LCISLGWL 504
QP E Y ++K ++G+T L K E+ +++ DA +I LC G L
Sbjct: 208 FQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKL---DAVKYSIIIDGLCKD-GSL 263
Query: 505 DQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEAL 564
D A +L +EM + G +A +Y +L++ + A R + LLRD I D + AL
Sbjct: 264 DNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSAL 323
Query: 565 LQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNH--EAGLMAKLLQEVKE 622
+ + + A L KEM + I ++ C +N +A M L+ V +
Sbjct: 324 IDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLM--VSK 381
Query: 623 GQRIDCG--VHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGG 680
G CG + +N +I+ +CK L+ D + ++M G + + T+++++ G+ + G
Sbjct: 382 G----CGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCEL-G 436
Query: 681 KYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFIDK 740
K EL+ EM S + + LLD + G +A E+ +E+ KM +D
Sbjct: 437 KLEVAKELFQEMVSRRVRPDIVSYKILLDGL----CDNGEPEKALEIFEKIEKSKMELDI 492
Query: 741 YKYRTLF 747
Y +
Sbjct: 493 GIYNIII 499
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 90/451 (19%), Positives = 183/451 (40%), Gaps = 36/451 (7%)
Query: 247 IAMKPNTNTFNIALAGCLLFETTRKAEQLLDIMPRIGVKADSNLLIIMAHIYERNGR-RE 305
+ +P+T TF+ + G L +A +L+D M +G K L + + NG+ +
Sbjct: 136 LGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSD 195
Query: 306 ELRKLQRHIDEAVNLSDIQFRQFYNCLLSCHLKFGDLNSASKMVLEMLQRAKEARNSLAA 365
+ + R ++ +++ Y +L K G + + +E+L++ +E + L A
Sbjct: 196 AVLLIDRMVETGFQPNEVT----YGPVLKVMCKSG----QTALAMELLRKMEERKIKLDA 247
Query: 366 AMLPFNAVGVNNRTPSEQNVNCTNSVDLENSGIIENHILSYEDFTKDRKFVALEAEVKRV 425
G+ + N N ++++ + I+ Y + + + ++
Sbjct: 248 VKYSIIIDGLCKDGSLDNAFNLFNEMEIKG---FKADIIIYTTLIRGFCYAGRWDDGAKL 304
Query: 426 LQTLLGMLQKQVELITTEHGILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQ-- 483
L+ M+++++ P + L+ F++ GK +E KE +Q
Sbjct: 305 LRD---MIKRKI----------TPDVVAFSALIDCFVKEGKLREAEEL----HKEMIQRG 347
Query: 484 VSHDDAALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVT 543
+S D +I LD+A+ +LD M G + + L+ Y +AN +
Sbjct: 348 ISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGL 407
Query: 544 ALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKG 603
L R G+ D Y L+Q A LF+EM ++ R +++L+ G
Sbjct: 408 ELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRV-RPDIVSYKILLDG 466
Query: 604 CAQNHEAGLMAKLLQEV-KEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHL 662
N E ++ +++ K +D G+ +N +IH C + DA + G
Sbjct: 467 LCDNGEPEKALEIFEKIEKSKMELDIGI--YNIIIHGMCNASKVDDAWDLFCSLPLKGVK 524
Query: 663 PNAQTFHSMVTGYAAIGGKYTEVTELWGEMK 693
P+ +T++ M+ G G +E L+ +M+
Sbjct: 525 PDVKTYNIMIGGLCK-KGSLSEADLLFRKME 554
Score = 46.6 bits (109), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 51/218 (23%), Positives = 88/218 (40%), Gaps = 34/218 (15%)
Query: 561 YEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEV 620
Y L+S IV A+ LF+EM S+ PR +F L A+ + L+ L +++
Sbjct: 40 YRERLRSGIVDIKEDDAVDLFQEMTRSR-PRPRLIDFSRLFSVVARTKQYDLVLDLCKQM 98
Query: 621 KEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGG 680
E + I ++ + +I+ C+ R + A A+ ++ LG+ P+ TF +++ G + G
Sbjct: 99 -ELKGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLC-LEG 156
Query: 681 KYTEVTELWGEMKSFASS-------------------------------TSMNFDEELLD 709
+ +E EL M T +E
Sbjct: 157 RVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYG 216
Query: 710 SVLYTFVRGGFFARANEVVAMMEEGKMFIDKYKYRTLF 747
VL + G A A E++ MEE K+ +D KY +
Sbjct: 217 PVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIII 254
Score = 41.2 bits (95), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 52/241 (21%), Positives = 98/241 (40%), Gaps = 20/241 (8%)
Query: 497 LCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQL 556
LC+ G + +A +L+D M G + + +L+ + + L+ G Q
Sbjct: 152 LCLE-GRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQP 210
Query: 557 DASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKL 616
+ Y +L+ T A+ L ++M+E KI + ++ +++ G ++ L
Sbjct: 211 NEVTYGPVLKVMCKSGQTALAMELLRKMEERKI-KLDAVKYSIIIDGLCKDGSLDNAFNL 269
Query: 617 LQEVK-EGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGY 675
E++ +G + D + + +I FC D K L+ M P+ F +++ +
Sbjct: 270 FNEMEIKGFKADIII--YTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCF 327
Query: 676 AAIGGKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGF-----FARANEVVAM 730
GK E EL EM S D+V YT + GF +AN ++ +
Sbjct: 328 VK-EGKLREAEELHKEMIQRGISP---------DTVTYTSLIDGFCKENQLDKANHMLDL 377
Query: 731 M 731
M
Sbjct: 378 M 378
>gi|297848812|ref|XP_002892287.1| hypothetical protein ARALYDRAFT_887725 [Arabidopsis lyrata subsp.
lyrata]
gi|297338129|gb|EFH68546.1| hypothetical protein ARALYDRAFT_887725 [Arabidopsis lyrata subsp.
lyrata]
Length = 193
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 40/66 (60%), Positives = 48/66 (72%), Gaps = 2/66 (3%)
Query: 220 AAELILEIGYLFQDGRVDPRKKCNAPLIAMKPNTNTFNIALAGCLLFETTRKAEQLLDIM 279
+AEL++EIGYLF R DPRKK N PL+AMKPN + + G L T RKAEQLLDI+
Sbjct: 129 SAELVVEIGYLFHYNRADPRKKSNVPLLAMKPNNSGVEHSFGG--LSGTRRKAEQLLDIV 186
Query: 280 PRIGVK 285
P+IGVK
Sbjct: 187 PKIGVK 192
>gi|90399139|emb|CAJ86163.1| H0913C04.4 [Oryza sativa Indica Group]
gi|125550286|gb|EAY96108.1| hypothetical protein OsI_17985 [Oryza sativa Indica Group]
Length = 900
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/265 (23%), Positives = 116/265 (43%), Gaps = 35/265 (13%)
Query: 447 LQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHD------------------- 487
LQP IY L++AF + G L K +KE +Q S+
Sbjct: 504 LQPDRAIYNLLIEAFCKMGNMDRAICILEKMQKERMQPSNRAFRPIIEGYAVAGDMKSAL 563
Query: 488 --------DAALGHVITLCISLGWLDQAH------DLLDEMHLAGVRASSSVYASLLKAY 533
+ V+T + L + H +LD+M +AG+ + Y +++ Y
Sbjct: 564 DTLDLMRRSGCVPTVMTYNALIHGLVRKHKVQRAVSVLDKMSIAGITPNEHTYTIIMRGY 623
Query: 534 IEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSG 593
+ + + +G++LD YE LL++ AL + +EM KIPR+
Sbjct: 624 AASGDIGKAFEYFTKIKESGLKLDVYIYETLLRACCKSGRMQSALAVTREMSFQKIPRNT 683
Query: 594 HQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKAL 653
+ +L+ G A+ + L++++KE + +H + + I+ CK MQ AEK +
Sbjct: 684 FI-YNILIDGWARRGDVWEAEDLMKQMKE-DGVPPNIHTYTSYINACCKAGDMQRAEKVI 741
Query: 654 KRMRSLGHLPNAQTFHSMVTGYAAI 678
+ M +G PN +T+ +++ G+A +
Sbjct: 742 EEMVDVGLKPNVKTYTTLIKGWARV 766
Score = 62.8 bits (151), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 57/260 (21%), Positives = 119/260 (45%), Gaps = 11/260 (4%)
Query: 490 ALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDA 549
+ G ++ L + +G + +A + EM G++ ++ Y+ L+ +I + A+ +
Sbjct: 440 SYGCLLNLYVKIGKVAKALSISKEMESCGIKHNNKTYSMLINGFIHLHDFANAFAIFEEM 499
Query: 550 RSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHE 609
+G+Q D + Y L+++ + A+ + ++M++ ++ S ++ F +++G A
Sbjct: 500 LRSGLQPDRAIYNLLIEAFCKMGNMDRAICILEKMQKERMQPS-NRAFRPIIEGYAV--- 555
Query: 610 AGLMAKLLQEVKEGQRIDC--GVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQT 667
AG M L + +R C V +N +IH +K +Q A L +M G PN T
Sbjct: 556 AGDMKSALDTLDLMRRSGCVPTVMTYNALIHGLVRKHKVQRAVSVLDKMSIAGITPNEHT 615
Query: 668 FHSMVTGYAAIGGKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEV 727
+ ++ GYAA G + E + ++K + + D + +++L + G A V
Sbjct: 616 YTIIMRGYAA-SGDIGKAFEYFTKIK----ESGLKLDVYIYETLLRACCKSGRMQSALAV 670
Query: 728 VAMMEEGKMFIDKYKYRTLF 747
M K+ + + Y L
Sbjct: 671 TREMSFQKIPRNTFIYNILI 690
Score = 49.3 bits (116), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 73/159 (45%), Gaps = 2/159 (1%)
Query: 520 RASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALH 579
+ S + ++ Y + A + R+ GI+ +A + +L+ + V +D GAL
Sbjct: 260 KPSRREFGLMIVYYAKRGDKHHARATFENMRARGIEPNAFVFTSLVHAYAVARDMRGALS 319
Query: 580 LFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRIDCGVHDWNNVIHF 639
+EMK + + + +L+ G A+ +++ L +E K G+ ++N+IH
Sbjct: 320 CVEEMKSEGLELT-IVTYSILISGFAKINDSQSADNLFKEAKTKLSSLNGI-IYSNIIHA 377
Query: 640 FCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAI 678
C+ M+ AE+ + M G +HSM+ GY I
Sbjct: 378 HCQSGNMERAEELVCEMEEDGIDAPIDVYHSMMHGYTII 416
Score = 41.2 bits (95), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 77/377 (20%), Positives = 159/377 (42%), Gaps = 54/377 (14%)
Query: 248 AMKPNTNTFNIALAGCLLFETTRKAEQLLDIMPRIGVKADSNLLIIMAHIYERNGRREE- 306
+K N T+++ + G + A + + M R G++ D + ++ + + G +
Sbjct: 468 GIKHNNKTYSMLINGFIHLHDFANAFAIFEEMLRSGLQPDRAIYNLLIEAFCKMGNMDRA 527
Query: 307 ---LRKLQRHIDEAVNLSDIQFRQFYNCLLSCHLKFGDLNSASKMVLEMLQRAKEARNSL 363
L K+Q+ E + S+ FR ++ + GD+ SA L++++R+
Sbjct: 528 ICILEKMQK---ERMQPSNRAFRP----IIEGYAVAGDMKSALD-TLDLMRRS-----GC 574
Query: 364 AAAMLPFNAV--GVNNRTPSEQNVNCTNSVDLENSGIIEN-HILS--------------- 405
++ +NA+ G+ + ++ V+ + + + +GI N H +
Sbjct: 575 VPTVMTYNALIHGLVRKHKVQRAVSVLDKMSI--AGITPNEHTYTIIMRGYAASGDIGKA 632
Query: 406 YEDFTKDRKFVALEAEVKRVLQTLLGMLQK----QVELITTEHGILQPTEK---IYIKLV 458
+E FTK ++ L+ +V + +TLL K Q L T Q + IY L+
Sbjct: 633 FEYFTKIKE-SGLKLDVY-IYETLLRACCKSGRMQSALAVTREMSFQKIPRNTFIYNILI 690
Query: 459 KAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQAHDLLDEMHLAG 518
+ G E L+K KE+ V + I C G + +A +++EM G
Sbjct: 691 DGWARRGDVWEAED-LMKQMKED-GVPPNIHTYTSYINACCKAGDMQRAEKVIEEMVDVG 748
Query: 519 VRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQS-----KIVQKD 573
++ + Y +L+K + + P + + AG++ D + Y L+ S +++
Sbjct: 749 LKPNVKTYTTLIKGWARVSLPDRALKCFEEMKLAGLKPDEASYHCLVTSLLSRATVMEGS 808
Query: 574 T-PGALHLFKEMKESKI 589
T G + + +EM E+ +
Sbjct: 809 TYTGIISVCREMSENDL 825
>gi|125592120|gb|EAZ32470.1| hypothetical protein OsJ_16686 [Oryza sativa Japonica Group]
Length = 879
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/265 (23%), Positives = 116/265 (43%), Gaps = 35/265 (13%)
Query: 447 LQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHD------------------- 487
LQP IY L++AF + G L K +KE +Q S+
Sbjct: 483 LQPDRAIYNLLIEAFCKMGNMDRAICILEKMQKERMQPSNRAFRPIIEGYAVAGDMKSAL 542
Query: 488 --------DAALGHVITLCISLGWLDQAH------DLLDEMHLAGVRASSSVYASLLKAY 533
+ V+T + L + H +LD+M +AG+ + Y +++ Y
Sbjct: 543 DTLDLMRRSGCVPTVMTYNALIHGLVRKHKVQRAVSVLDKMSIAGITPNEHTYTIIMRGY 602
Query: 534 IEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSG 593
+ + + +G++LD YE LL++ AL + +EM KIPR+
Sbjct: 603 AASGDIGKAFEYFTKIKESGLKLDVYIYETLLRACCKSGRMQSALAVTREMSFQKIPRNT 662
Query: 594 HQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKAL 653
+ +L+ G A+ + L++++KE + +H + + I+ CK MQ AEK +
Sbjct: 663 FI-YNILIDGWARRGDVWEAEDLMKQMKEDG-VPPNIHTYTSYINACCKAGDMQRAEKVI 720
Query: 654 KRMRSLGHLPNAQTFHSMVTGYAAI 678
+ M +G PN +T+ +++ G+A +
Sbjct: 721 EEMVDVGLKPNVKTYTTLIKGWARV 745
Score = 62.8 bits (151), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 57/260 (21%), Positives = 119/260 (45%), Gaps = 11/260 (4%)
Query: 490 ALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDA 549
+ G ++ L + +G + +A + EM G++ ++ Y+ L+ +I + A+ +
Sbjct: 419 SYGCLLNLYVKIGKVAKALSISKEMESCGIKHNNKTYSMLINGFIHLHDFANAFAIFEEM 478
Query: 550 RSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHE 609
+G+Q D + Y L+++ + A+ + ++M++ ++ S ++ F +++G A
Sbjct: 479 LRSGLQPDRAIYNLLIEAFCKMGNMDRAICILEKMQKERMQPS-NRAFRPIIEGYAV--- 534
Query: 610 AGLMAKLLQEVKEGQRIDC--GVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQT 667
AG M L + +R C V +N +IH +K +Q A L +M G PN T
Sbjct: 535 AGDMKSALDTLDLMRRSGCVPTVMTYNALIHGLVRKHKVQRAVSVLDKMSIAGITPNEHT 594
Query: 668 FHSMVTGYAAIGGKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEV 727
+ ++ GYAA G + E + ++K + + D + +++L + G A V
Sbjct: 595 YTIIMRGYAA-SGDIGKAFEYFTKIK----ESGLKLDVYIYETLLRACCKSGRMQSALAV 649
Query: 728 VAMMEEGKMFIDKYKYRTLF 747
M K+ + + Y L
Sbjct: 650 TREMSFQKIPRNTFIYNILI 669
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 67/135 (49%), Gaps = 2/135 (1%)
Query: 544 ALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKG 603
A + R+ GI+ +A + +L+ + V +D GAL +EMK + + + +L+ G
Sbjct: 263 ATFENMRARGIEPNAFVFTSLVHAYAVARDMRGALSCVEEMKSEGLELT-IVTYSILISG 321
Query: 604 CAQNHEAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLP 663
A+ +++ L +E K G+ ++N+IH C+ M+ AE+ ++ M G
Sbjct: 322 FAKINDSQSADNLFKEAKTKLSSLNGII-YSNIIHAHCQSGNMERAEELVREMEEDGIDA 380
Query: 664 NAQTFHSMVTGYAAI 678
+HSM+ GY I
Sbjct: 381 PIDVYHSMMHGYTII 395
Score = 40.4 bits (93), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 77/377 (20%), Positives = 159/377 (42%), Gaps = 54/377 (14%)
Query: 248 AMKPNTNTFNIALAGCLLFETTRKAEQLLDIMPRIGVKADSNLLIIMAHIYERNGRREE- 306
+K N T+++ + G + A + + M R G++ D + ++ + + G +
Sbjct: 447 GIKHNNKTYSMLINGFIHLHDFANAFAIFEEMLRSGLQPDRAIYNLLIEAFCKMGNMDRA 506
Query: 307 ---LRKLQRHIDEAVNLSDIQFRQFYNCLLSCHLKFGDLNSASKMVLEMLQRAKEARNSL 363
L K+Q+ E + S+ FR ++ + GD+ SA L++++R+
Sbjct: 507 ICILEKMQK---ERMQPSNRAFRP----IIEGYAVAGDMKSALD-TLDLMRRS-----GC 553
Query: 364 AAAMLPFNAV--GVNNRTPSEQNVNCTNSVDLENSGIIEN-HILS--------------- 405
++ +NA+ G+ + ++ V+ + + + +GI N H +
Sbjct: 554 VPTVMTYNALIHGLVRKHKVQRAVSVLDKMSI--AGITPNEHTYTIIMRGYAASGDIGKA 611
Query: 406 YEDFTKDRKFVALEAEVKRVLQTLLGMLQK----QVELITTEHGILQPTEK---IYIKLV 458
+E FTK ++ L+ +V + +TLL K Q L T Q + IY L+
Sbjct: 612 FEYFTKIKE-SGLKLDVY-IYETLLRACCKSGRMQSALAVTREMSFQKIPRNTFIYNILI 669
Query: 459 KAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQAHDLLDEMHLAG 518
+ G E L+K KE+ V + I C G + +A +++EM G
Sbjct: 670 DGWARRGDVWEAED-LMKQMKED-GVPPNIHTYTSYINACCKAGDMQRAEKVIEEMVDVG 727
Query: 519 VRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQS-----KIVQKD 573
++ + Y +L+K + + P + + AG++ D + Y L+ S +++
Sbjct: 728 LKPNVKTYTTLIKGWARVSLPDRALKCFEEMKLAGLKPDEASYHCLVTSLLSRATVMEGS 787
Query: 574 T-PGALHLFKEMKESKI 589
T G + + +EM E+ +
Sbjct: 788 TYTGIISVCREMSENDL 804
>gi|115461420|ref|NP_001054310.1| Os04g0684500 [Oryza sativa Japonica Group]
gi|113565881|dbj|BAF16224.1| Os04g0684500 [Oryza sativa Japonica Group]
Length = 901
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/265 (23%), Positives = 116/265 (43%), Gaps = 35/265 (13%)
Query: 447 LQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHD------------------- 487
LQP IY L++AF + G L K +KE +Q S+
Sbjct: 505 LQPDRAIYNLLIEAFCKMGNMDRAICILEKMQKERMQPSNRAFRPIIEGYAVAGDMKSAL 564
Query: 488 --------DAALGHVITLCISLGWLDQAH------DLLDEMHLAGVRASSSVYASLLKAY 533
+ V+T + L + H +LD+M +AG+ + Y +++ Y
Sbjct: 565 DTLDLMRRSGCVPTVMTYNALIHGLVRKHKVQRAVSVLDKMSIAGITPNEHTYTIIMRGY 624
Query: 534 IEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSG 593
+ + + +G++LD YE LL++ AL + +EM KIPR+
Sbjct: 625 AASGDIGKAFEYFTKIKESGLKLDVYIYETLLRACCKSGRMQSALAVTREMSFQKIPRNT 684
Query: 594 HQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKAL 653
+ +L+ G A+ + L++++KE + +H + + I+ CK MQ AEK +
Sbjct: 685 FI-YNILIDGWARRGDVWEAEDLMKQMKE-DGVPPNIHTYTSYINACCKAGDMQRAEKVI 742
Query: 654 KRMRSLGHLPNAQTFHSMVTGYAAI 678
+ M +G PN +T+ +++ G+A +
Sbjct: 743 EEMVDVGLKPNVKTYTTLIKGWARV 767
Score = 62.8 bits (151), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 57/260 (21%), Positives = 119/260 (45%), Gaps = 11/260 (4%)
Query: 490 ALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDA 549
+ G ++ L + +G + +A + EM G++ ++ Y+ L+ +I + A+ +
Sbjct: 441 SYGCLLNLYVKIGKVAKALSISKEMESCGIKHNNKTYSMLINGFIHLHDFANAFAIFEEM 500
Query: 550 RSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHE 609
+G+Q D + Y L+++ + A+ + ++M++ ++ S ++ F +++G A
Sbjct: 501 LRSGLQPDRAIYNLLIEAFCKMGNMDRAICILEKMQKERMQPS-NRAFRPIIEGYAV--- 556
Query: 610 AGLMAKLLQEVKEGQRIDC--GVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQT 667
AG M L + +R C V +N +IH +K +Q A L +M G PN T
Sbjct: 557 AGDMKSALDTLDLMRRSGCVPTVMTYNALIHGLVRKHKVQRAVSVLDKMSIAGITPNEHT 616
Query: 668 FHSMVTGYAAIGGKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEV 727
+ ++ GYAA G + E + ++K + + D + +++L + G A V
Sbjct: 617 YTIIMRGYAA-SGDIGKAFEYFTKIK----ESGLKLDVYIYETLLRACCKSGRMQSALAV 671
Query: 728 VAMMEEGKMFIDKYKYRTLF 747
M K+ + + Y L
Sbjct: 672 TREMSFQKIPRNTFIYNILI 691
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 74/159 (46%), Gaps = 2/159 (1%)
Query: 520 RASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALH 579
+ S + ++ Y + A + R+ GI+ +A + +L+ + V +D GAL
Sbjct: 261 KPSRREFGLMIVYYAKRGDKHHARATFENMRARGIEPNAFVFTSLVHAYAVARDMRGALS 320
Query: 580 LFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRIDCGVHDWNNVIHF 639
+EMK + + + +L+ G A+ +++ L +E K G+ ++N+IH
Sbjct: 321 CVEEMKSEGLELT-IVTYSILISGFAKINDSQSADNLFKEAKTKLSSLNGII-YSNIIHA 378
Query: 640 FCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAI 678
C+ M+ AE+ ++ M G +HSM+ GY I
Sbjct: 379 HCQSGNMERAEELVREMEEDGIDAPIDVYHSMMHGYTII 417
Score = 40.8 bits (94), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 77/377 (20%), Positives = 159/377 (42%), Gaps = 54/377 (14%)
Query: 248 AMKPNTNTFNIALAGCLLFETTRKAEQLLDIMPRIGVKADSNLLIIMAHIYERNGRREE- 306
+K N T+++ + G + A + + M R G++ D + ++ + + G +
Sbjct: 469 GIKHNNKTYSMLINGFIHLHDFANAFAIFEEMLRSGLQPDRAIYNLLIEAFCKMGNMDRA 528
Query: 307 ---LRKLQRHIDEAVNLSDIQFRQFYNCLLSCHLKFGDLNSASKMVLEMLQRAKEARNSL 363
L K+Q+ E + S+ FR ++ + GD+ SA L++++R+
Sbjct: 529 ICILEKMQK---ERMQPSNRAFRP----IIEGYAVAGDMKSALD-TLDLMRRS-----GC 575
Query: 364 AAAMLPFNAV--GVNNRTPSEQNVNCTNSVDLENSGIIEN-HILS--------------- 405
++ +NA+ G+ + ++ V+ + + + +GI N H +
Sbjct: 576 VPTVMTYNALIHGLVRKHKVQRAVSVLDKMSI--AGITPNEHTYTIIMRGYAASGDIGKA 633
Query: 406 YEDFTKDRKFVALEAEVKRVLQTLLGMLQK----QVELITTEHGILQPTEK---IYIKLV 458
+E FTK ++ L+ +V + +TLL K Q L T Q + IY L+
Sbjct: 634 FEYFTKIKE-SGLKLDVY-IYETLLRACCKSGRMQSALAVTREMSFQKIPRNTFIYNILI 691
Query: 459 KAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQAHDLLDEMHLAG 518
+ G E L+K KE+ V + I C G + +A +++EM G
Sbjct: 692 DGWARRGDVWEAED-LMKQMKED-GVPPNIHTYTSYINACCKAGDMQRAEKVIEEMVDVG 749
Query: 519 VRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQS-----KIVQKD 573
++ + Y +L+K + + P + + AG++ D + Y L+ S +++
Sbjct: 750 LKPNVKTYTTLIKGWARVSLPDRALKCFEEMKLAGLKPDEASYHCLVTSLLSRATVMEGS 809
Query: 574 T-PGALHLFKEMKESKI 589
T G + + +EM E+ +
Sbjct: 810 TYTGIISVCREMSENDL 826
>gi|18391414|ref|NP_563911.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75167758|sp|Q9ASZ8.1|PPR37_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g12620
gi|13605505|gb|AAK32746.1|AF361578_1 At1g12620/T12C24_25 [Arabidopsis thaliana]
gi|24111307|gb|AAN46777.1| At1g12620/T12C24_25 [Arabidopsis thaliana]
gi|332190781|gb|AEE28902.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 621
Score = 80.1 bits (196), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 79/307 (25%), Positives = 138/307 (44%), Gaps = 21/307 (6%)
Query: 447 LQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVIT--LCISLGWL 504
QP E Y ++K ++G+T L K E+ +++ DA +I LC G L
Sbjct: 208 FQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKL---DAVKYSIIIDGLCKD-GSL 263
Query: 505 DQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEAL 564
D A +L +EM + G +A +Y +L++ + A R + LLRD I D + AL
Sbjct: 264 DNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSAL 323
Query: 565 LQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNH--EAGLMAKLLQEVKE 622
+ + + A L KEM + I ++ C +N +A M L+ V +
Sbjct: 324 IDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLM--VSK 381
Query: 623 GQRIDCG--VHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGG 680
G CG + +N +I+ +CK L+ D + ++M G + + T+++++ G+ + G
Sbjct: 382 G----CGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCEL-G 436
Query: 681 KYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFIDK 740
K EL+ EM S + + LLD + G +A E+ +E+ KM +D
Sbjct: 437 KLEVAKELFQEMVSRRVRPDIVSYKILLDGL----CDNGEPEKALEIFEKIEKSKMELDI 492
Query: 741 YKYRTLF 747
Y +
Sbjct: 493 GIYNIII 499
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 87/437 (19%), Positives = 176/437 (40%), Gaps = 35/437 (8%)
Query: 247 IAMKPNTNTFNIALAGCLLFETTRKAEQLLDIMPRIGVKADSNLLIIMAHIYERNGR-RE 305
+ +P+T TF+ + G L +A +L+D M +G K L + + NG+ +
Sbjct: 136 LGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSD 195
Query: 306 ELRKLQRHIDEAVNLSDIQFRQFYNCLLSCHLKFGDLNSASKMVLEMLQRAKEARNSLAA 365
+ + R ++ +++ Y +L K G + + +E+L++ +E + L A
Sbjct: 196 AVLLIDRMVETGFQPNEVT----YGPVLKVMCKSG----QTALAMELLRKMEERKIKLDA 247
Query: 366 AMLPFNAVGVNNRTPSEQNVNCTNSVDLENSGIIENHILSYEDFTKDRKFVALEAEVKRV 425
G+ + N N ++++ + I+ Y + + + ++
Sbjct: 248 VKYSIIIDGLCKDGSLDNAFNLFNEMEIKG---FKADIIIYTTLIRGFCYAGRWDDGAKL 304
Query: 426 LQTLLGMLQKQVELITTEHGILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQ-- 483
L+ M+++++ P + L+ F++ GK +E KE +Q
Sbjct: 305 LRD---MIKRKI----------TPDVVAFSALIDCFVKEGKLREAEEL----HKEMIQRG 347
Query: 484 VSHDDAALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVT 543
+S D +I LD+A+ +LD M G + + L+ Y +AN +
Sbjct: 348 ISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGL 407
Query: 544 ALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKG 603
L R G+ D Y L+Q A LF+EM ++ R +++L+ G
Sbjct: 408 ELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRV-RPDIVSYKILLDG 466
Query: 604 CAQNHEAGLMAKLLQEV-KEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHL 662
N E ++ +++ K +D G+ +N +IH C + DA + G
Sbjct: 467 LCDNGEPEKALEIFEKIEKSKMELDIGI--YNIIIHGMCNASKVDDAWDLFCSLPLKGVK 524
Query: 663 PNAQTFHSMVTGYAAIG 679
P+ +T++ M+ G G
Sbjct: 525 PDVKTYNIMIGGLCKKG 541
Score = 46.2 bits (108), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 51/218 (23%), Positives = 88/218 (40%), Gaps = 34/218 (15%)
Query: 561 YEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEV 620
Y L+S IV A+ LF+EM S+ PR +F L A+ + L+ L +++
Sbjct: 40 YRERLRSGIVDIKEDDAVDLFQEMTRSR-PRPRLIDFSRLFSVVARTKQYDLVLDLCKQM 98
Query: 621 KEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGG 680
E + I ++ + +I+ C+ R + A A+ ++ LG+ P+ TF +++ G + G
Sbjct: 99 -ELKGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLC-LEG 156
Query: 681 KYTEVTELWGEMKSFA-------------------------------SSTSMNFDEELLD 709
+ +E EL M T +E
Sbjct: 157 RVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYG 216
Query: 710 SVLYTFVRGGFFARANEVVAMMEEGKMFIDKYKYRTLF 747
VL + G A A E++ MEE K+ +D KY +
Sbjct: 217 PVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIII 254
Score = 40.4 bits (93), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 52/241 (21%), Positives = 97/241 (40%), Gaps = 20/241 (8%)
Query: 497 LCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQL 556
LC+ G + +A +L+D M G + + +L+ + + L+ G Q
Sbjct: 152 LCLE-GRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQP 210
Query: 557 DASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKL 616
+ Y +L+ T A+ L ++M+E KI + + +++ G ++ L
Sbjct: 211 NEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVK-YSIIIDGLCKDGSLDNAFNL 269
Query: 617 LQEVK-EGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGY 675
E++ +G + D + + +I FC D K L+ M P+ F +++ +
Sbjct: 270 FNEMEIKGFKAD--IIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCF 327
Query: 676 AAIGGKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGF-----FARANEVVAM 730
GK E EL EM S D+V YT + GF +AN ++ +
Sbjct: 328 VK-EGKLREAEELHKEMIQRGISP---------DTVTYTSLIDGFCKENQLDKANHMLDL 377
Query: 731 M 731
M
Sbjct: 378 M 378
>gi|297606902|ref|NP_001059180.2| Os07g0213300 [Oryza sativa Japonica Group]
gi|215767816|dbj|BAH00045.1| unnamed protein product [Oryza sativa Japonica Group]
gi|255677604|dbj|BAF21094.2| Os07g0213300 [Oryza sativa Japonica Group]
Length = 677
Score = 79.3 bits (194), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 99/499 (19%), Positives = 215/499 (43%), Gaps = 36/499 (7%)
Query: 248 AMKPNTNTFNIALAGCLLFETTRKAEQLLDIMPRIGVKAD--SNLLIIMAHIYERNGRRE 305
A+ P T+N + C +KA +L M GV D ++ +++ A +NG +
Sbjct: 76 AIPPTRTTYNNVINACGAAGNWKKALELCKKMTENGVGPDLVTHNIVLSAL---KNGAQY 132
Query: 306 ELRKLQRHIDEAVNLSDIQFRQFYNCLLSCHLKFGDLNSASKMVLEMLQRAKEARNSLAA 365
I + N++ F N ++ C +K G A +E+ +E R
Sbjct: 133 SKAISYFEIMKGANVTSDTFT--LNIIIHCLVKIGQCGEA----IELFNSMRERRTKCPP 186
Query: 366 AMLPFNAVGVNNRTPSEQNVNCTNSVDLENSGIIENHILSYEDFTKDRKFVALEAEVKRV 425
++ + ++ +++ Q NC DL + ++ +I++Y L A R
Sbjct: 187 DVVTYTSI-MHSYCIYGQVENCKAIFDLMVAEGVKPNIVAYNSL--------LGAYASR- 236
Query: 426 LQTLLGMLQKQVELIT-TEHGILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQV 484
GM ++ + + + L+P Y L+ A+ + + ++ K +K + +
Sbjct: 237 -----GMHREALAIFNLIKKNGLRPDIVSYTSLLNAYGRSAQPEKAREVFNKMKKNSCK- 290
Query: 485 SHDDAALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTA 544
+ + +I S G L +A LL EM G++ ++LL A + +
Sbjct: 291 -PNKVSYNALIDAYGSAGMLKEAVGLLHEMEKDGIQPDVVSISTLLAACGRCRQITRIET 349
Query: 545 LLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGC 604
+L ARS GI L+ Y + ++S + D AL L+ M+ES + + + +L+ G
Sbjct: 350 ILEAARSRGIDLNTVAYNSGIKSYLSFGDYEKALELYTSMRESNV-KPDAVTYNILISGS 408
Query: 605 AQNHEAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPN 664
++ + + +++ + ++ ++++I+ + K+ + +AE M+ G P+
Sbjct: 409 SKLGKYTESLRFFEDMVD-SKVSSTKEVYSSLIYSYIKQGKLSEAESTFSSMKKSGCFPD 467
Query: 665 AQTFHSMVTGYAAIGGKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARA 724
T+ +++ Y A GG + +L+ EM+ + D + S++ F +GG R
Sbjct: 468 VLTYTTLIQAYNA-GGGWKRAWDLFKEME----VNGIPPDAIICSSLMEAFNKGGEPERV 522
Query: 725 NEVVAMMEEGKMFIDKYKY 743
+++ M++ + +++ Y
Sbjct: 523 LQLMEFMKKKSIPLNQKSY 541
Score = 59.7 bits (143), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 68/294 (23%), Positives = 120/294 (40%), Gaps = 49/294 (16%)
Query: 496 TLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQ 555
+ CI G ++ + D M GV+ + Y SLL AY RE A+ + G++
Sbjct: 197 SYCI-YGQVENCKAIFDLMVAEGVKPNIVAYNSLLGAYASRGMHREALAIFNLIKKNGLR 255
Query: 556 LDASCYEALLQSKIVQKDTPGALHLFKEMKES---------------------------- 587
D Y +LL + A +F +MK++
Sbjct: 256 PDIVSYTSLLNAYGRSAQPEKAREVFNKMKKNSCKPNKVSYNALIDAYGSAGMLKEAVGL 315
Query: 588 --KIPRSGHQ----EFEMLVKGCAQNHEAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFC 641
++ + G Q L+ C + + + +L E + ID +N+ I +
Sbjct: 316 LHEMEKDGIQPDVVSISTLLAACGRCRQITRIETIL-EAARSRGIDLNTVAYNSGIKSYL 374
Query: 642 KKRLMQDAEKALK---RMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEM-KSFAS 697
D EKAL+ MR P+A T++ +++G + +G KYTE + +M S S
Sbjct: 375 S---FGDYEKALELYTSMRESNVKPDAVTYNILISGSSKLG-KYTESLRFFEDMVDSKVS 430
Query: 698 STSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFIDKYKYRTLFLKYH 751
ST +E+ S++Y++++ G + A + M++ F D Y TL Y+
Sbjct: 431 ST-----KEVYSSLIYSYIKQGKLSEAESTFSSMKKSGCFPDVLTYTTLIQAYN 479
Score = 43.1 bits (100), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 61/283 (21%), Positives = 110/283 (38%), Gaps = 10/283 (3%)
Query: 412 DRKFVALEAEVKRVLQTLLGMLQKQVELITT-EHGILQPTEKIYIKLVKAFLEAGKTKEL 470
D VA + +K L G +K +EL T+ ++P Y L+ + GK E
Sbjct: 360 DLNTVAYNSGIKSYLS--FGDYEKALELYTSMRESNVKPDAVTYNILISGSSKLGKYTES 417
Query: 471 THFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLL 530
F + + +VS +I I G L +A M +G Y +L+
Sbjct: 418 LRFF--EDMVDSKVSSTKEVYSSLIYSYIKQGKLSEAESTFSSMKKSGCFPDVLTYTTLI 475
Query: 531 KAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIP 590
+AY + L ++ GI DA +L+++ + L L + MK+ IP
Sbjct: 476 QAYNAGGGWKRAWDLFKEMEVNGIPPDAIICSSLMEAFNKGGEPERVLQLMEFMKKKSIP 535
Query: 591 RSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAE 650
+ FE ++ C + ++++ E + V N+V++F K ++
Sbjct: 536 LNQKSYFE-IIASCTMIRDWKTASEMI-EYLDSSLSSISVGTLNHVLNFLGKCGKTENMM 593
Query: 651 KALKRMRSLGHLPNAQTFHSMVTGYAAIGG--KYTEVTELWGE 691
K +M + T+ ++ +G KY EV + W E
Sbjct: 594 KLFYKMVTSCSTVGLSTYAVVLRNLLVVGKWRKYIEVLQ-WME 635
>gi|224132422|ref|XP_002328265.1| predicted protein [Populus trichocarpa]
gi|222837780|gb|EEE76145.1| predicted protein [Populus trichocarpa]
Length = 742
Score = 79.3 bits (194), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 153/676 (22%), Positives = 263/676 (38%), Gaps = 88/676 (13%)
Query: 59 QTGVLPNLNEFT-----YPTHPFSSMGGTILVQAR----DPAKL--SAEIENAINEHRYG 107
+ G PN F Y F+S G +L + R P K+ + I + E +
Sbjct: 84 EKGCEPNEYSFGILVRGYCRAGFTSKGLELLGEMRRLGFSPNKVVYNTLISSFCKEGKTD 143
Query: 108 DAWKLYEQHMQMDGF-PRKTLVNKILTSFVESLDSKWLEKAYGLVEQAFEEGKQILLEKE 166
DA KL ++ M+ DG P N +++ S K LE + + +E + L +
Sbjct: 144 DAEKLVDE-MRKDGLSPDVVTFNARISALCSS--GKVLEASRIFRDMQIDE--VLGLPQP 198
Query: 167 PLIYLSL---GLSKCGLPVPASTILRKLVATEQYPPVTAWSAILAHMSLTAPGAYLAAEL 223
+I +L G K G+ A + K+ +E +++ L + L G L A+L
Sbjct: 199 NIITYNLMLGGFCKEGMLEEARALFEKMKVSENLMNRESYNIWL--LGLVRIGKLLEAQL 256
Query: 224 ILEIGYLFQDGRVDPRKKCNAPLIAMKPNTNTFNIALAGCLLFETTRKAEQLLDIMPRIG 283
+L+ VD + M+PN ++NI + G A L+ +M G
Sbjct: 257 VLK-------EMVD---------MGMEPNVYSYNIVMDGLCKNGVLFDARMLMRLMTSSG 300
Query: 284 VKADSNLLIIMAHIYERNGRREELRKLQRHIDEAVNLSDIQFRQFYNC--LLSCHLKFGD 341
V D+ + H Y G+ E + R + + D Y C LL K G
Sbjct: 301 VLPDTVTYTTLLHGYCHTGKVSEANNVLREM-----MRDGCSPNNYTCNILLYSLWKEGR 355
Query: 342 LNSASKMVLEMLQRAKEARNSLAAAMLPFNAVGVNNRTPSEQNVNCTNSVDLENSGIIEN 401
++ A E+LQ+ E + G+ N ++ + N + S + N
Sbjct: 356 ISEAE----ELLQKMNEKGYVIDTVTCNIVIDGLCNNGKLDKAIEIVNGMWTHGSAALGN 411
Query: 402 HILSY----EDFTKDRKFVALEAEVKRVLQTL-----LGMLQKQ-VELITTEHGILQPTE 451
SY +D +K + ++ L +G +K+ +E++ LQP
Sbjct: 412 LGNSYIGLVDDSDSRKKCMPDLISYSTIISGLCKAGRVGEAKKKFIEMMGKN---LQPDS 468
Query: 452 KIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQA---H 508
IY + +F + GK L EK+ + L +L + LG +Q +
Sbjct: 469 AIYDVFIHSFCKEGKISSAFRVLKDMEKKGC-----NKTLQTYNSLIMGLGSKNQIFEIY 523
Query: 509 DLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSK 568
L+DEM GV S+Y ++L + E R ++ ++L + GI + S + L+++
Sbjct: 524 GLIDEMRERGVSPDVSIYNNVLSSLCEGGRVKDAPSVLDEMLQKGISPNISSFSILIKAF 583
Query: 569 IVQKDTPGALHLFKEMKESKIPRSGHQEF-------EMLVKGCAQNHEAGLMAKLLQEVK 621
D +F E + GH+E E+LV G + AK L E
Sbjct: 584 CKACDFSAVDEIF----EIALNVCGHKEALYSLTFNELLVGG------EVVKAKELFETA 633
Query: 622 EGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGK 681
+ D G + ++I CK + DA L ++ G+ + +F ++ G G K
Sbjct: 634 LDRSFDVGNFLYKDLIDHLCKDEKLDDASGILHKLIDKGYWFDPASFMPVIDGLGKRGNK 693
Query: 682 YTEVTELWGEMKSFAS 697
+ E EL +M AS
Sbjct: 694 H-EADELAEKMMEMAS 708
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 71/307 (23%), Positives = 130/307 (42%), Gaps = 35/307 (11%)
Query: 448 QPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQA 507
+P E + LV+ + AG T + L E L S + +I+ G D A
Sbjct: 88 EPNEYSFGILVRGYCRAGFTSKGLELL--GEMRRLGFSPNKVVYNTLISSFCKEGKTDDA 145
Query: 508 HDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDAR-------------SAGI 554
L+DEM G+ + + + A + + E + + RD + + +
Sbjct: 146 EKLVDEMRKDGLSPDVVTFNARISALCSSGKVLEASRIFRDMQIDEVLGLPQPNIITYNL 205
Query: 555 QLDASCYEALLQSKIVQKDTPGALHLFKEMK--ESKIPRSGHQEFEMLVKGCAQNHEAGL 612
L C E +L+ A LF++MK E+ + R + + + + + EA L
Sbjct: 206 MLGGFCKEGMLEE---------ARALFEKMKVSENLMNRESYNIWLLGLVRIGKLLEAQL 256
Query: 613 MAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMV 672
+ K + ++ ++ V+ +N V+ CK ++ DA ++ M S G LP+ T+ +++
Sbjct: 257 VLKEMVDMG----MEPNVYSYNIVMDGLCKNGVLFDARMLMRLMTSSGVLPDTVTYTTLL 312
Query: 673 TGYAAIGGKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMME 732
GY GK +E + EM S + N+ +L LY+ + G + A E++ M
Sbjct: 313 HGYCHT-GKVSEANNVLREMMRDGCSPN-NYTCNIL---LYSLWKEGRISEAEELLQKMN 367
Query: 733 EGKMFID 739
E ID
Sbjct: 368 EKGYVID 374
>gi|297797161|ref|XP_002866465.1| hypothetical protein ARALYDRAFT_496372 [Arabidopsis lyrata subsp.
lyrata]
gi|297312300|gb|EFH42724.1| hypothetical protein ARALYDRAFT_496372 [Arabidopsis lyrata subsp.
lyrata]
Length = 977
Score = 79.0 bits (193), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/251 (25%), Positives = 115/251 (45%), Gaps = 13/251 (5%)
Query: 447 LQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQ 506
+ P + Y L++ F ++ L++ +K N+ +S G + S G LD
Sbjct: 381 VTPGARAYASLIEGFFREKNVRKGYELLVEIKKRNIVISP--YTYGTAVKGMCSSGDLDG 438
Query: 507 AHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQ 566
A++++ EM +G R + +Y +L+K +++ +R + +L++ R GI D CY +L+
Sbjct: 439 AYNIVKEMGASGCRPNVVIYTTLIKTFLQKSRFGDAVRVLKEMREQGIAPDTFCYNSLII 498
Query: 567 SKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRI 626
K A EM E+ + + G EAG A + VKE +
Sbjct: 499 GLSKAKKMDEARSFLLEMVENGFKPDAFT-YGAFISGYI---EAGEFASADKYVKE--ML 552
Query: 627 DCGVHD----WNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKY 682
+CGV +I+ +CKK + +A A + M G L +A+T+ ++ G GK
Sbjct: 553 ECGVIPNKVLCTGLINEYCKKGKVIEACSAFRSMVEQGILGDAKTYTVLMNGLVK-NGKV 611
Query: 683 TEVTELWGEMK 693
+ E++ EM+
Sbjct: 612 NDAEEIFHEMR 622
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 59/251 (23%), Positives = 100/251 (39%), Gaps = 6/251 (2%)
Query: 443 EHGILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLG 502
E GI P Y L+ +A K E FL++ + + D G I+ I G
Sbjct: 483 EQGI-APDTFCYNSLIIGLSKAKKMDEARSFLLEMVENGFK--PDAFTYGAFISGYIEAG 539
Query: 503 WLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYE 562
A + EM GV + + L+ Y + + E + R GI DA Y
Sbjct: 540 EFASADKYVKEMLECGVIPNKVLCTGLINEYCKKGKVIEACSAFRSMVEQGILGDAKTYT 599
Query: 563 ALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKE 622
L+ + A +F EM+ I + L+ G ++ + + E+ +
Sbjct: 600 VLMNGLVKNGKVNDAEEIFHEMRGKGIAPDVFS-YGTLIDGFSKLGNMQKASSIFDEMVQ 658
Query: 623 GQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKY 682
+ V +N ++ FC+ ++ A++ L M G PNA T+ +++ GY G
Sbjct: 659 AG-LTSNVIIYNMLLGGFCRSGEIEKAKELLDEMSGKGFPPNAVTYCTIIDGYCK-SGDL 716
Query: 683 TEVTELWGEMK 693
E +L+ EMK
Sbjct: 717 AEAFQLFDEMK 727
Score = 56.6 bits (135), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 68/332 (20%), Positives = 128/332 (38%), Gaps = 49/332 (14%)
Query: 442 TEHGILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISL 501
E GIL K Y L+ ++ GK + I E ++ D + G +I L
Sbjct: 587 VEQGILGDA-KTYTVLMNGLVKNGKVNDAEE--IFHEMRGKGIAPDVFSYGTLIDGFSKL 643
Query: 502 GWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCY 561
G + +A + DEM AG+ ++ +Y LL + + + LL + G +A Y
Sbjct: 644 GNMQKASSIFDEMVQAGLTSNVIIYNMLLGGFCRSGEIEKAKELLDEMSGKGFPPNAVTY 703
Query: 562 EALLQSKIVQKDTPGALHLFKEMK-ESKIPRS------------------GHQEFEMLVK 602
++ D A LF EMK + +P S FE K
Sbjct: 704 CTIIDGYCKSGDLAEAFQLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFETNEK 763
Query: 603 GCAQNH--------------EAGLMAKLLQEVKEGQRIDCGVHD---WNNVIHFFCKKRL 645
GCA + + L ++ + +G G + +N +I + CK+
Sbjct: 764 GCASSSAPFNALINWVFKFGKTELTTDMINRLMDGSFDKFGKPNDVTYNIMIDYLCKEGN 823
Query: 646 MQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEMKSFASSTSMNFDE 705
++ A++ M+ +P T+ S++ GY + G+ +E+ ++ E+ +
Sbjct: 824 LEAAKELFHHMQKANLMPTVITYTSLLNGYDKM-GRRSEMFSVFDEVIAAGIEP------ 876
Query: 706 ELLDSVLYTFVRGGFFARANEVVAMMEEGKMF 737
D+++Y+ + F A++ +MF
Sbjct: 877 ---DNIMYSVIINAFLKEGMTTKALVLLDQMF 905
>gi|224103707|ref|XP_002313163.1| predicted protein [Populus trichocarpa]
gi|222849571|gb|EEE87118.1| predicted protein [Populus trichocarpa]
Length = 643
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/234 (23%), Positives = 106/234 (45%), Gaps = 13/234 (5%)
Query: 504 LDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEA 563
+ +A ++L EM + G S Y SL+ AY E L GI+LD Y A
Sbjct: 155 IKEAIEVLREMEVNGCSPSIVTYNSLISAYARDGLLEEAMELKNQMVERGIKLDVFTYTA 214
Query: 564 LLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEG 623
+L + A+ +F+EM+ + + F L+K + M K+ +E+K
Sbjct: 215 MLSGFVRTGKDESAMRVFEEMRTAGC-KPNICTFNALIKMHGNRGKFAEMMKVFEEIK-- 271
Query: 624 QRIDCGVHD---WNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGG 680
I C V D WN ++ F + + + K M+ +G +P T++++++ Y+ G
Sbjct: 272 --ICCCVPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRVGFVPERDTYNTLISAYSRC-G 328
Query: 681 KYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEG 734
+ + ++ M T + D ++VL RGG + ++ +++A M++G
Sbjct: 329 SFDQAMAMYKRML----DTGITPDLSTYNAVLAALARGGLWEQSEKILAEMQDG 378
Score = 42.4 bits (98), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 60/283 (21%), Positives = 105/283 (37%), Gaps = 40/283 (14%)
Query: 502 GWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCY 561
G + + EM G Y +L+ AY + A+ + GI D S Y
Sbjct: 293 GMDSEVSGVFKEMKRVGFVPERDTYNTLISAYSRCGSFDQAMAMYKRMLDTGITPDLSTY 352
Query: 562 EALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVK 621
A+L + + + EM++ + + L+ A E G M L +E+
Sbjct: 353 NAVLAALARGGLWEQSEKILAEMQDG-MCKPNELTHCSLLHAYANGKEIGRMLALAEEIC 411
Query: 622 EGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGK 681
G I+ ++ K L+ +AE+A ++ G P+ T ++M+ AI G+
Sbjct: 412 SGV-IEPHAVLLKTLVLVNSKCDLLLEAERAFLELKRKGFSPDLSTLNAMI----AIYGR 466
Query: 682 ---YTEVTELWGEMKS--------------FASSTSMNFD--EELL-------------- 708
T+ E+ MK + S S NF+ EE+L
Sbjct: 467 RQMVTKTNEILNFMKESGFTPSLATYNSLMYMHSQSENFERSEEVLKEILAKGIKPDIIS 526
Query: 709 -DSVLYTFVRGGFFARANEVVAMMEEGKMFIDKYKYRTLFLKY 750
++V++ + R G A+ + + M E + D Y T Y
Sbjct: 527 YNTVIFAYCRNGRMKEASHIFSEMRESGLIPDVITYNTFVASY 569
>gi|242065566|ref|XP_002454072.1| hypothetical protein SORBIDRAFT_04g024190 [Sorghum bicolor]
gi|241933903|gb|EES07048.1| hypothetical protein SORBIDRAFT_04g024190 [Sorghum bicolor]
Length = 820
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 85/350 (24%), Positives = 143/350 (40%), Gaps = 32/350 (9%)
Query: 412 DRKFVALEAEVKRVLQTLLGMLQKQVELITTEHGILQPTEKIYIKLVKAFLEAGKTKELT 471
DR F +L R T L ML+ + HG PT Y L++A +
Sbjct: 93 DRTFRSLLTHFSRYALTPL-MLRLFAHMY--HHGPPAPTGATYNALIRALCRRADLRHAQ 149
Query: 472 HFL---IKAEKENLQVSHDDAALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYAS 528
+L +++ + + LG+ T LD A DL D+M L G + YA+
Sbjct: 150 RYLSLMVRSGWRPDAFTFNSLILGYCRT-----QQLDVAQDLFDKMPLRGFSQDAVSYAA 204
Query: 529 LLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESK 588
L++ + E R E L R+ Q D + AL++ + L++ ++MKE
Sbjct: 205 LIEGFCETGRVDEALELFRELE----QPDMYTHAALVKGLCDARRGEEGLYMLQKMKELG 260
Query: 589 IPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQD 648
R + + LV + +A K+L E+ + + C V V++ +C++ M
Sbjct: 261 W-RPATRAYAALVDLWCREQKAEEAEKMLNEMFDNGLVPCAV-TCTAVVNAYCREGRMSG 318
Query: 649 AEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEMKSFASSTSMNFDEELL 708
A + + M+ G PN T+++MV G+ +G Y + L +M+
Sbjct: 319 AVRVFESMKLKGCEPNVWTYNAMVQGFCNVGKVY-KAMALLDQMRECGVEP--------- 368
Query: 709 DSVLYT-FVRG----GFFARANEVVAMMEEGKMFIDKYKYRTLFLKYHKT 753
D V Y +RG G A ++ +ME + D+Y Y L KT
Sbjct: 369 DVVTYNLLIRGQCIDGHIESAFRLLRLMEGNGLAADQYTYNVLIDALCKT 418
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 111/520 (21%), Positives = 206/520 (39%), Gaps = 76/520 (14%)
Query: 246 LIAMKPNTNTFNIALAGCLLFETTRKAEQLLDIMPRIGVKADS---NLLIIMAHIYERNG 302
L +PN T+N + G KA LLD M GV+ D NLLI I +G
Sbjct: 328 LKGCEPNVWTYNAMVQGFCNVGKVYKAMALLDQMRECGVEPDVVTYNLLIRGQCI---DG 384
Query: 303 RREELRKLQRHIDEAVNLSDIQFRQFYNCLLSCHLKFGDLNSASKMVLEMLQRAKEARNS 362
E +L R + E L+ Q+ YN L+ K G ++ A + + L+ NS
Sbjct: 385 HIESAFRLLRLM-EGNGLAADQYT--YNVLIDALCKTGKVDEACSL-FDGLEYRGIRPNS 440
Query: 363 LAAAMLPFNAVGVNNRTPSEQNVNCTNSVDLENSGIIENHILSYEDFTKDRKFVALEAEV 422
+ FN V + +V CT + ++G + +Y F ++ +
Sbjct: 441 VT-----FNTVINGLCKGGKFDVACTFLEKMVSAGCAPD-TYTYSPFIEN---LCKTKGS 491
Query: 423 KRVLQTLLGMLQKQVELITTEHGIL-------------------------QPTEKIYIKL 457
+ L + MLQK V+ T + I+ P Y
Sbjct: 492 REGLSFIDEMLQKDVKPSTVNYTIVIDRLFKERNYGLATRIWGQMVSLGCSPDVVTYTTS 551
Query: 458 VKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQAHDLLDEMHLA 517
V+A+ G+ E + +++ +K + V D A +I S+G D A +L H+
Sbjct: 552 VRAYCNEGRLHEAENVVMEMKKGGIIV--DAMAYNTLIDGHTSIGKTDHAVTILK--HMT 607
Query: 518 GVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQK--DTP 575
GV A+ P T + + + L++ V K +
Sbjct: 608 GV----------------ASMPNHFTFFILLRHLLQRR---LAEDVPLKTTSVWKTIELA 648
Query: 576 GALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRIDCGVHDWNN 635
LF+ MK++ +P S + + +++G ++ + L+ +KE + + +
Sbjct: 649 DVFELFELMKKNSVPSSA-RAYLAILEGFSEERRLDEVTSLVSHMKEDD-LPLNEDIYTS 706
Query: 636 VIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEMKSF 695
+++ FCK R+ DA L M G LPN ++ +++G+ A G+ E++ ++
Sbjct: 707 LVNCFCKLRMYPDAWALLCSMIGHGFLPNLISYQYLLSGFTA-EGQADRAKEIFRGLR-- 763
Query: 696 ASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGK 735
N DE + ++ +R G +++++++E+ K
Sbjct: 764 --WKEYNTDEIVWKIIIDGLIRQGHPDMCHDMISILEQMK 801
Score = 47.4 bits (111), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 49/236 (20%), Positives = 97/236 (41%), Gaps = 7/236 (2%)
Query: 448 QPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQA 507
QP + LVK +A + +E + L K ++ + + A ++ L ++A
Sbjct: 227 QPDMYTHAALVKGLCDARRGEEGLYMLQKMKELGWRPA--TRAYAALVDLWCREQKAEEA 284
Query: 508 HDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQS 567
+L+EM G+ + +++ AY R + + G + + Y A++Q
Sbjct: 285 EKMLNEMFDNGLVPCAVTCTAVVNAYCREGRMSGAVRVFESMKLKGCEPNVWTYNAMVQG 344
Query: 568 KIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKG-CAQNHEAGLMAKLLQEVKEGQRI 626
A+ L +M+E + + +L++G C H A L + EG +
Sbjct: 345 FCNVGKVYKAMALLDQMRECGV-EPDVVTYNLLIRGQCIDGHIES--AFRLLRLMEGNGL 401
Query: 627 DCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKY 682
+ +N +I CK + +A + G PN+ TF++++ G GGK+
Sbjct: 402 AADQYTYNVLIDALCKTGKVDEACSLFDGLEYRGIRPNSVTFNTVINGLCK-GGKF 456
>gi|7413543|emb|CAB86023.1| putative protein [Arabidopsis thaliana]
Length = 880
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/172 (29%), Positives = 88/172 (51%), Gaps = 4/172 (2%)
Query: 506 QAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALL 565
QA ++LDEM LAGV A+ Y +++ Y + ++ G+ +D YEALL
Sbjct: 639 QAVEILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALL 698
Query: 566 QSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEV-KEGQ 624
++ AL + KEM IPR+ + +L+ G A+ + A L+Q++ KEG
Sbjct: 699 KACCKSGRMQSALAVTKEMSARNIPRNSFV-YNILIDGWARRGDVWEAADLIQQMKKEGV 757
Query: 625 RIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYA 676
+ D +H + + I K M A + ++ M +LG PN +T+ +++ G+A
Sbjct: 758 KPD--IHTYTSFISACSKAGDMNRATQTIEEMEALGVKPNIKTYTTLIKGWA 807
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/227 (22%), Positives = 100/227 (44%), Gaps = 6/227 (2%)
Query: 454 YIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQAHDLLDE 513
Y +V F +AG + ++ +A++ + + + + G +I +++A L+ E
Sbjct: 382 YSVIVGGFSKAGHAEAADYWFDEAKR--IHKTLNASIYGKIIYAHCQTCNMERAEALVRE 439
Query: 514 MHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQKD 573
M G+ A ++Y +++ Y ++ + + + G Y L+
Sbjct: 440 MEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECGFTPTVVTYGCLINLYTKVGK 499
Query: 574 TPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHE-AGLMAKLLQEVKEGQRIDCGVHD 632
AL + + MKE + + + + M++ G + + A A VKEG + D V
Sbjct: 500 ISKALEVSRVMKEEGV-KHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMKPD--VIL 556
Query: 633 WNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIG 679
+NN+I FC M A + +K M+ L H P +TF ++ GYA G
Sbjct: 557 YNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSG 603
Score = 47.4 bits (111), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 33/141 (23%), Positives = 63/141 (44%), Gaps = 8/141 (5%)
Query: 453 IYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQAHDLLD 512
+Y L+ + G E + + +KE V D I+ C G +++A ++
Sbjct: 728 VYNILIDGWARRGDVWEAADLIQQMKKEG--VKPDIHTYTSFISACSKAGDMNRATQTIE 785
Query: 513 EMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQK 572
EM GV+ + Y +L+K + A+ P + + + ++ GI+ D + Y LL S + +
Sbjct: 786 EMEALGVKPNIKTYTTLIKGWARASLPEKALSCYEEMKAMGIKPDKAVYHCLLTSLLSRA 845
Query: 573 DT------PGALHLFKEMKES 587
G + + KEM E+
Sbjct: 846 SIAEAYIYSGVMTICKEMVEA 866
Score = 40.4 bits (93), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 40/195 (20%), Positives = 82/195 (42%), Gaps = 10/195 (5%)
Query: 502 GWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCY 561
G + +A + + M G+ +S +Y SL+ AY E + +R + GI++ Y
Sbjct: 323 GDMHRARETFERMRARGITPTSRIYTSLIHAYAVGRDMDEALSCVRKMKEEGIEMSLVTY 382
Query: 562 EALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVK 621
++ A + F E K + +++ C Q L++E++
Sbjct: 383 SVIVGGFSKAGHAEAADYWFDEAKRIHKTLNASIYGKIIYAHC-QTCNMERAEALVREME 441
Query: 622 EGQRIDCGVHDWNNVIHFFCKKRLMQDAEKAL---KRMRSLGHLPNAQTFHSMVTGYAAI 678
E + ID + ++ ++ + ++ D +K L KR++ G P T+ ++ Y +
Sbjct: 442 E-EGIDAPIAIYHTMMDGYT---MVADEKKGLVVFKRLKECGFTPTVVTYGCLINLYTKV 497
Query: 679 G--GKYTEVTELWGE 691
G K EV+ + E
Sbjct: 498 GKISKALEVSRVMKE 512
>gi|9758456|dbj|BAB08985.1| membrane-associated salt-inducible protein-like [Arabidopsis
thaliana]
Length = 949
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/172 (29%), Positives = 88/172 (51%), Gaps = 4/172 (2%)
Query: 506 QAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALL 565
QA ++LDEM LAGV A+ Y +++ Y + ++ G+ +D YEALL
Sbjct: 639 QAVEILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALL 698
Query: 566 QSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEV-KEGQ 624
++ AL + KEM IPR+ + +L+ G A+ + A L+Q++ KEG
Sbjct: 699 KACCKSGRMQSALAVTKEMSARNIPRNSFV-YNILIDGWARRGDVWEAADLIQQMKKEGV 757
Query: 625 RIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYA 676
+ D +H + + I K M A + ++ M +LG PN +T+ +++ G+A
Sbjct: 758 KPD--IHTYTSFISACSKAGDMNRATQTIEEMEALGVKPNIKTYTTLIKGWA 807
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/227 (22%), Positives = 100/227 (44%), Gaps = 6/227 (2%)
Query: 454 YIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQAHDLLDE 513
Y +V F +AG + ++ +A++ + + + + G +I +++A L+ E
Sbjct: 382 YSVIVGGFSKAGHAEAADYWFDEAKR--IHKTLNASIYGKIIYAHCQTCNMERAEALVRE 439
Query: 514 MHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQKD 573
M G+ A ++Y +++ Y ++ + + + G Y L+
Sbjct: 440 MEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECGFTPTVVTYGCLINLYTKVGK 499
Query: 574 TPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHE-AGLMAKLLQEVKEGQRIDCGVHD 632
AL + + MKE + + + + M++ G + + A A VKEG + D V
Sbjct: 500 ISKALEVSRVMKEEGV-KHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMKPD--VIL 556
Query: 633 WNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIG 679
+NN+I FC M A + +K M+ L H P +TF ++ GYA G
Sbjct: 557 YNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSG 603
Score = 47.4 bits (111), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 33/141 (23%), Positives = 63/141 (44%), Gaps = 8/141 (5%)
Query: 453 IYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQAHDLLD 512
+Y L+ + G E + + +KE V D I+ C G +++A ++
Sbjct: 728 VYNILIDGWARRGDVWEAADLIQQMKKEG--VKPDIHTYTSFISACSKAGDMNRATQTIE 785
Query: 513 EMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQK 572
EM GV+ + Y +L+K + A+ P + + + ++ GI+ D + Y LL S + +
Sbjct: 786 EMEALGVKPNIKTYTTLIKGWARASLPEKALSCYEEMKAMGIKPDKAVYHCLLTSLLSRA 845
Query: 573 DT------PGALHLFKEMKES 587
G + + KEM E+
Sbjct: 846 SIAEAYIYSGVMTICKEMVEA 866
Score = 40.0 bits (92), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 36/181 (19%), Positives = 76/181 (41%), Gaps = 8/181 (4%)
Query: 502 GWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCY 561
G + +A + + M G+ +S +Y SL+ AY E + +R + GI++ Y
Sbjct: 323 GDMHRARETFERMRARGITPTSRIYTSLIHAYAVGRDMDEALSCVRKMKEEGIEMSLVTY 382
Query: 562 EALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVK 621
++ A + F E K + +++ C Q L++E++
Sbjct: 383 SVIVGGFSKAGHAEAADYWFDEAKRIHKTLNASIYGKIIYAHC-QTCNMERAEALVREME 441
Query: 622 EGQRIDCGVHDWNNVIHFFCKKRLMQDAEKAL---KRMRSLGHLPNAQTFHSMVTGYAAI 678
E + ID + ++ ++ + ++ D +K L KR++ G P T+ ++ Y +
Sbjct: 442 E-EGIDAPIAIYHTMMDGYT---MVADEKKGLVVFKRLKECGFTPTVVTYGCLINLYTKV 497
Query: 679 G 679
G
Sbjct: 498 G 498
>gi|42567647|ref|NP_568141.2| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
thaliana]
gi|122223689|sp|Q0WMY5.1|PP365_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g04810, chloroplastic; AltName: Full=Maize PPR4
homolog; Short=AtPPR4; Flags: Precursor
gi|110739199|dbj|BAF01515.1| membrane-associated salt-inducible protein-like [Arabidopsis
thaliana]
gi|332003406|gb|AED90789.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
thaliana]
Length = 952
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 90/174 (51%), Gaps = 4/174 (2%)
Query: 504 LDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEA 563
+++A ++LDEM LAGV A+ Y +++ Y + ++ G+ +D YEA
Sbjct: 640 MEKAVEILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEA 699
Query: 564 LLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEV-KE 622
LL++ AL + KEM IPR+ + +L+ G A+ + A L+Q++ KE
Sbjct: 700 LLKACCKSGRMQSALAVTKEMSARNIPRNSFV-YNILIDGWARRGDVWEAADLIQQMKKE 758
Query: 623 GQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYA 676
G + D +H + + I K M A + ++ M +LG PN +T+ +++ G+A
Sbjct: 759 GVKPD--IHTYTSFISACSKAGDMNRATQTIEEMEALGVKPNIKTYTTLIKGWA 810
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/227 (22%), Positives = 100/227 (44%), Gaps = 6/227 (2%)
Query: 454 YIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQAHDLLDE 513
Y +V F +AG + ++ +A++ + + + + G +I +++A L+ E
Sbjct: 382 YSVIVGGFSKAGHAEAADYWFDEAKR--IHKTLNASIYGKIIYAHCQTCNMERAEALVRE 439
Query: 514 MHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQKD 573
M G+ A ++Y +++ Y ++ + + + G Y L+
Sbjct: 440 MEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECGFTPTVVTYGCLINLYTKVGK 499
Query: 574 TPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHE-AGLMAKLLQEVKEGQRIDCGVHD 632
AL + + MKE + + + + M++ G + + A A VKEG + D V
Sbjct: 500 ISKALEVSRVMKEEGV-KHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMKPD--VIL 556
Query: 633 WNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIG 679
+NN+I FC M A + +K M+ L H P +TF ++ GYA G
Sbjct: 557 YNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSG 603
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/190 (23%), Positives = 88/190 (46%), Gaps = 6/190 (3%)
Query: 492 GHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARS 551
G +I L +G + +A ++ M GV+ + Y+ ++ +++ A+ D
Sbjct: 488 GCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVK 547
Query: 552 AGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAG 611
G++ D Y ++ + + A+ KEM++ + R + F ++ G A+ +G
Sbjct: 548 EGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLR-HRPTTRTFMPIIHGYAK---SG 603
Query: 612 LMAKLLQEVKEGQRIDC--GVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFH 669
M + L+ +R C VH +N +I+ +KR M+ A + L M G N T+
Sbjct: 604 DMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYT 663
Query: 670 SMVTGYAAIG 679
++ GYA++G
Sbjct: 664 KIMQGYASVG 673
Score = 47.4 bits (111), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 33/141 (23%), Positives = 63/141 (44%), Gaps = 8/141 (5%)
Query: 453 IYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQAHDLLD 512
+Y L+ + G E + + +KE V D I+ C G +++A ++
Sbjct: 731 VYNILIDGWARRGDVWEAADLIQQMKKEG--VKPDIHTYTSFISACSKAGDMNRATQTIE 788
Query: 513 EMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQK 572
EM GV+ + Y +L+K + A+ P + + + ++ GI+ D + Y LL S + +
Sbjct: 789 EMEALGVKPNIKTYTTLIKGWARASLPEKALSCYEEMKAMGIKPDKAVYHCLLTSLLSRA 848
Query: 573 DT------PGALHLFKEMKES 587
G + + KEM E+
Sbjct: 849 SIAEAYIYSGVMTICKEMVEA 869
Score = 40.0 bits (92), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 36/181 (19%), Positives = 76/181 (41%), Gaps = 8/181 (4%)
Query: 502 GWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCY 561
G + +A + + M G+ +S +Y SL+ AY E + +R + GI++ Y
Sbjct: 323 GDMHRARETFERMRARGITPTSRIYTSLIHAYAVGRDMDEALSCVRKMKEEGIEMSLVTY 382
Query: 562 EALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVK 621
++ A + F E K + +++ C Q L++E++
Sbjct: 383 SVIVGGFSKAGHAEAADYWFDEAKRIHKTLNASIYGKIIYAHC-QTCNMERAEALVREME 441
Query: 622 EGQRIDCGVHDWNNVIHFFCKKRLMQDAEKAL---KRMRSLGHLPNAQTFHSMVTGYAAI 678
E + ID + ++ ++ + ++ D +K L KR++ G P T+ ++ Y +
Sbjct: 442 E-EGIDAPIAIYHTMMDGYT---MVADEKKGLVVFKRLKECGFTPTVVTYGCLINLYTKV 497
Query: 679 G 679
G
Sbjct: 498 G 498
>gi|15983487|gb|AAL11611.1|AF424618_1 AT5g04810/MUK11_13 [Arabidopsis thaliana]
Length = 950
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 90/174 (51%), Gaps = 4/174 (2%)
Query: 504 LDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEA 563
+++A ++LDEM LAGV A+ Y +++ Y + ++ G+ +D YEA
Sbjct: 638 MEKAVEILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEA 697
Query: 564 LLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEV-KE 622
LL++ AL + KEM IPR+ + +L+ G A+ + A L+Q++ KE
Sbjct: 698 LLKACCKSGRMQSALAVTKEMSARNIPRNSFV-YNILIDGWARRGDVWEAADLIQQMKKE 756
Query: 623 GQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYA 676
G + D +H + + I K M A + ++ M +LG PN +T+ +++ G+A
Sbjct: 757 GVKPD--IHTYTSFISACSKAGDMNRATQTIEEMEALGVKPNIKTYTTLIKGWA 808
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/227 (22%), Positives = 100/227 (44%), Gaps = 6/227 (2%)
Query: 454 YIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQAHDLLDE 513
Y +V F +AG + ++ +A++ + + + + G +I +++A L+ E
Sbjct: 380 YSVIVGGFSKAGHAEAADYWFDEAKR--IHKTLNASIYGKIIYAHCQTCNMERAEALVRE 437
Query: 514 MHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQKD 573
M G+ A ++Y +++ Y ++ + + + G Y L+
Sbjct: 438 MEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECGFTPTVVTYGCLINLYTKVGK 497
Query: 574 TPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHE-AGLMAKLLQEVKEGQRIDCGVHD 632
AL + + MKE + + + + M++ G + + A A VKEG + D V
Sbjct: 498 ISKALEVSRVMKEEGV-KHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMKPD--VIL 554
Query: 633 WNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIG 679
+NN+I FC M A + +K M+ L H P +TF ++ GYA G
Sbjct: 555 YNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSG 601
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/190 (23%), Positives = 88/190 (46%), Gaps = 6/190 (3%)
Query: 492 GHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARS 551
G +I L +G + +A ++ M GV+ + Y+ ++ +++ A+ D
Sbjct: 486 GCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVK 545
Query: 552 AGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAG 611
G++ D Y ++ + + A+ KEM++ + R + F ++ G A+ +G
Sbjct: 546 EGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLR-HRPTTRTFMPIIHGYAK---SG 601
Query: 612 LMAKLLQEVKEGQRIDC--GVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFH 669
M + L+ +R C VH +N +I+ +KR M+ A + L M G N T+
Sbjct: 602 DMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYT 661
Query: 670 SMVTGYAAIG 679
++ GYA++G
Sbjct: 662 KIMQGYASVG 671
Score = 47.8 bits (112), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 33/141 (23%), Positives = 63/141 (44%), Gaps = 8/141 (5%)
Query: 453 IYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQAHDLLD 512
+Y L+ + G E + + +KE V D I+ C G +++A ++
Sbjct: 729 VYNILIDGWARRGDVWEAADLIQQMKKEG--VKPDIHTYTSFISACSKAGDMNRATQTIE 786
Query: 513 EMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQK 572
EM GV+ + Y +L+K + A+ P + + + ++ GI+ D + Y LL S + +
Sbjct: 787 EMEALGVKPNIKTYTTLIKGWARASLPEKALSCYEEMKAMGIKPDKAVYHCLLTSLLSRA 846
Query: 573 DT------PGALHLFKEMKES 587
G + + KEM E+
Sbjct: 847 SIAEAYIYSGVMTICKEMVEA 867
Score = 40.0 bits (92), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 36/181 (19%), Positives = 76/181 (41%), Gaps = 8/181 (4%)
Query: 502 GWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCY 561
G + +A + + M G+ +S +Y SL+ AY E + +R + GI++ Y
Sbjct: 321 GDMHRARETFERMRARGITPTSRIYTSLIHAYAVGRDMDEALSCVRKMKEEGIEMSLVTY 380
Query: 562 EALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVK 621
++ A + F E K + +++ C Q L++E++
Sbjct: 381 SVIVGGFSKAGHAEAADYWFDEAKRIHKTLNASIYGKIIYAHC-QTCNMERAEALVREME 439
Query: 622 EGQRIDCGVHDWNNVIHFFCKKRLMQDAEKAL---KRMRSLGHLPNAQTFHSMVTGYAAI 678
E + ID + ++ ++ + ++ D +K L KR++ G P T+ ++ Y +
Sbjct: 440 E-EGIDAPIAIYHTMMDGYT---MVADEKKGLVVFKRLKECGFTPTVVTYGCLINLYTKV 495
Query: 679 G 679
G
Sbjct: 496 G 496
>gi|357166784|ref|XP_003580849.1| PREDICTED: pentatricopeptide repeat-containing protein At5g04810,
chloroplastic-like [Brachypodium distachyon]
Length = 904
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/265 (24%), Positives = 115/265 (43%), Gaps = 39/265 (14%)
Query: 447 LQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQ 506
LQP IY L++AF + G L K +KE +Q S + A +I G + +
Sbjct: 510 LQPDRAIYNLLIEAFCKMGNMDRAIRILEKMQKERMQPS--NRAFRPIIEGFAVAGDMKR 567
Query: 507 AHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGI------------ 554
A ++LD M +G + Y +L+ I+ N+ ++L AGI
Sbjct: 568 ALNILDLMRRSGCAPTVMTYNALIHGLIKKNQVERAVSVLNKMSIAGITPNEHTYTIIMR 627
Query: 555 -----------------------QLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPR 591
+LD YE LL++ AL + +EM KI R
Sbjct: 628 GYAANGDIGKAFEYFTKIKEGGLKLDVYIYETLLRACCKSGRMQSALAVTREMSTQKIAR 687
Query: 592 SGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEK 651
+ + +L+ G A+ + A L++++KE + +H + + I+ CK MQ A+K
Sbjct: 688 NTFV-YNILIDGWARRGDVWEAADLMKQMKE-DGVPPNIHTYTSYINACCKAGDMQRAQK 745
Query: 652 ALKRMRSLGHLPNAQTFHSMVTGYA 676
++ M +G PN +T+ +++ G+A
Sbjct: 746 VIEEMADVGLKPNLKTYTTLIKGWA 770
Score = 63.9 bits (154), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/260 (22%), Positives = 119/260 (45%), Gaps = 11/260 (4%)
Query: 490 ALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDA 549
+ G +I L I +G + +A + EM G++ ++ Y+ L+ +I + ++ +
Sbjct: 446 SYGCLINLYIKIGKVTKAIAISKEMESYGIKHNNKTYSMLISGFIHLHDFANAFSIFEEM 505
Query: 550 RSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHE 609
+G+Q D + Y L+++ + A+ + ++M++ ++ S ++ F +++G A
Sbjct: 506 LKSGLQPDRAIYNLLIEAFCKMGNMDRAIRILEKMQKERMQPS-NRAFRPIIEGFAV--- 561
Query: 610 AGLMAKLLQEVKEGQRIDCG--VHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQT 667
AG M + L + +R C V +N +IH KK ++ A L +M G PN T
Sbjct: 562 AGDMKRALNILDLMRRSGCAPTVMTYNALIHGLIKKNQVERAVSVLNKMSIAGITPNEHT 621
Query: 668 FHSMVTGYAAIGGKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEV 727
+ ++ GYAA G + E + ++K + D + +++L + G A V
Sbjct: 622 YTIIMRGYAA-NGDIGKAFEYFTKIK----EGGLKLDVYIYETLLRACCKSGRMQSALAV 676
Query: 728 VAMMEEGKMFIDKYKYRTLF 747
M K+ + + Y L
Sbjct: 677 TREMSTQKIARNTFVYNILI 696
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 56/265 (21%), Positives = 116/265 (43%), Gaps = 13/265 (4%)
Query: 491 LGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDAR 550
G +I G A + M G+ ++ V+ SL+ AY A R V + + + +
Sbjct: 272 FGLMIVYYAKRGDKHHARATFENMRARGIEPNAFVFTSLVHAYAVARDMRGVLSCVEEMK 331
Query: 551 SAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEA 610
+ GI+L Y ++ D A +LFKE K +K+ + ++ Q+
Sbjct: 332 AEGIELTIVTYSIIIAGFAKINDAQSADNLFKEAK-AKLGDLNGIIYSNIIHAHCQSGNM 390
Query: 611 GLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKAL---KRMRSLGHLPNAQT 667
+L++E++E ID + +++++H + ++QD +K L +R++ P+ +
Sbjct: 391 DRAEELVREMEE-DGIDAPIDAYHSMMHGYT---IIQDEKKCLIVFERLKECCFTPSIIS 446
Query: 668 FHSMVTGYAAIGGKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEV 727
+ ++ Y I GK T+ + EM+S+ + + + ++ F+ FA A +
Sbjct: 447 YGCLINLYIKI-GKVTKAIAISKEMESYG----IKHNNKTYSMLISGFIHLHDFANAFSI 501
Query: 728 VAMMEEGKMFIDKYKYRTLFLKYHK 752
M + + D+ Y L + K
Sbjct: 502 FEEMLKSGLQPDRAIYNLLIEAFCK 526
Score = 45.4 bits (106), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 78/374 (20%), Positives = 162/374 (43%), Gaps = 48/374 (12%)
Query: 248 AMKPNTNTFNIALAGCLLFETTRKAEQLLDIMPRIGVKADSNLLIIMAHIYERNGRREE- 306
+K N T+++ ++G + A + + M + G++ D + ++ + + G +
Sbjct: 474 GIKHNNKTYSMLISGFIHLHDFANAFSIFEEMLKSGLQPDRAIYNLLIEAFCKMGNMDRA 533
Query: 307 LRKLQRHIDEAVNLSDIQFRQFYNCLLSCHLKFGDLNSASKMVLEMLQRAKEARNSLAAA 366
+R L++ E + S+ FR ++ GD+ A +L++++R+ A
Sbjct: 534 IRILEKMQKERMQPSNRAFRP----IIEGFAVAGDMKRALN-ILDLMRRS-----GCAPT 583
Query: 367 MLPFNAV--GVNNRTPSEQNVNCTNSVDLENSGIIEN-HILS---------------YED 408
++ +NA+ G+ + E+ V+ N + + +GI N H + +E
Sbjct: 584 VMTYNALIHGLIKKNQVERAVSVLNKMSI--AGITPNEHTYTIIMRGYAANGDIGKAFEY 641
Query: 409 FTKDRKFVALEAEVKRVLQTLLGMLQK----QVELITTEHGILQPTEK---IYIKLVKAF 461
FTK ++ L+ +V + +TLL K Q L T Q + +Y L+ +
Sbjct: 642 FTKIKEG-GLKLDVY-IYETLLRACCKSGRMQSALAVTREMSTQKIARNTFVYNILIDGW 699
Query: 462 LEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQAHDLLDEMHLAGVRA 521
G E L+K KE+ V + I C G + +A +++EM G++
Sbjct: 700 ARRGDVWEAAD-LMKQMKED-GVPPNIHTYTSYINACCKAGDMQRAQKVIEEMADVGLKP 757
Query: 522 SSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQS-----KIVQKDT-P 575
+ Y +L+K + +A+ P + + AG++ D + Y L+ S +++ T
Sbjct: 758 NLKTYTTLIKGWAKASLPDRALKSFEEMKLAGLKPDEAAYHCLVTSLLSRATVMEGSTYT 817
Query: 576 GALHLFKEMKESKI 589
G L + +EM E+ +
Sbjct: 818 GILSICREMFENDL 831
>gi|413937324|gb|AFW71875.1| hypothetical protein ZEAMMB73_225396 [Zea mays]
Length = 818
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/302 (21%), Positives = 128/302 (42%), Gaps = 14/302 (4%)
Query: 444 HGILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGW 503
HG +P Y ++K+ + + KE+ L AE + + D+ ++T G
Sbjct: 350 HGC-KPDAVTYTPVLKSLCGSERWKEVEELL--AEMTSNNCAPDEVTFNTIVTSLCQQGL 406
Query: 504 LDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEA 563
+D+A +++D M G A Y+S+L + R + LL +S G + D Y
Sbjct: 407 VDRAIEVVDHMSEHGCVADIVTYSSILDGLCDVGRVDDAVELLSRLKSYGCKPDTIAYTT 466
Query: 564 LLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEG 623
+L+ + A L EM S P F +V Q GL+ + ++ V++
Sbjct: 467 VLKGLCSTEQWERAEELMAEMLCSDCP-PDEVTFNTVVASLCQK---GLVDRAIRVVEQM 522
Query: 624 QRIDCG--VHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGK 681
C + +N +I C + + DA + L ++S G P+ TF++++ G + +
Sbjct: 523 SENGCSPDIVTYNCIIDGLCNESCIDDAMELLSDLQSCGCKPDIVTFNTLLKGLCGV-DR 581
Query: 682 YTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFIDKY 741
+ + +L M ++ DE ++V+ + + G +A E + +M E +
Sbjct: 582 WEDAEQLMANMM----RSNCPPDELTFNTVITSLCQKGLLTQAIETLKIMAENGCVPNSS 637
Query: 742 KY 743
Y
Sbjct: 638 TY 639
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 66/315 (20%), Positives = 129/315 (40%), Gaps = 38/315 (12%)
Query: 447 LQPTEKI--YIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVI-TLCISLGW 503
L P+ + Y +V + AG+ ++ + + D +I LC+ G
Sbjct: 213 LGPSATVVTYNTMVNGYCRAGRIEDARRLI-----NGMPFPPDTFTFNPLIRALCVR-GR 266
Query: 504 LDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEA 563
+ A + D+M G S Y+ LL A + + R+ ALL + R+ G + D Y
Sbjct: 267 IPDALAVFDDMLHRGCSPSVVTYSILLDATCKESGYRQAMALLDEMRAKGCEPDIVTYNV 326
Query: 564 LLQSKIVQKDTPGALHLFKEMKESKIPRSGHQE----FEMLVKGCAQNHEAGLMAKLLQE 619
L+ + + D AL++ S +P G + + ++K + + +LL E
Sbjct: 327 LINAMCNEGDVDEALNIL-----SNLPSHGCKPDAVTYTPVLKSLCGSERWKEVEELLAE 381
Query: 620 VKEGQRIDCGVHD--WNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAA 677
+ +C + +N ++ C++ L+ A + + M G + + T+ S++ G
Sbjct: 382 MTSN---NCAPDEVTFNTIVTSLCQQGLVDRAIEVVDHMSEHGCVADIVTYSSILDGLCD 438
Query: 678 IGGKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFA-----RANEVVAMME 732
+ G+ + EL +KS+ D++ YT V G + RA E++A M
Sbjct: 439 V-GRVDDAVELLSRLKSYGCKP---------DTIAYTTVLKGLCSTEQWERAEELMAEML 488
Query: 733 EGKMFIDKYKYRTLF 747
D+ + T+
Sbjct: 489 CSDCPPDEVTFNTVV 503
>gi|326528911|dbj|BAJ97477.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 913
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/265 (24%), Positives = 112/265 (42%), Gaps = 39/265 (14%)
Query: 447 LQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQ 506
LQP IY L++AF + G L K +KE +Q S + A +I G + +
Sbjct: 518 LQPDRAIYNLLIEAFCKMGNMDRAIRILEKMQKERMQPS--NRAFRPIIEGFAVAGDMKR 575
Query: 507 AHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGI------------ 554
A D+LD M +G + Y +L+ I N+ ++L AGI
Sbjct: 576 ALDILDLMRRSGCAPTVMTYNALIHGLIRKNQVERAVSVLNKMSIAGITPNEHTYTIIMR 635
Query: 555 -----------------------QLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPR 591
+LD YE LL++ AL + +EM KI R
Sbjct: 636 GYAATGDIAKAFEYFTKIKEGGLKLDVYIYETLLRACCKSGRMQSALAVTREMSSQKIAR 695
Query: 592 SGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEK 651
+ + +L+ G A+ + A L++++KE + +H + + I+ CK MQ A+
Sbjct: 696 NTFV-YNILIDGWARRGDVWEAADLMKQMKE-DGVPPNIHTYTSYINACCKAGDMQRAQT 753
Query: 652 ALKRMRSLGHLPNAQTFHSMVTGYA 676
+ M +G PN +T+ +++ G+A
Sbjct: 754 VIDEMSDVGLKPNLKTYTTLIKGWA 778
Score = 63.2 bits (152), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 56/260 (21%), Positives = 119/260 (45%), Gaps = 11/260 (4%)
Query: 490 ALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDA 549
+ G +I L + +G + +A + EM +G++ ++ Y+ L+ +I + + +
Sbjct: 454 SYGCLINLYVKIGKVAKAIAISKEMESSGIKHNNKTYSMLISGFIHLHDFTNAFRIFEEM 513
Query: 550 RSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHE 609
+G+Q D + Y L+++ + A+ + ++M++ ++ S ++ F +++G A
Sbjct: 514 LKSGLQPDRAIYNLLIEAFCKMGNMDRAIRILEKMQKERMQPS-NRAFRPIIEGFAV--- 569
Query: 610 AGLMAKLLQEVKEGQRIDCG--VHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQT 667
AG M + L + +R C V +N +IH +K ++ A L +M G PN T
Sbjct: 570 AGDMKRALDILDLMRRSGCAPTVMTYNALIHGLIRKNQVERAVSVLNKMSIAGITPNEHT 629
Query: 668 FHSMVTGYAAIGGKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEV 727
+ ++ GYAA G + E + ++K + D + +++L + G A V
Sbjct: 630 YTIIMRGYAAT-GDIAKAFEYFTKIK----EGGLKLDVYIYETLLRACCKSGRMQSALAV 684
Query: 728 VAMMEEGKMFIDKYKYRTLF 747
M K+ + + Y L
Sbjct: 685 TREMSSQKIARNTFVYNILI 704
Score = 48.9 bits (115), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 76/371 (20%), Positives = 158/371 (42%), Gaps = 42/371 (11%)
Query: 248 AMKPNTNTFNIALAGCLLFETTRKAEQLLDIMPRIGVKADSNLLIIMAHIYERNGRREE- 306
+K N T+++ ++G + A ++ + M + G++ D + ++ + + G +
Sbjct: 482 GIKHNNKTYSMLISGFIHLHDFTNAFRIFEEMLKSGLQPDRAIYNLLIEAFCKMGNMDRA 541
Query: 307 LRKLQRHIDEAVNLSDIQFRQFYNCLLSCHLKFGDLNSASKMVLEMLQRAKEA------- 359
+R L++ E + S+ FR ++ GD+ A +L++++R+ A
Sbjct: 542 IRILEKMQKERMQPSNRAFRP----IIEGFAVAGDMKRALD-ILDLMRRSGCAPTVMTYN 596
Query: 360 --------RNSLAAAMLPFNAVGVNNRTPSEQNVNCTNSVDLENSGIIENHILSYEDFTK 411
+N + A+ N + + TP+E T ++ + + ++E FTK
Sbjct: 597 ALIHGLIRKNQVERAVSVLNKMSIAGITPNEH----TYTIIMRGYAATGDIAKAFEYFTK 652
Query: 412 DRKFVALEAEVKRVLQTLLGMLQK----QVELITTEHGILQPTEK---IYIKLVKAFLEA 464
++ L+ +V + +TLL K Q L T Q + +Y L+ +
Sbjct: 653 IKE-GGLKLDVY-IYETLLRACCKSGRMQSALAVTREMSSQKIARNTFVYNILIDGWARR 710
Query: 465 GKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSS 524
G E L+K KE+ V + I C G + +A ++DEM G++ +
Sbjct: 711 GDVWEAAD-LMKQMKED-GVPPNIHTYTSYINACCKAGDMQRAQTVIDEMSDVGLKPNLK 768
Query: 525 VYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQS-----KIVQKDT-PGAL 578
Y +L+K + A+ P + + AG++ D + Y L+ S +++ T G L
Sbjct: 769 TYTTLIKGWARASLPDRALKCFEEMKLAGLKPDEAAYHCLVTSLLSRATVMEGSTYTGIL 828
Query: 579 HLFKEMKESKI 589
+ +EM E+ +
Sbjct: 829 SVCREMFENDL 839
Score = 47.8 bits (112), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 70/159 (44%), Gaps = 2/159 (1%)
Query: 520 RASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALH 579
+ S + ++ Y + A + R+ GI+ +A + +L+ + V +D GAL
Sbjct: 274 KPSRREFGLMIVYYAKRGDKHHARATFENMRARGIEPNAFVFTSLVHAYAVARDMRGALS 333
Query: 580 LFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRIDCGVHDWNNVIHF 639
+EMK I + + +L+ G + ++ L +E K G+ ++N+IH
Sbjct: 334 CTEEMKAEGIELT-IVTYSILISGFGKINDTQSADNLFKEAKTNLGDLNGII-YSNIIHA 391
Query: 640 FCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAI 678
C+ M AE+ + M G +HSM+ GY I
Sbjct: 392 HCQSGNMDRAEELVHEMEEDGIDAPIDAYHSMMHGYTII 430
Score = 45.8 bits (107), Expect = 0.100, Method: Compositional matrix adjust.
Identities = 47/207 (22%), Positives = 92/207 (44%), Gaps = 9/207 (4%)
Query: 491 LGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDAR 550
G +I G A + M G+ ++ V+ SL+ AY A R + + +
Sbjct: 280 FGLMIVYYAKRGDKHHARATFENMRARGIEPNAFVFTSLVHAYAVARDMRGALSCTEEMK 339
Query: 551 SAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEA 610
+ GI+L Y L+ DT A +LFKE K + +G + ++ Q+
Sbjct: 340 AEGIELTIVTYSILISGFGKINDTQSADNLFKEAKTNLGDLNG-IIYSNIIHAHCQSGNM 398
Query: 611 GLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKAL---KRMRSLGHLPNAQT 667
+L+ E++E ID + +++++H + ++QD +K L +R++ P+ +
Sbjct: 399 DRAEELVHEMEE-DGIDAPIDAYHSMMHGYT---IIQDEKKCLIVFERLKECCFTPSIIS 454
Query: 668 FHSMVTGYAAIGGKYTEVTELWGEMKS 694
+ ++ Y I GK + + EM+S
Sbjct: 455 YGCLINLYVKI-GKVAKAIAISKEMES 480
>gi|79317869|ref|NP_001031033.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75178969|sp|Q9LPX2.1|PPR39_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g12775, mitochondrial; Flags: Precursor
gi|8698724|gb|AAF78482.1|AC012187_2 Contains similarity to an unknown protein F16M19.7 gi|6598837 from
Arabidopsis thaliana BAC F16M19 gb|AC010795 and contains
multiple PPR PF|01535 repeats. EST gb|AI999079 comes
from this gene [Arabidopsis thaliana]
gi|332190806|gb|AEE28927.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 644
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 78/298 (26%), Positives = 132/298 (44%), Gaps = 19/298 (6%)
Query: 447 LQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVIT--LCISLGWL 504
QP E Y ++ ++G+T L K E+ N+++ DA +I LC G L
Sbjct: 224 FQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKL---DAVKYSIIIDGLCKD-GSL 279
Query: 505 DQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEAL 564
D A +L +EM + G +A Y +L+ + A R + LLRD I + + L
Sbjct: 280 DNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVL 339
Query: 565 LQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKG-CAQNH--EAGLMAKLLQEVK 621
+ S + + A L KEM + I + L+ G C +N EA M L+ +
Sbjct: 340 IDSFVKEGKLREADQLLKEMMQRGIA-PNTITYNSLIDGFCKENRLEEAIQMVDLM--IS 396
Query: 622 EGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGK 681
+G D + +N +I+ +CK + D + + M G + N T++++V G+ GK
Sbjct: 397 KG--CDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQ-SGK 453
Query: 682 YTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFID 739
+L+ EM S + + LLD + G +A E+ +E+ KM +D
Sbjct: 454 LEVAKKLFQEMVSRRVRPDIVSYKILLDGL----CDNGELEKALEIFGKIEKSKMELD 507
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 84/180 (46%), Gaps = 3/180 (1%)
Query: 497 LCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQL 556
LC++ G + A L+D M G + + Y +L ++ + LLR I+L
Sbjct: 203 LCLN-GKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKL 261
Query: 557 DASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKL 616
DA Y ++ A +LF EM E K ++ + L+ G AKL
Sbjct: 262 DAVKYSIIIDGLCKDGSLDNAFNLFNEM-EIKGFKADIITYNTLIGGFCNAGRWDDGAKL 320
Query: 617 LQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYA 676
L+++ + ++I V ++ +I F K+ +++A++ LK M G PN T++S++ G+
Sbjct: 321 LRDMIK-RKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFC 379
Score = 49.7 bits (117), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 42/192 (21%), Positives = 87/192 (45%), Gaps = 5/192 (2%)
Query: 504 LDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEA 563
+D +L EM L GV A++ Y +L++ + ++ + L ++ S ++ D Y+
Sbjct: 419 IDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKI 478
Query: 564 LLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVK-E 622
LL + AL +F ++++SK+ + +++ G + L + +
Sbjct: 479 LLDGLCDNGELEKALEIFGKIEKSKMELD-IGIYMIIIHGMCNASKVDDAWDLFCSLPLK 537
Query: 623 GQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKY 682
G ++D +N +I C+K + A+ ++M GH P+ T++ ++ +
Sbjct: 538 GVKLD--ARAYNIMISELCRKDSLSKADILFRKMTEEGHAPDELTYNILIRAHLG-DDDA 594
Query: 683 TEVTELWGEMKS 694
T EL EMKS
Sbjct: 595 TTAAELIEEMKS 606
Score = 39.7 bits (91), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 29/115 (25%), Positives = 52/115 (45%), Gaps = 5/115 (4%)
Query: 633 WNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEM 692
+N +++ C + + +A + + RM +GH P T +++V G + GK ++ L M
Sbjct: 161 FNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLC-LNGKVSDAVVLIDRM 219
Query: 693 KSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFIDKYKYRTLF 747
T +E VL + G A A E++ MEE + +D KY +
Sbjct: 220 ----VETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIII 270
>gi|473874|gb|AAA17740.1| a membrane-associated salt-inducible protein [Nicotiana tabacum]
Length = 435
Score = 77.0 bits (188), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 65/249 (26%), Positives = 117/249 (46%), Gaps = 12/249 (4%)
Query: 448 QPTEKIYIKLVKAFLEAGKT-KELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQ 506
+PT + ++ ++ AF +AG K L F + + AL I + +D+
Sbjct: 63 RPTSRTFMPIIHAFAKAGAIRKALDVFDMMRRSGCIPTVQTYNAL---ILGLVEKRQMDK 119
Query: 507 AHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQ 566
A +++DEM LAG+R + Y +++ Y + + G++LD YEALL+
Sbjct: 120 AVEVVDEMLLAGIRPNERTYTTIMDGYASLGDTGKAFEYFSRIKDEGLELDVYTYEALLK 179
Query: 567 SKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVK-EGQR 625
+ AL + KEM IPR+ + +L+ G A+ + A L+Q+++ EG +
Sbjct: 180 ACCKSGRIESALAVTKEMNAKNIPRNTFV-YNILIDGWARRSDVWEAADLMQQMRQEGVQ 238
Query: 626 IDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFH-SMVTGYAAIGGKYTE 684
D +H + + ++ CK MQ A ++ M+ +G P + S G+A++ K +
Sbjct: 239 PD--IHTYTSFVNACCKAGDMQKAMNTIQEMKRVGLNPMLKPIPLSYTVGHASLPEKALK 296
Query: 685 VTELWGEMK 693
E EMK
Sbjct: 297 CFE---EMK 302
>gi|359486541|ref|XP_002275423.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g16880-like [Vitis vinifera]
Length = 778
Score = 76.3 bits (186), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 72/309 (23%), Positives = 127/309 (41%), Gaps = 12/309 (3%)
Query: 445 GILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWL 504
GI+ P + ++ + K K+ FL K N S D+ ++ G L
Sbjct: 203 GIV-PNVNTFNIVIYGYCLENKFKDAVEFLNVMGKYN--CSPDNVTYNTILDTLCKKGRL 259
Query: 505 DQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEAL 564
A DLL +M G+ + + Y L+ Y + +E ++ + D Y L
Sbjct: 260 GDARDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMTQNNLLPDVWTYNML 319
Query: 565 LQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKE-G 623
+ + A L EM+ K+ + L+ GC + + KLL+E+ E G
Sbjct: 320 INGLCNEGRIEEAFKLRDEMENLKL-LPDVVSYNTLINGCLEWSKISEAFKLLEEMSEKG 378
Query: 624 QRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYT 683
+ + H N ++ ++CK+ M DA + +M G P+ T+++++ GY G
Sbjct: 379 VKPNAVTH--NIMVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTLINGYCK-AGNMG 435
Query: 684 EVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFIDKYKY 743
E EM +M D L+++L T R A ++++ + FID+ Y
Sbjct: 436 EAFRTMDEM----GRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSARKRGYFIDEVSY 491
Query: 744 RTLFLKYHK 752
TL + Y K
Sbjct: 492 GTLIVGYFK 500
Score = 75.9 bits (185), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 111/510 (21%), Positives = 210/510 (41%), Gaps = 50/510 (9%)
Query: 247 IAMKPNTNTFNIALAGCLLFETTRKAEQLLDIMPRIGVKADSNLLIIMAHIYERNGRREE 306
+ + PN NTFNI + G L + A + L++M + D+ + + GR +
Sbjct: 202 LGIVPNVNTFNIVIYGYCLENKFKDAVEFLNVMGKYNCSPDNVTYNTILDTLCKKGRLGD 261
Query: 307 LRKLQRHIDEAVNLSDIQFRQFYNCLLSCHLKFGDLNSASKMVLEMLQRAKEARNSLAAA 366
R L + L + R YN L+ + K G L A+ ++ M Q N+L
Sbjct: 262 ARDLLMDMKSRGLLPN---RNTYNILVYGYCKMGWLKEAANVIELMTQ------NNLLPD 312
Query: 367 MLPFNAV--GVNNRTPSEQNVNCTNSVDLENSGIIENHILSYEDFTKDRKFVALE-AEVK 423
+ +N + G+ N E+ + ++EN ++ + ++SY LE +++
Sbjct: 313 VWTYNMLINGLCNEGRIEEAFKLRD--EMENLKLLPD-VVSYNTLING----CLEWSKIS 365
Query: 424 RVLQTLLGMLQKQVELITTEHGILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQ 483
+ L M +K V+ H I +VK + + GK + ++ + K E+
Sbjct: 366 EAFKLLEEMSEKGVKPNAVTHNI----------MVKWYCKEGKMDDASNTITKMEESGF- 414
Query: 484 VSHDDAALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVT 543
S D +I G + +A +DEM ++ S ++L+ + E
Sbjct: 415 -SPDCVTYNTLINGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEAY 473
Query: 544 ALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKG 603
LL AR G +D Y L+ + AL L+ EMKE +I S + ++ G
Sbjct: 474 KLLSSARKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPS-TVTYNCIIGG 532
Query: 604 ---CAQNHEAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALK---RMR 657
C + +A ++KL + ++ G D +N ++H +C++ D EKA + +M
Sbjct: 533 LCQCGKTEQA--ISKLNELLESGLLPD--ETTYNTILHGYCRE---GDVEKAFQFHNKMV 585
Query: 658 SLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVR 717
P+ T + ++ G G V E ++ + S D ++++ + +
Sbjct: 586 ENSFKPDVFTCNILLRGLCMEG-----VLEKALKLFNTWVSKGKAIDTVTYNTLITSLCK 640
Query: 718 GGFFARANEVVAMMEEGKMFIDKYKYRTLF 747
G A +++ MEE ++ D Y Y +
Sbjct: 641 EGRLDDAFNLLSEMEEKELGPDHYTYNAII 670
Score = 46.6 bits (109), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 45/192 (23%), Positives = 89/192 (46%), Gaps = 24/192 (12%)
Query: 501 LGWL--DQAHDLLDEMHLAGVRASSSVYASL---LKAYIEANRPREVTALLRDARSAGIQ 555
LG++ D+ HDL HL+ +R +S A L + AY+++ +P + + + ++
Sbjct: 112 LGFIATDRRHDL----HLSILRLTSPSKALLDTAIGAYVQSGQPHHAFQIFKKMKRLRLR 167
Query: 556 LDASCYEALLQSKIVQKDTPGALHLFKE-----MKESKIPRSGHQEFEMLVKG-CAQNHE 609
+ LL S +V+ + ++ +E +K +P F +++ G C +N
Sbjct: 168 PNLLTCNTLLNS-LVRYPSSHSVSFSREAFNDAIKLGIVPNV--NTFNIVIYGYCLENK- 223
Query: 610 AGLMAKLLQEVKEGQRIDCGVHD--WNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQT 667
++ + + +C + +N ++ CKK + DA L M+S G LPN T
Sbjct: 224 ---FKDAVEFLNVMGKYNCSPDNVTYNTILDTLCKKGRLGDARDLLMDMKSRGLLPNRNT 280
Query: 668 FHSMVTGYAAIG 679
++ +V GY +G
Sbjct: 281 YNILVYGYCKMG 292
>gi|225439731|ref|XP_002272943.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic [Vitis vinifera]
Length = 772
Score = 76.3 bits (186), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 67/262 (25%), Positives = 119/262 (45%), Gaps = 14/262 (5%)
Query: 494 VITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAG 553
+ LC LG +++A ++L++M L ++ Y +L+ + N+ E T L R S G
Sbjct: 358 IFGLC-KLGEVEEAVEILNQMILRDFSPNTVTYNTLISTLCKENQVEEATELARVLTSKG 416
Query: 554 IQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKG-CAQNHEAGL 612
I D + +L+Q + + A+ LF+EMK +K + ML+ C++ G
Sbjct: 417 ILPDVCTFNSLIQGLCLTNNHRLAMELFEEMK-TKGCHPDEFTYNMLIDSLCSR----GR 471
Query: 613 MAKLLQEVKEGQRIDCG--VHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHS 670
+ + L +KE + C V +N +I FCK + +++AE+ M G N T+++
Sbjct: 472 LEEALSLLKEMESSGCSRNVVTYNTLIDGFCKNKRIEEAEEIFDEMELQGISRNVVTYNT 531
Query: 671 MVTGYAAIGGKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAM 730
++ G + E +L +M + D+ +S+L F R G +A ++V
Sbjct: 532 LIDGLCK-NRRVEEAAQLMDQML----MEGLKPDKFTYNSLLTYFCRAGDIKKAADIVQT 586
Query: 731 MEEGKMFIDKYKYRTLFLKYHK 752
M D Y TL L K
Sbjct: 587 MTSNGCEPDSVTYGTLILGLSK 608
Score = 59.7 bits (143), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 100/473 (21%), Positives = 181/473 (38%), Gaps = 48/473 (10%)
Query: 248 AMKPNTNTFNIALAGCLLFETTRKAEQLLDIMPRIGVKADSNLLIIMAHIYERNGRREEL 307
+ P+ TF + G + A ++ + M G + + + ++ H Y + GR EE+
Sbjct: 241 GLSPDEKTFTTLMQGFIEEGNMNGALRIREQMVAAGCPSSNVTVNVLVHGYCKEGRIEEV 300
Query: 308 RKLQRHIDEAVNLSDIQFRQFYNCLLSCHLKFGDLNSASKMVLEMLQRAKEAR----NSL 363
IDE N R +N L++ + G + A +++ MLQ + NSL
Sbjct: 301 LSF---IDEMSNEGFRPDRFTFNSLVNGLCRIGHVKHALEILDVMLQEGFDPDIFTYNSL 357
Query: 364 AAAMLPFNAVGVNNRTPSEQNVNCTNSV---DLENSGIIENHILSYEDFTKDRKFVALEA 420
+ V E+ V N + D + + N ++S K+ + V
Sbjct: 358 IFGLCKLGEV--------EEAVEILNQMILRDFSPNTVTYNTLIS--TLCKENQ-VEEAT 406
Query: 421 EVKRVLQTLLGMLQK--------QVELITTEHGI------------LQPTEKIYIKLVKA 460
E+ RVL T G+L Q +T H + P E Y L+ +
Sbjct: 407 ELARVL-TSKGILPDVCTFNSLIQGLCLTNNHRLAMELFEEMKTKGCHPDEFTYNMLIDS 465
Query: 461 FLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQAHDLLDEMHLAGVR 520
G+ +E L E E+ S + +I +++A ++ DEM L G+
Sbjct: 466 LCSRGRLEEALSLL--KEMESSGCSRNVVTYNTLIDGFCKNKRIEEAEEIFDEMELQGIS 523
Query: 521 ASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHL 580
+ Y +L+ + R E L+ G++ D Y +LL D A +
Sbjct: 524 RNVVTYNTLIDGLCKNRRVEEAAQLMDQMLMEGLKPDKFTYNSLLTYFCRAGDIKKAADI 583
Query: 581 FKEMKESKI-PRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRIDCGVHDWNNVIHF 639
+ M + P S + L+ G ++ L ++LL+ V+ + +N VI
Sbjct: 584 VQTMTSNGCEPDS--VTYGTLILGLSKAGRVELASRLLRTVQLKGMV-LAPQTYNPVIKA 640
Query: 640 FCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEM 692
+++ +A + + M G P+A T+ + G + GG E + EM
Sbjct: 641 LFREKRTSEAVRLFREMMEKGDPPDAVTYKVVFRGLCSGGGPIGEAVDFLVEM 693
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/185 (22%), Positives = 90/185 (48%), Gaps = 7/185 (3%)
Query: 518 GVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQKDTPGA 577
G++ + + L+KA A++ R ++ + S G+ D + L+Q I + + GA
Sbjct: 206 GIKPDVTTFNILIKALCRAHQIRPAILMMEEMGSYGLSPDEKTFTTLMQGFIEEGNMNGA 265
Query: 578 LHLFKEMKESKIPRSGHQEFEMLVKG-CAQNHEAGLMAKLLQEVKEGQRIDCGVHDWNNV 636
L + ++M + P S + +LV G C + +++ + + EG R D +N++
Sbjct: 266 LRIREQMVAAGCP-SSNVTVNVLVHGYCKEGRIEEVLSFIDEMSNEGFRPD--RFTFNSL 322
Query: 637 IHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEM--KS 694
++ C+ ++ A + L M G P+ T++S++ G + G+ E E+ +M +
Sbjct: 323 VNGLCRIGHVKHALEILDVMLQEGFDPDIFTYNSLIFGLCKL-GEVEEAVEILNQMILRD 381
Query: 695 FASST 699
F+ +T
Sbjct: 382 FSPNT 386
Score = 41.6 bits (96), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 83/181 (45%), Gaps = 11/181 (6%)
Query: 504 LDQAHDLLDEMHLA-GVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYE 562
D+A ++D M G++ + Y LL ++ N+ + V + S GI+ D + +
Sbjct: 156 FDEAVAVVDIMEEEFGLKLDAFTYNFLLNVLVDGNKLKLVEIVNSRMVSRGIKPDVTTFN 215
Query: 563 ALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKE 622
L+++ A+ + +EM + + F L++G E G M L+ ++E
Sbjct: 216 ILIKALCRAHQIRPAILMMEEMGSYGL-SPDEKTFTTLMQGFI---EEGNMNGALR-IRE 270
Query: 623 GQRIDCGVHDWN---NV-IHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAI 678
Q + G N NV +H +CK+ +++ + M + G P+ TF+S+V G I
Sbjct: 271 -QMVAAGCPSSNVTVNVLVHGYCKEGRIEEVLSFIDEMSNEGFRPDRFTFNSLVNGLCRI 329
Query: 679 G 679
G
Sbjct: 330 G 330
>gi|147819144|emb|CAN78081.1| hypothetical protein VITISV_021300 [Vitis vinifera]
Length = 778
Score = 76.3 bits (186), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 70/305 (22%), Positives = 124/305 (40%), Gaps = 11/305 (3%)
Query: 449 PTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQAH 508
P + ++ + K K+ FL K N S D+ ++ G L A
Sbjct: 206 PNVNTFNIVIYGYCLENKFKDAVEFLNVMGKYN--CSPDNVTYNTILDALCKKGRLGDAR 263
Query: 509 DLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSK 568
DLL +M G+ + + Y L+ Y + +E ++ + D Y L+
Sbjct: 264 DLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMTQNNLLPDVWTYNMLINGL 323
Query: 569 IVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKE-GQRID 627
+ A L EM+ K+ + L+ GC + + KLL+E+ E G + +
Sbjct: 324 CNEGRIEEAFKLRDEMENLKL-LPDVVSYNTLINGCLEWSKISEAFKLLEEMSEKGVKPN 382
Query: 628 CGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTE 687
H N ++ ++CK+ M DA + +M G P+ T+++++ GY G E
Sbjct: 383 AVTH--NIMVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTLINGYCK-AGNMGEAFR 439
Query: 688 LWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFIDKYKYRTLF 747
EM +M D L+++L T R A ++++ + FID+ Y TL
Sbjct: 440 TMDEM----GRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSARKRGYFIDEVSYGTLI 495
Query: 748 LKYHK 752
+ Y K
Sbjct: 496 VGYFK 500
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 112/512 (21%), Positives = 210/512 (41%), Gaps = 54/512 (10%)
Query: 247 IAMKPNTNTFNIALAGCLLFETTRKAEQLLDIMPRIGVKADSNLLIIMAHIYERNGRREE 306
+ + PN NTFNI + G L + A + L++M + D+ + + GR +
Sbjct: 202 LGIVPNVNTFNIVIYGYCLENKFKDAVEFLNVMGKYNCSPDNVTYNTILDALCKKGRLGD 261
Query: 307 LRKLQRHIDEAVNLSDIQFRQFYNCLLSCHLKFGDLNSASKMVLEMLQRAKEARNSLAAA 366
R L + L + R YN L+ + K G L A+ ++ M Q N+L
Sbjct: 262 ARDLLMDMKSRGLLPN---RNTYNILVYGYCKMGWLKEAANVIELMTQ------NNLLPD 312
Query: 367 MLPFNAV--GVNNRTPSEQNVNCTNSVDLENSGIIENHILSYEDFTKDRKFVALE-AEVK 423
+ +N + G+ N E+ + ++EN ++ + ++SY LE +++
Sbjct: 313 VWTYNMLINGLCNEGRIEEAFKLRD--EMENLKLLPD-VVSYNTLING----CLEWSKIS 365
Query: 424 RVLQTLLGMLQKQVELITTEHGILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQ 483
+ L M +K V+ H I +VK + + GK + ++ + K E+
Sbjct: 366 EAFKLLEEMSEKGVKPNAVTHNI----------MVKWYCKEGKMDDASNTITKMEESGF- 414
Query: 484 VSHDDAALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVT 543
S D +I G + +A +DEM ++ S ++L+ + E
Sbjct: 415 -SPDCVTYNTLINGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEAY 473
Query: 544 ALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKG 603
LL AR G +D Y L+ + AL L+ EMKE +I S + ++ G
Sbjct: 474 KLLSSARKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPS-TVTYNCIIGG 532
Query: 604 ---CAQNHEAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALK---RMR 657
C + +A ++KL + ++ G D +N ++H +C++ D EKA + +M
Sbjct: 533 LCQCGKTEQA--ISKLNELLESGLLPD--ETTYNTILHGYCRE---GDVEKAFQFHNKMV 585
Query: 658 SLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEMKSFAS--STSMNFDEELLDSVLYTF 715
P+ T + ++ G G L +K F + S D ++++ +
Sbjct: 586 ENSFKPDVFTCNILLRGLCMEG-------MLEKALKLFNTWVSKGKAIDTVTYNTLITSL 638
Query: 716 VRGGFFARANEVVAMMEEGKMFIDKYKYRTLF 747
+ G A +++ MEE ++ D Y Y +
Sbjct: 639 CKEGRLDDAFNLLSEMEEKELGPDHYTYNAII 670
Score = 46.2 bits (108), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 45/192 (23%), Positives = 89/192 (46%), Gaps = 24/192 (12%)
Query: 501 LGWL--DQAHDLLDEMHLAGVRASSSVYASL---LKAYIEANRPREVTALLRDARSAGIQ 555
LG++ D+ HDL HL+ +R +S A L + AY+++ +P + + + ++
Sbjct: 112 LGFIATDRRHDL----HLSILRLTSPSKALLDTAIGAYVQSGQPHHAFQIFKKMKRLRLR 167
Query: 556 LDASCYEALLQSKIVQKDTPGALHLFKE-----MKESKIPRSGHQEFEMLVKG-CAQNHE 609
+ LL S +V+ + ++ +E +K +P F +++ G C +N
Sbjct: 168 PNLLTCNTLLNS-LVRYPSSHSVSFSREAFNDAIKLGIVPNV--NTFNIVIYGYCLENK- 223
Query: 610 AGLMAKLLQEVKEGQRIDCGVHD--WNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQT 667
++ + + +C + +N ++ CKK + DA L M+S G LPN T
Sbjct: 224 ---FKDAVEFLNVMGKYNCSPDNVTYNTILDALCKKGRLGDARDLLMDMKSRGLLPNRNT 280
Query: 668 FHSMVTGYAAIG 679
++ +V GY +G
Sbjct: 281 YNILVYGYCKMG 292
>gi|147862640|emb|CAN81487.1| hypothetical protein VITISV_033285 [Vitis vinifera]
Length = 1024
Score = 76.3 bits (186), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 109/467 (23%), Positives = 199/467 (42%), Gaps = 44/467 (9%)
Query: 251 PNTNTFNIALAGCLLFETTRKAEQLLDIMPRIGVKADSNLLIIMAHIYERNGRREELRKL 310
P+ ++ + G + A +LL+ M G+K + + I+ Y GR EE R+L
Sbjct: 436 PSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSILIMAYASEGRIEEARRL 495
Query: 311 QRHIDEAVNLSDIQFRQF-YNCLLSCHLKFGDLNSASKMVLEMLQRA-KEARNSLAAAML 368
+ ++ S + F YN ++SC K G + AS +LE+ R K + A +L
Sbjct: 496 L----DGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFIL 551
Query: 369 PFNAVGVNNRTPSEQNVNCTNSVDLENSGIIENH----ILSYEDFTKDRKFVALEAEVKR 424
++ G T + + + ++ + G++ N+ +L F AL + R
Sbjct: 552 GYSKTG--KMTEAAKYFD-----EMLDHGLMPNNPLYTVLINGHFKAGNLMEALS--IFR 602
Query: 425 VLQTLLGMLQKQVELITTEHGILQPTE-KIYIKLVKAFLEAGKTKE-------LTHFLIK 476
L L G+L HG+L+ + +K+ E G + ++ F +
Sbjct: 603 RLHAL-GVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQ 661
Query: 477 AEKENLQVSHDDAAL-----------GHVITLCISLGWLDQAHDLLDEMHLAGVRASSSV 525
E E HD+ L V LC S G + +A L D M G+ S
Sbjct: 662 GEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKS-GDIQRARKLFDGMPEKGLEPDSVT 720
Query: 526 YASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMK 585
Y++++ Y ++ E +L + S G+Q + Y AL+ + D A++LF+EM
Sbjct: 721 YSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREML 780
Query: 586 ESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRL 645
+ + F L+ G ++ + ++L QE+ Q + V + VI + CK
Sbjct: 781 QKGFATT--LSFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHV-TYTTVIDWHCKAGK 837
Query: 646 MQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEM 692
M++A K M+ + + T+ S++ GY + G+ +EV L+ +M
Sbjct: 838 MEEANLLFKEMQERNLIVDTVTYTSLMYGYNKL-GQSSEVFALFEKM 883
Score = 62.4 bits (150), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 99/465 (21%), Positives = 184/465 (39%), Gaps = 29/465 (6%)
Query: 248 AMKPNTNTFNIALAGCLLFETTRKAEQLLDIMPRIGVKADSNLLIIMAHIYERNGRREEL 307
+ PNT T+ I AG + +A+ + M + G+K D N + + R G +E+
Sbjct: 293 GLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGDIDEV 352
Query: 308 RKLQRHIDEAVNLSDIQFRQFYNCLLSCHLKFGDLNSASKMVLEMLQRAKEARNSLAAAM 367
+++ D V+ YN L+ KFG + A++++ M+ + NS +
Sbjct: 353 LRIK---DVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMVTLGCKP-NSRTFCL 408
Query: 368 LPFNAVGVNNRTPSEQNVNCTNSVDLENS----GIIENHILSYEDFTKDRK------FVA 417
L +N + + ++ +L S G + N + +D + K F
Sbjct: 409 LIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSG 468
Query: 418 LEAEVKRVLQTLLGMLQKQVELITTEHGILQ--------PTEKIYIKLVKAFLEAGKTKE 469
L+ V V+ ++L M I +L P Y ++ +AGK +E
Sbjct: 469 LKPNV--VVYSILIMAYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEE 526
Query: 470 LTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASL 529
+ +L++ + L+ D G I G + +A DEM G+ ++ +Y L
Sbjct: 527 ASTYLLEIQGRGLK--PDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVL 584
Query: 530 LKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKI 589
+ + +A E ++ R + G+ D A + + AL +F E+KE +
Sbjct: 585 INGHFKAGNLMEALSIFRRLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGL 644
Query: 590 PRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDA 649
+ L+ G + E +L E+ + I + +N ++ CK +Q A
Sbjct: 645 VPDVFT-YSSLISGFCKQGEVEKAFELHDEMCL-KGIAPNIFIYNALVDGLCKSGDIQRA 702
Query: 650 EKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEMKS 694
K M G P++ T+ +M+ GY E L+ EM S
Sbjct: 703 RKLFDGMPEKGLEPDSVTYSTMIDGYCK-SENVAEAFSLFHEMPS 746
Score = 46.6 bits (109), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 48/223 (21%), Positives = 84/223 (37%), Gaps = 39/223 (17%)
Query: 454 YIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQAHDLLDE 513
Y LV A + G + LI+ +++ L + +L VI +G +D+A +L
Sbjct: 231 YTYLVGALCKTGDLRGAKRVLIEMDEKGLNPNEFIYSL--VIEGMCQVGDIDEAVELKRS 288
Query: 514 MHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQKD 573
M G+ ++ Y + A R E + + G++ D + AL+ + + D
Sbjct: 289 MGEKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGD 348
Query: 574 TPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRIDCGVHDW 633
L + M IP + + +
Sbjct: 349 IDEVLRIKDVMVSCGIPIN-------------------------------------LITY 371
Query: 634 NNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYA 676
N +IH CK M+ A + LK M +LG PN++TF ++ GY
Sbjct: 372 NVLIHGLCKFGKMEKAAEILKGMVTLGCKPNSRTFCLLIEGYC 414
>gi|8778650|gb|AAF79658.1|AC025416_32 F5O11.4 [Arabidopsis thaliana]
Length = 975
Score = 75.9 bits (185), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 74/308 (24%), Positives = 133/308 (43%), Gaps = 14/308 (4%)
Query: 442 TEHGILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISL 501
E+G QP Y ++ ++G+T L K E+ N+++ D +I
Sbjct: 318 VEYGC-QPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKL--DAVKYSIIIDGLCKH 374
Query: 502 GWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCY 561
G LD A +L +EM + G+ + Y L+ + A R + LLRD I + +
Sbjct: 375 GSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTF 434
Query: 562 EALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNH--EAGLMAKLLQE 619
L+ S + + A L KEM I ++ C +NH +A M L+
Sbjct: 435 SVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLM-- 492
Query: 620 VKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIG 679
V +G D + +N +I+ +CK + D + ++M G + + T+++++ G+ +
Sbjct: 493 VSKG--CDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCEL- 549
Query: 680 GKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFID 739
GK EL+ EM S ++ + LLD + G +A E+ +E+ KM +D
Sbjct: 550 GKLNVAKELFQEMVSRKVPPNIVTYKILLDGL----CDNGESEKALEIFEKIEKSKMELD 605
Query: 740 KYKYRTLF 747
Y +
Sbjct: 606 IGIYNIII 613
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 104/502 (20%), Positives = 198/502 (39%), Gaps = 71/502 (14%)
Query: 247 IAMKPNTNTFNIALAGCLLFETTRKAEQLLDIMPRIGVKADSNLLIIMAHIYERNGRREE 306
+ +PNT TF+ + G L +A +L+D M +G K D + + + +G+ E
Sbjct: 250 LGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAE 309
Query: 307 LRKLQRHIDEAVNLSDIQFRQFYNCLLSCHLKFGDLNSASKMVLEMLQRAKEARNSLAAA 366
L ID+ V Y +L+ K G + + +E+L++ +E L A
Sbjct: 310 AMLL---IDKMVEYGCQPNAVTYGPVLNVMCKSG----QTALAMELLRKMEERNIKLDAV 362
Query: 367 MLPFNAVGVNNRTPSEQNVNCTNSVDLENSGIIENHILSYEDFTKDRKFVALEAEVKRVL 426
G+ + N N ++E GI N I++Y + ++L
Sbjct: 363 KYSIIIDGLCKHGSLDNAFNLFN--EMEMKGITTN-IITYNILIGGFCNAGRWDDGAKLL 419
Query: 427 QTLLGMLQKQVELITTEHGILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSH 486
+ M+++++ P + L+ +F++ GK +E AE+ + ++ H
Sbjct: 420 RD---MIKRKI----------NPNVVTFSVLIDSFVKEGKLRE-------AEELHKEMIH 459
Query: 487 DDAALGHVITLCISLGW-----LDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPRE 541
A + + G+ LD+A+ ++D M G + + L+ Y +ANR +
Sbjct: 460 RGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDD 519
Query: 542 VTALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLV 601
L R G+ D Y L+Q A LF+EM K+P +++L+
Sbjct: 520 GLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVP-PNIVTYKILL 578
Query: 602 KGCAQNHEA-------------------GLMAKLLQEVKEGQRID------C-------- 628
G N E+ G+ ++ + ++D C
Sbjct: 579 DGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVK 638
Query: 629 -GVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTE 687
GV +N +I CKK + +AE ++M GH P+ T++ ++ + G T+ +
Sbjct: 639 PGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLG-DGDATKSVK 697
Query: 688 LWGEMKSFASSTSMNFDEELLD 709
L E+K S + + ++D
Sbjct: 698 LIEELKRCGFSVDASTIKMVID 719
Score = 45.1 bits (105), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 66/132 (50%), Gaps = 3/132 (2%)
Query: 561 YEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEV 620
Y L+S +V A+ LF++M S+ P +F L A+ + L+ L +++
Sbjct: 154 YRERLRSGLVDIKADDAIDLFRDMIHSR-PLPTVIDFSRLFSAIAKTKQYDLVLALCKQM 212
Query: 621 KEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGG 680
E + I ++ + +I+ FC+ R + A A+ ++ LG+ PN TF +++ G + G
Sbjct: 213 -ELKGIAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGL-CLEG 270
Query: 681 KYTEVTELWGEM 692
+ +E EL M
Sbjct: 271 RVSEALELVDRM 282
>gi|414590400|tpg|DAA40971.1| TPA: hypothetical protein ZEAMMB73_404079 [Zea mays]
Length = 745
Score = 75.9 bits (185), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 71/294 (24%), Positives = 124/294 (42%), Gaps = 12/294 (4%)
Query: 454 YIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQAHDLLDE 513
Y L+KA +AG+ K+ + + + D G +I +LG L+ A LLDE
Sbjct: 262 YNILLKALCDAGRVKDARQLF-----DEMASAPDVVTYGILIHGHCALGELENAVKLLDE 316
Query: 514 MHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQKD 573
M GV +++VY S++ + + ++ D + LD + Y +L + D
Sbjct: 317 MVAGGVEPNATVYTSVVALLCDKGWISDALRVVEDMVQRKVILDEALYTTVLSGFCNKGD 376
Query: 574 TPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRIDCGVHDW 633
A F EM+ + G + ++ G + E KLLQE+ +R+D +
Sbjct: 377 LVSARRWFDEMQRKGLATDG-VTYTTMINGLCRAVELEEAEKLLQEM-WARRLDVDEVTY 434
Query: 634 NNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEMK 693
+I +CK+ M +A + M G PN T+ ++ G G EL EM
Sbjct: 435 TVLIDGYCKRGKMAEAFQMHNAMVQRGVTPNVVTYTALTDGLCK-QGDVQAANELLHEM- 492
Query: 694 SFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFIDKYKYRTLF 747
S+ + + +S++ + G+ +A +A M+ + D Y Y TL
Sbjct: 493 ---SNKGLELNACTYNSLINGLCKAGYLEQAMRTMADMDTACLKPDVYTYTTLI 543
Score = 45.1 bits (105), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 109/528 (20%), Positives = 205/528 (38%), Gaps = 80/528 (15%)
Query: 180 LPVPASTILRKLVATEQYPPVTAWSAILAHMSLTAPGAYLAAELILEIGY---------- 229
L +P++ +LR+L P A +A+L+ + L A EL E+ +
Sbjct: 212 LCLPSAPLLRRLRQYGISPSPEACNAVLSRLPLDE-----AIELFQELPHKNVCSYNILL 266
Query: 230 --LFQDGRV-DPRKKCNAPLIAMKPNTNTFNIALAGCLLFETTRKAEQLLDIMPRIGVKA 286
L GRV D R+ + +A P+ T+ I + G A +LLD M GV+
Sbjct: 267 KALCDAGRVKDARQLFDE--MASAPDVVTYGILIHGHCALGELENAVKLLDEMVAGGVEP 324
Query: 287 DSNLLI-IMAHIYERNGRREELRKLQRHIDEAVNLSDIQFRQFYNCLLSCHLKFGDLNSA 345
++ + ++A + ++ + LR ++ + V L + Y +LS GDL SA
Sbjct: 325 NATVYTSVVALLCDKGWISDALRVVEDMVQRKVILDE----ALYTTVLSGFCNKGDLVSA 380
Query: 346 SKMVLEM------------------------LQRAKEARNSLAAAMLPFNAV-------G 374
+ EM L+ A++ + A L + V G
Sbjct: 381 RRWFDEMQRKGLATDGVTYTTMINGLCRAVELEEAEKLLQEMWARRLDVDEVTYTVLIDG 440
Query: 375 VNNRTPSEQNVNCTNSVDLENSGIIENHILSYEDFTKDRKFVALEAEVKRVLQTLLGMLQ 434
R + N+ + G+ N +++Y T + + +V+ + L M
Sbjct: 441 YCKRGKMAEAFQMHNA--MVQRGVTPN-VVTYTALTDG---LCKQGDVQAANELLHEMSN 494
Query: 435 KQVELITTEHGILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHV 494
K +EL Y L+ +AG ++ + A+ + + D +
Sbjct: 495 KGLELNAC----------TYNSLINGLCKAGYLEQAMRTM--ADMDTACLKPDVYTYTTL 542
Query: 495 ITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGI 554
I G LD+AH LL EM G++ + Y L+ + + R LL I
Sbjct: 543 IDALCKSGDLDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKKLLDWMLEKNI 602
Query: 555 QLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKG-C-AQNHEAGL 612
+A+ Y +L++ ++ + ++K M+ + + +L+KG C A+N + L
Sbjct: 603 HPNAATYNSLMKQYCIENNMKSTTEIYKGMRSRDV-GPNENTYNILIKGHCKARNMKEAL 661
Query: 613 MAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLG 660
+ +++G R+ ++ +I KK+ +A + MR G
Sbjct: 662 YFH-DEMIQKGFRLT--ATSYSALIRLLNKKKKFVEARELFHDMRKEG 706
Score = 44.7 bits (104), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 40/175 (22%), Positives = 77/175 (44%), Gaps = 2/175 (1%)
Query: 502 GWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCY 561
G + A++LL EM G+ ++ Y SL+ +A + + D +A ++ D Y
Sbjct: 480 GDVQAANELLHEMSNKGLELNACTYNSLINGLCKAGYLEQAMRTMADMDTACLKPDVYTY 539
Query: 562 EALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVK 621
L+ + D A L +EM + I + + +L+ G + KLL +
Sbjct: 540 TTLIDALCKSGDLDRAHSLLQEMLDKGI-KPTIVTYNVLMNGFCMSGRVEGGKKLLDWML 598
Query: 622 EGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYA 676
E + I +N+++ +C + M+ + K MRS PN T++ ++ G+
Sbjct: 599 E-KNIHPNAATYNSLMKQYCIENNMKSTTEIYKGMRSRDVGPNENTYNILIKGHC 652
>gi|414875981|tpg|DAA53112.1| TPA: hypothetical protein ZEAMMB73_920038 [Zea mays]
Length = 574
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 95/195 (48%), Gaps = 5/195 (2%)
Query: 484 VSHDDAALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYI---EANRPR 540
VS D VI+ G L +A D+ + GV S + Y +L+ Y + +
Sbjct: 184 VSPDLFTFNIVISGFCKTGQLRKAGDVAKNISAWGVAPSVATYNTLIDGYCKRGQVGKMY 243
Query: 541 EVTALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEML 600
V ALL++ AGI D + L+ + + A+ +F+EM++ IP + + L
Sbjct: 244 HVDALLKEMIQAGISPDVVTFNVLINGYCKEPNITAAIKVFQEMRQQGIP-ANVVTYNSL 302
Query: 601 VKGCAQNHEAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLG 660
V G + + KL++E++E + C + N+V++ FCKK +M +AE + + G
Sbjct: 303 VSGLCREGKVEDSIKLVEEMEE-LGLACILSTMNSVLNGFCKKGMMVEAEGWVDGIAQRG 361
Query: 661 HLPNAQTFHSMVTGY 675
PN T++++V GY
Sbjct: 362 MKPNVITYNTLVDGY 376
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 70/159 (44%), Gaps = 6/159 (3%)
Query: 518 GVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQKDTPGA 577
G+ + Y L+ + + R V+ LL + + G++ D Y L+ + + + A
Sbjct: 396 GISPNVKTYNCLITGFTTSRDWRSVSGLLDEMKEKGVKADVVTYNVLIGALCCKGEVRKA 455
Query: 578 LHLFKEMKESKI-PRSGHQEFEMLVKG-CAQNHEAGLMAKLLQEVKEGQRIDCGVHDWNN 635
+ L EM E + P+ H + ++ G C + G L+ K +R + V +N
Sbjct: 456 VKLLDEMVEVGLEPK--HVAYNTIINGFCEKGDAQGAHEIRLRMEKRKKRAN--VVTYNV 511
Query: 636 VIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTG 674
+ +FCK M +A L M G +PN T+ + +G
Sbjct: 512 FLKYFCKMGKMDEANVVLNEMLEKGLVPNRITYEIINSG 550
Score = 40.0 bits (92), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 48/112 (42%), Gaps = 3/112 (2%)
Query: 248 AMKPNTNTFNIALAGCLLFETTRKAEQLLDIMPRIGVKADSNLLIIMAHIYERNGRREEL 307
+ PN T+N + G R LLD M GVKAD ++ G E+
Sbjct: 396 GISPNVKTYNCLITGFTTSRDWRSVSGLLDEMKEKGVKADVVTYNVLIGALCCKG---EV 452
Query: 308 RKLQRHIDEAVNLSDIQFRQFYNCLLSCHLKFGDLNSASKMVLEMLQRAKEA 359
RK + +DE V + YN +++ + GD A ++ L M +R K A
Sbjct: 453 RKAVKLLDEMVEVGLEPKHVAYNTIINGFCEKGDAQGAHEIRLRMEKRKKRA 504
>gi|15221282|ref|NP_172694.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122242333|sp|Q0WKV3.1|PPR36_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g12300, mitochondrial; Flags: Precursor
gi|110741411|dbj|BAF02254.1| hypothetical protein [Arabidopsis thaliana]
gi|332190743|gb|AEE28864.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 637
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 74/308 (24%), Positives = 133/308 (43%), Gaps = 14/308 (4%)
Query: 442 TEHGILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISL 501
E+G QP Y ++ ++G+T L K E+ N+++ D +I
Sbjct: 220 VEYGC-QPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKL--DAVKYSIIIDGLCKH 276
Query: 502 GWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCY 561
G LD A +L +EM + G+ + Y L+ + A R + LLRD I + +
Sbjct: 277 GSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTF 336
Query: 562 EALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNH--EAGLMAKLLQE 619
L+ S + + A L KEM I ++ C +NH +A M L+
Sbjct: 337 SVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLM-- 394
Query: 620 VKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIG 679
V +G D + +N +I+ +CK + D + ++M G + + T+++++ G+ +
Sbjct: 395 VSKG--CDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCEL- 451
Query: 680 GKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFID 739
GK EL+ EM S ++ + LLD + G +A E+ +E+ KM +D
Sbjct: 452 GKLNVAKELFQEMVSRKVPPNIVTYKILLDGL----CDNGESEKALEIFEKIEKSKMELD 507
Query: 740 KYKYRTLF 747
Y +
Sbjct: 508 IGIYNIII 515
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 104/502 (20%), Positives = 198/502 (39%), Gaps = 71/502 (14%)
Query: 247 IAMKPNTNTFNIALAGCLLFETTRKAEQLLDIMPRIGVKADSNLLIIMAHIYERNGRREE 306
+ +PNT TF+ + G L +A +L+D M +G K D + + + +G+ E
Sbjct: 152 LGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAE 211
Query: 307 LRKLQRHIDEAVNLSDIQFRQFYNCLLSCHLKFGDLNSASKMVLEMLQRAKEARNSLAAA 366
L ID+ V Y +L+ K G + + +E+L++ +E L A
Sbjct: 212 AMLL---IDKMVEYGCQPNAVTYGPVLNVMCKSGQ----TALAMELLRKMEERNIKLDAV 264
Query: 367 MLPFNAVGVNNRTPSEQNVNCTNSVDLENSGIIENHILSYEDFTKDRKFVALEAEVKRVL 426
G+ + N N ++E GI N I++Y + ++L
Sbjct: 265 KYSIIIDGLCKHGSLDNAFNLFN--EMEMKGITTN-IITYNILIGGFCNAGRWDDGAKLL 321
Query: 427 QTLLGMLQKQVELITTEHGILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSH 486
+ M+++++ P + L+ +F++ GK +E AE+ + ++ H
Sbjct: 322 RD---MIKRKI----------NPNVVTFSVLIDSFVKEGKLRE-------AEELHKEMIH 361
Query: 487 DDAALGHVITLCISLGW-----LDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPRE 541
A + + G+ LD+A+ ++D M G + + L+ Y +ANR +
Sbjct: 362 RGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDD 421
Query: 542 VTALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLV 601
L R G+ D Y L+Q A LF+EM K+P +++L+
Sbjct: 422 GLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVP-PNIVTYKILL 480
Query: 602 KGCAQNHEA-------------------GLMAKLLQEVKEGQRID------C-------- 628
G N E+ G+ ++ + ++D C
Sbjct: 481 DGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVK 540
Query: 629 -GVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTE 687
GV +N +I CKK + +AE ++M GH P+ T++ ++ + G T+ +
Sbjct: 541 PGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLG-DGDATKSVK 599
Query: 688 LWGEMKSFASSTSMNFDEELLD 709
L E+K S + + ++D
Sbjct: 600 LIEELKRCGFSVDASTIKMVID 621
Score = 46.6 bits (109), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 75/156 (48%), Gaps = 4/156 (2%)
Query: 537 NRPREVTALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQE 596
N P E++ SA + S Y L+S +V A+ LF++M S+ P +
Sbjct: 33 NCPNELSFCCERGFSAFSDRNLS-YRERLRSGLVDIKADDAIDLFRDMIHSR-PLPTVID 90
Query: 597 FEMLVKGCAQNHEAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRM 656
F L A+ + L+ L +++ E + I ++ + +I+ FC+ R + A A+ ++
Sbjct: 91 FSRLFSAIAKTKQYDLVLALCKQM-ELKGIAHNLYTLSIMINCFCRCRKLCLAFSAMGKI 149
Query: 657 RSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEM 692
LG+ PN TF +++ G + G+ +E EL M
Sbjct: 150 IKLGYEPNTITFSTLINGL-CLEGRVSEALELVDRM 184
>gi|224109690|ref|XP_002315278.1| predicted protein [Populus trichocarpa]
gi|222864318|gb|EEF01449.1| predicted protein [Populus trichocarpa]
Length = 728
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 136/595 (22%), Positives = 232/595 (38%), Gaps = 57/595 (9%)
Query: 180 LPVPASTILRKLVATEQYP--PVTAW--SAILAHMSLTAPGAYLAAELILEIGYLFQDGR 235
+PV S+ L L+ Q PV+ S L +S+ GAY+A G Q +
Sbjct: 95 IPVDKSSSLHYLLLHPQKTNNPVSCLHISKPLLDISI---GAYVAC------GRPHQAAQ 145
Query: 236 VDPRKKCNAPLIAMKPNTNTFNIALAGCLLFETT---RKAEQLLDIMPRIGVKADSNLLI 292
+ R K + M+P T N L + F ++ R ++ + +IGVK ++N
Sbjct: 146 IFNRMK----RLGMQPTLLTCNTLLNALVRFPSSHSIRLSKAVFTDFIKIGVKINTNSFN 201
Query: 293 IMAHIYERNGR-REELRKLQRHIDEAVNLSDIQFRQFYNCLLSCHLKFGDLNSASKMVLE 351
I+ H R E +R L + D +I YN +L K G LN A ++L+
Sbjct: 202 ILIHGSCMENRFGEAIRVLGKMRDYGCPPDNIT----YNTILDGLCKKGRLNEARDLLLD 257
Query: 352 MLQRA----KEARNSLAAAMLPFN----AVGV------NNRTPSEQNVNCTNSVDLENSG 397
M + + N L A V N+ P N S +
Sbjct: 258 MKNKGLFPNRTTFNILVVGCCRLGWLKEAANVIELMSQNSVVPDAWTYNVMISGFCKQGR 317
Query: 398 IIENHIL--SYEDFTKDRKFVALEAEVKRVLQTLLGMLQKQVELITTEHGI-LQPTEKIY 454
I E L E+ V + + G ++ +LI G ++P Y
Sbjct: 318 IAEAMRLREEMENLKLSPDVVTYNTLINGCFEH--GSSEEGFKLIEEMEGRGMKPNSVTY 375
Query: 455 IKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQAHDLLDEM 514
+VK F++ GK E+ + K E+ D +I+ +G +D+A L+DEM
Sbjct: 376 NVMVKWFVKKGKMDEVDKTVRKMEESG--CLPDIVTYNTLISWHCKVGKMDEAFRLMDEM 433
Query: 515 HLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQKDT 574
G++ ++L+A + E LL AR G +D Y L+ +
Sbjct: 434 GRKGLKMDDVTLNTMLRALCRERKLDEAHDLLCSARRRGYFVDEVSYGTLIIGYFKHEKA 493
Query: 575 PGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRIDCGVHDWN 634
AL L+ EMKE +I S M+ C + KL + ++ G D +N
Sbjct: 494 SQALRLWDEMKEKEIIPSIITYNSMIAGLCQMGKTNQAIDKLDELLESGLVPD--EITYN 551
Query: 635 NVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEMKS 694
+IH +C++ ++ A + +M P+ T ++++ G G L +K
Sbjct: 552 TIIHGYCQEGQVEKAFQFHNKMVEKNFKPDVVTCNTLLCGLCKEG-------MLEKALKL 604
Query: 695 FAS--STSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFIDKYKYRTLF 747
F + S + D ++++ + + F A +++ MEE K+ D Y Y +
Sbjct: 605 FNTWISKGKDVDAVSYNTIILSLCKEKRFGEAFDLLEEMEEKKLGPDCYTYNAIL 659
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/251 (22%), Positives = 114/251 (45%), Gaps = 7/251 (2%)
Query: 502 GWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCY 561
G L++A DLL +M G+ + + + L+ +E ++ + DA Y
Sbjct: 246 GRLNEARDLLLDMKNKGLFPNRTTFNILVVGCCRLGWLKEAANVIELMSQNSVVPDAWTY 305
Query: 562 EALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVK 621
++ Q A+ L +EM+ K+ + L+ GC ++ + KL++E+
Sbjct: 306 NVMISGFCKQGRIAEAMRLREEMENLKL-SPDVVTYNTLINGCFEHGSSEEGFKLIEEM- 363
Query: 622 EGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGK 681
EG+ + +N ++ +F KK M + +K +++M G LP+ T++++++ + +G K
Sbjct: 364 EGRGMKPNSVTYNVMVKWFVKKGKMDEVDKTVRKMEESGCLPDIVTYNTLISWHCKVG-K 422
Query: 682 YTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFIDKY 741
E L EM + D+ L+++L R A++++ F+D+
Sbjct: 423 MDEAFRLMDEM----GRKGLKMDDVTLNTMLRALCRERKLDEAHDLLCSARRRGYFVDEV 478
Query: 742 KYRTLFLKYHK 752
Y TL + Y K
Sbjct: 479 SYGTLIIGYFK 489
>gi|15228763|ref|NP_188886.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75223290|sp|Q6NQ83.1|PP247_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g22470, mitochondrial; Flags: Precursor
gi|34365775|gb|AAQ65199.1| At3g22470 [Arabidopsis thaliana]
gi|51968798|dbj|BAD43091.1| hypothetical protein [Arabidopsis thaliana]
gi|332643122|gb|AEE76643.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 619
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 74/298 (24%), Positives = 132/298 (44%), Gaps = 16/298 (5%)
Query: 442 TEHGILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISL 501
E+G QP E Y ++ ++G + K E+ N++ S ++ + +LC
Sbjct: 202 VEYG-FQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSI-VIDSLCKD- 258
Query: 502 GWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCY 561
G D A L +EM + G++A Y+SL+ + + +LR+ I D +
Sbjct: 259 GSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTF 318
Query: 562 EALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKG-CAQN--HEAGLMAKLLQ 618
AL+ + + A L+ EM I + L+ G C +N HEA M L+
Sbjct: 319 SALIDVFVKEGKLLEAKELYNEMITRGIAPD-TITYNSLIDGFCKENCLHEANQMFDLM- 376
Query: 619 EVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAI 678
V +G D + ++ +I+ +CK + + D + + + S G +PN T++++V G+
Sbjct: 377 -VSKGCEPD--IVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQ- 432
Query: 679 GGKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKM 736
GK EL+ EM S S+ LLD + G +A E+ M++ +M
Sbjct: 433 SGKLNAAKELFQEMVSRGVPPSVVTYGILLDGL----CDNGELNKALEIFEKMQKSRM 486
Score = 49.3 bits (116), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 56/251 (22%), Positives = 98/251 (39%), Gaps = 7/251 (2%)
Query: 502 GWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCY 561
G + +A L+D M R ++L+ R E L+ G Q D Y
Sbjct: 154 GRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTY 213
Query: 562 EALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVK 621
+L ++ AL LF++M+E I S Q + +++ ++ L E+
Sbjct: 214 GPVLNRLCKSGNSALALDLFRKMEERNIKASVVQ-YSIVIDSLCKDGSFDDALSLFNEM- 271
Query: 622 EGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGK 681
E + I V ++++I C D K L+ M +P+ TF +++ + GK
Sbjct: 272 EMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVK-EGK 330
Query: 682 YTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFIDKY 741
E EL+ EM + + D +S++ F + AN++ +M D
Sbjct: 331 LLEAKELYNEMITRGIAP----DTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIV 386
Query: 742 KYRTLFLKYHK 752
Y L Y K
Sbjct: 387 TYSILINSYCK 397
Score = 42.4 bits (98), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 33/132 (25%), Positives = 63/132 (47%), Gaps = 3/132 (2%)
Query: 561 YEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEV 620
Y+ L++ IV A+ LF+ M +S+ P +F L A+ + L+ + +
Sbjct: 38 YKERLRNGIVDIKVNDAIDLFESMIQSR-PLPTPIDFNRLCSAVARTKQYDLVLGFCKGM 96
Query: 621 KEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGG 680
E I+ ++ +I+ +C+K+ + A L R LG+ P+ TF ++V G+ + G
Sbjct: 97 -ELNGIEHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGF-CLEG 154
Query: 681 KYTEVTELWGEM 692
+ +E L M
Sbjct: 155 RVSEAVALVDRM 166
>gi|359485848|ref|XP_002267947.2| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
mitochondrial-like [Vitis vinifera]
Length = 1011
Score = 75.1 bits (183), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 108/471 (22%), Positives = 206/471 (43%), Gaps = 48/471 (10%)
Query: 249 MKPNTNTFNIALAGCLLFETTRKAEQLLDIMPRIGVKADSNLLIIMAHIYERNGRREELR 308
+ P T+++ + G + +L M G+K ++ + + + + GR EE R
Sbjct: 421 LAPTVLTYSVIINGLCRCGNLQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESR 480
Query: 309 KLQRHIDEAVNLSDIQFRQFYNCLLSCHLKFGDLNSASKMVLEMLQRA-KEARNSLAAAM 367
+ + E L D+ YN L+ K + A ++EML+R + ++ A +
Sbjct: 481 MILERMREQGILPDVFC---YNSLIIGFCKAKRMEEARTYLMEMLERRLRPNAHTYGAFI 537
Query: 368 LPFNAVG---VNNRTPSEQNVNCTNSVDLENSGI----IENHILS---YEDFTKDRKFVA 417
++ G + +R +E ++C L N GI IE H E F+ R ++
Sbjct: 538 DGYSKAGEMEIADRYFNEM-LSCGV---LPNVGIYTALIEGHCKEGNVTEAFSVFRFILS 593
Query: 418 LEAEVKRVLQTLL------------GMLQKQVELIT--TEHGILQPTEKIYIKLVKAFLE 463
+RVLQ + G + + + + E G+L P Y L+ +
Sbjct: 594 -----RRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLL-PNAFTYNSLISGSCK 647
Query: 464 AGKTKELTHFLIKAEKENLQVSHDDAALGHVIT--LCISLGWLDQAHDLLDEMHLAGVRA 521
G + + L E+ ++ + D +++ LC + G +++A +L D++ G+
Sbjct: 648 QGNVDKASQLL---EEMCIKGINPDIVTYNILIDGLCKA-GEIERAKNLFDDIEGRGLTP 703
Query: 522 SSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLF 581
+ YA+++ Y ++ P LL + G+ DA Y +L ++ AL LF
Sbjct: 704 NCVTYAAMVDGYCKSKNPTAAFQLLEEMLLRGVPPDAFIYNVILNFCCKEEKFEKALDLF 763
Query: 582 KEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFC 641
+EM E + F L++G ++ + LL+E+ E Q I V + ++I C
Sbjct: 764 QEMLEKGFAST--VSFNTLIEGYCKSGKLQEANHLLEEMIEKQFIPNHV-TYTSLIDHNC 820
Query: 642 KKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEM 692
K +M +A++ M+ +P A+T+ S++ GY I G +EV+ L+ EM
Sbjct: 821 KAGMMGEAKRLWLEMQERNVMPTAKTYTSLLHGYHNI-GNMSEVSALFEEM 870
Score = 59.7 bits (143), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 110/562 (19%), Positives = 222/562 (39%), Gaps = 80/562 (14%)
Query: 247 IAMKPNTNTFNIALAGCLLFETTRKAEQLLDIMPRIGVKADSNLLI---IMAHIYERNGR 303
+ +KP T+N + G + +A ++ D M G++A NL+I ++ + +
Sbjct: 314 VGLKPEPITYNALIDGFMRQGDIEQAFRIKDEMVACGIEA--NLIIWNTLLNGVCKAGKM 371
Query: 304 REELRKLQRHIDEAVNLSDIQFRQFYNCLLSCHLKFGDLNSASKMVLEMLQRAKEARNSL 363
+ L +Q +++ V Q Y+ L+ H + ++ A +++ EM +R L
Sbjct: 372 EKALEIMQEMMEKGVEPDS----QTYSLLIEGHCRGQNMARAFELLDEMKKR------KL 421
Query: 364 AAAMLPFNAVGVNNRTPSEQNVNCTNSV--DLENSGIIENHILSYEDFTKDRKFVALEAE 421
A +L ++ + +N N+ TN++ ++ +G+ N ++ T K +E E
Sbjct: 422 APTVLTYSVI-INGLCRC-GNLQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVE-E 478
Query: 422 VKRVLQTLLGMLQKQVELITTEHGILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKEN 481
+ +L+ + E GIL P Y L+ F +A + +E +L++ +
Sbjct: 479 SRMILERM------------REQGIL-PDVFCYNSLIIGFCKAKRMEEARTYLMEMLERR 525
Query: 482 LQVSHDDAALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPRE 541
L+ + G I G ++ A +EM GV + +Y +L++ + + E
Sbjct: 526 LR--PNAHTYGAFIDGYSKAGEMEIADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTE 583
Query: 542 VTALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLV 601
++ R S + D Y L+ A +F E++E + + + L+
Sbjct: 584 AFSVFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFT-YNSLI 642
Query: 602 KGCAQNHEAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGH 661
G + ++LL+E+ + I+ + +N +I CK ++ A+ + G
Sbjct: 643 SGSCKQGNVDKASQLLEEMCI-KGINPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGL 701
Query: 662 LPNAQTFHSMVTGYAAIGG----------------------------------KYTEVTE 687
PN T+ +MV GY K+ + +
Sbjct: 702 TPNCVTYAAMVDGYCKSKNPTAAFQLLEEMLLRGVPPDAFIYNVILNFCCKEEKFEKALD 761
Query: 688 LWGEM--KSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFIDKYKYRT 745
L+ EM K FAS+ S N +++ + + G AN ++ M E + + Y +
Sbjct: 762 LFQEMLEKGFASTVSFN-------TLIEGYCKSGKLQEANHLLEEMIEKQFIPNHVTYTS 814
Query: 746 LFLKYHKTLYKGKTPKFQTEAQ 767
L K G+ + E Q
Sbjct: 815 LIDHNCKAGMMGEAKRLWLEMQ 836
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/231 (21%), Positives = 106/231 (45%), Gaps = 6/231 (2%)
Query: 447 LQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQ 506
L P Y L+ F +++E L+ E ++ + + +I + G ++Q
Sbjct: 281 LVPDLYTYDILINGFCMEKRSREAKLMLL--EMIDVGLKPEPITYNALIDGFMRQGDIEQ 338
Query: 507 AHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQ 566
A + DEM G+ A+ ++ +LL +A + + ++++ G++ D+ Y L++
Sbjct: 339 AFRIKDEMVACGIEANLIIWNTLLNGVCKAGKMEKALEIMQEMMEKGVEPDSQTYSLLIE 398
Query: 567 SKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKG-CAQNHEAGLMAKLLQEVKEGQR 625
++ A L EMK+ K+ + + +++ G C + G A L + V G +
Sbjct: 399 GHCRGQNMARAFELLDEMKKRKLAPT-VLTYSVIINGLCRCGNLQGTNAILREMVMNGLK 457
Query: 626 IDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYA 676
+ V+ H K+ ++++ L+RMR G LP+ ++S++ G+
Sbjct: 458 PNAVVYTTLMTAH--AKEGRVEESRMILERMREQGILPDVFCYNSLIIGFC 506
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/219 (23%), Positives = 94/219 (42%), Gaps = 6/219 (2%)
Query: 457 LVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQAHDLLDEMHL 516
L++ + ++GK +E H L + ++ +H +I G + +A L EM
Sbjct: 780 LIEGYCKSGKLQEANHLLEEMIEKQFIPNH--VTYTSLIDHNCKAGMMGEAKRLWLEMQE 837
Query: 517 AGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQKDTPG 576
V ++ Y SLL Y EV+AL + + GI+ D Y ++ + + +
Sbjct: 838 RNVMPTAKTYTSLLHGYHNIGNMSEVSALFEEMVAKGIEPDKMTYYVMIDAYCREGNVME 897
Query: 577 ALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKE-GQRIDCGVHDWNN 635
A L E+ +P S ++ L++ + E + KLL E+ E G R+ G+ +
Sbjct: 898 ACKLKDEILVKGMPMS-VAAYDALIQALCKKEEFFEVLKLLNEIGESGFRL--GLPTCSV 954
Query: 636 VIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTG 674
+ F M +A + L+ M G + N + +V G
Sbjct: 955 IARGFQIAGNMDEAAEVLRSMVKFGWVSNTTSLGDLVDG 993
>gi|11994279|dbj|BAB01462.1| unnamed protein product [Arabidopsis thaliana]
Length = 648
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 74/298 (24%), Positives = 132/298 (44%), Gaps = 16/298 (5%)
Query: 442 TEHGILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISL 501
E+G QP E Y ++ ++G + K E+ N++ S ++ + +LC
Sbjct: 231 VEYG-FQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSI-VIDSLCKD- 287
Query: 502 GWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCY 561
G D A L +EM + G++A Y+SL+ + + +LR+ I D +
Sbjct: 288 GSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTF 347
Query: 562 EALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKG-CAQN--HEAGLMAKLLQ 618
AL+ + + A L+ EM I + L+ G C +N HEA M L+
Sbjct: 348 SALIDVFVKEGKLLEAKELYNEMITRGIA-PDTITYNSLIDGFCKENCLHEANQMFDLM- 405
Query: 619 EVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAI 678
V +G D + ++ +I+ +CK + + D + + + S G +PN T++++V G+
Sbjct: 406 -VSKGCEPD--IVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQ- 461
Query: 679 GGKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKM 736
GK EL+ EM S S+ LLD + G +A E+ M++ +M
Sbjct: 462 SGKLNAAKELFQEMVSRGVPPSVVTYGILLDGL----CDNGELNKALEIFEKMQKSRM 515
Score = 49.7 bits (117), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 56/251 (22%), Positives = 98/251 (39%), Gaps = 7/251 (2%)
Query: 502 GWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCY 561
G + +A L+D M R ++L+ R E L+ G Q D Y
Sbjct: 183 GRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTY 242
Query: 562 EALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVK 621
+L ++ AL LF++M+E I S Q + +++ ++ L E+
Sbjct: 243 GPVLNRLCKSGNSALALDLFRKMEERNIKASVVQ-YSIVIDSLCKDGSFDDALSLFNEM- 300
Query: 622 EGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGK 681
E + I V ++++I C D K L+ M +P+ TF +++ + GK
Sbjct: 301 EMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVK-EGK 359
Query: 682 YTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFIDKY 741
E EL+ EM + + D +S++ F + AN++ +M D
Sbjct: 360 LLEAKELYNEMITRGIAP----DTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIV 415
Query: 742 KYRTLFLKYHK 752
Y L Y K
Sbjct: 416 TYSILINSYCK 426
Score = 42.0 bits (97), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 33/132 (25%), Positives = 63/132 (47%), Gaps = 3/132 (2%)
Query: 561 YEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEV 620
Y+ L++ IV A+ LF+ M +S+ P +F L A+ + L+ + +
Sbjct: 67 YKERLRNGIVDIKVNDAIDLFESMIQSR-PLPTPIDFNRLCSAVARTKQYDLVLGFCKGM 125
Query: 621 KEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGG 680
E I+ ++ +I+ +C+K+ + A L R LG+ P+ TF ++V G+ + G
Sbjct: 126 -ELNGIEHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGF-CLEG 183
Query: 681 KYTEVTELWGEM 692
+ +E L M
Sbjct: 184 RVSEAVALVDRM 195
>gi|242056139|ref|XP_002457215.1| hypothetical protein SORBIDRAFT_03g003430 [Sorghum bicolor]
gi|241929190|gb|EES02335.1| hypothetical protein SORBIDRAFT_03g003430 [Sorghum bicolor]
Length = 573
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 100/212 (47%), Gaps = 7/212 (3%)
Query: 484 VSHDDAALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIE---ANRPR 540
VS D VI+ G L +A D+ +M G+ S Y +L+ Y + A +
Sbjct: 184 VSPDKFTFNIVISGLCKTGQLRKAGDVAKDMRGWGLMPSVVTYNTLIDGYYKWGRAGKMY 243
Query: 541 EVTALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEML 600
V LL++ AGI + + L+ + + A+ +F+EM++ IP + + L
Sbjct: 244 HVDMLLKEMNQAGISPNVVTFNVLINGYCKESNITAAIKVFEEMRQHGIP-ANMVTYTSL 302
Query: 601 VKGCAQNHEAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLG 660
V G + + KL++E++E + N+V++ FCKK +M +AE + M G
Sbjct: 303 VSGLCREGKVEDSMKLVEEMEELGLAT--LPTLNSVLNGFCKKGMMVEAEGWVDGMAQKG 360
Query: 661 HLPNAQTFHSMVTGYAAIGGKYTEVTELWGEM 692
PN T+++++ GY + GK E T G M
Sbjct: 361 MKPNVVTYNTLIDGYQRL-GKMKEATAAKGAM 391
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 93/441 (21%), Positives = 169/441 (38%), Gaps = 90/441 (20%)
Query: 249 MKPNTNTFNIALAGCLLFETTRKAEQLL------DIMPRIGVKADSNLLIIMAHIYERNG 302
+ P+ TFNI ++G RKA + +MP + N LI + + R G
Sbjct: 184 VSPDKFTFNIVISGLCKTGQLRKAGDVAKDMRGWGLMPSV---VTYNTLIDGYYKWGRAG 240
Query: 303 RREELRKLQRHIDEA-VNLSDIQFRQFYNCLLSCHLKFGDLNSASKMVLEMLQRAKEARN 361
+ + L + +++A ++ + + F N L++ + K ++ +A K+ EM Q +
Sbjct: 241 KMYHVDMLLKEMNQAGISPNVVTF----NVLINGYCKESNITAAIKVFEEMRQ------H 290
Query: 362 SLAAAMLPFNAV--GVNNRTPSEQNVNCTNSVDLENSGIIE----NHILSYEDFTKDRKF 415
+ A M+ + ++ G+ E ++ ++E G+ N +L+ F K
Sbjct: 291 GIPANMVTYTSLVSGLCREGKVEDSMKLVE--EMEELGLATLPTLNSVLN--GFCKKGMM 346
Query: 416 VALEAEVKRVLQTLLGMLQKQVELITTEHGILQPTEKIYIKLVKAFLEAGKTKELTHFLI 475
V E V GM QK ++P Y L+ + GK KE T
Sbjct: 347 VEAEGWVD-------GMAQKG----------MKPNVVTYNTLIDGYQRLGKMKEAT---- 385
Query: 476 KAEKENLQVSHDDAALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIE 535
AA G M G+ Y L+ +
Sbjct: 386 -------------AAKG--------------------AMAGKGISPDVKTYNCLITGFTT 412
Query: 536 ANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKI-PRSGH 594
+ R V+ LL + + G++ D Y L+ + + + A+ L EM E + P+ H
Sbjct: 413 STDWRSVSGLLDEMKETGVKADLVTYNVLIGALCCKGEVRKAVKLLDEMVEVGLEPK--H 470
Query: 595 QEFEMLVKG-CAQNHEAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKAL 653
+ + ++ G C + G ++ K +R + V N + +FCK M +A L
Sbjct: 471 RTYNAIINGFCEKGDAKGAHDIRIRMEKCKKRAN--VVTCNVFLKYFCKMGKMDEANVVL 528
Query: 654 KRMRSLGHLPNAQTFHSMVTG 674
M G +PN T+ + +G
Sbjct: 529 NEMLEKGLVPNRITYEIINSG 549
>gi|30794106|gb|AAP40495.1| unknown protein [Arabidopsis thaliana]
Length = 974
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 74/330 (22%), Positives = 144/330 (43%), Gaps = 44/330 (13%)
Query: 447 LQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQ 506
L P + Y L++ + ++ L++ +K N+ +S G V+ S G LD
Sbjct: 378 LIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISP--YTYGTVVKGMCSSGDLDG 435
Query: 507 AHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQ 566
A++++ EM +G R + +Y +L+K +++ +R + +L++ + GI D CY +L+
Sbjct: 436 AYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLII 495
Query: 567 SKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRI 626
K A EM E+ + + + + G + E K ++E++E
Sbjct: 496 GLSKAKRMDEARSFLVEMVENGLKPNAFT-YGAFISGYIEASEFASADKYVKEMRE---- 550
Query: 627 DCGVHD----WNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKY 682
CGV +I+ +CKK + +A A + M G L +A+T+ ++ G K
Sbjct: 551 -CGVLPNKVLCTGLINEYCKKEKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFK-NDKV 608
Query: 683 TEVTELWGEMKS-------FASSTSMN--------------FDEELLDS-----VLYTFV 716
+ E++ EM+ F+ +N FDE + + ++Y +
Sbjct: 609 DDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNML 668
Query: 717 RGGFFARANEVVAMMEEGKMFIDKYKYRTL 746
GG F R+ E+ E+ K +D+ + L
Sbjct: 669 LGG-FCRSGEI----EKAKELLDEMSVKGL 693
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 58/251 (23%), Positives = 101/251 (40%), Gaps = 6/251 (2%)
Query: 443 EHGILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLG 502
E GI P Y L+ +A + E FL++ + L+ + G I+ I
Sbjct: 480 EQGI-APDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLK--PNAFTYGAFISGYIEAS 536
Query: 503 WLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYE 562
A + EM GV + + L+ Y + + E + R GI DA Y
Sbjct: 537 EFASADKYVKEMRECGVLPNKVLCTGLINEYCKKEKVIEACSAYRSMVDQGILGDAKTYT 596
Query: 563 ALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKE 622
L+ A +F+EM+ I + +L+ G ++ + + E+ E
Sbjct: 597 VLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFS-YGVLINGFSKLGNMQKASSIFDEMVE 655
Query: 623 GQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKY 682
+ + V +N ++ FC+ ++ A++ L M G PNA T+ +++ GY G
Sbjct: 656 -EGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCK-SGDL 713
Query: 683 TEVTELWGEMK 693
E L+ EMK
Sbjct: 714 AEAFRLFDEMK 724
Score = 56.6 bits (135), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 49/233 (21%), Positives = 106/233 (45%), Gaps = 10/233 (4%)
Query: 502 GWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCY 561
G +++A +LLDEM + G+ ++ Y +++ Y ++ E L + + G+ D+ Y
Sbjct: 676 GEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVY 735
Query: 562 EALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVK 621
L+ D A+ +F K K S F L+ + + L ++L +
Sbjct: 736 TTLVDGCCRLNDVERAITIFGTNK--KGCASSTAPFNALINWVFKFGKTELKTEVLNRLM 793
Query: 622 EGQRIDCGVHD---WNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAI 678
+G G + +N +I + CK+ ++ A++ +M++ +P T+ S++ GY +
Sbjct: 794 DGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKM 853
Query: 679 GGKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMM 731
G+ E+ ++ E A + + D + ++ F++ G +A +V M
Sbjct: 854 -GRRAEMFPVFDE----AIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQM 901
Score = 40.0 bits (92), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 65/306 (21%), Positives = 120/306 (39%), Gaps = 33/306 (10%)
Query: 452 KIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQAHDLL 511
K Y L+ A AG + L K EKE + + +D A L
Sbjct: 222 KTYHMLIIAHCRAGNVQLGKDVLFKTEKEFRTATLN----------------VDGALKLK 265
Query: 512 DEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQ 571
+ M G+ Y L+ + R + +LL + S G+ LD Y L+ +
Sbjct: 266 ESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKG 325
Query: 572 KDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLM--AKLLQEVKEGQRIDCG 629
++ A L EM I + ++ + C + E G+M AK L + +
Sbjct: 326 RNADAAKGLVHEMVSHGINIKPYM-YDCCI--CVMSKE-GVMEKAKALFDGMIASGLIPQ 381
Query: 630 VHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIG---GKYTEVT 686
+ ++I +C+++ ++ + L M+ + + T+ ++V G + G G Y V
Sbjct: 382 AQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVK 441
Query: 687 ELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFIDKYKYRTL 746
E+ AS N + +++ TF++ F A V+ M+E + D + Y +L
Sbjct: 442 EM------IASGCRPNV--VIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSL 493
Query: 747 FLKYHK 752
+ K
Sbjct: 494 IIGLSK 499
>gi|242065464|ref|XP_002454021.1| hypothetical protein SORBIDRAFT_04g023230 [Sorghum bicolor]
gi|241933852|gb|EES06997.1| hypothetical protein SORBIDRAFT_04g023230 [Sorghum bicolor]
Length = 729
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 67/315 (21%), Positives = 133/315 (42%), Gaps = 17/315 (5%)
Query: 444 HGILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGW 503
HG +P Y ++K+ + + KE+ AE + + + D+ ++T G
Sbjct: 261 HGC-KPDAVTYTPVLKSLCGSERWKEVEELF--AEMASNKCAPDEVTFNTIVTSLCQQGL 317
Query: 504 LDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEA 563
+D+A ++D M G Y+S+L + R + LL +S G + D Y
Sbjct: 318 VDRAIKVVDHMSEHGCIPDIVTYSSILDGLCDVGRVDDAVELLSRLKSYGCKPDTIAYTT 377
Query: 564 LLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEG 623
+L+ + A L EM S P F ++ Q GL+ + ++ V++
Sbjct: 378 VLKGLCSIEQWEHAEELMAEMVCSDCP-PDEVTFNTVIASLCQK---GLVDRAIKVVEQM 433
Query: 624 QRIDCG--VHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGK 681
C + +N++I C +R + DA + L ++S G P+ TF++++ G ++ +
Sbjct: 434 SENGCNPDIVTYNSIIDGLCNERCIDDAMELLSNLQSYGCKPDIVTFNTLLKGLCSV-DR 492
Query: 682 YTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFIDKY 741
+ + +L M + D ++V+ + + G +A E + +M E ++
Sbjct: 493 WEDAEQLMVNMM----HSDCPPDATTFNTVITSLCQKGLLLQAIETLKIMAENGCIPNQS 548
Query: 742 KYRTL---FLKYHKT 753
Y + LK KT
Sbjct: 549 TYNIVVDALLKAGKT 563
>gi|449519270|ref|XP_004166658.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g19440, chloroplastic-like [Cucumis sativus]
Length = 799
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 64/299 (21%), Positives = 121/299 (40%), Gaps = 45/299 (15%)
Query: 449 PTEKI-YIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQA 507
P ++I Y L+ F GK + F ++ E + D ++ ++G LD A
Sbjct: 497 PMDRITYNALILGFCNEGKVEGC--FRLREEMTKRGIQPDIYTYNFLLRGLCNVGKLDDA 554
Query: 508 HDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQS 567
L DE +G+ ++ Y +++ Y +ANR +V L + S ++L++ Y ++++
Sbjct: 555 IKLWDEFKASGLISNIHTYGIMMEGYCKANRIEDVENLFNELLSKKMELNSIVYNIIIKA 614
Query: 568 KIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRID 627
+ AL L + MK I + CA
Sbjct: 615 HCQNGNVAAALQLLENMKSKGI-----------LPNCAT--------------------- 642
Query: 628 CGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTE 687
++++IH C L++DA+ + MR G +PN + +++ GY + G+
Sbjct: 643 -----YSSLIHGVCNIGLVEDAKHLIDEMRKEGFVPNVVCYTALIGGYCKL-GQMDTAES 696
Query: 688 LWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFIDKYKYRTL 746
W EM SF + ++D + + G +AN ++ M+E + D Y L
Sbjct: 697 TWLEMISFNIHPNKFTYTVMIDG----YCKLGNMEKANNLLIKMKESGIVPDVVTYNVL 751
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 67/299 (22%), Positives = 120/299 (40%), Gaps = 13/299 (4%)
Query: 454 YIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQAHDLLDE 513
+ ++ A + GK + +K EK L +S + +I G LD A +L ++
Sbjct: 223 FTNVINALCKGGKMENAIELFMKMEK--LGISPNVVTYNCIINGLCQNGRLDNAFELKEK 280
Query: 514 MHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQKD 573
M + GV+ + Y +L+ I+ N +V +L + AG + + L+ +
Sbjct: 281 MTVKGVQPNLKTYGALINGLIKLNFFDKVNHILDEMIGAGFNPNVVVFNNLIDGYCKMGN 340
Query: 574 TPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRIDCGVHDW 633
GAL + M I + + ++ C + L + + G I H
Sbjct: 341 IEGALKIKDVMISKNITPTSVTLYSLMQGFCKSDQIEHAENALEEILSSGLSI----HPD 396
Query: 634 N--NVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGE 691
N +V+H+ CKK A + K M S P+ +V G GK+ E TELW
Sbjct: 397 NCYSVVHWLCKKFRYHSAFRFTKMMLSRNFRPSDLLLTMLVCGLCK-DGKHLEATELWFR 455
Query: 692 MKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFIDKYKYRTLFLKY 750
+ S S + +++++ G A+ +V M E + +D+ Y L L +
Sbjct: 456 LLEKGSPAS----KVTSNALIHGLCGAGKLPEASRIVKEMLERGLPMDRITYNALILGF 510
>gi|449487793|ref|XP_004157803.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74850,
chloroplastic-like [Cucumis sativus]
Length = 864
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 105/473 (22%), Positives = 183/473 (38%), Gaps = 89/473 (18%)
Query: 302 GRREELRKLQRHIDEAVNLSDIQFRQFYNCLLSCHLKFGDLNSASKMVLEMLQRAKEARN 361
GR L K DE + I+ Y L++ + + G ++ LE+L+R K R
Sbjct: 159 GREGLLEKCSEIFDEMASQGVIRSVFSYTALINAYGRNGQYETS----LELLERMKRER- 213
Query: 362 SLAAAMLPFNAVGVNNRTPSEQNVNCTNSVDLENSGI-----------IENHILSYEDFT 410
++ +L +N V +N DL+ G+ ++ +++Y
Sbjct: 214 -VSPNILTYNTV-----------INACARGDLDWEGLLGLFAEMRHEGVQPDLVTYNTLL 261
Query: 411 KDRKFVALEAEVKRVLQTLLGMLQKQVELITTEHGILQPTEKIYIKLVKAFLEAGKTKEL 470
L E + V +T++ E GI+ P Y +V+ F + GK +++
Sbjct: 262 SACAARGLGDEAEMVFKTMI------------EGGIV-PEITTYSYIVETFGKLGKLEKV 308
Query: 471 THFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLL 530
L + E E D ++ +I LG + +A D+ +M AG ++S Y+ LL
Sbjct: 309 AMLLKEMESEGYL--PDISSYNVLIEAHAKLGSIKEAMDVFKQMQAAGCVPNASTYSILL 366
Query: 531 KAYIEANRPREVTALLRDARSAGIQLDASCYEALLQ------------------------ 566
Y + R +V L + + + DA+ Y L++
Sbjct: 367 NLYGKHGRYDDVRELFLQMKESSAEPDATTYNILIRVFGEGGYFKEVVTLFHDLVDENID 426
Query: 567 ------SKIVQKDTPGALH------LFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMA 614
+V G LH LF + +P S + G A ++ L+A
Sbjct: 427 PNMETYEGLVFACGKGGLHEDAKKILFHMNGKGIVPSSKAYSGLIEAYGQAALYDEALVA 486
Query: 615 -KLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVT 673
+ EV ID +N++IH F + L ++ E L RMR G NA++F ++
Sbjct: 487 FNTMNEVGSKSTIDT----YNSLIHTFARGGLYKEFEAILSRMREYGISRNAKSFSGIIE 542
Query: 674 GYAAIGGKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANE 726
GY G+Y E + + EM+ DE+ L+ VL + G + E
Sbjct: 543 GYRQ-SGQYEEAIKAFVEMEKM----RCELDEQTLEGVLGVYCFAGLVDESKE 590
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 90/450 (20%), Positives = 168/450 (37%), Gaps = 73/450 (16%)
Query: 248 AMKPNTNTFNIALAGCLLFETTRKAEQLLDIMPRIGVKADSNLLIIMAHIYERNGRREEL 307
++P+ T+N L+ C +AE + M G+ + + + + G+ E++
Sbjct: 249 GVQPDLVTYNTLLSACAARGLGDEAEMVFKTMIEGGIVPEITTYSYIVETFGKLGKLEKV 308
Query: 308 RKLQRHIDEAVNLSDIQFRQFYNCLLSCHLKFGDLNSASKMVLEMLQRAKEARNSLAAAM 367
L + ++ L DI YN L+ H K G + A V + +Q A N+ ++
Sbjct: 309 AMLLKEMESEGYLPDISS---YNVLIEAHAKLGSIKEAMD-VFKQMQAAGCVPNASTYSI 364
Query: 368 LPFNAVGVNNRTPSEQNVNCTNSVDLENSGIIENHILSYEDFTKDRKFVALEAEVKRVLQ 427
L N G + R Y+D V +
Sbjct: 365 L-LNLYGKHGR---------------------------YDD----------------VRE 380
Query: 428 TLLGMLQKQVELITTEHGILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHD 487
L M + E P Y L++ F E G KE+ EN+ + +
Sbjct: 381 LFLQMKESSAE----------PDATTYNILIRVFGEGGYFKEVVTLFHDLVDENIDPNME 430
Query: 488 DAALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLR 547
++ C G + A +L M+ G+ SS Y+ L++AY +A E
Sbjct: 431 --TYEGLVFACGKGGLHEDAKKILFHMNGKGIVPSSKAYSGLIEAYGQAALYDEALVAFN 488
Query: 548 DARSAGIQLDASCYEALLQSKIVQKDTPGALH-----LFKEMKESKIPRSGHQEFEMLVK 602
G + Y +L+ + G L+ + M+E I R+ + F +++
Sbjct: 489 TMNEVGSKSTIDTYNSLIHTF-----ARGGLYKEFEAILSRMREYGISRNA-KSFSGIIE 542
Query: 603 GCAQNHEAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHL 662
G Q+ + K E+ E R + V+ +C L+ ++++ +++ G L
Sbjct: 543 GYRQSGQYEEAIKAFVEM-EKMRCELDEQTLEGVLGVYCFAGLVDESKEQFIEIKASGIL 601
Query: 663 PNAQTFHSMVTGYAAIGGKYTEVTELWGEM 692
P+ + M+ YA G++ + +EL EM
Sbjct: 602 PSVLCYCMMLAVYAK-NGRWDDASELLDEM 630
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 69/282 (24%), Positives = 118/282 (41%), Gaps = 52/282 (18%)
Query: 493 HVITLCISL----GWLDQAHDLLDEMHLAGVRASSSVYASLLKAY------------IEA 536
H+ T+ ISL G L++ ++ DEM GV S Y +L+ AY +E
Sbjct: 149 HIYTIIISLLGREGLLEKCSEIFDEMASQGVIRSVFSYTALINAYGRNGQYETSLELLER 208
Query: 537 NRPREVT------------------------ALLRDARSAGIQLDASCYEALLQSKIVQK 572
+ V+ L + R G+Q D Y LL + +
Sbjct: 209 MKRERVSPNILTYNTVINACARGDLDWEGLLGLFAEMRHEGVQPDLVTYNTLLSACAARG 268
Query: 573 DTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVK-EGQRIDCGVH 631
A +FK M E I + +V+ + + +A LL+E++ EG D +
Sbjct: 269 LGDEAEMVFKTMIEGGIVPE-ITTYSYIVETFGKLGKLEKVAMLLKEMESEGYLPD--IS 325
Query: 632 DWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGE 691
+N +I K +++A K+M++ G +PNA T+ ++ Y G+Y +V EL+ +
Sbjct: 326 SYNVLIEAHAKLGSIKEAMDVFKQMQAAGCVPNASTYSILLNLYGK-HGRYDDVRELFLQ 384
Query: 692 MKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEE 733
MK +S D + ++ F GG+F EVV + +
Sbjct: 385 MK----ESSAEPDATTYNILIRVFGEGGYF---KEVVTLFHD 419
>gi|449469490|ref|XP_004152453.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74850,
chloroplastic-like [Cucumis sativus]
Length = 864
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 105/473 (22%), Positives = 183/473 (38%), Gaps = 89/473 (18%)
Query: 302 GRREELRKLQRHIDEAVNLSDIQFRQFYNCLLSCHLKFGDLNSASKMVLEMLQRAKEARN 361
GR L K DE + I+ Y L++ + + G ++ LE+L+R K R
Sbjct: 159 GREGLLEKCSEIFDEMASQGVIRSVFSYTALINAYGRNGQYETS----LELLERMKRER- 213
Query: 362 SLAAAMLPFNAVGVNNRTPSEQNVNCTNSVDLENSGI-----------IENHILSYEDFT 410
++ +L +N V +N DL+ G+ ++ +++Y
Sbjct: 214 -VSPNILTYNTV-----------INACARGDLDWEGLLGLFAEMRHEGVQPDLVTYNTLL 261
Query: 411 KDRKFVALEAEVKRVLQTLLGMLQKQVELITTEHGILQPTEKIYIKLVKAFLEAGKTKEL 470
L E + V +T++ E GI+ P Y +V+ F + GK +++
Sbjct: 262 SACAARGLGDEAEMVFKTMI------------EGGIV-PEITTYSYIVETFGKLGKLEKV 308
Query: 471 THFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLL 530
L + E E D ++ +I LG + +A D+ +M AG ++S Y+ LL
Sbjct: 309 AMLLKEMESEGYL--PDISSYNVLIEAHAKLGSIKEAMDVFKQMQAAGCVPNASTYSILL 366
Query: 531 KAYIEANRPREVTALLRDARSAGIQLDASCYEALLQ------------------------ 566
Y + R +V L + + + DA+ Y L++
Sbjct: 367 NLYGKHGRYDDVRELFLQMKESSAEPDATTYNILIRVFGEGGYFKEVVTLFHDLVDENID 426
Query: 567 ------SKIVQKDTPGALH------LFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMA 614
+V G LH LF + +P S + G A ++ L+A
Sbjct: 427 PNMETYEGLVFACGKGGLHEDAKKILFHMNGKGIVPSSKAYSGLIEAYGQAALYDEALVA 486
Query: 615 -KLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVT 673
+ EV ID +N++IH F + L ++ E L RMR G NA++F ++
Sbjct: 487 FNTMNEVGSKSTIDT----YNSLIHTFARGGLYKEFEAILSRMREYGISRNAKSFSGIIE 542
Query: 674 GYAAIGGKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANE 726
GY G+Y E + + EM+ DE+ L+ VL + G + E
Sbjct: 543 GYRQ-SGQYEEAIKAFVEMEKM----RCELDEQTLEGVLGVYCFAGLVDESKE 590
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 90/450 (20%), Positives = 168/450 (37%), Gaps = 73/450 (16%)
Query: 248 AMKPNTNTFNIALAGCLLFETTRKAEQLLDIMPRIGVKADSNLLIIMAHIYERNGRREEL 307
++P+ T+N L+ C +AE + M G+ + + + + G+ E++
Sbjct: 249 GVQPDLVTYNTLLSACAARGLGDEAEMVFKTMIEGGIVPEITTYSYIVETFGKLGKLEKV 308
Query: 308 RKLQRHIDEAVNLSDIQFRQFYNCLLSCHLKFGDLNSASKMVLEMLQRAKEARNSLAAAM 367
L + ++ L DI YN L+ H K G + A V + +Q A N+ ++
Sbjct: 309 AMLLKEMESEGYLPDISS---YNVLIEAHAKLGSIKEAMD-VFKQMQAAGCVPNASTYSI 364
Query: 368 LPFNAVGVNNRTPSEQNVNCTNSVDLENSGIIENHILSYEDFTKDRKFVALEAEVKRVLQ 427
L N G + R Y+D V +
Sbjct: 365 L-LNLYGKHGR---------------------------YDD----------------VRE 380
Query: 428 TLLGMLQKQVELITTEHGILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHD 487
L M + E P Y L++ F E G KE+ EN+ + +
Sbjct: 381 LFLQMKESSAE----------PDATTYNILIRVFGEGGYFKEVVTLFHDLVDENIDPNME 430
Query: 488 DAALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLR 547
++ C G + A +L M+ G+ SS Y+ L++AY +A E
Sbjct: 431 --TYEGLVFACGKGGLHEDAKKILFHMNGKGIVPSSKAYSGLIEAYGQAALYDEALVAFN 488
Query: 548 DARSAGIQLDASCYEALLQSKIVQKDTPGALH-----LFKEMKESKIPRSGHQEFEMLVK 602
G + Y +L+ + G L+ + M+E I R+ + F +++
Sbjct: 489 TMNEVGSKSTIDTYNSLIHTF-----ARGGLYKEFEAILSRMREYGISRNA-KSFSGIIE 542
Query: 603 GCAQNHEAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHL 662
G Q+ + K E+ E R + V+ +C L+ ++++ +++ G L
Sbjct: 543 GYRQSGQYEEAIKAFVEM-EKMRCELDEQTLEGVLGVYCFAGLVDESKEQFIEIKASGIL 601
Query: 663 PNAQTFHSMVTGYAAIGGKYTEVTELWGEM 692
P+ + M+ YA G++ + +EL EM
Sbjct: 602 PSVLCYCMMLAVYAK-NGRWDDASELLDEM 630
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 70/283 (24%), Positives = 119/283 (42%), Gaps = 54/283 (19%)
Query: 493 HVITLCISL----GWLDQAHDLLDEMHLAGVRASSSVYASLLKAY------------IEA 536
H+ T+ ISL G L++ ++ DEM GV S Y +L+ AY +E
Sbjct: 149 HIYTIIISLLGREGLLEKCSEIFDEMASQGVIRSVFSYTALINAYGRNGQYETSLELLER 208
Query: 537 NRPREVT------------------------ALLRDARSAGIQLDASCYEALLQSKIVQK 572
+ V+ L + R G+Q D Y LL + +
Sbjct: 209 MKRERVSPNILTYNTVINACARGDLDWEGLLGLFAEMRHEGVQPDLVTYNTLLSACAARG 268
Query: 573 DTPGALHLFKEMKESKI-PRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVK-EGQRIDCGV 630
A +FK M E I P + +V+ + + +A LL+E++ EG D +
Sbjct: 269 LGDEAEMVFKTMIEGGIVPEI--TTYSYIVETFGKLGKLEKVAMLLKEMESEGYLPD--I 324
Query: 631 HDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWG 690
+N +I K +++A K+M++ G +PNA T+ ++ Y G+Y +V EL+
Sbjct: 325 SSYNVLIEAHAKLGSIKEAMDVFKQMQAAGCVPNASTYSILLNLYGK-HGRYDDVRELFL 383
Query: 691 EMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEE 733
+MK +S D + ++ F GG+F EVV + +
Sbjct: 384 QMK----ESSAEPDATTYNILIRVFGEGGYF---KEVVTLFHD 419
>gi|449462543|ref|XP_004149000.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
chloroplastic-like [Cucumis sativus]
Length = 822
Score = 73.6 bits (179), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 64/299 (21%), Positives = 121/299 (40%), Gaps = 45/299 (15%)
Query: 449 PTEKI-YIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQA 507
P ++I Y L+ F GK + F ++ E + D ++ ++G LD A
Sbjct: 520 PMDRITYNALILGFCNEGKVEGC--FRLREEMTKRGIQPDIYTYNFLLRGLCNVGKLDDA 577
Query: 508 HDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQS 567
L DE +G+ ++ Y +++ Y +ANR +V L + S ++L++ Y ++++
Sbjct: 578 IKLWDEFKASGLISNIHTYGIMMEGYCKANRIEDVENLFNELLSKKMELNSIVYNIIIKA 637
Query: 568 KIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRID 627
+ AL L + MK I + CA
Sbjct: 638 HCQNGNVAAALQLLENMKSKGI-----------LPNCAT--------------------- 665
Query: 628 CGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTE 687
++++IH C L++DA+ + MR G +PN + +++ GY + G+
Sbjct: 666 -----YSSLIHGVCNIGLVEDAKHLIDEMRKEGFVPNVVCYTALIGGYCKL-GQMDTAES 719
Query: 688 LWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFIDKYKYRTL 746
W EM SF + ++D + + G +AN ++ M+E + D Y L
Sbjct: 720 TWLEMISFNIHPNKFTYTVMIDG----YCKLGNMEKANNLLIKMKESGIVPDVVTYNVL 774
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 66/299 (22%), Positives = 120/299 (40%), Gaps = 13/299 (4%)
Query: 454 YIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQAHDLLDE 513
+ ++ A + GK + +K EK L +S + +I G LD A +L ++
Sbjct: 246 FTNVINALCKGGKMENAIELFMKMEK--LGISPNVVTYNCIINGLCQNGRLDNAFELKEK 303
Query: 514 MHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQKD 573
M + GV+ + Y +L+ I+ N +V +L + +G + + L+ +
Sbjct: 304 MTVKGVQPNLKTYGALINGLIKLNFFDKVNHVLDEMIGSGFNPNVVVFNNLIDGYCKMGN 363
Query: 574 TPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRIDCGVHDW 633
GAL + M I + + ++ C + L + + G I H
Sbjct: 364 IEGALKIKDVMISKNITPTSVTLYSLMQGFCKSDQIEHAENALEEILSSGLSI----HPD 419
Query: 634 N--NVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGE 691
N +V+H+ CKK A + K M S P+ +V G GK+ E TELW
Sbjct: 420 NCYSVVHWLCKKFRYHSAFRFTKMMLSRNFRPSDLLLTMLVCGLCK-DGKHLEATELWFR 478
Query: 692 MKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFIDKYKYRTLFLKY 750
+ S S + +++++ G A+ +V M E + +D+ Y L L +
Sbjct: 479 LLEKGSPAS----KVTSNALIHGLCGAGKLPEASRIVKEMLERGLPMDRITYNALILGF 533
>gi|297816676|ref|XP_002876221.1| hypothetical protein ARALYDRAFT_906766 [Arabidopsis lyrata subsp.
lyrata]
gi|297322059|gb|EFH52480.1| hypothetical protein ARALYDRAFT_906766 [Arabidopsis lyrata subsp.
lyrata]
Length = 754
Score = 73.6 bits (179), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 72/302 (23%), Positives = 129/302 (42%), Gaps = 15/302 (4%)
Query: 449 PTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQAH 508
P + + LV +AG K + +E D VI+ LG + +A
Sbjct: 293 PDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYD--PDVYTYNSVISGLCKLGEVKEAV 350
Query: 509 DLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSK 568
+ LD+M ++ Y +L+ + N+ E T L R S GI D + +L+Q
Sbjct: 351 EFLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGL 410
Query: 569 IVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKG-CAQNHEAGLMAKLLQEVKEGQRID 627
+ ++ A+ LF+EM+ SK + ML+ C++ G + + L +K+ +
Sbjct: 411 CLTRNHRVAMELFEEMR-SKGCEPDEFTYNMLIDSLCSK----GKLDEALNMLKQMELSG 465
Query: 628 CG--VHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEV 685
C V +N +I FCK +++AE+ M G N+ T+++++ G + +
Sbjct: 466 CARSVITYNTLIDGFCKANKIREAEEIFDEMEVHGVSRNSVTYNTLIDGLCK-SRRVEDA 524
Query: 686 TELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFIDKYKYRT 745
++L +M D+ +S+L F RGG +A ++V M D Y T
Sbjct: 525 SQLMDQMIMEGQKP----DKFTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGT 580
Query: 746 LF 747
L
Sbjct: 581 LI 582
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/180 (22%), Positives = 82/180 (45%), Gaps = 2/180 (1%)
Query: 513 EMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQK 572
+M + G++ S + L+KA A++ R +L D S G+ D + ++Q I +
Sbjct: 179 KMSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTIMQGYIEEG 238
Query: 573 DTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRIDCGVHD 632
D GAL + ++M E S + ++V G + +QE+ +
Sbjct: 239 DLDGALRIREQMVEFGCSWS-NVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYT 297
Query: 633 WNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEM 692
+N +++ CK ++ A + + M G+ P+ T++S+++G + G+ E E +M
Sbjct: 298 FNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKL-GEVKEAVEFLDQM 356
Score = 42.7 bits (99), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 40/85 (47%)
Query: 502 GWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCY 561
G + +A D++ M G Y +L+ +A R + LLR + GI L Y
Sbjct: 554 GDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGIALTPHAY 613
Query: 562 EALLQSKIVQKDTPGALHLFKEMKE 586
++Q ++ T A++LF+EM E
Sbjct: 614 NPVIQGLFRKRKTTEAINLFREMLE 638
>gi|18424537|ref|NP_568948.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170898|sp|Q9FIT7.1|PP442_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g61990, mitochondrial; Flags: Precursor
gi|10176917|dbj|BAB10161.1| unnamed protein product [Arabidopsis thaliana]
gi|332010163|gb|AED97546.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 974
Score = 73.6 bits (179), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 74/330 (22%), Positives = 144/330 (43%), Gaps = 44/330 (13%)
Query: 447 LQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQ 506
L P + Y L++ + ++ L++ +K N+ +S G V+ S G LD
Sbjct: 378 LIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISP--YTYGTVVKGMCSSGDLDG 435
Query: 507 AHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQ 566
A++++ EM +G R + +Y +L+K +++ +R + +L++ + GI D CY +L+
Sbjct: 436 AYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLII 495
Query: 567 SKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRI 626
K A EM E+ + + + + G + E K ++E++E
Sbjct: 496 GLSKAKRMDEARSFLVEMVENGLKPNAFT-YGAFISGYIEASEFASADKYVKEMRE---- 550
Query: 627 DCGVHD----WNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKY 682
CGV +I+ +CKK + +A A + M G L +A+T+ ++ G K
Sbjct: 551 -CGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFK-NDKV 608
Query: 683 TEVTELWGEMKS-------FASSTSMN--------------FDEELLDS-----VLYTFV 716
+ E++ EM+ F+ +N FDE + + ++Y +
Sbjct: 609 DDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNML 668
Query: 717 RGGFFARANEVVAMMEEGKMFIDKYKYRTL 746
GG F R+ E+ E+ K +D+ + L
Sbjct: 669 LGG-FCRSGEI----EKAKELLDEMSVKGL 693
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 58/251 (23%), Positives = 101/251 (40%), Gaps = 6/251 (2%)
Query: 443 EHGILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLG 502
E GI P Y L+ +A + E FL++ + L+ + G I+ I
Sbjct: 480 EQGI-APDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLK--PNAFTYGAFISGYIEAS 536
Query: 503 WLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYE 562
A + EM GV + + L+ Y + + E + R GI DA Y
Sbjct: 537 EFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYT 596
Query: 563 ALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKE 622
L+ A +F+EM+ I + +L+ G ++ + + E+ E
Sbjct: 597 VLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFS-YGVLINGFSKLGNMQKASSIFDEMVE 655
Query: 623 GQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKY 682
+ + V +N ++ FC+ ++ A++ L M G PNA T+ +++ GY G
Sbjct: 656 -EGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCK-SGDL 713
Query: 683 TEVTELWGEMK 693
E L+ EMK
Sbjct: 714 AEAFRLFDEMK 724
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 49/233 (21%), Positives = 106/233 (45%), Gaps = 10/233 (4%)
Query: 502 GWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCY 561
G +++A +LLDEM + G+ ++ Y +++ Y ++ E L + + G+ D+ Y
Sbjct: 676 GEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVY 735
Query: 562 EALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVK 621
L+ D A+ +F K K S F L+ + + L ++L +
Sbjct: 736 TTLVDGCCRLNDVERAITIFGTNK--KGCASSTAPFNALINWVFKFGKTELKTEVLNRLM 793
Query: 622 EGQRIDCGVHD---WNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAI 678
+G G + +N +I + CK+ ++ A++ +M++ +P T+ S++ GY +
Sbjct: 794 DGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKM 853
Query: 679 GGKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMM 731
G+ E+ ++ E A + + D + ++ F++ G +A +V M
Sbjct: 854 -GRRAEMFPVFDE----AIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQM 901
Score = 40.0 bits (92), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 65/306 (21%), Positives = 120/306 (39%), Gaps = 33/306 (10%)
Query: 452 KIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQAHDLL 511
K Y L+ A AG + L K EKE + + +D A L
Sbjct: 222 KTYHMLIIAHCRAGNVQLGKDVLFKTEKEFRTATLN----------------VDGALKLK 265
Query: 512 DEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQ 571
+ M G+ Y L+ + R + +LL + S G+ LD Y L+ +
Sbjct: 266 ESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKG 325
Query: 572 KDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLM--AKLLQEVKEGQRIDCG 629
++ A L EM I + ++ + C + E G+M AK L + +
Sbjct: 326 RNADAAKGLVHEMVSHGINIKPYM-YDCCI--CVMSKE-GVMEKAKALFDGMIASGLIPQ 381
Query: 630 VHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIG---GKYTEVT 686
+ ++I +C+++ ++ + L M+ + + T+ ++V G + G G Y V
Sbjct: 382 AQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVK 441
Query: 687 ELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFIDKYKYRTL 746
E+ AS N + +++ TF++ F A V+ M+E + D + Y +L
Sbjct: 442 EM------IASGCRPNV--VIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSL 493
Query: 747 FLKYHK 752
+ K
Sbjct: 494 IIGLSK 499
>gi|14532710|gb|AAK64156.1| unknown protein [Arabidopsis thaliana]
Length = 974
Score = 73.6 bits (179), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 74/330 (22%), Positives = 144/330 (43%), Gaps = 44/330 (13%)
Query: 447 LQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQ 506
L P + Y L++ + ++ L++ +K N+ +S G V+ S G LD
Sbjct: 378 LIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISP--YTYGTVVKGMCSSGDLDG 435
Query: 507 AHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQ 566
A++++ EM +G R + +Y +L+K +++ +R + +L++ + GI D CY +L+
Sbjct: 436 AYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLII 495
Query: 567 SKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRI 626
K A EM E+ + + + + G + E K ++E++E
Sbjct: 496 GLSKAKRMDEARSFLVEMVENGLKPNAFT-YGAFISGYIEASEFASADKYVKEMRE---- 550
Query: 627 DCGVHD----WNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKY 682
CGV +I+ +CKK + +A A + M G L +A+T+ ++ G K
Sbjct: 551 -CGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFK-NDKV 608
Query: 683 TEVTELWGEMKS-------FASSTSMN--------------FDEELLDS-----VLYTFV 716
+ E++ EM+ F+ +N FDE + + ++Y +
Sbjct: 609 DDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNML 668
Query: 717 RGGFFARANEVVAMMEEGKMFIDKYKYRTL 746
GG F R+ E+ E+ K +D+ + L
Sbjct: 669 LGG-FCRSGEI----EKAKELLDEMSVKGL 693
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 58/251 (23%), Positives = 101/251 (40%), Gaps = 6/251 (2%)
Query: 443 EHGILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLG 502
E GI P Y L+ +A + E FL++ + L+ + G I+ I
Sbjct: 480 EQGI-APDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLK--PNAFTYGAFISGYIEAS 536
Query: 503 WLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYE 562
A + EM GV + + L+ Y + + E + R GI DA Y
Sbjct: 537 EFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYT 596
Query: 563 ALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKE 622
L+ A +F+EM+ I + +L+ G ++ + + E+ E
Sbjct: 597 VLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFS-YGVLINGFSKLGNMQKASSIFDEMVE 655
Query: 623 GQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKY 682
+ + V +N ++ FC+ ++ A++ L M G PNA T+ +++ GY G
Sbjct: 656 -EGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCK-SGDL 713
Query: 683 TEVTELWGEMK 693
E L+ EMK
Sbjct: 714 AEAFRLFDEMK 724
Score = 56.6 bits (135), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 49/233 (21%), Positives = 106/233 (45%), Gaps = 10/233 (4%)
Query: 502 GWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCY 561
G +++A +LLDEM + G+ ++ Y +++ Y ++ E L + + G+ D+ Y
Sbjct: 676 GEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVY 735
Query: 562 EALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVK 621
L+ D A+ +F K K S F L+ + + L ++L +
Sbjct: 736 TTLVDGCCRLNDVERAITIFGTNK--KGCASSTAPFNALINWVFKFGKTELKTEVLNRLM 793
Query: 622 EGQRIDCGVHD---WNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAI 678
+G G + +N +I + CK+ ++ A++ +M++ +P T+ S++ GY +
Sbjct: 794 DGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKM 853
Query: 679 GGKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMM 731
G+ E+ ++ E A + + D + ++ F++ G +A +V M
Sbjct: 854 -GRRAEMFPVFDE----AIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQM 901
Score = 40.0 bits (92), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 65/306 (21%), Positives = 120/306 (39%), Gaps = 33/306 (10%)
Query: 452 KIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQAHDLL 511
K Y L+ A AG + L K EKE + + +D A L
Sbjct: 222 KTYHMLIIAHCRAGNVQLGKDVLFKTEKEFRTATLN----------------VDGALKLK 265
Query: 512 DEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQ 571
+ M G+ Y L+ + R + +LL + S G+ LD Y L+ +
Sbjct: 266 ESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKG 325
Query: 572 KDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLM--AKLLQEVKEGQRIDCG 629
++ A L EM I + ++ + C + E G+M AK L + +
Sbjct: 326 RNADAAKGLVHEMVSHGINIKPYM-YDCCI--CVMSKE-GVMEKAKALFDGMIASGLIPQ 381
Query: 630 VHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIG---GKYTEVT 686
+ ++I +C+++ ++ + L M+ + + T+ ++V G + G G Y V
Sbjct: 382 AQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVK 441
Query: 687 ELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFIDKYKYRTL 746
E+ AS N + +++ TF++ F A V+ M+E + D + Y +L
Sbjct: 442 EM------IASGCRPNV--VIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSL 493
Query: 747 FLKYHK 752
+ K
Sbjct: 494 IIGLSK 499
>gi|15231863|ref|NP_190938.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174107|sp|Q9LFF1.1|PP281_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g53700, chloroplastic; AltName: Full=Protein MATERNAL
EFFECT EMBRYO ARREST 40; Flags: Precursor
gi|6729521|emb|CAB67677.1| putative protein [Arabidopsis thaliana]
gi|15982931|gb|AAL09812.1| AT3g53700/F4P12_400 [Arabidopsis thaliana]
gi|332645608|gb|AEE79129.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 754
Score = 73.2 bits (178), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 72/302 (23%), Positives = 128/302 (42%), Gaps = 15/302 (4%)
Query: 449 PTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQAH 508
P + + LV +AG K + +E D VI+ LG + +A
Sbjct: 293 PDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYD--PDVYTYNSVISGLCKLGEVKEAV 350
Query: 509 DLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSK 568
++LD+M ++ Y +L+ + N+ E T L R S GI D + +L+Q
Sbjct: 351 EVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGL 410
Query: 569 IVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKG-CAQNHEAGLMAKLLQEVKEGQRID 627
+ ++ A+ LF+EM+ SK + ML+ C++ G + + L +K+ +
Sbjct: 411 CLTRNHRVAMELFEEMR-SKGCEPDEFTYNMLIDSLCSK----GKLDEALNMLKQMELSG 465
Query: 628 CG--VHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEV 685
C V +N +I FCK ++AE+ M G N+ T+++++ G + +
Sbjct: 466 CARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCK-SRRVEDA 524
Query: 686 TELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFIDKYKYRT 745
+L +M D+ +S+L F RGG +A ++V M D Y T
Sbjct: 525 AQLMDQMIMEGQKP----DKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGT 580
Query: 746 LF 747
L
Sbjct: 581 LI 582
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/180 (22%), Positives = 83/180 (46%), Gaps = 2/180 (1%)
Query: 513 EMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQK 572
+M + G++ S + L+KA A++ R +L D S G+ D + ++Q I +
Sbjct: 179 KMSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEG 238
Query: 573 DTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRIDCGVHD 632
D GAL + ++M E S + ++V G + +QE+ +
Sbjct: 239 DLDGALRIREQMVEFGCSWS-NVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYT 297
Query: 633 WNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEM 692
+N +++ CK ++ A + + M G+ P+ T++S+++G + G+ E E+ +M
Sbjct: 298 FNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKL-GEVKEAVEVLDQM 356
Score = 43.1 bits (100), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 40/85 (47%)
Query: 502 GWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCY 561
G + +A D++ M G Y +L+ +A R + LLR + GI L Y
Sbjct: 554 GDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAY 613
Query: 562 EALLQSKIVQKDTPGALHLFKEMKE 586
++Q ++ T A++LF+EM E
Sbjct: 614 NPVIQGLFRKRKTTEAINLFREMLE 638
>gi|357115900|ref|XP_003559723.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g19290-like, partial [Brachypodium distachyon]
Length = 907
Score = 73.2 bits (178), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 76/310 (24%), Positives = 129/310 (41%), Gaps = 43/310 (13%)
Query: 447 LQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQ 506
L P Y LVK + + G+ +E ++K KEN ++ D+ A G +I G ++
Sbjct: 230 LSPNVVTYTLLVKGYCKEGRMEEAEK-VVKEIKENEKIVIDEVAYGALINGYCQRGRMED 288
Query: 507 AHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQ 566
A+ + DEM AGV+ + VY +++ Y + R EV LL+ G+ LD Y L+
Sbjct: 289 ANRVRDEMIDAGVQVNMFVYNTMINGYCKLGRMGEVEKLLQANEYRGVNLDEYSYNTLVD 348
Query: 567 S---------------KIVQKDTPGALHLFKEMKESKIPRSGHQE-----FEMLVKGCAQ 606
+V+ G + + R + F ML +G
Sbjct: 349 GYCRKGFMTKAFETCDMMVRNGFTGTTLTYNTLLNGFCSRGAIDDALKLWFLMLKRGVVP 408
Query: 607 NH-----------EAGLMAKLLQEVKE--GQRIDCGVHDWNNVIHFFCKKRLMQDAEKAL 653
N +AG + L KE + + V N VI+ CK R M +AE+
Sbjct: 409 NEISCSTLLDGFFKAGKTEQALNLWKETLARGLARNVVTINTVINGLCKNRRMTEAEELF 468
Query: 654 KRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEMKSFASSTSMNFDEELLDSVLY 713
RM+ ++ T+ +++ GY + G T++ EM++ S+ E+ +S
Sbjct: 469 HRMKEWSCPCDSLTYRTLIDGYCKL-GDLGRATQIRIEMENLGFVPSV----EMFNS--- 520
Query: 714 TFVRGGFFAR 723
F+ G F A+
Sbjct: 521 -FITGLFIAK 529
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 54/249 (21%), Positives = 101/249 (40%), Gaps = 6/249 (2%)
Query: 499 ISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDA 558
+ G + A + +M AG A + KAY R L++ G+ ++
Sbjct: 140 VQAGDIGTAVAVFQQMRCAGTLPDDFTVAIMAKAYCRDGRVAHAADFLKEMEEMGLDVNL 199
Query: 559 SCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQ 618
Y A++ T A L ++ + + + +LVKG + K+++
Sbjct: 200 VAYHAVMDGYCRIGQTEVARKLLHSLQVKGLSPN-VVTYTLLVKGYCKEGRMEEAEKVVK 258
Query: 619 EVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAI 678
E+KE ++I + +I+ +C++ M+DA + M G N +++M+ GY +
Sbjct: 259 EIKENEKIVIDEVAYGALINGYCQRGRMEDANRVRDEMIDAGVQVNMFVYNTMINGYCKL 318
Query: 679 GGKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFI 738
G+ EV +L +N DE ++++ + R GF +A E MM
Sbjct: 319 -GRMGEVEKLL----QANEYRGVNLDEYSYNTLVDGYCRKGFMTKAFETCDMMVRNGFTG 373
Query: 739 DKYKYRTLF 747
Y TL
Sbjct: 374 TTLTYNTLL 382
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 57/233 (24%), Positives = 104/233 (44%), Gaps = 12/233 (5%)
Query: 462 LEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQAHDLLDEMHLAGVRA 521
L GK + L ++ ++ + LG LC LG + A +L +++ + G
Sbjct: 625 LNIGKVAHIIESLAGGNHQSAKIMWNIVILG----LC-KLGRVADARNLFEDLKVKGFIP 679
Query: 522 SSSVYASLLKAYIEANRPREVTALLRDAR-SAGIQLDASCYEALLQSKIVQKDTPGALHL 580
+ Y+SL+ A+ ++ LRD SA + + Y +L+ + A+ L
Sbjct: 680 DNFTYSSLIHG-CSASGSIDLAFGLRDEMLSARLTPNIVTYNSLIYGLCKSCNVSRAVSL 738
Query: 581 FKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQE-VKEGQRIDCGVHDWNNVIHF 639
F +++ I + + L+ G ++ KL Q+ +KEG I V + +IH
Sbjct: 739 FNKLQSKGISPNA-ITYNTLIDGHCKDGNTTEAFKLKQKMIKEG--IQPTVFTYTILIHG 795
Query: 640 FCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEM 692
C + M++A K L +M PN T+ +++ GYA G +T+L+ EM
Sbjct: 796 LCTQGYMEEAIKLLDQMIENNVDPNFITYWTLIQGYARC-GNMKAITKLYNEM 847
>gi|359475765|ref|XP_002273555.2| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
mitochondrial-like [Vitis vinifera]
Length = 935
Score = 73.2 bits (178), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 108/467 (23%), Positives = 198/467 (42%), Gaps = 44/467 (9%)
Query: 251 PNTNTFNIALAGCLLFETTRKAEQLLDIMPRIGVKADSNLLIIMAHIYERNGRREELRKL 310
P+ ++ + G + A +LL+ M G+K + + + Y GR EE R+L
Sbjct: 347 PSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSTLIMGYASEGRIEEARRL 406
Query: 311 QRHIDEAVNLSDIQFRQF-YNCLLSCHLKFGDLNSASKMVLEMLQRA-KEARNSLAAAML 368
+ ++ S + F YN ++SC K G + AS +LE+ R K + A +L
Sbjct: 407 L----DGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFIL 462
Query: 369 PFNAVGVNNRTPSEQNVNCTNSVDLENSGIIENH----ILSYEDFTKDRKFVALEAEVKR 424
++ G T + + + ++ + G++ N+ +L F AL + R
Sbjct: 463 GYSKTG--KMTEAAKYFD-----EMLDHGLMPNNPLYTVLINGHFKAGNLMEALS--IFR 513
Query: 425 VLQTLLGMLQKQVELITTEHGILQPTE-KIYIKLVKAFLEAGKTKE-------LTHFLIK 476
L L G+L HG+L+ + +K+ E G + ++ F +
Sbjct: 514 HLHAL-GVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQ 572
Query: 477 AEKENLQVSHDDAAL-----------GHVITLCISLGWLDQAHDLLDEMHLAGVRASSSV 525
E E HD+ L V LC S G + +A L D M G+ S
Sbjct: 573 GEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKS-GDIQRARKLFDGMPEKGLEPDSVT 631
Query: 526 YASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMK 585
Y++++ Y ++ E +L + S G+Q + Y AL+ + D A++LF+EM
Sbjct: 632 YSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREML 691
Query: 586 ESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRL 645
+ + F L+ G ++ + ++L QE+ Q + V + VI + CK
Sbjct: 692 QKGFATT--LSFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHV-TYTTVIDWHCKAGK 748
Query: 646 MQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEM 692
M++A K M+ + + T+ S++ GY + G+ +EV L+ +M
Sbjct: 749 MEEANLLFKEMQERNLIVDTVTYTSLMYGYNKL-GQSSEVFALFEKM 794
Score = 62.8 bits (151), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 100/465 (21%), Positives = 188/465 (40%), Gaps = 29/465 (6%)
Query: 248 AMKPNTNTFNIALAGCLLFETTRKAEQLLDIMPRIGVKADSNLLIIMAHIYERNGRREEL 307
+ PNT T+ I AG + +A+ + M + G+K D N + + R G +E+
Sbjct: 204 GLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGDIDEV 263
Query: 308 RKLQRHIDEAVNLSDIQFRQFYNCLLSCHLKFGDLNSASKMVLEMLQRAKEARNSLAAAM 367
+++ D V+ YN L+ KFG + A++++ M+ + NS +
Sbjct: 264 LRIK---DVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKP-NSRTFCL 319
Query: 368 LPFNAVGVNNRTPSEQNVNCTNSVDLENS----GIIENHILSYEDFTKDRK------FVA 417
L +N + + ++ +L S G + N + +D + K F
Sbjct: 320 LIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSG 379
Query: 418 LEAEVKRVLQTLL------GMLQKQVELI--TTEHGILQPTEKIYIKLVKAFLEAGKTKE 469
L+ V V TL+ G +++ L+ + G+ P Y ++ +AGK +E
Sbjct: 380 LKPNV-VVYSTLIMGYASEGRIEEARRLLDGMSCSGV-APDIFCYNAIISCLSKAGKMEE 437
Query: 470 LTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASL 529
+ +L++ + L+ D G I G + +A DEM G+ ++ +Y L
Sbjct: 438 ASTYLLEIQGRGLK--PDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVL 495
Query: 530 LKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKI 589
+ + +A E ++ R + G+ D A + + AL +F E+KE +
Sbjct: 496 INGHFKAGNLMEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGL 555
Query: 590 PRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDA 649
+ L+ G + E +L E+ + I + +N ++ CK +Q A
Sbjct: 556 VPDVFT-YSSLISGFCKQGEVEKAFELHDEMCL-KGIAPNIFIYNALVDGLCKSGDIQRA 613
Query: 650 EKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEMKS 694
K M G P++ T+ +M+ GY E L+ EM S
Sbjct: 614 RKLFDGMPEKGLEPDSVTYSTMIDGYCK-SENVAEAFSLFHEMPS 657
>gi|242045792|ref|XP_002460767.1| hypothetical protein SORBIDRAFT_02g034620 [Sorghum bicolor]
gi|241924144|gb|EER97288.1| hypothetical protein SORBIDRAFT_02g034620 [Sorghum bicolor]
Length = 762
Score = 73.2 bits (178), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 68/294 (23%), Positives = 122/294 (41%), Gaps = 12/294 (4%)
Query: 454 YIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQAHDLLDE 513
Y L+K AG+ ++ + + D G +I +LG L+ A LLD+
Sbjct: 265 YNILLKVLCGAGRVEDARQLF-----DEMASPPDVVTYGILIHGYCALGELENAVKLLDD 319
Query: 514 MHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQKD 573
M GV +++VY S++ + R + ++ D + LD + Y +L + D
Sbjct: 320 MVARGVEPNATVYTSVVALLCDKGRVSDALTVVEDMVHHKVILDEAVYTTVLSGFCNKGD 379
Query: 574 TPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRIDCGVHDW 633
A F EM+ + G + L+ G + E K+LQE+ +R+D +
Sbjct: 380 LVSARRWFDEMQRKGLATDG-VTYTTLINGLCRAGELKEAEKVLQEML-ARRLDVDEVTY 437
Query: 634 NNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEMK 693
++ +CK+ M +A + M G PN T+ ++ G G EL EM
Sbjct: 438 TVLVDGYCKRGKMAEAFQVHNTMVQRGVAPNVVTYTALSDGLCK-QGDVQAANELLHEM- 495
Query: 694 SFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFIDKYKYRTLF 747
S+ + + +S++ + G+ +A +A M+ + D Y Y TL
Sbjct: 496 ---SNKGLELNACTYNSLINGLCKAGYLDQAMRTMADMDAAGLKPDVYTYTTLI 546
Score = 45.8 bits (107), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 100/506 (19%), Positives = 191/506 (37%), Gaps = 74/506 (14%)
Query: 180 LPVPASTILRKLVATEQYPPVTAWSAILAHMSLTA--------PGAYLAAELILEIGYLF 231
L +P++ +LR++ P A +A+L+ + L P + + IL + L
Sbjct: 215 LCLPSAPLLRRVRQYGISPSPEACNAVLSRLPLDEAIELFQGLPDKNVCSYNIL-LKVLC 273
Query: 232 QDGRV-DPRKKCNAPLIAMKPNTNTFNIALAGCLLFETTRKAEQLLDIMPRIGVKADSNL 290
GRV D R+ + +A P+ T+ I + G A +LLD M GV+ ++ +
Sbjct: 274 GAGRVEDARQLFDE--MASPPDVVTYGILIHGYCALGELENAVKLLDDMVARGVEPNATV 331
Query: 291 LIIMAHIYERNGRREELRKLQRHIDEAVNLSDIQFRQFYNCLLSCHLKFGDLNSASKMVL 350
+ + GR + + +++ V+ I Y +LS GDL SA +
Sbjct: 332 YTSVVALLCDKGRVSDALTV---VEDMVHHKVILDEAVYTTVLSGFCNKGDLVSARRWFD 388
Query: 351 EMLQRAKEARNSLAAAMLPFNAVGVNNRTPSEQNVNCTNSVDLENSGIIENHILSYEDFT 410
EM ++ L G+ +T
Sbjct: 389 EMQRKG------------------------------------LATDGVT---------YT 403
Query: 411 KDRKFVALEAEVKRVLQTLLGMLQKQVELITTEHGILQPTEKIYIKLVKAFLEAGKTKEL 470
+ E+K + L ML +++++ E Y LV + + GK E
Sbjct: 404 TLINGLCRAGELKEAEKVLQEMLARRLDV----------DEVTYTVLVDGYCKRGKMAEA 453
Query: 471 THFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLL 530
F + V+ + + G + A++LL EM G+ ++ Y SL+
Sbjct: 454 --FQVHNTMVQRGVAPNVVTYTALSDGLCKQGDVQAANELLHEMSNKGLELNACTYNSLI 511
Query: 531 KAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIP 590
+A + + D +AG++ D Y L+ + + A L +EM ++ I
Sbjct: 512 NGLCKAGYLDQAMRTMADMDAAGLKPDVYTYTTLIDALCKSGELDRAHDLLQEMLDNGI- 570
Query: 591 RSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAE 650
+ + +L+ G + KLL+ + E + I +N+++ +C M+
Sbjct: 571 KPTIVTYNVLMNGFCMSGRVEGGKKLLEWMLE-KNIHPNATTYNSLMKQYCIGNNMKSTT 629
Query: 651 KALKRMRSLGHLPNAQTFHSMVTGYA 676
+ K M S PN T++ ++ G+
Sbjct: 630 EIYKGMCSRNVEPNENTYNILIKGHC 655
>gi|356527777|ref|XP_003532484.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g21222-like [Glycine max]
Length = 583
Score = 72.8 bits (177), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 108/240 (45%), Gaps = 16/240 (6%)
Query: 442 TEHGILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISL 501
TE G +PT Y LV A + K + L K ++ D L +I
Sbjct: 49 TEEG-HKPTLITYTTLVAALTRQKRFKSIPALLSKVADNGMK--PDSILLNAMINAFSES 105
Query: 502 GWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRD-ARSAGIQLDASC 560
G +D+A + +M G + ++S Y +L+K + A RP E LL + ++ +
Sbjct: 106 GKVDEAMKIFQKMKEYGCKPTTSTYNTLIKGFGIAGRPYESMKLLEMMGQDENVKPNDRT 165
Query: 561 YEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQE- 619
Y L+Q+ +K A ++ +M S I + + + + AQN E +L+ +
Sbjct: 166 YNILIQAWCTKKKLEEAWNVLHKMVASGI-QPDVVTYNTMARAYAQNGETERAERLILKM 224
Query: 620 ----VKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGY 675
VK +R CG+ +I +CK+ M +A + L RM+ LG PN F+S++ GY
Sbjct: 225 PYNIVKPNERT-CGI-----IISGYCKEGNMPEALRFLYRMKELGVDPNPVVFNSLIKGY 278
Score = 53.9 bits (128), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/181 (21%), Positives = 80/181 (44%), Gaps = 1/181 (0%)
Query: 499 ISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDA 558
I G +A + + + G + + Y +L+ A R + + ALL G++ D+
Sbjct: 33 IGKGKPHEAQAVFNNLTEEGHKPTLITYTTLVAALTRQKRFKSIPALLSKVADNGMKPDS 92
Query: 559 SCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQ 618
A++ + A+ +F++MKE + + L+KG KLL+
Sbjct: 93 ILLNAMINAFSESGKVDEAMKIFQKMKEYGC-KPTTSTYNTLIKGFGIAGRPYESMKLLE 151
Query: 619 EVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAI 678
+ + + + +N +I +C K+ +++A L +M + G P+ T+++M YA
Sbjct: 152 MMGQDENVKPNDRTYNILIQAWCTKKKLEEAWNVLHKMVASGIQPDVVTYNTMARAYAQN 211
Query: 679 G 679
G
Sbjct: 212 G 212
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 61/310 (19%), Positives = 128/310 (41%), Gaps = 9/310 (2%)
Query: 447 LQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQ 506
+QP Y + +A+ + G+T+ ++K N+ V ++ G +I+ G + +
Sbjct: 194 IQPDVVTYNTMARAYAQNGETERAERLILKMPY-NI-VKPNERTCGIIISGYCKEGNMPE 251
Query: 507 AHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQ 566
A L M GV + V+ SL+K Y++ V L GI+ D + ++
Sbjct: 252 ALRFLYRMKELGVDPNPVVFNSLIKGYLDTTDTNGVDEALTLMEEFGIKPDVVTFSTIMN 311
Query: 567 SKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRI 626
+ +F +M ++ I H + +L KG + + LL + + +
Sbjct: 312 AWSSAGLMENCEEIFNDMVKAGIEPDIHA-YSILAKGYVRAGQPRKAEALLTSMSK-YGV 369
Query: 627 DCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVT 686
V + +I +C M A + ++M +G PN +T+ +++ GY + +
Sbjct: 370 QPNVVIFTTIISGWCAAGKMDRAFRLCEKMHEMGTSPNLKTYETLIWGYGEAKQPW-KAE 428
Query: 687 ELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFIDKYKYRTL 746
EL M+ M+ + + D+ + G F AN ++ EE ++ +
Sbjct: 429 ELLTTMEERGVVPEMSTMQLVADA----WRAIGLFKEANRILNGSEEESELDQEFDSDKI 484
Query: 747 FLKYHKTLYK 756
++ +++YK
Sbjct: 485 QVQSLESIYK 494
>gi|224103961|ref|XP_002313262.1| predicted protein [Populus trichocarpa]
gi|222849670|gb|EEE87217.1| predicted protein [Populus trichocarpa]
Length = 559
Score = 72.8 bits (177), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 68/271 (25%), Positives = 117/271 (43%), Gaps = 11/271 (4%)
Query: 433 LQKQVELITTEHGI-LQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAAL 491
L+K V+L+ G +P Y L+ + G+ +E L + +++ L+V D
Sbjct: 26 LEKAVDLLVEMEGSSCEPNSFTYCILMDGLCKEGRVEEAMRLLGEMKRKGLEV--DVVVY 83
Query: 492 GHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARS 551
+I+ S G LD+ L DEM G+ + VY+ L+ + + RE TA+L
Sbjct: 84 STLISGFCSKGCLDRGKALFDEMLEKGISPNVVVYSCLINGFCKKGLWREATAVLHTMTE 143
Query: 552 AGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAG 611
GIQ D Y ++ AL LF M E K + +L+ G + G
Sbjct: 144 RGIQPDVYTYTCMIGGLCKDGRARKALDLFDLMTE-KGEEPSTVTYNVLINGLCKEGCIG 202
Query: 612 LMAKLLQEVKE-GQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHL--PNAQTF 668
K+ + + E G+R++ V +N +I C + +A K + G+ P+ TF
Sbjct: 203 DAFKIFETMLEKGKRLE--VVSYNTLIMGLCNNGKLDEAMKLFSSLLEDGNYVEPDVITF 260
Query: 669 HSMVTGYAAIG--GKYTEVTELWGEMKSFAS 697
++++ G G K E+ + E SF +
Sbjct: 261 NTVIQGLCKEGRLDKAVEIYDTMIERGSFGN 291
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 49/219 (22%), Positives = 100/219 (45%), Gaps = 10/219 (4%)
Query: 499 ISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDA 558
I G +D+A +L +H G+ SS+ Y+ ++ + + + L + +G+
Sbjct: 303 IKSGIIDKAMELWKRVHKLGLVPSSTTYSVMIDGFCKMHMLNFAKGLFSRMKISGLSPTL 362
Query: 559 SCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQ 618
Y L+ S + A LF+EMKES F +++ G + + +LL
Sbjct: 363 FDYNTLMASLCKESSLEQARRLFQEMKESNC-EPDTISFNIMIDGTLKAGDIHSAKELLN 421
Query: 619 EVKE-GQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAA 677
++++ G D + +++ I+ K M++A+ A M + G P+ + S++ G+
Sbjct: 422 DMQQMGLTPD--AYTYSSFINRLSKLGQMEEAKGAFDSMIASGITPDNHVYDSLIKGF-- 477
Query: 678 IGGKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFV 716
G E+ E+ ++ A + D E+ +S+L TF+
Sbjct: 478 --GLNDEIEEVINLLRQMA-DMGVILDLEITNSIL-TFL 512
>gi|449523421|ref|XP_004168722.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
mitochondrial-like [Cucumis sativus]
Length = 628
Score = 72.4 bits (176), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 70/331 (21%), Positives = 144/331 (43%), Gaps = 26/331 (7%)
Query: 431 GMLQKQVELIT-TEHGILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDA 489
G L+K + + E ++P Y +V + +G+ + L +++ ++ D
Sbjct: 235 GKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSSGRVEAADAILTTMKRQ--KIEPDSF 292
Query: 490 ALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDA 549
G +I+ G L++A + +EM G+R S+ +Y +L+ + +A +
Sbjct: 293 TYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLIDGFCNKGNLDMASAYKDEM 352
Query: 550 RSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKG---CAQ 606
GI S Y +L+ + +++ T A + KE++E I + +L+ G CA
Sbjct: 353 LKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGISPDAIT-YNILINGYCRCAN 411
Query: 607 NHEAGLMAK--LLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPN 664
+A L+ L +K ++ + +++H KK M++A+ K++ S G LP+
Sbjct: 412 AKKAFLLHDEMLASGIKPTKKT------YTSLLHVLSKKNRMKEADDLFKKITSEGVLPD 465
Query: 665 AQTFHSMVTGYAA---IGGKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFF 721
A F++++ G+ + + G + EL +M DE ++++ R G
Sbjct: 466 AIMFNALIDGHCSNSNVKGAF----ELLKDMDRMKVPP----DEVTFNTIMQGHCREGKV 517
Query: 722 ARANEVVAMMEEGKMFIDKYKYRTLFLKYHK 752
A E+ M+ + D + TL Y +
Sbjct: 518 EEARELFDEMKRRGIKPDHISFNTLISGYSR 548
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 99/230 (43%), Gaps = 8/230 (3%)
Query: 447 LQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQ 506
+ PT Y L+ A +T E +IK +E +S D +I +
Sbjct: 357 ISPTMSTYNSLIHALFMEQRTDE-AECMIKEIQEK-GISPDAITYNILINGYCRCANAKK 414
Query: 507 AHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQ 566
A L DEM +G++ + Y SLL + NR +E L + S G+ DA + AL+
Sbjct: 415 AFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEADDLFKKITSEGVLPDAIMFNALID 474
Query: 567 SKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVK-EGQR 625
+ GA L K+M K+P F +++G + + +L E+K G +
Sbjct: 475 GHCSNSNVKGAFELLKDMDRMKVP-PDEVTFNTIMQGHCREGKVEEARELFDEMKRRGIK 533
Query: 626 IDCGVH-DWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTG 674
D H +N +I + ++ ++DA + M G P T++++V G
Sbjct: 534 PD---HISFNTLISGYSRRGDIKDAFRVRNEMLDTGFNPTVLTYNALVQG 580
Score = 45.1 bits (105), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 81/384 (21%), Positives = 146/384 (38%), Gaps = 33/384 (8%)
Query: 248 AMKPNTNTFNIALAGCLLFETTRKAEQLLDIMPRIGVKADSNLLIIMAHIYERNGRREEL 307
+KPN T+N + G A+ +L M R ++ DS + + GR EE
Sbjct: 251 GVKPNIVTYNTIVHGYCSSGRVEAADAILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEA 310
Query: 308 RKL-QRHIDEAVNLSDIQFRQFYNCLLSCHLKFGDLNSASKMVLEMLQRAKEARNSLAAA 366
K+ + + + + S + YN L+ G+L+ AS EML++ S +
Sbjct: 311 SKIFEEMVQKGLRPSAV----IYNTLIDGFCNKGNLDMASAYKDEMLKKGISPTMSTYNS 366
Query: 367 MLPFNAVGVNNRTP-SEQNVNCTNSVDLENSGIIENHILS-YEDFTKDRKFVALEAEVKR 424
++ +A+ + RT +E + + I N +++ Y +K L E
Sbjct: 367 LI--HALFMEQRTDEAECMIKEIQEKGISPDAITYNILINGYCRCANAKKAFLLHDE--- 421
Query: 425 VLQTLLGMLQKQVELITTEHGILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQV 484
ML + +PT+K Y L+ + + KE K E V
Sbjct: 422 -------MLASGI----------KPTKKTYTSLLHVLSKKNRMKEADDLFKKITSEG--V 462
Query: 485 SHDDAALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTA 544
D +I S + A +LL +M V + ++++ + + E
Sbjct: 463 LPDAIMFNALIDGHCSNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQGHCREGKVEEARE 522
Query: 545 LLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGC 604
L + + GI+ D + L+ + D A + EM ++ + LV+G
Sbjct: 523 LFDEMKRRGIKPDHISFNTLISGYSRRGDIKDAFRVRNEMLDTGF-NPTVLTYNALVQGL 581
Query: 605 AQNHEAGLMAKLLQE-VKEGQRID 627
+N E L +LL+E V +G D
Sbjct: 582 CKNQEGDLAEELLKEMVSKGMTPD 605
Score = 39.7 bits (91), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 45/234 (19%), Positives = 93/234 (39%), Gaps = 7/234 (2%)
Query: 449 PTEKIYIKLVKAFLEAGKT---KELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLD 505
P+ K + L++ L G T +E+ FL A ++ L ++I C + D
Sbjct: 111 PSPKPALHLLRQALGGGTTNSIREIFEFL-AASRDRLGFK-SSIVFDYLIKSCCDMNRAD 168
Query: 506 QAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALL 565
+A + M GV + SLL +++ NR L + I+ + ++
Sbjct: 169 EAFECFYTMKEKGVLPTIETCNSLLSLFLKLNRTEAAWVLYAEMFRLRIKSSVYTFNIMI 228
Query: 566 QSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQR 625
+ A M+ S + + + +V G + +L +K Q+
Sbjct: 229 NVLCKEGKLKKAKDFVGHMETSGV-KPNIVTYNTIVHGYCSSGRVEAADAILTTMKR-QK 286
Query: 626 IDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIG 679
I+ + ++I CK+ +++A K + M G P+A +++++ G+ G
Sbjct: 287 IEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLIDGFCNKG 340
>gi|449507709|ref|XP_004163108.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
mitochondrial-like [Cucumis sativus]
Length = 999
Score = 72.4 bits (176), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 98/448 (21%), Positives = 188/448 (41%), Gaps = 31/448 (6%)
Query: 249 MKPNTNTFNIALAGCLLFETTRKAEQLLDIMPRIGVKADSNLLIIMAHIYERNGRREELR 308
+ P+ T+++ ++G +KA ++LD M R GVK + + + Y + R E
Sbjct: 447 LTPSPFTYSVLISGLCHSSDLQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAI 506
Query: 309 KLQRHIDEAVNLSDIQFRQFYNCLLSCHLKFGDLNSASKMVLEMLQRAKEARNSLAAAML 368
+L + + L D+ YNCL+ + + A ++++M ++ + A +
Sbjct: 507 ELLKIMIANGVLPDLFC---YNCLIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFI 563
Query: 369 PFNAVGVNNRTPSEQNVNCTNSVDLENSGIIENHILSYEDFTKDRKFVALEAEVKRVLQT 428
+ E V D+ +SGI+ N+++ Y K V E L T
Sbjct: 564 NLYS------KSGEIQVAERYFKDMLSSGIVPNNVI-YTILIKGHCDVGNTVEA---LST 613
Query: 429 LLGMLQKQVELITTEHGILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDD 488
ML+K L P + Y ++ + + GKTKE +K K V D
Sbjct: 614 FKCMLEKG----------LIPDIRAYSAIIHSLSKNGKTKEAMGVFLKFLKTG--VVPDV 661
Query: 489 AALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLK--AYIEANRPREVTALL 546
+I+ G +++A L DEM G+ + VY +L+ Y ++ E L
Sbjct: 662 FLYNSLISGFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLINDYGYCKSGNLTEAFKLF 721
Query: 547 RDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQ 606
+ S GI D Y L+ + + AL LF E ++ + F L+ +
Sbjct: 722 DEMISKGISPDGYIYCILIDGCGKEGNLEKALSLFHEAQQKSV--GSLSAFNSLIDSFCK 779
Query: 607 NHEAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQ 666
H + A+ L + +++ + + +I + K +M++AE+ M + +PN
Sbjct: 780 -HGKVIEARELFDDMVDKKLTPNIVTYTILIDAYGKAEMMEEAEQLFLDMETRNIIPNTL 838
Query: 667 TFHSMVTGYAAIGGKYTEVTELWGEMKS 694
T+ S++ Y IG ++ ++ L+ +M++
Sbjct: 839 TYTSLLLSYNQIGNRFKMIS-LFKDMEA 865
Score = 47.4 bits (111), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 53/240 (22%), Positives = 106/240 (44%), Gaps = 7/240 (2%)
Query: 436 QVELITTEHGILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVI 495
+V+ + E G L P Y LV F + ++KE LI + ++ + +I
Sbjct: 297 EVKKLMMEKG-LGPDGHTYTLLVDGFCKQKRSKEAK--LIFESMPSSGLNPNRFTYTALI 353
Query: 496 TLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQ 555
I G +++A + DEM G++ + Y +++ +A + +L + AGI+
Sbjct: 354 DGFIKEGNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNEMLMAGIE 413
Query: 556 LDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAK 615
D Y L+ + D A L EMK K+ S + +L+ G + + +
Sbjct: 414 PDTWTYNLLIDGYLKSHDMAKACELLAEMKARKLTPSPFT-YSVLISGLCHSSDLQKANE 472
Query: 616 LL-QEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTG 674
+L Q ++ G + + V + +I + ++ + A + LK M + G LP+ ++ ++ G
Sbjct: 473 VLDQMIRNGVKPN--VFMYGTLIKAYVQESRYEMAIELLKIMIANGVLPDLFCYNCLIIG 530
>gi|255555231|ref|XP_002518652.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223542033|gb|EEF43577.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 827
Score = 72.4 bits (176), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/300 (20%), Positives = 123/300 (41%), Gaps = 38/300 (12%)
Query: 484 VSHDDAALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVT 543
V+ DD +I+ C ++A + +EM L+G + +LL Y ++ RP+E
Sbjct: 284 VAPDDYTYNTLISCCRRGSLYEEAAQVFEEMKLSGFSPDKVTFNTLLDVYGKSRRPKEAM 343
Query: 544 ALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIP------------- 590
+L++ +G Y +L+ + A+ L +M E I
Sbjct: 344 EVLKEMEFSGFSPSIVTYNSLISAYARDGLLREAMELKDQMVEKGIKPDVFTYTTLLSGF 403
Query: 591 -RSGHQE------FEMLVKGCAQN-----------HEAGLMAKLLQEVKEGQRIDCG--V 630
++G E EM GC N G A++++ +E + +C +
Sbjct: 404 EKAGMDEPAMRIFGEMRAAGCKPNICTFNALIKMHGNRGRFAEMMKVFEEIEICNCAPDI 463
Query: 631 HDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWG 690
WN ++ F + + + K M+ G +P TF+++++ Y+ G + + ++
Sbjct: 464 VTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERDTFNTLISAYSRCGS-FQQAMAVYK 522
Query: 691 EMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFIDKYKYRTLFLKY 750
M + D ++VL RGG + ++ +V A M++G+ ++ Y +L Y
Sbjct: 523 RML----EAGVTPDLSSYNAVLAALARGGLWEQSEKVFAEMKDGRCKPNELTYCSLLHAY 578
Score = 45.1 bits (105), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 44/207 (21%), Positives = 87/207 (42%), Gaps = 11/207 (5%)
Query: 478 EKENLQVSHDDAALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEAN 537
E+E+ + + + + +IT+ G + A +L+ + G Y SL+ AY
Sbjct: 172 EREDFESVLNCSVVAVIITMLGKEGKVSAASSILNNLRKDGFDLDVYAYTSLITAYASNG 231
Query: 538 RPREVTALLRDARSAGIQLDASCYEALL----QSKIVQKDTPGALHLFKEMKESKIPRSG 593
R R+ + + G + Y +L + + G +H MK S +
Sbjct: 232 RYRDAVLVFKKMEEEGCKPTLITYNVILNVYGKMGMPWSKISGLVH---GMKSSGVAPDD 288
Query: 594 HQEFEMLVKGCAQNHEAGLMAKLLQEVK-EGQRIDCGVHDWNNVIHFFCKKRLMQDAEKA 652
+ + L+ C + A++ +E+K G D +N ++ + K R ++A +
Sbjct: 289 YT-YNTLISCCRRGSLYEEAAQVFEEMKLSGFSPDKVT--FNTLLDVYGKSRRPKEAMEV 345
Query: 653 LKRMRSLGHLPNAQTFHSMVTGYAAIG 679
LK M G P+ T++S+++ YA G
Sbjct: 346 LKEMEFSGFSPSIVTYNSLISAYARDG 372
>gi|297809467|ref|XP_002872617.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297318454|gb|EFH48876.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 584
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/242 (26%), Positives = 110/242 (45%), Gaps = 9/242 (3%)
Query: 443 EHGILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVIT-LCISL 501
EHG+ P Y ++ + G+TK+ F + E VS + +I LC +
Sbjct: 261 EHGVF-PNLHTYNCVMNQLCKDGRTKD--AFKVFDEMRERGVSCNIVTYNTLIGGLCREM 317
Query: 502 GWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCY 561
++A++++D+M G+ + Y +L+ + + + +L RD +S G+ Y
Sbjct: 318 K-ANEANEVMDQMKSDGINPNLITYNTLIDGFCGVRKLGKALSLCRDLKSRGLSPSLVTY 376
Query: 562 EALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVK 621
L+ + DT GA + KEM+E I S + +L+ A++ +L ++
Sbjct: 377 NILVSGFCKKGDTSGAGKVVKEMEERGIKPS-KVTYTILIDTFARSDNMEKAIQLRSSME 435
Query: 622 E-GQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGG 680
E G D VH ++ +IH FC K M +A + K M PN +++MV GY G
Sbjct: 436 ELGLTPD--VHTYSVLIHGFCIKGRMNEASRLFKSMVEKKFEPNEVIYNTMVLGYCKEGS 493
Query: 681 KY 682
Y
Sbjct: 494 SY 495
Score = 44.7 bits (104), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 83/420 (19%), Positives = 152/420 (36%), Gaps = 66/420 (15%)
Query: 247 IAMKPNTNTFNIALAGCLLFETTRKAEQLLDIMPRIGVKADSNLLIIMAHIYERNGRREE 306
PN + + GC KA+ L M + G+ A+ ++ H +NG +++
Sbjct: 192 FGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQ 251
Query: 307 LRKLQRHIDEAVNLSDIQFRQFYNCLLSCHLKFGDLNSASKMVLEMLQRAKEARNSLAAA 366
++ + E ++ YNC+++ K G A K+ EM +R ++
Sbjct: 252 GFEMYEKMQEHGVFPNLHT---YNCVMNQLCKDGRTKDAFKVFDEMRERG------VSCN 302
Query: 367 MLPFNA-VGVNNRTPSEQNVNCTNSV-DLENSGIIENHILSYEDFTKDRKFVALEAEVKR 424
++ +N +G R E N N V D S I ++++Y F + R
Sbjct: 303 IVTYNTLIGGLCR---EMKANEANEVMDQMKSDGINPNLITYNTLIDG--FCGV-----R 352
Query: 425 VLQTLLGMLQKQVELITTEHGILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQV 484
L L + + G L P+ Y LV F + G
Sbjct: 353 KLGKALSLCRD-----LKSRG-LSPSLVTYNILVSGFCKKG------------------- 387
Query: 485 SHDDAALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTA 544
D + G V+ EM G++ S Y L+ + ++ +
Sbjct: 388 --DTSGAGKVV----------------KEMEERGIKPSKVTYTILIDTFARSDNMEKAIQ 429
Query: 545 LLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGC 604
L G+ D Y L+ ++ A LFK M E K + +V G
Sbjct: 430 LRSSMEELGLTPDVHTYSVLIHGFCIKGRMNEASRLFKSMVEKKF-EPNEVIYNTMVLGY 488
Query: 605 AQNHEAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPN 664
+ + +L +E++E + + V + +I CK+R ++AE +++M G P+
Sbjct: 489 CKEGSSYRALRLFREMEE-KELPPNVASYRYMIEVLCKERKSKEAEGLVEKMIDSGIGPS 547
>gi|255540069|ref|XP_002511099.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223550214|gb|EEF51701.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 1151
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 74/313 (23%), Positives = 140/313 (44%), Gaps = 19/313 (6%)
Query: 445 GILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKE----NLQVSHDDAALGHVITLCIS 500
G + P Y L+ A+ GK +E H L E++ NL V++ G LC +
Sbjct: 226 GAIVPDVYTYTNLINAYCRVGKVEEGKHVLFDMEEKGCIPNL-VTYSVVIAG----LCRA 280
Query: 501 LGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASC 560
G +D+A +L M G+ + +YA+L+ + R E ++L + + G++ D
Sbjct: 281 -GDVDEALELKRSMANKGLLPDNYIYATLIDGFCRQKRSTEGKSMLDEMYTMGLKPDHVA 339
Query: 561 YEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEV 620
Y AL+ + Q D GA + +EM KI + + L+ G + + L E+
Sbjct: 340 YTALINGFVKQSDIGGAFQVKEEMFARKIKLNTFTYYA-LIHGLCKIGDLEKAEDLFSEM 398
Query: 621 K-EGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIG 679
G + D + +N +I + K + M+ A + L ++ NA ++V G
Sbjct: 399 TMMGIKPD--IQTYNCLIEGYYKVQNMEKAYELLIEIKKENLTANAYMCGAIVNGLCHC- 455
Query: 680 GKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFID 739
G T EL+ EM S+ ++ + +++ V+ G F A +++ +M++ + D
Sbjct: 456 GDLTRANELFQEMISWGLKPNI----VIYTTIVKGLVKEGRFEEAIKILGVMKDQGLSPD 511
Query: 740 KYKYRTLFLKYHK 752
+ Y T+ + + K
Sbjct: 512 VFCYNTVIIGFCK 524
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 74/328 (22%), Positives = 126/328 (38%), Gaps = 43/328 (13%)
Query: 447 LQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQ 506
L+P Y L+ F++ F +K E ++ + +I +G L++
Sbjct: 333 LKPDHVAYTALINGFVKQSDIG--GAFQVKEEMFARKIKLNTFTYYALIHGLCKIGDLEK 390
Query: 507 AHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQ 566
A DL EM + G++ Y L++ Y + + LL + + + +A A++
Sbjct: 391 AEDLFSEMTMMGIKPDIQTYNCLIEGYYKVQNMEKAYELLIEIKKENLTANAYMCGAIVN 450
Query: 567 SKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRI 626
D A LF+EM + + + +VKG + K+L +K+ Q +
Sbjct: 451 GLCHCGDLTRANELFQEMISWGL-KPNIVIYTTIVKGLVKEGRFEEAIKILGVMKD-QGL 508
Query: 627 DCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVT 686
V +N VI FCK M++ + L M + G PN T+ + + GY G
Sbjct: 509 SPDVFCYNTVIIGFCKAGKMEEGKSYLVEMIAKGLKPNVYTYGAFIHGYCRAG------- 561
Query: 687 ELWGEMKSFASSTSMNFDEELLDS------VLYTFVRGGFFARANEVVAMMEEGKMFIDK 740
E+ +SF E+LDS V+ T + G+ N A
Sbjct: 562 EMQAAERSFI---------EMLDSGIAPNDVICTDLIDGYCKDGNTTKA----------- 601
Query: 741 YKYRTLFLKYHKTLYKGKTPKFQTEAQL 768
F K+ L +G P QT + L
Sbjct: 602 ------FAKFRCMLDQGVLPDVQTHSVL 623
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 90/198 (45%), Gaps = 9/198 (4%)
Query: 497 LCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQL 556
LC LG + +A +L D + G+ +S Y++++ Y ++ E L + G+
Sbjct: 697 LC-KLGEIAKARELFDGIPEKGLARNSVTYSTIIAGYCKSANLTEAFQLFHGMKLVGVPP 755
Query: 557 DASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKL 616
D+ Y AL+ +T AL LF M E I + F L+ G + G + +
Sbjct: 756 DSFVYCALIDGCCKAGNTEKALSLFLGMVEEGIAST--PAFNALIDGF---FKLGKLIEA 810
Query: 617 LQEVKE--GQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTG 674
Q V++ I + +I + C +++AE+ M+ +PN T+ S++ G
Sbjct: 811 YQLVEDMVDNHITPNHVTYTILIEYHCTVGNIKEAEQLFMEMQKRNVMPNVLTYTSLLHG 870
Query: 675 YAAIGGKYTEVTELWGEM 692
Y I G+ +E+ L+ EM
Sbjct: 871 YNRI-GRRSEMFSLFDEM 887
Score = 41.6 bits (96), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 83/388 (21%), Positives = 149/388 (38%), Gaps = 45/388 (11%)
Query: 174 GLSKCGLPVPASTILRKLVATEQYPPVTAWSAILAHMSLTAPGAYLAAELILEIGYLFQD 233
GLSK G A + +L+ P V +++++++ L E L+ + D
Sbjct: 626 GLSKNGKLQEAMGVFSELLDKGLVPDVFTYTSLISN---------LCKEGDLKAAFELHD 676
Query: 234 GRVDPRKKCNAPLIAMKPNTNTFNIALAGCLLFETTRKAEQLLDIMPRIGVKADSNLLII 293
D KK + PN T+N + G KA +L D +P G+ +S
Sbjct: 677 ---DMCKK------GINPNIVTYNALINGLCKLGEIAKARELFDGIPEKGLARNSVTYST 727
Query: 294 MAHIYERNGRREELRKLQRHIDEAVNLSDIQFRQFYNCLLSCHLKFGDLNSASKMVLEML 353
+ Y ++ E +L H + V + F Y L+ K G+ A + L M+
Sbjct: 728 IIAGYCKSANLTEAFQL-FHGMKLVGVPPDSF--VYCALIDGCCKAGNTEKALSLFLGMV 784
Query: 354 QRAKEARNSLAAAMLPFNAVGVNNRTPSEQNVNCTNSVDLENSGIIENHILSYEDFTKDR 413
+ + + A + F +G + Q V D+ ++ I NH+ +T
Sbjct: 785 EEGIASTPAFNALIDGFFKLG--KLIEAYQLVE-----DMVDNHITPNHV----TYTILI 833
Query: 414 KFVALEAEVKRVLQTLLGMLQKQVELITTEHGILQPTEKIYIKLVKAFLEAGKTKELTHF 473
++ +K Q + M ++ V P Y L+ + G+ E+ F
Sbjct: 834 EYHCTVGNIKEAEQLFMEMQKRNV----------MPNVLTYTSLLHGYNRIGRRSEM--F 881
Query: 474 LIKAEKENLQVSHDDAALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAY 533
+ E + DD A ++ + G +A L+D+M GV ++Y L+ A
Sbjct: 882 SLFDEMVARGIKPDDLAWSVMVDAHLKEGNWIKALKLVDDMLSEGVNVCKNLYTILIDAL 941
Query: 534 IEANRPREVTALLRDARSAGIQLD-ASC 560
+ N EV +L + G +L A+C
Sbjct: 942 CKHNNLSEVLKVLDEVEKQGSKLSLATC 969
>gi|222623994|gb|EEE58126.1| hypothetical protein OsJ_09025 [Oryza sativa Japonica Group]
Length = 1269
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 77/330 (23%), Positives = 152/330 (46%), Gaps = 25/330 (7%)
Query: 454 YIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVIT-LCISLGWLDQAHDLLD 512
Y L+ +G +E F K + E+ + D G +I LC S ++A LLD
Sbjct: 260 YNVLIAGLCRSGAVEE--AFGFKKDMEDYGLVPDGFTYGALINGLCKSR-RSNEAKALLD 316
Query: 513 EMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQS--KIV 570
EM A ++ + VYA+L+ ++ E ++++ +AG+Q + Y+ L++ K+
Sbjct: 317 EMSCAELKPNVVVYANLIDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMG 376
Query: 571 QKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRIDCGV 630
Q D +L L + +++S P + + ++++G ++H +LL E+ E I V
Sbjct: 377 QMDR-ASLLLKQMVRDSHRPDT--ITYNLIIEGHFRHHSKKDAFRLLSEM-ENAGISPNV 432
Query: 631 HDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWG 690
+ ++ +IH C+ + A L+ M + G PNA + +++GY G + E++
Sbjct: 433 YTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCR-EGNVSLACEIFD 491
Query: 691 EMKSFASSTSMNFDEEL--LDSVLYTFVRGGFFARANEVVAMMEEGKMFIDKYKYRTLFL 748
+M T +N +L +S+++ + G + + A M+E + +++ Y L
Sbjct: 492 KM------TKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIH 545
Query: 749 KYHKTLYKGKTPKFQTEAQLKKREAALGFK 778
Y K ++ QL +R G K
Sbjct: 546 GYL------KNGDLESAEQLVQRMLDTGLK 569
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 102/466 (21%), Positives = 188/466 (40%), Gaps = 32/466 (6%)
Query: 248 AMKPNTNTFNIALAGCLLFETTRKAEQLLDIMPRIGVKADSNLLIIMAHIYERNGRREEL 307
+ PN T++I + G KA LL+ M G+K ++ + + Y R G
Sbjct: 427 GISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLA 486
Query: 308 RKLQRHIDEAVNLSDIQFRQFYNCLLSCHLKFGDLNSASKMVLEMLQRAKEARNSLAAAM 367
++ + + L D+ YN L+ K G + ++K +M +R N +
Sbjct: 487 CEIFDKMTKVNVLPDLYC---YNSLIFGLSKVGRVEESTKYFAQMQERGL-LPNEFTYSG 542
Query: 368 LPFNAVGVNNRTPSEQNVNCTNSVDLENSGIIENHIL-SYEDFTKDRKFVALEAEVKRVL 426
L + + +EQ V L+ + +I +L SY F D ++++V
Sbjct: 543 LIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESY--FKSD--------DIEKVS 592
Query: 427 QTLLGMLQKQVELITTEHGILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSH 486
T ML + V L +IY L+ +G + L EK N V
Sbjct: 593 STFKSMLDQGVML----------DNRIYGILIHNLSSSGNMEAAFRVLSGIEK-NGSVPD 641
Query: 487 DDAALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALL 546
+ LC + ++A +LDEM GV + Y +L+ ++ +
Sbjct: 642 VHVYSSLISGLCKTADR-EKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVF 700
Query: 547 RDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQ 606
+ G+ + Y +L+ D A +L+ EM + I + +L GC+
Sbjct: 701 NSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFV-YSVLTTGCSS 759
Query: 607 NHEAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQ 666
+ L++E+ R + +NN++ FCK+ MQ+ K L + G +PNA
Sbjct: 760 AGDLEQAMFLIEEMF--LRGHASISSFNNLVDGFCKRGKMQETLKLLHVIMGRGLVPNAL 817
Query: 667 TFHSMVTGYAAIGGKYTEVTELWGEMKSFAS-STSMNFDEELLDSV 711
T ++++G + GK +EV ++ E++ S S + +F +D +
Sbjct: 818 TIENIISGLSE-AGKLSEVHTIFVELQQKTSESAARHFSSLFMDMI 862
>gi|299471432|emb|CBN79384.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 962
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 86/340 (25%), Positives = 148/340 (43%), Gaps = 31/340 (9%)
Query: 252 NTNTFNIALAGCLLFETTRKAEQLLDIM-PRIGVKADSNLLIIMAHIYERNGRREELRKL 310
N +N A+A R+AE LL +M R + D+ + + R G + R+L
Sbjct: 56 NVYIYNTAIAAMARCGRPREAEALLTVMLERDSIAPDTISYNSAINGHARCGDLDAARRL 115
Query: 311 QRHIDE-AVNLSDIQFRQF-YNCLLSCHLKFGDLNSASKMVLEMLQRAKEARNSLAAAML 368
+ E A + + QF YN + + K GD +A++ VL+M+ A N ++
Sbjct: 116 LGRMTELASGGALLHPDQFTYNAVANAAAKRGDAVAAAE-VLKMMAEAGVTPN-----II 169
Query: 369 PFNAVGVNNRTPSEQNVNCTNSVDLENSGIIENHILSYEDFTKD-RKFVAL--EAEVKRV 425
+N+ C DL + ++ I+ + D R + A A ++ +
Sbjct: 170 TYNSC----------LAACKAKGDLRRA-VVLLEIMREDGIDPDQRSYSAAIATAGIRGL 218
Query: 426 LQTLLGMLQKQVELITTEHGILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVS 485
+ + G L+ T L P + +KA + G+ F + AE +N ++
Sbjct: 219 WEEVQGFLE------TMREEDLTPDTVTFNTAIKAVADNGQCD--VAFSLLAEMKNEGLT 270
Query: 486 HDDAALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTAL 545
D + V+ C + G A LL++M AGV ++ Y++ + A +A R RE AL
Sbjct: 271 PDQISYNGVLGACGNAGEWKAALRLLEDMRQAGVTPNAYNYSAAMDACGKAGRQREALAL 330
Query: 546 LRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMK 585
L R AG++ D +CY A + + V D A+ L +EMK
Sbjct: 331 LGHMRKAGVRADTACYNAAIDACSVAMDWTAAVQLLQEMK 370
>gi|449438627|ref|XP_004137089.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g02860-like [Cucumis sativus]
Length = 831
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/301 (20%), Positives = 128/301 (42%), Gaps = 40/301 (13%)
Query: 484 VSHDDAALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVT 543
V+ D +I+ C ++A ++ +EM AG Y +LL Y ++ RPRE
Sbjct: 287 VAPDLYTYNTLISSCRRGSLYEEAAEVFEEMKAAGFSPDKVTYNALLDVYGKSRRPREAM 346
Query: 544 ALLRDARSAGIQLDASCYEAL---------------LQSKIVQKDTPGALHLFKEMKESK 588
+L++ ++G Y +L L+S++V+K + + + S
Sbjct: 347 EVLKEMEASGFAPSIVTYNSLISAYARDGLLDEAMELKSQMVKKGIKPDVFTYTTLL-SG 405
Query: 589 IPRSGHQEF------EMLVKGCAQN-----------HEAGLMAKLLQEVKEGQRIDC--G 629
++G ++ EM V GC N G ++++ +E + +C
Sbjct: 406 FEKTGKDDYAMKVFEEMRVAGCQPNICTFNALIKMHGNRGNFVEMMKVFEEIKICECVPD 465
Query: 630 VHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELW 689
+ WN ++ F + + + K M+ G +P TF+++++ Y+ G + + ++
Sbjct: 466 IVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERDTFNTLISAYSRCGF-FDQAMAIY 524
Query: 690 GEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFIDKYKYRTLFLK 749
M + D ++VL RGG + ++ +V+A M++G+ ++ Y +L
Sbjct: 525 RRML----DAGVTPDLSTYNAVLAALARGGLWEQSEKVLAEMKDGRCKPNELTYCSLLHA 580
Query: 750 Y 750
Y
Sbjct: 581 Y 581
Score = 47.4 bits (111), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 54/279 (19%), Positives = 101/279 (36%), Gaps = 32/279 (11%)
Query: 502 GWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCY 561
G + + EM AG + +L+ AY + A+ R AG+ D S Y
Sbjct: 480 GMDSEVSGVFKEMKRAGFVPERDTFNTLISAYSRCGFFDQAMAIYRRMLDAGVTPDLSTY 539
Query: 562 EALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVK 621
A+L + + + EMK+ + + + L+ A E M+ L +E+
Sbjct: 540 NAVLAALARGGLWEQSEKVLAEMKDGRC-KPNELTYCSLLHAYANGKEVERMSALAEEIY 598
Query: 622 EGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVT-------- 673
G I+ ++ + K L+ + E+A +R G P+ T ++MV+
Sbjct: 599 SGI-IEPQAVLLKTLVLVYSKSDLLTETERAFLELREQGFSPDITTLNAMVSIYGRRRMV 657
Query: 674 -------------GYAAIGGKYTEVTELWGEMKSFASS---------TSMNFDEELLDSV 711
G+ Y + ++ + F S M D ++V
Sbjct: 658 SKTNEILNFIKDSGFTPSLTTYNSLMYMYSRTEHFEKSEDILREIIAKGMKPDIISFNTV 717
Query: 712 LYTFVRGGFFARANEVVAMMEEGKMFIDKYKYRTLFLKY 750
++ + R G A+ + A M++ + D Y T Y
Sbjct: 718 IFAYCRNGRMKEASRIFAEMKDFGLAPDVITYNTFIASY 756
>gi|222636666|gb|EEE66798.1| hypothetical protein OsJ_23544 [Oryza sativa Japonica Group]
Length = 665
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 100/499 (20%), Positives = 208/499 (41%), Gaps = 48/499 (9%)
Query: 248 AMKPNTNTFNIALAGCLLFETTRKAEQLLDIMPRIGVKAD--SNLLIIMAHIYERNGRRE 305
A+ P T+N + C +KA +L M GV D ++ +++ A +NG +
Sbjct: 76 AIPPTRTTYNNVINACGAAGNWKKALELCKKMTENGVGPDLVTHNIVLSAL---KNGAQY 132
Query: 306 ELRKLQRHIDEAVNLSDIQFRQFYNCLLSCHLKFGDLNSASKMVLEMLQRAKEARNSLAA 365
I + N++ F N ++ C +K G A +E+ +E R
Sbjct: 133 SKAISYFEIMKGANVTSDTFT--LNIIIHCLVKIGQCGEA----IELFNSMRERRTKCPP 186
Query: 366 AMLPFNAVGVNNRTPSEQNVNCTNSVDLENSGIIENHILSYEDFTKDRKFVALEAEVKRV 425
++ + ++ +++ Q NC DL + ++ +I++Y L A R
Sbjct: 187 DVVTYTSI-MHSYCIYGQVENCKAIFDLMVAEGVKPNIVAYNSL--------LGAYASR- 236
Query: 426 LQTLLGMLQKQVELIT-TEHGILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQV 484
GM ++ + + + L+P Y L+ A+ + + ++ K +K + +
Sbjct: 237 -----GMHREALAIFNLIKKNGLRPDIVSYTSLLNAYGRSAQPEKAREVFNKMKKNSCK- 290
Query: 485 SHDDAALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTA 544
+ + +I S G L +A LL EM G++ ++LL A + +
Sbjct: 291 -PNKVSYNALIDAYGSAGMLKEAVGLLHEMEKDGIQPDVVSISTLLAACGRCRQITRIET 349
Query: 545 LLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGC 604
+L ARS GI L+ Y + ++S + D AL L+ M+ES + + + +L+ G
Sbjct: 350 ILEAARSRGIDLNTVAYNSGIKSYLSFGDYEKALELYTSMRESNV-KPDAVTYNILISGS 408
Query: 605 AQNHEAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPN 664
++ + + +++ +D V K+ + +AE M+ G P+
Sbjct: 409 SKLGKYTESLRFFEDM-----VDSKVSS--------TKEGKLSEAESTFSSMKKSGCFPD 455
Query: 665 AQTFHSMVTGYAAIGGKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARA 724
T+ +++ Y A GG + +L+ EM+ + D + S++ F +GG R
Sbjct: 456 VLTYTTLIQAYNA-GGGWKRAWDLFKEME----VNGIPPDAIICSSLMEAFNKGGEPERV 510
Query: 725 NEVVAMMEEGKMFIDKYKY 743
+++ M++ + +++ Y
Sbjct: 511 LQLMEFMKKKSIPLNQKSY 529
>gi|449530359|ref|XP_004172163.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g02860-like [Cucumis sativus]
Length = 831
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/301 (20%), Positives = 128/301 (42%), Gaps = 40/301 (13%)
Query: 484 VSHDDAALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVT 543
V+ D +I+ C ++A ++ +EM AG Y +LL Y ++ RPRE
Sbjct: 287 VAPDLYTYNTLISSCRRGSLYEEAAEVFEEMKAAGFSPDKVTYNALLDVYGKSRRPREAM 346
Query: 544 ALLRDARSAGIQLDASCYEAL---------------LQSKIVQKDTPGALHLFKEMKESK 588
+L++ ++G Y +L L+S++V+K + + + S
Sbjct: 347 EVLKEMEASGFAPSIVTYNSLISAYARDGLLDEAMELKSQMVKKGIKPDVFTYTTLL-SG 405
Query: 589 IPRSGHQEF------EMLVKGCAQN-----------HEAGLMAKLLQEVKEGQRIDC--G 629
++G ++ EM V GC N G ++++ +E + +C
Sbjct: 406 FEKTGKDDYAMKVFEEMRVAGCQPNICTFNALIKMHGNRGNFVEMMKVFEEIKICECVPD 465
Query: 630 VHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELW 689
+ WN ++ F + + + K M+ G +P TF+++++ Y+ G + + ++
Sbjct: 466 IVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERDTFNTLISAYSRCGF-FDQAMAIY 524
Query: 690 GEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFIDKYKYRTLFLK 749
M + D ++VL RGG + ++ +V+A M++G+ ++ Y +L
Sbjct: 525 RRML----DAGVTPDLSTYNAVLAALARGGLWEQSEKVLAEMKDGRCKPNELTYCSLLHA 580
Query: 750 Y 750
Y
Sbjct: 581 Y 581
Score = 47.4 bits (111), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 54/279 (19%), Positives = 101/279 (36%), Gaps = 32/279 (11%)
Query: 502 GWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCY 561
G + + EM AG + +L+ AY + A+ R AG+ D S Y
Sbjct: 480 GMDSEVSGVFKEMKRAGFVPERDTFNTLISAYSRCGFFDQAMAIYRRMLDAGVTPDLSTY 539
Query: 562 EALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVK 621
A+L + + + EMK+ + + + L+ A E M+ L +E+
Sbjct: 540 NAVLAALARGGLWEQSEKVLAEMKDGRC-KPNELTYCSLLHAYANGKEVERMSALAEEIY 598
Query: 622 EGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVT-------- 673
G I+ ++ + K L+ + E+A +R G P+ T ++MV+
Sbjct: 599 SGI-IEPQAVLLKTLVLVYSKSDLLTETERAFLELREQGFSPDITTLNAMVSIYGRRRMV 657
Query: 674 -------------GYAAIGGKYTEVTELWGEMKSFASS---------TSMNFDEELLDSV 711
G+ Y + ++ + F S M D ++V
Sbjct: 658 SKTNEILNFIKDSGFTPSLTTYNSLMYMYSRTEHFEKSEDILREIIAKGMKPDIISFNTV 717
Query: 712 LYTFVRGGFFARANEVVAMMEEGKMFIDKYKYRTLFLKY 750
++ + R G A+ + A M++ + D Y T Y
Sbjct: 718 IFAYCRNGRMKEASRIFAEMKDFGLAPDVITYNTFIASY 756
>gi|147784915|emb|CAN72973.1| hypothetical protein VITISV_019486 [Vitis vinifera]
Length = 550
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/219 (22%), Positives = 102/219 (46%), Gaps = 3/219 (1%)
Query: 483 QVSHDDAALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREV 542
V D + G +I C +G+LD+ ++L +M G+ + VY +L+ +
Sbjct: 146 NVKLDVYSFGIMIKGCCEVGYLDKGFEVLGQMEEMGLSPNVVVYTTLIDGCCKNGDIERG 205
Query: 543 TALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVK 602
L + + Y L+ + L+++MK + I + + M+ +
Sbjct: 206 KQLFYKMGELDVVANQYTYTVLINGFFKMGLKKDGIELYEKMKLTGIVPNVYTYNSMICR 265
Query: 603 GCAQNHEAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHL 662
C + + +L E++E + + C V +N +I C++R + +AE+ + RM+ G
Sbjct: 266 -CCNDGKLNNAFELFDEMRE-RGVACNVVTYNTLIGGLCQERRVLEAERLMCRMKRDGLS 323
Query: 663 PNAQTFHSMVTGYAAIGGKYTEVTELWGEMKSFASSTSM 701
PN ++++++ GY +I G + + L+ +MKS S S+
Sbjct: 324 PNLISYNTLIDGYCSI-GNLDKASSLFNQMKSSGQSPSL 361
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/173 (22%), Positives = 81/173 (46%), Gaps = 2/173 (1%)
Query: 500 SLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDAS 559
S+G LD+A L ++M +G S + Y L+ + EA VT ++R+ + G+
Sbjct: 338 SIGNLDKASSLFNQMKSSGQSPSLATYNILIAGFSEAKNSAGVTDMVREMEARGLSPSKV 397
Query: 560 CYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQE 619
Y L+ + + + A ++ M+++ + + + +L+ G + +KL +
Sbjct: 398 TYTILMDALVRSDNIEKAFQIYSSMEKAGLVADIYI-YGVLIHGLCVVGDMKEASKLFKS 456
Query: 620 VKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMV 672
+ E V +N +I+ +CK+ A + LK M G +PN +++S +
Sbjct: 457 LDEMHLKPNDV-IYNTMIYGYCKEGSSYRALRLLKEMGENGMVPNVASYNSTI 508
Score = 49.3 bits (116), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 67/161 (41%), Gaps = 2/161 (1%)
Query: 509 DLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSK 568
D++ EM G+ S Y L+ A + ++ + + AG+ D Y L+
Sbjct: 382 DMVREMEARGLSPSKVTYTILMDALVRSDNIEKAFQIYSSMEKAGLVADIYIYGVLIHGL 441
Query: 569 IVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRIDC 628
V D A LFK + E + + + ++ G + + +LL+E+ E +
Sbjct: 442 CVVGDMKEASKLFKSLDEMHL-KPNDVIYNTMIYGYCKEGSSYRALRLLKEMGENGMVP- 499
Query: 629 GVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFH 669
V +N+ I CK +AE LK M LG P+ ++
Sbjct: 500 NVASYNSTIXILCKDEKWTEAEVLLKDMIELGLKPSISIWN 540
>gi|297746072|emb|CBI16128.3| unnamed protein product [Vitis vinifera]
Length = 563
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/219 (22%), Positives = 102/219 (46%), Gaps = 3/219 (1%)
Query: 483 QVSHDDAALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREV 542
V D + G +I C +G+LD+ ++L +M G+ + VY +L+ +
Sbjct: 159 NVKLDVYSFGIMIKGCCEVGYLDKGFEVLGQMEEMGLSPNVVVYTTLIDGCCKNGDIERG 218
Query: 543 TALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVK 602
L + + Y L+ + L+++MK + I + + M+ +
Sbjct: 219 KQLFYKMGELDVVANQYTYTVLINGFFKMGLKKDGIELYEKMKLTGIVPNVYTYNSMICR 278
Query: 603 GCAQNHEAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHL 662
C + + +L E++E + + C V +N +I C++R + +AE+ + RM+ G
Sbjct: 279 -CCNDGKLNNAFELFDEMRE-RGVACNVVTYNTLIGGLCQERRVLEAERLMCRMKRDGLS 336
Query: 663 PNAQTFHSMVTGYAAIGGKYTEVTELWGEMKSFASSTSM 701
PN ++++++ GY +I G + + L+ +MKS S S+
Sbjct: 337 PNLISYNTLIDGYCSI-GNLDKASSLFNQMKSSGQSPSL 374
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/173 (22%), Positives = 81/173 (46%), Gaps = 2/173 (1%)
Query: 500 SLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDAS 559
S+G LD+A L ++M +G S + Y L+ + EA VT ++R+ + G+
Sbjct: 351 SIGNLDKASSLFNQMKSSGQSPSLATYNILIAGFSEAKNSAGVTDMVREMEARGLSPSKV 410
Query: 560 CYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQE 619
Y L+ + + + A ++ M+++ + + + +L+ G + +KL +
Sbjct: 411 TYTILMDALVRSDNIEKAFQIYSSMEKAGLVADIYI-YGVLIHGLCVVGDMKEASKLFKS 469
Query: 620 VKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMV 672
+ E V +N +I+ +CK+ A + LK M G +PN +++S +
Sbjct: 470 LDEMHLKPNDV-IYNTMIYGYCKEGSSYRALRLLKEMGENGMVPNVASYNSTI 521
Score = 49.7 bits (117), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 65/156 (41%), Gaps = 2/156 (1%)
Query: 509 DLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSK 568
D++ EM G+ S Y L+ A + ++ + + AG+ D Y L+
Sbjct: 395 DMVREMEARGLSPSKVTYTILMDALVRSDNIEKAFQIYSSMEKAGLVADIYIYGVLIHGL 454
Query: 569 IVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRIDC 628
V D A LFK + E + + + ++ G + + +LL+E+ E +
Sbjct: 455 CVVGDMKEASKLFKSLDEMHL-KPNDVIYNTMIYGYCKEGSSYRALRLLKEMGENGMVP- 512
Query: 629 GVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPN 664
V +N+ I CK +AE LK M LG P+
Sbjct: 513 NVASYNSTIQILCKDEKWTEAEVLLKDMIELGLKPS 548
>gi|115471647|ref|NP_001059422.1| Os07g0300200 [Oryza sativa Japonica Group]
gi|34394343|dbj|BAC84898.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
gi|50509027|dbj|BAD31989.1| putative fertility restorer [Oryza sativa Japonica Group]
gi|113610958|dbj|BAF21336.1| Os07g0300200 [Oryza sativa Japonica Group]
Length = 1013
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 76/329 (23%), Positives = 148/329 (44%), Gaps = 23/329 (6%)
Query: 454 YIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVIT-LCISLGWLDQAHDLLD 512
Y L+ +G +E F K + E+ + D G +I LC S ++A LLD
Sbjct: 282 YNVLIAGLCRSGAVEE--AFGFKKDMEDYGLVPDGFTYGALINGLCKSRRS-NEAKALLD 338
Query: 513 EMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQK 572
EM A ++ + VYA+L+ ++ E ++++ +AG+Q + Y+ L++
Sbjct: 339 EMSCAELKPNVVVYANLIDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMG 398
Query: 573 DTPGALHLFKEM-KESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRIDCGVH 631
A L K+M ++S P + + ++++G ++H +LL E+ E I V+
Sbjct: 399 QMDRASLLLKQMVRDSHRPDT--ITYNLIIEGHFRHHSKKDAFRLLSEM-ENAGISPNVY 455
Query: 632 DWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGE 691
++ +IH C+ + A L+ M + G PNA + +++GY G + E++ +
Sbjct: 456 TYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCR-EGNVSLACEIFDK 514
Query: 692 MKSFASSTSMNFDEEL--LDSVLYTFVRGGFFARANEVVAMMEEGKMFIDKYKYRTLFLK 749
M T +N +L +S+++ + G + + A M+E + +++ Y L
Sbjct: 515 M------TKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHG 568
Query: 750 YHKTLYKGKTPKFQTEAQLKKREAALGFK 778
Y K ++ QL +R G K
Sbjct: 569 YL------KNGDLESAEQLVQRMLDTGLK 591
Score = 66.6 bits (161), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 102/466 (21%), Positives = 188/466 (40%), Gaps = 32/466 (6%)
Query: 248 AMKPNTNTFNIALAGCLLFETTRKAEQLLDIMPRIGVKADSNLLIIMAHIYERNGRREEL 307
+ PN T++I + G KA LL+ M G+K ++ + + Y R G
Sbjct: 449 GISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLA 508
Query: 308 RKLQRHIDEAVNLSDIQFRQFYNCLLSCHLKFGDLNSASKMVLEMLQRAKEARNSLAAAM 367
++ + + L D+ YN L+ K G + ++K +M +R N +
Sbjct: 509 CEIFDKMTKVNVLPDLYC---YNSLIFGLSKVGRVEESTKYFAQMQERGL-LPNEFTYSG 564
Query: 368 LPFNAVGVNNRTPSEQNVNCTNSVDLENSGIIENHIL-SYEDFTKDRKFVALEAEVKRVL 426
L + + +EQ V L+ + +I +L SY F D ++++V
Sbjct: 565 LIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESY--FKSD--------DIEKVS 614
Query: 427 QTLLGMLQKQVELITTEHGILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSH 486
T ML + V L +IY L+ +G + L EK N V
Sbjct: 615 STFKSMLDQGVML----------DNRIYGILIHNLSSSGNMEAAFRVLSGIEK-NGSVPD 663
Query: 487 DDAALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALL 546
+ LC + ++A +LDEM GV + Y +L+ ++ +
Sbjct: 664 VHVYSSLISGLCKTADR-EKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVF 722
Query: 547 RDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQ 606
+ G+ + Y +L+ D A +L+ EM + I + +L GC+
Sbjct: 723 NSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFV-YSVLTTGCSS 781
Query: 607 NHEAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQ 666
+ L++E+ R + +NN++ FCK+ MQ+ K L + G +PNA
Sbjct: 782 AGDLEQAMFLIEEMF--LRGHASISSFNNLVDGFCKRGKMQETLKLLHVIMGRGLVPNAL 839
Query: 667 TFHSMVTGYAAIGGKYTEVTELWGEMKSFAS-STSMNFDEELLDSV 711
T ++++G + GK +EV ++ E++ S S + +F +D +
Sbjct: 840 TIENIISGLSE-AGKLSEVHTIFVELQQKTSESAARHFSSLFMDMI 884
Score = 42.4 bits (98), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 36/163 (22%), Positives = 69/163 (42%), Gaps = 2/163 (1%)
Query: 517 AGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQKDTPG 576
AG+ Y++L++AY + +L + R G L+ Y L+
Sbjct: 238 AGISPDVYTYSTLIEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEE 297
Query: 577 ALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRIDCGVHDWNNV 636
A K+M++ + G + L+ G ++ + LL E+ + + V + N+
Sbjct: 298 AFGFKKDMEDYGLVPDGFT-YGALINGLCKSRRSNEAKALLDEMSCAE-LKPNVVVYANL 355
Query: 637 IHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIG 679
I F ++ +A K +K M + G PN T+ ++V G +G
Sbjct: 356 IDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMG 398
>gi|50878351|gb|AAT85126.1| hypothetical protein [Oryza sativa Japonica Group]
Length = 920
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 74/310 (23%), Positives = 128/310 (41%), Gaps = 43/310 (13%)
Query: 447 LQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQ 506
L P Y LVK + + G+ +E ++K KE + D+ A G +I G +D
Sbjct: 284 LSPNVVTYTLLVKGYCKDGRMEEAER-VVKEMKETGDIVVDEVAYGMMINGYCQRGRMDD 342
Query: 507 AHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQ 566
A + +EM AG+ + VY +++ + R EV +L++ G++ D Y L+
Sbjct: 343 ATRVRNEMRDAGIHVNLFVYNTMINGLCKLGRMEEVQKVLQEMEDVGMRPDKYSYNTLID 402
Query: 567 SKIVQKDTPGALHLFKEMKES--------------------KIPRSGHQEFEMLVKGCAQ 606
+ A + + M + I + F ML +G A
Sbjct: 403 GYCREGSMRKAFEMCRMMVRNGLAATTLTYNTLLKGFCSLHAIDDALRLWFLMLKRGVAP 462
Query: 607 NH-----------EAGLMAKLLQEVKE--GQRIDCGVHDWNNVIHFFCKKRLMQDAEKAL 653
N +AG + L KE + + V +N VI+ CK M +AE+ L
Sbjct: 463 NEISCSTLLDGLFKAGKTEQALNLWKETLARGLAKNVITFNTVINGLCKIGRMAEAEELL 522
Query: 654 KRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEMKSFASSTSMNFDEELLDSVLY 713
RM+ L P++ T+ ++ GY + G+ T L +M+ + S+ E+ +S
Sbjct: 523 DRMKELRCPPDSLTYRTLFDGYCKL-GQLGTATHLMNKMEHLGFAPSV----EMFNS--- 574
Query: 714 TFVRGGFFAR 723
F+ G F A+
Sbjct: 575 -FITGHFIAK 583
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 79/369 (21%), Positives = 153/369 (41%), Gaps = 52/369 (14%)
Query: 445 GILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLC-ISLGW 503
G+L P E + KA+ G+ + F+ + E L+V + H + C +GW
Sbjct: 213 GVL-PDEFTVAIMAKAYCRDGRVAQAVEFVEEMEGMGLEV---NLVAYHAVMDCYCGMGW 268
Query: 504 LDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAG-IQLDASCYE 562
+ A +L+ + G+ + Y L+K Y + R E ++++ + G I +D Y
Sbjct: 269 TEDARRILESLQRKGLSPNVVTYTLLVKGYCKDGRMEEAERVVKEMKETGDIVVDEVAYG 328
Query: 563 ALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQE---FEMLVKGCAQNHEAGLMAKLLQE 619
++ + A + EM+++ I H + ++ G + + K+LQE
Sbjct: 329 MMINGYCQRGRMDDATRVRNEMRDAGI----HVNLFVYNTMINGLCKLGRMEEVQKVLQE 384
Query: 620 VKE-GQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAI 678
+++ G R D + +N +I +C++ M+ A + + M G T+++++ G+ ++
Sbjct: 385 MEDVGMRPD--KYSYNTLIDGYCREGSMRKAFEMCRMMVRNGLAATTLTYNTLLKGFCSL 442
Query: 679 ----------------GGKYTEV---TELWGEMKSFASSTSMNFDEELL----------- 708
G E+ T L G K+ + ++N +E L
Sbjct: 443 HAIDDALRLWFLMLKRGVAPNEISCSTLLDGLFKAGKTEQALNLWKETLARGLAKNVITF 502
Query: 709 DSVLYTFVRGGFFARANEVVAMMEEGKMFIDKYKYRTLFLKYHKTLYKGKTPKFQTEAQL 768
++V+ + G A A E++ M+E + D YRTLF Y K + T L
Sbjct: 503 NTVINGLCKIGRMAEAEELLDRMKELRCPPDSLTYRTLFDGY------CKLGQLGTATHL 556
Query: 769 KKREAALGF 777
+ LGF
Sbjct: 557 MNKMEHLGF 565
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/235 (20%), Positives = 100/235 (42%), Gaps = 6/235 (2%)
Query: 513 EMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQK 572
+M +AGV A + KAY R + + + G++++ Y A++
Sbjct: 208 QMRIAGVLPDEFTVAIMAKAYCRDGRVAQAVEFVEEMEGMGLEVNLVAYHAVMDCYCGMG 267
Query: 573 DTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRIDCGVHD 632
T A + + ++ + + +LVKG ++ ++++E+KE I
Sbjct: 268 WTEDARRILESLQRKGLS-PNVVTYTLLVKGYCKDGRMEEAERVVKEMKETGDIVVDEVA 326
Query: 633 WNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEM 692
+ +I+ +C++ M DA + MR G N +++M+ G + G+ EV ++ EM
Sbjct: 327 YGMMINGYCQRGRMDDATRVRNEMRDAGIHVNLFVYNTMINGLCKL-GRMEEVQKVLQEM 385
Query: 693 KSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFIDKYKYRTLF 747
+ M D+ ++++ + R G +A E+ MM + Y TL
Sbjct: 386 E----DVGMRPDKYSYNTLIDGYCREGSMRKAFEMCRMMVRNGLAATTLTYNTLL 436
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 104/505 (20%), Positives = 205/505 (40%), Gaps = 70/505 (13%)
Query: 302 GRREELRKLQRHIDEAVNLSDIQFRQFYNCLLSCHLKFGDLNSASKMVLEMLQRAKEARN 361
GR EE++K+ + +++ D + YN L+ + + G + A +M M+ RN
Sbjct: 373 GRMEEVQKVLQEMEDVGMRPD---KYSYNTLIDGYCREGSMRKAFEMCRMMV------RN 423
Query: 362 SLAAAMLPFNAV--------GVNN----------RTPSEQNVNCTNSVD-LENSGIIENH 402
LAA L +N + +++ R + ++C+ +D L +G E
Sbjct: 424 GLAATTLTYNTLLKGFCSLHAIDDALRLWFLMLKRGVAPNEISCSTLLDGLFKAGKTEQA 483
Query: 403 ILSYEDFTKDRKFVALEAEVKRVLQTL--LGMLQKQVELITTEHGILQPTEKI-YIKLVK 459
+ +++ T R V+ L +G + + EL+ + P + + Y L
Sbjct: 484 LNLWKE-TLARGLAKNVITFNTVINGLCKIGRMAEAEELLDRMKELRCPPDSLTYRTLFD 542
Query: 460 AFLEAGKTKELTHFLIKAEKENLQVS---HDDAALGHVITLCISLGWLDQAHDLLDEMHL 516
+ + G+ TH + K E S + GH I + W + +D+ EM
Sbjct: 543 GYCKLGQLGTATHLMNKMEHLGFAPSVEMFNSFITGHFI----AKQW-HKVNDIHSEMSA 597
Query: 517 AGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQKDTPG 576
G+ + Y +L+ + + E L + + G+ + AL+
Sbjct: 598 RGLSPNLVTYGALIAGWCKEGNLHEACNLYFEMVNNGMNPNVFICSALMSC--------- 648
Query: 577 ALHLFKEMK--ESKIPRSGHQEFEMLVKGCA-QNHEAGLMAKLLQEVKEGQRIDCGVHDW 633
+KE K E+ + +M + GC+ E ++ ++ + +G V W
Sbjct: 649 ---FYKEGKVDEANLVLQKLVNIDM-IPGCSISTIEIDKISHVVDTIADGNPHSANVM-W 703
Query: 634 NNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEMK 693
N +I CK + DA+ + +R+ LP+ T+ S++ G AA G + E + ++
Sbjct: 704 NVIIFGLCKSGRIADAKSLFESLRNKRFLPDNFTYSSLIHGCAASG----SIDEAF-SLR 758
Query: 694 SFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFIDKYKYRTLFLKYHKT 753
S + + +S++Y + G +RA + ++ + + Y TL +Y K
Sbjct: 759 DVMLSAGLTPNIITYNSLIYGLCKSGKLSRAVNLFNKLQSKGISPNGITYNTLIDEYCK- 817
Query: 754 LYKGKTPKFQTEA-QLKKREAALGF 777
+GKT TEA +LK++ G+
Sbjct: 818 --EGKT----TEAFKLKQKMVEEGY 836
>gi|168038876|ref|XP_001771925.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162676707|gb|EDQ63186.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 831
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 84/372 (22%), Positives = 166/372 (44%), Gaps = 37/372 (9%)
Query: 329 YNCLLSCHLKFGDLNSASKMVLEML-QRAKEARNSLAAAMLPFNAVGVNNRTPSEQNVNC 387
Y CL++ + K G ++ A ++ EM Q K R + + + + +G N
Sbjct: 373 YGCLINLYSKLGKMDKALQISNEMEDQGIKHNRKTYSMIIDGYVQLG--------DTANA 424
Query: 388 TNSV-DLENSGIIENHILSYEDFTKDRKFVALEAEVKRVLQTLLGMLQKQVELIT-TEHG 445
+ D+ N+GI + I +Y + + A K G + + +EL+ E G
Sbjct: 425 FSVFEDMSNAGIKPDGI-TYN--------ILMNAFCKN------GQMNRALELLARMESG 469
Query: 446 ILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCIS-LGWL 504
PT + Y ++ F++ G + + + + S AA +VI ++ G +
Sbjct: 470 DCPPTLRTYTIIIDGFMKIGDLRMAFETVRDMKMAGFRPS---AATYNVIMHGLAQAGQM 526
Query: 505 DQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEAL 564
D+A ++DEM +AGV + Y +L++ Y + G++ D Y +L
Sbjct: 527 DRAASIIDEMVVAGVHPNERSYTTLIEGYACIGDMGLAFKYFNRIKEVGLKPDVIAYASL 586
Query: 565 LQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVK-EG 623
L++ L + EM + +P + + + +L+ G AQ + + ++Q+++ EG
Sbjct: 587 LKACCKAGRMQSTLAITAEMAAAGVPMNNYI-YNILLDGWAQRGDMWEASDIMQKMRHEG 645
Query: 624 QRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYT 683
D +H + + I+ CK M A + +++M+ G PN Q + +++ G+A+ Y
Sbjct: 646 LTPD--IHSYTSFINACCKAGDMLKATETIEQMKQQGVQPNLQAYTTLIHGWAS--ASYP 701
Query: 684 EVTEL-WGEMKS 694
E + + EMKS
Sbjct: 702 EKALICYDEMKS 713
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/191 (21%), Positives = 87/191 (45%), Gaps = 4/191 (2%)
Query: 490 ALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDA 549
+ G +I L LG +D+A + +EM G++ + Y+ ++ Y++ ++ D
Sbjct: 372 SYGCLINLYSKLGKMDKALQISNEMEDQGIKHNRKTYSMIIDGYVQLGDTANAFSVFEDM 431
Query: 550 RSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHE 609
+AGI+ D Y L+ + AL L M+ P + + + +++ G + +
Sbjct: 432 SNAGIKPDGITYNILMNAFCKNGQMNRALELLARMESGDCPPT-LRTYTIIIDGFMKIGD 490
Query: 610 AGLMAKLLQEVK-EGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTF 668
+ + ++++K G R +N ++H + M A + M G PN +++
Sbjct: 491 LRMAFETVRDMKMAGFRPSAAT--YNVIMHGLAQAGQMDRAASIIDEMVVAGVHPNERSY 548
Query: 669 HSMVTGYAAIG 679
+++ GYA IG
Sbjct: 549 TTLIEGYACIG 559
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/108 (25%), Positives = 57/108 (52%), Gaps = 5/108 (4%)
Query: 626 IDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEV 685
I+ VH + N+IH + + ++ A ++ M + G PNA T+ +++GY +G E
Sbjct: 223 IEPNVHSYTNLIHAYAVAQDLRGAIACVEEMEAEGVSPNAATYSVIISGYGRLGD--VEA 280
Query: 686 TELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEE 733
E W + A S + + ++ + +++++ + + G RA ++ MEE
Sbjct: 281 AERWFQR---ALSENWHHNDVIYNNIIHAYCKAGNMERAEAIMTAMEE 325
Score = 45.8 bits (107), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 73/364 (20%), Positives = 146/364 (40%), Gaps = 28/364 (7%)
Query: 248 AMKPNTNTFNIALAGCLLFETTRKAEQLLDIMPRIGVKADSNLLIIMAHIYERNGRREEL 307
+K N T+++ + G + T A + + M G+K D I+ + + +NG+
Sbjct: 400 GIKHNRKTYSMIIDGYVQLGDTANAFSVFEDMSNAGIKPDGITYNILMNAFCKNGQMNRA 459
Query: 308 RKLQRHIDEAVNLSDIQFRQFYNCLLSCHLKFGDLNSASKMVLEM-LQRAKEARNSLAAA 366
+L ++ ++ Y ++ +K GDL A + V +M + + + +
Sbjct: 460 LELLARMESGDCPPTLRT---YTIIIDGFMKIGDLRMAFETVRDMKMAGFRPSAATYNVI 516
Query: 367 MLPFNAVGVNNRTPS---EQNVNCTNSVDLENSGIIENHI------LSYEDFTKDRKFVA 417
M G +R S E V + + + +IE + L+++ F + ++ V
Sbjct: 517 MHGLAQAGQMDRAASIIDEMVVAGVHPNERSYTTLIEGYACIGDMGLAFKYFNRIKE-VG 575
Query: 418 LEAEVKRVLQTL-----LGMLQKQVELITTEHGILQPTEK-IYIKLVKAFLEAGKTKELT 471
L+ +V L G +Q + + P IY L+ + + G E +
Sbjct: 576 LKPDVIAYASLLKACCKAGRMQSTLAITAEMAAAGVPMNNYIYNILLDGWAQRGDMWEAS 635
Query: 472 HFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLK 531
+ K E L + D + I C G + +A + +++M GV+ + Y +L+
Sbjct: 636 DIMQKMRHEGL--TPDIHSYTSFINACCKAGDMLKATETIEQMKQQGVQPNLQAYTTLIH 693
Query: 532 AYIEANRPREVTALLRDARSAGIQLDASCYE----ALLQSKIVQKDT--PGALHLFKEMK 585
+ A+ P + + +SAG+ D Y +LL V ++T G L + EM
Sbjct: 694 GWASASYPEKALICYDEMKSAGMIPDKPLYHCIMTSLLSRAAVARETVFDGVLRVTSEMV 753
Query: 586 ESKI 589
+ I
Sbjct: 754 DQGI 757
>gi|218196467|gb|EEC78894.1| hypothetical protein OsI_19266 [Oryza sativa Indica Group]
gi|222630938|gb|EEE63070.1| hypothetical protein OsJ_17878 [Oryza sativa Japonica Group]
Length = 939
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 74/310 (23%), Positives = 128/310 (41%), Gaps = 43/310 (13%)
Query: 447 LQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQ 506
L P Y LVK + + G+ +E ++K KE + D+ A G +I G +D
Sbjct: 284 LSPNVVTYTLLVKGYCKDGRMEEAER-VVKEMKETGDIVVDEVAYGMMINGYCQRGRMDD 342
Query: 507 AHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQ 566
A + +EM AG+ + VY +++ + R EV +L++ G++ D Y L+
Sbjct: 343 ATRVRNEMRDAGIHVNLFVYNTMINGLCKLGRMEEVQKVLQEMEDVGMRPDKYSYNTLID 402
Query: 567 SKIVQKDTPGALHLFKEMKES--------------------KIPRSGHQEFEMLVKGCAQ 606
+ A + + M + I + F ML +G A
Sbjct: 403 GYCREGSMRKAFEMCRMMVRNGLAATTLTYNTLLKGFCSLHAIDDALRLWFLMLKRGVAP 462
Query: 607 NH-----------EAGLMAKLLQEVKE--GQRIDCGVHDWNNVIHFFCKKRLMQDAEKAL 653
N +AG + L KE + + V +N VI+ CK M +AE+ L
Sbjct: 463 NEISCSTLLDGLFKAGKTEQALNLWKETLARGLAKNVITFNTVINGLCKIGRMAEAEELL 522
Query: 654 KRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEMKSFASSTSMNFDEELLDSVLY 713
RM+ L P++ T+ ++ GY + G+ T L +M+ + S+ E+ +S
Sbjct: 523 DRMKELRCPPDSLTYRTLFDGYCKL-GQLGTATHLMNKMEHLGFAPSV----EMFNS--- 574
Query: 714 TFVRGGFFAR 723
F+ G F A+
Sbjct: 575 -FITGHFIAK 583
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 79/369 (21%), Positives = 153/369 (41%), Gaps = 52/369 (14%)
Query: 445 GILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLC-ISLGW 503
G+L P E + KA+ G+ + F+ + E L+V + H + C +GW
Sbjct: 213 GVL-PDEFTVAIMAKAYCRDGRVAQAVEFVEEMEGMGLEV---NLVAYHAVMDCYCGMGW 268
Query: 504 LDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAG-IQLDASCYE 562
+ A +L+ + G+ + Y L+K Y + R E ++++ + G I +D Y
Sbjct: 269 TEDARRILESLQRKGLSPNVVTYTLLVKGYCKDGRMEEAERVVKEMKETGDIVVDEVAYG 328
Query: 563 ALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQE---FEMLVKGCAQNHEAGLMAKLLQE 619
++ + A + EM+++ I H + ++ G + + K+LQE
Sbjct: 329 MMINGYCQRGRMDDATRVRNEMRDAGI----HVNLFVYNTMINGLCKLGRMEEVQKVLQE 384
Query: 620 VKE-GQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAI 678
+++ G R D + +N +I +C++ M+ A + + M G T+++++ G+ ++
Sbjct: 385 MEDVGMRPD--KYSYNTLIDGYCREGSMRKAFEMCRMMVRNGLAATTLTYNTLLKGFCSL 442
Query: 679 ----------------GGKYTEV---TELWGEMKSFASSTSMNFDEELL----------- 708
G E+ T L G K+ + ++N +E L
Sbjct: 443 HAIDDALRLWFLMLKRGVAPNEISCSTLLDGLFKAGKTEQALNLWKETLARGLAKNVITF 502
Query: 709 DSVLYTFVRGGFFARANEVVAMMEEGKMFIDKYKYRTLFLKYHKTLYKGKTPKFQTEAQL 768
++V+ + G A A E++ M+E + D YRTLF Y K + T L
Sbjct: 503 NTVINGLCKIGRMAEAEELLDRMKELRCPPDSLTYRTLFDGY------CKLGQLGTATHL 556
Query: 769 KKREAALGF 777
+ LGF
Sbjct: 557 MNKMEHLGF 565
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/235 (20%), Positives = 100/235 (42%), Gaps = 6/235 (2%)
Query: 513 EMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQK 572
+M +AGV A + KAY R + + + G++++ Y A++
Sbjct: 208 QMRIAGVLPDEFTVAIMAKAYCRDGRVAQAVEFVEEMEGMGLEVNLVAYHAVMDCYCGMG 267
Query: 573 DTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRIDCGVHD 632
T A + + ++ + + +LVKG ++ ++++E+KE I
Sbjct: 268 WTEDARRILESLQRKGLS-PNVVTYTLLVKGYCKDGRMEEAERVVKEMKETGDIVVDEVA 326
Query: 633 WNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEM 692
+ +I+ +C++ M DA + MR G N +++M+ G + G+ EV ++ EM
Sbjct: 327 YGMMINGYCQRGRMDDATRVRNEMRDAGIHVNLFVYNTMINGLCKL-GRMEEVQKVLQEM 385
Query: 693 KSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFIDKYKYRTLF 747
+ M D+ ++++ + R G +A E+ MM + Y TL
Sbjct: 386 E----DVGMRPDKYSYNTLIDGYCREGSMRKAFEMCRMMVRNGLAATTLTYNTLL 436
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 104/506 (20%), Positives = 205/506 (40%), Gaps = 70/506 (13%)
Query: 302 GRREELRKLQRHIDEAVNLSDIQFRQFYNCLLSCHLKFGDLNSASKMVLEMLQRAKEARN 361
GR EE++K+ + +++ D + YN L+ + + G + A +M M+ RN
Sbjct: 373 GRMEEVQKVLQEMEDVGMRPD---KYSYNTLIDGYCREGSMRKAFEMCRMMV------RN 423
Query: 362 SLAAAMLPFNAV--------GVNN----------RTPSEQNVNCTNSVD-LENSGIIENH 402
LAA L +N + +++ R + ++C+ +D L +G E
Sbjct: 424 GLAATTLTYNTLLKGFCSLHAIDDALRLWFLMLKRGVAPNEISCSTLLDGLFKAGKTEQA 483
Query: 403 ILSYEDFTKDRKFVALEAEVKRVLQTL--LGMLQKQVELITTEHGILQPTEKI-YIKLVK 459
+ +++ T R V+ L +G + + EL+ + P + + Y L
Sbjct: 484 LNLWKE-TLARGLAKNVITFNTVINGLCKIGRMAEAEELLDRMKELRCPPDSLTYRTLFD 542
Query: 460 AFLEAGKTKELTHFLIKAEKENLQVS---HDDAALGHVITLCISLGWLDQAHDLLDEMHL 516
+ + G+ TH + K E S + GH I + W + +D+ EM
Sbjct: 543 GYCKLGQLGTATHLMNKMEHLGFAPSVEMFNSFITGHFI----AKQW-HKVNDIHSEMSA 597
Query: 517 AGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQKDTPG 576
G+ + Y +L+ + + E L + + G+ + AL+
Sbjct: 598 RGLSPNLVTYGALIAGWCKEGNLHEACNLYFEMVNNGMNPNVFICSALMSC--------- 648
Query: 577 ALHLFKEMK--ESKIPRSGHQEFEMLVKGCA-QNHEAGLMAKLLQEVKEGQRIDCGVHDW 633
+KE K E+ + +M + GC+ E ++ ++ + +G V W
Sbjct: 649 ---FYKEGKVDEANLVLQKLVNIDM-IPGCSISTIEIDKISHVVDTIADGNPHSANVM-W 703
Query: 634 NNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEMK 693
N +I CK + DA+ + +R+ LP+ T+ S++ G AA G + E + ++
Sbjct: 704 NVIIFGLCKSGRIADAKSLFESLRNKRFLPDNFTYSSLIHGCAASG----SIDEAF-SLR 758
Query: 694 SFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFIDKYKYRTLFLKYHKT 753
S + + +S++Y + G +RA + ++ + + Y TL +Y K
Sbjct: 759 DVMLSAGLTPNIITYNSLIYGLCKSGKLSRAVNLFNKLQSKGISPNGITYNTLIDEYCK- 817
Query: 754 LYKGKTPKFQTEA-QLKKREAALGFK 778
+GKT TEA +LK++ G +
Sbjct: 818 --EGKT----TEAFKLKQKMVEEGIQ 837
Score = 44.3 bits (103), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 75/178 (42%), Gaps = 4/178 (2%)
Query: 487 DDAALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALL 546
D+ +I C + G +D+A L D M AG+ + Y SL+ ++ + L
Sbjct: 734 DNFTYSSLIHGCAASGSIDEAFSLRDVMLSAGLTPNIITYNSLIYGLCKSGKLSRAVNLF 793
Query: 547 RDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKG-CA 605
+S GI + Y L+ + T A L ++M E I + + +L+ G C
Sbjct: 794 NKLQSKGISPNGITYNTLIDEYCKEGKTTEAFKLKQKMVEEGI-QPTVITYSILIYGLCT 852
Query: 606 QNHEAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLP 663
Q + + KLL ++ E +D + +IH + K M++ K M G LP
Sbjct: 853 QGYMEEAI-KLLDQMIE-NNVDPNYITYCTLIHGYIKSGNMEEISKLYDEMHIRGLLP 908
>gi|218191892|gb|EEC74319.1| hypothetical protein OsI_09597 [Oryza sativa Indica Group]
Length = 1167
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 76/329 (23%), Positives = 148/329 (44%), Gaps = 23/329 (6%)
Query: 454 YIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVIT-LCISLGWLDQAHDLLD 512
Y L+ +G +E F K + E+ + D G +I LC S ++A LLD
Sbjct: 155 YNVLIAGLCRSGAVEE--AFGFKKDMEDYGLVPDGFTYGALINGLCKSRRS-NEAKALLD 211
Query: 513 EMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQK 572
EM A ++ + VYA+L+ ++ E ++++ +AG+Q + Y+ L++
Sbjct: 212 EMSCAELKPNVVVYANLIDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMG 271
Query: 573 DTPGALHLFKEM-KESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRIDCGVH 631
A L K+M ++S P + + ++++G ++H +LL E+ E I V+
Sbjct: 272 QMDRASLLLKQMVRDSHRPDT--ITYNLIIEGHFRHHNKKDAFRLLSEM-ENAGISPNVY 328
Query: 632 DWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGE 691
++ +IH C+ + A L+ M + G PNA + +++GY G + E++ +
Sbjct: 329 TYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCR-EGNVSLACEIFDK 387
Query: 692 MKSFASSTSMNFDEEL--LDSVLYTFVRGGFFARANEVVAMMEEGKMFIDKYKYRTLFLK 749
M T +N +L +S+++ + G + + A M+E + +++ Y L
Sbjct: 388 M------TKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHG 441
Query: 750 YHKTLYKGKTPKFQTEAQLKKREAALGFK 778
Y K ++ QL +R G K
Sbjct: 442 YL------KNGDLESAEQLVQRMLDTGLK 464
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 102/466 (21%), Positives = 189/466 (40%), Gaps = 32/466 (6%)
Query: 248 AMKPNTNTFNIALAGCLLFETTRKAEQLLDIMPRIGVKADSNLLIIMAHIYERNGRREEL 307
+ PN T++I + G KA LL+ M G+K ++ + + Y R G
Sbjct: 322 GISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLA 381
Query: 308 RKLQRHIDEAVNLSDIQFRQFYNCLLSCHLKFGDLNSASKMVLEMLQRAKEARNSLAAAM 367
++ + + L D+ YN L+ K G + ++K +M +R N +
Sbjct: 382 CEIFDKMTKVNVLPDLYC---YNSLIFGLSKVGRVEESTKYFAQMQERGL-LPNEFTYSG 437
Query: 368 LPFNAVGVNNRTPSEQNVNCTNSVDLENSGIIENHIL-SYEDFTKDRKFVALEAEVKRVL 426
L + + +EQ V L+ + +I +L SY F D ++++V
Sbjct: 438 LIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESY--FKSD--------DIEKVS 487
Query: 427 QTLLGMLQKQVELITTEHGILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSH 486
T ML + V L +IY L+ +G + L + EK N V
Sbjct: 488 STFKSMLDQGVML----------DNRIYGILIHNLSSSGNMEAAFRVLSEIEK-NGSVPD 536
Query: 487 DDAALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALL 546
+ LC + ++A +LDEM GV + Y +L+ ++ +
Sbjct: 537 VHVYSSLISGLCKTADR-EKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVF 595
Query: 547 RDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQ 606
+ G+ + Y +L+ D A +L+ EM + I + +L GC+
Sbjct: 596 NSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFV-YSVLTTGCSS 654
Query: 607 NHEAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQ 666
+ L++E+ R + +NN++ FCK+ MQ+ K L + G +PNA
Sbjct: 655 AGDLEQAMFLIEEMF--LRGHASISSFNNLVDGFCKRGKMQETLKLLHVIMGRGLVPNAL 712
Query: 667 TFHSMVTGYAAIGGKYTEVTELWGEMKSFAS-STSMNFDEELLDSV 711
T ++++G + GK +EV ++ E++ S S + +F +D +
Sbjct: 713 TIENIISGLSE-AGKLSEVHTIFVELQQKTSESAARHFSSLFMDMI 757
Score = 43.5 bits (101), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 48/236 (20%), Positives = 94/236 (39%), Gaps = 17/236 (7%)
Query: 517 AGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQKDTPG 576
AG+ Y++L++AY + +L + R G L+ Y L+
Sbjct: 111 AGISPDVYTYSTLIEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEE 170
Query: 577 ALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRIDCGVHDWNNV 636
A K+M++ + G + L+ G ++ + LL E+ + + V + N+
Sbjct: 171 AFGFKKDMEDYGLVPDGFT-YGALINGLCKSRRSNEAKALLDEMSCAE-LKPNVVVYANL 228
Query: 637 IHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEMKSFA 696
I F ++ +A K +K M + G PN T+ ++V G + G+ + L +M
Sbjct: 229 IDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKM-GQMDRASLLLKQMVR-- 285
Query: 697 SSTSMNFDEELLDSVLYTFVRGGFFARANE-----VVAMMEEGKMFIDKYKYRTLF 747
D D++ Y + G F N+ +++ ME + + Y Y +
Sbjct: 286 -------DSHRPDTITYNLIIEGHFRHHNKKDAFRLLSEMENAGISPNVYTYSIMI 334
>gi|242096872|ref|XP_002438926.1| hypothetical protein SORBIDRAFT_10g028420 [Sorghum bicolor]
gi|241917149|gb|EER90293.1| hypothetical protein SORBIDRAFT_10g028420 [Sorghum bicolor]
Length = 924
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 103/478 (21%), Positives = 189/478 (39%), Gaps = 42/478 (8%)
Query: 248 AMKPNTNTFNIALAGCLLFETTRKAEQLLDIMPRIGVKADSNLLIIMAHIYERNGR---- 303
+ PN T++I + G + +A LL+ M G+K ++ + + Y R G
Sbjct: 448 GISPNVYTYSIIINGLCQIGESERASGLLEQMIADGLKPNAFVYAPLISGYCREGSFSLA 507
Query: 304 REELRKLQRHIDEAVNLSDIQFRQFYNCLLSCHLKFGDLNSASKMVLEMLQRAKEARNSL 363
E L+K+ R NL+ + YN L+ G ++ A + EML++ + N
Sbjct: 508 CETLKKMTRE-----NLTPDLY--CYNSLIIGLSNVGKMDEAIEYYDEMLEKGFQP-NDF 559
Query: 364 AAAMLPFNAVGVNNRTPSEQNVNCTNSVDLENSGIIENHILSYEDFTKDRKFVALEAEVK 423
L N +EQ ++ + NSG+ N + + K LE
Sbjct: 560 TYGGLIHGYSMAGNLEKAEQLLH-----QMLNSGLNPNDFIYAQILEGYFKSDNLE---- 610
Query: 424 RVLQTLLGMLQKQVELITTEHGILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQ 483
+V TL ML+K L P ++Y ++ +G + L EK L
Sbjct: 611 KVSSTLKSMLEKG----------LMPDNRLYGIVIHNLSSSGHMQAAVSVLSVIEKNGL- 659
Query: 484 VSHDDAALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVT 543
D G +I+ +++A LLDEM G+ S Y +L+ + +++
Sbjct: 660 -VPDSLIYGSLISGFCKAADMEKAVGLLDEMAKKGIEPGISCYNALIDGFCKSDDISHAR 718
Query: 544 ALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKG 603
+ G+ + Y L+ D A+ L+ EM + + +L G
Sbjct: 719 NIFNSIICKGLPPNCVTYTTLIDGYCKAGDIRDAIDLYNEMLTEGVAPDAFV-YSVLAAG 777
Query: 604 CAQNHEAGLMAKLLQE-VKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHL 662
C+ + + + +E + G I + +N ++H FCK+ +Q+ K L M +
Sbjct: 778 CSNSGDLQQALFITEEMIARGYAI---ISSFNTLVHGFCKRGKLQETVKFLHVMMDKDIV 834
Query: 663 PNAQTFHSMVTGYAAIGGKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGF 720
P+ T ++V G GK +E ++ E++ +S + D + L S+ + G
Sbjct: 835 PSLLTVENIVIGLGE-AGKLSEAHTIFVELQQKNAS---HRDTDHLSSLFTDMINQGL 888
Score = 68.9 bits (167), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 106/227 (46%), Gaps = 6/227 (2%)
Query: 454 YIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQAHDLLDE 513
Y L+ AG +E F K E E+ + D G +I G DQA LLDE
Sbjct: 281 YNTLIGGLCRAGAIEE--AFGYKKEMEDYGLVPDGFTYGAIINGLCKRGRPDQAKCLLDE 338
Query: 514 MHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQKD 573
M AG+ + VY++L+ ++ E ++++ +AG+Q + Y+ L++
Sbjct: 339 MSCAGLMPNVVVYSTLIDGFMRQGNADEAFKIVKEMSAAGVQPNKITYDNLIRGLCKLGR 398
Query: 574 TPGALHLFKEMKESKIP-RSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRIDCGVHD 632
A + K+M +KI + + ++++G + H LL E+++G I V+
Sbjct: 399 MGRASRILKQM--TKIGYMADTMTYNLVIEGHLRQHNKEEAFLLLNEMRKGG-ISPNVYT 455
Query: 633 WNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIG 679
++ +I+ C+ + A L++M + G PNA + +++GY G
Sbjct: 456 YSIIINGLCQIGESERASGLLEQMIADGLKPNAFVYAPLISGYCREG 502
Score = 39.3 bits (90), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 37/192 (19%), Positives = 78/192 (40%), Gaps = 4/192 (2%)
Query: 514 MHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQKD 573
M AG+ Y++L++AY + ++ + R G L+ Y L+
Sbjct: 234 MEGAGISPDVYTYSTLIEAYCKVRDLESAKKVVEEMRETGCSLNVVTYNTLIGGLCRAGA 293
Query: 574 TPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRIDCGVHDW 633
A KEM++ + G + ++ G + LL E+ + V +
Sbjct: 294 IEEAFGYKKEMEDYGLVPDGFT-YGAIINGLCKRGRPDQAKCLLDEMSCAGLMP-NVVVY 351
Query: 634 NNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIG--GKYTEVTELWGE 691
+ +I F ++ +A K +K M + G PN T+ +++ G +G G+ + + + +
Sbjct: 352 STLIDGFMRQGNADEAFKIVKEMSAAGVQPNKITYDNLIRGLCKLGRMGRASRILKQMTK 411
Query: 692 MKSFASSTSMNF 703
+ A + + N
Sbjct: 412 IGYMADTMTYNL 423
>gi|358346916|ref|XP_003637510.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355503445|gb|AES84648.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 718
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 71/311 (22%), Positives = 134/311 (43%), Gaps = 22/311 (7%)
Query: 442 TEHGILQPTEKIYIKLVKAFLEAGKTKE---LTHFLIKAEKENLQVSHDDAALGHVITLC 498
+E G P + + LV F G + + F+I+ D +I+
Sbjct: 255 SEEG-FSPDQVTFNSLVNGFCRIGNVNDALDIVDFMIEK-----GFDPDVYTYNSLISGM 308
Query: 499 ISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDA 558
LG ++A ++L +M L ++ Y +L+ A + N T L R S G+ D
Sbjct: 309 CKLGEFEKAIEILQQMILRECSPNTVTYNTLISALCKENEIEAATDLARILVSKGLLPDV 368
Query: 559 SCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKG-CAQNHEAGLMAKLL 617
+ L+Q + K+ A+ +F+EMK +K + + +L+ C + + + L
Sbjct: 369 CTFNTLIQGLCLSKNQDIAMEMFEEMK-NKGCKPDEFTYSILIDSLCYERR----LKEAL 423
Query: 618 QEVKEGQRIDCGVHD--WNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGY 675
+KE + C + +N +I CK R ++DAE+ +M LG ++ T+++++ G
Sbjct: 424 MLLKEMESSGCARNAVVYNTLIDGLCKSRRIEDAEEIFDQMELLGVSRSSVTYNTLIDGL 483
Query: 676 AAIGGKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGK 735
+ E ++L +M + D+ +S+L F R G +A ++V M
Sbjct: 484 CK-NKRVEEASQLMDQM----IMEGLKPDKFTYNSLLTYFCRVGDIEKAGDIVQTMASNG 538
Query: 736 MFIDKYKYRTL 746
D + Y TL
Sbjct: 539 CEPDIFTYGTL 549
Score = 49.3 bits (116), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 41/176 (23%), Positives = 86/176 (48%), Gaps = 5/176 (2%)
Query: 518 GVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQKDTPGA 577
G+ S + L+KA +A++ R +L + + G++ D + L+Q I + D GA
Sbjct: 153 GIVLDVSTFNVLIKALCKAHQLRPAILMLEEMANHGLKPDEITFTTLMQGFIEEGDLNGA 212
Query: 578 LHLFKEMKESKIPRSGHQEFEMLVKG-CAQNHEAGLMAKLLQEVKEGQRIDCGVHDWNNV 636
L + K+M + + ++LV G C + + +L+ +EG D +N++
Sbjct: 213 LKMKKQMLGYGCLLT-NVSVKVLVNGFCKEGRVEEALRFVLEVSEEGFSPD--QVTFNSL 269
Query: 637 IHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEM 692
++ FC+ + DA + M G P+ T++S+++G + G++ + E+ +M
Sbjct: 270 VNGFCRIGNVNDALDIVDFMIEKGFDPDVYTYNSLISGMCKL-GEFEKAIEILQQM 324
Score = 48.1 bits (113), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 32/137 (23%), Positives = 59/137 (43%), Gaps = 2/137 (1%)
Query: 454 YIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQAHDLLDE 513
Y L+ + + +E + + + E L+ D ++T +G +++A D++
Sbjct: 476 YNTLIDGLCKNKRVEEASQLMDQMIMEGLK--PDKFTYNSLLTYFCRVGDIEKAGDIVQT 533
Query: 514 MHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQKD 573
M G Y +L+ A R + LLR + GI L Y ++Q+ ++K
Sbjct: 534 MASNGCEPDIFTYGTLIGGLCRAGRVDVASKLLRSVQMKGIVLTPHAYNPVIQALFMRKR 593
Query: 574 TPGALHLFKEMKESKIP 590
T + LF+EM E P
Sbjct: 594 TKEGMRLFREMMEKSDP 610
Score = 47.4 bits (111), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 54/246 (21%), Positives = 98/246 (39%), Gaps = 6/246 (2%)
Query: 448 QPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVIT-LCISLGWLDQ 506
+P E Y L+ + + KE ++ E E+ + + +I LC S ++
Sbjct: 400 KPDEFTYSILIDSLCYERRLKE--ALMLLKEMESSGCARNAVVYNTLIDGLCKS-RRIED 456
Query: 507 AHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQ 566
A ++ D+M L GV SS Y +L+ + R E + L+ G++ D Y +LL
Sbjct: 457 AEEIFDQMELLGVSRSSVTYNTLIDGLCKNKRVEEASQLMDQMIMEGLKPDKFTYNSLLT 516
Query: 567 SKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRI 626
D A + + M + + L+ G + + +KLL+ V+ + I
Sbjct: 517 YFCRVGDIEKAGDIVQTMASNGCEPDIFT-YGTLIGGLCRAGRVDVASKLLRSVQM-KGI 574
Query: 627 DCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVT 686
H +N VI ++ ++ + + M P+A T + G GG E
Sbjct: 575 VLTPHAYNPVIQALFMRKRTKEGMRLFREMMEKSDPPDALTHKIVFRGLCNGGGPIQEAI 634
Query: 687 ELWGEM 692
+ EM
Sbjct: 635 DFTVEM 640
>gi|356513139|ref|XP_003525271.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g21222-like [Glycine max]
Length = 621
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 107/240 (44%), Gaps = 16/240 (6%)
Query: 442 TEHGILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISL 501
TE G +PT Y LV A + K + L K ++ D L +I
Sbjct: 87 TEEG-HKPTLITYTTLVAALTRQKRFKSIPALLSKVADNGMK--PDSILLNAMINAFSDS 143
Query: 502 GWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRD-ARSAGIQLDASC 560
G +D+A + +M G + ++S Y +L+K + RP E LL + ++ +
Sbjct: 144 GKVDEAMKIFQKMKEYGCKPTTSTYNTLIKGFGIVGRPYESMKLLEMMGQDENVKPNDRT 203
Query: 561 YEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLL--- 617
Y L+Q+ +K A ++ +M S I + + + + AQN E +L+
Sbjct: 204 YNILIQAWCTKKKLEEAWNVLHKMVASGI-QPDVVTYNTMARAYAQNGETEKAERLILKM 262
Query: 618 --QEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGY 675
+VK +R CG+ +I +CK+ M +A + L RM+ LG PN F+S++ GY
Sbjct: 263 QYNKVKPNERT-CGI-----IISGYCKEGNMTEALRFLYRMKELGVHPNPVVFNSLIKGY 316
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 60/310 (19%), Positives = 129/310 (41%), Gaps = 9/310 (2%)
Query: 447 LQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQ 506
+QP Y + +A+ + G+T++ ++K + +V ++ G +I+ G + +
Sbjct: 232 IQPDVVTYNTMARAYAQNGETEKAERLILKMQYN--KVKPNERTCGIIISGYCKEGNMTE 289
Query: 507 AHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQ 566
A L M GV + V+ SL+K Y++A V L GI+ D + ++
Sbjct: 290 ALRFLYRMKELGVHPNPVVFNSLIKGYLDATDTNGVDEALTLMEEFGIKPDVVTFSTIMN 349
Query: 567 SKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRI 626
+ +F +M ++ I H + +L KG + + LL + + +
Sbjct: 350 AWSSAGLMDNCEEIFNDMVKAGIEPDIHA-YSILAKGYVRAGQPRKAESLLTSMSK-YGV 407
Query: 627 DCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVT 686
V + +I +C M A ++M +G PN +T+ +++ GY + +
Sbjct: 408 QTNVVIFTTIISGWCAAGKMDRAFSLCEKMHEMGTSPNLKTYETLIWGYGEAKQPW-KAE 466
Query: 687 ELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFIDKYKYRTL 746
E+ M+ M+ + + D+ + G F AN ++ EE ++ +
Sbjct: 467 EILSTMEERGVVPEMSTMQLVADA----WRAIGLFKEANRILNGSEEESELDQEFDSDKM 522
Query: 747 FLKYHKTLYK 756
++ +++YK
Sbjct: 523 PVQSLESIYK 532
Score = 52.8 bits (125), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 45/209 (21%), Positives = 89/209 (42%), Gaps = 4/209 (1%)
Query: 471 THFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLL 530
+H LI + Q H L + + I G +A + + G + + Y +L+
Sbjct: 46 SHCLICRGNNSCQTVHARTKLMNAL---IGKGKPHEAQAVFHNLTEEGHKPTLITYTTLV 102
Query: 531 KAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIP 590
A R + + ALL G++ D+ A++ + A+ +F++MKE
Sbjct: 103 AALTRQKRFKSIPALLSKVADNGMKPDSILLNAMINAFSDSGKVDEAMKIFQKMKEYGC- 161
Query: 591 RSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAE 650
+ + L+KG KLL+ + + + + +N +I +C K+ +++A
Sbjct: 162 KPTTSTYNTLIKGFGIVGRPYESMKLLEMMGQDENVKPNDRTYNILIQAWCTKKKLEEAW 221
Query: 651 KALKRMRSLGHLPNAQTFHSMVTGYAAIG 679
L +M + G P+ T+++M YA G
Sbjct: 222 NVLHKMVASGIQPDVVTYNTMARAYAQNG 250
Score = 48.9 bits (115), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 64/339 (18%), Positives = 125/339 (36%), Gaps = 63/339 (18%)
Query: 250 KPNTNTFNIALAGCLLFETTRKAEQLLDIMPRI-GVKADSNLLIIMAHIYERNGRREEL- 307
KP T+T+N + G + ++ +LL++M + VK + I+ + + EE
Sbjct: 162 KPTTSTYNTLIKGFGIVGRPYESMKLLEMMGQDENVKPNDRTYNILIQAWCTKKKLEEAW 221
Query: 308 RKLQRHIDEAVNLSDIQFRQFYNCLLSCHLKFGDLNSASKMVLEMLQRAKEARNSLAAAM 367
L + + + + YN + + + G+ A +++L+M
Sbjct: 222 NVLHKMVASGIQPDVVT----YNTMARAYAQNGETEKAERLILKM--------------- 262
Query: 368 LPFNAVGVNNRTPSEQNVNCTNSVDLENSGIIENHILSYEDFTKDRKFVALEAEVKRVLQ 427
+N V N RT GII + + T+ +F+ E
Sbjct: 263 -QYNKVKPNERT----------------CGIIISGYCKEGNMTEALRFLYRMKE------ 299
Query: 428 TLLGMLQKQVELITTEHGILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHD 487
LG + P ++ L+K +L+A T + L E+ + D
Sbjct: 300 --LG---------------VHPNPVVFNSLIKGYLDATDTNGVDEALTLMEE--FGIKPD 340
Query: 488 DAALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLR 547
++ S G +D ++ ++M AG+ Y+ L K Y+ A +PR+ +LL
Sbjct: 341 VVTFSTIMNAWSSAGLMDNCEEIFNDMVKAGIEPDIHAYSILAKGYVRAGQPRKAESLLT 400
Query: 548 DARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKE 586
G+Q + + ++ A L ++M E
Sbjct: 401 SMSKYGVQTNVVIFTTIISGWCAAGKMDRAFSLCEKMHE 439
>gi|224137250|ref|XP_002327079.1| predicted protein [Populus trichocarpa]
gi|222835394|gb|EEE73829.1| predicted protein [Populus trichocarpa]
Length = 795
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 78/174 (44%), Gaps = 5/174 (2%)
Query: 444 HGILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVIT-LCISLG 502
HG P Y L+ F AG E F ++ E N + + ++ LC S G
Sbjct: 585 HGSFTPDNFTYCTLIHGFSAAGYVNE--AFNLRDEMVNKGLVPNITTYNALLNGLCKS-G 641
Query: 503 WLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYE 562
+LD+A L D++HL G+ + Y L+ Y ++ PRE L GI Y
Sbjct: 642 YLDRARRLFDKLHLKGLIPNVVTYNILIDGYCKSGSPREALDLRGKMLKEGISPSIITYS 701
Query: 563 ALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKL 616
+L+ Q D A+ L EMK S + ++ F LV+GC Q+ + M+KL
Sbjct: 702 SLINGFCKQSDVEEAMKLLNEMKASNVDQT-IATFSKLVEGCIQHGDVKKMSKL 754
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 65/279 (23%), Positives = 112/279 (40%), Gaps = 37/279 (13%)
Query: 435 KQVELITTEHGILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHV 494
K V +E G+++ + + L+K + + K +E L + EKE+ V D+ A G +
Sbjct: 121 KGVLKFMSEKGVMRNKVTLTL-LIKGYCKQCKVEEAEKVLREMEKED-GVVVDEYAYGAL 178
Query: 495 ITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGI 554
I +G + A + DEM G++ + V SL+ Y + + E LL R +
Sbjct: 179 IDGYCKVGKMGDAIRVRDEMLKVGLKMNLFVCNSLINGYCKNGQVHEGERLLMCMRKLDL 238
Query: 555 QLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRS---------GHQEFE------- 598
+ D+ Y L+ + A ++ +M I + G F
Sbjct: 239 KPDSYSYCTLVDGYCRDGLSSKAFNVCDQMLRKGIEPTVVTYNTLLKGLCRFGDYKDALR 298
Query: 599 ----MLVKGCAQNHEAGLMAKLLQEVKEG--------------QRIDCGVHDWNNVIHFF 640
ML +G N E G L K G + I+ ++ +N +I+
Sbjct: 299 LWHLMLQRGVTPN-EVGYCTLLDGLFKMGDFSRALTLWDDILARGINKSIYAFNTMINGL 357
Query: 641 CKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIG 679
CK M A++ KRM LG P+ T+ ++ GY +G
Sbjct: 358 CKMGEMDGAKETFKRMEELGCKPDGITYRTLSDGYCKVG 396
Score = 52.8 bits (125), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 38/168 (22%), Positives = 73/168 (43%), Gaps = 1/168 (0%)
Query: 512 DEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQ 571
D+M + A ++ AY +A + +R+ G +L+A Y +L+ +
Sbjct: 55 DQMRRLDIVPDVFTCAIMVNAYCKAGKVERAVEFVREMEKLGFELNAVSYNSLVDGYVSL 114
Query: 572 KDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRIDCGVH 631
D GA + K M E + R+ +L+KG + + K+L+E+++ + +
Sbjct: 115 GDIEGAKGVLKFMSEKGVMRN-KVTLTLLIKGYCKQCKVEEAEKVLREMEKEDGVVVDEY 173
Query: 632 DWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIG 679
+ +I +CK M DA + M +G N +S++ GY G
Sbjct: 174 AYGALIDGYCKVGKMGDAIRVRDEMLKVGLKMNLFVCNSLINGYCKNG 221
>gi|168022838|ref|XP_001763946.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162684951|gb|EDQ71350.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 727
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 95/418 (22%), Positives = 180/418 (43%), Gaps = 44/418 (10%)
Query: 271 KAEQLLDIMPRIGVKADSNLLIIMAHIYERNGRREE----LRKLQRHIDEAVNLSDIQFR 326
+AE L+ M G++A L I+ Y R + KL+ ID ++ + +
Sbjct: 246 RAEALVADMEEQGLEATLGLYNILMDGYARCHIEAQCLNVFHKLKARIDTGLSPTAVT-- 303
Query: 327 QFYNCLLSCHLKFGDLNSASKMVLEM-LQRAKEARNSLAAAMLPFNAVGVNNRTPSEQNV 385
Y CL++ + K G + A + EM Q RN+ + ML V + + +
Sbjct: 304 --YGCLINLYTKLGKMMKALEFCKEMKAQGITLNRNTYS--MLVDGYVQLGDFANAFSVF 359
Query: 386 NCTNSVDLENSGIIENHILSYEDFTKDRKFVALEAEVKRVLQTLLGMLQKQVELITTEHG 445
+ +E + N +L + F K R ++ R +Q LLG ++ +
Sbjct: 360 EDMSEAGIEPDWVTYNILL--KAFCKSR-------QMTRAIQ-LLGRMKTRG-------- 401
Query: 446 ILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITL-CISLGWL 504
PT + YI ++ F++ G + + + + K L +A +VI + LG +
Sbjct: 402 -CSPTIQTYITIIDGFMKTGDVR-MAYKTVSEMK--LAGCRPNATTYNVIMHNLVQLGQI 457
Query: 505 DQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEAL 564
D+A ++DEM LAGV+ + Y +L++ + L+ + Y +L
Sbjct: 458 DRAASVIDEMELAGVQPNFRSYTTLMQGFASIGEIGLAFKCLKRVNEITQKPPIISYASL 517
Query: 565 LQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEA----GLMAKLLQEV 620
L++ A+ + +EM + +P + + F L+ G AQ + G+M K+ QE
Sbjct: 518 LKACCKAGRMQNAIAVTEEMAFAGVPMNNYI-FNTLLDGWAQRGDMWEAYGIMQKMRQE- 575
Query: 621 KEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAI 678
G D +H + + ++ CK MQ A + ++ M+ PN QT+ ++ G+ ++
Sbjct: 576 --GFTPD--IHSYTSFVNACCKAGDMQKATETIEEMKQQDLQPNLQTYTILIHGWTSV 629
Score = 59.3 bits (142), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 60/122 (49%), Gaps = 9/122 (7%)
Query: 614 AKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVT 673
A++ E ID VH +NN+I + + +Q A ++ M G PNA TF ++++
Sbjct: 142 ARVTFEKMRAAGIDSSVHAYNNLIRAYIMAQNLQGAVSCVEEMEIEGIFPNAATFSAIIS 201
Query: 674 GYAAIGGKYTEVTELWGEMKSFASSTSMNFDEE--LLDSVLYTFVRGGFFARANEVVAMM 731
GY + G E E W F S S N++ + S+++ + + G RA +VA M
Sbjct: 202 GYGSSGN--VEAAEKW-----FQRSVSENWNHNVAIYSSIIHAYCKAGNMERAEALVADM 254
Query: 732 EE 733
EE
Sbjct: 255 EE 256
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/189 (22%), Positives = 84/189 (44%), Gaps = 4/189 (2%)
Query: 492 GHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARS 551
G +I L LG + +A + EM G+ + + Y+ L+ Y++ ++ D
Sbjct: 305 GCLINLYTKLGKMMKALEFCKEMKAQGITLNRNTYSMLVDGYVQLGDFANAFSVFEDMSE 364
Query: 552 AGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAG 611
AGI+ D Y LL++ + A+ L MK + Q + ++ G + +
Sbjct: 365 AGIEPDWVTYNILLKAFCKSRQMTRAIQLLGRMKTRGCSPT-IQTYITIIDGFMKTGDVR 423
Query: 612 LMAKLLQEVK-EGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHS 670
+ K + E+K G R + +N ++H + + A + M G PN +++ +
Sbjct: 424 MAYKTVSEMKLAGCRPNATT--YNVIMHNLVQLGQIDRAASVIDEMELAGVQPNFRSYTT 481
Query: 671 MVTGYAAIG 679
++ G+A+IG
Sbjct: 482 LMQGFASIG 490
Score = 43.5 bits (101), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 64/304 (21%), Positives = 113/304 (37%), Gaps = 51/304 (16%)
Query: 520 RASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALH 579
+A YA L+ Y + R R+AGI Y L+++ I+ ++ GA+
Sbjct: 120 KAVERDYALLIHYYGKRGDKRGARVTFEKMRAAGIDSSVHAYNNLIRAYIMAQNLQGAVS 179
Query: 580 LFKEMK-ESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQ-EVKEGQRIDCGVHDWNNVI 637
+EM+ E P + F ++ G + K Q V E + + ++++I
Sbjct: 180 CVEEMEIEGIFPNAA--TFSAIISGYGSSGNVEAAEKWFQRSVSENWNHNVAI--YSSII 235
Query: 638 HFFCKKRLMQDAEKALKRMRSLG------------------HL----------------- 662
H +CK M+ AE + M G H+
Sbjct: 236 HAYCKAGNMERAEALVADMEEQGLEATLGLYNILMDGYARCHIEAQCLNVFHKLKARIDT 295
Query: 663 ---PNAQTFHSMVTGYAAIGGKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGG 719
P A T+ ++ Y + GK + E EMK+ + + N L+D +V+ G
Sbjct: 296 GLSPTAVTYGCLINLYTKL-GKMMKALEFCKEMKAQGITLNRNTYSMLVDG----YVQLG 350
Query: 720 FFARANEVVAMMEEGKMFIDKYKYRTLFLKYHKTLYKGKTPKFQTEAQLKKREAALGFKK 779
FA A V M E + D Y L + K+ + T Q ++K R + +
Sbjct: 351 DFANAFSVFEDMSEAGIEPDWVTYNILLKAFCKS--RQMTRAIQLLGRMKTRGCSPTIQT 408
Query: 780 WLGL 783
++ +
Sbjct: 409 YITI 412
Score = 43.5 bits (101), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 45/230 (19%), Positives = 97/230 (42%), Gaps = 7/230 (3%)
Query: 504 LDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEA 563
+ +A LL M G + Y +++ +++ R + + + AG + +A+ Y
Sbjct: 387 MTRAIQLLGRMKTRGCSPTIQTYITIIDGFMKTGDVRMAYKTVSEMKLAGCRPNATTYNV 446
Query: 564 LLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEG 623
++ + + A + EM+ + + + + + L++G A E GL K L+ V E
Sbjct: 447 IMHNLVQLGQIDRAASVIDEMELAGV-QPNFRSYTTLMQGFASIGEIGLAFKCLKRVNEI 505
Query: 624 QRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYT 683
+ + + +++ CK MQ+A + M G N F++++ G+A G
Sbjct: 506 TQ-KPPIISYASLLKACCKAGRMQNAIAVTEEMAFAGVPMNNYIFNTLLDGWAQRG---- 560
Query: 684 EVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEE 733
++ E +G M+ D S + + G +A E + M++
Sbjct: 561 DMWEAYGIMQKM-RQEGFTPDIHSYTSFVNACCKAGDMQKATETIEEMKQ 609
>gi|449438705|ref|XP_004137128.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
mitochondrial-like [Cucumis sativus]
Length = 628
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 69/331 (20%), Positives = 143/331 (43%), Gaps = 26/331 (7%)
Query: 431 GMLQKQVELIT-TEHGILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDA 489
G L+K + + E ++P Y +V + +G+ + L +++ ++ D
Sbjct: 235 GKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSSGRVEAADAILTTMKRQ--KIEPDSF 292
Query: 490 ALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDA 549
G +I+ G L++A + +EM G+R S+ +Y +L+ + +A +
Sbjct: 293 TYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLIDGFCNKGNLDMASAYKDEM 352
Query: 550 RSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKG---CAQ 606
GI S Y +L+ + +++ T A + KE++E I + +L+ G CA
Sbjct: 353 LKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGISPDAIT-YNILINGYCRCAN 411
Query: 607 NHEAGLMAK--LLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPN 664
+A L+ L +K ++ + +++H KK M++A+ K++ S G LP+
Sbjct: 412 AKKAFLLHDEMLASGIKPTKKT------YTSLLHVLSKKNRMKEADDLFKKITSEGVLPD 465
Query: 665 AQTFHSMVTGYAA---IGGKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFF 721
F++++ G+ + + G + EL +M DE ++++ R G
Sbjct: 466 VIMFNALIDGHCSNSNVKGAF----ELLKDMDRMKVPP----DEVTFNTIMQGHCREGKV 517
Query: 722 ARANEVVAMMEEGKMFIDKYKYRTLFLKYHK 752
A E+ M+ + D + TL Y +
Sbjct: 518 EEARELFDEMKRRGIKPDHISFNTLISGYSR 548
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 98/230 (42%), Gaps = 8/230 (3%)
Query: 447 LQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQ 506
+ PT Y L+ A +T E +IK +E +S D +I +
Sbjct: 357 ISPTMSTYNSLIHALFMEQRTDE-AECMIKEIQEK-GISPDAITYNILINGYCRCANAKK 414
Query: 507 AHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQ 566
A L DEM +G++ + Y SLL + NR +E L + S G+ D + AL+
Sbjct: 415 AFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEADDLFKKITSEGVLPDVIMFNALID 474
Query: 567 SKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVK-EGQR 625
+ GA L K+M K+P F +++G + + +L E+K G +
Sbjct: 475 GHCSNSNVKGAFELLKDMDRMKVP-PDEVTFNTIMQGHCREGKVEEARELFDEMKRRGIK 533
Query: 626 IDCGVH-DWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTG 674
D H +N +I + ++ ++DA + M G P T++++V G
Sbjct: 534 PD---HISFNTLISGYSRRGDIKDAFRVRNEMLDTGFNPTVLTYNALVQG 580
Score = 44.7 bits (104), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 81/384 (21%), Positives = 146/384 (38%), Gaps = 33/384 (8%)
Query: 248 AMKPNTNTFNIALAGCLLFETTRKAEQLLDIMPRIGVKADSNLLIIMAHIYERNGRREEL 307
+KPN T+N + G A+ +L M R ++ DS + + GR EE
Sbjct: 251 GVKPNIVTYNTIVHGYCSSGRVEAADAILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEA 310
Query: 308 RKL-QRHIDEAVNLSDIQFRQFYNCLLSCHLKFGDLNSASKMVLEMLQRAKEARNSLAAA 366
K+ + + + + S + YN L+ G+L+ AS EML++ S +
Sbjct: 311 SKIFEEMVQKGLRPSAV----IYNTLIDGFCNKGNLDMASAYKDEMLKKGISPTMSTYNS 366
Query: 367 MLPFNAVGVNNRTP-SEQNVNCTNSVDLENSGIIENHILS-YEDFTKDRKFVALEAEVKR 424
++ +A+ + RT +E + + I N +++ Y +K L E
Sbjct: 367 LI--HALFMEQRTDEAECMIKEIQEKGISPDAITYNILINGYCRCANAKKAFLLHDE--- 421
Query: 425 VLQTLLGMLQKQVELITTEHGILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQV 484
ML + +PT+K Y L+ + + KE K E V
Sbjct: 422 -------MLASGI----------KPTKKTYTSLLHVLSKKNRMKEADDLFKKITSEG--V 462
Query: 485 SHDDAALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTA 544
D +I S + A +LL +M V + ++++ + + E
Sbjct: 463 LPDVIMFNALIDGHCSNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQGHCREGKVEEARE 522
Query: 545 LLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGC 604
L + + GI+ D + L+ + D A + EM ++ + LV+G
Sbjct: 523 LFDEMKRRGIKPDHISFNTLISGYSRRGDIKDAFRVRNEMLDTGF-NPTVLTYNALVQGL 581
Query: 605 AQNHEAGLMAKLLQE-VKEGQRID 627
+N E L +LL+E V +G D
Sbjct: 582 CKNQEGDLAEELLKEMVSKGMTPD 605
Score = 40.4 bits (93), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 46/234 (19%), Positives = 93/234 (39%), Gaps = 7/234 (2%)
Query: 449 PTEKIYIKLVKAFLEAGKT---KELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLD 505
P+ K + L+K L G T +E+ FL A ++ L ++I C + D
Sbjct: 111 PSPKPALHLLKQALGGGTTNSIREIFEFL-AASRDRLGFK-SSIVFDYLIKSCCDMNRAD 168
Query: 506 QAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALL 565
+A + M GV + SLL +++ NR L + I+ + ++
Sbjct: 169 EAFECFYTMKEKGVLPTIETCNSLLSLFLKLNRTEAAWVLYAEMFRLRIKSSVYTFNIMI 228
Query: 566 QSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQR 625
+ A M+ S + + + +V G + +L +K Q+
Sbjct: 229 NVLCKEGKLKKAKDFVGHMETSGV-KPNIVTYNTIVHGYCSSGRVEAADAILTTMKR-QK 286
Query: 626 IDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIG 679
I+ + ++I CK+ +++A K + M G P+A +++++ G+ G
Sbjct: 287 IEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLIDGFCNKG 340
>gi|356519743|ref|XP_003528529.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g11690-like [Glycine max]
Length = 556
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 66/291 (22%), Positives = 126/291 (43%), Gaps = 9/291 (3%)
Query: 457 LVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQAHDLLDEMHL 516
++K EAG + F + A E +S + +I C G + A +L +M+
Sbjct: 164 MIKGCCEAGYF--VKGFRLLAMLEEFGLSPNVVIYTTLIDGCCKDGNVMLAKNLFCKMNR 221
Query: 517 AGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQKDTPG 576
G+ + Y+ L+ + + RE + + + +GI +A Y L+
Sbjct: 222 LGLVPNPHTYSVLMNGFFKQGLQREGFQMYENMKRSGIVPNAYAYNCLISEYCNDGMVDK 281
Query: 577 ALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRIDCGVHDWNNV 636
A +F EM+E I G + +L+ G + + G KL+ +V + + + +N +
Sbjct: 282 AFKVFAEMREKGIA-CGVMTYNILIGGLCRGKKFGEAVKLVHKVNK-VGLSPNIVTYNIL 339
Query: 637 IHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEMKSFA 696
I+ FC R M A + +++S G P T+++++ GY+ + +L EM+
Sbjct: 340 INGFCDVRKMDSAVRLFNQLKSSGLSPTLVTYNTLIAGYSKV-ENLAGALDLVKEMEERC 398
Query: 697 SSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFIDKYKYRTLF 747
+ S L+D+ F R +A E+ ++ME+ + D Y Y L
Sbjct: 399 IAPSKVTYTILIDA----FARLNHTEKACEMHSLMEKSGLVPDVYTYSVLL 445
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 55/270 (20%), Positives = 107/270 (39%), Gaps = 17/270 (6%)
Query: 483 QVSHDDAALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREV 542
+V D + G +I C G+ + LL + G+ + +Y +L+ +
Sbjct: 153 KVVLDAYSFGIMIKGCCEAGYFVKGFRLLAMLEEFGLSPNVVIYTTLIDGCCKDGNVMLA 212
Query: 543 TALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVK 602
L G+ + Y L+ Q +++ MK S I + + + L+
Sbjct: 213 KNLFCKMNRLGLVPNPHTYSVLMNGFFKQGLQREGFQMYENMKRSGIVPNAY-AYNCLIS 271
Query: 603 GCAQNHEAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHL 662
+ K+ E++E + I CGV +N +I C+ + +A K + ++ +G
Sbjct: 272 EYCNDGMVDKAFKVFAEMRE-KGIACGVMTYNILIGGLCRGKKFGEAVKLVHKVNKVGLS 330
Query: 663 PNAQTFHSMVTGYAAIGGKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGF-- 720
PN T++ ++ G+ + K L+ ++KS S ++ V Y + G+
Sbjct: 331 PNIVTYNILINGFCDV-RKMDSAVRLFNQLKSSGLSPTL---------VTYNTLIAGYSK 380
Query: 721 ---FARANEVVAMMEEGKMFIDKYKYRTLF 747
A A ++V MEE + K Y L
Sbjct: 381 VENLAGALDLVKEMEERCIAPSKVTYTILI 410
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 83/180 (46%), Gaps = 8/180 (4%)
Query: 506 QAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALL 565
+A L+ +++ G+ + Y L+ + + + L +S+G+ Y L+
Sbjct: 316 EAVKLVHKVNKVGLSPNIVTYNILINGFCDVRKMDSAVRLFNQLKSSGLSPTLVTYNTLI 375
Query: 566 QSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQ-NH--EAGLMAKLLQEVKE 622
++ GAL L KEM+E I S + +L+ A+ NH +A M L++ K
Sbjct: 376 AGYSKVENLAGALDLVKEMEERCIAPS-KVTYTILIDAFARLNHTEKACEMHSLME--KS 432
Query: 623 GQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKY 682
G D V+ ++ ++H C M++A K K + + PN+ +++M+ GY G Y
Sbjct: 433 GLVPD--VYTYSVLLHGLCVHGNMKEASKLFKSLGEMHLQPNSVIYNTMIHGYCKEGSSY 490
>gi|357111163|ref|XP_003557384.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g41720-like [Brachypodium distachyon]
Length = 821
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 98/498 (19%), Positives = 213/498 (42%), Gaps = 34/498 (6%)
Query: 248 AMKPNTNTFNIALAGCLLFETTRKAEQLLDIMPRIGVKAD--SNLLIIMAHIYERNGRRE 305
A+ P+ T+N + C +KA +L M R GV D ++ +++ A +NG +
Sbjct: 220 AIPPSRTTYNNVINACGAAGNWKKALELCKKMTRNGVGPDLVTHNIVLSAF---KNGSQY 276
Query: 306 ELRKLQRHIDEAVNLSDIQFRQFYNCLLSCHLKFGDLNSASKMVLEMLQRAKEARNSLAA 365
+ + N++ F N ++ C +K G A +E+L +E R
Sbjct: 277 SKAIAYFEMMKGANIAPDTFT--LNIVIHCLVKDGQYGEA----IELLNSMREKRTQCPP 330
Query: 366 AMLPFNAVGVNNRTPSEQNVNCTNSVDLENSGIIENHILSYEDFTKDRKFVALEAEVKRV 425
++ + ++ +++ + +C D+ + ++ +I+SY + A+
Sbjct: 331 DVVTYTSI-MHSYYVCGKVEDCKAVFDMMVAEGVKPNIVSYNALLGAYASRGMHADA--- 386
Query: 426 LQTLLGMLQKQVELITTEHGILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVS 485
LG+ + + ++G L+P Y L+ A+ +G+ ++ + K + +
Sbjct: 387 ----LGIFK-----LLKQNG-LRPDVVSYTTLLNAYGRSGQPEKAREAFKEMRKNSCR-- 434
Query: 486 HDDAALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTAL 545
+ + +I S G +A LL EM G+ ++LL A + ++ +
Sbjct: 435 PNIVSYNALIDAYGSAGMFKEAISLLHEMEKDGIPPDVVSISTLLTACGRCRQITKIDTI 494
Query: 546 LRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCA 605
L A+S GI+L+ CY + + S + D AL L+ M S + + +L+ G
Sbjct: 495 LEAAKSRGIKLNIVCYNSGIGSYLNFGDYGKALELYAVMMASNV-NPDAVTYNILISGLC 553
Query: 606 QNHEAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNA 665
+ + K +++ + RI ++++I + K+ + +AE M+ G LP+
Sbjct: 554 KVGKYAESLKFFEDMVD-LRIPLTKEVYSSLICSYVKQGKLTEAESTFSSMKESGCLPDV 612
Query: 666 QTFHSMVTGYAAIGGKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARAN 725
T+ +M+ Y G + +L+ EM+ ++ D + S++ RG R
Sbjct: 613 LTYTAMIEAYND-DGSWRNAWDLFKEME----GNTVQPDAIICSSLMEALNRGSQHERVL 667
Query: 726 EVVAMMEEGKMFIDKYKY 743
+++ +M+E + +++ Y
Sbjct: 668 QLMELMKEKCIPLNQKAY 685
Score = 39.3 bits (90), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 49/247 (19%), Positives = 95/247 (38%), Gaps = 7/247 (2%)
Query: 447 LQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQ 506
+ P Y L+ + GK E F + +L++ +I + G L +
Sbjct: 538 VNPDAVTYNILISGLCKVGKYAESLKFF--EDMVDLRIPLTKEVYSSLICSYVKQGKLTE 595
Query: 507 AHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQ 566
A M +G Y ++++AY + R L ++ +Q DA +L++
Sbjct: 596 AESTFSSMKESGCLPDVLTYTAMIEAYNDDGSWRNAWDLFKEMEGNTVQPDAIICSSLME 655
Query: 567 SKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRI 626
+ L L + MKE IP + FE ++ C+ + +++++ + +
Sbjct: 656 ALNRGSQHERVLQLMELMKEKCIPLNQKAYFE-IIASCSMLRDWKTASEIIEHL-DSSLS 713
Query: 627 DCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGG--KYTE 684
V N+++ F K + K +M S T+ ++ A+G KY E
Sbjct: 714 SISVGTLNHLLTFLGKCGKTECMMKLFYKMMSSCSTVGVSTYTVLLRNLLAVGKWRKYIE 773
Query: 685 VTELWGE 691
V + W E
Sbjct: 774 VLQ-WME 779
>gi|53793262|dbj|BAD54485.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
Length = 713
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 126/577 (21%), Positives = 230/577 (39%), Gaps = 89/577 (15%)
Query: 187 ILRKLVATEQYPPVTAWSAILAHMSLTAPG---AYLAAELILEIGYLFQDGRVDPRKKCN 243
+L +LVA + P + A L H + A G + LA+ + + L G +D +
Sbjct: 87 VLSRLVALRR-PHLAASLVDLLHRAALALGPRRSALASVVDTLLSVLADRGLLDDAVRAV 145
Query: 244 APL--IAMKPNTNTFNIALAGCLLFETTRKAEQLLDIMPRIGVKADSNLLIIMAHIYERN 301
A + + + PNT T N L + R +L + +P V + I+ +
Sbjct: 146 ARVRELRVPPNTRTCNHILLRLARDRSGRLVRRLFEQLPAPNVFTFN----IVIDFLCKE 201
Query: 302 GRREELRKLQRHIDEAVNLSDIQFRQFYNCLLSCHLKFGDLNSASKMVLEMLQRAKEARN 361
G E R L + E L D+ +N L+ + K G+L+ ++V EM R+
Sbjct: 202 GELAEARSLFSRMKEMGCLPDVVT---FNSLIDGYGKCGELDEVEQLVEEM------RRS 252
Query: 362 SLAAAMLPFNAVGVNNRTPSEQNVNCTNSVD-----------LENSGIIENHILSYEDFT 410
A ++ +NA+ +NC ++ G++ N ++++ F
Sbjct: 253 GCKADVVTYNAL-----------INCFCKFGRMETAYGYFAAMKREGVMAN-VVTFSTFV 300
Query: 411 KDRKFVALEAEVKRVLQTLLGMLQKQVELITTEHGILQPTEKIYIKLVKAFLEAGKTKEL 470
F E V+ ++ M + + L E Y L+ +AG+ +
Sbjct: 301 D--AFCK-EGLVREAMKLFAQMRVRGMAL----------NEFTYTCLIDGTCKAGRLDDA 347
Query: 471 THFLIKAEKENLQVSHDDAALGHVITLCISLGWL------DQAHDLLDEMHLAGVRASSS 524
L + ++ + + +V+T + + L +A D+L M AGVRA+
Sbjct: 348 IVLLDEMVRQGVPL--------NVVTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANEL 399
Query: 525 VYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEM 584
+Y +L+ + + LL + ++ G++LD S Y AL+Q A L +M
Sbjct: 400 LYTTLIHGHFMNKNSEKALGLLSEMKNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKM 459
Query: 585 KESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRIDCG----VHDWNNVIHFF 640
ES + + + ++ C ++ + +LQ++ +D G V + +I
Sbjct: 460 DESGL-EPNYIIYTTMMDACFKSGKVPEAIAMLQKI-----LDSGFQPNVITYCALIDGL 513
Query: 641 CKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEMKSFASSTS 700
CK + +A +MR LG PN Q + ++V G G E +L+ EM S
Sbjct: 514 CKAGSIDEAISHFNKMRDLGLDPNVQAYTALVDGLCK-NGCLNEAVQLFNEMVHKGMS-- 570
Query: 701 MNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMF 737
LD V+YT + G+ + N A + KM
Sbjct: 571 -------LDKVVYTALLDGYLKQGNLHDAFALKAKMI 600
Score = 46.6 bits (109), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 65/156 (41%), Gaps = 10/156 (6%)
Query: 430 LGMLQKQVELITTEHGILQPTEKIYIKLVKAFLEAGKTKE-LTHFLIKAEKENLQVSHDD 488
+ MLQK ++ QP Y L+ +AG E ++HF + +L + +
Sbjct: 488 IAMLQKILD------SGFQPNVITYCALIDGLCKAGSIDEAISHF---NKMRDLGLDPNV 538
Query: 489 AALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRD 548
A ++ G L++A L +EM G+ VY +LL Y++ + AL
Sbjct: 539 QAYTALVDGLCKNGCLNEAVQLFNEMVHKGMSLDKVVYTALLDGYLKQGNLHDAFALKAK 598
Query: 549 ARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEM 584
+G+QLD CY + P A +F EM
Sbjct: 599 MIDSGLQLDLFCYTCFISGFCNLNMMPEAREVFSEM 634
Score = 41.2 bits (95), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 54/270 (20%), Positives = 107/270 (39%), Gaps = 30/270 (11%)
Query: 502 GWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQ------ 555
G LD+ L++EM +G +A Y +L+ + + R + G+
Sbjct: 237 GELDEVEQLVEEMRRSGCKADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTF 296
Query: 556 ---LDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGL 612
+DA C E L++ A+ LF +M+ + + + L+ G +
Sbjct: 297 STFVDAFCKEGLVRE---------AMKLFAQMRVRGMALNEFT-YTCLIDGTCKAGRLDD 346
Query: 613 MAKLLQE-VKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSM 671
LL E V++G ++ V + ++ CK+R + +AE L+ M G N + ++
Sbjct: 347 AIVLLDEMVRQGVPLN--VVTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTL 404
Query: 672 VTGYAAIGGKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMM 731
+ G+ + + L EMK + + D L +++ A ++ M
Sbjct: 405 IHGH-FMNKNSEKALGLLSEMK----NKGLELDISLYGALIQGLCNVHKLDEAKSLLTKM 459
Query: 732 EEGKMFIDKYKYRTLFLKYHKTLYKGKTPK 761
+E + + Y T+ K+ GK P+
Sbjct: 460 DESGLEPNYIIYTTMMDACFKS---GKVPE 486
>gi|449451896|ref|XP_004143696.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
mitochondrial-like [Cucumis sativus]
Length = 1032
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 101/482 (20%), Positives = 188/482 (39%), Gaps = 66/482 (13%)
Query: 249 MKPNTNTFNIALAGCLLFETTRKAEQLLDIMPRIGVKADSNLLIIMAHIYERNGRREELR 308
+ P+ T+++ ++G +KA ++LD M R GVK + + + Y + R E
Sbjct: 447 LTPSPFTYSVLISGLCHSSDLQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAI 506
Query: 309 KLQRHIDEAVNLSDIQFRQFYNCLLSCHLKFGDLNSASKMVLEMLQRAKEARNSLAAAML 368
+L + + L D+ YNCL+ + + A ++++M ++ + A +
Sbjct: 507 ELLKIMIANGVLPDL---FCYNCLIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFI 563
Query: 369 PFNAVGVNNRTPSEQNVNCTNSVDLENSGIIENHILSYEDFTKDRKFVALEAEVKRVLQT 428
+ E V D+ +SGI+ N+++ Y K V E L T
Sbjct: 564 NLYS------KSGEIQVAERYFKDMLSSGIVPNNVI-YTILIKGHCDVGNTVE---ALST 613
Query: 429 LLGMLQKQVELITTEHGILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDD 488
ML+K L P + Y ++ + + GKTKE +K K V D
Sbjct: 614 FKCMLEKG----------LIPDIRAYSAIIHSLSKNGKTKEAMGVFLKFLKTG--VVPDV 661
Query: 489 AALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRD 548
+I+ G +++A L DEM G+ + VY +L+ + + L +
Sbjct: 662 FLYNSLISGFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLINGLCKLGEVTKARELFDE 721
Query: 549 ARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNH 608
+ D Y ++ + A LF EM I G+ + +L+ GC +
Sbjct: 722 IEEKDLVPDVVTYSTIIDGYCKSGNLTEAFKLFDEMISKGISPDGYI-YCILIDGCGKE- 779
Query: 609 EAGLMAKLLQEVKEGQRIDCG-VHDWNNVIHFFC-------------------------- 641
G + K L E Q+ G + +N++I FC
Sbjct: 780 --GNLEKALSLFHEAQQKSVGSLSAFNSLIDSFCKHGKVIEARELFDDMVDKKLTPNIVT 837
Query: 642 ---------KKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEM 692
K +M++AE+ M + +PN T+ S++ Y IG ++ ++ L+ +M
Sbjct: 838 YTILIDAYGKAEMMEEAEQLFLDMETRNIIPNTLTYTSLLLSYNQIGNRFKMIS-LFKDM 896
Query: 693 KS 694
++
Sbjct: 897 EA 898
Score = 56.2 bits (134), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 107/508 (21%), Positives = 219/508 (43%), Gaps = 66/508 (12%)
Query: 250 KPNTNTFNIALAGCLLFETTRKAEQLLDIMPRIGVKADSNLLIIMAHIYERNGRREELRK 309
KPN T+N + G +A ++ +M G+ D + ++ + + R +E
Sbjct: 273 KPNLFTYNAFIGGLCQTGAVDEALEVKKLMMEKGLGPDGHTYTLLVDGFCKQKRSKE--- 329
Query: 310 LQRHIDEAVNLSDIQFRQF-YNCLLSCHLKFGDLNSASKMVLEMLQRAKEAR-------- 360
+ I E++ S + +F Y L+ +K G++ A ++ EM+ R +
Sbjct: 330 -AKLIFESMPSSGLNPNRFTYTALIDGFIKEGNIEEALRIKDEMITRGLKLNVVTYNAMI 388
Query: 361 ------NSLAAAMLPFNAVGVNNRTPSEQNVNCTNSVDLENSGIIENHILSYEDFTKDRK 414
+A AM FN + + P T + +L G +++H D K +
Sbjct: 389 GGIAKAGEMAKAMSLFNEMLMAGLEPD------TWTYNLLIDGYLKSH-----DMAKACE 437
Query: 415 FVALEAEVKRVLQT-------LLGM-----LQKQVELI--TTEHGILQPTEKIYIKLVKA 460
+A E + +++ + + G+ LQK E++ +G+ +P +Y L+KA
Sbjct: 438 LLA-EMKARKLTPSPFTYSVLISGLCHSSDLQKANEVLDQMIRNGV-KPNVFMYGTLIKA 495
Query: 461 FLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQAHDLLDEMHLAGVR 520
+++ + E+ L+K N + +I LC + +++A LL +M G++
Sbjct: 496 YVQESRY-EMAIELLKIMIANGVLPDLFCYNCLIIGLCRA-KKVEEAKMLLVDMGEKGIK 553
Query: 521 ASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHL 580
++ Y + + Y ++ + +D S+GI + Y L++ +T AL
Sbjct: 554 PNAHTYGAFINLYSKSGEIQVAERYFKDMLSSGIVPNNVIYTILIKGHCDVGNTVEALST 613
Query: 581 FKEMKESK-IPRSGHQEFEMLVKGCAQNHEAG-LMAKLLQEVKEGQRIDCGVHDWNNVIH 638
FK M E IP + + ++ ++N + M L+ +K G D V +N++I
Sbjct: 614 FKCMLEKGLIPDI--RAYSAIIHSLSKNGKTKEAMGVFLKFLKTGVVPD--VFLYNSLIS 669
Query: 639 FFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEMKSFASS 698
FCK+ ++ A + M G PN +++++ G + G+ T+ EL+ E++
Sbjct: 670 GFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLINGLCKL-GEVTKARELFDEIE----- 723
Query: 699 TSMNFDEELL-DSVLYTFVRGGFFARAN 725
+++L+ D V Y+ + G+ N
Sbjct: 724 -----EKDLVPDVVTYSTIIDGYCKSGN 746
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 56/285 (19%), Positives = 117/285 (41%), Gaps = 42/285 (14%)
Query: 504 LDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEA 563
L +A+++LD+M GV+ + +Y +L+KAY++ +R LL+ + G+ D CY
Sbjct: 467 LQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIMIANGVLPDLFCYNC 526
Query: 564 LLQSKIVQKDTPGALHLFKEMKESKIPRSGHQE--------------------------- 596
L+ K A L +M E I + H
Sbjct: 527 LIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAERYFKDMLSSG 586
Query: 597 -------FEMLVKG-CAQNHEAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQD 648
+ +L+KG C + ++ +++G D + ++ +IH K ++
Sbjct: 587 IVPNNVIYTILIKGHCDVGNTVEALSTFKCMLEKGLIPD--IRAYSAIIHSLSKNGKTKE 644
Query: 649 AEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEMKSFASSTSMNFDEELL 708
A + G +P+ ++S+++G+ G + ++L+ EM +N + +
Sbjct: 645 AMGVFLKFLKTGVVPDVFLYNSLISGFCK-EGDIEKASQLYDEML----HNGINPNIVVY 699
Query: 709 DSVLYTFVRGGFFARANEVVAMMEEGKMFIDKYKYRTLFLKYHKT 753
++++ + G +A E+ +EE + D Y T+ Y K+
Sbjct: 700 NTLINGLCKLGEVTKARELFDEIEEKDLVPDVVTYSTIIDGYCKS 744
>gi|115468576|ref|NP_001057887.1| Os06g0565000 [Oryza sativa Japonica Group]
gi|113595927|dbj|BAF19801.1| Os06g0565000 [Oryza sativa Japonica Group]
gi|125597608|gb|EAZ37388.1| hypothetical protein OsJ_21726 [Oryza sativa Japonica Group]
Length = 687
Score = 70.1 bits (170), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 126/577 (21%), Positives = 230/577 (39%), Gaps = 89/577 (15%)
Query: 187 ILRKLVATEQYPPVTAWSAILAHMSLTAPG---AYLAAELILEIGYLFQDGRVDPRKKCN 243
+L +LVA + P + A L H + A G + LA+ + + L G +D +
Sbjct: 87 VLSRLVALRR-PHLAASLVDLLHRAALALGPRRSALASVVDTLLSVLADRGLLDDAVRAV 145
Query: 244 APL--IAMKPNTNTFNIALAGCLLFETTRKAEQLLDIMPRIGVKADSNLLIIMAHIYERN 301
A + + + PNT T N L + R +L + +P V + I+ +
Sbjct: 146 ARVRELRVPPNTRTCNHILLRLARDRSGRLVRRLFEQLPAPNVFTFN----IVIDFLCKE 201
Query: 302 GRREELRKLQRHIDEAVNLSDIQFRQFYNCLLSCHLKFGDLNSASKMVLEMLQRAKEARN 361
G E R L + E L D+ +N L+ + K G+L+ ++V EM R+
Sbjct: 202 GELAEARSLFSRMKEMGCLPDVVT---FNSLIDGYGKCGELDEVEQLVEEM------RRS 252
Query: 362 SLAAAMLPFNAVGVNNRTPSEQNVNCTNSVD-----------LENSGIIENHILSYEDFT 410
A ++ +NA+ +NC ++ G++ N ++++ F
Sbjct: 253 GCKADVVTYNAL-----------INCFCKFGRMETAYGYFAAMKREGVMAN-VVTFSTFV 300
Query: 411 KDRKFVALEAEVKRVLQTLLGMLQKQVELITTEHGILQPTEKIYIKLVKAFLEAGKTKEL 470
F E V+ ++ M + + L E Y L+ +AG+ +
Sbjct: 301 D--AFCK-EGLVREAMKLFAQMRVRGMAL----------NEFTYTCLIDGTCKAGRLDDA 347
Query: 471 THFLIKAEKENLQVSHDDAALGHVITLCISLGWL------DQAHDLLDEMHLAGVRASSS 524
L + ++ + + +V+T + + L +A D+L M AGVRA+
Sbjct: 348 IVLLDEMVRQGVPL--------NVVTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANEL 399
Query: 525 VYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEM 584
+Y +L+ + + LL + ++ G++LD S Y AL+Q A L +M
Sbjct: 400 LYTTLIHGHFMNKNSEKALGLLSEMKNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKM 459
Query: 585 KESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRIDCG----VHDWNNVIHFF 640
ES + + + ++ C ++ + +LQ++ +D G V + +I
Sbjct: 460 DESGL-EPNYIIYTTMMDACFKSGKVPEAIAMLQKI-----LDSGFQPNVITYCALIDGL 513
Query: 641 CKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEMKSFASSTS 700
CK + +A +MR LG PN Q + ++V G G E +L+ EM S
Sbjct: 514 CKAGSIDEAISHFNKMRDLGLDPNVQAYTALVDGLCK-NGCLNEAVQLFNEMVHKGMS-- 570
Query: 701 MNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMF 737
LD V+YT + G+ + N A + KM
Sbjct: 571 -------LDKVVYTALLDGYLKQGNLHDAFALKAKMI 600
Score = 46.6 bits (109), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 65/156 (41%), Gaps = 10/156 (6%)
Query: 430 LGMLQKQVELITTEHGILQPTEKIYIKLVKAFLEAGKTKE-LTHFLIKAEKENLQVSHDD 488
+ MLQK ++ QP Y L+ +AG E ++HF + +L + +
Sbjct: 488 IAMLQKILD------SGFQPNVITYCALIDGLCKAGSIDEAISHF---NKMRDLGLDPNV 538
Query: 489 AALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRD 548
A ++ G L++A L +EM G+ VY +LL Y++ + AL
Sbjct: 539 QAYTALVDGLCKNGCLNEAVQLFNEMVHKGMSLDKVVYTALLDGYLKQGNLHDAFALKAK 598
Query: 549 ARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEM 584
+G+QLD CY + P A +F EM
Sbjct: 599 MIDSGLQLDLFCYTCFISGFCNLNMMPEAREVFSEM 634
>gi|15234269|ref|NP_192906.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75213756|sp|Q9T0D6.1|PP306_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g11690
gi|4539460|emb|CAB39940.1| putative protein [Arabidopsis thaliana]
gi|7267869|emb|CAB78212.1| putative protein [Arabidopsis thaliana]
gi|91806660|gb|ABE66057.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332657639|gb|AEE83039.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 566
Score = 70.1 bits (170), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 110/243 (45%), Gaps = 11/243 (4%)
Query: 443 EHGILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVIT-LCISL 501
E G+ P Y ++ + G+TK+ F + E VS + +I LC +
Sbjct: 261 EDGVF-PNLYTYNCVMNQLCKDGRTKD--AFQVFDEMRERGVSCNIVTYNTLIGGLCREM 317
Query: 502 GWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCY 561
L++A+ ++D+M G+ + Y +L+ + + + +L RD +S G+ Y
Sbjct: 318 K-LNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTY 376
Query: 562 EALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQ--NHEAGLMAKLLQE 619
L+ + DT GA + KEM+E I S + +L+ A+ N E + +L E
Sbjct: 377 NILVSGFCRKGDTSGAAKMVKEMEERGIKPS-KVTYTILIDTFARSDNMEKAIQLRLSME 435
Query: 620 VKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIG 679
+ G D VH ++ +IH FC K M +A + K M PN +++M+ GY G
Sbjct: 436 -ELGLVPD--VHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEG 492
Query: 680 GKY 682
Y
Sbjct: 493 SSY 495
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/271 (19%), Positives = 120/271 (44%), Gaps = 7/271 (2%)
Query: 483 QVSHDDAALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREV 542
+V D + G +I C G ++++ DLL E+ G + +Y +L+ + +
Sbjct: 158 KVVLDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKA 217
Query: 543 TALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVK 602
L + G+ + Y L+ ++++M+E + + + + ++
Sbjct: 218 KDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYT-YNCVMN 276
Query: 603 GCAQNHEAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHL 662
++ ++ E++E + + C + +N +I C++ + +A K + +M+S G
Sbjct: 277 QLCKDGRTKDAFQVFDEMRE-RGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGIN 335
Query: 663 PNAQTFHSMVTGYAAIGGKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFA 722
PN T+++++ G+ + GK + L ++KS S S+ + ++ F R G +
Sbjct: 336 PNLITYNTLIDGFCGV-GKLGKALSLCRDLKSRGLSPSL----VTYNILVSGFCRKGDTS 390
Query: 723 RANEVVAMMEEGKMFIDKYKYRTLFLKYHKT 753
A ++V MEE + K Y L + ++
Sbjct: 391 GAAKMVKEMEERGIKPSKVTYTILIDTFARS 421
Score = 43.5 bits (101), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 36/164 (21%), Positives = 69/164 (42%), Gaps = 2/164 (1%)
Query: 502 GWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCY 561
G A ++ EM G++ S Y L+ + ++ + L G+ D Y
Sbjct: 387 GDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTY 446
Query: 562 EALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVK 621
L+ ++ A LFK M E K + ++ G + + KLL+E++
Sbjct: 447 SVLIHGFCIKGQMNEASRLFKSMVE-KNCEPNEVIYNTMILGYCKEGSSYRALKLLKEME 505
Query: 622 EGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNA 665
E + + V + +I CK+R ++AE+ +++M G P+
Sbjct: 506 E-KELAPNVASYRYMIEVLCKERKSKEAERLVEKMIDSGIDPST 548
>gi|242047600|ref|XP_002461546.1| hypothetical protein SORBIDRAFT_02g004520 [Sorghum bicolor]
gi|241924923|gb|EER98067.1| hypothetical protein SORBIDRAFT_02g004520 [Sorghum bicolor]
Length = 532
Score = 70.1 bits (170), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 66/276 (23%), Positives = 114/276 (41%), Gaps = 20/276 (7%)
Query: 483 QVSHDDAALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPRE- 541
+V+ D A G +I+ C G L+ L ++ G+RA + + LL+ R +
Sbjct: 8 KVAPDIATFGILISCCCDAGCLNLGFAALGQIIKTGLRADAVAFTPLLRTLCAKKRTSDA 67
Query: 542 VTALLRDARSAGIQLDASCYEALLQSKIVQKDTPGA---LHLFKEMKESKIPRSGHQEFE 598
+ +LR G D Y LL+ +K A +H+ E ++ P +
Sbjct: 68 MNIVLRRMPELGCTPDVFSYSTLLKGLCAEKKCEEAAELIHMMAEDGDNCPPDV--VSYS 125
Query: 599 MLVKGCAQNHEAG----LMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALK 654
++ G + + G L K+L + C N+VI CK + M AE L+
Sbjct: 126 TVIHGFFKEGDVGKAYTLFCKMLDHGIPPNVVTC-----NSVIDGLCKVQAMDKAEAVLQ 180
Query: 655 RMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYT 714
+M +PN T++S++ GY + G++TE + EM ++ L+D +
Sbjct: 181 QMIDEHIMPNCTTYNSLIHGYLS-SGQWTEAVRILKEMSRDGQRPNVVTYNMLIDCL--- 236
Query: 715 FVRGGFFARANEVVAMMEEGKMFIDKYKYRTLFLKY 750
+ GF A A E+ M + D Y +L Y
Sbjct: 237 -CKSGFHAEAREIFNSMIQSGPKPDATTYGSLLHGY 271
Score = 45.8 bits (107), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 85/197 (43%), Gaps = 9/197 (4%)
Query: 499 ISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDA 558
+S G +A +L EM G R + Y L+ ++ E + +G + DA
Sbjct: 202 LSSGQWTEAVRILKEMSRDGQRPNVVTYNMLIDCLCKSGFHAEAREIFNSMIQSGPKPDA 261
Query: 559 SCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKG---CAQNHEAGLMAK 615
+ Y +LL + + ++ K++ RS H F + + C + EA L
Sbjct: 262 TTYGSLLHGYATEGNLV-EMNNVKDLMVQNGMRSNHHTFSIEIYAYCKCGRLDEASLTFI 320
Query: 616 LLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGY 675
+Q++ G D + + VI CK + DA +M G PN TF +++ G+
Sbjct: 321 KMQQL--GFMPD--IVTYTTVIDGLCKIGRLDDAMSRFCQMIDDGLSPNIITFTTLIHGF 376
Query: 676 AAIGGKYTEVTELWGEM 692
++ GK+ + EL+ EM
Sbjct: 377 -SMYGKWEKAEELFYEM 392
>gi|449467169|ref|XP_004151297.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g21222-like [Cucumis sativus]
gi|449518833|ref|XP_004166440.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g21222-like [Cucumis sativus]
Length = 609
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 73/327 (22%), Positives = 138/327 (42%), Gaps = 40/327 (12%)
Query: 448 QPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQA 507
+PT Y LV A + K ++ L +E E + D L +I G + +A
Sbjct: 89 RPTTVTYTALVAALTRQKRFKAISGLL--SEMEETGIKPDSILLNAIINAFSESGNVKEA 146
Query: 508 HDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLR-DARSAGIQLDASCYEALLQ 566
++ +M +G + ++S + +L+K Y +P E LL R+ ++ + Y L+
Sbjct: 147 MEIFQKMEESGCKPTTSTFNTLIKGYGIIRKPEESMKLLELMTRTTNLKPNNRTYNILVG 206
Query: 567 SKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAG-----LMAKLLQEVK 621
+ +K A ++ +M S + + + L + AQ+ E ++ L ++V
Sbjct: 207 ALCKKKSIKEAWNVVHQMLASGV-QPDVVTYNTLARAYAQDGETNKAESIIVDMLNKKVN 265
Query: 622 EGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIG-- 679
+R CG+ ++ +C++ + +A + + RMR LG PN F+S++ G+ IG
Sbjct: 266 PNERT-CGI-----IVGGYCEQGNLAEALRVVYRMRDLGIHPNLVIFNSLIKGFLDIGDS 319
Query: 680 -------------GKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGF------ 720
G +V M ++S+ M+ +E+ D +L + +
Sbjct: 320 DGVDKALTMMEESGVKPDVITFSTIMNGWSSAGRMDKCQEIFDDMLKSGIEPDIHVFSIL 379
Query: 721 ---FARANEVVAMMEEGKMFIDKYKYR 744
F RA E V E F+ KY R
Sbjct: 380 AKGFVRAGEPVK-AESLLNFMSKYGVR 405
Score = 55.8 bits (133), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 38/186 (20%), Positives = 86/186 (46%), Gaps = 1/186 (0%)
Query: 494 VITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAG 553
++ + + G +A + + + G R ++ Y +L+ A R + ++ LL + G
Sbjct: 63 LMNILVERGKPQEAQFIFNSLVEQGHRPTTVTYTALVAALTRQKRFKAISGLLSEMEETG 122
Query: 554 IQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLM 613
I+ D+ A++ + + A+ +F++M+ES + F L+KG +
Sbjct: 123 IKPDSILLNAIINAFSESGNVKEAMEIFQKMEESGC-KPTTSTFNTLIKGYGIIRKPEES 181
Query: 614 AKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVT 673
KLL+ + + +N ++ CKK+ +++A + +M + G P+ T++++
Sbjct: 182 MKLLELMTRTTNLKPNNRTYNILVGALCKKKSIKEAWNVVHQMLASGVQPDVVTYNTLAR 241
Query: 674 GYAAIG 679
YA G
Sbjct: 242 AYAQDG 247
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 55/268 (20%), Positives = 114/268 (42%), Gaps = 8/268 (2%)
Query: 447 LQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQ 506
+QP Y L +A+ + G+T + ++ + N +V+ ++ G ++ G L +
Sbjct: 229 VQPDVVTYNTLARAYAQDGETNKAESIIV--DMLNKKVNPNERTCGIIVGGYCEQGNLAE 286
Query: 507 AHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQ 566
A ++ M G+ + ++ SL+K +++ V L +G++ D + ++
Sbjct: 287 ALRVVYRMRDLGIHPNLVIFNSLIKGFLDIGDSDGVDKALTMMEESGVKPDVITFSTIMN 346
Query: 567 SKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEV-KEGQR 625
+F +M +S I H F +L KG + E LL + K G R
Sbjct: 347 GWSSAGRMDKCQEIFDDMLKSGIEPDIHV-FSILAKGFVRAGEPVKAESLLNFMSKYGVR 405
Query: 626 IDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGY--AAIGGKYT 683
+ + + +I +C M+ A K + M + PN +TF +++ GY A +
Sbjct: 406 PNVVI--FTTIISGWCTAGKMEKAWKVFEHMCDMDVSPNLKTFETLIWGYGEAKQPWRAE 463
Query: 684 EVTELWGEMKSFASSTSMNFDEELLDSV 711
E+ ++ EM ++++ E S+
Sbjct: 464 EILQMMEEMNVVPENSTLKLVSEAWRSI 491
>gi|414872431|tpg|DAA50988.1| TPA: hypothetical protein ZEAMMB73_390723 [Zea mays]
Length = 1627
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 77/340 (22%), Positives = 135/340 (39%), Gaps = 24/340 (7%)
Query: 444 HGILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGW 503
H +P Y +L++ +AG+ E HF + ++E + D + ++I G
Sbjct: 1283 HQYCRPDVFTYTELIRGLGKAGRIDEAYHFFCEMQREGCR--PDTVFMNNMINFLGKAGR 1340
Query: 504 LDQAHDLLDEMHLAGVRASSSVYASLLKAYIEA-NRPREVTALLRDARSAGIQLDASCYE 562
LD A L EM S Y +++KA E+ +R EV + + +GI + Y
Sbjct: 1341 LDDAMKLFQEMETLRCIPSVVTYNTIIKALFESKSRASEVPSWFERMKESGISPSSFTYS 1400
Query: 563 ALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKE 622
L+ A+ L +EM E P + L+ + L +L QE+KE
Sbjct: 1401 ILIDGFCKTNRMEKAMMLLEEMDEKGFPPC-PAAYCSLIDALGKAKRYDLACELFQELKE 1459
Query: 623 GQRIDCGVHD---WNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIG 679
+CG + +I K + DA M LG P+ ++++++G A
Sbjct: 1460 ----NCGSSSARVYAVMIKHLGKAGRLDDAINMFDEMNKLGCAPDVYAYNALMSGLART- 1514
Query: 680 GKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFID 739
G E M+ +N +L+ + T G RA E+++ M++ + D
Sbjct: 1515 GMLDEALSTMRRMQEHGCIPDINSYNIILNGLAKT----GGPHRAMEMLSNMKQSTVRPD 1570
Query: 740 KYKYRTLFLKY-HKTLYKGKTPKFQTEAQLKKREAALGFK 778
Y T+ H + F+ ++L K LGF+
Sbjct: 1571 VVSYNTVLGALSHAGM-------FEEASKLMKEMNTLGFE 1603
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 61/249 (24%), Positives = 106/249 (42%), Gaps = 18/249 (7%)
Query: 490 ALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSV-YASLLKAYIEANRPREVTALLRD 548
A +I + + G ++ H L +EM G +V Y++L+ A+ + R LL +
Sbjct: 1186 AYNSMIIMLMHEGQYEKVHQLYNEMSTEGHCFPDTVTYSALISAFCKLGRRDSAIQLLNE 1245
Query: 549 ARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNH 608
+ G+Q Y L+ D GAL LF+EM+ R + L++G +
Sbjct: 1246 MKEIGMQPTTKIYTMLIALFFKFNDAHGALSLFEEMRHQYC-RPDVFTYTELIRGLGK-- 1302
Query: 609 EAGLMAKLLQEVKEGQRIDCGVHD--WNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQ 666
AG + + E QR C NN+I+F K + DA K + M +L +P+
Sbjct: 1303 -AGRIDEAYHFFCEMQREGCRPDTVFMNNMINFLGKAGRLDDAMKLFQEMETLRCIPSVV 1361
Query: 667 TFHSMVTGYAAIGGKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFA--RA 724
T+++++ + +EV + MK S S S Y+ + GF R
Sbjct: 1362 TYNTIIKALFESKSRASEVPSWFERMKESGISPS---------SFTYSILIDGFCKTNRM 1412
Query: 725 NEVVAMMEE 733
+ + ++EE
Sbjct: 1413 EKAMMLLEE 1421
>gi|255585033|ref|XP_002533225.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223526957|gb|EEF29157.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 605
Score = 69.7 bits (169), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 71/318 (22%), Positives = 133/318 (41%), Gaps = 21/318 (6%)
Query: 437 VELITTEHGILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVIT 496
VE+ T IL I KL +A GK K + F D+ + ++
Sbjct: 44 VEVNTNTFNILICGCCIENKLSEAIGLIGKMKHFSCF------------PDNVSYNTILD 91
Query: 497 LCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQL 556
+ G L++A DLL +M G+ + + + L+ Y + +E ++ +
Sbjct: 92 VLCKKGKLNEARDLLLDMKNNGLFPNRNTFNILVSGYCKLGWLKEAAEVIDIMARNNVLP 151
Query: 557 DASCYEALLQSKIVQKDTPGALHLFKEMKESKI-PRSGHQEFEMLVKGCAQNHEAGLMAK 615
D Y L+ A L EM+ K+ P + ML+ GC + + +
Sbjct: 152 DVRTYTTLIGGLCKDGKIDEAFRLRDEMENLKLLPHV--VTYNMLINGCFECSSSLKGFE 209
Query: 616 LLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGY 675
L+ E+ EG+ + +N V+ ++ K+ M +A L++M G P+ TF+++ GY
Sbjct: 210 LIDEM-EGKGVKPNAVTYNVVVKWYVKEGKMDNAGNELRKMEESGFSPDCVTFNTLSNGY 268
Query: 676 AAIGGKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGK 735
G+ +E + EM S + + L+++L+T A ++++ +
Sbjct: 269 CK-AGRLSEAFRMMDEM----SRKGLKMNSVTLNTILHTLCGERKLDDAYKLLSSASKRG 323
Query: 736 MFIDKYKYRTLFLKYHKT 753
F+D+ Y TL + Y K
Sbjct: 324 YFVDEVSYGTLIMGYFKV 341
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 68/333 (20%), Positives = 121/333 (36%), Gaps = 71/333 (21%)
Query: 430 LGMLQKQVELIT--TEHGILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHD 487
LG L++ E+I + +L P + Y L+ + GK E F ++ E ENL++
Sbjct: 131 LGWLKEAAEVIDIMARNNVL-PDVRTYTTLIGGLCKDGKIDE--AFRLRDEMENLKLLPH 187
Query: 488 DAALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLR 547
+I C + +L+DEM GV+ ++ Y ++K Y++ + LR
Sbjct: 188 VVTYNMLINGCFECSSSLKGFELIDEMEGKGVKPNAVTYNVVVKWYVKEGKMDNAGNELR 247
Query: 548 DARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQN 607
+G D + L A + EM KG N
Sbjct: 248 KMEESGFSPDCVTFNTLSNGYCKAGRLSEAFRMMDEMSR---------------KGLKMN 292
Query: 608 HEAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQT 667
N ++H C +R + DA K L G+ + +
Sbjct: 293 SVT----------------------LNTILHTLCGERKLDDAYKLLSSASKRGYFVDEVS 330
Query: 668 FHSMVTGYAAIGGKYTEVTELWGEMKSFASSTSMNFDEELLDSVL-YTFVRGGF------ 720
+ +++ GY +G + W EMK ++E++ S++ Y + GG
Sbjct: 331 YGTLIMGYFKVGK-----SXXWDEMK----------EKEIIPSIITYGTMIGGLCRSGKT 375
Query: 721 ---FARANEVVAMMEEGKMFIDKYKYRTLFLKY 750
+ NE++ E + D+ Y T+ L Y
Sbjct: 376 DQSIDKCNELL----ESGLVPDQTTYNTIILGY 404
Score = 42.4 bits (98), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 62/297 (20%), Positives = 113/297 (38%), Gaps = 42/297 (14%)
Query: 71 YPTHPFSSMGGTILVQARDPAKLSAEIE-NAIN--------EHRYGDAWKLYEQHMQMDG 121
YP+ P + I D KL E+ N N E++ +A L +
Sbjct: 23 YPSKPSVYLSKAIF---SDVIKLGVEVNTNTFNILICGCCIENKLSEAIGLIGKMKHFSC 79
Query: 122 FPRKTLVNKILTSFVESLDSKWLEKAYGLVEQAFEEGKQILLEKEPLIYLSLGLSKCGLP 181
FP N IL + L +A L+ G + + L G K G
Sbjct: 80 FPDNVSYNTILDVLCKK---GKLNEARDLLLDMKNNG--LFPNRNTFNILVSGYCKLGWL 134
Query: 182 VPASTILRKLVATEQYPPVTAWSAILAHMSLTAPGAYLAAELILEIGYLFQDGRVDPRKK 241
A+ ++ + P V ++ + IG L +DG++D +
Sbjct: 135 KEAAEVIDIMARNNVLPDVRTYTTL--------------------IGGLCKDGKIDEAFR 174
Query: 242 CNAPLIAMK--PNTNTFNIALAGCLLFETTRKAEQLLDIMPRIGVKADSNLLIIMAHIYE 299
+ +K P+ T+N+ + GC ++ K +L+D M GVK ++ ++ Y
Sbjct: 175 LRDEMENLKLLPHVVTYNMLINGCFECSSSLKGFELIDEMEGKGVKPNAVTYNVVVKWYV 234
Query: 300 RNGRREELRKLQRHIDEAVNLSDIQFRQFYNCLLSCHLKFGDLNSASKMVLEMLQRA 356
+ G+ + R ++E+ D +N L + + K G L+ A +M+ EM ++
Sbjct: 235 KEGKMDNAGNELRKMEESGFSPDC---VTFNTLSNGYCKAGRLSEAFRMMDEMSRKG 288
>gi|297796945|ref|XP_002866357.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297312192|gb|EFH42616.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 907
Score = 69.7 bits (169), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 107/525 (20%), Positives = 198/525 (37%), Gaps = 82/525 (15%)
Query: 248 AMKPNTNTFNIALAGCLLFETTRKAEQLLDIMPRIGVKADSNLLIIMAHIYERNGRREE- 306
+ PN +N + +AE L D M +IG+ + I+ ++ R G+ +
Sbjct: 362 GVSPNIFVYNALIDSLCKGRNFDEAELLFDRMGKIGLCPNDVTYSILIDMFCRRGKLDTA 421
Query: 307 LRKLQRHIDEAVNLSDIQFRQFYNCLLSCHLKFGDLNSASKMVLEMLQRAKEARN-SLAA 365
L L ID + S YN L++ H KFGD+++A ++ EM+ + E + +
Sbjct: 422 LSFLGEMIDMGLKPSVYP----YNSLINGHCKFGDISAAESLMAEMINKKLEPTVVTYTS 477
Query: 366 AMLPFNAVGVNNRTPSEQNVNCTNSVDLENSGIIENHILSYEDFTKDRKFVALEAEVKRV 425
M + + G N+ + ++ GI+ + F L + + R
Sbjct: 478 LMGGYCSKGKINKALRLYH-------EMTGKGIVPSIY----------TFTTLLSGLFRA 520
Query: 426 LQTLLGMLQKQVELIT-TEHGILQPTEKIYIKLVKAFLEAGKTKELTHFLIKA-EKENLQ 483
G+++ V+L T ++P Y +++ + E G + FL + EK +
Sbjct: 521 -----GLIRDAVKLFTEMAEWNVKPNRVTYNVMIEGYCEEGNMSKAFEFLNEMIEKGIVP 575
Query: 484 VSHDDAALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVT 543
++ L H LC++ G +A +D +H + Y LL + + E
Sbjct: 576 DTYSYRPLIH--GLCLT-GQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEAL 632
Query: 544 ALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKI------------PR 591
++ +D G+ LD CY L+ + KD L L KEM + + +
Sbjct: 633 SVCQDMGLRGVDLDLVCYGVLIDGSLKHKDRKVFLGLLKEMHDRGLKPDDVIYTSMIDAK 692
Query: 592 SGHQEFE--------MLVKGCAQNHEAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKK 643
S +F+ M+ +GC N + VI+ CK
Sbjct: 693 SKTGDFKEAFGIWDLMINEGCVPNEVT----------------------YTAVINGLCKA 730
Query: 644 RLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGE-MKSFASSTSMN 702
+ +AE +MR +PN T+ + G + EL +K ++T+
Sbjct: 731 GFVNEAEILCSKMRPGNSVPNQVTYGCFLDILTKGVGDMKKAVELHNAILKGLLANTAT- 789
Query: 703 FDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFIDKYKYRTLF 747
+ ++ F R G A+E++ M + D Y T+
Sbjct: 790 -----YNMLIRGFCRQGRMEEASELITRMIGDGVSPDCITYTTMI 829
Score = 40.8 bits (94), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 55/249 (22%), Positives = 100/249 (40%), Gaps = 11/249 (4%)
Query: 447 LQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVI-TLCISLGWLD 505
P+E LV+ + GK +E + L+K E VS + +I +LC + D
Sbjct: 328 FSPSEAAVSSLVEGLRKRGKVEEALN-LVKRVAE-FGVSPNIFVYNALIDSLCKGRNF-D 384
Query: 506 QAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALL 565
+A L D M G+ + Y+ L+ + + + L + G++ Y +L+
Sbjct: 385 EAELLFDRMGKIGLCPNDVTYSILIDMFCRRGKLDTALSFLGEMIDMGLKPSVYPYNSLI 444
Query: 566 QSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKE--G 623
D A L EM K+ + ++ C++ G + K L+ E G
Sbjct: 445 NGHCKFGDISAAESLMAEMINKKLEPTVVTYTSLMGGYCSK----GKINKALRLYHEMTG 500
Query: 624 QRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYT 683
+ I ++ + ++ + L++DA K M PN T++ M+ GY G +
Sbjct: 501 KGIVPSIYTFTTLLSGLFRAGLIRDAVKLFTEMAEWNVKPNRVTYNVMIEGYCE-EGNMS 559
Query: 684 EVTELWGEM 692
+ E EM
Sbjct: 560 KAFEFLNEM 568
Score = 39.3 bits (90), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 43/201 (21%), Positives = 78/201 (38%), Gaps = 4/201 (1%)
Query: 492 GHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARS 551
G + +LC L L +A +++ +M G + Y L+ + + E + +D
Sbjct: 232 GVIRSLC-ELKDLSRAKEMIVQMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAG 290
Query: 552 AGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAG 611
++ D Y L+ ++ L + EM + S LV+G + +
Sbjct: 291 KELKPDVVTYCTLVCGLCKVQEFEVGLEMIDEMLRLRFSPS-EAAVSSLVEGLRKRGKVE 349
Query: 612 LMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSM 671
L++ V E + + +N +I CK R +AE RM +G PN T+ +
Sbjct: 350 EALNLVKRVAEFG-VSPNIFVYNALIDSLCKGRNFDEAELLFDRMGKIGLCPNDVTYSIL 408
Query: 672 VTGYAAIGGKYTEVTELWGEM 692
+ + GK GEM
Sbjct: 409 IDMFCR-RGKLDTALSFLGEM 428
>gi|326489757|dbj|BAK01859.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 746
Score = 69.3 bits (168), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 70/294 (23%), Positives = 124/294 (42%), Gaps = 18/294 (6%)
Query: 457 LVKAFLEAGKTKE-LTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQAHDLLDEMH 515
L+KA L AG+ K+ HF + + D G ++ G L+ A LLDEM
Sbjct: 261 LLKALLSAGRLKDACQHF------DEMSSPPDVVTYGTMVHGYCVRGELENAVKLLDEMA 314
Query: 516 LAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQKDTP 575
G+ ++++VY S++ + + +L D G+ LDA + ++ + D
Sbjct: 315 AKGLESNATVYTSVIALLCNKGQVSDALRVLEDMTMHGVALDAVVFTTVISGFCSKGDLA 374
Query: 576 GALHLFKEMKESKIP--RSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRIDCGVHDW 633
A LF+EM++ + R H L+ G + E ++LQE+ + + +D V +
Sbjct: 375 AARRLFEEMQKRGLAADRVTHTA---LINGLCRAGELKEADRVLQEMVD-KGLDVDVVTY 430
Query: 634 NNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEMK 693
+I +CK+ M +A + M PN T+ ++ G G EL EM
Sbjct: 431 TVLIDGYCKRGNMVEAFRVHNEMVGRRVAPNVVTYTALSDGLCK-QGDVRAANELLHEM- 488
Query: 694 SFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFIDKYKYRTLF 747
+ + + +S++ + G +A ++ ME D Y Y TL
Sbjct: 489 ---CNKGLELNVYTYNSLINGLCKFGNLEQAMRIMTEMEAAGHRTDVYTYTTLI 539
Score = 45.8 bits (107), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 79/170 (46%), Gaps = 9/170 (5%)
Query: 494 VITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAG 553
+ TLC S G D+AH++L EM G++ S + Y L+ + + R LL
Sbjct: 539 IDTLCKS-GEFDRAHNMLQEMLDKGIKPSIATYNVLMNGFCMSGRVEGGKKLLEWMLEKN 597
Query: 554 IQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKG-C-AQNHEAG 611
++ + Y +L++ + K+ ++K M ++ + +L+KG C A+N +
Sbjct: 598 VRPNVVTYNSLMKQYCIDKNMKSTTEIYKGMHSQEVA-PNENTYNILIKGHCKARNMKEA 656
Query: 612 LMAKLLQE-VKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLG 660
L QE +++G R+ ++ +I KK+ +A +MR+ G
Sbjct: 657 LY--FHQEMIEKGLRLTAS--SYSALIRLLNKKKKFSEARVFFDKMRNEG 702
Score = 39.7 bits (91), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 36/175 (20%), Positives = 78/175 (44%), Gaps = 2/175 (1%)
Query: 502 GWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCY 561
G + A++LL EM G+ + Y SL+ + + ++ + +AG + D Y
Sbjct: 476 GDVRAANELLHEMCNKGLELNVYTYNSLINGLCKFGNLEQAMRIMTEMEAAGHRTDVYTY 535
Query: 562 EALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVK 621
L+ + + A ++ +EM + I + + +L+ G + KLL+ +
Sbjct: 536 TTLIDTLCKSGEFDRAHNMLQEMLDKGI-KPSIATYNVLMNGFCMSGRVEGGKKLLEWML 594
Query: 622 EGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYA 676
E + + V +N+++ +C + M+ + K M S PN T++ ++ G+
Sbjct: 595 E-KNVRPNVVTYNSLMKQYCIDKNMKSTTEIYKGMHSQEVAPNENTYNILIKGHC 648
>gi|111154024|dbj|BAF02664.1| pentatricopeptide repeat protein [Physcomitrella patens]
gi|111185880|dbj|BAF02672.1| pentatricopeptide repeat protein [Physcomitrella patens]
Length = 531
Score = 69.3 bits (168), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 54/230 (23%), Positives = 108/230 (46%), Gaps = 7/230 (3%)
Query: 447 LQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVS-HDDAALGHVITLCISLGWLD 505
LQP Y LV A+ + G +E L + L V DD ++ G D
Sbjct: 246 LQPDAIAYTALVHAYAQEGLWEEAEKTL----SDMLDVGIVDDRPYAALVAAYGKAGLTD 301
Query: 506 QAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALL 565
+ +L+ M +GV AS+++Y +L+ + +A P + A+L+ ++ G Q D Y +++
Sbjct: 302 NVNKILETMKASGVEASTTLYNTLINIHSKAEAPEKARAVLQLMQADGCQCDEITYTSVM 361
Query: 566 QSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQR 625
++ K A + EMK + I + G + +L+ + G ++L+ ++ +
Sbjct: 362 EAYSRNKQPLMAESMMGEMKRAGI-QPGPVSYGVLISAYCRAGRLGDAERILRAMQNA-K 419
Query: 626 IDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGY 675
V +N +I + ++ AE+ + M+ G P+A TF+++++ Y
Sbjct: 420 CKPTVEIYNMMISGYASAKMRSQAERMFQTMQDCGLRPDAVTFNTLISMY 469
>gi|302761054|ref|XP_002963949.1| hypothetical protein SELMODRAFT_166434 [Selaginella moellendorffii]
gi|300167678|gb|EFJ34282.1| hypothetical protein SELMODRAFT_166434 [Selaginella moellendorffii]
Length = 1365
Score = 69.3 bits (168), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 70/302 (23%), Positives = 130/302 (43%), Gaps = 11/302 (3%)
Query: 447 LQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQ 506
LQP +++AF AGK KE++ F + + + +S + + G L++
Sbjct: 712 LQPNATCANYVLEAFGRAGKAKEISEFFQRLPE--MGISPNSRTFVVIFHAFSRNGNLEE 769
Query: 507 AHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQ 566
A + +M AG S V+ +LL Y + L++D + AG++LD Y ++
Sbjct: 770 ARSMYRQMKEAGFSPSIQVFKALLALYSRETVEIDAEELVKDIKKAGLELDIDIYNHMIS 829
Query: 567 SKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQE-VKEGQR 625
A +FK M+E F L+ ++N LL+E +K G
Sbjct: 830 LYSKLGSYRNAALVFKGMQEIGCSPDA-TTFNTLIMLYSRNQMVQEAQALLREMIKTGNA 888
Query: 626 IDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEV 685
+ + + +I + + + +DAE K + G P+A ++ M+ Y G++ ++
Sbjct: 889 PN--ISTYTTLISAYGRLQAYEDAELVFKSIAETGCKPDATAYNVMINVYRK-AGEHRKI 945
Query: 686 TELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFIDKYKYRT 745
E+ +MK S+ L+DS + +GG +A EV+ + E M D Y +
Sbjct: 946 EEIIEQMKVDGFEPSLTTIHMLMDS----YGKGGATGKAEEVLETLPEIGMSPDAIHYTS 1001
Query: 746 LF 747
+
Sbjct: 1002 II 1003
Score = 42.7 bits (99), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 55/240 (22%), Positives = 100/240 (41%), Gaps = 25/240 (10%)
Query: 502 GWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREV-TALLRDARSAGIQLDASC 560
G + LL M G R + ++KA + ++LL+D +AG++ D
Sbjct: 139 GDWNSVQQLLCRMQDRGCRPDLVTFNIVIKARTRGGMQEGLASSLLQDVYAAGLRPDTIT 198
Query: 561 YEALLQSKIVQKDTPGALHLFKEMKESKI-PRSGHQEFEMLVKGCAQNHEAGL-MAKLLQ 618
Y L+ + + A+ +F+EM+ P + V G A EA + +++Q
Sbjct: 199 YNTLISACSLNNRLSDAILIFEEMQRQGCDPDIWTYNAMISVYGRAGRVEAASSIFRIMQ 258
Query: 619 EVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAI 678
E Q +N+V+H F + +++ E+ MR + T+++M+ Y
Sbjct: 259 E----QGFTPDAVTYNSVLHAFARDGRIEEVERIRGMMRDARCSSDEITYNTMIHMYGK- 313
Query: 679 GGKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFV-----RGGFFARANEVVAMMEE 733
G + + EL+ +MK + DSV +T + + GF NE AM E+
Sbjct: 314 AGMHRKAEELYVQMKE---------EGRCPDSVTFTVLIDTLGKAGF---VNEAAAMFED 361
Score = 40.8 bits (94), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 52/228 (22%), Positives = 89/228 (39%), Gaps = 11/228 (4%)
Query: 527 ASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKE 586
A +L AN+P L A S+ I Y +L+ D L M++
Sbjct: 95 AVMLSVLGRANQPGLAQELFDRAESS-IGNCVQVYNSLMSVYARHGDWNSVQQLLCRMQD 153
Query: 587 SKIPRSGHQEFEMLVKGCAQN-HEAGLMAKLLQEV-KEGQRIDCGVHDWNNVIHFFCKKR 644
R F +++K + + GL + LLQ+V G R D +N +I
Sbjct: 154 RGC-RPDLVTFNIVIKARTRGGMQEGLASSLLQDVYAAGLRPD--TITYNTLISACSLNN 210
Query: 645 LMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEMKSFASSTSMNFD 704
+ DA + M+ G P+ T+++M++ Y G+ + ++ M+ D
Sbjct: 211 RLSDAILIFEEMQRQGCDPDIWTYNAMISVYGR-AGRVEAASSIFRIMQE----QGFTPD 265
Query: 705 EELLDSVLYTFVRGGFFARANEVVAMMEEGKMFIDKYKYRTLFLKYHK 752
+SVL+ F R G + MM + + D+ Y T+ Y K
Sbjct: 266 AVTYNSVLHAFARDGRIEEVERIRGMMRDARCSSDEITYNTMIHMYGK 313
Score = 39.3 bits (90), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 42/195 (21%), Positives = 87/195 (44%), Gaps = 39/195 (20%)
Query: 518 GVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQ----------- 566
G ++S Y++LL AY E T L + +AG+Q +A+C +L+
Sbjct: 676 GFAGNTSAYSALLSAYAETGNFERATRALDNMVAAGLQPNATCANYVLEAFGRAGKAKEI 735
Query: 567 SKIVQK------------------------DTPGALHLFKEMKESKIPRSGHQEFEMLVK 602
S+ Q+ + A ++++MKE+ S Q F+ L+
Sbjct: 736 SEFFQRLPEMGISPNSRTFVVIFHAFSRNGNLEEARSMYRQMKEAGFSPS-IQVFKALLA 794
Query: 603 GCAQNHEAGLMAKLLQEVKE-GQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGH 661
++ +L++++K+ G +D + +N++I + K ++A K M+ +G
Sbjct: 795 LYSRETVEIDAEELVKDIKKAGLELDIDI--YNHMISLYSKLGSYRNAALVFKGMQEIGC 852
Query: 662 LPNAQTFHSMVTGYA 676
P+A TF++++ Y+
Sbjct: 853 SPDATTFNTLIMLYS 867
>gi|297806221|ref|XP_002870994.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297316831|gb|EFH47253.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 819
Score = 69.3 bits (168), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 72/336 (21%), Positives = 133/336 (39%), Gaps = 39/336 (11%)
Query: 448 QPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQA 507
+PT Y ++ F + G L++ K + ++ D +IT C +A
Sbjct: 240 KPTLITYNVILNVFGKMGTPWNKITSLVEKMKSD-GIAPDAYTYNTLITCCKRGSLHQEA 298
Query: 508 HDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQS 567
+ +EM AG Y +LL Y +++RP+E +L + G Y +L+ +
Sbjct: 299 AQVFEEMKAAGFSHDKVTYNALLDVYGKSHRPKEAMKVLNEMELNGFSPSIVTYNSLISA 358
Query: 568 KIVQKDTPGALHLFKEMKE--------------SKIPRSGHQEF------EMLVKGCAQN 607
A+ L +M E S R+G E EM GC N
Sbjct: 359 YARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMNIFEEMRNAGCKPN 418
Query: 608 --------HEAGLMAKLLQEVKEGQRID-CGVH----DWNNVIHFFCKKRLMQDAEKALK 654
G K + +K I+ CG+ WN ++ F + + + K
Sbjct: 419 ICTFNAFIKMYGNRGKFVDMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFK 478
Query: 655 RMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYT 714
M+ G +P +TF+++++ Y+ G + + ++ M + D ++VL
Sbjct: 479 EMKRAGFVPERETFNTLISAYSRC-GSFEQAMTVYRRMLDAGVTP----DLSTYNTVLAA 533
Query: 715 FVRGGFFARANEVVAMMEEGKMFIDKYKYRTLFLKY 750
RGG + ++ +V+A ME+G+ ++ Y +L Y
Sbjct: 534 LARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAY 569
Score = 46.2 bits (108), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 95/495 (19%), Positives = 190/495 (38%), Gaps = 87/495 (17%)
Query: 248 AMKPNTNTFNIALAGCLLFETTRKAEQLLDIMPRIGVKADSNLLIIMAHIYERNGRREEL 307
+ P+ T+N + C ++A Q+ + M G D + +Y ++ R +E
Sbjct: 274 GIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSHDKVTYNALLDVYGKSHRPKEA 333
Query: 308 RKLQRHIDEAVNLSDIQFRQF------YNCLLSCHLKFGDLNSASKMVLEMLQRAKEARN 361
K+ L++++ F YN L+S + + G L+ A ++ +M ++ +
Sbjct: 334 MKV---------LNEMELNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDV 384
Query: 362 SLAAAMLP-FNAVGVNNRTPSEQNVNCTNSVDLENSGIIENHILSYEDFTK---DR-KFV 416
+L F G + S N+ ++ N+G N I ++ F K +R KFV
Sbjct: 385 FTYTTLLSGFERAG---KVESAMNI----FEEMRNAGCKPN-ICTFNAFIKMYGNRGKFV 436
Query: 417 ALEAEVKRV-----------LQTLLGMLQKQVELITTEHGILQ--------PTEKIYIKL 457
+ + TLL + Q + + G+ + P + + L
Sbjct: 437 DMMKIFDEINVCGLSPDIVTWNTLLAVF-GQNGMDSEVSGVFKEMKRAGFVPERETFNTL 495
Query: 458 VKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQAHDLLDEMHLA 517
+ A+ G ++ + + V+ D + V+ G +Q+ +L EM
Sbjct: 496 ISAYSRCGSFEQA--MTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDG 553
Query: 518 GVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQKDTPGA 577
+ + Y SLL AY + +L + S I+ A + L+ P A
Sbjct: 554 RCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEA 613
Query: 578 LHLFKEMKE-----------SKIPRSGHQE-----------------------FEMLVKG 603
F E+KE S + G ++ + L+
Sbjct: 614 ERAFSELKERGFSPDITTLNSMVSIYGRRQMVGKANEVLDYMKERGFTPSMATYNSLMYM 673
Query: 604 CAQNHEAGLMAKLLQEV-KEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHL 662
+++ + G ++L+E+ +G + D + +N VI+ +C+ M+DA + MR G +
Sbjct: 674 HSRSADFGKSEEILREILAKGIKPD--IISYNTVIYAYCRNTRMRDASRIFSEMRDSGIV 731
Query: 663 PNAQTFHSMVTGYAA 677
P+ T+++ + YAA
Sbjct: 732 PDVITYNTFIGSYAA 746
>gi|357130476|ref|XP_003566874.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
mitochondrial-like [Brachypodium distachyon]
Length = 810
Score = 69.3 bits (168), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 69/259 (26%), Positives = 110/259 (42%), Gaps = 22/259 (8%)
Query: 430 LGMLQKQVELI--TTEHGILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHD 487
+GM QK EL T G+L T ++ + L K L + K+ +
Sbjct: 345 VGMTQKAYELCRQMTGQGLLPSTFELSLVL-KGLLNDRRWKDAVCLFEEMA--------- 394
Query: 488 DAALGHVITLCISLGWLDQAH------DLLDEMHLAGVRASSSVYASLLKAYIEANRPRE 541
D+ L V T + W QAH +L D M AGV+ S + Y SLL Y + E
Sbjct: 395 DSGLPDVFTYNNLIHWHCQAHKLREALNLFDRMKKAGVKPSINTYNSLLMGYCKKGCMDE 454
Query: 542 VTALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLV 601
L + G + + Y L++ I +KD A L EMK++ + + + + +L+
Sbjct: 455 AVKLYSEMPMEGFKPNVVTYITLMRGYIAKKDFDNAYALLDEMKQNGVSCNDYT-YNVLI 513
Query: 602 KG-CAQNHEAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLG 660
G C + + L + EG + +N++I+ F K +M A ++MR G
Sbjct: 514 NGICMVDRVCEVDGMLKSFMSEG--FIPTMMTYNSIINGFVKAGMMGSAFTVYQQMREKG 571
Query: 661 HLPNAQTFHSMVTGYAAIG 679
PN T+ S + GY G
Sbjct: 572 LPPNIITYTSFIDGYCRTG 590
>gi|224134148|ref|XP_002321748.1| predicted protein [Populus trichocarpa]
gi|222868744|gb|EEF05875.1| predicted protein [Populus trichocarpa]
Length = 1041
Score = 68.9 bits (167), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 66/312 (21%), Positives = 131/312 (41%), Gaps = 44/312 (14%)
Query: 447 LQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQ 506
++P + Y +++ +L+ T + L + +K NL + G +I G ++
Sbjct: 407 IKPDTQTYNNMIEGYLKEQNTSRVKDLLSEMKKSNLVPTA--YTCGMIINGLCRHGSIED 464
Query: 507 AHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQ 566
A + + M GV+ ++ +Y +L+K +++ R +E +L+ G+Q D CY +++
Sbjct: 465 ASRVFEIMVSLGVKPNAVIYTTLIKGHVQEGRFQEAVRILKVMDKKGVQPDVLCYNSVII 524
Query: 567 SKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRI 626
L ++M+E+K EM+ +G N
Sbjct: 525 ----------GLCKSRKMEEAK-----DYLVEMIERGLKPN------------------- 550
Query: 627 DCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVT 686
V+ + +IH +CK MQ A++ K M G PN +++ GY G TE T
Sbjct: 551 ---VYTYGALIHGYCKSGEMQVADRYFKEMLGCGIAPNDVVCTALIDGYCK-EGSTTEAT 606
Query: 687 ELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFIDKYKYRTL 746
++ M S++ D ++++ +R G A E+++ E + D + Y ++
Sbjct: 607 SIFRCM----LGRSVHPDVRTYSALIHGLLRNGKLQGAMELLSEFLEKGLVPDVFTYNSI 662
Query: 747 FLKYHKTLYKGK 758
+ K GK
Sbjct: 663 ISGFCKQGGIGK 674
Score = 59.3 bits (142), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 91/466 (19%), Positives = 198/466 (42%), Gaps = 42/466 (9%)
Query: 251 PNTNTFNIALAGCLLFETTRKAEQLLDIMPRIGVKADSNLLIIMAHIYERNGRREELRKL 310
P T + + G + A ++ +IM +GVK ++ + + + + GR +E ++
Sbjct: 444 PTAYTCGMIINGLCRHGSIEDASRVFEIMVSLGVKPNAVIYTTLIKGHVQEGRFQEAVRI 503
Query: 311 QRHIDEAVNLSDIQFRQFYNCLLSCHLKFGDLNSASKMVLEMLQRAKEARNSLAAAML-- 368
+ +D+ D+ YN ++ K + A ++EM++R + A++
Sbjct: 504 LKVMDKKGVQPDVLC---YNSVIIGLCKSRKMEEAKDYLVEMIERGLKPNVYTYGALIHG 560
Query: 369 --PFNAVGVNNRTPSE--------QNVNCTNSVD-------LENSGIIENHILSYEDFTK 411
+ V +R E +V CT +D + I +L
Sbjct: 561 YCKSGEMQVADRYFKEMLGCGIAPNDVVCTALIDGYCKEGSTTEATSIFRCMLGRSVHPD 620
Query: 412 DRKFVALEAEVKRVLQTLLGMLQKQVELITT--EHGILQPTEKIYIKLVKAFLEAG---K 466
R + AL + +L+ G LQ +EL++ E G++ P Y ++ F + G K
Sbjct: 621 VRTYSAL---IHGLLRN--GKLQGAMELLSEFLEKGLV-PDVFTYNSIISGFCKQGGIGK 674
Query: 467 TKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVY 526
+L ++ + +S + +I G +++A +L D + G+ ++ Y
Sbjct: 675 AFQLHEYMCQK-----GISPNIITYNALINGLCKAGEIERARELFDGIPGKGLAHNAVTY 729
Query: 527 ASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKE 586
A+++ Y ++ + L + G+ D+ Y AL+ + +T AL LF E +
Sbjct: 730 ATIIDGYCKSGNLSKAFRLFDEMTLKGVPPDSFVYSALIDGCRKEGNTEKALSLFLESVQ 789
Query: 587 SKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLM 646
+ L+ G ++ + +LL+++ + + + + +I + CK +
Sbjct: 790 KGFAST--SSLNALMDGFCKSGKVIEANQLLEDMVD-KHVKPDHVTYTILIDYHCKTGFL 846
Query: 647 QDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEM 692
++AE+ M+ +PNA T+ ++++GY + G+ +E+ L+ EM
Sbjct: 847 KEAEQFFVDMQKRNLMPNALTYTALLSGY-NMAGRRSEMFALFDEM 891
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 87/211 (41%), Gaps = 3/211 (1%)
Query: 483 QVSHDDAALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREV 542
V HD H+I G + LL EM G S Y ++ A E
Sbjct: 231 NVLHDVYTYTHLINAHFRAGNAKEGKRLLFEMEEKGCSPSLVTYNVVIGGLCRAGEVDEA 290
Query: 543 TALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVK 602
L + G+ D Y L+ QK A + +EM SK + GH + L+
Sbjct: 291 FELKKLMDKKGLVADVFTYSILIDGFGKQKRCTEAKLMLEEM-FSKGLKPGHVAYTALID 349
Query: 603 GCAQNHEAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHL 662
G + ++G ++ +E+ + + + +N ++ CK M+ A+ L M +G
Sbjct: 350 GFMRQGDSGEAFRVKEEML-ARGVKLNLFTYNALVKGVCKFGDMEKADALLNEMIMVGIK 408
Query: 663 PNAQTFHSMVTGYAAIGGKYTEVTELWGEMK 693
P+ QT+++M+ GY + V +L EMK
Sbjct: 409 PDTQTYNNMIEGYLK-EQNTSRVKDLLSEMK 438
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 105/498 (21%), Positives = 189/498 (37%), Gaps = 78/498 (15%)
Query: 329 YNCLLSCHLKFGDLNSASKMVLEMLQ-----RAKEARNSLAAAMLPFNAVGVNNRTPSEQ 383
YN L+ KFGD+ A ++ EM+ + N + + N V + +
Sbjct: 379 YNALVKGVCKFGDMEKADALLNEMIMVGIKPDTQTYNNMIEGYLKEQNTSRVKDLLSEMK 438
Query: 384 NVNCTNSVDLENSGIIENHIL---SYEDFTKDRKF-VALEAEVKRVLQTLL-------GM 432
N + G+I N + S ED ++ + V+L + V+ T L G
Sbjct: 439 KSNLVPTA--YTCGMIINGLCRHGSIEDASRVFEIMVSLGVKPNAVIYTTLIKGHVQEGR 496
Query: 433 LQKQVEL--ITTEHGILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVS-HDDA 489
Q+ V + + + G+ QP Y ++ ++ K +E +L++ + L+ + +
Sbjct: 497 FQEAVRILKVMDKKGV-QPDVLCYNSVIIGLCKSRKMEEAKDYLVEMIERGLKPNVYTYG 555
Query: 490 ALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDA 549
AL H C S G + A EM G+ + V +L+ Y + E T++ R
Sbjct: 556 ALIH--GYCKS-GEMQVADRYFKEMLGCGIAPNDVVCTALIDGYCKEGSTTEATSIFRCM 612
Query: 550 RSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHE 609
+ D Y AL+ + GA+ L E E + ++ C Q
Sbjct: 613 LGRSVHPDVRTYSALIHGLLRNGKLQGAMELLSEFLEKGLVPDVFTYNSIISGFCKQ--- 669
Query: 610 AGLMAKLLQ--EVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQT 667
G + K Q E + I + +N +I+ CK ++ A + + G NA T
Sbjct: 670 -GGIGKAFQLHEYMCQKGISPNIITYNALINGLCKAGEIERARELFDGIPGKGLAHNAVT 728
Query: 668 FHSMVTGYAAIGGKYTEVTELWGEM----------------------------------- 692
+ +++ GY G ++ L+ EM
Sbjct: 729 YATIIDGYCK-SGNLSKAFRLFDEMTLKGVPPDSFVYSALIDGCRKEGNTEKALSLFLES 787
Query: 693 --KSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFIDKYKYRTLFLKY 750
K FAS++S+N L+D F + G AN+++ M + + D Y T+ + Y
Sbjct: 788 VQKGFASTSSLN---ALMDG----FCKSGKVIEANQLLEDMVDKHVKPDHVTY-TILIDY 839
Query: 751 H-KTLYKGKTPKFQTEAQ 767
H KT + + +F + Q
Sbjct: 840 HCKTGFLKEAEQFFVDMQ 857
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 95/227 (41%), Gaps = 40/227 (17%)
Query: 492 GHVITLCISLGWLDQ-----AHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALL 546
GHV + G++ Q A + +EM GV+ + Y +L+K + + ALL
Sbjct: 340 GHVAYTALIDGFMRQGDSGEAFRVKEEMLARGVKLNLFTYNALVKGVCKFGDMEKADALL 399
Query: 547 RDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESK-IP-------------RS 592
+ GI+ D Y +++ + +++T L EMK+S +P R
Sbjct: 400 NEMIMVGIKPDTQTYNNMIEGYLKEQNTSRVKDLLSEMKKSNLVPTAYTCGMIINGLCRH 459
Query: 593 GHQE-----FEM---------------LVKGCAQNHEAGLMAKLLQEVKEGQRIDCGVHD 632
G E FE+ L+KG Q ++L+ V + + + V
Sbjct: 460 GSIEDASRVFEIMVSLGVKPNAVIYTTLIKGHVQEGRFQEAVRILK-VMDKKGVQPDVLC 518
Query: 633 WNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIG 679
+N+VI CK R M++A+ L M G PN T+ +++ GY G
Sbjct: 519 YNSVIIGLCKSRKMEEAKDYLVEMIERGLKPNVYTYGALIHGYCKSG 565
>gi|225429339|ref|XP_002269471.1| PREDICTED: pentatricopeptide repeat-containing protein At5g02860
[Vitis vinifera]
Length = 811
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/245 (22%), Positives = 104/245 (42%), Gaps = 7/245 (2%)
Query: 506 QAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALL 565
+A ++L EM G S Y SL+ AY + L GI+ D Y LL
Sbjct: 324 EAMEVLQEMEGNGCPPSIVTYNSLISAYARDGLLEDALELKNQMVEKGIKPDVFTYTTLL 383
Query: 566 QSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQR 625
A+ +F+EM+ + F L+K + M K+ +++K Q
Sbjct: 384 SGFEKAGKDKAAVQIFEEMRNEGC-KPNICTFNALIKMHGNRGKFTEMMKVFEDIKTFQ- 441
Query: 626 IDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEV 685
+ WN ++ F + + + K M+ G +P TF+++++ Y+ G + +
Sbjct: 442 CSPDIVTWNTLLSVFGQNGMDSEVSGVFKEMKRAGFVPERDTFNTLISSYSRC-GSFDQA 500
Query: 686 TELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFIDKYKYRT 745
++ M +N D ++VL RGG + ++ +V+A M++G+ ++ Y +
Sbjct: 501 MAVYKRML----EAGVNPDLSSYNAVLAALARGGLWKQSEKVLAEMKDGRCKPNELTYCS 556
Query: 746 LFLKY 750
L Y
Sbjct: 557 LLHAY 561
Score = 65.9 bits (159), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 69/307 (22%), Positives = 135/307 (43%), Gaps = 24/307 (7%)
Query: 454 YIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCI----SLGWLDQAHD 509
Y ++ AF G+ +E K E +V + + + L + + W ++
Sbjct: 203 YTSMITAFTSNGRYREAVMVFKKME----EVGCKPTLITYNVILNVYGKMGMPW-NKMVG 257
Query: 510 LLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKI 569
L+D M AG+ S Y +L+ N E +L++ + AG D Y ALL
Sbjct: 258 LVDRMKSAGIAPDSYTYNTLISCCRRGNLYEEAAGVLKEMKLAGFSPDKVTYNALLDVYG 317
Query: 570 VQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLL----QEVKEGQR 625
+ + A+ + +EM+ + P S + L+ A++ GL+ L Q V++G +
Sbjct: 318 KSRRSKEAMEVLQEMEGNGCPPS-IVTYNSLISAYARD---GLLEDALELKNQMVEKGIK 373
Query: 626 IDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEV 685
D V + ++ F K + A + + MR+ G PN TF++++ + GK+TE+
Sbjct: 374 PD--VFTYTTLLSGFEKAGKDKAAVQIFEEMRNEGCKPNICTFNALIKMHGN-RGKFTEM 430
Query: 686 TELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFIDKYKYRT 745
+++ ++K+F S D +++L F + G + + V M+ ++ + T
Sbjct: 431 MKVFEDIKTFQCSP----DIVTWNTLLSVFGQNGMDSEVSGVFKEMKRAGFVPERDTFNT 486
Query: 746 LFLKYHK 752
L Y +
Sbjct: 487 LISSYSR 493
Score = 48.5 bits (114), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 66/333 (19%), Positives = 120/333 (36%), Gaps = 34/333 (10%)
Query: 448 QPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQA 507
+P + L+K GK E+ + + Q S D ++++ G +
Sbjct: 408 KPNICTFNALIKMHGNRGKFTEMMKVF--EDIKTFQCSPDIVTWNTLLSVFGQNGMDSEV 465
Query: 508 HDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQS 567
+ EM AG + +L+ +Y + A+ + AG+ D S Y A+L +
Sbjct: 466 SGVFKEMKRAGFVPERDTFNTLISSYSRCGSFDQAMAVYKRMLEAGVNPDLSSYNAVLAA 525
Query: 568 KIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRID 627
+ + EMK+ + + + L+ A E M L +E+ G I+
Sbjct: 526 LARGGLWKQSEKVLAEMKDGRC-KPNELTYCSLLHAYANGKEIERMCALAEEIYSGI-IE 583
Query: 628 CGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYA----------- 676
++ K L+ + E+A +R G P+ T ++MV+ Y
Sbjct: 584 PRAVLLKTLVLVNSKCDLLMETERAFLELRQRGFSPDITTLNAMVSIYGRRQMVAKANEI 643
Query: 677 ----AIGGKYTEVTELWGEMKSFASSTSMNFDEELL---------------DSVLYTFVR 717
GG +T M ++ S + EE+L ++V+Y + R
Sbjct: 644 LDCMKRGGFTPSLTTYNSLMYMYSRSANFERSEEILREILAKGIRPDIISYNTVIYAYCR 703
Query: 718 GGFFARANEVVAMMEEGKMFIDKYKYRTLFLKY 750
G A+ V++ M E D Y T Y
Sbjct: 704 NGRMRDASRVLSEMRESGPAPDIITYNTFIASY 736
Score = 43.1 bits (100), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 38/64 (59%), Gaps = 3/64 (4%)
Query: 615 KLLQEV-KEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVT 673
++L+E+ +G R D + +N VI+ +C+ M+DA + L MR G P+ T+++ +
Sbjct: 677 EILREILAKGIRPD--IISYNTVIYAYCRNGRMRDASRVLSEMRESGPAPDIITYNTFIA 734
Query: 674 GYAA 677
YAA
Sbjct: 735 SYAA 738
>gi|422294671|gb|EKU21971.1| hypothetical protein NGA_2006000, partial [Nannochloropsis gaditana
CCMP526]
Length = 472
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/248 (23%), Positives = 111/248 (44%), Gaps = 24/248 (9%)
Query: 447 LQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISL----- 501
L P + L+ AF+ ++A ++ + + L V+T L
Sbjct: 54 LSPDTYTFNTLIAAFV--------ARREVRAAEKMVAYMQEHGVLADVVTYSQLLQGYAT 105
Query: 502 --GWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDAS 559
G + +A ++L+ M GV +S Y L++ Y++A +L R+ G+ +
Sbjct: 106 KEGDMGKAEEVLERMARDGVAPNSYTYNYLIEGYVKAGEMDWAEDVLERMRTVGLAPTSM 165
Query: 560 CYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEA----GLMAK 615
Y L+ + ++D GA + MK+ + ++ Q F L+ A+ + G++A+
Sbjct: 166 NYCVLMDAYTRRRDARGAEKILDRMKKEGV-QANVQVFTTLMNAYAKRGDVEGAEGVLAR 224
Query: 616 LLQEVKE--GQRIDC--GVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSM 671
+L +E G DC VH ++ +++ + + L AE L RM + G PN TF ++
Sbjct: 225 MLAVAEEEGGGSKDCEPNVHTYSTLMNVYARAGLAAGAEGVLTRMTAAGWAPNVITFTTL 284
Query: 672 VTGYAAIG 679
+T Y+ G
Sbjct: 285 MTAYSRAG 292
Score = 40.8 bits (94), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 76/330 (23%), Positives = 134/330 (40%), Gaps = 37/330 (11%)
Query: 249 MKPNTNTFNIALAGCLLFETTRKAEQLLDIMPRIGVKADSNLL--IIMAHIYERNGRREE 306
+KPN T+N L A+Q+L M + G+ D+ +I A + R R E
Sbjct: 19 LKPNAITYNSLLTAYTNAGDMAGAQQVLKRMVQAGLSPDTYTFNTLIAAFVARREVRAAE 78
Query: 307 LRKLQRHIDEAVNLSDIQFRQFYNCLLSCH-LKFGDLNSASKMVLEMLQRAKEARNSLAA 365
K+ ++ E L+D+ Y+ LL + K GD+ A + VLE + R A NS
Sbjct: 79 --KMVAYMQEHGVLADV---VTYSQLLQGYATKEGDMGKAEE-VLERMARDGVAPNSYTY 132
Query: 366 AMLPFNAVGVNNRTPSEQNVNCTNSVDLENSGIIENHILSYEDFTKDRKFVALEAEVKRV 425
L V +E + +V L + + N+ + + +T+ R R
Sbjct: 133 NYLIEGYVKAGEMDWAEDVLERMRTVGLAPTSM--NYCVLMDAYTRRRD--------ARG 182
Query: 426 LQTLLGMLQKQVELITTEHGILQPTEKIYIKLVKAFLEAGKTKE----LTHFLIKAEKEN 481
+ +L ++K+ G+ Q +++ L+ A+ + G + L L AE+E
Sbjct: 183 AEKILDRMKKE--------GV-QANVQVFTTLMNAYAKRGDVEGAEGVLARMLAVAEEEG 233
Query: 482 LQVSHDDAALGHVITLCISL----GWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEAN 537
S D H + +++ G A +L M AG + + +L+ AY A
Sbjct: 234 -GGSKDCEPNVHTYSTLMNVYARAGLAAGAEGVLTRMTAAGWAPNVITFTTLMTAYSRAG 292
Query: 538 RPREVTALLRDARSAGIQLDASCYEALLQS 567
P +L+ +AG+ + Y LL +
Sbjct: 293 DPEGAELVLKRMEAAGVSPNVLTYNTLLSA 322
Score = 40.0 bits (92), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 69/155 (44%), Gaps = 9/155 (5%)
Query: 525 VYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEM 584
Y SLL AY A +L+ AG+ D + L+ + + +++ A + M
Sbjct: 25 TYNSLLTAYTNAGDMAGAQQVLKRMVQAGLSPDTYTFNTLIAAFVARREVRAAEKMVAYM 84
Query: 585 KESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRIDCGV----HDWNNVIHFF 640
+E + + + L++G A G M K +EV E D GV + +N +I +
Sbjct: 85 QEHGVL-ADVVTYSQLLQGYATKE--GDMGK-AEEVLERMARD-GVAPNSYTYNYLIEGY 139
Query: 641 CKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGY 675
K M AE L+RMR++G P + + ++ Y
Sbjct: 140 VKAGEMDWAEDVLERMRTVGLAPTSMNYCVLMDAY 174
>gi|356518050|ref|XP_003527697.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g11690-like [Glycine max]
Length = 556
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/290 (22%), Positives = 125/290 (43%), Gaps = 9/290 (3%)
Query: 457 LVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQAHDLLDEMHL 516
++K EAG + F + A E +S + +I C G + A +L +M
Sbjct: 164 MIKGCCEAGYF--VKGFRLLAMLEEFGLSPNVVIYTTLIDGCCKYGNVMLAKNLFCKMDR 221
Query: 517 AGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQKDTPG 576
G+ + Y+ L+ + + RE + + + +GI +A Y L+
Sbjct: 222 LGLVPNPHTYSVLMNGFFKQGLQREGFQMYENMKRSGIVPNAYAYNCLISEYCNGGMVDK 281
Query: 577 ALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRIDCGVHDWNNV 636
A +F EM+E I G + +L+ G + + G KL+ +V + + + +N +
Sbjct: 282 AFKVFAEMREKGIA-CGVMTYNILIGGLCRGKKFGEAVKLVHKVNK-VGLSPNIVTYNIL 339
Query: 637 IHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEMKSFA 696
I+ FC M A + +++S G P T+++++ GY+ + +L EM+
Sbjct: 340 INGFCDVGKMDTAVRLFNQLKSSGLSPTLVTYNTLIAGYSKVE-NLAGALDLVKEMEERC 398
Query: 697 SSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFIDKYKYRTL 746
+ S L+D+ F R + +A E+ ++ME+ + D Y Y L
Sbjct: 399 IAPSKVTYTILIDA----FARLNYTEKACEMHSLMEKSGLVPDVYTYSVL 444
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 81/180 (45%), Gaps = 8/180 (4%)
Query: 506 QAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALL 565
+A L+ +++ G+ + Y L+ + + + L +S+G+ Y L+
Sbjct: 316 EAVKLVHKVNKVGLSPNIVTYNILINGFCDVGKMDTAVRLFNQLKSSGLSPTLVTYNTLI 375
Query: 566 QSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQ---NHEAGLMAKLLQEVKE 622
++ GAL L KEM+E I S + +L+ A+ +A M L++ K
Sbjct: 376 AGYSKVENLAGALDLVKEMEERCIAPS-KVTYTILIDAFARLNYTEKACEMHSLME--KS 432
Query: 623 GQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKY 682
G D V+ ++ +IH C M++A K K + + PN+ +++M+ GY G Y
Sbjct: 433 GLVPD--VYTYSVLIHGLCVHGNMKEASKLFKSLGEMHLQPNSVIYNTMIHGYCKEGSSY 490
Score = 40.0 bits (92), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 84/452 (18%), Positives = 150/452 (33%), Gaps = 112/452 (24%)
Query: 248 AMKPNTNTFNIALAGCLLFETTRKAEQLLDIMPRIGVKADSNLLIIMAHIYERNGRREEL 307
+ PN + + GC + A+ L M R+G+ + + ++ + + + G + E
Sbjct: 188 GLSPNVVIYTTLIDGCCKYGNVMLAKNLFCKMDRLGLVPNPHTYSVLMNGFFKQGLQREG 247
Query: 308 RKLQRHIDEAVNLSDIQFRQFYNCLLSCHLKFGDLNSASKMVLEMLQRAKEARNSLAAAM 367
++ ++ + + YNCL+S + G ++ A K+ EM
Sbjct: 248 FQMYENMKRS---GIVPNAYAYNCLISEYCNGGMVDKAFKVFAEM--------------- 289
Query: 368 LPFNAVGVNNRTPSEQNVNCTNSVDLENSGIIENHILSYEDFTKDRKF---VALEAEVKR 424
E+ + C G++ +IL + +KF V L +V +
Sbjct: 290 -------------REKGIAC---------GVMTYNIL-IGGLCRGKKFGEAVKLVHKVNK 326
Query: 425 VLQTLLGMLQKQVELITTEHGILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQ- 483
V L P Y L+ F + GK + + L
Sbjct: 327 V--------------------GLSPNIVTYNILINGFCDVGKMDTAVRLFNQLKSSGLSP 366
Query: 484 --VSHDDAALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPRE 541
V+++ G+ + L A DL+ EM + S Y L+ A+ N +
Sbjct: 367 TLVTYNTLIAGYS-----KVENLAGALDLVKEMEERCIAPSKVTYTILIDAFARLNYTEK 421
Query: 542 VTALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKI-PRSGHQEFEML 600
+ +G+ D Y L+ V + A LFK + E + P S
Sbjct: 422 ACEMHSLMEKSGLVPDVYTYSVLIHGLCVHGNMKEASKLFKSLGEMHLQPNSV------- 474
Query: 601 VKGCAQNHEAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLG 660
+N +IH +CK+ A + L M G
Sbjct: 475 -------------------------------IYNTMIHGYCKEGSSYRALRLLNEMVHSG 503
Query: 661 HLPNAQTFHSMVTGYAAIGGKYTEVTELWGEM 692
+PN +F S + G K+ E L G+M
Sbjct: 504 MVPNVASFCSTI-GLLCRDEKWKEAELLLGQM 534
>gi|414872432|tpg|DAA50989.1| TPA: hypothetical protein ZEAMMB73_390723 [Zea mays]
Length = 604
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 66/323 (20%), Positives = 127/323 (39%), Gaps = 43/323 (13%)
Query: 444 HGILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGW 503
H +P Y +L++ +AG+ E HF + ++E + D + ++I G
Sbjct: 260 HQYCRPDVFTYTELIRGLGKAGRIDEAYHFFCEMQREGCR--PDTVFMNNMINFLGKAGR 317
Query: 504 LDQAHDLLDEMHLAGVRASSSVYASLLKAYIEA-NRPREVTALLRDARSAGIQLDASCYE 562
LD A L EM S Y +++KA E+ +R EV + + +GI + Y
Sbjct: 318 LDDAMKLFQEMETLRCIPSVVTYNTIIKALFESKSRASEVPSWFERMKESGISPSSFTYS 377
Query: 563 ALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKE 622
L+ A+ L +EM E P + L+ + L +L QE+KE
Sbjct: 378 ILIDGFCKTNRMEKAMMLLEEMDEKGFPPCP-AAYCSLIDALGKAKRYDLACELFQELKE 436
Query: 623 G--------------------------------QRIDCG--VHDWNNVIHFFCKKRLMQD 648
++ C V+ +N ++ + ++ +
Sbjct: 437 NCGSSSARVYAVMIKHLGKAGRLDDAINMFDEMNKLGCAPDVYAYNALMSGLARTGMLDE 496
Query: 649 AEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEMKSFASSTSMNFDEELL 708
A ++RM+ G +P+ +++ ++ G A GG + + EM S +++ D
Sbjct: 497 ALSTMRRMQEHGCIPDINSYNIILNGLAKTGGPHRAM-----EMLSNMKQSTVRPDVVSY 551
Query: 709 DSVLYTFVRGGFFARANEVVAMM 731
++VL G F A++++ M
Sbjct: 552 NTVLGALSHAGMFEEASKLMKEM 574
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 61/249 (24%), Positives = 107/249 (42%), Gaps = 18/249 (7%)
Query: 490 ALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSV-YASLLKAYIEANRPREVTALLRD 548
A +I + + G ++ H L +EM G +V Y++L+ A+ + R LL +
Sbjct: 163 AYNSMIIMLMHEGQYEKVHQLYNEMSTEGHCFPDTVTYSALISAFCKLGRRDSAIQLLNE 222
Query: 549 ARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNH 608
+ G+Q Y L+ D GAL LF+EM+ + R + L++G +
Sbjct: 223 MKEIGMQPTTKIYTMLIALFFKFNDAHGALSLFEEMRH-QYCRPDVFTYTELIRGLGK-- 279
Query: 609 EAGLMAKLLQEVKEGQRIDCGVHD--WNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQ 666
AG + + E QR C NN+I+F K + DA K + M +L +P+
Sbjct: 280 -AGRIDEAYHFFCEMQREGCRPDTVFMNNMINFLGKAGRLDDAMKLFQEMETLRCIPSVV 338
Query: 667 TFHSMVTGYAAIGGKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFA--RA 724
T+++++ + +EV + MK S S S Y+ + GF R
Sbjct: 339 TYNTIIKALFESKSRASEVPSWFERMKESGISPS---------SFTYSILIDGFCKTNRM 389
Query: 725 NEVVAMMEE 733
+ + ++EE
Sbjct: 390 EKAMMLLEE 398
Score = 40.8 bits (94), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 50/243 (20%), Positives = 98/243 (40%), Gaps = 7/243 (2%)
Query: 443 EHGILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLG 502
E GI P+ Y L+ F + + ++ L + +++ AA +I
Sbjct: 366 ESGI-SPSSFTYSILIDGFCKTNRMEKAMMLLEEMDEKGFPPC--PAAYCSLIDALGKAK 422
Query: 503 WLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYE 562
D A +L E+ +S+ VYA ++K +A R + + + G D Y
Sbjct: 423 RYDLACELFQELKENCGSSSARVYAVMIKHLGKAGRLDDAINMFDEMNKLGCAPDVYAYN 482
Query: 563 ALLQSKIVQKDTPGALHLFKEMKESK-IPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVK 621
AL+ AL + M+E IP + +++ G A+ ++L +K
Sbjct: 483 ALMSGLARTGMLDEALSTMRRMQEHGCIPDI--NSYNIILNGLAKTGGPHRAMEMLSNMK 540
Query: 622 EGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGK 681
+ + V +N V+ + ++A K +K M +LG + T+ S++ + +
Sbjct: 541 QST-VRPDVVSYNTVLGALSHAGMFEEASKLMKEMNTLGFEYDLITYSSILEAIGKVDHE 599
Query: 682 YTE 684
YT+
Sbjct: 600 YTD 602
>gi|356574297|ref|XP_003555285.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g02860-like [Glycine max]
Length = 794
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/290 (21%), Positives = 120/290 (41%), Gaps = 38/290 (13%)
Query: 494 VITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAG 553
+I+ C + ++A DL +E+ +AG R + Y +LL Y ++ RP+E +L+ S
Sbjct: 256 LISCCRAGSLYEEALDLFEEIKVAGFRPDAVTYNALLDVYGKSRRPKEAMEVLKQMESNS 315
Query: 554 IQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIP--------------RSGHQEF-- 597
+ Y +L+ + + AL L ++M + I +G +E
Sbjct: 316 FRPSVVTYNSLVSAYVRGGLLEDALVLKRKMVDKGIKPDVYTYTTLLSGFVNAGKEELAM 375
Query: 598 ----EMLVKGCAQN-----------HEAGLMAKLLQEVKEGQRIDCG--VHDWNNVIHFF 640
EM GC N + G ++++ KE + C + WN ++ F
Sbjct: 376 EVFEEMRKVGCKPNICTFNALIKMYGDRGKFEEMVKVFKEIKVCKCSPDIVTWNTLLAVF 435
Query: 641 CKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEMKSFASSTS 700
+ + + + M+ P TF+++++ Y G + + + M S
Sbjct: 436 GQNGMDSEVSGVFEEMKRSRFAPERDTFNTLISAYGRCGS-FDQAMAAYKRMLEAGVSP- 493
Query: 701 MNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFIDKYKYRTLFLKY 750
D ++VL T RGG + ++ +V+A M++G ++ Y +L Y
Sbjct: 494 ---DLSTYNAVLATLARGGLWEQSEKVLAEMKDGGCKPNEVTYSSLLHAY 540
Score = 48.1 bits (113), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 54/245 (22%), Positives = 103/245 (42%), Gaps = 11/245 (4%)
Query: 510 LLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKI 569
L+ +M G+ Y +L+ + E L + + AG + DA Y ALL
Sbjct: 237 LVQDMKCHGLAPDLCTYNTLISCCRAGSLYEEALDLFEEIKVAGFRPDAVTYNALLDVYG 296
Query: 570 VQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLM--AKLLQEVKEGQRID 627
+ A+ + K+M ES R + LV + GL+ A +L+ + I
Sbjct: 297 KSRRPKEAMEVLKQM-ESNSFRPSVVTYNSLVSAYVR---GGLLEDALVLKRKMVDKGIK 352
Query: 628 CGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTE 687
V+ + ++ F + A + + MR +G PN TF++++ Y GK+ E+ +
Sbjct: 353 PDVYTYTTLLSGFVNAGKEELAMEVFEEMRKVGCKPNICTFNALIKMYGD-RGKFEEMVK 411
Query: 688 LWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFIDKYKYRTLF 747
++ E+K S D +++L F + G + + V M+ + ++ + TL
Sbjct: 412 VFKEIKVCKCSP----DIVTWNTLLAVFGQNGMDSEVSGVFEEMKRSRFAPERDTFNTLI 467
Query: 748 LKYHK 752
Y +
Sbjct: 468 SAYGR 472
Score = 47.8 bits (112), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 47/229 (20%), Positives = 90/229 (39%), Gaps = 37/229 (16%)
Query: 484 VSHDDAALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVT 543
VS D + V+ G +Q+ +L EM G + + Y+SLL AY +
Sbjct: 491 VSPDLSTYNAVLATLARGGLWEQSEKVLAEMKDGGCKPNEVTYSSLLHAYANGREVERMN 550
Query: 544 ALLRDA-----------------------------------RSAGIQLDASCYEALLQSK 568
AL + R GI D + A+L
Sbjct: 551 ALAEEIYSGTIKTHAVLLKTLVLVNSKVDLLVETERAFLEFRKRGISPDVTTSNAMLSIY 610
Query: 569 IVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRIDC 628
+K P A + M ES + S + L+ ++ ++ +E+ + + I+
Sbjct: 611 GRKKMVPKANEILNFMYESGLTLS-LTSYNSLMYMYSRTENFHKSEQIFREILD-KGIEP 668
Query: 629 GVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAA 677
V +N VI+ +C+ +M +A++ ++ M+ +P+ T+++ + YAA
Sbjct: 669 DVISYNIVIYAYCRNDMMDEAKRIIEEMKVPAPVPDVVTYNTFIAAYAA 717
Score = 46.2 bits (108), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 68/346 (19%), Positives = 138/346 (39%), Gaps = 44/346 (12%)
Query: 443 EHGILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLG 502
E +P+ Y LV A++ G ++ ++K + + + D +++ ++ G
Sbjct: 312 ESNSFRPSVVTYNSLVSAYVRGGLLED--ALVLKRKMVDKGIKPDVYTYTTLLSGFVNAG 369
Query: 503 WLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYE 562
+ A ++ +EM G + + + +L+K Y + + E+ + ++ + D +
Sbjct: 370 KEELAMEVFEEMRKVGCKPNICTFNALIKMYGDRGKFEEMVKVFKEIKVCKCSPDIVTWN 429
Query: 563 ALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKG---CAQNHEAGLMAKLLQE 619
LL +F+EMK S+ F L+ C +A MA +
Sbjct: 430 TLLAVFGQNGMDSEVSGVFEEMKRSRFAPE-RDTFNTLISAYGRCGSFDQA--MAAYKRM 486
Query: 620 VKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIG 679
++ G D + +N V+ + L + +EK L M+ G PN T+ S++ YA
Sbjct: 487 LEAGVSPD--LSTYNAVLATLARGGLWEQSEKVLAEMKDGGCKPNEVTYSSLLHAYA--N 542
Query: 680 GKYTE-----VTELW-GEMKSFA----SSTSMNFDEELL--------------------- 708
G+ E E++ G +K+ A + +N +LL
Sbjct: 543 GREVERMNALAEEIYSGTIKTHAVLLKTLVLVNSKVDLLVETERAFLEFRKRGISPDVTT 602
Query: 709 -DSVLYTFVRGGFFARANEVVAMMEEGKMFIDKYKYRTLFLKYHKT 753
+++L + R +ANE++ M E + + Y +L Y +T
Sbjct: 603 SNAMLSIYGRKKMVPKANEILNFMYESGLTLSLTSYNSLMYMYSRT 648
Score = 41.6 bits (96), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 46/195 (23%), Positives = 81/195 (41%), Gaps = 11/195 (5%)
Query: 492 GHVITLCISL----GWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLR 547
G VI + +S+ G + +A LL + G Y SL+ AY + R+ +
Sbjct: 144 GSVIAVIVSILGKTGRVSRAASLLHNLEADGFEVDVYGYTSLITAYANNKKYRDALKVFG 203
Query: 548 DARSAGIQLDASCYEALLQSKIVQKDTPGA--LHLFKEMKESKIPRSGHQEFEMLVKGCA 605
+ G + Y A+L + P A + L ++MK + + L+ C
Sbjct: 204 KMKEVGCEPTLITYNAILNV-YGKMGMPWAKIIALVQDMKCHGLA-PDLCTYNTLISCCR 261
Query: 606 QNHEAGLMAKLLQEVK-EGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPN 664
L +E+K G R D +N ++ + K R ++A + LK+M S P+
Sbjct: 262 AGSLYEEALDLFEEIKVAGFRPDAVT--YNALLDVYGKSRRPKEAMEVLKQMESNSFRPS 319
Query: 665 AQTFHSMVTGYAAIG 679
T++S+V+ Y G
Sbjct: 320 VVTYNSLVSAYVRGG 334
>gi|168063537|ref|XP_001783727.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162664733|gb|EDQ51441.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 445
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/222 (22%), Positives = 102/222 (45%), Gaps = 4/222 (1%)
Query: 454 YIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQAHDLLDE 513
Y L + F + GK + + + E +N+ + ++ G VI I+ G +D++ L++
Sbjct: 169 YNTLAQLFAKLGKPWDAENVI--TEMQNVYLRPNERTYGIVINGYIAAGQIDESLRLIER 226
Query: 514 MHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQKD 573
M + G+ + +V+ L+K Y E+ +P +V + + + G++ D + ++ +
Sbjct: 227 MKMDGISPTIAVFNHLVKGYSESMKPHKVDKVFKLMENFGVKPDVQTFGLIMNAWCSTGL 286
Query: 574 TPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRIDCGVHDW 633
A + MKE + + + +LVKG ++ L + + + V +
Sbjct: 287 IDEAKAVLLRMKEYDL-QPDVMAYSILVKGYSRQGRPEEGEAFLN-IMIDENLKPNVITY 344
Query: 634 NNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGY 675
VI +C M DA + + MRS PN QTF +++ G+
Sbjct: 345 TTVISGYCSLAQMDDAMRVFQEMRSRSVFPNMQTFRTLIWGF 386
Score = 63.2 bits (152), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 45/186 (24%), Positives = 83/186 (44%), Gaps = 1/186 (0%)
Query: 494 VITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAG 553
+++ IS G L + LL +M V + + +LL Y EA + +E AL+ + + G
Sbjct: 31 LLSSLISDGRLGEGPLLLQQMEEDNVIPDAIFFNTLLNGYCEAGKMKEAEALVLEMKERG 90
Query: 554 IQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLM 613
L S Y L++ + A+ L +EM + + + F ML+K A +
Sbjct: 91 CPLITSSYNTLIKGYGLDGQPEEAMKLLQEMAKDVNSKPNDRTFNMLIKAWAHDKNPEKA 150
Query: 614 AKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVT 673
++ ++ + V +N + F K DAE + M+++ PN +T+ ++
Sbjct: 151 RNVISMMRAAG-VGPDVVSYNTLAQLFAKLGKPWDAENVITEMQNVYLRPNERTYGIVIN 209
Query: 674 GYAAIG 679
GY A G
Sbjct: 210 GYIAAG 215
Score = 47.4 bits (111), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 69/324 (21%), Positives = 127/324 (39%), Gaps = 47/324 (14%)
Query: 250 KPNTNTFNIALAGCLLFETTRKAEQLLDIMPRIGVKADSNLLIIMAHIYERNGRREELRK 309
KPN TFN+ + + KA ++ +M GV D +A ++ + G+ +
Sbjct: 128 KPNDRTFNMLIKAWAHDKNPEKARNVISMMRAAGVGPDVVSYNTLAQLFAKLGKPWDAEN 187
Query: 310 LQRHIDEAVNLSDIQFRQFYNCLLSCHLKFGDLNSASKMVLEMLQRAKEARNSLAAAMLP 369
+ I E N+ + Y +++ ++ G ++ + L +++R K + ++ +
Sbjct: 188 V---ITEMQNVYLRPNERTYGIVINGYIAAGQIDES----LRLIERMK--MDGISPTIAV 238
Query: 370 FNAVGVNNRTPSEQNVNCTNSVDLENSGIIENHILSYEDFTKDRKFVALEA-EVKRVLQT 428
FN +++ + S + D+ F +E VK +QT
Sbjct: 239 FNH-------------------------LVKGYSESMKPHKVDKVFKLMENFGVKPDVQT 273
Query: 429 L---------LGML-QKQVELITTEHGILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAE 478
G++ + + L+ + LQP Y LVK + G+ +E FL
Sbjct: 274 FGLIMNAWCSTGLIDEAKAVLLRMKEYDLQPDVMAYSILVKGYSRQGRPEEGEAFLNIMI 333
Query: 479 KENLQVSHDDAALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANR 538
ENL+ + VI+ SL +D A + EM V + + +L+ + EA
Sbjct: 334 DENLKPNV--ITYTTVISGYCSLAQMDDAMRVFQEMRSRSVFPNMQTFRTLIWGFKEARW 391
Query: 539 PREVTALLRDARSAGIQLDASCYE 562
PR +L R AG D C E
Sbjct: 392 PRRAEEILEYIRKAGFTPDLECIE 415
Score = 46.6 bits (109), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 61/308 (19%), Positives = 130/308 (42%), Gaps = 20/308 (6%)
Query: 454 YIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQAHDLLDE 513
Y L+K + G+ +E L + K+ + +D +I ++A +++
Sbjct: 98 YNTLIKGYGLDGQPEEAMKLLQEMAKD-VNSKPNDRTFNMLIKAWAHDKNPEKARNVISM 156
Query: 514 MHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQKD 573
M AGV Y +L + + + +P + ++ + ++ ++ + Y ++ I
Sbjct: 157 MRAAGVGPDVVSYNTLAQLFAKLGKPWDAENVITEMQNVYLRPNERTYGIVINGYIAAGQ 216
Query: 574 TPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRIDCGVHDW 633
+L L + MK I + F LVKG +++ + + K+ + + E + V +
Sbjct: 217 IDESLRLIERMKMDGISPT-IAVFNHLVKGYSESMKPHKVDKVFK-LMENFGVKPDVQTF 274
Query: 634 NNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEMK 693
+++ +C L+ +A+ L RM+ P+ + +V GY+ G E +
Sbjct: 275 GLIMNAWCSTGLIDEAKAVLLRMKEYDLQPDVMAYSILVKGYSRQGRPE--------EGE 326
Query: 694 SFASSTSMNFDEELLDSVL-YTFVRGGFFARANEVVAM-----MEEGKMFIDKYKYRTLF 747
+F ++ DE L +V+ YT V G+ + A AM M +F + +RTL
Sbjct: 327 AF---LNIMIDENLKPNVITYTTVISGYCSLAQMDDAMRVFQEMRSRSVFPNMQTFRTLI 383
Query: 748 LKYHKTLY 755
+ + +
Sbjct: 384 WGFKEARW 391
Score = 45.4 bits (106), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 65/159 (40%), Gaps = 7/159 (4%)
Query: 447 LQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEK--ENLQVSHDDAALGHVITLCISLGWL 504
+ PT ++ LVK + E+ K H + K K EN V D G ++ S G +
Sbjct: 232 ISPTIAVFNHLVKGYSESMKP----HKVDKVFKLMENFGVKPDVQTFGLIMNAWCSTGLI 287
Query: 505 DQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEAL 564
D+A +L M ++ Y+ L+K Y RP E A L ++ + Y +
Sbjct: 288 DEAKAVLLRMKEYDLQPDVMAYSILVKGYSRQGRPEEGEAFLNIMIDENLKPNVITYTTV 347
Query: 565 LQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKG 603
+ A+ +F+EM+ + Q F L+ G
Sbjct: 348 ISGYCSLAQMDDAMRVFQEMRSRSV-FPNMQTFRTLIWG 385
>gi|302769103|ref|XP_002967971.1| hypothetical protein SELMODRAFT_145138 [Selaginella moellendorffii]
gi|300164709|gb|EFJ31318.1| hypothetical protein SELMODRAFT_145138 [Selaginella moellendorffii]
Length = 1354
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 70/302 (23%), Positives = 131/302 (43%), Gaps = 11/302 (3%)
Query: 447 LQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQ 506
LQP +++AF AGK KEL+ F + + + ++ + + G L++
Sbjct: 701 LQPNAACANYVLEAFGRAGKAKELSEFYQRLPE--MGITPNSRTFVVIFHAFSRNGNLEE 758
Query: 507 AHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQ 566
A + +M AG S V+ +LL Y + L++D + AG++LD Y ++
Sbjct: 759 ARSMYRQMREAGFSPSIQVFKALLALYSRETVEIDAEELVKDIKKAGLELDMDIYNHMIS 818
Query: 567 SKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQE-VKEGQR 625
A +FK M+E F L+ ++N LL+E +K G
Sbjct: 819 LYSKLGSYRKAALVFKGMQEIGCSPDA-TTFNTLIMLYSRNQMVQEAQALLREMIKTGNA 877
Query: 626 IDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEV 685
+ + + +I + + + +DAE K + G P+A ++ M+ Y G++ ++
Sbjct: 878 PN--ISTYTTLISAYGRLQAYEDAELVFKSIAETGCKPDATAYNVMINVYRK-AGEHRKI 934
Query: 686 TELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFIDKYKYRT 745
E+ +MK+ S+ L+DS + +GG +A EV+ + E M D Y +
Sbjct: 935 EEVIEQMKADGFEPSLTTIHMLMDS----YGKGGATGKAEEVLETLPEIGMSPDAIHYTS 990
Query: 746 LF 747
+
Sbjct: 991 II 992
Score = 42.4 bits (98), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 55/240 (22%), Positives = 100/240 (41%), Gaps = 25/240 (10%)
Query: 502 GWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREV-TALLRDARSAGIQLDASC 560
G + LL M G R + ++KA + ++LL+D +AG++ D
Sbjct: 128 GDWNSVQQLLCRMQDRGCRPDLVTFNIVIKARTRGGMQEGLASSLLQDVYAAGLRPDTIT 187
Query: 561 YEALLQSKIVQKDTPGALHLFKEMKESKI-PRSGHQEFEMLVKGCAQNHEAGL-MAKLLQ 618
Y L+ + + A+ +F+EM+ P + V G A EA + +++Q
Sbjct: 188 YNTLISACSLNNRLSDAILIFEEMQRQGCDPDIWTYNAMISVYGRAGRVEAASSIFRIMQ 247
Query: 619 EVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAI 678
E Q +N+V+H F + +++ E+ MR + T+++M+ Y
Sbjct: 248 E----QGFTPDAVTYNSVLHAFARDGRIEEVERIRGMMRDARCSSDEITYNTMIHMYGK- 302
Query: 679 GGKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFV-----RGGFFARANEVVAMMEE 733
G + + EL+ +MK + DSV +T + + GF NE AM E+
Sbjct: 303 AGMHRKAEELYVQMKE---------EGRCPDSVTFTVLIDTLGKAGF---VNEAAAMFED 350
Score = 40.4 bits (93), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 52/228 (22%), Positives = 89/228 (39%), Gaps = 11/228 (4%)
Query: 527 ASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKE 586
A +L AN+P L A S+ I Y +L+ D L M++
Sbjct: 84 AVMLSVLGRANQPGLAQELFDRAESS-IGNCVQVYNSLMSVYARHGDWNSVQQLLCRMQD 142
Query: 587 SKIPRSGHQEFEMLVKGCAQN-HEAGLMAKLLQEV-KEGQRIDCGVHDWNNVIHFFCKKR 644
R F +++K + + GL + LLQ+V G R D +N +I
Sbjct: 143 RGC-RPDLVTFNIVIKARTRGGMQEGLASSLLQDVYAAGLRPD--TITYNTLISACSLNN 199
Query: 645 LMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEMKSFASSTSMNFD 704
+ DA + M+ G P+ T+++M++ Y G+ + ++ M+ D
Sbjct: 200 RLSDAILIFEEMQRQGCDPDIWTYNAMISVYGR-AGRVEAASSIFRIMQE----QGFTPD 254
Query: 705 EELLDSVLYTFVRGGFFARANEVVAMMEEGKMFIDKYKYRTLFLKYHK 752
+SVL+ F R G + MM + + D+ Y T+ Y K
Sbjct: 255 AVTYNSVLHAFARDGRIEEVERIRGMMRDARCSSDEITYNTMIHMYGK 302
Score = 40.0 bits (92), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 58/300 (19%), Positives = 125/300 (41%), Gaps = 17/300 (5%)
Query: 457 LVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISL-GWLDQAHDLL-DEM 514
LV ++ AG E + E L++ DA + +C G+ AH+LL D +
Sbjct: 571 LVASYDRAGMQDEALARFLDMTTEGLEM---DAEVLQTAVMCYCRKGFAFVAHELLIDCL 627
Query: 515 HLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQKDT 574
H V+ S+++ +++ +Y + + + RD + G + S Y ALL + +
Sbjct: 628 HAFEVK-DSAMHVAIIASYGKLKLWQNAEIVFRDLQRHGFAGNTSAYSALLSAYAETGNF 686
Query: 575 PGALHLFKEMKESKI-PRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRIDCGVHDW 633
A M + + P + + +++ + +A +++ Q + E I +
Sbjct: 687 ERATRALDNMVAAGLQPNAACANY--VLEAFGRAGKAKELSEFYQRLPE-MGITPNSRTF 743
Query: 634 NNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWG-EM 692
+ H F + +++A ++MR G P+ Q F +++ Y+ E E+ E+
Sbjct: 744 VVIFHAFSRNGNLEEARSMYRQMREAGFSPSIQVFKALLALYS------RETVEIDAEEL 797
Query: 693 KSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFIDKYKYRTLFLKYHK 752
+ D ++ + ++ + + G + +A V M+E D + TL + Y +
Sbjct: 798 VKDIKKAGLELDMDIYNHMISLYSKLGSYRKAALVFKGMQEIGCSPDATTFNTLIMLYSR 857
>gi|387219093|gb|AFJ69255.1| hypothetical protein NGATSA_2006000, partial [Nannochloropsis
gaditana CCMP526]
Length = 479
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/248 (23%), Positives = 111/248 (44%), Gaps = 24/248 (9%)
Query: 447 LQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISL----- 501
L P + L+ AF+ ++A ++ + + L V+T L
Sbjct: 61 LSPDTYTFNTLIAAFV--------ARREVRAAEKMVAYMQEHGVLADVVTYSQLLQGYAT 112
Query: 502 --GWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDAS 559
G + +A ++L+ M GV +S Y L++ Y++A +L R+ G+ +
Sbjct: 113 KEGDMGKAEEVLERMARDGVAPNSYTYNYLIEGYVKAGEMDWAEDVLERMRTVGLAPTSM 172
Query: 560 CYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEA----GLMAK 615
Y L+ + ++D GA + MK+ + ++ Q F L+ A+ + G++A+
Sbjct: 173 NYCVLMDAYTRRRDARGAEKILDRMKKEGV-QANVQVFTTLMNAYAKRGDVEGAEGVLAR 231
Query: 616 LLQEVKE--GQRIDC--GVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSM 671
+L +E G DC VH ++ +++ + + L AE L RM + G PN TF ++
Sbjct: 232 MLAVAEEEGGGSKDCEPNVHTYSTLMNVYARAGLAAGAEGVLTRMTAAGWAPNVITFTTL 291
Query: 672 VTGYAAIG 679
+T Y+ G
Sbjct: 292 MTAYSRAG 299
Score = 40.8 bits (94), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 76/330 (23%), Positives = 134/330 (40%), Gaps = 37/330 (11%)
Query: 249 MKPNTNTFNIALAGCLLFETTRKAEQLLDIMPRIGVKADSNLL--IIMAHIYERNGRREE 306
+KPN T+N L A+Q+L M + G+ D+ +I A + R R E
Sbjct: 26 LKPNAITYNSLLTAYTNAGDMAGAQQVLKRMVQAGLSPDTYTFNTLIAAFVARREVRAAE 85
Query: 307 LRKLQRHIDEAVNLSDIQFRQFYNCLLSCH-LKFGDLNSASKMVLEMLQRAKEARNSLAA 365
K+ ++ E L+D+ Y+ LL + K GD+ A + VLE + R A NS
Sbjct: 86 --KMVAYMQEHGVLADV---VTYSQLLQGYATKEGDMGKAEE-VLERMARDGVAPNSYTY 139
Query: 366 AMLPFNAVGVNNRTPSEQNVNCTNSVDLENSGIIENHILSYEDFTKDRKFVALEAEVKRV 425
L V +E + +V L + + N+ + + +T+ R R
Sbjct: 140 NYLIEGYVKAGEMDWAEDVLERMRTVGLAPTSM--NYCVLMDAYTRRRD--------ARG 189
Query: 426 LQTLLGMLQKQVELITTEHGILQPTEKIYIKLVKAFLEAGKTKE----LTHFLIKAEKEN 481
+ +L ++K+ G+ Q +++ L+ A+ + G + L L AE+E
Sbjct: 190 AEKILDRMKKE--------GV-QANVQVFTTLMNAYAKRGDVEGAEGVLARMLAVAEEEG 240
Query: 482 LQVSHDDAALGHVITLCISL----GWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEAN 537
S D H + +++ G A +L M AG + + +L+ AY A
Sbjct: 241 -GGSKDCEPNVHTYSTLMNVYARAGLAAGAEGVLTRMTAAGWAPNVITFTTLMTAYSRAG 299
Query: 538 RPREVTALLRDARSAGIQLDASCYEALLQS 567
P +L+ +AG+ + Y LL +
Sbjct: 300 DPEGAELVLKRMEAAGVSPNVLTYNTLLSA 329
Score = 39.7 bits (91), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 69/155 (44%), Gaps = 9/155 (5%)
Query: 525 VYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEM 584
Y SLL AY A +L+ AG+ D + L+ + + +++ A + M
Sbjct: 32 TYNSLLTAYTNAGDMAGAQQVLKRMVQAGLSPDTYTFNTLIAAFVARREVRAAEKMVAYM 91
Query: 585 KESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRIDCGV----HDWNNVIHFF 640
+E + + + L++G A G M K +EV E D GV + +N +I +
Sbjct: 92 QEHGVL-ADVVTYSQLLQGYATKE--GDMGK-AEEVLERMARD-GVAPNSYTYNYLIEGY 146
Query: 641 CKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGY 675
K M AE L+RMR++G P + + ++ Y
Sbjct: 147 VKAGEMDWAEDVLERMRTVGLAPTSMNYCVLMDAY 181
>gi|115446945|ref|NP_001047252.1| Os02g0582300 [Oryza sativa Japonica Group]
gi|50253069|dbj|BAD29317.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113536783|dbj|BAF09166.1| Os02g0582300 [Oryza sativa Japonica Group]
Length = 845
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 81/341 (23%), Positives = 135/341 (39%), Gaps = 26/341 (7%)
Query: 412 DRKFVALEAEVKRVLQTLLGMLQKQVELITTEHGILQPTEKIYIKLVKAFLEAGKTKELT 471
DR F +L A + R L L ++ H PT Y ++++
Sbjct: 117 DRPFASLLAHLSRFA---LAPLALRLFAHMHRHAPPAPTAPTYNAVIRSLCRRADLARAL 173
Query: 472 HFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLK 531
+L + + D +I +D A DL D+M L G YA+L++
Sbjct: 174 RYLSLMVRSGWR--PDAYTFNSLIVGYCRTNQVDVARDLFDKMPLRGFAQDVVSYATLIE 231
Query: 532 AYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPR 591
EA R E L + Q D Y AL++ + L + + MKE R
Sbjct: 232 GLCEAGRIDEAVELFGEMD----QPDMHMYAALVKGLCNAERGEEGLLMLRRMKELGW-R 286
Query: 592 SGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEK 651
+ + +V + +A ++LQE+ E C V VI+ +CK+ M DA +
Sbjct: 287 PSTRAYAAVVDFRCRERKAKEAEEMLQEMFEKGLAPC-VVTCTAVINAYCKEGRMSDALR 345
Query: 652 ALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEMKSFASSTSMNFDEELLDSV 711
L+ M+ G PN T++++V G+ GK + L +M++ + D+V
Sbjct: 346 VLELMKLRGCKPNVWTYNALVQGFCN-EGKVHKAMTLLNKMRACGVNP---------DAV 395
Query: 712 LYT-FVRG----GFFARANEVVAMMEEGKMFIDKYKYRTLF 747
Y +RG G A ++ +ME + D+Y Y L
Sbjct: 396 TYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALI 436
Score = 49.7 bits (117), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 55/250 (22%), Positives = 98/250 (39%), Gaps = 9/250 (3%)
Query: 431 GMLQKQVELITTEHGILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAA 490
G + + VEL + QP +Y LVK A + +E L+ + L A
Sbjct: 237 GRIDEAVELFGE---MDQPDMHMYAALVKGLCNAERGEE--GLLMLRRMKELGWRPSTRA 291
Query: 491 LGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDAR 550
V+ +A ++L EM G+ +++ AY + R + +L +
Sbjct: 292 YAAVVDFRCRERKAKEAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDALRVLELMK 351
Query: 551 SAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKG-CAQNHE 609
G + + Y AL+Q + A+ L +M+ + + +L++G C H
Sbjct: 352 LRGCKPNVWTYNALVQGFCNEGKVHKAMTLLNKMRACGV-NPDAVTYNLLIRGQCIDGHI 410
Query: 610 AGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFH 669
A L + EG + + +N +I+ CK A + + G PNA TF+
Sbjct: 411 ES--AFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFN 468
Query: 670 SMVTGYAAIG 679
S++ G G
Sbjct: 469 SLINGLCKSG 478
Score = 49.3 bits (116), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 41/197 (20%), Positives = 82/197 (41%), Gaps = 5/197 (2%)
Query: 502 GWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCY 561
G DQA L D + G++ ++ + SL+ ++ + L SAG D Y
Sbjct: 443 GRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSGKADIAWKFLEKMVSAGCTPDTYTY 502
Query: 562 EALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQE-V 620
+ ++ K + L EM + + + + +++ + GL+A+ E V
Sbjct: 503 SSFIEHLCKMKGSQEGLSFIGEMLQKDV-KPSTVNYTIVIHKLLKERNYGLVARTWGEMV 561
Query: 621 KEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGG 680
G D V + + +C + + +AE L M G + +++++ G+A+I G
Sbjct: 562 SSGCNPD--VVTYTTSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAYNTLMDGHASI-G 618
Query: 681 KYTEVTELWGEMKSFAS 697
+ + +M S AS
Sbjct: 619 QTDHAVSILKQMTSVAS 635
>gi|242032435|ref|XP_002463612.1| hypothetical protein SORBIDRAFT_01g002930 [Sorghum bicolor]
gi|241917466|gb|EER90610.1| hypothetical protein SORBIDRAFT_01g002930 [Sorghum bicolor]
Length = 638
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/252 (24%), Positives = 105/252 (41%), Gaps = 16/252 (6%)
Query: 484 VSHDDAALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVT 543
VS D + +++ S G L + +L EM + G A +S Y L++A+ E
Sbjct: 52 VSPDTVSYRYIVDAFASAGNLSRVAELFSEMAVMGNTADASAYLGLMEAHTRVGATAEAV 111
Query: 544 ALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQE--FEMLV 601
A+LR ++ G A+ Y LL Q G LF+EM+ + P + F +
Sbjct: 112 AVLRQMQADGCAPTAATYRVLLDLYGRQGRFDGVRELFREMRTAVPPDTATYNVLFRVYG 171
Query: 602 KGCAQNHEAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGH 661
G L +L+ E + C NV+ + L +DA + L+ M G
Sbjct: 172 DGGFFKEVVELFHDMLETGVEPDMVTC-----ENVMAACGRGGLHEDAREVLEYMTREGM 226
Query: 662 LPNAQTFHSMVT--GYAAIGGKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGG 719
+P A + +V G+AA+ Y E + M S ++ E +++ + + RGG
Sbjct: 227 VPTADAYTGLVEALGHAAM---YEEAYVAFNMMTEIGSLPTL----ETYNTLAFAYARGG 279
Query: 720 FFARANEVVAMM 731
F A + + M
Sbjct: 280 LFQEAEAIFSRM 291
>gi|357139229|ref|XP_003571186.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g16010-like [Brachypodium distachyon]
Length = 628
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 78/340 (22%), Positives = 136/340 (40%), Gaps = 24/340 (7%)
Query: 444 HGILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGW 503
H +P Y +L++ +AG+ E +F + +E + D + ++I G
Sbjct: 289 HQYCRPDVFTYTELIRGLGKAGRFDEAYNFFHEMRREGCR--PDTVVINNMINFLGKAGR 346
Query: 504 LDQAHDLLDEMHLAGVRASSSVYASLLKAYIEA-NRPREVTALLRDARSAGIQLDASCYE 562
LD A L +EM S Y +++KA E+ +R E+++ + +GI Y
Sbjct: 347 LDDAVKLFEEMGTLQCIPSVVTYNTIIKALFESKSRISEISSWFERMKGSGISPSPFTYS 406
Query: 563 ALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKE 622
L+ T A+ L +EM E P + L+ + + +L QE+KE
Sbjct: 407 ILIDGFCKTNRTEKAMMLLEEMDEKGFPPCP-AAYCSLIDALGKAKRYDIAHELFQELKE 465
Query: 623 GQRIDCGVHD---WNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIG 679
+CG + +I K + DA M LG PN ++++++G A
Sbjct: 466 ----NCGSSSARVYAVMIKHLGKAGRLDDAVNLFDEMNKLGCTPNVYAYNALMSGLAR-A 520
Query: 680 GKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFID 739
G E M+ +N +L+ + T G RA E+++ M++ + D
Sbjct: 521 GMLDEALTTMRRMQEHGCIPDINSYNIILNGLAKT----GGPHRAMEMLSNMKQSAIKPD 576
Query: 740 KYKYRTLF-LKYHKTLYKGKTPKFQTEAQLKKREAALGFK 778
Y T+ H L F+ A+L K LGF+
Sbjct: 577 AVSYNTVLGAMSHAGL-------FEEAAKLMKEMNVLGFE 609
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 97/213 (45%), Gaps = 5/213 (2%)
Query: 490 ALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSV-YASLLKAYIEANRPREVTALLRD 548
A +I + + G ++ H+L +EM G +V Y++L+ A+ + R LL +
Sbjct: 192 AYNSMIIMLMHEGQYEKVHELYNEMSNEGHCFPDTVTYSALISAFCKLGRQDSAIRLLNE 251
Query: 549 ARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNH 608
+ G+Q A Y L+ + GAL LF+EM+ + R + L++G +
Sbjct: 252 MKDNGMQPTAKIYTMLIALFFKLNNVHGALGLFEEMRH-QYCRPDVFTYTELIRGLGKAG 310
Query: 609 EAGLMAKLLQEV-KEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQT 667
E+ +EG R D V NN+I+F K + DA K + M +L +P+ T
Sbjct: 311 RFDEAYNFFHEMRREGCRPDTVV--INNMINFLGKAGRLDDAVKLFEEMGTLQCIPSVVT 368
Query: 668 FHSMVTGYAAIGGKYTEVTELWGEMKSFASSTS 700
+++++ + +E++ + MK S S
Sbjct: 369 YNTIIKALFESKSRISEISSWFERMKGSGISPS 401
>gi|356513567|ref|XP_003525484.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74850,
chloroplastic-like [Glycine max]
Length = 857
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 66/301 (21%), Positives = 127/301 (42%), Gaps = 11/301 (3%)
Query: 444 HGILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGW 503
H +QP Y L+ A G E + + E+ + D +++ L
Sbjct: 233 HEGIQPDVITYNTLLGACAHRGLGDE-AEMVFRTMNES-GIVPDINTYSYLVQTFGKLNR 290
Query: 504 LDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEA 563
L++ +LL EM G + Y LL+AY E +E + R ++AG +A+ Y
Sbjct: 291 LEKVSELLREMECGGNLPDITSYNVLLEAYAELGSIKEAMGVFRQMQAAGCVANAATYSV 350
Query: 564 LLQSKIVQKDTPGALHLFKEMKESKI-PRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKE 622
LL LF EMK S P +G + +L++ + + L ++ E
Sbjct: 351 LLNLYGKHGRYDDVRDLFLEMKVSNTDPDAG--TYNILIQVFGEGGYFKEVVTLFHDMAE 408
Query: 623 GQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKY 682
+ ++ + + +I K L +DA+K L M G +P+++ + ++ + Y
Sbjct: 409 -ENVEPNMQTYEGLIFACGKGGLYEDAKKILLHMNEKGVVPSSKAYTGVIEAFGQ-AALY 466
Query: 683 TEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFIDKYK 742
E ++ M S+ ++ E +S+++ F RGG + A +++ M E + D +
Sbjct: 467 EEALVMFNTMNEVGSNPTV----ETYNSLIHAFARGGLYKEAEAILSRMNESGLKRDVHS 522
Query: 743 Y 743
+
Sbjct: 523 F 523
Score = 62.8 bits (151), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 86/431 (19%), Positives = 158/431 (36%), Gaps = 66/431 (15%)
Query: 248 AMKPNTNTFNIALAGCLLFETTRKAEQLLDIMPRIGVKADSNLLIIMAHIYERNGRREEL 307
++P+ T+N L C +AE + M G+ D N + + + R E++
Sbjct: 235 GIQPDVITYNTLLGACAHRGLGDEAEMVFRTMNESGIVPDINTYSYLVQTFGKLNRLEKV 294
Query: 308 RKLQRHIDEAVNLSDIQFRQFYNCLLSCHLKFGDLNSASKMVLEMLQRAKEARNSLAAAM 367
+L R ++ NL DI YN LL + + G + A V +Q A N+ ++
Sbjct: 295 SELLREMECGGNLPDITS---YNVLLEAYAELGSIKEAMG-VFRQMQAAGCVANAATYSV 350
Query: 368 LPFNAVGVNNRTPSEQNVNCTNSVDLENSGIIENHILSYEDFTKDRKFVALEAEVKRVLQ 427
L N G + R Y+D + + LE +V
Sbjct: 351 L-LNLYGKHGR---------------------------YDDV----RDLFLEMKVSNT-- 376
Query: 428 TLLGMLQKQVELITTEHGILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHD 487
P Y L++ F E G KE+ +EN++ +
Sbjct: 377 --------------------DPDAGTYNILIQVFGEGGYFKEVVTLFHDMAEENVEPNMQ 416
Query: 488 DAALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLR 547
+I C G + A +L M+ GV SS Y +++A+ +A E +
Sbjct: 417 --TYEGLIFACGKGGLYEDAKKILLHMNEKGVVPSSKAYTGVIEAFGQAALYEEALVMFN 474
Query: 548 DARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQN 607
G Y +L+ + A + M ES + R H F +++ Q
Sbjct: 475 TMNEVGSNPTVETYNSLIHAFARGGLYKEAEAILSRMNESGLKRDVHS-FNGVIEAFRQ- 532
Query: 608 HEAGLMAKLLQEVKEGQRIDCGVHDWN--NVIHFFCKKRLMQDAEKALKRMRSLGHLPNA 665
G + ++ E ++ +C ++ V+ +C L+ + E+ + +++ G LP+
Sbjct: 533 --GGQYEEAVKSYVEMEKANCEPNELTLEAVLSIYCSAGLVDEGEEQFQEIKASGILPSV 590
Query: 666 QTFHSMVTGYA 676
+ M+ YA
Sbjct: 591 MCYCMMLALYA 601
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 100/508 (19%), Positives = 197/508 (38%), Gaps = 97/508 (19%)
Query: 270 RKAEQLLDIMPR-IGVKADSNLLIIMAHIYERNGRREELRKLQRHIDEAVNLSDIQFRQF 328
+++ +L M R I K + ++ IM + R G ++ R++ DE + ++
Sbjct: 115 QRSLRLFKYMQRQIWCKPNEHIHTIMITLLGREGLLDKCREV---FDEMPSNGVVRTVYS 171
Query: 329 YNCLLSCHLKFGDLNSASKMVLEMLQRAKEARNSLAAAMLPFNAVGVNNRTPSEQNVNCT 388
Y +++ + + G +++ LE+L K+ R ++ ++L +N V +N
Sbjct: 172 YTAIINAYGRNGQFHAS----LELLNGMKQER--VSPSILTYNTV-----------INAC 214
Query: 389 NSVDLENSGI-----------IENHILSYEDFTKDRKFVALEAEVKRVLQTLLGMLQKQV 437
L+ G+ I+ +++Y L E + V +T+
Sbjct: 215 ARGGLDWEGLLGLFAEMRHEGIQPDVITYNTLLGACAHRGLGDEAEMVFRTM-------- 266
Query: 438 ELITTEHGILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAE-KENLQVSHDDAALGHVIT 496
E GI+ P Y LV+ F + + ++++ L + E NL D + ++
Sbjct: 267 ----NESGIV-PDINTYSYLVQTFGKLNRLEKVSELLREMECGGNLP---DITSYNVLLE 318
Query: 497 LCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQL 556
LG + +A + +M AG A+++ Y+ LL Y + R +V L + + +
Sbjct: 319 AYAELGSIKEAMGVFRQMQAAGCVANAATYSVLLNLYGKHGRYDDVRDLFLEMKVSNTDP 378
Query: 557 DASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQN--------- 607
DA Y L+Q + LF +M E + Q +E L+ C +
Sbjct: 379 DAGTYNILIQVFGEGGYFKEVVTLFHDMAEENV-EPNMQTYEGLIFACGKGGLYEDAKKI 437
Query: 608 -----------------------------HEAGLMAKLLQEVKEGQRIDCGVHDWNNVIH 638
EA +M + EV ++ +N++IH
Sbjct: 438 LLHMNEKGVVPSSKAYTGVIEAFGQAALYEEALVMFNTMNEVGSNPTVET----YNSLIH 493
Query: 639 FFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEMKSFASS 698
F + L ++AE L RM G + +F+ ++ + GG+Y E + + EM+
Sbjct: 494 AFARGGLYKEAEAILSRMNESGLKRDVHSFNGVIEAFRQ-GGQYEEAVKSYVEME----K 548
Query: 699 TSMNFDEELLDSVLYTFVRGGFFARANE 726
+ +E L++VL + G E
Sbjct: 549 ANCEPNELTLEAVLSIYCSAGLVDEGEE 576
>gi|449476143|ref|XP_004154653.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g01110-like [Cucumis sativus]
Length = 749
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 89/434 (20%), Positives = 166/434 (38%), Gaps = 68/434 (15%)
Query: 247 IAMKPNTNTFNIALAGCLLFETTRKAEQLLDIMPRIGVKADSNLLIIMAHIYERNGRREE 306
+ + PN T+N L + +A+++ D M R GV D + + RNG
Sbjct: 356 LGLTPNAATYNTLLVEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNG---H 412
Query: 307 LRKLQRHIDEAVNLSDIQFRQFYNCLLSCHLKFGDLNSASKMVLEMLQRAKEARNSLAAA 366
L + H E + Y L+ + G L+ A KM EML R
Sbjct: 413 LYQALMHFREMERSGIVPDNVIYTILIDGFCRNGALSDALKMRDEMLARG------CFMD 466
Query: 367 MLPFNAVGVNNRTPSEQNVNCTNSVDLENSGIIENHILSYEDFTKDRKFVALEAEVKRVL 426
++ +N +N + + L N + + + FT + + + + L
Sbjct: 467 VVTYNTF-LNGLCKKKMFADADM---LFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKAL 522
Query: 427 QTLLGMLQKQVELITTEHGILQPTEKIYIKLVKAFLEAG---KTKELTHFLIKAEKENLQ 483
M++ L+P + Y L+ F +AG + KEL +I+ +
Sbjct: 523 NLFEAMVRTN----------LKPDKVTYNTLIDGFCKAGEMGRAKELWDDMIRKD----- 567
Query: 484 VSHDDAALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVT 543
+ D + G V+ S G L +A +L D+M G+R + +L+K Y + +
Sbjct: 568 IIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNLVTCNTLIKGYCRSGDMPKAY 627
Query: 544 ALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKG 603
L S GI D+ Y L+ + + + A L EM++ + +F ++
Sbjct: 628 EYLSKMISNGIIPDSFSYNTLIDGYLKEANLEKAFILINEMEKRGL------QFNIIT-- 679
Query: 604 CAQNHEAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLP 663
+N +++ FC + MQ+AE+ L++M +G P
Sbjct: 680 -----------------------------YNLILNGFCAEGKMQEAEQVLRKMIEIGINP 710
Query: 664 NAQTFHSMVTGYAA 677
+ T+ S++ G+ +
Sbjct: 711 DGATYSSLINGHVS 724
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 59/252 (23%), Positives = 108/252 (42%), Gaps = 10/252 (3%)
Query: 497 LCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQL 556
LC +G D+A D+L EM G+ +++ Y +LL + E + + G+
Sbjct: 337 LC-KIGKYDRAKDVLIEMLQLGLTPNAATYNTLLVEICRRDNILEAQEIFDEMSRRGVLP 395
Query: 557 DASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKL 616
D + +L+ AL F+EM+ S I + + +L+ G +N K+
Sbjct: 396 DLVSFSSLIGVLARNGHLYQALMHFREMERSGIV-PDNVIYTILIDGFCRNGALSDALKM 454
Query: 617 LQE-VKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGY 675
E + G +D V +N ++ CKK++ DA+ M G +P+ TF +++ GY
Sbjct: 455 RDEMLARGCFMD--VVTYNTFLNGLCKKKMFADADMLFNEMVERGMVPDFYTFTTLIRGY 512
Query: 676 AAIGGKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGK 735
G + L+ M T++ D+ ++++ F + G RA E+ M
Sbjct: 513 CK-DGNMDKALNLFEAM----VRTNLKPDKVTYNTLIDGFCKAGEMGRAKELWDDMIRKD 567
Query: 736 MFIDKYKYRTLF 747
+ D Y T+
Sbjct: 568 IIPDHISYGTVL 579
Score = 44.3 bits (103), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 34/168 (20%), Positives = 79/168 (47%), Gaps = 3/168 (1%)
Query: 525 VYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEM 584
+Y L++ Y++A + RE + + R G+ + + LL + A ++ E+
Sbjct: 189 IYDLLVRTYVQAKKLREGSEAFQILRRKGVSVSINACNKLLGGLVRTGWVDLAWEIYGEV 248
Query: 585 KESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKR 644
I + + ++V ++ + + L ++ EG+ + + +N +I+ +C++
Sbjct: 249 VRGGIELNVYT-LNIMVNALCKDRKFENVMFFLSDM-EGKGVFADIVTYNTLINAYCREG 306
Query: 645 LMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEM 692
L+++A + L S G P T+++++ G I GKY ++ EM
Sbjct: 307 LVEEAFQLLNSFSSRGMEPGLLTYNAILYGLCKI-GKYDRAKDVLIEM 353
Score = 43.1 bits (100), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 55/275 (20%), Positives = 108/275 (39%), Gaps = 21/275 (7%)
Query: 502 GWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCY 561
G L A + DEM G Y + L + + L + G+ D +
Sbjct: 446 GALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFADADMLFNEMVERGMVPDFYTF 505
Query: 562 EALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVK 621
L++ + AL+LF+ M + + + + L+ G + E G +L ++
Sbjct: 506 TTLIRGYCKDGNMDKALNLFEAMVRTNL-KPDKVTYNTLIDGFCKAGEMGRAKELWDDMI 564
Query: 622 EGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGK 681
I + + V++ FC L+ +A +M G PN T ++++ GY
Sbjct: 565 RKDIIPDHI-SYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNLVTCNTLIKGYCR---- 619
Query: 682 YTEVTELWGEM-KSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFIDK 740
G+M K++ + M + + DS Y + G+ AN +E+ + I++
Sbjct: 620 -------SGDMPKAYEYLSKMISNGIIPDSFSYNTLIDGYLKEAN-----LEKAFILINE 667
Query: 741 YKYRTLFLKYHKTLYKGKTPKFQTEAQLKKREAAL 775
+ R L+++ Y F E ++++ E L
Sbjct: 668 MEKRG--LQFNIITYNLILNGFCAEGKMQEAEQVL 700
>gi|356519757|ref|XP_003528536.1| PREDICTED: protein Rf1, mitochondrial-like [Glycine max]
Length = 871
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 101/439 (23%), Positives = 174/439 (39%), Gaps = 41/439 (9%)
Query: 245 PLIAMKPNTNTFNIALAGCLLFETTRKAEQLLDIMPRIGVKADSNLLIIMAHIYERNGRR 304
P P+ TFNI + C + T A L +M R GV+ + H R G
Sbjct: 274 PKFMCSPDVVTFNILINACCIGGRTWVAIDWLHLMVRSGVEPSVATFTTILHALCREGNV 333
Query: 305 EELRKLQRHIDEAVNLSDIQFRQFYNCLLSCHLKFGDLNSASKMVLEMLQRAKEARNSLA 364
E RKL D ++ YN L+ + K ++ AS ++ E ++ + + +
Sbjct: 334 VEARKL---FDGIQDMGIAPNAAIYNTLMDGYFKAREVAQAS-LLYEEMRTTGVSPDCVT 389
Query: 365 AAMLPFNAVGVNNRTPSEQNVNCTNSVDLENSGIIENHILSYEDFTKDRKFVALEAEVKR 424
+L + S++ + DL SG+ + L Y+ + E +
Sbjct: 390 FNILVWGHYKYGRIEDSDRLLK-----DLIVSGLFLDSSL-YDVMVSSLCWAGRLDEAMK 443
Query: 425 VLQTLLGMLQKQVELITTEHGILQPTEKIYIKLVKAFLEAG---KTKELTHFLIKAEKEN 481
+LQ LL E G L + + L+ A+ AG K E +++
Sbjct: 444 LLQELL------------EKG-LTLSVVAFNSLIGAYSRAGLEDKAFEAYRIMVRCGFTP 490
Query: 482 LQVSHDDAALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPRE 541
+ + +G LC GWL +A LL M G + Y LL Y + N
Sbjct: 491 SSSTCNSLLMG----LCRK-GWLQEARILLYRMLEKGFPINKVAYTVLLDGYFKMNNLEG 545
Query: 542 VTALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKE-SKIPRSGHQEFEML 600
L ++ + GI DA + AL+ + A +F EM +P + + L
Sbjct: 546 AQFLWKEMKERGIYPDAVAFTALIDGLSKAGNVEEAYEVFLEMSAIGFVPN--NFAYNSL 603
Query: 601 VKG---CAQNHEAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMR 657
++G C + EA KL +E+++ + +N +I FC++ M+ A + M+
Sbjct: 604 IRGLCDCGRVTEA---LKLEKEMRQKGLLS-DTFTFNIIIDGFCRRGQMKFAIETFLDMQ 659
Query: 658 SLGHLPNAQTFHSMVTGYA 676
+G LP+ TF+ ++ GY
Sbjct: 660 RIGLLPDIFTFNILIGGYC 678
Score = 48.1 bits (113), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 84/196 (42%), Gaps = 19/196 (9%)
Query: 506 QAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALL 565
QA L +EM GV + L+ + + R + LL+D +G+ LD+S Y+ ++
Sbjct: 370 QASLLYEEMRTTGVSPDCVTFNILVWGHYKYGRIEDSDRLLKDLIVSGLFLDSSLYDVMV 429
Query: 566 QSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQR 625
S A+ L +E+ E + S F L+ ++ AGL K + + R
Sbjct: 430 SSLCWAGRLDEAMKLLQELLEKGLTLS-VVAFNSLIGAYSR---AGLEDKAFEAYRIMVR 485
Query: 626 IDCGV----HDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAI--- 678
CG N+++ C+K +Q+A L RM G N + ++ GY +
Sbjct: 486 --CGFTPSSSTCNSLLMGLCRKGWLQEARILLYRMLEKGFPINKVAYTVLLDGYFKMNNL 543
Query: 679 -GGKYTEVTELWGEMK 693
G ++ LW EMK
Sbjct: 544 EGAQF-----LWKEMK 554
>gi|356549285|ref|XP_003543024.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g46100-like [Glycine max]
Length = 479
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/247 (23%), Positives = 102/247 (41%), Gaps = 6/247 (2%)
Query: 447 LQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVI-TLCISLGWLD 505
L+PT+K Y+ ++ +E K F E L + +L +I LC + +D
Sbjct: 116 LRPTQKAYLTILDILVEENHVKRAIGFY--REMRELGIPSSVVSLNILIKALCKNKETVD 173
Query: 506 QAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALL 565
A + EM G + S Y +L+ E L ++ G Y +L+
Sbjct: 174 SALRIFQEMPNRGCQPDSYTYGTLINGLCRLGNISEAKELFKEMEQKGFSASVVTYTSLI 233
Query: 566 QSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQR 625
+ A+ L +EMK + I + ++ C H + M L EV + +
Sbjct: 234 HGLCQSNNLDEAIGLLEEMKRNDIEPNVFTYSSLMDGLCKGGHSSQAMQ--LLEVMDKKH 291
Query: 626 IDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEV 685
+ ++ +I+ CK+R +++A + L RMR G PNA + +++G A G Y E
Sbjct: 292 HLPNMVTYSTLINGLCKERKLREAVEILDRMRIQGLKPNAGLYGKIISGLCA-AGSYQEA 350
Query: 686 TELWGEM 692
EM
Sbjct: 351 ANFIDEM 357
>gi|242066030|ref|XP_002454304.1| hypothetical protein SORBIDRAFT_04g028250 [Sorghum bicolor]
gi|241934135|gb|EES07280.1| hypothetical protein SORBIDRAFT_04g028250 [Sorghum bicolor]
Length = 638
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 70/308 (22%), Positives = 123/308 (39%), Gaps = 16/308 (5%)
Query: 444 HGILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGW 503
H +P Y +L++ +AG+ E HF + ++E + D + ++I G
Sbjct: 293 HQYCRPDVFTYTELIRGLGKAGRIDEAYHFFYEMQREGCR--PDTVVMNNMINFLGKAGR 350
Query: 504 LDQAHDLLDEMHLAGVRASSSVYASLLKAYIEA-NRPREVTALLRDARSAGIQLDASCYE 562
LD A L EM S Y +++KA E+ +R EV + + +GI + Y
Sbjct: 351 LDDAMKLFQEMGTLRCIPSVVTYNTIIKALFESKSRASEVPSWFERMKESGISPSSFTYS 410
Query: 563 ALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKE 622
L+ A+ L +EM E P + L+ + L +L QE+KE
Sbjct: 411 ILIDGFCKTNRMEKAMMLLEEMDEKGFPPCP-AAYCSLIDALGKAKRYDLACELFQELKE 469
Query: 623 GQRIDCGVHD---WNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIG 679
+CG + +I K + DA M LG P+ ++++++G A
Sbjct: 470 ----NCGSSSARVYAVMIKHLGKAGRLDDAINMFDEMNKLGCAPDVYAYNALMSGLART- 524
Query: 680 GKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFID 739
G E M+ +N +L+ + T G RA E+++ M++ + D
Sbjct: 525 GMLDEALSTMRRMQEHGCIPDINSYNIILNGLAKT----GGPHRAMEMLSNMKQSTVRPD 580
Query: 740 KYKYRTLF 747
Y T+
Sbjct: 581 VVSYNTVL 588
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 61/248 (24%), Positives = 107/248 (43%), Gaps = 16/248 (6%)
Query: 490 ALGHVITLCISLGWLDQAHDLLDEMHLAG-VRASSSVYASLLKAYIEANRPREVTALLRD 548
A +I + + G + H+L +EM G + Y++L+ A+ + R T LL +
Sbjct: 196 AYNSMIIMLMHEGQYGKVHELYNEMSTEGHCFPDTMTYSALISAFCKLGRRDSATQLLNE 255
Query: 549 ARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNH 608
+ G+Q Y L+ D GAL LF+EM+ + R + L++G +
Sbjct: 256 MKENGMQPTTKIYTMLITLFFKLDDVHGALSLFEEMRH-QYCRPDVFTYTELIRGLGKAG 314
Query: 609 EAGLMAKLLQEV-KEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQT 667
E+ +EG R D V NN+I+F K + DA K + M +L +P+ T
Sbjct: 315 RIDEAYHFFYEMQREGCRPDTVV--MNNMINFLGKAGRLDDAMKLFQEMGTLRCIPSVVT 372
Query: 668 FHSMVTGYAAIGGKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFA--RAN 725
+++++ + +EV + MK S S S Y+ + GF R
Sbjct: 373 YNTIIKALFESKSRASEVPSWFERMKESGISPS---------SFTYSILIDGFCKTNRME 423
Query: 726 EVVAMMEE 733
+ + ++EE
Sbjct: 424 KAMMLLEE 431
>gi|15242557|ref|NP_195906.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75181167|sp|Q9LYZ9.1|PP362_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g02860
gi|7413561|emb|CAB86040.1| putative protein [Arabidopsis thaliana]
gi|332003145|gb|AED90528.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 819
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 72/336 (21%), Positives = 133/336 (39%), Gaps = 39/336 (11%)
Query: 448 QPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQA 507
+PT Y ++ F + G L++ K + ++ D +IT C +A
Sbjct: 240 KPTLITYNVILNVFGKMGTPWNKITSLVEKMKSD-GIAPDAYTYNTLITCCKRGSLHQEA 298
Query: 508 HDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQS 567
+ +EM AG Y +LL Y +++RP+E +L + G Y +L+ +
Sbjct: 299 AQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISA 358
Query: 568 KIVQKDTPGALHLFKEMKE--------------SKIPRSGHQEF------EMLVKGCAQN 607
A+ L +M E S R+G E EM GC N
Sbjct: 359 YARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPN 418
Query: 608 --------HEAGLMAKLLQEVKEGQRID-CGVH----DWNNVIHFFCKKRLMQDAEKALK 654
G K + +K I+ CG+ WN ++ F + + + K
Sbjct: 419 ICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFK 478
Query: 655 RMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYT 714
M+ G +P +TF+++++ Y+ G + + ++ M + D ++VL
Sbjct: 479 EMKRAGFVPERETFNTLISAYSRC-GSFEQAMTVYRRMLDAGVTP----DLSTYNTVLAA 533
Query: 715 FVRGGFFARANEVVAMMEEGKMFIDKYKYRTLFLKY 750
RGG + ++ +V+A ME+G+ ++ Y +L Y
Sbjct: 534 LARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAY 569
Score = 44.3 bits (103), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 90/491 (18%), Positives = 182/491 (37%), Gaps = 79/491 (16%)
Query: 248 AMKPNTNTFNIALAGCLLFETTRKAEQLLDIMPRIGVKADSNLLIIMAHIYERNGR-REE 306
+ P+ T+N + C ++A Q+ + M G D + +Y ++ R +E
Sbjct: 274 GIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEA 333
Query: 307 LRKLQRHIDEAVNLSDIQFRQFYNCLLSCHLKFGDLNSASKMVLEMLQRAKEARNSLAAA 366
++ L + + S + YN L+S + + G L+ A ++ +M ++ +
Sbjct: 334 MKVLNEMVLNGFSPSIVT----YNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTT 389
Query: 367 MLP-FNAVGVNNRTPSEQNVNCTNSV--DLENSGIIENHILSYEDFTKDRKFVALEAEVK 423
+L F G V S+ ++ N+G N I ++ F K E+
Sbjct: 390 LLSGFERAG---------KVESAMSIFEEMRNAGCKPN-ICTFNAFIKMYGNRGKFTEMM 439
Query: 424 RVL---------------QTLLGMLQKQVELITTEHGILQ--------PTEKIYIKLVKA 460
++ TLL + Q + + G+ + P + + L+ A
Sbjct: 440 KIFDEINVCGLSPDIVTWNTLLAVF-GQNGMDSEVSGVFKEMKRAGFVPERETFNTLISA 498
Query: 461 FLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQAHDLLDEMHLAGVR 520
+ G ++ + + V+ D + V+ G +Q+ +L EM +
Sbjct: 499 YSRCGSFEQA--MTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCK 556
Query: 521 ASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHL 580
+ Y SLL AY + +L + S I+ A + L+ P A
Sbjct: 557 PNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERA 616
Query: 581 FKEMKE-----------SKIPRSGHQEFEMLVKGC-----------------------AQ 606
F E+KE S + G ++ G ++
Sbjct: 617 FSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSR 676
Query: 607 NHEAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQ 666
+ + G ++L+E+ + I + +N VI+ +C+ M+DA + MR+ G +P+
Sbjct: 677 SADFGKSEEILREIL-AKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVI 735
Query: 667 TFHSMVTGYAA 677
T+++ + YAA
Sbjct: 736 TYNTFIGSYAA 746
>gi|449463623|ref|XP_004149531.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g59040-like [Cucumis sativus]
Length = 580
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/287 (23%), Positives = 132/287 (45%), Gaps = 19/287 (6%)
Query: 443 EHGILQPTEKIYIKLVKAFLEAGKTKE---LTHFLIKAEKENLQVSHDDAALGHVITLCI 499
+ G +P+ Y ++K F+E K KE L L+ EK L+ D +I +
Sbjct: 200 QSGGPEPSALTYQIMLKTFVEGSKFKEAEELFDSLLNKEKPVLK--PDQKMFHMIIYMFK 257
Query: 500 SLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDAS 559
G ++A + EM GV ++ Y SL+ E N +EV+ + + AG+Q D
Sbjct: 258 KAGNYEKARKVFAEMAARGVPQTTVTYNSLMS--FETNY-KEVSKIYDQMQRAGLQPDVV 314
Query: 560 CYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLM--AKLL 617
Y L+ + + AL +F+EM ++ I R H+ + +L+ A +G++ AK++
Sbjct: 315 SYALLISAYGKARREEEALAVFEEMLDAGI-RPTHKAYNILLDAFAI---SGMVEQAKIV 370
Query: 618 QEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAA 677
+ + R + + ++ + M+ AE +R++ G PN T+ +++ GYA
Sbjct: 371 FKSMKRDRCSPDICSYTTMLSAYVNASDMEGAENFFRRLKQDGFRPNVVTYGTLIKGYAK 430
Query: 678 IGGKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARA 724
I ++ + + EMK + ++ +L +++ + + F A
Sbjct: 431 INN-LEKMIKRYEEMK----VNGIRVNQTILTTIMDAYGKNKDFGSA 472
Score = 40.8 bits (94), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 47/92 (51%), Gaps = 2/92 (2%)
Query: 640 FCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEMKSFASST 699
+ + R +AE +RM+S G P+A T+ M+ + G K+ E EL+ + +
Sbjct: 183 YGRGRRYNNAEAIFRRMQSGGPEPSALTYQIMLKTFVE-GSKFKEAEELFDSLLN-KEKP 240
Query: 700 SMNFDEELLDSVLYTFVRGGFFARANEVVAMM 731
+ D+++ ++Y F + G + +A +V A M
Sbjct: 241 VLKPDQKMFHMIIYMFKKAGNYEKARKVFAEM 272
>gi|255566084|ref|XP_002524030.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223536757|gb|EEF38398.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 1016
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 108/510 (21%), Positives = 214/510 (41%), Gaps = 54/510 (10%)
Query: 247 IAMKPNTNTFNIALAGCLLFETTRKAEQLLDIMPRIGVKADSNLLIIMAHIYERNGRREE 306
+ ++ +T T+N + G +A L IM VK D+ I +I + R
Sbjct: 71 VDVEVDTVTYNTVIWGFCQHGLVNQAFGFLSIM----VKKDTCFDTITCNILVKGFCRIG 126
Query: 307 LRKL-QRHIDEAVNLSDIQFRQFYNCLLSCHLKFGDLNSASKMVLEMLQRAKEARNSLAA 365
L K +R +D V+ + +N L+ + K G+++ A L++++R + + L +
Sbjct: 127 LAKYGERIMDNLVSGGTCKDVIGFNTLIDGYCKAGEMSLA----LDLVERMR--KEGLLS 180
Query: 366 AMLPFNAV--GVNNRTPSEQNVNCTNSVDLENSGIIENHILSYEDFTKDRKFVALEAEVK 423
++ +N + G R ++ + + + E+ G+ ++ + +D K + LEA++
Sbjct: 181 DIVSYNTLINGFCKRGEYDKAKSLLHEIS-ESRGVKDSVFFNIDDRIKKDDNLNLEADL- 238
Query: 424 RVLQTLLGMLQKQVELITTEHGILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQ 483
T++ KQ HG L+ +Y +++ + FL
Sbjct: 239 ITYTTIISTYCKQ-------HG-LEEARALYEEMI-----------INGFL--------- 270
Query: 484 VSHDDAALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVT 543
D ++ G L +A +LL EM GV + Y +L+ + +A E
Sbjct: 271 --PDVVTYSSIVNGLCKDGRLSEAQELLREMKKMGVDPNHVAYTTLIDSLFKAGSAWEAF 328
Query: 544 ALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEM-KESKIPRSGHQEFEMLVK 602
A G+ LD L+ A +F+ + K + IP S + L+
Sbjct: 329 ACQSQLVVRGMTLDLVMCTTLVDGLFKSSKPKEAEDMFRALSKLNLIPNS--ITYTALID 386
Query: 603 GCAQNHEAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHL 662
G + + + LLQE++E + I+ V ++++I+ + KK ++ +A +K+M +
Sbjct: 387 GYCKVGDMERVESLLQEMEE-KHINPNVITYSSIINGYTKKGILDEAINVMKKMLDQNII 445
Query: 663 PNAQTFHSMVTGYAAIGGKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFA 722
PNA + ++ GY GK T+L+ EMK + + + L D ++ RG
Sbjct: 446 PNAYVYAILIDGYCK-AGKQEIATDLYNEMK----LSGLKVNNVLFDVLVNNLKRGKRMD 500
Query: 723 RANEVVAMMEEGKMFIDKYKYRTLFLKYHK 752
A E++ + + +D Y +L + K
Sbjct: 501 EAEELLKDVTSRGLLLDHVNYTSLMDGFFK 530
Score = 55.8 bits (133), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 98/486 (20%), Positives = 194/486 (39%), Gaps = 76/486 (15%)
Query: 251 PNTNTFNIALAGCLLFETTRKAEQLLDIMPRIGVKADSNLLIIMAHIYERNGRREELRKL 310
PN + I + G A L + M G+K ++ L ++ + +R R +E +L
Sbjct: 446 PNAYVYAILIDGYCKAGKQEIATDLYNEMKLSGLKVNNVLFDVLVNNLKRGKRMDEAEEL 505
Query: 311 QRHIDEAVNLSDIQFRQFYNCLLSCHLKFGDLNSASKMVLEMLQRAKEARNSLAAAMLPF 370
+ + L D Y L+ K G ++A MV EM +++ +PF
Sbjct: 506 LKDVTSRGLLLD---HVNYTSLMDGFFKAGKESAALNMVEEMTEKS-----------IPF 551
Query: 371 NAVGVNNRTPSEQNVNCTNSVDLENSGIIENHILSYEDFTKDRKFVALEAEVKRVLQTLL 430
+ V N ++ N +L + + E K V
Sbjct: 552 DVVTYN---------------------VLINGLLEHGKY-----------EAKSVYS--- 576
Query: 431 GMLQKQVELITTEHGILQPTEKIYIKLVKAFLEAGKTKELTHFL-IKAEKENLQVSHDDA 489
GM+ E G L P + Y ++KA+ + G EL + L + E ++ ++
Sbjct: 577 GMI---------EMG-LAPNQATYNIMIKAYCKQG---ELDNALELWNEMKSHKIMPSSI 623
Query: 490 ALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDA 549
++ G +++A ++L+EM + G+ + ++ LL A ++ + V +
Sbjct: 624 TCNTLVVGLSEAGEIEKAMNVLNEMSVMGIHPNLVIHRVLLNASSKSGKANAVLQMHEQL 683
Query: 550 RSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKG-CAQNH 608
G++++ Y L+ + T A + K M + + L++G C +H
Sbjct: 684 VDMGLKINQEAYNNLIVVFCRLRMTKKATSVLKYMIRDGFV-ADTVTYNALIRGYCESSH 742
Query: 609 EAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTF 668
+A Q + EG + + +N ++ LM + ++ +M+ G P+A T+
Sbjct: 743 VKKALATYTQMLNEG--VSPNIVTYNLLLGGLLGAGLMAERDELFDKMKENGLNPDASTY 800
Query: 669 HSMVTGYAAIGGKYTEVTELWGEM--KSFASSTSMNFDEELLDSVLYTFVRGGFFARANE 726
++++GY IG K E L+ EM + F TS + ++ F + G +A E
Sbjct: 801 DTLISGYGKIGNK-KESIRLYCEMVAQGFVPKTST------YNVLISDFAKVGKMDQARE 853
Query: 727 VVAMME 732
++ M+
Sbjct: 854 LLNEMQ 859
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 53/248 (21%), Positives = 107/248 (43%), Gaps = 6/248 (2%)
Query: 447 LQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQ 506
L P Y L+ + + G + + L E E ++ + +I G LD+
Sbjct: 374 LIPNSITYTALIDGYCKVGDMERVESLL--QEMEEKHINPNVITYSSIINGYTKKGILDE 431
Query: 507 AHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQ 566
A +++ +M + ++ VYA L+ Y +A + T L + + +G++++ ++ L+
Sbjct: 432 AINVMKKMLDQNIIPNAYVYAILIDGYCKAGKQEIATDLYNEMKLSGLKVNNVLFDVLVN 491
Query: 567 SKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRI 626
+ K A L K++ + H + L+ G + + +++E+ E + I
Sbjct: 492 NLKRGKRMDEAEELLKDVTSRGLLLD-HVNYTSLMDGFFKAGKESAALNMVEEMTE-KSI 549
Query: 627 DCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVT 686
V +N +I+ + +A+ M +G PN T++ M+ Y G+
Sbjct: 550 PFDVVTYNVLINGLLEHG-KYEAKSVYSGMIEMGLAPNQATYNIMIKAYCK-QGELDNAL 607
Query: 687 ELWGEMKS 694
ELW EMKS
Sbjct: 608 ELWNEMKS 615
Score = 40.0 bits (92), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 51/252 (20%), Positives = 90/252 (35%), Gaps = 22/252 (8%)
Query: 481 NLQVSHDDAALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPR 540
N+ V D VI G ++QA L M + L+K + +
Sbjct: 70 NVDVEVDTVTYNTVIWGFCQHGLVNQAFGFLSIMVKKDTCFDTITCNILVKGFCRIGLAK 129
Query: 541 EVTALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEML 600
++ + S G D + L+ + AL L + M++ + S + L
Sbjct: 130 YGERIMDNLVSGGTCKDVIGFNTLIDGYCKAGEMSLALDLVERMRKEGL-LSDIVSYNTL 188
Query: 601 VKGCAQNHEAGLMAKLLQEVKEGQRIDCGVH--------------------DWNNVIHFF 640
+ G + E LL E+ E + + V + +I +
Sbjct: 189 INGFCKRGEYDKAKSLLHEISESRGVKDSVFFNIDDRIKKDDNLNLEADLITYTTIISTY 248
Query: 641 CKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEMKSFASSTS 700
CK+ +++A + M G LP+ T+ S+V G G+ +E EL EMK +
Sbjct: 249 CKQHGLEEARALYEEMIINGFLPDVVTYSSIVNGLCK-DGRLSEAQELLREMKKMGVDPN 307
Query: 701 MNFDEELLDSVL 712
L+DS+
Sbjct: 308 HVAYTTLIDSLF 319
>gi|119638441|gb|ABL85032.1| auxin efflux carrier [Brachypodium sylvaticum]
Length = 895
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 66/308 (21%), Positives = 137/308 (44%), Gaps = 11/308 (3%)
Query: 447 LQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQ 506
L P Y L+ + + KE L + L+ + G ++ + G +
Sbjct: 309 LSPDAFTYGALMNGLCKGSRLKEAKALLDEMSCSGLK--PNIVVYGTLVDGFMKEGKTAE 366
Query: 507 AHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQ 566
A D+L EM AGV+ + +Y +L++ + + + LL++ G++ D Y L+Q
Sbjct: 367 AFDILKEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLKEMIKVGLRPDTFTYNPLMQ 426
Query: 567 SKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQE-VKEGQR 625
Q D GA L EM+ S I + + + +++ G QN E+ LL+E + EG +
Sbjct: 427 GHFQQHDKDGAFELLNEMRNSGILPNVYS-YGIMINGLCQNGESKEAGNLLEEMISEGLK 485
Query: 626 IDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEV 685
+ + + +I K+ + A +AL++M P+ ++S++ G + + G+ E
Sbjct: 486 PNAFM--YAPLIIGHSKEGNISLACEALEKMTKANVHPDLFCYNSLIKGLSTV-GRMEEA 542
Query: 686 TELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFIDKYKYRT 745
E + +++ + DE +++ + + G +A++++ M + + Y
Sbjct: 543 EEYYAQVQ----KRGLVPDEFTYSGLIHGYCKTGNLEKADQLLRQMLNSGLKPNADTYTD 598
Query: 746 LFLKYHKT 753
L Y K+
Sbjct: 599 LLEGYFKS 606
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 70/304 (23%), Positives = 132/304 (43%), Gaps = 9/304 (2%)
Query: 450 TEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQAHD 509
E Y ++ +G +E F K E + +S D G ++ L +A
Sbjct: 277 NEVTYNVMISGLCRSGAVEE--AFGFKEEMVDYGLSPDAFTYGALMNGLCKGSRLKEAKA 334
Query: 510 LLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKI 569
LLDEM +G++ + VY +L+ +++ + E +L++ SAG+Q + Y+ L++
Sbjct: 335 LLDEMSCSGLKPNIVVYGTLVDGFMKEGKTAEAFDILKEMISAGVQPNKIMYDNLIRGLC 394
Query: 570 VQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRIDCG 629
A L KEM + + R + L++G Q H+ +LL E++ I
Sbjct: 395 KIGQLGRASKLLKEMIKVGL-RPDTFTYNPLMQGHFQQHDKDGAFELLNEMRN-SGILPN 452
Query: 630 VHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELW 689
V+ + +I+ C+ ++A L+ M S G PNA + ++ G++ G L
Sbjct: 453 VYSYGIMINGLCQNGESKEAGNLLEEMISEGLKPNAFMYAPLIIGHSKEGN-----ISLA 507
Query: 690 GEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFIDKYKYRTLFLK 749
E + +++ D +S++ G A E A +++ + D++ Y L
Sbjct: 508 CEALEKMTKANVHPDLFCYNSLIKGLSTVGRMEEAEEYYAQVQKRGLVPDEFTYSGLIHG 567
Query: 750 YHKT 753
Y KT
Sbjct: 568 YCKT 571
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 94/471 (19%), Positives = 198/471 (42%), Gaps = 45/471 (9%)
Query: 248 AMKPNTNTFNIALAGCLLFETTRKAEQLLDIMPRIGVKADSNLLIIMAHIYERNGRREE- 306
+ P+ T+ + G ++A+ LLD M G+K + + + + + G+ E
Sbjct: 308 GLSPDAFTYGALMNGLCKGSRLKEAKALLDEMSCSGLKPNIVVYGTLVDGFMKEGKTAEA 367
Query: 307 LRKLQRHIDEAVNLSDIQFRQFYNCLLSCHLKFGDLNSASKMVLEMLQRAKEARNSLAAA 366
L+ I V + I Y+ L+ K G L ASK++ EM++ L
Sbjct: 368 FDILKEMISAGVQPNKI----MYDNLIRGLCKIGQLGRASKLLKEMIKVG------LRPD 417
Query: 367 MLPFNAVGVNNRTPSEQNVNCTNSVDLENSGIIENHILSY-------------------- 406
+N + + +++ ++ NSGI+ N + SY
Sbjct: 418 TFTYNPLMQGHFQQHDKDGAFELLNEMRNSGILPN-VYSYGIMINGLCQNGESKEAGNLL 476
Query: 407 ----EDFTKDRKFVALEAEVKRVLQTLLGMLQKQVELITTEHGILQPTEKIYIKLVKAFL 462
+ K F+ + + + + + +E +T + + P Y L+K
Sbjct: 477 EEMISEGLKPNAFMYAPLIIGHSKEGNISLACEALEKMTKAN--VHPDLFCYNSLIKGLS 534
Query: 463 EAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQAHDLLDEMHLAGVRAS 522
G+ +E + + +K L V + G + C + G L++A LL +M +G++ +
Sbjct: 535 TVGRMEEAEEYYAQVQKRGL-VPDEFTYSGLIHGYCKT-GNLEKADQLLRQMLNSGLKPN 592
Query: 523 SSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFK 582
+ Y LL+ Y ++N +V+++L+ +G + D Y ++++ ++ A +
Sbjct: 593 ADTYTDLLEGYFKSNDYEKVSSILQSMLGSGDKPDNHIYGIVIRNLSRSENMEVAFMVLT 652
Query: 583 EMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEV-KEGQRIDCGVHDWNNVIHFFC 641
E++++ + H + L+ G + + LL E+ KEG ++ G+ +N +I FC
Sbjct: 653 EVEKNGLVPDLHI-YSSLISGLCKIADMEKAVGLLDEMAKEG--LEPGIVCYNALIDGFC 709
Query: 642 KKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEM 692
+ + A + + G +PN T+ +++ G G T+ +L+ EM
Sbjct: 710 RSGDISRARNVFDSILAKGLVPNCVTYTALIDGNCK-NGDITDAFDLYKEM 759
Score = 65.9 bits (159), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 66/280 (23%), Positives = 115/280 (41%), Gaps = 19/280 (6%)
Query: 421 EVKRVLQTLLGMLQKQVELITTEHGILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKE 480
+V +LQ++LG K P IY +++ L + E+ F++ E E
Sbjct: 611 KVSSILQSMLGSGDK-------------PDNHIYGIVIRN-LSRSENMEVA-FMVLTEVE 655
Query: 481 NLQVSHDDAALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPR 540
+ D +I+ + +++A LLDEM G+ Y +L+ + +
Sbjct: 656 KNGLVPDLHIYSSLISGLCKIADMEKAVGLLDEMAKEGLEPGIVCYNALIDGFCRSGDIS 715
Query: 541 EVTALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEML 600
+ + G+ + Y AL+ D A L+KEM + I + +L
Sbjct: 716 RARNVFDSILAKGLVPNCVTYTALIDGNCKNGDITDAFDLYKEMLDRGIAPDAFV-YNVL 774
Query: 601 VKGCAQNHEAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLG 660
GC+ A L L + R V +N ++H FCK+ +Q+ EK L M
Sbjct: 775 ATGCSD--AADLEQALFLTEEMFNRGYANVSLFNTLVHGFCKRGKLQETEKLLHVMMDRE 832
Query: 661 HLPNAQTFHSMVTGYAAIGGKYTEVTELWGEMKSFASSTS 700
+PNAQT +V+ + GK E ++ E++ +S S
Sbjct: 833 IVPNAQTVEKVVSEFGK-AGKLGEAHRVFAELQQKKASQS 871
>gi|449442579|ref|XP_004139059.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g01110-like [Cucumis sativus]
Length = 749
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 89/435 (20%), Positives = 165/435 (37%), Gaps = 70/435 (16%)
Query: 247 IAMKPNTNTFNIALAGCLLFETTRKAEQLLDIMPRIGVKADSNLLIIMAHIYERNGRREE 306
+ + PN T+N L + +A+++ D M R GV D + + RNG
Sbjct: 356 LGLTPNAATYNTLLVEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNG---H 412
Query: 307 LRKLQRHIDEAVNLSDIQFRQFYNCLLSCHLKFGDLNSASKMVLEMLQRAKEARNSLAAA 366
L + H E + Y L+ + G L+ A KM EML R
Sbjct: 413 LYQALMHFREMERSGIVPDNVIYTILIDGFCRNGALSDALKMRDEMLARG---------- 462
Query: 367 MLPFNAVGVNNRTPSEQNVNCTNSVDLENSGIIENHIL-SYEDFTKDRKFVALEAEVKRV 425
+ V N D+ + ++E ++ + FT + + + +
Sbjct: 463 -CFMDVVTYNTFLNGLCKKKMFADADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKA 521
Query: 426 LQTLLGMLQKQVELITTEHGILQPTEKIYIKLVKAFLEAG---KTKELTHFLIKAEKENL 482
L M++ L+P + Y L+ F +AG + KEL +I+ +
Sbjct: 522 LNLFEAMVRTN----------LKPDKVTYNTLIDGFCKAGEMGRAKELWDDMIRKD---- 567
Query: 483 QVSHDDAALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREV 542
+ D + G V+ S G L +A +L D+M G+R + +L+K Y + +
Sbjct: 568 -IIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNLVTCNTLIKGYCRSGDMPKA 626
Query: 543 TALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVK 602
L S GI D+ Y L+ + + + A L EM++ + +F ++
Sbjct: 627 YEYLSKMISNGIIPDSFSYNTLIDGYLKEANLEKAFILINEMEKRGL------QFNIIT- 679
Query: 603 GCAQNHEAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHL 662
+N +++ FC + MQ+AE+ L++M +G
Sbjct: 680 ------------------------------YNLILNGFCAEGKMQEAEQVLRKMIEIGIN 709
Query: 663 PNAQTFHSMVTGYAA 677
P+ T+ S++ G+ +
Sbjct: 710 PDGATYSSLINGHVS 724
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 59/251 (23%), Positives = 108/251 (43%), Gaps = 10/251 (3%)
Query: 497 LCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQL 556
LC +G D+A D+L EM G+ +++ Y +LL + E + + G+
Sbjct: 337 LC-KIGKYDRAKDVLIEMLQLGLTPNAATYNTLLVEICRRDNILEAQEIFDEMSRRGVLP 395
Query: 557 DASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKL 616
D + +L+ AL F+EM+ S I + + +L+ G +N K+
Sbjct: 396 DLVSFSSLIGVLARNGHLYQALMHFREMERSGIV-PDNVIYTILIDGFCRNGALSDALKM 454
Query: 617 LQE-VKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGY 675
E + G +D V +N ++ CKK++ DA+ M G +P+ TF +++ GY
Sbjct: 455 RDEMLARGCFMD--VVTYNTFLNGLCKKKMFADADMLFNEMVERGMVPDFYTFTTLIRGY 512
Query: 676 AAIGGKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGK 735
G + L+ M T++ D+ ++++ F + G RA E+ M
Sbjct: 513 CK-DGNMDKALNLFEAM----VRTNLKPDKVTYNTLIDGFCKAGEMGRAKELWDDMIRKD 567
Query: 736 MFIDKYKYRTL 746
+ D Y T+
Sbjct: 568 IIPDHISYGTV 578
Score = 44.3 bits (103), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 34/168 (20%), Positives = 79/168 (47%), Gaps = 3/168 (1%)
Query: 525 VYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEM 584
+Y L++ Y++A + RE + + R G+ + + LL + A ++ E+
Sbjct: 189 IYDLLVRTYVQAKKLREGSEAFQILRRKGVSVSINACNKLLGGLVRTGWVDLAWEIYGEV 248
Query: 585 KESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKR 644
I + + ++V ++ + + L ++ EG+ + + +N +I+ +C++
Sbjct: 249 VRGGIELNVYT-LNIMVNALCKDRKFENVMFFLSDM-EGKGVFADIVTYNTLINAYCREG 306
Query: 645 LMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEM 692
L+++A + L S G P T+++++ G I GKY ++ EM
Sbjct: 307 LVEEAFQLLNSFSSRGMEPGLLTYNAILYGLCKI-GKYDRAKDVLIEM 353
Score = 43.1 bits (100), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 55/275 (20%), Positives = 108/275 (39%), Gaps = 21/275 (7%)
Query: 502 GWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCY 561
G L A + DEM G Y + L + + L + G+ D +
Sbjct: 446 GALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFADADMLFNEMVERGMVPDFYTF 505
Query: 562 EALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVK 621
L++ + AL+LF+ M + + + + L+ G + E G +L ++
Sbjct: 506 TTLIRGYCKDGNMDKALNLFEAMVRTNL-KPDKVTYNTLIDGFCKAGEMGRAKELWDDMI 564
Query: 622 EGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGK 681
I + + V++ FC L+ +A +M G PN T ++++ GY
Sbjct: 565 RKDIIPDHI-SYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNLVTCNTLIKGYCR---- 619
Query: 682 YTEVTELWGEM-KSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFIDK 740
G+M K++ + M + + DS Y + G+ AN +E+ + I++
Sbjct: 620 -------SGDMPKAYEYLSKMISNGIIPDSFSYNTLIDGYLKEAN-----LEKAFILINE 667
Query: 741 YKYRTLFLKYHKTLYKGKTPKFQTEAQLKKREAAL 775
+ R L+++ Y F E ++++ E L
Sbjct: 668 MEKRG--LQFNIITYNLILNGFCAEGKMQEAEQVL 700
>gi|414888270|tpg|DAA64284.1| TPA: hypothetical protein ZEAMMB73_921256 [Zea mays]
Length = 890
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 66/272 (24%), Positives = 113/272 (41%), Gaps = 21/272 (7%)
Query: 464 AGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQAHDLLDEMHLAGVRASS 523
A +++ L H +++A VS D + H++ S G L +A +L EM G A +
Sbjct: 289 ADQSEMLLHTMLEA-----GVSPDTVSYRHIVDAFASAGNLSRAAELFSEMAATGHTADA 343
Query: 524 SVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKE 583
S Y L++A+ + A+LR ++ G A+ Y LL Q G LF+E
Sbjct: 344 SAYLGLMEAHTRVGATADAVAVLRQMQADGCAPTAATYRVLLDLYGRQGRFDGVRQLFRE 403
Query: 584 MKESKIPRSGHQE--FEMLVKGCAQNHEAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFC 641
M+ + P + F + G L +L+ + + C NV+
Sbjct: 404 MRTAVPPDTATYNVLFRVFGDGGFFKEVVELFHDMLKTGVQPDMVTC-----ENVMAACG 458
Query: 642 KKRLMQDAEKALKRMRSLGHLPNAQTFHSMVT--GYAAIGGKYTEVTELWGEMKSFASST 699
L DA + L+ M G +P A + +V G+AA+ Y E + M S
Sbjct: 459 HGGLHGDAREVLEYMTREGMVPTADAYTGLVEALGHAAM---YEEAYVAFNMMTEIGSLP 515
Query: 700 SMNFDEELLDSVLYTFVRGGFFARANEVVAMM 731
++ E +++ + + RGG F A + + M
Sbjct: 516 TL----ETYNALAFAYARGGLFQEAEAIFSRM 543
>gi|414888267|tpg|DAA64281.1| TPA: hypothetical protein ZEAMMB73_921256 [Zea mays]
Length = 873
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 66/272 (24%), Positives = 113/272 (41%), Gaps = 21/272 (7%)
Query: 464 AGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQAHDLLDEMHLAGVRASS 523
A +++ L H +++A VS D + H++ S G L +A +L EM G A +
Sbjct: 267 ADQSEMLLHTMLEA-----GVSPDTVSYRHIVDAFASAGNLSRAAELFSEMAATGHTADA 321
Query: 524 SVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKE 583
S Y L++A+ + A+LR ++ G A+ Y LL Q G LF+E
Sbjct: 322 SAYLGLMEAHTRVGATADAVAVLRQMQADGCAPTAATYRVLLDLYGRQGRFDGVRQLFRE 381
Query: 584 MKESKIPRSGHQE--FEMLVKGCAQNHEAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFC 641
M+ + P + F + G L +L+ + + C NV+
Sbjct: 382 MRTAVPPDTATYNVLFRVFGDGGFFKEVVELFHDMLKTGVQPDMVTC-----ENVMAACG 436
Query: 642 KKRLMQDAEKALKRMRSLGHLPNAQTFHSMVT--GYAAIGGKYTEVTELWGEMKSFASST 699
L DA + L+ M G +P A + +V G+AA+ Y E + M S
Sbjct: 437 HGGLHGDAREVLEYMTREGMVPTADAYTGLVEALGHAAM---YEEAYVAFNMMTEIGSLP 493
Query: 700 SMNFDEELLDSVLYTFVRGGFFARANEVVAMM 731
++ E +++ + + RGG F A + + M
Sbjct: 494 TL----ETYNALAFAYARGGLFQEAEAIFSRM 521
>gi|297809453|ref|XP_002872610.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297318447|gb|EFH48869.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 575
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 107/241 (44%), Gaps = 7/241 (2%)
Query: 443 EHGILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVIT-LCISL 501
EHG+ P Y ++ + G+TK+ F + E VS + +I LC +
Sbjct: 261 EHGVF-PNLYTYNCVMNQLCKDGRTKD--AFKVFDEMRERGVSCNIVTYNTLIGGLCREM 317
Query: 502 GWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCY 561
++A+ ++D+M + + Y +L+ + + + +L RD +S G+ Y
Sbjct: 318 K-ANEANKVMDQMKSYVINPNLITYNTLIDGFCSVGKLGKALSLCRDLKSRGLSPSLVTY 376
Query: 562 EALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVK 621
L+ + DT GA + KEM+E I S + +L+ A++ +L ++
Sbjct: 377 NVLVSGFCRKGDTSGAAKMVKEMEERGIKPS-KVTYTILIDTFARSDNMETAIQLRSSME 435
Query: 622 EGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGK 681
E + VH ++ +IH FC K M +A + K M PN +++M+ GY G
Sbjct: 436 ELGLVP-DVHTYSVLIHGFCIKGQMNEASRLFKSMVEKMLEPNEVIYNTMILGYCKEGSS 494
Query: 682 Y 682
Y
Sbjct: 495 Y 495
Score = 45.4 bits (106), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 80/420 (19%), Positives = 154/420 (36%), Gaps = 68/420 (16%)
Query: 248 AMKPNTNTFNIALAGCLLFETTRKAEQLLDIMPRIGVKADSNLLIIMAHIYERNGRREEL 307
PN + + GC KA+ L M + G+ A+ ++ H +NG +++
Sbjct: 193 GFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQG 252
Query: 308 RKLQRHIDEAVNLSDIQFRQFYNCLLSCHLKFGDLNSASKMVLEMLQRAKEARNSLAAAM 367
++ + E ++ YNC+++ K G A K+ EM +R ++ +
Sbjct: 253 FEMYEKMQEHGVFPNLYT---YNCVMNQLCKDGRTKDAFKVFDEMRERG------VSCNI 303
Query: 368 LPFNA-VGVNNRTPSEQNVNCTNSV-DLENSGIIENHILSYEDFTKDRKFVALEAEVKRV 425
+ +N +G R E N N V D S +I ++++Y F ++
Sbjct: 304 VTYNTLIGGLCR---EMKANEANKVMDQMKSYVINPNLITYNTLIDG--FCSV------- 351
Query: 426 LQTLLGMLQKQVELITT-EHGILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQV 484
G L K + L + L P+ Y LV F G T
Sbjct: 352 -----GKLGKALSLCRDLKSRGLSPSLVTYNVLVSGFCRKGDT----------------- 389
Query: 485 SHDDAALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTA 544
A ++ EM G++ S Y L+ + ++
Sbjct: 390 --------------------SGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMETAIQ 429
Query: 545 LLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGC 604
L G+ D Y L+ ++ A LFK M E K+ + ++ G
Sbjct: 430 LRSSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVE-KMLEPNEVIYNTMILGY 488
Query: 605 AQNHEAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPN 664
+ + +L ++++E + + V ++ +I CK+R +++AE +++M G P+
Sbjct: 489 CKEGSSYRALRLFRDMEE-KELAPNVASYSYLIRVLCKERKLKEAEDLVEKMIDSGIDPS 547
>gi|449532420|ref|XP_004173179.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g05670, mitochondrial-like [Cucumis sativus]
Length = 748
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/230 (23%), Positives = 104/230 (45%), Gaps = 4/230 (1%)
Query: 447 LQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQ 506
L+P E Y L+ + +AG+ + F + E + ++ + G +I G LD
Sbjct: 429 LKPDEVTYTTLIDVYCKAGEM--VNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDT 486
Query: 507 AHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQ 566
A++LLDEM G++ + +Y S++ +A + L+++ AGI DA Y ++
Sbjct: 487 ANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVID 546
Query: 567 SKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRI 626
+ D A L +EM + + + F +L+ G +LL + E +
Sbjct: 547 AYCRLGDIDKAHKLLQEMLDRGL-QPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIV 605
Query: 627 DCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYA 676
+ +N ++ C + M K KRMR+ G P++ T++ ++ G+
Sbjct: 606 PDAI-TYNTLMKQHCIRNSMNTTTKIYKRMRNQGVAPDSNTYNILIKGHC 654
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 69/312 (22%), Positives = 125/312 (40%), Gaps = 12/312 (3%)
Query: 440 ITTEHGILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCI 499
+ E+GI T Y ++ + GK KE L++ + + + D + VI
Sbjct: 248 VFCEYGISWNTTS-YNIIIYSLCRLGKVKEAHRLLMQMDFRS--STPDVVSYSTVIDGYC 304
Query: 500 SLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDAS 559
LG L +A L+D+M + G++ + Y S++ + + E +LR+ S I D
Sbjct: 305 HLGELKKALKLMDDMQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQKIIPDNV 364
Query: 560 CYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQE 619
Y L+ A F EM KI + + L++G Q + L E
Sbjct: 365 VYTTLIHGFFKLGHVRTANKWFDEMLSKKIS-PDYITYTTLIQGFGQGGKVIEPQNLFHE 423
Query: 620 -VKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAI 678
+ G + D + +I +CK M +A M +G PN T+ +++ G
Sbjct: 424 MISRGLKPD--EVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCK- 480
Query: 679 GGKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFI 738
G+ EL EM+ + + + +S++ + G +A +++ ME +
Sbjct: 481 HGELDTANELLDEMR----KKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDP 536
Query: 739 DKYKYRTLFLKY 750
D Y T+ Y
Sbjct: 537 DAITYTTVIDAY 548
>gi|414888268|tpg|DAA64282.1| TPA: hypothetical protein ZEAMMB73_921256 [Zea mays]
Length = 868
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 66/272 (24%), Positives = 113/272 (41%), Gaps = 21/272 (7%)
Query: 464 AGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQAHDLLDEMHLAGVRASS 523
A +++ L H +++A VS D + H++ S G L +A +L EM G A +
Sbjct: 267 ADQSEMLLHTMLEA-----GVSPDTVSYRHIVDAFASAGNLSRAAELFSEMAATGHTADA 321
Query: 524 SVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKE 583
S Y L++A+ + A+LR ++ G A+ Y LL Q G LF+E
Sbjct: 322 SAYLGLMEAHTRVGATADAVAVLRQMQADGCAPTAATYRVLLDLYGRQGRFDGVRQLFRE 381
Query: 584 MKESKIPRSGHQE--FEMLVKGCAQNHEAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFC 641
M+ + P + F + G L +L+ + + C NV+
Sbjct: 382 MRTAVPPDTATYNVLFRVFGDGGFFKEVVELFHDMLKTGVQPDMVTC-----ENVMAACG 436
Query: 642 KKRLMQDAEKALKRMRSLGHLPNAQTFHSMVT--GYAAIGGKYTEVTELWGEMKSFASST 699
L DA + L+ M G +P A + +V G+AA+ Y E + M S
Sbjct: 437 HGGLHGDAREVLEYMTREGMVPTADAYTGLVEALGHAAM---YEEAYVAFNMMTEIGSLP 493
Query: 700 SMNFDEELLDSVLYTFVRGGFFARANEVVAMM 731
++ E +++ + + RGG F A + + M
Sbjct: 494 TL----ETYNALAFAYARGGLFQEAEAIFSRM 521
>gi|168062855|ref|XP_001783392.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162665090|gb|EDQ51786.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 540
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 76/341 (22%), Positives = 139/341 (40%), Gaps = 48/341 (14%)
Query: 449 PTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQAH 508
P IY L+ + + G + + + + E L D V++ C +G +D+ +
Sbjct: 92 PDIVIYNILILEYGKRGNFSQAMKYFSQLKDEGLL--PDSGTYCAVLSACRKVGNIDKGN 149
Query: 509 DLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALL--- 565
+ L EM AG++ Y+ L+ + +A R + A R+ + +G D+ Y L+
Sbjct: 150 ETLKEMREAGIKPDQVAYSILIDMFGKAGRHEDAAATFRELQMSGYLPDSVAYNTLIHAF 209
Query: 566 -------QSKIVQK--------DTP-----------------GALHLFKEMKESKIPRSG 593
Q+ +V K D P ALH+ K MKE + +
Sbjct: 210 AKVGMVDQATLVFKEAQRSFCLDDPVIFYTMIQVYAKARMADQALHVLKLMKEIGLQPNE 269
Query: 594 HQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRIDC--GVHDWNNVIHFFCKKRLMQDAEK 651
+L N G + KL +E++E +C G + +++ + K AE+
Sbjct: 270 LGYGSVLNAFMRANQPMGAI-KLFEEMQES---NCRFGESTYITMLNVYSKAGFHSAAEE 325
Query: 652 ALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEMKSFASSTSMNFDEELLDSV 711
L +MR LG N + +++ Y + GK E T L+ MK ++ +LD
Sbjct: 326 LLAKMRQLGFRRNVVAYSTLIDMYGKV-GKLQEATRLFSTMKQQGCKGNLIVYNTMLD-- 382
Query: 712 LYTFVRGGFFARANEVVAMMEEGKMFIDKYKYRTLFLKYHK 752
+ + G A ++A +++ K+ D Y TL Y++
Sbjct: 383 --MYGKAGRINDAERLMAELKDSKLVPDTVTYTTLINAYNR 421
>gi|358347154|ref|XP_003637626.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355503561|gb|AES84764.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 989
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 69/275 (25%), Positives = 108/275 (39%), Gaps = 40/275 (14%)
Query: 447 LQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQ 506
L P Y L+ + + GK + L K EKE V + +I G L +
Sbjct: 457 LAPNCVTYSALLDGYCKLGKMELAELVLQKMEKE--HVPPNVITFSSIINGYAKKGMLSK 514
Query: 507 AHDLLDEMHLAGVRASSSVYASLLKAYIEAN----------------------------- 537
A D+L EM V ++ VYA L+ Y +A
Sbjct: 515 AVDVLREMVQRNVMPNTIVYAILIDGYFKAGEQDVADDFCKEMKSRRLEESNVIFDILLN 574
Query: 538 ------RPREVTALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPR 591
R E +L+ D S GI D Y +L+ + + AL + +EMKE I R
Sbjct: 575 NLKRVGRMDEARSLIIDMYSKGIDPDIVNYASLIDGYFKEGNQLAALSIVQEMKEKNI-R 633
Query: 592 SGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEK 651
+ L+KG + + + ++ G DC +N +I+ +C K +DA
Sbjct: 634 FDVVAYNALIKGLLRLGKYDPRYVCSRMIELGLAPDC--ITYNTIINTYCIKGKTEDALD 691
Query: 652 ALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVT 686
L M+S G +PNA T++ ++ G G T +T
Sbjct: 692 ILNEMKSYGIMPNAVTYNILIGGLCKTGFVPTPIT 726
Score = 45.4 bits (106), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 67/307 (21%), Positives = 121/307 (39%), Gaps = 11/307 (3%)
Query: 447 LQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQ 506
LQPT Y L+ A+ + +E +H L K N + D ++ G L +
Sbjct: 317 LQPTLVTYTTLIAAYCKFVGVEE-SHSLYKKMIMN-GIMPDVVTCSSILYGFCRHGKLTE 374
Query: 507 AHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQ 566
A L EM+ G+ + YA+++ + ++ R E L GI D ++
Sbjct: 375 AAVLFREMYEMGLDPNHVSYATIINSLFKSGRVMEAFNLQSQMVVRGISFDIVTCTTVMD 434
Query: 567 SKIVQKDTPGALHLFKE-MKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQR 625
T A +F+ +K + P + L+ G + + L +LQ++ E +
Sbjct: 435 GLFKVGKTKEAEEVFETILKLNLAPNC--VTYSALLDGYCKLGKMELAELVLQKM-EKEH 491
Query: 626 IDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEV 685
+ V ++++I+ + KK ++ A L+ M +PN + ++ GY G+
Sbjct: 492 VPPNVITFSSIINGYAKKGMLSKAVDVLREMVQRNVMPNTIVYAILIDGYFK-AGEQDVA 550
Query: 686 TELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFIDKYKYRT 745
+ EMKS S + D +L R G A ++ M + D Y +
Sbjct: 551 DDFCKEMKSRRLEES----NVIFDILLNNLKRVGRMDEARSLIIDMYSKGIDPDIVNYAS 606
Query: 746 LFLKYHK 752
L Y K
Sbjct: 607 LIDGYFK 613
Score = 41.6 bits (96), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 101/463 (21%), Positives = 176/463 (38%), Gaps = 45/463 (9%)
Query: 227 IGYLFQDGRVDPRKKCNAPLI--AMKPNTNTFNIALAGCLLFETTRKAEQLLDIMPRIGV 284
I LF+ GRV + ++ + + T + G T++AE++ + + ++ +
Sbjct: 398 INSLFKSGRVMEAFNLQSQMVVRGISFDIVTCTTVMDGLFKVGKTKEAEEVFETILKLNL 457
Query: 285 KADSNLLIIMAHIYERNGRRE--ELRKLQRHIDEAVNLSDIQFRQFYNCLLSCHLKFGDL 342
+ + Y + G+ E EL LQ+ E V + I F N + K G L
Sbjct: 458 APNCVTYSALLDGYCKLGKMELAEL-VLQKMEKEHVPPNVITFSSIING----YAKKGML 512
Query: 343 NSASKMVLEMLQRAKEARNSLAAAMLPFNAVGVNNRTPSEQNVNCTNSVDLENSGIIENH 402
+ A ++ EM+QR N++ A+L + ++ S LE S +I
Sbjct: 513 SKAVDVLREMVQR-NVMPNTIVYAILIDGYFKAGEQDVADDFCKEMKSRRLEESNVI--- 568
Query: 403 ILSYEDFTKDRKFVALEAEVKRVLQTLLGMLQKQVELITTEH--GILQPTEKIYIKLVKA 460
F L +KRV G + + LI + GI P Y L+
Sbjct: 569 ------------FDILLNNLKRV-----GRMDEARSLIIDMYSKGI-DPDIVNYASLIDG 610
Query: 461 FLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQAHDLLDEMHLAGVR 520
+ + G +L I E + + D A +I + LG D + + M G+
Sbjct: 611 YFKEGN--QLAALSIVQEMKEKNIRFDVVAYNALIKGLLRLGKYDPRY-VCSRMIELGLA 667
Query: 521 ASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQKDTPGAL-- 578
Y +++ Y + + +L + +S GI +A Y L+ P +
Sbjct: 668 PDCITYNTIINTYCIKGKTEDALDILNEMKSYGIMPNAVTYNILIGGLCKTGFVPTPITH 727
Query: 579 -HLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQE-VKEGQRIDCGVHDWNNV 636
L K S+ Q E LV A E +L E VK G I + +N +
Sbjct: 728 KFLVKAYSRSEKADKILQIHEKLV---ASGLELKRQKVVLDEMVKRG--ISADLVTYNAL 782
Query: 637 IHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIG 679
I +C ++ A K +M G PN T+++++ G + G
Sbjct: 783 IRGYCTGSHVEKALKTYSQMFVDGIAPNITTYNTLLGGLSNAG 825
>gi|357140697|ref|XP_003571900.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09820-like [Brachypodium distachyon]
Length = 571
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 90/196 (45%), Gaps = 5/196 (2%)
Query: 483 QVSHDDAALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIE---ANRP 539
+VS D VI+ G L +A D+ ++ G+ S Y +++ Y + A R
Sbjct: 180 RVSPDLFTFNIVISGLCKTGQLRKAGDVAKDIRAWGLAPSVVTYNTIIDGYCKRGRAGRM 239
Query: 540 REVTALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEM 599
V ALL++ AGI + + L+ +T A+ +F+EMK+ I S +
Sbjct: 240 YHVDALLKEMVEAGISPNEVTFNVLVNGYCKDSNTAAAVRVFEEMKQQGIAAS-VVTYSA 298
Query: 600 LVKGCAQNHEAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSL 659
LV G + KL+ E+K+ + + N+V++ FCKK +M DAE + M
Sbjct: 299 LVWGLCSEGKVEEGVKLVDEMKDLGLVP-NLATLNSVLNGFCKKGMMTDAEGWIDSMEQK 357
Query: 660 GHLPNAQTFHSMVTGY 675
PN T+ +V GY
Sbjct: 358 NVKPNVVTYTILVDGY 373
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/174 (22%), Positives = 76/174 (43%), Gaps = 5/174 (2%)
Query: 504 LDQAHDLL---DEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASC 560
LD+ D L + M GVR ++ +Y L+ + R V+ LL + R G++ D
Sbjct: 376 LDKMKDALAVKEAMSGKGVRPNARIYNCLIAGFTRNGDWRSVSGLLDEMRMKGVRADIVT 435
Query: 561 YEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEV 620
Y L+ + V+ + A+ L EM + H + ++ G + ++ +
Sbjct: 436 YNVLIGALCVKGEVRKAVKLLDEMLMVGL-EPVHLTYNTIINGYCEKGNIKSAYEIRTRM 494
Query: 621 KEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTG 674
++G++ V +N I C+ M++ + L M G +PN T+ ++ G
Sbjct: 495 EKGKK-RANVVTYNVFIKCLCRMGKMEETNELLNEMLEKGLVPNGVTYDTIKEG 547
Score = 40.0 bits (92), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 70/326 (21%), Positives = 130/326 (39%), Gaps = 21/326 (6%)
Query: 442 TEHGILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDD-AALGHVITLCIS 500
E GI P E + LV + + T + +++ + S +AL V LC S
Sbjct: 250 VEAGI-SPNEVTFNVLVNGYCKDSNTAAAVRVFEEMKQQGIAASVVTYSAL--VWGLC-S 305
Query: 501 LGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASC 560
G +++ L+DEM G+ + + S+L + + + + ++ +
Sbjct: 306 EGKVEEGVKLVDEMKDLGLVPNLATLNSVLNGFCKKGMMTDAEGWIDSMEQKNVKPNVVT 365
Query: 561 YEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEV 620
Y L+ AL + KE K R + + L+ G +N + ++ LL E+
Sbjct: 366 YTILVDGYRRLDKMKDALAV-KEAMSGKGVRPNARIYNCLIAGFTRNGDWRSVSGLLDEM 424
Query: 621 K-EGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIG 679
+ +G R D + +N +I C K ++ A K L M +G P T+++++ GY G
Sbjct: 425 RMKGVRAD--IVTYNVLIGALCVKGEVRKAVKLLDEMLMVGLEPVHLTYNTIINGYCEKG 482
Query: 680 GKYT--EVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMF 737
+ E+ + K A+ + N + R G NE++ M E +
Sbjct: 483 NIKSAYEIRTRMEKGKKRANVVTYNV-------FIKCLCRMGKMEETNELLNEMLEKGLV 535
Query: 738 IDKYKYRTLFLKYHKTLYKGKTPKFQ 763
+ Y T+ + KG TP +
Sbjct: 536 PNGVTYDTI---KEGMMEKGYTPDVR 558
>gi|449449677|ref|XP_004142591.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
mitochondrial-like [Cucumis sativus]
Length = 748
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/230 (23%), Positives = 104/230 (45%), Gaps = 4/230 (1%)
Query: 447 LQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQ 506
L+P E Y L+ + +AG+ + F + E + ++ + G +I G LD
Sbjct: 429 LKPDEVTYTTLIDVYCKAGEM--VNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDT 486
Query: 507 AHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQ 566
A++LLDEM G++ + +Y S++ +A + L+++ AGI DA Y ++
Sbjct: 487 ANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVID 546
Query: 567 SKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRI 626
+ D A L +EM + + + F +L+ G +LL + E +
Sbjct: 547 AYCRLGDIDKAHKLLQEMLDRGL-QPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIV 605
Query: 627 DCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYA 676
+ +N ++ C + M K KRMR+ G P++ T++ ++ G+
Sbjct: 606 PDAI-TYNTLMKQHCIRNSMNTTTKIYKRMRNQGVAPDSNTYNILIKGHC 654
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 69/312 (22%), Positives = 125/312 (40%), Gaps = 12/312 (3%)
Query: 440 ITTEHGILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCI 499
+ E+GI T Y ++ + GK KE L++ + + + D + VI
Sbjct: 248 VFCEYGISWNTTS-YNIIIYSLCRLGKVKEAHRLLMQMDFRS--STPDVVSYSTVIDGYC 304
Query: 500 SLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDAS 559
LG L +A L+D+M + G++ + Y S++ + + E +LR+ S I D
Sbjct: 305 HLGELKKALKLMDDMQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQKIIPDNV 364
Query: 560 CYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQE 619
Y L+ A F EM KI + + L++G Q + L E
Sbjct: 365 VYTTLIHGFFKLGHVRTANKWFDEMLSKKIS-PDYITYTTLIQGFGQGGKVIEPQNLFHE 423
Query: 620 -VKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAI 678
+ G + D + +I +CK M +A M +G PN T+ +++ G
Sbjct: 424 MISRGLKPD--EVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCK- 480
Query: 679 GGKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFI 738
G+ EL EM+ + + + +S++ + G +A +++ ME +
Sbjct: 481 HGELDTANELLDEMR----KKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDP 536
Query: 739 DKYKYRTLFLKY 750
D Y T+ Y
Sbjct: 537 DAITYTTVIDAY 548
>gi|168033824|ref|XP_001769414.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162679334|gb|EDQ65783.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 410
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/268 (23%), Positives = 118/268 (44%), Gaps = 12/268 (4%)
Query: 494 VITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAG 553
+I++ G L A ++ + M AGV S Y +LL Y + +E AL + G
Sbjct: 36 IISILGREGKLGLAREIFEGMSKAGVAPSVHAYTALLSGYAKQGLLKEAWALFEAMKEKG 95
Query: 554 IQLDASCYEALLQSKIVQK-DTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGL 612
+ Y L+ + + P + LF+EMK++ + + + +V C
Sbjct: 96 CSPNVLTYNTLINACTKRAYRLPDLVGLFEEMKQAGV-QPNDITYNCMVNACVCLSLFDT 154
Query: 613 MAKLLQEVKEGQRIDC--GVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHS 670
+++L+E+K ++C V + +I+ + + +A + + M+ LG PN+ T++S
Sbjct: 155 ASQILKEMKA---VNCLPNVISYTTMINSLGRSGRLDEAVELFEEMKELGRSPNSWTYNS 211
Query: 671 MVTGYAAIGGKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAM 730
++ YA G+Y + L+ M+ D ++V+ RGG FA A V
Sbjct: 212 LLKAYAR-EGRYEKAMCLFVGMEDEGCIP----DLYTYNTVIDMCGRGGLFAEAEGVFLE 266
Query: 731 MEEGKMFIDKYKYRTLFLKYHKTLYKGK 758
M+ D+ Y T+ Y K +G+
Sbjct: 267 MQRKGCTPDRVTYNTMLDAYSKWSRRGR 294
Score = 45.4 bits (106), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 79/209 (37%), Gaps = 35/209 (16%)
Query: 502 GWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCY 561
G LD+A +L +EM G +S Y SLLKAY R + L G D Y
Sbjct: 185 GRLDEAVELFEEMKELGRSPNSWTYNSLLKAYAREGRYEKAMCLFVGMEDEGCIPDLYTY 244
Query: 562 EALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNH------------- 608
++ D G LF E + + EM KGC +
Sbjct: 245 NTVI-------DMCGRGGLFAEAEGVFL--------EMQRKGCTPDRVTYNTMLDAYSKW 289
Query: 609 -EAGLMAKLLQEVKEGQRIDCGVHDW--NNVIHFFCKKRLMQDAEKALKRMRSLGHLPNA 665
G LL+ +K R C W N ++ K +A + +++ GH PN
Sbjct: 290 SRRGRARDLLKTMK---RAGCTPDLWTYNILLDAAGKAGSASEAMQIFHELKAAGHSPNL 346
Query: 666 QTFHSMVTGYAAIGGKYTEVTELWGEMKS 694
+F +++ Y + G + E W EM++
Sbjct: 347 VSFSALINMYGRL-GYFEEAERAWVEMRA 374
>gi|242046162|ref|XP_002460952.1| hypothetical protein SORBIDRAFT_02g038080 [Sorghum bicolor]
gi|241924329|gb|EER97473.1| hypothetical protein SORBIDRAFT_02g038080 [Sorghum bicolor]
Length = 796
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 81/371 (21%), Positives = 147/371 (39%), Gaps = 47/371 (12%)
Query: 415 FVALEAEVKRV--LQTLLGMLQKQVELITTEHGILQPTEKIYIKLVKAFLEAGKTKELTH 472
+ AL +E R + + + ++ V+ G +QP Y ++ + + +
Sbjct: 188 YTALVSEFSRAGRFRDAVAVFRRMVD------GGVQPALVTYNVVLHVYSKMSVPWKEVV 241
Query: 473 FLIKAEKENLQVSHDDAALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKA 532
L+ + KE+ + D +I+ C G +A + DEM AG + SLL
Sbjct: 242 VLVDSMKED-GIELDRYTYNTLISCCRRRGLYREAAQMFDEMKAAGFEPDKVTFNSLLDV 300
Query: 533 YIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEM-------- 584
Y +A R E +L+ +AG Y +L+ + + AL L +EM
Sbjct: 301 YGKARRHEEAIGVLKKMENAGCTPSVVTYNSLISAYVKDGLLEEALELKQEMEFRGMKPD 360
Query: 585 ------------KESKIPRSGHQEFEMLVKGCAQN---HEA-----GLMAKLLQE--VKE 622
+ KI + EM+ GC+ N + A G+ K + V +
Sbjct: 361 VVTYTTLISGLDRIGKIDAALATYSEMVRNGCSPNLCTYNALIKMHGVRGKFTEMMIVFD 420
Query: 623 GQRIDCGVHD---WNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIG 679
R V D WN ++ F + L + K M+ G++P T+ S+++ Y+
Sbjct: 421 DLRSAGYVPDVVTWNTLLAVFGQNGLDSEVSGVFKEMKKAGYIPERDTYVSLISSYSRC- 479
Query: 680 GKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFID 739
G + + E++ M + D ++VL RGG + +A ++ A ME+ D
Sbjct: 480 GLFDQAMEIYKRM----IEAGIYPDISTYNAVLSALARGGRWVQAEKLFAEMEDRDCKPD 535
Query: 740 KYKYRTLFLKY 750
+ Y +L Y
Sbjct: 536 ELSYSSLLHAY 546
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 98/452 (21%), Positives = 175/452 (38%), Gaps = 44/452 (9%)
Query: 326 RQFYNCLLSCHLKFGDLNSASKMVLEM----LQRAKEARNSL----AAAMLPFNAVGVNN 377
R YN L+SC + G A++M EM + K NSL A A+GV
Sbjct: 256 RYTYNTLISCCRRRGLYREAAQMFDEMKAAGFEPDKVTFNSLLDVYGKARRHEEAIGVLK 315
Query: 378 RTPSEQNVNCTNSVDLENS--------GIIENHILSYEDFTKDRKFVALEAEVKRVLQTL 429
+ +N CT SV NS G++E + + ++ +F ++ +V TL
Sbjct: 316 KM---ENAGCTPSVVTYNSLISAYVKDGLLEEAL----ELKQEMEFRGMKPDVV-TYTTL 367
Query: 430 LGMLQK----QVELITTEHGI---LQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENL 482
+ L + L T + P Y L+K GK E+ ++ + +
Sbjct: 368 ISGLDRIGKIDAALATYSEMVRNGCSPNLCTYNALIKMHGVRGKFTEM--MIVFDDLRSA 425
Query: 483 QVSHDDAALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREV 542
D ++ + G + + EM AG Y SL+ +Y +
Sbjct: 426 GYVPDVVTWNTLLAVFGQNGLDSEVSGVFKEMKKAGYIPERDTYVSLISSYSRCGLFDQA 485
Query: 543 TALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVK 602
+ + AGI D S Y A+L + A LF EM E + + + L+
Sbjct: 486 MEIYKRMIEAGIYPDISTYNAVLSALARGGRWVQAEKLFAEM-EDRDCKPDELSYSSLLH 544
Query: 603 GCAQNHEAGLMAKLLQEVKEGQRIDCGVHDW--NNVIHFFCKKRLMQDAEKALKRMRSLG 660
A + M L +++ QRI+ H+W ++ K + + EKA + +R
Sbjct: 545 AYANAKKLDKMKALSEDIY-AQRIE--PHNWLVKTLVLVNNKVNSLSETEKAFQELRRRR 601
Query: 661 HLPNAQTFHSMVTGYAAIGGKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGF 720
+ ++MV+ Y GK V ++ E+ + S+N +S+++ + R G
Sbjct: 602 CSLDINVLNAMVSIY----GKNKMVKKV-EEVLTLMKENSINHSAATYNSLMHMYSRLGD 656
Query: 721 FARANEVVAMMEEGKMFIDKYKYRTLFLKYHK 752
+ ++ ++ M D+Y Y T+ Y +
Sbjct: 657 CEKCEAILTEIKSSGMRPDRYSYNTVIYAYGR 688
Score = 47.4 bits (111), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 112/586 (19%), Positives = 229/586 (39%), Gaps = 72/586 (12%)
Query: 175 LSKCGLPVPASTILRKLVATEQYPPVTAWSAIL-AHMSLTAPGAYLAAELILEIGYLFQD 233
S+ G A + R++V P + ++ +L + ++ P E+++ + + +D
Sbjct: 195 FSRAGRFRDAVAVFRRMVDGGVQPALVTYNVVLHVYSKMSVPWK----EVVVLVDSMKED 250
Query: 234 GRVDPRKKCNAPLIAMKPNTNTFNIALAGCLLFETTRKAEQLLDIMPRIGVKADSNLLII 293
G ++ + T+N ++ C R+A Q+ D M G + D
Sbjct: 251 G--------------IELDRYTYNTLISCCRRRGLYREAAQMFDEMKAAGFEPDKVTFNS 296
Query: 294 MAHIYERNGRREELRKLQRHIDEAVNLSDIQFRQFYNCLLSCHLKFGDLNSASKMVLEML 353
+ +Y + R EE + + ++ A + YN L+S ++K G L A ++ EM
Sbjct: 297 LLDVYGKARRHEEAIGVLKKMENAGCTPSVVT---YNSLISAYVKDGLLEEALELKQEME 353
Query: 354 QRAKEARNSLAAAMLPFNAVGVNNRTPSEQNVNCTNSVD-LENSGIIENHILSYEDFTKD 412
R M P V T + L+ G I+ + +Y +
Sbjct: 354 FRG----------MKP-------------DVVTYTTLISGLDRIGKIDAALATYSEMV-- 388
Query: 413 RKFVALEAEVKRVLQTLLGMLQKQVELITTEHGILQ----PTEKIYIKLVKAFLEAGKTK 468
R + L + G+ K E++ + P + L+ F + G
Sbjct: 389 RNGCSPNLCTYNALIKMHGVRGKFTEMMIVFDDLRSAGYVPDVVTWNTLLAVFGQNGLDS 448
Query: 469 ELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYAS 528
E++ + +K D +I+ G DQA ++ M AG+ S Y +
Sbjct: 449 EVSGVFKEMKKAGYIPERDTYV--SLISSYSRCGLFDQAMEIYKRMIEAGIYPDISTYNA 506
Query: 529 LLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESK 588
+L A R + L + + D Y +LL + K L +++ +
Sbjct: 507 VLSALARGGRWVQAEKLFAEMEDRDCKPDELSYSSLLHAYANAKKLDKMKALSEDIYAQR 566
Query: 589 IPRSGHQEFEMLVKGCA-QNHEAGLMAKLLQEVKEGQRIDCG--VHDWNNVIHFFCKKRL 645
I + LVK N++ +++ + +E +R C ++ N ++ + K ++
Sbjct: 567 I-----EPHNWLVKTLVLVNNKVNSLSETEKAFQELRRRRCSLDINVLNAMVSIYGKNKM 621
Query: 646 MQDAEKALKRMR--SLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEMKSFASSTSMNF 703
++ E+ L M+ S+ H +A T++S++ Y+ + G + + E+K S+ M
Sbjct: 622 VKKVEEVLTLMKENSINH--SAATYNSLMHMYSRL-GDCEKCEAILTEIK----SSGMRP 674
Query: 704 DEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFIDKYKYRTLFLK 749
D ++V+Y + R G A+ + + M+ + D Y +F+K
Sbjct: 675 DRYSYNTVIYAYGRKGQMKEASRLFSEMKCSGVKPDIVTY-NIFIK 719
Score = 42.7 bits (99), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 77/175 (44%), Gaps = 10/175 (5%)
Query: 523 SSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQ--SKIVQKDTP--GAL 578
+S Y +L+ + A R R+ A+ R G+Q Y +L SK+ P +
Sbjct: 185 ASAYTALVSEFSRAGRFRDAVAVFRRMVDGGVQPALVTYNVVLHVYSKM---SVPWKEVV 241
Query: 579 HLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRIDCGVHDWNNVIH 638
L MKE I + + L+ C + A++ E+K + +N+++
Sbjct: 242 VLVDSMKEDGIELDRYT-YNTLISCCRRRGLYREAAQMFDEMKAAG-FEPDKVTFNSLLD 299
Query: 639 FFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEMK 693
+ K R ++A LK+M + G P+ T++S+++ Y G E EL EM+
Sbjct: 300 VYGKARRHEEAIGVLKKMENAGCTPSVVTYNSLISAYVK-DGLLEEALELKQEME 353
>gi|125548610|gb|EAY94432.1| hypothetical protein OsI_16202 [Oryza sativa Indica Group]
gi|125590647|gb|EAZ30997.1| hypothetical protein OsJ_15079 [Oryza sativa Japonica Group]
Length = 485
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/246 (23%), Positives = 105/246 (42%), Gaps = 9/246 (3%)
Query: 499 ISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDA 558
+ LG L A ++ DEM GVR + + +++ A L R AG+ D
Sbjct: 127 VRLGELASAQNVFDEMQSRGVRRTVVSFNTMISGMCRAGDLDGAETLHRRMSEAGVTPDV 186
Query: 559 SCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQ 618
Y AL+Q A +F++M + + F +L+ + +A M +L +
Sbjct: 187 YTYGALIQGLCRVGRIEDARGVFEKMCGRGM-KPNAVVFTILIDAHCKKGDAETMLELHR 245
Query: 619 EVKE-GQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAA 677
E++E G R D +N +++ C+ R ++ A + MRS G P+ T+ +++ GY
Sbjct: 246 EMRERGVRPD--AVTYNAIVNGLCRARDLKSASGIVVEMRSAGLRPDTVTYTTLIDGYCK 303
Query: 678 IGGKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMF 737
E ++ E+K + + DE +++ + G A A V+ M E +
Sbjct: 304 -----EEELDMAMEIKQNMVAEGVGLDEVTYTALISGLSKAGRSADAERVLGEMMEAGLE 358
Query: 738 IDKYKY 743
D Y
Sbjct: 359 PDNTTY 364
Score = 49.3 bits (116), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 47/230 (20%), Positives = 94/230 (40%), Gaps = 35/230 (15%)
Query: 484 VSHDDAALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVT 543
V+ D G +I +G ++ A + ++M G++ ++ V+ L+ A+ + +
Sbjct: 182 VTPDVYTYGALIQGLCRVGRIEDARGVFEKMCGRGMKPNAVVFTILIDAHCKKGDAETML 241
Query: 544 ALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKG 603
L R+ R G++ DA Y A++ +D A + EM+ + + R + L+ G
Sbjct: 242 ELHREMRERGVRPDAVTYNAIVNGLCRARDLKSASGIVVEMRSAGL-RPDTVTYTTLIDG 300
Query: 604 CAQNHEAGLMAKLLQE-VKEGQRID-----------------------------CGVHDW 633
+ E + ++ Q V EG +D G+
Sbjct: 301 YCKEEELDMAMEIKQNMVAEGVGLDEVTYTALISGLSKAGRSADAERVLGEMMEAGLEPD 360
Query: 634 NN----VIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIG 679
N VI FC+K ++ + LK M++ G P T++ ++ G+ +G
Sbjct: 361 NTTYTMVIDAFCRKGDVKTGLRLLKEMQNKGRKPGVVTYNVIMNGFCKLG 410
Score = 42.0 bits (97), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 47/235 (20%), Positives = 91/235 (38%), Gaps = 10/235 (4%)
Query: 518 GVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQKDTPGA 577
G+R + L+ + A E A AG+ +A + L++ + + A
Sbjct: 79 GIRLEPTSCTGLMSRFPTAP---EACAFYLQLLDAGLPPEAKLFNVLMRDLVRLGELASA 135
Query: 578 LHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRIDCGVHDWNNVI 637
++F EM+ + R+ F ++ G + + L + + E + V+ + +I
Sbjct: 136 QNVFDEMQSRGVRRT-VVSFNTMISGMCRAGDLDGAETLHRRMSEAG-VTPDVYTYGALI 193
Query: 638 HFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEMKSFAS 697
C+ ++DA ++M G PNA F ++ + G T + EL EM+
Sbjct: 194 QGLCRVGRIEDARGVFEKMCGRGMKPNAVVFTILIDAHCKKGDAET-MLELHREMR---- 248
Query: 698 STSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFIDKYKYRTLFLKYHK 752
+ D ++++ R A+ +V M + D Y TL Y K
Sbjct: 249 ERGVRPDAVTYNAIVNGLCRARDLKSASGIVVEMRSAGLRPDTVTYTTLIDGYCK 303
>gi|242061252|ref|XP_002451915.1| hypothetical protein SORBIDRAFT_04g009890 [Sorghum bicolor]
gi|241931746|gb|EES04891.1| hypothetical protein SORBIDRAFT_04g009890 [Sorghum bicolor]
Length = 571
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/240 (23%), Positives = 98/240 (40%), Gaps = 11/240 (4%)
Query: 444 HGILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGW 503
H +P Y +L++ +AG+ E HF + ++E + D + ++I G
Sbjct: 293 HQYCRPDVFTYTELIRGLGKAGRIDEAYHFFYEMQREGCR--PDTIVMNNMINFLGKAGR 350
Query: 504 LDQAHDLLDEMHLAGVRASSSVYASLLKAYIEA-NRPREVTALLRDARSAGIQLDASCYE 562
LD A L EM S Y +++KA E+ +R EV + + +GI + Y
Sbjct: 351 LDDAMKLFQEMGTLRCIPSVVTYNTIIKALFESKSRASEVPSWFERMKESGISPSSFTYS 410
Query: 563 ALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKE 622
L+ A+ L +EM E P + L+ + L +L QE+KE
Sbjct: 411 ILIDGFCKTNRMEKAMMLLEEMDEKGFP-PCPAAYCSLIDALGKAKRYDLACELFQELKE 469
Query: 623 GQRIDCGVHD---WNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIG 679
+CG + +I K + DA M LG P+ ++++++G A G
Sbjct: 470 ----NCGSSSSRVYAVMIKHLGKAGRLDDAINMFDEMNKLGCAPDVYAYNALMSGLARTG 525
Score = 62.8 bits (151), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 60/248 (24%), Positives = 107/248 (43%), Gaps = 16/248 (6%)
Query: 490 ALGHVITLCISLGWLDQAHDLLDEMHLAG-VRASSSVYASLLKAYIEANRPREVTALLRD 548
A +I + + G ++ H+L +EM G + Y++L+ A+ + R LL +
Sbjct: 196 AYNSMIIMLMHEGQYEKVHELYNEMSTEGHCFPDTMTYSALISAFCKLGRRDSAIQLLNE 255
Query: 549 ARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNH 608
+ G+Q Y L+ D GAL LF+EM+ + R + L++G +
Sbjct: 256 MKDNGMQPTTKIYTMLVALFFKLNDVHGALSLFEEMRH-QYCRPDVFTYTELIRGLGKAG 314
Query: 609 EAGLMAKLLQEV-KEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQT 667
E+ +EG R D V NN+I+F K + DA K + M +L +P+ T
Sbjct: 315 RIDEAYHFFYEMQREGCRPDTIV--MNNMINFLGKAGRLDDAMKLFQEMGTLRCIPSVVT 372
Query: 668 FHSMVTGYAAIGGKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFA--RAN 725
+++++ + +EV + MK S S S Y+ + GF R
Sbjct: 373 YNTIIKALFESKSRASEVPSWFERMKESGISPS---------SFTYSILIDGFCKTNRME 423
Query: 726 EVVAMMEE 733
+ + ++EE
Sbjct: 424 KAMMLLEE 431
>gi|255546727|ref|XP_002514422.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223546418|gb|EEF47918.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 809
Score = 67.8 bits (164), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 63/300 (21%), Positives = 120/300 (40%), Gaps = 43/300 (14%)
Query: 494 VITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAG 553
+I +C++ G DQA D+L + G L+ +E+ + A+ R ++ G
Sbjct: 155 LIKVCVASGMFDQAFDVLLQTKHCGFAPQILSCNFLMNRLVESRKVDMAIAIYRQLKAFG 214
Query: 554 IQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLM 613
+ + Y ++ + + A+ +F++M+ES + + + ++G + + L
Sbjct: 215 LNPNDYTYTIAIKGFCRKGNLAEAIDVFRDMEESGVTPNSFS-YTTFIEGLCLHGRSDLG 273
Query: 614 AKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVT 673
K+LQ+V +I V + VI FC + +++AE L+ M G P+ + ++++
Sbjct: 274 FKVLQDVINA-KIPMDVFAYTVVIRGFCSEMKLKEAESILREMEKQGFAPDVYVYCALIS 332
Query: 674 GYAAIG----------------------------------GKYTEVTELWGEMKSFASST 699
GY +G G +EV + E K
Sbjct: 333 GYCMVGNLLKALALHDEMVSKGVKTNCVILSSILQGLSQMGMASEVANQFKEFKKMG--- 389
Query: 700 SMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFIDKYKYRTLFLKYHKTLYKGKT 759
+ FDE + V+ + G A E++ M+ KM D Y T+ Y KGK
Sbjct: 390 -IFFDEACYNVVMDALCKLGKVEEAVELLVEMKGKKMVPDIINYTTVISGY---FLKGKV 445
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 56/242 (23%), Positives = 104/242 (42%), Gaps = 9/242 (3%)
Query: 454 YIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQAHDLLDE 513
Y +++ F K KE L + EK+ + D +I+ +G L +A L DE
Sbjct: 292 YTVVIRGFCSEMKLKEAESILREMEKQGF--APDVYVYCALISGYCMVGNLLKALALHDE 349
Query: 514 MHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQKD 573
M GV+ + + +S+L+ + EV ++ + GI D +CY ++ +
Sbjct: 350 MVSKGVKTNCVILSSILQGLSQMGMASEVANQFKEFKKMGIFFDEACYNVVMDALCKLGK 409
Query: 574 TPGALHLFKEMKESK-IPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKE-GQRIDCGVH 631
A+ L EMK K +P + ++ G + + +E+K+ G + D +
Sbjct: 410 VEEAVELLVEMKGKKMVPDI--INYTTVISGYFLKGKVVDALNIYREMKDIGHKPD--IV 465
Query: 632 DWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGE 691
+N + F + L Q+A L M + G P+ T H+M+ IGGK + +
Sbjct: 466 TYNVLAGGFSRNGLTQEALSLLNYMETQGVKPDTVT-HNMIIEGLCIGGKVDDAQAFFDN 524
Query: 692 MK 693
++
Sbjct: 525 LE 526
Score = 42.4 bits (98), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 50/237 (21%), Positives = 97/237 (40%), Gaps = 5/237 (2%)
Query: 443 EHGILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLG 502
E G+ P Y ++ G++ F + + N ++ D A VI S
Sbjct: 247 ESGV-TPNSFSYTTFIEGLCLHGRSD--LGFKVLQDVINAKIPMDVFAYTVVIRGFCSEM 303
Query: 503 WLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYE 562
L +A +L EM G VY +L+ Y + AL + S G++ +
Sbjct: 304 KLKEAESILREMEKQGFAPDVYVYCALISGYCMVGNLLKALALHDEMVSKGVKTNCVILS 363
Query: 563 ALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKE 622
++LQ + FKE K+ I + +++ + + +LL E+K
Sbjct: 364 SILQGLSQMGMASEVANQFKEFKKMGIFFD-EACYNVVMDALCKLGKVEEAVELLVEMK- 421
Query: 623 GQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIG 679
G+++ + ++ VI + K + DA + M+ +GH P+ T++ + G++ G
Sbjct: 422 GKKMVPDIINYTTVISGYFLKGKVVDALNIYREMKDIGHKPDIVTYNVLAGGFSRNG 478
Score = 39.3 bits (90), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 45/201 (22%), Positives = 78/201 (38%), Gaps = 27/201 (13%)
Query: 494 VITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAG 553
VI G +++A + + + G+ Y ++ Y N+ +E +L D ++ G
Sbjct: 606 VIGALFQAGEMEKAQYVFNMLVDRGLAPDVITYTIMINGYCRMNKMKEAWHVLGDMKNRG 665
Query: 554 IQLDASCYEALLQ--SKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAG 611
I+ D Y LL SKI + + +L K + P +
Sbjct: 666 IEPDVITYTVLLNNCSKIDLRSSSSSLDAMKSKENMMDPSA------------------- 706
Query: 612 LMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSM 671
L E+K+ I V + +I CK +QDA M G P+ T+ ++
Sbjct: 707 ----LWSEMKD-MDIKPDVICYTVLIDKHCKTNNIQDAINLFNEMIDRGLAPDTVTYTAL 761
Query: 672 VTGYAAIGGKYTEVTELWGEM 692
++GY +G V L+ EM
Sbjct: 762 LSGYCNVGNIKKAVV-LFDEM 781
>gi|297837161|ref|XP_002886462.1| binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297332303|gb|EFH62721.1| binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 550
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 62/253 (24%), Positives = 109/253 (43%), Gaps = 13/253 (5%)
Query: 504 LDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEA 563
++ A D E+ G+R + Y +L+ + R + LLRD I + Y A
Sbjct: 206 VNDALDFFKEIGRKGIRPNVVTYTALVNGLCNSGRWNDAARLLRDMIKRKITPNVITYSA 265
Query: 564 LLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKG-CAQNH--EAGLMAKLLQEV 620
LL + + A +F+EM I + L+ G C + EA M L+ V
Sbjct: 266 LLDAFVKNGKVLEAKEIFEEMVRMSID-PDIVTYSSLINGLCLHDRIDEANQMFDLM--V 322
Query: 621 KEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGG 680
+G D V +N +I+ FCK + ++D K ++M G + N T+++++ G+ + G
Sbjct: 323 SKGCFPD--VVSYNTLINGFCKAKRVEDGMKLFRKMSQRGLVNNTVTYNTLIQGFFQV-G 379
Query: 681 KYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFIDK 740
+ E + +M SF S D + +L G +A + M++ +M +D
Sbjct: 380 DVDKAQEFFSQMDSFGVSP----DIWTYNILLGGLCDNGLLEKALVIFEDMQKSEMDLDI 435
Query: 741 YKYRTLFLKYHKT 753
Y T+ KT
Sbjct: 436 VTYTTVIQGMCKT 448
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 59/250 (23%), Positives = 103/250 (41%), Gaps = 11/250 (4%)
Query: 447 LQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVIT-LCISLGWLD 505
+ P Y L+ AF++ GK E I E + + D +I LC+ +D
Sbjct: 256 ITPNVITYSALLDAFVKNGKVLEAKE--IFEEMVRMSIDPDIVTYSSLINGLCLH-DRID 312
Query: 506 QAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALL 565
+A+ + D M G Y +L+ + +A R + L R G+ + Y L+
Sbjct: 313 EANQMFDLMVSKGCFPDVVSYNTLINGFCKAKRVEDGMKLFRKMSQRGLVNNTVTYNTLI 372
Query: 566 QSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQR 625
Q D A F +M + + +L+ G N GL+ K L ++ Q+
Sbjct: 373 QGFFQVGDVDKAQEFFSQMDSFGVS-PDIWTYNILLGGLCDN---GLLEKALVIFEDMQK 428
Query: 626 --IDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYT 683
+D + + VI CK ++DA + G P+ T+ +M++G G ++
Sbjct: 429 SEMDLDIVTYTTVIQGMCKTGKVEDAWGLFCSLSLKGLKPDIVTYTTMMSGLCTKGLQH- 487
Query: 684 EVTELWGEMK 693
EV L+ +MK
Sbjct: 488 EVEALYTKMK 497
Score = 43.9 bits (102), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 42/195 (21%), Positives = 80/195 (41%), Gaps = 2/195 (1%)
Query: 480 ENLQVSHDDAALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRP 539
E L + +D VI + A +L +M G SL+ + NR
Sbjct: 112 EVLGIRNDLYTFNIVINCFCCCFQVSLALSVLGKMLKLGYEPDRVTIGSLVNGFCRRNRV 171
Query: 540 REVTALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEM 599
+ +L+ G + D Y A++ S + AL FKE+ I R +
Sbjct: 172 SDAVSLVDKMVEIGYRPDIVAYNAIIDSLCKTRRVNDALDFFKEIGRKGI-RPNVVTYTA 230
Query: 600 LVKGCAQNHEAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSL 659
LV G + A+LL+++ + ++I V ++ ++ F K + +A++ + M +
Sbjct: 231 LVNGLCNSGRWNDAARLLRDMIK-RKITPNVITYSALLDAFVKNGKVLEAKEIFEEMVRM 289
Query: 660 GHLPNAQTFHSMVTG 674
P+ T+ S++ G
Sbjct: 290 SIDPDIVTYSSLING 304
>gi|298712189|emb|CBJ33061.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 531
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 88/202 (43%), Gaps = 1/202 (0%)
Query: 469 ELTHFLIK-AEKENLQVSHDDAALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYA 527
EL F+++ ++ + ++ + + G VIT+C + G +DQA L DEM AGV+ + Y
Sbjct: 303 ELALFVLRDMQRPDSRLEPNTYSYGSVITVCATCGEVDQAVGLFDEMPEAGVKVDAFTYN 362
Query: 528 SLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKES 587
S+ AY R R+ + L D G D Y A +++ + AL L +EM+E
Sbjct: 363 SVAMAYARDGRWRQAISTLSDMSELGHVGDVVSYTAAIRACGWAGECDRALSLLREMREE 422
Query: 588 KIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQ 647
K + + F + C +LL E+ + + I K +
Sbjct: 423 KGVKPNEKTFAAAISACGHGGRWERGLELLSEMPRSTGFLPDADCYTSAIKACGKGGQWE 482
Query: 648 DAEKALKRMRSLGHLPNAQTFH 669
A L+ + G P+A+T+
Sbjct: 483 QAFTLLREAAAEGTTPDAKTYE 504
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 57/248 (22%), Positives = 107/248 (43%), Gaps = 14/248 (5%)
Query: 507 AHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQ 566
A DLL E GV S Y +L A +A RPR+ +LLR R G D Y +
Sbjct: 235 ARDLLREQAKTGVPCSLISYNLVLSACKKAGRPRQAVSLLRAMRGHGCSPDVISYNTAIS 294
Query: 567 SKIVQKDTPGALHLFKEMK--ESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKE-G 623
+ + +++ AL + ++M+ +S++ + + + ++ CA E L E+ E G
Sbjct: 295 ACVKRREWELALFVLRDMQRPDSRLEPNTYS-YGSVITVCATCGEVDQAVGLFDEMPEAG 353
Query: 624 QRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMV--TGYAAIGGK 681
++D +N+V + + + A L M LGH+ + ++ + + G+A G+
Sbjct: 354 VKVD--AFTYNSVAMAYARDGRWRQAISTLSDMSELGHVGDVVSYTAAIRACGWA---GE 408
Query: 682 YTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFIDKY 741
L EM+ + +E+ + + GG + R E+++ M F+
Sbjct: 409 CDRALSLLREMR---EEKGVKPNEKTFAAAISACGHGGRWERGLELLSEMPRSTGFLPDA 465
Query: 742 KYRTLFLK 749
T +K
Sbjct: 466 DCYTSAIK 473
>gi|414881815|tpg|DAA58946.1| TPA: hypothetical protein ZEAMMB73_360564 [Zea mays]
Length = 792
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 68/294 (23%), Positives = 121/294 (41%), Gaps = 16/294 (5%)
Query: 488 DAALGHVITLCISLGWL------DQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPRE 541
D + V T + WL +A +L D+M AGV+ S Y SLL Y E R E
Sbjct: 389 DTGVPDVFTYGCLIHWLCKHQKLHEAVNLWDKMKEAGVKPSIVTYHSLLLGYCEKGRMDE 448
Query: 542 VTALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLV 601
L + G + Y L++ I +K A L EM+++ + G + +L+
Sbjct: 449 ALKLYSEMPDKGFPPNEVTYTTLMKGYIKKKAFDNAYALLNEMRQNGV-SCGDYTYNILI 507
Query: 602 KGCAQNHEAGLMAKLLQE-VKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLG 660
G + + ++L+ + EG +N++I+ F K +M A ++MR G
Sbjct: 508 NGLYMVNRVCEVDEMLKRFLSEG--FVPTTMTYNSIINGFVKAGMMGSAFGMYRQMRKKG 565
Query: 661 HLPNAQTFHSMVTGYAAIGGKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGF 720
PN T+ S + GY T +L ++ + + D ++ + TF + G
Sbjct: 566 ITPNIVTYTSFIDGYCR-----TNCCDLAVKLLIYVRRDGIQPDIAAYNAFIDTFCKQGN 620
Query: 721 FARANEVVAMMEEGKMFIDKYKYRTLFLKYHKTLYKGKTPKFQTEAQLKKREAA 774
+RA + ++ + + D Y + Y + KF + +K+R A
Sbjct: 621 MSRALHFLVLLLKDGLTPDVTVYNSFVTGYKNLKMMAEASKFY-YSMIKQRVVA 673
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 60/260 (23%), Positives = 113/260 (43%), Gaps = 19/260 (7%)
Query: 494 VITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLL-KAYIEANRPREVTALLRDARSA 552
V+ + + + +D+A L D+M LA + V A++L Y + L + S
Sbjct: 261 VVDVLVKVRRMDEALRLKDQMLLATGKKMDVVLATMLMHGYCLNGEVGKALDLFDEVVSD 320
Query: 553 GIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGL 612
G+ Y L++ + T L ++M E + S + EF +++KG ++
Sbjct: 321 GVTPTNVTYGVLIKGCDAEGMTDETYKLCRQMIEQGLLPSTY-EFNLVIKGLLRDKRWKD 379
Query: 613 MAKLLQEVKEGQRIDCGVHD---WNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFH 669
LL+ V +D GV D + +IH+ CK + + +A +M+ G P+ T+H
Sbjct: 380 AIGLLKLV-----VDTGVPDVFTYGCLIHWLCKHQKLHEAVNLWDKMKEAGVKPSIVTYH 434
Query: 670 SMVTGYAAIGGKYTEVTELWGEM--KSFASSTSMNFDEELLDSVLYTFVRGGFFARANEV 727
S++ GY G+ E +L+ EM K F +E +++ +++ F A +
Sbjct: 435 SLLLGYCE-KGRMDEALKLYSEMPDKGFPP------NEVTYTTLMKGYIKKKAFDNAYAL 487
Query: 728 VAMMEEGKMFIDKYKYRTLF 747
+ M + + Y Y L
Sbjct: 488 LNEMRQNGVSCGDYTYNILI 507
>gi|414888269|tpg|DAA64283.1| TPA: hypothetical protein ZEAMMB73_921256 [Zea mays]
Length = 616
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 66/272 (24%), Positives = 113/272 (41%), Gaps = 21/272 (7%)
Query: 464 AGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQAHDLLDEMHLAGVRASS 523
A +++ L H +++A VS D + H++ S G L +A +L EM G A +
Sbjct: 267 ADQSEMLLHTMLEA-----GVSPDTVSYRHIVDAFASAGNLSRAAELFSEMAATGHTADA 321
Query: 524 SVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKE 583
S Y L++A+ + A+LR ++ G A+ Y LL Q G LF+E
Sbjct: 322 SAYLGLMEAHTRVGATADAVAVLRQMQADGCAPTAATYRVLLDLYGRQGRFDGVRQLFRE 381
Query: 584 MKESKIPRSGHQE--FEMLVKGCAQNHEAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFC 641
M+ + P + F + G L +L+ + + C NV+
Sbjct: 382 MRTAVPPDTATYNVLFRVFGDGGFFKEVVELFHDMLKTGVQPDMVTC-----ENVMAACG 436
Query: 642 KKRLMQDAEKALKRMRSLGHLPNAQTFHSMVT--GYAAIGGKYTEVTELWGEMKSFASST 699
L DA + L+ M G +P A + +V G+AA+ Y E + M S
Sbjct: 437 HGGLHGDAREVLEYMTREGMVPTADAYTGLVEALGHAAM---YEEAYVAFNMMTEIGSLP 493
Query: 700 SMNFDEELLDSVLYTFVRGGFFARANEVVAMM 731
++ E +++ + + RGG F A + + M
Sbjct: 494 TL----ETYNALAFAYARGGLFQEAEAIFSRM 521
>gi|125587025|gb|EAZ27689.1| hypothetical protein OsJ_11637 [Oryza sativa Japonica Group]
Length = 650
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 64/270 (23%), Positives = 114/270 (42%), Gaps = 13/270 (4%)
Query: 482 LQVSHD-DAALGHVITLCISL-GWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRP 539
+Q HD D +++ C+ G L++A +L++M G + + +L+ A NR
Sbjct: 221 VQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRL 280
Query: 540 REVTALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEM 599
E L R G+ D + L+ + D AL LF+EMK S +
Sbjct: 281 EEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTL 340
Query: 600 LVKGCAQNHEAGLMAKLLQEVKEGQRIDC--GVHDWNNVIHFFCKKRLMQDAEKALKRMR 657
+ C+ G + K L +K+ + C +N +I CKK +++AE+ +M
Sbjct: 341 IDNLCS----LGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMD 396
Query: 658 SLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVR 717
G NA TF++++ G K + EL +M S + + +S+L + +
Sbjct: 397 LQGISRNAITFNTLIDGLCK-DKKIDDAFELINQM----ISEGLQPNNITYNSILTHYCK 451
Query: 718 GGFFARANEVVAMMEEGKMFIDKYKYRTLF 747
G +A +++ M +D Y TL
Sbjct: 452 QGDIKKAADILETMTANGFEVDVVTYGTLI 481
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 55/276 (19%), Positives = 111/276 (40%), Gaps = 42/276 (15%)
Query: 452 KIYIKLVKAFLEAGKTKELTHFLIKAEKENLQ----VSHDDAALGHVITLCISLGWLDQA 507
++ + +V +FL++ + ++L + LQ + D H++ + + +
Sbjct: 14 QVKLGVVHSFLDSYEGQQLFDDAVDLILNQLQPLFGIQADTVVYNHLLNVLVEGSKMKLL 73
Query: 508 HDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQS 567
+ EM G++ + +L+KA A++ R +L + S G+ D + + L+Q
Sbjct: 74 ESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQG 133
Query: 568 KIVQKDTPGALHLFKEMKE-----SKIP---------RSGHQE----------------- 596
+ + AL + M E +K+ + G E
Sbjct: 134 FVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPD 193
Query: 597 ---FEMLVKGCAQNHEAGLMAKLLQ-EVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKA 652
+ V G QN G K++ V+EG D V +N V++ CK +++A+
Sbjct: 194 QITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPD--VFTYNIVVNCLCKNGQLEEAKGI 251
Query: 653 LKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTEL 688
L +M G LP+ TF++++ G + E +L
Sbjct: 252 LNQMVDRGCLPDITTFNTLIAALCT-GNRLEEALDL 286
Score = 48.1 bits (113), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 90/430 (20%), Positives = 157/430 (36%), Gaps = 37/430 (8%)
Query: 248 AMKPNTNTFNIALAGCLLFETTRKAEQLLDIMPRIGVKADSNLLIIMAHIYERNGRREE- 306
+ P+ TF + G + + A ++ M +G A + ++ + Y + GR E+
Sbjct: 119 GVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDA 178
Query: 307 LRKLQRHIDEAVNLSDIQFRQFYNCLLSCHLKFGDLNSASKMVLEMLQRAKEARNSLAAA 366
L +Q+ I + I + F N L + + A K++ M+Q +
Sbjct: 179 LGYIQQEIADGFEPDQITYNTFVNGLC----QNDHVGHALKVMDVMVQEGHDPD------ 228
Query: 367 MLPFNAVGVNNRTPSEQNVNCTNSVDLENSGIIENHIL--SYEDFTKDRKFVALEAEVKR 424
+ +N V N C N E GI+ + D T +A R
Sbjct: 229 VFTYNIV---------VNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNR 279
Query: 425 VLQTLLGMLQKQVELITTEHGILQPTEKIYIKLVKAFLEAGKTKELTHFLIK--AEKENL 482
+ + L L +QV T G+ P + L+ A + G H ++ E +N
Sbjct: 280 LEEAL--DLARQV----TVKGV-SPDVYTFNILINALCKVGDP----HLALRLFEEMKNS 328
Query: 483 QVSHDDAALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREV 542
+ D+ +I SLG L +A DLL +M G S+ Y +++ + R E
Sbjct: 329 GCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEA 388
Query: 543 TALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVK 602
+ GI +A + L+ K A L +M + + +L
Sbjct: 389 EEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTH 448
Query: 603 GCAQNHEAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHL 662
C Q L G +D V + +I+ CK Q A K L+ MR G
Sbjct: 449 YCKQGDIKKAADILETMTANGFEVD--VVTYGTLINGLCKAGRTQVALKVLRGMRIKGMR 506
Query: 663 PNAQTFHSMV 672
P + ++ ++
Sbjct: 507 PTPKAYNPVL 516
Score = 45.1 bits (105), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 41/89 (46%)
Query: 502 GWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCY 561
G + +A D+L+ M G Y +L+ +A R + +LR R G++ Y
Sbjct: 453 GDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAY 512
Query: 562 EALLQSKIVQKDTPGALHLFKEMKESKIP 590
+LQS + + AL LF+EM E P
Sbjct: 513 NPVLQSLFRRNNIRDALSLFREMAEVGEP 541
Score = 44.7 bits (104), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 47/228 (20%), Positives = 96/228 (42%), Gaps = 9/228 (3%)
Query: 504 LDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEA 563
+++A ++ D+M L G+ ++ + +L+ + + + L+ S G+Q + Y +
Sbjct: 385 IEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNS 444
Query: 564 LLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVK-E 622
+L Q D A + + M + + L+ G + + K+L+ ++ +
Sbjct: 445 ILTHYCKQGDIKKAADILETMTANGF-EVDVVTYGTLINGLCKAGRTQVALKVLRGMRIK 503
Query: 623 GQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKY 682
G R +N V+ ++ ++DA + M +G P+A T+ + G GG
Sbjct: 504 GMRPT--PKAYNPVLQSLFRRNNIRDALSLFREMAEVGEPPDALTYKIVFRGLCRGGGPI 561
Query: 683 TEVTELWGEM--KSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVV 728
E + EM K F S +F +L L +F RA E++
Sbjct: 562 KEAFDFMLEMVDKGFIPEFS-SF--RMLAEGLLNLGMDDYFIRAIEII 606
>gi|449448914|ref|XP_004142210.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic-like [Cucumis sativus]
gi|449525343|ref|XP_004169677.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic-like [Cucumis sativus]
Length = 768
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 60/253 (23%), Positives = 114/253 (45%), Gaps = 12/253 (4%)
Query: 497 LCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQL 556
LC LG +++A +LD+M ++ Y +++ + + NR E T + R S GI
Sbjct: 353 LC-KLGEIEEAVKILDQMVSRDCSPNAVTYNAIISSLCKENRVDEATEIARLLTSKGILP 411
Query: 557 DASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKL 616
D + +L+Q + + A+ LF+EMK K R + ML+ + + + +
Sbjct: 412 DVCTFNSLIQGLCLSSNHKSAMDLFEEMK-GKGCRPDEFTYNMLIDSLCSSRK---LEEA 467
Query: 617 LQEVKEGQRIDCG--VHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTG 674
L +KE + C V +N +I FCK + +++AE+ M G ++ T+++++ G
Sbjct: 468 LNLLKEMELNGCARNVVIYNTLIDGFCKNKRIEEAEEIFDEMELQGVSRDSVTYNTLIDG 527
Query: 675 YAAIGGKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEG 734
+ + +L +M + D+ +S+L F + G +A ++V M
Sbjct: 528 LCK-SKRVEDAAQLMDQM----IMEGLRPDKFTYNSLLTHFCKTGDIKKAADIVQTMTSS 582
Query: 735 KMFIDKYKYRTLF 747
D Y TL
Sbjct: 583 GCNPDIVTYATLI 595
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/189 (21%), Positives = 76/189 (40%), Gaps = 2/189 (1%)
Query: 504 LDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEA 563
+++A ++ DEM L GV S Y +L+ ++ R + L+ G++ D Y +
Sbjct: 499 IEEAEEIFDEMELQGVSRDSVTYNTLIDGLCKSKRVEDAAQLMDQMIMEGLRPDKFTYNS 558
Query: 564 LLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEG 623
LL D A + + M S + L+ G + + ++LL+ ++
Sbjct: 559 LLTHFCKTGDIKKAADIVQTMTSSGC-NPDIVTYATLISGLCKAGRVQVASRLLRSIQMK 617
Query: 624 QRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYT 683
+ H +N VI K+ +A + + M P+A T+ + G GG
Sbjct: 618 GMV-LTPHAYNPVIQALFKRNRTHEAMRLFREMLDKSEPPDAITYKIVYRGLCNGGGPIG 676
Query: 684 EVTELWGEM 692
E + EM
Sbjct: 677 EAVDFTVEM 685
Score = 45.8 bits (107), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 40/189 (21%), Positives = 81/189 (42%), Gaps = 35/189 (18%)
Query: 519 VRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQKDTPGAL 578
+R S + L+KA +A++ R ++ + S G+ D + + ++Q I + GAL
Sbjct: 199 IRHDVSTFNILIKALCKAHQVRPAILMMEEMPSYGLSPDETTFTTIMQGYIEGGNLDGAL 258
Query: 579 HLFKEMKESKIPRSGHQEFEMLVKG-CAQNHEAGLMAKLLQEVKEGQR------------ 625
+ ++M E P + +L+ G C Q ++ + + V EG R
Sbjct: 259 RIKEQMVEYGCPCT-DVTVNVLINGFCKQGRIDQALSFIQEAVSEGFRPDQFTYNTLVNG 317
Query: 626 ---------------------IDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPN 664
+D ++ +N++I CK +++A K L +M S PN
Sbjct: 318 LCKIGHAKHAMEVVDAMLLGGLDPDIYTYNSLISGLCKLGEIEEAVKILDQMVSRDCSPN 377
Query: 665 AQTFHSMVT 673
A T++++++
Sbjct: 378 AVTYNAIIS 386
Score = 42.7 bits (99), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 30/137 (21%), Positives = 60/137 (43%), Gaps = 2/137 (1%)
Query: 454 YIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQAHDLLDE 513
Y L+ ++ + ++ + + E L+ D ++T G + +A D++
Sbjct: 521 YNTLIDGLCKSKRVEDAAQLMDQMIMEGLR--PDKFTYNSLLTHFCKTGDIKKAADIVQT 578
Query: 514 MHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQKD 573
M +G YA+L+ +A R + + LLR + G+ L Y ++Q+ +
Sbjct: 579 MTSSGCNPDIVTYATLISGLCKAGRVQVASRLLRSIQMKGMVLTPHAYNPVIQALFKRNR 638
Query: 574 TPGALHLFKEMKESKIP 590
T A+ LF+EM + P
Sbjct: 639 THEAMRLFREMLDKSEP 655
>gi|380875521|gb|AFF27500.1| PPR domain-containing protein [Oryza sativa Indica Group]
Length = 742
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 62/270 (22%), Positives = 115/270 (42%), Gaps = 13/270 (4%)
Query: 482 LQVSHD-DAALGHVITLCISL-GWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRP 539
+Q HD D +++ C+ G L++A +L++M G + + +L+ A NR
Sbjct: 313 VQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRL 372
Query: 540 REVTALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEM 599
E L R G+ D + L+ + D AL LF+EMK S +
Sbjct: 373 EEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTL 432
Query: 600 LVKGCAQNHEAGLMAKLLQEVKEGQRIDC--GVHDWNNVIHFFCKKRLMQDAEKALKRMR 657
+ C+ G + K L +K+ + C +N +I CKK +++AE+ +M
Sbjct: 433 IDNLCS----LGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMD 488
Query: 658 SLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVR 717
G NA TF++++ G K ++ + +G + S + + +S+L + +
Sbjct: 489 LQGISRNAITFNTLIDGLC----KDKKIDDAFGLINQMISE-GLQPNNITYNSILTHYCK 543
Query: 718 GGFFARANEVVAMMEEGKMFIDKYKYRTLF 747
G +A +++ M +D Y TL
Sbjct: 544 QGDIKKAADILETMTANGFEVDVVTYGTLI 573
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 55/276 (19%), Positives = 111/276 (40%), Gaps = 42/276 (15%)
Query: 452 KIYIKLVKAFLEAGKTKELTHFLIKAEKENLQ----VSHDDAALGHVITLCISLGWLDQA 507
++ + +V +FL++ + ++L + LQ + D H++ + + +
Sbjct: 106 QVKLGVVHSFLDSYEGQQLFDDAVDLILNQLQPLFGIQADTVVYNHLLNVLVEGSKMKLL 165
Query: 508 HDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQS 567
+ EM G++ + +L+KA A++ R +L + S G+ D + + L+Q
Sbjct: 166 ESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQG 225
Query: 568 KIVQKDTPGALHLFKEMKE-----SKIP---------RSGHQE----------------- 596
+ + AL + M E +K+ + G E
Sbjct: 226 FVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPD 285
Query: 597 ---FEMLVKGCAQNHEAGLMAKLLQ-EVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKA 652
+ V G QN G K++ V+EG D V +N V++ CK +++A+
Sbjct: 286 QITYNTFVNGLCQNDHVGHALKVMDVMVQEGH--DPDVFTYNIVVNCLCKNGQLEEAKGI 343
Query: 653 LKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTEL 688
L +M G LP+ TF++++ G + E +L
Sbjct: 344 LNQMVDRGCLPDITTFNTLIAALCT-GNRLEEALDL 378
Score = 48.5 bits (114), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 90/430 (20%), Positives = 157/430 (36%), Gaps = 37/430 (8%)
Query: 248 AMKPNTNTFNIALAGCLLFETTRKAEQLLDIMPRIGVKADSNLLIIMAHIYERNGRREE- 306
+ P+ TF + G + + A ++ M +G A + ++ + Y + GR E+
Sbjct: 211 GVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDA 270
Query: 307 LRKLQRHIDEAVNLSDIQFRQFYNCLLSCHLKFGDLNSASKMVLEMLQRAKEARNSLAAA 366
L +Q+ I + I + F N L + + A K++ M+Q +
Sbjct: 271 LGYIQQEIADGFEPDQITYNTFVNGLC----QNDHVGHALKVMDVMVQEGHDPD------ 320
Query: 367 MLPFNAVGVNNRTPSEQNVNCTNSVDLENSGIIENHI--LSYEDFTKDRKFVALEAEVKR 424
+ +N V N C N E GI+ + D T +A R
Sbjct: 321 VFTYNIV---------VNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNR 371
Query: 425 VLQTLLGMLQKQVELITTEHGILQPTEKIYIKLVKAFLEAGKTKELTHFLIK--AEKENL 482
+ + L L +QV T G+ P + L+ A + G H ++ E +N
Sbjct: 372 LEEAL--DLARQV----TVKGV-SPDVYTFNILINALCKVGDP----HLALRLFEEMKNS 420
Query: 483 QVSHDDAALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREV 542
+ D+ +I SLG L +A DLL +M G S+ Y +++ + R E
Sbjct: 421 GCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEA 480
Query: 543 TALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVK 602
+ GI +A + L+ K A L +M + + +L
Sbjct: 481 EEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFGLINQMISEGLQPNNITYNSILTH 540
Query: 603 GCAQNHEAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHL 662
C Q L G +D V + +I+ CK Q A K L+ MR G
Sbjct: 541 YCKQGDIKKAADILETMTANGFEVD--VVTYGTLINGLCKAGRTQVALKVLRGMRIKGMR 598
Query: 663 PNAQTFHSMV 672
P + ++ ++
Sbjct: 599 PTPKAYNPVL 608
Score = 45.8 bits (107), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 47/228 (20%), Positives = 96/228 (42%), Gaps = 9/228 (3%)
Query: 504 LDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEA 563
+++A ++ D+M L G+ ++ + +L+ + + + L+ S G+Q + Y +
Sbjct: 477 IEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFGLINQMISEGLQPNNITYNS 536
Query: 564 LLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVK-E 622
+L Q D A + + M + + L+ G + + K+L+ ++ +
Sbjct: 537 ILTHYCKQGDIKKAADILETMTANGF-EVDVVTYGTLINGLCKAGRTQVALKVLRGMRIK 595
Query: 623 GQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKY 682
G R +N V+ ++ ++DA + M +G P+A T+ + G GG
Sbjct: 596 GMRPT--PKAYNPVLQSLFRRNNIRDALSLFREMAEVGEPPDALTYKIVFRGLCRGGGPI 653
Query: 683 TEVTELWGEM--KSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVV 728
E + EM K F S +F +L L +F RA E++
Sbjct: 654 KEAFDFMLEMVDKGFIPEFS-SF--RMLAEGLLNLGMDDYFIRAIEII 698
Score = 45.1 bits (105), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 41/89 (46%)
Query: 502 GWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCY 561
G + +A D+L+ M G Y +L+ +A R + +LR R G++ Y
Sbjct: 545 GDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAY 604
Query: 562 EALLQSKIVQKDTPGALHLFKEMKESKIP 590
+LQS + + AL LF+EM E P
Sbjct: 605 NPVLQSLFRRNNIRDALSLFREMAEVGEP 633
>gi|38567720|emb|CAE76009.1| B1358B12.18 [Oryza sativa Japonica Group]
gi|90265197|emb|CAH67636.1| B0812A04.6 [Oryza sativa Indica Group]
Length = 609
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/246 (23%), Positives = 105/246 (42%), Gaps = 9/246 (3%)
Query: 499 ISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDA 558
+ LG L A ++ DEM GVR + + +++ A L R AG+ D
Sbjct: 251 VRLGELASAQNVFDEMQSRGVRRTVVSFNTMISGMCRAGDLDGAETLHRRMSEAGVTPDV 310
Query: 559 SCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQ 618
Y AL+Q A +F++M + + F +L+ + +A M +L +
Sbjct: 311 YTYGALIQGLCRVGRIEDARGVFEKMCGRGM-KPNAVVFTILIDAHCKKGDAETMLELHR 369
Query: 619 EVKE-GQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAA 677
E++E G R D +N +++ C+ R ++ A + MRS G P+ T+ +++ GY
Sbjct: 370 EMRERGVRPD--AVTYNAIVNGLCRARDLKSASGIVVEMRSAGLRPDTVTYTTLIDGYCK 427
Query: 678 IGGKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMF 737
E ++ E+K + + DE +++ + G A A V+ M E +
Sbjct: 428 -----EEELDMAMEIKQNMVAEGVGLDEVTYTALISGLSKAGRSADAERVLGEMMEAGLE 482
Query: 738 IDKYKY 743
D Y
Sbjct: 483 PDNTTY 488
Score = 49.3 bits (116), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 47/230 (20%), Positives = 94/230 (40%), Gaps = 35/230 (15%)
Query: 484 VSHDDAALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVT 543
V+ D G +I +G ++ A + ++M G++ ++ V+ L+ A+ + +
Sbjct: 306 VTPDVYTYGALIQGLCRVGRIEDARGVFEKMCGRGMKPNAVVFTILIDAHCKKGDAETML 365
Query: 544 ALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKG 603
L R+ R G++ DA Y A++ +D A + EM+ + + R + L+ G
Sbjct: 366 ELHREMRERGVRPDAVTYNAIVNGLCRARDLKSASGIVVEMRSAGL-RPDTVTYTTLIDG 424
Query: 604 CAQNHEAGLMAKLLQE-VKEGQRID-----------------------------CGVHDW 633
+ E + ++ Q V EG +D G+
Sbjct: 425 YCKEEELDMAMEIKQNMVAEGVGLDEVTYTALISGLSKAGRSADAERVLGEMMEAGLEPD 484
Query: 634 NN----VIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIG 679
N VI FC+K ++ + LK M++ G P T++ ++ G+ +G
Sbjct: 485 NTTYTMVIDAFCRKGDVKTGLRLLKEMQNKGRKPGVVTYNVIMNGFCKLG 534
Score = 42.7 bits (99), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 47/235 (20%), Positives = 91/235 (38%), Gaps = 10/235 (4%)
Query: 518 GVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQKDTPGA 577
G+R + L+ + A E A AG+ +A + L++ + + A
Sbjct: 203 GIRLEPTSCTGLMSRFPTAP---EACAFYLQLLDAGLPPEAKLFNVLMRDLVRLGELASA 259
Query: 578 LHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRIDCGVHDWNNVI 637
++F EM+ + R+ F ++ G + + L + + E + V+ + +I
Sbjct: 260 QNVFDEMQSRGVRRT-VVSFNTMISGMCRAGDLDGAETLHRRMSEAG-VTPDVYTYGALI 317
Query: 638 HFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEMKSFAS 697
C+ ++DA ++M G PNA F ++ + G T + EL EM+
Sbjct: 318 QGLCRVGRIEDARGVFEKMCGRGMKPNAVVFTILIDAHCKKGDAET-MLELHREMR---- 372
Query: 698 STSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFIDKYKYRTLFLKYHK 752
+ D ++++ R A+ +V M + D Y TL Y K
Sbjct: 373 ERGVRPDAVTYNAIVNGLCRARDLKSASGIVVEMRSAGLRPDTVTYTTLIDGYCK 427
>gi|115454009|ref|NP_001050605.1| Os03g0597200 [Oryza sativa Japonica Group]
gi|28875991|gb|AAO60000.1| putative pentatricopeptide repeat protein [Oryza sativa Japonica
Group]
gi|108709658|gb|ABF97453.1| DEAD/DEAH box helicase family protein, putative, expressed [Oryza
sativa Japonica Group]
gi|113549076|dbj|BAF12519.1| Os03g0597200 [Oryza sativa Japonica Group]
Length = 742
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 64/270 (23%), Positives = 114/270 (42%), Gaps = 13/270 (4%)
Query: 482 LQVSHD-DAALGHVITLCISL-GWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRP 539
+Q HD D +++ C+ G L++A +L++M G + + +L+ A NR
Sbjct: 313 VQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRL 372
Query: 540 REVTALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEM 599
E L R G+ D + L+ + D AL LF+EMK S +
Sbjct: 373 EEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTL 432
Query: 600 LVKGCAQNHEAGLMAKLLQEVKEGQRIDC--GVHDWNNVIHFFCKKRLMQDAEKALKRMR 657
+ C+ G + K L +K+ + C +N +I CKK +++AE+ +M
Sbjct: 433 IDNLCS----LGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMD 488
Query: 658 SLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVR 717
G NA TF++++ G K + EL +M S + + +S+L + +
Sbjct: 489 LQGISRNAITFNTLIDGLCK-DKKIDDAFELINQM----ISEGLQPNNITYNSILTHYCK 543
Query: 718 GGFFARANEVVAMMEEGKMFIDKYKYRTLF 747
G +A +++ M +D Y TL
Sbjct: 544 QGDIKKAADILETMTANGFEVDVVTYGTLI 573
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 55/276 (19%), Positives = 111/276 (40%), Gaps = 42/276 (15%)
Query: 452 KIYIKLVKAFLEAGKTKELTHFLIKAEKENLQ----VSHDDAALGHVITLCISLGWLDQA 507
++ + +V +FL++ + ++L + LQ + D H++ + + +
Sbjct: 106 QVKLGVVHSFLDSYEGQQLFDDAVDLILNQLQPLFGIQADTVVYNHLLNVLVEGSKMKLL 165
Query: 508 HDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQS 567
+ EM G++ + +L+KA A++ R +L + S G+ D + + L+Q
Sbjct: 166 ESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQG 225
Query: 568 KIVQKDTPGALHLFKEMKE-----SKIP---------RSGHQE----------------- 596
+ + AL + M E +K+ + G E
Sbjct: 226 FVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPD 285
Query: 597 ---FEMLVKGCAQNHEAGLMAKLLQ-EVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKA 652
+ V G QN G K++ V+EG D V +N V++ CK +++A+
Sbjct: 286 QITYNTFVNGLCQNDHVGHALKVMDVMVQEGH--DPDVFTYNIVVNCLCKNGQLEEAKGI 343
Query: 653 LKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTEL 688
L +M G LP+ TF++++ G + E +L
Sbjct: 344 LNQMVDRGCLPDITTFNTLIAALCT-GNRLEEALDL 378
Score = 48.9 bits (115), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 90/430 (20%), Positives = 157/430 (36%), Gaps = 37/430 (8%)
Query: 248 AMKPNTNTFNIALAGCLLFETTRKAEQLLDIMPRIGVKADSNLLIIMAHIYERNGRREE- 306
+ P+ TF + G + + A ++ M +G A + ++ + Y + GR E+
Sbjct: 211 GVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDA 270
Query: 307 LRKLQRHIDEAVNLSDIQFRQFYNCLLSCHLKFGDLNSASKMVLEMLQRAKEARNSLAAA 366
L +Q+ I + I + F N L + + A K++ M+Q +
Sbjct: 271 LGYIQQEIADGFEPDQITYNTFVNGLC----QNDHVGHALKVMDVMVQEGHDPD------ 320
Query: 367 MLPFNAVGVNNRTPSEQNVNCTNSVDLENSGIIENHI--LSYEDFTKDRKFVALEAEVKR 424
+ +N V N C N E GI+ + D T +A R
Sbjct: 321 VFTYNIV---------VNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNR 371
Query: 425 VLQTLLGMLQKQVELITTEHGILQPTEKIYIKLVKAFLEAGKTKELTHFLIK--AEKENL 482
+ + L L +QV T G+ P + L+ A + G H ++ E +N
Sbjct: 372 LEEAL--DLARQV----TVKGV-SPDVYTFNILINALCKVGDP----HLALRLFEEMKNS 420
Query: 483 QVSHDDAALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREV 542
+ D+ +I SLG L +A DLL +M G S+ Y +++ + R E
Sbjct: 421 GCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEA 480
Query: 543 TALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVK 602
+ GI +A + L+ K A L +M + + +L
Sbjct: 481 EEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTH 540
Query: 603 GCAQNHEAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHL 662
C Q L G +D V + +I+ CK Q A K L+ MR G
Sbjct: 541 YCKQGDIKKAADILETMTANGFEVD--VVTYGTLINGLCKAGRTQVALKVLRGMRIKGMR 598
Query: 663 PNAQTFHSMV 672
P + ++ ++
Sbjct: 599 PTPKAYNPVL 608
Score = 45.1 bits (105), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 47/228 (20%), Positives = 96/228 (42%), Gaps = 9/228 (3%)
Query: 504 LDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEA 563
+++A ++ D+M L G+ ++ + +L+ + + + L+ S G+Q + Y +
Sbjct: 477 IEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNS 536
Query: 564 LLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVK-E 622
+L Q D A + + M + + L+ G + + K+L+ ++ +
Sbjct: 537 ILTHYCKQGDIKKAADILETMTANGF-EVDVVTYGTLINGLCKAGRTQVALKVLRGMRIK 595
Query: 623 GQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKY 682
G R +N V+ ++ ++DA + M +G P+A T+ + G GG
Sbjct: 596 GMRPT--PKAYNPVLQSLFRRNNIRDALSLFREMAEVGEPPDALTYKIVFRGLCRGGGPI 653
Query: 683 TEVTELWGEM--KSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVV 728
E + EM K F S +F +L L +F RA E++
Sbjct: 654 KEAFDFMLEMVDKGFIPEFS-SF--RMLAEGLLNLGMDDYFIRAIEII 698
Score = 45.1 bits (105), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 41/89 (46%)
Query: 502 GWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCY 561
G + +A D+L+ M G Y +L+ +A R + +LR R G++ Y
Sbjct: 545 GDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAY 604
Query: 562 EALLQSKIVQKDTPGALHLFKEMKESKIP 590
+LQS + + AL LF+EM E P
Sbjct: 605 NPVLQSLFRRNNIRDALSLFREMAEVGEP 633
>gi|356561683|ref|XP_003549109.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12775,
mitochondrial-like [Glycine max]
Length = 445
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/242 (22%), Positives = 108/242 (44%), Gaps = 7/242 (2%)
Query: 454 YIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLG-WLDQAHDLLD 512
Y L+ +AG+TK + L K E +++ D + I C+ L A DL
Sbjct: 169 YGTLINGLCKAGETKAVARLLRKLEGHSVK---PDLVMYTTIIHCLCKNKLLGDACDLYS 225
Query: 513 EMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQK 572
EM + G+ + Y +L+ + +E +LL + + I D + L+ + +
Sbjct: 226 EMIVKGISPNVFTYTTLIHGFCIMGNLKEAFSLLNEMKLKNINPDVYTFNILIDALAKEG 285
Query: 573 DTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRIDCGVHD 632
A+ LF+EMK + + L+ G +NH L +++KE Q I V+
Sbjct: 286 KIDEAMSLFEEMKHKNM-FPNIVTYTSLIDGLCKNHHLERAIALCKKMKE-QGIQPNVYS 343
Query: 633 WNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEM 692
+ ++ CK +++A++ + + G+ N +T++ M+ G G + +V +L +M
Sbjct: 344 YTILLDALCKGGRLENAKQFFQHLLVKGYHLNVRTYNVMINGLCK-AGLFGDVMDLKSKM 402
Query: 693 KS 694
+
Sbjct: 403 EG 404
>gi|224096624|ref|XP_002310676.1| predicted protein [Populus trichocarpa]
gi|222853579|gb|EEE91126.1| predicted protein [Populus trichocarpa]
Length = 424
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 101/209 (48%), Gaps = 8/209 (3%)
Query: 504 LDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEA 563
+D+A +L DEM GV ++ Y +L+KA +A RPR+ L R + G+ D Y
Sbjct: 196 IDEAMELFDEMSHRGVVPNAVTYNTLIKALCQALRPRDAQVLFRKMCACGLSPDILAYST 255
Query: 564 LLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQE-VKE 622
LL Q + L LF+EM + ++ + + +++ G ++ + ++L + E
Sbjct: 256 LLDGFCKQGNLDEMLVLFQEM-QRRLVKPDLVVYTIIINGMCRSRKVKDAKEVLSRLIVE 314
Query: 623 GQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKY 682
G + D VH + ++ C++ + +A + ++M G +P + +++ ++ G
Sbjct: 315 GLKPD--VHTYTALVDGLCREGSIIEALRLFRKMEEDGCMPGSCSYNVLLQGCLQHNDTS 372
Query: 683 TEVTELWGEMKS---FASSTSMNFDEELL 708
T V +L EM +A + + F ++ L
Sbjct: 373 T-VVQLIHEMADRGFYADAVTRTFLKDFL 400
Score = 46.2 bits (108), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 40/179 (22%), Positives = 76/179 (42%), Gaps = 3/179 (1%)
Query: 444 HGILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGW 503
H + P Y L+KA +A + ++ K L S D A ++ G
Sbjct: 208 HRGVVPNAVTYNTLIKALCQALRPRDAQVLFRKMCACGL--SPDILAYSTLLDGFCKQGN 265
Query: 504 LDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEA 563
LD+ L EM V+ VY ++ + + ++ +L G++ D Y A
Sbjct: 266 LDEMLVLFQEMQRRLVKPDLVVYTIIINGMCRSRKVKDAKEVLSRLIVEGLKPDVHTYTA 325
Query: 564 LLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKE 622
L+ + AL LF++M+E G + +L++GC Q+++ + +L+ E+ +
Sbjct: 326 LVDGLCREGSIIEALRLFRKMEEDGC-MPGSCSYNVLLQGCLQHNDTSTVVQLIHEMAD 383
>gi|225457536|ref|XP_002272226.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
mitochondrial [Vitis vinifera]
gi|297745544|emb|CBI40709.3| unnamed protein product [Vitis vinifera]
Length = 695
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 63/263 (23%), Positives = 117/263 (44%), Gaps = 8/263 (3%)
Query: 443 EHGILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLG 502
+ G L P + Y L+K +++ G K+ I +E E S D+ +I + G
Sbjct: 318 KEGGLMPRTRAYNALLKGYVKTGSLKDAES--IVSEMERSGFSPDEHTYSLLIDAYANAG 375
Query: 503 WLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYE 562
+ A +L EM +GVR +S V++ +L +Y + + ++ +LR+ R++G+ D Y
Sbjct: 376 RWESARIVLKEMEASGVRPNSYVFSRILASYRDRGKWQKSFQVLREMRNSGVSPDRHFYN 435
Query: 563 ALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKE 622
++ + AL F M+ + ++ C H +L + ++E
Sbjct: 436 VMIDTFGKCNCLDHALATFDRMRMEGVQPDAVTWNTLIDCHCKSGHH-NKAEELFEAMQE 494
Query: 623 GQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKY 682
C +N +I+ F ++ +D + L +M+S G L N T+ ++V Y G++
Sbjct: 495 SGCSPC-TTTYNIMINSFGEQERWEDVKTLLGKMQSQGLLANVVTYTTLVDIYGQ-SGRF 552
Query: 683 TEVTELWGEMKSFA---SSTSMN 702
+ E MKS SST N
Sbjct: 553 KDAIECLEVMKSVGLKPSSTMYN 575
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/241 (22%), Positives = 104/241 (43%), Gaps = 13/241 (5%)
Query: 457 LVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQAHDLLDEMHL 516
++ F ++G FL + L S A L VIT + G ++A + +E+
Sbjct: 262 IIVGFAKSGDVNRAMSFLAMVQGNGL--SPKTATLVAVITALGNAGRTEEAEAIFEELKE 319
Query: 517 AGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQKDTPG 576
G+ + Y +LLK Y++ ++ +++ + +G D Y L+ +
Sbjct: 320 GGLMPRTRAYNALLKGYVKTGSLKDAESIVSEMERSGFSPDEHTYSLLIDAYANAGRWES 379
Query: 577 ALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRIDCGV----HD 632
A + KEM+ S + R F ++ A + G K Q ++E + + GV H
Sbjct: 380 ARIVLKEMEASGV-RPNSYVFSRIL---ASYRDRGKWQKSFQVLREMR--NSGVSPDRHF 433
Query: 633 WNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEM 692
+N +I F K + A RMR G P+A T+++++ + G + + EL+ M
Sbjct: 434 YNVMIDTFGKCNCLDHALATFDRMRMEGVQPDAVTWNTLIDCHCK-SGHHNKAEELFEAM 492
Query: 693 K 693
+
Sbjct: 493 Q 493
Score = 40.4 bits (93), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 44/245 (17%), Positives = 102/245 (41%), Gaps = 3/245 (1%)
Query: 433 LQKQVELITTEHGILQPTEKI-YIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAAL 491
L+K + L++ P++ + Y ++++ K+ I AE E+ ++ D L
Sbjct: 200 LEKALNLMSRMRRDGFPSDFVNYSFIIQSLTRTNKSDSSMLQKIYAEIESDKIELDGQLL 259
Query: 492 GHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARS 551
+I G +++A L + G+ ++ +++ A A R E A+ + +
Sbjct: 260 NDIIVGFAKSGDVNRAMSFLAMVQGNGLSPKTATLVAVITALGNAGRTEEAEAIFEELKE 319
Query: 552 AGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAG 611
G+ Y ALL+ + A + EM+ S H + +L+ A N
Sbjct: 320 GGLMPRTRAYNALLKGYVKTGSLKDAESIVSEMERSGFSPDEHT-YSLLIDAYA-NAGRW 377
Query: 612 LMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSM 671
A+++ + E + + ++ ++ + + Q + + L+ MR+ G P+ ++ M
Sbjct: 378 ESARIVLKEMEASGVRPNSYVFSRILASYRDRGKWQKSFQVLREMRNSGVSPDRHFYNVM 437
Query: 672 VTGYA 676
+ +
Sbjct: 438 IDTFG 442
>gi|125544747|gb|EAY90886.1| hypothetical protein OsI_12495 [Oryza sativa Indica Group]
Length = 742
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 64/270 (23%), Positives = 114/270 (42%), Gaps = 13/270 (4%)
Query: 482 LQVSHD-DAALGHVITLCISL-GWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRP 539
+Q HD D +++ C+ G L++A +L++M G + + +L+ A NR
Sbjct: 313 VQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRL 372
Query: 540 REVTALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEM 599
E L R G+ D + L+ + D AL LF+EMK S +
Sbjct: 373 EEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTL 432
Query: 600 LVKGCAQNHEAGLMAKLLQEVKEGQRIDC--GVHDWNNVIHFFCKKRLMQDAEKALKRMR 657
+ C+ G + K L +K+ + C +N +I CKK +++AE+ +M
Sbjct: 433 IDNLCS----LGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMD 488
Query: 658 SLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVR 717
G NA TF++++ G K + EL +M S + + +S+L + +
Sbjct: 489 LQGISRNAITFNTLIDGLCK-DKKIDDAFELINQM----ISEGLQPNNITYNSILTHYCK 543
Query: 718 GGFFARANEVVAMMEEGKMFIDKYKYRTLF 747
G +A +++ M +D Y TL
Sbjct: 544 QGDIKKAADILETMTANGFEVDVVTYGTLI 573
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 55/276 (19%), Positives = 111/276 (40%), Gaps = 42/276 (15%)
Query: 452 KIYIKLVKAFLEAGKTKELTHFLIKAEKENLQ----VSHDDAALGHVITLCISLGWLDQA 507
++ + +V +FL++ + ++L + LQ + D H++ + + +
Sbjct: 106 QVKLGVVHSFLDSYEGQQLFDDAVDLILNQLQPLFGIQADTVVYNHLLNVLVEGSKMKLL 165
Query: 508 HDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQS 567
+ EM G++ + +L+KA A++ R +L + S G+ D + + L+Q
Sbjct: 166 ESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTAVIMLEEMSSRGVAPDETTFTTLMQG 225
Query: 568 KIVQKDTPGALHLFKEMKE-----SKIP---------RSGHQE----------------- 596
+ + AL + M E +K+ + G E
Sbjct: 226 FVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPD 285
Query: 597 ---FEMLVKGCAQNHEAGLMAKLLQ-EVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKA 652
+ V G QN G K++ V+EG D V +N V++ CK +++A+
Sbjct: 286 QITYNTFVNGLCQNDHVGHALKVMDVMVQEGH--DPDVFTYNIVVNCLCKNGQLEEAKGI 343
Query: 653 LKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTEL 688
L +M G LP+ TF++++ G + E +L
Sbjct: 344 LNQMVDRGCLPDITTFNTLIAALCT-GNRLEEALDL 378
Score = 48.9 bits (115), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 90/430 (20%), Positives = 157/430 (36%), Gaps = 37/430 (8%)
Query: 248 AMKPNTNTFNIALAGCLLFETTRKAEQLLDIMPRIGVKADSNLLIIMAHIYERNGRREE- 306
+ P+ TF + G + + A ++ M +G A + ++ + Y + GR E+
Sbjct: 211 GVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDA 270
Query: 307 LRKLQRHIDEAVNLSDIQFRQFYNCLLSCHLKFGDLNSASKMVLEMLQRAKEARNSLAAA 366
L +Q+ I + I + F N L + + A K++ M+Q +
Sbjct: 271 LGYIQQEIADGFEPDQITYNTFVNGLC----QNDHVGHALKVMDVMVQEGHDPD------ 320
Query: 367 MLPFNAVGVNNRTPSEQNVNCTNSVDLENSGIIENHIL--SYEDFTKDRKFVALEAEVKR 424
+ +N V N C N E GI+ + D T +A R
Sbjct: 321 VFTYNIV---------VNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNR 371
Query: 425 VLQTLLGMLQKQVELITTEHGILQPTEKIYIKLVKAFLEAGKTKELTHFLIK--AEKENL 482
+ + L L +QV T G+ P + L+ A + G H ++ E +N
Sbjct: 372 LEEAL--DLARQV----TVKGV-SPDVYTFNILINALCKVGDP----HLALRLFEEMKNS 420
Query: 483 QVSHDDAALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREV 542
+ D+ +I SLG L +A DLL +M G S+ Y +++ + R E
Sbjct: 421 GCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEA 480
Query: 543 TALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVK 602
+ GI +A + L+ K A L +M + + +L
Sbjct: 481 EEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTH 540
Query: 603 GCAQNHEAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHL 662
C Q L G +D V + +I+ CK Q A K L+ MR G
Sbjct: 541 YCKQGDIKKAADILETMTANGFEVD--VVTYGTLINGLCKAGRTQVALKVLRGMRIKGMR 598
Query: 663 PNAQTFHSMV 672
P + ++ ++
Sbjct: 599 PTPKAYNPVL 608
Score = 45.1 bits (105), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 47/228 (20%), Positives = 96/228 (42%), Gaps = 9/228 (3%)
Query: 504 LDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEA 563
+++A ++ D+M L G+ ++ + +L+ + + + L+ S G+Q + Y +
Sbjct: 477 IEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNS 536
Query: 564 LLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVK-E 622
+L Q D A + + M + + L+ G + + K+L+ ++ +
Sbjct: 537 ILTHYCKQGDIKKAADILETMTANGF-EVDVVTYGTLINGLCKAGRTQVALKVLRGMRIK 595
Query: 623 GQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKY 682
G R +N V+ ++ ++DA + M +G P+A T+ + G GG
Sbjct: 596 GMRPT--PKAYNPVLQSLFRRNNIRDALSLFREMAEVGEPPDALTYKIVFRGLCRGGGPI 653
Query: 683 TEVTELWGEM--KSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVV 728
E + EM K F S +F +L L +F RA E++
Sbjct: 654 KEAFDFMLEMVDKGFIPEFS-SF--RMLAEGLLNLGMDDYFIRAIEII 698
Score = 45.1 bits (105), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 41/89 (46%)
Query: 502 GWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCY 561
G + +A D+L+ M G Y +L+ +A R + +LR R G++ Y
Sbjct: 545 GDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAY 604
Query: 562 EALLQSKIVQKDTPGALHLFKEMKESKIP 590
+LQS + + AL LF+EM E P
Sbjct: 605 NPVLQSLFRRNNIRDALSLFREMAEVGEP 633
>gi|414881814|tpg|DAA58945.1| TPA: hypothetical protein ZEAMMB73_003881 [Zea mays]
Length = 792
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 68/294 (23%), Positives = 121/294 (41%), Gaps = 16/294 (5%)
Query: 488 DAALGHVITLCISLGWL------DQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPRE 541
D + V T + WL +A +L D+M AGV+ S Y SLL Y E R E
Sbjct: 389 DTGVPDVFTYGCLIHWLCKHQKLHEAVNLWDKMKEAGVKPSIVTYHSLLLGYCEKGRMDE 448
Query: 542 VTALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLV 601
L + G + Y L++ I +K A L EM+++ + G + +L+
Sbjct: 449 ALKLYSEMPDKGFPPNEVTYTTLMKGYIKKKAFDNAYALLNEMRQNGV-SCGDYTYNILI 507
Query: 602 KGCAQNHEAGLMAKLLQE-VKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLG 660
G + + ++L+ + EG +N++I+ F K +M A ++MR G
Sbjct: 508 NGLYMVNRVCEVDEMLKRFLSEG--FVPTTMTYNSIINGFVKAGMMGSAFGMYRQMRKKG 565
Query: 661 HLPNAQTFHSMVTGYAAIGGKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGF 720
PN T+ S + GY T +L ++ + + D ++ + TF + G
Sbjct: 566 ITPNIVTYTSFIDGYCR-----TNCCDLAVKLLIYVRRDGIQPDIAAYNAFIDTFCKQGN 620
Query: 721 FARANEVVAMMEEGKMFIDKYKYRTLFLKYHKTLYKGKTPKFQTEAQLKKREAA 774
+RA + ++ + + D Y + Y + KF + +K+R A
Sbjct: 621 MSRALHFLVLLLKDGLTPDVTVYNSFVTGYKNLKMMAEASKFY-YSMIKQRVVA 673
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 60/260 (23%), Positives = 114/260 (43%), Gaps = 19/260 (7%)
Query: 494 VITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLL-KAYIEANRPREVTALLRDARSA 552
V+ + + +G +D+A L D+M LA + V A++L Y + L + S
Sbjct: 261 VVDVLVKVGRMDEALRLKDQMLLATGKKMDVVLATMLMHGYCLHGEVGKALDLFDEVVSD 320
Query: 553 GIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGL 612
G+ Y L++ + + L ++M E + S + EF +++KG ++
Sbjct: 321 GVTPTNVTYGVLIKGCDAEGMSDETYKLCRQMIEQGLLLSTY-EFNLVIKGLLRDKRWKD 379
Query: 613 MAKLLQEVKEGQRIDCGVHD---WNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFH 669
LL+ V +D GV D + +IH+ CK + + +A +M+ G P+ T+H
Sbjct: 380 AIGLLELV-----VDTGVPDVFTYGCLIHWLCKHQKLHEAVNLWDKMKEAGVKPSIVTYH 434
Query: 670 SMVTGYAAIGGKYTEVTELWGEM--KSFASSTSMNFDEELLDSVLYTFVRGGFFARANEV 727
S++ GY G+ E +L+ EM K F +E +++ +++ F A +
Sbjct: 435 SLLLGYCE-KGRMDEALKLYSEMPDKGFPP------NEVTYTTLMKGYIKKKAFDNAYAL 487
Query: 728 VAMMEEGKMFIDKYKYRTLF 747
+ M + + Y Y L
Sbjct: 488 LNEMRQNGVSCGDYTYNILI 507
>gi|255540825|ref|XP_002511477.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223550592|gb|EEF52079.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 754
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 62/309 (20%), Positives = 132/309 (42%), Gaps = 38/309 (12%)
Query: 477 AEKENLQVSHDDAALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEA 536
AE + + D ++ C + G D+A + M+ G+ + Y +L++ + +
Sbjct: 237 AEMRHEGIQPDIITYNTLLNACANRGLGDEAEMVFRTMNEGGMVPDITTYRNLVETFGKL 296
Query: 537 NRPREVTALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESK-IPRS--- 592
N+ +V+ LL++ S+G D S Y LL++ + D A+ +F++M+E++ +P +
Sbjct: 297 NKLEKVSELLKEMESSGNLPDISSYNVLLEAYASKGDIRHAMGVFRQMQEARCVPNAVTY 356
Query: 593 --------GHQEF----EMLVKGCAQNHE--AGLMAKLLQEVKEG--------------- 623
GH + E+ ++ N E G L++ EG
Sbjct: 357 SMLLNLYGGHGRYDDVRELFLEMKVSNTEPDVGTYNVLIEVFGEGGYFKEVVTLFHDMVE 416
Query: 624 QRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYT 683
+ ++ + + +I+ K L +DA+K L M G +P+ + + ++ Y Y
Sbjct: 417 ENVEPNMGTYEGLIYACGKGGLHEDAKKILLHMDEKGIVPSTKAYTGVIEAYGQ-AASYE 475
Query: 684 EVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFIDKYKY 743
E ++ M S ++ E +S++ F RGG + + ++ M E + D+ +
Sbjct: 476 EALVMFNTMNEMGSKPTV----ETYNSLINMFARGGLYKESEAIMWKMGESGVARDRDSF 531
Query: 744 RTLFLKYHK 752
+ Y +
Sbjct: 532 NGVIEGYRQ 540
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 89/445 (20%), Positives = 164/445 (36%), Gaps = 63/445 (14%)
Query: 248 AMKPNTNTFNIALAGCLLFETTRKAEQLLDIMPRIGVKADSNLLIIMAHIYERNGRREEL 307
++P+ T+N L C +AE + M G+ D + + + + E++
Sbjct: 243 GIQPDIITYNTLLNACANRGLGDEAEMVFRTMNEGGMVPDITTYRNLVETFGKLNKLEKV 302
Query: 308 RKLQRHIDEAVNLSDIQFRQFYNCLLSCHLKFGDLNSASKMVLEMLQRAKEARNSLAAAM 367
+L + ++ + NL DI YN LL + GD+ A V +Q A+ N++ +M
Sbjct: 303 SELLKEMESSGNLPDISS---YNVLLEAYASKGDIRHAMG-VFRQMQEARCVPNAVTYSM 358
Query: 368 LPFNAVGVNNRTPSEQNVNCTNSVDLENSGIIENHILSYEDFTKDRKFVALEAEVKRVLQ 427
L N G + R Y+D + + LE +V
Sbjct: 359 L-LNLYGGHGR---------------------------YDDVRE----LFLEMKVSNT-- 384
Query: 428 TLLGMLQKQVELITTEHGILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHD 487
+P Y L++ F E G KE+ +EN V +
Sbjct: 385 --------------------EPDVGTYNVLIEVFGEGGYFKEVVTLFHDMVEEN--VEPN 422
Query: 488 DAALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLR 547
+I C G + A +L M G+ S+ Y +++AY +A E +
Sbjct: 423 MGTYEGLIYACGKGGLHEDAKKILLHMDEKGIVPSTKAYTGVIEAYGQAASYEEALVMFN 482
Query: 548 DARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQN 607
G + Y +L+ + + +M ES + R F +++G Q
Sbjct: 483 TMNEMGSKPTVETYNSLINMFARGGLYKESEAIMWKMGESGVARD-RDSFNGVIEGYRQG 541
Query: 608 HEAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQT 667
+ K E+ E R + V+ +C L+ ++E+ + +R+ G LP+
Sbjct: 542 GQFEEAIKTYVEL-EKARFQPDERTFEAVLSVYCTAGLVDESEEQFREIRASGILPSVMC 600
Query: 668 FHSMVTGYAAIGGKYTEVTELWGEM 692
+ M+ YA ++ + E+ EM
Sbjct: 601 YCMMIAVYAR-SNRWDDAYEVLDEM 624
>gi|115445449|ref|NP_001046504.1| Os02g0266200 [Oryza sativa Japonica Group]
gi|50251963|dbj|BAD27898.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113536035|dbj|BAF08418.1| Os02g0266200 [Oryza sativa Japonica Group]
gi|125581581|gb|EAZ22512.1| hypothetical protein OsJ_06176 [Oryza sativa Japonica Group]
gi|215704610|dbj|BAG94238.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215737116|dbj|BAG96045.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 632
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 74/335 (22%), Positives = 133/335 (39%), Gaps = 22/335 (6%)
Query: 448 QPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQA 507
+P Y +L++ +AG+ E HF + ++E+ + D + ++I G LD
Sbjct: 297 RPDVFTYTELIRGLGKAGRIDEAYHFYHEMQREDCK--PDTVVMNNMINFLGKAGRLDDG 354
Query: 508 HDLLDEMHLAGVRASSSVYASLLKAYIEA-NRPREVTALLRDARSAGIQLDASCYEALLQ 566
L +EM ++ + Y +++KA E+ +R EV + + +GI Y L+
Sbjct: 355 LKLFEEMGVSHCIPNVVTYNTIIKALFESKSRVSEVFSWFERMKGSGISPSPFTYSILID 414
Query: 567 SKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRI 626
A+ L +EM E P + L+ + L +L QE+KE
Sbjct: 415 GFCKTNRIEKAMMLLEEMDEKGFPPCP-AAYCSLIDALGKAKRYDLACELFQELKE---- 469
Query: 627 DCGVHD---WNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYT 683
+CG + +I K + DA M LG PN ++++++G A +
Sbjct: 470 NCGSSSARVYAVMIKHLGKAGRLDDAINLFDEMSKLGCTPNVYAYNALMSGLA----RAC 525
Query: 684 EVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFIDKYKY 743
+ E M+ + D + +L + G RA E++ M+ + D Y
Sbjct: 526 MLDEALTTMRKMQEHGCLP-DINSYNIILNGLAKTGGPHRAMEMLTNMKNSTIKPDAVSY 584
Query: 744 RTLFLKYHKTLYKGKTPKFQTEAQLKKREAALGFK 778
T+ F+ A+L K ALGF+
Sbjct: 585 NTVLSAL------SHAGMFEEAAELMKEMNALGFE 613
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 92/214 (42%), Gaps = 7/214 (3%)
Query: 490 ALGHVITLCISLGWLDQAHDLLDEMHLAG-VRASSSVYASLLKAYIEANRPREVTALLRD 548
A +I + I G ++ H+L +EM G + Y++L+ A+ + R LL +
Sbjct: 196 AYNSMIIMLIHEGQYEKVHELYNEMSNEGHCHPDTVTYSALISAFCKLGRQDSAIRLLNE 255
Query: 549 ARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNH 608
+ G+Q A Y ++ + GAL LF+EM+ R + L++G +
Sbjct: 256 MKENGMQPTAKIYTMIISLFFKLDNVHGALSLFEEMRYMYC-RPDVFTYTELIRGLGK-- 312
Query: 609 EAGLMAKLLQEVKEGQRIDCGVHD--WNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQ 666
AG + + E QR DC NN+I+F K + D K + M +PN
Sbjct: 313 -AGRIDEAYHFYHEMQREDCKPDTVVMNNMINFLGKAGRLDDGLKLFEEMGVSHCIPNVV 371
Query: 667 TFHSMVTGYAAIGGKYTEVTELWGEMKSFASSTS 700
T+++++ + +EV + MK S S
Sbjct: 372 TYNTIIKALFESKSRVSEVFSWFERMKGSGISPS 405
>gi|242033891|ref|XP_002464340.1| hypothetical protein SORBIDRAFT_01g016560 [Sorghum bicolor]
gi|241918194|gb|EER91338.1| hypothetical protein SORBIDRAFT_01g016560 [Sorghum bicolor]
Length = 758
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 71/304 (23%), Positives = 128/304 (42%), Gaps = 15/304 (4%)
Query: 447 LQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHD-DAALGHVITLCISL-GWL 504
+P + Y V + G ++H L K LQ HD D + + C+S G L
Sbjct: 298 FEPDQVTYNTFVHGLCQNG---HVSHAL-KVMDLMLQEGHDPDVFTYNTVINCLSKNGEL 353
Query: 505 DQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEAL 564
D+A ++++M G ++ + +L+ A NR E L R+ G+ D + L
Sbjct: 354 DEAKGIVNQMVDRGCLPDTTTFNTLIVALSSQNRLEEALDLARELTVKGLSPDVYTFNIL 413
Query: 565 LQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQ 624
+ + D + LF+EMK S + +L+ + G LL E+ E
Sbjct: 414 INALCKVGDPHLGIRLFEEMKSSGCT-PDEVTYNILIDHLCSMGKLGNALDLLNEM-ESN 471
Query: 625 RIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTE 684
+N +I CKK +++AE+ +M + G +A TF++++ G + +
Sbjct: 472 GCPRSTVTYNTIIDALCKKMRIEEAEEVFDQMDAQGISRSAVTFNTLIDGLCK-AKRIDD 530
Query: 685 VTELWGEM-KSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFIDKYKY 743
TEL +M K ++ + +S+L + + G +A +++ M ID Y
Sbjct: 531 ATELIEQMVKEGLQPNNITY-----NSILTHYCKQGNIKKAADILETMTANGFEIDVVTY 585
Query: 744 RTLF 747
TL
Sbjct: 586 GTLI 589
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/196 (20%), Positives = 83/196 (42%), Gaps = 4/196 (2%)
Query: 478 EKENLQVSHDDAALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEAN 537
+ + V D H++ + + L + +EM G++ +L+KA A+
Sbjct: 152 DNDTFGVQADTVVFNHLLNVLVEGSKLKLLESVYNEMTGRGIQPDVVTLNTLIKALCRAH 211
Query: 538 RPREVTALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEF 597
+ R +L + S G+ D + + L+Q I + AL + +M E+ +G
Sbjct: 212 QVRTAVLMLEEMSSHGVAPDETTFTTLMQGFIEEGSIEAALRVKAKMMEAGCSPTG-VTV 270
Query: 598 EMLVKG-CAQNHEAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRM 656
+L+ G C + + QE+ +G D +N +H C+ + A K + M
Sbjct: 271 NVLINGYCKMGRVEDALGYIQQEIADGFEPDQVT--YNTFVHGLCQNGHVSHALKVMDLM 328
Query: 657 RSLGHLPNAQTFHSMV 672
GH P+ T+++++
Sbjct: 329 LQEGHDPDVFTYNTVI 344
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 60/134 (44%), Gaps = 2/134 (1%)
Query: 457 LVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQAHDLLDEMHL 516
L+ +A + + T + + KE LQ ++ ++T G + +A D+L+ M
Sbjct: 518 LIDGLCKAKRIDDATELIEQMVKEGLQ--PNNITYNSILTHYCKQGNIKKAADILETMTA 575
Query: 517 AGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQKDTPG 576
G Y +L+ +A R + LLR R GI+ Y ++QS + +
Sbjct: 576 NGFEIDVVTYGTLINGLCKAGRTQVALKLLRGMRIKGIRPTPKAYNPVIQSLFRRNNLRD 635
Query: 577 ALHLFKEMKESKIP 590
AL+LF+EM E P
Sbjct: 636 ALNLFREMTEVGEP 649
Score = 46.6 bits (109), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 41/193 (21%), Positives = 80/193 (41%), Gaps = 10/193 (5%)
Query: 504 LDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEA 563
+++A ++ D+M G+ S+ + +L+ +A R + T L+ G+Q + Y +
Sbjct: 493 IEEAEEVFDQMDAQGISRSAVTFNTLIDGLCKAKRIDDATELIEQMVKEGLQPNNITYNS 552
Query: 564 LLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEG 623
+L Q + A + + M + + L+ G + + KLL+ G
Sbjct: 553 ILTHYCKQGNIKKAADILETMTANGF-EIDVVTYGTLINGLCKAGRTQVALKLLR----G 607
Query: 624 QRIDCGVHD----WNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIG 679
RI G+ +N VI ++ ++DA + M +G P+A T+ + G
Sbjct: 608 MRIK-GIRPTPKAYNPVIQSLFRRNNLRDALNLFREMTEVGEPPDALTYKIVFRSLCRGG 666
Query: 680 GKYTEVTELWGEM 692
G E + EM
Sbjct: 667 GPIKEAFDFLVEM 679
>gi|346703131|emb|CBX25230.1| hypothetical_protein [Oryza brachyantha]
Length = 746
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 74/322 (22%), Positives = 134/322 (41%), Gaps = 23/322 (7%)
Query: 430 LGMLQKQVELITTEHGILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHD-D 488
LG +Q+++ +G +P + Y V + G + H L K +Q HD D
Sbjct: 275 LGYIQQEIA-----NG-FEPDQITYNTFVNGLCQNG---HVGHAL-KVMDVMVQEGHDPD 324
Query: 489 AALGHVITLCISL-GWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLR 547
+++ C+ G L++A +L++M G + + +L+ A NR E L R
Sbjct: 325 VFTYNIVVNCLCKNGQLEEAKGILNQMVERGCLPDITTFNTLIVALCSGNRLEEALDLAR 384
Query: 548 DARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQN 607
G+ D + L+ + D AL LF+EMK S ++ C+
Sbjct: 385 QVTLKGLSPDVYTFNILINALCKVGDPQLALRLFEEMKSSGCTPDEVTYNTLIDNLCS-- 442
Query: 608 HEAGLMAKLLQEVKEGQRIDC--GVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNA 665
G + K L +KE + C +N +I CKK +++AE+ +M G NA
Sbjct: 443 --LGKLGKALDLLKEMESAGCPRSTVTYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNA 500
Query: 666 QTFHSMVTGYAAIGGKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARAN 725
TF++++ G + + +L +M S + + +S+L + + G +A
Sbjct: 501 ITFNTLIDGLCK-DKRIDDANQLISQM----ISEGLQPNNITYNSILTHYCKQGDIKKAA 555
Query: 726 EVVAMMEEGKMFIDKYKYRTLF 747
+++ M +D Y TL
Sbjct: 556 DILQTMTANGFEVDVVTYGTLI 577
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 54/276 (19%), Positives = 111/276 (40%), Gaps = 42/276 (15%)
Query: 452 KIYIKLVKAFLEAGKTKEL----THFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQA 507
++ + +V +FLE+ ++L ++ + D H++ + + +
Sbjct: 110 QVRVGVVHSFLESYARQQLFVDAVDLVLNQLDPLFGIQADTVVYNHLLNVLVEGSKMKLL 169
Query: 508 HDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQS 567
+ EM G++ + +L+KA A++ R +L + S+G+ D + + L+Q
Sbjct: 170 ETVYSEMGERGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSSGVAPDETTFTTLMQG 229
Query: 568 KIVQKDTPGALHLFKEMKE-----------------SKIPR-------------SGHQ-- 595
+ + AL + M E K+ R +G +
Sbjct: 230 FVEEGSIKAALRVKARMLEMGCSPTKVTVNVLINGYCKLGRVEDALGYIQQEIANGFEPD 289
Query: 596 --EFEMLVKGCAQNHEAGLMAKLLQ-EVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKA 652
+ V G QN G K++ V+EG D V +N V++ CK +++A+
Sbjct: 290 QITYNTFVNGLCQNGHVGHALKVMDVMVQEGHDPD--VFTYNIVVNCLCKNGQLEEAKGI 347
Query: 653 LKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTEL 688
L +M G LP+ TF++++ + G + E +L
Sbjct: 348 LNQMVERGCLPDITTFNTLIVALCS-GNRLEEALDL 382
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 62/284 (21%), Positives = 112/284 (39%), Gaps = 13/284 (4%)
Query: 449 PTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVIT-LCISLGWLDQA 507
P E Y L+ GK + L E E+ +I LC + +++A
Sbjct: 428 PDEVTYNTLIDNLCSLGKLGKALDLL--KEMESAGCPRSTVTYNTIIDGLCKKM-RIEEA 484
Query: 508 HDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQS 567
++ D+M L G+ ++ + +L+ + R + L+ S G+Q + Y ++L
Sbjct: 485 EEVFDQMDLQGISRNAITFNTLIDGLCKDKRIDDANQLISQMISEGLQPNNITYNSILTH 544
Query: 568 KIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVK-EGQRI 626
Q D A + + M + + L+ G + + KLL+ ++ +G R
Sbjct: 545 YCKQGDIKKAADILQTMTANGF-EVDVVTYGTLINGLCKAGRTQVALKLLRGMRIKGMR- 602
Query: 627 DCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVT 686
+N VI ++ +DA + M +G P+A T+ + G GG E
Sbjct: 603 -ATPKAYNPVIQSLFRRNNTRDAMNLFREMTEVGEPPDAFTYKIVFRGLCRGGGSIREAF 661
Query: 687 ELWGEM--KSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVV 728
+ EM K F S +F +L L +F RA E++
Sbjct: 662 DFLLEMVDKGFIPEFS-SF--RMLAEGLLNLGMDDYFIRAIEII 702
>gi|224088774|ref|XP_002308534.1| predicted protein [Populus trichocarpa]
gi|222854510|gb|EEE92057.1| predicted protein [Populus trichocarpa]
Length = 567
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 65/286 (22%), Positives = 114/286 (39%), Gaps = 56/286 (19%)
Query: 449 PTEKIYIKLVKAFLEAGKTKE----LTHFLIKAEKENLQVSHDDAALGHVITLCISLGWL 504
P Y L+ + + G+ E + LI+ NL + + LC+ G +
Sbjct: 266 PDTVTYSTLIDGYCKKGELNEARKWMDGMLIRGCNPNLWTYN-----AIIYGLCLR-GNV 319
Query: 505 DQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEAL 564
D+A LL +M L GV+ + + + S+LK A + E + G++LDA +E +
Sbjct: 320 DEARRLLTKMRLNGVKENVATHLSILKGLSVAGKSEEAIGYFSEMIRKGMKLDAKEHEVV 379
Query: 565 LQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQ 624
+ + + A+ L KEM+ I RS
Sbjct: 380 ITAYCKMRKPDEAISLLKEMQAKGISRS-------------------------------- 407
Query: 625 RIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTE 684
V +N V+ + + A LK+++++G LPN ++ +++ G G+ E
Sbjct: 408 -----VGSFNAVLRILVEIGELDKAVLLLKQVKNMGCLPNLVSYSTVICGLCRSHGRMQE 462
Query: 685 VTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAM 730
V L +M D +D+ LY+ + GGF NE +AM
Sbjct: 463 VAGLVDDMLQ---------DGFEMDATLYSCLVGGFCEAGNEEMAM 499
>gi|357521009|ref|XP_003630793.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355524815|gb|AET05269.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 584
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 70/294 (23%), Positives = 123/294 (41%), Gaps = 33/294 (11%)
Query: 442 TEHGILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISL 501
TE G +PT Y LV A + + L K E+ V D +I
Sbjct: 70 TEEG-HKPTIITYTTLVAALTRLKRFNSIPSLLSKVEENG--VKPDSILFNAMINAFSDS 126
Query: 502 GWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAG-IQLDASC 560
G + +A + +M G + ++S + +L+K + RP E LL G ++ +
Sbjct: 127 GKVHEAMKIFRKMKECGCKPTTSTFNTLIKGFGIVGRPHEAMKLLEMMIQDGNVKPNERT 186
Query: 561 YEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLL--- 617
Y L+Q+ + + A ++ +M S + + + L + AQN E +L+
Sbjct: 187 YNILIQAWCTKNELEEAWNVMHKMVNSGM-QPDIVTYNTLARAFAQNGETDNAERLILKM 245
Query: 618 ----QEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVT 673
+VK +R CG+ +I +CK+ M +A + L +M+ LG PN F+S++
Sbjct: 246 QQYNNKVKPNERT-CGI-----IIRGYCKEGNMTEALRFLYKMKELGVHPNPVVFNSLIK 299
Query: 674 GYAAIG---------------GKYTEVTELWGEMKSFASSTSMNFDEELLDSVL 712
GY I G +V M +++SS M+ EE+ D ++
Sbjct: 300 GYLDITDTDGVEEALTLMEEFGIKPDVVTYSTIMNAWSSSGLMDNCEEIFDDMV 353
Score = 59.7 bits (143), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 50/230 (21%), Positives = 98/230 (42%), Gaps = 2/230 (0%)
Query: 447 LQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQ 506
+QP Y L +AF + G+T ++K ++ N +V ++ G +I G + +
Sbjct: 215 MQPDIVTYNTLARAFAQNGETDNAERLILKMQQYNNKVKPNERTCGIIIRGYCKEGNMTE 274
Query: 507 AHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQ 566
A L +M GV + V+ SL+K Y++ V L GI+ D Y ++
Sbjct: 275 ALRFLYKMKELGVHPNPVVFNSLIKGYLDITDTDGVEEALTLMEEFGIKPDVVTYSTIMN 334
Query: 567 SKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRI 626
+ +F +M +++I Q + +L KG + + LL + + +
Sbjct: 335 AWSSSGLMDNCEEIFDDMVKAEI-EPDIQAYSILAKGYVRAGQPDKAEALLNSMTK-YGL 392
Query: 627 DCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYA 676
V + +I +C M A + ++M +G N +T+ +++ GY
Sbjct: 393 QANVVIFTTIISGWCAAGKMDCALRLYEKMNEMGTPLNLKTYETLIWGYG 442
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 79/374 (21%), Positives = 141/374 (37%), Gaps = 60/374 (16%)
Query: 250 KPNTNTFNIALAGCLLFETTRKAEQLLDIMPRIG-VKADSNLLIIMAHIYERNGRREELR 308
KP T+TFN + G + +A +LL++M + G VK + I+ + EE
Sbjct: 145 KPTTSTFNTLIKGFGIVGRPHEAMKLLEMMIQDGNVKPNERTYNILIQAWCTKNELEEAW 204
Query: 309 KLQRHIDEAVNLSDIQFRQFYNCLLSCHLKFGDLNSASKMVLEMLQRAKEARNSLAAAML 368
+ + + DI YN L + G+ ++A +++L+M Q
Sbjct: 205 NVMHKMVNSGMQPDIVT---YNTLARAFAQNGETDNAERLILKMQQYN------------ 249
Query: 369 PFNAVGVNNRTPSEQNVNCTNSVDLENSGIIENHILSYEDFTKDRKFVALEAEVKRVLQT 428
N V N RT GII + T+ +F
Sbjct: 250 --NKVKPNERT----------------CGIIIRGYCKEGNMTEALRF------------- 278
Query: 429 LLGMLQKQVELITTEHGILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDD 488
L K EL G+ P ++ L+K +L+ T + L E+ + D
Sbjct: 279 ----LYKMKEL-----GV-HPNPVVFNSLIKGYLDITDTDGVEEALTLMEE--FGIKPDV 326
Query: 489 AALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRD 548
++ S G +D ++ D+M A + Y+ L K Y+ A +P + ALL
Sbjct: 327 VTYSTIMNAWSSSGLMDNCEEIFDDMVKAEIEPDIQAYSILAKGYVRAGQPDKAEALLNS 386
Query: 549 ARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNH 608
G+Q + + ++ AL L+++M E P + + +E L+ G +
Sbjct: 387 MTKYGLQANVVIFTTIISGWCAAGKMDCALRLYEKMNEMGTPLN-LKTYETLIWGYGEAK 445
Query: 609 EAGLMAKLLQEVKE 622
+ +LL ++E
Sbjct: 446 QPWKAEELLVTMEE 459
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/189 (20%), Positives = 85/189 (44%), Gaps = 7/189 (3%)
Query: 494 VITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAG 553
+++ I G +A + + + G + + Y +L+ A R + +LL G
Sbjct: 49 LMSTLIRKGKPHEAVTIFNSLTEEGHKPTIITYTTLVAALTRLKRFNSIPSLLSKVEENG 108
Query: 554 IQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKG---CAQNHEA 610
++ D+ + A++ + A+ +F++MKE + F L+KG + HEA
Sbjct: 109 VKPDSILFNAMINAFSDSGKVHEAMKIFRKMKECGC-KPTTSTFNTLIKGFGIVGRPHEA 167
Query: 611 GLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHS 670
KLL+ + + + +N +I +C K +++A + +M + G P+ T+++
Sbjct: 168 ---MKLLEMMIQDGNVKPNERTYNILIQAWCTKNELEEAWNVMHKMVNSGMQPDIVTYNT 224
Query: 671 MVTGYAAIG 679
+ +A G
Sbjct: 225 LARAFAQNG 233
>gi|168049795|ref|XP_001777347.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162671323|gb|EDQ57877.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 621
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 95/432 (21%), Positives = 167/432 (38%), Gaps = 43/432 (9%)
Query: 329 YNCLLSCHLKFGDLNSASKMVLEMLQRAKEARNSLAAAMLPFNAVGVNNRTPSEQNVNCT 388
YN L+ C K G + A +++ EM N P + NC
Sbjct: 82 YNTLVDCLGKAGQFDEALRLLAEMRD---------------------NGCVPDVRTYNCL 120
Query: 389 NSVDLENSGIIENHILSYEDFTKDRKFVALEAEVKRVLQTL--LGMLQKQVELI--TTEH 444
S L +G + + + ++R V ++ L +G QK +EL+ H
Sbjct: 121 IST-LGKAGRLSEAFTLFAEM-RERGCVPDTFTYNSLIYGLGKVGRSQKAMELLEEMERH 178
Query: 445 GILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWL 504
G P Y L+ + G+T + F + E + D ++ G +
Sbjct: 179 GC-PPDVMTYSSLITGLGKDGET--VKAFKLFQEMKRRGRKPDSITFTALMDALGKAGRV 235
Query: 505 DQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEAL 564
D A +LLDEM GV+ Y +L+ + + E LL + + G + D Y L
Sbjct: 236 DDALELLDEMKERGVKPGVVTYNALIAGFGKVGDLVEAYNLLDEMKRNGCKPDVVTYSCL 295
Query: 565 LQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLM---AKLLQEVK 621
+ I A + K+M++ P + L+ G + AGL+ +L +K
Sbjct: 296 ITGLIKASQLDEACQVLKKMEKEGCPPD-TITYNTLINGLGK---AGLLNDAGRLFDRMK 351
Query: 622 EGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGK 681
+ + V ++ +I K ++ A + M S+G P+ T+ S++T G+
Sbjct: 352 S-KGCNPDVVTYSTLITALGKAARVESACVLFEEMESVGIQPDLFTYCSIIT-VLGKAGQ 409
Query: 682 YTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFIDKY 741
+ L+ EM+ ++ D ++ L + RGG F A ++ M+E + D
Sbjct: 410 VDDADRLFSEMR----GKGLSPDVITYNAFLNSLGRGGRFKEARKIFEDMKESGLLPDVA 465
Query: 742 KYRTLFLKYHKT 753
Y L L KT
Sbjct: 466 TYDALLLGLSKT 477
Score = 56.2 bits (134), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 87/435 (20%), Positives = 161/435 (37%), Gaps = 39/435 (8%)
Query: 251 PNTNTFNIALAGCLLFETTRKAEQLLDIMPRIGVKADSNLLIIMAHIYERNGRREELRKL 310
P+ T++ + G T KA +L M R G K DS + + GR ++ +L
Sbjct: 182 PDVMTYSSLITGLGKDGETVKAFKLFQEMKRRGRKPDSITFTALMDALGKAGRVDDALEL 241
Query: 311 QRHIDE-AVNLSDIQFRQFYNCLLSCHLKFGDLNSASKMVLEMLQRAKEARNSLAAAMLP 369
+ E V + YN L++ K GDL A ++ EM RN ++
Sbjct: 242 LDEMKERGVKPGVVT----YNALIAGFGKVGDLVEAYNLLDEM------KRNGCKPDVVT 291
Query: 370 FNAVGVNNRTPSEQNVNCTNSVDLENSGIIENHILSYEDFTKDRKFVALEAEVKRVLQTL 429
++ + S+ + C +E G + I +Y L + R+ +
Sbjct: 292 YSCLITGLIKASQLDEACQVLKKMEKEGCPPDTI-TYNTLINGLGKAGLLNDAGRLFDRM 350
Query: 430 LGMLQKQVELITTEHGILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDA 489
+ P Y L+ A +A + + + ++ E E++ + D
Sbjct: 351 -------------KSKGCNPDVVTYSTLITALGKAARVE--SACVLFEEMESVGIQPDLF 395
Query: 490 ALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDA 549
+IT+ G +D A L EM G+ Y + L + R +E + D
Sbjct: 396 TYCSIITVLGKAGQVDDADRLFSEMRGKGLSPDVITYNAFLNSLGRGGRFKEARKIFEDM 455
Query: 550 RSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSG---HQEFEMLVK--GC 604
+ +G+ D + Y+ALL K+ A L KE+ E + E+L
Sbjct: 456 KESGLLPDVATYDALLLGLSKTKEVDDACGLLKELIEQGCAFDSLKFDECLEILTSWGNV 515
Query: 605 AQNHEAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPN 664
+ HE L + + + G +N +I K + +A L+ ++ G P+
Sbjct: 516 DEAHE-------LLQFANSKGLWPGASSYNALIDALAKAGRVSEAFNTLEDLKEQGGKPD 568
Query: 665 AQTFHSMVTGYAAIG 679
++ S+++ G
Sbjct: 569 IVSYSSLISALGQTG 583
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 92/228 (40%), Gaps = 6/228 (2%)
Query: 448 QPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQA 507
+P Y LV +AG+ E L AE + D +I+ G L +A
Sbjct: 76 KPNLWTYNTLVDCLGKAGQFDEALRLL--AEMRDNGCVPDVRTYNCLISTLGKAGRLSEA 133
Query: 508 HDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQS 567
L EM G + Y SL+ + R ++ LL + G D Y +L+
Sbjct: 134 FTLFAEMRERGCVPDTFTYNSLIYGLGKVGRSQKAMELLEEMERHGCPPDVMTYSSLITG 193
Query: 568 KIVQKDTPGALHLFKEMK-ESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRI 626
+T A LF+EMK + P S F L+ + +LL E+KE + +
Sbjct: 194 LGKDGETVKAFKLFQEMKRRGRKPDS--ITFTALMDALGKAGRVDDALELLDEMKE-RGV 250
Query: 627 DCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTG 674
GV +N +I F K + +A L M+ G P+ T+ ++TG
Sbjct: 251 KPGVVTYNALIAGFGKVGDLVEAYNLLDEMKRNGCKPDVVTYSCLITG 298
Score = 41.6 bits (96), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 92/379 (24%), Positives = 150/379 (39%), Gaps = 55/379 (14%)
Query: 248 AMKPNTNTFNIALAGCLLFETTRKAEQLLDIMPRIGVKAD----SNLLIIMAHIYERNGR 303
+KP T+N +AG +A LLD M R G K D S L+ + + +
Sbjct: 249 GVKPGVVTYNALIAGFGKVGDLVEAYNLLDEMKRNGCKPDVVTYSCLITGLIKASQLDEA 308
Query: 304 REELRKLQRHIDEAVNLSDIQFRQFYNCLLSCHLKFGDLNSASKMVLEMLQRAKEARNSL 363
+ L+K+++ ++ YN L++ K G LN A ++ M ++K +
Sbjct: 309 CQVLKKMEKEGCPPDTIT-------YNTLINGLGKAGLLNDAGRLFDRM--KSKGCNPDV 359
Query: 364 AAAMLPFNAVGVNNRTPSEQNVNCTNSVDLENSGIIENHILSYEDFTK-----------D 412
A+G R S C ++E+ GI + + +Y D
Sbjct: 360 VTYSTLITALGKAARVESA----CVLFEEMESVGI-QPDLFTYCSIITVLGKAGQVDDAD 414
Query: 413 RKFVALEAE--------VKRVLQTL-LGMLQKQVELI---TTEHGILQPTEKIYIKLVKA 460
R F + + L +L G K+ I E G+L P Y L+
Sbjct: 415 RLFSEMRGKGLSPDVITYNAFLNSLGRGGRFKEARKIFEDMKESGLL-PDVATYDALL-- 471
Query: 461 FLEAGKTKELTHF--LIKAEKENLQVSHDDAALGHVITLCISLGWLDQAHDLLDEMHLAG 518
L KTKE+ L+K E + D + + S G +D+AH+LL + G
Sbjct: 472 -LGLSKTKEVDDACGLLKELIEQ-GCAFDSLKFDECLEILTSWGNVDEAHELLQFANSKG 529
Query: 519 VRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQS--KIVQKDTPG 576
+ +S Y +L+ A +A R E L D + G + D Y +L+ + + Q DT
Sbjct: 530 LWPGASSYNALIDALAKAGRVSEAFNTLEDLKEQGGKPDIVSYSSLISALGQTGQIDT-- 587
Query: 577 ALHLFKEMKESKI---PRS 592
A L +EM + + PRS
Sbjct: 588 AFELLEEMSKRGLKLSPRS 606
>gi|356528166|ref|XP_003532676.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g02150-like [Glycine max]
Length = 852
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 86/361 (23%), Positives = 145/361 (40%), Gaps = 44/361 (12%)
Query: 329 YNCLLSCHLKFGDLNSASKMVLEMLQRAKEARNSLAAAMLPFNAVGVNNRTPSEQNVNCT 388
YN ++ C + GDL +A + EM +AK R + + G +V
Sbjct: 254 YNMVIGCLAREGDLEAARSLFEEM--KAKGLRPDIVTYNSLIDGYGKVGMLTGAVSV--- 308
Query: 389 NSVDLENSGIIENHILSYEDFTKDRKFVALEAEVKRVLQTLLGMLQKQVELITTEHGILQ 448
+++++G E +++Y F E + + + L GM Q+ LQ
Sbjct: 309 -FEEMKDAG-CEPDVITYNSLIN--CFCKFE-RIPQAFEYLHGMKQRG----------LQ 353
Query: 449 PTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQAH 508
P Y L+ AF +AG E F + + LQ ++ +I +G L++A
Sbjct: 354 PNVVTYSTLIDAFCKAGMLLEANKFFVDMIRVGLQ--PNEFTYTSLIDANCKIGDLNEAF 411
Query: 509 DLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSK 568
L EM AGV + Y +LL E R RE L AG L+ Y +L
Sbjct: 412 KLESEMQQAGVNLNIVTYTALLDGLCEDGRMREAEELFGALLKAGWTLNQQIYTSLFHGY 471
Query: 569 IVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKG------CAQNHEAGLMAKLLQEVKE 622
I K A+ + +EM + + ++L+ G C QN MA +++E+
Sbjct: 472 IKAKMMEKAMDILEEMNKKNLKP------DLLLYGTKIWGLCRQNEIEDSMA-VIREM-- 522
Query: 623 GQRIDCGV----HDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAI 678
+DCG+ + + +I + K +A L+ M+ LG T+ ++ G I
Sbjct: 523 ---MDCGLTANSYIYTTLIDAYFKVGKTTEAVNLLQEMQDLGIKITVVTYGVLIDGLCKI 579
Query: 679 G 679
G
Sbjct: 580 G 580
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 81/361 (22%), Positives = 136/361 (37%), Gaps = 59/361 (16%)
Query: 440 ITTEHGILQPTEKIYIKL--VKAFLEAGKTKELTHFLIKAEKENLQVSH--DDAALG--- 492
+ + G+L+ + + K+ + + EL H L K+ K L +S D G
Sbjct: 190 VLVDLGMLEEARQCFWKMNKFRVLPKVRSCNELLHRLSKSSKGGLALSFFKDMVVAGLSP 249
Query: 493 -----HVITLCISL-GWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALL 546
+++ C++ G L+ A L +EM G+R Y SL+ Y + ++
Sbjct: 250 SVFTYNMVIGCLAREGDLEAARSLFEEMKAKGLRPDIVTYNSLIDGYGKVGMLTGAVSVF 309
Query: 547 RDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQ 606
+ + AG + D Y +L+ K +IP Q FE L
Sbjct: 310 EEMKDAGCEPDVITYNSLINCFC---------------KFERIP----QAFEYL------ 344
Query: 607 NHEAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQ 666
G+ + LQ V ++ +I FCK ++ +A K M +G PN
Sbjct: 345 ---HGMKQRGLQP---------NVVTYSTLIDAFCKAGMLLEANKFFVDMIRVGLQPNEF 392
Query: 667 TFHSMVTGYAAIGGKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANE 726
T+ S++ I G E +L EM+ + ++ LLD + G A E
Sbjct: 393 TYTSLIDANCKI-GDLNEAFKLESEMQQAGVNLNIVTYTALLDGL----CEDGRMREAEE 447
Query: 727 VVAMMEEGKMFIDKYKYRTLFLKYHKTLYKGKTPKFQTEAQLKKREAAL---GFKKWLGL 783
+ + + +++ Y +LF Y K K E K + L G K W GL
Sbjct: 448 LFGALLKAGWTLNQQIYTSLFHGYIKAKMMEKAMDILEEMNKKNLKPDLLLYGTKIW-GL 506
Query: 784 C 784
C
Sbjct: 507 C 507
Score = 42.0 bits (97), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 45/251 (17%), Positives = 105/251 (41%), Gaps = 11/251 (4%)
Query: 504 LDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEA 563
+++A D+L+EM+ ++ +Y + + N + A++R+ G+ ++ Y
Sbjct: 477 MEKAMDILEEMNKKNLKPDLLLYGTKIWGLCRQNEIEDSMAVIREMMDCGLTANSYIYTT 536
Query: 564 LLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEG 623
L+ + T A++L +EM++ I + + +L+ G + GL+ + ++
Sbjct: 537 LIDAYFKVGKTTEAVNLLQEMQDLGI-KITVVTYGVLIDGLCK---IGLVQQAVRYFDHM 592
Query: 624 QR--IDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGK 681
R + + + +I CK +++A+ M G P+ + S++ G G
Sbjct: 593 TRNGLQPNIMIYTALIDGLCKNDCLEEAKNLFNEMLDKGISPDKLVYTSLIDGNMKHGNP 652
Query: 682 YTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFIDKY 741
++ +++ M D S+++ F R G A ++ M + D+
Sbjct: 653 GEALS-----LRNRMVEIGMELDLCAYTSLIWGFSRYGQVQLAKSLLDEMLRKGIIPDQV 707
Query: 742 KYRTLFLKYHK 752
L KY++
Sbjct: 708 LCICLLRKYYE 718
>gi|297820746|ref|XP_002878256.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297324094|gb|EFH54515.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 582
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 60/232 (25%), Positives = 106/232 (45%), Gaps = 10/232 (4%)
Query: 448 QPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHV-ITLCISLGWLDQ 506
+P+ Y ++K F+E K KE E D + H+ I + G D+
Sbjct: 206 EPSAVTYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYDK 265
Query: 507 AHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQ 566
A + M GV S+ Y SL+ E N +EV+ + + +GIQ D Y L++
Sbjct: 266 ARKVFSSMVGKGVPQSTVTYNSLMS--FETNY-KEVSKIYDQMQRSGIQPDVVSYALLIK 322
Query: 567 SKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLM--AKLLQEVKEGQ 624
+ + AL +F+EM ++ + R H+ + +L+ A +G++ AK + +
Sbjct: 323 AYGRARREEEALSVFEEMLDAGV-RPTHKAYNILLDAFAI---SGMVEQAKTVFKSMRRD 378
Query: 625 RIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYA 676
RI + + ++ + M+ AEK KR++ G PN T+ +M+ GYA
Sbjct: 379 RIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTMIKGYA 430
Score = 44.3 bits (103), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 49/267 (18%), Positives = 111/267 (41%), Gaps = 29/267 (10%)
Query: 326 RQFYNCLLSCHLKFGDLNSASKMVLEMLQRAKEARNSLAAAMLPFNAVGVNNRTPSEQNV 385
++ Y+ ++ + K G+ + A K+ M+ + +P + V N+ E N
Sbjct: 247 QKMYHMMIYMYKKAGNYDKARKVFSSMVGKG-----------VPQSTVTYNSLMSFETNY 295
Query: 386 NCTNSV--DLENSGIIENHILSYEDFTKDRKFVALEAEVKRVLQTLLGMLQKQVELITTE 443
+ + ++ SGI + ++SY K E E V + +L +
Sbjct: 296 KEVSKIYDQMQRSGI-QPDVVSYALLIKAYGRARREEEALSVFEEML------------D 342
Query: 444 HGILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGW 503
G+ +PT K Y L+ AF +G ++ ++ ++ D + +++ ++
Sbjct: 343 AGV-RPTHKAYNILLDAFAISGMVEQAKTVFKSMRRD--RIFPDLWSYTTMLSAYVNASD 399
Query: 504 LDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEA 563
++ A + + G + Y +++K Y +AN ++ + R +GI+ + +
Sbjct: 400 MEGAEKFFKRIKVDGFEPNIVTYGTMIKGYAKANDVEKMMEVYEKMRLSGIKANQTILTT 459
Query: 564 LLQSKIVQKDTPGALHLFKEMKESKIP 590
++ + KD AL +KEM+ +P
Sbjct: 460 IMDASGRCKDFGSALGWYKEMESCGVP 486
>gi|222636287|gb|EEE66419.1| hypothetical protein OsJ_22769 [Oryza sativa Japonica Group]
Length = 1393
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 68/324 (20%), Positives = 126/324 (38%), Gaps = 17/324 (5%)
Query: 431 GMLQKQVELITTEHGILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAA 490
G L + V L+ P Y L++ + +E H+L + N DD
Sbjct: 235 GRLPEAVRLVDGMRAYAVPDVVTYNTLIRGLCKKSMPQEAMHYLRRMM--NQGCLPDDFT 292
Query: 491 LGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDAR 550
+I + + +A +LL + G Y SL+ L +A+
Sbjct: 293 YNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQ 352
Query: 551 SAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKG-CAQNHE 609
+ GI+ D Y +L++ +Q AL + EM E Q + +++ G C +
Sbjct: 353 AKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGC-HPDIQTYNIVINGLCKMGNI 411
Query: 610 AGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFH 669
+ + + +G D V +N +I +CK+ + A + ++RM G P+ T++
Sbjct: 412 SDATVVMNDAIMKGYLPD--VFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYN 469
Query: 670 SMVTGYAAIGGKYTEVTELWGEM---KSFASSTSMNFDEELLDSVLYTFVRGGFFARANE 726
S++ G GK EV E + EM + + N ++ F R A++
Sbjct: 470 SVLNGLCK-AGKVNEVNETFQEMILKGCHPNPITYNI-------LIENFCRSNKMEEASK 521
Query: 727 VVAMMEEGKMFIDKYKYRTLFLKY 750
V+ M + + D + TL +
Sbjct: 522 VIVKMSQEGLHPDAVSFNTLIYGF 545
Score = 46.2 bits (108), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 73/342 (21%), Positives = 135/342 (39%), Gaps = 44/342 (12%)
Query: 430 LGMLQKQVELITTE--HGILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQ---V 484
+ M+Q+ EL+ G + P + Y L+ G + +A+ + ++ V
Sbjct: 303 ISMVQEATELLKDAVFKGFV-PDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIV 361
Query: 485 SHDDAALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTA 544
++ G LC+ G + A +++EM G Y ++ + + T
Sbjct: 362 VYNSLVKG----LCLQ-GLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATV 416
Query: 545 LLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGC 604
++ DA G D + L+ + AL L + M E I + ++ G
Sbjct: 417 VMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDT-ITYNSVLNGL 475
Query: 605 AQNHEAGLMAKLLQEVKEGQRIDCGVH----DWNNVIHFFCKKRLMQDAEKALKRMRSLG 660
+ + + + QE+ I G H +N +I FC+ M++A K + +M G
Sbjct: 476 CKAGKVNEVNETFQEM-----ILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEG 530
Query: 661 HLPNAQTFHSMVTGYAAIG---GKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVR 717
P+A +F++++ G+ G G Y +L E K + S+T+ F+ +
Sbjct: 531 LHPDAVSFNTLIYGFCRNGDLEGAYLLFQKL--EEKGY-SATADTFNTLI---------- 577
Query: 718 GGFFARANEVVA------MMEEGKMFIDKYKYRTLFLKYHKT 753
G F + N +A M+ +G D Y YR L KT
Sbjct: 578 GAFSGKLNMHMAEKIFDEMLSKGHR-ADSYTYRVLIDGSCKT 618
>gi|413922833|gb|AFW62765.1| hypothetical protein ZEAMMB73_408366 [Zea mays]
Length = 820
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 83/350 (23%), Positives = 139/350 (39%), Gaps = 32/350 (9%)
Query: 412 DRKFVALEAEVKRVLQTLLGMLQKQVELITTEHGILQPTEKIYIKLVKAFLEAGKTKELT 471
DR F +L R T L ML+ + H PT Y L++A +
Sbjct: 93 DRPFRSLLTHFSRYALTPL-MLRLFAHMY--RHAPPAPTGATYNALIRALCRRADLRHAQ 149
Query: 472 HFL---IKAEKENLQVSHDDAALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYAS 528
+L +++ + + LG+ T L+ AHDL +M G + YA+
Sbjct: 150 RYLSLMVRSGWRPDAFTFNSLILGYCRT-----QQLEVAHDLFCKMPFRGFSQDAVSYAA 204
Query: 529 LLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESK 588
L++ + EA R E L R+ Q D + AL++ L + ++MKE
Sbjct: 205 LIEGFCEAGRIDEALELFREM----TQPDMYTHAALVKGLCDAGRGEEGLCMLQKMKELG 260
Query: 589 IPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQD 648
R + + LV + +A K+L E+ + + C V V++ +C++ M
Sbjct: 261 W-RPTTRAYAALVDLWCREQKAEEAEKILNEMFDSGLMPC-VVTCTIVVNAYCREGRMSG 318
Query: 649 AEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEMKSFASSTSMNFDEELL 708
A + + MR G PN T++++V G+ GK + L +M+
Sbjct: 319 AVRVFESMRFKGCEPNVWTYNAIVQGFCN-AGKVYKAMALLDQMRECGVEP--------- 368
Query: 709 DSVLYT-FVRG----GFFARANEVVAMMEEGKMFIDKYKYRTLFLKYHKT 753
D V Y +RG G A ++ +ME + D+Y Y L KT
Sbjct: 369 DVVTYNLLIRGQCIDGHIGSAFRLLRLMEGNGLAADQYTYNVLIDALCKT 418
Score = 52.8 bits (125), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 112/524 (21%), Positives = 198/524 (37%), Gaps = 92/524 (17%)
Query: 250 KPNTNTFNIALAGCLLFETTRKAEQLLDIMPRIGVKADS---NLLIIMAHIYERNGRREE 306
+PN T+N + G KA LLD M GV+ D NLLI I G
Sbjct: 332 EPNVWTYNAIVQGFCNAGKVYKAMALLDQMRECGVEPDVVTYNLLIRGQCIDGHIGSAFR 391
Query: 307 LRKLQRHIDEAVNLSDIQFRQFYNCLLSCHLKFGDLNSASKMVLEMLQRAKEARNSLAAA 366
L +L E L+ Q+ YN L+ K G ++ A + + L+ NS+
Sbjct: 392 LLRLM----EGNGLAADQYT--YNVLIDALCKTGKVDEACSL-FDGLEYRGIRPNSVT-- 442
Query: 367 MLPFNAVGVNNRTPSEQNVNCTNSVDLENSGIIENHILSYEDFTKDRKFVALEAEVKRVL 426
FN V + +V CT ++ ++G + +Y F ++ + + L
Sbjct: 443 ---FNTVINGLCKAGKFDVACTFLENMISAGYAPD-TYTYSPFIEN---LCKTKGSQEGL 495
Query: 427 QTLLGMLQKQVELITTEHGIL-------------------------QPTEKIYIKLVKAF 461
+ MLQK V+ T + I+ P Y V+A+
Sbjct: 496 FFIDEMLQKDVKPSTVNYTIVINRLFNERNYGLATRIWGQMVSQGCSPDVVTYTTSVRAY 555
Query: 462 LEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQAHDLLDEMHLAGVRA 521
G+ E + + + +K V D A +I S+G D+A +L H+ GV +
Sbjct: 556 CNEGRLDEAENVVTEMKKCRTIV--DAMAYNTLIDGHTSIGQTDRAVTILK--HMTGVAS 611
Query: 522 SSSVYASLLKAYIEA------NRPREVTALLRDARSAGIQLDASCYEALLQSKIVQKDTP 575
+ + + + P + T++ + A +
Sbjct: 612 MPNHFTFFILLRHLLQRRLAEHVPLKATSVWKTIELADV--------------------- 650
Query: 576 GALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRIDCGVHDWNN 635
LF+ MK++ +P S +L +G ++ + L+ +KE + + +N
Sbjct: 651 --FELFELMKKNSVPSSARTYLSIL-EGFSEERRLDEVTSLVSLMKE-ENLPLNEDIYNA 706
Query: 636 VIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIG----GKYTEVTELWGE 691
+++ FCK R+ DA L M G LPN + +++G A G K + W E
Sbjct: 707 LVNCFCKLRMYSDAWALLCSMIGHGFLPNLIFYQYLLSGLTAEGQADRAKEIFRSSRWKE 766
Query: 692 MKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGK 735
N DE + ++ F+R G +++++M+E+ K
Sbjct: 767 ---------YNTDEIVWKVIIDGFIRKGHADMCHDMISMLEQMK 801
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/232 (21%), Positives = 94/232 (40%), Gaps = 4/232 (1%)
Query: 448 QPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQA 507
QP + LVK +AG+ +E L K ++ L A ++ L ++A
Sbjct: 227 QPDMYTHAALVKGLCDAGRGEEGLCMLQKMKE--LGWRPTTRAYAALVDLWCREQKAEEA 284
Query: 508 HDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQS 567
+L+EM +G+ ++ AY R + R G + + Y A++Q
Sbjct: 285 EKILNEMFDSGLMPCVVTCTIVVNAYCREGRMSGAVRVFESMRFKGCEPNVWTYNAIVQG 344
Query: 568 KIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRID 627
A+ L +M+E + + +L++G + G +LL+ + EG +
Sbjct: 345 FCNAGKVYKAMALLDQMRECGV-EPDVVTYNLLIRGQCIDGHIGSAFRLLR-LMEGNGLA 402
Query: 628 CGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIG 679
+ +N +I CK + +A + G PN+ TF++++ G G
Sbjct: 403 ADQYTYNVLIDALCKTGKVDEACSLFDGLEYRGIRPNSVTFNTVINGLCKAG 454
>gi|218198940|gb|EEC81367.1| hypothetical protein OsI_24568 [Oryza sativa Indica Group]
Length = 1380
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 68/324 (20%), Positives = 126/324 (38%), Gaps = 17/324 (5%)
Query: 431 GMLQKQVELITTEHGILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAA 490
G L + V L+ P Y L++ + +E H+L + N DD
Sbjct: 236 GRLPEAVRLVDGMRAYAVPDVVTYNTLIRGLCKKSMPQEAMHYLRRMM--NQGCLPDDFT 293
Query: 491 LGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDAR 550
+I + + +A +LL + G Y SL+ L +A+
Sbjct: 294 YNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQ 353
Query: 551 SAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKG-CAQNHE 609
+ GI+ D Y +L++ +Q AL + EM E Q + +++ G C +
Sbjct: 354 AKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGC-HPDIQTYNIVINGLCKMGNI 412
Query: 610 AGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFH 669
+ + + +G D V +N +I +CK+ + A + ++RM G P+ T++
Sbjct: 413 SDATVVMNDAIMKGYLPD--VFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYN 470
Query: 670 SMVTGYAAIGGKYTEVTELWGEM---KSFASSTSMNFDEELLDSVLYTFVRGGFFARANE 726
S++ G GK EV E + EM + + N ++ F R A++
Sbjct: 471 SVLNGLCK-AGKVNEVNETFQEMILKGCHPNPITYNI-------LIENFCRSNKMEEASK 522
Query: 727 VVAMMEEGKMFIDKYKYRTLFLKY 750
V+ M + + D + TL +
Sbjct: 523 VIVKMSQEGLHPDAVSFNTLIYGF 546
Score = 45.8 bits (107), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 73/342 (21%), Positives = 135/342 (39%), Gaps = 44/342 (12%)
Query: 430 LGMLQKQVELITTE--HGILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQ---V 484
+ M+Q+ EL+ G + P + Y L+ G + +A+ + ++ V
Sbjct: 304 ISMVQEATELLKDAVFKGFV-PDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIV 362
Query: 485 SHDDAALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTA 544
++ G LC+ G + A +++EM G Y ++ + + T
Sbjct: 363 VYNSLVKG----LCLQ-GLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATV 417
Query: 545 LLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGC 604
++ DA G D + L+ + AL L + M E I + ++ G
Sbjct: 418 VMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDT-ITYNSVLNGL 476
Query: 605 AQNHEAGLMAKLLQEVKEGQRIDCGVH----DWNNVIHFFCKKRLMQDAEKALKRMRSLG 660
+ + + + QE+ I G H +N +I FC+ M++A K + +M G
Sbjct: 477 CKAGKVNEVNETFQEM-----ILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEG 531
Query: 661 HLPNAQTFHSMVTGYAAIG---GKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVR 717
P+A +F++++ G+ G G Y +L E K + S+T+ F+ +
Sbjct: 532 LHPDAVSFNTLIYGFCRNGDLEGAYLLFQKL--EEKGY-SATADTFNTLI---------- 578
Query: 718 GGFFARANEVVA------MMEEGKMFIDKYKYRTLFLKYHKT 753
G F + N +A M+ +G D Y YR L KT
Sbjct: 579 GAFSGKLNMHMAEKIFDEMLSKGHR-ADSYTYRVLIDGSCKT 619
>gi|326491875|dbj|BAJ98162.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 628
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 75/338 (22%), Positives = 131/338 (38%), Gaps = 22/338 (6%)
Query: 444 HGILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGW 503
H +P Y +L++ +AG+ E +F + +E + D + ++I G
Sbjct: 289 HQYCRPDVFTYTELIRGLGKAGRLDEAYNFFHEMRREGCR--PDTVLMNNMINFLGKAGR 346
Query: 504 LDQAHDLLDEMHLAGVRASSSVYASLLKAYIEA-NRPREVTALLRDARSAGIQLDASCYE 562
LD A L +EM S Y +++KA E+ +R E+++ + +GI Y
Sbjct: 347 LDDAIKLFEEMETLRCIPSVVTYNTIIKALFESKSRVSEISSWFERMKGSGISPSPFTYS 406
Query: 563 ALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKE 622
L+ T A+ L +EM E P + L+ + L +L QE+KE
Sbjct: 407 ILIDGFCKTNRTEKAMMLLEEMDEKGFPPC-PAAYCSLIDALGKAKRYDLANELFQELKE 465
Query: 623 GQRIDCGVHD---WNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIG 679
+CG + +I K + DA M LG PN ++++++G A
Sbjct: 466 ----NCGSSSARVYAVMIKHLGKAGRLDDAVDLFDEMNRLGCTPNVYAYNALMSGLAR-A 520
Query: 680 GKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFID 739
G E M+ +N + +L + G RA ++ M++ + D
Sbjct: 521 GMLDEALTTMRRMQDHGCIPDINS----YNIILNALAKTGGPDRAMGMLCNMKQSAIKPD 576
Query: 740 KYKYRTLFLKYHKTLYKGKTPKFQTEAQLKKREAALGF 777
Y T+ F+ A+L K A+GF
Sbjct: 577 AVSYNTVLGAL------SHAGMFEEAAKLMKEMNAIGF 608
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 97/213 (45%), Gaps = 5/213 (2%)
Query: 490 ALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSV-YASLLKAYIEANRPREVTALLRD 548
A +I + + G ++ H+L +EM G +V Y++L+ A+ + R LL +
Sbjct: 192 AYNSMIIMLMHEGEYEKVHELYNEMSNEGQCFPDTVTYSALISAFCKLGRQDSAIWLLNE 251
Query: 549 ARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNH 608
+ G+Q A Y L+ + GAL LF+EM+ + R + L++G +
Sbjct: 252 MKDNGMQPTAKIYTMLMALLFKLDNVHGALGLFEEMRH-QYCRPDVFTYTELIRGLGKAG 310
Query: 609 EAGLMAKLLQEV-KEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQT 667
E+ +EG R D + NN+I+F K + DA K + M +L +P+ T
Sbjct: 311 RLDEAYNFFHEMRREGCRPDTVL--MNNMINFLGKAGRLDDAIKLFEEMETLRCIPSVVT 368
Query: 668 FHSMVTGYAAIGGKYTEVTELWGEMKSFASSTS 700
+++++ + +E++ + MK S S
Sbjct: 369 YNTIIKALFESKSRVSEISSWFERMKGSGISPS 401
>gi|242055005|ref|XP_002456648.1| hypothetical protein SORBIDRAFT_03g040130 [Sorghum bicolor]
gi|241928623|gb|EES01768.1| hypothetical protein SORBIDRAFT_03g040130 [Sorghum bicolor]
Length = 702
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 70/290 (24%), Positives = 126/290 (43%), Gaps = 21/290 (7%)
Query: 431 GMLQKQV---ELITTEHGILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHD 487
GM +K + E + + G P Y ++ + G+ KE + N Q D
Sbjct: 242 GMFEKAMKVWEQLVRDPGA-SPNLATYKVMLDGLCKLGRFKEAGEVWSRMMANNHQA--D 298
Query: 488 DAALGHVI-TLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALL 546
G +I LC S G +D A + +M AG+ SVY SL+K + E R E
Sbjct: 299 TVTYGILIHGLCRS-GDVDSAARVYSDMVKAGLVLDVSVYNSLIKGFCEVGRTGEAWKFW 357
Query: 547 RDARSAGIQLDASCY----EALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVK 602
+GI+ + Y + LL S +V + A L K+++ F L+
Sbjct: 358 DSTGFSGIR-QITTYNIMTKGLLDSGMVSE----ATELLKQLENDASCSPDKVTFGTLIH 412
Query: 603 GCAQNHEAGLMAKLLQEVK-EGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGH 661
G +N A ++L++ + G+ +D V ++++I+ FCK DA + K M G
Sbjct: 413 GLCENGYANRAFEILEDARNSGEELD--VFSYSSMINRFCKDGRTHDANEVYKNMVKDGC 470
Query: 662 LPNAQTFHSMVTGYAAIGGKYTEVTELWGEMKSFASSTSMNFDEELLDSV 711
PN+ +++++ G+ + K + +++ EM S ++ L+D +
Sbjct: 471 KPNSHVYNALINGFCRV-SKINDAIKIYIEMTSNGCCPTIITYNTLIDGL 519
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 66/293 (22%), Positives = 125/293 (42%), Gaps = 44/293 (15%)
Query: 496 TLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQ 555
+LC + G +D+A L + GV Y++L+ + ++ LL + + G+Q
Sbjct: 167 SLC-ARGDVDRAVSLFSSLRRRGVAPDRVTYSTLMSGLAKHDQLDNALDLLDEMPNYGVQ 225
Query: 556 LDASCYEALL----QSKIVQK---------DTPGA----------------LHLFKEMKE 586
DA CY ALL ++ + +K PGA L FKE E
Sbjct: 226 ADAVCYNALLSGCFRTGMFEKAMKVWEQLVRDPGASPNLATYKVMLDGLCKLGRFKEAGE 285
Query: 587 --SKIPRSGHQ----EFEMLVKGCAQNHEAGLMAKLLQE-VKEGQRIDCGVHDWNNVIHF 639
S++ + HQ + +L+ G ++ + A++ + VK G +D V +N++I
Sbjct: 286 VWSRMMANNHQADTVTYGILIHGLCRSGDVDSAARVYSDMVKAGLVLDVSV--YNSLIKG 343
Query: 640 FCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEMKSFASST 699
FC+ +A K G + T++ M G G +E TEL ++++ AS +
Sbjct: 344 FCEVGRTGEAWKFWDSTGFSG-IRQITTYNIMTKGLLD-SGMVSEATELLKQLENDASCS 401
Query: 700 SMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFIDKYKYRTLFLKYHK 752
D+ ++++ G+ RA E++ +D + Y ++ ++ K
Sbjct: 402 P---DKVTFGTLIHGLCENGYANRAFEILEDARNSGEELDVFSYSSMINRFCK 451
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 103/497 (20%), Positives = 184/497 (37%), Gaps = 69/497 (13%)
Query: 249 MKPNTNTFNIALAGCLLFETTRKAEQLLDIMPRIGVKADSNLLIIMAHIYERNGRREELR 308
+ PN T+NI L +A L + R GV D + + + + ++L
Sbjct: 154 IAPNLQTYNIILRSLCARGDVDRAVSLFSSLRRRGVAPDR---VTYSTLMSGLAKHDQLD 210
Query: 309 KLQRHIDEAVNLSDIQFRQFYNCLLSCHLKFGDLNSASKMVLEMLQRAKEARNSLAAAML 368
+DE N YN LLS + G A K V E L R A +LA +
Sbjct: 211 NALDLLDEMPNYGVQADAVCYNALLSGCFRTGMFEKAMK-VWEQLVRDPGASPNLATYKV 269
Query: 369 PFNAVGVNNR------------TPSEQNVNCTNSV---DLENSGIIENHILSYEDFTKDR 413
+ + R + Q T + L SG +++ Y D K
Sbjct: 270 MLDGLCKLGRFKEAGEVWSRMMANNHQADTVTYGILIHGLCRSGDVDSAARVYSDMVK-- 327
Query: 414 KFVALEAEVKRVLQTLLGMLQKQVEL-----ITTEHGILQPTEKIYIKLVKAFLEAGKTK 468
+ L+ V L + + E T GI Q T Y + K L++G
Sbjct: 328 AGLVLDVSVYNSLIKGFCEVGRTGEAWKFWDSTGFSGIRQITT--YNIMTKGLLDSGMVS 385
Query: 469 ELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYAS 528
E T L + E + S D G +I G+ ++A ++L++ +G Y+S
Sbjct: 386 EATELLKQLEND-ASCSPDKVTFGTLIHGLCENGYANRAFEILEDARNSGEELDVFSYSS 444
Query: 529 LLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQ-----SKI-------VQKDTPG 576
++ + + R + + ++ G + ++ Y AL+ SKI ++ + G
Sbjct: 445 MINRFCKDGRTHDANEVYKNMVKDGCKPNSHVYNALINGFCRVSKINDAIKIYIEMTSNG 504
Query: 577 -----------------------ALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLM 613
A L KEM E + + + L++G ++ + +
Sbjct: 505 CCPTIITYNTLIDGLCKAEKYQEASSLTKEMLERGF-KPDIRTYASLIRGLCRDKKVDVA 563
Query: 614 AKLLQEVKE-GQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMV 672
++ E+ + G ++D VH N +IH C + +A M+ PN T+++++
Sbjct: 564 LRIWDEILDAGLQVDVMVH--NILIHGLCSAGKVDEAFCIYLEMKEKNCSPNLVTYNTLM 621
Query: 673 TGYAAIGGKYTEVTELW 689
G+ I G + LW
Sbjct: 622 DGFYEI-GSIDKAASLW 637
>gi|302780401|ref|XP_002971975.1| hypothetical protein SELMODRAFT_96626 [Selaginella moellendorffii]
gi|300160274|gb|EFJ26892.1| hypothetical protein SELMODRAFT_96626 [Selaginella moellendorffii]
Length = 755
Score = 66.6 bits (161), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 102/468 (21%), Positives = 185/468 (39%), Gaps = 45/468 (9%)
Query: 251 PNTNTFNIALAGCLLFETTRKAEQLLDIMPRIGVKADSNLLIIMAHIYERNGRREELRKL 310
PN T+N+ + G +A LL M G+ + + H + R + + KL
Sbjct: 159 PNEWTYNVLINGFCKVHKVHRAYLLLKEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKL 218
Query: 311 QRHIDEAVNLSDIQFRQFYNCLLSCHLKFGDLNSASKMVLEM----LQRAKEARNSLAAA 366
R + E + ++ YN LLS + G ++ A +++ EM LQ K + ++L A
Sbjct: 219 FRQMVENGCMPNLVT---YNTLLSGLCRNGLMDEAYELLDEMRERGLQPDKFSYDTLMAG 275
Query: 367 MLPFNAVGV---------NNRTPSEQNVNCTNSVDLENSGIIENHILSYEDFTKDRKFVA 417
+ + + N P + T L +G ++ +E ++ +
Sbjct: 276 LCKTGKIDMALKVFEDNSNGDCPPDVVAYSTLIAGLCKAGRLDEACKLFEKMREN----S 331
Query: 418 LEAEVKRVLQTLLGML------QKQVELITTEHGILQPTEKIYIKLVKAFLEAGKTKE-- 469
E +V + G+ + Q L T E P Y L+ + G+ ++
Sbjct: 332 CEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCTPNVITYSSLIDGLCKTGQVRDAQ 391
Query: 470 --LTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYA 527
+++ + N+ V+++ G +T +D A L++EM G Y
Sbjct: 392 EVFKRMIVRGIEPNV-VTYNSLIHGFCMT-----NGVDSALLLMEEMTATGCLPDIITYN 445
Query: 528 SLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEM-KE 586
+L+ + R E L D ++ D Y L+ + A LF +M K+
Sbjct: 446 TLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIGGFCKLERIDMARTLFDDMLKQ 505
Query: 587 SKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRIDCG--VHDWNNVIHFFCKKR 644
+ +P F LV+G AGL+ + ++E DC V+ + +++ FCK
Sbjct: 506 AVLPDV--VTFSTLVEGYCN---AGLVDDAERLLEEMVASDCSPDVYTYTSLVDGFCKVG 560
Query: 645 LMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEM 692
M +A + LKRM G PN T+ +++ + GK T L EM
Sbjct: 561 RMVEARRVLKRMAKRGCQPNVVTYTALIDAFCR-AGKPTVAYRLLEEM 607
Score = 62.8 bits (151), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 72/295 (24%), Positives = 127/295 (43%), Gaps = 14/295 (4%)
Query: 454 YIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQAHDLLDE 513
Y +L +A L A + E H L + + A+ + LC S G LD+A +LL+E
Sbjct: 27 YNRLFEALLRARRIDETCHILKNGWPPGITPNVFTYAV-VIQGLCKS-GDLDKACELLEE 84
Query: 514 MHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQKD 573
M +G +++Y ++ A +A R L RS + + + ++
Sbjct: 85 MRESGPVPDAAIYNFVIHALCKA---RNTAKALDYFRSMECEKNVITWTIMIDGLCKANR 141
Query: 574 TPGALHLFKEM-KESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRIDCGVHD 632
P A F +M K+ +P + +L+ G + H+ LL+E+KE + V
Sbjct: 142 LPEATTYFAKMKKKGTVP--NEWTYNVLINGFCKVHKVHRAYLLLKEMKESG-LAPNVVT 198
Query: 633 WNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEM 692
++ VIH FC++ + A K ++M G +PN T++++++G G E EL EM
Sbjct: 199 YSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCR-NGLMDEAYELLDEM 257
Query: 693 KSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFIDKYKYRTLF 747
+ + D+ D+++ + G A +V G D Y TL
Sbjct: 258 R----ERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYSTLI 308
Score = 43.9 bits (102), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 67/173 (38%), Gaps = 4/173 (2%)
Query: 449 PTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQAH 508
P Y LV F + G+ E L + K Q + +I G A+
Sbjct: 544 PDVYTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQ--PNVVTYTALIDAFCRAGKPTVAY 601
Query: 509 DLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALL-RDARSAGIQLDASCYEALLQS 567
LL+EM GV+ + Y SL+ + E +L R R + D Y ++
Sbjct: 602 RLLEEMVGNGVQPNVITYRSLIGGFCGTGDLEEARKILERLERDENCKADMFAYRVMMDG 661
Query: 568 KIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEV 620
AL L + +K+S P H + L++G Q E G ++L+E+
Sbjct: 662 LCRTGRMSAALELLEAIKQSGTPPR-HDIYVALIRGLCQGKELGKAMEVLEEM 713
>gi|226501158|ref|NP_001146427.1| uncharacterized protein LOC100280009 [Zea mays]
gi|219887141|gb|ACL53945.1| unknown [Zea mays]
Length = 522
Score = 66.6 bits (161), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 52/234 (22%), Positives = 108/234 (46%), Gaps = 6/234 (2%)
Query: 447 LQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQ 506
++P Y L+ + + +++ EK + S + +I + G L++
Sbjct: 222 IRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSGVDPSVE--TFNTLIDAYGTAGQLEK 279
Query: 507 AHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQ 566
+L +M G+++ + S++KA+ + + E A+L D + +A Y +++
Sbjct: 280 CFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIID 339
Query: 567 SKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVK-EGQR 625
+ I DT A L ++MK S + S + +L+KG ++ + +L+ ++ +G R
Sbjct: 340 AYIESGDTEQAFLLVEKMKNSGVSAS-IVTYNLLLKGLCRSSQIDEAEELIYTLRNQGLR 398
Query: 626 IDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIG 679
D V +N +I C K A + L+ M G P +T+H++V+ A+ G
Sbjct: 399 PD--VVSYNTIISACCNKGDTDKALELLQEMNKYGIRPTLRTYHTLVSALASAG 450
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 72/298 (24%), Positives = 120/298 (40%), Gaps = 33/298 (11%)
Query: 328 FYNCLLSCHLKFGDLNSASKMVLEMLQRAKEARNSLAAAMLPFNAVGVNNRTPSEQNVNC 387
YN L++ + + DL A + +M R + + +NA+ +N E
Sbjct: 193 IYNTLINGYCQVRDLRGAFCIFEQMKSR------HIRPDHITYNAL-INGLCKLEMVTKA 245
Query: 388 TNSV-DLENSGIIENHILSYEDFTKDRKFVALEAEVKRVLQTLLGMLQKQVELITTEHGI 446
+ V ++E SG+ S E F ++++ L M QK ++ G
Sbjct: 246 EDLVMEMEKSGVDP----SVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFG- 300
Query: 447 LQPTEKIYIKLVKAFLEAGKTKE----LTHFLIKAEKENLQVSHDDAALGHVITLCISLG 502
+VKAF + GK E L + K N QV + +I I G
Sbjct: 301 ---------SVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYN------SIIDAYIESG 345
Query: 503 WLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYE 562
+QA L+++M +GV AS Y LLK +++ E L+ R+ G++ D Y
Sbjct: 346 DTEQAFLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYN 405
Query: 563 ALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEV 620
++ + + DT AL L +EM + I R + + LV A M L Q++
Sbjct: 406 TIISACCNKGDTDKALELLQEMNKYGI-RPTLRTYHTLVSALASAGRVHDMECLYQQM 462
Score = 45.8 bits (107), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 104/537 (19%), Positives = 208/537 (38%), Gaps = 106/537 (19%)
Query: 108 DAWKLYEQHMQMDGFPRKTLVNKILTSFVESLDSKWLEKAYGLVEQAFEEG-KQILLEKE 166
DA K++++ + M P N ++ V+ D LE + L +Q +G K ++
Sbjct: 34 DALKVFDEMVDMGVVPNWITYNTMIDGHVKGGD---LEAGFRLRDQMLHDGPKPNIVTYN 90
Query: 167 PLIYLSLGLSKCGLPVPASTILRKLVATEQYPPVTAWSAILAHMSLTAPGAYLAAELILE 226
L+ GL + G ++ ++ + +P +S + ++ T + +
Sbjct: 91 VLLS---GLCRAGRMDETRVLMDEMASHSMFPDGFTYSILFDGLTRTGESRTMLS----- 142
Query: 227 IGYLFQDGRVDPRKKCNAPLIAMKPNTNTFNIALAGCLLFETTRKAEQLLDIMPRIGVKA 286
LF + KK + T +I L G KAEQ+L+++ G+
Sbjct: 143 ---LF----AESLKK------GVMLGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVP 189
Query: 287 DSNL--LIIMAHIYERNGRR-----EELRKLQRHIDEAVNLSDIQFRQFYNCLLSCHLKF 339
+ + +I + R+ R E+++ RHI YN L++ K
Sbjct: 190 TTVIYNTLINGYCQVRDLRGAFCIFEQMK--SRHIRPD--------HITYNALINGLCKL 239
Query: 340 GDLNSASKMVLEMLQRAKEARNSLAAAMLPFNAVGVNNRTPSEQNVNC-TNSVDLENSGI 398
+ A +V+EM ++ + ++ FN + ++ + Q C T D++ GI
Sbjct: 240 EMVTKAEDLVMEM------EKSGVDPSVETFNTL-IDAYGTAGQLEKCFTVLSDMQQKGI 292
Query: 399 IENHILSYEDFTKDRKFVALEAEVKRVLQTLLGMLQKQVELITTEHGILQPTEKIYIKLV 458
++ ++S+ K ++ + L M+ K V P ++Y ++
Sbjct: 293 -KSDVISFGSVVK---AFCKNGKIPEAVAILDDMIYKDV----------APNAQVYNSII 338
Query: 459 KAFLEAGKTKELTHFLIKAEKENLQVSH-------------------------------- 486
A++E+G T++ FL+ + +N VS
Sbjct: 339 DAYIESGDTEQ--AFLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQG 396
Query: 487 ---DDAALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVT 543
D + +I+ C + G D+A +LL EM+ G+R + Y +L+ A A R ++
Sbjct: 397 LRPDVVSYNTIISACCNKGDTDKALELLQEMNKYGIRPTLRTYHTLVSALASAGRVHDME 456
Query: 544 ALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIP-----RSGHQ 595
L + ++ +S Y ++ + + ++ L KEM E I RS H+
Sbjct: 457 CLYQQMLHKNVEPSSSIYGIMVDAYVRCENDSKVASLKKEMSEKGIAFDDTKRSNHE 513
>gi|125538899|gb|EAY85294.1| hypothetical protein OsI_06665 [Oryza sativa Indica Group]
Length = 632
Score = 66.6 bits (161), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 74/335 (22%), Positives = 132/335 (39%), Gaps = 22/335 (6%)
Query: 448 QPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQA 507
+P Y +L++ +AG+ E HF + ++E + D + ++I G LD
Sbjct: 297 RPDVFTYTELIRGLGKAGRIDEAYHFYHEMQREGCK--PDTVVMNNMINFLGKAGRLDDG 354
Query: 508 HDLLDEMHLAGVRASSSVYASLLKAYIEA-NRPREVTALLRDARSAGIQLDASCYEALLQ 566
L +EM ++ + Y +++KA E+ +R EV + + +GI Y L+
Sbjct: 355 LKLFEEMGVSHCIPNVVTYNTIIKALFESKSRVSEVFSWFERMKGSGISPSPFTYSILID 414
Query: 567 SKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRI 626
A+ L +EM E P + L+ + L +L QE+KE
Sbjct: 415 GFCKTNRIEKAMMLLEEMDEKGFPPCP-AAYCSLIDALGKAKRYDLACELFQELKE---- 469
Query: 627 DCGVHD---WNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYT 683
+CG + +I K + DA M LG PN ++++++G A +
Sbjct: 470 NCGSSSARVYAVMIKHLGKAGRLDDAINLFDEMSKLGCTPNVYAYNALMSGLA----RAC 525
Query: 684 EVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFIDKYKY 743
+ E M+ + D + +L + G RA E++ M+ + D Y
Sbjct: 526 MLDEALTTMRKMQEHGCLP-DINSYNIILNGLAKTGGPHRAMEMLTNMKNSTIKPDAVSY 584
Query: 744 RTLFLKYHKTLYKGKTPKFQTEAQLKKREAALGFK 778
T+ F+ A+L K ALGF+
Sbjct: 585 NTVLSAL------SHAGMFEEAAELMKEMNALGFE 613
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 92/214 (42%), Gaps = 7/214 (3%)
Query: 490 ALGHVITLCISLGWLDQAHDLLDEMHLAG-VRASSSVYASLLKAYIEANRPREVTALLRD 548
A +I + I G ++ H+L +EM G + + Y++L+ A+ + R LL +
Sbjct: 196 AYNSMIIMLIHEGQYEKVHELYNEMSNEGHCQPDTVTYSALISAFCKLGRQDSAIRLLNE 255
Query: 549 ARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNH 608
+ G+Q A Y ++ + GAL LF+EM+ R + L++G +
Sbjct: 256 MKENGMQPTAKIYTMIISLFFKLDNVHGALSLFEEMRYMYC-RPDVFTYTELIRGLGK-- 312
Query: 609 EAGLMAKLLQEVKEGQRIDCGVHD--WNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQ 666
AG + + E QR C NN+I+F K + D K + M +PN
Sbjct: 313 -AGRIDEAYHFYHEMQREGCKPDTVVMNNMINFLGKAGRLDDGLKLFEEMGVSHCIPNVV 371
Query: 667 TFHSMVTGYAAIGGKYTEVTELWGEMKSFASSTS 700
T+++++ + +EV + MK S S
Sbjct: 372 TYNTIIKALFESKSRVSEVFSWFERMKGSGISPS 405
>gi|293330959|ref|NP_001169662.1| uncharacterized protein LOC100383543 [Zea mays]
gi|224030695|gb|ACN34423.1| unknown [Zea mays]
gi|414870691|tpg|DAA49248.1| TPA: hypothetical protein ZEAMMB73_502001 [Zea mays]
Length = 756
Score = 66.6 bits (161), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 75/324 (23%), Positives = 139/324 (42%), Gaps = 27/324 (8%)
Query: 430 LGMLQKQVELITTEHGILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHD-D 488
LG +QK++ +P + Y V + G ++H L K LQ HD D
Sbjct: 285 LGYIQKEIA------DGFEPDQVTYNTFVHCLCQNG---HVSHAL-KVMDLMLQEGHDPD 334
Query: 489 AALGHVITLCISL-GWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLR 547
+ + C+S G LD+A ++++M G ++ + +L+ A NR E L R
Sbjct: 335 VFTYNTVINCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIVALCSQNRLEEALDLAR 394
Query: 548 DARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKG-CAQ 606
+ G+ D + L+ + D + LF+EMK S + +L+ C+
Sbjct: 395 ELTVKGLSPDVYTFNILINALCKVGDPHLGIRLFEEMKSSGCA-PDEVTYNILIDHLCSM 453
Query: 607 NHEAGLMAKLLQEVKEGQRIDC--GVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPN 664
G + L +KE + C +N +I CK+ +++AE+ +M + G +
Sbjct: 454 ----GKLVNALDLLKEMESNGCPRSTVTYNTIIDALCKQMRIEEAEEVFDQMDAHGISRS 509
Query: 665 AQTFHSMVTGYAAIGGKYTEVTELWGEM-KSFASSTSMNFDEELLDSVLYTFVRGGFFAR 723
A TF++++ G + + TEL +M K +++ + +S+L + + G +
Sbjct: 510 AVTFNTLIDGLCK-AKRIDDATELIEQMVKEGLQPSNITY-----NSILTHYCKQGDLKK 563
Query: 724 ANEVVAMMEEGKMFIDKYKYRTLF 747
A +++ M ID Y TL
Sbjct: 564 AADILETMTANGFEIDVVTYGTLI 587
Score = 52.8 bits (125), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 74/172 (43%), Gaps = 11/172 (6%)
Query: 427 QTLLGMLQKQVELITTE--------HGILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAE 478
T++ L KQ+ + E HGI + + + L+ +A + + T + +
Sbjct: 479 NTIIDALCKQMRIEEAEEVFDQMDAHGISR-SAVTFNTLIDGLCKAKRIDDATELIEQMV 537
Query: 479 KENLQVSHDDAALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANR 538
KE LQ S + ++T G L +A D+L+ M G Y +L+ +A R
Sbjct: 538 KEGLQPS--NITYNSILTHYCKQGDLKKAADILETMTANGFEIDVVTYGTLINGLCKAGR 595
Query: 539 PREVTALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIP 590
+ LLR R GI+ Y ++QS + + AL LF+EM E P
Sbjct: 596 TQVALKLLRGMRIKGIRPTPKAYNPVIQSLFRRNNLRDALSLFREMTEVGEP 647
Score = 49.7 bits (117), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 43/193 (22%), Positives = 80/193 (41%), Gaps = 10/193 (5%)
Query: 504 LDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEA 563
+++A ++ D+M G+ S+ + +L+ +A R + T L+ G+Q Y +
Sbjct: 491 IEEAEEVFDQMDAHGISRSAVTFNTLIDGLCKAKRIDDATELIEQMVKEGLQPSNITYNS 550
Query: 564 LLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEG 623
+L Q D A + + M + + L+ G + + KLL+ G
Sbjct: 551 ILTHYCKQGDLKKAADILETMTANGF-EIDVVTYGTLINGLCKAGRTQVALKLLR----G 605
Query: 624 QRIDCGVHD----WNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIG 679
RI G+ +N VI ++ ++DA + M +G P+A T+ + G G
Sbjct: 606 MRIK-GIRPTPKAYNPVIQSLFRRNNLRDALSLFREMTEVGEPPDALTYKIVFRGLCRGG 664
Query: 680 GKYTEVTELWGEM 692
G E + EM
Sbjct: 665 GPIKEAFDFLVEM 677
Score = 48.9 bits (115), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 39/200 (19%), Positives = 83/200 (41%), Gaps = 4/200 (2%)
Query: 474 LIKAEKENLQVSHDDAALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAY 533
L++ + V D A H++ + + + +EM G++ +L+KA
Sbjct: 146 LVRNQLNTFGVQADTAVYNHLLNVLAEGSRMKLLESVYNEMTDRGIQPDVVTLNTLIKAL 205
Query: 534 IEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSG 593
A++ R +L + S + D + + L+Q I + AL + +M E+ +
Sbjct: 206 CRAHQVRTAVLMLEEMSSHAVAPDETTFTTLMQGFIEEGSIEAALRVKTKMMETGCSPT- 264
Query: 594 HQEFEMLVKG-CAQNHEAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKA 652
+L+ G C + + +E+ +G D +N +H C+ + A K
Sbjct: 265 RVTVNVLINGYCKMGRVEDALGYIQKEIADGFEPD--QVTYNTFVHCLCQNGHVSHALKV 322
Query: 653 LKRMRSLGHLPNAQTFHSMV 672
+ M GH P+ T+++++
Sbjct: 323 MDLMLQEGHDPDVFTYNTVI 342
>gi|357151724|ref|XP_003575883.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic-like [Brachypodium distachyon]
Length = 757
Score = 66.6 bits (161), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 58/256 (22%), Positives = 114/256 (44%), Gaps = 11/256 (4%)
Query: 494 VITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAG 553
VI + G L++A ++++M +G ++ + +L+ A N+ E L R+ G
Sbjct: 342 VINCLCNNGELEEAKGIVNQMVDSGCLPDTTTFNTLIVALCTENQLEEALDLARELTVKG 401
Query: 554 IQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLM 613
+ + + L+ + D A+ LF+EMK S + +L+ +G +
Sbjct: 402 LSPNVYTFNILINALCKVGDPHLAVRLFEEMKSSGCTPD-EVTYNILIDNLCS---SGKL 457
Query: 614 AKLLQEVKEGQRIDC--GVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSM 671
AK L +KE + C +N +I CK+R +++AE+ +M G NA TF+++
Sbjct: 458 AKALDLLKEMEVSGCPQSTVTYNTIIDGLCKRRRIEEAEEVFDQMDVTGIGRNAITFNTL 517
Query: 672 VTGYAAIGGKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMM 731
+ G + + EL +M S + + +S+L + + G ++A +++ M
Sbjct: 518 IDGLCN-AERIDDAAELVDQM----ISEGLQPNNVTYNSILTHYCKQGNISKAADILQTM 572
Query: 732 EEGKMFIDKYKYRTLF 747
+D Y TL
Sbjct: 573 TANGFEVDVVTYATLI 588
Score = 46.6 bits (109), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 33/134 (24%), Positives = 55/134 (41%), Gaps = 2/134 (1%)
Query: 457 LVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQAHDLLDEMHL 516
L+ A + + + + E LQ ++ ++T G + +A D+L M
Sbjct: 517 LIDGLCNAERIDDAAELVDQMISEGLQ--PNNVTYNSILTHYCKQGNISKAADILQTMTA 574
Query: 517 AGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQKDTPG 576
G YA+L+ +A R + LLR R G++ Y ++QS +
Sbjct: 575 NGFEVDVVTYATLINGLCKARRTQAALKLLRGMRMKGMKPTPKAYNPVIQSLFRGNNGRD 634
Query: 577 ALHLFKEMKESKIP 590
AL LF+EM E P
Sbjct: 635 ALSLFREMTEVGGP 648
Score = 45.4 bits (106), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 51/239 (21%), Positives = 102/239 (42%), Gaps = 15/239 (6%)
Query: 447 LQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCIS---LGW 503
L P+ +Y ++++ AG + + + +E +V LG V + S L
Sbjct: 86 LTPSRDVYEEIIRKLGTAGAFDLMKVLVGEMRREGHEV-----GLGLVQSFIGSYARLQL 140
Query: 504 LDQAHDLL-DEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYE 562
D A DL+ +++ + GV+A++ VY LL E ++ + + + + S GI+ D +
Sbjct: 141 FDDAFDLVSNQLDMFGVQANTEVYNHLLTVLAEGSKIKLLESAYTEMSSQGIEPDVVTFN 200
Query: 563 ALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKE 622
++ + + A+ + +EM + F L++G E G + L+
Sbjct: 201 TVIDALCRARQARTAVLMLEEMSSCDVAPD-ETTFTTLMEGFV---EEGSIEAALRLKAR 256
Query: 623 GQRIDCGVHD--WNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIG 679
+ C N +I+ +CK + DA +++ + G P+ TF + V G G
Sbjct: 257 MSEMGCSPTSVTVNVLINGYCKLGRVGDALGYIQQEIADGFEPDRVTFSTFVNGLCQNG 315
Score = 44.3 bits (103), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 99/485 (20%), Positives = 172/485 (35%), Gaps = 74/485 (15%)
Query: 249 MKPNTNTFNIALAGCLLFETTRKAEQLLDIMPRIGVKADSNLLIIMAHIYERNGR-REEL 307
+ P+ TF + G + + A +L M +G S + ++ + Y + GR + L
Sbjct: 227 VAPDETTFTTLMEGFVEEGSIEAALRLKARMSEMGCSPTSVTVNVLINGYCKLGRVGDAL 286
Query: 308 RKLQRHIDEAVNLSDIQFRQFYNCLLSCHLKFGDLNSASKMVLEMLQRAKEARNSLAAAM 367
+Q+ I + + F F N L + G ++ A K++ MLQ E + +
Sbjct: 287 GYIQQEIADGFEPDRVTFSTFVNGLC----QNGHVDHALKVLGLMLQEGCEPDVYTYSTV 342
Query: 368 LPFNAVGVNNRTPSEQNVNCTNSVDLENSGIIENHILSY---EDFTKDRKFVALEAEVKR 424
+ N C N E GI+ + S + T + VAL E +
Sbjct: 343 I---------------NCLCNNGELEEAKGIVNQMVDSGCLPDTTTFNTLIVALCTENQ- 386
Query: 425 VLQTLLGMLQKQVELITTEHGILQPTEKIYIKLVKAFLEAGKTKELTHFLIK--AEKENL 482
L+ L + ++ T G L P + L+ A + G H ++ E ++
Sbjct: 387 -LEEALDLARE-----LTVKG-LSPNVYTFNILINALCKVGDP----HLAVRLFEEMKSS 435
Query: 483 QVSHDDAALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREV 542
+ D+ +I S G L +A DLL EM ++G S+ Y +++ + R E
Sbjct: 436 GCTPDEVTYNILIDNLCSSGKLAKALDLLKEMEVSGCPQSTVTYNTIIDGLCKRRRIEEA 495
Query: 543 TALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVK 602
+ GI +A + L+ + A L +M + + +L
Sbjct: 496 EEVFDQMDVTGIGRNAITFNTLIDGLCNAERIDDAAELVDQMISEGLQPNNVTYNSILTH 555
Query: 603 GCAQNHEAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMR----- 657
C Q + + L G +D V + +I+ CK R Q A K L+ MR
Sbjct: 556 YCKQGNISKAADILQTMTANGFEVD--VVTYATLINGLCKARRTQAALKLLRGMRMKGMK 613
Query: 658 ------------------------------SLGHLPNAQTFHSMVTGYAAIGGKYTEVTE 687
+G P+A T+ + G GG E +
Sbjct: 614 PTPKAYNPVIQSLFRGNNGRDALSLFREMTEVGGPPDAFTYKIVFRGLCRGGGPIKEAFD 673
Query: 688 LWGEM 692
EM
Sbjct: 674 FLVEM 678
>gi|358346655|ref|XP_003637381.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355503316|gb|AES84519.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1023
Score = 66.6 bits (161), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 67/269 (24%), Positives = 105/269 (39%), Gaps = 40/269 (14%)
Query: 447 LQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQ 506
L P Y L+ + + GK + L K EKE V + +I G L +
Sbjct: 457 LAPNCVTYSALLDGYCKLGKMELAELVLQKMEKE--HVPPNVITFSSIINGYAKKGMLSK 514
Query: 507 AHDLLDEMHLAGVRASSSVYASLLKAYIEAN----------------------------- 537
A D+L EM V ++ VYA L+ Y +A
Sbjct: 515 AVDVLREMVQRNVMPNTIVYAILIDGYFKAGEQDVADDFCKEMKSRRLEESNVIFDILLN 574
Query: 538 ------RPREVTALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPR 591
R E +L+ D S GI D Y +L+ + + AL + +EMKE I R
Sbjct: 575 NLKRVGRMDEARSLIIDMYSKGIDPDIVNYASLIDGYFKEGNQLAALSIVQEMKEKNI-R 633
Query: 592 SGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEK 651
+ L+KG + + + ++ G DC +N +I+ +C K +DA
Sbjct: 634 FDVVAYNALIKGLLRLGKYDPRYVCSRMIELGLAPDC--ITYNTIINTYCIKGKTEDALD 691
Query: 652 ALKRMRSLGHLPNAQTFHSMVTGYAAIGG 680
L M+S G +PNA T++ ++ G G
Sbjct: 692 ILNEMKSYGIMPNAVTYNILIGGLCKTGA 720
Score = 45.1 bits (105), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 67/307 (21%), Positives = 121/307 (39%), Gaps = 11/307 (3%)
Query: 447 LQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQ 506
LQPT Y L+ A+ + +E +H L K N + D ++ G L +
Sbjct: 317 LQPTLVTYTTLIAAYCKFVGVEE-SHSLYKKMIMN-GIMPDVVTCSSILYGFCRHGKLTE 374
Query: 507 AHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQ 566
A L EM+ G+ + YA+++ + ++ R E L GI D ++
Sbjct: 375 AAVLFREMYEMGLDPNHVSYATIINSLFKSGRVMEAFNLQSQMVVRGISFDIVTCTTVMD 434
Query: 567 SKIVQKDTPGALHLFKE-MKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQR 625
T A +F+ +K + P + L+ G + + L +LQ++ E +
Sbjct: 435 GLFKVGKTKEAEEVFETILKLNLAPNC--VTYSALLDGYCKLGKMELAELVLQKM-EKEH 491
Query: 626 IDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEV 685
+ V ++++I+ + KK ++ A L+ M +PN + ++ GY G+
Sbjct: 492 VPPNVITFSSIINGYAKKGMLSKAVDVLREMVQRNVMPNTIVYAILIDGYFK-AGEQDVA 550
Query: 686 TELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFIDKYKYRT 745
+ EMKS S + D +L R G A ++ M + D Y +
Sbjct: 551 DDFCKEMKSRRLEES----NVIFDILLNNLKRVGRMDEARSLIIDMYSKGIDPDIVNYAS 606
Query: 746 LFLKYHK 752
L Y K
Sbjct: 607 LIDGYFK 613
Score = 42.4 bits (98), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 49/240 (20%), Positives = 99/240 (41%), Gaps = 10/240 (4%)
Query: 447 LQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQ 506
L P Y ++ + GKT++ L E ++ + + +I G +++
Sbjct: 666 LAPDCITYNTIINTYCIKGKTEDALDIL--NEMKSYGIMPNAVTYNILIGGLCKTGAVEK 723
Query: 507 AHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQ 566
A LDEM + + + L+KAY + + ++ + ++G++L + Y L+
Sbjct: 724 AESALDEMLVMEFVPTPITHKFLVKAYSRSEKADKILQIHEKLVASGLELSLTVYNTLIT 783
Query: 567 SKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKG-CAQNHEAGLMAKLLQEVKEGQR 625
T A + EM + I + + L++G C +H + Q +G
Sbjct: 784 VFCRLGMTRKAKVVLDEMVKRGIS-ADLVTYNALIRGYCTGSHVEKALKTYSQMFVDG-- 840
Query: 626 IDCGVHDWNNVIHFFCKKRLMQDAE----KALKRMRSLGHLPNAQTFHSMVTGYAAIGGK 681
I + +N ++ LM++ K + M G +PNA T+ +V+GY +G +
Sbjct: 841 IAPNITTYNTLLGGLSNAGLMEEMMEETEKLVSEMNERGLVPNAATYDILVSGYGRVGNR 900
>gi|242047602|ref|XP_002461547.1| hypothetical protein SORBIDRAFT_02g004530 [Sorghum bicolor]
gi|241924924|gb|EER98068.1| hypothetical protein SORBIDRAFT_02g004530 [Sorghum bicolor]
Length = 696
Score = 66.6 bits (161), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 62/262 (23%), Positives = 111/262 (42%), Gaps = 21/262 (8%)
Query: 483 QVSHDDAALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPRE- 541
+V+ D A G +I+ C G L+ L ++ G+RA + + LL+ R +
Sbjct: 139 KVAPDIATFGILISCCCDAGCLNLGFAALGQIIKTGLRAQAVTFTPLLRTLCAEKRTSDA 198
Query: 542 VTALLRDARSAGIQLDASCYEALLQSKIVQKDTPGA---LHLFKEMKESKIPRSGHQEFE 598
+ +LR G D Y LL+ +K A +H+ E ++ P +
Sbjct: 199 MNIVLRRMPELGCTPDVFSYTTLLKGLCAEKKCEEAAELIHMMAEDGDNCPPNV--VSYT 256
Query: 599 MLVKGCAQNHEAG----LMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALK 654
++ G + + G L K+L + C N+VI CK + M AE L+
Sbjct: 257 TVIHGFFKEGDVGKAYTLFCKMLDHGIPPNVVTC-----NSVIDGLCKVQAMDKAEAVLQ 311
Query: 655 RMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYT 714
+M +PN T++S++ GY + G++TE + EM ++ L+D
Sbjct: 312 QMIDEHIMPNCTTYNSLIHGYLS-SGQWTEAVRILKEMSRDGQRPNVVTYSMLIDC---- 366
Query: 715 FVRGGFFARANEVV-AMMEEGK 735
+ G A A E+ +M++ G+
Sbjct: 367 LCKSGLHAEAREIFNSMIQSGQ 388
Score = 41.6 bits (96), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 49/241 (20%), Positives = 98/241 (40%), Gaps = 26/241 (10%)
Query: 504 LDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEA 563
+D+A +L +M + + + Y SL+ Y+ + + E +L++ G + + Y
Sbjct: 303 MDKAEAVLQQMIDEHIMPNCTTYNSLIHGYLSSGQWTEAVRILKEMSRDGQRPNVVTYSM 362
Query: 564 LLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCA-------QNHEAGLMAKL 616
L+ A +F M +S + + L+ G A N+ LM
Sbjct: 363 LIDCLCKSGLHAEAREIFNSMIQSG-QKPNASTYGSLLHGYATEGNLVDMNNVKDLM--- 418
Query: 617 LQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYA 676
V+ G R G H +N I+ +CK + +A +M+ G +P+ + +++ G
Sbjct: 419 ---VQNGMRP--GRHVFNIEIYAYCKCGRLDEASLTFNKMQQQGFMPDIVAYTTVIDGLC 473
Query: 677 AIGGKYTEVTELWGEMKSFASSTSMNFDEELL--DSVLYTFVRGGFFARANEVV-AMMEE 733
IG L M F +++ +++++ F G + +A E+ MM+
Sbjct: 474 KIG-------RLDDAMSRFCQMIDDGLSPDIITFNTLIHGFALHGKWEKAEELFYEMMDR 526
Query: 734 G 734
G
Sbjct: 527 G 527
Score = 40.8 bits (94), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 57/255 (22%), Positives = 109/255 (42%), Gaps = 9/255 (3%)
Query: 502 GWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCY 561
G L +++ D M G+R V+ + AY + R E + + G D Y
Sbjct: 406 GNLVDMNNVKDLMVQNGMRPGRHVFNIEIYAYCKCGRLDEASLTFNKMQQQGFMPDIVAY 465
Query: 562 EALLQS--KIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQE 619
++ KI + D A+ F +M + + F L+ G A + + +L E
Sbjct: 466 TTVIDGLCKIGRLDD--AMSRFCQMIDDGL-SPDIITFNTLIHGFALHGKWEKAEELFYE 522
Query: 620 VKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIG 679
+ + + I V+ +N++I K+ + +A K M G PN ++++M+ GY I
Sbjct: 523 MMD-RGIPPNVNTFNSMIDKLFKEGKVTEARKLFDLMPRAGAKPNVVSYNTMIHGY-FIA 580
Query: 680 GKYTEVTELWGEMKSFA-SSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFI 738
G+ EV +L +M T++ F+ LLD ++ ++ + + E+G++
Sbjct: 581 GEVGEVMKLLDDMLLIGLKPTAVTFN-TLLDGMVSMGLKPDVVTCKTLIDSCCEDGRIED 639
Query: 739 DKYKYRTLFLKYHKT 753
+R + K KT
Sbjct: 640 ILTLFREMLGKADKT 654
>gi|225189439|emb|CAR70003.1| pentatricopeptide repeat(PPR)-containing protein At1g12700
[Arabidopsis thaliana]
Length = 602
Score = 66.6 bits (161), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 82/322 (25%), Positives = 129/322 (40%), Gaps = 18/322 (5%)
Query: 431 GMLQKQVELI--TTEHGILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDD 488
G + K V L+ E+G QP Y +V +G T L K E+ N V D
Sbjct: 172 GKVSKAVVLVDRMVENGC-QPDMVTYNSIVNGICRSGDTSLAFDMLRKMEERN--VKADV 228
Query: 489 AALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRD 548
+I G +D A L EM G+++S Y SL++ +A + + LL+D
Sbjct: 229 FTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKD 288
Query: 549 ARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKG-CAQN 607
S I + + LL + + A L+KEM I + L+ G C QN
Sbjct: 289 MVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGIS-PNIITYNTLMDGYCMQN 347
Query: 608 H--EAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNA 665
EA M L+ K I + ++I +C + + D K + + G + NA
Sbjct: 348 RLSEANNMLDLMVRNKCSPDI----VTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANA 403
Query: 666 QTFHSMVTGYAAIGGKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARAN 725
T+ +V G+ GK EL+ EM S + LLD + G +A
Sbjct: 404 VTYSILVQGFCQ-SGKIKLAEELFQEMVSHGVLPDVMTYGILLDGL----CDNGKLEKAL 458
Query: 726 EVVAMMEEGKMFIDKYKYRTLF 747
E+ +++ KM + Y T+
Sbjct: 459 EIFEDLQKSKMDLGIVMYTTII 480
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 83/188 (44%), Gaps = 7/188 (3%)
Query: 560 CYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQE 619
C+ L+S IV A+ LF+EM S+ P G +F A+ + L+ ++
Sbjct: 55 CFRERLRSGIVDIKKDDAIALFQEMIRSR-PLPGLVDFSRFFSAIARTKQFNLVLDFCKQ 113
Query: 620 VKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIG 679
+ E I ++ N +I+ FC+ A L ++ LG+ P+ TF++++ G +
Sbjct: 114 L-ELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLINGL-CLE 171
Query: 680 GKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFID 739
GK ++ L M M +S++ R G + A +++ MEE + D
Sbjct: 172 GKVSKAVVLVDRMVENGCQPDM----VTYNSIVNGICRSGDTSLAFDMLRKMEERNVKAD 227
Query: 740 KYKYRTLF 747
+ Y T+
Sbjct: 228 VFTYSTII 235
Score = 48.5 bits (114), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 39/177 (22%), Positives = 75/177 (42%), Gaps = 4/177 (2%)
Query: 504 LDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEA 563
L +A+++LD M + SL+K Y R + + R+ G+ +A Y
Sbjct: 349 LSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSI 408
Query: 564 LLQSKIVQKDTPGALHLFKEM-KESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKE 622
L+Q A LF+EM +P + +L+ G N + ++ +++++
Sbjct: 409 LVQGFCQSGKIKLAEELFQEMVSHGVLPDV--MTYGILLDGLCDNGKLEKALEIFEDLQK 466
Query: 623 GQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIG 679
++D G+ + +I CK ++DA + G PN T+ M++G G
Sbjct: 467 -SKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKG 522
Score = 46.2 bits (108), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 42/209 (20%), Positives = 94/209 (44%), Gaps = 3/209 (1%)
Query: 504 LDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEA 563
+D + + G+ A++ Y+ L++ + ++ + + L ++ S G+ D Y
Sbjct: 384 VDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGI 443
Query: 564 LLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEG 623
LL AL +F+++++SK+ G + +++G + + L +
Sbjct: 444 LLDGLCDNGKLEKALEIFEDLQKSKMDL-GIVMYTTIIEGMCKGGKVEDAWNLFCSL-PC 501
Query: 624 QRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYT 683
+ + V + +I CKK + +A L++M G+ PN T+++++ + G T
Sbjct: 502 KGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLR-DGDLT 560
Query: 684 EVTELWGEMKSFASSTSMNFDEELLDSVL 712
+L EMKS S + + ++D +L
Sbjct: 561 ASAKLIEEMKSCGFSADASSIKMVIDMLL 589
>gi|125582652|gb|EAZ23583.1| hypothetical protein OsJ_07284 [Oryza sativa Japonica Group]
Length = 667
Score = 66.6 bits (161), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 66/249 (26%), Positives = 109/249 (43%), Gaps = 21/249 (8%)
Query: 504 LDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEA 563
+D A DL D+M L G YA+L++ EA R E L + Q D Y A
Sbjct: 26 VDVARDLFDKMPLRGFAQDVVSYATLIEGLCEAGRIDEAVELFGEMD----QPDMHMYAA 81
Query: 564 LLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEG 623
L++ + L + + MKE R + + +V + +A ++LQE+ E
Sbjct: 82 LVKGLCNAERGEEGLLMLRRMKELGW-RPSTRAYAAVVDFRCRERKAKEAEEMLQEMFEK 140
Query: 624 QRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYT 683
C V VI+ +CK+ M DA + L+ M+ G PN T++++V G+ G +
Sbjct: 141 GLAPC-VVTCTAVINAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHK 199
Query: 684 EVTELWGEMKSFASSTSMNFDEELLDSVLYT-FVRG----GFFARANEVVAMMEEGKMFI 738
+T L +M++ + D+V Y +RG G A ++ +ME +
Sbjct: 200 AMT-LLNKMRACGVNP---------DAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIA 249
Query: 739 DKYKYRTLF 747
D+Y Y L
Sbjct: 250 DQYTYNALI 258
Score = 49.3 bits (116), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 42/197 (21%), Positives = 82/197 (41%), Gaps = 5/197 (2%)
Query: 502 GWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCY 561
G DQA L D + G++ ++ + SL+ ++ + L SAG D Y
Sbjct: 265 GRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSGKADIAWKFLEKMVSAGCTPDTYTY 324
Query: 562 EALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQE-V 620
+ ++ K + L EM + + S + +++ + GL+A+ E V
Sbjct: 325 SSFIEHLCKMKGSQEGLSFIGEMLQKDVKPS-TVNYTIVIHKLLKERNYGLVARTWGEMV 383
Query: 621 KEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGG 680
G D V + + +C + + +AE L M G + +++++ G+A+I G
Sbjct: 384 SSGCNPD--VVTYTTSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAYNTLMDGHASI-G 440
Query: 681 KYTEVTELWGEMKSFAS 697
+ + +M S AS
Sbjct: 441 QTDHAVSILKQMTSVAS 457
Score = 48.9 bits (115), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 51/233 (21%), Positives = 91/233 (39%), Gaps = 6/233 (2%)
Query: 448 QPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQA 507
QP +Y LVK A + +E L+ + L A V+ +A
Sbjct: 73 QPDMHMYAALVKGLCNAERGEE--GLLMLRRMKELGWRPSTRAYAAVVDFRCRERKAKEA 130
Query: 508 HDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQS 567
++L EM G+ +++ AY + R + +L + G + + Y AL+Q
Sbjct: 131 EEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQG 190
Query: 568 KIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKG-CAQNHEAGLMAKLLQEVKEGQRI 626
+ A+ L +M+ + + +L++G C H A L + EG +
Sbjct: 191 FCNEGKVHKAMTLLNKMRACGV-NPDAVTYNLLIRGQCIDGHIES--AFRLLRLMEGDGL 247
Query: 627 DCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIG 679
+ +N +I+ CK A + + G PNA TF+S++ G G
Sbjct: 248 IADQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSG 300
>gi|356562139|ref|XP_003549331.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16390,
chloroplastic-like [Glycine max]
Length = 689
Score = 66.6 bits (161), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 52/232 (22%), Positives = 101/232 (43%), Gaps = 3/232 (1%)
Query: 448 QPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQA 507
+P + Y ++ A+ AG +A E ++ D +I + G D
Sbjct: 233 EPDDVTYSAMIDAYGRAGNIDMALRLYDRARTEKWRL--DSVTFSTLIKMYGLAGNYDGC 290
Query: 508 HDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQS 567
++ EM GV+++ +Y +LL A A RP + ++ + + G + + Y +LL++
Sbjct: 291 LNVYQEMKALGVKSNMVIYNTLLDAMGRAKRPWQAKSIYTEMTNNGFLPNWATYASLLRA 350
Query: 568 KIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRID 627
+ + AL ++KEMKE + + H + L+ CA A K+ +++K
Sbjct: 351 YGRGRYSEDALFVYKEMKEKGMEMNTHL-YNTLLAMCADLGLADDAFKIFEDMKSSATCL 409
Query: 628 CGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIG 679
C ++++I + + +AE+ L M G P S+V Y +G
Sbjct: 410 CDSWTFSSLITIYSCSGNVSEAERMLNEMIESGFQPTIFVLTSLVQCYGKVG 461
>gi|242082678|ref|XP_002441764.1| hypothetical protein SORBIDRAFT_08g002022 [Sorghum bicolor]
gi|241942457|gb|EES15602.1| hypothetical protein SORBIDRAFT_08g002022 [Sorghum bicolor]
Length = 695
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 98/447 (21%), Positives = 183/447 (40%), Gaps = 84/447 (18%)
Query: 329 YNCLLSCHLKFGDLNSASKMVLEMLQRAKEARNSLAAAMLPFNAVGVNNRTPSEQNVNCT 388
YN L+ + K GDL ++V EM ++ AA ++ +NA+ +NC
Sbjct: 238 YNSLIDGYGKCGDLEEVEQLVSEM------RKSGCAADVVTYNAL-----------INCF 280
Query: 389 NSV-----------DLENSGIIENHILSYEDFTKDRKFVALEAEVKRVLQTLLGMLQKQV 437
+ +++ G++ N ++++ F ++A K G++Q+ +
Sbjct: 281 SKFGRMEKAYSYFGEMKRQGVVAN-VVTFSTF--------VDAFCKE------GLVQEAM 325
Query: 438 ELITTEH--GILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVI 495
+L G++ P E Y LV +AG+ + L + + L + +V+
Sbjct: 326 KLFAQMRVRGMM-PNEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQGL--------VPNVV 376
Query: 496 TLCISL------GWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDA 549
T + + G + +A ++L M GV+A+ +Y +L+ + N LL
Sbjct: 377 TYTVMVDGLCKEGKVAEADNVLSLMERGGVKANELLYTTLIHGHFMNNNSERALDLLNQM 436
Query: 550 RSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKI-PRSG--HQEFEMLVKGCAQ 606
++ G++LD S Y L+ + A L +M + P + + L K +
Sbjct: 437 KNKGMELDVSLYGTLIWGLCKDQKVDEAKSLLHKMAGCGLRPNTVIYTTIMDALFKAGKE 496
Query: 607 NHEAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQ 666
+ L+ K+L + V + +I CK + +A +MR LG PN Q
Sbjct: 497 SEAVALLHKILDSGFQPN-----VVTYCALIDGLCKAGSISEAISHFNKMRELGLDPNVQ 551
Query: 667 TFHSMVTGYAAIGGKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARAN- 725
+ +++ G+ I G + L EM S LD V+YT + G+ +AN
Sbjct: 552 AYTALIDGFCKI-GSLNKAMHLMNEMIDKGMS---------LDKVVYTSLIDGYMKQANL 601
Query: 726 -EVVAM---MEEGKMFIDKYKYRTLFL 748
+ A+ M E + +D Y Y T F+
Sbjct: 602 QDAFALKTKMIESGLQLDLYCY-TCFI 627
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 108/520 (20%), Positives = 197/520 (37%), Gaps = 98/520 (18%)
Query: 251 PNTNTFNIALAGCLLFETTRKAEQLLDIMPRIGVKADSNLLIIMAHIYERNGRREELRKL 310
PN TFNI + +A L M +G D + Y + G EE+ +L
Sbjct: 198 PNVFTFNIVIDFLCKEGELVEARALFVRMKAMGCSPDVVTYNSLIDGYGKCGDLEEVEQL 257
Query: 311 QRHIDEAVNLSDIQFRQFYNCLLSCHLKFGDLNSASKMVLEMLQRAKEAR---------- 360
+ ++ +D+ YN L++C KFG + A EM ++ A
Sbjct: 258 VSEMRKSGCAADVVT---YNALINCFSKFGRMEKAYSYFGEMKRQGVVANVVTFSTFVDA 314
Query: 361 ----NSLAAAMLPFNAVGVNNRTPSEQNVNCTNSVD-----------------LENSGII 399
+ AM F + V P+E T+ VD + + G++
Sbjct: 315 FCKEGLVQEAMKLFAQMRVRGMMPNE--FTYTSLVDGTCKAGRLDDAIVLLDEMVHQGLV 372
Query: 400 ENHILSY----EDFTKDRKFVALEAEVKRVLQTLLGMLQKQVELITTEHGILQPTEKIYI 455
N +++Y + K+ K AE VL + E G ++ E +Y
Sbjct: 373 PN-VVTYTVMVDGLCKEGKV----AEADNVLSLM-------------ERGGVKANELLYT 414
Query: 456 KLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQAHDLLDEMH 515
L+ ++ L + + + +++ D + G +I +D+A LL +M
Sbjct: 415 TLIHGHFMNNNSERALDLLNQMKNKGMEL--DVSLYGTLIWGLCKDQKVDEAKSLLHKMA 472
Query: 516 LAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQKDTP 575
G+R ++ +Y +++ A +A + E ALL +G Q + Y AL+
Sbjct: 473 GCGLRPNTVIYTTIMDALFKAGKESEAVALLHKILDSGFQPNVVTYCALIDGLCKAGSIS 532
Query: 576 GALHLFKEMKE--------------------SKIPRSGHQEFEMLVKGCAQNHEA----- 610
A+ F +M+E + ++ H EM+ KG + +
Sbjct: 533 EAISHFNKMRELGLDPNVQAYTALIDGFCKIGSLNKAMHLMNEMIDKGMSLDKVVYTSLI 592
Query: 611 -GLMAKL-LQE--------VKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLG 660
G M + LQ+ ++ G ++D ++ + I FC +MQ+A L M G
Sbjct: 593 DGYMKQANLQDAFALKTKMIESGLQLD--LYCYTCFISGFCNMNMMQEARGVLSEMIGTG 650
Query: 661 HLPNAQTFHSMVTGYAAIGGKYTEVTELWGEMKSFASSTS 700
P+ ++ ++ Y + G E + L EM+S SS +
Sbjct: 651 ITPDKTVYNCLIRKYQKL-GNMEEASSLQNEMESVLSSCT 689
Score = 47.4 bits (111), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 59/117 (50%), Gaps = 7/117 (5%)
Query: 577 ALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRIDCGVHDWNNV 636
A+ +++ ++P + +L++ A+N + GL+ +L + V +N V
Sbjct: 153 AVRALARVRQLRVPPNTRTCNHILLR-LARNRQGGLVRRLFDLLPVPN-----VFTFNIV 206
Query: 637 IHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEMK 693
I F CK+ + +A RM+++G P+ T++S++ GY G EV +L EM+
Sbjct: 207 IDFLCKEGELVEARALFVRMKAMGCSPDVVTYNSLIDGYGKC-GDLEEVEQLVSEMR 262
>gi|162462150|ref|NP_001105879.1| chloroplast RNA processing1 [Zea mays]
gi|3289002|gb|AAC25599.1| CRP1 [Zea mays]
Length = 668
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 57/250 (22%), Positives = 110/250 (44%), Gaps = 5/250 (2%)
Query: 445 GILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWL 504
G ++P + Y L+K ++ G K L E V+ D+A ++ G
Sbjct: 293 GEIKPRTRAYNALLKGYVRIGSLKNAEQVL--DEMSQCGVAPDEATYSLLVDAYTRAGRW 350
Query: 505 DQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEAL 564
+ A LL EM GV+ SS V++ +L + + ++ A+LR+ +++G++ D Y +
Sbjct: 351 ESARILLKEMEADGVKPSSYVFSRILAGFRDRGDWQKAFAVLREMQASGVRPDRHFYNVM 410
Query: 565 LQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQ 624
+ + A+ F +M+E I + L+ + A+L +E++E
Sbjct: 411 IDTFGKYNCLGHAMDAFNKMREEGI-EPDVVTWNTLIDAHCKGGRHDRAAELFEEMRESN 469
Query: 625 RIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTE 684
G +N +I+ ++ + E L M+ G +PN T+ ++V Y G+Y E
Sbjct: 470 -CPPGTTTYNIMINLLGEQEHWEGVEAMLSEMKEQGLVPNIITYTTLVDVYGR-SGRYKE 527
Query: 685 VTELWGEMKS 694
+ MK+
Sbjct: 528 AIDCIEAMKA 537
Score = 55.8 bits (133), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 93/391 (23%), Positives = 156/391 (39%), Gaps = 53/391 (13%)
Query: 249 MKPNTNTFNIALAGCLLFETTRKAEQLLDIMPRIGVKADSNLLIIMAHIYERNGRREELR 308
+KP T +N L G + + + AEQ+LD M + GV D ++ Y R GR E R
Sbjct: 295 IKPRTRAYNALLKGYVRIGSLKNAEQVLDEMSQCGVAPDEATYSLLVDAYTRAGRWESAR 354
Query: 309 KLQRHID-EAVNLSDIQFRQFYNCLLSCHLKFGDLNSASKMVLEMLQRAKEAR------- 360
L + ++ + V S F + +L+ GD A ++ EM +A R
Sbjct: 355 ILLKEMEADGVKPSSYVFSR----ILAGFRDRGDWQKAFAVLREM--QASGVRPDRHFYN 408
Query: 361 ---------NSLAAAMLPFNAVGVNNRTPSEQNVNCTNSVDLENSGIIENHILSYEDFTK 411
N L AM FN + P V +D G H + E F +
Sbjct: 409 VMIDTFGKYNCLGHAMDAFNKMREEGIEP--DVVTWNTLIDAHCKG--GRHDRAAELFEE 464
Query: 412 DRKFVALEAEVK-RVLQTLLGMLQ--KQVELITT---EHGILQPTEKIYIKLVKAFLEAG 465
R+ ++ LLG + + VE + + E G++ P Y LV + +G
Sbjct: 465 MRESNCPPGTTTYNIMINLLGEQEHWEGVEAMLSEMKEQGLV-PNIITYTTLVDVYGRSG 523
Query: 466 KTKELTHFLIKAEKENLQVSHDDAALGH-VITLCISLGWLDQAHDLLDEMHLAGVRASSS 524
+ KE + + + L+ S + H ++ G D A +++ M G+ S
Sbjct: 524 RYKEAIDCIEAMKADGLKPS---PTMYHALVNAYAQRGLADHALNVVKAMKADGLEVSIL 580
Query: 525 VYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEM 584
V SL+ A+ E R E ++L+ R G++ D Y L+++ L +
Sbjct: 581 VLNSLINAFGEDRRVVEAFSVLQFMRENGLRPDVITYTTLMKA------------LIRVE 628
Query: 585 KESKIPRSGHQEFEMLVKGCAQNHEAGLMAK 615
+ K+P EM+ GCA + +A M +
Sbjct: 629 QFDKVPVIYE---EMITSGCAPDRKARAMLR 656
>gi|15238505|ref|NP_201359.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75180383|sp|Q9LSL9.1|PP445_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g65560
gi|8978284|dbj|BAA98175.1| unnamed protein product [Arabidopsis thaliana]
gi|110737310|dbj|BAF00601.1| hypothetical protein [Arabidopsis thaliana]
gi|332010688|gb|AED98071.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 915
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 69/316 (21%), Positives = 133/316 (42%), Gaps = 17/316 (5%)
Query: 435 KQVELITTEHGILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQ---VSHDDAAL 491
KQV + E + P Y K+V + + G +E ++ K + L ++ +
Sbjct: 203 KQVYMEMLEDKVC-PNIYTYNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIM 261
Query: 492 GHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARS 551
G+ LD A + +EM L G R + Y L+ A R E L +
Sbjct: 262 GYC-----QRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKD 316
Query: 552 AGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAG 611
Y L++S + AL+L KEM+E+ I + H ++ C+Q
Sbjct: 317 DECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEK 376
Query: 612 LMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSM 671
L Q +++G + V +N +I+ +CK+ +++DA ++ M S PN +T++ +
Sbjct: 377 ARELLGQMLEKGLMPN--VITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNEL 434
Query: 672 VTGYAAIGGKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMM 731
+ GY + V + G + + D +S++ R G F A ++++M
Sbjct: 435 IKGYCK-----SNVHKAMGVLNKMLERKVLP-DVVTYNSLIDGQCRSGNFDSAYRLLSLM 488
Query: 732 EEGKMFIDKYKYRTLF 747
+ + D++ Y ++
Sbjct: 489 NDRGLVPDQWTYTSMI 504
Score = 52.8 bits (125), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 62/286 (21%), Positives = 106/286 (37%), Gaps = 43/286 (15%)
Query: 431 GMLQKQVELIT-TEHGILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDA 489
GM++ V+++ E L P + Y +L+K + ++ K + E+ +V D
Sbjct: 407 GMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKSNVHKAMGVLNKMLER---KVLPDVV 463
Query: 490 ALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDA 549
+I G D A+ LL M+ G+ Y S++ + ++ R E L
Sbjct: 464 TYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSL 523
Query: 550 RSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKG-CAQNH 608
G+ + Y AL+ A HL E SK F L+ G CA
Sbjct: 524 EQKGVNPNVVMYTALIDGYCKAGKVDEA-HLMLEKMLSKNCLPNSLTFNALIHGLCADGK 582
Query: 609 --EAGLM---------------------------------AKLLQEVKEGQRIDCGVHDW 633
EA L+ ++ Q + G + D H +
Sbjct: 583 LKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPD--AHTY 640
Query: 634 NNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIG 679
I +C++ + DAE + +MR G P+ T+ S++ GY +G
Sbjct: 641 TTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLG 686
Score = 44.3 bits (103), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 52/253 (20%), Positives = 93/253 (36%), Gaps = 7/253 (2%)
Query: 501 LGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASC 560
G +D+ + EM V + Y ++ Y + E + AG+ D
Sbjct: 196 FGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFT 255
Query: 561 YEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEV 620
Y +L+ +KD A +F EM K R + L+ G L ++
Sbjct: 256 YTSLIMGYCQRKDLDSAFKVFNEMP-LKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKM 314
Query: 621 KEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGG 680
K+ + V + +I C +A +K M G PN T+ ++ +
Sbjct: 315 KDDECFP-TVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCS-QC 372
Query: 681 KYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFIDK 740
K+ + EL G+M ++ L++ + + G A +VV +ME K+ +
Sbjct: 373 KFEKARELLGQMLEKGLMPNVITYNALING----YCKRGMIEDAVDVVELMESRKLSPNT 428
Query: 741 YKYRTLFLKYHKT 753
Y L Y K+
Sbjct: 429 RTYNELIKGYCKS 441
Score = 40.8 bits (94), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 48/234 (20%), Positives = 94/234 (40%), Gaps = 20/234 (8%)
Query: 448 QPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQA 507
+P Y ++ + G+ + + K +EN VS D +I LG + A
Sbjct: 634 KPDAHTYTTFIQTYCREGRLLDAEDMMAKM-REN-GVSPDLFTYSSLIKGYGDLGQTNFA 691
Query: 508 HDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQS 567
D+L M G S + SL+K +E ++ + G + E S
Sbjct: 692 FDVLKRMRDTGCEPSQHTFLSLIKHLLE----------MKYGKQKGSEP-----ELCAMS 736
Query: 568 KIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRID 627
+++ DT + L ++M E + + + +E L+ G + + K+ ++ + I
Sbjct: 737 NMMEFDT--VVELLEKMVEHSVTPNA-KSYEKLILGICEVGNLRVAEKVFDHMQRNEGIS 793
Query: 628 CGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGK 681
+N ++ CK + +A K + M +GHLP ++ ++ G G K
Sbjct: 794 PSELVFNALLSCCCKLKKHNEAAKVVDDMICVGHLPQLESCKVLICGLYKKGEK 847
>gi|125569916|gb|EAZ11431.1| hypothetical protein OsJ_01299 [Oryza sativa Japonica Group]
Length = 563
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 50/235 (21%), Positives = 95/235 (40%), Gaps = 45/235 (19%)
Query: 448 QPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAAL---GHVITLCISLGWL 504
+P Y ++ + GK L++ ++ L+ + + GH G
Sbjct: 211 KPNVHTYTVMIGGYCREGKLARAEMLLVRMVEQGLKPNTNTYTTLIGGHC-----KGGSF 265
Query: 505 DQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEAL 564
D+A +L+++M G + Y +++ + + + +E +LR A S G++ D Y L
Sbjct: 266 DRAFELMNKMKQEGFLPNIYTYNAVIDGFCKKGKIQEAYKVLRMATSQGLKFDKITYTIL 325
Query: 565 LQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQ 624
+ Q AL LF M E+ GC + EA
Sbjct: 326 ITEHCKQGHITYALDLFDRMVEN---------------GCCPDIEA-------------- 356
Query: 625 RIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIG 679
+ ++I +C++R M++++K + +G LP QT+ SM+ GY +G
Sbjct: 357 --------YTSLISTYCQQRQMEESQKFFDKCLMIGLLPTKQTYTSMIAGYCKVG 403
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 54/269 (20%), Positives = 108/269 (40%), Gaps = 6/269 (2%)
Query: 484 VSHDDAALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVT 543
VS + G ++ +C G +++ LL M G ++ ++++ E R ++V+
Sbjct: 69 VSPMNRGFGALVVVCCREGKVEEVDALLAAMWRYGFSLDNATCTVVVRSLCEKGRFKDVS 128
Query: 544 ALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKG 603
R G + Y A + ++ A H+ +EM + + + L+ G
Sbjct: 129 EFFRRMLETGTPPNVVNYTAWIDGLCKRRYVKQAFHVLEEMVGRGLKPNVYTH-TTLIDG 187
Query: 604 CAQNHEAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLP 663
+ +L ++ + VH + +I +C++ + AE L RM G P
Sbjct: 188 LCKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCREGKLARAEMLLVRMVEQGLKP 247
Query: 664 NAQTFHSMVTGYAAIGGKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFAR 723
N T+ +++ G+ GG + EL +MK ++ ++D F + G
Sbjct: 248 NTNTYTTLIGGHCK-GGSFDRAFELMNKMKQEGFLPNIYTYNAVIDG----FCKKGKIQE 302
Query: 724 ANEVVAMMEEGKMFIDKYKYRTLFLKYHK 752
A +V+ M + DK Y L ++ K
Sbjct: 303 AYKVLRMATSQGLKFDKITYTILITEHCK 331
>gi|224130790|ref|XP_002328377.1| predicted protein [Populus trichocarpa]
gi|222838092|gb|EEE76457.1| predicted protein [Populus trichocarpa]
Length = 688
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 64/260 (24%), Positives = 111/260 (42%), Gaps = 18/260 (6%)
Query: 438 ELITTEHGILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQ---VSHDDAALGHV 494
E++ + H +P Y L+ +G T H K E+ + V+++ +
Sbjct: 188 EMVRSGH---EPDVISYNTLINGLCNSGNTNMAVHVFKKMEQNGCKPNVVTYNTI----I 240
Query: 495 ITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGI 554
+LC ++ A D L EM G+ + Y S++ + E T L + G
Sbjct: 241 DSLCKD-RLVNDAMDFLSEMVGRGIPPDAITYNSIVHGLCCLGQLNEATRLFKRMEQNGC 299
Query: 555 QLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGC--AQNHEAGL 612
+ D Y ++ S + A EM + IP +L C Q +EA
Sbjct: 300 KPDVVTYNIIIDSLYKDRLVNDAADFLSEMVDQGIPPDVVTYTTILHGLCYLGQLNEAIR 359
Query: 613 MAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMV 672
+ K +++ +G + D V +N +I CK RL+ DA + L M G PNA T+ +++
Sbjct: 360 LFKKMEQ--KGCKPD--VVAYNTIIDSLCKDRLVNDAMEFLSEMVDRGIPPNAVTYSTIL 415
Query: 673 TGYAAIGGKYTEVTELWGEM 692
G+ + G+ E T+L+ EM
Sbjct: 416 HGFCNL-GQLDEATQLFKEM 434
Score = 55.8 bits (133), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/210 (22%), Positives = 82/210 (39%), Gaps = 38/210 (18%)
Query: 484 VSHDDAALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVT 543
V+H +L +I L +D A + +M G++ + +L+ + +
Sbjct: 124 VTHTVYSLNILINCLCRLNHVDFAVSVWGKMFKLGIQPDVITFTTLINGVCNEGKIKVAV 183
Query: 544 ALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKG 603
L + +G + D Y L+ +T A+H+FK+M+++ G
Sbjct: 184 ELYNEMVRSGHEPDVISYNTLINGLCNSGNTNMAVHVFKKMEQN---------------G 228
Query: 604 CAQNHEAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLP 663
C N V +N +I CK RL+ DA L M G P
Sbjct: 229 CKPN----------------------VVTYNTIIDSLCKDRLVNDAMDFLSEMVGRGIPP 266
Query: 664 NAQTFHSMVTGYAAIGGKYTEVTELWGEMK 693
+A T++S+V G + G+ E T L+ M+
Sbjct: 267 DAITYNSIVHGLCCL-GQLNEATRLFKRME 295
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/252 (19%), Positives = 103/252 (40%), Gaps = 13/252 (5%)
Query: 447 LQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQ 506
+ P Y ++ G+ E K E++ + D A +I ++
Sbjct: 334 IPPDVVTYTTILHGLCYLGQLNEAIRLFKKMEQKGCK--PDVVAYNTIIDSLCKDRLVND 391
Query: 507 AHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQ 566
A + L EM G+ ++ Y+++L + + E T L ++ + + + L+
Sbjct: 392 AMEFLSEMVDRGIPPNAVTYSTILHGFCNLGQLDEATQLFKEMVGRNVMPNTLTFSILVD 451
Query: 567 SKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKG----CAQNHEAGLMAKLLQEVKE 622
+ A +F+ M E + + + + L+ G C N A+ + E+
Sbjct: 452 GLCQEGMVSEARWVFETMTEKGVEPNIYT-YNALMNGYCLRCKMNE-----ARKVFEIMV 505
Query: 623 GQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKY 682
G+ +H +N +I+ +C R M A+ L +M PN T+++++ G + G+
Sbjct: 506 GKGCAPDLHSYNILINGYCNSRRMDKAKALLTQMSVKKLTPNTVTYNTIMKGLCYV-GRL 564
Query: 683 TEVTELWGEMKS 694
+ EL+ +M S
Sbjct: 565 LDAQELFKKMCS 576
>gi|115473997|ref|NP_001060597.1| Os07g0671200 [Oryza sativa Japonica Group]
gi|22831126|dbj|BAC15987.1| putative crp1(chloroplast RNA processing 1) protein [Oryza sativa
Japonica Group]
gi|113612133|dbj|BAF22511.1| Os07g0671200 [Oryza sativa Japonica Group]
Length = 551
Score = 66.2 bits (160), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 55/247 (22%), Positives = 117/247 (47%), Gaps = 10/247 (4%)
Query: 502 GWLDQAHDLLDEMHLAGVRASSSVYASLL-KAYIEANRPREVTALLRDARSAGIQLDASC 560
G LD A DLL + + + + + AS++ Y ++ R LL + G++++A C
Sbjct: 121 GHLDTAADLLKQAATSCPDSVTPLSASVVVDGYCKSGRVAHARQLLDEMPRHGVKVNALC 180
Query: 561 YEALLQSKIVQKDTPGALHLFKEMKESKI-PRSGHQEFEMLVKGCAQNHEAGLMAKLLQE 619
Y +LL + +KD + K M+ I P G + +LV G + + + + +E
Sbjct: 181 YNSLLDAYTREKDDDRVAEMLKVMENEGIEPTVG--TYTILVDGLSAARDITKVEAVFEE 238
Query: 620 VKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIG 679
+K + + V+ +++VI+ +C+ ++ A + G PN T+ +++ G+ IG
Sbjct: 239 MKS-KNLSGDVYFYSSVINAYCRAGNVRRASEVFDECVGNGIEPNEHTYGALINGFCKIG 297
Query: 680 GKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFID 739
E E+ + + + ++ + ++++ + R +A E+ +ME+ + +D
Sbjct: 298 --QMEAAEM---LVTDMQVRGVGINQIVFNTMIDGYCRKNMVDKALEIKMIMEKMGIELD 352
Query: 740 KYKYRTL 746
Y Y TL
Sbjct: 353 VYTYNTL 359
>gi|222637660|gb|EEE67792.1| hypothetical protein OsJ_25528 [Oryza sativa Japonica Group]
Length = 475
Score = 66.2 bits (160), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 55/247 (22%), Positives = 117/247 (47%), Gaps = 10/247 (4%)
Query: 502 GWLDQAHDLLDEMHLAGVRASSSVYASLL-KAYIEANRPREVTALLRDARSAGIQLDASC 560
G LD A DLL + + + + + AS++ Y ++ R LL + G++++A C
Sbjct: 45 GHLDTAADLLKQAATSCPDSVTPLSASVVVDGYCKSGRVAHARQLLDEMPRHGVKVNALC 104
Query: 561 YEALLQSKIVQKDTPGALHLFKEMKESKI-PRSGHQEFEMLVKGCAQNHEAGLMAKLLQE 619
Y +LL + +KD + K M+ I P G + +LV G + + + + +E
Sbjct: 105 YNSLLDAYTREKDDDRVAEMLKVMENEGIEPTVG--TYTILVDGLSAARDITKVEAVFEE 162
Query: 620 VKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIG 679
+K + + V+ +++VI+ +C+ ++ A + G PN T+ +++ G+ IG
Sbjct: 163 MKS-KNLSGDVYFYSSVINAYCRAGNVRRASEVFDECVGNGIEPNEHTYGALINGFCKIG 221
Query: 680 GKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFID 739
E E+ + + + ++ + ++++ + R +A E+ +ME+ + +D
Sbjct: 222 --QMEAAEM---LVTDMQVRGVGINQIVFNTMIDGYCRKNMVDKALEIKMIMEKMGIELD 276
Query: 740 KYKYRTL 746
Y Y TL
Sbjct: 277 VYTYNTL 283
Score = 39.3 bits (90), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 48/247 (19%), Positives = 98/247 (39%), Gaps = 7/247 (2%)
Query: 447 LQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQ 506
++P E Y L+ F + G+ + + + + ++ +I +D+
Sbjct: 203 IEPNEHTYGALINGFCKIGQMEAAEMLVTDMQVRGVGINQ--IVFNTMIDGYCRKNMVDK 260
Query: 507 AHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQ 566
A ++ M G+ Y +L ANR E LLR G++ + Y L+
Sbjct: 261 ALEIKMIMEKMGIELDVYTYNTLACGLRRANRMDEAKNLLRIMIEKGVRPNHVSYTTLIS 320
Query: 567 SKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEV-KEGQR 625
+ D A LF+EM + S + +++ G + + E+ K+G
Sbjct: 321 IHCNEGDMVEARRLFREMAGNGAEPS-LVTYNVMMDGYIKKGSIREAERFKNEMEKKGLV 379
Query: 626 IDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEV 685
D ++ + ++H C + A + + M+ G PN + ++++G A G+ E
Sbjct: 380 PD--IYSYAALVHGHCVNGKVDVALRLFEEMKQRGSKPNLVAYTALISGLAK-EGRSEEA 436
Query: 686 TELWGEM 692
+L+ M
Sbjct: 437 FQLYDNM 443
>gi|125559559|gb|EAZ05095.1| hypothetical protein OsI_27286 [Oryza sativa Indica Group]
Length = 551
Score = 66.2 bits (160), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 55/247 (22%), Positives = 117/247 (47%), Gaps = 10/247 (4%)
Query: 502 GWLDQAHDLLDEMHLAGVRASSSVYASLL-KAYIEANRPREVTALLRDARSAGIQLDASC 560
G LD A DLL + + + + + AS++ Y ++ R LL + G++++A C
Sbjct: 121 GHLDTAADLLKQAATSCPDSVTPLSASVVVDGYCKSGRVAHARQLLDEMPRHGVKVNALC 180
Query: 561 YEALLQSKIVQKDTPGALHLFKEMKESKI-PRSGHQEFEMLVKGCAQNHEAGLMAKLLQE 619
Y +LL + +KD + K M+ I P G + +LV G + + + + +E
Sbjct: 181 YNSLLDAYTREKDDDRVAEMLKVMENEGIEPTVG--TYTILVDGLSAARDITKVEAVFEE 238
Query: 620 VKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIG 679
+K + + V+ +++VI+ +C+ ++ A + G PN T+ +++ G+ IG
Sbjct: 239 MKS-KNLSGDVYFYSSVINAYCRAGNVRRASEVFDECVGNGIEPNEHTYGALINGFCKIG 297
Query: 680 GKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFID 739
E E+ + + + ++ + ++++ + R +A E+ +ME+ + +D
Sbjct: 298 --QMEAAEM---LVTDMQVRGVGINQIVFNTMIDGYCRKNMVDKALEIKMIMEKMGIELD 352
Query: 740 KYKYRTL 746
Y Y TL
Sbjct: 353 VYTYNTL 359
Score = 39.3 bits (90), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 48/247 (19%), Positives = 99/247 (40%), Gaps = 7/247 (2%)
Query: 447 LQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQ 506
++P E Y L+ F + G+ + + + + ++ +I +D+
Sbjct: 279 IEPNEHTYGALINGFCKIGQMEAAEMLVTDMQVRGVGINQ--IVFNTMIDGYCRKNMVDK 336
Query: 507 AHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQ 566
A ++ M G+ Y +L ANR E LLR G++ + Y L+
Sbjct: 337 ALEIKMIMEKMGIELDVYTYNTLACGLRRANRMDEAKNLLRIMIEKGVRPNHVSYTTLIS 396
Query: 567 SKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEV-KEGQR 625
+ D A LF+EM + S + +++ G + + +E+ K+G
Sbjct: 397 IHCNEGDMVEARRLFREMAGNGAEPS-LVTYNVMMDGYIKKGSIREAERFKKEMEKKGLV 455
Query: 626 IDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEV 685
D ++ + ++H C + A + + M+ G PN + ++++G A G+ E
Sbjct: 456 PD--IYSYAALVHGHCVNGKVDVALRLFEEMKQRGSKPNLVAYTALISGLAK-EGRSEEA 512
Query: 686 TELWGEM 692
+L+ M
Sbjct: 513 FQLYDNM 519
>gi|22531122|gb|AAM97065.1| putative membrane-associated salt-inducible protein [Arabidopsis
thaliana]
gi|62320656|dbj|BAD95323.1| putative membrane-associated salt-inducible protein [Arabidopsis
thaliana]
Length = 596
Score = 66.2 bits (160), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 101/468 (21%), Positives = 183/468 (39%), Gaps = 109/468 (23%)
Query: 250 KPNTNTFNIALAGCLLFETTRKAEQLLDIMPRIGVKADSNLLIIMAHIYERNGRREELRK 309
+PN T+ + + G T A LL+ M ++AD ++I I + +
Sbjct: 184 QPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEAD---VVIFNTIIDSLCK------ 234
Query: 310 LQRHIDEAVNLSDIQFRQF-----------YNCLLSCHLKFGDLNSASKMVLEMLQRAKE 358
RH+D+A+NL F++ Y+ L+SC +G + AS+++ +M+++
Sbjct: 235 -YRHVDDALNL----FKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEK--- 286
Query: 359 ARNSLAAAMLPFNAVGVNNRTPSEQNVNCTNSVDLENSGIIENHILSYEDFTKDRKFVAL 418
+ ++ FNA+ + F K+ KFV
Sbjct: 287 ---KINPNLVTFNAL--------------------------------IDAFVKEGKFV-- 309
Query: 419 EAEVKRVLQTLLGMLQKQVELITTEHGILQPTEKIYIKLVKAFL---EAGKTKELTHFLI 475
EAE + M+++ ++ P Y LV F K K++ F++
Sbjct: 310 EAE-----KLYDDMIKRSID----------PDIFTYNSLVNGFCMHDRLDKAKQMFEFMV 354
Query: 476 KAEKENLQVSHDDAALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIE 535
+ V+++ G C S ++ +L EM G+ + Y +L++
Sbjct: 355 SKDCFPDVVTYNTLIKG----FCKS-KRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFH 409
Query: 536 ANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQ 595
+ + S G+ D Y LL AL +F M++S+I +
Sbjct: 410 DGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYI 469
Query: 596 EFEMLVKGCAQNHEAGLMAKLLQEVKEGQRIDCG---------VHDWNNVIHFFCKKRLM 646
M+ C +AG +V +G + C V +N +I C KRL+
Sbjct: 470 YTTMIEGMC----KAG-------KVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLL 518
Query: 647 QDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEMKS 694
Q+A LK+M+ G LPN+ T+++++ + G K EL EM+S
Sbjct: 519 QEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAAS-AELIREMRS 565
Score = 44.3 bits (103), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 41/176 (23%), Positives = 84/176 (47%), Gaps = 18/176 (10%)
Query: 561 YEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEV 620
Y +L++ + A+ LF M +S+ P EF L+ A+ + ++ L +++
Sbjct: 15 YREILRNGLHDMKLDDAIGLFGGMVKSR-PLPSIVEFNKLLSAIAKMKKFDVVISLGEKM 73
Query: 621 KEGQRIDC--GVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAI 678
QR++ G++ +N +I+ FC++ + A L +M LG+ P+ T S++ GY
Sbjct: 74 ---QRLEIVHGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCH- 129
Query: 679 GGKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFF--ARANEVVAMME 732
G + ++ L +M D++ +T + G F +A+E VA+++
Sbjct: 130 GKRISDAVALVDQMVEMGYRP---------DTITFTTLIHGLFLHNKASEAVALVD 176
>gi|15221515|ref|NP_176447.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75213223|sp|Q9SXD8.1|PPR90_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g62590
gi|5454201|gb|AAD43616.1|AC005698_15 T3P18.15 [Arabidopsis thaliana]
gi|332195860|gb|AEE33981.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 634
Score = 65.9 bits (159), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 101/468 (21%), Positives = 183/468 (39%), Gaps = 109/468 (23%)
Query: 250 KPNTNTFNIALAGCLLFETTRKAEQLLDIMPRIGVKADSNLLIIMAHIYERNGRREELRK 309
+PN T+ + + G T A LL+ M ++AD ++I I + +
Sbjct: 222 QPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEAD---VVIFNTIIDSLCK------ 272
Query: 310 LQRHIDEAVNLSDIQFRQF-----------YNCLLSCHLKFGDLNSASKMVLEMLQRAKE 358
RH+D+A+NL F++ Y+ L+SC +G + AS+++ +M+++
Sbjct: 273 -YRHVDDALNL----FKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEK--- 324
Query: 359 ARNSLAAAMLPFNAVGVNNRTPSEQNVNCTNSVDLENSGIIENHILSYEDFTKDRKFVAL 418
+ ++ FNA+ + F K+ KFV
Sbjct: 325 ---KINPNLVTFNAL--------------------------------IDAFVKEGKFV-- 347
Query: 419 EAEVKRVLQTLLGMLQKQVELITTEHGILQPTEKIYIKLVKAFL---EAGKTKELTHFLI 475
EAE + M+++ ++ P Y LV F K K++ F++
Sbjct: 348 EAE-----KLYDDMIKRSID----------PDIFTYNSLVNGFCMHDRLDKAKQMFEFMV 392
Query: 476 KAEKENLQVSHDDAALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIE 535
+ V+++ G C S ++ +L EM G+ + Y +L++
Sbjct: 393 SKDCFPDVVTYNTLIKG----FCKS-KRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFH 447
Query: 536 ANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQ 595
+ + S G+ D Y LL AL +F M++S+I +
Sbjct: 448 DGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYI 507
Query: 596 EFEMLVKGCAQNHEAGLMAKLLQEVKEGQRIDCG---------VHDWNNVIHFFCKKRLM 646
M+ C +AG +V +G + C V +N +I C KRL+
Sbjct: 508 YTTMIEGMC----KAG-------KVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLL 556
Query: 647 QDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEMKS 694
Q+A LK+M+ G LPN+ T+++++ + G K EL EM+S
Sbjct: 557 QEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAAS-AELIREMRS 603
Score = 44.3 bits (103), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 41/176 (23%), Positives = 84/176 (47%), Gaps = 18/176 (10%)
Query: 561 YEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEV 620
Y +L++ + A+ LF M +S+ P EF L+ A+ + ++ L +++
Sbjct: 53 YREILRNGLHDMKLDDAIGLFGGMVKSR-PLPSIVEFNKLLSAIAKMKKFDVVISLGEKM 111
Query: 621 KEGQRIDC--GVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAI 678
QR++ G++ +N +I+ FC++ + A L +M LG+ P+ T S++ GY
Sbjct: 112 ---QRLEIVHGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCH- 167
Query: 679 GGKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFF--ARANEVVAMME 732
G + ++ L +M D++ +T + G F +A+E VA+++
Sbjct: 168 GKRISDAVALVDQMVEMGYRP---------DTITFTTLIHGLFLHNKASEAVALVD 214
>gi|326508346|dbj|BAJ99440.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 819
Score = 65.9 bits (159), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 98/501 (19%), Positives = 211/501 (42%), Gaps = 40/501 (7%)
Query: 248 AMKPNTNTFNIALAGCLLFETTRKAEQLLDIMPRIGVKAD--SNLLIIMAHIYERNGRRE 305
A+ P+ T+N + C +KA +L M R GV D ++ +++ A +NG +
Sbjct: 218 AIPPSRATYNNVVNACGAAGNWKKALELCKKMIRNGVGPDLVTHNIVLSAF---KNGFQY 274
Query: 306 ELRKLQRHIDEAVNLSDIQFRQFYNCLLSCHLKFGDLNSASKMVLEMLQRAKEARNSLAA 365
+ + N++ F N ++ C +K G A +++L +E R +
Sbjct: 275 TKATGYFEMMKGANIAPDTFT--LNIVIHCLVKVGQHGDA----VDLLNSMREKRVQCSP 328
Query: 366 AMLPFNAVGVNNRTPSEQNVNCTNSVDLENSGIIENHILSYEDFTKDRKFVALEAEVKRV 425
++ + ++ +++ Q NC D+ + ++ +I+SY + E +
Sbjct: 329 DVVTYTSI-IHSYYVCGQVENCKAVFDMMVAEGVKPNIVSYNALLGAYASHGMHTEAFGI 387
Query: 426 LQTLLGMLQKQVELITTEHGILQPTEKIYIKLVKAFLEAG---KTKELTHFLIKAEKENL 482
+ L + L+P Y L+ A+ + K +E+ + + K +
Sbjct: 388 FKLL-------------KQNGLRPDVVSYTTLLNAYGRSAQPEKAREVFNEMRKNSCKPN 434
Query: 483 QVSHDDAALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREV 542
+VS++ +I S G +A LL EM G+ ++LL A + ++
Sbjct: 435 KVSYN-----ALIDAYGSAGMFKEAISLLHEMEKDGIPPDVVSISTLLAACGRCRQTTKI 489
Query: 543 TALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVK 602
+L A+ GI+L+ Y + + S + D AL L+ M S + + +L+
Sbjct: 490 DTVLEAAKFRGIELNIVAYNSGIGSYLSFGDYEKALKLYATMMASNV-NPDAVTYNILIS 548
Query: 603 GCAQNHEAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHL 662
G + + K +++ + RI ++++I + K+ + +AE M++ G
Sbjct: 549 GLCKLGKYAESLKFFEDMVD-LRIPLTKEVYSSLICSYVKQDKLAEAESTFINMKASGCF 607
Query: 663 PNAQTFHSMVTGYAAIGGKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFA 722
P+ T+ +M+ Y G +T V +L+ EM+ A + D + S++ +G +
Sbjct: 608 PDVLTYTAMIQAYTD-HGSWTSVWDLFKEMEGNA----ILPDAIICSSLMEALNKGNQYG 662
Query: 723 RANEVVAMMEEGKMFIDKYKY 743
R +++ M + + +++ Y
Sbjct: 663 RVLQLMKFMHDQCIQLNQKAY 683
Score = 48.9 bits (115), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 62/307 (20%), Positives = 122/307 (39%), Gaps = 19/307 (6%)
Query: 449 PTEKIYIKLVKAFLEAGKTKELTHF--LIKAEKENLQVSHDDAALGHVITLCISLGWLDQ 506
P Y ++ ++ G+ + ++ AE + +A LG S G +
Sbjct: 328 PDVVTYTSIIHSYYVCGQVENCKAVFDMMVAEGVKPNIVSYNALLGAYA----SHGMHTE 383
Query: 507 AHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQ 566
A + + G+R Y +LL AY + +P + + + R + + Y AL+
Sbjct: 384 AFGIFKLLKQNGLRPDVVSYTTLLNAYGRSAQPEKAREVFNEMRKNSCKPNKVSYNALID 443
Query: 567 SKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRI 626
+ A+ L EM++ IP L+ C + + + +L+ K + I
Sbjct: 444 AYGSAGMFKEAISLLHEMEKDGIP-PDVVSISTLLAACGRCRQTTKIDTVLEAAKF-RGI 501
Query: 627 DCGVHDWNNVIHFFCKKRLMQDAEKALK---RMRSLGHLPNAQTFHSMVTGYAAIGGKYT 683
+ + +N+ I + D EKALK M + P+A T++ +++G + GKY
Sbjct: 502 ELNIVAYNSGIGSYLS---FGDYEKALKLYATMMASNVNPDAVTYNILISGLCKL-GKYA 557
Query: 684 EVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFIDKYKY 743
E + + +M + +E+ S++ ++V+ A A M+ F D Y
Sbjct: 558 ESLKFFEDMVDL----RIPLTKEVYSSLICSYVKQDKLAEAESTFINMKASGCFPDVLTY 613
Query: 744 RTLFLKY 750
+ Y
Sbjct: 614 TAMIQAY 620
>gi|326513552|dbj|BAJ87795.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 538
Score = 65.9 bits (159), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 51/220 (23%), Positives = 105/220 (47%), Gaps = 11/220 (5%)
Query: 529 LLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESK 588
++ + +A R + LL + G++L+A CY LL + QK+ + KEM+
Sbjct: 139 VVDGFCKAGRMDDARRLLDEMPRHGVKLNACCYNPLLDTYTRQKNDARVAEVLKEMESGG 198
Query: 589 I-PRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQ 647
+ P G + +LV G + + + + E+K + + V+ ++ VI+ +C+ ++
Sbjct: 199 VEPTVG--TYTILVDGLSTAGDISKVESVFDEIKR-KNVAGDVYFYSAVINAYCRAGNVR 255
Query: 648 DAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTE-LWGEMKSFASSTSMNFDEE 706
A + G PN +T+ +++ G+ IG E E L +M+ + ++
Sbjct: 256 RASEVFDECVGNGIEPNERTYGALINGFCKIG--QIEAAEMLLTDMQ----LRGVGHNQI 309
Query: 707 LLDSVLYTFVRGGFFARANEVVAMMEEGKMFIDKYKYRTL 746
+ ++++ + R G +A E+ A+ME + +D Y Y TL
Sbjct: 310 IFNTMIDGYCRHGMVDKALEIKAVMERMGIQLDVYTYNTL 349
Score = 49.7 bits (117), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 50/247 (20%), Positives = 101/247 (40%), Gaps = 7/247 (2%)
Query: 447 LQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQ 506
++P E+ Y L+ F + G+ + L + V H+ +I G +D+
Sbjct: 269 IEPNERTYGALINGFCKIGQIEAAEMLLTDMQLRG--VGHNQIIFNTMIDGYCRHGMVDK 326
Query: 507 AHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQ 566
A ++ M G++ Y +L NR + LL G++ + Y L+
Sbjct: 327 ALEIKAVMERMGIQLDVYTYNTLACGLCRVNRMEDAKKLLHIMTENGVESNYVSYTTLIS 386
Query: 567 SKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEV-KEGQR 625
+ D A LF++M E K R + +++ G ++ + +E+ K+G
Sbjct: 387 IHSKEGDMVEARRLFRDM-EGKGSRPSVVTYNVMIDGYIKSGSIREAERFKKEMEKKGLV 445
Query: 626 IDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEV 685
D V+ + ++H C + A + + M+ G PN + ++++G A G+ E
Sbjct: 446 PD--VYTYAALVHGHCVNGKVDVALRLFEEMKQRGAKPNVVAYTALISGLAK-EGRSEEA 502
Query: 686 TELWGEM 692
+ + M
Sbjct: 503 FQFYDNM 509
>gi|225445222|ref|XP_002280919.1| PREDICTED: pentatricopeptide repeat-containing protein At5g21222
[Vitis vinifera]
gi|297738818|emb|CBI28063.3| unnamed protein product [Vitis vinifera]
Length = 636
Score = 65.9 bits (159), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 58/242 (23%), Positives = 111/242 (45%), Gaps = 14/242 (5%)
Query: 442 TEHGILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISL 501
TE G +PT Y L+ A + K + + K EK L+ D +I
Sbjct: 98 TEEG-HRPTLITYTTLLAALTRQKRFKSIPSLISKLEKNGLK--PDSVFFNAMINAFSES 154
Query: 502 GWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLR-DARSAGIQLDASC 560
G + +A + +M G + ++S + +L+K Y A P E LL ++ ++ +
Sbjct: 155 GNVKEAMKIFRKMKDRGCKPTTSTFNTLIKGYGNAGMPEECLKLLDLMSQEENVKPNDRT 214
Query: 561 YEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEV 620
+ +L+++ +K A ++ +M S + + + L + AQN E ++ E+
Sbjct: 215 FNSLIRAWCNKKRITEAWNVVYKMAASGL-QPDVVTYNTLARAYAQNGETSRAEGMILEM 273
Query: 621 KEGQRI----DCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYA 676
+ + + CG+ +I+ +CK+ M+DA + L RMR+ G PN F+S++ G+
Sbjct: 274 QNNRVMPNERTCGI-----IINGYCKEGKMKDALRFLYRMRNYGVHPNLVIFNSLIKGFL 328
Query: 677 AI 678
I
Sbjct: 329 DI 330
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 37/186 (19%), Positives = 84/186 (45%), Gaps = 1/186 (0%)
Query: 494 VITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAG 553
++ + I G +A + + + G R + Y +LL A R + + +L+ G
Sbjct: 77 LMNILIEKGKPQEAQLIFNSLTEEGHRPTLITYTTLLAALTRQKRFKSIPSLISKLEKNG 136
Query: 554 IQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLM 613
++ D+ + A++ + + A+ +F++MK+ + F L+KG
Sbjct: 137 LKPDSVFFNAMINAFSESGNVKEAMKIFRKMKDRGC-KPTTSTFNTLIKGYGNAGMPEEC 195
Query: 614 AKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVT 673
KLL + + + + +N++I +C K+ + +A + +M + G P+ T++++
Sbjct: 196 LKLLDLMSQEENVKPNDRTFNSLIRAWCNKKRITEAWNVVYKMAASGLQPDVVTYNTLAR 255
Query: 674 GYAAIG 679
YA G
Sbjct: 256 AYAQNG 261
Score = 52.8 bits (125), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 62/298 (20%), Positives = 116/298 (38%), Gaps = 27/298 (9%)
Query: 447 LQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQ 506
+ P I+ L+K FL+ T + L E+ V D ++ S+G +D+
Sbjct: 313 VHPNLVIFNSLIKGFLDITDTDGVDEALTLMEE--FGVKPDVVTFSTIMNAWSSVGLMDK 370
Query: 507 AHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQ 566
++ D+M AG+ ++ L K Y+ A P + +LL +G+Q + + ++
Sbjct: 371 CQEIFDDMVKAGIEPDIHAFSILAKGYVRAGEPEKAESLLTAMGKSGVQPNVVIFTTIIS 430
Query: 567 SKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRI 626
A ++++M E I + FE L+ G + E +LLQ +++
Sbjct: 431 GWCSAGKMEYASRVYEKMCEMGIC-PNLKTFETLIWGYGEAKEPQKAEELLQIMEQK--- 486
Query: 627 DCGVHDWNNVIHFFCK-----------KRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGY 675
GV + I KR+ D E+A K M S A +
Sbjct: 487 --GVAPVKSTIQLVADAWHALGLANEAKRIKNDVEEAPKVMISTKEDDVAAESLERIYQK 544
Query: 676 AAIGGKYTEVTELWG-EMKSFASSTSMNFDEELL-------DSVLYTFVRGGFFARAN 725
+ Y+++ ++ G M ST+ N ++ L+T + F A+A+
Sbjct: 545 QNLKASYSDIVQVPGIVMTDQNGSTAANIRSRMIMKGPGSPPENLWTATKSMFLAQAS 602
>gi|413920484|gb|AFW60416.1| hypothetical protein ZEAMMB73_230014 [Zea mays]
Length = 700
Score = 65.9 bits (159), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 52/234 (22%), Positives = 108/234 (46%), Gaps = 6/234 (2%)
Query: 447 LQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQ 506
++P Y L+ + + +++ EK + S + +I + G L++
Sbjct: 400 IRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSGVDPSVE--TFNTLIDAYGTAGQLEK 457
Query: 507 AHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQ 566
+L +M G+++ + S++KA+ + + E A+L D + +A Y +++
Sbjct: 458 CFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIID 517
Query: 567 SKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVK-EGQR 625
+ I DT A L ++MK S + S + +L+KG ++ + +L+ ++ +G R
Sbjct: 518 AYIESGDTEQAFLLVEKMKNSGVSAS-IVTYNLLLKGLCRSSQIDEAEELIYTLRNQGLR 576
Query: 626 IDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIG 679
D V +N +I C K A + L+ M G P +T+H++V+ A+ G
Sbjct: 577 PD--VVSYNTIISACCNKGDTDKALELLQEMNKYGIRPTLRTYHTLVSALASAG 628
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 85/378 (22%), Positives = 152/378 (40%), Gaps = 36/378 (9%)
Query: 248 AMKPNTNTFNIALAGCLLFETTRKAEQLLDIMPRIGVKADSNLLIIMAHIYERNGRREEL 307
+M P+ T++I G +R L + GV + I+ + ++G+ +
Sbjct: 294 SMFPDGFTYSILFDGLTRTGESRTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGK---V 350
Query: 308 RKLQRHIDEAVNLSDIQFRQFYNCLLSCHLKFGDLNSASKMVLEMLQRAKEARNSLAAAM 367
K ++ ++ V+ + YN L++ + + DL A + +M R +
Sbjct: 351 AKAEQVLEMLVHTGLVPTTVIYNTLINGYCQVRDLRGAFCIFEQMKSR------HIRPDH 404
Query: 368 LPFNAVGVNNRTPSEQNVNCTNSV-DLENSGIIENHILSYEDFTKDRKFVALEAEVKRVL 426
+ +NA+ +N E + V ++E SG+ S E F ++++
Sbjct: 405 ITYNAL-INGLCKLEMVTKAEDLVMEMEKSGVDP----SVETFNTLIDAYGTAGQLEKCF 459
Query: 427 QTLLGMLQKQVELITTEHGILQPTEKIYIKLVKAFLEAGKTKE----LTHFLIKAEKENL 482
L M QK ++ G +VKAF + GK E L + K N
Sbjct: 460 TVLSDMQQKGIKSDVISFG----------SVVKAFCKNGKIPEAVAILDDMIYKDVAPNA 509
Query: 483 QVSHDDAALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREV 542
QV + +I I G +QA L+++M +GV AS Y LLK +++ E
Sbjct: 510 QVYN------SIIDAYIESGDTEQAFLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEA 563
Query: 543 TALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVK 602
L+ R+ G++ D Y ++ + + DT AL L +EM + I R + + LV
Sbjct: 564 EELIYTLRNQGLRPDVVSYNTIISACCNKGDTDKALELLQEMNKYGI-RPTLRTYHTLVS 622
Query: 603 GCAQNHEAGLMAKLLQEV 620
A M L Q++
Sbjct: 623 ALASAGRVHDMECLYQQM 640
Score = 43.9 bits (102), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 62/308 (20%), Positives = 123/308 (39%), Gaps = 64/308 (20%)
Query: 329 YNCLLSCHLKFGDLNSASKMVLEMLQRAKEARNSLAAAMLPFNAVGVNNRTPSEQNVNC- 387
YN L++ K + A +V+EM ++ + ++ FN + ++ + Q C
Sbjct: 407 YNALINGLCKLEMVTKAEDLVMEM------EKSGVDPSVETFNTL-IDAYGTAGQLEKCF 459
Query: 388 TNSVDLENSGIIENHILSYEDFTKDRKFVALEAEVKRVLQTLLGMLQKQVELITTEHGIL 447
T D++ GI ++ ++S+ K ++ + L M+ K V
Sbjct: 460 TVLSDMQQKGI-KSDVISFGSVVK---AFCKNGKIPEAVAILDDMIYKDV---------- 505
Query: 448 QPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSH--------------------- 486
P ++Y ++ A++E+G T++ FL+ + +N VS
Sbjct: 506 APNAQVYNSIIDAYIESGDTEQ--AFLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEA 563
Query: 487 --------------DDAALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKA 532
D + +I+ C + G D+A +LL EM+ G+R + Y +L+ A
Sbjct: 564 EELIYTLRNQGLRPDVVSYNTIISACCNKGDTDKALELLQEMNKYGIRPTLRTYHTLVSA 623
Query: 533 YIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIP-- 590
A R ++ L + ++ +S Y ++ + + ++ L KEM E I
Sbjct: 624 LASAGRVHDMECLYQQMLHKNVEPSSSIYGIMVDAYVRCENDSKVASLKKEMSEKGIAFD 683
Query: 591 ---RSGHQ 595
RS H+
Sbjct: 684 DTKRSNHE 691
>gi|224142151|ref|XP_002324422.1| predicted protein [Populus trichocarpa]
gi|222865856|gb|EEF02987.1| predicted protein [Populus trichocarpa]
Length = 453
Score = 65.9 bits (159), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 50/228 (21%), Positives = 105/228 (46%), Gaps = 4/228 (1%)
Query: 448 QPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQA 507
+PT Y LV A K + + K E+ ++ D +I G + +A
Sbjct: 45 KPTLITYTTLVAALTRQKLFKSILRLISKVEENGMK--PDSILFNSIINAFSESGNMKEA 102
Query: 508 HDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQS 567
L +M +G + ++S + +L+K Y A + E LL + G++ + Y L+++
Sbjct: 103 MKLFRKMKESGCKPTTSTFNTLIKGYGNAGKTEEALKLLEFLQDGGVKPNQRTYNILVRA 162
Query: 568 KIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRID 627
+++ A ++ +M S + + + L + A+ E +++ E+ +R+
Sbjct: 163 WCNKENMEEAWNMVYKMVASGM-QPDAVTYNTLARAYAEKGETIRAEEMILEML-NRRVT 220
Query: 628 CGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGY 675
+ +++ +CK+ M DA + + RM+ LG LPN F+S++ G+
Sbjct: 221 PNERTCSIIVNGYCKEGNMVDASRFVFRMKELGVLPNLFVFNSLIKGF 268
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/191 (22%), Positives = 89/191 (46%), Gaps = 12/191 (6%)
Query: 494 VITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAG 553
++ + I G +AH + + + G + + Y +L+ A + + L+ G
Sbjct: 19 LMNVLIGKGKPREAHSIFNSLMDEGHKPTLITYTTLVAALTRQKLFKSILRLISKVEENG 78
Query: 554 IQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKG---CAQNHEA 610
++ D+ + +++ + + A+ LF++MKES + F L+KG + EA
Sbjct: 79 MKPDSILFNSIINAFSESGNMKEAMKLFRKMKESGC-KPTTSTFNTLIKGYGNAGKTEEA 137
Query: 611 GLMAKLLQE--VKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTF 668
+ + LQ+ VK QR +N ++ +C K M++A + +M + G P+A T+
Sbjct: 138 LKLLEFLQDGGVKPNQRT------YNILVRAWCNKENMEEAWNMVYKMVASGMQPDAVTY 191
Query: 669 HSMVTGYAAIG 679
+++ YA G
Sbjct: 192 NTLARAYAEKG 202
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/234 (21%), Positives = 98/234 (41%), Gaps = 12/234 (5%)
Query: 447 LQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQ 506
+QP Y L +A+ E G+T ++ E N +V+ ++ ++ G +
Sbjct: 184 MQPDAVTYNTLARAYAEKGETIRAEEMIL--EMLNRRVTPNERTCSIIVNGYCKEGNMVD 241
Query: 507 AHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQ 566
A + M GV + V+ SL+K +++ V +L G++ D + ++
Sbjct: 242 ASRFVFRMKELGVLPNLFVFNSLIKGFLDTMDTEGVDEVLTLMEENGVRPDVVTFSTIMN 301
Query: 567 SKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRI 626
+ +F +M +++I H F +L KG + E +L +++
Sbjct: 302 AWSSAGRMDKCKEIFNDMVKAEIEPDIHA-FSILAKGYVRAGEPEKAESILTSMRK---- 356
Query: 627 DCGVHD----WNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYA 676
GVH VI +C M+ A K ++M +G PN +T+ +++ GY
Sbjct: 357 -YGVHPNVVICTTVISGWCSAGKMEHAMKVYEKMCEIGVSPNLKTYETLIWGYG 409
Score = 48.9 bits (115), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 74/374 (19%), Positives = 137/374 (36%), Gaps = 63/374 (16%)
Query: 250 KPNTNTFNIALAGCLLFETTRKAEQLLDIMPRIGVKADSNLLIIMAHIY-ERNGRREELR 308
KP T+TFN + G T +A +LL+ + GVK + I+ + + E
Sbjct: 115 KPTTSTFNTLIKGYGNAGKTEEALKLLEFLQDGGVKPNQRTYNILVRAWCNKENMEEAWN 174
Query: 309 KLQRHIDEAVNLSDIQFRQFYNCLLSCHLKFGDLNSASKMVLEMLQRAKEARNSLAAAML 368
+ + + + + YN L + + G+ A +M+LEML R
Sbjct: 175 MVYKMVASGMQPDAVT----YNTLARAYAEKGETIRAEEMILEMLNR------------- 217
Query: 369 PFNAVGVNNRTPSEQNVNCTNSVDLENSGIIENHILSYEDFTKDRKFVALEAEVKRVLQT 428
V N RT S II N + +FV E
Sbjct: 218 ---RVTPNERTCS----------------IIVNGYCKEGNMVDASRFVFRMKE------- 251
Query: 429 LLGMLQKQVELITTEHGILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDD 488
LG+L P ++ L+K FL+ T+ + L E+ V D
Sbjct: 252 -LGVL---------------PNLFVFNSLIKGFLDTMDTEGVDEVLTLMEENG--VRPDV 293
Query: 489 AALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRD 548
++ S G +D+ ++ ++M A + ++ L K Y+ A P + ++L
Sbjct: 294 VTFSTIMNAWSSAGRMDKCKEIFNDMVKAEIEPDIHAFSILAKGYVRAGEPEKAESILTS 353
Query: 549 ARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNH 608
R G+ + ++ A+ ++++M E + + +E L+ G +
Sbjct: 354 MRKYGVHPNVVICTTVISGWCSAGKMEHAMKVYEKMCEIGV-SPNLKTYETLIWGYGEAK 412
Query: 609 EAGLMAKLLQEVKE 622
+ +LLQ ++E
Sbjct: 413 QPLKAEELLQVMEE 426
>gi|48716454|dbj|BAD23061.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein-like
[Oryza sativa Japonica Group]
Length = 580
Score = 65.9 bits (159), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 100/232 (43%), Gaps = 11/232 (4%)
Query: 521 ASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHL 580
ASS++ +L K+ + A + + R AG+ ++ Y A+L + D A L
Sbjct: 147 ASSALLTALAKSRMTATARKVFDQMTR----AGVAMNTHVYNAMLHVCLKAGDAALAESL 202
Query: 581 FKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFF 640
M + +P ++ C + + M ++E E Q + V WN++IH
Sbjct: 203 MTRMDAAGVPLDRFSFNTVIALYCRKGMQYEAMC--VRERMENQGVKADVVTWNSLIHGL 260
Query: 641 CKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEMKSFASSTS 700
CK+R +++A + L+ M G P+ T+ ++V GY G E +L GEM++
Sbjct: 261 CKERRVKEASQLLREMAMAGVAPDHVTYTTLVDGYCR-AGDLEEAVKLRGEMEAMG---- 315
Query: 701 MNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFIDKYKYRTLFLKYHK 752
M +++L G N ++ M+E K+ D TL Y K
Sbjct: 316 MLPGVATYNAILRKLCEDGKMKEVNVLLNEMDERKVQADHVTCNTLINAYCK 367
Score = 48.1 bits (113), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 79/339 (23%), Positives = 135/339 (39%), Gaps = 24/339 (7%)
Query: 442 TEHGILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISL 501
T G+ T +Y ++ L+AG + + + + + D + VI L
Sbjct: 172 TRAGVAMNTH-VYNAMLHVCLKAGDAALAESLMTRMDAAGVPL--DRFSFNTVIALYCRK 228
Query: 502 GWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCY 561
G +A + + M GV+A + SL+ + R +E + LLR+ AG+ D Y
Sbjct: 229 GMQYEAMCVRERMENQGVKADVVTWNSLIHGLCKERRVKEASQLLREMAMAGVAPDHVTY 288
Query: 562 EALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVK 621
L+ D A+ L EM+ + G + +++ ++ + + LL E+
Sbjct: 289 TTLVDGYCRAGDLEEAVKLRGEMEAMGM-LPGVATYNAILRKLCEDGKMKEVNVLLNEMD 347
Query: 622 EGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGK 681
E +++ N +I+ +CK+ M A K +RM G + T+ ++V G+ +
Sbjct: 348 E-RKVQADHVTCNTLINAYCKRGDMTSALKVKRRMMESGLQLDQFTYKALVHGFCK-AKE 405
Query: 682 YTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVA-------MMEEG 734
E E EM + S N+ SVL V G N VA +M+ G
Sbjct: 406 LDEAKEALFEM--MGAGFSPNY------SVLSWIVDG--LCNKNNAVAVLAIPDELMKRG 455
Query: 735 KMFIDKYKYRTLFLKYHKTLYKGKTPKFQTEAQLKKREA 773
DK YR+L + K + E Q K EA
Sbjct: 456 -FPPDKAVYRSLIRRLCKKGFIDLAGNVFNEMQGKGLEA 493
Score = 43.1 bits (100), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 55/248 (22%), Positives = 98/248 (39%), Gaps = 9/248 (3%)
Query: 447 LQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQ 506
+ P Y LV + AG +E ++ E E + + A ++ G + +
Sbjct: 281 VAPDHVTYTTLVDGYCRAGDLEEAVK--LRGEMEAMGMLPGVATYNAILRKLCEDGKMKE 338
Query: 507 AHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQ 566
+ LL+EM V+A +L+ AY + + R +G+QLD Y+AL+
Sbjct: 339 VNVLLNEMDERKVQADHVTCNTLINAYCKRGDMTSALKVKRRMMESGLQLDQFTYKALVH 398
Query: 567 SKIVQKDTPGALH-LFKEMKESKIPRSGHQEFEMLVKG-CAQNHEAGLMAKLLQEVKEGQ 624
K+ A LF+ M P + +V G C +N+ ++A + +K G
Sbjct: 399 GFCKAKELDEAKEALFEMMGAGFSP--NYSVLSWIVDGLCNKNNAVAVLAIPDELMKRGF 456
Query: 625 RIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTE 684
D V + ++I CKK + A M+ G + + ++ Y GK
Sbjct: 457 PPDKAV--YRSLIRRLCKKGFIDLAGNVFNEMQGKGLEADCLVYATLACAY-LTAGKPVA 513
Query: 685 VTELWGEM 692
++ EM
Sbjct: 514 ALDILNEM 521
>gi|125548275|gb|EAY94097.1| hypothetical protein OsI_15870 [Oryza sativa Indica Group]
Length = 554
Score = 65.9 bits (159), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 50/235 (21%), Positives = 95/235 (40%), Gaps = 45/235 (19%)
Query: 448 QPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAAL---GHVITLCISLGWL 504
+P Y ++ + GK L++ ++ L+ + + GH G
Sbjct: 311 KPNVHTYTVMIGGYCREGKLARAEMLLVRMVEQGLKPNTNTYTTLIGGHC-----KGGSF 365
Query: 505 DQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEAL 564
D+A +L+++M G + Y +++ + + + +E +LR A S G++ D Y L
Sbjct: 366 DRAFELMNKMKQEGFLPNIYTYNAVIDGFCKKGKIQEAYKVLRMATSQGLKFDKITYTIL 425
Query: 565 LQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQ 624
+ Q AL LF M E+ GC + EA
Sbjct: 426 ITEHCKQGHITYALDLFDRMVEN---------------GCCPDIEA-------------- 456
Query: 625 RIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIG 679
+ ++I +C++R M++++K + +G LP QT+ SM+ GY +G
Sbjct: 457 --------YTSLISTYCQQRQMEESQKFFDKCLMIGLLPTKQTYTSMIAGYCKVG 503
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 53/269 (19%), Positives = 108/269 (40%), Gaps = 6/269 (2%)
Query: 484 VSHDDAALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVT 543
V D+ + ++ +C G +++ LL M G ++ ++++ E R ++V+
Sbjct: 169 VCPDERSFRALVVVCCREGKVEEVDALLAAMWRYGFSLDNATCTVVVRSLCEKGRFKDVS 228
Query: 544 ALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKG 603
R G + Y A + ++ A H+ +EM + + + L+ G
Sbjct: 229 EFFRRMLEMGTPPNVVNYTAWIDGLCKRRYVKQAFHVLEEMVGRGLKPNVYTH-TTLIDG 287
Query: 604 CAQNHEAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLP 663
+ +L ++ + VH + +I +C++ + AE L RM G P
Sbjct: 288 LCKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCREGKLARAEMLLVRMVEQGLKP 347
Query: 664 NAQTFHSMVTGYAAIGGKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFAR 723
N T+ +++ G+ GG + EL +MK ++ ++D F + G
Sbjct: 348 NTNTYTTLIGGHCK-GGSFDRAFELMNKMKQEGFLPNIYTYNAVIDG----FCKKGKIQE 402
Query: 724 ANEVVAMMEEGKMFIDKYKYRTLFLKYHK 752
A +V+ M + DK Y L ++ K
Sbjct: 403 AYKVLRMATSQGLKFDKITYTILITEHCK 431
>gi|115470153|ref|NP_001058675.1| Os07g0101200 [Oryza sativa Japonica Group]
gi|50508922|dbj|BAD31827.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
gi|113610211|dbj|BAF20589.1| Os07g0101200 [Oryza sativa Japonica Group]
Length = 738
Score = 65.9 bits (159), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 68/324 (20%), Positives = 126/324 (38%), Gaps = 17/324 (5%)
Query: 431 GMLQKQVELITTEHGILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAA 490
G L + V L+ P Y L++ + +E H+L + N DD
Sbjct: 238 GRLPEAVRLVDGMRAYAVPDVVTYNTLIRGLCKKSMPQEAMHYLRRMM--NQGCLPDDFT 295
Query: 491 LGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDAR 550
+I + + +A +LL + G Y SL+ L +A+
Sbjct: 296 YNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQ 355
Query: 551 SAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKG-CAQNHE 609
+ GI+ D Y +L++ +Q AL + EM E Q + +++ G C +
Sbjct: 356 AKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGC-HPDIQTYNIVINGLCKMGNI 414
Query: 610 AGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFH 669
+ + + +G D V +N +I +CK+ + A + ++RM G P+ T++
Sbjct: 415 SDATVVMNDAIMKGYLPD--VFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYN 472
Query: 670 SMVTGYAAIGGKYTEVTELWGEM---KSFASSTSMNFDEELLDSVLYTFVRGGFFARANE 726
S++ G GK EV E + EM + + N ++ F R A++
Sbjct: 473 SVLNGLCK-AGKVNEVNETFQEMILKGCHPNPITYNI-------LIENFCRSNKMEEASK 524
Query: 727 VVAMMEEGKMFIDKYKYRTLFLKY 750
V+ M + + D + TL +
Sbjct: 525 VIVKMSQEGLHPDAVSFNTLIYGF 548
Score = 45.8 bits (107), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 71/336 (21%), Positives = 133/336 (39%), Gaps = 44/336 (13%)
Query: 430 LGMLQKQVELITTE--HGILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQ---V 484
+ M+Q+ EL+ G + P + Y L+ G + +A+ + ++ V
Sbjct: 306 ISMVQEATELLKDAVFKGFV-PDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIV 364
Query: 485 SHDDAALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTA 544
++ G LC+ G + A +++EM G Y ++ + + T
Sbjct: 365 VYNSLVKG----LCLQ-GLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATV 419
Query: 545 LLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGC 604
++ DA G D + L+ + AL L + M E I + ++ G
Sbjct: 420 VMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDT-ITYNSVLNGL 478
Query: 605 AQNHEAGLMAKLLQEVKEGQRIDCGVH----DWNNVIHFFCKKRLMQDAEKALKRMRSLG 660
+ + + + QE+ I G H +N +I FC+ M++A K + +M G
Sbjct: 479 CKAGKVNEVNETFQEM-----ILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEG 533
Query: 661 HLPNAQTFHSMVTGYAAIG---GKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVR 717
P+A +F++++ G+ G G Y +L E K + S+T+ F+ +
Sbjct: 534 LHPDAVSFNTLIYGFCRNGDLEGAYLLFQKL--EEKGY-SATADTFNTLI---------- 580
Query: 718 GGFFARANEVVA------MMEEGKMFIDKYKYRTLF 747
G F + N +A M+ +G D Y YR L
Sbjct: 581 GAFSGKLNMHMAEKIFDEMLSKGHR-ADSYTYRVLI 615
>gi|297838419|ref|XP_002887091.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297332932|gb|EFH63350.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 568
Score = 65.9 bits (159), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 58/270 (21%), Positives = 115/270 (42%), Gaps = 17/270 (6%)
Query: 482 LQVSHDDAALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPRE 541
++V D + G VI C G ++++ DLL E+ G + +Y +L+ + +
Sbjct: 157 IKVDLDVYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKRGEIEK 216
Query: 542 VTALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLV 601
L + G+ + Y L+ ++++M+E + + + ++
Sbjct: 217 AKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEDGVFPNLYTYNCVMN 276
Query: 602 KGCAQNHEAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGH 661
+ C KL E++E + + C + +N +I C++ +A K + +M+S G
Sbjct: 277 QHCKDGRTKDAF-KLFDEMRE-RGVSCNIVTYNTLIGGLCREMKANEANKVMDQMKSDGI 334
Query: 662 LPNAQTFHSMVTGYAAIGGKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFF 721
PN T+++++ G+ + GK + L ++KS S S+ V Y + GF
Sbjct: 335 NPNLITYNTLIDGFCGV-GKLGKALSLCRDLKSRGLSPSL---------VTYNILVSGFC 384
Query: 722 AR-----ANEVVAMMEEGKMFIDKYKYRTL 746
+ A +VV MEE + K Y L
Sbjct: 385 KKGDTSGAGKVVKEMEERGIKPSKITYTIL 414
Score = 65.9 bits (159), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 84/180 (46%), Gaps = 6/180 (3%)
Query: 505 DQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEAL 564
++A+ ++D+M G+ + Y +L+ + + + +L RD +S G+ Y L
Sbjct: 320 NEANKVMDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNIL 379
Query: 565 LQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQ--NHEAGLMAKLLQEVKE 622
+ + DT GA + KEM+E I S + +L+ A+ N E + L+ E
Sbjct: 380 VSGFCKKGDTSGAGKVVKEMEERGIKPS-KITYTILIDTFARMDNMEKAIQ---LRSPME 435
Query: 623 GQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKY 682
+ VH ++ +IH FC K M +A + K M + PN +++MV GY G Y
Sbjct: 436 ELGLTPDVHTYSVLIHGFCIKGQMNEASRLFKLMVAKKLEPNKVIYNTMVLGYCKEGSSY 495
Score = 46.2 bits (108), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 83/421 (19%), Positives = 152/421 (36%), Gaps = 68/421 (16%)
Query: 247 IAMKPNTNTFNIALAGCLLFETTRKAEQLLDIMPRIGVKADSNLLIIMAHIYERNGRREE 306
PN + + GC KA+ L M + G+ A+ ++ H +NG +++
Sbjct: 192 FGFSPNVVIYTTLIDGCCKRGEIEKAKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQ 251
Query: 307 LRKLQRHIDEAVNLSDIQFRQFYNCLLSCHLKFGDLNSASKMVLEMLQRAKEARNSLAAA 366
++ + E ++ YNC+++ H K G A K+ EM +R ++
Sbjct: 252 GFEMYEKMQEDGVFPNLYT---YNCVMNQHCKDGRTKDAFKLFDEMRERG------VSCN 302
Query: 367 MLPFNA-VGVNNRTPSEQNVNCTNSV-DLENSGIIENHILSYEDFTKDRKFVALEAEVKR 424
++ +N +G R E N N V D S I ++++Y F +
Sbjct: 303 IVTYNTLIGGLCR---EMKANEANKVMDQMKSDGINPNLITYNTLIDG--FCGV------ 351
Query: 425 VLQTLLGMLQKQVELITT-EHGILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQ 483
G L K + L + L P+ Y LV F + G
Sbjct: 352 ------GKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKG------------------ 387
Query: 484 VSHDDAALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVT 543
D + G V+ EM G++ S Y L+ + + +
Sbjct: 388 ---DTSGAGKVV----------------KEMEERGIKPSKITYTILIDTFARMDNMEKAI 428
Query: 544 ALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKG 603
L G+ D Y L+ ++ A LFK M K+ + +V G
Sbjct: 429 QLRSPMEELGLTPDVHTYSVLIHGFCIKGQMNEASRLFKLMVAKKL-EPNKVIYNTMVLG 487
Query: 604 CAQNHEAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLP 663
+ + +L +E++E + + V + +I CK+R ++AE +++M G P
Sbjct: 488 YCKEGSSYRALRLFREMEE-KELPPNVASYRYMIEVLCKERKSKEAEGLVEKMIDTGIDP 546
Query: 664 N 664
+
Sbjct: 547 S 547
>gi|218191860|gb|EEC74287.1| hypothetical protein OsI_09537 [Oryza sativa Indica Group]
Length = 689
Score = 65.9 bits (159), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 56/232 (24%), Positives = 100/232 (43%), Gaps = 11/232 (4%)
Query: 521 ASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHL 580
ASS++ +L K+ + A + + R AG+ ++ Y A+L + D A L
Sbjct: 239 ASSALLTALAKSRMTATARKVFDQMTR----AGVAMNTHVYNAMLHVCLKAGDAALAESL 294
Query: 581 FKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFF 640
M + +P ++ C + + M ++E E Q + V WN++IH
Sbjct: 295 MTRMDAAGVPLDRFSFNTVIALYCRKGMQYEAMC--VRERMENQGVKADVVTWNSLIHGL 352
Query: 641 CKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEMKSFASSTS 700
CK+R +++A + L+ M G P+ T+ ++V GY G E +L GEM++
Sbjct: 353 CKERRVKEASQLLREMAMAGVAPDHVTYTTLVDGYCR-AGDLEEAVKLRGEMEAMGMLPG 411
Query: 701 MNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFIDKYKYRTLFLKYHK 752
+ +++L G N ++ M+E K+ D TL Y K
Sbjct: 412 V----ATYNAILRKLCEDGKMKEVNVLLNEMDERKVQADHVTCNTLINAYCK 459
Score = 48.9 bits (115), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 53/234 (22%), Positives = 100/234 (42%), Gaps = 5/234 (2%)
Query: 442 TEHGILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISL 501
T G+ T +Y ++ L+AG + + + + + D + VI L
Sbjct: 264 TRAGVAMNTH-VYNAMLHVCLKAGDAALAESLMTRMDAAGVPL--DRFSFNTVIALYCRK 320
Query: 502 GWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCY 561
G +A + + M GV+A + SL+ + R +E + LLR+ AG+ D Y
Sbjct: 321 GMQYEAMCVRERMENQGVKADVVTWNSLIHGLCKERRVKEASQLLREMAMAGVAPDHVTY 380
Query: 562 EALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVK 621
L+ D A+ L EM E+ G + +++ ++ + + LL E+
Sbjct: 381 TTLVDGYCRAGDLEEAVKLRGEM-EAMGMLPGVATYNAILRKLCEDGKMKEVNVLLNEMD 439
Query: 622 EGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGY 675
E +++ N +I+ +CK+ M A K +RM G + T+ ++V G+
Sbjct: 440 E-RKVQADHVTCNTLINAYCKRGDMTSALKVKRRMMESGLQLDQFTYKALVHGF 492
Score = 44.7 bits (104), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 80/374 (21%), Positives = 136/374 (36%), Gaps = 41/374 (10%)
Query: 327 QFYNCLLSCHLKFGDLNSASKMVLEMLQRAKEARNSLAAAMLPFNAVGVNN------RTP 380
YN +L LK GD A ++ M AA +P + N R
Sbjct: 273 HVYNAMLHVCLKAGDAALAESLMTRM-----------DAAGVPLDRFSFNTVIALYCRKG 321
Query: 381 SEQNVNCTNSVDLENSGIIENHILSYEDFTKDRKFVALEAEVKRVLQTLLGMLQKQVELI 440
+ C +EN G+ + ++++ + E VK Q L M V
Sbjct: 322 MQYEAMCVRE-RMENQGV-KADVVTWNSLIHG---LCKERRVKEASQLLREMAMAGV--- 373
Query: 441 TTEHGILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCIS 500
P Y LV + AG +E ++ E E + + A ++
Sbjct: 374 -------APDHVTYTTLVDGYCRAGDLEEAVK--LRGEMEAMGMLPGVATYNAILRKLCE 424
Query: 501 LGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASC 560
G + + + LL+EM V+A +L+ AY + + R +G+QLD
Sbjct: 425 DGKMKEVNVLLNEMDERKVQADHVTCNTLINAYCKRGDMTSALKVKRRMMESGLQLDQFT 484
Query: 561 YEALLQSKIVQKDTPGALH-LFKEMKESKIPRSGHQEFEMLVKG-CAQNHEAGLMAKLLQ 618
Y+AL+ K+ A LF+ M P + +V G C +N+ ++A +
Sbjct: 485 YKALVHGFCKAKELDEAKEALFEMMGAGFSP--NYSVLSWIVDGLCNKNNAVAVLAIPDE 542
Query: 619 EVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAI 678
+K G D V + ++I CKK + A M+ G + + ++ Y
Sbjct: 543 LMKRGFPPDKAV--YRSLIRRLCKKGFIDLAGNVFNEMQGKGLEADCLVYATLACAYLT- 599
Query: 679 GGKYTEVTELWGEM 692
GK ++ EM
Sbjct: 600 AGKPVAALDILNEM 613
>gi|357118714|ref|XP_003561096.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g39710-like [Brachypodium distachyon]
Length = 718
Score = 65.9 bits (159), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 57/233 (24%), Positives = 100/233 (42%), Gaps = 8/233 (3%)
Query: 449 PTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQAH 508
P Y LV AF AG+ + L+ +E V V+ G ++ A
Sbjct: 188 PNVVTYNTLVAAFCRAGEV-DAAERLVGVMREG-GVRPSLVTFNTVVNGLCKAGRMEDAR 245
Query: 509 DLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSK 568
+ DEM G+ Y +L+ Y +A E A+ + G+ D + +L+ +
Sbjct: 246 KMFDEMAREGLTPDGVSYNTLVSGYCKAGCLHEALAVFAEMAQKGVVPDVVTFTSLIHAM 305
Query: 569 IVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQ--RI 626
+ A+ L +M+E + R F L+ G +N G + L +KE + RI
Sbjct: 306 CRAGNLERAVALVGQMRERGL-RMNEFTFTALIDGFCRN---GFLDDALLAMKEMRECRI 361
Query: 627 DCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIG 679
V +N +I+ +CK M +A + + M + G P+ T+ ++++GY IG
Sbjct: 362 QPSVVCYNVLINGYCKLGRMDEARELIHEMEAKGMKPDVVTYSTILSGYCKIG 414
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 50/231 (21%), Positives = 102/231 (44%), Gaps = 6/231 (2%)
Query: 445 GILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWL 504
G ++P+ + +V +AG+ ++ + +E L + D + +++ G L
Sbjct: 219 GGVRPSLVTFNTVVNGLCKAGRMEDARKMFDEMAREGL--TPDGVSYNTLVSGYCKAGCL 276
Query: 505 DQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEAL 564
+A + EM GV + SL+ A A AL+ R G++++ + AL
Sbjct: 277 HEALAVFAEMAQKGVVPDVVTFTSLIHAMCRAGNLERAVALVGQMRERGLRMNEFTFTAL 336
Query: 565 LQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVK-EG 623
+ AL KEM+E +I S + +L+ G + +L+ E++ +G
Sbjct: 337 IDGFCRNGFLDDALLAMKEMRECRIQPS-VVCYNVLINGYCKLGRMDEARELIHEMEAKG 395
Query: 624 QRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTG 674
+ D V ++ ++ +CK A + ++M G +P+A T+ S++ G
Sbjct: 396 MKPD--VVTYSTILSGYCKIGDTDSAFELNRKMLKKGVVPDAITYSSLIRG 444
Score = 46.6 bits (109), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 89/410 (21%), Positives = 158/410 (38%), Gaps = 40/410 (9%)
Query: 272 AEQLLDIMPRIGVKADSNLLIIMAHIYERNGRREELRKL----QRHIDEAVNLSDIQFRQ 327
A +LL M R GV + I+ G+REE + R A N+
Sbjct: 138 ARRLLASMLRDGVAPNVYTYNILVRALCARGQREEALGVVGDDMRGAGCAPNVVT----- 192
Query: 328 FYNCLLSCHLKFGDLNSASKMVLEMLQRAKEARNSLAAAMLPFNAVGVNNRTPSEQNVNC 387
YN L++ + G++++A ++V M R R SL + FN V VN + + +
Sbjct: 193 -YNTLVAAFCRAGEVDAAERLVGVM--REGGVRPSL----VTFNTV-VNGLCKAGRMEDA 244
Query: 388 TNSVD-LENSGIIENHILSYEDFTKDRKFVALEAEVKRVLQTLLGMLQKQVELITTEHGI 446
D + G+ + + SY E L M QK V
Sbjct: 245 RKMFDEMAREGLTPDGV-SYNTLVSGYCKAGCLHEA---LAVFAEMAQKGV--------- 291
Query: 447 LQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQ 506
P + L+ A AG + + + + L++ ++ +I G+LD
Sbjct: 292 -VPDVVTFTSLIHAMCRAGNLERAVALVGQMRERGLRM--NEFTFTALIDGFCRNGFLDD 348
Query: 507 AHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQ 566
A + EM ++ S Y L+ Y + R E L+ + + G++ D Y +L
Sbjct: 349 ALLAMKEMRECRIQPSVVCYNVLINGYCKLGRMDEARELIHEMEAKGMKPDVVTYSTILS 408
Query: 567 SKIVQKDTPGALHLFKEM-KESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKE-GQ 624
DT A L ++M K+ +P + + L++G + G +L +++ + G
Sbjct: 409 GYCKIGDTDSAFELNRKMLKKGVVPDA--ITYSSLIRGLCEERRLGDACELFEKMLQLGL 466
Query: 625 RIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTG 674
+ D + +I CK+ +Q A M G LP+ T+ ++ G
Sbjct: 467 QPD--EFTYTTLIDGHCKEGNVQKALSLHDEMIKKGVLPDVVTYSVLIDG 514
Score = 45.8 bits (107), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 100/428 (23%), Positives = 161/428 (37%), Gaps = 56/428 (13%)
Query: 251 PNTNTFNIALAGCLLFETTRKAEQLLDIMPRIGVKADSNLLIIMAHIYERNGRREELRKL 310
PN T+N +A AE+L+ +M GV+ + + + GR E+ RK+
Sbjct: 188 PNVVTYNTLVAAFCRAGEVDAAERLVGVMREGGVRPSLVTFNTVVNGLCKAGRMEDARKM 247
Query: 311 QRHIDEAVNLSDIQFRQFYNCLLSCHLKFGDLNSASKMVLEMLQRAKEAR----NSLAAA 366
DE YN L+S + K G L+ A + EM Q+ SL A
Sbjct: 248 ---FDEMAREGLTPDGVSYNTLVSGYCKAGCLHEALAVFAEMAQKGVVPDVVTFTSLIHA 304
Query: 367 MLPFNAVGVNNRTPSEQNVNCTNSVDLENSGIIENHILSYEDFTKDRKFVALEAEVKR-- 424
M + N +V L G + L +FT F AL R
Sbjct: 305 MC--------------RAGNLERAVAL--VGQMRERGLRMNEFT----FTALIDGFCRNG 344
Query: 425 -VLQTLLGMLQKQVELITTEHGILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQ 483
+ LL M + + I QP+ Y L+ + + G+ E + + E + ++
Sbjct: 345 FLDDALLAMKEMRECRI-------QPSVVCYNVLINGYCKLGRMDEARELIHEMEAKGMK 397
Query: 484 VSHDDAALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVT 543
D +++ +G D A +L +M GV + Y+SL++ E R +
Sbjct: 398 --PDVVTYSTILSGYCKIGDTDSAFELNRKMLKKGVVPDAITYSSLIRGLCEERRLGDAC 455
Query: 544 ALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEM-KESKIPRSGHQEFEMLVK 602
L G+Q D Y L+ + + AL L EM K+ +P + +L+
Sbjct: 456 ELFEKMLQLGLQPDEFTYTTLIDGHCKEGNVQKALSLHDEMIKKGVLPDV--VTYSVLID 513
Query: 603 G---CAQNHEAG-LMAKLLQEVKEGQRID-------CGVHDWNNVIHF---FCKKRLMQD 648
G A+ EA L+ KL E I C ++ +V+ F K LM
Sbjct: 514 GLSKSARTKEAQRLLFKLYYEDPVPDNIKYEALMHCCRTAEFKSVVALLKGFSMKGLMNQ 573
Query: 649 AEKALKRM 656
A+K + M
Sbjct: 574 ADKVYQSM 581
>gi|193806393|sp|P0C7Q7.1|PPR38_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial; Flags: Precursor
Length = 602
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 78/309 (25%), Positives = 123/309 (39%), Gaps = 16/309 (5%)
Query: 442 TEHGILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISL 501
E+G QP Y +V +G T L K E+ N V D +I
Sbjct: 185 VENGC-QPDVVTYNSIVNGICRSGDTSLALDLLRKMEERN--VKADVFTYSTIIDSLCRD 241
Query: 502 GWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCY 561
G +D A L EM G+++S Y SL++ +A + + LL+D S I + +
Sbjct: 242 GCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITF 301
Query: 562 EALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKG-CAQNH--EAGLMAKLLQ 618
LL + + A L+KEM I + L+ G C QN EA M L+
Sbjct: 302 NVLLDVFVKEGKLQEANELYKEMITRGIS-PNIITYNTLMDGYCMQNRLSEANNMLDLMV 360
Query: 619 EVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAI 678
K I + ++I +C + + D K + + G + NA T+ +V G+
Sbjct: 361 RNKCSPDI----VTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQ- 415
Query: 679 GGKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFI 738
GK EL+ EM S + LLD + G +A E+ +++ KM +
Sbjct: 416 SGKIKLAEELFQEMVSHGVLPDVMTYGILLDGL----CDNGKLEKALEIFEDLQKSKMDL 471
Query: 739 DKYKYRTLF 747
Y T+
Sbjct: 472 GIVMYTTII 480
Score = 49.3 bits (116), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 82/188 (43%), Gaps = 7/188 (3%)
Query: 560 CYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQE 619
C+ L+S IV A+ LF+EM S+ P +F A+ + L+ ++
Sbjct: 55 CFRERLRSGIVDIKKDDAIALFQEMIRSR-PLPSLVDFSRFFSAIARTKQFNLVLDFCKQ 113
Query: 620 VKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIG 679
+ E I ++ N +I+ FC+ A L ++ LG+ P+ TF++++ G +
Sbjct: 114 L-ELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGL-FLE 171
Query: 680 GKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFID 739
GK +E L M D +S++ R G + A +++ MEE + D
Sbjct: 172 GKVSEAVVLVDRMVENGCQP----DVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKAD 227
Query: 740 KYKYRTLF 747
+ Y T+
Sbjct: 228 VFTYSTII 235
Score = 48.5 bits (114), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 39/177 (22%), Positives = 75/177 (42%), Gaps = 4/177 (2%)
Query: 504 LDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEA 563
L +A+++LD M + SL+K Y R + + R+ G+ +A Y
Sbjct: 349 LSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSI 408
Query: 564 LLQSKIVQKDTPGALHLFKEM-KESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKE 622
L+Q A LF+EM +P + +L+ G N + ++ +++++
Sbjct: 409 LVQGFCQSGKIKLAEELFQEMVSHGVLPDV--MTYGILLDGLCDNGKLEKALEIFEDLQK 466
Query: 623 GQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIG 679
++D G+ + +I CK ++DA + G PN T+ M++G G
Sbjct: 467 -SKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKG 522
Score = 46.6 bits (109), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 42/209 (20%), Positives = 94/209 (44%), Gaps = 3/209 (1%)
Query: 504 LDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEA 563
+D + + G+ A++ Y+ L++ + ++ + + L ++ S G+ D Y
Sbjct: 384 VDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGI 443
Query: 564 LLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEG 623
LL AL +F+++++SK+ G + +++G + + L +
Sbjct: 444 LLDGLCDNGKLEKALEIFEDLQKSKMDL-GIVMYTTIIEGMCKGGKVEDAWNLFCSL-PC 501
Query: 624 QRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYT 683
+ + V + +I CKK + +A L++M G+ PN T+++++ + G T
Sbjct: 502 KGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLR-DGDLT 560
Query: 684 EVTELWGEMKSFASSTSMNFDEELLDSVL 712
+L EMKS S + + ++D +L
Sbjct: 561 ASAKLIEEMKSCGFSADASSIKMVIDMLL 589
>gi|186510147|ref|NP_188293.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75274280|sp|Q9LUR2.1|PP238_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g16710, mitochondrial; Flags: Precursor
gi|11994626|dbj|BAB02763.1| unnamed protein product [Arabidopsis thaliana]
gi|332642334|gb|AEE75855.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 507
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/252 (22%), Positives = 106/252 (42%), Gaps = 15/252 (5%)
Query: 447 LQPTEKIYIKLVKAFLEAGK---TKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGW 503
++P + L+ AF++ GK KEL + +I+ + V D G +I G
Sbjct: 254 IEPNVITFTALIDAFVKVGKLMEAKELYNVMIQ-----MSVYPDVFTYGSLINGLCMYGL 308
Query: 504 LDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEA 563
LD+A + M G + +Y +L+ + ++ R + + + G+ + Y
Sbjct: 309 LDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTV 368
Query: 564 LLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKG--CAQNHEAGLMAKLLQEVK 621
L+Q + A +F +M + P + + +L+ G C E LM + E
Sbjct: 369 LIQGYCLVGRPDVAQEVFNQMSSRRAP-PDIRTYNVLLDGLCCNGKVEKALM---IFEYM 424
Query: 622 EGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGK 681
+ +D + + +I CK ++DA + S G PN T+ +M++G+ G
Sbjct: 425 RKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCR-RGL 483
Query: 682 YTEVTELWGEMK 693
E L+ +MK
Sbjct: 484 IHEADSLFKKMK 495
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 91/213 (42%), Gaps = 13/213 (6%)
Query: 504 LDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEA 563
L+ A +L ++M G R + Y +L+ E R + LLRD I+ + + A
Sbjct: 204 LNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTA 263
Query: 564 LLQSKIVQKDTPGALHLFKEMKESKIPRSGHQE---FEMLVKGCAQNHEAGLMAKLLQEV 620
L+ + + G L KE+ I S + + + L+ G GL+ + Q
Sbjct: 264 LIDAFV----KVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCM---YGLLDEARQMF 316
Query: 621 KEGQRIDCGVHD--WNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAI 678
+R C ++ + +IH FCK + ++D K M G + N T+ ++ GY +
Sbjct: 317 YLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLV 376
Query: 679 GGKYTEVTELWGEMKSFASSTSMNFDEELLDSV 711
G+ E++ +M S + + LLD +
Sbjct: 377 -GRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGL 408
Score = 42.0 bits (97), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 59/245 (24%), Positives = 96/245 (39%), Gaps = 11/245 (4%)
Query: 504 LDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQ-LDASCYE 562
+ A DL M + S + LL + NR V +L + GI L +C
Sbjct: 64 FNDALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCNI 123
Query: 563 ALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKG-CAQNHEAGLMAKLLQEVK 621
+ + + + L K MK P F L+ G C N +A Q +
Sbjct: 124 VMHCVCLSSQPCRASCFLGKMMKLGFEP--DLVTFTSLLNGYCHWNRIEDAIALFDQILG 181
Query: 622 EGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGK 681
G + + V + +I CK R + A + +M + G PN T++++VTG IG
Sbjct: 182 MGFKPN--VVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRW 239
Query: 682 YTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFIDKY 741
L MK + F L+D+ FV+ G A E+ +M + ++ D +
Sbjct: 240 GDAAWLLRDMMKRRIEPNVITF-TALIDA----FVKVGKLMEAKELYNVMIQMSVYPDVF 294
Query: 742 KYRTL 746
Y +L
Sbjct: 295 TYGSL 299
>gi|297739653|emb|CBI29835.3| unnamed protein product [Vitis vinifera]
Length = 852
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 96/492 (19%), Positives = 205/492 (41%), Gaps = 36/492 (7%)
Query: 248 AMKPNTNTFNIALAGCLLFETTRKAEQLLDIMPRIGVKADSNLLIIMAHIYERNGRREEL 307
A+ P+ +T+N + C ++A + M GV D I+ Y+R +
Sbjct: 227 AIPPSRSTYNNLINACGSSGNWKEALNVCKKMTENGVGPDLVTHNIVLSAYKRGN---QY 283
Query: 308 RKLQRHIDEAVNLSDIQFRQFYNCLLSCHLKFGDLNSASKMVLEMLQRAKEARNSLAAAM 367
K+ + + + N ++ C +K G A +++ KE R+ +
Sbjct: 284 SKVLSYFELMKGTNIRPDTTTLNIVIYCLVKLGQNGKA----IDIFNSMKEKRSECYPDV 339
Query: 368 LPFNAVGVNNRTPSEQNVNCTNSVDLENSGIIENHILSYEDFTKDRKFVALEAEVKRVLQ 427
+ F + ++ + Q NC + + + ++ +I+SY ++ E V
Sbjct: 340 VTFTTI-IHLYSVCGQIENCQTAFNTMLAEGLKPNIVSYNALIGAYASHGMDKEAFSVFN 398
Query: 428 TLLGMLQKQVELITTEHGILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHD 487
+ ++G P Y L+ A+ ++GK ++ E ++ +H
Sbjct: 399 EI------------KKNG-FHPDVVSYTSLLNAYGKSGKPEKAMKVF-----ELMRRNHC 440
Query: 488 DAAL---GHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTA 544
L +I S G L +A ++L EM GV+ + +LL A + ++ +
Sbjct: 441 KPNLVSYNALIDAYGSKGLLTEAVEILHEMERNGVQPNIVSICTLLAACGRCGQKVKIKS 500
Query: 545 LLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGC 604
+L A GI+L+ + Y + + S + + AL L++ M+ K+ + + +L+ GC
Sbjct: 501 VLSAAELRGIKLNTTAYNSAIGSYLSVGEYDKALSLYRAMRTKKV-KPDPVTYNVLISGC 559
Query: 605 AQNHEAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPN 664
+ + G L E+ + +I +++VI + K+ + +AE +M+ +G P+
Sbjct: 560 CKMSKYGEALGFLDEMMD-LKIPLSKEVYSSVICAYSKQGQVTEAESMFTKMKMVGCRPD 618
Query: 665 AQTFHSMVTGYAAIGGKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARA 724
T+ +M+ Y + + + + L+ EM+ + + D S++ F +GG A+
Sbjct: 619 VITYTAMIHAY-DVAENWEKASALFLEME----TDDVQPDSIACSSLMRAFNKGGQPAKV 673
Query: 725 NEVVAMMEEGKM 736
+ M E K+
Sbjct: 674 LVLAEFMREKKI 685
Score = 42.4 bits (98), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 35/175 (20%), Positives = 76/175 (43%), Gaps = 4/175 (2%)
Query: 507 AHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQ 566
A +++D+M A + S S Y +L+ A + +E + + G+ D + +L
Sbjct: 216 AMNIMDDMLRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTENGVGPDLVTHNIVLS 275
Query: 567 SKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRI 626
+ L F+ MK + I R +++ + + G + +KE +R
Sbjct: 276 AYKRGNQYSKVLSYFELMKGTNI-RPDTTTLNIVIYCLVKLGQNGKAIDIFNSMKE-KRS 333
Query: 627 DC--GVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIG 679
+C V + +IH + +++ + A M + G PN ++++++ YA+ G
Sbjct: 334 ECYPDVVTFTTIIHLYSVCGQIENCQTAFNTMLAEGLKPNIVSYNALIGAYASHG 388
>gi|302791141|ref|XP_002977337.1| hypothetical protein SELMODRAFT_107186 [Selaginella moellendorffii]
gi|300154707|gb|EFJ21341.1| hypothetical protein SELMODRAFT_107186 [Selaginella moellendorffii]
Length = 636
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 102/468 (21%), Positives = 186/468 (39%), Gaps = 45/468 (9%)
Query: 251 PNTNTFNIALAGCLLFETTRKAEQLLDIMPRIGVKADSNLLIIMAHIYERNGRREELRKL 310
PN T+N+ + G +A LL M G+ + + H + R + + KL
Sbjct: 40 PNEWTYNVLINGFCKVHKVHRAYLLLKEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKL 99
Query: 311 QRHIDEAVNLSDIQFRQFYNCLLSCHLKFGDLNSASKMVLEM----LQRAKEARNSLAAA 366
R + E + ++ YN LLS + G ++ A +++ EM LQ K + ++L A
Sbjct: 100 FRQMVENGCMPNLVT---YNTLLSGLCRNGLMDEAYELLDEMRERGLQPDKFSYDTLMAG 156
Query: 367 MLPFNAVGV---------NNRTPSEQNVNCTNSVDLENSGIIENHILSYEDFTKDRKFVA 417
+ + + N P + T L +G ++ +E ++ +
Sbjct: 157 LCKTGKIDMALKVFEDNSNGDCPPDVVAYSTLIAGLCKTGRLDEACKLFEKMREN----S 212
Query: 418 LEAEVKRVLQTLLGML------QKQVELITTEHGILQPTEKIYIKLVKAFLEAGKTKE-- 469
E +V + G+ + Q L T E P Y L+ + G+ ++
Sbjct: 213 CEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCTPNVITYSSLIDGLCKTGQVRDAQ 272
Query: 470 --LTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYA 527
+++ + N+ V+++ G +T +D A L++EM G Y
Sbjct: 273 EVFKRMIVRGIEPNV-VTYNSLIHGFCMT-----NGVDSALLLMEEMTATGCLPDIITYN 326
Query: 528 SLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEM-KE 586
+L+ + R E L D ++ D Y L+ + A LF +M K+
Sbjct: 327 TLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIGGFCKLERIDMARTLFDDMLKQ 386
Query: 587 SKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRIDCG--VHDWNNVIHFFCKKR 644
+ +P F LV+G AGL+ + ++E DC V+ + +++ FCK
Sbjct: 387 AVLPDV--VTFSTLVEGYCN---AGLVDDAERLLEEMVASDCSPDVYTYTSLVDGFCKVG 441
Query: 645 LMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEM 692
M +A + LKRM G PN T+ +++ + GK T +L EM
Sbjct: 442 RMVEARRVLKRMAKRGCQPNVVTYTALIDAFCR-AGKPTVAYKLLEEM 488
Score = 43.9 bits (102), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 67/173 (38%), Gaps = 4/173 (2%)
Query: 449 PTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQAH 508
P Y LV F + G+ E L + K Q + +I G A+
Sbjct: 425 PDVYTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQ--PNVVTYTALIDAFCRAGKPTVAY 482
Query: 509 DLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALL-RDARSAGIQLDASCYEALLQS 567
LL+EM GV+ + Y SL+ + E +L R R + D Y ++
Sbjct: 483 KLLEEMVGNGVQPNVITYRSLIGGFCGTGDLEEARKMLERLERDENCKADMFAYRVMMDG 542
Query: 568 KIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEV 620
AL L + +K+S P H + L++G Q E G ++L+E+
Sbjct: 543 LCRTGRMSAALELLEAIKQSGTPPR-HDIYVALIRGLCQGKELGKAMEVLEEM 594
Score = 41.6 bits (96), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 54/121 (44%), Gaps = 5/121 (4%)
Query: 633 WNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEM 692
+N +I+ FCK + A LK M+ G PN T+ +++ G+ + T+V +
Sbjct: 45 YNVLINGFCKVHKVHRAYLLLKEMKESGLAPNVVTYSTVIHGFC----RQTKVDTAYKLF 100
Query: 693 KSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFIDKYKYRTLFLKYHK 752
+ + M + +++L R G A E++ M E + DK+ Y TL K
Sbjct: 101 RQMVENGCMP-NLVTYNTLLSGLCRNGLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCK 159
Query: 753 T 753
T
Sbjct: 160 T 160
>gi|326501502|dbj|BAK02540.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 673
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/250 (22%), Positives = 108/250 (43%), Gaps = 5/250 (2%)
Query: 445 GILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWL 504
G ++P + Y L+K +++ G K H L E V+ D+A ++ G
Sbjct: 298 GEIKPRTRAYNALLKGYVKIGSLKNAEHVL--DEMSECGVAPDEATYSLLVDAYTRAGRW 355
Query: 505 DQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEAL 564
+ A LL EM GV+ SS V++ +L + + ++ A+LR+ ++G+Q D Y +
Sbjct: 356 ESARILLKEMEADGVKPSSYVFSRILAGFRDRGDWQKAFAVLREMHASGVQPDRHFYNVM 415
Query: 565 LQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQ 624
+ + A+ +F M+ I + L+ + +L +E++E
Sbjct: 416 IDTFGKYNCLGHAMDVFNRMRGEGI-EPDVVTWNTLIDAHCKGGRHDCAMELFKEMRESN 474
Query: 625 RIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTE 684
G +N +I+ ++ E + M+ G +PN T+ ++V Y G+Y E
Sbjct: 475 -CPPGTTTYNIMINLLGEQERWVGVETMMSEMKEQGLVPNIITYTTLVDVYGR-SGRYKE 532
Query: 685 VTELWGEMKS 694
+ MK+
Sbjct: 533 AIDCIEAMKA 542
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 90/387 (23%), Positives = 155/387 (40%), Gaps = 45/387 (11%)
Query: 249 MKPNTNTFNIALAGCLLFETTRKAEQLLDIMPRIGVKADSNLLIIMAHIYERNGRREELR 308
+KP T +N L G + + + AE +LD M GV D ++ Y R GR E R
Sbjct: 300 IKPRTRAYNALLKGYVKIGSLKNAEHVLDEMSECGVAPDEATYSLLVDAYTRAGRWESAR 359
Query: 309 KLQRHID-EAVNLSDIQFRQFYNCLLSCHLKFGDLNSASKMVLEM----LQRAKEARNSL 363
L + ++ + V S F + +L+ GD A ++ EM +Q + N +
Sbjct: 360 ILLKEMEADGVKPSSYVFSR----ILAGFRDRGDWQKAFAVLREMHASGVQPDRHFYNVM 415
Query: 364 AAAMLPFNAVG----VNNRTPSE----QNVNCTNSVDLENSGIIENHILSYEDFTKDRKF 415
+N +G V NR E V +D G H + E F + R+
Sbjct: 416 IDTFGKYNCLGHAMDVFNRMRGEGIEPDVVTWNTLIDAHCKG--GRHDCAMELFKEMRES 473
Query: 416 VALEAEVK-RVLQTLLGMLQKQVELITT-----EHGILQPTEKIYIKLVKAFLEAGKTKE 469
++ LLG ++ V + T E G++ P Y LV + +G+ KE
Sbjct: 474 NCPPGTTTYNIMINLLGEQERWVGVETMMSEMKEQGLV-PNIITYTTLVDVYGRSGRYKE 532
Query: 470 LTHFLIKAEKENLQVSHDDAALGH-VITLCISLGWLDQAHDLLDEMHLAGVRASSSVYAS 528
+ + + L+ S + H ++ G D A +++ M G+ AS+ V S
Sbjct: 533 AIDCIEAMKADGLKPS---PTMYHALVNAYAQRGLADHALNVVKAMRADGLEASTVVLNS 589
Query: 529 LLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESK 588
L+ A+ E R E ++L+ + + D Y L+++ L + + K
Sbjct: 590 LINAFGEDRRVVEAFSVLQFMKENDFRPDVITYTTLMKA------------LIRVEQFDK 637
Query: 589 IPRSGHQEFEMLVKGCAQNHEAGLMAK 615
+P EM+ GCA + +A M +
Sbjct: 638 VPVIYE---EMITSGCAPDRKARAMLR 661
>gi|255572227|ref|XP_002527053.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223533615|gb|EEF35353.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 677
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 66/275 (24%), Positives = 106/275 (38%), Gaps = 7/275 (2%)
Query: 484 VSHDDAALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVT 543
VS D + +I + G LDQA +M +G+ + +Y L+ Y E
Sbjct: 321 VSPDLISFSSLIGVSSRNGHLDQALMYFRDMKTSGLVPDNVIYTILINGYCRNGMMSEAL 380
Query: 544 ALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKG 603
+ G LD Y +L +K A LF EM E + F L+ G
Sbjct: 381 EIRDKMLEQGCALDVVAYNTILNGLCKKKLLADANALFDEMVERGVV-PDFCTFTTLIHG 439
Query: 604 CAQNHEAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLP 663
+ G L + + + I + +N +I FCK M+ A + M S P
Sbjct: 440 HCKEGNMGKALSLFGIMTQ-KNIKPDIVTYNILIDGFCKTTEMEKANELWNEMISRKIFP 498
Query: 664 NAQTFHSMVTGYAAIGGKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFAR 723
N ++ +V GY + G +E LW EM ++ ++V+ + R G ++
Sbjct: 499 NHISYAILVNGYCNL-GFVSEAFRLWDEMIRKGIKPTL----VTCNTVIKGYCRSGDLSK 553
Query: 724 ANEVVAMMEEGKMFIDKYKYRTLFLKYHKTLYKGK 758
A+E + M + D Y TL + K Y K
Sbjct: 554 ADEFLGKMISEGVGPDSITYNTLINGFVKGEYMDK 588
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 61/254 (24%), Positives = 108/254 (42%), Gaps = 25/254 (9%)
Query: 506 QAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALL 565
+A + +EM G+ ++ Y +LL N E + D G+ D + +L+
Sbjct: 273 RAKGVFNEMLSIGLSPDTTTYNTLLVESCRNNNFLEAKDIFSDMLHRGVSPDLISFSSLI 332
Query: 566 QSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQ----EVK 621
AL F++MK S + + + +L+ G +N G+M++ L+ ++
Sbjct: 333 GVSSRNGHLDQALMYFRDMKTSGLV-PDNVIYTILINGYCRN---GMMSEALEIRDKMLE 388
Query: 622 EGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGK 681
+G +D V +N +++ CKK+L+ DA M G +P+ TF +++ G+ G
Sbjct: 389 QGCALD--VVAYNTILNGLCKKKLLADANALFDEMVERGVVPDFCTFTTLIHGHCK-EGN 445
Query: 682 YTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGF-----FARANEVVAMMEEGKM 736
+ L+G M T N D V Y + GF +ANE+ M K+
Sbjct: 446 MGKALSLFGIM------TQKNIKP---DIVTYNILIDGFCKTTEMEKANELWNEMISRKI 496
Query: 737 FIDKYKYRTLFLKY 750
F + Y L Y
Sbjct: 497 FPNHISYAILVNGY 510
>gi|115486223|ref|NP_001068255.1| Os11g0607100 [Oryza sativa Japonica Group]
gi|77551887|gb|ABA94684.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|113645477|dbj|BAF28618.1| Os11g0607100 [Oryza sativa Japonica Group]
Length = 671
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/235 (21%), Positives = 95/235 (40%), Gaps = 45/235 (19%)
Query: 448 QPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAAL---GHVITLCISLGWL 504
+P Y ++ + GK L++ ++ L+ + + GH G
Sbjct: 319 KPNVHTYTVMIGGYCREGKLARAEMLLVRMVEQGLKPNTNTYTTLIGGHC-----KGGSF 373
Query: 505 DQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEAL 564
D+A +L+++M G + Y +++ + + + +E +LR A S G++ D Y L
Sbjct: 374 DRAFELMNKMKQEGFLPNIYTYNAVIDGFCKKGKIQEAYKVLRMATSQGLKFDKITYTIL 433
Query: 565 LQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQ 624
+ Q AL LF M E+ GC + EA
Sbjct: 434 ITEHCKQGHITYALDLFDRMVEN---------------GCCPDIEA-------------- 464
Query: 625 RIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIG 679
+ ++I +C++R M++++K + +G LP QT+ SM+ GY +G
Sbjct: 465 --------YTSLISTYCQQRQMEESQKFFDKCLMIGLLPTKQTYTSMIAGYCKVG 511
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 53/269 (19%), Positives = 108/269 (40%), Gaps = 6/269 (2%)
Query: 484 VSHDDAALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVT 543
V D+ + ++ +C G +++ LL M G ++ ++++ E R ++V+
Sbjct: 177 VCPDERSFRALVVVCCREGKVEEVDALLAAMWRYGFSLDNATCTVVVRSLCEKGRFKDVS 236
Query: 544 ALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKG 603
R G + Y A + ++ A H+ +EM + + + L+ G
Sbjct: 237 EFFRRMLETGTPPNVVNYTAWIDGLCKRRYVKQAFHVLEEMVGRGLKPNVYTH-TTLIDG 295
Query: 604 CAQNHEAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLP 663
+ +L ++ + VH + +I +C++ + AE L RM G P
Sbjct: 296 LCKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCREGKLARAEMLLVRMVEQGLKP 355
Query: 664 NAQTFHSMVTGYAAIGGKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFAR 723
N T+ +++ G+ GG + EL +MK ++ ++D F + G
Sbjct: 356 NTNTYTTLIGGHCK-GGSFDRAFELMNKMKQEGFLPNIYTYNAVIDG----FCKKGKIQE 410
Query: 724 ANEVVAMMEEGKMFIDKYKYRTLFLKYHK 752
A +V+ M + DK Y L ++ K
Sbjct: 411 AYKVLRMATSQGLKFDKITYTILITEHCK 439
>gi|32527606|gb|AAP86200.1| pentatricopeptide repeat-containing protein [Raphanus sativus]
Length = 654
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 66/259 (25%), Positives = 109/259 (42%), Gaps = 17/259 (6%)
Query: 445 GILQPTEKIYIKLVKAFLEAGKTKELTH-FLIKAEKENLQVSHDDAALGHVITLCISLGW 503
GI+ P+ Y ++ F + + H F + A K S D +I
Sbjct: 321 GII-PSTITYSSMIDGFCKQNRLDAAEHMFYLMATK---GCSPDIITFNTLIAGYCRAKR 376
Query: 504 LDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEA 563
+D LL EM AG+ A++ Y +L+ + + LL++ S+G+ +
Sbjct: 377 VDDGIKLLHEMTEAGLVANTITYTTLIHGFCQVGDLNAAQDLLQEMVSSGVCPNVVTCNT 436
Query: 564 LLQSKIVQKDTPGALHLFKEMKESKI------PRSGH----QEFEMLVKGCAQNHEAGLM 613
LL AL +FK M++SK+ P +G Q + +L+ G N L
Sbjct: 437 LLDGLCDNGKLKDALEMFKAMQKSKMDIDASHPFNGVEPDVQTYNILISGLI-NEGKFLE 495
Query: 614 AKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVT 673
A+ L E + I +N+VIH CK+ + +A + M S PN TF +++
Sbjct: 496 AEELYEEMPHRGIVPDTITYNSVIHGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLIN 555
Query: 674 GYAAIGGKYTEVTELWGEM 692
GY G+ + EL+ EM
Sbjct: 556 GYCK-AGRVDDGLELFCEM 573
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 56/248 (22%), Positives = 101/248 (40%), Gaps = 17/248 (6%)
Query: 457 LVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQAHDLLDEMHL 516
++ F +G+ E L++ E ++S D +I + G +A +L DEM
Sbjct: 261 MINGFCSSGRWSEAQQ-LLQEMLERKKISPDVVTYNALINAFVKEGKFFEAEELYDEMLP 319
Query: 517 AGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQKDTPG 576
G+ S+ Y+S++ + + NR + + G D + L+ K
Sbjct: 320 RGIIPSTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPDIITFNTLIAGYCRAKRVDD 379
Query: 577 ALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQE-VKEGQRIDCGVHDWNN 635
+ L EM E+ + + + L+ G Q + LLQE V G + V N
Sbjct: 380 GIKLLHEMTEAGLV-ANTITYTTLIHGFCQVGDLNAAQDLLQEMVSSG--VCPNVVTCNT 436
Query: 636 VIHFFCKKRLMQDAEKALKRMRSL-----------GHLPNAQTFHSMVTGYAAIGGKYTE 684
++ C ++DA + K M+ G P+ QT++ +++G GK+ E
Sbjct: 437 LLDGLCDNGKLKDALEMFKAMQKSKMDIDASHPFNGVEPDVQTYNILISGLIN-EGKFLE 495
Query: 685 VTELWGEM 692
EL+ EM
Sbjct: 496 AEELYEEM 503
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 82/185 (44%), Gaps = 10/185 (5%)
Query: 497 LCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQL 556
LC+ + +A DL +M + + + +L+ R E ALL G+Q
Sbjct: 158 LCVE-DRISEALDLFHQM----CKPNVVTFTTLMNGLCREGRVVEAVALLDRMLEDGLQP 212
Query: 557 DASCYEALLQSKIVQKDTPGALHLFKEMKE-SKI-PRSGHQEFE---MLVKGCAQNHEAG 611
+ Y ++ DT AL+L ++M+E S I P E ++ G +
Sbjct: 213 NQITYGTIVDGMCKMGDTVSALNLLRKMEEVSHIKPNVVIWPLERRTCMINGFCSSGRWS 272
Query: 612 LMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSM 671
+LLQE+ E ++I V +N +I+ F K+ +AE+ M G +P+ T+ SM
Sbjct: 273 EAQQLLQEMLERKKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPSTITYSSM 332
Query: 672 VTGYA 676
+ G+
Sbjct: 333 IDGFC 337
>gi|334182516|ref|NP_172730.3| helicase domain and pentatricopeptide repeat-containing protein
[Arabidopsis thaliana]
gi|332190794|gb|AEE28915.1| helicase domain and pentatricopeptide repeat-containing protein
[Arabidopsis thaliana]
Length = 735
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 78/309 (25%), Positives = 122/309 (39%), Gaps = 16/309 (5%)
Query: 442 TEHGILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISL 501
E+G QP Y +V +G T L K E+ N V D +I
Sbjct: 185 VENGC-QPDVVTYNSIVNGICRSGDTSLALDLLRKMEERN--VKADVFTYSTIIDSLCRD 241
Query: 502 GWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCY 561
G +D A L EM G+++S Y SL++ +A + + LL+D S I + +
Sbjct: 242 GCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITF 301
Query: 562 EALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKG-CAQNH--EAGLMAKLLQ 618
LL + + A L+KEM I + L+ G C QN EA M L+
Sbjct: 302 NVLLDVFVKEGKLQEANELYKEMITRGIS-PNIITYNTLMDGYCMQNRLSEANNMLDLMV 360
Query: 619 EVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAI 678
K I + ++I +C + + D K + + G + NA T+ +V G+
Sbjct: 361 RNKCSPDI----VTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQ- 415
Query: 679 GGKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFI 738
GK EL+ EM S + LLD G +A E+ +++ KM +
Sbjct: 416 SGKIKLAEELFQEMVSHGVLPDVMTYGILLDG----LCDNGKLEKALEIFEDLQKSKMDL 471
Query: 739 DKYKYRTLF 747
Y T+
Sbjct: 472 GIVMYTTII 480
Score = 49.7 bits (117), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 82/188 (43%), Gaps = 7/188 (3%)
Query: 560 CYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQE 619
C+ L+S IV A+ LF+EM S+ P +F A+ + L+ ++
Sbjct: 55 CFRERLRSGIVDIKKDDAIALFQEMIRSR-PLPSLVDFSRFFSAIARTKQFNLVLDFCKQ 113
Query: 620 VKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIG 679
+ E I ++ N +I+ FC+ A L ++ LG+ P+ TF++++ G +
Sbjct: 114 L-ELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGL-FLE 171
Query: 680 GKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFID 739
GK +E L M D +S++ R G + A +++ MEE + D
Sbjct: 172 GKVSEAVVLVDRMVENGCQP----DVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKAD 227
Query: 740 KYKYRTLF 747
+ Y T+
Sbjct: 228 VFTYSTII 235
Score = 48.1 bits (113), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 39/177 (22%), Positives = 75/177 (42%), Gaps = 4/177 (2%)
Query: 504 LDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEA 563
L +A+++LD M + SL+K Y R + + R+ G+ +A Y
Sbjct: 349 LSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSI 408
Query: 564 LLQSKIVQKDTPGALHLFKEM-KESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKE 622
L+Q A LF+EM +P + +L+ G N + ++ +++++
Sbjct: 409 LVQGFCQSGKIKLAEELFQEMVSHGVLP--DVMTYGILLDGLCDNGKLEKALEIFEDLQK 466
Query: 623 GQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIG 679
++D G+ + +I CK ++DA + G PN T+ M++G G
Sbjct: 467 -SKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKG 522
Score = 46.6 bits (109), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 43/214 (20%), Positives = 95/214 (44%), Gaps = 3/214 (1%)
Query: 504 LDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEA 563
+D + + G+ A++ Y+ L++ + ++ + + L ++ S G+ D Y
Sbjct: 384 VDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGI 443
Query: 564 LLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEG 623
LL AL +F+++++SK+ G + +++G + + L +
Sbjct: 444 LLDGLCDNGKLEKALEIFEDLQKSKMDL-GIVMYTTIIEGMCKGGKVEDAWNLFCSL-PC 501
Query: 624 QRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYT 683
+ + V + +I CKK + +A L++M G+ PN T+++++ + G T
Sbjct: 502 KGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLR-DGDLT 560
Query: 684 EVTELWGEMKSFASSTSMNFDEELLDSVLYTFVR 717
+L EMKS S + + ++D +L R
Sbjct: 561 ASAKLIEEMKSCGFSADASSIKMVIDMLLSAMKR 594
>gi|359481811|ref|XP_002278330.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g41720-like [Vitis vinifera]
Length = 848
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 96/492 (19%), Positives = 205/492 (41%), Gaps = 36/492 (7%)
Query: 248 AMKPNTNTFNIALAGCLLFETTRKAEQLLDIMPRIGVKADSNLLIIMAHIYERNGRREEL 307
A+ P+ +T+N + C ++A + M GV D I+ Y+R +
Sbjct: 227 AIPPSRSTYNNLINACGSSGNWKEALNVCKKMTENGVGPDLVTHNIVLSAYKRGN---QY 283
Query: 308 RKLQRHIDEAVNLSDIQFRQFYNCLLSCHLKFGDLNSASKMVLEMLQRAKEARNSLAAAM 367
K+ + + + N ++ C +K G A +++ KE R+ +
Sbjct: 284 SKVLSYFELMKGTNIRPDTTTLNIVIYCLVKLGQNGKA----IDIFNSMKEKRSECYPDV 339
Query: 368 LPFNAVGVNNRTPSEQNVNCTNSVDLENSGIIENHILSYEDFTKDRKFVALEAEVKRVLQ 427
+ F + ++ + Q NC + + + ++ +I+SY ++ E V
Sbjct: 340 VTFTTI-IHLYSVCGQIENCQTAFNTMLAEGLKPNIVSYNALIGAYASHGMDKEAFSVFN 398
Query: 428 TLLGMLQKQVELITTEHGILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHD 487
+ ++G P Y L+ A+ ++GK ++ E ++ +H
Sbjct: 399 EI------------KKNG-FHPDVVSYTSLLNAYGKSGKPEKAMKVF-----ELMRRNHC 440
Query: 488 DAAL---GHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTA 544
L +I S G L +A ++L EM GV+ + +LL A + ++ +
Sbjct: 441 KPNLVSYNALIDAYGSKGLLTEAVEILHEMERNGVQPNIVSICTLLAACGRCGQKVKIKS 500
Query: 545 LLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGC 604
+L A GI+L+ + Y + + S + + AL L++ M+ K+ + + +L+ GC
Sbjct: 501 VLSAAELRGIKLNTTAYNSAIGSYLSVGEYDKALSLYRAMRTKKV-KPDPVTYNVLISGC 559
Query: 605 AQNHEAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPN 664
+ + G L E+ + +I +++VI + K+ + +AE +M+ +G P+
Sbjct: 560 CKMSKYGEALGFLDEMMD-LKIPLSKEVYSSVICAYSKQGQVTEAESMFTKMKMVGCRPD 618
Query: 665 AQTFHSMVTGYAAIGGKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARA 724
T+ +M+ Y + + + + L+ EM+ + + D S++ F +GG A+
Sbjct: 619 VITYTAMIHAY-DVAENWEKASALFLEME----TDDVQPDSIACSSLMRAFNKGGQPAKV 673
Query: 725 NEVVAMMEEGKM 736
+ M E K+
Sbjct: 674 LVLAEFMREKKI 685
Score = 42.0 bits (97), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 35/175 (20%), Positives = 76/175 (43%), Gaps = 4/175 (2%)
Query: 507 AHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQ 566
A +++D+M A + S S Y +L+ A + +E + + G+ D + +L
Sbjct: 216 AMNIMDDMLRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTENGVGPDLVTHNIVLS 275
Query: 567 SKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRI 626
+ L F+ MK + I R +++ + + G + +KE +R
Sbjct: 276 AYKRGNQYSKVLSYFELMKGTNI-RPDTTTLNIVIYCLVKLGQNGKAIDIFNSMKE-KRS 333
Query: 627 DC--GVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIG 679
+C V + +IH + +++ + A M + G PN ++++++ YA+ G
Sbjct: 334 ECYPDVVTFTTIIHLYSVCGQIENCQTAFNTMLAEGLKPNIVSYNALIGAYASHG 388
>gi|224113637|ref|XP_002316529.1| predicted protein [Populus trichocarpa]
gi|222859594|gb|EEE97141.1| predicted protein [Populus trichocarpa]
Length = 678
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/267 (21%), Positives = 113/267 (42%), Gaps = 8/267 (2%)
Query: 501 LGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASC 560
+G + A +L +EM + + YA++++ Y A E L + G+ ++
Sbjct: 324 IGGITVAEELRNEMMKIDIEPNVRTYATMIEGYSRAGCLEEALRLCDEMVERGLLPNSVV 383
Query: 561 YEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEV 620
Y +++ ++ D GA +F +M + +IP +L +G +N K L +V
Sbjct: 384 YNSIMHWLYMEGDVDGASLVFTDMSDKQIPLDKFT-CSILTRGLCRNGYITTALKFLNQV 442
Query: 621 KEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGG 680
E I+ N +I+F CK A + L RM G +P+ TF +++ G+ G
Sbjct: 443 LENNLIE-DAFSHNILINFLCKSNNFAAARQLLARMYVRGLVPDVVTFGTLIDGHCKEGN 501
Query: 681 KYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFIDK 740
+ V +++ +M ++ + +S++ + G A +V +++ + +D
Sbjct: 502 IESAV-QVYDKMVKGEEKPNL----LVYNSIINGLCKDGLVDVARSLVDVLQRMGL-VDT 555
Query: 741 YKYRTLFLKYHKTLYKGKTPKFQTEAQ 767
Y TL Y K K T Q
Sbjct: 556 ITYNTLINGYFNCGKFDKAFKLSTLMQ 582
Score = 46.2 bits (108), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 40/194 (20%), Positives = 82/194 (42%), Gaps = 5/194 (2%)
Query: 489 AALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRD 548
A ++ C +G A +++ ++ + G + + + L I+ N + ++
Sbjct: 169 AVFDALVRACTQIGATVGACEVIKKLQIEGCWVTIHAWNNFLSHLIKVNEIHRFWIVYKE 228
Query: 549 ARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKI-PRSGHQEFEMLVKGCAQN 607
S G + + + ++ + AL +F + +S I P F M+V G +
Sbjct: 229 MVSYGYMENVNTFNVVVHALCKDCKLQEALSVFYRILKSGIWPNV--VTFNMMVDGACKM 286
Query: 608 HEAGLMAKLLQ--EVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNA 665
+ L KL++ E+ I +N++I FCK + AE+ M + PN
Sbjct: 287 GDMDLALKLVRKMEIMSAGSIKPNSVTYNSLIDGFCKIGGITVAEELRNEMMKIDIEPNV 346
Query: 666 QTFHSMVTGYAAIG 679
+T+ +M+ GY+ G
Sbjct: 347 RTYATMIEGYSRAG 360
>gi|255565812|ref|XP_002523895.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223536825|gb|EEF38464.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 784
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 63/297 (21%), Positives = 124/297 (41%), Gaps = 19/297 (6%)
Query: 456 KLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQAHDLLDEMH 515
KL +A GK K+ + F D+ + ++ + G L++A DLL +M
Sbjct: 227 KLSEAIGLIGKMKDFSCF------------PDNVSYNTILDVLCKKGKLNEARDLLLDMK 274
Query: 516 LAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQKDTP 575
G+ + + + L+ Y + +E ++ + D Y L+
Sbjct: 275 NNGLLPNRNTFNILVSGYCKLGWLKEAAQVIDLMAQNNVLPDVWTYNMLIGGLCKDGKID 334
Query: 576 GALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRIDCGVHDWNN 635
A L EM+ K+ + L+ GC + + L L + EG+ + +N
Sbjct: 335 EAFRLKDEMENLKL-LPDVVTYNTLINGCF-DCSSSLKGFELIDKMEGKGVKPNAVTYNV 392
Query: 636 VIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEMKSF 695
V+ ++ K+ M +A L++M G P+ TF++++ GY G+ +E + EM
Sbjct: 393 VVKWYVKEGKMDNAGNELRKMEESGFSPDCVTFNTLINGYCK-AGRLSEAFRMMDEM--- 448
Query: 696 ASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFIDKYKYRTLFLKYHK 752
S + + L+++L+T A ++++ + F+D+ Y TL + Y K
Sbjct: 449 -SRKGLKMNSVTLNTILHTLCGERKLDDAYKLLSSASKRGYFVDEVSYGTLIMGYFK 504
Score = 62.4 bits (150), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 112/509 (22%), Positives = 195/509 (38%), Gaps = 48/509 (9%)
Query: 247 IAMKPNTNTFNIALAGCLLFETTRKAEQLLDIMPRIGVKADSNLLIIMAHIYERNGRREE 306
+ +K NTNTFNI + GC + +A L+ M D+ + + + G+ E
Sbjct: 206 LGVKVNTNTFNILIYGCCIENKLSEAIGLIGKMKDFSCFPDNVSYNTILDVLCKKGKLNE 265
Query: 307 LRKLQRHIDEAVNLSDIQFRQFYNCLLSCHLKFGDLNSASKMVLEMLQRAKEARNSLAAA 366
R L + + N + R +N L+S + K G L A++++ M Q
Sbjct: 266 ARDL---LLDMKNNGLLPNRNTFNILVSGYCKLGWLKEAAQVIDLMAQ------------ 310
Query: 367 MLPFNAVGVNNRTPSEQNVNCTNSVDLENSGIIENHILSYEDFTKDRKFVALEAEVKRVL 426
NN P N ++ I E L +D ++ K + ++
Sbjct: 311 ---------NNVLPDVWTYNMLIGGLCKDGKIDEAFRL--KDEMENLKLLPDVVTYNTLI 359
Query: 427 QTLLGMLQ--KQVELITTEHGI-LQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQ 483
K ELI G ++P Y +VK +++ GK + L K E+
Sbjct: 360 NGCFDCSSSLKGFELIDKMEGKGVKPNAVTYNVVVKWYVKEGKMDNAGNELRKMEESGF- 418
Query: 484 VSHDDAALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVT 543
S D +I G L +A ++DEM G++ +S ++L + +
Sbjct: 419 -SPDCVTFNTLINGYCKAGRLSEAFRMMDEMSRKGLKMNSVTLNTILHTLCGERKLDDAY 477
Query: 544 ALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKG 603
LL A G +D Y L+ + A+ L+ EMKE +I S M+
Sbjct: 478 KLLSSASKRGYFVDEVSYGTLIMGYFKDGKSVEAMKLWDEMKEKEIIPSIITYNTMIGGL 537
Query: 604 CAQNHEAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLP 663
C + KL + ++ G D +N +I +C++ ++ A + +M P
Sbjct: 538 CHSGKTDQSIDKLNELLESGLVPD--ETTYNTIILGYCREGQVEKAFQFHNKMVKKSFKP 595
Query: 664 NAQTFHSMVTGYAAIGGKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGF--- 720
+ T + ++ G G L +K F + S + +D+V Y + G
Sbjct: 596 DLFTCNILLRGLCTEG-------MLDKALKLFNTWISKG---KAIDAVTYNTIISGLCKE 645
Query: 721 --FARANEVVAMMEEGKMFIDKYKYRTLF 747
F A +++A MEE K+ D Y Y +
Sbjct: 646 DRFEEAFDLLAEMEEKKLGPDCYTYNAIL 674
Score = 48.5 bits (114), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 35/164 (21%), Positives = 75/164 (45%), Gaps = 5/164 (3%)
Query: 519 VRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQKDTPGAL 578
V++ + + + AY+ NRP + + ++ + L+ + +V+ + ++
Sbjct: 135 VQSLRVILDTSIGAYVACNRPHHAAQIFNRMKRLHLKPNLLTCNTLINA-LVRYPSKPSV 193
Query: 579 HLFKEMKESKIP---RSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRIDCGVHDWNN 635
+L K + I + F +L+ GC ++ L+ ++K+ V +N
Sbjct: 194 YLSKAIFSDVIKLGVKVNTNTFNILIYGCCIENKLSEAIGLIGKMKDFSCFPDNVS-YNT 252
Query: 636 VIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIG 679
++ CKK + +A L M++ G LPN TF+ +V+GY +G
Sbjct: 253 ILDVLCKKGKLNEARDLLLDMKNNGLLPNRNTFNILVSGYCKLG 296
Score = 45.1 bits (105), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 65/132 (49%), Gaps = 5/132 (3%)
Query: 227 IGYLFQDGRVDP--RKKCNAPLIAMKPNTNTFNIALAGCLLFETTRKAEQLLDIMPRIGV 284
IG L +DG++D R K + + P+ T+N + GC ++ K +L+D M GV
Sbjct: 324 IGGLCKDGKIDEAFRLKDEMENLKLLPDVVTYNTLINGCFDCSSSLKGFELIDKMEGKGV 383
Query: 285 KADSNLLIIMAHIYERNGRREELRKLQRHIDEAVNLSDIQFRQFYNCLLSCHLKFGDLNS 344
K ++ ++ Y + G+ + R ++E+ D +N L++ + K G L+
Sbjct: 384 KPNAVTYNVVVKWYVKEGKMDNAGNELRKMEESGFSPDC---VTFNTLINGYCKAGRLSE 440
Query: 345 ASKMVLEMLQRA 356
A +M+ EM ++
Sbjct: 441 AFRMMDEMSRKG 452
>gi|224068454|ref|XP_002326124.1| predicted protein [Populus trichocarpa]
gi|222833317|gb|EEE71794.1| predicted protein [Populus trichocarpa]
Length = 512
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 98/231 (42%), Gaps = 18/231 (7%)
Query: 487 DDAALGHVITLCISLGWLDQAHD------LLDEMHLAGVRASSSVYASLLKAYIEANRPR 540
D LG ++T W+ QA D LL E+ VR +S VY +LL ++ N+
Sbjct: 107 DSKLLGFLVT------WMAQASDFDMVKKLLAEVQGKEVRINSFVYNNLLSVLVKQNQVH 160
Query: 541 EVTALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEML 600
E L ++ D + L++ A +FK+M ES + L
Sbjct: 161 EAIYLFKEYLVMQSPPDTWTFNILIRGLCRVGGVDRAFEVFKDM-ESFGCLPDVVTYNTL 219
Query: 601 VKGCAQNHEAGLMAKLLQEVKEGQRIDCG--VHDWNNVIHFFCKKRLMQDAEKALKRMRS 658
+ G + +E +L +E++ R DC + + ++I FCK M++A + M
Sbjct: 220 INGLCKANEVQRGCELFKEIQ--SRSDCSPDIVTYTSIISGFCKSGKMKEASNLFEEMMR 277
Query: 659 LGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEMKSFASSTSMNFDEELLD 709
G PN TF+ ++ G+ I G E ++ +M F S + L+D
Sbjct: 278 SGIQPNVITFNVLIDGFGKI-GNIAEAEAMYRKMAYFDCSADVVTFTSLID 327
>gi|356564530|ref|XP_003550506.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g11690-like [Glycine max]
Length = 556
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/275 (22%), Positives = 117/275 (42%), Gaps = 7/275 (2%)
Query: 473 FLIKAEKENLQVSHDDAALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKA 532
F + A E +S + +I C G + A +L +M G+ + Y+ L+
Sbjct: 178 FRLLAVLEEFGLSPNVVIYTTLIDGCCKNGDVMLAKNLFCKMDRLGLVPNQHTYSVLMNG 237
Query: 533 YIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRS 592
+ + RE + + +GI +A Y L+ A +F EM+E I
Sbjct: 238 FFKQGLQREGFQMYENMNRSGIVPNAYAYNCLISEYCNDGMVDKAFKVFAEMREKGIA-C 296
Query: 593 GHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKA 652
G + +L+ G + + G KL+ +V + + + +N +I+ FC M A +
Sbjct: 297 GVMTYNILIGGLCRGKKFGEAVKLVHKVNK-VGLSPNIVTYNILINGFCDVGKMDTAVRL 355
Query: 653 LKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEMKSFASSTSMNFDEELLDSVL 712
+++S G P T+++++ GY+ + +L EM+ + S L+D+
Sbjct: 356 FNQLKSSGLSPTLVTYNTLIAGYSKV-ENLAGALDLVKEMEERCIARSKVTYTILIDA-- 412
Query: 713 YTFVRGGFFARANEVVAMMEEGKMFIDKYKYRTLF 747
F R + +A E+ ++ME+ + D Y Y L
Sbjct: 413 --FARLNYTDKACEMHSLMEKSGLVPDVYTYSVLI 445
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 82/180 (45%), Gaps = 8/180 (4%)
Query: 506 QAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALL 565
+A L+ +++ G+ + Y L+ + + + L +S+G+ Y L+
Sbjct: 316 EAVKLVHKVNKVGLSPNIVTYNILINGFCDVGKMDTAVRLFNQLKSSGLSPTLVTYNTLI 375
Query: 566 QSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQ---NHEAGLMAKLLQEVKE 622
++ GAL L KEM+E I RS + +L+ A+ +A M L++ K
Sbjct: 376 AGYSKVENLAGALDLVKEMEERCIARS-KVTYTILIDAFARLNYTDKACEMHSLME--KS 432
Query: 623 GQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKY 682
G D V+ ++ +IH C M++A K K + + PN+ +++M+ GY G Y
Sbjct: 433 GLVPD--VYTYSVLIHGXCVNGNMKEASKPFKSLGEMHLQPNSVIYNTMIHGYCKEGSSY 490
Score = 53.5 bits (127), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 57/280 (20%), Positives = 112/280 (40%), Gaps = 17/280 (6%)
Query: 490 ALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDA 549
+ G +IT C G+ + LL + G+ + +Y +L+ + L
Sbjct: 160 SFGIMITGCCEAGYFVRVFRLLAVLEEFGLSPNVVIYTTLIDGCCKNGDVMLAKNLFCKM 219
Query: 550 RSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHE 609
G+ + Y L+ Q +++ M S I + + + L+ +
Sbjct: 220 DRLGLVPNQHTYSVLMNGFFKQGLQREGFQMYENMNRSGIVPNAY-AYNCLISEYCNDGM 278
Query: 610 AGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFH 669
K+ E++E + I CGV +N +I C+ + +A K + ++ +G PN T++
Sbjct: 279 VDKAFKVFAEMRE-KGIACGVMTYNILIGGLCRGKKFGEAVKLVHKVNKVGLSPNIVTYN 337
Query: 670 SMVTGYAAIGGKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGF-----FARA 724
++ G+ +G T V L+ ++KS S ++ V Y + G+ A A
Sbjct: 338 ILINGFCDVGKMDTAV-RLFNQLKSSGLSPTL---------VTYNTLIAGYSKVENLAGA 387
Query: 725 NEVVAMMEEGKMFIDKYKYRTLFLKYHKTLYKGKTPKFQT 764
++V MEE + K Y L + + Y K + +
Sbjct: 388 LDLVKEMEERCIARSKVTYTILIDAFARLNYTDKACEMHS 427
>gi|83744086|gb|ABC42329.1| PPR protein [Oryza sativa Indica Group]
Length = 761
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 65/273 (23%), Positives = 118/273 (43%), Gaps = 17/273 (6%)
Query: 433 LQKQVELITT--EHGILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAA 490
+ K +E++T+ ++G++ P + Y ++ + +G+ KE FL K + ++ D
Sbjct: 247 MDKAMEVLTSMVKNGVM-PNCRTYTSIMHGYCSSGQPKEAIGFLKKVRSDGVE---PDGL 302
Query: 491 LGHVITLCISL------GWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTA 544
+ T C L G L H LLD M G+ VY L+ AY + + E
Sbjct: 303 EPDIATYCTLLQGYATKGALVGMHALLDLMVRNGIHPDHYVYNILICAYAKQGKVDEAML 362
Query: 545 LLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKG- 603
+ R G+ DA Y A++ A+ F++M + + G+ + L+ G
Sbjct: 363 VFSKMRQQGLNPDAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLS-PGNIVYNSLIHGL 421
Query: 604 CAQNHEAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLP 663
C N +L+ + G I +N++I CK+ + ++EK M +G P
Sbjct: 422 CTCNKWERAEELILEMLDRG--ICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKP 479
Query: 664 NAQTFHSMVTGYAAIGGKYTEVTELWGEMKSFA 696
+ T+ +++ GY + GK E +L M S
Sbjct: 480 DIITYSTLIDGY-CLAGKMDEAMKLLSGMVSVG 511
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/179 (24%), Positives = 79/179 (44%), Gaps = 4/179 (2%)
Query: 502 GWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCY 561
G + ++ L D M GV+ Y++L+ Y A + E LL S G++ + Y
Sbjct: 460 GRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEAMKLLSGMVSVGLKPNTVTY 519
Query: 562 EALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVK 621
L+ AL LFKEM+ S + + ++++G Q +L +
Sbjct: 520 RTLINGYCKISRMGDALVLFKEMESSGVSPD-IITYNIILQGLFQTRRTAAAKELYVRIT 578
Query: 622 E-GQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIG 679
E G +I+ + +N ++H CK +L DA + + + + A+TF+ M+ +G
Sbjct: 579 ESGTQIE--LSTYNIILHGLCKNKLTDDALRMFQNLCLMDLKLEARTFNIMIDALLKVG 635
Score = 53.9 bits (128), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 55/267 (20%), Positives = 106/267 (39%), Gaps = 10/267 (3%)
Query: 449 PTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQAH 508
P Y ++ F + G + + + E + ++S D +I +D+A
Sbjct: 194 PDVVSYTTVINGFFKEGDSGK--AYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAM 251
Query: 509 DLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDA-----SCYEA 563
++L M GV + Y S++ Y + +P+E L+ RS G++ D + Y
Sbjct: 252 EVLTSMVKNGVMPNCRTYTSIMHGYCSSGQPKEAIGFLKKVRSDGVEPDGLEPDIATYCT 311
Query: 564 LLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEG 623
LLQ + G L M + I H + +L+ A+ + + ++++
Sbjct: 312 LLQGYATKGALVGMHALLDLMVRNGI-HPDHYVYNILICAYAKQGKVDEAMLVFSKMRQ- 369
Query: 624 QRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYT 683
Q ++ + VI CK ++DA ++M G P ++S++ G K+
Sbjct: 370 QGLNPDAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTC-NKWE 428
Query: 684 EVTELWGEMKSFASSTSMNFDEELLDS 710
EL EM + F ++DS
Sbjct: 429 RAEELILEMLDRGICLNTIFFNSIIDS 455
>gi|413948659|gb|AFW81308.1| hypothetical protein ZEAMMB73_549819 [Zea mays]
Length = 795
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/252 (24%), Positives = 111/252 (44%), Gaps = 9/252 (3%)
Query: 500 SLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDAS 559
SLG L++A LL +M +G++ Y+ L++ Y + R E ++ G + +++
Sbjct: 282 SLGQLEEAVRLLKKMSGSGLQPDVVTYSLLIQYYCKIGRCAEARSVFDSMVRKGQKPNST 341
Query: 560 CYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQE 619
Y LL + L M IP H+ F +L+ A++ E
Sbjct: 342 IYHILLHGYATKGALIDVRDLLDLMIRDGIPFE-HRAFNILICAYAKHGAVDKAMTAFTE 400
Query: 620 VKE-GQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAI 678
+++ G R D V ++ VIH CK ++DA +M S G PN +F S++ G +I
Sbjct: 401 MRQNGLRPD--VVSYSTVIHILCKTGRVEDAVYHFNQMVSEGLSPNIISFTSLIHGLCSI 458
Query: 679 GGKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFI 738
G++ +V EL EM + ++ D +++++ + G A + M+ +
Sbjct: 459 -GEWKKVEELAFEM----INRGIHPDAIFMNTIMDNLCKEGRVVEAQDFFDMVIHIGVKP 513
Query: 739 DKYKYRTLFLKY 750
D Y TL Y
Sbjct: 514 DVVSYNTLIDGY 525
Score = 53.1 bits (126), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 82/198 (41%), Gaps = 12/198 (6%)
Query: 489 AALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPRE-VTALLR 547
A +G +I ++G LD A G R + L+K + NR + + + R
Sbjct: 92 AIIGILIRCFCTVGRLDLAFAAFALFLKTGWRVQNVTLNQLIKGLCDGNRTDDAMDMVFR 151
Query: 548 DARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQ------EFEMLV 601
G D Y AL++ V+K + AL L M G+ + ++
Sbjct: 152 RMPELGYTPDVFSYNALIKGLCVEKKSQEALELLIHMTAD----GGYNCSPNVVSYNTVI 207
Query: 602 KGCAQNHEAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGH 661
G + E L E+ GQ + V +N++I CK + M A L+ M G
Sbjct: 208 DGFFKEGEVDKAYFLFHEMM-GQGLPPDVVTYNSLIDGLCKAQAMDKAVAILQHMFDKGV 266
Query: 662 LPNAQTFHSMVTGYAAIG 679
+P+ +T++ M+ GY ++G
Sbjct: 267 MPDTRTYNIMIRGYCSLG 284
Score = 48.9 bits (115), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 69/303 (22%), Positives = 120/303 (39%), Gaps = 49/303 (16%)
Query: 430 LGMLQKQVELITTEHGI-LQPTEKIYIKLVKAFLEAGKTKE----LTHFLIKAEKENLQV 484
LG L++ V L+ G LQP Y L++ + + G+ E + K +K N +
Sbjct: 283 LGQLEEAVRLLKKMSGSGLQPDVVTYSLLIQYYCKIGRCAEARSVFDSMVRKGQKPNSTI 342
Query: 485 SHDDAALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTA 544
H L H + G L DLLD M G+ + L+ AY + +
Sbjct: 343 YH---ILLHGYA---TKGALIDVRDLLDLMIRDGIPFEHRAFNILICAYAKHGAVDKAMT 396
Query: 545 LLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEM-KESKIP------------- 590
+ R G++ D Y ++ A++ F +M E P
Sbjct: 397 AFTEMRQNGLRPDVVSYSTVIHILCKTGRVEDAVYHFNQMVSEGLSPNIISFTSLIHGLC 456
Query: 591 ------RSGHQEFEMLVKGCAQNHEAGLMAKLLQEV-KEGQRI------DCGVH------ 631
+ FEM+ +G + +A M ++ + KEG+ + D +H
Sbjct: 457 SIGEWKKVEELAFEMINRGI--HPDAIFMNTIMDNLCKEGRVVEAQDFFDMVIHIGVKPD 514
Query: 632 --DWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELW 689
+N +I +C M ++ K L RM S+G P++ T++S++ GY G+ + L+
Sbjct: 515 VVSYNTLIDGYCFVGKMDESIKQLDRMVSIGLRPDSWTYNSLLNGYFK-NGRVEDALALY 573
Query: 690 GEM 692
EM
Sbjct: 574 REM 576
>gi|413922209|gb|AFW62141.1| hypothetical protein ZEAMMB73_911481 [Zea mays]
Length = 700
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/234 (22%), Positives = 108/234 (46%), Gaps = 6/234 (2%)
Query: 447 LQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQ 506
++P Y L+ + + +++ EK + S + +I + G L++
Sbjct: 400 IRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSGVDPSVE--TFNTLIDAYGTAGQLEK 457
Query: 507 AHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQ 566
+L +M G+++ + S++KA+ + + E A+L D + +A Y +++
Sbjct: 458 CFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIID 517
Query: 567 SKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVK-EGQR 625
+ I DT AL L ++MK S + S + +L+KG ++ + +L+ ++ +G R
Sbjct: 518 AYIESGDTEQALLLVEKMKNSGVSAS-IVTYNLLLKGLCRSSQIDEAEELIYTLRNQGLR 576
Query: 626 IDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIG 679
D V +N +I C K A + L+ M G P +T H++V+ A+ G
Sbjct: 577 PD--VVSYNTIISACCNKGDTDKALELLQEMNKYGIRPTLRTCHTLVSALASAG 628
Score = 43.1 bits (100), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 58/262 (22%), Positives = 102/262 (38%), Gaps = 14/262 (5%)
Query: 502 GWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCY 561
G + +A + + + G+ ++ +Y +L+ Y + R + +S I+ D Y
Sbjct: 348 GKVAKAKQVFEMLVHTGLVPTTVIYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITY 407
Query: 562 EALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVK 621
AL+ + A L EM++S + S + F L+ AG + K +
Sbjct: 408 NALINGLCKLEMVTKAEDLVMEMEKSGVDPS-VETFNTLIDAYGT---AGQLEKCFTVLS 463
Query: 622 EGQR--IDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIG 679
+ Q+ I V + +V+ FCK + +A L M PNAQ ++S++ Y
Sbjct: 464 DMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIE-S 522
Query: 680 GKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFID 739
G + L +MK+ S S+ LL R A E++ + + D
Sbjct: 523 GDTEQALLLVEKMKNSGVSASIVTYNLLLKG----LCRSSQIDEAEELIYTLRNQGLRPD 578
Query: 740 KYKYRTLFLKYHKTLYKGKTPK 761
Y T+ KG T K
Sbjct: 579 VVSYNTII---SACCNKGDTDK 597
Score = 41.2 bits (95), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 105/531 (19%), Positives = 200/531 (37%), Gaps = 94/531 (17%)
Query: 108 DAWKLYEQHMQMDGFPRKTLVNKILTSFVESLDSKWLEKAYGLVEQAFEEGKQILLEKEP 167
DA K++++ + M P + N ++ V+ D LE + L +Q +G +
Sbjct: 212 DALKVFDEMVDMGVAPNRITYNTMIDGHVKGGD---LEAGFRLRDQMLHDGPK----PNV 264
Query: 168 LIYLSL--GLSKCGLPVPASTILRKLVATEQYPPVTAWSAILAHMSLTAP---------- 215
+ Y L GL + G ++ ++ + P +S + ++ T
Sbjct: 265 VTYNVLLSGLCRTGRMDETRALMDEMASHSMLPDGFTYSILFDGLTRTGESQTMLSLFAE 324
Query: 216 --------GAYLAAELILEIGYLFQDGRVDPRKKCNAPLI--AMKPNTNTFNIALAGCLL 265
GAY + L+ L +DG+V K+ L+ + P T +N + G
Sbjct: 325 SLKKGVMLGAYTCSILL---NGLCKDGKVAKAKQVFEMLVHTGLVPTTVIYNTLINGYCQ 381
Query: 266 FETTRKAEQLLDIMPRIGVKADS---NLLIIMAHIYERNGRREEL--RKLQRHIDEAVNL 320
R A + + M ++ D N LI E + E+L + +D +V
Sbjct: 382 VRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSGVDPSV-- 439
Query: 321 SDIQFRQFYNCLLSCHLKFGDLNSASKMVLEMLQRAKEARNSLAAAMLPFNAVGVNNRTP 380
+ +N L+ + G L ++ +M Q+ + + ++ F +V
Sbjct: 440 ------ETFNTLIDAYGTAGQLEKCFTVLSDMQQKG------IKSDVISFGSV------- 480
Query: 381 SEQNVNCTNSVDLENSGIIENHILSYEDFTKDRKFVALEAEVKRVLQTLLGMLQKQVELI 440
C N E I+++ I Y+D VA A+V ++ +E
Sbjct: 481 --VKAFCKNGKIPEAVAILDDMI--YKD-------VAPNAQVYN------SIIDAYIESG 523
Query: 441 TTEHGILQPTEKI-----------YIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDA 489
TE +L EK+ Y L+K + + E + + L+ D
Sbjct: 524 DTEQALLL-VEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGLR--PDVV 580
Query: 490 ALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDA 549
+ +I+ C + G D+A +LL EM+ G+R + +L+ A A R ++ L +
Sbjct: 581 SYNTIISACCNKGDTDKALELLQEMNKYGIRPTLRTCHTLVSALASAGRVHDMECLYQQM 640
Query: 550 RSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIP-----RSGHQ 595
++ +S Y ++ + + ++ L KEM E I RS H+
Sbjct: 641 LHKNVEPSSSIYGIMVDAYVRCENDSKVASLKKEMSEKGIAFDDTKRSNHE 691
>gi|297849642|ref|XP_002892702.1| hypothetical protein ARALYDRAFT_471420 [Arabidopsis lyrata subsp.
lyrata]
gi|297338544|gb|EFH68961.1| hypothetical protein ARALYDRAFT_471420 [Arabidopsis lyrata subsp.
lyrata]
Length = 667
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 73/308 (23%), Positives = 125/308 (40%), Gaps = 14/308 (4%)
Query: 442 TEHGILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISL 501
E+G QP Y +V ++G T L K ++ N V D +I
Sbjct: 162 VENGC-QPNVVTYNSIVNGICKSGDTSLALDLLRKMDERN--VKADVFTYSTIIDSLCRD 218
Query: 502 GWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCY 561
G +D A L EM G+++S Y SL+ +A + + LL+D S I + +
Sbjct: 219 GCIDAAISLFKEMETKGIKSSLVTYNSLVGGLCKAGKWNDGVQLLKDMTSRKIIPNVITF 278
Query: 562 EALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNH--EAGLMAKLLQE 619
L+ + + A L+KEM I + ++ C QN EA M L+
Sbjct: 279 NVLIDVFVKEGKLQEANELYKEMITKGISPNTITYNSLMDGYCMQNRLSEANNMLDLM-- 336
Query: 620 VKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIG 679
V+ D + + ++I +CK + + + K +++ G + N T+ +V G+
Sbjct: 337 VRNNCSPD--IVTFTSLIKGYCKVKRVDEGMKLFRKISKRGLVANTVTYSILVQGFCQ-S 393
Query: 680 GKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFID 739
GK EL+ EM S + LLD + G +A E+ +++ KM +D
Sbjct: 394 GKLEIAEELFQEMVSLGVLPDVMTYGILLDGL----CDNGKLEKALEIFEDLQKSKMNLD 449
Query: 740 KYKYRTLF 747
Y +
Sbjct: 450 IVMYTIII 457
Score = 49.3 bits (116), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 45/196 (22%), Positives = 85/196 (43%), Gaps = 7/196 (3%)
Query: 552 AGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAG 611
+GI CY L+S IV A+ LF+EM S+ P +F G A +
Sbjct: 24 SGISDGRVCYGERLRSGIVDIKEDDAIDLFQEMIRSR-PLPSLVDFSRFFSGVASTKQFN 82
Query: 612 LMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSM 671
L+ +++ E I ++ N +I+ FC+ A L ++ LG+ P+ TF+++
Sbjct: 83 LVLDFCKKM-ELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTL 141
Query: 672 VTGYAAIGGKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMM 731
+ G + K +E L M ++ +S++ + G + A +++ M
Sbjct: 142 INGL-CLESKVSEAVVLVARMVENGCQPNV----VTYNSIVNGICKSGDTSLALDLLRKM 196
Query: 732 EEGKMFIDKYKYRTLF 747
+E + D + Y T+
Sbjct: 197 DERNVKADVFTYSTII 212
Score = 47.8 bits (112), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 58/281 (20%), Positives = 121/281 (43%), Gaps = 11/281 (3%)
Query: 438 ELITTEHGILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITL 497
E+IT GI P Y L+ + + E + L + N S D +I
Sbjct: 300 EMIT--KGI-SPNTITYNSLMDGYCMQNRLSEANNMLDLMVRNN--CSPDIVTFTSLIKG 354
Query: 498 CISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLD 557
+ +D+ L ++ G+ A++ Y+ L++ + ++ + L ++ S G+ D
Sbjct: 355 YCKVKRVDEGMKLFRKISKRGLVANTVTYSILVQGFCQSGKLEIAEELFQEMVSLGVLPD 414
Query: 558 ASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLL 617
Y LL AL +F+++++SK+ + ++++G + + L
Sbjct: 415 VMTYGILLDGLCDNGKLEKALEIFEDLQKSKMNLDIVM-YTIIIEGMCKGGKVEDAWNLF 473
Query: 618 QEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAA 677
+ + + V + +I CKK + +A L++M G+ PN T+++++ +
Sbjct: 474 CSLP-CKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNEPNDCTYNTLIRAHLR 532
Query: 678 IGGKYTEVTELWGEMKSF---ASSTSMNFDEELLDSVLYTF 715
G T +L EMKS A ++S+ ++L S ++ F
Sbjct: 533 -DGDLTASAKLIEEMKSCGFSADASSIKMVIDMLSSAVWWF 572
>gi|296089773|emb|CBI39592.3| unnamed protein product [Vitis vinifera]
Length = 577
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 63/272 (23%), Positives = 119/272 (43%), Gaps = 18/272 (6%)
Query: 494 VITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAG 553
VI +G +A D++++M G S Y +++ Y +A + + ALL++ +
Sbjct: 235 VINGLCKVGKFQKAGDVVEDMKAWGFSPSVITYNTIIDGYCKAGKMFKADALLKEMVAKR 294
Query: 554 IQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQ----EFEMLVKGCAQNHE 609
I + + L+ ++ A +F+EM+ R G Q + L+ G N +
Sbjct: 295 IHPNEITFNILIDGFCRDENVTAAKKVFEEMQ-----RQGLQPNVVTYNSLINGLCSNGK 349
Query: 610 AGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFH 669
A LQ+ G + V +N +I+ FCKK+++++A + L + G PN TF+
Sbjct: 350 LD-EALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEAREMLDDIGKRGLAPNVITFN 408
Query: 670 SMVTGYAAIGGKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVA 729
+++ Y GK + + + ++S T + + + ++ F R G A ++
Sbjct: 409 TLIDAY----GKAGRMDDAF-LLRSMMLDTGVCPNVSTYNCLIVGFCREGNVKEARKLAK 463
Query: 730 MMEEGKMFIDKYKYRTLFLKYHKTLYKGKTPK 761
ME + D Y L K KG+T K
Sbjct: 464 EMEGNGLKADLVTYNILVDALCK---KGETRK 492
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 50/226 (22%), Positives = 97/226 (42%), Gaps = 9/226 (3%)
Query: 447 LQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQ 506
LQP Y L+ GK E ++ + + + + +I L +
Sbjct: 330 LQPNVVTYNSLINGLCSNGKLDE--ALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKE 387
Query: 507 AHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQ 566
A ++LD++ G+ + + +L+ AY +A R + L G+ + S Y L+
Sbjct: 388 AREMLDDIGKRGLAPNVITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLIV 447
Query: 567 SKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEV----KE 622
+ + A L KEM+ + + ++ + +LV + E +LL E+ K+
Sbjct: 448 GFCREGNVKEARKLAKEMEGNGL-KADLVTYNILVDALCKKGETRKAVRLLDEMTLMEKK 506
Query: 623 GQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTF 668
G+R + + +N +I FC K +++A + L M G +PN T+
Sbjct: 507 GRRAN--IVTYNVLIKGFCNKGKLEEANRLLNEMLEKGLIPNRTTY 550
>gi|242050480|ref|XP_002462984.1| hypothetical protein SORBIDRAFT_02g035800 [Sorghum bicolor]
gi|241926361|gb|EER99505.1| hypothetical protein SORBIDRAFT_02g035800 [Sorghum bicolor]
Length = 668
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/250 (22%), Positives = 109/250 (43%), Gaps = 5/250 (2%)
Query: 445 GILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWL 504
G ++P + Y L+K ++ G K L E V+ D+A ++ G
Sbjct: 293 GEIKPRTRAYNALLKGYVRIGSLKNAEQVL--DEMSQCGVAPDEATYSLLVDAYTRAGRW 350
Query: 505 DQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEAL 564
+ A LL EM GV+ SS V++ +L + + ++ A+LR+ +++G++ D Y +
Sbjct: 351 ESARILLKEMEADGVKPSSYVFSRILAGFRDRGDWQKAFAVLREMQASGVRPDRHFYNVM 410
Query: 565 LQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQ 624
+ + A+ F M+E +I + L+ + +L +E++E
Sbjct: 411 IDTFGKYNCLGHAMDAFDRMREEEI-EPDVVTWNTLIDAHCKGGRHDRAMELFEEMRESN 469
Query: 625 RIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTE 684
G +N +I+ ++ + E L M+ G +PN T+ ++V Y G+Y E
Sbjct: 470 -CPPGTTTYNIMINLLGEQERWEGVEAMLSEMKEQGLVPNIITYTTLVDVYGR-SGRYKE 527
Query: 685 VTELWGEMKS 694
+ MK+
Sbjct: 528 AIDCIEAMKA 537
Score = 53.1 bits (126), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 91/391 (23%), Positives = 156/391 (39%), Gaps = 53/391 (13%)
Query: 249 MKPNTNTFNIALAGCLLFETTRKAEQLLDIMPRIGVKADSNLLIIMAHIYERNGRREELR 308
+KP T +N L G + + + AEQ+LD M + GV D ++ Y R GR E R
Sbjct: 295 IKPRTRAYNALLKGYVRIGSLKNAEQVLDEMSQCGVAPDEATYSLLVDAYTRAGRWESAR 354
Query: 309 KLQRHID-EAVNLSDIQFRQFYNCLLSCHLKFGDLNSASKMVLEMLQRAKEAR------- 360
L + ++ + V S F + +L+ GD A ++ EM +A R
Sbjct: 355 ILLKEMEADGVKPSSYVFSR----ILAGFRDRGDWQKAFAVLREM--QASGVRPDRHFYN 408
Query: 361 ---------NSLAAAMLPFNAVGVNNRTPSEQNVNCTNSVDLENSGIIENHILSYEDFTK 411
N L AM F+ + P V +D G H + E F +
Sbjct: 409 VMIDTFGKYNCLGHAMDAFDRMREEEIEP--DVVTWNTLIDAHCKG--GRHDRAMELFEE 464
Query: 412 DRKFVALEAEVK-RVLQTLLGMLQK--QVELITT---EHGILQPTEKIYIKLVKAFLEAG 465
R+ ++ LLG ++ VE + + E G++ P Y LV + +G
Sbjct: 465 MRESNCPPGTTTYNIMINLLGEQERWEGVEAMLSEMKEQGLV-PNIITYTTLVDVYGRSG 523
Query: 466 KTKELTHFLIKAEKENLQVSHDDAALGH-VITLCISLGWLDQAHDLLDEMHLAGVRASSS 524
+ KE + + + L+ S + H ++ G D A +++ M G+ S
Sbjct: 524 RYKEAIDCIEAMKADGLKPS---PTMYHALVNAYAQRGLADHALNVVKAMKADGLEVSIL 580
Query: 525 VYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEM 584
V SL+ A+ E R E ++L+ + G++ D Y L+++ L +
Sbjct: 581 VLNSLINAFGEDRRVVEAFSVLQFMKENGLRPDVITYTTLMKA------------LIRVE 628
Query: 585 KESKIPRSGHQEFEMLVKGCAQNHEAGLMAK 615
+ K+P EM+ GCA + +A M +
Sbjct: 629 QFDKVPVIYE---EMITSGCAPDRKARAMLR 656
>gi|302782381|ref|XP_002972964.1| hypothetical protein SELMODRAFT_441948 [Selaginella moellendorffii]
gi|300159565|gb|EFJ26185.1| hypothetical protein SELMODRAFT_441948 [Selaginella moellendorffii]
Length = 748
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 68/289 (23%), Positives = 126/289 (43%), Gaps = 15/289 (5%)
Query: 447 LQPTEKIYIKLVKAFLEAGKTKELTHFL-IKAEKENLQVSHDDAALGHVITLCISLGWLD 505
+QP Y +LV A+L + KT EL L + + ++ +I C ++
Sbjct: 230 IQPDHVSYEQLVAAYLNS-KTPELKLALEVLDHMHSHELKASQKTYSELIAACWKKSEVE 288
Query: 506 QAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALL 565
A M AG A S V L++ + + L + + AG++ +++CYE LL
Sbjct: 289 NADKCFSAMIAAGHSADSKVLVKLMQLHAQKGNHTRTQQLFQMLKQAGLKANSTCYEQLL 348
Query: 566 QSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKE--G 623
+ A +F+E K+ I + + +L+ CA+ AGL + +Q E G
Sbjct: 349 LAYCKAGCLDQAFTIFRESKQ--IAKPSLIVYNILLDACAK---AGLHLQAMQLYNEVCG 403
Query: 624 QRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYT 683
+ + + I + AE+ KRM L P A T+ SM+ Y A+ G
Sbjct: 404 SGLKANAITYTSAITALVRSGRCAKAEELYKRMLRLKISPTAHTYTSMIHAY-AMKGWTR 462
Query: 684 EVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMME 732
E+ M+S T++ + +++L+ ++RG ++ A +++ M+
Sbjct: 463 SGHEVCVTMRSNCQITAVAY-----NAMLHLYIRGEWYTEAANILSEMD 506
>gi|357463605|ref|XP_003602084.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355491132|gb|AES72335.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 579
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/260 (21%), Positives = 109/260 (41%), Gaps = 18/260 (6%)
Query: 506 QAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALL 565
QA +LL M GV+ + Y +++ Y N+ + + G++ + CY ++
Sbjct: 200 QAMNLLAMMMKKGVKPNVVTYGAIMDGYCLVNQVNKALNIFNVMVQEGVEPNVWCYNIII 259
Query: 566 QSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKE-GQ 624
+K A++LFKEM KI + +L+ G + + +L+ E++ G+
Sbjct: 260 NGLCKKKRVDEAMNLFKEMHWKKI-NPDVVTYNILIDGLCKLGKISTSLELVDEMRSIGK 318
Query: 625 RIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIG---GK 681
+D + +N+++H CK + A +K ++ G PN T+ +++ G G
Sbjct: 319 TVD--IITYNSLLHALCKNHHLDQAITLVKEIKDQGIQPNVCTYTTLIDGLCKDGRLEDA 376
Query: 682 YTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFIDKY 741
Y E+ E T + ++ + G F A +++ ME+ D
Sbjct: 377 YVIFQEILTEGYHITVWT--------YNVMINGLCKKGLFDEALALLSRMEDNACIPDAV 428
Query: 742 KYRTLFLKYHKTLYKGKTPK 761
Y T+ + KG+T K
Sbjct: 429 SYETIIYALSE---KGETVK 445
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 77/177 (43%), Gaps = 4/177 (2%)
Query: 504 LDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEA 563
+D+A +L EMH + Y L+ + + L+ + RS G +D Y +
Sbjct: 268 VDEAMNLFKEMHWKKINPDVVTYNILIDGLCKLGKISTSLELVDEMRSIGKTVDIITYNS 327
Query: 564 LLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEV-KE 622
LL + A+ L KE+K+ I + + L+ G ++ + QE+ E
Sbjct: 328 LLHALCKNHHLDQAITLVKEIKDQGI-QPNVCTYTTLIDGLCKDGRLEDAYVIFQEILTE 386
Query: 623 GQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIG 679
G I V +N +I+ CKK L +A L RM +P+A ++ +++ + G
Sbjct: 387 GYHIT--VWTYNVMINGLCKKGLFDEALALLSRMEDNACIPDAVSYETIIYALSEKG 441
>gi|255558280|ref|XP_002520167.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223540659|gb|EEF42222.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 604
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 74/311 (23%), Positives = 132/311 (42%), Gaps = 14/311 (4%)
Query: 445 GILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWL 504
G+ TE Y L+ + GK +E H L++ E + D + +I +G L
Sbjct: 105 GVCWNTES-YNILMNSLFRLGKIREAHHLLMRMEFKG--CIPDVVSYTTIIDGYCHVGEL 161
Query: 505 DQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEAL 564
+ L+ EM L G++ + Y+S++ ++ + E +LR+ G+ D Y L
Sbjct: 162 QKVVQLVKEMQLKGLKPNLYTYSSIILLLCKSGKVVEGEKVLREMMKRGVFPDHVIYTTL 221
Query: 565 LQSKIVQKDTPGALHLFKEMKESKI-PRSGHQEFEMLVKGCAQNHEAGLMAKLLQE-VKE 622
+ +T A LF EM+ +I P S F L+ G + + + KL E +K+
Sbjct: 222 IDGFCKLGNTQAAYKLFSEMEAREIVPDS--IAFSALICGLSGSGKVVEADKLFNEMIKK 279
Query: 623 GQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKY 682
G D + +I +CK M+ A +M +G PN T+ ++ G G+
Sbjct: 280 GFEPD--EVTYTALIDGYCKLGEMKKAFFLHNQMVQIGLTPNVVTYTALADGLCK-SGEL 336
Query: 683 TEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFIDKYK 742
EL EM + + ++++ + G +A +++ M+E + D
Sbjct: 337 DTANELLHEM----CRKGLQLNISTYNTIVNGLCKAGNILQAVKLMEEMKEAGLHPDTIT 392
Query: 743 YRTLFLKYHKT 753
Y TL Y+KT
Sbjct: 393 YTTLMDAYYKT 403
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 50/233 (21%), Positives = 110/233 (47%), Gaps = 10/233 (4%)
Query: 447 LQPTEKIYIKLVKAFLEAGKTKE---LTHFLIKAEKENLQVSHDDAALGHVITLCISLGW 503
+P E Y L+ + + G+ K+ L + +++ V++ A G LC S G
Sbjct: 281 FEPDEVTYTALIDGYCKLGEMKKAFFLHNQMVQIGLTPNVVTYTALADG----LCKS-GE 335
Query: 504 LDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEA 563
LD A++LL EM G++ + S Y +++ +A + L+ + + AG+ D Y
Sbjct: 336 LDTANELLHEMCRKGLQLNISTYNTIVNGLCKAGNILQAVKLMEEMKEAGLHPDTITYTT 395
Query: 564 LLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEG 623
L+ + + A L +EM + + + F +L+ G + + +LL+ + E
Sbjct: 396 LMDAYYKTGEMVKARELLREMLDRGLQPT-VVTFNVLMNGLCMSGKLEDGERLLKWMLE- 453
Query: 624 QRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYA 676
+ I +N+++ +C + M+ + + + M + G +P++ T++ ++ G+
Sbjct: 454 KGIMPNAATYNSIMKQYCIRNNMRISTEIYRGMCAQGVVPDSNTYNILIKGHC 506
>gi|116309556|emb|CAH66618.1| OSIGBa0144C23.4 [Oryza sativa Indica Group]
Length = 845
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/258 (20%), Positives = 112/258 (43%), Gaps = 11/258 (4%)
Query: 428 TLLGMLQKQVELI--TTEHGILQPTEKIYIKLVKAFLEAGKTKE----LTHFLIKAEKEN 481
++ GM + V + + G++ PT + A + G+T E ++K K +
Sbjct: 326 SISGMWNESVRVFKQMSSCGVI-PTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPD 384
Query: 482 LQVSHDDAALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPRE 541
+ +A+ V +++ W+ H++ + M G+ + V+ L+ AY +
Sbjct: 385 IISYSTNASW--VCYWYVTVVWV-MWHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDK 441
Query: 542 VTALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLV 601
+ D ++ G+ D + ++ S ALH F M + +P S + L+
Sbjct: 442 AMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPS-EAVYGCLI 500
Query: 602 KGCAQNHEAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGH 661
+GC + E +L+ E+ GV ++++I+ CK+ + + + + M G
Sbjct: 501 QGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQ 560
Query: 662 LPNAQTFHSMVTGYAAIG 679
PN TF+S++ GY +G
Sbjct: 561 RPNVVTFNSLMEGYCLVG 578
Score = 64.3 bits (155), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 65/314 (20%), Positives = 135/314 (42%), Gaps = 17/314 (5%)
Query: 431 GMLQKQVELIT--TEHGILQPTEKIYIKLVKAFLEAGKT---KELTHFLIKAEKENLQVS 485
G L K ELI+ I P K + ++ + G+ K++ +++ + V+
Sbjct: 507 GELVKAKELISEMMNKDIPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVT 566
Query: 486 HDDAALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTAL 545
+ G+ + +G +++A LLD M G+ + +Y +L+ Y + R + +
Sbjct: 567 FNSLMEGYCL-----VGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTV 621
Query: 546 LRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCA 605
RD G++ + Y +L + T A +F EM ES S H + +++ G
Sbjct: 622 FRDMLHKGVKPTSVLYSIILHGLFQARRTTAAKKMFHEMIESGTTVSIHT-YGVVLGGLC 680
Query: 606 QNHEAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNA 665
+N+ A +L E + + +N VI K Q+A++ + + G +PN
Sbjct: 681 RNNCTD-EANMLLEKLFAMNVKFDIITFNIVISAMFKVGRRQEAKELFDAISTYGLVPNI 739
Query: 666 QTFHSMVTGYAAIGGKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARAN 725
QT+ M+T Y E L+ ++ ++ D LL+ ++ + A+A+
Sbjct: 740 QTYSMMITNLIK-EESYEEADNLFISVEKSGHAS----DSRLLNHIVRMLLNKAEVAKAS 794
Query: 726 EVVAMMEEGKMFID 739
++++ E + ++
Sbjct: 795 NYLSIIGENNLTLE 808
Score = 43.9 bits (102), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 42/174 (24%), Positives = 79/174 (45%), Gaps = 14/174 (8%)
Query: 526 YASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMK 585
Y L+ Y +RP A++ G+ D Y +L+ + + A LF EM
Sbjct: 179 YNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSY-SLIYGFVKDGEVDKAHCLFLEMM 237
Query: 586 ESKI-PRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRIDCGV----HDWNNVIHFF 640
E + P+ ++K + E ++Q++ +D G+ ++ +I
Sbjct: 238 EQGVLPKI--LICNSIIKELCKMKEMDKAESIVQKM-----VDSGIAPDLFTYSLIIDGL 290
Query: 641 CKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEMKS 694
CK + M AE+ L++M G PN+ T++S++ GY +I G + E ++ +M S
Sbjct: 291 CKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGY-SISGMWNESVRVFKQMSS 343
>gi|302823465|ref|XP_002993385.1| hypothetical protein SELMODRAFT_449117 [Selaginella moellendorffii]
gi|300138816|gb|EFJ05570.1| hypothetical protein SELMODRAFT_449117 [Selaginella moellendorffii]
Length = 748
Score = 65.1 bits (157), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 68/289 (23%), Positives = 126/289 (43%), Gaps = 15/289 (5%)
Query: 447 LQPTEKIYIKLVKAFLEAGKTKELTHFL-IKAEKENLQVSHDDAALGHVITLCISLGWLD 505
+QP Y +LV A+L + KT EL L + + ++ +I C ++
Sbjct: 230 IQPDHVSYEQLVAAYLNS-KTPELKLALEVLDHMHSHELKASQKTYSELIAACWKKSEVE 288
Query: 506 QAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALL 565
A M AG A S V L++ + + L + + AG++ +++CYE LL
Sbjct: 289 NADKCFSAMIAAGHSADSKVLVKLMQLHAQKGNHTRTQQLFQMLKQAGLKANSTCYEQLL 348
Query: 566 QSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKE--G 623
+ A +F+E K+ I + + +L+ CA+ AGL + +Q E G
Sbjct: 349 LAYCKAGCLDQAFTIFRESKQ--IAKPSLIVYNILLDACAK---AGLHLQAMQLYNEVCG 403
Query: 624 QRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYT 683
+ + + I + AE+ KRM L P A T+ SM+ Y A+ G
Sbjct: 404 SGLKANAITYTSAITALVRSGRCAKAEELYKRMLRLKISPTAHTYTSMIHAY-AMKGWTR 462
Query: 684 EVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMME 732
E+ M+S T++ + +++L+ ++RG ++ A +++ M+
Sbjct: 463 SGHEVCVTMRSNCQITAVAY-----NAMLHLYIRGEWYTEAANILSEMD 506
>gi|359487666|ref|XP_002277942.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g09820-like [Vitis vinifera]
Length = 609
Score = 65.1 bits (157), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 63/272 (23%), Positives = 119/272 (43%), Gaps = 18/272 (6%)
Query: 494 VITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAG 553
VI +G +A D++++M G S Y +++ Y +A + + ALL++ +
Sbjct: 235 VINGLCKVGKFQKAGDVVEDMKAWGFSPSVITYNTIIDGYCKAGKMFKADALLKEMVAKR 294
Query: 554 IQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQ----EFEMLVKGCAQNHE 609
I + + L+ ++ A +F+EM+ R G Q + L+ G N +
Sbjct: 295 IHPNEITFNILIDGFCRDENVTAAKKVFEEMQ-----RQGLQPNVVTYNSLINGLCSNGK 349
Query: 610 AGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFH 669
A LQ+ G + V +N +I+ FCKK+++++A + L + G PN TF+
Sbjct: 350 LD-EALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEAREMLDDIGKRGLAPNVITFN 408
Query: 670 SMVTGYAAIGGKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVA 729
+++ Y GK + + + ++S T + + + ++ F R G A ++
Sbjct: 409 TLIDAY----GKAGRMDDAF-LLRSMMLDTGVCPNVSTYNCLIVGFCREGNVKEARKLAK 463
Query: 730 MMEEGKMFIDKYKYRTLFLKYHKTLYKGKTPK 761
ME + D Y L K KG+T K
Sbjct: 464 EMEGNGLKADLVTYNILVDALCK---KGETRK 492
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 94/224 (41%), Gaps = 8/224 (3%)
Query: 447 LQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQ 506
L+P Y L+ F + KE L K L + + +I G +D
Sbjct: 365 LKPNVVTYNALINGFCKKKMLKEAREMLDDIGKRGL--APNVITFNTLIDAYGKAGRMDD 422
Query: 507 AHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQ 566
A L M GV + S Y L+ + +E L ++ G++ D Y L+
Sbjct: 423 AFLLRSMMLDTGVCPNVSTYNCLIVGFCREGNVKEARKLAKEMEGNGLKADLVTYNILVD 482
Query: 567 SKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQ--NHEAGLMAKLLQEVKEGQ 624
+ + +T A+ L EM E + S H + L+ G + N A L + L E K+G+
Sbjct: 483 ALCKKGETRKAVRLLDEMFEVGLNPS-HLTYNALIDGYFREGNSTAALNVRTLME-KKGR 540
Query: 625 RIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTF 668
R + + +N +I FC K +++A + L M G +PN T+
Sbjct: 541 RAN--IVTYNVLIKGFCNKGKLEEANRLLNEMLEKGLIPNRTTY 582
Score = 46.2 bits (108), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 48/232 (20%), Positives = 96/232 (41%), Gaps = 10/232 (4%)
Query: 447 LQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQ---VSHDDAALGHVITLCISLGW 503
+ P E + L+ F + +++ LQ V+++ G LC S G
Sbjct: 295 IHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQGLQPNVVTYNSLING----LC-SNGK 349
Query: 504 LDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEA 563
LD+A L D+M G++ + Y +L+ + + +E +L D G+ + +
Sbjct: 350 LDEALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEAREMLDDIGKRGLAPNVITFNT 409
Query: 564 LLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEG 623
L+ + A L M ++ + + L+ G + KL +E+ EG
Sbjct: 410 LIDAYGKAGRMDDAFLLRSMMLDTGVC-PNVSTYNCLIVGFCREGNVKEARKLAKEM-EG 467
Query: 624 QRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGY 675
+ + +N ++ CKK + A + L M +G P+ T+++++ GY
Sbjct: 468 NGLKADLVTYNILVDALCKKGETRKAVRLLDEMFEVGLNPSHLTYNALIDGY 519
>gi|168055632|ref|XP_001779828.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162668740|gb|EDQ55341.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 730
Score = 65.1 bits (157), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/237 (21%), Positives = 94/237 (39%), Gaps = 12/237 (5%)
Query: 447 LQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQ 506
+QP E Y + A +E T + + N + D ++ + GW ++
Sbjct: 184 IQPDEYTYNTAITACASGSLCEEATELFTQMKSSN--CTPDRVTYNALLDVYGKAGWYNE 241
Query: 507 AHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQ 566
A ++L EM AG + Y LL A+ A + S GI+ D Y +LL
Sbjct: 242 AANVLKEMESAGCLPNIVTYNELLSAFGRAGLCNAAAEMKDSMVSKGIEPDVFTYTSLLS 301
Query: 567 SKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRI 626
+ A+ ++ +M+ S + F L+ +N M + ++++
Sbjct: 302 AYSRAGKVEQAMEIYNQMRTSNCTPNSFT-FNALIGMHGKNKNFSEMMVIFEDMQA---- 356
Query: 627 DCGVH----DWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIG 679
CGV WN+++ F K + + K + M+ G P+ TF+ ++ Y G
Sbjct: 357 -CGVEPDIVTWNSLLGAFGKNGMYSEVLKVFRGMKKAGFEPDKATFNILIEAYGRCG 412
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 101/533 (18%), Positives = 208/533 (39%), Gaps = 53/533 (9%)
Query: 248 AMKPNTNTFNIALAGCLLFETTRKAEQLLDIMPRIGVKADSNLLIIMAHIYERNGRREEL 307
++P+ T+N A+ C +A +L M D + +Y + G E
Sbjct: 183 GIQPDEYTYNTAITACASGSLCEEATELFTQMKSSNCTPDRVTYNALLDVYGKAGWYNEA 242
Query: 308 RKLQRHIDEAVNLSDIQFRQFYNCLLSCHLKFGDLNSASKMVLEMLQRAKEAR------- 360
+ + ++ A L +I YN LLS + G N+A++M M+ + E
Sbjct: 243 ANVLKEMESAGCLPNIVT---YNELLSAFGRAGLCNAAAEMKDSMVSKGIEPDVFTYTSL 299
Query: 361 -------NSLAAAMLPFNAVGVNNRTPSEQNVNCTNSVDLENSGIIENHILSYEDFTKDR 413
+ AM +N + +N TP+ N + +N E ++ +D
Sbjct: 300 LSAYSRAGKVEQAMEIYNQMRTSNCTPNSFTFNALIGMHGKNKNFSEMMVI-----FEDM 354
Query: 414 KFVALEAEVKRVLQTLLGMLQKQ---VELITTEHGI----LQPTEKIYIKLVKAFLEAGK 466
+ +E ++ +LLG K E++ G+ +P + + L++A+ G
Sbjct: 355 QACGVEPDIV-TWNSLLGAFGKNGMYSEVLKVFRGMKKAGFEPDKATFNILIEAYGRCGS 413
Query: 467 TKE---LTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQAHDLLDEMHLAGVRASS 523
+ + + +++A + D A ++ G + A +LDE++ + + +
Sbjct: 414 SDQALSIYDGMLQA-----GCTPDLATFNTLLAALAREGRWEHAELILDELNRSSYKPND 468
Query: 524 SVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEA--LLQSKIVQKDTPGALHLF 581
YAS+L AY ++ ++ + + + L+ SK D A F
Sbjct: 469 IAYASMLHAYANGGELEKLKEMVDTLHTIYVPFTKILLKTFVLVYSKCSLVDE--AEDAF 526
Query: 582 KEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVK--EGQRIDCGVHDWNNVIHF 639
M+ S F ++ + + G+M K ++ V +N ++
Sbjct: 527 LAMRHHGY-LSDTSTFNAMI---SMYGKKGMMDKATDTFALLRSTGLEPDVVTYNCLMGM 582
Query: 640 FCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEMKSFASST 699
+ ++ + + E L+ + G P+ ++++++ Y+ G+ + T ++ EM S
Sbjct: 583 YGREGMYRKCEATLRECMAAGQTPDLVSYNTVIFSYSK-HGQLSSATRIFHEM----VSN 637
Query: 700 SMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFIDKYKYRTLFLKYHK 752
+ D ++ + +V GG F A VV M + D+ YRTL Y K
Sbjct: 638 GIQPDSFTYNTFVGCYVNGGMFPEALSVVKHMHKTGCKPDEVTYRTLVDAYCK 690
Score = 52.8 bits (125), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 57/235 (24%), Positives = 94/235 (40%), Gaps = 17/235 (7%)
Query: 431 GMLQKQVELITTEHGILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSH---- 486
G L+K E++ T H I P KI L+K F+ L +AE L + H
Sbjct: 482 GELEKLKEMVDTLHTIYVPFTKI---LLKTFVLVYSKCSLVD---EAEDAFLAMRHHGYL 535
Query: 487 -DDAALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTAL 545
D + +I++ G +D+A D + G+ Y L+ Y R+ A
Sbjct: 536 SDTSTFNAMISMYGKKGMMDKATDTFALLRSTGLEPDVVTYNCLMGMYGREGMYRKCEAT 595
Query: 546 LRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCA 605
LR+ +AG D Y ++ S A +F EM + I + V GC
Sbjct: 596 LRECMAAGQTPDLVSYNTVIFSYSKHGQLSSATRIFHEMVSNGIQPDSFT-YNTFV-GCY 653
Query: 606 QNHEAGLMAKLLQEVKEGQRIDCGVHD--WNNVIHFFCKKRLMQDAEKALKRMRS 658
N G+ + L VK + C + + ++ +CK ++ E+ LK ++S
Sbjct: 654 VN--GGMFPEALSVVKHMHKTGCKPDEVTYRTLVDAYCKIGKFEEVERILKFIKS 706
>gi|414887034|tpg|DAA63048.1| TPA: crs2 associated factor1 [Zea mays]
Length = 617
Score = 65.1 bits (157), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 67/325 (20%), Positives = 134/325 (41%), Gaps = 12/325 (3%)
Query: 445 GILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWL 504
G ++P + Y L+K ++ K L E V+ D+A ++ G
Sbjct: 293 GEIKPRTRAYNALLKGYVRIASLKNAEQVL--DEMSQCGVAPDEATYSLLVDAYTRAGRW 350
Query: 505 DQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEAL 564
+ A LL EM GV+ SS V++ +L + + ++ A+LR+ +++G++ D Y +
Sbjct: 351 ESARILLKEMEADGVKPSSYVFSRILAGFRDRGDWQKAFAVLREMQASGVRPDRHFYNVM 410
Query: 565 LQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQ 624
+ + A+ F +M+E I + L+ + A+L +E++E
Sbjct: 411 IDTFGKYNCLGHAMDAFNKMREEGI-EPDVVTWNTLIDAHCKGGRHDRAAELFEEMRESN 469
Query: 625 RIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTE 684
G +N +I+ ++ + E L M+ G +PN T+ ++V Y G+Y E
Sbjct: 470 -CPPGTTTYNIMINLLGEQEHWEGVEAMLSEMKEQGLVPNIITYTTLVDVYGR-SGRYKE 527
Query: 685 VTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFIDKYKYR 744
+ MK+ S L+++ +R +V+ K I ++
Sbjct: 528 AIDCIEAMKADGLKPSPTMYHALVNAYAQRGLR-------PDVITYTTLMKALIRVEQFD 580
Query: 745 TLFLKYHKTLYKGKTPKFQTEAQLK 769
+ + Y + + G P + A L+
Sbjct: 581 KVPVIYEEMITSGCAPDRKARAMLR 605
Score = 43.1 bits (100), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 49/105 (46%), Gaps = 5/105 (4%)
Query: 249 MKPNTNTFNIALAGCLLFETTRKAEQLLDIMPRIGVKADSNLLIIMAHIYERNGRREELR 308
+KP T +N L G + + + AEQ+LD M + GV D ++ Y R GR E R
Sbjct: 295 IKPRTRAYNALLKGYVRIASLKNAEQVLDEMSQCGVAPDEATYSLLVDAYTRAGRWESAR 354
Query: 309 KLQRHID-EAVNLSDIQFRQFYNCLLSCHLKFGDLNSASKMVLEM 352
L + ++ + V S F + +L+ GD A ++ EM
Sbjct: 355 ILLKEMEADGVKPSSYVFSR----ILAGFRDRGDWQKAFAVLREM 395
>gi|357473123|ref|XP_003606846.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355507901|gb|AES89043.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 624
Score = 65.1 bits (157), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 65/286 (22%), Positives = 119/286 (41%), Gaps = 44/286 (15%)
Query: 494 VITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAG 553
+I C + G LD+A DEM G+ AS Y L+ A R E ++++ R G
Sbjct: 328 LIDGCCNKGDLDKAFAYRDEMMNRGIVASVFTYNLLIHALFLEKRIEEAEDMIKEMREKG 387
Query: 554 IQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKI---------------PRSGHQE-- 596
++ D Y + + AL LF EM E I R+ E
Sbjct: 388 VEPDVVTYNIQINGYCRCGNAKKALSLFDEMVEKNIRPTVETYTSLIDVFGKRNRMSEAE 447
Query: 597 -----------------FEMLVKGCAQNHEAGLMAKLLQEVKEGQRIDCGVHDWNNVIHF 639
F L+ G N +LL+E+ + + V +N ++
Sbjct: 448 EKFKKSIKEGMLPDIIMFNALIDGHCVNGNIDRAFQLLKEMDNAKVVPDEV-TFNTLMQG 506
Query: 640 FCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEMKSFASST 699
+C++R +++A+K L M+ G P+ +++++++GY+ G + E++ EM
Sbjct: 507 YCRERKVEEAKKLLDEMKERGIKPDHISYNTLISGYSK-RGDMKDALEVFDEM------L 559
Query: 700 SMNFDEELL--DSVLYTFVRGGFFARANEVVAMMEEGKMFIDKYKY 743
S+ FD LL ++++ + + G A E++ M+ + D Y
Sbjct: 560 SLGFDPTLLTYNALIQGYSKIGEADHAEELLREMQSKGITPDDSTY 605
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 107/471 (22%), Positives = 187/471 (39%), Gaps = 82/471 (17%)
Query: 251 PNTNTFNIALAGCLLFETTRKAEQLLDIMPRIGVKADSNLLIIMAHIYERNGRREELRKL 310
P T T N L+ L + A + + M ++ +K+ IM +I R G+ ++ +
Sbjct: 180 PKTETCNSLLSLLLKLNKIKMAWFVYEEMVKMNIKSSIVTFNIMINILCREGKWKKAKDF 239
Query: 311 QRHIDEAVNLSDIQFRQFYNCLLSCHLKFGDLNSASKMVLEML----------------- 353
H++ ++ YN +++ + G +ASK+ M
Sbjct: 240 IGHMEVYGVKPNV---VTYNTVINGYCLRGKFEAASKIFKTMKDKNLKPDCYTYNSFISR 296
Query: 354 ----QRAKEARNSLA----AAMLPFNAVGVNNRTPSEQNVNCTNSVDLENSGIIENHILS 405
+R +EA L + ++P NAV N C N DL+ + +
Sbjct: 297 LCKERRIEEASGVLCKLLESGLVP-NAVTYNALIDG-----CCNKGDLDKA-------FA 343
Query: 406 YEDFTKDRKFVALEAEVKRVLQTLLGMLQKQVELITTEHGILQPTEKIYIKLVKAFLEAG 465
Y D +R VA ++ L L+K++E ++K E G
Sbjct: 344 YRDEMMNRGIVASVFTYNLLIHALF--LEKRIEEAE--------------DMIKEMREKG 387
Query: 466 KTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSV 525
++ + N+Q++ G+ G +A L DEM +R +
Sbjct: 388 VEPDVVTY-------NIQIN------GYC-----RCGNAKKALSLFDEMVEKNIRPTVET 429
Query: 526 YASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMK 585
Y SL+ + + NR E + + G+ D + AL+ V + A L KEM
Sbjct: 430 YTSLIDVFGKRNRMSEAEEKFKKSIKEGMLPDIIMFNALIDGHCVNGNIDRAFQLLKEMD 489
Query: 586 ESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKE-GQRIDCGVH-DWNNVIHFFCKK 643
+K+ F L++G + + KLL E+KE G + D H +N +I + K+
Sbjct: 490 NAKV-VPDEVTFNTLMQGYCRERKVEEAKKLLDEMKERGIKPD---HISYNTLISGYSKR 545
Query: 644 RLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEMKS 694
M+DA + M SLG P T+++++ GY+ I G+ EL EM+S
Sbjct: 546 GDMKDALEVFDEMLSLGFDPTLLTYNALIQGYSKI-GEADHAEELLREMQS 595
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 86/400 (21%), Positives = 147/400 (36%), Gaps = 78/400 (19%)
Query: 248 AMKPNTNTFNIALAGCLLFETTRKAEQLLDIMPRIGVKADSNLLIIMAHIYERNGRREEL 307
+KPN T+N + G L A ++ M +K D Y N L
Sbjct: 247 GVKPNVVTYNTVINGYCLRGKFEAASKIFKTMKDKNLKPDC---------YTYNSFISRL 297
Query: 308 RKLQRHIDEAVNL-------SDIQFRQFYNCLLSCHLKFGDLNSASKMVLEMLQRAKEAR 360
K +R I+EA + + YN L+ GDL+ A EM+ R
Sbjct: 298 CK-ERRIEEASGVLCKLLESGLVPNAVTYNALIDGCCNKGDLDKAFAYRDEMMNRG---- 352
Query: 361 NSLAAAMLPFNAVGVNNRTPSEQNVNCTNSVDLENSGIIENHILSYEDFTKDRKFVALEA 420
+ A++ +N L ++ +E I ED K+ + +E
Sbjct: 353 --IVASVFTYNL--------------------LIHALFLEKRIEEAEDMIKEMREKGVEP 390
Query: 421 EV----------------KRVLQTLLGMLQKQVELITTEHGILQPTEKIYIKLVKAFLEA 464
+V K+ L M++K + +PT + Y L+ F +
Sbjct: 391 DVVTYNIQINGYCRCGNAKKALSLFDEMVEKNI----------RPTVETYTSLIDVFGKR 440
Query: 465 GKTKELTHFLIKAEKENLQ---VSHDDAALGHVITLCISLGWLDQAHDLLDEMHLAGVRA 521
+ E K+ KE + + + GH + G +D+A LL EM A V
Sbjct: 441 NRMSEAEEKFKKSIKEGMLPDIIMFNALIDGHCVN-----GNIDRAFQLLKEMDNAKVVP 495
Query: 522 SSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLF 581
+ +L++ Y + E LL + + GI+ D Y L+ + D AL +F
Sbjct: 496 DEVTFNTLMQGYCRERKVEEAKKLLDEMKERGIKPDHISYNTLISGYSKRGDMKDALEVF 555
Query: 582 KEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVK 621
EM + + L++G ++ EA +LL+E++
Sbjct: 556 DEMLSLGFDPT-LLTYNALIQGYSKIGEADHAEELLREMQ 594
Score = 39.7 bits (91), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 67/323 (20%), Positives = 122/323 (37%), Gaps = 25/323 (7%)
Query: 251 PNTNTFNIALAGCLLFETTRKAEQLLDIMPRIGVKADSNLLIIMAHIYERNGRREELRKL 310
PN T+N + GC KA D M G+ A ++ H R EE +
Sbjct: 320 PNAVTYNALIDGCCNKGDLDKAFAYRDEMMNRGIVASVFTYNLLIHALFLEKRIEEAEDM 379
Query: 311 QRHIDEAVNLSDIQFRQFYNCLLSCHLKFGDLNSASKMVLEMLQRAKEARNSLAAAMLPF 370
+ + E D+ YN ++ + + G+ A + EM++ K R ++
Sbjct: 380 IKEMREKGVEPDVVT---YNIQINGYCRCGNAKKALSLFDEMVE--KNIRPTVETYTSLI 434
Query: 371 NAVGVNNRTPSEQNVNCTNSVDLENSGIIENHILSYEDFTKDRKFVALEAEVKRVLQTLL 430
+ G NR SE S+ G++ + I+ F + + R Q L
Sbjct: 435 DVFGKRNRM-SEAEEKFKKSI---KEGMLPDIIM----FNALIDGHCVNGNIDRAFQLLK 486
Query: 431 GMLQKQVELITTEHGILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAA 490
M +V P E + L++ + K +E L + ++ ++ H +
Sbjct: 487 EMDNAKV----------VPDEVTFNTLMQGYCRERKVEEAKKLLDEMKERGIKPDH--IS 534
Query: 491 LGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDAR 550
+I+ G + A ++ DEM G + Y +L++ Y + LLR+ +
Sbjct: 535 YNTLISGYSKRGDMKDALEVFDEMLSLGFDPTLLTYNALIQGYSKIGEADHAEELLREMQ 594
Query: 551 SAGIQLDASCYEALLQSKIVQKD 573
S GI D S Y ++++ D
Sbjct: 595 SKGITPDDSTYLYVIEAMKTNDD 617
>gi|224130828|ref|XP_002328386.1| predicted protein [Populus trichocarpa]
gi|222838101|gb|EEE76466.1| predicted protein [Populus trichocarpa]
Length = 617
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 104/220 (47%), Gaps = 8/220 (3%)
Query: 504 LDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEA 563
+++A LL EM + + Y++L++ + RPRE L ++ S+G+ D Y
Sbjct: 392 MNEAKRLLSEMSEKNLTPDTVTYSTLMQGLCQVGRPREALNLFKEMCSSGLLPDLMAYSI 451
Query: 564 LLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVK-E 622
LL AL L KEM E +I + + +L++G + + +L ++ +
Sbjct: 452 LLDGFCKHGHLDEALKLLKEMHERRI-KPNIILYTILIRGMFIAGKLEVAKELFSKLSAD 510
Query: 623 GQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKY 682
G R D + +N +I K+ L +A + ++M G LP++ +++ ++ G+
Sbjct: 511 GIRPD--IWTYNVMIKGLLKEGLSDEAYEFFRKMEDDGFLPDSCSYNVIIQGFLQNQDSS 568
Query: 683 TE---VTELWGEMKSFASST-SMNFDEELLDSVLYTFVRG 718
T + E+ G+ S SST M D E D ++ F+RG
Sbjct: 569 TAIQLIDEMVGKRFSADSSTFQMLLDLESHDEIISRFMRG 608
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/248 (22%), Positives = 102/248 (41%), Gaps = 15/248 (6%)
Query: 507 AHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQ 566
A L ++M L GV + L+ + +++ GIQ DA + L+
Sbjct: 115 AVSLCNQMDLFGVTHNVYSLNVLINCLCRLSHVDFAVSVMGKMFKLGIQPDAITFNTLIN 174
Query: 567 SKIVQKDTPGALHLFKEMKESKIPRSGHQ----EFEMLVKGCAQNHEAGLMAKLLQEVKE 622
+ A+ LF EM SGH+ + ++ G +N + ++ +++ E
Sbjct: 175 GLCNEGKIKEAVGLFNEM-----VWSGHEPNVISYNTVINGLCKNGNTIMAVRVFRKM-E 228
Query: 623 GQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKY 682
R V +N +I CK RL+ +A + L M G P+ T+++++ G+ ++ G+
Sbjct: 229 QNRGKPNVVTYNTIIDSLCKDRLVNEAVEFLSEMVDRGIPPDVVTYNTILHGFCSL-GQL 287
Query: 683 TEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFIDKYK 742
E T L+ EM ++ D + ++ + G + A V M E + Y
Sbjct: 288 NEATRLFKEM----VGRNVMPDTVTFNILVDGLCKEGMVSEARCVSETMTEKGAEPNAYT 343
Query: 743 YRTLFLKY 750
Y L Y
Sbjct: 344 YNALMDGY 351
Score = 49.3 bits (116), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 35/196 (17%), Positives = 86/196 (43%), Gaps = 2/196 (1%)
Query: 484 VSHDDAALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVT 543
V+H+ +L +I L +D A ++ +M G++ + + +L+ + +E
Sbjct: 127 VTHNVYSLNVLINCLCRLSHVDFAVSVMGKMFKLGIQPDAITFNTLINGLCNEGKIKEAV 186
Query: 544 ALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKG 603
L + +G + + Y ++ +T A+ +F++M++++ + + ++
Sbjct: 187 GLFNEMVWSGHEPNVISYNTVINGLCKNGNTIMAVRVFRKMEQNR-GKPNVVTYNTIIDS 245
Query: 604 CAQNHEAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLP 663
++ + L E+ + + I V +N ++H FC + +A + K M +P
Sbjct: 246 LCKDRLVNEAVEFLSEMVD-RGIPPDVVTYNTILHGFCSLGQLNEATRLFKEMVGRNVMP 304
Query: 664 NAQTFHSMVTGYAAIG 679
+ TF+ +V G G
Sbjct: 305 DTVTFNILVDGLCKEG 320
Score = 41.2 bits (95), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 36/175 (20%), Positives = 76/175 (43%), Gaps = 5/175 (2%)
Query: 447 LQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQ 506
L P Y L++ + G+ +E + + L D A ++ G LD+
Sbjct: 407 LTPDTVTYSTLMQGLCQVGRPREALNLFKEMCSSGLL--PDLMAYSILLDGFCKHGHLDE 464
Query: 507 AHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQ 566
A LL EMH ++ + +Y L++ A + L + GI+ D Y +++
Sbjct: 465 ALKLLKEMHERRIKPNIILYTILIRGMFIAGKLEVAKELFSKLSADGIRPDIWTYNVMIK 524
Query: 567 SKIVQKDTPGALHLFKEMKESK-IPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEV 620
+ + + A F++M++ +P S + ++++G QN ++ +L+ E+
Sbjct: 525 GLLKEGLSDEAYEFFRKMEDDGFLPDSC--SYNVIIQGFLQNQDSSTAIQLIDEM 577
>gi|6730642|gb|AAF27063.1|AC008262_12 F4N2.23 [Arabidopsis thaliana]
Length = 857
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/90 (41%), Positives = 51/90 (56%), Gaps = 5/90 (5%)
Query: 656 MRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEMKSFASSTSMN----FDEELLDSV 711
M L + PN QT+ S++ GY + G KY V LW E+K SS D L+D+
Sbjct: 1 MVFLRYEPNNQTYLSLINGYVS-GEKYFNVLLLWNEIKGKISSVEAEKRSRLDHALVDAF 59
Query: 712 LYTFVRGGFFARANEVVAMMEEGKMFIDKY 741
LY V+GGFF A +VV +E K+F+DK+
Sbjct: 60 LYALVKGGFFDAAMQVVEKSQEMKIFVDKW 89
>gi|356562783|ref|XP_003549648.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74850,
chloroplastic-like [Glycine max]
Length = 859
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 65/310 (20%), Positives = 129/310 (41%), Gaps = 11/310 (3%)
Query: 444 HGILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGW 503
H +QP Y L+ A G E + + E+ + D +++ L
Sbjct: 235 HEGIQPDVITYNTLLGACAHRGLGDE-AEMVFRTMNES-GIVPDINTYSYLVQTFGKLNR 292
Query: 504 LDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEA 563
L++ +LL EM G + Y LL+AY E +E + R ++AG +A+ Y
Sbjct: 293 LEKVSELLREMESGGNLPDITSYNVLLEAYAELGSIKEAMDVFRQMQAAGCVANAATYSV 352
Query: 564 LLQSKIVQKDTPGALHLFKEMKESKI-PRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKE 622
LL +F EMK S P +G + +L++ + + L ++ E
Sbjct: 353 LLNLYGKHGRYDDVRDIFLEMKVSNTDPDAG--TYNILIQVFGEGGYFKEVVTLFHDMVE 410
Query: 623 GQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKY 682
+ ++ + + +I K L +DA+K L M G +P+++ + ++ + Y
Sbjct: 411 -ENVEPNMETYEGLIFACGKGGLYEDAKKILLHMNEKGIVPSSKAYTGVIEAFGQ-AALY 468
Query: 683 TEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFIDKYK 742
E ++ M S+ ++ E +S ++ F RGG + A +++ M E + D +
Sbjct: 469 EEALVVFNTMNEVGSNPTV----ETYNSFIHAFARGGLYKEAEAILSRMNESGLKRDVHS 524
Query: 743 YRTLFLKYHK 752
+ + + +
Sbjct: 525 FNGVIKAFRQ 534
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 85/431 (19%), Positives = 159/431 (36%), Gaps = 66/431 (15%)
Query: 248 AMKPNTNTFNIALAGCLLFETTRKAEQLLDIMPRIGVKADSNLLIIMAHIYERNGRREEL 307
++P+ T+N L C +AE + M G+ D N + + + R E++
Sbjct: 237 GIQPDVITYNTLLGACAHRGLGDEAEMVFRTMNESGIVPDINTYSYLVQTFGKLNRLEKV 296
Query: 308 RKLQRHIDEAVNLSDIQFRQFYNCLLSCHLKFGDLNSASKMVLEMLQRAKEARNSLAAAM 367
+L R ++ NL DI YN LL + + G + A V +Q A N+ ++
Sbjct: 297 SELLREMESGGNLPDITS---YNVLLEAYAELGSIKEAMD-VFRQMQAAGCVANAATYSV 352
Query: 368 LPFNAVGVNNRTPSEQNVNCTNSVDLENSGIIENHILSYEDFTKDRKFVALEAEVKRVLQ 427
L N G + R Y+D + + LE +V
Sbjct: 353 L-LNLYGKHGR---------------------------YDDV----RDIFLEMKVSNT-- 378
Query: 428 TLLGMLQKQVELITTEHGILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHD 487
P Y L++ F E G KE+ +EN++ + +
Sbjct: 379 --------------------DPDAGTYNILIQVFGEGGYFKEVVTLFHDMVEENVEPNME 418
Query: 488 DAALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLR 547
+I C G + A +L M+ G+ SS Y +++A+ +A E +
Sbjct: 419 --TYEGLIFACGKGGLYEDAKKILLHMNEKGIVPSSKAYTGVIEAFGQAALYEEALVVFN 476
Query: 548 DARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQN 607
G Y + + + A + M ES + R H F ++K Q
Sbjct: 477 TMNEVGSNPTVETYNSFIHAFARGGLYKEAEAILSRMNESGLKRDVHS-FNGVIKAFRQ- 534
Query: 608 HEAGLMAKLLQEVKEGQRIDCGVHDWN--NVIHFFCKKRLMQDAEKALKRMRSLGHLPNA 665
G + ++ E ++ +C ++ V+ +C L+ ++E+ + +++ G LP+
Sbjct: 535 --GGQYEEAVKSYVEMEKANCEPNELTLEVVLSVYCSAGLVDESEEQFQEIKASGILPSV 592
Query: 666 QTFHSMVTGYA 676
+ M+ YA
Sbjct: 593 MCYCLMLALYA 603
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 102/504 (20%), Positives = 200/504 (39%), Gaps = 89/504 (17%)
Query: 270 RKAEQLLDIMPR-IGVKADSNLLIIMAHIYERNGRREELRKLQRHIDEAVNLSDIQFRQF 328
+++ +L M R I K + ++ IM + R G ++ R++ DE + +
Sbjct: 117 QRSLRLFKYMQRQIWCKPNEHIYTIMITLLGREGLLDKCREV---FDEMPSNGVARTVYV 173
Query: 329 YNCLLSCHLKFGDLNSASKMVLEMLQRAKEARNSLAAAMLPFNAVGVNNRTPSEQNVNCT 388
Y +++ + + G +++ LE+L K+ R ++ ++L +N V +N
Sbjct: 174 YTAVINAYGRNGQFHAS----LELLNGMKQER--VSPSILTYNTV-----------INAC 216
Query: 389 NSVDLENSGI-----------IENHILSYEDFTKDRKFVALEAEVKRVLQTLLGMLQKQV 437
L+ G+ I+ +++Y L E + V +T+
Sbjct: 217 ARGGLDWEGLLGLFAEMRHEGIQPDVITYNTLLGACAHRGLGDEAEMVFRTM-------- 268
Query: 438 ELITTEHGILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKE-NLQVSHDDAALGHVIT 496
E GI+ P Y LV+ F + + ++++ L + E NL D + ++
Sbjct: 269 ----NESGIV-PDINTYSYLVQTFGKLNRLEKVSELLREMESGGNLP---DITSYNVLLE 320
Query: 497 LCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQL 556
LG + +A D+ +M AG A+++ Y+ LL Y + R +V + + + +
Sbjct: 321 AYAELGSIKEAMDVFRQMQAAGCVANAATYSVLLNLYGKHGRYDDVRDIFLEMKVSNTDP 380
Query: 557 DASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQN--------- 607
DA Y L+Q + LF +M E + + +E L+ C +
Sbjct: 381 DAGTYNILIQVFGEGGYFKEVVTLFHDMVEENV-EPNMETYEGLIFACGKGGLYEDAKKI 439
Query: 608 ----HEAGLM--AKLLQEVKE--GQRI-----------------DCGVHDWNNVIHFFCK 642
+E G++ +K V E GQ + V +N+ IH F +
Sbjct: 440 LLHMNEKGIVPSSKAYTGVIEAFGQAALYEEALVVFNTMNEVGSNPTVETYNSFIHAFAR 499
Query: 643 KRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEMKSFASSTSMN 702
L ++AE L RM G + +F+ ++ + GG+Y E + + EM+ +
Sbjct: 500 GGLYKEAEAILSRMNESGLKRDVHSFNGVIKAFRQ-GGQYEEAVKSYVEME----KANCE 554
Query: 703 FDEELLDSVLYTFVRGGFFARANE 726
+E L+ VL + G + E
Sbjct: 555 PNELTLEVVLSVYCSAGLVDESEE 578
>gi|224054827|ref|XP_002298371.1| predicted protein [Populus trichocarpa]
gi|222845629|gb|EEE83176.1| predicted protein [Populus trichocarpa]
Length = 915
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 64/304 (21%), Positives = 127/304 (41%), Gaps = 18/304 (5%)
Query: 447 LQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQ 506
+ P E Y +++ + G T + L + ++ L D +I+ S G + +
Sbjct: 537 MMPNEVTYNVMIEGHCKEGNTVKAFELLNQMVQKGL--VPDTYTYRPLISSLCSTGRVCE 594
Query: 507 AHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQ 566
A +D++H + + Y++LL Y + R R+ + R+ G+ +D CY L+
Sbjct: 595 AKKFIDDLHREHFKLNEMCYSALLHGYCKEGRLRDALGVCREMVKRGVDMDLVCYAVLID 654
Query: 567 SKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKL--LQEVKEGQ 624
I ++DT L K M + ++ R + ++ G ++ AG + K + ++ +
Sbjct: 655 GTIKEQDTSAVFGLLKNMHDQRL-RPDKVIYTSMIDGYSK---AGSVKKAFGIWDIMIDE 710
Query: 625 RIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTE 684
+ + +I+ CK LM AE K M PN T+ + + A G +
Sbjct: 711 GCTPNIVTYTTLINELCKAGLMDKAELLWKEMLVSNSTPNHVTYCCFLD-HLAREGSMEK 769
Query: 685 VTELWGEMKS--FASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFIDKYK 742
+L +M A++ S N ++ F + G A +++ M + +F D
Sbjct: 770 AVQLHNDMLKGLLANTVSYNI-------LVRGFCKLGRVEEATKLLDEMIDNAIFPDCIT 822
Query: 743 YRTL 746
Y T+
Sbjct: 823 YSTI 826
Score = 48.9 bits (115), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 54/250 (21%), Positives = 97/250 (38%), Gaps = 14/250 (5%)
Query: 436 QVELITTEHG--ILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVS---HDDAA 490
+ EL+ E G L + Y L+ +F GK HFL K ++++ ++
Sbjct: 384 EAELLFKEMGEKGLCANDVTYSILIDSFCRRGKLDTAIHFLGKMIMAGIKITVYPYNSLI 443
Query: 491 LGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDAR 550
GH LG L A DEM G++ + Y SL+ Y + E L +
Sbjct: 444 NGHC-----KLGNLSAAVSFFDEMIDKGLKPTVVSYTSLISGYCNKGKLHEAFRLYHEMT 498
Query: 551 SAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKG-CAQNHE 609
GI + + L+ + A LF EM E + + ++++G C + +
Sbjct: 499 GKGIAPNTYTFTTLISALFRANRMTDAFRLFDEMLEQNM-MPNEVTYNVMIEGHCKEGNT 557
Query: 610 AGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFH 669
L Q V++G D + + +I C + +A+K + + N +
Sbjct: 558 VKAFELLNQMVQKGLVPD--TYTYRPLISSLCSTGRVCEAKKFIDDLHREHFKLNEMCYS 615
Query: 670 SMVTGYAAIG 679
+++ GY G
Sbjct: 616 ALLHGYCKEG 625
Score = 45.8 bits (107), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 50/259 (19%), Positives = 108/259 (41%), Gaps = 7/259 (2%)
Query: 488 DAALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLR 547
+AAL ++ G + A DL++ + G S VY +L+ + + + E L +
Sbjct: 331 EAALSSLVEGLRRKGKVVDAFDLVNRVKKVGAMPSLFVYNALINSLCKDGKFDEAELLFK 390
Query: 548 DARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQN 607
+ G+ + Y L+ S + A+H +M + I + + ++ C
Sbjct: 391 EMGEKGLCANDVTYSILIDSFCRRGKLDTAIHFLGKMIMAGIKITVYPYNSLINGHCKLG 450
Query: 608 HEAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQT 667
+ + ++ + + +G + V + ++I +C K + +A + M G PN T
Sbjct: 451 NLSAAVSFFDEMIDKGLKPT--VVSYTSLISGYCNKGKLHEAFRLYHEMTGKGIAPNTYT 508
Query: 668 FHSMVTGYAAIGGKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEV 727
F ++++ + T+ L+ EM +M +E + ++ + G +A E+
Sbjct: 509 FTTLISALFR-ANRMTDAFRLFDEM----LEQNMMPNEVTYNVMIEGHCKEGNTVKAFEL 563
Query: 728 VAMMEEGKMFIDKYKYRTL 746
+ M + + D Y YR L
Sbjct: 564 LNQMVQKGLVPDTYTYRPL 582
>gi|145517919|ref|XP_001444837.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124412270|emb|CAK77440.1| unnamed protein product [Paramecium tetraurelia]
Length = 981
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 104/228 (45%), Gaps = 9/228 (3%)
Query: 506 QAHDLLDEMHLAG-VRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEAL 564
+A LL+++ G + +Y SL+ A ++ N ++ L R+ ++ I+ + Y L
Sbjct: 521 RAITLLEQIQETGQFKPDEILYNSLIDACVKFNEIQKGMELFREMKNKQIEPSSVTYGIL 580
Query: 565 LQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQ 624
+++ Q D GA +F+EMK+ KIP + + LV C +N + + ++K Q
Sbjct: 581 IKAYGKQNDLNGAFKIFEEMKQKKIPINDV-TYGCLVDACVRNDRLDQALQFIDQMK-SQ 638
Query: 625 RIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMR-SLGHLPNAQTFHSMVTGYAAIGGKYT 683
+ + +I FCK ++A K M+ S PN T++S++ G G
Sbjct: 639 NLPINTVLYTTIIKGFCKLNQTEEAIKYFDLMKQSPKTYPNLITYNSLLDGMVK-NGLLN 697
Query: 684 EVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMM 731
+ +L+ E+ + + D ++L R G R NE V +M
Sbjct: 698 QADKLFQEL----VDSKIKPDLITFSTLLKGHCRKGNMKRLNETVQIM 741
Score = 47.4 bits (111), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 44/185 (23%), Positives = 83/185 (44%), Gaps = 16/185 (8%)
Query: 421 EVKRVLQTLLGMLQKQVELITTEHGILQPTEKIYIKLVKAFLEAGKTKELT-HFLIKAEK 479
E+++ ++ M KQ+E + +GIL +KA+ GK +L F I E
Sbjct: 554 EIQKGMELFREMKNKQIEPSSVTYGIL----------IKAY---GKQNDLNGAFKIFEEM 600
Query: 480 ENLQVSHDDAALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRP 539
+ ++ +D G ++ C+ LDQA +D+M + ++ +Y +++K + + N+
Sbjct: 601 KQKKIPINDVTYGCLVDACVRNDRLDQALQFIDQMKSQNLPINTVLYTTIIKGFCKLNQT 660
Query: 540 REVTALLRDAR-SAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFE 598
E + S + Y +LL + A LF+E+ +SKI + F
Sbjct: 661 EEAIKYFDLMKQSPKTYPNLITYNSLLDGMVKNGLLNQADKLFQELVDSKI-KPDLITFS 719
Query: 599 MLVKG 603
L+KG
Sbjct: 720 TLLKG 724
Score = 40.0 bits (92), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 58/312 (18%), Positives = 115/312 (36%), Gaps = 12/312 (3%)
Query: 447 LQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQ 506
L PT+ + KL+ + E+ +L+ ++ ++ + +I ++
Sbjct: 281 LHPTDIFFNKLIDYAFRKSQV-EMAEYLLVFMRDQAKIQPTIVTINTMIDQYFKNNQREK 339
Query: 507 AHDLLDEMHLAGVRASSSVYASLLKAYIEA-NRPREVTALLRDARSAGIQLDASCYEALL 565
A + + L + + Y +L+ + N ++ L + Q D Y LL
Sbjct: 340 AWKTFENLKLTQTKPDNFTYTTLINGLKNSDNMDLKLAFSLFEEYKQYNQPDQIIYNCLL 399
Query: 566 QSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVK---- 621
+ I D L EMK+S+ + + L+KGC + L +E+K
Sbjct: 400 DACINAGDLNRGFQLLNEMKQSQTIQLDEITYNTLIKGCGRKKRLNDALNLFEEMKLIGI 459
Query: 622 EGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMR-SLGHLPNAQTFHSMVTGYAAIGG 680
+ RI +N+++ K M A + + MR G P+ T+ +V G
Sbjct: 460 KPNRI-----SFNSLLDSCVKCNKMNIAWRYFEEMRKQYGIFPDNFTYSILVNGIKTNHS 514
Query: 681 KYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFIDK 740
E+ ++ + DE L +S++ V+ + E+ M+ ++
Sbjct: 515 NRDELLRAITLLEQIQETGQFKPDEILYNSLIDACVKFNEIQKGMELFREMKNKQIEPSS 574
Query: 741 YKYRTLFLKYHK 752
Y L Y K
Sbjct: 575 VTYGILIKAYGK 586
>gi|414887392|tpg|DAA63406.1| TPA: hypothetical protein ZEAMMB73_124662 [Zea mays]
Length = 795
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 80/350 (22%), Positives = 138/350 (39%), Gaps = 41/350 (11%)
Query: 445 GILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWL 504
G +QP Y + A+ + + L+ + KE+ + D +I+ C G
Sbjct: 213 GGVQPALVTYNVVFHAYSKMSVPWKEVVALVDSMKED-GIERDRYTYNTLISCCRRRGLH 271
Query: 505 DQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEAL 564
+A + DEM AG + SLL Y +A + E +L+ +AG Y +L
Sbjct: 272 REAAQVFDEMKAAGFEPDKVTFNSLLDVYGKARKHEEAIGVLKRMENAGCTPSVVTYNSL 331
Query: 565 LQSKIVQKDTPGALHLFKEM--------------------KESKIPRSGHQEFEMLVKGC 604
+ + + AL L +EM + KI + EM+ GC
Sbjct: 332 ISAYVKDGLLEEALELKQEMEFRGMKPDVVTYTTLISGLDRVGKIDAALATYSEMVRNGC 391
Query: 605 AQN---HEA-----GLMAKL--LQEVKEGQRIDCGVHD---WNNVIHFFCKKRLMQDAEK 651
+ N + A G+ K + V + R V D WN ++ F + L +
Sbjct: 392 SPNLCTYNALIKLHGVRGKFTEMMAVFDDLRSAGYVPDVVTWNTLLSVFGQNGLDSEVSG 451
Query: 652 ALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEMKSFASSTSMNFDEELLDSV 711
K M+ G++P T+ S+++ Y+ G + + E++ M + D ++V
Sbjct: 452 VFKEMKKAGYIPERDTYVSLISSYSRC-GLFDQAMEIYKRM----IEAGIYPDISTYNAV 506
Query: 712 LYTFVRGGFFARANEVVAMMEEGKMFIDKYKYRTLFLKY--HKTLYKGKT 759
L RGG + +A ++ A M + D+ Y +L Y K L K KT
Sbjct: 507 LSALARGGRWEQAEKLFAEMVDRDCKPDELSYSSLLHAYANAKKLDKMKT 556
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 93/216 (43%), Gaps = 16/216 (7%)
Query: 486 HDDAALGHVITLCISL------GWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRP 539
H D AL H L ++ G L +A +L+ A +S Y +L+ A+ A R
Sbjct: 145 HGDRALHHPRVLPTAIRVFARAGCLAEASAILE----AAPAPDASAYTALVSAFSRAGRF 200
Query: 540 REVTALLRDARSAGIQLDASCYEALLQSKIVQKDTP--GALHLFKEMKESKIPRSGHQEF 597
R+ A+ + G+Q Y + + + P + L MKE I R + +
Sbjct: 201 RDAVAVFQRMVDGGVQPALVTYNVVFHA-YSKMSVPWKEVVALVDSMKEDGIERDRYT-Y 258
Query: 598 EMLVKGCAQNHEAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMR 657
L+ C + A++ E+K + +N+++ + K R ++A LKRM
Sbjct: 259 NTLISCCRRRGLHREAAQVFDEMKAAG-FEPDKVTFNSLLDVYGKARKHEEAIGVLKRME 317
Query: 658 SLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEMK 693
+ G P+ T++S+++ Y G E EL EM+
Sbjct: 318 NAGCTPSVVTYNSLISAYVK-DGLLEEALELKQEME 352
Score = 47.0 bits (110), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 116/552 (21%), Positives = 203/552 (36%), Gaps = 86/552 (15%)
Query: 259 ALAGCLLFETTRKAEQLLDIMPRIGVKADSNLLIIMAHIYERNGR-REELRKLQRHIDEA 317
A AGCL +A +L+ P D++ + + R GR R+ + QR +D
Sbjct: 164 ARAGCLA-----EASAILEAAP----APDASAYTALVSAFSRAGRFRDAVAVFQRMVDGG 214
Query: 318 VNLSDIQF--------------------------------RQFYNCLLSCHLKFGDLNSA 345
V + + + R YN L+SC + G A
Sbjct: 215 VQPALVTYNVVFHAYSKMSVPWKEVVALVDSMKEDGIERDRYTYNTLISCCRRRGLHREA 274
Query: 346 SKMVLEM----LQRAKEARNSL----AAAMLPFNAVGVNNRTPSEQNVNCTNSVDLENS- 396
+++ EM + K NSL A A+GV R +N CT SV NS
Sbjct: 275 AQVFDEMKAAGFEPDKVTFNSLLDVYGKARKHEEAIGVLKRM---ENAGCTPSVVTYNSL 331
Query: 397 -------GIIENHILSYEDFTKDRKFVALEAEVKRVLQTLLGMLQK----QVELITTEHG 445
G++E + + ++ +F ++ +V TL+ L + L T
Sbjct: 332 ISAYVKDGLLEEAL----ELKQEMEFRGMKPDVV-TYTTLISGLDRVGKIDAALATYSEM 386
Query: 446 I---LQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLG 502
+ P Y L+K GK E+ + + + D ++++ G
Sbjct: 387 VRNGCSPNLCTYNALIKLHGVRGKFTEM--MAVFDDLRSAGYVPDVVTWNTLLSVFGQNG 444
Query: 503 WLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYE 562
+ + EM AG Y SL+ +Y + + + AGI D S Y
Sbjct: 445 LDSEVSGVFKEMKKAGYIPERDTYVSLISSYSRCGLFDQAMEIYKRMIEAGIYPDISTYN 504
Query: 563 ALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKE 622
A+L + A LF EM + + + L+ A + M K L E
Sbjct: 505 AVLSALARGGRWEQAEKLFAEMVDRDC-KPDELSYSSLLHAYANAKKLDKM-KTLSEDIY 562
Query: 623 GQRIDCGVHDW--NNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGG 680
+RI+ H+W ++ K + + EKA + +R + ++MV+ Y G
Sbjct: 563 AERIE--RHNWLVKTLVLVNNKVNNLPETEKAFQELRRRRCSLDINVLNAMVSIY----G 616
Query: 681 KYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFIDK 740
K V ++ E+ S S+N +S+++ + R G + ++ ++ M D+
Sbjct: 617 KNKMVKKVE-EVLSLMMENSINHSAATYNSLMHMYSRLGDCEKCESILTEIKSSGMRPDR 675
Query: 741 YKYRTLFLKYHK 752
Y Y T+ Y +
Sbjct: 676 YSYNTVIYAYGR 687
Score = 45.8 bits (107), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 101/506 (19%), Positives = 193/506 (38%), Gaps = 52/506 (10%)
Query: 255 TFNIALAGCLLFETTRKAEQLLDIMPRIGVKADSNLLIIMAHIYERNGRREELRKLQRHI 314
T+N ++ C R+A Q+ D M G + D + +Y + + EE + + +
Sbjct: 257 TYNTLISCCRRRGLHREAAQVFDEMKAAGFEPDKVTFNSLLDVYGKARKHEEAIGVLKRM 316
Query: 315 DEAVNLSDIQFRQFYNCLLSCHLKFGDLNSASKMVLEMLQRAKEARNSLAAAMLPFNAVG 374
+ A + YN L+S ++K G L A ++ EM R M P
Sbjct: 317 ENAGCTPSVVT---YNSLISAYVKDGLLEEALELKQEMEFRG----------MKP----- 358
Query: 375 VNNRTPSEQNVNCTNSVD-LENSGIIENHILSYEDFTKDRKFVALEAEVKRVLQTLLGML 433
V T + L+ G I+ + +Y + R + L L G+
Sbjct: 359 --------DVVTYTTLISGLDRVGKIDAALATYSEMV--RNGCSPNLCTYNALIKLHGVR 408
Query: 434 QKQVELITTEHGILQ----PTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDA 489
K E++ + P + L+ F + G E++ + +K D
Sbjct: 409 GKFTEMMAVFDDLRSAGYVPDVVTWNTLLSVFGQNGLDSEVSGVFKEMKKAGYIPERDTY 468
Query: 490 ALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDA 549
+I+ G DQA ++ M AG+ S Y ++L A R + L +
Sbjct: 469 V--SLISSYSRCGLFDQAMEIYKRMIEAGIYPDISTYNAVLSALARGGRWEQAEKLFAEM 526
Query: 550 RSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCA-QNH 608
+ D Y +LL + K L +++ +I R LVK N+
Sbjct: 527 VDRDCKPDELSYSSLLHAYANAKKLDKMKTLSEDIYAERIER-----HNWLVKTLVLVNN 581
Query: 609 EAGLMAKLLQEVKEGQRIDCG--VHDWNNVIHFFCKKRLMQDAEKALKRM--RSLGHLPN 664
+ + + + +E +R C ++ N ++ + K ++++ E+ L M S+ H +
Sbjct: 582 KVNNLPETEKAFQELRRRRCSLDINVLNAMVSIYGKNKMVKKVEEVLSLMMENSINH--S 639
Query: 665 AQTFHSMVTGYAAIGGKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARA 724
A T++S++ Y+ + G + + E+K S+ M D ++V+Y + R G A
Sbjct: 640 AATYNSLMHMYSRL-GDCEKCESILTEIK----SSGMRPDRYSYNTVIYAYGRKGQMKEA 694
Query: 725 NEVVAMMEEGKMFIDKYKYRTLFLKY 750
+ + + M+ + D Y Y
Sbjct: 695 SRLFSEMKCSGVKPDIVTYNIFIKSY 720
>gi|218194637|gb|EEC77064.1| hypothetical protein OsI_15455 [Oryza sativa Indica Group]
Length = 864
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/258 (20%), Positives = 110/258 (42%), Gaps = 12/258 (4%)
Query: 428 TLLGMLQKQVELI--TTEHGILQPTEKIYIKLVKAFLEAGKTKE----LTHFLIKAEKEN 481
++ GM + V + + G++ PT + A + G+T E ++K K +
Sbjct: 306 SISGMWNESVRVFKQMSSCGVI-PTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPD 364
Query: 482 LQVSHDDAALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPRE 541
+ +S+ G+ + L H++ + M G+ + V+ L+ AY +
Sbjct: 365 I-ISYSTMLHGYATA---TDSCLADVHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDK 420
Query: 542 VTALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLV 601
+ D ++ G+ D + ++ S ALH F M + +P S + L+
Sbjct: 421 AMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPS-EAVYGCLI 479
Query: 602 KGCAQNHEAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGH 661
+GC + E +L+ E+ GV ++++I+ CK+ + + + + M G
Sbjct: 480 QGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQ 539
Query: 662 LPNAQTFHSMVTGYAAIG 679
PN TF+S++ GY +G
Sbjct: 540 RPNVVTFNSLMEGYCLVG 557
Score = 63.9 bits (154), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 65/314 (20%), Positives = 135/314 (42%), Gaps = 17/314 (5%)
Query: 431 GMLQKQVELIT--TEHGILQPTEKIYIKLVKAFLEAGKT---KELTHFLIKAEKENLQVS 485
G L K ELI+ I P K + ++ + G+ K++ +++ + V+
Sbjct: 486 GELVKAKELISEMMNKDIPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVT 545
Query: 486 HDDAALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTAL 545
+ G+ + +G +++A LLD M G+ + +Y +L+ Y + R + +
Sbjct: 546 FNSLMEGYCL-----VGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTV 600
Query: 546 LRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCA 605
RD G++ + Y +L + T A +F EM ES S H + +++ G
Sbjct: 601 FRDMLHKGVKPTSVLYSIILHGLFQARRTTAAKKMFHEMIESGTTVSIHT-YGVVLGGLC 659
Query: 606 QNHEAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNA 665
+N+ A +L E + + +N VI K Q+A++ + + G +PN
Sbjct: 660 RNNCTD-EANMLLEKLFAMNVKFDIITFNIVISAMFKVGRRQEAKELFDAISTYGLVPNI 718
Query: 666 QTFHSMVTGYAAIGGKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARAN 725
QT+ M+T Y E L+ ++ ++ D LL+ ++ + A+A+
Sbjct: 719 QTYSMMITNLIK-EESYEEADNLFISVEKSGHAS----DSRLLNHIVRMLLNKAEVAKAS 773
Query: 726 EVVAMMEEGKMFID 739
++++ E + ++
Sbjct: 774 NYLSIIGENNLTLE 787
Score = 43.5 bits (101), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 42/174 (24%), Positives = 79/174 (45%), Gaps = 14/174 (8%)
Query: 526 YASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMK 585
Y L+ Y +RP A++ G+ D Y +L+ + + A LF EM
Sbjct: 159 YNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSY-SLIYGFVKDGEVDKAHCLFLEMM 217
Query: 586 ESKI-PRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRIDCGV----HDWNNVIHFF 640
E + P+ ++K + E ++Q++ +D G+ ++ +I
Sbjct: 218 EQGVLPKI--LICNSIIKELCKMKEMDKAESIVQKM-----VDSGIAPDLFTYSLIIDGL 270
Query: 641 CKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEMKS 694
CK + M AE+ L++M G PN+ T++S++ GY +I G + E ++ +M S
Sbjct: 271 CKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGY-SISGMWNESVRVFKQMSS 323
>gi|222628664|gb|EEE60796.1| hypothetical protein OsJ_14385 [Oryza sativa Japonica Group]
Length = 808
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/235 (21%), Positives = 99/235 (42%), Gaps = 9/235 (3%)
Query: 449 PTEKIYIKLVKAFLEAGKTKE----LTHFLIKAEKENLQVSHDDAALGHVITLCISLGWL 504
PT + A + G+T E ++K K ++ +S+ G+ + L
Sbjct: 272 PTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDI-ISYSTMLHGYATA---TDSCL 327
Query: 505 DQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEAL 564
H++ + M G+ + V+ L+ AY + + D ++ G+ D + +
Sbjct: 328 ADVHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATV 387
Query: 565 LQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQ 624
+ S ALH F M + +P S + L++GC + E +L+ E+
Sbjct: 388 ISSLCRIGRLDDALHKFNHMVDIGVPPS-EAVYGCLIQGCCNHGELVKAKELISEMMNKD 446
Query: 625 RIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIG 679
GV ++++I+ CK+ + + + + M G PN TF+S++ GY +G
Sbjct: 447 IPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVG 501
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 65/314 (20%), Positives = 135/314 (42%), Gaps = 17/314 (5%)
Query: 431 GMLQKQVELIT--TEHGILQPTEKIYIKLVKAFLEAGKT---KELTHFLIKAEKENLQVS 485
G L K ELI+ I P K + ++ + G+ K++ +++ + V+
Sbjct: 430 GELVKAKELISEMMNKDIPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVT 489
Query: 486 HDDAALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTAL 545
+ G+ + +G +++A LLD M G+ + +Y +L+ Y + R + +
Sbjct: 490 FNSLMEGYCL-----VGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTV 544
Query: 546 LRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCA 605
RD G++ + Y +L + T A +F EM ES S H + +++ G
Sbjct: 545 FRDMLHKGVKPTSVLYSIILHGLFQARRTTAAKKMFHEMIESGTTVSIHT-YGVVLGGLC 603
Query: 606 QNHEAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNA 665
+N+ A +L E + + +N VI K Q+A++ + + G +PN
Sbjct: 604 RNNCTD-EANMLLEKLFAMNVKFDIITFNIVISAMFKVGRRQEAKELFDAISTYGLVPNI 662
Query: 666 QTFHSMVTGYAAIGGKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARAN 725
QT+ M+T Y E L+ ++ ++ D LL+ ++ + A+A+
Sbjct: 663 QTYSMMITNLIK-EESYEEADNLFISVEKSGHAS----DSRLLNHIVRMLLNKAEVAKAS 717
Query: 726 EVVAMMEEGKMFID 739
++++ E + ++
Sbjct: 718 NYLSIIGENNLTLE 731
Score = 43.9 bits (102), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 42/174 (24%), Positives = 79/174 (45%), Gaps = 14/174 (8%)
Query: 526 YASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMK 585
Y L+ Y +RP A++ G+ D Y +L+ + + A LF EM
Sbjct: 103 YNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSY-SLIYGFVKDGEVDKAHCLFLEMM 161
Query: 586 ESKI-PRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRIDCGV----HDWNNVIHFF 640
E + P+ ++K + E ++Q++ +D G+ ++ +I
Sbjct: 162 EQGVLPKI--LICNSIIKELCKMKEMDKAESIVQKM-----VDSGIAPDLFTYSLIIDGL 214
Query: 641 CKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEMKS 694
CK + M AE+ L++M G PN+ T++S++ GY +I G + E ++ +M S
Sbjct: 215 CKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGY-SISGMWNESVRVFKQMSS 267
>gi|356517404|ref|XP_003527377.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
mitochondrial-like [Glycine max]
Length = 696
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/256 (22%), Positives = 119/256 (46%), Gaps = 7/256 (2%)
Query: 448 QPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQA 507
+P + Y L+K +++ G K+ F++ +E E V D+ +I G + A
Sbjct: 324 EPRTRAYNALLKGYVKTGSLKD-AEFVV-SEMEKAGVKPDEQTYSLLIDAYAHAGRWESA 381
Query: 508 HDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQS 567
+L EM + V +S VY+ +L +Y + ++ +L+D +S G+Q D Y ++ +
Sbjct: 382 RIVLKEMEASNVEPNSYVYSRILASYRDKGEWQKSFQVLKDMKSNGVQPDRHFYNVMIDT 441
Query: 568 KIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRID 627
A+ F+ M I R + L+ ++ + +L E+++
Sbjct: 442 FGKYNCLDHAMATFERMLSEGI-RPDTVTWNTLINCHCKSGRHNMAEELFGEMQQRGYSP 500
Query: 628 CGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTE 687
C + +N +I+ +++ + L +M+S G LPN+ T+ ++V Y G++++ E
Sbjct: 501 C-ITTYNIMINSMGEQQRWEQVSLFLSKMQSQGLLPNSITYTTLVDVYGK-SGRFSDAIE 558
Query: 688 LWGEMKS--FASSTSM 701
+KS F +++M
Sbjct: 559 CLEVLKSTGFKPTSTM 574
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 58/252 (23%), Positives = 107/252 (42%), Gaps = 15/252 (5%)
Query: 450 TEKIYIK------LVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGW 503
T+KI I ++ F +AG FL A+ L + + L VI + G
Sbjct: 250 TDKIEIDGHLMNDIILGFSKAGDPTRAMRFLAMAQSNGL--NPKPSTLVAVILALGNSGR 307
Query: 504 LDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEA 563
+A L +E+ G + Y +LLK Y++ ++ ++ + AG++ D Y
Sbjct: 308 THEAEALFEEIRENGSEPRTRAYNALLKGYVKTGSLKDAEFVVSEMEKAGVKPDEQTYSL 367
Query: 564 LLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKE- 622
L+ + A + KEM+ S + + + +L A + G K Q +K+
Sbjct: 368 LIDAYAHAGRWESARIVLKEMEASNVEPNSYVYSRIL----ASYRDKGEWQKSFQVLKDM 423
Query: 623 -GQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGK 681
+ H +N +I F K + A +RM S G P+ T+++++ + G+
Sbjct: 424 KSNGVQPDRHFYNVMIDTFGKYNCLDHAMATFERMLSEGIRPDTVTWNTLINCHCK-SGR 482
Query: 682 YTEVTELWGEMK 693
+ EL+GEM+
Sbjct: 483 HNMAEELFGEMQ 494
>gi|225434476|ref|XP_002278184.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09060
[Vitis vinifera]
Length = 691
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 69/345 (20%), Positives = 137/345 (39%), Gaps = 25/345 (7%)
Query: 432 MLQKQVELITTEHGIL--QPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDA 489
M + +++ H I QP + Y L+ A +E+ K E F + E + +S +
Sbjct: 93 MPDQALDIFQRMHEIFGCQPGIRSYNSLLNALIESNKWDEAESFFLYFE--TMGLSPNLQ 150
Query: 490 ALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDA 549
+I + D+A +LL+ M G Y +L+ + + + L +
Sbjct: 151 TYNILIKISCRKKQFDKAKELLNWMWEQGFSPDVFSYGTLINSLAKNGYMSDALKLFDEM 210
Query: 550 RSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKG---CAQ 606
G+ D +CY L+ + D A +++ + + + +++ G C +
Sbjct: 211 PERGVTPDVACYNILIDGFFKKGDILNASEIWERLLKGPSVYPNIPSYNVMINGLCKCGK 270
Query: 607 NHEAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQ 666
E+ + +++ + GQ + + ++ +IH C + A + K M G P+
Sbjct: 271 FDESFEIWHRMKKNERGQDL----YTYSTLIHGLCGSGNLDGATRVYKEMAENGVSPDVV 326
Query: 667 TFHSMVTGYAAIGGKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGF-FARAN 725
+++M+ GY G+ E ELW M+ T ++++ +RG F A+ +
Sbjct: 327 VYNTMLNGYLR-AGRIEECLELWKVMEKEGCRTVVSYN---------ILIRGLFENAKVD 376
Query: 726 EVVAMME---EGKMFIDKYKYRTLFLKYHKTLYKGKTPKFQTEAQ 767
E +++ E E D Y L K Y K EA+
Sbjct: 377 EAISIWELLPEKDCCADSMTYGVLVHGLCKNGYLNKALSILEEAE 421
Score = 49.3 bits (116), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 46/223 (20%), Positives = 93/223 (41%), Gaps = 5/223 (2%)
Query: 475 IKAEKENLQVSHDDAALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYI 534
I E EN + D A +I G LD+ +LD+M G + + V +++ ++
Sbjct: 416 ILEEAENGRGDLDTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPHVCNAVINGFV 475
Query: 535 EANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGH 594
A++ + + S G Y L+ + A L KEM K +
Sbjct: 476 RASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLH-KGWKPNM 534
Query: 595 QEFEMLVKGCAQNHEAGLMAKL-LQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKAL 653
+ +L+ G Q + + L Q +++G + D +H N +IH C ++DA +
Sbjct: 535 ITYSLLMNGLCQGKKLDMALNLWCQALEKGFKPDVKMH--NIIIHGLCSSGKVEDALQLY 592
Query: 654 KRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEMKSFA 696
M+ +PN T ++++ G+ + + +++W + +
Sbjct: 593 SEMKQRKCVPNLVTHNTLMEGFYKV-RDFERASKIWDHILQYG 634
>gi|147833070|emb|CAN77584.1| hypothetical protein VITISV_034996 [Vitis vinifera]
Length = 913
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 73/363 (20%), Positives = 142/363 (39%), Gaps = 28/363 (7%)
Query: 412 DRKFVALEAEVKRVLQTLLGMLQKQVELITTEHGILQPTEKIYIKLVKAFLEAGKTKELT 471
D K VA + L + Q+ E+ + GI + Y L+ A +E+ K E
Sbjct: 55 DPKLVAHAYAKNSMPDQALDIFQRMHEIFGCQPGI-----RSYNSLLNALIESNKWDEAE 109
Query: 472 HFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLK 531
F + E + +S + +I + D+A +LL+ M G Y +L+
Sbjct: 110 SFFLYFE--TMGLSPNLQTYNILIKISCRKKQFDKAKELLNWMWGQGFSPDVFSYGTLIN 167
Query: 532 AYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPR 591
+ + + L + G+ D +CY L+ + D A +++ + +
Sbjct: 168 SLAKNGYMSDALKLFDEMPERGVTPDVACYNILIDGFFKKGDILNASEIWERLLKGPSVY 227
Query: 592 SGHQEFEMLVKG---CAQNHEAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQD 648
+ +++ G C + E+ + +++ + GQ + + ++ +IH C +
Sbjct: 228 PNIPSYNVMINGLCKCGKFDESFEIWHRMKKNERGQDL----YTYSTLIHGLCGSGNLDG 283
Query: 649 AEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEMKSFASSTSMNFDEELL 708
A + K M G P+ +++M+ GY G+ E ELW M+ T ++++
Sbjct: 284 ATRVYKEMAENGVSPDVVVYNTMLNGYLR-AGRIEECLELWKVMEKEGCRTVVSYN---- 338
Query: 709 DSVLYTFVRGGF-FARANEVVAMME---EGKMFIDKYKYRTLFLKYHKTLYKGKTPKFQT 764
+RG F A+ +E +++ E E D Y L K Y K
Sbjct: 339 -----ILIRGLFENAKVDEAISIWELLPEKDCCADSMTYGVLVHGLCKNGYLNKALSILE 393
Query: 765 EAQ 767
EA+
Sbjct: 394 EAE 396
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/223 (20%), Positives = 94/223 (42%), Gaps = 5/223 (2%)
Query: 475 IKAEKENLQVSHDDAALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYI 534
I E EN + D A +I G LD+ +LD+M G + + V +++ ++
Sbjct: 391 ILEEAENGRGDLDTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPYVCNAVINGFV 450
Query: 535 EANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGH 594
A++ + + S G Y L+ + A L KEM + K +
Sbjct: 451 RASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLQ-KGWKPNM 509
Query: 595 QEFEMLVKGCAQNHEAGLMAKL-LQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKAL 653
+ +L+ G Q + + L Q +++G + D +H N +IH C ++DA +
Sbjct: 510 ITYSLLMNGLCQGKKLDMALNLWCQALEKGFKPDVKMH--NIIIHGLCSSGKVEDALQLY 567
Query: 654 KRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEMKSFA 696
M+ +PN T ++++ G+ + + +++W + +
Sbjct: 568 SEMKQRNCVPNLVTHNTLMEGFYKV-RDFERASKIWDHILQYG 609
>gi|32489931|emb|CAE05523.1| OSJNBa0038P21.16 [Oryza sativa Japonica Group]
gi|38347491|emb|CAE05839.2| OSJNBa0091C07.1 [Oryza sativa Japonica Group]
Length = 844
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/258 (20%), Positives = 110/258 (42%), Gaps = 12/258 (4%)
Query: 428 TLLGMLQKQVELI--TTEHGILQPTEKIYIKLVKAFLEAGKTKE----LTHFLIKAEKEN 481
++ GM + V + + G++ PT + A + G+T E ++K K +
Sbjct: 326 SISGMWNESVRVFKQMSSCGVI-PTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPD 384
Query: 482 LQVSHDDAALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPRE 541
+ +S+ G+ + L H++ + M G+ + V+ L+ AY +
Sbjct: 385 I-ISYSTMLHGYATA---TDSCLADVHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDK 440
Query: 542 VTALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLV 601
+ D ++ G+ D + ++ S ALH F M + +P S + L+
Sbjct: 441 AMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPS-EAVYGCLI 499
Query: 602 KGCAQNHEAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGH 661
+GC + E +L+ E+ GV ++++I+ CK+ + + + + M G
Sbjct: 500 QGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQ 559
Query: 662 LPNAQTFHSMVTGYAAIG 679
PN TF+S++ GY +G
Sbjct: 560 RPNVVTFNSLMEGYCLVG 577
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 65/314 (20%), Positives = 135/314 (42%), Gaps = 17/314 (5%)
Query: 431 GMLQKQVELIT--TEHGILQPTEKIYIKLVKAFLEAGKT---KELTHFLIKAEKENLQVS 485
G L K ELI+ I P K + ++ + G+ K++ +++ + V+
Sbjct: 506 GELVKAKELISEMMNKDIPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVT 565
Query: 486 HDDAALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTAL 545
+ G+ + +G +++A LLD M G+ + +Y +L+ Y + R + +
Sbjct: 566 FNSLMEGYCL-----VGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTV 620
Query: 546 LRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCA 605
RD G++ + Y +L + T A +F EM ES S H + +++ G
Sbjct: 621 FRDMLHKGVKPTSVLYSIILHGLFQARRTTAAKKMFHEMIESGTTVSIHT-YGVVLGGLC 679
Query: 606 QNHEAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNA 665
+N+ A +L E + + +N VI K Q+A++ + + G +PN
Sbjct: 680 RNNCTD-EANMLLEKLFAMNVKFDIITFNIVISAMFKVGRRQEAKELFDAISTYGLVPNI 738
Query: 666 QTFHSMVTGYAAIGGKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARAN 725
QT+ M+T Y E L+ ++ ++ D LL+ ++ + A+A+
Sbjct: 739 QTYSMMITNLIK-EESYEEADNLFISVEKSGHAS----DSRLLNHIVRMLLNKAEVAKAS 793
Query: 726 EVVAMMEEGKMFID 739
++++ E + ++
Sbjct: 794 NYLSIIGENNLTLE 807
Score = 43.5 bits (101), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 42/174 (24%), Positives = 79/174 (45%), Gaps = 14/174 (8%)
Query: 526 YASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMK 585
Y L+ Y +RP A++ G+ D Y +L+ + + A LF EM
Sbjct: 179 YNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSY-SLIYGFVKDGEVDKAHCLFLEMM 237
Query: 586 ESKI-PRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRIDCGV----HDWNNVIHFF 640
E + P+ ++K + E ++Q++ +D G+ ++ +I
Sbjct: 238 EQGVLPKI--LICNSIIKELCKMKEMDKAESIVQKM-----VDSGIAPDLFTYSLIIDGL 290
Query: 641 CKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEMKS 694
CK + M AE+ L++M G PN+ T++S++ GY +I G + E ++ +M S
Sbjct: 291 CKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGY-SISGMWNESVRVFKQMSS 343
>gi|302799689|ref|XP_002981603.1| hypothetical protein SELMODRAFT_114722 [Selaginella moellendorffii]
gi|300150769|gb|EFJ17418.1| hypothetical protein SELMODRAFT_114722 [Selaginella moellendorffii]
Length = 609
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/247 (23%), Positives = 108/247 (43%), Gaps = 8/247 (3%)
Query: 502 GWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCY 561
G +D+A +++ EM L GV +++L+ + A + E L ++ ++ +LDA
Sbjct: 95 GKMDRACEMVREMKLKGVEPDKFTFSALITGWCNARKVDEALKLYKEILTSSCRLDAVSS 154
Query: 562 EALLQSKIVQKDTPGALHLFK--EMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQE 619
AL+ ++ A LF+ EM+E + + L+ G ++ K+L
Sbjct: 155 SALITGLCRERRIGEAYELFQEMEMREDGAWKPDVVTYTALIDGFCKSGNLEKAMKMLG- 213
Query: 620 VKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIG 679
V EG++ V +++++H CK + A +RM S G +PN T+ +++ G A
Sbjct: 214 VMEGRKCVPNVVTYSSLLHGLCKAGDLDQALDLFRRMTSKGCVPNVVTYTTLIHGLCA-A 272
Query: 680 GKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFID 739
K L EM ++T D +++L + R G A ++ M D
Sbjct: 273 HKVDAARLLMDEM----TATCCPADTVSYNALLDGYCRLGRIEEAKQLFKEMAAKSCLPD 328
Query: 740 KYKYRTL 746
+ Y L
Sbjct: 329 RITYTCL 335
Score = 53.1 bits (126), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 54/236 (22%), Positives = 97/236 (41%), Gaps = 5/236 (2%)
Query: 447 LQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQ 506
+ P E+ Y +V +A T + + ++K ++ V+ D VI G +D+
Sbjct: 5 VAPNERTYNVVVNGLCKARLTSK-AYEVLKEMRDGKSVAPDLVTYSTVINGFCKQGEMDR 63
Query: 507 AHDLLDEM-HLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALL 565
A ++L EM G+ Y S++ + ++R+ + G++ D + AL+
Sbjct: 64 ACEILREMVTRDGMAPDVVTYTSVVDGLCRDGKMDRACEMVREMKLKGVEPDKFTFSALI 123
Query: 566 QSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQ--EVKEG 623
+ AL L+KE+ S R L+ G + G +L Q E++E
Sbjct: 124 TGWCNARKVDEALKLYKEILTSSC-RLDAVSSSALITGLCRERRIGEAYELFQEMEMRED 182
Query: 624 QRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIG 679
V + +I FCK ++ A K L M +PN T+ S++ G G
Sbjct: 183 GAWKPDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAG 238
Score = 42.4 bits (98), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 54/234 (23%), Positives = 106/234 (45%), Gaps = 14/234 (5%)
Query: 504 LDQAHDLLDEMHLA-GVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYE 562
L++A LL+ M A G+ Y+ ++ Y A R E +++ + + +A Y
Sbjct: 345 LEEARFLLENMKTAAGIDPDVVTYSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYS 404
Query: 563 ALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKE 622
+L+ A+ + K + + + + ++++G LL+E+
Sbjct: 405 SLIDGLCKAGRVNHAMEVLKNVDKPDV-----VTYTIVIEGLCGTDRTEEALTLLEEMV- 458
Query: 623 GQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKY 682
+R++ V +N+VI C+ M +A K L M + G P T+ +++ G++ G+
Sbjct: 459 NKRVEPSVGTFNSVIGALCRLGDMDEAWKLLVAMAAHGLEPGMVTYTTLLEGFSRT-GRM 517
Query: 683 TEVTELWGEMKSFA--SSTSMNFDEELLDSVLYTFVRGGFFARA-NEVVAMMEE 733
EL+ M+ A SS++ N E S L +RG AR ++ +A++EE
Sbjct: 518 EIAYELFEVMRRKAKKSSSAANLVPEQAFSAL---IRGLCKAREIDKAMAVVEE 568
>gi|356529971|ref|XP_003533559.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g19890-like [Glycine max]
Length = 693
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 67/278 (24%), Positives = 117/278 (42%), Gaps = 10/278 (3%)
Query: 457 LVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQAHDLLDEMHL 516
+VK+F E G+ KE +I+ + L S L V+ + +G ++ A +L DEM
Sbjct: 138 MVKSFAEIGRVKEAIEMVIEMHNQGLAPS--TKTLNWVVKIVTEMGLVEYAENLFDEMCA 195
Query: 517 AGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQKDTPG 576
GV+ + Y ++ Y + E L G +D + +++ +
Sbjct: 196 RGVQPNCVSYRVMVVGYCKLGNVLESDRWLGGMIERGFVVDNATLSLIVREFCEKGFVTR 255
Query: 577 ALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRIDCGVHDWNNV 636
AL F+ E + R F +++G + ++L+E+ G+ V+ +
Sbjct: 256 ALWYFRRFCEMGL-RPNLINFTCMIEGLCKRGSVKQAFEMLEEMV-GRGWKPNVYTHTAL 313
Query: 637 IHFFCKKRLMQDAEKA-LKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEMKSF 695
I CKK + A + LK +RS H PN T+ +M++GY K L MK
Sbjct: 314 IDGLCKKGWTEKAFRLFLKLVRSENHKPNVLTYTAMISGYCR-DEKMNRAEMLLSRMKEQ 372
Query: 696 ASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEE 733
+ + N L+D + G F RA E++ +M E
Sbjct: 373 GLAPNTNTYTTLIDG----HCKAGNFERAYELMNVMNE 406
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/178 (20%), Positives = 71/178 (39%), Gaps = 37/178 (20%)
Query: 502 GWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCY 561
G ++A++L++ M+ G + Y +++ + R +E +L+ G+ D Y
Sbjct: 392 GNFERAYELMNVMNEEGFSPNVCTYNAIVDGLCKKGRVQEAYKVLKSGFRNGLDADKVTY 451
Query: 562 EALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVK 621
L+ Q + AL LF +M VK
Sbjct: 452 TILISEHCKQAEIKQALVLFNKM-----------------------------------VK 476
Query: 622 EGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIG 679
G + D +H + +I FC+++ M+++E + G +P +T+ SM+ GY G
Sbjct: 477 SGIQPD--IHSYTTLIAVFCREKRMKESEMFFEEAVRFGLVPTNKTYTSMICGYCREG 532
>gi|302759535|ref|XP_002963190.1| hypothetical protein SELMODRAFT_79513 [Selaginella moellendorffii]
gi|300168458|gb|EFJ35061.1| hypothetical protein SELMODRAFT_79513 [Selaginella moellendorffii]
Length = 573
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 66/301 (21%), Positives = 125/301 (41%), Gaps = 8/301 (2%)
Query: 447 LQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQ 506
+ P E+ Y +V +A T + + ++K ++ V+ D VI G +D+
Sbjct: 37 VAPNERTYNVVVNGLCKARLTSK-AYEVLKEMRDGKSVAPDLVTYSTVINGFCKQGEMDR 95
Query: 507 AHDLLDEM-HLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALL 565
A ++L EM G+ Y S++ + ++R+ + G++ D + AL+
Sbjct: 96 ACEILREMVTRDGIAPDVVTYTSVVDGLCRDGKMDRACEMVREMKLKGVEPDKFTFSALI 155
Query: 566 QSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQR 625
+ AL L+KE+ S + + L+ G ++ K+L V EG++
Sbjct: 156 TGWCNARKVDEALKLYKEILTSSSWKPDVVTYTALIDGFCKSGNLEKAMKMLG-VMEGRK 214
Query: 626 IDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEV 685
V +++++H CK + A +RM S G +PN T+ +++ G A K
Sbjct: 215 CVPNVVTYSSLLHGLCKAGDLDQALDLFRRMTSKGCVPNVVTYTTLIHGLCA-AHKVDAA 273
Query: 686 TELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFIDKYKYRT 745
L EM ++T D +++L + R G A ++ M D+ Y
Sbjct: 274 RLLMDEM----TATCCPPDTVSYNALLDGYCRLGRIEEAKQLFKEMATKSCLPDRITYTC 329
Query: 746 L 746
L
Sbjct: 330 L 330
Score = 47.8 bits (112), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 43/219 (19%), Positives = 94/219 (42%), Gaps = 5/219 (2%)
Query: 529 LLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESK 588
++ + +AN+ ++ A R + + Y ++ + T A + KEM++ K
Sbjct: 13 IIDGFCKANQLKQALACFEKMREF-VAPNERTYNVVVNGLCKARLTSKAYEVLKEMRDGK 71
Query: 589 IPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQD 648
+ ++ G + E ++L+E+ I V + +V+ C+ M
Sbjct: 72 SVAPDLVTYSTVINGFCKQGEMDRACEILREMVTRDGIAPDVVTYTSVVDGLCRDGKMDR 131
Query: 649 AEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEMKSFASSTSMNFDEELL 708
A + ++ M+ G P+ TF +++TG+ K E +L+ K +S+S D
Sbjct: 132 ACEMVREMKLKGVEPDKFTFSALITGWCN-ARKVDEALKLY---KEILTSSSWKPDVVTY 187
Query: 709 DSVLYTFVRGGFFARANEVVAMMEEGKMFIDKYKYRTLF 747
+++ F + G +A +++ +ME K + Y +L
Sbjct: 188 TALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLL 226
Score = 46.6 bits (109), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 43/182 (23%), Positives = 79/182 (43%), Gaps = 7/182 (3%)
Query: 501 LGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSA-GIQLDAS 559
LG +++A L EM Y L++ + A+R E LL + ++A GI D
Sbjct: 302 LGRIEEAKQLFKEMATKSCLPDRITYTCLVRGFCNASRLEEARFLLENMKTAAGIDPDVV 361
Query: 560 CYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQE 619
Y ++ K A +EM + + + L+ G + AG + ++
Sbjct: 362 TYSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVT-YSSLIDGLCK---AGRVDHAMEV 417
Query: 620 VKE--GQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAA 677
+K +R++ V +N+VI C+ M +A K L M + G P T+ +++ G++
Sbjct: 418 LKNMVNKRVEPSVGTFNSVIGALCRLGDMDEAWKLLVAMAAHGLEPGMVTYTTLLEGFSR 477
Query: 678 IG 679
G
Sbjct: 478 TG 479
>gi|297745840|emb|CBI15896.3| unnamed protein product [Vitis vinifera]
Length = 650
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 69/345 (20%), Positives = 137/345 (39%), Gaps = 25/345 (7%)
Query: 432 MLQKQVELITTEHGIL--QPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDA 489
M + +++ H I QP + Y L+ A +E+ K E F + E + +S +
Sbjct: 93 MPDQALDIFQRMHEIFGCQPGIRSYNSLLNALIESNKWDEAESFFLYFE--TMGLSPNLQ 150
Query: 490 ALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDA 549
+I + D+A +LL+ M G Y +L+ + + + L +
Sbjct: 151 TYNILIKISCRKKQFDKAKELLNWMWEQGFSPDVFSYGTLINSLAKNGYMSDALKLFDEM 210
Query: 550 RSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKG---CAQ 606
G+ D +CY L+ + D A +++ + + + +++ G C +
Sbjct: 211 PERGVTPDVACYNILIDGFFKKGDILNASEIWERLLKGPSVYPNIPSYNVMINGLCKCGK 270
Query: 607 NHEAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQ 666
E+ + +++ + GQ + + ++ +IH C + A + K M G P+
Sbjct: 271 FDESFEIWHRMKKNERGQDL----YTYSTLIHGLCGSGNLDGATRVYKEMAENGVSPDVV 326
Query: 667 TFHSMVTGYAAIGGKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGF-FARAN 725
+++M+ GY G+ E ELW M+ T ++++ +RG F A+ +
Sbjct: 327 VYNTMLNGYLR-AGRIEECLELWKVMEKEGCRTVVSYN---------ILIRGLFENAKVD 376
Query: 726 EVVAMME---EGKMFIDKYKYRTLFLKYHKTLYKGKTPKFQTEAQ 767
E +++ E E D Y L K Y K EA+
Sbjct: 377 EAISIWELLPEKDCCADSMTYGVLVHGLCKNGYLNKALSILEEAE 421
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 49/227 (21%), Positives = 98/227 (43%), Gaps = 6/227 (2%)
Query: 475 IKAEKENLQVSHDDAALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYI 534
I E EN + D A +I G LD+ +LD+M G + + V +++ ++
Sbjct: 416 ILEEAENGRGDLDTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPHVCNAVINGFV 475
Query: 535 EANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGH 594
A++ + + S G Y L+ + A L KEM K +
Sbjct: 476 RASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLH-KGWKPNM 534
Query: 595 QEFEMLVKGCAQNHEAGLMAKL-LQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKAL 653
+ +L+ G Q + + L Q +++G + D +H N +IH C ++DA +
Sbjct: 535 ITYSLLMNGLCQGKKLDMALNLWCQALEKGFKPDVKMH--NIIIHGLCSSGKVEDALQLY 592
Query: 654 KRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGE-MKSFASST 699
M+ +PN T ++++ G+ + + +++W ++S++SS
Sbjct: 593 SEMKQRKCVPNLVTHNTLMEGFYKV-RDFERASKIWDHILQSWSSSN 638
>gi|356522073|ref|XP_003529674.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16390,
chloroplastic-like [Glycine max]
Length = 685
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/232 (21%), Positives = 100/232 (43%), Gaps = 3/232 (1%)
Query: 448 QPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQA 507
+P + Y ++ A+ AG +A E ++ D +I + G D
Sbjct: 229 EPDDVTYSAMIDAYGRAGNIDMALRLYDRARTEKWRL--DTVTFSTLIKMYGLAGNYDGC 286
Query: 508 HDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQS 567
++ EM + GV+ + +Y +LL A A RP + ++ + + G + Y +LL++
Sbjct: 287 LNVYQEMKVLGVKPNMVIYNTLLDAMGRAKRPWQAKSIYTEMTNNGFSPNWVTYASLLRA 346
Query: 568 KIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRID 627
+ + AL ++KEMKE + + H + L+ CA A ++ +++K
Sbjct: 347 YGRGRYSEDALFVYKEMKEKGMEMNTHL-YNTLLAMCADLGLANEAFEIFEDMKTSATCL 405
Query: 628 CGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIG 679
C ++++I + + +AE+ L M G P S+V Y +G
Sbjct: 406 CDSWTFSSLITIYSCTGNVSEAERMLNEMIESGSQPTIFVLTSLVQCYGKVG 457
Score = 44.7 bits (104), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 59/258 (22%), Positives = 105/258 (40%), Gaps = 22/258 (8%)
Query: 504 LDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEA 563
LD L DEM GVR + +++++ + P + S G + D Y A
Sbjct: 178 LDAMEKLFDEMLQRGVRPDNVTFSTIISCARICSLPNKAVEWFEKMSSFGCEPDDVTYSA 237
Query: 564 LLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVK--GCAQNHEAGLMAKLLQEVK 621
++ + + AL L+ + K R F L+K G A N++ L + QE+K
Sbjct: 238 MIDAYGRAGNIDMALRLYDRARTEKW-RLDTVTFSTLIKMYGLAGNYDGCL--NVYQEMK 294
Query: 622 E-GQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGG 680
G + + + +N ++ + + A+ M + G PN T+ S++ Y G
Sbjct: 295 VLGVKPNMVI--YNTLLDAMGRAKRPWQAKSIYTEMTNNGFSPNWVTYASLLRAYGR--G 350
Query: 681 KYTE-VTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKM--- 736
+Y+E ++ EMK M + L +++L G ANE + E+ K
Sbjct: 351 RYSEDALFVYKEMK----EKGMEMNTHLYNTLLAMCADLGL---ANEAFEIFEDMKTSAT 403
Query: 737 -FIDKYKYRTLFLKYHKT 753
D + + +L Y T
Sbjct: 404 CLCDSWTFSSLITIYSCT 421
>gi|224078588|ref|XP_002305565.1| predicted protein [Populus trichocarpa]
gi|222848529|gb|EEE86076.1| predicted protein [Populus trichocarpa]
Length = 757
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/253 (24%), Positives = 114/253 (45%), Gaps = 14/253 (5%)
Query: 497 LCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQL 556
LC LG +D+A +L++M ++ Y +++ + N+ E T L GI
Sbjct: 346 LC-KLGEVDEAVKVLNQMIERDCSPNTVTYNTIISTLCKENQVEEATKLALVLTGKGILP 404
Query: 557 DASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKG-CAQNHEAGLMAK 615
D Y +L+Q + ++ A+ L+KEMK +K + ML+ C + G + +
Sbjct: 405 DVCTYNSLIQGLCLSRNHTVAMELYKEMK-TKGCHPDEFTYNMLIDSLCFR----GKLQE 459
Query: 616 LLQEVKEGQRIDCG--VHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVT 673
L +KE + C V +N +I FCK + + +AE+ +M G N+ T+++++
Sbjct: 460 ALNLLKEMEVSGCARNVITYNTLIDGFCKNKRIAEAEEIFDQMELQGVSRNSVTYNTLID 519
Query: 674 GYAAIGGKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEE 733
G + E ++L +M + D+ +S+L F + G +A ++V M
Sbjct: 520 GLCK-SERVEEASQLMDQM----IMEGLRPDKFTYNSLLTYFCKAGDIKKAADIVQTMAS 574
Query: 734 GKMFIDKYKYRTL 746
D Y TL
Sbjct: 575 DGCEPDIVTYGTL 587
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/191 (23%), Positives = 79/191 (41%), Gaps = 10/191 (5%)
Query: 506 QAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALL 565
+A ++ D+M L GV +S Y +L+ ++ R E + L+ G++ D Y +LL
Sbjct: 494 EAEEIFDQMELQGVSRNSVTYNTLIDGLCKSERVEEASQLMDQMIMEGLRPDKFTYNSLL 553
Query: 566 QSKIVQKDTPGALHLFKEMK----ESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVK 621
D A + + M E I G L+ G + KLL+ +
Sbjct: 554 TYFCKAGDIKKAADIVQTMASDGCEPDIVTYG-----TLIAGLCKAGRVEAATKLLRTI- 607
Query: 622 EGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGK 681
+ + I+ H +N VI +++ ++A + + M P+A T+ + G GG
Sbjct: 608 QMKGINLTPHAYNPVIQALFRRKRSKEAVRLFREMIEKAEAPDAVTYKIVFRGLCQGGGP 667
Query: 682 YTEVTELWGEM 692
E + EM
Sbjct: 668 IGEAVDFVMEM 678
Score = 46.6 bits (109), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 82/377 (21%), Positives = 146/377 (38%), Gaps = 72/377 (19%)
Query: 251 PNTNTFNIALAGCLLFETTRKAEQLLDIMPRIGVKADSNLLIIMAHIYERNGRREELRKL 310
P+ TFN+ + G + A +++D+M R G D IY N L KL
Sbjct: 299 PDKYTFNMLVNGLSKTGHVKHALEVMDMMLREGFDPD---------IYTYNSLISGLCKL 349
Query: 311 QRHIDEAVNLSDIQFRQ-------FYNCLLSCHLKFGDLNSASKMVL------------- 350
+DEAV + + + YN ++S K + A+K+ L
Sbjct: 350 G-EVDEAVKVLNQMIERDCSPNTVTYNTIISTLCKENQVEEATKLALVLTGKGILPDVCT 408
Query: 351 --EMLQRAKEARNSLAAAMLPFNAVGVNNRTPSEQNVN-CTNSV--------------DL 393
++Q +RN AM + + P E N +S+ ++
Sbjct: 409 YNSLIQGLCLSRNH-TVAMELYKEMKTKGCHPDEFTYNMLIDSLCFRGKLQEALNLLKEM 467
Query: 394 ENSGIIENHILSY----EDFTKDRKFVALEAEVKRVLQTLLGMLQKQVELITTEHGILQP 449
E SG N +++Y + F K+++ AE + + Q+EL G+ +
Sbjct: 468 EVSGCARN-VITYNTLIDGFCKNKRI----AEAEEIFD--------QMEL----QGVSR- 509
Query: 450 TEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQAHD 509
Y L+ ++ + +E + + + E L+ D ++T G + +A D
Sbjct: 510 NSVTYNTLIDGLCKSERVEEASQLMDQMIMEGLR--PDKFTYNSLLTYFCKAGDIKKAAD 567
Query: 510 LLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKI 569
++ M G Y +L+ +A R T LLR + GI L Y ++Q+
Sbjct: 568 IVQTMASDGCEPDIVTYGTLIAGLCKAGRVEAATKLLRTIQMKGINLTPHAYNPVIQALF 627
Query: 570 VQKDTPGALHLFKEMKE 586
+K + A+ LF+EM E
Sbjct: 628 RRKRSKEAVRLFREMIE 644
Score = 44.3 bits (103), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 57/240 (23%), Positives = 113/240 (47%), Gaps = 16/240 (6%)
Query: 447 LQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQ 506
+P+ I+ +++ +AG+ + L K K +L V +D+ L + + S G ++
Sbjct: 85 FKPSSSIFKEVLHKLGKAGEFDAMKDIL-KEMKISLSVIDNDSLLVFIESYA-SFGLYNE 142
Query: 507 AHDLLDEMHLA-GVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALL 565
+D M + GV A++ Y LL ++ N+ + V + S GI+ D S + L+
Sbjct: 143 ILQFVDAMEVEFGVVANTHFYNFLLNVLVDGNKLKLVEIAHSNMVSRGIRPDVSTFNILI 202
Query: 566 QSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQR 625
++ A+ L +EM++ + + F +++G + E L + VKE Q
Sbjct: 203 KALCRAHQIRPAILLMEEMEDFGL-LPDEKTFTTIMQGFIE--EGNLDGAM--RVKE-QM 256
Query: 626 IDCGVHDWNNVIHF----FCKKRLMQDAEKALKRMRSL--GHLPNAQTFHSMVTGYAAIG 679
++ G N ++ FCK+ +++A + ++ M SL G P+ TF+ +V G + G
Sbjct: 257 VEAGCVVTNVTVNVLVNGFCKEGRIEEALRFIEEM-SLREGFFPDKYTFNMLVNGLSKTG 315
Score = 42.4 bits (98), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 52/246 (21%), Positives = 94/246 (38%), Gaps = 70/246 (28%)
Query: 518 GVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQKDTPGA 577
G+R S + L+KA A++ R L+ + G+ D + ++Q I + + GA
Sbjct: 190 GIRPDVSTFNILIKALCRAHQIRPAILLMEEMEDFGLLPDEKTFTTIMQGFIEEGNLDGA 249
Query: 578 LHLFKEM--------------------KESKIP-----------RSG----HQEFEMLVK 602
+ + ++M KE +I R G F MLV
Sbjct: 250 MRVKEQMVEAGCVVTNVTVNVLVNGFCKEGRIEEALRFIEEMSLREGFFPDKYTFNMLVN 309
Query: 603 GCAQN----HEAGLMAKLLQ---------------------EVKEGQRI-------DCGV 630
G ++ H +M +L+ EV E ++ DC
Sbjct: 310 GLSKTGHVKHALEVMDMMLREGFDPDIYTYNSLISGLCKLGEVDEAVKVLNQMIERDCSP 369
Query: 631 H--DWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTEL 688
+ +N +I CK+ +++A K + G LP+ T++S++ G + +T EL
Sbjct: 370 NTVTYNTIISTLCKENQVEEATKLALVLTGKGILPDVCTYNSLIQGL-CLSRNHTVAMEL 428
Query: 689 WGEMKS 694
+ EMK+
Sbjct: 429 YKEMKT 434
>gi|297723047|ref|NP_001173887.1| Os04g0351333 [Oryza sativa Japonica Group]
gi|255675359|dbj|BAH92615.1| Os04g0351333 [Oryza sativa Japonica Group]
Length = 740
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/235 (21%), Positives = 99/235 (42%), Gaps = 9/235 (3%)
Query: 449 PTEKIYIKLVKAFLEAGKTKE----LTHFLIKAEKENLQVSHDDAALGHVITLCISLGWL 504
PT + A + G+T E ++K K ++ +S+ G+ + L
Sbjct: 186 PTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDI-ISYSTMLHGYATA---TDSCL 241
Query: 505 DQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEAL 564
H++ + M G+ + V+ L+ AY + + D ++ G+ D + +
Sbjct: 242 ADVHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATV 301
Query: 565 LQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQ 624
+ S ALH F M + +P S + L++GC + E +L+ E+
Sbjct: 302 ISSLCRIGRLDDALHKFNHMVDIGVPPS-EAVYGCLIQGCCNHGELVKAKELISEMMNKD 360
Query: 625 RIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIG 679
GV ++++I+ CK+ + + + + M G PN TF+S++ GY +G
Sbjct: 361 IPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVG 415
Score = 63.9 bits (154), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 65/314 (20%), Positives = 135/314 (42%), Gaps = 17/314 (5%)
Query: 431 GMLQKQVELIT--TEHGILQPTEKIYIKLVKAFLEAGKT---KELTHFLIKAEKENLQVS 485
G L K ELI+ I P K + ++ + G+ K++ +++ + V+
Sbjct: 344 GELVKAKELISEMMNKDIPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVT 403
Query: 486 HDDAALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTAL 545
+ G+ + +G +++A LLD M G+ + +Y +L+ Y + R + +
Sbjct: 404 FNSLMEGYCL-----VGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTV 458
Query: 546 LRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCA 605
RD G++ + Y +L + T A +F EM ES S H + +++ G
Sbjct: 459 FRDMLHKGVKPTSVLYSIILHGLFQARRTTAAKKMFHEMIESGTTVSIHT-YGVVLGGLC 517
Query: 606 QNHEAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNA 665
+N+ A +L E + + +N VI K Q+A++ + + G +PN
Sbjct: 518 RNNCTD-EANMLLEKLFAMNVKFDIITFNIVISAMFKVGRRQEAKELFDAISTYGLVPNI 576
Query: 666 QTFHSMVTGYAAIGGKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARAN 725
QT+ M+T Y E L+ ++ ++ D LL+ ++ + A+A+
Sbjct: 577 QTYSMMITNLIK-EESYEEADNLFISVEKSGHAS----DSRLLNHIVRMLLNKAEVAKAS 631
Query: 726 EVVAMMEEGKMFID 739
++++ E + ++
Sbjct: 632 NYLSIIGENNLTLE 645
Score = 43.9 bits (102), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 42/174 (24%), Positives = 79/174 (45%), Gaps = 14/174 (8%)
Query: 526 YASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMK 585
Y L+ Y +RP A++ G+ D Y +L+ + + A LF EM
Sbjct: 17 YNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSY-SLIYGFVKDGEVDKAHCLFLEMM 75
Query: 586 ESKI-PRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRIDCGV----HDWNNVIHFF 640
E + P+ ++K + E ++Q++ +D G+ ++ +I
Sbjct: 76 EQGVLPKI--LICNSIIKELCKMKEMDKAESIVQKM-----VDSGIAPDLFTYSLIIDGL 128
Query: 641 CKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEMKS 694
CK + M AE+ L++M G PN+ T++S++ GY +I G + E ++ +M S
Sbjct: 129 CKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGY-SISGMWNESVRVFKQMSS 181
>gi|224130706|ref|XP_002328356.1| predicted protein [Populus trichocarpa]
gi|222838071|gb|EEE76436.1| predicted protein [Populus trichocarpa]
Length = 613
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 101/221 (45%), Gaps = 10/221 (4%)
Query: 504 LDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEA 563
+D+A LL EM+ + + Y++L++ + RP+E L ++ S G + Y
Sbjct: 389 MDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQLGRPKEALNLFKEMCSYGPHPNLVTYVI 448
Query: 564 LLQSKIVQKDTPGALHLFKEMKESKI-PRSGHQEFEMLVKGCAQNHEAGLMAKLLQEV-K 621
LL AL L K MKE K+ P H + +L++G + + +L ++
Sbjct: 449 LLDGFCKHGHLDEALKLLKSMKEKKLEPNIVH--YTILIEGMFIAGKLEVAKELFSKLFG 506
Query: 622 EGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGK 681
+G R D + + +I K+ L +A ++M G LPN+ +++ M+ G+
Sbjct: 507 DGTRPD--IRTYTVMIKGLLKEGLSDEAYDLFRKMEDDGFLPNSCSYNVMIQGFLQNQDS 564
Query: 682 YTE---VTELWGEMKSFASST-SMNFDEELLDSVLYTFVRG 718
T + E+ G+ S ST M D E D ++ F+RG
Sbjct: 565 STAIRLIDEMVGKRFSVNLSTFQMLLDLESQDEIISQFMRG 605
Score = 55.8 bits (133), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/211 (21%), Positives = 85/211 (40%), Gaps = 38/211 (18%)
Query: 482 LQVSHDDAALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPRE 541
+V+H+ +L +I L +D + +L +M G+ + + +L+ + +E
Sbjct: 122 FRVTHNVYSLNILINCLCRLNHVDFSVSVLGKMFKLGIHPDAITFNALINGLCNEGKIKE 181
Query: 542 VTALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLV 601
L + G + + Y ++ +T A+ +FK+M+++
Sbjct: 182 AVELFNEMVKRGHEPNVISYTTVINGLCKTGNTSMAVDVFKKMEQN-------------- 227
Query: 602 KGCAQNHEAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGH 661
GC N V ++ +I CK RL+ DA + L M G
Sbjct: 228 -GCKPN----------------------VVTYSTIIDSLCKDRLVNDAMEFLSEMVERGI 264
Query: 662 LPNAQTFHSMVTGYAAIGGKYTEVTELWGEM 692
PN T++S+V G+ + G+ E T L+ EM
Sbjct: 265 PPNVFTYNSIVHGFCNL-GQLNEATRLFKEM 294
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 52/251 (20%), Positives = 102/251 (40%), Gaps = 15/251 (5%)
Query: 447 LQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGH--VITLCISLGWL 504
+ P + L+ GK KE E ++ H+ + + VI G
Sbjct: 159 IHPDAITFNALINGLCNEGKIKEAVELF----NEMVKRGHEPNVISYTTVINGLCKTGNT 214
Query: 505 DQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEAL 564
A D+ +M G + + Y++++ + + + L + GI + Y ++
Sbjct: 215 SMAVDVFKKMEQNGCKPNVVTYSTIIDSLCKDRLVNDAMEFLSEMVERGIPPNVFTYNSI 274
Query: 565 LQSKIVQKDTPGALHLFKEMKESKI-PRSGHQEFEMLVKGCAQNHEAGLM--AKLLQEVK 621
+ A LFKEM + P + F +LV G + G++ A+L+ E
Sbjct: 275 VHGFCNLGQLNEATRLFKEMVGRDVMPNT--VTFTILVDGLCK---EGMVSEARLVFETM 329
Query: 622 EGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGK 681
+ ++ + +N ++ +C +RLM +A+K + M G P A +++ ++ GY +
Sbjct: 330 TEKGVEPDISTYNALMDGYCLQRLMNEAKKVFEIMIRKGCAPGAHSYNILINGYCK-SRR 388
Query: 682 YTEVTELWGEM 692
E L EM
Sbjct: 389 MDEAKSLLAEM 399
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 55/238 (23%), Positives = 97/238 (40%), Gaps = 44/238 (18%)
Query: 500 SLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDAS 559
+LG L++A L EM V ++ + L+ + E + G++ D S
Sbjct: 280 NLGQLNEATRLFKEMVGRDVMPNTVTFTILVDGLCKEGMVSEARLVFETMTEKGVEPDIS 339
Query: 560 CYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLV-KGCAQNHEAGLMAKLLQ 618
Y AL+ +Q+ M E+K + FE+++ KGCA
Sbjct: 340 TYNALMDGYCLQR----------LMNEAK------KVFEIMIRKGCAP------------ 371
Query: 619 EVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAI 678
G H +N +I+ +CK R M +A+ L M P+ T+ +++ G +
Sbjct: 372 ----------GAHSYNILINGYCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQL 421
Query: 679 GGKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKM 736
G+ E L+ EM S+ ++ LLD F + G A +++ M+E K+
Sbjct: 422 -GRPKEALNLFKEMCSYGPHPNLVTYVILLDG----FCKHGHLDEALKLLKSMKEKKL 474
>gi|255574927|ref|XP_002528370.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223532238|gb|EEF34042.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 712
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 72/273 (26%), Positives = 117/273 (42%), Gaps = 42/273 (15%)
Query: 457 LVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQAHDLLDEMHL 516
+V++F E GK KE + +I+ + L + L VI + ++LG++D A + DEM
Sbjct: 164 MVRSFSEIGKLKEAVNMVIEMQNHGLVLKA--RILNFVIDVALALGFVDYAEKVFDEMLD 221
Query: 517 AGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLD-ASCYEALLQSKIVQKD-T 574
V S+ Y ++ Y R +V L+D G +D A+C L+ S +K
Sbjct: 222 RAVVPDSTSYKLMVVGYCRMGRISDVDRWLKDMIERGYAVDNATC--TLMISTFSEKGFV 279
Query: 575 PGALHLFKEMKESKI-PR---------------SGHQEFEML----VKGCAQN---HEA- 610
A FK+ + + P S Q FEML KG N H A
Sbjct: 280 NRAFWYFKKWVQMGLNPNLINFSSLINGLCKIGSIKQAFEMLEEMVRKGWKPNVYTHTAL 339
Query: 611 --GLMAK--------LLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLG 660
GL K L ++ V+ + +I+ +CK+ + AE L RM+ G
Sbjct: 340 IDGLCKKGWTEKAFRLFLKLVRSDNYKPNVYTYTCMINGYCKEEKLNRAEMLLIRMKEQG 399
Query: 661 HLPNAQTFHSMVTGYAAIG--GKYTEVTELWGE 691
+PN T+ ++ G+ G G+ E+ +L G+
Sbjct: 400 LVPNTNTYTCLIDGHCKAGNFGRAYELMDLMGK 432
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 50/235 (21%), Positives = 89/235 (37%), Gaps = 45/235 (19%)
Query: 448 QPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAAL---GHVITLCISLGWL 504
+P Y ++ + + K LI+ +++ L + + GH G
Sbjct: 366 KPNVYTYTCMINGYCKEEKLNRAEMLLIRMKEQGLVPNTNTYTCLIDGHC-----KAGNF 420
Query: 505 DQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEAL 564
+A++L+D M G + Y +++ + R E LLR +G+ D Y L
Sbjct: 421 GRAYELMDLMGKEGFTPNIFTYNAIIDGLCKKGRFPEAYKLLRRGLKSGLHADKVTYTIL 480
Query: 565 LQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQ 624
+ Q D AL +F M K G
Sbjct: 481 ISEFCRQTDNKQALAIFSRM-----------------------------------FKVGL 505
Query: 625 RIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIG 679
+ D +H +N +I FC+++ ++++EK + LG LP +T+ SM+ GY G
Sbjct: 506 QPD--MHTYNVLIATFCRQKKVEESEKLFEEAVGLGLLPTKETYTSMICGYCRDG 558
>gi|357443403|ref|XP_003591979.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355481027|gb|AES62230.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 873
Score = 64.3 bits (155), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 64/307 (20%), Positives = 125/307 (40%), Gaps = 11/307 (3%)
Query: 447 LQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQ 506
+QP + L+ + T+E + + D+ V+T L Q
Sbjct: 207 VQPNVNTFNILIHGYCSDNNTEEALRLI--NQMGEYGCCPDNVTYNTVLTALCKRSQLTQ 264
Query: 507 AHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQ 566
DLL +M +G+ + + Y L+ Y + +E ++ G+ D Y +++
Sbjct: 265 VRDLLLQMKNSGLFPNRNTYNILVHGYCKLKWLKEAAEVIELMTGKGMLPDVWTYNTMVR 324
Query: 567 SKIVQKDTPGALHLFKEMKESK-IPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQR 625
+ A+ L +M+ K +P + L+ GC ++ + KL++E+K
Sbjct: 325 GLCDEGKIDEAVRLRDKMESFKLVPDV--VTYNTLIDGCFEHRGSDAAFKLVEEMKARGV 382
Query: 626 IDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEV 685
+ GV N +I +FC + + +A + +M G P+ T+++M+ GY GK E
Sbjct: 383 KENGVTH-NIMIKWFCTEGKIDEASNVMVKMVESGFSPDCFTYNTMINGYCK-AGKMAEA 440
Query: 686 TELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFIDKYKYRT 745
++ EM + D L+++L+T A + + +D+ Y T
Sbjct: 441 YKMMDEM----GRKGLKLDTFTLNTLLHTMCLEKQLDDAYTLTMKARKRGYILDEVTYGT 496
Query: 746 LFLKYHK 752
L + Y K
Sbjct: 497 LIMGYFK 503
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 54/234 (23%), Positives = 101/234 (43%), Gaps = 17/234 (7%)
Query: 507 AHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVT---ALLRDARSAGIQLDASCYEA 563
H + ++M R + +LL A + +N + + +DA G+Q + + +
Sbjct: 157 GHQIFNKMKRLRFRPNLLTCNTLLNALVRSNSSHSLVFSREVFQDAVKLGVQPNVNTFNI 216
Query: 564 LLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEG 623
L+ +T AL L +M E +L C ++ + LLQ G
Sbjct: 217 LIHGYCSDNNTEEALRLINQMGEYGCCPDNVTYNTVLTALCKRSQLTQVRDLLLQMKNSG 276
Query: 624 QRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYT 683
+ + +N ++H +CK + +++A + ++ M G LP+ T+++MV G GK
Sbjct: 277 --LFPNRNTYNILVHGYCKLKWLKEAAEVIELMTGKGMLPDVWTYNTMVRGLCD-EGKID 333
Query: 684 EVTELWGEMKSFASSTSMNFDEELLDSVLY-TFVRGGFFARANEVV-AMMEEGK 735
E L +M+SF + + D V Y T + G F R ++ ++EE K
Sbjct: 334 EAVRLRDKMESF---------KLVPDVVTYNTLIDGCFEHRGSDAAFKLVEEMK 378
Score = 49.3 bits (116), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 105/518 (20%), Positives = 204/518 (39%), Gaps = 60/518 (11%)
Query: 243 NAPLIAMKPNTNTFNIALAGCLLFETTRKAEQLLDIMPRIGVKADSNLLIIMAHIYERNG 302
+A + ++PN NTFNI + G T +A +L++ M G D+ + +
Sbjct: 201 DAVKLGVQPNVNTFNILIHGYCSDNNTEEALRLINQMGEYGCCPDN---VTYNTVLTALC 257
Query: 303 RREELRKLQRHIDEAVNLSDIQFRQFYNCLLSCHLKFGDLNSASKMVLEMLQRAKEARNS 362
+R +L +++ + + N R YN L+ + K L A++ V+E++
Sbjct: 258 KRSQLTQVRDLLLQMKNSGLFPNRNTYNILVHGYCKLKWLKEAAE-VIELMT-------- 308
Query: 363 LAAAMLP----FNAV--GVNNRTPSEQNVNCTN---SVDLENSGIIENHILS--YEDFTK 411
MLP +N + G+ + ++ V + S L + N ++ +E
Sbjct: 309 -GKGMLPDVWTYNTMVRGLCDEGKIDEAVRLRDKMESFKLVPDVVTYNTLIDGCFEHRGS 367
Query: 412 DRKFVALEAEVKRVLQTLLGMLQKQVELITTEHGILQPTEKIYIKLVKAFLEAGKTKELT 471
D F +E R ++ E+G+ T I ++K F GK E +
Sbjct: 368 DAAFKLVEEMKARGVK---------------ENGV---THNI---MIKWFCTEGKIDEAS 406
Query: 472 HFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLK 531
+ ++K + S D +I G + +A+ ++DEM G++ + +LL
Sbjct: 407 NVMVKMVESGF--SPDCFTYNTMINGYCKAGKMAEAYKMMDEMGRKGLKLDTFTLNTLLH 464
Query: 532 AYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPR 591
+ + L AR G LD Y L+ + AL L++EMKE+ I
Sbjct: 465 TMCLEKQLDDAYTLTMKARKRGYILDEVTYGTLIMGYFKDEQADRALKLWEEMKETGIVA 524
Query: 592 SGHQEFEMLVKG-CAQNHEAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAE 650
+ + +++G C + KL + +++G D N +IH +C + ++ A
Sbjct: 525 T-IITYNTIIRGLCLSGKTDQAVDKLNELLEKGLVPDESTS--NIIIHGYCWEGAVEKAF 581
Query: 651 KALKRMRSLGHLPNAQTFHSMVTGYAAIG--GKYTEVTELWGEMKSFASSTSMNFDEELL 708
+ +M P+ T + ++ G G K + W S D
Sbjct: 582 QFHNKMVEHSLKPDIFTCNILLRGLCREGMLEKGLTLFNTW-------ISKGKPMDTVTY 634
Query: 709 DSVLYTFVRGGFFARANEVVAMMEEGKMFIDKYKYRTL 746
+ ++ +F + A +++ ME + D+Y Y +
Sbjct: 635 NIIISSFCKERRLEDAFDLMTEMEGKNLEPDRYTYNAI 672
Score = 44.7 bits (104), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 100/533 (18%), Positives = 206/533 (38%), Gaps = 46/533 (8%)
Query: 251 PNTNTFNIALAGCLLFETTRKAEQLLDIMPRIGVKADSNLLIIMAHIYERNGRREELRKL 310
PN NT+NI + G + ++A +++++M G+ D M G+ +E +L
Sbjct: 279 PNRNTYNILVHGYCKLKWLKEAAEVIELMTGKGMLPDVWTYNTMVRGLCDEGKIDEAVRL 338
Query: 311 QRHIDEAVNLSDIQFRQFYNCLLSCHLKFGDLNSASKMVLEMLQRAKEARNSLAAAMLPF 370
+ ++ + D+ YN L+ + ++A K+V EM R + M+ +
Sbjct: 339 RDKMESFKLVPDVVT---YNTLIDGCFEHRGSDAAFKLVEEMKARGVKENGVTHNIMIKW 395
Query: 371 NAVGVNNRTPSEQNVNCTNSVDLENSGIIENHILSYEDFTKDRKFVALEAEVKRVLQTLL 430
+ NV V + SG + +Y AE +++
Sbjct: 396 --FCTEGKIDEASNV----MVKMVESGFSPD-CFTYNTMINGYCKAGKMAEAYKMMDE-- 446
Query: 431 GMLQKQVELITTEHGILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAA 490
M +K ++L T L T + +L A+ K ++ + L D+
Sbjct: 447 -MGRKGLKLDTFTLNTLLHTMCLEKQLDDAYTLTMKARKRGYIL------------DEVT 493
Query: 491 LGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDAR 550
G +I D+A L +EM G+ A+ Y ++++ + + + L +
Sbjct: 494 YGTLIMGYFKDEQADRALKLWEEMKETGIVATIITYNTIIRGLCLSGKTDQAVDKLNELL 553
Query: 551 SAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEA 610
G+ D S ++ + A +M E + + +L++G +
Sbjct: 554 EKGLVPDESTSNIIIHGYCWEGAVEKAFQFHNKMVEHSL-KPDIFTCNILLRGLCRE--- 609
Query: 611 GLMAKLLQ----EVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQ 666
G++ K L + +G+ +D +N +I FCK+R ++DA + M P+
Sbjct: 610 GMLEKGLTLFNTWISKGKPMDTVT--YNIIISSFCKERRLEDAFDLMTEMEGKNLEPDRY 667
Query: 667 TFHSMVTGYAAIGGKYTEVTEL-------WGEMKSFASSTSMNFDEELLDSVLYTFVRGG 719
T++++VTG G+ E +L ++K+ +S + + + + + G
Sbjct: 668 TYNAIVTGLTK-AGRTEEAEKLALKFAEKGQQVKTQDTSPELGTSDMMYSEQISSLCTQG 726
Query: 720 FFARANEVVAMMEEGKMFIDKYKYRTL---FLKYHKTLYKGKTPKFQTEAQLK 769
+ A ++ E+ + ++KY Y L LK K+ F A ++
Sbjct: 727 KYKDAMKLFQQAEQKGVSLNKYTYIKLMDGLLKRRKSFTTTSLLPFMVSATIQ 779
>gi|9502386|gb|AAF88093.1|AC025417_21 T12C24.22 [Arabidopsis thaliana]
Length = 1245
Score = 64.3 bits (155), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 82/324 (25%), Positives = 129/324 (39%), Gaps = 18/324 (5%)
Query: 429 LLGMLQKQVELIT--TEHGILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSH 486
L G + + V L+ E+G QP Y +V +G T L K E+ N V
Sbjct: 160 LEGKVSEAVVLVDRMVENGC-QPDVVTYNSIVNGICRSGDTSLALDLLRKMEERN--VKA 216
Query: 487 DDAALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALL 546
D +I G +D A L EM G+++S Y SL++ +A + + LL
Sbjct: 217 DVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLL 276
Query: 547 RDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKG-CA 605
+D S I + + LL + + A L+KEM I + L+ G C
Sbjct: 277 KDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGIS-PNIITYNTLMDGYCM 335
Query: 606 QNH--EAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLP 663
QN EA M L+ K I + ++I +C + + D K + + G +
Sbjct: 336 QNRLSEANNMLDLMVRNKCSPDI----VTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVA 391
Query: 664 NAQTFHSMVTGYAAIGGKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFAR 723
NA T+ +V G+ GK EL+ EM S + LLD G +
Sbjct: 392 NAVTYSILVQGFCQ-SGKIKLAEELFQEMVSHGVLPDVMTYGILLDG----LCDNGKLEK 446
Query: 724 ANEVVAMMEEGKMFIDKYKYRTLF 747
A E+ +++ KM + Y T+
Sbjct: 447 ALEIFEDLQKSKMDLGIVMYTTII 470
Score = 48.9 bits (115), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 82/188 (43%), Gaps = 7/188 (3%)
Query: 560 CYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQE 619
C+ L+S IV A+ LF+EM S+ P +F A+ + L+ ++
Sbjct: 45 CFRERLRSGIVDIKKDDAIALFQEMIRSR-PLPSLVDFSRFFSAIARTKQFNLVLDFCKQ 103
Query: 620 VKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIG 679
+ E I ++ N +I+ FC+ A L ++ LG+ P+ TF++++ G +
Sbjct: 104 L-ELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGL-FLE 161
Query: 680 GKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFID 739
GK +E L M D +S++ R G + A +++ MEE + D
Sbjct: 162 GKVSEAVVLVDRMVENGCQP----DVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKAD 217
Query: 740 KYKYRTLF 747
+ Y T+
Sbjct: 218 VFTYSTII 225
Score = 47.0 bits (110), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 39/177 (22%), Positives = 75/177 (42%), Gaps = 4/177 (2%)
Query: 504 LDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEA 563
L +A+++LD M + SL+K Y R + + R+ G+ +A Y
Sbjct: 339 LSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSI 398
Query: 564 LLQSKIVQKDTPGALHLFKEM-KESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKE 622
L+Q A LF+EM +P + +L+ G N + ++ +++++
Sbjct: 399 LVQGFCQSGKIKLAEELFQEMVSHGVLPDV--MTYGILLDGLCDNGKLEKALEIFEDLQK 456
Query: 623 GQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIG 679
++D G+ + +I CK ++DA + G PN T+ M++G G
Sbjct: 457 -SKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKG 512
Score = 47.0 bits (110), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 91/473 (19%), Positives = 192/473 (40%), Gaps = 32/473 (6%)
Query: 247 IAMKPNTNTFNIALAGCLLFETTRKAEQLLDIMPRIGVKADSNLLIIMAHIYERNGRREE 306
+ +P+T TFN + G L +A L+D M G + D + + R+G
Sbjct: 142 LGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSL 201
Query: 307 LRKLQRHIDEAVNLSDIQFRQFYNCLLSCHLKFGDLNSASKMVLEMLQRAKEARNSLAAA 366
L R ++E +D+ Y+ ++ + G +++A + EM + + ++
Sbjct: 202 ALDLLRKMEERNVKADVFT---YSTIIDSLCRDGCIDAAISLFKEMETKG------IKSS 252
Query: 367 MLPFNAVGVNNRTPSEQNVNCTNSVDLENSGIIENHILSYEDFTKDRKFVALEAEVKRVL 426
++ +N++ + N D+ + I+ N ++++ V L+ VK
Sbjct: 253 VVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPN-VITFN--------VLLDVFVKE-- 301
Query: 427 QTLLGMLQKQVELI--TTEHGILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQV 484
G LQ+ EL GI P Y L+ + + E + L + +
Sbjct: 302 ----GKLQEANELYKEMITRGI-SPNIITYNTLMDGYCMQNRLSEANNMLDLMVRN--KC 354
Query: 485 SHDDAALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTA 544
S D +I + +D + + G+ A++ Y+ L++ + ++ + +
Sbjct: 355 SPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEE 414
Query: 545 LLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGC 604
L ++ S G+ D Y LL AL +F+++++SK+ G + +++G
Sbjct: 415 LFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDL-GIVMYTTIIEGM 473
Query: 605 AQNHEAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPN 664
+ + L + + + V + +I CKK + +A L++M G+ PN
Sbjct: 474 CKGGKVEDAWNLFCSLP-CKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPN 532
Query: 665 AQTFHSMVTGYAAIGGKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVR 717
T+++++ + G T +L EMKS S + + ++D +L R
Sbjct: 533 DCTYNTLIRAHLR-DGDLTASAKLIEEMKSCGFSADASSIKMVIDMLLSAMKR 584
>gi|302763353|ref|XP_002965098.1| hypothetical protein SELMODRAFT_83321 [Selaginella moellendorffii]
gi|300167331|gb|EFJ33936.1| hypothetical protein SELMODRAFT_83321 [Selaginella moellendorffii]
Length = 600
Score = 64.3 bits (155), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/230 (22%), Positives = 102/230 (44%), Gaps = 11/230 (4%)
Query: 449 PTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQAH 508
P +Y L+ G+ E H ++ + D G +I +G ++ A
Sbjct: 316 PDVILYTSLIDLLFSTGRVPEARHVFDSMIEKG--CAPDALTYGTIIQNFSKIGNVEAAG 373
Query: 509 DLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSK 568
++L+ M +GV Y SL+ Y++ R + + ++GI+ +A + L+
Sbjct: 374 EILELMAKSGVGPDCFAYNSLMDGYVKLERVDQAFGVYDRMVASGIKPNAVTFNVLMHGL 433
Query: 569 IVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRIDC 628
T A LFKEM E + + +L+ G + AG +++ + +E ID
Sbjct: 434 FKDGKTDRAFSLFKEMLEKEEVPPTLVSYTILIDGLGK---AGRVSEAFLQFQE--MIDR 488
Query: 629 GV----HDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTG 674
G+ H + ++I+ K + +A+K ++ M LG P+ Q + +++TG
Sbjct: 489 GIIPECHTYTSLIYSLAKAGRIPEAKKLVEDMVKLGVNPDVQAYSALITG 538
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 59/307 (19%), Positives = 127/307 (41%), Gaps = 14/307 (4%)
Query: 447 LQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQ 506
+P +Y ++ + +AG + +F K +L V + VI +D+
Sbjct: 72 FRPDVFLYTSVIHGYCKAGDL-DTGYFRAVTPKASLDV----ISYTTVIKGLADSKRIDE 126
Query: 507 AHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQ 566
A +L +E+ AG + Y +++ ++A R + + + + Y ++
Sbjct: 127 ACELFEELKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEEMSGSSCVPTRTTYTVVID 186
Query: 567 SKIVQKDTPGALHLFKEM-KESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQR 625
+ P A +F++M ++ +P + + L+ G ++ + KLL +V +
Sbjct: 187 GLCKAQMLPDACKVFEQMVQKGCVPDT--ITYTTLIDGFSKASKMDEARKLL-DVMLTKG 243
Query: 626 IDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEV 685
+ + +++H FCK ++ +A++ + +MR G P F S+++ Y + G+ E
Sbjct: 244 PEPTAVTYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSLLSYYLS-KGRAEEA 302
Query: 686 TELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFIDKYKYRT 745
++ EM + + + L+D + T G A V M E D Y T
Sbjct: 303 YQVLTEMTARGCAPDVILYTSLIDLLFST----GRVPEARHVFDSMIEKGCAPDALTYGT 358
Query: 746 LFLKYHK 752
+ + K
Sbjct: 359 IIQNFSK 365
>gi|218197339|gb|EEC79766.1| hypothetical protein OsI_21159 [Oryza sativa Indica Group]
Length = 410
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 66/290 (22%), Positives = 120/290 (41%), Gaps = 10/290 (3%)
Query: 458 VKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQAHDLLDEMHLA 517
V+ AG + L + K + D A ++ C G + +A + DEM L
Sbjct: 9 VRRLCAAGDVRSALAMLARGTKSG-DAALDVTACTALVNGCCKGGDVAEARRVFDEMPLL 67
Query: 518 GVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQKDTPGA 577
G+ + Y +L+ Y + + AL + R G++ + Y L+ + A
Sbjct: 68 GLAPNEVTYTALMHGYFTHGQREKGFALFEEMRRGGVEPNLYTYNCLIGEWCRTGEFERA 127
Query: 578 LHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVK-EGQRIDCGVHDWNNV 636
LF EM I R+ + L+ G ++ + AKLL ++ EG R + +N +
Sbjct: 128 RSLFDEMPVRGIVRN-VVSYNTLIAGLCRHGKLWDAAKLLDMMRTEGTRPS--IITFNLL 184
Query: 637 IHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEMKSFA 696
+ + K M +A +M++ G P+A T++ ++ G+ T +MK
Sbjct: 185 VDGYGKAGKMSNALPFFNQMKAAGFQPSAVTYNMLIAGFCR-ARDMTRANRALSDMKERG 243
Query: 697 SSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFIDKYKYRTL 746
+ L+DS F R +A E++A ME+ + +D + Y L
Sbjct: 244 LEPTKVTYTILIDS----FARENHMGKAFEILAGMEKAGLEVDAHTYGVL 289
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 74/182 (40%), Gaps = 4/182 (2%)
Query: 502 GWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCY 561
G L A LLD M G R S + L+ Y +A + ++AG Q A Y
Sbjct: 157 GKLWDAAKLLDMMRTEGTRPSIITFNLLVDGYGKAGKMSNALPFFNQMKAAGFQPSAVTY 216
Query: 562 EALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEV- 620
L+ +D A +MKE + + + +L+ A+ + G ++L +
Sbjct: 217 NMLIAGFCRARDMTRANRALSDMKERGLEPT-KVTYTILIDSFARENHMGKAFEILAGME 275
Query: 621 KEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGG 680
K G +D H + ++ C + M+DA K + M G P+ + M+ GY G
Sbjct: 276 KAGLEVD--AHTYGVLVRALCMEGNMKDARKLFQSMGEKGVEPSNVIYDMMIYGYGREGS 333
Query: 681 KY 682
Y
Sbjct: 334 SY 335
Score = 45.8 bits (107), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 75/334 (22%), Positives = 133/334 (39%), Gaps = 37/334 (11%)
Query: 245 PLIAMKPNTNTFNIALAGCLLFETTRKAEQLLDIMPRIGVKADSNLLIIMAHIYERNGRR 304
PL+ + PN T+ + G K L + M R GV+ + + + R G
Sbjct: 65 PLLGLAPNEVTYTALMHGYFTHGQREKGFALFEEMRRGGVEPNLYTYNCLIGEWCRTGEF 124
Query: 305 EELRKLQRHIDEAVNLSDIQFRQFYNCLLSCHLKFGDLNSASKMVLEMLQRAKEARNSLA 364
E R L DE ++ YN L++ + G L A+K+ L+M+ R + R S+
Sbjct: 125 ERARSL---FDEMPVRGIVRNVVSYNTLIAGLCRHGKLWDAAKL-LDMM-RTEGTRPSII 179
Query: 365 AAMLPFNAVG----VNNRTPSEQNVNCTNSVDLENSGIIENHILSYEDFTKDRKFVALEA 420
L + G ++N P N + + S + N +++ F + R
Sbjct: 180 TFNLLVDGYGKAGKMSNALPF---FNQMKAAGFQPSAVTYNMLIA--GFCRAR------- 227
Query: 421 EVKRVLQTLLGMLQKQVELITTEHGILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKE 480
++ R + L M ++ L+PT+ Y L+ +F + L EK
Sbjct: 228 DMTRANRALSDMKERG----------LEPTKVTYTILIDSFARENHMGKAFEILAGMEKA 277
Query: 481 NLQV-SHDDAALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRP 539
L+V +H L V LC+ G + A L M GV S+ +Y ++ Y
Sbjct: 278 GLEVDAHTYGVL--VRALCME-GNMKDARKLFQSMGEKGVEPSNVIYDMMIYGYGREGSS 334
Query: 540 REVTALLRDARSAGIQLDASCYEALLQSKIVQKD 573
+ L+ + R G+ +++ Y L +++ KD
Sbjct: 335 YKALKLIMEMRQKGLIPNSASYG--LTIRVLCKD 366
Score = 45.8 bits (107), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 49/232 (21%), Positives = 97/232 (41%), Gaps = 18/232 (7%)
Query: 435 KQVELITTEHGILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHV 494
K ++++ TE +P+ + LV + +AGK F + + Q S
Sbjct: 164 KLLDMMRTEG--TRPSIITFNLLVDGYGKAGKMSNALPFFNQMKAAGFQPS--------A 213
Query: 495 ITLCISLGWLDQAHDL------LDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRD 548
+T + + +A D+ L +M G+ + Y L+ ++ N + +L
Sbjct: 214 VTYNMLIAGFCRARDMTRANRALSDMKERGLEPTKVTYTILIDSFARENHMGKAFEILAG 273
Query: 549 ARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNH 608
AG+++DA Y L+++ ++ + A LF+ M E + S + ++M++ G +
Sbjct: 274 MEKAGLEVDAHTYGVLVRALCMEGNMKDARKLFQSMGEKGVEPS-NVIYDMMIYGYGREG 332
Query: 609 EAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLG 660
+ KL+ E+++ I + I CK Q+AE L M G
Sbjct: 333 SSYKALKLIMEMRQKGLIP-NSASYGLTIRVLCKDDKCQEAEALLDDMVRAG 383
>gi|302757525|ref|XP_002962186.1| hypothetical protein SELMODRAFT_76934 [Selaginella moellendorffii]
gi|300170845|gb|EFJ37446.1| hypothetical protein SELMODRAFT_76934 [Selaginella moellendorffii]
Length = 855
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/230 (22%), Positives = 101/230 (43%), Gaps = 11/230 (4%)
Query: 449 PTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQAH 508
P +Y L+ G+ E H ++ + D G +I +G ++ A
Sbjct: 571 PDVILYTSLIDLLFSTGRVPEARHVFDSMIEKG--CAPDALTYGTIIQNFSKIGNVEAAG 628
Query: 509 DLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSK 568
++L+ M +GV Y SL+ Y++ R + + ++GI+ +A + L+
Sbjct: 629 EILELMAKSGVGPDCFAYNSLMDGYVKLERVDQAFGVYDRMVASGIKPNAVTFNVLMHGL 688
Query: 569 IVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRIDC 628
T A LFKEM E + +L+ G + AG +++ + +E ID
Sbjct: 689 FKDGKTDRAFSLFKEMLEKDEVPPTLVSYTILIDGLGK---AGRVSEAFSQFQE--MIDR 743
Query: 629 GV----HDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTG 674
G+ H + ++I+ K + +A+K ++ M LG P+ Q + +++TG
Sbjct: 744 GIIPECHTYTSLIYSLAKAGRIPEAKKLVEDMVKLGVNPDVQAYSALITG 793
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 58/306 (18%), Positives = 125/306 (40%), Gaps = 17/306 (5%)
Query: 448 QPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQA 507
+P Y +++ +A + +E F +A D + VI +D+A
Sbjct: 331 KPNAATYTTIIQGLYDAQRMEEAKAFFDEA--------LDVISYTTVIKGLADSKRIDEA 382
Query: 508 HDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQS 567
+L +++ AG + Y +++ ++A R + D + + Y ++
Sbjct: 383 CELFEKLKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEDMSGSSCVPTRTTYTVVIDG 442
Query: 568 KIVQKDTPGALHLFKEM-KESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRI 626
+ P A +F++M ++ +P + + L+ G ++ + KLL +V +
Sbjct: 443 LCKAQMLPDACKVFEQMVQKGCVPDT--ITYTTLIDGFSKASKMDEARKLL-DVMLTKGP 499
Query: 627 DCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVT 686
+ + +++H FCK ++ +A++ + +MR G P F S+++ Y + G+ E
Sbjct: 500 EPTAVTYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSLLSYYLS-KGRAEEAY 558
Query: 687 ELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFIDKYKYRTL 746
++ EM + + + L+D + T G A V M E D Y T+
Sbjct: 559 QVLTEMTARGCAPDVILYTSLIDLLFST----GRVPEARHVFDSMIEKGCAPDALTYGTI 614
Query: 747 FLKYHK 752
+ K
Sbjct: 615 IQNFSK 620
Score = 47.8 bits (112), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 62/298 (20%), Positives = 121/298 (40%), Gaps = 30/298 (10%)
Query: 448 QPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAAL-GHVITLCISLGWLDQ 506
+P + L+ F +AG+ ++ H L+ + L+ D L VI G LD
Sbjct: 87 EPDVIAFTTLIHGFCKAGQ-PQVGHMLLN---QALKRFRPDVFLYTSVIHGYCKAGDLDT 142
Query: 507 AHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQ 566
+L+EM AG ++ Y L+ + R E L R +G D + L++
Sbjct: 143 GFKILEEMLAAGCIPDAAAYFVLIDPLCKLGRVDEAYELFERMRKSGCLGDYVTFMTLIE 202
Query: 567 SKIVQKDTPGALHLFKEMKESKIPRSGHQEF----EMLVKGCAQNHEAGLMAKLLQEVKE 622
+ A L++EM E G++ + + L+ + + ++ Q V
Sbjct: 203 ALSNHGKLDEACELYREMIER-----GYEPYLEVQDSLIFALCKAGKVDEANEIYQTVV- 256
Query: 623 GQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKY 682
+++ +N+++ +CK + D K L +M + P+ QT++ +V G++ +
Sbjct: 257 AKKVATSRVAYNSLMDGYCKLGRVDDGLKLLLQMVECDNFPDIQTYNILVAGFSR-ANRL 315
Query: 683 TEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFIDK 740
+ EL+ + S+ ++ YT + G + MEE K F D+
Sbjct: 316 DDALELFKLLSSYGCKP---------NAATYTTIIQGLYDAQR-----MEEAKAFFDE 359
>gi|224083253|ref|XP_002306972.1| predicted protein [Populus trichocarpa]
gi|222856421|gb|EEE93968.1| predicted protein [Populus trichocarpa]
Length = 709
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/249 (22%), Positives = 116/249 (46%), Gaps = 7/249 (2%)
Query: 447 LQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQ 506
L+P + Y L++ +++AG K+ F++ +E E VS ++ +I + G +
Sbjct: 336 LKPRTRAYNALLRGYVKAGLLKD-AEFVV-SEMERSGVSPNEQTYSFLIDAYGNAGRWES 393
Query: 507 AHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQ 566
A +L EM + V+ ++ V++ +L +Y + ++ +LR+ ++G++ D Y ++
Sbjct: 394 ARIVLKEMEASNVQPNAYVFSRILSSYRDKGEWQKSFQVLREMENSGVRPDRVFYNVMID 453
Query: 567 SKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGC-AQNHEAGLMAKLLQEVKEGQR 625
+ A+ F M I ++ C A H+ +L +E+ EG
Sbjct: 454 TFGKFNCLDHAMATFDRMLSEGIEPDTVTWNTLIDCHCRAGKHDRA--EELFEEMMEGGY 511
Query: 626 IDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEV 685
C +N +I+ F + D + L MRS G +PN+ T+ +++ Y G++ +
Sbjct: 512 SPCNTT-FNIMINSFGDQERWDDVKNLLAHMRSQGLVPNSVTYTTLIDIYGK-SGRFNDA 569
Query: 686 TELWGEMKS 694
E +MK+
Sbjct: 570 IECLDDMKA 578
Score = 42.4 bits (98), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 59/324 (18%), Positives = 137/324 (42%), Gaps = 20/324 (6%)
Query: 433 LQKQVELITTEHGILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALG 492
L V L +H + E +Y L+ A G++++L + ++++NL +A
Sbjct: 150 LAYAVVLWLQKHNLCFSYELLYSILIHAL---GQSEKLYEAFLLSQRQNLTPLTYNA--- 203
Query: 493 HVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPRE--VTALLRDAR 550
+I+ C L++A +L+ M G + Y+ ++++ + NR + L R+
Sbjct: 204 -LISACARNNDLEKALNLITRMRQDGYPSDFVNYSLIIRSLMRKNRVDSAILQKLYREIE 262
Query: 551 SAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEML--VKGCAQNH 608
++LD ++ D AL ++ S + ++ + C +
Sbjct: 263 CDKLELDVQLSNDIIVGFAKAGDLSKALEFLGVVQGSGLSVKTATLVAVIWALGNCGRTV 322
Query: 609 EAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTF 668
EA + +E+++ + +N ++ + K L++DAE + M G PN QT+
Sbjct: 323 EA---EAIFEEMRDNG-LKPRTRAYNALLRGYVKAGLLKDAEFVVSEMERSGVSPNEQTY 378
Query: 669 HSMVTGYAAIGGKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVV 728
++ Y G++ + EM+ ++++ + + +L ++ G + ++ +V+
Sbjct: 379 SFLIDAYGN-AGRWESARIVLKEME----ASNVQPNAYVFSRILSSYRDKGEWQKSFQVL 433
Query: 729 AMMEEGKMFIDKYKYRTLFLKYHK 752
ME + D+ Y + + K
Sbjct: 434 REMENSGVRPDRVFYNVMIDTFGK 457
>gi|357110839|ref|XP_003557223.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
mitochondrial-like [Brachypodium distachyon]
Length = 897
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 70/310 (22%), Positives = 134/310 (43%), Gaps = 21/310 (6%)
Query: 450 TEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQAHD 509
E Y ++ +G +E F K E + +S D G ++ G L +A
Sbjct: 279 NEVTYNVMISGLCRSGAVEE--AFGFKEEMVDYGLSPDAFTYGALMNGLCKGGRLKEAKA 336
Query: 510 LLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKI 569
LLDEM +G++ + VYA+L+ +++ + E +L + SAG+Q + Y+ L++
Sbjct: 337 LLDEMSCSGLKPNVVVYATLVDGFMKEGKAAEAFDILNEMISAGVQPNKIMYDNLIRGLC 396
Query: 570 VQKDTPGALHLFKEMKESKIPRSGHQE----FEMLVKGCAQNHEAGLMAKLLQEVKEGQR 625
A L EM + GH+ + L++G Q+++ +LL E++
Sbjct: 397 KIGQLGRASKLLNEMI-----KVGHRPDTFTYHPLMQGHFQHYDKDGAFELLNEMRNSGI 451
Query: 626 IDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEV 685
+ + + +I+ C+ ++A L+ M S G PNA + ++ G++ G
Sbjct: 452 LP-NAYTYGIMINGLCQNGESKEAGNLLEEMISEGLKPNAFMYAPLIIGHSKEG------ 504
Query: 686 TELWGEMKSFASSTSMNFDEELL--DSVLYTFVRGGFFARANEVVAMMEEGKMFIDKYKY 743
+ +S + T N +L +S++ G A E A +++ + D++ Y
Sbjct: 505 -HISLACESLENMTKANVLPDLFCYNSLIKGLSTVGRIEEAEEYYAQVQKRGLVPDEFTY 563
Query: 744 RTLFLKYHKT 753
L Y KT
Sbjct: 564 SGLIHGYCKT 573
Score = 62.4 bits (150), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 64/308 (20%), Positives = 134/308 (43%), Gaps = 11/308 (3%)
Query: 447 LQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQ 506
L P Y L+ + G+ KE L + L+ + ++ + G +
Sbjct: 311 LSPDAFTYGALMNGLCKGGRLKEAKALLDEMSCSGLK--PNVVVYATLVDGFMKEGKAAE 368
Query: 507 AHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQ 566
A D+L+EM AGV+ + +Y +L++ + + + LL + G + D Y L+Q
Sbjct: 369 AFDILNEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLNEMIKVGHRPDTFTYHPLMQ 428
Query: 567 SKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQE-VKEGQR 625
D GA L EM+ S I + + + +++ G QN E+ LL+E + EG +
Sbjct: 429 GHFQHYDKDGAFELLNEMRNSGILPNAYT-YGIMINGLCQNGESKEAGNLLEEMISEGLK 487
Query: 626 IDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEV 685
+ + + +I K+ + A ++L+ M LP+ ++S++ G + + G+ E
Sbjct: 488 PNAFM--YAPLIIGHSKEGHISLACESLENMTKANVLPDLFCYNSLIKGLSTV-GRIEEA 544
Query: 686 TELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFIDKYKYRT 745
E + +++ + DE +++ + + +A++++ M + + Y
Sbjct: 545 EEYYAQVQ----KRGLVPDEFTYSGLIHGYCKTRNLEKADQLLQQMLNSGLKPNADTYTD 600
Query: 746 LFLKYHKT 753
L Y K+
Sbjct: 601 LLEGYFKS 608
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 63/280 (22%), Positives = 115/280 (41%), Gaps = 19/280 (6%)
Query: 421 EVKRVLQTLLGMLQKQVELITTEHGILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKE 480
+V +LQ++LG K P IY +++ L + E+ F++ E E
Sbjct: 613 KVSSILQSMLGSGDK-------------PDNHIYGIVIRN-LSRSENMEVA-FMVLTEVE 657
Query: 481 NLQVSHDDAALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPR 540
+ D +I+ + +++A LLDEM G+ Y +L+ + +
Sbjct: 658 KNGLVPDLHIYSSLISGLCKMADMEKAVGLLDEMAKEGLEPGIVCYNALIDGFCRSGDIS 717
Query: 541 EVTALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEML 600
+ + G+ + Y AL+ D A L+K+M + I + +L
Sbjct: 718 RARNVFDSILAKGLLPNCVTYTALIDGNCKNGDITDAFDLYKDMLDRGIAPDAFV-YNVL 776
Query: 601 VKGCAQNHEAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLG 660
GC+ A L L + R V ++ ++ FCK+ +Q+ EK L M
Sbjct: 777 ATGCSD--AADLEQALFLTEEMFNRGYAHVSLFSTLVRGFCKRGRLQETEKLLHVMMDRE 834
Query: 661 HLPNAQTFHSMVTGYAAIGGKYTEVTELWGEMKSFASSTS 700
+PNAQT +++T + GK E ++ E++ +S S
Sbjct: 835 IVPNAQTVENVITEFGK-AGKLCEAHRVFAELQQKKASQS 873
>gi|357475985|ref|XP_003608278.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|124359684|gb|ABD32353.2| Tetratricopeptide-like helical [Medicago truncatula]
gi|355509333|gb|AES90475.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 870
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 100/220 (45%), Gaps = 9/220 (4%)
Query: 531 KAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIP 590
++ ++ NRP VT+L D G+ + + L+QS A LF +M E K
Sbjct: 124 RSSLQQNRPHYVTSLYTDMIQTGVNPETYTFNLLIQSLCESNALDHARELFDKMSE-KGC 182
Query: 591 RSGHQEFEMLVKGCAQNHEAGLMAKLLQEV--KEGQRIDCGVHDWNNVIHFFCKKRLMQD 648
+ +LV+G + AG + L+ V K G ++ V +N ++ FCK+ + +
Sbjct: 183 QPNKFTVGILVRGFCR---AGRTKQALEFVDGKMGGNVNRVV--YNTLVSSFCKQDMNDE 237
Query: 649 AEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEMKSFASSTSMNFDEELL 708
AEK ++RM G LP+ TF+S ++ GK E + ++ +M+ +
Sbjct: 238 AEKLVERMTEKGLLPDVVTFNSRISALCR-AGKVFEASRIFRDMQMDGELGLPKPNVVTF 296
Query: 709 DSVLYTFVRGGFFARANEVVAMMEEGKMFIDKYKYRTLFL 748
+ +L F + G A +V M++G F+ Y T L
Sbjct: 297 NLMLKGFCQEGMMEEARSLVETMKKGGNFVSLESYNTWLL 336
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 96/460 (20%), Positives = 174/460 (37%), Gaps = 57/460 (12%)
Query: 248 AMKPNTNTFNIALAGCLLFETTRKAEQLLDIMPRIGVKADSNLLIIMAHIYERNGRREEL 307
++PN ++NI + G A +L+D+M GV D+ + H Y G+ E
Sbjct: 358 GIEPNIYSYNIVMDGLCRNHMMLDARRLMDLMVSNGVYPDTVTYTTLLHGYCSKGKVFEA 417
Query: 308 RKLQRHIDEAVNLSDIQFRQFYNCLLSCHLKFGDLNSASKMVLEMLQRAKEARNSL--AA 365
+ + ++E + N LL+ K G + A EMLQ+ E L
Sbjct: 418 KAI---LNEMIRKGCHPNTYTCNTLLNSLWKEGRKSEAE----EMLQKMNEKSYQLDTVT 470
Query: 366 AMLPFNAVGVN------NRTPSEQNVNCTNSVDLEN--SGIIEN---------HILSYED 408
+ N + N + SE + TNS+ EN +G++ + +++Y
Sbjct: 471 CNIVVNGLCRNGELEKASEVVSEMWTDGTNSLGKENPVAGLVNSIHNVSTNVPDVITYTT 530
Query: 409 FTKDRKFVALEAEVKRVLQTLLGMLQKQVELITTEHGILQPTEKIYIKLVKAFLEAGKTK 468
V E K+ K +E++ L P Y V F + GK
Sbjct: 531 LINGLCKVGKLEEAKK----------KFIEMMAKN---LHPDSVTYDTFVLNFCKQGKIS 577
Query: 469 ELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYAS 528
L E+ S +I S G + + + L+DEM G+ Y +
Sbjct: 578 SALRVLKDMERNG--CSKTLQTYNSLILGLGSKGQIFEMYGLMDEMRERGIHPDICTYNN 635
Query: 529 LLKAYIEANRPREVTALLRDARSAG-IQLDASCYEALLQSKIVQKDTPGALHLFKEMKES 587
++ E + ++ T+LL + G + + S ++ L+++ D A LF +
Sbjct: 636 MINCLCEGGKTKDATSLLHEMLDKGVVSPNVSSFKILIKAFCKSGDFKVACELF----DV 691
Query: 588 KIPRSGHQE------FEMLVKGCAQNHEAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFC 641
+ GH+E F L+ G + AK L E + + + ++I C
Sbjct: 692 ALSVCGHKEALYSLMFNELLAGGKLSD-----AKELFEASLERSLLSKNFMYEDLIDKLC 746
Query: 642 KKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGK 681
K + DA L+++ G+ + +F ++ G + G K
Sbjct: 747 KDGRLDDAHGLLQKLIDKGYCFDHSSFIPVIDGLSKRGNK 786
Score = 47.0 bits (110), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 55/258 (21%), Positives = 104/258 (40%), Gaps = 29/258 (11%)
Query: 448 QPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQA 507
QP + LV+ F AG+TK+ F+ N+ + +++ D+A
Sbjct: 183 QPNKFTVGILVRGFCRAGRTKQALEFVDGKMGGNV----NRVVYNTLVSSFCKQDMNDEA 238
Query: 508 HDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAG-------------I 554
L++ M G+ + S + A A + E + + RD + G +
Sbjct: 239 EKLVERMTEKGLLPDVVTFNSRISALCRAGKVFEASRIFRDMQMDGELGLPKPNVVTFNL 298
Query: 555 QLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMA 614
L C E +++ A L + MK+ S + + + G +N +
Sbjct: 299 MLKGFCQEGMMEE---------ARSLVETMKKGGNFVS-LESYNTWLLGLLRNGKLLEGR 348
Query: 615 KLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTG 674
+L E+ E I+ ++ +N V+ C+ +M DA + + M S G P+ T+ +++ G
Sbjct: 349 SVLDEMVE-NGIEPNIYSYNIVMDGLCRNHMMLDARRLMDLMVSNGVYPDTVTYTTLLHG 407
Query: 675 YAAIGGKYTEVTELWGEM 692
Y + GK E + EM
Sbjct: 408 YCS-KGKVFEAKAILNEM 424
>gi|414887035|tpg|DAA63049.1| TPA: crs2 associated factor1 [Zea mays]
Length = 668
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/250 (22%), Positives = 109/250 (43%), Gaps = 5/250 (2%)
Query: 445 GILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWL 504
G ++P + Y L+K ++ K L E V+ D+A ++ G
Sbjct: 293 GEIKPRTRAYNALLKGYVRIASLKNAEQVL--DEMSQCGVAPDEATYSLLVDAYTRAGRW 350
Query: 505 DQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEAL 564
+ A LL EM GV+ SS V++ +L + + ++ A+LR+ +++G++ D Y +
Sbjct: 351 ESARILLKEMEADGVKPSSYVFSRILAGFRDRGDWQKAFAVLREMQASGVRPDRHFYNVM 410
Query: 565 LQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQ 624
+ + A+ F +M+E I + L+ + A+L +E++E
Sbjct: 411 IDTFGKYNCLGHAMDAFNKMREEGI-EPDVVTWNTLIDAHCKGGRHDRAAELFEEMRESN 469
Query: 625 RIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTE 684
G +N +I+ ++ + E L M+ G +PN T+ ++V Y G+Y E
Sbjct: 470 -CPPGTTTYNIMINLLGEQEHWEGVEAMLSEMKEQGLVPNIITYTTLVDVYGR-SGRYKE 527
Query: 685 VTELWGEMKS 694
+ MK+
Sbjct: 528 AIDCIEAMKA 537
Score = 55.8 bits (133), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 93/391 (23%), Positives = 156/391 (39%), Gaps = 53/391 (13%)
Query: 249 MKPNTNTFNIALAGCLLFETTRKAEQLLDIMPRIGVKADSNLLIIMAHIYERNGRREELR 308
+KP T +N L G + + + AEQ+LD M + GV D ++ Y R GR E R
Sbjct: 295 IKPRTRAYNALLKGYVRIASLKNAEQVLDEMSQCGVAPDEATYSLLVDAYTRAGRWESAR 354
Query: 309 KLQRHID-EAVNLSDIQFRQFYNCLLSCHLKFGDLNSASKMVLEMLQRAKEAR------- 360
L + ++ + V S F + +L+ GD A ++ EM +A R
Sbjct: 355 ILLKEMEADGVKPSSYVFSR----ILAGFRDRGDWQKAFAVLREM--QASGVRPDRHFYN 408
Query: 361 ---------NSLAAAMLPFNAVGVNNRTPSEQNVNCTNSVDLENSGIIENHILSYEDFTK 411
N L AM FN + P V +D G H + E F +
Sbjct: 409 VMIDTFGKYNCLGHAMDAFNKMREEGIEP--DVVTWNTLIDAHCKG--GRHDRAAELFEE 464
Query: 412 DRKFVALEAEVK-RVLQTLLGMLQ--KQVELITT---EHGILQPTEKIYIKLVKAFLEAG 465
R+ ++ LLG + + VE + + E G++ P Y LV + +G
Sbjct: 465 MRESNCPPGTTTYNIMINLLGEQEHWEGVEAMLSEMKEQGLV-PNIITYTTLVDVYGRSG 523
Query: 466 KTKELTHFLIKAEKENLQVSHDDAALGH-VITLCISLGWLDQAHDLLDEMHLAGVRASSS 524
+ KE + + + L+ S + H ++ G D A +++ M G+ S
Sbjct: 524 RYKEAIDCIEAMKADGLKPS---PTMYHALVNAYAQRGLADHALNVVKAMKADGLEVSIL 580
Query: 525 VYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEM 584
V SL+ A+ E R E ++L+ R G++ D Y L+++ L +
Sbjct: 581 VLNSLINAFGEDRRVVEAFSVLQFMRENGLRPDVITYTTLMKA------------LIRVE 628
Query: 585 KESKIPRSGHQEFEMLVKGCAQNHEAGLMAK 615
+ K+P EM+ GCA + +A M +
Sbjct: 629 QFDKVPVIYE---EMITSGCAPDRKARAMLR 656
>gi|15240991|ref|NP_198689.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171307|sp|Q9FKR3.1|PP404_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g38730
gi|10176899|dbj|BAB10131.1| unnamed protein product [Arabidopsis thaliana]
gi|332006971|gb|AED94354.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 596
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 97/205 (47%), Gaps = 14/205 (6%)
Query: 523 SSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFK 582
S V++ L+ Y +A + + RS G++ LL S + Q+ T +FK
Sbjct: 133 SHVFSWLMIYYAKAGMINDSIVVFEQIRSCGLKPHLQACTVLLNSLVKQRLTDTVWKIFK 192
Query: 583 EMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCK 642
+M + + + H + +LV C+++ + KLL E++E + + + +N +I +CK
Sbjct: 193 KMVKLGVVANIHV-YNVLVHACSKSGDPEKAEKLLSEMEE-KGVFPDIFTYNTLISVYCK 250
Query: 643 KRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEMKSFASSTSMN 702
K + +A RM G PN T++S + G++ G+ E T L+ E+K
Sbjct: 251 KSMHFEALSVQDRMERSGVAPNIVTYNSFIHGFSR-EGRMREATRLFREIK--------- 300
Query: 703 FDEELLDSVLYTFVRGGFFARANEV 727
D+ + V YT + G + R N++
Sbjct: 301 -DDVTANHVTYTTLIDG-YCRMNDI 323
Score = 47.0 bits (110), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 39/181 (21%), Positives = 78/181 (43%), Gaps = 3/181 (1%)
Query: 498 CISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLD 557
C G ++A LL EM GV Y +L+ Y + + E ++ +G+ +
Sbjct: 213 CSKSGDPEKAEKLLSEMEEKGVFPDIFTYNTLISVYCKKSMHFEALSVQDRMERSGVAPN 272
Query: 558 ASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLL 617
Y + + + A LF+E+K+ + H + L+ G + ++ A L
Sbjct: 273 IVTYNSFIHGFSREGRMREATRLFREIKDD--VTANHVTYTTLIDGYCRMNDID-EALRL 329
Query: 618 QEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAA 677
+EV E + GV +N+++ C+ +++A + L M P+ T ++++ Y
Sbjct: 330 REVMESRGFSPGVVTYNSILRKLCEDGRIREANRLLTEMSGKKIEPDNITCNTLINAYCK 389
Query: 678 I 678
I
Sbjct: 390 I 390
Score = 43.1 bits (100), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 55/256 (21%), Positives = 93/256 (36%), Gaps = 51/256 (19%)
Query: 443 EHGILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLG 502
E + P Y + F G+ +E T + + DD HV + G
Sbjct: 265 ERSGVAPNIVTYNSFIHGFSREGRMREATRLFREIK--------DDVTANHVTYTTLIDG 316
Query: 503 W-----LDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLD 557
+ +D+A L + M G Y S+L+ E R RE LL + I+ D
Sbjct: 317 YCRMNDIDEALRLREVMESRGFSPGVVTYNSILRKLCEDGRIREANRLLTEMSGKKIEPD 376
Query: 558 ASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLL 617
L+ + +D A+ + K+M ES
Sbjct: 377 NITCNTLINAYCKIEDMVSAVKVKKKMIES------------------------------ 406
Query: 618 QEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAA 677
G ++D ++ + +IH FCK +++A++ L M G P T+ +V G+
Sbjct: 407 -----GLKLD--MYSYKALIHGFCKVLELENAKEELFSMIEKGFSPGYATYSWLVDGFYN 459
Query: 678 IGGKYTEVTELWGEMK 693
K E+T+L E +
Sbjct: 460 -QNKQDEITKLLEEFE 474
>gi|224092436|ref|XP_002309609.1| predicted protein [Populus trichocarpa]
gi|222855585|gb|EEE93132.1| predicted protein [Populus trichocarpa]
Length = 841
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/239 (23%), Positives = 110/239 (46%), Gaps = 30/239 (12%)
Query: 506 QAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALL 565
+A D+ ++M GV+ + + +++A + + E R+A++ G++LDA Y ++
Sbjct: 207 EARDVYNKMASKGVKGDCATISVMIRASMREGKLEEAEGWFREAKNKGVELDARAYSIVI 266
Query: 566 QSKIVQKDTPGALHLFKEMKESK-IPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVK-EG 623
++ + D+ AL L +EM++ +P H+ V G K+L+ VK +G
Sbjct: 267 EAVCKKPDSVAALGLLREMRDKGWVP---HEVIFTRVIGVCMKQ-----GKMLEAVKVKG 318
Query: 624 QRIDCG----VHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIG 679
+ + CG V ++ +CK+ + A + +M G PN T+ +++ +
Sbjct: 319 EMLSCGKPMNVVVATTLMKGYCKQGDLDSALELFDKMNENGICPNNVTY-AVIIEWCCKN 377
Query: 680 GKYTEVTELWGEMKS-FASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMF 737
G + E++ +MK+ S T N + + +RG AR+ E E K+F
Sbjct: 378 GNMDKAYEIYNQMKNKDISPTVFNVN---------SLIRGYLKARSPE-----EASKLF 422
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 70/349 (20%), Positives = 150/349 (42%), Gaps = 28/349 (8%)
Query: 329 YNCLLSCHLKFGDLNSASKMVLEMLQRAKEARNSLAAAMLPFNAV--GVNNRTPSEQNVN 386
YN ++ H + GD++SA+ + +EML++ L ++ ++ + G + +E
Sbjct: 471 YNNMILGHCQQGDMDSANGVFVEMLEKG------LKPNLITYSVLMDGYFKKGDTEYAFG 524
Query: 387 CTNSVDLENSGIIENHILSYEDFTKDRKFVALEAEVKRVLQTLLGMLQKQVELITTEHGI 446
+ + EN ++ DFT + L + R ++ Q +++ + E I
Sbjct: 525 LYDRMRGEN--------IAPSDFTCNIIINGL-CKAGRTSES-----QDRLKKLVQEGFI 570
Query: 447 LQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQ 506
PT Y ++ F++ G + + E + VS + ++I +D
Sbjct: 571 --PTCMTYNCIIDGFVKEGSVN--SALAVYTEMCKIGVSPNVFTYTNLINGFCKSNNMDL 626
Query: 507 AHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQ 566
A ++DEM G+ +VY +L+ + + LL + + G+ + Y +++
Sbjct: 627 ALKVMDEMKNKGIELDVTVYCALIDGFCRKGDMVNASQLLSELQEVGLSPNKVVYSSMIS 686
Query: 567 SKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRI 626
++ ALHL K M IP Q + L+ G + + ++L E+ + I
Sbjct: 687 GFRKLQNMEAALHLHKRMINEGIP-CDLQIYTTLISGLLKEGKLLFASELYAEML-AKGI 744
Query: 627 DCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGY 675
+ ++ +IH C K +++A+K L+ M P +++++TG+
Sbjct: 745 MPDLITYSVLIHGLCNKGQLENAQKILEDMDRKCMTPTVFIYNTLITGH 793
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 70/409 (17%), Positives = 155/409 (37%), Gaps = 71/409 (17%)
Query: 411 KDRKFVALEAEVKRVLQTLLGMLQKQVELITTEHGILQPTEKIYI----KLVKAFLEAGK 466
+D+ +V E RV+ + K +E + + +L + + + L+K + + G
Sbjct: 286 RDKGWVPHEVIFTRVIGVCMKQ-GKMLEAVKVKGEMLSCGKPMNVVVATTLMKGYCKQGD 344
Query: 467 TKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVY 526
K + + ++ +I C G +D+A+++ ++M + +
Sbjct: 345 LDSALELFDKMNENG--ICPNNVTYAVIIEWCCKNGNMDKAYEIYNQMKNKDISPTVFNV 402
Query: 527 ASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKE 586
SL++ Y++A P E + L +A + GI + Y +LL + A ++++M
Sbjct: 403 NSLIRGYLKARSPEEASKLFDEAVACGIA-NVFTYNSLLSWLCKEGKMSEACSIWEKMVR 461
Query: 587 SKIPRSGHQEFEMLVKGCAQNH------------EAGLMAKL------------------ 616
+ S M++ C Q E GL L
Sbjct: 462 KGVRPSVVSYNNMILGHCQQGDMDSANGVFVEMLEKGLKPNLITYSVLMDGYFKKGDTEY 521
Query: 617 ---LQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVT 673
L + G+ I N +I+ CK +++ LK++ G +P T++ ++
Sbjct: 522 AFGLYDRMRGENIAPSDFTCNIIINGLCKAGRTSESQDRLKKLVQEGFIPTCMTYNCIID 581
Query: 674 GYAAIG------GKYTEVTELWGE---------MKSFASSTSMNFDEELLD--------- 709
G+ G YTE+ ++ + F S +M+ +++D
Sbjct: 582 GFVKEGSVNSALAVYTEMCKIGVSPNVFTYTNLINGFCKSNNMDLALKVMDEMKNKGIEL 641
Query: 710 ------SVLYTFVRGGFFARANEVVAMMEEGKMFIDKYKYRTLFLKYHK 752
+++ F R G A+++++ ++E + +K Y ++ + K
Sbjct: 642 DVTVYCALIDGFCRKGDMVNASQLLSELQEVGLSPNKVVYSSMISGFRK 690
>gi|255572426|ref|XP_002527150.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223533489|gb|EEF35232.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 874
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 102/472 (21%), Positives = 181/472 (38%), Gaps = 51/472 (10%)
Query: 247 IAMKPNTNTFNIALAGCLLFETTRKAEQLLDIMPRIGVKADSNLLIIMAHIYERNGRREE 306
I ++P+ ++NI + G A L+ +M R G+ D+ + H Y G+ E
Sbjct: 355 IGIEPDIYSYNIVMDGLCKNGMLSDARMLMGLMIRNGILPDTVTYSTLLHGYCSKGKVFE 414
Query: 307 LRKLQRHIDEAVNLSDIQFRQFYNC--LLSCHLKFGDLNSASKMVLEMLQRAKEARNSLA 364
L + +S+ Y C LL K G ++ A ++ +M ++
Sbjct: 415 ANNLLHEM-----ISNNCSPNTYTCNVLLHSLWKEGRISEAENLLQKMNEKGYGV--DTV 467
Query: 365 AAMLPFNAVGVNNRTPSEQNVNCTNSVDLENSGIIENHILSY----EDFTKDRKFVALEA 420
+ NA+ N + ++ + N + S + N S+ +D +K
Sbjct: 468 TCNIIINALCNNGQL--DKAIEIVNGMWTHGSAALGNLGNSFIGLVDDTISGKKCTPDLV 525
Query: 421 EVKRVLQTLL--GML----QKQVELITTEHGILQPTEKIYIKLVKAFLEAGKTKELTHFL 474
++ L G L +K +E+++ LQP IY + +F GK L
Sbjct: 526 TYSTIISGLCKAGRLDDAKKKFIEMMSKG---LQPDSAIYDTFIHSFCREGKISSAFQVL 582
Query: 475 IKAEKENLQVSHDDAALGHVITLCISLGWLDQA---HDLLDEMHLAGVRASSSVYASLLK 531
EK + L +L + LG +Q + L+DEM GV Y +L
Sbjct: 583 KDMEKRGC-----NKTLQTYNSLILGLGSKNQIFELYGLIDEMREKGVSPDVCTYNHMLN 637
Query: 532 AYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPR 591
E R + ++L + GI + S + L+++ D + +F E +
Sbjct: 638 CLCEGGRINDAPSVLDEMLQKGISPNISSFRILIKAFCKACDFKASHEVF----EIALNV 693
Query: 592 SGHQEF-------EMLVKGCAQNHEAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKR 644
GH+E E+LV G AK L E + D G + ++I CK
Sbjct: 694 CGHKEALYTLMFNELLVGGKVAE------AKELFETALDRSFDIGNFLYKDLIDRLCKDE 747
Query: 645 LMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYT--EVTELWGEMKS 694
++ A L R+ G+ + +F ++ G+ +G K+ E+ E EM S
Sbjct: 748 KLEAASDVLHRLIDKGYQFDPASFMPVIDGFGKMGNKHVADELAERMMEMAS 799
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 106/241 (43%), Gaps = 37/241 (15%)
Query: 520 RASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALH 579
+ S +Y LLK+ I NR V+ L +D A + +A + L+ A
Sbjct: 109 QPSIYLYNVLLKSCIRENRVELVSWLYKDMVLARVSPEAYTFNLLIGLLCDSGHLEDARE 168
Query: 580 LFKEMKESKIPRSGHQ----EFEMLVKGCAQNHEAGLMAKLLQEVKEGQRIDCGVHD--- 632
LF K+P G + F +LV+G + AGL +K L+ + GQ G+
Sbjct: 169 LF-----DKMPARGCEPNEFTFGILVRGYCR---AGLASKGLELL--GQMRTMGILPNNV 218
Query: 633 -WNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGE 691
+N +I FCK+ DAEK + +MR G +P+ +TF+S ++ GK E + ++ +
Sbjct: 219 LYNTLISSFCKEGKTHDAEKLVDKMREDGLVPHVETFNSRISALCG-SGKILEASRIFRD 277
Query: 692 MKSFASSTSMNFDEEL----LDSVLYTFVRGGFFARANEVVAMMEEGKMFIDKYKYRTLF 747
M+ DEEL + + Y + GF M+EE K +D K F
Sbjct: 278 MQ---------IDEELGLPHPNVITYKLMLMGFCKE-----GMLEEAKTLVDTMKRNANF 323
Query: 748 L 748
+
Sbjct: 324 I 324
Score = 48.1 bits (113), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 49/266 (18%), Positives = 114/266 (42%), Gaps = 22/266 (8%)
Query: 485 SHDDAALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSV--YASLLKAYIEANRPREV 542
+H AALG++ I G +D ++G + + + Y++++ +A R +
Sbjct: 494 THGSAALGNLGNSFI--GLVDDT--------ISGKKCTPDLVTYSTIISGLCKAGRLDDA 543
Query: 543 TALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVK 602
+ S G+Q D++ Y+ + S + A + K+M++ ++ Q + L+
Sbjct: 544 KKKFIEMMSKGLQPDSAIYDTFIHSFCREGKISSAFQVLKDMEKRGCNKT-LQTYNSLIL 602
Query: 603 GCAQNHEAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHL 662
G ++ + L+ E++E + + V +N++++ C+ + DA L M G
Sbjct: 603 GLGSKNQIFELYGLIDEMRE-KGVSPDVCTYNHMLNCLCEGGRINDAPSVLDEMLQKGIS 661
Query: 663 PNAQTFHSMVTGYAAIGGKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYT-FVRGGFF 721
PN +F ++ + + + + F + ++ +E L ++++ + GG
Sbjct: 662 PNISSFRILIKAFC-------KACDFKASHEVFEIALNVCGHKEALYTLMFNELLVGGKV 714
Query: 722 ARANEVVAMMEEGKMFIDKYKYRTLF 747
A A E+ + I + Y+ L
Sbjct: 715 AEAKELFETALDRSFDIGNFLYKDLI 740
Score = 41.6 bits (96), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 55/275 (20%), Positives = 114/275 (41%), Gaps = 42/275 (15%)
Query: 502 GWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCY 561
G + +LL +M G+ ++ +Y +L+ ++ + + + L+ R G+ +
Sbjct: 196 GLASKGLELLGQMRTMGILPNNVLYNTLISSFCKEGKTHDAEKLVDKMREDGLVPHVETF 255
Query: 562 EALLQSKIVQKDTPGALHLFKEMK---ESKIPRSGHQEFEMLVKG-CAQ----------- 606
+ + + A +F++M+ E +P +++++ G C +
Sbjct: 256 NSRISALCGSGKILEASRIFRDMQIDEELGLPHPNVITYKLMLMGFCKEGMLEEAKTLVD 315
Query: 607 ---------NHEA------GLM--AKLLQE---VKE--GQRIDCGVHDWNNVIHFFCKKR 644
N E+ GL+ KLL+ +KE G I+ ++ +N V+ CK
Sbjct: 316 TMKRNANFINLESYNIWLLGLIRNGKLLEAWIVLKEMLGIGIEPDIYSYNIVMDGLCKNG 375
Query: 645 LMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEMKSFASSTSMNFD 704
++ DA + M G LP+ T+ +++ GY + GK E L EM S S +
Sbjct: 376 MLSDARMLMGLMIRNGILPDTVTYSTLLHGYCS-KGKVFEANNLLHEMISNNCSP----N 430
Query: 705 EELLDSVLYTFVRGGFFARANEVVAMMEEGKMFID 739
+ +L++ + G + A ++ M E +D
Sbjct: 431 TYTCNVLLHSLWKEGRISEAENLLQKMNEKGYGVD 465
>gi|356561685|ref|XP_003549110.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12775,
mitochondrial-like [Glycine max]
Length = 477
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/242 (22%), Positives = 108/242 (44%), Gaps = 7/242 (2%)
Query: 454 YIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLG-WLDQAHDLLD 512
Y L+ +AG+TK + L K E +++ D + I C+ + A DL
Sbjct: 201 YGTLINGLCKAGETKAVARLLRKLEGHSVK---PDVVMYTTIIHCLCKNKRVGDACDLYS 257
Query: 513 EMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQK 572
EM + G+ + Y +L+ + +E +LL + + I D + L+ + +
Sbjct: 258 EMIVKGISPNVFTYNTLIYGFCIMGNLKEAFSLLNEMKLKNINPDVYTFNILIDALGKEG 317
Query: 573 DTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRIDCGVHD 632
A+ LF+EMK + + L+ G +NH L +++KE Q I V+
Sbjct: 318 KIDEAISLFEEMKHKNM-FPNIVTYTSLIDGLCKNHHLERAIALCKKMKE-QGIQPDVYS 375
Query: 633 WNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEM 692
+ ++ CK +++A++ + + G+ N +T++ M+ G G + +V +L +M
Sbjct: 376 YTILLDALCKGGRLENAKQFFQHLLVKGYHLNVRTYNVMINGLCK-AGLFGDVMDLKSKM 434
Query: 693 KS 694
+
Sbjct: 435 EG 436
Score = 48.1 bits (113), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 56/239 (23%), Positives = 98/239 (41%), Gaps = 41/239 (17%)
Query: 515 HLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQKDT 574
HLA + + SV+A++LK G DA L++ +
Sbjct: 140 HLAHITFAFSVFANILKR--------------------GYHPDAITLNTLIKGLCFCGEI 179
Query: 575 PGALHLFKEMKESKIPRSGHQ----EFEMLVKGCAQNHEAGLMAKLLQEVKEGQRIDCGV 630
AL+ K+ G Q + L+ G + E +A+LL+++ EG + V
Sbjct: 180 KRALYF-----HDKVVAQGFQLDQVSYGTLINGLCKAGETKAVARLLRKL-EGHSVKPDV 233
Query: 631 HDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWG 690
+ +IH CK + + DA M G PN T+++++ G+ I G E L
Sbjct: 234 VMYTTIIHCLCKNKRVGDACDLYSEMIVKGISPNVFTYNTLIYGF-CIMGNLKEAFSLLN 292
Query: 691 EMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGK---MFIDKYKYRTL 746
EMK ++N D + ++ + G + +E +++ EE K MF + Y +L
Sbjct: 293 EMK----LKNINPDVYTFNILIDALGKEG---KIDEAISLFEEMKHKNMFPNIVTYTSL 344
>gi|255556314|ref|XP_002519191.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223541506|gb|EEF43055.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 719
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/241 (22%), Positives = 104/241 (43%), Gaps = 5/241 (2%)
Query: 454 YIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQAHDLLDE 513
Y+ L+KA AGK E H+ + K+ L + + VI +D+A + E
Sbjct: 430 YLALIKALYMAGKVTEGNHYFNQMVKDGLLC--NVCSYNMVIDCFCKTSMMDKATNTFKE 487
Query: 514 MHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQKD 573
M G+ + + +L+ Y + + LL G + D + +++ K
Sbjct: 488 MQYKGIPPNLVTFNTLIDGYCKGGEICKSRDLLVMLLEHGFKPDIFTFSSIIDGLCRAKQ 547
Query: 574 TPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRIDCGVHDW 633
AL F EM + + + +L+ + KLL+++ + I+ V +
Sbjct: 548 IEDALGCFSEMVMWGLSPNA-VTYNILIHSLCIIGDVPRSMKLLRKM-QTDGINPDVFSF 605
Query: 634 NNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEMK 693
N +I FC+ ++DA+K M SLG +P+ T+ + + + G++ E EL+ M+
Sbjct: 606 NALIQSFCRMGKVEDAKKLFSSMLSLGLIPDNYTYVAFIKVFCQ-SGRFNEAKELFLSME 664
Query: 694 S 694
+
Sbjct: 665 A 665
Score = 52.8 bits (125), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 65/265 (24%), Positives = 106/265 (40%), Gaps = 18/265 (6%)
Query: 431 GMLQKQVELITTEHGI-LQPTEKIYIKLVKAFLEAGKTKELTHFL--IKAEKENLQVSHD 487
G++ + + L+ G+ P Y L+ F A K E L +KA K VS
Sbjct: 266 GVVDEALRLVKQMEGLGYSPNVFTYTILIDGFFNAKKVDEAFRVLETMKARK----VSPS 321
Query: 488 DAALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLR 547
+A + I ++A +L E +LL N RE ALL+
Sbjct: 322 EATIRSFIHGVFRCVAPNKAFELAIEFIEREPVLQRLACDTLLCCLSSKNMAREAGALLK 381
Query: 548 DARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQN 607
G + D++ + + I D ++ E + + G + L+K
Sbjct: 382 KFGKIGHKPDSATFNIAMNCLIKGFDLNEVCNILDRFVEQGM-KFGFSTYLALIKAL--- 437
Query: 608 HEAGLMAK----LLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLP 663
+ AG + + Q VK+G + C V +N VI FCK +M A K M+ G P
Sbjct: 438 YMAGKVTEGNHYFNQMVKDG--LLCNVCSYNMVIDCFCKTSMMDKATNTFKEMQYKGIPP 495
Query: 664 NAQTFHSMVTGYAAIGGKYTEVTEL 688
N TF++++ GY GG+ + +L
Sbjct: 496 NLVTFNTLIDGYCK-GGEICKSRDL 519
>gi|357122970|ref|XP_003563186.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
mitochondrial-like [Brachypodium distachyon]
Length = 675
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 74/384 (19%), Positives = 153/384 (39%), Gaps = 60/384 (15%)
Query: 445 GILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWL 504
G ++P + Y L+K +++ G K L E + V+ D+A ++ G
Sbjct: 300 GEIKPRTRAYNALLKGYVKIGSLKNAEQVL--DEMSDCGVAPDEATYSLLVDAYTRAGRW 357
Query: 505 DQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEAL 564
+ A LL EM GV+ SS V++ +L + + ++ A+LR+ ++G+Q D Y +
Sbjct: 358 ESARILLKEMEADGVKPSSYVFSRILAGFRDRGDWQKAFAVLREMHASGVQPDRHFYNVM 417
Query: 565 LQS------------------------------KIVQKDTPGALH-----LFKEMKESKI 589
+ + ++ G H LF+EM+ES
Sbjct: 418 IDTFGKYNCLGHAMDAFNRMREEGIEPDVVTWNTLIDAHRKGGRHDRAMELFEEMRESNC 477
Query: 590 PRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDA 649
P G + +++ + + +L E+KE Q + + + ++ + + ++A
Sbjct: 478 P-PGTTTYNIMINLLGEQERWVGVETMLSEMKE-QGLVPNIITYTTLVDVYGRSGRFKEA 535
Query: 650 EKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEMKSFASSTSMNFDEELLD 709
+ ++ M++ G P+ +H++V YA G + + + + + +L+
Sbjct: 536 IECIEVMKADGLKPSPTMYHALVNAYAQRG-----LADHALNVVKAMRADGLEASTVVLN 590
Query: 710 SVLYTFVRGGFFARANEVVAMMEEGKMFIDKYKYRTLF-------------LKYHKTLYK 756
S++ F A V+ M+E + D Y TL + Y + +
Sbjct: 591 SLMNAFGEDRRVVEAFSVLQFMKENDLRPDVITYTTLMKALIRIEQFDKVPVIYEEMITS 650
Query: 757 GKTPKFQTEAQLKKREAALGFKKW 780
G P + A L+ +AL + K+
Sbjct: 651 GCAPDRKARAMLR---SALRYMKY 671
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 92/389 (23%), Positives = 157/389 (40%), Gaps = 49/389 (12%)
Query: 249 MKPNTNTFNIALAGCLLFETTRKAEQLLDIMPRIGVKADSNLLIIMAHIYERNGRREELR 308
+KP T +N L G + + + AEQ+LD M GV D ++ Y R GR E R
Sbjct: 302 IKPRTRAYNALLKGYVKIGSLKNAEQVLDEMSDCGVAPDEATYSLLVDAYTRAGRWESAR 361
Query: 309 KLQRHID-EAVNLSDIQFRQFYNCLLSCHLKFGDLNSASKMVLEM----LQRAKEARNSL 363
L + ++ + V S F + +L+ GD A ++ EM +Q + N +
Sbjct: 362 ILLKEMEADGVKPSSYVFSR----ILAGFRDRGDWQKAFAVLREMHASGVQPDRHFYNVM 417
Query: 364 AAAMLPFNAVG----VNNRTPSE----QNVNCTNSVDLENSGIIENHILSYEDFTKDRKF 415
+N +G NR E V +D G H + E F + R+
Sbjct: 418 IDTFGKYNCLGHAMDAFNRMREEGIEPDVVTWNTLIDAHRKG--GRHDRAMELFEEMRES 475
Query: 416 VALEAEVK-RVLQTLLGMLQKQVELITT-----EHGILQPTEKIYIKLVKAFLEAGKTKE 469
++ LLG ++ V + T E G++ P Y LV + +G+ KE
Sbjct: 476 NCPPGTTTYNIMINLLGEQERWVGVETMLSEMKEQGLV-PNIITYTTLVDVYGRSGRFKE 534
Query: 470 LTHFLIKAEKENLQVSHDDAALGH-VITLCISLGWLDQAHDLLDEMHLAGVRASSSVYAS 528
+ + + L+ S + H ++ G D A +++ M G+ AS+ V S
Sbjct: 535 AIECIEVMKADGLKPS---PTMYHALVNAYAQRGLADHALNVVKAMRADGLEASTVVLNS 591
Query: 529 LLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQS--KIVQKDTPGALHLFKEMKE 586
L+ A+ E R E ++L+ + ++ D Y L+++ +I Q D
Sbjct: 592 LMNAFGEDRRVVEAFSVLQFMKENDLRPDVITYTTLMKALIRIEQFD------------- 638
Query: 587 SKIPRSGHQEFEMLVKGCAQNHEAGLMAK 615
K+P EM+ GCA + +A M +
Sbjct: 639 -KVPVIYE---EMITSGCAPDRKARAMLR 663
>gi|125559009|gb|EAZ04545.1| hypothetical protein OsI_26694 [Oryza sativa Indica Group]
Length = 784
Score = 63.9 bits (154), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 71/310 (22%), Positives = 125/310 (40%), Gaps = 39/310 (12%)
Query: 474 LIKAEKENLQVSHDDAALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAY 533
L+ + KE+ V+ D +I+ C +A + DEM +G + SLL Y
Sbjct: 230 LVASMKEH-GVAPDRYTYNTLISCCRRRALYKEAAQVFDEMKASGFEPDKVTFNSLLDVY 288
Query: 534 IEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKE------- 586
+A R E ++++ G Y +L+ S + A+ L +EM+
Sbjct: 289 GKARRHDEAIEVIQEMERVGCPPSVVTYNSLISSYVKDGLLEQAVALKQEMEVKGIKPDV 348
Query: 587 -------SKIPRSGHQEF------EMLVKGCAQN---HEA-----GLMAKL--LQEVKEG 623
S + R+G + EM+ GC N + A G+ K + V +
Sbjct: 349 VTYTTLISGLDRAGKIDAAIVEYDEMVRNGCKPNLCTYNALIKMHGVRGKFPEMMAVFDE 408
Query: 624 QRIDCGVHD---WNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGG 680
R V D WN ++ F + L + K M+ G++P T+ S+++ Y+ G
Sbjct: 409 LRSAGFVPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKKAGYIPERDTYVSLISSYSRCG- 467
Query: 681 KYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFIDK 740
+ +L ++ + D ++VL RGG + +A ++ A MEE D+
Sbjct: 468 ----LFDLAMQIYKRMMEAGIYPDVSTYNAVLSALARGGRWEQAEKLFAEMEERDCKPDE 523
Query: 741 YKYRTLFLKY 750
Y Y +L Y
Sbjct: 524 YSYSSLLHAY 533
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 102/519 (19%), Positives = 201/519 (38%), Gaps = 67/519 (12%)
Query: 248 AMKPNTNTFNIALAGCLLFETTRKAEQLLDIMPRIGVKADSNLLIIMAHIYERNGRREEL 307
+ P+ T+N ++ C ++A Q+ D M G + D + +Y + R +E
Sbjct: 238 GVAPDRYTYNTLISCCRRRALYKEAAQVFDEMKASGFEPDKVTFNSLLDVYGKARRHDEA 297
Query: 308 RKLQRHIDEAVNLSDIQFRQFYNCLLSCHLKFGDLNSASKMVLEM--------------- 352
++ + ++ + YN L+S ++K G L A + EM
Sbjct: 298 IEVIQEMERVGCPPSVVT---YNSLISSYVKDGLLEQAVALKQEMEVKGIKPDVVTYTTL 354
Query: 353 ---LQRAKE-----------ARNSLAAAMLPFNAV----GVNNRTPSEQNVNCTNSVDLE 394
L RA + RN + +NA+ GV + P V +L
Sbjct: 355 ISGLDRAGKIDAAIVEYDEMVRNGCKPNLCTYNALIKMHGVRGKFPEMMAV----FDELR 410
Query: 395 NSGIIENHILSYEDFTKDRKFVALEAEVKRVLQTLLGMLQKQVELITTEHGILQPTEKIY 454
++G + + I+++ L++EV V + + K+ I P Y
Sbjct: 411 SAGFVPD-IVTWNTLLAVFGQNGLDSEVSGVFKEM-----KKAGYI--------PERDTY 456
Query: 455 IKLVKAFLEAGKTKELTHFLIKAEKENLQ--VSHDDAALGHVITLCISLGWLDQAHDLLD 512
+ L+ ++ G L ++ K ++ + D + V++ G +QA L
Sbjct: 457 VSLISSYSRCG----LFDLAMQIYKRMMEAGIYPDVSTYNAVLSALARGGRWEQAEKLFA 512
Query: 513 EMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQK 572
EM + Y+SLL AY A R ++ AL D S I+ + L+
Sbjct: 513 EMEERDCKPDEYSYSSLLHAYANAKRLDKMKALSDDIYSERIEPHNWLVKTLVLVNSKVN 572
Query: 573 DTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRIDCGVHD 632
+ A F E+++ + + +V +N + K+L +KE I+
Sbjct: 573 NLAEAEKAFLELRQKRCSLDINV-LNAMVSIYGKNRMVRKVEKILSLMKESA-INLSAAT 630
Query: 633 WNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEM 692
+N+++H + + + E L ++S G P+ ++++++ Y G+ E + L+ EM
Sbjct: 631 YNSLMHMYSRLGDCEKCENILTEIKSSGVRPDRYSYNTVIYAYGR-KGQMKEASRLFSEM 689
Query: 693 KSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMM 731
K + + D + + ++V F A E+V M
Sbjct: 690 K----CSGLKPDVVTYNIFVKSYVSNSMFEEAIELVRYM 724
Score = 42.7 bits (99), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 57/241 (23%), Positives = 101/241 (41%), Gaps = 22/241 (9%)
Query: 513 EMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQK 572
E+H GV V A+ ++ A R E +ALL A DA Y AL+ +
Sbjct: 131 ELHGEGVLHHPRVLATAIRVMARAGRLAEASALL----DAAPGPDAGAYTALVSAFSRAG 186
Query: 573 DTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKE--GQRIDCGV 630
A+ +F+ M +S + + +V H MA +EV E + GV
Sbjct: 187 RFRDAVAVFRRMVDSGVQPA-------IVTYNVVLHVYSKMAVPWKEVVELVASMKEHGV 239
Query: 631 ----HDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVT 686
+ +N +I ++ L ++A + M++ G P+ TF+S++ Y ++ E
Sbjct: 240 APDRYTYNTLISCCRRRALYKEAAQVFDEMKASGFEPDKVTFNSLLDVYGK-ARRHDEAI 298
Query: 687 ELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFIDKYKYRTL 746
E+ EM+ S+ +S++ ++V+ G +A + ME + D Y TL
Sbjct: 299 EVIQEMERVGCPPSV----VTYNSLISSYVKDGLLEQAVALKQEMEVKGIKPDVVTYTTL 354
Query: 747 F 747
Sbjct: 355 I 355
Score = 42.4 bits (98), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 53/253 (20%), Positives = 100/253 (39%), Gaps = 11/253 (4%)
Query: 502 GWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCY 561
G + + EM AG Y SL+ +Y + + AGI D S Y
Sbjct: 432 GLDSEVSGVFKEMKKAGYIPERDTYVSLISSYSRCGLFDLAMQIYKRMMEAGIYPDVSTY 491
Query: 562 EALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVK 621
A+L + A LF EM+E + + L+ A M L ++
Sbjct: 492 NAVLSALARGGRWEQAEKLFAEMEERDC-KPDEYSYSSLLHAYANAKRLDKMKALSDDIY 550
Query: 622 EGQRIDCGVHDW--NNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIG 679
+RI+ H+W ++ K + +AEKA +R + ++MV+ Y
Sbjct: 551 -SERIE--PHNWLVKTLVLVNSKVNNLAEAEKAFLELRQKRCSLDINVLNAMVSIY---- 603
Query: 680 GKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFID 739
GK V ++ ++ S +++N +S+++ + R G + ++ ++ + D
Sbjct: 604 GKNRMVRKVE-KILSLMKESAINLSAATYNSLMHMYSRLGDCEKCENILTEIKSSGVRPD 662
Query: 740 KYKYRTLFLKYHK 752
+Y Y T+ Y +
Sbjct: 663 RYSYNTVIYAYGR 675
Score = 40.4 bits (93), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 35/162 (21%), Positives = 75/162 (46%), Gaps = 5/162 (3%)
Query: 524 SVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKE 583
+V +++ Y + R+V +L + + I L A+ Y +L+ D ++ E
Sbjct: 594 NVLNAMVSIYGKNRMVRKVEKILSLMKESAINLSAATYNSLMHMYSRLGDCEKCENILTE 653
Query: 584 MKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVK-EGQRIDCGVHDWNNVIHFFCK 642
+K S + R + ++ + + ++L E+K G + D V +N + +
Sbjct: 654 IKSSGV-RPDRYSYNTVIYAYGRKGQMKEASRLFSEMKCSGLKPD--VVTYNIFVKSYVS 710
Query: 643 KRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTE 684
+ ++A + ++ M + G PN +T++S+V GY GK T+
Sbjct: 711 NSMFEEAIELVRYMVTQGCKPNERTYNSIVEGYCR-NGKLTD 751
>gi|356529513|ref|XP_003533335.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
mitochondrial-like [Glycine max]
Length = 794
Score = 63.9 bits (154), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 82/171 (47%), Gaps = 4/171 (2%)
Query: 503 WLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYE 562
+D+A +L EMH + + Y+SL+ ++ R V L+ + R G D Y
Sbjct: 602 MVDEALNLFKEMHQKNMVPDTVTYSSLVDGLCKSGRISYVWDLIDEMRDRGQPADVITYN 661
Query: 563 ALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQE-VK 621
+L+ A+ LF +MK+ I R F +L+ G + ++ Q+ +
Sbjct: 662 SLIDGLCKNGHLDKAIALFNKMKDQGI-RPNTFTFTILLDGLCKGGRLKDAQEVFQDLLT 720
Query: 622 EGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMV 672
+G +D V+ +N +I+ CK+ L+++A L +M G +PNA TF ++
Sbjct: 721 KGYHLD--VYIYNVMIYGHCKQGLLEEALTMLSKMEENGCIPNAVTFDIII 769
Score = 59.3 bits (142), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 53/234 (22%), Positives = 103/234 (44%), Gaps = 11/234 (4%)
Query: 502 GWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCY 561
G + +A +L M A V+ Y +L+ Y+ ++ + G+ D Y
Sbjct: 531 GKVKEAKSVLAVMLKACVKPDVFTYNTLMNGYLLVYEVKKAQHVFNAMSLMGVTPDVHTY 590
Query: 562 EALLQSKIVQKDTPGALHLFKEM-KESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEV 620
L+ K AL+LFKEM +++ +P + + LV G ++ + L+ E+
Sbjct: 591 TILINGFCKSKMVDEALNLFKEMHQKNMVPDT--VTYSSLVDGLCKSGRISYVWDLIDEM 648
Query: 621 KE-GQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIG 679
++ GQ D V +N++I CK + A +M+ G PN TF ++ G G
Sbjct: 649 RDRGQPAD--VITYNSLIDGLCKNGHLDKAIALFNKMKDQGIRPNTFTFTILLDGLCK-G 705
Query: 680 GKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEE 733
G+ + E++ ++ + + D + + ++Y + G A +++ MEE
Sbjct: 706 GRLKDAQEVFQDL----LTKGYHLDVYIYNVMIYGHCKQGLLEEALTMLSKMEE 755
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/222 (22%), Positives = 90/222 (40%), Gaps = 31/222 (13%)
Query: 504 LDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEA 563
+ +A+ L EM + G+ A Y++L+ + + +E LL + I D Y
Sbjct: 463 VSEAYGLFSEMTVKGISADVVTYSTLIYGFCIVGKLKEAIGLLNEMVLKTINPDVRTYTI 522
Query: 564 LLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQ----NHEAGLMAKLL-Q 618
L+ D G KE K+ + +++K C + + + LL
Sbjct: 523 LV-------DALG--------KEGKV-KEAKSVLAVMLKACVKPDVFTYNTLMNGYLLVY 566
Query: 619 EVKEGQRI---------DCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFH 669
EVK+ Q + VH + +I+ FCK +++ +A K M +P+ T+
Sbjct: 567 EVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKSKMVDEALNLFKEMHQKNMVPDTVTYS 626
Query: 670 SMVTGYAAIGGKYTEVTELWGEMKSFASSTSMNFDEELLDSV 711
S+V G G+ + V +L EM+ + L+D +
Sbjct: 627 SLVDGLCK-SGRISYVWDLIDEMRDRGQPADVITYNSLIDGL 667
Score = 40.8 bits (94), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 28/120 (23%), Positives = 56/120 (46%), Gaps = 3/120 (2%)
Query: 502 GWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCY 561
G LD+A L ++M G+R ++ + LL + R ++ + +D + G LD Y
Sbjct: 671 GHLDKAIALFNKMKDQGIRPNTFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLDVYIY 730
Query: 562 EALLQSKIVQKDTPGALHLFKEMKESK-IPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEV 620
++ Q AL + +M+E+ IP + F++++ + E KLL+++
Sbjct: 731 NVMIYGHCKQGLLEEALTMLSKMEENGCIPNA--VTFDIIINALFKKDENDKAEKLLRQM 788
Score = 39.3 bits (90), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 37/178 (20%), Positives = 72/178 (40%), Gaps = 3/178 (1%)
Query: 502 GWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCY 561
G + +A +L M A V+++ Y++L+ Y ++ + G+ D Y
Sbjct: 217 GKVKEAKSVLAVMLKACVKSNVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHSY 276
Query: 562 EALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVK 621
++ K AL+LFKEM S+ P +F ++ A+ L +
Sbjct: 277 NIMINGFCKIKRVDKALNLFKEMILSRFPPI--IQFNKILDSFAKMKHYSTAVSLSHRL- 333
Query: 622 EGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIG 679
E + I + N +I+ FC + L ++ G+ P+ T ++++ G G
Sbjct: 334 ELKGIQPDLFTLNILINCFCHMGQITFGFSVLAKILKRGYPPSTVTLNTLIKGLCLKG 391
>gi|356508736|ref|XP_003523110.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
mitochondrial-like [Glycine max]
Length = 680
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/261 (22%), Positives = 123/261 (47%), Gaps = 8/261 (3%)
Query: 443 EHGILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLG 502
E+G L+P + Y L+K ++ G K+ F++ +E E V D+ +I + G
Sbjct: 304 ENG-LEPRTRAYNALLKGYVRTGSLKD-AEFVV-SEMEKAGVKPDEQTYSLLIDVYAHAG 360
Query: 503 WLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYE 562
+ A +L EM + V+ +S V++ +L Y + ++ +L+D +S+G+Q D Y
Sbjct: 361 RWESARIVLKEMEASNVQPNSYVFSRILANYRDKGEWQKSFQVLKDMKSSGVQPDRHFYN 420
Query: 563 ALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKE 622
++ + A+ F+ M IP + L+ ++ + +L E+++
Sbjct: 421 VMIDTFGKYNCLDHAMATFERMLSEGIP-PDIVTWNTLIDCHCKSGRHDMAEELFSEMQQ 479
Query: 623 GQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKY 682
C + +N +I+ +++ + L +M+S G PN+ T+ ++V Y G++
Sbjct: 480 RGYSPC-ITTYNIMINSMGEQQRWEQVTAFLSKMQSQGLQPNSITYTTLVDVYGK-SGRF 537
Query: 683 TEVTELWGEMKS--FASSTSM 701
++ E +KS F +++M
Sbjct: 538 SDAIECLEVLKSTGFKPTSTM 558
Score = 53.9 bits (128), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 56/252 (22%), Positives = 105/252 (41%), Gaps = 15/252 (5%)
Query: 450 TEKIYIK------LVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGW 503
T+KI I ++ F +AG FL A+ L + + L VI + G
Sbjct: 234 TDKIEIDGHLMNDIIVGFSKAGDPTRAMRFLAMAQSNGL--NPKPSTLVAVILALGNSGR 291
Query: 504 LDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEA 563
+A L +E+ G+ + Y +LLK Y+ ++ ++ + AG++ D Y
Sbjct: 292 THEAEALFEEIRENGLEPRTRAYNALLKGYVRTGSLKDAEFVVSEMEKAGVKPDEQTYSL 351
Query: 564 LLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKE- 622
L+ A + KEM+ S + + + + + A + G K Q +K+
Sbjct: 352 LIDVYAHAGRWESARIVLKEMEASNVQPNSY----VFSRILANYRDKGEWQKSFQVLKDM 407
Query: 623 -GQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGK 681
+ H +N +I F K + A +RM S G P+ T+++++ + G+
Sbjct: 408 KSSGVQPDRHFYNVMIDTFGKYNCLDHAMATFERMLSEGIPPDIVTWNTLIDCHCK-SGR 466
Query: 682 YTEVTELWGEMK 693
+ EL+ EM+
Sbjct: 467 HDMAEELFSEMQ 478
Score = 39.7 bits (91), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 47/237 (19%), Positives = 95/237 (40%), Gaps = 10/237 (4%)
Query: 448 QPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQA 507
QP Y +++ + K + AE E ++ D + +I G +A
Sbjct: 201 QPDFVNYSSIIQYLTRSNKIDSPILQKLYAEIETDKIEIDGHLMNDIIVGFSKAGDPTRA 260
Query: 508 HDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQS 567
L G+ S +++ A + R E AL + R G++ Y ALL+
Sbjct: 261 MRFLAMAQSNGLNPKPSTLVAVILALGNSGRTHEAEALFEEIRENGLEPRTRAYNALLKG 320
Query: 568 KIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGL--MAKLLQEVKEGQR 625
+ A + EM+++ + + Q + +L+ A AG A+++ + E
Sbjct: 321 YVRTGSLKDAEFVVSEMEKAGV-KPDEQTYSLLIDVYAH---AGRWESARIVLKEMEASN 376
Query: 626 IDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKY 682
+ + ++ ++ + K Q + + LK M+S G P+ ++ M+ + GKY
Sbjct: 377 VQPNSYVFSRILANYRDKGEWQKSFQVLKDMKSSGVQPDRHFYNVMIDTF----GKY 429
>gi|3080374|emb|CAA18631.1| putative protein [Arabidopsis thaliana]
gi|7268739|emb|CAB78946.1| putative protein [Arabidopsis thaliana]
Length = 814
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 127/622 (20%), Positives = 235/622 (37%), Gaps = 72/622 (11%)
Query: 122 FPRKTLVNKILTSFVESLDSKWLEKAYGLVEQAFEEGKQILLEKEPLIYLSL----GLSK 177
FP KT N +LTS V + + + +A+ +V + P +YL K
Sbjct: 212 FPSKTTCNILLTSLVRANEFQKCCEAFDVVCKGVS----------PDVYLFTTAINAFCK 261
Query: 178 CGLPVPASTILRKLVATEQYPPVTAWSAILAHMSLTA--PGAYLAAELILEIGY------ 229
G A + K+ P V ++ ++ + + A++ E ++E G
Sbjct: 262 GGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLIT 321
Query: 230 --LFQDGRVDPRKKCNAPLI-------AMKPNTNTFNIALAGCLLFETTRKAEQLLDIMP 280
+ G ++ +A + PN +N + + + KA ++ D+M
Sbjct: 322 YSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMV 381
Query: 281 RIGVKADSNLLIIMAHIYERNGRREEL-RKLQRHIDEAVNLSDIQFRQFYNCLLSCHLKF 339
G+ S+ + Y +NG+ + R L+ + N++ F CLL HL F
Sbjct: 382 SKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVI-CLLCSHLMF 440
Query: 340 GDLNSASKMVLEMLQRAKEARNSLAAAMLPFNAVGVNNRTPSE---QNVNCTNSVDLENS 396
+SA + V EML R L ++ + E Q +N VD S
Sbjct: 441 ---DSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTS 497
Query: 397 -----GIIENHILSYEDFTKDRKFVALEAEVKRV-LQTLLGMLQKQVELI--------TT 442
G+ E L E F ++ + + RV TL+ + +L
Sbjct: 498 NALLHGLCEAGKLD-EAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMV 556
Query: 443 EHGILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLG 502
+ G L+P Y L+ K +E F ++ + D +I C
Sbjct: 557 KRG-LKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGML--PDVYTYSVMIDGCCKAE 613
Query: 503 WLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYE 562
++ + DEM V+ ++ VY L++AY + R L D + GI +++ Y
Sbjct: 614 RTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYT 673
Query: 563 ALLQSKIVQKDTPGALHLFKEMK-ESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVK 621
+L++ + A LF+EM+ E P H + L+ G + + + LL+E+
Sbjct: 674 SLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFH--YTALIDGYGKLGQMVKVECLLREM- 730
Query: 622 EGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGG- 680
+ + + +I + + + +A + L MR G +P++ T+ + GY GG
Sbjct: 731 HSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGV 790
Query: 681 ----------KYTEVTELWGEM 692
Y + E W ++
Sbjct: 791 LEAFKGSDEENYAAIIEGWNKL 812
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 66/270 (24%), Positives = 98/270 (36%), Gaps = 36/270 (13%)
Query: 457 LVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQAHDLLDEMHL 516
L+ EAGK E F I+ E D + +I+ C LD+A LDEM
Sbjct: 500 LLHGLCEAGKLDE--AFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVK 557
Query: 517 AGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQKDTPG 576
G++ + Y+ L+ N+ E D + G+ D Y ++ + T
Sbjct: 558 RGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEE 617
Query: 577 ALHLFKEMKESKIP--------------RSGHQEF------EMLVKGCAQNHEA------ 610
F EM + RSG +M KG + N
Sbjct: 618 GQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIK 677
Query: 611 GLM-------AKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLP 663
G+ AKLL E + ++ V + +I + K M E L+ M S P
Sbjct: 678 GMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHP 737
Query: 664 NAQTFHSMVTGYAAIGGKYTEVTELWGEMK 693
N T+ M+ GYA G TE + L EM+
Sbjct: 738 NKITYTVMIGGYAR-DGNVTEASRLLNEMR 766
>gi|224113511|ref|XP_002316516.1| predicted protein [Populus trichocarpa]
gi|222865556|gb|EEF02687.1| predicted protein [Populus trichocarpa]
Length = 761
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/264 (21%), Positives = 109/264 (41%), Gaps = 39/264 (14%)
Query: 451 EKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQAHDL 510
E +YI +K++ GK +E + + N + S + ++ + + G+ QAH +
Sbjct: 76 EGVYIGAMKSYGRKGKVQEAVDVFERMDFYNCEPSV--LSYNAIMNILVESGYFKQAHKV 133
Query: 511 LDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIV 570
M G+ + +K++ RP LL + S G QL+A Y ++
Sbjct: 134 FLRMKNVGIVPDVYTFTIRIKSFCRTKRPHSALRLLNNMVSQGCQLNAVAYCTVVAGFYE 193
Query: 571 QKDTPGALHLFKEM-------------------------KES-----KIPRSGHQE---- 596
+ A LF +M +ES K+ + G
Sbjct: 194 ENYRVEAYELFNDMLRIGIFPDVSTFNKLLHTLCKKGEVQESERLLNKVLKKGMCSNLFT 253
Query: 597 FEMLVKG-CAQNHEAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKR 655
F + ++G C + +G M+ L ++EG D V +N +I CK + +AEK L +
Sbjct: 254 FNIFIQGLCRKGMLSGAMSMLDSVIREGLTPD--VVTYNTLICGLCKNSNVVEAEKYLHK 311
Query: 656 MRSLGHLPNAQTFHSMVTGYAAIG 679
+ + G P+ T+++++ GY +G
Sbjct: 312 LVNGGLEPDGFTYNTLIDGYCKMG 335
Score = 52.8 bits (125), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 75/178 (42%), Gaps = 16/178 (8%)
Query: 506 QAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALL 565
+A L ++ G+ Y +L+ Y + + +L+ A G D Y +L+
Sbjct: 304 EAEKYLHKLVNGGLEPDGFTYNTLIDGYCKMGMLQNAEKILQGAICKGFVPDEFTYCSLI 363
Query: 566 QSKIVQKDTPGALHLF-----KEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEV 620
+ AL LF K +K + I + ML+KG Q GL+ + LQ +
Sbjct: 364 NGLCQNDEIDRALALFNAALGKGLKPTVIL------YNMLIKGLCQE---GLILQALQMM 414
Query: 621 KEGQRIDCGVHDW--NNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYA 676
E C W N VI+ CK + DA + + G++P+ TF++++ GY
Sbjct: 415 NEMSENGCSSDIWTYNLVINGLCKMGCVSDANNLMNDAIAKGYVPDVFTFNTLIDGYC 472
>gi|222632709|gb|EEE64841.1| hypothetical protein OsJ_19698 [Oryza sativa Japonica Group]
Length = 496
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 66/290 (22%), Positives = 120/290 (41%), Gaps = 10/290 (3%)
Query: 458 VKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQAHDLLDEMHLA 517
V+ AG + L + K + D A ++ C G + +A + DEM L
Sbjct: 9 VRRLCAAGDVRSALAMLARGTKSG-DAALDVTACTALVNGCCKGGDVAEARRVFDEMPLL 67
Query: 518 GVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQKDTPGA 577
G+ + Y +L+ Y + + AL + R G++ + Y L+ + A
Sbjct: 68 GLAPNEVTYTALMHGYFTHGQREKGFALFEEMRRGGVEPNLYTYNCLIGEWCRTGEFERA 127
Query: 578 LHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVK-EGQRIDCGVHDWNNV 636
LF EM I R+ + L+ G ++ + AKLL ++ EG R + +N +
Sbjct: 128 RSLFDEMPVRGIVRN-VVSYNTLIAGLCRHGKLWDAAKLLDMMRTEGTRPS--IITFNLL 184
Query: 637 IHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEMKSFA 696
+ + K M +A +M++ G P+A T++ ++ G+ T +MK
Sbjct: 185 VDGYGKAGKMSNALPFFNQMKAAGFQPSAVTYNMLIAGFCR-ARDMTRANRALSDMKERG 243
Query: 697 SSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFIDKYKYRTL 746
+ L+DS F R +A E++A ME+ + +D + Y L
Sbjct: 244 LEPTKVTYTILIDS----FARENHMGKAFEILAGMEKAGLEVDAHTYGVL 289
Score = 53.1 bits (126), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 74/182 (40%), Gaps = 4/182 (2%)
Query: 502 GWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCY 561
G L A LLD M G R S + L+ Y +A + ++AG Q A Y
Sbjct: 157 GKLWDAAKLLDMMRTEGTRPSIITFNLLVDGYGKAGKMSNALPFFNQMKAAGFQPSAVTY 216
Query: 562 EALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEV- 620
L+ +D A +MKE + + + +L+ A+ + G ++L +
Sbjct: 217 NMLIAGFCRARDMTRANRALSDMKERGLEPT-KVTYTILIDSFARENHMGKAFEILAGME 275
Query: 621 KEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGG 680
K G +D H + ++ C + M+DA K + M G P+ + M+ GY G
Sbjct: 276 KAGLEVD--AHTYGVLVRALCMEGNMKDARKLFQSMGEKGVEPSNVIYDMMIYGYGREGS 333
Query: 681 KY 682
Y
Sbjct: 334 SY 335
Score = 46.2 bits (108), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 82/360 (22%), Positives = 139/360 (38%), Gaps = 39/360 (10%)
Query: 245 PLIAMKPNTNTFNIALAGCLLFETTRKAEQLLDIMPRIGVKADSNLLIIMAHIYE--RNG 302
PL+ + PN T+ + G K L + M R GV + NL I E R G
Sbjct: 65 PLLGLAPNEVTYTALMHGYFTHGQREKGFALFEEMRRGGV--EPNLYTYNCLIGEWCRTG 122
Query: 303 RREELRKLQRHIDEAVNLSDIQFRQFYNCLLSCHLKFGDLNSASKMVLEMLQRAKEARNS 362
E R L DE ++ YN L++ + G L A+K+ L+M+ R + R S
Sbjct: 123 EFERARSL---FDEMPVRGIVRNVVSYNTLIAGLCRHGKLWDAAKL-LDMM-RTEGTRPS 177
Query: 363 LAAAMLPFNAVG----VNNRTPSEQNVNCTNSVDLENSGIIENHILSYEDFTKDRKFVAL 418
+ L + G ++N P N + + S + N +++ F + R
Sbjct: 178 IITFNLLVDGYGKAGKMSNALPF---FNQMKAAGFQPSAVTYNMLIA--GFCRAR----- 227
Query: 419 EAEVKRVLQTLLGMLQKQVELITTEHGILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAE 478
++ R + L M ++ L+PT+ Y L+ +F + L E
Sbjct: 228 --DMTRANRALSDMKERG----------LEPTKVTYTILIDSFARENHMGKAFEILAGME 275
Query: 479 KENLQV-SHDDAALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEAN 537
K L+V +H L V LC+ G + A L M GV S+ +Y ++ Y
Sbjct: 276 KAGLEVDAHTYGVL--VRALCME-GNMKDARKLFQSMGEKGVEPSNVIYDMMIYGYGREG 332
Query: 538 RPREVTALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEF 597
+ L+ + R G+ +++ Y ++ A L +M+ + HQ F
Sbjct: 333 SSYKALKLIMEMRQKGLIPNSASYGLTIRVLCKDDKCQEAEALLDDMETIRSFAGHHQNF 392
Score = 46.2 bits (108), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 51/240 (21%), Positives = 101/240 (42%), Gaps = 22/240 (9%)
Query: 435 KQVELITTEHGILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHV 494
K ++++ TE +P+ + LV + +AGK F + + Q S
Sbjct: 164 KLLDMMRTEG--TRPSIITFNLLVDGYGKAGKMSNALPFFNQMKAAGFQPS--------A 213
Query: 495 ITLCISLGWLDQAHDL------LDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRD 548
+T + + +A D+ L +M G+ + Y L+ ++ N + +L
Sbjct: 214 VTYNMLIAGFCRARDMTRANRALSDMKERGLEPTKVTYTILIDSFARENHMGKAFEILAG 273
Query: 549 ARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNH 608
AG+++DA Y L+++ ++ + A LF+ M E + S + ++M++ G +
Sbjct: 274 MEKAGLEVDAHTYGVLVRALCMEGNMKDARKLFQSMGEKGVEPS-NVIYDMMIYGYGREG 332
Query: 609 EAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSL----GHLPN 664
+ KL+ E+++ I + I CK Q+AE L M ++ GH N
Sbjct: 333 SSYKALKLIMEMRQKGLIPNSA-SYGLTIRVLCKDDKCQEAEALLDDMETIRSFAGHHQN 391
>gi|297724361|ref|NP_001174544.1| Os05g0583900 [Oryza sativa Japonica Group]
gi|42491383|gb|AAS16889.1| hypothetical protein [Oryza sativa Japonica Group]
gi|255676609|dbj|BAH93272.1| Os05g0583900 [Oryza sativa Japonica Group]
Length = 467
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 66/290 (22%), Positives = 120/290 (41%), Gaps = 10/290 (3%)
Query: 458 VKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQAHDLLDEMHLA 517
V+ AG + L + K + D A ++ C G + +A + DEM L
Sbjct: 9 VRRLCAAGDVRSALAMLARGTKSG-DAALDVTACTALVNGCCKGGDVAEARRVFDEMPLL 67
Query: 518 GVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQKDTPGA 577
G+ + Y +L+ Y + + AL + R G++ + Y L+ + A
Sbjct: 68 GLAPNEVTYTALMHGYFTHGQREKGFALFEEMRRGGVEPNLYTYNCLIGEWCRTGEFERA 127
Query: 578 LHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVK-EGQRIDCGVHDWNNV 636
LF EM I R+ + L+ G ++ + AKLL ++ EG R + +N +
Sbjct: 128 RSLFDEMPVRGIVRN-VVSYNTLIAGLCRHGKLWDAAKLLDMMRTEGTRPS--IITFNLL 184
Query: 637 IHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEMKSFA 696
+ + K M +A +M++ G P+A T++ ++ G+ T +MK
Sbjct: 185 VDGYGKAGKMSNALPFFNQMKAAGFQPSAVTYNMLIAGFCR-ARDMTRANRALSDMKERG 243
Query: 697 SSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFIDKYKYRTL 746
+ L+DS F R +A E++A ME+ + +D + Y L
Sbjct: 244 LEPTKVTYTILIDS----FARENHMGKAFEILAGMEKAGLEVDAHTYGVL 289
Score = 53.1 bits (126), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 74/182 (40%), Gaps = 4/182 (2%)
Query: 502 GWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCY 561
G L A LLD M G R S + L+ Y +A + ++AG Q A Y
Sbjct: 157 GKLWDAAKLLDMMRTEGTRPSIITFNLLVDGYGKAGKMSNALPFFNQMKAAGFQPSAVTY 216
Query: 562 EALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEV- 620
L+ +D A +MKE + + + +L+ A+ + G ++L +
Sbjct: 217 NMLIAGFCRARDMTRANRALSDMKERGLEPT-KVTYTILIDSFARENHMGKAFEILAGME 275
Query: 621 KEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGG 680
K G +D H + ++ C + M+DA K + M G P+ + M+ GY G
Sbjct: 276 KAGLEVD--AHTYGVLVRALCMEGNMKDARKLFQSMGEKGVEPSNVIYDMMIYGYGREGS 333
Query: 681 KY 682
Y
Sbjct: 334 SY 335
Score = 47.0 bits (110), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 82/360 (22%), Positives = 139/360 (38%), Gaps = 39/360 (10%)
Query: 245 PLIAMKPNTNTFNIALAGCLLFETTRKAEQLLDIMPRIGVKADSNLLIIMAHIYE--RNG 302
PL+ + PN T+ + G K L + M R GV + NL I E R G
Sbjct: 65 PLLGLAPNEVTYTALMHGYFTHGQREKGFALFEEMRRGGV--EPNLYTYNCLIGEWCRTG 122
Query: 303 RREELRKLQRHIDEAVNLSDIQFRQFYNCLLSCHLKFGDLNSASKMVLEMLQRAKEARNS 362
E R L DE ++ YN L++ + G L A+K+ L+M+ R + R S
Sbjct: 123 EFERARSL---FDEMPVRGIVRNVVSYNTLIAGLCRHGKLWDAAKL-LDMM-RTEGTRPS 177
Query: 363 LAAAMLPFNAVG----VNNRTPSEQNVNCTNSVDLENSGIIENHILSYEDFTKDRKFVAL 418
+ L + G ++N P N + + S + N +++ F + R
Sbjct: 178 IITFNLLVDGYGKAGKMSNALPF---FNQMKAAGFQPSAVTYNMLIA--GFCRAR----- 227
Query: 419 EAEVKRVLQTLLGMLQKQVELITTEHGILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAE 478
++ R + L M ++ L+PT+ Y L+ +F + L E
Sbjct: 228 --DMTRANRALSDMKERG----------LEPTKVTYTILIDSFARENHMGKAFEILAGME 275
Query: 479 KENLQV-SHDDAALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEAN 537
K L+V +H L V LC+ G + A L M GV S+ +Y ++ Y
Sbjct: 276 KAGLEVDAHTYGVL--VRALCME-GNMKDARKLFQSMGEKGVEPSNVIYDMMIYGYGREG 332
Query: 538 RPREVTALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEF 597
+ L+ + R G+ +++ Y ++ A L +M+ + HQ F
Sbjct: 333 SSYKALKLIMEMRQKGLIPNSASYGLTIRVLCKDDKCQEAEALLDDMETIRSFAGHHQNF 392
Score = 46.2 bits (108), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 51/240 (21%), Positives = 101/240 (42%), Gaps = 22/240 (9%)
Query: 435 KQVELITTEHGILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHV 494
K ++++ TE +P+ + LV + +AGK F + + Q S
Sbjct: 164 KLLDMMRTEG--TRPSIITFNLLVDGYGKAGKMSNALPFFNQMKAAGFQPS--------A 213
Query: 495 ITLCISLGWLDQAHDL------LDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRD 548
+T + + +A D+ L +M G+ + Y L+ ++ N + +L
Sbjct: 214 VTYNMLIAGFCRARDMTRANRALSDMKERGLEPTKVTYTILIDSFARENHMGKAFEILAG 273
Query: 549 ARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNH 608
AG+++DA Y L+++ ++ + A LF+ M E + S + ++M++ G +
Sbjct: 274 MEKAGLEVDAHTYGVLVRALCMEGNMKDARKLFQSMGEKGVEPS-NVIYDMMIYGYGREG 332
Query: 609 EAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSL----GHLPN 664
+ KL+ E+++ I + I CK Q+AE L M ++ GH N
Sbjct: 333 SSYKALKLIMEMRQKGLIPNSA-SYGLTIRVLCKDDKCQEAEALLDDMETIRSFAGHHQN 391
>gi|147742764|gb|ABQ50546.1| hypothetical protein [Brassica rapa]
Length = 650
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 56/238 (23%), Positives = 100/238 (42%), Gaps = 22/238 (9%)
Query: 448 QPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISL------ 501
QP + Y ++ ++G T L K E ++ HV+T I +
Sbjct: 227 QPNQFTYGPILNRMCKSGNTASALDLLRKMEHRKIK--------PHVVTYTIIIDNLCKD 278
Query: 502 GWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCY 561
G LD A EM G++A+ Y SL+ ++ R + LLRD + I + +
Sbjct: 279 GRLDDALSFFSEMETKGIKANVFTYNSLIGSFCSFGRWDDGAQLLRDMITRKITPNVVTF 338
Query: 562 EALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQN---HEAGLMAKLLQ 618
AL+ S + + A L+ EM I + L+ G + EA M L+
Sbjct: 339 SALIDSLVKEGKLTEAKDLYNEMITRGI-EPNTITYNSLIYGLCNDKRLDEANQMMDLM- 396
Query: 619 EVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYA 676
V +G D + +N +I+ FCK + + D + ++M G + + T+ +++ G+
Sbjct: 397 -VSKG--CDPDIWTYNILINGFCKAKQVDDGMRLFRKMSLRGMIADTVTYSTLIQGFC 451
Score = 48.1 bits (113), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 55/251 (21%), Positives = 105/251 (41%), Gaps = 13/251 (5%)
Query: 447 LQPTEKIYIKLVKAFLEAGK---TKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGW 503
+ P + L+ + ++ GK K+L + +I E ++++ G LC +
Sbjct: 331 ITPNVVTFSALIDSLVKEGKLTEAKDLYNEMITRGIEPNTITYNSLIYG----LC-NDKR 385
Query: 504 LDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEA 563
LD+A+ ++D M G Y L+ + +A + + L R G+ D Y
Sbjct: 386 LDEANQMMDLMVSKGCDPDIWTYNILINGFCKAKQVDDGMRLFRKMSLRGMIADTVTYST 445
Query: 564 LLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEV-KE 622
L+Q + A +F+EM + G + +L+ G N E +L ++ K
Sbjct: 446 LIQGFCQSRKLIVAKKVFQEMVSQGV-HPGIMTYAILLDGLCDNGELEEALGILDQMHKC 504
Query: 623 GQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKY 682
+D G+ +N +IH C + DA + S G + Q+++ M++G
Sbjct: 505 KMELDIGI--YNIIIHGMCNANKVDDAWSLFCSLPSKGVKRDIQSYNIMLSGLCK-RSSL 561
Query: 683 TEVTELWGEMK 693
+E L+ +MK
Sbjct: 562 SEADALFRKMK 572
Score = 46.2 bits (108), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 67/130 (51%), Gaps = 3/130 (2%)
Query: 559 SCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQ 618
S Y+ L+S +V A+ LF+ M S+ P +F L A+ + L+ L +
Sbjct: 56 SSYKERLRSGLVDIKKDDAVALFQSMLRSR-PLPTVIDFNRLFGLLARTKQYDLVLALCK 114
Query: 619 EVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAI 678
++ E + I ++ N +I+ FC++R + A A+ ++ LG+ PN TF++++ G +
Sbjct: 115 QM-ELKGIAYDLYTLNIMINCFCRRRKLGFAFSAMGKIFKLGYEPNTVTFNTLLNGL-CL 172
Query: 679 GGKYTEVTEL 688
G+ E EL
Sbjct: 173 EGRVFEAVEL 182
Score = 40.8 bits (94), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 27/120 (22%), Positives = 54/120 (45%), Gaps = 1/120 (0%)
Query: 502 GWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCY 561
G L++A +LD+MH + +Y ++ AN+ + +L S G++ D Y
Sbjct: 489 GELEEALGILDQMHKCKMELDIGIYNIIIHGMCNANKVDDAWSLFCSLPSKGVKRDIQSY 548
Query: 562 EALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVK 621
+L + A LF++MKE G + L++ + ++ +L++E+K
Sbjct: 549 NIMLSGLCKRSSLSEADALFRKMKEDGYEPDGCT-YNTLIRAHLRGNDITTSVQLIEEMK 607
>gi|115473111|ref|NP_001060154.1| Os07g0590600 [Oryza sativa Japonica Group]
gi|34393454|dbj|BAC82993.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113611690|dbj|BAF22068.1| Os07g0590600 [Oryza sativa Japonica Group]
Length = 784
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 71/310 (22%), Positives = 125/310 (40%), Gaps = 39/310 (12%)
Query: 474 LIKAEKENLQVSHDDAALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAY 533
L+ + KE+ V+ D +I+ C +A + DEM +G + SLL Y
Sbjct: 230 LVASMKEH-GVAPDRYTYNTLISCCRRRALYKEAAQVFDEMKASGFEPDKVTFNSLLDVY 288
Query: 534 IEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKE------- 586
+A R E ++++ G Y +L+ S + A+ L +EM+
Sbjct: 289 GKARRHDEAIEVIQEMERVGCPPSVVTYNSLISSYVKDGLLEQAVALKQEMEVKGMKPDV 348
Query: 587 -------SKIPRSGHQEF------EMLVKGCAQN---HEA-----GLMAKL--LQEVKEG 623
S + R+G + EM+ GC N + A G+ K + V +
Sbjct: 349 VTYTTLISGLDRAGKIDAAIVEYDEMVRNGCKPNLCTYNALIKMHGVRGKFPEMMAVFDE 408
Query: 624 QRIDCGVHD---WNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGG 680
R V D WN ++ F + L + K M+ G++P T+ S+++ Y+ G
Sbjct: 409 FRSAGFVPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKKAGYIPERDTYVSLISSYSRCG- 467
Query: 681 KYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFIDK 740
+ +L ++ + D ++VL RGG + +A ++ A MEE D+
Sbjct: 468 ----LFDLAMQIYKRMMEAGIYPDVSTYNAVLSALARGGRWEQAEKLFAEMEERDCKPDE 523
Query: 741 YKYRTLFLKY 750
Y Y +L Y
Sbjct: 524 YSYSSLLHAY 533
Score = 53.9 bits (128), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 101/519 (19%), Positives = 200/519 (38%), Gaps = 67/519 (12%)
Query: 248 AMKPNTNTFNIALAGCLLFETTRKAEQLLDIMPRIGVKADSNLLIIMAHIYERNGRREEL 307
+ P+ T+N ++ C ++A Q+ D M G + D + +Y + R +E
Sbjct: 238 GVAPDRYTYNTLISCCRRRALYKEAAQVFDEMKASGFEPDKVTFNSLLDVYGKARRHDEA 297
Query: 308 RKLQRHIDEAVNLSDIQFRQFYNCLLSCHLKFGDLNSASKMVLEM--------------- 352
++ + ++ + YN L+S ++K G L A + EM
Sbjct: 298 IEVIQEMERVGCPPSVVT---YNSLISSYVKDGLLEQAVALKQEMEVKGMKPDVVTYTTL 354
Query: 353 ---LQRAKE-----------ARNSLAAAMLPFNAV----GVNNRTPSEQNVNCTNSVDLE 394
L RA + RN + +NA+ GV + P V +
Sbjct: 355 ISGLDRAGKIDAAIVEYDEMVRNGCKPNLCTYNALIKMHGVRGKFPEMMAV----FDEFR 410
Query: 395 NSGIIENHILSYEDFTKDRKFVALEAEVKRVLQTLLGMLQKQVELITTEHGILQPTEKIY 454
++G + + I+++ L++EV V + + K+ I P Y
Sbjct: 411 SAGFVPD-IVTWNTLLAVFGQNGLDSEVSGVFKEM-----KKAGYI--------PERDTY 456
Query: 455 IKLVKAFLEAGKTKELTHFLIKAEKENLQ--VSHDDAALGHVITLCISLGWLDQAHDLLD 512
+ L+ ++ G L ++ K ++ + D + V++ G +QA L
Sbjct: 457 VSLISSYSRCG----LFDLAMQIYKRMMEAGIYPDVSTYNAVLSALARGGRWEQAEKLFA 512
Query: 513 EMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQK 572
EM + Y+SLL AY A R ++ AL D S I+ + L+
Sbjct: 513 EMEERDCKPDEYSYSSLLHAYANAKRLDKMKALSDDIYSERIEPHNWLVKTLVLVNSKVN 572
Query: 573 DTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRIDCGVHD 632
+ A F E+++ + + +V +N + K+L +KE I+
Sbjct: 573 NLAEAEKAFLELRQKRCSLDINV-LNAMVSIYGKNRMVRKVEKILSLMKESA-INLSAAT 630
Query: 633 WNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEM 692
+N+++H + + + E L ++S G P+ ++++++ Y G+ E + L+ EM
Sbjct: 631 YNSLMHMYSRLGDCEKCENILTEIKSSGVRPDRYSYNTVIYAYGR-KGQMKEASRLFSEM 689
Query: 693 KSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMM 731
K + + D + + ++V F A E+V M
Sbjct: 690 K----CSGLKPDVVTYNIFVKSYVSNSMFEEAIELVRYM 724
Score = 44.3 bits (103), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 58/241 (24%), Positives = 101/241 (41%), Gaps = 22/241 (9%)
Query: 513 EMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQK 572
E+H GV V A+ ++ A R E +ALL A DA Y AL+ +
Sbjct: 131 ELHGEGVLHHPRVLATAIRVMARAGRLAEASALL----DAAPGPDAGAYTALVSAFSRAG 186
Query: 573 DTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKE--GQRIDCGV 630
A+ +F+ M +S + + +V H MA +EV E + GV
Sbjct: 187 RFRDAVAVFRRMVDSGVQPA-------IVTYNVVLHVYSKMAVPWKEVVELVASMKEHGV 239
Query: 631 ----HDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVT 686
+ +N +I ++ L ++A + M++ G P+ TF+S++ Y ++ E
Sbjct: 240 APDRYTYNTLISCCRRRALYKEAAQVFDEMKASGFEPDKVTFNSLLDVYGK-ARRHDEAI 298
Query: 687 ELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFIDKYKYRTL 746
E+ EM+ S+ +S++ ++V+ G +A + ME M D Y TL
Sbjct: 299 EVIQEMERVGCPPSV----VTYNSLISSYVKDGLLEQAVALKQEMEVKGMKPDVVTYTTL 354
Query: 747 F 747
Sbjct: 355 I 355
Score = 42.0 bits (97), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 53/253 (20%), Positives = 100/253 (39%), Gaps = 11/253 (4%)
Query: 502 GWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCY 561
G + + EM AG Y SL+ +Y + + AGI D S Y
Sbjct: 432 GLDSEVSGVFKEMKKAGYIPERDTYVSLISSYSRCGLFDLAMQIYKRMMEAGIYPDVSTY 491
Query: 562 EALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVK 621
A+L + A LF EM+E + + L+ A M L ++
Sbjct: 492 NAVLSALARGGRWEQAEKLFAEMEERDC-KPDEYSYSSLLHAYANAKRLDKMKALSDDIY 550
Query: 622 EGQRIDCGVHDW--NNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIG 679
+RI+ H+W ++ K + +AEKA +R + ++MV+ Y
Sbjct: 551 -SERIE--PHNWLVKTLVLVNSKVNNLAEAEKAFLELRQKRCSLDINVLNAMVSIY---- 603
Query: 680 GKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFID 739
GK V ++ ++ S +++N +S+++ + R G + ++ ++ + D
Sbjct: 604 GKNRMVRKVE-KILSLMKESAINLSAATYNSLMHMYSRLGDCEKCENILTEIKSSGVRPD 662
Query: 740 KYKYRTLFLKYHK 752
+Y Y T+ Y +
Sbjct: 663 RYSYNTVIYAYGR 675
Score = 40.8 bits (94), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 35/162 (21%), Positives = 75/162 (46%), Gaps = 5/162 (3%)
Query: 524 SVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKE 583
+V +++ Y + R+V +L + + I L A+ Y +L+ D ++ E
Sbjct: 594 NVLNAMVSIYGKNRMVRKVEKILSLMKESAINLSAATYNSLMHMYSRLGDCEKCENILTE 653
Query: 584 MKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVK-EGQRIDCGVHDWNNVIHFFCK 642
+K S + R + ++ + + ++L E+K G + D V +N + +
Sbjct: 654 IKSSGV-RPDRYSYNTVIYAYGRKGQMKEASRLFSEMKCSGLKPD--VVTYNIFVKSYVS 710
Query: 643 KRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTE 684
+ ++A + ++ M + G PN +T++S+V GY GK T+
Sbjct: 711 NSMFEEAIELVRYMVTQGCKPNERTYNSIVEGYCR-NGKLTD 751
>gi|302757245|ref|XP_002962046.1| hypothetical protein SELMODRAFT_76034 [Selaginella moellendorffii]
gi|300170705|gb|EFJ37306.1| hypothetical protein SELMODRAFT_76034 [Selaginella moellendorffii]
Length = 465
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 61/241 (25%), Positives = 108/241 (44%), Gaps = 22/241 (9%)
Query: 449 PTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQ---VSHDDAALGHVITLCISLGWLD 505
P + LV F + G+ + L ++Q VS++ G + LC W
Sbjct: 8 PNSVTFNALVNGFSKQGRPGDCERLLETMAARDIQPNVVSYN----GLLEGLCKLERW-H 62
Query: 506 QAHDLLDEMHLAGVRASSSV--YASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEA 563
+A +L+ +M G R++ + Y++LL Y +A + E LL++ S G++ DA
Sbjct: 63 EAEELVRDMISRGGRSTPDMVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDA----- 117
Query: 564 LLQSKIVQKDTPGALHLFKEMKESKIPRSGHQ----EFEMLVKGCAQNHEAGLMAKLLQE 619
L+ +K+V A ++ R+G F L+ GC + + LLQ+
Sbjct: 118 LMYTKVVASLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQK 177
Query: 620 VK-EGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAI 678
+ G + D V +N ++ CK +Q+AE+ L+RM++ G P+ + S V G
Sbjct: 178 MAASGVKAD--VVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKS 235
Query: 679 G 679
G
Sbjct: 236 G 236
Score = 45.8 bits (107), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 102/244 (41%), Gaps = 24/244 (9%)
Query: 449 PTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVIT-------LCISL 501
P Y V ++GK + L E ++ SH D +V+T LC S
Sbjct: 220 PDVVAYSSFVYGLCKSGKVLDAHQVL-----EQMRDSHHDP---NVVTYNTILDGLCKS- 270
Query: 502 GWLDQAHDLLDEMHLA-GVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASC 560
G +D A +++++M + G + Y++++ + R +E +++ AG + D
Sbjct: 271 GKIDTALEMMEQMASSDGCGLNVVGYSTVVDGLCKLGRTQEARSVMEAMARAGCRPDVVT 330
Query: 561 YEALLQSKIVQKDTPGALHLFKEMK-ESKIPRSGHQEFEMLVKG---CAQNHEAGLMAK- 615
Y +L+ A+ +EM E P + + LV G C + EA M +
Sbjct: 331 YSSLVNGLCKAGKIEEAVEAVREMAMEGCKPNA--VTYCSLVHGLCSCGRLAEAERMVEE 388
Query: 616 LLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGY 675
+ G V +N +I CK + DA K +RMRS G P+ ++ ++V G
Sbjct: 389 MSSGGGGGHHCPPSVSTYNALIGGLCKAGRIDDALKFFQRMRSQGCDPDGVSYSTIVEGL 448
Query: 676 AAIG 679
A G
Sbjct: 449 ARSG 452
>gi|18407744|ref|NP_564809.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169913|sp|Q9CAM8.1|PP100_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g63150
gi|12323259|gb|AAG51611.1|AC010795_15 unknown protein; 70626-72515 [Arabidopsis thaliana]
gi|15810427|gb|AAL07101.1| unknown protein [Arabidopsis thaliana]
gi|24030501|gb|AAN41397.1| unknown protein [Arabidopsis thaliana]
gi|332195941|gb|AEE34062.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 629
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 96/464 (20%), Positives = 186/464 (40%), Gaps = 71/464 (15%)
Query: 247 IAMKPNTNTFNIALAGCLLFETTRKAEQLLDIMPRIGVKADSNLLIIMAH-IYERNGRRE 305
+ +P+ T + L G + A L+D M +G K D+ + H ++ N E
Sbjct: 147 LGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASE 206
Query: 306 ELRKLQRHIDEAVNLSDIQFRQFYNCLLSCHLKFGDLNSASKMVLEMLQRAKEARNSLAA 365
+ + + + + + N L K GD++ A L +L + + AR + A
Sbjct: 207 AVALVDQMVQRGCQPDLVTYGTVVNGLC----KRGDIDLA----LNLLNKMEAAR--IKA 256
Query: 366 AMLPFNAVGVNNRTPSEQNVNCTNSVDLENSGIIENHILSYEDFTKDRKFVALEAEVKRV 425
++ FN + + V ++E GI N +++Y ++ R+
Sbjct: 257 NVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPN-VVTYNSLINCLCNYGRWSDASRL 315
Query: 426 LQTLLGMLQKQVELITTEHGILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEK---ENL 482
L ML+K++ P + L+ AF + GK L++AEK E +
Sbjct: 316 LSN---MLEKKI----------NPNVVTFNALIDAFFKEGK-------LVEAEKLHEEMI 355
Query: 483 QVSHDDAALGHVITL---CISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRP 539
Q S D + + + + C+ LD+A + M + Y +L+ + + R
Sbjct: 356 QRSIDPDTITYNLLINGFCMH-NRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRV 414
Query: 540 REVTALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEM 599
+ L R+ G+ + Y ++Q D A +FK+M +++P + + +
Sbjct: 415 EDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVP-TDIMTYSI 473
Query: 600 LVKG-CAQN--HEAGLMAKLLQ----------------------EVKEGQRIDCG----- 629
L+ G C+ A ++ K LQ +V E + C
Sbjct: 474 LLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSLSIKP 533
Query: 630 -VHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMV 672
V +N +I C KRL+Q+A+ ++M+ G LPN+ T+++++
Sbjct: 534 DVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLI 577
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 58/274 (21%), Positives = 112/274 (40%), Gaps = 14/274 (5%)
Query: 448 QPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQA 507
+P + L+ K E + + + Q D G V+ G +D A
Sbjct: 185 KPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQ--PDLVTYGTVVNGLCKRGDIDLA 242
Query: 508 HDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQS 567
+LL++M A ++A+ ++ +++ + + L + + GI+ + Y +L+
Sbjct: 243 LNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINC 302
Query: 568 KIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRID 627
A L M E KI F L+ + + KL +E+ + + ID
Sbjct: 303 LCNYGRWSDASRLLSNMLEKKI-NPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQ-RSID 360
Query: 628 CGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTE 687
+N +I+ FC + +A++ K M S LPN QT+++++ G+ + + E
Sbjct: 361 PDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKC-KRVEDGVE 419
Query: 688 LWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFF 721
L+ EM + ++V YT + GFF
Sbjct: 420 LFREMSQRGL---------VGNTVTYTTIIQGFF 444
>gi|18415314|ref|NP_567587.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|334186696|ref|NP_001190771.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|15810161|gb|AAL07224.1| unknown protein [Arabidopsis thaliana]
gi|332658782|gb|AEE84182.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332658783|gb|AEE84183.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 825
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 127/622 (20%), Positives = 235/622 (37%), Gaps = 72/622 (11%)
Query: 122 FPRKTLVNKILTSFVESLDSKWLEKAYGLVEQAFEEGKQILLEKEPLIYLSL----GLSK 177
FP KT N +LTS V + + + +A+ +V + P +YL K
Sbjct: 223 FPSKTTCNILLTSLVRANEFQKCCEAFDVVCKGVS----------PDVYLFTTAINAFCK 272
Query: 178 CGLPVPASTILRKLVATEQYPPVTAWSAILAHMSLTA--PGAYLAAELILEIGY------ 229
G A + K+ P V ++ ++ + + A++ E ++E G
Sbjct: 273 GGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLIT 332
Query: 230 --LFQDGRVDPRKKCNAPLI-------AMKPNTNTFNIALAGCLLFETTRKAEQLLDIMP 280
+ G ++ +A + PN +N + + + KA ++ D+M
Sbjct: 333 YSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMV 392
Query: 281 RIGVKADSNLLIIMAHIYERNGRREEL-RKLQRHIDEAVNLSDIQFRQFYNCLLSCHLKF 339
G+ S+ + Y +NG+ + R L+ + N++ F CLL HL F
Sbjct: 393 SKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVI-CLLCSHLMF 451
Query: 340 GDLNSASKMVLEMLQRAKEARNSLAAAMLPFNAVGVNNRTPSE---QNVNCTNSVDLENS 396
+SA + V EML R L ++ + E Q +N VD S
Sbjct: 452 ---DSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTS 508
Query: 397 -----GIIENHILSYEDFTKDRKFVALEAEVKRV-LQTLLGMLQKQVELI--------TT 442
G+ E L E F ++ + + RV TL+ + +L
Sbjct: 509 NALLHGLCEAGKLD-EAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMV 567
Query: 443 EHGILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLG 502
+ G L+P Y L+ K +E F ++ + D +I C
Sbjct: 568 KRG-LKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGML--PDVYTYSVMIDGCCKAE 624
Query: 503 WLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYE 562
++ + DEM V+ ++ VY L++AY + R L D + GI +++ Y
Sbjct: 625 RTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYT 684
Query: 563 ALLQSKIVQKDTPGALHLFKEMK-ESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVK 621
+L++ + A LF+EM+ E P H + L+ G + + + LL+E+
Sbjct: 685 SLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFH--YTALIDGYGKLGQMVKVECLLREM- 741
Query: 622 EGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGG- 680
+ + + +I + + + +A + L MR G +P++ T+ + GY GG
Sbjct: 742 HSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGV 801
Query: 681 ----------KYTEVTELWGEM 692
Y + E W ++
Sbjct: 802 LEAFKGSDEENYAAIIEGWNKL 823
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 66/270 (24%), Positives = 98/270 (36%), Gaps = 36/270 (13%)
Query: 457 LVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQAHDLLDEMHL 516
L+ EAGK E F I+ E D + +I+ C LD+A LDEM
Sbjct: 511 LLHGLCEAGKLDE--AFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVK 568
Query: 517 AGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQKDTPG 576
G++ + Y+ L+ N+ E D + G+ D Y ++ + T
Sbjct: 569 RGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEE 628
Query: 577 ALHLFKEMKESKIP--------------RSGHQEF------EMLVKGCAQNHEA------ 610
F EM + RSG +M KG + N
Sbjct: 629 GQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIK 688
Query: 611 GLM-------AKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLP 663
G+ AKLL E + ++ V + +I + K M E L+ M S P
Sbjct: 689 GMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHP 748
Query: 664 NAQTFHSMVTGYAAIGGKYTEVTELWGEMK 693
N T+ M+ GYA G TE + L EM+
Sbjct: 749 NKITYTVMIGGYAR-DGNVTEASRLLNEMR 777
>gi|452823780|gb|EME30788.1| mitochondrial protein translocase, MPT family [Galdieria
sulphuraria]
Length = 925
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 62/243 (25%), Positives = 102/243 (41%), Gaps = 12/243 (4%)
Query: 491 LGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDAR 550
+I L G L A +LD M L GV S VY+SLL+A + +NR + +
Sbjct: 437 FSQLINLYSKRGQLGSAFGVLDSMSLWGVFPDSYVYSSLLQACVRSNRFDLALKVYEHLQ 496
Query: 551 SAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEA 610
G +DA Y L+ D A L ++ +E + LV CA++H+
Sbjct: 497 QEGYVMDAHMYNTLVNGAGSLGDLETAERLVRQAQEYNVGLDTALCNTFLV-SCAKHHDI 555
Query: 611 GLMAKLLQEVKEGQRIDCGVHD---WNNVIHFFCKKRLMQDAEKAL---KRMRSLGHLPN 664
L E+ G + + +N +I+ +CK Q E+AL +R R G P+
Sbjct: 556 SRAEHLFLEMSNGNMGSLALPNGKTYNILINLYCKMNPPQ-VERALEMVERQRMYGFSPD 614
Query: 665 AQTFHSMVTGYAAIGGKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARA 724
TF ++ Y + + + EL+ ++++ S D+V+ R G+ A
Sbjct: 615 ESTFCPIIDAYFRVNDPFKAI-ELFKKLRTEGSP---KLSRVTYDTVINGLGRSGYLDDA 670
Query: 725 NEV 727
EV
Sbjct: 671 FEV 673
>gi|297806115|ref|XP_002870941.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297316778|gb|EFH47200.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 719
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 54/232 (23%), Positives = 106/232 (45%), Gaps = 11/232 (4%)
Query: 502 GWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCY 561
G ++A ++ EM +G+ S+ Y SLL + E + D RS + D C+
Sbjct: 309 GKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDAVETENIFSDMRSRDVVPDLVCF 368
Query: 562 EALLQSKIVQKDTPGALHLFKEMKESK-IPRSGHQEFEMLVKG-CAQNHEAGLMAKLLQE 619
+++ + AL F +KE+ IP + + +L++G C + + M +
Sbjct: 369 SSMMSLFTRSGNLDKALMYFNSVKEAGLIP--DNVIYTILIQGYCRKGMISEAMNLRNEM 426
Query: 620 VKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIG 679
+++G +D V +N ++H CK++++ +A+K M G P++ T ++ G+ +
Sbjct: 427 LQQGCAMD--VVTYNTILHGLCKRKMLGEADKLFNEMTERGLFPDSYTLTILIDGHCKL- 483
Query: 680 GKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMM 731
G EL+ +MK + D +++L F + G A E+ A M
Sbjct: 484 GNLQNAMELFKKMK----EKRIKLDVVTYNTLLDGFGKVGDIDTAKEIWADM 531
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/184 (22%), Positives = 76/184 (41%), Gaps = 36/184 (19%)
Query: 494 VITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAG 553
V LC S G L +A + DEM ++ + + S++K Y + + L S G
Sbjct: 547 VNALC-SKGHLSEAFRVWDEMISKSIKPTVMICNSMIKGYCRSGNASDGEIFLEKMISEG 605
Query: 554 IQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLM 613
D Y L+ + +++ A L K+M+E + GL+
Sbjct: 606 FVPDCISYNTLIYGFVKEENMSKAFGLVKKMEE---------------------KQGGLV 644
Query: 614 AKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVT 673
V +N+++H FC++ M++AE L++M G P+ T+ S++
Sbjct: 645 PD--------------VFTYNSILHGFCRENQMKEAEAVLRKMIERGVNPDRSTYTSLIN 690
Query: 674 GYAA 677
G+ +
Sbjct: 691 GFVS 694
Score = 46.2 bits (108), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 64/307 (20%), Positives = 123/307 (40%), Gaps = 21/307 (6%)
Query: 447 LQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQ 506
L P IY L++ + G E + ++ E + D ++ L +
Sbjct: 396 LIPDNVIYTILIQGYCRKGMISEAMN--LRNEMLQQGCAMDVVTYNTILHGLCKRKMLGE 453
Query: 507 AHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQ 566
A L +EM G+ S L+ + + + L + + I+LD Y LL
Sbjct: 454 ADKLFNEMTERGLFPDSYTLTILIDGHCKLGNLQNAMELFKKMKEKRIKLDVVTYNTLLD 513
Query: 567 SKIVQKDTPGALHLFKEMKESKI---PRSGHQEFEMLVKG-CAQNHEAGLMAKLLQEVKE 622
D A ++ +M +I P S F +LV C++ H +++ + E
Sbjct: 514 GFGKVGDIDTAKEIWADMVSKEILPTPIS----FSILVNALCSKGH----LSEAFRVWDE 565
Query: 623 --GQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGG 680
+ I V N++I +C+ D E L++M S G +P+ ++++++ G+
Sbjct: 566 MISKSIKPTVMICNSMIKGYCRSGNASDGEIFLEKMISEGFVPDCISYNTLIYGFV---- 621
Query: 681 KYTEVTELWGEMKSFASST-SMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFID 739
K +++ +G +K + D +S+L+ F R A V+ M E + D
Sbjct: 622 KEENMSKAFGLVKKMEEKQGGLVPDVFTYNSILHGFCRENQMKEAEAVLRKMIERGVNPD 681
Query: 740 KYKYRTL 746
+ Y +L
Sbjct: 682 RSTYTSL 688
>gi|125600921|gb|EAZ40497.1| hypothetical protein OsJ_24952 [Oryza sativa Japonica Group]
Length = 766
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 71/310 (22%), Positives = 125/310 (40%), Gaps = 39/310 (12%)
Query: 474 LIKAEKENLQVSHDDAALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAY 533
L+ + KE+ V+ D +I+ C +A + DEM +G + SLL Y
Sbjct: 212 LVASMKEH-GVAPDRYTYNTLISCCRRRALYKEAAQVFDEMKASGFEPDKVTFNSLLDVY 270
Query: 534 IEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKE------- 586
+A R E ++++ G Y +L+ S + A+ L +EM+
Sbjct: 271 GKARRHDEAIEVIQEMERVGCPPSVVTYNSLISSYVKDGLLEQAVALKQEMEVKGMKPDV 330
Query: 587 -------SKIPRSGHQEF------EMLVKGCAQN---HEA-----GLMAKL--LQEVKEG 623
S + R+G + EM+ GC N + A G+ K + V +
Sbjct: 331 VTYTTLISGLDRAGKIDAAIVEYDEMVRNGCKPNLCTYNALIKMHGVRGKFPEMMAVFDE 390
Query: 624 QRIDCGVHD---WNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGG 680
R V D WN ++ F + L + K M+ G++P T+ S+++ Y+ G
Sbjct: 391 FRSAGFVPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKKAGYIPERDTYVSLISSYSRCG- 449
Query: 681 KYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFIDK 740
+ +L ++ + D ++VL RGG + +A ++ A MEE D+
Sbjct: 450 ----LFDLAMQIYKRMMEAGIYPDVSTYNAVLSALARGGRWEQAEKLFAEMEERDCKPDE 505
Query: 741 YKYRTLFLKY 750
Y Y +L Y
Sbjct: 506 YSYSSLLHAY 515
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 101/519 (19%), Positives = 200/519 (38%), Gaps = 67/519 (12%)
Query: 248 AMKPNTNTFNIALAGCLLFETTRKAEQLLDIMPRIGVKADSNLLIIMAHIYERNGRREEL 307
+ P+ T+N ++ C ++A Q+ D M G + D + +Y + R +E
Sbjct: 220 GVAPDRYTYNTLISCCRRRALYKEAAQVFDEMKASGFEPDKVTFNSLLDVYGKARRHDEA 279
Query: 308 RKLQRHIDEAVNLSDIQFRQFYNCLLSCHLKFGDLNSASKMVLEM--------------- 352
++ + ++ + YN L+S ++K G L A + EM
Sbjct: 280 IEVIQEMERVGCPPSVVT---YNSLISSYVKDGLLEQAVALKQEMEVKGMKPDVVTYTTL 336
Query: 353 ---LQRAKE-----------ARNSLAAAMLPFNAV----GVNNRTPSEQNVNCTNSVDLE 394
L RA + RN + +NA+ GV + P V +
Sbjct: 337 ISGLDRAGKIDAAIVEYDEMVRNGCKPNLCTYNALIKMHGVRGKFPEMMAV----FDEFR 392
Query: 395 NSGIIENHILSYEDFTKDRKFVALEAEVKRVLQTLLGMLQKQVELITTEHGILQPTEKIY 454
++G + + I+++ L++EV V + + K+ I P Y
Sbjct: 393 SAGFVPD-IVTWNTLLAVFGQNGLDSEVSGVFKEM-----KKAGYI--------PERDTY 438
Query: 455 IKLVKAFLEAGKTKELTHFLIKAEKENLQ--VSHDDAALGHVITLCISLGWLDQAHDLLD 512
+ L+ ++ G L ++ K ++ + D + V++ G +QA L
Sbjct: 439 VSLISSYSRCG----LFDLAMQIYKRMMEAGIYPDVSTYNAVLSALARGGRWEQAEKLFA 494
Query: 513 EMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQK 572
EM + Y+SLL AY A R ++ AL D S I+ + L+
Sbjct: 495 EMEERDCKPDEYSYSSLLHAYANAKRLDKMKALSDDIYSERIEPHNWLVKTLVLVNSKVN 554
Query: 573 DTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRIDCGVHD 632
+ A F E+++ + + +V +N + K+L +KE I+
Sbjct: 555 NLAEAEKAFLELRQKRCSLDINV-LNAMVSIYGKNRMVRKVEKILSLMKESA-INLSAAT 612
Query: 633 WNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEM 692
+N+++H + + + E L ++S G P+ ++++++ Y G+ E + L+ EM
Sbjct: 613 YNSLMHMYSRLGDCEKCENILTEIKSSGVRPDRYSYNTVIYAYGR-KGQMKEASRLFSEM 671
Query: 693 KSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMM 731
K + + D + + ++V F A E+V M
Sbjct: 672 K----CSGLKPDVVTYNIFVKSYVSNSMFEEAIELVRYM 706
Score = 44.3 bits (103), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 58/241 (24%), Positives = 101/241 (41%), Gaps = 22/241 (9%)
Query: 513 EMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQK 572
E+H GV V A+ ++ A R E +ALL A DA Y AL+ +
Sbjct: 113 ELHGEGVLHHPRVLATAIRVMARAGRLAEASALL----DAAPGPDAGAYTALVSAFSRAG 168
Query: 573 DTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKE--GQRIDCGV 630
A+ +F+ M +S + + +V H MA +EV E + GV
Sbjct: 169 RFRDAVAVFRRMVDSGVQPA-------IVTYNVVLHVYSKMAVPWKEVVELVASMKEHGV 221
Query: 631 ----HDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVT 686
+ +N +I ++ L ++A + M++ G P+ TF+S++ Y ++ E
Sbjct: 222 APDRYTYNTLISCCRRRALYKEAAQVFDEMKASGFEPDKVTFNSLLDVYGK-ARRHDEAI 280
Query: 687 ELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFIDKYKYRTL 746
E+ EM+ S+ +S++ ++V+ G +A + ME M D Y TL
Sbjct: 281 EVIQEMERVGCPPSV----VTYNSLISSYVKDGLLEQAVALKQEMEVKGMKPDVVTYTTL 336
Query: 747 F 747
Sbjct: 337 I 337
Score = 42.0 bits (97), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 53/253 (20%), Positives = 100/253 (39%), Gaps = 11/253 (4%)
Query: 502 GWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCY 561
G + + EM AG Y SL+ +Y + + AGI D S Y
Sbjct: 414 GLDSEVSGVFKEMKKAGYIPERDTYVSLISSYSRCGLFDLAMQIYKRMMEAGIYPDVSTY 473
Query: 562 EALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVK 621
A+L + A LF EM+E + + L+ A M L ++
Sbjct: 474 NAVLSALARGGRWEQAEKLFAEMEERDC-KPDEYSYSSLLHAYANAKRLDKMKALSDDIY 532
Query: 622 EGQRIDCGVHDW--NNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIG 679
+RI+ H+W ++ K + +AEKA +R + ++MV+ Y
Sbjct: 533 -SERIE--PHNWLVKTLVLVNSKVNNLAEAEKAFLELRQKRCSLDINVLNAMVSIY---- 585
Query: 680 GKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFID 739
GK V ++ ++ S +++N +S+++ + R G + ++ ++ + D
Sbjct: 586 GKNRMVRKV-EKILSLMKESAINLSAATYNSLMHMYSRLGDCEKCENILTEIKSSGVRPD 644
Query: 740 KYKYRTLFLKYHK 752
+Y Y T+ Y +
Sbjct: 645 RYSYNTVIYAYGR 657
Score = 40.8 bits (94), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 35/162 (21%), Positives = 75/162 (46%), Gaps = 5/162 (3%)
Query: 524 SVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKE 583
+V +++ Y + R+V +L + + I L A+ Y +L+ D ++ E
Sbjct: 576 NVLNAMVSIYGKNRMVRKVEKILSLMKESAINLSAATYNSLMHMYSRLGDCEKCENILTE 635
Query: 584 MKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVK-EGQRIDCGVHDWNNVIHFFCK 642
+K S + R + ++ + + ++L E+K G + D V +N + +
Sbjct: 636 IKSSGV-RPDRYSYNTVIYAYGRKGQMKEASRLFSEMKCSGLKPD--VVTYNIFVKSYVS 692
Query: 643 KRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTE 684
+ ++A + ++ M + G PN +T++S+V GY GK T+
Sbjct: 693 NSMFEEAIELVRYMVTQGCKPNERTYNSIVEGYCR-NGKLTD 733
>gi|115465970|ref|NP_001056584.1| Os06g0111300 [Oryza sativa Japonica Group]
gi|113594624|dbj|BAF18498.1| Os06g0111300 [Oryza sativa Japonica Group]
Length = 978
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 107/512 (20%), Positives = 195/512 (38%), Gaps = 60/512 (11%)
Query: 267 ETTRKAEQLLDIMPRIGVKADSNLLIIMAHIYERNGRREELRKLQRHIDEAVNLSDIQFR 326
E KA L M + + D + I+ IY + G E+ +++ ID+A LSD
Sbjct: 359 EDYSKALSLFSEMEQNKIVPDEVIYGILVRIYGKLGLYEDAQRMFEEIDKAGLLSD---E 415
Query: 327 QFYNCLLSCHLKFGDLNSA--------------SKMVLEMLQRAKEARNSLAAAMLPFNA 372
Q Y + H+ + + A S+ L R A+ + AA F A
Sbjct: 416 QTYVAMAQVHMNVQNYDRALQVLDAMRARNVKPSQFSYSALLRCHVAKEDVDAAEDTFRA 475
Query: 373 VGVNNRTPSEQNVNCTNS----------VDLENSGIIENHILSYEDFTKDRKFVALEAEV 422
++N P +V C N +D + I++ + + F +D LE
Sbjct: 476 --LSNYGPP--DVFCCNDLLRLYMRLGHLDKARALILKMRKEALQ-FDEDLCVTVLEVCC 530
Query: 423 KRVLQTLLGMLQKQVELITTEHGILQPTEKIYIK-LVKAFLE-AGKTKELTHFLIKAEKE 480
K + L + ++ + +L PT+ + ++K+ L+ G ++ ++K +E
Sbjct: 531 KTSINKDTDNLTEVIQNEGSSSKVLNPTDSSTLSMMLKSLLDKPGGLSSVSQLIMKFARE 590
Query: 481 N--------------LQVSHDDAALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVY 526
L DD A+ +I L+QA L E SVY
Sbjct: 591 GSTDEAKFLYEHLTELGAKPDDTAIATLIVQYGQAQQLEQAQKLF-ETASTSFPVGGSVY 649
Query: 527 ASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKE 586
+++ A + E L + G DA L+ Q A+ ++ M
Sbjct: 650 NAMVDALCRCGKTEEAYRLFMELIDQGHNGDAVTISILVTHLTKQGKLYSAVSIYDRMIS 709
Query: 587 SKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRIDCGVHD--WNNVIHFFCKKR 644
S IPRS Q F +++ Q G + K ++ Q + + + + N++ F+ K
Sbjct: 710 SGIPRS-MQTFNIMISVYGQ---GGKLEKAVEMFSAAQELGLPIDEKTYTNMLSFYGKAG 765
Query: 645 LMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEMKSFASSTSMNFD 704
+A RM+ G P +F++M+ YA G + E ++ EM+ + D
Sbjct: 766 KHHEASLLFSRMKEDGIRPGKISFNTMINAYAT-SGLHNEAEIIFQEMQ----KNNHVPD 820
Query: 705 EELLDSVLYTFVRGGFFARANEVVAMMEEGKM 736
+++ + G +++A E + MM M
Sbjct: 821 SHTYLALIRAYTEGKCYSKAEEAIQMMLRSNM 852
>gi|449515696|ref|XP_004164884.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
mitochondrial-like [Cucumis sativus]
Length = 657
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 95/212 (44%), Gaps = 5/212 (2%)
Query: 502 GWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCY 561
G ++ A + M A + + + ++K +A R E L S G Y
Sbjct: 333 GDIENAFSIFHRMKDANILPTDTTLGIIIKGLCKAGRSFEGRDLFNKFVSQGFVPTCMPY 392
Query: 562 EALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVK 621
++ I + + A ++++EM E I S + L+ G + + L KLL ++K
Sbjct: 393 NTIIDGFIKEGNINLASNVYREMCEVGITPS-TVTYTSLIDGFCKGNNIDLALKLLNDMK 451
Query: 622 -EGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGG 680
+G ++D + + +I FCK+R M+ A + L +R G PN ++SM+TG+ +
Sbjct: 452 RKGLKMD--IKAYGTLIDGFCKRRDMKSAHELLNELRGAGLSPNRFIYNSMITGFKNM-N 508
Query: 681 KYTEVTELWGEMKSFASSTSMNFDEELLDSVL 712
E +L+ +M + + L+D +L
Sbjct: 509 NVEEAIDLYKKMVNEGIPCDLKTYTSLIDGLL 540
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 85/215 (39%), Gaps = 34/215 (15%)
Query: 494 VITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAG 553
VIT C+ G + +A L D+M G + +V SL+K Y R L+ + +G
Sbjct: 116 VITACVKEGNVAEALRLKDDMVNCGKSMNLAVATSLMKGYCMQGNLRSALVLVNEISESG 175
Query: 554 IQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKG---CA--QNH 608
+ + Y L+ + A + EMK I RS +++G C QN
Sbjct: 176 LVPNKVTYSVLIDGCCKNGNIEKAFEFYSEMKTKGI-RSSVYSLNSILEGYLKCQSWQNA 234
Query: 609 --------EAG---------LMAKLLQEVKEGQR-----------IDCGVHDWNNVIHFF 640
E+G L++ L +E K + I V +NN+I
Sbjct: 235 FTMFNDALESGLANVFTFNTLLSWLCKEGKMNEACNLWDEVIAKGISPNVVSYNNIILGH 294
Query: 641 CKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGY 675
C+K + A K K M G PNA TF ++ GY
Sbjct: 295 CRKDNINAACKVYKEMLDNGFTPNAVTFTILMDGY 329
Score = 45.8 bits (107), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 40/191 (20%), Positives = 84/191 (43%), Gaps = 7/191 (3%)
Query: 506 QAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALL 565
+A +L ++M L GV +L+A ++ E A++ G++LD Y +
Sbjct: 23 EARELHNKMLLVGVTGDCFTLHVMLRACLKEGNILEAEQHFLQAKARGVELDQEAYSIFV 82
Query: 566 QSKIVQKDTPGALHLFKEMKESK-IPRSGHQEFEMLVKGCAQNHEAGLMAKLLQE-VKEG 623
++ ++ AL L +EM+ + IP G F ++ C + +L + V G
Sbjct: 83 HLLCLKPNSGYALSLLREMRAAGWIPPEG--TFTSVITACVKEGNVAEALRLKDDMVNCG 140
Query: 624 QRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYT 683
+ ++ V +++ +C + ++ A + + G +PN T+ ++ G G
Sbjct: 141 KSMNLAVA--TSLMKGYCMQGNLRSALVLVNEISESGLVPNKVTYSVLIDGCCK-NGNIE 197
Query: 684 EVTELWGEMKS 694
+ E + EMK+
Sbjct: 198 KAFEFYSEMKT 208
>gi|357141282|ref|XP_003572167.1| PREDICTED: pentatricopeptide repeat-containing protein At5g12100,
mitochondrial-like [Brachypodium distachyon]
Length = 686
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 105/480 (21%), Positives = 191/480 (39%), Gaps = 48/480 (10%)
Query: 239 RKKCNAPLIAMKPNTNTFNIALAGCLLFETTRKAEQLLDIMPRIGVKADSNLLIIMAHIY 298
R C+ A PN ++N+ +AG T A +L D MP V + M +
Sbjct: 177 RMGCDG---APAPNAFSYNVVIAGLWKAGTDCDAVKLFDEMPEKAVVPNHITYNTMIDGH 233
Query: 299 ERNGRREE-LRKLQRHIDEAVNLSDIQFRQFYNCLLSCHLKFGDLNSASKMVLEMLQRAK 357
+ G E R + + + + I YN LLS + G + + ++ EM R K
Sbjct: 234 IKKGDLESGFRLWSQMLRHGLKPNVIT----YNVLLSGLCRAGRMGETAAVLDEMASR-K 288
Query: 358 EARNSLAAAMLPFNAVGVNNRTPSEQNVNCTNSVDLENSGIIENHILSY--EDFTKDRKF 415
+ ++L F+ ++RT Q + ++ I + S KD K
Sbjct: 289 MVPDGFTYSIL-FDG---HSRTGDSQTMLSLFEESVKKGVKIGAYTCSILLNGLCKDGKI 344
Query: 416 VALEAEVKRVLQTLL--GMLQKQVELITTEHG--------------------ILQPTEKI 453
++ + VLQTL+ G+LQ V T +G +++P
Sbjct: 345 ----SKAEEVLQTLVNSGLLQTTVIYNTLINGYCQIGDLEGAFSIFQQMKSRLIRPDHIT 400
Query: 454 YIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQAHDLLDE 513
Y L+ + + E +I+ EK + S + +I G L++ +L +
Sbjct: 401 YNALINGLGKVERITEAHDLVIEMEKNGVNPSVE--TFNTLIDAYGRAGQLEKCFIILSD 458
Query: 514 MHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQKD 573
M G++ + Y S++ A+ + + E A+L D + A Y A++ + I
Sbjct: 459 MQEKGLKPNVVSYGSIVNAFCKNGKILEAVAILDDMFIKDVLPGAQVYNAIIDAYIECGS 518
Query: 574 TPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKE-GQRIDCGVHD 632
T A L ++MK S +P S + +L+KG + + +LL ++ G D V
Sbjct: 519 TDQAFMLAEKMKSSGVPPS-IVTYNLLIKGLCKQSQISEAEELLDSLRNYGLAPD--VIS 575
Query: 633 WNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEM 692
+N +I C + A + K M G P+ +T+ + + G+ E+ L+ +M
Sbjct: 576 YNTLISACCYRSNTDRALELEKEMWKCGIKPSPRTYRMLFSSLGG-AGRVHEMENLYQQM 634
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 92/392 (23%), Positives = 159/392 (40%), Gaps = 41/392 (10%)
Query: 249 MKPNTNTFNIALAGCLLFETTRKAEQLLDIMPRIGVKADSNLLIIMAHIYERNGRREELR 308
M P+ T++I G ++ L + + GVK + I+ + ++G+ +
Sbjct: 289 MVPDGFTYSILFDGHSRTGDSQTMLSLFEESVKKGVKIGAYTCSILLNGLCKDGK---IS 345
Query: 309 KLQRHIDEAVNLSDIQFRQFYNCLLSCHLKFGDLNSASKMVLEMLQRAKEARNSLAAAML 368
K + + VN +Q YN L++ + + GDL A + +M R + A++
Sbjct: 346 KAEEVLQTLVNSGLLQTTVIYNTLINGYCQIGDLEGAFSIFQQMKSRLIRPDHITYNALI 405
Query: 369 PFNAVGVNNRTPSEQNVNCTNSVDLENSGIIENHILSYEDFTKDRKFVALEAEVKRVLQT 428
N +G R ++ +++E +G+ S E F ++++
Sbjct: 406 --NGLGKVERITEAHDL----VIEMEKNGVNP----SVETFNTLIDAYGRAGQLEKCFII 455
Query: 429 LLGMLQKQVELITTEHGILQPTEKIYIKLVKAFLEAGKTKE----LTHFLIKAEKENLQV 484
L M +K L+P Y +V AF + GK E L IK QV
Sbjct: 456 LSDMQEKG----------LKPNVVSYGSIVNAFCKNGKILEAVAILDDMFIKDVLPGAQV 505
Query: 485 SHDDAALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTA 544
+ +I I G DQA L ++M +GV S Y L+K + ++ E
Sbjct: 506 YN------AIIDAYIECGSTDQAFMLAEKMKSSGVPPSIVTYNLLIKGLCKQSQISEAEE 559
Query: 545 LLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKI---PRSGHQEFEMLV 601
LL R+ G+ D Y L+ + + +T AL L KEM + I PR+ F L
Sbjct: 560 LLDSLRNYGLAPDVISYNTLISACCYRSNTDRALELEKEMWKCGIKPSPRTYRMLFSSL- 618
Query: 602 KGCAQNHEAGLMAKLLQEVKEGQRIDC-GVHD 632
G + HE M L Q++ + + C G+++
Sbjct: 619 GGAGRVHE---MENLYQQMLDKDVVPCSGIYN 647
>gi|297795313|ref|XP_002865541.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297311376|gb|EFH41800.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 711
Score = 63.5 bits (153), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 58/248 (23%), Positives = 104/248 (41%), Gaps = 40/248 (16%)
Query: 447 LQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQ 506
++P K Y L+K +++ G K+ L+ +E E VS D+ +I ++ G +
Sbjct: 337 IKPRTKAYNALLKGYVKTGPLKDAE--LMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWES 394
Query: 507 AHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQ 566
A +L EM V+ +S V++ LL Y + ++ +L++ +S G++ D Y ++
Sbjct: 395 ARIVLKEMETGDVQPNSFVFSRLLAGYRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVI- 453
Query: 567 SKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRI 626
DT G + +H ++L E E R+
Sbjct: 454 ------DTFGKFNCL-------------------------DHAMTTFDRMLSEGIEPDRV 482
Query: 627 DCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVT 686
WN +I CK AE+ + M G LP A T++ M+ Y ++ ++
Sbjct: 483 T-----WNTLIDCHCKHGRHIVAEEMFEAMERRGCLPCATTYNIMINSYGD-QERWDDMK 536
Query: 687 ELWGEMKS 694
L G+MKS
Sbjct: 537 RLLGKMKS 544
>gi|296085044|emb|CBI28459.3| unnamed protein product [Vitis vinifera]
Length = 973
Score = 63.5 bits (153), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 116/549 (21%), Positives = 206/549 (37%), Gaps = 59/549 (10%)
Query: 249 MKPNTNTFNIALAGCLLFETTRKAEQLLDIMPRIGVKADSNLLIIMAHIYERNGRREELR 308
+ P T+++ + G + +L M G+K ++ + + + + GR EE R
Sbjct: 412 LAPTVLTYSVIINGLCRCGNLQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESR 471
Query: 309 KLQRHIDEAVNLSDIQFRQFYNCLLSCHLKFGDLNSASKMVLEMLQRA-KEARNSLAAAM 367
+ + E L D+ YN L+ K + A ++EML+R + ++ A +
Sbjct: 472 MILERMREQGILPDVFC---YNSLIIGFCKAKRMEEARTYLMEMLERRLRPNAHTYGAFI 528
Query: 368 LPFNAVG---VNNRTPSEQNVNCTNSVDLENSGI----IENHILSYEDFTKDRKFVALEA 420
++ G + +R +E ++C L N GI IE H E
Sbjct: 529 DGYSKAGEMEIADRYFNEM-LSCGV---LPNVGIYTALIEGH--------------CKEG 570
Query: 421 EVKRVLQTLLGMLQKQVELITTEHGILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKE 480
V +L ++V LQ + Y L+ GK E F I +E +
Sbjct: 571 NVTEAFSVFRFILSRRV---------LQDVQT-YSVLIHGLSRNGKMHE--AFGIFSELQ 618
Query: 481 NLQVSHDDAALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPR 540
+ + +I+ G +D+A LL+EM + G+ Y L+ +A
Sbjct: 619 EKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEMCIKGINPDIVTYNILIDGLCKAGEIE 678
Query: 541 EVTALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEML 600
L D G+ + Y A++ K+ A L +EM +P + ++
Sbjct: 679 RAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSKNPTAAFQLLEEMLLRGVPPDAFI-YNVI 737
Query: 601 VKGCAQNHEAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLG 660
+ C + + L QE+ E + +N +I +CK +Q+A L+ M
Sbjct: 738 LNFCCKEEKFEKALDLFQEMLE--KGFASTVSFNTLIEGYCKSGKLQEANHLLEEMIEKQ 795
Query: 661 HLPNAQTFHSMVTGYAAIGGKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGF 720
+PN T+ S++ + G E LW EM+ + + YT + G+
Sbjct: 796 FIPNHVTYTSLID-HNCKAGMMGEAKRLWLEMQE---------RNVMPTAKTYTSLLHGY 845
Query: 721 FARAN--EVVAMMEE---GKMFIDKYKYRTLFLKYHKTLYKGKTPKFQTEAQLKKREAAL 775
N EV A+ EE + DK Y + Y + + K + E +K
Sbjct: 846 HNIGNMSEVSALFEEMVAKGIEPDKMTYYVMIDAYCREGNVMEACKLKDEILVKGMPMKS 905
Query: 776 GFKKWLGLC 784
GF+ L C
Sbjct: 906 GFRLGLPTC 914
Score = 59.7 bits (143), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 110/562 (19%), Positives = 221/562 (39%), Gaps = 80/562 (14%)
Query: 247 IAMKPNTNTFNIALAGCLLFETTRKAEQLLDIMPRIGVKADSNLLI---IMAHIYERNGR 303
+ +KP T+N + G + +A ++ D M G++A NL+I ++ + +
Sbjct: 305 VGLKPEPITYNALIDGFMRQGDIEQAFRIKDEMVACGIEA--NLIIWNTLLNGVCKAGKM 362
Query: 304 REELRKLQRHIDEAVNLSDIQFRQFYNCLLSCHLKFGDLNSASKMVLEMLQRAKEARNSL 363
+ L +Q +++ V Q Y+ L+ H + ++ A +++ EM +R L
Sbjct: 363 EKALEIMQEMMEKGVEPDS----QTYSLLIEGHCRGQNMARAFELLDEMKKR------KL 412
Query: 364 AAAMLPFNAVGVNNRTPSEQNVNCTNSV--DLENSGIIENHILSYEDFTKDRKFVALEAE 421
A +L ++ + N N+ TN++ ++ +G+ N ++ T K +E E
Sbjct: 413 APTVLTYSV--IINGLCRCGNLQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVE-E 469
Query: 422 VKRVLQTLLGMLQKQVELITTEHGILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKEN 481
+ +L+ + E GIL P Y L+ F +A + +E +L++ +
Sbjct: 470 SRMILERM------------REQGIL-PDVFCYNSLIIGFCKAKRMEEARTYLMEMLERR 516
Query: 482 LQVSHDDAALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPRE 541
L+ + G I G ++ A +EM GV + +Y +L++ + + E
Sbjct: 517 LR--PNAHTYGAFIDGYSKAGEMEIADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTE 574
Query: 542 VTALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLV 601
++ R S + D Y L+ A +F E++E + + + L+
Sbjct: 575 AFSVFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFT-YNSLI 633
Query: 602 KGCAQNHEAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGH 661
G + ++LL+E+ + I+ + +N +I CK ++ A+ + G
Sbjct: 634 SGSCKQGNVDKASQLLEEMCI-KGINPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGL 692
Query: 662 LPNAQTFHSMVTGYAAIGG----------------------------------KYTEVTE 687
PN T+ +MV GY K+ + +
Sbjct: 693 TPNCVTYAAMVDGYCKSKNPTAAFQLLEEMLLRGVPPDAFIYNVILNFCCKEEKFEKALD 752
Query: 688 LWGEM--KSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFIDKYKYRT 745
L+ EM K FAS+ S N +++ + + G AN ++ M E + + Y +
Sbjct: 753 LFQEMLEKGFASTVSFN-------TLIEGYCKSGKLQEANHLLEEMIEKQFIPNHVTYTS 805
Query: 746 LFLKYHKTLYKGKTPKFQTEAQ 767
L K G+ + E Q
Sbjct: 806 LIDHNCKAGMMGEAKRLWLEMQ 827
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 59/269 (21%), Positives = 123/269 (45%), Gaps = 13/269 (4%)
Query: 410 TKDRKFVALE-AEVKRVLQTLLGMLQKQVELITTEHGILQPTEKIYIKLVKAFLEAGKTK 468
KD K V LE E R+L + + + V+ G++ P Y L+ F +++
Sbjct: 240 VKDAKRVLLEMGEKARLLDEAIELKRSMVD-----KGLV-PDLYTYDILINGFCMEKRSR 293
Query: 469 ELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYAS 528
E L+ E ++ + + +I + G ++QA + DEM G+ A+ ++ +
Sbjct: 294 EAKLMLL--EMIDVGLKPEPITYNALIDGFMRQGDIEQAFRIKDEMVACGIEANLIIWNT 351
Query: 529 LLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESK 588
LL +A + + ++++ G++ D+ Y L++ ++ A L EMK+ K
Sbjct: 352 LLNGVCKAGKMEKALEIMQEMMEKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRK 411
Query: 589 IPRSGHQEFEMLVKG-CAQNHEAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQ 647
+ + + +++ G C + G A L + V G + + V+ H K+ ++
Sbjct: 412 LAPT-VLTYSVIINGLCRCGNLQGTNAILREMVMNGLKPNAVVYTTLMTAH--AKEGRVE 468
Query: 648 DAEKALKRMRSLGHLPNAQTFHSMVTGYA 676
++ L+RMR G LP+ ++S++ G+
Sbjct: 469 ESRMILERMREQGILPDVFCYNSLIIGFC 497
>gi|223635621|sp|Q940A6.2|PP325_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g19440, chloroplastic; Flags: Precursor
Length = 838
Score = 63.5 bits (153), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 127/622 (20%), Positives = 235/622 (37%), Gaps = 72/622 (11%)
Query: 122 FPRKTLVNKILTSFVESLDSKWLEKAYGLVEQAFEEGKQILLEKEPLIYLSL----GLSK 177
FP KT N +LTS V + + + +A+ +V + P +YL K
Sbjct: 236 FPSKTTCNILLTSLVRANEFQKCCEAFDVVCKGVS----------PDVYLFTTAINAFCK 285
Query: 178 CGLPVPASTILRKLVATEQYPPVTAWSAILAHMSLTA--PGAYLAAELILEIGY------ 229
G A + K+ P V ++ ++ + + A++ E ++E G
Sbjct: 286 GGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLIT 345
Query: 230 --LFQDGRVDPRKKCNAPLI-------AMKPNTNTFNIALAGCLLFETTRKAEQLLDIMP 280
+ G ++ +A + PN +N + + + KA ++ D+M
Sbjct: 346 YSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMV 405
Query: 281 RIGVKADSNLLIIMAHIYERNGRREEL-RKLQRHIDEAVNLSDIQFRQFYNCLLSCHLKF 339
G+ S+ + Y +NG+ + R L+ + N++ F CLL HL F
Sbjct: 406 SKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVI-CLLCSHLMF 464
Query: 340 GDLNSASKMVLEMLQRAKEARNSLAAAMLPFNAVGVNNRTPSE---QNVNCTNSVDLENS 396
+SA + V EML R L ++ + E Q +N VD S
Sbjct: 465 ---DSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTS 521
Query: 397 -----GIIENHILSYEDFTKDRKFVALEAEVKRV-LQTLLGMLQKQVELI--------TT 442
G+ E L E F ++ + + RV TL+ + +L
Sbjct: 522 NALLHGLCEAGKLD-EAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMV 580
Query: 443 EHGILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLG 502
+ G L+P Y L+ K +E F ++ + D +I C
Sbjct: 581 KRG-LKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGML--PDVYTYSVMIDGCCKAE 637
Query: 503 WLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYE 562
++ + DEM V+ ++ VY L++AY + R L D + GI +++ Y
Sbjct: 638 RTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYT 697
Query: 563 ALLQSKIVQKDTPGALHLFKEMK-ESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVK 621
+L++ + A LF+EM+ E P H + L+ G + + + LL+E+
Sbjct: 698 SLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFH--YTALIDGYGKLGQMVKVECLLREM- 754
Query: 622 EGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGG- 680
+ + + +I + + + +A + L MR G +P++ T+ + GY GG
Sbjct: 755 HSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGV 814
Query: 681 ----------KYTEVTELWGEM 692
Y + E W ++
Sbjct: 815 LEAFKGSDEENYAAIIEGWNKL 836
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 66/270 (24%), Positives = 98/270 (36%), Gaps = 36/270 (13%)
Query: 457 LVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQAHDLLDEMHL 516
L+ EAGK E F I+ E D + +I+ C LD+A LDEM
Sbjct: 524 LLHGLCEAGKLDE--AFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVK 581
Query: 517 AGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQKDTPG 576
G++ + Y+ L+ N+ E D + G+ D Y ++ + T
Sbjct: 582 RGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEE 641
Query: 577 ALHLFKEMKESKIP--------------RSGHQEF------EMLVKGCAQNHEA------ 610
F EM + RSG +M KG + N
Sbjct: 642 GQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIK 701
Query: 611 GLM-------AKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLP 663
G+ AKLL E + ++ V + +I + K M E L+ M S P
Sbjct: 702 GMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHP 761
Query: 664 NAQTFHSMVTGYAAIGGKYTEVTELWGEMK 693
N T+ M+ GYA G TE + L EM+
Sbjct: 762 NKITYTVMIGGYAR-DGNVTEASRLLNEMR 790
>gi|125540047|gb|EAY86442.1| hypothetical protein OsI_07823 [Oryza sativa Indica Group]
Length = 703
Score = 63.5 bits (153), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 65/249 (26%), Positives = 105/249 (42%), Gaps = 21/249 (8%)
Query: 504 LDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEA 563
+D A DL D+M L G YA+L++ + E R E L + Q D Y A
Sbjct: 62 VDVARDLFDKMPLRGFAQDVVSYAALIEGFCETGRIDEAVELFGEMD----QPDMHMYAA 117
Query: 564 LLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEG 623
L++ L + + MKE R + + +V +A ++LQE+ E
Sbjct: 118 LVKGLCKAGRGEEGLLMLRRMKELGW-RPSTRAYAAVVDFRCWERKAKEAEEMLQEMFEK 176
Query: 624 QRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYT 683
C V VI+ +CK+ M DA + L+ M+ G PN T++++V G+ GK
Sbjct: 177 GLAPC-VVTCTAVINAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCN-EGKVH 234
Query: 684 EVTELWGEMKSFASSTSMNFDEELLDSVLYT-FVRG----GFFARANEVVAMMEEGKMFI 738
+ L +M+ + D+V Y +RG G A ++ +ME +
Sbjct: 235 KAMALLNKMRVCGVNP---------DAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIA 285
Query: 739 DKYKYRTLF 747
D+Y Y L
Sbjct: 286 DQYTYNALI 294
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/233 (22%), Positives = 93/233 (39%), Gaps = 6/233 (2%)
Query: 448 QPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQA 507
QP +Y LVK +AG+ +E L+ + L A V+ +A
Sbjct: 109 QPDMHMYAALVKGLCKAGRGEE--GLLMLRRMKELGWRPSTRAYAAVVDFRCWERKAKEA 166
Query: 508 HDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQS 567
++L EM G+ +++ AY + R + +L + G + + Y AL+Q
Sbjct: 167 EEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQG 226
Query: 568 KIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKG-CAQNHEAGLMAKLLQEVKEGQRI 626
+ A+ L +M+ + + +L++G C H A L + EG +
Sbjct: 227 FCNEGKVHKAMALLNKMRVCGVNPDA-VTYNLLIRGQCIDGHIES--AFRLLRLMEGDGL 283
Query: 627 DCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIG 679
+ +N +I+ CK A + + G PNA TF+S++ G G
Sbjct: 284 IADQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSG 336
Score = 48.5 bits (114), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 42/197 (21%), Positives = 82/197 (41%), Gaps = 5/197 (2%)
Query: 502 GWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCY 561
G DQA L D + G++ ++ + SL+ ++ + L SAG D Y
Sbjct: 301 GRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSGKVDIAWKFLEKMVSAGCTPDTYTY 360
Query: 562 EALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQE-V 620
+ ++ K + L EM + + S + +++ + GL+A+ E V
Sbjct: 361 SSFIEHLCKMKGSQEGLSFIGEMLQKDVKPS-TVNYTIVIHKLLKERNYGLVARTWGEMV 419
Query: 621 KEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGG 680
G D V + + +C + + +AE L M G + +++++ G+A+I G
Sbjct: 420 SSGCNPD--VVTYTTSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAYNTLMDGHASI-G 476
Query: 681 KYTEVTELWGEMKSFAS 697
+ + +M S AS
Sbjct: 477 QTDHAVSILKQMTSVAS 493
>gi|115450929|ref|NP_001049065.1| Os03g0165100 [Oryza sativa Japonica Group]
gi|113547536|dbj|BAF10979.1| Os03g0165100 [Oryza sativa Japonica Group]
Length = 695
Score = 63.5 bits (153), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 62/255 (24%), Positives = 111/255 (43%), Gaps = 16/255 (6%)
Query: 497 LCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQL 556
LC S W D+A ++ EM GV + L+ + E + ++ R GI+
Sbjct: 175 LCRSGMW-DKAWEVFKEMDDFGVAPDVRSFTILIGGFCRVGEIEEALKIYKEMRHRGIKP 233
Query: 557 DASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKL 616
D + L+ + A+ +EM+ + G + M++ G + AGLM+
Sbjct: 234 DLVSFSCLIGLFARRGKMDHAMAYLREMRCFGLVPDG-VIYTMVIGGFCR---AGLMSDA 289
Query: 617 LQEVKEGQRIDCG----VHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMV 672
L+ E + CG V +N +++ CK+R + DAE L MR G P+ TF +++
Sbjct: 290 LRVRDE--MVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTTLI 347
Query: 673 TGYAAIGGKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMME 732
GY I GK + +L+ M + + D ++++ R G +AN++ M
Sbjct: 348 HGY-CIEGKLDKALQLFDTM----LNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMH 402
Query: 733 EGKMFIDKYKYRTLF 747
++F + Y L
Sbjct: 403 SREIFPNHVTYSILI 417
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 64/304 (21%), Positives = 117/304 (38%), Gaps = 9/304 (2%)
Query: 444 HGILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGW 503
H ++P + L+ F GK +L E + D VI G
Sbjct: 228 HRGIKPDLVSFSCLIGLFARRGKMDHAMAYL--REMRCFGLVPDGVIYTMVIGGFCRAGL 285
Query: 504 LDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEA 563
+ A + DEM G Y +LL + R + LL + R G+ D +
Sbjct: 286 MSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTT 345
Query: 564 LLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEG 623
L+ ++ AL LF M ++ R + L+ G + + L ++
Sbjct: 346 LIHGYCIEGKLDKALQLFDTMLNQRL-RPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSR 404
Query: 624 QRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYT 683
+ V ++ +I C+K ++DA L M + G LPN T++S++ GY G
Sbjct: 405 EIFPNHV-TYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSK 463
Query: 684 EVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFIDKYKY 743
L M + S + + +++++ +++ A +++ MME+ K+ D Y
Sbjct: 464 GQKFLQKMMVNKVSPDLITY-----NTLIHGYIKEDKMHDAFKLLNMMEKEKVQPDVVTY 518
Query: 744 RTLF 747
L
Sbjct: 519 NMLI 522
Score = 48.9 bits (115), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 89/448 (19%), Positives = 173/448 (38%), Gaps = 34/448 (7%)
Query: 248 AMKPNTNTFNIALAGCLLFETTRKAEQLLDIMPRIGVKADSNLLIIMAHIYERNGRREEL 307
+KP T+N L G KA ++ M GV D I+ + R G EE
Sbjct: 160 GLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRSFTILIGGFCRVGEIEEA 219
Query: 308 RKLQRHIDEAVNLSDIQFRQFYNCLLSCHLKFGDLNSASKMVLEMLQRAKEARNSLAAAM 367
K+ + + D+ ++CL+ + G ++ A + EM + +
Sbjct: 220 LKIYKEMRHRGIKPDLVS---FSCLIGLFARRGKMDHAMAYLREMRCFGLVPDGVIYTMV 276
Query: 368 LP-FNAVGVNNRT--PSEQNVNCTNSVDLENSGIIENHILSYEDFTKDRKFVALEAEVKR 424
+ F G+ + ++ V C D+ + N + K+R+ L+AE
Sbjct: 277 IGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGL------CKERRL--LDAE--- 325
Query: 425 VLQTLLGMLQKQVELITTEHGILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQV 484
G+L + E G+ P + L+ + GK + + L+
Sbjct: 326 ------GLLNEM-----RERGV-PPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLR- 372
Query: 485 SHDDAALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTA 544
D +I G LD+A+DL D+MH + + Y+ L+ ++ E + +
Sbjct: 373 -PDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFG 431
Query: 545 LLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGC 604
L + + GI + Y ++++ + ++M +K+ + L+ G
Sbjct: 432 FLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKV-SPDLITYNTLIHGY 490
Query: 605 AQNHEAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPN 664
+ + KLL + E +++ V +N +I+ F +Q+A ++M + G P+
Sbjct: 491 IKEDKMHDAFKLLN-MMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPD 549
Query: 665 AQTFHSMVTGYAAIGGKYTEVTELWGEM 692
T+ SM+ G+ G E +L EM
Sbjct: 550 RYTYMSMINGHVT-AGNSKEAFQLHDEM 576
>gi|242046334|ref|XP_002461038.1| hypothetical protein SORBIDRAFT_02g039560 [Sorghum bicolor]
gi|241924415|gb|EER97559.1| hypothetical protein SORBIDRAFT_02g039560 [Sorghum bicolor]
Length = 595
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 70/320 (21%), Positives = 123/320 (38%), Gaps = 45/320 (14%)
Query: 437 VELITTEHGILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVIT 496
V++ H +P Y +++ + +T E L + V D G +I
Sbjct: 109 VDMSREAHPAARPNAVSYTTVMRGLCASRRTGEAVALLRSMQASG--VRADVVTYGTLIR 166
Query: 497 LCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQL 556
LD A +LLDEM +GV+ + VY+ LL+ Y + R ++V + D GI+
Sbjct: 167 GLCDASELDAALELLDEMCGSGVQPNVVVYSCLLRGYCRSGRWQDVGKVFEDMSRRGIKP 226
Query: 557 DASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKL 616
D + L+ KE K ++ + M+ +G N
Sbjct: 227 DVIMFTGLIDDLC---------------KEGKTGKAAKVKDMMVQRGLEPN--------- 262
Query: 617 LQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYA 676
V +N +I+ CK+ +++A K M G P+ T+++++ G +
Sbjct: 263 -------------VVTYNVLINSLCKEGSVREALTLRKEMDDKGVAPDVVTYNTLIAGLS 309
Query: 677 AIGGKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKM 736
+ + E EM T + D +SV++ + G +A +V MM E
Sbjct: 310 GV-LEMDEAMSFLEEM--IQGDTVVEPDVVTFNSVIHGLCKIGRMTQAVKVREMMAERGC 366
Query: 737 FIDKYKYRTL---FLKYHKT 753
+ Y L FL+ HK
Sbjct: 367 MCNLVTYNYLIGGFLRVHKV 386
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 105/209 (50%), Gaps = 14/209 (6%)
Query: 507 AHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQ 566
A +L+DE+ ++G+ S Y+ L+ + + L R GI+ + Y LL
Sbjct: 389 AMNLMDELAISGLEPDSFTYSILINGFSKMWEVDRAEKFLCTMRQRGIKAELFHYIPLLA 448
Query: 567 SKIVQKDTPGALHLFKEMKESKIPRSGHQE--FEMLVKGCAQNHEAGLMAKLLQE-VKEG 623
+ Q A+ LF EM ++ G + ++ G ++ + + +L+Q+ + EG
Sbjct: 449 AMCQQGMMERAMGLFNEMDKN----CGLDAIAYSTMIHGACKSGDMKTVKQLIQDMLDEG 504
Query: 624 QRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYT 683
D ++ +I+ + K +++AE+ LK+M + G +P+ F S++ GY+A G+
Sbjct: 505 LAPD--AVTYSMLINMYAKLGDLEEAERVLKQMTASGFVPDVAVFDSLIKGYSA-EGQTD 561
Query: 684 EVTELWGEMKSFASSTSMNFDEELLDSVL 712
+V +L EM+ + ++ FD +++ +++
Sbjct: 562 KVLKLIHEMR----AKNVAFDPKIISTII 586
>gi|224136626|ref|XP_002322376.1| predicted protein [Populus trichocarpa]
gi|222869372|gb|EEF06503.1| predicted protein [Populus trichocarpa]
Length = 715
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 87/376 (23%), Positives = 146/376 (38%), Gaps = 70/376 (18%)
Query: 457 LVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQAHDLLDEMHL 516
+V+ F E GK +E + +I+ E L ++ L V + +G + A ++ DEM +
Sbjct: 167 MVRVFAEIGKFQEAVNMVIEMENHGLVLTV--RTLNCVTGVAGEMGLVGYAENVFDEMRV 224
Query: 517 AGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLD-ASCYEALLQSKIVQKDTP 575
GV S Y + AY R + L+D G +D A+C L+ S +K
Sbjct: 225 RGVCPDSVSYKLMAIAYCRMGRISDTDRWLKDMVRRGFVVDNATC--TLMISTFCEKGFA 282
Query: 576 GALHLFKE---------------------MKESKIPRSGHQEFEMLVKGCAQN---HEA- 610
+ + + K I ++ EM+ KG N H A
Sbjct: 283 SRVFWYFDKWVELGLKPNLINFTSLINGLCKRGSIKQAFEMLEEMVKKGWKPNVYTHTAL 342
Query: 611 --GLMAK--------LLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLG 660
GL K L ++ VH + ++IH +CK+ + AE L RM+ G
Sbjct: 343 IDGLCKKGWTEKAFRLFLKLVRSDDYKPNVHTYTSMIHGYCKEDKLNRAEMLLSRMKEQG 402
Query: 661 HLPNAQTFHSMVTGYAAIGG--KYTEVTELWGEMKSFASSTSMN-FDEELL--------- 708
+PN +T+ ++ G++ G K E+ +L G+ A+ + N F + L
Sbjct: 403 LVPNTKTYTCLIDGHSKAGNFEKAYELMDLMGKEGFSANIFTYNAFIDSLCKKGRFLEAC 462
Query: 709 -------------DSVLYTFVRGGFFARANEVVAMMEEGKMF-----IDKYKYRTLFLKY 750
D+V YT + RA+ A++ KMF D + Y TL +
Sbjct: 463 KLLKKGFRLGLQADTVTYTILISELCRRADTREALVFFSKMFKAGVQPDMHTYNTLIAAF 522
Query: 751 HKTLYKGKTPKFQTEA 766
+ ++ K EA
Sbjct: 523 SRQRRMEESEKLFAEA 538
Score = 55.8 bits (133), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 70/175 (40%), Gaps = 37/175 (21%)
Query: 502 GWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCY 561
G ++A++L+D M G A+ Y + + + + R E LL+ G+Q D Y
Sbjct: 421 GNFEKAYELMDLMGKEGFSANIFTYNAFIDSLCKKGRFLEACKLLKKGFRLGLQADTVTY 480
Query: 562 EALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVK 621
L+ + DT AL F +M K
Sbjct: 481 TILISELCRRADTREALVFFSKM-----------------------------------FK 505
Query: 622 EGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYA 676
G + D +H +N +I F ++R M+++EK LG +P +T+ SM+ GY
Sbjct: 506 AGVQPD--MHTYNTLIAAFSRQRRMEESEKLFAEAVGLGLVPTKETYTSMICGYC 558
>gi|297848938|ref|XP_002892350.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297338192|gb|EFH68609.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 493
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 65/302 (21%), Positives = 119/302 (39%), Gaps = 40/302 (13%)
Query: 480 ENLQVSHDDAALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRP 539
E L +SHD + +I L A L +M G S + SL+ + NR
Sbjct: 100 EILGISHDLYSFSTLIDCFCRCSRLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRI 159
Query: 540 REVTALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEM 599
+E +L+ G + + Y ++ S + AL + M++ I R +
Sbjct: 160 QEAMSLVDQIVGLGYEPNVVIYNTIIDSLCENRQVDTALDVLNHMEKMGI-RPDVITYNS 218
Query: 600 LVKGCAQNHEAGLMAKLLQEV--------------------KEGQ--------------R 625
L+ + + G+ A++L ++ KEGQ
Sbjct: 219 LITRLFHSGKWGVSARILSDMMRMGIHPDVITFSAMIDVFGKEGQLLEAKKQYDEMIQRS 278
Query: 626 IDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEV 685
+D + +N++I+ C L+ +A+K L M S G PNA T++++V GY K V
Sbjct: 279 VDPNIVTYNSLINGLCIHGLLDEAKKVLNFMVSKGFFPNAVTYNTLVNGYC----KSKRV 334
Query: 686 TELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFIDKYKYRT 745
+ ++ S ++ D +++ + + G F A +V+A M + D Y +
Sbjct: 335 DDAM-KILCVMSHDGVDGDTFTYNTLYQGYCQAGQFNAAEKVLARMVSCGVLPDIYTFNM 393
Query: 746 LF 747
L
Sbjct: 394 LL 395
Score = 43.9 bits (102), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 76/180 (42%), Gaps = 7/180 (3%)
Query: 497 LCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQL 556
LCI G LD+A +L+ M G ++ Y +L+ Y ++ R + +L G+
Sbjct: 293 LCIH-GLLDEAKKVLNFMVSKGFFPNAVTYNTLVNGYCKSKRVDDAMKILCVMSHDGVDG 351
Query: 557 DASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKL 616
D Y L Q A + M + + F ML+ G E G + K
Sbjct: 352 DTFTYNTLYQGYCQAGQFNAAEKVLARMVSCGVLPDIYT-FNMLLDGLC---EHGKIEKA 407
Query: 617 LQEVKEGQRID--CGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTG 674
L ++++ Q+ + G+ +N +I CK ++DA + G P+ T+ +M+ G
Sbjct: 408 LVKLEDLQKSETVVGIITYNIIIKGMCKANKVEDAWYLFCSLALKGVSPDVITYTTMMIG 467
>gi|297801450|ref|XP_002868609.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297314445|gb|EFH44868.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 526
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 117/277 (42%), Gaps = 18/277 (6%)
Query: 502 GWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCY 561
G +D A L ++M G+R +Y SL+ + R R+ LLR I+ D +
Sbjct: 190 GHVDNALSLFNQMENYGIRPDVVMYTSLVNGLCNSGRWRDADLLLRGMMKRKIKPDVITF 249
Query: 562 EALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNH--EAGLMAKLLQE 619
AL+ + + + A L+ EM + I + ++ C + EA M L++
Sbjct: 250 NALIDAFVKEGKLLDAKELYNEMIQMSIAPNIFTYTSLINGLCMEGRLDEARQMFYLMET 309
Query: 620 VKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIG 679
+G D V + ++I+ FCK + ++DA K M G N T+ +++ G+ +
Sbjct: 310 --KGCFPD--VVAYTSLINGFCKCKKVEDAMKIFYEMSQKGLTGNTITYTTLIQGFGLV- 364
Query: 680 GKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEE-GKMFI 738
GK E++G M S ++ LL + Y + N+ + + E+ K I
Sbjct: 365 GKPNVAQEVFGHMVSRGVPPNIRTYNVLLHCLCYN-------GKVNKALMIFEDMQKREI 417
Query: 739 DKY--KYRTLFLKYHKTLYKGKTPK-FQTEAQLKKRE 772
D RT + H Y GK K ++KR+
Sbjct: 418 DGVPPNIRTYNVLLHGLCYNGKLEKALMVFGDMQKRD 454
Score = 47.0 bits (110), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 48/217 (22%), Positives = 88/217 (40%), Gaps = 18/217 (8%)
Query: 507 AHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQ 566
A L ++ G + SL+ + NR E +++ GI+ D Y ++
Sbjct: 125 ASSFLGKLMKLGFEPDIFTFTSLINGFCLGNRIEEAMSMVNQMVEMGIKPDVVIYTTIID 184
Query: 567 SKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQN---HEAGLMAKLLQEVKEG 623
S AL LF +M+ I R + LV G + +A L+ + + +
Sbjct: 185 SLCKNGHVDNALSLFNQMENYGI-RPDVVMYTSLVNGLCNSGRWRDADLLLRGMMK---- 239
Query: 624 QRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYT 683
++I V +N +I F K+ + DA++ M + PN T+ S++ G + G+
Sbjct: 240 RKIKPDVITFNALIDAFVKEGKLLDAKELYNEMIQMSIAPNIFTYTSLINGL-CMEGRLD 298
Query: 684 EVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGF 720
E +++ M++ D V YT + GF
Sbjct: 299 EARQMFYLMETKGC---------FPDVVAYTSLINGF 326
Score = 41.2 bits (95), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 55/257 (21%), Positives = 103/257 (40%), Gaps = 22/257 (8%)
Query: 447 LQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQ 506
++P +Y LV +G+ ++ L K ++ D +I + G L
Sbjct: 207 IRPDVVMYTSLVNGLCNSGRWRDADLLLRGMMKR--KIKPDVITFNALIDAFVKEGKLLD 264
Query: 507 AHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQ 566
A +L +EM + + Y SL+ R E + + G D Y +L+
Sbjct: 265 AKELYNEMIQMSIAPNIFTYTSLINGLCMEGRLDEARQMFYLMETKGCFPDVVAYTSLIN 324
Query: 567 SKIVQKDTPGALHLFKEMKESKIPRSGHQ-EFEMLVKGCAQNHEAGLMAK--LLQEVKEG 623
K A+ +F EM + + +G+ + L++G GL+ K + QEV G
Sbjct: 325 GFCKCKKVEDAMKIFYEMSQKGL--TGNTITYTTLIQG------FGLVGKPNVAQEV-FG 375
Query: 624 QRIDCGV----HDWNNVIHFFCKKRLMQDAEKALKRMRSL---GHLPNAQTFHSMVTGYA 676
+ GV +N ++H C + A + M+ G PN +T++ ++ G
Sbjct: 376 HMVSRGVPPNIRTYNVLLHCLCYNGKVNKALMIFEDMQKREIDGVPPNIRTYNVLLHGLC 435
Query: 677 AIGGKYTEVTELWGEMK 693
GK + ++G+M+
Sbjct: 436 Y-NGKLEKALMVFGDMQ 451
Score = 39.7 bits (91), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 38/175 (21%), Positives = 76/175 (43%), Gaps = 7/175 (4%)
Query: 504 LDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEA 563
++ A + EM G+ ++ Y +L++ + +P + S G+ + Y
Sbjct: 332 VEDAMKIFYEMSQKGLTGNTITYTTLIQGFGLVGKPNVAQEVFGHMVSRGVPPNIRTYNV 391
Query: 564 LLQSKIVQKDTPGALHLFKEMKESKIPR--SGHQEFEMLVKGCAQNHEAGLMAKLLQEVK 621
LL AL +F++M++ +I + + +L+ G N G + K L
Sbjct: 392 LLHCLCYNGKVNKALMIFEDMQKREIDGVPPNIRTYNVLLHGLCYN---GKLEKALMVFG 448
Query: 622 EGQR--IDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTG 674
+ Q+ +D G+ + +I CK ++DA + S G PN T+ +M++G
Sbjct: 449 DMQKRDMDIGIITYTIIIQGMCKAGKVKDALNLFCSLPSKGVKPNVVTYTTMISG 503
>gi|326504498|dbj|BAJ91081.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 793
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 62/279 (22%), Positives = 111/279 (39%), Gaps = 7/279 (2%)
Query: 505 DQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEAL 564
D+A +L EM L G S Y SL+ +Y++ +E L + GIQ D Y L
Sbjct: 301 DEAIGVLKEMELGGCPPSVVTYNSLISSYVKDGLLKEAAELKEEMEVKGIQPDVITYTTL 360
Query: 565 LQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQ 624
+ A+ + EM + + + L+K + M + +++
Sbjct: 361 ISGLDRAGKIDAAIGTYDEMLRNGC-KPNLCTYNALIKLHGVRGKFPEMMAVFDDLRSAG 419
Query: 625 RIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTE 684
+ V WN ++ F + L + K M+ G++P T+ S+++ Y+ G + +
Sbjct: 420 FVP-DVVTWNTLLAVFGQNGLDSEVSGVFKEMKKSGYVPERDTYVSLISSYSRC-GLFDQ 477
Query: 685 VTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFIDKYKYR 744
E++ M + D ++VL RGG + +A ++ A ME D+ Y
Sbjct: 478 SMEIYKRM----IEAGIYPDISTYNAVLSALARGGRWEQAEKLFAEMENLDCRPDELSYS 533
Query: 745 TLFLKYHKTLYKGKTPKFQTEAQLKKREAALGFKKWLGL 783
+L Y K + +K E+ G K L L
Sbjct: 534 SLLHAYANAKKLDKMKALSEDIYAEKIESHHGLVKTLVL 572
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 59/242 (24%), Positives = 103/242 (42%), Gaps = 20/242 (8%)
Query: 443 EHGILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLG 502
E G P+ Y L+ ++++ G KE +K E E + D +I+ G
Sbjct: 311 ELGGCPPSVVTYNSLISSYVKDGLLKEAAE--LKEEMEVKGIQPDVITYTTLISGLDRAG 368
Query: 503 WLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYE 562
+D A DEM G + + Y +L+K + + E+ A+ D RSAG D +
Sbjct: 369 KIDAAIGTYDEMLRNGCKPNLCTYNALIKLHGVRGKFPEMMAVFDDLRSAGFVPDVVTWN 428
Query: 563 ALLQ---SKIVQKDTPGALHLFKEMKESK-IPRSGHQEFEMLVKGCAQNHEAGLMAKLLQ 618
LL + + G +FKEMK+S +P E + V + GL + ++
Sbjct: 429 TLLAVFGQNGLDSEVSG---VFKEMKKSGYVP-----ERDTYVSLISSYSRCGLFDQSME 480
Query: 619 EVKEGQRIDCGVHD----WNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTG 674
K + I+ G++ +N V+ + + AEK M +L P+ ++ S++
Sbjct: 481 IYK--RMIEAGIYPDISTYNAVLSALARGGRWEQAEKLFAEMENLDCRPDELSYSSLLHA 538
Query: 675 YA 676
YA
Sbjct: 539 YA 540
Score = 49.3 bits (116), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 79/175 (45%), Gaps = 10/175 (5%)
Query: 523 SSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQ--SKIVQ--KDTPGAL 578
+S Y +L+ A+ A+R R+ A+ R + GIQ Y +L SKI KD +
Sbjct: 178 ASAYTALVSAFSRASRFRDAVAVFRRMVANGIQPAIVTYNVVLHVYSKIAVPWKDV---V 234
Query: 579 HLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRIDCGVHDWNNVIH 638
L MK IP + + L+ C + AK+ E++ + +N+++
Sbjct: 235 ALVDSMKNDGIPLDRYT-YNTLISCCRRGALYKEAAKVFDEMRAAG-FEPDKVTFNSLLD 292
Query: 639 FFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEMK 693
+ K R+ +A LK M G P+ T++S+++ Y G E EL EM+
Sbjct: 293 VYGKARMHDEAIGVLKEMELGGCPPSVVTYNSLISSYVK-DGLLKEAAELKEEME 346
Score = 42.0 bits (97), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 124/635 (19%), Positives = 236/635 (37%), Gaps = 149/635 (23%)
Query: 184 ASTILRKLVATEQYPPVTAWSAILAHMSLTAPGAYLAAELILEIGYLFQD--GRVDPRKK 241
A + R++VA P + ++ +L S +I ++D VD K
Sbjct: 197 AVAVFRRMVANGIQPAIVTYNVVLHVYS--------------KIAVPWKDVVALVDSMKN 242
Query: 242 CNAPLIAMKPNTNTFNIALAGCLLFETTRKAEQLLDIMPRIGVKADSNLLIIMAHIYERN 301
PL + T+N ++ C ++A ++ D M G + D + +Y +
Sbjct: 243 DGIPL-----DRYTYNTLISCCRRGALYKEAAKVFDEMRAAGFEPDKVTFNSLLDVYGK- 296
Query: 302 GRREELRKLQRHIDEAVN-LSDIQFRQ------FYNCLLSCHLKFGDLNSASKMVLEM-- 352
R DEA+ L +++ YN L+S ++K G L A+++ EM
Sbjct: 297 ---------ARMHDEAIGVLKEMELGGCPPSVVTYNSLISSYVKDGLLKEAAELKEEMEV 347
Query: 353 ----------------LQRAKEA-----------RNSLAAAMLPFNAV----GVNNRTPS 381
L RA + RN + +NA+ GV + P
Sbjct: 348 KGIQPDVITYTTLISGLDRAGKIDAAIGTYDEMLRNGCKPNLCTYNALIKLHGVRGKFPE 407
Query: 382 EQNVNCTNSVDLENSGIIENHILSYEDFTKDRKFVALEAEVKRVLQTLLGMLQKQVELIT 441
V DL ++G + + ++++ L++EV V + +
Sbjct: 408 MMAV----FDDLRSAGFVPD-VVTWNTLLAVFGQNGLDSEVSGVFKEM------------ 450
Query: 442 TEHGILQPTEKIYIKLVKAFLEAG---KTKELTHFLIKAEKENLQVSHDDAALGHVITLC 498
+ G + P Y+ L+ ++ G ++ E+ +I+A + D + V++
Sbjct: 451 KKSGYV-PERDTYVSLISSYSRCGLFDQSMEIYKRMIEA-----GIYPDISTYNAVLSAL 504
Query: 499 ISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQ--- 555
G +QA L EM R Y+SLL AY A + ++ AL D + I+
Sbjct: 505 ARGGRWEQAEKLFAEMENLDCRPDELSYSSLLHAYANAKKLDKMKALSEDIYAEKIESHH 564
Query: 556 --------------------------------LDASCYEALL----QSKIVQKDTPGALH 579
LD + A++ ++++V+K
Sbjct: 565 GLVKTLVLVNSKVNNLSETEKAFLELGRRRCSLDINVLNAMVSVYGKNRMVKK----VEE 620
Query: 580 LFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKE-GQRIDCGVHDWNNVIH 638
+ MK S I S + L+ ++ + +L E+K G R D + +N +I+
Sbjct: 621 ILSLMKGSSINLS-TATYNSLMHMYSRLGDCEKCENILTEIKSSGARPD--RYSYNTMIY 677
Query: 639 FFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEMKSFASS 698
+ +K M++A + M+S G +P+ T++ V Y A + E +L M +
Sbjct: 678 AYGRKGQMKEASRLFSEMKSSGLIPDIVTYNIFVKSYVA-NSMFEEAIDLVRYMVTRGCK 736
Query: 699 TSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEE 733
+E +S+L + R G A A ++ + +
Sbjct: 737 P----NERTYNSILQEYCRHGKIADAKSFLSNLPQ 767
>gi|218188645|gb|EEC71072.1| hypothetical protein OsI_02831 [Oryza sativa Indica Group]
Length = 800
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 81/178 (45%), Gaps = 4/178 (2%)
Query: 499 ISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDA 558
I+ D+A+ LL EM GV + Y +L+ R EV +L+ + G A
Sbjct: 467 INKAAFDKAYALLAEMKQNGVSCNDYTYNTLINGLCVVGRVCEVGEMLKRFETEGFVPTA 526
Query: 559 SCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQ 618
Y +++ I A ++++M IP + + G + L K+L
Sbjct: 527 MTYNSIINGFIKAGMMGSAFAVYQQMCAKGIP-PNIVTYTSFIDGYCKTSCCDLALKMLN 585
Query: 619 EVK-EGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGY 675
+V+ +G R D + +N++I+ FC++ M A + L M G LPN ++S +TGY
Sbjct: 586 DVRCKGLRPD--IAAYNSLIYGFCQEGNMSHALQVLVLMLKDGLLPNISVYNSFITGY 641
Score = 48.1 bits (113), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 53/237 (22%), Positives = 93/237 (39%), Gaps = 13/237 (5%)
Query: 447 LQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQ 506
L PT+ Y L++ E G ++ + L S ++ VI ++
Sbjct: 313 LVPTDVTYTVLIRGCTEEGMPEKAYELCRQMRDHGLLPSTNE--FNMVIKGLLNDKLWKD 370
Query: 507 AHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQ 566
A L EM +G+ + Y L+ + + RE L G++ Y +LL
Sbjct: 371 AVSLFKEMADSGI-PDAFTYNILIHWLCQRRKIREALNLWEKMNETGVKPYIVTYHSLLL 429
Query: 567 SKIVQKDTPGALHLFKEMKESKIPRSGHQE----FEMLVKGCAQNHEAGLMAKLLQEVKE 622
V A+ L+ EM P G + L+KG LL E+K+
Sbjct: 430 CYCVNGCMDEAVKLYTEM-----PGKGFTPNVVTYTTLMKGHINKAAFDKAYALLAEMKQ 484
Query: 623 GQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIG 679
+ C + +N +I+ C + + + LKR + G +P A T++S++ G+ G
Sbjct: 485 NG-VSCNDYTYNTLINGLCVVGRVCEVGEMLKRFETEGFVPTAMTYNSIINGFIKAG 540
Score = 45.8 bits (107), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 57/275 (20%), Positives = 99/275 (36%), Gaps = 42/275 (15%)
Query: 454 YIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQAHDLLDE 513
Y L+ G+ E+ L + E E + +I I G + A + +
Sbjct: 494 YNTLINGLCVVGRVCEVGEMLKRFETEGFVPTA--MTYNSIINGFIKAGMMGSAFAVYQQ 551
Query: 514 MHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQKD 573
M G+ + Y S + Y + + +L D R G++ D + Y +L+ + +
Sbjct: 552 MCAKGIPPNIVTYTSFIDGYCKTSCCDLALKMLNDVRCKGLRPDIAAYNSLIYGFCQEGN 611
Query: 574 TPGALHLFKEM-KESKIPR--------SGHQEFEM------------------------- 599
AL + M K+ +P +G++ +M
Sbjct: 612 MSHALQVLVLMLKDGLLPNISVYNSFITGYKNLKMMEEALRFYEKMIKEGIDLDTATYTT 671
Query: 600 LVKGCAQNHEAGLMAKLLQE-VKEGQRIDCGVH-DWNNVIHFFCKKRLMQDAEKALKRMR 657
L+ G +++ KL E V +G D H + + H C+ + DA K L M
Sbjct: 672 LIDGFSKDGNVTFALKLYSEMVAKGNIPD---HITFTALTHGLCRNGDIDDARKLLDEMN 728
Query: 658 SLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEM 692
L PN ++ ++ GY GK E L EM
Sbjct: 729 RLDIRPNVLMYNMLINGYLR-NGKLQEAFRLHDEM 762
>gi|255556466|ref|XP_002519267.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223541582|gb|EEF43131.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 665
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 98/480 (20%), Positives = 181/480 (37%), Gaps = 45/480 (9%)
Query: 272 AEQLLDIMPRIGVKADSNLLIIMAHIYERNGRREELRKLQRHIDEAVNLSDIQFRQFYNC 331
+ LL M G+ +L I + + Y R G E+ K+ I E ++ YN
Sbjct: 98 VQYLLQQMKLEGISCSEDLFINVINTYRRVGLAEQALKMFYRIREFGCQPTVKI---YNH 154
Query: 332 LLSCHLKFGDLNSASKMVLEMLQRAKEARNSLAAAMLPFNAVGVNNRTPSEQNVNCTNSV 391
LL L + M + KE +L A+ NNR C V
Sbjct: 155 LLDAMLSENRFQMIEPIYSNMKRDGKEPNVYTYNILL--KALCKNNRVDGA----CKLLV 208
Query: 392 DLENSGIIENHILSYEDFTKDRKFVALEAEVKRVLQTLLGMLQKQVELITTEHGILQPTE 451
++ N G E ++SY + LG +++ EL QP
Sbjct: 209 EMSNKGC-EPDVVSYTTVISS--------------MSKLGKVEEARELSIR----FQPNV 249
Query: 452 KIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQAHDLL 511
+Y L+ F K KE+ FL+ + + + VI+ +G ++ A +
Sbjct: 250 SVYNALINGFCREYKVKEV--FLLLGQMVEKGIDPNVITYSTVISSLSGIGNVELALAVW 307
Query: 512 DEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQ 571
+M + G + + SL+K Y R E + G + + Y L+
Sbjct: 308 AKMFVRGCSPNVYTFTSLMKGYFMRGRVLEALNIWNRMAEEGFEPNVVAYNTLIHGLCSH 367
Query: 572 KDTPGALHLFKEMKESKIPRSGHQ----EFEMLVKGCAQNHEAGLMAKLLQEVKEGQRID 627
A+ + SK+ R+G + L+ G A+ + +++ ++ I
Sbjct: 368 GKMGEAVSV-----SSKMERNGCSPNVSTYGALIDGFAKAGDLVGASEIWNKMMTNGCIP 422
Query: 628 CGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTE 687
V + ++++ C+ + A +++M + PN TF++ + G G+
Sbjct: 423 -NVVVYTSMVNVLCRSSMFSQAWSLIEKMSTDNCPPNTVTFNTFIKGLCC-SGRVECAIN 480
Query: 688 LWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFIDKYKYRTLF 747
L+ +M+ + S ++ E+LD +L + A E+V MEE M ++ Y T+F
Sbjct: 481 LFCQMEQYGCSPNIKTYNEVLDGLL----KENRIKEALELVTEMEEKGMELNLVTYNTIF 536
>gi|255539196|ref|XP_002510663.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223551364|gb|EEF52850.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 695
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 65/308 (21%), Positives = 122/308 (39%), Gaps = 17/308 (5%)
Query: 447 LQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQ 506
L P I ++ A ++G+ E + + L+ A ++ + G L
Sbjct: 287 LSPRTATLIAVISALGDSGRIIEAEAIFEEMKDNGLKPK--TRAYNGLLKGYVKAGMLKD 344
Query: 507 AHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQ 566
A ++ EM +GV Y+ L+ AY A R +L++ + I ++ + +L
Sbjct: 345 AEFIVSEMERSGVSPDECTYSLLIDAYSNAGRWESARIVLKEMEANNIMPNSYVFSRILA 404
Query: 567 SKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLV----KGCAQNHEAGLMAKLLQEVKE 622
S + + + + KEMK S + R + +++ K +H K+L E +
Sbjct: 405 SYRDRGEWQKSFQVLKEMKNSGV-RPDRHFYNVMIDTFGKFSCLDHAMDTFDKMLSEGIQ 463
Query: 623 GQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKY 682
+ WN +I CK L + AE+ + M G P TF+ M+ + ++
Sbjct: 464 PDTVT-----WNTLIDCHCKAELHERAEELFEEMMEKGFSPCVTTFNIMINSFGE-QERW 517
Query: 683 TEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFIDKYK 742
+V L G M+S ++ L+D + + G F+ A E + M+ +
Sbjct: 518 DDVKTLMGNMRSLGLLPNVVTYTTLID----IYGKSGRFSDAIECLEDMKSAGLKPSSTM 573
Query: 743 YRTLFLKY 750
Y L Y
Sbjct: 574 YNALINAY 581
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 79/381 (20%), Positives = 152/381 (39%), Gaps = 60/381 (15%)
Query: 447 LQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQ 506
L+P + Y L+K +++AG K+ F++ +E E VS D+ +I + G +
Sbjct: 322 LKPKTRAYNGLLKGYVKAGMLKD-AEFIV-SEMERSGVSPDECTYSLLIDAYSNAGRWES 379
Query: 507 AHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQ 566
A +L EM + +S V++ +L +Y + ++ +L++ +++G++ D Y ++
Sbjct: 380 ARIVLKEMEANNIMPNSYVFSRILASYRDRGEWQKSFQVLKEMKNSGVRPDRHFYNVMID 439
Query: 567 -------------------SKIVQKDT-----------PGALH-----LFKEMKESKIPR 591
S+ +Q DT LH LF+EM E
Sbjct: 440 TFGKFSCLDHAMDTFDKMLSEGIQPDTVTWNTLIDCHCKAELHERAEELFEEMMEKGF-S 498
Query: 592 SGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEK 651
F +++ + + L+ ++ + V + +I + K DA +
Sbjct: 499 PCVTTFNIMINSFGEQERWDDVKTLMGNMRSLGLLP-NVVTYTTLIDIYGKSGRFSDAIE 557
Query: 652 ALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEMKSFASSTSMNFDEELLDSV 711
L+ M+S G P++ +++++ YA G V + S+ L+S+
Sbjct: 558 CLEDMKSAGLKPSSTMYNALINAYAQKGLSEQAVNAF-----RLMRADSLKPSLLALNSL 612
Query: 712 LYTFVRGGFFARANEVVAMMEEGKMFIDKYKYRTL---------FLK----YHKTLYKGK 758
+ F A A V+ M+E + D Y TL F K Y + + G
Sbjct: 613 INAFGEDRRDAEAFSVLKYMKENDLKPDVVTYTTLMKALIRVDKFNKVPSVYEEMILAGC 672
Query: 759 TPKFQTEAQLKKREAALGFKK 779
TP + A L+ +AL + K
Sbjct: 673 TPDRKARAMLR---SALKYMK 690
>gi|326505340|dbj|BAK03057.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326511084|dbj|BAJ91889.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326518326|dbj|BAJ88192.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326518558|dbj|BAJ88308.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 556
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 69/320 (21%), Positives = 125/320 (39%), Gaps = 23/320 (7%)
Query: 431 GMLQKQVELITTEHGILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAA 490
G L++ + L+ + G+ L+K +G+T E L E + + S++
Sbjct: 70 GDLEEAIRLVESMAGLEPSAAGPCAALIKKLCASGRTAEARRVLASCEPDVM--SYNAMV 127
Query: 491 LGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDAR 550
G+ +T G LD A L+ M + + Y +L++ R A+L D
Sbjct: 128 AGYCVT-----GQLDNARRLVAAMPM---EPDTYTYNTLIRGLCGRGRTDNALAVLDDML 179
Query: 551 SAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEA 610
G D Y LL++ + A+ L EM++ K + ++V G Q
Sbjct: 180 RRGCVPDVVTYTILLEATCKRSGYKQAVKLLDEMRD-KGCAPDIVTYNVVVNGICQE--- 235
Query: 611 GLMAKLLQEVKEGQRIDC--GVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTF 668
G + ++ +K C +N V+ C +DAEK + M G PN TF
Sbjct: 236 GRVDDAMEFLKSLPSYGCEPNTVSYNIVLKGLCTAERWEDAEKLMAEMSRKGRPPNVVTF 295
Query: 669 HSMVTGYAAIGGKYTEVTELWGEMKSFASS-TSMNFDEELLDSVLYTFVRGGFFARANEV 727
+ M+ + G E+ ++ + + S+++ + +L+ F + RA
Sbjct: 296 N-MLISFLCRRGLVEPAMEILDQIPKYGCTPNSLSY-----NPILHAFCKQKKMDRAMAF 349
Query: 728 VAMMEEGKMFIDKYKYRTLF 747
V +M + D Y TL
Sbjct: 350 VELMVSSGCYPDIVSYNTLL 369
Score = 47.4 bits (111), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 54/252 (21%), Positives = 100/252 (39%), Gaps = 15/252 (5%)
Query: 447 LQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITL---CISLGW 503
++P Y L++ G+T L + L+ + + I L C G+
Sbjct: 148 MEPDTYTYNTLIRGLCGRGRTDNALAVL----DDMLRRGCVPDVVTYTILLEATCKRSGY 203
Query: 504 LDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEA 563
QA LLDEM G Y ++ + R + L+ S G + + Y
Sbjct: 204 -KQAVKLLDEMRDKGCAPDIVTYNVVVNGICQEGRVDDAMEFLKSLPSYGCEPNTVSYNI 262
Query: 564 LLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEG 623
+L+ + A L EM P F ML+ + GL+ ++ + +
Sbjct: 263 VLKGLCTAERWEDAEKLMAEMSRKGRP-PNVVTFNMLISFLCRR---GLVEPAMEILDQI 318
Query: 624 QRIDCGVHD--WNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGK 681
+ C + +N ++H FCK++ M A ++ M S G P+ ++++++T GG+
Sbjct: 319 PKYGCTPNSLSYNPILHAFCKQKKMDRAMAFVELMVSSGCYPDIVSYNTLLTALCR-GGE 377
Query: 682 YTEVTELWGEMK 693
EL ++K
Sbjct: 378 VDAAVELLHQLK 389
Score = 44.7 bits (104), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 55/249 (22%), Positives = 100/249 (40%), Gaps = 37/249 (14%)
Query: 502 GWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCY 561
G ++ A ++LD++ G +S Y +L A+ + + A + S+G D Y
Sbjct: 306 GLVEPAMEILDQIPKYGCTPNSLSYNPILHAFCKQKKMDRAMAFVELMVSSGCYPDIVSY 365
Query: 562 EALLQSKIVQKDTPGALHLFKEMKE--------------SKIPRSGHQE------FEMLV 601
LL + + A+ L ++K+ + ++G E EM+
Sbjct: 366 NTLLTALCRGGEVDAAVELLHQLKDKGCTPVLISYNTVIDGLTKAGKTEEALELLNEMVT 425
Query: 602 KGCAQN--HEAGLMAKLLQE--VKEGQRIDCGVHD---------WNNVIHFFCKKRLMQD 648
KG + + + + L +E ++E + C V D +N ++ CK+R
Sbjct: 426 KGLQPDIITYSTISSGLCREGRIEEAIKAFCKVQDMGIRPNTVLYNAILLGLCKRRATHS 485
Query: 649 AEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEM--KSFASSTSMNFDE- 705
A M S G +PN T+ ++ G A G E E+ E+ + S T +N
Sbjct: 486 AIDLFTYMVSNGCMPNESTYTILIEGL-AYEGLVKEAREMMAELCSRGVVSKTLVNKGAI 544
Query: 706 ELLDSVLYT 714
LLD ++T
Sbjct: 545 RLLDGTMHT 553
>gi|115472657|ref|NP_001059927.1| Os07g0548300 [Oryza sativa Japonica Group]
gi|28564790|dbj|BAC57720.1| putative crp1 protein [Oryza sativa Japonica Group]
gi|113611463|dbj|BAF21841.1| Os07g0548300 [Oryza sativa Japonica Group]
Length = 661
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 55/250 (22%), Positives = 108/250 (43%), Gaps = 5/250 (2%)
Query: 445 GILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWL 504
G ++P + Y L+K +++ G K L E V+ D+A ++ G
Sbjct: 286 GEIKPRTRAYNALLKGYVKIGSLKNAEQVL--DEMSQCGVAPDEATYSLLVDAYTRAGRW 343
Query: 505 DQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEAL 564
+ A LL EM GV+ SS V++ +L + + ++ A+LR+ ++G++ D Y +
Sbjct: 344 ESARILLKEMEADGVKPSSYVFSRILAGFRDRGEWQKAFAVLREMHASGVRPDRHFYNVM 403
Query: 565 LQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQ 624
+ + A+ F M+E I + L+ + +L E++E
Sbjct: 404 IDTFGKYNCLGHAMDAFDRMREEGI-EPDVVTWNTLIDAHCKGGRHDRAIELFDEMRESN 462
Query: 625 RIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTE 684
G +N +I+ +++ + E L M+ G +PN T+ ++V Y G++ E
Sbjct: 463 -CPLGTTTYNIMINLLGEEQRWEGVEAMLAEMKEQGLVPNIITYTTLVDVYGR-SGRFKE 520
Query: 685 VTELWGEMKS 694
+ MK+
Sbjct: 521 AVDCIEAMKA 530
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 91/390 (23%), Positives = 154/390 (39%), Gaps = 51/390 (13%)
Query: 249 MKPNTNTFNIALAGCLLFETTRKAEQLLDIMPRIGVKADSNLLIIMAHIYERNGRREELR 308
+KP T +N L G + + + AEQ+LD M + GV D ++ Y R GR E R
Sbjct: 288 IKPRTRAYNALLKGYVKIGSLKNAEQVLDEMSQCGVAPDEATYSLLVDAYTRAGRWESAR 347
Query: 309 KLQRHID-EAVNLSDIQFRQFYNCLLSCHLKFGDLNSASKMVLEMLQRAKEAR------- 360
L + ++ + V S F + +L+ G+ A ++ EM A R
Sbjct: 348 ILLKEMEADGVKPSSYVFSR----ILAGFRDRGEWQKAFAVLREM--HASGVRPDRHFYN 401
Query: 361 ---------NSLAAAMLPFNAVGVNNRTPSEQNVNCTNSVDLENSGIIENHILSYEDFTK 411
N L AM F+ + P V +D G H + E F +
Sbjct: 402 VMIDTFGKYNCLGHAMDAFDRMREEGIEP--DVVTWNTLIDAHCKG--GRHDRAIELFDE 457
Query: 412 DRKF-VALEAEVKRVLQTLLGMLQK----QVELITTEHGILQPTEKIYIKLVKAFLEAGK 466
R+ L ++ LLG Q+ + L + L P Y LV + +G+
Sbjct: 458 MRESNCPLGTTTYNIMINLLGEEQRWEGVEAMLAEMKEQGLVPNIITYTTLVDVYGRSGR 517
Query: 467 TKELTHFLIKAEKENLQVSHDDAALGH-VITLCISLGWLDQAHDLLDEMHLAGVRASSSV 525
KE + + + L+ S + H ++ G D A +++ M G+ AS+ V
Sbjct: 518 FKEAVDCIEAMKADGLKPS---PTMYHALVNAYAQRGLADHALNVVKAMRADGLEASTVV 574
Query: 526 YASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMK 585
SL+ A+ E R E ++L+ + G++ D Y L+++ L + +
Sbjct: 575 LNSLINAFGEDRRIAEAFSVLQFMKENGLRPDVITYTTLMKA------------LIRVEQ 622
Query: 586 ESKIPRSGHQEFEMLVKGCAQNHEAGLMAK 615
K+P EM+ GCA + +A M +
Sbjct: 623 FEKVPVIYE---EMITSGCAPDRKARAMLR 649
>gi|302784232|ref|XP_002973888.1| hypothetical protein SELMODRAFT_100264 [Selaginella moellendorffii]
gi|300158220|gb|EFJ24843.1| hypothetical protein SELMODRAFT_100264 [Selaginella moellendorffii]
Length = 399
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 60/255 (23%), Positives = 106/255 (41%), Gaps = 11/255 (4%)
Query: 429 LLGMLQKQVELI--TTEHGILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSH 486
L G LQ ++L+ + + PT +Y V A ++GK E ++K K+
Sbjct: 30 LAGELQAAMDLLREMEQQPGMAPTPSMYNFFVHALCKSGKVPEAME-VVKNMKDG-ACKP 87
Query: 487 DDAALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALL 546
D +I G LD+A +LDEM +G A+ Y +L+ A R E ++
Sbjct: 88 DVVTFNTLIAGLCKAGRLDEAQQVLDEMERSGFAANLVTYNTLINGLSSAGRSGEAVLVM 147
Query: 547 RDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQ 606
+ + D Y A++ + A +EMK+ + +L+ G +
Sbjct: 148 QGMTTTP---DTQTYNAIIHGFCKSGEIDRAYGFLEEMKQRAGCSPDTFTYSILINGLCK 204
Query: 607 NHEAGLMAKLLQEVKEGQRIDC--GVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPN 664
+ +LLQE+ R DC V +N ++ +CK + + A + L M G P+
Sbjct: 205 SSNLRKADELLQEMI--GRKDCCASVVAFNTLVDGYCKAQDLDRARELLSSMLEHGCAPD 262
Query: 665 AQTFHSMVTGYAAIG 679
T+ +++ G G
Sbjct: 263 VVTYSTIIDGLCRCG 277
>gi|125600636|gb|EAZ40212.1| hypothetical protein OsJ_24656 [Oryza sativa Japonica Group]
Length = 661
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 55/250 (22%), Positives = 108/250 (43%), Gaps = 5/250 (2%)
Query: 445 GILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWL 504
G ++P + Y L+K +++ G K L E V+ D+A ++ G
Sbjct: 286 GEIKPRTRAYNALLKGYVKIGSLKNAEQVL--DEMSQCGVAPDEATYSLLVDAYTRAGRW 343
Query: 505 DQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEAL 564
+ A LL EM GV+ SS V++ +L + + ++ A+LR+ ++G++ D Y +
Sbjct: 344 ESARILLKEMEADGVKPSSYVFSRILAGFRDRGEWQKAFAVLREMHASGVRPDRHFYNVM 403
Query: 565 LQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQ 624
+ + A+ F M+E I + L+ + +L E++E
Sbjct: 404 IDTFGKYNCLGHAMDAFDRMREEGI-EPDVVTWNTLIDAHCKGGRHDRAIELFDEMRESN 462
Query: 625 RIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTE 684
G +N +I+ +++ + E L M+ G +PN T+ ++V Y G++ E
Sbjct: 463 -CPLGTTTYNIMINLLGEEQRWEGVEAMLAEMKEQGLVPNIITYTTLVDVYGR-SGRFKE 520
Query: 685 VTELWGEMKS 694
+ MK+
Sbjct: 521 AVDCIEAMKA 530
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 91/390 (23%), Positives = 154/390 (39%), Gaps = 51/390 (13%)
Query: 249 MKPNTNTFNIALAGCLLFETTRKAEQLLDIMPRIGVKADSNLLIIMAHIYERNGRREELR 308
+KP T +N L G + + + AEQ+LD M + GV D ++ Y R GR E R
Sbjct: 288 IKPRTRAYNALLKGYVKIGSLKNAEQVLDEMSQCGVAPDEATYSLLVDAYTRAGRWESAR 347
Query: 309 KLQRHID-EAVNLSDIQFRQFYNCLLSCHLKFGDLNSASKMVLEMLQRAKEAR------- 360
L + ++ + V S F + +L+ G+ A ++ EM A R
Sbjct: 348 ILLKEMEADGVKPSSYVFSR----ILAGFRDRGEWQKAFAVLREM--HASGVRPDRHFYN 401
Query: 361 ---------NSLAAAMLPFNAVGVNNRTPSEQNVNCTNSVDLENSGIIENHILSYEDFTK 411
N L AM F+ + P V +D G H + E F +
Sbjct: 402 VMIDTFGKYNCLGHAMDAFDRMREEGIEP--DVVTWNTLIDAHCKG--GRHDRAIELFDE 457
Query: 412 DRKF-VALEAEVKRVLQTLLGMLQK----QVELITTEHGILQPTEKIYIKLVKAFLEAGK 466
R+ L ++ LLG Q+ + L + L P Y LV + +G+
Sbjct: 458 MRESNCPLGTTTYNIMINLLGEEQRWEGVEAMLAEMKEQGLVPNIITYTTLVDVYGRSGR 517
Query: 467 TKELTHFLIKAEKENLQVSHDDAALGH-VITLCISLGWLDQAHDLLDEMHLAGVRASSSV 525
KE + + + L+ S + H ++ G D A +++ M G+ AS+ V
Sbjct: 518 FKEAVDCIEAMKADGLKPS---PTMYHALVNAYAQRGLADHALNVVKAMRADGLEASTVV 574
Query: 526 YASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMK 585
SL+ A+ E R E ++L+ + G++ D Y L+++ L + +
Sbjct: 575 LNSLINAFGEDRRIAEAFSVLQFMKENGLRPDVITYTTLMKA------------LIRVEQ 622
Query: 586 ESKIPRSGHQEFEMLVKGCAQNHEAGLMAK 615
K+P EM+ GCA + +A M +
Sbjct: 623 FEKVPVIYE---EMITSGCAPDRKARAMLR 649
>gi|302771513|ref|XP_002969175.1| hypothetical protein SELMODRAFT_90172 [Selaginella moellendorffii]
gi|300163680|gb|EFJ30291.1| hypothetical protein SELMODRAFT_90172 [Selaginella moellendorffii]
Length = 399
Score = 63.2 bits (152), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 60/255 (23%), Positives = 106/255 (41%), Gaps = 11/255 (4%)
Query: 429 LLGMLQKQVELI--TTEHGILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSH 486
L G LQ ++L+ + + PT +Y V A ++GK E ++K K+
Sbjct: 30 LAGELQAAMDLLREMEQQPGMAPTPSMYNFFVHALCKSGKVPEAME-VVKNMKDG-ACKP 87
Query: 487 DDAALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALL 546
D +I G LD+A +LDEM +G A+ Y +L+ A R E ++
Sbjct: 88 DVVTFNTLIAGLCKAGRLDEAQQVLDEMERSGFAANLVTYNTLINGLSSAGRSGEAVLVM 147
Query: 547 RDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQ 606
+ + D Y A++ + A +EMK+ + +L+ G +
Sbjct: 148 QGMTTTP---DTQTYNAIIHGFCKSGEIDRAYGFLEEMKQRAGCSPDTFTYSILINGLCK 204
Query: 607 NHEAGLMAKLLQEVKEGQRIDC--GVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPN 664
+ +LLQE+ R DC V +N ++ +CK + + A + L M G P+
Sbjct: 205 SSNLRKADELLQEMI--GRKDCCASVVAFNTLVDGYCKAQDLDRARELLSSMLEHGCAPD 262
Query: 665 AQTFHSMVTGYAAIG 679
T+ +++ G G
Sbjct: 263 VVTYSTIIDGLCRCG 277
>gi|6633829|gb|AAF19688.1|AC009519_22 F1N19.15 [Arabidopsis thaliana]
Length = 1048
Score = 63.2 bits (152), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 81/178 (45%), Gaps = 2/178 (1%)
Query: 502 GWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCY 561
G L+ A +LL+EM G+ A Y +LL + R + +LRD I D +
Sbjct: 190 GELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTF 249
Query: 562 EALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVK 621
AL+ + Q + A L+KEM +S + + + ++ G H AK ++
Sbjct: 250 TALIDVFVKQGNLDEAQELYKEMIQSSVD-PNNVTYNSIINGLCM-HGRLYDAKKTFDLM 307
Query: 622 EGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIG 679
+ V +N +I FCK R++ + K +RM G + T+++++ GY +G
Sbjct: 308 ASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVG 365
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 90/200 (45%), Gaps = 2/200 (1%)
Query: 480 ENLQVSHDDAALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRP 539
ENL +SHD + +I L A LL +M G R S SLL + + NR
Sbjct: 631 ENLGISHDLYSFTILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRF 690
Query: 540 REVTALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEM 599
+E +L+ G + Y ++ +D AL +F M++ I R+ +
Sbjct: 691 QEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGI-RADAVTYNT 749
Query: 600 LVKGCAQNHEAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSL 659
L+ G + + A+LL+++ + ++ID V + +I F K+ + +A K M
Sbjct: 750 LISGLSNSGRWTDAARLLRDMVK-RKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRR 808
Query: 660 GHLPNAQTFHSMVTGYAAIG 679
+PN T++S++ G+ G
Sbjct: 809 SVVPNVFTYNSLINGFCIHG 828
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 59/247 (23%), Positives = 109/247 (44%), Gaps = 15/247 (6%)
Query: 504 LDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEA 563
L+ A ++ M G+RA + Y +L+ + R + LLRD I + + A
Sbjct: 725 LNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTA 784
Query: 564 LLQSKIVQKDTPGALHLFKEM-KESKIPRSGHQEFEMLVKG-CAQN--HEAGLMAKLLQE 619
L+ + + + + A +L+KEM + S +P + L+ G C +A M L+
Sbjct: 785 LIDTFVKEGNLLEARNLYKEMIRRSVVPNV--FTYNSLINGFCIHGCLGDAKYMFDLM-- 840
Query: 620 VKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIG 679
V +G D V +N +I FCK + ++D K M G + +A T+++++ GY
Sbjct: 841 VSKGCFPD--VVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQ-A 897
Query: 680 GKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFID 739
GK +++ M S + LLD + G +A +V +++ +M +D
Sbjct: 898 GKLNVAQKVFNRMVDCGVSPDIVTYNILLDCL----CNNGKIEKALVMVEDLQKSEMDVD 953
Query: 740 KYKYRTL 746
Y +
Sbjct: 954 IITYNII 960
Score = 45.8 bits (107), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 56/266 (21%), Positives = 103/266 (38%), Gaps = 11/266 (4%)
Query: 447 LQPTEKIYIKLVKAFLEAG---KTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGW 503
+ P + L+ F++ G + +EL +I++ + V+++ G LC+ G
Sbjct: 242 INPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIING----LCMH-GR 296
Query: 504 LDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEA 563
L A D M G + Y +L+ + + E L + G D Y
Sbjct: 297 LYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNT 356
Query: 564 LLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEG 623
L+ AL +F M ++ +L C + K +++E
Sbjct: 357 LIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKF-DDMRES 415
Query: 624 QRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYT 683
++ G+ +N +IH CK ++ A + R+ G P+A+T+ M+ G G
Sbjct: 416 EKY-IGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCK-NGPRR 473
Query: 684 EVTELWGEMKSFASSTSMNFDEELLD 709
E EL MK MN +++ L+
Sbjct: 474 EADELIRRMKEEGIICQMNAEDDHLE 499
Score = 44.7 bits (104), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 133/665 (20%), Positives = 258/665 (38%), Gaps = 91/665 (13%)
Query: 104 HRYGDAWKLYEQHMQMDGFPRKTLVNKILTSFVESLDSKWLEKAYGLVEQAFEEGKQILL 163
+R GDA+ L ++ P + N ++ ++ + L A L+ + ++G L
Sbjct: 155 NRIGDAFSLVILMVKSGYEPNVVVYNTLIDGLCKNGE---LNIALELLNEMEKKG----L 207
Query: 164 EKEPLIYLSL--GLSKCGLPVPASTILRKLVATEQYPPVTAWSAILAHMSLTAPGAYLAA 221
+ + Y +L GL G A+ +LR ++ P V ++A+
Sbjct: 208 GADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTAL--------------- 252
Query: 222 ELILEIGYLFQDGRVDPRKKCNAPLI--AMKPNTNTFNIALAGCLLFETTRKAEQLLDIM 279
I + G +D ++ +I ++ PN T+N + G + A++ D+M
Sbjct: 253 -----IDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLM 307
Query: 280 PRIGVKADS---NLLIIMAHIYERNGRREELRKLQRHIDEAVNLSDIQFRQFYNCLLSCH 336
G + N LI + + E ++ QR E N +DI YN L+ +
Sbjct: 308 ASKGCFPNVVTYNTLI--SGFCKFRMVDEGMKLFQRMSCEGFN-ADIFT---YNTLIHGY 361
Query: 337 LKFGDLNSASKMVLEMLQRAKEARNSLAAAMLPFNAVGVNNRTPSEQNVNCTNSVDLENS 396
+ G L A + M+ R R + +C L +
Sbjct: 362 CQVGKLRVALDIFCWMVSR----------------------RVTPDIITHCILLHGLCVN 399
Query: 397 GIIENHILSYEDFTKDRKFVALEAEVKRVLQTLL--GMLQKQVELIT--TEHGILQPTEK 452
G IE+ ++ ++D + K++ + A ++ L ++K EL G+ +P +
Sbjct: 400 GEIESALVKFDDMRESEKYIGIVA-YNIMIHGLCKADKVEKAWELFCRLPVEGV-KPDAR 457
Query: 453 IYIKLVKAFLEAGKTKELTHFLIKAEKENL--QVSHDDAAL------GHVITLCISLGWL 504
Y ++ + G +E + + ++E + Q++ +D L I+L + W
Sbjct: 458 TYTIMILGLCKNGPRREADELIRRMKEEGIICQMNAEDDHLEEHSSSNKEISLSLREIWE 517
Query: 505 DQAHDLLDEMHLAGVRASSSVYASLLKAYI---EANRPREVTALLRDARSAGIQLDASCY 561
+ L + SSSV + + Y+ N P T+L R A Y
Sbjct: 518 RSKSNPFWMQRLIPIAFSSSVKGFVRRHYLLLERGNNPE--TSLSRSFSGASHHHH---Y 572
Query: 562 EALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVK 621
L++++ A LF EM +S+ P +F ++ A+ ++ ++ L ++
Sbjct: 573 RERLRNELHCIKFDDAFSLFCEMLQSR-PIPSIVDFTRVLTVIAKMNKFDIVIYLYHKM- 630
Query: 622 EGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGK 681
E I ++ + +IH FC+ + A L +M LG P+ T S++ G+ G +
Sbjct: 631 ENLGISHDLYSFTILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQ-GNR 689
Query: 682 YTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFIDKY 741
+ E L M F ++ + ++V+ + A EV ME+ + D
Sbjct: 690 FQEAVSLVDSMDGFGFVPNV----VIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAV 745
Query: 742 KYRTL 746
Y TL
Sbjct: 746 TYNTL 750
Score = 44.3 bits (103), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 74/374 (19%), Positives = 143/374 (38%), Gaps = 56/374 (14%)
Query: 448 QPTEKI--YIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLD 505
QP I + +L+ A + + + +F K E +SHD + +I L
Sbjct: 66 QPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYG--ISHDLYSFTILIHCFCRCSRLS 123
Query: 506 QAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALL 565
A +L +M G S + SLL + NR + +L+ +G + + Y L+
Sbjct: 124 FALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYNTLI 183
Query: 566 QSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQE------ 619
+ AL L EM E K + + L+ G + A++L++
Sbjct: 184 DGLCKNGELNIALELLNEM-EKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSI 242
Query: 620 --------------VKEGQ--------------RIDCGVHDWNNVIHFFCKKRLMQDAEK 651
VK+G +D +N++I+ C + DA+K
Sbjct: 243 NPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKK 302
Query: 652 ALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEMKSFASSTSMNFDEELL--D 709
M S G PN T++++++G+ K+ V E MK F + F+ ++ +
Sbjct: 303 TFDLMASKGCFPNVVTYNTLISGFC----KFRMVDE---GMKLFQRMSCEGFNADIFTYN 355
Query: 710 SVLYTFVRGGFFARANEVVAMMEEGKMFIDKYKYRTLFLKYHKTLYKGKTPKFQTEAQLK 769
++++ + + G A ++ M ++ D + H L G + E+ L
Sbjct: 356 TLIHGYCQVGKLRVALDIFCWMVSRRVTPD--------IITHCILLHGLCVNGEIESALV 407
Query: 770 KREAALGFKKWLGL 783
K + +K++G+
Sbjct: 408 KFDDMRESEKYIGI 421
>gi|449461475|ref|XP_004148467.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
mitochondrial-like [Cucumis sativus]
Length = 775
Score = 63.2 bits (152), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 95/212 (44%), Gaps = 5/212 (2%)
Query: 502 GWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCY 561
G ++ A + M A + + + ++K +A R E L S G Y
Sbjct: 451 GDIENAFSIFHRMKDANILPTDTTLGIIIKGLCKAGRSFEGRDLFNKFVSQGFVPTCMPY 510
Query: 562 EALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVK 621
++ I + + A ++++EM E I S + L+ G + + L KLL ++K
Sbjct: 511 NTIIDGFIKEGNINLASNVYREMCEVGITPS-TVTYTSLIDGFCKGNNIDLALKLLNDMK 569
Query: 622 -EGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGG 680
+G ++D + + +I FCK+R M+ A + L +R G PN ++SM+TG+ +
Sbjct: 570 RKGLKMD--IKAYGTLIDGFCKRRDMKSAHELLNELRGAGLSPNRFIYNSMITGFKNM-N 626
Query: 681 KYTEVTELWGEMKSFASSTSMNFDEELLDSVL 712
E +L+ +M + + L+D +L
Sbjct: 627 NVEEAIDLYKKMVNEGIPCDLKTYTSLIDGLL 658
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 86/221 (38%), Gaps = 34/221 (15%)
Query: 488 DAALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLR 547
+ VIT C+ G + +A L D+M G + +V SL+K Y R L+
Sbjct: 228 EGTFTSVITACVKEGNVAEALRLKDDMVNCGKSMNLAVATSLMKGYCMQGNLRSALVLVN 287
Query: 548 DARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKG---C 604
+ +G+ + Y L+ + A + EMK I RS +++G C
Sbjct: 288 EISESGLVPNKVTYSVLIDGCCKNGNIEKAFEFYSEMKTKGI-RSSVYSLNSILEGYLKC 346
Query: 605 A--QNH--------EAG---------LMAKLLQEVKEGQR-----------IDCGVHDWN 634
QN E+G L++ L +E K + I V +N
Sbjct: 347 QSWQNAFTMFNDALESGLANVFTFNTLLSWLCKEGKMNEACNLWDEVIAKGISPNVVSYN 406
Query: 635 NVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGY 675
N+I C+K + A K K M G PNA TF ++ GY
Sbjct: 407 NIILGHCRKDNINAACKVYKEMLDNGFTPNAVTFTILMDGY 447
>gi|20219038|gb|AAM15782.1|AC104428_3 Putative indole-3-acetate beta-glucosyltransferase [Oryza sativa
Japonica Group]
gi|108706351|gb|ABF94146.1| Rf1 protein, mitochondrial precursor, putative [Oryza sativa
Japonica Group]
gi|125585039|gb|EAZ25703.1| hypothetical protein OsJ_09536 [Oryza sativa Japonica Group]
Length = 648
Score = 63.2 bits (152), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 62/255 (24%), Positives = 111/255 (43%), Gaps = 16/255 (6%)
Query: 497 LCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQL 556
LC S W D+A ++ EM GV + L+ + E + ++ R GI+
Sbjct: 236 LCRSGMW-DKAWEVFKEMDDFGVAPDVRSFTILIGGFCRVGEIEEALKIYKEMRHRGIKP 294
Query: 557 DASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKL 616
D + L+ + A+ +EM+ + G + M++ G + AGLM+
Sbjct: 295 DLVSFSCLIGLFARRGKMDHAMAYLREMRCFGLVPDG-VIYTMVIGGFCR---AGLMSDA 350
Query: 617 LQEVKEGQRIDCG----VHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMV 672
L+ E + CG V +N +++ CK+R + DAE L MR G P+ TF +++
Sbjct: 351 LRVRDE--MVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTTLI 408
Query: 673 TGYAAIGGKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMME 732
GY I GK + +L+ M + + D ++++ R G +AN++ M
Sbjct: 409 HGY-CIEGKLDKALQLFDTM----LNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMH 463
Query: 733 EGKMFIDKYKYRTLF 747
++F + Y L
Sbjct: 464 SREIFPNHVTYSILI 478
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 64/304 (21%), Positives = 117/304 (38%), Gaps = 9/304 (2%)
Query: 444 HGILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGW 503
H ++P + L+ F GK +L E + D VI G
Sbjct: 289 HRGIKPDLVSFSCLIGLFARRGKMDHAMAYL--REMRCFGLVPDGVIYTMVIGGFCRAGL 346
Query: 504 LDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEA 563
+ A + DEM G Y +LL + R + LL + R G+ D +
Sbjct: 347 MSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTT 406
Query: 564 LLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEG 623
L+ ++ AL LF M ++ R + L+ G + + L ++
Sbjct: 407 LIHGYCIEGKLDKALQLFDTMLNQRL-RPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSR 465
Query: 624 QRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYT 683
+ V ++ +I C+K ++DA L M + G LPN T++S++ GY G
Sbjct: 466 EIFPNHV-TYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSK 524
Query: 684 EVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFIDKYKY 743
L M + S + + +++++ +++ A +++ MME+ K+ D Y
Sbjct: 525 GQKFLQKMMVNKVSPDLITY-----NTLIHGYIKEDKMHDAFKLLNMMEKEKVQPDVVTY 579
Query: 744 RTLF 747
L
Sbjct: 580 NMLI 583
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 63/309 (20%), Positives = 117/309 (37%), Gaps = 15/309 (4%)
Query: 447 LQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQ 506
+ P + + L+ F G+ +E I E + + D + +I L G +D
Sbjct: 257 VAPDVRSFTILIGGFCRVGEIEEALK--IYKEMRHRGIKPDLVSFSCLIGLFARRGKMDH 314
Query: 507 AHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQ 566
A L EM G+ +Y ++ + A + + + G D Y LL
Sbjct: 315 AMAYLREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLN 374
Query: 567 SKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKG-CAQNHEAGLMAKLLQ--EVKEG 623
++ A L EM+E +P F L+ G C + G + K LQ +
Sbjct: 375 GLCKERRLLDAEGLLNEMRERGVP-PDLCTFTTLIHGYCIE----GKLDKALQLFDTMLN 429
Query: 624 QRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYT 683
QR+ + +N +I C++ + A M S PN T+ ++ + G
Sbjct: 430 QRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKG---- 485
Query: 684 EVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFIDKYKY 743
+V + +G + + + + +S++ + R G ++ + + M K+ D Y
Sbjct: 486 QVEDAFGFLDEMINKGILP-NIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITY 544
Query: 744 RTLFLKYHK 752
TL Y K
Sbjct: 545 NTLIHGYIK 553
Score = 48.5 bits (114), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 91/454 (20%), Positives = 176/454 (38%), Gaps = 36/454 (7%)
Query: 248 AMKPNTNTFNIALAGCLLFETTRKAEQLLDIMPRIGVKADSNLLIIMAHIYERNGRREEL 307
+KP T+N L G KA ++ M GV D I+ + R G EE
Sbjct: 221 GLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRSFTILIGGFCRVGEIEEA 280
Query: 308 RKLQRHIDEAVNLSDIQFRQFYNCLLSCHLKFGDLNSASKMVLEMLQRAKEARNSLAAAM 367
K+ + + D+ ++CL+ + G ++ A + EM + +
Sbjct: 281 LKIYKEMRHRGIKPDLVS---FSCLIGLFARRGKMDHAMAYLREMRCFGLVPDGVIYTMV 337
Query: 368 LP-FNAVGVNNRT--PSEQNVNCTNSVDLENSGIIENHILSYEDFTKDRKFVALEAEVKR 424
+ F G+ + ++ V C D+ + N + K+R+ L+AE
Sbjct: 338 IGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGL------CKERRL--LDAE--- 386
Query: 425 VLQTLLGMLQKQVELITTEHGILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQV 484
G+L + E G+ P + L+ + GK + + L+
Sbjct: 387 ------GLLNEM-----RERGV-PPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLR- 433
Query: 485 SHDDAALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTA 544
D +I G LD+A+DL D+MH + + Y+ L+ ++ E + +
Sbjct: 434 -PDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFG 492
Query: 545 LLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGC 604
L + + GI + Y ++++ + ++M +K+ + L+ G
Sbjct: 493 FLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVS-PDLITYNTLIHGY 551
Query: 605 AQNHEAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPN 664
+ + KLL + E +++ V +N +I+ F +Q+A ++M + G P+
Sbjct: 552 IKEDKMHDAFKLLN-MMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPD 610
Query: 665 AQTFHSMVTGYAAIGGKYTEVTELWGEM--KSFA 696
T+ SM+ G+ G E +L EM + FA
Sbjct: 611 RYTYMSMINGHVT-AGNSKEAFQLHDEMLQRGFA 643
>gi|125558723|gb|EAZ04259.1| hypothetical protein OsI_26403 [Oryza sativa Indica Group]
Length = 528
Score = 63.2 bits (152), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 55/250 (22%), Positives = 108/250 (43%), Gaps = 5/250 (2%)
Query: 445 GILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWL 504
G ++P + Y L+K +++ G K L E V+ D+A ++ G
Sbjct: 153 GEIKPRTRAYNALLKGYVKIGSLKNAEQVL--DEMSQCGVAPDEATYSLLVDAYTRAGRW 210
Query: 505 DQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEAL 564
+ A LL EM GV+ SS V++ +L + + ++ A+LR+ ++G++ D Y +
Sbjct: 211 ESARILLKEMEADGVKPSSYVFSRILAGFRDRGEWQKAFAVLREMHASGVRPDRHFYNVM 270
Query: 565 LQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQ 624
+ + A+ F M+E I + L+ + +L E++E
Sbjct: 271 IDTFGKYNCLGHAMDAFDRMREEGI-EPDVVTWNTLIDAHCKGGRHDRAIELFDEMRESN 329
Query: 625 RIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTE 684
G +N +I+ +++ + E L M+ G +PN T+ ++V Y G++ E
Sbjct: 330 -CPLGTTTYNIMINLLGEEQRWEGVEAMLAEMKEQGLVPNIITYTTLVDVYGR-SGRFKE 387
Query: 685 VTELWGEMKS 694
+ MK+
Sbjct: 388 AVDCIEAMKA 397
Score = 58.9 bits (141), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 93/391 (23%), Positives = 158/391 (40%), Gaps = 53/391 (13%)
Query: 249 MKPNTNTFNIALAGCLLFETTRKAEQLLDIMPRIGVKADSNLLIIMAHIYERNGRREELR 308
+KP T +N L G + + + AEQ+LD M + GV D ++ Y R GR E R
Sbjct: 155 IKPRTRAYNALLKGYVKIGSLKNAEQVLDEMSQCGVAPDEATYSLLVDAYTRAGRWESAR 214
Query: 309 KLQRHID-EAVNLSDIQFRQFYNCLLSCHLKFGDLNSASKMVLEMLQRAKEAR------- 360
L + ++ + V S F + +L+ G+ A ++ EM A R
Sbjct: 215 ILLKEMEADGVKPSSYVFSR----ILAGFRDRGEWQKAFAVLREM--HASGVRPDRHFYN 268
Query: 361 ---------NSLAAAMLPFNAVGVNNRTPSEQNVNCTNSVDLENSGIIENHILSYEDFTK 411
N L AM F+ + P V +D G H + E F +
Sbjct: 269 VMIDTFGKYNCLGHAMDAFDRMREEGIEP--DVVTWNTLIDAHCKG--GRHDRAIELFDE 324
Query: 412 DRKF-VALEAEVKRVLQTLLGMLQK--QVELITT---EHGILQPTEKIYIKLVKAFLEAG 465
R+ L ++ LLG Q+ VE + E G++ P Y LV + +G
Sbjct: 325 MRESNCPLGTTTYNIMINLLGEEQRWEGVEAMLAEMKEQGLV-PNIITYTTLVDVYGRSG 383
Query: 466 KTKELTHFLIKAEKENLQVSHDDAALGH-VITLCISLGWLDQAHDLLDEMHLAGVRASSS 524
+ KE + + + L+ S + + H ++ G D A +++ M G+ AS+
Sbjct: 384 RFKEAVDCIEAMKADGLKPS---STMYHALVNAYAQRGLADHALNVVKAMRADGLEASTV 440
Query: 525 VYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEM 584
V SL+ A+ E R E ++L+ + G++ D Y L+++ L +
Sbjct: 441 VLNSLINAFGEDRRIAEAFSVLQFMKENGLRPDVITYTTLMKA------------LIRVE 488
Query: 585 KESKIPRSGHQEFEMLVKGCAQNHEAGLMAK 615
+ K+P EM+ GCA + +A M +
Sbjct: 489 QFEKVPVIYE---EMITSGCAPDRKARAMLR 516
>gi|449454139|ref|XP_004144813.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09820-like [Cucumis sativus]
gi|449524964|ref|XP_004169491.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09820-like [Cucumis sativus]
Length = 611
Score = 63.2 bits (152), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 44/200 (22%), Positives = 94/200 (47%), Gaps = 5/200 (2%)
Query: 483 QVSHDDAALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREV 542
++S + VI +G L++A D++D+M + G + Y +L+ Y + R ++
Sbjct: 225 KISPNLITFNTVINGLCKVGKLNKAGDVVDDMKVWGFWPNVVTYNTLIDGYCKMGRVGKM 284
Query: 543 ---TALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEM 599
A+L++ + ++ + L+ ++ AL +F+EM+ + + +
Sbjct: 285 YKADAILKEMVENKVSPNSVTFNVLIDGFCKDENLSAALKVFEEMQSQGL-KPTVVTYNS 343
Query: 600 LVKGCAQNHEAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSL 659
LV G + AK+L + + V +N +I+ +CKK+L+++A + +
Sbjct: 344 LVNGLCNEGKLN-EAKVLLDEMLSSNLKPNVITYNALINGYCKKKLLEEARELFDNIGKQ 402
Query: 660 GHLPNAQTFHSMVTGYAAIG 679
G PN TF++++ GY G
Sbjct: 403 GLTPNVITFNTLLHGYCKFG 422
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 77/169 (45%), Gaps = 4/169 (2%)
Query: 501 LGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASC 560
G +++A L M G ++S Y L+ + + EV LL + + G++ D
Sbjct: 421 FGKMEEAFLLQKVMLEKGFLPNASTYNCLIVGFCREGKMEEVKNLLNEMQCRGVKADTVT 480
Query: 561 YEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKG-CAQNHEAGLMAKLLQE 619
Y L+ + +K+ A L EM + + + H + +L+ G C + + + Q
Sbjct: 481 YNILISAWCEKKEPKKAARLIDEMLDKGL-KPSHLTYNILLNGYCMEGNLRAALNLRKQM 539
Query: 620 VKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTF 668
KEG+ + V +N +I +C+K ++DA L M G +PN T+
Sbjct: 540 EKEGRWAN--VVTYNVLIQGYCRKGKLEDANGLLNEMLEKGLIPNRTTY 586
Score = 46.2 bits (108), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 53/253 (20%), Positives = 103/253 (40%), Gaps = 19/253 (7%)
Query: 447 LQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQ---VSHDDAALGHVITLCISLGW 503
L+PT Y LV GK E L + NL+ ++++ G+
Sbjct: 334 LKPTVVTYNSLVNGLCNEGKLNEAKVLLDEMLSSNLKPNVITYNALINGYC-----KKKL 388
Query: 504 LDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEA 563
L++A +L D + G+ + + +LL Y + + E L + G +AS Y
Sbjct: 389 LEEARELFDNIGKQGLTPNVITFNTLLHGYCKFGKMEEAFLLQKVMLEKGFLPNASTYNC 448
Query: 564 LLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEG 623
L+ + +L EM+ + ++ + +L+ + E A+L+ E+
Sbjct: 449 LIVGFCREGKMEEVKNLLNEMQCRGV-KADTVTYNILISAWCEKKEPKKAARLIDEM--- 504
Query: 624 QRIDCGVH----DWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIG 679
+D G+ +N +++ +C + ++ A K+M G N T++ ++ GY
Sbjct: 505 --LDKGLKPSHLTYNILLNGYCMEGNLRAALNLRKQMEKEGRWANVVTYNVLIQGYCR-K 561
Query: 680 GKYTEVTELWGEM 692
GK + L EM
Sbjct: 562 GKLEDANGLLNEM 574
>gi|449462136|ref|XP_004148797.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g48810-like [Cucumis sativus]
Length = 660
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 70/315 (22%), Positives = 123/315 (39%), Gaps = 41/315 (13%)
Query: 448 QPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENL-------------QVSHDDAALGH- 493
+PT +IY L+ A L K + + +K+ L +D H
Sbjct: 141 KPTVRIYNHLLDALLSENKFQMINPLYTNMKKDGLIPNVFTYNILLKALCKNDRVDAAHK 200
Query: 494 -------------VITLCISLGWLDQAHDLLDEMHLAG-VRASSSVYASLLKAYIEANRP 539
+T + L +A + D LAG + S VY +L+ + R
Sbjct: 201 LFVEMSNKGCPPDAVTYTTMVSSLCKAGKIDDARELAGRFKPSVPVYNALIDGMCKEGRI 260
Query: 540 REVTALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEM 599
LL + G+ + Y ++ S V + A LF +M + H F
Sbjct: 261 EVAIKLLGEMMDNGVDPNVVSYSCIINSLCVSGNVELAFALFAQMFLRGCDANIHT-FTP 319
Query: 600 LVKGC---AQNHEAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRM 656
L+KGC + +EA + KL+ +++G + V +N +IH C +++A + +M
Sbjct: 320 LIKGCFMRGKLYEALDLWKLM--IQDGCEPN--VVAYNTLIHGLCSNGSLEEALQVCDQM 375
Query: 657 RSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFV 716
+ G LPN T+ ++ G+A G +E W M S ++ ++D
Sbjct: 376 QRSGCLPNVTTYSILIDGFAK-SGDLVGASETWNRMISHGCRPNVVTYTCMVD----VLC 430
Query: 717 RGGFFARANEVVAMM 731
+ F +AN +V M
Sbjct: 431 KNSMFDQANSLVEKM 445
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 75/370 (20%), Positives = 138/370 (37%), Gaps = 50/370 (13%)
Query: 445 GILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVI-TLCISLGW 503
G +P+ +Y L+ + G+ + L E + V + + +I +LC+S G
Sbjct: 238 GRFKPSVPVYNALIDGMCKEGRIEVAIKLL--GEMMDNGVDPNVVSYSCIINSLCVS-GN 294
Query: 504 LDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEA 563
++ A L +M L G A+ + L+K + E L + G + + Y
Sbjct: 295 VELAFALFAQMFLRGCDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGCEPNVVAYNT 354
Query: 564 LLQSKIVQKDTPGALHLFKEMKESK-IPRSGHQEFEMLVKGCAQNHE-AGLMAKLLQEVK 621
L+ AL + +M+ S +P + +L+ G A++ + G + +
Sbjct: 355 LIHGLCSNGSLEEALQVCDQMQRSGCLPNV--TTYSILIDGFAKSGDLVGASETWNRMIS 412
Query: 622 EGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGK 681
G R + V + ++ CK + A +++M G PN TF++ + G G+
Sbjct: 413 HGCRPN--VVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTMTFNTFIKGLCG-NGR 469
Query: 682 YTEVTELWGEMKSFASSTSMNFDEELLD-------------------------------S 710
+L M+ ++ ELLD +
Sbjct: 470 VEWAMKLLERMQGHGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARNLQPNLVTYNT 529
Query: 711 VLYTFVRGGFFARANEVVAMMEEGKMFIDKYKYRTLFLKYHKTLYKGKTPKFQTEAQLKK 770
VLY F R G A ++ D Y T+ Y K +GK + AQL +
Sbjct: 530 VLYGFSRAGMMGEALQLFGKALVRGTAPDSITYNTMIHAYCK---QGKV---KIAAQLVE 583
Query: 771 REAALGFKKW 780
R +++ K+W
Sbjct: 584 RVSSM--KEW 591
Score = 43.9 bits (102), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 53/238 (22%), Positives = 103/238 (43%), Gaps = 27/238 (11%)
Query: 449 PTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVIT-------LCISL 501
P Y L+ F ++G + +E N +SH +V+T LC +
Sbjct: 382 PNVTTYSILIDGFAKSGD------LVGASETWNRMISH--GCRPNVVTYTCMVDVLCKN- 432
Query: 502 GWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCY 561
DQA+ L+++M L G ++ + + +K R LL + G + + Y
Sbjct: 433 SMFDQANSLVEKMTLEGCTPNTMTFNTFIKGLCGNGRVEWAMKLLERMQGHGCLPNITTY 492
Query: 562 EALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQ--- 618
LL + A LF+E+ E++ + + ++ G ++ AG+M + LQ
Sbjct: 493 NELLDALFRMNKYEEAFGLFQEI-EARNLQPNLVTYNTVLYGFSR---AGMMGEALQLFG 548
Query: 619 -EVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHL-PNAQTFHSMVTG 674
+ G D +N +IH +CK+ ++ A + ++R+ S+ P+ T+ S++ G
Sbjct: 549 KALVRGTAPD--SITYNTMIHAYCKQGKVKIAAQLVERVSSMKEWHPDIITYTSLIWG 604
>gi|449511869|ref|XP_004164076.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g48810-like [Cucumis sativus]
Length = 660
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 70/315 (22%), Positives = 123/315 (39%), Gaps = 41/315 (13%)
Query: 448 QPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENL-------------QVSHDDAALGH- 493
+PT +IY L+ A L K + + +K+ L +D H
Sbjct: 141 KPTVRIYNHLLDALLSENKFQMINPLYTNMKKDGLIPNVFTYNILLKALCKNDRVDAAHK 200
Query: 494 -------------VITLCISLGWLDQAHDLLDEMHLAG-VRASSSVYASLLKAYIEANRP 539
+T + L +A + D LAG + S VY +L+ + R
Sbjct: 201 LFVEMSNKGCPPDAVTYTTMVSSLCKAGKIDDARELAGRFKPSVPVYNALIDGMCKEGRI 260
Query: 540 REVTALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEM 599
LL + G+ + Y ++ S V + A LF +M + H F
Sbjct: 261 EVAIKLLGEMMDNGVDPNVVSYSCIINSLCVSGNVELAFALFAQMFLRGCDANIHT-FTP 319
Query: 600 LVKGC---AQNHEAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRM 656
L+KGC + +EA + KL+ +++G + V +N +IH C +++A + +M
Sbjct: 320 LIKGCFMRGKLYEALDLWKLM--IQDGCEPN--VVAYNTLIHGLCSNGSLEEALQVCDQM 375
Query: 657 RSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFV 716
+ G LPN T+ ++ G+A G +E W M S ++ ++D
Sbjct: 376 QRSGCLPNVTTYSILIDGFAK-SGDLVGASETWNRMISHGCRPNVVTYTCMVD----VLC 430
Query: 717 RGGFFARANEVVAMM 731
+ F +AN +V M
Sbjct: 431 KNSMFDQANSLVEKM 445
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 75/370 (20%), Positives = 138/370 (37%), Gaps = 50/370 (13%)
Query: 445 GILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVI-TLCISLGW 503
G +P+ +Y L+ + G+ + L E + V + + +I +LC+S G
Sbjct: 238 GRFKPSVPVYNALIDGMCKEGRIEVAIKLL--GEMMDNGVDPNVVSYSCIINSLCVS-GN 294
Query: 504 LDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEA 563
++ A L +M L G A+ + L+K + E L + G + + Y
Sbjct: 295 VELAFALFAQMFLRGCDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGCEPNVVAYNT 354
Query: 564 LLQSKIVQKDTPGALHLFKEMKESK-IPRSGHQEFEMLVKGCAQNHE-AGLMAKLLQEVK 621
L+ AL + +M+ S +P + +L+ G A++ + G + +
Sbjct: 355 LIHGLCSNGSLEEALQVCDQMQRSGCLPNV--TTYSILIDGFAKSGDLVGASETWNRMIS 412
Query: 622 EGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGK 681
G R + V + ++ CK + A +++M G PN TF++ + G G+
Sbjct: 413 HGCRPN--VVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTITFNTFIKGLCG-NGR 469
Query: 682 YTEVTELWGEMKSFASSTSMNFDEELLD-------------------------------S 710
+L M+ ++ ELLD +
Sbjct: 470 VEWAMKLLERMQGHGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARNLQPNLVTYNT 529
Query: 711 VLYTFVRGGFFARANEVVAMMEEGKMFIDKYKYRTLFLKYHKTLYKGKTPKFQTEAQLKK 770
VLY F R G A ++ D Y T+ Y K +GK + AQL +
Sbjct: 530 VLYGFSRAGMMGEALQLFGKALVRGTAPDSITYNTMIHAYCK---QGKV---KIAAQLVE 583
Query: 771 REAALGFKKW 780
R +++ K+W
Sbjct: 584 RVSSM--KEW 591
Score = 43.9 bits (102), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 53/238 (22%), Positives = 103/238 (43%), Gaps = 27/238 (11%)
Query: 449 PTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVIT-------LCISL 501
P Y L+ F ++G + +E N +SH +V+T LC +
Sbjct: 382 PNVTTYSILIDGFAKSGD------LVGASETWNRMISH--GCRPNVVTYTCMVDVLCKN- 432
Query: 502 GWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCY 561
DQA+ L+++M L G ++ + + +K R LL + G + + Y
Sbjct: 433 SMFDQANSLVEKMTLEGCTPNTITFNTFIKGLCGNGRVEWAMKLLERMQGHGCLPNITTY 492
Query: 562 EALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQ--- 618
LL + A LF+E+ E++ + + ++ G ++ AG+M + LQ
Sbjct: 493 NELLDALFRMNKYEEAFGLFQEI-EARNLQPNLVTYNTVLYGFSR---AGMMGEALQLFG 548
Query: 619 -EVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHL-PNAQTFHSMVTG 674
+ G D +N +IH +CK+ ++ A + ++R+ S+ P+ T+ S++ G
Sbjct: 549 KALVRGTAPD--SITYNTMIHAYCKQGKVKIAAQLVERVSSMKEWHPDIITYTSLIWG 604
>gi|15221671|ref|NP_176495.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169919|sp|Q9CAN6.1|PPR97_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g63070, mitochondrial; Flags: Precursor
gi|12323265|gb|AAG51617.1|AC010795_21 unknown protein; 38394-36551 [Arabidopsis thaliana]
gi|332195929|gb|AEE34050.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 590
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 65/280 (23%), Positives = 116/280 (41%), Gaps = 11/280 (3%)
Query: 478 EKENLQVSHDDAALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEAN 537
+ +NL +SH+ I L A +L +M G S SLL + N
Sbjct: 100 QMQNLGISHNLYTYSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGN 159
Query: 538 RPREVTALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEF 597
R E AL+ G Q D + L+ A+ L + M K + +
Sbjct: 160 RISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMV-VKGCQPDLVTY 218
Query: 598 EMLVKGCAQNHEAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMR 657
++ G + E L LL ++++G +I+ V +N +I CK + M DA +M
Sbjct: 219 GAVINGLCKRGEPDLALNLLNKMEKG-KIEADVVIYNTIIDGLCKYKHMDDAFDLFNKME 277
Query: 658 SLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVR 717
+ G P+ T++ +++ G++++ + L +M ++N D ++++ FV+
Sbjct: 278 TKGIKPDVFTYNPLISCLCNY-GRWSDASRLLSDM----LEKNINPDLVFFNALIDAFVK 332
Query: 718 GGFFARANEVVAMMEEGK-MFIDKYKYRTL---FLKYHKT 753
G A ++ M + K F D Y TL F KY +
Sbjct: 333 EGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRV 372
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 94/470 (20%), Positives = 185/470 (39%), Gaps = 65/470 (13%)
Query: 251 PNTNTFNIALAGCLLFETTRKAEQLLDIMPRIGVKADSNLLIIMAH-IYERNGRREELRK 309
P+ T N L G +A L+D M +G + D+ + H +++ N E +
Sbjct: 143 PSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVAL 202
Query: 310 LQRHIDEAVNLSDIQFRQFYNCLLSCHLKFGDLNSASKMVLEMLQRAKEARNSLAAAMLP 369
++R + + + + N L C DL L +L + ++ + + A ++
Sbjct: 203 VERMVVKGCQPDLVTYGAVINGL--CKRGEPDL------ALNLLNKMEKGK--IEADVVI 252
Query: 370 FNAV--GVNNRTPSEQNVNCTNSVDLENSGIIENHILSYEDFTKDRKFVALEAEVKRVLQ 427
+N + G+ + + N +E GI + + +Y ++ R+L
Sbjct: 253 YNTIIDGLCKYKHMDDAFDLFNK--METKGI-KPDVFTYNPLISCLCNYGRWSDASRLLS 309
Query: 428 TLLGMLQKQVELITTEHGILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEK---ENLQV 484
ML+K + P + L+ AF++ GK L++AEK E ++
Sbjct: 310 D---MLEKNI----------NPDLVFFNALIDAFVKEGK-------LVEAEKLYDEMVKS 349
Query: 485 SH---DDAALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPRE 541
H D A +I +++ ++ EM G+ ++ Y +L+ + +A
Sbjct: 350 KHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDN 409
Query: 542 VTALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLV 601
+ + S G+ D Y LL + AL +F+ M++ + M+
Sbjct: 410 AQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIE 469
Query: 602 KGCAQNHEAGLMAKLLQEVKEGQRIDCG---------VHDWNNVIHFFCKKRLMQDAEKA 652
C +AG +V++G + C V + ++ FC+K L ++A+
Sbjct: 470 ALC----KAG-------KVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADAL 518
Query: 653 LKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEMKS--FASSTS 700
M+ G LPN+ T+++++ G + EL EM+S FA S
Sbjct: 519 FVEMKEDGPLPNSGTYNTLIRARLRDGDEAAS-AELIKEMRSCGFAGDAS 567
Score = 47.8 bits (112), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 93/196 (47%), Gaps = 17/196 (8%)
Query: 539 PREVTALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFE 598
PR T L + AG D C E L + + A+ LF +M +S+ P EF
Sbjct: 24 PR--TTLCWERSFAGASSD-DCRENLSRKVLQDLKLDDAIGLFGDMVKSR-PFPSIVEFS 79
Query: 599 MLVKGCAQNHEAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRS 658
L+ A+ ++ L+ L +++ + I ++ ++ I++FC++ + A L +M
Sbjct: 80 KLLSAIAKMNKFDLVISLGEQM-QNLGISHNLYTYSIFINYFCRRSQLSLALAILGKMMK 138
Query: 659 LGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRG 718
LG+ P+ T +S++ G+ G + +E L +M M + D+V +T +
Sbjct: 139 LGYGPSIVTLNSLLNGFCH-GNRISEAVALVDQM------VEMGYQP---DTVTFTTLVH 188
Query: 719 GFFA--RANEVVAMME 732
G F +A+E VA++E
Sbjct: 189 GLFQHNKASEAVALVE 204
>gi|255557743|ref|XP_002519901.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223540947|gb|EEF42505.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 777
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 69/302 (22%), Positives = 125/302 (41%), Gaps = 11/302 (3%)
Query: 454 YIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQAHDLLDE 513
Y L+ A + GK +E F +K E + D ++ ++G +++A L E
Sbjct: 480 YNTLILACCKEGKVEE--GFKLKEEMVRRGIQPDMYTYNMLLHGLCNMGKIEEAGGLWHE 537
Query: 514 MHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQKD 573
G + Y ++ Y +ANR E L ++ + I+ +A Y L+++ +
Sbjct: 538 CKKNGNFPDAYTYGIMIDGYCKANRVEEGEKLFQEMVTMKIEQNAVVYGTLIRAYCENGN 597
Query: 574 TPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEV-KEGQRIDCGVHD 632
A L +M+ IP++ + L+ G + +LL E+ KEG + V
Sbjct: 598 MREAFRLRDDMRSRGIPQTS-ATYSSLIHGLSNIGLVDSANQLLDEMRKEG--LSPNVVC 654
Query: 633 WNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEM 692
+ +I +CK M + L+ M PN T+ M+ G+ +G +L EM
Sbjct: 655 YTALIGGYCKLGQMHKVDSILQEMSINNVHPNKITYTIMINGHCKLG-NMKAAAKLLNEM 713
Query: 693 KSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFIDKYKYRTLFLKYHK 752
+ + D +++ F + G A +V +M G + +D Y TL +HK
Sbjct: 714 ----AQKGIVPDAVTYNALTNGFCKEGKMEEALKVCDLMSTGGISLDDITYTTLIDGWHK 769
Query: 753 TL 754
L
Sbjct: 770 PL 771
Score = 52.8 bits (125), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 71/282 (25%), Positives = 116/282 (41%), Gaps = 30/282 (10%)
Query: 447 LQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDA-ALGHVITLCISLGWLD 505
+QP Y L+ GK +E + +K + DA G +I ++
Sbjct: 508 IQPDMYTYNMLLHGLCNMGKIEEAGGLWHECKKNG---NFPDAYTYGIMIDGYCKANRVE 564
Query: 506 QAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALL 565
+ L EM + ++ VY +L++AY E RE L D RS GI ++ Y +L+
Sbjct: 565 EGEKLFQEMVTMKIEQNAVVYGTLIRAYCENGNMREAFRLRDDMRSRGIPQTSATYSSLI 624
Query: 566 Q--SKIVQKDTPGALHLFKEM-KESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKE 622
S I D+ A L EM KE P + L+ G + + + +LQE+
Sbjct: 625 HGLSNIGLVDS--ANQLLDEMRKEGLSPNV--VCYTALIGGYCKLGQMHKVDSILQEMSI 680
Query: 623 GQRIDCGVH----DWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAI 678
VH + +I+ CK M+ A K L M G +P+A T++++ G+
Sbjct: 681 NN-----VHPNKITYTIMINGHCKLGNMKAAAKLLNEMAQKGIVPDAVTYNALTNGFCK- 734
Query: 679 GGKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGF 720
GK E ++ M + S LD + YT + G+
Sbjct: 735 EGKMEEALKVCDLMSTGGIS---------LDDITYTTLIDGW 767
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 72/328 (21%), Positives = 123/328 (37%), Gaps = 52/328 (15%)
Query: 447 LQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQ 506
+ P Y ++ + G+ E F K EKE ++ S G +I + L D+
Sbjct: 228 VAPNVVTYNNIIHGLCKNGRLDEAFQFKEKMEKERVKPSL--VTYGVLINGLVKLERFDE 285
Query: 507 AHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQ 566
A+ +L EM G ++ VY +L+ Y + D S GI ++ +L+Q
Sbjct: 286 ANCILKEMSDRGYAPNNVVYNTLIDGYCRIGNISTALQIRDDMISNGISPNSVTCNSLIQ 345
Query: 567 SKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRI 626
A HL +EM + G I
Sbjct: 346 GYCKSNQMEHAEHLLEEM-----------------------------------LTGGGVI 370
Query: 627 DCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVT 686
+ G + +VIH C K A + M PN +V+G GK +E
Sbjct: 371 NQGT--FTSVIHRLCLKCRFDSALLFIMEMLLRNFKPNDGLLTLLVSGLCQ-NGKQSEAI 427
Query: 687 ELWGEM--KSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFIDKYKYR 744
ELW + K FA++T + +++++ G A +++ M E + +D Y
Sbjct: 428 ELWYRLLEKGFAANTVTS------NALIHGLCEAGSKEEAAKLLKEMLERGLVLDSISYN 481
Query: 745 TLFLKYHKTLYKGKTPK-FQTEAQLKKR 771
TL L K +GK + F+ + ++ +R
Sbjct: 482 TLILACCK---EGKVEEGFKLKEEMVRR 506
Score = 38.9 bits (89), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 48/236 (20%), Positives = 91/236 (38%), Gaps = 9/236 (3%)
Query: 518 GVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQKDTPGA 577
G A++ +L+ EA E LL++ G+ LD+ Y L+ + +
Sbjct: 437 GFAANTVTSNALIHGLCEAGSKEEAAKLLKEMLERGLVLDSISYNTLILACCKEGKVEEG 496
Query: 578 LHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRIDCGVHDWNNVI 637
L +EM I + + ML+ G + L E K+ + + +I
Sbjct: 497 FKLKEEMVRRGI-QPDMYTYNMLLHGLCNMGKIEEAGGLWHECKKNGNFP-DAYTYGIMI 554
Query: 638 HFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEMKSFA- 696
+CK +++ EK + M ++ NA + +++ Y G E L +M+S
Sbjct: 555 DGYCKANRVEEGEKLFQEMVTMKIEQNAVVYGTLIRAYCE-NGNMREAFRLRDDMRSRGI 613
Query: 697 SSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFIDKYKYRTLFLKYHK 752
TS + S+++ G AN+++ M + + + Y L Y K
Sbjct: 614 PQTSATY-----SSLIHGLSNIGLVDSANQLLDEMRKEGLSPNVVCYTALIGGYCK 664
>gi|15236546|ref|NP_194913.1| proton gradient regulation 3 [Arabidopsis thaliana]
gi|75213543|sp|Q9SZ52.1|PP344_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g31850,
chloroplastic; AltName: Full=Protein PROTON GRADIENT
REGULATION 3; Flags: Precursor
gi|4584524|emb|CAB40755.1| putative protein [Arabidopsis thaliana]
gi|7270088|emb|CAB79903.1| putative protein [Arabidopsis thaliana]
gi|332660567|gb|AEE85967.1| proton gradient regulation 3 [Arabidopsis thaliana]
Length = 1112
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 81/178 (45%), Gaps = 1/178 (0%)
Query: 502 GWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCY 561
G L +A L + M G R + ++Y L+ + +A AL + G++ D Y
Sbjct: 905 GRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTY 964
Query: 562 EALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVK 621
L+ + LH FKE+KES + + +++ G ++H L E+K
Sbjct: 965 SVLVDCLCMVGRVDEGLHYFKELKESGL-NPDVVCYNLIINGLGKSHRLEEALVLFNEMK 1023
Query: 622 EGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIG 679
+ I ++ +N++I ++++A K ++ G PN TF++++ GY+ G
Sbjct: 1024 TSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSG 1081
Score = 44.3 bits (103), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 54/266 (20%), Positives = 103/266 (38%), Gaps = 13/266 (4%)
Query: 493 HVITLCISL----GWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRD 548
+ T+CI + G +++A+++L M G Y L+ A A + +
Sbjct: 259 YTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEK 318
Query: 549 ARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEM-KESKIPRSGHQEFEMLVKGCAQN 607
++ + D Y LL +D + EM K+ +P F +LV +
Sbjct: 319 MKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDV--VTFTILVDALCKA 376
Query: 608 HEAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQT 667
G L +V Q I +H +N +I + + DA + M SLG P A T
Sbjct: 377 GNFGEAFDTL-DVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYT 435
Query: 668 FHSMVTGYAAIGGKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEV 727
+ + Y G + + E + +MK+ + ++ ++ LY+ + G A ++
Sbjct: 436 YIVFIDYYGKSGDSVSAL-ETFEKMKTKGIAPNI----VACNASLYSLAKAGRDREAKQI 490
Query: 728 VAMMEEGKMFIDKYKYRTLFLKYHKT 753
+++ + D Y + Y K
Sbjct: 491 FYGLKDIGLVPDSVTYNMMMKCYSKV 516
>gi|224133106|ref|XP_002327962.1| predicted protein [Populus trichocarpa]
gi|222837371|gb|EEE75750.1| predicted protein [Populus trichocarpa]
Length = 487
Score = 62.8 bits (151), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 61/267 (22%), Positives = 114/267 (42%), Gaps = 11/267 (4%)
Query: 448 QPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVIT--LCISLGWLD 505
QP Y ++K F + GKT L K +K D + + I LC +
Sbjct: 186 QPNLHTYNTIIKGFCKIGKTTVAVGLLKKMDKAG---GRPDIVIYNTIIDGLCKD-RLVS 241
Query: 506 QAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALL 565
+A D+ E+ GVR Y+ L+ +++ E +AL + S I D + L+
Sbjct: 242 EALDIFSEIKGKGVRPDVFTYSILMHGLCNSDQKEEASALFNEMMSLNIMPDVVTFNILV 301
Query: 566 QSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKG-CAQNHEAGLMAKLLQEVKEGQ 624
+ A + K M E + + + L+ G C QN A+++ + +
Sbjct: 302 DKLCKEGMLSEAQGIIKIMIEKGV-EPNYATYNSLMNGYCLQNKV--FEARMVFDAMITK 358
Query: 625 RIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTE 684
V +N +I+ +CK + + +A + M G +PN ++++++G G++ E
Sbjct: 359 GCMPNVVSYNILINGYCKAQRIDEARELFDEMSFRGLIPNTFNYNTLISGLCQ-AGRHCE 417
Query: 685 VTELWGEMKSFASSTSMNFDEELLDSV 711
EL+ +M++ S + LLDS+
Sbjct: 418 ARELFKDMQAQGCSPDLVTCTILLDSL 444
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/171 (22%), Positives = 77/171 (45%), Gaps = 2/171 (1%)
Query: 506 QAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALL 565
+A + DEM +G + + Y +++K + + + LL+ AG + D Y ++
Sbjct: 172 RAMEFFDEMVASGYQPNLHTYNTIIKGFCKIGKTTVAVGLLKKMDKAGGRPDIVIYNTII 231
Query: 566 QSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQR 625
+ AL +F E+K + R + +L+ G + + + L E+
Sbjct: 232 DGLCKDRLVSEALDIFSEIKGKGV-RPDVFTYSILMHGLCNSDQKEEASALFNEMMS-LN 289
Query: 626 IDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYA 676
I V +N ++ CK+ ++ +A+ +K M G PN T++S++ GY
Sbjct: 290 IMPDVVTFNILVDKLCKEGMLSEAQGIIKIMIEKGVEPNYATYNSLMNGYC 340
Score = 41.6 bits (96), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 40/84 (47%)
Query: 504 LDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEA 563
+D+A +L DEM G+ ++ Y +L+ +A R E L +D ++ G D
Sbjct: 380 IDEARELFDEMSFRGLIPNTFNYNTLISGLCQAGRHCEARELFKDMQAQGCSPDLVTCTI 439
Query: 564 LLQSKIVQKDTPGALHLFKEMKES 587
LL S AL LF+ M++S
Sbjct: 440 LLDSLCKLGYLDNALRLFRAMQDS 463
>gi|242039357|ref|XP_002467073.1| hypothetical protein SORBIDRAFT_01g019180 [Sorghum bicolor]
gi|241920927|gb|EER94071.1| hypothetical protein SORBIDRAFT_01g019180 [Sorghum bicolor]
Length = 808
Score = 62.8 bits (151), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 99/212 (46%), Gaps = 11/212 (5%)
Query: 521 ASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHL 580
++S V+ +L +Y A + +L S +Q+ + Y++LL S + + D AL +
Sbjct: 146 SNSIVWDALANSYARAQMNHDALYVLSKMSSLNMQISITTYDSLLYS-LRKADV--ALEI 202
Query: 581 FKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEV-KEGQRIDCGVHDWNNVIHF 639
FKEM+ IP S + +L+ G + + G LQE+ KEG+ I G+ +N ++
Sbjct: 203 FKEMESCGIPPSDYSH-SILIDGLCKQDKIGEALSFLQEIRKEGKFIPLGM-TFNTLMSA 260
Query: 640 FCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEMKSFASST 699
C +QDA+ M G P+ T+ +++ G IG V+E + +S +
Sbjct: 261 LCNWGFIQDAKSVFCLMLKYGLNPSRHTYSTIIHGLCKIG----SVSEAFNIFQS-VTEE 315
Query: 700 SMNFDEELLDSVLYTFVRGGFFARANEVVAMM 731
M D +S++ F G +++ MM
Sbjct: 316 GMELDIVTCNSLINGFRLHGHTREIPKMIEMM 347
Score = 42.4 bits (98), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 54/290 (18%), Positives = 114/290 (39%), Gaps = 34/290 (11%)
Query: 407 EDFTKDRKFVALEAEVKRVLQTLL--GMLQ--KQVELITTEHGILQPTEKIYIKLVKAFL 462
++ K+ KF+ L ++ L G +Q K V + ++G L P+ Y ++
Sbjct: 239 QEIRKEGKFIPLGMTFNTLMSALCNWGFIQDAKSVFCLMLKYG-LNPSRHTYSTIIHGLC 297
Query: 463 EAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISL-------GWLDQAHDLLDEMH 515
+ G E + +E +++ I C SL G + +++ M
Sbjct: 298 KIGSVSEAFNIFQSVTEEGMELD---------IVTCNSLINGFRLHGHTREIPKMIEMMR 348
Query: 516 LAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQKDTP 575
GV Y L+ + E E + +D G++L+ Y L+ + +
Sbjct: 349 GLGVEPDIVTYTILIAGHCEGGDVEEGMKIRKDILGQGMELNIVTYSVLINALFKKG--- 405
Query: 576 GALHLFKEMKE--SKIPRSGHQ----EFEMLVKGCAQNHEAGLMAKLLQEVKEGQRIDCG 629
LF E++ +I G + + +L+ G ++ E G ++ + QR+
Sbjct: 406 ----LFYEVENLLGEICSVGLELDVIAYSILIHGYSKLGEIGRALQVWNLMCSSQRVTPT 461
Query: 630 VHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIG 679
+ +++ CKK + +A L+ + S + ++ ++ GYA +G
Sbjct: 462 SVNHVSILLGLCKKGFLDEARSYLETIASKYQPSDVVLYNVVIDGYAKVG 511
>gi|356503440|ref|XP_003520516.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g41720-like [Glycine max]
Length = 832
Score = 62.8 bits (151), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 54/234 (23%), Positives = 109/234 (46%), Gaps = 7/234 (2%)
Query: 500 SLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDAS 559
S G L A +L EM G++ + +LL A +R ++ +L A GI+L+
Sbjct: 445 SNGLLADAIKILREMEQEGIQPNVVSICTLLAACGRCSRKVKIDTVLTAAEMRGIKLNTV 504
Query: 560 CYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQE 619
Y A + S + + A+ L+K M++ KI ++ + +L+ GC + + G ++E
Sbjct: 505 AYNAAIGSCMNVGEYDKAIGLYKSMRKKKI-KTDSVTYTVLISGCCKMSKYGEALSFMEE 563
Query: 620 VKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIG 679
+ ++ +++ I + K+ + +AE M+S G P+ T+ +M+ Y A
Sbjct: 564 IMH-LKLPLSKEVYSSAICAYSKQGQIVEAESTFNLMKSSGCYPDVVTYTAMLDAYNA-A 621
Query: 680 GKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEE 733
+ + L+ EM+ ++S+ D +++ +F +GG R + M E
Sbjct: 622 ENWEKAYALFEEME----ASSIKLDTIACAALMRSFNKGGQPGRVLSLAESMRE 671
Score = 40.4 bits (93), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 35/175 (20%), Positives = 78/175 (44%), Gaps = 4/175 (2%)
Query: 507 AHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQ 566
A +++D+M A + S S Y +L+ A + +E + + G+ D + +L
Sbjct: 205 AMNIMDDMLRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTENGVGPDLVTHNIILS 264
Query: 567 SKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRI 626
+ AL F+ MK + I R +++ + + ++ ++E ++
Sbjct: 265 AFKSGAQYSKALSYFELMKGTHI-RPDTTTLNIVIHCLVKLRQYDKAIEIFNSMRE-KKS 322
Query: 627 DC--GVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIG 679
+C V + ++IH + +++ E A M + G PN ++++++ YAA G
Sbjct: 323 ECTPDVVTFTSIIHLYSVCGQVENCEAAFNMMIAEGLKPNIVSYNALIGAYAARG 377
>gi|334183628|ref|NP_001185309.1| tetratricopeptide repeat-like protein [Arabidopsis thaliana]
gi|193806276|sp|P0C7R3.1|PP106_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g64583, mitochondrial; Flags: Precursor
gi|332196135|gb|AEE34256.1| tetratricopeptide repeat-like protein [Arabidopsis thaliana]
Length = 512
Score = 62.8 bits (151), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 81/178 (45%), Gaps = 2/178 (1%)
Query: 502 GWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCY 561
G L+ A +LL+EM G+ A Y +LL + R + +LRD I D +
Sbjct: 190 GELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTF 249
Query: 562 EALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVK 621
AL+ + Q + A L+KEM +S + + + ++ G H AK ++
Sbjct: 250 TALIDVFVKQGNLDEAQELYKEMIQSSVD-PNNVTYNSIINGLCM-HGRLYDAKKTFDLM 307
Query: 622 EGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIG 679
+ V +N +I FCK R++ + K +RM G + T+++++ GY +G
Sbjct: 308 ASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVG 365
Score = 45.4 bits (106), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 56/266 (21%), Positives = 103/266 (38%), Gaps = 11/266 (4%)
Query: 447 LQPTEKIYIKLVKAFLEAG---KTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGW 503
+ P + L+ F++ G + +EL +I++ + V+++ G LC+ G
Sbjct: 242 INPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIING----LCMH-GR 296
Query: 504 LDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEA 563
L A D M G + Y +L+ + + E L + G D Y
Sbjct: 297 LYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNT 356
Query: 564 LLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEG 623
L+ AL +F M ++ +L C + K +++E
Sbjct: 357 LIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKF-DDMRES 415
Query: 624 QRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYT 683
++ G+ +N +IH CK ++ A + R+ G P+A+T+ M+ G G
Sbjct: 416 EKY-IGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCK-NGPRR 473
Query: 684 EVTELWGEMKSFASSTSMNFDEELLD 709
E EL MK MN +++ L+
Sbjct: 474 EADELIRRMKEEGIICQMNAEDDHLE 499
Score = 44.3 bits (103), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 74/374 (19%), Positives = 143/374 (38%), Gaps = 56/374 (14%)
Query: 448 QPTEKI--YIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLD 505
QP I + +L+ A + + + +F K E +SHD + +I L
Sbjct: 66 QPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYG--ISHDLYSFTILIHCFCRCSRLS 123
Query: 506 QAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALL 565
A +L +M G S + SLL + NR + +L+ +G + + Y L+
Sbjct: 124 FALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYNTLI 183
Query: 566 QSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQE------ 619
+ AL L EM E K + + L+ G + A++L++
Sbjct: 184 DGLCKNGELNIALELLNEM-EKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSI 242
Query: 620 --------------VKEGQ--------------RIDCGVHDWNNVIHFFCKKRLMQDAEK 651
VK+G +D +N++I+ C + DA+K
Sbjct: 243 NPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKK 302
Query: 652 ALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEMKSFASSTSMNFDEELL--D 709
M S G PN T++++++G+ K+ V E MK F + F+ ++ +
Sbjct: 303 TFDLMASKGCFPNVVTYNTLISGFC----KFRMVDE---GMKLFQRMSCEGFNADIFTYN 355
Query: 710 SVLYTFVRGGFFARANEVVAMMEEGKMFIDKYKYRTLFLKYHKTLYKGKTPKFQTEAQLK 769
++++ + + G A ++ M ++ D + H L G + E+ L
Sbjct: 356 TLIHGYCQVGKLRVALDIFCWMVSRRVTPD--------IITHCILLHGLCVNGEIESALV 407
Query: 770 KREAALGFKKWLGL 783
K + +K++G+
Sbjct: 408 KFDDMRESEKYIGI 421
>gi|449018641|dbj|BAM82043.1| hypothetical protein, conserved [Cyanidioschyzon merolae strain
10D]
Length = 805
Score = 62.8 bits (151), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 93/220 (42%), Gaps = 3/220 (1%)
Query: 453 IYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQAHDLLD 512
+Y ++K AG+ L + E +N V D G ++ +C + A+ +LD
Sbjct: 470 VYNAVLKYVGRAGRIDAALDLLGQME-QNRNVQPDIVTYGTILDICAKKQDVSLAYAVLD 528
Query: 513 EMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQK 572
M G+R ++ YASL+ A A P + +L R R+ G++ D ALL + K
Sbjct: 529 RMRKRGMRPNNFCYASLIDACARAGLPDQAESLFRQLRAEGLEYDLFICNALLGAFARAK 588
Query: 573 DTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRIDCGVHD 632
A F+EM+ + + R F L+ A+ E K + +K+ I
Sbjct: 589 MVERAFQAFEEMRSAGV-RGDRITFNTLITAAARAREFDKAWKAFETMKKSN-ISADATT 646
Query: 633 WNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMV 672
+N +I K + + A MR P TF++++
Sbjct: 647 YNALIDACSKSGMTELAFALFNEMRQAHLQPTIFTFNALI 686
>gi|255575351|ref|XP_002528578.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223531974|gb|EEF33786.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 817
Score = 62.8 bits (151), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 96/465 (20%), Positives = 191/465 (41%), Gaps = 33/465 (7%)
Query: 253 TNTFNIALA--GCLLFETTRKAEQLLDIMPRIGVKADSNLLIIMAHIYERNGRREELRKL 310
T+TF A A + + + + LD M + GV+ + + I + R + +R
Sbjct: 174 TDTFMYAKAIQAAVKLQNLKMGMEFLDSMRKRGVRPN---VFIYNVLIGGLCREKRIRDA 230
Query: 311 QRHIDEAVNLSDIQFRQFYNCLLSCHLKFGDLNSASKMVLEMLQRAKEAR----NSLAAA 366
++ DE N++ + YN L+ + K G+L++A KM M +++ NSL +
Sbjct: 231 EKMFDEMCNINLVGSIVTYNTLIDGYCKVGELDAAFKMRERMKEKSVAPNIITFNSLLSG 290
Query: 367 MLPFNAVGVNNRTPSEQNVNCTNSVDLENSGIIENHILSYEDFT--------KDRKFVAL 418
+ + E VN D I+ + +L +D K + +
Sbjct: 291 LCKMRKMKEARSLLKEMEVNGFMP-DGYTYSILFDGLLRCDDGNGAMELYEQATEKGIRI 349
Query: 419 EAEVKRVLQTLL---GMLQKQVELIT--TEHGILQPTEKIYIKLVKAFLEAGKTKELTHF 473
+L L G ++K E++ TE+G++ E IY V + G ++
Sbjct: 350 NNYTGSILLNGLCKQGKVEKAEEILKKFTENGLV-ADEVIYNTFVNGYCRIG---DMNKA 405
Query: 474 LIKAEK-ENLQVSHDDAALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKA 532
++ E+ E+ + + +I + +D+A + + +M GV S Y +L+
Sbjct: 406 ILTIERMESFGLRPNSITFNSLIDKFCDMKEMDKAEEWVKKMAEKGVTPSVETYNTLIDG 465
Query: 533 YIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEM-KESKIPR 591
Y + +L G++ + Y +L+ A + ++M +P
Sbjct: 466 YGKLCTFDRCFQILEQMEEIGVKPNVVSYGSLINCLCKDGKILEAEIVLRDMICRGVLPN 525
Query: 592 SGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEK 651
+ Q + ML+ G + + E+ + I + +N +I CKK + +AE
Sbjct: 526 A--QVYNMLIDGSCMVGKVKDALRFFDEMMRSE-ISPTLVTYNVLIDGLCKKGKLTEAED 582
Query: 652 ALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEMKSFA 696
L ++ S GH P+ T++S+++GYA G ++ L+ MK+
Sbjct: 583 FLTQITSSGHSPDVITYNSLISGYAN-AGNVSKCLGLYETMKNLG 626
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/255 (22%), Positives = 108/255 (42%), Gaps = 14/255 (5%)
Query: 501 LGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASC 560
L D+ +L++M GV+ + Y SL+ + + E +LRD G+ +A
Sbjct: 469 LCTFDRCFQILEQMEEIGVKPNVVSYGSLINCLCKDGKILEAEIVLRDMICRGVLPNAQV 528
Query: 561 YEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKG-CAQNHEAGLMAKLLQE 619
Y L+ + AL F EM S+I + + +L+ G C + L Q
Sbjct: 529 YNMLIDGSCMVGKVKDALRFFDEMMRSEISPT-LVTYNVLIDGLCKKGKLTEAEDFLTQI 587
Query: 620 VKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIG 679
G D V +N++I + + + M++LG P +T+H +++G + G
Sbjct: 588 TSSGHSPD--VITYNSLISGYANAGNVSKCLGLYETMKNLGIKPTVRTYHPLISGCSKEG 645
Query: 680 GKYTEVTELWGEMKSFASSTSMNF--DEELLDSVLYTFVRGGFFARANEVVAMMEEGKMF 737
+ E +L+ EM MN D + +++++ + G +A + M + +
Sbjct: 646 IELVE--KLYNEM------LQMNLLPDRVVYNAMIHCYAEIGNTQKAYSLHQGMLDQGIH 697
Query: 738 IDKYKYRTLFLKYHK 752
DK Y +L L + +
Sbjct: 698 PDKMTYNSLILGHFR 712
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 53/234 (22%), Positives = 102/234 (43%), Gaps = 9/234 (3%)
Query: 501 LGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASC 560
+G LD A + + M V + + SLL + + +E +LL++ G D
Sbjct: 259 VGELDAAFKMRERMKEKSVAPNIITFNSLLSGLCKMRKMKEARSLLKEMEVNGFMPDGYT 318
Query: 561 YEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEV 620
Y L + D GA+ L+++ E I R + +L+ G + + ++L++
Sbjct: 319 YSILFDGLLRCDDGNGAMELYEQATEKGI-RINNYTGSILLNGLCKQGKVEKAEEILKKF 377
Query: 621 KEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGG 680
E + V +N ++ +C+ M A ++RM S G PN+ TF+S++ + +
Sbjct: 378 TENGLVADEVI-YNTFVNGYCRIGDMNKAILTIERMESFGLRPNSITFNSLIDKFCDM-- 434
Query: 681 KYTEVTELW-GEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEE 733
K + E W +M + S+ L+D + + F R +++ MEE
Sbjct: 435 KEMDKAEEWVKKMAEKGVTPSVETYNTLIDG----YGKLCTFDRCFQILEQMEE 484
>gi|359475386|ref|XP_003631674.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39710-like [Vitis vinifera]
Length = 762
Score = 62.8 bits (151), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 92/206 (44%), Gaps = 18/206 (8%)
Query: 502 GWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCY 561
G LD+A + EM GV + Y+SL++ E R E L ++ G+ D Y
Sbjct: 473 GELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRRLTEACDLSQEMLDMGLPPDEFTY 532
Query: 562 EALLQSKIVQKDTPGALHLFKEM-KESKIPRSGHQEFEMLVKGC---AQNHEAG-LMAKL 616
L+ + V+ D ALHL EM + +P + + +L+ G A+ EA L+ KL
Sbjct: 533 TTLINAYCVEGDLNKALHLHDEMIHKGFLPDA--VTYSVLINGLNKQARTREAKRLLFKL 590
Query: 617 LQE--VKEGQRIDCGVHDWNNV--------IHFFCKKRLMQDAEKALKRMRSLGHLPNAQ 666
+ E V D + + +N+ I FC K LM +A++ + M H P
Sbjct: 591 IYEESVPSDVTYDTLIENCSNIEFKSVVALIKGFCMKGLMHEADRVFESMVERNHKPGEA 650
Query: 667 TFHSMVTGYAAIGGKYTEVTELWGEM 692
++ ++ G+ GG + L+ EM
Sbjct: 651 VYNVIIHGHCR-GGNLPKAFNLYKEM 675
Score = 49.3 bits (116), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 56/278 (20%), Positives = 109/278 (39%), Gaps = 18/278 (6%)
Query: 449 PTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQAH 508
P E Y L+ + + G + +I AE VS +I L++A
Sbjct: 317 PDEVTYNTLLNGYCKEGNFHQA--LVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAM 374
Query: 509 DLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSK 568
+ D+M + G+R + Y +L+ + E +L + +G Y A +
Sbjct: 375 EFFDQMRIRGLRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGH 434
Query: 569 IVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRIDC 628
V + AL + +EM E + + ++ G + E ++ QE+ E + +
Sbjct: 435 CVLERMEEALGVVQEMVEKGLAPDV-VSYSTIISGFCRKGELDRAFQMKQEMVE-KGVSP 492
Query: 629 GVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTEL 688
++++I C+ R + +A + M +G P+ T+ +++ Y + G + L
Sbjct: 493 DAVTYSSLIQGLCEMRRLTEACDLSQEMLDMGLPPDEFTYTTLINAY-CVEGDLNKALHL 551
Query: 689 WGEM--KSFASSTSMNFDEELLDSVLYTFVRGGFFARA 724
EM K F L D+V Y+ + G +A
Sbjct: 552 HDEMIHKGF-----------LPDAVTYSVLINGLNKQA 578
Score = 49.3 bits (116), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 102/222 (45%), Gaps = 21/222 (9%)
Query: 510 LLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKI 569
L D H+ +SS+V+ ++K+Y N + + A+S+G Y ++L + +
Sbjct: 131 LKDSYHV--YNSSSAVFDLMVKSYSHLNMIDQAVNTINLAKSSGFMPGVLSYNSVLDAIV 188
Query: 570 VQKDTP--GALHLFKEMKESKIPRSGHQEFEMLVKG-CAQNHEAGLMAKLLQEVKEGQRI 626
+ + A +++EM S++ + + + +L++G C+ G + K L E +R
Sbjct: 189 RSRGSVKLSAEEVYREMIRSRVSPNVYT-YNILIRGFCS----VGELQKGLGCFGEMERN 243
Query: 627 DC--GVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTE 684
C V +N +I +CK + +A LK M S G PN +++ ++ G G E
Sbjct: 244 GCLPNVVTYNTLIDAYCKMGRIDEAFGLLKSMSSKGMQPNLISYNVIINGLCR-EGSMKE 302
Query: 685 VTELWGEM--KSFASSTSMNFDEELLDSVLYTFVRGGFFARA 724
E+ EM K F DE +++L + + G F +A
Sbjct: 303 AWEILEEMGYKGFTP------DEVTYNTLLNGYCKEGNFHQA 338
Score = 47.8 bits (112), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 45/203 (22%), Positives = 82/203 (40%), Gaps = 5/203 (2%)
Query: 500 SLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDAS 559
S+G L + EM G + Y +L+ AY + R E LL+ S G+Q +
Sbjct: 226 SVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGRIDEAFGLLKSMSSKGMQPNLI 285
Query: 560 CYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKG-CAQNHEAGLMAKLLQ 618
Y ++ + A + +EM + L+ G C + + + +
Sbjct: 286 SYNVIINGLCREGSMKEAWEILEEMGYKGFT-PDEVTYNTLLNGYCKEGNFHQALVIHAE 344
Query: 619 EVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAI 678
V+ G + V + +I+ CK R + A + +MR G PN +T+ +++ G++
Sbjct: 345 MVRNG--VSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRPNERTYTTLIDGFSR- 401
Query: 679 GGKYTEVTELWGEMKSFASSTSM 701
G E + EM S S+
Sbjct: 402 QGLLNEAYRILNEMTESGFSPSV 424
>gi|22327132|ref|NP_680234.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174514|sp|Q9LKU8.1|PP401_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g28460
gi|9502149|gb|AAF88002.1| contains similarity to Pfam family PF01535 (Domain of unknown
function), score=340.5, E=1.9e-98, N=2 [Arabidopsis
thaliana]
gi|15529206|gb|AAK97697.1| AT5g28460/F21B23_120 [Arabidopsis thaliana]
gi|27363272|gb|AAO11555.1| At5g28460/F21B23_120 [Arabidopsis thaliana]
gi|332006418|gb|AED93801.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 766
Score = 62.8 bits (151), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 72/328 (21%), Positives = 136/328 (41%), Gaps = 30/328 (9%)
Query: 449 PTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQAH 508
P Y L+ + AGK ++ KE + +D +V+T+ +G + + H
Sbjct: 404 PNAVTYNCLIDGYCRAGK--------LETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHH 455
Query: 509 DL------LDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYE 562
L +M GV+ + Y +L+ A + + AG DA Y
Sbjct: 456 GLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYY 515
Query: 563 ALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVK-GCAQNHEAGLMAKLLQEVK 621
AL+ + A+ + +++KE + ML+ C +N+ + L K
Sbjct: 516 ALISGLCQVRRDHDAIRVVEKLKEGGFSLD-LLAYNMLIGLFCDKNNAEKVYEMLTDMEK 574
Query: 622 EGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGK 681
EG++ D +N +I FF K + + E+ +++MR G P T+ +++ Y ++G
Sbjct: 575 EGKKPDSIT--YNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVG-- 630
Query: 682 YTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFIDKY 741
E+ E K + +N + + + ++ F + G F +A +++ EE KM + +
Sbjct: 631 --ELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQA---LSLKEEMKMKMVRP 685
Query: 742 KYRTLFLKYHKTLYKGKTPKFQTEAQLK 769
T + L+K K Q E LK
Sbjct: 686 NVET-----YNALFKCLNEKTQGETLLK 708
>gi|225446761|ref|XP_002278350.1| PREDICTED: pentatricopeptide repeat-containing protein At3g59040
[Vitis vinifera]
gi|302143502|emb|CBI22063.3| unnamed protein product [Vitis vinifera]
Length = 548
Score = 62.8 bits (151), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 56/234 (23%), Positives = 105/234 (44%), Gaps = 10/234 (4%)
Query: 448 QPTEKIYIKLVKAFLEAGKTKELTH-FLIKAEKENLQVSHDDAALGHVITLCISLGWLDQ 506
+P+ Y ++K F+E K KE F + E + D +I + G ++
Sbjct: 207 EPSALTYQLILKIFVEGNKFKEAEETFETLLDDEKSPLKPDQKMFHMMIYMYRKAGNYEK 266
Query: 507 AHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQ 566
A + M GV S+ Y SL+ E N +EV+ + AG++ D Y L+
Sbjct: 267 ARKIFGLMRERGVPQSTVTYNSLMS--FETNY-KEVSKTYDQMQRAGLRPDVVSYALLIN 323
Query: 567 SKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRI 626
+ + AL +F+EM ++ + R H+ + +L+ A +G++ + K +R
Sbjct: 324 AYGKARREEEALAVFEEMLDAGV-RPTHKAYNILLDAFAI---SGMVDQARTVFKSMRRD 379
Query: 627 DC--GVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAI 678
C + + ++ + M+ AEK +R++ G PN T+ +++ GYA I
Sbjct: 380 RCTPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFEPNVVTYGTLIKGYAKI 433
Score = 41.2 bits (95), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 38/185 (20%), Positives = 77/185 (41%), Gaps = 5/185 (2%)
Query: 447 LQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQ 506
++PT K Y L+ AF +G + ++ + + D + +++ ++ ++
Sbjct: 346 VRPTHKAYNILLDAFAISGMVDQARTVFKSMRRD--RCTPDICSYTTMLSAYVNASDMEG 403
Query: 507 AHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQ 566
A + G + Y +L+K Y + + ++ + + GI+ + + Y A++
Sbjct: 404 AEKFFRRLKQDGFEPNVVTYGTLIKGYAKISNLEKMMEKYEEMQVHGIKANQAIYTAMMD 463
Query: 567 SKIVQKDTPGALHLFKEMKESKIP--RSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQ 624
+ KD A+ FKEM +P R L K A+ EA L+ + GQ
Sbjct: 464 AYGKNKDFGSAVFWFKEMGFCGVPPDRKATNILLSLAKTEAEKEEANLLVGYSSKYSNGQ 523
Query: 625 RIDCG 629
+D G
Sbjct: 524 -MDNG 527
>gi|356506793|ref|XP_003522160.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At4g17915-like [Glycine max]
Length = 461
Score = 62.8 bits (151), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 59/251 (23%), Positives = 106/251 (42%), Gaps = 12/251 (4%)
Query: 504 LDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEA 563
LD A+ +L MH AG+ + +L+ + + + L + GI DA +
Sbjct: 64 LDVAYSVLARMHDAGIPPDVVSFNTLISGAVRKSLFSKSLDLFDEMLKRGINPDAWSHNI 123
Query: 564 LLQSKIVQKDTPGALHLFKE--MKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVK 621
L+ A +FKE +++ P + + +++ G +N G L + ++
Sbjct: 124 LMNCLFQLGKPDEANRVFKEIVLRDEVHPAT----YNIMINGLCKNGYVGNALSLFRNLQ 179
Query: 622 EGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGK 681
+ V +N +I+ CK R ++DA + LK G+ PNA T+ +++T
Sbjct: 180 RHGFVP-QVLTYNALINGLCKARRLKDARRVLKEFGETGNEPNAVTYTTVMTCCFRC-RL 237
Query: 682 YTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFIDKY 741
+ E E+ EM+S FD +V+ ++ G A E+V MM + D
Sbjct: 238 FEEGLEILSEMRSLG----FTFDGFAYCTVIAAMIKTGRMQEAEEIVEMMVSSGVRPDLV 293
Query: 742 KYRTLFLKYHK 752
Y TL Y +
Sbjct: 294 SYNTLINLYCR 304
Score = 44.7 bits (104), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 48/239 (20%), Positives = 85/239 (35%), Gaps = 44/239 (18%)
Query: 443 EHGILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGH--VITLCIS 500
HG + P Y L+ +A + K+ L KE + ++ A+ + V+T C
Sbjct: 180 RHGFV-PQVLTYNALINGLCKARRLKDARRVL----KEFGETGNEPNAVTYTTVMTCCFR 234
Query: 501 LGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASC 560
++ ++L EM G Y +++ A I+ R +E ++ S+G++ D
Sbjct: 235 CRLFEEGLEILSEMRSLGFTFDGFAYCTVIAAMIKTGRMQEAEEIVEMMVSSGVRPDLVS 294
Query: 561 YEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEV 620
Y L+ Q AL L E+
Sbjct: 295 YNTLINLYCRQGRLDDALRLLDEI------------------------------------ 318
Query: 621 KEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIG 679
EG+ ++C + ++ CK A++ L M SLG N F+ + G G
Sbjct: 319 -EGEGLECDQYTHTIIVDGLCKAGNFDGAQRHLNYMNSLGFGSNLVAFNCFLDGLGKAG 376
Score = 40.0 bits (92), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 44/207 (21%), Positives = 77/207 (37%), Gaps = 10/207 (4%)
Query: 475 IKAEKENLQVSHDDAALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYI 534
I +E +L + D A VI I G + +A ++++ M +GVR Y +L+ Y
Sbjct: 244 ILSEMRSLGFTFDGFAYCTVIAAMIKTGRMQEAEEIVEMMVSSGVRPDLVSYNTLINLYC 303
Query: 535 EANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGH 594
R + LL + G++ D + ++ + GA M S
Sbjct: 304 RQGRLDDALRLLDEIEGEGLECDQYTHTIIVDGLCKAGNFDGAQRHLNYMNSLGFG-SNL 362
Query: 595 QEFEMLVKGCAQNHEAGLMAKLLQ--EVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKA 652
F + G + +L + EVK+ + V+H C+ R A K
Sbjct: 363 VAFNCFLDGLGKAGHIDHALRLFEVMEVKDS-------FTYTIVVHNLCRARRFLCASKV 415
Query: 653 LKRMRSLGHLPNAQTFHSMVTGYAAIG 679
L G+ T +++ G +IG
Sbjct: 416 LVSCLKCGYQVLRATQRAVIVGLRSIG 442
>gi|414591641|tpg|DAA42212.1| TPA: hypothetical protein ZEAMMB73_141452 [Zea mays]
Length = 472
Score = 62.8 bits (151), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 104/236 (44%), Gaps = 10/236 (4%)
Query: 518 GVRASSSVYASLLKAYIEANRPRE-VTALLRDARSAGIQLDASCYEALLQSKIVQKDTPG 576
G+R + + + LLK + EA R E + LL G D Y LL+S Q +
Sbjct: 107 GLRVDAIIASHLLKGFCEAKRTDEALDILLHRTPELGCVPDVFSYNILLKSLCNQGKSGQ 166
Query: 577 ALHLFKEMKES-KIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQE-VKEGQRIDCGVHDWN 634
A +L + M E + + ++ G + + L +E V+ G D + +N
Sbjct: 167 ADNLLRMMAEGGTVCSPDVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPD--LVTYN 224
Query: 635 NVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEMKS 694
+V+H CK R M AE L++M + LPN T+++++ GY++ G++ E ++ EM+
Sbjct: 225 SVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSST-GQWKEAVRVFKEMRR 283
Query: 695 FASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFIDKYKYRTLFLKY 750
S+ D L ++ + + G A +V M D + Y + Y
Sbjct: 284 H----SILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGY 335
Score = 45.4 bits (106), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 79/365 (21%), Positives = 132/365 (36%), Gaps = 18/365 (4%)
Query: 420 AEVKRVLQTLLGMLQKQVELITTEHGILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEK 479
E KR + L +L + EL P Y L+K+ GK+ + + L +
Sbjct: 123 CEAKRTDEALDILLHRTPELGCV------PDVFSYNILLKSLCNQGKSGQADNLLRMMAE 176
Query: 480 ENLQVSHDDAALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRP 539
S D A VI G +++A DL EM G+ Y S++ A +A
Sbjct: 177 GGTVCSPDVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAM 236
Query: 540 REVTALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEM 599
+ A LR + + + Y L+ A+ +FKEM+ I M
Sbjct: 237 DKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSI-LPDVVTLSM 295
Query: 600 LVKGCAQNHEAGLMAKLLQEVK-EGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRS 658
L+ + + + + +GQ D V +N +++ + K + D M
Sbjct: 296 LMGSLCKYGKIKEARDVFDTMAMKGQNPD--VFSYNIMLNGYATKGCLVDMTDLFDLMLG 353
Query: 659 LGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRG 718
G P+ TF+ + YA G + ++ EM+ D +V+ R
Sbjct: 354 DGIAPDFYTFNVQIKAYANC-GMLDKAMIIFNEMRDHGVKP----DVVTYRTVIAALCRI 408
Query: 719 GFFARANEVVAMMEEGKMFIDKYKYRTLFLKY--HKTLYKGKTPKFQTEAQLKKREAALG 776
G A E M + + DKY Y L + H L K + F ++ +G
Sbjct: 409 GKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGILLKTQGIDFGNN-EIMALHLDIG 467
Query: 777 FKKWL 781
F +L
Sbjct: 468 FPSFL 472
>gi|357127910|ref|XP_003565620.1| PREDICTED: pentatricopeptide repeat-containing protein At5g57250,
mitochondrial-like [Brachypodium distachyon]
Length = 1088
Score = 62.8 bits (151), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 62/278 (22%), Positives = 108/278 (38%), Gaps = 41/278 (14%)
Query: 502 GWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCY 561
G +D+ LDEM +G + + Y SL+ + + NR + +++R G+ +D Y
Sbjct: 286 GSVDKVMGFLDEMERSGAKPNLITYTSLVGGFCKRNRLEDAFSVVRKLEQKGVVVDEYVY 345
Query: 562 EALLQSKIVQKDTPGALHLFKEMKESKIP--------------RSGHQE----------- 596
L+ S D A L EM+ I ++G
Sbjct: 346 SILIDSLCKMGDLDKAFCLLGEMEGKGIKAGTVTYNTVIDGLCKAGDTNNAIEISQGVAA 405
Query: 597 ----FEMLVKGCAQNHEA-GLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEK 651
+ ML+ GC + ++ G+MA ++ E I V N +I M DA
Sbjct: 406 DNFTYSMLLHGCIKGEDSTGIMA--IKSRLESSGIAVDVVTCNILIKALFMVNKMDDACS 463
Query: 652 ALKRMRSLGHLPNAQTFHSMVTGYAAIG--GKYTEVTELWGEMKSFASSTSMNFDEELLD 709
RMR +G PN T+H+++ +G G+ E+ + + + KS + + N
Sbjct: 464 LFHRMRDMGLSPNTVTYHTIINMMCKLGDIGRAVELFDEYKKDKSLSGTAVHNV------ 517
Query: 710 SVLYTFVRGGFFARANEVVAMMEEGKMFIDKYKYRTLF 747
++ GG A ++ + K+ D YR L
Sbjct: 518 -LIGALCNGGKVNIAEQIFYDLIHKKLRPDSCTYRKLI 554
>gi|224054488|ref|XP_002298285.1| predicted protein [Populus trichocarpa]
gi|222845543|gb|EEE83090.1| predicted protein [Populus trichocarpa]
Length = 575
Score = 62.8 bits (151), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 63/280 (22%), Positives = 128/280 (45%), Gaps = 15/280 (5%)
Query: 448 QPTEKIYIKLVKAFLEAGKTKELTH-FLIKAEKENLQVSHDDAALGHVITLCISLGWLDQ 506
+P+ Y ++K F+E K KE F KEN + D +I + G ++
Sbjct: 183 EPSALTYQIILKTFVEGNKFKEAEEVFETLLNKENSPLEPDQKMFHMMIYMQKKAGNYEK 242
Query: 507 AHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQ 566
A + M GV S+ Y SL+ E N +EV+ + + +G++ D Y L++
Sbjct: 243 ARKVFALMAERGVPQSTVTYNSLMS--FETNY-KEVSKIYDQMQRSGLRPDVVSYALLIK 299
Query: 567 SKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRI 626
+ + AL +F+EM ++ + R H+ + +L+ A +G++ + K +R
Sbjct: 300 AYGRARREEEALAVFEEMLDAGV-RPSHKAYNILLDAFAI---SGMVEQARVVFKSMRRD 355
Query: 627 DC--GVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTE 684
C + + ++ + M+ AE KR+R G PN T+ +++ G+A + +
Sbjct: 356 RCTPDLCSYTTMLSAYVNASDMEGAENFFKRLRQDGLKPNVVTYGALIKGHAKVNN-LEK 414
Query: 685 VTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARA 724
+ E++ EM+ S+ ++ +L +++ + + F A
Sbjct: 415 MMEIYEEMQ----LNSIKANQTILTTIMDAYGKNKDFGSA 450
>gi|297830278|ref|XP_002883021.1| hypothetical protein ARALYDRAFT_479138 [Arabidopsis lyrata subsp.
lyrata]
gi|297328861|gb|EFH59280.1| hypothetical protein ARALYDRAFT_479138 [Arabidopsis lyrata subsp.
lyrata]
Length = 504
Score = 62.8 bits (151), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 57/252 (22%), Positives = 107/252 (42%), Gaps = 15/252 (5%)
Query: 447 LQPTEKIYIKLVKAFLEAGK---TKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGW 503
+QP + L+ AF++ GK KEL +I+ + V D +I + G
Sbjct: 253 IQPNVITFTALIDAFVKVGKIMEAKELYKVMIQ-----MSVYPDVFTYTALINGLCTYGR 307
Query: 504 LDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEA 563
LD+A + M G + Y +L+ + ++ R + T + + G+ + Y
Sbjct: 308 LDEARQMFYLMESNGYYPNEVTYTTLIHGFCKSKRVEDGTKIFYEMSQKGLVANTITYTV 367
Query: 564 LLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEG 623
L+Q + A +F +M + P + + +L+ G N G + K L K
Sbjct: 368 LIQGYCLVGRPDVAQEVFNQMGSRRAP-PDIRTYNVLLDGLCYN---GYVEKALMIFKYM 423
Query: 624 QR--IDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGK 681
++ +D + + +I CK ++DA + S G PN T+ +M++G+ G
Sbjct: 424 RKREMDINIVTYTIIIQGMCKVGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGFI 483
Query: 682 YTEVTELWGEMK 693
+ E L+ +MK
Sbjct: 484 H-EADALFKKMK 494
Score = 59.7 bits (143), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 56/245 (22%), Positives = 100/245 (40%), Gaps = 11/245 (4%)
Query: 504 LDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEA 563
L+ A ++ ++M G+R + Y SL+ E R + LLRD GIQ + + A
Sbjct: 203 LNHAVEIFNQMGDNGIRPNVVTYNSLVSGLCEIGRWSDAAWLLRDMMKRGIQPNVITFTA 262
Query: 564 LLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNH--EAGLMAKLLQEVK 621
L+ + + A L+K M + + ++ C EA M L+
Sbjct: 263 LIDAFVKVGKIMEAKELYKVMIQMSVYPDVFTYTALINGLCTYGRLDEARQMFYLM---- 318
Query: 622 EGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGK 681
E + +IH FCK + ++D K M G + N T+ ++ GY + G+
Sbjct: 319 ESNGYYPNEVTYTTLIHGFCKSKRVEDGTKIFYEMSQKGLVANTITYTVLIQGYCLV-GR 377
Query: 682 YTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFIDKY 741
E++ +M S + + LLD + Y G+ +A + M + +M I+
Sbjct: 378 PDVAQEVFNQMGSRRAPPDIRTYNVLLDGLCYN----GYVEKALMIFKYMRKREMDINIV 433
Query: 742 KYRTL 746
Y +
Sbjct: 434 TYTII 438
Score = 44.3 bits (103), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 68/151 (45%), Gaps = 8/151 (5%)
Query: 597 FEMLVKG-CAQNHEAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKR 655
F L+ G C N +A Q V G R + V + +IH CK R + A + +
Sbjct: 155 FTSLLHGFCHWNRIEDALALFDQIVGMGFRPN--VVTYTTLIHCLCKNRHLNHAVEIFNQ 212
Query: 656 MRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTF 715
M G PN T++S+V+G I G++++ L +M ++ L+D+ F
Sbjct: 213 MGDNGIRPNVVTYNSLVSGLCEI-GRWSDAAWLLRDMMKRGIQPNVITFTALIDA----F 267
Query: 716 VRGGFFARANEVVAMMEEGKMFIDKYKYRTL 746
V+ G A E+ +M + ++ D + Y L
Sbjct: 268 VKVGKIMEAKELYKVMIQMSVYPDVFTYTAL 298
>gi|15241779|ref|NP_198189.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|9502152|gb|AAF88005.1| similar to a large family of Arabidopsis thaliana salt inducible
protein-like proteins; contains similarity to Pfam
family PF01535 (Domain of unknown function),
score=340.5, E=1.9e-98, N=2 [Arabidopsis thaliana]
gi|332006410|gb|AED93793.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 727
Score = 62.4 bits (150), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 72/328 (21%), Positives = 136/328 (41%), Gaps = 30/328 (9%)
Query: 449 PTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQAH 508
P Y L+ + AGK ++ KE + +D +V+T+ +G + + H
Sbjct: 404 PNAVTYNCLIDGYCRAGK--------LETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHH 455
Query: 509 DL------LDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYE 562
L +M GV+ + Y +L+ A + + AG DA Y
Sbjct: 456 GLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYY 515
Query: 563 ALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVK-GCAQNHEAGLMAKLLQEVK 621
AL+ + A+ + +++KE + ML+ C +N+ + L K
Sbjct: 516 ALISGLCQVRRDHDAIRVVEKLKEGGFSLD-LLAYNMLIGLFCDKNNAEKVYEMLTDMEK 574
Query: 622 EGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGK 681
EG++ D +N +I FF K + + E+ +++MR G P T+ +++ Y ++G
Sbjct: 575 EGKKPDSIT--YNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVG-- 630
Query: 682 YTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFIDKY 741
E+ E K + +N + + + ++ F + G F +A +++ EE KM + +
Sbjct: 631 --ELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQA---LSLKEEMKMKMVRP 685
Query: 742 KYRTLFLKYHKTLYKGKTPKFQTEAQLK 769
T + L+K K Q E LK
Sbjct: 686 NVET-----YNALFKCLNEKTQGETLLK 708
>gi|15233137|ref|NP_191711.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75183498|sp|Q9M316.1|PP292_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g61520, mitochondrial; Flags: Precursor
gi|6850843|emb|CAB71082.1| putative protein [Arabidopsis thaliana]
gi|332646696|gb|AEE80217.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 766
Score = 62.4 bits (150), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 72/328 (21%), Positives = 136/328 (41%), Gaps = 30/328 (9%)
Query: 449 PTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQAH 508
P Y L+ + AGK ++ KE + +D +V+T+ +G + + H
Sbjct: 404 PNAVTYNCLIDGYCRAGK--------LETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHH 455
Query: 509 DL------LDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYE 562
L +M GV+ + Y +L+ A + + AG DA Y
Sbjct: 456 GLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYY 515
Query: 563 ALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVK-GCAQNHEAGLMAKLLQEVK 621
AL+ + A+ + +++KE + ML+ C +N+ + L K
Sbjct: 516 ALISGLCQVRRDHDAIRVVEKLKEGGFSLD-LLAYNMLIGLFCDKNNTEKVYEMLTDMEK 574
Query: 622 EGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGK 681
EG++ D +N +I FF K + + E+ +++MR G P T+ +++ Y ++G
Sbjct: 575 EGKKPDSIT--YNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVG-- 630
Query: 682 YTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFIDKY 741
E+ E K + +N + + + ++ F + G F +A +++ EE KM + +
Sbjct: 631 --ELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQA---LSLKEEMKMKMVRP 685
Query: 742 KYRTLFLKYHKTLYKGKTPKFQTEAQLK 769
T + L+K K Q E LK
Sbjct: 686 NVET-----YNALFKCLNEKTQGETLLK 708
>gi|296087509|emb|CBI34098.3| unnamed protein product [Vitis vinifera]
Length = 718
Score = 62.4 bits (150), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 106/461 (22%), Positives = 189/461 (40%), Gaps = 45/461 (9%)
Query: 251 PNTNTFNIALAGCLLFETTRKAEQLLDIMPRIGVKADSNLLIIMAHIYERNGRREELRKL 310
P+ ++ + G + A +LL+ M G+K + + + Y GR EE R+L
Sbjct: 148 PSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSTLIMGYASEGRIEEARRL 207
Query: 311 QRHIDEAVNLSDIQFRQF-YNCLLSCHLKFGDLNSASKMVLEMLQRA-KEARNSLAAAML 368
+ ++ S + F YN ++SC K G + AS +LE+ R K + A +L
Sbjct: 208 L----DGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFIL 263
Query: 369 PFNAVGVNNRTPSEQNVNCTNSVDLENSGIIENH----ILSYEDFTKDRKFVALEAEVKR 424
++ G T + + + ++ + G++ N+ +L F AL + R
Sbjct: 264 GYSKTG--KMTEAAKYFD-----EMLDHGLMPNNPLYTVLINGHFKAGNLMEALS--IFR 314
Query: 425 VLQTLLGMLQKQVELITTEHGILQPTE-KIYIKLVKAFLEAGKTKE-------LTHFLIK 476
L L G+L HG+L+ + +K+ E G + ++ F +
Sbjct: 315 HLHAL-GVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQ 373
Query: 477 AEKENLQVSHDDAAL-----------GHVITLCISLGWLDQAHDLLDEMHLAGVRASSSV 525
E E HD+ L V LC S G + +A L D M G+ S
Sbjct: 374 GEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKS-GDIQRARKLFDGMPEKGLEPDSVT 432
Query: 526 YASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMK 585
Y++++ Y ++ E +L + S G+Q + Y AL+ + D A++LF+EM
Sbjct: 433 YSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREML 492
Query: 586 ESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRL 645
+ + F L+ G ++ + ++L QE+ Q + V + VI + CK
Sbjct: 493 QKGFATT--LSFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHV-TYTTVIDWHCKAGK 549
Query: 646 MQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVT 686
M++A K M+ + T ++ A G K EVT
Sbjct: 550 MEEANLLFKEMQERNLI--VDTVFALFEKMVAKGVKPDEVT 588
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 100/465 (21%), Positives = 188/465 (40%), Gaps = 29/465 (6%)
Query: 248 AMKPNTNTFNIALAGCLLFETTRKAEQLLDIMPRIGVKADSNLLIIMAHIYERNGRREEL 307
+ PNT T+ I AG + +A+ + M + G+K D N + + R G +E+
Sbjct: 5 GLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGDIDEV 64
Query: 308 RKLQRHIDEAVNLSDIQFRQFYNCLLSCHLKFGDLNSASKMVLEMLQRAKEARNSLAAAM 367
+++ D V+ YN L+ KFG + A++++ M+ + NS +
Sbjct: 65 LRIK---DVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKP-NSRTFCL 120
Query: 368 LPFNAVGVNNRTPSEQNVNCTNSVDLENS----GIIENHILSYEDFTKDRK------FVA 417
L +N + + ++ +L S G + N + +D + K F
Sbjct: 121 LIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSG 180
Query: 418 LEAEVKRVLQTLL------GMLQKQVELIT--TEHGILQPTEKIYIKLVKAFLEAGKTKE 469
L+ V V TL+ G +++ L+ + G+ P Y ++ +AGK +E
Sbjct: 181 LKPNV-VVYSTLIMGYASEGRIEEARRLLDGMSCSGV-APDIFCYNAIISCLSKAGKMEE 238
Query: 470 LTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASL 529
+ +L++ + L+ D G I G + +A DEM G+ ++ +Y L
Sbjct: 239 ASTYLLEIQGRGLK--PDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVL 296
Query: 530 LKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKI 589
+ + +A E ++ R + G+ D A + + AL +F E+KE +
Sbjct: 297 INGHFKAGNLMEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGL 356
Query: 590 PRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDA 649
+ L+ G + E +L E+ + I + +N ++ CK +Q A
Sbjct: 357 VPDVFT-YSSLISGFCKQGEVEKAFELHDEMCL-KGIAPNIFIYNALVDGLCKSGDIQRA 414
Query: 650 EKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEMKS 694
K M G P++ T+ +M+ GY E L+ EM S
Sbjct: 415 RKLFDGMPEKGLEPDSVTYSTMIDGYCK-SENVAEAFSLFHEMPS 458
>gi|224713520|gb|ACN62067.1| PPR-816 [Zea mays]
Length = 816
Score = 62.4 bits (150), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 106/236 (44%), Gaps = 10/236 (4%)
Query: 518 GVRASSSVYASLLKAYIEANRPRE-VTALLRDARSAGIQLDASCYEALLQSKIVQKDTPG 576
G+R + + + LLK + EA R E + LL G D Y LL+S Q +
Sbjct: 143 GLRVDAIIASHLLKGFCEAKRTDEALDILLHRTPELGCVPDVFSYNILLKSLCNQGKSGQ 202
Query: 577 ALHLFKEMKES-KIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQE-VKEGQRIDCGVHDWN 634
A L + M E + + ++ G + + L +E V+ G D + ++
Sbjct: 203 ADDLLRMMAEGGTVCSPDVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPD--LVTYS 260
Query: 635 NVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEMKS 694
+V+H CK R M AE L++M + G LP+ T+++++ GY++ G++ E ++ EM+
Sbjct: 261 SVVHALCKARAMDKAEAFLRQMVNKGVLPDNWTYNNLIYGYSST-GQWKEAVRVFKEMR- 318
Query: 695 FASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFIDKYKYRTLFLKY 750
S+ D L++++ + + G A +V M D + Y + Y
Sbjct: 319 ---RQSILPDVVALNTLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYTIMLNGY 371
Score = 48.5 bits (114), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 47/229 (20%), Positives = 94/229 (41%), Gaps = 10/229 (4%)
Query: 447 LQPTEKIYIKLVKAFLEAGKT-KELTHF--LIKAEKENLQVSHDDAALGHVITLCISLGW 503
L P +Y L+ + GK K L F ++ A E V + G ++ +G
Sbjct: 532 LHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGY-----GTLVNGYCKIGR 586
Query: 504 LDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEA 563
+D+ L EM G++ S+ +Y ++ EA R + +GI ++ Y
Sbjct: 587 IDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSI 646
Query: 564 LLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEG 623
+L+ + A+ LFKE++ + + ++ G Q L +
Sbjct: 647 VLRGLFKNRCFDEAIFLFKELRAMNV-KIDIITLNTMIAGMFQTRRVEEAKDLFASISRS 705
Query: 624 QRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMV 672
+ C V ++ +I K+ L+++AE M++ G P+++ + +V
Sbjct: 706 GLVPCAV-TYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPDSRLLNHVV 753
Score = 47.0 bits (110), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 80/351 (22%), Positives = 128/351 (36%), Gaps = 35/351 (9%)
Query: 420 AEVKRVLQTLLGMLQKQVELITTEHGILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEK 479
E KR + L +L + EL P Y L+K+ GK+ + L +
Sbjct: 159 CEAKRTDEALDILLHRTPELGCV------PDVFSYNILLKSLCNQGKSGQADDLLRMMAE 212
Query: 480 ENLQVSHDDAALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRP 539
S D A VI G +++A DL EM G+ Y+S++ A +A
Sbjct: 213 GGTVCSPDVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAM 272
Query: 540 REVTALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEM 599
+ A LR + G+ D Y L+ A+ +FKEM+ I
Sbjct: 273 DKAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSI---------- 322
Query: 600 LVKGCAQNHEAGLMAKL--LQEVKE--------GQRIDCGVHDWNNVIHFFCKKRLMQDA 649
L A N G + K ++E ++ GQ D V + +++ + K + D
Sbjct: 323 LPDVVALNTLMGSLCKYGKIKEARDVFDTMAMKGQNPD--VFSYTIMLNGYATKGCLVDM 380
Query: 650 EKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEMKSFASSTSMNFDEELLD 709
M G P TF+ ++ YA G + ++ EM+ +
Sbjct: 381 TDLFDLMLGDGIAPVICTFNVLIKAYANC-GMLDKAMIIFNEMRDHGVKPHV----VTYM 435
Query: 710 SVLYTFVRGGFFARANEVVAMMEEGKMFIDKYKYRTLFLKY--HKTLYKGK 758
+V+ R G A E M + + DKY Y L + H +L K K
Sbjct: 436 TVIAALCRIGKMDDAMEKFNQMIDQGVVPDKYAYHCLIQGFCTHGSLLKAK 486
Score = 43.9 bits (102), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 62/261 (23%), Positives = 103/261 (39%), Gaps = 33/261 (12%)
Query: 502 GWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCY 561
G LD+A + +EM GV+ Y +++ A + + G+ D Y
Sbjct: 410 GMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVVPDKYAY 469
Query: 562 EALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVK 621
L+Q T G+L KE+ S+I +G + +++ G N+ L + +
Sbjct: 470 HCLIQGFC----THGSLLKAKELI-SEIMNNGMR-LDIVFFGSIINNLCKLGRVMDAQNI 523
Query: 622 EGQRIDCGVHD----WNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAA 677
++ G+H +N ++ +C M+ A + M S G PN + ++V GY
Sbjct: 524 FDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCK 583
Query: 678 IGGKYTEVTELWGEM--KSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAM----- 730
I G+ E L+ EM K ST +LY + G F V A
Sbjct: 584 I-GRIDEGLSLFREMLQKGIKPST-----------ILYNIIIDGLFEAGRTVPAKVKFHE 631
Query: 731 MEEGKMFIDKYKY----RTLF 747
M E + ++K Y R LF
Sbjct: 632 MTESGIAMNKCTYSIVLRGLF 652
>gi|414591656|tpg|DAA42227.1| TPA: PPR-814a [Zea mays]
Length = 816
Score = 62.4 bits (150), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 106/236 (44%), Gaps = 10/236 (4%)
Query: 518 GVRASSSVYASLLKAYIEANRPRE-VTALLRDARSAGIQLDASCYEALLQSKIVQKDTPG 576
G+R + + + LLK + EA R E + LL G D Y LL+S Q +
Sbjct: 143 GLRVDAIIASHLLKGFCEAKRTDEALDILLHRTPELGCVPDVFSYNILLKSLCNQGKSGQ 202
Query: 577 ALHLFKEMKES-KIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQE-VKEGQRIDCGVHDWN 634
A L + M E + + ++ G + + L +E V+ G D + ++
Sbjct: 203 ADDLLRMMAEGGTVCSPDVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPD--LVTYS 260
Query: 635 NVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEMKS 694
+V+H CK R M AE L++M + G LP+ T+++++ GY++ G++ E ++ EM+
Sbjct: 261 SVVHALCKARAMDKAEAFLRQMVNKGVLPDNWTYNNLIYGYSST-GQWKEAVRVFKEMR- 318
Query: 695 FASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFIDKYKYRTLFLKY 750
S+ D L++++ + + G A +V M D + Y + Y
Sbjct: 319 ---RQSILPDVVALNTLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYTIMLNGY 371
Score = 49.3 bits (116), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 80/351 (22%), Positives = 129/351 (36%), Gaps = 35/351 (9%)
Query: 420 AEVKRVLQTLLGMLQKQVELITTEHGILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEK 479
E KR + L +L + EL P Y L+K+ GK+ + L +
Sbjct: 159 CEAKRTDEALDILLHRTPELGCV------PDVFSYNILLKSLCNQGKSGQADDLLRMMAE 212
Query: 480 ENLQVSHDDAALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRP 539
S D A VI G +++A DL EM G+ Y+S++ A +A
Sbjct: 213 GGTVCSPDVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAM 272
Query: 540 REVTALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEM 599
+ A LR + G+ D Y L+ A+ +FKEM+ I
Sbjct: 273 DKAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSI---------- 322
Query: 600 LVKGCAQNHEAGLMAKL--LQEVKE--------GQRIDCGVHDWNNVIHFFCKKRLMQDA 649
L A N G + K ++E ++ GQ D V + +++ + K + D
Sbjct: 323 LPDVVALNTLMGSLCKYGKIKEARDVFDTMAMKGQNPD--VFSYTIMLNGYATKGCLVDM 380
Query: 650 EKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEMKSFASSTSMNFDEELLD 709
M G P+ TF+ ++ YA G + ++ EM+ +
Sbjct: 381 TDLFDLMLGDGIAPDIYTFNVLIKAYANC-GMLDKAMIIFNEMRDHGVKPHV----VTYM 435
Query: 710 SVLYTFVRGGFFARANEVVAMMEEGKMFIDKYKYRTLFLKY--HKTLYKGK 758
+V+ R G A E M + + DKY Y L + H +L K K
Sbjct: 436 TVIAALCRIGKMDDAMEKFNQMIDQGVVPDKYAYHCLIQGFCTHGSLLKAK 486
Score = 48.5 bits (114), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 47/229 (20%), Positives = 94/229 (41%), Gaps = 10/229 (4%)
Query: 447 LQPTEKIYIKLVKAFLEAGKT-KELTHF--LIKAEKENLQVSHDDAALGHVITLCISLGW 503
L P +Y L+ + GK K L F ++ A E V + G ++ +G
Sbjct: 532 LHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGY-----GTLVNGYCKIGR 586
Query: 504 LDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEA 563
+D+ L EM G++ S+ +Y ++ EA R + +GI ++ Y
Sbjct: 587 IDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSI 646
Query: 564 LLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEG 623
+L+ + A+ LFKE++ + + ++ G Q L +
Sbjct: 647 VLRGLFKNRCFDEAIFLFKELRAMNV-KIDIITLNTMIAGMFQTRRVEEAKDLFASISRS 705
Query: 624 QRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMV 672
+ C V ++ +I K+ L+++AE M++ G P+++ + +V
Sbjct: 706 GLVPCAV-TYSIMITNLLKEGLVEEAEDMFSSMQNAGCEPDSRLLNHVV 753
Score = 45.8 bits (107), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 109/520 (20%), Positives = 192/520 (36%), Gaps = 63/520 (12%)
Query: 266 FETTRKAEQLLDIM----PRIGVKADSNLLIIMAHIYERNGRREELRKLQRHIDEAVNLS 321
F ++ ++ LDI+ P +G D I+ G+ + L R + E +
Sbjct: 158 FCEAKRTDEALDILLHRTPELGCVPDVFSYNILLKSLCNQGKSGQADDLLRMMAEGGTVC 217
Query: 322 DIQFRQFYNCLLSCHLKFGDLNSASKMVLEMLQRAKE----ARNSLAAAMLPFNAVGVNN 377
YN ++ K GD+N A + EM+QR +S+ A+ A+
Sbjct: 218 SPDVVA-YNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMDKAE 276
Query: 378 RTPSEQNVNCTNSVDLENSGIIENHILSYEDFTKDRKFVALEAEVKR--------VLQTL 429
+ N L ++ N I Y + ++ V + E++R L TL
Sbjct: 277 AFLRQM----VNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVALNTL 332
Query: 430 LGMLQKQVEL-------ITTEHGILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENL 482
+G L K ++ T P Y ++ + G ++T +
Sbjct: 333 MGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYTIMLNGYATKGCLVDMTDLFDLMLGDG- 391
Query: 483 QVSHDDAALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREV 542
++ D +I + G LD+A + +EM GV+ Y +++ A + +
Sbjct: 392 -IAPDIYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDA 450
Query: 543 TALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVK 602
G+ D Y L+Q T G+L KE+ S+I +G + +++
Sbjct: 451 MEKFNQMIDQGVVPDKYAYHCLIQGFC----THGSLLKAKELI-SEIMNNGMR-LDIVFF 504
Query: 603 GCAQNHEAGLMAKLLQEVKEGQRIDCGVHD----WNNVIHFFCKKRLMQDAEKALKRMRS 658
G N+ L + + ++ G+H +N ++ +C M+ A + M S
Sbjct: 505 GSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVS 564
Query: 659 LGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEM--KSFASSTSMNFDEELLDSVLYTFV 716
G PN + ++V GY I G+ E L+ EM K ST +LY +
Sbjct: 565 AGIEPNVVGYGTLVNGYCKI-GRIDEGLSLFREMLQKGIKPST-----------ILYNII 612
Query: 717 RGGFFARANEVVAM-----MEEGKMFIDKYKY----RTLF 747
G F V A M E + ++K Y R LF
Sbjct: 613 IDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIVLRGLF 652
>gi|302799124|ref|XP_002981321.1| hypothetical protein SELMODRAFT_114398 [Selaginella moellendorffii]
gi|300150861|gb|EFJ17509.1| hypothetical protein SELMODRAFT_114398 [Selaginella moellendorffii]
Length = 457
Score = 62.4 bits (150), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 86/190 (45%), Gaps = 5/190 (2%)
Query: 504 LDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEA 563
+D+A +LL+EM G + + Y SLL + + +E L G D Y
Sbjct: 103 VDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGKLKEAVDLFSRMVYRGCPPDGVVYNV 162
Query: 564 LLQSKIVQKDTPGALHLFKEMKESK-IPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKE 622
L+ + D A LF+EM E IP + L+ G ++ E G + L +++
Sbjct: 163 LIDGFSKKGDMGEAYRLFEEMLEKGCIPTV--FTYNSLLSGFSRKGEFGRVQSLFKDMLR 220
Query: 623 GQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKY 682
Q + +NN++ FCK M +A + MRSLG P+ ++++++ G + GK
Sbjct: 221 -QGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLGCPPDVVSYNTLIRGMCS-KGKP 278
Query: 683 TEVTELWGEM 692
E L EM
Sbjct: 279 HEAQRLLREM 288
>gi|224065693|ref|XP_002301924.1| predicted protein [Populus trichocarpa]
gi|222843650|gb|EEE81197.1| predicted protein [Populus trichocarpa]
Length = 709
Score = 62.4 bits (150), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 91/437 (20%), Positives = 167/437 (38%), Gaps = 57/437 (13%)
Query: 329 YNCLLSCHLKFGDLNSASKMVLEMLQRAKEARNSLAAAMLPFNAVGVNNRTPSEQNVNCT 388
YN L+S + D+ A ++ M R + L L ++ NNR
Sbjct: 202 YNALISACARNNDIEKALNLICRM--REDGYPSDLVNYSLIIRSLMKNNRA--------- 250
Query: 389 NSVDLENSGIIENHILSYEDFTKDRKFVALEAEVKRVLQTLLGM-----LQKQVELITTE 443
NS I++ Y + +D+ LE +V+ ++G L K +E +
Sbjct: 251 ------NSSILQK---IYREIDRDK----LEVDVQLWNDIIVGFAKAGDLDKALEFLGVV 297
Query: 444 HGI-LQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLG 502
G L + ++ G+T+E + LQ A ++ + G
Sbjct: 298 QGSGLSVKTATLVTVIWGLGNCGRTEEAEAIFEEMRDNGLQPRT--RAYNALLRGYVKAG 355
Query: 503 WLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYE 562
L A ++ EM +GV + Y+ L+ AY A R +L++ ++ +Q +A +
Sbjct: 356 LLRDAEFVVSEMERSGVLPNEQTYSLLIDAYGNAERWESARIVLKEMEASNVQPNAYVFS 415
Query: 563 ALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQ----NHEAGLMAKLLQ 618
+L S + + + +EM++S + R + +L+ + +H ++L
Sbjct: 416 RILASYRDKGEWQKTFQVLREMEDSGV-RPDRIFYNVLIDTFGKFNCLDHAMATFDRMLS 474
Query: 619 EVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAI 678
E E I WN ++ CK AE+ + M G+LP TF+ M+ +
Sbjct: 475 EGIEPDTIT-----WNTLVDCHCKAGKHDRAEELFEEMMEKGYLPCNTTFNIMINSFGD- 528
Query: 679 GGKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYT-----FVRGGFFARANEVVAMMEE 733
E W ++K+ T+M L ++V YT + + G F A E + M+
Sbjct: 529 -------QERWDDVKNLL--TNMRSQGLLPNAVTYTTLIDIYGKSGRFDDAIECLDDMKA 579
Query: 734 GKMFIDKYKYRTLFLKY 750
+ Y L Y
Sbjct: 580 AGLKPSSTMYNALLNAY 596
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 124/557 (22%), Positives = 214/557 (38%), Gaps = 60/557 (10%)
Query: 244 APLIAMKPNTN--TFNIALAGCLLFETTRKAEQLLDIMPRIGVKAD--SNLLIIMAHIYE 299
A L++ K N T+N ++ C KA L+ M G +D + LII + +
Sbjct: 188 AFLLSQKQNLTPLTYNALISACARNNDIEKALNLICRMREDGYPSDLVNYSLIIRSLMKN 247
Query: 300 RNGRREELRKLQRHIDEAVNLSDIQFRQFYNCLLSCHLKFGDLNSASKMVLEMLQRAKEA 359
L+K+ R ID D+Q +N ++ K GDL+ A LE L + +
Sbjct: 248 NRANSSILQKIYREIDRDKLEVDVQL---WNDIIVGFAKAGDLDKA----LEFLGVVQGS 300
Query: 360 RNSLAAAMLPFNAVGVNNRTPSEQNVNCTNSVDLENSGIIENHILSYEDFTKDRKFVALE 419
S+ A L G+ N +E E I E D + A
Sbjct: 301 GLSVKTATLVTVIWGLGNCGRTE-----------EAEAIFE----EMRDNGLQPRTRAYN 345
Query: 420 AEVKRVLQTLLGMLQKQVELITTE---HGILQPTEKIYIKLVKAFLEAGKTKELTHFLIK 476
A ++ ++ G+L + E + +E G+L P E+ Y L+ A+ A + + L +
Sbjct: 346 ALLRGYVKA--GLL-RDAEFVVSEMERSGVL-PNEQTYSLLIDAYGNAERWESARIVLKE 401
Query: 477 AEKENLQVSHDDAALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEA 536
E N+Q + ++ G + +L EM +GVR Y L+ + +
Sbjct: 402 MEASNVQ--PNAYVFSRILASYRDKGEWQKTFQVLREMEDSGVRPDRIFYNVLIDTFGKF 459
Query: 537 NRPREVTALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESK-IPRSGHQ 595
N A S GI+ D + L+ A LF+EM E +P +
Sbjct: 460 NCLDHAMATFDRMLSEGIEPDTITWNTLVDCHCKAGKHDRAEELFEEMMEKGYLP--CNT 517
Query: 596 EFEMLVKGCAQNHEAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKR 655
F +++ + LL ++ + V + +I + K DA + L
Sbjct: 518 TFNIMINSFGDQERWDDVKNLLTNMRSQGLLPNAVT-YTTLIDIYGKSGRFDDAIECLDD 576
Query: 656 MRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTF 715
M++ G P++ +++++ YA G V+ W M+ S+ L+S++ F
Sbjct: 577 MKAAGLKPSSTMYNALLNAYAQRGLSDQAVSAFWA-MRDDGLKPSL----LALNSLINAF 631
Query: 716 VRGGFFARANEVVAMMEEGKMFIDKYKYRTL---------FLK----YHKTLYKGKTPKF 762
+ A V+ M+E + D Y TL F K Y + + G TP
Sbjct: 632 GKDRRDVEAFVVLQYMKENDLKPDVVTYTTLMKALILVEKFDKVPSVYEEMILSGCTPDR 691
Query: 763 QTEAQLKKREAALGFKK 779
+ A L+ +AL + K
Sbjct: 692 KARAMLR---SALKYMK 705
>gi|224102855|ref|XP_002312829.1| predicted protein [Populus trichocarpa]
gi|222849237|gb|EEE86784.1| predicted protein [Populus trichocarpa]
Length = 734
Score = 62.4 bits (150), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 83/176 (47%), Gaps = 7/176 (3%)
Query: 504 LDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEA 563
L A +LD+M G + S ++Y ++ + R E L R G+ D Y
Sbjct: 470 LASAFGILDQMKEMGPKPSVAIYDCIIACLSQQRRISEAETLFHRMRRDGLDPDEVAYMT 529
Query: 564 LLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEG 623
++ + AL+LF++M E+ I S + + L+ G ++ L +KL+Q++K G
Sbjct: 530 MINAYARDGRGDKALNLFEKMIENAIQPSSYS-YTSLISGELKD----LASKLMQKIK-G 583
Query: 624 QRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIG 679
R ++ +N +I FC +MQDA K M+ G PNA TF ++ + G
Sbjct: 584 TRFMPYLYLYNIIIFGFCWANMMQDAHHQFKLMQKEGIHPNA-TFTILIGAHGRAG 638
>gi|359473390|ref|XP_002268680.2| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
mitochondrial-like [Vitis vinifera]
Length = 748
Score = 62.4 bits (150), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 54/246 (21%), Positives = 99/246 (40%), Gaps = 40/246 (16%)
Query: 447 LQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQ 506
L+P E Y L+ + + GK KE F + + + ++ + + G +D
Sbjct: 424 LEPDEVTYTALIDGYCKEGKMKE--AFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDT 481
Query: 507 AHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQ 566
A++LL EM G+ + Y SL+ +A + L++D AG DA Y L+
Sbjct: 482 ANELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMD 541
Query: 567 SKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRI 626
+ ++ A L ++M + ++ +
Sbjct: 542 AYCKSREMVRAHELLRQMLDRELQPT---------------------------------- 567
Query: 627 DCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVT 686
V +N +++ FC +++D EK LK M G +PNA T++S++ Y I T
Sbjct: 568 ---VVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQY-CIRNNMRATT 623
Query: 687 ELWGEM 692
E++ M
Sbjct: 624 EIYRGM 629
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 64/300 (21%), Positives = 119/300 (39%), Gaps = 9/300 (3%)
Query: 454 YIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQAHDLLDE 513
Y + + + G+ E L++ E D + VI +G L + L++E
Sbjct: 256 YNIITHSLCQLGRVVEAHQLLLQMELRG--CIPDVISYSTVINGYCQVGELQRVLKLIEE 313
Query: 514 MHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQKD 573
M + G++ + Y ++ + + E +LR+ S GI D Y L+ +
Sbjct: 314 MQIKGLKPNPYTYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLIDGFCKLGN 373
Query: 574 TPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRIDCGVHDW 633
A LF EM++ KI + ++ G Q KL E+ +R++ +
Sbjct: 374 VSSAYRLFDEMQKRKIS-PDFITYTAVICGLCQTGRVMEADKLFHEMV-CKRLEPDEVTY 431
Query: 634 NNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEMK 693
+I +CK+ M++A +M +G PN T+ ++ G G+ EL EM
Sbjct: 432 TALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKC-GEVDTANELLHEM- 489
Query: 694 SFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFIDKYKYRTLFLKYHKT 753
+ + +S++ + G +A +++ ME D Y TL Y K+
Sbjct: 490 ---CRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKS 546
>gi|302819136|ref|XP_002991239.1| hypothetical protein SELMODRAFT_448344 [Selaginella moellendorffii]
gi|300140950|gb|EFJ07667.1| hypothetical protein SELMODRAFT_448344 [Selaginella moellendorffii]
Length = 561
Score = 62.4 bits (150), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 67/303 (22%), Positives = 118/303 (38%), Gaps = 71/303 (23%)
Query: 399 IENHILSYEDFTKDRKFVALEAEVKRVLQT--------------------LLGMLQKQVE 438
IE + L E + + R F EA +R+L T L +Q+ +
Sbjct: 189 IEMYTLQIEGYGRRRSFDKAEAVFQRLLTTGPSPTAQTYQTMMKSYSEAGRLDDVQRIFK 248
Query: 439 LIT-TEHGILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVIT- 496
L+T + ++P ++Y ++ + + GK ++ ++E + ++ ++T
Sbjct: 249 LVTDSPSPTVKPDARMYNLMIHTYGKQGKVEQAMSVYQSMKRERVALT--------IVTF 300
Query: 497 ---LCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAG 553
L W D A D+ ++ A + Y +L+ AY +A R A D +AG
Sbjct: 301 NSLLACQKTWKD-AEDVFRKLQAAKLDPDVFSYTALVNAYAKARRAECAHAAFDDMIAAG 359
Query: 554 IQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLM 613
I+ Y AL+ + KD GA + K+MK++ GC
Sbjct: 360 IRPTQVAYNALINAYAKCKDPEGARAVLKQMKQN---------------GCTPT------ 398
Query: 614 AKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVT 673
V + ++I + LM AE+ + RM+ PN QTF ++T
Sbjct: 399 ----------------VESYTSLISAYVSVNLMAKAEQTVLRMKEADLQPNLQTFCVLMT 442
Query: 674 GYA 676
GYA
Sbjct: 443 GYA 445
>gi|356529489|ref|XP_003533323.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
mitochondrial-like [Glycine max]
Length = 550
Score = 62.4 bits (150), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 66/306 (21%), Positives = 116/306 (37%), Gaps = 9/306 (2%)
Query: 447 LQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQ 506
+ P Y L+ F G+ +E+T L N V+ + +I G L +
Sbjct: 249 IDPDVFTYTCLIHGFCGLGQWREVTRLLCDMVDRN--VNLNVYTYNILIDALCKKGMLGK 306
Query: 507 AHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQ 566
AHD+ + M G R + +L+ Y N E L GI D Y L+
Sbjct: 307 AHDMRNLMIERGQRPDLVTFNTLMSGYCLYNDVVEARKLFDTFAECGITPDVWSYNILII 366
Query: 567 SKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRI 626
AL LF +M K+ + + L+ G ++ +L + +G
Sbjct: 367 GYCKNNRIDEALSLFNKMNYKKLAPN-IVTYSSLIDGLCKSGRISYAWELFSAIHDGGP- 424
Query: 627 DCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVT 686
V +N ++ CK +L+ A + M G PN +++ ++ GY + E
Sbjct: 425 SPNVITYNIMLDALCKIQLVDKAIELFNLMFERGLTPNVSSYNILINGYCK-SKRIDEAM 483
Query: 687 ELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFIDKYKYRTL 746
L+ EM ++ D + ++ + G + A E+ +M +G +D Y L
Sbjct: 484 NLFEEMH----RRNLVPDSVTYNCLIDGLCKSGRISHAWELFNVMHDGGPPVDVITYNIL 539
Query: 747 FLKYHK 752
F + K
Sbjct: 540 FDAFSK 545
Score = 40.8 bits (94), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 49/247 (19%), Positives = 99/247 (40%), Gaps = 13/247 (5%)
Query: 507 AHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQ 566
A L +M L G+ S + L+ Y ++L G QL+A +++
Sbjct: 97 AISLSKQMGLRGITPSIVTLSILINCYCHLGHMGFAFSVLGMVLKRGYQLNAITLTTIMK 156
Query: 567 SKIVQKDTPGALHLFKEMKESKIPRS---GHQEFEMLVKGCAQNHEAGLMAKLLQEVKEG 623
+ + AL E +S + + + L+ G + +LL ++ EG
Sbjct: 157 GLCINGEVRKAL----EFHDSVVAQGFLLDEVTYGTLINGLCKIGLTREAFELLHKM-EG 211
Query: 624 QRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYT 683
Q + V +N ++ CK L+ +A + G P+ T+ ++ G+ + G++
Sbjct: 212 QVVRPNVVIYNMIVDGLCKDGLVTEARDLYSDVVGRGIDPDVFTYTCLIHGFCGL-GQWR 270
Query: 684 EVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFIDKYKY 743
EVT L +M ++N + + ++ + G +A+++ +M E D +
Sbjct: 271 EVTRLLCDM----VDRNVNLNVYTYNILIDALCKKGMLGKAHDMRNLMIERGQRPDLVTF 326
Query: 744 RTLFLKY 750
TL Y
Sbjct: 327 NTLMSGY 333
>gi|302792252|ref|XP_002977892.1| hypothetical protein SELMODRAFT_107734 [Selaginella moellendorffii]
gi|300154595|gb|EFJ21230.1| hypothetical protein SELMODRAFT_107734 [Selaginella moellendorffii]
Length = 500
Score = 62.4 bits (150), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 61/293 (20%), Positives = 116/293 (39%), Gaps = 21/293 (7%)
Query: 447 LQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQ 506
L P Y L+ + G+ E L K K+ + + +I+ +
Sbjct: 77 LTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKKCVPTA---VTYNSLISGLCKAERASE 133
Query: 507 AHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQ 566
A+DLL+EM +G Y +L+ + ++ + + + + G + D Y L+
Sbjct: 134 AYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTYSCLID 193
Query: 567 SKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKE-GQR 625
+ A+ LF M +S + L+ G + + LL+ + E G
Sbjct: 194 GLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAETGSS 253
Query: 626 IDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEV 685
D V + +++ FCK + DA L +M G P+ TF S++ G + ++
Sbjct: 254 PD--VVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCR-ENRLSDA 310
Query: 686 TELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFI 738
+ GEM+ + S ++ +LD + RAN+ +EE + F+
Sbjct: 311 VHILGEMRRKSCSPTVYTYNTILDG----------YCRANQ----LEEARKFM 349
Score = 59.3 bits (142), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 53/252 (21%), Positives = 103/252 (40%), Gaps = 9/252 (3%)
Query: 431 GMLQKQVELI--TTEHGILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDD 488
G L++ ++L + G P Y L+ F GK E + L + + S D
Sbjct: 199 GRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAETG--SSPDV 256
Query: 489 AALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRD 548
++ L LD A+DLL++M G+ + SL+ NR + +L +
Sbjct: 257 VTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRENRLSDAVHILGE 316
Query: 549 ARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNH 608
R Y +L A ++E P F ++++G + +
Sbjct: 317 MRRKSCSPTVYTYNTILDGYCRANQLEEARKFM--LEEMDCP-PNVVSFNIMIRGLCKVN 373
Query: 609 EAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRM-RSLGHLPNAQT 667
+ +L++E + +R + V + VI C+++ + +A + ++M G LPN+ T
Sbjct: 374 RSSEAMELVEEARR-RRCNPDVVMYTTVIDGLCREKKVDEACRVYRKMLEEPGCLPNSIT 432
Query: 668 FHSMVTGYAAIG 679
+ +++TG G
Sbjct: 433 YSTLITGLCNAG 444
Score = 48.9 bits (115), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 57/240 (23%), Positives = 94/240 (39%), Gaps = 17/240 (7%)
Query: 497 LCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQL 556
LC+ L +A L+EM + + Y L+ + R E ALL R +
Sbjct: 56 LCVE-NRLHEARKFLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKKCVPT 114
Query: 557 DASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKL 616
A Y +L+ + A L +EM S ++ C +
Sbjct: 115 -AVTYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVF 173
Query: 617 LQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRM-RSLGHLPNAQTFHSMVTGY 675
Q V G R D V ++ +I CK+ +++A RM +S +PN T++S+++G+
Sbjct: 174 EQLVARGFRPD--VVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGF 231
Query: 676 AAIGGKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGF--FARANEVVAMMEE 733
+ GK E L M SS D V YT + GF AR ++ ++ +
Sbjct: 232 CRM-GKMDEAMNLLERMAETGSSP---------DVVTYTTLMNGFCKLARLDDAYDLLNQ 281
>gi|302795346|ref|XP_002979436.1| hypothetical protein SELMODRAFT_177686 [Selaginella moellendorffii]
gi|300152684|gb|EFJ19325.1| hypothetical protein SELMODRAFT_177686 [Selaginella moellendorffii]
Length = 500
Score = 62.4 bits (150), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 61/293 (20%), Positives = 116/293 (39%), Gaps = 21/293 (7%)
Query: 447 LQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQ 506
L P Y L+ + G+ E L K K+ + + +I+ +
Sbjct: 77 LTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKKCVPTA---VTYNSLISGLCKAERASE 133
Query: 507 AHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQ 566
A+DLL+EM +G Y +L+ + ++ + + + + G + D Y L+
Sbjct: 134 AYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTYSCLID 193
Query: 567 SKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKE-GQR 625
+ A+ LF M +S + L+ G + + LL+ + E G
Sbjct: 194 GLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAETGSS 253
Query: 626 IDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEV 685
D V + +++ FCK + DA L +M G P+ TF S++ G + ++
Sbjct: 254 PD--VVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCR-ENRLSDA 310
Query: 686 TELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFI 738
+ GEM+ + S ++ +LD + RAN+ +EE + F+
Sbjct: 311 VHILGEMRRKSCSPTVYTYNTILDG----------YCRANQ----LEEARKFM 349
Score = 60.1 bits (144), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 54/252 (21%), Positives = 103/252 (40%), Gaps = 9/252 (3%)
Query: 431 GMLQKQVELI--TTEHGILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDD 488
G L++ ++L + G P Y L+ F GK E + L + + S D
Sbjct: 199 GRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAETG--SSPDV 256
Query: 489 AALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRD 548
++ L LD A+DLL++M G+ + SL+ NR + +L +
Sbjct: 257 VTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRENRLSDAVHILGE 316
Query: 549 ARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNH 608
R Y +L A ++E P F ++++G + +
Sbjct: 317 MRRKSCSPTVYTYNTILDGYCRANQLEEARKFM--LEEMDCP-PNVVSFNIMIRGLCKVN 373
Query: 609 EAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRM-RSLGHLPNAQT 667
+ +L++E + +R + V + VI C+++ + +A + ++M G LPN+ T
Sbjct: 374 RSSEAMELVEEARR-RRCNPDVVMYTTVIDGLCREKKVDEACRVYRKMLEEPGCLPNSIT 432
Query: 668 FHSMVTGYAAIG 679
+ ++VTG G
Sbjct: 433 YSTLVTGLCNAG 444
Score = 48.9 bits (115), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 57/240 (23%), Positives = 94/240 (39%), Gaps = 17/240 (7%)
Query: 497 LCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQL 556
LC+ L +A L+EM + + Y L+ + R E ALL R +
Sbjct: 56 LCVE-NRLHEARKFLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKKCVPT 114
Query: 557 DASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKL 616
A Y +L+ + A L +EM S ++ C +
Sbjct: 115 -AVTYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVF 173
Query: 617 LQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRM-RSLGHLPNAQTFHSMVTGY 675
Q V G R D V ++ +I CK+ +++A RM +S +PN T++S+++G+
Sbjct: 174 EQLVARGFRPD--VVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGF 231
Query: 676 AAIGGKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGF--FARANEVVAMMEE 733
+ GK E L M SS D V YT + GF AR ++ ++ +
Sbjct: 232 CRM-GKMDEAMNLLERMAETGSSP---------DVVTYTTLMNGFCKLARLDDAYDLLNQ 281
>gi|334182313|ref|NP_172058.2| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
gi|334182315|ref|NP_001154307.2| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
gi|122236365|sp|Q0WVK7.1|PPR12_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g05670, mitochondrial; Flags: Precursor
gi|110741796|dbj|BAE98841.1| hypothetical protein [Arabidopsis thaliana]
gi|332189752|gb|AEE27873.1| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
gi|332189753|gb|AEE27874.1| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
Length = 741
Score = 62.4 bits (150), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 110/513 (21%), Positives = 193/513 (37%), Gaps = 77/513 (15%)
Query: 251 PNTNTFNIALAGCLLFETTRKAEQLLDIMPRIGVKADSNLLIIMAHIYERNGRREELRKL 310
P+ +++ + G F K +L+++M R G+K +S I I R +L +
Sbjct: 279 PDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNS---YIYGSIIGLLCRICKLAEA 335
Query: 311 QRHIDEAVNLSDIQFRQFYNCLLSCHLKFGDLNSASKMVLEMLQRAKEARNSLAAAMLPF 370
+ E + + Y L+ K GD+ +ASK EM R
Sbjct: 336 EEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSR--------------- 380
Query: 371 NAVGVNNRTPSEQNVNCTNSVDLENSGIIENHILSYEDFTKDRKFVALEAEVKRVLQTLL 430
+ TP S + ++E L +E F K
Sbjct: 381 ------DITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKG------------------ 416
Query: 431 GMLQKQVELITTEHGILQPTEKIYIKLVKAFLEAGKTKE---LTHFLIKAEKENLQVSHD 487
L+P + +L+ + +AG K+ + + +I+A V++
Sbjct: 417 ----------------LEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYT 460
Query: 488 DAALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLR 547
G LC G LD A++LL EM G++ + Y S++ ++ E L+
Sbjct: 461 TLIDG----LCKE-GDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVG 515
Query: 548 DARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQN 607
+ +AG+ D Y L+ + + A + KEM K + F +L+ G +
Sbjct: 516 EFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEML-GKGLQPTIVTFNVLMNGFCLH 574
Query: 608 HEAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQT 667
KLL + + I +N+++ +C + ++ A K M S G P+ +T
Sbjct: 575 GMLEDGEKLLNWML-AKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKT 633
Query: 668 FHSMVTGYAAIGGKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEV 727
+ ++V G+ E L+ EMK S S++ L+ F++ F A EV
Sbjct: 634 YENLVKGHCK-ARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKG----FLKRKKFLEAREV 688
Query: 728 VAMMEEGKMFIDKYKYRTLFLKYHKTLYKGKTP 760
M + DK +F + T YKGK P
Sbjct: 689 FDQMRREGLAADK----EIFDFFSDTKYKGKRP 717
Score = 53.5 bits (127), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 64/292 (21%), Positives = 110/292 (37%), Gaps = 11/292 (3%)
Query: 463 EAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQAHDLLDEMHLAGVRAS 522
+ G+ KE H L+ E + + D + V+ G LD+ L++ M G++ +
Sbjct: 258 QLGRIKEAHHLLLLMELKGY--TPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPN 315
Query: 523 SSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFK 582
S +Y S++ + E + GI D Y L+ + D A F
Sbjct: 316 SYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFY 375
Query: 583 EMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEV-KEGQRIDCGVHDWNNVIHFFC 641
EM I + ++ G Q + KL E+ +G D + +I+ +C
Sbjct: 376 EMHSRDIT-PDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVT--FTELINGYC 432
Query: 642 KKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEMKSFASSTSM 701
K M+DA + M G PN T+ +++ G G EL EM ++
Sbjct: 433 KAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCK-EGDLDSANELLHEMWKIGLQPNI 491
Query: 702 NFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFIDKYKYRTLFLKYHKT 753
+S++ + G A ++V E + D Y TL Y K+
Sbjct: 492 F----TYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKS 539
>gi|242048026|ref|XP_002461759.1| hypothetical protein SORBIDRAFT_02g007610 [Sorghum bicolor]
gi|241925136|gb|EER98280.1| hypothetical protein SORBIDRAFT_02g007610 [Sorghum bicolor]
Length = 896
Score = 62.4 bits (150), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/255 (23%), Positives = 121/255 (47%), Gaps = 14/255 (5%)
Query: 444 HGILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGW 503
+G L P + Y L+ +AG+ +E + +++ + D A V+ G
Sbjct: 560 YGFL-PDVRSYSILIHGLTKAGQARETSSIFHAMKQQGFAL--DARAYNAVVDGFCKSGK 616
Query: 504 LDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEA 563
LD+A+++L+EM + V + + Y S++ + +R E L +A+S GI+L+ Y +
Sbjct: 617 LDKAYEVLEEMKVKRVPPTVATYGSIIDGLAKIDRLDEAYMLFEEAKSKGIELNVIVYSS 676
Query: 564 LLQ--SKIVQKDTPGALHLFKEMKESKIPR--SGHQEFEMLVKGCAQNHEAGLMAKLLQE 619
L+ K+ + D L L + MK+ P + + + LVK + +EA + + ++E
Sbjct: 677 LIDGFGKVGRIDE-AYLILEEMMKKGLTPNVYTWNSLMDALVKA-EEINEALICFQSMKE 734
Query: 620 VKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIG 679
+K + ++ +I+ C+ + A + M+ G +PN T+ +M+ G A +
Sbjct: 735 MK----CSPNTYTYSILINGLCRVQKYNKAFVFWQEMQKQGLVPNVVTYTTMIAGLAKV- 789
Query: 680 GKYTEVTELWGEMKS 694
G T+ L+ K+
Sbjct: 790 GNITDACSLFERFKA 804
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/223 (21%), Positives = 102/223 (45%), Gaps = 4/223 (1%)
Query: 452 KIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQAHDLL 511
+ Y +V F ++GK + L E + +V A G +I + LD+A+ L
Sbjct: 602 RAYNAVVDGFCKSGKLDKAYEVL--EEMKVKRVPPTVATYGSIIDGLAKIDRLDEAYMLF 659
Query: 512 DEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQ 571
+E G+ + VY+SL+ + + R E +L + G+ + + +L+ + +
Sbjct: 660 EEAKSKGIELNVIVYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLMDALVKA 719
Query: 572 KDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRIDCGVH 631
++ AL F+ MKE K + + + +L+ G + + QE+++ Q + V
Sbjct: 720 EEINEALICFQSMKEMKCSPNTYT-YSILINGLCRVQKYNKAFVFWQEMQK-QGLVPNVV 777
Query: 632 DWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTG 674
+ +I K + DA +R ++ G P+A +F++++ G
Sbjct: 778 TYTTMIAGLAKVGNITDACSLFERFKANGGTPDAASFNALIEG 820
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 50/229 (21%), Positives = 98/229 (42%), Gaps = 8/229 (3%)
Query: 470 LTHFLIKAEK--ENLQV---SHDDAALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSS 524
L+H L EK E + V + A +++ + LD A ++ M R + S
Sbjct: 124 LSHDLAAMEKVLEEMSVLGYGVPNPACADLVSALVRTRRLDDAERVIAAMRRLKFRPAFS 183
Query: 525 VYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEM 584
Y L+ A EA +P LLR + G ++ + L+++ + GAL L E+
Sbjct: 184 AYTVLIGAMAEARQPERALELLRQMQEVGYEVGVPLFTTLVRALAREGRVEGALALVDEV 243
Query: 585 KESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKR 644
K S + + + + + + K E+K Q + + ++I CK
Sbjct: 244 KGSCL-EPDIVLYNVCIDCFGKAGNVDMAWKFFHELKS-QGLKPDDVSYTSMIWVLCKAG 301
Query: 645 LMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEMK 693
+ +AE+ +M + +P A +++M+ GY + G++ +L ++K
Sbjct: 302 RLSEAEELFGQMETERAVPCAYAYNTMIMGYGS-AGQFENAYKLLDQLK 349
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 48/221 (21%), Positives = 97/221 (43%), Gaps = 6/221 (2%)
Query: 453 IYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCI-SLGWLDQAHDLL 511
+Y L++ F G+ KE H + K + N + D L + C+ G +++ +
Sbjct: 498 VYTSLIRNFFMHGR-KEDGHKIFK--EMNRRGCQPDLTLLNTYMDCVFKAGDVEKGRAIF 554
Query: 512 DEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQ 571
+++ G Y+ L+ +A + RE +++ + G LDA Y A++
Sbjct: 555 EDIKGYGFLPDVRSYSILIHGLTKAGQARETSSIFHAMKQQGFALDARAYNAVVDGFCKS 614
Query: 572 KDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRIDCGVH 631
A + +EMK ++P + + ++ G A+ L +E K + I+ V
Sbjct: 615 GKLDKAYEVLEEMKVKRVPPT-VATYGSIIDGLAKIDRLDEAYMLFEEAKS-KGIELNVI 672
Query: 632 DWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMV 672
++++I F K + +A L+ M G PN T++S++
Sbjct: 673 VYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLM 713
Score = 42.0 bits (97), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 49/250 (19%), Positives = 97/250 (38%), Gaps = 6/250 (2%)
Query: 431 GMLQKQVELITTEHG-ILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDA 489
G ++ + L+ G L+P +Y + F +AG F + + + L+ DD
Sbjct: 231 GRVEGALALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMAWKFFHELKSQGLK--PDDV 288
Query: 490 ALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDA 549
+ +I + G L +A +L +M + Y +++ Y A + LL
Sbjct: 289 SYTSMIWVLCKAGRLSEAEELFGQMETERAVPCAYAYNTMIMGYGSAGQFENAYKLLDQL 348
Query: 550 RSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHE 609
+ G + ++L ++ AL LF+ MK+ P S + + A E
Sbjct: 349 KERGCIPSVVSFNSILTCLGKKRKVDEALTLFEAMKKDAEPNSSTYNIIIDMLCMAGKVE 408
Query: 610 AGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFH 669
M +++ E + + N ++ CK + + A + + G PN+ T+
Sbjct: 409 EAYM---IRDEMEHAGLFPNLLTVNIMVDRLCKAKKFEPAYEMFETASQRGCNPNSVTYC 465
Query: 670 SMVTGYAAIG 679
S++ G G
Sbjct: 466 SLIDGLGKKG 475
>gi|356540307|ref|XP_003538631.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g02860-like [Glycine max]
Length = 804
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/301 (19%), Positives = 122/301 (40%), Gaps = 40/301 (13%)
Query: 484 VSHDDAALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVT 543
V+ D +I+ C ++A L +M L G Y +LL + ++ RP+E
Sbjct: 260 VAPDLYTYNTLISCCRRGSLYEEAVHLFQQMKLEGFTPDKVTYNALLDVFGKSRRPQEAM 319
Query: 544 ALLRDARSAGIQLDASCYEAL---------------LQSKIVQKDTPGALHLFKEMKESK 588
+L++ + G + Y +L L++++V K + + + S
Sbjct: 320 KVLQEMEANGFSPTSVTYNSLISAYAKGGLLEEALDLKTQMVHKGIKPDVFTYTTLL-SG 378
Query: 589 IPRSGHQEF------EMLVKGCAQN-----------HEAGLMAKLLQEVKEGQRIDCG-- 629
++G +F EM GC N G A++++ + + +C
Sbjct: 379 FEKAGKDDFAIQVFLEMRAVGCKPNICTFNALIKMHGNRGKFAEMMKVFDDIKLCNCSPD 438
Query: 630 VHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELW 689
+ WN ++ F + + K M+ G + TF+++++ Y+ G + + ++
Sbjct: 439 IVTWNTLLAVFGQNGMDSQVSGIFKEMKRAGFVAERDTFNTLISAYSRCGS-FDQAMAVY 497
Query: 690 GEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFIDKYKYRTLFLK 749
M + D ++VL RGG + ++ +V+A ME+G+ ++ Y +L
Sbjct: 498 KSMLE----AGVVPDLSTYNAVLAALARGGLWEQSEKVLAEMEDGRCKPNELSYSSLLHA 553
Query: 750 Y 750
Y
Sbjct: 554 Y 554
Score = 47.0 bits (110), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 57/279 (20%), Positives = 104/279 (37%), Gaps = 32/279 (11%)
Query: 502 GWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCY 561
G Q + EM AG A + +L+ AY + A+ + AG+ D S Y
Sbjct: 453 GMDSQVSGIFKEMKRAGFVAERDTFNTLISAYSRCGSFDQAMAVYKSMLEAGVVPDLSTY 512
Query: 562 EALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVK 621
A+L + + + EM++ + + + L+ A E M +E+
Sbjct: 513 NAVLAALARGGLWEQSEKVLAEMEDGRC-KPNELSYSSLLHAYANGKEIERMNAFAEEIY 571
Query: 622 EGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYA--AIG 679
G ++ ++ K L+ + E+A +R G P+ T ++M++ Y +
Sbjct: 572 SGS-VETHAVLLKTLVLVNSKSDLLIETERAFLELRRRGISPDITTLNAMLSIYGRKQMV 630
Query: 680 GKYTEVTELWGEMKSFAS-----------STSMNF--DEELL---------------DSV 711
K E+ E + S S S NF EE+L ++V
Sbjct: 631 AKAHEILNFMHETRFTPSLTTYNSLMYMYSRSENFQKSEEILREVLEKGMKPDRISYNTV 690
Query: 712 LYTFVRGGFFARANEVVAMMEEGKMFIDKYKYRTLFLKY 750
+Y + R G A+ + + M++ + D Y T Y
Sbjct: 691 IYAYCRNGRMKEASRIFSEMKDSALVPDVVTYNTFIATY 729
Score = 46.6 bits (109), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 54/237 (22%), Positives = 93/237 (39%), Gaps = 41/237 (17%)
Query: 457 LVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQAHDLLDEMHL 516
++K +AG+ L+ + + + + D A +I S G A +L ++M
Sbjct: 164 IIKILGKAGRVSSAASLLLALQNDGVHI--DVYAYTCLINAYSSSGRYRDAVNLFNKMQQ 221
Query: 517 AGVRASSSVYASLLKAYIEANRP-REVTALLRDARSAGIQLDASCYEALLQSKIVQKDTP 575
G + Y +L Y + P VTAL+ RS G+ D Y L+
Sbjct: 222 DGCNPTLITYNVVLNVYGKMGMPWSNVTALVEAMRSRGVAPDLYTYNTLISCCRRGSLYE 281
Query: 576 GALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRIDCGVHDWNN 635
A+HLF++MK ++G + +N
Sbjct: 282 EAVHLFQQMK---------------LEGFTPDKVT----------------------YNA 304
Query: 636 VIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEM 692
++ F K R Q+A K L+ M + G P + T++S+++ YA GG E +L +M
Sbjct: 305 LLDVFGKSRRPQEAMKVLQEMEANGFSPTSVTYNSLISAYAK-GGLLEEALDLKTQM 360
Score = 45.1 bits (105), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 111/556 (19%), Positives = 218/556 (39%), Gaps = 106/556 (19%)
Query: 115 QHMQMDGF-PRKTLVNKILTSFVESLDSKWLEKAYGLVEQAFEEGKQIL---LEKEPLIY 170
Q M+ +GF P N +++++ + GL+E+A + Q++ ++ + Y
Sbjct: 323 QEMEANGFSPTSVTYNSLISAYAKG----------GLLEEALDLKTQMVHKGIKPDVFTY 372
Query: 171 LSL--GLSKCGLPVPASTILRKLVATEQYPPVTAWSAILAHMSLTAPGAYLAAELILEIG 228
+L G K G A + ++ A P + ++A++ A E+
Sbjct: 373 TTLLSGFEKAGKDDFAIQVFLEMRAVGCKPNICTFNALIKMHGNRGKFA--------EMM 424
Query: 229 YLFQDGRVDPRKKCNAPLIAMKPNTNTFNIALAGCLLFETTRKAEQLLDI---MPRIGVK 285
+F D ++ CN P+ T+N LA +F Q+ I M R G
Sbjct: 425 KVFDDIKL-----CNC-----SPDIVTWNTLLA---VFGQNGMDSQVSGIFKEMKRAGFV 471
Query: 286 ADSNLLIIMAHIYERNGRREELRKLQRHIDEAVNLSDIQFRQFYNCLLSCHLKFGDLNSA 345
A+ + + Y R G ++ + + + EA + D+ YN +L+ L G L
Sbjct: 472 AERDTFNTLISAYSRCGSFDQAMAVYKSMLEAGVVPDLST---YNAVLAA-LARGGLWEQ 527
Query: 346 SKMVLEMLQRAKEARNSLA-AAMLPFNAVGVNNRTPSEQNVNCTNSVDLE-NSGIIENHI 403
S+ VL ++ + N L+ +++L A G + + N+ E SG +E H
Sbjct: 528 SEKVLAEMEDGRCKPNELSYSSLLHAYANG--------KEIERMNAFAEEIYSGSVETHA 579
Query: 404 LSYEDFTKDRKFVALEAEVKRVLQTLLGMLQKQVELITTEHGILQPTEKIYIKLVKAFLE 463
+ +L+TL+ + K LI TE +AFLE
Sbjct: 580 V--------------------LLKTLVLVNSKSDLLIETE---------------RAFLE 604
Query: 464 AGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQAHDLLDEMHLAGVRASS 523
+ +S D L ++++ + +AH++L+ MH S
Sbjct: 605 LRRRG---------------ISPDITTLNAMLSIYGRKQMVAKAHEILNFMHETRFTPSL 649
Query: 524 SVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKE 583
+ Y SL+ Y + ++ +LR+ G++ D Y ++ + A +F E
Sbjct: 650 TTYNSLMYMYSRSENFQKSEEILREVLEKGMKPDRISYNTVIYAYCRNGRMKEASRIFSE 709
Query: 584 MKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKK 643
MK+S + + A + A + + +K+G + D + +N+++ ++CK
Sbjct: 710 MKDSALVPDVVTYNTFIATYAADSMFAEAIDVVRYMIKQGCKPD--QNTYNSIVDWYCKL 767
Query: 644 RLMQDAEKALKRMRSL 659
+A +K + +L
Sbjct: 768 DQRHEANSFVKNLSNL 783
>gi|298715105|emb|CBJ27793.1| pentatricopeptide repeat-containing protein, putative [Ectocarpus
siliculosus]
Length = 614
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/187 (21%), Positives = 84/187 (44%), Gaps = 4/187 (2%)
Query: 490 ALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANR--PREVTALLR 547
A +I+ C S ++A D+M AGV +AS++ + + P ++
Sbjct: 173 AYNALISGCASGRGYERALGYFDDMRKAGVEPDEMTFASIIATIRDGSEGSPERAIEAVQ 232
Query: 548 DARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQN 607
+ AG++ D C +++ + + AL +F+EMK IPR + + C +
Sbjct: 233 MMKEAGLRPDTYCMNSVMAVNVQARQPNAALKIFEEMKRDDIPRDV-VSYNTAISACDKL 291
Query: 608 HEAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQT 667
+A +LL++ +E ++ V +N I Q+A + + M G P+ T
Sbjct: 292 QDAETAVRLLRQAREDD-VEPDVFSYNTAISALGHSCQWQEAARIFEEMNEAGVAPSLMT 350
Query: 668 FHSMVTG 674
++++++G
Sbjct: 351 YNTLISG 357
Score = 44.7 bits (104), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 57/118 (48%), Gaps = 8/118 (6%)
Query: 489 AALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRD 548
+ALGH S W + A + +EM+ AGV S Y +L+ + A P E ++
Sbjct: 321 SALGH------SCQWQEAAR-IFEEMNEAGVAPSLMTYNTLISGCVRAQAPSEALSVFYL 373
Query: 549 ARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQ 606
+ GI+ D + L + + +D A++L +EM + +P + Q + ++ CA+
Sbjct: 374 MKERGIKRDQYSFAGALHASVHLRDYELAMNLLEEMIDMGMP-ANSQSYATAIRTCAR 430
>gi|326527027|dbj|BAK04455.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 860
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 83/180 (46%), Gaps = 6/180 (3%)
Query: 518 GVRASSSVYASLLKAYIEANRPRE-VTALLRDARSAGIQLDASCYEALLQSKIVQKDTPG 576
G++ ++LLK ANR E V LL G + Y +L+ +
Sbjct: 187 GLKIHQITASTLLKCLCYANRTEEAVNVLLHRMSELGCVPNVFSYSIILKGLCDNSMSQR 246
Query: 577 ALHLFKEM-KESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEV-KEGQRIDCGVHDWN 634
AL LF+ M KE + ++ G + E G L E+ ++G + D V +N
Sbjct: 247 ALDLFQMMAKEGGACSPNVVAYNTVIHGFFKEGETGKACSLFHEMTRQGVKPD--VVTYN 304
Query: 635 NVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEMKS 694
+I CK R M AE L++M + G P+ T++ M+ GYA + G+ E +++ +MKS
Sbjct: 305 LIIDALCKARAMDKAELVLRQMTTNGAQPDTVTYNCMIHGYATL-GRLKEAAKMFRKMKS 363
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 56/261 (21%), Positives = 109/261 (41%), Gaps = 15/261 (5%)
Query: 501 LGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASC 560
+G +D+A +LD M + GV Y++LL Y + R + L R+ + G++ +
Sbjct: 594 VGKMDKAFKILDAMEVVGVETDIVTYSTLLDGYFKNGRINDGLTLFREMQRKGVKPNTVT 653
Query: 561 YEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEV 620
Y +L T A F EM ES + + +++ G +N+ A L Q++
Sbjct: 654 YGIMLAGLFRAGRTVAARKKFHEMIESGTTVT-VSIYGIILGGLCRNNCADEAIILFQKL 712
Query: 621 KEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGG 680
+ + N +I+ K + ++A++ + + G LPN T+ M+ G
Sbjct: 713 GT-MNVKFSITILNTMINAMYKVQRKEEAKELFATISASGLLPNESTYGVMIINLLKDGA 771
Query: 681 KYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFIDK 740
E M S + + LL+ ++ + G A+A ++ + +GK + +
Sbjct: 772 -----VEDANNMFSSMEKSGIVPGSRLLNRIIRMLLEKGEIAKAGNYLSKV-DGKRILLE 825
Query: 741 YKYRTLFL-------KYHKTL 754
+L L KYH+ +
Sbjct: 826 ASTTSLMLSLFSRKGKYHEDM 846
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 68/322 (21%), Positives = 123/322 (38%), Gaps = 48/322 (14%)
Query: 448 QPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQA 507
QP Y ++ + G+ KE K + L + + + +LC G +A
Sbjct: 332 QPDTVTYNCMIHGYATLGRLKEAAKMFRKMKSRGL-IPNIVICNSFLASLC-KHGRSKEA 389
Query: 508 HDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQS 567
++ D M G + Y +LL Y ++ L +S GI D + L+ +
Sbjct: 390 AEIFDSMTAKGHKPDIVSYCTLLHGYASEGWFADMIGLFNSMKSNGIAADCRVFNILIHA 449
Query: 568 KIVQKDTPGALHLFKEMKE--------------SKIPRSGH-----QEF-EMLVKGCAQN 607
+ A+ +F EM++ S R G ++F +M+ +G N
Sbjct: 450 YAKRGMVDDAMLIFTEMQQQGVSPDVVTYSTVISAFSRMGRLTDAMEKFNQMVARGIQPN 509
Query: 608 H-------EAGLMAKLLQEVKE--GQRIDCGVHD-----WNNVIHFFCKKRLMQDAEKAL 653
+ M L + KE + I+ G+ +N+VI+ CK + DA
Sbjct: 510 TAVYHSIIQGFCMHGGLVKAKELVSEMINKGIPRPDIVFFNSVINSLCKDGRVMDAHDIF 569
Query: 654 KRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEMKSFASSTSMNFDEELLDSVLY 713
+ +G P+ TF S++ GY + GK + ++ M+ T D V Y
Sbjct: 570 DLVTDIGERPDVITFTSLIDGYCLV-GKMDKAFKILDAMEVVGVET---------DIVTY 619
Query: 714 TFVRGGFF--ARANEVVAMMEE 733
+ + G+F R N+ + + E
Sbjct: 620 STLLDGYFKNGRINDGLTLFRE 641
Score = 39.7 bits (91), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 51/274 (18%), Positives = 100/274 (36%), Gaps = 42/274 (15%)
Query: 479 KENLQVSHDDAALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANR 538
KE S + A VI G +A L EM GV+ Y ++ A +A
Sbjct: 256 KEGGACSPNVVAYNTVIHGFFKEGETGKACSLFHEMTRQGVKPDVVTYNLIIDALCKARA 315
Query: 539 PREVTALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFE 598
+ +LR + G Q D Y ++ A +F++MK
Sbjct: 316 MDKAELVLRQMTTNGAQPDTVTYNCMIHGYATLGRLKEAAKMFRKMKSR----------- 364
Query: 599 MLVKGCAQNHEAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRS 658
GL+ ++ N+ + CK ++A + M +
Sbjct: 365 ------------GLIPNIVI--------------CNSFLASLCKHGRSKEAAEIFDSMTA 398
Query: 659 LGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRG 718
GH P+ ++ +++ GYA+ G + ++ L+ MK S + D + + +++ + +
Sbjct: 399 KGHKPDIVSYCTLLHGYAS-EGWFADMIGLFNSMK----SNGIAADCRVFNILIHAYAKR 453
Query: 719 GFFARANEVVAMMEEGKMFIDKYKYRTLFLKYHK 752
G A + M++ + D Y T+ + +
Sbjct: 454 GMVDDAMLIFTEMQQQGVSPDVVTYSTVISAFSR 487
>gi|414591138|tpg|DAA41709.1| TPA: hypothetical protein ZEAMMB73_028111 [Zea mays]
Length = 583
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 62/251 (24%), Positives = 100/251 (39%), Gaps = 45/251 (17%)
Query: 497 LCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQL 556
LC S G +D A LLD+M GV ++ Y SLL Y+ V +L + GI+
Sbjct: 187 LCKS-GRVDDARRLLDDMPRHGVSLNALCYNSLLDCYVRQKDDGRVQEILEIMENEGIEA 245
Query: 557 DASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKL 616
Y L+ S +D LF EMK N+ G
Sbjct: 246 TVGTYTILVDSLSTARDISKVEALFNEMK--------------------ANNVVG----- 280
Query: 617 LQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYA 676
V+ + VI+ +C+ M+ A K L G PN +T+ ++ G+
Sbjct: 281 ------------DVYLYTAVINAYCRAGNMRRAAKVLDECVGNGVEPNERTYGVLINGFC 328
Query: 677 AIGGKYTEVTE-LWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGK 735
IG E E L +M+ + ++ + ++++ + R G A ++ A ME+
Sbjct: 329 KIG--QMEAAEMLLADMQ----GQGVGLNQIIFNTMIDGYCRKGMVDDALKIKAAMEKMG 382
Query: 736 MFIDKYKYRTL 746
+ +D Y Y TL
Sbjct: 383 VELDIYTYNTL 393
Score = 44.7 bits (104), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 53/247 (21%), Positives = 97/247 (39%), Gaps = 7/247 (2%)
Query: 447 LQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQ 506
++P E+ Y L+ F + G+ + L A+ + V + +I G +D
Sbjct: 313 VEPNERTYGVLINGFCKIGQMEAAEMLL--ADMQGQGVGLNQIIFNTMIDGYCRKGMVDD 370
Query: 507 AHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQ 566
A + M GV Y +L NR E LL G+ + Y L+
Sbjct: 371 ALKIKAAMEKMGVELDIYTYNTLACGLCRVNRLDEAKTLLHIMIEMGVVPNYVTYTTLIS 430
Query: 567 SKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEV-KEGQR 625
D A LF+EM E S + +++ G + + +E+ K+G
Sbjct: 431 IHCKDGDMVEARRLFREMAEKGATPS-VVTYNVMIDGYTKKGSIREAERFRKEMEKKGFV 489
Query: 626 IDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEV 685
D V+ + +++H C + A K + M+ G PN + ++++G A G+
Sbjct: 490 PD--VYTYASLVHGHCVNGKVDVALKLFEEMKQRGTEPNVVAYTALISGLAK-EGRSEAA 546
Query: 686 TELWGEM 692
+L+ +M
Sbjct: 547 FQLYDDM 553
>gi|302819015|ref|XP_002991179.1| hypothetical protein SELMODRAFT_448320 [Selaginella moellendorffii]
gi|300141007|gb|EFJ07723.1| hypothetical protein SELMODRAFT_448320 [Selaginella moellendorffii]
Length = 561
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 67/303 (22%), Positives = 118/303 (38%), Gaps = 71/303 (23%)
Query: 399 IENHILSYEDFTKDRKFVALEAEVKRVLQT--------------------LLGMLQKQVE 438
IE + L E + + R F EA +R+L T L +Q+ +
Sbjct: 189 IEMYTLQIEGYGRRRSFDKAEAVFQRLLTTGPSPTAQTYQTMMKSYSEAGRLDDVQRIFK 248
Query: 439 LIT-TEHGILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVIT- 496
L+T + ++P ++Y ++ + + GK ++ ++E + ++ ++T
Sbjct: 249 LVTDSPSPTVKPDARMYNLMIHTYGKQGKVEQAMSVYQSMKRERVALT--------IVTF 300
Query: 497 ---LCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAG 553
L W D A D+ ++ A + Y +L+ AY +A R A D +AG
Sbjct: 301 NSLLACQKTWKD-AEDVFRKLQAAKLDPDVFSYTALVNAYAKARRAECAHAAFDDMIAAG 359
Query: 554 IQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLM 613
I+ Y AL+ + KD GA + K+MK++ GC
Sbjct: 360 IRPTQVAYNALINAYAKCKDPEGARAVLKQMKQN---------------GCTPT------ 398
Query: 614 AKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVT 673
V + ++I + LM AE+ + RM+ PN QTF ++T
Sbjct: 399 ----------------VESYTSLISAYVSVNLMAKAEQTVLRMKEADLQPNLQTFCILMT 442
Query: 674 GYA 676
GYA
Sbjct: 443 GYA 445
>gi|224123314|ref|XP_002319048.1| predicted protein [Populus trichocarpa]
gi|222857424|gb|EEE94971.1| predicted protein [Populus trichocarpa]
Length = 497
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 102/224 (45%), Gaps = 12/224 (5%)
Query: 502 GWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCY 561
G +D+A LL EM + + Y++L+K + + RP++ LL + RS G+ D Y
Sbjct: 271 GRIDEAKGLLAEMSHKALTPDTVTYSTLMKGFCQDGRPQDAQKLLEEMRSYGLLPDLMTY 330
Query: 562 EALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEV- 620
+L Q A L K M+ESKI + + +L++G + +L +
Sbjct: 331 SIVLDGLCKQGHLDEAFELLKAMQESKIEPNIFI-YTILIQGMCNFGKLEAARELFSNLF 389
Query: 621 KEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIG- 679
+G + D V + +I K L +A + + M G LPN+ T++ ++ G+ G
Sbjct: 390 VKGIQPD--VVTYTVMISGLLKGGLSNEACELFRDMAVHGCLPNSCTYNVIIQGFLRNGD 447
Query: 680 ----GKYTEVTELWGEMKSFASST-SMNFDEELLDSVLYTFVRG 718
G+ E E+ G S SST M D E D ++ F+ G
Sbjct: 448 TSNAGRLIE--EMVGRGFSADSSTFQMLSDLESRDEIISLFMHG 489
Score = 52.4 bits (124), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 61/290 (21%), Positives = 119/290 (41%), Gaps = 18/290 (6%)
Query: 447 LQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQ 506
LQP + L+ + K K + + E + D +I +G
Sbjct: 43 LQPNHVTFSTLLNGL--SSKAKIIDAVKLFDEMVKMGYEPDVITYSTIINGLCKMGSTTM 100
Query: 507 AHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQ 566
A LL +M G + + VY++++ + + E L + + GI + Y ++L
Sbjct: 101 AIQLLKKMEEKGCKPNVVVYSTIIDSLCKDKLITEAMEFLSEMVNRGISPNVVTYSSILH 160
Query: 567 SKIVQKDTPGALHLFKEMKESKI-PRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQR 625
+ A LFK+M E + P + F +LV G ++ L A+ + E +
Sbjct: 161 GFCNLGRSNEATSLFKQMVERNVMPDT--VTFNILVDGLSKEGMI-LEAQCVFETMIEKG 217
Query: 626 IDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEV 685
++ V+ +N ++ +C + M +A+K M G P+ ++++ ++ G+ G+ E
Sbjct: 218 VEPNVNTYNALMDGYCSQSQMDEAQKLFNIMVRKGCAPSVRSYNILIKGHCK-SGRIDEA 276
Query: 686 TELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFF--ARANEVVAMMEE 733
L EM A + D+V Y+ + GF R + ++EE
Sbjct: 277 KGLLAEMSHKALTP---------DTVTYSTLMKGFCQDGRPQDAQKLLEE 317
Score = 43.9 bits (102), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 39/186 (20%), Positives = 71/186 (38%), Gaps = 38/186 (20%)
Query: 507 AHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQ 566
A +L M G++ + +++LL + + L + G + D Y ++
Sbjct: 31 AFSVLGNMFKLGLQPNHVTFSTLLNGLSSKAKIIDAVKLFDEMVKMGYEPDVITYSTIIN 90
Query: 567 SKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRI 626
T A+ L K+M+E KGC N
Sbjct: 91 GLCKMGSTTMAIQLLKKMEE---------------KGCKPN------------------- 116
Query: 627 DCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVT 686
V ++ +I CK +L+ +A + L M + G PN T+ S++ G+ + G+ E T
Sbjct: 117 ---VVVYSTIIDSLCKDKLITEAMEFLSEMVNRGISPNVVTYSSILHGFCNL-GRSNEAT 172
Query: 687 ELWGEM 692
L+ +M
Sbjct: 173 SLFKQM 178
>gi|222636757|gb|EEE66889.1| hypothetical protein OsJ_23712 [Oryza sativa Japonica Group]
Length = 579
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/223 (21%), Positives = 107/223 (47%), Gaps = 4/223 (1%)
Query: 452 KIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQAHDLL 511
+ Y +V F ++GK + L + +++ +Q + A G ++ + LD+A+ L
Sbjct: 333 RAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTV--ATYGAIVDGLAKIDRLDEAYMLF 390
Query: 512 DEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQ 571
+E G+ + +Y+SL+ + + R E +L + G+ + + +LL + +
Sbjct: 391 EEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLLDALVKA 450
Query: 572 KDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRIDCGVH 631
++ AL F+ MKE K P + + + +L+ G + + Q++++ Q + V
Sbjct: 451 EEINEALVCFQSMKEMKCPPNTYT-YSILINGLCRVQKYNKAFVFWQDMQK-QGLVPNVV 508
Query: 632 DWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTG 674
+ +I K + DA +R ++ G +P+A +F++++ G
Sbjct: 509 TYTTMISGLAKVGNITDAYSLFERFKANGGIPDAASFNALIEG 551
Score = 48.9 bits (115), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 51/235 (21%), Positives = 101/235 (42%), Gaps = 16/235 (6%)
Query: 502 GWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCY 561
G +D+A+ L ++M AG A+ VY SL++ + R + + ++ G + D +
Sbjct: 206 GQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGHKIFKELIRRGCKPDLTLL 265
Query: 562 EALLQSKIVQKDTPGALHLFKEMKESK-IPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEV 620
+ + +F++++ +P + + +L+ G + +A + + +
Sbjct: 266 NTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDV--RSYSILIHGLTKAGQARETSNIFHAM 323
Query: 621 KEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGG 680
K+ Q +N V+ FCK + A + L+ M+ P T+ ++V G A I
Sbjct: 324 KQ-QGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIVDGLAKI-D 381
Query: 681 KYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGF--FARANEVVAMMEE 733
+ E L+ E KS L+ VLY+ + GF R +E ++EE
Sbjct: 382 RLDEAYMLFEEAKSKGIE---------LNVVLYSSLIDGFGKVGRIDEAYLILEE 427
Score = 45.8 bits (107), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 49/220 (22%), Positives = 91/220 (41%), Gaps = 4/220 (1%)
Query: 453 IYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQAHDLLD 512
+Y L++ F G+ KE H + K E D L + G +++ + +
Sbjct: 229 VYTSLIRNFFIHGR-KEDGHKIFK-ELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFE 286
Query: 513 EMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQK 572
++ G Y+ L+ +A + RE + + + G LDA Y A++
Sbjct: 287 DIRSYGFLPDVRSYSILIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSG 346
Query: 573 DTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRIDCGVHD 632
A + +EMKE K + + +V G A+ L +E K + I+ V
Sbjct: 347 KVHKAYEILEEMKE-KCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKS-KGIELNVVL 404
Query: 633 WNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMV 672
++++I F K + +A L+ M G PN T++S++
Sbjct: 405 YSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLL 444
Score = 43.5 bits (101), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 47/205 (22%), Positives = 84/205 (40%), Gaps = 11/205 (5%)
Query: 487 DDAALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALL 546
DD + +I + G L +A +L +M + Y +++ Y A R + LL
Sbjct: 17 DDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIMGYGSAGRFEDAYKLL 76
Query: 547 RDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQE--FEMLVKGC 604
R G + ++L ++ AL LF+ MK+ P S +ML G
Sbjct: 77 ERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVMKKDAEPNSSTYNIIIDMLCLG- 135
Query: 605 AQNHEAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPN 664
+ EA ++L E++ + N ++ CK R +++A K + G P+
Sbjct: 136 GRVEEA---YRILDEMEHASLFP-NLLTVNIMVDRLCKARKLEEAYKIFESASQRGCNPD 191
Query: 665 AQTFHSMVTGYAAIGGKYTEVTELW 689
T+ S++ G GK +V E +
Sbjct: 192 CVTYCSLIDGL----GKKGQVDEAY 212
>gi|334183972|ref|NP_177860.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806398|sp|Q9FVX2.2|PP129_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g77360, mitochondrial; Flags: Precursor
gi|332197848|gb|AEE35969.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 517
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 77/171 (45%), Gaps = 38/171 (22%)
Query: 504 LDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEA 563
L++A D EM +G++A +V+ SL+ A+ +ANR + V +L++ +S G+ ++
Sbjct: 323 LEEAVDTFLEMERSGMKADVAVFNSLIGAFCKANRMKNVYRVLKEMKSKGVTPNSKSCNI 382
Query: 564 LLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEG 623
+L+ I + + A +F++M +K C + + M
Sbjct: 383 ILRHLIERGEKDEAFDVFRKM----------------IKVCEPDADTYTM---------- 416
Query: 624 QRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTG 674
VI FC+K+ M+ A+K K MR G P+ TF ++ G
Sbjct: 417 ------------VIKMFCEKKEMETADKVWKYMRKKGVFPSMHTFSVLING 455
>gi|296083846|emb|CBI24234.3| unnamed protein product [Vitis vinifera]
Length = 589
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 62/271 (22%), Positives = 108/271 (39%), Gaps = 11/271 (4%)
Query: 484 VSHDDAALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVT 543
V D + +I L G LDQA +M AG+ + +Y L+ + E
Sbjct: 233 VVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEAL 292
Query: 544 ALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKG 603
+ + G LD Y +L +K A LF EM E + + F L+ G
Sbjct: 293 KVRDEMLEQGCVLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYT-FTTLING 351
Query: 604 CAQNHEAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLP 663
+++ L + + + + + V +N +I FCK M+ + M S P
Sbjct: 352 YSKDGNMNKAVTLFEMMIQ-RNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYP 410
Query: 664 NAQTFHSMVTGYAAIGGKYTEVTELWGEM--KSFASSTSMNFDEELLDSVLYTFVRGGFF 721
N ++ ++ GY +G +E LW EM K F ++ ++++ + R G
Sbjct: 411 NHISYGILINGYCNMGC-VSEAFRLWDEMVEKGFEATIIT------CNTIVKGYCRAGNA 463
Query: 722 ARANEVVAMMEEGKMFIDKYKYRTLFLKYHK 752
+A+E ++ M + D Y TL + K
Sbjct: 464 VKADEFLSNMLLKGIVPDGITYNTLINGFIK 494
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 95/482 (19%), Positives = 183/482 (37%), Gaps = 84/482 (17%)
Query: 198 PPVTAWSAILAHMSLTAPGAYLAAELILEIGYLFQDGRVDPRKKCNAPLIAMKPNTNTFN 257
P V ++AI+ L G YL A+ G +D K I M P+T T+N
Sbjct: 165 PCVFTYNAIIN--GLCKTGKYLRAK-----------GVLDEMLK-----IGMSPDTATYN 206
Query: 258 IALAGCLLFETTRKAEQLLDIMPRIGVKADSNLLIIMAHIYERNGRREELRKLQRHIDEA 317
I L C + AE++ D MP GV D + + +NG ++ K R + A
Sbjct: 207 ILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNA 266
Query: 318 VNLSDIQFRQFYNCLLSCHLKFGDLNSASKMVLEMLQRAKEARNSLAAAMLPFNAVGVNN 377
D Y L+ + G ++ A K+ EML++ ++ +N + N
Sbjct: 267 GLAPD---NVIYTILIGGFCRNGVMSEALKVRDEMLEQG------CVLDVVTYNTIL--N 315
Query: 378 RTPSEQNVNCTNSV--DLENSGIIENHILSYEDFTKDRKFVALEAEVKRVLQTLLGMLQK 435
E+ ++ + + ++ G+ + + FT + + + + + M+Q+
Sbjct: 316 GLCKEKMLSEADELFTEMTERGVFPD----FYTFTTLINGYSKDGNMNKAVTLFEMMIQR 371
Query: 436 QVELITTEHGILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVI 495
L+P Y L+ F + + +++ + +H + G +I
Sbjct: 372 N----------LKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNH--ISYGILI 419
Query: 496 TLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQ 555
++G + +A L DEM G A+ +++K Y A + L + GI
Sbjct: 420 NGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIV 479
Query: 556 LDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAK 615
D Y L+ I +++ A L +M+ S GL+
Sbjct: 480 PDGITYNTLINGFIKEENMDRAFALVNKMENS-----------------------GLLPD 516
Query: 616 LLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGY 675
++ +N +++ F ++ MQ+AE + +M G P+ T+ S++ G+
Sbjct: 517 VIT--------------YNVILNGFSRQGRMQEAELIMLKMIERGVNPDRSTYTSLINGH 562
Query: 676 AA 677
Sbjct: 563 VT 564
Score = 56.2 bits (134), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 65/312 (20%), Positives = 131/312 (41%), Gaps = 18/312 (5%)
Query: 443 EHGILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQ--VSHDDAALGHVITLCIS 500
E G+ P Y L+ A+ G +E + + L+ V +A + LC +
Sbjct: 125 EKGVF-PDVVTYNTLINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIING---LCKT 180
Query: 501 LGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASC 560
+L +A +LDEM G+ ++ Y LL + + + + S G+ D
Sbjct: 181 GKYL-RAKGVLDEMLKIGMSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVS 239
Query: 561 YEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEV 620
+ AL+ AL F++MK + + + + +L+ G +N G+M++ L+
Sbjct: 240 FSALIGLLSKNGCLDQALKYFRDMKNAGLAPD-NVIYTILIGGFCRN---GVMSEALKVR 295
Query: 621 KEGQRIDC--GVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAI 678
E C V +N +++ CK++++ +A++ M G P+ TF +++ GY+
Sbjct: 296 DEMLEQGCVLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYSKD 355
Query: 679 GGKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFI 738
G VT + ++ D ++++ F +G + NE+ M +++
Sbjct: 356 GNMNKAVT-----LFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYP 410
Query: 739 DKYKYRTLFLKY 750
+ Y L Y
Sbjct: 411 NHISYGILINGY 422
Score = 56.2 bits (134), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 66/317 (20%), Positives = 129/317 (40%), Gaps = 21/317 (6%)
Query: 437 VELITTEHGILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVIT 496
VE + +G ++ LV+ +++A K +E + + L VS + A ++
Sbjct: 13 VESLVLTYGNCGSNPLVFDLLVRTYVQARKLREGCEAFRVLKSKGLCVSIN--ACNSLLG 70
Query: 497 LCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQL 556
+ +GW+D A ++ E+ +GV+ + ++ A + + + L D G+
Sbjct: 71 GLVKVGWVDLAWEIYQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFP 130
Query: 557 DASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKL 616
D Y L+ + Q A L M K + + ++ G + + +
Sbjct: 131 DVVTYNTLINAYCRQGLLEEAFELMDSMS-GKGLKPCVFTYNAIINGLCKTGKYLRAKGV 189
Query: 617 LQE-VKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGY 675
L E +K G D +N ++ C+ M DAE+ M S G +P+ +F +++ G
Sbjct: 190 LDEMLKIGMSPDTAT--YNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALI-GL 246
Query: 676 AAIGGKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYT-----FVRGGFFARANEVVAM 730
+ G + + + +MK+ + D+V+YT F R G + A +V
Sbjct: 247 LSKNGCLDQALKYFRDMKNAGLAP---------DNVIYTILIGGFCRNGVMSEALKVRDE 297
Query: 731 MEEGKMFIDKYKYRTLF 747
M E +D Y T+
Sbjct: 298 MLEQGCVLDVVTYNTIL 314
>gi|242044666|ref|XP_002460204.1| hypothetical protein SORBIDRAFT_02g024500 [Sorghum bicolor]
gi|241923581|gb|EER96725.1| hypothetical protein SORBIDRAFT_02g024500 [Sorghum bicolor]
Length = 637
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/178 (22%), Positives = 84/178 (47%), Gaps = 6/178 (3%)
Query: 504 LDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEA 563
++ A L E+ +G+ ++ V+ +L+ + +A R E + RD G+ Y +
Sbjct: 264 VNSAFVLYQELLNSGLIPNAVVFTTLIDGFCKAKRFSEAKDMFRDMPRFGVAPTVPVYNS 323
Query: 564 LLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEF--EMLVKGCAQNHEAGLMAKLLQEVK 621
L+ D AL L++EM + EF ++V+G + + A+ L+ V+
Sbjct: 324 LMDGAFRSGDAQEALSLYQEMTRLGL---CPDEFTCSIVVRGLCDGGQIQVAARFLEGVR 380
Query: 622 EGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIG 679
E ++ +N +I +C+ +++A RM +G PN ++ S++ G++ +G
Sbjct: 381 E-DGVNLNAAAYNALIDEYCRNGNLEEALATCTRMTEVGVEPNVVSYSSLIDGHSKLG 437
>gi|115438490|ref|NP_001043552.1| Os01g0611900 [Oryza sativa Japonica Group]
gi|21104680|dbj|BAB93270.1| fertility restorer homologue-like [Oryza sativa Japonica Group]
gi|113533083|dbj|BAF05466.1| Os01g0611900 [Oryza sativa Japonica Group]
gi|125571150|gb|EAZ12665.1| hypothetical protein OsJ_02580 [Oryza sativa Japonica Group]
gi|215767882|dbj|BAH00111.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 800
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 80/178 (44%), Gaps = 4/178 (2%)
Query: 499 ISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDA 558
I+ D+A+ LL EM GV + Y +L+ R EV +L+ + G A
Sbjct: 467 INKAAFDKAYALLAEMKQNGVSCNDYTYNTLINGLCVVGRVCEVGEMLKRFETEGFVPTA 526
Query: 559 SCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQ 618
Y +++ I A ++++M IP + + G + L K+L
Sbjct: 527 MTYNSIINGFIKAGMMGSAFAVYQQMCAKGIP-PNIVTYTSFIDGYCKTSCCDLALKMLN 585
Query: 619 EVK-EGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGY 675
+V+ +G R D + +N++I FC++ M A + L M G LPN ++S +TGY
Sbjct: 586 DVRCKGLRPD--IAAYNSLIFGFCQEGNMSHALQVLVLMLKDGLLPNISVYNSFITGY 641
Score = 47.8 bits (112), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 53/237 (22%), Positives = 93/237 (39%), Gaps = 13/237 (5%)
Query: 447 LQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQ 506
L PT+ Y L++ E G ++ + L S ++ VI ++
Sbjct: 313 LVPTDVTYTVLIRGCTEEGMPEKAYELCRQMRDHGLLPSTNE--FNMVIKGLLNDKLWKD 370
Query: 507 AHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQ 566
A L EM +G+ + Y L+ + + RE L G++ Y +LL
Sbjct: 371 AVSLFKEMADSGI-PDAFTYNILIHWLCQRRKIREALNLWEKMNETGVKPYIVTYHSLLL 429
Query: 567 SKIVQKDTPGALHLFKEMKESKIPRSGHQE----FEMLVKGCAQNHEAGLMAKLLQEVKE 622
V A+ L+ EM P G + L+KG LL E+K+
Sbjct: 430 CYCVNGCMDEAVKLYTEM-----PGKGFTPNVVTYTTLMKGHINKAAFDKAYALLAEMKQ 484
Query: 623 GQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIG 679
+ C + +N +I+ C + + + LKR + G +P A T++S++ G+ G
Sbjct: 485 NG-VSCNDYTYNTLINGLCVVGRVCEVGEMLKRFETEGFVPTAMTYNSIINGFIKAG 540
Score = 45.1 bits (105), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 57/275 (20%), Positives = 99/275 (36%), Gaps = 42/275 (15%)
Query: 454 YIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQAHDLLDE 513
Y L+ G+ E+ L + E E + +I I G + A + +
Sbjct: 494 YNTLINGLCVVGRVCEVGEMLKRFETEGFVPTA--MTYNSIINGFIKAGMMGSAFAVYQQ 551
Query: 514 MHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQKD 573
M G+ + Y S + Y + + +L D R G++ D + Y +L+ + +
Sbjct: 552 MCAKGIPPNIVTYTSFIDGYCKTSCCDLALKMLNDVRCKGLRPDIAAYNSLIFGFCQEGN 611
Query: 574 TPGALHLFKEM-KESKIPR--------SGHQEFEM------------------------- 599
AL + M K+ +P +G++ +M
Sbjct: 612 MSHALQVLVLMLKDGLLPNISVYNSFITGYKNLKMMEEALRLYEKMIKEGIDLDTATYTT 671
Query: 600 LVKGCAQNHEAGLMAKLLQE-VKEGQRIDCGVH-DWNNVIHFFCKKRLMQDAEKALKRMR 657
L+ G +++ KL E V +G D H + + H C+ + DA K L M
Sbjct: 672 LIDGFSKDGNVTFALKLYSEMVAKGNIPD---HITFTALTHGLCRNGDIDDARKLLDEMN 728
Query: 658 SLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEM 692
L PN ++ ++ GY GK E L EM
Sbjct: 729 RLDIRPNVLMYNMLINGYLR-NGKLQEAFRLHDEM 762
>gi|297802850|ref|XP_002869309.1| hypothetical protein ARALYDRAFT_491552 [Arabidopsis lyrata subsp.
lyrata]
gi|297315145|gb|EFH45568.1| hypothetical protein ARALYDRAFT_491552 [Arabidopsis lyrata subsp.
lyrata]
Length = 1114
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/178 (23%), Positives = 81/178 (45%), Gaps = 1/178 (0%)
Query: 502 GWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCY 561
G L +A L + M G R + ++Y L+ + +A AL + G++ D Y
Sbjct: 907 GRLYEAKQLFEGMSDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTY 966
Query: 562 EALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVK 621
L+ + LH F+E+KES + + +++ G + H L E+K
Sbjct: 967 SVLVDCLCMVGRVDEGLHYFRELKESGL-NPDVVCYNLIINGLGKFHRLEEALVLFNEMK 1025
Query: 622 EGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIG 679
+ + I ++ +N++I ++++A K ++ G PN TF++++ GY+ G
Sbjct: 1026 KSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSG 1083
Score = 48.1 bits (113), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 60/270 (22%), Positives = 109/270 (40%), Gaps = 21/270 (7%)
Query: 493 HVITLCISL----GWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANR---PREVTAL 545
+ T+CI + G +++A+++L M G Y L+ A A + +EV A
Sbjct: 261 YTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFAK 320
Query: 546 LRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEM-KESKIPRSGHQEFEMLVKG- 603
++ R + D Y LL +D + EM K+ +P F +LV
Sbjct: 321 MKTGRH---KPDRVTYITLLDRFSDNRDLDSVNQFWSEMEKDGHVPDV--VTFTILVDAL 375
Query: 604 CAQNHEAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLP 663
C + AKL +V Q I +H +N +I + + DA + M SLG P
Sbjct: 376 CKAGNFGEAFAKL--DVMRDQGILPNLHTYNTLICGLLRVHRLDDALEIFDNMESLGVKP 433
Query: 664 NAQTFHSMVTGYAAIGGKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFAR 723
A T+ + Y G + + E + +MK+ + ++ ++ LY+ + G
Sbjct: 434 TAYTYIVFIDYYGKSGDSVSAL-ETFEKMKTKGIAPNI----VACNASLYSLAKAGRDRE 488
Query: 724 ANEVVAMMEEGKMFIDKYKYRTLFLKYHKT 753
A ++ +++ + D Y + Y K
Sbjct: 489 AKQIFYGLKDIGLVPDSVTYNMMMKCYSKV 518
>gi|359479250|ref|XP_002275790.2| PREDICTED: pentatricopeptide repeat-containing protein
At5g01110-like [Vitis vinifera]
Length = 746
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 62/271 (22%), Positives = 108/271 (39%), Gaps = 11/271 (4%)
Query: 484 VSHDDAALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVT 543
V D + +I L G LDQA +M AG+ + +Y L+ + E
Sbjct: 390 VVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEAL 449
Query: 544 ALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKG 603
+ + G LD Y +L +K A LF EM E + + F L+ G
Sbjct: 450 KVRDEMLEQGCVLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYT-FTTLING 508
Query: 604 CAQNHEAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLP 663
+++ L + + + + + V +N +I FCK M+ + M S P
Sbjct: 509 YSKDGNMNKAVTLFEMMIQ-RNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYP 567
Query: 664 NAQTFHSMVTGYAAIGGKYTEVTELWGEM--KSFASSTSMNFDEELLDSVLYTFVRGGFF 721
N ++ ++ GY +G +E LW EM K F ++ ++++ + R G
Sbjct: 568 NHISYGILINGYCNMGC-VSEAFRLWDEMVEKGFEATIIT------CNTIVKGYCRAGNA 620
Query: 722 ARANEVVAMMEEGKMFIDKYKYRTLFLKYHK 752
+A+E ++ M + D Y TL + K
Sbjct: 621 VKADEFLSNMLLKGIVPDGITYNTLINGFIK 651
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 95/482 (19%), Positives = 184/482 (38%), Gaps = 84/482 (17%)
Query: 198 PPVTAWSAILAHMSLTAPGAYLAAELILEIGYLFQDGRVDPRKKCNAPLIAMKPNTNTFN 257
P V ++AI+ + T G YL A+ G +D K I M P+T T+N
Sbjct: 322 PCVFTYNAIINGLCKT--GKYLRAK-----------GVLDEMLK-----IGMSPDTATYN 363
Query: 258 IALAGCLLFETTRKAEQLLDIMPRIGVKADSNLLIIMAHIYERNGRREELRKLQRHIDEA 317
I L C + AE++ D MP GV D + + +NG ++ K R + A
Sbjct: 364 ILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNA 423
Query: 318 VNLSDIQFRQFYNCLLSCHLKFGDLNSASKMVLEMLQRAKEARNSLAAAMLPFNAVGVNN 377
D Y L+ + G ++ A K+ EML++ ++ +N + N
Sbjct: 424 GLAPD---NVIYTILIGGFCRNGVMSEALKVRDEMLEQG------CVLDVVTYNTIL--N 472
Query: 378 RTPSEQNVNCTNSV--DLENSGIIENHILSYEDFTKDRKFVALEAEVKRVLQTLLGMLQK 435
E+ ++ + + ++ G+ + + FT + + + + + M+Q+
Sbjct: 473 GLCKEKMLSEADELFTEMTERGVFPD----FYTFTTLINGYSKDGNMNKAVTLFEMMIQR 528
Query: 436 QVELITTEHGILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVI 495
L+P Y L+ F + + +++ + +H + G +I
Sbjct: 529 N----------LKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNH--ISYGILI 576
Query: 496 TLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQ 555
++G + +A L DEM G A+ +++K Y A + L + GI
Sbjct: 577 NGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIV 636
Query: 556 LDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAK 615
D Y L+ I +++ A L +M+ S GL+
Sbjct: 637 PDGITYNTLINGFIKEENMDRAFALVNKMENS-----------------------GLLPD 673
Query: 616 LLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGY 675
++ +N +++ F ++ MQ+AE + +M G P+ T+ S++ G+
Sbjct: 674 VIT--------------YNVILNGFSRQGRMQEAELIMLKMIERGVNPDRSTYTSLINGH 719
Query: 676 AA 677
Sbjct: 720 VT 721
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 66/317 (20%), Positives = 129/317 (40%), Gaps = 21/317 (6%)
Query: 437 VELITTEHGILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVIT 496
VE + +G ++ LV+ +++A K +E + + L VS + A ++
Sbjct: 170 VESLVLTYGNCGSNPLVFDLLVRTYVQARKLREGCEAFRVLKSKGLCVSIN--ACNSLLG 227
Query: 497 LCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQL 556
+ +GW+D A ++ E+ +GV+ + ++ A + + + L D G+
Sbjct: 228 GLVKVGWVDLAWEIYQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFP 287
Query: 557 DASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKL 616
D Y L+ + Q A L M K + + ++ G + + +
Sbjct: 288 DVVTYNTLINAYCRQGLLEEAFELMDSM-SGKGLKPCVFTYNAIINGLCKTGKYLRAKGV 346
Query: 617 LQE-VKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGY 675
L E +K G D +N ++ C+ M DAE+ M S G +P+ +F +++ G
Sbjct: 347 LDEMLKIGMSPDTAT--YNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALI-GL 403
Query: 676 AAIGGKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYT-----FVRGGFFARANEVVAM 730
+ G + + + +MK+ + D+V+YT F R G + A +V
Sbjct: 404 LSKNGCLDQALKYFRDMKNAGLAP---------DNVIYTILIGGFCRNGVMSEALKVRDE 454
Query: 731 MEEGKMFIDKYKYRTLF 747
M E +D Y T+
Sbjct: 455 MLEQGCVLDVVTYNTIL 471
Score = 56.6 bits (135), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 65/312 (20%), Positives = 131/312 (41%), Gaps = 18/312 (5%)
Query: 443 EHGILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQ--VSHDDAALGHVITLCIS 500
E G+ P Y L+ A+ G +E + + L+ V +A + LC +
Sbjct: 282 EKGVF-PDVVTYNTLINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIING---LCKT 337
Query: 501 LGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASC 560
+L +A +LDEM G+ ++ Y LL + + + + S G+ D
Sbjct: 338 GKYL-RAKGVLDEMLKIGMSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVS 396
Query: 561 YEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEV 620
+ AL+ AL F++MK + + + + +L+ G +N G+M++ L+
Sbjct: 397 FSALIGLLSKNGCLDQALKYFRDMKNAGLA-PDNVIYTILIGGFCRN---GVMSEALKVR 452
Query: 621 KEGQRIDC--GVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAI 678
E C V +N +++ CK++++ +A++ M G P+ TF +++ GY+
Sbjct: 453 DEMLEQGCVLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYSKD 512
Query: 679 GGKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFI 738
G VT + ++ D ++++ F +G + NE+ M +++
Sbjct: 513 GNMNKAVT-----LFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYP 567
Query: 739 DKYKYRTLFLKY 750
+ Y L Y
Sbjct: 568 NHISYGILINGY 579
>gi|356503775|ref|XP_003520679.1| PREDICTED: pentatricopeptide repeat-containing protein At5g12100,
mitochondrial-like [Glycine max]
Length = 777
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 108/542 (19%), Positives = 206/542 (38%), Gaps = 83/542 (15%)
Query: 248 AMKPNTNTFNIALAGCLLFETTRKAEQLLDIMPRIGVKADSNLLIIMAHIYERNGRREEL 307
M P+ +N+ L G + A +L D M + + ++ + Y + G EE
Sbjct: 187 GMGPSVFAYNLVLGGLCKVRRIKDARKLFDEMIQRNMVPNTVTYNTLIDGYCKVGGIEEA 246
Query: 308 RKLQRHIDEA---VNLSDIQFRQFYNCLLSCHLKFGDLNSASKMVLEMLQRAKEARNSLA 364
+ + E NL YN LL+ G ++ A +++LEM E L
Sbjct: 247 LGFKERMKEQNVECNLVT------YNSLLNGLCGSGRVDDAREVLLEM-----EGSGFLP 295
Query: 365 AAMLPFNAVGVNNRTPSEQNVNCTNSVDLENSGIIENHILSYEDFTKD-RKFVALEAEVK 423
L F D ++G ++ + ++ D R + L +
Sbjct: 296 GGFLSF-------------------VFDDHSNGAGDDGLFDGKEIRIDERTYCILLNGLC 336
Query: 424 RVLQTLLGMLQKQVELIT--TEHGILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKEN 481
RV G ++K E++ E+G+ P++ Y LV A+ + G K+ + E+
Sbjct: 337 RV-----GRIEKAEEVLAKLVENGV-TPSKISYNILVNAYCQEGDVKKAILTTEQMEERG 390
Query: 482 LQ------------------VSHDDAALGHVITLCISL----------GWLDQAH----- 508
L+ V H + + ++ +S G+ + H
Sbjct: 391 LEPNRITFNTVISKFCETGEVDHAETWVRRMVEKGVSPTVETYNSLINGYGQKGHFVRCF 450
Query: 509 DLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSK 568
+ LDEM AG++ + Y SL+ + + + +L D G+ +A Y L+++
Sbjct: 451 EFLDEMDKAGIKPNVISYGSLINCLCKDRKLIDAEIVLADMIGRGVSPNAEIYNMLIEAS 510
Query: 569 IVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRIDC 628
A F EM +S I + + L+ G +N L ++ G+ +
Sbjct: 511 CSLSKLKDAFRFFDEMIQSGIDAT-LVTYNTLINGLGRNGRVKKAEDLFLQMA-GKGCNP 568
Query: 629 GVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTEL 688
V +N++I + K Q + +M+ LG P TFH ++ YA + ++
Sbjct: 569 DVITYNSLISGYAKSVNTQKCLELYDKMKILGIKPTVGTFHPLI--YACRKEGVVTMDKM 626
Query: 689 WGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFIDKYKYRTLFL 748
+ EM + D+ + + ++Y++ G +A + M + + DK Y +L L
Sbjct: 627 FQEMLQM----DLVPDQFVYNEMIYSYAEDGNVMKAMSLHQQMVDQGVDCDKVTYNSLIL 682
Query: 749 KY 750
Y
Sbjct: 683 AY 684
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 74/188 (39%), Gaps = 37/188 (19%)
Query: 493 HVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSA 552
+++ LC LD+A DL M G S+ LL+ +++ + A+ D +
Sbjct: 92 NLLWLCSVSKMLDEATDLYSTMRKDGFVPSTRSVNRLLRTLVDSRHFEKTLAVFADVIDS 151
Query: 553 GIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGL 612
G + DA Y +Q+ ++ KD L K M
Sbjct: 152 GTRPDAVAYGKAVQAAVMLKDLDKGFELMKSM---------------------------- 183
Query: 613 MAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMV 672
VK+G + V +N V+ CK R ++DA K M +PN T+++++
Sbjct: 184 -------VKDG--MGPSVFAYNLVLGGLCKVRRIKDARKLFDEMIQRNMVPNTVTYNTLI 234
Query: 673 TGYAAIGG 680
GY +GG
Sbjct: 235 DGYCKVGG 242
>gi|296086456|emb|CBI32045.3| unnamed protein product [Vitis vinifera]
Length = 648
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/246 (21%), Positives = 99/246 (40%), Gaps = 40/246 (16%)
Query: 447 LQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQ 506
L+P E Y L+ + + GK KE F + + + ++ + + G +D
Sbjct: 324 LEPDEVTYTALIDGYCKEGKMKE--AFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDT 381
Query: 507 AHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQ 566
A++LL EM G+ + Y SL+ +A + L++D AG DA Y L+
Sbjct: 382 ANELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMD 441
Query: 567 SKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRI 626
+ ++ A L ++M + ++ +
Sbjct: 442 AYCKSREMVRAHELLRQMLDRELQPT---------------------------------- 467
Query: 627 DCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVT 686
V +N +++ FC +++D EK LK M G +PNA T++S++ Y I T
Sbjct: 468 ---VVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQY-CIRNNMRATT 523
Query: 687 ELWGEM 692
E++ M
Sbjct: 524 EIYRGM 529
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 63/281 (22%), Positives = 115/281 (40%), Gaps = 11/281 (3%)
Query: 473 FLIKAEKENLQVSHDDAALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKA 532
LI + NL +SH L I + + W+ + L++EM + G++ + Y ++
Sbjct: 177 LLISVDSCNLFISHLSEDLDG-IKIALKGEWVLK---LIEEMQIKGLKPNPYTYNGVILL 232
Query: 533 YIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRS 592
+ + E +LR+ S GI D Y L+ + A LF EM++ KI
Sbjct: 233 LCKTGKVAEAERVLREMISEGIAPDGVIYTTLIDGFCKLGNVSSAYRLFDEMQKRKIS-P 291
Query: 593 GHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKA 652
+ ++ G Q KL E+ +R++ + +I +CK+ M++A
Sbjct: 292 DFITYTAVICGLCQTGRVMEADKLFHEMV-CKRLEPDEVTYTALIDGYCKEGKMKEAFSL 350
Query: 653 LKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEMKSFASSTSMNFDEELLDSVL 712
+M +G PN T+ ++ G G+ EL EM + + +S++
Sbjct: 351 HNQMLQMGLTPNIVTYTALADGLCKC-GEVDTANELLHEM----CRKGLELNIYTYNSLV 405
Query: 713 YTFVRGGFFARANEVVAMMEEGKMFIDKYKYRTLFLKYHKT 753
+ G +A +++ ME D Y TL Y K+
Sbjct: 406 NGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKS 446
>gi|255548349|ref|XP_002515231.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223545711|gb|EEF47215.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 505
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 76/141 (53%), Gaps = 7/141 (4%)
Query: 556 LDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAK 615
LD +C+ ALL++ +K A +++ +K+ P Q F +L+ G Q+ EA L +
Sbjct: 174 LDTTCFNALLRTLCQEKSMTDARNVYHRLKKEFKP--NLQTFNILLSGWKQSEEAELFFE 231
Query: 616 LLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGY 675
++E+ G + D V +N++I +CK R M+ A K +++MR P+ T+ S++ G
Sbjct: 232 EMREL--GIKPD--VVSYNSLIDVYCKDREMEKAYKVVEKMREEDISPDVITYTSIIGGL 287
Query: 676 AAIGGKYTEVTELWGEMKSFA 696
+ G+ + ++ EMK +
Sbjct: 288 GLV-GQPDKARDILNEMKEYG 307
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/282 (19%), Positives = 115/282 (40%), Gaps = 35/282 (12%)
Query: 447 LQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQ 506
++P Y L+ + + + ++ + K +E+ +S D +I +G D+
Sbjct: 238 IKPDVVSYNSLIDVYCKDREMEKAYKVVEKMREED--ISPDVITYTSIIGGLGLVGQPDK 295
Query: 507 AHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQ 566
A D+L+EM G + Y ++++ Y A R + + L+ + S G+ +A+ Y +
Sbjct: 296 ARDILNEMKEYGCYPDVAAYNAVIRNYCIAKRLGDASNLMDEMASKGLSPNATTYNLFFR 355
Query: 567 SKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRI 626
D + L++ M ES GC N ++ + L++ ++ +++
Sbjct: 356 VFYWSNDLRNSWSLYRRMMES---------------GCLPNTQSCMF--LIRLFRKHEKV 398
Query: 627 DCGVHDWNNVIH---------------FFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSM 671
+ + WN+++ C + +AEK +M GH P+ +F
Sbjct: 399 EMALTLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKCFLQMIEKGHKPSNVSFRR- 457
Query: 672 VTGYAAIGGKYTEVTELWGEMKSFASSTSMNFDEELLDSVLY 713
+ + K+ + L +M F SS + EE L+ Y
Sbjct: 458 IKVLMELVNKHDALLNLQKKMAIFGSSIQLPEREEHLNETSY 499
>gi|357117807|ref|XP_003560653.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g02150-like [Brachypodium distachyon]
Length = 692
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 105/498 (21%), Positives = 190/498 (38%), Gaps = 77/498 (15%)
Query: 251 PNTNTFNIALAGCLLFETTRKAEQLLDIMPRIGVKADSNLLIIMAHIYERNGRREELRKL 310
PN TFNI + +A LL M IG D + Y + G EE+ KL
Sbjct: 192 PNVFTFNIMIDFLCKEGDLAEARALLARMKAIGCSPDVVTYNSLIDGYGKCGELEEVEKL 251
Query: 311 QRHIDEAVNLSDIQFRQFYNCLLSCHLKFGDLNSASKMVLEMLQRAKEARNSLAAAMLPF 370
+ D+ YN L++C KFG + A EM
Sbjct: 252 VGEMRGCGCRPDVVT---YNALVNCFCKFGRMERAYSYFAEM------------------ 290
Query: 371 NAVGVNNRTPSEQNVNCTNSVDLENSGIIENHILSYEDFTKDRKFVALEAEVKRVLQTLL 430
+ G++ N ++++ F ++A K
Sbjct: 291 -----------------------KREGVMAN-VVTFSTF--------VDAFCKN------ 312
Query: 431 GMLQKQVELIT-TEHGILQPTEKIYIKLVKAFLEAGKTKE---LTHFLIKAEKENLQVSH 486
GM+++ ++L ++P E Y LV +AG+ + LT+ +++ V++
Sbjct: 313 GMVREAMKLFAQMRMKGMKPNEVTYTCLVDGTCKAGRLDDALVLTNEMVQQGVPLNVVTY 372
Query: 487 DDAALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALL 546
G LC G + +A D+ M AG+RA+ +Y +L+ + +LL
Sbjct: 373 TVLVDG----LCKE-GKVAEAEDVFRLMERAGIRANELLYTTLIHGHFVYKNSERALSLL 427
Query: 547 RDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQ 606
+ + G++LD S Y AL+ + A L +M E + + + + ++ C +
Sbjct: 428 SEMKDKGMELDVSLYGALIWGLCNLQKLDEAKSLLNKMDECGL-KPNNVIYTNIMDACFK 486
Query: 607 NHEAGLMAKLLQEVKE-GQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNA 665
+ LLQ++ + G R + + + ++ CK + +A +M LG PN
Sbjct: 487 ARKESEAIALLQKMMDSGFRPN--IVTYCALVDGLCKAGSIDEAISHFNKMVDLGLEPNV 544
Query: 666 QTFHSMVTGYAAIGGKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARAN 725
Q + ++V G G+ + L EM M+ D + S++ ++ G A
Sbjct: 545 QAYTALVDGLCK-NGRLDKAVLLLDEM----IDKGMSLDNVVCTSLMDGHLKQGNLQDAF 599
Query: 726 EVVAMMEEGKMFIDKYKY 743
+ A M + +D Y Y
Sbjct: 600 ALKAKMINSGLQLDLYGY 617
>gi|147840312|emb|CAN63985.1| hypothetical protein VITISV_001389 [Vitis vinifera]
Length = 850
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 62/271 (22%), Positives = 107/271 (39%), Gaps = 11/271 (4%)
Query: 484 VSHDDAALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVT 543
V D + +I L G LDQA +M AG+ + +Y L+ + E
Sbjct: 494 VVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEAL 553
Query: 544 ALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKG 603
+ + G LD Y +L +K A LF EM E + + F L+ G
Sbjct: 554 KVRDEMLEQGCXLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYT-FTTLING 612
Query: 604 CAQNHEAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLP 663
++ L + + + + + V +N +I FCK M+ + M S P
Sbjct: 613 YXKDGNMNKAVTLFEMMIQ-RNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYP 671
Query: 664 NAQTFHSMVTGYAAIGGKYTEVTELWGEM--KSFASSTSMNFDEELLDSVLYTFVRGGFF 721
N ++ ++ GY +G +E LW EM K F ++ ++++ + R G
Sbjct: 672 NHISYGILINGYCNMGC-VSEAFRLWDEMVEKGFEATIIT------CNTIVKGYCRAGNA 724
Query: 722 ARANEVVAMMEEGKMFIDKYKYRTLFLKYHK 752
+A+E ++ M + D Y TL + K
Sbjct: 725 VKADEFLSNMLLKGIVPDGITYNTLINGFIK 755
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 95/482 (19%), Positives = 183/482 (37%), Gaps = 84/482 (17%)
Query: 198 PPVTAWSAILAHMSLTAPGAYLAAELILEIGYLFQDGRVDPRKKCNAPLIAMKPNTNTFN 257
P V ++AI+ + T G YL A+ G +D K I M P+T T+N
Sbjct: 426 PCVFTYNAIINGLCKT--GKYLRAK-----------GVLDEMLK-----IGMSPDTATYN 467
Query: 258 IALAGCLLFETTRKAEQLLDIMPRIGVKADSNLLIIMAHIYERNGRREELRKLQRHIDEA 317
I L C + AE++ D MP GV D + + +NG ++ K R + A
Sbjct: 468 ILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNA 527
Query: 318 VNLSDIQFRQFYNCLLSCHLKFGDLNSASKMVLEMLQRAKEARNSLAAAMLPFNAVGVNN 377
D Y L+ + G ++ A K+ EML++ ++ +N + N
Sbjct: 528 GLAPD---NVIYTILIGGFCRNGVMSEALKVRDEMLEQG------CXLDVVTYNTIL--N 576
Query: 378 RTPSEQNVNCTNSV--DLENSGIIENHILSYEDFTKDRKFVALEAEVKRVLQTLLGMLQK 435
E+ ++ + + ++ G+ + + FT + + + + M+Q+
Sbjct: 577 GLCKEKMLSEADELFTEMTERGVFPD----FYTFTTLINGYXKDGNMNKAVTLFEMMIQR 632
Query: 436 QVELITTEHGILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVI 495
L+P Y L+ F + + +++ + +H + G +I
Sbjct: 633 N----------LKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNH--ISYGILI 680
Query: 496 TLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQ 555
++G + +A L DEM G A+ +++K Y A + L + GI
Sbjct: 681 NGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIV 740
Query: 556 LDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAK 615
D Y L+ I +++ A L +M+ S GL+
Sbjct: 741 PDGITYNTLINGFIKEENMDRAFALVNKMENS-----------------------GLLPD 777
Query: 616 LLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGY 675
++ +N +++ F ++ MQ+AE + +M G P+ T+ S++ G+
Sbjct: 778 VIT--------------YNVILNGFSRQGRMQEAELIMLKMIERGVNPDRSTYTSLINGH 823
Query: 676 AA 677
Sbjct: 824 VT 825
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 66/317 (20%), Positives = 129/317 (40%), Gaps = 21/317 (6%)
Query: 437 VELITTEHGILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVIT 496
VE + +G ++ LV+ +++A K +E + + L VS + A ++
Sbjct: 274 VESLVLTYGNCGSNPLVFDLLVRTYVQARKLREGCEAFRVLKSKGLCVSIN--ACNSLLG 331
Query: 497 LCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQL 556
+ +GW+D A ++ E+ +GV+ + ++ A + + + L D G+
Sbjct: 332 GLVKVGWVDLAWEIYQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFP 391
Query: 557 DASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKL 616
D Y L+ + Q A L M K + + ++ G + + +
Sbjct: 392 DVVTYNTLINAYCRQGLLEEAFELMDSM-SGKGLKPCVFTYNAIINGLCKTGKYLRAKGV 450
Query: 617 LQE-VKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGY 675
L E +K G D +N ++ C+ M DAE+ M S G +P+ +F +++ G
Sbjct: 451 LDEMLKIGMSPDTAT--YNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALI-GL 507
Query: 676 AAIGGKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYT-----FVRGGFFARANEVVAM 730
+ G + + + +MK+ + D+V+YT F R G + A +V
Sbjct: 508 LSKNGCLDQALKYFRDMKNAGLAP---------DNVIYTILIGGFCRNGVMSEALKVRDE 558
Query: 731 MEEGKMFIDKYKYRTLF 747
M E +D Y T+
Sbjct: 559 MLEQGCXLDVVTYNTIL 575
Score = 56.2 bits (134), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 65/314 (20%), Positives = 134/314 (42%), Gaps = 22/314 (7%)
Query: 443 EHGILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQ--VSHDDAALGHVITLCIS 500
E G+ P Y L+ A+ G +E + + L+ V +A + LC +
Sbjct: 386 EKGVF-PDVVTYNTLINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIING---LCKT 441
Query: 501 LGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASC 560
+L +A +LDEM G+ ++ Y LL + + + + S G+ D
Sbjct: 442 GKYL-RAKGVLDEMLKIGMSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVS 500
Query: 561 YEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLL--- 617
+ AL+ AL F++MK + + + + +L+ G +N G+M++ L
Sbjct: 501 FSALIGLLSKNGCLDQALKYFRDMKNAGLA-PDNVIYTILIGGFCRN---GVMSEALKVR 556
Query: 618 -QEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYA 676
+ +++G +D V +N +++ CK++++ +A++ M G P+ TF +++ GY
Sbjct: 557 DEMLEQGCXLD--VVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYX 614
Query: 677 AIGGKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKM 736
G VT + ++ D ++++ F +G + NE+ M ++
Sbjct: 615 KDGNMNKAVT-----LFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRI 669
Query: 737 FIDKYKYRTLFLKY 750
+ + Y L Y
Sbjct: 670 YPNHISYGILINGY 683
>gi|413948663|gb|AFW81312.1| hypothetical protein ZEAMMB73_082399 [Zea mays]
Length = 798
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 89/194 (45%), Gaps = 5/194 (2%)
Query: 500 SLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDAS 559
SLG L++A LL +M +G++ Y L++ Y + R E ++ G + +++
Sbjct: 285 SLGQLEEAVRLLKKMSGSGLQPDVVTYILLIQYYCKIGRCAEARSVFDSMVRKGQKPNST 344
Query: 560 CYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQE 619
Y LL + L M IP H+ F +L+ A++ E
Sbjct: 345 IYHILLHGYATKGALIDVRDLLDLMIRDGIPFE-HRAFNILICAYAKHGAVDKAMTAFTE 403
Query: 620 VKE-GQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAI 678
+++ G R D V ++ VIH CK ++DA +M S G PN +F S++ G +I
Sbjct: 404 MRQNGLRPD--VVSYSTVIHILCKIGRVEDAVYHFNQMVSEGLSPNIISFTSLIHGLCSI 461
Query: 679 GGKYTEVTELWGEM 692
G++ +V EL EM
Sbjct: 462 -GEWKKVEELAFEM 474
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 47/196 (23%), Positives = 80/196 (40%), Gaps = 12/196 (6%)
Query: 491 LGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALL-RDA 549
+G +I ++G LD A G R + L+K + R + ++ R
Sbjct: 97 IGILIRCFCTVGRLDLAFAAFALFLKMGWRVQNVTLNQLIKGLCDGKRTDDAMDMVFRRM 156
Query: 550 RSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQ------EFEMLVKG 603
G D Y AL++ V+K + AL L M G+ + ++ G
Sbjct: 157 PELGYTPDVFSYNALIKGLCVEKKSQEALELLLHMTAD----GGYNCSPNVVSYSTIIDG 212
Query: 604 CAQNHEAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLP 663
+ E L E+ GQ V ++++I CK + M AE L+ M G +P
Sbjct: 213 FFKEGEVDKAYFLFDEMI-GQGFPPDVVTYSSLIDGLCKAQAMNKAEAILQHMFDKGVMP 271
Query: 664 NAQTFHSMVTGYAAIG 679
N +T++ M+ GY ++G
Sbjct: 272 NTRTYNIMIRGYCSLG 287
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 72/325 (22%), Positives = 127/325 (39%), Gaps = 35/325 (10%)
Query: 430 LGMLQKQVELITTEHGI-LQPTEKIYIKLVKAFLEAGKTKE----LTHFLIKAEKENLQV 484
LG L++ V L+ G LQP YI L++ + + G+ E + K +K N +
Sbjct: 286 LGQLEEAVRLLKKMSGSGLQPDVVTYILLIQYYCKIGRCAEARSVFDSMVRKGQKPNSTI 345
Query: 485 SHDDAALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTA 544
H L H + G L DLLD M G+ + L+ AY + +
Sbjct: 346 YH---ILLHGYA---TKGALIDVRDLLDLMIRDGIPFEHRAFNILICAYAKHGAVDKAMT 399
Query: 545 LLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGC 604
+ R G++ D Y ++ A++ F +M + F L+ G
Sbjct: 400 AFTEMRQNGLRPDVVSYSTVIHILCKIGRVEDAVYHFNQMVSEGLS-PNIISFTSLIHGL 458
Query: 605 AQNHEAGLMAKLLQEVKEGQRIDCGVHD----WNNVIHFFCKKRLMQDAEKALKRMRSLG 660
E + +L E+ I+ G+H N ++ CK+ + +A+ + +G
Sbjct: 459 CSIGEWKKVEELAFEM-----INRGIHPDAIFMNTIMDNLCKEGRVVEAQDFFDMVIHIG 513
Query: 661 HLPNAQTFHSMVTGYAAIGGKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGF 720
PN ++++++ GY + GK E + + M S DS Y + G+
Sbjct: 514 VKPNVVSYNTLIDGYCFV-GKMDESIKQFDRMVSIGLRP---------DSWTYNALLNGY 563
Query: 721 F--ARANEVVAMMEEGKMFIDKYKY 743
F R + +A+ E MF K+
Sbjct: 564 FKNGRVEDALALYRE--MFRKDVKF 586
Score = 41.6 bits (96), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 107/564 (18%), Positives = 209/564 (37%), Gaps = 64/564 (11%)
Query: 195 EQYPP-VTAWSAILAHMSLTAPGAYLAAELILEIGYLFQDGRVDPRKKCNAPLIAMKPNT 253
+ +PP V +S+++ L A AE IL+ ++F G + PNT
Sbjct: 232 QGFPPDVVTYSSLID--GLCKAQAMNKAEAILQ--HMFDKG--------------VMPNT 273
Query: 254 NTFNIALAGCLLFETTRKAEQLLDIMPRIGVKADSNLLIIMAHIYERNGRREELRKLQRH 313
T+NI + G +A +LL M G++ D I++ Y + GR E R +
Sbjct: 274 RTYNIMIRGYCSLGQLEEAVRLLKKMSGSGLQPDVVTYILLIQYYCKIGRCAEARSV--- 330
Query: 314 IDEAVNLSDIQFRQFYNCLLSCHLKFGDLNSASKMVLEMLQR--------------AKEA 359
D V Y+ LL + G L ++ M++ A
Sbjct: 331 FDSMVRKGQKPNSTIYHILLHGYATKGALIDVRDLLDLMIRDGIPFEHRAFNILICAYAK 390
Query: 360 RNSLAAAMLPFNAVGVNNRTPSEQNVNCTNSVDLENSGIIENHILSYEDFTKDRKFVALE 419
++ AM F + N P + + + L G +E+ + + + L
Sbjct: 391 HGAVDKAMTAFTEMRQNGLRPDVVSYSTVIHI-LCKIGRVEDAVYHFNQMVSE----GLS 445
Query: 420 AEVKRVLQTLLGMLQ----KQVELITTE---HGILQPTEKIYIKLVKAFLEAGKTKELTH 472
+ + G+ K+VE + E GI P ++ + G+ E
Sbjct: 446 PNIISFTSLIHGLCSIGEWKKVEELAFEMINRGI-HPDAIFMNTIMDNLCKEGRVVEAQD 504
Query: 473 F---LIKAEKENLQVSHDDAALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASL 529
F +I + VS++ G+ +G +D++ D M G+R S Y +L
Sbjct: 505 FFDMVIHIGVKPNVVSYNTLIDGYCF-----VGKMDESIKQFDRMVSIGLRPDSWTYNAL 559
Query: 530 LKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKI 589
L Y + R + AL R+ ++ A +L A L+ +M + +
Sbjct: 560 LNGYFKNGRVEDALALYREMFRKDVKFCAITSNIILHGLFQAGRIVAARELYMKMVD-RG 618
Query: 590 PRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDA 649
+ + + ++ G +N ++ ++++ + + V +N VI+ K + +A
Sbjct: 619 TQLRIETYNTVLGGLCENSCVDEALRMFEDLRS-KEFELDVWTFNIVINALLKVGRIDEA 677
Query: 650 EKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEMKSFASSTSMNFDEELLD 709
+ M G +P+ T+ M+ G E +L+ M+ + D +L+
Sbjct: 678 KSLFSAMVLRGPVPHVITYSLMIKSRIE-EGLLEESDDLFLSMEKNGCAA----DSHMLN 732
Query: 710 SVLYTFVRGGFFARANEVVAMMEE 733
++ + G RA + ++E
Sbjct: 733 VIIRRLLEKGDVRRAGTYLTKIDE 756
Score = 39.3 bits (90), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 53/268 (19%), Positives = 111/268 (41%), Gaps = 34/268 (12%)
Query: 247 IAMKPNTNTFNIALAGCLLFETTRKAEQLLDIMPRIGVKADSNLLIIMAHIYERNGRREE 306
I +KPN ++N + G ++ + D M IG++ DS + + Y +NGR E+
Sbjct: 512 IGVKPNVVSYNTLIDGYCFVGKMDESIKQFDRMVSIGLRPDSWTYNALLNGYFKNGRVED 571
Query: 307 LRKLQRHIDEAVNLSDIQFRQFY-NCLLSCHLKFGDLNSASKMVLEMLQRAKEAR----N 361
L R + D++F N +L + G + +A ++ ++M+ R + R N
Sbjct: 572 ALALYREMFR----KDVKFCAITSNIILHGLFQAGRIVAARELYMKMVDRGTQLRIETYN 627
Query: 362 SLAAAMLPFNAVGVNNRTPSEQNVNCTNSVDLENSGIIENHILSYEDFTKDRKF---VAL 418
++ + + V R + +D+ I+ N +L + + + L
Sbjct: 628 TVLGGLCENSCVDEALRMFEDLRSK-EFELDVWTFNIVINALLKVGRIDEAKSLFSAMVL 686
Query: 419 EAEVKRVLQTLLGMLQKQVELITTEHGILQPTEKIYIKL---------------VKAFLE 463
V V+ L M++ ++ E G+L+ ++ +++ + ++ LE
Sbjct: 687 RGPVPHVITYSL-MIKSRI-----EEGLLEESDDLFLSMEKNGCAADSHMLNVIIRRLLE 740
Query: 464 AGKTKELTHFLIKAEKENLQVSHDDAAL 491
G + +L K +++N V AAL
Sbjct: 741 KGDVRRAGTYLTKIDEKNFSVEASTAAL 768
>gi|22296415|dbj|BAC10183.1| pentatricopeptide repeat protein-like [Oryza sativa Japonica Group]
Length = 624
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 63/254 (24%), Positives = 116/254 (45%), Gaps = 20/254 (7%)
Query: 446 ILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLD 505
I++P + +++ + G+ ++ F ++A E + + +++T + +G L
Sbjct: 322 IVKPNVVTFNSVIQGLCDIGRMRQ--AFQVRAMME------ETGCMVNLVTYNLLIGGLL 373
Query: 506 QAH------DLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDAS 559
+ H +L+DEM G+ S Y+ L+K + + + LL R GI+ +
Sbjct: 374 RVHKVRKAMELMDEMTSLGLEPDSFTYSILIKGFCKMWQVDRAEDLLSTMRDRGIEPELF 433
Query: 560 CYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQE 619
Y LL + Q A +LF EM ++ P + ++ G + + +LL+
Sbjct: 434 HYIPLLVAMCEQGMMERARNLFNEM-DNNFPLD-VVAYSTMIHGACKAGDLKTAKELLKS 491
Query: 620 -VKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAI 678
V EG D ++ VI+ F K M+ A LK+M + G LP+ F S++ GY+
Sbjct: 492 IVDEGLTPD--AVTYSIVINMFAKSGDMEAANGVLKQMTASGFLPDVAVFDSLIQGYST- 548
Query: 679 GGKYTEVTELWGEM 692
G+ +V EL EM
Sbjct: 549 KGEINKVLELIREM 562
Score = 59.3 bits (142), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 73/316 (23%), Positives = 132/316 (41%), Gaps = 51/316 (16%)
Query: 444 HGILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGW 503
H +P Y L++A L A + + L+++ + + V D G +I
Sbjct: 108 HPACRPNAVSYTVLMRA-LCADRLADQAVGLLRSMR-SAGVRADVVTYGTLIRGLCDAAE 165
Query: 504 LDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEA 563
+D+A +L+ EM +G+ + VY+SLL+ Y ++ R +V + + GI+ D Y
Sbjct: 166 VDKAVELMGEMCESGIEPNVVVYSSLLQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTG 225
Query: 564 LLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEG 623
L+ S L K K K H +M+V+
Sbjct: 226 LIDS------------LCKVGKAKK----AHGVMDMMVR--------------------- 248
Query: 624 QRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYT 683
+ ++ V +N +I+ CK+ +++A LK+M G P+ T+++++ G + + +
Sbjct: 249 RGLEPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDV-LEMD 307
Query: 684 EVTELWGEM---KSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFIDK 740
E L EM K+ + F +SV+ G +A +V AMMEE ++
Sbjct: 308 EAMWLLEEMVRGKNIVKPNVVTF-----NSVIQGLCDIGRMRQAFQVRAMMEETGCMVNL 362
Query: 741 YKYRTL---FLKYHKT 753
Y L L+ HK
Sbjct: 363 VTYNLLIGGLLRVHKV 378
>gi|359474768|ref|XP_002270963.2| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
chloroplastic [Vitis vinifera]
Length = 1022
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 67/318 (21%), Positives = 129/318 (40%), Gaps = 17/318 (5%)
Query: 433 LQKQVELITTEHGILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALG 492
L+K + T + P ++ + AF + GK ++ EK L VS +
Sbjct: 295 LEKSYWVFETMRQGVSPDVYLFSTAINAFCKGGKVEDAIQLFFDMEK--LGVSPNVVTYN 352
Query: 493 HVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSA 552
++I G LD+A ++M GV A+ Y+ L+ ++ + E ++L++
Sbjct: 353 NLIHGLCKHGNLDEAFRFKEKMVKDGVNATLITYSVLINGLMKLEKFNEANSVLKETLEK 412
Query: 553 GIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKI-PRSGHQEFEMLVKGCAQNHEAG 611
G + Y L+ + AL + +M I P S +++G + +
Sbjct: 413 GFTPNEVVYNTLIDGYCKMGNLGDALRIRGDMVSKGINPNS--VTLNSIIQGFCKIGQME 470
Query: 612 LMAKLLQE-VKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHS 670
+L+E + G I+ G + +IH+ C + A + L+ M PN +
Sbjct: 471 QAECILEEMLSRGFSINPGA--FTTIIHWLCMNSRFESALRFLREMLLRNMRPNDGLLTT 528
Query: 671 MVTGYAAIGGKYTEVTELWGEM--KSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVV 728
+V G GK+++ ELW + K F ++ +++++ + G A ++
Sbjct: 529 LVGGLCK-EGKHSDAVELWFRLLEKGFGANLVTT------NALIHGLCKTGNMQEAVRLL 581
Query: 729 AMMEEGKMFIDKYKYRTL 746
M E +DK Y TL
Sbjct: 582 KKMLERGFVLDKITYNTL 599
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 56/268 (20%), Positives = 108/268 (40%), Gaps = 45/268 (16%)
Query: 431 GMLQKQVELITT--EHGILQPTEKI-YIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHD 487
G +Q+ V L+ E G + +KI Y L+ + GK +E F ++ E + D
Sbjct: 572 GNMQEAVRLLKKMLERGFV--LDKITYNTLISGCCKEGKVEE--GFKLRGEMVKQGIEPD 627
Query: 488 DAALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLR 547
+I +G LD+A +L +E + + Y ++ Y +A++ E L
Sbjct: 628 TFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYCKADKIEEGEKLFT 687
Query: 548 DARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQN 607
+ + ++L++ Y L+++ +T A L +M+ IP +
Sbjct: 688 ELLTQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIPPT--------------- 732
Query: 608 HEAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQT 667
++++IH C M+DA+ + MR G LPN
Sbjct: 733 ----------------------TATYSSLIHGMCNIGRMEDAKCLIDEMRKEGLLPNVVC 770
Query: 668 FHSMVTGYAAIGGKYTEVTELWGEMKSF 695
+ +++ GY + G+ +V + EM S+
Sbjct: 771 YTALIGGYCKL-GQMDKVVNVLQEMSSY 797
>gi|357111070|ref|XP_003557338.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g06920-like [Brachypodium distachyon]
Length = 878
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/249 (23%), Positives = 115/249 (46%), Gaps = 11/249 (4%)
Query: 449 PTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVIT-LCISLGWLDQA 507
P + Y L+ +AG+ +E ++ ++ + D A V+ LC S G +D+A
Sbjct: 558 PDVRSYSILIHGLTKAGQARETSNIFQAMSQQGFAL--DARAYNAVVDGLCKS-GKVDKA 614
Query: 508 HDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQ- 566
+++L+EM + V + + Y S++ + +R E L +A+S GI+L+ Y +L+
Sbjct: 615 YEVLEEMKVKHVHPTVATYGSIVDGLAKIDRLDEAYMLFEEAKSKGIELNVILYSSLIDG 674
Query: 567 -SKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQR 625
K+ + D L L + MK+ P + L+ + E Q +KE +
Sbjct: 675 FGKVGRIDE-AYLILEEMMKKGLTPNV--YTWNSLMDALVKTEEIDEALICFQSMKE-MK 730
Query: 626 IDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEV 685
+ ++ +I+ C+ + A + M+ G +PN T+ +M++G A + G T+
Sbjct: 731 CSPNTYTYSILINGLCRVQKYNKAFVFWQEMQKQGLIPNVVTYTTMISGLAKV-GNITDA 789
Query: 686 TELWGEMKS 694
L+ K+
Sbjct: 790 YSLFERFKT 798
Score = 46.2 bits (108), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 46/214 (21%), Positives = 89/214 (41%), Gaps = 9/214 (4%)
Query: 470 LTHFLIKAEKENLQVSH-----DDAALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSS 524
L+H L EK ++SH + A ++ + L+ A ++ M R S
Sbjct: 118 LSHDLAALEKVLEEMSHLGYGLPNPACAALVATLVRSRRLEDAFRVIGAMRHLKFRPPFS 177
Query: 525 VYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEM 584
Y L+ A EA +P LLR + G ++ + L+++ + AL L E+
Sbjct: 178 AYTVLIGALAEARQPERALELLRQMQDVGYEVSVPLFTTLVRALAREGQMEPALALVDEV 237
Query: 585 KESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVK-EGQRIDCGVHDWNNVIHFFCKK 643
K S + + + + + + K E+K G R D + +++ CK
Sbjct: 238 KGSCL-EPDIVLYNVCIDCFGKAGSVDMAWKFFHELKAHGLRPD--DVSYTSMVWVLCKA 294
Query: 644 RLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAA 677
+ +AE+ +M + +P A +++M+ GY +
Sbjct: 295 GRLGEAEELFGQMEAERDVPCAYAYNTMIMGYGS 328
Score = 43.9 bits (102), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 51/222 (22%), Positives = 93/222 (41%), Gaps = 8/222 (3%)
Query: 453 IYIKLVKAFLEAGKTKELTHFLIKAEKENLQVS-HDDAALGHVITLCI-SLGWLDQAHDL 510
IY L++ F G+ KE H K KE ++ D L + C+ G +++ +
Sbjct: 492 IYTSLIRNFFMHGR-KEDGH---KIYKEMIRRGGRPDLTLLNTYMDCVFKAGEVEKGRAI 547
Query: 511 LDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIV 570
++M G Y+ L+ +A + RE + + + G LDA Y A++
Sbjct: 548 FEDMKSFGFLPDVRSYSILIHGLTKAGQARETSNIFQAMSQQGFALDARAYNAVVDGLCK 607
Query: 571 QKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRIDCGV 630
A + +EMK + + +V G A+ L +E K + I+ V
Sbjct: 608 SGKVDKAYEVLEEMKVKHV-HPTVATYGSIVDGLAKIDRLDEAYMLFEEAK-SKGIELNV 665
Query: 631 HDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMV 672
++++I F K + +A L+ M G PN T++S++
Sbjct: 666 ILYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLM 707
Score = 42.7 bits (99), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 34/169 (20%), Positives = 74/169 (43%), Gaps = 2/169 (1%)
Query: 505 DQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEAL 564
++A +LL +M G S ++ +L++A + AL+ + + + ++ D Y
Sbjct: 193 ERALELLRQMQDVGYEVSVPLFTTLVRALAREGQMEPALALVDEVKGSCLEPDIVLYNVC 252
Query: 565 LQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQ 624
+ A F E+K + R + +V + G +L +++ +
Sbjct: 253 IDCFGKAGSVDMAWKFFHELKAHGL-RPDDVSYTSMVWVLCKAGRLGEAEELFGQMEAER 311
Query: 625 RIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVT 673
+ C + +N +I + DA K L+R+R G +P+ +F+S++T
Sbjct: 312 DVPCA-YAYNTMIMGYGSAERFDDAYKLLERLRERGCIPSVVSFNSILT 359
>gi|110741592|dbj|BAE98744.1| PPR-repeat protein [Arabidopsis thaliana]
Length = 548
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 63/258 (24%), Positives = 106/258 (41%), Gaps = 23/258 (8%)
Query: 504 LDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEA 563
++ A D E+ G+R + Y +L+ ++R + LL D I + Y A
Sbjct: 206 VNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSA 265
Query: 564 LLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKG-CAQNH--EAGLMAKLLQEV 620
LL + + A LF+EM I + LV G C + EA M L+ V
Sbjct: 266 LLDAFVKNGKVLEAKELFEEMVRMSID-PDIVTYSSLVNGLCLHDRIDEANQMFDLM--V 322
Query: 621 KEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGG 680
+G D V +N +I+ FCK + ++D K + M G + N T+++++ G+ G
Sbjct: 323 SKGCLAD--VVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQ-AG 379
Query: 681 KYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGF-----FARANEVVAMMEEGK 735
+ E + +M F S D Y + GG +A + M++ +
Sbjct: 380 DVDKAQEFFSQMDFFGISP---------DIWTYNILLGGLCDNGELEKALVIFEDMQKRE 430
Query: 736 MFIDKYKYRTLFLKYHKT 753
M +D Y T+ KT
Sbjct: 431 MDLDIVTYTTVIRGMCKT 448
Score = 45.1 bits (105), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 44/195 (22%), Positives = 79/195 (40%), Gaps = 2/195 (1%)
Query: 480 ENLQVSHDDAALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRP 539
E L + +D VI + A +L +M G SL+ + NR
Sbjct: 112 EVLGIRNDLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRV 171
Query: 540 REVTALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEM 599
+ +L+ G + D Y A++ S K A FKE+ E K R +
Sbjct: 172 SDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEI-ERKGIRPNVVTYTA 230
Query: 600 LVKGCAQNHEAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSL 659
LV G + A+LL ++ + ++I V ++ ++ F K + +A++ + M +
Sbjct: 231 LVNGLCNSSRWSDAARLLSDMIK-KKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRM 289
Query: 660 GHLPNAQTFHSMVTG 674
P+ T+ S+V G
Sbjct: 290 SIDPDIVTYSSLVNG 304
>gi|302810233|ref|XP_002986808.1| hypothetical protein SELMODRAFT_41291 [Selaginella moellendorffii]
gi|300145462|gb|EFJ12138.1| hypothetical protein SELMODRAFT_41291 [Selaginella moellendorffii]
Length = 587
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 69/282 (24%), Positives = 126/282 (44%), Gaps = 30/282 (10%)
Query: 449 PTEKIYIKLVKAFLEAGKTKE-LTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQA 507
P + Y L++ ++AG+ L+ + A++ V+++ ALG C G LD
Sbjct: 70 PVARTYEALIRVVMDAGQCDTALSVYRAMADR----VTYNLVALG-----CCRSGRLDTC 120
Query: 508 HDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQS 567
++ EM G R S + SL+ +A R E +L +R + +C +A+ S
Sbjct: 121 VEIYQEMRSRGFRVSHLAFNSLVCGLCKAGRTDEAWDVLGKSRPS------ACADAVTLS 174
Query: 568 KIVQ----KDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEG 623
++ D AL L + M+ ++P + ++ C M LLQ++
Sbjct: 175 TVIHALCSSDCDRALELMRAMQAQRVPPNVVTYTSVIDGLCKAGRRDAAMV-LLQQM--- 230
Query: 624 QRIDCGVHD--WNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTG---YAAI 678
Q C + +N +IH CK ++DA L+ M S G P+ +++V+G +A +
Sbjct: 231 QAAGCSPNTVTYNCLIHSLCKAGKLEDAFALLRSMPSKGCTPSINNKNTLVSGICKHAIM 290
Query: 679 GGKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGF 720
+ E +L + S A S + +E+ L ++LYT + F
Sbjct: 291 ERQRREFGKLGQALFSEAMQESCSVEEDTL-ALLYTCLEHMF 331
Score = 42.7 bits (99), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 61/282 (21%), Positives = 125/282 (44%), Gaps = 22/282 (7%)
Query: 386 NCTNSVDLEN---SGIIENHILSYE--DFTKDRKFVALEA--EVKRVLQTLLGMLQKQVE 438
CT S++ +N SGI ++ I+ + +F K + + EA E V + L +L +E
Sbjct: 269 GCTPSINNKNTLVSGICKHAIMERQRREFGKLGQALFSEAMQESCSVEEDTLALLYTCLE 328
Query: 439 LITTEHGILQPTEKIYIKLVKAFLEAGKTKELTHF---LIKAEKENLQVSHDDAALGHVI 495
+ +G +P ++ Y ++ +A K E ++K + V+++ G
Sbjct: 329 HMFGSNGD-RPDKRTYSIVIHFLCKADKVLEAARVWRAMVKRLGQADAVTYNSFLYG--- 384
Query: 496 TLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQ 555
+ L L +A L E+ + + Y+ L+ AY +A +V + + A G++
Sbjct: 385 --LLKLNNLSEAARLFSEID----KPTLVSYSLLVHAYFKAGDLSKVEEVYQAATGQGLR 438
Query: 556 LDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAK 615
D + Y +L K G HL+ EM + + S + +L+ +++ +
Sbjct: 439 PDLALYNIVLHGLSGAKQEAGVAHLWAEMLNNGVSPS-VATYTILIHALCRDNRLQAARQ 497
Query: 616 LLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMR 657
++ ++K GQ + +N ++H CK L+ +A L+ M+
Sbjct: 498 IIDKMK-GQGVLPDAITYNTLLHCLCKNELLDEAHLLLREMK 538
>gi|115474441|ref|NP_001060817.1| Os08g0110200 [Oryza sativa Japonica Group]
gi|42408384|dbj|BAD09535.1| putative PPR protein [Oryza sativa Japonica Group]
gi|113622786|dbj|BAF22731.1| Os08g0110200 [Oryza sativa Japonica Group]
gi|125601950|gb|EAZ41275.1| hypothetical protein OsJ_25782 [Oryza sativa Japonica Group]
Length = 798
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 78/340 (22%), Positives = 126/340 (37%), Gaps = 46/340 (13%)
Query: 449 PTEKIYIKLVKAFLEAGKTKELTHFL--IKAEKENLQVSHDDAALGHVITLCISLGWLDQ 506
P Y L+K + ++++ H L + A+ D + VI + G LD+
Sbjct: 165 PNAFSYNILLKGLCDENRSQQALHLLHTMMADDTRGGCPPDVVSYTTVINGLLREGQLDK 224
Query: 507 AHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQ 566
A+ L DEM G+ + Y LL Y + +P+E + R G++ D Y L+
Sbjct: 225 AYCLFDEMLDQGMSPNCITYNCLLHGYCSSGKPKEAIGIFRKMCRDGVEPDVVTYNTLMV 284
Query: 567 SKIVQKDTPGALHLFKEM-KESKIPRSG------------------HQEFEMLVKGCAQ- 606
+ A +F M K+ P S HQ +++V+ Q
Sbjct: 285 YLCKNGRSMEARKVFDSMVKKGHKPDSSIYGTLLHGYATEGYLVQMHQLLDVMVRNGTQP 344
Query: 607 -----NHEAGLMAK-------LLQEVKEGQRIDCGVH----DWNNVIHFFCKKRLMQDAE 650
N G AK +L K Q+ G+H + V+ C+ + DA
Sbjct: 345 DHYIFNILIGAYAKHGMVDEAMLAFSKMRQQ---GLHPNIVTYGTVMDALCRVGKVDDAM 401
Query: 651 KALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEMKSFASSTSMNFDEELLDS 710
R+ S G PN F +++ G A K+ + EL EM + F LL+
Sbjct: 402 SQFDRLISEGLTPNGVVFRTLIHGLCAC-DKWDKAEELAVEMIGRGICPNTIFFNTLLNH 460
Query: 711 VLYTFVRGGFFARANEVVAMMEEGKMFIDKYKYRTLFLKY 750
+ + G RA + +M + D Y TL Y
Sbjct: 461 L----CKEGMVTRAKNIFDLMVRVDVQCDVITYTTLIDGY 496
Score = 41.2 bits (95), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 57/256 (22%), Positives = 97/256 (37%), Gaps = 49/256 (19%)
Query: 502 GWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQ------ 555
G+L Q H LLD M G + ++ L+ AY + E R G+
Sbjct: 325 GYLVQMHQLLDVMVRNGTQPDHYIFNILIGAYAKHGMVDEAMLAFSKMRQQGLHPNIVTY 384
Query: 556 ---LDASCYEALLQSKIVQKD-------TPGALHLFKEMKES-----KIPRSGHQEFEML 600
+DA C + + Q D TP + +F+ + K ++ EM+
Sbjct: 385 GTVMDALCRVGKVDDAMSQFDRLISEGLTPNGV-VFRTLIHGLCACDKWDKAEELAVEMI 443
Query: 601 VKGCAQNHEAGLMAKLLQEV-KEGQ------------RID--CGVHDWNNVIHFFCKKRL 645
+G N LL + KEG R+D C V + +I +C
Sbjct: 444 GRGICPN--TIFFNTLLNHLCKEGMVTRAKNIFDLMVRVDVQCDVITYTTLIDGYCLDGK 501
Query: 646 MQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEMKSFASSTSMNFDE 705
+ +A K L+ M G PN T+++++ GY G+ + L+ +M S + +
Sbjct: 502 VDEATKLLEGMVLDGVKPNEVTYNTIINGYCK-NGRIEDACSLFRQMASKGVNPGI---- 556
Query: 706 ELLDSVLYTFVRGGFF 721
V+Y+ + G F
Sbjct: 557 -----VIYSTILHGLF 567
>gi|145326646|ref|NP_001077770.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332196072|gb|AEE34193.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 806
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/251 (21%), Positives = 103/251 (41%), Gaps = 9/251 (3%)
Query: 444 HGILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGW 503
H + P Y ++ F + + + H +L S D +I +
Sbjct: 394 HRCIFPDTVTYNSMIYGFCKHNRFDDAKHMF------DLMASPDVVTFNTIIDVYCRAKR 447
Query: 504 LDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEA 563
+D+ LL E+ G+ A+++ Y +L+ + E + L ++ S G+ D
Sbjct: 448 VDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNI 507
Query: 564 LLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEG 623
LL + AL LF+ ++ SKI + +++ G + + L +
Sbjct: 508 LLYGFCENEKLEEALELFEVIQMSKIDLDT-VAYNIIIHGMCKGSKVDEAWDLFCSLPI- 565
Query: 624 QRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYT 683
++ V +N +I FC K + DA +M+ GH P+ T+++++ G G+
Sbjct: 566 HGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRG-CLKAGEID 624
Query: 684 EVTELWGEMKS 694
+ EL EM+S
Sbjct: 625 KSIELISEMRS 635
Score = 52.8 bits (125), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 53/236 (22%), Positives = 98/236 (41%), Gaps = 14/236 (5%)
Query: 499 ISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDA 558
+ G+L +A L D+M G+ + +L+ R E AL+ G+ +D
Sbjct: 203 VETGFL-EAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDV 261
Query: 559 SCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQ 618
Y ++ DT AL+L +M+E+ I ++ + C H + +
Sbjct: 262 VTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSE 321
Query: 619 EVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAI 678
+++G I V +N +I FC DA++ L+ M P+ TF+++++ +
Sbjct: 322 MLEKG--IAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISA-SVK 378
Query: 679 GGKYTEVTELWGEMKS---FASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMM 731
GK E +L EM F + + N S++Y F + F A + +M
Sbjct: 379 EGKLFEAEKLCDEMLHRCIFPDTVTYN-------SMIYGFCKHNRFDDAKHMFDLM 427
>gi|222628656|gb|EEE60788.1| hypothetical protein OsJ_14372 [Oryza sativa Japonica Group]
Length = 748
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 62/314 (19%), Positives = 135/314 (42%), Gaps = 17/314 (5%)
Query: 431 GMLQKQVELIT--TEHGILQPTEKIYIKLVKAFLEAGKT---KELTHFLIKAEKENLQVS 485
G L K ELI+ I P K + ++ + G+ K++ +++ + V+
Sbjct: 416 GELVKAKELISEMMNKDIPPPGVKYFSSIINNLFKEGRVAEGKDIMDLMVQTGQRPNVVT 475
Query: 486 HDDAALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTAL 545
+ G+ + +G +++A LLD M G+ + +Y +L+ Y + R + +
Sbjct: 476 FNSLMEGYCL-----VGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTV 530
Query: 546 LRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCA 605
RD G++ + Y +L + T A +F EM ES S Q + +++ G
Sbjct: 531 FRDMLHKGVKPTSVLYNIILHGLFQARRTTAAKKMFHEMIESGTTVS-IQTYGVVLGGLC 589
Query: 606 QNHEAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNA 665
+N+ A +L E + + +N VI K Q+A++ + + G +P
Sbjct: 590 RNNCTD-EANMLLEKLFAMNVKFDIITFNIVISAMLKVGRRQEAKELFAAISTYGLVPTV 648
Query: 666 QTFHSMVTGYAAIGGKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARAN 725
T++ M++ Y E L+ ++ + D LL+ ++ ++ A+A+
Sbjct: 649 HTYNLMISNLIK-EESYEEADNLFISVEKSGRAP----DSRLLNHIVRMLLKKAEVAKAS 703
Query: 726 EVVAMMEEGKMFID 739
+++++E + ++
Sbjct: 704 NYLSIIDENNLTLE 717
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/178 (21%), Positives = 76/178 (42%), Gaps = 1/178 (0%)
Query: 502 GWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCY 561
G + L++ M G+ + + L+ AY + + D ++ G+ D +
Sbjct: 311 GCFANMNSLVNLMVSKGIVPNHRFFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTF 370
Query: 562 EALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVK 621
++ S ALH F M + +P S + L++GC + E +L+ E+
Sbjct: 371 ATVISSLCRIGRLDDALHKFNHMVDIGVPPS-EAVYRCLIQGCCNHGELVKAKELISEMM 429
Query: 622 EGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIG 679
GV ++++I+ K+ + + + + M G PN TF+S++ GY +G
Sbjct: 430 NKDIPPPGVKYFSSIINNLFKEGRVAEGKDIMDLMVQTGQRPNVVTFNSLMEGYCLVG 487
Score = 46.6 bits (109), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 52/98 (53%), Gaps = 2/98 (2%)
Query: 597 FEMLVKGCAQNHEAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRM 656
+ L+ G ++ E +L ++ E Q + V +N++I CK + M +E+ L++M
Sbjct: 160 YNTLIDGFSKEGEVDKAYELFYKMIE-QSVSPDVVTYNSLIDGLCKTKEMVKSERVLEQM 218
Query: 657 RSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEMKS 694
G PN +T++S++ GY+ G + E ++ EM S
Sbjct: 219 VDAGIRPNNKTYNSLIYGYST-AGMWKESVRVFKEMSS 255
Score = 45.1 bits (105), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 68/312 (21%), Positives = 129/312 (41%), Gaps = 36/312 (11%)
Query: 227 IGYLFQDGRVDPRKKCNAPLI--AMKPNTNTFNIALAGCLLFETTRKAEQLLDIMPRIGV 284
I LF++GRV K ++ +PN TFN + G L +A LLD M IG+
Sbjct: 445 INNLFKEGRVAEGKDIMDLMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGI 504
Query: 285 KADSNLLIIMAHIYERNGRREE-LRKLQRHIDEAVNLSDIQFRQFYNCLLSCHLKFGDLN 343
+ + + + Y +NGR ++ L + + + V + + YN +L +
Sbjct: 505 EPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSV----LYNIILHGLFQARRTT 560
Query: 344 SASKMVLEMLQRAKEARNSLAAAMLPFNAVGVNNRTPSEQNVNCTNSVDLENSGIIENHI 403
+A KM EM++ S+ + + N NCT+ E ++
Sbjct: 561 AAKKMFHEMIESGTTV--SIQTYGVVLGGLCRN---------NCTD----------EANM 599
Query: 404 LSYEDFTKDRKFVALEAEVKRVLQTLLGMLQKQVELIT--TEHGILQPTEKIYIKLVKAF 461
L + F + KF + + +G Q+ EL + +G++ PT Y ++
Sbjct: 600 LLEKLFAMNVKFDIITFNIVISAMLKVGRRQEAKELFAAISTYGLV-PTVHTYNLMISNL 658
Query: 462 LEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQAHD---LLDEMHLAG 518
++ +E + I EK + D L H++ + + + +A + ++DE +L
Sbjct: 659 IKEESYEEADNLFISVEKSGR--APDSRLLNHIVRMLLKKAEVAKASNYLSIIDENNLTL 716
Query: 519 VRASSSVYASLL 530
++ S+ ASL
Sbjct: 717 EASTISLLASLF 728
Score = 42.4 bits (98), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 43/230 (18%), Positives = 92/230 (40%), Gaps = 7/230 (3%)
Query: 518 GVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQKDTPGA 577
G+ Y +L+ + + + L + D Y +L+ K+ +
Sbjct: 152 GLGPDVCSYNTLIDGFSKEGEVDKAYELFYKMIEQSVSPDVVTYNSLIDGLCKTKEMVKS 211
Query: 578 LHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRIDCGVHDWNNVI 637
+ ++M ++ I R ++ + L+ G + ++ +E+ I C V + N+ I
Sbjct: 212 ERVLEQMVDAGI-RPNNKTYNSLIYGYSTAGMWKESVRVFKEMSSSGLIPC-VVNCNSFI 269
Query: 638 HFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEMKSFAS 697
H C+ +++A+ M G PN ++ +++ GYAA G + + L M S
Sbjct: 270 HALCRHNRIKEAKDIFDSMVLKGPKPNIISYSTLLHGYAA-EGCFANMNSLVNLMVSKGI 328
Query: 698 STSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFIDKYKYRTLF 747
+ F L+++ + R G +A + M+ M D + T+
Sbjct: 329 VPNHRFFNILINA----YARCGMMDKAMLIFEDMQNKGMIPDTVTFATVI 374
>gi|302806733|ref|XP_002985098.1| hypothetical protein SELMODRAFT_121399 [Selaginella moellendorffii]
gi|300147308|gb|EFJ13973.1| hypothetical protein SELMODRAFT_121399 [Selaginella moellendorffii]
Length = 659
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/247 (22%), Positives = 107/247 (43%), Gaps = 15/247 (6%)
Query: 502 GWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCY 561
G +D+ H +L+ M Y++L+ Y +ANR ++ A+L GI D + Y
Sbjct: 421 GKVDEGHKVLELMKEVSCTPDVVTYSTLIDGYCKANRMQDAFAIL------GISPDKASY 474
Query: 562 EALLQSKIVQKDTPGALHLFKEM-KESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEV 620
++L+ A + M K+ P S H + +++ G K+LQ +
Sbjct: 475 SSMLEGLCSTGKVEEAQEVMDLMTKQGCPPTSSH--YALIIGGLCDVERGDEALKMLQVM 532
Query: 621 KEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGG 680
E + + ++ ++ +I+ CK + ++DA L M G +P+ T+ S++ G+ I
Sbjct: 533 SE-RGCEPNLYTYSILINGLCKTKRVEDAINVLDVMLEKGCVPDVATYTSLIDGFCKI-N 590
Query: 681 KYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFIDK 740
K + + M+ D+ + ++ F + G +A EV+ +M E D
Sbjct: 591 KMDAAYQCFKTMRDSGCEP----DKLAYNILISGFCQSGNVEKAIEVMQLMLEKGCNPDA 646
Query: 741 YKYRTLF 747
Y +L
Sbjct: 647 ATYFSLM 653
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 100/467 (21%), Positives = 188/467 (40%), Gaps = 79/467 (16%)
Query: 307 LRKLQRHIDEAVNLSDIQFRQ-------FYNCLLSCHLKFGDLNSASKMVLEMLQRAKEA 359
L + QR IDEA L D ++ YNCL++ K G +++A ++ ML+R
Sbjct: 102 LCQCQR-IDEAYQLLDEMIQKDCHPDAAVYNCLIAGLCKMGKIDAARNVLKMMLER---- 156
Query: 360 RNSLAAAMLPFNAVGVNNRTPSEQNVNCTNSVD--------LENSGIIENHILSYEDFTK 411
S ++ + ++ V TN++D ++ SG+ + +
Sbjct: 157 --SCVPDVITYTSLIVGCCQ--------TNALDEARKLMEKMKESGLTPDTVAYNALLNG 206
Query: 412 DRKFVALEAEVKRVLQTLLGMLQKQVELITTEHGILQPTEKIYIKLVKAFLEAGKTKELT 471
K LE EV ++L+ ++ E G +P Y +V E+GK +E
Sbjct: 207 LCKQNQLE-EVSKLLEEMV------------EAG-REPDTFSYNTVVACLCESGKYEEAG 252
Query: 472 HFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSV--YASL 529
L K ++ + D ++ + +D+A LL++M G R + +V Y +L
Sbjct: 253 KILEKMIEK--KCGPDVVTYNSLMDGFCKVSKMDEAERLLEDM--VGRRCAPTVITYTTL 308
Query: 530 LKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKI 589
+ + A+R + ++ D AGI D Y LL G L E+ E +
Sbjct: 309 IGGFSRADRLADAYRVMEDMFKAGISPDLVTYNCLLDGLC----KAGKLEEAHELLEVMV 364
Query: 590 PRSGHQE---FEMLVKGCAQNHEAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLM 646
+ + + +LV G + + A+LL E+ + + +N +I FCK +
Sbjct: 365 EKDCAPDVVTYSILVNGLCKLGKVD-DARLLLEMMLERGCQPNLVTFNTMIDGFCKAGKV 423
Query: 647 QDAEKALKRMRSLGHLPNAQTFHSMVTGYA---------AIGGKYTEVTELWGEMKSFAS 697
+ K L+ M+ + P+ T+ +++ GY AI G + ++ S
Sbjct: 424 DEGHKVLELMKEVSCTPDVVTYSTLIDGYCKANRMQDAFAILGISPDKASYSSMLEGLCS 483
Query: 698 STSMNFDEELLD----------SVLYTFVRGGF--FARANEVVAMME 732
+ + +E++D S Y + GG R +E + M++
Sbjct: 484 TGKVEEAQEVMDLMTKQGCPPTSSHYALIIGGLCDVERGDEALKMLQ 530
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 69/304 (22%), Positives = 122/304 (40%), Gaps = 21/304 (6%)
Query: 449 PTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVIT--LCISLGWLDQ 506
PT Y L+ + + E L + +++ H DAA+ + + LC +G +D
Sbjct: 90 PTAFTYCILIHGLCQCQRIDEAYQLLDEMIQKD---CHPDAAVYNCLIAGLC-KMGKIDA 145
Query: 507 AHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQ 566
A ++L M Y SL+ + N E L+ + +G+ D Y ALL
Sbjct: 146 ARNVLKMMLERSCVPDVITYTSLIVGCCQTNALDEARKLMEKMKESGLTPDTVAYNALLN 205
Query: 567 SKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGC--AQNHEAGLMAKLLQEVKEGQ 624
Q L +EM E+ ++ C + EAG K+L+++ E +
Sbjct: 206 GLCKQNQLEEVSKLLEEMVEAGREPDTFSYNTVVACLCESGKYEEAG---KILEKMIEKK 262
Query: 625 RIDCG--VHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKY 682
CG V +N+++ FCK M +AE+ L+ M P T+ +++ G++ +
Sbjct: 263 ---CGPDVVTYNSLMDGFCKVSKMDEAERLLEDMVGRRCAPTVITYTTLIGGFSR-ADRL 318
Query: 683 TEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFIDKYK 742
+ + +M S + LLD + G A+E++ +M E D
Sbjct: 319 ADAYRVMEDMFKAGISPDLVTYNCLLDG----LCKAGKLEEAHELLEVMVEKDCAPDVVT 374
Query: 743 YRTL 746
Y L
Sbjct: 375 YSIL 378
Score = 43.5 bits (101), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 50/246 (20%), Positives = 100/246 (40%), Gaps = 12/246 (4%)
Query: 448 QPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQA 507
QP + ++ F +AGK E H +++ KE + + D V+T + +A
Sbjct: 404 QPNLVTFNTMIDGFCKAGKVDE-GHKVLELMKE-VSCTPD------VVTYSTLIDGYCKA 455
Query: 508 HDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQS 567
+ + D + G+ + Y+S+L+ + E ++ G +S Y ++
Sbjct: 456 NRMQDAFAILGISPDKASYSSMLEGLCSTGKVEEAQEVMDLMTKQGCPPTSSHYALIIGG 515
Query: 568 KIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRID 627
+ AL + + M E + + + +L+ G + +L + E +
Sbjct: 516 LCDVERGDEALKMLQVMSERGCEPNLYT-YSILINGLCKTKRVEDAINVLDVMLEKGCVP 574
Query: 628 CGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGG--KYTEV 685
V + ++I FCK M A + K MR G P+ ++ +++G+ G K EV
Sbjct: 575 -DVATYTSLIDGFCKINKMDAAYQCFKTMRDSGCEPDKLAYNILISGFCQSGNVEKAIEV 633
Query: 686 TELWGE 691
+L E
Sbjct: 634 MQLMLE 639
Score = 42.4 bits (98), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 116/546 (21%), Positives = 214/546 (39%), Gaps = 69/546 (12%)
Query: 135 FVESLDSKWLEKAYGLVEQAFEEGKQILLEKEPLIYLSL--GLSKCGLPVPASTILRKLV 192
V + L++A L+E+ E G L + + Y +L GL K S +L ++V
Sbjct: 169 IVGCCQTNALDEARKLMEKMKESG----LTPDTVAYNALLNGLCKQNQLEEVSKLLEEMV 224
Query: 193 ATEQYPPVTAWSAILAHMSLTAPGAYLAAELILEIGYLFQDGRVDPRKKCNAPLIAMKPN 252
+ P +++ ++A L G Y A ILE KKC P+
Sbjct: 225 EAGREPDTFSYNTVVA--CLCESGKYEEAGKILEKMI---------EKKCG-------PD 266
Query: 253 TNTFNIALAGCLLFETTRKAEQLLDIMPRIGVKADSNLLIIMAHI--YERNGRREELRKL 310
T+N + G +AE+LL+ M +G + ++ I + R R + ++
Sbjct: 267 VVTYNSLMDGFCKVSKMDEAERLLEDM--VGRRCAPTVITYTTLIGGFSRADRLADAYRV 324
Query: 311 QRHIDEAVNLSDIQFRQFYNCLLSCHLKFGDLNSASKMVLEMLQRAKEARNSLAAAMLPF 370
+ +A D+ YNCLL K G L A ++ LE++ A + + ++L
Sbjct: 325 MEDMFKAGISPDLVT---YNCLLDGLCKAGKLEEAHEL-LEVMVEKDCAPDVVTYSILVN 380
Query: 371 NAVGVNNRTPSEQNVNCTNSVDLENSGIIENHILSYEDFTKDRKFVALEAEVKRVLQTLL 430
+ + + + + + N ++ + F K K E +VL+
Sbjct: 381 GLCKLGKVDDARLLLEMMLERGCQPNLVTFNTMI--DGFCKAGKV----DEGHKVLE--- 431
Query: 431 GMLQKQVELITTEHGILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAA 490
L K+V P Y L+ + +A + ++ F I L +S D A+
Sbjct: 432 --LMKEVSC--------TPDVVTYSTLIDGYCKANRMQD--AFAI------LGISPDKAS 473
Query: 491 LGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDAR 550
++ S G +++A +++D M G +SS YA ++ + R E +L+
Sbjct: 474 YSSMLEGLCSTGKVEEAQEVMDLMTKQGCPPTSSHYALIIGGLCDVERGDEALKMLQVMS 533
Query: 551 SAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESK-IPRSGHQEFEMLVKG-CAQNH 608
G + + Y L+ K A+++ M E +P + L+ G C N
Sbjct: 534 ERGCEPNLYTYSILINGLCKTKRVEDAINVLDVMLEKGCVPDVAT--YTSLIDGFCKINK 591
Query: 609 EAGLMAKLLQEVKEGQRIDCGVHD--WNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQ 666
M Q K + C +N +I FC+ ++ A + ++ M G P+A
Sbjct: 592 ----MDAAYQCFKTMRDSGCEPDKLAYNILISGFCQSGNVEKAIEVMQLMLEKGCNPDAA 647
Query: 667 TFHSMV 672
T+ S++
Sbjct: 648 TYFSLM 653
>gi|11079489|gb|AAG29201.1|AC078898_11 hypothetical protein [Arabidopsis thaliana]
Length = 481
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 77/171 (45%), Gaps = 38/171 (22%)
Query: 504 LDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEA 563
L++A D EM +G++A +V+ SL+ A+ +ANR + V +L++ +S G+ ++
Sbjct: 287 LEEAVDTFLEMERSGMKADVAVFNSLIGAFCKANRMKNVYRVLKEMKSKGVTPNSKSCNI 346
Query: 564 LLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEG 623
+L+ I + + A +F++M +K C + + M
Sbjct: 347 ILRHLIERGEKDEAFDVFRKM----------------IKVCEPDADTYTM---------- 380
Query: 624 QRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTG 674
VI FC+K+ M+ A+K K MR G P+ TF ++ G
Sbjct: 381 ------------VIKMFCEKKEMETADKVWKYMRKKGVFPSMHTFSVLING 419
>gi|297800058|ref|XP_002867913.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297313749|gb|EFH44172.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 724
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 80/178 (44%), Gaps = 37/178 (20%)
Query: 502 GWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCY 561
G D+A++L++ M G R + Y +++ + + +R E LL A S G++ D Y
Sbjct: 430 GNFDRAYELMNLMDDEGFRPNIYTYNAVIDSLCKKSRAPEAYELLNKAFSCGLEADGVTY 489
Query: 562 EALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVK 621
L+Q + Q D AL F M ++ G A +
Sbjct: 490 TILIQEQCKQSDIKQALAFFCRMNKT-----------------------GFEADM----- 521
Query: 622 EGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIG 679
R++ N +I FC+++ M+++E+ + + SLG +P +T+ SM++GY G
Sbjct: 522 ---RLN------NILIAAFCRQKKMKESERLFQLVVSLGLVPTKETYTSMISGYCKEG 570
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 70/309 (22%), Positives = 133/309 (43%), Gaps = 20/309 (6%)
Query: 444 HGILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGW 503
+G LQ ++ +++ F E G+ E ++ + + L S + V+ + I G
Sbjct: 163 NGNLQKAHEVMRCMLRNFSEIGRLNEAVGMVMDMQNQGL--SPSSITMNCVLEIAIESGL 220
Query: 504 LDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAG-IQLDASC-- 560
+D A ++ DEM + GV SS + ++ + +E L G I +A+C
Sbjct: 221 IDYAENVFDEMSVRGVCPDSSSFKLMVIGCFRDGKIQEADRWLSGMIQRGFIPDNATCTL 280
Query: 561 -YEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQE 619
AL ++ +V + A+ F++M + + F L+ G + ++L+E
Sbjct: 281 ILSALCENGLVNR----AIWYFRKMIDLGF-KPNLINFTSLIDGLCKKGSIKQAFEMLEE 335
Query: 620 -VKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKA-LKRMRSLGHLPNAQTFHSMVTGYAA 677
V+ G + + H +I CK+ + A + LK +RS + PN T+ SM+ GY
Sbjct: 336 MVRNGWKPNVYTH--TALIDGLCKRGWTEKAFRLFLKLVRSDIYKPNVHTYTSMIGGYCK 393
Query: 678 IGGKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMF 737
K L+ MK ++N L++ + G F RA E++ +M++
Sbjct: 394 -EDKLNRAEMLFSRMKEQGLFPNVNTYTTLING----HCKAGNFDRAYELMNLMDDEGFR 448
Query: 738 IDKYKYRTL 746
+ Y Y +
Sbjct: 449 PNIYTYNAV 457
>gi|242076206|ref|XP_002448039.1| hypothetical protein SORBIDRAFT_06g020090 [Sorghum bicolor]
gi|241939222|gb|EES12367.1| hypothetical protein SORBIDRAFT_06g020090 [Sorghum bicolor]
Length = 481
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 99/427 (23%), Positives = 162/427 (37%), Gaps = 74/427 (17%)
Query: 253 TNTFNIALAGCLLFETTRKAEQLLDIMPRIGVKADSNLLIIMAHIYERNGRREELRKLQR 312
T TFNI L +A +LL MPR + ++A R GR + ++ R
Sbjct: 116 TTTFNIMLRHLCATGKPVRALELLRQMPRPNAVTYNT---VIAGFCAR-GRVQAALEVMR 171
Query: 313 HIDEAVNLSDIQFRQFYNCLLSCHLKFGDLNSASKMVLEMLQRAKEARNSLAAAMLPFNA 372
+ E ++ ++ Y L+S K G + A+K+ EML + + A +++ +NA
Sbjct: 172 EMRERGGIAPDKYT--YATLISGWCKIGRMEDAAKVFDEMLTQGEVAPSAVM-----YNA 224
Query: 373 VGVNNRTPSEQNVNCTNSVDLENSGIIENHILSYEDFTKDRKFVALEAEVKRVLQTLLGM 432
+ I Y D K + LQ M
Sbjct: 225 L-----------------------------IGGYCDRGK----------LDVALQYREDM 245
Query: 433 LQKQVELITTEHGILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALG 492
+Q+ V + T Y LV A G+ + L + ++ L S D
Sbjct: 246 VQRGVAM----------TVATYNLLVHALFMDGRASDAYAVLEEMQRNGL--SPDVFTYN 293
Query: 493 HVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSA 552
+I G +A ++ +EM GVRA++ Y SL+ A+ + +E L + A
Sbjct: 294 ILINGYCKEGNEKKALEVFEEMSRKGVRATAVTYTSLIYAFSRKGQVQETDRLFKVAVKK 353
Query: 553 GIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGL 612
GI+ D Y AL+ S D A + EM++ +IP + L++G
Sbjct: 354 GIRPDVVMYNALINSHCAGGDMERAFEIMAEMEKKRIP-PDDVTYNTLIRGFCLLGRLDE 412
Query: 613 MAKLLQEV-KEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSM 671
L+ E+ K G + D G CK DAE +K M G P+ T+ S+
Sbjct: 413 ARGLIDEMTKRGIQPDLG----------LCKNGQGDDAENLMKEMVGKGITPDDSTYISL 462
Query: 672 VTGYAAI 678
+ G +
Sbjct: 463 IEGLTTV 469
Score = 43.5 bits (101), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 56/301 (18%), Positives = 116/301 (38%), Gaps = 44/301 (14%)
Query: 448 QPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQA 507
+P Y ++ F G+ + +++ +E ++ D +I+ +G ++ A
Sbjct: 144 RPNAVTYNTVIAGFCARGRVQAALE-VMREMRERGGIAPDKYTYATLISGWCKIGRMEDA 202
Query: 508 HDLLDEMHLAGVRASSSV-YASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQ 566
+ DEM G A S+V Y +L+ Y + + D G+ + + Y L+
Sbjct: 203 AKVFDEMLTQGEVAPSAVMYNALIGGYCDRGKLDVALQYREDMVQRGVAMTVATYNLLVH 262
Query: 567 SKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRI 626
+ + A + +EM+ R+G +
Sbjct: 263 ALFMDGRASDAYAVLEEMQ-----RNG--------------------------------L 285
Query: 627 DCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVT 686
V +N +I+ +CK+ + A + + M G A T+ S++ ++ G+ E
Sbjct: 286 SPDVFTYNILINGYCKEGNEKKALEVFEEMSRKGVRATAVTYTSLIYAFSR-KGQVQETD 344
Query: 687 ELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFIDKYKYRTL 746
L+ A + D + ++++ + GG RA E++A ME+ ++ D Y TL
Sbjct: 345 RLF----KVAVKKGIRPDVVMYNALINSHCAGGDMERAFEIMAEMEKKRIPPDDVTYNTL 400
Query: 747 F 747
Sbjct: 401 I 401
>gi|224059754|ref|XP_002299984.1| predicted protein [Populus trichocarpa]
gi|222847242|gb|EEE84789.1| predicted protein [Populus trichocarpa]
Length = 610
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 70/331 (21%), Positives = 138/331 (41%), Gaps = 48/331 (14%)
Query: 457 LVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQAHDLLDEMHL 516
+V A + GK ++ FL +E E + D +I G L++A ++++ M
Sbjct: 124 MVNALCKDGKFDDVKSFL--SEMEGNGIYADMVTYNTLIGAYCREGLLEEAFEIMNSMAD 181
Query: 517 AGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQKDTPG 576
G++ S Y +++ + R +L + + G+ D + Y LL + +
Sbjct: 182 KGLKPSLFTYNAIINGLCKKGRYARAKGILIEMLNIGLSPDTTTYNTLLVESCRRDNFSE 241
Query: 577 ALHLFKEM-KESKIP-------------RSGHQE--------------------FEMLVK 602
A +F EM ++ +P R+ H + + +L+
Sbjct: 242 AKEIFGEMLRQGVVPDLVSFSSLIAVFSRNRHLDQALVYFRDMKKFGLVPDNVIYTVLMH 301
Query: 603 GCAQNHEAGLMAKLLQEVKE-GQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGH 661
G +N K+ E+ E G +D V +N +++ CK++++ DA+K M G
Sbjct: 302 GYCRNGNMLEALKIRDEMLEQGCVLD--VIAYNTILNGLCKEKMLTDADKLFDEMVERGA 359
Query: 662 LPNAQTFHSMVTGYAAIGGKYTEVTELWGEMKSFASSTSMNFDEELL--DSVLYTFVRGG 719
LP+ TF +++ G+ G T+ L+G M T N +++ ++++ F + G
Sbjct: 360 LPDFYTFTTLIHGHCQ-DGNMTKALSLFGTM------TQRNIKPDIVAYNTLIDGFCKVG 412
Query: 720 FFARANEVVAMMEEGKMFIDKYKYRTLFLKY 750
+A+E+ M K+F + Y L Y
Sbjct: 413 EMEKASELWDGMISRKIFPNHITYGILINAY 443
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 57/245 (23%), Positives = 94/245 (38%), Gaps = 9/245 (3%)
Query: 504 LDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEA 563
LDQA +M G+ + +Y L+ Y E + + G LD Y
Sbjct: 274 LDQALVYFRDMKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYNT 333
Query: 564 LLQSKIVQKDTPGALHLFKEMKE-SKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKE 622
+L +K A LF EM E +P F L+ G Q+ L + +
Sbjct: 334 ILNGLCKEKMLTDADKLFDEMVERGALP--DFYTFTTLIHGHCQDGNMTKALSLFGTMTQ 391
Query: 623 GQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKY 682
+ I + +N +I FCK M+ A + M S PN T+ ++ Y ++ G
Sbjct: 392 -RNIKPDIVAYNTLIDGFCKVGEMEKASELWDGMISRKIFPNHITYGILINAYCSV-GHV 449
Query: 683 TEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFIDKYK 742
+E LW M ++ ++V+ + R G ++A+E + M + D
Sbjct: 450 SEAFRLWDVMIEKGIKPTL----VTCNTVIKGYCRSGDSSKADEFLGRMIAKGVAPDHIS 505
Query: 743 YRTLF 747
Y TL
Sbjct: 506 YNTLI 510
Score = 48.1 bits (113), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 77/442 (17%), Positives = 164/442 (37%), Gaps = 84/442 (19%)
Query: 247 IAMKPNTNTFNIALAGCLLFETTRKAEQLLDIMPRIGVKADSNLLIIMAHIYERNGRREE 306
I + P+T T+N L + +A+++ M R GV D + ++ RN
Sbjct: 217 IGLSPDTTTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLIAVFSRN----- 271
Query: 307 LRKLQRHIDEAVNLSDIQFRQ-----------FYNCLLSCHLKFGDLNSASKMVLEMLQR 355
RH+D+A+ + FR Y L+ + + G++ A K+ EML++
Sbjct: 272 -----RHLDQAL----VYFRDMKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQ 322
Query: 356 AKEARNSLAAAMLPFNAVGVNNRTPSEQNVNCTNSVDLENSGIIENHILSYEDFTKDRKF 415
++ +N + +N + T++ L + + + + FT
Sbjct: 323 G------CVLDVIAYNTI-LNGLCKEKM---LTDADKLFDEMVERGALPDFYTFTTLIHG 372
Query: 416 VALEAEVKRVLQTLLGMLQKQVELITTEHGILQPTEKIYIKLVKAFLEAGKTKELTHFLI 475
+ + + L M Q+ + +P Y L+ F + G+ ++ +
Sbjct: 373 HCQDGNMTKALSLFGTMTQRNI----------KPDIVAYNTLIDGFCKVGEMEKASELWD 422
Query: 476 KAEKENLQVSHDDAALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIE 535
+ +H G +I S+G + +A L D M G++ + +++K Y
Sbjct: 423 GMISRKIFPNH--ITYGILINAYCSVGHVSEAFRLWDVMIEKGIKPTLVTCNTVIKGYCR 480
Query: 536 ANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQ 595
+ + L + G+ D Y L+ + + + A +M++
Sbjct: 481 SGDSSKADEFLGRMIAKGVAPDHISYNTLINGFVREDNMDKAFLWINKMEKE-------- 532
Query: 596 EFEMLVKGCAQNHEAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKR 655
GL+ ++ +N V++ FC++ MQ+AE L++
Sbjct: 533 ---------------GLLPDIIT--------------YNVVMNGFCRQGRMQEAELVLRK 563
Query: 656 MRSLGHLPNAQTFHSMVTGYAA 677
M G P+ T+ +++ G+
Sbjct: 564 MIEKGINPDRSTYTALINGHVT 585
Score = 47.4 bits (111), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 47/229 (20%), Positives = 99/229 (43%), Gaps = 7/229 (3%)
Query: 525 VYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEM 584
V+ L++ Y++A + RE T R RS G + + +LL + A + +E+
Sbjct: 50 VFDLLIRTYVQARKLREGTEAFRILRSKGYLVSINACNSLLGGLVKIDWVELAWEVHREV 109
Query: 585 KESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKR 644
S I + + ++V ++ + + L E+ EG I + +N +I +C++
Sbjct: 110 VRSGIELNVYT-LNIMVNALCKDGKFDDVKSFLSEM-EGNGIYADMVTYNTLIGAYCREG 167
Query: 645 LMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEMKSFASSTSMNFD 704
L+++A + + M G P+ T+++++ G G+Y + EM + S D
Sbjct: 168 LLEEAFEIMNSMADKGLKPSLFTYNAIINGLCK-KGRYARAKGILIEMLNIGLSP----D 222
Query: 705 EELLDSVLYTFVRGGFFARANEVVAMMEEGKMFIDKYKYRTLFLKYHKT 753
+++L R F+ A E+ M + D + +L + +
Sbjct: 223 TTTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLIAVFSRN 271
>gi|224130702|ref|XP_002328355.1| predicted protein [Populus trichocarpa]
gi|222838070|gb|EEE76435.1| predicted protein [Populus trichocarpa]
Length = 608
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 82/188 (43%), Gaps = 13/188 (6%)
Query: 510 LLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKI 569
L ++M L GV + L+ N ++L GI AS + AL+
Sbjct: 110 LCNQMDLFGVTHNVYSLNVLINCLCRLNHVDFAVSILGKMFKLGIHPTASTFNALINGLC 169
Query: 570 VQKDTPGALHLFKEMKESKIPRSGHQ----EFEMLVKGCAQNHEAGLMAKLLQEVKE-GQ 624
+ A+ LF EM R GH+ + ++ G + + + +++++ G
Sbjct: 170 NEGKIKEAVELFNEM-----VRRGHEPNVISYNTIINGLCKTGNTSMAVDVFKKMEQNGC 224
Query: 625 RIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTE 684
+ D V +N +I CK RL+ DA + L M G PN T++ MV G+ + G+ E
Sbjct: 225 KPD--VVTYNTIIDSLCKDRLVNDAMEFLSEMLDRGIPPNVFTYNCMVHGFCIL-GQLNE 281
Query: 685 VTELWGEM 692
T L+ EM
Sbjct: 282 ATRLFKEM 289
Score = 58.9 bits (141), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 100/227 (44%), Gaps = 22/227 (9%)
Query: 504 LDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEA 563
+D+A LL EM+ + + Y++L++ + RP+E + ++ S G+ + Y
Sbjct: 384 MDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQFGRPKEALNIFKEMCSYGLLPNLVTYSI 443
Query: 564 LLQSKIVQKDTPGALHLFKEMKESKI-PRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKE 622
LL AL L K M+E K+ P H +L++G +A L+ KE
Sbjct: 444 LLDGFCKHGHLDEALKLLKSMQEKKLEPNIVHH--TILIEGM-------FIAGKLEVAKE 494
Query: 623 ------GQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYA 676
I + + +I K+ L +A ++M G LPN+ +++ M+ G+
Sbjct: 495 LFSKLFADGIRPTIRTYTVMIKGLLKEGLSDEAYDLFRKMEDDGFLPNSCSYNVMIQGFL 554
Query: 677 AIGGKYTEVTELWGEM--KSFASSTS---MNFDEELLDSVLYTFVRG 718
T + L EM K F+++ S M D E D ++ F+RG
Sbjct: 555 QNQDSSTAI-RLIDEMVGKRFSANLSTFQMLLDLESQDEIISQFMRG 600
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 67/325 (20%), Positives = 119/325 (36%), Gaps = 44/325 (13%)
Query: 447 LQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGH--VITLCISLGWL 504
+ PT + L+ GK KE E ++ H+ + + +I G
Sbjct: 154 IHPTASTFNALINGLCNEGKIKEAVELF----NEMVRRGHEPNVISYNTIINGLCKTGNT 209
Query: 505 DQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEAL 564
A D+ +M G + Y +++ + + + L + GI + Y +
Sbjct: 210 SMAVDVFKKMEQNGCKPDVVTYNTIIDSLCKDRLVNDAMEFLSEMLDRGIPPNVFTYNCM 269
Query: 565 LQSKIVQKDTPGALHLFKEM--------------------KESKIPRSGHQEFEMLVKGC 604
+ + A LFKEM KE + + M KG
Sbjct: 270 VHGFCILGQLNEATRLFKEMVGRDVMPDTVTLTILVDGLCKEGMVSEARLVFETMTEKGV 329
Query: 605 AQN-------HEAGLMAKLLQEVKEGQRI----DC--GVHDWNNVIHFFCKKRLMQDAEK 651
N + + +L+ E K+ I C GVH +N +I+ FCK R M +A+
Sbjct: 330 EPNISTYNALMDGYCLQRLMNEAKKVFEIMIRQGCAPGVHSYNILINGFCKSRRMDEAKS 389
Query: 652 ALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEMKSFASSTSMNFDEELLDSV 711
L M P+ T+ +++ G G+ E ++ EM S+ ++ LLD
Sbjct: 390 LLAEMYHKALNPDTVTYSTLMQGLCQF-GRPKEALNIFKEMCSYGLLPNLVTYSILLDG- 447
Query: 712 LYTFVRGGFFARANEVVAMMEEGKM 736
F + G A +++ M+E K+
Sbjct: 448 ---FCKHGHLDEALKLLKSMQEKKL 469
>gi|125535814|gb|EAY82302.1| hypothetical protein OsI_37513 [Oryza sativa Indica Group]
Length = 578
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 62/272 (22%), Positives = 114/272 (41%), Gaps = 18/272 (6%)
Query: 483 QVSHDDAALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIE---ANRP 539
+VS D VI+ +G L +A D+ ++ G+ S + Y SL+ Y + A
Sbjct: 186 RVSPDIYTFNTVISGLCRIGQLRKAGDVAKDIKAWGLAPSVATYNSLIDGYCKKGGAGNM 245
Query: 540 REVTALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEM 599
V LL++ AGI A + L+ +T A+ +F+EMK+ I S +
Sbjct: 246 YHVDMLLKEMVEAGISPTAVTFGVLINGYCKNSNTAAAVRVFEEMKQQGIAAS-VVTYNS 304
Query: 600 LVKGCAQNHEAGLMAKLLQEVKEGQRIDCGVH----DWNNVIHFFCKKRLMQDAEKALKR 655
L+ G + KL++E++ D G+ + V+ FCKK +M DA +
Sbjct: 305 LISGLCSEGKVEEGVKLMEEME-----DLGLSPNEITFGCVLKGFCKKGMMADANDWIDG 359
Query: 656 MRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTF 715
M P+ + ++ GY +G + +K + ++ + + ++ F
Sbjct: 360 MTERNVEPDVVIYTILIDGYRRLGKMEDAMA-----VKEAMAKKGISPNVTTYNCLITGF 414
Query: 716 VRGGFFARANEVVAMMEEGKMFIDKYKYRTLF 747
R G + A+ ++ M+E + D Y L
Sbjct: 415 SRSGDWRSASGLLDEMKEKGIEADVVTYNVLI 446
Score = 52.8 bits (125), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 49/229 (21%), Positives = 94/229 (41%), Gaps = 6/229 (2%)
Query: 447 LQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQ 506
L P E + ++K F + G + ++ + N V D +I LG ++
Sbjct: 330 LSPNEITFGCVLKGFCKKGMMADANDWIDGMTERN--VEPDVVIYTILIDGYRRLGKMED 387
Query: 507 AHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQ 566
A + + M G+ + + Y L+ + + R + LL + + GI+ D Y L+
Sbjct: 388 AMAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIG 447
Query: 567 SKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKG-CAQNHEAGLMAKLLQEVKEGQR 625
+ + + A+ L EM E + H + +++G C + + A ++ E R
Sbjct: 448 ALCCKGEVRKAVKLLDEMSEVGL-EPNHLTYNTIIQGFCDKGNIKS--AYEIRTRMEKCR 504
Query: 626 IDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTG 674
V +N I +FC+ M +A L M +PN T+ ++ G
Sbjct: 505 KRANVVTYNVFIKYFCQIGKMDEANDLLNEMLDKCLVPNGITYETIKEG 553
Score = 46.6 bits (109), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 50/226 (22%), Positives = 81/226 (35%), Gaps = 39/226 (17%)
Query: 454 YIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQAHDLLDE 513
Y L+ GK +E + E E+L +S ++ G V+ G + A+D +D
Sbjct: 302 YNSLISGLCSEGKVEEGVKLM--EEMEDLGLSPNEITFGCVLKGFCKKGMMADANDWIDG 359
Query: 514 MHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQKD 573
M V +Y L+ Y + + A+ GI + + Y L+ D
Sbjct: 360 MTERNVEPDVVIYTILIDGYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSGD 419
Query: 574 TPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRIDCGVHDW 633
A L EMKE KG I+ V +
Sbjct: 420 WRSASGLLDEMKE---------------KG----------------------IEADVVTY 442
Query: 634 NNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIG 679
N +I C K ++ A K L M +G PN T+++++ G+ G
Sbjct: 443 NVLIGALCCKGEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKG 488
Score = 40.4 bits (93), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 56/269 (20%), Positives = 98/269 (36%), Gaps = 62/269 (23%)
Query: 247 IAMKPNTNTFNIALAGCLLFETTRKAEQLLDIMPRIGVKADSNLLIIMAHIYERNGRREE 306
+ + PN TF L G A +D M V+ D + I+ Y R G+ E+
Sbjct: 328 LGLSPNEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYTILIDGYRRLGKMED 387
Query: 307 LRKLQRHIDEAVNLSDIQFR-QFYNCLLSCHLKFGDLNSASKMVLEMLQRAKEARNSLAA 365
+ EA+ I YNCL++ + GD SAS ++ EM ++
Sbjct: 388 ----AMAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKG--------- 434
Query: 366 AMLPFNAVGVNNRTPSEQNVNCTNSVDLENSGIIENHILSYEDFTKDRKFVALEAEVKRV 425
IE +++Y + + EV++
Sbjct: 435 ---------------------------------IEADVVTYNVLI---GALCCKGEVRKA 458
Query: 426 LQTLLGMLQKQVELITTEHGILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVS 485
++ L M +E G L+P Y +++ F + G K + + I+ E +
Sbjct: 459 VKLLDEM---------SEVG-LEPNHLTYNTIIQGFCDKGNIK--SAYEIRTRMEKCRKR 506
Query: 486 HDDAALGHVITLCISLGWLDQAHDLLDEM 514
+ I +G +D+A+DLL+EM
Sbjct: 507 ANVVTYNVFIKYFCQIGKMDEANDLLNEM 535
>gi|13872949|dbj|BAB44054.1| hypothetical protein [Oryza sativa Japonica Group]
Length = 909
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/255 (23%), Positives = 102/255 (40%), Gaps = 19/255 (7%)
Query: 504 LDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEA 563
D A L EM G+ + YA L+ A + + L R GI++ Y +
Sbjct: 377 FDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRDKGIKVTVYPYNS 436
Query: 564 LLQSKIVQKDTPGALHLFKEM-KESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKE 622
L+ Q A L M KE P + + L+ G +N + +L +E+ E
Sbjct: 437 LINGYCKQGSLDRARGLLSGMVKEGLTPTAA--SYSPLIAGLCRNGDLSSCMELHREMAE 494
Query: 623 GQRIDCGVHDWNN-----VIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAA 677
G+ WNN +I+ FCK + M +A + +M +PN TF+ M+ GY
Sbjct: 495 R-----GIA-WNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGYCL 548
Query: 678 IGGKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMF 737
+ G + +L+ +M + D S++ ++ANE VA +E
Sbjct: 549 V-GNIRKAFQLYDQMVEMG----LKPDNYTYRSLISGLCLTSGVSKANEFVADLENSYAV 603
Query: 738 IDKYKYRTLFLKYHK 752
++ + L + +
Sbjct: 604 LNNFSLTALLYGFFR 618
Score = 56.2 bits (134), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 50/220 (22%), Positives = 96/220 (43%), Gaps = 7/220 (3%)
Query: 502 GWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCY 561
G ++ A L D+M G++ + Y SL+ Y + LL G+ A+ Y
Sbjct: 410 GMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASY 469
Query: 562 EALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVK 621
L+ D + L +EM E I + + F L+ G ++ + A+L ++
Sbjct: 470 SPLIAGLCRNGDLSSCMELHREMAERGIAWNNYT-FTALINGFCKDKKMDEAARLFDKMI 528
Query: 622 EGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGK 681
+ I V +N +I +C ++ A + +M +G P+ T+ S+++G G
Sbjct: 529 DSNVIPNEV-TFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSG- 586
Query: 682 YTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFF 721
++ E ++++ + + NF L ++LY F R G F
Sbjct: 587 VSKANEFVADLEN-SYAVLNNFS---LTALLYGFFREGRF 622
Score = 42.7 bits (99), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 109/543 (20%), Positives = 209/543 (38%), Gaps = 68/543 (12%)
Query: 242 CNAPLIAMKPNTNTFNIALAGCLLFETTRKAEQLLDIMPRIGVKADSNLLIIMAHIYERN 301
C + M PN +N + E A++L M G++ + I+ H +
Sbjct: 350 CKLGDLGMVPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKR 409
Query: 302 GRREE-LRKLQRHIDEAVNLSDIQFRQFYNCLLSCHLKFGDLNSASKMVLEMLQRAKEAR 360
G E+ L + D+ + ++ YN L++ + K G L+ A ++ M+ KE
Sbjct: 410 GMIEDALCLFDKMRDKGIKVTVYP----YNSLINGYCKQGSLDRARGLLSGMV---KEGL 462
Query: 361 NSLAAAMLPFNAVGVNNRTPSEQNVNCTN-SVDLENSGIIENHILS---YEDFTKDRKFV 416
AA+ P A N S +C ++ GI N+ F KD+K
Sbjct: 463 TPTAASYSPLIAGLCRNGDLS----SCMELHREMAERGIAWNNYTFTALINGFCKDKKM- 517
Query: 417 ALEAEVKRVLQTLLGMLQKQVELITTEHGILQPTEKIYIKLVKAFLEAGKTKELTHFLIK 476
E R+ M+ V P E + +++ + G ++ F +
Sbjct: 518 ---DEAARLFDK---MIDSNV----------IPNEVTFNVMIEGYCLVGNIRK--AFQLY 559
Query: 477 AEKENLQVSHDDAALGHVIT-LCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIE 535
+ + + D+ +I+ LC++ G + +A++ + ++ + ++ +LL +
Sbjct: 560 DQMVEMGLKPDNYTYRSLISGLCLTSG-VSKANEFVADLENSYAVLNNFSLTALLYGFFR 618
Query: 536 ANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQ 595
R E L + G++LD + ++ + + Q D + LF+EMKE + +
Sbjct: 619 EGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQGV-KPDDI 677
Query: 596 EFEMLVKGCAQNHEAGLMAKL---LQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKA 652
+ ++ A + E ++ L Q V +G + H +I+ CK + AE
Sbjct: 678 FYTCMID--ALSKEENMIQALNCWDQMVVDGYSPNTVTH--TVLINNLCKSGYLGSAELL 733
Query: 653 LKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEM--KSFASSTSMNFDEELLDS 710
K M + LPN T++ + Y A G + +L M AS S N
Sbjct: 734 CKEMLAGNVLPNKFTYNCFLD-YFATEGDMEKAKDLHSAMLQGHLASIVSFNI------- 785
Query: 711 VLYTFVRGGFFARANEVVAMMEEGKMFIDKYKYRTL-------------FLKYHKTLYKG 757
++ + G A ++++ + E D Y T+ F +++ LYKG
Sbjct: 786 LIKGLCKAGKIQEAIDLMSKITESGFSPDCISYSTIIHELCKMGDINKAFELWNEMLYKG 845
Query: 758 KTP 760
P
Sbjct: 846 LKP 848
>gi|115434588|ref|NP_001042052.1| Os01g0153200 [Oryza sativa Japonica Group]
gi|113531583|dbj|BAF03966.1| Os01g0153200 [Oryza sativa Japonica Group]
Length = 1139
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/255 (23%), Positives = 102/255 (40%), Gaps = 19/255 (7%)
Query: 504 LDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEA 563
D A L EM G+ + YA L+ A + + L R GI++ Y +
Sbjct: 354 FDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRDKGIKVTVYPYNS 413
Query: 564 LLQSKIVQKDTPGALHLFKEM-KESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKE 622
L+ Q A L M KE P + + L+ G +N + +L +E+ E
Sbjct: 414 LINGYCKQGSLDRARGLLSGMVKEGLTPTAA--SYSPLIAGLCRNGDLSSCMELHREMAE 471
Query: 623 GQRIDCGVHDWNN-----VIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAA 677
G+ WNN +I+ FCK + M +A + +M +PN TF+ M+ GY
Sbjct: 472 R-----GIA-WNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGYCL 525
Query: 678 IGGKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMF 737
+ G + +L+ +M + D S++ ++ANE VA +E
Sbjct: 526 V-GNIRKAFQLYDQMVEMG----LKPDNYTYRSLISGLCLTSGVSKANEFVADLENSYAV 580
Query: 738 IDKYKYRTLFLKYHK 752
++ + L + +
Sbjct: 581 LNNFSLTALLYGFFR 595
Score = 55.8 bits (133), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 50/220 (22%), Positives = 96/220 (43%), Gaps = 7/220 (3%)
Query: 502 GWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCY 561
G ++ A L D+M G++ + Y SL+ Y + LL G+ A+ Y
Sbjct: 387 GMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASY 446
Query: 562 EALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVK 621
L+ D + L +EM E I + + F L+ G ++ + A+L ++
Sbjct: 447 SPLIAGLCRNGDLSSCMELHREMAERGIAWNNYT-FTALINGFCKDKKMDEAARLFDKMI 505
Query: 622 EGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGK 681
+ I V +N +I +C ++ A + +M +G P+ T+ S+++G G
Sbjct: 506 DSNVIPNEV-TFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSG- 563
Query: 682 YTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFF 721
++ E ++++ + + NF L ++LY F R G F
Sbjct: 564 VSKANEFVADLEN-SYAVLNNFS---LTALLYGFFREGRF 599
Score = 44.3 bits (103), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 109/543 (20%), Positives = 209/543 (38%), Gaps = 68/543 (12%)
Query: 242 CNAPLIAMKPNTNTFNIALAGCLLFETTRKAEQLLDIMPRIGVKADSNLLIIMAHIYERN 301
C + M PN +N + E A++L M G++ + I+ H +
Sbjct: 327 CKLGDLGMVPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKR 386
Query: 302 GRREE-LRKLQRHIDEAVNLSDIQFRQFYNCLLSCHLKFGDLNSASKMVLEMLQRAKEAR 360
G E+ L + D+ + ++ YN L++ + K G L+ A ++ M+ KE
Sbjct: 387 GMIEDALCLFDKMRDKGIKVTVYP----YNSLINGYCKQGSLDRARGLLSGMV---KEGL 439
Query: 361 NSLAAAMLPFNAVGVNNRTPSEQNVNCTN-SVDLENSGIIENHILS---YEDFTKDRKFV 416
AA+ P A N S +C ++ GI N+ F KD+K
Sbjct: 440 TPTAASYSPLIAGLCRNGDLS----SCMELHREMAERGIAWNNYTFTALINGFCKDKKM- 494
Query: 417 ALEAEVKRVLQTLLGMLQKQVELITTEHGILQPTEKIYIKLVKAFLEAGKTKELTHFLIK 476
E R+ M+ V P E + +++ + G ++ F +
Sbjct: 495 ---DEAARLFDK---MIDSNV----------IPNEVTFNVMIEGYCLVGNIRK--AFQLY 536
Query: 477 AEKENLQVSHDDAALGHVIT-LCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIE 535
+ + + D+ +I+ LC++ G + +A++ + ++ + ++ +LL +
Sbjct: 537 DQMVEMGLKPDNYTYRSLISGLCLTSG-VSKANEFVADLENSYAVLNNFSLTALLYGFFR 595
Query: 536 ANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQ 595
R E L + G++LD + ++ + + Q D + LF+EMKE + +
Sbjct: 596 EGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQGV-KPDDI 654
Query: 596 EFEMLVKGCAQNHEAGLMAKL---LQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKA 652
+ ++ A + E ++ L Q V +G + H +I+ CK + AE
Sbjct: 655 FYTCMID--ALSKEENMIQALNCWDQMVVDGYSPNTVTH--TVLINNLCKSGYLGSAELL 710
Query: 653 LKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEM--KSFASSTSMNFDEELLDS 710
K M + LPN T++ + Y A G + +L M AS S N
Sbjct: 711 CKEMLAGNVLPNKFTYNCFLD-YFATEGDMEKAKDLHSAMLQGHLASIVSFNI------- 762
Query: 711 VLYTFVRGGFFARANEVVAMMEEGKMFIDKYKYRTL-------------FLKYHKTLYKG 757
++ + G A ++++ + E D Y T+ F +++ LYKG
Sbjct: 763 LIKGLCKAGKIQEAIDLMSKITESGFSPDCISYSTIIHELCKMGDINKAFELWNEMLYKG 822
Query: 758 KTP 760
P
Sbjct: 823 LKP 825
>gi|125557843|gb|EAZ03379.1| hypothetical protein OsI_25524 [Oryza sativa Indica Group]
Length = 716
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/256 (21%), Positives = 120/256 (46%), Gaps = 14/256 (5%)
Query: 452 KIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQAHDLL 511
+ Y +V F ++GK + L + +++ +Q + A G ++ + LD+A+ L
Sbjct: 465 RAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTV--ATYGAIVDGLAKIDRLDEAYMLF 522
Query: 512 DEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQ 571
+E G+ + +Y+SL+ + + R E +L + G+ + + +LL + +
Sbjct: 523 EEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLLDALVKA 582
Query: 572 KDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRIDCGVH 631
++ AL F+ MKE K P + + + +L+ G + + Q++++ Q + V
Sbjct: 583 EEINEALVCFQSMKEMKCPPNTYT-YSILINGLCRVQKYNKAFVFWQDMQK-QGLVPNVV 640
Query: 632 DWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYA----AIGGKYTEVTE 687
+ +I K + DA +R ++ G +P+A +F++++ G + A+ T V +
Sbjct: 641 TYTTMISGLAKVGNITDAYSLFERFKANGGIPDAASFNALIEGMSNANRAMEAYQTTVYQ 700
Query: 688 LWGEMKSFASSTSMNF 703
L +SS S NF
Sbjct: 701 LS------SSSCSWNF 710
Score = 49.3 bits (116), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 55/245 (22%), Positives = 100/245 (40%), Gaps = 13/245 (5%)
Query: 447 LQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQ 506
L+P +Y + F +AG F + + + L+ DD + +I + G L +
Sbjct: 111 LEPDIVLYNVCIDCFGKAGNVDMACKFFHELKAQGLK--PDDVSYTSMIWVLCKAGRLGE 168
Query: 507 AHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQ 566
A +L +M + Y +++ Y A R + LL R G + ++L
Sbjct: 169 AEELFAQMEAERSVPCAYAYNTMIMGYGSAGRFEDAYKLLERLRERGCIPSVVSFNSILT 228
Query: 567 SKIVQKDTPGALHLFKEMKESKIPRSGHQE--FEMLVKGCAQNHEAGLMAKLLQEVKEGQ 624
++ AL LF+ MK+ P S +ML G + EA ++L E++
Sbjct: 229 CLGKKRKVDEALSLFEVMKKDAEPNSSTYNIIIDMLCLG-GRVEEA---YRILDEMEHAS 284
Query: 625 RIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTE 684
+ N ++ CK R +++A K + G P+ T+ S++ G GK +
Sbjct: 285 LFP-NLLTVNIMVDRLCKARKLEEAYKIFESASQRGCNPDCVTYCSLIDGL----GKKGQ 339
Query: 685 VTELW 689
V E +
Sbjct: 340 VDEAY 344
Score = 48.9 bits (115), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 40/176 (22%), Positives = 74/176 (42%), Gaps = 2/176 (1%)
Query: 504 LDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEA 563
LD A + M R + S Y L+ A EA RP LLR + G ++ +
Sbjct: 26 LDDAVLAVAVMRRLKFRPAFSAYTVLIGALAEARRPERALELLRQMQEVGYEVGVHLFTT 85
Query: 564 LLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEG 623
L+++ + AL L E+K S + + + + + + K E+K
Sbjct: 86 LVRALAREGQVADALALVDEVKGSCL-EPDIVLYNVCIDCFGKAGNVDMACKFFHELK-A 143
Query: 624 QRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIG 679
Q + + ++I CK + +AE+ +M + +P A +++M+ GY + G
Sbjct: 144 QGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIMGYGSAG 199
Score = 48.1 bits (113), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 51/235 (21%), Positives = 101/235 (42%), Gaps = 16/235 (6%)
Query: 502 GWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCY 561
G +D+A+ L ++M AG A+ VY SL++ + R + + ++ G + D +
Sbjct: 338 GQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGHKVFKELIRRGCKPDLTLL 397
Query: 562 EALLQSKIVQKDTPGALHLFKEMKESK-IPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEV 620
+ + +F++++ +P + + +L+ G + +A + + +
Sbjct: 398 NTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDV--RSYSILIHGLTKAGQARETSNIFHAM 455
Query: 621 KEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGG 680
K+ Q +N V+ FCK + A + L+ M+ P T+ ++V G A I
Sbjct: 456 KQ-QGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIVDGLAKI-D 513
Query: 681 KYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGF--FARANEVVAMMEE 733
+ E L+ E KS L+ VLY+ + GF R +E ++EE
Sbjct: 514 RLDEAYMLFEEAKSKGIE---------LNVVLYSSLIDGFGKVGRIDEAYLILEE 559
Score = 45.1 bits (105), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 49/220 (22%), Positives = 91/220 (41%), Gaps = 4/220 (1%)
Query: 453 IYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQAHDLLD 512
+Y L++ F G+ KE H + K E D L + G +++ + +
Sbjct: 361 VYTSLIRNFFIHGR-KEDGHKVFK-ELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFE 418
Query: 513 EMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQK 572
++ G Y+ L+ +A + RE + + + G LDA Y A++
Sbjct: 419 DIRSYGFLPDVRSYSILIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSG 478
Query: 573 DTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRIDCGVHD 632
A + +EMKE K + + +V G A+ L +E K + I+ V
Sbjct: 479 KVHKAYEILEEMKE-KCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKS-KGIELNVVL 536
Query: 633 WNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMV 672
++++I F K + +A L+ M G PN T++S++
Sbjct: 537 YSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLL 576
>gi|302772597|ref|XP_002969716.1| hypothetical protein SELMODRAFT_92207 [Selaginella moellendorffii]
gi|300162227|gb|EFJ28840.1| hypothetical protein SELMODRAFT_92207 [Selaginella moellendorffii]
Length = 457
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 86/190 (45%), Gaps = 5/190 (2%)
Query: 504 LDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEA 563
+D+A +LL+EM G + + Y SLL + + +E L G D Y
Sbjct: 103 VDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGKLKEAVDLFSRMVYRGCPPDGVVYNV 162
Query: 564 LLQSKIVQKDTPGALHLFKEMKESK-IPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKE 622
L+ + D A LF+EM E IP + L+ G ++ E G + L +++
Sbjct: 163 LIDGFSKKGDMGEAYRLFEEMLEKGCIPTV--FTYNSLLSGFSRKGEFGRVQSLFKDMLR 220
Query: 623 GQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKY 682
Q + +NN++ FCK M +A + MRSLG P+ ++++++ G + GK
Sbjct: 221 -QGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLGCPPDVVSYNTLMRGMCS-KGKP 278
Query: 683 TEVTELWGEM 692
E L EM
Sbjct: 279 HEAQRLLREM 288
>gi|302806388|ref|XP_002984944.1| hypothetical protein SELMODRAFT_121294 [Selaginella moellendorffii]
gi|300147530|gb|EFJ14194.1| hypothetical protein SELMODRAFT_121294 [Selaginella moellendorffii]
Length = 468
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 78/359 (21%), Positives = 147/359 (40%), Gaps = 39/359 (10%)
Query: 425 VLQTLL--GMLQKQVELI-TTEHGILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKEN 481
V+Q+L GML + +E+ T + P+ Y L+ + AG+ + L ++ K
Sbjct: 16 VVQSLAKAGMLAQALEVFETMKSESCVPSLVTYNVLINSRCNAGEFGKALD-LFQSMKRE 74
Query: 482 LQVSHDDAALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPRE 541
+V D +I+ S G + A LL EM + A+ Y+S++K+ ++ +P E
Sbjct: 75 KRVEPDRWTYNTLISGLCSSGNTEGARKLLSEMRDKNIAANVFTYSSIIKSLVKEAKPEE 134
Query: 542 VTALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLV 601
+L + +AG D + ++Q + A +++ M ES + + + +L+
Sbjct: 135 SYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEKAREVYQHMVESGY-KPDNVSYHILI 193
Query: 602 KGCAQNHEAGLMAKLLQEVK-EGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLG 660
G A+ + K+L E+ V ++ +IH C+ ++ A + M G
Sbjct: 194 HGLAKIGKLDESLKILSEMAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLEAG 253
Query: 661 HLPNAQTFHSMVTGYAAIGGKYTEVTELWGEMK----------------SFASSTSMNFD 704
PN T+ +++ G K + EL+ +M + SM+
Sbjct: 254 CKPNKYTYTTLIAGLCR-AEKVIQARELFEKMTQACIPPDAVAYNSLIAGYCKRGSMDEA 312
Query: 705 EEL----------------LDSVLYTFVRGGFFARANEVVAMMEEGKMFIDKYKYRTLF 747
E+L ++++ F + G RANE+VA M + D YR L
Sbjct: 313 EKLYREMSGGAGLQPTIVTFNTLIDGFCKLGKLGRANELVAEMGTKGLAADTCTYRILI 371
Score = 42.4 bits (98), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 61/263 (23%), Positives = 107/263 (40%), Gaps = 31/263 (11%)
Query: 94 SAEIENAINEHRYGDAWKLYEQHMQMDGFPRKTLVNKILTSFVESLDSKWLEKAYGLVEQ 153
S+ I++ + E + +++K+ E+ M P N ++ F S + +EKA + +
Sbjct: 120 SSIIKSLVKEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNN---MEKAREVYQH 176
Query: 154 AFEEG-KQILLEKEPLIYLSLGLSKCGLPVPASTILRKLV--ATEQYPPVTAWSAILAHM 210
E G K + LI+ GL+K G + IL ++ A P V +S ++ +
Sbjct: 177 MVESGYKPDNVSYHILIH---GLAKIGKLDESLKILSEMAMRAAGYVPNVITFSTLIHGL 233
Query: 211 SLTAPGAYLAAELILEI-GYLFQDGRVDPRKKCNAPLIAMKPNTNTFNIALAGCLLFETT 269
T E LE+ G + + G KPN T+ +AG E
Sbjct: 234 CRTGE-----LEKALEVFGSMLEAG--------------CKPNKYTYTTLIAGLCRAEKV 274
Query: 270 RKAEQLLDIMPRIGVKADSNLLIIMAHIYERNGRREELRKLQRHIDEAVNLSDIQFRQFY 329
+A +L + M + + D+ + Y + G +E KL R + L +
Sbjct: 275 IQARELFEKMTQACIPPDAVAYNSLIAGYCKRGSMDEAEKLYREMSGGAGLQPTIVT--F 332
Query: 330 NCLLSCHLKFGDLNSASKMVLEM 352
N L+ K G L A+++V EM
Sbjct: 333 NTLIDGFCKLGKLGRANELVAEM 355
>gi|413915966|gb|AFW55898.1| hypothetical protein ZEAMMB73_909442, partial [Zea mays]
Length = 694
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/232 (22%), Positives = 96/232 (41%), Gaps = 38/232 (16%)
Query: 504 LDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEA 563
LD+A LL +M G+R ++ +Y +++ A+ +A + E ALL +G+Q + Y A
Sbjct: 460 LDEAKSLLHKMDDCGLRPNTVIYTTIMDAFFKAGKESEAVALLHKIPDSGLQPNVVTYCA 519
Query: 564 LLQSKIVQKDTPGALHLFKEMKE--------------------SKIPRSGHQEFEMLVKG 603
L+ A+ F +M+E + ++ H EM+ KG
Sbjct: 520 LIDGLCKAGSIYEAISHFDKMRELGLDPNVQVYTTLIDGFCKIGSLSKAVHLMNEMVDKG 579
Query: 604 CA---------------QNHEAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQD 648
+ Q G A + ++ G ++D ++ + I FC +MQ+
Sbjct: 580 MSLDKVVYTSLIDGHMKQGDLQGAFALKAKMIETGLQLD--LYCYTCFISGFCNMNMMQE 637
Query: 649 AEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEMKSFASSTS 700
A L M G P+ ++ ++ Y + G E + L EM+S SS +
Sbjct: 638 ARGVLSEMIGTGITPDKTAYNCLIRKYQKL-GNMEEASSLQNEMESVLSSCT 688
Score = 59.7 bits (143), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 67/308 (21%), Positives = 128/308 (41%), Gaps = 22/308 (7%)
Query: 447 LQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISL----- 501
+ P E Y LV +AG+ + L + + L + +V+T + +
Sbjct: 335 MMPNEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQGL--------VPNVVTYTVMVDGLCK 386
Query: 502 -GWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASC 560
G + A D+L M AGV+A+ +Y +L+ + LL + ++ G++LD S
Sbjct: 387 EGKVAVADDVLSLMERAGVKANELLYTTLIHGHFMNKNSERALDLLNEMKNKGMELDVSL 446
Query: 561 YEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEV 620
Y L+ + A L +M + + R + ++ + + LL ++
Sbjct: 447 YGTLIWGLCKVQKLDEAKSLLHKMDDCGL-RPNTVIYTTIMDAFFKAGKESEAVALLHKI 505
Query: 621 KEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGG 680
+ + V + +I CK + +A +MR LG PN Q + +++ G+ I G
Sbjct: 506 PDSG-LQPNVVTYCALIDGLCKAGSIYEAISHFDKMRELGLDPNVQVYTTLIDGFCKI-G 563
Query: 681 KYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFIDK 740
++ L EM M+ D+ + S++ ++ G A + A M E + +D
Sbjct: 564 SLSKAVHLMNEM----VDKGMSLDKVVYTSLIDGHMKQGDLQGAFALKAKMIETGLQLDL 619
Query: 741 YKYRTLFL 748
Y Y T F+
Sbjct: 620 YCY-TCFI 626
Score = 48.1 bits (113), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 60/117 (51%), Gaps = 7/117 (5%)
Query: 577 ALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRIDCGVHDWNNV 636
A+ +++ ++P + +L++ A+N + GL+ +L + + V +N V
Sbjct: 152 AVRALARVRQLRVPPNTRTCNHILLR-LARNRQGGLVRRLFEHLPAPN-----VFTFNIV 205
Query: 637 IHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEMK 693
I F CK+ + +A RM+++G P+ T++S++ GY G+ EV L EM+
Sbjct: 206 IDFLCKQGELVEARALFVRMKAMGCSPDVVTYNSLIDGYGKC-GELEEVELLVSEMR 261
>gi|225454948|ref|XP_002277434.1| PREDICTED: pentatricopeptide repeat-containing protein At5g14770,
mitochondrial-like [Vitis vinifera]
Length = 835
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 65/279 (23%), Positives = 124/279 (44%), Gaps = 19/279 (6%)
Query: 497 LCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQL 556
LC + G +++ DLL++M + G + + + ++L A ++ R + + G++L
Sbjct: 481 LCAA-GEIEKTMDLLNDMLVMGFHPTPTTHKAVLDASSKSRRADVILHMHDQLVGMGVKL 539
Query: 557 DASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKG-CAQNHEAGLMAK 615
D S Y L+ + A +FK+M I + + L+ G C +H A
Sbjct: 540 DLSTYNTLISTFCRLGMIRRATLVFKDMMGKGI-LADIITYNALIHGYCISSHLKKAFAV 598
Query: 616 LLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGY 675
Q + EG + V +N ++ RL+++A + +M+ G +PNA T+ +V+G+
Sbjct: 599 HSQMLTEG--VSPNVETYNILLGGLSAARLIKEAAGLVNQMKERGLVPNATTYDILVSGH 656
Query: 676 AAIGGKYTEVTELWGEM--KSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEE 733
I G E +L+ EM K F T + ++ F +G ++A E++ M+
Sbjct: 657 GKI-GNMKECVKLYCEMITKGFVPKT------RTYNVLISCFAKGKKMSQAKELMQEMQV 709
Query: 734 GKMFIDKYKYRTLFLKYHK-----TLYKGKTPKFQTEAQ 767
+ + Y L ++K L K +Q EA+
Sbjct: 710 RGIPPNSSTYDILICGWYKLSKQPELNKSLKRSYQAEAK 748
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 61/257 (23%), Positives = 113/257 (43%), Gaps = 10/257 (3%)
Query: 497 LCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQL 556
LC S G +++A + EM GV + YA+L+ + + E L GI
Sbjct: 132 LCKS-GKVEEAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGF 190
Query: 557 DASCYEALLQSKIVQKDTPGALHLFKEM-KESKIPRSGHQEFEMLVKGCAQNHEAGLMAK 615
D Y AL+ A +F+ + +ES +P + L+ G + +
Sbjct: 191 DVVVYTALMDGLFKAGMANNAEDMFQVLLEESLVPNC--VTYSALIDGHCKLGDVNKGEL 248
Query: 616 LLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGY 675
LLQE++E + I V +++++ + KK L+ +A +++M LPN + +++ GY
Sbjct: 249 LLQEMEE-KHIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGY 307
Query: 676 AAIGGKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGK 735
+ + +L+ EMKS + NF ++DS + R G A+E+ M
Sbjct: 308 FKADQRGIAL-DLFKEMKSRGLEEN-NF---VIDSFVNNLKRSGRMEEADELFKDMMSRG 362
Query: 736 MFIDKYKYRTLFLKYHK 752
+ D+ Y ++ + K
Sbjct: 363 LLPDRVNYTSMMDGFFK 379
>gi|10177016|dbj|BAB10204.1| maize crp1 protein-like [Arabidopsis thaliana]
Length = 680
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 64/302 (21%), Positives = 128/302 (42%), Gaps = 29/302 (9%)
Query: 406 YEDFTKDRKFVALEAEVKRVLQTLLGMLQ-----KQVELITTEHGI-LQPTEKIYIKLVK 459
Y++ +D+ LE +V+ V ++G + K ++L+ L + ++
Sbjct: 228 YKEIERDK----LELDVQLVNDIIMGFAKSGDPSKALQLLGMAQATGLSAKTATLVSIIS 283
Query: 460 AFLEAGKTKELTHFLIKAEKENLQV---SHDDAALGHVITLCISLGWLDQAHDLLDEMHL 516
A ++G+T E + + ++ +++ G+V T G L A ++ EM
Sbjct: 284 ALADSGRTLEAEALFEELRQSGIKPRTRAYNALLKGYVKT-----GPLKDAESMVSEMEK 338
Query: 517 AGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQKDTPG 576
GV Y+ L+ AY+ A R +L++ + +Q ++ + LL + +
Sbjct: 339 RGVSPDEHTYSLLIDAYVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQK 398
Query: 577 ALHLFKEMKESKIPRSGHQEFEMLVKGCAQ----NHEAGLMAKLLQEVKEGQRIDCGVHD 632
+ KEMK + + Q + +++ + +H ++L E E R+
Sbjct: 399 TFQVLKEMKSIGV-KPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVT----- 452
Query: 633 WNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEM 692
WN +I CK AE+ + M G LP A T++ M+ Y ++ ++ L G+M
Sbjct: 453 WNTLIDCHCKHGRHIVAEEMFEAMERRGCLPCATTYNIMINSYGD-QERWDDMKRLLGKM 511
Query: 693 KS 694
KS
Sbjct: 512 KS 513
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 66/336 (19%), Positives = 131/336 (38%), Gaps = 46/336 (13%)
Query: 447 LQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQ 506
++P + Y L+K +++ G K+ + + EK VS D+ +I ++ G +
Sbjct: 306 IKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRG--VSPDEHTYSLLIDAYVNAGRWES 363
Query: 507 AHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQ 566
A +L EM V+ +S V++ LL + + ++ +L++ +S G++ D Y ++
Sbjct: 364 ARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVID 423
Query: 567 S------------------------------KIVQKDTPGALHLFKEMKESKIPRSG--- 593
+ ++ H+ E + R G
Sbjct: 424 TFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCLP 483
Query: 594 -HQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKA 652
+ +++ M +LL ++K Q I V ++ + K DA +
Sbjct: 484 CATTYNIMINSYGDQERWDDMKRLLGKMK-SQGILPNVVTHTTLVDVYGKSGRFNDAIEC 542
Query: 653 LKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEMKSFASSTSMNFDEEL--LDS 710
L+ M+S+G P++ +++++ YA G V +F TS L L+S
Sbjct: 543 LEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVN-------AFRVMTSDGLKPSLLALNS 595
Query: 711 VLYTFVRGGFFARANEVVAMMEEGKMFIDKYKYRTL 746
++ F A A V+ M+E + D Y TL
Sbjct: 596 LINAFGEDRRDAEAFAVLQYMKENGVKPDVVTYTTL 631
Score = 43.5 bits (101), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 42/223 (18%), Positives = 92/223 (41%), Gaps = 2/223 (0%)
Query: 454 YIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQAHDLLDE 513
Y ++++ + K + + E E ++ D + +I G +A LL
Sbjct: 206 YSLVIQSLTRSNKIDSVMLLRLYKEIERDKLELDVQLVNDIIMGFAKSGDPSKALQLLGM 265
Query: 514 MHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQKD 573
G+ A ++ S++ A ++ R E AL + R +GI+ Y ALL+ +
Sbjct: 266 AQATGLSAKTATLVSIISALADSGRTLEAEALFEELRQSGIKPRTRAYNALLKGYVKTGP 325
Query: 574 TPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRIDCGVHDW 633
A + EM++ + H + +L+ +L+E++ G + +
Sbjct: 326 LKDAESMVSEMEKRGVSPDEHT-YSLLIDAYVNAGRWESARIVLKEMEAGD-VQPNSFVF 383
Query: 634 NNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYA 676
+ ++ F + Q + LK M+S+G P+ Q ++ ++ +
Sbjct: 384 SRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTFG 426
>gi|356529465|ref|XP_003533312.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Glycine max]
Length = 546
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 83/171 (48%), Gaps = 4/171 (2%)
Query: 503 WLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYE 562
+D+A +L EMH + Y+SL+ ++ R V L+ + R G D Y
Sbjct: 354 MVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRISYVWDLIDEMRDRGQPADVITYS 413
Query: 563 ALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQE-VK 621
+L+ A+ LF +MK+ +I R F +L+ G + ++ Q+ +
Sbjct: 414 SLIDGLCKNGHLDRAIALFNKMKDQEI-RPNIFTFTILLDGLCKGGRLKDAQEVFQDLLT 472
Query: 622 EGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMV 672
+G ++ V+ +N +I+ CK+ L+++A L +M G +PNA TF +++
Sbjct: 473 KGYHLN--VYTYNVMINGHCKQGLLEEALTMLSKMEDNGCIPNAFTFETII 521
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 61/310 (19%), Positives = 122/310 (39%), Gaps = 41/310 (13%)
Query: 454 YIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVI--TLCISLGWLDQAHDLL 511
Y L+ + G T+ FL K + +++ D + + I +C + +A+ L
Sbjct: 167 YATLINGVCKIGDTRAAIKFLRKIDG---RLTKPDVVMYNTIIDAMC-KYQLVSEAYGLF 222
Query: 512 DEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQ 571
EM + G+ A Y +L+ + + +E LL + I + Y L+ +
Sbjct: 223 SEMAVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNEMVLKTINPNVYTYNILVDALC-- 280
Query: 572 KDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNH---EAGLMAK--LLQEVKEGQRI 626
KE K+ + +++K C + + LM L+ EVK+ Q +
Sbjct: 281 -------------KEGKV-KEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHV 326
Query: 627 ---------DCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAA 677
VH + +I+ FCK +++ +A K M +P T+ S++ G
Sbjct: 327 FNAMSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCK 386
Query: 678 IGGKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMF 737
G+ + V +L EM+ + L+D + + G RA + M++ ++
Sbjct: 387 -SGRISYVWDLIDEMRDRGQPADVITYSSLIDGL----CKNGHLDRAIALFNKMKDQEIR 441
Query: 738 IDKYKYRTLF 747
+ + + L
Sbjct: 442 PNIFTFTILL 451
Score = 42.0 bits (97), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 45/236 (19%), Positives = 91/236 (38%), Gaps = 10/236 (4%)
Query: 447 LQPTEKIYIKLVKAFLEAGKTKELTHFL---IKAEKENLQVSHDDAALGHVITLCISLGW 503
+ P Y LV A + GK KE L +KA + +++ G+ +
Sbjct: 265 INPNVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVY-----E 319
Query: 504 LDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEA 563
+ +A + + M L GV Y L+ + + E L ++ + Y +
Sbjct: 320 VKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSS 379
Query: 564 LLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEG 623
L+ L EM++ P + + L+ G +N L ++K+
Sbjct: 380 LIDGLCKSGRISYVWDLIDEMRDRGQP-ADVITYSSLIDGLCKNGHLDRAIALFNKMKD- 437
Query: 624 QRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIG 679
Q I + + ++ CK ++DA++ + + + G+ N T++ M+ G+ G
Sbjct: 438 QEIRPNIFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMINGHCKQG 493
>gi|356548144|ref|XP_003542463.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic-like [Glycine max]
Length = 756
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 74/323 (22%), Positives = 135/323 (41%), Gaps = 22/323 (6%)
Query: 431 GMLQKQVELITTEHGILQPTEKIYIKLVKAFLEAGKTK---ELTHFLIKAEKENLQVSHD 487
G +++ + I E G P + + LV G K E+ F+++ E +++
Sbjct: 283 GRIEEALRFIYEEEGFC-PDQVTFNALVNGLCRTGHIKQGLEMMDFMLEKGFELDVYTYN 341
Query: 488 DAALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLR 547
G LC LG +D+A ++L M ++ Y +L+ + N T L R
Sbjct: 342 SLISG----LC-KLGEIDEAVEILHHMVSRDCEPNTVTYNTLIGTLCKENHVEAATELAR 396
Query: 548 DARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKG-CAQ 606
S G+ D + +L+Q + + A+ LF+EMKE K + +L++ C++
Sbjct: 397 VLTSKGVLPDVCTFNSLIQGLCLTSNREIAMELFEEMKE-KGCDPDEFTYSILIESLCSE 455
Query: 607 NHEAGLMAKLLQEVKEGQRIDCG--VHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPN 664
+ + L +KE + C V +N +I CK + DAE +M LG +
Sbjct: 456 RR----LKEALMLLKEMELSGCARNVVVYNTLIDGLCKNNRVGDAEDIFDQMEMLGVSRS 511
Query: 665 AQTFHSMVTGYAAIGGKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARA 724
+ T+++++ G + E +L +M + D+ ++L F + G RA
Sbjct: 512 SVTYNTLINGLCK-SKRVEEAAQLMDQM----IMEGLKPDKFTYTTMLKYFCQQGDIKRA 566
Query: 725 NEVVAMMEEGKMFIDKYKYRTLF 747
++V M D Y TL
Sbjct: 567 ADIVQNMTLNGCEPDIVTYGTLI 589
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/190 (24%), Positives = 78/190 (41%), Gaps = 10/190 (5%)
Query: 507 AHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQ 566
A D+ D+M + GV SS Y +L+ ++ R E L+ G++ D Y +L+
Sbjct: 496 AEDIFDQMEMLGVSRSSVTYNTLINGLCKSKRVEEAAQLMDQMIMEGLKPDKFTYTTMLK 555
Query: 567 SKIVQKDTPGALHLFKEMK----ESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKE 622
Q D A + + M E I G L+ G + + +KLL+ V+
Sbjct: 556 YFCQQGDIKRAADIVQNMTLNGCEPDIVTYG-----TLIGGLCKAGRVDVASKLLRSVQM 610
Query: 623 GQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKY 682
+ +N VI CK++ ++A + + M G P+ T+ + G GG
Sbjct: 611 KGMV-LTPQAYNPVIQALCKRKRTKEAMRLFREMMEKGDPPDVITYKIVFRGLCNGGGPI 669
Query: 683 TEVTELWGEM 692
E + EM
Sbjct: 670 QEAVDFTVEM 679
Score = 45.8 bits (107), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 42/89 (47%)
Query: 502 GWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCY 561
G + +A D++ M L G Y +L+ +A R + LLR + G+ L Y
Sbjct: 561 GDIKRAADIVQNMTLNGCEPDIVTYGTLIGGLCKAGRVDVASKLLRSVQMKGMVLTPQAY 620
Query: 562 EALLQSKIVQKDTPGALHLFKEMKESKIP 590
++Q+ +K T A+ LF+EM E P
Sbjct: 621 NPVIQALCKRKRTKEAMRLFREMMEKGDP 649
Score = 41.2 bits (95), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 44/216 (20%), Positives = 91/216 (42%), Gaps = 5/216 (2%)
Query: 479 KENLQVSHDDAALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANR 538
+ + V D ++L + L L +M V S + L++A +A++
Sbjct: 155 ERDFAVKPDTRFYNVALSLLVKANKLKLVETLHSKMVADAVPPDVSTFNILIRALCKAHQ 214
Query: 539 PREVTALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFE 598
R +L D + G++ D + L+Q I + D GAL + + M ES +
Sbjct: 215 LRPAILMLEDMPNYGLRPDEKTFTTLMQGFIEEADVEGALRIKELMVESGCELTS-VSVN 273
Query: 599 MLVKGCAQNHEAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRS 658
+LV G + G + + L+ + E + +N +++ C+ ++ + + M
Sbjct: 274 VLVNGLCKE---GRIEEALRFIYEEEGFCPDQVTFNALVNGLCRTGHIKQGLEMMDFMLE 330
Query: 659 LGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEMKS 694
G + T++S+++G + G+ E E+ M S
Sbjct: 331 KGFELDVYTYNSLISGLCKL-GEIDEAVEILHHMVS 365
>gi|125569067|gb|EAZ10582.1| hypothetical protein OsJ_00414 [Oryza sativa Japonica Group]
Length = 1003
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/255 (23%), Positives = 102/255 (40%), Gaps = 19/255 (7%)
Query: 504 LDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEA 563
D A L EM G+ + YA L+ A + + L R GI++ Y +
Sbjct: 354 FDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRDKGIKVTVYPYNS 413
Query: 564 LLQSKIVQKDTPGALHLFKEM-KESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKE 622
L+ Q A L M KE P + + L+ G +N + +L +E+ E
Sbjct: 414 LINGYCKQGSLDRARGLLSGMVKEGLTPTAA--SYSPLIAGLCRNGDLSSCMELHREMAE 471
Query: 623 GQRIDCGVHDWNN-----VIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAA 677
G+ WNN +I+ FCK + M +A + +M +PN TF+ M+ GY
Sbjct: 472 R-----GIA-WNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGYCL 525
Query: 678 IGGKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMF 737
+ G + +L+ +M + D S++ ++ANE VA +E
Sbjct: 526 V-GNIRKAFQLYDQMVEMG----LKPDNYTYRSLISGLCLTSGVSKANEFVADLENSYAV 580
Query: 738 IDKYKYRTLFLKYHK 752
++ + L + +
Sbjct: 581 LNNFSLTALLYGFFR 595
Score = 56.2 bits (134), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 50/221 (22%), Positives = 96/221 (43%), Gaps = 7/221 (3%)
Query: 502 GWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCY 561
G ++ A L D+M G++ + Y SL+ Y + LL G+ A+ Y
Sbjct: 387 GMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASY 446
Query: 562 EALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVK 621
L+ D + L +EM E I + + F L+ G ++ + A+L ++
Sbjct: 447 SPLIAGLCRNGDLSSCMELHREMAERGIAWNNYT-FTALINGFCKDKKMDEAARLFDKMI 505
Query: 622 EGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGK 681
+ I V +N +I +C ++ A + +M +G P+ T+ S+++G G
Sbjct: 506 DSNVIPNEV-TFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSG- 563
Query: 682 YTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFA 722
++ E ++++ + + NF L ++LY F R G F
Sbjct: 564 VSKANEFVADLEN-SYAVLNNFS---LTALLYGFFREGRFT 600
Score = 43.9 bits (102), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 109/543 (20%), Positives = 209/543 (38%), Gaps = 68/543 (12%)
Query: 242 CNAPLIAMKPNTNTFNIALAGCLLFETTRKAEQLLDIMPRIGVKADSNLLIIMAHIYERN 301
C + M PN +N + E A++L M G++ + I+ H +
Sbjct: 327 CKLGDLGMVPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKR 386
Query: 302 GRREE-LRKLQRHIDEAVNLSDIQFRQFYNCLLSCHLKFGDLNSASKMVLEMLQRAKEAR 360
G E+ L + D+ + ++ YN L++ + K G L+ A ++ M+ KE
Sbjct: 387 GMIEDALCLFDKMRDKGIKVTVYP----YNSLINGYCKQGSLDRARGLLSGMV---KEGL 439
Query: 361 NSLAAAMLPFNAVGVNNRTPSEQNVNCTN-SVDLENSGIIENHILS---YEDFTKDRKFV 416
AA+ P A N S +C ++ GI N+ F KD+K
Sbjct: 440 TPTAASYSPLIAGLCRNGDLS----SCMELHREMAERGIAWNNYTFTALINGFCKDKKM- 494
Query: 417 ALEAEVKRVLQTLLGMLQKQVELITTEHGILQPTEKIYIKLVKAFLEAGKTKELTHFLIK 476
E R+ M+ V P E + +++ + G ++ F +
Sbjct: 495 ---DEAARLFDK---MIDSNV----------IPNEVTFNVMIEGYCLVGNIRK--AFQLY 536
Query: 477 AEKENLQVSHDDAALGHVIT-LCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIE 535
+ + + D+ +I+ LC++ G + +A++ + ++ + ++ +LL +
Sbjct: 537 DQMVEMGLKPDNYTYRSLISGLCLTSG-VSKANEFVADLENSYAVLNNFSLTALLYGFFR 595
Query: 536 ANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQ 595
R E L + G++LD + ++ + + Q D + LF+EMKE + +
Sbjct: 596 EGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQGV-KPDDI 654
Query: 596 EFEMLVKGCAQNHEAGLMAKL---LQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKA 652
+ ++ A + E ++ L Q V +G + H +I+ CK + AE
Sbjct: 655 FYTCMID--ALSKEENMIQALNCWDQMVVDGYSPNTVTH--TVLINNLCKSGYLGSAELL 710
Query: 653 LKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEM--KSFASSTSMNFDEELLDS 710
K M + LPN T++ + Y A G + +L M AS S N
Sbjct: 711 CKEMLAGNVLPNKFTYNCFLD-YFATEGDMEKAKDLHSAMLQGHLASIVSFNI------- 762
Query: 711 VLYTFVRGGFFARANEVVAMMEEGKMFIDKYKYRTL-------------FLKYHKTLYKG 757
++ + G A ++++ + E D Y T+ F +++ LYKG
Sbjct: 763 LIKGLCKAGKIQEAIDLMSKITESGFSPDCISYSTIIHELCKMGDINKAFELWNEMLYKG 822
Query: 758 KTP 760
P
Sbjct: 823 LKP 825
>gi|359486048|ref|XP_002270184.2| PREDICTED: pentatricopeptide repeat-containing protein At1g10910,
chloroplastic [Vitis vinifera]
gi|298204537|emb|CBI23812.3| unnamed protein product [Vitis vinifera]
Length = 659
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 65/275 (23%), Positives = 125/275 (45%), Gaps = 14/275 (5%)
Query: 460 AFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQAHDLLDEMHLAGV 519
A LE ++ +L L + + L+V + L H LC W D + L D M
Sbjct: 78 AILEVQQSSDLGSALARL-GDMLKVQDLNVILRHFGKLC---RWQDLSQ-LFDWMQ-KHE 131
Query: 520 RASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALH 579
+ + S Y++ +K ++ P + + + ++ + S ++L I +L
Sbjct: 132 KITFSSYSTYIKFMGKSLNPIKALEIYNSIQDESVRNNVSVCNSVLSCLIRNGKFENSLK 191
Query: 580 LFKEMKESKIPRSGHQEFEMLVKGCAQ-NHEAGLMAKLLQEVKEGQRIDCGVHDWNNVIH 638
LF +MK+ + R + L+ GC + H +L+QE+ E R+ + ++
Sbjct: 192 LFHQMKQDGL-RPDAVTYSTLLAGCMKVKHGYSKALELVQEM-ERSRLPMDSVIYGTLLA 249
Query: 639 FFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEMKSFASS 698
++AE +M+ GHLPN + S++ Y+A G Y + L +MK S
Sbjct: 250 VCASNNRCKEAENYFNQMKDEGHLPNVFHYSSLLNAYSA-DGDYKKADMLVQDMK----S 304
Query: 699 TSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEE 733
+ ++ +L ++L +VRGG F ++ E++A +E+
Sbjct: 305 AGLVPNKVILTTLLKVYVRGGLFEKSRELLAELED 339
Score = 41.6 bits (96), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 51/255 (20%), Positives = 106/255 (41%), Gaps = 19/255 (7%)
Query: 502 GWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCY 561
G +++ +LL E+ G Y L+ ++ R E ++ + + ++ D CY
Sbjct: 325 GLFEKSRELLAELEDLGYAEDEMPYCLLMDGLAKSRRILEAKSIFEEMKKKQVKSDGYCY 384
Query: 562 EALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVK 621
++ + G L K++ + ML AG M ++Q ++
Sbjct: 385 SIMISAFC----RSGLLKEAKQLARDFEATYDKYDLVMLNTMLCAYCRAGEMESVMQMMR 440
Query: 622 EGQRIDCGVHDWNN---VIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAI 678
+ + DWN +I +FCK++L A + ++ M + GH P + S+++ I
Sbjct: 441 KMDELAISP-DWNTFHILIKYFCKEKLYLLAYRTMEDMHNKGHQPEEELCSSLISHLGKI 499
Query: 679 GGKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFI 738
+++ ++ M ++ T + L + +L+ V G A VV ++ + I
Sbjct: 500 RA-HSQAFSVYN-MLRYSKRT---MCKALHEKILHILVAGRLLKDAYVVV---KDNEGLI 551
Query: 739 DK---YKYRTLFLKY 750
K K+ T F+K+
Sbjct: 552 SKPSIKKFATAFMKF 566
Score = 41.2 bits (95), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 49/231 (21%), Positives = 104/231 (45%), Gaps = 15/231 (6%)
Query: 478 EKENLQVSHDDAALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEAN 537
E E ++ D G ++ +C S +A + ++M G + Y+SLL AY
Sbjct: 231 EMERSRLPMDSVIYGTLLAVCASNNRCKEAENYFNQMKDEGHLPNVFHYSSLLNAYSADG 290
Query: 538 RPREVTALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKE--SKIPRSGHQ 595
++ L++D +SAG+ + LL+ + G LF++ +E +++ G+
Sbjct: 291 DYKKADMLVQDMKSAGLVPNKVILTTLLKVYV-----RGG--LFEKSRELLAELEDLGYA 343
Query: 596 EFEM----LVKGCAQNHEAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEK 651
E EM L+ G A++ + +E+K+ Q + + ++ +I FC+ L+++A++
Sbjct: 344 EDEMPYCLLMDGLAKSRRILEAKSIFEEMKKKQ-VKSDGYCYSIMISAFCRSGLLKEAKQ 402
Query: 652 ALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEMKSFASSTSMN 702
+ + + ++M+ Y G+ V ++ +M A S N
Sbjct: 403 LARDFEATYDKYDLVMLNTMLCAYCR-AGEMESVMQMMRKMDELAISPDWN 452
>gi|12324362|gb|AAG52154.1|AC022355_15 unknown protein; 19199-17308 [Arabidopsis thaliana]
Length = 558
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 102/489 (20%), Positives = 192/489 (39%), Gaps = 75/489 (15%)
Query: 247 IAMKPNTNTFNIALAGCLLFETTRKAEQLLDIMPRIGVKADSNLLIIMAH-IYERNGRRE 305
+ +P+ T + L G + A L+D M +G + D+ + H ++ N E
Sbjct: 73 LGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASE 132
Query: 306 ELRKLQRHIDEAVNLSDIQFRQFYNCLLSCHLKFGDLNSASKMVLEMLQRAKEARNSLAA 365
+ + R + + + + N L K GD++ A +L + + A+ + A
Sbjct: 133 AVALVDRMVQRGCQPNLVTYGVVVNGLC----KRGDIDLA----FNLLNKMEAAK--IEA 182
Query: 366 AMLPFNAVGVNNRTPSEQNVNCTNSV-DLENSGIIENHILSYEDFTKDRKFVALEAEVKR 424
++ FN + +++ + N ++E GI N +++Y +
Sbjct: 183 DVVIFNTI-IDSLCKYRHVDDALNLFKEMETKGIRPN-VVTYSSLIS---CLCSYGRWSD 237
Query: 425 VLQTLLGMLQKQVELITTEHGILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEK---EN 481
Q L M++K++ P + L+ AF++ GK ++AEK +
Sbjct: 238 ASQLLSDMIEKKI----------NPNLVTFNALIDAFVKEGK-------FVEAEKLHDDM 280
Query: 482 LQVSHDDAALGH---VITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANR 538
++ S D + + C+ LD+A + + M Y +L+K + ++ R
Sbjct: 281 IKRSIDPDIFTYNSLINGFCMH-DRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKR 339
Query: 539 PREVTALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIP-------- 590
+ T L R+ G+ D Y L+Q D A +FK+M +P
Sbjct: 340 VEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSI 399
Query: 591 ------RSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQ----RIDCG----------- 629
+G E + V Q E L + + EG ++D G
Sbjct: 400 LLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKG 459
Query: 630 ----VHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEV 685
V +N +I C KRL+Q+A LK+M+ G LP++ T+++++ + G K
Sbjct: 460 VKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAAS- 518
Query: 686 TELWGEMKS 694
EL EM+S
Sbjct: 519 AELIREMRS 527
Score = 59.7 bits (143), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 57/251 (22%), Positives = 107/251 (42%), Gaps = 9/251 (3%)
Query: 510 LLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKI 569
LL +M G S +SLL Y R + AL+ G + D + L+
Sbjct: 66 LLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLF 125
Query: 570 VQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRIDCG 629
+ A+ L M + + + ++V G + + L LL ++ E +I+
Sbjct: 126 LHNKASEAVALVDRMVQRGC-QPNLVTYGVVVNGLCKRGDIDLAFNLLNKM-EAAKIEAD 183
Query: 630 VHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELW 689
V +N +I CK R + DA K M + G PN T+ S+++ + G++++ ++L
Sbjct: 184 VVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSY-GRWSDASQLL 242
Query: 690 GEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFIDKYKYRTLFLK 749
+M +N + ++++ FV+ G F A ++ M + + D + Y +L
Sbjct: 243 SDM----IEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLING 298
Query: 750 Y--HKTLYKGK 758
+ H L K K
Sbjct: 299 FCMHDRLDKAK 309
>gi|357122161|ref|XP_003562784.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g02860-like [Brachypodium distachyon]
Length = 791
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 72/324 (22%), Positives = 124/324 (38%), Gaps = 40/324 (12%)
Query: 494 VITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAG 553
+I+ C +A + DEM AG SLL Y +A R E +L++ G
Sbjct: 253 LISCCRRRALYKEAAKVFDEMRAAGFEPDKVTLNSLLDVYGKARRYDEAIGVLKEMEQGG 312
Query: 554 IQLDASCYEALLQSKIVQKDTPGALHLFKEMK--------------ESKIPRSGHQEF-- 597
Y +L+ S + A L +EM+ S + R+G +
Sbjct: 313 CPPSVVTYNSLISSYVKDGLLEEATQLKEEMEVKGIEPDVITYTTLVSGLDRAGKIDAAI 372
Query: 598 ----EMLVKGCAQN---HEA-----GLMAK------LLQEVKEGQRIDCGVHDWNNVIHF 639
EML GC N + A G+ K + E++ + V WN ++
Sbjct: 373 GTYNEMLRNGCKPNLCTYNALIKLHGVRGKFPEMMIVFDEIRSAGFVP-DVVTWNTLLAV 431
Query: 640 FCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEMKSFASST 699
F + L + K M+ G++P T+ S+++ Y+ G + + E++ M
Sbjct: 432 FGQNGLDTEVSGVFKEMKKSGYVPERDTYVSLISSYSRC-GLFDQAMEIYKRM----IEA 486
Query: 700 SMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFIDKYKYRTLFLKYHKTLYKGKT 759
++ D ++VL RGG + +A ++ A ME D+ Y +L Y K
Sbjct: 487 GIHPDISTYNAVLSALARGGRWEQAEKLFAEMENLDSRPDELSYSSLLHAYANAKKLDKM 546
Query: 760 PKFQTEAQLKKREAALGFKKWLGL 783
+ ++ E+ G K L L
Sbjct: 547 KSLSEDIYAERIESHNGLVKTLVL 570
Score = 48.9 bits (115), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 73/348 (20%), Positives = 139/348 (39%), Gaps = 50/348 (14%)
Query: 443 EHGILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLG 502
E G P+ Y L+ ++++ G +E T +K E E + D +++ G
Sbjct: 309 EQGGCPPSVVTYNSLISSYVKDGLLEEATQ--LKEEMEVKGIEPDVITYTTLVSGLDRAG 366
Query: 503 WLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYE 562
+D A +EM G + + Y +L+K + + E+ + + RSAG D +
Sbjct: 367 KIDAAIGTYNEMLRNGCKPNLCTYNALIKLHGVRGKFPEMMIVFDEIRSAGFVPDVVTWN 426
Query: 563 ALLQ---SKIVQKDTPGALHLFKEMKESK-IPRSGHQEFEMLVKGCAQNHEAGLMAKLLQ 618
LL + + G +FKEMK+S +P E + V + GL + ++
Sbjct: 427 TLLAVFGQNGLDTEVSG---VFKEMKKSGYVP-----ERDTYVSLISSYSRCGLFDQAME 478
Query: 619 EVKEGQRIDCGVH----DWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTG 674
K + I+ G+H +N V+ + + AEK M +L P+ ++ S++
Sbjct: 479 IYK--RMIEAGIHPDISTYNAVLSALARGGRWEQAEKLFAEMENLDSRPDELSYSSLLHA 536
Query: 675 YAAIG----------GKYTEVTELW-GEMKSFA---------SSTSMNF----------D 704
YA Y E E G +K+ S T F D
Sbjct: 537 YANAKKLDKMKSLSEDIYAERIESHNGLVKTLVLVNSKVNNLSDTEKAFLELRRRRCSLD 596
Query: 705 EELLDSVLYTFVRGGFFARANEVVAMMEEGKMFIDKYKYRTLFLKYHK 752
+L++++ + + G + E++++M+E + + Y +L Y +
Sbjct: 597 INVLNAMISIYGKNGMVKKVEEILSLMKESSINLSTATYNSLMHMYSR 644
Score = 45.8 bits (107), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 52/251 (20%), Positives = 98/251 (39%), Gaps = 7/251 (2%)
Query: 502 GWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCY 561
G + + EM +G Y SL+ +Y + + + AGI D S Y
Sbjct: 436 GLDTEVSGVFKEMKKSGYVPERDTYVSLISSYSRCGLFDQAMEIYKRMIEAGIHPDISTY 495
Query: 562 EALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVK 621
A+L + A LF EM E+ R + L+ A + M L +++
Sbjct: 496 NAVLSALARGGRWEQAEKLFAEM-ENLDSRPDELSYSSLLHAYANAKKLDKMKSLSEDIY 554
Query: 622 EGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGK 681
+RI+ ++ K + D EKA +R + ++M++ Y G
Sbjct: 555 -AERIESHNGLVKTLVLVNSKVNNLSDTEKAFLELRRRRCSLDINVLNAMISIYGK-NGM 612
Query: 682 YTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFIDKY 741
+V E+ MK +S+N +S+++ + R G + ++ ++ + D+Y
Sbjct: 613 VKKVEEILSLMKE----SSINLSTATYNSLMHMYSRLGDCEKCENILTEIKSSRARPDRY 668
Query: 742 KYRTLFLKYHK 752
Y T+ Y +
Sbjct: 669 SYNTMIYAYGR 679
Score = 42.7 bits (99), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 113/612 (18%), Positives = 232/612 (37%), Gaps = 103/612 (16%)
Query: 184 ASTILRKLVATEQYPPVTAWSAILAHMSLTAPGAYLAAELILEIGYLFQDGRVDPRKKCN 243
A + R++VA P + ++ +L S A + + +L + VD +K
Sbjct: 195 AVAVFRRMVANGVCPALVTYNVVLHVYSKIA----VPWKEVLAL--------VDSMRKDG 242
Query: 244 APLIAMKPNTNTFNIALAGCLLFETTRKAEQLLDIMPRIGVKADSNLLIIMAHIYERNGR 303
PL + T+N ++ C ++A ++ D M G + D L + +Y + R
Sbjct: 243 IPL-----DRYTYNTLISCCRRRALYKEAAKVFDEMRAAGFEPDKVTLNSLLDVYGKARR 297
Query: 304 REELRKLQRHIDEAVNLSDIQFRQFYNCLLSCHLKFGDLNSASKMVLEM----------- 352
+E + + +++ + YN L+S ++K G L A+++ EM
Sbjct: 298 YDEAIGVLKEMEQGGCPPSVVT---YNSLISSYVKDGLLEEATQLKEEMEVKGIEPDVIT 354
Query: 353 -------LQRAKEA-----------RNSLAAAMLPFNAV----GVNNRTPSEQ------- 383
L RA + RN + +NA+ GV + P
Sbjct: 355 YTTLVSGLDRAGKIDAAIGTYNEMLRNGCKPNLCTYNALIKLHGVRGKFPEMMIVFDEIR 414
Query: 384 ---------------NVNCTNSVDLENSGIIENHILSYEDFTKDRK-FVALEAEVKRVLQ 427
V N +D E SG+ + + + +R +V+L + R
Sbjct: 415 SAGFVPDVVTWNTLLAVFGQNGLDTEVSGVFKE--MKKSGYVPERDTYVSLISSYSRC-- 470
Query: 428 TLLGMLQKQVELIT--TEHGILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVS 485
G+ + +E+ E GI P Y ++ A G+ ++ AE ENL
Sbjct: 471 ---GLFDQAMEIYKRMIEAGI-HPDISTYNAVLSALARGGRWEQAEKLF--AEMENLDSR 524
Query: 486 HDDAALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTAL 545
D+ + ++ + LD+ L ++++ + + + + +L+ + N +
Sbjct: 525 PDELSYSSLLHAYANAKKLDKMKSLSEDIYAERIESHNGLVKTLVLVNSKVNNLSDTEKA 584
Query: 546 LRDARSAGIQLDASCYEALL----QSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLV 601
+ R LD + A++ ++ +V+K + MKES I S + L+
Sbjct: 585 FLELRRRRCSLDINVLNAMISIYGKNGMVKK----VEEILSLMKESSINLST-ATYNSLM 639
Query: 602 KGCAQNHEAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGH 661
++ + +L E+K R + +N +I+ + +K M++A + M+ G
Sbjct: 640 HMYSRLGDCEKCENILTEIKS-SRARPDRYSYNTMIYAYGRKGQMKEASRLFSEMKCSGL 698
Query: 662 LPNAQTFHSMVTGYAAIGGKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFF 721
+P+ T++ V Y A + E +L M + +E +++L + G
Sbjct: 699 VPDIVTYNIFVKSYVA-NSMFEEAIDLVRYMVTHGCKP----NERTYNTILQEYCSHGRI 753
Query: 722 ARANEVVAMMEE 733
A ++ + E
Sbjct: 754 ADGKSFISNLPE 765
>gi|242069919|ref|XP_002450236.1| hypothetical protein SORBIDRAFT_05g002360 [Sorghum bicolor]
gi|241936079|gb|EES09224.1| hypothetical protein SORBIDRAFT_05g002360 [Sorghum bicolor]
Length = 833
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 100/537 (18%), Positives = 215/537 (40%), Gaps = 35/537 (6%)
Query: 227 IGYLFQDGRVDPRKKCNAPLI--AMKPNTNTFNIALAGCLLFETTRKAEQLLDIMPRIGV 284
I F++G+VD +I + P+ T+N + G + +A+ + M GV
Sbjct: 311 INGFFREGQVDKAYNLFLQMIDRGIPPDVVTYNTVIDGLCKAQVVDRAKAVFQQMLDKGV 370
Query: 285 KADSNLLIIMAHIYERNGRREELRKLQRHIDEAVNLSDIQFRQF-YNCLLSCHLKFGDLN 343
K + + H Y G+ +E+ +L E ++ D++ F Y LL K G
Sbjct: 371 KPSNGTYNCLIHGYLSTGKWKEVVRLL----EEMSTHDLEPDCFIYALLLDYLCKNGRCT 426
Query: 344 SASKMVLEMLQRAKEARNSLAAAMLPFNAVGVNNRTPSEQNVNCTNSVD-LENSGIIENH 402
A + ++++ + + A+ F+ + +P+ VN +D L G +++
Sbjct: 427 EARNIFDSVIRKGIKPDAMIDEAVCIFDKMRQQGLSPNV--VNYGALIDALCKLGRVDDA 484
Query: 403 ILSYEDFTKDRKFVALEAEVKRVLQTLLGMLQKQVELITTEHGILQPTEKIYIKLVKAFL 462
IL + + + + ++ + + ML + + L ++ L+
Sbjct: 485 ILKFNQMINEVYGLCTVEKWEKAEELVFEMLDQGIRLDVV----------VFNTLMCDLC 534
Query: 463 EAGKTKE---LTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQAHDLLDEMHLAGV 519
G+ E L +++ +S++ GH +T G D+A LLD M G+
Sbjct: 535 REGRVMEAQRLIELMLRVGVRPDVISYNTLVDGHCLT-----GRTDEAAKLLDVMVSIGL 589
Query: 520 RASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALH 579
+ + Y +LL Y +A R + +LLR+ G D Y +L A
Sbjct: 590 KPNEFTYNTLLHGYCKARRIDDAYSLLREMLMNGPTPDVVTYNTILHGLFQTGRFSEAKE 649
Query: 580 LFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRIDCGVHDWNNVIHF 639
L+ M S+ + + +++ G +N+ K+ Q + + + + +N +I
Sbjct: 650 LYLNMINSRTQWDMYT-YNIILNGLCKNNCVDEAFKMFQSLCS-KGLQLHIITFNIMIGA 707
Query: 640 FCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEMKSFASST 699
K +DA + + G +P+ +T+ ++ G E+ L+ M+ ++
Sbjct: 708 LLKGGKKEDAMDLFATISAYGLVPDVETY-CLIAENLIKEGSLEELGVLFSAMEENGTAP 766
Query: 700 SMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFIDKYKYRTLFLKYHKTLYK 756
+ +L++++ F+ G +RA ++ ++E ++ L Y + Y+
Sbjct: 767 ----NSRMLNALVRRFLHRGDISRAGAYLSKLDEKNFSLEASTASMLISLYSRGEYQ 819
>gi|15238925|ref|NP_199046.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75154282|sp|Q8L844.1|PP413_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g42310, mitochondrial; Flags: Precursor
gi|21539517|gb|AAM53311.1| maize crp1 protein-like [Arabidopsis thaliana]
gi|332007411|gb|AED94794.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 709
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 62/299 (20%), Positives = 125/299 (41%), Gaps = 23/299 (7%)
Query: 406 YEDFTKDRKFVALEAEVKRVLQTLLGMLQ-----KQVELITTEHGI-LQPTEKIYIKLVK 459
Y++ +D+ LE +V+ V ++G + K ++L+ L + ++
Sbjct: 257 YKEIERDK----LELDVQLVNDIIMGFAKSGDPSKALQLLGMAQATGLSAKTATLVSIIS 312
Query: 460 AFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQAHDLLDEMHLAGV 519
A ++G+T E + + ++ A ++ + G L A ++ EM GV
Sbjct: 313 ALADSGRTLEAEALFEELRQSGIKPR--TRAYNALLKGYVKTGPLKDAESMVSEMEKRGV 370
Query: 520 RASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALH 579
Y+ L+ AY+ A R +L++ + +Q ++ + LL + +
Sbjct: 371 SPDEHTYSLLIDAYVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQ 430
Query: 580 LFKEMKESKIPRSGHQEFEMLVKGCAQ----NHEAGLMAKLLQEVKEGQRIDCGVHDWNN 635
+ KEMK + + Q + +++ + +H ++L E E R+ WN
Sbjct: 431 VLKEMKSIGV-KPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVT-----WNT 484
Query: 636 VIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEMKS 694
+I CK AE+ + M G LP A T++ M+ Y ++ ++ L G+MKS
Sbjct: 485 LIDCHCKHGRHIVAEEMFEAMERRGCLPCATTYNIMINSYGD-QERWDDMKRLLGKMKS 542
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 66/336 (19%), Positives = 131/336 (38%), Gaps = 46/336 (13%)
Query: 447 LQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQ 506
++P + Y L+K +++ G K+ + + EK VS D+ +I ++ G +
Sbjct: 335 IKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRG--VSPDEHTYSLLIDAYVNAGRWES 392
Query: 507 AHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQ 566
A +L EM V+ +S V++ LL + + ++ +L++ +S G++ D Y ++
Sbjct: 393 ARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVID 452
Query: 567 S------------------------------KIVQKDTPGALHLFKEMKESKIPRSG--- 593
+ ++ H+ E + R G
Sbjct: 453 TFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCLP 512
Query: 594 -HQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKA 652
+ +++ M +LL ++K Q I V ++ + K DA +
Sbjct: 513 CATTYNIMINSYGDQERWDDMKRLLGKMK-SQGILPNVVTHTTLVDVYGKSGRFNDAIEC 571
Query: 653 LKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEMKSFASSTSMNFDEEL--LDS 710
L+ M+S+G P++ +++++ YA G V +F TS L L+S
Sbjct: 572 LEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVN-------AFRVMTSDGLKPSLLALNS 624
Query: 711 VLYTFVRGGFFARANEVVAMMEEGKMFIDKYKYRTL 746
++ F A A V+ M+E + D Y TL
Sbjct: 625 LINAFGEDRRDAEAFAVLQYMKENGVKPDVVTYTTL 660
Score = 43.5 bits (101), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 42/223 (18%), Positives = 92/223 (41%), Gaps = 2/223 (0%)
Query: 454 YIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQAHDLLDE 513
Y ++++ + K + + E E ++ D + +I G +A LL
Sbjct: 235 YSLVIQSLTRSNKIDSVMLLRLYKEIERDKLELDVQLVNDIIMGFAKSGDPSKALQLLGM 294
Query: 514 MHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQKD 573
G+ A ++ S++ A ++ R E AL + R +GI+ Y ALL+ +
Sbjct: 295 AQATGLSAKTATLVSIISALADSGRTLEAEALFEELRQSGIKPRTRAYNALLKGYVKTGP 354
Query: 574 TPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRIDCGVHDW 633
A + EM++ + H + +L+ +L+E++ G + +
Sbjct: 355 LKDAESMVSEMEKRGVSPDEHT-YSLLIDAYVNAGRWESARIVLKEMEAGD-VQPNSFVF 412
Query: 634 NNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYA 676
+ ++ F + Q + LK M+S+G P+ Q ++ ++ +
Sbjct: 413 SRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTFG 455
>gi|293334951|ref|NP_001170632.1| uncharacterized protein LOC100384682 [Zea mays]
gi|238006488|gb|ACR34279.1| unknown [Zea mays]
gi|413925463|gb|AFW65395.1| hypothetical protein ZEAMMB73_565010 [Zea mays]
Length = 462
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 73/308 (23%), Positives = 119/308 (38%), Gaps = 63/308 (20%)
Query: 502 GWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCY 561
GWLD+A +L + G+ Y +LL AY + A++ R AG++ DA Y
Sbjct: 26 GWLDRAESVLVDAIRLGLPPDVVTYNTLLAAYCRVDGLDAGLAVVHRMREAGVRPDAVTY 85
Query: 562 EALLQSKIVQKDTPGALHLFKEMKESKIP--------------RSGHQEF------EMLV 601
+L+ T AL LF EM S + RSGH E +M
Sbjct: 86 NSLITGADRSGLTVRALDLFDEMLRSGVAPDSWSYNALMHCLFRSGHPEHAYRVFADMAD 145
Query: 602 KG---CAQNH--------EAGLMAKLLQEVKEGQR--IDCGVHDWNNVIHFFCKKRLMQD 648
+G CA + +AG + + + QR + G+ +N +I+ CK +
Sbjct: 146 RGVAPCATTYNTLLDGLLKAGHVTNAFRMFRYLQRAGLPVGIVTYNTMINGLCKSGKVGY 205
Query: 649 AEKALKRMRSLGHLPNAQTFHSMVT---------------------GYAAIGGKYTEVTE 687
A LK + H PNA T+ +++ GY + YT V
Sbjct: 206 ARMVLKELGRTEHAPNAVTYTTVMKCCFRYGRFEQGLETFLSLLEGGYISDAFPYTTVIS 265
Query: 688 LW---GEMKSFASSTSM------NFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFI 738
G M+ + + D +++++ + G A E++ MMEEG +
Sbjct: 266 ALVKKGRMQEANTYCELMIQSGSTLDNACYNTLIHLRCQEGKINDAFELLNMMEEGGLES 325
Query: 739 DKYKYRTL 746
D+Y + L
Sbjct: 326 DEYTFSIL 333
>gi|144923530|gb|ABE80159.2| Tetratricopeptide-like helical [Medicago truncatula]
Length = 695
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/235 (25%), Positives = 95/235 (40%), Gaps = 7/235 (2%)
Query: 443 EHGILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLG 502
E GIL Y L+ G+ +E+T L K +EN V DD +I G
Sbjct: 223 ERGILLDAVT-YNSLIDGCCSVGRWQEVTQLLTKMVREN--VDPDDYTFNILIDALCKEG 279
Query: 503 WLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYE 562
+ +A +L M G + Y +L++ Y E L G++ D Y
Sbjct: 280 RILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRGLEPDVLNYN 339
Query: 563 ALLQSKIVQKDTPGALHLFKEM-KESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVK 621
L+ K A+ LFKE+ ++ +P + L+ G + + KLL E+
Sbjct: 340 VLIDGYCKTKMVDEAMVLFKELCNKNLVPTIA--SYNSLIDGLCNSGRISHVKKLLDEM- 396
Query: 622 EGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYA 676
G V +N +I CK+ + +A L M G PN T+++M+ GY
Sbjct: 397 HGSAQPPDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYC 451
Score = 49.7 bits (117), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 88/446 (19%), Positives = 165/446 (36%), Gaps = 41/446 (9%)
Query: 255 TFNIALAGCLLFETTRKAEQLLDIMPRIGVKADSNLLIIMAHIYERNGRREELRKLQRHI 314
T+N + GC ++ QLL M R V D I+ + GR E + + +
Sbjct: 232 TYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDALCKEGRILEAQGVLAMM 291
Query: 315 DEAVNLSDIQFRQFYNCLLSCHLKFGDLNSASKMVLEMLQRAKEARNSLAAAMLPFNAVG 374
+ DI YN L+ + +++ A ++ M++R E
Sbjct: 292 SKRGEKPDIVT---YNALMEGYCSRENVHEARELFNRMVKRGLE---------------- 332
Query: 375 VNNRTPSEQNVNCTNSVDLENSGIIENHILSYEDFTKDRKFVALEAEVKRVLQTLL--GM 432
P N N + + E +L E K+ V A ++ L G
Sbjct: 333 -----PDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKN--LVPTIASYNSLIDGLCNSGR 385
Query: 433 LQKQVELITTEHGILQPTEKI-YIKLVKAFLEAGKTKELTHFLIKAEKENLQ---VSHDD 488
+ +L+ HG QP + + Y L+ A + G+ E L+ K+ ++ V+++
Sbjct: 386 ISHVKKLLDEMHGSAQPPDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNA 445
Query: 489 AALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRD 548
G+ + ++ A D+ + M +G+ Y L+ Y + E L ++
Sbjct: 446 MMDGYCLR-----NNVNVAKDIFNRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKE 500
Query: 549 ARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNH 608
R + D + Y +L+ P L EM +S + +L+ +
Sbjct: 501 MRHKNLIPDIASYNSLIDGLCNLGRIPHVQELLDEMCDSG-QSPDVITYNILLDAFCKTQ 559
Query: 609 EAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTF 668
L +++ EG D + + ++ CK ++ AE ALK + G PN QT+
Sbjct: 560 PFDKAISLFRQIVEGIWPD--FYTNHAIVDNLCKGEKLKMAEDALKHLLMHGCSPNVQTY 617
Query: 669 HSMVTGYAAIGGKYTEVTELWGEMKS 694
++ G + E L +M+
Sbjct: 618 TILINALCK-DGSFGEAMLLLSKMED 642
Score = 42.4 bits (98), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 41/196 (20%), Positives = 82/196 (41%), Gaps = 4/196 (2%)
Query: 497 LCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQL 556
CI+ G + +A D + G Y +L+ + + + LL++ + +Q
Sbjct: 135 FCIN-GMIFKALDFCQNLLAQGYLFDQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQP 193
Query: 557 DASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKL 616
+ Y AL+ AL L ++ E I + L+ GC + +L
Sbjct: 194 NLVMYSALIDGLCKDGFVSDALGLCSQIGERGILLDA-VTYNSLIDGCCSVGRWQEVTQL 252
Query: 617 LQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYA 676
L ++ + +D + +N +I CK+ + +A+ L M G P+ T+++++ GY
Sbjct: 253 LTKMVR-ENVDPDDYTFNILIDALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYC 311
Query: 677 AIGGKYTEVTELWGEM 692
+ + E EL+ M
Sbjct: 312 SRENVH-EARELFNRM 326
>gi|168056841|ref|XP_001780426.1| predicted protein [Physcomitrella patens subsp. patens]
gi|54695174|dbj|BAD67152.1| PpPPR_38 [Physcomitrella patens]
gi|162668102|gb|EDQ54716.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 513
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/247 (23%), Positives = 108/247 (43%), Gaps = 24/247 (9%)
Query: 447 LQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVS-HDDAALGHVITLCISLGWLD 505
LQP Y LV A+ + G +E L + L V DD ++ G D
Sbjct: 246 LQPDAIAYTALVHAYAQEGLWEEAEKTL----SDMLDVGIVDDRPYAALVAAYGKAGLTD 301
Query: 506 QAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALL 565
+ +L+ M +GV AS+++Y +L+ + +A P + A+L+ ++ G Q D Y +++
Sbjct: 302 NVNKILETMKASGVEASTTLYNTLINIHSKAEAPEKARAVLQLMQADGCQCDEITYTSVM 361
Query: 566 QSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQR 625
++ K A + EMK + I + G + +L+ + G ++L+ ++ +
Sbjct: 362 EAYSRNKQPLMAESMMGEMKRAGI-QPGPVSYGVLISAYCRAGRLGDAERILRAMQNA-K 419
Query: 626 IDCGVHDWNNVIHFFCKKRL----------MQD-------AEKALKRMRSLGHLPNAQTF 668
V +N +I + ++ MQD AE RM+ LG PNA T+
Sbjct: 420 CKPTVEIYNMMISGYASAKMRSQAERMFQTMQDCGLRPDAAEDCYIRMQQLGCKPNAVTY 479
Query: 669 HSMVTGY 675
++ Y
Sbjct: 480 KILLKAY 486
>gi|414591646|tpg|DAA42217.1| TPA: hypothetical protein ZEAMMB73_097907 [Zea mays]
Length = 476
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 104/236 (44%), Gaps = 10/236 (4%)
Query: 518 GVRASSSVYASLLKAYIEANRPRE-VTALLRDARSAGIQLDASCYEALLQSKIVQKDTPG 576
G+R + LLK + EA R E + LL G D S Y LL+S Q +
Sbjct: 141 GLRVDIIIANHLLKGFCEAKRTDEALDILLHRTPELGCVPDVSSYNILLKSLCNQGKSGQ 200
Query: 577 ALHLFKEMKES-KIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQE-VKEGQRIDCGVHDWN 634
A L + M E + + ++ G + + L +E V+ G D ++
Sbjct: 201 ADDLLRMMAEGGAVCSPDVVAYTTVIDGFFKEGDVNKACDLFKEMVQRGIPPD--FVTYS 258
Query: 635 NVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEMKS 694
+V+H CK R M AE L++M + G LPN T+++++ GY++ G++ E ++ EM+
Sbjct: 259 SVVHALCKARAMDKAEAFLRQMVNKGVLPNNWTYNNLIYGYSST-GQWKEAVRVFKEMRR 317
Query: 695 FASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFIDKYKYRTLFLKY 750
++ D L++++ + + G A +V M + + Y + Y
Sbjct: 318 H----NILLDVVNLNTLMGSLCKYGKIKEARDVFDTMAMKGQNPNVFSYTIMLNGY 369
Score = 46.2 bits (108), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 67/295 (22%), Positives = 106/295 (35%), Gaps = 56/295 (18%)
Query: 398 IIENHILSYEDFTKDRKFVALEAEVKRVLQTLLGMLQKQVELITTEHGILQPTEKIYIKL 457
II NH+L + F E KR + L +L + EL P Y L
Sbjct: 147 IIANHLL--------KGFC----EAKRTDEALDILLHRTPELGCV------PDVSSYNIL 188
Query: 458 VKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQAHDLLDEMHLA 517
+K+ GK+ + L + S D A VI G +++A DL EM
Sbjct: 189 LKSLCNQGKSGQADDLLRMMAEGGAVCSPDVVAYTTVIDGFFKEGDVNKACDLFKEMVQR 248
Query: 518 GVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQKDTPGA 577
G+ Y+S++ A +A + A LR + G+ + Y L+ A
Sbjct: 249 GIPPDFVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPNNWTYNNLIYGYSSTGQWKEA 308
Query: 578 LHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRIDCGVHDWNNVI 637
+ +FKEM+ I LL V + N ++
Sbjct: 309 VRVFKEMRRHNI--------------------------LLDVV-----------NLNTLM 331
Query: 638 HFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEM 692
CK +++A M G PN ++ M+ GYA G ++T+L+ M
Sbjct: 332 GSLCKYGKIKEARDVFDTMAMKGQNPNVFSYTIMLNGYAT-KGCLVDMTDLFDLM 385
>gi|15240891|ref|NP_195731.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174092|sp|Q9LFC5.1|PP360_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g01110
gi|6759434|emb|CAB69839.1| putative protein [Arabidopsis thaliana]
gi|28973740|gb|AAO64186.1| unknown protein [Arabidopsis thaliana]
gi|110736884|dbj|BAF00399.1| hypothetical protein [Arabidopsis thaliana]
gi|332002917|gb|AED90300.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 729
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/247 (22%), Positives = 108/247 (43%), Gaps = 11/247 (4%)
Query: 502 GWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCY 561
G ++A ++ EM +G+ S+ Y SLL + E + D RS + D C+
Sbjct: 319 GKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCF 378
Query: 562 EALLQSKIVQKDTPGALHLFKEMKESK-IPRSGHQEFEMLVKGCAQNHEAGLMAKLLQE- 619
+++ + AL F +KE+ IP + + +L++G + + L E
Sbjct: 379 SSMMSLFTRSGNLDKALMYFNSVKEAGLIP--DNVIYTILIQGYCRKGMISVAMNLRNEM 436
Query: 620 VKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIG 679
+++G +D V +N ++H CK++++ +A+K M P++ T ++ G+ +
Sbjct: 437 LQQGCAMD--VVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKL- 493
Query: 680 GKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFID 739
G EL+ +MK + D +++L F + G A E+ A M ++
Sbjct: 494 GNLQNAMELFQKMK----EKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPT 549
Query: 740 KYKYRTL 746
Y L
Sbjct: 550 PISYSIL 556
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/184 (22%), Positives = 76/184 (41%), Gaps = 36/184 (19%)
Query: 494 VITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAG 553
V LC S G L +A + DEM ++ + + S++K Y + + + L S G
Sbjct: 557 VNALC-SKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEG 615
Query: 554 IQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLM 613
D Y L+ + +++ A L K+M+E + GL+
Sbjct: 616 FVPDCISYNTLIYGFVREENMSKAFGLVKKMEE---------------------EQGGLV 654
Query: 614 AKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVT 673
V +N+++H FC++ M++AE L++M G P+ T+ M+
Sbjct: 655 PD--------------VFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMIN 700
Query: 674 GYAA 677
G+ +
Sbjct: 701 GFVS 704
Score = 48.1 bits (113), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 41/191 (21%), Positives = 89/191 (46%), Gaps = 4/191 (2%)
Query: 521 ASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHL 580
++ SV+ L++ Y++A + RE RS G + AL+ S + A +
Sbjct: 163 SNDSVFDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGV 222
Query: 581 FKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFF 640
++E+ S + + + ++V ++ + + L +V+E + + + +N +I +
Sbjct: 223 YQEISRSGVGINVYT-LNIMVNALCKDGKMEKVGTFLSQVQE-KGVYPDIVTYNTLISAY 280
Query: 641 CKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEM-KSFASST 699
K LM++A + + M G P T+++++ G GKY E++ EM +S S
Sbjct: 281 SSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCK-HGKYERAKEVFAEMLRSGLSPD 339
Query: 700 SMNFDEELLDS 710
S + L+++
Sbjct: 340 STTYRSLLMEA 350
Score = 47.0 bits (110), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 73/336 (21%), Positives = 129/336 (38%), Gaps = 42/336 (12%)
Query: 447 LQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQ 506
L P Y L+ + G E ++ + V D +++L G LD+
Sbjct: 336 LSPDSTTYRSLLMEACKKGDVVETEKVF--SDMRSRDVVPDLVCFSSMMSLFTRSGNLDK 393
Query: 507 AHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQ 566
A + + AG+ + +Y L++ Y L + G +D Y +L
Sbjct: 394 ALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILH 453
Query: 567 SKIVQKDTPGALHLFKEMKESKI-PRSGHQEFEMLVKG-CAQNHEAGLMAKLLQEVKEGQ 624
+K A LF EM E + P S +L+ G C + M +L Q++KE +
Sbjct: 454 GLCKRKMLGEADKLFNEMTERALFPDS--YTLTILIDGHCKLGNLQNAM-ELFQKMKE-K 509
Query: 625 RIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTE 684
RI V +N ++ F K + A++ M S LP ++ +V + G E
Sbjct: 510 RIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCS-KGHLAE 568
Query: 685 VTELWGEM--------------------KSFASSTSMNFDEELL-----------DSVLY 713
+W EM +S +S +F E+++ ++++Y
Sbjct: 569 AFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIY 628
Query: 714 TFVRGGFFARANEVVAMMEE--GKMFIDKYKYRTLF 747
FVR ++A +V MEE G + D + Y ++
Sbjct: 629 GFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSIL 664
Score = 46.2 bits (108), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 66/346 (19%), Positives = 125/346 (36%), Gaps = 71/346 (20%)
Query: 451 EKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQAHDL 510
+ ++ L++ +++A K +E + VS D A +I + +GW++ A +
Sbjct: 165 DSVFDLLIRTYVQARKLREAHEAFTLLRSKGFTVSID--ACNALIGSLVRIGWVELAWGV 222
Query: 511 LDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIV 570
E+ +GV + ++ A + + +V L + G+ D Y L+ +
Sbjct: 223 YQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSS 282
Query: 571 QKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRIDCGV 630
+ A L M G+ GV
Sbjct: 283 KGLMEEAFELMNAMP-------------------------------------GKGFSPGV 305
Query: 631 HDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWG 690
+ +N VI+ CK + A++ M G P++ T+ S++ A G E +++
Sbjct: 306 YTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLM-EACKKGDVVETEKVFS 364
Query: 691 EMKS---------FASSTSM-----NFDEELL------------DSVLYTFVRGGFFARA 724
+M+S F+S S+ N D+ L+ D+V+YT + G+ +
Sbjct: 365 DMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKG 424
Query: 725 NEVVAMMEEGKMF-----IDKYKYRTLFLKYHKTLYKGKTPKFQTE 765
VAM +M +D Y T+ K G+ K E
Sbjct: 425 MISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNE 470
>gi|297744958|emb|CBI38550.3| unnamed protein product [Vitis vinifera]
Length = 795
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 65/279 (23%), Positives = 124/279 (44%), Gaps = 19/279 (6%)
Query: 497 LCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQL 556
LC + G +++ DLL++M + G + + + ++L A ++ R + + G++L
Sbjct: 481 LCAA-GEIEKTMDLLNDMLVMGFHPTPTTHKAVLDASSKSRRADVILHMHDQLVGMGVKL 539
Query: 557 DASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKG-CAQNHEAGLMAK 615
D S Y L+ + A +FK+M I + + L+ G C +H A
Sbjct: 540 DLSTYNTLISTFCRLGMIRRATLVFKDMMGKGI-LADIITYNALIHGYCISSHLKKAFAV 598
Query: 616 LLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGY 675
Q + EG + V +N ++ RL+++A + +M+ G +PNA T+ +V+G+
Sbjct: 599 HSQMLTEG--VSPNVETYNILLGGLSAARLIKEAAGLVNQMKERGLVPNATTYDILVSGH 656
Query: 676 AAIGGKYTEVTELWGEM--KSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEE 733
I G E +L+ EM K F T + ++ F +G ++A E++ M+
Sbjct: 657 GKI-GNMKECVKLYCEMITKGFVPKT------RTYNVLISCFAKGKKMSQAKELMQEMQV 709
Query: 734 GKMFIDKYKYRTLFLKYHK-----TLYKGKTPKFQTEAQ 767
+ + Y L ++K L K +Q EA+
Sbjct: 710 RGIPPNSSTYDILICGWYKLSKQPELNKSLKRSYQAEAK 748
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 61/257 (23%), Positives = 113/257 (43%), Gaps = 10/257 (3%)
Query: 497 LCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQL 556
LC S G +++A + EM GV + YA+L+ + + E L GI
Sbjct: 132 LCKS-GKVEEAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGF 190
Query: 557 DASCYEALLQSKIVQKDTPGALHLFKEM-KESKIPRSGHQEFEMLVKGCAQNHEAGLMAK 615
D Y AL+ A +F+ + +ES +P + L+ G + +
Sbjct: 191 DVVVYTALMDGLFKAGMANNAEDMFQVLLEESLVPNC--VTYSALIDGHCKLGDVNKGEL 248
Query: 616 LLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGY 675
LLQE++E + I V +++++ + KK L+ +A +++M LPN + +++ GY
Sbjct: 249 LLQEMEE-KHIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGY 307
Query: 676 AAIGGKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGK 735
+ + +L+ EMKS + NF ++DS + R G A+E+ M
Sbjct: 308 FKADQRGIAL-DLFKEMKSRGLEEN-NF---VIDSFVNNLKRSGRMEEADELFKDMMSRG 362
Query: 736 MFIDKYKYRTLFLKYHK 752
+ D+ Y ++ + K
Sbjct: 363 LLPDRVNYTSMMDGFFK 379
>gi|356529507|ref|XP_003533332.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Glycine max]
Length = 546
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 81/171 (47%), Gaps = 4/171 (2%)
Query: 503 WLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYE 562
+D+A +L EMH + Y+SL+ ++ R V L+ + R GI + Y
Sbjct: 354 MVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRISYVWDLIDEMRDRGIPANVITYN 413
Query: 563 ALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQE-VK 621
+L+ A+ LF +MK+ I R F +L+ G + + Q+ +
Sbjct: 414 SLIDGLCKNGHLDRAIALFNKMKDQGI-RPCSFTFTILLDGLCKGGRLKDAQEAFQDLLT 472
Query: 622 EGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMV 672
+G +D V+ +N +I+ CK+ L+++A L +M G +PNA TF ++
Sbjct: 473 KGYHLD--VYKYNVMINGHCKQGLLEEALTMLSKMEENGCVPNAVTFDIII 521
Score = 48.9 bits (115), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 62/320 (19%), Positives = 121/320 (37%), Gaps = 42/320 (13%)
Query: 448 QPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQA 507
QP + L+K G+ + HF K + ++ D + G +I +G A
Sbjct: 126 QPHTITFTTLIKGLCLKGQVNKALHFHDKLLAQGIKF--DQVSYGTLINGVCKIGDTRGA 183
Query: 508 HDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQS 567
L+ ++ + + +Y +++ A + E L + + GI D Y L+
Sbjct: 184 IKLVRKIDGRLTKPNVEMYNTIIDALCKYQLVSEAYGLFSEMTAKGISADVVTYTTLIYG 243
Query: 568 KIVQKDTPGALHLFKEM--------------------KESKIPRSGHQEFEMLVKGCAQN 607
+ A+ L EM KE K+ + +++K C +
Sbjct: 244 FCIASKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKV-KEAKNVLAVMLKACVKP 302
Query: 608 H---EAGLMAK--LLQEVKEGQRI---------DCGVHDWNNVIHFFCKKRLMQDAEKAL 653
+ LM L+ E+K+ Q + VH + +I+ FCK +++ +A
Sbjct: 303 DVITYSTLMDGYFLVYELKKAQHVFNAMSLMGVTPDVHSYTILINGFCKNKMVDEALNLF 362
Query: 654 KRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEMKSFASSTSMNFDEELLDSVLY 713
K M +P T+ S++ G G+ + V +L EM+ ++ L+D +
Sbjct: 363 KEMHQKNMVPGIVTYSSLIDGLCK-SGRISYVWDLIDEMRDRGIPANVITYNSLIDGL-- 419
Query: 714 TFVRGGFFARANEVVAMMEE 733
+ G RA + M++
Sbjct: 420 --CKNGHLDRAIALFNKMKD 437
Score = 40.8 bits (94), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 46/236 (19%), Positives = 92/236 (38%), Gaps = 10/236 (4%)
Query: 447 LQPTEKIYIKLVKAFLEAGKTKELTHFL---IKAEKENLQVSHDDAALGHVITLCISLGW 503
+ P Y LV A + GK KE + L +KA + +++ G+ +
Sbjct: 265 INPNVYTYNILVDALCKEGKVKEAKNVLAVMLKACVKPDVITYSTLMDGYFLVY-----E 319
Query: 504 LDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEA 563
L +A + + M L GV Y L+ + + E L ++ + Y +
Sbjct: 320 LKKAQHVFNAMSLMGVTPDVHSYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSS 379
Query: 564 LLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEG 623
L+ L EM++ IP + + L+ G +N L ++K+
Sbjct: 380 LIDGLCKSGRISYVWDLIDEMRDRGIP-ANVITYNSLIDGLCKNGHLDRAIALFNKMKD- 437
Query: 624 QRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIG 679
Q I + ++ CK ++DA++A + + + G+ + ++ M+ G+ G
Sbjct: 438 QGIRPCSFTFTILLDGLCKGGRLKDAQEAFQDLLTKGYHLDVYKYNVMINGHCKQG 493
>gi|299471535|emb|CBN80021.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 607
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/249 (24%), Positives = 113/249 (45%), Gaps = 7/249 (2%)
Query: 447 LQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQ 506
+ P IY + + +AG+ E+ L+K E + ++ D + I+ C G ++
Sbjct: 134 VTPNVIIYNSAINSCAKAGQW-EIAVSLVK-EMATVGLAPDVISYSSAISACGRGGRWEE 191
Query: 507 AHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQ 566
A +L ++M +GV Y S + A R +E +LLR + G+ + Y +++
Sbjct: 192 ALELFEDMRTSGVAPDVITYGSAIAACANGGRWKEAVSLLRKIPTVGLTPNVISYSSVIT 251
Query: 567 SKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKE-GQR 625
+ + AL L +EMK ++ + + + CA+ LL+E+ G
Sbjct: 252 ACAKEGQWKIALDLLREMKAMRLAPN-IITYNAAIDACAKGGRWKEAIDLLREMPTVGLP 310
Query: 626 IDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEV 685
D V +++VI K ++A L+ M ++G PNA +++S + A GG++ E
Sbjct: 311 PD--VVSYSSVIDACSKGDRWKEAIDILREMPTVGLSPNAISYNSAIDACAK-GGQWKEA 367
Query: 686 TELWGEMKS 694
L EM +
Sbjct: 368 KGLLREMPT 376
Score = 47.4 bits (111), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 75/344 (21%), Positives = 129/344 (37%), Gaps = 50/344 (14%)
Query: 447 LQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQ 506
L P Y + A + G+ KE L E + + D + VI C +
Sbjct: 274 LAPNIITYNAAIDACAKGGRWKEAIDLL--REMPTVGLPPDVVSYSSVIDACSKGDRWKE 331
Query: 507 AHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQ 566
A D+L EM G+ ++ Y S + A + + +E LLR+ +AG+ Y + +
Sbjct: 332 AIDILREMPTVGLSPNAISYNSAIDACAKGGQWKEAKGLLREMPTAGVTQRVIGYNSAIA 391
Query: 567 SKIVQKDTPGALHLFKEMK-----------ESKIPRSGHQEF---------EMLVKG--- 603
+ + AL L +EM S I G EM G
Sbjct: 392 ACAKGEQWKEALALLREMPTVGLHTTVFSYSSAIDACGKGNLWIKAKELLREMATVGLAP 451
Query: 604 -----------CAQNHEAGLMAKLLQEVKE-GQRIDCGVHDWNNVIHFFCKKRLMQDAEK 651
C + + LL+E+ G D V +++ I K ++A
Sbjct: 452 NEVCYNSAIDACGRGDQWEEAVDLLREMPTVGLSPD--VFSYSSAIAACAKGDQWKEALA 509
Query: 652 ALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEMKSFASSTSMNFDEELLDSV 711
LK M + G P+ ++S + + GG++ L GEM++ + ++ +D+
Sbjct: 510 VLKEMSAAGLAPDLICYNSAIDACSK-GGRWKMAVALLGEMRAAGLTPNIISYSSAIDAC 568
Query: 712 LYTFVRGGFFARANEVVAMMEEGK---MFIDKYKYRTLFLKYHK 752
VRGG + E +A++EE + + D Y L + K
Sbjct: 569 ----VRGGQW---KEGIALLEEMRGSGVVPDVITYHALMVTCAK 605
Score = 42.0 bits (97), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 46/195 (23%), Positives = 83/195 (42%), Gaps = 5/195 (2%)
Query: 495 ITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGI 554
IT C G +QA LL EM G S Y++++ A + + + L + + GI
Sbjct: 40 ITACGRGGQWEQAVRLLREMPTEGAAPDLSAYSAVIDACAKGGQWKMAVFFLMEMPTKGI 99
Query: 555 QLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMA 614
DA Y A + + AL L +EM + + + + CA+ + +
Sbjct: 100 APDARSYGAAINACARGGRWKIALDLLREMLARDVTPN-VIIYNSAINSCAKAGQWEIAV 158
Query: 615 KLLQEVKE-GQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVT 673
L++E+ G D V +++ I + ++A + + MR+ G P+ T+ S +
Sbjct: 159 SLVKEMATVGLAPD--VISYSSAISACGRGGRWEEALELFEDMRTSGVAPDVITYGSAIA 216
Query: 674 GYAAIGGKYTEVTEL 688
A GG++ E L
Sbjct: 217 A-CANGGRWKEAVSL 230
>gi|334183602|ref|NP_176522.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806282|sp|Q9C8T7.2|PP101_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g63330
gi|332195966|gb|AEE34087.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 559
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 91/224 (40%), Gaps = 34/224 (15%)
Query: 504 LDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEA 563
LD+A + + M Y +L+K + ++ R + T L R+ G+ D Y
Sbjct: 306 LDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTT 365
Query: 564 LLQSKIVQKDTPGALHLFKEMKESKIP--------------RSGHQEFEMLVKGCAQNHE 609
L+Q D A +FK+M +P +G E + V Q E
Sbjct: 366 LIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSE 425
Query: 610 AGLMAKLLQEVKEGQ----RIDCG---------------VHDWNNVIHFFCKKRLMQDAE 650
L + + EG ++D G V +N +I C KRL+Q+A
Sbjct: 426 IKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAY 485
Query: 651 KALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEMKS 694
LK+M+ G LP++ T+++++ + G K EL EM+S
Sbjct: 486 ALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAAS-AELIREMRS 528
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 62/281 (22%), Positives = 117/281 (41%), Gaps = 9/281 (3%)
Query: 480 ENLQVSHDDAALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRP 539
+ L +SH+ +I + A LL +M G S +SLL Y R
Sbjct: 37 QRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRI 96
Query: 540 REVTALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEM 599
+ AL+ G + D + L+ + A+ L M + + + +
Sbjct: 97 SDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGC-QPNLVTYGV 155
Query: 600 LVKGCAQNHEAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSL 659
+V G + + L LL ++ E +I+ V +N +I CK R + DA K M +
Sbjct: 156 VVNGLCKRGDIDLAFNLLNKM-EAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETK 214
Query: 660 GHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGG 719
G PN T+ S+++ + G++++ ++L +M +N + ++++ FV+ G
Sbjct: 215 GIRPNVVTYSSLISCLCSY-GRWSDASQLLSDM----IEKKINPNLVTFNALIDAFVKEG 269
Query: 720 FFARANEVVAMMEEGKMFIDKYKYRTLFLKY--HKTLYKGK 758
F A ++ M + + D + Y +L + H L K K
Sbjct: 270 KFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAK 310
>gi|357139998|ref|XP_003571561.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
distachyon]
Length = 807
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 91/203 (44%), Gaps = 4/203 (1%)
Query: 494 VITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPRE-VTALLRDARSA 552
+I C LD A + G++A V +SLL+ +A R E V L
Sbjct: 109 LIDCCCRARRLDLAFAFFGCLLRQGMKADVIVVSSLLRGLCDAKRTDEAVDVLFHRMPEL 168
Query: 553 GIQLDASCYEALLQSKIVQKDTPGALHLFK-EMKESKIPRSGHQEFEMLVKGCAQNHEAG 611
G DA Y +L+S + AL + + +K+ + +V G + + G
Sbjct: 169 GCVPDAISYSTVLKSVCDDGRSQWALDILRMAVKQGGGCPCNVVVYSTVVHGLFKEGKVG 228
Query: 612 LMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSM 671
L E+ + Q + V +N+VIH CK R + A+ L++M G P+ T++++
Sbjct: 229 EACDLFHEMTQ-QGVPPNVVTYNSVIHALCKARAVDKAQGILRQMVGNGVQPDNVTYNTL 287
Query: 672 VTGYAAIGGKYTEVTELWGEMKS 694
+ GY+ + G++ + ++ EM S
Sbjct: 288 IHGYSTL-GQWKQAVRMFKEMTS 309
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 97/525 (18%), Positives = 183/525 (34%), Gaps = 116/525 (22%)
Query: 94 SAEIENAINEHRYGDAWKLYEQHMQMDGFPRKTLVNKILTSFVESLDSKWLEKAYGLVEQ 153
S + E + G+A L+ + Q P N ++ + ++ + ++KA G++ Q
Sbjct: 215 STVVHGLFKEGKVGEACDLFHEMTQQGVPPNVVTYNSVIHALCKA---RAVDKAQGILRQ 271
Query: 154 AFEEGKQILLEKEPLIYLSL--GLSKCGLPVPASTILRKLVATEQYPPVTAWSAILAHM- 210
G Q + + Y +L G S G A + +++ + P S +A +
Sbjct: 272 MVGNGVQ----PDNVTYNTLIHGYSTLGQWKQAVRMFKEMTSRGVIPNTVTCSTFVAFLC 327
Query: 211 -------------SLTAPG-------------AYLAAELILEIGYLF----QDGRVDPRK 240
S+ A G Y A ++++ LF +DG V
Sbjct: 328 KHGRIEEAREFFDSMLAKGHKLNIISYSTLLHGYATAGCLVDMSNLFNLMVRDGIV---- 383
Query: 241 KCNAPLIAMKPNTNTFNIALAGCLLFETTRKAEQLLDIMPRIGVKADSNLLIIMAHIYER 300
PN + FNI + G R+A + + M + G+ D + + H + R
Sbjct: 384 ----------PNQHVFNILVNGYAKCGMVREAMFIFEDMQKRGLNPDVLTYLAVIHAFCR 433
Query: 301 NGRREE-LRKLQRHIDEAVNLSDIQFRQFYNCLLSCHLKFGDLNSASKMVLEMLQRAKEA 359
G ++ + K ID+ V + Y CL+ GDL A ++V E+ +
Sbjct: 434 MGSMDDAMDKFNHMIDKGVEPN----FAVYQCLIQGFCTHGDLVKAEELVYEIRNKG--- 486
Query: 360 RNSLAAAMLPFNAVGVNNRTPSEQNVNCTNSVDLENSGIIENHILSYEDFTKDRKFVALE 419
L +L F + + NH+ + R F
Sbjct: 487 ---LGPCILSFAS--------------------------LINHLCK-----EGRVF---- 508
Query: 420 AEVKRVLQTLLGMLQKQVELITTEHGILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEK 479
E +R+ ++ +K I+ L+ + GK E F +
Sbjct: 509 -EAQRIFDMIIRTGEKA-------------DVNIFTSLIDGYCLIGKMSE--AFRVHDAM 552
Query: 480 ENLQVSHDDAALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRP 539
++ + D G ++ C G +D L E+ GV+ ++ Y +L A R
Sbjct: 553 VSVGIEPDIVTYGTLVNGCCKNGRIDDGLILFRELLHKGVKPTTFTYGIILDGLFHAGRT 612
Query: 540 REVTALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEM 584
+ ++ +GI + Y LL T A+ +F+++
Sbjct: 613 AAAKEMFQEMIESGIAVTIPTYSILLTGLCRNNCTEEAITVFQKL 657
Score = 44.7 bits (104), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 51/257 (19%), Positives = 103/257 (40%), Gaps = 14/257 (5%)
Query: 442 TEHGILQPTEKIYIKLVKAFLEAGKTKELTHF----LIKAEKENLQVSHDDAALGHVITL 497
T G++ P V + G+ +E F L K K N+ +S+ G+
Sbjct: 308 TSRGVI-PNTVTCSTFVAFLCKHGRIEEAREFFDSMLAKGHKLNI-ISYSTLLHGYA--- 362
Query: 498 CISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLD 557
+ G L +L + M G+ + V+ L+ Y + RE + D + G+ D
Sbjct: 363 --TAGCLVDMSNLFNLMVRDGIVPNQHVFNILVNGYAKCGMVREAMFIFEDMQKRGLNPD 420
Query: 558 ASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLL 617
Y A++ + A+ F M + + ++ L++G + + +L+
Sbjct: 421 VLTYLAVIHAFCRMGSMDDAMDKFNHMIDKGV-EPNFAVYQCLIQGFCTHGDLVKAEELV 479
Query: 618 QEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAA 677
E++ C + + ++I+ CK+ + +A++ + G + F S++ GY
Sbjct: 480 YEIRNKGLGPC-ILSFASLINHLCKEGRVFEAQRIFDMIIRTGEKADVNIFTSLIDGYCL 538
Query: 678 IGGKYTEVTELWGEMKS 694
I GK +E + M S
Sbjct: 539 I-GKMSEAFRVHDAMVS 554
Score = 44.3 bits (103), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 76/198 (38%), Gaps = 9/198 (4%)
Query: 500 SLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDAS 559
+LG QA + EM GV ++ ++ + + R E + G +L+
Sbjct: 293 TLGQWKQAVRMFKEMTSRGVIPNTVTCSTFVAFLCKHGRIEEAREFFDSMLAKGHKLNII 352
Query: 560 CYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKG---CAQNHEAGLMAKL 616
Y LL +LF M I + H F +LV G C EA + +
Sbjct: 353 SYSTLLHGYATAGCLVDMSNLFNLMVRDGIVPNQHV-FNILVNGYAKCGMVREAMFIFED 411
Query: 617 LQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYA 676
+Q K G D V + VIH FC+ M DA M G PN + ++ G+
Sbjct: 412 MQ--KRGLNPD--VLTYLAVIHAFCRMGSMDDAMDKFNHMIDKGVEPNFAVYQCLIQGFC 467
Query: 677 AIGGKYTEVTELWGEMKS 694
G + EL E+++
Sbjct: 468 T-HGDLVKAEELVYEIRN 484
>gi|145336953|ref|NP_176455.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806497|sp|Q3ECK2.2|PPR92_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g62680, mitochondrial; Flags: Precursor
gi|332195872|gb|AEE33993.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 548
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 62/258 (24%), Positives = 106/258 (41%), Gaps = 23/258 (8%)
Query: 504 LDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEA 563
++ A D E+ G+R + Y +L+ ++R + LL D I + Y A
Sbjct: 206 VNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSA 265
Query: 564 LLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKG-CAQNH--EAGLMAKLLQEV 620
LL + + A LF+EM I + L+ G C + EA M L+ V
Sbjct: 266 LLDAFVKNGKVLEAKELFEEMVRMSID-PDIVTYSSLINGLCLHDRIDEANQMFDLM--V 322
Query: 621 KEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGG 680
+G D V +N +I+ FCK + ++D K + M G + N T+++++ G+ G
Sbjct: 323 SKGCLAD--VVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQ-AG 379
Query: 681 KYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGF-----FARANEVVAMMEEGK 735
+ E + +M F S D Y + GG +A + M++ +
Sbjct: 380 DVDKAQEFFSQMDFFGISP---------DIWTYNILLGGLCDNGELEKALVIFEDMQKRE 430
Query: 736 MFIDKYKYRTLFLKYHKT 753
M +D Y T+ KT
Sbjct: 431 MDLDIVTYTTVIRGMCKT 448
Score = 44.3 bits (103), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 43/195 (22%), Positives = 79/195 (40%), Gaps = 2/195 (1%)
Query: 480 ENLQVSHDDAALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRP 539
E L + +D VI + A +L +M G SL+ + NR
Sbjct: 112 EVLGIRNDLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRV 171
Query: 540 REVTALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEM 599
+ +L+ G + D Y A++ S K A FKE+ E K R +
Sbjct: 172 SDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEI-ERKGIRPNVVTYTA 230
Query: 600 LVKGCAQNHEAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSL 659
LV G + A+LL ++ + ++I V ++ ++ F K + +A++ + M +
Sbjct: 231 LVNGLCNSSRWSDAARLLSDMIK-KKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRM 289
Query: 660 GHLPNAQTFHSMVTG 674
P+ T+ S++ G
Sbjct: 290 SIDPDIVTYSSLING 304
>gi|297607630|ref|NP_001060305.2| Os07g0621100 [Oryza sativa Japonica Group]
gi|255677977|dbj|BAF22219.2| Os07g0621100 [Oryza sativa Japonica Group]
Length = 734
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 63/254 (24%), Positives = 116/254 (45%), Gaps = 20/254 (7%)
Query: 446 ILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLD 505
I++P + +++ + G+ ++ F ++A E + + +++T + +G L
Sbjct: 322 IVKPNVVTFNSVIQGLCDIGRMRQ--AFQVRAMME------ETGCMVNLVTYNLLIGGLL 373
Query: 506 QAH------DLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDAS 559
+ H +L+DEM G+ S Y+ L+K + + + LL R GI+ +
Sbjct: 374 RVHKVRKAMELMDEMTSLGLEPDSFTYSILIKGFCKMWQVDRAEDLLSTMRDRGIEPELF 433
Query: 560 CYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQE 619
Y LL + Q A +LF EM ++ P + ++ G + + +LL+
Sbjct: 434 HYIPLLVAMCEQGMMERARNLFNEM-DNNFPLD-VVAYSTMIHGACKAGDLKTAKELLKS 491
Query: 620 -VKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAI 678
V EG D ++ VI+ F K M+ A LK+M + G LP+ F S++ GY+
Sbjct: 492 IVDEGLTPDAVT--YSIVINMFAKSGDMEAANGVLKQMTASGFLPDVAVFDSLIQGYST- 548
Query: 679 GGKYTEVTELWGEM 692
G+ +V EL EM
Sbjct: 549 KGEINKVLELIREM 562
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 73/316 (23%), Positives = 132/316 (41%), Gaps = 51/316 (16%)
Query: 444 HGILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGW 503
H +P Y L++A L A + + L+++ + + V D G +I
Sbjct: 108 HPACRPNAVSYTVLMRA-LCADRLADQAVGLLRSMR-SAGVRADVVTYGTLIRGLCDAAE 165
Query: 504 LDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEA 563
+D+A +L+ EM +G+ + VY+SLL+ Y ++ R +V + + GI+ D Y
Sbjct: 166 VDKAVELMGEMCESGIEPNVVVYSSLLQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTG 225
Query: 564 LLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEG 623
L+ S L K K K H +M+V+
Sbjct: 226 LIDS------------LCKVGKAKK----AHGVMDMMVR--------------------- 248
Query: 624 QRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYT 683
+ ++ V +N +I+ CK+ +++A LK+M G P+ T+++++ G + + +
Sbjct: 249 RGLEPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDV-LEMD 307
Query: 684 EVTELWGEM---KSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFIDK 740
E L EM K+ + F +SV+ G +A +V AMMEE ++
Sbjct: 308 EAMWLLEEMVRGKNIVKPNVVTF-----NSVIQGLCDIGRMRQAFQVRAMMEETGCMVNL 362
Query: 741 YKYRTL---FLKYHKT 753
Y L L+ HK
Sbjct: 363 VTYNLLIGGLLRVHKV 378
>gi|356575482|ref|XP_003555869.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g35130-like [Glycine max]
Length = 576
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 64/306 (20%), Positives = 129/306 (42%), Gaps = 17/306 (5%)
Query: 449 PTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQAH 508
PTE Y L+KA+ +G ++ AE N + I + G D+A
Sbjct: 188 PTEDTYALLIKAYCISGLLEKAEAVF--AEMRNYGLPSSAVVYNAYINGLMKGGNSDKAE 245
Query: 509 DLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSK 568
++ M + ++ Y L+ Y +A + L + S + + Y AL+ +
Sbjct: 246 EIFKRMKKDACKPTTETYTMLINLYGKAGKSFMALKLFHEMMSHDCKPNICTYTALVNAF 305
Query: 569 IVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQN---HEAGLMAKLLQEVK-EGQ 624
+ A +F++M+E+ + + + L++ ++ + A + L+Q + E
Sbjct: 306 AREGLCEKAEEVFEQMQEAGLEPDVYA-YNALMEAYSRAGYPYGAAEIFSLMQHMGCEPD 364
Query: 625 RIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTE 684
R +N ++ + K DAE K M+ +G P ++ +++ Y+ +G +
Sbjct: 365 R-----ASYNILVDAYGKAGFQDDAEAVFKDMKRVGITPTMKSHMVLLSAYSKMGS-VNK 418
Query: 685 VTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFIDKYKYR 744
E+ +M + + D +L+S+L + R G F + EV+ +ME+G D Y
Sbjct: 419 CEEILNQM----CKSGLKLDTYVLNSMLNLYGRLGQFGKMEEVLRVMEKGSYVADISTYN 474
Query: 745 TLFLKY 750
L +Y
Sbjct: 475 ILINRY 480
Score = 42.0 bits (97), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 48/236 (20%), Positives = 95/236 (40%), Gaps = 12/236 (5%)
Query: 448 QPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISL----GW 503
+PT + Y L+ + +AGK+ +K E +SHD T ++ G
Sbjct: 257 KPTTETYTMLINLYGKAGKS----FMALKLFHE--MMSHDCKPNICTYTALVNAFAREGL 310
Query: 504 LDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEA 563
++A ++ ++M AG+ Y +L++AY A P + + G + D + Y
Sbjct: 311 CEKAEEVFEQMQEAGLEPDVYAYNALMEAYSRAGYPYGAAEIFSLMQHMGCEPDRASYNI 370
Query: 564 LLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEG 623
L+ + A +FK+MK I + +L L Q K G
Sbjct: 371 LVDAYGKAGFQDDAEAVFKDMKRVGITPTMKSHMVLLSAYSKMGSVNKCEEILNQMCKSG 430
Query: 624 QRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIG 679
++D V N++++ + + E+ L+ M ++ + T++ ++ Y G
Sbjct: 431 LKLDTYV--LNSMLNLYGRLGQFGKMEEVLRVMEKGSYVADISTYNILINRYGQAG 484
>gi|357449339|ref|XP_003594946.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|124359380|gb|ABN05846.1| Tetratricopeptide-like helical [Medicago truncatula]
gi|355483994|gb|AES65197.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 849
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 73/346 (21%), Positives = 139/346 (40%), Gaps = 53/346 (15%)
Query: 447 LQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQ 506
L PT Y ++ + + G+ + L+ E + + D+ VI+ C G LD+
Sbjct: 268 LDPTLVTYNVMLDVYGKMGRAWSMILELLD-EMRSKGLEFDEFTCTTVISACGREGILDE 326
Query: 507 AHDLLDEMHLAGVRASSSVYASLLK----------------------------------- 531
A D++ L G + ++ Y S+L+
Sbjct: 327 ARRFFDDLKLNGYKPGTATYNSMLQVFGKAGVYTEALNILKEMEDNNCEPDAITYNELVA 386
Query: 532 AYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKE-SKIP 590
AY+ A E A++ S G+ +A Y ++ + D AL +F +MKE +P
Sbjct: 387 AYVRAGFHDEGAAVIDTMASKGVMPNAITYTTVINAYGKAGDADKALEVFGQMKELGCVP 446
Query: 591 RSGHQEFEMLVKGCAQNHEAGLMAKLLQEVK----EGQRIDCGVHDWNNVIHFFCKKRLM 646
+++ G E M K+L ++K RI WN ++ +K
Sbjct: 447 NVCTYNNVLVLLGKRSRSED--MIKILCDMKLNGCPPDRIT-----WNTMLAVCGEKGKQ 499
Query: 647 QDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEMKSFASSTSMNFDEE 706
+ + L+ M++ G P+ +TF+++++ Y G + +V +++GEM + + +
Sbjct: 500 KFVSQVLREMKNCGFEPDKETFNTLISAYGRCGSE-VDVAKMYGEMVAAGFTPCITTYNA 558
Query: 707 LLDSVLYTFVRGGFFARANEVVAMMEEGKMFIDKYKYRTLFLKYHK 752
LL+++ R G + A VV M + ++ Y L Y K
Sbjct: 559 LLNAL----ARRGNWKAAESVVLDMRKKGFKPNETSYSLLLHCYSK 600
Score = 43.9 bits (102), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 38/205 (18%), Positives = 83/205 (40%), Gaps = 42/205 (20%)
Query: 504 LDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEA 563
L++AH++LD +H++G++ + Y SL+ Y + +L+D +++GI D Y
Sbjct: 674 LEKAHEMLDVIHVSGLQPNLVTYNSLIDLYARVGDCWKAEEMLKDIQNSGISPDVVSYNT 733
Query: 564 LLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEG 623
+++ + A+ + EM + V+ C
Sbjct: 734 VIKGFCKKGLVQEAIRILSEMTANG------------VQPCPIT---------------- 765
Query: 624 QRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYT 683
+N + + L +A++ ++ M G +PN T+ ++ GY K+
Sbjct: 766 ---------FNTFMSCYAGNGLFAEADEVIRYMIEHGCMPNELTYKIVIDGYIK-AKKHK 815
Query: 684 EVTELWGEMKSFASSTSMNFDEELL 708
E + ++K ++FD++ L
Sbjct: 816 EAMDFVSKIKEI----DISFDDQSL 836
>gi|356529503|ref|XP_003533330.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Glycine max]
Length = 546
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 83/171 (48%), Gaps = 4/171 (2%)
Query: 503 WLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYE 562
+D+A +L EMH + Y+SL+ ++ R V L+ + R G D Y
Sbjct: 354 MVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRIPYVWDLIDEMRDRGQPADVITYS 413
Query: 563 ALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQE-VK 621
+L+ A+ LF +MK+ +I R F +L+ G + ++ Q+ +
Sbjct: 414 SLIDGLCKNGHLDRAIALFNKMKDQEI-RPNIFTFTILLDGLCKGGRLKDAQEVFQDLLT 472
Query: 622 EGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMV 672
+G ++ V+ +N +I+ CK+ L+++A L +M G +PNA TF +++
Sbjct: 473 KGYHLN--VYTYNVMINGHCKQGLLEEALTMLSKMEDNGCIPNAFTFETII 521
Score = 47.8 bits (112), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 63/325 (19%), Positives = 123/325 (37%), Gaps = 42/325 (12%)
Query: 457 LVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQAHDLLDEMHL 516
L+K G+ K+ HF K + Q++ + +I +G A LL ++
Sbjct: 135 LIKGLCLKGQVKKALHFHDKLLAQGFQLNQ--VSYATLINGVCKIGDTRGAIKLLRKIDG 192
Query: 517 AGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQKDTPG 576
+ + +Y++++ A + E L + GI D Y L+ ++
Sbjct: 193 RLTKPNVEMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIEGKLKE 252
Query: 577 ALHLFKEM--------------------KESKIPRSGHQEFEMLVKGCAQNH---EAGLM 613
A+ L EM KE K+ + +++K C + + LM
Sbjct: 253 AIGLLNEMVLKTINPNVYTYNILVDALCKEGKV-KEAKSVLAVMLKACVKPDVITYSTLM 311
Query: 614 AK--LLQEVKEGQRI---------DCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHL 662
L+ EVK+ Q + VH + +I+ FCK +++ +A K M +
Sbjct: 312 DGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMV 371
Query: 663 PNAQTFHSMVTGYAAIGGKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFA 722
P T+ S++ G G+ V +L EM+ + L+D + + G
Sbjct: 372 PGIVTYSSLIDGLCK-SGRIPYVWDLIDEMRDRGQPADVITYSSLIDGL----CKNGHLD 426
Query: 723 RANEVVAMMEEGKMFIDKYKYRTLF 747
RA + M++ ++ + + + L
Sbjct: 427 RAIALFNKMKDQEIRPNIFTFTILL 451
Score = 45.8 bits (107), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 46/236 (19%), Positives = 92/236 (38%), Gaps = 10/236 (4%)
Query: 447 LQPTEKIYIKLVKAFLEAGKTKELTHFL---IKAEKENLQVSHDDAALGHVITLCISLGW 503
+ P Y LV A + GK KE L +KA + +++ G+ +
Sbjct: 265 INPNVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVY-----E 319
Query: 504 LDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEA 563
+ +A + + M L GV Y L+ + + E L ++ + Y +
Sbjct: 320 VKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSS 379
Query: 564 LLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEG 623
L+ P L EM++ P + + L+ G +N L ++K+
Sbjct: 380 LIDGLCKSGRIPYVWDLIDEMRDRGQP-ADVITYSSLIDGLCKNGHLDRAIALFNKMKD- 437
Query: 624 QRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIG 679
Q I + + ++ CK ++DA++ + + + G+ N T++ M+ G+ G
Sbjct: 438 QEIRPNIFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMINGHCKQG 493
>gi|302758218|ref|XP_002962532.1| hypothetical protein SELMODRAFT_404389 [Selaginella moellendorffii]
gi|300169393|gb|EFJ35995.1| hypothetical protein SELMODRAFT_404389 [Selaginella moellendorffii]
Length = 1031
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 85/183 (46%), Gaps = 15/183 (8%)
Query: 496 TLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQ 555
+LC + +D+A +LD+ + G + SVY L +A+ + R ++ + R+ S
Sbjct: 169 SLC-QMNQIDKAFTMLDKAKVRGFKPEVSVYTILTRAFCKTGRLKDALEIFRNIPSP--- 224
Query: 556 LDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAK 615
DA Y A++ + D GAL KEM E K+ + +L+ G + + ++
Sbjct: 225 -DAIAYNAIIHGHCRKNDCDGALEFLKEMNERKVAPDVFT-YNILIDGLCKASKTDKASE 282
Query: 616 LLQEVKEGQRIDCGVH----DWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSM 671
+L E+ +D GV +N+++ CK + A L M P+ T++++
Sbjct: 283 MLHEM-----VDRGVTPDTVTFNSIMDGLCKAGKFERAHSLLAVMAERNCRPSCCTYNTL 337
Query: 672 VTG 674
++G
Sbjct: 338 ISG 340
Score = 58.5 bits (140), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/199 (22%), Positives = 83/199 (41%), Gaps = 2/199 (1%)
Query: 502 GWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCY 561
G +D+A L+ MH AG Y ++ +A++P+E +L AGI DA Y
Sbjct: 587 GKVDEAFPFLESMHSAGCVPDVVSYNIIIDGLFKASKPKEARQVLDQMIQAGIPPDAVTY 646
Query: 562 EALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVK 621
L+ ++ A+ + K M ++ + + + L+ G +Q + G +L+ E+
Sbjct: 647 NTLMAQFCKEERFDDAVGILKNMIKAGVD-PDNVTYNTLISGLSQTNRLGDAYELMHEML 705
Query: 622 EGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGK 681
+ +N +I CK+ ++ A + M G N T++ + G+
Sbjct: 706 RNGCVVSACTTYNTIIDRLCKEGCLKQALLLMDHMTGHGVEANTVTYNIFIDRLCK-EGR 764
Query: 682 YTEVTELWGEMKSFASSTS 700
E + L EM + S
Sbjct: 765 LDEASSLLSEMDTLRDEVS 783
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 106/556 (19%), Positives = 213/556 (38%), Gaps = 112/556 (20%)
Query: 251 PNTNTFNIALAGCLLFETTRKAEQLLDIMPRIGVKADSNLLIIMAHIYERNGRREELRKL 310
P++ T+++ + KA +LD G K + ++ I+ + + GR ++ ++
Sbjct: 158 PDSYTYHLVIKSLCQMNQIDKAFTMLDKAKVRGFKPEVSVYTILTRAFCKTGRLKDALEI 217
Query: 311 QRHIDEAVNLSDIQFRQFYNCLLSCHLKFGDLNSASKMVLEMLQRAKEARNSLAAAMLPF 370
R+I ++ YN ++ H + D + A + + EM +R +A + +
Sbjct: 218 FRNIPSPDAIA-------YNAIIHGHCRKNDCDGALEFLKEMNER------KVAPDVFTY 264
Query: 371 NAV--GVNNRTPSEQN-------VNCTNSVDLENSGIIENHILSYEDFTKDRKFVALEAE 421
N + G+ + +++ V+ + D I + + F + +A+ AE
Sbjct: 265 NILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGKFERAHSLLAVMAE 324
Query: 422 VKR-----VLQTLLGMLQKQVELITTEHGILQPTEKIYIKLVKAFLEAGKTKELTHFLIK 476
TL+ L KQ + + LV F+ +G ++ + I
Sbjct: 325 RNCRPSCCTYNTLISGLCKQQNVDRAKD------------LVDEFVSSGFVPDVVTYSIL 372
Query: 477 AEKENLQVSHDDAALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEA 536
A+ LC G +D+A +L+ EM G + Y +L+ +A
Sbjct: 373 ADG-----------------LC-KRGRIDEAFELVKEMSGKGCTPNLVTYNTLIDGLCKA 414
Query: 537 NRPREVTALLRDARSAG---------IQLDASCYEA-------LLQSKIVQKDTPGAL-- 578
++ + LL S+G I +D C E +++ + + TP +
Sbjct: 415 SKTEKAYELLESLVSSGFVPDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITY 474
Query: 579 -----------------HLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVK 621
H+FKEM SK + + LV G ++ K Q+V
Sbjct: 475 TALMEGLCRTGRVDEAHHIFKEMV-SKDCTADALAYVSLVNGYCKSSRT----KEAQKVV 529
Query: 622 EGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGK 681
+G R + +N ++ +CK+ + + + M G +PN +T++ ++ G K
Sbjct: 530 DGIRGTPYIDVYNALMDGYCKEGRLDEIPNVFEDMACRGCVPNIKTYNIVMDGLC----K 585
Query: 682 YTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFF-----ARANEVVAMMEEGKM 736
+ +V E + ++S S+ + D V Y + G F A +V+ M + +
Sbjct: 586 HGKVDEAFPFLESMHSAGCVP------DVVSYNIIIDGLFKASKPKEARQVLDQMIQAGI 639
Query: 737 FIDKYKYRTLFLKYHK 752
D Y TL ++ K
Sbjct: 640 PPDAVTYNTLMAQFCK 655
>gi|224083888|ref|XP_002307160.1| predicted protein [Populus trichocarpa]
gi|222856609|gb|EEE94156.1| predicted protein [Populus trichocarpa]
Length = 726
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 83/357 (23%), Positives = 135/357 (37%), Gaps = 46/357 (12%)
Query: 448 QPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQA 507
+P +Y L+ + + +E L + E+ ++ + CI G L +
Sbjct: 356 KPDLLLYNNLIDGLCTSNRLQESCGLLQEMEESGIEPTS-------FTNNCI-FGCLCRR 407
Query: 508 HDLLDEMHL-AGVRASSSV-----YASLLKAYIEANRPREVTALLRDARSAGIQLDASCY 561
HD+ +HL +R V SL+K + + E L D G Q D Y
Sbjct: 408 HDISGALHLLKKMRIHGHVPWIKHSTSLVKELCKHGKEVEACKFLVDMAEEGFQPDIVAY 467
Query: 562 EALLQSKIVQKDTPGALHLFKEM-KESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEV 620
A L I ++ AL LF+++ + P + +L+KG + LL E+
Sbjct: 468 SACLDGLIKIQEVDQALKLFQDICAQGYCPDV--IAYNILIKGLCKTQRIAEAQNLLHEM 525
Query: 621 KEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGG 680
+E + V +N +I CK +++A L M PN T+ +++ G G
Sbjct: 526 EEKGLVPSAV-TYNTLIDGLCKTDHLEEAMLFLSMMIEKEREPNVITYSTLINGLCN-AG 583
Query: 681 KYTEVTELWGEMKSFASSTSMNFDEELLDSVLY-TFVRG-GFFARANEVVAM---MEEGK 735
+ + LW EM + S S+ Y F+ G R NE + MEE +
Sbjct: 584 RPDDALVLWNEMGRKGCTPS---------SIAYMAFIHGLSNCGRPNEALVYLREMEERE 634
Query: 736 MFIDKYKYRTL-------------FLKYHKTLYKGKTPKFQTEAQLKKREAALGFKK 779
M D Y Y L F + + KGK P + + R A L F +
Sbjct: 635 MKPDTYVYVGLLNAFLVDSNQPLAFEILQEMVDKGKFPDLHDKNHISVRNAILKFSE 691
Score = 48.5 bits (114), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 45/88 (51%)
Query: 502 GWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCY 561
G +D+A +L++ M VR + + SL+ +++ +R + L + +G D S Y
Sbjct: 149 GKVDKACELIETMEEKNVRLNKKTFCSLIYGFVKESRVDKALHLFDKMKKSGFTPDISLY 208
Query: 562 EALLQSKIVQKDTPGALHLFKEMKESKI 589
+ ++ V KD AL L+ EMK KI
Sbjct: 209 DVIIGGLCVNKDVKKALCLYSEMKGFKI 236
Score = 44.3 bits (103), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 88/404 (21%), Positives = 147/404 (36%), Gaps = 68/404 (16%)
Query: 225 LEIGYLFQDGRVDP--RKKCNAPLIAMKPNTNTFNIALAGCLLFETTRKAEQLLDIMPRI 282
+ IG DG + R K P PN+ TF+I + G + A L M RI
Sbjct: 299 ITIGNCIGDGEIGKLFRGKAMVP-----PNSTTFSIVINGLIKTGDLDLAVGLFRDMARI 353
Query: 283 GVKADSNLLIIMAHIYERNGRREELRKLQRHIDEAVNLSDIQFRQFYN-CLLSCHLKFGD 341
G K D L + + R +E L + ++E S I+ F N C+ C + D
Sbjct: 354 GCKPDLLLYNNLIDGLCTSNRLQESCGLLQEMEE----SGIEPTSFTNNCIFGCLCRRHD 409
Query: 342 LNS-------------------ASKMVLEMLQRAKE----------ARNSLAAAMLPFNA 372
++ ++ +V E+ + KE A ++ ++A
Sbjct: 410 ISGALHLLKKMRIHGHVPWIKHSTSLVKELCKHGKEVEACKFLVDMAEEGFQPDIVAYSA 469
Query: 373 V--GVNNRTPSEQNVNCTNSVDLENSGIIENHILSYEDFTKDRKFVALEAEVKRVLQTLL 430
G+ +Q + D+ G + +++Y K AE + +L +
Sbjct: 470 CLDGLIKIQEVDQALKLFQ--DICAQGYCPD-VIAYNILIKGLCKTQRIAEAQNLLHEM- 525
Query: 431 GMLQKQVELITTEHGILQPTEKIYIKLVKAFLEAGKTKELTHFL---IKAEKENLQVSHD 487
E L P+ Y L+ + +E FL I+ E+E +++
Sbjct: 526 ------------EEKGLVPSAVTYNTLIDGLCKTDHLEEAMLFLSMMIEKEREPNVITYS 573
Query: 488 DAALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLR 547
G LC + G D A L +EM G SS Y + + RP E LR
Sbjct: 574 TLING----LC-NAGRPDDALVLWNEMGRKGCTPSSIAYMAFIHGLSNCGRPNEALVYLR 628
Query: 548 DARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEM-KESKIP 590
+ ++ D Y LL + +V + P A + +EM + K P
Sbjct: 629 EMEEREMKPDTYVYVGLLNAFLVDSNQPLAFEILQEMVDKGKFP 672
>gi|296085490|emb|CBI29222.3| unnamed protein product [Vitis vinifera]
Length = 826
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 67/319 (21%), Positives = 129/319 (40%), Gaps = 17/319 (5%)
Query: 433 LQKQVELITTEHGILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALG 492
L+K + T + P ++ + AF + GK ++ EK L VS +
Sbjct: 228 LEKSYWVFETMRQGVSPDVYLFSTAINAFCKGGKVEDAIQLFFDMEK--LGVSPNVVTYN 285
Query: 493 HVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSA 552
++I G LD+A ++M GV A+ Y+ L+ ++ + E ++L++
Sbjct: 286 NLIHGLCKHGNLDEAFRFKEKMVKDGVNATLITYSVLINGLMKLEKFNEANSVLKETLEK 345
Query: 553 GIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKI-PRSGHQEFEMLVKGCAQNHEAG 611
G + Y L+ + AL + +M I P S +++G + +
Sbjct: 346 GFTPNEVVYNTLIDGYCKMGNLGDALRIRGDMVSKGINPNS--VTLNSIIQGFCKIGQME 403
Query: 612 LMAKLLQE-VKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHS 670
+L+E + G I+ G + +IH+ C + A + L+ M PN +
Sbjct: 404 QAECILEEMLSRGFSINPGA--FTTIIHWLCMNSRFESALRFLREMLLRNMRPNDGLLTT 461
Query: 671 MVTGYAAIGGKYTEVTELWGEM--KSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVV 728
+V G GK+++ ELW + K F ++ +++++ + G A ++
Sbjct: 462 LVGGLCK-EGKHSDAVELWFRLLEKGFGANLVTT------NALIHGLCKTGNMQEAVRLL 514
Query: 729 AMMEEGKMFIDKYKYRTLF 747
M E +DK Y TL
Sbjct: 515 KKMLERGFVLDKITYNTLI 533
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 56/268 (20%), Positives = 108/268 (40%), Gaps = 45/268 (16%)
Query: 431 GMLQKQVELITT--EHGILQPTEKI-YIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHD 487
G +Q+ V L+ E G + +KI Y L+ + GK +E F ++ E + D
Sbjct: 505 GNMQEAVRLLKKMLERGFV--LDKITYNTLISGCCKEGKVEE--GFKLRGEMVKQGIEPD 560
Query: 488 DAALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLR 547
+I +G LD+A +L +E + + Y ++ Y +A++ E L
Sbjct: 561 TFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYCKADKIEEGEKLFT 620
Query: 548 DARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQN 607
+ + ++L++ Y L+++ +T A L +M+ IP +
Sbjct: 621 ELLTQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIPPT--------------- 665
Query: 608 HEAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQT 667
++++IH C M+DA+ + MR G LPN
Sbjct: 666 ----------------------TATYSSLIHGMCNIGRMEDAKCLIDEMRKEGLLPNVVC 703
Query: 668 FHSMVTGYAAIGGKYTEVTELWGEMKSF 695
+ +++ GY + G+ +V + EM S+
Sbjct: 704 YTALIGGYCKL-GQMDKVVNVLQEMSSY 730
>gi|293335157|ref|NP_001169529.1| uncharacterized protein LOC100383403 [Zea mays]
gi|224029903|gb|ACN34027.1| unknown [Zea mays]
gi|414887232|tpg|DAA63246.1| TPA: hypothetical protein ZEAMMB73_160132 [Zea mays]
Length = 819
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 97/512 (18%), Positives = 210/512 (41%), Gaps = 62/512 (12%)
Query: 248 AMKPNTNTFNIALAGCLLFETTRKAEQLLDIMPRIGVKAD--SNLLIIMAHIYERNGRRE 305
A+ P+ T+N + C +KA +L M GV D ++ +++ A +NG +
Sbjct: 218 AIPPSRTTYNNVINACGAAGNWKKALELCKKMTENGVGPDLITHNIVLSAF---KNGAQY 274
Query: 306 -------ELRKLQRHIDEAVNLSDIQFRQFYNCLLSCHLKFGDLNSASKMVLEMLQRAKE 358
E+ K + + + N ++ C +K G A +E+ +E
Sbjct: 275 SKAIAYFEIMKSSKVAPDTCTM---------NIVIHCLVKIGLYGEA----IELFNSMRE 321
Query: 359 ARNSLAAAMLPFNAVGVNNRTPSEQNVNCTNSVDLENSGIIENHILSYEDFTKDRKFVAL 418
R + ++ + ++ + + + Q NC D+ + + +I+SY +
Sbjct: 322 RRTTCHPDVVTYTSI-MYSYSVCGQAENCKAVFDIMVAEGVRPNIVSYNALLGAYASHGM 380
Query: 419 EAEVKRVLQTLLGMLQKQVELITTEHGILQPTEKIYIKLVKAFLEAG---KTKELTHFLI 475
E + L + L+P Y L+ A+ + K +E+ + +
Sbjct: 381 HTEALETFKLL-------------KQNGLRPDIVSYTSLLNAYGRSAQPEKAREVFNEMR 427
Query: 476 KAEKENLQVSHDDAALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIE 535
K + +VS++ +I S G L +A LL EM G++ ++LL A
Sbjct: 428 KNACKPNKVSYN-----ALIDAYGSAGMLKEAISLLHEMEQDGIQPDVISISTLLTACGR 482
Query: 536 ANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQ 595
+ ++ +L A+S GIQL+ Y + + S + D AL L+ M+ + +
Sbjct: 483 CKQLTKIDIILAAAKSRGIQLNTVAYNSGIGSYLSLGDYKKALVLYTSMRAGNV-KPDAV 541
Query: 596 EFEMLVKGCAQNHEAGLMAKLLQEVKEGQRIDCGVH----DWNNVIHFFCKKRLMQDAEK 651
+ +L+ G + K +++ +D +H +++VI + K+ + +A
Sbjct: 542 TYNILISGSCKLGRYVESLKFFEDM-----LDLNIHLTKEVYSSVICSYVKQGKLTEAAS 596
Query: 652 ALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEMKSFASSTSMNFDEELLDSV 711
M+ G P+ T+ +++ Y+ G + +L+ EM++ + D + S+
Sbjct: 597 TFNSMKETGCFPDVLTYTTLIKAYSD-DGSWRRAWDLFKEMENNGTQP----DAIVCSSL 651
Query: 712 LYTFVRGGFFARANEVVAMMEEGKMFIDKYKY 743
+ +GG R +++ M++ K+ +++ Y
Sbjct: 652 MEALNKGGQPERVLQLIEFMKQKKIQLNQKAY 683
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 53/236 (22%), Positives = 100/236 (42%), Gaps = 13/236 (5%)
Query: 518 GVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQKDTPGA 577
G+R Y SLL AY + +P + + + R + + Y AL+ + A
Sbjct: 395 GLRPDIVSYTSLLNAYGRSAQPEKAREVFNEMRKNACKPNKVSYNALIDAYGSAGMLKEA 454
Query: 578 LHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRIDCGVHDWNNVI 637
+ L EM++ I + L+ C + + + +L K + I +N+ I
Sbjct: 455 ISLLHEMEQDGI-QPDVISISTLLTACGRCKQLTKIDIILAAAKS-RGIQLNTVAYNSGI 512
Query: 638 HFFCKKRLMQDAEKAL---KRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEMKS 694
+ + D +KAL MR+ P+A T++ +++G +G +Y E + + +M
Sbjct: 513 GSYLS---LGDYKKALVLYTSMRAGNVKPDAVTYNILISGSCKLG-RYVESLKFFEDMLD 568
Query: 695 FASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFIDKYKYRTLFLKY 750
+++ +E+ SV+ ++V+ G A M+E F D Y TL Y
Sbjct: 569 L----NIHLTKEVYSSVICSYVKQGKLTEAASTFNSMKETGCFPDVLTYTTLIKAY 620
Score = 40.4 bits (93), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 56/266 (21%), Positives = 105/266 (39%), Gaps = 10/266 (3%)
Query: 430 LGMLQKQVELITT-EHGILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDD 488
LG +K + L T+ G ++P Y L+ + G+ E F N+ ++ +
Sbjct: 518 LGDYKKALVLYTSMRAGNVKPDAVTYNILISGSCKLGRYVESLKFFEDMLDLNIHLTKE- 576
Query: 489 AALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRD 548
VI + G L +A + M G Y +L+KAY + R L ++
Sbjct: 577 -VYSSVICSYVKQGKLTEAASTFNSMKETGCFPDVLTYTTLIKAYSDDGSWRRAWDLFKE 635
Query: 549 ARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNH 608
+ G Q DA +L+++ L L + MK+ KI + FE ++ C
Sbjct: 636 MENNGTQPDAIVCSSLMEALNKGGQPERVLQLIEFMKQKKIQLNQKAYFE-IISSCTMLR 694
Query: 609 EAGLMAKLLQEVKEG-QRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQT 667
+ +++++ + I G N++++F K + K +M + T
Sbjct: 695 DWKTASQIIEHLDSSLSSISFGT--LNHILNFLGKCGRTESMMKLFYKMVTSCSTVGLST 752
Query: 668 FHSMVTGYAAIGG--KYTEVTELWGE 691
+ ++ +G KY EV + W E
Sbjct: 753 YTILLRNLLIVGKWRKYVEVLQ-WME 777
>gi|302775252|ref|XP_002971043.1| hypothetical protein SELMODRAFT_94769 [Selaginella moellendorffii]
gi|300161025|gb|EFJ27641.1| hypothetical protein SELMODRAFT_94769 [Selaginella moellendorffii]
Length = 457
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/241 (24%), Positives = 106/241 (43%), Gaps = 22/241 (9%)
Query: 449 PTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQ---VSHDDAALGHVITLCISLGWLD 505
P + LV F + G+ + L +Q VS++ G + LC W
Sbjct: 8 PNSVTFNALVNGFSKQGRPGDCERLLETMAARGIQPNVVSYN----GLLEGLCKLERW-H 62
Query: 506 QAHDLLDEMHLAGVRASSSV--YASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEA 563
+A +L+ +M G R++ + Y++LL Y +A + E LL++ S G++ DA
Sbjct: 63 EAEELVRDMISRGGRSTPDLVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDA----- 117
Query: 564 LLQSKIVQKDTPGALHLFKEMKESKIPRSGHQ----EFEMLVKGCAQNHEAGLMAKLLQE 619
L+ +K++ A ++ R+G F L+ GC + + LLQ
Sbjct: 118 LMYTKVMASLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQT 177
Query: 620 VK-EGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAI 678
+ G + D V +N ++ CK +Q+AE+ L+RM++ G P+ + S V G
Sbjct: 178 MAASGVKAD--VVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKS 235
Query: 679 G 679
G
Sbjct: 236 G 236
Score = 53.5 bits (127), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 44/203 (21%), Positives = 84/203 (41%), Gaps = 10/203 (4%)
Query: 494 VITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAG 553
+I+ C L+ A LL M +GV+A Y +L+ +A R +E LL +++G
Sbjct: 158 LISGCCREKNLEMADSLLQTMAASGVKADVVTYNTLMDGLCKAGRLQEAEQLLERMKASG 217
Query: 554 IQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQ----EFEMLVKGCAQNHE 609
D Y + + A + ++M++S H + ++ G ++ +
Sbjct: 218 CAPDVVAYSSFVYGLCKSGKVLNAHQVLEQMRDSD-----HDPNVVTYNTILDGLCKSGK 272
Query: 610 AGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFH 669
++++++ V ++ V+ CK Q+A ++ M G P+ T+
Sbjct: 273 IDTALEMMEQMASSDGCGLNVVGYSTVVDGLCKLGRTQEARSVMEAMARAGCRPDVVTYS 332
Query: 670 SMVTGYAAIGGKYTEVTELWGEM 692
S+V G GK E E EM
Sbjct: 333 SLVNGLCK-AGKIEEAVEAVREM 354
Score = 42.7 bits (99), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 83/189 (43%), Gaps = 9/189 (4%)
Query: 497 LCISLGWLDQAHDLLDEMHLA-GVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQ 555
LC S G +D A +++++M + G + Y++++ + R +E +++ AG +
Sbjct: 267 LCKS-GKIDTALEMMEQMASSDGCGLNVVGYSTVVDGLCKLGRTQEARSVMEAMARAGCR 325
Query: 556 LDASCYEALLQSKIVQKDTPGALHLFKEMK-ESKIPRSGHQEFEMLVKG---CAQNHEAG 611
D Y +L+ A+ +EM E P + + LV G C + EA
Sbjct: 326 PDVVTYSSLVNGLCKAGKIEEAVEAVREMAMEGCKPNA--VTYCSLVHGLCSCGRLAEAE 383
Query: 612 LMAK-LLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHS 670
M + + G V +N +I CK + DA K +RMRS G P+ ++ +
Sbjct: 384 RMVEEMSSGGGGGDHCPPSVSTYNALIGGLCKAGRIDDALKFFQRMRSQGCDPDGVSYST 443
Query: 671 MVTGYAAIG 679
+V G A G
Sbjct: 444 IVEGLARSG 452
>gi|357113916|ref|XP_003558747.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g01110-like [Brachypodium distachyon]
Length = 651
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 66/308 (21%), Positives = 117/308 (37%), Gaps = 13/308 (4%)
Query: 447 LQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQ 506
+ P + + L+ F AG+ +E F E +V+ D + +I L G +D
Sbjct: 260 VAPDVRSFNMLIGGFCRAGELEEALRFY--KEMRGRRVTPDVVSFSCLIGLFTRRGEMDH 317
Query: 507 AHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQ 566
A + L EM G+ +Y ++ + A E + + + G D Y LL
Sbjct: 318 AAEYLREMREFGLMPDGVIYTMVIGGFCRAGLMLEALRVRDEMVAFGCLPDVVTYNTLLN 377
Query: 567 SKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQ--EVKEGQ 624
++ A L EMKE +P F L+ G ++ G + K LQ + Q
Sbjct: 378 GLCKERRLSDAEELLNEMKERGVP-PDLCTFTTLIHGYCRD---GNIEKALQFFDTISDQ 433
Query: 625 RIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTE 684
R+ + +N +I C++ + A + M S PN T+ ++ + G
Sbjct: 434 RLRPDIVTYNTLIDGMCRQGDLGKANELWDDMHSREIFPNHVTYSILIDSHCEKGQVDNA 493
Query: 685 VTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFIDKYKYR 744
L + M ++ S++ + R G ++ + + M K+ D Y
Sbjct: 494 FAFLDEMVNKGIVPNIMTYN-----SIIKGYCRSGNVSKGQQFLPKMRHDKVMPDLITYN 548
Query: 745 TLFLKYHK 752
TL Y K
Sbjct: 549 TLIHGYVK 556
Score = 60.1 bits (144), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 55/246 (22%), Positives = 105/246 (42%), Gaps = 7/246 (2%)
Query: 502 GWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCY 561
G ++ A L+D M G++ Y S+LK + R + + R + G+ D +
Sbjct: 208 GDVEAAMALIDSMVSKGIKPGLVTYNSVLKGLLRNGRWDKAREVFRAMDACGVAPDVRSF 267
Query: 562 EALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVK 621
L+ + AL +KEM+ ++ F L+ + E A+ L+E++
Sbjct: 268 NMLIGGFCRAGELEEALRFYKEMRGRRV-TPDVVSFSCLIGLFTRRGEMDHAAEYLREMR 326
Query: 622 EGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGK 681
E + GV + VI FC+ LM +A + M + G LP+ T+++++ G +
Sbjct: 327 EFGLMPDGVI-YTMVIGGFCRAGLMLEALRVRDEMVAFGCLPDVVTYNTLLNGLCK-ERR 384
Query: 682 YTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFIDKY 741
++ EL EMK D ++++ + R G +A + + + ++ D
Sbjct: 385 LSDAEELLNEMKERGVPP----DLCTFTTLIHGYCRDGNIEKALQFFDTISDQRLRPDIV 440
Query: 742 KYRTLF 747
Y TL
Sbjct: 441 TYNTLI 446
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/248 (21%), Positives = 102/248 (41%), Gaps = 11/248 (4%)
Query: 502 GWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCY 561
G D+A ++ M GV + L+ + A E ++ R + D +
Sbjct: 243 GRWDKAREVFRAMDACGVAPDVRSFNMLIGGFCRAGELEEALRFYKEMRGRRVTPDVVSF 302
Query: 562 EALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVK 621
L+ + + A +EM+E + G + M++ G + AGLM + L+
Sbjct: 303 SCLIGLFTRRGEMDHAAEYLREMREFGLMPDG-VIYTMVIGGFCR---AGLMLEALRVRD 358
Query: 622 EGQRIDC--GVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIG 679
E C V +N +++ CK+R + DAE+ L M+ G P+ TF +++ GY
Sbjct: 359 EMVAFGCLPDVVTYNTLLNGLCKERRLSDAEELLNEMKERGVPPDLCTFTTLIHGYCR-D 417
Query: 680 GKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFID 739
G + + + + S + D ++++ R G +ANE+ M ++F +
Sbjct: 418 GNIEKALQFFDTI----SDQRLRPDIVTYNTLIDGMCRQGDLGKANELWDDMHSREIFPN 473
Query: 740 KYKYRTLF 747
Y L
Sbjct: 474 HVTYSILI 481
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 83/443 (18%), Positives = 167/443 (37%), Gaps = 49/443 (11%)
Query: 248 AMKPNTNTFNIALAGCLLFETTRKAEQLLDIMPRIGVKADSNLLIIMAHIYERNGRREEL 307
+KP T+N L G L KA ++ M GV D ++ + R G EE
Sbjct: 224 GIKPGLVTYNSVLKGLLRNGRWDKAREVFRAMDACGVAPDVRSFNMLIGGFCRAGELEEA 283
Query: 308 RKLQRHIDEAVNLSDIQFRQFYNCLLSCHLKFGDLNSASKMVLEMLQRA--------KEA 359
+ + + D+ ++CL+ + G+++ A++ + EM +
Sbjct: 284 LRFYKEMRGRRVTPDVVS---FSCLIGLFTRRGEMDHAAEYLREMREFGLMPDGVIYTMV 340
Query: 360 RNSLAAAMLPFNAVGVNNRTPSEQNVNCTNSVDLENSGIIENHILSYEDFTKDRKFVALE 419
A L A+ V + + C V + N +L+ K+R+
Sbjct: 341 IGGFCRAGLMLEALRVRDEMVA---FGCLPDV------VTYNTLLN--GLCKERRL---- 385
Query: 420 AEVKRVLQTLLGMLQKQVELITTEHGILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEK 479
++ + +L + E G+ P + L+ + G ++ F
Sbjct: 386 SDAEELLNEM------------KERGV-PPDLCTFTTLIHGYCRDGNIEKALQFFDTISD 432
Query: 480 ENLQVSHDDAALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRP 539
+ L+ D +I G L +A++L D+MH + + Y+ L+ ++ E +
Sbjct: 433 QRLR--PDIVTYNTLIDGMCRQGDLGKANELWDDMHSREIFPNHVTYSILIDSHCEKGQV 490
Query: 540 REVTALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEM 599
A L + + GI + Y ++++ + +M+ K+ +
Sbjct: 491 DNAFAFLDEMVNKGIVPNIMTYNSIIKGYCRSGNVSKGQQFLPKMRHDKV-MPDLITYNT 549
Query: 600 LVKGCAQN---HEAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRM 656
L+ G + HEA + K++ E + + +N +I F MQ+A+ K+M
Sbjct: 550 LIHGYVKEGKMHEAFNLLKIM----ENENVQPDAVTYNMIISGFSVHGNMQEADWVYKKM 605
Query: 657 RSLGHLPNAQTFHSMVTGYAAIG 679
+ G P+ T+ SM+ G+ G
Sbjct: 606 GARGIEPDRYTYMSMINGHVVAG 628
Score = 48.5 bits (114), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 72/309 (23%), Positives = 123/309 (39%), Gaps = 29/309 (9%)
Query: 251 PNTNTFNIALAGCLLFETTRKAEQLLDIMPRIGVKADSNLLIIMAHIYERNGRREELRKL 310
P+ T+N L G AE+LL+ M GV D + H Y R+G E+ +
Sbjct: 367 PDVVTYNTLLNGLCKERRLSDAEELLNEMKERGVPPDLCTFTTLIHGYCRDGNIEKALQF 426
Query: 311 QRHIDEAVNLSDIQFRQFYNCLLSCHLKFGDLNSASKMVLEMLQRAKEARNSLAAAMLPF 370
I + DI YN L+ + GDL A+++ +M R + N + ++L
Sbjct: 427 FDTISDQRLRPDI---VTYNTLIDGMCRQGDLGKANELWDDMHSR-EIFPNHVTYSIL-- 480
Query: 371 NAVGVNNRTPSEQNVNCTNSVD-LENSGIIENHILSYEDFTKDRKFVALEAEVKRVLQTL 429
+++ Q N +D + N GI+ N I++Y K V + Q L
Sbjct: 481 ----IDSHCEKGQVDNAFAFLDEMVNKGIVPN-IMTYNSIIKG---YCRSGNVSKGQQFL 532
Query: 430 LGMLQKQVELITTEHGILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDA 489
M H + P Y L+ +++ GK E + L E EN+Q DA
Sbjct: 533 PKM----------RHDKVMPDLITYNTLIHGYVKEGKMHEAFNLLKIMENENVQ---PDA 579
Query: 490 ALGHVITLCISL-GWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRD 548
++I S+ G + +A + +M G+ Y S++ ++ A ++ L +
Sbjct: 580 VTYNMIISGFSVHGNMQEADWVYKKMGARGIEPDRYTYMSMINGHVVAGNSKKSFQLHDE 639
Query: 549 ARSAGIQLD 557
G+ D
Sbjct: 640 MLQKGLAPD 648
>gi|5738362|emb|CAB52870.1| putative protein [Arabidopsis thaliana]
gi|7268785|emb|CAB78991.1| putative protein [Arabidopsis thaliana]
Length = 1302
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 70/306 (22%), Positives = 132/306 (43%), Gaps = 20/306 (6%)
Query: 444 HGILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGW 503
+G LQ ++ +++ F E G+ E ++ + + L S + V+ + + LG
Sbjct: 741 NGNLQKAHEVMRCMLRNFSEIGRLNEAVGMVMDMQNQGLTPSS--ITMNCVLEIAVELGL 798
Query: 504 LDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAG-IQLDASC-- 560
++ A ++ DEM + GV SS Y ++ + +E L G I +A+C
Sbjct: 799 IEYAENVFDEMSVRGVVPDSSSYKLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTL 858
Query: 561 -YEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQE 619
AL ++ +V + A+ F++M + + F L+ G + ++L+E
Sbjct: 859 ILTALCENGLVNR----AIWYFRKMIDLGF-KPNLINFTSLIDGLCKKGSIKQAFEMLEE 913
Query: 620 -VKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKA-LKRMRSLGHLPNAQTFHSMVTGYAA 677
V+ G + + H +I CK+ + A + LK +RS + PN T+ SM+ GY
Sbjct: 914 MVRNGWKPNVYTH--TALIDGLCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCK 971
Query: 678 IGGKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMF 737
K L+ MK ++N L++ + G F RA E++ +M +
Sbjct: 972 -EDKLNRAEMLFSRMKEQGLFPNVNTYTTLING----HCKAGSFGRAYELMNLMGDEGFM 1026
Query: 738 IDKYKY 743
+ Y Y
Sbjct: 1027 PNIYTY 1032
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/178 (23%), Positives = 76/178 (42%), Gaps = 37/178 (20%)
Query: 502 GWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCY 561
G +A++L++ M G + Y + + + + +R E LL A S G++ D Y
Sbjct: 1008 GSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEADGVTY 1067
Query: 562 EALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVK 621
L+Q + Q D AL F M ++ G A +
Sbjct: 1068 TILIQEQCKQNDINQALAFFCRM-----------------------NKTGFEADM----- 1099
Query: 622 EGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIG 679
R++ N +I FC+++ M+++E+ + + SLG +P +T+ SM++ Y G
Sbjct: 1100 ---RLN------NILIAAFCRQKKMKESERLFQLVVSLGLIPTKETYTSMISCYCKEG 1148
>gi|19071826|dbj|BAB85657.1| PnC401 homologue [Arabidopsis thaliana]
Length = 831
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 69/312 (22%), Positives = 129/312 (41%), Gaps = 21/312 (6%)
Query: 448 QPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQA 507
+P+ Y LV A L + K EK L+ D +I G LDQA
Sbjct: 351 KPSLITYTTLVTALTRQKHFHSLLSLISKVEKNGLK--PDTILFNAIINASSESGNLDQA 408
Query: 508 HDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDA-RSAGIQLDASCYEALLQ 566
+ ++M +G + ++S + +L+K Y + + E + LL R +Q + L+Q
Sbjct: 409 MKIFEKMKESGCKPTASTFNTLIKGYGKIGKLEESSRLLDMMLRDEMLQPNDRTCNILVQ 468
Query: 567 SKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVK-----GCAQNHEAGLMAKLL-QEV 620
+ Q+ A ++ +M+ + + F L K G E ++ ++L +V
Sbjct: 469 AWCNQRKIEEAWNIVYKMQSYGV-KPDVVTFNTLAKAYARIGSTCTAEDMIIPRMLHNKV 527
Query: 621 KEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGG 680
K R CG +++ +C++ M++A + RM+ LG PN F+S++ G+ I
Sbjct: 528 KPNVRT-CGT-----IVNGYCEEGKMEEALRFFYRMKELGVHPNLFVFNSLIKGFLNIND 581
Query: 681 KYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFIDK 740
+ GE+ + D +++ + G R E+ M EG + D
Sbjct: 582 -----MDGVGEVVDLMEEFGVKPDVVTFSTLMNAWSSVGDMKRCEEIYTDMLEGGIDPDI 636
Query: 741 YKYRTLFLKYHK 752
+ + L Y +
Sbjct: 637 HAFSILAKGYAR 648
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/185 (21%), Positives = 84/185 (45%), Gaps = 1/185 (0%)
Query: 499 ISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDA 558
I G +AH + + + G + S Y +L+ A + +L+ G++ D
Sbjct: 330 IERGRPQEAHSIFNTLIEEGHKPSLITYTTLVTALTRQKHFHSLLSLISKVEKNGLKPDT 389
Query: 559 SCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQ 618
+ A++ + + A+ +F++MKES + F L+KG + + ++LL
Sbjct: 390 ILFNAIINASSESGNLDQAMKIFEKMKESGC-KPTASTFNTLIKGYGKIGKLEESSRLLD 448
Query: 619 EVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAI 678
+ + + N ++ +C +R +++A + +M+S G P+ TF+++ YA I
Sbjct: 449 MMLRDEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAKAYARI 508
Query: 679 GGKYT 683
G T
Sbjct: 509 GSTCT 513
>gi|42570531|ref|NP_850859.2| SNF1-like protein kinase [Arabidopsis thaliana]
gi|75160582|sp|Q8S9D1.1|PP395_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g21222; AltName: Full=SNF1-like protein kinase AtC401
gi|19071860|dbj|BAB85674.1| SNF1-like protein kinase [Arabidopsis thaliana]
gi|332005563|gb|AED92946.1| SNF1-like protein kinase [Arabidopsis thaliana]
Length = 831
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 69/312 (22%), Positives = 129/312 (41%), Gaps = 21/312 (6%)
Query: 448 QPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQA 507
+P+ Y LV A L + K EK L+ D +I G LDQA
Sbjct: 351 KPSLITYTTLVTALTRQKHFHSLLSLISKVEKNGLK--PDTILFNAIINASSESGNLDQA 408
Query: 508 HDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDA-RSAGIQLDASCYEALLQ 566
+ ++M +G + ++S + +L+K Y + + E + LL R +Q + L+Q
Sbjct: 409 MKIFEKMKESGCKPTASTFNTLIKGYGKIGKLEESSRLLDMMLRDEMLQPNDRTCNILVQ 468
Query: 567 SKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVK-----GCAQNHEAGLMAKLL-QEV 620
+ Q+ A ++ +M+ + + F L K G E ++ ++L +V
Sbjct: 469 AWCNQRKIEEAWNIVYKMQSYGV-KPDVVTFNTLAKAYARIGSTCTAEDMIIPRMLHNKV 527
Query: 621 KEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGG 680
K R CG +++ +C++ M++A + RM+ LG PN F+S++ G+ I
Sbjct: 528 KPNVRT-CGT-----IVNGYCEEGKMEEALRFFYRMKELGVHPNLFVFNSLIKGFLNIND 581
Query: 681 KYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFIDK 740
+ GE+ + D +++ + G R E+ M EG + D
Sbjct: 582 -----MDGVGEVVDLMEEFGVKPDVVTFSTLMNAWSSVGDMKRCEEIYTDMLEGGIDPDI 636
Query: 741 YKYRTLFLKYHK 752
+ + L Y +
Sbjct: 637 HAFSILAKGYAR 648
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/185 (21%), Positives = 84/185 (45%), Gaps = 1/185 (0%)
Query: 499 ISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDA 558
I G +AH + + + G + S Y +L+ A + +L+ G++ D
Sbjct: 330 IERGRPQEAHSIFNTLIEEGHKPSLITYTTLVTALTRQKHFHSLLSLISKVEKNGLKPDT 389
Query: 559 SCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQ 618
+ A++ + + A+ +F++MKES + F L+KG + + ++LL
Sbjct: 390 ILFNAIINASSESGNLDQAMKIFEKMKESGC-KPTASTFNTLIKGYGKIGKLEESSRLLD 448
Query: 619 EVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAI 678
+ + + N ++ +C +R +++A + +M+S G P+ TF+++ YA I
Sbjct: 449 MMLRDEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAKAYARI 508
Query: 679 GGKYT 683
G T
Sbjct: 509 GSTCT 513
Score = 40.4 bits (93), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 42/235 (17%), Positives = 96/235 (40%), Gaps = 5/235 (2%)
Query: 446 ILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLD 505
+LQP ++ LV+A+ K +E + + K + + V D + +G
Sbjct: 455 MLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQ--SYGVKPDVVTFNTLAKAYARIGSTC 512
Query: 506 QAHDLL-DEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEAL 564
A D++ M V+ + +++ Y E + E + G+ + + +L
Sbjct: 513 TAEDMIIPRMLHNKVKPNVRTCGTIVNGYCEEGKMEEALRFFYRMKELGVHPNLFVFNSL 572
Query: 565 LQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQ 624
++ + D G + M+E + + F L+ + + ++ ++ EG
Sbjct: 573 IKGFLNINDMDGVGEVVDLMEEFGV-KPDVVTFSTLMNAWSSVGDMKRCEEIYTDMLEGG 631
Query: 625 RIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIG 679
ID +H ++ + + + + AE+ L +MR G PN + +++G+ + G
Sbjct: 632 -IDPDIHAFSILAKGYARAGEPEKAEQILNQMRKFGVRPNVVIYTQIISGWCSAG 685
>gi|115471383|ref|NP_001059290.1| Os07g0249100 [Oryza sativa Japonica Group]
gi|33146978|dbj|BAC80051.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|50508482|dbj|BAD30659.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113610826|dbj|BAF21204.1| Os07g0249100 [Oryza sativa Japonica Group]
gi|215767773|dbj|BAH00002.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 882
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/223 (21%), Positives = 107/223 (47%), Gaps = 4/223 (1%)
Query: 452 KIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQAHDLL 511
+ Y +V F ++GK + L + +++ +Q + A G ++ + LD+A+ L
Sbjct: 599 RAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTV--ATYGAIVDGLAKIDRLDEAYMLF 656
Query: 512 DEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQ 571
+E G+ + +Y+SL+ + + R E +L + G+ + + +LL + +
Sbjct: 657 EEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLLDALVKA 716
Query: 572 KDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRIDCGVH 631
++ AL F+ MKE K P + + + +L+ G + + Q++++ Q + V
Sbjct: 717 EEINEALVCFQSMKEMKCPPNTYT-YSILINGLCRVQKYNKAFVFWQDMQK-QGLVPNVV 774
Query: 632 DWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTG 674
+ +I K + DA +R ++ G +P+A +F++++ G
Sbjct: 775 TYTTMISGLAKVGNITDAYSLFERFKANGGIPDAASFNALIEG 817
Score = 48.9 bits (115), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 42/190 (22%), Positives = 78/190 (41%), Gaps = 2/190 (1%)
Query: 490 ALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDA 549
A H+ + LD A + M R + S Y L+ A EA RP LLR
Sbjct: 146 ACAHLAAALVRARRLDDAVLAVAVMRRLKFRPAFSAYTVLIGALAEARRPERALELLRQM 205
Query: 550 RSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHE 609
+ G ++ + L+++ + AL L E+K S + + + + +
Sbjct: 206 QEVGYEVGVHLFTTLVRALAREGQVADALALVDEVKGSCL-EPDIVLYNVCIDCFGKAGN 264
Query: 610 AGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFH 669
+ K E+K Q + + ++I CK + +AE+ +M + +P A ++
Sbjct: 265 VDMAWKFFHELK-AQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYN 323
Query: 670 SMVTGYAAIG 679
+M+ GY + G
Sbjct: 324 TMIMGYGSAG 333
Score = 48.5 bits (114), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 51/235 (21%), Positives = 101/235 (42%), Gaps = 16/235 (6%)
Query: 502 GWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCY 561
G +D+A+ L ++M AG A+ VY SL++ + R + + ++ G + D +
Sbjct: 472 GQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGHKIFKELIRRGCKPDLTLL 531
Query: 562 EALLQSKIVQKDTPGALHLFKEMKESK-IPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEV 620
+ + +F++++ +P + + +L+ G + +A + + +
Sbjct: 532 NTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDV--RSYSILIHGLTKAGQARETSNIFHAM 589
Query: 621 KEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGG 680
K+ Q +N V+ FCK + A + L+ M+ P T+ ++V G A I
Sbjct: 590 KQ-QGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIVDGLAKI-D 647
Query: 681 KYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGF--FARANEVVAMMEE 733
+ E L+ E KS L+ VLY+ + GF R +E ++EE
Sbjct: 648 RLDEAYMLFEEAKSKGIE---------LNVVLYSSLIDGFGKVGRIDEAYLILEE 693
Score = 47.8 bits (112), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 58/262 (22%), Positives = 106/262 (40%), Gaps = 14/262 (5%)
Query: 431 GMLQKQVELITTEHG-ILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDA 489
G + + L+ G L+P +Y + F +AG F + + + L+ DD
Sbjct: 228 GQVADALALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMAWKFFHELKAQGLK--PDDV 285
Query: 490 ALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDA 549
+ +I + G L +A +L +M + Y +++ Y A R + LL
Sbjct: 286 SYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIMGYGSAGRFEDAYKLLERL 345
Query: 550 RSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQE--FEMLVKGCAQN 607
R G + ++L ++ AL LF+ MK+ P S +ML G +
Sbjct: 346 RERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVMKKDAEPNSSTYNIIIDMLCLG-GRV 404
Query: 608 HEAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQT 667
EA ++L E++ + N ++ CK R +++A K + G P+ T
Sbjct: 405 EEA---YRILDEMEHASLFP-NLLTVNIMVDRLCKARKLEEAYKIFESASQRGCNPDCVT 460
Query: 668 FHSMVTGYAAIGGKYTEVTELW 689
+ S++ G GK +V E +
Sbjct: 461 YCSLIDGL----GKKGQVDEAY 478
Score = 44.7 bits (104), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 49/220 (22%), Positives = 91/220 (41%), Gaps = 4/220 (1%)
Query: 453 IYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQAHDLLD 512
+Y L++ F G+ KE H + K E D L + G +++ + +
Sbjct: 495 VYTSLIRNFFIHGR-KEDGHKIFK-ELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFE 552
Query: 513 EMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQK 572
++ G Y+ L+ +A + RE + + + G LDA Y A++
Sbjct: 553 DIRSYGFLPDVRSYSILIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSG 612
Query: 573 DTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRIDCGVHD 632
A + +EMKE K + + +V G A+ L +E K + I+ V
Sbjct: 613 KVHKAYEILEEMKE-KCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAK-SKGIELNVVL 670
Query: 633 WNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMV 672
++++I F K + +A L+ M G PN T++S++
Sbjct: 671 YSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLL 710
>gi|359479583|ref|XP_002275680.2| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Vitis vinifera]
gi|297735515|emb|CBI17955.3| unnamed protein product [Vitis vinifera]
Length = 627
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 60/238 (25%), Positives = 94/238 (39%), Gaps = 14/238 (5%)
Query: 447 LQPTEKIYIKLVKAFLEAGKTKELTHFL---IKAEKENLQVSHDDAALGHVITLCISLGW 503
+ P + L+ A +AGK +E H L I+ + +++ G C+ G
Sbjct: 304 VHPNVVTFNVLIDALCKAGKMEEANHLLKLMIQRGESPDTFTYNTLIDG----FCLE-GR 358
Query: 504 LDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEA 563
+D A DL M G+ + Y L+ Y ++ R E L R+ I Y
Sbjct: 359 IDDARDLFVSMESKGIETDAVSYNVLINGYCKSGRMVEAKKLYREMMCKEIMPTVITYNT 418
Query: 564 LLQSKIVQKDTPGALHLFKEMKESKI-PRSGHQEFEMLVKG-CAQNHEAGLMAKLLQEVK 621
LL + A +LF EMK + P S + +L+ G C NH + M L
Sbjct: 419 LLTGLFREGKVRDAWNLFGEMKVHDLTPES--CTYNILLDGLCKNNHLSEAME--LFHYL 474
Query: 622 EGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIG 679
E + +N +I CK R ++ A + R+ G PN T+ M+ G G
Sbjct: 475 ENHDFQPSIQIFNCLIDGLCKARKIEIARELFNRLSHEGLEPNVITYTVMIHGLCKSG 532
Score = 48.5 bits (114), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 67/283 (23%), Positives = 108/283 (38%), Gaps = 23/283 (8%)
Query: 482 LQVSHDDAALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPRE 541
+ ++ D L +I +L +D +L EM G ++ + SL+K +R E
Sbjct: 121 IGLAPDFITLNILINCYCNLNKVDFGLAVLGEMLRRGHSPNTVTFTSLVKGLCLGSRISE 180
Query: 542 VTALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLV 601
T LLR G + + Y LL + +T A+ L +EM +G+ F + +
Sbjct: 181 ATGLLRKMVRMGYRPNVVTYGTLLNGLCMTGNTMLAVKLHEEM------LNGNGGFGVTI 234
Query: 602 KGCAQNH--------EAGLMAK---LLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAE 650
K + + GL+ K L E+K G+ I V ++++IH C + A+
Sbjct: 235 KPNLVCYCTIIDSLCKDGLIDKGKELFLEMK-GRGISPDVVAYSSIIHGMCHTGRWEGAK 293
Query: 651 KALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEMKSFASSTSMNFDEELLDS 710
M G PN TF+ ++ GK E L M S L+D
Sbjct: 294 GLFNEMVDEGVHPNVVTFNVLIDALCK-AGKMEEANHLLKLMIQRGESPDTFTYNTLIDG 352
Query: 711 VLYTFVRGGFFARANEVVAMMEEGKMFIDKYKYRTLFLKYHKT 753
F G A ++ ME + D Y L Y K+
Sbjct: 353 ----FCLEGRIDDARDLFVSMESKGIETDAVSYNVLINGYCKS 391
>gi|297805766|ref|XP_002870767.1| EMB2745 [Arabidopsis lyrata subsp. lyrata]
gi|297316603|gb|EFH47026.1| EMB2745 [Arabidopsis lyrata subsp. lyrata]
Length = 747
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 96/459 (20%), Positives = 192/459 (41%), Gaps = 47/459 (10%)
Query: 251 PNTNTFNIALAGCLLFETTRKAEQLLDIMPRIGVKADSNLLIIMAHIYERNGRREELRKL 310
PN T+N + G +LL M G++ + ++ + R GR +E+ +
Sbjct: 238 PNVVTYNTLIDGYCKLRKIDDGFELLRSMALKGLEPNLISYNVVINGLCREGRMKEISFV 297
Query: 311 QRHIDE-AVNLSDIQFRQFYNCLLSCHLKFGDLNSASKMVLEMLQRAKEARNSLAAAMLP 369
+++ +L ++ YN L+ + K G+ + A M EML R+ L+ +++
Sbjct: 298 LTEMNKRGYSLDEVT----YNTLIKGYCKEGNFHQALVMHAEML------RHGLSPSVIT 347
Query: 370 FNAVGVNNRTPSEQNVNCTNSVD-LENSGIIENHILSYEDFTKDRKFVALEAEVKRVLQT 428
+ ++ +++ + T +D + G+ N +Y E RVL+
Sbjct: 348 YTSL-IHSMCKAGNMNRATEFLDQMRVRGLCPNE-RTYTTLVDGFSQKGYMNEAYRVLKE 405
Query: 429 LLGMLQKQVELITTEHGILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDD 488
++ ++G P+ Y L+ AGK + L +++ L + D
Sbjct: 406 MI------------DNG-FSPSVVTYNALINGHCIAGKMVDAIAVLEDMKEKGL--TPDV 450
Query: 489 AALGHVIT-LCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLR 547
+ V++ C S +D+A + +M G++ + Y+SL++ + E R +E L
Sbjct: 451 VSYSTVLSGFCRSYD-VDEALRVKRKMVAKGIKPDTITYSSLIQGFCEQRRTKEACDLFD 509
Query: 548 DARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGC--- 604
+ G+ D Y AL+ + ++ D A+ L EM E + + +L+ G
Sbjct: 510 EMLRVGLPPDEFTYTALINAYCMEGDLQKAIQLHNEMVEKGV-LPDVVTYSVLINGLNKQ 568
Query: 605 AQNHEAG-LMAKLLQEVKEGQRI-------DCGVHDWNNVIHF---FCKKRLMQDAEKAL 653
A+ EA L+ KL E + +C ++ +V+ FC K +M +A++
Sbjct: 569 ARTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVF 628
Query: 654 KRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEM 692
+ M H P+ ++ M+ G+ GG + L+ EM
Sbjct: 629 ESMLEKNHKPDGTAYNVMIHGHCR-GGDIRKAYSLYKEM 666
Score = 45.4 bits (106), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 44/187 (23%), Positives = 80/187 (42%), Gaps = 11/187 (5%)
Query: 497 LCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQL 556
C++ G LD A D M G + Y +L+ Y + + + LLR G++
Sbjct: 215 FCLA-GNLDVALRFFDRMEKKGCLPNVVTYNTLIDGYCKLRKIDDGFELLRSMALKGLEP 273
Query: 557 DASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKG-CAQN--HEAGLM 613
+ Y ++ + + EM + + L+KG C + H+A +M
Sbjct: 274 NLISYNVVINGLCREGRMKEISFVLTEMNKRGYSLD-EVTYNTLIKGYCKEGNFHQALVM 332
Query: 614 -AKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMV 672
A++L+ + V + ++IH CK M A + L +MR G PN +T+ ++V
Sbjct: 333 HAEMLR-----HGLSPSVITYTSLIHSMCKAGNMNRATEFLDQMRVRGLCPNERTYTTLV 387
Query: 673 TGYAAIG 679
G++ G
Sbjct: 388 DGFSQKG 394
>gi|357125910|ref|XP_003564632.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g09060-like isoform 1 [Brachypodium distachyon]
gi|357125912|ref|XP_003564633.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g09060-like isoform 2 [Brachypodium distachyon]
Length = 704
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 58/284 (20%), Positives = 118/284 (41%), Gaps = 21/284 (7%)
Query: 496 TLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQ 555
+LC+ G LD+A L D + G+ Y++L+ +++ NR LL + S +Q
Sbjct: 168 SLCVR-GDLDRAVTLFDSLRCRGLAPDRITYSTLMSGFVKNNRLDNALYLLDEMPSYEVQ 226
Query: 556 LDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQ---NHEAG- 611
DA CY ALL + A+ +++++ + +++ G + EAG
Sbjct: 227 PDAVCYNALLGGCFRNGEFEKAMRVWEQLVRDPGASPNLATYNVMLDGLCKLGMFKEAGD 286
Query: 612 LMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSM 671
+ +++ + I G +IH C+ + A + M G +P+ ++S+
Sbjct: 287 VWERMVANNHQPDMITYGT-----MIHGLCRSTDVDSAARVYSEMIKTGLVPDVVIYNSL 341
Query: 672 VTGYAAIGGKYTEVTELWGEM--KSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVA 729
+ G+ G+ E + W M + TS N +L GG +A ++
Sbjct: 342 LKGFCH-AGRVGEAWKFWDSMSVSGIRNVTSYNI-------MLKGLFDGGMVDKATDLWE 393
Query: 730 MME-EGKMFIDKYKYRTLFLKYHKTLYKGKTPKFQTEAQLKKRE 772
++E + + D + T+ + + K+ + EA+ +E
Sbjct: 394 LLEKDDSLSPDMVTFSTMIHGLCEKGFANKSLQILEEARTSGKE 437
Score = 48.9 bits (115), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 62/313 (19%), Positives = 127/313 (40%), Gaps = 20/313 (6%)
Query: 447 LQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITL--CISLGWL 504
L P IY L+K F AG+ E F +++ VS + I L G +
Sbjct: 331 LVPDVVIYNSLLKGFCHAGRVGEAWKFW-----DSMSVSGIRNVTSYNIMLKGLFDGGMV 385
Query: 505 DQAHDLLDEMHLAGVRASSSV-YASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEA 563
D+A DL + + + V +++++ E + +L +AR++G +LD Y +
Sbjct: 386 DKATDLWELLEKDDSLSPDMVTFSTMIHGLCEKGFANKSLQILEEARTSGKELDEFSYSS 445
Query: 564 LLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEG 623
++ A+ L++++ + H + L+ G Q + ++ ++ E
Sbjct: 446 MISGLCKDGRLDDAVKLYEKISMDSFKPNSHI-YNALINGFCQASKFSDAIRVYSQMAEN 504
Query: 624 QRIDCG--VHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGK 681
DC +N +IH CK +A + + M G + + T+ S++ G K
Sbjct: 505 ---DCSPTTITYNTLIHGLCKAEKYLEASRFTREMLEKGCMLDVNTYGSLIRGLCR-DKK 560
Query: 682 YTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVA-MMEEGKMFIDK 740
LW ++ T D + + +++ G A+++++ M E+ +
Sbjct: 561 IDGALALWNQILDKGLQT----DVVMHNILIHGLCSAGKVDEASQLLSEMKEKNNCCPNV 616
Query: 741 YKYRTLFLKYHKT 753
Y TL +++T
Sbjct: 617 VTYNTLMDGFYET 629
>gi|326505926|dbj|BAJ91202.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 669
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 62/285 (21%), Positives = 108/285 (37%), Gaps = 47/285 (16%)
Query: 449 PTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQAH 508
P + KL++ G+T + L AE V D A ++ G LD A
Sbjct: 72 PDVYLCTKLIRNLCRRGRTSDAARVLRTAEASGAPV--DVFAYNTLVAGYCRYGRLDAAR 129
Query: 509 DLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSK 568
L+ M V + Y +++ + R + ALL D G Q Y LL++
Sbjct: 130 RLIASMP---VPPDAYTYTPIIRGLCDRGRVGDALALLDDMLQRGCQPSVVTYTVLLEAV 186
Query: 569 IVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRIDC 628
A+++ EM+ KGC N
Sbjct: 187 CKSSGFGEAMNVLDEMR---------------AKGCTPN--------------------- 210
Query: 629 GVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTEL 688
+ +N +I+ C++ + DA++ L R+ S G P+ ++ +++ G A ++ +V L
Sbjct: 211 -IVTYNVIINGMCREGRVDDAKEILNRLSSYGFQPDIVSYTTVLKGLCA-ARRWDDVKVL 268
Query: 689 WGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEE 733
+ EM +E D ++ F RGG RA +V+ M +
Sbjct: 269 FAEMVDKKCVP----NEVTFDMLVRFFCRGGMVERAIQVLQQMSQ 309
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 55/263 (20%), Positives = 96/263 (36%), Gaps = 46/263 (17%)
Query: 449 PTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQAH 508
P E + LV+ F G + L + + + + VI G +D A+
Sbjct: 279 PNEVTFDMLVRFFCRGGMVERAIQVLQQMSQHG--CTPNTTLCNIVINAICKQGRVDDAY 336
Query: 509 DLLDEMHLAGVRASSSVYASLLKAYIEANR-----------------PREVT-------- 543
D L+ M + G + Y ++L+ A R P EVT
Sbjct: 337 DFLNNMGMYGCNPDTISYTTVLRGLCRAGRWEHAKELLPEMVRKNCPPNEVTFNTFICIL 396
Query: 544 ----------ALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSG 593
L+ G + Y AL+ VQ AL LF + +
Sbjct: 397 CQKGLIEQAIKLIELMPEYGCSVGIVTYNALVHGFCVQGRVDSALELFNNLPCEPNTITY 456
Query: 594 HQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRIDCGVH--DWNNVIHFFCKKRLMQDAEK 651
L + A L+A ++Q+ DC ++ +N ++ FFC+K +++A +
Sbjct: 457 TTLLTGLCHAERLDAAAELLAGMIQK-------DCPLNAVTFNVLVSFFCQKGFVEEAME 509
Query: 652 ALKRMRSLGHLPNAQTFHSMVTG 674
+ +M G PN TF++++ G
Sbjct: 510 LVNQMMEHGCTPNLITFNTLLDG 532
>gi|449446121|ref|XP_004140820.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g09680-like [Cucumis sativus]
Length = 590
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/196 (23%), Positives = 93/196 (47%), Gaps = 6/196 (3%)
Query: 497 LCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQL 556
LC +G +++A L+DEM + G++ Y +L+ Y + + + G+ L
Sbjct: 373 LC-KVGDVNKARKLVDEMRMVGMKPDKITYTTLIDGYCKEGDLESAMEIRKGMNEEGVVL 431
Query: 557 DASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKL 616
D + AL+ A +EM E+ + + + M++ G + + KL
Sbjct: 432 DNVAFTALISGFCRDGRVRDAERTLREMVEAGM-KPDDATYTMVIDGYCKKGNVKMGFKL 490
Query: 617 LQEVK-EGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGY 675
L+E++ G + GV +N +++ CK+ M++A L+ M +LG P+ T++ ++ G+
Sbjct: 491 LKEMQINGHKP--GVITYNVLMNGLCKQGQMKNANMLLEAMLNLGVTPDDITYNILLEGH 548
Query: 676 AAIGGKYTEVTELWGE 691
GK ++ +L E
Sbjct: 549 CK-NGKAEDLLKLRNE 563
Score = 56.2 bits (134), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 54/236 (22%), Positives = 95/236 (40%), Gaps = 10/236 (4%)
Query: 447 LQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQ 506
L+PT + L+ ++ E F +K E ++ D +I G LD
Sbjct: 254 LRPTTVSFNTLINGLCKSRNLDE--GFRLKKTMEENRIYPDVFTYSVLIHGLCKEGRLDV 311
Query: 507 AHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQ 566
A L DEM G+R + + +L+ + R + G++ D Y LL
Sbjct: 312 AEQLFDEMQQRGLRPNGITFTALIDGQCRSRRIDSAMNTYHQMLTMGVKPDLVMYNTLLN 371
Query: 567 SKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRI 626
D A L EM+ + + + L+ G + E L + + E+++G
Sbjct: 372 GLCKVGDVNKARKLVDEMRMVGM-KPDKITYTTLIDGYCK--EGDLESAM--EIRKGMNE 426
Query: 627 DCGVHD---WNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIG 679
+ V D + +I FC+ ++DAE+ L+ M G P+ T+ ++ GY G
Sbjct: 427 EGVVLDNVAFTALISGFCRDGRVRDAERTLREMVEAGMKPDDATYTMVIDGYCKKG 482
>gi|29294052|gb|AAO73889.1| protein kinase family [Arabidopsis thaliana]
Length = 854
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 69/312 (22%), Positives = 129/312 (41%), Gaps = 21/312 (6%)
Query: 448 QPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQA 507
+P+ Y LV A L + K EK L+ D +I G LDQA
Sbjct: 374 KPSLITYTTLVTALTRQKHFHSLLSLISKVEKNGLK--PDTILFNAIINASSESGNLDQA 431
Query: 508 HDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDA-RSAGIQLDASCYEALLQ 566
+ ++M +G + ++S + +L+K Y + + E + LL R +Q + L+Q
Sbjct: 432 MKIFEKMKESGCKPTASTFNTLIKGYGKIGKLEESSRLLDMMLRDEMLQPNDRTCNILVQ 491
Query: 567 SKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVK-----GCAQNHEAGLMAKLL-QEV 620
+ Q+ A ++ +M+ + + F L K G E ++ ++L +V
Sbjct: 492 AWCNQRKIEEAWNIVYKMQSYGV-KPDVVTFNTLAKAYARIGSTCTAEDMIIPRMLHNKV 550
Query: 621 KEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGG 680
K R CG +++ +C++ M++A + RM+ LG PN F+S++ G+ I
Sbjct: 551 KPNVRT-CGT-----IVNGYCEEGKMEEALRFFYRMKELGVHPNLFVFNSLIKGFLNIND 604
Query: 681 KYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFIDK 740
+ GE+ + D +++ + G R E+ M EG + D
Sbjct: 605 -----MDGVGEVVDLMEEFGVKPDVVTFSTLMNAWSSVGDMKRCEEIYTDMLEGGIDPDI 659
Query: 741 YKYRTLFLKYHK 752
+ + L Y +
Sbjct: 660 HAFSILAKGYAR 671
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/185 (21%), Positives = 84/185 (45%), Gaps = 1/185 (0%)
Query: 499 ISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDA 558
I G +AH + + + G + S Y +L+ A + +L+ G++ D
Sbjct: 353 IERGRPQEAHSIFNTLIEEGHKPSLITYTTLVTALTRQKHFHSLLSLISKVEKNGLKPDT 412
Query: 559 SCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQ 618
+ A++ + + A+ +F++MKES + F L+KG + + ++LL
Sbjct: 413 ILFNAIINASSESGNLDQAMKIFEKMKESGC-KPTASTFNTLIKGYGKIGKLEESSRLLD 471
Query: 619 EVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAI 678
+ + + N ++ +C +R +++A + +M+S G P+ TF+++ YA I
Sbjct: 472 MMLRDEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAKAYARI 531
Query: 679 GGKYT 683
G T
Sbjct: 532 GSTCT 536
Score = 40.0 bits (92), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 42/235 (17%), Positives = 96/235 (40%), Gaps = 5/235 (2%)
Query: 446 ILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLD 505
+LQP ++ LV+A+ K +E + + K + + V D + +G
Sbjct: 478 MLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQ--SYGVKPDVVTFNTLAKAYARIGSTC 535
Query: 506 QAHDLL-DEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEAL 564
A D++ M V+ + +++ Y E + E + G+ + + +L
Sbjct: 536 TAEDMIIPRMLHNKVKPNVRTCGTIVNGYCEEGKMEEALRFFYRMKELGVHPNLFVFNSL 595
Query: 565 LQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQ 624
++ + D G + M+E + + F L+ + + ++ ++ EG
Sbjct: 596 IKGFLNINDMDGVGEVVDLMEEFGV-KPDVVTFSTLMNAWSSVGDMKRCEEIYTDMLEGG 654
Query: 625 RIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIG 679
ID +H ++ + + + + AE+ L +MR G PN + +++G+ + G
Sbjct: 655 -IDPDIHAFSILAKGYARAGEPEKAEQILNQMRKFGVRPNVVIYTQIISGWCSAG 708
>gi|357494939|ref|XP_003617758.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355519093|gb|AET00717.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 906
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 56/247 (22%), Positives = 102/247 (41%), Gaps = 40/247 (16%)
Query: 447 LQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQ 506
L P + Y L+ ++AG ++E + +++ L + D A VI G +D+
Sbjct: 583 LVPDVRSYSILIHGLVKAGFSRETYKLFYEMKEQGLHL--DVLAYNTVIDGFCKSGKVDK 640
Query: 507 AHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQ 566
A+ LL+EM G++ + Y S++ + +R E L +A+S G+ L+ Y +L+
Sbjct: 641 AYQLLEEMKTKGLQPTVVTYGSVVDGLAKIDRLDEAYMLFEEAKSIGVDLNVVIYSSLI- 699
Query: 567 SKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRI 626
D G K +I + E++ KG N
Sbjct: 700 ------DGFG--------KVGRIDEAYLILEELMQKGLTPNS------------------ 727
Query: 627 DCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVT 686
+ WN ++ K + +A+ + M++L PNA T+ M+ G I K+ +
Sbjct: 728 ----YTWNCLLDALVKAEEIDEAQVCFQNMKNLKCSPNAMTYSIMINGLCMI-RKFNKAF 782
Query: 687 ELWGEMK 693
W EM+
Sbjct: 783 VFWQEMQ 789
Score = 43.9 bits (102), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 38/185 (20%), Positives = 77/185 (41%), Gaps = 3/185 (1%)
Query: 504 LDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEA 563
L +A +++ M R + S Y +L+ A ANRP + L + G + + +
Sbjct: 184 LKEAFGVIEMMRKFKFRPAFSAYTTLIGALSAANRPDPMLTLFHQMQEIGYEANVHLFTT 243
Query: 564 LLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEG 623
L++ + AL L EMK + + + + + + + + K E+K
Sbjct: 244 LVRVFAREGRIDAALSLLDEMKSNSFT-ADLVLYNVCIDCFGKVGKVDMAWKFFHEMKAQ 302
Query: 624 QRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYT 683
+ V + +I CK R + +A + + + +P +++M+ GY + GK+
Sbjct: 303 GLVPDDVT-YTTLIGVLCKARRLDEAVELFEELDLNRSVPCVYAYNTMIMGYGS-AGKFD 360
Query: 684 EVTEL 688
E L
Sbjct: 361 EAYSL 365
Score = 42.4 bits (98), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 44/189 (23%), Positives = 82/189 (43%), Gaps = 3/189 (1%)
Query: 504 LDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEA 563
LD +L+EM +AG S+ V L+ +++++++ +E ++ R + S Y
Sbjct: 149 LDYLEQILEEMSVAGFGLSNHVSVELVASFVKSHKLKEAFGVIEMMRKFKFRPAFSAYTT 208
Query: 564 LLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEG 623
L+ + L LF +M+E + H F LV+ A+ LL E+K
Sbjct: 209 LIGALSAANRPDPMLTLFHQMQEIGYEANVHL-FTTLVRVFAREGRIDAALSLLDEMKSN 267
Query: 624 QRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYT 683
+ +N I F K + A K M++ G +P+ T+ +++ G +
Sbjct: 268 S-FTADLVLYNVCIDCFGKVGKVDMAWKFFHEMKAQGLVPDDVTYTTLI-GVLCKARRLD 325
Query: 684 EVTELWGEM 692
E EL+ E+
Sbjct: 326 EAVELFEEL 334
>gi|302780485|ref|XP_002972017.1| hypothetical protein SELMODRAFT_96794 [Selaginella moellendorffii]
gi|300160316|gb|EFJ26934.1| hypothetical protein SELMODRAFT_96794 [Selaginella moellendorffii]
Length = 1116
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 79/335 (23%), Positives = 139/335 (41%), Gaps = 26/335 (7%)
Query: 420 AEVKRVLQTLLGMLQKQVELITTEHGILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEK 479
+V R LQ ML+ +EL+ P + + L+ +AG ++ + +
Sbjct: 546 GDVSRALQVYNRMLE--LELV--------PDKVTFNILIAGACKAGNFEQASALFEEMVA 595
Query: 480 ENLQVSHDDAALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRP 539
+NLQ D G +I G ++ A D+LD M GV + Y +L+ ++ R
Sbjct: 596 KNLQ--PDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNALVHGLCKSGRI 653
Query: 540 REVTALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESK-IPRSGHQEFE 598
E L + S+G D+ Y +L+ + T AL L E+K P + +
Sbjct: 654 EEACQFLEEMVSSGCVPDSITYGSLVYALCRASRTDDALQLVSELKSFGWDPDT--VTYN 711
Query: 599 MLVKGCAQNHEAGLMAKLLQE-VKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMR 657
+LV G ++ + +L+E V +G D V +N +I CK +++A + M
Sbjct: 712 ILVDGLWKSGQTEQAITVLEEMVGKGHHPD--VVTYNTLIDSLCKAGDLEEARRLHGDMS 769
Query: 658 ---SLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYT 714
S +PN T+ ++ G + G+ E EL EM + N +S L
Sbjct: 770 SRVSRCCVPNVVTYSVLINGLCKV-GRIDEARELIQEMMRKSCDVLPNI--ITYNSFLDG 826
Query: 715 FVRGGFFARANEVVAMMEEGKMFI--DKYKYRTLF 747
+ A A E++ + +G + + D + TL
Sbjct: 827 LCKQSMMAEACELMRSLRDGSLRVSPDTVTFSTLI 861
Score = 47.4 bits (111), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 83/191 (43%), Gaps = 10/191 (5%)
Query: 561 YEALLQSKIVQKDTPGALHLFK-EMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQE 619
Y +LQS +T AL +F+ EM + + + ++ G +++E G +L +E
Sbjct: 183 YNIVLQSLCRAGETARALEIFRGEMARDGVAPT-IVTYNTIINGLCKSNELGAGMELFEE 241
Query: 620 -VKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAI 678
V+ G D V +N +I CK +++A + M S +PN T+ ++ G +
Sbjct: 242 LVERGHHPD--VVTYNTLIDSLCKAGDLEEARRLHGDMSSRSCVPNVVTYSVLINGLCKV 299
Query: 679 GGKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFI 738
G+ E EL EM + N +S L + A A E++ + +G + +
Sbjct: 300 -GRIDEARELIQEMTRKSCDVLPNI--ITYNSFLDGLCKQSMTAEACELMRSLRDGSLRV 356
Query: 739 --DKYKYRTLF 747
D + TL
Sbjct: 357 SPDTVTFSTLI 367
Score = 44.3 bits (103), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 121/599 (20%), Positives = 226/599 (37%), Gaps = 80/599 (13%)
Query: 109 AWKLYEQHMQMDGFPRKTLVNKILTSFVESLDSKWLEKAYGLVEQAFEEGKQILLEKEPL 168
A ++Y + ++++ P K N ++ ++ + E+A L FEE L+ + +
Sbjct: 551 ALQVYNRMLELELVPDKVTFNILIAGACKAGN---FEQASAL----FEEMVAKNLQPDVM 603
Query: 169 IYLSL--GLSKCGLPVPASTILRKLVATEQYPPVTAWSAILAHMSLTAPGAYLAAELILE 226
+ +L GL K G A IL L+ PP L H L G A LE
Sbjct: 604 TFGALIDGLCKAGQVEAARDIL-DLMGNLGVPPNVVTYNALVH-GLCKSGRIEEACQFLE 661
Query: 227 IGYLFQDGRVDPRKKCNAPLIAMKPNTNTFNIALAGCLLFETTRKAEQLLDIMPRIGVKA 286
+ G V P++ T+ + T A QL+ + G
Sbjct: 662 --EMVSSGCV--------------PDSITYGSLVYALCRASRTDDALQLVSELKSFGWDP 705
Query: 287 DSNLLIIMAHIYERNGRREELRKLQRHIDEAVNLSDIQFRQFYNCLLSCHLKFGDLNSAS 346
D+ I+ ++G+ E+ + ++E V YN L+ K GDL A
Sbjct: 706 DTVTYNILVDGLWKSGQTEQAITV---LEEMVGKGHHPDVVTYNTLIDSLCKAGDLEEAR 762
Query: 347 KMVLEMLQRAKEA--RNSLAAAMLPFNAVGVNNRTPSEQNVNCTNSVDLENSGIIENHIL 404
++ +M R N + ++L N + R + + + ++ ++ N I+
Sbjct: 763 RLHGDMSSRVSRCCVPNVVTYSVL-INGLCKVGRIDEAREL--IQEMMRKSCDVLPN-II 818
Query: 405 SYEDFTKDRKFVALEAEVKRVLQTLL-GMLQKQVELITTEHGILQPTEKIYIKLVKAFLE 463
+Y F ++ AE ++++L G L+ + P + L+ +
Sbjct: 819 TYNSFLDGLCKQSMMAEACELMRSLRDGSLR------------VSPDTVTFSTLIDGLCK 866
Query: 464 AGKTKELTHFLIKAEKENLQVSHDDAALG----HVITLCISLGWL------DQAHDLLDE 513
G+T E + DD G +V+T + + L ++AH +++
Sbjct: 867 CGQTDEACNVF------------DDMIAGGYVPNVVTYNVLMNGLCKTDKMERAHAMIES 914
Query: 514 MHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQKD 573
M GV Y+ L+ A+ +A+ E LL S G + + +++
Sbjct: 915 MVDKGVTPDVITYSVLVDAFCKASHVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDQ 974
Query: 574 TPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRIDCGVHDW 633
+ A +F +M + L+ G + AG LL + D + +
Sbjct: 975 SGEAFQMFDDMTLKHGLAPDKITYCTLIDGLFRTGWAGQAEVLLDAMP-----DPDTYAF 1029
Query: 634 NNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEM 692
N I+ K + D +AL RM L +P+ TF+ ++ G A G + + + L+ EM
Sbjct: 1030 NCCINGLSK---LGDVSRALHRMLELELVPDKVTFNILIAG-ACKAGNFEQASALFEEM 1084
>gi|18407969|ref|NP_564822.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806279|sp|Q9SH60.2|PP103_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g64100
gi|332196071|gb|AEE34192.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 666
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/252 (21%), Positives = 103/252 (40%), Gaps = 11/252 (4%)
Query: 444 HGILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGW 503
H + P Y ++ F + + + H +L S D +I +
Sbjct: 394 HRCIFPDTVTYNSMIYGFCKHNRFDDAKHMF------DLMASPDVVTFNTIIDVYCRAKR 447
Query: 504 LDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEA 563
+D+ LL E+ G+ A+++ Y +L+ + E + L ++ S G+ D
Sbjct: 448 VDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNI 507
Query: 564 LLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVK-E 622
LL + AL LF+ ++ SKI + +++ G + + L +
Sbjct: 508 LLYGFCENEKLEEALELFEVIQMSKIDLDT-VAYNIIIHGMCKGSKVDEAWDLFCSLPIH 566
Query: 623 GQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKY 682
G D V +N +I FC K + DA +M+ GH P+ T+++++ G G+
Sbjct: 567 GVEPD--VQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLK-AGEI 623
Query: 683 TEVTELWGEMKS 694
+ EL EM+S
Sbjct: 624 DKSIELISEMRS 635
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/236 (22%), Positives = 98/236 (41%), Gaps = 14/236 (5%)
Query: 499 ISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDA 558
+ G+L +A L D+M G+ + +L+ R E AL+ G+ +D
Sbjct: 203 VETGFL-EAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDV 261
Query: 559 SCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQ 618
Y ++ DT AL+L +M+E+ I ++ + C H + +
Sbjct: 262 VTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSE 321
Query: 619 EVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAI 678
+++G I V +N +I FC DA++ L+ M P+ TF+++++ +
Sbjct: 322 MLEKG--IAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISA-SVK 378
Query: 679 GGKYTEVTELWGEMKS---FASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMM 731
GK E +L EM F + + N S++Y F + F A + +M
Sbjct: 379 EGKLFEAEKLCDEMLHRCIFPDTVTYN-------SMIYGFCKHNRFDDAKHMFDLM 427
>gi|297797589|ref|XP_002866679.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297312514|gb|EFH42938.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 915
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 70/323 (21%), Positives = 131/323 (40%), Gaps = 31/323 (9%)
Query: 435 KQVELITTEHGILQPTEKIYIKLVKAFLEAGKTKELTHF---LIKAEKENLQVSHDDAAL 491
KQV + E + P Y K+V + + G +E + +++A + ++ +
Sbjct: 203 KQVYMEMLEDKVC-PNIYTYNKMVNGYCKVGNVEEANQYVSMIVEAGLDPDFFTYTSLIM 261
Query: 492 GHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARS 551
G+ LD A + EM L G R + Y L+ R E L +
Sbjct: 262 GYC-----QRKDLDSAFKVFKEMPLKGCRRNEVAYTHLIHGLCVERRIDEAMDLFVKMKD 316
Query: 552 AGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAG 611
Y L+++ + AL+L KEM+E I + H ++ C+Q
Sbjct: 317 DDCYPTVRTYTVLIKALCGSERKSEALNLVKEMEEKGIKPNIHTYTVLIDSLCSQCK--- 373
Query: 612 LMAKLLQEVKE--GQRIDCG----VHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNA 665
L++ +E GQ ++ G V +N +I+ +CK+ +++DA ++ M S PN
Sbjct: 374 -----LEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDALDVVELMESRNLRPNT 428
Query: 666 QTFHSMVTGYAAIG-GKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARA 724
+T++ ++ GY K V E K + N S++ R G F A
Sbjct: 429 RTYNELIKGYCKRNVHKAMGVLNKMLERKVLPDVVTYN-------SLIDGQCRSGNFDSA 481
Query: 725 NEVVAMMEEGKMFIDKYKYRTLF 747
++++M + + D + Y ++
Sbjct: 482 YRLLSLMNDRGLVPDPWTYTSMI 504
Score = 47.4 bits (111), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 35/176 (19%), Positives = 75/176 (42%), Gaps = 2/176 (1%)
Query: 504 LDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEA 563
+++A DL D + V + +Y +L+ Y +A + E +L S ++ + A
Sbjct: 513 VEEACDLFDSLEQKDVIPNVVMYTALIDGYCKAGKVNEAHLMLEKMLSKNCLPNSLTFNA 572
Query: 564 LLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEG 623
L+ A L ++M + + + + ++ + + Q + G
Sbjct: 573 LIHGLCTDGKLKEATLLEEKMVKIDLQPTVSTDTILIHRLLKDGDFDHAYRRFQQMLSSG 632
Query: 624 QRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIG 679
+ D H + I +C++ +QDAE + +M+ G P+ T+ S++ GY +G
Sbjct: 633 TKPD--AHTYTTFIQTYCREGRLQDAEDMVAKMKENGVSPDLFTYSSLIKGYGDLG 686
Score = 42.7 bits (99), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 54/254 (21%), Positives = 92/254 (36%), Gaps = 11/254 (4%)
Query: 501 LGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASC 560
G +D+ + EM V + Y ++ Y + E + AG+ D
Sbjct: 196 FGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKVGNVEEANQYVSMIVEAGLDPDFFT 255
Query: 561 YEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEV 620
Y +L+ +KD A +FKEM K R + L+ G L ++
Sbjct: 256 YTSLIMGYCQRKDLDSAFKVFKEMP-LKGCRRNEVAYTHLIHGLCVERRIDEAMDLFVKM 314
Query: 621 KEGQRIDC--GVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAI 678
K+ DC V + +I C +A +K M G PN T+ ++ +
Sbjct: 315 KDD---DCYPTVRTYTVLIKALCGSERKSEALNLVKEMEEKGIKPNIHTYTVLIDSLCS- 370
Query: 679 GGKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFI 738
K + EL G+M ++ L++ + + G A +VV +ME +
Sbjct: 371 QCKLEKARELLGQMLEKGLMPNVITYNALING----YCKRGMIEDALDVVELMESRNLRP 426
Query: 739 DKYKYRTLFLKYHK 752
+ Y L Y K
Sbjct: 427 NTRTYNELIKGYCK 440
Score = 39.3 bits (90), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 37/189 (19%), Positives = 77/189 (40%), Gaps = 19/189 (10%)
Query: 502 GWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCY 561
G L A D++ +M GV Y+SL+K Y + R +L+ G + +
Sbjct: 651 GRLQDAEDMVAKMKENGVSPDLFTYSSLIKGYGDLGRTNSAFVVLKRMHDTGCEPSQHTF 710
Query: 562 EALLQSKI------VQKDTPG------------ALHLFKEMKESKIPRSGHQEFEMLVKG 603
+L++ + V+ PG + L ++M E + + + +E L+ G
Sbjct: 711 LSLIKHLLEMKYGKVKGGEPGVCVMSNMMEFDIVVELLEKMVEHGVTPNA-KSYEKLMLG 769
Query: 604 CAQNHEAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLP 663
+ + K+ +++ + I +N ++ CK +A K + M +GHLP
Sbjct: 770 ICEIGNLRVAEKVFDHMQQKEGISPSELVFNALLSCCCKLEKHNEAAKVVDDMICVGHLP 829
Query: 664 NAQTFHSMV 672
++ ++
Sbjct: 830 QLESCKILI 838
>gi|302809105|ref|XP_002986246.1| hypothetical protein SELMODRAFT_123660 [Selaginella moellendorffii]
gi|300146105|gb|EFJ12777.1| hypothetical protein SELMODRAFT_123660 [Selaginella moellendorffii]
Length = 725
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 58/260 (22%), Positives = 111/260 (42%), Gaps = 8/260 (3%)
Query: 494 VITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAG 553
VI L +D+A ++D+M G + + Y +L+ + L+R G
Sbjct: 120 VINGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVELVRKMTERG 179
Query: 554 IQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLM 613
+ +A Y ++ + AL LFKEM+ES + +V ++ +
Sbjct: 180 YRPNAITYNNIMHGLCSGRKLDSALQLFKEMEESGSCPPDVFTYSTIVDSLVKSGKVDDA 239
Query: 614 AKLLQE-VKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMV 672
+L++ V +G + V +++++H CK + +A L+RM G PN T+++++
Sbjct: 240 CRLVEAMVSKGCSPN--VVTYSSLLHGLCKAGKLDEATALLQRMTRSGCSPNIVTYNTII 297
Query: 673 TGYAAIGGKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMME 732
G+ + G+ E L EM ++ LLD+ F + G A +V +M
Sbjct: 298 DGHCKL-GRIDEAYHLLEEMVDGGCQPNVVTYTVLLDA----FCKCGKAEDAIGLVEVMV 352
Query: 733 EGKMFIDKYKYRTLFLKYHK 752
E + + Y +L + K
Sbjct: 353 EKGYVPNLFTYNSLLDMFCK 372
Score = 56.2 bits (134), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 90/440 (20%), Positives = 165/440 (37%), Gaps = 58/440 (13%)
Query: 251 PNTNTFNIALAGCLLFETTRKAEQLLDIMPRIGVKADSNLLIIMAHIYERNGRREELRKL 310
PN ++N L G A LL+ M G D ++++ NG L KL
Sbjct: 77 PNVFSYNTVLHGFCKANRVENALWLLEQMVMRGCPPD-----VVSYTTVING----LCKL 127
Query: 311 QRHIDEAVNLSDIQFRQ-------FYNCLLSCHLKFGDLNSASKMVLEMLQRAKEARNSL 363
+ +DEA + D ++ Y L+ + GDL+ A ++V +M +R
Sbjct: 128 DQ-VDEACRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVELVRKMTERGYRP---- 182
Query: 364 AAAMLPFNAVGVNNRTPSEQNVNCTNSV-----DLENSGIIENHILSYEDFTKDRKFVAL 418
NA+ NN + +S ++E SG + +Y +
Sbjct: 183 -------NAITYNNIMHGLCSGRKLDSALQLFKEMEESGSCPPDVFTYSTIVDS---LVK 232
Query: 419 EAEVKRVLQTLLGMLQKQVELITTEHGILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAE 478
+V + + M+ K P Y L+ +AGK E T L +
Sbjct: 233 SGKVDDACRLVEAMVSKGC----------SPNVVTYSSLLHGLCKAGKLDEATALLQRMT 282
Query: 479 KENLQ---VSHDDAALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIE 535
+ V+++ GH LG +D+A+ LL+EM G + + Y LL A+ +
Sbjct: 283 RSGCSPNIVTYNTIIDGHC-----KLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCK 337
Query: 536 ANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEM-KESKIPRSGH 594
+ + L+ G + Y +LL + + A L M ++ +P
Sbjct: 338 CGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVPNV-- 395
Query: 595 QEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALK 654
+ ++ G + + LL+++ + + +N +I CK + A +
Sbjct: 396 VSYNTVIAGLCKATKVHEGVLLLEQMLSNNCVP-DIVTFNTIIDAMCKTYRVDIAYELFN 454
Query: 655 RMRSLGHLPNAQTFHSMVTG 674
++ G PN T++S+V G
Sbjct: 455 LIQESGCTPNLVTYNSLVHG 474
Score = 44.3 bits (103), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 37/166 (22%), Positives = 70/166 (42%), Gaps = 3/166 (1%)
Query: 514 MHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQKD 573
M+ G++A + V+ S+L+ +A + + R+ S D+ Y ++
Sbjct: 1 MNRKGLKAHAGVHKSILRGLCDAGQCSDAVLHFREM-SKTCPPDSVTYNTMINGLSKSDR 59
Query: 574 TPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRIDCGVHDW 633
A+ L +EM ++ + +L C N + L Q V G D V +
Sbjct: 60 LDDAIRLLEEMVDNGFAPNVFSYNTVLHGFCKANRVENALWLLEQMVMRGCPPD--VVSY 117
Query: 634 NNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIG 679
VI+ CK + +A + + +M G PN T+ ++V G+ +G
Sbjct: 118 TTVINGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGFCRVG 163
Score = 43.9 bits (102), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 33/132 (25%), Positives = 54/132 (40%), Gaps = 14/132 (10%)
Query: 447 LQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLD- 505
P Y L+ F + G + E LQ+ + V+T I + WL
Sbjct: 567 FDPGAITYGTLIDGFCKTGN--------LDKALEILQLLLSKGSYPDVVTFSIFIDWLSK 618
Query: 506 -----QAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASC 560
QA +LL+ M AG+ + Y +LLK + +A+R + L R G + D +
Sbjct: 619 RGRLRQAGELLETMLRAGLVPDTVTYNTLLKGFCDASRTEDAVDLFEVMRQCGCEPDNAT 678
Query: 561 YEALLQSKIVQK 572
Y L+ + +K
Sbjct: 679 YTTLVGHLVDKK 690
>gi|226493938|ref|NP_001152190.1| ATP binding protein [Zea mays]
gi|195653677|gb|ACG46306.1| ATP binding protein [Zea mays]
gi|413926813|gb|AFW66745.1| ATP binding protein [Zea mays]
Length = 376
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 62/251 (24%), Positives = 108/251 (43%), Gaps = 22/251 (8%)
Query: 507 AHDLLDEMHLAG----VRASSSVYASLL---KAYIEANRPREVTALLRDARSAGIQLDAS 559
A LLD++H +G R + + +LL A PRE++ +L R G++ DA
Sbjct: 125 ARSLLDKLHPSGEDGCPRPNPAPRGALLALADAVCRRGEPREISRVLPVLRDHGVRADAH 184
Query: 560 CYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAK---- 615
Y AL+++ + D L +F++M+ + + L+ G A+ AG++AK
Sbjct: 185 LYNALMKANVAADDPGAVLRVFRQMRSDGV-DPDLVTYNTLIFGLAR---AGMVAKARAF 240
Query: 616 LLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGY 675
L EG D V + ++++ C K A K L+ M+ G PN +T+ +++ G
Sbjct: 241 LDAMAAEGHLPD--VVTYTSLMNGMCVKGDALGALKLLEEMQGKGCQPNERTYSTLLMGL 298
Query: 676 AAIGGKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGK 735
K + E++ M ++ + S + R G A A EV + K
Sbjct: 299 CK-NKKLDKAVEVYKSM----AAAGTKLESPAYASFVRALCRSGSVADAYEVFDYAIQTK 353
Query: 736 MFIDKYKYRTL 746
F + Y L
Sbjct: 354 SFAEVTAYSEL 364
>gi|125584236|gb|EAZ25167.1| hypothetical protein OsJ_08968 [Oryza sativa Japonica Group]
Length = 566
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 56/238 (23%), Positives = 106/238 (44%), Gaps = 17/238 (7%)
Query: 521 ASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHL 580
ASS++ +L K+ + A + + R AG+ ++ Y A+L + D A L
Sbjct: 147 ASSALLTALAKSRMTATARKVFDQMTR----AGVAMNTHVYNAMLHVCLKAGDAALAESL 202
Query: 581 FKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFF 640
M + +P ++ C + + M ++E E Q + V WN++IH
Sbjct: 203 MTRMDAAGVPLDRFSFNTVIALYCRKGMQYEAMC--VRERMENQGVKADVVTWNSLIHGL 260
Query: 641 CKKRLMQDA---EKALK---RMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEMKS 694
CK+R +++A E+A+K M ++G LP T+++++ GK EV L EM
Sbjct: 261 CKERRVKEASDLEEAVKLRGEMEAMGMLPGVATYNAILRKLCE-DGKMKEVNVLLNEM-- 317
Query: 695 FASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFIDKYKYRTLFLKYHK 752
+ D ++++ + + G A +V M E + +D++ Y+ L + K
Sbjct: 318 --DERKVQADHVTCNTLINAYCKRGDMTSALKVKRRMMESGLQLDQFTYKALVHGFCK 373
>gi|449446624|ref|XP_004141071.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g06000-like [Cucumis sativus]
Length = 548
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/194 (23%), Positives = 83/194 (42%), Gaps = 3/194 (1%)
Query: 487 DDAALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALL 546
D + L +++ +G LD A + L+E+H G++ S VY +LL ++ N E L
Sbjct: 143 DSSILELLVSSYARMGKLDSAKNFLNEVHCYGIKVSPFVYNNLLNMLVKQNLVDEAVLLF 202
Query: 547 RDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKE-SKIPRSGHQEFEMLVKGCA 605
R+ D + L++ + A F+ M P + L+ G
Sbjct: 203 REHLEPYFVPDVYSFNILIRGLCRIGEIDKAFEFFQNMGNFGCFP--DIVSYNTLINGFC 260
Query: 606 QNHEAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNA 665
+ +E LL+E + + V + ++I +CK M+ A + M S G PN
Sbjct: 261 RVNEISKGHDLLKEDMLIKGVSPDVITYTSIISGYCKLGDMKAASELFDEMVSSGIKPND 320
Query: 666 QTFHSMVTGYAAIG 679
TF+ ++ G+ +G
Sbjct: 321 FTFNVLIDGFGKVG 334
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 84/202 (41%), Gaps = 9/202 (4%)
Query: 496 TLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQ 555
LC +G D A + D M G+ SS+ L+ +Y + L + GI+
Sbjct: 118 NLC-KVGLNDSAKIVFDCMRSDGILPDSSILELLVSSYARMGKLDSAKNFLNEVHCYGIK 176
Query: 556 LDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAK 615
+ Y LL + Q A+ LF+E E + F +L++G + G + K
Sbjct: 177 VSPFVYNNLLNMLVKQNLVDEAVLLFREHLEPYFVPDVYS-FNILIRGLCR---IGEIDK 232
Query: 616 LLQEVKEGQRIDC--GVHDWNNVIHFFCKKRLMQDAEKALKR-MRSLGHLPNAQTFHSMV 672
+ + C + +N +I+ FC+ + LK M G P+ T+ S++
Sbjct: 233 AFEFFQNMGNFGCFPDIVSYNTLINGFCRVNEISKGHDLLKEDMLIKGVSPDVITYTSII 292
Query: 673 TGYAAIGGKYTEVTELWGEMKS 694
+GY + G +EL+ EM S
Sbjct: 293 SGYCKL-GDMKAASELFDEMVS 313
Score = 47.0 bits (110), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 51/274 (18%), Positives = 109/274 (39%), Gaps = 8/274 (2%)
Query: 454 YIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQAHDLLDE 513
Y L+ F + + H L+K + VS D +I+ LG + A +L DE
Sbjct: 252 YNTLINGFCRVNEISK-GHDLLKEDMLIKGVSPDVITYTSIISGYCKLGDMKAASELFDE 310
Query: 514 MHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQKD 573
M +G++ + + L+ + + R + G D + +L+ + +
Sbjct: 311 MVSSGIKPNDFTFNVLIDGFGKVGNMRSAMVMYEKMLLLGCLPDVVTFTSLIDGYCREGE 370
Query: 574 TPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRIDCGVHDW 633
L L++EMK + + + + +L+ + + L+ +K + + +
Sbjct: 371 VNQGLKLWEEMKVRNLSPNVYT-YAVLINALCKENRIREARNFLRHLKSSEVVP-KPFIY 428
Query: 634 NNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEMK 693
N VI FCK + +A + M+ P+ TF ++ G + G+ E + +M
Sbjct: 429 NPVIDGFCKAGKVDEANFIVAEMQEKKCRPDKITFTILIIG-NCMKGRMVEAISTFYKMI 487
Query: 694 SFASSTSMNFDEELLDSVLYTFVRGGFFARANEV 727
DE ++S++ ++ G A+++
Sbjct: 488 EINCVP----DEITINSLISCLLKAGMPNEASQI 517
>gi|4836917|gb|AAD30619.1|AC007153_11 similar to indole-3-acetate beta-glucosyltransferase [Arabidopsis
thaliana]
Length = 1184
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 75/317 (23%), Positives = 135/317 (42%), Gaps = 19/317 (5%)
Query: 447 LQPTEKIYIKLVKAFLEAGKTKE---LTHFLIKAEKENLQVSHDDAALGHVITLCISLGW 503
L+P + +L+ + +AG K+ + + +I+A V++ G LC G
Sbjct: 860 LEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDG----LCKE-GD 914
Query: 504 LDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEA 563
LD A++LL EM G++ + Y S++ ++ E L+ + +AG+ D Y
Sbjct: 915 LDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTT 974
Query: 564 LLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEG 623
L+ + + A + KEM + + F +L+ G + KLL +
Sbjct: 975 LMDAYCKSGEMDKAQEILKEMLGKGL-QPTIVTFNVLMNGFCLHGMLEDGEKLLNWML-A 1032
Query: 624 QRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYT 683
+ I +N+++ +C + ++ A K M S G P+ +T+ ++V G+
Sbjct: 1033 KGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCK-ARNMK 1091
Query: 684 EVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFIDKYKY 743
E L+ EMK S S++ L+ F++ F A EV M + DK
Sbjct: 1092 EAWFLFQEMKGKGFSVSVSTYSVLIKG----FLKRKKFLEAREVFDQMRREGLAADK--- 1144
Query: 744 RTLFLKYHKTLYKGKTP 760
+F + T YKGK P
Sbjct: 1145 -EIFDFFSDTKYKGKRP 1160
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 64/292 (21%), Positives = 110/292 (37%), Gaps = 11/292 (3%)
Query: 463 EAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQAHDLLDEMHLAGVRAS 522
+ G+ KE H L+ E + + D + V+ G LD+ L++ M G++ +
Sbjct: 701 QLGRIKEAHHLLLLMELKGY--TPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPN 758
Query: 523 SSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFK 582
S +Y S++ + E + GI D Y L+ + D A F
Sbjct: 759 SYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFY 818
Query: 583 EMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEV-KEGQRIDCGVHDWNNVIHFFC 641
EM I + ++ G Q + KL E+ +G D + +I+ +C
Sbjct: 819 EMHSRDI-TPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVT--FTELINGYC 875
Query: 642 KKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEMKSFASSTSM 701
K M+DA + M G PN T+ +++ G G EL EM ++
Sbjct: 876 KAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCK-EGDLDSANELLHEMWKIGLQPNI 934
Query: 702 NFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFIDKYKYRTLFLKYHKT 753
+S++ + G A ++V E + D Y TL Y K+
Sbjct: 935 F----TYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKS 982
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 75/377 (19%), Positives = 149/377 (39%), Gaps = 33/377 (8%)
Query: 248 AMKPNTNTFNIALAGCLLFETTRKAEQLLDIMPRIGVKADSNLLIIMAHIYERNGRREEL 307
+KPN+ + + +AE+ M R G+ D+ ++ + + +R ++
Sbjct: 754 GLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDT---VVYTTLIDGFCKRGDI 810
Query: 308 RKLQRHIDEAVNLSDIQFRQFYNCLLSCHLKFGDLNSASKMVLEMLQRAKEAR------- 360
R + E + Y ++S + GD+ A K+ EM + E
Sbjct: 811 RAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTEL 870
Query: 361 -NSLAAAMLPFNAVGVNNR-TPSEQNVNCTNSVDLENSGIIENHILSYEDFTKDRKFVAL 418
N A +A V+N + + N L + E + S + + + L
Sbjct: 871 INGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGL 930
Query: 419 EAEV---KRVLQTLL--GMLQKQVELITT-EHGILQPTEKIYIKLVKAFLEAGKTKELTH 472
+ + ++ L G +++ V+L+ E L Y L+ A+ ++G+ +
Sbjct: 931 QPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQE 990
Query: 473 FLIKAEKENLQVSHDDAALGHVITLCISL------GWLDQAHDLLDEMHLAGVRASSSVY 526
L + + LQ + ++T + + G L+ LL+ M G+ +++ +
Sbjct: 991 ILKEMLGKGLQPT--------IVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTF 1042
Query: 527 ASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKE 586
SL+K Y N + TA+ +D S G+ D YE L++ ++ A LF+EMK
Sbjct: 1043 NSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKG 1102
Query: 587 SKIPRSGHQEFEMLVKG 603
S + +L+KG
Sbjct: 1103 KGFSVS-VSTYSVLIKG 1118
>gi|147859909|emb|CAN83144.1| hypothetical protein VITISV_040783 [Vitis vinifera]
Length = 724
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/238 (22%), Positives = 105/238 (44%), Gaps = 4/238 (1%)
Query: 443 EHGILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLG 502
+ G L P + Y L+K +++ G K+ I +E E S D+ +I + G
Sbjct: 389 KEGGLMPRTRAYNALLKGYVKTGSLKDAES--IVSEMERSGFSPDEHTYSLLIDAYANAG 446
Query: 503 WLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYE 562
+ A +L EM +GVR +S V++ +L +Y + + ++ +LR+ R++G+ D Y
Sbjct: 447 RWESARIVLKEMEASGVRPNSYVFSRILASYRDRGKWQKSFQVLREMRNSGVSPDRHFYN 506
Query: 563 ALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKE 622
++ + AL F M+ + ++ C H +L + ++E
Sbjct: 507 VMIDTFGKCNCLDHALATFDRMRMEGVQPDAVTWNTLIDCHCKSGHH-NKAEELFEAMQE 565
Query: 623 GQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGG 680
C +N +I+ F ++ +D + L +M+S G L N T+ ++ AI
Sbjct: 566 SGCSPCTT-TYNIMINSFGEQERWEDVKTLLGKMQSQGLLANVVTYTTLGLSEQAINA 622
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/241 (22%), Positives = 104/241 (43%), Gaps = 13/241 (5%)
Query: 457 LVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQAHDLLDEMHL 516
++ F ++G FL + L S A L VIT + G ++A + +E+
Sbjct: 333 IIVGFAKSGDVNRAMSFLAMVQGNGL--SPKTATLVAVITALGNAGRTEEAEAIFEELKE 390
Query: 517 AGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQKDTPG 576
G+ + Y +LLK Y++ ++ +++ + +G D Y L+ +
Sbjct: 391 GGLMPRTRAYNALLKGYVKTGSLKDAESIVSEMERSGFSPDEHTYSLLIDAYANAGRWES 450
Query: 577 ALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRIDCGV----HD 632
A + KEM+ S + R F ++ A + G K Q ++E + + GV H
Sbjct: 451 ARIVLKEMEASGV-RPNSYVFSRIL---ASYRDRGKWQKSFQVLREMR--NSGVSPDRHF 504
Query: 633 WNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEM 692
+N +I F K + A RMR G P+A T+++++ + G + + EL+ M
Sbjct: 505 YNVMIDTFGKCNCLDHALATFDRMRMEGVQPDAVTWNTLIDCHCK-SGHHNKAEELFEAM 563
Query: 693 K 693
+
Sbjct: 564 Q 564
Score = 41.2 bits (95), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 44/245 (17%), Positives = 102/245 (41%), Gaps = 3/245 (1%)
Query: 433 LQKQVELITTEHGILQPTEKI-YIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAAL 491
L+K + L++ P++ + Y ++++ K+ I AE E+ ++ D L
Sbjct: 271 LEKALNLMSRMRRDGYPSDFVNYSFIIQSLTRTNKSDSSMLQKIYAEIESDKIELDGQLL 330
Query: 492 GHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARS 551
+I G +++A L + G+ ++ +++ A A R E A+ + +
Sbjct: 331 NDIIVGFAKSGDVNRAMSFLAMVQGNGLSPKTATLVAVITALGNAGRTEEAEAIFEELKE 390
Query: 552 AGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAG 611
G+ Y ALL+ + A + EM+ S H + +L+ A N
Sbjct: 391 GGLMPRTRAYNALLKGYVKTGSLKDAESIVSEMERSGFSPDEHT-YSLLIDAYA-NAGRW 448
Query: 612 LMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSM 671
A+++ + E + + ++ ++ + + Q + + L+ MR+ G P+ ++ M
Sbjct: 449 ESARIVLKEMEASGVRPNSYVFSRILASYRDRGKWQKSFQVLREMRNSGVSPDRHFYNVM 508
Query: 672 VTGYA 676
+ +
Sbjct: 509 IDTFG 513
>gi|145336957|ref|NP_176459.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206054|sp|Q9SI78.1|PPR93_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g62720
gi|6630449|gb|AAF19537.1|AC007190_5 F23N19.8 [Arabidopsis thaliana]
gi|62320514|dbj|BAD95075.1| PPR-repeat protein [Arabidopsis thaliana]
gi|332195876|gb|AEE33997.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 485
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/231 (21%), Positives = 95/231 (41%), Gaps = 9/231 (3%)
Query: 447 LQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVIT-LCISLGWLD 505
+ P + ++ F++ GK E + E V D +I LC+ G +D
Sbjct: 240 IVPNVITFTAVIDVFVKEGKFSEAMK--LYEEMTRRCVDPDVFTYNSLINGLCMH-GRVD 296
Query: 506 QAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALL 565
+A +LD M G Y +L+ + ++ R E T L R+ G+ D Y ++
Sbjct: 297 EAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTII 356
Query: 566 QSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQR 625
Q A +F M R + + +L+ G N L + +++ +
Sbjct: 357 QGYFQAGRPDAAQEIFSRMDS----RPNIRTYSILLYGLCMNWRVEKALVLFENMQKSE- 411
Query: 626 IDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYA 676
I+ + +N VIH CK ++DA + + G P+ ++ +M++G+
Sbjct: 412 IELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFC 462
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/250 (21%), Positives = 104/250 (41%), Gaps = 11/250 (4%)
Query: 448 QPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQA 507
+P L+ F + + + + K E+ + D +I +G ++ A
Sbjct: 136 EPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFR--PDVVIYNTIIDGSCKIGLVNDA 193
Query: 508 HDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQS 567
+L D M GVRA + Y SL+ + R + L+RD I + + A++
Sbjct: 194 VELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDV 253
Query: 568 KIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQN---HEAGLMAKLLQEVKEGQ 624
+ + A+ L++EM + + L+ G + EA M L+ V +G
Sbjct: 254 FVKEGKFSEAMKLYEEMTRRCVDPDVFT-YNSLINGLCMHGRVDEAKQMLDLM--VTKGC 310
Query: 625 RIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTE 684
D V +N +I+ FCK + + + K + M G + + T+++++ GY G+
Sbjct: 311 LPD--VVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQ-AGRPDA 367
Query: 685 VTELWGEMKS 694
E++ M S
Sbjct: 368 AQEIFSRMDS 377
>gi|125553201|gb|EAY98910.1| hypothetical protein OsI_20865 [Oryza sativa Indica Group]
Length = 440
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 97/226 (42%), Gaps = 8/226 (3%)
Query: 502 GWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCY 561
G L A L+DEM GV +++ YA L++ +A+R + L+ D G Q D Y
Sbjct: 213 GELGAAERLIDEMARRGVAPNAATYALLMRGLCDADRHADAEKLMFDMEYRGCQADVVNY 272
Query: 562 EALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVK 621
L+ S+ + D G L M++ K+ + + +L++ A + L E++
Sbjct: 273 GVLMSSRARRGDADGVRELLSAMRKRKL-KPDDASYNILIRCLCDAGRADEAHRALLEMQ 331
Query: 622 EGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGK 681
+ G + ++ C+ R + M + GH P A+TF + G GK
Sbjct: 332 LRGTVP-GAATYRVLVDGCCRARDFDLGLRVFNAMMASGHCPQARTFRHLARGLGE-DGK 389
Query: 682 YTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEV 727
E + +M + M+ D + +V+ T VR +A+E+
Sbjct: 390 AEEAFFVLEQM----ARREMSLDADGWQAVV-TCVRSSCSTQASEI 430
>gi|6630464|gb|AAF19552.1|AC007190_20 F23N19.4 [Arabidopsis thaliana]
Length = 1244
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 61/253 (24%), Positives = 106/253 (41%), Gaps = 13/253 (5%)
Query: 504 LDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEA 563
++ A D E+ G+R + Y +L+ ++R + LL D I + Y A
Sbjct: 309 VNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSA 368
Query: 564 LLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKG-CAQNH--EAGLMAKLLQEV 620
LL + + A LF+EM I + L+ G C + EA M L+ V
Sbjct: 369 LLDAFVKNGKVLEAKELFEEMVRMSID-PDIVTYSSLINGLCLHDRIDEANQMFDLM--V 425
Query: 621 KEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGG 680
+G D V +N +I+ FCK + ++D K + M G + N T+++++ G+ G
Sbjct: 426 SKGCLAD--VVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQ-AG 482
Query: 681 KYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFIDK 740
+ E + +M F S D + +L G +A + M++ +M +D
Sbjct: 483 DVDKAQEFFSQMDFFGISP----DIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDI 538
Query: 741 YKYRTLFLKYHKT 753
Y T+ KT
Sbjct: 539 VTYTTVIRGMCKT 551
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 120/594 (20%), Positives = 241/594 (40%), Gaps = 80/594 (13%)
Query: 89 DPAKLSAEIENAINEHRYGDAWKLYEQHMQMDGFPRKTLVNKILTSFVESLDSKWLEKAY 148
D + + + +R DA L ++ +++ P N I+ S ++ K + A+
Sbjct: 257 DRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKT---KRVNDAF 313
Query: 149 GLVEQAFEEGKQILLEKEPLIYLSL--GLSKCGLPVPASTILRKLVATEQYPPVTAWSAI 206
++ +G + + Y +L GL A+ +L ++ + P V +SA+
Sbjct: 314 DFFKEIERKG----IRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSAL 369
Query: 207 LAHMSLTAPGAYLAAELILEIGYLFQDGRVDPRKKCNAPLIAMKPNTNTFNIALAGCLLF 266
L A++ +LE LF++ +++ P+ T++ + G L
Sbjct: 370 L--------DAFVKNGKVLEAKELFEE----------MVRMSIDPDIVTYSSLINGLCLH 411
Query: 267 ETTRKAEQLLDIMPRIGVKADSNLLIIMAHIYERNGRREELRKLQRHIDEAVNLSDIQFR 326
+ +A Q+ D+M G AD + + + + R E+ KL R + + +S+
Sbjct: 412 DRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVT- 470
Query: 327 QFYNCLLSCHLKFGDLNSASKMVLEMLQRAKEARNSLAAAMLPFNAVGVNNRTPSEQNVN 386
YN L+ + GD++ A + +M + G+ +P N
Sbjct: 471 --YNTLIQGFFQAGDVDKAQEFFSQM------------------DFFGI---SPDIWTYN 507
Query: 387 CTNSVDLENSGIIENHILSYEDFTK---DRKFVALEAEVKRVLQTLLGMLQKQVELITT- 442
L ++G +E ++ +ED K D V ++ + +T G +++ L +
Sbjct: 508 ILLG-GLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKT--GKVEEAWSLFCSL 564
Query: 443 EHGILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLG 502
L+P Y ++ G E+ K ++E L +D L S G
Sbjct: 565 SLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLM--KNDCTL--------SDG 614
Query: 503 WLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYE 562
+ + +L+ +M G YA L I++ ++ +LLR A S D E
Sbjct: 615 DITLSAELIKKMLSCG-------YAPSLLKDIKSGVCKKALSLLR-AFSGKTSYDYR--E 664
Query: 563 ALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKE 622
L ++ + + A+ LF EM +S+ P EF L+ A+ ++ ++ L +++ +
Sbjct: 665 KLSRNGLSELKLDDAVALFGEMVKSR-PFPSIIEFSKLLSAIAKMNKFDVVISLGEQM-Q 722
Query: 623 GQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYA 676
I + ++ +I+ FC++ + A L +M LG+ PN T S++ GY
Sbjct: 723 NLGIPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYC 776
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 67/300 (22%), Positives = 116/300 (38%), Gaps = 9/300 (3%)
Query: 448 QPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQA 507
QP Y +V + G T + L K E+ L+ +I +D A
Sbjct: 832 QPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGV--LIYNTIIDGLCKYKHMDDA 889
Query: 508 HDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQS 567
+L EM G+R + Y+SL+ R + + LL D I D + AL+ +
Sbjct: 890 LNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDA 949
Query: 568 KIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRID 627
+ + A L+ EM + I S + L+ G H+ AK + E +
Sbjct: 950 FVKEGKLVEAEKLYDEMVKRSIDPS-IVTYSSLINGFCM-HDRLDEAKQMFEFMVSKHCF 1007
Query: 628 CGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTE 687
V +N +I FCK + +++ + + M G + N T++ ++ G G E
Sbjct: 1008 PDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQ-AGDCDMAQE 1066
Query: 688 LWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFIDKYKYRTLF 747
++ EM S ++ LLD + + G +A V ++ KM Y Y +
Sbjct: 1067 IFKEMVSDGVPPNIMTYNTLLDGL----CKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMI 1122
Score = 52.4 bits (124), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 66/296 (22%), Positives = 120/296 (40%), Gaps = 52/296 (17%)
Query: 447 LQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEK---ENLQVSHDDAALGH---VITLCIS 500
+ P + L+ AF++ GK L++AEK E ++ S D + + + + C+
Sbjct: 936 INPDVFTFSALIDAFVKEGK-------LVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMH 988
Query: 501 LGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASC 560
LD+A + + M Y +L+K + + R E + R+ G+ +
Sbjct: 989 -DRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVT 1047
Query: 561 YEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQN---HEAGLMAKLL 617
Y L+Q D A +FKEM +P + L+ G +N +A ++ + L
Sbjct: 1048 YNILIQGLFQAGDCDMAQEIFKEMVSDGVP-PNIMTYNTLLDGLCKNGKLEKAMVVFEYL 1106
Query: 618 Q----------------------EVKEGQRIDCG---------VHDWNNVIHFFCKKRLM 646
Q +V++G + C V +N +I FC+K
Sbjct: 1107 QRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSK 1166
Query: 647 QDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEMKS--FASSTS 700
++A+ K M+ G LPN+ +++++ G + EL EM+S FA S
Sbjct: 1167 EEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREAS-AELIKEMRSCGFAGDAS 1221
Score = 43.9 bits (102), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 42/195 (21%), Positives = 79/195 (40%), Gaps = 2/195 (1%)
Query: 480 ENLQVSHDDAALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRP 539
E L + +D VI + A +L +M G SL+ + NR
Sbjct: 215 EVLGIRNDLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRV 274
Query: 540 REVTALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEM 599
+ +L+ G + D Y A++ S K A FKE++ I R +
Sbjct: 275 SDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGI-RPNVVTYTA 333
Query: 600 LVKGCAQNHEAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSL 659
LV G + A+LL ++ + ++I V ++ ++ F K + +A++ + M +
Sbjct: 334 LVNGLCNSSRWSDAARLLSDMIK-KKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRM 392
Query: 660 GHLPNAQTFHSMVTG 674
P+ T+ S++ G
Sbjct: 393 SIDPDIVTYSSLING 407
>gi|125524465|gb|EAY72579.1| hypothetical protein OsI_00445 [Oryza sativa Indica Group]
Length = 1014
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 59/250 (23%), Positives = 100/250 (40%), Gaps = 19/250 (7%)
Query: 504 LDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEA 563
D A L EM G+ + YA L+ A + + L R GI++ Y +
Sbjct: 354 FDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRDKGIKVTVYPYNS 413
Query: 564 LLQSKIVQKDTPGALHLFKEM-KESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKE 622
L+ Q A L M KE P + + L+ G +N + +L +E+ E
Sbjct: 414 LINGYCKQGSLDRARGLLSGMVKEGLTPTAA--SYSPLIAGLCRNGDLSSAMELHREMAE 471
Query: 623 GQRIDCGVHDWNN-----VIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAA 677
G+ WNN +I+ FCK + M +A + +M +PN TF+ M+ GY
Sbjct: 472 R-----GIA-WNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGYCL 525
Query: 678 IGGKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMF 737
+ G + +L+ +M + D S++ ++ANE VA +E
Sbjct: 526 V-GNIRKAFQLYDQMVEMG----LKPDNYTYRSLISGLCLTSGVSKANEFVADLENSYAV 580
Query: 738 IDKYKYRTLF 747
++ + L
Sbjct: 581 LNNFSLTALL 590
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/221 (22%), Positives = 96/221 (43%), Gaps = 7/221 (3%)
Query: 502 GWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCY 561
G ++ A L D+M G++ + Y SL+ Y + LL G+ A+ Y
Sbjct: 387 GMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASY 446
Query: 562 EALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVK 621
L+ D A+ L +EM E I + + F L+ G ++ + A+L ++
Sbjct: 447 SPLIAGLCRNGDLSSAMELHREMAERGIAWNNYT-FTALINGFCKDKKMDEAARLFDKMI 505
Query: 622 EGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGK 681
+ I V +N +I +C ++ A + +M +G P+ T+ S+++G G
Sbjct: 506 DSNVIPNEV-TFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSG- 563
Query: 682 YTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFA 722
++ E ++++ + + NF L ++LY R G F
Sbjct: 564 VSKANEFVADLEN-SYAVLNNFS---LTALLYGLFREGRFT 600
>gi|449488099|ref|XP_004157939.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g06000-like [Cucumis sativus]
Length = 548
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/194 (23%), Positives = 83/194 (42%), Gaps = 3/194 (1%)
Query: 487 DDAALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALL 546
D + L +++ +G LD A + L+E+H G++ S VY +LL ++ N E L
Sbjct: 143 DSSILELLVSSYARMGKLDSAKNFLNEVHCYGIKVSPFVYNNLLNMLVKQNLVDEAVLLF 202
Query: 547 RDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKE-SKIPRSGHQEFEMLVKGCA 605
R+ D + L++ + A F+ M P + L+ G
Sbjct: 203 REHLEPYFVPDVYSFNILIRGLCRIGEIDKAFEFFQNMGNFGCFP--DIVSYNTLINGFC 260
Query: 606 QNHEAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNA 665
+ +E LL+E + + V + ++I +CK M+ A + M S G PN
Sbjct: 261 RVNEISKGHDLLKEDMLIKGVSPDVITYTSIISGYCKLGDMKAASELFDEMVSSGIKPND 320
Query: 666 QTFHSMVTGYAAIG 679
TF+ ++ G+ +G
Sbjct: 321 FTFNVLIDGFGKVG 334
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 84/202 (41%), Gaps = 9/202 (4%)
Query: 496 TLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQ 555
LC +G D A + D M G+ SS+ L+ +Y + L + GI+
Sbjct: 118 NLC-KVGLNDSAKIVFDCMRSDGILPDSSILELLVSSYARMGKLDSAKNFLNEVHCYGIK 176
Query: 556 LDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAK 615
+ Y LL + Q A+ LF+E E + F +L++G + G + K
Sbjct: 177 VSPFVYNNLLNMLVKQNLVDEAVLLFREHLEPYFVPDVYS-FNILIRGLCR---IGEIDK 232
Query: 616 LLQEVKEGQRIDC--GVHDWNNVIHFFCKKRLMQDAEKALKR-MRSLGHLPNAQTFHSMV 672
+ + C + +N +I+ FC+ + LK M G P+ T+ S++
Sbjct: 233 AFEFFQNMGNFGCFPDIVSYNTLINGFCRVNEISKGHDLLKEDMLIKGVSPDVITYTSII 292
Query: 673 TGYAAIGGKYTEVTELWGEMKS 694
+GY + G +EL+ EM S
Sbjct: 293 SGYCKL-GDMKAASELFDEMVS 313
Score = 47.0 bits (110), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 51/274 (18%), Positives = 109/274 (39%), Gaps = 8/274 (2%)
Query: 454 YIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQAHDLLDE 513
Y L+ F + + H L+K + VS D +I+ LG + A +L DE
Sbjct: 252 YNTLINGFCRVNEISK-GHDLLKEDMLIKGVSPDVITYTSIISGYCKLGDMKAASELFDE 310
Query: 514 MHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQKD 573
M +G++ + + L+ + + R + G D + +L+ + +
Sbjct: 311 MVSSGIKPNDFTFNVLIDGFGKVGNMRSAMVMYEKMLLLGCLPDVVTFTSLIDGYCREGE 370
Query: 574 TPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRIDCGVHDW 633
L L++EMK + + + + +L+ + + L+ +K + + +
Sbjct: 371 VNQGLKLWEEMKVRNLSPNVYT-YAVLINALCKENRIREARNFLRHLKSSEVVP-KPFIY 428
Query: 634 NNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEMK 693
N VI FCK + +A + M+ P+ TF ++ G + G+ E + +M
Sbjct: 429 NPVIDGFCKAGKVDEANFIVAEMQEKKCRPDKITFTILIIG-NCMKGRMVEAISTFYKMI 487
Query: 694 SFASSTSMNFDEELLDSVLYTFVRGGFFARANEV 727
DE ++S++ ++ G A+++
Sbjct: 488 EINCVP----DEITINSLISCLLKAGMPNEASQI 517
>gi|297741319|emb|CBI32450.3| unnamed protein product [Vitis vinifera]
Length = 851
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 92/206 (44%), Gaps = 18/206 (8%)
Query: 502 GWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCY 561
G LD+A + EM GV + Y+SL++ E R E L ++ G+ D Y
Sbjct: 269 GELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRRLTEACDLSQEMLDMGLPPDEFTY 328
Query: 562 EALLQSKIVQKDTPGALHLFKEM-KESKIPRSGHQEFEMLVKGC---AQNHEAG-LMAKL 616
L+ + V+ D ALHL EM + +P + + +L+ G A+ EA L+ KL
Sbjct: 329 TTLINAYCVEGDLNKALHLHDEMIHKGFLPDA--VTYSVLINGLNKQARTREAKRLLFKL 386
Query: 617 LQE--VKEGQRIDCGVHDWNNV--------IHFFCKKRLMQDAEKALKRMRSLGHLPNAQ 666
+ E V D + + +N+ I FC K LM +A++ + M H P
Sbjct: 387 IYEESVPSDVTYDTLIENCSNIEFKSVVALIKGFCMKGLMHEADRVFESMVERNHKPGEA 446
Query: 667 TFHSMVTGYAAIGGKYTEVTELWGEM 692
++ ++ G+ GG + L+ EM
Sbjct: 447 VYNVIIHGHCR-GGNLPKAFNLYKEM 471
Score = 49.3 bits (116), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 45/233 (19%), Positives = 92/233 (39%), Gaps = 4/233 (1%)
Query: 447 LQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQ 506
P E Y L+ + + G + +I AE VS +I L++
Sbjct: 111 FTPDEVTYNTLLNGYCKEGNFHQA--LVIHAEMVRNGVSPSVVTYTALINSMCKARNLNR 168
Query: 507 AHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQ 566
A + D+M + G+R + Y +L+ + E +L + +G Y A +
Sbjct: 169 AMEFFDQMRIRGLRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIH 228
Query: 567 SKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRI 626
V + AL + +EM E + + ++ G + E ++ QE+ E + +
Sbjct: 229 GHCVLERMEEALGVVQEMVEKGLAPD-VVSYSTIISGFCRKGELDRAFQMKQEMVE-KGV 286
Query: 627 DCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIG 679
++++I C+ R + +A + M +G P+ T+ +++ Y G
Sbjct: 287 SPDAVTYSSLIQGLCEMRRLTEACDLSQEMLDMGLPPDEFTYTTLINAYCVEG 339
Score = 48.1 bits (113), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 40/181 (22%), Positives = 75/181 (41%), Gaps = 4/181 (2%)
Query: 500 SLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDAS 559
S+G L + EM G + Y +L+ AY + R E LL+ S G+Q +
Sbjct: 22 SVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGRIDEAFGLLKSMSSKGMQPNLI 81
Query: 560 CYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKG-CAQNHEAGLMAKLLQ 618
Y ++ + A + +EM + L+ G C + + + +
Sbjct: 82 SYNVIINGLCREGSMKEAWEILEEMGYKGFTPD-EVTYNTLLNGYCKEGNFHQALVIHAE 140
Query: 619 EVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAI 678
V+ G + V + +I+ CK R + A + +MR G PN +T+ +++ G++
Sbjct: 141 MVRNG--VSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRPNERTYTTLIDGFSRQ 198
Query: 679 G 679
G
Sbjct: 199 G 199
Score = 43.1 bits (100), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 54/128 (42%), Gaps = 5/128 (3%)
Query: 625 RIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTE 684
R+ V+ +N +I FC +Q M G LPN T+++++ Y +G
Sbjct: 5 RVSPNVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMG----R 60
Query: 685 VTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFIDKYKYR 744
+ E +G +KS SS M + + ++ R G A E++ M D+ Y
Sbjct: 61 IDEAFGLLKSM-SSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYN 119
Query: 745 TLFLKYHK 752
TL Y K
Sbjct: 120 TLLNGYCK 127
>gi|334186712|ref|NP_001190774.1| Pentatricopeptide repeat domain-containing protein [Arabidopsis
thaliana]
gi|223635614|sp|P0C8Q3.1|PP326_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g19890
gi|332658842|gb|AEE84242.1| Pentatricopeptide repeat domain-containing protein [Arabidopsis
thaliana]
Length = 701
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 70/306 (22%), Positives = 133/306 (43%), Gaps = 20/306 (6%)
Query: 444 HGILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGW 503
+G LQ ++ +++ F E G+ E ++ + + L S + V+ + + LG
Sbjct: 140 NGNLQKAHEVMRCMLRNFSEIGRLNEAVGMVMDMQNQGLTPS--SITMNCVLEIAVELGL 197
Query: 504 LDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAG-IQLDASC-- 560
++ A ++ DEM + GV SS Y ++ + +E L G I +A+C
Sbjct: 198 IEYAENVFDEMSVRGVVPDSSSYKLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTL 257
Query: 561 -YEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQE 619
AL ++ +V + A+ F++M + + F L+ G + ++L+E
Sbjct: 258 ILTALCENGLVNR----AIWYFRKMIDLGF-KPNLINFTSLIDGLCKKGSIKQAFEMLEE 312
Query: 620 -VKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKA-LKRMRSLGHLPNAQTFHSMVTGYAA 677
V+ G + + V+ +I CK+ + A + LK +RS + PN T+ SM+ GY
Sbjct: 313 MVRNGWKPN--VYTHTALIDGLCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCK 370
Query: 678 IGGKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMF 737
K L+ MK ++N L++ + G F RA E++ +M +
Sbjct: 371 -EDKLNRAEMLFSRMKEQGLFPNVNTYTTLING----HCKAGSFGRAYELMNLMGDEGFM 425
Query: 738 IDKYKY 743
+ Y Y
Sbjct: 426 PNIYTY 431
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/178 (23%), Positives = 76/178 (42%), Gaps = 37/178 (20%)
Query: 502 GWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCY 561
G +A++L++ M G + Y + + + + +R E LL A S G++ D Y
Sbjct: 407 GSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEADGVTY 466
Query: 562 EALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVK 621
L+Q + Q D AL F M ++ G A +
Sbjct: 467 TILIQEQCKQNDINQALAFFCRMNKT-----------------------GFEADM----- 498
Query: 622 EGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIG 679
R++ N +I FC+++ M+++E+ + + SLG +P +T+ SM++ Y G
Sbjct: 499 ---RLN------NILIAAFCRQKKMKESERLFQLVVSLGLIPTKETYTSMISCYCKEG 547
>gi|357517409|ref|XP_003628993.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355523015|gb|AET03469.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 819
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/210 (20%), Positives = 99/210 (47%), Gaps = 7/210 (3%)
Query: 487 DDAALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALL 546
D + +I C G +++A L ++M G + + Y L+K + + +V +L
Sbjct: 521 DGISYNTLIFGCCKSGKIEEAFKLKEKMMKQGFKPDTYTYNFLMKGLADKGKMDDVGRVL 580
Query: 547 RDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQ 606
+A+ G+ + Y +L+ A+ LF ++ +K+ S + + +L+ A
Sbjct: 581 HEAKDHGVVPNIYTYALMLEGYCNADRIDNAVSLFNKLVYNKVELS-YVVYNILI---AA 636
Query: 607 NHEAGLMAKL--LQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPN 664
+ +AG + L++ I + ++++IH C L+++A+ + MR+ G +PN
Sbjct: 637 HSKAGNFTEAFKLRDAMRSSNIHPTIFTYSSIIHGMCCNDLVEEAKGIFEEMRNEGLMPN 696
Query: 665 AQTFHSMVTGYAAIGGKYTEVTELWGEMKS 694
+ +++ GY + G+ ++ + EM S
Sbjct: 697 VFCYTALIGGYCKL-GQMDQIESILQEMTS 725
>gi|357499781|ref|XP_003620179.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495194|gb|AES76397.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 517
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 66/288 (22%), Positives = 124/288 (43%), Gaps = 22/288 (7%)
Query: 389 NSVDLENSGIIENHILSYEDFTKDRKFVALEAEVKRVLQTLLGMLQKQVELITTEHGILQ 448
++VDL N I+EN FT E VK + +L M+ Q GI +
Sbjct: 160 DAVDLFNKMILENINPDVYTFTILVDGFCKEGRVKEA-KNVLAMMMIQ--------GI-K 209
Query: 449 PTEKIYIKLVKAFL---EAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLD 505
P Y L+ + + K K + + + + L VS D + +I + +D
Sbjct: 210 PGVVTYNSLMDGYFLVKQVNKAKSIFNTMAQ-----LGVSPDIQSYSILINGFCKIKMMD 264
Query: 506 QAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALL 565
+A +LL EMH + + Y+SL+ ++ + L+ + G + Y ++L
Sbjct: 265 EAMELLKEMHHKQIIPNVVTYSSLIDGLCKSGKISYALKLVDEMHDRGQPPNIVTYSSIL 324
Query: 566 QSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQE-VKEGQ 624
+ A+ L +MK I + + +L+KG Q+ + K+ ++ + +G
Sbjct: 325 DALCKNHQVDNAIALLTQMKNQGI-QPNMYTYTILIKGLCQSGKLEDARKVFEDLLVKGH 383
Query: 625 RIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMV 672
++ V+ + +I FC K L +A L +M G +PNA+T+ ++
Sbjct: 384 NLN--VYTYTVMIQGFCDKGLFDEALTLLSKMEDNGCIPNAKTYEIII 429
Score = 52.8 bits (125), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 52/251 (20%), Positives = 103/251 (41%), Gaps = 13/251 (5%)
Query: 447 LQPTEKIYIKLVKAFLEAGKTKE----LTHFLIKAEKENLQVSHDDAALGHVITLCISLG 502
+ P + LV F + G+ KE L +I+ K + V+++ G+ + +
Sbjct: 173 INPDVYTFTILVDGFCKEGRVKEAKNVLAMMMIQGIKPGV-VTYNSLMDGYFL-----VK 226
Query: 503 WLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYE 562
+++A + + M GV Y+ L+ + + E LL++ I + Y
Sbjct: 227 QVNKAKSIFNTMAQLGVSPDIQSYSILINGFCKIKMMDEAMELLKEMHHKQIIPNVVTYS 286
Query: 563 ALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKE 622
+L+ AL L EM + P + + ++ +NH+ LL ++K
Sbjct: 287 SLIDGLCKSGKISYALKLVDEMHDRGQPPN-IVTYSSILDALCKNHQVDNAIALLTQMKN 345
Query: 623 GQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKY 682
Q I ++ + +I C+ ++DA K + + GH N T+ M+ G+ G +
Sbjct: 346 -QGIQPNMYTYTILIKGLCQSGKLEDARKVFEDLLVKGHNLNVYTYTVMIQGFCD-KGLF 403
Query: 683 TEVTELWGEMK 693
E L +M+
Sbjct: 404 DEALTLLSKME 414
>gi|357521609|ref|XP_003631093.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355525115|gb|AET05569.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 788
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 60/235 (25%), Positives = 95/235 (40%), Gaps = 7/235 (2%)
Query: 443 EHGILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLG 502
E GIL Y L+ G+ +E+T L K +EN V DD +I G
Sbjct: 223 ERGILLDAVT-YNSLIDGCCSVGRWQEVTQLLTKMVREN--VDPDDYTFNILIDALCKEG 279
Query: 503 WLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYE 562
+ +A +L M G + Y +L++ Y E L G++ D Y
Sbjct: 280 RILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRGLEPDVLNYN 339
Query: 563 ALLQSKIVQKDTPGALHLFKEM-KESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVK 621
L+ K A+ LFKE+ ++ +P + L+ G + + KLL E+
Sbjct: 340 VLIDGYCKTKMVDEAMVLFKELCNKNLVPTIA--SYNSLIDGLCNSGRISHVKKLLDEM- 396
Query: 622 EGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYA 676
G V +N +I CK+ + +A L M G PN T+++M+ GY
Sbjct: 397 HGSAQPPDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYC 451
Score = 49.3 bits (116), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 88/445 (19%), Positives = 165/445 (37%), Gaps = 41/445 (9%)
Query: 255 TFNIALAGCLLFETTRKAEQLLDIMPRIGVKADSNLLIIMAHIYERNGRREELRKLQRHI 314
T+N + GC ++ QLL M R V D I+ + GR E + + +
Sbjct: 232 TYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDALCKEGRILEAQGVLAMM 291
Query: 315 DEAVNLSDIQFRQFYNCLLSCHLKFGDLNSASKMVLEMLQRAKEARNSLAAAMLPFNAVG 374
+ DI YN L+ + +++ A ++ M++R E
Sbjct: 292 SKRGEKPDIVT---YNALMEGYCSRENVHEARELFNRMVKRGLE---------------- 332
Query: 375 VNNRTPSEQNVNCTNSVDLENSGIIENHILSYEDFTKDRKFVALEAEVKRVLQTLL--GM 432
P N N + + E +L E K+ V A ++ L G
Sbjct: 333 -----PDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKN--LVPTIASYNSLIDGLCNSGR 385
Query: 433 LQKQVELITTEHGILQPTEKI-YIKLVKAFLEAGKTKELTHFLIKAEKENLQ---VSHDD 488
+ +L+ HG QP + + Y L+ A + G+ E L+ K+ ++ V+++
Sbjct: 386 ISHVKKLLDEMHGSAQPPDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNA 445
Query: 489 AALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRD 548
G+ + ++ A D+ + M +G+ Y L+ Y + E L ++
Sbjct: 446 MMDGYCLR-----NNVNVAKDIFNRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKE 500
Query: 549 ARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNH 608
R + D + Y +L+ P L EM +S + +L+ +
Sbjct: 501 MRHKNLIPDIASYNSLIDGLCNLGRIPHVQELLDEMCDSG-QSPDVITYNILLDAFCKTQ 559
Query: 609 EAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTF 668
L +++ EG D + + ++ CK ++ AE ALK + G PN QT+
Sbjct: 560 PFDKAISLFRQIVEGIWPD--FYTNHAIVDNLCKGEKLKMAEDALKHLLMHGCSPNVQTY 617
Query: 669 HSMVTGYAAIGGKYTEVTELWGEMK 693
++ G + E L +M+
Sbjct: 618 TILINALCK-DGSFGEAMLLLSKME 641
Score = 42.4 bits (98), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 41/196 (20%), Positives = 82/196 (41%), Gaps = 4/196 (2%)
Query: 497 LCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQL 556
CI+ G + +A D + G Y +L+ + + + LL++ + +Q
Sbjct: 135 FCIN-GMIFKALDFCQNLLAQGYLFDQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQP 193
Query: 557 DASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKL 616
+ Y AL+ AL L ++ E I + L+ GC + +L
Sbjct: 194 NLVMYSALIDGLCKDGFVSDALGLCSQIGERGILLDA-VTYNSLIDGCCSVGRWQEVTQL 252
Query: 617 LQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYA 676
L ++ + +D + +N +I CK+ + +A+ L M G P+ T+++++ GY
Sbjct: 253 LTKMVR-ENVDPDDYTFNILIDALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYC 311
Query: 677 AIGGKYTEVTELWGEM 692
+ + E EL+ M
Sbjct: 312 SRENVH-EARELFNRM 326
>gi|356523400|ref|XP_003530328.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g48810-like [Glycine max]
Length = 664
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 62/300 (20%), Positives = 116/300 (38%), Gaps = 20/300 (6%)
Query: 457 LVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQAHDLLDEMHL 516
L+ G+ E+ F + E V + + VI+ +G ++ A +L +M
Sbjct: 253 LICGLCREGRVGEV--FGLMDEMVGNGVDPNVVSYSSVISWLSDVGEVELALAVLGKMIR 310
Query: 517 AGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQKDTPG 576
G R + ++SL+K Y R E L R G++ + Y LL +
Sbjct: 311 RGCRPNVHTFSSLMKGYFLGGRVGEGVGLWRVMVLEGVRPNVVVYNTLLNGLCCSGNLAE 370
Query: 577 ALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKE--GQRIDCGVHD-- 632
A+ + M++ R + LV G + A LQ E + ++CGV
Sbjct: 371 AVDVCGRMEKDCFCRPNVTTYSTLVHGFVK-------AGDLQGASEVWNKMVNCGVRPNV 423
Query: 633 --WNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWG 690
+ +++ CK + A + + M + G P TF++ + G GG+ +
Sbjct: 424 VVYTSMVDVLCKNSMFDQAYRLIDNMATDGCPPTVVTFNTFIKGLCC-GGRVLWAMRVVD 482
Query: 691 EMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFIDKYKYRTLFLKY 750
+M+ + ELLD + A E++ +EE K+ ++ Y T+ +
Sbjct: 483 QMQRYGCLPDTRTYNELLDGLFSV----NELKEACELIRELEERKVELNLVTYNTVMYGF 538
>gi|255764587|gb|ACU33853.1| PPR1 protein [Capsicum annuum]
Length = 577
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 70/325 (21%), Positives = 138/325 (42%), Gaps = 53/325 (16%)
Query: 447 LQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQ 506
+ P Y L+ + G+ +++ L +E NL ++ + +I G ++
Sbjct: 234 IPPNIFTYNSLIDGLCKLGQWEKVKTLL--SEMVNLNINPNVHTFSILIDGLCKEGKVED 291
Query: 507 AHDLLDEMHLAGVRASSSVYASLLKAYI---EANRPREVTALLRDARSAGIQLDASCYEA 563
A +++ M GV Y++++ Y + +R R V +LRD GI+ + Y
Sbjct: 292 ADEVMRHMIEKGVEPDIITYSAIMDGYCLRGQVDRARRVFNVLRDK---GIKPNIFSYSI 348
Query: 564 LLQSKIVQKDTPGALHLFKEMKES-----------------KIPRSGHQE---FEMLVKG 603
L+ +K+ A+ LF E+ + ++ R G + EML G
Sbjct: 349 LINGYCKKKNLAKAMQLFGEISQKGLKPDTVTYSTILHGLIEVGRIGDAKKIFDEMLRVG 408
Query: 604 -----CAQN------HEAGLM--AKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAE 650
C + + GL+ A LL E R D + + VI+ CK +++A
Sbjct: 409 PTPDICLHSTLLFGYFKYGLVEEAMLLFSKLERNREDTNISFYTVVINGLCKNDRVREAH 468
Query: 651 KALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEMKSFASSTSMNFDEELLDS 710
+++ S+G +P+ +T++ M+TG+ G + EV + +M+ ++
Sbjct: 469 AIFEKLPSIGLIPDVRTYNVMITGFCR-EGLFDEVKGILRKMEDNGCPA---------NN 518
Query: 711 VLYTFVRGGFF--ARANEVVAMMEE 733
+ Y + GFF + +E+V+ M+E
Sbjct: 519 ITYNVIMQGFFRSNKISEIVSFMKE 543
Score = 47.0 bits (110), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 33/155 (21%), Positives = 71/155 (45%), Gaps = 2/155 (1%)
Query: 525 VYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEM 584
+Y +++ + + +LLR + D Y ++ + + A++L EM
Sbjct: 170 MYGTVMNGLSKRGHTEKTLSLLRIMEQGNTKPDVRTYSIVIDALCKDINLDAAINLLNEM 229
Query: 585 KESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKR 644
K+ IP + + L+ G + + + LL E+ I+ VH ++ +I CK+
Sbjct: 230 KQKNIPPNIFT-YNSLIDGLCKLGQWEKVKTLLSEMVN-LNINPNVHTFSILIDGLCKEG 287
Query: 645 LMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIG 679
++DA++ ++ M G P+ T+ +++ GY G
Sbjct: 288 KVEDADEVMRHMIEKGVEPDIITYSAIMDGYCLRG 322
>gi|224125420|ref|XP_002329801.1| predicted protein [Populus trichocarpa]
gi|222870863|gb|EEF07994.1| predicted protein [Populus trichocarpa]
Length = 478
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 59/246 (23%), Positives = 106/246 (43%), Gaps = 6/246 (2%)
Query: 448 QPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVI-TLCISLGWLDQ 506
+PT+K YI + +E + K F K +E + V +L +I LC + G +D
Sbjct: 117 KPTDKSYISVFAILVEENQLKVAMSFY-KYMRE-MGVRQSVVSLNVLIKALCKNSGTIDA 174
Query: 507 AHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQ 566
A ++ EM G S Y +L+ + + E L ++ + G Y L+
Sbjct: 175 AFEIFREMPKRGCDPDSYTYGTLINGLCKLGKTFEAKELFKEMDTKGCSPSVVTYSCLMH 234
Query: 567 SKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRI 626
+ A+ LF +MK+ I + + L+ G +N L A L E+ +R
Sbjct: 235 GLCQAGNVDEAMGLFDKMKKKAIEPNVFT-YSSLMDGLCKNG-GSLEAMELLEMMVRKRH 292
Query: 627 DCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVT 686
+ ++ +I+ CK+ + +A + L RM+ G P+A + ++ G+ I K+ E
Sbjct: 293 KPNMVTYSTLINGLCKEGKLAEAVETLDRMKLQGLKPDAGLYGKIINGFCNI-RKFQEAA 351
Query: 687 ELWGEM 692
EM
Sbjct: 352 TYLDEM 357
>gi|6692112|gb|AAF24577.1|AC007764_19 F22C12.14 [Arabidopsis thaliana]
Length = 661
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/252 (21%), Positives = 103/252 (40%), Gaps = 11/252 (4%)
Query: 444 HGILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGW 503
H + P Y ++ F + + + H +L S D +I +
Sbjct: 389 HRCIFPDTVTYNSMIYGFCKHNRFDDAKHMF------DLMASPDVVTFNTIIDVYCRAKR 442
Query: 504 LDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEA 563
+D+ LL E+ G+ A+++ Y +L+ + E + L ++ S G+ D
Sbjct: 443 VDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNI 502
Query: 564 LLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVK-E 622
LL + AL LF+ ++ SKI + +++ G + + L +
Sbjct: 503 LLYGFCENEKLEEALELFEVIQMSKIDLDT-VAYNIIIHGMCKGSKVDEAWDLFCSLPIH 561
Query: 623 GQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKY 682
G D V +N +I FC K + DA +M+ GH P+ T+++++ G G+
Sbjct: 562 GVEPD--VQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLK-AGEI 618
Query: 683 TEVTELWGEMKS 694
+ EL EM+S
Sbjct: 619 DKSIELISEMRS 630
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 51/234 (21%), Positives = 96/234 (41%), Gaps = 13/234 (5%)
Query: 501 LGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASC 560
G++ + L D+M G+ + +L+ R E AL+ G+ +D
Sbjct: 199 FGYMVETGSLFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVT 258
Query: 561 YEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEV 620
Y ++ DT AL+L +M+E+ I ++ + C H + + +
Sbjct: 259 YGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEML 318
Query: 621 KEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGG 680
++G I V +N +I FC DA++ L+ M P+ TF+++++ + G
Sbjct: 319 EKG--IAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISA-SVKEG 375
Query: 681 KYTEVTELWGEMKS---FASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMM 731
K E +L EM F + + N S++Y F + F A + +M
Sbjct: 376 KLFEAEKLCDEMLHRCIFPDTVTYN-------SMIYGFCKHNRFDDAKHMFDLM 422
>gi|224123734|ref|XP_002330195.1| predicted protein [Populus trichocarpa]
gi|222871651|gb|EEF08782.1| predicted protein [Populus trichocarpa]
Length = 529
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 88/186 (47%), Gaps = 6/186 (3%)
Query: 497 LCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREV---TALLRDARSAG 553
LC +G L++A D++++M + GV + Y +L+ Y + R ++ A+L++ + G
Sbjct: 165 LC-KVGKLNRAGDVIEDMKVWGVSPNVITYNTLIDGYCKMGRIGKMYKADAILKEMVAKG 223
Query: 554 IQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLM 613
I + Y L+ ++ GA+ +F EM+ + R + +L+ G + +
Sbjct: 224 ICPNEVTYNILIDGFCKDENVSGAMRVFGEMQRQGL-RPNVVTYNILINGLCSDGKVD-E 281
Query: 614 AKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVT 673
A L++ ++ V N +I+ FCK + + +A M G PNA T+ +++
Sbjct: 282 AVALRDQMVSSDLEPNVVTHNVLINGFCKNKTVNEAINLFNDMEKQGVDPNAMTYTTLID 341
Query: 674 GYAAIG 679
Y G
Sbjct: 342 AYCKDG 347
Score = 48.1 bits (113), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 52/225 (23%), Positives = 91/225 (40%), Gaps = 8/225 (3%)
Query: 447 LQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQ 506
L+P + L+ F + E + EK+ V + +I G ++
Sbjct: 294 LEPNVVTHNVLINGFCKNKTVNEAINLFNDMEKQG--VDPNAMTYTTLIDAYCKDGRMED 351
Query: 507 AHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQ 566
A L + M G+ S Y L+ + +L+ + S + D Y L+
Sbjct: 352 AFALYNMMIDRGIFPEVSTYNCLIAGLCRKGDVKAARSLMNEMVSKKLSADVVTYNILID 411
Query: 567 SKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKG-CAQ-NHEAGLMAKLLQEVKEGQ 624
S + ++ A+ L EM E + S H + L+ G C + N A L+ + E ++G+
Sbjct: 412 SLCKKGESRKAVKLLDEMFEKGLNPS-HVTYNTLMDGYCREGNLRAALIVRTRME-RKGK 469
Query: 625 RIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFH 669
+ + H N +I FC K ++DA L M G +PN T+
Sbjct: 470 QANVVTH--NVLIKGFCLKGRLEDANGLLNEMLERGLVPNRTTYE 512
Score = 44.7 bits (104), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 42/184 (22%), Positives = 76/184 (41%), Gaps = 5/184 (2%)
Query: 497 LCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQL 556
LC S G +D+A L D+M + + + + L+ + + E L D G+
Sbjct: 273 LC-SDGKVDEAVALRDQMVSSDLEPNVVTHNVLINGFCKNKTVNEAINLFNDMEKQGVDP 331
Query: 557 DASCYEALLQSKIVQKDTPGALHLFKEMKESKI-PRSGHQEFEMLVKGCAQNHEAGLMAK 615
+A Y L+ + A L+ M + I P + L+ G + +
Sbjct: 332 NAMTYTTLIDAYCKDGRMEDAFALYNMMIDRGIFPEV--STYNCLIAGLCRKGDVKAARS 389
Query: 616 LLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGY 675
L+ E+ +++ V +N +I CKK + A K L M G P+ T+++++ GY
Sbjct: 390 LMNEMVS-KKLSADVVTYNILIDSLCKKGESRKAVKLLDEMFEKGLNPSHVTYNTLMDGY 448
Query: 676 AAIG 679
G
Sbjct: 449 CREG 452
Score = 42.0 bits (97), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 50/218 (22%), Positives = 93/218 (42%), Gaps = 25/218 (11%)
Query: 528 SLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKES 587
S L +++ + V+A+ +G D+ C ++L +V L + + +
Sbjct: 53 SFLDKFVKYEKDYSVSAIFHAISMSG---DSFCVNSILADMLVLAFVRN-LKILRGFEAF 108
Query: 588 KIPRSGHQEFEM-------LVKGCAQNHEAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFF 640
K R+G F++ L+ G + E G M + +E+ + ++I+ V +N V++
Sbjct: 109 K--RAGDYGFKLSLISCNPLLSGLVKESENGDMEFVYREMIK-RKIELNVISFNIVVNGL 165
Query: 641 CKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIG--GKYTEVTELWGEMKSFASS 698
CK + A ++ M+ G PN T+++++ GY +G GK + + EM A
Sbjct: 166 CKVGKLNRAGDVIEDMKVWGVSPNVITYNTLIDGYCKMGRIGKMYKADAILKEM--VAKG 223
Query: 699 TSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKM 736
N V Y + GF N AM G+M
Sbjct: 224 ICPN-------EVTYNILIDGFCKDENVSGAMRVFGEM 254
Score = 41.6 bits (96), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 70/150 (46%), Gaps = 17/150 (11%)
Query: 227 IGYLFQDGRVDPRKKCNAPLIA--MKPNTNTFNIALAGCLLFETTRKAEQLLDIMPRIGV 284
I L DG+VD +++ ++PN T N+ + G +T +A L + M + GV
Sbjct: 270 INGLCSDGKVDEAVALRDQMVSSDLEPNVVTHNVLINGFCKNKTVNEAINLFNDMEKQGV 329
Query: 285 KADSNLLIIMAHIYERNGRREELRKL-QRHIDEAVNLSDIQFRQF--YNCLLSCHLKFGD 341
++ + Y ++GR E+ L ID + F + YNCL++ + GD
Sbjct: 330 DPNAMTYTTLIDAYCKDGRMEDAFALYNMMIDRGI------FPEVSTYNCLIAGLCRKGD 383
Query: 342 LNSASKMVLEMLQRAKEARNSLAAAMLPFN 371
+ +A ++ EM+ + L+A ++ +N
Sbjct: 384 VKAARSLMNEMVSK------KLSADVVTYN 407
>gi|218199706|gb|EEC82133.1| hypothetical protein OsI_26175 [Oryza sativa Indica Group]
Length = 799
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 63/294 (21%), Positives = 118/294 (40%), Gaps = 12/294 (4%)
Query: 454 YIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQAHDLLDE 513
Y L+KA AG+ K+ + + D G ++ +L L+ A LL E
Sbjct: 256 YNILLKALCTAGRIKDAHQLF-----DEMASPPDVVTYGIMVHGYCTLSELETAIKLLSE 310
Query: 514 MHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQKD 573
M G+ + Y S++ + + + ++ D G+ LDA+ + ++ + D
Sbjct: 311 MAARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGD 370
Query: 574 TPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRIDCGVHDW 633
A + F EM++ + G + L+ G + E ++LQE+ E + +D +
Sbjct: 371 LAAARNWFDEMQKRGLAADG-VTYTALINGLCRAGELKEAERVLQEM-EDKGLDVDAVTY 428
Query: 634 NNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEMK 693
+I +CK M +A +M PN T+ ++ G G EL EM
Sbjct: 429 TVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCK-QGDVCAANELLHEM- 486
Query: 694 SFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFIDKYKYRTLF 747
S + + +S++ + G +A + M+E + D Y Y T+
Sbjct: 487 ---CSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTII 537
Score = 45.1 bits (105), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 47/220 (21%), Positives = 94/220 (42%), Gaps = 10/220 (4%)
Query: 454 YIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQAHDLLDE 513
Y L+ +AG ++ +I ++ L+ D +I LD+AH LL E
Sbjct: 498 YNSLINGLCKAGNLEQAMRTMIDMDEAGLK--PDVYTYTTIIGALCQSKELDRAHSLLQE 555
Query: 514 MHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQKD 573
M G++ + Y L+ + + R LL I + + Y +L++ ++K+
Sbjct: 556 MLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKN 615
Query: 574 TPGALHLFKEMKESKIPRSGHQEFEMLVKG-C-AQNHEAGLMAKLLQEVKEGQRIDCGVH 631
++K M ++ + +L+KG C A+N + L + +++G R+
Sbjct: 616 MKSTTEIYKGMLSQEV-VPNENTYNILIKGHCKARNMKEALYFH-SEMIEKGFRLTAS-- 671
Query: 632 DWNNVIHFFCKKRLMQDAEKALKRMRS--LGHLPNAQTFH 669
+N +I KK+ +A + ++MR L P+ F+
Sbjct: 672 SYNALIRLLNKKKKFTEARRLFEKMRKDRLTAEPDVYNFY 711
Score = 43.9 bits (102), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 48/224 (21%), Positives = 94/224 (41%), Gaps = 6/224 (2%)
Query: 454 YIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQAHDLLDE 513
Y L+ + + GK E FL+ + +V+ + + G + A++LL E
Sbjct: 428 YTVLIDGYCKVGKMTEA--FLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHE 485
Query: 514 MHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQKD 573
M G+ + Y SL+ +A + + D AG++ D Y ++ + K+
Sbjct: 486 MCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKE 545
Query: 574 TPGALHLFKEMKESKIPRSGHQEFEMLVKG-CAQNHEAGLMAKLLQEVKEGQRIDCGVHD 632
A L +EM + I + + +L+ G C G K L E + I
Sbjct: 546 LDRAHSLLQEMLDKGI-KPTIVTYNVLMNGFCMSGRVEG--GKRLLEWMLEKNIHPNTTT 602
Query: 633 WNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYA 676
+N+++ +C ++ M+ + K M S +PN T++ ++ G+
Sbjct: 603 YNSLMKQYCIEKNMKSTTEIYKGMLSQEVVPNENTYNILIKGHC 646
>gi|255541015|ref|XP_002511572.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223550687|gb|EEF52174.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 735
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 83/175 (47%), Gaps = 10/175 (5%)
Query: 506 QAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALL 565
+A + L +M G+ Y +++ Y + + ++ + +L+DA+ G D Y +L+
Sbjct: 276 EAENYLHKMVNKGLEPDDFTYNTIIYGYSKVGKIQDASRILKDAKFKGFVPDEFTYCSLI 335
Query: 566 QSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEV----K 621
D AL LF+E K + + L+KG +Q GL+ K LQ + K
Sbjct: 336 IGVCQDGDIDHALALFEE-ALGKGLKPSIVLYNTLIKGLSQQ---GLVLKALQLMNDMSK 391
Query: 622 EGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYA 676
EG D + +N VI+ CK + DA L + G+LP+ TF++++ GY
Sbjct: 392 EGMSPD--IWTYNLVINGLCKMGCVSDANNLLNAAIAKGYLPDIFTFNTLIDGYC 444
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 55/302 (18%), Positives = 114/302 (37%), Gaps = 45/302 (14%)
Query: 451 EKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQAHDL 510
E +Y+ ++ + GK +E + + N + S + ++ + + G+ +QAH +
Sbjct: 76 EGVYVSAMRNYGRKGKVQEAVDVFERMDFYNCEPSI--FSYNAIMNILVEYGYFNQAHKV 133
Query: 511 LDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIV 570
M G+ + +K++ RP LL + S G +L+A Y ++
Sbjct: 134 YLRMKHEGIAPDVCTFTIRIKSFCRTKRPLAALRLLNNMPSQGCELNAVVYCTVISGFYE 193
Query: 571 QKDTPGALHLFKEMKESKI-PRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRIDCG 629
+ A LF +M I P
Sbjct: 194 ENYQVEAYELFNKMLRLGIFPH-------------------------------------- 215
Query: 630 VHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIG---GKYTEVT 686
+ +N ++H CKK +Q+ EK L ++ G PN TF+ + G G G ++V
Sbjct: 216 IATFNKLMHILCKKGHLQEGEKLLNKVLKNGVCPNLFTFNIFIQGLCRKGVLEGANSKVV 275
Query: 687 ELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFIDKYKYRTL 746
E + + + D+ ++++Y + + G A+ ++ + D++ Y +L
Sbjct: 276 EAENYLHKMVNK-GLEPDDFTYNTIIYGYSKVGKIQDASRILKDAKFKGFVPDEFTYCSL 334
Query: 747 FL 748
+
Sbjct: 335 II 336
>gi|449522636|ref|XP_004168332.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g09680-like [Cucumis sativus]
Length = 590
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/196 (23%), Positives = 93/196 (47%), Gaps = 6/196 (3%)
Query: 497 LCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQL 556
LC +G +++A L+DEM + G++ Y +L+ Y + + + G+ L
Sbjct: 373 LC-KVGDVNKARKLVDEMKMVGMKPDKITYTTLIDGYCKEGDLESAMEIRKGMNEEGVVL 431
Query: 557 DASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKL 616
D + AL+ A +EM E+ + + + M++ G + + KL
Sbjct: 432 DNVAFTALISGFCRDGRVRDAERTLREMVEAGM-KPDDATYTMVIDGYCKKGNVKMGFKL 490
Query: 617 LQEVK-EGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGY 675
L+E++ G + GV +N +++ CK+ M++A L+ M +LG P+ T++ ++ G+
Sbjct: 491 LKEMQINGHKP--GVITYNVLMNGLCKQGQMKNANMLLEAMLNLGVTPDDITYNILLEGH 548
Query: 676 AAIGGKYTEVTELWGE 691
GK ++ +L E
Sbjct: 549 CK-NGKAEDLLKLRNE 563
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 55/236 (23%), Positives = 95/236 (40%), Gaps = 10/236 (4%)
Query: 447 LQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQ 506
L+PT + L+ ++ E F +K E ++ D +I G LD
Sbjct: 254 LRPTTVSFNTLINGLCKSRNLDE--GFRLKKTMEENRIYPDVFTYSVLIHGLCKEGRLDV 311
Query: 507 AHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQ 566
A L DEM G+R + + +L+ + R + G++ D Y LL
Sbjct: 312 AEQLFDEMQQRGLRPNGITFTALIDGQYRSRRMDSAMNTYHQMLTMGVKPDLVMYNTLLN 371
Query: 567 SKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRI 626
D A L EMK + + + L+ G + E L + + E+++G
Sbjct: 372 GLCKVGDVNKARKLVDEMKMVGM-KPDKITYTTLIDGYCK--EGDLESAM--EIRKGMNE 426
Query: 627 DCGVHD---WNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIG 679
+ V D + +I FC+ ++DAE+ L+ M G P+ T+ ++ GY G
Sbjct: 427 EGVVLDNVAFTALISGFCRDGRVRDAERTLREMVEAGMKPDDATYTMVIDGYCKKG 482
>gi|449439615|ref|XP_004137581.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g74580-like [Cucumis sativus]
Length = 857
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 57/264 (21%), Positives = 106/264 (40%), Gaps = 39/264 (14%)
Query: 451 EKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQAHDL 510
E +YI +++ + GK +E + + + + + S + ++ + + G+ QAH +
Sbjct: 76 EGVYIGIMRDYGRKGKVQEAVNVFERMDFYDCEPSVQ--SYNAIMNILVEYGYFSQAHKV 133
Query: 511 LDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIV 570
M G+ + +K++ RP LL + G + +A Y A++
Sbjct: 134 YMRMKDIGIYPDVYTHTIRMKSFCITGRPTAALRLLNNMPGQGCEFNAVSYCAVISGFYK 193
Query: 571 QKDTPGALHLFKEM-KESKIP--------------RSGHQE------------------- 596
+ A HLF EM K+ P + QE
Sbjct: 194 ENCQIEAYHLFDEMLKQGICPDILTFNKLIHVLCKKGNVQESEKLFSKVMKRGVCPNLFT 253
Query: 597 FEMLVKGCAQNHEAGLMAKLLQE-VKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKR 655
F + ++G + A+LL+ V EG D V +N +I FCK + +AE L +
Sbjct: 254 FNIFIQGLCRKGAIDEAARLLESIVSEGLTPD--VISYNTLICGFCKHSKLVEAECYLHK 311
Query: 656 MRSLGHLPNAQTFHSMVTGYAAIG 679
M + G PN T+++++ G+ G
Sbjct: 312 MVNSGVEPNEFTYNTIINGFCKAG 335
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 78/175 (44%), Gaps = 6/175 (3%)
Query: 504 LDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEA 563
L +A L +M +GV + Y +++ + +A + +LRDA G D Y +
Sbjct: 302 LVEAECYLHKMVNSGVEPNEFTYNTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSS 361
Query: 564 LLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEG 623
L+ D A+ +F E E S + LVKG ++ GL+ + LQ +K+
Sbjct: 362 LINGLCNDGDMNRAMAVFYEAMEKGFKHSIIL-YNTLVKGLSKQ---GLVLQALQLMKDM 417
Query: 624 QRIDCGVHDW--NNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYA 676
C W N V++ CK + DA L + G +P+ TF++++ GY
Sbjct: 418 MEHGCSPDIWTYNLVVNGLCKMGCLSDANGILNDAIAKGCIPDIFTFNTLIDGYC 472
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/176 (23%), Positives = 71/176 (40%), Gaps = 1/176 (0%)
Query: 504 LDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEA 563
+D+A ++LD M G+ Y +LL +A + V + G + Y
Sbjct: 477 MDKAIEILDTMLSHGITPDVITYNTLLNGLCKARKLDNVVDTFKAMLEKGCTPNIITYNI 536
Query: 564 LLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEG 623
L++S + A+ LFKEMK + L+ G N E +L +++
Sbjct: 537 LIESFCKDRKVSEAMELFKEMKTRGLT-PDIVTLCTLICGLCSNGELDKAYELFVTIEKE 595
Query: 624 QRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIG 679
+ +N +I+ FC+K + AEK +M P+ T+ M+ Y G
Sbjct: 596 YKFSYSTAIFNIMINAFCEKLNVSMAEKLFHKMGGSDCAPDNYTYRVMIDSYCKTG 651
>gi|242071495|ref|XP_002451024.1| hypothetical protein SORBIDRAFT_05g022840 [Sorghum bicolor]
gi|241936867|gb|EES10012.1| hypothetical protein SORBIDRAFT_05g022840 [Sorghum bicolor]
Length = 813
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 95/429 (22%), Positives = 177/429 (41%), Gaps = 50/429 (11%)
Query: 265 LFETTRKAEQL---LDIMPRIGVKAD--SNLLIIMAHIYER-NGRREELRKLQRHIDEAV 318
L E R AE L L MP +G D S +++ + +R +G+ +EL ++ AV
Sbjct: 153 LCEAKRTAEALDILLHRMPHLGCVPDVFSYCIVLKSLCSDRKSGQADELLRMMAE-GGAV 211
Query: 319 NLSDIQFRQFYNCLLSCHLKFGDLNSASKMVLEMLQRAKEARNSLAAAMLPFNAVGVNNR 378
L + YN ++ K GD+N A + EM+QR ++ + +N V N
Sbjct: 212 CLPN---AVAYNTVIDGFFKEGDVNKACDLFNEMVQRG------ISPDLSTYNCV--VNA 260
Query: 379 TPSEQNVNCTNSV--DLENSGIIENHILSYEDFTKDRKFVALEAEVKRVLQTLLGMLQKQ 436
+ ++ ++ + + G++ ++ +Y E RV + +
Sbjct: 261 LCKARAMDKAEAILRQMVDKGVLPDN-WTYNSLIYGYSSTGQWKEAVRVSKKM------- 312
Query: 437 VELITTEHGILQPTEKIYIKLVKAFLEAGKTKE----LTHFLIKAEKENLQVSHDDAALG 492
T GIL P L+ + + GK K+ +K +K ++ S+ G
Sbjct: 313 -----TSQGIL-PDVVTLNSLMASLCKHGKIKDARDVFDSMAMKGQKTDI-FSYKIMLNG 365
Query: 493 HVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSA 552
+ + G L +L + M G+ S ++ L+KAY + T + + R
Sbjct: 366 YA-----TKGCLVDLTELFNLMLSDGIAPDSHIFNVLIKAYAKCGMLDRATIIFNEMREQ 420
Query: 553 GIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGL 612
G++ D Y ++ + A+ F +M + + S + L++G H L
Sbjct: 421 GVEPDVVTYSTVIAALCRIGKMDDAVEKFNQMIDQGVAPS-ISTYHFLIQGFC-THGDLL 478
Query: 613 MAK--LLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHS 670
AK +LQ + +G R D G +N +I+ CK + DA+ S+G PN +++
Sbjct: 479 KAKDLVLQMMNKGMRPDIGC--FNFIINNLCKLGRVMDAQNIFDFTISIGLHPNVMVYNT 536
Query: 671 MVTGYAAIG 679
++ GY +G
Sbjct: 537 LMDGYCLVG 545
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/236 (23%), Positives = 102/236 (43%), Gaps = 10/236 (4%)
Query: 518 GVRASSSVYASLLKAYIEANRPRE-VTALLRDARSAGIQLDASCYEALLQSKIVQKDTPG 576
G+ + + ++LL+ EA R E + LL G D Y +L+S + +
Sbjct: 138 GLGIDTIMISNLLRGLCEAKRTAEALDILLHRMPHLGCVPDVFSYCIVLKSLCSDRKSGQ 197
Query: 577 ALHLFKEMKES-KIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQE-VKEGQRIDCGVHDWN 634
A L + M E + + ++ G + + L E V+ G D + +N
Sbjct: 198 ADELLRMMAEGGAVCLPNAVAYNTVIDGFFKEGDVNKACDLFNEMVQRGISPD--LSTYN 255
Query: 635 NVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEMKS 694
V++ CK R M AE L++M G LP+ T++S++ GY++ G++ E + +M
Sbjct: 256 CVVNALCKARAMDKAEAILRQMVDKGVLPDNWTYNSLIYGYSST-GQWKEAVRVSKKM-- 312
Query: 695 FASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFIDKYKYRTLFLKY 750
+S + D L+S++ + + G A +V M D + Y+ + Y
Sbjct: 313 --TSQGILPDVVTLNSLMASLCKHGKIKDARDVFDSMAMKGQKTDIFSYKIMLNGY 366
Score = 46.6 bits (109), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 49/239 (20%), Positives = 101/239 (42%), Gaps = 6/239 (2%)
Query: 501 LGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASC 560
+G ++ A + D M AG++ + VY +L+ Y + R E +L R+ GI+ +
Sbjct: 544 VGKMENALRVFDVMVSAGIQPNVVVYGTLVNGYCKVGRIDEGLSLFREILHKGIKPSTTL 603
Query: 561 YEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEV 620
Y +L T A F EM ES I + + +++ G +N + L +E+
Sbjct: 604 YNIILHGLFQAGRTVPAKVKFHEMTESGIAMDRYT-YSIVLGGLFKNSCSDEAILLFKEL 662
Query: 621 KEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGG 680
+ + N +I + R +++A+ + G +P+ T+ M+T G
Sbjct: 663 -HAMNVKIDITTLNIMIAGMFQIRRVEEAKDLFASISRSGLVPSVVTYSIMMTNLIK-EG 720
Query: 681 KYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFID 739
E +++ M++ + +LL+ V+ + RA ++ ++E +D
Sbjct: 721 LVEEADDMFSSMENAGCEQP---NSQLLNHVVRELLEKREIVRAGTYLSKIDERSFSLD 776
Score = 45.1 bits (105), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 109/598 (18%), Positives = 219/598 (36%), Gaps = 93/598 (15%)
Query: 97 IENAINEHRYGDAWKLYEQHMQMDGFPRKTLVNKILTSFVESLDSKWLEKAYGLVEQAFE 156
I+ E A L+ + +Q P + N ++ + ++ + ++KA ++ Q +
Sbjct: 223 IDGFFKEGDVNKACDLFNEMVQRGISPDLSTYNCVVNALCKA---RAMDKAEAILRQMVD 279
Query: 157 EGKQILLEKEPLIYLSLGLSKCGLPVPASTILRKLVATEQYPPVTAWSAILAH------- 209
+G +L + L G S G A + +K+ + P V ++++A
Sbjct: 280 KG--VLPDNWTYNSLIYGYSSTGQWKEAVRVSKKMTSQGILPDVVTLNSLMASLCKHGKI 337
Query: 210 ---------MSLTAPGAYLAAELILEIGYLFQDGRVDPRKKCNAPLI-AMKPNTNTFNI- 258
M++ + + I+ GY + VD + N L + P+++ FN+
Sbjct: 338 KDARDVFDSMAMKGQKTDIFSYKIMLNGYATKGCLVDLTELFNLMLSDGIAPDSHIFNVL 397
Query: 259 --ALAGCLLFETTRKAEQLLDIMPRIGVKADSNLLIIMAHIYERNGRREE-LRKLQRHID 315
A A C + + +A + + M GV+ D + R G+ ++ + K + ID
Sbjct: 398 IKAYAKCGMLD---RATIIFNEMREQGVEPDVVTYSTVIAALCRIGKMDDAVEKFNQMID 454
Query: 316 EAVNLSDIQFRQFYNCLLSCHLKFGDLNSASKMVLEMLQRAKEARNSLAAAMLPFNAVGV 375
+ V S Y+ L+ GDL A +VL+M+ K R + FN + +
Sbjct: 455 QGVAPS----ISTYHFLIQGFCTHGDLLKAKDLVLQMMN--KGMRPDIGC----FNFI-I 503
Query: 376 NNRTPSEQNVNCTNSVDLENSGIIENHILSYEDFTKDRKFVALEAEVKRVLQTLLGMLQK 435
NN + ++ N D S + +++ Y V RV ++
Sbjct: 504 NNLCKLGRVMDAQNIFDFTISIGLHPNVMVYNTLMDGYCLVGKMENALRVFDVMV----- 558
Query: 436 QVELITTEHGILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVI 495
GI QP +Y LV + + G+
Sbjct: 559 -------SAGI-QPNVVVYGTLVNGYCKVGR----------------------------- 581
Query: 496 TLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQ 555
+D+ L E+ G++ S+++Y +L +A R + +GI
Sbjct: 582 --------IDEGLSLFREILHKGIKPSTTLYNIILHGLFQAGRTVPAKVKFHEMTESGIA 633
Query: 556 LDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAK 615
+D Y +L + A+ LFKE+ + + +++ G Q
Sbjct: 634 MDRYTYSIVLGGLFKNSCSDEAILLFKELHAMNV-KIDITTLNIMIAGMFQIRRVEEAKD 692
Query: 616 LLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLG-HLPNAQTFHSMV 672
L + + V ++ ++ K+ L+++A+ M + G PN+Q + +V
Sbjct: 693 LFASISRSGLVP-SVVTYSIMMTNLIKEGLVEEADDMFSSMENAGCEQPNSQLLNHVV 749
Score = 39.7 bits (91), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 54/276 (19%), Positives = 97/276 (35%), Gaps = 55/276 (19%)
Query: 502 GWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCY 561
G +++A DL +EM G+ S Y ++ A +A + A+LR G+ D Y
Sbjct: 230 GDVNKACDLFNEMVQRGISPDLSTYNCVVNALCKARAMDKAEAILRQMVDKGVLPDNWTY 289
Query: 562 EALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVK 621
+L+ A+ + K+M
Sbjct: 290 NSLIYGYSSTGQWKEAVRVSKKMTS----------------------------------- 314
Query: 622 EGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGK 681
Q I V N+++ CK ++DA M G + ++ M+ GYA G
Sbjct: 315 --QGILPDVVTLNSLMASLCKHGKIKDARDVFDSMAMKGQKTDIFSYKIMLNGYAT-KGC 371
Query: 682 YTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFIDKY 741
++TEL+ M S + D + + ++ + + G RA + M E + D
Sbjct: 372 LVDLTELFNLML----SDGIAPDSHIFNVLIKAYAKCGMLDRATIIFNEMREQGVEPDVV 427
Query: 742 KYRTLFL-------------KYHKTLYKGKTPKFQT 764
Y T+ K+++ + +G P T
Sbjct: 428 TYSTVIAALCRIGKMDDAVEKFNQMIDQGVAPSIST 463
>gi|356566887|ref|XP_003551657.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g62910-like [Glycine max]
Length = 525
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 89/223 (39%), Gaps = 5/223 (2%)
Query: 457 LVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQAHDLLDEMHL 516
L+K G+T E + A + S D+ G +I +G A +LL +M
Sbjct: 132 LMKGLCLKGRTFEALNLYDHAVSKGF--SFDEVCYGTLINGLCKMGKTRDAIELLRKMEK 189
Query: 517 AGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQKDTPG 576
GVR + +Y ++ + E L + GI +D Y +L+ G
Sbjct: 190 GGVRPNLIMYNMVVDGLCKEGLVTEACGLCSEMVGKGICIDVFTYNSLIHGFCGAGQFQG 249
Query: 577 ALHLFKEMKESKIPRSGHQEFEMLVKG-CAQNHEAGLMAKLLQEVKEGQRIDCGVHDWNN 635
A+ L EM + R F +LV C A +K G D V N
Sbjct: 250 AVRLLNEMVMKEDVRPDVYTFNILVDALCKLGMVAEARNVFGLMIKRGLEPD--VVSCNA 307
Query: 636 VIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAI 678
+++ +C + M +A++ RM G LPN ++ +++ GY +
Sbjct: 308 LMNGWCLRGCMSEAKEVFDRMVERGKLPNVISYSTLINGYCKV 350
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 60/255 (23%), Positives = 97/255 (38%), Gaps = 10/255 (3%)
Query: 501 LGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASC 560
LG + A ++ ++ G +L+K R E L A S G D C
Sbjct: 104 LGQMGLAFSVMAKIVKRGFGVDPFTLTTLMKGLCLKGRTFEALNLYDHAVSKGFSFDEVC 163
Query: 561 YEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQE- 619
Y L+ T A+ L ++M++ + R + M+V G + L E
Sbjct: 164 YGTLINGLCKMGKTRDAIELLRKMEKGGV-RPNLIMYNMVVDGLCKEGLVTEACGLCSEM 222
Query: 620 VKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHL-PNAQTFHSMVTGYAAI 678
V +G ID V +N++IH FC Q A + L M + P+ TF+ +V +
Sbjct: 223 VGKGICID--VFTYNSLIHGFCGAGQFQGAVRLLNEMVMKEDVRPDVYTFNILVDALCKL 280
Query: 679 GGKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFI 738
G E ++G M + D ++++ + G + A EV M E
Sbjct: 281 -GMVAEARNVFGLM----IKRGLEPDVVSCNALMNGWCLRGCMSEAKEVFDRMVERGKLP 335
Query: 739 DKYKYRTLFLKYHKT 753
+ Y TL Y K
Sbjct: 336 NVISYSTLINGYCKV 350
>gi|297813013|ref|XP_002874390.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297320227|gb|EFH50649.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 1027
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 56/236 (23%), Positives = 102/236 (43%), Gaps = 5/236 (2%)
Query: 457 LVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQAHDLLDEMHL 516
LV A GK +E H ++N+ + D +I + G L A ++ + MH
Sbjct: 734 LVNALTNRGKHREAEHISRTCLEKNMAL--DTVGYNTLIKAMLEAGKLQCASEIYERMHT 791
Query: 517 AGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQKDTPG 576
+GV S Y +++ Y + + + +AR +G+ LD Y ++
Sbjct: 792 SGVPCSIQTYNTMISVYGRGLQLDKAIEIFSNARRSGLYLDEKIYTNMIMHYGKAGKMSE 851
Query: 577 ALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRIDCGVHDWNNV 636
AL LF EM++ I + G + M+VK CA + + +LLQ + E I + ++
Sbjct: 852 ALSLFSEMQKKGI-KPGTPSYNMVVKICATSRLHREVDELLQAM-ERTGICTESSTYLSL 909
Query: 637 IHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEM 692
I + + +AEK + M+ G +P + S++ A G E ++ +M
Sbjct: 910 IQAYAESSQFAEAEKTITLMQEKG-IPLFHSHFSLLLSAFAKAGMMDEAERIYSKM 964
Score = 43.9 bits (102), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 66/336 (19%), Positives = 144/336 (42%), Gaps = 25/336 (7%)
Query: 271 KAEQLLDIMPRIGVKADSNLLIIMAHIYERNGRREELRKLQRHIDEAVNLSDIQFRQFYN 330
KAE L DI+ ++G++ + + + +Y R + +E ++L E+ L + +
Sbjct: 642 KAEILADIIIKLGLRIEEETVATLIAVYGRQHKLKEAKRLYVSAGESKTLG----KSVIS 697
Query: 331 CLLSCHLKFGDLNSASKMVLEMLQRAKEARNSLAAAMLPFNAVGVNNRTPSEQNVNCT-- 388
++ +++ G L A + +E ++ + ++ ++L NA+ + ++++ T
Sbjct: 698 SMIDAYVRCGWLEDAFGLFMESAEKGCDP-GAITISIL-VNALTNRGKHREAEHISRTCL 755
Query: 389 -NSVDLENSG-------IIENHILSYEDFTKDRKF---VALEAEVKRVLQTLLG---MLQ 434
++ L+ G ++E L +R V + + ++ G L
Sbjct: 756 EKNMALDTVGYNTLIKAMLEAGKLQCASEIYERMHTSGVPCSIQTYNTMISVYGRGLQLD 815
Query: 435 KQVELITT-EHGILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGH 493
K +E+ + L EKIY ++ + +AGK E + +K+ ++ +
Sbjct: 816 KAIEIFSNARRSGLYLDEKIYTNMIMHYGKAGKMSEALSLFSEMQKKGIKPG--TPSYNM 873
Query: 494 VITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAG 553
V+ +C + + +LL M G+ SS Y SL++AY E+++ E + + G
Sbjct: 874 VVKICATSRLHREVDELLQAMERTGICTESSTYLSLIQAYAESSQFAEAEKTITLMQEKG 933
Query: 554 IQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKI 589
I L S + LL + A ++ +M E+ I
Sbjct: 934 IPLFHSHFSLLLSAFAKAGMMDEAERIYSKMSEAGI 969
>gi|147841407|emb|CAN66681.1| hypothetical protein VITISV_005087 [Vitis vinifera]
Length = 882
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 65/279 (23%), Positives = 123/279 (44%), Gaps = 19/279 (6%)
Query: 497 LCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQL 556
LC + G +++ DLL++M + G + + + ++L A ++ R + G++L
Sbjct: 481 LCAA-GEIEKTMDLLNDMLVMGFHPTPTTHKAVLDASSKSRRADVILHXHDQLVGMGVKL 539
Query: 557 DASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKG-CAQNHEAGLMAK 615
D S Y L+ + A +FK+M I + + L+ G C +H A
Sbjct: 540 DLSTYNTLISTFCRLGMIRRATLVFKDMMGKGI-LADIITYNALIHGYCISSHLKKAFAV 598
Query: 616 LLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGY 675
Q + EG + V +N ++ RL+++A + +M+ G +PNA T+ +V+G+
Sbjct: 599 HSQMLTEG--VSPNVETYNILLGGLSAARLIKEAAGLVNQMKERGLVPNATTYDILVSGH 656
Query: 676 AAIGGKYTEVTELWGEM--KSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEE 733
I G E +L+ EM K F T + ++ F +G ++A E++ M+
Sbjct: 657 GKI-GNMKECVKLYCEMITKGFVPKT------RTYNVLISCFAKGKKMSQAKELMQEMQV 709
Query: 734 GKMFIDKYKYRTLFLKYHK-----TLYKGKTPKFQTEAQ 767
+ + Y L ++K L K +Q EA+
Sbjct: 710 RGIPPNSSTYDILICGWYKLSKQPELNKSLKRSYQAEAK 748
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 61/257 (23%), Positives = 113/257 (43%), Gaps = 10/257 (3%)
Query: 497 LCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQL 556
LC S G +++A + EM GV + YA+L+ + + E L GI
Sbjct: 132 LCKS-GKVEEAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGF 190
Query: 557 DASCYEALLQSKIVQKDTPGALHLFKEM-KESKIPRSGHQEFEMLVKGCAQNHEAGLMAK 615
D Y AL+ A +F+ + +ES +P + L+ G + +
Sbjct: 191 DVVVYTALMDGLFKAGMANNAEDMFQVLLEESLVPNC--VTYSALIDGHCKLGDVNKGEL 248
Query: 616 LLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGY 675
LLQE++E + I V +++++ + KK L+ +A +++M LPN + +++ GY
Sbjct: 249 LLQEMEE-KHIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGY 307
Query: 676 AAIGGKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGK 735
+ + +L+ EMKS + NF ++DS + R G A+E+ M
Sbjct: 308 FKADQRGIAL-DLFKEMKSRGLEEN-NF---VIDSFVNNLKRSGRMEEADELFKDMMSRG 362
Query: 736 MFIDKYKYRTLFLKYHK 752
+ D+ Y ++ + K
Sbjct: 363 LLPDRVNYTSMMDGFFK 379
>gi|91806021|gb|ABE65739.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 450
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 55/252 (21%), Positives = 103/252 (40%), Gaps = 11/252 (4%)
Query: 444 HGILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGW 503
H + P Y ++ F + + + H +L S D +I +
Sbjct: 178 HRCIFPDTVTYNSMIYGFCKHNRFDDAKHMF------DLMASPDVVTFNTIIDVYCRAKR 231
Query: 504 LDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEA 563
+D+ LL E+ G+ A+++ Y +L+ + E + L ++ S G+ D
Sbjct: 232 VDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNI 291
Query: 564 LLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVK-E 622
LL + AL LF+ ++ SKI + +++ G + + L +
Sbjct: 292 LLYGFCENEKLEEALELFEVIQMSKIDLDT-VAYNIIIHGMCKGSKVDEAWDLFCSLPIH 350
Query: 623 GQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKY 682
G D V +N +I FC K + DA +M+ GH P+ T+++++ G G+
Sbjct: 351 GVEPD--VQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLK-AGEI 407
Query: 683 TEVTELWGEMKS 694
+ EL EM+S
Sbjct: 408 DKSIELISEMRS 419
Score = 47.4 bits (111), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 46/209 (22%), Positives = 86/209 (41%), Gaps = 13/209 (6%)
Query: 526 YASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMK 585
+ +L+ R E AL+ G+ +D Y ++ DT AL+L +M+
Sbjct: 13 FNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKME 72
Query: 586 ESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRL 645
E+ I ++ + C H + + +++G I V +N +I FC
Sbjct: 73 ETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKG--IAPNVFTYNCMIDGFCSFGR 130
Query: 646 MQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEMKS---FASSTSMN 702
DA++ L+ M P+ TF+++++ + GK E +L EM F + + N
Sbjct: 131 WSDAQRLLRDMIEREINPDVLTFNALISA-SVKEGKLFEAEKLCDEMLHRCIFPDTVTYN 189
Query: 703 FDEELLDSVLYTFVRGGFFARANEVVAMM 731
S++Y F + F A + +M
Sbjct: 190 -------SMIYGFCKHNRFDDAKHMFDLM 211
>gi|222637127|gb|EEE67259.1| hypothetical protein OsJ_24425 [Oryza sativa Japonica Group]
Length = 799
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 65/294 (22%), Positives = 120/294 (40%), Gaps = 12/294 (4%)
Query: 454 YIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQAHDLLDE 513
Y L+KA AG+ K+ H L + + D G ++ +L L+ A LL E
Sbjct: 256 YNILLKALCTAGRIKD-AHQLF----DEMASPPDVVTYGIMVHGYCTLSELETAIKLLSE 310
Query: 514 MHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQKD 573
M G+ + Y S++ + + + ++ D G+ LDA+ + ++ + D
Sbjct: 311 MAARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGD 370
Query: 574 TPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRIDCGVHDW 633
A + F EM++ + G + L+ G + E ++LQE+ E + +D +
Sbjct: 371 LAAARNWFDEMQKRGLAADG-VTYTALINGLCRAGELKEAERVLQEM-EDKGLDVDAVTY 428
Query: 634 NNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEMK 693
+I +CK M +A +M PN T+ ++ G G EL EM
Sbjct: 429 TVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCK-QGDVCAANELLHEM- 486
Query: 694 SFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFIDKYKYRTLF 747
S + + +S++ + G +A + M+E + D Y Y T+
Sbjct: 487 ---CSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTII 537
Score = 45.1 bits (105), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 47/220 (21%), Positives = 94/220 (42%), Gaps = 10/220 (4%)
Query: 454 YIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQAHDLLDE 513
Y L+ +AG ++ +I ++ L+ D +I LD+AH LL E
Sbjct: 498 YNSLINGLCKAGNLEQAMRTMIDMDEAGLK--PDVYTYTTIIGALCQSKELDRAHSLLQE 555
Query: 514 MHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQKD 573
M G++ + Y L+ + + R LL I + + Y +L++ ++K+
Sbjct: 556 MLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKN 615
Query: 574 TPGALHLFKEMKESKIPRSGHQEFEMLVKG-C-AQNHEAGLMAKLLQEVKEGQRIDCGVH 631
++K M ++ + +L+KG C A+N + L + +++G R+
Sbjct: 616 MKSTTEIYKGMLSQEV-VPNENTYNILIKGHCKARNMKEALYFH-SEMIEKGFRLTAS-- 671
Query: 632 DWNNVIHFFCKKRLMQDAEKALKRMRS--LGHLPNAQTFH 669
+N +I KK+ +A + ++MR L P+ F+
Sbjct: 672 SYNALIRLLNKKKKFTEARRLFEKMRKERLTAEPDVYNFY 711
Score = 43.5 bits (101), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 48/224 (21%), Positives = 94/224 (41%), Gaps = 6/224 (2%)
Query: 454 YIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQAHDLLDE 513
Y L+ + + GK E FL+ + +V+ + + G + A++LL E
Sbjct: 428 YTVLIDGYCKVGKMTEA--FLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHE 485
Query: 514 MHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQKD 573
M G+ + Y SL+ +A + + D AG++ D Y ++ + K+
Sbjct: 486 MCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKE 545
Query: 574 TPGALHLFKEMKESKIPRSGHQEFEMLVKG-CAQNHEAGLMAKLLQEVKEGQRIDCGVHD 632
A L +EM + I + + +L+ G C G K L E + I
Sbjct: 546 LDRAHSLLQEMLDKGI-KPTIVTYNVLMNGFCMSGRVEG--GKRLLEWMLEKNIHPNTTT 602
Query: 633 WNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYA 676
+N+++ +C ++ M+ + K M S +PN T++ ++ G+
Sbjct: 603 YNSLMKQYCIEKNMKSTTEIYKGMLSQEVVPNENTYNILIKGHC 646
>gi|357500061|ref|XP_003620319.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495334|gb|AES76537.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 496
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 56/264 (21%), Positives = 109/264 (41%), Gaps = 14/264 (5%)
Query: 491 LGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDAR 550
+ V T C G + +A ++ M G + + Y+SL+ Y + ++ +
Sbjct: 223 MAPVSTFCKE-GKVKEAKNVFAAMMKKGFKPNVVTYSSLMDGYCLVKEVNKAKSIFNNMA 281
Query: 551 SAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEA 610
G+ D Y L+ K T A++LF+EM KI + L+ G ++ +
Sbjct: 282 QGGVNPDIQSYNILINGFCKIKMTDAAMNLFEEMHCRKI-IPNVVTYNSLIDGLCKSGKI 340
Query: 611 GLMAKLLQEVKE-GQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFH 669
KL+ E+ + GQ D + +++++ CK A L +++ G PN T+
Sbjct: 341 SYALKLVDEMHDRGQPPD--IITYSSLLDALCKNHPGDKAIALLTKLKDQGLQPNMYTYT 398
Query: 670 SMVTGYAAIGGKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVA 729
++ G GG+ + ++ ++ N + +++ F G F A +++
Sbjct: 399 ILINGLCK-GGRPEDAQNIFEDLL----VKGYNINVNTYTVMIHVFCNNGMFGEALAMLS 453
Query: 730 MMEEGKMFIDKYKY----RTLFLK 749
MEE + Y R+LF K
Sbjct: 454 KMEENGCIPNAVTYEIIIRSLFDK 477
>gi|224130398|ref|XP_002320827.1| predicted protein [Populus trichocarpa]
gi|222861600|gb|EEE99142.1| predicted protein [Populus trichocarpa]
Length = 775
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 61/284 (21%), Positives = 123/284 (43%), Gaps = 52/284 (18%)
Query: 457 LVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQAHDLLDEMHL 516
LV G+ +F ++A++ ++ D +I ++ ++A +L +EM
Sbjct: 460 LVGGMCRTGRVSSAVNFFVEAQRRGMK--GDAVTYTALINAFCNVNNFEKAMELFNEMLK 517
Query: 517 AGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQKDTPG 576
+G + VY +L+ + +A R + + +L + + GI+ D CY L+ G
Sbjct: 518 SGCSPDAIVYYTLISGFSQAGRMADASFVLAELKKLGIRPDTVCYNTLI----------G 567
Query: 577 ALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRIDCGVHDWNNV 636
+ +K H+ FEML + EAGL + +N +
Sbjct: 568 GF-----CRTNKF----HRVFEML----KEMEEAGLKPDTIT--------------YNTL 600
Query: 637 IHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEMKSFA 696
I + K ++ A+K +++M G +P T+ +++ Y + G E E++ +MK+ A
Sbjct: 601 IAYASKNGDLKFAQKVMRKMIKAGVVPTVATYGAVINAY-CLNGNGNEAMEIFKDMKA-A 658
Query: 697 SSTSMNFDEELLDSVLYTFVRGGFFARANEV---VAMMEEGKMF 737
S N +V+Y + + N+V V++ME+ K++
Sbjct: 659 SKVPPN-------TVIYNILINS-LCKNNKVKSAVSLMEDMKIW 694
Score = 48.5 bits (114), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 58/260 (22%), Positives = 102/260 (39%), Gaps = 30/260 (11%)
Query: 504 LDQAHDLLDEM----HLAGVRASSS----VYASLLKAYIEANRPREVTALLRDARS-AGI 554
+D A ++L++M G+ S +Y +L+ + R +E L+ RS G
Sbjct: 356 VDDALEVLEKMSGGKESGGISVSVEPDVVIYNTLIDGLCKVGRQQEGLGLMERMRSQKGC 415
Query: 555 QLDASCYEALLQSKIVQKDTPGALHLFKEM-KESKIPRSGHQEFEMLVKG-CAQNHEAGL 612
D Y L+ + LF EM KE P LV G C +
Sbjct: 416 APDTITYNCLIDGFCKAGEIEKGKELFDEMNKEGVAPNV--VTVNTLVGGMCRTGRVSSA 473
Query: 613 MAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMV 672
+ ++ + G + D + +I+ FC + A + M G P+A +++++
Sbjct: 474 VNFFVEAQRRGMKGD--AVTYTALINAFCNVNNFEKAMELFNEMLKSGCSPDAIVYYTLI 531
Query: 673 TGYAAIGGKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGF-----FARANEV 727
+G++ G+ + + + E+K D+V Y + GGF F R E+
Sbjct: 532 SGFSQ-AGRMADASFVLAELKKLGIRP---------DTVCYNTLIGGFCRTNKFHRVFEM 581
Query: 728 VAMMEEGKMFIDKYKYRTLF 747
+ MEE + D Y TL
Sbjct: 582 LKEMEEAGLKPDTITYNTLI 601
>gi|297836911|ref|XP_002886337.1| F1N19.15 [Arabidopsis lyrata subsp. lyrata]
gi|297332178|gb|EFH62596.1| F1N19.15 [Arabidopsis lyrata subsp. lyrata]
Length = 1059
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 86/180 (47%), Gaps = 5/180 (2%)
Query: 502 GWLDQAHDLLDEMHLAGVRASSSV-YASLLKAYIEANRPREVTALLRDARSAGIQLDASC 560
G ++ A +LL+EM G A+ V Y +LL + R+ +LRD I D
Sbjct: 184 GDVNIALELLNEMEKKGRLAADLVTYNTLLTGLCYSGEWRQAARILRDMTKRRINPDVFT 243
Query: 561 YEALLQSKIVQKDTPGALHLFKEMKESKI-PRSGHQEFEMLVKGCAQNHEAGLMAKLLQE 619
+ AL+ + + Q + A L+K+M +S I P + + L+ G H AK +
Sbjct: 244 FTALIDAFVKQGNLDEAQELYKQMLQSSIGPNT--VTYNSLINGLCM-HGRLYHAKKTFD 300
Query: 620 VKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIG 679
+ + V +N +I+ FCK R ++D K +RM G + + T+++++ GY +G
Sbjct: 301 LMASKGCFPNVVTYNTLINGFCKSRRVEDGMKLFQRMYREGLVGDTFTYNTLIHGYCQVG 360
Score = 59.3 bits (142), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 95/215 (44%), Gaps = 3/215 (1%)
Query: 480 ENLQVSHDDAALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRP 539
ENL +SHD + +I A LL +M G + S SLL + + NR
Sbjct: 642 ENLGISHDLYSFTILIHCFCRCSRFSLALALLGKMMKLGFQPSIVTLGSLLNGFCQGNRF 701
Query: 540 REVTALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEM 599
+E +L+ G++ + Y ++ +D AL +F M++ I +
Sbjct: 702 QEAVSLVDSMAELGLEPNVVIYNTVINGLCKNRDLNNALEIFYGMEKKGIVADA-VTYNT 760
Query: 600 LVKGCAQNHEAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSL 659
L+ G + A+LL+++ + ++ID V + +I F K+ + +A+ K M
Sbjct: 761 LISGLCNSGRWTDAARLLRDMVK-RKIDPNVIFFTALIDTFVKEGNLLEAKNLYKEMIRR 819
Query: 660 GHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEMKS 694
PN T++S++ G+ I G+ + ++ M S
Sbjct: 820 SVHPNILTYNSLINGF-CIQGRLGDAKHMFDLMVS 853
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/234 (21%), Positives = 100/234 (42%), Gaps = 3/234 (1%)
Query: 449 PTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQAH 508
P+ + +L+ A + + + +F + E +SHD + +I L A
Sbjct: 63 PSVVDFTRLLTAIANLRRYETVIYF--SQQMELFGISHDLYSFTILIHCFCRCSRLSLAL 120
Query: 509 DLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSK 568
+L +M G S + SLL + NR + +L+ +G + + Y L+
Sbjct: 121 SILGKMMKLGYDPSIVTFGSLLHGFCLRNRIHDAFSLVASMVKSGYEPNVVVYNTLIDCL 180
Query: 569 IVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRIDC 628
D AL L EM++ + + L+ G + E A++L+++ + +RI+
Sbjct: 181 CKNGDVNIALELLNEMEKKGRLAADLVTYNTLLTGLCYSGEWRQAARILRDMTK-RRINP 239
Query: 629 GVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKY 682
V + +I F K+ + +A++ K+M PN T++S++ G G Y
Sbjct: 240 DVFTFTALIDAFVKQGNLDEAQELYKQMLQSSIGPNTVTYNSLINGLCMHGRLY 293
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 60/249 (24%), Positives = 108/249 (43%), Gaps = 19/249 (7%)
Query: 504 LDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEA 563
L+ A ++ M G+ A + Y +L+ + R + LLRD I + + A
Sbjct: 736 LNNALEIFYGMEKKGIVADAVTYNTLISGLCNSGRWTDAARLLRDMVKRKIDPNVIFFTA 795
Query: 564 LLQSKIVQKDTPGALHLFKEMKESKIPRSGHQE---FEMLVKG-CAQNH--EAGLMAKLL 617
L+ + + + + A +L+KEM I RS H + L+ G C Q +A M L+
Sbjct: 796 LIDTFVKEGNLLEAKNLYKEM----IRRSVHPNILTYNSLINGFCIQGRLGDAKHMFDLM 851
Query: 618 QEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAA 677
V +G D V +N +I FCK + ++D K M G + +A T+++++ GY
Sbjct: 852 --VSKGCFPD--VVTYNTLITGFCKSKRVEDGMKLFCEMTHQGLVGDAFTYNTLIHGYCQ 907
Query: 678 IGGKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMF 737
GK +++ M + LLD + G +A +V +++ +M
Sbjct: 908 -AGKLNVAQKVFNRMVDCGVPPDIVTYNILLDCL----CNNGKIEKALVMVEDLQKNQMD 962
Query: 738 IDKYKYRTL 746
+D Y +
Sbjct: 963 VDIITYNII 971
Score = 47.4 bits (111), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 73/368 (19%), Positives = 137/368 (37%), Gaps = 65/368 (17%)
Query: 329 YNCLLSCHLKFGDLNSASKMVLEMLQRAKEARNSLAAAMLPFNAVGVNNRTPSEQNVNCT 388
YN L+ C K GD+N A +++ EM E + LAA ++ +N +
Sbjct: 173 YNTLIDCLCKNGDVNIALELLNEM-----EKKGRLAADLVTYNTLLTG------------ 215
Query: 389 NSVDLENSGIIENHILSYEDFTKDRKFVALEAEVKRVLQTLLGMLQKQVELITTEHGILQ 448
+ E ++ + L M ++++
Sbjct: 216 ---------------------------LCYSGEWRQAARILRDMTKRRI----------N 238
Query: 449 PTEKIYIKLVKAFLEAG---KTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLD 505
P + L+ AF++ G + +EL ++++ V+++ G LC+ G L
Sbjct: 239 PDVFTFTALIDAFVKQGNLDEAQELYKQMLQSSIGPNTVTYNSLING----LCMH-GRLY 293
Query: 506 QAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALL 565
A D M G + Y +L+ + ++ R + L + G+ D Y L+
Sbjct: 294 HAKKTFDLMASKGCFPNVVTYNTLINGFCKSRRVEDGMKLFQRMYREGLVGDTFTYNTLI 353
Query: 566 QSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQR 625
A +F M + +L+ G N E G +++ G++
Sbjct: 354 HGYCQVGKLRVAKDIFSWMVSCGVTPDIITHC-ILLHGLCVNGEIGSAMVKFNDMRSGEK 412
Query: 626 IDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEV 685
G+ +N +IH CK +++A + R+ G P+A+T+ M+ G G E
Sbjct: 413 Y-LGIVAYNIMIHGLCKADKVEEAWELFCRLPVEGVKPDARTYTIMILGLCK-NGPRREA 470
Query: 686 TELWGEMK 693
EL+ MK
Sbjct: 471 DELFRRMK 478
>gi|225456753|ref|XP_002268934.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g74580 [Vitis vinifera]
gi|297733985|emb|CBI15232.3| unnamed protein product [Vitis vinifera]
Length = 764
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 80/185 (43%), Gaps = 7/185 (3%)
Query: 494 VITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAG 553
+ LC + ++ H L +M G Y S++ Y + + +LRD G
Sbjct: 292 ICGLCKNFKVVEAEH-YLRKMVNEGYEPDGFTYNSIIDGYCKLGMMQNADQILRDGAFKG 350
Query: 554 IQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLM 613
D S Y +L+ D A+++F E E + + LVKG +Q GL+
Sbjct: 351 FVPDESTYCSLINGLCQDGDIDRAINVFNEAMEKGL-KPNLVLCNTLVKGLSQQ---GLI 406
Query: 614 AKLLQEVKEGQRIDCGVHDW--NNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSM 671
+ L+ + E C W N VI+ CK + DA+ + + GHLP+ TF+++
Sbjct: 407 LQALKLMNEMSENGCSPDIWTYNLVINGLCKIGCVSDADNLVIDAIAKGHLPDVFTFNTL 466
Query: 672 VTGYA 676
+ GY
Sbjct: 467 IDGYC 471
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 61/274 (22%), Positives = 109/274 (39%), Gaps = 41/274 (14%)
Query: 440 ITTEHGILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCI 499
+ ++G+L E +YI ++ + GK +E + + N + S + ++ + +
Sbjct: 68 MNIDNGLL---EGVYIGAMRNYGRKGKIQEAVDVFERMDFFNCEPSVQ--SYNAIMNILV 122
Query: 500 SLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDAS 559
+ DQAH + M G+ + +K++ +RP LL + S G + A
Sbjct: 123 EYRYFDQAHKVYMRMRDKGIVPDVYTFTIRMKSFCRTSRPHAARRLLNNMPSQGCESSAV 182
Query: 560 CYEALLQSKIVQKDTPGALHLFKEMKESKIP--------------RSGH-QEFEML---- 600
Y ++ + A LF+EM I R GH QE E L
Sbjct: 183 AYCTVIGGFYEENHRVEAHELFEEMLGLGICPDIMAFNKLIHTLCRKGHVQESERLLNKV 242
Query: 601 ---------------VKGCAQNHEAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRL 645
++G Q +LL V G D V +N +I CK
Sbjct: 243 LKRGVSPNLFTVNIFIQGFCQRAMLNEAIRLLDGVGRGLTPD--VITYNTLICGLCKNFK 300
Query: 646 MQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIG 679
+ +AE L++M + G+ P+ T++S++ GY +G
Sbjct: 301 VVEAEHYLRKMVNEGYEPDGFTYNSIIDGYCKLG 334
>gi|357155349|ref|XP_003577091.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g52620-like [Brachypodium distachyon]
Length = 877
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 71/306 (23%), Positives = 128/306 (41%), Gaps = 15/306 (4%)
Query: 445 GILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDD-AALGHVITLCISLGW 503
G P + L+ + G+ +E L + + L + +L H C+ G
Sbjct: 393 GGCDPDAITFSTLISGLCQEGRVQEAERLLRETTRWELNPNLSSYTSLIH--GFCVR-GE 449
Query: 504 LDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQL--DASCY 561
+ A +LL EM G + +L+ + A + E ALL + A QL DA+ Y
Sbjct: 450 VIVASNLLVEMMERGHTPDVVTFGALIHGLVVAGQVSE--ALLVREKMAARQLLPDANIY 507
Query: 562 EALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVK 621
L+ +K P A +L +EM E + + L+ G +N E+ A+ + E
Sbjct: 508 NVLISGLCKKKMLPAARNLIEEMLEQNV-HPDKYVYTTLIDGFIRN-ESLDEARKIFEFM 565
Query: 622 EGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGK 681
E + I V +N +I +C+ +M +A + + MR +G +P+ T+ +++ GYA G
Sbjct: 566 EQKGIHPDVVGYNAMIKGYCQFGMMNEAVECMSTMRKVGRIPDEFTYTTLIGGYAKQGNI 625
Query: 682 YTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFIDKY 741
++ L MK + + S++ + + G A + ME +F +
Sbjct: 626 SGALSLLCDMMKRRCQPNVVAY-----SSLINGYCKLGDTDAAECLFGSMESQGLFPNVI 680
Query: 742 KYRTLF 747
Y L
Sbjct: 681 TYTILI 686
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 83/184 (45%), Gaps = 8/184 (4%)
Query: 552 AGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAG 611
AG +A Y L+ + D + L EM E+K + L+ + +
Sbjct: 288 AGCVPNAVFYNVLIDGYCRRGDVGRGILLLGEM-EAKGLLPTVVTYGTLMSWLGRKGDLE 346
Query: 612 LMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSM 671
+A LL E++E +R+ V +N+VI CK R A LK+M + G P+A TF ++
Sbjct: 347 KIASLLSEMRE-RRLPPNVQIYNSVIDALCKCRSASQALVVLKQMFAGGCDPDAITFSTL 405
Query: 672 VTGYAAIGGKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTF-VRGGFFARANEVVAM 730
++G G+ E L E + +N + S+++ F VRG +N +V M
Sbjct: 406 ISGLCQ-EGRVQEAERLLRETTRW----ELNPNLSSYTSLIHGFCVRGEVIVASNLLVEM 460
Query: 731 MEEG 734
ME G
Sbjct: 461 MERG 464
>gi|343887304|dbj|BAK61850.1| PPR containing protein [Citrus unshiu]
Length = 567
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 62/256 (24%), Positives = 113/256 (44%), Gaps = 28/256 (10%)
Query: 449 PTEKIYIKLVKAFLEAGKTKE----LTHFLIKAEKENLQVSHDDAALGHVITLCISLGWL 504
P Y L+ + + G+ +E + + + + N +++++ G LCI+ G +
Sbjct: 260 PNHVTYTTLIDGYCKKGELEEAKKCMNEMMNRGCRPN-ELTYNAMIYG----LCIN-GRV 313
Query: 505 DQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEAL 564
D+A L+ +M L G + + S + S+LK + + LR+ A + D YE +
Sbjct: 314 DEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVV 373
Query: 565 LQ--SKIVQKDTPGALHLFKEMKESKIPR---SGHQEFEMLVKGCAQNHEAGLMAKLLQE 619
+ KI + D A+ L KEM+ + S + F +LV E G + + +
Sbjct: 374 INGFCKIGKSDE--AISLLKEMRARGLKPTVFSFNAVFRILV-------ENGELDRAILL 424
Query: 620 VKEGQRIDC--GVHDWNNVIHFFC-KKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYA 676
+K+ ++DC +N +I C K MQD E + RM GH + + ++ GY
Sbjct: 425 LKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYC 484
Query: 677 AIGGKYTEVTELWGEM 692
G V ++ EM
Sbjct: 485 E-EGNVENVMQIAHEM 499
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 61/309 (19%), Positives = 129/309 (41%), Gaps = 24/309 (7%)
Query: 445 GILQPTEKIY-IKLVKAFLEAGKTKELTHFLIKAEKENLQVSHD------DAALGHVITL 497
G+++ +K++ + VK L A T + F K + E+ ++ D D HV
Sbjct: 208 GMIENAKKVFDVMTVKPNLLAYNTM-INGFCKKGDMESARLVFDRMMSGEDCLPNHVTYT 266
Query: 498 CISLGW-----LDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSA 552
+ G+ L++A ++EM G R + Y +++ R E L+ R
Sbjct: 267 TLIDGYCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLN 326
Query: 553 GIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGL 612
G + + S ++++L+ V A+ + + E+ + + +E+++ G + ++
Sbjct: 327 GFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANM-NPDVKSYEVVINGFCKIGKSDE 385
Query: 613 MAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMV 672
LL+E++ + + V +N V + + A LK+M + LPN ++++++
Sbjct: 386 AISLLKEMR-ARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTII 444
Query: 673 TGYAAIGGKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMME 732
G G+ +V +L M + LD +Y+ + G+ N M
Sbjct: 445 CGLCMAKGRMQDVEDLVDRMIRSGHN---------LDFTMYSCLLKGYCEEGNVENVMQI 495
Query: 733 EGKMFIDKY 741
+M KY
Sbjct: 496 AHEMVTKKY 504
>gi|242070015|ref|XP_002450284.1| hypothetical protein SORBIDRAFT_05g003220 [Sorghum bicolor]
gi|241936127|gb|EES09272.1| hypothetical protein SORBIDRAFT_05g003220 [Sorghum bicolor]
Length = 727
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 54/234 (23%), Positives = 98/234 (41%), Gaps = 38/234 (16%)
Query: 447 LQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQ 506
++PT Y L+ +FL+ G+ E + L + E + +D VI+ G L+
Sbjct: 239 IEPTIVTYNTLLDSFLKEGRKDEASMLLKEMETQGGGCLLNDVTYNVVISFLAREGHLEN 298
Query: 507 AHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQ 566
A L+D M L+ +ASS Y L+ A +E ++V AL + + GI Y A++
Sbjct: 299 AAKLVDSMRLSK-KASSFTYNPLITALLERGFVQKVEALQMEMENEGIMPTLVTYNAIIH 357
Query: 567 SKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRI 626
+ + A F EM+ GL+ L+
Sbjct: 358 GLLKSEQVEAAQLKFAEMR-----------------------AMGLLPDLIT-------- 386
Query: 627 DCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGG 680
+N++++ +CK +++A L +R G P T+++++ GY +GG
Sbjct: 387 ------YNSMLNGYCKAGNLKEALWLLGDLRRAGLAPTVLTYNTLIDGYCRLGG 434
Score = 53.1 bits (126), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 60/254 (23%), Positives = 101/254 (39%), Gaps = 16/254 (6%)
Query: 505 DQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRD--ARSAGIQLDASCYE 562
D + EM + + Y +LL ++++ R E + LL++ + G L+ Y
Sbjct: 225 DDVRAVYREMLQLEIEPTIVTYNTLLDSFLKEGRKDEASMLLKEMETQGGGCLLNDVTYN 284
Query: 563 ALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQE---FEMLVKGCAQNHEAGLMAKLLQE 619
++ + A L M+ SK S +L +G Q EA LQ
Sbjct: 285 VVISFLAREGHLENAAKLVDSMRLSKKASSFTYNPLITALLERGFVQKVEA------LQM 338
Query: 620 VKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIG 679
E + I + +N +IH K ++ A+ MR++G LP+ T++SM+ GY
Sbjct: 339 EMENEGIMPTLVTYNAIIHGLLKSEQVEAAQLKFAEMRAMGLLPDLITYNSMLNGYCK-A 397
Query: 680 GKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFID 739
G E L G+++ + ++ L+D + R G A + M E F D
Sbjct: 398 GNLKEALWLLGDLRRAGLAPTVLTYNTLIDG----YCRLGGLEEARRLKEEMVEQGCFPD 453
Query: 740 KYKYRTLFLKYHKT 753
Y L HK
Sbjct: 454 VCTYTILMNGSHKV 467
Score = 43.1 bits (100), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 86/400 (21%), Positives = 160/400 (40%), Gaps = 54/400 (13%)
Query: 298 YERNGRREELRKLQRHIDE---AVNLSDIQFRQFYNCLLSCHLKFGDLNSASKMVLEMLQ 354
+ + GR++E L + ++ L+D+ YN ++S + G L +A+K+V M
Sbjct: 253 FLKEGRKDEASMLLKEMETQGGGCLLNDVT----YNVVISFLAREGHLENAAKLVDSMRL 308
Query: 355 RAKEAR---NSLAAAMLPFNAVGVNNRTPSEQNVNCTNSVDLENSGIIENHILSYE---- 407
K + N L A+L V Q V +++EN GI+ +++Y
Sbjct: 309 SKKASSFTYNPLITALLERGFV---------QKVEALQ-MEMENEGIMPT-LVTYNAIIH 357
Query: 408 DFTKDRKFVALEAEVKRVLQTLLGMLQKQVELITTEHGILQPTEKIYIKLVKAFLEAGKT 467
K + A A++K +G+L +LIT Y ++ + +AG
Sbjct: 358 GLLKSEQVEA--AQLKFAEMRAMGLLP---DLIT------------YNSMLNGYCKAGNL 400
Query: 468 KELTHFLIKAEKENLQ---VSHDDAALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSS 524
KE L + L ++++ G+ LG L++A L +EM G
Sbjct: 401 KEALWLLGDLRRAGLAPTVLTYNTLIDGYC-----RLGGLEEARRLKEEMVEQGCFPDVC 455
Query: 525 VYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEM 584
Y L+ + + S G+Q D Y + ++++ DT A L +E+
Sbjct: 456 TYTILMNGSHKVRNLPMAREFFDEMLSKGLQPDCFAYNTRICAELILGDTHKAFQL-REV 514
Query: 585 KESKIPRSGHQEFEMLVKG-CAQNHEAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKK 643
K + +++ G C + ++ V +G + DC + +IH C++
Sbjct: 515 MMLKGIYPDTVTYNVIIDGLCKTGNLKDAKDLKMKMVSDGLQPDCIT--YTCLIHAHCER 572
Query: 644 RLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYT 683
L+ +A K L M S G P+ T+ ++ G Y+
Sbjct: 573 GLLSEARKLLNGMVSDGLQPSVVTYTILIHTCCRRGNLYS 612
>gi|125556718|gb|EAZ02324.1| hypothetical protein OsI_24426 [Oryza sativa Indica Group]
gi|125598467|gb|EAZ38247.1| hypothetical protein OsJ_22623 [Oryza sativa Japonica Group]
Length = 478
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 68/287 (23%), Positives = 127/287 (44%), Gaps = 11/287 (3%)
Query: 447 LQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQ 506
L+P+ Y +L++A AG+T E L+ E L + D A ++ +S L
Sbjct: 82 LRPSGAAYARLIRALARAGRTLEAEALLL--EMRRLGLRPDAAHYNALLEGLLSTAHLRL 139
Query: 507 AHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQ 566
A LL +M GV + Y LL AY A R + +L + + GI+LD + Y L++
Sbjct: 140 ADRLLLQMADDGVARNRRTYMLLLNAYARAGRLEDSWWVLGEMKRRGIRLDTAGYSTLVR 199
Query: 567 SKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEV-KEGQR 625
A L EM+E + + + L+ + + K+ ++ EG +
Sbjct: 200 LYRDNGMWKKATDLIMEMQELGVELD-VKIYNGLIDTFGKYGQLADARKVFDKMCAEGVK 258
Query: 626 IDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEV 685
D + WN++I + C+ + A + M+ G P+ + F ++++ GK+ E+
Sbjct: 259 PD--ITTWNSLIRWHCRVGNTKRALRFFAAMQEEGMYPDPKIFVTIISRLGE-QGKWDEI 315
Query: 686 TELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMME 732
+L+ M++ S L+D + + G F A++ VA ++
Sbjct: 316 KKLFHGMRNRGLKESGAVYAVLVD----IYGQYGHFRDAHDCVAALK 358
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 58/241 (24%), Positives = 109/241 (45%), Gaps = 13/241 (5%)
Query: 510 LLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKI 569
LL +M AG+R S + YA L++A A R E ALL + R G++ DA+ Y ALL+ +
Sbjct: 73 LLADMQAAGLRPSGAAYARLIRALARAGRTLEAEALLLEMRRLGLRPDAAHYNALLEGLL 132
Query: 570 VQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVK-EGQRIDC 628
A L +M + + R+ + + +L+ A+ +L E+K G R+D
Sbjct: 133 STAHLRLADRLLLQMADDGVARN-RRTYMLLLNAYARAGRLEDSWWVLGEMKRRGIRLDT 191
Query: 629 GVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTEL 688
++ ++ + + + A + M+ LG + + ++ ++ + GKY ++ +
Sbjct: 192 A--GYSTLVRLYRDNGMWKKATDLIMEMQELGVELDVKIYNGLIDTF----GKYGQLAD- 244
Query: 689 WGEMKSF--ASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFIDKYKYRTL 746
K F + + D +S++ R G RA A M+E M+ D + T+
Sbjct: 245 --ARKVFDKMCAEGVKPDITTWNSLIRWHCRVGNTKRALRFFAAMQEEGMYPDPKIFVTI 302
Query: 747 F 747
Sbjct: 303 I 303
>gi|297836398|ref|XP_002886081.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297331921|gb|EFH62340.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 743
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 114/536 (21%), Positives = 216/536 (40%), Gaps = 63/536 (11%)
Query: 247 IAMKPNTNTFNIALAGCLLFETT---RKAEQLLDIMPRIGVKADSNLLIIMAHIYERNGR 303
+ +KPN T N L G + + ++ A ++ D M +IGV D ++ + Y G+
Sbjct: 160 LKLKPNLLTCNTLLIGLVRYPSSFSIASAREVFDDMVKIGVSLDVKTFNVLVNGYCLEGK 219
Query: 304 REE-LRKLQRHIDE-AVNLSDIQFRQFYNCLLSCHLKFGDLNSASKMVLEMLQRAKEARN 361
E+ L L+R + E VN ++ YN +L K G L+ ++L+M +R N
Sbjct: 220 LEDALGMLERMVSEFNVNPDNVT----YNTILKAMSKKGRLSDVKDLLLDM-KRNGLVPN 274
Query: 362 SLAAAMLPFNAVGVNNRTPSEQNVN-----------CTNSVDLE---NSGIIENHILSYE 407
+ L + + + + Q V CT ++ + N+G I L
Sbjct: 275 RVTYNNLVYGYCKLGSLKEAFQIVELMKQTNILPDLCTYNILINGVCNAGSIREG-LELM 333
Query: 408 DFTKDRKF----VALEAEVKRVLQTLLGMLQKQVELITTEHGILQPTEKIYIKLVKAFLE 463
D K K V + + L + K++ + E+ ++P + + +K +
Sbjct: 334 DVMKSLKLQPDVVTYNTLIDGCFELGLSLEAKKL-MEQMENDGVKPNQVTHNISLKWLCK 392
Query: 464 AGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQAHDLLDEMHLAGVRASS 523
K +E+T +K E S D +I + +G L A +++ EM G++ ++
Sbjct: 393 EEKREEVTR-KVKELVEMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNT 451
Query: 524 SVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKE 583
++L A + + E LL A G +D Y L+ ++ A ++ E
Sbjct: 452 ITLNTILDALCKERKVDEAHNLLDSAHKRGYIVDEVTYGTLIMGYFREEKVEKAFEMWDE 511
Query: 584 MKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRI--DCGVHDWNNVIHFFC 641
MK KI + F L+ G + + L + E+ E + DC +N++I +C
Sbjct: 512 MKRIKITPTV-TTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDCT---FNSIILGYC 567
Query: 642 KKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEMKSFASSTSM 701
K+ G + A F++ ++ YT L G K + ++
Sbjct: 568 KE----------------GRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMTEKAL 611
Query: 702 NF-----DEELLDSVLYT-----FVRGGFFARANEVVAMMEEGKMFIDKYKYRTLF 747
NF E +D+V Y F + A ++++ MEE ++ D++ Y ++
Sbjct: 612 NFFNTLITEREVDTVTYNTMISAFCKDKKLKEAYDLLSEMEEKRLEPDRFTYNSII 667
>gi|224145829|ref|XP_002325779.1| predicted protein [Populus trichocarpa]
gi|222862654|gb|EEF00161.1| predicted protein [Populus trichocarpa]
Length = 586
Score = 60.1 bits (144), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 45/191 (23%), Positives = 90/191 (47%), Gaps = 5/191 (2%)
Query: 504 LDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEA 563
+D+A L +EM G+ ++ Y +L+ A+ + + RE L +D + G D Y
Sbjct: 387 IDEAKQLFNEMIHQGLTPNTVSYTTLIHAFCQLGKLREARELFKDMHTNGYLPDLCTYSV 446
Query: 564 LLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEV-KE 622
LL+ Q A LF+ M+ + + + + +L+ ++ KL E+
Sbjct: 447 LLEGFCKQGYLGKAFRLFRAMQGTYL-KPNLVMYTILIDSMCKSGNLNHARKLFSELFVH 505
Query: 623 GQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKY 682
G + D V + +I+ CK+ L+ +A +A ++M G PN +++ ++ G+ +
Sbjct: 506 GLQPD--VQIYTTIINGLCKEGLLDEALEAFRKMEEDGCPPNEFSYNVIIRGFLQHKDE- 562
Query: 683 TEVTELWGEMK 693
+ +L GEM+
Sbjct: 563 SRAVQLIGEMR 573
Score = 53.5 bits (127), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 74/175 (42%), Gaps = 2/175 (1%)
Query: 502 GWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCY 561
G QA +L D+M G + Y +++ + L++ G Q D Y
Sbjct: 175 GEFAQALELFDDMVARGCQPDVYTYTTIINGLCKMGETAAAAGLIKKMGEVGCQPDVVTY 234
Query: 562 EALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVK 621
L+ S + AL +F MK I + + L++G + +L E+
Sbjct: 235 STLIDSLCKDRLVNEALDIFSYMKAKGISPT-VVSYTSLIQGLCSFSRWKEASAMLNEMT 293
Query: 622 EGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYA 676
I + ++ +I FCK+ + +A+ LK M +G PN T++S++ GY+
Sbjct: 294 S-LNIMPDIVTFSLLIDIFCKEGNVLEAQGVLKTMTEMGVEPNVITYNSLMHGYS 347
Score = 46.6 bits (109), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 55/286 (19%), Positives = 113/286 (39%), Gaps = 11/286 (3%)
Query: 448 QPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQA 507
QP Y ++ + G+T + K + Q D +I +++A
Sbjct: 193 QPDVYTYTTIINGLCKMGETAAAAGLIKKMGEVGCQ--PDVVTYSTLIDSLCKDRLVNEA 250
Query: 508 HDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQS 567
D+ M G+ + Y SL++ +R +E +A+L + S I D + L+
Sbjct: 251 LDIFSYMKAKGISPTVVSYTSLIQGLCSFSRWKEASAMLNEMTSLNIMPDIVTFSLLIDI 310
Query: 568 KIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQ-EVKEGQRI 626
+ + A + K M E + + L+ G + E KL + G +
Sbjct: 311 FCKEGNVLEAQGVLKTMTEMGV-EPNVITYNSLMHGYSLQMEVVEARKLFDVMITRGCKP 369
Query: 627 DCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVT 686
D V ++ +I+ +C + + +A++ M G PN ++ +++ + + GK E
Sbjct: 370 D--VFSYSILINGYCMVKRIDEAKQLFNEMIHQGLTPNTVSYTTLIHAFCQL-GKLREAR 426
Query: 687 ELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMME 732
EL+ +M + + LL+ F + G+ +A + M+
Sbjct: 427 ELFKDMHTNGYLPDLCTYSVLLEG----FCKQGYLGKAFRLFRAMQ 468
Score = 42.4 bits (98), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 41/197 (20%), Positives = 79/197 (40%), Gaps = 16/197 (8%)
Query: 444 HGILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISL-- 501
H L P Y L+ AF + GK +E +E + H + L + T + L
Sbjct: 399 HQGLTPNTVSYTTLIHAFCQLGKLRE--------ARELFKDMHTNGYLPDLCTYSVLLEG 450
Query: 502 ----GWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLD 557
G+L +A L M ++ + +Y L+ + ++ L + G+Q D
Sbjct: 451 FCKQGYLGKAFRLFRAMQGTYLKPNLVMYTILIDSMCKSGNLNHARKLFSELFVHGLQPD 510
Query: 558 ASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLL 617
Y ++ + AL F++M+E P + ++++G Q+ + +L+
Sbjct: 511 VQIYTTIINGLCKEGLLDEALEAFRKMEEDGCP-PNEFSYNVIIRGFLQHKDESRAVQLI 569
Query: 618 QEVKE-GQRIDCGVHDW 633
E+++ G D G W
Sbjct: 570 GEMRDKGFVADEGTTAW 586
>gi|224713522|gb|ACN62068.1| PPR-814b [Zea mays]
Length = 814
Score = 60.1 bits (144), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 84/179 (46%), Gaps = 6/179 (3%)
Query: 518 GVRASSSVYASLLKAYIEANRPRE-VTALLRDARSAGIQLDASCYEALLQSKIVQKDTPG 576
G+R + + LLK + EA R E + LL G D Y LL+S Q +
Sbjct: 141 GLRVNIIIANHLLKGFCEAKRTDEALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQ 200
Query: 577 ALHLFKEMKES-KIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQE-VKEGQRIDCGVHDWN 634
A L + M E + + ++ G + + L +E V+ G D ++
Sbjct: 201 ADDLLRMMAEGGAVCSPDVVAYSTVIDGFFKEGDVNKACDLFKEMVQRGIPPD--FVTYS 258
Query: 635 NVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEMK 693
+V+H CK R M AE L++M + G LPN T+++++ GY++ G++ E ++ EM+
Sbjct: 259 SVVHALCKARAMDKAEAFLRQMVNKGVLPNNWTYNNLIYGYSST-GQWKEAVRVFKEMR 316
Score = 53.1 bits (126), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 43/226 (19%), Positives = 92/226 (40%), Gaps = 4/226 (1%)
Query: 447 LQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQ 506
L PT +Y L+ + GK ++ ++ +D G ++ +G +D+
Sbjct: 530 LHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIE--PNDVVYGTLVNGYCKIGRIDE 587
Query: 507 AHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQ 566
L EM G++ S+ +Y ++ EA R + +GI ++ Y +L+
Sbjct: 588 GLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYNIVLR 647
Query: 567 SKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRI 626
+ A+ LFKE++ + + ++ G Q L + +
Sbjct: 648 GLFKNRCFDEAIFLFKELRAMNV-KINIITLNTMIAGMFQTRRVEEAKDLFASISRSGLV 706
Query: 627 DCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMV 672
C V ++ +I K+ L+++AE M++ G P+++ + +V
Sbjct: 707 PC-VVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPDSRLLNHVV 751
Score = 46.6 bits (109), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 81/364 (22%), Positives = 135/364 (37%), Gaps = 29/364 (7%)
Query: 398 IIENHILSYEDFTKDRKFVALEAEVKRVLQTLLGMLQKQVELITTEHGILQPTEKIYIKL 457
II NH+L + F E KR + L +L + EL P Y L
Sbjct: 147 IIANHLL--------KGF----CEAKRTDEALDILLHRTPELGCV------PDVFSYSIL 188
Query: 458 VKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQAHDLLDEMHLA 517
+K+ + GK+ + L + S D A VI G +++A DL EM
Sbjct: 189 LKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYSTVIDGFFKEGDVNKACDLFKEMVQR 248
Query: 518 GVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQKDTPGA 577
G+ Y+S++ A +A + A LR + G+ + Y L+ A
Sbjct: 249 GIPPDFVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPNNWTYNNLIYGYSSTGQWKEA 308
Query: 578 LHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVK-EGQRIDCGVHDWNNV 636
+ +FKEM+ I ML+ + + + + +GQ + V + +
Sbjct: 309 VRVFKEMRRHSI-LPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPN--VFSYTIM 365
Query: 637 IHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEMKSFA 696
++ + K + D M G P+ TF+ ++ YA G + ++ EM+
Sbjct: 366 LNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFNVLIKAYANC-GMLDKAMIIFNEMRDHG 424
Query: 697 SSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFIDKYKYRTLFLKY--HKTL 754
D +V+ R G A E M + + DKY Y L + H +L
Sbjct: 425 VKP----DVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSL 480
Query: 755 YKGK 758
K K
Sbjct: 481 LKAK 484
Score = 43.1 bits (100), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 112/537 (20%), Positives = 194/537 (36%), Gaps = 81/537 (15%)
Query: 257 NIALAGCLL--FETTRKAEQLLDIM----PRIGVKADSNLLIIMAHIYERNGRREELRKL 310
NI +A LL F ++ ++ LDI+ P +G D I+ G+ + L
Sbjct: 145 NIIIANHLLKGFCEAKRTDEALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDL 204
Query: 311 QRHIDE--AVNLSDIQFRQFYNCLLSCHLKFGDLNSASKMVLEMLQRAKE----ARNSLA 364
R + E AV D+ Y+ ++ K GD+N A + EM+QR +S+
Sbjct: 205 LRMMAEGGAVCSPDVVA---YSTVIDGFFKEGDVNKACDLFKEMVQRGIPPDFVTYSSVV 261
Query: 365 AAMLPFNAVGVNNRTPSEQNVNCTNSVDLENSGIIENHILSYEDFTKDRKFVALEAEVKR 424
A+ A+ + N L N+ N I Y + ++ V + E++R
Sbjct: 262 HALCKARAMDKAEAFLRQM----VNKGVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRR 317
Query: 425 --------VLQTLLGMLQKQVEL-------ITTEHGILQPTEKIYIKLVKAFLEAGKTKE 469
L L+G L K ++ T P Y ++ + G +
Sbjct: 318 HSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPNVFSYTIMLNGYATKGCLVD 377
Query: 470 LTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASL 529
+T + ++ D +I + G LD+A + +EM GV+ Y ++
Sbjct: 378 MTDLFDLMLGDG--IAPDIYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTV 435
Query: 530 LKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKI 589
+ A + + G+ D Y L+Q T G+L KE+ +
Sbjct: 436 IAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFC----THGSLLKAKELISEIM 491
Query: 590 PRSGHQE---FEMLVKGCAQNHEAGLMAKLLQEVKEGQRI-----DCGVHD----WNNVI 637
H + F ++ + L V + Q I + G+H ++ ++
Sbjct: 492 NNGMHLDIVFFSSIINNLCK----------LGRVMDAQNIFDLTVNVGLHPTAVVYSMLM 541
Query: 638 HFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEM--KSF 695
+C M+ A + M S G PN + ++V GY I G+ E L+ EM K
Sbjct: 542 DGYCLVGKMEKALRVFDAMVSAGIEPNDVVYGTLVNGYCKI-GRIDEGLSLFREMLQKGI 600
Query: 696 ASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAM-----MEEGKMFIDKYKYRTLF 747
ST +LY + G F V A M E + ++K Y +
Sbjct: 601 KPST-----------ILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYNIVL 646
Score = 40.8 bits (94), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 60/254 (23%), Positives = 98/254 (38%), Gaps = 16/254 (6%)
Query: 446 ILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLD 505
+L PT Y L+ A + + F + + L+V+ A H++ D
Sbjct: 106 VLSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIA--NHLLKGFCEAKRTD 163
Query: 506 QAHDLLDEMHLA---GVRASSSVYASLLKAYIEANRPREVTALLRDARSAG--IQLDASC 560
+A D+L +H G Y+ LLK+ + + + LLR G D
Sbjct: 164 EALDIL--LHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVA 221
Query: 561 YEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEV 620
Y ++ + D A LFKEM + IP ++ C A L Q V
Sbjct: 222 YSTVIDGFFKEGDVNKACDLFKEMVQRGIPPDFVTYSSVVHALCKARAMDKAEAFLRQMV 281
Query: 621 KEGQRIDCGVHDW--NNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAI 678
+G ++W NN+I+ + ++A + K MR LP+ T SM+ G
Sbjct: 282 NKGVL----PNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTL-SMLMGSLCK 336
Query: 679 GGKYTEVTELWGEM 692
GK E +++ M
Sbjct: 337 YGKIKEARDVFDTM 350
>gi|449451888|ref|XP_004143692.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g16880-like [Cucumis sativus]
gi|449529106|ref|XP_004171542.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g16880-like [Cucumis sativus]
Length = 783
Score = 60.1 bits (144), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 51/249 (20%), Positives = 102/249 (40%), Gaps = 7/249 (2%)
Query: 504 LDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEA 563
L +A DLL +M G+ + Y L+ Y +E T ++ + Y
Sbjct: 264 LQEARDLLLDMKSKGLSPNKHTYNMLVCGYCRLGLLKEATKVIEIMTRNNLLPTVWTYNM 323
Query: 564 LLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEG 623
L+ A + EM++ + + L+ GC+Q ++ + L++E+ +
Sbjct: 324 LVNGFCNDGKIDEAFRIRDEMEKMNV-LPDVVTYNTLIDGCSQWRDSSEVYSLIEEM-DK 381
Query: 624 QRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYT 683
+ + C +N ++ + CKK M +A L +M G P+ T+++++ Y GK
Sbjct: 382 KGVKCNAVTYNIILKWMCKKGNMTEATTTLDKMEENGLSPDCVTYNTLIGAYCK-AGKMG 440
Query: 684 EVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFIDKYKY 743
+ + EM +S + D L+++L+ A ++ + +D+ Y
Sbjct: 441 KAFRMMDEM----TSKGLKIDTWTLNTILHCLCVEKKLDEAYNLLCSASKRGYILDEVSY 496
Query: 744 RTLFLKYHK 752
L L Y K
Sbjct: 497 GILILGYFK 505
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 82/387 (21%), Positives = 146/387 (37%), Gaps = 76/387 (19%)
Query: 430 LGMLQ---KQVELITTEHGILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSH 486
LG+L+ K +E++T + L PT Y LV F GK E F I+ E E + V
Sbjct: 296 LGLLKEATKVIEIMTRNN--LLPTVWTYNMLVNGFCNDGKIDE--AFRIRDEMEKMNVLP 351
Query: 487 DDAALGHVITLCISLGWLD--QAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTA 544
D +I C W D + + L++EM GV+ ++ Y +LK + E T
Sbjct: 352 DVVTYNTLIDGCSQ--WRDSSEVYSLIEEMDKKGVKCNAVTYNIILKWMCKKGNMTEATT 409
Query: 545 LLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMK------------------- 585
L G+ D Y L+ + A + EM
Sbjct: 410 TLDKMEENGLSPDCVTYNTLIGAYCKAGKMGKAFRMMDEMTSKGLKIDTWTLNTILHCLC 469
Query: 586 -ESKIPRS--------------GHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRIDCGV 630
E K+ + + +L+ G ++ + L E+KE Q + +
Sbjct: 470 VEKKLDEAYNLLCSASKRGYILDEVSYGILILGYFKDEKGDRALNLWDEMKERQIMPSTI 529
Query: 631 HDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGK------YTE 684
+N+VI C+ R + A L M G +P+ T++ ++ G+ G + E
Sbjct: 530 -TYNSVIGGLCQSRKVDQAIDKLNEMLENGLVPDETTYNIIIHGFCLEGNVEKAFQFHNE 588
Query: 685 VTE----------------------LWGEMKSFASSTSMNFDEELL--DSVLYTFVRGGF 720
+ E L +K F + S D +++ ++++ + + G
Sbjct: 589 MIENLFKPDVYTCNILLRGLCREGMLEKALKLFNTLVSKGKDIDVVTYNTIISSLCKEGK 648
Query: 721 FARANEVVAMMEEGKMFIDKYKYRTLF 747
F A +++ ME K+ D+Y Y+ +
Sbjct: 649 FENAYDLLTEMEAKKLGPDQYTYKVII 675
Score = 42.0 bits (97), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 47/225 (20%), Positives = 90/225 (40%), Gaps = 22/225 (9%)
Query: 532 AYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKES---- 587
AY++ ++P T + + + + L+ S + + L + +K+S
Sbjct: 149 AYVQMDQPHLATQIFNKMKRLNYRPNLLTCNTLMNSLVRYPSSSSILLARQVLKDSIKLG 208
Query: 588 KIPRSGHQEFEMLVKG-CAQNHEAGLMAKLLQEVKEGQRIDC--GVHDWNNVIHFFCKKR 644
+P + F +L+ G C ++ + L V + C +N ++ K+R
Sbjct: 209 VVPNT--NSFNILIYGYCLESK----VKDALDWVNKMSEFGCVPDTVSYNTILDALLKRR 262
Query: 645 LMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIG--GKYTEVTELWGEMKSFASSTSMN 702
L+Q+A L M+S G PN T++ +V GY +G + T+V E+ + + N
Sbjct: 263 LLQEARDLLLDMKSKGLSPNKHTYNMLVCGYCRLGLLKEATKVIEIMTRNNLLPTVWTYN 322
Query: 703 FDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFIDKYKYRTLF 747
++ F G A + ME+ + D Y TL
Sbjct: 323 M-------LVNGFCNDGKIDEAFRIRDEMEKMNVLPDVVTYNTLI 360
Score = 41.2 bits (95), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 53/255 (20%), Positives = 102/255 (40%), Gaps = 13/255 (5%)
Query: 518 GVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQKDTPGA 577
GV +++ + L+ Y ++ ++ + G D Y +L + + ++ A
Sbjct: 208 GVVPNTNSFNILIYGYCLESKVKDALDWVNKMSEFGCVPDTVSYNTILDALLKRRLLQEA 267
Query: 578 LHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLM--AKLLQEVKEGQRIDCGVHDWNN 635
L +MK + + H + MLV G + GL+ A + E+ + V +N
Sbjct: 268 RDLLLDMKSKGLSPNKHT-YNMLVCGYCR---LGLLKEATKVIEIMTRNNLLPTVWTYNM 323
Query: 636 VIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEM-KS 694
+++ FC + +A + M + LP+ T+++++ G + +EV L EM K
Sbjct: 324 LVNGFCNDGKIDEAFRIRDEMEKMNVLPDVVTYNTLIDGCSQWRDS-SEVYSLIEEMDKK 382
Query: 695 FASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFIDKYKYRTLFLKYHKTL 754
++ ++ +L + G A + MEE + D Y TL Y K
Sbjct: 383 GVKCNAVTYN-----IILKWMCKKGNMTEATTTLDKMEENGLSPDCVTYNTLIGAYCKAG 437
Query: 755 YKGKTPKFQTEAQLK 769
GK + E K
Sbjct: 438 KMGKAFRMMDEMTSK 452
>gi|356529509|ref|XP_003533333.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g12300, mitochondrial-like [Glycine max]
Length = 450
Score = 60.1 bits (144), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 79/171 (46%), Gaps = 4/171 (2%)
Query: 504 LDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEA 563
+D+A +L EMH + + Y SL+ ++ R V L+ + GI D Y +
Sbjct: 261 VDEALNLFKEMHQKNMVPTIVTYGSLMDGLCKSGRISYVWELIDEMHDRGIPADVITYNS 320
Query: 564 LLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEG 623
L+ A+ LF +MK+ + R F +L+ G + ++ Q++
Sbjct: 321 LIDGLCKNGHLDRAIALFNKMKDXRFDR---LTFTILLDGLCKGGRLKDAQEVFQDLLT- 376
Query: 624 QRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTG 674
+ D V+ +N +I+ +CK+ L+++A +M G +P+A TF ++
Sbjct: 377 KEYDLDVYPYNVMINGYCKQGLLEEALTMRSKMEDNGCIPSAVTFEIIINA 427
Score = 42.4 bits (98), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 48/246 (19%), Positives = 104/246 (42%), Gaps = 9/246 (3%)
Query: 448 QPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQA 507
QP + L+K G+ + HF K + ++ D + G +I +G A
Sbjct: 137 QPHTITFTTLIKGLCLKGQVNKALHFHDKLLAQGIKF--DQVSYGTLINGVCKIGDTRGA 194
Query: 508 HDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQS 567
L+ ++ + + +Y +++ A + E L + + GI + Y +++
Sbjct: 195 IKLVRKIDGRLTKPNVEMYNTIIDALCKYQLVSEAYGLFSEMTAKGISANVVSYNIMIKG 254
Query: 568 KIVQKDTPGALHLFKEM-KESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRI 626
K AL+LFKEM +++ +P + L+ G ++ + +L+ E+ + + I
Sbjct: 255 FCKSKMVDEALNLFKEMHQKNMVPTI--VTYGSLMDGLCKSGRISYVWELIDEMHD-RGI 311
Query: 627 DCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVT 686
V +N++I CK + A +M+ + TF ++ G GG+ +
Sbjct: 312 PADVITYNSLIDGLCKNGHLDRAIALFNKMKDXRF--DRLTFTILLDGLCK-GGRLKDAQ 368
Query: 687 ELWGEM 692
E++ ++
Sbjct: 369 EVFQDL 374
>gi|297808179|ref|XP_002871973.1| kinase family protein [Arabidopsis lyrata subsp. lyrata]
gi|297317810|gb|EFH48232.1| kinase family protein [Arabidopsis lyrata subsp. lyrata]
Length = 831
Score = 60.1 bits (144), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 40/185 (21%), Positives = 87/185 (47%), Gaps = 1/185 (0%)
Query: 499 ISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDA 558
I G +AH + + + G + S Y +L+ A + +L+ + G++ D
Sbjct: 330 IERGRPQEAHSIFNTLIEEGHKPSIITYTTLVTALTRQKHFHSLLSLISKVQKNGLRPDT 389
Query: 559 SCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQ 618
+ A++ + + A+ +F++MKES + F L+KG + + ++LL+
Sbjct: 390 ILFNAIINASSESGNLDQAMKIFEKMKESGC-KPTASTFNTLIKGYGKIGKLEESSRLLE 448
Query: 619 EVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAI 678
+ + + N ++ +C +R +++A + +M+S G P+A TF+++ Y+ I
Sbjct: 449 MMLRDEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSFGVKPDAVTFNTLARAYSRI 508
Query: 679 GGKYT 683
G T
Sbjct: 509 GSTCT 513
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 69/312 (22%), Positives = 131/312 (41%), Gaps = 21/312 (6%)
Query: 448 QPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQA 507
+P+ Y LV A L + K +K L+ D +I G LDQA
Sbjct: 351 KPSIITYTTLVTALTRQKHFHSLLSLISKVQKNGLR--PDTILFNAIINASSESGNLDQA 408
Query: 508 HDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDA-RSAGIQLDASCYEALLQ 566
+ ++M +G + ++S + +L+K Y + + E + LL R +Q + L+Q
Sbjct: 409 MKIFEKMKESGCKPTASTFNTLIKGYGKIGKLEESSRLLEMMLRDEMLQPNDRTCNILVQ 468
Query: 567 SKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVK-----GCAQNHEAGLMAKLLQ-EV 620
+ Q+ A ++ +M+ + + F L + G E ++ ++L +V
Sbjct: 469 AWCNQRKIEEAWNIVYKMQSFGV-KPDAVTFNTLARAYSRIGSTCTAEDMIIPRMLHNKV 527
Query: 621 KEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGG 680
K R CG +++ +C++ M++A + RM+ LG PN F+S++ G+ I
Sbjct: 528 KPNVRT-CGT-----IVNGYCEEGKMEEALRFFYRMKELGVHPNLFVFNSLIKGFLNI-N 580
Query: 681 KYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFIDK 740
V E+ M+ F + D +++ + G R E+ M EG + D
Sbjct: 581 DMDGVGEVVDLMEEFG----VKPDVVTFSTLMNAWSSVGDMKRCEEIYRDMLEGGIDPDI 636
Query: 741 YKYRTLFLKYHK 752
+ + L Y +
Sbjct: 637 HAFSILAKGYAR 648
Score = 41.6 bits (96), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 42/235 (17%), Positives = 97/235 (41%), Gaps = 5/235 (2%)
Query: 446 ILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLD 505
+LQP ++ LV+A+ K +E + + K + + V D + +G
Sbjct: 455 MLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQ--SFGVKPDAVTFNTLARAYSRIGSTC 512
Query: 506 QAHDLL-DEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEAL 564
A D++ M V+ + +++ Y E + E + G+ + + +L
Sbjct: 513 TAEDMIIPRMLHNKVKPNVRTCGTIVNGYCEEGKMEEALRFFYRMKELGVHPNLFVFNSL 572
Query: 565 LQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQ 624
++ + D G + M+E + + F L+ + + ++ +++ EG
Sbjct: 573 IKGFLNINDMDGVGEVVDLMEEFGV-KPDVVTFSTLMNAWSSVGDMKRCEEIYRDMLEGG 631
Query: 625 RIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIG 679
ID +H ++ + + + + AE+ L +MR G PN + +++G+ + G
Sbjct: 632 -IDPDIHAFSILAKGYARAGEPEKAEQILNQMRKFGVRPNVVIYTQIISGWCSAG 685
>gi|218194011|gb|EEC76438.1| hypothetical protein OsI_14128 [Oryza sativa Indica Group]
Length = 669
Score = 60.1 bits (144), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 56/247 (22%), Positives = 104/247 (42%), Gaps = 12/247 (4%)
Query: 487 DDAALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALL 546
D A+ H++ G L + +L EM G S Y L++A+ E A+L
Sbjct: 86 DTASYRHIVDAFAGAGNLSRVAELFAEMAATGHTPDPSAYLGLMEAHTRVGATAEAVAVL 145
Query: 547 RDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQ 606
R ++ G A+ Y LL Q G LF+EM+ + P + + +L +
Sbjct: 146 RQMQADGCPPTAATYRVLLDLYGRQGRFDGVRELFREMRTTVPPDTA--TYNVLFRVFGD 203
Query: 607 NHEAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQ 666
+ +L Q++ + ++ + NV+ + L +DA + L + + G +P A+
Sbjct: 204 GGFFKEVVELFQDMLHSE-VEPDIDTCENVMVACGRGGLHEDAREVLDYITTEGMVPTAK 262
Query: 667 TFHSMVT--GYAAIGGKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARA 724
+ +V G+AA+ Y E + M S ++ E +++ F +GG F A
Sbjct: 263 AYTGLVEALGHAAM---YEEAYVAFNMMTEIGSLPTI----ETYNALANAFAKGGLFQEA 315
Query: 725 NEVVAMM 731
+ + M
Sbjct: 316 EAIFSRM 322
>gi|115472343|ref|NP_001059770.1| Os07g0513200 [Oryza sativa Japonica Group]
gi|27818007|dbj|BAC55770.1| putative CRP1 protein [Oryza sativa Japonica Group]
gi|50509504|dbj|BAD31185.1| putative CRP1 protein [Oryza sativa Japonica Group]
gi|113611306|dbj|BAF21684.1| Os07g0513200 [Oryza sativa Japonica Group]
gi|215715304|dbj|BAG95055.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 754
Score = 60.1 bits (144), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 65/294 (22%), Positives = 120/294 (40%), Gaps = 12/294 (4%)
Query: 454 YIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQAHDLLDE 513
Y L+KA AG+ K+ H L + + D G ++ +L L+ A LL E
Sbjct: 256 YNILLKALCTAGRIKD-AHQLF----DEMASPPDVVTYGIMVHGYCTLSELETAIKLLSE 310
Query: 514 MHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQKD 573
M G+ + Y S++ + + + ++ D G+ LDA+ + ++ + D
Sbjct: 311 MAARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGD 370
Query: 574 TPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRIDCGVHDW 633
A + F EM++ + G + L+ G + E ++LQE+ E + +D +
Sbjct: 371 LAAARNWFDEMQKRGLAADG-VTYTALINGLCRAGELKEAERVLQEM-EDKGLDVDAVTY 428
Query: 634 NNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEMK 693
+I +CK M +A +M PN T+ ++ G G EL EM
Sbjct: 429 TVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCK-QGDVCAANELLHEM- 486
Query: 694 SFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFIDKYKYRTLF 747
S + + +S++ + G +A + M+E + D Y Y T+
Sbjct: 487 ---CSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTII 537
Score = 44.3 bits (103), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 47/220 (21%), Positives = 94/220 (42%), Gaps = 10/220 (4%)
Query: 454 YIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQAHDLLDE 513
Y L+ +AG ++ +I ++ L+ D +I LD+AH LL E
Sbjct: 498 YNSLINGLCKAGNLEQAMRTMIDMDEAGLK--PDVYTYTTIIGALCQSKELDRAHSLLQE 555
Query: 514 MHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQKD 573
M G++ + Y L+ + + R LL I + + Y +L++ ++K+
Sbjct: 556 MLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKN 615
Query: 574 TPGALHLFKEMKESKIPRSGHQEFEMLVKG-C-AQNHEAGLMAKLLQEVKEGQRIDCGVH 631
++K M ++ + +L+KG C A+N + L + +++G R+
Sbjct: 616 MKSTTEIYKGMLSQEV-VPNENTYNILIKGHCKARNMKEALYFH-SEMIEKGFRLT--AS 671
Query: 632 DWNNVIHFFCKKRLMQDAEKALKRMRS--LGHLPNAQTFH 669
+N +I KK+ +A + ++MR L P+ F+
Sbjct: 672 SYNALIRLLNKKKKFTEARRLFEKMRKERLTAEPDVYNFY 711
Score = 42.7 bits (99), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 46/222 (20%), Positives = 96/222 (43%), Gaps = 4/222 (1%)
Query: 454 YIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQAHDLLDE 513
Y L+ + + GK E FL+ + +V+ + + G + A++LL E
Sbjct: 428 YTVLIDGYCKVGKMTEA--FLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHE 485
Query: 514 MHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQKD 573
M G+ + Y SL+ +A + + D AG++ D Y ++ + K+
Sbjct: 486 MCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKE 545
Query: 574 TPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRIDCGVHDW 633
A L +EM + I + + +L+ G + +LL+ + E + I +
Sbjct: 546 LDRAHSLLQEMLDKGI-KPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLE-KNIHPNTTTY 603
Query: 634 NNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGY 675
N+++ +C ++ M+ + K M S +PN T++ ++ G+
Sbjct: 604 NSLMKQYCIEKNMKSTTEIYKGMLSQEVVPNENTYNILIKGH 645
>gi|302805861|ref|XP_002984681.1| hypothetical protein SELMODRAFT_30598 [Selaginella moellendorffii]
gi|300147663|gb|EFJ14326.1| hypothetical protein SELMODRAFT_30598 [Selaginella moellendorffii]
Length = 651
Score = 60.1 bits (144), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 64/305 (20%), Positives = 127/305 (41%), Gaps = 15/305 (4%)
Query: 447 LQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQ 506
L+P IY LV AF +AG+ + L E L + + ++ + G + +
Sbjct: 356 LKPDIVIYNILVHAFCKAGRMDKALGVLENIEANRLLPTIE--TYTSILDGYVKGGNIQK 413
Query: 507 AHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQ 566
A ++ D + AG+R Y SLL +A + +L + + G+ Y AL +
Sbjct: 414 ALEVFDRIKTAGLRPGVVSYNSLLSGLAKARQMENARLMLNEMLANGVVPSERIYTALTE 473
Query: 567 SKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEV-----K 621
D A +F+ MK+ + + L+K C + A++ Q++ K
Sbjct: 474 GYARTGDVEKAFGVFQRMKKENLAID-IVAYGALLKACCNSGAMHGAAEVFQQITDAGLK 532
Query: 622 EGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGK 681
Q C + D + + +++AE+ + M G P+ ++S++ Y + G+
Sbjct: 533 HNQITYCTMLDGA-----YARAGRVEEAEELVSAMERDGTKPDTLIYNSLINAY-GVSGR 586
Query: 682 YTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFIDKY 741
+ ++ L +M +SS D ++++ + + GF RA E+ + K+ D
Sbjct: 587 HEDMEALLAKMVK-SSSKQTKPDIGTYNTLIQVYAQAGFIPRAEELFQGLARLKLVPDAT 645
Query: 742 KYRTL 746
+ L
Sbjct: 646 TWTAL 650
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 59/269 (21%), Positives = 112/269 (41%), Gaps = 28/269 (10%)
Query: 447 LQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQ 506
++P IY L+ A+ EA + + + +Q+ ++A +I+ S G +
Sbjct: 162 IKPNVHIYTSLIHAYAEARDMEGAVACTEEMLSQGIQL--NEAVFCSIISGYASAGNNEA 219
Query: 507 AHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQ 566
A ++ + VY S+++AY +A V ALL G Q + Y +L
Sbjct: 220 AEHWFEKFKAENLVPGGIVYNSIVQAYCQAGNMETVEALLAQMEEEGFQGNLGLYTTVLN 279
Query: 567 SKIVQKDTPGALHLFKEMKESKIPRSGHQE--------------------FEMLVKGCAQ 606
+D L F +K S P++G+ + M++ G A+
Sbjct: 280 GFAEIRDEEKCLSFFHRLKVS--PQAGNMAKALDILEEMDKHGVSPNKMIYAMIMDGYAR 337
Query: 607 NHEAGLMAKLLQE-VKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNA 665
+ K+ ++ V G + D + +N ++H FCK M A L+ + + LP
Sbjct: 338 GGDFTAAFKVWEDMVSAGLKPDIVI--YNILVHAFCKAGRMDKALGVLENIEANRLLPTI 395
Query: 666 QTFHSMVTGYAAIGGKYTEVTELWGEMKS 694
+T+ S++ GY GG + E++ +K+
Sbjct: 396 ETYTSILDGYVK-GGNIQKALEVFDRIKT 423
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 55/263 (20%), Positives = 107/263 (40%), Gaps = 22/263 (8%)
Query: 507 AHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQ 566
A + M + ++ + +Y SL+ AY EA A + S GIQL+ + + +++
Sbjct: 150 ARATFEAMRASHIKPNVHIYTSLIHAYAEARDMEGAVACTEEMLSQGIQLNEAVFCSIIS 209
Query: 567 SKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRI 626
+ A H F++ K + G ++ C + + A L Q +EG +
Sbjct: 210 GYASAGNNEAAEHWFEKFKAENLVPGGIVYNSIVQAYCQAGNMETVEALLAQMEEEGFQG 269
Query: 627 DCG-----------VHDWNNVIHFFCKKRL------MQDAEKALKRMRSLGHLPNAQTFH 669
+ G + D + FF + ++ M A L+ M G PN +
Sbjct: 270 NLGLYTTVLNGFAEIRDEEKCLSFFHRLKVSPQAGNMAKALDILEEMDKHGVSPNKMIYA 329
Query: 670 SMVTGYAAIGGKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVA 729
++ GYA GG +T ++W +M S + D + + +++ F + G +A V+
Sbjct: 330 MIMDGYAR-GGDFTAAFKVWEDM----VSAGLKPDIVIYNILVHAFCKAGRMDKALGVLE 384
Query: 730 MMEEGKMFIDKYKYRTLFLKYHK 752
+E ++ Y ++ Y K
Sbjct: 385 NIEANRLLPTIETYTSILDGYVK 407
Score = 40.0 bits (92), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 61/139 (43%), Gaps = 6/139 (4%)
Query: 595 QEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALK 654
+E+ +LV A+ H + A+ E I VH + ++IH + + R M+ A +
Sbjct: 132 REYGLLVDFYAR-HGDKVAARATFEAMRASHIKPNVHIYTSLIHAYAEARDMEGAVACTE 190
Query: 655 RMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYT 714
M S G N F S+++GYA+ G E E W E + + +S++
Sbjct: 191 EMLSQGIQLNEAVFCSIISGYASAGN--NEAAEHWFEKFKAENLVPGGI---VYNSIVQA 245
Query: 715 FVRGGFFARANEVVAMMEE 733
+ + G ++A MEE
Sbjct: 246 YCQAGNMETVEALLAQMEE 264
>gi|449524916|ref|XP_004169467.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At1g74580-like [Cucumis
sativus]
Length = 877
Score = 60.1 bits (144), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 57/264 (21%), Positives = 106/264 (40%), Gaps = 39/264 (14%)
Query: 451 EKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQAHDL 510
E +YI +++ + GK +E + + + + + S + ++ + + G+ QAH +
Sbjct: 76 EGVYIGIMRDYGRKGKVQEAVNVFERMDFYDCEPSVQ--SYNAIMNILVEYGYFSQAHKV 133
Query: 511 LDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIV 570
M G+ + +K++ RP LL + G + +A Y A++
Sbjct: 134 YMRMKDIGIYPDVYTHTIRMKSFCITGRPTAALRLLNNMPGQGCEFNAVSYCAVISGFYK 193
Query: 571 QKDTPGALHLFKEM-KESKIP--------------RSGHQE------------------- 596
+ A HLF EM K+ P + QE
Sbjct: 194 ENCQIEAYHLFDEMLKQGICPDILTFNKLIHVLCKKGNVQESEKLFSKVMKRGVCPNLFT 253
Query: 597 FEMLVKGCAQNHEAGLMAKLLQE-VKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKR 655
F + ++G + A+LL+ V EG D V +N +I FCK + +AE L +
Sbjct: 254 FNIFIQGLCRKGAIDEAARLLESIVSEGLTPD--VISYNTLICGFCKHSKLVEAECYLHK 311
Query: 656 MRSLGHLPNAQTFHSMVTGYAAIG 679
M + G PN T+++++ G+ G
Sbjct: 312 MVNSGVEPNEFTYNTIINGFCKAG 335
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 78/175 (44%), Gaps = 6/175 (3%)
Query: 504 LDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEA 563
L +A L +M +GV + Y +++ + +A + +LRDA G D Y +
Sbjct: 302 LVEAECYLHKMVNSGVEPNEFTYNTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSS 361
Query: 564 LLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEG 623
L+ D A+ +F E E S + LVKG ++ GL+ + LQ +K+
Sbjct: 362 LINGLCNDGDMNRAMAVFYEAMEKGFKHS-IILYNTLVKGLSKQ---GLVLQALQLMKDM 417
Query: 624 QRIDCGVHDW--NNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYA 676
C W N V++ CK + DA L + G +P+ TF++++ GY
Sbjct: 418 MEHGCSPDIWTYNLVVNGLCKMGCLSDANGILNDAIAKGCIPDIFTFNTLIDGYC 472
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/176 (23%), Positives = 70/176 (39%), Gaps = 1/176 (0%)
Query: 504 LDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEA 563
+D+A ++LD M G+ Y +LL +A + V + G + Y
Sbjct: 477 MDKAIEILDTMLSHGITPDVITYNTLLNGLCKARKLDNVVDTFKAMLEKGCTPNIITYNI 536
Query: 564 LLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEG 623
L++S + A+ LFKEMK + L+ G N E +L +++
Sbjct: 537 LIESFCKDRKVSEAMELFKEMKTRGLT-PDIVTLCTLICGLCSNGELDKAYELFVTIEKE 595
Query: 624 QRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIG 679
+ +N +I+ FC K + AEK +M P+ T+ M+ Y G
Sbjct: 596 YKFSYSTAIFNIMINAFCXKLNVSMAEKLFHKMGGSDCAPDNYTYRVMIDSYCKTG 651
>gi|46518447|gb|AAS99705.1| At1g62720 [Arabidopsis thaliana]
Length = 426
Score = 60.1 bits (144), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 50/231 (21%), Positives = 95/231 (41%), Gaps = 9/231 (3%)
Query: 447 LQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVIT-LCISLGWLD 505
+ P + ++ F++ GK E + E V D +I LC+ G +D
Sbjct: 181 IVPNVITFTAVIDVFVKEGKFSEAMK--LYEEMTRRCVDPDVFTYNSLINGLCMH-GRVD 237
Query: 506 QAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALL 565
+A +LD M G Y +L+ + ++ R E T L R+ G+ D Y ++
Sbjct: 238 EAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTII 297
Query: 566 QSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQR 625
Q A +F M R + + +L+ G N L + +++ +
Sbjct: 298 QGYFQAGRPDAAQEIFSRMDS----RPNIRTYSILLYGLCMNWRVEKALVLFENMQKSE- 352
Query: 626 IDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYA 676
I+ + +N VIH CK ++DA + + G P+ ++ +M++G+
Sbjct: 353 IELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFC 403
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/250 (21%), Positives = 104/250 (41%), Gaps = 11/250 (4%)
Query: 448 QPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQA 507
+P L+ F + + + + K E+ + D +I +G ++ A
Sbjct: 77 EPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFR--PDVVIYNTIIDGSCKIGLVNDA 134
Query: 508 HDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQS 567
+L D M GVRA + Y SL+ + R + L+RD I + + A++
Sbjct: 135 VELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDV 194
Query: 568 KIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQN---HEAGLMAKLLQEVKEGQ 624
+ + A+ L++EM + + L+ G + EA M L+ V +G
Sbjct: 195 FVKEGKFSEAMKLYEEMTRRCVDPDVFT-YNSLINGLCMHGRVDEAKQMLDLM--VTKGC 251
Query: 625 RIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTE 684
D V +N +I+ FCK + + + K + M G + + T+++++ GY G+
Sbjct: 252 LPD--VVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQ-AGRPDA 308
Query: 685 VTELWGEMKS 694
E++ M S
Sbjct: 309 AQEIFSRMDS 318
>gi|356524758|ref|XP_003530995.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g17140-like [Glycine max]
Length = 875
Score = 60.1 bits (144), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 61/258 (23%), Positives = 113/258 (43%), Gaps = 33/258 (12%)
Query: 483 QVSHDDAALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREV 542
Q+ H D A+ H +L + S +Y LL++ + +RP V
Sbjct: 90 QLGHVDDAITHFKSL---------------RAQFPSLSPSLPLYNLLLRSTLRHHRPGFV 134
Query: 543 TALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSG--HQEFEM- 599
+ L D +A + + L+ S + AL LF++M P+ G EF +
Sbjct: 135 SWLYSDMLAARVAPQTYTFNLLIHSLCESRAFDHALQLFEKM-----PQKGCCPNEFTLG 189
Query: 600 -LVKGCAQNHEAGLMAKLLQEVKEGQRIDCGVHD---WNNVIHFFCKKRLMQDAEKALKR 655
LV+G + AGL+ + L+ V C + + +N ++ FC++ + +AE+ ++R
Sbjct: 190 ILVRGLCR---AGLVKQALELVNNNN--SCRIANRVVYNTLVSRFCREEMNNEAERLVER 244
Query: 656 MRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTF 715
M LG LP+ TF+S ++ GK E + ++ +M+ A + + +L F
Sbjct: 245 MNELGVLPDVVTFNSRISALCR-AGKVMEASRIFRDMQMDAELGLPRPNVVTFNLMLKGF 303
Query: 716 VRGGFFARANEVVAMMEE 733
+ G A +V M++
Sbjct: 304 CKHGMMGDARGLVETMKK 321
Score = 45.1 bits (105), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 95/452 (21%), Positives = 168/452 (37%), Gaps = 42/452 (9%)
Query: 248 AMKPNTNTFNIALAGCLLFETTRKAEQLLDIMPRIGVKADSNLLIIMAHIYERNGRREEL 307
++PN T+NI + G A L+D+M R GV D+ + H Y G+ E
Sbjct: 358 GIEPNAYTYNIMMDGLCRNHMLSDARGLMDLMMRNGVYPDTVAYSTLLHGYCSRGKVFEA 417
Query: 308 RKLQRHIDEAVNLSDIQFRQFYNCLLSCHLKFGDLNSASKMVLEMLQRAKEAR----NSL 363
+ + + E + N LL K G A +M+ +M ++ + N +
Sbjct: 418 KSV---LHEMIRNGCQPNTYTCNTLLHSLWKEGRTLEAEEMLQKMNEKCYQPDTVTCNIV 474
Query: 364 AAAMLPFNAVGVNNRTPSEQNVNCTNSVDLENS-----GIIENHILSYEDFTKDRKFVAL 418
+ + + SE N S+D NS I N D +
Sbjct: 475 VNGLCRNGELDKASEIVSEMWTNGPTSLDKGNSFASLINSIHNVSNCLPDGITYTTLING 534
Query: 419 EAEVKRVLQTLLGMLQKQVELITTEHGILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAE 478
+V R+ + +K +E++ L+P Y + +F + GK L E
Sbjct: 535 LCKVGRLEEA----KKKFIEMLAKN---LRPDSVTYDTFIWSFCKQGKISSAFRVLKDME 587
Query: 479 KENLQVSHDDAALGHVITLCISLGWLDQ---AHDLLDEMHLAGVRASSSVYASLLKAYIE 535
+ L L + LG +Q + L DEM G+ Y +++ E
Sbjct: 588 RNGCS-----KTLQTYNALILGLGSNNQIFEIYGLKDEMKEKGISPDICTYNNIITCLCE 642
Query: 536 ANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQ 595
+ ++ +LL + GI + S ++ L+++ D A LF E + G +
Sbjct: 643 GGKAKDAISLLHEMLDKGISPNVSSFKILIKAFSKSSDFKVACELF----EVALNICGRK 698
Query: 596 E------FEMLVKGCAQNHEAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDA 649
E F L+ G Q E AK L EV + + + ++I C+ + DA
Sbjct: 699 EALYSLMFNELLAG-GQLSE----AKELFEVSLDRYLTLKNFMYKDLIARLCQDERLADA 753
Query: 650 EKALKRMRSLGHLPNAQTFHSMVTGYAAIGGK 681
L ++ G+ + +F ++ G + G K
Sbjct: 754 NSLLYKLIDKGYGFDHASFMPVIDGLSKRGNK 785
>gi|115465257|ref|NP_001056228.1| Os05g0548600 [Oryza sativa Japonica Group]
gi|113579779|dbj|BAF18142.1| Os05g0548600 [Oryza sativa Japonica Group]
gi|222632454|gb|EEE64586.1| hypothetical protein OsJ_19438 [Oryza sativa Japonica Group]
Length = 440
Score = 60.1 bits (144), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 96/226 (42%), Gaps = 8/226 (3%)
Query: 502 GWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCY 561
G L A L+DEM GV +++ YA L++ +A+R + L+ D G Q D Y
Sbjct: 213 GELGAAERLIDEMARRGVAPNAATYALLMRGLCDADRHADAEKLMFDMEYRGCQADVVNY 272
Query: 562 EALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVK 621
L+ S+ D G L M++ K+ + + +L++ A + L E++
Sbjct: 273 GVLMSSRARHGDADGVRELLSAMRKRKL-KPDDASYNILIRCLCDAGRADEAHRALLEMQ 331
Query: 622 EGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGK 681
+ G + ++ C+ R + M + GH P A+TF + G GK
Sbjct: 332 LRGTVP-GAATYRVLVDGCCRARDFDLGLRVFNAMMASGHCPQARTFRHLARGLGE-DGK 389
Query: 682 YTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEV 727
E + +M + M+ D + +V+ T VR +A+E+
Sbjct: 390 AEEAFFVLEQM----ARREMSLDADGWQAVV-TCVRSSCSTQASEI 430
>gi|413920478|gb|AFW60410.1| hypothetical protein ZEAMMB73_296337 [Zea mays]
Length = 676
Score = 60.1 bits (144), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 84/191 (43%), Gaps = 38/191 (19%)
Query: 502 GWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCY 561
G D+A +L+++M L G + Y +++ + + + +E +LR A S G+ LD Y
Sbjct: 371 GSFDRAFELMNKMKLEGFLPNIYTYNAIIGGFCKKGKIQEAYKVLRMATSQGLHLDKVTY 430
Query: 562 EALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVK 621
L+ Q AL LFK+M E +S H +
Sbjct: 431 TILITEHCKQGHITCALDLFKQMAE----KSCHPD------------------------- 461
Query: 622 EGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGK 681
+H + +I +C++R M+ +++ + S+G +P QT+ SM+ GY + GK
Sbjct: 462 --------IHTYTTIIAMYCQQRQMEQSQQLFDKCLSIGLVPTKQTYTSMIAGYCRL-GK 512
Query: 682 YTEVTELWGEM 692
T +++ M
Sbjct: 513 LTSALKVFERM 523
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 62/277 (22%), Positives = 109/277 (39%), Gaps = 22/277 (7%)
Query: 484 VSHDDAALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVT 543
V D + ++ C G ++A LL M G S+ +++A+ R R VT
Sbjct: 177 VRPDHRSFRALVLGCCREGRFEEADALLAAMWAQGFCLDSATCTVVVRAFCRQGRFRNVT 236
Query: 544 ALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKG 603
L R G + Y A + + A H+ +EM + + + ++
Sbjct: 237 DLFRRMSEMGTPPNMVNYSAWIDGLCERGYVKQAFHVLEEMVGKGLKPNVYTHTSLIDGL 296
Query: 604 CAQNHEAGLMAK---LLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLG 660
C + G M + L ++ + VH + +I +CK+ + AE L RM G
Sbjct: 297 C----KIGWMERAFRLFLKLVKSSSYKPNVHTYTVMIGGYCKEGKLARAEMLLGRMVEQG 352
Query: 661 HLPNAQTFHSMVTGYAAIGGKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGF 720
PN T+ +++ G+ GG + EL +MK + L + Y + GGF
Sbjct: 353 LAPNTNTYTTLIHGHCK-GGSFDRAFELMNKMK---------LEGFLPNIYTYNAIIGGF 402
Query: 721 FAR-----ANEVVAMMEEGKMFIDKYKYRTLFLKYHK 752
+ A +V+ M + +DK Y L ++ K
Sbjct: 403 CKKGKIQEAYKVLRMATSQGLHLDKVTYTILITEHCK 439
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 69/299 (23%), Positives = 119/299 (39%), Gaps = 14/299 (4%)
Query: 463 EAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQAHDLLDEMHLA--GVR 520
EAG+ +E L++ L + + A + L G A + D M A GVR
Sbjct: 120 EAGRLREAADMLLELRSHGLPLVVETANWVLRVGL-RHPGCFAHAREAFDGMARAAGGVR 178
Query: 521 ASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHL 580
+ +L+ R E ALL + G LD++ ++++ Q L
Sbjct: 179 PDHRSFRALVLGCCREGRFEEADALLAAMWAQGFCLDSATCTVVVRAFCRQGRFRNVTDL 238
Query: 581 FKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFF 640
F+ M E P + + G + +L+E+ G+ + V+ ++I
Sbjct: 239 FRRMSEMGTP-PNMVNYSAWIDGLCERGYVKQAFHVLEEMV-GKGLKPNVYTHTSLIDGL 296
Query: 641 CKKRLMQDAEKA-LKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEMKSFASST 699
CK M+ A + LK ++S + PN T+ M+ GY GK L G M +
Sbjct: 297 CKIGWMERAFRLFLKLVKSSSYKPNVHTYTVMIGGYCK-EGKLARAEMLLGRMVEQGLAP 355
Query: 700 SMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFIDKYKYRTLFLKYHKTLYKGK 758
+ N ++++ +GG F RA E++ M+ + Y Y + + K KGK
Sbjct: 356 NTN----TYTTLIHGHCKGGSFDRAFELMNKMKLEGFLPNIYTYNAIIGGFCK---KGK 407
>gi|225441858|ref|XP_002278530.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g79540-like [Vitis vinifera]
Length = 798
Score = 60.1 bits (144), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 73/339 (21%), Positives = 131/339 (38%), Gaps = 19/339 (5%)
Query: 442 TEHGILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISL 501
T+ GI P IY ++ +A +T ++ H L+ K + D ++ L
Sbjct: 228 TQKGI-PPNTMIYTIILSGLCQAKRTDDV-HRLLNTMKVS-GCCPDSITCNALLDGFCKL 284
Query: 502 GWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCY 561
G +D+A LL G Y+SL+ A R EV R AGI+ D Y
Sbjct: 285 GQIDEAFALLQLFEKEGYVLGIKGYSSLIDGLFRAKRYDEVQEWCRKMFKAGIEPDVVLY 344
Query: 562 EALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVK 621
L++ AL++ +M + + + + L+KG + GL+ K
Sbjct: 345 TILIRGFCEVGMVDYALNMLNDMTQRGLSPDTYC-YNALIKGFC---DVGLLDKARSLQL 400
Query: 622 EGQRIDC--GVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIG 679
E + DC + +I C+ L+ +A + +M +LG P+ TF++++ G
Sbjct: 401 EISKNDCFPTSCTYTILICGMCRNGLLDEARQIFNQMENLGCSPSIMTFNALIDGLCK-A 459
Query: 680 GKYTEVTELWGEMK---------SFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAM 730
G+ E L+ +M+ + D L +++ G +A +++
Sbjct: 460 GELEEARHLFYKMEIGKNPSLFLRLSQGADRVMDTASLQTMVERLCESGLILKAYKLLMQ 519
Query: 731 MEEGKMFIDKYKYRTLFLKYHKTLYKGKTPKFQTEAQLK 769
+ + + D Y L + K K E QLK
Sbjct: 520 LADSGVVPDIMTYNVLINGFCKAKNINGAFKLFRELQLK 558
Score = 49.7 bits (117), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 53/242 (21%), Positives = 94/242 (38%), Gaps = 17/242 (7%)
Query: 447 LQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQ 506
++P +Y L++ F E G + L + L S D +I +G LD+
Sbjct: 337 IEPDVVLYTILIRGFCEVGMVDYALNMLNDMTQRGL--SPDTYCYNALIKGFCDVGLLDK 394
Query: 507 AHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQ 566
A L E+ +S Y L+ E + + G + AL+
Sbjct: 395 ARSLQLEISKNDCFPTSCTYTILICGMCRNGLLDEARQIFNQMENLGCSPSIMTFNALID 454
Query: 567 SKIVQKDTPGALHLFKEMKESKIP----RSGHQEFEMLVKGCAQNH-----EAGLMAK-- 615
+ A HLF +M+ K P R ++ Q E+GL+ K
Sbjct: 455 GLCKAGELEEARHLFYKMEIGKNPSLFLRLSQGADRVMDTASLQTMVERLCESGLILKAY 514
Query: 616 --LLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVT 673
L+Q G D + +N +I+ FCK + + A K + ++ GH P++ T+ +++
Sbjct: 515 KLLMQLADSGVVPD--IMTYNVLINGFCKAKNINGAFKLFRELQLKGHSPDSVTYGTLID 572
Query: 674 GY 675
G+
Sbjct: 573 GF 574
>gi|224086982|ref|XP_002308024.1| predicted protein [Populus trichocarpa]
gi|222854000|gb|EEE91547.1| predicted protein [Populus trichocarpa]
Length = 789
Score = 60.1 bits (144), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 57/241 (23%), Positives = 97/241 (40%), Gaps = 11/241 (4%)
Query: 442 TEHGILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISL 501
T+ GIL P Y ++ + + + K + V D ++ L
Sbjct: 223 TQRGIL-PDAFTYCVVISGLCRSKRVDDAYRLFDKMKDSG--VGPDFVTCNALLNGFCML 279
Query: 502 GWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCY 561
+D+A LL G Y+ L++ A R +V L R ++ D Y
Sbjct: 280 DRVDEAFSLLRLFEKDGYVLDVRGYSCLIRGLFRAKRYEDVQLLYRKMIEDNVKPDVYLY 339
Query: 562 EALLQSKIVQKDTPGALHLFKEMKESKI-PRSGHQEFEMLVKGCAQNHEAGLMAKLLQEV 620
+++ AL L EM ES + P + + +L+KG + GL+++
Sbjct: 340 TIMMKGLAEAGKVRDALELLNEMTESGVVPDTVC--YNVLIKGFC---DMGLLSEARSLQ 394
Query: 621 KEGQRIDC--GVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAI 678
E R DC V ++ +I C+ L +DA++ M LG P+A TF+S++ G
Sbjct: 395 LEISRHDCFPNVKTYSILISGMCRNGLTRDAQEIFNEMEKLGCYPSAVTFNSLIDGLCKT 454
Query: 679 G 679
G
Sbjct: 455 G 455
Score = 41.2 bits (95), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 50/241 (20%), Positives = 91/241 (37%), Gaps = 17/241 (7%)
Query: 447 LQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQ 506
++P +Y ++K EAGK ++ L E V D +I +G L +
Sbjct: 332 VKPDVYLYTIMMKGLAEAGKVRDALELL--NEMTESGVVPDTVCYNVLIKGFCDMGLLSE 389
Query: 507 AHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQ 566
A L E+ + Y+ L+ R+ + + G A + +L+
Sbjct: 390 ARSLQLEISRHDCFPNVKTYSILISGMCRNGLTRDAQEIFNEMEKLGCYPSAVTFNSLID 449
Query: 567 SKIVQKDTPGALHLFKEMKESKIPR---------SGHQEFEMLVKGCAQNHEAGLMAK-- 615
A LF +M+ + P S + L K Q ++GL+ K
Sbjct: 450 GLCKTGQLEKAHLLFYKMEIGRNPSLFLRLSQGPSHVLDSASLQKMVEQLCDSGLIHKAY 509
Query: 616 --LLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVT 673
L+Q G G++ +N +++ FCK A K + M+ G P+ T+ +++
Sbjct: 510 RILMQLADSGDAP--GIYTYNILVNGFCKLGNFNGAYKLFREMQFKGLSPDTVTYGTLIN 567
Query: 674 G 674
G
Sbjct: 568 G 568
>gi|218200855|gb|EEC83282.1| hypothetical protein OsI_28637 [Oryza sativa Indica Group]
Length = 662
Score = 60.1 bits (144), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 88/195 (45%), Gaps = 7/195 (3%)
Query: 500 SLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDAS 559
+LG +++ LLD+M G++ Y +++ + +A R+ L + G++ +
Sbjct: 321 NLGKMEETFHLLDQMKTEGLQPDIVSYGTIIDGHCKAKDIRKAKEYLTELMDRGLKPNVF 380
Query: 560 CYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLM--AKLL 617
Y AL+ D GA+ + MK + I + ++ C AGL+ AK +
Sbjct: 381 IYNALIGGYGRNGDISGAIDAVETMKSNGIQPTNVTYGSLMYWMC----HAGLVEEAKTI 436
Query: 618 QEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAA 677
+D GV + +I +CK M +A + MRS G PN T+ +++ Y+
Sbjct: 437 FSQARENNVDLGVIGYTIMIQGYCKLGKMVEAVAYFEEMRSRGISPNKLTYTTLMYAYSK 496
Query: 678 IGGKYTEVTELWGEM 692
G E ++L+ EM
Sbjct: 497 -SGNSEEASKLFDEM 510
>gi|115453829|ref|NP_001050515.1| Os03g0569800 [Oryza sativa Japonica Group]
gi|113548986|dbj|BAF12429.1| Os03g0569800 [Oryza sativa Japonica Group]
Length = 773
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 85/192 (44%), Gaps = 5/192 (2%)
Query: 502 GWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCY 561
G ++ H++L +M G +YA+++ + +L S G++ + CY
Sbjct: 265 GLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCY 324
Query: 562 EALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQE-V 620
+L+ + A L EM + P F +LV QN + +LL++ +
Sbjct: 325 NTVLKGLCSAERWKEAEELLSEMFQKDCPLD-DVTFNILVDFFCQNGLVDRVIELLEQML 383
Query: 621 KEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGG 680
G D V + VI+ FCK+ L+ +A LK M S G PN ++ ++ G + G
Sbjct: 384 SHGCMPD--VITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCS-AG 440
Query: 681 KYTEVTELWGEM 692
++ + EL +M
Sbjct: 441 RWVDAEELMSQM 452
Score = 49.3 bits (116), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 59/289 (20%), Positives = 108/289 (37%), Gaps = 47/289 (16%)
Query: 447 LQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQ 506
L+P Y ++K A + KE L + +++ + DD ++ G +D+
Sbjct: 317 LKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPL--DDVTFNILVDFFCQNGLVDR 374
Query: 507 AHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQ 566
+LL++M G Y +++ + + E LL+ S G + + Y +L+
Sbjct: 375 VIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLK 434
Query: 567 SKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRI 626
A L +M + +GC N
Sbjct: 435 GLCSAGRWVDAEELMSQMIQ---------------QGCPPNPVT---------------- 463
Query: 627 DCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVT 686
+N +I+F CKK L++ A + LK+M G P+ ++ +++ G GK E
Sbjct: 464 ------FNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGK-AGKTEEAL 516
Query: 687 ELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGK 735
EL M + S + + S+ R G R N+V+ M + K
Sbjct: 517 ELLNVMVNKGISP----NTIIYSSIACALSREG---RVNKVIQMFDNIK 558
Score = 47.4 bits (111), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 64/310 (20%), Positives = 117/310 (37%), Gaps = 17/310 (5%)
Query: 447 LQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVI--TLCISLGWL 504
+ P + +V+ G+ + L ++ + + + HVI C S G+
Sbjct: 107 VPPNAYTFFPVVRGLCTRGRIADALEVL---DEMSFKGCAPIPPMYHVILEAACRSGGFR 163
Query: 505 DQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEAL 564
+ +L+ MH G + +L A E E LLR G + D Y A+
Sbjct: 164 NSVR-VLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAV 222
Query: 565 LQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQ 624
L+ + K L EM F L+ +N GL ++ + + +
Sbjct: 223 LKGLCMAKRWGDVEELMDEMVRVDC-APNIVTFNTLIGYLCRN---GLFERVHEVLAQMS 278
Query: 625 RIDC--GVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKY 682
C + + +I CK+ ++ A + L RM S G PN +++++ G + ++
Sbjct: 279 EHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCS-AERW 337
Query: 683 TEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFIDKYK 742
E EL EM F + D+ + ++ F + G R E++ M D
Sbjct: 338 KEAEELLSEM--FQKDCPL--DDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVIT 393
Query: 743 YRTLFLKYHK 752
Y T+ + K
Sbjct: 394 YTTVINGFCK 403
Score = 39.3 bits (90), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 55/119 (46%), Gaps = 1/119 (0%)
Query: 502 GWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCY 561
G ++A +LL+ M G+ ++ +Y+S+ A R +V + + + I+ DA Y
Sbjct: 510 GKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLY 569
Query: 562 EALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEV 620
A++ S + +T A+ F M + + ML+KG A A +LL E+
Sbjct: 570 NAVISSLCKRWETDRAIDFFAYMVSNGC-MPNESTYTMLIKGLASEGLAKEAQELLSEL 627
>gi|12583808|gb|AAG59660.1|AC084319_18 putative membrane-associated salt-inducible protein [Oryza sativa
Japonica Group]
Length = 772
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 85/192 (44%), Gaps = 5/192 (2%)
Query: 502 GWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCY 561
G ++ H++L +M G +YA+++ + +L S G++ + CY
Sbjct: 265 GLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCY 324
Query: 562 EALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQE-V 620
+L+ + A L EM + P F +LV QN + +LL++ +
Sbjct: 325 NTVLKGLCSAERWKEAEELLSEMFQKDCPLD-DVTFNILVDFFCQNGLVDRVIELLEQML 383
Query: 621 KEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGG 680
G D V + VI+ FCK+ L+ +A LK M S G PN ++ ++ G + G
Sbjct: 384 SHGCMPD--VITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCS-AG 440
Query: 681 KYTEVTELWGEM 692
++ + EL +M
Sbjct: 441 RWVDAEELMSQM 452
Score = 48.9 bits (115), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 59/289 (20%), Positives = 108/289 (37%), Gaps = 47/289 (16%)
Query: 447 LQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQ 506
L+P Y ++K A + KE L + +++ + DD ++ G +D+
Sbjct: 317 LKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPL--DDVTFNILVDFFCQNGLVDR 374
Query: 507 AHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQ 566
+LL++M G Y +++ + + E LL+ S G + + Y +L+
Sbjct: 375 VIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLK 434
Query: 567 SKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRI 626
A L +M + +GC N
Sbjct: 435 GLCSAGRWVDAEELMSQMIQ---------------QGCPPNPVT---------------- 463
Query: 627 DCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVT 686
+N +I+F CKK L++ A + LK+M G P+ ++ +++ G GK E
Sbjct: 464 ------FNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGK-AGKTEEAL 516
Query: 687 ELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGK 735
EL M + S + + S+ R G R N+V+ M + K
Sbjct: 517 ELLNVMVNKGISP----NTIIYSSIACALSREG---RVNKVIQMFDNIK 558
Score = 47.4 bits (111), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 60/264 (22%), Positives = 103/264 (39%), Gaps = 14/264 (5%)
Query: 493 HVI--TLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDAR 550
HVI C S G+ + +L+ MH G + +L A E E LLR
Sbjct: 150 HVILEAACRSGGFRNSVR-VLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLA 208
Query: 551 SAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEA 610
G + D Y A+L+ + K L EM + F L+ +N
Sbjct: 209 FFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPN-IVTFNTLIGYLCRN--- 264
Query: 611 GLMAKLLQEVKEGQRIDC--GVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTF 668
GL ++ + + + C + + +I CK+ ++ A + L RM S G PN +
Sbjct: 265 GLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCY 324
Query: 669 HSMVTGYAAIGGKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVV 728
++++ G + ++ E EL EM F + D+ + ++ F + G R E++
Sbjct: 325 NTVLKGLCS-AERWKEAEELLSEM--FQKDCPL--DDVTFNILVDFFCQNGLVDRVIELL 379
Query: 729 AMMEEGKMFIDKYKYRTLFLKYHK 752
M D Y T+ + K
Sbjct: 380 EQMLSHGCMPDVITYTTVINGFCK 403
Score = 39.7 bits (91), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 55/119 (46%), Gaps = 1/119 (0%)
Query: 502 GWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCY 561
G ++A +LL+ M G+ ++ +Y+S+ A R +V + + + I+ DA Y
Sbjct: 510 GKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLY 569
Query: 562 EALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEV 620
A++ S + +T A+ F M + + ML+KG A A +LL E+
Sbjct: 570 NAVISSLCKRWETDRAIDFFAYMVSNGC-MPNESTYTMLIKGLASEGLAKEAQELLSEL 627
>gi|356557791|ref|XP_003547194.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic-like [Glycine max]
Length = 793
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 56/246 (22%), Positives = 107/246 (43%), Gaps = 6/246 (2%)
Query: 435 KQVELITTEHGILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHV 494
++V + T GI P E +V ++ AGK + L +K ++ S +
Sbjct: 220 RRVLRLMTRRGIECPPEAFGYVMV-SYSRAGKLRNALRVLTLMQKAGVEPSL--SICNTT 276
Query: 495 ITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGI 554
I + + G L++A L+ M + G++ Y SL+K Y + NR + L+ S G
Sbjct: 277 IYVLVKGGKLEKALKFLERMQVTGIKPDIVTYNSLIKGYCDLNRIEDALELIAGLPSKGC 336
Query: 555 QLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMA 614
D Y ++ +K L ++M + + L+ +++ A
Sbjct: 337 PPDKVSYYTVMGFLCKEKKIEEVKCLMEKMVWNSNLIPDQVTYNTLIHMLSKHGHADDAL 396
Query: 615 KLLQEVKE-GQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVT 673
L+E ++ G ID ++ ++H FC+K M +A+ + M S G P+ T+ ++V
Sbjct: 397 AFLKEAQDKGFHID--KVGYSAIVHSFCQKGRMDEAKSLVIDMYSRGCNPDVVTYTAIVD 454
Query: 674 GYAAIG 679
G+ +G
Sbjct: 455 GFCRLG 460
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 64/297 (21%), Positives = 130/297 (43%), Gaps = 21/297 (7%)
Query: 454 YIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQAHDLLDE 513
Y +V +F + G+ E +I + D ++ LG +D+A +L +
Sbjct: 414 YSAIVHSFCQKGRMDEAKSLVIDMYSRG--CNPDVVTYTAIVDGFCRLGRIDEAKKILQQ 471
Query: 514 MHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQKD 573
M+ G + ++ Y +LL + + E ++ + +A Y A++ +
Sbjct: 472 MYKHGCKPNTVSYTALLNGLCHSGKSLEAREMINVSEEHWWTPNAITYGAVMHGLRREGK 531
Query: 574 TPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQE-VKEGQRIDCGVHD 632
A L +EM E + E +L++ QN + K L+E + +G I+ V +
Sbjct: 532 LSEACDLTREMVEKGFFPTP-VEINLLIQSLCQNQKVVEAKKYLEECLNKGCAIN--VVN 588
Query: 633 WNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIG--GKYTEVTELWG 690
+ VIH FC+ M+ A L M G P+A T+ ++ + A+G G+ E EL
Sbjct: 589 FTTVIHGFCQIGDMEAALSVLDDMYLSGKHPDAVTYTAL---FDALGKKGRLDEAAELIV 645
Query: 691 EMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFIDKYKYRTLF 747
+M S ++ SV++ + + G R ++++ ++E+ + + +RT++
Sbjct: 646 KM----LSKGLDPTPVTYRSVIHRYSQWG---RVDDMLNLLEK---MLKRQPFRTVY 692
>gi|326510773|dbj|BAJ91734.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 711
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 93/230 (40%), Gaps = 16/230 (6%)
Query: 502 GWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCY 561
G +D+A +L EM G+ Y++L+ A R + G+Q + Y
Sbjct: 305 GMMDEAMLILSEMQGQGLSPDVFTYSTLISALCRMGRLADAVDKFNQMIGTGVQPNTVVY 364
Query: 562 EALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVK 621
+L+Q D A L EM + IPR F +V + + VK
Sbjct: 365 HSLIQGFCTHGDLVKAKELVYEMMNNGIPRPNIAFFNSIVHSICKEGRVMDAHHIFDLVK 424
Query: 622 E-GQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGG 680
+ G+R D + +N +I +C M A L M S G P+ T++++V GY G
Sbjct: 425 DIGERSD--IIMFNTLIDGYCLVGEMGKAFSVLDAMISAGIGPDTFTYNTLVNGYFK-SG 481
Query: 681 KYTEVTELWGEMKSFASSTSMNFDEEL-LDSVLYTFVRGGFFARANEVVA 729
+ + L+ EM D+++ +V Y + G F RA VA
Sbjct: 482 RIDDGLNLFREMS----------DKKIKPTTVTYNIILDGLF-RAGRTVA 520
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 84/179 (46%), Gaps = 6/179 (3%)
Query: 517 AGVRASSSVYASLLKAYIEANRPRE-VTALLRDARSAGIQLDASCYEALLQSKIVQKDTP 575
G++A + ++LK R + V LLR G DA Y +L+ +
Sbjct: 37 TGLKADKTAANTVLKCLCCTKRTDDAVKVLLRRMTELGCVPDAFSYAIVLKRLCDDNRSQ 96
Query: 576 GALHLFKEM-KESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEV-KEGQRIDCGVHDW 633
AL L + M KE + + ++ G + + G L E+ ++G D H
Sbjct: 97 QALDLLRMMAKEEGVCSPDVVTYNTVIHGFFKEGKIGKACNLYHEMMQQGFVPDVVTH-- 154
Query: 634 NNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEM 692
N++I+ CK R + +AE L++M G PN T+ SM+ GY+ + G++ E T+++ EM
Sbjct: 155 NSIINALCKARAVDNAELLLRQMVDNGVPPNKVTYTSMIHGYSTL-GRWEEATKMFREM 212
Score = 43.1 bits (100), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 50/246 (20%), Positives = 97/246 (39%), Gaps = 10/246 (4%)
Query: 431 GMLQKQVELI--TTEHGILQPTEKIYIKLVKAFLEAGKTKELTHF--LIKAEKENLQVSH 486
G L K EL+ +GI +P + +V + + G+ + H L+K E
Sbjct: 375 GDLVKAKELVYEMMNNGIPRPNIAFFNSIVHSICKEGRVMDAHHIFDLVKDIGER----S 430
Query: 487 DDAALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALL 546
D +I +G + +A +LD M AG+ + Y +L+ Y ++ R + L
Sbjct: 431 DIIMFNTLIDGYCLVGEMGKAFSVLDAMISAGIGPDTFTYNTLVNGYFKSGRIDDGLNLF 490
Query: 547 RDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQ 606
R+ I+ Y +L T A + EM S + +++KG +
Sbjct: 491 REMSDKKIKPTTVTYNIILDGLFRAGRTVAAQKMLHEMIGCGTTVS-LPTYNIILKGLCR 549
Query: 607 NHEAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQ 666
N+ + Q++ + + N +I+ + ++A+ + G +PNA
Sbjct: 550 NNCTDEAIVMFQKLCT-MNVKFNITTLNTMINSMYTVQRREEAKDLFSAISDSGLVPNAS 608
Query: 667 TFHSMV 672
T+ M+
Sbjct: 609 TYGIMI 614
Score = 41.2 bits (95), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 49/249 (19%), Positives = 106/249 (42%), Gaps = 19/249 (7%)
Query: 506 QAHDLLDEM-HLAGVRASSSV-YASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEA 563
QA DLL M GV + V Y +++ + + + + L + G D + +
Sbjct: 97 QALDLLRMMAKEEGVCSPDVVTYNTVIHGFFKEGKIGKACNLYHEMMQQGFVPDVVTHNS 156
Query: 564 LLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEG 623
++ + + A L ++M ++ +P + + ++ G + K+ +E+ G
Sbjct: 157 IINALCKARAVDNAELLLRQMVDNGVPPN-KVTYTSMIHGYSTLGRWEEATKMFREMT-G 214
Query: 624 QRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYT 683
+ + + WN+ + CK ++A + M + GH PN T+ ++ GYA G
Sbjct: 215 RGLIPDIVSWNSFMDSLCKHGRSKEAAEIFYSMAAKGHRPNIVTYGILLHGYATEG---- 270
Query: 684 EVTELWGEMKSFASSTSMNFDEELLDSVLYT-----FVRGGFFARANEVVAMMEEGKMFI 738
+ +M SF + +M D + + +++T + + G A +++ M+ +
Sbjct: 271 ----CFADMMSFFN--TMKGDGIVANCLVFTILIDAYAKRGMMDEAMLILSEMQGQGLSP 324
Query: 739 DKYKYRTLF 747
D + Y TL
Sbjct: 325 DVFTYSTLI 333
>gi|357477565|ref|XP_003609068.1| hypothetical protein MTR_4g108600 [Medicago truncatula]
gi|355510123|gb|AES91265.1| hypothetical protein MTR_4g108600 [Medicago truncatula]
Length = 932
Score = 59.7 bits (143), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 59/264 (22%), Positives = 103/264 (39%), Gaps = 39/264 (14%)
Query: 451 EKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQAHDL 510
E +Y++ ++ + GK +E + + N S + ++ + + G+ +QAH +
Sbjct: 155 EGVYVEAMRFYGRKGKIQEAVDTFERMDLFNCDPSV--YSYNAIMNILVEFGYFNQAHKV 212
Query: 511 LDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIV 570
M V + Y +K++ RP LLR+ G +A Y ++
Sbjct: 213 YMRMKDKKVESDVYTYTIRIKSFCRTGRPYAALRLLRNMPVLGCFSNAVAYCTVVTGFYE 272
Query: 571 QKDTPGALHLFKEMKE------------------------------SKIPRSGHQ----E 596
D A LF EM E K+ + G
Sbjct: 273 FGDNDRARELFDEMLECCLCPDVTTFNKLVHALCKKGFVLESERLFDKVLKRGVCPNLFT 332
Query: 597 FEMLVKGCAQNHEAGLMAKLLQEV-KEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKR 655
F + ++G + +LL V +EG R D V +N VI C+K + +AE+ L +
Sbjct: 333 FNIFIQGLCKEGSLDRAVRLLGCVSREGLRPD--VVTYNTVICGLCRKSRVVEAEECLHK 390
Query: 656 MRSLGHLPNAQTFHSMVTGYAAIG 679
M + G PN T++S++ GY G
Sbjct: 391 MVNGGFEPNDFTYNSIIDGYCKKG 414
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 74/173 (42%), Gaps = 6/173 (3%)
Query: 506 QAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALL 565
+A + L +M G + Y S++ Y + + +L+DA G + D Y +L+
Sbjct: 383 EAEECLHKMVNGGFEPNDFTYNSIIDGYCKKGMVVDANRILKDAVFKGFKPDEFTYCSLV 442
Query: 566 QSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQR 625
D A+ +FK+ K R + L+KG Q GL+ LQ + E
Sbjct: 443 NGFCQDGDPDQAMAVFKD-GLGKGLRPSIIVYNTLIKGLCQQ---GLILPALQLMNEMAE 498
Query: 626 IDCGVHDW--NNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYA 676
C W N +I+ CK + DA + + G +P+ T++++V GY
Sbjct: 499 KGCKPDIWTYNLIINGLCKMGCLSDANHLIGDAITKGCIPDIFTYNTLVDGYC 551
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 61/319 (19%), Positives = 109/319 (34%), Gaps = 43/319 (13%)
Query: 447 LQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQ 506
L+P+ +Y L+K + G L + E D +I +G L
Sbjct: 466 LRPSIIVYNTLIKGLCQQGLI--LPALQLMNEMAEKGCKPDIWTYNLIINGLCKMGCLSD 523
Query: 507 AHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQ 566
A+ L+ + G Y +L+ Y + L+ S G+ D Y LL
Sbjct: 524 ANHLIGDAITKGCIPDIFTYNTLVDGYCRQLKLDSAIELVNRMWSQGMTPDVITYNTLLN 583
Query: 567 SKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRI 626
+ + +FK M E KGCA N
Sbjct: 584 GLCKTAKSEEVMEIFKAMTE---------------KGCAPN------------------- 609
Query: 627 DCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVT 686
+ +N +I C + + +A L M+S G P+ +F +++TG+ +G ++
Sbjct: 610 ---IITYNTIIESLCNSKKVNEAVDLLGEMKSKGLTPDVVSFGTLITGFCKVG----DLD 662
Query: 687 ELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFIDKYKYRTL 746
+G + ++ + ++ F A + + M++ D Y YR L
Sbjct: 663 GAYGLFRGMEKQYDVSHTTATYNIIISAFSEQLNMKMALRLFSEMKKNGCDPDNYTYRVL 722
Query: 747 FLKYHKTLYKGKTPKFQTE 765
+ KT + KF E
Sbjct: 723 IDGFCKTGNVNQGYKFLLE 741
Score = 40.0 bits (92), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 51/253 (20%), Positives = 98/253 (38%), Gaps = 9/253 (3%)
Query: 444 HGILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGW 503
+G +P + Y ++ + + G + L A + + D+ ++ G
Sbjct: 393 NGGFEPNDFTYNSIIDGYCKKGMVVDANRILKDAVFKGFK--PDEFTYCSLVNGFCQDGD 450
Query: 504 LDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEA 563
DQA + + G+R S VY +L+K + L+ + G + D Y
Sbjct: 451 PDQAMAVFKDGLGKGLRPSIIVYNTLIKGLCQQGLILPALQLMNEMAEKGCKPDIWTYNL 510
Query: 564 LLQSKIVQKDTPGALHLFKE-MKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEV-K 621
++ A HL + + + IP + LV G + + +L+ +
Sbjct: 511 IINGLCKMGCLSDANHLIGDAITKGCIPDI--FTYNTLVDGYCRQLKLDSAIELVNRMWS 568
Query: 622 EGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGK 681
+G D V +N +++ CK ++ + K M G PN T+++++ K
Sbjct: 569 QGMTPD--VITYNTLLNGLCKTAKSEEVMEIFKAMTEKGCAPNIITYNTIIESLCN-SKK 625
Query: 682 YTEVTELWGEMKS 694
E +L GEMKS
Sbjct: 626 VNEAVDLLGEMKS 638
>gi|225437600|ref|XP_002271180.1| PREDICTED: pentatricopeptide repeat-containing protein At2g31400,
chloroplastic [Vitis vinifera]
Length = 867
Score = 59.7 bits (143), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 64/262 (24%), Positives = 110/262 (41%), Gaps = 14/262 (5%)
Query: 454 YIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQAHDLLDE 513
Y L+ A + G+ F I +E + + VI G LD+A +L +E
Sbjct: 329 YNTLLDAVCKGGQMD--LAFQIMSEMPRKHIMPNVVTYSTVIDGYAKAGRLDEALNLFNE 386
Query: 514 MHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQKD 573
M A + Y +LL Y + R E + ++ S+GI+ DA Y ALL Q
Sbjct: 387 MKFASIGLDRVSYNTLLSIYAKLGRFEEALNVCKEMESSGIKKDAVTYNALLGGYGKQGK 446
Query: 574 TPGALHLFKEMKESKI-PR--SGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQR--IDC 628
+F+EMK +I P + ++ KG GL + ++ +E ++ +
Sbjct: 447 YEEVKRVFEEMKAERIFPNLLTYSTLIDVYSKG-------GLYQEAMEVFREFKKAGLKA 499
Query: 629 GVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTEL 688
V ++ +I CK L++ A L M G PN T++S++ + G +
Sbjct: 500 DVVLYSALIDALCKNGLVESAVSFLDEMTKEGIRPNVVTYNSIIDAFGRSGSAECVIDPP 559
Query: 689 WGEMKSFASSTSMNFDEELLDS 710
+ S SS+S+ E+ +S
Sbjct: 560 YETNVSKMSSSSLKVVEDATES 581
Score = 52.8 bits (125), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 58/260 (22%), Positives = 110/260 (42%), Gaps = 8/260 (3%)
Query: 494 VITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAG 553
+I++ LG ++ A ++ + G + +++L+ AY + E + +S+G
Sbjct: 191 MISILGRLGQVELAKNVFETALNEGYGNTVYAFSALISAYGRSGYCDEAIKVFETMKSSG 250
Query: 554 IQLDASCYEALLQS-KIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGL 612
++ + Y A++ + D A +F EM + + + F L+ C +
Sbjct: 251 LKPNLVTYNAVIDACGKGGVDFNRAAEIFDEMLRNGV-QPDRITFNSLLAVCGRGGLWEA 309
Query: 613 MAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMV 672
L E+ + I+ + +N ++ CK M A + + M +PN T+ +++
Sbjct: 310 ARNLFSEMLY-RGIEQDIFTYNTLLDAVCKGGQMDLAFQIMSEMPRKHIMPNVVTYSTVI 368
Query: 673 TGYAAIGGKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMME 732
GYA G+ E L+ EMK FA S+ D +++L + + G F A V ME
Sbjct: 369 DGYAK-AGRLDEALNLFNEMK-FA---SIGLDRVSYNTLLSIYAKLGRFEEALNVCKEME 423
Query: 733 EGKMFIDKYKYRTLFLKYHK 752
+ D Y L Y K
Sbjct: 424 SSGIKKDAVTYNALLGGYGK 443
>gi|414591144|tpg|DAA41715.1| TPA: hypothetical protein ZEAMMB73_506058 [Zea mays]
Length = 521
Score = 59.7 bits (143), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 80/186 (43%), Gaps = 9/186 (4%)
Query: 497 LCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQL 556
LC S G +D A LLD+M GV ++ Y SLL Y+ V +L + GI+
Sbjct: 141 LCKS-GRVDDARRLLDDMPRHGVSLNALCYNSLLDCYVRQKDDGRVQEILEIMENEGIEA 199
Query: 557 DASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLM--- 613
Y L+ S +D LF EMK + + + ++ C AG M
Sbjct: 200 TVGTYTILVDSLSTARDISKVEALFNEMKANNVVGDVYLYTAVINAYC----RAGNMRRA 255
Query: 614 AKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVT 673
AK+L E G ++ + +I FCK M+ AE L M+ G N F++M+
Sbjct: 256 AKVLDECV-GNGVEPNERTYGVLIKGFCKIGQMEAAEMLLADMQGQGVGLNQIIFNTMID 314
Query: 674 GYAAIG 679
GY G
Sbjct: 315 GYCRKG 320
>gi|302771776|ref|XP_002969306.1| hypothetical protein SELMODRAFT_61378 [Selaginella moellendorffii]
gi|300162782|gb|EFJ29394.1| hypothetical protein SELMODRAFT_61378 [Selaginella moellendorffii]
Length = 587
Score = 59.7 bits (143), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 68/282 (24%), Positives = 125/282 (44%), Gaps = 30/282 (10%)
Query: 449 PTEKIYIKLVKAFLEAGKTKE-LTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQA 507
P + Y L++ ++AG+ L+ + A++ V+++ ALG C G LD
Sbjct: 70 PVARTYEALIRVVMDAGQCDTALSVYRAMADR----VTYNLVALG-----CCRSGRLDTC 120
Query: 508 HDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQS 567
++ EM G R S + SL+ +A R E +L +R + +C +A+ S
Sbjct: 121 VEIYQEMRSRGFRVSHLAFNSLVCGLCKAGRTDEAWDVLGKSRPS------ACADAVTLS 174
Query: 568 KIVQ----KDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEG 623
++ D AL L + M+ ++P + ++ C M LLQ++
Sbjct: 175 TVIHALCSSDCDRALELMRAMQAQRVPPNVVTYTSVIDGLCKAGRRDAAMV-LLQQM--- 230
Query: 624 QRIDCGVHD--WNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTG---YAAI 678
Q C + +N +IH CK ++DA L+ M S G P+ +++V+G +A +
Sbjct: 231 QAAGCSPNTVTYNCLIHSLCKAGKLEDAFALLRGMPSKGCTPSINNKNTLVSGICKHAIM 290
Query: 679 GGKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGF 720
+ E +L + S A S + +E+ L ++ YT + F
Sbjct: 291 ERQRREFGKLGQALFSEAMQESYSVEEDTL-ALFYTCLEHMF 331
Score = 42.7 bits (99), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 61/279 (21%), Positives = 120/279 (43%), Gaps = 16/279 (5%)
Query: 386 NCTNSVDLEN---SGIIENHILSYE--DFTKDRKFVALEA--EVKRVLQTLLGMLQKQVE 438
CT S++ +N SGI ++ I+ + +F K + + EA E V + L + +E
Sbjct: 269 GCTPSINNKNTLVSGICKHAIMERQRREFGKLGQALFSEAMQESYSVEEDTLALFYTCLE 328
Query: 439 LITTEHGILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLC 498
+ +G +P ++ Y ++ +A K E K QV D +
Sbjct: 329 HMFGSNGD-RPDKRTYSIVIHFLCKADKVLEAARVWRAMVKRLGQV--DAVTYNSFLYGL 385
Query: 499 ISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDA 558
+ L L +A L E+ + + Y+ L+ AY +A +V + + A G++ D
Sbjct: 386 LKLNDLSEAARLFSEID----KPTLVSYSLLVHAYFKAGDLSKVEEVYQAATGQGLRPDL 441
Query: 559 SCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQ 618
+ Y +L K G HL+ EM + + S + +L+ +++ +++
Sbjct: 442 ALYNIVLHGLSGAKQEAGVAHLWAEMLNNGVSPS-VATYTILIHALCRDNRLQAARQIID 500
Query: 619 EVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMR 657
++K GQ + +N ++H CK L+ +A L+ M+
Sbjct: 501 KMK-GQGVLPDAITYNTLLHCLCKNELLDEARLLLREMK 538
>gi|308080398|ref|NP_001183938.1| PPR-814a [Zea mays]
gi|223929924|gb|ACN24620.1| PPR-814a [Zea mays]
Length = 814
Score = 59.7 bits (143), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 83/179 (46%), Gaps = 6/179 (3%)
Query: 518 GVRASSSVYASLLKAYIEANRPRE-VTALLRDARSAGIQLDASCYEALLQSKIVQKDTPG 576
G+R + LLK + EA R E + LL G D Y LL+S Q +
Sbjct: 141 GLRVDIIIANHLLKGFCEAKRTDEALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQ 200
Query: 577 ALHLFKEMKES-KIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQE-VKEGQRIDCGVHDWN 634
A L + M E + + ++ G + + L +E V+ G D ++
Sbjct: 201 ADDLLRMMAEGGAVCSPDVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPD--FVTYS 258
Query: 635 NVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEMK 693
+V+H CK R M AE L++M + G LPN T+++++ GY++ G++ E ++ EM+
Sbjct: 259 SVVHALCKARAMDKAEAFLRQMVNKGVLPNNWTYNNLIYGYSST-GQWKEAVRVFKEMR 316
Score = 52.8 bits (125), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 43/226 (19%), Positives = 92/226 (40%), Gaps = 4/226 (1%)
Query: 447 LQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQ 506
L PT +Y L+ + GK ++ ++ +D G ++ +G +D+
Sbjct: 530 LHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIE--PNDVVYGTLVNGYCKIGRIDE 587
Query: 507 AHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQ 566
L EM G++ S+ +Y ++ EA R + +GI ++ Y +L+
Sbjct: 588 GLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIVLR 647
Query: 567 SKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRI 626
+ A+ LFKE++ + + ++ G Q L + +
Sbjct: 648 GLFKNRCFDEAIFLFKELRAMNV-KIDIITLNTMIAGMFQTRRVEEAKDLFASISRSGLV 706
Query: 627 DCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMV 672
C V ++ +I K+ L+++AE M++ G P+++ + +V
Sbjct: 707 PC-VVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPDSRLLNHVV 751
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 84/365 (23%), Positives = 140/365 (38%), Gaps = 31/365 (8%)
Query: 398 IIENHILSYEDFTKDRKFVALEAEVKRVLQTLLGMLQKQVELITTEHGILQPTEKIYIKL 457
II NH+L + F E KR + L +L + EL P Y L
Sbjct: 147 IIANHLL--------KGF----CEAKRTDEALDILLHRTPELGCV------PDVFSYSIL 188
Query: 458 VKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQAHDLLDEMHLA 517
+K+ + GK+ + L + S D A VI G +++A DL EM
Sbjct: 189 LKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYNTVIDGFFKEGDVNKACDLFKEMVQR 248
Query: 518 GVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQKDTPGA 577
G+ Y+S++ A +A + A LR + G+ + Y L+ A
Sbjct: 249 GIPPDFVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPNNWTYNNLIYGYSSTGQWKEA 308
Query: 578 LHLFKEM-KESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVK-EGQRIDCGVHDWNN 635
+ +FKEM ++S +P F ML+ + + + + +GQ D V +N
Sbjct: 309 VRVFKEMRRQSILPDV--VTFNMLMGSLCKYGKIKEARDVFDTMAMKGQNPD--VFSYNI 364
Query: 636 VIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEMKSF 695
+++ + K + D M G P TF+ ++ YA G + ++ EM+
Sbjct: 365 MLNGYATKGCLVDMTDLFDLMLGDGIAPVICTFNVLIKAYANC-GMLDKAMIIFNEMRDH 423
Query: 696 ASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFIDKYKYRTLFLKY--HKT 753
++ +V+ R G A E M + + DKY Y L + H +
Sbjct: 424 GVKPNV----LTYTTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGS 479
Query: 754 LYKGK 758
L K K
Sbjct: 480 LLKAK 484
Score = 44.3 bits (103), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 92/439 (20%), Positives = 170/439 (38%), Gaps = 51/439 (11%)
Query: 257 NIALAGCLL--FETTRKAEQLLDIM----PRIGVKADSNLLIIMAHIYERNGRREELRKL 310
+I +A LL F ++ ++ LDI+ P +G D I+ G+ + L
Sbjct: 145 DIIIANHLLKGFCEAKRTDEALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDL 204
Query: 311 QRHIDE--AVNLSDIQFRQFYNCLLSCHLKFGDLNSASKMVLEMLQRAKE----ARNSLA 364
R + E AV D+ YN ++ K GD+N A + EM+QR +S+
Sbjct: 205 LRMMAEGGAVCSPDVVA---YNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDFVTYSSVV 261
Query: 365 AAMLPFNAVGVNNRTPSEQNVNCTNSVDLENSGIIENHILSYEDFTKDRKFVALEAEVKR 424
A+ A+ + N L N+ N I Y + ++ V + E++R
Sbjct: 262 HALCKARAMDKAEAFLRQM----VNKGVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRR 317
Query: 425 VLQTLLGMLQKQVELITTEHGILQPTEKIYIKLVKAFLEAGKTKELTHFL--IKAEKENL 482
Q++L P + L+ + + GK KE + + +N
Sbjct: 318 --QSIL------------------PDVVTFNMLMGSLCKYGKIKEARDVFDTMAMKGQNP 357
Query: 483 QVSHDDAALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREV 542
V + L T G L DL D M G+ + L+KAY +
Sbjct: 358 DVFSYNIMLNGYATK----GCLVDMTDLFDLMLGDGIAPVICTFNVLIKAYANCGMLDKA 413
Query: 543 TALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVK 602
+ + R G++ + Y ++ + A+ F +M + + + + L++
Sbjct: 414 MIIFNEMRDHGVKPNVLTYTTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYA-YHCLIQ 472
Query: 603 GCAQNHEAGLMAK-LLQEV-KEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLG 660
G H + L AK L+ E+ G +D + ++++I+ CK + DA+ ++G
Sbjct: 473 GFC-THGSLLKAKELISEIMNNGMHLD--IVLFSSIINNLCKLGRVMDAQNIFDLTVNVG 529
Query: 661 HLPNAQTFHSMVTGYAAIG 679
P A + ++ GY +G
Sbjct: 530 LHPTAVVYSMLMDGYCLVG 548
Score = 42.4 bits (98), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 62/258 (24%), Positives = 100/258 (38%), Gaps = 39/258 (15%)
Query: 502 GWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCY 561
G LD+A + +EM GV+ + Y +++ A + + G+ D Y
Sbjct: 408 GMLDKAMIIFNEMRDHGVKPNVLTYTTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAY 467
Query: 562 EALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVK 621
L+Q T G+L KE+ S+I +G +L N + KL V
Sbjct: 468 HCLIQGFC----THGSLLKAKELI-SEIMNNGMHLDIVLFSSIINN-----LCKL-GRVM 516
Query: 622 EGQRI-----DCGVHD----WNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMV 672
+ Q I + G+H ++ ++ +C M+ A + M S G PN + ++V
Sbjct: 517 DAQNIFDLTVNVGLHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNDVVYGTLV 576
Query: 673 TGYAAIGGKYTEVTELWGEM--KSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAM 730
GY I G+ E L+ EM K ST +LY + G F V A
Sbjct: 577 NGYCKI-GRIDEGLSLFREMLQKGIKPST-----------ILYNIIIDGLFEAGRTVPAK 624
Query: 731 -----MEEGKMFIDKYKY 743
M E + ++K Y
Sbjct: 625 VKFHEMTESGIAMNKCTY 642
>gi|147841962|emb|CAN63129.1| hypothetical protein VITISV_001456 [Vitis vinifera]
Length = 701
Score = 59.7 bits (143), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 54/231 (23%), Positives = 97/231 (41%), Gaps = 7/231 (3%)
Query: 448 QPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQA 507
P + Y ++ A+ AG +A E ++ D +I + G D
Sbjct: 243 HPDDVTYSAMIDAYGRAGNVDMALKLYDRARTEKWRI--DPVTFSTLIRIYGMSGNFDGC 300
Query: 508 HDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQS 567
++ +EM GV+ + +Y +LL A A RP + + ++ + G+QL Y ALL++
Sbjct: 301 LNVYEEMKALGVKPNLVIYNTLLDAMGRAKRPWQAKNIYKEMTNNGLQLSWGTYAALLRA 360
Query: 568 KIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRID 627
+ AL ++KEMKE + S + L+ CA A + +++K +
Sbjct: 361 YGRARYAEDALIVYKEMKEKGLELSVVL-YNTLLAMCADVGYTEEAAAIFEDMKSSG--N 417
Query: 628 CGVHDW--NNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYA 676
C W +++I + + +AE L M G PN S++ Y
Sbjct: 418 CMPDSWTFSSLITIYSCSGKVSEAEAMLNAMLEAGFEPNIFVLTSLIQCYG 468
>gi|32489924|emb|CAE05516.1| OSJNBa0038P21.9 [Oryza sativa Japonica Group]
Length = 825
Score = 59.7 bits (143), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 65/306 (21%), Positives = 122/306 (39%), Gaps = 17/306 (5%)
Query: 433 LQKQVELITT--EHGILQPTEKIYIKLVKAFLEAGKT---KELTHFLIKAEKENLQVSHD 487
L K ELI+ GI P K + ++ + G+ K++ +I + ++ +
Sbjct: 485 LVKAKELISDMLSKGIPPPCIKFFTSIINNLCKEGRVAEGKDVVDLIIHTGQRPNLITFN 544
Query: 488 DAALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLR 547
G+ + +G + +A LLD M GV Y +L+ Y + R + L R
Sbjct: 545 SLVDGYCL-----VGNMKEAVGLLDSMESVGVEPDIYTYNTLVDGYCKHGRIDDALTLFR 599
Query: 548 DARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQN 607
D + L + Y +L + T A +F EM ES + S H +L C N
Sbjct: 600 DMLHKRVTLTSVSYNIILHGLFQARRTIVAKEMFHEMIESGMAVSIHTYATVLGGLCRNN 659
Query: 608 HEAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQT 667
A +L E + + +N VI K Q+A++ + + G +P T
Sbjct: 660 CTDE--ANMLLEKLFSMNVKFDILTFNIVIRAMFKVGRRQEAKELFAAISTYGLVPTILT 717
Query: 668 FHSMVTGYAAIGGKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEV 727
+ M+T + + L+ M+ +S D +L+ ++ + G A+A
Sbjct: 718 YRVMITNLIK-EESFEDADNLFSSME----KSSCTPDSRILNEIIRMLLNKGEVAKAGNY 772
Query: 728 VAMMEE 733
++ +++
Sbjct: 773 LSKIDK 778
Score = 45.8 bits (107), Expect = 0.100, Method: Compositional matrix adjust.
Identities = 37/179 (20%), Positives = 72/179 (40%), Gaps = 4/179 (2%)
Query: 502 GWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCY 561
G +D+AHDL +M G+ + Y+SL+ + + +LR AG++ + Y
Sbjct: 238 GEVDKAHDLFYKMEEQGIMPNVVTYSSLINGLCKTKEMDKAERVLRQMVGAGVRPNNMTY 297
Query: 562 EALLQSKIVQKDTPGALHLFKEMKES-KIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEV 620
L+ ++ +FKEM S +P G+ + C V
Sbjct: 298 NCLIHGYSTSGMWKESVRVFKEMSSSLLVPDVGNCN-SFMTALCKHGRIKEARDIFDSMV 356
Query: 621 KEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIG 679
+G + D V + ++H + + + M G +P+ F++++ YA +G
Sbjct: 357 LKGPKPD--VISYGALLHGYATAGCIAGMDNLFNVMVCEGVVPDRHVFNTLINAYARLG 413
>gi|356561679|ref|XP_003549107.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g12775, mitochondrial-like [Glycine max]
Length = 750
Score = 59.7 bits (143), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 53/229 (23%), Positives = 99/229 (43%), Gaps = 6/229 (2%)
Query: 447 LQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQ 506
+ P Y LV F G KE L + + +N ++ D +I G +
Sbjct: 234 ISPNVVTYNALVYGFCIMGHLKEAFSLLNEMKLKN--INPDVCTFNTLIDALGKEGKMKA 291
Query: 507 AHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQ 566
A +L M A ++ Y SL+ Y N+ + + +G+ + Y ++
Sbjct: 292 AKIVLAVMMKACIKPDVVTYNSLIDGYFFLNKVKNAKYVFYSMAQSGVTPNVRTYTTMID 351
Query: 567 SKIVQKDTPGALHLFKEMK-ESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQR 625
+K A+ LF+EMK ++ IP + L+ G +NH L +++KE Q
Sbjct: 352 GLCKEKMVDEAMSLFEEMKYKNMIPDI--VTYTSLIDGLCKNHHLERAIALCKKMKE-QG 408
Query: 626 IDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTG 674
I V+ + ++ CK +++A++ +R+ G+ N QT++ M+ G
Sbjct: 409 IQPDVYSYTILLDALCKGGRLENAKEFFQRLLVKGYHLNVQTYNVMING 457
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 72/154 (46%), Gaps = 6/154 (3%)
Query: 597 FEMLVKGCAQNHEAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRM 656
+ L+ G + E +A+LL+++ EG + V +N +IH CK +L+ DA M
Sbjct: 171 YRTLINGLCKTGETKAVARLLRKL-EGHSVKPDVVMYNTIIHSLCKNKLLGDACDLYSEM 229
Query: 657 RSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFV 716
G PN T++++V G+ I G E L EMK ++N D ++++
Sbjct: 230 IVKGISPNVVTYNALVYGF-CIMGHLKEAFSLLNEMK----LKNINPDVCTFNTLIDALG 284
Query: 717 RGGFFARANEVVAMMEEGKMFIDKYKYRTLFLKY 750
+ G A V+A+M + + D Y +L Y
Sbjct: 285 KEGKMKAAKIVLAVMMKACIKPDVVTYNSLIDGY 318
Score = 53.5 bits (127), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 41/191 (21%), Positives = 80/191 (41%), Gaps = 3/191 (1%)
Query: 504 LDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEA 563
L +A +L M A ++ Y +L+ Y N + + G+ + CY
Sbjct: 522 LKEAKIVLAVMTKACIKPDVVTYGTLMDGYFLVNELKHAKYVFYSMAQMGVTPNVQCYTI 581
Query: 564 LLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEG 623
++ +K A+ LF+EMK + + L+ +NH LL+E+KE
Sbjct: 582 MIDGLCKKKTVDEAMSLFEEMKHKNM-FPNIVTYTSLIDALCKNHHLERAIALLKEMKE- 639
Query: 624 QRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYT 683
I V+ + ++ CK ++ A++ +R+ G+ N Q + +M+ G +
Sbjct: 640 HGIQPDVYSYTILLDGLCKSGRLEGAKEIFQRLLVKGYHLNVQVYTAMINELCK-AGLFD 698
Query: 684 EVTELWGEMKS 694
E +L +M+
Sbjct: 699 EALDLQXKMED 709
>gi|222628658|gb|EEE60790.1| hypothetical protein OsJ_14375 [Oryza sativa Japonica Group]
Length = 754
Score = 59.7 bits (143), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 65/306 (21%), Positives = 122/306 (39%), Gaps = 17/306 (5%)
Query: 433 LQKQVELITT--EHGILQPTEKIYIKLVKAFLEAGKT---KELTHFLIKAEKENLQVSHD 487
L K ELI+ GI P K + ++ + G+ K++ +I + ++ +
Sbjct: 414 LVKAKELISDMLSKGIPPPCIKFFTSIINNLCKEGRVAEGKDVVDLIIHTGQRPNLITFN 473
Query: 488 DAALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLR 547
G+ + +G + +A LLD M GV Y +L+ Y + R + L R
Sbjct: 474 SLVDGYCL-----VGNMKEAVGLLDSMESVGVEPDIYTYNTLVDGYCKHGRIDDALTLFR 528
Query: 548 DARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQN 607
D + L + Y +L + T A +F EM ES + S H +L C N
Sbjct: 529 DMLHKRVTLTSVSYNIILHGLFQARRTIVAKEMFHEMIESGMAVSIHTYATVLGGLCRNN 588
Query: 608 HEAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQT 667
A +L E + + +N VI K Q+A++ + + G +P T
Sbjct: 589 CTDE--ANMLLEKLFSMNVKFDILTFNIVIRAMFKVGRRQEAKELFAAISTYGLVPTILT 646
Query: 668 FHSMVTGYAAIGGKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEV 727
+ M+T + + L+ M+ +S D +L+ ++ + G A+A
Sbjct: 647 YRVMITNLIK-EESFEDADNLFSSME----KSSCTPDSRILNEIIRMLLNKGEVAKAGNY 701
Query: 728 VAMMEE 733
++ +++
Sbjct: 702 LSKIDK 707
Score = 45.8 bits (107), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 37/179 (20%), Positives = 72/179 (40%), Gaps = 4/179 (2%)
Query: 502 GWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCY 561
G +D+AHDL +M G+ + Y+SL+ + + +LR AG++ + Y
Sbjct: 167 GEVDKAHDLFYKMEEQGIMPNVVTYSSLINGLCKTKEMDKAERVLRQMVGAGVRPNNMTY 226
Query: 562 EALLQSKIVQKDTPGALHLFKEMKES-KIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEV 620
L+ ++ +FKEM S +P G+ + C V
Sbjct: 227 NCLIHGYSTSGMWKESVRVFKEMSSSLLVPDVGNCN-SFMTALCKHGRIKEARDIFDSMV 285
Query: 621 KEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIG 679
+G + D V + ++H + + + M G +P+ F++++ YA +G
Sbjct: 286 LKGPKPD--VISYGALLHGYATAGCIAGMDNLFNVMVCEGVVPDRHVFNTLINAYARLG 342
>gi|302756343|ref|XP_002961595.1| hypothetical protein SELMODRAFT_76510 [Selaginella moellendorffii]
gi|300170254|gb|EFJ36855.1| hypothetical protein SELMODRAFT_76510 [Selaginella moellendorffii]
Length = 603
Score = 59.7 bits (143), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 75/348 (21%), Positives = 131/348 (37%), Gaps = 56/348 (16%)
Query: 416 VALEAEVKRVLQTLLGMLQKQVELI--TTEHGILQPTEKIYIKLVKAFLEAGKTKELTHF 473
V ++A KR GML++ +LI E G + P Y ++ ++G+ +E
Sbjct: 85 VIIDASCKR------GMLEEACDLIKKMIEDGHV-PDVVTYNTVMDGLCKSGRVEE--AL 135
Query: 474 LIKAEKENLQVSHDDAALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAY 533
L+ E E L + + + +I +DQA + EM + S Y L+
Sbjct: 136 LLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEARDIPPDSWSYGILIDGL 195
Query: 534 IEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSG 593
+A + E L R +GI A Y ++ + AL LFK M+
Sbjct: 196 AKAGKLNEAYKLFRRMLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSMRS------- 248
Query: 594 HQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKAL 653
KGC + +N +I CK+ M +A + L
Sbjct: 249 --------KGCRPSR----------------------FTFNILIDAHCKRGKMDEAFRLL 278
Query: 654 KRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEMKSFASSTSMNFDEELLDSVLY 713
KRM GH+P+ T+ ++++G +I + + L +M ++ +++++
Sbjct: 279 KRMTDDGHVPDVVTYSTLISGLCSI-ARVDDARHLLEDMVKRQCKPTVVTQ----NTLIH 333
Query: 714 TFVRGGFFARANEVVAMMEEGKMFIDKYKYRTLFLKYHKTLYKGKTPK 761
+ G A EV+ M D Y TL H G+T +
Sbjct: 334 GLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLV---HGHCRAGQTER 378
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 55/240 (22%), Positives = 97/240 (40%), Gaps = 18/240 (7%)
Query: 448 QPTEKIYIKLVKAFLEAGKTKELTHFL---IKAEKENLQVSHDDAALGHVITLCISLGWL 504
+PT L+ +AG+ KE L + + + V+++ GH G
Sbjct: 322 KPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHC-----RAGQT 376
Query: 505 DQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEAL 564
++A +LL +M G+ + Y +L+ +ANR E + +S+G + Y AL
Sbjct: 377 ERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTAL 436
Query: 565 LQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQ 624
+ G L LF EM + I H + L ++ + ++L+E +E
Sbjct: 437 ILGFCSAGQVDGGLKLFGEMVCAGISPD-HVVYGTLAAELCKSGRSARALEILREGRESL 495
Query: 625 RIDCGVHDWNNVIHFFCKKRLMQDA--EKALKRMRSL---GHLPNAQTFHSMVTGYAAIG 679
R + W + ++ F L+ E AL +R + G LP + S+V G G
Sbjct: 496 RSEA----WGDEVYRFAVDGLLDAGKMEMALGFVRDMVRGGQLPAPERCASLVAGLCKSG 551
Score = 40.8 bits (94), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 52/225 (23%), Positives = 90/225 (40%), Gaps = 33/225 (14%)
Query: 483 QVSHDDAALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREV 542
VS D + G +I G L+ A DL ++ +GV S+ Y SL+ AN +
Sbjct: 5 NVSPDSWSYGILIDGLAKAGKLNDARDLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDA 64
Query: 543 TALLRDARSAG---------IQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSG 593
L D G + +DASC +L+ A L K+M E G
Sbjct: 65 RELFADMNRRGCPPSPVTYNVIIDASCKRGMLEE---------ACDLIKKMIE-----DG 110
Query: 594 H----QEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRIDCGVH--DWNNVIHFFCKKRLMQ 647
H + ++ G + +G + + L E +R+ C + N +I C++ +
Sbjct: 111 HVPDVVTYNTVMDGLCK---SGRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKID 167
Query: 648 DAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEM 692
A + M + P++ ++ ++ G A GK E +L+ M
Sbjct: 168 QACQVFHEMEARDIPPDSWSYGILIDGLAK-AGKLNEAYKLFRRM 211
>gi|359487106|ref|XP_002274114.2| PREDICTED: pentatricopeptide repeat-containing protein At1g80550,
mitochondrial-like [Vitis vinifera]
Length = 571
Score = 59.7 bits (143), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 47/220 (21%), Positives = 86/220 (39%), Gaps = 40/220 (18%)
Query: 451 EKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITL-CISLGWLDQAHD 509
E Y L+ A E E +K K+ V +DD + ++I +GW + +
Sbjct: 282 ETSYSNLIDALCEYKHVIEAEELFLKESKD--LVFNDDVKIYNIILRGWFKMGWWKKCRE 339
Query: 510 LLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKI 569
+EM GV S Y+ + ++ +P L ++ + GI+LD Y ++++
Sbjct: 340 FWEEMDRRGVCKSLYSYSIYMDIQCKSGKPWRAVKLYKEMKKKGIRLDVVAYNTVIRAIG 399
Query: 570 VQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRIDCG 629
+ + ++ +F+EMKE GC N
Sbjct: 400 LSEGVDFSIRVFREMKEV---------------GCEPN---------------------- 422
Query: 630 VHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFH 669
V +N +I C+ +++A +MR G+ PN T+H
Sbjct: 423 VVTYNTIIKLLCENGRIREAYGVFDQMREKGYAPNVITYH 462
>gi|115475728|ref|NP_001061460.1| Os08g0290000 [Oryza sativa Japonica Group]
gi|38175588|dbj|BAD01297.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|38175668|dbj|BAD01373.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113623429|dbj|BAF23374.1| Os08g0290000 [Oryza sativa Japonica Group]
gi|125602875|gb|EAZ42200.1| hypothetical protein OsJ_26764 [Oryza sativa Japonica Group]
Length = 806
Score = 59.7 bits (143), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 55/230 (23%), Positives = 99/230 (43%), Gaps = 20/230 (8%)
Query: 500 SLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDAS 559
+LG +++ LLD+M G++ Y +++ + +A R+ L + G++ +
Sbjct: 549 NLGKMEETFHLLDQMKTEGLQPDIVSYGTIIDGHCKAKDIRKAKEYLTELMDRGLKPNVF 608
Query: 560 CYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLM--AKLL 617
Y AL+ D GA+ + MK + I + ++ C AGL+ AK +
Sbjct: 609 IYNALIGGYGRNGDISGAIDAVETMKSNGIQPTNVTYGSLMYWMC----HAGLVEEAKTI 664
Query: 618 QEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAA 677
+D GV + +I +CK M +A + MRS G PN T+ +++ Y+
Sbjct: 665 FSQARENNVDLGVIGYTIMIQGYCKLGKMVEAVAYFEEMRSRGISPNKLTYTTLMYAYSK 724
Query: 678 IGGKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEV 727
G E ++L+ EM + D++ Y G AR +EV
Sbjct: 725 -SGNSEEASKLFDEMVGSGV---------IPDNITY----GTLIARCSEV 760
Score = 39.3 bits (90), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 78/181 (43%), Gaps = 21/181 (11%)
Query: 499 ISLGWLDQAHDLLDEMHLA-GVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLD 557
+ G LD A ++ DEM + V + Y +++KA +A + +L + AG+Q
Sbjct: 196 VRAGQLDAAREVFDEMRESRNVALNEYSYTAMIKALCKAGKVDAGFEMLAELWRAGLQPT 255
Query: 558 ASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLL 617
Y L+ + A L M++ + S F +L+ G A+ G + +L
Sbjct: 256 VVTYNVLMDALCKSGRVEEAFRLKGRMEQGGMTPS-VVTFGILINGLARGERFGEVGIVL 314
Query: 618 QEVKEGQRIDCGVHD----WNNVIHFFCKKRLMQDA-----EKALKRMRSLGHLPNAQTF 668
QE+++ GV +N +I + C+K A E LK+M+ P A T+
Sbjct: 315 QEMEQ-----LGVSPNEVIYNELIGWHCRKGHCSQALRLFDEMVLKKMK-----PTAVTY 364
Query: 669 H 669
+
Sbjct: 365 N 365
>gi|225457182|ref|XP_002280557.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74850,
chloroplastic [Vitis vinifera]
Length = 869
Score = 59.7 bits (143), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 111/495 (22%), Positives = 191/495 (38%), Gaps = 61/495 (12%)
Query: 247 IAMKPNTNTFNIALAGCLLFETT-RKAEQLLDIMPRIGVKADSNLLIIMAHIYERNGR-R 304
I KPN + + I + G L E K +++ D MP GV + + Y RNG+ +
Sbjct: 140 IWCKPNEHIYTI-MIGVLGREGLLEKCQEIFDEMPSHGVAPSVFSFTALINAYGRNGQYK 198
Query: 305 EELRKLQRHIDEAVNLSDIQFRQFYNCLLSCHLKFGDL-NSASKMVLEMLQRAKEARNSL 363
L L R E V+ S + + N L + +L ++M E +Q N+L
Sbjct: 199 SSLELLDRMKKERVSPSILTYNTVINSCARGGLDWEELLGLFAQMRHEGIQADIVTYNTL 258
Query: 364 AAAMLPFNAVGVNNRTPSEQNVNCTNSVDLENSGIIENHILSY----EDFTKDRKFVALE 419
+A R ++ ++ N G I I +Y E F K
Sbjct: 259 LSA--------CARRGLGDEAEMVFRTM---NEGGILPDITTYSYLVETFGK-------- 299
Query: 420 AEVKRVLQTLLGMLQKQVELIT-TEHGILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAE 478
L L+K EL+ E G P Y L++A ++G KE +
Sbjct: 300 ----------LNRLEKVSELLKEMESGGSFPDITSYNVLLEAHAQSGSIKEAMGVF--RQ 347
Query: 479 KENLQVSHDDAALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANR 538
+ + A ++ L G D DL EM ++ +++ Y L+ + E
Sbjct: 348 MQGAGCVPNAATYSILLNLYGRHGRYDDVRDLFLEMKVSNTEPNAATYNILINVFGEGGY 407
Query: 539 PREVTALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALH------LFKEMKESKIPRS 592
+EV L D ++ + YE L+ + G LH L ++ +P S
Sbjct: 408 FKEVVTLFHDMVEENVEPNMETYEGLIFAC-----GKGGLHEDAKKILLHMNEKGVVPSS 462
Query: 593 GHQEFEMLVKGCAQNHEAGLMA-KLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEK 651
+ G A +E L+A + EV ++ +N++I F K L +++E
Sbjct: 463 KAYTGVIEAYGQAALYEEALVAFNTMNEVGSKPTVET----YNSLIQMFAKGGLYKESEA 518
Query: 652 ALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEMKSFASSTSMNFDEELLDSV 711
L +M G N TF+ ++ + GG++ E + + EM+ + DE+ L++V
Sbjct: 519 ILLKMGQSGVARNRDTFNGVIEAFRQ-GGQFEEAIKAYVEME----KARCDPDEQTLEAV 573
Query: 712 LYTFVRGGFFARANE 726
L + G + E
Sbjct: 574 LSVYCFAGLVEESEE 588
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 89/443 (20%), Positives = 162/443 (36%), Gaps = 73/443 (16%)
Query: 255 TFNIALAGCLLFETTRKAEQLLDIMPRIGVKADSNLLIIMAHIYERNGRREELRKLQRHI 314
T+N L+ C +AE + M G+ D + + + R E++ +L + +
Sbjct: 254 TYNTLLSACARRGLGDEAEMVFRTMNEGGILPDITTYSYLVETFGKLNRLEKVSELLKEM 313
Query: 315 DEAVNLSDIQFRQFYNCLLSCHLKFGDLNSASKMVLEMLQRAKEARNSLAAAMLPFNAVG 374
+ + DI YN LL H + G + A V +Q A N+ ++L N G
Sbjct: 314 ESGGSFPDITS---YNVLLEAHAQSGSIKEAMG-VFRQMQGAGCVPNAATYSIL-LNLYG 368
Query: 375 VNNRTPSEQNVNCTNSVDLENSGIIENHILSYEDFTKDRKFVALEAEVKRVLQTLLGMLQ 434
+ R Y+D + + LE +V
Sbjct: 369 RHGR---------------------------YDDV----RDLFLEMKVSNT--------- 388
Query: 435 KQVELITTEHGILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHV 494
+P Y L+ F E G KE+ +EN++ + + +
Sbjct: 389 -------------EPNAATYNILINVFGEGGYFKEVVTLFHDMVEENVEPNME--TYEGL 433
Query: 495 ITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGI 554
I C G + A +L M+ GV SS Y +++AY +A E G
Sbjct: 434 IFACGKGGLHEDAKKILLHMNEKGVVPSSKAYTGVIEAYGQAALYEEALVAFNTMNEVGS 493
Query: 555 QLDASCYEALLQSKIVQKDTPGALH-----LFKEMKESKIPRSGHQEFEMLVKGCAQNHE 609
+ Y +L +Q G L+ + +M +S + R+ F +++ Q +
Sbjct: 494 KPTVETYNSL-----IQMFAKGGLYKESEAILLKMGQSGVARN-RDTFNGVIEAFRQGGQ 547
Query: 610 AGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFH 669
K E+ E R D V+ +C L++++E+ +++LG LP+ +
Sbjct: 548 FEEAIKAYVEM-EKARCDPDEQTLEAVLSVYCFAGLVEESEEQFGEIKALGILPSVMCYC 606
Query: 670 SMVTGYAAIGGKYTEVTELWGEM 692
M+ YA ++ + +L EM
Sbjct: 607 MMLAVYAK-ADRWDDAHQLLDEM 628
>gi|242054943|ref|XP_002456617.1| hypothetical protein SORBIDRAFT_03g039460 [Sorghum bicolor]
gi|241928592|gb|EES01737.1| hypothetical protein SORBIDRAFT_03g039460 [Sorghum bicolor]
Length = 410
Score = 59.7 bits (143), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 77/182 (42%), Gaps = 4/182 (2%)
Query: 502 GWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCY 561
G L A L + M G+ S + L+ Y +A + ++AG+Q Y
Sbjct: 157 GKLKDAAQLFEAMRREGIHPSMVTFNLLIDGYGKAGKMSNALHFFNQMKAAGLQPSVVTY 216
Query: 562 EALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEV- 620
L+ +D A+ F +MKE ++ + + +L+ A+ +E ++L E+
Sbjct: 217 NELIGGFCRARDIAHAIRAFSDMKERRLAPT-KVTYTILIGAFAKENEMDRAFEMLSEME 275
Query: 621 KEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGG 680
K G +D V + ++H C + M A K + M S G PN + M+ GY G
Sbjct: 276 KAGLEVD--VQSYGVLLHALCMEGKMMHARKLFQSMDSKGVKPNNVLYDMMIYGYGREGS 333
Query: 681 KY 682
Y
Sbjct: 334 SY 335
Score = 45.8 bits (107), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 46/220 (20%), Positives = 91/220 (41%), Gaps = 16/220 (7%)
Query: 447 LQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQ 506
+ P+ + L+ + +AGK HF + + LQ S V+T +G +
Sbjct: 174 IHPSMVTFNLLIDGYGKAGKMSNALHFFNQMKAAGLQPS--------VVTYNELIGGFCR 225
Query: 507 AHDL------LDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASC 560
A D+ +M + + Y L+ A+ + N +L + AG+++D
Sbjct: 226 ARDIAHAIRAFSDMKERRLAPTKVTYTILIGAFAKENEMDRAFEMLSEMEKAGLEVDVQS 285
Query: 561 YEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEV 620
Y LL + ++ A LF+ M +SK + + ++M++ G + + +L+ E+
Sbjct: 286 YGVLLHALCMEGKMMHARKLFQSM-DSKGVKPNNVLYDMMIYGYGREGSSYKALRLIMEM 344
Query: 621 KEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLG 660
++ I V + I C + Q+AE + M G
Sbjct: 345 RKSGLIP-NVASYCLTIRLLCNEGKCQEAEALIGDMEDAG 383
>gi|359473521|ref|XP_002273398.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g02150-like [Vitis vinifera]
Length = 755
Score = 59.7 bits (143), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 69/302 (22%), Positives = 123/302 (40%), Gaps = 13/302 (4%)
Query: 447 LQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQ 506
L+P Y + AF + G +E F + + + ++ ++ +I G L +
Sbjct: 356 LKPNVVTYSTFIDAFCKEGMLQEAIKFFVDMRR--VALTPNEFTYTSLIDANCKAGNLAE 413
Query: 507 AHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQ 566
A L++E+ AG++ + Y +LL E R +E + R +AG+ + Y AL+
Sbjct: 414 ALKLVEEILQAGIKLNVVTYTALLDGLCEEGRMKEAEEVFRAMLNAGVAPNQETYTALVH 473
Query: 567 SKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNH--EAGLMAKLLQEVKEGQ 624
I K+ A + KEMKE I +L C ++ EA L L+ E+KE
Sbjct: 474 GFIKAKEMEYAKDILKEMKEKCIKPDLLLYGTILWGLCNESRLEEAKL---LIGEIKESG 530
Query: 625 RIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTE 684
I+ + ++ + K +A L+ M LG + T+ +++ G G E
Sbjct: 531 -INTNAVIYTTLMDAYFKSGQATEALTLLEEMLDLGLIATEVTYCALIDGLCK-SGLVQE 588
Query: 685 VTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFIDKYKYR 744
+G M ++ L+D + + F A ++ M + M DK Y
Sbjct: 589 AMHHFGRMSEIGLQPNVAVYTALVDGL----CKNNCFEVAKKLFDEMLDKGMMPDKIAYT 644
Query: 745 TL 746
L
Sbjct: 645 AL 646
Score = 46.2 bits (108), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 46/200 (23%), Positives = 84/200 (42%), Gaps = 7/200 (3%)
Query: 499 ISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDA 558
I LG L++A + +M V +LL + R +D +AGI+
Sbjct: 196 IELGMLEEASECFLKMRKFRVFPKPRSCNALLHRLSKVGRGDLSRKFFKDMGAAGIKRSV 255
Query: 559 SCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQ 618
Y ++ + D A LF +MKE+ + L+ G + + GL+ + +
Sbjct: 256 FTYNIMIDYLCKEGDLEMARSLFTQMKEAGFT-PDIVTYNSLIDG---HGKLGLLDECIC 311
Query: 619 EVKEGQRIDCG--VHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYA 676
++ + DC V +N +I+ FCK M A + L M++ G PN T+ + + +
Sbjct: 312 IFEQMKDADCDPDVITYNALINCFCKFERMPKAFEFLHEMKANGLKPNVVTYSTFIDAFC 371
Query: 677 AIGGKYTEVTELWGEMKSFA 696
G E + + +M+ A
Sbjct: 372 K-EGMLQEAIKFFVDMRRVA 390
>gi|224068054|ref|XP_002302657.1| predicted protein [Populus trichocarpa]
gi|222844383|gb|EEE81930.1| predicted protein [Populus trichocarpa]
Length = 602
Score = 59.7 bits (143), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 100/244 (40%), Gaps = 53/244 (21%)
Query: 432 MLQKQVELI--TTEHGILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDA 489
M+ K +E++ ++G +P E ++ L+ A + G KE E+++V
Sbjct: 166 MVNKAIEVLDEMPKYGC-EPDEYVFGCLLDALCKNGSVKEAASLF-----EDMRVRFS-P 218
Query: 490 ALGHVITLCISLGW-----LDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTA 544
+L H C+ GW L +A +L +M AG VY +LL Y A + +
Sbjct: 219 SLKHFT--CLLYGWCKEGKLLEAKHVLVQMREAGFEPDIVVYNNLLSGYATAGKMGDAFD 276
Query: 545 LLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGC 604
LL++ R G +A+ Y L+Q+ Q+ A+ +F EM+ S GC
Sbjct: 277 LLKEIRRKGCDPNATSYTILIQALCGQEKMDEAMRVFVEMERS---------------GC 321
Query: 605 AQNHEAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPN 664
D V + ++ FCK R++ + L+ M GH+PN
Sbjct: 322 ----------------------DADVVTYTALVSGFCKWRMIDKGYQILQSMIQKGHMPN 359
Query: 665 AQTF 668
T+
Sbjct: 360 QLTY 363
>gi|357460281|ref|XP_003600422.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355489470|gb|AES70673.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 512
Score = 59.7 bits (143), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 55/257 (21%), Positives = 112/257 (43%), Gaps = 16/257 (6%)
Query: 426 LQTLLGMLQKQVELITTEHGILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQ-- 483
L+ +G+L K + E+ + PT + LV AF + GK KE + + K++++
Sbjct: 260 LKDAIGLLHKMI----LEN--INPTVYTFSILVDAFCKEGKVKEAKNVFVVMMKKDVKPN 313
Query: 484 -VSHDDAALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREV 542
V+++ G+ + + +++A + + M GV Y+ ++ + + E
Sbjct: 314 IVTYNSLMNGYCL-----VNEVNKAESIFNTMAQIGVAPDVHSYSIMISGFCKIKMVDEA 368
Query: 543 TALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVK 602
L + I D Y +L+ AL L EM + P + + L+
Sbjct: 369 MKLFEEMHCKQIFPDVVTYNSLIDGLCKSGRISYALKLIGEMHDRGQPPNI-ITYNSLLD 427
Query: 603 GCAQNHEAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHL 662
+NH +LL ++K+ I V +N +I+ CK ++DA+K + + G+
Sbjct: 428 ALCKNHHVDKAIELLTKLKD-HNIQPSVCTYNILINGLCKSGRLKDAQKVFEDVLVNGYN 486
Query: 663 PNAQTFHSMVTGYAAIG 679
+ T+++M+ G+ G
Sbjct: 487 IDVYTYNTMIKGFCKKG 503
Score = 42.0 bits (97), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 36/185 (19%), Positives = 77/185 (41%), Gaps = 9/185 (4%)
Query: 497 LCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQL 556
LC+ G + +A D++ G + + Y +L+ + + + +LR ++L
Sbjct: 149 LCLK-GDIHKALHFHDKVLALGFQLNQVSYRTLINGLCKVGQTKAALEMLRRIDGKLVRL 207
Query: 557 DASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNH---EAGLM 613
D Y ++ K A + EM +I + ++ C GL+
Sbjct: 208 DVVMYNTIIDGVCKDKLVNDAFDFYSEMVAKRICPTVVTYNTLICGLCIMGQLKDAIGLL 267
Query: 614 AKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVT 673
K++ E I+ V+ ++ ++ FCK+ +++A+ M PN T++S++
Sbjct: 268 HKMILE-----NINPTVYTFSILVDAFCKEGKVKEAKNVFVVMMKKDVKPNIVTYNSLMN 322
Query: 674 GYAAI 678
GY +
Sbjct: 323 GYCLV 327
>gi|357498921|ref|XP_003619749.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355494764|gb|AES75967.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 680
Score = 59.7 bits (143), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 77/181 (42%), Gaps = 10/181 (5%)
Query: 502 GWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCY 561
G + QA + D++ G Y +L+ + R LLR +QLD Y
Sbjct: 154 GQIHQALNFHDKLVALGFHLDQVSYGTLINGLCKVGETRAALELLRRVDGKLVQLDVVMY 213
Query: 562 EALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKG-CAQN---HEAGLMAKLL 617
++ S K+ A L+ EM +I S + L+ G C GL K+
Sbjct: 214 STIIDSMCKDKNVNDAFDLYSEMVSRRI-SSNIVTYSALISGFCIVGKLKDAIGLFNKMT 272
Query: 618 QEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAA 677
E I+ V+ +N ++ FCK+ +++A+ L M G P+ T++S++ GY
Sbjct: 273 SE-----NINPDVYTFNILVDAFCKEGRVKEAKNGLAMMMKQGIKPDIVTYNSLMDGYCL 327
Query: 678 I 678
+
Sbjct: 328 V 328
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 58/295 (19%), Positives = 116/295 (39%), Gaps = 13/295 (4%)
Query: 454 YIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQAHDLLDE 513
Y L+ F GK K+ K EN ++ D ++ G + +A + L
Sbjct: 248 YSALISGFCIVGKLKDAIGLFNKMTSEN--INPDVYTFNILVDAFCKEGRVKEAKNGLAM 305
Query: 514 MHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQKD 573
M G++ Y SL+ Y N ++L G+ Y ++ K
Sbjct: 306 MMKQGIKPDIVTYNSLMDGYCLVNEVNMAKSILNTMSHRGVTATVRSYNIVINGFCKIKM 365
Query: 574 TPGALHLFKEMKESKI-PRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKE-GQRIDCGVH 631
A+ LFKEM +I P + L+ G ++ +L+ + + GQ+ D +
Sbjct: 366 VDQAMKLFKEMHHKQIFPNV--ITYNSLIDGLCKSGRISYALELIDLMHDRGQQPD--II 421
Query: 632 DWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGE 691
+++++ CK L+ A L +++ G PN T+ ++ G GG+ + ++ +
Sbjct: 422 TYSSILDALCKNHLVDKAIALLIKLKDQGIRPNMYTYTILIDGLCK-GGRLEDARNIFED 480
Query: 692 MKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFIDKYKYRTL 746
+ + ++N ++ F G F A +++ M++ D Y +
Sbjct: 481 LLVKGYNLTVNTYTVMIQG----FCSHGLFDEALSLLSKMKDNSCIPDAITYEII 531
Score = 47.8 bits (112), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 46/226 (20%), Positives = 90/226 (39%), Gaps = 4/226 (1%)
Query: 454 YIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQAHDLLDE 513
Y L+ + G+T+ L + + + +Q+ D +I ++ A DL E
Sbjct: 178 YGTLINGLCKVGETRAALELLRRVDGKLVQL--DVVMYSTIIDSMCKDKNVNDAFDLYSE 235
Query: 514 MHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQKD 573
M + ++ Y++L+ + + ++ L S I D + L+ + +
Sbjct: 236 MVSRRISSNIVTYSALISGFCIVGKLKDAIGLFNKMTSENINPDVYTFNILVDAFCKEGR 295
Query: 574 TPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRIDCGVHDW 633
A + M + I + + L+ G +E MAK + + + V +
Sbjct: 296 VKEAKNGLAMMMKQGI-KPDIVTYNSLMDGYCLVNEVN-MAKSILNTMSHRGVTATVRSY 353
Query: 634 NNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIG 679
N VI+ FCK +++ A K K M PN T++S++ G G
Sbjct: 354 NIVINGFCKIKMVDQAMKLFKEMHHKQIFPNVITYNSLIDGLCKSG 399
>gi|41152687|dbj|BAD08212.1| hypothetical protein [Oryza sativa Indica Group]
gi|46091163|dbj|BAD13710.1| PPR protein [Oryza sativa Indica Group]
gi|67906116|dbj|BAE00068.1| PPR protein [Oryza sativa Indica Group]
gi|114437073|gb|ABI74690.1| fertility restorer [Oryza sativa Indica Group]
Length = 683
Score = 59.7 bits (143), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 99/479 (20%), Positives = 192/479 (40%), Gaps = 42/479 (8%)
Query: 227 IGYLFQDGRVDPRKKCNAPLIAMK--PNTNTFNIALAGCLLFETTRKAEQLLDIMPRIGV 284
I F++G +D ++ + PN T+N +A +T KA ++L M + GV
Sbjct: 95 INGFFKEGDLDKTYSTYNEMLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKSGV 154
Query: 285 KADSNLLIIMAHIYERNGR-REELRKLQRHIDEAVNLSDIQFRQFYNCLLSCHLKFGDLN 343
D + H + +G+ +E + L++ + V + YN L+ K G
Sbjct: 155 MPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVT----YNSLMDYLCKNGRCT 210
Query: 344 SASKMVLEMLQRAKEARNSLAAAMLPFNAVGVNNRTPSEQNVNCTNSVDLE-NSGIIENH 402
A K+ M +R + + +L A V +DL +GI NH
Sbjct: 211 EARKIFDSMTKRGLKPEITTYGTLLQGYAT-------KGALVEMHGLLDLMVRNGIHPNH 263
Query: 403 ------ILSYEDFTKDRKFVALEAEVKR--------VLQTLLGMLQK--QVE--LITTEH 444
+ +Y K + + + +++++ ++G+L K +VE ++ E
Sbjct: 264 YVFSILVCAYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQ 323
Query: 445 GI---LQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISL 501
I L P +Y L+ K + ++ E + + + +I
Sbjct: 324 MIDEGLSPGNIVYNSLIHGLCTCNKWERAEELIL--EMLDRGICLNTIFFNSIIDSHCKE 381
Query: 502 GWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCY 561
G + ++ L D M GV+ Y++L+ Y A + E T LL S G++ D Y
Sbjct: 382 GRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTY 441
Query: 562 EALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEV- 620
L+ AL LF+EM+ S + + ++++G Q +L +
Sbjct: 442 STLINGYCKISRMKDALVLFREMESSGVSPD-IITYNIILQGLFQTRRTAAAKELYVGIT 500
Query: 621 KEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIG 679
K G++++ + +N ++H CK +L DA + + + + A+TF+ M+ +G
Sbjct: 501 KSGRQLE--LSTYNIILHGLCKNKLTDDALRMFQNLCLMDLKLEARTFNIMIDALLKVG 557
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 87/196 (44%), Gaps = 5/196 (2%)
Query: 502 GWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCY 561
G L + H LLD M G+ + V++ L+ AY + + E + R G+ +A Y
Sbjct: 242 GALVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQEKVEEAMLVFSKMRQQGLNPNAVTY 301
Query: 562 EALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKG-CAQNHEAGLMAKLLQEV 620
A++ A+ F++M + + G+ + L+ G C N +L+ +
Sbjct: 302 GAVIGILCKSGRVEDAMLYFEQMIDEGLS-PGNIVYNSLIHGLCTCNKWERAEELILEML 360
Query: 621 KEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGG 680
G I +N++I CK+ + ++EK M +G P+ T+ +++ GY + G
Sbjct: 361 DRG--ICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGY-CLAG 417
Query: 681 KYTEVTELWGEMKSFA 696
K E T+L M S
Sbjct: 418 KMDEATKLLASMVSVG 433
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 52/237 (21%), Positives = 100/237 (42%), Gaps = 17/237 (7%)
Query: 502 GWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCY 561
G +D+A LL M G++ Y++L+ Y + +R ++ L R+ S+G+ D Y
Sbjct: 417 GKMDEATKLLASMVSVGMKPDCVTYSTLINGYCKISRMKDALVLFREMESSGVSPDIITY 476
Query: 562 EALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQ----EFEMLVKGCAQNHEAGLMAKLL 617
+LQ + T A L+ I +SG Q + +++ G +N ++
Sbjct: 477 NIILQGLFQTRRTAAAKELY-----VGITKSGRQLELSTYNIILHGLCKNKLTDDALRMF 531
Query: 618 QEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAA 677
Q + + +N +I K +A+ S G +PN T+ M
Sbjct: 532 QNLCL-MDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAEN--I 588
Query: 678 IG-GKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEE 733
IG G E+ +L+ M+ + D +L+ ++ ++ G RA ++M++E
Sbjct: 589 IGQGLLEELDQLFLSMEDNGCTV----DSGMLNFIVRELLQRGEITRAGTYLSMIDE 641
Score = 46.6 bits (109), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 46/240 (19%), Positives = 97/240 (40%), Gaps = 12/240 (5%)
Query: 437 VELITTEHGILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVIT 496
+ ++ + G P Y ++ F + G + + E + ++S + +I
Sbjct: 74 LHIMADDGGDCPPDVVSYSTVINGFFKEGDLDK--TYSTYNEMLDQRISPNVVTYNSIIA 131
Query: 497 LCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQL 556
+D+A ++L M +GV Y S++ + + +P+E L+ RS G++
Sbjct: 132 ALCKAQTVDKAMEVLTTMVKSGVMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEP 191
Query: 557 DASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKL 616
D Y +L+ A +F M + + + + L++G A M L
Sbjct: 192 DVVTYNSLMDYLCKNGRCTEARKIFDSMTKRGL-KPEITTYGTLLQGYATKGALVEMHGL 250
Query: 617 LQEVKEGQRIDCGVHDWNNVIHF----FCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMV 672
L + + G+H + V + K+ +++A +MR G PNA T+ +++
Sbjct: 251 LDLM-----VRNGIHPNHYVFSILVCAYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGAVI 305
>gi|357121540|ref|XP_003562477.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g32630-like [Brachypodium distachyon]
Length = 556
Score = 59.7 bits (143), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 55/246 (22%), Positives = 101/246 (41%), Gaps = 44/246 (17%)
Query: 502 GWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCY 561
G +D AH LLDE+ GV ++ Y SLL +Y V LL++ + G++ Y
Sbjct: 162 GSVDDAHGLLDELPRHGVGLNACCYNSLLDSYTRQRNDDAVAGLLKEMENRGVEPTVGTY 221
Query: 562 EALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVK 621
L+ D ++ EMK + AG
Sbjct: 222 TILVDGLSRAGDISKVEAVYDEMKRKNV--------------------AG---------- 251
Query: 622 EGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGK 681
V+ ++ VI+ +C+ ++ A + G PN +T+ +++ G+ IG
Sbjct: 252 -------DVYFYSAVINAYCRGGNVRRASEVFDECVGHGVEPNERTYGALINGFCKIG-- 302
Query: 682 YTEVTE-LWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFIDK 740
E E L +M+ + ++ + ++++ + R G +A E+ A+ME+ + +D
Sbjct: 303 QIEAAEMLLADMQ----LRGVGHNQIVFNTMIDGYCRHGMVEKALEIKAVMEKMGIELDI 358
Query: 741 YKYRTL 746
Y Y TL
Sbjct: 359 YTYNTL 364
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/249 (21%), Positives = 104/249 (41%), Gaps = 15/249 (6%)
Query: 502 GWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCY 561
G + + + DEM V Y++++ AY R + + + G++ + Y
Sbjct: 232 GDISKVEAVYDEMKRKNVAGDVYFYSAVINAYCRGGNVRRASEVFDECVGHGVEPNERTY 291
Query: 562 EALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQE--FEMLVKGCAQNHEAGLMAKLLQ- 618
AL+ A L +M+ + GH + F ++ G ++ G++ K L+
Sbjct: 292 GALINGFCKIGQIEAAEMLLADMQLRGV---GHNQIVFNTMIDGYCRH---GMVEKALEI 345
Query: 619 -EVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAA 677
V E I+ ++ +N + C+ M+DA+K L M G PN ++ ++++ +A
Sbjct: 346 KAVMEKMGIELDIYTYNTLACGLCRVNRMEDAKKLLHIMAEKGVAPNYVSYTTLISIHAK 405
Query: 678 IGGKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMF 737
G E L+ +M+ S S+ ++D +++ G A ME+ +
Sbjct: 406 -EGDMVEARRLFRDMEGKGSRPSVVTYNVMIDG----YIKNGSIREAERFKKEMEKKGLV 460
Query: 738 IDKYKYRTL 746
D Y Y L
Sbjct: 461 PDIYTYAGL 469
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 54/250 (21%), Positives = 105/250 (42%), Gaps = 8/250 (3%)
Query: 444 HGILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGW 503
HG+ +P E+ Y L+ F + G+ + L A+ + V H+ +I G
Sbjct: 282 HGV-EPNERTYGALINGFCKIGQIEAAEMLL--ADMQLRGVGHNQIVFNTMIDGYCRHGM 338
Query: 504 LDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEA 563
+++A ++ M G+ Y +L NR + LL G+ + Y
Sbjct: 339 VEKALEIKAVMEKMGIELDIYTYNTLACGLCRVNRMEDAKKLLHIMAEKGVAPNYVSYTT 398
Query: 564 LLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEV-KE 622
L+ + D A LF++M E K R + +++ G +N + +E+ K+
Sbjct: 399 LISIHAKEGDMVEARRLFRDM-EGKGSRPSVVTYNVMIDGYIKNGSIREAERFKKEMEKK 457
Query: 623 GQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKY 682
G D ++ + ++H C + A + + M+ G PN + ++V+G A G+
Sbjct: 458 GLVPD--IYTYAGLVHGHCVNGKVDVALRLFEEMKHRGTKPNVVAYTALVSGLAK-EGRS 514
Query: 683 TEVTELWGEM 692
E +L+ +M
Sbjct: 515 EEAFQLYDDM 524
Score = 43.5 bits (101), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 53/243 (21%), Positives = 101/243 (41%), Gaps = 11/243 (4%)
Query: 454 YIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQAHDLLDE 513
Y ++ A+ G + + E V ++ G +I +G ++ A LL +
Sbjct: 256 YSAVINAYCRGGNVRRASEVF--DECVGHGVEPNERTYGALINGFCKIGQIEAAEMLLAD 313
Query: 514 MHLAGVRASSSVYASLLKAYIE---ANRPREVTALLRDARSAGIQLDASCYEALLQSKIV 570
M L GV + V+ +++ Y + E+ A++ GI+LD Y L
Sbjct: 314 MQLRGVGHNQIVFNTMIDGYCRHGMVEKALEIKAVME---KMGIELDIYTYNTLACGLCR 370
Query: 571 QKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRIDCGV 630
A L M E + + + + L+ A+ + +L +++ EG+ V
Sbjct: 371 VNRMEDAKKLLHIMAEKGVAPN-YVSYTTLISIHAKEGDMVEARRLFRDM-EGKGSRPSV 428
Query: 631 HDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWG 690
+N +I + K +++AE+ K M G +P+ T+ +V G+ + GK L+
Sbjct: 429 VTYNVMIDGYIKNGSIREAERFKKEMEKKGLVPDIYTYAGLVHGH-CVNGKVDVALRLFE 487
Query: 691 EMK 693
EMK
Sbjct: 488 EMK 490
Score = 43.1 bits (100), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 74/374 (19%), Positives = 135/374 (36%), Gaps = 60/374 (16%)
Query: 248 AMKPNTNTFNIALAGCLLFETTRKAEQLLDIMPRIGVKADSNLLIIMAHIYERNGRREEL 307
++P T+ I + G K E + D M R V D + + Y R G +
Sbjct: 213 GVEPTVGTYTILVDGLSRAGDISKVEAVYDEMKRKNVAGDVYFYSAVINAYCRGG---NV 269
Query: 308 RKLQRHIDEAVNLSDIQFRQFYNCLLSCHLKFGDLNSASKMVLEMLQRA----------- 356
R+ DE V + Y L++ K G + +A ++ +M R
Sbjct: 270 RRASEVFDECVGHGVEPNERTYGALINGFCKIGQIEAAEMLLADMQLRGVGHNQIVFNTM 329
Query: 357 --KEARNSLAAAMLPFNAV----GVNNRTPSEQNVNC----TNSVD--------LENSGI 398
R+ + L AV G+ + + C N ++ + G+
Sbjct: 330 IDGYCRHGMVEKALEIKAVMEKMGIELDIYTYNTLACGLCRVNRMEDAKKLLHIMAEKGV 389
Query: 399 IENHILSYEDFTKDRKFVALEAEVKRVLQTLLGMLQKQVELITTEHGILQPTEKIYIKLV 458
N++ SY E +R+ + + G + P+ Y ++
Sbjct: 390 APNYV-SYTTLISIHAKEGDMVEARRLFRDMEGKGSR-------------PSVVTYNVMI 435
Query: 459 KAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQAHDLLDEMHLAG 518
+++ G +E F + EK+ L V G V C++ G +D A L +EM G
Sbjct: 436 DGYIKNGSIREAERFKKEMEKKGL-VPDIYTYAGLVHGHCVN-GKVDVALRLFEEMKHRG 493
Query: 519 VRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQKDTPGAL 578
+ + Y +L+ + R E L D +AG+ D + Y L+ G+L
Sbjct: 494 TKPNVVAYTALVSGLAKEGRSEEAFQLYDDMLAAGLTPDDTLYSVLV----------GSL 543
Query: 579 HLFKEMKESKIPRS 592
H + ++ +PR+
Sbjct: 544 H--TDSRKDPLPRT 555
>gi|356541064|ref|XP_003539003.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50280,
chloroplastic-like [Glycine max]
Length = 703
Score = 59.7 bits (143), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 58/257 (22%), Positives = 119/257 (46%), Gaps = 28/257 (10%)
Query: 484 VSHDDAALGHVI-TLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREV 542
V + LG +I + C+ G + +A +L E+ GV +++ VY +L+ AY ++NR E
Sbjct: 327 VKWGEEVLGALIKSFCVE-GLMSEALIILSELEKKGVSSNTIVYNTLMDAYCKSNRVEEA 385
Query: 543 TALLRDARSAGIQLDASCYEAL-------LQSKIVQKDTPGALHLFKEMKESKIPRSGHQ 595
L + ++ GI+ + + L +Q +IV+K L EM+E+ + + +
Sbjct: 386 EGLFVEMKTKGIKPTEATFNILMYAYSRKMQPEIVEK-------LMAEMQETGL-KPNAK 437
Query: 596 EFEMLVKGCAQNHEAGLMA--KLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKAL 653
+ ++ + MA L+ K+G I H + +IH + + A A
Sbjct: 438 SYTCIISAYGKQKNMSDMAADAFLKMKKDG--IKPTSHSYTALIHAYSVSGWHEKAYAAF 495
Query: 654 KRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEM-KSFASSTSMNFDEELLDSVL 712
+ M+ G P+ +T+ +++ + G T + ++W M + T + F+ L+D
Sbjct: 496 ENMQREGIKPSIETYTALLDAFRRAGDTQT-LMKIWKLMRREKVEGTRVTFN-TLVDG-- 551
Query: 713 YTFVRGGFFARANEVVA 729
F + G++ A +V++
Sbjct: 552 --FAKHGYYKEARDVIS 566
Score = 44.7 bits (104), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 52/255 (20%), Positives = 106/255 (41%), Gaps = 18/255 (7%)
Query: 507 AHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQ 566
A ++M+ GV+ V +L+K++ E +L + G+ + Y L+
Sbjct: 315 AWQFFEKMNGKGVKWGEEVLGALIKSFCVEGLMSEALIILSELEKKGVSSNTIVYNTLMD 374
Query: 567 SKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRI 626
+ A LF EMK I + F +L+ ++ + ++ KL+ E++E +
Sbjct: 375 AYCKSNRVEEAEGLFVEMKTKGI-KPTEATFNILMYAYSRKMQPEIVEKLMAEMQETG-L 432
Query: 627 DCGVHDWNNVIHFFCKKRLMQD-AEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEV 685
+ +I + K++ M D A A +M+ G P + ++ +++ Y+ G
Sbjct: 433 KPNAKSYTCIISAYGKQKNMSDMAADAFLKMKKDGIKPTSHSYTALIHAYSVSG------ 486
Query: 686 TELWGEMKSFASSTSMNFDE-----ELLDSVLYTFVRGGFFARANEVVAMMEEGKMFIDK 740
W E K++A+ +M + E ++L F R G ++ +M K+ +
Sbjct: 487 ---WHE-KAYAAFENMQREGIKPSIETYTALLDAFRRAGDTQTLMKIWKLMRREKVEGTR 542
Query: 741 YKYRTLFLKYHKTLY 755
+ TL + K Y
Sbjct: 543 VTFNTLVDGFAKHGY 557
>gi|225451367|ref|XP_002263590.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g09680 [Vitis vinifera]
gi|296087085|emb|CBI33459.3| unnamed protein product [Vitis vinifera]
Length = 592
Score = 59.7 bits (143), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 82/189 (43%), Gaps = 9/189 (4%)
Query: 492 GHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARS 551
GH +T G D ++ +M GV+ Y +L+ + RE L+ +
Sbjct: 339 GHCVT-----GRADLGMEIYQQMLRKGVKPDVITYNTLINGLCKVGDLREAKKLVIEMTQ 393
Query: 552 AGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAG 611
G++ D Y L+ + D AL + KEM + I + F L+ G + +
Sbjct: 394 RGLKPDKFTYTMLIDGCCKEGDLESALEIRKEMVKEGIELD-NVAFTALISGFCREGQVI 452
Query: 612 LMAKLLQEVKE-GQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHS 670
+ L+E+ E G + D + VIH FCKK ++ K LK M+ GH+P T++
Sbjct: 453 EAERTLREMLEAGIKPDDAT--YTMVIHGFCKKGDVKTGFKLLKEMQCDGHVPGVVTYNV 510
Query: 671 MVTGYAAIG 679
++ G G
Sbjct: 511 LLNGLCKQG 519
Score = 55.8 bits (133), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 47/207 (22%), Positives = 96/207 (46%), Gaps = 5/207 (2%)
Query: 497 LCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQL 556
LC +G L +A L+ EM G++ Y L+ + + ++ GI+L
Sbjct: 375 LC-KVGDLREAKKLVIEMTQRGLKPDKFTYTMLIDGCCKEGDLESALEIRKEMVKEGIEL 433
Query: 557 DASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKL 616
D + AL+ + A +EM E+ I + + M++ G + + KL
Sbjct: 434 DNVAFTALISGFCREGQVIEAERTLREMLEAGI-KPDDATYTMVIHGFCKKGDVKTGFKL 492
Query: 617 LQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYA 676
L+E++ + GV +N +++ CK+ M++A L M +LG +P+ T++ ++ G+
Sbjct: 493 LKEMQCDGHVP-GVVTYNVLLNGLCKQGQMKNANMLLDAMLNLGVVPDDITYNILLEGHC 551
Query: 677 AIGGK--YTEVTELWGEMKSFASSTSM 701
G + + ++ G ++ + S TS+
Sbjct: 552 KHGNREDFDKLQSEKGLVQDYGSYTSL 578
>gi|168059281|ref|XP_001781632.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162666946|gb|EDQ53588.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 871
Score = 59.7 bits (143), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 65/278 (23%), Positives = 117/278 (42%), Gaps = 18/278 (6%)
Query: 494 VITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAG 553
+I+ LG ++ A D+ + AG + Y++++ AY + R RE + + + AG
Sbjct: 206 MISTLGRLGKVEIALDVFNRAQKAGFGNNVYAYSAMVSAYGRSGRCREALKVFQAMKKAG 265
Query: 554 IQLDASCYEALLQS-KIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGL 612
+ + Y ++ + D AL +F EM++ + F L+ C++ GL
Sbjct: 266 CKPNLITYNTIIDACGKGGVDLKQALDIFDEMQKEGV-EPDRITFNSLIAVCSR---GGL 321
Query: 613 MAKLLQEVKEGQR--IDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHS 670
+ E QR I+ + +N +I CK M+ A + MR PN T+ +
Sbjct: 322 WEDSQRVFAEMQRRGIEQDIFTFNTLIDAVCKGGQMELAASIMTTMRGKNISPNVVTYST 381
Query: 671 MVTGYAAIGGKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAM 730
M+ GY + G + E L+ +MK + + D ++++ + + G F A
Sbjct: 382 MIDGYGKL-GCFEEAISLYHDMK----ESGVRPDRVSYNTLIDIYAKLGRFDDALIACKD 436
Query: 731 MEEGKMFIDKYKYRTLFLKYHKTLYKGKTPKFQTEAQL 768
ME + D Y L Y GK K++ A L
Sbjct: 437 MERVGLKADVVTYNALIDAY------GKQGKYKDAACL 468
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 86/190 (45%), Gaps = 10/190 (5%)
Query: 501 LGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASC 560
LG ++A L +M +GVR Y +L+ Y + R + +D G++ D
Sbjct: 389 LGCFEEAISLYHDMKESGVRPDRVSYNTLIDIYAKLGRFDDALIACKDMERVGLKADVVT 448
Query: 561 YEALLQSKIVQKDTPGALHLFKEMK-ESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQE 619
Y AL+ + Q A LF +MK E +P + L+ ++ ++ + E
Sbjct: 449 YNALIDAYGKQGKYKDAACLFDKMKGEGLVPNV--LTYSALIDSYSKAGMHQDVSNVFTE 506
Query: 620 VKE-GQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAI 678
K G + D V ++++I CK L++DA L+ M G PN T++S++ Y
Sbjct: 507 FKRAGLKPD--VVLYSSLIDSCCKCGLVEDAVVLLQEMTQAGIQPNIVTYNSLIDAY--- 561
Query: 679 GGKYTEVTEL 688
G+Y + +L
Sbjct: 562 -GRYGQADKL 570
>gi|413924892|gb|AFW64824.1| hypothetical protein ZEAMMB73_716034 [Zea mays]
Length = 721
Score = 59.3 bits (142), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 53/233 (22%), Positives = 97/233 (41%), Gaps = 38/233 (16%)
Query: 447 LQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQ 506
++PT Y L+ +FL+ G+ E + L + E + S +D VI+ G L+
Sbjct: 233 VEPTIVTYNTLLDSFLKEGRKDEASMLLKEMETQGGGFSLNDVTFNVVISFLAREGHLEN 292
Query: 507 AHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQ 566
A L+D M L+ +ASS Y L+ A +E R+ AL + + GI Y A++
Sbjct: 293 AVKLVDSMRLSK-KASSFTYNPLITALLERGFVRKAEALQMEMENEGIMPTVVTYNAIIH 351
Query: 567 SKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRI 626
+ + A F EM+ GL+ ++
Sbjct: 352 GLLKCEQAEAAQVKFAEMR-----------------------AMGLLPDVIT-------- 380
Query: 627 DCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIG 679
+N++++ +CK +++A L +R G P T+++++ GY +G
Sbjct: 381 ------YNSLLNRYCKAGNLKEALWLLGDLRRAGLAPTVLTYNTLIDGYCRLG 427
Score = 48.9 bits (115), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 56/247 (22%), Positives = 101/247 (40%), Gaps = 14/247 (5%)
Query: 505 DQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRD--ARSAGIQLDASCYE 562
D + EM V + Y +LL ++++ R E + LL++ + G L+ +
Sbjct: 219 DDVRAVYGEMLQLRVEPTIVTYNTLLDSFLKEGRKDEASMLLKEMETQGGGFSLNDVTFN 278
Query: 563 ALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLM--AKLLQEV 620
++ + A+ L M+ SK ++ + L+ E G + A+ LQ
Sbjct: 279 VVISFLAREGHLENAVKLVDSMRLSK--KASSFTYNPLITALL---ERGFVRKAEALQME 333
Query: 621 KEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGG 680
E + I V +N +IH K + A+ MR++G LP+ T++S++ Y G
Sbjct: 334 MENEGIMPTVVTYNAIIHGLLKCEQAEAAQVKFAEMRAMGLLPDVITYNSLLNRYCK-AG 392
Query: 681 KYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFIDK 740
E L G+++ + ++ L+D + R G A A + M E F D
Sbjct: 393 NLKEALWLLGDLRRAGLAPTVLTYNTLIDG----YCRLGDLAEARRLKEEMVEQGCFPDV 448
Query: 741 YKYRTLF 747
Y L
Sbjct: 449 CTYTILM 455
Score = 43.5 bits (101), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 85/398 (21%), Positives = 156/398 (39%), Gaps = 50/398 (12%)
Query: 298 YERNGRREELRKLQRHIDE---AVNLSDIQFRQFYNCLLSCHLKFGDLNSASKMVLEMLQ 354
+ + GR++E L + ++ +L+D+ F N ++S + G L +A K+V M
Sbjct: 247 FLKEGRKDEASMLLKEMETQGGGFSLNDVTF----NVVISFLAREGHLENAVKLVDSMRL 302
Query: 355 RAKEAR---NSLAAAMLPFNAVGVNNRTPSEQNVNCTNSVDLENSGIIENHILSYEDFTK 411
K + N L A+L G + + Q +++EN GI+ +++Y
Sbjct: 303 SKKASSFTYNPLITALL---ERGFVRKAEALQ-------MEMENEGIMPT-VVTYNAIIH 351
Query: 412 D--RKFVALEAEVKRVLQTLLGMLQKQVELITTEHGILQPTEKIYIKLVKAFLEAGKTKE 469
+ A A+VK +G+L P Y L+ + +AG KE
Sbjct: 352 GLLKCEQAEAAQVKFAEMRAMGLL---------------PDVITYNSLLNRYCKAGNLKE 396
Query: 470 LTHFLIKAEKENLQ---VSHDDAALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVY 526
L + L ++++ G+ LG L +A L +EM G Y
Sbjct: 397 ALWLLGDLRRAGLAPTVLTYNTLIDGYC-----RLGDLAEARRLKEEMVEQGCFPDVCTY 451
Query: 527 ASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKE 586
L+ + + S G+Q D Y + +++ TP A L +E+
Sbjct: 452 TILMNGSRKVRNLAMAREFFDEMLSKGLQPDCFAYNTRICAELTLSSTPMAFQL-REVMM 510
Query: 587 SKIPRSGHQEFEMLVKGCAQNHEAGLMAKL-LQEVKEGQRIDCGVHDWNNVIHFFCKKRL 645
K + +++ G + +L + V +G + DC + +IH C++ L
Sbjct: 511 LKGIYPDTVTYNVIIDGLCKTGNLKDAKRLKTKMVSDGLQPDCIT--YTCLIHAHCERGL 568
Query: 646 MQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYT 683
+++A K L M S G P+ T+ +V G Y+
Sbjct: 569 LREARKLLNGMVSDGLQPSVVTYTILVHTCCRRGNLYS 606
>gi|222626074|gb|EEE60206.1| hypothetical protein OsJ_13175 [Oryza sativa Japonica Group]
Length = 789
Score = 59.3 bits (142), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 60/267 (22%), Positives = 110/267 (41%), Gaps = 13/267 (4%)
Query: 487 DDAALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALL 546
D A+ H++ G L + +L EM G S Y L++A+ E A+L
Sbjct: 86 DTASYRHIVDAFAGAGNLSRVAELFAEMSATGHTPDPSAYLGLMEAHTLVGATAEAVAVL 145
Query: 547 RDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQ 606
R ++ G A+ Y LL Q G LF+EM+ + P + + +L +
Sbjct: 146 RQMQADGCPPTAATYRVLLDLYGRQGRFDGVRELFREMRTTVPPDTA--TYNVLFRVFGD 203
Query: 607 NHEAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQ 666
+ +L Q++ + ++ + NV+ + L +DA + L + + G +P A+
Sbjct: 204 GGFFKEVVELFQDMLHSE-VEPDIDTCENVMVACGRGGLHEDAREVLDYITTEGMVPTAK 262
Query: 667 TFHSMVT--GYAAIGGKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARA 724
+ +V G+AA+ Y E + M S ++ E +++ F +GG F A
Sbjct: 263 AYTGLVEALGHAAM---YEEAYVAFNMMTEIGSLPTI----ETYNALANAFAKGGLFQEA 315
Query: 725 NEVVA-MMEEGKMFIDKYKYRTLFLKY 750
+ + M + DK + L Y
Sbjct: 316 EAIFSRMTNNAAIQKDKDSFDALIEAY 342
>gi|168034142|ref|XP_001769572.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162679114|gb|EDQ65565.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 871
Score = 59.3 bits (142), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 63/285 (22%), Positives = 121/285 (42%), Gaps = 14/285 (4%)
Query: 494 VITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAG 553
+I+ LG ++ A D+ + AG + Y++++ AY + R RE + + + AG
Sbjct: 205 MISTLGRLGKVEIALDVFNRAQKAGFGNNVYAYSAMVSAYGRSGRCREALKVFQAMKKAG 264
Query: 554 IQLDASCYEALLQS-KIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGL 612
+ + Y ++ + D AL +F+EM++ + F L+ C++
Sbjct: 265 CKPNLITYNTIIDACGKGGVDLKKALDIFEEMQKEGV-EPDRITFNSLIAVCSRGSLWED 323
Query: 613 MAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMV 672
++ E++ + I+ + +N +I CK M+ A + MR PN T+ +M+
Sbjct: 324 SQRVFAEMQR-RGIEQDIFTYNTLIDAVCKGGQMELAASIMSSMRLKNISPNVVTYSTMI 382
Query: 673 TGYAAIGGKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMME 732
GY + G + E L+ +MK + + D ++++ + + G F A ME
Sbjct: 383 DGYGKL-GCFEEAIGLYHDMK----ESGVRPDRVSYNTLIDIYAKLGRFDDALTACKDME 437
Query: 733 EGKMFIDKYKYRTLFLKYHKTLYKGKTPKFQTEAQLKKREAALGF 777
+ D Y L Y GK K++ A L + A G
Sbjct: 438 RVGLKADVVTYNALIDAY------GKQGKYKDAAGLFDKMKAEGL 476
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 79/181 (43%), Gaps = 6/181 (3%)
Query: 501 LGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASC 560
LG ++A L +M +GVR Y +L+ Y + R + +D G++ D
Sbjct: 388 LGCFEEAIGLYHDMKESGVRPDRVSYNTLIDIYAKLGRFDDALTACKDMERVGLKADVVT 447
Query: 561 YEALLQSKIVQKDTPGALHLFKEMK-ESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQE 619
Y AL+ + Q A LF +MK E +P + L+ ++ + E
Sbjct: 448 YNALIDAYGKQGKYKDAAGLFDKMKAEGLVPNV--LTYSALIDAYSKAGMHQDATSIFVE 505
Query: 620 VKE-GQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAI 678
K G + D ++ +++I CK L++DA L+ M G PN T++S++ Y
Sbjct: 506 FKRAGLKPDVVLY--SSLIDSCCKCGLVEDAVVLLQEMTQAGIQPNIVTYNSLIDAYGRN 563
Query: 679 G 679
G
Sbjct: 564 G 564
>gi|147861320|emb|CAN83994.1| hypothetical protein VITISV_031191 [Vitis vinifera]
Length = 559
Score = 59.3 bits (142), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 82/189 (43%), Gaps = 9/189 (4%)
Query: 492 GHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARS 551
GH +T G D ++ +M GV+ Y +L+ + RE L+ +
Sbjct: 339 GHCVT-----GRADLGMEIYQQMLRKGVKPDVITYNTLINGLCKVGDLREAKKLVIEMTQ 393
Query: 552 AGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAG 611
G++ D Y L+ + D AL + KEM + I + F L+ G + +
Sbjct: 394 RGLKPDKFTYTMLIDGCCKEGDLESALEIRKEMVKEGIELD-NVAFTALISGFCREGQVI 452
Query: 612 LMAKLLQEVKE-GQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHS 670
+ L+E+ E G + D + VIH FCKK ++ K LK M+ GH+P T++
Sbjct: 453 EAERTLREMLEAGIKPDDAT--YTMVIHGFCKKGDVKTGFKLLKEMQCDGHVPGVVTYNV 510
Query: 671 MVTGYAAIG 679
++ G G
Sbjct: 511 LLNGLCKQG 519
Score = 47.4 bits (111), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 44/227 (19%), Positives = 87/227 (38%), Gaps = 41/227 (18%)
Query: 447 LQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQ 506
++P Y L+ + G +E +I+ + L+ D +I C G L+
Sbjct: 361 VKPDVITYNTLINGLCKVGDLREAKKLVIEMTQRGLK--PDKFTYTMLIDGCCKEGDLES 418
Query: 507 AHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQ 566
A ++ EM G+ + + +L+ + + E LR+ AGI+ D + Y ++
Sbjct: 419 ALEIRKEMVKEGIELDNVAFTALISGFCREGQVIEAERTLREMLEAGIKPDDATYTMVIH 478
Query: 567 SKIVQKDTPGALHLFKEMK-ESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQR 625
+ D L KEM+ + +P
Sbjct: 479 GFCKKGDVKTGFKLLKEMQCDGHVP----------------------------------- 503
Query: 626 IDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMV 672
GV +N +++ CK+ M++A L M +LG +P+ T++ ++
Sbjct: 504 ---GVVTYNVLLNGLCKQGQMKNANMLLDAMLNLGVVPDDITYNILL 547
>gi|297725255|ref|NP_001174991.1| Os06g0710800 [Oryza sativa Japonica Group]
gi|53792631|dbj|BAD53645.1| putative crp1 protein [Oryza sativa Japonica Group]
gi|215693375|dbj|BAG88757.1| unnamed protein product [Oryza sativa Japonica Group]
gi|255677390|dbj|BAH93719.1| Os06g0710800 [Oryza sativa Japonica Group]
Length = 492
Score = 59.3 bits (142), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 68/287 (23%), Positives = 127/287 (44%), Gaps = 11/287 (3%)
Query: 447 LQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQ 506
L+P+ Y +L++A AG+T E L+ E L + D A ++ +S L
Sbjct: 82 LRPSGAAYARLIRALARAGRTLEAEALLL--EMRRLGLRPDAAHYNALLEGLLSTAHLRL 139
Query: 507 AHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQ 566
A LL +M GV + Y LL AY A R + +L + + GI+LD + Y L++
Sbjct: 140 ADRLLLQMADDGVARNRRTYMLLLNAYARAGRLEDSWWVLGEMKRRGIRLDTAGYSTLVR 199
Query: 567 SKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEV-KEGQR 625
A L EM+E + + + L+ + + K+ ++ EG +
Sbjct: 200 LYRDNGMWKKATDLIMEMQELGVELD-VKIYNGLIDTFGKYGQLADARKVFDKMCAEGVK 258
Query: 626 IDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEV 685
D + WN++I + C+ + A + M+ G P+ + F ++++ GK+ E+
Sbjct: 259 PD--ITTWNSLIRWHCRVGNTKRALRFFAAMQEEGMYPDPKIFVTIISRLGE-QGKWDEI 315
Query: 686 TELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMME 732
+L+ M++ S L+D + + G F A++ VA ++
Sbjct: 316 KKLFHGMRNRGLKESGAVYAVLVD----IYGQYGHFRDAHDCVAALK 358
Score = 56.2 bits (134), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 58/241 (24%), Positives = 109/241 (45%), Gaps = 13/241 (5%)
Query: 510 LLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKI 569
LL +M AG+R S + YA L++A A R E ALL + R G++ DA+ Y ALL+ +
Sbjct: 73 LLADMQAAGLRPSGAAYARLIRALARAGRTLEAEALLLEMRRLGLRPDAAHYNALLEGLL 132
Query: 570 VQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVK-EGQRIDC 628
A L +M + + R+ + + +L+ A+ +L E+K G R+D
Sbjct: 133 STAHLRLADRLLLQMADDGVARN-RRTYMLLLNAYARAGRLEDSWWVLGEMKRRGIRLDT 191
Query: 629 GVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTEL 688
++ ++ + + + A + M+ LG + + ++ ++ + GKY ++ +
Sbjct: 192 A--GYSTLVRLYRDNGMWKKATDLIMEMQELGVELDVKIYNGLIDTF----GKYGQLAD- 244
Query: 689 WGEMKSF--ASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFIDKYKYRTL 746
K F + + D +S++ R G RA A M+E M+ D + T+
Sbjct: 245 --ARKVFDKMCAEGVKPDITTWNSLIRWHCRVGNTKRALRFFAAMQEEGMYPDPKIFVTI 302
Query: 747 F 747
Sbjct: 303 I 303
>gi|15231886|ref|NP_188076.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75274210|sp|Q9LUD6.1|PP230_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g14580, mitochondrial; Flags: Precursor
gi|9294380|dbj|BAB02390.1| unnamed protein product [Arabidopsis thaliana]
gi|119935972|gb|ABM06049.1| At3g14580 [Arabidopsis thaliana]
gi|332642020|gb|AEE75541.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 405
Score = 59.3 bits (142), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 64/263 (24%), Positives = 113/263 (42%), Gaps = 15/263 (5%)
Query: 448 QPTEKIYIKLVKAFLEAGKTKELTHFL--IKAEKENLQVSHDDAALGHVITLCISL-GWL 504
QPTE +Y ++ F +A E+ + IK EK + + +++ + +L G +
Sbjct: 92 QPTESLYALMINKFGQAKMYDEIEEVMRTIKLEK---RCRFSEEFFYNLMRIYGNLAGRI 148
Query: 505 DQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEAL 564
++A ++L M G SS + +L + A E+ + A G+++DA C L
Sbjct: 149 NRAIEILFGMPDFGCWPSSKSFNFILNLLVSAKLFDEIHKIFVSAPKLGVEIDACCLNIL 208
Query: 565 LQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQ 624
++ + AL L E + K R F L++G + KLL+ + E +
Sbjct: 209 IKGLCESGNLEAALQLLDEFPQQK-SRPNVMTFSPLIRGFCNKGKFEEAFKLLERM-EKE 266
Query: 625 RIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTE 684
RI+ +N +I KK +++ L+RM+ G PN T+ ++ G + E
Sbjct: 267 RIEPDTITFNILISGLRKKGRVEEGIDLLERMKVKGCEPNPGTYQEVLYGLLD-KKRNLE 325
Query: 685 VTEL------WGEMKSFASSTSM 701
E+ WG SF S M
Sbjct: 326 AKEMMSQMISWGMRPSFLSYKKM 348
>gi|125544564|gb|EAY90703.1| hypothetical protein OsI_12306 [Oryza sativa Indica Group]
Length = 644
Score = 59.3 bits (142), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 85/192 (44%), Gaps = 5/192 (2%)
Query: 502 GWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCY 561
G ++ H++L +M G +YA+++ + +L S G++ + CY
Sbjct: 265 GLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCY 324
Query: 562 EALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQE-V 620
+L+ + A L EM + P F +LV QN + +LL++ +
Sbjct: 325 NTVLKGLCSAERWKEAEELLSEMFQKDCPLD-DVTFNILVDFFCQNGLVDRVIELLEQML 383
Query: 621 KEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGG 680
G D V + VI+ FCK+ L+ +A LK M S G PN ++ ++ G + G
Sbjct: 384 SHGCMPD--VITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCS-AG 440
Query: 681 KYTEVTELWGEM 692
++ + EL +M
Sbjct: 441 RWVDAEELMSQM 452
Score = 48.5 bits (114), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 59/289 (20%), Positives = 108/289 (37%), Gaps = 47/289 (16%)
Query: 447 LQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQ 506
L+P Y ++K A + KE L + +++ + DD ++ G +D+
Sbjct: 317 LKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPL--DDVTFNILVDFFCQNGLVDR 374
Query: 507 AHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQ 566
+LL++M G Y +++ + + E LL+ S G + + Y +L+
Sbjct: 375 VIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLK 434
Query: 567 SKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRI 626
A L +M + +GC N
Sbjct: 435 GLCSAGRWVDAEELMSQMIQ---------------QGCPPNPVT---------------- 463
Query: 627 DCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVT 686
+N +I+F CKK L++ A + LK+M G P+ ++ +++ G GK E
Sbjct: 464 ------FNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGK-AGKTEEAL 516
Query: 687 ELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGK 735
EL M + S + + S+ R G R N+V+ M + K
Sbjct: 517 ELLNVMVNKGISP----NTIIYSSIACALSREG---RVNKVIQMFDNIK 558
Score = 47.0 bits (110), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 64/310 (20%), Positives = 118/310 (38%), Gaps = 17/310 (5%)
Query: 447 LQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVI--TLCISLGWL 504
+ P + +V+ G+ + L ++ + + + HVI C S G+
Sbjct: 107 VPPNAYTFFPVVRGLCTRGRIADALEVL---DEMSFKGCAPIPPMYHVILEAACRSGGFR 163
Query: 505 DQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEAL 564
+ +L+ MH G + +L A E E LLR G + D Y A+
Sbjct: 164 NSVR-VLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAV 222
Query: 565 LQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQ 624
L+ + K L EM + F L+ +N GL ++ + + +
Sbjct: 223 LKGLCMAKRWGDVEELMDEMVRVDCAPN-IVTFNTLIGYLCRN---GLFERVHEVLAQMS 278
Query: 625 RIDC--GVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKY 682
C + + +I CK+ ++ A + L RM S G PN +++++ G + ++
Sbjct: 279 EHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCS-AERW 337
Query: 683 TEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFIDKYK 742
E EL EM F + D+ + ++ F + G R E++ M D
Sbjct: 338 KEAEELLSEM--FQKDCPL--DDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVIT 393
Query: 743 YRTLFLKYHK 752
Y T+ + K
Sbjct: 394 YTTVINGFCK 403
>gi|108709396|gb|ABF97191.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|215687193|dbj|BAG91758.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222625245|gb|EEE59377.1| hypothetical protein OsJ_11489 [Oryza sativa Japonica Group]
Length = 644
Score = 59.3 bits (142), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 85/192 (44%), Gaps = 5/192 (2%)
Query: 502 GWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCY 561
G ++ H++L +M G +YA+++ + +L S G++ + CY
Sbjct: 265 GLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCY 324
Query: 562 EALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQE-V 620
+L+ + A L EM + P F +LV QN + +LL++ +
Sbjct: 325 NTVLKGLCSAERWKEAEELLSEMFQKDCPLD-DVTFNILVDFFCQNGLVDRVIELLEQML 383
Query: 621 KEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGG 680
G D V + VI+ FCK+ L+ +A LK M S G PN ++ ++ G + G
Sbjct: 384 SHGCMPD--VITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCS-AG 440
Query: 681 KYTEVTELWGEM 692
++ + EL +M
Sbjct: 441 RWVDAEELMSQM 452
Score = 48.5 bits (114), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 59/289 (20%), Positives = 108/289 (37%), Gaps = 47/289 (16%)
Query: 447 LQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQ 506
L+P Y ++K A + KE L + +++ + DD ++ G +D+
Sbjct: 317 LKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPL--DDVTFNILVDFFCQNGLVDR 374
Query: 507 AHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQ 566
+LL++M G Y +++ + + E LL+ S G + + Y +L+
Sbjct: 375 VIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLK 434
Query: 567 SKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRI 626
A L +M + +GC N
Sbjct: 435 GLCSAGRWVDAEELMSQMIQ---------------QGCPPNPVT---------------- 463
Query: 627 DCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVT 686
+N +I+F CKK L++ A + LK+M G P+ ++ +++ G GK E
Sbjct: 464 ------FNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGK-AGKTEEAL 516
Query: 687 ELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGK 735
EL M + S + + S+ R G R N+V+ M + K
Sbjct: 517 ELLNVMVNKGISP----NTIIYSSIACALSREG---RVNKVIQMFDNIK 558
Score = 47.0 bits (110), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 64/310 (20%), Positives = 118/310 (38%), Gaps = 17/310 (5%)
Query: 447 LQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVI--TLCISLGWL 504
+ P + +V+ G+ + L ++ + + + HVI C S G+
Sbjct: 107 VPPNAYTFFPVVRGLCTRGRIADALEVL---DEMSFKGCAPIPPMYHVILEAACRSGGFR 163
Query: 505 DQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEAL 564
+ +L+ MH G + +L A E E LLR G + D Y A+
Sbjct: 164 NSVR-VLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAV 222
Query: 565 LQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQ 624
L+ + K L EM + F L+ +N GL ++ + + +
Sbjct: 223 LKGLCMAKRWGDVEELMDEMVRVDCAPN-IVTFNTLIGYLCRN---GLFERVHEVLAQMS 278
Query: 625 RIDC--GVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKY 682
C + + +I CK+ ++ A + L RM S G PN +++++ G + ++
Sbjct: 279 EHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCS-AERW 337
Query: 683 TEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFIDKYK 742
E EL EM F + D+ + ++ F + G R E++ M D
Sbjct: 338 KEAEELLSEM--FQKDCPL--DDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVIT 393
Query: 743 YRTLFLKYHK 752
Y T+ + K
Sbjct: 394 YTTVINGFCK 403
>gi|42570403|ref|NP_850357.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|330254930|gb|AEC10024.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 683
Score = 59.3 bits (142), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 62/280 (22%), Positives = 132/280 (47%), Gaps = 16/280 (5%)
Query: 443 EHGILQPTEKIYIKLVKAF---LEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCI 499
++GI+ P Y L+ ++ + GK KE+ + K ++ V+++ +I
Sbjct: 251 QNGII-PDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYN-----ALIDAYG 304
Query: 500 SLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDAS 559
S G+L +A ++ +M G++ + +LL A + + V +L A+S GI L+ +
Sbjct: 305 SNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTA 364
Query: 560 CYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQE 619
Y + + S I + A+ L++ M++ K+ ++ F +L+ G + + L+E
Sbjct: 365 AYNSAIGSYINAAELEKAIALYQSMRKKKV-KADSVTFTILISGSCRMSKYPEAISYLKE 423
Query: 620 VKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIG 679
+ E I +++V+ + K+ + +AE +M+ G P+ + SM+ Y A
Sbjct: 424 M-EDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYNA-S 481
Query: 680 GKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGG 719
K+ + EL+ EM+ + + D +++ F +GG
Sbjct: 482 EKWGKACELFLEME----ANGIEPDSIACSALMRAFNKGG 517
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 52/246 (21%), Positives = 108/246 (43%), Gaps = 9/246 (3%)
Query: 507 AHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQ 566
A +L+D+M A + S S Y +L+ A + RE + + G+ D + +L
Sbjct: 65 AMNLMDDMLRAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLS 124
Query: 567 SKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRI 626
+ + AL F+ MK +K+ R F +++ ++ ++ L ++E +R
Sbjct: 125 AYKSGRQYSKALSYFELMKGAKV-RPDTTTFNIIIYCLSKLGQSSQALDLFNSMRE-KRA 182
Query: 627 DC--GVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTE 684
+C V + +++H + K +++ + M + G PN ++++++ YA G T
Sbjct: 183 ECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTA 242
Query: 685 VTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFIDKYKYR 744
++ L G++K + D +L ++ R +A EV MM + + + Y
Sbjct: 243 LSVL-GDIK----QNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYN 297
Query: 745 TLFLKY 750
L Y
Sbjct: 298 ALIDAY 303
>gi|326500244|dbj|BAK06211.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 600
Score = 59.3 bits (142), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 87/417 (20%), Positives = 183/417 (43%), Gaps = 51/417 (12%)
Query: 328 FYNCLLSCHLKFGDLNSASKMVLEMLQRAKEARNSLAAAMLPFNAVGVNNRTPSEQNVNC 387
Y+CLL + K G S K+ EM R E + A++ +++ + + V
Sbjct: 166 VYSCLLHGYCKTGRWESVGKVFEEMSGRGIEPDVVMYTALI--DSLCRHGKVKKAARV-- 221
Query: 388 TNSVDLENSGIIENHILSYEDFTKDRKFVALEAEVKRVLQTLLGMLQKQVE--------L 439
+D+ +E ++++Y + E V+ L M +K V+ L
Sbjct: 222 ---MDMMTERGLEPNVVTYNVLINS---MCKEGSVREALDLRKNMSEKGVQPDVVTYNTL 275
Query: 440 ITTEHGILQPTEKIYIKLVKAFLEAGKTK---------ELTHFLIKAE--KENLQVSH-- 486
IT +L+ E + L++ ++ G+T+ + H L K ++ LQV
Sbjct: 276 ITGLSSVLEMDEAM--ALLEEMMQ-GETRVRPDLMTFNSVIHGLCKIGWMRQALQVRAMM 332
Query: 487 -DDAALGHVITLCISLGWLDQAH------DLLDEMHLAGVRASSSVYASLLKAYIEANRP 539
++ +++ + +G L + H +L+DEM +G++ S Y+ L+ + + +
Sbjct: 333 AENGCRCNLVAFNLLIGGLLRVHKVKKAMELMDEMASSGLQPDSFTYSILINGFCKMRQV 392
Query: 540 REVTALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEM-KESKIPRSGHQEFE 598
+ L + R G++ + Y LL++ Q A LF EM + K+ + +
Sbjct: 393 ERAESYLSEMRHQGMEPEPVHYIPLLKAMCDQGMMGQARDLFNEMDRNCKLDAAA---YS 449
Query: 599 MLVKGCAQNHEAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRS 658
++ G ++ E + + L+++ + I V ++ I+ F K + AE+ LK+M +
Sbjct: 450 TMIHGAFKSGEKKIAEEFLKDMIDEGLIPDAV-TYSIPINMFAKSGDLAAAERVLKQMTA 508
Query: 659 LGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTF 715
G +P+ F S++ GY A G ++ EL EM ++ + D +++ +++ +
Sbjct: 509 SGFVPDVAVFDSLIQGYGA-KGDTEKILELTREM----TAKDVALDPKIISTIVTSL 560
Score = 55.8 bits (133), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 67/309 (21%), Positives = 117/309 (37%), Gaps = 45/309 (14%)
Query: 448 QPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQA 507
+P Y L++A + + L ++ V D G +I +D A
Sbjct: 91 RPNAISYTTLMRALCADRRAAQAVGLL--RSMQDCGVRPDVVTYGTLIRGLCDAADVDTA 148
Query: 508 HDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQS 567
+LL+EM +G+ + VY+ LL Y + R V + + GI+ D Y AL+ S
Sbjct: 149 VELLNEMCESGIEPNVVVYSCLLHGYCKTGRWESVGKVFEEMSGRGIEPDVVMYTALIDS 208
Query: 568 KIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRID 627
A + M E +G N
Sbjct: 209 LCRHGKVKKAARVMDMMTE---------------RGLEPN-------------------- 233
Query: 628 CGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTE 687
V +N +I+ CK+ +++A K M G P+ T+++++TG +++ + E
Sbjct: 234 --VVTYNVLINSMCKEGSVREALDLRKNMSEKGVQPDVVTYNTLITGLSSV-LEMDEAMA 290
Query: 688 LWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFIDKYKYRTL- 746
L EM T + D +SV++ + G+ +A +V AMM E + + L
Sbjct: 291 LLEEM--MQGETRVRPDLMTFNSVIHGLCKIGWMRQALQVRAMMAENGCRCNLVAFNLLI 348
Query: 747 --FLKYHKT 753
L+ HK
Sbjct: 349 GGLLRVHKV 357
>gi|302826103|ref|XP_002994591.1| hypothetical protein SELMODRAFT_138844 [Selaginella moellendorffii]
gi|300137362|gb|EFJ04342.1| hypothetical protein SELMODRAFT_138844 [Selaginella moellendorffii]
Length = 599
Score = 59.3 bits (142), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 81/351 (23%), Positives = 151/351 (43%), Gaps = 43/351 (12%)
Query: 248 AMKPNTNTFNIALAGCLLFETTRKAEQLLDIMPRIGVKADSNLLIIMAHIYERNGRREEL 307
+ PN + + + G A ++ + M G+K D + I+ H + + GR ++
Sbjct: 222 GVSPNKMIYAMIMDGYARGGDFTAAFKVWEDMVSAGLKPDIVIYNILVHAFCKAGRMDKA 281
Query: 308 RKLQRHIDEAVNLSDIQFRQFYNCLLSCHLKFGDLNSASKMVLEMLQRAKEARNSLAAAM 367
+ +I+ L I+ Y +L ++K G++ A LE+ R K A L +
Sbjct: 282 LGVLENIEANRLLPTIET---YTSILDGYVKGGNIQKA----LEVFDRIKTA--GLRPGV 332
Query: 368 LPFNAVGVNNRTPSEQNVNCTNSVDLENSGIIENHILSYEDFTKDRKFVALEAEVKRV-- 425
+ +N++ ++ + Q +EN+ ++ N +L+ +R + AL R
Sbjct: 333 VSYNSL-LSGLAKARQ---------MENARLMLNEMLANGVVPNERSYTALTEGYARAGD 382
Query: 426 LQTLLGMLQKQVELITTEHGILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVS 485
++ GM Q+ + E+ L Y L+KA ++G + +A + Q++
Sbjct: 383 VEKAFGMFQR----MKKEN--LAIDIVAYGALLKACCKSGAMQ-------RAAEVFQQIT 429
Query: 486 HDDAALGH-VITLCISL-GW-----LDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANR 538
DA L H IT C L GW L +A DLL++M G + Y S +KA +
Sbjct: 430 --DAGLKHNRITYCTMLDGWARKGELSKARDLLNDMQKHGFHLDTICYTSFIKACFRSGD 487
Query: 539 PREVTALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKI 589
EVT L R ++++A Y L+ + D A+ +++ K S +
Sbjct: 488 TEEVTETLAVMREKKLEVNARTYTTLIHGWLAAADPDQAISCYEQAKASGL 538
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 64/334 (19%), Positives = 134/334 (40%), Gaps = 40/334 (11%)
Query: 447 LQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQ----------------------- 483
L P +Y +V+A+ +AG + + L + E+E Q
Sbjct: 118 LVPGGIVYNSIVQAYCQAGNMETVEALLAQMEEEGFQGNLGLYTTVLNGFAEIRDEEKCL 177
Query: 484 ----------VSHDDAALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAY 533
+S A G ++ L G + +A D+L+EM GV + +YA ++ Y
Sbjct: 178 SFFHRLKACGLSPTAATYGCIVKLFTKAGNMAKALDILEEMDKHGVSPNKMIYAMIMDGY 237
Query: 534 IEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSG 593
+ D SAG++ D Y L+ + AL + + ++ +++ +
Sbjct: 238 ARGGDFTAAFKVWEDMVSAGLKPDIVIYNILVHAFCKAGRMDKALGVLENIEANRLLPT- 296
Query: 594 HQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKAL 653
+ + ++ G + ++ +K + GV +N+++ K R M++A L
Sbjct: 297 IETYTSILDGYVKGGNIQKALEVFDRIKTAG-LRPGVVSYNSLLSGLAKARQMENARLML 355
Query: 654 KRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEMKSFASSTSMNFDEELLDSVLY 713
M + G +PN +++ ++ GYA G +V + +G + ++ D ++L
Sbjct: 356 NEMLANGVVPNERSYTALTEGYARAG----DVEKAFGMFQRM-KKENLAIDIVAYGALLK 410
Query: 714 TFVRGGFFARANEVVAMMEEGKMFIDKYKYRTLF 747
+ G RA EV + + + ++ Y T+
Sbjct: 411 ACCKSGAMQRAAEVFQQITDAGLKHNRITYCTML 444
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 67/306 (21%), Positives = 118/306 (38%), Gaps = 54/306 (17%)
Query: 447 LQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQ 506
L+P IY LV AF +AG+ + L E L + + ++ + G + +
Sbjct: 258 LKPDIVIYNILVHAFCKAGRMDKALGVLENIEANRLLPTIE--TYTSILDGYVKGGNIQK 315
Query: 507 AHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQ 566
A ++ D + AG+R Y SLL +A + +L + + G+ + Y AL +
Sbjct: 316 ALEVFDRIKTAGLRPGVVSYNSLLSGLAKARQMENARLMLNEMLANGVVPNERSYTALTE 375
Query: 567 SKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRI 626
D A +F+ MK KE I
Sbjct: 376 GYARAGDVEKAFGMFQRMK-----------------------------------KENLAI 400
Query: 627 DCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVT 686
D + + ++ CK MQ A + +++ G N T+ +M+ G+A G+ ++
Sbjct: 401 D--IVAYGALLKACCKSGAMQRAAEVFQQITDAGLKHNRITYCTMLDGWAR-KGELSKAR 457
Query: 687 ELWGEMKSFASSTSMNFDEELLDSVLYT-FV----RGGFFARANEVVAMMEEGKMFIDKY 741
+L +M+ LD++ YT F+ R G E +A+M E K+ ++
Sbjct: 458 DLLNDMQKHGFH---------LDTICYTSFIKACFRSGDTEEVTETLAVMREKKLEVNAR 508
Query: 742 KYRTLF 747
Y TL
Sbjct: 509 TYTTLI 514
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 60/282 (21%), Positives = 114/282 (40%), Gaps = 44/282 (15%)
Query: 507 AHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQ 566
A + M + ++ + +Y SL+ AY EA A + S GIQL+ + + +++
Sbjct: 36 ARATFEAMRASHIKPNVHIYTSLIHAYAEARDMEGAVACTEEMLSQGIQLNEAVFCSIIS 95
Query: 567 SKIVQKDTPGALHLFKEMK-ESKIP-------------RSGHQE-FEMLVKGCAQNHEAG 611
+ A H F++ K E+ +P ++G+ E E L+ AQ E G
Sbjct: 96 GYASAGNNEAAEHWFEKFKAENLVPGGIVYNSIVQAYCQAGNMETVEALL---AQMEEEG 152
Query: 612 LMAKL---------LQEVKEGQRI--------DCGVH----DWNNVIHFFCKKRLMQDAE 650
L E+++ ++ CG+ + ++ F K M A
Sbjct: 153 FQGNLGLYTTVLNGFAEIRDEEKCLSFFHRLKACGLSPTAATYGCIVKLFTKAGNMAKAL 212
Query: 651 KALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEMKSFASSTSMNFDEELLDS 710
L+ M G PN + ++ GYA GG +T ++W +M S + D + +
Sbjct: 213 DILEEMDKHGVSPNKMIYAMIMDGYAR-GGDFTAAFKVWEDM----VSAGLKPDIVIYNI 267
Query: 711 VLYTFVRGGFFARANEVVAMMEEGKMFIDKYKYRTLFLKYHK 752
+++ F + G +A V+ +E ++ Y ++ Y K
Sbjct: 268 LVHAFCKAGRMDKALGVLENIEANRLLPTIETYTSILDGYVK 309
Score = 39.7 bits (91), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 61/139 (43%), Gaps = 6/139 (4%)
Query: 595 QEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALK 654
+E+ +LV A+ H + A+ E I VH + ++IH + + R M+ A +
Sbjct: 18 REYGLLVDFYAR-HGDKVAARATFEAMRASHIKPNVHIYTSLIHAYAEARDMEGAVACTE 76
Query: 655 RMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYT 714
M S G N F S+++GYA+ G E E W E + + +S++
Sbjct: 77 EMLSQGIQLNEAVFCSIISGYASAGN--NEAAEHWFEKFKAENLVPGGI---VYNSIVQA 131
Query: 715 FVRGGFFARANEVVAMMEE 733
+ + G ++A MEE
Sbjct: 132 YCQAGNMETVEALLAQMEE 150
>gi|449444614|ref|XP_004140069.1| PREDICTED: pentatricopeptide repeat-containing protein At4g26680,
mitochondrial-like [Cucumis sativus]
gi|449528063|ref|XP_004171026.1| PREDICTED: pentatricopeptide repeat-containing protein At4g26680,
mitochondrial-like [Cucumis sativus]
Length = 536
Score = 59.3 bits (142), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 65/314 (20%), Positives = 120/314 (38%), Gaps = 36/314 (11%)
Query: 395 NSGIIENHILSYEDFTKDRKFVALEAEVKRVLQTL-LGMLQKQVELITTEHGILQPTEKI 453
+S +E H + TK RKF + E+ ++ ++++ + K E + + + + +
Sbjct: 111 SSHTLETHCIILHILTKRRKFKSAESILRSIIESCSIDFPSKLFESLLYSYRLCDSSPHV 170
Query: 454 YIKLVKAFLEAGKTKELTH---------FLIKAEKEN------LQVSHDDAALGH----- 493
+ L K F K + + FL E N L S D AL
Sbjct: 171 FDLLFKTFAHLKKFRNASDTFCRMKDYGFLPTVESCNAYLSSLLNFSRGDIALAFYREMR 230
Query: 494 -------------VITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPR 540
VI C LG LD+A+ + +EM G + + Y +L+ Y
Sbjct: 231 RSRIYPNSYTLNLVICACCKLGRLDKANVVFEEMGTMGFSPNVASYNTLIAGYCNKGLLS 290
Query: 541 EVTALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEML 600
L G+ D + L+ A LF EMK + + + +L
Sbjct: 291 SAMKLRSVMEKNGVPPDVVTFNTLVNGFCKVGKLQEASKLFGEMKGMSLSPTT-VTYNIL 349
Query: 601 VKGCAQNHEAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLG 660
+ G ++ + +L +E+ Q + + +N +I CK+ + A ++ + G
Sbjct: 350 INGYSKAGNCEMGNRLFEEMSRFQ-VKADILTYNALILGLCKEGKTKKAAYLVRELDEKG 408
Query: 661 HLPNAQTFHSMVTG 674
+PNA TF +++ G
Sbjct: 409 LVPNASTFSALIYG 422
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 54/242 (22%), Positives = 100/242 (41%), Gaps = 12/242 (4%)
Query: 521 ASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHL 580
+S V+ L K + + R + + G A L S + AL
Sbjct: 166 SSPHVFDLLFKTFAHLKKFRNASDTFCRMKDYGFLPTVESCNAYLSSLLNFSRGDIALAF 225
Query: 581 FKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFF 640
++EM+ S+I + + +++ C + + +E+ V +N +I +
Sbjct: 226 YREMRRSRIYPNSYT-LNLVICACCKLGRLDKANVVFEEMGT-MGFSPNVASYNTLIAGY 283
Query: 641 CKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEMKSFA-SST 699
C K L+ A K M G P+ TF+++V G+ + GK E ++L+GEMK + S T
Sbjct: 284 CNKGLLSSAMKLRSVMEKNGVPPDVVTFNTLVNGFCKV-GKLQEASKLFGEMKGMSLSPT 342
Query: 700 SMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFIDKYKYRTLFLKYHKTLYKGKT 759
++ + + ++ + + G N + M ++ D Y L L K +GKT
Sbjct: 343 TVTY-----NILINGYSKAGNCEMGNRLFEEMSRFQVKADILTYNALILGLCK---EGKT 394
Query: 760 PK 761
K
Sbjct: 395 KK 396
>gi|449440401|ref|XP_004137973.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g32630-like [Cucumis sativus]
Length = 606
Score = 59.3 bits (142), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 107/552 (19%), Positives = 217/552 (39%), Gaps = 53/552 (9%)
Query: 84 LVQARDPAKLSAEIENAINEHRYGDAWKLYEQHMQMDG--FPRKTLVNKILTS-FVESLD 140
L +AR A++ ++ +N+ G+ W E+ + G F ++V K F +D
Sbjct: 78 LYRARKFAEMKNVLKFIVND---GNLWSNVERIVSSIGGEFNEPSIVEKFCDMLFRVYMD 134
Query: 141 SKWLEKAYGLVEQAFEEGKQILLEKEPLIYLSLGLSKCGLPVPASTILRKLVATEQYPPV 200
++ + + + + A ++G +I ++ L L + G LR++V + V
Sbjct: 135 NRMFDSSLEVFDYARKKGFEI--DERSCFEFLLALKRSGNMELCVEFLRQMVDSGIEIRV 192
Query: 201 TAWSAILAHMSLTAPGAYLAAELILEIGYLFQDGRVDPRKKCNAPLIAMKPNTNTFNIAL 260
+W+A++ L G + A+ +++ C KP+ T+N L
Sbjct: 193 CSWTAVVD--GLCKKGEVVRAKALMD------------ELVCKG----FKPSVITYNTLL 234
Query: 261 AGCLLFETTRKAEQLLDIMPRIGVKADSNLLIIMAHIYERNGRREELRKLQRHIDEAVNL 320
G + + ++L +M + V + ++ Y R+ + EE KL DE +
Sbjct: 235 NGYIEIKDVGGVNEILSLMEKNVVDYNVTTYTMLIEWYSRSSKIEEAEKL---FDEMLKK 291
Query: 321 SDIQFRQFYNCLLSCHLKFGDLNSASKMVLEMLQRAKEARNSLAAAMLPFNAVGVNNRTP 380
Y +++ + KFG++ A + EM +R + N+ L A
Sbjct: 292 GIEPDVYIYTSIINWNCKFGNMKRAFVLFDEMTER-RLVPNAYTYGALINGACKAGEMKA 350
Query: 381 SEQNVNCTNSVDLENSGIIENHILSYEDFTKDRKFVALEAEVKRVLQTLLGMLQKQVELI 440
+E VN D+++ G+ N ++ F + + L+ M QK E+
Sbjct: 351 AEMMVN-----DMQSKGVDVNRVI----FNTLMDGYCKKGMIDEALRLQNIMQQKGFEID 401
Query: 441 TTEHGILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCIS 500
I + F + + +E L+ E+ V+ + + +I +
Sbjct: 402 AFTCNI----------IASGFCRSNRREEAKRLLLTMEERG--VAPNVVSFSILIDIYCK 449
Query: 501 LGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASC 560
+A L M G S Y + ++ Y + + E L+ + + G+ D
Sbjct: 450 EQNFAEARRLFKVMEKKGKAPSVVTYNAFIERYCKKGKMEEAYKLINEMQERGLMPDTYT 509
Query: 561 YEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEV 620
Y +L+ + + AL LF EM + + R+ + +++ G +++ A KL E+
Sbjct: 510 YTSLIDGERASGNVDRALELFNEMPQLGLNRN-VVTYTVIISGLSKDGRADEAFKLYDEM 568
Query: 621 -KEGQRIDCGVH 631
KEG D G++
Sbjct: 569 NKEGIVPDDGIY 580
Score = 43.1 bits (100), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 76/181 (41%), Gaps = 8/181 (4%)
Query: 502 GWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCY 561
G + +A L+DE+ G + S Y +LL YIE V +L + + + Y
Sbjct: 206 GEVVRAKALMDELVCKGFKPSVITYNTLLNGYIEIKDVGGVNEILSLMEKNVVDYNVTTY 265
Query: 562 EALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAK---LLQ 618
L++ A LF EM + I + ++ C + G M + L
Sbjct: 266 TMLIEWYSRSSKIEEAEKLFDEMLKKGIEPDVYIYTSIINWNC----KFGNMKRAFVLFD 321
Query: 619 EVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAI 678
E+ E +R+ + + +I+ CK M+ AE + M+S G N F++++ GY
Sbjct: 322 EMTE-RRLVPNAYTYGALINGACKAGEMKAAEMMVNDMQSKGVDVNRVIFNTLMDGYCKK 380
Query: 679 G 679
G
Sbjct: 381 G 381
Score = 41.2 bits (95), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 57/308 (18%), Positives = 117/308 (37%), Gaps = 25/308 (8%)
Query: 447 LQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGW--- 503
+P+ Y L+ ++E + L EK + +V T + + W
Sbjct: 223 FKPSVITYNTLLNGYIEIKDVGGVNEILSLMEKNVVDY--------NVTTYTMLIEWYSR 274
Query: 504 ---LDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASC 560
+++A L DEM G+ +Y S++ + + L + + +A
Sbjct: 275 SSKIEEAEKLFDEMLKKGIEPDVYIYTSIINWNCKFGNMKRAFVLFDEMTERRLVPNAYT 334
Query: 561 YEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLM--AKLLQ 618
Y AL+ + A + +M +SK F L+ G + G++ A LQ
Sbjct: 335 YGALINGACKAGEMKAAEMMVNDM-QSKGVDVNRVIFNTLMDGYCKK---GMIDEALRLQ 390
Query: 619 EVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAI 678
+ + + + N + FC+ ++A++ L M G PN +F ++ Y
Sbjct: 391 NIMQQKGFEIDAFTCNIIASGFCRSNRREEAKRLLLTMEERGVAPNVVSFSILIDIYCK- 449
Query: 679 GGKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFI 738
+ E L+ M+ + S+ ++ + + + G A +++ M+E +
Sbjct: 450 EQNFAEARRLFKVMEKKGKAPSV----VTYNAFIERYCKKGKMEEAYKLINEMQERGLMP 505
Query: 739 DKYKYRTL 746
D Y Y +L
Sbjct: 506 DTYTYTSL 513
>gi|30688764|ref|NP_850356.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75158748|sp|Q8RWS8.1|PP199_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g41720; AltName: Full=Protein EMBRYO DEFECTIVE 2654
gi|20268762|gb|AAM14084.1| putative salt-inducible protein [Arabidopsis thaliana]
gi|21436141|gb|AAM51317.1| putative salt-inducible protein [Arabidopsis thaliana]
gi|330254931|gb|AEC10025.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 822
Score = 59.3 bits (142), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 62/280 (22%), Positives = 132/280 (47%), Gaps = 16/280 (5%)
Query: 443 EHGILQPTEKIYIKLVKAF---LEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCI 499
++GI+ P Y L+ ++ + GK KE+ + K ++ V+++ +I
Sbjct: 383 QNGII-PDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYN-----ALIDAYG 436
Query: 500 SLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDAS 559
S G+L +A ++ +M G++ + +LL A + + V +L A+S GI L+ +
Sbjct: 437 SNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTA 496
Query: 560 CYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQE 619
Y + + S I + A+ L++ M++ K+ ++ F +L+ G + + L+E
Sbjct: 497 AYNSAIGSYINAAELEKAIALYQSMRKKKV-KADSVTFTILISGSCRMSKYPEAISYLKE 555
Query: 620 VKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIG 679
+ E I +++V+ + K+ + +AE +M+ G P+ + SM+ Y A
Sbjct: 556 M-EDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYNA-S 613
Query: 680 GKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGG 719
K+ + EL+ EM+ + + D +++ F +GG
Sbjct: 614 EKWGKACELFLEME----ANGIEPDSIACSALMRAFNKGG 649
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 52/246 (21%), Positives = 108/246 (43%), Gaps = 9/246 (3%)
Query: 507 AHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQ 566
A +L+D+M A + S S Y +L+ A + RE + + G+ D + +L
Sbjct: 197 AMNLMDDMLRAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLS 256
Query: 567 SKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRI 626
+ + AL F+ MK +K+ R F +++ ++ ++ L ++E +R
Sbjct: 257 AYKSGRQYSKALSYFELMKGAKV-RPDTTTFNIIIYCLSKLGQSSQALDLFNSMRE-KRA 314
Query: 627 DC--GVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTE 684
+C V + +++H + K +++ + M + G PN ++++++ YA G T
Sbjct: 315 ECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTA 374
Query: 685 VTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFIDKYKYR 744
++ L G++K + D +L ++ R +A EV MM + + + Y
Sbjct: 375 LSVL-GDIK----QNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYN 429
Query: 745 TLFLKY 750
L Y
Sbjct: 430 ALIDAY 435
>gi|15240478|ref|NP_198079.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635757|sp|O04647.2|PP399_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g27270; AltName: Full=Protein EMBRYO DEFECTIVE 976
gi|332006282|gb|AED93665.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 1038
Score = 59.3 bits (142), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 90/204 (44%), Gaps = 4/204 (1%)
Query: 457 LVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQAHDLLDEMHL 516
LV A GK +E H ++N+++ D +I + G L A ++ + MH
Sbjct: 745 LVNALTNRGKHREAEHISRTCLEKNIEL--DTVGYNTLIKAMLEAGKLQCASEIYERMHT 802
Query: 517 AGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQKDTPG 576
+GV S Y +++ Y + + + +AR +G+ LD Y ++
Sbjct: 803 SGVPCSIQTYNTMISVYGRGLQLDKAIEIFSNARRSGLYLDEKIYTNMIMHYGKGGKMSE 862
Query: 577 ALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRIDCGVHDWNNV 636
AL LF EM++ I + G + M+VK CA + + +LLQ ++ R + + +
Sbjct: 863 ALSLFSEMQKKGI-KPGTPSYNMMVKICATSRLHHEVDELLQAMERNGRC-TDLSTYLTL 920
Query: 637 IHFFCKKRLMQDAEKALKRMRSLG 660
I + + +AEK + ++ G
Sbjct: 921 IQVYAESSQFAEAEKTITLVKEKG 944
>gi|359476104|ref|XP_003631789.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
mitochondrial-like [Vitis vinifera]
Length = 877
Score = 59.3 bits (142), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 98/443 (22%), Positives = 170/443 (38%), Gaps = 56/443 (12%)
Query: 251 PNTNTFNIALAGCLLFETTRKAEQLLDIMPRIGVKADSNLLIIMAHIYERNGRREELRKL 310
PN T+++ + GC KA +L M G+ + + Y + EE KL
Sbjct: 398 PNKVTYSVLIEGCCNSGNIEKASELYTQMKLNGIPPSVFNVNSLLRGYLKAPLWEEASKL 457
Query: 311 QRHIDEAVNLSDIQFRQFYNCLLSCHLKFGDLNSASKMVLEMLQRAKEARNSLAAAMLPF 370
DEAV+ YN ++S K G ++ A ++ M+ + M+P
Sbjct: 458 ---FDEAVDCGVANIFT-YNIMMSWLCKGGKMDEACSLLDNMVNQG----------MVP- 502
Query: 371 NAVGVNNRTPS---EQNVNCTNSV-------DLENSGIIENHILSYEDFTKDRKFVALEA 420
N V N+ + N++ +SV DL+ ++ IL +F K
Sbjct: 503 NVVSYNDMILGHCRKGNMDMASSVFSDMLARDLK-PNVVTYSILIDGNFKK--------G 553
Query: 421 EVKRVLQTLLGMLQKQVELITTEHGILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKE 480
+ ++ L ML + PT+ + ++ + G+ E L +E
Sbjct: 554 DSEKALDLFDQMLSLNI----------APTDFTFNTIINGLCKVGQMSEARDKLKNFLEE 603
Query: 481 NLQVSHDDAALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPR 540
S ++ I G +D A + EM GV + Y SL+ + ++NR
Sbjct: 604 GFIPSC--MTYNSIVDGFIKEGNIDSALAVYREMCEFGVSPNVVTYTSLINGFCKSNRID 661
Query: 541 EVTALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEML 600
+ R G++LD + Y AL+ ++D A LF E+ E + + +
Sbjct: 662 LALKTRDEMREKGLELDVTAYSALIDGFCKRRDMESAQDLFFELLEVGL-SPNRIVYNSM 720
Query: 601 VKGCA--QNHEAGLM--AKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRM 656
+ G N EA L+ K++ + RI C + + +I K+ + A M
Sbjct: 721 ISGFRDLNNMEAALVWYKKMIND-----RIPCDLGTYTTLIDGLLKEGRLVFASDLYMEM 775
Query: 657 RSLGHLPNAQTFHSMVTGYAAIG 679
S G +P+ TFH +V G G
Sbjct: 776 LSKGIVPDIITFHVLVNGLCNKG 798
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 82/197 (41%), Gaps = 13/197 (6%)
Query: 488 DAALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLR 547
+A VI C++ G + +A L +EM G + V SL+K Y L
Sbjct: 330 EATFTSVIVACVAQGNMVEALRLKEEMINCGKPMNLVVATSLMKGYCAQGNLDSALNLFN 389
Query: 548 DARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQN 607
G+ + Y L++ + A L+ +MK + IP S +L
Sbjct: 390 KITEDGLFPNKVTYSVLIEGCCNSGNIEKASELYTQMKLNGIPPSVFNVNSLL------- 442
Query: 608 HEAGLMAKLLQEVKE--GQRIDCGVHD---WNNVIHFFCKKRLMQDAEKALKRMRSLGHL 662
L A L +E + + +DCGV + +N ++ + CK M +A L M + G +
Sbjct: 443 -RGYLKAPLWEEASKLFDEAVDCGVANIFTYNIMMSWLCKGGKMDEACSLLDNMVNQGMV 501
Query: 663 PNAQTFHSMVTGYAAIG 679
PN +++ M+ G+ G
Sbjct: 502 PNVVSYNDMILGHCRKG 518
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 46/204 (22%), Positives = 93/204 (45%), Gaps = 11/204 (5%)
Query: 494 VITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAG 553
++T + + + DL ++M L G+ +++A ++ R E R+ + G
Sbjct: 231 LLTALVRRNMIGELRDLYNKMVLRGIYGDHFTVHVMVRACLKEGRVEEAEEYFRETKERG 290
Query: 554 IQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLM 613
++LDA Y ++Q+ + ++ L L +EMKE S ++V AQ G M
Sbjct: 291 VKLDAGAYSIIIQAVCKKPNSNLGLELLEEMKERGWVPSEATFTSVIVACVAQ----GNM 346
Query: 614 AKLLQEVKEGQRIDCG----VHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFH 669
+ L+ +KE + I+CG + +++ +C + + A ++ G PN T+
Sbjct: 347 VEALR-LKE-EMINCGKPMNLVVATSLMKGYCAQGNLDSALNLFNKITEDGLFPNKVTYS 404
Query: 670 SMVTGYAAIGGKYTEVTELWGEMK 693
++ G G + +EL+ +MK
Sbjct: 405 VLIEG-CCNSGNIEKASELYTQMK 427
Score = 44.7 bits (104), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 96/233 (41%), Gaps = 27/233 (11%)
Query: 525 VYASLLKAYIEANRPREVTALLRDARSAGIQLDA---SCYEALLQSKIVQKDTPGALH-L 580
V+ LL AYI ANR D +A I D Y +L + +V+++ G L L
Sbjct: 192 VFNYLLNAYIRANRIENAI----DCFNAMICQDVIPWVPYMNILLTALVRRNMIGELRDL 247
Query: 581 FKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKE-GQRIDCGVHDWNNVIHF 639
+ +M I H ++V+ C + + +E KE G ++D G + +I
Sbjct: 248 YNKMVLRGI-YGDHFTVHVMVRACLKEGRVEEAEEYFRETKERGVKLDAGAYSI--IIQA 304
Query: 640 FCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEMKSFASST 699
CKK + L+ M+ G +P+ TF S++ A G E L EM +
Sbjct: 305 VCKKPNSNLGLELLEEMKERGWVPSEATFTSVIVACVA-QGNMVEALRLKEEMINCGKPM 363
Query: 700 SMNFDEELLDSVLYTFVRGGFFARANEVVAM-----MEEGKMFIDKYKYRTLF 747
++ V+ T + G+ A+ N A+ + E +F +K Y L
Sbjct: 364 NL---------VVATSLMKGYCAQGNLDSALNLFNKITEDGLFPNKVTYSVLI 407
>gi|240255936|ref|NP_193372.6| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|374095491|sp|Q8GWE0.3|PP314_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g16390, chloroplastic; AltName: Full=Chloroplastic
RNA-binding protein P67; Flags: Precursor
gi|332658341|gb|AEE83741.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 702
Score = 59.3 bits (142), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 52/241 (21%), Positives = 103/241 (42%), Gaps = 7/241 (2%)
Query: 448 QPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQA 507
+P ++ A+ AG +A E ++ D +I + G D
Sbjct: 242 EPDNVTMAAMIDAYGRAGNVDMALSLYDRARTEKWRI--DAVTFSTLIRIYGVSGNYDGC 299
Query: 508 HDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQS 567
++ +EM GV+ + +Y L+ + A RP + + +D + G + S Y AL+++
Sbjct: 300 LNIYEEMKALGVKPNLVIYNRLIDSMGRAKRPWQAKIIYKDLITNGFTPNWSTYAALVRA 359
Query: 568 KIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRID 627
+ AL +++EMKE + + + L+ CA N ++ Q++K + D
Sbjct: 360 YGRARYGDDALAIYREMKEKGLSLTVIL-YNTLLSMCADNRYVDEAFEIFQDMKNCETCD 418
Query: 628 CGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTE 687
++++I + + +AE AL +MR G P S++ Y GK +V +
Sbjct: 419 PDSWTFSSLITVYACSGRVSEAEAALLQMREAGFEPTLFVLTSVIQCY----GKAKQVDD 474
Query: 688 L 688
+
Sbjct: 475 V 475
>gi|168049914|ref|XP_001777406.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162671255|gb|EDQ57810.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 570
Score = 59.3 bits (142), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 51/248 (20%), Positives = 104/248 (41%), Gaps = 10/248 (4%)
Query: 449 PTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQAH 508
P Y ++ + + GK E +K + D G ++ L G++ A
Sbjct: 111 PDAVTYSTMIDVYGKVGKYDEAVALYESVKKSGWK--PDKVTYGTMVRLFGRAGYISAAV 168
Query: 509 DLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSK 568
+ DEM +G++ S VY ++ A R + ++ + AG++ +A +++
Sbjct: 169 SIFDEMKGSGIQPGSVVYNIMISCLGRAGRMGHALKVFQEMKQAGVKPNAVTLSTVMEIY 228
Query: 569 IVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRIDC 628
L +F M++ + ++K C EAGL+ + Q ++E
Sbjct: 229 SRSGKVMEGLGIFHHMRQDL--ACDIIVYNAVIKMC---REAGLVPEAEQYLREMVEYGH 283
Query: 629 GVHDWN--NVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVT 686
+DW N+I + K + +A++ ++ G+ P+ ++ S++ GY Y +V
Sbjct: 284 QPNDWTYRNMISLYAKNGMAVEAQRMFSQLVEAGYQPDVMSYTSLLQGYGN-AKDYEKVQ 342
Query: 687 ELWGEMKS 694
E+ EM S
Sbjct: 343 EILHEMVS 350
>gi|125580078|gb|EAZ21224.1| hypothetical protein OsJ_36877 [Oryza sativa Japonica Group]
Length = 726
Score = 59.3 bits (142), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 51/245 (20%), Positives = 104/245 (42%), Gaps = 4/245 (1%)
Query: 435 KQVELITTEHGILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHV 494
++V + G+ + TE+ + +L+ ++ AGK + L +K+ + D +
Sbjct: 147 RRVVRLMIRRGVRRGTEQ-FAQLMLSYSRAGKLRSAMRVLHLMQKDG--CAPDISICNMA 203
Query: 495 ITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGI 554
+ + + G +D+A + + M GV Y L+K A R + ++ G
Sbjct: 204 VNVLVVAGRVDKALEFAERMRRVGVEPDVYTYNCLIKGLCGARRVVDAMEMIGVMLQNGC 263
Query: 555 QLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMA 614
D Y ++ +K L + M+ + +L+ G A++ A
Sbjct: 264 PPDKISYYTVMSFLCKEKRVEEVRGLLQRMRNDAGLFPDQVTYNVLIHGLAKHGHADEAL 323
Query: 615 KLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTG 674
+ L+E EG+R ++ ++H FC M +A++ + M S G P+ T+ ++V G
Sbjct: 324 EFLRE-SEGKRFRVDEVGYSAIVHSFCLNGRMAEAKEIVGEMISKGCQPDVVTYSTVVDG 382
Query: 675 YAAIG 679
+ IG
Sbjct: 383 FCRIG 387
>gi|27545040|gb|AAO18446.1| putative chloroplast RNA processing protein [Oryza sativa Japonica
Group]
gi|108711829|gb|ABF99624.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 863
Score = 59.3 bits (142), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 56/247 (22%), Positives = 104/247 (42%), Gaps = 12/247 (4%)
Query: 487 DDAALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALL 546
D A+ H++ G L + +L EM G S Y L++A+ E A+L
Sbjct: 280 DTASYRHIVDAFAGAGNLSRVAELFAEMSATGHTPDPSAYLGLMEAHTLVGATAEAVAVL 339
Query: 547 RDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQ 606
R ++ G A+ Y LL Q G LF+EM+ + P + + +L +
Sbjct: 340 RQMQADGCPPTAATYRVLLDLYGRQGRFDGVRELFREMRTTVPPDTA--TYNVLFRVFGD 397
Query: 607 NHEAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQ 666
+ +L Q++ + ++ + NV+ + L +DA + L + + G +P A+
Sbjct: 398 GGFFKEVVELFQDMLHSE-VEPDIDTCENVMVACGRGGLHEDAREVLDYITTEGMVPTAK 456
Query: 667 TFHSMVT--GYAAIGGKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARA 724
+ +V G+AA+ Y E + M S ++ E +++ F +GG F A
Sbjct: 457 AYTGLVEALGHAAM---YEEAYVAFNMMTEIGSLPTI----ETYNALANAFAKGGLFQEA 509
Query: 725 NEVVAMM 731
+ + M
Sbjct: 510 EAIFSRM 516
Score = 41.2 bits (95), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 56/238 (23%), Positives = 104/238 (43%), Gaps = 22/238 (9%)
Query: 505 DQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPR-------EVTALLRDARSAGIQLD 557
++A +LLD+M +GV +++ Y ++L A A P + A +R S ++ D
Sbjct: 186 EEARELLDQMKASGVAPTAATYNTVLAACARATDPPVPFDMLLGLFAEMRHDPSPSVRPD 245
Query: 558 ASCYEALLQSKIVQKDTPGALHLFKEMKESKI-PRSGHQEFEMLVKGCAQNHEAGLMAKL 616
+ Y LL + V+ + + L + M E+ + P + + +V A +A+L
Sbjct: 246 LTTYNTLLAAAAVRALSDQSEMLLRTMLEAGVLPDTA--SYRHIVDAFAGAGNLSRVAEL 303
Query: 617 LQEVK-EGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGY 675
E+ G D + H +A L++M++ G P A T+ ++ Y
Sbjct: 304 FAEMSATGHTPDPSAYLGLMEAHTLVGA--TAEAVAVLRQMQADGCPPTAATYRVLLDLY 361
Query: 676 AAIGGKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEE 733
G++ V EL+ EM+ T++ D + + F GGFF EVV + ++
Sbjct: 362 GR-QGRFDGVRELFREMR-----TTVPPDTATYNVLFRVFGDGGFF---KEVVELFQD 410
>gi|242063942|ref|XP_002453260.1| hypothetical protein SORBIDRAFT_04g002660 [Sorghum bicolor]
gi|241933091|gb|EES06236.1| hypothetical protein SORBIDRAFT_04g002660 [Sorghum bicolor]
Length = 866
Score = 59.3 bits (142), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 91/213 (42%), Gaps = 11/213 (5%)
Query: 522 SSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLF 581
++ VY L+ A + +R V AL +D +G Q D LLQ+ A +F
Sbjct: 109 TTPVYNRLILAALRESRLDLVEALYKDLLLSGAQPDVFTRNLLLQALCDAGRMELAQRVF 168
Query: 582 KEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFC 641
M P F +L +G + + K+L + + C N V+ FC
Sbjct: 169 DAM-----PARNEFSFGILARGYCRAGRSIDALKVLDGMPSMNLVVC-----NTVVAGFC 218
Query: 642 KKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEMKSFASSTSM 701
K+ L+++AE+ ++RMR G PN TF++ ++ G+ + ++ +M+
Sbjct: 219 KEGLVEEAERLVERMRVQGLAPNVVTFNARISALCK-AGRVLDAYRIFQDMQEDWQHGLP 277
Query: 702 NFDEELLDSVLYTFVRGGFFARANEVVAMMEEG 734
D+ D +L F GF A +V +M G
Sbjct: 278 RPDQVTFDVMLSGFCDAGFVDEARVLVDIMRCG 310
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 68/323 (21%), Positives = 131/323 (40%), Gaps = 35/323 (10%)
Query: 449 PTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQAH 508
P Y L+++ AG+T E L + ++ S D A +I LD A
Sbjct: 419 PNSFTYNVLLQSLWRAGRTTEAERLLERMNEKG--YSLDTAGCNIIIDGLCRNSRLDVAM 476
Query: 509 DLLDEMHLAG-------------VRASSSV----------YASLLKAYIEANRPREVTAL 545
D++D M G V + SS+ Y+ L+ A + R E
Sbjct: 477 DIVDGMWEEGSGALGRLGNSFLSVVSDSSISQRCLPDQITYSILISALCKEGRFDEAKKK 536
Query: 546 LRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCA 605
L + I D+ Y+ + T A+ + ++M E K + + +L++G
Sbjct: 537 LLEMIVKDISPDSVIYDTFIHGYCKHGKTSLAIKVLRDM-EKKGCNPSTRTYNLLIRGFE 595
Query: 606 QNHEAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNA 665
+ H++ + KL+ E+KE + I V +N++I FC++ ++ A L M +PN
Sbjct: 596 EKHKSEEIMKLMSEMKE-KGISPNVMTYNSLIKSFCQQGMVNKAMPLLDEMLQNELVPNI 654
Query: 666 QTFHSMVTGYAAIGGKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYT-FVRGGFFARA 724
+F ++ Y ++T+ F ++ +E+L ++ T G + A
Sbjct: 655 TSFDLLIKAYC-------KITDFPSAQMVFDAALRTCGQKEVLYCLMCTELTTYGKWIEA 707
Query: 725 NEVVAMMEEGKMFIDKYKYRTLF 747
++ M E ++ I + Y+ +
Sbjct: 708 KNILEMALEMRVSIQSFPYKQII 730
Score = 45.4 bits (106), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 72/336 (21%), Positives = 132/336 (39%), Gaps = 40/336 (11%)
Query: 444 HGILQPTEKIYIKLVKAFLEAGKT---KELTHFLIKAEKENLQVSHDDAALGHVITLCIS 500
H +QP Y +V + GK + + +F+ +S D ++ S
Sbjct: 344 HEGIQPNSYTYNIIVSGLCKEGKAFDARRVENFIRSG-----VMSPDVVTYTSLLHAYCS 398
Query: 501 LGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLR---------DARS 551
G + A+ +LDEM G +S Y LL++ A R E LL D
Sbjct: 399 KGNIAAANRILDEMAQKGCAPNSFTYNVLLQSLWRAGRTTEAERLLERMNEKGYSLDTAG 458
Query: 552 AGIQLDASCYEALLQSKI-----VQKDTPGAL-----HLFKEMKESKIPRSGHQE---FE 598
I +D C + L + + ++ GAL + +S I + + +
Sbjct: 459 CNIIIDGLCRNSRLDVAMDIVDGMWEEGSGALGRLGNSFLSVVSDSSISQRCLPDQITYS 518
Query: 599 MLVKG-CAQNHEAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMR 657
+L+ C + KLL+ + + D ++D IH +CK A K L+ M
Sbjct: 519 ILISALCKEGRFDEAKKKLLEMIVKDISPDSVIYD--TFIHGYCKHGKTSLAIKVLRDME 576
Query: 658 SLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEMKSFA-SSTSMNFDEELLDSVLYTFV 716
G P+ +T++ ++ G+ K E+ +L EMK S M + +S++ +F
Sbjct: 577 KKGCNPSTRTYNLLIRGFEE-KHKSEEIMKLMSEMKEKGISPNVMTY-----NSLIKSFC 630
Query: 717 RGGFFARANEVVAMMEEGKMFIDKYKYRTLFLKYHK 752
+ G +A ++ M + ++ + + L Y K
Sbjct: 631 QQGMVNKAMPLLDEMLQNELVPNITSFDLLIKAYCK 666
Score = 43.9 bits (102), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 65/303 (21%), Positives = 127/303 (41%), Gaps = 37/303 (12%)
Query: 457 LVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQAHDLLDEMHL 516
L++A +AG+ EL + A + S A G+ C + +D A +LD M
Sbjct: 151 LLQALCDAGRM-ELAQRVFDAMPARNEFSFGILARGY----CRAGRSID-ALKVLDGMPS 204
Query: 517 AGVRASSSVYASLLKAYI--EANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQKDT 574
+ ++V A K + EA R L+ R G+ + + A + +
Sbjct: 205 MNLVVCNTVVAGFCKEGLVEEAER------LVERMRVQGLAPNVVTFNARISALCKAGRV 258
Query: 575 PGALHLFKEMKES---KIPRSGHQEFEMLVKGCAQNHEAGLM--AKLLQEVKEGQRIDCG 629
A +F++M+E +PR F++++ G +AG + A++L ++ + CG
Sbjct: 259 LDAYRIFQDMQEDWQHGLPRPDQVTFDVMLSGFC---DAGFVDEARVLVDI-----MRCG 310
Query: 630 -----VHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTE 684
V +N + + + +A++ L+ M G PN+ T++ +V+G G +
Sbjct: 311 GFLRRVESYNRWLSGLVRNGRVGEAQELLREMAHEGIQPNSYTYNIIVSGLCKEGKAFDA 370
Query: 685 VTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFIDKYKYR 744
+++F S M+ D S+L+ + G A AN ++ M + + + Y
Sbjct: 371 -----RRVENFIRSGVMSPDVVTYTSLLHAYCSKGNIAAANRILDEMAQKGCAPNSFTYN 425
Query: 745 TLF 747
L
Sbjct: 426 VLL 428
>gi|115456295|ref|NP_001051748.1| Os03g0824100 [Oryza sativa Japonica Group]
gi|113550219|dbj|BAF13662.1| Os03g0824100, partial [Oryza sativa Japonica Group]
Length = 691
Score = 59.3 bits (142), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 56/247 (22%), Positives = 104/247 (42%), Gaps = 12/247 (4%)
Query: 487 DDAALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALL 546
D A+ H++ G L + +L EM G S Y L++A+ E A+L
Sbjct: 108 DTASYRHIVDAFAGAGNLSRVAELFAEMSATGHTPDPSAYLGLMEAHTLVGATAEAVAVL 167
Query: 547 RDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQ 606
R ++ G A+ Y LL Q G LF+EM+ + P + + +L +
Sbjct: 168 RQMQADGCPPTAATYRVLLDLYGRQGRFDGVRELFREMRTTVPPDTA--TYNVLFRVFGD 225
Query: 607 NHEAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQ 666
+ +L Q++ + ++ + NV+ + L +DA + L + + G +P A+
Sbjct: 226 GGFFKEVVELFQDMLHSE-VEPDIDTCENVMVACGRGGLHEDAREVLDYITTEGMVPTAK 284
Query: 667 TFHSMVT--GYAAIGGKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARA 724
+ +V G+AA+ Y E + M S ++ E +++ F +GG F A
Sbjct: 285 AYTGLVEALGHAAM---YEEAYVAFNMMTEIGSLPTI----ETYNALANAFAKGGLFQEA 337
Query: 725 NEVVAMM 731
+ + M
Sbjct: 338 EAIFSRM 344
>gi|77557056|gb|ABA99852.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
Length = 726
Score = 59.3 bits (142), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 51/245 (20%), Positives = 104/245 (42%), Gaps = 4/245 (1%)
Query: 435 KQVELITTEHGILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHV 494
++V + G+ + TE+ + +L+ ++ AGK + L +K+ + D +
Sbjct: 147 RRVVRLMIRRGVRRGTEQ-FAQLMLSYSRAGKLRSAMRVLHLMQKDG--CAPDISICNMA 203
Query: 495 ITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGI 554
+ + + G +D+A + + M GV Y L+K A R + ++ G
Sbjct: 204 VNVLVVAGRVDKALEFAERMRRVGVEPDVYTYNCLIKGLCGARRVVDAMEMIGVMLQNGC 263
Query: 555 QLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMA 614
D Y ++ +K L + M+ + +L+ G A++ A
Sbjct: 264 PPDKISYYTVMSFLCKEKRVEEVRGLLQRMRNDAGLFPDQVTYNVLIHGLAKHGHADEAL 323
Query: 615 KLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTG 674
+ L+E EG+R ++ ++H FC M +A++ + M S G P+ T+ ++V G
Sbjct: 324 EFLRE-SEGKRFRVDEVGYSAIVHSFCLNGRMAEAKEIVGEMISKGCQPDVVTYSTVVDG 382
Query: 675 YAAIG 679
+ IG
Sbjct: 383 FCRIG 387
>gi|356530296|ref|XP_003533718.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g18940-like [Glycine max]
Length = 830
Score = 59.3 bits (142), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 56/287 (19%), Positives = 112/287 (39%), Gaps = 43/287 (14%)
Query: 448 QPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQA 507
+P +Y +++ F +AG E L + E N D + + G+LD+
Sbjct: 319 KPGTVMYNSMLQVFGKAGIYTEALSILKEMEDNN--CPPDSITYNELAATYVRAGFLDEG 376
Query: 508 HDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQS 567
++D M GV ++ Y +++ AY +A R + L + G + Y ++L
Sbjct: 377 MAVIDTMTSKGVMPNAITYTTVIDAYGKAGREDDALRLFSKMKDLGCAPNVYTYNSVLAM 436
Query: 568 KIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRID 627
+ T + + EMK + GCA N
Sbjct: 437 LGKKSRTEDVIKVLCEMK---------------LNGCAPNRAT----------------- 464
Query: 628 CGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTE 687
WN ++ ++ K L+ M++ G P+ TF+++++ YA G + + +
Sbjct: 465 -----WNTMLAVCSEEGKHNYVNKVLREMKNCGFEPDKDTFNTLISSYARCGSE-VDSAK 518
Query: 688 LWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEG 734
++GEM + + LL+++ + RG + A + + M +G
Sbjct: 519 MYGEMVKSGFTPCVTTYNALLNALAH---RGDWKAAESVIQDMQTKG 562
Score = 42.7 bits (99), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 30/49 (61%)
Query: 630 VHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAI 678
V +N VI FC+K LMQ+A + L M + G P T+++ ++GYA +
Sbjct: 707 VVSYNTVIKGFCRKGLMQEAIRVLSEMTTKGIQPTIVTYNTFLSGYAGM 755
>gi|449531231|ref|XP_004172591.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g32630-like, partial [Cucumis sativus]
Length = 602
Score = 59.3 bits (142), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 107/552 (19%), Positives = 217/552 (39%), Gaps = 53/552 (9%)
Query: 84 LVQARDPAKLSAEIENAINEHRYGDAWKLYEQHMQMDG--FPRKTLVNKILTS-FVESLD 140
L +AR A++ ++ +N+ G+ W E+ + G F ++V K F +D
Sbjct: 74 LYRARKFAEMKNVLKFIVND---GNLWSNVERIVSSIGGEFNEPSIVEKFCDMLFRVYMD 130
Query: 141 SKWLEKAYGLVEQAFEEGKQILLEKEPLIYLSLGLSKCGLPVPASTILRKLVATEQYPPV 200
++ + + + + A ++G +I ++ L L + G LR++V + V
Sbjct: 131 NRMFDSSLEVFDYARKKGFEI--DERSCFEFLLALKRSGNMELCVEFLRQMVDSGIEIRV 188
Query: 201 TAWSAILAHMSLTAPGAYLAAELILEIGYLFQDGRVDPRKKCNAPLIAMKPNTNTFNIAL 260
+W+A++ L G + A+ +++ C KP+ T+N L
Sbjct: 189 CSWTAVVD--GLCKKGEVVRAKALMD------------ELVCKG----FKPSVITYNTLL 230
Query: 261 AGCLLFETTRKAEQLLDIMPRIGVKADSNLLIIMAHIYERNGRREELRKLQRHIDEAVNL 320
G + + ++L +M + V + ++ Y R+ + EE KL DE +
Sbjct: 231 NGYIEIKDVGGVNEILSLMEKNVVDYNVTTYTMLIEWYSRSSKIEEAEKL---FDEMLKK 287
Query: 321 SDIQFRQFYNCLLSCHLKFGDLNSASKMVLEMLQRAKEARNSLAAAMLPFNAVGVNNRTP 380
Y +++ + KFG++ A + EM +R + N+ L A
Sbjct: 288 GIEPDVYIYTSIINWNCKFGNMKRAFVLFDEMTER-RLVPNAYTYGALINGACKAGEMKA 346
Query: 381 SEQNVNCTNSVDLENSGIIENHILSYEDFTKDRKFVALEAEVKRVLQTLLGMLQKQVELI 440
+E VN D+++ G+ N ++ F + + L+ M QK E+
Sbjct: 347 AEMMVN-----DMQSKGVDVNRVI----FNTLMDGYCKKGMIDEALRLQNIMQQKGFEID 397
Query: 441 TTEHGILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCIS 500
I + F + + +E L+ E+ V+ + + +I +
Sbjct: 398 AFTCNI----------IASGFCRSNRREEAKRLLLTMEERG--VAPNVVSFSILIDIYCK 445
Query: 501 LGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASC 560
+A L M G S Y + ++ Y + + E L+ + + G+ D
Sbjct: 446 EQNFAEARRLFKVMEKKGKAPSVVTYNAFIERYCKKGKMEEAYKLINEMQERGLMPDTYT 505
Query: 561 YEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEV 620
Y +L+ + + AL LF EM + + R+ + +++ G +++ A KL E+
Sbjct: 506 YTSLIDGERASGNVDRALELFNEMPQLGLNRN-VVTYTVIISGLSKDGRADEAFKLYDEM 564
Query: 621 -KEGQRIDCGVH 631
KEG D G++
Sbjct: 565 NKEGIVPDDGIY 576
Score = 43.1 bits (100), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 76/181 (41%), Gaps = 8/181 (4%)
Query: 502 GWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCY 561
G + +A L+DE+ G + S Y +LL YIE V +L + + + Y
Sbjct: 202 GEVVRAKALMDELVCKGFKPSVITYNTLLNGYIEIKDVGGVNEILSLMEKNVVDYNVTTY 261
Query: 562 EALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAK---LLQ 618
L++ A LF EM + I + ++ C + G M + L
Sbjct: 262 TMLIEWYSRSSKIEEAEKLFDEMLKKGIEPDVYIYTSIINWNC----KFGNMKRAFVLFD 317
Query: 619 EVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAI 678
E+ E +R+ + + +I+ CK M+ AE + M+S G N F++++ GY
Sbjct: 318 EMTE-RRLVPNAYTYGALINGACKAGEMKAAEMMVNDMQSKGVDVNRVIFNTLMDGYCKK 376
Query: 679 G 679
G
Sbjct: 377 G 377
Score = 41.2 bits (95), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 57/308 (18%), Positives = 117/308 (37%), Gaps = 25/308 (8%)
Query: 447 LQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGW--- 503
+P+ Y L+ ++E + L EK + +V T + + W
Sbjct: 219 FKPSVITYNTLLNGYIEIKDVGGVNEILSLMEKNVVDY--------NVTTYTMLIEWYSR 270
Query: 504 ---LDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASC 560
+++A L DEM G+ +Y S++ + + L + + +A
Sbjct: 271 SSKIEEAEKLFDEMLKKGIEPDVYIYTSIINWNCKFGNMKRAFVLFDEMTERRLVPNAYT 330
Query: 561 YEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLM--AKLLQ 618
Y AL+ + A + +M +SK F L+ G + G++ A LQ
Sbjct: 331 YGALINGACKAGEMKAAEMMVNDM-QSKGVDVNRVIFNTLMDGYCKK---GMIDEALRLQ 386
Query: 619 EVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAI 678
+ + + + N + FC+ ++A++ L M G PN +F ++ Y
Sbjct: 387 NIMQQKGFEIDAFTCNIIASGFCRSNRREEAKRLLLTMEERGVAPNVVSFSILIDIYCK- 445
Query: 679 GGKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFI 738
+ E L+ M+ + S+ ++ + + + G A +++ M+E +
Sbjct: 446 EQNFAEARRLFKVMEKKGKAPSV----VTYNAFIERYCKKGKMEEAYKLINEMQERGLMP 501
Query: 739 DKYKYRTL 746
D Y Y +L
Sbjct: 502 DTYTYTSL 509
>gi|449456671|ref|XP_004146072.1| PREDICTED: pentatricopeptide repeat-containing protein At3g14580,
mitochondrial-like [Cucumis sativus]
gi|449503658|ref|XP_004162112.1| PREDICTED: pentatricopeptide repeat-containing protein At3g14580,
mitochondrial-like [Cucumis sativus]
Length = 411
Score = 59.3 bits (142), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 72/292 (24%), Positives = 124/292 (42%), Gaps = 21/292 (7%)
Query: 448 QPTEKIYIKLVKAFLEAGKTKELTHFL--IKAEKENLQVSHDDAALGHVITLCISL-GWL 504
+P ++IY +V E ++ + IKAE+ N ++S D HVI + ++ G L
Sbjct: 88 KPNKEIYTLVVSRLAEGRLFDDIEKVMLRIKAER-NFRLS--DEFFYHVIKIYGNVAGRL 144
Query: 505 DQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEAL 564
++A D L +M S + +L + A V + A GI++DA C L
Sbjct: 145 NKAIDTLFDMPNYNCWPSVKTFNFVLNLLVSAKMFDVVHEVYMGAPKLGIEIDACCLNIL 204
Query: 565 LQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQ 624
++ + AL + E + + R + F L+ G +N E G +L ++ E +
Sbjct: 205 VKGLCQSGNLDAALKVLDEFPQQRC-RPNVRTFSTLLHGLCENGELGRALELFCKM-ENE 262
Query: 625 RIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTE 684
+ +N +I KK+ +++A + L RM+ G PNA T+ ++ G GK+ E
Sbjct: 263 GVCPDTITFNILISGLRKKKRIEEAIELLGRMKLKGCYPNAGTYQEVLYGLLDT-GKFIE 321
Query: 685 VTELWGEMKSFASSTSMNFDEELL------------DSVLYTFVRGGFFARA 724
+ M S S ++LL D VL V GF +
Sbjct: 322 ARDCMHRMISEGMDPSFVSYKKLLSGLCKKKLTEDVDWVLKQMVMQGFVPKV 373
>gi|357140125|ref|XP_003571621.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
chloroplastic-like [Brachypodium distachyon]
Length = 814
Score = 59.3 bits (142), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 89/199 (44%), Gaps = 13/199 (6%)
Query: 501 LGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASC 560
LG +++A LL +M + GV+ Y +++ Y +A ++ L + + G++ +A
Sbjct: 560 LGKMEEALHLLGQMKIEGVQPDVVSYGTIIDGYCKAKDIQKANEYLNELMACGLKPNAVI 619
Query: 561 YEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNH---EAGLM--AK 615
Y AL+ + GA+ + M+ I + V C+ H AGL+ AK
Sbjct: 620 YNALIGGYGRNGNISGAIGVLDTMESIGIQPTN-------VTYCSLMHWMCHAGLVDEAK 672
Query: 616 LLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGY 675
+ E I+ GV + +I CK M +A + MRS PN T+ +++ Y
Sbjct: 673 TMFEQSRKNSIEVGVVGYTIMIQGLCKIGKMDEAMNYFEEMRSRSIPPNKITYTTLMYAY 732
Query: 676 AAIGGKYTEVTELWGEMKS 694
G E ++L+ EM S
Sbjct: 733 CK-SGNNEEASKLFDEMVS 750
Score = 55.8 bits (133), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 52/266 (19%), Positives = 121/266 (45%), Gaps = 11/266 (4%)
Query: 447 LQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQ 506
+P ++ ++ A+ + GK +E H L + + E +Q D + G +I + +
Sbjct: 543 FKPDAYMFNSIIHAYCDLGKMEEALHLLGQMKIEGVQ--PDVVSYGTIIDGYCKAKDIQK 600
Query: 507 AHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQ 566
A++ L+E+ G++ ++ +Y +L+ Y +L S GIQ Y +L+
Sbjct: 601 ANEYLNELMACGLKPNAVIYNALIGGYGRNGNISGAIGVLDTMESIGIQPTNVTYCSLMH 660
Query: 567 SKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRI 626
A +F++ +++ I G + ++++G + + +E++ + I
Sbjct: 661 WMCHAGLVDEAKTMFEQSRKNSI-EVGVVGYTIMIQGLCKIGKMDEAMNYFEEMRS-RSI 718
Query: 627 DCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVT 686
+ +++ +CK ++A K M S G +P+ +++++VTG +++V
Sbjct: 719 PPNKITYTTLMYAYCKSGNNEEASKLFDEMVSSGIVPDNVSYNTLVTG-------FSQVD 771
Query: 687 ELWGEMKSFASSTSMNFDEELLDSVL 712
L ++ A +S+ + LD+VL
Sbjct: 772 SLDKAIEKAAEISSIMTQNDCLDNVL 797
Score = 49.3 bits (116), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 73/323 (22%), Positives = 121/323 (37%), Gaps = 70/323 (21%)
Query: 248 AMKPNTNTFNIALAGCLLFETTRKAEQLLDIMPRIGVKADSNLLIIMAHIYERNGRREE- 306
M+ + T+NI + GC +A +L D M R G K D+ + + H Y G+ EE
Sbjct: 507 GMELDNITYNIMIQGCCKDSKIEEALKLRDDMIRKGFKPDAYMFNSIIHAYCDLGKMEEA 566
Query: 307 LRKLQRHIDEAVNLSDIQFRQFYNCLLSCHLKFGDLNSASKMVLEMLQRAKEARNSLAAA 366
L L + E V + Y ++ + K D+ Q+A E N L A
Sbjct: 567 LHLLGQMKIEGVQPDVVS----YGTIIDGYCKAKDI-----------QKANEYLNELMAC 611
Query: 367 MLPFNAVGVNNRTPS-EQNVNCTNSVDLENSGIIENHILSYEDFTKDRKFVALEAEVKRV 425
L NAV N +N N + ++ G+++
Sbjct: 612 GLKPNAVIYNALIGGYGRNGNISGAI-----GVLD------------------------- 641
Query: 426 LQTLLGMLQKQVELITTEHGILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVS 485
T E +QPT Y L+ AG E ++ K +++V
Sbjct: 642 ---------------TMESIGIQPTNVTYCSLMHWMCHAGLVDEAKTMFEQSRKNSIEV- 685
Query: 486 HDDAALGHVIT---LCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREV 542
+G+ I LC +G +D+A + +EM + + Y +L+ AY ++ E
Sbjct: 686 ---GVVGYTIMIQGLC-KIGKMDEAMNYFEEMRSRSIPPNKITYTTLMYAYCKSGNNEEA 741
Query: 543 TALLRDARSAGIQLDASCYEALL 565
+ L + S+GI D Y L+
Sbjct: 742 SKLFDEMVSSGIVPDNVSYNTLV 764
Score = 45.4 bits (106), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 70/336 (20%), Positives = 127/336 (37%), Gaps = 20/336 (5%)
Query: 447 LQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQ 506
+ P Y ++KA + GK + L LQ S ++ G +D+
Sbjct: 225 VTPNGYSYTSMIKALCKVGKVDDGFKILSDLIHAGLQQSAGAVPYNLLMDALCKSGRVDE 284
Query: 507 AHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQ 566
A L M + V S + L+ ++R EV ALLR+ GI + L+
Sbjct: 285 AIRLKGRMEESRVAPSMVTFGILINGLKRSDRFGEVGALLREMEGLGITPNEVICNELID 344
Query: 567 SKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQE-VKEGQR 625
+ A+ LF EM SK +S + ++ + + E ++L+E + G
Sbjct: 345 WHCRKGHFTEAIRLFDEMV-SKEMKSTAVTYNLIARALCKEGEMERAERILEEMLSTGMT 403
Query: 626 IDCGVHDWNNVIHFFCKKR-LMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTE 684
I G+ +N+V+ ++ ++ + + M G PN + T G ++ E
Sbjct: 404 IHSGL--FNSVVAGLLQRTGRLESVVRLISEMVKRGMKPN-DALMTACTKQLCQGRRHQE 460
Query: 685 VTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFIDKYKYR 744
+W +K +N +++++ G A EV+ M M +D Y
Sbjct: 461 AVGIW--LKMLEKGLCINIATS--NALIHGLCEGKNMKGATEVLRTMVNKGMELDNITYN 516
Query: 745 TLFLKYHKTLYKGKTPKFQTEAQLKKREAAL--GFK 778
+ +G + E LK R+ + GFK
Sbjct: 517 IMI--------QGCCKDSKIEEALKLRDDMIRKGFK 544
Score = 41.2 bits (95), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 46/197 (23%), Positives = 88/197 (44%), Gaps = 12/197 (6%)
Query: 502 GWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIE-ANRPREVTALLRDARSAGIQ----L 556
G +++A +L+EM G+ S ++ S++ ++ R V L+ + G++ L
Sbjct: 385 GEMERAERILEEMLSTGMTIHSGLFNSVVAGLLQRTGRLESVVRLISEMVKRGMKPNDAL 444
Query: 557 DASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKL 616
+C + L Q + Q+ A+ ++ +M E + + ++ C + G L
Sbjct: 445 MTACTKQLCQGRRHQE----AVGIWLKMLEKGLCINIATSNALIHGLCEGKNMKGATEVL 500
Query: 617 LQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYA 676
V +G +D +N +I CK +++A K M G P+A F+S++ Y
Sbjct: 501 RTMVNKGMELD--NITYNIMIQGCCKDSKIEEALKLRDDMIRKGFKPDAYMFNSIIHAYC 558
Query: 677 AIGGKYTEVTELWGEMK 693
+ GK E L G+MK
Sbjct: 559 DL-GKMEEALHLLGQMK 574
>gi|297832060|ref|XP_002883912.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297329752|gb|EFH60171.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 623
Score = 59.3 bits (142), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 57/247 (23%), Positives = 96/247 (38%), Gaps = 8/247 (3%)
Query: 447 LQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQ 506
QP + Y ++ G+ E+ E + + + D + +I C + G L+
Sbjct: 292 FQPDLQTYNPILSWMCNEGRASEVLR-----EMKGIGLVPDSVSYNILIRGCSNNGDLET 346
Query: 507 AHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQ 566
A DEM G+ + Y +L+ N+ L+R+ R GI LD+ Y ++
Sbjct: 347 AFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNIVIN 406
Query: 567 SKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRI 626
D A L EM I + ++ C +N + V +G +
Sbjct: 407 GYCQHGDAKKAFALHDEMMTDGIKPTQFTYTSLIYVLCRRNKTREADELFEKVVGKGMKP 466
Query: 627 DCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVT 686
D + N ++ C M A LK M + P+ T++ ++ G GK+ E
Sbjct: 467 DLVM--MNTLMDGHCATGNMDRAFSLLKEMDRMNIDPDDVTYNCLMRGLCG-EGKFEEAR 523
Query: 687 ELWGEMK 693
EL GEMK
Sbjct: 524 ELMGEMK 530
Score = 47.0 bits (110), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 73/178 (41%), Gaps = 9/178 (5%)
Query: 447 LQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQ---VSHDDAALGHVITLCISLGW 503
++PT+ Y L+ KT+E K + ++ V + GH T G
Sbjct: 429 IKPTQFTYTSLIYVLCRRNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCAT-----GN 483
Query: 504 LDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEA 563
+D+A LL EM + Y L++ + E L+ + + GI+ D Y
Sbjct: 484 MDRAFSLLKEMDRMNIDPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNT 543
Query: 564 LLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVK 621
L+ + DT A + EM + + L+KG ++N + L +LL+E+K
Sbjct: 544 LISGYSKKGDTKHAFIVRDEMLSLGFNPT-LLTYNALLKGLSKNQDGELAEELLREMK 600
Score = 46.2 bits (108), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 43/205 (20%), Positives = 90/205 (43%), Gaps = 9/205 (4%)
Query: 477 AEKENLQVSHDDAALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEA 536
A+ +++ + +I + G L +A L M G++ + Y +L++ Y
Sbjct: 215 ADMYRMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMESFGIKPTIVTYNTLVQGYSLR 274
Query: 537 NRPREVTALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKE-SKIPRSGHQ 595
R ++ + +S G Q D Y +L + A + +EMK +P S
Sbjct: 275 GRIEGARMIISEMKSKGFQPDLQTYNPILSWMC---NEGRASEVLREMKGIGLVPDS--V 329
Query: 596 EFEMLVKGCAQNHEAGLMAKLLQE-VKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALK 654
+ +L++GC+ N + E VK+G + + +N +IH + ++ AE ++
Sbjct: 330 SYNILIRGCSNNGDLETAFAYRDEMVKQG--MVPTFYTYNTLIHGLFMENKIEAAEILIR 387
Query: 655 RMRSLGHLPNAQTFHSMVTGYAAIG 679
+R G + ++ T++ ++ GY G
Sbjct: 388 EIREKGIVLDSVTYNIVINGYCQHG 412
>gi|15226583|ref|NP_179165.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75216226|sp|Q9ZQF1.1|PP152_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g15630, mitochondrial; Flags: Precursor
gi|4335729|gb|AAD17407.1| putative salt-inducible protein [Arabidopsis thaliana]
gi|330251331|gb|AEC06425.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 627
Score = 58.9 bits (141), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 58/247 (23%), Positives = 96/247 (38%), Gaps = 8/247 (3%)
Query: 447 LQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQ 506
QP + Y ++ G+ E+ E + + + D + +I C + G L+
Sbjct: 291 FQPDMQTYNPILSWMCNEGRASEVLR-----EMKEIGLVPDSVSYNILIRGCSNNGDLEM 345
Query: 507 AHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQ 566
A DEM G+ + Y +L+ N+ L+R+ R GI LD+ Y L+
Sbjct: 346 AFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNILIN 405
Query: 567 SKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRI 626
D A L EM I + ++ C +N + V +G +
Sbjct: 406 GYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGKGMKP 465
Query: 627 DCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVT 686
D + N ++ C M A LK M + P+ T++ ++ G GK+ E
Sbjct: 466 DLVM--MNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCG-EGKFEEAR 522
Query: 687 ELWGEMK 693
EL GEMK
Sbjct: 523 ELMGEMK 529
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 74/178 (41%), Gaps = 9/178 (5%)
Query: 447 LQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQ---VSHDDAALGHVITLCISLGW 503
+QPT+ Y L+ KT+E K + ++ V + GH ++G
Sbjct: 428 IQPTQFTYTSLIYVLCRKNKTREADELFEKVVGKGMKPDLVMMNTLMDGHC-----AIGN 482
Query: 504 LDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEA 563
+D+A LL EM + + Y L++ + E L+ + + GI+ D Y
Sbjct: 483 MDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNT 542
Query: 564 LLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVK 621
L+ + DT A + EM + L+KG ++N E L +LL+E+K
Sbjct: 543 LISGYSKKGDTKHAFMVRDEMLSLGF-NPTLLTYNALLKGLSKNQEGELAEELLREMK 599
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 43/205 (20%), Positives = 93/205 (45%), Gaps = 9/205 (4%)
Query: 477 AEKENLQVSHDDAALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEA 536
A+ +++ + +I + G L +A L M + G++ + Y +L++ +
Sbjct: 214 ADMYRMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLR 273
Query: 537 NRPREVTALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKE-SKIPRSGHQ 595
R ++ + +S G Q D Y +L + A + +EMKE +P S
Sbjct: 274 GRIEGARLIISEMKSKGFQPDMQTYNPILSWMC---NEGRASEVLREMKEIGLVPDS--V 328
Query: 596 EFEMLVKGCAQNHEAGLMAKLLQE-VKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALK 654
+ +L++GC+ N + + E VK+G + + +N +IH + ++ AE ++
Sbjct: 329 SYNILIRGCSNNGDLEMAFAYRDEMVKQG--MVPTFYTYNTLIHGLFMENKIEAAEILIR 386
Query: 655 RMRSLGHLPNAQTFHSMVTGYAAIG 679
+R G + ++ T++ ++ GY G
Sbjct: 387 EIREKGIVLDSVTYNILINGYCQHG 411
>gi|296081998|emb|CBI21003.3| unnamed protein product [Vitis vinifera]
Length = 837
Score = 58.9 bits (141), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 98/443 (22%), Positives = 170/443 (38%), Gaps = 56/443 (12%)
Query: 251 PNTNTFNIALAGCLLFETTRKAEQLLDIMPRIGVKADSNLLIIMAHIYERNGRREELRKL 310
PN T+++ + GC KA +L M G+ + + Y + EE KL
Sbjct: 358 PNKVTYSVLIEGCCNSGNIEKASELYTQMKLNGIPPSVFNVNSLLRGYLKAPLWEEASKL 417
Query: 311 QRHIDEAVNLSDIQFRQFYNCLLSCHLKFGDLNSASKMVLEMLQRAKEARNSLAAAMLPF 370
DEAV+ YN ++S K G ++ A ++ M+ + M+P
Sbjct: 418 ---FDEAVDCGVANIFT-YNIMMSWLCKGGKMDEACSLLDNMVNQG----------MVP- 462
Query: 371 NAVGVNNRTPS---EQNVNCTNSV-------DLENSGIIENHILSYEDFTKDRKFVALEA 420
N V N+ + N++ +SV DL+ ++ IL +F K
Sbjct: 463 NVVSYNDMILGHCRKGNMDMASSVFSDMLARDLK-PNVVTYSILIDGNFKK--------G 513
Query: 421 EVKRVLQTLLGMLQKQVELITTEHGILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKE 480
+ ++ L ML + PT+ + ++ + G+ E L +E
Sbjct: 514 DSEKALDLFDQMLSLNI----------APTDFTFNTIINGLCKVGQMSEARDKLKNFLEE 563
Query: 481 NLQVSHDDAALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPR 540
S ++ I G +D A + EM GV + Y SL+ + ++NR
Sbjct: 564 GFIPSC--MTYNSIVDGFIKEGNIDSALAVYREMCEFGVSPNVVTYTSLINGFCKSNRID 621
Query: 541 EVTALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEML 600
+ R G++LD + Y AL+ ++D A LF E+ E + + +
Sbjct: 622 LALKTRDEMREKGLELDVTAYSALIDGFCKRRDMESAQDLFFELLEVGL-SPNRIVYNSM 680
Query: 601 VKGCA--QNHEAGLM--AKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRM 656
+ G N EA L+ K++ + RI C + + +I K+ + A M
Sbjct: 681 ISGFRDLNNMEAALVWYKKMIND-----RIPCDLGTYTTLIDGLLKEGRLVFASDLYMEM 735
Query: 657 RSLGHLPNAQTFHSMVTGYAAIG 679
S G +P+ TFH +V G G
Sbjct: 736 LSKGIVPDIITFHVLVNGLCNKG 758
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 82/197 (41%), Gaps = 13/197 (6%)
Query: 488 DAALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLR 547
+A VI C++ G + +A L +EM G + V SL+K Y L
Sbjct: 290 EATFTSVIVACVAQGNMVEALRLKEEMINCGKPMNLVVATSLMKGYCAQGNLDSALNLFN 349
Query: 548 DARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQN 607
G+ + Y L++ + A L+ +MK + IP S +L
Sbjct: 350 KITEDGLFPNKVTYSVLIEGCCNSGNIEKASELYTQMKLNGIPPSVFNVNSLL------- 402
Query: 608 HEAGLMAKLLQEVKE--GQRIDCGVHD---WNNVIHFFCKKRLMQDAEKALKRMRSLGHL 662
L A L +E + + +DCGV + +N ++ + CK M +A L M + G +
Sbjct: 403 -RGYLKAPLWEEASKLFDEAVDCGVANIFTYNIMMSWLCKGGKMDEACSLLDNMVNQGMV 461
Query: 663 PNAQTFHSMVTGYAAIG 679
PN +++ M+ G+ G
Sbjct: 462 PNVVSYNDMILGHCRKG 478
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 46/204 (22%), Positives = 93/204 (45%), Gaps = 11/204 (5%)
Query: 494 VITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAG 553
++T + + + DL ++M L G+ +++A ++ R E R+ + G
Sbjct: 191 LLTALVRRNMIGELRDLYNKMVLRGIYGDHFTVHVMVRACLKEGRVEEAEEYFRETKERG 250
Query: 554 IQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLM 613
++LDA Y ++Q+ + ++ L L +EMKE S ++V AQ G M
Sbjct: 251 VKLDAGAYSIIIQAVCKKPNSNLGLELLEEMKERGWVPSEATFTSVIVACVAQ----GNM 306
Query: 614 AKLLQEVKEGQRIDCG----VHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFH 669
+ L+ +KE + I+CG + +++ +C + + A ++ G PN T+
Sbjct: 307 VEALR-LKE-EMINCGKPMNLVVATSLMKGYCAQGNLDSALNLFNKITEDGLFPNKVTYS 364
Query: 670 SMVTGYAAIGGKYTEVTELWGEMK 693
++ G G + +EL+ +MK
Sbjct: 365 VLIEG-CCNSGNIEKASELYTQMK 387
Score = 43.9 bits (102), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 96/233 (41%), Gaps = 27/233 (11%)
Query: 525 VYASLLKAYIEANRPREVTALLRDARSAGIQLDA---SCYEALLQSKIVQKDTPGALH-L 580
V+ LL AYI ANR D +A I D Y +L + +V+++ G L L
Sbjct: 152 VFNYLLNAYIRANRIENAI----DCFNAMICQDVIPWVPYMNILLTALVRRNMIGELRDL 207
Query: 581 FKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKE-GQRIDCGVHDWNNVIHF 639
+ +M I H ++V+ C + + +E KE G ++D G + +I
Sbjct: 208 YNKMVLRGI-YGDHFTVHVMVRACLKEGRVEEAEEYFRETKERGVKLDAGAYSI--IIQA 264
Query: 640 FCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEMKSFASST 699
CKK + L+ M+ G +P+ TF S++ A G E L EM +
Sbjct: 265 VCKKPNSNLGLELLEEMKERGWVPSEATFTSVIVACVA-QGNMVEALRLKEEMINCGKPM 323
Query: 700 SMNFDEELLDSVLYTFVRGGFFARANEVVAM-----MEEGKMFIDKYKYRTLF 747
++ V+ T + G+ A+ N A+ + E +F +K Y L
Sbjct: 324 NL---------VVATSLMKGYCAQGNLDSALNLFNKITEDGLFPNKVTYSVLI 367
>gi|242067062|ref|XP_002454820.1| hypothetical protein SORBIDRAFT_04g038070 [Sorghum bicolor]
gi|241934651|gb|EES07796.1| hypothetical protein SORBIDRAFT_04g038070 [Sorghum bicolor]
Length = 600
Score = 58.9 bits (141), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 60/246 (24%), Positives = 102/246 (41%), Gaps = 42/246 (17%)
Query: 507 AHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQ 566
A + DEM AG+ S+ VY ++L ++A AL+ +AG+ LD Y ++
Sbjct: 168 ARRVFDEMARAGLAVSTHVYNAMLHVCLKAGDAARAEALVTRMDAAGVPLDRFSYNTVI- 226
Query: 567 SKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRI 626
AL+ K M+ +E + C ++ + KEG R
Sbjct: 227 ----------ALYCKKGMR-----------YEAM---CVRD----------RMDKEGIRA 252
Query: 627 DCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVT 686
D WN++IH CK +++A + M + P+ T+ +++ GY G E
Sbjct: 253 D--TVTWNSLIHGLCKYGRVKEAAQLFTEMAAAQATPDNVTYTTLIDGYCR-AGNIEEAV 309
Query: 687 ELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFIDKYKYRTL 746
+L GEM+ +T M +++L G N+++ M+E K+ D TL
Sbjct: 310 KLRGEME----ATGMLPGVATYNAILRKLCEDGKMKEVNQLLNEMDERKVQADHVTCNTL 365
Query: 747 FLKYHK 752
Y K
Sbjct: 366 INAYCK 371
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 57/263 (21%), Positives = 108/263 (41%), Gaps = 8/263 (3%)
Query: 435 KQVELITTEHGILQ--PTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALG 492
K+ + TE Q P Y L+ + AG +E ++ E E + A
Sbjct: 271 KEAAQLFTEMAAAQATPDNVTYTTLIDGYCRAGNIEEAVK--LRGEMEATGMLPGVATYN 328
Query: 493 HVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSA 552
++ G + + + LL+EM V+A +L+ AY + + + +
Sbjct: 329 AILRKLCEDGKMKEVNQLLNEMDERKVQADHVTCNTLINAYCKRGHMTSACKVKKKMMES 388
Query: 553 GIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKG-CAQNHEAG 611
G+QL+ Y+AL+ K+ A F +M ++ + F LV G C +N+
Sbjct: 389 GLQLNQFTYKALIHGFCKAKELDEAKEAFFQMVDAGFS-PNYSVFSWLVDGFCKKNNADA 447
Query: 612 LMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSM 671
++ + +K G D V + ++I C+K L+ A+K +M+S G + ++ + ++
Sbjct: 448 VLLIPDELMKRGLPPDKAV--YRSLIRRLCRKGLVDQAQKVFDQMQSKGLVGDSLVYATL 505
Query: 672 VTGYAAIGGKYTEVTELWGEMKS 694
Y G L G K+
Sbjct: 506 AYTYLTEGKPVAASNTLDGMAKN 528
Score = 46.2 bits (108), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 47/229 (20%), Positives = 97/229 (42%), Gaps = 4/229 (1%)
Query: 447 LQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQ 506
L + +Y ++ L+AG + + + + + D + VI L G +
Sbjct: 180 LAVSTHVYNAMLHVCLKAGDAARAEALVTRMDAAGVPL--DRFSYNTVIALYCKKGMRYE 237
Query: 507 AHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQ 566
A + D M G+RA + + SL+ + R +E L + +A D Y L+
Sbjct: 238 AMCVRDRMDKEGIRADTVTWNSLIHGLCKYGRVKEAAQLFTEMAAAQATPDNVTYTTLID 297
Query: 567 SKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRI 626
+ A+ L EM+ + + G + +++ ++ + + +LL E+ E +++
Sbjct: 298 GYCRAGNIEEAVKLRGEMEATGM-LPGVATYNAILRKLCEDGKMKEVNQLLNEMDE-RKV 355
Query: 627 DCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGY 675
N +I+ +CK+ M A K K+M G N T+ +++ G+
Sbjct: 356 QADHVTCNTLINAYCKRGHMTSACKVKKKMMESGLQLNQFTYKALIHGF 404
>gi|225434273|ref|XP_002276453.1| PREDICTED: pentatricopeptide repeat-containing protein At5g65560
[Vitis vinifera]
gi|296084392|emb|CBI24780.3| unnamed protein product [Vitis vinifera]
Length = 890
Score = 58.9 bits (141), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 97/231 (41%), Gaps = 10/231 (4%)
Query: 447 LQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQ---VSHDDAALGHVITLCISLGW 503
+ P + +V + + G E + K + L ++ LGH C + G
Sbjct: 190 ISPNIYTFNAMVNGYCKIGNVVEAELYASKIVQAGLHPDTFTYTSLILGH----CRNKG- 244
Query: 504 LDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEA 563
+D A+++ M G + + Y +L+ EA R E L D Y
Sbjct: 245 VDNAYEVFLIMPQKGCQRNEVSYTNLIHGLCEAGRINEALKLFADMTEDNCCPTVRTYTV 304
Query: 564 LLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEG 623
L+ + AL+LF EMKE + H + +L+ G + ++ K+L E+ E
Sbjct: 305 LIYALSGSGRKVEALNLFNEMKEKGCEPNVHT-YTVLIDGLCKENKMDEARKMLSEMSEK 363
Query: 624 QRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTG 674
I V +N +I +CK+ ++ DA + L M S PN +T++ ++ G
Sbjct: 364 GLIP-SVVTYNALIDGYCKEGMIDDAFEILDLMESNSCGPNTRTYNELICG 413
Score = 43.1 bits (100), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 42/188 (22%), Positives = 82/188 (43%), Gaps = 11/188 (5%)
Query: 496 TLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQ 555
TLC G +++A L D + GV+A+ +Y +L+ Y + + +LL +
Sbjct: 483 TLCKE-GRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACL 541
Query: 556 LDASCYEALLQSKIVQKDTPGALHLFKEMKESKI-PRSGHQEF---EMLVKGCAQNHEAG 611
++ Y L++ +K A L +M + P EML G A +H
Sbjct: 542 PNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDG-AFDHALK 600
Query: 612 LMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSM 671
+ + V G + D V + +H + + ++++ + + +M G LP+ T+ +
Sbjct: 601 VFNHM---VSLGYQPD--VCTYTAFLHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYTVL 655
Query: 672 VTGYAAIG 679
+ GYA +G
Sbjct: 656 IDGYARLG 663
Score = 41.6 bits (96), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 59/285 (20%), Positives = 104/285 (36%), Gaps = 40/285 (14%)
Query: 502 GWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCY 561
G +D A ++LD M ++ Y L+ + + + ALL + Y
Sbjct: 383 GMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLERKLSPSLITY 442
Query: 562 EALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQN--HEAGLMAKLLQE 619
+L+ + D A L M E+ + + C + EAG + ++
Sbjct: 443 NSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKA 502
Query: 620 --VKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYA- 676
VK + I + +I +CK + A L+RM + LPN+ T++ ++ G
Sbjct: 503 KGVKANEVI------YTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCK 556
Query: 677 ---------------AIGGKYTEVTE--LWGEM----------KSFASSTSMNFDEELL- 708
+G K T VT L GEM K F S+ + ++
Sbjct: 557 EKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQPDVCT 616
Query: 709 -DSVLYTFVRGGFFARANEVVAMMEEGKMFIDKYKYRTLFLKYHK 752
+ L+ + G ++V+A M E + D Y L Y +
Sbjct: 617 YTAFLHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYTVLIDGYAR 661
>gi|302806475|ref|XP_002984987.1| hypothetical protein SELMODRAFT_20977 [Selaginella moellendorffii]
gi|300147197|gb|EFJ13862.1| hypothetical protein SELMODRAFT_20977 [Selaginella moellendorffii]
Length = 471
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 59/253 (23%), Positives = 99/253 (39%), Gaps = 41/253 (16%)
Query: 449 PTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQAH 508
P +Y ++ AF ++GK E L + K+ + S D VI LG + +A
Sbjct: 230 PDVVVYSSIIHAFCKSGKLLEAQKTLQEMRKQ--RKSPDVVTYNTVIDGLCKLGKIAEAQ 287
Query: 509 DLLDEMHLAG-VRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQS 567
+LD+M +G V Y++++ +++ E LL AG D Y ++
Sbjct: 288 VILDQMQESGDVLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDG 347
Query: 568 KIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRID 627
A +L + MK + GCA N
Sbjct: 348 LCKCGRLEEAEYLLQGMKRA---------------GCAPN-------------------- 372
Query: 628 CGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTE 687
V + +I CK R + +AE+ ++ MR+ G PN T+++MV G + G+ E +
Sbjct: 373 --VVTYTTLISGLCKARKVDEAERVMEEMRNAGCPPNLVTYNTMVNGL-CVSGRIKEAQQ 429
Query: 688 LWGEMKSFASSTS 700
L MK + S
Sbjct: 430 LVQRMKDGRAECS 442
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/219 (21%), Positives = 86/219 (39%), Gaps = 46/219 (21%)
Query: 502 GWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCY 561
G +D A LL M G+R + Y++L+ ++ + E +L + +++G+ DA Y
Sbjct: 141 GNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLEAKEVLEEMKASGVTPDAFTY 200
Query: 562 EALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVK 621
AL+ K KI + M GC +
Sbjct: 201 SALIHGLC---------------KADKIEEAEQMLRRMAGSGCTPD-------------- 231
Query: 622 EGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGK 681
V ++++IH FCK + +A+K L+ MR P+ T+++++ G + GK
Sbjct: 232 --------VVVYSSIIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKL-GK 282
Query: 682 YTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGF 720
E + +M+ + L D V Y+ V G
Sbjct: 283 IAEAQVILDQMQESG--------DVLPDVVTYSTVINGL 313
Score = 45.1 bits (105), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 53/232 (22%), Positives = 95/232 (40%), Gaps = 16/232 (6%)
Query: 545 LLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGC 604
LL + +SAG DA + ++ + D GA+ + M + L+
Sbjct: 12 LLEEMKSAGFAPDAFTHTPIITAMANAGDLDGAMDHLRSMGCD----PNVVTYTALIAAF 67
Query: 605 AQNHEAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPN 664
A+ + KLL+E++E + + +N ++ CK ++ A+ +K+M G PN
Sbjct: 68 ARAKKLEEAMKLLEEMRE-RGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKMIEGGFAPN 126
Query: 665 AQTFHSMVTGYAAIGGKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARA 724
TF+S+V G+ G + +L G M + ++ L+D + F A
Sbjct: 127 VMTFNSLVDGFCK-RGNVDDARKLLGIMVAKGMRPNVVTYSALIDG----LCKSQKFLEA 181
Query: 725 NEVVAMMEEGKMFIDKYKYRTLFLKYHKTLYKGKTPKFQTEAQLKKREAALG 776
EV+ M+ + D + Y L H K K + Q+ +R A G
Sbjct: 182 KEVLEEMKASGVTPDAFTYSALI---HGLC---KADKIEEAEQMLRRMAGSG 227
>gi|359477372|ref|XP_002280003.2| PREDICTED: pentatricopeptide repeat-containing protein At3g23020
[Vitis vinifera]
Length = 881
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 100/465 (21%), Positives = 188/465 (40%), Gaps = 42/465 (9%)
Query: 251 PNTNTFNIALAGCLLFETTRKAEQLLDIMPRIGVKADSNLLIIMAHIYERNGRREELRKL 310
PNT TFN + C +A L+ M + D+ I+ ++ ++ +
Sbjct: 358 PNTVTFNTMIHICGNHGQLEEAASLMQKMEELRCPPDTRTYNILISLHAKHNNIDRAASY 417
Query: 311 QRHIDEAVNLSD-IQFRQFYNCLLSCHLKFGDLNSASKMVLEMLQRAKE---------AR 360
+ + EA D + +R HL + A +V EM +R E R
Sbjct: 418 FKKMKEARLEPDLVSYRTLLYAFSIRHL----VGEAEILVSEMDERGLEIDEFTQSALTR 473
Query: 361 NSLAAAMLP-----FNAVGVNNRTPSEQNVNCTNSVDLENSGIIENHILSYED----FTK 411
+ A ML F + SE S +++ G HIL E +
Sbjct: 474 MYIEAGMLKKSWLWFRRFHLEGNMSSE-----CYSANIDAYGE-RGHILEAEKAFLCCKE 527
Query: 412 DRKFVALEAEVKRVLQTLLGMLQKQVELITT--EHGILQPTEKIYIKLVKAFLEAGKTKE 469
RK LE V + +K +LI + HG+L P + Y L++ A +
Sbjct: 528 SRKLSVLEFNVMIKAYGISNRYEKACQLIDSMENHGVL-PDKFSYNSLIQILASADLPHK 586
Query: 470 LTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASL 529
+L+K ++ Q+ D VI+ I LG L+ A L EM V+ VY L
Sbjct: 587 AKFYLMKMQE--TQLVSDCIPYCAVISSFIKLGQLEMAEGLFKEMIGYNVQPDVVVYGIL 644
Query: 530 LKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKI 589
+ A+ + RE + R+AG+ ++A Y +L++ A +K ++ S++
Sbjct: 645 INAFADVGNVREAVNYVNALRNAGLPMNAVIYNSLIKLYTKVGYLEEAQEAYKMLQASEV 704
Query: 590 PRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRL--MQ 647
+ M+ + M K +E+ E + ++++ + KR+ ++
Sbjct: 705 GPDVYSSNCMI-----DLYSERSMVKQAEEIFESLKRKGDANEFSFAMMLCMYKRIGKLK 759
Query: 648 DAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEM 692
+A + +++MR LG + + ++++ V G+ A+ G++ + + EM
Sbjct: 760 EAFQIVQKMRELGLVTDLLSYNN-VLGFYAMDGRFKDAVGTFKEM 803
>gi|357455187|ref|XP_003597874.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|124359582|gb|ABD28711.2| Tetratricopeptide-like helical [Medicago truncatula]
gi|355486922|gb|AES68125.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 822
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 110/466 (23%), Positives = 183/466 (39%), Gaps = 60/466 (12%)
Query: 302 GRREELRKLQRHIDEAVNLSDIQFRQFYNCLLSCHLKFGDLNSASKMVLEM-LQRAKEAR 360
G+ EE RKL ID+ + FYN ++ + K GDL A+++ E+ L+
Sbjct: 219 GKVEEGRKL---IDDRWGNGCVPNVVFYNVIIDGYCKKGDLKRATRVFEELKLKGFLPTL 275
Query: 361 NSLAAAMLPFNAVG---VNNRTPSEQNVNCTN-SVDLENSGIIENHILSYEDFTKDRKFV 416
+ A + F G V ++ +E NV N +V + NS
Sbjct: 276 ETYGALIDGFCKAGKFQVVDQLLNEMNVMGLNVNVKVFNS-------------------- 315
Query: 417 ALEAEVKRVLQTLLGMLQKQVELI--TTEHGILQPTEKIYIKLVKAFLEAGKTKELTHFL 474
++A+ K G++ K E++ TE G +P Y L+ G+ KE FL
Sbjct: 316 IIDAKYK------YGLVDKAAEMMRMMTEMGC-EPDITTYNILINFSCSGGRIKEAEEFL 368
Query: 475 IKA-EKENLQVSHDDAALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAY 533
+A E+ L L H G A D+L ++ G + Y + +
Sbjct: 369 ERAKERTLLPNKFSYTPLMHAYC---KQGDYVMASDMLFKIAETGDKPDLVSYGAFIHGS 425
Query: 534 IEANRPREVTALLRD-ARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRS 592
+ A +V ++R+ G+ DA Y L+ + P A L EM + +
Sbjct: 426 V-AGGEIDVALMVREKMMEKGVFPDAQIYNVLMSGLCKKGRFPAAKLLLSEMLDLNLQPD 484
Query: 593 GHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKA 652
+ + LV G +N+E +L EV + ID GV +N +I CK M DA
Sbjct: 485 AYM-YATLVDGFIRNNELDKATELF-EVVMSKGIDPGVVGYNVMIKGLCKCGKMTDAVSY 542
Query: 653 LKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEMKSFASSTSMNFDEELLDSVL 712
+ +M+ H P+ T +++ GY + +L +K F + + V
Sbjct: 543 VNKMKIANHAPDEYTHSTVIDGYV-------KQHDLDSALKMFGQMMKQKYKPNV---VA 592
Query: 713 YTFVRGGF-----FARANEVVAMMEEGKMFIDKYKYRTLFLKYHKT 753
YT + GF +RA +V M+ + + Y L + KT
Sbjct: 593 YTSLINGFCKIADMSRAEKVFRAMQSFNLEPNVVTYTILIGGFSKT 638
Score = 47.8 bits (112), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 38/170 (22%), Positives = 82/170 (48%), Gaps = 21/170 (12%)
Query: 576 GALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEV---KEGQRI------ 626
G + + E+ + + R G +++V N+ ++ K L +V +EG+++
Sbjct: 178 GKVDVACELYDKMLERGGDHGLDLVV----DNYSIVIVVKGLCDVGKVEEGRKLIDDRWG 233
Query: 627 -DC--GVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYT 683
C V +N +I +CKK ++ A + + ++ G LP +T+ +++ G+ GK+
Sbjct: 234 NGCVPNVVFYNVIIDGYCKKGDLKRATRVFEELKLKGFLPTLETYGALIDGFCK-AGKFQ 292
Query: 684 EVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEE 733
V +L EM +N + ++ +S++ + G +A E++ MM E
Sbjct: 293 VVDQLLNEMNVMG----LNVNVKVFNSIIDAKYKYGLVDKAAEMMRMMTE 338
Score = 40.0 bits (92), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 45/214 (21%), Positives = 76/214 (35%), Gaps = 41/214 (19%)
Query: 502 GWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCY 561
G A LL EM ++ + +YA+L+ +I N + T L S GI Y
Sbjct: 464 GRFPAAKLLLSEMLDLNLQPDAYMYATLVDGFIRNNELDKATELFEVVMSKGIDPGVVGY 523
Query: 562 EALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEF--EMLVKGCAQNHEAGLMAKLLQE 619
+++ A+ +MK I E+ ++ G + H+ K+ +
Sbjct: 524 NVMIKGLCKCGKMTDAVSYVNKMK---IANHAPDEYTHSTVIDGYVKQHDLDSALKMFGQ 580
Query: 620 VKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLG------------------- 660
+ + Q+ V + ++I+ FCK M AEK + M+S
Sbjct: 581 MMK-QKYKPNVVAYTSLINGFCKIADMSRAEKVFRAMQSFNLEPNVVTYTILIGGFSKTG 639
Query: 661 ----------------HLPNAQTFHSMVTGYAAI 678
LPN TFH ++ G I
Sbjct: 640 KPEKAASFFELMLMNNCLPNDTTFHYLINGLTNI 673
>gi|242069877|ref|XP_002450215.1| hypothetical protein SORBIDRAFT_05g002040 [Sorghum bicolor]
gi|241936058|gb|EES09203.1| hypothetical protein SORBIDRAFT_05g002040 [Sorghum bicolor]
Length = 862
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 125/623 (20%), Positives = 237/623 (38%), Gaps = 73/623 (11%)
Query: 102 NEHRYGDAWKLYEQHMQMDG----FPRKTLVNKILTSFVESLDSKWLEKAYGLVEQAFEE 157
NE R +A +L M DG P N I+ ++ + +++A G+++ ++
Sbjct: 173 NEKRVEEALELLHT-MAEDGGGNCTPNVVTYNTIIDGLCKA---QAVDRAEGVLQHMIDK 228
Query: 158 GKQILLEKEPLIYLSL--GLSKCGLPVPASTILRKLVATEQYPPVTAWSAILAHMSLTAP 215
G ++ + + Y ++ GL K A +L+ ++ P V ++ I+ L
Sbjct: 229 GVKL----DVVTYSTIIDGLCKAQAVDRAEGVLQHMIDKGVKPDVVTYNTIID--GLCKA 282
Query: 216 GAYLAAELILEIGYLFQDGRVDPRKKCNAPLIAMKPNTNTFNIALAGCLLFETTRKAEQL 275
A AE +L+ ++ G +KP+ T+N + G + +A+ +
Sbjct: 283 QAVDRAEGVLQ--HMIDKG--------------VKPDVVTYNTIIDGLCKAQAVDRADGV 326
Query: 276 LDIMPRIGVKADSNLLIIMAHIYERNGR-REELRKLQRHIDEAVNLSDIQFRQFYNCLLS 334
L M VK D + H Y G +E +R+L+ ++ + Y+ LL
Sbjct: 327 LQHMIDKDVKPDIQTYNCLIHGYLSTGEWKEVVRRLEEMYARGLDPDVVT----YSLLLD 382
Query: 335 CHLKFGDLNSASKMVLEMLQRAKE--------------ARNSLAAAMLPFNAVGVNNRTP 380
K G A K+ M+++ + AR ++A + + N +P
Sbjct: 383 YLCKNGKCTEARKIFYCMIRKGIKPNVTIYGILLHGYAARGAIADLTDLLDLMVANGISP 442
Query: 381 SEQNVNCTNSVDLENSGIIEN-HILS-------YEDFTKDRKFVALEAEVKRVLQTLLGM 432
+ N + + I E HI S D + ++ RV +L
Sbjct: 443 NNYIFNIVLCAYAKKAMIDEAMHIFSRMSQHGLSPDVVTYGILIDALCKLGRVDDAVLKF 502
Query: 433 LQKQVELITTEHGILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALG 492
Q + +T P ++ LV + ++ E + V +
Sbjct: 503 NQMINDGVT-------PNSVVFNSLVYGLCTVDRWEKAEELFF--EMWDQGVRPNVVFFN 553
Query: 493 HVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSA 552
++ + G + A L+D M GVR + Y +L+ + A R E LL S
Sbjct: 554 TIMCNLCNEGQVMVAQRLIDSMERVGVRPNVISYNTLIGGHCLAGRTDEAAQLLDVMVSV 613
Query: 553 GIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGL 612
G++ D Y+ LL+ A LF+EM + G + +++G
Sbjct: 614 GLKPDLISYDTLLRGYCKTGRIDNAYCLFREMLRKGVT-PGAVTYSTILQGLFHTRRFSE 672
Query: 613 MAKL-LQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSM 671
+L L +K GQ+ D ++ +N +++ CK + +A K + + S PN TF M
Sbjct: 673 AKELYLNMIKSGQQWD--IYTYNIILNGLCKTNCVDEAFKIFQSLCSKDLRPNIITFTIM 730
Query: 672 VTGYAAIGGKYTEVTELWGEMKS 694
+ GG+ + +L+ + S
Sbjct: 731 IDVLFK-GGRKKDAMDLFASIPS 752
Score = 45.1 bits (105), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 53/270 (19%), Positives = 106/270 (39%), Gaps = 20/270 (7%)
Query: 504 LDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEA 563
+D+A +L M GV+ Y +++ +A +L+ G++ D Y
Sbjct: 250 VDRAEGVLQHMIDKGVKPDVVTYNTIIDGLCKAQAVDRAEGVLQHMIDKGVKPDVVTYNT 309
Query: 564 LLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEG 623
++ + A + + M + + + Q + L+ G E + + L+E+
Sbjct: 310 IIDGLCKAQAVDRADGVLQHMIDKDV-KPDIQTYNCLIHGYLSTGEWKEVVRRLEEMY-A 367
Query: 624 QRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYT 683
+ +D V ++ ++ + CK +A K M G PN + ++ GYAA G
Sbjct: 368 RGLDPDVVTYSLLLDYLCKNGKCTEARKIFYCMIRKGIKPNVTIYGILLHGYAA-RGAIA 426
Query: 684 EVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFIDKYKY 743
++T+L M A+ S N + + VL + + A + + M + + D Y
Sbjct: 427 DLTDLLDLM--VANGISPN--NYIFNIVLCAYAKKAMIDEAMHIFSRMSQHGLSPDVVTY 482
Query: 744 RTLF-------------LKYHKTLYKGKTP 760
L LK+++ + G TP
Sbjct: 483 GILIDALCKLGRVDDAVLKFNQMINDGVTP 512
>gi|297737146|emb|CBI26347.3| unnamed protein product [Vitis vinifera]
Length = 862
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 100/465 (21%), Positives = 188/465 (40%), Gaps = 42/465 (9%)
Query: 251 PNTNTFNIALAGCLLFETTRKAEQLLDIMPRIGVKADSNLLIIMAHIYERNGRREELRKL 310
PNT TFN + C +A L+ M + D+ I+ ++ ++ +
Sbjct: 339 PNTVTFNTMIHICGNHGQLEEAASLMQKMEELRCPPDTRTYNILISLHAKHNNIDRAASY 398
Query: 311 QRHIDEAVNLSD-IQFRQFYNCLLSCHLKFGDLNSASKMVLEMLQRAKE---------AR 360
+ + EA D + +R HL + A +V EM +R E R
Sbjct: 399 FKKMKEARLEPDLVSYRTLLYAFSIRHL----VGEAEILVSEMDERGLEIDEFTQSALTR 454
Query: 361 NSLAAAMLP-----FNAVGVNNRTPSEQNVNCTNSVDLENSGIIENHILSYED----FTK 411
+ A ML F + SE S +++ G HIL E +
Sbjct: 455 MYIEAGMLKKSWLWFRRFHLEGNMSSE-----CYSANIDAYGE-RGHILEAEKAFLCCKE 508
Query: 412 DRKFVALEAEVKRVLQTLLGMLQKQVELITT--EHGILQPTEKIYIKLVKAFLEAGKTKE 469
RK LE V + +K +LI + HG+L P + Y L++ A +
Sbjct: 509 SRKLSVLEFNVMIKAYGISNRYEKACQLIDSMENHGVL-PDKFSYNSLIQILASADLPHK 567
Query: 470 LTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASL 529
+L+K ++ Q+ D VI+ I LG L+ A L EM V+ VY L
Sbjct: 568 AKFYLMKMQE--TQLVSDCIPYCAVISSFIKLGQLEMAEGLFKEMIGYNVQPDVVVYGIL 625
Query: 530 LKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKI 589
+ A+ + RE + R+AG+ ++A Y +L++ A +K ++ S++
Sbjct: 626 INAFADVGNVREAVNYVNALRNAGLPMNAVIYNSLIKLYTKVGYLEEAQEAYKMLQASEV 685
Query: 590 PRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRL--MQ 647
+ M+ + M K +E+ E + ++++ + KR+ ++
Sbjct: 686 GPDVYSSNCMI-----DLYSERSMVKQAEEIFESLKRKGDANEFSFAMMLCMYKRIGKLK 740
Query: 648 DAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEM 692
+A + +++MR LG + + ++++ V G+ A+ G++ + + EM
Sbjct: 741 EAFQIVQKMRELGLVTDLLSYNN-VLGFYAMDGRFKDAVGTFKEM 784
Score = 40.4 bits (93), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 43/219 (19%), Positives = 91/219 (41%), Gaps = 9/219 (4%)
Query: 447 LQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQ 506
+ P Y L+ + + G T+E H+L + K+ ++ D+ +G V+ G +
Sbjct: 227 ITPVNSTYGTLIDVYSKGGLTEEALHWLDRMNKQGME--PDEVTMGVVVQTYKKAGEFKK 284
Query: 507 AHDLLDEMHLAG-----VRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCY 561
A L V SS Y +L+ Y +A + RE + GI + +
Sbjct: 285 AEQFFKNWSLESASQPHVCLSSYTYNTLIDTYGKAGQLREASDTFAWMLREGIIPNTVTF 344
Query: 562 EALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVK 621
++ A L ++M+E + P + + +L+ A+++ A +++K
Sbjct: 345 NTMIHICGNHGQLEEAASLMQKMEELRCP-PDTRTYNILISLHAKHNNIDRAASYFKKMK 403
Query: 622 EGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLG 660
E R++ + + +++ F + L+ +AE + M G
Sbjct: 404 EA-RLEPDLVSYRTLLYAFSIRHLVGEAEILVSEMDERG 441
>gi|413952239|gb|AFW84888.1| hypothetical protein ZEAMMB73_407218 [Zea mays]
Length = 668
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 65/309 (21%), Positives = 120/309 (38%), Gaps = 27/309 (8%)
Query: 447 LQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVIT-------LCI 499
+ P Y L++ + G+ + L + Q +V+T +C
Sbjct: 138 VAPDAYTYTPLIRVLCDRGRVADALSLLDDMLRRGCQ--------PNVVTYTVLLEAMCK 189
Query: 500 SLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDAS 559
+ G+ +QA +LDEM G + Y ++ R + LL S G Q D
Sbjct: 190 NSGF-EQAMAVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDARDLLNRLFSYGCQPDTV 248
Query: 560 CYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQE 619
Y LL+ K LF EM E F+ML++ + G++ + +Q
Sbjct: 249 SYTTLLKGLCASKRWDDVEELFAEMMEKNC-MPNEVTFDMLIRFFCR---GGMVERAIQV 304
Query: 620 VKEGQRIDCGVHD--WNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAA 677
+++ +C + N VI+ CK+ + DA K L M S G P+ ++ +++ G
Sbjct: 305 LQQMTEHECATNTTLCNIVINSICKQGRVDDAFKFLNNMGSYGCNPDTISYTTVLKGLCR 364
Query: 678 IGGKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMF 737
++ + EL EM + +E ++ + + G +A ++ M+E
Sbjct: 365 -AERWNDAKELLKEM----VRNNCPPNEVTFNTFICILCQKGLIEQAIMLIEQMQEHGCT 419
Query: 738 IDKYKYRTL 746
+ Y L
Sbjct: 420 VGVVTYNAL 428
Score = 53.1 bits (126), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 112/546 (20%), Positives = 188/546 (34%), Gaps = 103/546 (18%)
Query: 181 PVPASTILRKLVATEQYPPVTAWSAILAHMSLTAPGAYLAAELILEIGYLFQDGRV-DPR 239
P PAS LR+L+A E + A AP YL +LI L + GR D
Sbjct: 39 PNPASARLRRLIAREDLAGAARLVELSASRDGEAPDVYLCTKLIRN---LCRRGRTSDAA 95
Query: 240 KKCNAPLIAMKP-NTNTFNIALAGCLLFETTRKAEQLLDIMPRIGVKADSNLLIIMAHIY 298
+ A + P + +N +AG + A +L+ MP V D+ + +
Sbjct: 96 RVLRAAEGSGSPVDVFAYNTLVAGYCRYGHLDAARRLIGSMP---VAPDAYTYTPLIRVL 152
Query: 299 ERNGRREELRKLQRHIDEAVNLSDIQFRQ-------FYNCLLSCHLKFGDLNSASKMVLE 351
GR + +A++L D R+ Y LL K A ++ E
Sbjct: 153 CDRGR----------VADALSLLDDMLRRGCQPNVVTYTVLLEAMCKNSGFEQAMAVLDE 202
Query: 352 MLQRAKEARNSLAAAMLPFNAVGVNNRTPSEQNVNCTNSVDLENSGIIENHILSYE---- 407
M RAK ++ + N + R ++ + N + SY
Sbjct: 203 M--RAKGCTPNIVTYNVIINGMCREGRVDDARD--------------LLNRLFSYGCQPD 246
Query: 408 --DFTKDRKFVALEAEVKRVLQTLLGMLQKQVELITTEHGILQPTEKIYIKLVKAFLEAG 465
+T K + V + M++K P E + L++ F G
Sbjct: 247 TVSYTTLLKGLCASKRWDDVEELFAEMMEKNC----------MPNEVTFDMLIRFFCRGG 296
Query: 466 KTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSV 525
+ L + + + + + VI G +D A L+ M G +
Sbjct: 297 MVERAIQVLQQMTEH--ECATNTTLCNIVINSICKQGRVDDAFKFLNNMGSYGCNPDTIS 354
Query: 526 YASLLKAYIEANR-----------------PREVT------------------ALLRDAR 550
Y ++LK A R P EVT L+ +
Sbjct: 355 YTTVLKGLCRAERWNDAKELLKEMVRNNCPPNEVTFNTFICILCQKGLIEQAIMLIEQMQ 414
Query: 551 SAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEA 610
G + Y AL+ VQ AL LF+ M + + L+ G
Sbjct: 415 EHGCTVGVVTYNALVNGFCVQGHIDSALELFRSMP----CKPNTITYTTLLTGLCNAERL 470
Query: 611 GLMAKLLQEVKEGQRIDC--GVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTF 668
A+L+ E+ DC V +N +++FFC+K + +A + +++M G PN T+
Sbjct: 471 DAAAELVAEMLHR---DCPPNVVTFNVLVNFFCQKGFLDEAIELVEQMMEHGCTPNLITY 527
Query: 669 HSMVTG 674
+++ G
Sbjct: 528 NTLFDG 533
Score = 45.4 bits (106), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 60/302 (19%), Positives = 118/302 (39%), Gaps = 16/302 (5%)
Query: 448 QPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQA 507
QP Y L+K + + ++ + ++N ++ +I G +++A
Sbjct: 244 QPDTVSYTTLLKGLCASKRWDDVEELFAEMMEKNCM--PNEVTFDMLIRFFCRGGMVERA 301
Query: 508 HDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQS 567
+L +M ++++ ++ + + R + L + S G D Y +L+
Sbjct: 302 IQVLQQMTEHECATNTTLCNIVINSICKQGRVDDAFKFLNNMGSYGCNPDTISYTTVLKG 361
Query: 568 KIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRID 627
+ A L KEM + P F + Q GL+ + + +++ Q
Sbjct: 362 LCRAERWNDAKELLKEMVRNNCP-PNEVTFNTFICILCQK---GLIEQAIMLIEQMQEHG 417
Query: 628 C--GVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEV 685
C GV +N +++ FC + + AL+ RS+ PN T+ +++TG +
Sbjct: 418 CTVGVVTYNALVNGFC---VQGHIDSALELFRSMPCKPNTITYTTLLTGLCN-AERLDAA 473
Query: 686 TELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFIDKYKYRT 745
EL EM ++ + ++ F + GF A E+V M E + Y T
Sbjct: 474 AELVAEMLHRDCPPNV----VTFNVLVNFFCQKGFLDEAIELVEQMMEHGCTPNLITYNT 529
Query: 746 LF 747
LF
Sbjct: 530 LF 531
>gi|414887654|tpg|DAA63668.1| TPA: hypothetical protein ZEAMMB73_339081 [Zea mays]
Length = 1098
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 86/412 (20%), Positives = 161/412 (39%), Gaps = 55/412 (13%)
Query: 330 NCLLSCHLKFGDLNSASKMVLEMLQRAKEARNSLAAAMLPFNAVGVNNRTPSEQNVNCTN 389
N +L+ + GDL A+ V E +QRA + A++ V + + V
Sbjct: 212 NSILNRLAQTGDL-GATVAVFEQMQRAGALPDKFTVAIMAKAYCKVKGVVHALEFVE--- 267
Query: 390 SVDLENSGIIENHILSYEDFTKDRKFVALEAEVKRVLQTLLGMLQKQVELITTEHGILQP 449
++ G+ E ++++Y V + +R+L +L G G P
Sbjct: 268 --EMTKMGV-EVNLVAYHAVMNGYCEVGQTNDARRMLDSLPG------------RG-FSP 311
Query: 450 TEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQAHD 509
Y LVK + K E +++ ++N Q+ D+A G VI +G ++ A
Sbjct: 312 NIVTYTLLVKGYCNE-KNMEEAEGVVQEIRKNKQLVVDEAVFGAVINGYCQMGRMEDAAR 370
Query: 510 LLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKI 569
LL+EM + ++ + VY ++ Y + R E +L + G++ D Y +L+
Sbjct: 371 LLNEMVDSRLQVNLFVYNIMINGYCKLGRMVEAHNILHEMTGVGVRPDTYSYNSLVDGYC 430
Query: 570 VQKDTPGALHLFKEMKES--------------------KIPRSGHQEFEMLVKGCAQNH- 608
+ A + M + I + F ML KG A N
Sbjct: 431 KKGLMNKAFETYNTMLRNGFAATTLTYNALLKGFCSLGSIDDALRLWFLMLKKGIAPNEI 490
Query: 609 ----------EAGLMAKLLQEVKE--GQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRM 656
++G K L KE + + +N VI+ CK M +AE+ + +M
Sbjct: 491 SCSTLLDGFFKSGKTEKALNLWKETLARGLAKNTTTFNTVINGLCKIERMPEAEELVDKM 550
Query: 657 RSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEMKSFASSTSMNFDEELL 708
+ P+ T+ ++ +GY I G + + E+++ + ++ F L+
Sbjct: 551 KQWRCPPDIITYRTLFSGYCKI-GDMDRASRILNELENLGFAPTIEFFNSLI 601
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 90/428 (21%), Positives = 169/428 (39%), Gaps = 44/428 (10%)
Query: 252 NTNTFNIALAGCLLFETTRKAEQLLDIMPRIGVKADSNLLIIMAHIYERNGRREELRKLQ 311
NT TFN + G E +AE+L+D M + D +I ++ + ++ +
Sbjct: 523 NTTTFNTVINGLCKIERMPEAEELVDKMKQWRCPPD---IITYRTLFSGYCKIGDMDRAS 579
Query: 312 RHIDEAVNLSDIQFRQFYNCLLSCHLKFGDLNSASKMVLEMLQRAKEARNSLAAAMLPFN 371
R ++E NL +F+N L++ H + ++ EM R L+ + +
Sbjct: 580 RILNELENLGFAPTIEFFNSLITGHFIAKQHGKVNDILFEMSNRG------LSPNTVAYG 633
Query: 372 AVGVNNRTPSEQNVNCTNSVDLENSGIIENHILS---YEDFTKDRKFVALEAEVKRVLQT 428
A+ + + +++ G++ N + F + KF E VLQ
Sbjct: 634 ALIAGWCKEGDLHTAYNLYLEMIEKGLVPNLFICSSLVSCFYRKGKF----DEANLVLQN 689
Query: 429 LLGMLQKQVELITTEHGILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDD 488
L+G ++I I P LE GK + + ++ +
Sbjct: 690 LVG-----TDMIPD---ISAPR-----------LEIGKVANFIDTVAGGNHHSAKIMWNI 730
Query: 489 AALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRD 548
G LC LG ++ A +LL ++ G A + Y+SL+ A+ +V LRD
Sbjct: 731 VIFG----LC-KLGRIEDAKNLLADLKDKGFVADNFTYSSLIHG-CSASGFVDVAFDLRD 784
Query: 549 AR-SAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQN 607
S G+ + Y +L+ + A+ LFK++ I + ++ K C
Sbjct: 785 TMLSVGLTPNIVTYNSLIYGLCKSGELSRAVSLFKKLWTKGISPNAITYNTLIDKHCKDG 844
Query: 608 HEAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQT 667
+ + ++EG I V ++ +I+ C + M++A K L +M PN T
Sbjct: 845 YITEAFKLKQRMIEEG--IHPTVFTYSILINGLCTQGYMEEAIKLLDQMIENNVDPNYVT 902
Query: 668 FHSMVTGY 675
+ +++ GY
Sbjct: 903 YWTLIQGY 910
Score = 47.4 bits (111), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 61/280 (21%), Positives = 113/280 (40%), Gaps = 42/280 (15%)
Query: 451 EKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQAHDL 510
E ++ ++ + + G+ ++ L + LQV + +I LG + +AH++
Sbjct: 349 EAVFGAVINGYCQMGRMEDAARLLNEMVDSRLQV--NLFVYNIMINGYCKLGRMVEAHNI 406
Query: 511 LDEMHLAGVRASSSVYASLLKAYIEA---NRPREV----------------TALLRDARS 551
L EM GVR + Y SL+ Y + N+ E ALL+ S
Sbjct: 407 LHEMTGVGVRPDTYSYNSLVDGYCKKGLMNKAFETYNTMLRNGFAATTLTYNALLKGFCS 466
Query: 552 AGIQLDA-----------------SCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGH 594
G DA SC LL T AL+L+KE + ++
Sbjct: 467 LGSIDDALRLWFLMLKKGIAPNEISC-STLLDGFFKSGKTEKALNLWKETLARGLAKN-T 524
Query: 595 QEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALK 654
F ++ G + +L+ ++K+ R + + + +CK M A + L
Sbjct: 525 TTFNTVINGLCKIERMPEAEELVDKMKQ-WRCPPDIITYRTLFSGYCKIGDMDRASRILN 583
Query: 655 RMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEMKS 694
+ +LG P + F+S++TG+ I ++ +V ++ EM +
Sbjct: 584 ELENLGFAPTIEFFNSLITGH-FIAKQHGKVNDILFEMSN 622
>gi|255661198|gb|ACU25768.1| pentatricopeptide repeat-containing protein [Priva cordifolia]
Length = 426
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 68/315 (21%), Positives = 133/315 (42%), Gaps = 40/315 (12%)
Query: 447 LQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQ 506
L P Y L+ F + G + +L K E++ +V D ++I L L +
Sbjct: 5 LSPDRYTYSTLITYFGKEGLFDDALSWLQKMEQD--RVRGDLVLYSNLIELSRKLCDYSK 62
Query: 507 AHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQ 566
A + + +G+ VY S++ + +A RE +L+ + R+AG+ D Y ALL
Sbjct: 63 AISIFSRLKRSGIMPDLVVYNSMINVFGKAKLFREARSLISEMRTAGVMPDTVSYTALLT 122
Query: 567 SKIVQKDTPGALHLFKEMKESK-------------------IPRSGHQEFEMLVK-GCAQ 606
+ K AL +F EM+E K + + + F + K G
Sbjct: 123 MYVENKKFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWSMRKLGIEP 182
Query: 607 N-----------HEAGLMAKLLQEVKEGQR--IDCGVHDWNNVIHFFCKKRLMQDAEKAL 653
N +A L + + + QR I+ V +N+++ + K + A +
Sbjct: 183 NVVSYNTLLRVYGDAELFGEAIHLFRLMQRKDIEQNVVTYNSMMMIYGKTLEHEKANNLI 242
Query: 654 KRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEMKSFASSTSMNFDEELLDSVLY 713
+ M+S G PNA T+ ++++ + + GK L+ +++ S+ + D+ L +++
Sbjct: 243 QEMQSRGIEPNAITYSTIISIWGKV-GKLDRAAILFEKLR----SSGIEIDQVLYQTMIV 297
Query: 714 TFVRGGFFARANEVV 728
+ R G + A ++
Sbjct: 298 AYERAGLVSHAKRLL 312
>gi|255542744|ref|XP_002512435.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223548396|gb|EEF49887.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 546
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/186 (21%), Positives = 86/186 (46%), Gaps = 5/186 (2%)
Query: 494 VITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREV---TALLRDAR 550
VI +G L++A D++++M + GV A+ Y +L+ Y + + ++ A+L++ R
Sbjct: 169 VINGLCKVGKLNKAGDIIEDMKVRGVSANVITYNTLIDGYCKMGKIGKMYKADAILKEMR 228
Query: 551 SAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEA 610
+ GI + + L+ K+ A+ +F EM + + + L+ G N +
Sbjct: 229 ADGICPNEVTFNILIDGFCKDKNVSAAMKVFAEMNRQGV-KPNVVTYNSLINGLCNNGKV 287
Query: 611 GLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHS 670
A L++ + + N +++ FCK ++++ A + M G PN T++
Sbjct: 288 N-EATALRDQMVNSCLKPNIITHNALLNGFCKNKMVKQAGELFDDMPKQGITPNVTTYNI 346
Query: 671 MVTGYA 676
++ Y
Sbjct: 347 LIDAYC 352
Score = 49.7 bits (117), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 60/262 (22%), Positives = 98/262 (37%), Gaps = 47/262 (17%)
Query: 447 LQPTEKIYIKLVKAFLEAGKTKELT----HFLIKAEKENLQVSHDDAALGHVITLCISLG 502
++P Y L+ GK E T + K N+ ++H+ G C +
Sbjct: 267 VKPNVVTYNSLINGLCNNGKVNEATALRDQMVNSCLKPNI-ITHNALLNG----FCKN-K 320
Query: 503 WLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYE 562
+ QA +L D+M G+ + + Y L+ AY + + AL R G+ D S Y
Sbjct: 321 MVKQAGELFDDMPKQGITPNVTTYNILIDAYCKDENMEDAFALYRIMLGKGVCPDVSTYN 380
Query: 563 ALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEV-- 620
L+ + D A +L EM ++K ++ + +L+ E +LL E+
Sbjct: 381 CLIAGLCRKGDLEAARNLVSEM-DTKHLKADLITYNILIDSLCNKGEMKKALRLLDEMCR 439
Query: 621 ------------------KEGQ---------------RIDCGVHDWNNVIHFFCKKRLMQ 647
KEG R+ V +N +I FCKK ++
Sbjct: 440 KGLKPSQLTYNTMIDGYCKEGNLRAALNLRSQMEKVGRL-ANVATYNVLIKGFCKKDKLE 498
Query: 648 DAEKALKRMRSLGHLPNAQTFH 669
DA L M G +PN T+
Sbjct: 499 DANGLLNEMLEKGLIPNRMTYE 520
Score = 41.6 bits (96), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 58/128 (45%), Gaps = 5/128 (3%)
Query: 227 IGYLFQDGRVDPRKKCNAPLI--AMKPNTNTFNIALAGCLLFETTRKAEQLLDIMPRIGV 284
I L +G+V+ ++ +KPN T N L G + ++A +L D MP+ G+
Sbjct: 278 INGLCNNGKVNEATALRDQMVNSCLKPNIITHNALLNGFCKNKMVKQAGELFDDMPKQGI 337
Query: 285 KADSNLLIIMAHIYERNGRREELRKLQRHIDEAVNLSDIQFRQFYNCLLSCHLKFGDLNS 344
+ I+ Y ++ E+ L R + D+ YNCL++ + GDL +
Sbjct: 338 TPNVTTYNILIDAYCKDENMEDAFALYRIMLGKGVCPDV---STYNCLIAGLCRKGDLEA 394
Query: 345 ASKMVLEM 352
A +V EM
Sbjct: 395 ARNLVSEM 402
>gi|356557306|ref|XP_003546958.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g65820-like [Glycine max]
Length = 654
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 63/270 (23%), Positives = 114/270 (42%), Gaps = 13/270 (4%)
Query: 448 QPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQA 507
+P+ K + L+ + + GK E H L++ + ++ + D +++ G + A
Sbjct: 258 KPSVKHFTSLLYGWCKEGKLMEAKHVLVQMK--DMGIEPDIVVYNNLLGGYAQAGKMGDA 315
Query: 508 HDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQS 567
+DLL EM +++ Y L+++ + R E T L + ++ G Q D Y L+
Sbjct: 316 YDLLKEMRRKRCEPNATSYTVLIQSLCKHERLEEATRLFVEMQTNGCQADVVTYSTLISG 375
Query: 568 KIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQE-VKEGQRI 626
L EM + GH +++ + HE + +E V E Q+I
Sbjct: 376 FCKWGKIKRGYELLDEMIQQ-----GHFPNQVIYQHIMLAHEKKEELEECKELVNEMQKI 430
Query: 627 DCG--VHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTE 684
C + +N VI CK +++ + M S G P TF M+ G+ G E
Sbjct: 431 GCAPDLSIYNTVIRLACKLGEVKEGIQLWNEMESSGLSPGMDTFVIMINGFLEQGC-LVE 489
Query: 685 VTELWGEMKSFASSTSMNFD--EELLDSVL 712
E + EM T+ + +EL++S+L
Sbjct: 490 ACEYFKEMVGRGLFTAPQYGTLKELMNSLL 519
>gi|115482590|ref|NP_001064888.1| Os10g0484300 [Oryza sativa Japonica Group]
gi|22094354|gb|AAM91881.1| putative membrane-associated salt-inducible protein [Oryza sativa
Japonica Group]
gi|31432736|gb|AAP54334.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
sativa Japonica Group]
gi|78708824|gb|ABB47799.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
sativa Japonica Group]
gi|113639497|dbj|BAF26802.1| Os10g0484300 [Oryza sativa Japonica Group]
Length = 578
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 61/272 (22%), Positives = 114/272 (41%), Gaps = 18/272 (6%)
Query: 483 QVSHDDAALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIE---ANRP 539
+VS D VI+ +G L +A D+ ++ G+ S + Y SL+ Y + A
Sbjct: 186 RVSPDIYTFNTVISGLCRIGQLRKAGDVAKDIKAWGLAPSVATYNSLIDGYCKKGGAGNM 245
Query: 540 REVTALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEM 599
V LL++ AGI A + L+ +T A+ +F+EMK+ I S +
Sbjct: 246 YHVDMLLKEMVEAGISPTAVTFGVLINGYCKNSNTAAAVRVFEEMKQQGIAAS-VVTYNS 304
Query: 600 LVKGCAQNHEAGLMAKLLQEVKEGQRIDCGVH----DWNNVIHFFCKKRLMQDAEKALKR 655
L+ G + KL++E++ D G+ + V+ FCKK +M DA +
Sbjct: 305 LISGLCSEGKVEEGVKLMEEME-----DLGLSPNEITFGCVLKGFCKKGMMADANDWIDG 359
Query: 656 MRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTF 715
M P+ ++ ++ Y +G + +K + ++ + + ++ F
Sbjct: 360 MTERNVEPDVVIYNILIDVYRRLGKMEDAMA-----VKEAMAKKGISPNVTTYNCLITGF 414
Query: 716 VRGGFFARANEVVAMMEEGKMFIDKYKYRTLF 747
R G + A+ ++ M+E + D Y L
Sbjct: 415 SRSGDWRSASGLLDEMKEKGIEADVVTYNVLI 446
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/229 (21%), Positives = 95/229 (41%), Gaps = 6/229 (2%)
Query: 447 LQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQ 506
L P E + ++K F + G + ++ + N V D +I + LG ++
Sbjct: 330 LSPNEITFGCVLKGFCKKGMMADANDWIDGMTERN--VEPDVVIYNILIDVYRRLGKMED 387
Query: 507 AHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQ 566
A + + M G+ + + Y L+ + + R + LL + + GI+ D Y L+
Sbjct: 388 AMAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIG 447
Query: 567 SKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKG-CAQNHEAGLMAKLLQEVKEGQR 625
+ + + A+ L EM E + H + +++G C + + A ++ E R
Sbjct: 448 ALCCKGEVRKAVKLLDEMSEVGL-EPNHLTYNTIIQGFCDKGNIKS--AYEIRTRMEKCR 504
Query: 626 IDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTG 674
V +N I +FC+ M +A L M +PN T+ ++ G
Sbjct: 505 KRANVVTYNVFIKYFCQIGKMDEANDLLNEMLDKCLVPNGITYETIKEG 553
Score = 45.8 bits (107), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 50/226 (22%), Positives = 81/226 (35%), Gaps = 39/226 (17%)
Query: 454 YIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQAHDLLDE 513
Y L+ GK +E + E E+L +S ++ G V+ G + A+D +D
Sbjct: 302 YNSLISGLCSEGKVEEGVKLM--EEMEDLGLSPNEITFGCVLKGFCKKGMMADANDWIDG 359
Query: 514 MHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQKD 573
M V +Y L+ Y + + A+ GI + + Y L+ D
Sbjct: 360 MTERNVEPDVVIYNILIDVYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSGD 419
Query: 574 TPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRIDCGVHDW 633
A L EMKE KG I+ V +
Sbjct: 420 WRSASGLLDEMKE---------------KG----------------------IEADVVTY 442
Query: 634 NNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIG 679
N +I C K ++ A K L M +G PN T+++++ G+ G
Sbjct: 443 NVLIGALCCKGEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKG 488
Score = 41.6 bits (96), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 56/269 (20%), Positives = 99/269 (36%), Gaps = 62/269 (23%)
Query: 247 IAMKPNTNTFNIALAGCLLFETTRKAEQLLDIMPRIGVKADSNLLIIMAHIYERNGRREE 306
+ + PN TF L G A +D M V+ D + I+ +Y R G+ E+
Sbjct: 328 LGLSPNEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYNILIDVYRRLGKMED 387
Query: 307 LRKLQRHIDEAVNLSDIQFR-QFYNCLLSCHLKFGDLNSASKMVLEMLQRAKEARNSLAA 365
+ EA+ I YNCL++ + GD SAS ++ EM ++
Sbjct: 388 ----AMAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKG--------- 434
Query: 366 AMLPFNAVGVNNRTPSEQNVNCTNSVDLENSGIIENHILSYEDFTKDRKFVALEAEVKRV 425
IE +++Y + + EV++
Sbjct: 435 ---------------------------------IEADVVTYNVLI---GALCCKGEVRKA 458
Query: 426 LQTLLGMLQKQVELITTEHGILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVS 485
++ L M +E G L+P Y +++ F + G K + + I+ E +
Sbjct: 459 VKLLDEM---------SEVG-LEPNHLTYNTIIQGFCDKGNIK--SAYEIRTRMEKCRKR 506
Query: 486 HDDAALGHVITLCISLGWLDQAHDLLDEM 514
+ I +G +D+A+DLL+EM
Sbjct: 507 ANVVTYNVFIKYFCQIGKMDEANDLLNEM 535
>gi|356544457|ref|XP_003540667.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50280,
chloroplastic-like [Glycine max]
Length = 711
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 58/257 (22%), Positives = 119/257 (46%), Gaps = 28/257 (10%)
Query: 484 VSHDDAALGHVI-TLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREV 542
V + LG +I + C+ G + +A +L E+ GV +++ VY +L+ AY ++NR E
Sbjct: 335 VKWGEEVLGALIKSFCVE-GLMSEALIILSELEKKGVSSNAIVYNTLMDAYCKSNRVEEA 393
Query: 543 TALLRDARSAGIQLDASCYEAL-------LQSKIVQKDTPGALHLFKEMKESKIPRSGHQ 595
L + ++ GI+ + + L +Q +IV+K L EM+++ + + +
Sbjct: 394 EGLFIEMKTKGIKHTEATFNILMYAYSRKMQPEIVEK-------LMAEMQDAGL-KPNAK 445
Query: 596 EFEMLVKGCAQNHEAGLMA--KLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKAL 653
+ L+ + MA L+ K+G I H + +IH + + A A
Sbjct: 446 SYTCLISAYGKQKNMSDMAADAFLKMKKDG--IKPTSHSYTALIHAYSVSGWHEKAYAAF 503
Query: 654 KRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEMKSF-ASSTSMNFDEELLDSVL 712
+ M+ G P+ +T+ +++ + G T + ++W M+ + T + F+ L+D
Sbjct: 504 ENMQREGIKPSIETYTALLDAFRRAGDTQT-LMKIWKLMRRYKVEGTRVTFN-TLVDG-- 559
Query: 713 YTFVRGGFFARANEVVA 729
F + G + A +V++
Sbjct: 560 --FAKHGHYKEARDVIS 574
Score = 55.8 bits (133), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 73/335 (21%), Positives = 142/335 (42%), Gaps = 51/335 (15%)
Query: 451 EKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQAHDL 510
E++ L+K+F G E +I +E E VS + ++ +++A L
Sbjct: 339 EEVLGALIKSFCVEGLMSEA--LIILSELEKKGVSSNAIVYNTLMDAYCKSNRVEEAEGL 396
Query: 511 LDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIV 570
EM G++ + + + L+ AY +P V L+ + + AG++ +A Y L+ +
Sbjct: 397 FIEMKTKGIKHTEATFNILMYAYSRKMQPEIVEKLMAEMQDAGLKPNAKSYTCLISAYGK 456
Query: 571 QKD-TPGALHLFKEMKESKIPRSGHQ-------------------EFEML----VKGCAQ 606
QK+ + A F +MK+ I + H FE + +K +
Sbjct: 457 QKNMSDMAADAFLKMKKDGIKPTSHSYTALIHAYSVSGWHEKAYAAFENMQREGIKPSIE 516
Query: 607 NHEAGLMA--------------KLLQEVK-EGQRIDCGVHDWNNVIHFFCKKRLMQDAEK 651
+ A L A KL++ K EG R+ +N ++ F K ++A
Sbjct: 517 TYTALLDAFRRAGDTQTLMKIWKLMRRYKVEGTRV-----TFNTLVDGFAKHGHYKEARD 571
Query: 652 ALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEMKSFASSTSMNFDEELLDSV 711
+ + ++G P T++ ++ YA GG+++++ EL EM ++ ++ D ++
Sbjct: 572 VISKFANVGLHPTVMTYNMLMNAYAR-GGQHSKLPELLEEM----AAHNLKPDSVTYSTM 626
Query: 712 LYTFVRGGFFARANEVVAMMEEGKMFIDKYKYRTL 746
+Y F+R F++A M + ID Y+ L
Sbjct: 627 IYAFLRVRDFSQAFFYHQEMVKSGQVIDFNSYQKL 661
Score = 46.2 bits (108), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 53/273 (19%), Positives = 114/273 (41%), Gaps = 19/273 (6%)
Query: 453 IYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQAHDLLD 512
+Y + L +G+ ++ E +N+ H ++ ++ + D A +
Sbjct: 270 VYNAAISGLLSSGRCEDAWKVYESMEADNVLPDHVTCSIMVIVMRKLGHSAKD-AWQFFE 328
Query: 513 EMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQK 572
+M+ GV+ V +L+K++ E +L + G+ +A Y L+ +
Sbjct: 329 KMNGKGVKWGEEVLGALIKSFCVEGLMSEALIILSELEKKGVSSNAIVYNTLMDAYCKSN 388
Query: 573 DTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRIDCGVHD 632
A LF EMK I + F +L+ ++ + ++ KL+ E+++ +
Sbjct: 389 RVEEAEGLFIEMKTKGI-KHTEATFNILMYAYSRKMQPEIVEKLMAEMQDAG-LKPNAKS 446
Query: 633 WNNVIHFFCKKRLMQD-AEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGE 691
+ +I + K++ M D A A +M+ G P + ++ +++ Y+ G W E
Sbjct: 447 YTCLISAYGKQKNMSDMAADAFLKMKKDGIKPTSHSYTALIHAYSVSG---------WHE 497
Query: 692 MKSFASSTSMNFDE-----ELLDSVLYTFVRGG 719
K++A+ +M + E ++L F R G
Sbjct: 498 -KAYAAFENMQREGIKPSIETYTALLDAFRRAG 529
>gi|15221540|ref|NP_172145.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75205637|sp|Q9SHK2.1|PPR17_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g06580
gi|6692678|gb|AAF24812.1|AC007592_5 F12K11.8 [Arabidopsis thaliana]
gi|332189887|gb|AEE28008.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 500
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 63/302 (20%), Positives = 118/302 (39%), Gaps = 40/302 (13%)
Query: 480 ENLQVSHDDAALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRP 539
E L +SHD + +I L A L +M G S + SL+ + NR
Sbjct: 106 EMLGISHDLYSFTTLIDCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRF 165
Query: 540 REVTALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEM 599
E +L+ G + + Y ++ S + AL + K MK+ I R +
Sbjct: 166 YEAMSLVDQIVGLGYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGI-RPDVVTYNS 224
Query: 600 LVKGCAQNHEAGLMAKLLQEV--------------------KEGQ--------------R 625
L+ + G+ A++L ++ KEGQ
Sbjct: 225 LITRLFHSGTWGVSARILSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRS 284
Query: 626 IDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEV 685
++ + +N++I+ C L+ +A+K L + S G PNA T+++++ GY K V
Sbjct: 285 VNPNIVTYNSLINGLCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYC----KAKRV 340
Query: 686 TELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFIDKYKYRT 745
+ ++ S ++ D +++ + + G F+ A +V+ M + D Y +
Sbjct: 341 DD-GMKILCVMSRDGVDGDTFTYNTLYQGYCQAGKFSAAEKVLGRMVSCGVHPDMYTFNI 399
Query: 746 LF 747
L
Sbjct: 400 LL 401
Score = 43.5 bits (101), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 39/178 (21%), Positives = 75/178 (42%), Gaps = 3/178 (1%)
Query: 497 LCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQL 556
LCI G LD+A +L+ + G ++ Y +L+ Y +A R + +L G+
Sbjct: 299 LCIH-GLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDG 357
Query: 557 DASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKL 616
D Y L Q A + M + + F +L+ G + + G
Sbjct: 358 DTFTYNTLYQGYCQAGKFSAAEKVLGRMVSCGVHPDMYT-FNILLDGLCDHGKIGKALVR 416
Query: 617 LQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTG 674
L+++++ + + G+ +N +I CK ++DA + G P+ T+ +M+ G
Sbjct: 417 LEDLQKSKTV-VGIITYNIIIKGLCKADKVEDAWYLFCSLALKGVSPDVITYITMMIG 473
>gi|326533642|dbj|BAK05352.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 860
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 80/179 (44%), Gaps = 6/179 (3%)
Query: 518 GVRASSSVYASLLKAYIEANRPRE-VTALLRDARSAGIQLDASCYEALLQSKIVQKDTPG 576
G++ +LLK ANR E V LL G +A Y +L++ +
Sbjct: 187 GLKMDQITANTLLKCLCYANRTEEAVNVLLHRMSELGCVPNAVSYSIVLKALCDNSMSQR 246
Query: 577 ALHLFKEM-KESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEV-KEGQRIDCGVHDWN 634
AL L + M K+ + ++ G E G L E+ ++G + D V +N
Sbjct: 247 ALDLLQMMAKQGGACSPDVVAYSTVIHGFFNEGETGKACSLFHEMTRQGVKPD--VVTYN 304
Query: 635 NVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEMK 693
+I CK R M AE L++M + G P+ T+ M+ GYA + G+ E +++ EMK
Sbjct: 305 LIIDALCKARAMDKAELVLRQMTTDGAQPDTVTYSCMIHGYATL-GRLKEAAKMFREMK 362
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 63/268 (23%), Positives = 107/268 (39%), Gaps = 29/268 (10%)
Query: 481 NLQVSHDDAALGHVITLCI----SLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEA 536
N S+ AA HV T+ I G +D A + EM GV Y++++ +
Sbjct: 429 NSMKSNGIAANCHVFTILIHAYAKRGMVDDAMLIFTEMQQQGVSPDVVTYSTVISTFSRM 488
Query: 537 NRPREVTALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQE 596
R + + GIQ + + Y +++Q + A L EM IPR
Sbjct: 489 GRLTDAMEKFNQMVARGIQPNTAVYSSIIQGFCMHGGLVKAKELVSEMINKGIPRPDIVF 548
Query: 597 FEMLVKGCAQN---HEAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKAL 653
F ++ ++ +A + L ++ E GV +N++I +C M A K L
Sbjct: 549 FSSVINSLCKDGRVMDAHDIFDLATDIGERP----GVITFNSLIDGYCLVGKMDKAFKIL 604
Query: 654 KRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEMKSFASSTSMNFDEELLDSVLY 713
M +G P+ T+++++ GY G+ + L+ EM+ ++V Y
Sbjct: 605 DAMEVVGVEPDIVTYNTLLDGYFK-NGRINDGLTLFREMQRKGVKP---------NTVTY 654
Query: 714 TFVRGGFFARANEVVA-------MMEEG 734
+ G F RA VA M+E G
Sbjct: 655 GIMLAGLF-RAGRTVAARKKFHEMIESG 681
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 110/547 (20%), Positives = 209/547 (38%), Gaps = 71/547 (12%)
Query: 248 AMKPNTNTFNIALAGCLLFETTRKAEQLLDIMPRIGVKADSNLLIIMAHIYERNGRREEL 307
+KP+ T+N+ + KAE +L M G + D+ M H Y GR +E
Sbjct: 295 GVKPDVVTYNLIIDALCKARAMDKAELVLRQMTTDGAQPDTVTYSCMIHGYATLGRLKEA 354
Query: 308 RKLQRHIDEAVNLSDIQFRQFYNCLLSCHLKFGDLNSASKMVLEMLQRAKEAR------- 360
K+ R + + + +I N L+ K G A++ M + +
Sbjct: 355 AKMFREMKKRGLIPNIVT---CNSFLASLCKHGRSKEAAEFFDSMTAKGHKPDIFSYCTL 411
Query: 361 -NSLAAAMLPFNAVGVNNRTPSEQ-NVNCTNSVDLENS----GIIENHILSYEDFTKDRK 414
+ A+ + +G+ N S NC L ++ G++++ +L + + +
Sbjct: 412 LHGYASEGCFADMIGLFNSMKSNGIAANCHVFTILIHAYAKRGMVDDAMLIFTEMQQQ-- 469
Query: 415 FVALEAEV---KRVLQTL--LGMLQKQVELIT--TEHGILQPTEKIYIKLVKAFLEAG-- 465
+ +V V+ T +G L +E GI QP +Y +++ F G
Sbjct: 470 --GVSPDVVTYSTVISTFSRMGRLTDAMEKFNQMVARGI-QPNTAVYSSIIQGFCMHGGL 526
Query: 466 -KTKELTHFLIK------------------AEKENLQVSHDDAALGH-------VITL-- 497
K KEL +I + + +HD L VIT
Sbjct: 527 VKAKELVSEMINKGIPRPDIVFFSSVINSLCKDGRVMDAHDIFDLATDIGERPGVITFNS 586
Query: 498 -----CISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSA 552
C+ +G +D+A +LD M + GV Y +LL Y + R + L R+ +
Sbjct: 587 LIDGYCL-VGKMDKAFKILDAMEVVGVEPDIVTYNTLLDGYFKNGRINDGLTLFREMQRK 645
Query: 553 GIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGL 612
G++ + Y +L T A F EM ES + + +++ G +N+ A
Sbjct: 646 GVKPNTVTYGIMLAGLFRAGRTVAARKKFHEMIESGTTVT-VSIYGIILGGLCRNNCADE 704
Query: 613 MAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMV 672
L Q++ + + N +I+ K + ++A++ + + G LPN T+ M+
Sbjct: 705 AIILFQKLGT-MNVKFSITILNTMINAMYKVQRKEEAKELFATISASGLLPNESTYGVMI 763
Query: 673 TGYAAIGGKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMME 732
GG E M S + + LL+ ++ + G A+A ++ ++
Sbjct: 764 INLLKDGG-----VEDANNMFSSMEKSGIVPGSRLLNRIIRMLLEKGEIAKAGNYLSKVD 818
Query: 733 EGKMFID 739
++ ++
Sbjct: 819 GKRILLE 825
Score = 48.9 bits (115), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 66/317 (20%), Positives = 119/317 (37%), Gaps = 40/317 (12%)
Query: 449 PTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQAH 508
P Y ++KA + ++ L K+ S D A VI + G +A
Sbjct: 226 PNAVSYSIVLKALCDNSMSQRALDLLQMMAKQGGACSPDVVAYSTVIHGFFNEGETGKAC 285
Query: 509 DLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSK 568
L EM GV+ Y ++ A +A + +LR + G Q D Y ++
Sbjct: 286 SLFHEMTRQGVKPDVVTYNLIIDALCKARAMDKAELVLRQMTTDGAQPDTVTYSCMIHGY 345
Query: 569 IVQKDTPGALHLFKEMKESK-IP----------------RS-------------GHQ--- 595
A +F+EMK+ IP RS GH+
Sbjct: 346 ATLGRLKEAAKMFREMKKRGLIPNIVTCNSFLASLCKHGRSKEAAEFFDSMTAKGHKPDI 405
Query: 596 -EFEMLVKGCAQNHEAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALK 654
+ L+ G A M L +K I H + +IH + K+ ++ DA
Sbjct: 406 FSYCTLLHGYASEGCFADMIGLFNSMKS-NGIAANCHVFTILIHAYAKRGMVDDAMLIFT 464
Query: 655 RMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYT 714
M+ G P+ T+ ++++ ++ + G+ T+ E + +M + + + + S++
Sbjct: 465 EMQQQGVSPDVVTYSTVISTFSRM-GRLTDAMEKFNQM----VARGIQPNTAVYSSIIQG 519
Query: 715 FVRGGFFARANEVVAMM 731
F G +A E+V+ M
Sbjct: 520 FCMHGGLVKAKELVSEM 536
>gi|357151708|ref|XP_003575878.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g19890-like [Brachypodium distachyon]
Length = 676
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/178 (21%), Positives = 75/178 (42%), Gaps = 37/178 (20%)
Query: 502 GWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCY 561
G + A +L+++M G + + Y +L+ + + +E +LR A + G+QLD Y
Sbjct: 375 GSFNCAFELMNKMRREGFQPNIYTYNALIDGLCKKGKIQEAYKVLRMANNQGLQLDKVTY 434
Query: 562 EALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVK 621
++ Q AL LF M E+ GC +
Sbjct: 435 TVMITEHCKQGHITYALDLFNRMAEN---------------GCHPD-------------- 465
Query: 622 EGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIG 679
+H + +I +C++R M++++K + ++ +P QT+ SM+ GY +G
Sbjct: 466 --------IHTYTTLIARYCQQRQMEESQKLFDKCLAIELVPTKQTYTSMIAGYCKVG 515
Score = 43.1 bits (100), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 52/239 (21%), Positives = 94/239 (39%), Gaps = 27/239 (11%)
Query: 440 ITTEHGILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCI 499
+ T+ G L P + I + L AG L F A +++ V H T +
Sbjct: 49 VDTDPGALAPDDAI-VALSSLADSAGSAAALELFRRLASRQD--VRHLMRLYVTAATTFV 105
Query: 500 SLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDAS 559
G L AH+ + M + A+ EA R E ++ + RS G+
Sbjct: 106 DRGSLPMAHEAMRRM---------------VAAFAEAGRLPEAADMVFEMRSHGLPFCVE 150
Query: 560 CYEALLQSKIVQKDTPGALHLFKEMKESKIPRSG----HQEFEMLVKGCAQNHEAGLMAK 615
+L++ + DT G+ +++ + + R G + F L+ GC ++ +
Sbjct: 151 TANWVLRAGL---DT-GSFAYARKVFDGMVTRGGLLPDARSFRALIVGCCRDGRMEEVDA 206
Query: 616 LLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTG 674
LL V +GQ ++ FC+K +D + +RM +G PN + + + G
Sbjct: 207 LLT-VMQGQGFCLDNATCTVIVRVFCQKGRFRDVSELFRRMLEMGTPPNVVNYTAWIDG 264
>gi|357149641|ref|XP_003575182.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Brachypodium distachyon]
Length = 557
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 68/320 (21%), Positives = 127/320 (39%), Gaps = 22/320 (6%)
Query: 431 GMLQKQVELITTEHGILQPTEKI--YIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDD 488
G L++ + L+ + G L+P+ L+K +G+T E L E + + +++
Sbjct: 73 GDLEEALRLVESMSG-LEPSAAPGPCAALIKKLCASGRTAEARRVLAACEPDVM--AYNA 129
Query: 489 AALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRD 548
G+ +T G LD A L+ +M + S Y +L++ R +L D
Sbjct: 130 MVAGYCVT-----GQLDAARRLVADMPM---EPDSYTYNTLIRGLCGRGRTGNALVVLDD 181
Query: 549 ARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNH 608
G D Y LL++ + A+ L EM+ +K + ++V G Q
Sbjct: 182 MLRRGCVPDVVTYTILLEATCKRSGYKQAMKLLDEMR-AKGCAPDIITYNVVVNGICQEG 240
Query: 609 EAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTF 668
+ L+ + + +N V+ C +DAEK + M G+ PN TF
Sbjct: 241 RVDDAIEFLKSLPS-HGCEPNTVSYNIVLKGLCTAERWEDAEKLMAEMSQKGYPPNVVTF 299
Query: 669 HSMVTGYAAIGGKYTEVTELWGEMKSFASS-TSMNFDEELLDSVLYTFVRGGFFARANEV 727
+ M+ + G E+ ++ + + S+++ + +L+ F + RA
Sbjct: 300 N-MLISFLCRRGLVEPAMEVLDQIPKYGCTPNSLSY-----NPILHAFCKQKKMDRAMAF 353
Query: 728 VAMMEEGKMFIDKYKYRTLF 747
V +M + D Y TL
Sbjct: 354 VELMVSRGCYPDIVSYNTLL 373
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 43/190 (22%), Positives = 80/190 (42%), Gaps = 7/190 (3%)
Query: 506 QAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALL 565
QA LLDEM G Y ++ + R + L+ S G + + Y +L
Sbjct: 209 QAMKLLDEMRAKGCAPDIITYNVVVNGICQEGRVDDAIEFLKSLPSHGCEPNTVSYNIVL 268
Query: 566 QSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQR 625
+ + A L EM + P F ML+ + GL+ ++ + + +
Sbjct: 269 KGLCTAERWEDAEKLMAEMSQKGYP-PNVVTFNMLISFLCRR---GLVEPAMEVLDQIPK 324
Query: 626 IDCGVHD--WNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYT 683
C + +N ++H FCK++ M A ++ M S G P+ ++++++T GG+
Sbjct: 325 YGCTPNSLSYNPILHAFCKQKKMDRAMAFVELMVSRGCYPDIVSYNTLLTALCR-GGEVD 383
Query: 684 EVTELWGEMK 693
EL ++K
Sbjct: 384 AAVELLHQLK 393
>gi|218194640|gb|EEC77067.1| hypothetical protein OsI_15461 [Oryza sativa Indica Group]
Length = 548
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 100/248 (40%), Gaps = 12/248 (4%)
Query: 431 GMLQKQVELITT--EHGILQPTEKIYIKLVKAFLEAGKT---KELTHFLIKAEKENLQVS 485
G L K ELI+ GI P K + ++ + G+ K++ +I + ++
Sbjct: 206 GDLVKAKELISDMLSKGIPPPCIKFFTSIINNLCKEGRVAEGKDIVDLIIHTGQRPNLIT 265
Query: 486 HDDAALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTAL 545
+ G+ + +G + +A LLD M GV Y +L+ Y + R + L
Sbjct: 266 FNSLVDGYCL-----VGNMKEAVGLLDSMESVGVEPDIYTYNTLVDGYCKHGRIDDALTL 320
Query: 546 LRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCA 605
RD + L + Y +L + T A +F EM ES + S H +L C
Sbjct: 321 FRDMLHKRVTLTSVSYNIILHGLFQARRTVVAKEMFHEMIESGMAVSIHTYATVLGGLCR 380
Query: 606 QNHEAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNA 665
N A +L E + + +N VI K MQ+A++ + + G +P
Sbjct: 381 NNCTDE--ANMLLEKLFSMNVKFDILTFNIVIRAMFKVGRMQEAKELFAAISTYGLVPTI 438
Query: 666 QTFHSMVT 673
T+ M+T
Sbjct: 439 LTYRVMIT 446
>gi|18087893|gb|AAL59047.1|AC087182_30 putative membrane-associated salt-inducible protein,3'-partial
[Oryza sativa Japonica Group]
Length = 571
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 61/272 (22%), Positives = 114/272 (41%), Gaps = 18/272 (6%)
Query: 483 QVSHDDAALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIE---ANRP 539
+VS D VI+ +G L +A D+ ++ G+ S + Y SL+ Y + A
Sbjct: 186 RVSPDIYTFNTVISGLCRIGQLRKAGDVAKDIKAWGLAPSVATYNSLIDGYCKKGGAGNM 245
Query: 540 REVTALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEM 599
V LL++ AGI A + L+ +T A+ +F+EMK+ I S +
Sbjct: 246 YHVDMLLKEMVEAGISPTAVTFGVLINGYCKNSNTAAAVRVFEEMKQQGIAAS-VVTYNS 304
Query: 600 LVKGCAQNHEAGLMAKLLQEVKEGQRIDCGVH----DWNNVIHFFCKKRLMQDAEKALKR 655
L+ G + KL++E++ D G+ + V+ FCKK +M DA +
Sbjct: 305 LISGLCSEGKVEEGVKLMEEME-----DLGLSPNEITFGCVLKGFCKKGMMADANDWIDG 359
Query: 656 MRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTF 715
M P+ ++ ++ Y +G + +K + ++ + + ++ F
Sbjct: 360 MTERNVEPDVVIYNILIDVYRRLGKMEDAMA-----VKEAMAKKGISPNVTTYNCLITGF 414
Query: 716 VRGGFFARANEVVAMMEEGKMFIDKYKYRTLF 747
R G + A+ ++ M+E + D Y L
Sbjct: 415 SRSGDWRSASGLLDEMKEKGIEADVVTYNVLI 446
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/229 (21%), Positives = 95/229 (41%), Gaps = 6/229 (2%)
Query: 447 LQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQ 506
L P E + ++K F + G + ++ + N V D +I + LG ++
Sbjct: 330 LSPNEITFGCVLKGFCKKGMMADANDWIDGMTERN--VEPDVVIYNILIDVYRRLGKMED 387
Query: 507 AHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQ 566
A + + M G+ + + Y L+ + + R + LL + + GI+ D Y L+
Sbjct: 388 AMAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIG 447
Query: 567 SKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKG-CAQNHEAGLMAKLLQEVKEGQR 625
+ + + A+ L EM E + H + +++G C + + A ++ E R
Sbjct: 448 ALCCKGEVRKAVKLLDEMSEVGL-EPNHLTYNTIIQGFCDKGNIKS--AYEIRTRMEKCR 504
Query: 626 IDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTG 674
V +N I +FC+ M +A L M +PN T+ ++ G
Sbjct: 505 KRANVVTYNVFIKYFCQIGKMDEANDLLNEMLDKCLVPNGITYETIKEG 553
Score = 45.8 bits (107), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 50/226 (22%), Positives = 81/226 (35%), Gaps = 39/226 (17%)
Query: 454 YIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQAHDLLDE 513
Y L+ GK +E + E E+L +S ++ G V+ G + A+D +D
Sbjct: 302 YNSLISGLCSEGKVEEGVKLM--EEMEDLGLSPNEITFGCVLKGFCKKGMMADANDWIDG 359
Query: 514 MHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQKD 573
M V +Y L+ Y + + A+ GI + + Y L+ D
Sbjct: 360 MTERNVEPDVVIYNILIDVYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSGD 419
Query: 574 TPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRIDCGVHDW 633
A L EMKE KG I+ V +
Sbjct: 420 WRSASGLLDEMKE---------------KG----------------------IEADVVTY 442
Query: 634 NNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIG 679
N +I C K ++ A K L M +G PN T+++++ G+ G
Sbjct: 443 NVLIGALCCKGEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKG 488
Score = 41.2 bits (95), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 56/269 (20%), Positives = 99/269 (36%), Gaps = 62/269 (23%)
Query: 247 IAMKPNTNTFNIALAGCLLFETTRKAEQLLDIMPRIGVKADSNLLIIMAHIYERNGRREE 306
+ + PN TF L G A +D M V+ D + I+ +Y R G+ E+
Sbjct: 328 LGLSPNEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYNILIDVYRRLGKMED 387
Query: 307 LRKLQRHIDEAVNLSDIQFR-QFYNCLLSCHLKFGDLNSASKMVLEMLQRAKEARNSLAA 365
+ EA+ I YNCL++ + GD SAS ++ EM ++
Sbjct: 388 ----AMAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKG--------- 434
Query: 366 AMLPFNAVGVNNRTPSEQNVNCTNSVDLENSGIIENHILSYEDFTKDRKFVALEAEVKRV 425
IE +++Y + + EV++
Sbjct: 435 ---------------------------------IEADVVTYNVLI---GALCCKGEVRKA 458
Query: 426 LQTLLGMLQKQVELITTEHGILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVS 485
++ L M +E G L+P Y +++ F + G K + + I+ E +
Sbjct: 459 VKLLDEM---------SEVG-LEPNHLTYNTIIQGFCDKGNIK--SAYEIRTRMEKCRKR 506
Query: 486 HDDAALGHVITLCISLGWLDQAHDLLDEM 514
+ I +G +D+A+DLL+EM
Sbjct: 507 ANVVTYNVFIKYFCQIGKMDEANDLLNEM 535
>gi|356560325|ref|XP_003548443.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
mitochondrial-like [Glycine max]
Length = 746
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/253 (20%), Positives = 103/253 (40%), Gaps = 7/253 (2%)
Query: 442 TEHGILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISL 501
E G+ QP LV + G+ F + + + L+ + A +I+ +
Sbjct: 420 NEEGV-QPNVITLNTLVDGLCKHGRVHRAVEFFNEMKGKGLK--GNAATYTALISAFCGV 476
Query: 502 GWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCY 561
+++A +EM +G + VY SL+ A R + + ++ + AG LD SCY
Sbjct: 477 NNINRAMQCFEEMLSSGCSPDAVVYYSLISGLCIAGRMNDASVVVSKLKLAGFSLDRSCY 536
Query: 562 EALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQE-V 620
L+ +K L EM+E+ + + + L+ + + +K++++ +
Sbjct: 537 NVLISGFCKKKKLERVYELLTEMEETGV-KPDTITYNTLISYLGKTGDFATASKVMEKMI 595
Query: 621 KEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGG 680
KEG R V + +IH +C K+ + + K M S +P ++++
Sbjct: 596 KEGLRPS--VVTYGAIIHAYCSKKNVDEGMKIFGEMCSTSKVPPNTVIYNILIDALCRNN 653
Query: 681 KYTEVTELWGEMK 693
L +MK
Sbjct: 654 DVDRAISLMEDMK 666
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 45/248 (18%), Positives = 105/248 (42%), Gaps = 8/248 (3%)
Query: 447 LQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQ 506
++P ++ L+ + GK ++ L + + N+ + +I G D+
Sbjct: 353 VEPDVVLFNTLIDGLCKVGKEEDGLSLLEEMKMGNIN-RPNTVTYNCLIDGFFKAGNFDR 411
Query: 507 AHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQ 566
AH+L +M+ GV+ + +L+ + R + + G++ +A+ Y AL+
Sbjct: 412 AHELFRQMNEEGVQPNVITLNTLVDGLCKHGRVHRAVEFFNEMKGKGLKGNAATYTALIS 471
Query: 567 SKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGC--AQNHEAGLMAKLLQEVKEGQ 624
+ + A+ F+EM S + ++ C + ++A ++ L+
Sbjct: 472 AFCGVNNINRAMQCFEEMLSSGCSPDAVVYYSLISGLCIAGRMNDASVVVSKLKLAGFSL 531
Query: 625 RIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTE 684
C +N +I FCKK+ ++ + L M G P+ T++++++ Y G +
Sbjct: 532 DRSC----YNVLISGFCKKKKLERVYELLTEMEETGVKPDTITYNTLIS-YLGKTGDFAT 586
Query: 685 VTELWGEM 692
+++ +M
Sbjct: 587 ASKVMEKM 594
Score = 48.1 bits (113), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 65/325 (20%), Positives = 116/325 (35%), Gaps = 59/325 (18%)
Query: 501 LGWLDQAHD------LLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARS--- 551
L WL + D LL EM +R S + L+ +A R E + R
Sbjct: 288 LTWLGRGRDIKRMNELLAEMEKRKIRPSVVTFGILVNHLCKARRIDEALQVFDRLRGKGG 347
Query: 552 ---AGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKG----- 603
G++ D + L+ L L +EMK I R + L+ G
Sbjct: 348 SNWVGVEPDVVLFNTLIDGLCKVGKEEDGLSLLEEMKMGNINRPNTVTYNCLIDGFFKAG 407
Query: 604 --------CAQNHEAGLMAKLL----------------------QEVKEGQRIDCGVHDW 633
Q +E G+ ++ E+K G+ + +
Sbjct: 408 NFDRAHELFRQMNEEGVQPNVITLNTLVDGLCKHGRVHRAVEFFNEMK-GKGLKGNAATY 466
Query: 634 NNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEMK 693
+I FC + A + + M S G P+A ++S+++G I G+ + + + ++K
Sbjct: 467 TALISAFCGVNNINRAMQCFEEMLSSGCSPDAVVYYSLISGL-CIAGRMNDASVVVSKLK 525
Query: 694 SFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFIDKYKYRTLFLKYHKT 753
+ D + ++ F + R E++ MEE + D Y TL
Sbjct: 526 ----LAGFSLDRSCYNVLISGFCKKKKLERVYELLTEMEETGVKPDTITYNTLI------ 575
Query: 754 LYKGKTPKFQTEAQLKKREAALGFK 778
Y GKT F T +++ ++ G +
Sbjct: 576 SYLGKTGDFATASKVMEKMIKEGLR 600
>gi|298712182|emb|CBJ33054.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 903
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 96/217 (44%), Gaps = 37/217 (17%)
Query: 506 QAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALL 565
+A D+L M G +S + L A +A R +E L+RDAR++GI+LD Y +
Sbjct: 142 EALDILARMAELGAMPNSYCVNAALDACGKAGRVQEALGLMRDARASGIELDVVSYNCAI 201
Query: 566 QSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEG-- 623
+ + D AL + +EM+ + H ++ +K C + +A A LL E+K+G
Sbjct: 202 PACVTGGDWELALSMIREMEAEYGIKPNHITYQAAIKVCGRCGKADEAASLLIEMKDGGV 261
Query: 624 --------------QRID---------CGVHDW---NNVIHF---FCKKRLMQDAEKALK 654
+R+D +HDW NV ++ C + E+AL
Sbjct: 262 PLKTSVYSAVFNAFRRVDHWQAAASTLREIHDWPVKPNVFNYNLAICTCTDCGEWEEALD 321
Query: 655 R---MRSLGHL-PNAQTFHSMVT--GYAAIGGKYTEV 685
MR +G + P+ T++ +V G A G K E+
Sbjct: 322 LLHFMREVGGVEPDVVTYNIVVAACGKAGQGEKAIEI 358
Score = 53.5 bits (127), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 92/393 (23%), Positives = 148/393 (37%), Gaps = 35/393 (8%)
Query: 245 PLIAMKPNTNTFNIALAGCLLFETTRKAEQLLDIMPRIGVKAD----SNLLIIMAHIYER 300
P + P+ TFN A+A A +L+ MPR GV AD S+ L +AH
Sbjct: 519 PERGLMPDVITFNSAIAALSNSGRPDDAVRLMREMPRAGVAADAITYSSALTGLAHA--- 575
Query: 301 NGRREELRKLQRHIDEA-VNLSDIQFRQFYNCLLSCHLKFGDLNSASKMVLEMLQRAKEA 359
GR E+ L R + A V+ + I Y + + G + A ++ EM
Sbjct: 576 -GRWEQALSLLREMQGAGVSPTVI----CYTAAIRACGEAGKGDEALLLLREMPTAG--V 628
Query: 360 RNSLAAAMLPFNAVGVNNRTPSEQNVNCTNSVDLENSGIIENHILSYEDFTKDRKFVALE 419
+L + +A G + R EQ + N ++ G+ N +T +
Sbjct: 629 TPNLFSYSATISACGKDGRW--EQGLALLN--EMPALGLTPNEFC----YTAAITGCGIG 680
Query: 420 AEVKRVLQTLLGMLQKQVELITTEHGILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEK 479
+ +R + T M+ + QPT Y V A G+ +L L+ K
Sbjct: 681 GQWERAVATFRSMIASGI----------QPTVVGYTSAVSALAHCGEV-DLALELLSEMK 729
Query: 480 ENLQVSHDDAALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRP 539
E + ++ VI C + G + +M AG+ + Y S ++A E
Sbjct: 730 EEAGIEPNEQTYAAVILACGNGGQGHLVAQVQRDMASAGITPRLTGYLSAIRASGECGNW 789
Query: 540 REVTALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEM 599
E T+LL + +AG+ SCY A + + AL L EM + R
Sbjct: 790 SEATSLLGEMEAAGVPPTVSCYNAAITACGKSGKWQEALDLLDEMPGKGLVRD-SGTLSA 848
Query: 600 LVKGCAQNHEAGLMAKLLQEVKEGQRIDCGVHD 632
+ C + A L++E+ E R G D
Sbjct: 849 AISACQKAGRGVKAAGLVEEMLEMAREKGGERD 881
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 91/442 (20%), Positives = 163/442 (36%), Gaps = 70/442 (15%)
Query: 255 TFNIALAGCLLFETTRKAEQLLDIMPRIGVKADSNLLIIMAHIYERNGRREELRKLQRHI 314
++N AL+ C + E +A LL MP+ GVK ++++
Sbjct: 459 SYNTALSACEVGEQWGRALSLLRDMPKRGVKP-----VVIS------------------- 494
Query: 315 DEAVNLSDIQFRQFYNCLLSCHLKFGDLNSASKMVLEMLQRAKEARNSLAAAMLPFNAVG 374
YN ++S K G+ + A ++ EM +R L ++ FN+
Sbjct: 495 --------------YNTVISACGKCGEGDQALALLREMPERG------LMPDVITFNSA- 533
Query: 375 VNNRTPSEQNVNCTNSVDLENSGIIENHILSYEDFTKDRKFVALEAEVKRVLQTLL---G 431
L NSG ++ + + R VA +A T L G
Sbjct: 534 ---------------IAALSNSGRPDDAVRLMREMP--RAGVAADAITYSSALTGLAHAG 576
Query: 432 MLQKQVELITTEHGI-LQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAA 490
++ + L+ G + PT Y ++A EAGK E L+ E V+ + +
Sbjct: 577 RWEQALSLLREMQGAGVSPTVICYTAAIRACGEAGKGDE--ALLLLREMPTAGVTPNLFS 634
Query: 491 LGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDAR 550
I+ C G +Q LL+EM G+ + Y + + + A R
Sbjct: 635 YSATISACGKDGRWEQGLALLNEMPALGLTPNEFCYTAAITGCGIGGQWERAVATFRSMI 694
Query: 551 SAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEA 610
++GIQ Y + + + + AL L EMKE Q + ++ C +
Sbjct: 695 ASGIQPTVVGYTSAVSALAHCGEVDLALELLSEMKEEAGIEPNEQTYAAVILACGNGGQG 754
Query: 611 GLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHS 670
L+A++ +++ I + + + I + +A L M + G P +++
Sbjct: 755 HLVAQVQRDMASAG-ITPRLTGYLSAIRASGECGNWSEATSLLGEMEAAGVPPTVSCYNA 813
Query: 671 MVTGYAAIGGKYTEVTELWGEM 692
+T GK+ E +L EM
Sbjct: 814 AITACGK-SGKWQEALDLLDEM 834
>gi|242067038|ref|XP_002454808.1| hypothetical protein SORBIDRAFT_04g037860 [Sorghum bicolor]
gi|241934639|gb|EES07784.1| hypothetical protein SORBIDRAFT_04g037860 [Sorghum bicolor]
Length = 951
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 69/311 (22%), Positives = 125/311 (40%), Gaps = 19/311 (6%)
Query: 447 LQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISL---GW 503
L+P + Y ++ A GKT + L + ++ +++ + L TL + L G
Sbjct: 603 LEPDQATYNTMIAARCREGKTSKALKLLKEMKRNSIKPN-----LITYTTLVVGLLEAGV 657
Query: 504 LDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEA 563
+ +A LL+EM AG +S + +L+A + RP + + AG+ D + Y
Sbjct: 658 VKKAKFLLNEMASAGFAPTSLTHQRVLQACSGSRRPDVILEIHELMMGAGLHADITVYNT 717
Query: 564 LLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEG 623
L+ A + EM I +++ C +H A Q + +G
Sbjct: 718 LVHVLCCHGMARNATVVLDEMLTRGIAPDTITFNALILGHCKSSHLDNAFAIYAQMLHQG 777
Query: 624 QRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYT 683
+ + +N ++ + +A+ L M+ +G PN T+ +VTGYA K
Sbjct: 778 --LSPNIATFNTLLGGLESAGRIGEADTVLSDMKKVGLEPNNLTYDILVTGYAKKSNK-V 834
Query: 684 EVTELWGEM--KSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFIDKY 741
E L+ EM K F S +S++ F + G +A E+ + M+ +
Sbjct: 835 EALRLYCEMVSKGFIPKAST------YNSLMSDFAKAGMMNQAKELFSEMKRRGVLHTSS 888
Query: 742 KYRTLFLKYHK 752
Y L + K
Sbjct: 889 TYDILLNGWSK 899
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/247 (22%), Positives = 104/247 (42%), Gaps = 5/247 (2%)
Query: 447 LQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQ 506
+ P Y LV A AG L++ E+++ V + +I + G L +
Sbjct: 393 ITPNFVTYTVLVDAHCRAGNIDGAEQVLLQMEEKS--VIPNVVTFSSIINGLVKRGCLGK 450
Query: 507 AHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQ 566
A D + +M +G+ + Y +L+ + + + RD G++ + ++L+
Sbjct: 451 AADYMRKMKDSGIAPNVVTYGTLIDGFFKFQGQEAALDVYRDMLHEGVEANNFVVDSLVN 510
Query: 567 SKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRI 626
+ GA LFK+M E + H + L+ G + K+ QE+ E + +
Sbjct: 511 GLRKNGNIEGAEALFKDMDERGLLLD-HVNYTTLMDGLFKTGNMPAAFKVGQELME-KNL 568
Query: 627 DCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVT 686
+N I+ C +A+ LK MR+ G P+ T+++M+ GK ++
Sbjct: 569 SPDAVVYNVFINCLCTLGKFSEAKSFLKEMRNTGLEPDQATYNTMIAARCR-EGKTSKAL 627
Query: 687 ELWGEMK 693
+L EMK
Sbjct: 628 KLLKEMK 634
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 95/468 (20%), Positives = 188/468 (40%), Gaps = 70/468 (14%)
Query: 247 IAMKPNTNTFNIALAGCLLFETTRKAEQ------LLDIMPRIGVKADSNLLIIMAHIYER 300
I + PN T+ C L ++ KA + LL M GV D + + +
Sbjct: 321 IGVAPNHVTY------CTLIDSLAKARRGSESLGLLGEMVSRGVVMDLVMYTALMDRLGK 374
Query: 301 NGRREELRKLQRHIDEAVNLSDIQFRQF--YNCLLSCHLKFGDLNSASKMVLEMLQRAKE 358
G+ EE + + RH SD F Y L+ H + G+++ A +++L+M ++
Sbjct: 375 EGKIEEAKDVLRHAQ-----SDNITPNFVTYTVLVDAHCRAGNIDGAEQVLLQMEEK--- 426
Query: 359 ARNSLAAAMLPFNAV--GVNNRTPSEQNVNCTNSVDLENSGIIENHILSYE--------- 407
S+ ++ F+++ G+ R + + +++SGI N +++Y
Sbjct: 427 ---SVIPNVVTFSSIINGLVKRGCLGKAADYMRK--MKDSGIAPN-VVTYGTLIDGFFKF 480
Query: 408 -------DFTKDRKFVALEAEVKRVLQTLLGMLQKQVELITTEHGILQPTEKI------- 453
D +D +EA V+ +L+ L+K + E E+
Sbjct: 481 QGQEAALDVYRDMLHEGVEAN-NFVVDSLVNGLRKNGNIEGAEALFKDMDERGLLLDHVN 539
Query: 454 YIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQAHDLLDE 513
Y L+ + G F + E +S D I +LG +A L E
Sbjct: 540 YTTLMDGLFKTGNMP--AAFKVGQELMEKNLSPDAVVYNVFINCLCTLGKFSEAKSFLKE 597
Query: 514 MHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYE----ALLQSKI 569
M G+ + Y +++ A + + LL++ + I+ + Y LL++ +
Sbjct: 598 MRNTGLEPDQATYNTMIAARCREGKTSKALKLLKEMKRNSIKPNLITYTTLVVGLLEAGV 657
Query: 570 VQKDTPGALHLFKEMKESKI-PRS-GHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRID 627
V+K A L EM + P S HQ +++ C+ + ++ ++ E+ G +
Sbjct: 658 VKK----AKFLLNEMASAGFAPTSLTHQR---VLQACSGSRRPDVILEI-HELMMGAGLH 709
Query: 628 CGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGY 675
+ +N ++H C + ++A L M + G P+ TF++++ G+
Sbjct: 710 ADITVYNTLVHVLCCHGMARNATVVLDEMLTRGIAPDTITFNALILGH 757
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 56/253 (22%), Positives = 109/253 (43%), Gaps = 9/253 (3%)
Query: 502 GWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCY 561
G +A+ L EM GV + Y +L+ + +A R E LL + S G+ +D Y
Sbjct: 306 GQFSEAYALFREMDKIGVAPNHVTYCTLIDSLAKARRGSESLGLLGEMVSRGVVMDLVMY 365
Query: 562 EALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKG-CAQNHEAGLMAKLLQEV 620
AL+ + A + + + I + + +LV C + G LLQ
Sbjct: 366 TALMDRLGKEGKIEEAKDVLRHAQSDNITPN-FVTYTVLVDAHCRAGNIDGAEQVLLQ-- 422
Query: 621 KEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGG 680
E + + V ++++I+ K+ + A +++M+ G PN T+ +++ G+ G
Sbjct: 423 MEEKSVIPNVVTFSSIINGLVKRGCLGKAADYMRKMKDSGIAPNVVTYGTLIDGFFKFQG 482
Query: 681 KYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFIDK 740
+ + +++ +M + NF ++DS++ + G A + M+E + +D
Sbjct: 483 QEAAL-DVYRDMLHEGVEAN-NF---VVDSLVNGLRKNGNIEGAEALFKDMDERGLLLDH 537
Query: 741 YKYRTLFLKYHKT 753
Y TL KT
Sbjct: 538 VNYTTLMDGLFKT 550
>gi|229914885|gb|ACQ90610.1| putative PPR repeat protein [Eutrema halophilum]
Length = 1023
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 68/178 (38%), Gaps = 37/178 (20%)
Query: 502 GWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCY 561
G ++ A L +EM G+ + Y S++ Y + R + + +S + D Y
Sbjct: 147 GDIEAASGLFEEMKFRGLIPDTVTYNSMIDGYGKVGRLDDTVYFFEEMKSMSCEPDVITY 206
Query: 562 EALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVK 621
L+ P L F+EMK+S GL ++
Sbjct: 207 NTLINCFCKFGKLPKGLEFFREMKQS-----------------------GLKPNVVS--- 240
Query: 622 EGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIG 679
++ ++ FCK+ +MQ A K MR LG +PN T+ S+V Y IG
Sbjct: 241 -----------YSTLVDAFCKEDMMQQALKFYVDMRRLGLVPNEHTYTSLVDAYCKIG 287
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 65/268 (24%), Positives = 107/268 (39%), Gaps = 36/268 (13%)
Query: 329 YNCLLSCHLKFGDLNSASKMVLEMLQRAKEARNSLAAAMLPFNAVGVNNRTPSEQNVNCT 388
YN ++ C K GD+ +AS + EM R ++P + V N+ V
Sbjct: 136 YNIMIDCMCKEGDIEAASGLFEEMKFRG----------LIP-DTVTYNSMIDGYGKV--- 181
Query: 389 NSVDLENSGIIENHILSYEDFTKDRKFVALEAEVKRVLQTLL------GMLQKQVELI-T 441
G +++ + +E+ K ++ E +V TL+ G L K +E
Sbjct: 182 --------GRLDDTVYFFEEM----KSMSCEPDVI-TYNTLINCFCKFGKLPKGLEFFRE 228
Query: 442 TEHGILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISL 501
+ L+P Y LV AF + ++ F + + L V ++ V C +
Sbjct: 229 MKQSGLKPNVVSYSTLVDAFCKEDMMQQALKFYVDMRRLGL-VPNEHTYTSLVDAYC-KI 286
Query: 502 GWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCY 561
G L A L DEM GV + Y +L+ + R +E L +AG+ + + Y
Sbjct: 287 GNLSDAFRLADEMSQVGVEWNVVTYTALIDGLCDVERIKEAEELFGKMVTAGVIPNLASY 346
Query: 562 EALLQSKIVQKDTPGALHLFKEMKESKI 589
AL+ + K+ AL L EMK I
Sbjct: 347 TALIHGFVKAKNMDRALELLDEMKGRGI 374
>gi|356562834|ref|XP_003549673.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g74580-like [Glycine max]
Length = 747
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 58/271 (21%), Positives = 114/271 (42%), Gaps = 17/271 (6%)
Query: 487 DDAALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALL 546
DD +I G + A+ +L + G + Y SL+ + + P A+
Sbjct: 294 DDLTYNSIIDGYCKKGMVQDANRVLKDAVFKGFKPDEFTYCSLINGFCKDGDPDRAMAVF 353
Query: 547 RDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESK-IPRSGHQEFEMLVKGCA 605
+D G++ Y L++ Q AL L EM E+ +P + +++ G
Sbjct: 354 KDGLGKGLRPSIVLYNTLIKGLSQQGLILPALQLMNEMAENGCLPNI--WTYNLVINGLC 411
Query: 606 QNHEAGLMAKLLQE-VKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPN 664
+ + L+ + + +G D + +N +I +CK+ + A + + RM S G P+
Sbjct: 412 KMGCVSDASHLVDDAIAKGCPPD--IFTYNTLIDGYCKQLKLDSATEMVNRMWSQGMTPD 469
Query: 665 AQTFHSMVTGYAAIGGKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARA 724
T+++++ G GK EV E++ M+ + ++ ++DS+ +
Sbjct: 470 VITYNTLLNGLCK-AGKSEEVMEIFKAMEEKGCTPNIITYNIIVDSLCKA-------KKV 521
Query: 725 NEVVAMMEEGK---MFIDKYKYRTLFLKYHK 752
NE V ++ E K + D + TLF + K
Sbjct: 522 NEAVDLLGEMKSKGLKPDVVSFGTLFTGFCK 552
Score = 52.8 bits (125), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 60/284 (21%), Positives = 109/284 (38%), Gaps = 47/284 (16%)
Query: 451 EKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVS-HDDAALGHVITLCISLGWLDQAHD 509
E YI+ +K + GK +E + + N S H A+ +++ + G+ +QAH
Sbjct: 76 EGAYIEAMKNYGRKGKVQEAVDTFERMDFYNCDPSVHSHNAIMNIL---VEFGYHNQAHK 132
Query: 510 LLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKI 569
+ M GV++ Y +K++ + RP LLR+ G +A Y ++
Sbjct: 133 VYMRMRDRGVQSDVYTYTIRIKSFCKTARPYAALRLLRNMPELGCDSNAVAYCTVVAGLY 192
Query: 570 VQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRIDCG 629
+ A LF EM +A+ L
Sbjct: 193 DSGEHDHARELFDEM----------------------------LARCLCP---------D 215
Query: 630 VHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGG-----KYTE 684
V +N ++H CKK L+ ++E+ L ++ G PN TF+ V G G + +
Sbjct: 216 VVAFNKLVHVLCKKGLVFESERLLGKVLKRGVCPNLFTFNIFVQGLCREGALDRAVRNSR 275
Query: 685 VTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVV 728
V E ++ + D+ +S++ + + G AN V+
Sbjct: 276 VVEAEEYLRKMVNG-GFEPDDLTYNSIIDGYCKKGMVQDANRVL 318
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 56/230 (24%), Positives = 94/230 (40%), Gaps = 11/230 (4%)
Query: 506 QAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALL 565
+A + L +M G Y S++ Y + ++ +L+DA G + D Y +L+
Sbjct: 278 EAEEYLRKMVNGGFEPDDLTYNSIIDGYCKKGMVQDANRVLKDAVFKGFKPDEFTYCSLI 337
Query: 566 QSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQR 625
D A+ +FK+ K R + L+KG +Q GL+ LQ + E
Sbjct: 338 NGFCKDGDPDRAMAVFKD-GLGKGLRPSIVLYNTLIKGLSQQ---GLILPALQLMNEMAE 393
Query: 626 IDCGVHDW--NNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYT 683
C + W N VI+ CK + DA + + G P+ T+++++ GY K
Sbjct: 394 NGCLPNIWTYNLVINGLCKMGCVSDASHLVDDAIAKGCPPDIFTYNTLIDGYCK-QLKLD 452
Query: 684 EVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEE 733
TE+ M S M D +++L + G E+ MEE
Sbjct: 453 SATEMVNRM----WSQGMTPDVITYNTLLNGLCKAGKSEEVMEIFKAMEE 498
Score = 46.2 bits (108), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 39/186 (20%), Positives = 67/186 (36%), Gaps = 37/186 (19%)
Query: 494 VITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAG 553
VI +G + A L+D+ G Y +L+ Y + + T ++ S G
Sbjct: 406 VINGLCKMGCVSDASHLVDDAIAKGCPPDIFTYNTLIDGYCKQLKLDSATEMVNRMWSQG 465
Query: 554 IQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLM 613
+ D Y LL + + +FK M+E KGC N
Sbjct: 466 MTPDVITYNTLLNGLCKAGKSEEVMEIFKAMEE---------------KGCTPN------ 504
Query: 614 AKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVT 673
+ +N ++ CK + + +A L M+S G P+ +F ++ T
Sbjct: 505 ----------------IITYNIIVDSLCKAKKVNEAVDLLGEMKSKGLKPDVVSFGTLFT 548
Query: 674 GYAAIG 679
G+ IG
Sbjct: 549 GFCKIG 554
>gi|356561677|ref|XP_003549106.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g62910-like [Glycine max]
Length = 511
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/249 (21%), Positives = 102/249 (40%), Gaps = 7/249 (2%)
Query: 447 LQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQ 506
+ P Y L+ F G KE L + + +N ++ + +I G + +
Sbjct: 228 ISPDVVTYTTLIHGFCIMGHLKEAFSLLNEMKLKN--INPNVCTFNILIDALSKEGKMKE 285
Query: 507 AHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQ 566
A LL M A ++ Y SL+ Y + + + G+ D CY ++
Sbjct: 286 AKILLAVMMKACIKPDVFTYNSLIDGYFLVDEVKHAKYVFYSMAQRGVTPDVQCYTNMIN 345
Query: 567 SKIVQKDTPGALHLFKEMK-ESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQR 625
K A+ LF+EMK ++ IP + L+ G +NH L + +KE Q
Sbjct: 346 GLCKTKMVDEAMSLFEEMKHKNMIPDI--VTYNSLIDGLCKNHHLERAIALCKRMKE-QG 402
Query: 626 IDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEV 685
I V+ + ++ CK ++DA++ +R+ + G+ N + ++ G + E
Sbjct: 403 IQPDVYSYTILLDGLCKSGRLEDAKEIFQRLLAKGYHLNVHAYTVLINRLCK-AGFFDEA 461
Query: 686 TELWGEMKS 694
+L +M+
Sbjct: 462 LDLKSKMED 470
Score = 47.0 bits (110), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 71/151 (47%), Gaps = 6/151 (3%)
Query: 600 LVKGCAQNHEAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSL 659
L+ G + E +A+LL+++ EG + V +N +I+ CK +L+ DA M
Sbjct: 168 LINGLCKTGETKAVARLLRKL-EGHSVKPDVVMYNTIINSLCKNKLLGDACDVYSEMIVK 226
Query: 660 GHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGG 719
G P+ T+ +++ G+ I G E L EMK + ++ L+D++ + G
Sbjct: 227 GISPDVVTYTTLIHGF-CIMGHLKEAFSLLNEMKLKNINPNVCTFNILIDAL----SKEG 281
Query: 720 FFARANEVVAMMEEGKMFIDKYKYRTLFLKY 750
A ++A+M + + D + Y +L Y
Sbjct: 282 KMKEAKILLAVMMKACIKPDVFTYNSLIDGY 312
>gi|125579821|gb|EAZ20967.1| hypothetical protein OsJ_36620 [Oryza sativa Japonica Group]
Length = 408
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/256 (21%), Positives = 108/256 (42%), Gaps = 10/256 (3%)
Query: 449 PTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENL---QVSHDDAALGHVITLCISLGWLD 505
P + L+ G ++ HFL +A + L Q+S+ G C+ G L
Sbjct: 43 PDIITFNTLITGLCHEGHVRKAEHFLREAIRRELNPNQLSYTPLIHG----FCMR-GELM 97
Query: 506 QAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALL 565
A DLL EM G + +L+ + A + E + + D + Y L+
Sbjct: 98 VASDLLVEMMGRGHTPDVVTFGALIHGLVVAGKVSEALIVREKMTERQVFPDVNIYNVLI 157
Query: 566 QSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQR 625
++ P A ++ +EM E + + + L+ G ++ G K+ E E +
Sbjct: 158 SGLCKKRMLPAAKNILEEMLEKNV-QPDEFVYATLIDGFIRSENLGDARKIF-EFMEHKG 215
Query: 626 IDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEV 685
+ + N +I +C+ +M +A + MR +G +P+ T+ ++++GYA G
Sbjct: 216 VCPDIVSCNAMIKGYCQFGMMSEAILCMSNMRKVGCIPDEFTYTTVISGYAKQEGDTDSA 275
Query: 686 TELWGEMKSFASSTSM 701
L+ M++ A S ++
Sbjct: 276 EGLFANMQAEALSPNV 291
>gi|302794530|ref|XP_002979029.1| hypothetical protein SELMODRAFT_109908 [Selaginella moellendorffii]
gi|300153347|gb|EFJ19986.1| hypothetical protein SELMODRAFT_109908 [Selaginella moellendorffii]
Length = 500
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/256 (22%), Positives = 106/256 (41%), Gaps = 15/256 (5%)
Query: 501 LGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASC 560
+G LD++ +L EM + G S Y+SL++A +A R ++L + G D
Sbjct: 93 IGKLDESLKILSEMVMRGQTPSMQAYSSLVRALAKARRVDHASSLFDEMIRGGHHPDRLM 152
Query: 561 YEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQE----FEMLVKGCAQNHEAGLMAKL 616
+ L+ A FK+M P+ G Q + +L+ G + + L
Sbjct: 153 FYELILGLCQAGKVKDASERFKQM-----PKHGCQPNVPVYNVLLHGLCSSGQLEQANTL 207
Query: 617 LQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYA 676
E+K V +N ++ CK R +++ K + MR+ G++PN TF +++ G
Sbjct: 208 FAEMKS-HSCSPDVVTYNTLLDAVCKARRVEEGCKLFEAMRAAGYVPNVITFSTLIHGLC 266
Query: 677 AIGGKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKM 736
G+ + E++G M ++ +++ R +A E+ M + +
Sbjct: 267 RT-GELEKALEVFGSMLEAGCKP----NKYTYTTLISGLCRAEKVIQARELFEKMTQACI 321
Query: 737 FIDKYKYRTLFLKYHK 752
D Y +L Y K
Sbjct: 322 PPDAVAYNSLIAGYCK 337
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 47/230 (20%), Positives = 98/230 (42%), Gaps = 9/230 (3%)
Query: 519 VRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQKDTPGAL 578
+ A+ Y+S++K+ ++ +P E +L + +AG D + ++Q + A
Sbjct: 6 IAANVFTYSSIIKSLVKEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEKAR 65
Query: 579 HLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQE-VKEGQRIDCGVHDWNNVI 637
+++ M ES + + + +L+ G A+ + K+L E V GQ + +++++
Sbjct: 66 EVYQHMVESGY-KPDNVSYHILIHGLAKIGKLDESLKILSEMVMRGQTPS--MQAYSSLV 122
Query: 638 HFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEMKSFAS 697
K R + A M GH P+ F+ ++ G GK + +E + +M
Sbjct: 123 RALAKARRVDHASSLFDEMIRGGHHPDRLMFYELILGLCQ-AGKVKDASERFKQMPKHGC 181
Query: 698 STSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFIDKYKYRTLF 747
++ + + +L+ G +AN + A M+ D Y TL
Sbjct: 182 QPNV----PVYNVLLHGLCSSGQLEQANTLFAEMKSHSCSPDVVTYNTLL 227
Score = 46.2 bits (108), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 68/337 (20%), Positives = 122/337 (36%), Gaps = 47/337 (13%)
Query: 448 QPTEKIYIKLVKAFLEAGKTKE----LTHFLIKAEKENLQVSHDDAALGHVITLCISLGW 503
+P Y L+ + GK E L+ +++ + ++Q A ++
Sbjct: 77 KPDNVSYHILIHGLAKIGKLDESLKILSEMVMRGQTPSMQ------AYSSLVRALAKARR 130
Query: 504 LDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEA 563
+D A L DEM G ++ L+ +A + ++ + + G Q + Y
Sbjct: 131 VDHASSLFDEMIRGGHHPDRLMFYELILGLCQAGKVKDASERFKQMPKHGCQPNVPVYNV 190
Query: 564 LLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGC-AQNHEAGLMAKLLQEVKE 622
LL A LF EMK +L C A+ E G KL + ++
Sbjct: 191 LLHGLCSSGQLEQANTLFAEMKSHSCSPDVVTYNTLLDAVCKARRVEEG--CKLFEAMRA 248
Query: 623 GQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKY 682
+ V ++ +IH C+ ++ A + M G PN T+ ++++G K
Sbjct: 249 AGYVP-NVITFSTLIHGLCRTGELEKALEVFGSMLEAGCKPNKYTYTTLISGLCR-AEKV 306
Query: 683 TEVTELWGEMK----------------SFASSTSMNFDEEL----------------LDS 710
+ EL+ +M + SM+ E+L ++
Sbjct: 307 IQARELFEKMTQACIPPDAVAYNSLIAGYCKRGSMDEAEKLYREMSGGAGLQPTIVTFNT 366
Query: 711 VLYTFVRGGFFARANEVVAMMEEGKMFIDKYKYRTLF 747
++ F + G RANE+VA M + D YR L
Sbjct: 367 LIDGFCKLGKLGRANELVAEMGTKGLAADSCTYRILI 403
>gi|168054024|ref|XP_001779433.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162669118|gb|EDQ55711.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 570
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 83/180 (46%), Gaps = 5/180 (2%)
Query: 501 LGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASC 560
+G D+A L + + AG + Y ++++ + A R ++ + + +G+Q DA
Sbjct: 126 MGKYDEAIALYERVKQAGWKPDKVTYGTMVRLFGRAGYIRAAVSIFEEMKGSGVQPDAIV 185
Query: 561 YEALLQSKIVQKDTPGALHLFKEM-KESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQE 619
Y ++ AL +F+EM +E P + M N GL ++ Q
Sbjct: 186 YNIMIACLGRAGRMGHALKVFEEMEREGVKPNAVTLSTVMETYSRCGNVMEGL--EVFQR 243
Query: 620 VKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIG 679
+++G + C V +N V+ + L +AE+ L+ M GH PN T+ +M++ YA G
Sbjct: 244 LRQG--VACDVIVYNAVLKMCREAGLASEAEQYLREMTESGHQPNDWTYRNMISVYAKKG 301
Score = 47.0 bits (110), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 47/248 (18%), Positives = 103/248 (41%), Gaps = 10/248 (4%)
Query: 449 PTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQAH 508
P Y ++ + + GK E + ++ + D G ++ L G++ A
Sbjct: 111 PDVVTYSTMIDVYGKMGKYDEAIALYERVKQAGWK--PDKVTYGTMVRLFGRAGYIRAAV 168
Query: 509 DLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSK 568
+ +EM +GV+ + VY ++ A R + + G++ +A ++++
Sbjct: 169 SIFEEMKGSGVQPDAIVYNIMIACLGRAGRMGHALKVFEEMEREGVKPNAVTLSTVMETY 228
Query: 569 IVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRIDC 628
+ L +F+ +++ + ++K C EAGL ++ Q ++E
Sbjct: 229 SRCGNVMEGLEVFQRLRQG--VACDVIVYNAVLKMC---REAGLASEAEQYLREMTESGH 283
Query: 629 GVHDWN--NVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVT 686
+DW N+I + KK + +A + +M G+ + + S++ Y +Y +V
Sbjct: 284 QPNDWTYRNMISVYAKKGMAVEAHRTFSQMVEAGYQIDVMAYTSLLQAYGN-AKEYNKVQ 342
Query: 687 ELWGEMKS 694
E+ EM S
Sbjct: 343 EILDEMTS 350
>gi|21537126|gb|AAM61467.1| unknown [Arabidopsis thaliana]
Length = 766
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 71/328 (21%), Positives = 135/328 (41%), Gaps = 30/328 (9%)
Query: 449 PTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQAH 508
P Y L+ + A K ++ KE + +D +V+T+ +G + + H
Sbjct: 404 PNAVTYNCLIDGYCRAVK--------LETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHH 455
Query: 509 DL------LDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYE 562
L +M GV+ + Y +L+ A + + AG DA Y
Sbjct: 456 GLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYY 515
Query: 563 ALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVK-GCAQNHEAGLMAKLLQEVK 621
AL+ + A+ + +++KE + ML+ C +N+ + L K
Sbjct: 516 ALISGLCQVRRDHDAIRVVEKLKEGGFSLD-LLAYNMLIGLFCDKNNAEKVYEMLTDMEK 574
Query: 622 EGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGK 681
EG++ D +N +I FF K + + E+ +++MR G P T+ +++ Y ++G
Sbjct: 575 EGKKPDSIT--YNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVG-- 630
Query: 682 YTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFIDKY 741
E+ E K + +N + + + ++ F + G F +A +++ EE KM + +
Sbjct: 631 --ELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQA---LSLKEEMKMKMVRP 685
Query: 742 KYRTLFLKYHKTLYKGKTPKFQTEAQLK 769
T + L+K K Q E LK
Sbjct: 686 NVET-----YNALFKCLNEKTQGETLLK 708
>gi|15240249|ref|NP_200948.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171473|sp|Q9FLJ4.1|PP440_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g61400
gi|9757861|dbj|BAB08495.1| unnamed protein product [Arabidopsis thaliana]
gi|332010079|gb|AED97462.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 654
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 76/177 (42%), Gaps = 12/177 (6%)
Query: 504 LDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEA 563
++QA DL EM +GV + +++L+ Y + L + GI D Y A
Sbjct: 425 MEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTA 484
Query: 564 LLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEG 623
L+ + + + AL L+ +M E+ I + H F LV G + + QE
Sbjct: 485 LIDAHFKEANMKEALRLYSDMLEAGIHPNDHT-FACLVDGFWKEGRLSVAIDFYQE--NN 541
Query: 624 QRIDCGVHDWNNV-----IHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGY 675
Q+ C WN+V I C+ + A + MRS G P+ ++ SM+ G+
Sbjct: 542 QQRSC----WNHVGFTCLIEGLCQNGYILRASRFFSDMRSCGITPDICSYVSMLKGH 594
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/191 (23%), Positives = 82/191 (42%), Gaps = 8/191 (4%)
Query: 502 GWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCY 561
G + QA+ L E+ +A + + V+ +L+ + +A +L G+ + Y
Sbjct: 283 GNVRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYVY 342
Query: 562 EALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVK 621
L+ + A+ L EM+ + + +L+ G + +L Q++K
Sbjct: 343 NCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFT-YTILINGLCIEDQVAEANRLFQKMK 401
Query: 622 EGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYA----- 676
+RI +N++IH +CK+ M+ A M + G PN TF +++ GY
Sbjct: 402 -NERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDI 460
Query: 677 -AIGGKYTEVT 686
A G Y E+T
Sbjct: 461 KAAMGLYFEMT 471
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 86/209 (41%), Gaps = 8/209 (3%)
Query: 498 CISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLD 557
C G + LLDEM G++ + +Y + N+ E + + G+ +
Sbjct: 209 CFKQGLYSKKEKLLDEMTSLGIKPNVYIYTIYILDLCRDNKMEEAEKMFELMKKHGVLPN 268
Query: 558 ASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKG-CAQNHEAGLMAKL 616
Y A++ + A L+KE+ +++ F LV G C +
Sbjct: 269 LYTYSAMIDGYCKTGNVRQAYGLYKEILVAEL-LPNVVVFGTLVDGFCKARELVTARSLF 327
Query: 617 LQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYA 676
+ VK G +D ++ +N +IH CK M +A L M SL P+ T+ ++ G
Sbjct: 328 VHMVKFG--VDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILING-L 384
Query: 677 AIGGKYTEVTELWGEMKS---FASSTSMN 702
I + E L+ +MK+ F SS + N
Sbjct: 385 CIEDQVAEANRLFQKMKNERIFPSSATYN 413
>gi|255547341|ref|XP_002514728.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223546332|gb|EEF47834.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 517
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 71/310 (22%), Positives = 123/310 (39%), Gaps = 56/310 (18%)
Query: 329 YNCLLSCHLKFGDLNSASKMVLEMLQRAKEARNSLAAAMLPFNAVGVNNRTPSEQNVNCT 388
YN L+ + GD+ A ++ EM+++ E + ++ + SE +
Sbjct: 189 YNVLVDACCRQGDVLRAKSLISEMVKKGIEPTVVIYTTLI--------HGLCSESKLMEA 240
Query: 389 NSV--DLENSGIIENHILSYEDFTKDRKFVALEAEVKRVLQTLLGMLQKQVELITTEHGI 446
S+ +++SG+ N + +Y A VK+ L GML ++ GI
Sbjct: 241 ESMFRQMKDSGVFPN-LYTYNVLMDG---YCKTANVKQALHLYQGMLDDGLQPNVVTFGI 296
Query: 447 L-------------------------QPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKEN 481
L P ++ L+ + +AG E T L++ EK
Sbjct: 297 LIDALCKVRELLAARRFFVQMAKFGVVPNVVVFNSLIDGYSKAGNCSEATDLLLEMEK-- 354
Query: 482 LQVSHDDAALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYI-EANRPR 540
++S D +I LG +++A D+L M GV A+S VY SL+ Y E N +
Sbjct: 355 FKISPDVFTYSILIKNACRLGTVEEADDILKRMEKEGVPANSVVYNSLIDGYCKEGNMEK 414
Query: 541 -----EVTALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKE--------- 586
+ T D R G++ DA Y +LQ + K + L +M +
Sbjct: 415 ALEIFKATKFFSDMRRNGLRPDALAYAVMLQGHLNAKHMADVMMLHADMIKMGIVPNEVT 474
Query: 587 SKIPRSGHQE 596
S++ R G+Q+
Sbjct: 475 SQVVRRGYQD 484
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 54/259 (20%), Positives = 102/259 (39%), Gaps = 42/259 (16%)
Query: 494 VITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAG 553
++ C G + +A L+ EM G+ + +Y +L+ ++ E ++ R + +G
Sbjct: 192 LVDACCRQGDVLRAKSLISEMVKKGIEPTVVIYTTLIHGLCSESKLMEAESMFRQMKDSG 251
Query: 554 IQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLM 613
+ + Y L+ + ALHL++ G++
Sbjct: 252 VFPNLYTYNVLMDGYCKTANVKQALHLYQ----------------------------GML 283
Query: 614 AKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVT 673
LQ V + +I CK R + A + +M G +PN F+S++
Sbjct: 284 DDGLQP---------NVVTFGILIDALCKVRELLAARRFFVQMAKFGVVPNVVVFNSLID 334
Query: 674 GYAAIGGKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEE 733
GY+ G +E T+L EM+ F S + F +L + R G A++++ ME+
Sbjct: 335 GYSK-AGNCSEATDLLLEMEKFKISPDV-FTYSIL---IKNACRLGTVEEADDILKRMEK 389
Query: 734 GKMFIDKYKYRTLFLKYHK 752
+ + Y +L Y K
Sbjct: 390 EGVPANSVVYNSLIDGYCK 408
Score = 44.3 bits (103), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 59/254 (23%), Positives = 104/254 (40%), Gaps = 13/254 (5%)
Query: 447 LQPTEKIYIKLVKAFLEAG---KTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGW 503
L PT Y LV A G + K L ++K E V + G LC S
Sbjct: 182 LFPTVVTYNVLVDACCRQGDVLRAKSLISEMVKKGIEPTVVIYTTLIHG----LC-SESK 236
Query: 504 LDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEA 563
L +A + +M +GV + Y L+ Y + ++ L + G+Q + +
Sbjct: 237 LMEAESMFRQMKDSGVFPNLYTYNVLMDGYCKTANVKQALHLYQGMLDDGLQPNVVTFGI 296
Query: 564 LLQSKIVQKDTPGALHLFKEM-KESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKE 622
L+ + ++ A F +M K +P F L+ G ++ LL E+ E
Sbjct: 297 LIDALCKVRELLAARRFFVQMAKFGVVPNV--VVFNSLIDGYSKAGNCSEATDLLLEM-E 353
Query: 623 GQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKY 682
+I V ++ +I C+ +++A+ LKRM G N+ ++S++ GY G
Sbjct: 354 KFKISPDVFTYSILIKNACRLGTVEEADDILKRMEKEGVPANSVVYNSLIDGYCK-EGNM 412
Query: 683 TEVTELWGEMKSFA 696
+ E++ K F+
Sbjct: 413 EKALEIFKATKFFS 426
>gi|358347568|ref|XP_003637828.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355503763|gb|AES84966.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 529
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/233 (21%), Positives = 101/233 (43%), Gaps = 16/233 (6%)
Query: 447 LQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQ---VSHDDAALGHVITLCIS--- 500
+ PT + L+ AF + GK KE + KE+++ V+++ GH + +
Sbjct: 218 INPTVYTFSILIDAFCKEGKMKEAKNVFAVMMKEDVKPNIVTYNSLMDGHHLVNVVKKAK 277
Query: 501 ------LGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGI 554
+ +D+A +L +EMH + +Y SL+ ++ R + + G
Sbjct: 278 SIFNTMIKMVDEAMNLFEEMHFKQIYPDMVIYNSLIDGLCKSGRTPYALKFIGEMHYRGQ 337
Query: 555 QLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMA 614
D Y +LL + A+ L ++K+ I S + +L+ G ++
Sbjct: 338 PPDIFTYNSLLDALCKNYHVDKAIELLTKLKDQGIQPSV-CTYNILINGLCKSGRLKDAE 396
Query: 615 KLLQE-VKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQ 666
K+ ++ + +G D V+ +N +I FCKK L + + +M+ G P+A+
Sbjct: 397 KVFEDLLVKGYNTD--VYTYNAMIKGFCKKGLFDETLAMVSKMKDSGCSPDAK 447
>gi|357507167|ref|XP_003623872.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355498887|gb|AES80090.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 539
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 81/184 (44%), Gaps = 11/184 (5%)
Query: 501 LGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASC 560
LG + A LL + G + + +L+K R E +LL + G + D C
Sbjct: 118 LGQMGFAFSLLGNILKMGFQIDVRILTTLMKGLCLKGRVLEAVSLLHEYVDRGFRFDEVC 177
Query: 561 YEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKG-CAQ---NHEAGLMAKL 616
Y ++ T A+ +F +MK+ ++ + ++ G C Q + GL ++
Sbjct: 178 YGTIINGLCKIGKTRDAIQMFPKMKKIRV-YPNLIMYNTVIDGLCKQGLVDEACGLCTEM 236
Query: 617 LQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHL-PNAQTFHSMVTGY 675
V+ G +D V+ +N++IH FC Q A K L M G + P+ TF+ ++ G
Sbjct: 237 ---VENGIELD--VYSYNSMIHGFCSVGRFQAAVKLLDEMVVRGKVYPDVYTFNILIDGL 291
Query: 676 AAIG 679
+G
Sbjct: 292 CKLG 295
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 84/190 (44%), Gaps = 8/190 (4%)
Query: 489 AALGHVITLCISLG------WLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREV 542
AL +VI+ C + +D+A LL EMH + + Y LL ++ R
Sbjct: 346 TALPNVISYCTLINGYCKVRMVDEAMVLLTEMHNKNLVPDTVTYNCLLDGLSKSGRSLYE 405
Query: 543 TALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVK 602
L+ R++G D Y LL + AL LF+ + E I + + +L+
Sbjct: 406 WDLVEAMRASGQPADLITYNVLLDDYFKHEKFDKALALFQHIIEIGIS-PNIRTYNILLD 464
Query: 603 GCAQNHEAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHL 662
G ++ AK + ++ + + +N +IH CK+ + +AE L +M + +L
Sbjct: 465 GLCKSGRLK-YAKEIFQLLSAKGCQPNIRTYNIMIHGLCKEGFLDEAEALLYKMVNNNYL 523
Query: 663 PNAQTFHSMV 672
PN TF ++V
Sbjct: 524 PNYITFDTIV 533
>gi|115474201|ref|NP_001060699.1| Os07g0688100 [Oryza sativa Japonica Group]
gi|33146488|dbj|BAC79597.1| membrane-associated salt-inducible protein-like [Oryza sativa
Japonica Group]
gi|50509161|dbj|BAD30301.1| membrane-associated salt-inducible protein-like [Oryza sativa
Japonica Group]
gi|113612235|dbj|BAF22613.1| Os07g0688100 [Oryza sativa Japonica Group]
gi|215678726|dbj|BAG95163.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222637719|gb|EEE67851.1| hypothetical protein OsJ_25651 [Oryza sativa Japonica Group]
Length = 665
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 60/251 (23%), Positives = 111/251 (44%), Gaps = 11/251 (4%)
Query: 447 LQPTEKIYIKLVKAFLEAG---KTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGW 503
+Q IY L+ F AG K + F+ + E V+++ L H S+G
Sbjct: 366 IQLNVSIYNALISGFWRAGSIEKAYKTVSFMQRNGCEPDVVTYN-ILLNHYC----SIGM 420
Query: 504 LDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEA 563
D+A +L+ +M ++GV Y LLK +A++ + A + D G D
Sbjct: 421 TDKAENLIRKMEMSGVNPDRYSYNILLKGLCKAHQLDKAFAFVSDHMEVGGFCDIVSCNI 480
Query: 564 LLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEG 623
L+ + K AL+LFKEM I ++ + +L+ G + L +L ++
Sbjct: 481 LIDAFCRAKKVNSALNLFKEMGYKGI-QADAVTYGILINGLFGIGYSNLAEELFDQMLN- 538
Query: 624 QRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYT 683
+I V+ +N ++H CK + A+K +M P+ TF++++ + +
Sbjct: 539 TKIVPNVNVYNIMLHNLCKVGHFKHAQKIFWQMTQKEVSPDTVTFNTLIY-WLGKSSRAV 597
Query: 684 EVTELWGEMKS 694
E +L+ EM++
Sbjct: 598 EALDLFKEMRT 608
Score = 49.3 bits (116), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 51/246 (20%), Positives = 105/246 (42%), Gaps = 13/246 (5%)
Query: 504 LDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEA 563
+D+A +L M ++ + S+Y +L+ + A + + + G + D Y
Sbjct: 351 VDEAFELASRMLTLDIQLNVSIYNALISGFWRAGSIEKAYKTVSFMQRNGCEPDVVTYNI 410
Query: 564 LLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEG 623
LL T A +L ++M+ S + + +L+KG + H+ + K V +
Sbjct: 411 LLNHYCSIGMTDKAENLIRKMEMSGV-NPDRYSYNILLKGLCKAHQ---LDKAFAFVSDH 466
Query: 624 QRID--CGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGK 681
+ C + N +I FC+ + + A K M G +A T+ ++ G IG
Sbjct: 467 MEVGGFCDIVSCNILIDAFCRAKKVNSALNLFKEMGYKGIQADAVTYGILINGLFGIG-- 524
Query: 682 YTEVT-ELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFIDK 740
Y+ + EL+ +M + ++N + + +L+ + G F A ++ M + ++ D
Sbjct: 525 YSNLAEELFDQMLNTKIVPNVN----VYNIMLHNLCKVGHFKHAQKIFWQMTQKEVSPDT 580
Query: 741 YKYRTL 746
+ TL
Sbjct: 581 VTFNTL 586
>gi|414586855|tpg|DAA37426.1| TPA: hypothetical protein ZEAMMB73_447866 [Zea mays]
Length = 484
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 68/309 (22%), Positives = 120/309 (38%), Gaps = 30/309 (9%)
Query: 499 ISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDA 558
I G L A ++ DEM GV+ + + +L+ +A+ AL AGI D
Sbjct: 125 IRSGKLASARNVFDEMLRRGVQPTVVTFNTLMSGMCKASDLNNANALRGLMAKAGIAPDV 184
Query: 559 SCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQ 618
Y A +Q A+ +F+EM E + + ++ C + + +
Sbjct: 185 YTYGAFIQGLCKTGRIQDAMEMFEEMCERGLNPNTVVLTTLIDAHCKEGDVTAGLELRWE 244
Query: 619 EVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAI 678
G + D + +N +++ FC+ R M+ A ++ MR G P+ T+ +++ G
Sbjct: 245 MATRGVKAD--LVAYNALVNGFCRVRDMKAANDIVEEMRKDGLKPDKVTYTTLIDGCCKE 302
Query: 679 GGKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVA-MMEEG--- 734
G T + EMK S + D+ +++ + G A ++ MME G
Sbjct: 303 GELDTAM-----EMKQEMSDEGVALDDVTYTALISGLSKAGRSVDAERILCEMMEAGLQP 357
Query: 735 -----KMFIDKY----KYRTLFLKYHKTLYKGKTP----------KFQTEAQLKKREAAL 775
M ID + +T F + KGK P F + Q+K + L
Sbjct: 358 DNTTYTMVIDAFCKNGDVKTGFKHLKEMQNKGKNPGIVTYNVVMNGFCSLGQMKNADMLL 417
Query: 776 GFKKWLGLC 784
+G+C
Sbjct: 418 NAMLNIGVC 426
Score = 56.2 bits (134), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 83/388 (21%), Positives = 164/388 (42%), Gaps = 43/388 (11%)
Query: 324 QFRQFYNCLLSCHLKFGDLNSASKMVLEMLQRAKEAR----NSLAAAMLPFNAVGVNNRT 379
+ RQF N L+ ++ G L SA + EML+R + N+L + M +
Sbjct: 113 EARQF-NMLMRDMIRSGKLASARNVFDEMLRRGVQPTVVTFNTLMSGMC---------KA 162
Query: 380 PSEQNVNCTNSVDLENSGIIENHILSYEDFTKDRKFVALEAEVKRVLQTLLGMLQKQVEL 439
N N + + +GI + + +Y F ++ + +T G +Q +E+
Sbjct: 163 SDLNNANALRGL-MAKAGIAPD-VYTYGAF------------IQGLCKT--GRIQDAMEM 206
Query: 440 I--TTEHGILQPTEKIYIKLVKAFLEAGKTKELTHFL-IKAEKENLQVSHDDAALGHVIT 496
E G L P + L+ A + G ++T L ++ E V D A ++
Sbjct: 207 FEEMCERG-LNPNTVVLTTLIDAHCKEG---DVTAGLELRWEMATRGVKADLVAYNALVN 262
Query: 497 LCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQL 556
+ + A+D+++EM G++ Y +L+ + + ++ G+ L
Sbjct: 263 GFCRVRDMKAANDIVEEMRKDGLKPDKVTYTTLIDGCCKEGELDTAMEMKQEMSDEGVAL 322
Query: 557 DASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKL 616
D Y AL+ + A + EM E+ + + + + M++ +N + K
Sbjct: 323 DDVTYTALISGLSKAGRSVDAERILCEMMEAGL-QPDNTTYTMVIDAFCKNGDVKTGFKH 381
Query: 617 LQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYA 676
L+E++ + + G+ +N V++ FC M++A+ L M ++G PN T++ ++ G+
Sbjct: 382 LKEMQNKGK-NPGIVTYNVVMNGFCSLGQMKNADMLLNAMLNIGVCPNDITYNILLDGHC 440
Query: 677 AIGGKYTEVTEL---WGEMKSFASSTSM 701
GK + EL G + F TS+
Sbjct: 441 K-HGKVRDTEELKSAKGMVSDFGVYTSL 467
>gi|302770561|ref|XP_002968699.1| hypothetical protein SELMODRAFT_61973 [Selaginella moellendorffii]
gi|300163204|gb|EFJ29815.1| hypothetical protein SELMODRAFT_61973 [Selaginella moellendorffii]
Length = 544
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 67/316 (21%), Positives = 127/316 (40%), Gaps = 49/316 (15%)
Query: 445 GILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWL 504
G+ P Y L++ F + G+ + + L + + ++ LC +G +
Sbjct: 26 GLFAPNAHTYNVLIRGFCKGGQMHQAVSVFSDMKSSGL-LPNASTMNTLLLGLC-EIGQM 83
Query: 505 DQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEAL 564
A L EM +S+ + LL+ + A R R+ A L+D R + + Y +
Sbjct: 84 SSALKLFREMQAGPFLPTSASHNILLRGFFMAGRVRDALAHLQDMRKSSSSVATGTYNLV 143
Query: 565 LQSKIVQKDTPG----ALHLFKEMKESKI--------------PRSGHQ----------- 595
L+ + + A+ FKEMK S + SG
Sbjct: 144 LKGLCWENKSANRLEQAMEFFKEMKASGVEPDLESYHILLSALSDSGRMAEAHALFSAMT 203
Query: 596 ------EFEMLVKG-C--AQNHEA-GLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRL 645
+ +L+ G C Q +EA LM ++L+ E V ++ +I+ +CK
Sbjct: 204 CSPDIMTYNVLMDGYCKIGQTYEAQSLMKEILKAGYEPN-----VFTYSIIINCYCKLDK 258
Query: 646 MQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEMKSFASSTSMNFDE 705
+++A + +M +PNA TF++++ G+ G + +L+ EM+ ++
Sbjct: 259 VEEAWEVFMKMIESNCVPNAVTFNTLIAGFCK-AGMLEDAIKLFAEMEKIGCKATIVTYN 317
Query: 706 ELLDSVLYTFVRGGFF 721
L+DS+ RGG +
Sbjct: 318 TLIDSLCKK--RGGVY 331
Score = 44.3 bits (103), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 46/90 (51%), Gaps = 4/90 (4%)
Query: 605 AQNHEAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPN 664
A+ H+ L +L +EV G H +N +I FCK M A M+S G LPN
Sbjct: 10 ARKHDQAL--RLFKEVLAGLFAP-NAHTYNVLIRGFCKGGQMHQAVSVFSDMKSSGLLPN 66
Query: 665 AQTFHSMVTGYAAIGGKYTEVTELWGEMKS 694
A T ++++ G I G+ + +L+ EM++
Sbjct: 67 ASTMNTLLLGLCEI-GQMSSALKLFREMQA 95
Score = 44.3 bits (103), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 74/175 (42%), Gaps = 6/175 (3%)
Query: 502 GWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTA--LLRDARSAGIQLDAS 559
G L+ A L EM G +A+ Y +L+ + + R TA L AG+
Sbjct: 292 GMLEDAIKLFAEMEKIGCKATIVTYNTLIDSLCK-KRGGVYTAVDLFNKLEGAGLTPTIV 350
Query: 560 CYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQE 619
Y +L+Q + A+ F EM+ P + +L+ G + AK L++
Sbjct: 351 TYNSLIQGFCDARRLSEAMQYFDEMEGKCAPNV--ITYSILIDGLCKVRRMKEAAKTLED 408
Query: 620 VKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTG 674
+K V + +I+ FCK ++ A ++M+ G PN F++++ G
Sbjct: 409 MK-AHGYTPTVVTYGGLINGFCKCGELKSALLFFEKMKLAGCAPNTVIFNTLIDG 462
Score = 43.9 bits (102), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 57/256 (22%), Positives = 102/256 (39%), Gaps = 28/256 (10%)
Query: 443 EHGILQPTEKIYIKLVKAFLEAGKTKE-LTHFLIKAEKENLQVSHDDAALGHVITLCISL 501
+ G PT + L++ F AG+ ++ L H ++++ S A G + L
Sbjct: 94 QAGPFLPTSASHNILLRGFFMAGRVRDALAHL------QDMRKSSSSVATGTYNLVLKGL 147
Query: 502 GW-------LDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGI 554
W L+QA + EM +GV Y LL A ++ R E AL +
Sbjct: 148 CWENKSANRLEQAMEFFKEMKASGVEPDLESYHILLSALSDSGRMAEAHALFSAMTCSP- 206
Query: 555 QLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQ----EFEMLVKGCAQNHEA 610
D Y L+ T A L KE I ++G++ + +++ + +
Sbjct: 207 --DIMTYNVLMDGYCKIGQTYEAQSLMKE-----ILKAGYEPNVFTYSIIINCYCKLDKV 259
Query: 611 GLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHS 670
++ ++ E + V +N +I FCK +++DA K M +G T+++
Sbjct: 260 EEAWEVFMKMIESNCVPNAV-TFNTLIAGFCKAGMLEDAIKLFAEMEKIGCKATIVTYNT 318
Query: 671 MVTGYAAI-GGKYTEV 685
++ GG YT V
Sbjct: 319 LIDSLCKKRGGVYTAV 334
Score = 40.0 bits (92), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 45/196 (22%), Positives = 90/196 (45%), Gaps = 15/196 (7%)
Query: 505 DQAHDLLDEMHLAGVRASSS-VYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEA 563
DQA L E+ LAG+ A ++ Y L++ + + + + ++ D +S+G+ +AS
Sbjct: 14 DQALRLFKEV-LAGLFAPNAHTYNVLIRGFCKGGQMHQAVSVFSDMKSSGLLPNASTMNT 72
Query: 564 LLQSKIVQKDTPGALHLFKEMKESK-IPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKE 622
LL AL LF+EM+ +P S +L++G AG + L +++
Sbjct: 73 LLLGLCEIGQMSSALKLFREMQAGPFLPTSASH--NILLRG---FFMAGRVRDALAHLQD 127
Query: 623 GQRIDCGV--HDWNNVIHFFC----KKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYA 676
++ V +N V+ C ++ A + K M++ G P+ +++H +++ +
Sbjct: 128 MRKSSSSVATGTYNLVLKGLCWENKSANRLEQAMEFFKEMKASGVEPDLESYHILLSALS 187
Query: 677 AIGGKYTEVTELWGEM 692
G+ E L+ M
Sbjct: 188 D-SGRMAEAHALFSAM 202
>gi|218200292|gb|EEC82719.1| hypothetical protein OsI_27404 [Oryza sativa Indica Group]
Length = 665
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 60/251 (23%), Positives = 111/251 (44%), Gaps = 11/251 (4%)
Query: 447 LQPTEKIYIKLVKAFLEAG---KTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGW 503
+Q IY L+ F AG K + F+ + E V+++ L H S+G
Sbjct: 366 IQLNVSIYNALISGFWRAGSIEKAYKTVSFMQRNGCEPDVVTYN-ILLNHYC----SIGM 420
Query: 504 LDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEA 563
D+A +L+ +M ++GV Y LLK +A++ + A + D G D
Sbjct: 421 TDKAENLIRKMEMSGVNPDRYSYNILLKGLCKAHQLDKAFAFVSDHMEVGGFCDIVSCNI 480
Query: 564 LLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEG 623
L+ + K AL+LFKEM I ++ + +L+ G + L +L ++
Sbjct: 481 LIDAFCRAKKVNSALNLFKEMGYKGI-QADAVTYGILINGLFGIGYSNLAEELFDQMLN- 538
Query: 624 QRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYT 683
+I V+ +N ++H CK + A+K +M P+ TF++++ + +
Sbjct: 539 TKIVPNVNVYNIMLHNLCKVGHFKHAQKIFWQMTQKEVSPDTVTFNTLIY-WLGKSSRAV 597
Query: 684 EVTELWGEMKS 694
E +L+ EM++
Sbjct: 598 EALDLFKEMRT 608
Score = 49.3 bits (116), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 51/246 (20%), Positives = 105/246 (42%), Gaps = 13/246 (5%)
Query: 504 LDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEA 563
+D+A +L M ++ + S+Y +L+ + A + + + G + D Y
Sbjct: 351 VDEAFELASRMLTLDIQLNVSIYNALISGFWRAGSIEKAYKTVSFMQRNGCEPDVVTYNI 410
Query: 564 LLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEG 623
LL T A +L ++M+ S + + +L+KG + H+ + K V +
Sbjct: 411 LLNHYCSIGMTDKAENLIRKMEMSGV-NPDRYSYNILLKGLCKAHQ---LDKAFAFVSDH 466
Query: 624 QRID--CGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGK 681
+ C + N +I FC+ + + A K M G +A T+ ++ G IG
Sbjct: 467 MEVGGFCDIVSCNILIDAFCRAKKVNSALNLFKEMGYKGIQADAVTYGILINGLFGIG-- 524
Query: 682 YTEVT-ELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFIDK 740
Y+ + EL+ +M + ++N + + +L+ + G F A ++ M + ++ D
Sbjct: 525 YSNLAEELFDQMLNTKIVPNVN----VYNIMLHNLCKVGHFKHAQKIFWQMTQKEVSPDT 580
Query: 741 YKYRTL 746
+ TL
Sbjct: 581 VTFNTL 586
>gi|449446895|ref|XP_004141206.1| PREDICTED: pentatricopeptide repeat-containing protein At1g10910,
chloroplastic-like [Cucumis sativus]
Length = 668
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/233 (23%), Positives = 109/233 (46%), Gaps = 14/233 (6%)
Query: 503 WLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYE 562
W D + L + M G + + S Y+S +K P + + + I+
Sbjct: 119 WKDLSQ-LFEWMQETG-KTNVSSYSSYIKFMGRGLNPLKALEVYNNIEEVSIKNSIFICN 176
Query: 563 ALLQSKIVQKDTPGALHLFKEMKESKI-PRSGHQEFEMLVKGCAQ-NHEAGLMAKLLQEV 620
++L + ++ LF +MK + P + + ++ GC + H +LL+E+
Sbjct: 177 SILNCLVRNGKFDTSVKLFHQMKNDGLCPDT--VTYSTMLTGCIRVKHGYAKAMELLKEL 234
Query: 621 KE-GQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIG 679
++ G +DC + +I ++DAE+ +MR+ GH PN + S++ Y +I
Sbjct: 235 QDNGLCMDCV--SYGTLIAICASHNRLEDAERFFNQMRAEGHSPNMFHYGSLLNAY-SIN 291
Query: 680 GKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMME 732
G Y + EL +MK T + ++ +L ++L +VRGG F ++ ++++ +E
Sbjct: 292 GDYKKADELIEDMK----LTGLVPNKVILTTLLKVYVRGGLFEKSRKLLSELE 340
Score = 48.1 bits (113), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 41/173 (23%), Positives = 74/173 (42%), Gaps = 6/173 (3%)
Query: 502 GWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCY 561
G +A +L+++M L G+ + + +LLK Y+ + LL + S G + Y
Sbjct: 292 GDYKKADELIEDMKLTGLVPNKVILTTLLKVYVRGGLFEKSRKLLSELESLGYGENEMPY 351
Query: 562 EALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQN--HEAGLMAKLLQE 619
L+ A +F EMK + G+ M+ C EA L+AK +
Sbjct: 352 CLLMDGLAKAGSIREAKTVFDEMKAKNVKTDGYAHSIMISAFCRGGLLEEAKLLAKDFEA 411
Query: 620 VKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMV 672
+ R D + N ++ +C+ M+ + L++M L P+ TFH ++
Sbjct: 412 TYD--RYDIVI--LNTMLCAYCRAGEMESVMQMLRKMDDLAISPDYNTFHILI 460
>gi|297842227|ref|XP_002888995.1| hypothetical protein ARALYDRAFT_476621 [Arabidopsis lyrata subsp.
lyrata]
gi|297334836|gb|EFH65254.1| hypothetical protein ARALYDRAFT_476621 [Arabidopsis lyrata subsp.
lyrata]
Length = 863
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/247 (23%), Positives = 105/247 (42%), Gaps = 11/247 (4%)
Query: 487 DDAALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALL 546
D H++ L L++ DLL EM G + Y LL+AY ++ +E +
Sbjct: 281 DLTTYSHLVETFGKLRRLEKVSDLLSEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVF 340
Query: 547 RDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQ 606
++AG +A+ Y LL LF EMK S + +L++ +
Sbjct: 341 HQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAAT-YNILIEVFGE 399
Query: 607 NHEAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQ 666
+ L ++ E + I+ + + +I K L +DA K L+ M + +P+++
Sbjct: 400 GGYFKEVVTLFHDMVE-ENIEPDMETYEGIIFACGKGGLHEDARKILQYMTANDIVPSSK 458
Query: 667 TFHSMVT--GYAAIGGKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARA 724
+ ++ G AA+ Y E + M S+ S+ E S+LY+F RGG +
Sbjct: 459 AYTGVIEAFGQAAL---YEEALVAFNTMHEVGSNPSI----ETYHSLLYSFARGGLVKES 511
Query: 725 NEVVAMM 731
+++ +
Sbjct: 512 EAILSRL 518
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 65/281 (23%), Positives = 115/281 (40%), Gaps = 50/281 (17%)
Query: 493 HVITLCISL----GWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANR---------- 538
H+ T+ ISL G LD+ ++ DEM GV S Y +L+ AY R
Sbjct: 142 HIYTIMISLLGREGLLDKCLEVFDEMPSQGVSRSVFSYTALINAYGRNGRYETSLELLDR 201
Query: 539 -------PREVT-------------------ALLRDARSAGIQLDASCYEALLQSKIVQK 572
P +T L + R GIQ D Y LL + ++
Sbjct: 202 MKNDKISPSILTYNTVINACARGGLDWEGLLGLFAEMRHEGIQPDIVTYNTLLSACAIRG 261
Query: 573 DTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRIDCGVHD 632
A +F+ M + I + LV+ + ++ LL E+ G + +
Sbjct: 262 LGDEAEMVFRTMNDGGIV-PDLTTYSHLVETFGKLRRLEKVSDLLSEMASGGSLP-DITS 319
Query: 633 WNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEM 692
+N ++ + K +++A +M++ G PNA T+ ++ + G+Y +V +L+ EM
Sbjct: 320 YNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQ-SGRYDDVRQLFLEM 378
Query: 693 KSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEE 733
K S++ + D + ++ F GG+F EVV + +
Sbjct: 379 K----SSNTDPDAATYNILIEVFGEGGYF---KEVVTLFHD 412
>gi|224085950|ref|XP_002307751.1| predicted protein [Populus trichocarpa]
gi|222857200|gb|EEE94747.1| predicted protein [Populus trichocarpa]
Length = 480
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 60/261 (22%), Positives = 108/261 (41%), Gaps = 17/261 (6%)
Query: 450 TEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQAHD 509
T + ++ L++ ++ AG E H + E N + D A +I++ QA +
Sbjct: 128 TVETFLILMRRYVRAGLAAEAIHAFNRMEDYNCK--PDKIAFSILISILCRERRASQAQE 185
Query: 510 LLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKI 569
D + VY +L++ + A E + + + AGI+ + Y ++ S
Sbjct: 186 FFDSLK-DKFEPDVIVYTNLVRGWCRAGNISEAERVFGEMKVAGIKPNVYTYSIVIDSLC 244
Query: 570 VQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNH-EAGLMAKLLQEVKEGQRIDC 628
A +F EM ++ G Q + + H +AG K+LQ + +R+ C
Sbjct: 245 RCGQITRAHDIFAEMLDA-----GCQPNSITYNSLMRIHVKAGRTEKVLQVYNQMKRLGC 299
Query: 629 --GVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGG------ 680
+N +I CK ++DA K + M G PNA TF+++ A +G
Sbjct: 300 EPDTVTYNFLIETHCKDENLEDAIKVIGLMAKKGCAPNASTFNTLFGCIAKLGDVNAAHR 359
Query: 681 KYTEVTELWGEMKSFASSTSM 701
Y ++ EL E + +T M
Sbjct: 360 MYKKMKELNCEANTVTYNTLM 380
>gi|449520323|ref|XP_004167183.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Cucumis sativus]
Length = 605
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 65/300 (21%), Positives = 116/300 (38%), Gaps = 9/300 (3%)
Query: 447 LQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQ 506
+ PT Y L+ F GK +E E N V + +I + G + +
Sbjct: 273 MTPTVISYTSLIHGFCCGGKWEEAKRLF--NEMVNQGVQPNVVTFNVLIDVLCKEGKVIE 330
Query: 507 AHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQ 566
A DLL+ M G+ + Y SL++ + L S G + D CY L+
Sbjct: 331 AKDLLEVMIQRGIVPNLLTYNSLIEGFCLVGDLNSARELFVSMPSKGCEPDVICYTVLIN 390
Query: 567 SKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRI 626
A+ L+ M + R + + L+ G Q + G KL +K I
Sbjct: 391 GYCKTSKVEEAMKLYNGMLQVG-KRPDVKTYGALLTGLFQGGKVGDAKKLFGVMKV-YGI 448
Query: 627 DCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVT 686
++ + ++ CK + +A + +++S + + F+ ++ G GK
Sbjct: 449 PGDLYIYGIFLNGLCKNGCLFEAMELFNKLKSYNIKLDIECFNCLIDGLCK-AGKLETAW 507
Query: 687 ELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFIDKYKYRTL 746
EL+ ++ + D + +++ F RGG +AN + ME+ DK Y TL
Sbjct: 508 ELFEKL----PQEELQPDVVTYNIMIHEFCRGGQVVKANILFQKMEKNGCTPDKITYATL 563
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/209 (22%), Positives = 83/209 (39%), Gaps = 7/209 (3%)
Query: 489 AALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRD 548
++ H+++ + Q L ++M L+G+ LL NR E A++
Sbjct: 97 SSFTHLLSGLAKIKHYSQVFYLYNQMRLSGISPDCCTLNILLNCLCNVNRVGEGLAVMAG 156
Query: 549 ARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNH 608
G D Y L++ ++ A LF M++ + + L+KG +
Sbjct: 157 ILRRGYIPDIVTYTTLIKGLCMEHRISKAALLFTRMQKLGCTPNA-ITYGTLMKGLCRTG 215
Query: 609 EAGLMAKLLQEVKE-----GQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLP 663
+ KL QE+ G V ++ +I CK R +A + M+ G P
Sbjct: 216 NISIALKLHQEMLNDSSLYGINFKPVVISYSIIIDALCKDRREDEARDLFEEMKVQGMTP 275
Query: 664 NAQTFHSMVTGYAAIGGKYTEVTELWGEM 692
++ S++ G+ GGK+ E L+ EM
Sbjct: 276 TVISYTSLIHGFCC-GGKWEEAKRLFNEM 303
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 43/193 (22%), Positives = 83/193 (43%), Gaps = 5/193 (2%)
Query: 505 DQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEAL 564
D+A DL +EM + G+ + Y SL+ + + E L + + G+Q + + L
Sbjct: 259 DEARDLFEEMKVQGMTPTVISYTSLIHGFCCGGKWEEAKRLFNEMVNQGVQPNVVTFNVL 318
Query: 565 LQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKG-CAQNHEAGLMAKLLQEVKEG 623
+ + A L + M + I + L++G C + +G
Sbjct: 319 IDVLCKEGKVIEAKDLLEVMIQRGI-VPNLLTYNSLIEGFCLVGDLNSARELFVSMPSKG 377
Query: 624 QRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYT 683
D V + +I+ +CK +++A K M +G P+ +T+ +++TG GGK
Sbjct: 378 CEPD--VICYTVLINGYCKTSKVEEAMKLYNGMLQVGKRPDVKTYGALLTGLFQ-GGKVG 434
Query: 684 EVTELWGEMKSFA 696
+ +L+G MK +
Sbjct: 435 DAKKLFGVMKVYG 447
>gi|12324348|gb|AAG52140.1|AC022355_1 hypothetical protein; 19198-19943 [Arabidopsis thaliana]
Length = 233
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 86/197 (43%), Gaps = 23/197 (11%)
Query: 525 VYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEM 584
Y +L+K + +A R E L R+ G+ + Y L+Q D A +FKEM
Sbjct: 16 TYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEM 75
Query: 585 KESKIPRSGHQEFEMLVKGCAQNHEA-------GLMAKLL---QEVKEGQRIDCG----- 629
+P + +L+ G +N + G M K + +V++G + C
Sbjct: 76 VSDGVPPD-IMTYNILLDGLCKNGKLEKALVVFGYMQKRMCKAGKVEDGWDLFCSLSLKG 134
Query: 630 ----VHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEV 685
V + +I FCKK ++A ++M+ G LP++ T+++++ + G K
Sbjct: 135 VKPNVVTYTTMISGFCKKGFKEEAYTLFRKMKEDGPLPDSGTYNTLIRAHLRDGDKAASA 194
Query: 686 TELWGEMKS--FASSTS 700
EL EM+S FA S
Sbjct: 195 -ELIKEMRSCRFAGDAS 210
>gi|356560286|ref|XP_003548424.1| PREDICTED: pentatricopeptide repeat-containing protein At4g01030,
mitochondrial-like [Glycine max]
Length = 911
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 96/213 (45%), Gaps = 11/213 (5%)
Query: 486 HDDAALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTAL 545
H+ A+ +I+ L+ A DLL EM +GV+ + SLL ++ V
Sbjct: 296 HNSASWNSIISSYAVNDCLNGAWDLLQEMESSGVKPDIITWNSLLSGHLLQGSYENVLTN 355
Query: 546 LRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCA 605
R +SAG + D+ + LQ+ I G +L KE+ I RS + E V C
Sbjct: 356 FRSLQSAGFKPDSCSITSALQAVI----GLGCFNLGKEI-HGYIMRS---KLEYDVYVCT 407
Query: 606 QNHEAGLMAKLLQ--EVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLP 663
+ + L EV + + WN++I + K L +AEK L +M+ G P
Sbjct: 408 SLVDKYIKNDCLDKAEVVFHHTKNKNICAWNSLISGYTYKGLFDNAEKLLNQMKEEGIKP 467
Query: 664 NAQTFHSMVTGYAAIGGKYTEVTELWGEMKSFA 696
+ T++S+V+GY ++ G+ E + +KS
Sbjct: 468 DLVTWNSLVSGY-SMSGRSEEALAVINRIKSLG 499
>gi|255551759|ref|XP_002516925.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223544013|gb|EEF45539.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 901
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 103/236 (43%), Gaps = 18/236 (7%)
Query: 502 GWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCY 561
G +D A+ L ++M + ++ VY SL+K++ + R + + ++ G D
Sbjct: 491 GRVDDAYRLYEQMLDSDKIPNAVVYTSLIKSFFKCGRKEDGHKIFKEMIHRGCSPDLRLL 550
Query: 562 EALLQSKIVQKDTPGALHLFKEMKESK-IPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEV 620
A + +T LF+E+K IP + +L+ G + A +L +
Sbjct: 551 NAYMDCVFKAGETGKGRALFEEIKSRGFIPDV--MSYSILIHGLVKAGFARETYELFYAM 608
Query: 621 KE-GQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIG 679
KE G +D H +N I FCK + A + L+ M++ G P T+ S++ G A I
Sbjct: 609 KEQGCVLD--THAYNTFIDGFCKSGKVNKAYQLLEEMKTKGRQPTVVTYGSVIDGLAKI- 665
Query: 680 GKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGF--FARANEVVAMMEE 733
+ E L+ E KS L+ V+Y+ + GF R +E +MEE
Sbjct: 666 DRLDEAYMLFEEAKSNGLE---------LNVVIYSSLIDGFGKVGRIDEAYLIMEE 712
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 67/292 (22%), Positives = 125/292 (42%), Gaps = 20/292 (6%)
Query: 449 PTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQAH 508
P Y L+ ++AG +E T+ L A KE V A + C S G +++A+
Sbjct: 580 PDVMSYSILIHGLVKAGFARE-TYELFYAMKEQGCVLDTHAYNTFIDGFCKS-GKVNKAY 637
Query: 509 DLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQS- 567
LL+EM G + + Y S++ + +R E L +A+S G++L+ Y +L+
Sbjct: 638 QLLEEMKTKGRQPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGLELNVVIYSSLIDGF 697
Query: 568 -KIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRI 626
K+ + D A + +E+ + + + + + L+ + E Q +K +
Sbjct: 698 GKVGRIDE--AYLIMEELMQKGLTPNVYT-WNCLLDALVKAEEINEALVCFQNMKNLKGT 754
Query: 627 DCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVT 686
+ ++ +I+ C+ R A + M+ G PN T+ +M+ G A G E +
Sbjct: 755 PNHI-TYSILINGLCRVRKFNKAFVFWQEMQKQGLKPNTITYTTMIAGLAK-AGNIAEAS 812
Query: 687 ELWGEMKSFASSTSMNFDEELLDSVLYTFVRGG--FFARANEVVAMMEEGKM 736
L+ K+ + + DS Y + G + RA E + EE +M
Sbjct: 813 SLFERFKA---------NGGVPDSASYNAIIEGLSYSRRAMEAYKIFEETRM 855
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 45/232 (19%), Positives = 101/232 (43%), Gaps = 5/232 (2%)
Query: 443 EHGILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLG 502
E G + T Y + F ++GK + L + + + Q + G VI +
Sbjct: 610 EQGCVLDTHA-YNTFIDGFCKSGKVNKAYQLLEEMKTKGRQPTV--VTYGSVIDGLAKID 666
Query: 503 WLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYE 562
LD+A+ L +E G+ + +Y+SL+ + + R E ++ + G+ + +
Sbjct: 667 RLDEAYMLFEEAKSNGLELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWN 726
Query: 563 ALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKE 622
LL + + ++ AL F+ MK K H + +L+ G + + QE+++
Sbjct: 727 CLLDALVKAEEINEALVCFQNMKNLK-GTPNHITYSILINGLCRVRKFNKAFVFWQEMQK 785
Query: 623 GQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTG 674
Q + + +I K + +A +R ++ G +P++ ++++++ G
Sbjct: 786 -QGLKPNTITYTTMIAGLAKAGNIAEASSLFERFKANGGVPDSASYNAIIEG 836
Score = 47.8 bits (112), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 85/190 (44%), Gaps = 3/190 (1%)
Query: 504 LDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEA 563
D +L EM +AG S+ L+ + I++N+ RE L++ R + S Y
Sbjct: 144 FDYFEQILGEMSIAGFGPSTKTCIELILSCIKSNKLREGFDLIQCMRKFKFRPAFSAYTT 203
Query: 564 LLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEG 623
L+ + +++ L LF +M+E S H F +++ A+ LL E+K
Sbjct: 204 LIGALSSVQESDIMLTLFHQMQELGYEVSVHL-FTTVIRVFAREGRLDAALSLLDEMKS- 261
Query: 624 QRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYT 683
+ + +N I F K + A K ++S G LP+ T+ SM+ G G +
Sbjct: 262 NCLHADIVLYNVCIDCFGKAGKVDMAWKFFHEIKSHGLLPDDVTYTSMI-GVLCKGNRLD 320
Query: 684 EVTELWGEMK 693
E E++ +M+
Sbjct: 321 EAVEIFEQME 330
Score = 40.8 bits (94), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 55/269 (20%), Positives = 104/269 (38%), Gaps = 15/269 (5%)
Query: 453 IYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQAHDLLD 512
+Y + F +AGK F + + L DD +I + LD+A ++ +
Sbjct: 270 LYNVCIDCFGKAGKVDMAWKFFHEIKSHGLL--PDDVTYTSMIGVLCKGNRLDEAVEIFE 327
Query: 513 EMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQK 572
+M + Y +++ Y A + E +LL ++ G Y +L +
Sbjct: 328 QMEQNRNVPCAYAYNTMIMGYGSAGKFDEAYSLLERQKARGCIPSVIAYNCILTCLGKKG 387
Query: 573 DTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRIDCGVHD 632
AL F+EMK+ P + +L+ + E K+ +KE V
Sbjct: 388 RLGEALRTFEEMKKDAAPN--LSTYNVLIDMLCKAGEVEAAFKVRDAMKEAGLFP-NVMT 444
Query: 633 WNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEM 692
N +I CK + + +A + M P+ TF S++ G G+ + L+ +M
Sbjct: 445 VNIMIDRLCKAKKLDEACSIFEGMNHKICSPDEVTFCSLIDGLGK-QGRVDDAYRLYEQM 503
Query: 693 KSFASSTSMNFDEELLDSVLYTFVRGGFF 721
+++ ++V+YT + FF
Sbjct: 504 LD---------SDKIPNAVVYTSLIKSFF 523
>gi|299471045|emb|CBN78905.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 755
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 65/306 (21%), Positives = 127/306 (41%), Gaps = 9/306 (2%)
Query: 447 LQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQ 506
L P Y ++A +G+ KE L + E + V+ D + I C G +
Sbjct: 281 LTPETISYNMAIRACGRSGRWKEAVEVLRQMESQG--VTPDVISYDAAIKACGGGGQWET 338
Query: 507 AHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQ 566
+ DLLDEM GV ++ + S + A + + + LLR+ + G+ DA+ + + +
Sbjct: 339 SVDLLDEMAGRGVAPNTIHFNSAIVACGKGGQWEKAVELLREVTALGLTPDATSFNSAIA 398
Query: 567 SKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRI 626
+ AL L KEM ++ + + ++ C + + + +L +++ + +
Sbjct: 399 ACTKSGRWKEALELLKEMPAKRL-KPDAISYNSAIEACGKGGQWEMALELRRQMPT-KGL 456
Query: 627 DCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVT 686
V N I ++ Q+ + L++M + G PN T++S + GG++ +
Sbjct: 457 TPNVISSNIAIRACGERGRWQEGLELLRQMPAQGLTPNVITYNSAIK-TCGKGGQWEKAL 515
Query: 687 ELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFIDKYKYRTL 746
+L +MK A M D +S + + G + A ++ M + D Y
Sbjct: 516 DLLAKMKELA----MTPDSITYNSAIAACSKRGRWKEAVALLREMPGQGLTPDVISYTAA 571
Query: 747 FLKYHK 752
Y K
Sbjct: 572 IDAYGK 577
Score = 44.3 bits (103), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 53/229 (23%), Positives = 95/229 (41%), Gaps = 18/229 (7%)
Query: 458 VKAFLEAGKTKELTHFLIKAEKENLQ---VSHDDAALGHVITLCISLGWLDQAHDLLDEM 514
++A E G+ +E L + + L ++++ A I C G ++A DLL +M
Sbjct: 467 IRACGERGRWQEGLELLRQMPAQGLTPNVITYNSA-----IKTCGKGGQWEKALDLLAKM 521
Query: 515 HLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQKDT 574
+ S Y S + A + R +E ALLR+ G+ D Y A + +
Sbjct: 522 KELAMTPDSITYNSAIAACSKRGRWKEAVALLREMPGQGLTPDVISYTAAIDAYGKNGQW 581
Query: 575 PGALHLFKEMKESKIPRSGHQE----FEMLVKGCAQNHEAGLMAKLLQEVKEGQRIDCGV 630
A+ L ++M P G + ++K C + E LL+E+KE + +
Sbjct: 582 ERAVELLRQM-----PTKGLTPNVITYNSVIKACGRGGEWEKALDLLKELKE-TAVAPDL 635
Query: 631 HDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIG 679
+N I K+ ++A L+ M + G P+ ++ S + A G
Sbjct: 636 MSYNLAISACGKRGRWEEALDLLREMPAEGLTPDVISYTSAIRACNAEG 684
Score = 42.4 bits (98), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 58/275 (21%), Positives = 105/275 (38%), Gaps = 9/275 (3%)
Query: 474 LIKAEKENLQVSHDDAALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAY 533
L++ E VS + I C S + A LL EM V Y S +KA
Sbjct: 166 LLREIPEQEGVSPNVFCYNSAIEACGSGDQWEIAVSLLREMADREVVPDEISYNSAIKAC 225
Query: 534 IEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKI-PRS 592
+ V LLR+ S G+ DA Y +++ + AL + EM + P +
Sbjct: 226 GRGGQWERVIGLLREMPSVGLTPDAITYNSVITGCGKEGQWKEALSVLTEMSAKGLTPET 285
Query: 593 GHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKA 652
+ M ++ C ++ ++L+++ E Q + V ++ I + +
Sbjct: 286 --ISYNMAIRACGRSGRWKEAVEVLRQM-ESQGVTPDVISYDAAIKACGGGGQWETSVDL 342
Query: 653 LKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEMKSFASSTSMNFDEELLDSVL 712
L M G PN F+S + GG++ + EL E+ + + D +S +
Sbjct: 343 LDEMAGRGVAPNTIHFNSAIVACGK-GGQWEKAVELLREVTALG----LTPDATSFNSAI 397
Query: 713 YTFVRGGFFARANEVVAMMEEGKMFIDKYKYRTLF 747
+ G + A E++ M ++ D Y +
Sbjct: 398 AACTKSGRWKEALELLKEMPAKRLKPDAISYNSAI 432
>gi|297823811|ref|XP_002879788.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297325627|gb|EFH56047.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 867
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/218 (21%), Positives = 89/218 (40%), Gaps = 34/218 (15%)
Query: 491 LGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDAR 550
+ +V++ + +D+A ++ ++M L GV + L++A + +P E + R
Sbjct: 207 VNNVLSSLVRSNLIDEAKEIYNKMVLIGVAGDNVTTQLLMRASLRERKPEEAMKIFRRVM 266
Query: 551 SAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQ--NH 608
S G + D + +Q+ KD AL L +EM+E + + + ++ C + N
Sbjct: 267 SRGAEPDGLLFSLAVQAACKMKDLVMALDLLREMREKGGVPASQETYTSVIVACVKEGNM 326
Query: 609 EAGLMAK-----------------LLQEVKEGQRIDCGVHDWNN---------------V 636
E + K L+ G + + +N +
Sbjct: 327 EEAVKVKDEMVGFGIPMSVIAATSLITGFCNGNELGKALDFFNRMEEEGLAPDKVMFSVM 386
Query: 637 IHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTG 674
I +FCK M+ A + KRM+S+G P++ H M+ G
Sbjct: 387 IEWFCKNMEMEKAVEIYKRMKSVGIAPSSVLVHKMIQG 424
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 52/251 (20%), Positives = 105/251 (41%), Gaps = 12/251 (4%)
Query: 447 LQPTEKIYIKLVKAFLEAGKT---KELTHFLIKAEKENLQVSHDDAALGHVITLCISLGW 503
+ E IY ++ + G+T KE+ LIK ++ ++ + + +I G
Sbjct: 550 FEANEVIYNTIINGLCKVGQTSKAKEMLQNLIKEKRYSMGCT----SYNSIIDGFFKEGD 605
Query: 504 LDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEA 563
D A + EM G+ + + SL+ + ++NR ++ + +S ++LD Y A
Sbjct: 606 TDSAVEAYREMSENGISPNVVTFTSLINGFCKSNRMDLALEMIHEMKSKDLKLDVPAYGA 665
Query: 564 LLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQE-VKE 622
L+ + D A LF E+ E + + L+ G + L ++ V +
Sbjct: 666 LIDGFCKKNDMKTAYTLFSELLELGL-MPNVSVYNNLISGFRNLGKMDAAIDLYKKMVND 724
Query: 623 GQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKY 682
G I C + + +I K + A + +LG +P+ + +V G + G++
Sbjct: 725 G--ISCDLFTYTTMIDGLLKDGNLILASDLYSELLALGIVPDEILYVVLVNGLSK-KGQF 781
Query: 683 TEVTELWGEMK 693
+++ EMK
Sbjct: 782 VRASKMLEEMK 792
Score = 39.7 bits (91), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 43/206 (20%), Positives = 81/206 (39%), Gaps = 11/206 (5%)
Query: 474 LIKAEKENLQVSHDDAALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAY 533
L++ +E V VI C+ G +++A + DEM G+ S SL+ +
Sbjct: 296 LLREMREKGGVPASQETYTSVIVACVKEGNMEEAVKVKDEMVGFGIPMSVIAATSLITGF 355
Query: 534 IEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSG 593
N + G+ D + +++ + A+ ++K MK I S
Sbjct: 356 CNGNELGKALDFFNRMEEEGLAPDKVMFSVMIEWFCKNMEMEKAVEIYKRMKSVGIAPSS 415
Query: 594 HQEFEMLVKGC--AQNHEAGLMAKLLQEVKEGQRIDCGVHDW--NNVIHFFCKKRLMQDA 649
+M ++GC A++ EA L E+ H + N + CK+ + A
Sbjct: 416 VLVHKM-IQGCLKAESPEAAL------EIFNDSFETWIAHGFMCNKIFLLLCKQGKVDAA 468
Query: 650 EKALKRMRSLGHLPNAQTFHSMVTGY 675
L+ M + G PN +++M+ +
Sbjct: 469 TSFLRMMENKGIEPNVVFYNNMMLAH 494
>gi|297739643|emb|CBI29825.3| unnamed protein product [Vitis vinifera]
Length = 722
Score = 58.5 bits (140), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/240 (23%), Positives = 99/240 (41%), Gaps = 9/240 (3%)
Query: 442 TEHGILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISL 501
T+ GI P IY ++ +A +T ++ H L+ K + D ++ L
Sbjct: 228 TQKGI-PPNTMIYTIILSGLCQAKRTDDV-HRLLNTMKVS-GCCPDSITCNALLDGFCKL 284
Query: 502 GWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCY 561
G +D+A LL G Y+SL+ A R EV R AGI+ D Y
Sbjct: 285 GQIDEAFALLQLFEKEGYVLGIKGYSSLIDGLFRAKRYDEVQEWCRKMFKAGIEPDVVLY 344
Query: 562 EALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVK 621
L++ AL++ +M + + + + L+KG + GL+ K
Sbjct: 345 TILIRGFCEVGMVDYALNMLNDMTQRGLSPDTYC-YNALIKGFC---DVGLLDKARSLQL 400
Query: 622 EGQRIDC--GVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIG 679
E + DC + +I C+ L+ +A + +M +LG P+ TF++++ G G
Sbjct: 401 EISKNDCFPTSCTYTILICGMCRNGLLDEARQIFNQMENLGCSPSIMTFNALIDGLCKAG 460
>gi|224084127|ref|XP_002307219.1| predicted protein [Populus trichocarpa]
gi|222856668|gb|EEE94215.1| predicted protein [Populus trichocarpa]
Length = 584
Score = 58.5 bits (140), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 78/353 (22%), Positives = 151/353 (42%), Gaps = 46/353 (13%)
Query: 415 FVALEAEVKRVLQTL--LGMLQKQVEL---ITTEHGILQPTEKIYIKLVKAFLEAGKTKE 469
FV V +V++ L +G + + VE+ + ++ G++ + L+K F + GK K
Sbjct: 251 FVPDVVTVTKVVEILCNVGRVTEAVEILERVESKGGVVDVVA--HNTLIKGFCKFGKVK- 307
Query: 470 LTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASL 529
L H L+K + + + D + C S G L+ A D+ ++M G+ + + +L
Sbjct: 308 LGHGLLKEMERKGCLPNADTYNALISGFCES-GMLESALDMFNDMKTDGINCNFVTFDTL 366
Query: 530 LKAYIEANRPRE---VTALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKE 586
+K R + + L+ + R S Y ++L + AL +M E
Sbjct: 367 IKGLFSRGRTEDGFKILELMEETRGV-CGGSISPYNSVLYGLYRKNMLNEALEFLMKM-E 424
Query: 587 SKIPRSGHQEFEMLV---KGCAQ---------NHEAGLMAKLLQEVKEGQRIDCGVHDWN 634
+ PR+ + +L +G Q N+E G+ + L+ DC
Sbjct: 425 NLFPRAVDRSLRILGFCEEGAIQEAKRVYDQMNNEGGIPSALVY--------DC------ 470
Query: 635 NVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEMKS 694
+IH FC++ +++A + + M LG+ P A TF+++++G+ + GK +L +M
Sbjct: 471 -LIHGFCQEGCVREALELMNEMVFLGYFPVASTFNALISGFCRL-GKDGSALKLLEDMVG 528
Query: 695 FASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFIDKYKYRTLF 747
L+D++ R F +A ++ M E + D + +LF
Sbjct: 529 RGCVPDTGSYSPLIDAL----CRKKSFQKAASLLLQMVENGITPDYLIWNSLF 577
>gi|242093812|ref|XP_002437396.1| hypothetical protein SORBIDRAFT_10g026180 [Sorghum bicolor]
gi|241915619|gb|EER88763.1| hypothetical protein SORBIDRAFT_10g026180 [Sorghum bicolor]
Length = 786
Score = 58.5 bits (140), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 95/216 (43%), Gaps = 3/216 (1%)
Query: 494 VITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAG 553
++ +C G D +L+ M GV S Y +L+ AY + + SAG
Sbjct: 425 MLAVCGKRGMEDYVTRVLEGMKSCGVELSRDTYNTLIAAYGRCGSRTNAFKMYNEMTSAG 484
Query: 554 IQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLM 613
+ Y ALL Q D A + +M+ +K + Q + +L++ A+ +
Sbjct: 485 FAPCLTTYNALLNVLSRQGDWSTAQSIVSKMR-TKGFKPNDQSYSLLLQCYAKGGNIAGI 543
Query: 614 AKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVT 673
+ +EV G V VI F K R + EKA + +++ G+ P+ F+SM++
Sbjct: 544 DAIEKEVYGGTVFPSWVILRTLVIANF-KCRRLGGIEKAFQEVKARGYNPDLVIFNSMLS 602
Query: 674 GYAAIGGKYTEVTELWGEMKSFASSTSMNFDEELLD 709
YA G Y++VTE++ +K S + L+D
Sbjct: 603 MYAK-NGMYSKVTEIFDSIKQSGLSPDLITYNSLMD 637
Score = 56.2 bits (134), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 102/236 (43%), Gaps = 22/236 (9%)
Query: 502 GWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANR--PREVTALLRDARSAGIQLDAS 559
G ++A +L E+ GV + Y +L Y R PR + ALL + R+AG++ D
Sbjct: 187 GRYERAVELFAELRRQGVAPTLVTYNVVLDVYGRMGRSWPR-IVALLDEMRAAGVEPDDF 245
Query: 560 CYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNH-EAGLMAKLLQ 618
++ + A+ F+++K GH + Q +AG + L+
Sbjct: 246 TASTVIAACCRDGLVDEAVAFFEDLKAR-----GHTPCVVTYNALLQVFGKAGNYTEALR 300
Query: 619 EVKEGQRIDC--GVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYA 676
+KE ++ C +N + + + ++A K L M S G LPNA T+++++T Y
Sbjct: 301 VLKEMEQDGCQPDAVTYNELAGTYARAGFYEEAAKCLDTMTSKGLLPNAFTYNTVMTAYG 360
Query: 677 AIGGKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMME 732
I GK E L+ +MK ++N Y F+ G + + M+E
Sbjct: 361 NI-GKVDEALALFDQMKKSGCVPNVN---------TYNFIL-GMLGKKSRFTVMLE 405
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 80/181 (44%), Gaps = 40/181 (22%)
Query: 498 CISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLD 557
C LG +++A E+ G ++ S+L Y + +VT + + +G+ D
Sbjct: 572 CRRLGGIEKA---FQEVKARGYNPDLVIFNSMLSMYAKNGMYSKVTEIFDSIKQSGLSPD 628
Query: 558 ASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLL 617
Y +L+ +M K C+++ EA K+L
Sbjct: 629 LITYNSLM--------------------------------DMYAK-CSESWEA---EKIL 652
Query: 618 QEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAA 677
++K Q + V +N VI+ FCK+ L+++A++ L M + G P T+H++V GYA+
Sbjct: 653 NQLKSSQ-VKPDVVSYNTVINGFCKQGLIKEAQRILSEMIADGMAPCVVTYHTLVGGYAS 711
Query: 678 I 678
+
Sbjct: 712 L 712
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 78/363 (21%), Positives = 135/363 (37%), Gaps = 54/363 (14%)
Query: 431 GMLQKQVELITT--EHGILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDD 488
G ++ VEL G+ PT Y ++ + G++ L+ E V DD
Sbjct: 187 GRYERAVELFAELRRQGV-APTLVTYNVVLDVYGRMGRSWPRIVALLD-EMRAAGVEPDD 244
Query: 489 AALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRD 548
VI C G +D+A +++ G Y +LL+ + +A E +L++
Sbjct: 245 FTASTVIAACCRDGLVDEAVAFFEDLKARGHTPCVVTYNALLQVFGKAGNYTEALRVLKE 304
Query: 549 ARSAGIQLDASCYEAL----------------LQSKIVQKDTPGA--------------- 577
G Q DA Y L L + + P A
Sbjct: 305 MEQDGCQPDAVTYNELAGTYARAGFYEEAAKCLDTMTSKGLLPNAFTYNTVMTAYGNIGK 364
Query: 578 ----LHLFKEMKESK-IPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRIDCGVH- 631
L LF +MK+S +P F + + G + +L+ + E R C +
Sbjct: 365 VDEALALFDQMKKSGCVPNVNTYNFILGMLG-----KKSRFTVMLEMLGEMSRSGCTPNR 419
Query: 632 -DWNNVIHFFCKKRLMQD-AEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELW 689
WN ++ C KR M+D + L+ M+S G + T+++++ Y G + T +++
Sbjct: 420 VTWNTMLAV-CGKRGMEDYVTRVLEGMKSCGVELSRDTYNTLIAAYGRCGSR-TNAFKMY 477
Query: 690 GEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFIDKYKYRTLFLK 749
EM S + + LL+ R G ++ A +V+ M + Y L
Sbjct: 478 NEMTSAGFAPCLTTYNALLN----VLSRQGDWSTAQSIVSKMRTKGFKPNDQSYSLLLQC 533
Query: 750 YHK 752
Y K
Sbjct: 534 YAK 536
>gi|356519580|ref|XP_003528450.1| PREDICTED: pentatricopeptide repeat-containing protein At5g14770,
mitochondrial-like [Glycine max]
Length = 1012
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 79/417 (18%), Positives = 172/417 (41%), Gaps = 25/417 (5%)
Query: 350 LEMLQRAKEARNSLAAAMLPFNAVGVNNRTPSEQNVN-CTNSVDLENSGI---IENHILS 405
+ ++Q A+ +L +P +A+G+N V + ++DL G ++ I++
Sbjct: 123 IGLVQYAEWIMGNLVGGGVPLDAIGLNTLVDGYCEVGLVSRALDLVEDGWKNGVKPDIVT 182
Query: 406 YEDFTKDRKFVALEAEVKRVLQTLLGMLQKQVELITTEHGI--------LQPTEKIYIKL 457
Y A+ + V+ +LG + + + G+ LQPT + L
Sbjct: 183 YNTLVNAFCKRGDLAKAESVVNEILGFRRDDESGVLNDCGVETWDGLRDLQPTVVTWTTL 242
Query: 458 VKAFLEAGKTKELTHFLIKAEKENLQ-VSHDDAALGHVITLCISLGWLDQAHDLLDEMHL 516
+ A+ K + + F E+ + V D ++ G L +A LL EM+
Sbjct: 243 IAAYC---KHRGIDDFFSLYEQMIMSGVMPDVVTCSSILYGLCRHGKLTEAAMLLREMYN 299
Query: 517 AGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQKDTPG 576
G+ + Y +++ A +++ R E GI +D ++ +
Sbjct: 300 MGLDPNHVSYTTIISALLKSGRVMEAFNHQSQMVVRGISIDLVLCTTMMDGLFKAGKSKE 359
Query: 577 ALHLFKE-MKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRIDCGVHDWNN 635
A +F+ +K + +P + L+ G + + +LQ++ E + + V +++
Sbjct: 360 AEEMFQTILKLNLVPNC--VTYTALLDGHCKVGDVEFAETVLQKM-EKEHVLPNVVTFSS 416
Query: 636 VIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEMKSF 695
+I+ + KK ++ A + L++M + +PN + ++ GY G++ + EMKS+
Sbjct: 417 IINGYAKKGMLNKAVEVLRKMVQMNIMPNVFVYAILLDGYFRT-GQHEAAAGFYKEMKSW 475
Query: 696 ASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFIDKYKYRTLFLKYHK 752
+ + + D +L R G A ++ + +++D + Y +L Y K
Sbjct: 476 G----LEENNIIFDILLNNLKRSGGMKEAQSLIKDILSKGIYLDVFNYSSLMDGYFK 528
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 59/257 (22%), Positives = 107/257 (41%), Gaps = 9/257 (3%)
Query: 447 LQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQ 506
L P Y ++ + GKT+ L E ++ V + +I G +++
Sbjct: 581 LTPDCVTYNSVMNTYFIQGKTENALDLL--NEMKSYGVMPNMVTYNILIGGLCKTGAIEK 638
Query: 507 AHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQ 566
+L EM G + ++ LLKAY + + + + + G+ L+ Y L+
Sbjct: 639 VISVLHEMLAVGYVPTPIIHKFLLKAYSRSRKADAILQIHKKLVDMGLNLNQMVYNTLIT 698
Query: 567 SKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKG-CAQNHEAGLMAKLLQEVKEGQR 625
T A + EM I + + L++G C +H Q + G
Sbjct: 699 VLCRLGMTKKANVVLTEMVIKGIS-ADIVTYNALIRGYCTGSHVEKAFNTYSQMLVSG-- 755
Query: 626 IDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEV 685
I + +N ++ LM+DA+K + MR G +PNA T++ +V+G+ +G K +
Sbjct: 756 ISPNITTYNALLEGLSTNGLMRDADKLVSEMRERGLVPNATTYNILVSGHGRVGNKRDSI 815
Query: 686 TELWGEM--KSFASSTS 700
+L+ EM K F +T
Sbjct: 816 -KLYCEMITKGFIPTTG 831
Score = 40.8 bits (94), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 48/211 (22%), Positives = 79/211 (37%), Gaps = 22/211 (10%)
Query: 502 GWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCY 561
G DQ LL EM GV S L+K Y + + ++ + G+ LDA
Sbjct: 89 GLADQGFGLLSEMVKKGVCFDSVTCNILVKGYCQIGLVQYAEWIMGNLVGGGVPLDAIGL 148
Query: 562 EALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEV- 620
L+ AL L ++ ++ + + + LV + + ++ E+
Sbjct: 149 NTLVDGYCEVGLVSRALDLVEDGWKNGV-KPDIVTYNTLVNAFCKRGDLAKAESVVNEIL 207
Query: 621 ------KEGQRIDCGVHDWN-------------NVIHFFCKKRLMQDAEKALKRMRSLGH 661
+ G DCGV W+ +I +CK R + D ++M G
Sbjct: 208 GFRRDDESGVLNDCGVETWDGLRDLQPTVVTWTTLIAAYCKHRGIDDFFSLYEQMIMSGV 267
Query: 662 LPNAQTFHSMVTGYAAIGGKYTEVTELWGEM 692
+P+ T S++ G GK TE L EM
Sbjct: 268 MPDVVTCSSILYGLCR-HGKLTEAAMLLREM 297
>gi|168002263|ref|XP_001753833.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162694809|gb|EDQ81155.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 779
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 103/496 (20%), Positives = 191/496 (38%), Gaps = 60/496 (12%)
Query: 270 RKAEQLLDIMPR-IGVKADSNLLIIMAHIYERNGRREELRKLQRHIDEAVNLSDIQFRQF 328
+KA +L M R K + ++ IM I R G ++ +L E + L+D+++ +
Sbjct: 55 QKALRLFKYMQRHQWCKPNEHVYTIMIGIMGREGMLDKASELF----EDMPLNDVEWNVY 110
Query: 329 -YNCLLSCHLKFGDLNSASKMVLEMLQRAKEARNSLAAAMLPFNAVGVNNRTPSEQNVNC 387
+ L++ + + N + L +L R K R + ++ +N V +N
Sbjct: 111 SFTALINAYGR----NGQHEASLHLLARMK--REKVTPNLITYNTV-----------INA 153
Query: 388 TNSVDLENSGI-----------IENHILSYEDFTKDRKFVALEAEVKRVLQTLLGMLQKQ 436
LE G+ I+ I++Y L E V +T+
Sbjct: 154 CAKGGLEWEGLLGLFAQMRHEGIQPDIITYNTLLSACSSRGLVEEAGMVFRTM------- 206
Query: 437 VELITTEHGILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVIT 496
E G++ P Y LV + +A + + + L E E + D A +I
Sbjct: 207 -----NEAGVV-PDSITYNALVDIYGQADRHEGVGELL--REMEQAGNAPDVVAYNILIE 258
Query: 497 LCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQL 556
G A + +M AG +++LL+AY + EV L D + G +
Sbjct: 259 AYGRAGKYRAAAKMFKQMQEAGCTPDVVTFSTLLEAYGKHGCYDEVRLLFTDMKERGTEP 318
Query: 557 DASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQN--HEAGLMA 614
D + Y L+Q +++LF ++ + + + L+ C + H+A A
Sbjct: 319 DVNTYNTLIQVFGQGGFFQESINLFWDLLDGGV-EPDMSTYAGLLYSCGKGGLHKA---A 374
Query: 615 KLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTG 674
K + + + +I + L +A A M+ G P+ +T+++++
Sbjct: 375 KKIHRHMLQSYVTPTTDGFTGLITAYGNAALYSEATYAFNSMKESGCKPDLETYNALIGA 434
Query: 675 YAAIGGKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEG 734
+A GG Y E + M ++ D +S++ F RGG F A E MEE
Sbjct: 435 HAG-GGLYCEAGSAYLTM----IDEGISADVSTYNSLIEAFGRGGLFDDAIEFSRDMEEA 489
Query: 735 KMFIDKYKYRTLFLKY 750
+ +++ Y L Y
Sbjct: 490 RCSPNRHTYEALMGVY 505
>gi|357449185|ref|XP_003594869.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355483917|gb|AES65120.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 545
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/251 (21%), Positives = 105/251 (41%), Gaps = 11/251 (4%)
Query: 447 LQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQ---VSHDDAALGHVITLCISLGW 503
+ P + L+ F + GK +E + L K+N++ V+++ G+ + +
Sbjct: 264 INPNVYTFSILIDGFCKEGKVREAKNVLAVMMKKNVKLDVVTYNSLMDGYCL-----VKQ 318
Query: 504 LDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEA 563
+++A L + M GV Y+ ++ + + E L + I + Y +
Sbjct: 319 VNKAKSLFNVMAQRGVTPDVWSYSIMINGFCKIKMVDEAMKLFEEMHCKQIFPNVVTYNS 378
Query: 564 LLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEG 623
L+ T AL L EM + P + +L C NH + LL ++KE
Sbjct: 379 LVDGLCKSGRTSCALELVDEMHDRGQPSNIITYNSILDAICKNNHVDKAIV-LLTKIKE- 436
Query: 624 QRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYT 683
+ I + + +I+ CK + DA+K + + G+ PN T+ S++ G+ G +
Sbjct: 437 KGIQPDIFTYTVLINGLCKVGRLDDAQKVFEDLLVKGYSPNIYTYTSLINGFCN-KGFFD 495
Query: 684 EVTELWGEMKS 694
E + +MK
Sbjct: 496 EGLAMLSKMKD 506
Score = 46.6 bits (109), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 69/176 (39%), Gaps = 38/176 (21%)
Query: 497 LCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQL 556
LC S G A +L+DEMH G ++ Y S+L A + N + LL + GIQ
Sbjct: 383 LCKS-GRTSCALELVDEMHDRGQPSNIITYNSILDAICKNNHVDKAIVLLTKIKEKGIQP 441
Query: 557 DASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKL 616
D Y L+ A +F+ ++LVKG + N
Sbjct: 442 DIFTYTVLINGLCKVGRLDDAQKVFE---------------DLLVKGYSPN--------- 477
Query: 617 LQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMV 672
++ + ++I+ FC K + L +M+ G +PNA T+ ++
Sbjct: 478 -------------IYTYTSLINGFCNKGFFDEGLAMLSKMKDNGCIPNAITYEILI 520
Score = 45.8 bits (107), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 61/298 (20%), Positives = 117/298 (39%), Gaps = 38/298 (12%)
Query: 448 QPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQA 507
P + L+K G+ + +F K + Q+ D + G +I +G A
Sbjct: 125 HPDAVTFTILIKGLCLKGEVHKALYFHDKVVAQGFQL--DQVSYGTLINGLCRVGETKAA 182
Query: 508 HDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQS 567
LL + VR + +Y++++ + + + L + S I D Y +L+
Sbjct: 183 VQLLRRVDGKLVRPNVVMYSTIIDSMCKDKLVNDAFDLYCEMVSKRISPDVVTYSSLISG 242
Query: 568 KIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKG-C-------AQNHEAGLMAK---- 615
V A+ LF M I + + F +L+ G C A+N A +M K
Sbjct: 243 FCVVGKLKYAVDLFNRMISDNINPNVYT-FSILIDGFCKEGKVREAKNVLAVMMKKNVKL 301
Query: 616 -------------LLQEVKEGQR---------IDCGVHDWNNVIHFFCKKRLMQDAEKAL 653
L+++V + + + V ++ +I+ FCK +++ +A K
Sbjct: 302 DVVTYNSLMDGYCLVKQVNKAKSLFNVMAQRGVTPDVWSYSIMINGFCKIKMVDEAMKLF 361
Query: 654 KRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEMKSFASSTSMNFDEELLDSV 711
+ M PN T++S+V G G+ + EL EM +++ +LD++
Sbjct: 362 EEMHCKQIFPNVVTYNSLVDGLCK-SGRTSCALELVDEMHDRGQPSNIITYNSILDAI 418
>gi|414884149|tpg|DAA60163.1| TPA: hypothetical protein ZEAMMB73_830458 [Zea mays]
Length = 378
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/226 (22%), Positives = 104/226 (46%), Gaps = 10/226 (4%)
Query: 452 KIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSH---DDAALGHVITLCISLGWLDQAH 508
+ Y +V F ++GK + L E ++V H A G +I + LD+A+
Sbjct: 95 RAYNAVVDGFCKSGKVDKAYEAL-----EEMKVKHVPPTVATYGSIIDGLAKIDRLDEAY 149
Query: 509 DLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSK 568
L +E G+ + VY+SL+ + + R E +L + G+ + + +L+ +
Sbjct: 150 MLFEEAKSKGIELNVIVYSSLIDGFGKVGRIDEAYLILEEMMKKGLAPNVYTWNSLMDAL 209
Query: 569 IVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRIDC 628
+ ++ AL F+ MKE K + + + +L+ G + + QE+++ Q +
Sbjct: 210 VKAEEINEALICFQSMKEMKCSPNTYT-YSILINGLCRVQKYNKAFVFWQEMQK-QGLVP 267
Query: 629 GVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTG 674
V + +I K + DA +R ++ G +P+A +F++++ G
Sbjct: 268 NVVTYTTMISGLAKVGNITDACSLFERFKANGGIPDAASFNALIEG 313
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 58/254 (22%), Positives = 118/254 (46%), Gaps = 12/254 (4%)
Query: 444 HGILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGW 503
+G L P + Y L+ +AG+ +E + ++ + D A V+ G
Sbjct: 53 YGFL-PDVRSYSILIHGLTKAGQARETSSIFHAMKQRGFAL--DARAYNAVVDGFCKSGK 109
Query: 504 LDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEA 563
+D+A++ L+EM + V + + Y S++ + +R E L +A+S GI+L+ Y +
Sbjct: 110 VDKAYEALEEMKVKHVPPTVATYGSIIDGLAKIDRLDEAYMLFEEAKSKGIELNVIVYSS 169
Query: 564 LLQS-KIVQKDTPGALHLFKEMKESKIPR--SGHQEFEMLVKGCAQNHEAGLMAKLLQEV 620
L+ V + L L + MK+ P + + + LVK + +EA + + ++E+
Sbjct: 170 LIDGFGKVGRIDEAYLILEEMMKKGLAPNVYTWNSLMDALVKA-EEINEALICFQSMKEM 228
Query: 621 KEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGG 680
K + ++ +I+ C+ + A + M+ G +PN T+ +M++G A + G
Sbjct: 229 K----CSPNTYTYSILINGLCRVQKYNKAFVFWQEMQKQGLVPNVVTYTTMISGLAKV-G 283
Query: 681 KYTEVTELWGEMKS 694
T+ L+ K+
Sbjct: 284 NITDACSLFERFKA 297
Score = 41.6 bits (96), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 36/171 (21%), Positives = 74/171 (43%), Gaps = 2/171 (1%)
Query: 502 GWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCY 561
G +++ + +++ G Y+ L+ +A + RE +++ + G LDA Y
Sbjct: 38 GDVEKGRAIFEDIKGYGFLPDVRSYSILIHGLTKAGQARETSSIFHAMKQRGFALDARAY 97
Query: 562 EALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVK 621
A++ A +EMK +P + + ++ G A+ L +E K
Sbjct: 98 NAVVDGFCKSGKVDKAYEALEEMKVKHVPPT-VATYGSIIDGLAKIDRLDEAYMLFEEAK 156
Query: 622 EGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMV 672
+ I+ V ++++I F K + +A L+ M G PN T++S++
Sbjct: 157 S-KGIELNVIVYSSLIDGFGKVGRIDEAYLILEEMMKKGLAPNVYTWNSLM 206
>gi|242054609|ref|XP_002456450.1| hypothetical protein SORBIDRAFT_03g036550 [Sorghum bicolor]
gi|241928425|gb|EES01570.1| hypothetical protein SORBIDRAFT_03g036550 [Sorghum bicolor]
Length = 669
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 65/309 (21%), Positives = 118/309 (38%), Gaps = 27/309 (8%)
Query: 447 LQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVIT-------LCI 499
+ P Y L++ + G+ + L + Q +V+T +C
Sbjct: 139 VAPDAYTYTPLIRVLCDRGRVADALSLLDDMLRRGCQ--------PNVVTYTVLLEAMCR 190
Query: 500 SLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDAS 559
+ G+ +QA +LDEM G + Y ++ R + LL S G Q D
Sbjct: 191 NSGF-EQAMAVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDARELLNRLPSYGFQPDTV 249
Query: 560 CYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQE 619
Y LL+ K LF EM E F+ML++ + G++ + +Q
Sbjct: 250 SYTTLLKGLCASKRWDDVEELFAEMMEKNC-MPNEVTFDMLIRFFCR---GGMVERAIQV 305
Query: 620 VKEGQRIDCGVHD--WNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAA 677
+++ C + N VI+ CK+ + DA K L M S G P+ ++ +++ G
Sbjct: 306 LEQMTEHGCATNTTLCNIVINSICKQGRVDDAFKLLNDMGSYGCNPDTISYTTVLKGLCR 365
Query: 678 IGGKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMF 737
++ + EL EM + +E ++ + + G +A ++ M E
Sbjct: 366 -AERWDDAKELLNEM----VRNNCPPNEVTFNTFICILCQKGLIEQAIMLIEQMSEHGCT 420
Query: 738 IDKYKYRTL 746
+ Y L
Sbjct: 421 VGVVTYNAL 429
Score = 55.8 bits (133), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 54/249 (21%), Positives = 108/249 (43%), Gaps = 16/249 (6%)
Query: 431 GMLQKQVELI--TTEHGILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDD 488
GM+++ ++++ TEHG T I ++ + + G+ + F + + + + D
Sbjct: 297 GMVERAIQVLEQMTEHGCATNTTLCNI-VINSICKQGRVDD--AFKLLNDMGSYGCNPDT 353
Query: 489 AALGHVIT-LCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLR 547
+ V+ LC + W D A +LL+EM + + + + + + L+
Sbjct: 354 ISYTTVLKGLCRAERW-DDAKELLNEMVRNNCPPNEVTFNTFICILCQKGLIEQAIMLIE 412
Query: 548 DARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQN 607
G + Y AL+ VQ AL LF+ M + + L+ G
Sbjct: 413 QMSEHGCTVGVVTYNALVNGFCVQGHIDSALELFRSMP----CKPNTITYTTLLTGLCNA 468
Query: 608 HEAGLMAKLLQEVKEGQRIDC--GVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNA 665
A+L+ E+ G DC V +N ++ FFC+K +++A + +++M G PN
Sbjct: 469 ERLDGAAELVAEMLRG---DCPPNVVTFNVLVSFFCQKGFLEEAIELVEQMMEHGCTPNL 525
Query: 666 QTFHSMVTG 674
T+++++ G
Sbjct: 526 ITYNTLLDG 534
>gi|302760809|ref|XP_002963827.1| hypothetical protein SELMODRAFT_79421 [Selaginella moellendorffii]
gi|300169095|gb|EFJ35698.1| hypothetical protein SELMODRAFT_79421 [Selaginella moellendorffii]
Length = 616
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 77/330 (23%), Positives = 140/330 (42%), Gaps = 35/330 (10%)
Query: 431 GMLQKQVELI---TTEHGILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHD 487
G L+K EL+ + G P Y L+ AF A + +E F + + + ++ D
Sbjct: 146 GNLEKARELLEEMIRKGGKSAPDIVTYNTLINAFYRASRIREACAF--REKMKAAGINPD 203
Query: 488 DAALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLR 547
+++ G +++A ++LD M LAG Y S++ A A + E +L+
Sbjct: 204 VLTCNILVSGICKDGDVEEALEILDGMKLAGPVPDVITYNSIIHALCVAGKVVEAAEILK 263
Query: 548 ------DARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEM-KESKIPRSGHQEFEML 600
D + LD C +L P AL + +EM +E+ +P + +L
Sbjct: 264 TMSCSPDLVTFNTLLDGFCKAGML---------PRALEVLEEMCRENILPDV--ITYTIL 312
Query: 601 VKGCAQNHEAGLMAKLLQE-VKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSL 659
V G + + + LL+E V++G D V + +++ CK +++A K +K M
Sbjct: 313 VNGLCRVGQVQVAFYLLEEIVRQGYIPD--VIAYTSLVDGLCKSGEIEEAHKLVKEMSVR 370
Query: 660 GHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEMKSFASSTSMNFDEELL--DSVLYTFVR 717
G + S+V+GY G + + E+ EM S+N L + VL ++
Sbjct: 371 GCRTGVVMYSSLVSGYCRAGNVH-KAREILAEM------VSINMVPPLFTYNIVLGGLIK 423
Query: 718 GGFFARANEVVAMMEEGKMFIDKYKYRTLF 747
G ++A +++ + D Y TL
Sbjct: 424 DGSISKAVSLISDLVARGYVPDVVTYNTLI 453
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 85/187 (45%), Gaps = 12/187 (6%)
Query: 497 LCISLGWLDQAHDLLDEMHLAGVRASSSV--YASLLKAYIEANRPREVTALLRDARSAGI 554
LC S G L++A +LL+EM G +++ + Y +L+ A+ A+R RE A ++AGI
Sbjct: 142 LCKS-GNLEKARELLEEMIRKGGKSAPDIVTYNTLINAFYRASRIREACAFREKMKAAGI 200
Query: 555 QLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMA 614
D L+ D AL + MK + P + ++ H +
Sbjct: 201 NPDVLTCNILVSGICKDGDVEEALEILDGMKLAG-PVPDVITYNSII------HALCVAG 253
Query: 615 KLLQEVKEGQRIDCG--VHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMV 672
K+++ + + + C + +N ++ FCK ++ A + L+ M LP+ T+ +V
Sbjct: 254 KVVEAAEILKTMSCSPDLVTFNTLLDGFCKAGMLPRALEVLEEMCRENILPDVITYTILV 313
Query: 673 TGYAAIG 679
G +G
Sbjct: 314 NGLCRVG 320
Score = 48.9 bits (115), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 113/581 (19%), Positives = 213/581 (36%), Gaps = 81/581 (13%)
Query: 251 PNTNTFNIALAGCLLFETTRKAEQLLDIMPRIGVKADSNLLIIMAHIYERNGRREELRKL 310
PN TF I + G +A + L + V D + ++ H ++G ++ KL
Sbjct: 60 PNLVTFKILIRGNCKAGQAMRALEFLRALDEFSVAPDVYIFNVLIHGLFKDGNPDQAVKL 119
Query: 311 QRHIDEAVNLSDIQFRQFYNCLLSCHLKFGDLNSASKMVLEMLQRAKEARNSLAAAMLPF 370
+++ + +I YN ++S K G+L A +++ EM+++ ++ A ++ +
Sbjct: 120 FENMESSRVKPEI---VTYNTVISGLCKSGNLEKARELLEEMIRKGGKS----APDIVTY 172
Query: 371 NAVGVNNRTPSEQNVNCTNSVDLENSGIIENHILSYEDFTKDRKFVALEAEVKRVLQTLL 430
N + S C ++ +G I +L+ + + +V+ L+ L
Sbjct: 173 NTLINAFYRASRIREACAFREKMKAAG-INPDVLTCNILVSG---ICKDGDVEEALEILD 228
Query: 431 GM-LQKQVELITTEHGILQ---------------------PTEKIYIKLVKAFLEAGKTK 468
GM L V + T + I+ P + L+ F +AG
Sbjct: 229 GMKLAGPVPDVITYNSIIHALCVAGKVVEAAEILKTMSCSPDLVTFNTLLDGFCKAGMLP 288
Query: 469 ELTHFLIKAEKENLQVSHDDAALGHVITLCI------SLGWLDQAHDLLDEMHLAGVRAS 522
L + +EN+ L VIT I +G + A LL+E+ G
Sbjct: 289 RALEVLEEMCRENI--------LPDVITYTILVNGLCRVGQVQVAFYLLEEIVRQGYIPD 340
Query: 523 SSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFK 582
Y SL+ ++ E L+++ G + Y +L+ + A +
Sbjct: 341 VIAYTSLVDGLCKSGEIEEAHKLVKEMSVRGCRTGVVMYSSLVSGYCRAGNVHKAREILA 400
Query: 583 EMKE-SKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQE-VKEGQRIDCGVHDWNNVIHFF 640
EM + +P + +++ G ++ L+ + V G D V +N +I
Sbjct: 401 EMVSINMVPP--LFTYNIVLGGLIKDGSISKAVSLISDLVARGYVPD--VVTYNTLIDGL 456
Query: 641 CKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEMKSFASSTS 700
CK +++A M S G PN T S+V G +G V + W +
Sbjct: 457 CKANRVREACDLADEMASRGCFPNDVTLGSVVFGLCRVG----RVDDAWSLV------VE 506
Query: 701 MNFDEELLDSVLYTFVRGGF-----FARANEVVAMMEEGKMFIDKYKYRTLFLK------ 749
M+ + V+YT + G A V+ M + +D + YR L +
Sbjct: 507 MSRKRHAPNVVVYTSLIDGLCKSDRMDDACMVLDAMRGQGVALDDFAYRKLIVSMSHGGR 566
Query: 750 -------YHKTLYKGKTPKFQTEAQLKKREAALGFKKWLGL 783
Y + + +G P T L++ + +W L
Sbjct: 567 VAEAMAMYDEMVARGFLPDGSTSKTLEEAAMSNSVFEWTNL 607
>gi|302784330|ref|XP_002973937.1| hypothetical protein SELMODRAFT_100758 [Selaginella moellendorffii]
gi|300158269|gb|EFJ24892.1| hypothetical protein SELMODRAFT_100758 [Selaginella moellendorffii]
Length = 823
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 99/520 (19%), Positives = 210/520 (40%), Gaps = 50/520 (9%)
Query: 247 IAMKPNTNTFNIALAGCLLFETTRKAEQLLDIMPRIGVKADSNLLIIMAHIYERNGRREE 306
+ + P+ T+N + C+ ++A +L M G + + +Y + G +E
Sbjct: 278 LEISPDDYTYNTMITACIQNSHCQEALRLFQEMKEAGCCPNRVTYNALLDVYGKGGMHKE 337
Query: 307 LRKLQRHIDEAVNLSDIQFRQFYNCLLSCHLKFGDLNSASKMVLEMLQRAKEARNSLAAA 366
+L ++ A +I YN L++ + + G + A+ + ++ L+
Sbjct: 338 ASELLVEMEAAGISPNIVT---YNELIAAYARAGLCDEAAAL----------KKSLLSKG 384
Query: 367 MLPFNAVGVNNRTPSEQNVNCTNSVDLENSGIIENHILSYEDFTKDRKFVALEAEVK-RV 425
+ P ++ CT + E + + E FT+ RK V +
Sbjct: 385 LCP------------DEFTYCTLISAFNRA---ERYEKALETFTEMRKTNCTPNIVTYNI 429
Query: 426 LQTLLGMLQKQVELITT----EHGILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKEN 481
L + G ++K +++ + P + L+K+F G E+++ + ++
Sbjct: 430 LIDIYGRMEKLDDMMKVFKFMQEKNCTPDLVTWNSLLKSFGNCGMLTEVSNVFREMKRAG 489
Query: 482 LQVSHDDAALGHVITLCIS-LGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPR 540
D +++ C G++D + D+ + G++ + +A+L+ + R +
Sbjct: 490 YMPGVDTF---NILIECYGRCGYVDYSVDIYKGLLRTGLQPTVPTFAALMASLAREGRWQ 546
Query: 541 EVTALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEM-KESKIPRSG--HQEF 597
+ + ++ AG+QL +C+ L+ S E+ K +K P SG + F
Sbjct: 547 QCEKVSQEMAEAGLQLSDACHAGLIHSYANSGQFFQLRKYIDELEKSAKQPLSGILCKTF 606
Query: 598 EMLVKGCAQNHEAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMR 657
+ C ++EA L L Q G D V +N +I K+ ++ A K L+ +R
Sbjct: 607 VLAYCKCGMDNEAQL--ALNQLYDNGHSPDIKV--FNAMISMCAKRGWIERAVKLLEEIR 662
Query: 658 SLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVR 717
P+ T++ +++ Y G Y + E+ EM+ + ++ +++LY++ +
Sbjct: 663 KAQLKPDGVTYNCLMSMYGR-EGMYYKAEEVMSEMRRAGKAPNLI----TYNTLLYSYTK 717
Query: 718 GGFFARANEVVAMMEEGKMFIDKYKYRTLFLKYHK-TLYK 756
G A V M ++ D + + TL Y LYK
Sbjct: 718 HGRMDDAARVFGDMVAARVRPDNFTFNTLVGSYSSLGLYK 757
Score = 47.8 bits (112), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 70/276 (25%), Positives = 109/276 (39%), Gaps = 29/276 (10%)
Query: 421 EVKRVLQTLLGMLQKQ------VELITTEHGILQPTEKIYIKLVKAFLEAGKTKELTHFL 474
+V +LL + KQ EL+ G L T+ + VKA GK K+
Sbjct: 105 DVSEAAHSLLASISKQEDSSDATELLEFIAGELVLTDSELVYFVKALGRQGKWKKALEVF 164
Query: 475 IKAEKENLQVSHDDAALGHVITLCI--SLGWLDQAHDLL--------DEMHLAGVRASSS 524
K HD L V T I LG +Q L DE + V A
Sbjct: 165 EWIRK------HDCFKLRGVATASILSVLGNHEQLPAALELFESLKQDESYSLDVYA--- 215
Query: 525 VYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALH-LFKE 583
Y SL+ A R E L + G + +A Y +L + D+ + LF+E
Sbjct: 216 -YTSLISILSRARRFDEGITLFETMQREGQRGNAVTYNVMLDLYGKRGDSWDRIQSLFQE 274
Query: 584 MKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKK 643
MK+ +I + + ++ C QN +L QE+KE V +N ++ + K
Sbjct: 275 MKDLEISPDDYT-YNTMITACIQNSHCQEALRLFQEMKEAGCCPNRV-TYNALLDVYGKG 332
Query: 644 RLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIG 679
+ ++A + L M + G PN T++ ++ YA G
Sbjct: 333 GMHKEASELLVEMEAAGISPNIVTYNELIAAYARAG 368
>gi|326489801|dbj|BAK01881.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 788
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 99/213 (46%), Gaps = 13/213 (6%)
Query: 455 IKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQAHDLLDEM 514
I LV + ++G ++ T EKE LQ D +I+ CI+ G QA LL +M
Sbjct: 496 ITLVHMYSKSGNLEQATRAFDFIEKEGLQ--PDTRLFTSMISACINAGVPKQAEKLLKKM 553
Query: 515 HLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQKDT 574
++ S +Y +++AY E N + AGI+ C+ L+++ +
Sbjct: 554 DELSMKPSRELYMDVMRAYAERNLVDGAQMMRTQMSMAGIEPTLECFTLLIEAYGRAGNP 613
Query: 575 PGALHLFKEMKESKIPRSGHQEFEM----LVKGCAQNHEAGLMAKLLQEVKEGQRIDCGV 630
A F++M+ ++GH+ + ++ G + ++ KLL +KEG + GV
Sbjct: 614 DPAYEAFEQMR-----KNGHEPDDRCLAGMMTGLMKTNQLDQALKLLLSLKEG--VKPGV 666
Query: 631 HDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLP 663
++ + +L+Q+AE+ ++++R G P
Sbjct: 667 KTNLVLLDWLSMLQLVQEAEQLVQKIRKAGEEP 699
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 61/268 (22%), Positives = 104/268 (38%), Gaps = 36/268 (13%)
Query: 447 LQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQ 506
LQP +++ ++ A + AG K+ L K ++ +++ S + V+ +D
Sbjct: 523 LQPDTRLFTSMISACINAGVPKQAEKLLKKMDELSMKPSRE--LYMDVMRAYAERNLVDG 580
Query: 507 AHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQ 566
A + +M +AG+ + + L++AY A P R G + D C ++
Sbjct: 581 AQMMRTQMSMAGIEPTLECFTLLIEAYGRAGNPDPAYEAFEQMRKNGHEPDDRCLAGMMT 640
Query: 567 SKIVQKDTPGALHLFKEMKESKIPRSGH--------------QEFEMLVKGCAQNHE--- 609
+ AL L +KE P QE E LV+ + E
Sbjct: 641 GLMKTNQLDQALKLLLSLKEGVKPGVKTNLVLLDWLSMLQLVQEAEQLVQKIRKAGEEPL 700
Query: 610 ------AGLMAKLLQEVK---------EGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALK 654
A + AK QE K E +R+ H + +I + +DA+K K
Sbjct: 701 EIHVYLADMYAKSRQEEKARKSLKILEEKKRLLKADH-FERIIRGLQQGGFWEDAKKYFK 759
Query: 655 RMRSLGHLPNAQTFHSMVTGYAAIGGKY 682
M+S G +P+A T + V G G+Y
Sbjct: 760 MMKSRGFVPSA-TVEAGVRGVVPPAGRY 786
>gi|224130786|ref|XP_002328376.1| predicted protein [Populus trichocarpa]
gi|222838091|gb|EEE76456.1| predicted protein [Populus trichocarpa]
Length = 599
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/187 (24%), Positives = 83/187 (44%), Gaps = 11/187 (5%)
Query: 510 LLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKI 569
L ++M L GV + L+ N ++L GIQ DA + L+ +
Sbjct: 114 LCNQMDLFGVTHNVYSLNILINCLCRLNHVVFAISVLGKMFKLGIQPDAITFNTLINGRC 173
Query: 570 VQKDTPGALHLFKEMKESKIPRSGHQ----EFEMLVKGCAQNHEAGLMAKLLQEVKEGQR 625
++ + A+ LF EM R GHQ + ++ G ++ + +LL++++E +
Sbjct: 174 IEGEIKEAVGLFNEMV-----RRGHQPDVISYSTVINGLCKSGNTSMALQLLRKMEE-KG 227
Query: 626 IDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEV 685
+ + +I CK L+ DA L M G P+ T+ +++ G+ ++ G E
Sbjct: 228 CKPNLVAYTTIIDSLCKDTLVNDAMDLLSEMVDRGIPPDVVTYSTILHGFCSL-GHLNEA 286
Query: 686 TELWGEM 692
T L+ EM
Sbjct: 287 TILFNEM 293
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 96/219 (43%), Gaps = 18/219 (8%)
Query: 504 LDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEA 563
LD+A LL EM + + Y++L++ + RP+E L ++ S+G+ D Y
Sbjct: 388 LDEAKSLLVEMSEKELTPDTVTYSTLMQGLCQVGRPQEALNLFKEMCSSGLLPDLMTYST 447
Query: 564 LLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKE- 622
LL AL L K M+ESKI + +L++G +A L+ KE
Sbjct: 448 LLDGLCKHGHLDEALKLLKSMQESKI-EPDIVLYNILIEGM-------FIAGKLEVAKEL 499
Query: 623 -----GQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAA 677
I + + +I K+ L +A + ++M G LPN+ +++ ++ G+
Sbjct: 500 FSKLFADGIQPTIRTYTIMIKGLLKEGLSDEAYELFRKMEDDGFLPNSCSYNVIIQGFLQ 559
Query: 678 IGGKYTE---VTELWGEMKSFASST-SMNFDEELLDSVL 712
T + E+ G+ S SST M D E D ++
Sbjct: 560 NQDSSTAIRLIDEMVGKRFSADSSTFQMLLDLESRDEII 598
Score = 52.8 bits (125), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 64/302 (21%), Positives = 121/302 (40%), Gaps = 15/302 (4%)
Query: 448 QPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQA 507
QP Y ++ ++G T L K E++ + + A +I ++ A
Sbjct: 194 QPDVISYSTVINGLCKSGNTSMALQLLRKMEEKGCKPNL--VAYTTIIDSLCKDTLVNDA 251
Query: 508 HDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQS 567
DLL EM G+ Y+++L + E T L + + + + L+
Sbjct: 252 MDLLSEMVDRGIPPDVVTYSTILHGFCSLGHLNEATILFNEMVGRNVMPNTVTFTILVDG 311
Query: 568 KIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQ-EVKEGQRI 626
+ A +F+ M + + + + L+ G N++ K+L V +G
Sbjct: 312 LCKEGMVSEARCVFEAMTKKGAEPNAYT-YNALMDGYCLNNQMDEAQKVLDIMVDKG--- 367
Query: 627 DCG--VHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTE 684
C VH +N +I+ +CK+R + +A+ L M P+ T+ +++ G + G+ E
Sbjct: 368 -CAPVVHSYNILINGYCKRRRLDEAKSLLVEMSEKELTPDTVTYSTLMQGLCQV-GRPQE 425
Query: 685 VTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFIDKYKYR 744
L+ EM S + LLD + + G A +++ M+E K+ D Y
Sbjct: 426 ALNLFKEMCSSGLLPDLMTYSTLLDGL----CKHGHLDEALKLLKSMQESKIEPDIVLYN 481
Query: 745 TL 746
L
Sbjct: 482 IL 483
Score = 43.1 bits (100), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 38/179 (21%), Positives = 72/179 (40%), Gaps = 3/179 (1%)
Query: 498 CISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLD 557
CI G + +A L +EM G + Y++++ ++ LLR G + +
Sbjct: 173 CIE-GEIKEAVGLFNEMVRRGHQPDVISYSTVINGLCKSGNTSMALQLLRKMEEKGCKPN 231
Query: 558 ASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLL 617
Y ++ S A+ L EM + IP +L C+ H A +L
Sbjct: 232 LVAYTTIIDSLCKDTLVNDAMDLLSEMVDRGIPPDVVTYSTILHGFCSLGHLNE--ATIL 289
Query: 618 QEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYA 676
G+ + + ++ CK+ ++ +A + M G PNA T+++++ GY
Sbjct: 290 FNEMVGRNVMPNTVTFTILVDGLCKEGMVSEARCVFEAMTKKGAEPNAYTYNALMDGYC 348
>gi|359481971|ref|XP_003632699.1| PREDICTED: pentatricopeptide repeat-containing protein At5g12100,
mitochondrial-like [Vitis vinifera]
Length = 819
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/231 (21%), Positives = 106/231 (45%), Gaps = 10/231 (4%)
Query: 449 PTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQAH 508
P Y L+ + + G+ +E + + + EN++ + ++ +++A
Sbjct: 250 PNRITYNTLIDGYCKVGQLEEAFNIRERMKVENVEPTI--ITFNSLLNGLCRAQMMEEAQ 307
Query: 509 DLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQ-LDASCYEALLQS 567
+L+EM + G Y +L +++ L +A G+Q LD +C LL +
Sbjct: 308 RVLEEMEVYGFVPDRFTYTTLFDGHLKCGNVDASITLSEEAVRKGVQILDYTC-SILLNA 366
Query: 568 KIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRID 627
+ + A + K+ E+ + G F +V G Q G + K +++ + +
Sbjct: 367 LCKEGNMEKAEEVLKKFLENGLAPVG-VFFNTIVNGYCQ---VGDINKAYTTIEKMEAVG 422
Query: 628 CGVH--DWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYA 676
+ +N+++ FC+ + M++AEK +K+M G LPN +T+++++ GY
Sbjct: 423 LRPNHVTYNSLVKKFCEMKNMEEAEKCIKKMVEKGVLPNVETYNTLIDGYG 473
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 90/220 (40%), Gaps = 9/220 (4%)
Query: 529 LLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESK 588
LL E+ E L + G+ + L+S + K L LF E+ ES
Sbjct: 118 LLSICSESKMVSESAELYMLMKKDGVLPSVASLNLFLESLVSTKRYEDTLQLFSEIVESG 177
Query: 589 IPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQD 648
+ R + ++ + + +L+ +K G + GV +N VI CK++ M+D
Sbjct: 178 L-RPDQFMYGKAIQAAVKLGDLKRAIELMTCMKRGG-VSPGVFVYNVVIGGLCKEKRMKD 235
Query: 649 AEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEMK-SFASSTSMNFDEEL 707
AEK M PN T+++++ GY + G+ E + MK T + F
Sbjct: 236 AEKLFDEMLDRRVAPNRITYNTLIDGYCKV-GQLEEAFNIRERMKVENVEPTIITF---- 290
Query: 708 LDSVLYTFVRGGFFARANEVVAMMEEGKMFIDKYKYRTLF 747
+S+L R A V+ ME D++ Y TLF
Sbjct: 291 -NSLLNGLCRAQMMEEAQRVLEEMEVYGFVPDRFTYTTLF 329
Score = 42.7 bits (99), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 103/575 (17%), Positives = 208/575 (36%), Gaps = 104/575 (18%)
Query: 213 TAPGAYLAAELILEIGYLFQDGRVDPRKKCNAPLIAMK--PNTNTFNIALAGCLLFETTR 270
+PG ++ +I G L ++ R+ +K ++ + PN T+N + G +
Sbjct: 213 VSPGVFVYNVVI---GGLCKEKRMKDAEKLFDEMLDRRVAPNRITYNTLIDG---YCKVG 266
Query: 271 KAEQLLDIMPRIGVKADSNLLIIMAHIYERNGRREELRKLQRHIDEAVNLSDIQFRQFYN 330
+ E+ +I R+ V+ +I + R + + + QR ++E + R Y
Sbjct: 267 QLEEAFNIRERMKVENVEPTIITFNSLLNGLCRAQMMEEAQRVLEEMEVYGFVPDRFTYT 326
Query: 331 CLLSCHLKFGDLNSASKMVLEMLQRAKEARNSLAAAMLPFNAVGV-NNRTPSEQNVNCTN 389
L HLK G+++++ + E +++ + + + +L NA+ N +E+ +
Sbjct: 327 TLFDGHLKCGNVDASITLSEEAVRKGVQILDYTCSILL--NALCKEGNMEKAEEVLKKFL 384
Query: 390 SVDLENSGIIENHILSYEDFTKDRKFVALEAEVKRVLQTLLGMLQKQVELITTEHGILQP 449
L G+ N I++ D + + T+ M E L+P
Sbjct: 385 ENGLAPVGVFFNTIVNGYCQVGD---------INKAYTTIEKM----------EAVGLRP 425
Query: 450 TEKIYIKLVKAFLEAGKTKELTHFLIKAEKENL--QVSHDDAALGHVITLCISLGWLDQA 507
Y LVK F E +E + K ++ + V + + C+ D+
Sbjct: 426 NHVTYNSLVKKFCEMKNMEEAEKCIKKMVEKGVLPNVETYNTLIDGYGRSCL----FDRC 481
Query: 508 HDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQS 567
+L+EM G++ + Y L+ + E +L D G+ +A Y L+
Sbjct: 482 FQILEEMEKKGLKPNVISYGCLINCLCKDANILEAEVILGDMVHRGVVPNAQIYNMLIDG 541
Query: 568 KIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRID 627
+ A F EM +I +
Sbjct: 542 SCIAGKLKDAFRFFDEMVAREIVPT----------------------------------- 566
Query: 628 CGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTE 687
+ +N +I+ CKK + +AE + G + T++S+++GY++ G + E
Sbjct: 567 --LVTYNILINGLCKKGKVMEAENLASEITRKGLSFDVITYNSLISGYSS-AGNVQKALE 623
Query: 688 LWGEMKSFASSTSMNF------------------------------DEELLDSVLYTFVR 717
L+ MK ++N D + +++++ +V
Sbjct: 624 LYETMKKSGIKPTLNTYHRLIAGCGKEGLVLVEKIYQEMLQMNLVPDRVIYNALIHCYVE 683
Query: 718 GGFFARANEVVAMMEEGKMFIDKYKYRTLFLKYHK 752
G +A + + ME + DK Y L L + K
Sbjct: 684 HGDVQKACSLHSAMEAQGIQPDKMTYNCLILGHFK 718
>gi|168030898|ref|XP_001767959.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162680801|gb|EDQ67234.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 957
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 107/526 (20%), Positives = 207/526 (39%), Gaps = 72/526 (13%)
Query: 271 KAEQLLDIMPRIGVKADSNLLIIMAHIYERNGRREELRKLQRHIDEAVNLSDIQFRQFYN 330
+AE++ M +G+ + MA + GR E KL D + R +N
Sbjct: 335 EAEKIFKEMDTLGLLSHEKSYTSMAKVRAEAGRHAEALKL---FDVMAEKGLLTTRMTWN 391
Query: 331 CLLSCHLKFGDLNSASKMVLEML--------------------QRAKEARNSLAAAMLPF 370
LL C ++ GD+ A+K+ +M+ Q ++A N LA
Sbjct: 392 TLLHCFVRIGDVEQATKVYNDMVEAGSANVVTYGNMINLYSKFQMVEDAENLLAE----M 447
Query: 371 NAVGVNNRTPSEQNVNCTNSVDLENSGIIENHILSYEDFTKDR-KFVALEAEVKRVLQTL 429
GV P E + NS +I+ + ++ D + V E E+ + Q L
Sbjct: 448 RESGVK---PDEYIYGSFVKLYC-NSDMIDKATMVVQEMKDDGLESVCNEREMFPLGQAL 503
Query: 430 LGMLQKQV--ELIT--TEHGILQPTEKIYIKLVKAFLEAGKTKELTHFLI---------- 475
+ Q+ +L+ E G L+ E + KLV+A G + L+
Sbjct: 504 QSPIDTQILNQLLIKRAEAGELREAELLLDKLVEA---GGCIVDTAAVLMINLYGRRGLF 560
Query: 476 ---KAEKENLQVSHDDAAL---GHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASL 529
K+ +LQ +L +I LC L++A + D M G + + L
Sbjct: 561 QKAKSLFNSLQKKDHPPSLYVYNTMIKLCAVCKELEEAIFVFDRMEENGRMFDAVTVSIL 620
Query: 530 LKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKI 589
+ AY + R ++ L++ A+ G+ +D Y L++ + + GAL ++ EM+E+ I
Sbjct: 621 VHAYTKEGRFKDAAGLMKRAKKVGVAMDTVAYNTSLKANLKSGNLKGALEVYGEMQEADI 680
Query: 590 PRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDA 649
S + + +L+ ++ + G + EV + ++ +IH + ++A
Sbjct: 681 EPSA-KTYTILISLFSKLGDLGRAVQAF-EVLNSSEVGADEIAYSQMIHCYGCAGRPKEA 738
Query: 650 EKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEMKSFASSTSMNFDEELLD 709
+ M + G PN +++++ +A G + E L +M+ S
Sbjct: 739 ADLFQEMETKGFKPNEVIYNNLLDAFAR-AGLFAEARLLLSDMRRKGCPPS--------- 788
Query: 710 SVLYTFVRGGFFAR-----ANEVVAMMEEGKMFIDKYKYRTLFLKY 750
SV Y + + ++ A ++ +M++ ++ D Y + Y
Sbjct: 789 SVTYLLLMSAYGSKGKPADAESLLHLMQDRGLYPDCRHYNEVIRAY 834
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 64/262 (24%), Positives = 115/262 (43%), Gaps = 15/262 (5%)
Query: 497 LCISL----GWLDQAHDLLDEMHLAGVRASSSV-YASLLKAYIEANRPREVTALLRDARS 551
+CI L GW QA + + M L + S + Y +LL Y +A + L +
Sbjct: 77 MCIVLKEQRGW-RQAREFFEWMKLQIPYSPSVIAYTTLLGIYGQAGKLTLAEETLSEMLD 135
Query: 552 AGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGC-AQNHEA 610
AG++ D +L++ + L ++ M++ + S H M+V A+ H
Sbjct: 136 AGVEPDEVAGGCMLEAYARWERYDTLLEFYEAMRQRGLVPSAHVYRTMIVTLYKAERHSD 195
Query: 611 GLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHS 670
LM L E ++++ + +IH K+ +DA K MR+ GHLP+ +++
Sbjct: 196 ALM---LWEDLLVEKLEPNFVLYAIIIHILNKEGRTEDAVHTFKDMRAAGHLPDELLYNT 252
Query: 671 MVTGYAAIGGKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAM 730
++ + G+Y E L+ +MK S F ++ +V + + G FA A E +A
Sbjct: 253 IICALGKL-GRYQESEALYLDMKKQGIVPS-KFTYTIMINV---WSKAGRFASAAETLAE 307
Query: 731 MEEGKMFIDKYKYRTLFLKYHK 752
M+ D+ Y ++ Y K
Sbjct: 308 MQRSGCIADEVVYCSIINMYGK 329
Score = 46.6 bits (109), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 72/328 (21%), Positives = 134/328 (40%), Gaps = 43/328 (13%)
Query: 449 PTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQAH 508
P+ Y L+ + +AGK L +E + V D+ A G ++ D
Sbjct: 105 PSVIAYTTLLGIYGQAGKLTLAEETL--SEMLDAGVEPDEVAGGCMLEAYARWERYDTLL 162
Query: 509 DLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSK 568
+ + M G+ S+ VY +++ +A R + L D ++ + Y ++
Sbjct: 163 EFYEAMRQRGLVPSAHVYRTMIVTLYKAERHSDALMLWEDLLVEKLEPNFVLYAIIIHIL 222
Query: 569 IVQKDTPGALHLFKEMKES-----------------KIPRSGHQE---FEMLVKGCAQNH 608
+ T A+H FK+M+ + K+ R E +M +G +
Sbjct: 223 NKEGRTEDAVHTFKDMRAAGHLPDELLYNTIICALGKLGRYQESEALYLDMKKQGIVPSK 282
Query: 609 -----------EAGLMAKLLQEVKEGQRIDCGVHD--WNNVIHFFCKKRLMQDAEKALKR 655
+AG A + + E QR C + + ++I+ + K L ++AEK K
Sbjct: 283 FTYTIMINVWSKAGRFASAAETLAEMQRSGCIADEVVYCSIINMYGKAGLYEEAEKIFKE 342
Query: 656 MRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEMKSFA-SSTSMNFDEELLDSVLYT 714
M +LG L + +++ SM A G++ E +L+ M +T M + +++L+
Sbjct: 343 MDTLGLLSHEKSYTSMAK-VRAEAGRHAEALKLFDVMAEKGLLTTRMTW-----NTLLHC 396
Query: 715 FVRGGFFARANEVV-AMMEEGKMFIDKY 741
FVR G +A +V M+E G + Y
Sbjct: 397 FVRIGDVEQATKVYNDMVEAGSANVVTY 424
>gi|91806015|gb|ABE65736.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 360
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/250 (22%), Positives = 104/250 (41%), Gaps = 7/250 (2%)
Query: 478 EKENLQVSHDDAALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEAN 537
+ +NL +SH+ I L A +L +M G S SLL + N
Sbjct: 100 QMQNLGISHNLYTYSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGN 159
Query: 538 RPREVTALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEF 597
R E AL+ G Q D + L+ A+ L + M K + +
Sbjct: 160 RISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERM-VVKGCQPDLVTY 218
Query: 598 EMLVKGCAQNHEAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMR 657
++ G + E L LL ++++G +I+ V +N +I CK + M DA +M
Sbjct: 219 GAVINGLCKRGEPDLALNLLNKMEKG-KIEADVVIYNTIIDGLCKYKHMDDAFDLFNKME 277
Query: 658 SLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVR 717
+ G P+ T++ +++ G++++ + L +M ++N D ++++ FV+
Sbjct: 278 TKGIKPDVFTYNPLISCLCNY-GRWSDASRLLSDML----EKNINPDLVFFNALIDAFVK 332
Query: 718 GGFFARANEV 727
G A ++
Sbjct: 333 EGKLVEAEKL 342
Score = 48.9 bits (115), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 93/196 (47%), Gaps = 17/196 (8%)
Query: 539 PREVTALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFE 598
PR T L + AG D C E L + + A+ LF +M +S+ P EF
Sbjct: 24 PR--TTLCWERSFAGASSD-DCRENLSRKVLQDLKLDDAIGLFGDMVKSR-PFPSIVEFS 79
Query: 599 MLVKGCAQNHEAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRS 658
L+ A+ ++ L+ L +++ + I ++ ++ I++FC++ + A L +M
Sbjct: 80 KLLSAIAKMNKFDLVISLGEQM-QNLGISHNLYTYSIFINYFCRRSQLSLALAILGKMMK 138
Query: 659 LGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRG 718
LG+ P+ T +S++ G+ G + +E L +M M + D+V +T +
Sbjct: 139 LGYGPSIVTLNSLLNGFCH-GNRISEAVALVDQM------VEMGYQP---DTVTFTTLVH 188
Query: 719 GFFA--RANEVVAMME 732
G F +A+E VA++E
Sbjct: 189 GLFQHNKASEAVALVE 204
>gi|227202654|dbj|BAH56800.1| AT2G41720 [Arabidopsis thaliana]
Length = 815
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 62/280 (22%), Positives = 131/280 (46%), Gaps = 16/280 (5%)
Query: 443 EHGILQPTEKIYIKLVKAF---LEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCI 499
++GI+ P Y L+ ++ + GK KE+ + K ++ V+++ +I
Sbjct: 383 QNGII-PDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYN-----ALIDAYG 436
Query: 500 SLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDAS 559
S G+L +A ++ +M G++ + +LL A + + V +L A+S GI L+ +
Sbjct: 437 SNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTA 496
Query: 560 CYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQE 619
Y + + S I + A+ L++ M++ K+ ++ F +L+ G + + L+E
Sbjct: 497 AYNSAIGSYINAAELEKAIALYQSMRKKKV-KADSVTFTILISGSCRMSKYPEAISYLKE 555
Query: 620 VKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIG 679
+ E I +++V+ + K+ + +AE +M+ G P+ + SM+ Y A
Sbjct: 556 M-EDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYNA-S 613
Query: 680 GKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGG 719
K+ + EL EM+ + + D +++ F +GG
Sbjct: 614 EKWGKACELLLEME----ANGIEPDSIACSALMRAFNKGG 649
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 52/246 (21%), Positives = 108/246 (43%), Gaps = 9/246 (3%)
Query: 507 AHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQ 566
A +L+D+M A + S S Y +L+ A + RE + + G+ D + +L
Sbjct: 197 AMNLMDDMLRAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLS 256
Query: 567 SKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRI 626
+ + AL F+ MK +K+ R F +++ ++ ++ L ++E +R
Sbjct: 257 AYKSGRQYSKALSYFELMKGAKV-RPDTTTFNIIIYCLSKLGQSSQALDLFNSMRE-KRA 314
Query: 627 DC--GVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTE 684
+C V + +++H + K +++ + M + G PN ++++++ YA G T
Sbjct: 315 ECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTA 374
Query: 685 VTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFIDKYKYR 744
++ L G++K + D +L ++ R +A EV MM + + + Y
Sbjct: 375 LSVL-GDIK----QNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYN 429
Query: 745 TLFLKY 750
L Y
Sbjct: 430 ALIDAY 435
>gi|414871539|tpg|DAA50096.1| TPA: ATP binding protein [Zea mays]
Length = 692
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 75/318 (23%), Positives = 122/318 (38%), Gaps = 33/318 (10%)
Query: 447 LQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVI--TLCISLGWL 504
+ P Y +V+A G+ + L + + + HVI C G
Sbjct: 155 VPPNAYTYFPVVRALCARGRIADALAVLDEMPRRGCA---PIPPMYHVILEAACRG-GGF 210
Query: 505 DQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEAL 564
A +L+++H G +L A + E LLRD S G + D Y A+
Sbjct: 211 RSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVDEALHLLRDLPSFGCEPDVVSYNAV 270
Query: 565 LQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAK----LLQEV 620
L+ + K L +EM P + F L+ +N GL + L Q V
Sbjct: 271 LKGLCMAKRWGCVQELMEEMVRMACPPN-IVTFNTLISYLCRN---GLFERVHEVLAQMV 326
Query: 621 KEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGG 680
+ G D + + +I CK+ ++ A + L RM S G PN +++++ G +
Sbjct: 327 EHGCTPD--IRMYATIIDGICKEGHLEVAHEILNRMPSYGLKPNVVCYNTLLKGLCS-AE 383
Query: 681 KYTEVTELWGEMKSFASSTSMNFDEEL-LDSVLYT-----FVRGGFFARANEVVAMMEEG 734
++ E EL EM FD++ LD V + F + G R E++ M E
Sbjct: 384 RWEETEELLAEM----------FDKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEH 433
Query: 735 KMFIDKYKYRTLFLKYHK 752
D Y T+ + K
Sbjct: 434 GCMPDVITYTTVINGFCK 451
Score = 47.4 bits (111), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 59/286 (20%), Positives = 107/286 (37%), Gaps = 47/286 (16%)
Query: 447 LQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQ 506
L+P Y L+K A + +E L AE + DD ++ G +D+
Sbjct: 365 LKPNVVCYNTLLKGLCSAERWEETEELL--AEMFDKDCPLDDVTFNILVDFFCQNGLVDR 422
Query: 507 AHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQ 566
+LL++M G Y +++ + + E LL+ + G + + Y +L+
Sbjct: 423 VIELLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLK 482
Query: 567 SKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRI 626
+ A L +M + +GC N
Sbjct: 483 GLCSAERWVDAEDLMSQMIQ---------------QGCPLNPIT---------------- 511
Query: 627 DCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVT 686
+N +I+F CKK L++ A + LK+M G P+ ++ +++ G GK E
Sbjct: 512 ------FNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGK-AGKTDEAL 564
Query: 687 ELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMME 732
EL M + M+ + + S+ R G R N+V+ M +
Sbjct: 565 ELLNVM----VNKGMSPNTIIYSSIASALSREG---RINKVIQMFD 603
>gi|449443502|ref|XP_004139516.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16390,
chloroplastic-like [Cucumis sativus]
gi|449492820|ref|XP_004159111.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16390,
chloroplastic-like [Cucumis sativus]
Length = 704
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/231 (22%), Positives = 96/231 (41%), Gaps = 7/231 (3%)
Query: 448 QPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQA 507
P + Y ++ A+ AG +A EN ++ D A +I + G D
Sbjct: 246 NPDDVTYSTMIDAYGRAGNVDMAFSLYDRARTENWRI--DPATFSTMIKIHGVAGNYDGC 303
Query: 508 HDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQS 567
++ +EM G++ + +Y LL A A RP ++ + ++ G + Y +LL++
Sbjct: 304 LNVYEEMKAIGIKPNLVIYNCLLDAMGRAKRPWQIKTIYKEMIKNGFSPSWATYASLLRA 363
Query: 568 KIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRID 627
+ AL ++KEMKE + + + L+ CA ++ Q++K
Sbjct: 364 YGRARYGEDALIVYKEMKEKGL-QLNVILYNTLLAMCADVGYVNEAVEIFQDMKSSGT-- 420
Query: 628 CGVHDW--NNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYA 676
C W +++I + + +AE+ L M G PN S++ Y
Sbjct: 421 CSPDSWTFSSMITIYSCGGKVSEAEEMLNDMVEAGFDPNIFVLTSLIQCYG 471
>gi|224713524|gb|ACN62069.1| PPR-814c [Zea mays]
Length = 814
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 84/179 (46%), Gaps = 6/179 (3%)
Query: 518 GVRASSSVYASLLKAYIEANRPRE-VTALLRDARSAGIQLDASCYEALLQSKIVQKDTPG 576
G+R + + LL+ + EA R E + LL G D Y LL+S Q +
Sbjct: 141 GLRVNIIIANHLLEGFCEAKRTDEALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQ 200
Query: 577 ALHLFKEMKES-KIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQE-VKEGQRIDCGVHDWN 634
A L + M E + + ++ G + + L +E V+ G D + +N
Sbjct: 201 ADDLLRMMAEGGAVCSPNVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPD--LVTYN 258
Query: 635 NVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEMK 693
+V+H CK R M AE L++M + LPN T+++++ GY++ G++ E ++ EM+
Sbjct: 259 SVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSST-GQWKEAVRVFKEMR 316
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 80/430 (18%), Positives = 166/430 (38%), Gaps = 72/430 (16%)
Query: 248 AMKPNTNTFNI---ALAGCLLFETTRKAEQLLDIMPRIGVKADSNLLIIMAHIYERNGRR 304
+ P+ TFN+ A A C + + KA + + M GVK D + R G+
Sbjct: 389 GIAPDFYTFNVLIKAYANCGMLD---KAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKM 445
Query: 305 EE-LRKLQRHIDEAVNLSDIQFRQFYNCLLSCHLKFGDLNSASKMVLEMLQRAKEARNSL 363
++ + K + ID+ V + YNCL+ G L A +++ E++ N +
Sbjct: 446 DDAMEKFNQMIDQGVAPD----KYAYNCLIQGFCTHGSLLKAKELISEIMN------NGM 495
Query: 364 AAAMLPFNAVGVNNRTPSEQNVNCTNSVDLE-NSGIIENHILSYEDFTKDRKFVALEAEV 422
++ F+++ +NN + ++ N DL N G+ + ++ ++ L ++
Sbjct: 496 HLDIVFFSSI-INNLCKLGRVMDAQNIFDLTVNVGLHPDAVV----YSMLMDGYCLVGKM 550
Query: 423 KRVLQTLLGMLQKQVELITTEHGILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENL 482
++ L+ M+ +E P +Y LV + + G+
Sbjct: 551 EKALRVFDAMVSAGIE----------PNVVVYCTLVNGYCKIGR---------------- 584
Query: 483 QVSHDDAALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREV 542
+D+ L EM G++ S+ +Y+ ++ +A R
Sbjct: 585 ---------------------IDEGLSLFREMLQRGIKPSTILYSIIIDGLFQAGRTVPA 623
Query: 543 TALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVK 602
+ +GI +D Y +L+ + A+ LFKE++ + + ++
Sbjct: 624 KVKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNV-KINIITLNTMID 682
Query: 603 GCAQNHEAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHL 662
G Q L + R+ V ++ +I K+ L+++AE M++ G
Sbjct: 683 GMFQTRRVEEAKDLFASISR-SRLVPSVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCE 741
Query: 663 PNAQTFHSMV 672
PN++ + +V
Sbjct: 742 PNSRLLNHVV 751
Score = 49.7 bits (117), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 93/437 (21%), Positives = 166/437 (37%), Gaps = 47/437 (10%)
Query: 257 NIALAGCLL--FETTRKAEQLLDIM----PRIGVKADSNLLIIMAHIYERNGRREELRKL 310
NI +A LL F ++ ++ LDI+ P +G D I+ G+ + L
Sbjct: 145 NIIIANHLLEGFCEAKRTDEALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDL 204
Query: 311 QRHIDEAVNLSDIQFRQFYNCLLSCHLKFGDLNSASKMVLEMLQRAKE----ARNSLAAA 366
R + E + YN ++ K GD+N A + EM+QR NS+ A
Sbjct: 205 LRMMAEGGAVCSPNVVA-YNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHA 263
Query: 367 MLPFNAVGVNNRTPSEQNVNCTNSVDLENSGIIENHILSYEDFTKDRKFVALEAEVKRVL 426
+ A+ + N L N+ N I Y + ++ V + E++R
Sbjct: 264 LCKARAMDKAEAFLRQM----VNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRR-- 317
Query: 427 QTLLGMLQKQVELITTEHGILQPTEKIYIKLVKAFLEAGKTKELTHFL--IKAEKENLQV 484
H IL P L+ + + GK KE + + +N V
Sbjct: 318 -----------------HSIL-PDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDV 359
Query: 485 SHDDAALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTA 544
+ L T G L DL D M G+ + L+KAY +
Sbjct: 360 FSYNIMLNGYATK----GCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMI 415
Query: 545 LLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGC 604
+ + R G++ D Y ++ + A+ F +M + + + + L++G
Sbjct: 416 IFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYA-YNCLIQGF 474
Query: 605 AQNHEAGLMAK-LLQEV-KEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHL 662
H + L AK L+ E+ G +D + ++++I+ CK + DA+ ++G
Sbjct: 475 C-THGSLLKAKELISEIMNNGMHLD--IVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLH 531
Query: 663 PNAQTFHSMVTGYAAIG 679
P+A + ++ GY +G
Sbjct: 532 PDAVVYSMLMDGYCLVG 548
>gi|414591648|tpg|DAA42219.1| TPA: PPR-814b [Zea mays]
Length = 827
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 84/179 (46%), Gaps = 6/179 (3%)
Query: 518 GVRASSSVYASLLKAYIEANRPRE-VTALLRDARSAGIQLDASCYEALLQSKIVQKDTPG 576
G+R + + LL+ + EA R E + LL G D Y LL+S Q +
Sbjct: 154 GLRVNIIIANHLLEGFCEAKRTDEALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQ 213
Query: 577 ALHLFKEMKES-KIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQE-VKEGQRIDCGVHDWN 634
A L + M E + + ++ G + + L +E V+ G D + +N
Sbjct: 214 ADDLLRMMAEGGAVCSPNVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPD--LVTYN 271
Query: 635 NVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEMK 693
+V+H CK R M AE L++M + LPN T+++++ GY++ G++ E ++ EM+
Sbjct: 272 SVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSST-GQWKEAVRVFKEMR 329
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 80/430 (18%), Positives = 166/430 (38%), Gaps = 72/430 (16%)
Query: 248 AMKPNTNTFNI---ALAGCLLFETTRKAEQLLDIMPRIGVKADSNLLIIMAHIYERNGRR 304
+ P+ TFN+ A A C + + KA + + M GVK D + R G+
Sbjct: 402 GIAPDFYTFNVLIKAYANCGMLD---KAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKM 458
Query: 305 EE-LRKLQRHIDEAVNLSDIQFRQFYNCLLSCHLKFGDLNSASKMVLEMLQRAKEARNSL 363
++ + K + ID+ V + YNCL+ G L A +++ E++ N +
Sbjct: 459 DDAMEKFNQMIDQGVAPD----KYAYNCLIQGFCTHGSLLKAKELISEIMN------NGM 508
Query: 364 AAAMLPFNAVGVNNRTPSEQNVNCTNSVDLE-NSGIIENHILSYEDFTKDRKFVALEAEV 422
++ F+++ +NN + ++ N DL N G+ + ++ ++ L ++
Sbjct: 509 HLDIVFFSSI-INNLCKLGRVMDAQNIFDLTVNVGLHPDAVV----YSMLMDGYCLVGKM 563
Query: 423 KRVLQTLLGMLQKQVELITTEHGILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENL 482
++ L+ M+ +E P +Y LV + + G+
Sbjct: 564 EKALRVFDAMVSAGIE----------PNVVVYCTLVNGYCKIGR---------------- 597
Query: 483 QVSHDDAALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREV 542
+D+ L EM G++ S+ +Y+ ++ +A R
Sbjct: 598 ---------------------IDEGLSLFREMLQRGIKPSTILYSIIIDGLFQAGRTVPA 636
Query: 543 TALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVK 602
+ +GI +D Y +L+ + A+ LFKE++ + + ++
Sbjct: 637 KMKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNV-KINIITLNTMID 695
Query: 603 GCAQNHEAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHL 662
G Q L + R+ V ++ +I K+ L+++AE M++ G
Sbjct: 696 GMFQTRRVEEAKDLFASISR-SRLVPNVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCE 754
Query: 663 PNAQTFHSMV 672
PN++ + +V
Sbjct: 755 PNSRLLNHVV 764
Score = 49.7 bits (117), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 93/437 (21%), Positives = 166/437 (37%), Gaps = 47/437 (10%)
Query: 257 NIALAGCLL--FETTRKAEQLLDIM----PRIGVKADSNLLIIMAHIYERNGRREELRKL 310
NI +A LL F ++ ++ LDI+ P +G D I+ G+ + L
Sbjct: 158 NIIIANHLLEGFCEAKRTDEALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDL 217
Query: 311 QRHIDEAVNLSDIQFRQFYNCLLSCHLKFGDLNSASKMVLEMLQRAKE----ARNSLAAA 366
R + E + YN ++ K GD+N A + EM+QR NS+ A
Sbjct: 218 LRMMAEGGAVCSPNVVA-YNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHA 276
Query: 367 MLPFNAVGVNNRTPSEQNVNCTNSVDLENSGIIENHILSYEDFTKDRKFVALEAEVKRVL 426
+ A+ + N L N+ N I Y + ++ V + E++R
Sbjct: 277 LCKARAMDKAEAFLRQM----VNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRR-- 330
Query: 427 QTLLGMLQKQVELITTEHGILQPTEKIYIKLVKAFLEAGKTKELTHFL--IKAEKENLQV 484
H IL P L+ + + GK KE + + +N V
Sbjct: 331 -----------------HSIL-PDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDV 372
Query: 485 SHDDAALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTA 544
+ L T G L DL D M G+ + L+KAY +
Sbjct: 373 FSYNIMLNGYATK----GCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMI 428
Query: 545 LLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGC 604
+ + R G++ D Y ++ + A+ F +M + + + + L++G
Sbjct: 429 IFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYA-YNCLIQGF 487
Query: 605 AQNHEAGLMAK-LLQEV-KEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHL 662
H + L AK L+ E+ G +D + ++++I+ CK + DA+ ++G
Sbjct: 488 C-THGSLLKAKELISEIMNNGMHLD--IVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLH 544
Query: 663 PNAQTFHSMVTGYAAIG 679
P+A + ++ GY +G
Sbjct: 545 PDAVVYSMLMDGYCLVG 561
>gi|224089372|ref|XP_002308709.1| predicted protein [Populus trichocarpa]
gi|222854685|gb|EEE92232.1| predicted protein [Populus trichocarpa]
Length = 1115
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/191 (20%), Positives = 86/191 (45%), Gaps = 2/191 (1%)
Query: 489 AALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRD 548
G +I + G LD AH++ D M G R +S++Y L+ Y + +
Sbjct: 896 CTFGPLIDGLLKSGRLDDAHEMFDGMVHYGCRPNSAIYNILVNGYGKLGHVDTACEFFKR 955
Query: 549 ARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNH 608
GI+ D Y L+ + ALH F+++K++ + + +++ G ++
Sbjct: 956 MVKEGIRPDLKSYTILVDILCIAGRVDDALHYFEKLKQAGLDPD-LVAYNLMINGLGRSQ 1014
Query: 609 EAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTF 668
L E+ + + I ++ +N++I ++++A K + ++ +G PN T+
Sbjct: 1015 RTEEALSLFHEM-QNRGIVPDLYTYNSLILNLGIVGMIEEAGKIYEELQFIGLKPNVFTY 1073
Query: 669 HSMVTGYAAIG 679
++++ GY G
Sbjct: 1074 NALIRGYTLSG 1084
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 60/286 (20%), Positives = 110/286 (38%), Gaps = 44/286 (15%)
Query: 448 QPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQA 507
+P + Y+ L+ F + G ++ I E E + D ++ G +++A
Sbjct: 331 KPDKVTYVTLLDKFSDCGHLDKVEK--IWTEMEADGYAPDVVTFTILVNALCKAGRINEA 388
Query: 508 HDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQS 567
DLLD M GV + Y +L+ + ANR + L + S G++ A Y L+
Sbjct: 389 FDLLDTMRKQGVLPNLHTYNTLISGLLRANRLDDALDLFSNMESLGVEPTAYTYILLIDY 448
Query: 568 KIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRID 627
AL F++MK +G A N A
Sbjct: 449 HGKSGHPGKALETFEKMK---------------ARGIAPNIVA----------------- 476
Query: 628 CGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTE 687
N ++ + + +A+ ++S G P++ T++ M+ Y+ + G+ E +
Sbjct: 477 -----CNASLYSLAEMGRLGEAKAMFNELKSSGLAPDSVTYNMMMKCYSKV-GQVDEAIK 530
Query: 688 LWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEE 733
L EM S D +++S++ T + G A ++ MEE
Sbjct: 531 LLSEM----SKVQCEPDVIVINSLIDTLYKAGRVEEAWQMFCRMEE 572
Score = 43.1 bits (100), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 51/255 (20%), Positives = 100/255 (39%), Gaps = 8/255 (3%)
Query: 441 TTEHGILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCIS 500
T E G+ +PT K+Y L+ FLE + + E ++ + D +I
Sbjct: 781 TKELGV-KPTLKVYNLLIDGFLEVHNVEVAWNLF--EEMKSAGCAPDTFTYNSLIDAHGK 837
Query: 501 LGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASC 560
G +++ DL DEM G + ++ Y ++ +++NR + L + S
Sbjct: 838 SGKINELFDLYDEMLTRGCKPNTITYNMVISNLVKSNRLDKAMDLYYNLVSGDFSPTPCT 897
Query: 561 YEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQE- 619
+ L+ + A +F M R + +LV G + + +
Sbjct: 898 FGPLIDGLLKSGRLDDAHEMFDGMVHYGC-RPNSAIYNILVNGYGKLGHVDTACEFFKRM 956
Query: 620 VKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIG 679
VKEG R D + + ++ C + DA ++++ G P+ ++ M+ G
Sbjct: 957 VKEGIRPD--LKSYTILVDILCIAGRVDDALHYFEKLKQAGLDPDLVAYNLMINGLGR-S 1013
Query: 680 GKYTEVTELWGEMKS 694
+ E L+ EM++
Sbjct: 1014 QRTEEALSLFHEMQN 1028
Score = 42.7 bits (99), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 39/187 (20%), Positives = 74/187 (39%), Gaps = 3/187 (1%)
Query: 510 LLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKI 569
LL+EM G+R + Y ++ + E +++ G D Y L+ +
Sbjct: 251 LLEEMESMGLRPNIYTYTICIRVLGRDGKIDEAYRIMKRMDDDGCGPDVVTYTVLIDALC 310
Query: 570 VQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRIDCG 629
+ A+ LF +MK S +L K H + + +G D
Sbjct: 311 TARKLDDAMCLFTKMKSSSHKPDKVTYVTLLDKFSDCGHLDKVEKIWTEMEADGYAPD-- 368
Query: 630 VHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELW 689
V + +++ CK + +A L MR G LPN T++++++G + + +L+
Sbjct: 369 VVTFTILVNALCKAGRINEAFDLLDTMRKQGVLPNLHTYNTLISGLLR-ANRLDDALDLF 427
Query: 690 GEMKSFA 696
M+S
Sbjct: 428 SNMESLG 434
Score = 41.2 bits (95), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 32/175 (18%), Positives = 73/175 (41%), Gaps = 2/175 (1%)
Query: 501 LGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASC 560
+G L +A + +E+ +G+ S Y ++K Y + + E LL + + D
Sbjct: 487 MGRLGEAKAMFNELKSSGLAPDSVTYNMMMKCYSKVGQVDEAIKLLSEMSKVQCEPDVIV 546
Query: 561 YEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEV 620
+L+ + A +F M+E + + + +L+ G + + +L + +
Sbjct: 547 INSLIDTLYKAGRVEEAWQMFCRMEEMNLAPT-VVTYNILLAGLGKEGQIQKAVQLFESM 605
Query: 621 KEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGY 675
G +N ++ CK + A K +M ++ P+ TF++++ G+
Sbjct: 606 N-GHGCSPNTITFNTLLDCLCKNDEVDLALKMFYKMTTMNCRPDVLTFNTIIHGF 659
>gi|449484944|ref|XP_004157025.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g16010-like [Cucumis sativus]
Length = 637
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/239 (21%), Positives = 107/239 (44%), Gaps = 11/239 (4%)
Query: 511 LDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIV 570
++M G+ SS YA L+ + + NR + LL + G + Y +L+ S
Sbjct: 394 FEKMKANGIAPSSFTYAILIDGFCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLIDSLGR 453
Query: 571 QKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRIDCG- 629
K A LF+E+KE+ RS + + +++K G ++ + E +++ C
Sbjct: 454 AKRYEAANELFQELKEN-CGRSSARVYAVMIKHFGN---CGRLSDAVDLFCEXEKLGCSP 509
Query: 630 -VHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTEL 688
V+ +N ++ + ++ +A ++ MR G P+ ++ + ++ G A GG + E+
Sbjct: 510 DVYTYNALMSGMIRAGMIDEAHSLMRNMRENGCTPDIKSHNIILNGLAKTGGPKRAI-EM 568
Query: 689 WGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFIDKYKYRTLF 747
+ +MK + + D +++L R G F A +++ M+ D Y ++
Sbjct: 569 FTKMK----ESEIMPDAVSYNTILSCLSRAGMFEMAAKLMREMKLKGFEYDSITYSSIL 623
>gi|413926774|gb|AFW66706.1| hypothetical protein ZEAMMB73_789977 [Zea mays]
Length = 642
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 93/212 (43%), Gaps = 11/212 (5%)
Query: 523 SSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFK 582
+ VY L+ + +R V AL +D AG Q D LL++ G + L +
Sbjct: 110 TPVYNRLILTALRESRLDLVEALYKDLLLAGAQPDVFTRNLLLRALC----DAGRMELAQ 165
Query: 583 EMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCK 642
+ E+ +P F +L +G + + K+L + + C N V+ FCK
Sbjct: 166 RVFEA-MPVRNEFSFGILARGYCRAGRSVDALKVLDGMPSMNLVVC-----NTVVAGFCK 219
Query: 643 KRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEMKSFASSTSMN 702
+ L+++AE+ ++RMR G PN TF+S ++ G+ + ++ +M+
Sbjct: 220 EGLVEEAERLVERMRVQGLAPNVVTFNSRISALCK-AGRVLDAYRIFKDMQEDWQHGLPR 278
Query: 703 FDEELLDSVLYTFVRGGFFARANEVVAMMEEG 734
D+ D +L F GF A +V +M G
Sbjct: 279 PDQVTFDVMLSGFCDAGFVDEARVLVDIMRCG 310
Score = 39.3 bits (90), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 47/221 (21%), Positives = 91/221 (41%), Gaps = 27/221 (12%)
Query: 449 PTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQAH 508
P Y L+++ AG+T E L + ++ S D A +I LD A
Sbjct: 419 PNSFTYNVLLQSLWRAGRTTEAERLLERMSEKG--YSLDTAGCNIIIDGLCRNSKLDVAM 476
Query: 509 DLLDEMHLAG-------------VRASSSV----------YASLLKAYIEANRPREVTAL 545
++D M G V + SS+ Y+ L+ A + R E
Sbjct: 477 GIVDGMWEEGSTALGRLGNSFLSVVSDSSISQRCLPDRITYSILISALCKEGRFDEAKKK 536
Query: 546 LRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCA 605
L + I D+ Y+ + T A+ + ++M E K + + +L++G
Sbjct: 537 LLEMIVKDISPDSVIYDTFIHGYCKHGKTSLAIKVLRDM-EKKGCNPSTRTYNLLIRGFE 595
Query: 606 QNHEAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLM 646
+ H++ + KL+ E++E + + V +N++I FC++ ++
Sbjct: 596 EKHKSDEIMKLMSEMEE-KGVSPNVLTYNSLIKSFCQQGML 635
>gi|357138611|ref|XP_003570884.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g17140-like [Brachypodium distachyon]
Length = 864
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 90/220 (40%), Gaps = 13/220 (5%)
Query: 516 LAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQKDTP 575
L G + VY LL A + +R V AL +D AG D ALL++
Sbjct: 101 LGGAAPPTPVYNRLLLAALREDRLDLVEALYKDLLLAGATPDVFTRNALLEALSAAGRMD 160
Query: 576 GALHLFKEMKESKIPRSGHQEFEMLVKG-CAQNHEAGLMAKLLQEVKEGQRIDCGVHDWN 634
A +F M SG +L +G C A +A +L + E + C N
Sbjct: 161 LARRVFDAMPARNEFSSG-----ILARGYCRAGRSADALA-VLDAMPEMNLVVC-----N 209
Query: 635 NVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEMKS 694
V+ FC++ + +AE+ + RMR+ G PN TF+ ++ G+ E ++ +M+
Sbjct: 210 TVVAGFCREGRVDEAERLVDRMRAQGLAPNVVTFNGRISALCK-AGRVLEAYRIFNDMQE 268
Query: 695 FASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEG 734
D+ D +L F G A +V +M G
Sbjct: 269 AWEQGLPRPDQVTFDVMLSGFCDAGMVDEATVLVDIMRCG 308
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 82/393 (20%), Positives = 152/393 (38%), Gaps = 54/393 (13%)
Query: 314 IDEAVNLSDIQ-----FRQF--YNCLLSCHLKFGDLNSASKMVLEMLQRAKEARNSLAAA 366
+DEA L DI R+ YN LS +K G + A +++ EM A +
Sbjct: 295 VDEATVLVDIMRCGGFLRKVESYNRWLSGLVKNGRVGEAQELLSEM------AHEGVQPN 348
Query: 367 MLPFNAVGVNNRTPSEQNVNCTNSVDLENSGIIENHILSYEDFTKDRKFVALEAEVKRVL 426
+N + V+ + + D SG++ +++Y R+L
Sbjct: 349 SYTYNII-VDGLCKEGKAFDVRRVEDFVRSGVMTPDVVTYTSLLHAYCSKGNTTAANRIL 407
Query: 427 QTLLGMLQKQVELITTEHGILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSH 486
M QK P Y L+++ L+AG+T E+ L + ++ S
Sbjct: 408 DE---MAQKGC----------APNLFTYNVLLQSLLKAGRTTEVERLLERMSEKGY--SL 452
Query: 487 DDAALGHVITLCISLGWLDQAHDLLDEM----HLAGVRASSS------------------ 524
D A+ +I L+ A D++D M LA R +S
Sbjct: 453 DTASCNIIIDGLCRNSKLEMAMDIVDGMWNEGRLALRRLGNSFVSLVSDSSISKSCLPDR 512
Query: 525 -VYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKE 583
Y++L+ A + R E L + I D+ Y+ + + T A+ + ++
Sbjct: 513 ITYSTLMNALCKEGRFDEAKKKLVEMIGKDISPDSVIYDTFIHGYCMHGKTSLAIKVLRD 572
Query: 584 MKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKK 643
M E + + + +L+ G + ++ + KL+ E+KE + I V +N++I FC +
Sbjct: 573 M-EKRSCNPSTRSYNLLIWGFQEKQKSDEILKLMSEMKE-KGISSNVMTYNSLIKSFCGR 630
Query: 644 RLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYA 676
++ A L M +PN +F ++ +
Sbjct: 631 GMVNKAMPLLDEMLQNEIVPNVTSFGLLIKAFC 663
Score = 41.2 bits (95), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 63/320 (19%), Positives = 123/320 (38%), Gaps = 20/320 (6%)
Query: 457 LVKAFLEAGKTKELTHFLIKAEKENLQ---VSHDDAALGHVITLCISLGWLDQAHDLLDE 513
+V F G+ E + + + L V+ + G + LC + G + +A+ + ++
Sbjct: 211 VVAGFCREGRVDEAERLVDRMRAQGLAPNVVTFN----GRISALCKA-GRVLEAYRIFND 265
Query: 514 MHLA---GV-RASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKI 569
M A G+ R + +L + +A E T L+ R G Y L +
Sbjct: 266 MQEAWEQGLPRPDQVTFDVMLSGFCDAGMVDEATVLVDIMRCGGFLRKVESYNRWLSGLV 325
Query: 570 VQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRIDCG 629
A L EM + + + + ++V G + +A + ++ V+ G +
Sbjct: 326 KNGRVGEAQELLSEMAHEGVQPNSYT-YNIIVDGLCKEGKAFDVRRVEDFVRSGV-MTPD 383
Query: 630 VHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELW 689
V + +++H +C K A + L M G PN T++ ++ G+ TEV L
Sbjct: 384 VVTYTSLLHAYCSKGNTTAANRILDEMAQKGCAPNLFTYNVLLQSLLK-AGRTTEVERLL 442
Query: 690 GEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVV-AMMEEGKMFIDKYKYRTLFL 748
M S + D + ++ R A ++V M EG++ + + + L
Sbjct: 443 ERM----SEKGYSLDTASCNIIIDGLCRNSKLEMAMDIVDGMWNEGRLALRRLGNSFVSL 498
Query: 749 KYHKTLYKGKTPKFQTEAQL 768
++ K P T + L
Sbjct: 499 VSDSSISKSCLPDRITYSTL 518
>gi|224713518|gb|ACN62066.1| PPR-817 [Zea mays]
Length = 817
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 84/179 (46%), Gaps = 6/179 (3%)
Query: 518 GVRASSSVYASLLKAYIEANRPRE-VTALLRDARSAGIQLDASCYEALLQSKIVQKDTPG 576
G+R + + LL+ + EA R E + LL G D Y LL+S Q +
Sbjct: 144 GLRVNIIIANHLLEGFCEAKRTDEALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQ 203
Query: 577 ALHLFKEMKES-KIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQE-VKEGQRIDCGVHDWN 634
A L + M E + + ++ G + + L +E V+ G D + +N
Sbjct: 204 ADDLLRMMAEGGAVCSPNVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPD--LVTYN 261
Query: 635 NVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEMK 693
+V+H CK R M AE L++M + LPN T+++++ GY++ G++ E ++ EM+
Sbjct: 262 SVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSST-GQWKEAVRVFKEMR 319
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 83/435 (19%), Positives = 165/435 (37%), Gaps = 82/435 (18%)
Query: 248 AMKPNTNTFNI---ALAGCLLFETTRKAEQLLDIMPRIGVKADSNLLIIMAHIYERNGRR 304
+ P+ TFN+ A A C + + KA + + M GVK D + R G+
Sbjct: 392 GIAPDFYTFNVLIKAYANCGMLD---KAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKM 448
Query: 305 EE-LRKLQRHIDEAVNLSDIQFRQFYNCLLSCHLKFGDLNSASKMVLEMLQRAKEARNSL 363
++ + K + ID+ V + YNCL+ G L A +++ E++ N +
Sbjct: 449 DDAMEKFNQMIDQGVAPD----KYAYNCLIQGFCTHGSLLKAKELISEIMN------NGM 498
Query: 364 AAAMLPFNAVGVNN-----RTPSEQNV-NCTNSVDLENSGIIENHILSYEDFTKDRKFVA 417
++ F+++ +NN R QN+ + T +V L ++ N ++
Sbjct: 499 HLDIVFFSSI-INNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDG---------YC 548
Query: 418 LEAEVKRVLQTLLGMLQKQVELITTEHGILQPTEKIYIKLVKAFLEAGKTKELTHFLIKA 477
L ++++ L+ M+ +E P Y LV + + G+
Sbjct: 549 LVGKMEKALRVFDAMVSAGIE----------PNVVGYGTLVNGYCKIGR----------- 587
Query: 478 EKENLQVSHDDAALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEAN 537
+D+ L EM G++ S+ +Y+ ++ EA
Sbjct: 588 --------------------------IDEGLSLFREMLQRGIKPSTILYSIIIDGLFEAG 621
Query: 538 RPREVTALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEF 597
R + +GI +D Y +L+ + A+ LFKE++ + +
Sbjct: 622 RTVPAKMKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNV-KINIITL 680
Query: 598 EMLVKGCAQNHEAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMR 657
++ G Q L + R+ V ++ +I K+ L+++AE M+
Sbjct: 681 NTMIDGMFQTRRVEEAKDLFASISR-SRLVPSVVTYSIMITNLIKEGLVEEAEDMFSSMQ 739
Query: 658 SLGHLPNAQTFHSMV 672
+ G PN++ + +V
Sbjct: 740 NAGCEPNSRLLNHVV 754
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 93/437 (21%), Positives = 167/437 (38%), Gaps = 47/437 (10%)
Query: 257 NIALAGCLL--FETTRKAEQLLDIM----PRIGVKADSNLLIIMAHIYERNGRREELRKL 310
NI +A LL F ++ ++ LDI+ P +G D I+ G+ + L
Sbjct: 148 NIIIANHLLEGFCEAKRTDEALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDL 207
Query: 311 QRHIDEAVNLSDIQFRQFYNCLLSCHLKFGDLNSASKMVLEMLQRAKE----ARNSLAAA 366
R + E + YN ++ K GD+N A + EM+QR NS+ A
Sbjct: 208 LRMMAEGGAVCSPNVVA-YNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHA 266
Query: 367 MLPFNAVGVNNRTPSEQNVNCTNSVDLENSGIIENHILSYEDFTKDRKFVALEAEVKRVL 426
+ A+ + N L N+ N I Y + ++ V + E++R
Sbjct: 267 LCKARAMDKAEAFLRQM----VNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRR-- 320
Query: 427 QTLLGMLQKQVELITTEHGILQPTEKIYIKLVKAFLEAGKTKELTHFL--IKAEKENLQV 484
H IL P L+ + + GK KE + + +N V
Sbjct: 321 -----------------HSIL-PDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDV 362
Query: 485 SHDDAALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTA 544
+ L T G L DL D M G+ + L+KAY +
Sbjct: 363 FSYNIMLNGYATK----GCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMI 418
Query: 545 LLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGC 604
+ + R G++ D Y ++ + A+ F +M + + + + L++G
Sbjct: 419 IFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYA-YNCLIQGF 477
Query: 605 AQNHEAGLMAK-LLQEV-KEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHL 662
H + L AK L+ E+ G +D + ++++I+ CK + DA+ ++G
Sbjct: 478 C-THGSLLKAKELISEIMNNGMHLD--IVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLH 534
Query: 663 PNAQTFHSMVTGYAAIG 679
P+A ++ ++ GY +G
Sbjct: 535 PDAVVYNMLMDGYCLVG 551
>gi|15221411|ref|NP_177623.1| plastid transcriptionally active 2 [Arabidopsis thaliana]
gi|75194055|sp|Q9S7Q2.1|PP124_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g74850, chloroplastic; AltName: Full=Protein PLASTID
TRANSCRIPTIONALLY ACTIVE 2; Flags: Precursor
gi|5882738|gb|AAD55291.1|AC008263_22 Contains 3 PF|01535 DUF17 domains [Arabidopsis thaliana]
gi|12323908|gb|AAG51934.1|AC013258_28 hypothetical protein; 81052-84129 [Arabidopsis thaliana]
gi|332197518|gb|AEE35639.1| plastid transcriptionally active 2 [Arabidopsis thaliana]
Length = 862
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/247 (23%), Positives = 105/247 (42%), Gaps = 11/247 (4%)
Query: 487 DDAALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALL 546
D H++ L L++ DLL EM G + Y LL+AY ++ +E +
Sbjct: 281 DLTTYSHLVETFGKLRRLEKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVF 340
Query: 547 RDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQ 606
++AG +A+ Y LL LF EMK S + +L++ +
Sbjct: 341 HQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDA-ATYNILIEVFGE 399
Query: 607 NHEAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQ 666
+ L ++ E + I+ + + +I K L +DA K L+ M + +P+++
Sbjct: 400 GGYFKEVVTLFHDMVE-ENIEPDMETYEGIIFACGKGGLHEDARKILQYMTANDIVPSSK 458
Query: 667 TFHSMVT--GYAAIGGKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARA 724
+ ++ G AA+ Y E + M S+ S+ E S+LY+F RGG +
Sbjct: 459 AYTGVIEAFGQAAL---YEEALVAFNTMHEVGSNPSI----ETFHSLLYSFARGGLVKES 511
Query: 725 NEVVAMM 731
+++ +
Sbjct: 512 EAILSRL 518
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 65/281 (23%), Positives = 114/281 (40%), Gaps = 50/281 (17%)
Query: 493 HVITLCISL----GWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANR---------- 538
H+ T+ ISL G LD+ ++ DEM GV S Y +L+ AY R
Sbjct: 142 HIYTIMISLLGREGLLDKCLEVFDEMPSQGVSRSVFSYTALINAYGRNGRYETSLELLDR 201
Query: 539 -------PREVT-------------------ALLRDARSAGIQLDASCYEALLQSKIVQK 572
P +T L + R GIQ D Y LL + ++
Sbjct: 202 MKNEKISPSILTYNTVINACARGGLDWEGLLGLFAEMRHEGIQPDIVTYNTLLSACAIRG 261
Query: 573 DTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRIDCGVHD 632
A +F+ M + I + LV+ + + LL E+ G + +
Sbjct: 262 LGDEAEMVFRTMNDGGIVPD-LTTYSHLVETFGKLRRLEKVCDLLGEMASGGSLP-DITS 319
Query: 633 WNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEM 692
+N ++ + K +++A +M++ G PNA T+ ++ + G+Y +V +L+ EM
Sbjct: 320 YNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQ-SGRYDDVRQLFLEM 378
Query: 693 KSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEE 733
K S++ + D + ++ F GG+F EVV + +
Sbjct: 379 K----SSNTDPDAATYNILIEVFGEGGYF---KEVVTLFHD 412
>gi|302794007|ref|XP_002978768.1| hypothetical protein SELMODRAFT_109608 [Selaginella moellendorffii]
gi|300153577|gb|EFJ20215.1| hypothetical protein SELMODRAFT_109608 [Selaginella moellendorffii]
Length = 713
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/141 (23%), Positives = 64/141 (45%), Gaps = 2/141 (1%)
Query: 449 PTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQAH 508
P E+ Y L + + AG ++ + +KENL + D A G ++ C G + +A
Sbjct: 479 PNERSYTALTEGYARAGDVEKAFGMFQRMKKENLAI--DIVAYGALLKACCKSGAMQRAV 536
Query: 509 DLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSK 568
++ ++ AG++ + Y ++L + + LL+D + G LD CY + +++
Sbjct: 537 EVFQQITDAGLKHNRITYCTMLDGWARKGELSKARDLLKDMQKHGFHLDTICYTSFIKAC 596
Query: 569 IVQKDTPGALHLFKEMKESKI 589
DT M+E K+
Sbjct: 597 FRSGDTEEVTETLAVMREKKL 617
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 64/334 (19%), Positives = 134/334 (40%), Gaps = 40/334 (11%)
Query: 447 LQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQ----------------------- 483
L P +Y +V+A+ +AG + + L + E+E Q
Sbjct: 232 LVPGGIVYNSIVQAYCQAGNMETVEALLAQMEEEGFQGNLGLYTTVLNGFAEIRDEEKCL 291
Query: 484 ----------VSHDDAALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAY 533
+S A G ++ L G + +A D+L+EM GV + +YA ++ Y
Sbjct: 292 SFFHRLKACGLSPTAATYGCIVKLFTKAGNMAKALDILEEMDKHGVSPNKMIYAMIMDGY 351
Query: 534 IEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSG 593
+ D SAG++ D Y L+ + AL + + ++ +++ +
Sbjct: 352 ARGGDFTAAFKVWEDMVSAGLKPDIVTYNILVHAFCKAGRMDKALGVLENIQANRLLPT- 410
Query: 594 HQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKAL 653
+ + ++ G + ++ +K + GV +N+++ K R M++A L
Sbjct: 411 IETYTSILDGYVKGGHIQKALEVFDRIKTAG-LRPGVVSYNSLLSGLAKARQMENARLML 469
Query: 654 KRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEMKSFASSTSMNFDEELLDSVLY 713
M + G +PN +++ ++ GYA G +V + +G + ++ D ++L
Sbjct: 470 DEMLANGVVPNERSYTALTEGYARAG----DVEKAFGMFQRM-KKENLAIDIVAYGALLK 524
Query: 714 TFVRGGFFARANEVVAMMEEGKMFIDKYKYRTLF 747
+ G RA EV + + + ++ Y T+
Sbjct: 525 ACCKSGAMQRAVEVFQQITDAGLKHNRITYCTML 558
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 79/351 (22%), Positives = 144/351 (41%), Gaps = 43/351 (12%)
Query: 248 AMKPNTNTFNIALAGCLLFETTRKAEQLLDIMPRIGVKADSNLLIIMAHIYERNGRREEL 307
+ PN + + + G A ++ + M G+K D I+ H + + GR ++
Sbjct: 336 GVSPNKMIYAMIMDGYARGGDFTAAFKVWEDMVSAGLKPDIVTYNILVHAFCKAGRMDKA 395
Query: 308 RKLQRHIDEAVNLSDIQFRQFYNCLLSCHLKFGDLNSASKMVLEMLQRAKEARNSLAAAM 367
+ +I L I+ Y +L ++K G + A LE+ R K A L +
Sbjct: 396 LGVLENIQANRLLPTIET---YTSILDGYVKGGHIQKA----LEVFDRIKTA--GLRPGV 446
Query: 368 LPFNAVGVNNRTPSEQNVNCTNSVDLENSGIIENHILSYEDFTKDRKFVALEAEVKRV-- 425
+ +N++ ++ + Q +EN+ ++ + +L+ +R + AL R
Sbjct: 447 VSYNSL-LSGLAKARQ---------MENARLMLDEMLANGVVPNERSYTALTEGYARAGD 496
Query: 426 LQTLLGMLQKQVELITTEHGILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVS 485
++ GM Q+ + E+ L Y L+KA ++G + Q++
Sbjct: 497 VEKAFGMFQR----MKKEN--LAIDIVAYGALLKACCKSGAMQRAVEVF-------QQIT 543
Query: 486 HDDAALGH-VITLCISL-GW-----LDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANR 538
DA L H IT C L GW L +A DLL +M G + Y S +KA +
Sbjct: 544 --DAGLKHNRITYCTMLDGWARKGELSKARDLLKDMQKHGFHLDTICYTSFIKACFRSGD 601
Query: 539 PREVTALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKI 589
EVT L R ++++A Y L+ + D A+ +++ K S +
Sbjct: 602 TEEVTETLAVMREKKLEVNARTYTTLIHGWLAAADPDQAISCYEQAKASGL 652
Score = 49.3 bits (116), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 56/249 (22%), Positives = 102/249 (40%), Gaps = 13/249 (5%)
Query: 507 AHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQ 566
A + M + ++ + +Y SL+ AY EA A + S GIQL+ + + +++
Sbjct: 150 ARATFEAMRASHIKPNVHIYTSLIHAYAEARDMEGAVACTEEMLSQGIQLNEAVFCSIIS 209
Query: 567 SKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRI 626
+ A H F++ K + G ++ C + + A L Q +EG +
Sbjct: 210 GYASAGNNEAAEHWFEKFKAENLVPGGIVYNSIVQAYCQAGNMETVEALLAQMEEEGFQG 269
Query: 627 DCGVHDWNNVIHFFCKKRLMQDAEKALK---RMRSLGHLPNAQTFHSMVTGYAAIGGKYT 683
+ G+ + V++ F + R D EK L R+++ G P A T+ +V + G
Sbjct: 270 NLGL--YTTVLNGFAEIR---DEEKCLSFFHRLKACGLSPTAATYGCIVKLFTK-AGNMA 323
Query: 684 EVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFIDKYKY 743
+ ++ EM S + ++D + RGG F A +V M + D Y
Sbjct: 324 KALDILEEMDKHGVSPNKMIYAMIMDG----YARGGDFTAAFKVWEDMVSAGLKPDIVTY 379
Query: 744 RTLFLKYHK 752
L + K
Sbjct: 380 NILVHAFCK 388
Score = 48.1 bits (113), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 59/324 (18%), Positives = 134/324 (41%), Gaps = 12/324 (3%)
Query: 426 LQTLLGMLQKQVELI--TTEHGILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQ 483
L T G + K ++++ +HG+ P + IY ++ + G F + + +
Sbjct: 315 LFTKAGNMAKALDILEEMDKHGV-SPNKMIYAMIMDGYARGGDFT--AAFKVWEDMVSAG 371
Query: 484 VSHDDAALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVT 543
+ D ++ G +D+A +L+ + + + Y S+L Y++ ++
Sbjct: 372 LKPDIVTYNILVHAFCKAGRMDKALGVLENIQANRLLPTIETYTSILDGYVKGGHIQKAL 431
Query: 544 ALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKG 603
+ ++AG++ Y +LL + A + EM + + + + + L +G
Sbjct: 432 EVFDRIKTAGLRPGVVSYNSLLSGLAKARQMENARLMLDEMLANGVVPN-ERSYTALTEG 490
Query: 604 CAQNHEAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLP 663
A+ + + Q +K+ + + + + ++ CK MQ A + +++ G
Sbjct: 491 YARAGDVEKAFGMFQRMKK-ENLAIDIVAYGALLKACCKSGAMQRAVEVFQQITDAGLKH 549
Query: 664 NAQTFHSMVTGYAAIGGKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFAR 723
N T+ +M+ G+A G+ ++ +L +M+ + D S + R G
Sbjct: 550 NRITYCTMLDGWAR-KGELSKARDLLKDMQKHG----FHLDTICYTSFIKACFRSGDTEE 604
Query: 724 ANEVVAMMEEGKMFIDKYKYRTLF 747
E +A+M E K+ ++ Y TL
Sbjct: 605 VTETLAVMREKKLEVNARTYTTLI 628
Score = 39.7 bits (91), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 61/139 (43%), Gaps = 6/139 (4%)
Query: 595 QEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALK 654
+E+ +LV A+ H + A+ E I VH + ++IH + + R M+ A +
Sbjct: 132 REYGLLVDFYAR-HGDKVAARATFEAMRASHIKPNVHIYTSLIHAYAEARDMEGAVACTE 190
Query: 655 RMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYT 714
M S G N F S+++GYA+ G E E W E + + +S++
Sbjct: 191 EMLSQGIQLNEAVFCSIISGYASAGN--NEAAEHWFEKFKAENLVPGGI---VYNSIVQA 245
Query: 715 FVRGGFFARANEVVAMMEE 733
+ + G ++A MEE
Sbjct: 246 YCQAGNMETVEALLAQMEE 264
>gi|357499975|ref|XP_003620276.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495291|gb|AES76494.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 590
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/307 (18%), Positives = 119/307 (38%), Gaps = 11/307 (3%)
Query: 447 LQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQ 506
+ P Y L+ F GK K+ K EN++ D ++ G + +
Sbjct: 256 ISPDVVTYSALISGFCILGKLKDAIDLFNKMILENIK--PDVYTFNILVNAFCKDGKMKE 313
Query: 507 AHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQ 566
+ D M G++ + Y SL+ Y + ++ G+ D Y ++
Sbjct: 314 GKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDIQSYSIMIN 373
Query: 567 SKIVQKDTPGALHLFKEM-KESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQR 625
K A++LFKEM +++ IP + L+ G +++ +L+ ++ + +
Sbjct: 374 GFCKIKKFDEAMNLFKEMHRKNIIPDV--VTYSSLIDGLSKSGRISYALQLVDQMHD-RG 430
Query: 626 IDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEV 685
+ + +N+++ CK + A L + + G P+ T+ ++ G GK +
Sbjct: 431 VPPNICTYNSILDALCKTHQVDKAIALLTKFKDKGFQPDISTYSILIKGLCQ-SGKLEDA 489
Query: 686 TELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFIDKYKYRT 745
+++ ++ N D ++ F G F A +++ ME+ D Y
Sbjct: 490 RKVFEDL----LVKGYNLDVYAYTIMIQGFCVEGLFNEALALLSKMEDNGCIPDAKTYEI 545
Query: 746 LFLKYHK 752
+ L K
Sbjct: 546 IILSLFK 552
Score = 48.9 bits (115), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 49/233 (21%), Positives = 92/233 (39%), Gaps = 41/233 (17%)
Query: 441 TTEHGILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCIS 500
T G + P + Y ++ F + K E + + ++N + D +I
Sbjct: 355 TMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKN--IIPDVVTYSSLIDGLSK 412
Query: 501 LGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASC 560
G + A L+D+MH GV + Y S+L A + ++ + ALL + G Q D S
Sbjct: 413 SGRISYALQLVDQMHDRGVPPNICTYNSILDALCKTHQVDKAIALLTKFKDKGFQPDIST 472
Query: 561 YEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQE- 619
Y +L+KG Q+ + K+ ++
Sbjct: 473 Y------------------------------------SILIKGLCQSGKLEDARKVFEDL 496
Query: 620 VKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMV 672
+ +G +D V+ + +I FC + L +A L +M G +P+A+T+ ++
Sbjct: 497 LVKGYNLD--VYAYTIMIQGFCVEGLFNEALALLSKMEDNGCIPDAKTYEIII 547
Score = 44.7 bits (104), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 41/183 (22%), Positives = 72/183 (39%), Gaps = 5/183 (2%)
Query: 497 LCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQL 556
LC+ G + QA D++ G Y +L+ + R LL+ +Q
Sbjct: 165 LCLK-GQIQQAFLFHDKVVALGFHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQP 223
Query: 557 DASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKG-CAQNHEAGLMAK 615
+ Y ++ S K A LF EM I + L+ G C +
Sbjct: 224 NVVMYNTIIDSMCKVKLVNEAFDLFSEMVSKGI-SPDVVTYSALISGFCILGKLKDAIDL 282
Query: 616 LLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGY 675
+ + E + D V+ +N +++ FCK M++ + M G PN T++S++ GY
Sbjct: 283 FNKMILENIKPD--VYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGY 340
Query: 676 AAI 678
+
Sbjct: 341 CLV 343
>gi|302816541|ref|XP_002989949.1| hypothetical protein SELMODRAFT_130917 [Selaginella moellendorffii]
gi|300142260|gb|EFJ08962.1| hypothetical protein SELMODRAFT_130917 [Selaginella moellendorffii]
Length = 447
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 62/281 (22%), Positives = 121/281 (43%), Gaps = 21/281 (7%)
Query: 445 GILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWL 504
G+ P Y L++ F + G+ + + L + + ++ LC +G +
Sbjct: 19 GLFAPNAHTYNVLIRGFCKGGQMHQAVSVFSDMKSSGL-LPNASTMNTLLLGLC-EIGQM 76
Query: 505 DQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEAL 564
A L EM +S+ + LL+ + A R E ++ +++G++ D Y L
Sbjct: 77 SSALKLFREMQAGPFLPTSASHNILLRGFFMAGRAIE---FFKEMKASGVEPDLESYHIL 133
Query: 565 LQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKG-C--AQNHEA-GLMAKLLQEV 620
L + A LF M S + + +L+ G C Q +EA LM ++L+
Sbjct: 134 LSALSDSGRMAEAHALFSAMTCSPDIMT----YNVLMDGYCKIGQTYEAQSLMKEILKAG 189
Query: 621 KEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGG 680
E V ++ +I+ +CK +++A + +M +PNA TF++++ G+ G
Sbjct: 190 YEPN-----VFTYSIIINCYCKLDKVEEAWEVFMKMIESNCVPNAVTFNTLIAGFCK-AG 243
Query: 681 KYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFF 721
+ +L+ EM+ ++ L+DS+ RGG +
Sbjct: 244 MLEDAIKLFAEMEKIGCKATIVTYNTLIDSLCKK--RGGVY 282
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 59/240 (24%), Positives = 96/240 (40%), Gaps = 26/240 (10%)
Query: 449 PTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVI-TLCISLGWLDQA 507
P + L+ F +AG ++ AE E + +I +LC G + A
Sbjct: 227 PNAVTFNTLIAGFCKAGMLEDAIKLF--AEMEKIGCKATIVTYNTLIDSLCKKRGGVYTA 284
Query: 508 HDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQS 567
DL +++ AG+ + Y SL++ + E R + LL + G + D Y L+
Sbjct: 285 VDLFNKLEGAGLTPTIVTYNSLIQGFSE--RANDGLRLLCHMHAEGCKPDVITYNCLISG 342
Query: 568 KIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKG-CAQNHEAGLMAKLLQEVKEGQRI 626
A LF M + P F L++G CAQ ++V+E + I
Sbjct: 343 LCSANRVEDAQRLFNGMACA--PNV--TTFNFLIRGLCAQ-----------KKVEEARNI 387
Query: 627 -----DCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGK 681
+ +N +I FCK M DA + +K M G PN T +++ G + GK
Sbjct: 388 LDRMTAPDMTTFNTIILAFCKAGAMHDAREVMKDMLKHGFYPNTYTTYALAHGIQSSKGK 447
Score = 43.9 bits (102), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 46/90 (51%), Gaps = 4/90 (4%)
Query: 605 AQNHEAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPN 664
A+ H+ L +L +EV G H +N +I FCK M A M+S G LPN
Sbjct: 3 ARKHDQAL--RLFKEVLAGLFAP-NAHTYNVLIRGFCKGGQMHQAVSVFSDMKSSGLLPN 59
Query: 665 AQTFHSMVTGYAAIGGKYTEVTELWGEMKS 694
A T ++++ G I G+ + +L+ EM++
Sbjct: 60 ASTMNTLLLGLCEI-GQMSSALKLFREMQA 88
Score = 42.4 bits (98), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 60/260 (23%), Positives = 108/260 (41%), Gaps = 40/260 (15%)
Query: 505 DQAHDLLDEMHLAGVRASSS-VYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEA 563
DQA L E+ LAG+ A ++ Y L++ + + + + ++ D +S+G+ +AS
Sbjct: 7 DQALRLFKEV-LAGLFAPNAHTYNVLIRGFCKGGQMHQAVSVFSDMKSSGLLPNASTMNT 65
Query: 564 LLQSKIVQKDTPGALHLFKEMKESK-IPRSGHQ--------------EF--EMLVKGCAQ 606
LL AL LF+EM+ +P S EF EM G
Sbjct: 66 LLLGLCEIGQMSSALKLFREMQAGPFLPTSASHNILLRGFFMAGRAIEFFKEMKASGVEP 125
Query: 607 NHEAGLMAKLLQEVKEGQR----------IDCG--VHDWNNVIHFFCKKRLMQDAEKALK 654
+ E+ + LL + + R + C + +N ++ +CK +A+ +K
Sbjct: 126 DLESYHI--LLSALSDSGRMAEAHALFSAMTCSPDIMTYNVLMDGYCKIGQTYEAQSLMK 183
Query: 655 RMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGE-MKSFASSTSMNFDEELLDSVLY 713
+ G+ PN T+ ++ Y K +V E W MK S+ N ++++
Sbjct: 184 EILKAGYEPNVFTYSIIINCYC----KLDKVEEAWEVFMKMIESNCVPN--AVTFNTLIA 237
Query: 714 TFVRGGFFARANEVVAMMEE 733
F + G A ++ A ME+
Sbjct: 238 GFCKAGMLEDAIKLFAEMEK 257
>gi|410109867|gb|AFV61013.1| pentatricopeptide repeat-containing protein 11, partial
[Acantholippia salsoloides]
Length = 410
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/228 (22%), Positives = 93/228 (40%), Gaps = 12/228 (5%)
Query: 502 GWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCY 561
G + A + D + G+R S + +L+ YI E L ++G++ D Y
Sbjct: 142 GEIRVARSVFDAITKWGLRPSVVSFNTLMNGYIRLGDLDEGFRLKSAMHASGVEPDVYTY 201
Query: 562 EALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVK 621
L+ + GA LF EM + + +G F L+ G +N L ++ +++
Sbjct: 202 SVLINGLCKESKIDGANELFDEMLDKGLVPNG-VTFTTLIDGHCKNGRVDLAMEIYKQML 260
Query: 622 EGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGK 681
Q + + +N +I+ CKK ++ A+ + MR G P+ T+ +++ G G
Sbjct: 261 S-QSLSADLITYNTLIYGLCKKGDLKQAQNLIDEMRMKGLKPDKITYTTLIDGCCKEGDL 319
Query: 682 YTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVA 729
T +F M + LD V+YT + G V A
Sbjct: 320 ET----------AFEHRKRMIQENIRLDDVVYTTLISGLCQEGRSVDA 357
Score = 48.9 bits (115), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 51/240 (21%), Positives = 97/240 (40%), Gaps = 10/240 (4%)
Query: 447 LQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQ 506
L+P+ + L+ ++ G E F +K+ V D +I +D
Sbjct: 159 LRPSVVSFNTLMNGYIRLGDLDE--GFRLKSAMHASGVEPDVYTYSVLINGLCKESKIDG 216
Query: 507 AHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQ 566
A++L DEM G+ + + +L+ + + R + + S + D Y L+
Sbjct: 217 ANELFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSADLITYNTLIY 276
Query: 567 SKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQE---VKEG 623
+ D A +L EM+ + + + L+ GC + E L ++E
Sbjct: 277 GLCKKGDLKQAQNLIDEMRMKGL-KPDKITYTTLIDGCCK--EGDLETAFEHRKRMIQEN 333
Query: 624 QRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYT 683
R+D V + +I C++ DAEK L+ M S+G P+ T+ ++ + G +T
Sbjct: 334 IRLDDVV--YTTLISGLCQEGRSVDAEKMLREMLSVGLKPDTGTYTMIINEFCKKGDVWT 391
Score = 47.4 bits (111), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 72/167 (43%), Gaps = 4/167 (2%)
Query: 502 GWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCY 561
G +D A ++ +M + A Y +L+ + ++ L+ + R G++ D Y
Sbjct: 247 GRVDLAMEIYKQMLSQSLSADLITYNTLIYGLCKKGDLKQAQNLIDEMRMKGLKPDKITY 306
Query: 562 EALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQE-V 620
L+ + D A K M + I R + L+ G Q + K+L+E +
Sbjct: 307 TTLIDGCCKEGDLETAFEHRKRMIQENI-RLDDVVYTTLISGLCQEGRSVDAEKMLREML 365
Query: 621 KEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQT 667
G + D G + +I+ FCKK + K LK M+ GH+P+ T
Sbjct: 366 SVGLKPDTGT--YTMIINEFCKKGDVWTGSKLLKEMQRDGHVPSVVT 410
>gi|414883768|tpg|DAA59782.1| TPA: hypothetical protein ZEAMMB73_461975 [Zea mays]
Length = 683
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 72/321 (22%), Positives = 128/321 (39%), Gaps = 29/321 (9%)
Query: 444 HGILQPTEKIYIKLVKAFLEAGKTKE----LTHFLIKAEKENLQVSHDDAALGHVITLCI 499
HG + P +Y ++ A + G E L L+ ++ +D V+ LC
Sbjct: 206 HGCV-PDAVLYQTVIHALVAQGGVAEAAMLLDEMLLMGCAADVNTFND-----LVLGLC- 258
Query: 500 SLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALL-RDARSAGIQLDA 558
LG + +A L+D M G S Y LL+ + E A+L R + L+
Sbjct: 259 GLGRVREAARLVDRMMTQGCMPSVVTYGFLLQGLCRTRQADEACAMLGRLPEVNVVMLNT 318
Query: 559 SCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQ 618
L + K+ + A L++ M P H + +L+ G + G ++L
Sbjct: 319 VIRGCLTEGKLAR-----ATELYEMMGSKGCPPDVHT-YSILMHGLCKLGRFGSAVRMLD 372
Query: 619 EVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAI 678
E++E + + ++ ++H FC+ + DA L +M + G N+Q ++ ++ YA
Sbjct: 373 EMEE-KGCAPNIVTYSTLLHSFCRNGMWDDARAMLDQMLAKGFSMNSQGYNGII--YALC 429
Query: 679 -GGKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMF 737
GK + T L EMKS D ++++Y A + + E +
Sbjct: 430 KDGKLDQATRLVQEMKSQGCKP----DICTYNTMIYHLCNNDLMEEAEHIFRNLIEEGVV 485
Query: 738 IDKYKYRTLFLKYHKTLYKGK 758
+ Y TL H L G+
Sbjct: 486 ANGITYNTLI---HALLRNGR 503
Score = 44.3 bits (103), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 48/213 (22%), Positives = 87/213 (40%), Gaps = 37/213 (17%)
Query: 502 GWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCY 561
G D A +LD+M G +S Y ++ A + + + T L+++ +S G + D Y
Sbjct: 397 GMWDDARAMLDQMLAKGFSMNSQGYNGIIYALCKDGKLDQATRLVQEMKSQGCKPDICTY 456
Query: 562 EALLQSKIVQKDTPGALHLFKEMKESKIPRSG---------------HQE-----FEMLV 601
++ A H+F+ + E + +G QE EML+
Sbjct: 457 NTMIYHLCNNDLMEEAEHIFRNLIEEGVVANGITYNTLIHALLRNGRWQEGLRLASEMLL 516
Query: 602 KGCAQN--HEAGLMAKLLQE-------------VKEGQRIDCGVHDWNNVIHFFCKKRLM 646
GC + GL+ L +E V +G I +N +I+ CK +
Sbjct: 517 HGCQLDVISYNGLIKALCKEGNVDRSMALLEEMVTKG--IKPNNFSYNMLINELCKAGKV 574
Query: 647 QDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIG 679
+DA + K M + G P+ T+++++ G +G
Sbjct: 575 RDALELSKEMLNQGLTPDIVTYNTLINGLCKVG 607
Score = 43.9 bits (102), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 69/166 (41%), Gaps = 2/166 (1%)
Query: 510 LLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKI 569
L EM L G + Y L+KA + ALL + + GI+ + Y L+
Sbjct: 510 LASEMLLHGCQLDVISYNGLIKALCKEGNVDRSMALLEEMVTKGIKPNNFSYNMLINELC 569
Query: 570 VQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRIDCG 629
AL L KEM + + L+ G + LL+++ + +
Sbjct: 570 KAGKVRDALELSKEMLNQGLT-PDIVTYNTLINGLCKVGWTHAALNLLEKLPN-ENVHPD 627
Query: 630 VHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGY 675
+ +N +I + CK RL+ DA L + S G +PN +T+ MV +
Sbjct: 628 IVTYNILISWHCKVRLLDDAAMLLDKAISGGIVPNERTWGMMVQNF 673
>gi|294461967|gb|ADE76539.1| unknown [Picea sitchensis]
Length = 486
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/249 (23%), Positives = 108/249 (43%), Gaps = 13/249 (5%)
Query: 450 TEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAA--LGHVITLCISLGWLDQA 507
T +++ +++ + E G E IKA + L+ ++ A ++ + I L+ A
Sbjct: 167 TPGLFVDIIEIYGEVGMPNEA----IKAFHQMLEFGYEPLAKHFNVLLIVLIEHKCLETA 222
Query: 508 HDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQS 567
L ++H G+ ++ Y L++A+ +++ L G D Y L+Q
Sbjct: 223 LSLFKKLHEFGISPNTRTYNILIRAHCHSDKLSHAYFLFNKMHKQGCIPDVETYSILMQG 282
Query: 568 KIVQKDTPGALHLFKEM-KESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVK-EGQR 625
+ AL + EM + +P + + L+ + +LL ++K G
Sbjct: 283 LCRKSQVKTALGVLDEMLNKGYVPDA--LTYNTLLNSLCRKMNLREAYRLLSKMKVMGCN 340
Query: 626 IDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEV 685
D V ++N VI FC++ DA + L+ M G LPNA ++ ++V G GK+ E
Sbjct: 341 PD--VINYNTVITGFCREGRALDACQILRDMPENGCLPNALSYRTLVNGLCN-EGKFDEA 397
Query: 686 TELWGEMKS 694
+ EM S
Sbjct: 398 KDFVEEMIS 406
>gi|297840249|ref|XP_002888006.1| binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297333847|gb|EFH64265.1| binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 485
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/233 (21%), Positives = 95/233 (40%), Gaps = 13/233 (5%)
Query: 447 LQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGH---VITLCISLGW 503
+ P + L+ AF+ GK E F +E ++ D + + LC+ G
Sbjct: 240 IVPNVITFTALINAFVREGKFLEAKKFY----EEMIRRCIDPDVFTYNSMIHGLCMH-GQ 294
Query: 504 LDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEA 563
+D+A +LD M G Y +L+ + + R E T L+R+ G+ +D +
Sbjct: 295 VDEAKQILDLMVTKGCFPDVVTYNTLINGFCKTKRVDEGTKLVREMSQRGLVVDTVTFNT 354
Query: 564 LLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEG 623
++Q A +F M R + + +L+ G N A +L E +
Sbjct: 355 IIQGYFQAGRPDAAQEIFSRMGS----RPNIRTYSILLYGLCYNWRVE-KALVLFESMQK 409
Query: 624 QRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYA 676
++ + +N VIH C ++DA + G P+ T+ +M++G+
Sbjct: 410 SEMELDITTYNIVIHGMCMIGNVEDAWDLFCSLSFKGLEPDVVTYTTMISGFC 462
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 55/249 (22%), Positives = 100/249 (40%), Gaps = 9/249 (3%)
Query: 448 QPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQA 507
+P L+ F + + + K E+ ++ D +I G ++ A
Sbjct: 136 EPDVVTVSSLINGFCQGNRVFGAVDLVSKMEE--MRCKLDVVIYNTIIDGFCKTGLVNNA 193
Query: 508 HDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQS 567
L M GVRA + Y SL+ + R + L+RD I + + AL+ +
Sbjct: 194 LVLFGRMERDGVRADTVTYNSLVTGLCCSGRRSDAARLMRDMVMRDIVPNVITFTALINA 253
Query: 568 KIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGC--AQNHEAGLMAKLLQEVKEGQR 625
+ + A ++EM I M+ C Q EA + L+ V +G
Sbjct: 254 FVREGKFLEAKKFYEEMIRRCIDPDVFTYNSMIHGLCMHGQVDEAKQILDLM--VTKGCF 311
Query: 626 IDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEV 685
D V +N +I+ FCK + + + K ++ M G + + TF++++ GY G+
Sbjct: 312 PD--VVTYNTLINGFCKTKRVDEGTKLVREMSQRGLVVDTVTFNTIIQGYFQ-AGRPDAA 368
Query: 686 TELWGEMKS 694
E++ M S
Sbjct: 369 QEIFSRMGS 377
>gi|15218855|ref|NP_171855.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75180297|sp|Q9LR67.1|PPR9_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g03560, mitochondrial; Flags: Precursor
gi|9280662|gb|AAF86531.1|AC002560_24 F21B7.18 [Arabidopsis thaliana]
gi|332189465|gb|AEE27586.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 660
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 60/301 (19%), Positives = 126/301 (41%), Gaps = 14/301 (4%)
Query: 457 LVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQAHDLLDEMHL 516
L+K+F + G +EL K ++ ++ + ++ +S ++D A + + M
Sbjct: 193 LIKSFGKLGMVEELLWVWRKMKENGIEPTL--YTYNFLMNGLVSAMFVDSAERVFEVMES 250
Query: 517 AGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQKDTPG 576
++ Y +++K Y +A + ++ LRD + G + D Y ++Q+ D
Sbjct: 251 GRIKPDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQACYADSDFGS 310
Query: 577 ALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQE-VKEGQRIDCGVHDWNN 635
+ L++EM E I H F +++ G + + + + +++G + + + +
Sbjct: 311 CVALYQEMDEKGIQVPPHA-FSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAI--YTV 367
Query: 636 VIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEMKSF 695
+I + K ++DA + L RM G P+ T+ +V G G+ E + + +
Sbjct: 368 LIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCK-NGRVEEALDYFHTCRFD 426
Query: 696 ASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFIDKYKYRTL---FLKYHK 752
+ + F L+D + + G A + M E D Y Y L F K+ K
Sbjct: 427 GLAINSMFYSSLIDGL----GKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHRK 482
Query: 753 T 753
Sbjct: 483 V 483
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/161 (22%), Positives = 66/161 (40%), Gaps = 2/161 (1%)
Query: 448 QPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQA 507
+P IY L+ + ++G ++ L + E + D V+ G +++A
Sbjct: 359 KPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFK--PDVVTYSVVVNGLCKNGRVEEA 416
Query: 508 HDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQS 567
D G+ +S Y+SL+ +A R E L + G D+ CY AL+ +
Sbjct: 417 LDYFHTCRFDGLAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDA 476
Query: 568 KIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNH 608
+ A+ LFK M+E + + +L+ G + H
Sbjct: 477 FTKHRKVDEAIALFKRMEEEEGCDQTVYTYTILLSGMFKEH 517
>gi|410109893|gb|AFV61026.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
fucata]
Length = 414
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/234 (22%), Positives = 100/234 (42%), Gaps = 6/234 (2%)
Query: 447 LQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQ 506
L+P+ Y L+ ++ G E F +K+ V D +I +D
Sbjct: 156 LRPSVVSYNTLMNGYIRLGDLDE--GFRLKSAMLASGVQPDVYTYSVLINGLCKESKIDD 213
Query: 507 AHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQ 566
A++L DEM + G+ +S + +L+ + + R + + S + D Y L+
Sbjct: 214 ANELFDEMLVKGLVPNSVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIY 273
Query: 567 SKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQE-VKEGQR 625
+ D A HL EM + + + L+ GC ++ + + + ++E R
Sbjct: 274 GLCKKGDLKQAHHLIDEMSMKGL-KPDKITYTTLIDGCCKDGDLDTAFEHRKRMIQENTR 332
Query: 626 IDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIG 679
+D V + +I C++ DAEK L+ M S+G P+A+T+ ++ + G
Sbjct: 333 LDDVV--YTALISGLCREGXSVDAEKMLREMLSVGLKPDARTYTMIINEFCKKG 384
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/224 (23%), Positives = 88/224 (39%), Gaps = 14/224 (6%)
Query: 507 AHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQ 566
A + D + G+R S Y +L+ YI E L ++G+Q D Y L+
Sbjct: 144 AQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLIN 203
Query: 567 SKIVQKDTPGALHLFKEM-KESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQR 625
+ A LF EM + +P S F L+ G +N L ++ +++ Q
Sbjct: 204 GLCKESKIDDANELFDEMLVKGLVPNS--VTFTTLIDGHCKNGRVDLAMEIYKQMLS-QS 260
Query: 626 IDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEV 685
+ + +N +I+ CKK ++ A + M G P+ T+ +++ G G T
Sbjct: 261 LSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSMKGLKPDKITYTTLIDGCCKDGDLDT-- 318
Query: 686 TELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVA 729
+F M + LD V+YT + G V A
Sbjct: 319 --------AFEHRKRMIQENTRLDDVVYTALISGLCREGXSVDA 354
Score = 41.2 bits (95), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 28/117 (23%), Positives = 58/117 (49%), Gaps = 5/117 (4%)
Query: 630 VHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELW 689
V+ ++ +I+ CK+ + DA + M G +PN+ TF +++ G+ G+ E++
Sbjct: 195 VYTYSVLINGLCKESKIDDANELFDEMLVKGLVPNSVTFTTLIDGHCK-NGRVDLAMEIY 253
Query: 690 GEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFIDKYKYRTL 746
+M S S++ D ++++Y + G +A+ ++ M + DK Y TL
Sbjct: 254 KQM----LSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSMKGLKPDKITYTTL 306
>gi|356524104|ref|XP_003530672.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
mitochondrial-like [Glycine max]
Length = 742
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/233 (21%), Positives = 96/233 (41%), Gaps = 4/233 (1%)
Query: 447 LQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQ 506
L+P + Y ++ + G+ E L +N ++ D+ +I+ G +
Sbjct: 318 LKPNQYTYNSIISFLCKTGRVVEAEQVL--RVMKNQRIFPDNVVYTTLISGFGKSGNVSV 375
Query: 507 AHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQ 566
+ L DEM + Y S++ +A + E L + S G++ D Y AL+
Sbjct: 376 EYKLFDEMKRKKIVPDFVTYTSMIHGLCQAGKVVEARKLFSEMLSKGLKPDEVTYTALID 435
Query: 567 SKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRI 626
+ A L +M E + + LV G + E + +LL E+ E + +
Sbjct: 436 GYCKAGEMKEAFSLHNQMVEKGLT-PNVVTYTALVDGLCKCGEVDIANELLHEMSE-KGL 493
Query: 627 DCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIG 679
V +N +I+ CK ++ A K ++ M G P+ T+ +++ Y +G
Sbjct: 494 QPNVCTYNALINGLCKVGNIEQAVKLMEEMDLAGFFPDTITYTTIMDAYCKMG 546
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/209 (20%), Positives = 90/209 (43%), Gaps = 2/209 (0%)
Query: 471 THFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLL 530
T F + E + V + + ++ L LG + +AH LL +M G Y+ ++
Sbjct: 235 TAFRVFREYSEVGVCWNTVSYNIILHLLCQLGKVKEAHSLLIQMEFRGNVPDVVSYSVIV 294
Query: 531 KAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIP 590
Y + + +V L+ + + G++ + Y +++ A + + MK +I
Sbjct: 295 DGYCQVEQLGKVLKLMEELQRKGLKPNQYTYNSIISFLCKTGRVVEAEQVLRVMKNQRI- 353
Query: 591 RSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAE 650
+ + L+ G ++ + KL E+K ++I + ++IH C+ + +A
Sbjct: 354 FPDNVVYTTLISGFGKSGNVSVEYKLFDEMKR-KKIVPDFVTYTSMIHGLCQAGKVVEAR 412
Query: 651 KALKRMRSLGHLPNAQTFHSMVTGYAAIG 679
K M S G P+ T+ +++ GY G
Sbjct: 413 KLFSEMLSKGLKPDEVTYTALIDGYCKAG 441
Score = 52.8 bits (125), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 56/251 (22%), Positives = 103/251 (41%), Gaps = 11/251 (4%)
Query: 447 LQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQ 506
L P Y LV + G+ L + ++ LQ + +I +G ++Q
Sbjct: 458 LTPNVVTYTALVDGLCKCGEVDIANELLHEMSEKGLQ--PNVCTYNALINGLCKVGNIEQ 515
Query: 507 AHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQ 566
A L++EM LAG + Y +++ AY + + LLR G+Q + L+
Sbjct: 516 AVKLMEEMDLAGFFPDTITYTTIMDAYCKMGEMAKAHELLRIMLDKGLQPTIVTFNVLMN 575
Query: 567 SKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRI 626
+ L K M + I + ++ + C +N+ + E+ +G
Sbjct: 576 GFCMSGMLEDGERLIKWMLDKGIMPNATTFNSLMKQYCIRNNMRATI-----EIYKGMHA 630
Query: 627 DCGVHD---WNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYT 683
V D +N +I CK R M++A K M G A +++S++ G+ K+
Sbjct: 631 QGVVPDTNTYNILIKGHCKARNMKEAWFLHKEMVEKGFSLTAASYNSLIKGFYK-RKKFE 689
Query: 684 EVTELWGEMKS 694
E +L+ EM++
Sbjct: 690 EARKLFEEMRT 700
Score = 49.7 bits (117), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 48/230 (20%), Positives = 93/230 (40%), Gaps = 8/230 (3%)
Query: 449 PTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQAH 508
P Y ++ +AGK E + + L+ D+ +I G + +A
Sbjct: 390 PDFVTYTSMIHGLCQAGKVVEARKLFSEMLSKGLK--PDEVTYTALIDGYCKAGEMKEAF 447
Query: 509 DLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSK 568
L ++M G+ + Y +L+ + LL + G+Q + Y AL+
Sbjct: 448 SLHNQMVEKGLTPNVVTYTALVDGLCKCGEVDIANELLHEMSEKGLQPNVCTYNALINGL 507
Query: 569 IVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKL--LQEVKEGQRI 626
+ A+ L +EM + ++ C + G MAK L + + +
Sbjct: 508 CKVGNIEQAVKLMEEMDLAGFFPDTITYTTIMDAYC----KMGEMAKAHELLRIMLDKGL 563
Query: 627 DCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYA 676
+ +N +++ FC +++D E+ +K M G +PNA TF+S++ Y
Sbjct: 564 QPTIVTFNVLMNGFCMSGMLEDGERLIKWMLDKGIMPNATTFNSLMKQYC 613
Score = 45.8 bits (107), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 47/211 (22%), Positives = 92/211 (43%), Gaps = 12/211 (5%)
Query: 499 ISLGWLDQAHDLLDEMHLAGVRAS-SSVYASLLKAYIEANRPREVTALLRDARSAGIQLD 557
+ G L +A L D++ GV S S L + + R + R+ G+ +
Sbjct: 192 VEAGLLLEAGKLFDKLLNYGVLVSVDSCNLFLARLSNSFDGIRTAFRVFREYSEVGVCWN 251
Query: 558 ASCYEALLQSKIVQKDTPGALHLFKEMK-ESKIPRSGHQEFEMLVKGCAQNHEAGLMAKL 616
Y +L A L +M+ +P + ++V G Q + G + KL
Sbjct: 252 TVSYNIILHLLCQLGKVKEAHSLLIQMEFRGNVPDV--VSYSVIVDGYCQVEQLGKVLKL 309
Query: 617 LQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYA 676
++E++ + + + +N++I F CK + +AE+ L+ M++ P+ + ++++G+
Sbjct: 310 MEELQR-KGLKPNQYTYNSIISFLCKTGRVVEAEQVLRVMKNQRIFPDNVVYTTLISGFG 368
Query: 677 AIGGKYTEVTELWGEMK------SFASSTSM 701
G E +L+ EMK F + TSM
Sbjct: 369 KSGNVSVEY-KLFDEMKRKKIVPDFVTYTSM 398
Score = 39.3 bits (90), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 25/121 (20%), Positives = 60/121 (49%), Gaps = 5/121 (4%)
Query: 633 WNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEM 692
+N ++H C+ +++A L +M G++P+ ++ +V GY + + +V +L E+
Sbjct: 255 YNIILHLLCQLGKVKEAHSLLIQMEFRGNVPDVVSYSVIVDGYCQV-EQLGKVLKLMEEL 313
Query: 693 KSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFIDKYKYRTLFLKYHK 752
+ + ++ +S++ + G A +V+ +M+ ++F D Y TL + K
Sbjct: 314 Q----RKGLKPNQYTYNSIISFLCKTGRVVEAEQVLRVMKNQRIFPDNVVYTTLISGFGK 369
Query: 753 T 753
+
Sbjct: 370 S 370
>gi|224080263|ref|XP_002306075.1| predicted protein [Populus trichocarpa]
gi|222849039|gb|EEE86586.1| predicted protein [Populus trichocarpa]
Length = 498
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/233 (19%), Positives = 96/233 (41%), Gaps = 3/233 (1%)
Query: 447 LQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQ 506
++P + +L+ F G+ + + I +E E + + G +I + G L +
Sbjct: 243 VRPNVHSFNELMVGFYRNGEVEMVEE--IWSEMERFGCVANGFSYGVLIAVFCEGGRLSE 300
Query: 507 AHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQ 566
A L DEM + G+ Y +++ + +A + L R+ +GI+ +E L++
Sbjct: 301 AERLWDEMRVKGIMPDVVAYNTIIGGFCKAGEVEKAEGLFREMGLSGIESSCVTFEHLIE 360
Query: 567 SKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRI 626
D A+ ++K+M+ R E+L+ G + K+++
Sbjct: 361 GYCRIGDVNSAILVYKDMRRRDF-RLEALTMEVLIGGLCEQKRVFEALKIMRSAMRDVSF 419
Query: 627 DCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIG 679
+ +I+ C+ M++A K M G PN+ + + + GY +G
Sbjct: 420 HPNGKSYELLINGLCEDGKMEEALKLQSEMVGKGFDPNSAIYGAFIEGYVKLG 472
>gi|15237662|ref|NP_201237.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171655|sp|Q9FMF6.1|PP444_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g64320, mitochondrial; Flags: Precursor
gi|9759408|dbj|BAB09863.1| unnamed protein product [Arabidopsis thaliana]
gi|332010486|gb|AED97869.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 730
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/236 (22%), Positives = 96/236 (40%), Gaps = 12/236 (5%)
Query: 448 QPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQA 507
+P Y LV F + GK E + L + + L+ + +I+ + +A
Sbjct: 421 KPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLK--PNTVGFNCLISAFCKEHRIPEA 478
Query: 508 HDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQS 567
++ EM G + + SL+ E + + LLRD S G+ + Y L+ +
Sbjct: 479 VEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINA 538
Query: 568 KIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEA----GLMAKLLQEVKEG 623
+ + + A L EM P + L+KG + E L K+L++
Sbjct: 539 FLRRGEIKEARKLVNEMVFQGSPLD-EITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAP 597
Query: 624 QRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIG 679
I C N +I+ C+ ++++A + K M G P+ TF+S++ G G
Sbjct: 598 SNISC-----NILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAG 648
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/193 (21%), Positives = 86/193 (44%), Gaps = 5/193 (2%)
Query: 501 LGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASC 560
LG +D+A+++L+EM G++ ++ + L+ A+ + +R E + R+ G + D
Sbjct: 437 LGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYT 496
Query: 561 YEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQE- 619
+ +L+ + AL L ++M + + + L+ + E KL+ E
Sbjct: 497 FNSLISGLCEVDEIKHALWLLRDMISEGVV-ANTVTYNTLINAFLRRGEIKEARKLVNEM 555
Query: 620 VKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIG 679
V +G +D +N++I C+ + A ++M GH P+ + + ++ G
Sbjct: 556 VFQGSPLD--EITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCR-S 612
Query: 680 GKYTEVTELWGEM 692
G E E EM
Sbjct: 613 GMVEEAVEFQKEM 625
Score = 46.2 bits (108), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 80/167 (47%), Gaps = 5/167 (2%)
Query: 510 LLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSA-GIQLDASCYEALLQSK 568
LL +M G+ S++ S+++ Y +A P + T L+ + R+ + Y +L+
Sbjct: 133 LLIQMKDEGIVFKESLFISIMRDYDKAGFPGQTTRLMLEMRNVYSCEPTFKSYNVVLEIL 192
Query: 569 IVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKG-CAQNHEAGLMAKLLQEVKEGQRID 627
+ A ++F +M KIP + F +++K CA N ++ L K G +
Sbjct: 193 VSGNCHKVAANVFYDMLSRKIPPTLFT-FGVVMKAFCAVNEIDSALSLLRDMTKHGCVPN 251
Query: 628 CGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTG 674
+ + +IH K + +A + L+ M +G +P+A+TF+ ++ G
Sbjct: 252 SVI--YQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILG 296
Score = 45.4 bits (106), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 47/235 (20%), Positives = 104/235 (44%), Gaps = 20/235 (8%)
Query: 447 LQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQ 506
L+P + L+ AF + + E + ++ + D +I+ + +
Sbjct: 455 LKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCK--PDVYTFNSLISGLCEVDEIKH 512
Query: 507 AHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQ 566
A LL +M GV A++ Y +L+ A++ +E L+ + G LD Y +L++
Sbjct: 513 ALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIK 572
Query: 567 SKIVQKDTPGALHLFKEMKESKIPRSGHQ----EFEMLVKGCAQNHEAGLMAKLLQEVKE 622
+ A LF++M R GH +L+ G + +G++ + ++ KE
Sbjct: 573 GLCRAGEVDKARSLFEKML-----RDGHAPSNISCNILINGLCR---SGMVEEAVEFQKE 624
Query: 623 ----GQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVT 673
G D + +N++I+ C+ ++D +++++ G P+ TF+++++
Sbjct: 625 MVLRGSTPD--IVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMS 677
Score = 44.7 bits (104), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 42/191 (21%), Positives = 78/191 (40%), Gaps = 6/191 (3%)
Query: 504 LDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEA 563
+++A LL+EM L G + + ++ + +R E ++ G D Y
Sbjct: 268 VNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGY 327
Query: 564 LLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEG 623
L+ A LF +IP+ F L+ G + +L ++
Sbjct: 328 LMNGLCKIGRVDAAKDLFY-----RIPKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTS 382
Query: 624 QRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYT 683
I V +N++I+ + K+ L+ A + L MR+ G PN ++ +V G+ + GK
Sbjct: 383 YGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKL-GKID 441
Query: 684 EVTELWGEMKS 694
E + EM +
Sbjct: 442 EAYNVLNEMSA 452
>gi|414586846|tpg|DAA37417.1| TPA: hypothetical protein ZEAMMB73_755201 [Zea mays]
Length = 612
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 68/309 (22%), Positives = 120/309 (38%), Gaps = 30/309 (9%)
Query: 499 ISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDA 558
I G L A ++ DEM GV+ + + +L+ +A+ AL AGI D
Sbjct: 253 IRSGKLASARNVFDEMLRRGVQPTVVTFNTLMSGMCKASDLNNANALRGLMAKAGIAPDV 312
Query: 559 SCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQ 618
Y A +Q A+ +F+EM E + + ++ C + + +
Sbjct: 313 YTYGAFIQGLCKTGRIQDAMEMFEEMCERGLNPNTVVLTTLIDAHCKEGDVTAGLELRWE 372
Query: 619 EVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAI 678
G + D + +N +++ FC+ R M+ A ++ MR G P+ T+ +++ G
Sbjct: 373 MATRGVKAD--LVAYNALVNGFCRVRDMKAANDIVEEMRKDGLKPDKVTYTTLIDGCCKE 430
Query: 679 GGKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVA-MMEEG--- 734
G T + EMK S + D+ +++ + G A ++ MME G
Sbjct: 431 GELDTAM-----EMKQEMSDEGVALDDVTYTALISGLSKAGRSVDAERILCEMMEAGLQP 485
Query: 735 -----KMFIDKY----KYRTLFLKYHKTLYKGKTP----------KFQTEAQLKKREAAL 775
M ID + +T F + KGK P F + Q+K + L
Sbjct: 486 DNTTYTMVIDAFCKNGDVKTGFKHLKEMQNKGKNPGIVTYNVVMNGFCSLGQMKNADMLL 545
Query: 776 GFKKWLGLC 784
+G+C
Sbjct: 546 NAMLNIGVC 554
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 83/386 (21%), Positives = 163/386 (42%), Gaps = 43/386 (11%)
Query: 326 RQFYNCLLSCHLKFGDLNSASKMVLEMLQRAKEAR----NSLAAAMLPFNAVGVNNRTPS 381
RQF N L+ ++ G L SA + EML+R + N+L + M +
Sbjct: 243 RQF-NMLMRDMIRSGKLASARNVFDEMLRRGVQPTVVTFNTLMSGMC---------KASD 292
Query: 382 EQNVNCTNSVDLENSGIIENHILSYEDFTKDRKFVALEAEVKRVLQTLLGMLQKQVELI- 440
N N + + +GI + + +Y F ++ + +T G +Q +E+
Sbjct: 293 LNNANALRGL-MAKAGIAPD-VYTYGAF------------IQGLCKT--GRIQDAMEMFE 336
Query: 441 -TTEHGILQPTEKIYIKLVKAFLEAGKTKELTHFL-IKAEKENLQVSHDDAALGHVITLC 498
E G L P + L+ A + G ++T L ++ E V D A ++
Sbjct: 337 EMCERG-LNPNTVVLTTLIDAHCKEG---DVTAGLELRWEMATRGVKADLVAYNALVNGF 392
Query: 499 ISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDA 558
+ + A+D+++EM G++ Y +L+ + + ++ G+ LD
Sbjct: 393 CRVRDMKAANDIVEEMRKDGLKPDKVTYTTLIDGCCKEGELDTAMEMKQEMSDEGVALDD 452
Query: 559 SCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQ 618
Y AL+ + A + EM E+ + + + + M++ +N + K L+
Sbjct: 453 VTYTALISGLSKAGRSVDAERILCEMMEAGL-QPDNTTYTMVIDAFCKNGDVKTGFKHLK 511
Query: 619 EVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAI 678
E++ + + G+ +N V++ FC M++A+ L M ++G PN T++ ++ G+
Sbjct: 512 EMQNKGK-NPGIVTYNVVMNGFCSLGQMKNADMLLNAMLNIGVCPNDITYNILLDGHCK- 569
Query: 679 GGKYTEVTEL---WGEMKSFASSTSM 701
GK + EL G + F TS+
Sbjct: 570 HGKVRDTEELKSAKGMVSDFGVYTSL 595
>gi|225445998|ref|XP_002267263.1| PREDICTED: pentatricopeptide repeat-containing protein At2g18940
[Vitis vinifera]
gi|297735424|emb|CBI17864.3| unnamed protein product [Vitis vinifera]
Length = 821
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/239 (20%), Positives = 94/239 (39%), Gaps = 40/239 (16%)
Query: 454 YIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQAHDLLDE 513
Y L++ F +AG E L + EK N D ++ + G+ ++ D +D
Sbjct: 318 YNSLLQVFGKAGIYSEALSILKEMEKNN--CPPDLVTYNELVAAYVRAGFHEEGADFIDT 375
Query: 514 MHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQKD 573
M G+ ++ Y +++ AY +A + + + R + +G + Y A+L
Sbjct: 376 MIRKGIMPNAITYTTVINAYGKAGKEDKALSFFRQMKESGCVPNVCTYNAIL-------- 427
Query: 574 TPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRIDCGVHDW 633
G L K+S++ +M GCA N W
Sbjct: 428 --GMLG-----KKSRLEEMIDMLCDMRSNGCAPNSVT----------------------W 458
Query: 634 NNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEM 692
N ++ K + + + + M+S G PN TF++++ Y G + +V +++ EM
Sbjct: 459 NTMLAMCGNKGMHKYVNRVFREMKSCGFEPNRDTFNALIGAYGRCGSQ-IDVVKMYEEM 516
Score = 45.8 bits (107), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 35/160 (21%), Positives = 69/160 (43%), Gaps = 7/160 (4%)
Query: 594 HQEFEMLVKGCAQNHEAGLMAKLLQEVK-EGQRIDCGVHDWNNVIHFFCKKRLMQDAEKA 652
+Q E++V+ + + + +LL E+ E +D V W ++H + + + A
Sbjct: 174 NQLVELMVRILGRESQHSVALRLLDEISVEEYSLD--VRAWTTILHAYSRIGKYERAITM 231
Query: 653 LKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEMKSFASSTSMNFDEELLDSVL 712
++MR G P T++ M+ Y +G + ++ L EM+ S + FDE +V+
Sbjct: 232 FEKMRKTGLSPTLVTYNVMLDVYGKMGRSWNKILGLLDEMR----SNGLEFDEFTCSTVI 287
Query: 713 YTFVRGGFFARANEVVAMMEEGKMFIDKYKYRTLFLKYHK 752
R G A + A ++ + Y +L + K
Sbjct: 288 SACGREGLLDEARKFFARLKSEGYVAGTFTYNSLLQVFGK 327
Score = 44.7 bits (104), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 48/253 (18%), Positives = 104/253 (41%), Gaps = 7/253 (2%)
Query: 494 VITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAG 553
++ +C + G + + EM G + + +L+ AY +V + + AG
Sbjct: 461 MLAMCGNKGMHKYVNRVFREMKSCGFEPNRDTFNALIGAYGRCGSQIDVVKMYEEMIKAG 520
Query: 554 IQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLM 613
+ Y ALL + + D A + +MK SK + + +++ A+ +
Sbjct: 521 FTPCVTTYNALLNALARRGDWEAAESVILDMK-SKGFKPNETSYSLMLNCYAKGGNGRGI 579
Query: 614 AKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVT 673
K+ +E+ G + V+ F K+R + E+A + G+ P+ F+SM++
Sbjct: 580 EKIEEEIYNGHIFPSWILLRTLVLANF-KRRALMGMERAFQEFCKHGYKPDLVLFNSMLS 638
Query: 674 GYAAIGGKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEE 733
+A ++ + EM + + D +S++ + RGG + E++ +++
Sbjct: 639 IFAK-----NKMYDRAHEMLRLIRESGLQPDLVTYNSLMDMYARGGECWKGEEILKGIQK 693
Query: 734 GKMFIDKYKYRTL 746
D Y T+
Sbjct: 694 SGGKPDLVSYNTV 706
Score = 41.6 bits (96), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 42/78 (53%), Gaps = 4/78 (5%)
Query: 618 QEVKEGQRIDCGVHD---WNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTG 674
+E+ +G + G D +N VI FC++ LMQ+A + L M G P T+++ V G
Sbjct: 685 EEILKGIQKSGGKPDLVSYNTVIKGFCRQGLMQEAIRTLSEMTISGIRPCIVTYNTFVAG 744
Query: 675 YAAIGGKYTEVTELWGEM 692
Y+ G ++EV E+ M
Sbjct: 745 YSG-KGMFSEVEEVISYM 761
>gi|147825385|emb|CAN75494.1| hypothetical protein VITISV_030525 [Vitis vinifera]
Length = 821
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/239 (20%), Positives = 94/239 (39%), Gaps = 40/239 (16%)
Query: 454 YIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQAHDLLDE 513
Y L++ F +AG E L + EK N D ++ + G+ ++ D +D
Sbjct: 318 YNSLLQVFGKAGIYSEALSILKEMEKNN--CPPDLVTYNELVAAYVRAGFHEEGADFIDT 375
Query: 514 MHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQKD 573
M G+ ++ Y +++ AY +A + + + R + +G + Y A+L
Sbjct: 376 MIRKGIMPNAITYTTVINAYGKAGKEDKALSFFRQMKESGCVPNVCTYNAIL-------- 427
Query: 574 TPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRIDCGVHDW 633
G L K+S++ +M GCA N W
Sbjct: 428 --GMLG-----KKSRLEEMIDMLCDMRSNGCAPNSVT----------------------W 458
Query: 634 NNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEM 692
N ++ K + + + + M+S G PN TF++++ Y G + +V +++ EM
Sbjct: 459 NTMLAMCGNKGMHKYVNRVFREMKSCGFEPNRDTFNALIGAYGRCGSQ-IDVVKMYEEM 516
Score = 45.8 bits (107), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 35/160 (21%), Positives = 69/160 (43%), Gaps = 7/160 (4%)
Query: 594 HQEFEMLVKGCAQNHEAGLMAKLLQEVK-EGQRIDCGVHDWNNVIHFFCKKRLMQDAEKA 652
+Q E++V+ + + + +LL E+ E +D V W ++H + + + A
Sbjct: 174 NQLVELMVRILGRESQHSVALRLLDEISVEEYSLD--VRAWTTILHAYSRIGKYERAITM 231
Query: 653 LKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEMKSFASSTSMNFDEELLDSVL 712
++MR G P T++ M+ Y +G + ++ L EM+ S + FDE +V+
Sbjct: 232 FEKMRKTGLSPTLVTYNVMLDVYGKMGRSWNKILGLLDEMR----SNGLEFDEFTCSTVI 287
Query: 713 YTFVRGGFFARANEVVAMMEEGKMFIDKYKYRTLFLKYHK 752
R G A + A ++ + Y +L + K
Sbjct: 288 SACGREGLLDEARKFFARLKSEGYVAGTFTYNSLLQVFGK 327
Score = 44.7 bits (104), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 48/253 (18%), Positives = 104/253 (41%), Gaps = 7/253 (2%)
Query: 494 VITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAG 553
++ +C + G + + EM G + + +L+ AY +V + + AG
Sbjct: 461 MLAMCGNKGMHKYVNRVFREMKSCGFEPNRDTFNALIGAYGRCGSQIDVVKMYEEMIKAG 520
Query: 554 IQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLM 613
+ Y ALL + + D A + +MK SK + + +++ A+ +
Sbjct: 521 FTPCVTTYNALLNALARRGDWEAAESVILDMK-SKGFKPNETSYSLMLNCYAKGGNGRGI 579
Query: 614 AKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVT 673
K+ +E+ G + V+ F K+R + E+A + G+ P+ F+SM++
Sbjct: 580 EKIEEEIYNGHIFPSWILLRTLVLANF-KRRALMGMERAFQEFCKHGYKPDLVLFNSMLS 638
Query: 674 GYAAIGGKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEE 733
+A ++ + EM + + D +S++ + RGG + E++ +++
Sbjct: 639 IFAK-----NKMYDRAHEMLRLIRESGLQPDLVTYNSLMDMYARGGECWKGEEILKGIQK 693
Query: 734 GKMFIDKYKYRTL 746
D Y T+
Sbjct: 694 SGGKPDLVSYNTV 706
Score = 41.6 bits (96), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 42/78 (53%), Gaps = 4/78 (5%)
Query: 618 QEVKEGQRIDCGVHD---WNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTG 674
+E+ +G + G D +N VI FC++ LMQ+A + L M G P T+++ V G
Sbjct: 685 EEILKGIQKSGGKPDLVSYNTVIKGFCRQGLMQEAIRTLSEMTISGIRPCIVTYNTFVAG 744
Query: 675 YAAIGGKYTEVTELWGEM 692
Y+ G ++EV E+ M
Sbjct: 745 YSG-KGMFSEVEEVISYM 761
>gi|356554513|ref|XP_003545590.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g25630-like [Glycine max]
Length = 632
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 67/309 (21%), Positives = 134/309 (43%), Gaps = 20/309 (6%)
Query: 448 QPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQA 507
QP+ Y L+ A L K + H ++ +E Q+ D +I G ++ A
Sbjct: 104 QPSLATYTTLLNA-LTTQKYFKPIHSIVSLVEEK-QMKPDSIFFNALINAFAESGNMEDA 161
Query: 508 HDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAG-IQLDASCYEALLQ 566
++ +M +G++ S+ Y +L+K Y A +P E LL + G ++ + Y L++
Sbjct: 162 KKVVQKMKESGLKPSACTYNTLIKGYGIAGKPDESMKLLDLMSTEGNVKPNLKTYNMLIR 221
Query: 567 SKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNH-----EAGLMAKLLQEVK 621
+ ++ A ++ +M S + + F + AQN EA ++ +K
Sbjct: 222 ALCKMENISEAWNVVYKMTASGM-QPDVVTFNTIATAYAQNGKTAQAEAMILEMQRNSLK 280
Query: 622 EGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGK 681
+R C + +I +C++ +Q+A + + RM+ LG PN +S+V G+ + +
Sbjct: 281 PNERT-CTI-----IISGYCREGKVQEALRFVYRMKDLGMQPNLIVLNSLVNGFVDMMDR 334
Query: 682 YTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFIDKY 741
V E+ M+ F + D +++ + + GF + E+ M + + D +
Sbjct: 335 -DGVDEVLKLMEEF----QIRPDVITYSTIMNAWSQAGFLEKCKEIYNNMLKSGVKPDAH 389
Query: 742 KYRTLFLKY 750
Y L Y
Sbjct: 390 AYSILAKGY 398
Score = 46.6 bits (109), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 47/238 (19%), Positives = 102/238 (42%), Gaps = 20/238 (8%)
Query: 447 LQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQ 506
+QP + + A+ + GKT + +++ ++ +L+ + + +I+ G + +
Sbjct: 244 MQPDVVTFNTIATAYAQNGKTAQAEAMILEMQRNSLKPNERTCTI--IISGYCREGKVQE 301
Query: 507 AHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALL- 565
A + M G++ + V SL+ +++ V +L+ I+ D Y ++
Sbjct: 302 ALRFVYRMKDLGMQPNLIVLNSLVNGFVDMMDRDGVDEVLKLMEEFQIRPDVITYSTIMN 361
Query: 566 ---QSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKE 622
Q+ ++K ++ M +S + H + +L KG + E ++L + +
Sbjct: 362 AWSQAGFLEK----CKEIYNNMLKSGVKPDAH-AYSILAKGYVRAQEMEKAEEMLTVMTK 416
Query: 623 GQRIDCGVHD----WNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYA 676
GVH + VI +C M +A + +M G PN +TF +++ GYA
Sbjct: 417 S-----GVHPNVVIFTTVISGWCSVGRMDNAMRVFDKMGEFGVSPNLKTFETLIWGYA 469
Score = 45.8 bits (107), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 49/240 (20%), Positives = 100/240 (41%), Gaps = 6/240 (2%)
Query: 494 VITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAG 553
V+ + I G +A + + G + S + Y +LL A + + +++
Sbjct: 78 VMNILIKSGKPQEAIVIFQNLIEGGHQPSLATYTTLLNALTTQKYFKPIHSIVSLVEEKQ 137
Query: 554 IQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLM 613
++ D+ + AL+ + + A + ++MKES + S + L+KG +
Sbjct: 138 MKPDSIFFNALINAFAESGNMEDAKKVVQKMKESGLKPSACT-YNTLIKGYGIAGKPDES 196
Query: 614 AKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVT 673
KLL + + + +N +I CK + +A + +M + G P+ TF+++ T
Sbjct: 197 MKLLDLMSTEGNVKPNLKTYNMLIRALCKMENISEAWNVVYKMTASGMQPDVVTFNTIAT 256
Query: 674 GYAAIGGKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEE 733
YA GK + + EM+ S+ +E ++ + R G A V M++
Sbjct: 257 AYAQ-NGKTAQAEAMILEMQ----RNSLKPNERTCTIIISGYCREGKVQEALRFVYRMKD 311
>gi|356552005|ref|XP_003544362.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At1g09680-like [Glycine max]
Length = 509
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 65/268 (24%), Positives = 104/268 (38%), Gaps = 39/268 (14%)
Query: 447 LQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQ 506
L+PT + L+ +AG +E F +K E+ +V D +I G LD+
Sbjct: 173 LRPTVVSFNTLISGCCKAGAVEE--GFRLKGVMESERVCPDVFTFSALINGLCKEGRLDE 230
Query: 507 AHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQ 566
L DEM G+ + + L+ + + + + G++ D Y AL+
Sbjct: 231 GSLLFDEMCGKGLVPNGVTFTVLIDGQCKGGKVDLALKNFQMMLAQGVRPDLVTYNALIN 290
Query: 567 SKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQ--NHEAGLMAKLLQEVKEGQ 624
D A L EM S + R F L+ GC + + E+ L K + V+EG
Sbjct: 291 GLCKVGDLKEARRLVNEMSASGL-RPDRITFTTLIDGCCKYGDMESALEIKR-RMVEEGI 348
Query: 625 RID-----------CG---VHD-------------------WNNVIHFFCKKRLMQDAEK 651
+D C VHD + V+ FCKK + K
Sbjct: 349 ELDDVAFTVLISGLCRDGRVHDAERMLRDMLSAGFKPDDPTYTMVVDCFCKKGNVXMGFK 408
Query: 652 ALKRMRSLGHLPNAQTFHSMVTGYAAIG 679
LK M+S GH+P T+++++ G G
Sbjct: 409 LLKEMQSDGHVPGVVTYNALMNGLCKQG 436
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/209 (21%), Positives = 95/209 (45%), Gaps = 9/209 (4%)
Query: 497 LCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQL 556
LC +G L +A L++EM +G+R + +L+ + + R GI+L
Sbjct: 292 LC-KVGDLKEARRLVNEMSASGLRPDRITFTTLIDGCCKYGDMESALEIKRRMVEEGIEL 350
Query: 557 DASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKL 616
D + L+ A + ++M + + + M+V + + KL
Sbjct: 351 DDVAFTVLISGLCRDGRVHDAERMLRDMLSAGF-KPDDPTYTMVVDCFCKKGNVXMGFKL 409
Query: 617 LQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYA 676
L+E++ + GV +N +++ CK+ +++A+ L M ++G PN T++ ++ G++
Sbjct: 410 LKEMQSDGHVP-GVVTYNALMNGLCKQGQVKNAKMLLDAMLNVGVAPNDITYNILLEGHS 468
Query: 677 AIGGKYTEVTELW----GEMKSFASSTSM 701
G +++ G +K +AS T++
Sbjct: 469 KHGSSVD--VDIFNSEKGLVKDYASYTAL 495
>gi|356540087|ref|XP_003538522.1| PREDICTED: pentatricopeptide repeat-containing protein At5g39980,
chloroplastic-like [Glycine max]
Length = 667
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 66/308 (21%), Positives = 127/308 (41%), Gaps = 11/308 (3%)
Query: 447 LQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQ 506
L P Y L+ F + G +L + E++N VS D ++I L L +
Sbjct: 175 LSPDRYTYSTLITCFGKHGLFDSSLFWLQQMEQDN--VSGDLVLYSNLIDLARKLSDYSK 232
Query: 507 AHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQ 566
A + + + + Y S++ + +A RE LL++ R +Q D Y LL
Sbjct: 233 AISIFSRLKASTITPDLIAYNSMINVFGKAKLFREARLLLQEMRDNAVQPDTVSYSTLLA 292
Query: 567 SKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRI 626
+ + AL LF EM E+K P +++ Q H +L +++ I
Sbjct: 293 IYVDNQKFVEALSLFSEMNEAKCPLD-LTTCNIMIDVYGQLHMPKEADRLFWSMRK-MGI 350
Query: 627 DCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVT 686
V +N ++ + + L +A + M+S N T+++M+ Y ++ + T
Sbjct: 351 QPNVISYNTLLRVYGEADLFGEAIHLFRLMQSKDVQQNVVTYNTMINIYGKT-LEHEKAT 409
Query: 687 ELWGEM-KSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFIDKYKYRT 745
L EM K ++ + +++ + + G RA + + + ID+ Y+T
Sbjct: 410 NLIQEMNKRGIEPNAITY-----STIISIWEKAGKLDRAAILFQKLRSSGVRIDEVLYQT 464
Query: 746 LFLKYHKT 753
+ + Y +T
Sbjct: 465 MIVAYERT 472
>gi|363543233|ref|NP_001241831.1| uncharacterized protein LOC100857030 [Zea mays]
gi|224033903|gb|ACN36027.1| unknown [Zea mays]
Length = 655
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 65/261 (24%), Positives = 104/261 (39%), Gaps = 27/261 (10%)
Query: 502 GWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCY 561
G A +L+++H G +L A + E LLRD S G + D Y
Sbjct: 171 GGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVDEALHLLRDLPSFGCEPDVVSY 230
Query: 562 EALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAK----LL 617
A+L+ + K L +EM P + F L+ +N GL + L
Sbjct: 231 NAVLKGLCMAKRWGCVQELMEEMVRMACPPN-IVTFNTLISYLCRN---GLFERVHEVLA 286
Query: 618 QEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAA 677
Q V+ G D + + +I CK+ ++ A + L RM S G PN +++++ G +
Sbjct: 287 QMVEHGCTPD--IRMYATIIDGICKEGHLEVAHEILNRMPSYGLKPNVVCYNTLLKGLCS 344
Query: 678 IGGKYTEVTELWGEMKSFASSTSMNFDEEL-LDSVLYT-----FVRGGFFARANEVVAMM 731
++ E EL EM FD++ LD V + F + G R E++ M
Sbjct: 345 -AERWEETEELLAEM----------FDKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQM 393
Query: 732 EEGKMFIDKYKYRTLFLKYHK 752
E D Y T+ + K
Sbjct: 394 LERGCMPDVITYTTVINGFCK 414
Score = 47.8 bits (112), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 59/286 (20%), Positives = 107/286 (37%), Gaps = 47/286 (16%)
Query: 447 LQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQ 506
L+P Y L+K A + +E L AE + DD ++ G +D+
Sbjct: 328 LKPNVVCYNTLLKGLCSAERWEETEELL--AEMFDKDCPLDDVTFNILVDFFCQNGLVDR 385
Query: 507 AHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQ 566
+LL++M G Y +++ + + E LL+ + G + + Y +L+
Sbjct: 386 VIELLEQMLERGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLK 445
Query: 567 SKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRI 626
+ A L +M + +GC N
Sbjct: 446 GLCSAERWVDAEDLMSQMIQ---------------QGCPLNPIT---------------- 474
Query: 627 DCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVT 686
+N +I+F CKK L++ A + LK+M G P+ ++ +++ G GK E
Sbjct: 475 ------FNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGK-AGKTDEAL 527
Query: 687 ELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMME 732
EL M + M+ + + S+ R G R N+V+ M +
Sbjct: 528 ELLNVM----VNKGMSPNTIIYSSIASALSREG---RINKVIQMFD 566
>gi|414869870|tpg|DAA48427.1| TPA: hypothetical protein ZEAMMB73_860756 [Zea mays]
gi|414869871|tpg|DAA48428.1| TPA: hypothetical protein ZEAMMB73_860756 [Zea mays]
Length = 741
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 85/409 (20%), Positives = 150/409 (36%), Gaps = 86/409 (21%)
Query: 283 GVKADSNLLIIMAHIYERNGRREELRKLQRHIDEAVNLSDIQFRQFYNCLLSCHLKFGDL 342
G DS++ IM H GR E L + +A+ + YN L+ + GDL
Sbjct: 174 GCAPDSHVYSIMVHGLCGAGRAGEAVAL---LTDAMGKGFVPNVAVYNALIDGYCSTGDL 230
Query: 343 NSASKMVLEMLQRAKEARNSLAAAMLPFNAVGVNNRTPSEQNVNCTNSVDLENSGIIENH 402
A + M + LP N RT ++ SG +E
Sbjct: 231 ELAIDIFKGMQSKG----------CLP------NVRTYTQLICG------FCKSGKVERA 268
Query: 403 ILSYEDFTKDRKFVALEAEVKRVLQTLLGMLQKQVELITTEHGI----------LQPTEK 452
++ Y +EA + + T ++Q Q EH L P E
Sbjct: 269 MVLYSRM--------IEAGLAPNVVTYTTLIQGQCSEGHLEHAFRLLHSMEACGLAPNEW 320
Query: 453 IYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQAHDLLD 512
+ L+ A + G+ +E FL ++ ++V+ + LC S G D AH+L+
Sbjct: 321 TCLVLIDALCKHGRIEEAQQFLGSLVQKGIKVNQV-IYTSMIDALCKS-GKFDGAHNLMQ 378
Query: 513 EMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKI--V 570
++ G + +Y+SL+ N+ E +LL D +G+Q +A + L+ +
Sbjct: 379 KIITEGFVPDAHMYSSLIDGLCRENKLLEAISLLNDMIESGVQANAVPFTILIDKHLREF 438
Query: 571 QKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRIDCGV 630
+ D+P K++ + + V
Sbjct: 439 RSDSP---------------------------------------KMISDRMAAAGVKPDV 459
Query: 631 HDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIG 679
+ I +C+ M+DAE + +M G PN T+++++ GYA +G
Sbjct: 460 VTYTVFIRSYCQDGRMEDAESMMIQMIDHGVRPNLTTYNTLIKGYANLG 508
Score = 47.8 bits (112), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 54/234 (23%), Positives = 81/234 (34%), Gaps = 41/234 (17%)
Query: 447 LQPTEKIYIKLVKAFLEAGKTKELTH-FLIKAEKENLQVSHDDAALGHVITLCISLGWLD 505
L P Y V + G FL+ ++ + AAL + LC G +
Sbjct: 105 LAPDSHAYTSFVLGYCRTGLFAHACRLFLLMPQRGCARTPFTYAAL--LQGLC-GAGMVR 161
Query: 506 QAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALL 565
+A + M G S VY+ ++ A R E ALL DA G + + Y AL+
Sbjct: 162 EAMAVFAGMWPDGCAPDSHVYSIMVHGLCGAGRAGEAVALLTDAMGKGFVPNVAVYNALI 221
Query: 566 QSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQR 625
D A+ +FK M+ KGC N
Sbjct: 222 DGYCSTGDLELAIDIFKGMQS---------------KGCLPN------------------ 248
Query: 626 IDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIG 679
V + +I FCK ++ A RM G PN T+ +++ G + G
Sbjct: 249 ----VRTYTQLICGFCKSGKVERAMVLYSRMIEAGLAPNVVTYTTLIQGQCSEG 298
>gi|296083087|emb|CBI22491.3| unnamed protein product [Vitis vinifera]
Length = 548
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/198 (21%), Positives = 87/198 (43%), Gaps = 7/198 (3%)
Query: 553 GIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGL 612
GI+ D Y LL A+ +F+EM+ + F L+K +
Sbjct: 99 GIKPDVFTYTTLLSGFEKAGKDKAAVQIFEEMRNEGC-KPNICTFNALIKMHGNRGKFTE 157
Query: 613 MAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMV 672
M K+ +++K Q + WN ++ F + + + K M+ G +P TF++++
Sbjct: 158 MMKVFEDIKTFQ-CSPDIVTWNTLLSVFGQNGMDSEVSGVFKEMKRAGFVPERDTFNTLI 216
Query: 673 TGYAAIGGKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMME 732
+ Y+ G + + ++ M +N D ++VL RGG + ++ +V+A M+
Sbjct: 217 SSYSRCGS-FDQAMAVYKRML----EAGVNPDLSSYNAVLAALARGGLWKQSEKVLAEMK 271
Query: 733 EGKMFIDKYKYRTLFLKY 750
+G+ ++ Y +L Y
Sbjct: 272 DGRCKPNELTYCSLLHAY 289
Score = 48.9 bits (115), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 66/333 (19%), Positives = 120/333 (36%), Gaps = 34/333 (10%)
Query: 448 QPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQA 507
+P + L+K GK E+ + + Q S D ++++ G +
Sbjct: 136 KPNICTFNALIKMHGNRGKFTEMMKVF--EDIKTFQCSPDIVTWNTLLSVFGQNGMDSEV 193
Query: 508 HDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQS 567
+ EM AG + +L+ +Y + A+ + AG+ D S Y A+L +
Sbjct: 194 SGVFKEMKRAGFVPERDTFNTLISSYSRCGSFDQAMAVYKRMLEAGVNPDLSSYNAVLAA 253
Query: 568 KIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRID 627
+ + EMK+ + + + L+ A E M L +E+ G I+
Sbjct: 254 LARGGLWKQSEKVLAEMKDGRC-KPNELTYCSLLHAYANGKEIERMCALAEEIYSGI-IE 311
Query: 628 CGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYA----------- 676
++ K L+ + E+A +R G P+ T ++MV+ Y
Sbjct: 312 PRAVLLKTLVLVNSKCDLLMETERAFLELRQRGFSPDITTLNAMVSIYGRRQMVAKANEI 371
Query: 677 ----AIGGKYTEVTELWGEMKSFASSTSMNFDEELL---------------DSVLYTFVR 717
GG +T M ++ S + EE+L ++V+Y + R
Sbjct: 372 LDCMKRGGFTPSLTTYNSLMYMYSRSANFERSEEILREILAKGIRPDIISYNTVIYAYCR 431
Query: 718 GGFFARANEVVAMMEEGKMFIDKYKYRTLFLKY 750
G A+ V++ M E D Y T Y
Sbjct: 432 NGRMRDASRVLSEMRESGPAPDIITYNTFIASY 464
Score = 42.7 bits (99), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 38/64 (59%), Gaps = 3/64 (4%)
Query: 615 KLLQEV-KEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVT 673
++L+E+ +G R D + +N VI+ +C+ M+DA + L MR G P+ T+++ +
Sbjct: 405 EILREILAKGIRPD--IISYNTVIYAYCRNGRMRDASRVLSEMRESGPAPDIITYNTFIA 462
Query: 674 GYAA 677
YAA
Sbjct: 463 SYAA 466
>gi|449442128|ref|XP_004138834.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22670,
mitochondrial-like [Cucumis sativus]
Length = 591
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/240 (23%), Positives = 105/240 (43%), Gaps = 10/240 (4%)
Query: 509 DLLDEM-HLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQS 567
+L+DEM HLAG S + +++ A R +E R+ GI D + L+ +
Sbjct: 228 ELVDEMNHLAG-SVSLETMSKVIRRLARAGRHQEAIHAFRNIEKYGISTDTTAMNVLMDA 286
Query: 568 KIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRID 627
+ + A ++F+E+K S IP + F +L+ G + + K++ EV E ++
Sbjct: 287 LVKEASVEDAHNVFRELKCS-IPFN-LASFNVLIHGYCKAKKLDEAWKIMGEV-EKSGLE 343
Query: 628 CGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTE 687
V + I C+++ ++ +K L +M G PN TF +++ + E +
Sbjct: 344 PDVISYTAFIEAHCREKDFRNVDKVLVQMEHKGCKPNVITF-TIIMHALGKAKQINEALK 402
Query: 688 LWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFIDKYKYRTLF 747
++ +MK D S+++ + G E+V ME+ + D Y TL
Sbjct: 403 VYEKMKKEGCVP----DSSFYSSLIFILGKAGRLTDVKEIVEDMEKQGVTPDVLTYNTLI 458
>gi|115473887|ref|NP_001060542.1| Os07g0661900 [Oryza sativa Japonica Group]
gi|24414184|dbj|BAC22426.1| pentatricopeptide (PPR)repeat-containing protein-like [Oryza sativa
Japonica Group]
gi|113612078|dbj|BAF22456.1| Os07g0661900 [Oryza sativa Japonica Group]
gi|215697327|dbj|BAG91321.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 440
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/151 (23%), Positives = 72/151 (47%), Gaps = 8/151 (5%)
Query: 609 EAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTF 668
E+ L+A++L+ + V D+ +IH + K++L+Q AE A M+S G LP Q
Sbjct: 143 ESPLLAEVLEHALLEDSFEANVRDYTKLIHIYGKQKLLQKAEDAFHAMKSRG-LPCDQVM 201
Query: 669 HSMVTGYAAIGGKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVV 728
+ + + G T E++ E+ + D+ + S++ ++R +A +++
Sbjct: 202 LTALMDMYSKAGDLTRAKEIFNEIGLLG----LPMDKRVYGSMIMAYIRADMLDKAEDMI 257
Query: 729 AMMEEGKMFIDKYKYRTLFLKYHKTLYKGKT 759
+ M + ++ K Y+ L Y YKG +
Sbjct: 258 SEMGDQQIVAGKEVYKALLRAYS---YKGDS 285
>gi|147857775|emb|CAN80799.1| hypothetical protein VITISV_019809 [Vitis vinifera]
Length = 1099
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 97/231 (41%), Gaps = 10/231 (4%)
Query: 447 LQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQ---VSHDDAALGHVITLCISLGW 503
+ P + +V + + G E + K + L ++ LGH C + G
Sbjct: 190 ISPNIYTFNAMVNGYCKIGNVVEAELYASKIVQAGLHPDTFTYTSLILGH----CRNKG- 244
Query: 504 LDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEA 563
+D A+++ M G + + Y +L+ EA R E L D Y
Sbjct: 245 VDNAYEVFLIMPQKGCQRNEVSYTNLIHGLCEAGRINEALKLFADMTEDNCCPTVRTYTV 304
Query: 564 LLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEG 623
L+ + AL+LF EMKE + H + +L+ G + ++ K+L E+ E
Sbjct: 305 LIYALSGSGRKVEALNLFNEMKEKGCEPNVHT-YTVLIDGLCKENKMDEARKMLSEMSEK 363
Query: 624 QRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTG 674
I V +N +I +CK+ ++ DA + L M S PN +T++ ++ G
Sbjct: 364 GLIP-SVVTYNALIDGYCKEGMIDDAFEILDLMESNSCGPNTRTYNELICG 413
Score = 42.4 bits (98), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 42/188 (22%), Positives = 82/188 (43%), Gaps = 11/188 (5%)
Query: 496 TLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQ 555
TLC G +++A L D + GV+A+ +Y +L+ Y + + +LL +
Sbjct: 483 TLCKE-GRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACL 541
Query: 556 LDASCYEALLQSKIVQKDTPGALHLFKEMKESKI-PRSGHQEF---EMLVKGCAQNHEAG 611
++ Y L++ +K A L +M + P EML G A +H
Sbjct: 542 PNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDG-AFDHALK 600
Query: 612 LMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSM 671
+ + V G + D V + +H + + ++++ + + +M G LP+ T+ +
Sbjct: 601 VFNHM---VSLGYQPD--VCTYTAFLHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYTVL 655
Query: 672 VTGYAAIG 679
+ GYA +G
Sbjct: 656 IDGYARLG 663
Score = 41.6 bits (96), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 55/281 (19%), Positives = 100/281 (35%), Gaps = 32/281 (11%)
Query: 502 GWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCY 561
G +D A ++LD M ++ Y L+ + + + ALL + Y
Sbjct: 383 GMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLERKLSPSLITY 442
Query: 562 EALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVK 621
+L+ + D A L M E+ + + + + + L VK
Sbjct: 443 NSLIHGQCKVNDLESAYRLLSLMNENGL-VPDQWTYSVFIDTLCKEGRVEEAGTLFDSVK 501
Query: 622 EGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYA----- 676
+ + + +I +CK + A L+RM + LPN+ T++ ++ G
Sbjct: 502 -AKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEKKM 560
Query: 677 -----------AIGGKYTEVTE--LWGEM----------KSFASSTSMNFDEELL--DSV 711
+G K T VT L GEM K F S+ + ++ +
Sbjct: 561 KEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQPDVCTYTAF 620
Query: 712 LYTFVRGGFFARANEVVAMMEEGKMFIDKYKYRTLFLKYHK 752
L+ + G ++V+A M E + D Y L Y +
Sbjct: 621 LHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYTVLIDGYAR 661
>gi|30694913|ref|NP_191463.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218525907|sp|Q9LYT2.2|PP287_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g59040
gi|332646344|gb|AEE79865.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 583
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/232 (24%), Positives = 105/232 (45%), Gaps = 10/232 (4%)
Query: 448 QPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHV-ITLCISLGWLDQ 506
+P+ Y ++K F+E K KE E D + H+ I + G ++
Sbjct: 206 EPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYEK 265
Query: 507 AHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQ 566
A + M GV S+ Y SL+ E + +EV+ + + + IQ D Y L++
Sbjct: 266 ARKVFSSMVGKGVPQSTVTYNSLMS--FETSY-KEVSKIYDQMQRSDIQPDVVSYALLIK 322
Query: 567 SKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLM--AKLLQEVKEGQ 624
+ + AL +F+EM ++ + R H+ + +L+ A +G++ AK + +
Sbjct: 323 AYGRARREEEALSVFEEMLDAGV-RPTHKAYNILLDAFAI---SGMVEQAKTVFKSMRRD 378
Query: 625 RIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYA 676
RI + + ++ + M+ AEK KR++ G PN T+ +++ GYA
Sbjct: 379 RIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYA 430
Score = 40.0 bits (92), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 58/345 (16%), Positives = 135/345 (39%), Gaps = 68/345 (19%)
Query: 250 KPNTNTFNIALAGCLLFETTRKAEQLLDIM---PRIGVKADSNLLIIMAHIYERNGRREE 306
+P+ T+ I L + + ++AE++ + + + +K D + +M ++Y++ G E+
Sbjct: 206 EPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYEK 265
Query: 307 LRKL-QRHIDEAVNLSDIQFRQFYNCLLSCHLKFGDLNSASKMVLEMLQRAKEARNSLAA 365
RK+ + + V S + YN L+S + +++ + + +QR+
Sbjct: 266 ARKVFSSMVGKGVPQSTVT----YNSLMSFETSYKEVSK----IYDQMQRSD-------- 309
Query: 366 AMLPFNAVGVNNRTPSEQNVNCTNSVDLENSGIIENHILSYEDFTKDRKFVALEAEVKRV 425
I+ ++SY K E E V
Sbjct: 310 ---------------------------------IQPDVVSYALLIKAYGRARREEEALSV 336
Query: 426 LQTLLGMLQKQVELITTEHGILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVS 485
+ +L + G+ +PT K Y L+ AF +G ++ ++ ++
Sbjct: 337 FEEML------------DAGV-RPTHKAYNILLDAFAISGMVEQAKTVFKSMRRD--RIF 381
Query: 486 HDDAALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTAL 545
D + +++ ++ ++ A + + G + Y +L+K Y +AN ++ +
Sbjct: 382 PDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKANDVEKMMEV 441
Query: 546 LRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIP 590
R +GI+ + + ++ + K+ AL +KEM+ +P
Sbjct: 442 YEKMRLSGIKANQTILTTIMDASGRCKNFGSALGWYKEMESCGVP 486
>gi|15242446|ref|NP_198787.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170916|sp|Q9FIX3.1|PP407_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g39710; AltName: Full=Protein EMBRYO DEFECTIVE 2745
gi|10177971|dbj|BAB11377.1| unnamed protein product [Arabidopsis thaliana]
gi|332007083|gb|AED94466.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 747
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 60/261 (22%), Positives = 112/261 (42%), Gaps = 20/261 (7%)
Query: 447 LQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVIT-LCISLGWLD 505
P+ Y L+ GK ++ L +++ L S D + V++ C S +D
Sbjct: 411 FSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGL--SPDVVSYSTVLSGFCRSYD-VD 467
Query: 506 QAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALL 565
+A + EM G++ + Y+SL++ + E R +E L + G+ D Y AL+
Sbjct: 468 EALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALI 527
Query: 566 QSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGC---AQNHEAG-LMAKLLQEVK 621
+ ++ D AL L EM E + + +L+ G ++ EA L+ KL E
Sbjct: 528 NAYCMEGDLEKALQLHNEMVEKGV-LPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEES 586
Query: 622 EGQRI-------DCGVHDWNNVIHF---FCKKRLMQDAEKALKRMRSLGHLPNAQTFHSM 671
+ +C ++ +V+ FC K +M +A++ + M H P+ ++ M
Sbjct: 587 VPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIM 646
Query: 672 VTGYAAIGGKYTEVTELWGEM 692
+ G+ G + L+ EM
Sbjct: 647 IHGHCR-AGDIRKAYTLYKEM 666
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/192 (20%), Positives = 90/192 (46%), Gaps = 5/192 (2%)
Query: 502 GWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCY 561
G +++A + LD+M + G+ + Y +L+ + + E +LR+ G Y
Sbjct: 359 GNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTY 418
Query: 562 EALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQE-V 620
AL+ V A+ + ++MKE + + ++ G ++++ ++ +E V
Sbjct: 419 NALINGHCVTGKMEDAIAVLEDMKEKGLS-PDVVSYSTVLSGFCRSYDVDEALRVKREMV 477
Query: 621 KEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGG 680
++G + D ++++I FC++R ++A + M +G P+ T+ +++ Y + G
Sbjct: 478 EKGIKPD--TITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAY-CMEG 534
Query: 681 KYTEVTELWGEM 692
+ +L EM
Sbjct: 535 DLEKALQLHNEM 546
Score = 48.5 bits (114), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 100/207 (48%), Gaps = 12/207 (5%)
Query: 521 ASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQK-DTPGALH 579
++SSV+ ++K+Y + + +++ A++ G Y A+L + I K + A +
Sbjct: 132 STSSVFDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAEN 191
Query: 580 LFKEMKESKIPRSGHQEFEMLVKG-C-AQNHEAGLMAKLLQEVKEGQRIDCGVHDWNNVI 637
+FKEM ES++ + + +L++G C A N + L L + E + V +N +I
Sbjct: 192 VFKEMLESQVSPNVFT-YNILIRGFCFAGNIDVALT---LFDKMETKGCLPNVVTYNTLI 247
Query: 638 HFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEMKSFAS 697
+CK R + D K L+ M G PN +++ ++ G G+ EV+ + EM
Sbjct: 248 DGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCR-EGRMKEVSFVLTEMNRRGY 306
Query: 698 STSMNFDEELLDSVLYTFVRGGFFARA 724
S DE ++++ + + G F +A
Sbjct: 307 S----LDEVTYNTLIKGYCKEGNFHQA 329
Score = 47.8 bits (112), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 45/186 (24%), Positives = 81/186 (43%), Gaps = 18/186 (9%)
Query: 502 GWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCY 561
G +D A L D+M G + Y +L+ Y + + + LLR G++ + Y
Sbjct: 219 GNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISY 278
Query: 562 EALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQ----EFEMLVKG-CAQN--HEAGLM- 613
++ + + EM R G+ + L+KG C + H+A +M
Sbjct: 279 NVVINGLCREGRMKEVSFVLTEMN-----RRGYSLDEVTYNTLIKGYCKEGNFHQALVMH 333
Query: 614 AKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVT 673
A++L+ + V + ++IH CK M A + L +MR G PN +T+ ++V
Sbjct: 334 AEMLR-----HGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVD 388
Query: 674 GYAAIG 679
G++ G
Sbjct: 389 GFSQKG 394
>gi|357480939|ref|XP_003610755.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355512090|gb|AES93713.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 596
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/220 (22%), Positives = 94/220 (42%), Gaps = 8/220 (3%)
Query: 527 ASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKE 586
+ +++ + +A R + R G++ D + LL + + + A ++ E K
Sbjct: 250 SKVMRRFAKAQRHEDAVEAFRGMGKYGVEKDTAALNKLLDALVKGQSIEIAHNVLDEFKS 309
Query: 587 SKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLM 646
S +P S F +L+ G + K+++E KE + V +NN I +C +
Sbjct: 310 S-VPLSS-PSFNILINGWCKVRNFEKARKVMEERKE-HGFEPDVFTYNNFIESYCHDKDF 366
Query: 647 QDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEMKSFASSTSMNFDEE 706
+ ++ L+ MR G PNA T+ ++ GY G+ ++ E + MK + D
Sbjct: 367 RKVDEVLEEMRGNGCPPNAVTYTILLLGYGK-AGQLSKALEEYERMK----KDGIVPDTP 421
Query: 707 LLDSVLYTFVRGGFFARANEVVAMMEEGKMFIDKYKYRTL 746
S++Y + G A EV M + + D Y T+
Sbjct: 422 FYSSLMYILGKAGRLKDACEVFDDMPKQGVVRDVVTYNTM 461
>gi|410109903|gb|AFV61031.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
montevidensis]
Length = 431
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/234 (22%), Positives = 100/234 (42%), Gaps = 6/234 (2%)
Query: 447 LQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQ 506
L+P+ Y L+ ++ G E F +K+ V D +I +D
Sbjct: 173 LRPSVVSYNTLMNGYIRLGDLDE--GFRLKSAMLASGVQPDVYTYSVLINGLCKESKIDD 230
Query: 507 AHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQ 566
A++L DEM + G+ +S + +L+ + + R + + S + D Y L+
Sbjct: 231 ANELFDEMLVKGLVPNSVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIY 290
Query: 567 SKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQE-VKEGQR 625
+ D A HL EM + + + L+ GC ++ + + + ++E R
Sbjct: 291 GLCKKGDLKQAHHLIDEMSMKGL-KPDKITYTTLIDGCCKDGDLDTAFEHRKRMIQENTR 349
Query: 626 IDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIG 679
+D V + +I C++ DAEK L+ M S+G P+A+T+ ++ + G
Sbjct: 350 LDDVV--YTALISGLCREGQSVDAEKMLREMLSVGLKPDARTYTMIINEFCKKG 401
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 52/224 (23%), Positives = 88/224 (39%), Gaps = 14/224 (6%)
Query: 507 AHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQ 566
A + D + G+R S Y +L+ YI E L ++G+Q D Y L+
Sbjct: 161 AQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLIN 220
Query: 567 SKIVQKDTPGALHLFKEM-KESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQR 625
+ A LF EM + +P S F L+ G +N L ++ +++ Q
Sbjct: 221 GLCKESKIDDANELFDEMLVKGLVPNS--VTFTTLIDGHCKNGRVDLAMEIYKQMLS-QS 277
Query: 626 IDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEV 685
+ + +N +I+ CKK ++ A + M G P+ T+ +++ G G T
Sbjct: 278 LSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSMKGLKPDKITYTTLIDGCCKDGDLDT-- 335
Query: 686 TELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVA 729
+F M + LD V+YT + G V A
Sbjct: 336 --------AFEHRKRMIQENTRLDDVVYTALISGLCREGQSVDA 371
Score = 40.8 bits (94), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 28/117 (23%), Positives = 58/117 (49%), Gaps = 5/117 (4%)
Query: 630 VHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELW 689
V+ ++ +I+ CK+ + DA + M G +PN+ TF +++ G+ G+ E++
Sbjct: 212 VYTYSVLINGLCKESKIDDANELFDEMLVKGLVPNSVTFTTLIDGHCK-NGRVDLAMEIY 270
Query: 690 GEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFIDKYKYRTL 746
+M S S++ D ++++Y + G +A+ ++ M + DK Y TL
Sbjct: 271 KQML----SQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSMKGLKPDKITYTTL 323
Score = 40.8 bits (94), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 35/148 (23%), Positives = 56/148 (37%), Gaps = 7/148 (4%)
Query: 447 LQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQ 506
L P Y L+ + G K+ H + + + L+ D +I C G LD
Sbjct: 278 LSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSMKGLK--PDKITYTTLIDGCCKDGDLDT 335
Query: 507 AHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQ 566
A + M R VY +L+ + + +LR+ S G++ DA Y ++
Sbjct: 336 AFEHRKRMIQENTRLDDVVYTALISGLCREGQSVDAEKMLREMLSVGLKPDARTYTMIIN 395
Query: 567 SKIVQKDTPGALHLFKEMKESKIPRSGH 594
+ D L KEM+ R GH
Sbjct: 396 EFCKKGDVWKGSKLLKEMQ-----RDGH 418
>gi|356556194|ref|XP_003546411.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g18940-like [Glycine max]
Length = 829
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 60/305 (19%), Positives = 114/305 (37%), Gaps = 44/305 (14%)
Query: 448 QPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQA 507
+P Y +++ F +AG E L + E N D + + G+LD+
Sbjct: 318 KPGTVTYNSMLQVFGKAGIYTEALSILKEMEDNN--CPPDSVTYNELAATYVRAGFLDEG 375
Query: 508 HDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQS 567
++D M GV ++ Y +++ AY +A R + L + G + Y ++L
Sbjct: 376 MAVIDTMTSKGVMPNAITYTTVIDAYGKAGREDDALRLFSLMKDLGCAPNVYTYNSVLAM 435
Query: 568 KIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRID 627
+ T + + EMK + GCA N
Sbjct: 436 LGKKSRTEDVIKVLCEMK---------------LNGCAPNRAT----------------- 463
Query: 628 CGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTE 687
WN ++ ++ K L+ M++ G P+ TF+++++ YA G + + +
Sbjct: 464 -----WNTMLAVCSEEGKHNYVNKVLREMKNCGFEPDKDTFNTLISAYARCGSE-VDSAK 517
Query: 688 LWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFIDKYKYRTLF 747
++GEM + + LL+++ R G + A V+ M ++ Y L
Sbjct: 518 MYGEMVKSGFTPCVTTYNALLNAL----ARRGDWKAAESVIQDMRTKGFKPNENSYSLLL 573
Query: 748 LKYHK 752
Y K
Sbjct: 574 HCYSK 578
Score = 44.3 bits (103), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 82/387 (21%), Positives = 158/387 (40%), Gaps = 86/387 (22%)
Query: 145 EKAYGLVEQAFEEGKQILLEKEPLIYLSL--GLSKCGLPVPASTILRKLVATEQYPPVTA 202
E + V + E K E + + +L ++CG V ++ + ++V + P VT
Sbjct: 474 EGKHNYVNKVLREMKNCGFEPDKDTFNTLISAYARCGSEVDSAKMYGEMVKSGFTPCVTT 533
Query: 203 WSAILAHMSLTAPGAYLAAELILEIGYLFQDGRVDPRKKCNAPLIAMKPNTNTFNIAL-- 260
++A+L +L G + AAE +++ D R K KPN N++++ L
Sbjct: 534 YNALLN--ALARRGDWKAAESVIQ----------DMRTK------GFKPNENSYSLLLHC 575
Query: 261 ---AG--------------------CLLFETT----------RKAEQLLDIMPRIGVKAD 287
AG +L T R E+ D + + G K D
Sbjct: 576 YSKAGNVKGIEKVEKEIYDGHVFPSWILLRTLVLTNHKCRHLRGMERAFDQLQKYGYKPD 635
Query: 288 SNLLIIMAHIYERNGRREELRKLQRHIDEAVNLSDIQFRQF-YNCLLSCHLKFGDLNSAS 346
++ M ++ RN + R++ I E +Q F YNCL+ +++ G+ A
Sbjct: 636 LVVINSMLSMFARNKMFSKAREMLHFIHEC----GLQPNLFTYNCLMDLYVREGECWKAE 691
Query: 347 KMVLEMLQRAKEARNSLAAAMLPFNAV--GVNNRTPSEQNVNCTNSVDLENSGIIENHIL 404
+ VL+ +Q + + ++ +N V G + ++ + + + + I+ I+
Sbjct: 692 E-VLKGIQNSGPEPD-----VVSYNTVIKGFCRKGLMQEAIGVLSEMTTKG---IQPTIV 742
Query: 405 SYEDFTKDRKFVALEAEVKRVLQTLLGMLQKQVELITTEHGILQPTEKIYIKLVKAFLEA 464
+Y F + L E V++ ++ EH +P+E Y LV + +A
Sbjct: 743 TYNTFLSGYAGMELFDEANEVIRFMI------------EHNC-RPSELTYKILVDGYCKA 789
Query: 465 GKTKELTHFLIKAEKENLQVSHDDAAL 491
GK +E F+ K ++ L +S DD ++
Sbjct: 790 GKYEEAMDFVSKIKE--LDISFDDQSV 814
Score = 41.6 bits (96), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 29/49 (59%)
Query: 630 VHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAI 678
V +N VI FC+K LMQ+A L M + G P T+++ ++GYA +
Sbjct: 706 VVSYNTVIKGFCRKGLMQEAIGVLSEMTTKGIQPTIVTYNTFLSGYAGM 754
Score = 39.7 bits (91), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 65/319 (20%), Positives = 128/319 (40%), Gaps = 22/319 (6%)
Query: 396 SGIIENHILSYEDFTKDRKFVALEAEVKRVLQTLLGMLQKQVELITTEHGILQPTEKIYI 455
S I+ + + DF KF LEA+ +L+ L + L+ E G L +
Sbjct: 117 SSIVGSPLHELNDFFNSVKFELLEADFPSLLKALDLSGNWERALLLFEWGWLHFGSDQNL 176
Query: 456 KLVKAFLE-----AGKTKELT-----HFLIKAEKENLQVSHDDAALGHVITLCISLGWLD 505
+L +E G+ + + LI EK +L V A ++ G
Sbjct: 177 RLDNQVVELMVRILGRESQHSIASKLFDLIPVEKYSLDVR----AYTTILHSYARTGKYK 232
Query: 506 QAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPRE-VTALLRDARSAGIQLDASCYEAL 564
+A DL +M G+ + Y +L Y + R + + LL + RS G++LD +
Sbjct: 233 RAIDLFGKMKEIGLDPTLVTYNVMLDVYGKMGRSWDRILELLDEMRSKGLELDEFTCSTV 292
Query: 565 LQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQ 624
+ + + A E+K + + G + +++ + AG+ + L +KE +
Sbjct: 293 ISACGREGMLDEARKFLAELKFNGY-KPGTVTYNSMLQVFGK---AGIYTEALSILKEME 348
Query: 625 RIDCGVHD--WNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKY 682
+C +N + + + + + + M S G +PNA T+ +++ Y G+
Sbjct: 349 DNNCPPDSVTYNELAATYVRAGFLDEGMAVIDTMTSKGVMPNAITYTTVIDAYGK-AGRE 407
Query: 683 TEVTELWGEMKSFASSTSM 701
+ L+ MK + ++
Sbjct: 408 DDALRLFSLMKDLGCAPNV 426
>gi|357438845|ref|XP_003589699.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355478747|gb|AES59950.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 806
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 60/247 (24%), Positives = 97/247 (39%), Gaps = 12/247 (4%)
Query: 447 LQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQ 506
L+P Y L+KA + GK L+ E N DD + VI+ LG +D+
Sbjct: 175 LEPNVFTYNVLLKALCQNGKVDGACKLLV--EMSNKGCDPDDVSYTTVISSMCKLGDVDK 232
Query: 507 AHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQ 566
A +L M V VY +L+ + R +E L+ + G+ + Y ++
Sbjct: 233 AREL--AMKFEPV---VPVYNALIHGVCKECRFKEAFDLMNEMVDRGVDPNVISYSTVIS 287
Query: 567 SKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQ-EVKEGQR 625
+ +L +F M + R Q F L+KG G L ++EG
Sbjct: 288 CLSDMGNVELSLAVFGRMF-VRGCRPNVQTFTSLIKGFFVRGRVGDAVGLWNLMIREG-- 344
Query: 626 IDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEV 685
+ V +N +IH C M +A +M PN T+ +++ G+A G
Sbjct: 345 VSPNVVAYNTLIHGLCSDGNMDEAISVWNQMEKDSIRPNVTTYSTIIYGFAK-SGDLVSA 403
Query: 686 TELWGEM 692
E W +M
Sbjct: 404 CETWNKM 410
>gi|302821741|ref|XP_002992532.1| hypothetical protein SELMODRAFT_135367 [Selaginella moellendorffii]
gi|300139734|gb|EFJ06470.1| hypothetical protein SELMODRAFT_135367 [Selaginella moellendorffii]
Length = 759
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 75/333 (22%), Positives = 135/333 (40%), Gaps = 33/333 (9%)
Query: 329 YNCLLSCHLKFGDLNSASKMVLEMLQRAKEARNSLAAAMLPFN----AVGVNNRTPSEQN 384
YN ++ K GD +A ++ EML++ ++ + FN A G NR
Sbjct: 192 YNAVIDACSKGGDYPTALRIFREMLEQG------MSPDRITFNTLISAAGRANRWEECDR 245
Query: 385 VNCTNSVDLENSGIIENHILSYEDFTKDRKFVALEAEVKRVLQTLLGMLQKQVELITTEH 444
+ ++E GI + D + L A R Q LG +E +
Sbjct: 246 I----FAEMEERGIARD----------DVTYNTLIATYCRGGQMHLG--AALMETMAKSS 289
Query: 445 GILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWL 504
GI +P+ Y ++ + + G E E N V D ++ + LG
Sbjct: 290 GI-EPSVITYSTMIDGYAKLGLAHEAIALF--QEMRNQNVEPDGICYNTMVDIHARLGNF 346
Query: 505 DQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEAL 564
D+AH + M AG Y +LL +Y + + RE +LL + + G + Y AL
Sbjct: 347 DEAHSIRRAMEEAGFAKDIVTYNALLDSYGKQGKFREAMSLLEEMKQRGASPNILTYSAL 406
Query: 565 LQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQ 624
+ + A+ LF+++K++ + + + LV GC +N LL+E+ +
Sbjct: 407 IDAYCKHGFHRDAMALFQDVKKAGL-QPDVVLYSTLVDGCCKNGSPDEALALLEEMADNG 465
Query: 625 RIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMR 657
I V +N+++ + ++ LM K ++R
Sbjct: 466 -IRPNVITYNSLLDAYGRQCLM--VRKTFPKLR 495
>gi|7529747|emb|CAB86932.1| putative protein [Arabidopsis thaliana]
gi|24030379|gb|AAN41351.1| unknown protein [Arabidopsis thaliana]
Length = 526
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/232 (24%), Positives = 105/232 (45%), Gaps = 10/232 (4%)
Query: 448 QPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHV-ITLCISLGWLDQ 506
+P+ Y ++K F+E K KE E D + H+ I + G ++
Sbjct: 149 EPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYEK 208
Query: 507 AHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQ 566
A + M GV S+ Y SL+ E + +EV+ + + + IQ D Y L++
Sbjct: 209 ARKVFSSMVGKGVPQSTVTYNSLMS--FETSY-KEVSKIYDQMQRSDIQPDVVSYALLIK 265
Query: 567 SKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLM--AKLLQEVKEGQ 624
+ + AL +F+EM ++ + R H+ + +L+ A +G++ AK + +
Sbjct: 266 AYGRARREEEALSVFEEMLDAGV-RPTHKAYNILLDAFAI---SGMVEQAKTVFKSMRRD 321
Query: 625 RIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYA 676
RI + + ++ + M+ AEK KR++ G PN T+ +++ GYA
Sbjct: 322 RIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYA 373
Score = 40.0 bits (92), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 58/345 (16%), Positives = 135/345 (39%), Gaps = 68/345 (19%)
Query: 250 KPNTNTFNIALAGCLLFETTRKAEQLLDIM---PRIGVKADSNLLIIMAHIYERNGRREE 306
+P+ T+ I L + + ++AE++ + + + +K D + +M ++Y++ G E+
Sbjct: 149 EPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYEK 208
Query: 307 LRKL-QRHIDEAVNLSDIQFRQFYNCLLSCHLKFGDLNSASKMVLEMLQRAKEARNSLAA 365
RK+ + + V S + YN L+S + +++ + + +QR+
Sbjct: 209 ARKVFSSMVGKGVPQSTVT----YNSLMSFETSYKEVSK----IYDQMQRSD-------- 252
Query: 366 AMLPFNAVGVNNRTPSEQNVNCTNSVDLENSGIIENHILSYEDFTKDRKFVALEAEVKRV 425
I+ ++SY K E E V
Sbjct: 253 ---------------------------------IQPDVVSYALLIKAYGRARREEEALSV 279
Query: 426 LQTLLGMLQKQVELITTEHGILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVS 485
+ +L + G+ +PT K Y L+ AF +G ++ ++ ++
Sbjct: 280 FEEML------------DAGV-RPTHKAYNILLDAFAISGMVEQAKTVFKSMRRD--RIF 324
Query: 486 HDDAALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTAL 545
D + +++ ++ ++ A + + G + Y +L+K Y +AN ++ +
Sbjct: 325 PDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKANDVEKMMEV 384
Query: 546 LRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIP 590
R +GI+ + + ++ + K+ AL +KEM+ +P
Sbjct: 385 YEKMRLSGIKANQTILTTIMDASGRCKNFGSALGWYKEMESCGVP 429
>gi|242079087|ref|XP_002444312.1| hypothetical protein SORBIDRAFT_07g020010 [Sorghum bicolor]
gi|241940662|gb|EES13807.1| hypothetical protein SORBIDRAFT_07g020010 [Sorghum bicolor]
Length = 695
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/234 (21%), Positives = 103/234 (44%), Gaps = 6/234 (2%)
Query: 447 LQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQ 506
++P Y L+ + E +++ EK + S + +I G L++
Sbjct: 401 IRPDHITYNALINGLCKMEMITEAEDLVMEMEKSGVDPSVE--TFNTLIDAYGRAGQLEK 458
Query: 507 AHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQ 566
+L +M G++++ + S++KA+ + + E A+L D + +A Y +++
Sbjct: 459 CFTVLSDMQDKGIKSNVISFGSVVKAFCKNGKIPEAVAILDDMIHKDVVPNAQVYNSIID 518
Query: 567 SKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEV-KEGQR 625
+ I T A L ++MK S + S + +L+KG +N + +L+ + +G R
Sbjct: 519 AYIESGGTEQAFLLVEKMKSSGVSASIFT-YNLLLKGLCKNSQIDEAEELIYNLTNQGLR 577
Query: 626 IDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIG 679
D V +N +I C K A + L+ M P +T+H +++ + G
Sbjct: 578 PD--VVSYNTIISACCNKGDTDRALELLQEMHKYDIRPTLRTYHPLLSALGSAG 629
Score = 48.9 bits (115), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 60/249 (24%), Positives = 106/249 (42%), Gaps = 13/249 (5%)
Query: 502 GWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCY 561
G + +A +L+ + G+ ++++Y +L+ Y + + ++ +S I+ D Y
Sbjct: 349 GKVAKAEQVLEMLVHTGLVPTTAIYNTLINGYCQVRDLQGAFSIFEQMKSRHIRPDHITY 408
Query: 562 EALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVK 621
AL+ + A L EM++S + S + F L+ + AG + K +
Sbjct: 409 NALINGLCKMEMITEAEDLVMEMEKSGVDPS-VETFNTLIDAYGR---AGQLEKCFTVLS 464
Query: 622 EGQR--IDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIG 679
+ Q I V + +V+ FCK + +A L M +PNAQ ++S++ Y G
Sbjct: 465 DMQDKGIKSNVISFGSVVKAFCKNGKIPEAVAILDDMIHKDVVPNAQVYNSIIDAYIESG 524
Query: 680 GKYTEVTELWGE-MKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFI 738
G TE L E MKS S S+ F LL L + A E++ + +
Sbjct: 525 G--TEQAFLLVEKMKSSGVSASI-FTYNLL---LKGLCKNSQIDEAEELIYNLTNQGLRP 578
Query: 739 DKYKYRTLF 747
D Y T+
Sbjct: 579 DVVSYNTII 587
Score = 45.8 bits (107), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 76/347 (21%), Positives = 140/347 (40%), Gaps = 35/347 (10%)
Query: 248 AMKPNTNTFNIALAGCLLFETTRKAEQLLDIMPRIGVKADSNLLIIMAHIYERNGRREEL 307
+M P+ T++I G +R L + GV + I+ + ++G+ +
Sbjct: 295 SMLPDGFTYSILFDGLTRTGDSRTMLSLFGESLKKGVIIGAYTCSILLNGLCKDGK---V 351
Query: 308 RKLQRHIDEAVNLSDIQFRQFYNCLLSCHLKFGDLNSASKMVLEMLQRAKEARNSLAAAM 367
K ++ ++ V+ + YN L++ + + DL A + +M R +
Sbjct: 352 AKAEQVLEMLVHTGLVPTTAIYNTLINGYCQVRDLQGAFSIFEQMKSR------HIRPDH 405
Query: 368 LPFNAVGVNNRTPSEQNVNCTNSV-DLENSGIIENHILSYEDFTKDRKFVALEAEVKRVL 426
+ +NA+ +N E + V ++E SG+ S E F ++++
Sbjct: 406 ITYNAL-INGLCKMEMITEAEDLVMEMEKSGVDP----SVETFNTLIDAYGRAGQLEKCF 460
Query: 427 QTLLGMLQKQVELITTEHGILQPTEKIYIKLVKAFLEAGKTKE----LTHFLIKAEKENL 482
L M K ++ G +VKAF + GK E L + K N
Sbjct: 461 TVLSDMQDKGIKSNVISFG----------SVVKAFCKNGKIPEAVAILDDMIHKDVVPNA 510
Query: 483 QVSHDDAALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREV 542
QV + +I I G +QA L+++M +GV AS Y LLK + ++ E
Sbjct: 511 QVYN------SIIDAYIESGGTEQAFLLVEKMKSSGVSASIFTYNLLLKGLCKNSQIDEA 564
Query: 543 TALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKI 589
L+ + + G++ D Y ++ + + DT AL L +EM + I
Sbjct: 565 EELIYNLTNQGLRPDVVSYNTIISACCNKGDTDRALELLQEMHKYDI 611
>gi|449505568|ref|XP_004162510.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22670,
mitochondrial-like [Cucumis sativus]
Length = 614
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/240 (23%), Positives = 105/240 (43%), Gaps = 10/240 (4%)
Query: 509 DLLDEM-HLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQS 567
+L+DEM HLAG S + +++ A R +E R+ GI D + L+ +
Sbjct: 251 ELVDEMNHLAG-SVSLETMSKVIRRLARAGRHQEAIHAFRNIEKYGISTDTTAMNVLMDA 309
Query: 568 KIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRID 627
+ + A ++F+E+K S IP + F +L+ G + + K++ EV E ++
Sbjct: 310 LVKEASVEDAHNVFRELKCS-IPFN-LASFNVLIHGYCKAKKLDEAWKIMGEV-EKSGLE 366
Query: 628 CGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTE 687
V + I C+++ ++ +K L +M G PN TF +++ + E +
Sbjct: 367 PDVISYTAFIEAHCREKDFRNVDKVLVQMEHKGCKPNVITF-TIIMHALGKAKQINEALK 425
Query: 688 LWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFIDKYKYRTLF 747
++ +MK D S+++ + G E+V ME+ + D Y TL
Sbjct: 426 VYEKMKKEGCVP----DSSFYSSLIFILGKAGRLTDVKEIVEDMEKQGVTPDVLTYNTLI 481
>gi|42572723|ref|NP_974457.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332646343|gb|AEE79864.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 590
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/232 (23%), Positives = 103/232 (44%), Gaps = 10/232 (4%)
Query: 448 QPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHV-ITLCISLGWLDQ 506
+P+ Y ++K F+E K KE E D + H+ I + G ++
Sbjct: 213 EPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYEK 272
Query: 507 AHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQ 566
A + M GV S+ Y SL+ +EV+ + + + IQ D Y L++
Sbjct: 273 ARKVFSSMVGKGVPQSTVTYNSLMSF---ETSYKEVSKIYDQMQRSDIQPDVVSYALLIK 329
Query: 567 SKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLM--AKLLQEVKEGQ 624
+ + AL +F+EM ++ + R H+ + +L+ A +G++ AK + +
Sbjct: 330 AYGRARREEEALSVFEEMLDAGV-RPTHKAYNILLDAFAI---SGMVEQAKTVFKSMRRD 385
Query: 625 RIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYA 676
RI + + ++ + M+ AEK KR++ G PN T+ +++ GYA
Sbjct: 386 RIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYA 437
Score = 40.0 bits (92), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 43/238 (18%), Positives = 99/238 (41%), Gaps = 16/238 (6%)
Query: 354 QRAKEARNSLAAAMLPFNAVGVNNRTPSEQNVNCTNSV-DLENSGIIENHILSYEDFTKD 412
++A++ +S+ +P + V N+ E + + + D I+ ++SY K
Sbjct: 271 EKARKVFSSMVGKGVPQSTVTYNSLMSFETSYKEVSKIYDQMQRSDIQPDVVSYALLIKA 330
Query: 413 RKFVALEAEVKRVLQTLLGMLQKQVELITTEHGILQPTEKIYIKLVKAFLEAGKTKELTH 472
E E V + +L + G+ +PT K Y L+ AF +G ++
Sbjct: 331 YGRARREEEALSVFEEML------------DAGV-RPTHKAYNILLDAFAISGMVEQAKT 377
Query: 473 FLIKAEKENLQVSHDDAALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKA 532
++ ++ D + +++ ++ ++ A + + G + Y +L+K
Sbjct: 378 VFKSMRRD--RIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKG 435
Query: 533 YIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIP 590
Y +AN ++ + R +GI+ + + ++ + K+ AL +KEM+ +P
Sbjct: 436 YAKANDVEKMMEVYEKMRLSGIKANQTILTTIMDASGRCKNFGSALGWYKEMESCGVP 493
>gi|302816960|ref|XP_002990157.1| hypothetical protein SELMODRAFT_131102 [Selaginella moellendorffii]
gi|300142012|gb|EFJ08717.1| hypothetical protein SELMODRAFT_131102 [Selaginella moellendorffii]
Length = 760
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 73/322 (22%), Positives = 131/322 (40%), Gaps = 31/322 (9%)
Query: 329 YNCLLSCHLKFGDLNSASKMVLEMLQRAKEARNSLAAAMLPFN----AVGVNNRTPSEQN 384
YN ++ K GD +A ++ EML++ ++ + FN A G NR
Sbjct: 193 YNAVIDACSKGGDYPTALRIFREMLEQG------MSPDRITFNTLISAAGRANRWEECDR 246
Query: 385 VNCTNSVDLENSGIIENHILSYEDFTKDRKFVALEAEVKRVLQTLLGMLQKQVELITTEH 444
+ ++E GI + D + L A R Q LG +E +
Sbjct: 247 I----FAEMEERGIARD----------DVTYNTLIATYCRGGQMHLG--AALMETMAKSS 290
Query: 445 GILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWL 504
GI +P+ Y ++ + + G E E N V D ++ + LG
Sbjct: 291 GI-EPSVITYSTMIDGYAKLGLAHEAIALF--QEMRNQNVEPDGICYNTMVDIHARLGNF 347
Query: 505 DQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEAL 564
D+AH + M AG Y +LL +Y + + RE +LL + + G + Y AL
Sbjct: 348 DEAHSIRRAMEEAGFAKDIVTYNALLDSYGKQGKFREAMSLLEEMKQRGASPNILTYSAL 407
Query: 565 LQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQ 624
+ + A+ LF+++K++ + + + LV GC +N LL+E+ +
Sbjct: 408 IDAYCKHGFHRDAMALFQDVKKAGL-QPDVVLYSTLVDGCCKNGSPDEALALLEEMADNG 466
Query: 625 RIDCGVHDWNNVIHFFCKKRLM 646
I V +N+++ + ++ LM
Sbjct: 467 -IRPNVITYNSLLDAYGRQCLM 487
>gi|262316879|emb|CAZ44328.1| restoring pentatricopeptide repeat protein homologue [Raphanus
sativus]
Length = 681
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 98/466 (21%), Positives = 173/466 (37%), Gaps = 93/466 (19%)
Query: 248 AMKPNTNTFNIALAG-CLLFETT------RKAEQLLDIMPRIGVKADSNLLIIMAHIYE- 299
++PN T+ + G C + +T RK E++ I P + +I + I +
Sbjct: 208 GLQPNQITYGTIVDGMCKIGDTVSALNLLRKMEEMSHIKPNV---------VIYSAIIDG 258
Query: 300 --RNGRREELRKLQRHIDEAVNLSDIQFRQFYNCLLSCHLKFGDLNSASKMVLEMLQRAK 357
++GR + L + E D+ YNC++ G + A +++ EML+R
Sbjct: 259 LWKDGRHSDAHNLYTEMQEKGIFPDLFT---YNCMIDGFCSSGRWSEAQRLLQEMLER-- 313
Query: 358 EARNSLAAAMLPFNAVGVNNRTPSEQNVNCTNSVDLENSGIIENHILSYEDFTKDRKFVA 417
+ N N L N+ + K+RKF
Sbjct: 314 ------------------------KINPNVVTYSALINA------------YVKERKFFE 337
Query: 418 LEAEVKRVLQTLLGMLQKQVELITTEHGILQPTEKIYIKLVKAFLEAGKTKELTH-FLIK 476
E +L GI+ P Y ++ F + + H F +
Sbjct: 338 AEELYDEMLP----------------RGII-PNTITYNSMIDGFCKQNRLDAAEHMFYVM 380
Query: 477 AEKENLQVSHDDAALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEA 536
A K S D +I +D +LL EM G+ A ++ Y +L+ +
Sbjct: 381 ATK---GCSPDVFTFNTLIDGYCGAKRIDDGTELLHEMTETGLVADTTTYNTLIHGFCLV 437
Query: 537 NRPREVTALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKI------P 590
L + S+G+ D LL AL +FK M++SK+ P
Sbjct: 438 GDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASRP 497
Query: 591 RSG----HQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLM 646
+G Q + +L+ G N L A+ L + + I ++++I+ CK+ +
Sbjct: 498 FNGVEPDVQTYNILISGLI-NEGKFLEAEELYKEMPHRGIVPNTITYSSMINGLCKQSRL 556
Query: 647 QDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEM 692
+A + M S P+ TF+++V+GY G+ + EL+ EM
Sbjct: 557 DEATQMFDSMGSKSFSPDVVTFNTLVSGYCK-AGRVDDGLELFCEM 601
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 62/264 (23%), Positives = 103/264 (39%), Gaps = 52/264 (19%)
Query: 447 LQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLG-WLD 505
LQP + Y +V + G T + L K E ++SH + VI I G W D
Sbjct: 209 LQPNQITYGTIVDGMCKIGDTVSALNLLRKME----EMSHIKPNV--VIYSAIIDGLWKD 262
Query: 506 ----QAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCY 561
AH+L EM G+ Y ++ + + R E LL++ I + Y
Sbjct: 263 GRHSDAHNLYTEMQEKGIFPDLFTYNCMIDGFCSSGRWSEAQRLLQEMLERKINPNVVTY 322
Query: 562 EALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVK 621
AL+ + + ++ A L+ EM +PR G++ +
Sbjct: 323 SALINAYVKERKFFEAEELYDEM----LPR-------------------GIIPNTIT--- 356
Query: 622 EGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGK 681
+N++I FCK+ + AE M + G P+ TF++++ GY +
Sbjct: 357 -----------YNSMIDGFCKQNRLDAAEHMFYVMATKGCSPDVFTFNTLIDGYCG-AKR 404
Query: 682 YTEVTELWGEMKS---FASSTSMN 702
+ TEL EM A +T+ N
Sbjct: 405 IDDGTELLHEMTETGLVADTTTYN 428
Score = 45.1 bits (105), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 41/176 (23%), Positives = 79/176 (44%), Gaps = 3/176 (1%)
Query: 502 GWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAG-IQLDASC 560
G + +A LLD M G++ + Y +++ + LLR I+ +
Sbjct: 192 GRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKIGDTVSALNLLRKMEEMSHIKPNVVI 251
Query: 561 YEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEV 620
Y A++ A +L+ EM+E I + ++ G + +LLQE+
Sbjct: 252 YSAIIDGLWKDGRHSDAHNLYTEMQEKGIFPDLFT-YNCMIDGFCSSGRWSEAQRLLQEM 310
Query: 621 KEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYA 676
E ++I+ V ++ +I+ + K+R +AE+ M G +PN T++SM+ G+
Sbjct: 311 LE-RKINPNVVTYSALINAYVKERKFFEAEELYDEMLPRGIIPNTITYNSMIDGFC 365
Score = 40.4 bits (93), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 29/116 (25%), Positives = 56/116 (48%), Gaps = 3/116 (2%)
Query: 577 ALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRIDCGVHDWNNV 636
A+ LF +M S+ P +F L+ + L+ L Q++ E ++I C V+ +N +
Sbjct: 61 AIDLFSDMVRSR-PLPSVIDFNKLMGVVVRMERPDLVISLYQKM-ERKQIPCDVYSFNIL 118
Query: 637 IHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEM 692
I FC + A ++ LG P+ TF +++ G + + +E +L+ +M
Sbjct: 119 IKCFCSCSKLPFALSTFGKITKLGFQPDVVTFSTLLHGL-CVEDRVSEALDLFHQM 173
>gi|356540361|ref|XP_003538658.1| PREDICTED: pentatricopeptide repeat-containing protein At1g52640,
mitochondrial-like [Glycine max]
Length = 523
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 74/337 (21%), Positives = 128/337 (37%), Gaps = 36/337 (10%)
Query: 443 EHGILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLG 502
E GI +PT + KL+ + K+ F +A+ L + + L I+ +G
Sbjct: 175 EFGI-KPTINDFDKLLFILCKTKHVKQAQQFFDQAKNRFLLTAKTYSIL---ISGWGDIG 230
Query: 503 WLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYE 562
++AH+L M G Y +LL+A + E + D S ++ DA Y
Sbjct: 231 DSEKAHELFQAMLEQGCPVDLLAYNNLLQALCKGGCVDEAKTIFHDMLSKRVEPDAFTYS 290
Query: 563 ALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKE 622
+ S D AL + +M+ I + ++ + C H L + +
Sbjct: 291 IFIHSYCDADDVQSALRVLDKMRRYNILPNVFTYNCIIKRLCKNEHVEEAYLLLDEMISR 350
Query: 623 GQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKY 682
G R D +N + + C + A + + RM LP+ T+ +MV G++
Sbjct: 351 GVRPD--TWSYNAIQAYHCDHCEVNRAIRLMFRMEKDNCLPDRHTY-NMVLKLLIRIGRF 407
Query: 683 TEVTELWGEM--KSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFIDK 740
+VT++WG M K F S S Y+ + GF + ++ + +M ID
Sbjct: 408 DKVTKVWGNMGDKKFYPSVST-----------YSVMIHGFCKKKGKLEEACKYFEMMID- 455
Query: 741 YKYRTLFLKYHKTLYKGKTPKFQTEAQLKKREAALGF 777
+G P T L+ + LGF
Sbjct: 456 ---------------EGIPPYVTTVEMLRNQLLGLGF 477
>gi|449445409|ref|XP_004140465.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g38730-like [Cucumis sativus]
gi|449518107|ref|XP_004166085.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g38730-like [Cucumis sativus]
Length = 578
Score = 57.8 bits (138), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 96/228 (42%), Gaps = 16/228 (7%)
Query: 494 VITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAG 553
+I C G +++A L+ EM L V Y +L+ Y + E + AG
Sbjct: 196 LIHACCKSGDVEKAEQLVCEMELKSVFPDLYTYNTLISLYSRKSLHYEALCVQDRMERAG 255
Query: 554 IQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLM 613
+ D Y +L+ + A+ LF+E+K+ H + L+ G + ++
Sbjct: 256 VSPDIVTYNSLIYGFCKEGKMREAVKLFREIKDVS---PNHVTYTTLIDGYCRVNDFEEA 312
Query: 614 AKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVT 673
+L + V E + + GV +N+V+ C++ ++DA K L M P+ T ++++
Sbjct: 313 LRLCK-VMEAKGLHLGVATYNSVLRKLCEEGRIRDANKLLNEMGERKVEPDNVTCNTLIN 371
Query: 674 GYAAIGGKYTEVTELWGEMKSFASSTSMNFDEEL-LDSVLYTFVRGGF 720
Y I G+MKS S D L LDS Y + GF
Sbjct: 372 AYCKI-----------GDMKSALKVKSKMLDAGLQLDSFTYKALIHGF 408
Score = 48.1 bits (113), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 81/375 (21%), Positives = 142/375 (37%), Gaps = 45/375 (12%)
Query: 327 QFYNCLLSCHLKFGDLNSASKMVLEMLQRAKEARNSLAAAMLPFNA-VGVNNRTPSEQNV 385
YN L+ K GD+ A ++V EM + S+ + +N + + +R
Sbjct: 191 HIYNVLIHACCKSGDVEKAEQLVCEMELK------SVFPDLYTYNTLISLYSRKSLHYEA 244
Query: 386 NCTNSVDLENSGIIENHILSYED----FTKD---RKFVALEAEVKRVLQTLLGMLQKQVE 438
C +E +G+ + I++Y F K+ R+ V L E+K V
Sbjct: 245 LCVQD-RMERAGVSPD-IVTYNSLIYGFCKEGKMREAVKLFREIKDV------------- 289
Query: 439 LITTEHGILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLC 498
P Y L+ + +E E + L + A V+
Sbjct: 290 ---------SPNHVTYTTLIDGYCRVNDFEEALRLCKVMEAKGLHLG--VATYNSVLRKL 338
Query: 499 ISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDA 558
G + A+ LL+EM V + +L+ AY + + + AG+QLD+
Sbjct: 339 CEEGRIRDANKLLNEMGERKVEPDNVTCNTLINAYCKIGDMKSALKVKSKMLDAGLQLDS 398
Query: 559 SCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKG-CAQNHEAGLMAKLL 617
Y+AL+ +D A L M + + G+ + LV G C +E +++ L
Sbjct: 399 FTYKALIHGFCWVRDMESAKELLFCMLDVGLS-PGYCTYSWLVDGYCELGNEGAIISLLD 457
Query: 618 QEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAA 677
+ + +G +D V +I C + + AEK M G ++ + S+ Y
Sbjct: 458 EFLTKGYCVDLSV--CRALIRRLCHQERVGFAEKIYSTMHLRGVSGDSVIYTSLAYAYWK 515
Query: 678 IGGKYTEVTELWGEM 692
GK V+E+ EM
Sbjct: 516 -DGKSNLVSEMLSEM 529
>gi|356561705|ref|XP_003549120.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12775,
mitochondrial-like [Glycine max]
Length = 445
Score = 57.8 bits (138), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 61/261 (23%), Positives = 105/261 (40%), Gaps = 42/261 (16%)
Query: 454 YIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQAHDLLDE 513
Y L+ +AG+TK + L K E + V D +I L A D+ E
Sbjct: 166 YGTLINGLCKAGETKAVARLLRKLEGHS--VKPDVVMYNTIINSLCKNKLLGDACDVYSE 223
Query: 514 MHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQS---KIV 570
M + G+ Y +L+ + + +E +LL + + I D + L+ + +
Sbjct: 224 MIVKGISPDVVTYTTLIHGFCIMGKMKEAFSLLNEMKLKNINPDVYTFSVLIDALGKEGK 283
Query: 571 QKDTPGALHLFKEMK-ESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKE------- 622
+K A+ LF+EMK ++ IP + L+ G +NH LL+E+KE
Sbjct: 284 KKMVDEAMSLFEEMKHKNMIPDI--VTYNSLIDGLCKNHHLERAIALLKEMKEHGIQPDV 341
Query: 623 ------------GQRID-------------CGVHDW--NNVIHFFCKKRLMQDAEKALKR 655
G R++ C ++ W N +I+ CK L +A +
Sbjct: 342 YSYTILLDGLCKGGRLEIAKEFFQHLLVKGCHLNVWPYNVMINGLCKAGLFGEAMDLKSK 401
Query: 656 MRSLGHLPNAQTFHSMVTGYA 676
M G +PNA TF +++ +
Sbjct: 402 MEGKGCMPNAITFRTIICALS 422
Score = 48.1 bits (113), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 70/153 (45%), Gaps = 9/153 (5%)
Query: 597 FEMLVKGCAQNHEAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRM 656
+ L+ G + E +A+LL+++ EG + V +N +I+ CK +L+ DA M
Sbjct: 166 YGTLINGLCKAGETKAVARLLRKL-EGHSVKPDVVMYNTIINSLCKNKLLGDACDVYSEM 224
Query: 657 RSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFV 716
G P+ T+ +++ G+ I GK E L EMK ++N D ++
Sbjct: 225 IVKGISPDVVTYTTLIHGF-CIMGKMKEAFSLLNEMK----LKNINPDVYTFSVLIDALG 279
Query: 717 RGGFFARANEVVAMMEEGK---MFIDKYKYRTL 746
+ G +E +++ EE K M D Y +L
Sbjct: 280 KEGKKKMVDEAMSLFEEMKHKNMIPDIVTYNSL 312
>gi|414592066|tpg|DAA42637.1| TPA: hypothetical protein ZEAMMB73_021738 [Zea mays]
Length = 768
Score = 57.8 bits (138), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 62/275 (22%), Positives = 111/275 (40%), Gaps = 40/275 (14%)
Query: 447 LQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDA-ALGHVITLCISLGWLD 505
LQP +Y+ ++A+ AG+ + E+ +L A A ++ ++ + D
Sbjct: 70 LQP---LYVASIQAYARAGRLRAAVDAF---ERMDLFACPPAAPAYNAIMDALVNAAYHD 123
Query: 506 QAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALL 565
QAH + M AGV + + LK++ RP LLR G + Y ++
Sbjct: 124 QAHKVYVRMLAAGVAPDARTHTVRLKSFCLTGRPHVALRLLRSLSERGCDAKPAAYCTVV 183
Query: 566 QSKIVQKDTPGALHLFKEM--------------------KESKIPRSGHQEFEMLVKGCA 605
+ A HLF EM ++ + SG ++L +G +
Sbjct: 184 RGLYAHGHGYNARHLFDEMLGRDVFPDVATFNNVLHALCQKGDVMESGALLAKVLKRGMS 243
Query: 606 QNH-----------EAGLMAKLLQEVKE-GQRIDCGVHDWNNVIHFFCKKRLMQDAEKAL 653
N E G + + + V+ G + V +N ++ CK +Q+A + L
Sbjct: 244 ANKFTCNIWIRGLCEDGRLEEAVALVERMGAYVAPDVVTYNTLMRGLCKDSKVQEAAQYL 303
Query: 654 KRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTEL 688
RM + G +P+ T+++++ GY G E TEL
Sbjct: 304 GRMMNQGCIPDDFTYNTIIDGYCK-SGMLQEATEL 337
Score = 57.8 bits (138), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 77/175 (44%), Gaps = 8/175 (4%)
Query: 504 LDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEA 563
+ +A L M G Y +++ Y ++ +E T LL+DA G D Y +
Sbjct: 296 VQEAAQYLGRMMNQGCIPDDFTYNTIIDGYCKSGMLQEATELLKDAVFKGFVPDRVTYCS 355
Query: 564 LLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKG-CAQNHEAGLMAKLLQEVKE 622
L+ + D AL LF E ++K + + LVKG C Q GL+ LQ + E
Sbjct: 356 LINGLCAEGDIERALELFNE-AQAKDLKPDLVVYNSLVKGLCRQ----GLILHALQVMNE 410
Query: 623 GQRIDCGVHDW--NNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGY 675
C W N +I+ CK + DA + G+LP+ TF++++ GY
Sbjct: 411 MVEEGCHPDIWTYNIIINGLCKMGNISDAAVVMNDAIVKGYLPDVFTFNTLIDGY 465
Score = 40.8 bits (94), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 51/103 (49%), Gaps = 6/103 (5%)
Query: 633 WNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEM 692
+N +I +CK ++Q+A + LK G +P+ T+ S++ G A G EL+ E
Sbjct: 318 YNTIIDGYCKSGMLQEATELLKDAVFKGFVPDRVTYCSLINGLCA-EGDIERALELFNE- 375
Query: 693 KSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVV-AMMEEG 734
A + + D + +S++ R G A +V+ M+EEG
Sbjct: 376 ---AQAKDLKPDLVVYNSLVKGLCRQGLILHALQVMNEMVEEG 415
Score = 38.9 bits (89), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 49/252 (19%), Positives = 100/252 (39%), Gaps = 9/252 (3%)
Query: 431 GMLQKQVELITTE--HGILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDD 488
GMLQ+ EL+ G + P Y L+ G + +A+ ++L+ D
Sbjct: 329 GMLQEATELLKDAVFKGFV-PDRVTYCSLINGLCAEGDIERALELFNEAQAKDLK--PDL 385
Query: 489 AALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRD 548
++ G + A +++EM G Y ++ + + ++ D
Sbjct: 386 VVYNSLVKGLCRQGLILHALQVMNEMVEEGCHPDIWTYNIIINGLCKMGNISDAAVVMND 445
Query: 549 ARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNH 608
A G D + L+ + AL L + M I + ++ G +
Sbjct: 446 AIVKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWTYGIA-PDVITYNSVLNGLCKAG 504
Query: 609 EAGLMAKLLQE-VKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQT 667
+A + + +E + +G R + +N +I FCK +++A + RM G +P+A +
Sbjct: 505 KAKEVNETFEEMILKGCRPN--AITYNILIENFCKINQLEEASGVIVRMCQDGLVPDAVS 562
Query: 668 FHSMVTGYAAIG 679
F++++ G+ G
Sbjct: 563 FNTLIHGFCRNG 574
>gi|302758676|ref|XP_002962761.1| hypothetical protein SELMODRAFT_165305 [Selaginella moellendorffii]
gi|300169622|gb|EFJ36224.1| hypothetical protein SELMODRAFT_165305 [Selaginella moellendorffii]
Length = 707
Score = 57.8 bits (138), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/199 (22%), Positives = 83/199 (41%), Gaps = 2/199 (1%)
Query: 502 GWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCY 561
G +D+A L+ MH AG Y ++ +A++P+E +L AGI DA Y
Sbjct: 336 GKVDEAFPFLESMHSAGCVPDVVSYNIIIDGLFKASKPKEARQVLDQMIQAGIPPDAVTY 395
Query: 562 EALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVK 621
L+ ++ A+ + K M ++ + + + L+ G +Q + G +L+ E+
Sbjct: 396 NTLMAQFCKEERFDDAVGILKNMIKAGVD-PDNVTYNTLISGLSQTNRLGDAYELMHEML 454
Query: 622 EGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGK 681
+ +N +I CK+ ++ A + M G N T++ + G+
Sbjct: 455 RNGCVVSACTTYNTIIDRLCKEGCLKQALLLMDHMTGHGVEANTVTYNIFIDRLCK-EGR 513
Query: 682 YTEVTELWGEMKSFASSTS 700
E + L EM + S
Sbjct: 514 LDEASSLLSEMDTLRDEVS 532
Score = 48.1 bits (113), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 62/291 (21%), Positives = 117/291 (40%), Gaps = 55/291 (18%)
Query: 502 GWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAG-------- 553
G +D+A +L+ EM G + Y +L+ +A++ + LL S+G
Sbjct: 129 GRIDEAFELVKEMSGNGCTPNLVTYNTLIDGLCKASKTEKAYELLETLVSSGFVPDVVTY 188
Query: 554 -IQLDASCYEA-------LLQSKIVQKDTPGAL-------------------HLFKEMKE 586
I +D C E +++ + + TP + H+FKEM
Sbjct: 189 TIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIFKEMV- 247
Query: 587 SKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLM 646
SK + + LV G ++ K Q+V +G R + +N ++ +CK+ +
Sbjct: 248 SKDCTADALAYVSLVNGYCKSSRT----KEAQKVVDGIRGTPYIDVYNALMDGYCKEGRL 303
Query: 647 QDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEMKSFASSTSMNFDEE 706
+ + M G +PN +T++ ++ G K+ +V E + ++S S+ +
Sbjct: 304 DEIPNVFEDMACRGCVPNIKTYNIVMDGLC----KHGKVDEAFPFLESMHSAGCVP---- 355
Query: 707 LLDSVLYTFVRGGFF-----ARANEVVAMMEEGKMFIDKYKYRTLFLKYHK 752
D V Y + G F A +V+ M + + D Y TL ++ K
Sbjct: 356 --DVVSYNIIIDGLFKASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQFCK 404
Score = 40.8 bits (94), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 62/300 (20%), Positives = 112/300 (37%), Gaps = 20/300 (6%)
Query: 447 LQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQ 506
+ P Y L+ +A KT + + L E + V+ D ++ G ++
Sbjct: 6 VAPDVFTYNILIDGLCKASKTDKASEML--HEMVDRGVTPDTVTFNSIMDGLCKAGKFER 63
Query: 507 AHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQ 566
AH LL M R S Y +L+ + L+ + S+G D Y L
Sbjct: 64 AHSLLAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKTLVDEFVSSGFVPDVVTYSILAD 123
Query: 567 SKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQE-VKEGQR 625
+ A L KEM + + L+ G + + +LL+ V G
Sbjct: 124 GLCKRGRIDEAFELVKEMSGNGCT-PNLVTYNTLIDGLCKASKTEKAYELLETLVSSGFV 182
Query: 626 IDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEV 685
D V + ++ CK+ + A K ++ M G P+ T+ +++ G G+ E
Sbjct: 183 PD--VVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRT-GRVDEA 239
Query: 686 TELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFF--ARANEVVAMME--EGKMFIDKY 741
++ EM S + D++ Y + G+ +R E +++ G +ID Y
Sbjct: 240 HHIFKEMVSKDCTA---------DALAYVSLVNGYCKSSRTKEAQKVVDGIRGTPYIDVY 290
>gi|297843788|ref|XP_002889775.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297335617|gb|EFH66034.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 598
Score = 57.8 bits (138), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 77/345 (22%), Positives = 140/345 (40%), Gaps = 21/345 (6%)
Query: 447 LQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITL---CISLGW 503
+ P Y ++++ ++GK K+ L + LQ + + I + C G
Sbjct: 200 VSPDVVTYNTILRSLCDSGKLKQAMEVLDRM----LQRDCYPDVITYTILIEATCRDSG- 254
Query: 504 LDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEA 563
+ QA LLDEM G Y L+ + R E L D S+G Q + +
Sbjct: 255 VGQAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNI 314
Query: 564 LLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEG 623
+L+S A L +M S F +L+ + GL+ + + +++
Sbjct: 315 ILRSMCSTGRWMDAEKLLADMLRKGFSPS-VVTFNILINFLCRK---GLLGRAIDILEKM 370
Query: 624 QRIDCGVHD--WNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGK 681
+ C + +N ++H FCK++ M A + L+RM S G P+ T+++M+T GK
Sbjct: 371 PKHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCK-DGK 429
Query: 682 YTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFIDKY 741
+ E+ ++ S S + ++D + G +A +++ M + D
Sbjct: 430 VEDAVEILNQLSSKGCSPVLITYNTVIDG----LAKAGKTGKAIKLLDEMRAKDLKPDTI 485
Query: 742 KYRTLFLKYHKTLYKGKTPKFQTE-AQLKKREAALGFKK-WLGLC 784
Y +L + + KF E ++ R A+ F LGLC
Sbjct: 486 TYSSLVGGLSREGKVDEAIKFFHEFERMGVRPNAVTFNSIMLGLC 530
>gi|255661186|gb|ACU25762.1| pentatricopeptide repeat-containing protein [Xeroaloysia
ovatifolia]
Length = 426
Score = 57.8 bits (138), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/195 (23%), Positives = 90/195 (46%), Gaps = 22/195 (11%)
Query: 505 DQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEAL 564
++A++L+ EM G+ +S Y++++ + +A + L + RS+G+++D + L
Sbjct: 236 EKANNLIQEMQNRGIEPNSITYSTIISIWGKAGKLDRAAMLFQKLRSSGVEID----QVL 291
Query: 565 LQSKIVQKDTPG----ALHLFKEMKE-SKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQE 619
Q+ IV + G A L E+K IPR ++ G + EA + + Q
Sbjct: 292 YQTMIVAYEKAGLVAHAKRLLHELKSPDNIPRDTAIH---ILAGAGRIEEATYVFR--QA 346
Query: 620 VKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAI- 678
+ G+ D V + +IH F K + + + +MR LG+ P++ ++ Y +
Sbjct: 347 IDAGEVRDITV--FERMIHLFSKYKKYANVVEVFDKMRGLGYFPDSNVIALVLNAYGKLH 404
Query: 679 -----GGKYTEVTEL 688
G Y E+ E+
Sbjct: 405 EFDKANGVYMEMQEV 419
Score = 47.4 bits (111), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 68/314 (21%), Positives = 128/314 (40%), Gaps = 25/314 (7%)
Query: 447 LQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQ 506
L P Y L+ F + G +L K E++ +V D ++I L L +
Sbjct: 5 LSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQD--RVPGDLVLYSNLIELSRKLCDYSK 62
Query: 507 AHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQ 566
A + + +G Y +++ + +A RE +L+ + R+AG+ + + Y LL
Sbjct: 63 AISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVMPNTASYTTLLT 122
Query: 567 SKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGL-MAKLLQEVKEGQR 625
+ K AL +F EM+E K ++ + L MAK ++ G R
Sbjct: 123 MYVENKKFLEALSVFSEMREIKCL------LDLTTCNIMIDVYGQLGMAKEADKLFWGMR 176
Query: 626 ---IDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKY 682
I+ V +N ++ + L +A + M+ + N T++SM+ Y GK
Sbjct: 177 KMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIVQNVVTYNSMMMIY----GKT 232
Query: 683 TE---VTELWGEMKSFA-SSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFI 738
E L EM++ S+ + +++ + + G RA + + + I
Sbjct: 233 LEHEKANNLIQEMQNRGIEPNSITY-----STIISIWGKAGKLDRAAMLFQKLRSSGVEI 287
Query: 739 DKYKYRTLFLKYHK 752
D+ Y+T+ + Y K
Sbjct: 288 DQVLYQTMIVAYEK 301
>gi|224123318|ref|XP_002319049.1| predicted protein [Populus trichocarpa]
gi|222857425|gb|EEE94972.1| predicted protein [Populus trichocarpa]
Length = 585
Score = 57.8 bits (138), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 97/218 (44%), Gaps = 6/218 (2%)
Query: 504 LDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEA 563
L++A LL EM+ + + Y++L++ + +A RP+ L ++ S G+ D+ Y
Sbjct: 367 LNEAKTLLSEMYDRDLTPDTVTYSTLMQGFCQAGRPQVAQKLFKEMCSYGLLPDSITYSI 426
Query: 564 LLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEG 623
LL A L K M+ESKI + +L++G + +L +
Sbjct: 427 LLDGLCKHGHLDEAFRLLKAMQESKI-EPHICIYNILIQGMCNFGKLEAARELFSNLFV- 484
Query: 624 QRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYT 683
+ I V + +I K+ L +A + ++M G LPN+ T++ + G+ G
Sbjct: 485 KGIQPSVVTYTVMISGLLKEGLSNEACEMFRKMVVNGCLPNSCTYNVAIQGFLRNGDPSN 544
Query: 684 EV---TELWGEMKSFASST-SMNFDEELLDSVLYTFVR 717
V E+ G S SST M D E D ++ F+R
Sbjct: 545 AVRLIEEMVGRGFSADSSTFQMLLDLESNDEIISRFMR 582
Score = 43.5 bits (101), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 40/180 (22%), Positives = 75/180 (41%), Gaps = 2/180 (1%)
Query: 500 SLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDAS 559
+LG L++A L +M V ++ + L+ + E + G++ DA
Sbjct: 258 NLGQLNEATSLFKQMIGRNVMPNTVTFTILVDGLCKEGMILEARRVFEMMTENGVEPDAY 317
Query: 560 CYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQE 619
Y AL+ +Q A LF M S + + +L+ G ++ LL E
Sbjct: 318 TYSALMDGYCLQSQMDEAQKLFDIMVGKGFAPS-VRVYNILINGHCKSRRLNEAKTLLSE 376
Query: 620 VKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIG 679
+ + + + ++ ++ FC+ Q A+K K M S G LP++ T+ ++ G G
Sbjct: 377 MYD-RDLTPDTVTYSTLMQGFCQAGRPQVAQKLFKEMCSYGLLPDSITYSILLDGLCKHG 435
Score = 42.0 bits (97), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 44/216 (20%), Positives = 74/216 (34%), Gaps = 43/216 (19%)
Query: 468 KELTHF----LIKAEKENLQVSHDDAALGHVITLCISLGWLDQAHDLLDEMHLAGVRASS 523
++ HF L K K LQ +H G ++ S + A L DE+ G S
Sbjct: 119 RDHVHFAFSALGKMFKLGLQPTH--VTFGTLLNGLCSKAKIIDAVKLFDEIGKMGFAPSL 176
Query: 524 SVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKE 583
Y +++K + LL+ G + D Y ++ S + A++ F E
Sbjct: 177 ITYTTIIKGLCKIGHTTNALQLLKKMEEKGCKPDVVAYNTVIDSLCKDRRANEAMYFFSE 236
Query: 584 MKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKK 643
M + IP + V +++++H FC
Sbjct: 237 MVDQGIPPN-------------------------------------VVTYSSILHGFCNL 259
Query: 644 RLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIG 679
+ +A K+M +PN TF +V G G
Sbjct: 260 GQLNEATSLFKQMIGRNVMPNTVTFTILVDGLCKEG 295
>gi|224145304|ref|XP_002336216.1| predicted protein [Populus trichocarpa]
gi|222832672|gb|EEE71149.1| predicted protein [Populus trichocarpa]
Length = 616
Score = 57.8 bits (138), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 57/244 (23%), Positives = 96/244 (39%), Gaps = 9/244 (3%)
Query: 433 LQKQVELITTEHGILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALG 492
L KQ+EL L P L+ F + + L K K LQ++
Sbjct: 144 LSKQMELAG-----LSPDTYTLHMLINCFFQLQRVDLGFSVLAKIIKLGLQLTI--VTFN 196
Query: 493 HVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSA 552
+I +G QA +L D+M G + Y +++ + L R A
Sbjct: 197 TLINGLCKVGKFGQAVELFDDMVARGYQPDVHTYTTIINGLCKIGETVAAAGLFRKMGEA 256
Query: 553 GIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGL 612
G Q D Y ++ S + AL +F MK I + + L++G
Sbjct: 257 GCQPDVVTYSTIIDSLCKDRRVNEALDIFSYMKAKGISPNIFT-YNSLIQGLCNFSRWRE 315
Query: 613 MAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMV 672
+ +L E+ I + ++ +I+ FCK+ + +A LK M +G PN T+ S++
Sbjct: 316 ASAMLNEMMS-LNIMPNIVTFSLLINIFCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLM 374
Query: 673 TGYA 676
GY+
Sbjct: 375 NGYS 378
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 42/190 (22%), Positives = 82/190 (43%), Gaps = 3/190 (1%)
Query: 504 LDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEA 563
+ +A L +EM G+ Y +L+ + R RE L ++ + G D Y
Sbjct: 418 IGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLREAHDLFKNMLTNGNLPDLCTYSI 477
Query: 564 LLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEG 623
LL Q A LF+ M+ + + + + +L+ ++ KL E+
Sbjct: 478 LLDGFCKQGYLAKAFRLFRAMQSTYL-KPNMVMYNILIDAMCKSRNLKEARKLFSELFV- 535
Query: 624 QRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYT 683
Q + V + +I+ CK+ L+ +A +A + M G PN +++ ++ G+ + +
Sbjct: 536 QGLQPNVQIYTTIINGLCKEGLLDEALEAFRNMEEDGCPPNEFSYNVIIRGFLQHKDE-S 594
Query: 684 EVTELWGEMK 693
+L GEM+
Sbjct: 595 RAVQLIGEMR 604
Score = 43.9 bits (102), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 42/193 (21%), Positives = 79/193 (40%), Gaps = 5/193 (2%)
Query: 503 WLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYE 562
+ D L +M LAG+ + L+ + + R ++L G+QL +
Sbjct: 137 YHDAVISLSKQMELAGLSPDTYTLHMLINCFFQLQRVDLGFSVLAKIIKLGLQLTIVTFN 196
Query: 563 ALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKE 622
L+ A+ LF +M H + ++ G + E A L +++ E
Sbjct: 197 TLINGLCKVGKFGQAVELFDDMVARGYQPDVH-TYTTIINGLCKIGETVAAAGLFRKMGE 255
Query: 623 -GQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGK 681
G + D V ++ +I CK R + +A M++ G PN T++S++ G +
Sbjct: 256 AGCQPD--VVTYSTIIDSLCKDRRVNEALDIFSYMKAKGISPNIFTYNSLIQGLCNF-SR 312
Query: 682 YTEVTELWGEMKS 694
+ E + + EM S
Sbjct: 313 WREASAMLNEMMS 325
>gi|242084242|ref|XP_002442546.1| hypothetical protein SORBIDRAFT_08g021630 [Sorghum bicolor]
gi|241943239|gb|EES16384.1| hypothetical protein SORBIDRAFT_08g021630 [Sorghum bicolor]
Length = 735
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 52/245 (21%), Positives = 102/245 (41%), Gaps = 5/245 (2%)
Query: 435 KQVELITTEHGILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHV 494
++V + G+ + T + + L+ ++ AGK + L +K+ + D
Sbjct: 146 RRVMRLMIRRGMPRGTRQ-FAHLMLSYSRAGKLRSAMRVLQLMQKDG--CAPDICICNMA 202
Query: 495 ITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGI 554
+ + + G +D+A + + M GV Y L+K A R + ++ G
Sbjct: 203 VNVLVVAGRIDKALEFAERMRRVGVDPDVVTYNCLIKGLCGARRIVDALEMISSMLQNGC 262
Query: 555 QLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMA 614
D Y ++ +K +L + M ++ I + ML+ G A++ A
Sbjct: 263 LPDKISYFTVMSFLCKEKRVADVQNLLERMSDAGI-FPDQVTYNMLIHGLAKHGHADEAL 321
Query: 615 KLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTG 674
L+E EG+R ++ +H FC M +A++ + M S G P+ T+ ++V G
Sbjct: 322 SFLRE-SEGKRFRVDEVGYSATVHSFCLNGRMAEAKEIIGEMISKGCRPDVVTYSAVVDG 380
Query: 675 YAAIG 679
+ IG
Sbjct: 381 FCRIG 385
>gi|449436958|ref|XP_004136259.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g18475-like [Cucumis sativus]
gi|449497032|ref|XP_004160294.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g18475-like [Cucumis sativus]
Length = 504
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/229 (20%), Positives = 96/229 (41%), Gaps = 6/229 (2%)
Query: 520 RASSSVYASLLKAYIEANRPREVTALLRDARSA-GIQLDASCYEALLQSKIVQKDTPGAL 578
+ S ++ L +E++R LL +ARS ++ + + L++ D A
Sbjct: 151 KPSLKAISTCLNLLVESDRVDLARKLLVNARSKLNLRPNTCIFNILVKHHCRNGDLQAAF 210
Query: 579 HLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRIDCGVHDWNNVIH 638
+ KEMK +++ + L+ G +N + + +E+ I +N +I+
Sbjct: 211 EVVKEMKSARVSYPNLVTYSTLIGGLCENGKLKEAIEFFEEMVSKDNILPDALTYNILIN 270
Query: 639 FFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEMKSFASS 698
FC++ + A L+ M+S G PN + ++ GY G+ E E++ E+KS
Sbjct: 271 GFCQRGKVDRARTILEFMKSNGCSPNVFNYSVLMNGYCK-EGRLQEAKEVFNEIKSLG-- 327
Query: 699 TSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFIDKYKYRTLF 747
M D +++ R G A E++ M++ D + +
Sbjct: 328 --MKPDTISYTTLINCLCRTGRVDEATELLQQMKDKDCRADTVTFNVML 374
>gi|356513749|ref|XP_003525573.1| PREDICTED: pentatricopeptide repeat-containing protein At2g26790,
mitochondrial-like [Glycine max]
Length = 819
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/259 (20%), Positives = 101/259 (38%), Gaps = 9/259 (3%)
Query: 490 ALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDA 549
A + C+SL D+A D L + G+ L +E + A+
Sbjct: 162 AFNGFVKTCVSLNMFDKAIDFLFQTRRRGILPDVLTCNFLFNRLVEHGEVDKALAVYEQL 221
Query: 550 RSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKE-SKIPRSGHQEFEMLVKGCAQNH 608
+ G + Y ++++ + D L +F+EM+ IP S F ++G NH
Sbjct: 222 KRFGFIPNCYTYAIVIKALCKKGDLKQPLCVFEEMERVGVIPHS--YCFAAYIEGLCNNH 279
Query: 609 EAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTF 668
+ L ++LQ ++G V+ + V+ FC + + +A+ M G +P+ +
Sbjct: 280 RSDLGYEVLQAFRKGNA-PLEVYAYTAVVRGFCNEMKLDEAQGVFDDMERQGVVPDVYVY 338
Query: 669 HSMVTGYAAIGGKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVV 728
S++ GY L EM S T+ ++ +L+ G +
Sbjct: 339 SSLIHGYCK-SHNLLRALALHDEMISRGVKTNC----VVVSCILHCLGEMGMTLEVVDQF 393
Query: 729 AMMEEGKMFIDKYKYRTLF 747
++E MF+D Y +F
Sbjct: 394 KELKESGMFLDGVAYNIVF 412
Score = 47.4 bits (111), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 43/191 (22%), Positives = 84/191 (43%), Gaps = 3/191 (1%)
Query: 504 LDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEA 563
LD+A + D+M GV VY+SL+ Y +++ AL + S G++ +
Sbjct: 316 LDEAQGVFDDMERQGVVPDVYVYSSLIHGYCKSHNLLRALALHDEMISRGVKTNCVVVSC 375
Query: 564 LLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEG 623
+L T + FKE+KES + G + ++ + ++++E+K
Sbjct: 376 ILHCLGEMGMTLEVVDQFKELKESGMFLDG-VAYNIVFDALCMLGKVEDAVEMVEEMK-S 433
Query: 624 QRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYT 683
+R+ V + +I+ +C + + A K M+ G P+ T++ + G + G
Sbjct: 434 KRLGLDVKHYTTLINGYCLQGDLVTAFNMFKEMKEKGLKPDIVTYNVLAAGLSR-NGHAR 492
Query: 684 EVTELWGEMKS 694
E +L M+S
Sbjct: 493 ETVKLLDFMES 503
Score = 43.9 bits (102), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 66/292 (22%), Positives = 115/292 (39%), Gaps = 35/292 (11%)
Query: 494 VITLCI-----SLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRD 548
V+ CI +G + D E+ +G+ Y + A + + ++ +
Sbjct: 371 VVVSCILHCLGEMGMTLEVVDQFKELKESGMFLDGVAYNIVFDALCMLGKVEDAVEMVEE 430
Query: 549 ARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNH 608
+S + LD Y L+ +Q D A ++FKEMKE + + + +L G ++N
Sbjct: 431 MKSKRLGLDVKHYTTLINGYCLQGDLVTAFNMFKEMKEKGL-KPDIVTYNVLAAGLSRNG 489
Query: 609 EAGLMAKLLQEVK-EGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQT 667
A KLL ++ +G + + H +I C + +AE + N +
Sbjct: 490 HARETVKLLDFMESQGMKPNSTTHKM--IIEGLCSGGKVLEAEVYFNSLED----KNIEI 543
Query: 668 FHSMVTGYAA---IGGKYTEVTELW--GEMKSFASS------TSMNFDEE----LLDSVL 712
+ +MV GY + Y +L G+M AS M D E LLD +L
Sbjct: 544 YSAMVNGYCETDLVKKSYEVFLKLLNQGDMAKKASCFKLLSKLCMTGDIEKAVKLLDRML 603
Query: 713 YTFVRGGFFARANEVVAMMEEGKMFIDKYKYRTLFLKYHKTLYKGKTPKFQT 764
+ V + + A+ + G D RTLF + +++G TP T
Sbjct: 604 LSNVEPSKIMYSKILAALCQAG----DMKNARTLFDVF---VHRGFTPDVVT 648
Score = 43.5 bits (101), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 91/204 (44%), Gaps = 22/204 (10%)
Query: 405 SYEDFTK--DRKFVALEAEVKRVLQTLL--GMLQKQVELITTEH-GILQPTEKIYIKLVK 459
SYE F K ++ +A +A ++L L G ++K V+L+ ++P++ +Y K++
Sbjct: 560 SYEVFLKLLNQGDMAKKASCFKLLSKLCMTGDIEKAVKLLDRMLLSNVEPSKIMYSKILA 619
Query: 460 AFLEAGKTKEL-THFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQAHDLLDEMHLAG 518
A +AG K T F + + + D +I + L +AHDL +M G
Sbjct: 620 ALCQAGDMKNARTLFDVFVHR---GFTPDVVTYTIMINSYCRMNCLQEAHDLFQDMKRRG 676
Query: 519 VRASSSVYASLL----KAYI----EANRPREVTAL-----LRDARSAGIQLDASCYEALL 565
++ + LL K Y+ ++ R+ T+L LRD I D CY L+
Sbjct: 677 IKPDVITFTVLLDGSLKEYLGKRFSSHGKRKTTSLYVSTILRDMEQMKINPDVVCYTVLM 736
Query: 566 QSKIVQKDTPGALHLFKEMKESKI 589
+ + A+ LF +M ES +
Sbjct: 737 DGHMKTDNFQQAVSLFDKMIESGL 760
>gi|242092012|ref|XP_002436496.1| hypothetical protein SORBIDRAFT_10g003720 [Sorghum bicolor]
gi|241914719|gb|EER87863.1| hypothetical protein SORBIDRAFT_10g003720 [Sorghum bicolor]
Length = 698
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 63/280 (22%), Positives = 107/280 (38%), Gaps = 49/280 (17%)
Query: 493 HVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSA 552
+ + L +S L A D M GV + Y L++A +E ++LRD R A
Sbjct: 127 NAVLLALSDASLPSARRFFDSMLSDGVAPNVYTYNILVRALCGRGHRKEALSVLRDMRGA 186
Query: 553 GIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGL 612
G +A Y L+ + + A L M+ E GL
Sbjct: 187 GCDPNAVTYNTLVAAFCRAGEVDRAERLVDMMR-----------------------EGGL 223
Query: 613 MAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMV 672
L+ +N+V++ CK M+DA K M G P+ +++++V
Sbjct: 224 KPNLVT--------------FNSVVNGICKAGRMEDARKVFDEMVKEGLAPDGVSYNTLV 269
Query: 673 TGYAAIGGKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMME 732
GY +G + E ++ EM + + D S+++ + G RA +V M
Sbjct: 270 GGYCKVGCSH-EALSVFAEM----TRKGIMPDVVTFTSLIHVMCKAGNLERAVGLVREMR 324
Query: 733 EGKMFIDKYKYRTLFLKYHKTLYKGKTPKFQTEAQLKKRE 772
E + +++ + L + K KG F +A L RE
Sbjct: 325 ERGLQMNEITFTALIDGFCK---KG----FLDDALLAVRE 357
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 53/234 (22%), Positives = 102/234 (43%), Gaps = 6/234 (2%)
Query: 447 LQPTEKIYIKLVKAFLEAGKTKE-LTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLD 505
L P Y LV + + G + E L+ F AE + D +I + G L+
Sbjct: 258 LAPDGVSYNTLVGGYCKVGCSHEALSVF---AEMTRKGIMPDVVTFTSLIHVMCKAGNLE 314
Query: 506 QAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALL 565
+A L+ EM G++ + + +L+ + + + +R+ R IQ CY AL+
Sbjct: 315 RAVGLVREMRERGLQMNEITFTALIDGFCKKGFLDDALLAVREMRQCRIQPSVVCYNALI 374
Query: 566 QSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQR 625
+ A L +EM E+K + + ++ +N + +L Q++ E
Sbjct: 375 NGYCMVGRMDEARELVREM-EAKGVKPDVVTYSTILSAYCKNGDTHSAFQLNQQMLENGV 433
Query: 626 IDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIG 679
+ + ++++I C+++ + DA K M SLG P+ T+ S++ G+ G
Sbjct: 434 LPDAI-TYSSLIRVLCEEKRLGDAHVLFKNMISLGLQPDEVTYTSLIDGHCKEG 486
Score = 44.7 bits (104), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 98/457 (21%), Positives = 176/457 (38%), Gaps = 43/457 (9%)
Query: 251 PNTNTFNIALAGCLLFETTRKAEQLLDIMPRIGVKADSNLLIIMAHIYERNGRREELRKL 310
PN T+N +A +AE+L+D+M G+K + + + + GR E+ RK+
Sbjct: 190 PNAVTYNTLVAAFCRAGEVDRAERLVDMMREGGLKPNLVTFNSVVNGICKAGRMEDARKV 249
Query: 311 QRHIDEAVNLSDIQFRQFYNCLLSCHLKFGDLNSASKMVLEMLQRAKEAR----NSLAAA 366
DE V YN L+ + K G + A + EM ++ SL
Sbjct: 250 ---FDEMVKEGLAPDGVSYNTLVGGYCKVGCSHEALSVFAEMTRKGIMPDVVTFTSLIHV 306
Query: 367 MLPFN----AVGV----NNRTPSEQNVNCTNSVD-LENSGIIENHILSYEDFTKDR---K 414
M AVG+ R + T +D G +++ +L+ + + R
Sbjct: 307 MCKAGNLERAVGLVREMRERGLQMNEITFTALIDGFCKKGFLDDALLAVREMRQCRIQPS 366
Query: 415 FVALEAEVKRVLQTLLGMLQKQVELIT-TEHGILQPTEKIYIKLVKAFLEAGKTKELTHF 473
V A + ++G + + EL+ E ++P Y ++ A+ + G T + F
Sbjct: 367 VVCYNALING--YCMVGRMDEARELVREMEAKGVKPDVVTYSTILSAYCKNGDTH--SAF 422
Query: 474 LIKAEKENLQVSHDDAALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAY 533
+ + V D +I + L AH L M G++ Y SL+ +
Sbjct: 423 QLNQQMLENGVLPDAITYSSLIRVLCEEKRLGDAHVLFKNMISLGLQPDEVTYTSLIDGH 482
Query: 534 IEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHL-FKEMKESKIPRS 592
+ +L + AG+ D Y L+ T A L FK E +P
Sbjct: 483 CKEGNVERALSLHDEMVKAGVLPDVVTYSVLINGLSKSARTKEAQRLLFKLYHEEPVP-- 540
Query: 593 GHQEFEMLVKGCAQNHEAGLMAKLLQE------VKEGQRIDCGVHD--WN-------NVI 637
+ +++ L++ C +N E + LL+ + E ++ + D WN +I
Sbjct: 541 ANIKYDALMR-CCRNAELKSVLALLKGFCMKGLMNEADKVYQSILDRNWNLDGSVYSVLI 599
Query: 638 HFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTG 674
H C++ + A K+M G PN+ + S++ G
Sbjct: 600 HGHCREGNVMKALSFHKQMLQCGFAPNSTSTISLIRG 636
>gi|297830004|ref|XP_002882884.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297328724|gb|EFH59143.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 409
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 64/263 (24%), Positives = 113/263 (42%), Gaps = 15/263 (5%)
Query: 448 QPTEKIYIKLVKAFLEAGKTKELTHFL--IKAEKENLQVSHDDAALGHVITLCISL-GWL 504
QPTE +Y L+ F +A E+ + IK EK + + +++ + +L G +
Sbjct: 92 QPTESLYALLINKFGQAKMFDEIEEVMSTIKLEK---RCRFSEDFFYNLMRIYGNLAGRI 148
Query: 505 DQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEAL 564
++A ++L M G S+ + +L + A E+ + A G+++DA C L
Sbjct: 149 NRAIEILFGMPDFGCWPSAKSFNFILNLLVSAKLFDEIHKIFVSAPKLGVEIDACCLNIL 208
Query: 565 LQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQ 624
++ + AL L E + K R F L++G + KLL+ + E +
Sbjct: 209 IKGLCESGNLEAALQLLDEFPKQK-SRPNVMTFSPLIRGFCNKGKFEEAFKLLERM-EKE 266
Query: 625 RIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTE 684
RI+ +N +I KK +++ L+RM+ G PN T+ ++ G + E
Sbjct: 267 RIEPDTITFNILISGLRKKGRVEEGIDLLERMKLKGCEPNPGTYQEVLYGLLD-KKRNLE 325
Query: 685 VTEL------WGEMKSFASSTSM 701
E+ WG SF S M
Sbjct: 326 AKEMMSQMISWGMRPSFLSYKKM 348
>gi|224069254|ref|XP_002302938.1| predicted protein [Populus trichocarpa]
gi|222844664|gb|EEE82211.1| predicted protein [Populus trichocarpa]
Length = 599
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 83/179 (46%), Gaps = 4/179 (2%)
Query: 502 GWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCY 561
G +D A ++ +M G++A +Y +L+ + RE + + G+ D Y
Sbjct: 351 GRVDLALEIYQQMFTKGLKADLVLYNTLIDGLCKGGYFREARKFVGEMTKRGLIPDKFTY 410
Query: 562 EALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQE-V 620
LL + D AL + KEM + I + + F ++ G ++ + + L+E +
Sbjct: 411 TTLLDGSCKEGDLELALEMRKEMVKEGI-QLDNVAFTAIISGLCRDGKIVDAERTLREML 469
Query: 621 KEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIG 679
+ G + D G + V+ FCKK ++ K LK M+S GH+P T++ ++ G G
Sbjct: 470 RAGLKPDDGT--YTMVMDGFCKKGDVKMGFKLLKEMQSDGHIPGVITYNVLMNGLCKQG 526
Score = 55.8 bits (133), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 46/203 (22%), Positives = 91/203 (44%), Gaps = 6/203 (2%)
Query: 502 GWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCY 561
G+ +A + EM G+ Y +LL + + ++ GIQLD +
Sbjct: 386 GYFREARKFVGEMTKRGLIPDKFTYTTLLDGSCKEGDLELALEMRKEMVKEGIQLDNVAF 445
Query: 562 EALLQSKIVQKDTPGALHLFKEMKESKI-PRSGHQEFEMLVKGCAQNHEAGLMAKLLQEV 620
A++ A +EM + + P G + M++ G + + + KLL+E+
Sbjct: 446 TAIISGLCRDGKIVDAERTLREMLRAGLKPDDG--TYTMVMDGFCKKGDVKMGFKLLKEM 503
Query: 621 KEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIG- 679
+ I GV +N +++ CK+ +++A+ L M +LG +P+ T++ ++ G+ G
Sbjct: 504 QSDGHIP-GVITYNVLMNGLCKQGQVKNADMLLNAMLNLGVVPDDITYNILLQGHCKHGK 562
Query: 680 -GKYTEVTELWGEMKSFASSTSM 701
G + V G + +AS S+
Sbjct: 563 LGDFQNVKTEMGLVSDYASYRSL 585
Score = 55.8 bits (133), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 58/265 (21%), Positives = 105/265 (39%), Gaps = 44/265 (16%)
Query: 518 GVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQKDTPGA 577
G +SS V+ +L+ Y E + R + +++ + + LL+ I A
Sbjct: 157 GTLSSSFVFDALMSVYTEFGYVSDAIQCFRLTKKHNLKIPFNGCKCLLERMIKMSSPMVA 216
Query: 578 LHLFKEMKESKIP------------------------------RSGHQ----EFEMLVKG 603
L + E+ +S P ++G Q F L+ G
Sbjct: 217 LEFYLEILDSGYPPNVYTFNVLMNRLCKEGKVKDAQLIFDEIRKTGLQPTAVSFNTLING 276
Query: 604 CAQ--NHEAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGH 661
+ N E G K+ V E R+ V ++ +I CK+ ++DA K M G
Sbjct: 277 YCKSGNLEEGFRLKM---VMEEFRVFPDVFTYSALIDGLCKECQLEDANHLFKEMCDRGL 333
Query: 662 LPNAQTFHSMVTGYAAIGGKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFF 721
+PN TF +++ G G+ E++ +M + + D L ++++ +GG+F
Sbjct: 334 VPNDVTFTTLINGQCK-NGRVDLALEIYQQM----FTKGLKADLVLYNTLIDGLCKGGYF 388
Query: 722 ARANEVVAMMEEGKMFIDKYKYRTL 746
A + V M + + DK+ Y TL
Sbjct: 389 REARKFVGEMTKRGLIPDKFTYTTL 413
>gi|224125496|ref|XP_002319601.1| predicted protein [Populus trichocarpa]
gi|222857977|gb|EEE95524.1| predicted protein [Populus trichocarpa]
Length = 460
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 99/230 (43%), Gaps = 24/230 (10%)
Query: 502 GWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCY 561
G +D+A LL EM + Y++L++ + + RP+E LL++ S G+ + Y
Sbjct: 234 GRIDEAKGLLAEMSHKSLTPDIFTYSTLMRGFCQVGRPQEAQELLKEMCSYGLLPNLITY 293
Query: 562 EALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKG--------CAQNHEAGLM 613
+L A L K M+ESKI + + +L++G A+ + L
Sbjct: 294 SIVLDGLCKHGHLDEAFELLKAMQESKIEPNIFI-YTILIEGMCTFGKLEAARELFSNLF 352
Query: 614 AKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVT 673
K +Q V + +I K L +A + + M G LPN+ T++ ++
Sbjct: 353 VKGIQPT---------VVTYTVMISGLLKGGLSNEACELFREMAVNGCLPNSCTYNVIIQ 403
Query: 674 GYAAIGGKYTEVTELWGEM--KSFASSTS---MNFDEELLDSVLYTFVRG 718
G+ G L EM K F++ +S M D E D ++ F+RG
Sbjct: 404 GFLR-NGDTPNAVRLIEEMVGKGFSADSSTFRMLSDLESSDEIISQFMRG 452
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 56/252 (22%), Positives = 103/252 (40%), Gaps = 17/252 (6%)
Query: 447 LQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGH--VITLCISLGWL 504
LQPT + L+ K + +K E +++ H+ + + +I +G
Sbjct: 6 LQPTLVTFNTLLSGLCSKAKIMDA----VKLFDEMVKMGHEPDVITYSTIINGLCKMGNT 61
Query: 505 DQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEAL 564
A LL +M G + + Y +++ + + E + GI D Y ++
Sbjct: 62 TMALQLLKKMEEKGCKPNVVAYNTIIDSLCKDRLVTEAMDFFSEMVKEGIPPDVFTYSSI 121
Query: 565 LQSKIVQKDTPGALHLFKEMKESK-IPRSGHQEFEMLVKGCAQNH---EAGLMAKLLQEV 620
L A LFK+M E IP F +L+ G + EA L+ + + E
Sbjct: 122 LHGFCNLGRVNEATSLFKQMVERNVIPN--KVTFTILIDGLCKKRMISEAWLVFETMTE- 178
Query: 621 KEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGG 680
+G D V+ +N ++ +C + M +A+K M G PN ++++ ++ G+ G
Sbjct: 179 -KGLEPD--VYTYNALVDGYCSRSQMDEAQKLFNIMDRKGCAPNVRSYNILINGHCK-SG 234
Query: 681 KYTEVTELWGEM 692
+ E L EM
Sbjct: 235 RIDEAKGLLAEM 246
Score = 42.4 bits (98), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 19/85 (22%), Positives = 39/85 (45%)
Query: 500 SLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDAS 559
+ G L+ A +L + + G++ + Y ++ ++ E L R+ G ++
Sbjct: 337 TFGKLEAARELFSNLFVKGIQPTVVTYTVMISGLLKGGLSNEACELFREMAVNGCLPNSC 396
Query: 560 CYEALLQSKIVQKDTPGALHLFKEM 584
Y ++Q + DTP A+ L +EM
Sbjct: 397 TYNVIIQGFLRNGDTPNAVRLIEEM 421
>gi|449494638|ref|XP_004159605.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g49730-like [Cucumis sativus]
Length = 664
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 73/325 (22%), Positives = 143/325 (44%), Gaps = 38/325 (11%)
Query: 432 MLQKQVELIT--TEHGILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDA 489
M++K VE++ ++G +P E ++ L+ A + G KE E+++V +
Sbjct: 215 MVKKAVEVLDEMPKYGC-EPDEYVFGCLLDALCKNGSVKEAASLF-----EDMRVRFN-P 267
Query: 490 ALGHVITLCISLGW-----LDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTA 544
L H +L GW + +A +L ++ AG VY +LL Y +A + R+
Sbjct: 268 NLRHFTSLL--YGWCREGKIMEAKHVLVQIKEAGFEPDIVVYNNLLGGYAQAGKMRDAFD 325
Query: 545 LLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKG- 603
LL + + +A+ + L+QS + A+ +F EM+ S + + L+ G
Sbjct: 326 LLAEMKKVNCGPNAASFTILIQSFCKTEKMDEAMRIFTEMQGSGC-EADVVTYTTLISGF 384
Query: 604 CAQNHEAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFC------KKRLMQDAEKALKRMR 657
C + L +++G HD + + + C KK +++ + ++ MR
Sbjct: 385 CKWGNTDKAYEILDDMIQKG-------HDPSQ-LSYLCIMMAHEKKEELEECMELIEEMR 436
Query: 658 SLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVR 717
+G +P+ +++M+ + G E LWGEM+ A + D +L +++ F+
Sbjct: 437 KIGCVPDLNIYNTMIRLVCKL-GDLKEAVRLWGEMQ--AGGLNPGLDTYIL--MVHGFLS 491
Query: 718 GGFFARANEVVA-MMEEGKMFIDKY 741
G A + M+E G + +Y
Sbjct: 492 QGCLVEACDYFKEMVERGLLSAPQY 516
>gi|291622148|emb|CBJ23784.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
thaliana]
Length = 630
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/250 (21%), Positives = 105/250 (42%), Gaps = 7/250 (2%)
Query: 478 EKENLQVSHDDAALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEAN 537
+ +NL + H+ +I L A +L +M G + +SLL Y +
Sbjct: 106 QMQNLGMPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSK 165
Query: 538 RPREVTALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEF 597
R E AL+ G Q + + L+ + A+ L M +K + +
Sbjct: 166 RISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAVALIDRMV-AKGCQPDLVTY 224
Query: 598 EMLVKGCAQNHEAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMR 657
++V G + + L LL ++++G +++ GV + +I CK + M DA K M
Sbjct: 225 GVVVNGLCKRGDTDLAFILLNKMEQG-KLEPGVLIYTTIIDGLCKNKHMDDALNLFKEME 283
Query: 658 SLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVR 717
+ G PN T+ S+++ G++++ + L +M +N D +++ FV+
Sbjct: 284 TKGIRPNVVTYSSLISCLCNY-GRWSDASRLLSDM----IERKINPDVFTFSALIDAFVK 338
Query: 718 GGFFARANEV 727
G A ++
Sbjct: 339 EGKLVEAEKL 348
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 68/296 (22%), Positives = 122/296 (41%), Gaps = 52/296 (17%)
Query: 447 LQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEK---ENLQVSHDDAALGH---VITLCIS 500
+ P + L+ AF++ GK L++AEK E ++ S D + + + + C+
Sbjct: 322 INPDVFTFSALIDAFVKEGK-------LVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMH 374
Query: 501 LGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASC 560
LD+A + + M Y++L+K + +A R E L R+ G+ +
Sbjct: 375 -DRLDEAKQMFEFMVSKHCFPDVVSYSTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVT 433
Query: 561 YEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQN---HEAGLMAKLL 617
Y L+Q D A +FKEM +P + L+ G +N +A ++ + L
Sbjct: 434 YTTLIQGLFQAGDCDMAQEIFKEMVSDGVP-PNIMTYNTLLDGLCKNGKLEKAMVVFEYL 492
Query: 618 Q----------------------EVKEGQRIDCG---------VHDWNNVIHFFCKKRLM 646
Q +V++G + C V +N +I FC+K
Sbjct: 493 QRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSK 552
Query: 647 QDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEMKS--FASSTS 700
++A+ K M+ G LPN+ +++++ G + EL EM+S FA S
Sbjct: 553 EEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREAS-AELIKEMRSCGFAGDAS 607
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 55/243 (22%), Positives = 98/243 (40%), Gaps = 7/243 (2%)
Query: 504 LDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEA 563
+D A +L EM G+R + Y+SL+ R + + LL D I D + A
Sbjct: 272 MDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSA 331
Query: 564 LLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEG 623
L+ + + + A L+ EM + I S + L+ G H+ AK + E
Sbjct: 332 LIDAFVKEGKLVEAEKLYDEMVKRSIDPS-IVTYSSLINGFCM-HDRLDEAKQMFEFMVS 389
Query: 624 QRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYT 683
+ V ++ +I FCK + + + + + M G + N T+ +++ G G
Sbjct: 390 KHCFPDVVSYSTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIQGLFQ-AGDCD 448
Query: 684 EVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFIDKYKY 743
E++ EM S ++ LLD + + G +A V ++ KM Y Y
Sbjct: 449 MAQEIFKEMVSDGVPPNIMTYNTLLDGL----CKNGKLEKAMVVFEYLQRSKMEPTIYTY 504
Query: 744 RTL 746
+
Sbjct: 505 NIM 507
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 56/282 (19%), Positives = 106/282 (37%), Gaps = 40/282 (14%)
Query: 447 LQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQ 506
++P Y L+ G+ + + L ++ +++ D +I + G L +
Sbjct: 287 IRPNVVTYSSLISCLCNYGRWSDASRLL--SDMIERKINPDVFTFSALIDAFVKEGKLVE 344
Query: 507 AHDLLDEMHLAGVRASSSVYAS-----------------------------------LLK 531
A L DEM + S Y+S L+K
Sbjct: 345 AEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVSYSTLIK 404
Query: 532 AYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPR 591
+ +A R E L R+ G+ + Y L+Q D A +FKEM +P
Sbjct: 405 GFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVP- 463
Query: 592 SGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEK 651
+ L+ G +N + A ++ E + +++ ++ +N +I CK ++D
Sbjct: 464 PNIMTYNTLLDGLCKNGKLE-KAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWD 522
Query: 652 ALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEMK 693
+ G P+ +++M++G+ G K E L+ EMK
Sbjct: 523 LFCNLSLKGVKPDVVAYNTMISGFCRKGSK-EEADALFKEMK 563
>gi|297743996|emb|CBI36966.3| unnamed protein product [Vitis vinifera]
Length = 730
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 97/228 (42%), Gaps = 8/228 (3%)
Query: 454 YIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQAHDLLDE 513
Y L+ A + G+ F I +E + + VI G LD+A +L +E
Sbjct: 215 YNTLLDAVCKGGQMD--LAFQIMSEMPRKHIMPNVVTYSTVIDGYAKAGRLDEALNLFNE 272
Query: 514 MHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQKD 573
M A + Y +LL Y + R E + ++ S+GI+ DA Y ALL Q
Sbjct: 273 MKFASIGLDRVSYNTLLSIYAKLGRFEEALNVCKEMESSGIKKDAVTYNALLGGYGKQGK 332
Query: 574 TPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQR--IDCGVH 631
+F+EMK +I + L+ ++ GL + ++ +E ++ + V
Sbjct: 333 YEEVKRVFEEMKAERI-FPNLLTYSTLIDVYSK---GGLYQEAMEVFREFKKAGLKADVV 388
Query: 632 DWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIG 679
++ +I CK L++ A L M G PN T++S++ + G
Sbjct: 389 LYSALIDALCKNGLVESAVSFLDEMTKEGIRPNVVTYNSIIDAFGRSG 436
Score = 44.7 bits (104), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 56/127 (44%), Gaps = 5/127 (3%)
Query: 626 IDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEV 685
I+ + +N ++ CK M A + + M +PN T+ +++ GYA G+ E
Sbjct: 208 IEQDIFTYNTLLDAVCKGGQMDLAFQIMSEMPRKHIMPNVVTYSTVIDGYAK-AGRLDEA 266
Query: 686 TELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFIDKYKYRT 745
L+ EMK FA S+ D +++L + + G F A V ME + D Y
Sbjct: 267 LNLFNEMK-FA---SIGLDRVSYNTLLSIYAKLGRFEEALNVCKEMESSGIKKDAVTYNA 322
Query: 746 LFLKYHK 752
L Y K
Sbjct: 323 LLGGYGK 329
Score = 42.0 bits (97), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 51/222 (22%), Positives = 90/222 (40%), Gaps = 14/222 (6%)
Query: 531 KAYIEANRPREV---TALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKES 587
K ++ NR E+ L + GI+ D Y LL + A + EM
Sbjct: 182 KGGVDFNRAAEIFDEMNLFSEMLYRGIEQDIFTYNTLLDAVCKGGQMDLAFQIMSEMPRK 241
Query: 588 KIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRIDCGVH--DWNNVIHFFCKKRL 645
I + ++ G A+ AG + + L E + G+ +N ++ + K
Sbjct: 242 HI-MPNVVTYSTVIDGYAK---AGRLDEALNLFNEMKFASIGLDRVSYNTLLSIYAKLGR 297
Query: 646 MQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEMKSFASSTSMNFDE 705
++A K M S G +A T+++++ GY GKY EV ++ EMK+ ++
Sbjct: 298 FEEALNVCKEMESSGIKKDAVTYNALLGGYGK-QGKYEEVKRVFEEMKAERIFPNLLTYS 356
Query: 706 ELLDSVLYTFVRGGFFARANEVVAMMEEGKMFIDKYKYRTLF 747
L+D + +GG + A EV ++ + D Y L
Sbjct: 357 TLID----VYSKGGLYQEAMEVFREFKKAGLKADVVLYSALI 394
>gi|410110149|gb|AFV61154.1| pentatricopeptide repeat-containing protein 123, partial
[Xeroaloysia ovatifolia]
Length = 431
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/195 (23%), Positives = 90/195 (46%), Gaps = 22/195 (11%)
Query: 505 DQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEAL 564
++A++L+ EM G+ +S Y++++ + +A + L + RS+G+++D + L
Sbjct: 239 EKANNLIQEMQNRGIEPNSITYSTIISIWGKAGKLDRAAMLFQKLRSSGVEID----QVL 294
Query: 565 LQSKIVQKDTPG----ALHLFKEMKE-SKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQE 619
Q+ IV + G A L E+K IPR ++ G + EA + + Q
Sbjct: 295 YQTMIVAYEKAGLVAHAKRLLHELKSPDNIPRDTAIH---ILAGAGRIEEATYVFR--QA 349
Query: 620 VKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAI- 678
+ G+ D V + +IH F K + + + +MR LG+ P++ ++ Y +
Sbjct: 350 IDAGEVRDITV--FERMIHLFSKYKKYANVVEVFDKMRGLGYFPDSNVIALVLNAYGKLH 407
Query: 679 -----GGKYTEVTEL 688
G Y E+ E+
Sbjct: 408 EFDKANGVYMEMQEV 422
Score = 47.0 bits (110), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 68/314 (21%), Positives = 128/314 (40%), Gaps = 25/314 (7%)
Query: 447 LQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQ 506
L P Y L+ F + G +L K E++ +V D ++I L L +
Sbjct: 8 LSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQD--RVPGDLVLYSNLIELSRKLCDYSK 65
Query: 507 AHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQ 566
A + + +G Y +++ + +A RE +L+ + R+AG+ + + Y LL
Sbjct: 66 AISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVMPNTASYTTLLT 125
Query: 567 SKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGL-MAKLLQEVKEGQR 625
+ K AL +F EM+E K ++ + L MAK ++ G R
Sbjct: 126 MYVENKKFLEALSVFSEMREIKCL------LDLTTCNIMIDVYGQLGMAKEADKLFWGMR 179
Query: 626 ---IDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKY 682
I+ V +N ++ + L +A + M+ + N T++SM+ Y GK
Sbjct: 180 KMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIVQNVVTYNSMMMIY----GKT 235
Query: 683 TE---VTELWGEMKSFA-SSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFI 738
E L EM++ S+ + +++ + + G RA + + + I
Sbjct: 236 LEHEKANNLIQEMQNRGIEPNSITY-----STIISIWGKAGKLDRAAMLFQKLRSSGVEI 290
Query: 739 DKYKYRTLFLKYHK 752
D+ Y+T+ + Y K
Sbjct: 291 DQVLYQTMIVAYEK 304
>gi|199601721|dbj|BAG70980.1| pentatricopeptide (PPR) repeat-containing protein [Musa balbisiana]
Length = 788
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 97/223 (43%), Gaps = 8/223 (3%)
Query: 472 HFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQAH-DLLDEMHLAGVRASSSVYASLL 530
HF EK + HD +I L L+ A LLD+M V S ++ASL+
Sbjct: 163 HFFRWVEKTGFR--HDPDTYREIILLLARASMLNHARCILLDDMPDRLVPPSEDMFASLI 220
Query: 531 KAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEM-KESKI 589
+ Y A P+E + R G+ Y+A+ ++ + A LF M E +
Sbjct: 221 EGYGCARIPQEAVKIFRRLPELGVTRTVRSYDAVFKAILRSGRVAMARRLFNAMIAEGVL 280
Query: 590 PRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDA 649
P + L+ G + + + ++KE + I + +N +++ + + + M DA
Sbjct: 281 PV--LSTYNTLLWGFCLSIKMETAQRFFADMKE-RGIAPDLVTYNTILNGWARAKKMDDA 337
Query: 650 EKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEM 692
EK M + G PN+ +++ M+ GY G+ + ++ EM
Sbjct: 338 EKVFAEMTAAGFAPNSISYNIMIKGYVC-SGRVDDGLRMFSEM 379
>gi|449438480|ref|XP_004137016.1| PREDICTED: pentatricopeptide repeat-containing protein At1g03560,
mitochondrial-like [Cucumis sativus]
Length = 651
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 63/305 (20%), Positives = 130/305 (42%), Gaps = 12/305 (3%)
Query: 443 EHGILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLG 502
+ G+L TE L+K+F G +EL ++ + KEN + ++ ++
Sbjct: 176 DRGLLM-TESAANSLIKSFGNLGLVEELL-WVWRRMKEN-GIDPSLYTYNFLVNGLVNSM 232
Query: 503 WLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYE 562
+++ A + + M + + Y ++K Y +A + ++ RD ++ D Y
Sbjct: 233 FIESAEKVFEVMDGGKIVPDTVTYNIMIKGYCKAGKLQKAMEKFRDMEMKNVKPDKITYM 292
Query: 563 ALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKG-CAQNHEAGLMAKLLQEVK 621
L+Q+ ++D L L+ EM+E + H + +++ G C Q A +
Sbjct: 293 TLIQACYSERDFDTCLSLYLEMEERGLEIPPHS-YSLVIGGLCKQRKCMEAYAVFETMNQ 351
Query: 622 EGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGK 681
+G R + + + +I + K M++A + +RM++ G P+A T+ +V G G+
Sbjct: 352 KGCRANVAI--YTALIDSYSKNGSMEEAMRLFERMKNEGFEPDAVTYSVLVNGLCK-SGR 408
Query: 682 YTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFIDKY 741
+ EL+ ++ + + F L+D + + G A + M E D Y
Sbjct: 409 LDDGMELFDFCRNKGVAINAMFYASLIDGL----GKAGRIEDAENLFEEMSEKGCARDSY 464
Query: 742 KYRTL 746
Y +
Sbjct: 465 CYNAI 469
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 69/159 (43%), Gaps = 7/159 (4%)
Query: 453 IYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVIT--LCISLGWLDQAHDL 510
IY L+ ++ + G +E + + E + DA V+ LC S G LD +L
Sbjct: 360 IYTALIDSYSKNGSMEEAMRLFERMKNEGFE---PDAVTYSVLVNGLCKS-GRLDDGMEL 415
Query: 511 LDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIV 570
D GV ++ YASL+ +A R + L + G D+ CY A++ +
Sbjct: 416 FDFCRNKGVAINAMFYASLIDGLGKAGRIEDAENLFEEMSEKGCARDSYCYNAIIDALAK 475
Query: 571 QKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHE 609
AL LF M+E ++ + F +L+ G + H+
Sbjct: 476 HGKIDQALALFGRMEEEGCDQTVYT-FTILIDGLFKEHK 513
>gi|302794911|ref|XP_002979219.1| hypothetical protein SELMODRAFT_110655 [Selaginella moellendorffii]
gi|300152987|gb|EFJ19627.1| hypothetical protein SELMODRAFT_110655 [Selaginella moellendorffii]
Length = 1143
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 61/275 (22%), Positives = 111/275 (40%), Gaps = 49/275 (17%)
Query: 457 LVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQAHDLLDEMHL 516
L+ A+ +AG+ + LT + + N S AL I+ L++A L+++M
Sbjct: 768 LIAAYGKAGRYEVLTKLKPELPRNNFVYSSMVGAL-------INCNQLEKAAGLVEKMRQ 820
Query: 517 AGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQKDTPG 576
G++ S + + LL AY +A + AL+ AR GI LD Y ++++ +
Sbjct: 821 IGLKCDSVLVSILLNAYSKAGLVEDADALIHMARGDGIPLDIVAYNTIIKADLRAGRLKK 880
Query: 577 ALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRIDCGVHDWNNV 636
A+ + + GL L ++ +
Sbjct: 881 AIDTYSSLTN-----------------------LGLRPSL--------------QTYDTM 903
Query: 637 IHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEMKSFA 696
I F K +DAEK K ++S G P+ + + M+ YA G Y +L+ MK
Sbjct: 904 ISVFAKSGRTRDAEKMFKDLKSAGFQPDEKVYSQMMNCYAK-SGMYEHAADLFEAMK--- 959
Query: 697 SSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMM 731
+ E ++++ + R G FA+A +++ M
Sbjct: 960 -LRGLRPHEVSYNNLIDAYARAGQFAKAEQLLVEM 993
Score = 49.7 bits (117), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 92/425 (21%), Positives = 172/425 (40%), Gaps = 40/425 (9%)
Query: 272 AEQLLDIMPRIGVKADSNLLIIMAHIYERNGRREELRKL-----QRHIDEAVNLSDIQFR 326
AE++L M G D I+ + Y R EE L + EA +S I
Sbjct: 644 AEEVLRQMREKGFTPDHITQGILINAYGEANRIEEAAGLLEASAKEDESEAAAISRI--- 700
Query: 327 QFYNCLLSCHLKFGDLNSASKMVLEMLQRAKEARNSLAAAMLPFNAVGVNNRTPSE--QN 384
Y CL KF + A+ ++ +L+ +S A L N + P+E +
Sbjct: 701 --YLCL-----KFRLFDKATLLLHRVLESF--TLDSAAYNQLTINFLKAGQVPPAEMLHS 751
Query: 385 VNCTNSVDLENSGIIENHILSYEDFTKDRKFVALEAEVKR---VLQTLLGMLQKQVELIT 441
D+E+S + + I +Y + L+ E+ R V +++G L +L
Sbjct: 752 RMQDKGFDVEDS-TLGHLIAAYGKAGRYEVLTKLKPELPRNNFVYSSMVGALINCNQL-E 809
Query: 442 TEHGILQPTEKIYIK--------LVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGH 493
G+++ +I +K L+ A+ +AG ++ + A + + + D A
Sbjct: 810 KAAGLVEKMRQIGLKCDSVLVSILLNAYSKAGLVEDADALIHMARGDGIPL--DIVAYNT 867
Query: 494 VITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAG 553
+I + G L +A D + G+R S Y +++ + ++ R R+ + +D +SAG
Sbjct: 868 IIKADLRAGRLKKAIDTYSSLTNLGLRPSLQTYDTMISVFAKSGRTRDAEKMFKDLKSAG 927
Query: 554 IQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLM 613
Q D Y ++ A LF+ MK + R + L+ A+ AG
Sbjct: 928 FQPDEKVYSQMMNCYAKSGMYEHAADLFEAMKLRGL-RPHEVSYNNLIDAYAR---AGQF 983
Query: 614 AKLLQEVKEGQRIDCGVHDWNN--VIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSM 671
AK Q + E + C +I + + +AE AL+RM++ P + ++ +
Sbjct: 984 AKAEQLLVEMAKAGCPPSSVTFLLLISAYAHRGKCNEAENALERMQTAAIRPTVRHYNEV 1043
Query: 672 VTGYA 676
+ ++
Sbjct: 1044 MLAFS 1048
Score = 48.1 bits (113), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 42/198 (21%), Positives = 81/198 (40%), Gaps = 19/198 (9%)
Query: 487 DDAALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALL 546
D+ VI++ G D+A L EM+ + ++ + ++A + E ++
Sbjct: 485 DEVVYTSVISIYGKAGLYDEAEKLFQEMNELRLLVDVKTFSVMANVRLKAGKYNEAVQVM 544
Query: 547 RDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPR--------SGHQEFE 598
+ + G+ LD + ++ LL + + A FK + ES I S + EF+
Sbjct: 545 EELLAKGLNLDDTAWKTLLHCYVKAGNVERATKTFKTLVESGIADLMAYNDMLSLYAEFD 604
Query: 599 MLVKGCAQNHEAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRS 658
ML AKLL + + I + ++ +C ++ AE+ L++MR
Sbjct: 605 MLED-----------AKLLFQQLKSSSIQPDQVWFGTMVKLYCNANMVAAAEEVLRQMRE 653
Query: 659 LGHLPNAQTFHSMVTGYA 676
G P+ T ++ Y
Sbjct: 654 KGFTPDHITQGILINAYG 671
Score = 42.7 bits (99), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 81/369 (21%), Positives = 143/369 (38%), Gaps = 41/369 (11%)
Query: 251 PNTNTFNIALAGCLL-FETTRKAEQLLDIMPRIGVKADSNLLIIMAHIYERNGRREELRK 309
P N ++ G L+ KA L++ M +IG+K DS L+ I+ + Y + G E+
Sbjct: 789 PRNNFVYSSMVGALINCNQLEKAAGLVEKMRQIGLKCDSVLVSILLNAYSKAGLVEDADA 848
Query: 310 L-QRHIDEAVNLSDIQFRQFYNCLLSCHLKFGDLNSASKMVLEMLQRAKEARNSLAAAML 368
L + + L + YN ++ L+ G L++A + +SL L
Sbjct: 849 LIHMARGDGIPLDIVA----YNTIIKADLRAG-----------RLKKAIDTYSSLTNLGL 893
Query: 369 PFNAVGVNNRTPSEQNVNCTNSVDLENSGIIENHILSYEDFTKDRKFVALEAEVKRVLQT 428
PS Q + SV SG + E KD K + + K Q
Sbjct: 894 ----------RPSLQTYDTMISV-FAKSGRTRDA----EKMFKDLKSAGFQPDEKVYSQM 938
Query: 429 L-----LGMLQKQVELI-TTEHGILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENL 482
+ GM + +L + L+P E Y L+ A+ AG+ + L++ K
Sbjct: 939 MNCYAKSGMYEHAADLFEAMKLRGLRPHEVSYNNLIDAYARAGQFAKAEQLLVEMAKAGC 998
Query: 483 QVSHDDAALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREV 542
S L +I+ G ++A + L+ M A +R + Y ++ A+ A P +
Sbjct: 999 PPSSVTFLL--LISAYAHRGKCNEAENALERMQTAAIRPTVRHYNEVMLAFSRARLPSQA 1056
Query: 543 TALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEF-EMLV 601
+GIQ D +++ + L L+K+ + + S +E L
Sbjct: 1057 MESYLKMERSGIQPDVVSSRTMIRILLEGSMFEEGLSLYKKTEAKLVSDSLSREMVAKLY 1116
Query: 602 KGCAQNHEA 610
+G ++ EA
Sbjct: 1117 QGAGKHFEA 1125
>gi|110738150|dbj|BAF01006.1| hypothetical protein [Arabidopsis thaliana]
Length = 642
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 61/306 (19%), Positives = 128/306 (41%), Gaps = 24/306 (7%)
Query: 457 LVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQAHDLLDEMHL 516
L+K+F + G +EL K ++ ++ + ++ +S ++D A + + M
Sbjct: 175 LIKSFGKLGMVEELLWVWRKMKENGIEPTL--YTYNFLMNGLVSAMFVDSAERVFEVMES 232
Query: 517 AGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQKDTPG 576
++ Y +++K Y +A + ++ LRD + G + D Y ++Q+ D
Sbjct: 233 GRIKPDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQACYADSDFGS 292
Query: 577 ALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQE-VKEGQRIDCGVHDWNN 635
+ L++EM E I H F +++ G + + + + +++G + + + +
Sbjct: 293 CVALYQEMDEKGIQVPPHA-FSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAI--YTV 349
Query: 636 VIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEMKSF 695
+I + K ++DA + L RM G P+ T+ +V G G+ E + +
Sbjct: 350 LIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCK-NGRVEEALDYF------ 402
Query: 696 ASSTSMNFDEELLDSVLYTFV-----RGGFFARANEVVAMMEEGKMFIDKYKYRTL---F 747
+ FD ++S+ Y+ + + G A + M E D Y Y L F
Sbjct: 403 ---HTCRFDGLAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAF 459
Query: 748 LKYHKT 753
K+ K
Sbjct: 460 TKHRKV 465
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/161 (22%), Positives = 66/161 (40%), Gaps = 2/161 (1%)
Query: 448 QPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQA 507
+P IY L+ + ++G ++ L + E + D V+ G +++A
Sbjct: 341 KPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFK--PDVVTYSVVVNGLCKNGRVEEA 398
Query: 508 HDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQS 567
D G+ +S Y+SL+ +A R E L + G D+ CY AL+ +
Sbjct: 399 LDYFHTCRFDGLAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDA 458
Query: 568 KIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNH 608
+ A+ LFK M+E + + +L+ G + H
Sbjct: 459 FTKHRKVDEAIALFKRMEEEEGCDQTVYTYTILLSGMFKEH 499
>gi|148906470|gb|ABR16388.1| unknown [Picea sitchensis]
Length = 700
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 59/260 (22%), Positives = 110/260 (42%), Gaps = 16/260 (6%)
Query: 423 KRVLQTLLGMLQKQVELITTEHGILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENL 482
+++++ G+LQK E+G +P Y L++ + +E + E+ +
Sbjct: 371 RKMIEQAYGVLQKM-----RENGC-EPNIYTYNALIQGLCAVRRPEEALELVTLMEQGGV 424
Query: 483 QVS-HDDAALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPRE 541
+ + L H LC L LD+A ++ +E G++ + Y +LL Y +R E
Sbjct: 425 PPNIYTYTILTH--GLC-KLRRLDRAKEMFNEALARGLKPNRVTYNTLLNGYCRGSRLIE 481
Query: 542 VTALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLV 601
+L++ D Y L+Q + P AL + EM E+K +L
Sbjct: 482 AMDILKEMHQNDCTPDHVTYTTLIQGLVQGNQLPDALRMHDEM-ENKGYDVNFDTLNILA 540
Query: 602 KGCAQ--NHEAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSL 659
+G A+ NH+ A + + + D+ IH M++A+ L M +
Sbjct: 541 RGLARVGNHKD---ASIFYRRMKDRGFAYSASDYYLAIHCLSTAGEMEEAQALLYEMINK 597
Query: 660 GHLPNAQTFHSMVTGYAAIG 679
G+ PN T+++M+ G+ G
Sbjct: 598 GYSPNLTTYNTMIKGFCRQG 617
>gi|15221674|ref|NP_176496.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169918|sp|Q9CAN5.1|PPR98_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g63080, mitochondrial; Flags: Precursor
gi|12323262|gb|AAG51614.1|AC010795_18 unknown protein; 41955-40111 [Arabidopsis thaliana]
gi|332195930|gb|AEE34051.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 614
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 65/294 (22%), Positives = 119/294 (40%), Gaps = 18/294 (6%)
Query: 448 QPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQA 507
QP + LV + K E + + + Q D G VI G D A
Sbjct: 167 QPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQ--PDLVTYGAVINGLCKRGEPDLA 224
Query: 508 HDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQS 567
+LL++M + A +Y++++ + + + L + + GI+ D Y +L+
Sbjct: 225 LNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISC 284
Query: 568 KIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRID 627
A L +M E KI F L+ A+ + KL E+ + + ID
Sbjct: 285 LCNYGRWSDASRLLSDMLERKI-NPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQ-RSID 342
Query: 628 CGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTE 687
+ +N++I+ FC + +A++ M S LP+ T+++++ G+ K + E
Sbjct: 343 PNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCK-AKKVVDGME 401
Query: 688 LWGEM--KSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFID 739
L+ +M + +T V YT + GFF ++ A M +M D
Sbjct: 402 LFRDMSRRGLVGNT-----------VTYTTLIHGFFQASDCDNAQMVFKQMVSD 444
Score = 55.8 bits (133), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 87/413 (21%), Positives = 164/413 (39%), Gaps = 99/413 (23%)
Query: 312 RHIDEAVNL------SDIQFRQF-YNCLLSCHLKFGDLNSASKMVLEMLQRAKEARNSLA 364
RH+D+A+NL I+ F Y+ L+SC +G + AS+++ +ML+R +
Sbjct: 254 RHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLER------KIN 307
Query: 365 AAMLPFNAVGVNNRTPSEQNVNCTNSVDLENSGIIENHILSYEDFTKDRKFVALEAEVKR 424
++ FN++ + F K+ K + EAE
Sbjct: 308 PNVVTFNSL--------------------------------IDAFAKEGKLI--EAE--- 330
Query: 425 VLQTLLGMLQKQVELITTEHGILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQV 484
+ M+Q+ ++ P Y L+ F + E L V
Sbjct: 331 --KLFDEMIQRSID----------PNIVTYNSLINGFCMHDRLDEAQQIF------TLMV 372
Query: 485 SHDDAALGHVITLCISLGWLDQAHDLLDEMHL------AGVRASSSVYASLLKAYIEANR 538
S D L V+T + +A ++D M L G+ ++ Y +L+ + +A+
Sbjct: 373 SKD--CLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASD 430
Query: 539 PREVTALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFE 598
+ + S G+ + Y LL A+ +F+ +++SK+ + +
Sbjct: 431 CDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYT-YN 489
Query: 599 MLVKGCAQNHEAGLMAKLLQEVKEGQRIDCG---------VHDWNNVIHFFCKKRLMQDA 649
++ +G + AG +V++G + C V +N +I FCKK L ++A
Sbjct: 490 IMSEGMCK---AG-------KVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEA 539
Query: 650 EKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEMKS--FASSTS 700
+M+ G LP++ T+++++ + G K EL EM+S FA S
Sbjct: 540 YTLFIKMKEDGPLPDSGTYNTLIRAHLRDGDKAAS-AELIKEMRSCRFAGDAS 591
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 87/213 (40%), Gaps = 3/213 (1%)
Query: 480 ENLQVSHDDAALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRP 539
E L VSH+ +I L A +L +M G S SLL + NR
Sbjct: 92 EILGVSHNLYTYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRI 151
Query: 540 REVTALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEM 599
E AL+ G Q D + L+ A+ L + M K + +
Sbjct: 152 SEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMV-VKGCQPDLVTYGA 210
Query: 600 LVKGCAQNHEAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSL 659
++ G + E L LL ++++G +I+ V ++ VI CK R + DA M +
Sbjct: 211 VINGLCKRGEPDLALNLLNKMEKG-KIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNK 269
Query: 660 GHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEM 692
G P+ T+ S+++ G++++ + L +M
Sbjct: 270 GIRPDVFTYSSLISCLCNY-GRWSDASRLLSDM 301
>gi|15224671|ref|NP_180698.1| genomes uncoupled 1 protein [Arabidopsis thaliana]
gi|75206083|sp|Q9SIC9.1|PP178_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g31400, chloroplastic; Flags: Precursor
gi|4589961|gb|AAD26479.1| unknown protein [Arabidopsis thaliana]
gi|330253448|gb|AEC08542.1| genomes uncoupled 1 protein [Arabidopsis thaliana]
Length = 918
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 76/177 (42%), Gaps = 6/177 (3%)
Query: 502 GWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCY 561
G D+A +L EM G+ Y +LL Y + R E +LR+ S GI+ D Y
Sbjct: 423 GRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTY 482
Query: 562 EALLQSKIVQKDTPGALHLFKEMK-ESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEV 620
ALL Q +F EMK E +P + L+ G ++ ++ +E
Sbjct: 483 NALLGGYGKQGKYDEVKKVFTEMKREHVLPN--LLTYSTLIDGYSKGGLYKEAMEIFREF 540
Query: 621 KE-GQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYA 676
K G R D V ++ +I CK L+ A + M G PN T++S++ +
Sbjct: 541 KSAGLRAD--VVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDAFG 595
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 54/298 (18%), Positives = 111/298 (37%), Gaps = 42/298 (14%)
Query: 478 EKENLQVSHDDAALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEAN 537
E N ++ D + ++ G +D A ++L +M + + + Y++++ + +A
Sbjct: 364 EMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAG 423
Query: 538 RPREVTALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEF 597
R E L + R GI LD Y LL + AL + +EM I +
Sbjct: 424 RFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKD----- 478
Query: 598 EMLVKGCAQNHEAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMR 657
V +N ++ + K+ + +K M+
Sbjct: 479 --------------------------------VVTYNALLGGYGKQGKYDEVKKVFTEMK 506
Query: 658 SLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVR 717
LPN T+ +++ GY+ GG Y E E++ E K S + D L +++ +
Sbjct: 507 REHVLPNLLTYSTLIDGYSK-GGLYKEAMEIFREFK----SAGLRADVVLYSALIDALCK 561
Query: 718 GGFFARANEVVAMMEEGKMFIDKYKYRTLFLKYHKTLYKGKTPKFQTEAQLKKREAAL 775
G A ++ M + + + Y ++ + ++ ++ + L +AL
Sbjct: 562 NGLVGSAVSLIDEMTKEGISPNVVTYNSIIDAFGRSATMDRSADYSNGGSLPFSSSAL 619
Score = 48.1 bits (113), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 43/201 (21%), Positives = 86/201 (42%), Gaps = 6/201 (2%)
Query: 447 LQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQ 506
+ P Y ++ F +AG+ E + E L ++ D + ++++ +G ++
Sbjct: 405 IMPNVVSYSTVIDGFAKAGRFDEALNLF--GEMRYLGIALDRVSYNTLLSIYTKVGRSEE 462
Query: 507 AHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQ 566
A D+L EM G++ Y +LL Y + + EV + + + + + Y L+
Sbjct: 463 ALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLID 522
Query: 567 SKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEV-KEGQR 625
A+ +F+E K + + R+ + L+ +N G L+ E+ KEG
Sbjct: 523 GYSKGGLYKEAMEIFREFKSAGL-RADVVLYSALIDALCKNGLVGSAVSLIDEMTKEG-- 579
Query: 626 IDCGVHDWNNVIHFFCKKRLM 646
I V +N++I F + M
Sbjct: 580 ISPNVVTYNSIIDAFGRSATM 600
Score = 45.1 bits (105), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 67/323 (20%), Positives = 129/323 (39%), Gaps = 32/323 (9%)
Query: 463 EAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQAHDLLDEMHLAGVRAS 522
E K F +K E+ + +A+ I+ G + A + + G +
Sbjct: 211 ECDKAVGFYEFAVKRERRKNEQGKLASAM---ISTLGRYGKVTIAKRIFETAFAGGYGNT 267
Query: 523 SSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQS--------KIVQKDT 574
+++L+ AY + E ++ + G++ + Y A++ + K V K
Sbjct: 268 VYAFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQVAK-- 325
Query: 575 PGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGL--MAKLLQEVKEGQRIDCGVHD 632
F EM+ + + + F L+ C++ GL A+ L + +RI+ V
Sbjct: 326 -----FFDEMQRNGV-QPDRITFNSLLAVCSR---GGLWEAARNLFDEMTNRRIEQDVFS 376
Query: 633 WNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEM 692
+N ++ CK M A + L +M +PN ++ +++ G+A G++ E L+GEM
Sbjct: 377 YNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAK-AGRFDEALNLFGEM 435
Query: 693 KSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFIDKYKYRTLFLKYHK 752
+ + D +++L + + G A +++ M + D Y L Y K
Sbjct: 436 RYLG----IALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGK 491
Query: 753 TLYKGKTPKFQTEAQLKKREAAL 775
+ K TE KRE L
Sbjct: 492 QGKYDEVKKVFTEM---KREHVL 511
>gi|357130032|ref|XP_003566662.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
distachyon]
Length = 859
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 61/251 (24%), Positives = 98/251 (39%), Gaps = 24/251 (9%)
Query: 502 GWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCY 561
G +D+A + EM GVR Y++L+ A+ R + S G++ + Y
Sbjct: 453 GMMDEAMLVFTEMQGQGVRPDVVTYSTLISAFCRMGRLADAMEKFSQMISIGLEPNTVVY 512
Query: 562 EALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKG-CAQNHEAGLMAKLLQEV 620
+L+ + D A L EM IPR F ++ C + +
Sbjct: 513 HSLIHGFCMHGDLVKAKELVSEMMSKGIPRPNIVFFSSIIHSLCNEGRVMDAHDVFNLVI 572
Query: 621 KEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGG 680
G R + +N++I +C M+ A L M S+G P+ T++++V+GY G
Sbjct: 573 HIGDRPT--IVTFNSLIDGYCLVGKMEKAFGVLDAMVSVGIEPDVVTYNTLVSGYCK-SG 629
Query: 681 KYTEVTELWGEM--KSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVA------MME 732
K + L+ EM K +T V Y+ V G F A M++
Sbjct: 630 KIDDGLILFREMLHKKVKPTT-----------VTYSIVLDGLFHAGRTSAAKKMFHEMID 678
Query: 733 EGKMF-IDKYK 742
G ID YK
Sbjct: 679 SGTAVDIDTYK 689
Score = 52.8 bits (125), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 48/244 (19%), Positives = 96/244 (39%), Gaps = 38/244 (15%)
Query: 449 PTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQAH 508
P Y ++K+ +++E + + KE + S D + VI G + +A
Sbjct: 225 PNAISYNTVIKSLCGDSRSQEALDMVQRMAKEGGRCSPDVVSFNTVIHGFFKQGEVSKAC 284
Query: 509 DLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSK 568
+L++EM GV Y S++ A +A + +LR G++ D Y A++
Sbjct: 285 NLINEMVQKGVEPDVVTYNSIVDALCKARAMDKAELVLRQMVDKGVEPDGLTYTAIIHGY 344
Query: 569 IVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRIDC 628
+ +F++M GL+
Sbjct: 345 SCSGHWKESAKMFRKMTSK-----------------------GLIP-------------- 367
Query: 629 GVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTEL 688
G+ +N+ + CK +DAE+ + M + GH+P+ ++ ++ GYA G++ ++ L
Sbjct: 368 GIVTFNSFMSSLCKHGRSKDAEEIFQYMTTKGHMPDLVSYSILLHGYAT-EGRFADMNNL 426
Query: 689 WGEM 692
+ M
Sbjct: 427 FHSM 430
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 80/181 (44%), Gaps = 6/181 (3%)
Query: 517 AGVRASSSVYASLLKAYIEANRPRE-VTALLRDARSAGIQLDASCYEALLQSKIVQKDTP 575
AG+R + + LK A R E V LL G +A Y +++S +
Sbjct: 185 AGLRTRTIEANTFLKCLCHAKRTDEAVDVLLHRMSDLGCVPNAISYNTVIKSLCGDSRSQ 244
Query: 576 GALHLFKEM-KESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQE-VKEGQRIDCGVHDW 633
AL + + M KE F ++ G + E L+ E V++G D V +
Sbjct: 245 EALDMVQRMAKEGGRCSPDVVSFNTVIHGFFKQGEVSKACNLINEMVQKGVEPD--VVTY 302
Query: 634 NNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEMK 693
N+++ CK R M AE L++M G P+ T+ +++ GY+ G + E +++ +M
Sbjct: 303 NSIVDALCKARAMDKAELVLRQMVDKGVEPDGLTYTAIIHGYSC-SGHWKESAKMFRKMT 361
Query: 694 S 694
S
Sbjct: 362 S 362
Score = 42.4 bits (98), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 36/169 (21%), Positives = 62/169 (36%), Gaps = 38/169 (22%)
Query: 526 YASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMK 585
Y+ LL Y R ++ L GI + C+ L+ + + A+ +F EM
Sbjct: 407 YSILLHGYATEGRFADMNNLFHSMADKGIVANCHCFNILISAHAKRGMMDEAMLVFTEM- 465
Query: 586 ESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRL 645
+GQ + V ++ +I FC+
Sbjct: 466 ------------------------------------QGQGVRPDVVTYSTLISAFCRMGR 489
Query: 646 MQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEMKS 694
+ DA + +M S+G PN +HS++ G+ + G + EL EM S
Sbjct: 490 LADAMEKFSQMISIGLEPNTVVYHSLIHGF-CMHGDLVKAKELVSEMMS 537
>gi|255571081|ref|XP_002526491.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223534166|gb|EEF35882.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 884
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 66/276 (23%), Positives = 111/276 (40%), Gaps = 18/276 (6%)
Query: 447 LQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQ 506
L P +Y V AG+ E FL ++ + S A VI G+ D
Sbjct: 449 LVPDCSLYDVSVAGLCWAGQLDEAMQFLEDMLEKGMPPSV--VAFNSVIAAYSRAGFEDN 506
Query: 507 AHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQ 566
AH M + G+ SSS +S+L + R +E LL G+ ++ + LL
Sbjct: 507 AHKAYKIMLMFGLVPSSSTCSSMLLGLSKKGRLQEARDLLYKMIDKGLPVNKVAFTVLLD 566
Query: 567 SKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRI 626
DT GA L+ EM+ I F + G ++ AGL+ + + E +
Sbjct: 567 GYFKVGDTAGAHSLWYEMEARGICPDA-IAFSAFIDGLSK---AGLVEEAYEAFSEMSKK 622
Query: 627 DCGVHD--WNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTE 684
++ +N++IH C + +A K + MR G LP+ T + ++ G+ G+
Sbjct: 623 GFVPNNFVYNSLIHGLCNCGKLHEALKLEREMRQKGLLPDIFTTNIIINGFCK-EGRMKS 681
Query: 685 VTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGF 720
+ + EM + D+V Y + GG+
Sbjct: 682 AFDAFAEMHHIGVTP---------DTVTYNTLIGGY 708
Score = 42.7 bits (99), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 81/430 (18%), Positives = 160/430 (37%), Gaps = 31/430 (7%)
Query: 247 IAMKPNTNTFNIALAGCLLFETTRKAEQLLDIMPRIGVKADSNLLIIMAHIYERNGRREE 306
+ + PN +N ++G +A L + M G+ D I+ + G+ +
Sbjct: 377 VGLSPNVAMYNTLMSGYFKARDVCQANMLYEEMRDKGIAPDGATFNILVAGNYKYGKEAD 436
Query: 307 LRKLQRHIDEAVNLSDIQFRQFYNCLLSCHLKFGDLNSASKMVLEMLQRAKEARNSLAAA 366
+L R + + D Y+ ++ G L+ A + + +ML++ + +
Sbjct: 437 SYELFRDWSLSSLVPDCSL---YDVSVAGLCWAGQLDEAMQFLEDMLEKG------MPPS 487
Query: 367 MLPFNAV-GVNNRTPSEQNVNCTNSVDLENSGIIENHILSYEDFTKDRKFVALEAEVKRV 425
++ FN+V +R E N + + L + + S + L K
Sbjct: 488 VVAFNSVIAAYSRAGFEDNAHKAYKIMLMFGLVPSSSTCSS---------MLLGLSKKGR 538
Query: 426 LQTLLGMLQKQVELITTEHGILQPTEKI-YIKLVKAFLEAGKTKELTHFLIKAEKENLQV 484
LQ +L K ++ G+ P K+ + L+ + + G T H L E E +
Sbjct: 539 LQEARDLLYKMID-----KGL--PVNKVAFTVLLDGYFKVGDTAG-AHSLWY-EMEARGI 589
Query: 485 SHDDAALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTA 544
D A I G +++A++ EM G ++ VY SL+ + E
Sbjct: 590 CPDAIAFSAFIDGLSKAGLVEEAYEAFSEMSKKGFVPNNFVYNSLIHGLCNCGKLHEALK 649
Query: 545 LLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGC 604
L R+ R G+ D ++ + A F EM + + L+ G
Sbjct: 650 LEREMRQKGLLPDIFTTNIIINGFCKEGRMKSAFDAFAEMHHIGV-TPDTVTYNTLIGGY 708
Query: 605 AQNHEAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPN 664
+ + + L ++ D + +N I FC + + A L + ++G +PN
Sbjct: 709 CKVLDMVSADEFLNKMY-ASGWDPDITTYNIRIQGFCSSQKISRAVTMLDELIAVGVVPN 767
Query: 665 AQTFHSMVTG 674
T+++M+
Sbjct: 768 TVTYNTMMNA 777
>gi|449479180|ref|XP_004155527.1| PREDICTED: pentatricopeptide repeat-containing protein At1g03560,
mitochondrial-like [Cucumis sativus]
Length = 653
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 63/305 (20%), Positives = 130/305 (42%), Gaps = 12/305 (3%)
Query: 443 EHGILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLG 502
+ G+L TE L+K+F G +EL ++ + KEN + ++ ++
Sbjct: 178 DRGLLM-TESAANSLIKSFGNLGLVEELL-WVWRRMKEN-GIDPSLYTYNFLVNGLVNSM 234
Query: 503 WLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYE 562
+++ A + + M + + Y ++K Y +A + ++ RD ++ D Y
Sbjct: 235 FIESAEKVFEVMDGGKIVPDTVTYNIMIKGYCKAGKLQKAMEKFRDMEMKNVKPDKITYM 294
Query: 563 ALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKG-CAQNHEAGLMAKLLQEVK 621
L+Q+ ++D L L+ EM+E + H + +++ G C Q A +
Sbjct: 295 TLIQACYSERDFDTCLSLYLEMEERGLEIPPHS-YSLVIGGLCKQRKCMEAYAVFETMNQ 353
Query: 622 EGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGK 681
+G R + + + +I + K M++A + +RM++ G P+A T+ +V G G+
Sbjct: 354 KGCRANVAI--YTALIDSYSKNGSMEEAMRLFERMKNEGFEPDAVTYSVLVNGLCK-SGR 410
Query: 682 YTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFIDKY 741
+ EL+ ++ + + F L+D + + G A + M E D Y
Sbjct: 411 LDDGMELFDFCRNKGVAINAMFYASLIDGL----GKAGRIEDAENLFEEMSEKGCARDSY 466
Query: 742 KYRTL 746
Y +
Sbjct: 467 CYNAI 471
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 69/159 (43%), Gaps = 7/159 (4%)
Query: 453 IYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVIT--LCISLGWLDQAHDL 510
IY L+ ++ + G +E + + E + DA V+ LC S G LD +L
Sbjct: 362 IYTALIDSYSKNGSMEEAMRLFERMKNEGFE---PDAVTYSVLVNGLCKS-GRLDDGMEL 417
Query: 511 LDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIV 570
D GV ++ YASL+ +A R + L + G D+ CY A++ +
Sbjct: 418 FDFCRNKGVAINAMFYASLIDGLGKAGRIEDAENLFEEMSEKGCARDSYCYNAIIDALAK 477
Query: 571 QKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHE 609
AL LF M+E ++ + F +L+ G + H+
Sbjct: 478 HGKIDQALALFGRMEEEGCDQTVYT-FTILIDGLFKEHK 515
>gi|302787647|ref|XP_002975593.1| hypothetical protein SELMODRAFT_103638 [Selaginella moellendorffii]
gi|300156594|gb|EFJ23222.1| hypothetical protein SELMODRAFT_103638 [Selaginella moellendorffii]
Length = 471
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 60/265 (22%), Positives = 110/265 (41%), Gaps = 41/265 (15%)
Query: 448 QPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQA 507
P + ++K+F + GK ++ + L + +N +S D +I G +D+A
Sbjct: 5 SPNRYTFRVVLKSFCKQGKLRD-GYKLFEQMLDN-GISPDGIEYNILIDGYAKKGRVDEA 62
Query: 508 HDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQS 567
+ L +EM G+ S Y SLL A+ + + +E L + G + D Y ++
Sbjct: 63 NRLYEEMVSVGLEPSIYTYNSLLNAFCKETKMKEAMELFKTMAEKGFEPDVVTYSTIISG 122
Query: 568 KIVQKDTPGALH-LFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRI 626
AL LF +M E +GC+ N A
Sbjct: 123 LCKTGKVTEALEMLFHKMIE---------------RGCSANTVA---------------- 151
Query: 627 DCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVT 686
+N +I+ CK ++ A K L+ M S G++P+ T++++++G + GK +E
Sbjct: 152 ------YNALINGLCKDENIERAYKLLEEMASKGYVPDNITYNTILSGLCRM-GKVSEAK 204
Query: 687 ELWGEMKSFASSTSMNFDEELLDSV 711
+ + M S S + LLD++
Sbjct: 205 QFFDSMPSRGYSPDVVAYNGLLDAL 229
Score = 40.4 bits (93), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 49/246 (19%), Positives = 89/246 (36%), Gaps = 41/246 (16%)
Query: 433 LQKQVELITT--EHGILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAA 490
+++ +EL T E G +P Y ++ + GK E L E S + A
Sbjct: 94 MKEAMELFKTMAEKG-FEPDVVTYSTIISGLCKTGKVTEALEMLFHKMIER-GCSANTVA 151
Query: 491 LGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDAR 550
+I +++A+ LL+EM G + Y ++L + E
Sbjct: 152 YNALINGLCKDENIERAYKLLEEMASKGYVPDNITYNTILSGLCRMGKVSEAKQFFDSMP 211
Query: 551 SAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEA 610
S G D Y LL + + T A+ LFK++
Sbjct: 212 SRGYSPDVVAYNGLLDALYKEGKTDEAMKLFKDV-------------------------- 245
Query: 611 GLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHS 670
+ +G D +N+++ +K M +AE+ K+M + G PN T+
Sbjct: 246 ---------IAKGYMPD--TVTYNSILLGLARKSNMDEAEEMFKKMVASGCAPNGATYSI 294
Query: 671 MVTGYA 676
+++G+
Sbjct: 295 VLSGHC 300
>gi|297839331|ref|XP_002887547.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297333388|gb|EFH63806.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 763
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 76/178 (42%), Gaps = 5/178 (2%)
Query: 504 LDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEA 563
++ A ++LD M GV Y SLL + ++ +V + G + +
Sbjct: 477 MENALEILDVMMDNGVDPDVYTYNSLLNGLCKTSKYEDVMETYKTMVEKGCAPNLFTFNI 536
Query: 564 LLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEG 623
LL+S AL L +EMK + F L+ G +N + L ++++E
Sbjct: 537 LLESLCRYHKLDKALGLLEEMKNKSV-NPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEV 595
Query: 624 QRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRM--RSLGHLPNAQTFHSMVTGYAAIG 679
+ C +N +IH F +K + AEK + M R LG P+ T+ MV G+ G
Sbjct: 596 YMVSCSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLG--PDGYTYRLMVDGFCKTG 651
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 54/297 (18%), Positives = 121/297 (40%), Gaps = 11/297 (3%)
Query: 451 EKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQAHDL 510
E +Y+ +K + GK +E + + + + + + + ++++ + G+ DQAH +
Sbjct: 76 EGVYVGAMKNYGRKGKVQEAVNVFERMDFYDCEPTV--FSYNAIMSILVDSGYFDQAHKV 133
Query: 511 LDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIV 570
M G+ + +K++ +RP LL + S G +++ Y ++
Sbjct: 134 YMRMRDRGITPDVYSFTIRMKSFCRTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYE 193
Query: 571 QKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEV-KEGQRIDCG 629
+ LF +M S + F L+ + + KLL +V K G +
Sbjct: 194 ENFKDEGYELFGKMLASGVSLC-LSTFNKLLHVLCKKGDVKECEKLLDKVIKRG--VLPN 250
Query: 630 VHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELW 689
+ +N I C+K + A + + R+ G P+ T++ ++ G K+ E
Sbjct: 251 LFTYNFFIQGLCQKGELDAAVRMVGRLIDQGPKPDVVTYNYLIYGLCK-NSKFQEAEVYL 309
Query: 690 GEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFIDKYKYRTL 746
G++ + + D ++++ + +GG A ++ D++ YR+L
Sbjct: 310 GKL----VNEGLEPDSFTYNTLIAGYCKGGMVQLAERILVNAVFNGFVPDEFTYRSL 362
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 71/160 (44%), Gaps = 2/160 (1%)
Query: 518 GVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQKDTPGA 577
G+ S Y +L+ Y + + +L +A G D Y +L+ + +T A
Sbjct: 316 GLEPDSFTYNTLIAGYCKGGMVQLAERILVNAVFNGFVPDEFTYRSLIDGLCHEGETNRA 375
Query: 578 LHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRIDCGVHDWNNVI 637
L LF E I + + L+KG + A+L E+ E I V +N ++
Sbjct: 376 LALFNEALGKGI-KPNVILYNTLIKGLSNQGLILEAAQLASEMSEKGLIP-EVQTFNILV 433
Query: 638 HFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAA 677
+ CK + DA+ +K M S G+ P+ TF+ ++ GY+
Sbjct: 434 NGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYST 473
>gi|357454999|ref|XP_003597780.1| Beta-D-galactosidase [Medicago truncatula]
gi|357455013|ref|XP_003597787.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355486828|gb|AES68031.1| Beta-D-galactosidase [Medicago truncatula]
gi|355486835|gb|AES68038.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 639
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 59/247 (23%), Positives = 108/247 (43%), Gaps = 17/247 (6%)
Query: 506 QAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALL 565
+A L+ M GV SS Y+ L+ + + NR + LL + G + Y +L+
Sbjct: 390 EASSWLERMKKDGVVPSSFTYSILIDGFCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLI 449
Query: 566 QSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVK---GCAQNHEAGLMAKLLQEVKE 622
S K A LF+E+KE+ S + + +++K C + +EA L E+K
Sbjct: 450 NSLGKAKRYEAANELFQELKEN-CGSSSVRVYAVMIKHFGKCGRFNEA---MGLFNEMK- 504
Query: 623 GQRIDC--GVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGG 680
++ C V+ +N +I + +M +A + M G P+ + + ++ G A GG
Sbjct: 505 --KLGCIPDVYAYNALITGMVRADMMDEAFSLFRTMEENGCNPDINSHNIILNGLARTGG 562
Query: 681 KYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFIDK 740
E++ +MK S+++ D ++VL R G F A +++ M D
Sbjct: 563 P-KRAMEMFAKMK----SSTIKPDAVSYNTVLGCLSRAGLFEEATKLMKEMNSKGFEYDL 617
Query: 741 YKYRTLF 747
Y ++
Sbjct: 618 ITYSSIL 624
Score = 46.6 bits (109), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 43/184 (23%), Positives = 85/184 (46%), Gaps = 11/184 (5%)
Query: 494 VITLCISLGWLDQAHDLLDEMHLAG-VRASSSVYASLLKAYIEANRPREVTALLRDARSA 552
VI + + G ++ H+L +EM G + Y++L+ A+ + NR L + +
Sbjct: 201 VILMLMQEGHHEKVHELYNEMCSEGHCFPDTVTYSALISAFGKLNRDDSAVRLFDEMKEN 260
Query: 553 GIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEA-- 610
G+Q A Y L+ AL+L EM+ + + + E L++G ++
Sbjct: 261 GLQPTAKIYTTLMGIYFKLGKVEEALNLVHEMRMRRCVPTVYTYTE-LIRGLGKSGRVED 319
Query: 611 --GLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTF 668
G+ +L K+G + D V NN+I+ + +++A + + MR L PN T+
Sbjct: 320 AYGVYKNML---KDGCKPD--VVLMNNLINILGRSDRLKEAVELFEEMRLLNCTPNVVTY 374
Query: 669 HSMV 672
++++
Sbjct: 375 NTII 378
Score = 40.0 bits (92), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 36/174 (20%), Positives = 71/174 (40%), Gaps = 2/174 (1%)
Query: 505 DQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEAL 564
+ A++L E+ +S VYA ++K + + R E L + + G D Y AL
Sbjct: 459 EAANELFQELKENCGSSSVRVYAVMIKHFGKCGRFNEAMGLFNEMKKLGCIPDVYAYNAL 518
Query: 565 LQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQ 624
+ + A LF+ M+E+ +++ G A+ ++ ++K
Sbjct: 519 ITGMVRADMMDEAFSLFRTMEENGC-NPDINSHNIILNGLARTGGPKRAMEMFAKMKSST 577
Query: 625 RIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAI 678
I +N V+ + L ++A K +K M S G + T+ S++ +
Sbjct: 578 -IKPDAVSYNTVLGCLSRAGLFEEATKLMKEMNSKGFEYDLITYSSILEAVGKV 630
>gi|334183590|ref|NP_176479.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75179661|sp|Q9LQ16.1|PPR94_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g62910
gi|8493578|gb|AAF75801.1|AC011000_4 Contains a RepB PF|01051 protein domain and multiple PPR PF|01535
repeats [Arabidopsis thaliana]
gi|332195899|gb|AEE34020.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 632
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 101/499 (20%), Positives = 201/499 (40%), Gaps = 81/499 (16%)
Query: 247 IAMKPNTNTFNIALAGCLLFETTRKAEQLLDIMPRIGVKADSNLLIIMAH-IYERNGRRE 305
+ +P+ T + L G + A L+D M +G K D+ + H ++ N E
Sbjct: 147 LGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASE 206
Query: 306 ELRKLQRHIDEAVNLSDIQFRQFYNCLLSCHLKFGDLNSASKMVLEMLQRAKEARNSLAA 365
+ + + + + + N L K GD++ A L +L++ ++ + + A
Sbjct: 207 AVALVDQMVQRGCQPDLVTYGTVVNGLC----KRGDIDLA----LSLLKKMEKGK--IEA 256
Query: 366 AMLPFNAV--GVNNRTPSEQNVNCTNSVDLENSGIIENHILSYEDFTKDRKFVALEAEVK 423
++ +N + G+ + +N +D N GI + +Y ++
Sbjct: 257 DVVIYNTIIDGLCKYKHMDDALNLFTEMD--NKGI-RPDVFTYSSLISCLCNYGRWSDAS 313
Query: 424 RVLQTLLGMLQKQVELITTEHGILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEK---E 480
R+L M+++++ P + L+ AF++ GK L++AEK E
Sbjct: 314 RLLSD---MIERKI----------NPNVVTFSALIDAFVKEGK-------LVEAEKLYDE 353
Query: 481 NLQVSHDDAALGH---VITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEAN 537
++ S D + + C+ LD+A + + M + Y++L+K + +A
Sbjct: 354 MIKRSIDPDIFTYSSLINGFCMH-DRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAK 412
Query: 538 RPREVTALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEF 597
R E L R+ G+ + Y L+ +D A +FK+M + +
Sbjct: 413 RVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGV-HPNILTY 471
Query: 598 EMLVKGCAQNH---EAGLMAKLLQ----------------------EVKEGQRIDC---- 628
+L+ G +N +A ++ + LQ +V++G + C
Sbjct: 472 NILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSL 531
Query: 629 -----GVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYT 683
V +N +I FC+K ++A+ LK+M+ G LPN+ T+++++ G +
Sbjct: 532 KGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREA 591
Query: 684 EVTELWGEMKS--FASSTS 700
EL EM+S FA S
Sbjct: 592 S-AELIKEMRSCGFAGDAS 609
>gi|224093900|ref|XP_002310039.1| predicted protein [Populus trichocarpa]
gi|222852942|gb|EEE90489.1| predicted protein [Populus trichocarpa]
Length = 507
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 88/192 (45%), Gaps = 11/192 (5%)
Query: 556 LDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAK 615
D SC+ ALL++ +K A +++ +K+ P Q F +L+ G + EA L +
Sbjct: 178 FDTSCFNALLRTLCQEKSMSDARNVYHHLKKGFRP--NLQTFNILLSGWKSSEEAELFYE 235
Query: 616 LLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGY 675
++E+ G + D + +N++I FCK R ++ A + RMR LP+ T+ S++ G
Sbjct: 236 EMKEL--GVKPD--IVTYNSLIDVFCKGRELEKAYGVVARMREEDILPDVITYTSIIGGL 291
Query: 676 AAIGGKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGK 735
+ G+ + ++ EMK D ++V+ + A ++A ME
Sbjct: 292 GLV-GQPDKARDMLKEMKEHGCYP----DVAAYNAVIRNYCIAKRLDAAYSLMAEMESKG 346
Query: 736 MFIDKYKYRTLF 747
M + Y F
Sbjct: 347 MSPNATSYNLFF 358
Score = 40.0 bits (92), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 47/261 (18%), Positives = 96/261 (36%), Gaps = 40/261 (15%)
Query: 474 LIKAEKENLQVSHDDAALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAY 533
L E + L V D +I + L++A+ ++ M + Y S++
Sbjct: 232 LFYEEMKELGVKPDIVTYNSLIDVFCKGRELEKAYGVVARMREEDILPDVITYTSIIGGL 291
Query: 534 IEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSG 593
+P + +L++ + G D + Y A++++ + K A L EM ESK
Sbjct: 292 GLVGQPDKARDMLKEMKEHGCYPDVAAYNAVIRNYCIAKRLDAAYSLMAEM-ESKGMSPN 350
Query: 594 HQEFEMLVK---------------------GCAQNHEAGLMAKLLQEVKEGQRIDCGVHD 632
+ + + GC N ++ + L++ K ++++ +
Sbjct: 351 ATSYNLFFRVFSWSNDLRNSWDFYGRMMDAGCLPNTQSCMF--LIKLFKRHEKVEMALQL 408
Query: 633 WNNVIH---------------FFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAA 677
WN+++ C + +AEK +M GH P+ +F +
Sbjct: 409 WNDMVEKGFGSYILVSDVLLGMLCDMGKLVEAEKCFLQMVEKGHKPSNVSFRR-IKVLME 467
Query: 678 IGGKYTEVTELWGEMKSFASS 698
+ K+ + L +M F SS
Sbjct: 468 LANKHDAIRNLSEKMAIFGSS 488
>gi|15221081|ref|NP_172636.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75200496|sp|Q9SAA6.1|PPR34_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g11710, mitochondrial; Flags: Precursor
gi|4835786|gb|AAD30252.1|AC007296_13 F25C20.14 [Arabidopsis thaliana]
gi|22655109|gb|AAM98145.1| putative salt-inducible protein [Arabidopsis thaliana]
gi|30725498|gb|AAP37771.1| At1g11710 [Arabidopsis thaliana]
gi|332190652|gb|AEE28773.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 657
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 62/273 (22%), Positives = 117/273 (42%), Gaps = 17/273 (6%)
Query: 484 VSHDDAALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVT 543
VS + VI G LD A + +M +GV + Y +L+ AY A E
Sbjct: 287 VSPNAVTYNSVINGFCKAGRLDLAERIRGDMVKSGVDCNERTYGALVDAYGRAGSSDEAL 346
Query: 544 ALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEM--KESKIPRSGHQEFEMLV 601
L + S G+ ++ Y +++ ++ D GA+ + ++M K +I R ++V
Sbjct: 347 RLCDEMTSKGLVVNTVIYNSIVYWLFMEGDIEGAMSVLRDMNSKNMQIDRFTQA---IVV 403
Query: 602 KGCAQNHEAGLMAKLLQEVKEGQRI-DCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLG 660
+G +N + +++ E + + D H N ++H F + + + A++ L M G
Sbjct: 404 RGLCRNGYVKEAVEFQRQISEKKLVEDIVCH--NTLMHHFVRDKKLACADQILGSMLVQG 461
Query: 661 HLPNAQTFHSMVTGYAAIGGKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGF 720
+A +F +++ GY GK E++ M ++++ + +S++ + G
Sbjct: 462 LSLDAISFGTLIDGYLK-EGKLERALEIYDGMIKMNKTSNL----VIYNSIVNGLSKRGM 516
Query: 721 FARANEVVAMMEEGKMFIDKYKYRTLFLKYHKT 753
A VV ME D Y TL + KT
Sbjct: 517 AGAAEAVVNAME----IKDIVTYNTLLNESLKT 545
Score = 46.2 bits (108), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 54/235 (22%), Positives = 102/235 (43%), Gaps = 17/235 (7%)
Query: 524 SVYASLLKAYIEANRPREV-TALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFK 582
S+ A+L+ E P V + L+R ++ G D +++L+++ D GA + +
Sbjct: 115 SIMANLMSVEGEKLSPLHVLSGLIRSYQACGSSPDV--FDSLVRACTQNGDAQGAYEVIE 172
Query: 583 EMKESKIPRSGHQEFEMLVKGCAQN-HEAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFC 641
+ + S H + GC N +E K+ +E+ ++ V+ +N VI+ FC
Sbjct: 173 QTRAEGFCVSVHALNNFM--GCLLNVNEIDRFWKVYKEMDSLGYVE-NVNTFNLVIYSFC 229
Query: 642 KKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEM----KSFAS 697
K+ + +A RM G PN +F+ M+ G A G +L G+M +F S
Sbjct: 230 KESKLFEALSVFYRMLKCGVWPNVVSFNMMIDG-ACKTGDMRFALQLLGKMGMMSGNFVS 288
Query: 698 STSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFIDKYKYRTLFLKYHK 752
++ + +SV+ F + G A + M + + ++ Y L Y +
Sbjct: 289 PNAVTY-----NSVINGFCKAGRLDLAERIRGDMVKSGVDCNERTYGALVDAYGR 338
Score = 43.9 bits (102), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 54/280 (19%), Positives = 109/280 (38%), Gaps = 10/280 (3%)
Query: 494 VITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAG 553
++ C G A++++++ G S + + + N + ++ S G
Sbjct: 154 LVRACTQNGDAQGAYEVIEQTRAEGFCVSVHALNNFMGCLLNVNEIDRFWKVYKEMDSLG 213
Query: 554 IQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKI-PRSGHQEFEMLVKGCAQNHEAGL 612
+ + + ++ S + AL +F M + + P F M++ G + +
Sbjct: 214 YVENVNTFNLVIYSFCKESKLFEALSVFYRMLKCGVWPNV--VSFNMMIDGACKTGDMRF 271
Query: 613 MAKLLQEVK--EGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHS 670
+LL ++ G + +N+VI+ FCK + AE+ M G N +T+ +
Sbjct: 272 ALQLLGKMGMMSGNFVSPNAVTYNSVINGFCKAGRLDLAERIRGDMVKSGVDCNERTYGA 331
Query: 671 MVTGYAAIGGKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAM 730
+V Y G E L EM +S + + + +S++Y G A V+
Sbjct: 332 LVDAYGR-AGSSDEALRLCDEM----TSKGLVVNTVIYNSIVYWLFMEGDIEGAMSVLRD 386
Query: 731 MEEGKMFIDKYKYRTLFLKYHKTLYKGKTPKFQTEAQLKK 770
M M ID++ + + Y + +FQ + KK
Sbjct: 387 MNSKNMQIDRFTQAIVVRGLCRNGYVKEAVEFQRQISEKK 426
>gi|357120648|ref|XP_003562037.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g23020-like [Brachypodium distachyon]
Length = 807
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 62/280 (22%), Positives = 115/280 (41%), Gaps = 22/280 (7%)
Query: 486 HDDAALGHVITLCI---SLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREV 542
H+ + + + LC+ + W D L +MH GV ++ Y +L+ Y + R R
Sbjct: 137 HELNVIHYNVVLCVVGRATRW-DLVVGLWHQMHSCGVVPENATYGTLIDVYCKGGRERAA 195
Query: 543 TALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMK-ESKIPRSGHQEFEMLV 601
L D G+ D +LQ+ + A F+ ES + GH+ + +
Sbjct: 196 LLWLGDMCKRGLVPDEVTMSTVLQAYKKAGEYEKAELFFRRWSSESHKRKEGHRCYNLYT 255
Query: 602 KGCAQNH--EAGLMAKLL----QEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKR 655
+ +AG + K+ Q ++EG D + +N +IH + K M+ ++
Sbjct: 256 YNTLIDTYGKAGQLEKVSDAFSQMLREGVVPD--IFTFNTLIHVWGKHHRMEQVSSLVRM 313
Query: 656 MRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEMKSFASSTSMNF--DEELLDSVLY 713
M LP+ +T++ +++ Y I +V E + F + N D ++LY
Sbjct: 314 MEEFQCLPDTRTYNILISLYREIDE--IDVAEFY-----FCKMKAENLVPDTVSCRTLLY 366
Query: 714 TFVRGGFFARANEVVAMMEEGKMFIDKYKYRTLFLKYHKT 753
+ G +A ++ M+E + ID+Y L Y T
Sbjct: 367 GYSTRGMVTKAEALIKEMDESGLVIDEYTQSALTRMYVNT 406
Score = 42.7 bits (99), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 97/444 (21%), Positives = 176/444 (39%), Gaps = 69/444 (15%)
Query: 252 NTNTFNIALAGCLLFETTRKAEQLLDI------MPRIGVKADSNLLIIMAHIYERNGRRE 305
N T+N L +T KA QL + M R GV D + H++ ++ R E
Sbjct: 252 NLYTYNT------LIDTYGKAGQLEKVSDAFSQMLREGVVPDIFTFNTLIHVWGKHHRME 305
Query: 306 ELRKLQRHIDEAVNLSDIQFRQFYNCLLSCHLKFGDLNSASKMVLEMLQRAKEARNSLAA 365
++ L R ++E L D + YN L+S + + +++ A +M + ++++
Sbjct: 306 QVSSLVRMMEEFQCLPDTRT---YNILISLYREIDEIDVAEFYFCKM-KAENLVPDTVSC 361
Query: 366 AMLPFNAVGVNNRTPSEQNVNCTNSVDLENSGIIENHILSYEDFTKDRKFVALEAEVKRV 425
L + T +E + +++ SG++ I Y R +V
Sbjct: 362 RTLLYGYSTRGMVTKAEALIK-----EMDESGLV---IDEYTQSALTRMYVNT------- 406
Query: 426 LQTLLGMLQKQVELITTEHGILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVS 485
GML++ E Q + + + AF E G +I AEK +
Sbjct: 407 -----GMLERSWRWF--ERFCHQMGSECFSANIDAFGEKG-------CIILAEKAFMCCL 452
Query: 486 HDDAALGHVITLCIS----LGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPRE 541
V + I + LD+A ++ D M GV Y+SL++ A P +
Sbjct: 453 ERKMLCVSVCNVMIKAYGLVEKLDEACEVADCMERYGVLPDYLTYSSLIQLLSTAKLPEK 512
Query: 542 VTALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALH----LFKEMKESKIPRSGHQEF 597
LR +A + +D Y ++ S +KD LH LF+EM S I + +
Sbjct: 513 ALYYLRKMHAAELPIDCVPYSVIISS-FAKKDN---LHMVECLFREMATSGICADAYV-Y 567
Query: 598 EMLVKGCAQ---NHEAGLMAKLLQE--VKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKA 652
+L+ A+ H+A L+ + + E I +N++I + K + +A +
Sbjct: 568 SILIDAYAEVGNVHQAAAYFGLVTKAGLCESSTI------YNSLIKLYTKAGYLAEAHET 621
Query: 653 LKRMRSLGHLPNAQTFHSMVTGYA 676
K ++SL N + M++ Y+
Sbjct: 622 YKLLKSLDTDTNLYASNCMISLYS 645
>gi|297605196|ref|NP_001056837.2| Os06g0152500 [Oryza sativa Japonica Group]
gi|255676726|dbj|BAF18751.2| Os06g0152500 [Oryza sativa Japonica Group]
Length = 717
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 107/432 (24%), Positives = 174/432 (40%), Gaps = 63/432 (14%)
Query: 251 PNTNTFNIALAGCLLFETTRKAEQLLDIMPRIGVKADSNLLII--MAHIYERNGRREELR 308
PN T+N +A AE+++ +M G A NL+ M + + GR E R
Sbjct: 185 PNAVTYNTLVAAFCRAGELDGAERVVSLMREEG-NAKPNLVTFNSMVNGLCKAGRMEGAR 243
Query: 309 KLQRHIDEAVNLSDIQFRQFYNCLLSCHLKFGDLNSASKMVLEMLQRAKEARNSLAAAML 368
K+ DE V YN LLS + K G L+ + + EM QR L ++
Sbjct: 244 KV---FDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRG------LVPDVV 294
Query: 369 PFNAV--GVNNRTPSEQNVNCTNSVDLENSGIIENHILS---YEDFTK----DRKFVALE 419
F ++ EQ V + G+ N + + F K D +A+E
Sbjct: 295 TFTSLIHATCKAGNLEQAVALV--AQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVE 352
Query: 420 AEVKRVLQTLLGMLQKQVELITTEHGILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEK 479
E+++ GI QP+ Y L+ + + G+ +L LI+ E
Sbjct: 353 -EMRKC-------------------GI-QPSVVCYNALINGYCKLGRM-DLARELIR-EM 389
Query: 480 ENLQVSHDDAALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRP 539
E +V D +I+ +G LD A L +M GV + Y+SL++ E R
Sbjct: 390 EAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRL 449
Query: 540 REVTALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEM-KESKIPRSGHQEFE 598
+ L + G+Q D Y L+ + + AL L EM ++ +P +
Sbjct: 450 NDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDV--VTYS 507
Query: 599 MLVKG---CAQNHEAG-LMAKLLQE--VKEGQRID-----CGVHDWNNVIHF---FCKKR 644
+L+ G A+ EA L+ KL E V + + D C ++ +V+ FC K
Sbjct: 508 VLINGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDALMLCCSKAEFKSVVALLKGFCMKG 567
Query: 645 LMQDAEKALKRM 656
LM++A+K + M
Sbjct: 568 LMKEADKVYQSM 579
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 54/265 (20%), Positives = 98/265 (36%), Gaps = 40/265 (15%)
Query: 431 GMLQKQVELITTEHGI-LQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDA 489
G L++ V ++ G P Y LV AF AG+ + ++ +E +
Sbjct: 166 GRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGEL-DGAERVVSLMREEGNAKPNLV 224
Query: 490 ALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDA 549
++ G ++ A + DEM G+ Y +LL Y + E A+ +
Sbjct: 225 TFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEM 284
Query: 550 RSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHE 609
G+ D + +L+ + + A+ L +M+E + R F L+ G
Sbjct: 285 TQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGL-RMNEVTFTALIDG------ 337
Query: 610 AGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFH 669
FCKK + DA A++ MR G P+ ++
Sbjct: 338 ------------------------------FCKKGFLDDALLAVEEMRKCGIQPSVVCYN 367
Query: 670 SMVTGYAAIGGKYTEVTELWGEMKS 694
+++ GY + G+ EL EM++
Sbjct: 368 ALINGYCKL-GRMDLARELIREMEA 391
Score = 42.7 bits (99), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 47/249 (18%), Positives = 107/249 (42%), Gaps = 11/249 (4%)
Query: 430 LGMLQKQVELIT--TEHGILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHD 487
+G L + + + + T+ G++ P + L+ A +AG ++ + + + L++ +
Sbjct: 271 VGCLHESLAVFSEMTQRGLV-PDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRM--N 327
Query: 488 DAALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLR 547
+ +I G+LD A ++EM G++ S Y +L+ Y + R L+R
Sbjct: 328 EVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIR 387
Query: 548 DARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEM-KESKIPRSGHQEFEMLVKGCAQ 606
+ + ++ D Y ++ + A L ++M K+ +P + + L++G +
Sbjct: 388 EMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDA--ITYSSLIRGLCE 445
Query: 607 NHEAGLMAKLLQEVKE-GQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNA 665
+L + + + G + D + +I CK+ ++ A M G LP+
Sbjct: 446 EKRLNDACELFENMLQLGVQPD--EFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDV 503
Query: 666 QTFHSMVTG 674
T+ ++ G
Sbjct: 504 VTYSVLING 512
>gi|326531238|dbj|BAK04970.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 660
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 58/251 (23%), Positives = 112/251 (44%), Gaps = 11/251 (4%)
Query: 447 LQPTEKIYIKLVKAFLEAG---KTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGW 503
++ + IY L+ F AG K + F+ E V+++ L H T+ G
Sbjct: 361 IELSVSIYNALISGFWRAGSIDKAYTIISFMRTNGCEPGVVTYN-ILLNHYCTI----GM 415
Query: 504 LDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEA 563
+++A +L+ +M +GV Y LLK + ++ + A + D G D
Sbjct: 416 MEKAENLITKMETSGVNPDRYSYNQLLKGLCKTHQLDKAFAFVSDHMEVGGFCDIVSCNI 475
Query: 564 LLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEG 623
L+ + K AL LFKEM + K ++ + L+ G L +L +++ +
Sbjct: 476 LIDAFCKVKKVKSALELFKEM-DYKGMQADAVTYGTLINGLFSVGYYNLAEELFEQMLKA 534
Query: 624 QRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYT 683
Q ID V+ +N ++H CK ++ A+K M LP+ T+++++ + +
Sbjct: 535 Q-IDPNVNLYNIMLHHLCKVGDLKRAQKIFLHMIQKEILPDIVTYNTLIY-WLGKNSRAM 592
Query: 684 EVTELWGEMKS 694
E +L+ +M++
Sbjct: 593 EALDLFKDMRT 603
Score = 43.1 bits (100), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 45/212 (21%), Positives = 87/212 (41%), Gaps = 13/212 (6%)
Query: 486 HDDAALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTAL 545
H A+ ++++L G + L + GV S+Y LL Y+ A + V
Sbjct: 118 HSQFAIAYIVSLLFVDGNFALLSEFLGTVRSQGVALHRSLYRILLSGYVRAGKFDSVIGT 177
Query: 546 LRDARSAGIQ---LDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVK 602
+ +G + +D + Y +L ++ + + M SK + +
Sbjct: 178 FDEMVMSGCREFGIDYNRYIGVL----IKNCCFDLVEKYYGMALSKGLCLTPFTYSRWIS 233
Query: 603 GCAQNHEAGLMAKLLQEVKEGQRIDCGVHDW--NNVIHFFCKKRLMQDAEKALKRMRSLG 660
Q++ L+ +LL ++ R W N I CK+ + DA + +++MR G
Sbjct: 234 ALCQSNRIELVEELLADM---DRFGFSPDIWACNIYIDCLCKQNRLHDALQMVEKMRGKG 290
Query: 661 HLPNAQTFHSMVTGYAAIGGKYTEVTELWGEM 692
+P+ T+ ++V G +++E LW EM
Sbjct: 291 TIPDVVTYTTVV-GCLCNNKRFSEAVGLWEEM 321
>gi|449462483|ref|XP_004148970.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
Length = 917
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/232 (23%), Positives = 97/232 (41%), Gaps = 10/232 (4%)
Query: 454 YIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQAHDLLDE 513
Y L+ F +GK K+ + E ++ V D +I + G + +A++LL+
Sbjct: 677 YTSLIHGFCRSGKWKDAKYLF--NEMVDIGVQPDVTTFSVLIDMLCKEGKVIEANELLEV 734
Query: 514 MHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQKD 573
M G ++ Y +L+K +R E T L + G D Y L++ +
Sbjct: 735 MIQRGCIPNTVTYTTLVKGLCMNDRISEATQLFMKMQKLGCLPDVVTYGTLMKGLCQTGN 794
Query: 574 TPGALHLFKEMKESKIPRSGHQ------EFEMLVKGCAQNHEAGLMAKLLQEVKEGQRID 627
AL L K+M S + G + +++ G ++ +L +E+K I
Sbjct: 795 IKTALELHKKML-SDTGQYGTNFKPDVISYSIIIDGLCKHGREDEARELFKEMKALGVIP 853
Query: 628 CGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIG 679
V + ++IH FC+ ++DA+ M G NA T+ M+ G+ G
Sbjct: 854 -NVISYTSLIHGFCRSGKLEDAKHLFNEMVDQGVQLNAVTYSVMIHGFCKEG 904
Score = 42.7 bits (99), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 56/252 (22%), Positives = 98/252 (38%), Gaps = 14/252 (5%)
Query: 448 QPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQ-----VSHDDAALGHVITLCISLG 502
+P Y L+K + GK H + + Q + D +I + G
Sbjct: 302 RPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCIRPDVTTSSMLIDILCKEG 361
Query: 503 WLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYE 562
+ +A++LL+ M G Y++L+K +R E T L + G + DA Y
Sbjct: 362 KVIEANELLEVMIQRGCILDIVTYSTLIKGLCMEHRISEATWLFMSMQKLGCRPDAITYG 421
Query: 563 ALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQ------EFEMLVKGCAQNHEAGLMAKL 616
L++ + AL L +EM R G + + +++ G ++ +L
Sbjct: 422 TLMKGLCQTGNINIALQLHQEMLNDT-GRYGIKCKPTLISYSIIIDGLCKDRREDEAREL 480
Query: 617 LQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYA 676
+E+K Q I V + +IH FC + A+ M +G P+ T S++
Sbjct: 481 FEEMK-AQGIMPDVISYTTLIHGFCLSGKWEKAKCLFNEMLDVGIQPDVTT-SSVLIDML 538
Query: 677 AIGGKYTEVTEL 688
GK E +L
Sbjct: 539 CKKGKVIEANKL 550
Score = 40.8 bits (94), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 50/247 (20%), Positives = 89/247 (36%), Gaps = 43/247 (17%)
Query: 505 DQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEAL 564
D+A +L EM G+ Y SL+ + + + + L + GIQ D +
Sbjct: 182 DEARELFKEMKAQGMMPDVISYTSLIHGFCHSGKWEKAKCLFNEMLDVGIQPDVT----- 236
Query: 565 LQSKIVQKDTPGAL-HLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEG 623
T G L +F KE K+ + M+ +GC +
Sbjct: 237 ---------TSGVLIDMF--CKEGKVIEANELLEVMVHRGCILD---------------- 269
Query: 624 QRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYT 683
+ ++ +I C K + +A + M+ LG P+A + +++ G GK
Sbjct: 270 ------IVTYSTLIKGLCMKHRISEATQLFMSMKKLGCRPDAIAYGTLMKGLCQT-GKIN 322
Query: 684 EVTELWGEMKSFASSTSMNF---DEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFIDK 740
L EM + S + D ++ + G ANE++ +M + +D
Sbjct: 323 IALHLHQEMLNDTSQYGIKCIRPDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDI 382
Query: 741 YKYRTLF 747
Y TL
Sbjct: 383 VTYSTLI 389
>gi|414871052|tpg|DAA49609.1| TPA: hypothetical protein ZEAMMB73_878928 [Zea mays]
Length = 807
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 96/212 (45%), Gaps = 11/212 (5%)
Query: 521 ASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHL 580
+SS V+ +L +Y A + +L S +Q+ + Y++LL S + + D AL +
Sbjct: 145 SSSIVWDALANSYARAQMNHDALYVLSKMNSLNMQISITTYDSLLYS-LRKADV--ALAI 201
Query: 581 FKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEV-KEGQRIDCGVHDWNNVIHF 639
FKEM+ IP S + +L+ G + + G LQE KEG+ G+ +N ++
Sbjct: 202 FKEMESCGIPPSDYSH-GILIDGLCKQGKIGEALSFLQETRKEGKFKPLGM-TFNTLMSA 259
Query: 640 FCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEMKSFASST 699
C +QDA+ M G P+ T+ +++ G +G V E + +S +
Sbjct: 260 LCNWGFIQDAKSVFCLMLKYGLNPSRHTYSTIIHGLCKVG----SVNEAFDIFQS-VTEE 314
Query: 700 SMNFDEELLDSVLYTFVRGGFFARANEVVAMM 731
M D +S++ F G +++ MM
Sbjct: 315 GMELDIVTCNSLINGFRLHGHTREIPKMIEMM 346
Score = 45.4 bits (106), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 56/239 (23%), Positives = 100/239 (41%), Gaps = 28/239 (11%)
Query: 447 LQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVIT---LCISLGW 503
L PT Y L+ A EAGK H ++ KE A+ + + LC L +
Sbjct: 562 LLPTTVTYTTLMDALSEAGKV----HSMLSIFKEMTGKGIRPNAITYSVVIKGLCKQLMF 617
Query: 504 LDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEA 563
D A ++LD+M+ G A Y +L++ + E + + G+ Y
Sbjct: 618 HD-AKNVLDDMYREGFDADPIPYNTLIQGFCETQDAKNAFYVYELMVCRGVMPSPVTYNL 676
Query: 564 LLQSKIVQKDTPGALHLFKEMKESKIPRSGHQ----EFEMLVKG-CAQNHEAGLMAKLLQ 618
L+ ++ L + EMK + G + + L+K CA+ G+ K +
Sbjct: 677 LVNVLCLK-----GLVIHAEMKLESFRKQGAELRKFAYTTLIKAQCAK----GMPYKAIM 727
Query: 619 EVKEGQRIDCG----VHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVT 673
V G+ +D G + D++ I+ CK++ ++A + M S+G P+ Q + + T
Sbjct: 728 WV--GKLLDAGFEASIEDFSAAINRLCKRQFTREALMLISIMLSVGVYPDIQLYRVLGT 784
>gi|242051246|ref|XP_002463367.1| hypothetical protein SORBIDRAFT_02g042500 [Sorghum bicolor]
gi|241926744|gb|EER99888.1| hypothetical protein SORBIDRAFT_02g042500 [Sorghum bicolor]
Length = 543
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/219 (21%), Positives = 102/219 (46%), Gaps = 9/219 (4%)
Query: 529 LLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESK 588
++ + ++ R + ALL + G++L+A CY +LL + +KD L + M+
Sbjct: 138 VVDGFCKSGRVDDARALLDEMPRHGVRLNALCYNSLLDCYVRRKDDARVQELLEIMENGG 197
Query: 589 IPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQD 648
I + + +LV + + + ++ E+K + + V+ + VI+ +C+ ++
Sbjct: 198 I-EATVGTYTILVDSLSTAGDISKVEAVVDEMK-AKNVAGDVYLYTAVINAYCRAGNVRR 255
Query: 649 AEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTE-LWGEMKSFASSTSMNFDEEL 707
A + G PN +T+ ++ G+ IG E E L +M+ + ++ +
Sbjct: 256 ASEVFDECVGNGIEPNERTYGVLINGFCKIG--QMEAAEMLLADMQ----GRGVGHNQII 309
Query: 708 LDSVLYTFVRGGFFARANEVVAMMEEGKMFIDKYKYRTL 746
++++ + R G A +V A ME+ + +D Y Y TL
Sbjct: 310 FNTMIDGYCRQGMVDNALKVKAAMEKMGIELDVYTYNTL 348
Score = 48.1 bits (113), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 53/247 (21%), Positives = 99/247 (40%), Gaps = 7/247 (2%)
Query: 447 LQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQ 506
++P E+ Y L+ F + G+ + L A+ + V H+ +I G +D
Sbjct: 268 IEPNERTYGVLINGFCKIGQMEAAEMLL--ADMQGRGVGHNQIIFNTMIDGYCRQGMVDN 325
Query: 507 AHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQ 566
A + M G+ Y +L NR E LL G+ + Y L+
Sbjct: 326 ALKVKAAMEKMGIELDVYTYNTLACGLCRVNRMAEAKTLLHIMIEKGVPPNYVTYTTLIS 385
Query: 567 SKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEV-KEGQR 625
+ D A LF+EM K + +++ G + + +E+ K+G
Sbjct: 386 IHCKEGDMVEARRLFREMA-GKGAMPSVVTYNVMMDGYIKKGSIREAERFRKEMEKKGLV 444
Query: 626 IDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEV 685
D V+ + +++H C + A K + M+ G PN + ++++G A G+ E
Sbjct: 445 PD--VYTYASLVHGHCVNGKVDVALKLFEEMKHRGTEPNVVAYTALISGLAK-EGRSEEA 501
Query: 686 TELWGEM 692
+L+ +M
Sbjct: 502 FQLYDDM 508
Score = 46.2 bits (108), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 49/243 (20%), Positives = 100/243 (41%), Gaps = 6/243 (2%)
Query: 433 LQKQVELITTEHGILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALG 492
+Q+ +E++ E+G ++ T Y LV + AG ++ + + + +N V+ D
Sbjct: 186 VQELLEIM--ENGGIEATVGTYTILVDSLSTAGDISKVEAVVDEMKAKN--VAGDVYLYT 241
Query: 493 HVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSA 552
VI G + +A ++ DE G+ + Y L+ + + + LL D +
Sbjct: 242 AVINAYCRAGNVRRASEVFDECVGNGIEPNERTYGVLINGFCKIGQMEAAEMLLADMQGR 301
Query: 553 GIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGL 612
G+ + + ++ Q AL + M++ I + + C N A
Sbjct: 302 GVGHNQIIFNTMIDGYCRQGMVDNALKVKAAMEKMGIELDVYTYNTLACGLCRVNRMA-- 359
Query: 613 MAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMV 672
AK L + + + + +I CK+ M +A + + M G +P+ T++ M+
Sbjct: 360 EAKTLLHIMIEKGVPPNYVTYTTLISIHCKEGDMVEARRLFREMAGKGAMPSVVTYNVMM 419
Query: 673 TGY 675
GY
Sbjct: 420 DGY 422
Score = 44.3 bits (103), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 83/388 (21%), Positives = 155/388 (39%), Gaps = 35/388 (9%)
Query: 204 SAILAHMSLTAPGAY--LAAELILEIGYLFQDGRVDPRKKC--NAPLIAMKPNTNTFNIA 259
+AIL + PG+ LAA ++++ G+ + GRVD + P ++ N +N
Sbjct: 116 AAILTRALGSCPGSVSPLAASVVVD-GFC-KSGRVDDARALLDEMPRHGVRLNALCYNSL 173
Query: 260 LAGCLLFETTRKAEQLLDIMPRIGVKADSNLLIIMAHIYERNGRREELRKLQRHIDE--A 317
L + + + ++LL+IM G++A I+ G ++ K++ +DE A
Sbjct: 174 LDCYVRRKDDARVQELLEIMENGGIEATVGTYTILVDSLSTAG---DISKVEAVVDEMKA 230
Query: 318 VNLSDIQFRQFYNCLLSCHLKFGDLNSASKMVLEMLQRAKEARNSLAAAMLPFNAVGVNN 377
N++ + Y +++ + + G++ AS++ E + E N +L +
Sbjct: 231 KNVAGDVY--LYTAVINAYCRAGNVRRASEVFDECVGNGIEP-NERTYGVLINGFCKIGQ 287
Query: 378 RTPSEQNVNCTNSVDLENSGIIENHILSYEDFTKDRKFVALEAEVKRVLQTLLGMLQKQV 437
+E + D++ G+ N I+ F + V L+ M + +
Sbjct: 288 MEAAEMLL-----ADMQGRGVGHNQII----FNTMIDGYCRQGMVDNALKVKAAMEKMGI 338
Query: 438 ELITTEHGILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITL 497
EL + L + V EA K L H +I+ V++ +I++
Sbjct: 339 ELDVYTYNTLA----CGLCRVNRMAEA---KTLLHIMIEKGVPPNYVTYTT-----LISI 386
Query: 498 CISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLD 557
G + +A L EM G S Y ++ YI+ RE ++ G+ D
Sbjct: 387 HCKEGDMVEARRLFREMAGKGAMPSVVTYNVMMDGYIKKGSIREAERFRKEMEKKGLVPD 446
Query: 558 ASCYEALLQSKIVQKDTPGALHLFKEMK 585
Y +L+ V AL LF+EMK
Sbjct: 447 VYTYASLVHGHCVNGKVDVALKLFEEMK 474
>gi|449469290|ref|XP_004152354.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g52620-like [Cucumis sativus]
gi|449484425|ref|XP_004156880.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g52620-like [Cucumis sativus]
Length = 834
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 52/230 (22%), Positives = 90/230 (39%), Gaps = 39/230 (16%)
Query: 447 LQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQ 506
L P + Y LV + + G+ + T +LI+ L+V D + G +I + G +D
Sbjct: 379 LAPNKLTYTPLVHGYCKQGEYTKATDYLIEMSTSGLEV--DMISYGALIHGLVVAGEVDT 436
Query: 507 AHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQ 566
A + D M G+ +++Y L+ + + +L + I DA Y L+
Sbjct: 437 ALTIRDRMMNRGILPDANIYNVLMNGLFKKGKLSMAKVMLTEMLDQNIAPDAFVYATLVD 496
Query: 567 SKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRI 626
I + A LF+ + E KG +
Sbjct: 497 GFIRHGNLDEAKKLFQLIIE---------------KG----------------------L 519
Query: 627 DCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYA 676
D GV +N +I F K +M +A + +MR H+P+ TF +++ GY
Sbjct: 520 DPGVVGYNVMIKGFSKSGMMDNAILCIDKMRRAHHVPDIFTFSTIIDGYV 569
Score = 48.1 bits (113), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 55/115 (47%), Gaps = 5/115 (4%)
Query: 633 WNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEM 692
+N +I +CKK ++ A K K+++ G +P QTF S+V G+ + G + + L EM
Sbjct: 246 YNTLIDGYCKKGEVESAYKLFKKLKMKGFIPTLQTFGSLVNGFCKM-GMFEAIDLLLLEM 304
Query: 693 KSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFIDKYKYRTLF 747
K S ++ ++D+ + GF +A + + M E D Y TL
Sbjct: 305 KDRGLSVNVQMYNNIIDARY----KLGFDIKAKDTLKEMSENCCEPDLVTYNTLI 355
Score = 42.7 bits (99), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 43/206 (20%), Positives = 81/206 (39%), Gaps = 50/206 (24%)
Query: 502 GWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCY 561
G ++ A+ L ++ + G + + SL+ + + + LL + + G+ ++ Y
Sbjct: 257 GEVESAYKLFKKLKMKGFIPTLQTFGSLVNGFCKMGMFEAIDLLLLEMKDRGLSVNVQMY 316
Query: 562 EALLQSK------IVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAK 615
++ ++ I KDT KEM E+ C E L+
Sbjct: 317 NNIIDARYKLGFDIKAKDT------LKEMSEN----------------CC---EPDLVT- 350
Query: 616 LLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGY 675
+N +I+ FC + +++AEK L++ G PN T+ +V GY
Sbjct: 351 -----------------YNTLINHFCSRGEVEEAEKLLEQTIRRGLAPNKLTYTPLVHGY 393
Query: 676 AAIGGKYTEVTELWGEMKSFASSTSM 701
G+YT+ T+ EM + M
Sbjct: 394 CK-QGEYTKATDYLIEMSTSGLEVDM 418
>gi|449467657|ref|XP_004151539.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g16010-like [Cucumis sativus]
Length = 637
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/239 (21%), Positives = 107/239 (44%), Gaps = 11/239 (4%)
Query: 511 LDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIV 570
++M G+ SS YA L+ + + NR + LL + G + Y +L+ S
Sbjct: 394 FEKMKANGIAPSSFTYAILIDGFCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLIDSLGR 453
Query: 571 QKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRIDCG- 629
K A LF+E+KE+ RS + + +++K G ++ + E +++ C
Sbjct: 454 AKRYEAANELFQELKEN-CGRSSARVYAVMIKHFGN---CGRLSDAVDLFCEMKKLGCSP 509
Query: 630 -VHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTEL 688
V+ +N ++ + ++ +A ++ MR G P+ ++ + ++ G A GG + E+
Sbjct: 510 DVYTYNALMSGMIRAGMIDEAHSLMRNMRENGCTPDIKSHNIILNGLAKTGGPKRAI-EM 568
Query: 689 WGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFIDKYKYRTLF 747
+ +MK + + D +++L R G F A +++ M+ D Y ++
Sbjct: 569 FTKMK----ESEIMPDAVSYNTILSCLSRAGMFEMAAKLMREMKLKGFEYDSITYSSIL 623
Score = 40.0 bits (92), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 37/88 (42%)
Query: 502 GWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCY 561
G L A DL EM G Y +L+ I A E +L+R+ R G D +
Sbjct: 490 GRLSDAVDLFCEMKKLGCSPDVYTYNALMSGMIRAGMIDEAHSLMRNMRENGCTPDIKSH 549
Query: 562 EALLQSKIVQKDTPGALHLFKEMKESKI 589
+L A+ +F +MKES+I
Sbjct: 550 NIILNGLAKTGGPKRAIEMFTKMKESEI 577
>gi|449459086|ref|XP_004147277.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59900-like [Cucumis sativus]
gi|449501214|ref|XP_004161309.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59900-like [Cucumis sativus]
Length = 908
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 61/259 (23%), Positives = 109/259 (42%), Gaps = 7/259 (2%)
Query: 488 DAALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLR 547
+AA+ +I I +G ++ A +LL+++ GV + VY S++ + + + E L
Sbjct: 330 EAAVSGLIEGLIKMGSIEGAFELLNKVGKLGVVPNLFVYNSMINSLCKTGKLEEAELLFS 389
Query: 548 DARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQN 607
G+ + Y L+ + A + F +M E I + + M+ C
Sbjct: 390 VMAERGLNPNDVTYTILIDGFGRRAKLDVAFYYFNKMIECGISATVYSYNSMI--NCQCK 447
Query: 608 HEAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQT 667
MA+LL + + + V + ++I +CK L+ A K M G PN T
Sbjct: 448 FGKMKMAELLFKEMVDKGLKPTVATYTSLISGYCKDGLVPKAFKLYHEMTGKGIAPNTVT 507
Query: 668 FHSMVTGYAAIGGKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEV 727
F +++ G I K E ++L+ EM +E + ++ R G RA E+
Sbjct: 508 FTALICGLCQI-NKMAEASKLFDEMVELKILP----NEVTYNVLIEGHCREGNTTRAFEL 562
Query: 728 VAMMEEGKMFIDKYKYRTL 746
+ M + + D Y YR L
Sbjct: 563 LDEMIKKGLSPDTYTYRPL 581
Score = 44.3 bits (103), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 96/512 (18%), Positives = 193/512 (37%), Gaps = 46/512 (8%)
Query: 247 IAMKPNTNTFNIALAGCLLFETTRKAEQLLDIMPRIGVKADSNLLIIMAHIYERNGRREE 306
+ + PN +N + +AE L +M G+ + I+ + GRR +
Sbjct: 359 LGVVPNLFVYNSMINSLCKTGKLEEAELLFSVMAERGLNPNDVTYTILIDGF---GRRAK 415
Query: 307 LRKLQRHIDEAVNLSDIQFRQFYNCLLSCHLKFGDLNSASKMVLEMLQRAKEARNSLAAA 366
L + ++ + YN +++C KFG + A + EM+ + + ++A
Sbjct: 416 LDVAFYYFNKMIECGISATVYSYNSMINCQCKFGKMKMAELLFKEMVDKG--LKPTVATY 473
Query: 367 MLPFNAVGVNNRTPSEQNVNCTNSVDLENSGIIENHILSYEDFTKDRKFVALEAEVKRV- 425
+ + P + ++ GI N + F AL + ++
Sbjct: 474 TSLISGYCKDGLVPKAFKL----YHEMTGKGIAPNTV----------TFTALICGLCQIN 519
Query: 426 -LQTLLGMLQKQVELITTEHGILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQV 484
+ + + VEL + P E Y L++ G T L + K+ L
Sbjct: 520 KMAEASKLFDEMVELK------ILPNEVTYNVLIEGHCREGNTTRAFELLDEMIKKGL-- 571
Query: 485 SHDDAALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTA 544
S D +I S G + +A + ++++H R Y +LL+ + + R +E
Sbjct: 572 SPDTYTYRPLIAGLCSTGRVSEAKEFINDLHHKHQRLDELCYTALLQGFCKEGRIKEALV 631
Query: 545 LLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGC 604
++ G+Q+D Y L+ + Q D L +EM K + + + +L+ G
Sbjct: 632 ARQEMVGRGLQMDLVSYAVLISGALNQNDRI-LFELLREM-HGKGMQPDNVIYTILIDGF 689
Query: 605 AQNHEAGLMAKLLQ--EVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHL 662
+ +G + K + + G+ + +++ K + +A+ KRM +
Sbjct: 690 IK---SGNLKKAFEFWYIMIGEGYVPNSVTYTALVNGLFKAGYVNEAKLLFKRMLVGEAI 746
Query: 663 PNAQTFHSMVTGYAAIGGKYTEVTELWGEM--KSFASSTSMNFDEELLDSVLYTFVRGGF 720
PN T+ + + G +L M SFA++ + N ++ + + G
Sbjct: 747 PNHITYGCFLD-HLTKEGNMENALQLHNAMLQGSFANTVTYNI-------LIRGYCQIGK 798
Query: 721 FARANEVVAMMEEGKMFIDKYKYRTLFLKYHK 752
F A +++ +M M D Y T +Y K
Sbjct: 799 FQEAAKLLDVMIGIGMVPDCITYSTFIYEYCK 830
Score = 42.0 bits (97), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 42/190 (22%), Positives = 78/190 (41%), Gaps = 11/190 (5%)
Query: 494 VITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAG 553
V+ LC + + +++DEM G S + + L++ I+ LL G
Sbjct: 302 VLGLC-RIQEFEVGMEMMDEMIELGYVPSEAAVSGLIEGLIKMGSIEGAFELLNKVGKLG 360
Query: 554 IQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLM 613
+ + Y +++ S A LF M E + + +L+ G + + +
Sbjct: 361 VVPNLFVYNSMINSLCKTGKLEEAELLFSVMAERGL-NPNDVTYTILIDGFGRRAKLDVA 419
Query: 614 AKLLQEVKEGQRIDCG----VHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFH 669
++ I+CG V+ +N++I+ CK M+ AE K M G P T+
Sbjct: 420 FYYFNKM-----IECGISATVYSYNSMINCQCKFGKMKMAELLFKEMVDKGLKPTVATYT 474
Query: 670 SMVTGYAAIG 679
S+++GY G
Sbjct: 475 SLISGYCKDG 484
Score = 40.4 bits (93), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 54/239 (22%), Positives = 97/239 (40%), Gaps = 26/239 (10%)
Query: 451 EKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQAH-- 508
E Y L++ F + G+ KE + + E + D + +I+ G L+Q
Sbjct: 610 ELCYTALLQGFCKEGRIKE--ALVARQEMVGRGLQMDLVSYAVLIS-----GALNQNDRI 662
Query: 509 --DLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQ 566
+LL EMH G++ + +Y L+ +I++ ++ G ++ Y AL+
Sbjct: 663 LFELLREMHGKGMQPDNVIYTILIDGFIKSGNLKKAFEFWYIMIGEGYVPNSVTYTALVN 722
Query: 567 SKIVQKDTPGALHLFKEMKESK-IPRSGHQEFEMLVKGCAQNH--EAGLMAKLLQ---EV 620
A LFK M + IP + GC +H + G M LQ +
Sbjct: 723 GLFKAGYVNEAKLLFKRMLVGEAIPNH-------ITYGCFLDHLTKEGNMENALQLHNAM 775
Query: 621 KEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIG 679
+G + +N +I +C+ Q+A K L M +G +P+ T+ + + Y G
Sbjct: 776 LQGSFAN--TVTYNILIRGYCQIGKFQEAAKLLDVMIGIGMVPDCITYSTFIYEYCKRG 832
>gi|302808965|ref|XP_002986176.1| hypothetical protein SELMODRAFT_182249 [Selaginella moellendorffii]
gi|300146035|gb|EFJ12707.1| hypothetical protein SELMODRAFT_182249 [Selaginella moellendorffii]
Length = 609
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 57/246 (23%), Positives = 97/246 (39%), Gaps = 41/246 (16%)
Query: 449 PTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQAH 508
P +Y ++ AF ++GK E L + K+ + S D VI LG + +A
Sbjct: 352 PDVVVYSSIIHAFCKSGKLLEAQKTLQEMRKQ--RKSPDVVTYNTVIDGLCKLGKIAEAQ 409
Query: 509 DLLDEMHLAG-VRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQS 567
+L++M +G V Y++++ +++ E LL AG D Y ++
Sbjct: 410 VILEQMQESGDVLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDG 469
Query: 568 KIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRID 627
A +L + MK + GCA N
Sbjct: 470 LCKCGRLEEAEYLLQGMKRA---------------GCAPN-------------------- 494
Query: 628 CGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTE 687
V + +I CK R + +AE+ ++ MR+ G PN T+++MV G + G+ E +
Sbjct: 495 --VVTYTTLISGLCKARKVDEAERVMEEMRNAGCPPNLVTYNTMVNGL-CVSGRIKEAQQ 551
Query: 688 LWGEMK 693
L MK
Sbjct: 552 LVQRMK 557
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 49/213 (23%), Positives = 89/213 (41%), Gaps = 7/213 (3%)
Query: 449 PTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVIT-LCISLGWLDQA 507
P Y ++ + GK E +++ +E+ V D VI LC S L +A
Sbjct: 387 PDVVTYNTVIDGLCKLGKIAE-AQVILEQMQESGDVLPDVVTYSTVINGLCKS-DMLVEA 444
Query: 508 HDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQS 567
LLD M AG Y +++ + R E LL+ + AG + Y L+
Sbjct: 445 QKLLDRMCKAGCNPDVVTYTTIIDGLCKCGRLEEAEYLLQGMKRAGCAPNVVTYTTLISG 504
Query: 568 KIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRID 627
+ A + +EM+ + P + +V G + +L+Q +K+G R +
Sbjct: 505 LCKARKVDEAERVMEEMRNAGCP-PNLVTYNTMVNGLCVSGRIKEAQQLVQRMKDG-RAE 562
Query: 628 CG--VHDWNNVIHFFCKKRLMQDAEKALKRMRS 658
C + +++ L+Q+AE+ L++M+S
Sbjct: 563 CSPDAATYRTIVNALMSSDLVQEAEQLLEQMKS 595
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 60/271 (22%), Positives = 106/271 (39%), Gaps = 16/271 (5%)
Query: 506 QAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALL 565
+A DL LA Y ++ + A LL + +SAG DA + ++
Sbjct: 95 EAGDLFRSELLASCEPDVCSYNIVISGFCNAGDLHAALELLEEMKSAGFAPDAFTHTPII 154
Query: 566 QSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQR 625
+ D GA+ + M + L+ A+ + KLL+E++E +
Sbjct: 155 TAMANAGDLDGAMDHLRSMGCD----PNVVTYTALIAAFARAKKLEEAMKLLEEMRE-RG 209
Query: 626 IDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEV 685
+ +N ++ CK ++ A+ +K+M G PN TF+S+V G+ G +
Sbjct: 210 CPPNLVTYNVLVDALCKLSMVGAAQDVVKKMIEGGFAPNVMTFNSLVDGFCK-RGNVDDA 268
Query: 686 TELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFIDKYKYRT 745
+L G M + ++ L+D + F A EV+ M+ + D + Y
Sbjct: 269 RKLLGIMVAKGMRPNVVTYSALIDG----LCKSQKFLEAKEVLEEMKTRGVTPDAFTYSA 324
Query: 746 LFLKYHKTLYKGKTPKFQTEAQLKKREAALG 776
L H K K + Q+ +R A G
Sbjct: 325 LI---HGLC---KADKIEEAEQMLRRMAGSG 349
Score = 49.7 bits (117), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 48/219 (21%), Positives = 85/219 (38%), Gaps = 46/219 (21%)
Query: 502 GWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCY 561
G +D A LL M G+R + Y++L+ ++ + E +L + ++ G+ DA Y
Sbjct: 263 GNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLEAKEVLEEMKTRGVTPDAFTY 322
Query: 562 EALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVK 621
AL+ K KI + M GC +
Sbjct: 323 SALIHGLC---------------KADKIEEAEQMLRRMAGSGCTPD-------------- 353
Query: 622 EGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGK 681
V ++++IH FCK + +A+K L+ MR P+ T+++++ G + GK
Sbjct: 354 --------VVVYSSIIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKL-GK 404
Query: 682 YTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGF 720
E + +M+ + L D V Y+ V G
Sbjct: 405 IAEAQVILEQMQESG--------DVLPDVVTYSTVINGL 435
>gi|224143015|ref|XP_002324819.1| predicted protein [Populus trichocarpa]
gi|222866253|gb|EEF03384.1| predicted protein [Populus trichocarpa]
Length = 552
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 59/283 (20%), Positives = 121/283 (42%), Gaps = 16/283 (5%)
Query: 473 FLIKAEKENLQVSHDDAALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKA 532
+ I ++ E ++ D VI G ++ A + +M G++ ++S Y +L+K
Sbjct: 68 YSIISQVEENGMNPDSIFFNAVINAFSESGNMESAMETFWKMQENGMKPTTSTYNTLIKG 127
Query: 533 YIEANRPREVTALLRDARSAG-IQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPR 591
Y A +P E LL G ++ + Y L+++ +K A ++ +M S I +
Sbjct: 128 YGIAGKPEESVKLLELMSQEGNVKPNLRTYNVLVRAWCNKKRITEAWNVVYKMIASGI-Q 186
Query: 592 SGHQEFEMLVKGCAQ----NHEAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQ 647
+ + AQ + G++ ++ + CG+ ++ +CK+ ++
Sbjct: 187 PDVVTYNTIATAYAQKGALDQAEGVILEMQNNGVQPNERTCGI-----IMSGYCKEGRIR 241
Query: 648 DAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEMKSFASSTSMNFDEEL 707
+A + RM+ LG PN F+S++ G+ AI + V E+ M+ F + D
Sbjct: 242 EALRFAYRMKELGIHPNLVIFNSLIKGFVAIMDR-DGVDEVLNLMEEFG----VKPDVIT 296
Query: 708 LDSVLYTFVRGGFFARANEVVAMMEEGKMFIDKYKYRTLFLKY 750
+++ + GF + E+ M + + D + Y L Y
Sbjct: 297 FSTIMNAWSTAGFMEKCREIFDDMVKAGIEPDAHAYSILAKGY 339
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 63/303 (20%), Positives = 128/303 (42%), Gaps = 18/303 (5%)
Query: 435 KQVELITTEHGILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHV 494
K +EL++ E G ++P + Y LV+A+ + E + + K +Q D +
Sbjct: 139 KLLELMSQE-GNVKPNLRTYNVLVRAWCNKKRITEAWNVVYKMIASGIQ--PDVVTYNTI 195
Query: 495 ITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGI 554
T G LDQA ++ EM GV+ + ++ Y + R RE + GI
Sbjct: 196 ATAYAQKGALDQAEGVILEMQNNGVQPNERTCGIIMSGYCKEGRIREALRFAYRMKELGI 255
Query: 555 QLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMA 614
+ + +L++ + D G + M+E + + F ++ + AG M
Sbjct: 256 HPNLVIFNSLIKGFVAIMDRDGVDEVLNLMEEFGV-KPDVITFSTIMNAWST---AGFME 311
Query: 615 KLLQ----EVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHS 670
K + VK G I+ H ++ + + + + + AE+ L M G PN F +
Sbjct: 312 KCREIFDDMVKAG--IEPDAHAYSILAKGYVRAQEPEKAEELLTTMIKSGFQPNVVIFTT 369
Query: 671 MVTGYAAIGGKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAM 730
+++G+ + GK ++ +M S ++ + +++++ F +A E++ +
Sbjct: 370 VISGWCS-AGKMDYAVRVFDKMCQRGISPNL----KTFETLIWGFAEARQPWKAEEILQI 424
Query: 731 MEE 733
M E
Sbjct: 425 MTE 427
Score = 47.4 bits (111), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 33/175 (18%), Positives = 78/175 (44%), Gaps = 1/175 (0%)
Query: 506 QAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALL 565
+A + + G + S Y +LL A R + +++ G+ D+ + A++
Sbjct: 31 EAESIFYSLIEGGHKPSLISYTTLLAALTMQKRFDSIYSIISQVEENGMNPDSIFFNAVI 90
Query: 566 QSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQR 625
+ + A+ F +M+E+ + + + L+KG + KLL+ + +
Sbjct: 91 NAFSESGNMESAMETFWKMQENGM-KPTTSTYNTLIKGYGIAGKPEESVKLLELMSQEGN 149
Query: 626 IDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGG 680
+ + +N ++ +C K+ + +A + +M + G P+ T++++ T YA G
Sbjct: 150 VKPNLRTYNVLVRAWCNKKRITEAWNVVYKMIASGIQPDVVTYNTIATAYAQKGA 204
>gi|359495626|ref|XP_002269600.2| PREDICTED: pentatricopeptide repeat-containing protein At4g16390,
chloroplastic [Vitis vinifera]
Length = 701
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 53/231 (22%), Positives = 96/231 (41%), Gaps = 7/231 (3%)
Query: 448 QPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQA 507
P + Y ++ A+ AG +A E ++ D +I + G D
Sbjct: 243 HPDDVTYSAMIDAYGRAGNVDMALKLYDRARTEKWRI--DPVTFSTLIRIYGMSGNFDGC 300
Query: 508 HDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQS 567
++ +EM GV+ + +Y +LL A A RP + + ++ + G+Q Y ALL++
Sbjct: 301 LNVYEEMKALGVKPNLVIYNTLLDAMGRAKRPWQAKNIYKEMTNNGLQPSWGTYAALLRA 360
Query: 568 KIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRID 627
+ AL ++KEMKE + S + L+ CA A + +++K +
Sbjct: 361 YGRARYAEDALIVYKEMKEKGLELSVVL-YNTLLAMCADVGYTEEAAAIFEDMKSSG--N 417
Query: 628 CGVHDW--NNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYA 676
C W +++I + + +AE L M G PN S++ Y
Sbjct: 418 CMPDSWTFSSLITIYSCSGKVSEAEAMLNAMLEAGFEPNIFVLTSLIQCYG 468
>gi|242042646|ref|XP_002459194.1| hypothetical protein SORBIDRAFT_02g000310 [Sorghum bicolor]
gi|241922571|gb|EER95715.1| hypothetical protein SORBIDRAFT_02g000310 [Sorghum bicolor]
Length = 847
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 59/266 (22%), Positives = 108/266 (40%), Gaps = 13/266 (4%)
Query: 431 GMLQKQVELITTEHGILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAA 490
G L++ V L+ + + P Y L++ + K +E +L + N DD
Sbjct: 164 GRLEEAVALVESMDAYIAPDVVTYNTLMRGLCKDSKVQEAAQYLRRMM--NQGCIPDDFT 221
Query: 491 LGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDAR 550
+I L +A +LL + G Y SL+ L +A+
Sbjct: 222 YNTIIDGYCKRDMLQEATELLKDAIFKGFVPDRVTYCSLINGLCAEGDVERALELFNEAQ 281
Query: 551 SAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQE---FEMLVKG-CAQ 606
+ ++ D Y +L++ Q AL + EM E H + + +++ G C
Sbjct: 282 AKDLKPDLVVYNSLVKGLCRQGLILHALQVMNEMVED----GCHPDIWTYNIVINGLCKM 337
Query: 607 NHEAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQ 666
+ + + + +G D V +N +I +CK+ + A + ++RM G P+A
Sbjct: 338 GNISDAAVVMNDAIVKGYLPD--VFTFNTMIDGYCKRLKLDSALQLVERMWMYGIAPDAI 395
Query: 667 TFHSMVTGYAAIGGKYTEVTELWGEM 692
T++S++ G GK EV E + EM
Sbjct: 396 TYNSVLNGLCK-AGKAKEVNETFEEM 420
Score = 42.7 bits (99), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 53/245 (21%), Positives = 99/245 (40%), Gaps = 14/245 (5%)
Query: 506 QAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALL 565
A L DEM V + + ++L A + E ALL G+ ++ +
Sbjct: 98 DARHLFDEMLRRDVFPDVATFNNVLHALCQKGDIMESGALLAKVLKRGMSVNKFTCNIWI 157
Query: 566 QSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEV-KEGQ 624
+ A+ L + M P + L++G ++ + A+ L+ + +G
Sbjct: 158 RGLCEGGRLEEAVALVESMDAYIAPDV--VTYNTLMRGLCKDSKVQEAAQYLRRMMNQG- 214
Query: 625 RIDCGVHD--WNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKY 682
C D +N +I +CK+ ++Q+A + LK G +P+ T+ S++ G A G
Sbjct: 215 ---CIPDDFTYNTIIDGYCKRDMLQEATELLKDAIFKGFVPDRVTYCSLINGLCA-EGDV 270
Query: 683 TEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFIDKYK 742
EL+ E A + + D + +S++ R G A +V+ M E D +
Sbjct: 271 ERALELFNE----AQAKDLKPDLVVYNSLVKGLCRQGLILHALQVMNEMVEDGCHPDIWT 326
Query: 743 YRTLF 747
Y +
Sbjct: 327 YNIVI 331
>gi|357499959|ref|XP_003620268.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495283|gb|AES76486.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 652
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 63/337 (18%), Positives = 132/337 (39%), Gaps = 14/337 (4%)
Query: 447 LQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQ 506
+ P Y L+ F GK + K EN++ D ++ G + +
Sbjct: 256 ISPDVVTYSALISGFCILGKLNDAIDLFNKMILENIK--PDVYTFNILVNAFCKDGKMKE 313
Query: 507 AHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQ 566
+ D M G++ + Y SL+ Y + ++ G+ D Y ++
Sbjct: 314 GKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDIQSYSIMIN 373
Query: 567 SKIVQKDTPGALHLFKEM-KESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQR 625
K A++LFKEM +++ IP + L+ G +++ +L+ ++ + +
Sbjct: 374 GFCKIKKFDEAMNLFKEMHRKNIIPDV--VTYSSLIDGLSKSGRISYALQLVDQMHD-RG 430
Query: 626 IDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEV 685
+ + +N+++ CK + A L +++ G PN T+ ++ G GK +
Sbjct: 431 VPPTIRTYNSILDALCKIHQVDKAIALLTKLKDKGIQPNMYTYSILIKGLCQ-SGKLEDA 489
Query: 686 TELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFIDKYKYRT 745
+++ + ++N D + ++ F G F A +++ ME+ D Y
Sbjct: 490 RKVFEGL--LVKGHNLNVDTYTI--MIQGFCVEGLFNEALALLSKMEDNGCIPDAKTYEI 545
Query: 746 LFLKYHKTLYKGKTPKFQTEA---QLKKREAALGFKK 779
+ L K K E ++ R+ A+ F+K
Sbjct: 546 IILSLFKKDENDMAEKLLREMIARGVRPRQIAIWFQK 582
Score = 46.2 bits (108), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 72/186 (38%), Gaps = 11/186 (5%)
Query: 497 LCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQL 556
LC+ G + QA D++ G Y +L+ + R LL+ +Q
Sbjct: 165 LCLK-GQIQQAFLFHDKVVALGFHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQP 223
Query: 557 DASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCA----QNHEAGL 612
+ Y ++ S K A LF EM I + L+ G N L
Sbjct: 224 NVVMYNTIIDSMCKVKLVNEAFDLFSEMISKGI-SPDVVTYSALISGFCILGKLNDAIDL 282
Query: 613 MAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMV 672
K++ E I V+ +N +++ FCK M++ + M G PN T++S++
Sbjct: 283 FNKMILE-----NIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLM 337
Query: 673 TGYAAI 678
GY +
Sbjct: 338 DGYCLV 343
>gi|414586743|tpg|DAA37314.1| TPA: hypothetical protein ZEAMMB73_981845 [Zea mays]
Length = 524
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 86/203 (42%), Gaps = 35/203 (17%)
Query: 506 QAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALL 565
+A ++ +EM GVRA++ Y SL+ + + +E L A GI+ D Y AL+
Sbjct: 307 KALEVFEEMSQKGVRATAVTYTSLIYVFSRKGQVQETDRLFNVAVKKGIRPDVVMYNALI 366
Query: 566 QSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKG-C--AQNHEA----------GL 612
S D A + EM++ +IP + L++G C + EA G+
Sbjct: 367 NSHCTGGDMERAYEIMAEMEKKRIP-PDDMTYNTLMRGFCLLGRLDEARTLIDEMTKRGI 425
Query: 613 MAKLLQ------------EVKEGQRIDCGVHD---------WNNVIHFFCKKRLMQDAEK 651
L+ ++K+ R+ + D +N +I CK R DAE
Sbjct: 426 QPDLVSYNTLISGYSMKGDIKDALRVRDEMMDKGFNPTLMTYNALIQGLCKIRQGDDAEN 485
Query: 652 ALKRMRSLGHLPNAQTFHSMVTG 674
+K M + G P+ T+ S++ G
Sbjct: 486 LMKEMVAKGITPDDSTYISLIEG 508
Score = 44.7 bits (104), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 82/366 (22%), Positives = 142/366 (38%), Gaps = 50/366 (13%)
Query: 250 KPNTNTFNIALAG-CLLFETTRKAEQLLDIMPRIGVKADSNLLIIMAHIYERNGRREELR 308
+PN T+N +AG C E + ++ R G+ D + + + GR E+
Sbjct: 144 RPNAVTYNTVIAGFCARGRVQAALEVMREMRERGGIAPDKYTYATLISGWCKIGRMEDAV 203
Query: 309 KLQRHIDEAVNLSDIQFRQ-FYNCLLSCHLKFGDLNSASKMVLEMLQRAKEARNSLAAAM 367
K+ DE + ++ YN L+ + G L+ A + +M+QR ++A
Sbjct: 204 KV---FDEMLTKGEVAPSAVMYNALIGGYCDVGKLDVALQYREDMVQRGIAM--TVATYN 258
Query: 368 LPFNAVGVNNRTPSEQNVNCTNSVDLENSGIIENHILSYEDFTKDRKFVAL--EAEVKRV 425
L +A+ ++ R V LE ++ + S + FT + E K+
Sbjct: 259 LLMHALFMDARASDAYAV-------LEE---MQKNGFSPDVFTYNILINGYCKEGNEKKA 308
Query: 426 LQTLLGMLQKQVE----------LITTEHGILQPTEKI---------------YIKLVKA 460
L+ M QK V + + G +Q T+++ Y L+ +
Sbjct: 309 LEVFEEMSQKGVRATAVTYTSLIYVFSRKGQVQETDRLFNVAVKKGIRPDVVMYNALINS 368
Query: 461 FLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQAHDLLDEMHLAGVR 520
G + + I AE E ++ DD ++ LG LD+A L+DEM G++
Sbjct: 369 HCTGGDMER--AYEIMAEMEKKRIPPDDMTYNTLMRGFCLLGRLDEARTLIDEMTKRGIQ 426
Query: 521 ASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQS--KIVQKDTPGAL 578
Y +L+ Y ++ + + G Y AL+Q KI Q D A
Sbjct: 427 PDLVSYNTLISGYSMKGDIKDALRVRDEMMDKGFNPTLMTYNALIQGLCKIRQGD--DAE 484
Query: 579 HLFKEM 584
+L KEM
Sbjct: 485 NLMKEM 490
Score = 44.7 bits (104), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 58/301 (19%), Positives = 116/301 (38%), Gaps = 44/301 (14%)
Query: 448 QPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQA 507
+P Y ++ F G+ + +++ +E ++ D +I+ +G ++ A
Sbjct: 144 RPNAVTYNTVIAGFCARGRVQAALE-VMREMRERGGIAPDKYTYATLISGWCKIGRMEDA 202
Query: 508 HDLLDEMHLAGVRASSSV-YASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQ 566
+ DEM G A S+V Y +L+ Y + + D GI + + Y L+
Sbjct: 203 VKVFDEMLTKGEVAPSAVMYNALIGGYCDVGKLDVALQYREDMVQRGIAMTVATYNLLMH 262
Query: 567 SKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRI 626
+ + A + +EM+ K G
Sbjct: 263 ALFMDARASDAYAVLEEMQ-----------------------------------KNGFSP 287
Query: 627 DCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVT 686
D V +N +I+ +CK+ + A + + M G A T+ S++ ++ G+ E
Sbjct: 288 D--VFTYNILINGYCKEGNEKKALEVFEEMSQKGVRATAVTYTSLIYVFSR-KGQVQETD 344
Query: 687 ELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFIDKYKYRTL 746
L+ + A + D + ++++ + GG RA E++A ME+ ++ D Y TL
Sbjct: 345 RLF----NVAVKKGIRPDVVMYNALINSHCTGGDMERAYEIMAEMEKKRIPPDDMTYNTL 400
Query: 747 F 747
Sbjct: 401 M 401
>gi|357494039|ref|XP_003617308.1| Auxin response factor [Medicago truncatula]
gi|355518643|gb|AET00267.1| Auxin response factor [Medicago truncatula]
Length = 948
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 71/314 (22%), Positives = 130/314 (41%), Gaps = 34/314 (10%)
Query: 446 ILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVS--HDDAALGHVIT--LCISL 501
I P +Y L+ ++ +G+ +E L K N+ ++ DA +++ LC
Sbjct: 331 IPNPNTVLYNTLINGYVVSGRFEEAKDLLYK----NMVIAGFEPDAFTFNIMIDGLC-KK 385
Query: 502 GWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCY 561
G+L A + LDEM G + Y L+ + + E + ++ + G+ L+ Y
Sbjct: 386 GYLVSALEFLDEMVKKGFEPNVITYTILIDGFCKQGHFEEASKVVNSMSAKGLSLNTVGY 445
Query: 562 EALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEA----GLMAKLL 617
L+ + AL ++ EM SK + F L+ G +N + GL +L
Sbjct: 446 NCLIGALCKDGKIQDALQMYGEM-SSKGCKPDIYTFNSLIYGLCKNDKMEEALGLYRDML 504
Query: 618 QEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAA 677
E + +N +IH F + L+Q A+K + MR G + T++ ++
Sbjct: 505 LEGVIANTV-----TYNTLIHAFLRLELIQQADKLVGEMRFRGCPLDNITYNGLIKALCK 559
Query: 678 IGGKYTE-----VTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMME 732
G TE + +++GE + F S S N ++ +F R G A + + M
Sbjct: 560 TGA--TEKCLGLIEQMFGE-EIFPSINSCNI-------LINSFCRTGKVNDALQFLRDMI 609
Query: 733 EGKMFIDKYKYRTL 746
+ + D Y +L
Sbjct: 610 QRGLTPDIVTYNSL 623
Score = 49.3 bits (116), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 39/176 (22%), Positives = 81/176 (46%), Gaps = 2/176 (1%)
Query: 504 LDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEA 563
+++A L +M L GV A++ Y +L+ A++ ++ L+ + R G LD Y
Sbjct: 493 MEEALGLYRDMLLEGVIANTVTYNTLIHAFLRLELIQQADKLVGEMRFRGCPLDNITYNG 552
Query: 564 LLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEG 623
L+++ T L L ++M +I S + ++ C + L ++ G
Sbjct: 553 LIKALCKTGATEKCLGLIEQMFGEEIFPSINSCNILINSFCRTGKVNDALQFLRDMIQRG 612
Query: 624 QRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIG 679
D + +N++I+ CK Q+A +++ G P+A T++++++ Y G
Sbjct: 613 LTPD--IVTYNSLINGLCKMGRFQEALNLFNGLQAKGIHPDAVTYNTLISRYCYEG 666
Score = 44.7 bits (104), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 46/212 (21%), Positives = 85/212 (40%), Gaps = 38/212 (17%)
Query: 510 LLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKI 569
LLD + + Y +L+ + N P+ + D S GI + ++++
Sbjct: 152 LLDMWGVYCFEPTFKSYNVVLEILVAGNCPKVAPNVFYDMLSRGISPTVYTFGVVMKAFC 211
Query: 570 VQKDTPGALHLFKEM-KESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEV-KEGQRID 627
+ + A L ++M K +P S ++ML+ ++N+ KLL+E+ G D
Sbjct: 212 MVNEVDSACSLLRDMTKHGCVPNS--IIYQMLIHALSENNRVNEAMKLLEEMFLMGCEPD 269
Query: 628 CGVHDWNNVIHFFCKKRLMQDAEKALKRM-----------------------------RS 658
V +N+VIH CK + +A K RM
Sbjct: 270 --VQTFNDVIHGLCKAGRIHEAAKLHDRMLLRDFTADALIQGYLMHGLCRMGKVDEARAM 327
Query: 659 LGHLPNAQT--FHSMVTGYAAIGGKYTEVTEL 688
L +PN T +++++ GY + G++ E +L
Sbjct: 328 LSKIPNPNTVLYNTLINGY-VVSGRFEEAKDL 358
>gi|225465635|ref|XP_002270253.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g08310, mitochondrial [Vitis vinifera]
gi|296085293|emb|CBI29025.3| unnamed protein product [Vitis vinifera]
Length = 854
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 42/180 (23%), Positives = 84/180 (46%), Gaps = 8/180 (4%)
Query: 492 GHVITLCI----SLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLR 547
GHV+++ + G +D+A +L++ M G+R + + L+ ++ +R + L +
Sbjct: 268 GHVLSILVLTFSKCGEVDKAFELIERMEDLGIRLNEKTFCVLIHGFVRQSRVDKALQLFK 327
Query: 548 DARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQN 607
+ +G D S Y+AL+ +K+ ALHL EMKE I + ++L K A
Sbjct: 328 KMQKSGFAPDVSVYDALIGGLCAKKEIEKALHLLSEMKELGI----DPDIQILSKLIAYC 383
Query: 608 HEAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQT 667
E + +L++E E + + +N+V++ + + A L+ M + N +
Sbjct: 384 SEEVDIYRLIEERLEDLDTEAMLLLYNSVLNGLVNGKSVDKAYYLLRAMTGDNYTDNFEV 443
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 57/281 (20%), Positives = 128/281 (45%), Gaps = 34/281 (12%)
Query: 432 MLQKQVELITTEHGILQPTEKIYIKLVKAFLEAGKTKELTHFLIKA-----EKENLQVSH 486
++++++E + TE +L +Y ++ + GK+ + ++L++A +N +V+
Sbjct: 392 LIEERLEDLDTEAMLL-----LYNSVLNGLVN-GKSVDKAYYLLRAMTGDNYTDNFEVNK 445
Query: 487 ----------DDAALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEA 536
D + VI + G LD A L +M G + + +Y +L+ +
Sbjct: 446 FFMVKEMVRPDTTSFSIVIDGLCNTGKLDLALSLFRDMVRVGCKQNVLLYNNLIDKLSNS 505
Query: 537 NRPREVTALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQ- 595
NR E LL++ + +G + + ++ ++D GAL + +EM+ GH+
Sbjct: 506 NRLEECYLLLKEMKGSGFRPTQFTHNSIFGCLCRREDVTGALDMVREMR-----VHGHEP 560
Query: 596 ---EFEMLVKG-CAQNHEAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEK 651
+ +LVK C + A L + V+EG D + ++ I F K + + A +
Sbjct: 561 WIKHYTLLVKQLCKRKRSAEACNFLAEMVREGFLPD--IVAYSAAIDGFVKIKAVDQALE 618
Query: 652 ALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEM 692
+ + + G+ P+ +++++ G+ + + +E ++ EM
Sbjct: 619 IFRDICARGYCPDVVAYNTLINGFCKV-KRVSEAHDILDEM 658
Score = 40.8 bits (94), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 43/193 (22%), Positives = 72/193 (37%), Gaps = 5/193 (2%)
Query: 507 AHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQ 566
A D++ EM + G Y L+K + R E L + G D Y A +
Sbjct: 546 ALDMVREMRVHGHEPWIKHYTLLVKQLCKRKRSAEACNFLAEMVREGFLPDIVAYSAAID 605
Query: 567 SKIVQKDTPGALHLFKEM-KESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQR 625
+ K AL +F+++ P + L+ G + +L E+
Sbjct: 606 GFVKIKAVDQALEIFRDICARGYCPDV--VAYNTLINGFCKVKRVSEAHDILDEMVAKGL 663
Query: 626 IDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEV 685
+ V +N +I +CK + A L RM PN T+ +++ G G+ +
Sbjct: 664 VP-SVVTYNLLIDGWCKNGDIDQAFHCLSRMVGKEREPNVITYTTLIDGLCN-AGRPDDA 721
Query: 686 TELWGEMKSFASS 698
LW EM+ S
Sbjct: 722 IHLWNEMRGKGCS 734
>gi|222637622|gb|EEE67754.1| hypothetical protein OsJ_25461 [Oryza sativa Japonica Group]
Length = 350
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 73/155 (47%), Gaps = 8/155 (5%)
Query: 609 EAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTF 668
E+ L+A++L+ + V D+ +IH + K++L+Q AE A M+S G LP Q
Sbjct: 50 ESPLLAEVLEHALLEDSFEANVRDYTKLIHIYGKQKLLQKAEDAFHAMKSRG-LPCDQVM 108
Query: 669 HSMVTGYAAIGGKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVV 728
+ + + G T E++ E+ + D+ + S++ ++R +A +++
Sbjct: 109 LTALMDMYSKAGDLTRAKEIFNEIGLLG----LPMDKRVYGSMIMAYIRADMLDKAEDMI 164
Query: 729 AMMEEGKMFIDKYKYRTLFLKYHKTLYKGKTPKFQ 763
+ M + ++ K Y+ L Y YKG + Q
Sbjct: 165 SEMGDQQIVAGKEVYKALLRAYS---YKGDSEGAQ 196
>gi|218200200|gb|EEC82627.1| hypothetical protein OsI_27214 [Oryza sativa Indica Group]
Length = 347
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 73/155 (47%), Gaps = 8/155 (5%)
Query: 609 EAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTF 668
E+ L+A++L+ + V D+ +IH + K++L+Q AE A M+S G LP Q
Sbjct: 50 ESPLLAEVLEHALLEDSFEANVRDYTKLIHIYGKQKLLQKAEDAFHAMKSRG-LPCDQVM 108
Query: 669 HSMVTGYAAIGGKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVV 728
+ + + G T E++ E+ + D+ + S++ ++R +A +++
Sbjct: 109 LTALMDMYSKAGDLTRAKEIFNEIGLLG----LPMDKRVYGSMIMAYIRADMLDKAEDMI 164
Query: 729 AMMEEGKMFIDKYKYRTLFLKYHKTLYKGKTPKFQ 763
+ M + ++ K Y+ L Y YKG + Q
Sbjct: 165 SEMGDQQIVAGKEVYKALLRAYS---YKGDSEGAQ 196
>gi|242052075|ref|XP_002455183.1| hypothetical protein SORBIDRAFT_03g005716 [Sorghum bicolor]
gi|241927158|gb|EES00303.1| hypothetical protein SORBIDRAFT_03g005716 [Sorghum bicolor]
Length = 892
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 57/251 (22%), Positives = 96/251 (38%), Gaps = 42/251 (16%)
Query: 502 GWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCY 561
G +D A + D M G+R + Y SL+ Y + + + LL + G+ A+ Y
Sbjct: 384 GMMDDALCMFDRMREKGIRVTVYPYNSLINGYCQHDNFHQARGLLNEMVEKGLAPSAASY 443
Query: 562 EALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVK 621
L+ + D A+ L +EM A+N +G
Sbjct: 444 SPLIAGLCRKGDLASAMELHREM--------------------ARNGVSG---------- 473
Query: 622 EGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGK 681
V+ + +I FCK M +A + +M +PN TF+ M+ GY + G
Sbjct: 474 -------NVYTFTTLISGFCKDGNMDEAARLFDKMIDSSVVPNEVTFNVMIEGYCRV-GN 525
Query: 682 YTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFIDKY 741
+ +L+ +M T N+ L SVL G +A E V +E + ++ +
Sbjct: 526 VRKAFQLYDQMVD-RGLTPDNYTYRSLISVL-CLTLGAM--KAKEFVDDLENNCVVLNSF 581
Query: 742 KYRTLFLKYHK 752
TL + K
Sbjct: 582 SLTTLMYGFCK 592
Score = 42.7 bits (99), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 63/330 (19%), Positives = 130/330 (39%), Gaps = 33/330 (10%)
Query: 449 PTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVIT-LCISLGWLDQA 507
P E + +++ + G ++ F + + + ++ D+ +I+ LC++LG + +A
Sbjct: 508 PNEVTFNVMIEGYCRVGNVRK--AFQLYDQMVDRGLTPDNYTYRSLISVLCLTLGAM-KA 564
Query: 508 HDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQS 567
+ +D++ V +S +L+ + + R E + + R+ G++LD + ++ +
Sbjct: 565 KEFVDDLENNCVVLNSFSLTTLMYGFCKEGRLTETYHIWDEMRARGVKLDLISFTVIVYA 624
Query: 568 KIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRID 627
+ D LF+EMKE + F + E + A +
Sbjct: 625 ALKLHDGEKISVLFREMKEKGVKPD--NVFHTCMIDVHSKEENIVQALNCWDKMIADGCS 682
Query: 628 CGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIG----GKYT 683
V + +I+ CK + A+ + M LPN+ T++ + A G K
Sbjct: 683 PNVVTYTVLINHLCKSGYLSSAQILCEEMLVGRFLPNSFTYNCFLDFLANEGELEKAKVL 742
Query: 684 EVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFIDKYKY 743
T L G A++ + N +++ F + G A +++ E F D Y
Sbjct: 743 HATILEG---CLANTVTFN-------TLIKGFCKAGQIQGAIDLMQNNTESGFFPDCISY 792
Query: 744 RTL-------------FLKYHKTLYKGKTP 760
T+ F +++ LYKG P
Sbjct: 793 STIINELCKVGDINKAFQLWNEMLYKGLKP 822
>gi|224077264|ref|XP_002305195.1| predicted protein [Populus trichocarpa]
gi|222848159|gb|EEE85706.1| predicted protein [Populus trichocarpa]
Length = 556
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 74/315 (23%), Positives = 131/315 (41%), Gaps = 45/315 (14%)
Query: 419 EAEVKRVLQTLL--GMLQKQVELITTEHGI-LQPTEKIYIKLVKAFLEAGKTKELTHFLI 475
EA ++ ++ L G LQ V ++ HG P + LV LE G+ + L
Sbjct: 233 EATIESMISALCKEGKLQTIVNMLDKIHGKRCSPVVIVNTCLVFRILEEGRVEPGLALLK 292
Query: 476 KAEKENLQVSHDDAALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIE 535
++N+ + D A ++ + LG L+ A + +EM G A+S VY S + AY +
Sbjct: 293 MMLRKNMIL--DTVAYSLIVYAKVKLGNLNSAMQVYEEMLKRGFNANSFVYTSFIGAYCK 350
Query: 536 ANRPREVTALLRDARSAGIQLDASCYEALLQS---------------KIVQKDTPGALHL 580
R E LL++ + G++ + LL+ K+++ +L
Sbjct: 351 EERIEEANQLLQEMENMGLKPYGDTFNFLLEGCAKAGRVEETLSYCKKMMEMGHVPSLSA 410
Query: 581 FKEM-----KESKIPRSGHQ--------------EFEMLVKGCAQNHEAGLMAKLLQEVK 621
F EM + + R+ + L+ G A+N++ M KL E+
Sbjct: 411 FNEMVGKLCRIEDVTRANEMLTNLLDEGFLADEITYSNLISGYAKNNQIQEMLKLYYEM- 469
Query: 622 EGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRM--RSLGHLPNAQTFHSMVTGYAAIG 679
E + + G+ + ++I C +++AEK L+ M RSL P + +++ Y G
Sbjct: 470 EYRSLSPGLMGFTSLIKGLCNCGKLEEAEKYLRIMIGRSLN--PREDVYEALIKVYFEKG 527
Query: 680 GKYTEVTELWGEMKS 694
K L+ EM S
Sbjct: 528 DK-RRALNLYNEMVS 541
>gi|297851460|ref|XP_002893611.1| hypothetical protein ARALYDRAFT_336125 [Arabidopsis lyrata subsp.
lyrata]
gi|297339453|gb|EFH69870.1| hypothetical protein ARALYDRAFT_336125 [Arabidopsis lyrata subsp.
lyrata]
Length = 814
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 54/248 (21%), Positives = 112/248 (45%), Gaps = 9/248 (3%)
Query: 435 KQVELITTEHGILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHV 494
++V ++ GI + T + +++++ ++ AG+ ++ L ++ V +
Sbjct: 230 RRVLVLMKRRGIYR-TPEAFLRVMVSYSRAGQLRDALKVLTLMQRAG--VEPNLLICNTT 286
Query: 495 ITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGI 554
I + + L++A L+ M + G+ + Y +++ Y + +R E LL D S G
Sbjct: 287 IDVFVRANRLEKALRFLERMQVVGIVPNVVTYNCMIRGYCDLHRVEEAIELLDDMPSKGC 346
Query: 555 QLDASCYEALLQSKIVQKDTPGALHLFKEM-KESKIPRSGHQEFEMLVKGCAQNHEAGLM 613
D Y ++ +K L K+M KE + R + L+ ++ A
Sbjct: 347 LPDKVSYYTIMGYLCKEKRIVEVRDLMKKMAKEHGLVRD-QVTYNTLIHMLTKHDHADEA 405
Query: 614 AKLLQEVKE-GQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHL-PNAQTFHSM 671
L++ +E G RID ++ ++H CK+ M +A+ + M S GH P+ T+ ++
Sbjct: 406 LWFLKDAEEKGFRID--KVGYSAIVHALCKEGRMSEAKDLINEMLSKGHCPPDVVTYTAV 463
Query: 672 VTGYAAIG 679
V G+ +G
Sbjct: 464 VNGFCRLG 471
Score = 43.9 bits (102), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 60/265 (22%), Positives = 108/265 (40%), Gaps = 40/265 (15%)
Query: 508 HDLLDEM-HLAGVRAS-SSVYASLLKAYIEANRPREVTALLRDARSAGIQL--------- 556
H L+ E+ L G+R+S + + ++ + + +P +V A+LR + L
Sbjct: 144 HPLVREIGRLIGLRSSWNPKHEGQMRNLLRSLKPSQVCAVLRSQDDERVALKFFYWADRQ 203
Query: 557 -----DASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAG 611
D Y ++L+ K GA + MK I R+ ++V AG
Sbjct: 204 WRYRHDPMVYYSMLEVLSKTKMCQGARRVLVLMKRRGIYRTPEAFLRVMV----SYSRAG 259
Query: 612 LMAKLLQEVKEGQR--IDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFH 669
+ L+ + QR ++ + N I F + ++ A + L+RM+ +G +PN T++
Sbjct: 260 QLRDALKVLTLMQRAGVEPNLLICNTTIDVFVRANRLEKALRFLERMQVVGIVPNVVTYN 319
Query: 670 SMVTGYAAIGGKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVV- 728
M+ GY + + E EL +M S L D V Y + G+ + +V
Sbjct: 320 CMIRGYCDL-HRVEEAIELLDDMPSKGC---------LPDKVSYYTIM-GYLCKEKRIVE 368
Query: 729 ------AMMEEGKMFIDKYKYRTLF 747
M +E + D+ Y TL
Sbjct: 369 VRDLMKKMAKEHGLVRDQVTYNTLI 393
Score = 41.2 bits (95), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 55/246 (22%), Positives = 99/246 (40%), Gaps = 18/246 (7%)
Query: 454 YIKLVKAFLEAGKTKELTHFLIKAEKENLQVSH---DDAALGHVITLCISLGWLDQAHDL 510
Y +V A + G+ E + E L H D V+ LG +D+A L
Sbjct: 424 YSAIVHALCKEGRMSEAKDLI----NEMLSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKL 479
Query: 511 LDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIV 570
L MH G + ++ Y +LL + E ++ + ++ Y L+
Sbjct: 480 LQIMHTHGYKPNTVSYTALLNGLCRTGKSLEAREMMNMSEEQWWSPNSITYSVLMHGLRK 539
Query: 571 QKDTPGALHLFKEMK-ESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQE-VKEGQRIDC 628
+ A + +EM + P G E +L++ ++ K ++E + +G I+
Sbjct: 540 EGKLSEACDVVREMVLKGFFP--GPVEINLLLQSLCRDGRTHEARKFMEECLNKGCAIN- 596
Query: 629 GVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIG--GKYTEVT 686
V ++ VIH FC+ + A L M + + T+ ++V A+G G+ E T
Sbjct: 597 -VVNFTTVIHGFCQNDELDAALSVLDDMYLINKHADVFTYTTLVD---ALGKKGRIAEAT 652
Query: 687 ELWGEM 692
EL +M
Sbjct: 653 ELMKKM 658
>gi|215794293|gb|ACJ70132.1| restorer-of-fertility [Brassica napus]
Length = 667
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 45/199 (22%), Positives = 86/199 (43%), Gaps = 12/199 (6%)
Query: 504 LDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEA 563
+D LL EM G+ A++ Y +L+ + + LL++ S+G+ +
Sbjct: 404 VDDGMKLLHEMSRRGLVANTITYTTLIHGFCQLGNLNAALDLLQEMISSGVCPNVVTCNT 463
Query: 564 LLQSKIVQKDTPGALHLFKEMKESKIPRSGH----------QEFEMLVKGCAQNHEAGLM 613
LL AL +FK M++SK+ Q + +L+ G +
Sbjct: 464 LLDGLCNNGKLKDALEMFKVMQKSKMDLDASHPFNDVEPDVQTYNILICGLINEGKFSEA 523
Query: 614 AKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVT 673
+L +E+ + + +N+VI CK+ + +A + M S G P+ TF +++
Sbjct: 524 EELYEEMPHRGLVPDTI-TYNSVIDGLCKQSRLDEATQMFDSMGSKGFSPDVVTFTTLIN 582
Query: 674 GYAAIGGKYTEVTELWGEM 692
GY + G+ + E++ EM
Sbjct: 583 GYCKV-GRVGDGLEVFCEM 600
Score = 49.3 bits (116), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 38/167 (22%), Positives = 71/167 (42%), Gaps = 2/167 (1%)
Query: 526 YASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMK 585
+ +L+ R E ALL G+Q + Y ++ DT AL+L ++M+
Sbjct: 180 FTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKME 239
Query: 586 ESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRL 645
E + + ++ G ++ L E++E + I + +N +I+ FC
Sbjct: 240 EVSRIKPNVVIYSAIIDGLWKDGRQTDAQNLFSEMQE-KGISPNLFTYNCMINGFCSSGR 298
Query: 646 MQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEM 692
+A++ L+ M P+ TF ++ GK+ E EL+ EM
Sbjct: 299 WSEAQRLLREMFERKMSPDVVTFSVLINALVK-EGKFFEAEELYNEM 344
Score = 42.4 bits (98), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 45/235 (19%), Positives = 94/235 (40%), Gaps = 5/235 (2%)
Query: 444 HGILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGW 503
H I +P + L+ G+ E L + ++ LQ + G ++ +G
Sbjct: 170 HQICKPNVIAFTTLMNGLCREGRVVEAVALLDRMVEDGLQ--PNQITYGTIVDGMCKMGD 227
Query: 504 LDQAHDLLDEMH-LAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYE 562
A +LL +M ++ ++ + +Y++++ + R + L + + GI + Y
Sbjct: 228 TVSALNLLRKMEEVSRIKPNVVIYSAIIDGLWKDGRQTDAQNLFSEMQEKGISPNLFTYN 287
Query: 563 ALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKE 622
++ A L +EM E K+ F +L+ + + +L E+
Sbjct: 288 CMINGFCSSGRWSEAQRLLREMFERKMSPD-VVTFSVLINALVKEGKFFEAEELYNEMLP 346
Query: 623 GQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAA 677
+ I +N++I F K+ + AE+ M + G P+ TF ++ GY
Sbjct: 347 -RGIIPNTITYNSMIDGFSKQNRLDAAERMFYLMATKGCSPDVITFSILIDGYCG 400
Score = 40.8 bits (94), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 47/231 (20%), Positives = 94/231 (40%), Gaps = 9/231 (3%)
Query: 447 LQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQ 506
P+ + L+ + E HF + K N+ A ++ G + +
Sbjct: 142 FHPSLVTFSTLLHGLCVEDRVSEALHFFHQICKPNV------IAFTTLMNGLCREGRVVE 195
Query: 507 AHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAG-IQLDASCYEALL 565
A LLD M G++ + Y +++ + LLR I+ + Y A++
Sbjct: 196 AVALLDRMVEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEEVSRIKPNVVIYSAII 255
Query: 566 QSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQR 625
A +LF EM+E I + + ++ G + +LL+E+ E ++
Sbjct: 256 DGLWKDGRQTDAQNLFSEMQEKGISPNLFT-YNCMINGFCSSGRWSEAQRLLREMFE-RK 313
Query: 626 IDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYA 676
+ V ++ +I+ K+ +AE+ M G +PN T++SM+ G++
Sbjct: 314 MSPDVVTFSVLINALVKEGKFFEAEELYNEMLPRGIIPNTITYNSMIDGFS 364
>gi|357127701|ref|XP_003565517.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g25630-like [Brachypodium distachyon]
Length = 579
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 73/352 (20%), Positives = 142/352 (40%), Gaps = 28/352 (7%)
Query: 328 FYNCLLSCHLKFGDLNSASKMVLEMLQRAKEARNSLAAAMLPFNAVGVNNRTPSEQNVNC 387
F+N L++ ++ G + A+ + +M + R +++ G+ R Q +
Sbjct: 98 FFNALINAFVEAGRMGEATSVFWKMSRHHPGCRPTVSTFNTLIKGFGIAGRPEESQRI-- 155
Query: 388 TNSVDLENSGIIENHILSYEDFTKDRKFVALEAEVKRVLQT--LLGMLQKQVELITTEHG 445
DL + + N T V + +R+ Q ++G ++
Sbjct: 156 ---FDLMTAWVRPN-------LTTYNILVKAWCDQRRMEQAWAVVGRMRP---------A 196
Query: 446 ILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLD 505
++P Y L A+ + +T ++ E ++ + G ++ G L+
Sbjct: 197 AVEPDVVTYNTLASAYAKNDETWRAEELVV-VEMARARLRTSERTWGIIVGGYCREGRLE 255
Query: 506 QAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALL 565
+A + +M AGV + V+ +LLK +++AN +L GI+ D Y L
Sbjct: 256 EALRCVRQMKDAGVGPNVIVFNTLLKGFLDANDAAAAADVLGLMEQFGIKPDIVTYSHQL 315
Query: 566 QSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKE-GQ 624
+ +F M E+ I Q + +L KG + + G +LLQ++ G
Sbjct: 316 NALSSLGHMARCAKVFDRMLEAGI-EPDPQVYSILAKGYVRAQQPGKAEELLQQMGRLGV 374
Query: 625 RIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYA 676
R + V + VI +C M +A + +MR G PN +TF +++ GY+
Sbjct: 375 RPN--VVTFTTVISGWCSVADMDNATRVYDKMRGAGVRPNLRTFETLIWGYS 424
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 62/320 (19%), Positives = 118/320 (36%), Gaps = 42/320 (13%)
Query: 439 LITTEHGILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLC 498
L E L+P + L+ AF+EAG+ E T K +
Sbjct: 84 LADIEAAGLRPDPIFFNALINAFVEAGRMGEATSVFWKMSR------------------- 124
Query: 499 ISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDA 558
H G R + S + +L+K + A RP E + D +A ++ +
Sbjct: 125 ----------------HHPGCRPTVSTFNTLIKGFGIAGRPEESQRIF-DLMTAWVRPNL 167
Query: 559 SCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQ 618
+ Y L+++ Q+ A + M+ + + + L A+N E +L+
Sbjct: 168 TTYNILVKAWCDQRRMEQAWAVVGRMRPAAV-EPDVVTYNTLASAYAKNDETWRAEELVV 226
Query: 619 EVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAI 678
R+ W ++ +C++ +++A + +++M+ G PN F++++ G+
Sbjct: 227 VEMARARLRTSERTWGIIVGGYCREGRLEEALRCVRQMKDAGVGPNVIVFNTLLKGFLDA 286
Query: 679 GGKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFI 738
L G M+ F + L+++ G AR +V M E +
Sbjct: 287 NDAAAAADVL-GLMEQFGIKPDIVTYSHQLNALSSL----GHMARCAKVFDRMLEAGIEP 341
Query: 739 DKYKYRTLFLKYHKTLYKGK 758
D Y L Y + GK
Sbjct: 342 DPQVYSILAKGYVRAQQPGK 361
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/174 (22%), Positives = 74/174 (42%), Gaps = 3/174 (1%)
Query: 449 PTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQAH 508
P ++ L+K FL+A L E + D H + SLG + +
Sbjct: 271 PNVIVFNTLLKGFLDANDAAAAADVL--GLMEQFGIKPDIVTYSHQLNALSSLGHMARCA 328
Query: 509 DLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSK 568
+ D M AG+ VY+ L K Y+ A +P + LL+ G++ + + ++
Sbjct: 329 KVFDRMLEAGIEPDPQVYSILAKGYVRAQQPGKAEELLQQMGRLGVRPNVVTFTTVISGW 388
Query: 569 IVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKE 622
D A ++ +M+ + + R + FE L+ G ++ + K+LQ +K+
Sbjct: 389 CSVADMDNATRVYDKMRGAGV-RPNLRTFETLIWGYSEQKQPWKAEKVLQMMKD 441
Score = 44.7 bits (104), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 59/122 (48%), Gaps = 9/122 (7%)
Query: 443 EHGILQPTEKIYIKLVKAFLEA---GKTKELTHFLIKAEKENLQVSHDDAALGHVITLCI 499
E GI +P ++Y L K ++ A GK +EL + + L V + VI+
Sbjct: 336 EAGI-EPDPQVYSILAKGYVRAQQPGKAEELLQQMGR-----LGVRPNVVTFTTVISGWC 389
Query: 500 SLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDAS 559
S+ +D A + D+M AGVR + + +L+ Y E +P + +L+ + AG++ S
Sbjct: 390 SVADMDNATRVYDKMRGAGVRPNLRTFETLIWGYSEQKQPWKAEKVLQMMKDAGVRPKQS 449
Query: 560 CY 561
Y
Sbjct: 450 TY 451
>gi|302792250|ref|XP_002977891.1| hypothetical protein SELMODRAFT_107819 [Selaginella moellendorffii]
gi|300154594|gb|EFJ21229.1| hypothetical protein SELMODRAFT_107819 [Selaginella moellendorffii]
Length = 385
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 51/234 (21%), Positives = 97/234 (41%), Gaps = 18/234 (7%)
Query: 506 QAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALL 565
+A+DLL+EM +G Y +L+ + ++ + + + + G + D Y L+
Sbjct: 72 EAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTYSCLI 131
Query: 566 QSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKE-GQ 624
+ A+ LF M +S + L+ G + + LL+ + E G
Sbjct: 132 DGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAETGS 191
Query: 625 RIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTE 684
D V + +++ FCK + DA L +M G PN TF S++ G + ++
Sbjct: 192 SPD--VVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPNVVTFTSLMDGLCR-ENRLSD 248
Query: 685 VTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFI 738
+ GEM+ + S ++ +LD + R N+ +EE + F+
Sbjct: 249 AVHILGEMRRKSCSPTVYTYNTILDG----------YCRVNQ----LEEARKFM 288
>gi|302822703|ref|XP_002993008.1| hypothetical protein SELMODRAFT_136281 [Selaginella moellendorffii]
gi|300139208|gb|EFJ05954.1| hypothetical protein SELMODRAFT_136281 [Selaginella moellendorffii]
Length = 431
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 73/335 (21%), Positives = 137/335 (40%), Gaps = 51/335 (15%)
Query: 443 EHGILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLG 502
+HG +P Y ++++ ++AG FL K K L+ D L +V+ LG
Sbjct: 42 KHGS-KPNAYTYKCVIQSLVKAGNVVLAMDFLDKMIKTGLE---PDTLLYNVVL--DGLG 95
Query: 503 ---WLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQ---- 555
+D+A L M G A YA L+++ R E T L + G
Sbjct: 96 KANMIDEACKLFASMKSMGCPADDYTYAILIRSLGRCKRDEEATLLFDEMEERGCTPSAP 155
Query: 556 -----LDASCYEALLQS------KIVQKD--------------------TPGALHLFKEM 584
+D C ++S K++ K+ T A +F+ M
Sbjct: 156 AYTNVIDIYCKAGRIESAMVVLKKMLDKNLAPDDYTLNSLITAVSRTGRTELACEIFERM 215
Query: 585 KESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKR 644
K+S + + F ++ C + + GL + + E+ E + I +N +I+ + +
Sbjct: 216 KKSGVAVN-TVSFNAMLDCCGKAGKVGLAYQFMDEM-EARGIKPNSITFNTLINCLGRAK 273
Query: 645 LMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEMKSFASSTSMNFD 704
+A K L+ MRS G P+ T+ M+ +A G + E++G+M+ S ++
Sbjct: 274 YASEAYKVLQEMRSAGLTPDVFTYTCMIEAFAK-AGNMGKAFEMFGDMEKAGCSANVVTY 332
Query: 705 EELLDSVLYTFVRGGFFARANEVVAMMEEGKMFID 739
L+D++ V+ G + A ++ M++ + D
Sbjct: 333 NLLIDAL----VKAGRYQDARDIYFDMKKKGILPD 363
>gi|297736854|emb|CBI26055.3| unnamed protein product [Vitis vinifera]
Length = 653
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 62/255 (24%), Positives = 116/255 (45%), Gaps = 14/255 (5%)
Query: 444 HGILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGW 503
HG + P + Y L+ ++AG E T+ L A KE V A + C S G
Sbjct: 328 HGFI-PDARSYSILIHGLVKAGLANE-TYELFYAMKEQGCVLDTHAYNAVIDGFCKS-GK 384
Query: 504 LDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEA 563
+++A+ LL+EM + G + Y S++ + +R E L +A+S GI+L+ Y +
Sbjct: 385 VNKAYQLLEEMKVKGHPPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGIKLNVVVYSS 444
Query: 564 LLQ--SKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVK 621
L+ K+ + D A + +E+ + + + + + L+ + E Q +K
Sbjct: 445 LIDGFGKVGRIDE--AYLIMEELMQKGLTPNVYT-WNCLLDALVKAEEINEALICFQSMK 501
Query: 622 EGQRIDCGVHD--WNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIG 679
+ + C + ++ +I+ C+ R A + M+ LG PN T+ +M++G A
Sbjct: 502 D---LKCPPNQITYSILINGLCRVRKFNKAFVFWQEMQKLGLKPNTITYTTMISGLAK-A 557
Query: 680 GKYTEVTELWGEMKS 694
G E + L+ K+
Sbjct: 558 GNILEASGLFSRFKA 572
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/238 (20%), Positives = 106/238 (44%), Gaps = 11/238 (4%)
Query: 443 EHGILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQV-SHDDAAL--GHVITLCI 499
E G + T Y ++ F ++GK + L E ++V H + G VI
Sbjct: 362 EQGCVLDTHA-YNAVIDGFCKSGKVNKAYQLL-----EEMKVKGHPPTVVTYGSVIDGLA 415
Query: 500 SLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDAS 559
+ LD+A+ L +E G++ + VY+SL+ + + R E ++ + G+ +
Sbjct: 416 KIDRLDEAYMLFEEAKSNGIKLNVVVYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVY 475
Query: 560 CYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQE 619
+ LL + + ++ AL F+ MK+ K P + + +L+ G + + QE
Sbjct: 476 TWNCLLDALVKAEEINEALICFQSMKDLKCPPN-QITYSILINGLCRVRKFNKAFVFWQE 534
Query: 620 VKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAA 677
+++ + + +I K + +A R ++ G +P++ ++++M+ G ++
Sbjct: 535 MQK-LGLKPNTITYTTMISGLAKAGNILEASGLFSRFKANGGIPDSASYNAMIEGLSS 591
Score = 42.7 bits (99), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 42/179 (23%), Positives = 76/179 (42%), Gaps = 9/179 (5%)
Query: 504 LDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEA 563
LD+A +L +++ + Y +++ Y A + E LL ++ G Y
Sbjct: 71 LDEAVELFEQLEQNRKVPCAYAYNTMIMGYGSAGKFDEAYGLLERQKAKGSIPSVIAYNC 130
Query: 564 LLQSKIVQKDTPGALHLFKEMKESKIPR--SGHQEFEMLVKGCAQNHEAGLMAKL-LQEV 620
+L ++ AL +F+EMK +P + + +ML + E L A L +++
Sbjct: 131 ILTCLGKKRRVEEALRIFEEMKRDAVPNVPTYNILIDMLCR------EGKLNAALEIRDD 184
Query: 621 KEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIG 679
E + V N +I CK + +++A + M PNA TF S++ G G
Sbjct: 185 MERAGLFPNVLTVNIMIDRLCKAQKLEEACSIFEGMDDKVCTPNAVTFSSLIDGLGKCG 243
Score = 42.4 bits (98), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 55/282 (19%), Positives = 98/282 (34%), Gaps = 38/282 (13%)
Query: 449 PTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQAH 508
P +Y L+++F + G+ KE H + K E + S D + + G ++
Sbjct: 262 PGAIVYTSLIRSFFKCGR-KEDGHKIYK-EMVHTGCSPDLTLINTYMDCVFKAGETEKGR 319
Query: 509 DLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSK 568
L E++ G + Y+ L+ ++A E L + G LD Y A++
Sbjct: 320 ALFREINAHGFIPDARSYSILIHGLVKAGLANETYELFYAMKEQGCVLDTHAYNAVIDGF 379
Query: 569 IVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEG----- 623
A L +EMK P + + ++ G A+ L +E K
Sbjct: 380 CKSGKVNKAYQLLEEMKVKGHPPT-VVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGIKLN 438
Query: 624 --------------QRID---------------CGVHDWNNVIHFFCKKRLMQDAEKALK 654
RID V+ WN ++ K + +A +
Sbjct: 439 VVVYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEINEALICFQ 498
Query: 655 RMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEMKSFA 696
M+ L PN T+ ++ G + K+ + W EM+
Sbjct: 499 SMKDLKCPPNQITYSILINGLCRV-RKFNKAFVFWQEMQKLG 539
>gi|242067353|ref|XP_002448953.1| hypothetical protein SORBIDRAFT_05g002330 [Sorghum bicolor]
gi|241934796|gb|EES07941.1| hypothetical protein SORBIDRAFT_05g002330 [Sorghum bicolor]
Length = 734
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 69/331 (20%), Positives = 126/331 (38%), Gaps = 21/331 (6%)
Query: 423 KRVLQTLLGMLQKQVELITTEHGILQPTEKIYIKLVKAFLEAGKTKELTHFL-IKAEKEN 481
KRV + + +LQ+ EL T P Y L+K F + +E L + A
Sbjct: 147 KRVGEAMDVLLQRMPELGCT------PDTVSYSILLKGFCNENRAEEALELLRMMANDHG 200
Query: 482 LQVSHDDAALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPRE 541
+ VI D+A + +M GV+ ++ Y L+ Y+ + +E
Sbjct: 201 RSCPPNVVTYTTVIDGLCKAQLFDRAEGVFQQMIDNGVKPNNDTYNCLIHGYLSIGKWKE 260
Query: 542 VTALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLV 601
V +L + G++ D Y +LL + +H F ++ H F +
Sbjct: 261 VVQMLEKMSARGLKPDCYTYGSLLNYLCALSE----MHSFLDLMVENGLSPDHHIFNIFF 316
Query: 602 KGCAQNHEAGLMAKLLQEVKEGQR--IDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSL 659
A+ G++ K + + ++ + V ++ +I CK + DAE +M +
Sbjct: 317 SAYAK---CGMIDKAMDIFNKMRQHGLSPNVVNYGALIDALCKLGRVDDAEVKFNQMINE 373
Query: 660 GHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGG 719
G PN F+S+V G + K+ EL EM + F ++++ G
Sbjct: 374 GVTPNIVVFNSLVYGLCTV-DKWERAEELVYEMLDQGICPNAVF----FNTLICNLCNVG 428
Query: 720 FFARANEVVAMMEEGKMFIDKYKYRTLFLKY 750
++ +ME + D + Y L Y
Sbjct: 429 RVMEGRRLIDLMEHVGVRPDAFSYTPLISGY 459
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 82/202 (40%), Gaps = 6/202 (2%)
Query: 494 VITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAG 553
+ LC ++G + + L+D M GVR + Y L+ Y A R E + S G
Sbjct: 421 ICNLC-NVGRVMEGRRLIDLMEHVGVRPDAFSYTPLISGYCLAGRTDEAEKVFDGMVSIG 479
Query: 554 IQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLM 613
+ Y LL A LF+EM + G + ++ G Q
Sbjct: 480 LSPTEVTYNTLLHGYCSASRIDDAYCLFREMLRKGVT-PGVVTYNTILHGLFQTKRFSEA 538
Query: 614 AKL-LQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMV 672
+L L + G + C ++ +N +++ CK + +A K + + S G N TF M+
Sbjct: 539 KELYLNMINSGTK--CDIYTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFTIMI 596
Query: 673 TGYAAIGGKYTEVTELWGEMKS 694
G GG+ + +L+ + +
Sbjct: 597 -GALLKGGRKEDAMDLFAAIPA 617
Score = 43.9 bits (102), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 57/271 (21%), Positives = 106/271 (39%), Gaps = 16/271 (5%)
Query: 431 GMLQKQVELITTEHGILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAA 490
G+ Q+ ++ +G+ +P Y L+ +L GK KE+ L K L+ D
Sbjct: 228 GVFQQMID-----NGV-KPNNDTYNCLIHGYLSIGKWKEVVQMLEKMSARGLK--PDCYT 279
Query: 491 LGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDAR 550
G ++ L L + H LD M G+ ++ AY + + + R
Sbjct: 280 YGSLLNY---LCALSEMHSFLDLMVENGLSPDHHIFNIFFSAYAKCGMIDKAMDIFNKMR 336
Query: 551 SAGIQLDASCYEALLQSKIVQKDTPGALHLFKEM-KESKIPRSGHQEFEMLVKGCAQNHE 609
G+ + Y AL+ + A F +M E P F LV G +
Sbjct: 337 QHGLSPNVVNYGALIDALCKLGRVDDAEVKFNQMINEGVTPNI--VVFNSLVYGLCTVDK 394
Query: 610 AGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFH 669
+L+ E+ + Q I +N +I C + + + + M +G P+A ++
Sbjct: 395 WERAEELVYEMLD-QGICPNAVFFNTLICNLCNVGRVMEGRRLIDLMEHVGVRPDAFSYT 453
Query: 670 SMVTGYAAIGGKYTEVTELWGEMKSFASSTS 700
+++GY + G+ E +++ M S S +
Sbjct: 454 PLISGY-CLAGRTDEAEKVFDGMVSIGLSPT 483
>gi|242058841|ref|XP_002458566.1| hypothetical protein SORBIDRAFT_03g035845 [Sorghum bicolor]
gi|241930541|gb|EES03686.1| hypothetical protein SORBIDRAFT_03g035845 [Sorghum bicolor]
Length = 796
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 99/231 (42%), Gaps = 25/231 (10%)
Query: 496 TLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQ 555
T C +LG +++ LLD+M G++ Y +++ Y +A + L + G++
Sbjct: 536 TYC-NLGKVEEILHLLDQMKSEGLKPDIVTYGTIIDGYCKAKDMHKANEYLTELMKNGLR 594
Query: 556 LDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAK 615
+A Y AL+ + A+ + MK + I + ++ C A
Sbjct: 595 PNAVIYNALIGGYGRNGNISDAIGILDTMKYNGIQPTPVTYNSLMYWMC--------HAG 646
Query: 616 LLQEVKEG------QRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFH 669
L++EVK + I+ GV + +I FCK + +A K M S G PN T+
Sbjct: 647 LVEEVKAVFAQCIVKDIELGVIGYTIIIQGFCKIGKIDEAVMYFKEMHSRGIPPNKMTYT 706
Query: 670 SMVTGYAAIGGKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGF 720
+++ Y+ G K E ++L+ EM S + DSV Y + GF
Sbjct: 707 TLMFAYSKSGNK-EEASKLFDEMVSLGI---------VPDSVSYNTLISGF 747
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 68/316 (21%), Positives = 123/316 (38%), Gaps = 68/316 (21%)
Query: 255 TFNIALAGCLLFETTRKAEQLLDIMPRIGVKADSNLLIIMAHIYERNGRREELRKLQRHI 314
T+NI + GC +A QL D M + G K D I H Y G+ EE+ L +
Sbjct: 494 TYNIMIQGCCKASKMDEAIQLRDDMIKRGFKPDLFTFNIFLHTYCNLGKVEEILHLLDQM 553
Query: 315 DEAVNLSDIQFRQFYNCLLSCHLKFGDLNSASKMVLEMLQRAKEARNSLAAAMLPFNA-V 373
DI Y ++ + K D++ A++ + E++ +N L + +NA +
Sbjct: 554 KSEGLKPDI---VTYGTIIDGYCKAKDMHKANEYLTELM------KNGLRPNAVIYNALI 604
Query: 374 GVNNRTPSEQNVNCTNSVDLENSGIIENHILSYEDFTKDRKFVALEAEVKRVLQTLLGML 433
G R N N ++++ GI++
Sbjct: 605 GGYGR-----NGNISDAI-----GILD--------------------------------- 621
Query: 434 QKQVELITTEHGILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGH 493
T ++ +QPT Y L+ AG +E+ + +++++ +G+
Sbjct: 622 -------TMKYNGIQPTPVTYNSLMYWMCHAGLVEEVKAVFAQCIVKDIEL----GVIGY 670
Query: 494 VITL---CISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDAR 550
I + C +G +D+A EMH G+ + Y +L+ AY ++ E + L +
Sbjct: 671 TIIIQGFC-KIGKIDEAVMYFKEMHSRGIPPNKMTYTTLMFAYSKSGNKEEASKLFDEMV 729
Query: 551 SAGIQLDASCYEALLQ 566
S GI D+ Y L+
Sbjct: 730 SLGIVPDSVSYNTLIS 745
Score = 46.6 bits (109), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 67/160 (41%), Gaps = 3/160 (1%)
Query: 502 GWLDQAHDLLDEMHLAGVRASS-SVYASLLKAYIEANRPREVTALLRDARSAGIQLDASC 560
G LD A + EM A Y +++KA A A+L + R +GIQ
Sbjct: 189 GQLDVARKVFGEMRDGKTVAPDVHTYTAMIKALCRAGEIDAAFAMLAELRRSGIQPTVVT 248
Query: 561 YEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEV 620
Y L+ + A L M E ++ R F +L+ G A+ + G + +LQE+
Sbjct: 249 YNVLMDALCKSGRVEEAFRLKGRMVEGRV-RPSIVTFGILISGLARGQQFGEVGAVLQEM 307
Query: 621 KEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLG 660
+G I +N +I + C+K +A K M S G
Sbjct: 308 -QGFGITPNEVIYNEMIGWHCRKGHCSEALKLFDEMVSKG 346
>gi|15240649|ref|NP_199839.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170477|sp|Q9FGR7.1|PP426_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g50280, chloroplastic; AltName: Full=Protein EMBRYO
DEFECTIVE 1006; Flags: Precursor
gi|9759030|dbj|BAB09399.1| unnamed protein product [Arabidopsis thaliana]
gi|332008538|gb|AED95921.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 723
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 76/344 (22%), Positives = 140/344 (40%), Gaps = 52/344 (15%)
Query: 442 TEHGILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISL 501
+E G+ + ++ ++ LVK+F + G +E +I+ E E + + ++
Sbjct: 336 SEKGV-KWSQDVFGGLVKSFCDEGLKEE--ALVIQTEMEKKGIRSNTIVYNTLMDAYNKS 392
Query: 502 GWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCY 561
+++ L EM G++ S++ Y L+ AY +P V LLR+ G++ + Y
Sbjct: 393 NHIEEVEGLFTEMRDKGLKPSAATYNILMDAYARRMQPDIVETLLREMEDLGLEPNVKSY 452
Query: 562 EALLQS-KIVQKDTPGALHLFKEMKESKIPRSGHQ-------------------EFEMLV 601
L+ + +K + A F MK+ + S H FE +
Sbjct: 453 TCLISAYGRTKKMSDMAADAFLRMKKVGLKPSSHSYTALIHAYSVSGWHEKAYASFEEMC 512
Query: 602 K-GCAQNHE-----------AGLMAKL-------LQEVKEGQRIDCGVHDWNNVIHFFCK 642
K G + E +G KL L+E +G RI +N ++ F K
Sbjct: 513 KEGIKPSVETYTSVLDAFRRSGDTGKLMEIWKLMLREKIKGTRIT-----YNTLLDGFAK 567
Query: 643 KRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEMKSFASSTSMN 702
+ L +A + +G P+ T++ ++ YA GG+ ++ +L EM ++ ++
Sbjct: 568 QGLYIEARDVVSEFSKMGLQPSVMTYNMLMNAYAR-GGQDAKLPQLLKEM----AALNLK 622
Query: 703 FDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFIDKYKYRTL 746
D +++Y FVR F RA MM + D Y L
Sbjct: 623 PDSITYSTMIYAFVRVRDFKRAFFYHKMMVKSGQVPDPRSYEKL 666
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 60/280 (21%), Positives = 118/280 (42%), Gaps = 19/280 (6%)
Query: 480 ENLQVSHDDAALGHVITLCISLGW-LDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANR 538
+ + V D+ +IT G + ++ ++M GV+ S V+ L+K++ +
Sbjct: 300 DKINVYPDNVTCAILITTLRKAGRSAKEVWEIFEKMSEKGVKWSQDVFGGLVKSFCDEGL 359
Query: 539 PREVTALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFE 598
E + + GI+ + Y L+ + LF EM++ + S +
Sbjct: 360 KEEALVIQTEMEKKGIRSNTIVYNTLMDAYNKSNHIEEVEGLFTEMRDKGLKPSAAT-YN 418
Query: 599 MLVKGCAQNHEAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQD-AEKALKRMR 657
+L+ A+ + ++ LL+E+ E ++ V + +I + + + M D A A RM+
Sbjct: 419 ILMDAYARRMQPDIVETLLREM-EDLGLEPNVKSYTCLISAYGRTKKMSDMAADAFLRMK 477
Query: 658 SLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEMKSFASSTSM-----NFDEELLDSVL 712
+G P++ ++ +++ Y+ G W E K++AS M E SVL
Sbjct: 478 KVGLKPSSHSYTALIHAYSVSG---------WHE-KAYASFEEMCKEGIKPSVETYTSVL 527
Query: 713 YTFVRGGFFARANEVVAMMEEGKMFIDKYKYRTLFLKYHK 752
F R G + E+ +M K+ + Y TL + K
Sbjct: 528 DAFRRSGDTGKLMEIWKLMLREKIKGTRITYNTLLDGFAK 567
>gi|357485461|ref|XP_003613018.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355514353|gb|AES95976.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 894
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 67/288 (23%), Positives = 119/288 (41%), Gaps = 22/288 (7%)
Query: 448 QPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQA 507
QP Y +KA+ G+ E ++K ++E + + D ++ +G LD A
Sbjct: 607 QPNVVTYTAFIKAYCRQGRLLEAEEMVVKIKEEGILL--DSFIYDVLVNAYGCIGQLDSA 664
Query: 508 HDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQS 567
+L M G S Y+ LLK I +E L D S I +D + +
Sbjct: 665 FGVLIRMFDTGCEPSRQTYSILLKHLIFEKYNKEGMGL--DLNSTNISVDNANIWKIADF 722
Query: 568 KIVQKDTPGALHLFKEMKESK-IPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKE-GQR 625
+I+ LF++M E +P + L+KG + L +L +KE G
Sbjct: 723 EIITM-------LFEKMVEQGCVPNV--NTYSKLIKGLCKVEHLSLAFRLFNHMKESGIS 773
Query: 626 IDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEV 685
+H N+++ CK + ++A + L M HL + +++ +V G G +
Sbjct: 774 PSENIH--NSLLSSCCKLGMHEEALRLLDSMMEYNHLAHLESYKLLVCGLFEQGNQ---- 827
Query: 686 TELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEE 733
E E+ S N+DE + +L VR G+ +++ +ME+
Sbjct: 828 -EKAEEIFRSLLSCGYNYDEVVWKVLLDGLVRKGYVDECSQLRDIMEK 874
Score = 46.6 bits (109), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 77/174 (44%), Gaps = 4/174 (2%)
Query: 504 LDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEA 563
L A+ + + M G + Y +L+ + E + E L + G D Y
Sbjct: 241 LGDAYKVFEIMPQEGCLRNEVSYTNLIHGFCEVGKIDEALELFFQMKEDGCFPDVPTYTV 300
Query: 564 LLQSKI-VQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKE 622
L+ + V K+T AL F+EM E+ I + + ++ C M L +++
Sbjct: 301 LVAAFCEVGKETE-ALKFFEEMVENGIEPNVYTYTVLIDYFCKVGKMDEGMEMLSTMLEK 359
Query: 623 GQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYA 676
G + V +N +I +CK+ +M+DA L M+ PN++T++ ++ G+
Sbjct: 360 G--LVSSVVPFNALIDGYCKRGMMEDAICVLDSMKLNKVCPNSRTYNELICGFC 411
Score = 44.7 bits (104), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 65/317 (20%), Positives = 117/317 (36%), Gaps = 42/317 (13%)
Query: 449 PTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQAH 508
P Y LV AF E GK E F + + ++ + + +I +G +D+
Sbjct: 293 PDVPTYTVLVAAFCEVGKETEALKFFEEMVENGIEPNVYTYTV--LIDYFCKVGKMDEGM 350
Query: 509 DLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSK 568
++L M G+ +S + +L+ Y + + +L + + ++ Y L+
Sbjct: 351 EMLSTMLEKGLVSSVVPFNALIDGYCKRGMMEDAICVLDSMKLNKVCPNSRTYNELICGF 410
Query: 569 IVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQ-EVKEG---- 623
+K A+ L +M E+K+ + L+ G + +L +K+G
Sbjct: 411 CRKKSMDRAMALLNKMYENKL-SPNLVTYNTLIHGLCKARVVDSAWRLHHLMIKDGFVPD 469
Query: 624 QRIDCGVHD-----------------------------WNNVIHFFCKKRLMQDAEKALK 654
QR C D + +I +CK DA K
Sbjct: 470 QRTFCAFIDCLCKMGKVEQAHQVFESLKEKHAEANEFLYTALIDGYCKAEKFSDAHLLFK 529
Query: 655 RMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYT 714
RM G PN+ TF+ ++ G GK + L M F + +++ L++ +L
Sbjct: 530 RMLFEGCFPNSITFNVLLDGLRK-EGKVEDAMSLVDVMGKFDAKPTVHTYTILIEEIL-- 586
Query: 715 FVRGGFFARANEVVAMM 731
R F RAN + M
Sbjct: 587 --RESDFDRANMFLDQM 601
>gi|242058007|ref|XP_002458149.1| hypothetical protein SORBIDRAFT_03g027690 [Sorghum bicolor]
gi|241930124|gb|EES03269.1| hypothetical protein SORBIDRAFT_03g027690 [Sorghum bicolor]
Length = 795
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 73/172 (42%), Gaps = 2/172 (1%)
Query: 504 LDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEA 563
D+A+ LL+EMH GV Y L+ +R EV +L+ S G Y +
Sbjct: 484 FDKAYALLNEMHQNGVSCGEYTYNILINGLCMVDRVCEVDEMLKRFVSEGFVPTTMTYNS 543
Query: 564 LLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEG 623
++ + AL ++++M E I + + G + + L KLL ++
Sbjct: 544 IINGFVKAGMMGSALAMYRQMCEKGI-TPNIVTYTSFIDGYCRTNCCDLAVKLLIYMR-C 601
Query: 624 QRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGY 675
I + +N I+ FCK+ M A L + G PN ++S VTGY
Sbjct: 602 NGIHPDIAAYNAFINMFCKQGNMSHALHFLVLLLKDGLTPNVTVYNSFVTGY 653
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 65/294 (22%), Positives = 116/294 (39%), Gaps = 16/294 (5%)
Query: 488 DAALGHVITLCISLGWLDQAH------DLLDEMHLAGVRASSSVYASLLKAYIEANRPRE 541
D + V T + WL + H +L D+M AGV+ S SLL Y E E
Sbjct: 392 DTGVPDVFTYGCLIHWLSKHHKVHEAVNLWDKMKEAGVKPSIVTCHSLLLGYCEKGCMDE 451
Query: 542 VTALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLV 601
L + G + Y L++ I +K A L EM ++ + G + +L+
Sbjct: 452 ALKLYSEMPGKGFPPNEVTYTTLMKGYIKKKAFDKAYALLNEMHQNGV-SCGEYTYNILI 510
Query: 602 KG-CAQNHEAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLG 660
G C + + L + V EG +N++I+ F K +M A ++M G
Sbjct: 511 NGLCMVDRVCEVDEMLKRFVSEG--FVPTTMTYNSIINGFVKAGMMGSALAMYRQMCEKG 568
Query: 661 HLPNAQTFHSMVTGYAAIGGKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGF 720
PN T+ S + GY T +L ++ + ++ D ++ + F + G
Sbjct: 569 ITPNIVTYTSFIDGYCR-----TNCCDLAVKLLIYMRCNGIHPDIAAYNAFINMFCKQGN 623
Query: 721 FARANEVVAMMEEGKMFIDKYKYRTLFLKYHKTLYKGKTPKFQTEAQLKKREAA 774
+ A + ++ + + + Y + Y + KF + +K+R AA
Sbjct: 624 MSHALHFLVLLLKDGLTPNVTVYNSFVTGYKNLKMMAEASKFY-YSMIKQRIAA 676
Score = 47.0 bits (110), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 66/307 (21%), Positives = 119/307 (38%), Gaps = 46/307 (14%)
Query: 478 EKENLQVSHDDAALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEAN 537
E V D+ IT L D+A +L +M AG++ Y S++ ++
Sbjct: 213 EMAGAGVKPDERVYAITITGLCKLRDADRAVQVLGKMREAGLKPRDFTYNSVVDVLVKVG 272
Query: 538 RPREVTALLRDAR--SAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQ 595
R E L+D + G ++D L+Q + + AL LF E + + +
Sbjct: 273 RMDEALR-LKDQMLLATGKKMDVFLATTLMQGYCLHGEIGKALDLFDEAVRDGVTPT-NV 330
Query: 596 EFEMLVKGC----------------------AQNHEAGLMAKLLQEVKEGQR-------- 625
+ +L+KGC +E L+ K L K+ +
Sbjct: 331 TYTVLIKGCDAEGMTDETYKLCRQMIEQGLLPSTYEFNLVIKGLLRNKQWEDAIALFDLV 390
Query: 626 IDCGVHD---WNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKY 682
+D GV D + +IH+ K + +A +M+ G P+ T HS++ GY G
Sbjct: 391 VDTGVPDVFTYGCLIHWLSKHHKVHEAVNLWDKMKEAGVKPSIVTCHSLLLGYCE-KGCM 449
Query: 683 TEVTELWGEM--KSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFIDK 740
E +L+ EM K F +E +++ +++ F +A ++ M + + +
Sbjct: 450 DEALKLYSEMPGKGFPP------NEVTYTTLMKGYIKKKAFDKAYALLNEMHQNGVSCGE 503
Query: 741 YKYRTLF 747
Y Y L
Sbjct: 504 YTYNILI 510
>gi|145524846|ref|XP_001448245.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124415789|emb|CAK80848.1| unnamed protein product [Paramecium tetraurelia]
Length = 967
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 57/259 (22%), Positives = 99/259 (38%), Gaps = 43/259 (16%)
Query: 474 LIKAEKENLQVSHDDAALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAY 533
L++ +E Q D+ +I C+ + + L EM + SS Y L+KAY
Sbjct: 506 LLEQIQETGQFKPDEILYNSLIDACVKFNEIQKGMQLFKEMKNKSIEPSSVTYGILIKAY 565
Query: 534 IEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSG 593
+ N D GA +F+EMK+ KIP +
Sbjct: 566 GKMN-----------------------------------DLNGAFRMFEEMKQKKIPIND 590
Query: 594 HQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKAL 653
+ LV C +N + ++++K Q + + +I FCK ++A K
Sbjct: 591 -VTYGCLVDACVRNDRLDQALQFIEQMK-SQNLPINTVLYTTIIKGFCKLNQTEEAMKYF 648
Query: 654 KRMR-SLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEMKSFASSTSMNFDEELLDSVL 712
M+ + PN T++S++ G G + +L+ E+ +++ D ++L
Sbjct: 649 SLMKQNQRTYPNLITYNSLLDGLVK-NGLMNQADKLFQEL----VESTIKPDLITFSTLL 703
Query: 713 YTFVRGGFFARANEVVAMM 731
R G R NE V M
Sbjct: 704 KGHCRRGNMKRLNETVQTM 722
Score = 42.4 bits (98), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 43/187 (22%), Positives = 84/187 (44%), Gaps = 20/187 (10%)
Query: 421 EVKRVLQTLLGMLQKQVELITTEHGILQPTEKIYIKLVKAFLEAGKTKELT-HFLIKAEK 479
E+++ +Q M K +E + +GIL +KA+ GK +L F + E
Sbjct: 535 EIQKGMQLFKEMKNKSIEPSSVTYGIL----------IKAY---GKMNDLNGAFRMFEEM 581
Query: 480 ENLQVSHDDAALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRP 539
+ ++ +D G ++ C+ LDQA +++M + ++ +Y +++K + + N+
Sbjct: 582 KQKKIPINDVTYGCLVDACVRNDRLDQALQFIEQMKSQNLPINTVLYTTIIKGFCKLNQT 641
Query: 540 REVT---ALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQE 596
E +L++ + L Y +LL + A LF+E+ ES I +
Sbjct: 642 EEAMKYFSLMKQNQRTYPNLIT--YNSLLDGLVKNGLMNQADKLFQELVESTI-KPDLIT 698
Query: 597 FEMLVKG 603
F L+KG
Sbjct: 699 FSTLLKG 705
Score = 39.3 bits (90), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 53/284 (18%), Positives = 104/284 (36%), Gaps = 5/284 (1%)
Query: 472 HFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLK 531
+FL+ ++N ++ + +I D+A + + L + + Y +L+
Sbjct: 286 NFLLTFMRDNAKIQPTIVTINTMIDQYFKNNQKDKAWKTFENLKLTSTKPDNFTYTTLIN 345
Query: 532 AYIEANRP--REVTALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKI 589
++ R L + + Q D Y LL + I D L EMK+S+
Sbjct: 346 GLKNSDNMDLRLAFQLFEEYKQYN-QPDQIIYNCLLDACINAGDLNRGFQLLNEMKQSQS 404
Query: 590 PRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDA 649
+ + L+KGC + L +E+K+ I +N+++ K M A
Sbjct: 405 IQLDEITYNTLIKGCGRKKRLNEAISLFEEMKQI-GIKPNRISFNSLLDSCVKCNKMNVA 463
Query: 650 EKALKRMR-SLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEMKSFASSTSMNFDEELL 708
+ + MR G P+ T+ +V G E+ ++ + DE L
Sbjct: 464 WRYFEEMRKQYGIFPDNFTYSILVNGIKTNHSNRDELLRAITLLEQIQETGQFKPDEILY 523
Query: 709 DSVLYTFVRGGFFARANEVVAMMEEGKMFIDKYKYRTLFLKYHK 752
+S++ V+ + ++ M+ + Y L Y K
Sbjct: 524 NSLIDACVKFNEIQKGMQLFKEMKNKSIEPSSVTYGILIKAYGK 567
>gi|414882130|tpg|DAA59261.1| TPA: hypothetical protein ZEAMMB73_845952 [Zea mays]
Length = 1603
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 82/361 (22%), Positives = 147/361 (40%), Gaps = 37/361 (10%)
Query: 329 YNCLLSCHLKFGDLNSASKMVLEMLQRAKEAR----NSLAAAMLPFNAVGVNNRTPSEQN 384
YN +++ + GDL A+++V E ++ +K+A N L +L A G + Q
Sbjct: 1159 YNVVITGLTRKGDLEEAAELV-EGMRLSKKASSFTYNPLITGLL---ARGCVKKVYDLQ- 1213
Query: 385 VNCTNSVDLENSGIIENHILSYEDFTKDRKFVALEAEVKRVLQTLLGMLQK-QVELITTE 443
+++EN GI+ V A + +LQ+ G+++ QV+
Sbjct: 1214 ------LEMENEGIMPT-------------VVTYNAMIHGLLQS--GLVEAAQVKFAEMR 1252
Query: 444 HGILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGW 503
L P Y L+ + +AG KE L+ + ++ +I LG
Sbjct: 1253 AMGLLPDVITYNSLLNGYCKAGNLKEA--LLLFGDLRRAGLAPTVLTYNILIDGYCRLGD 1310
Query: 504 LDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEA 563
L++A L +EM G + Y L+K + + S G+Q D Y
Sbjct: 1311 LEEARILKEEMGEQGCLPNVCTYTILMKGSLNVRSLAMAREFFDEMLSKGLQPDCFAYNT 1370
Query: 564 LLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKG-CAQNHEAGLMAKLLQEVKE 622
+ ++++ D A L + + I S + +L+ G C + ++ V
Sbjct: 1371 RICAELILGDIARAFELREVLMLEGI-SSDTVTYNILIHGLCKTGNLKDAKELQMKMVSN 1429
Query: 623 GQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKY 682
G + DC + +IH C++ L+++A K M S G LP+A TF ++ Y G Y
Sbjct: 1430 GLQPDCIT--YTCLIHAHCERGLLREARKIFNNMISDGLLPSAVTFTVIIHAYCRRGNLY 1487
Query: 683 T 683
+
Sbjct: 1488 S 1488
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 88/186 (47%), Gaps = 10/186 (5%)
Query: 512 DEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRD--ARSAGIQLDASCYEALLQSKI 569
+EM G+ S Y +LL ++++ R +V LL++ R +G + Y ++
Sbjct: 1108 EEMLELGIEPSIVTYNTLLDSFLKEGRKDKVAMLLKEMETRGSGCLPNDVTYNVVITGLT 1167
Query: 570 VQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKL--LQEVKEGQRID 627
+ D A L + M+ SK ++ + L+ G G + K+ LQ E + I
Sbjct: 1168 RKGDLEEAAELVEGMRLSK--KASSFTYNPLITGLLAR---GCVKKVYDLQLEMENEGIM 1222
Query: 628 CGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTE 687
V +N +IH + L++ A+ MR++G LP+ T++S++ GY G E
Sbjct: 1223 PTVVTYNAMIHGLLQSGLVEAAQVKFAEMRAMGLLPDVITYNSLLNGYCK-AGNLKEALL 1281
Query: 688 LWGEMK 693
L+G+++
Sbjct: 1282 LFGDLR 1287
Score = 43.5 bits (101), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 51/237 (21%), Positives = 96/237 (40%), Gaps = 46/237 (19%)
Query: 447 LQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQ 506
++P+ Y L+ +FL+ G+ ++ L + E +D VIT G L++
Sbjct: 1115 IEPSIVTYNTLLDSFLKEGRKDKVAMLLKEMETRGSGCLPNDVTYNVVITGLTRKGDLEE 1174
Query: 507 AHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEA--- 563
A +L++ M L+ +ASS Y L+ + ++V L + + GI Y A
Sbjct: 1175 AAELVEGMRLSK-KASSFTYNPLITGLLARGCVKKVYDLQLEMENEGIMPTVVTYNAMIH 1233
Query: 564 -LLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKE 622
LLQS +V+ A F EM+ GL+ ++
Sbjct: 1234 GLLQSGLVE----AAQVKFAEMR-----------------------AMGLLPDVIT---- 1262
Query: 623 GQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIG 679
+N++++ +CK +++A +R G P T++ ++ GY +G
Sbjct: 1263 ----------YNSLLNGYCKAGNLKEALLLFGDLRRAGLAPTVLTYNILIDGYCRLG 1309
>gi|356505993|ref|XP_003521773.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
chloroplastic-like [Glycine max]
Length = 570
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 55/285 (19%), Positives = 113/285 (39%), Gaps = 9/285 (3%)
Query: 448 QPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQA 507
+PT Y L++A L G E L + + NLQ D +I G++D+A
Sbjct: 193 KPTVVTYTILIEATLLQGGIDEAMKLLDEMLEINLQ--PDMFTYNSIIRGMCREGYVDRA 250
Query: 508 HDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQS 567
++ + G Y LL+ + + L+ D + G + + Y L+ S
Sbjct: 251 FQIISSISSKGYAPDVITYNILLRGLLNQGKWEAGYELMSDMVARGCEANVVTYSVLISS 310
Query: 568 KIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRID 627
+ L K+MK+ + G+ ++ C + + L + +G D
Sbjct: 311 VCRDGKVEEGVGLLKDMKKKGLKPDGYCYDPLIAALCKEGRVDLAIEVLDVMISDGCVPD 370
Query: 628 CGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTE 687
+ ++N ++ CK++ +A +++ +G PNA +++SM + + G K +
Sbjct: 371 --IVNYNTILACLCKQKRADEALSIFEKLGEVGCSPNASSYNSMFSALWSTGHKVRALGM 428
Query: 688 LWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMME 732
+ + + + +S++ R G A E++ ME
Sbjct: 429 ILEMLDKGVDPDGITY-----NSLISCLCRDGMVDEAIELLVDME 468
Score = 42.7 bits (99), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 51/251 (20%), Positives = 92/251 (36%), Gaps = 3/251 (1%)
Query: 454 YIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQAHDLLDE 513
Y L+ + GK +E L +K+ L+ D +I G +D A ++LD
Sbjct: 304 YSVLISSVCRDGKVEEGVGLLKDMKKKGLK--PDGYCYDPLIAALCKEGRVDLAIEVLDV 361
Query: 514 MHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQKD 573
M G Y ++L + R E ++ G +AS Y ++ +
Sbjct: 362 MISDGCVPDIVNYNTILACLCKQKRADEALSIFEKLGEVGCSPNASSYNSMFSALWSTGH 421
Query: 574 TPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRIDCGVHDW 633
AL + EM + + G ++ C + L+ E V +
Sbjct: 422 KVRALGMILEMLDKGVDPDGITYNSLISCLCRDGMVDEAIELLVDMEMESSECKPSVVSY 481
Query: 634 NNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEMK 693
N V+ CK + DA + L M G PN T+ ++ G GG + +L +
Sbjct: 482 NIVLLGLCKVSRVSDAIEVLAAMVDKGCRPNETTYTFLIEG-IGFGGCLNDARDLATTLV 540
Query: 694 SFASSTSMNFD 704
+ + + +F+
Sbjct: 541 NMDAISEHSFE 551
>gi|242095042|ref|XP_002438011.1| hypothetical protein SORBIDRAFT_10g006490 [Sorghum bicolor]
gi|241916234|gb|EER89378.1| hypothetical protein SORBIDRAFT_10g006490 [Sorghum bicolor]
Length = 1443
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 52/240 (21%), Positives = 99/240 (41%), Gaps = 48/240 (20%)
Query: 493 HVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSA 552
H+IT + +A + +M G+ AS ++Y S++ Y + P L+ DA +
Sbjct: 680 HLITCLVEAELFSEACQVFCDMQFIGIEASKNIYESIISTYCKLGFPETAHGLMDDALQS 739
Query: 553 GIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGL 612
GI L+ +L +++ + G + L+ Q+ E+LVKG
Sbjct: 740 GIPLN------ILSCRVIIIEAYGNIKLW-------------QQAEILVKG--------- 771
Query: 613 MAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMV 672
+++ ID + WN +IH + + L + A M G LP + + M+
Sbjct: 772 -------LRQASGIDRRI--WNALIHAYAESGLYEKARAVFDNMIKTGPLPTVDSVNGMM 822
Query: 673 TGYAAIGGKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMME 732
+ G+ E+ + GE++ S + +LD+ FA+A +V +M+
Sbjct: 823 RAL-IVDGRLDELYVVVGELQDMDFKISKSTVLLMLDA----------FAKAGDVFEVMK 871
Score = 45.8 bits (107), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 82/421 (19%), Positives = 177/421 (42%), Gaps = 72/421 (17%)
Query: 294 MAHIYERNGRREELRKLQRHI-DEAVNLSDIQFRQFYNCLLSCHLKFGDLNSASKMVLEM 352
M +Y R+GR ++ R+L + D ++ + F N L++ K G L A+ + L++
Sbjct: 227 MMGVYARSGRFDDARQLLDTMHDRGIDPDLVSF----NTLINARSKSGCL--AAGVALDL 280
Query: 353 LQRAKEARNSLAAAMLPFNAVGVNNRTPSEQNVNCTNSVDLENSGIIENHILSYE---DF 409
L +++ L ++ +N + C+ S +LE++ + +++ E D
Sbjct: 281 LFEVRQS--GLRPDVITYNTL----------ISACSQSSNLEDAVTVFEEMIASECRPDL 328
Query: 410 TKDRKFVALEAEVKRV--LQTLLGMLQKQVELITTEHGILQPTEKIYIKLVKAFLEAGKT 467
V++ + + L G L E G + P Y L+ AF + G
Sbjct: 329 WTYNAMVSVHGRCGKAEEAERLFGEL--------VEKGFM-PDAVTYNSLLYAFAKEGNV 379
Query: 468 KELTHF---LIKAEKENLQVSHD------------DAALG------------HVITLCI- 499
++ H L+KA + +++++ D A+G +T +
Sbjct: 380 DKVEHTCEELVKAGFKKNEITYNTMIHMYGKMGRLDLAVGLYDEMRAVGCTPDAVTYTVM 439
Query: 500 --SLGWLD---QAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGI 554
SLG +D +A +L++M AG++ + +++L+ AY + R + ++G+
Sbjct: 440 IDSLGKMDKIAEAGKVLEDMADAGLKPTLVAFSALICAYAKGGRRADAEKTFDCMIASGV 499
Query: 555 QLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMA 614
+ D Y +L +T L L++ M R +++L+ A+ + +
Sbjct: 500 KPDRLAYLVMLDVFARSGETEKMLRLYRTMMNDNY-RPDDDMYQVLLVALAKEDKCEEIE 558
Query: 615 KLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTG 674
+++Q+++ ++ GV + K R + K LK+ G+ P+A++ S++
Sbjct: 559 EIIQDMELLCQMSLGV-----ISTILIKARCVSQGGKLLKKACLQGYKPDAKSLWSIMNA 613
Query: 675 Y 675
Y
Sbjct: 614 Y 614
Score = 41.2 bits (95), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 44/190 (23%), Positives = 85/190 (44%), Gaps = 10/190 (5%)
Query: 497 LCISLGWLDQA-HDLLDE---MHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSA 552
+ + LG L +A D + E + AG A+ V+ +++ Y + R + LL
Sbjct: 191 VAVVLGVLGRARQDSIAEEVFLRFAGEGATVQVFNAMMGVYARSGRFDDARQLLDTMHDR 250
Query: 553 GIQLDASCYEALL--QSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEA 610
GI D + L+ +SK AL L E+++S + R + L+ C+Q+
Sbjct: 251 GIDPDLVSFNTLINARSKSGCLAAGVALDLLFEVRQSGL-RPDVITYNTLISACSQSSNL 309
Query: 611 GLMAKLLQEVKEGQ-RIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFH 669
+ +E+ + R D ++ +H C K ++AE+ + G +P+A T++
Sbjct: 310 EDAVTVFEEMIASECRPDLWTYNAMVSVHGRCGK--AEEAERLFGELVEKGFMPDAVTYN 367
Query: 670 SMVTGYAAIG 679
S++ +A G
Sbjct: 368 SLLYAFAKEG 377
>gi|334187332|ref|NP_001190970.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332661695|gb|AEE87095.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 510
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 64/318 (20%), Positives = 135/318 (42%), Gaps = 32/318 (10%)
Query: 449 PTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCI----SLGWL 504
P +Y KL+ + G+T+ + +L +E +N D + +IT + L
Sbjct: 131 PDNGVYSKLISVMGKKGQTR-MAMWLF-SEMKNSGCRPDASVYNALITAHLHTRDKAKAL 188
Query: 505 DQAHDLLDEMH-LAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEA 563
++ LD+M + + + Y LL+A+ ++ + +V AL +D + + D +
Sbjct: 189 EKVRGYLDKMKGIERCQPNVVTYNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYTFNG 248
Query: 564 LLQSKIVQKDTPGALHLFKEMKESKIPRSGHQE-------FEMLVKGCAQNHEAGLMAKL 616
++ D G + KEM E+ + R E F +L+ + E M +
Sbjct: 249 VM-------DAYGKNGMIKEM-EAVLTRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQT 300
Query: 617 LQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYA 676
+ + + + +N++I + K R++ AE K+M + ++P+ T+ M+ Y
Sbjct: 301 FKSLMRSKEKPT-LPTFNSMIINYGKARMIDKAEWVFKKMNDMNYIPSFITYECMIMMYG 359
Query: 677 AIG--GKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEG 734
G + E+ E GE ++++N ++L + R G + A+++
Sbjct: 360 YCGSVSRAREIFEEVGESDRVLKASTLN-------AMLEVYCRNGLYIEADKLFHNASAF 412
Query: 735 KMFIDKYKYRTLFLKYHK 752
++ D Y+ L+ Y K
Sbjct: 413 RVHPDASTYKFLYKAYTK 430
>gi|297746120|emb|CBI16176.3| unnamed protein product [Vitis vinifera]
Length = 819
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 62/283 (21%), Positives = 118/283 (41%), Gaps = 10/283 (3%)
Query: 415 FVALEAEVKRVLQTLL--GMLQKQVELI--TTEHGILQPTEKIYIKLVKAFLEAGKTKEL 470
FV EA V ++ L G + +L+ + G+ P+ +Y L+ + + GK E
Sbjct: 316 FVPSEAAVSNLVDGLRKKGNIGSAFDLVNKVKKFGV-APSLFVYNALINSMCKDGKLDEA 374
Query: 471 THFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLL 530
+ L +D +I G LD A L +M G++A+ Y+SL+
Sbjct: 375 ESLFNNMGHKGL--FPNDVTYSILIDSFCKRGKLDVALHFLGKMTEVGIKATVYPYSSLI 432
Query: 531 KAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIP 590
+ + + R +L + + G++ + Y +L+ + + A L+ EM I
Sbjct: 433 SGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISGYCKEGELHNAFRLYHEMTGKGIS 492
Query: 591 RSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAE 650
+ + F L+ G + KL E+ E I V +N +I CK+ A
Sbjct: 493 PNTYT-FTALISGLCHANRMAEANKLFGEMVEWNVIPNEV-TYNVLIEGHCKEGNTVRAF 550
Query: 651 KALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEMK 693
+ L M G +P+ T+ +++G + G+ +E E +++
Sbjct: 551 ELLDEMVEKGLVPDTYTYRPLISGLCST-GRVSEAREFMNDLQ 592
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 77/354 (21%), Positives = 131/354 (37%), Gaps = 57/354 (16%)
Query: 444 HGILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVS---HDDAALGHVITLCIS 500
H L P + Y L+ +F + GK HFL K + ++ + + GH
Sbjct: 383 HKGLFPNDVTYSILIDSFCKRGKLDVALHFLGKMTEVGIKATVYPYSSLISGHC-----K 437
Query: 501 LGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASC 560
LG L A L DEM G++ + +Y SL+ Y + L + GI +
Sbjct: 438 LGKLRAAKSLFDEMIANGLKPNVVIYTSLISGYCKEGELHNAFRLYHEMTGKGISPNTYT 497
Query: 561 YEALLQSKIVQKDTPGALHLFKEMKE-SKIPRS--------GH-------QEFEML---- 600
+ AL+ A LF EM E + IP GH + FE+L
Sbjct: 498 FTALISGLCHANRMAEANKLFGEMVEWNVIPNEVTYNVLIEGHCKEGNTVRAFELLDEMV 557
Query: 601 --------------VKGCAQNHEAGLMAKLLQEVK-EGQRID----C--GVHDWNNVIHF 639
+ G + + +++ E Q+++ C V + +I+
Sbjct: 558 EKGLVPDTYTYRPLISGLCSTGRVSEAREFMNDLQGEQQKLNEIEGCLPNVVTYTALING 617
Query: 640 FCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGE-MKSFASS 698
CK LM AE + M + LPN T+ + Y G + +L ++ F ++
Sbjct: 618 LCKIGLMDKAELLCREMLASNSLPNQNTYACFLD-YLTSEGNIEKAIQLHDVLLEGFLAN 676
Query: 699 TSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFIDKYKYRTLFLKYHK 752
T + ++ F + G A EV+ M + + D Y T+ +Y +
Sbjct: 677 TVT------YNILIRGFCKLGRIQEAAEVLVNMIDSGISPDCISYSTIIYEYCR 724
>gi|255549371|ref|XP_002515739.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223545176|gb|EEF46686.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 613
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 56/248 (22%), Positives = 108/248 (43%), Gaps = 20/248 (8%)
Query: 493 HVITLCIS----LGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRD 548
HV T IS LG + +A L DE++ G+ A++ Y +L+ + + L+ +
Sbjct: 321 HVFTSIISWQCKLGNMKRAFALFDELNERGLVANAHTYGALIHGTCNSGQLDAAEMLVNE 380
Query: 549 ARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKG-CAQN 607
+S G+ ++ + L+ + AL + +++ E K + + + G C N
Sbjct: 381 MQSQGLDMNLVIFNTLINGYCKKGMIDEALRM-QDVMEKKGFENDIFTYNTIAGGLCKLN 439
Query: 608 HEAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQT 667
L V++G +D + +I CK+ + +AE+ + M+ G PN T
Sbjct: 440 RHEEAKRWLFTMVEKG--VDPNAVSFTIMIDIHCKEGNLVEAERVFQDMKKKGEKPNVVT 497
Query: 668 FHSMVTGYAAIGGKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGG--FFARAN 725
+++++ GY+ GK E L EM+S ++ D YT + G F +
Sbjct: 498 YNTLIDGYSK-KGKLKEAYRLKDEMESIGMTS---------DIYTYTTLVHGECVFGKVE 547
Query: 726 EVVAMMEE 733
E + ++ E
Sbjct: 548 EALTLLNE 555
Score = 48.1 bits (113), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 77/178 (43%), Gaps = 2/178 (1%)
Query: 502 GWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCY 561
G +++A DL+ EM G++ + Y +L+ AYI+ V +LR + +A+ Y
Sbjct: 229 GRVERAKDLMLEMTGKGIKPNVVTYNTLVNAYIKIMDFEGVNEMLRLMEMDKVVYNAATY 288
Query: 562 EALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVK 621
L++ A +F++M E + H ++ C + A L E+
Sbjct: 289 TLLIEWYGSSGKIAEAEKVFEKMLERGVEADIHVFTSIISWQCKLGNMKRAFA-LFDELN 347
Query: 622 EGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIG 679
E + + H + +IH C + AE + M+S G N F++++ GY G
Sbjct: 348 E-RGLVANAHTYGALIHGTCNSGQLDAAEMLVNEMQSQGLDMNLVIFNTLINGYCKKG 404
>gi|255548994|ref|XP_002515553.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223545497|gb|EEF47002.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 927
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 45/209 (21%), Positives = 95/209 (45%), Gaps = 13/209 (6%)
Query: 491 LGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDAR 550
L ++T + + +A ++ ++M L GV +++A ++ N E +A+
Sbjct: 212 LNFLLTALVKNDMIYEAREVYEKMVLKGVHGDCFTVHIMMRANLKDNNEEEAKKFFLEAK 271
Query: 551 SAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESK-IPRSGHQEFEMLVKGCAQNHE 609
S G++LDA+ Y ++Q+ D A L K+M++ +P G F ++ C +
Sbjct: 272 SRGVKLDAAAYSIVIQAFCKNLDVELACGLLKDMRDKGWVPSEG--TFTSVIGACVKQ-- 327
Query: 610 AGLMAKLLQEVKEGQRIDCGVH----DWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNA 665
G M + L+ + + + CGV ++ +CK+ + A + +M G PN
Sbjct: 328 -GNMVEALR--LKDEMVSCGVQMNVVVATTLVKGYCKQDKLVSALEFFDKMNENGPSPNR 384
Query: 666 QTFHSMVTGYAAIGGKYTEVTELWGEMKS 694
T+ ++ + G + +L+ +MK+
Sbjct: 385 VTYAVLIE-WCCKNGNMAKAYDLYTQMKN 412
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 92/433 (21%), Positives = 169/433 (39%), Gaps = 36/433 (8%)
Query: 251 PNTNTFNIALAGCLLFETTRKAEQLLDIMPRIGVKADSNLLIIMAHIYERNGRREELRKL 310
PN T+ + + C KA L M + ++ + + + REE KL
Sbjct: 382 PNRVTYAVLIEWCCKNGNMAKAYDLYTQMKNKNICPTVFIVNSLIRGFLKVESREEASKL 441
Query: 311 QRHIDEAVNLSDIQFRQFYNCLLSCHLKFGDLNSASKMVLEMLQRAKEARNSLAAAMLPF 370
DEAV DI YN LLS K G ++ A+ + +ML + LA + +
Sbjct: 442 ---FDEAV-ACDIANIFTYNSLLSWLCKEGKMSEATTLWQKMLDKG------LAPTKVSY 491
Query: 371 NAVGVNNRTPSEQNVNCTNSVDLENSGIIENHILSYEDFTKDRKFVALEAEVKRVLQTLL 430
N++ + + ++ + D+ + G+ N +++Y D F + +
Sbjct: 492 NSMILGHCRQGNLDMAASVFSDMLDCGLKPN-VITYS-ILMDGYFK--NGDTEYAFYVFD 547
Query: 431 GMLQKQVELITTEHGILQPTEKIYIKLVKAFLEAGKTKELTHFLIK-AEKENLQVSHDDA 489
M+ + + P++ Y + + G+T E L K EK + V
Sbjct: 548 RMVDENI----------VPSDFTYNIKINGLCKVGRTSEAQDMLKKFVEKGFVPVC---L 594
Query: 490 ALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDA 549
++ I G + A EM +GV + Y +L+ + + N + +
Sbjct: 595 TYNSIMDGFIKEGSVSSALTAYREMCESGVSPNVITYTTLINGFCKNNNTDLALKMRNEM 654
Query: 550 RSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKI-PRSGHQEFEMLVKGCA--Q 606
R+ G++LD + Y AL+ ++D A LF E+ + + P S + L+ G
Sbjct: 655 RNKGLELDIAAYGALIDGFCKKQDIETASWLFSELLDGGLSPNS--VIYNSLISGYRNLN 712
Query: 607 NHEAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQ 666
N EA L LQ+ G+ I C + + +I K+ + A M + G +P+
Sbjct: 713 NMEAALN---LQKRMLGEGISCDLQTYTTLIDGLLKEGRLVLALDLYSEMSAKGIIPDII 769
Query: 667 TFHSMVTGYAAIG 679
+ ++ G G
Sbjct: 770 IYTVLINGLCGKG 782
Score = 49.7 bits (117), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 51/257 (19%), Positives = 104/257 (40%), Gaps = 38/257 (14%)
Query: 457 LVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVI-TLCISLGWLDQAHDLLDEMH 515
+++A L+ +E F ++A+ +++ D AA VI C +L ++ A LL +M
Sbjct: 250 MMRANLKDNNEEEAKKFFLEAKSRGVKL--DAAAYSIVIQAFCKNLD-VELACGLLKDMR 306
Query: 516 LAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQKDTP 575
G S + S++ A ++ E L + S G+Q++ L++ Q
Sbjct: 307 DKGWVPSEGTFTSVIGACVKQGNMVEALRLKDEMVSCGVQMNVVVATTLVKGYCKQDKLV 366
Query: 576 GALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKE------------- 622
AL F +M E+ P + +L++ C +N L ++K
Sbjct: 367 SALEFFDKMNENG-PSPNRVTYAVLIEWCCKNGNMAKAYDLYTQMKNKNICPTVFIVNSL 425
Query: 623 -----------------GQRIDCGVHD---WNNVIHFFCKKRLMQDAEKALKRMRSLGHL 662
+ + C + + +N+++ + CK+ M +A ++M G
Sbjct: 426 IRGFLKVESREEASKLFDEAVACDIANIFTYNSLLSWLCKEGKMSEATTLWQKMLDKGLA 485
Query: 663 PNAQTFHSMVTGYAAIG 679
P +++SM+ G+ G
Sbjct: 486 PTKVSYNSMILGHCRQG 502
>gi|359477281|ref|XP_003631958.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g06920-like [Vitis vinifera]
Length = 898
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 62/255 (24%), Positives = 116/255 (45%), Gaps = 14/255 (5%)
Query: 444 HGILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGW 503
HG + P + Y L+ ++AG E T+ L A KE V A + C S G
Sbjct: 573 HGFI-PDARSYSILIHGLVKAGLANE-TYELFYAMKEQGCVLDTHAYNAVIDGFCKS-GK 629
Query: 504 LDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEA 563
+++A+ LL+EM + G + Y S++ + +R E L +A+S GI+L+ Y +
Sbjct: 630 VNKAYQLLEEMKVKGHPPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGIKLNVVVYSS 689
Query: 564 LLQ--SKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVK 621
L+ K+ + D A + +E+ + + + + + L+ + E Q +K
Sbjct: 690 LIDGFGKVGRIDE--AYLIMEELMQKGLTPNVYT-WNCLLDALVKAEEINEALICFQSMK 746
Query: 622 EGQRIDCGVHD--WNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIG 679
+ + C + ++ +I+ C+ R A + M+ LG PN T+ +M++G A
Sbjct: 747 D---LKCPPNQITYSILINGLCRVRKFNKAFVFWQEMQKLGLKPNTITYTTMISGLAK-A 802
Query: 680 GKYTEVTELWGEMKS 694
G E + L+ K+
Sbjct: 803 GNILEASGLFSRFKA 817
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 47/238 (19%), Positives = 104/238 (43%), Gaps = 11/238 (4%)
Query: 443 EHGILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAAL---GHVITLCI 499
E G + T Y ++ F ++GK + L E ++V + G VI
Sbjct: 607 EQGCVLDTHA-YNAVIDGFCKSGKVNKAYQLL-----EEMKVKGHPPTVVTYGSVIDGLA 660
Query: 500 SLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDAS 559
+ LD+A+ L +E G++ + VY+SL+ + + R E ++ + G+ +
Sbjct: 661 KIDRLDEAYMLFEEAKSNGIKLNVVVYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVY 720
Query: 560 CYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQE 619
+ LL + + ++ AL F+ MK+ K P + +L+ G + + QE
Sbjct: 721 TWNCLLDALVKAEEINEALICFQSMKDLKCP-PNQITYSILINGLCRVRKFNKAFVFWQE 779
Query: 620 VKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAA 677
+++ + + +I K + +A R ++ G +P++ ++++M+ G ++
Sbjct: 780 MQK-LGLKPNTITYTTMISGLAKAGNILEASGLFSRFKANGGIPDSASYNAMIEGLSS 836
Score = 48.1 bits (113), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 55/246 (22%), Positives = 108/246 (43%), Gaps = 7/246 (2%)
Query: 448 QPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQA 507
+P ++ I ++K +A ++ AEK+ +V H A ++ + D
Sbjct: 89 KPLPELVIGVLKRLKDANTA---VNYFQWAEKQTEKV-HCPEAYNSLLMVMARNTEFDHL 144
Query: 508 HDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQS 567
+L+EM L+G SS++ L+ +++ + RE +++ R + S Y L+ +
Sbjct: 145 ERILEEMSLSGFGPSSNISIELVANCVKSRKLREAFDIIQTMRKFKFRPAFSAYTILIGA 204
Query: 568 KIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRID 627
++ L LF +M+E + H F L++ A+ LL E+K +D
Sbjct: 205 LSEVREPDPMLILFHQMQELGYEVNVHL-FTTLIRVFAREGRVDAALSLLDEMKS-NSLD 262
Query: 628 CGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTE 687
+ +N I F K + + K M+S G +P+ T+ SM+ G + E E
Sbjct: 263 ADIVLYNVCIDCFGKAGKVDMSWKFFHEMKSHGLMPDDVTYTSMI-GVLCKANRLDEAVE 321
Query: 688 LWGEMK 693
L+ +++
Sbjct: 322 LFEQLE 327
Score = 47.0 bits (110), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 52/230 (22%), Positives = 93/230 (40%), Gaps = 11/230 (4%)
Query: 453 IYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQAHDLLD 512
+Y + F +AGK F + + L DD +I + LD+A +L +
Sbjct: 267 LYNVCIDCFGKAGKVDMSWKFFHEMKSHGLM--PDDVTYTSMIGVLCKANRLDEAVELFE 324
Query: 513 EMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQK 572
++ + Y +++ Y A + E LL ++ G Y +L ++
Sbjct: 325 QLEQNRKVPCAYAYNTMIMGYGSAGKFDEAYGLLERQKAKGSIPSVIAYNCILTCLGKKR 384
Query: 573 DTPGALHLFKEMKESKIPR--SGHQEFEMLVKGCAQNHEAGLMAKL-LQEVKEGQRIDCG 629
AL +F+EMK +P + + +ML + E L A L +++ E +
Sbjct: 385 RVEEALRIFEEMKRDAVPNVPTYNILIDMLCR------EGKLNAALEIRDDMERAGLFPN 438
Query: 630 VHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIG 679
V N +I CK + +++A + M PNA TF S++ G G
Sbjct: 439 VLTVNIMIDRLCKAQKLEEACSIFEGMDDKVCTPNAVTFSSLIDGLGKCG 488
Score = 45.4 bits (106), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 41/204 (20%), Positives = 85/204 (41%), Gaps = 3/204 (1%)
Query: 498 CISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLD 557
C+ L +A D++ M R + S Y L+ A E P + L + G +++
Sbjct: 170 CVKSRKLREAFDIIQTMRKFKFRPAFSAYTILIGALSEVREPDPMLILFHQMQELGYEVN 229
Query: 558 ASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLL 617
+ L++ + AL L EMK + + + + + + + + + K
Sbjct: 230 VHLFTTLIRVFAREGRVDAALSLLDEMKSNSLD-ADIVLYNVCIDCFGKAGKVDMSWKFF 288
Query: 618 QEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAA 677
E+K + V + ++I CK + +A + +++ +P A +++M+ GY +
Sbjct: 289 HEMKSHGLMPDDV-TYTSMIGVLCKANRLDEAVELFEQLEQNRKVPCAYAYNTMIMGYGS 347
Query: 678 IGGKYTEVTELWGEMKSFASSTSM 701
GK+ E L K+ S S+
Sbjct: 348 -AGKFDEAYGLLERQKAKGSIPSV 370
Score = 42.4 bits (98), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 55/282 (19%), Positives = 98/282 (34%), Gaps = 38/282 (13%)
Query: 449 PTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQAH 508
P +Y L+++F + G+ KE H + K E + S D + + G ++
Sbjct: 507 PGAIVYTSLIRSFFKCGR-KEDGHKIYK-EMVHTGCSPDLTLINTYMDCVFKAGETEKGR 564
Query: 509 DLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSK 568
L E++ G + Y+ L+ ++A E L + G LD Y A++
Sbjct: 565 ALFREINAHGFIPDARSYSILIHGLVKAGLANETYELFYAMKEQGCVLDTHAYNAVIDGF 624
Query: 569 IVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEG----- 623
A L +EMK P + + ++ G A+ L +E K
Sbjct: 625 CKSGKVNKAYQLLEEMKVKGHPPT-VVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGIKLN 683
Query: 624 --------------QRID---------------CGVHDWNNVIHFFCKKRLMQDAEKALK 654
RID V+ WN ++ K + +A +
Sbjct: 684 VVVYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEINEALICFQ 743
Query: 655 RMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEMKSFA 696
M+ L PN T+ ++ G + K+ + W EM+
Sbjct: 744 SMKDLKCPPNQITYSILINGLCRV-RKFNKAFVFWQEMQKLG 784
>gi|224157081|ref|XP_002337799.1| predicted protein [Populus trichocarpa]
gi|222869732|gb|EEF06863.1| predicted protein [Populus trichocarpa]
Length = 367
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 60/286 (20%), Positives = 121/286 (42%), Gaps = 46/286 (16%)
Query: 502 GWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCY 561
G L++A ++++ M G++ S Y +++ + R +L + + G+ D + Y
Sbjct: 15 GLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILIEMLNIGLSPDTTTY 74
Query: 562 EALLQSKIVQKDTPGALHLFKEM-KESKIP-------------RSGHQE----------- 596
LL + + A +F EM ++ +P R+ H +
Sbjct: 75 NTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLMAVFSRNRHLDQALVYFRDMKK 134
Query: 597 ---------FEMLVKGCAQNHEAGLMAKLLQEVKE-GQRIDCGVHDWNNVIHFFCKKRLM 646
+ +L+ G +N K+ E+ E G +D V +N +++ CK++++
Sbjct: 135 FGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLD--VIAYNTILNGLCKEKML 192
Query: 647 QDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEMKSFASSTSMNFDEE 706
DA+K M G LP+ TF +++ G+ G T+ L+G M T N +
Sbjct: 193 TDADKLFDEMVERGALPDFYTFTTLIHGHCQ-DGNMTKALSLFGTM------TQRNIKPD 245
Query: 707 LL--DSVLYTFVRGGFFARANEVVAMMEEGKMFIDKYKYRTLFLKY 750
++ ++++ F + G +A+E+ M K+F + Y L Y
Sbjct: 246 IVAYNTLIDGFCKVGEMEKASELWDGMISRKIFPNHITYGILINAY 291
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 57/245 (23%), Positives = 94/245 (38%), Gaps = 9/245 (3%)
Query: 504 LDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEA 563
LDQA +M G+ + +Y L+ Y E + + G LD Y
Sbjct: 122 LDQALVYFRDMKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYNT 181
Query: 564 LLQSKIVQKDTPGALHLFKEMKE-SKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKE 622
+L +K A LF EM E +P F L+ G Q+ L + +
Sbjct: 182 ILNGLCKEKMLTDADKLFDEMVERGALPD--FYTFTTLIHGHCQDGNMTKALSLFGTMTQ 239
Query: 623 GQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKY 682
+ I + +N +I FCK M+ A + M S PN T+ ++ Y ++ G
Sbjct: 240 -RNIKPDIVAYNTLIDGFCKVGEMEKASELWDGMISRKIFPNHITYGILINAYCSV-GHV 297
Query: 683 TEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFIDKYK 742
+E LW M ++ ++V+ + R G ++A+E + M + D
Sbjct: 298 SEAFRLWDVMIEKGIKPTL----VTCNTVIKGYCRSGDSSKADEFLGRMIAKGVAPDHIS 353
Query: 743 YRTLF 747
Y TL
Sbjct: 354 YNTLI 358
>gi|356561416|ref|XP_003548977.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
mitochondrial-like [Glycine max]
Length = 456
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 79/177 (44%), Gaps = 5/177 (2%)
Query: 497 LCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQL 556
C++ G L A LL+EM L + + YA L+ A + + +E LL + G
Sbjct: 237 FCLA-GQLTGAFSLLNEMILKNINPNVYTYAILIDALCKEGKVKEAKNLLAEMHYRGQPA 295
Query: 557 DASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKL 616
D Y +LL ++ A LF +MKE I + + L+ G + KL
Sbjct: 296 DVVTYTSLLDGFCKNQNLDKATALFMKMKEWGI-QPNKYTYTALIDGLCKGGRLKDAQKL 354
Query: 617 LQE-VKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMV 672
Q+ + +G ID V +N +I CK+ ++ +A +M G +PN TF ++
Sbjct: 355 FQDLLVKGCCID--VCTYNVMIGGLCKEGMLDEALAIKSKMEDNGCIPNVVTFEIII 409
Score = 41.6 bits (96), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 46/246 (18%), Positives = 96/246 (39%), Gaps = 7/246 (2%)
Query: 448 QPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQA 507
QP L+K G+ ++ HF K + Q++ + G ++ +G A
Sbjct: 119 QPNTITLTTLMKGLCLKGEVQKSVHFHDKVVAQGFQMNQ--VSYGTLLNGLCKIGETRCA 176
Query: 508 HDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQS 567
L + + + +Y +++ + E + + GI + Y L+
Sbjct: 177 IKFLRMIEDSSTGLNVVMYNTIIDGLCKDKLVNEAYDFYSEMNARGIFPNVITYTTLIGG 236
Query: 568 KIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVK-EGQRI 626
+ GA L EM I + + + +L+ + + LL E+ GQ
Sbjct: 237 FCLAGQLTGAFSLLNEMILKNINPNVYT-YAILIDALCKEGKVKEAKNLLAEMHYRGQPA 295
Query: 627 DCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVT 686
D V + +++ FCK + + A +M+ G PN T+ +++ G GG+ +
Sbjct: 296 D--VVTYTSLLDGFCKNQNLDKATALFMKMKEWGIQPNKYTYTALIDGLCK-GGRLKDAQ 352
Query: 687 ELWGEM 692
+L+ ++
Sbjct: 353 KLFQDL 358
>gi|299469655|emb|CBN76509.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 787
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 70/295 (23%), Positives = 116/295 (39%), Gaps = 13/295 (4%)
Query: 452 KIYIKLVKAFLEAGKTKELTHFLIKAEKENLQ--VSHDDAALGHVITLCISLGWLDQAHD 509
K Y +KA + L + EK ++ V DA I C +QA
Sbjct: 390 KCYAVTIKACGRGRRWARALELLREMEKNGVEPIVMGYDA----CIAACGDGKQWEQAVA 445
Query: 510 LLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRD-ARSAGIQLDASCYEALLQSK 568
LL EM GV + Y+ + A ++ + + LLR+ + AGI DA CY + +
Sbjct: 446 LLREMPTVGVTPTVVSYSHAIAACGQSYQWKPALELLREMPQEAGINPDAVCYNNCMTAL 505
Query: 569 IVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRIDC 628
AL L +EM +P Q + + +K C E LL+E++ +
Sbjct: 506 GRGLQWEMALTLLREMPSVGLPIKA-QSYTVAIKACGDAGEGKPAVALLREMQAELSVPP 564
Query: 629 GVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTEL 688
V + I K + A + L+ M S+G PN +T+ + +T GK+ E L
Sbjct: 565 NVISYTAAIAACGKGDQWKQALELLREMASMGVSPNDRTYTAAITA-CGNSGKWEEALSL 623
Query: 689 WGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFIDKYKY 743
EM + + ++ + + GG + RA E+ + + D Y
Sbjct: 624 LREMPTMGADPNIAS----YTATIKACGNGGQWERAVELFRELPSAGITADVQAY 674
Score = 47.4 bits (111), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 51/96 (53%)
Query: 494 VITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAG 553
I C + G + A DLL+EM+ GVR ++ + ++A + +R + ++LR AG
Sbjct: 325 AIAACGTGGQSEVAVDLLEEMNALGVRPNTQTCLAAVRAAGDRDRGEQAVSVLRSMSEAG 384
Query: 554 IQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKI 589
+ +A CY +++ + AL L +EM+++ +
Sbjct: 385 VAAEAKCYAVTIKACGRGRRWARALELLREMEKNGV 420
Score = 45.1 bits (105), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 54/131 (41%), Gaps = 1/131 (0%)
Query: 455 IKLVKAFLEAGKTKELTHFL-IKAEKENLQVSHDDAALGHVITLCISLGWLDQAHDLLDE 513
I A GK + L + E ++ VS +D IT C + G ++A LL E
Sbjct: 567 ISYTAAIAACGKGDQWKQALELLREMASMGVSPNDRTYTAAITACGNSGKWEEALSLLRE 626
Query: 514 MHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQKD 573
M G + + Y + +KA + L R+ SAGI D Y A +Q+
Sbjct: 627 MPTMGADPNIASYTATIKACGNGGQWERAVELFRELPSAGITADVQAYNACVQACGNSGA 686
Query: 574 TPGALHLFKEM 584
A+ L +EM
Sbjct: 687 VDQAVELLREM 697
Score = 39.7 bits (91), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 71/164 (43%), Gaps = 1/164 (0%)
Query: 505 DQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEAL 564
+QA +L M AGV A + YA +KA R LLR+ G++ Y+A
Sbjct: 371 EQAVSVLRSMSEAGVAAEAKCYAVTIKACGRGRRWARALELLREMEKNGVEPIVMGYDAC 430
Query: 565 LQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQ 624
+ + K A+ L +EM + + + + C Q+++ +LL+E+ +
Sbjct: 431 IAACGDGKQWEQAVALLREMPTVGVTPT-VVSYSHAIAACGQSYQWKPALELLREMPQEA 489
Query: 625 RIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTF 668
I+ +NN + + + A L+ M S+G AQ++
Sbjct: 490 GINPDAVCYNNCMTALGRGLQWEMALTLLREMPSVGLPIKAQSY 533
>gi|357130059|ref|XP_003566674.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
distachyon]
Length = 833
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 80/179 (44%), Gaps = 4/179 (2%)
Query: 518 GVRASSSVYASLLKAYIEANRPREVTALL-RDARSAGIQLDASCYEALLQSKIVQKDTPG 576
G++ V + LLK A R +V LL G++ D Y ++++ +
Sbjct: 149 GLKMDVIVASILLKCLYHAKRSDDVVNLLLHRMPELGVEPDTISYNTVVKTLCEDSRSQR 208
Query: 577 ALHLFKEM-KESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRIDCGVHDWNN 635
AL L M K+S + ++ G + E L E+ + Q + V + +
Sbjct: 209 ALDLLHTMVKKSGGCSPNVVTYNTVIHGLFREGEVSKACNLFHEMMQ-QGVVPDVVTYTS 267
Query: 636 VIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEMKS 694
+I CK R M AE L++M S G PN T++ M+ GY +I G++ E ++ EM S
Sbjct: 268 IIDALCKARAMDKAELVLRQMISNGFQPNKVTYNCMIHGY-SISGQWKETAGMFREMTS 325
Score = 45.4 bits (106), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 55/249 (22%), Positives = 100/249 (40%), Gaps = 16/249 (6%)
Query: 431 GMLQKQVELIT--TEHGILQPTEKIYIKLVKAFLEAGKTKE---LTHFLIKAEKENLQVS 485
G L K EL++ GI +P + ++ + + G+ E + F+I + ++
Sbjct: 486 GNLVKAKELVSEMMSRGIPRPNIVFFNSIINSLCKEGRVVEAHDIFDFVIHIGERPDVIT 545
Query: 486 HDDAALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTAL 545
+ G+ + +G +++A +LD M AG+ Y +L+ Y R + L
Sbjct: 546 FNSLIDGYGL-----VGKIEKAFGVLDAMISAGIEPDVVSYNTLIDGYCRNGRIDDGLIL 600
Query: 546 LRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCA 605
+ S G++ Y +L T GA + EM ES +L C
Sbjct: 601 FGEMLSKGVKPTTITYGIILHGLFNDGRTVGAKKMCHEMIESGTTMDISTCGIILGGLCR 660
Query: 606 QN--HEAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLP 663
N EA M K L + + + N +I K R ++A++ + + G +P
Sbjct: 661 NNCDDEAIAMFKKLGAMN----VKFNIAIINTMIDAMYKVRKREEAKELFDSISATGLVP 716
Query: 664 NAQTFHSMV 672
NA T+ M+
Sbjct: 717 NASTYGVMI 725
Score = 42.0 bits (97), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 46/219 (21%), Positives = 90/219 (41%), Gaps = 11/219 (5%)
Query: 465 GKTKELTHFL----IKAEKENLQVSHDDAALGHVITLCISLGWLDQAHDLLDEMHLAGVR 520
GK+KE F K K NL V++ G+ C ++D +L + M G+
Sbjct: 346 GKSKEAAEFFDSMAAKGHKPNL-VTYSVLLHGYATEGC----FVDML-NLFNSMEGNGIV 399
Query: 521 ASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHL 580
A V+ ++ AY + E + + G+ DA Y ++ + A+
Sbjct: 400 ADQRVFNIVIDAYGKRGMMDETMLIFTQMQEQGVIPDACTYGIVIAAFSRMGRLADAMDK 459
Query: 581 FKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFF 640
F +M + G + L++G + +L+ E+ + +N++I+
Sbjct: 460 FNQMIAMGLKPEG-IVYHSLIQGFCMHGNLVKAKELVSEMMSRGIPRPNIVFFNSIINSL 518
Query: 641 CKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIG 679
CK+ + +A + +G P+ TF+S++ GY +G
Sbjct: 519 CKEGRVVEAHDIFDFVIHIGERPDVITFNSLIDGYGLVG 557
>gi|356577033|ref|XP_003556634.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39710-like [Glycine max]
Length = 757
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 62/270 (22%), Positives = 113/270 (41%), Gaps = 22/270 (8%)
Query: 447 LQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQ 506
P+ Y LV + G+ +E L + L D + VI L +
Sbjct: 413 FSPSVVTYNALVHGYCFLGRVQEAVGILRGMVERGL--PPDVVSYSTVIAGFCRERELGK 470
Query: 507 AHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQ 566
A + +EM GV + Y+SL++ + E L R+ G+ D Y +L+
Sbjct: 471 AFQMKEEMVEKGVLPDTVTYSSLIQGLCLQQKLVEAFDLFREMMRRGLPPDEVTYTSLIN 530
Query: 567 SKIVQKDTPGALHLFKEM-KESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQR 625
+ V + AL L EM + +P + + +L+ G + + +LL ++ +
Sbjct: 531 AYCVDGELSKALRLHDEMVQRGFLP--DNVTYSVLINGLNKKARTKVAKRLLLKLFYEES 588
Query: 626 I-----------DCGVHDWNNV---IHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSM 671
+ +C +++ +V + FC K LM +A++ K M H PNA ++ M
Sbjct: 589 VPDDVTYNTLIENCSNNEFKSVEGLVKGFCMKGLMNEADRVFKTMLQRNHKPNAAIYNLM 648
Query: 672 VTGYAAIGGKYTEVTELWGEMK--SFASST 699
+ G++ GG + L+ E++ SFA T
Sbjct: 649 IHGHSR-GGNVHKAYNLYMELEHSSFACHT 677
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 66/301 (21%), Positives = 117/301 (38%), Gaps = 9/301 (2%)
Query: 447 LQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQ 506
+ P Y +++ + G ++ F+ K EKE +S + +I + +
Sbjct: 203 VSPNVYTYNVIIRGVVSQGDLEKGLGFMRKMEKEG--ISPNVVTYNTLIDASCKKKKVKE 260
Query: 507 AHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQ 566
A LL M + GV A+ Y S++ R EV L+ + R G+ D Y L+
Sbjct: 261 AMALLRAMAVGGVAANLISYNSVINGLCGKGRMSEVGELVEEMRGKGLVPDEVTYNTLVN 320
Query: 567 SKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRI 626
+ + L L EM + + ++ C + + + Q G R
Sbjct: 321 GFCKEGNLHQGLVLLSEMVGKGLSPNVVTYTTLINCMCKAGNLSRAVEIFDQMRVRGLRP 380
Query: 627 DCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVT 686
+ + +I FC+K LM +A K L M G P+ T++++V GY +G V
Sbjct: 381 N--ERTYTTLIDGFCQKGLMNEAYKVLSEMIVSGFSPSVVTYNALVHGYCFLG----RVQ 434
Query: 687 ELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFIDKYKYRTL 746
E G ++ + D +V+ F R +A ++ M E + D Y +L
Sbjct: 435 EAVGILRGMVER-GLPPDVVSYSTVIAGFCRERELGKAFQMKEEMVEKGVLPDTVTYSSL 493
Query: 747 F 747
Sbjct: 494 I 494
Score = 43.5 bits (101), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 45/230 (19%), Positives = 90/230 (39%), Gaps = 8/230 (3%)
Query: 447 LQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQ 506
L P Y L+ +AG + L+ ++ +I G +++
Sbjct: 343 LSPNVVTYTTLINCMCKAGNLSRAVEIFDQMRVRGLR--PNERTYTTLIDGFCQKGLMNE 400
Query: 507 AHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQ 566
A+ +L EM ++G S Y +L+ Y R +E +LR G+ D Y ++
Sbjct: 401 AYKVLSEMIVSGFSPSVVTYNALVHGYCFLGRVQEAVGILRGMVERGLPPDVVSYSTVIA 460
Query: 567 SKIVQKDTPGALHLFKEMKESKI-PRSGHQEFEMLVKG-CAQNHEAGLMAKLLQEVKEGQ 624
+++ A + +EM E + P + + L++G C Q + ++ G
Sbjct: 461 GFCRERELGKAFQMKEEMVEKGVLPDT--VTYSSLIQGLCLQQKLVEAFDLFREMMRRGL 518
Query: 625 RIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTG 674
D + ++I+ +C + A + M G LP+ T+ ++ G
Sbjct: 519 PPD--EVTYTSLINAYCVDGELSKALRLHDEMVQRGFLPDNVTYSVLING 566
>gi|334183626|ref|NP_176639.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122242336|sp|Q0WKZ3.1|PP105_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g64580
gi|110741328|dbj|BAF02214.1| hypothetical protein [Arabidopsis thaliana]
gi|332196134|gb|AEE34255.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 523
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 90/200 (45%), Gaps = 2/200 (1%)
Query: 480 ENLQVSHDDAALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRP 539
ENL +SHD + +I L A LL +M G R S SLL + + NR
Sbjct: 106 ENLGISHDLYSFTILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRF 165
Query: 540 REVTALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEM 599
+E +L+ G + Y ++ +D AL +F M++ I R+ +
Sbjct: 166 QEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGI-RADAVTYNT 224
Query: 600 LVKGCAQNHEAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSL 659
L+ G + + A+LL+++ + ++ID V + +I F K+ + +A K M
Sbjct: 225 LISGLSNSGRWTDAARLLRDMVK-RKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRR 283
Query: 660 GHLPNAQTFHSMVTGYAAIG 679
+PN T++S++ G+ G
Sbjct: 284 SVVPNVFTYNSLINGFCIHG 303
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 59/247 (23%), Positives = 109/247 (44%), Gaps = 15/247 (6%)
Query: 504 LDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEA 563
L+ A ++ M G+RA + Y +L+ + R + LLRD I + + A
Sbjct: 200 LNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTA 259
Query: 564 LLQSKIVQKDTPGALHLFKEM-KESKIPRSGHQEFEMLVKG-CAQN--HEAGLMAKLLQE 619
L+ + + + + A +L+KEM + S +P + L+ G C +A M L+
Sbjct: 260 LIDTFVKEGNLLEARNLYKEMIRRSVVPNV--FTYNSLINGFCIHGCLGDAKYMFDLM-- 315
Query: 620 VKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIG 679
V +G D V +N +I FCK + ++D K M G + +A T+++++ GY
Sbjct: 316 VSKGCFPD--VVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQ-A 372
Query: 680 GKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFID 739
GK +++ M S + LLD + G +A +V +++ +M +D
Sbjct: 373 GKLNVAQKVFNRMVDCGVSPDIVTYNILLDCL----CNNGKIEKALVMVEDLQKSEMDVD 428
Query: 740 KYKYRTL 746
Y +
Sbjct: 429 IITYNII 435
>gi|449463822|ref|XP_004149630.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g49730-like [Cucumis sativus]
Length = 641
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 73/325 (22%), Positives = 143/325 (44%), Gaps = 38/325 (11%)
Query: 432 MLQKQVELI--TTEHGILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDA 489
M++K VE++ ++G +P E ++ L+ A + G KE E+++V +
Sbjct: 192 MVKKAVEVLDEMPKYGC-EPDEYVFGCLLDALCKNGSVKEAASLF-----EDMRVRFN-P 244
Query: 490 ALGHVITLCISLGW-----LDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTA 544
L H +L GW + +A +L ++ AG VY +LL Y +A + R+
Sbjct: 245 NLRHFTSLL--YGWCREGKIMEAKHVLVQIKEAGFEPDIVVYNNLLGGYAQAGKMRDAFD 302
Query: 545 LLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKG- 603
LL + + +A+ + L+QS + A+ +F EM+ S + + L+ G
Sbjct: 303 LLAEMKKVNCGPNAASFTILIQSFCKTEKMDEAMRIFTEMQGSGC-EADVVTYTTLISGF 361
Query: 604 CAQNHEAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFC------KKRLMQDAEKALKRMR 657
C + L +++G HD + + + C KK +++ + ++ MR
Sbjct: 362 CKWGNTDKAYEILDDMIQKG-------HDPSQ-LSYLCIMMAHEKKEELEECMELIEEMR 413
Query: 658 SLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVR 717
+G +P+ +++M+ + G E LWGEM+ A + D +L +++ F+
Sbjct: 414 KIGCVPDLNIYNTMIRLVCKL-GDLKEAVRLWGEMQ--AGGLNPGLDTYIL--MVHGFLS 468
Query: 718 GGFFARANEVVA-MMEEGKMFIDKY 741
G A + M+E G + +Y
Sbjct: 469 QGCLVEACDYFKEMVERGLLSAPQY 493
>gi|449455956|ref|XP_004145716.1| PREDICTED: pentatricopeptide repeat-containing protein At5g16420,
mitochondrial-like [Cucumis sativus]
gi|449492939|ref|XP_004159147.1| PREDICTED: pentatricopeptide repeat-containing protein At5g16420,
mitochondrial-like [Cucumis sativus]
Length = 535
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 58/261 (22%), Positives = 104/261 (39%), Gaps = 53/261 (20%)
Query: 504 LDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEA 563
+ LL E+ +G+ S ++ +++++Y A+RP+ ++ G++
Sbjct: 102 FEPVESLLLELQDSGINCSEDLFITVIRSYGLASRPKMALKTFLRIQTFGVRRSVRSLNT 161
Query: 564 LLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEG 623
LL + +VQ + ++HL + +SK G N
Sbjct: 162 LLNA-LVQNNRFSSVHLLFKYSKSKF-------------GVVPN---------------- 191
Query: 624 QRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYT 683
V N +I CKK ++ A K M S+G +PN T+ +++ GY + G
Sbjct: 192 ------VFTCNILIKALCKKNDVEGARKVFDEMPSMGIVPNVVTYTTILGGYVS-RGDMI 244
Query: 684 EVTELWGEMKSFASSTSMNFDEELL-DSVLYT-----FVRGGFFARANEVVAMMEEGKMF 737
++GE+ FD L D+ YT +V+ G F A +V+ MEE +
Sbjct: 245 GAKRVFGEL----------FDHGWLPDATTYTILMDGYVKQGRFTDAVKVMDEMEENGVE 294
Query: 738 IDKYKYRTLFLKYHKTLYKGK 758
+ Y + L Y K G+
Sbjct: 295 PNDITYGVIILGYCKERKSGE 315
Score = 43.1 bits (100), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 58/288 (20%), Positives = 118/288 (40%), Gaps = 23/288 (7%)
Query: 499 ISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDA 558
+S G + A + E+ G ++ Y L+ Y++ R + ++ + G++ +
Sbjct: 238 VSRGDMIGAKRVFGELFDHGWLPDATTYTILMDGYVKQGRFTDAVKVMDEMEENGVEPND 297
Query: 559 SCYEALLQSKIVQKDTPGALHLFKEMKESK-IPRSG--HQEFEMLVKGCAQNHEAGLMAK 615
Y ++ ++ + AL+L +M E K IP S + ++L + K
Sbjct: 298 ITYGVIILGYCKERKSGEALNLLNDMLEKKYIPNSALCCKVIDVLCGEGRVKEACKMWEK 357
Query: 616 LLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGY 675
LL K+ D + + +IH+ CK+ + +A K G + + T+++++ G
Sbjct: 358 LL---KKNCTPDNAIT--STLIHWLCKEGNIWEARKLFNEFER-GTISSLLTYNTLIAGM 411
Query: 676 AAIGGKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGK 735
+ G+ E LW +M +E + ++ F++ G +A EV+ ++EE
Sbjct: 412 CEM-GELCEAARLWDDMLEKGCVP----NEFTYNMLIKGFLKVG---KAKEVIKVVEE-- 461
Query: 736 MFIDK---YKYRTLFLKYHKTLYKGKTPKFQTEAQLKKREAALGFKKW 780
+DK T + L GK + + A+ FK W
Sbjct: 462 -MLDKGCLLNESTYLILVEGLLKLGKREELLNILSMIISSGAVDFKAW 508
>gi|224103543|ref|XP_002313097.1| predicted protein [Populus trichocarpa]
gi|222849505|gb|EEE87052.1| predicted protein [Populus trichocarpa]
Length = 751
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 63/263 (23%), Positives = 111/263 (42%), Gaps = 20/263 (7%)
Query: 449 PTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQAH 508
PT Y L+ +G+ +E L E + L S D + +I LD+A
Sbjct: 411 PTIVTYNALLNGHCVSGRMEEAIGLLRGMEGKGL--SPDVVSYSTIIAGFCRYQELDRAF 468
Query: 509 DLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSK 568
+ EM GV + Y+SL++ E R E L ++ + + D Y +L+
Sbjct: 469 QMNAEMVEKGVSPDAITYSSLIQGLCEQRRLNEACDLFQEMLNKSLLPDEFTYTSLINGY 528
Query: 569 IVQKDTPGALHLFKEM-KESKIPRSGHQEFEMLVKGC---AQNHEAG-LMAKLL--QEVK 621
+ D AL+L EM K+ +P + + +L+ G A+ EA L+ KL + +
Sbjct: 529 CKEGDLNEALNLHDEMIKKGFLPDT--VTYNVLINGLNKQARTREAKRLLLKLFYDESIP 586
Query: 622 EGQRIDCGVHDWNNV--------IHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVT 673
G D + +++ I FC K LM +A++ + M PN ++ ++
Sbjct: 587 NGITYDTLIESCSDIEFKSVVALIKGFCMKGLMNEADQVFESMIKRNQKPNEAVYNVIIH 646
Query: 674 GYAAIGGKYTEVTELWGEMKSFA 696
G+ G + + +L+ EM F
Sbjct: 647 GHCRDGNVH-KAHKLYKEMVDFG 668
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 46/228 (20%), Positives = 88/228 (38%), Gaps = 4/228 (1%)
Query: 447 LQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQ 506
L P Y L+ +AG F + L+ + +I G++D+
Sbjct: 339 LPPDVVTYTSLINTMCKAGNLNRAMEFFDQMHVRGLR--PNGVTYTSLINGFSQKGFMDE 396
Query: 507 AHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQ 566
A+ + DEM +G + Y +LL + + R E LLR G+ D Y ++
Sbjct: 397 AYRIWDEMIRSGFPPTIVTYNALLNGHCVSGRMEEAIGLLRGMEGKGLSPDVVSYSTIIA 456
Query: 567 SKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRI 626
++ A + EM E + + L++G + L QE+ +
Sbjct: 457 GFCRYQELDRAFQMNAEMVEKGVSPDA-ITYSSLIQGLCEQRRLNEACDLFQEMLNKSLL 515
Query: 627 DCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTG 674
+ ++I+ +CK+ + +A M G LP+ T++ ++ G
Sbjct: 516 P-DEFTYTSLINGYCKEGDLNEALNLHDEMIKKGFLPDTVTYNVLING 562
Score = 53.1 bits (126), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 88/206 (42%), Gaps = 6/206 (2%)
Query: 496 TLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQ 555
T+C + G L++A + D+MH+ G+R + Y SL+ + + E + + +G
Sbjct: 352 TMCKA-GNLNRAMEFFDQMHVRGLRPNGVTYTSLINGFSQKGFMDEAYRIWDEMIRSGFP 410
Query: 556 LDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAK 615
Y ALL V A+ L + M E K + ++ G + E +
Sbjct: 411 PTIVTYNALLNGHCVSGRMEEAIGLLRGM-EGKGLSPDVVSYSTIIAGFCRYQELDRAFQ 469
Query: 616 LLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGY 675
+ E+ E + + ++++I C++R + +A + M + LP+ T+ S++ GY
Sbjct: 470 MNAEMVE-KGVSPDAITYSSLIQGLCEQRRLNEACDLFQEMLNKSLLPDEFTYTSLINGY 528
Query: 676 AAIGGKYTEVTELWGEM--KSFASST 699
G E L EM K F T
Sbjct: 529 CK-EGDLNEALNLHDEMIKKGFLPDT 553
Score = 49.3 bits (116), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 50/246 (20%), Positives = 104/246 (42%), Gaps = 12/246 (4%)
Query: 489 AALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVT-ALLR 547
A V+ C L ++++A +++D L G Y ++L + + +P + R
Sbjct: 133 AVFDLVVKSCSYLNFIEKALNIVDLAKLNGFMPGVLSYNAILDSIVRCRKPVIFAEKVYR 192
Query: 548 DARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESK-IPRSGHQEFEMLVKGCAQ 606
+ ++G+ L+ Y L++ + L F+EM+ ++ +P + ++ +
Sbjct: 193 EMIASGVSLNVFSYNILIRGFCAAGNLEMGLRFFEEMERNRCLPNV--VTYNTVIGAYCK 250
Query: 607 NHEAGLMAKLLQEVK-EGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNA 665
KLL+ + EG ++ + +N VI+ C+ +++ L M G P+
Sbjct: 251 LKRIDEAFKLLRSMGLEG--LEPNLLTYNMVINGLCRVGRIEETSGVLAEMDRKGFAPDG 308
Query: 666 QTFHSMVTGYAAIGGKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARAN 725
T++++V GY + G + + L EM + D S++ T + G RA
Sbjct: 309 VTYNTLVNGYCKV-GNFHQALVLHSEML----RNGLPPDVVTYTSLINTMCKAGNLNRAM 363
Query: 726 EVVAMM 731
E M
Sbjct: 364 EFFDQM 369
>gi|357115764|ref|XP_003559656.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
distachyon]
Length = 867
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 77/177 (43%), Gaps = 3/177 (1%)
Query: 517 AGVRASSSVYASLLKAYIEANRPRE-VTALLRDARSAGIQLDASCYEALLQSKIVQKDTP 575
AG+R V + LK A R E ++ LL G DA Y +++S +
Sbjct: 194 AGLRTDGIVTNTFLKCLCYAKRTDEALSMLLHRMSELGCVPDAFSYNTVIKSLCGGSRSQ 253
Query: 576 GALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRIDCGVHDWNN 635
AL + M + + M++ G E L E+ + + V +N+
Sbjct: 254 EALDMLLRMTKGDGCSPDVVSYTMVIHGLFMEGEISKACNLFNEMVQKGVVP-NVVTYNS 312
Query: 636 VIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEM 692
++H CK R M AE L++M P+ T+ +M+ GY+ + G++ E +++ EM
Sbjct: 313 IVHALCKARAMDKAELVLRQMFDNSIQPDEVTYTAMIHGYSCL-GRWKEAAKMFKEM 368
Score = 56.2 bits (134), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 71/175 (40%), Gaps = 3/175 (1%)
Query: 502 GWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCY 561
G +D+A + EM GV + YA+++ A R + L S G++ + Y
Sbjct: 461 GMMDEALLIFTEMRGQGVSPNVVTYATVIAALCRMGRLADAMEKLSQMISIGLKPNTVVY 520
Query: 562 EALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKG-CAQNHEAGLMAKLLQEV 620
+L+Q D A L EM + IPR F ++ C + +
Sbjct: 521 HSLIQGFCTHGDLIKAKELVSEMMDQGIPRPNITFFSSIIHSLCNEGRVMNAQDVFNLVI 580
Query: 621 KEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGY 675
G R D + +N++I +C M A L M S G P+ T+ +++ GY
Sbjct: 581 HIGDRPD--IFTFNSLIDGYCLVGKMDKAFGVLDAMVSAGTEPDVVTYSTLINGY 633
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 89/508 (17%), Positives = 199/508 (39%), Gaps = 46/508 (9%)
Query: 251 PNTNTFNIALAGCLLFETTRKAEQLLDIMPRIGVKADSNLLIIMAHIYERNGRREELRKL 310
P+ TFN + + +++A ++ + G K D I+ H Y GR ++ L
Sbjct: 375 PDIVTFNSLMDSLCKHKRSKEAAEIFHSIATKGHKPDIISYSILLHGYATEGRFVDMNNL 434
Query: 311 QRHIDEAVNLSDIQFRQFYNCLLSCHLKFGDLNSASKMVLEMLQRAKEARNSLAAAMLPF 370
+ + ++D +N L++ H K G ++ A + EM + N + A +
Sbjct: 435 FHSMTDNGIVAD---SHCFNILINAHAKRGMMDEALLIFTEMRGQGVSP-NVVTYATVIA 490
Query: 371 NAVGVNNRTPSEQNVNCTNSVDLENSGIIENHILSYEDFTKDRKFVALEAEVKRVLQTLL 430
+ + + ++ S+ L+ + ++ + ++ + F
Sbjct: 491 ALCRMGRLADAMEKLSQMISIGLKPNTVVYHSLI--QGFCTH------------------ 530
Query: 431 GMLQKQVELIT--TEHGILQPTEKIYIKLVKAFLEAGKT---KELTHFLIKAEKENLQVS 485
G L K EL++ + GI +P + ++ + G+ +++ + +I +
Sbjct: 531 GDLIKAKELVSEMMDQGIPRPNITFFSSIIHSLCNEGRVMNAQDVFNLVIHIGDRPDIFT 590
Query: 486 HDDAALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTAL 545
+ G+ + +G +D+A +LD M AG Y++L+ Y ++ R + L
Sbjct: 591 FNSLIDGYCL-----VGKMDKAFGVLDAMVSAGTEPDVVTYSTLINGYFKSGRIDDGLIL 645
Query: 546 LRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCA 605
R+ ++ Y +L T A +F EM ES S + ++++G
Sbjct: 646 FREMLCKRVKPTTVTYSLVLDGLFRAGRTSAAKKMFHEMIESGTAMS-ISTYTIILQGLC 704
Query: 606 QNHEAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNA 665
+N+ L ++ + + N +IH K + ++A + + G +PNA
Sbjct: 705 RNNCTDEAITLFHKLG-AMNLKFEIAILNTMIHALYKVKRREEAHDLFASVSASGLVPNA 763
Query: 666 QTFHSMVTGYAAIGGKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYT--FVRGGFF-A 722
T+ M+ G E ++ M+ + S +++ +L V+ G++ +
Sbjct: 764 STYGVMIINLLK-EGSVEEADIMFSSMEKTGCAPSSRLLNDIIRMLLQKGEIVKAGYYMS 822
Query: 723 RANEVVAMMEEG------KMFIDKYKYR 744
+ + + +E +F K +YR
Sbjct: 823 KVDGTIISLEASTTSLLISLFASKGRYR 850
Score = 47.8 bits (112), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 50/246 (20%), Positives = 86/246 (34%), Gaps = 40/246 (16%)
Query: 447 LQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQ 506
+QP E Y ++ + G+ KE + +E L D ++ +
Sbjct: 338 IQPDEVTYTAMIHGYSCLGRWKEAAKMFKEMTREGLI--PDIVTFNSLMDSLCKHKRSKE 395
Query: 507 AHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQ 566
A ++ + G + Y+ LL Y R ++ L GI D+ C+ L+
Sbjct: 396 AAEIFHSIATKGHKPDIISYSILLHGYATEGRFVDMNNLFHSMTDNGIVADSHCFNILIN 455
Query: 567 SKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRI 626
+ + AL +F EM+ GQ +
Sbjct: 456 AHAKRGMMDEALLIFTEMR-------------------------------------GQGV 478
Query: 627 DCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVT 686
V + VI C+ + DA + L +M S+G PN +HS++ G+ G +
Sbjct: 479 SPNVVTYATVIAALCRMGRLADAMEKLSQMISIGLKPNTVVYHSLIQGFCT-HGDLIKAK 537
Query: 687 ELWGEM 692
EL EM
Sbjct: 538 ELVSEM 543
>gi|357110688|ref|XP_003557148.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g27270-like [Brachypodium distachyon]
Length = 1038
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 58/240 (24%), Positives = 104/240 (43%), Gaps = 12/240 (5%)
Query: 494 VITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAG 553
V LC G +A++L EM G + + L+ + + +E ++
Sbjct: 684 VDALC-KCGKTAEAYNLFMEMADRGHSRDAVTISILVSHLTKHGKFQEAENIINGCFHGK 742
Query: 554 IQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLM 613
+QLD Y ++S + A+ + M S IP+S Q F +++ Q +
Sbjct: 743 VQLDTVVYNTFIKSMLESGKLYSAVSIHDRMISSGIPQS-LQTFNIMISVYGQGGKLDKA 801
Query: 614 AKLLQEVKE-GQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMV 672
++ +E G RID + N++ F+ K QDA RM+ G +P +F+SMV
Sbjct: 802 TEMFTAAQELGLRID--EKTYTNMLSFYGKAGRHQDASVLFTRMKEEGIMPGKISFNSMV 859
Query: 673 TGYAAIGGKYTEVTELWGEMKSFASSTSMNFDEELLD-SVLYTFVRGGFFARANEVVAMM 731
YA G + + ++ EM+S S E L +++ + G +++A E + MM
Sbjct: 860 NVYAT-SGLHDKAKFIFEEMQS-----SGQIPESLTYLALIKAYTEGRSYSKAEEAIQMM 913
Score = 44.3 bits (103), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 47/217 (21%), Positives = 96/217 (44%), Gaps = 13/217 (5%)
Query: 444 HGILQPTEKIYIKLVKAFLEAGKTKELTHFL-IKAEKENLQVSHDDAALGHVITLCISLG 502
HGI+ P+ L+ + KT++ + L + AE E ++ D+ G ++ + +G
Sbjct: 344 HGIV-PSNYTCASLLSLYY---KTEDYSKALSLFAEMEQSRIVPDEVIYGILVRIYGKVG 399
Query: 503 WLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYE 562
+ A +E+ A + + Y ++ + ++ A +L R ++ Y
Sbjct: 400 LYEDAQCTFEEIDRADLLSDEQTYVAMAQVHMNAGNYDRALQVLDSMRLRNVEPSLFSYS 459
Query: 563 ALLQSKIVQKDTPGALHLFKEMKESKIPR--SGHQEFEMLVKGCAQNHEAGLMAKLLQEV 620
A+L+ + ++D A F+ + + IP + + VK + L+ KL +EV
Sbjct: 460 AVLRCHVAKEDIAAAEDAFRALSKCGIPDVFCCNDLLRLYVKLGQLEKASALILKLRKEV 519
Query: 621 KEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMR 657
+ +D G+ V+ CK ++ DA+K LK M+
Sbjct: 520 Q----LDEGL--CMTVMEVCCKSGMIVDADKILKEMQ 550
>gi|297800104|ref|XP_002867936.1| hypothetical protein ARALYDRAFT_492917 [Arabidopsis lyrata subsp.
lyrata]
gi|297313772|gb|EFH44195.1| hypothetical protein ARALYDRAFT_492917 [Arabidopsis lyrata subsp.
lyrata]
Length = 817
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 139/630 (22%), Positives = 234/630 (37%), Gaps = 133/630 (21%)
Query: 122 FPRKTLVNKILTSFVESLDSKWLEKAYGLVEQAFEEGKQILLEKEPLIYLSL----GLSK 177
FP KT N +LTS V + + + +A+ +V + P +YL K
Sbjct: 215 FPSKTTCNILLTSLVRATEFQKCCEAFHVVCKGVS----------PDVYLFTTAINAFCK 264
Query: 178 CGLPVPASTILRKLVATEQYPPVTAWSAILAHMSLTA--PGAYLAAELILEIGYLFQDGR 235
G A + K+ P V ++ ++ + ++ A++ E ++E G
Sbjct: 265 GGKVEEAIELFSKMEEAGVVPNVVTYNTVIDGLGMSGRYDEAFMFKEKMVERG------- 317
Query: 236 VDPRKKCNAPLIAMKPNTNTFNIALAGCLLFETTRKAEQLLDIMPRIGVKADSNLLIIMA 295
V+P + L+ K T I A C+L E T K P + V +NL+ +
Sbjct: 318 VEPTLITYSILV--KGLTKAKRIGDAYCVLKEMTEKG-----FPPNVIVY--NNLIDSLI 368
Query: 296 HIYERNGRREELRKLQRHIDEAVNLSDIQFRQFYNCLLSCHLKFGDLNSASKMVLEMLQR 355
N + E++ L + + ++L+ YN L+ + K G + A +++ EML
Sbjct: 369 EAGSLN-KAIEIKDLM--VSKGLSLTS----STYNTLIKGYCKSGQADIAERLLKEML-- 419
Query: 356 AKEARNSLAAAMLPFNAVGVNNRTPSEQNVNCTNSVDLENSGIIENHILSYEDFTKDRKF 415
++G N S +V C + S+ F +F
Sbjct: 420 ----------------SIGFNVNQGSFTSVICL--------------LCSHHMFDSALRF 449
Query: 416 VALEAEVKRVLQTLLGMLQKQVELITT------EHGILQPTEKIYIKLV-KAFLEAGKTK 468
V + LL + L+TT +HG ++++K + K FL KT
Sbjct: 450 VG---------EMLLRNMSPGGGLLTTLISGLCKHGKHSKAVELWLKFLNKGFLVDTKTS 500
Query: 469 E-LTHFLIKAEK--ENLQVSHDDAALGHV---------ITLCISLGWLDQAHDLLDEMHL 516
L H L +A K E ++ + G V I+ C LD+A +DEM
Sbjct: 501 NALLHGLCEAGKLEEGFRIQKEILGRGFVMDRVSYNTLISGCCGNKKLDEAFMFMDEMVK 560
Query: 517 AGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQKDTPG 576
G++ + Y+ L++ + N+ E D + G+ D Y ++ + T
Sbjct: 561 KGLKPDNYTYSILIRGLLNMNKVEEAIQFWGDCKRNGMIPDVYTYSVMIDGCCKAERTEE 620
Query: 577 ALHLFKEMKESKIP--------------RSGHQEF------EMLVKGCAQNHEA------ 610
LF EM + + RSG +M KG + N
Sbjct: 621 GQKLFDEMMSNNLQPNTVVYNHLIGAYCRSGRLSMALELREDMKHKGISPNSATYTSLIK 680
Query: 611 GLM-------AKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLP 663
G+ AKLL E + ++ V + +I + K M E L+ M S P
Sbjct: 681 GMSIISRVEEAKLLLEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHP 740
Query: 664 NAQTFHSMVTGYAAIGGKYTEVTELWGEMK 693
N T+ M+ GYA G TE + L EM+
Sbjct: 741 NKITYTVMIGGYAR-DGNVTEASRLLHEMR 769
>gi|449531171|ref|XP_004172561.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59900-like [Cucumis sativus]
Length = 761
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 54/232 (23%), Positives = 97/232 (41%), Gaps = 10/232 (4%)
Query: 454 YIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQAHDLLDE 513
Y L+ F +GK K+ + E ++ V D +I + G + +A++LL+
Sbjct: 521 YTSLIHGFCRSGKWKDAKYLF--NEMVDIGVQPDVTTFSVLIDMLCKEGKVIEANELLEV 578
Query: 514 MHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQKD 573
M G ++ Y +L+K +R E T L + G D Y L++ +
Sbjct: 579 MIQRGCIPNTVTYTTLVKGLCMNDRISEATQLFMKMQKLGCLPDVVTYGTLMKGLCQTGN 638
Query: 574 TPGALHLFKEMKESKIPRSGHQ------EFEMLVKGCAQNHEAGLMAKLLQEVKEGQRID 627
AL L K+M S + G + +++ G ++ +L +E+K I
Sbjct: 639 IKTALELHKKML-SDTGQYGTNFKPDVISYSIIIDGLCKHGREDEARELFKEMKALGVIP 697
Query: 628 CGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIG 679
V + ++IH FC+ ++DA+ M G NA T+ M+ G+ G
Sbjct: 698 -NVISYTSLIHGFCRSGKLEDAKHLFNEMVDQGVQLNAVTYSVMIHGFCKEG 748
Score = 53.1 bits (126), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 48/218 (22%), Positives = 92/218 (42%), Gaps = 8/218 (3%)
Query: 497 LCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQL 556
C S W ++A L +EM G+R+ + + L+ + + E LL G L
Sbjct: 166 FCRSGKW-EKAKCLFNEMLDVGIRSDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCIL 224
Query: 557 DASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKL 616
D Y L++ ++ A LF M++ R + L+KG Q +L
Sbjct: 225 DIVTYSTLIKGLCMKHRISEATRLFMSMQKLGC-RPDAIAYGTLMKGLCQTGNINTALQL 283
Query: 617 LQEV-----KEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSM 671
QE+ + G + + ++ +I CK R +A + K M++ G +P+ ++ ++
Sbjct: 284 HQEMLNDTGRYGIKCKPTLISYSIIIDGLCKDRREDEARELFKEMKAQGIMPDVISYTTL 343
Query: 672 VTGYAAIGGKYTEVTELWGEMKSFASSTSMNFDEELLD 709
+ G+ + GK+ + L+ EM + L+D
Sbjct: 344 IHGF-CLSGKWEKAKCLFNEMLDVGIQPDVTTSSVLID 380
>gi|15237575|ref|NP_198933.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75309191|sp|Q9FLL3.1|PP412_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g41170, mitochondrial; Flags: Precursor
gi|9759163|dbj|BAB09719.1| salt-inducible protein-like [Arabidopsis thaliana]
gi|66792708|gb|AAY56456.1| At5g41170 [Arabidopsis thaliana]
gi|332007267|gb|AED94650.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 527
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 94/217 (43%), Gaps = 11/217 (5%)
Query: 502 GWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCY 561
G ++ A L D+M G+R +Y SL+ + R R+ +LLR I+ D +
Sbjct: 191 GHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITF 250
Query: 562 EALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEML----VKGCAQNHEAGLMAKLL 617
AL+ + + + A L+ EM I + ++ ++GC EA M L+
Sbjct: 251 NALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVD--EARQMFYLM 308
Query: 618 QEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAA 677
+ +G D V + ++I+ FCK + + DA K M G N T+ +++ G+
Sbjct: 309 ET--KGCFPD--VVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQ 364
Query: 678 IGGKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYT 714
+ GK E++ M S ++ LL + Y
Sbjct: 365 V-GKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYN 400
Score = 48.5 bits (114), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 70/173 (40%), Gaps = 2/173 (1%)
Query: 507 AHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQ 566
A L +M G + SL+ + NR E +++ GI+ D Y ++
Sbjct: 126 ASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIID 185
Query: 567 SKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRI 626
S AL LF +M+ I R + LV G + LL+ + + ++I
Sbjct: 186 SLCKNGHVNYALSLFDQMENYGI-RPDVVMYTSLVNGLCNSGRWRDADSLLRGMTK-RKI 243
Query: 627 DCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIG 679
V +N +I F K+ DAE+ M + PN T+ S++ G+ G
Sbjct: 244 KPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEG 296
Score = 43.1 bits (100), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 49/249 (19%), Positives = 100/249 (40%), Gaps = 6/249 (2%)
Query: 447 LQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQ 506
+ P Y L+ F G E E + D A +I +D
Sbjct: 278 IAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKG--CFPDVVAYTSLINGFCKCKKVDD 335
Query: 507 AHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQ 566
A + EM G+ ++ Y +L++ + + +P + S G+ + Y LL
Sbjct: 336 AMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLH 395
Query: 567 SKIVQKDTPGALHLFKEMKESKIPRSGHQ--EFEMLVKGCAQNHEAGLMAKLLQEVKEGQ 624
AL +F++M++ ++ + +L+ G N + + +++++ +
Sbjct: 396 CLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRK-R 454
Query: 625 RIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTE 684
+D G+ + +I CK +++A + S G PN T+ +M++G G K+ E
Sbjct: 455 EMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTYTTMISGLFREGLKH-E 513
Query: 685 VTELWGEMK 693
L+ +MK
Sbjct: 514 AHVLFRKMK 522
>gi|218190151|gb|EEC72578.1| hypothetical protein OsI_06020 [Oryza sativa Indica Group]
Length = 738
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 38/178 (21%), Positives = 83/178 (46%), Gaps = 6/178 (3%)
Query: 504 LDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEA 563
L++A + + A + YA LL+AY A ++ + R GI +A+ Y A
Sbjct: 334 LNKAESIYMALLEAQCVPTEDTYALLLRAYCNAGSLHRAEGVISEMREHGIPPNATVYNA 393
Query: 564 LLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEG 623
L + + T A+ +++ MK + R+ + F +++ + + K+ E+K
Sbjct: 394 YLDGLLKARCTEKAVEVYQRMKRERC-RANTETFTLMINVYGKAKQPMSSMKVFNEMKS- 451
Query: 624 QRIDC--GVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIG 679
I C + + +++ F ++ L + AE+ + M+ GH P+ +++++ Y+ G
Sbjct: 452 --IGCKPNICTYTALVNAFAREGLCEKAEEVFEEMQQAGHEPDVYAYNALMEAYSRAG 507
>gi|414586649|tpg|DAA37220.1| TPA: hypothetical protein ZEAMMB73_348855 [Zea mays]
gi|414586650|tpg|DAA37221.1| TPA: hypothetical protein ZEAMMB73_348855 [Zea mays]
Length = 969
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 52/239 (21%), Positives = 97/239 (40%), Gaps = 18/239 (7%)
Query: 449 PTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQAH 508
P Y K++ EA K ++ FL+ E +++ V D +I +G ++QA
Sbjct: 453 PDTSTYSKVITFLCEAMKVEK--AFLLFQEMKSVGVIPDVYTYTILIDSFCKVGLIEQAR 510
Query: 509 DLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSK 568
DEM G S Y +LL AY++ + + + + AG + Y AL+
Sbjct: 511 SWFDEMESVGCSPSVVTYTALLHAYLKTKQVPQASDIFHRMVDAGCAPNTITYSALVDGL 570
Query: 569 IVQKDTPGALHLFKEMKESKIPRSGHQEFE---------------MLVKGCAQNHEAGLM 613
++ A ++ +M + FE L+ G + H+ +
Sbjct: 571 CKAGESQKACEVYAKMIGTSDNVGSDFYFEGEHTDSIAPNVVTYGALIDGLCKAHKV-VD 629
Query: 614 AKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMV 672
A+ L +V + ++ +I FCK + +A++ RM G+LP T+ S++
Sbjct: 630 AQELLDVMSSNGCEPNHIIYDALIDGFCKVGKLDNAQEVFFRMSKCGYLPTVHTYTSLI 688
>gi|297737176|emb|CBI26377.3| unnamed protein product [Vitis vinifera]
Length = 572
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 82/170 (48%), Gaps = 4/170 (2%)
Query: 504 LDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEA 563
+D+A L +EM G++ S+ Y +L+ A ++ R R L + ++ G L S Y
Sbjct: 337 IDEAFRLFEEMRPKGLKPSTVTYNTLIGALCQSGRVRTAQKLFVEMQTCGQFLKLSTYCV 396
Query: 564 LLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEV-KE 622
LL A+ LF+ +K+++ + + F +L+ G + + K E+ K
Sbjct: 397 LLDGLCKNGHLEEAIDLFQSIKKTE-HKPNIEVFSILLDGMCRAGKLEEAWKQFDEISKN 455
Query: 623 GQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMV 672
G D +N +I+ C K ++ +A K L +M G LP++ TF+ ++
Sbjct: 456 GLEPD--TIAYNILINGLCNKGMLSEAVKLLWQMEEKGCLPDSITFNVII 503
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 61/302 (20%), Positives = 111/302 (36%), Gaps = 25/302 (8%)
Query: 454 YIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCIS----LGWLDQAHD 509
Y L+ AG KE+T FL NL V + T+ I G + +A
Sbjct: 219 YNSLIHGLSRAGLWKEVTWFL------NLMVDRGFSPDAFTFTILIDGLCKEGKVGEAQQ 272
Query: 510 LLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKI 569
+L+ MH G Y +L+ + + T L GI+L+ Y L+
Sbjct: 273 ILELMHHKGKEPDILTYNTLMNGLCLVGQLEDATKLFESLADRGIKLNVFSYNILINGYC 332
Query: 570 VQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRIDCG 629
+ A LF+EM+ + S + L+ Q+ KL E++ CG
Sbjct: 333 KDQKIDEAFRLFEEMRPKGLKPS-TVTYNTLIGALCQSGRVRTAQKLFVEMQT-----CG 386
Query: 630 ----VHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEV 685
+ + ++ CK +++A + ++ H PN + F ++ G G ++
Sbjct: 387 QFLKLSTYCVLLDGLCKNGHLEEAIDLFQSIKKTEHKPNIEVFSILLDGMCRAG----KL 442
Query: 686 TELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFIDKYKYRT 745
E W + S + D + ++ G + A +++ MEE D +
Sbjct: 443 EEAWKQFDEI-SKNGLEPDTIAYNILINGLCNKGMLSEAVKLLWQMEEKGCLPDSITFNV 501
Query: 746 LF 747
+
Sbjct: 502 II 503
Score = 46.6 bits (109), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 60/257 (23%), Positives = 104/257 (40%), Gaps = 17/257 (6%)
Query: 442 TEHGILQPTEKIYIKLVKAFLEAGKTKELTHFLIKA-EKENLQVSHDDAALGHVITLCIS 500
TE G+ K Y L+ +A KT IK EK D G +I
Sbjct: 104 TEKGLFGDA-KTYGILINGLCKARKT----GLAIKLHEKMKGNCKGDVFTYGMIIDSLCK 158
Query: 501 LGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASC 560
G +A D+ EM AG+ VY+SL+ R +E ++ GI D
Sbjct: 159 DGMTTEALDMFSEMIGAGILPDVVVYSSLMDGLCRFGRLKEALEFFKEMEGRGISADVYT 218
Query: 561 YEAL---LQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLL 617
Y +L L + K+ L+L + S + F +L+ G + + G ++L
Sbjct: 219 YNSLIHGLSRAGLWKEVTWFLNLMVDRGFSPDAFT----FTILIDGLCKEGKVGEAQQIL 274
Query: 618 QEV-KEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYA 676
+ + +G+ D + +N +++ C ++DA K + + G N +++ ++ GY
Sbjct: 275 ELMHHKGKEPD--ILTYNTLMNGLCLVGQLEDATKLFESLADRGIKLNVFSYNILINGYC 332
Query: 677 AIGGKYTEVTELWGEMK 693
K E L+ EM+
Sbjct: 333 K-DQKIDEAFRLFEEMR 348
>gi|357116365|ref|XP_003559952.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g28010-like [Brachypodium distachyon]
Length = 627
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 72/308 (23%), Positives = 115/308 (37%), Gaps = 47/308 (15%)
Query: 448 QPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQA 507
+PT Y L++A +T + L + V D G +I +D+A
Sbjct: 110 RPTAVSYTTLMRALCAERRTGQAVGLLRDMQASG--VRPDVVTYGTLIRGLCDAADVDKA 167
Query: 508 HDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQS 567
+LL EM +G+ + VY+ LL+ Y +A R V+ + + GI+ D Y L+ S
Sbjct: 168 VELLREMCESGIEPNVVVYSCLLQGYCKAGRWECVSKVFEEMSGRGIEPDVVMYTGLIDS 227
Query: 568 KIVQKDTPGALHLFKEM--------------------KESKIPRSGHQEFEMLVKGCAQN 607
+ A + +M KE + + ML KG A +
Sbjct: 228 LCREGKVKKATQVMDKMMERGLEPNVVTYNVLINSMCKEGSVKEAMSLRNNMLEKGVALD 287
Query: 608 H--------------EAGLMAKLLQEVKEGQR-IDCGVHDWNNVIHFFCKKRLMQDAEKA 652
E LL+E+ G+ ++ V +N+VIH CK M+ A +
Sbjct: 288 AVTYNTLITGLSGVLEMDEAMGLLEEMIHGETMVEPNVVTFNSVIHGLCKTGRMRQAFQV 347
Query: 653 LKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEMKSFASSTSMNFDEELLDSVL 712
M G N TF+ ++ G + K + EL EM S DS
Sbjct: 348 RDMMAENGCACNLVTFNLLIGGLLRV-HKVKKAMELMDEMASSGLEP---------DSFT 397
Query: 713 YTFVRGGF 720
Y+ + GF
Sbjct: 398 YSILINGF 405
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 93/481 (19%), Positives = 203/481 (42%), Gaps = 55/481 (11%)
Query: 248 AMKPNTNTFNIALAGCLLFETTRKAEQLLDIMPRIGVKADSNLLIIMAHIYERNGRREEL 307
++P+ T+ + G KA +LL M G++ + + + Y + GR E +
Sbjct: 143 GVRPDVVTYGTLIRGLCDAADVDKAVELLREMCESGIEPNVVVYSCLLQGYCKAGRWECV 202
Query: 308 RKLQRHIDEAVNLSDIQFRQFYNCLLSCHLKFGDLNSASKMVLEMLQRAKEARNSLAAAM 367
K+ + D+ Y L+ + G + A++++ +M++R E
Sbjct: 203 SKVFEEMSGRGIEPDVVM---YTGLIDSLCREGKVKKATQVMDKMMERGLEP-------- 251
Query: 368 LPFNAVGVN---NRTPSEQNVNCTNSVDLENSGIIENHILSYEDFTKDRKFVALEAEVKR 424
N V N N E +V ++ L N+ ++E + + + T + L ++
Sbjct: 252 ---NVVTYNVLINSMCKEGSVK--EAMSLRNN-MLEKGV-ALDAVTYNTLITGLSGVLE- 303
Query: 425 VLQTLLGMLQKQVELITTEHG--ILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENL 482
+ +G+L++ + HG +++P + ++ + G+ ++ F ++
Sbjct: 304 -MDEAMGLLEEMI------HGETMVEPNVVTFNSVIHGLCKTGRMRQ--AFQVR------ 348
Query: 483 QVSHDDAALGHVITLCISLGWLDQAH------DLLDEMHLAGVRASSSVYASLLKAYIEA 536
+ ++ +++T + +G L + H +L+DEM +G+ S Y+ L+ + +
Sbjct: 349 DMMAENGCACNLVTFNLLIGGLLRVHKVKKAMELMDEMASSGLEPDSFTYSILINGFCKM 408
Query: 537 NRPREVTALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEM-KESKIPRSGHQ 595
+ +LL R GI+ + Y LL + Q A + F EM K K+
Sbjct: 409 WQVDRAESLLSKMRRDGIEPELVHYIPLLAALCEQGMMEQARNFFDEMHKNCKLDVVA-- 466
Query: 596 EFEMLVKGCAQNHEAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKR 655
+ ++ G + + + L+ + + I V ++ +I+ F + AE+ LK+
Sbjct: 467 -YSTMIHGACRLRDRKSAEEFLKHMLDEGLIPDSV-TYSMLINMFANSGDLGAAERVLKQ 524
Query: 656 MRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTF 715
M + G +P+ F S++ GY A G +V EL EM ++ + D +++ ++
Sbjct: 525 MTASGFVPDVAVFDSLIKGYGA-KGDTEKVLELIREM----TAKDIALDSKIISTIYTCL 579
Query: 716 V 716
V
Sbjct: 580 V 580
>gi|242051194|ref|XP_002463341.1| hypothetical protein SORBIDRAFT_02g042040 [Sorghum bicolor]
gi|241926718|gb|EER99862.1| hypothetical protein SORBIDRAFT_02g042040 [Sorghum bicolor]
Length = 405
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 69/155 (44%), Gaps = 8/155 (5%)
Query: 609 EAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTF 668
E+ L+A++LQ + V D+ +IH + K++L+Q AE A M+ G P Q
Sbjct: 131 ESPLLAEVLQHALLENSFEANVRDYTKLIHIYGKQKLLQKAEDAFAAMKGRG-FPCDQVM 189
Query: 669 HSMVTGYAAIGGKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVV 728
+ + + G T E++ E+ + D+ S++ ++R A ++
Sbjct: 190 LTALMDMYSKAGDLTRAKEIFREIVLLG----LPLDKRAYGSMIMAYIRADMLQEAEGLI 245
Query: 729 AMMEEGKMFIDKYKYRTLFLKYHKTLYKGKTPKFQ 763
ME+ +MF K Y+ L Y Y+G + Q
Sbjct: 246 KEMEDQQMFAGKEVYKALLRAYS---YRGDSDGAQ 277
>gi|357499681|ref|XP_003620129.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495144|gb|AES76347.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 543
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 58/307 (18%), Positives = 120/307 (39%), Gaps = 13/307 (4%)
Query: 447 LQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQ 506
+ P Y L+ F G+ K+ K EN++ D ++ G + +
Sbjct: 228 ISPNVVTYSALISGFFTVGQLKDAIDLFNKMILENIK--PDVYTFNILVDGFCKDGKMKE 285
Query: 507 AHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQ 566
+ M G++ + Y SL+ Y + ++L G+ D Y L+
Sbjct: 286 GKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKEVNKAKSILYTMSQRGVNPDIQSYNILID 345
Query: 567 SKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRI 626
K A++LFKEM I + L+ G + + KL+ E+ + + +
Sbjct: 346 GFCKIKKVDEAMNLFKEMHHKHIIPDV-VTYNSLIDGLCKLGKISYALKLVDEMHD-RGV 403
Query: 627 DCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVT 686
+ +++++ CK + A L +++ G PN T+ ++ G GG+ +
Sbjct: 404 PPDIITYSSILDALCKNHQVDKAIALLTKLKDQGIRPNMYTYTILIDGLCK-GGRLEDAH 462
Query: 687 ELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFIDKYKY--- 743
++ ++ + ++N +++ F G F A +++ M++ D Y
Sbjct: 463 NIFEDLLVKGYNITVN----TYTVMIHGFCNKGLFDEALALLSKMKDNSCIPDAVTYEII 518
Query: 744 -RTLFLK 749
R+LF K
Sbjct: 519 IRSLFDK 525
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 104/526 (19%), Positives = 193/526 (36%), Gaps = 99/526 (18%)
Query: 182 VPASTILRKLVATEQYPPVTAWSAILAHM-------SLTAPGAYLAAELILEIGYLFQDG 234
V A ++ +L+ PP ++ IL + ++ + + E I + + FQ
Sbjct: 58 VDAFSLFSRLLRQNPTPPAIEFNKILGSLVKSKHYHTVLSLSQQMEFEGINPVLFHFQH- 116
Query: 235 RVDPRKKCNAPLIAMKPNTNTFNIALAGCLLFETTRKAEQLLDIMPRIGVKADSNLLIIM 294
P + L+ PNT TF + G L +A D + +G + D +
Sbjct: 117 ---PHQ-----LMGYHPNTITFTTLIKGLCLKGQIHQALLFHDNVVAMGFQLDQVGYGTL 168
Query: 295 AHIYERNGRREELRKLQRHIDEAVNLSDIQFRQFYNCLLSCHLKFGDLNSASKMVLEMLQ 354
H + G L R +D + ++ Y+ ++ K +N A + EM+
Sbjct: 169 IHGLCKVGETRAALDLLRRVDGNLVQPNVVM---YSTIIDGMCKDKHVNDAFDLYSEMVS 225
Query: 355 RAKEARNSLAAAMLP-FNAVGVNNRTPSEQNVNCTNSVDLENSGIIEN--------HILS 405
+ +A++ F VG +++DL N I+EN +IL
Sbjct: 226 KGISPNVVTYSALISGFFTVG-----------QLKDAIDLFNKMILENIKPDVYTFNILV 274
Query: 406 YEDFTKDRKF--------VALEAEVKRVLQTLLGMLQ-----------KQVELITTEHGI 446
+ F KD K + ++ +K + T ++ K + ++ G+
Sbjct: 275 -DGFCKDGKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKEVNKAKSILYTMSQRGV 333
Query: 447 LQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQ 506
P + Y L+ F + K E + E + + D +I LG +
Sbjct: 334 -NPDIQSYNILIDGFCKIKKVDEAMNLF--KEMHHKHIIPDVVTYNSLIDGLCKLGKISY 390
Query: 507 AHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQ 566
A L+DEMH GV Y+S+L A + ++ + ALL + GI+ + Y L+
Sbjct: 391 ALKLVDEMHDRGVPPDIITYSSILDALCKNHQVDKAIALLTKLKDQGIRPNMYTYTILID 450
Query: 567 SKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRI 626
A ++F+ ++LVKG
Sbjct: 451 GLCKGGRLEDAHNIFE---------------DLLVKG----------------------Y 473
Query: 627 DCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMV 672
+ V+ + +IH FC K L +A L +M+ +P+A T+ ++
Sbjct: 474 NITVNTYTVMIHGFCNKGLFDEALALLSKMKDNSCIPDAVTYEIII 519
>gi|2244996|emb|CAB10416.1| salt-inducible protein homolog [Arabidopsis thaliana]
gi|7268388|emb|CAB78681.1| salt-inducible protein homolog [Arabidopsis thaliana]
Length = 777
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 51/241 (21%), Positives = 102/241 (42%), Gaps = 7/241 (2%)
Query: 448 QPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQA 507
+P ++ A+ AG +A E ++ D +I + G D
Sbjct: 317 EPDNVTMAAMIDAYGRAGNVDMALSLYDRARTEKWRI--DAVTFSTLIRIYGVSGNYDGC 374
Query: 508 HDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQS 567
++ +EM GV+ + +Y L+ + A RP + + +D + G + S Y AL+++
Sbjct: 375 LNIYEEMKALGVKPNLVIYNRLIDSMGRAKRPWQAKIIYKDLITNGFTPNWSTYAALVRA 434
Query: 568 KIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRID 627
+ AL +++EMKE + + + L+ CA N ++ Q++K + D
Sbjct: 435 YGRARYGDDALAIYREMKEKGLSLTVIL-YNTLLSMCADNRHVDEAFEIFQDMKNCETCD 493
Query: 628 CGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTE 687
++++I + + AE AL ++R G P S++ Y GK +V +
Sbjct: 494 PDSWTFSSLITVYACSGRVSKAEAALLQIREAGFEPTLFVLTSVIQCY----GKAKQVDD 549
Query: 688 L 688
+
Sbjct: 550 V 550
Score = 39.7 bits (91), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 33/159 (20%), Positives = 65/159 (40%), Gaps = 1/159 (0%)
Query: 506 QAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALL 565
QA + ++ G + S YA+L++AY A + A+ R+ + G+ L Y LL
Sbjct: 408 QAKIIYKDLITNGFTPNWSTYAALVRAYGRARYGDDALAIYREMKEKGLSLTVILYNTLL 467
Query: 566 QSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQR 625
+ A +F++MK + F L+ A + L +++E
Sbjct: 468 SMCADNRHVDEAFEIFQDMKNCETCDPDSWTFSSLITVYACSGRVSKAEAALLQIREAG- 526
Query: 626 IDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPN 664
+ + +VI + K + + D + ++ LG P+
Sbjct: 527 FEPTLFVLTSVIQCYGKAKQVDDVVRTFDQVLELGITPD 565
>gi|357499719|ref|XP_003620148.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|217074978|gb|ACJ85849.1| unknown [Medicago truncatula]
gi|355495163|gb|AES76366.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 465
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 51/222 (22%), Positives = 85/222 (38%), Gaps = 39/222 (17%)
Query: 447 LQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQ 506
+ P Y L+ F GK K+ K EN++ D ++ + G +
Sbjct: 258 ISPNVVTYSALISGFFTVGKLKDAVDLFNKMISENIK--PDVYTFNILVDVFCKSGKISY 315
Query: 507 AHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQ 566
A L+DEMH G + Y+S+L A + +R + ALL + GI+ + Y L+
Sbjct: 316 ALKLVDEMHDRGQPPNIVTYSSILDALCKTHRVDKAVALLTKLKDQGIRPNMHTYTILID 375
Query: 567 SKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRI 626
A ++F+++ LVKG
Sbjct: 376 GLCTSGKLEDARNIFEDL---------------LVKG----------------------Y 398
Query: 627 DCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTF 668
D V + + + FCKK L +A L +M G +P+A+T+
Sbjct: 399 DITVVTYIVMFYGFCKKGLFDEASALLSKMEENGCIPDAKTY 440
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 60/308 (19%), Positives = 122/308 (39%), Gaps = 15/308 (4%)
Query: 448 QPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQA 507
P + L+K G+ + +F K Q + + G +I +G A
Sbjct: 154 NPNTITFTTLIKGLCLKGQIHQALNFHDKLVALGFQFNQ--ISYGTLIDGLCKVGETRAA 211
Query: 508 HDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQS 567
DLL + V+ + +Y++++ + + L + S GI + Y AL+
Sbjct: 212 LDLLRRVDGKLVQPNVVMYSTIIDGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISG 271
Query: 568 KIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKE-GQRI 626
A+ LF +M I + F +LV ++ + KL+ E+ + GQ
Sbjct: 272 FFTVGKLKDAVDLFNKMISENI-KPDVYTFNILVDVFCKSGKISYALKLVDEMHDRGQPP 330
Query: 627 DCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVT 686
+ + +++++ CK + A L +++ G PN T+ ++ G GK +
Sbjct: 331 N--IVTYSSILDALCKTHRVDKAVALLTKLKDQGIRPNMHTYTILIDGLCT-SGKLEDAR 387
Query: 687 ELWGEMKSFASSTSMNFDEELLDSVL--YTFVRGGFFARANEVVAMMEEGKMFIDKYKYR 744
++ ++ +D ++ ++ Y F + G F A+ +++ MEE D Y
Sbjct: 388 NIFEDL------LVKGYDITVVTYIVMFYGFCKKGLFDEASALLSKMEENGCIPDAKTYE 441
Query: 745 TLFLKYHK 752
+ L K
Sbjct: 442 LIKLSLFK 449
>gi|42408237|dbj|BAD09394.1| putative PPR protein [Oryza sativa Japonica Group]
gi|215678545|dbj|BAG92200.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 624
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 57/251 (22%), Positives = 102/251 (40%), Gaps = 8/251 (3%)
Query: 443 EHGILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLG 502
HG+ +P Y L+ + GK+ E K + D G ++ + G
Sbjct: 305 RHGV-EPDVVTYTALMDYLCKNGKSTEARKIFDSLVKRGHK--PDSTTYGTLLHGYATEG 361
Query: 503 WLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYE 562
L + HDLLD M G++ ++ ++ AY + N+ E + + R G+ D Y
Sbjct: 362 ALVEMHDLLDLMMKKGMQLGHHIFNMIMGAYAKHNKVDEALLVFSNMRQQGLNPDIVNYG 421
Query: 563 ALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKG-CAQNHEAGLMAKLLQEVK 621
+L AL F +K + + F L+ G C + + + +
Sbjct: 422 TVLDILCTAGRVDDALSQFNSLKSEGLAPN-IVVFTTLIHGLCTCDKWDKVEELAFEMID 480
Query: 622 EGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGK 681
G +D +N ++ CKK + +A+ M +G PN T+++++ GY + GK
Sbjct: 481 RGICLDTIF--FNAIMGNLCKKGRVIEAKNLFDLMVRIGIEPNTNTYNTLIDGY-CLDGK 537
Query: 682 YTEVTELWGEM 692
E +L G M
Sbjct: 538 MDEAMKLLGVM 548
Score = 47.4 bits (111), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 53/281 (18%), Positives = 106/281 (37%), Gaps = 40/281 (14%)
Query: 504 LDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEA 563
+D+A + M GV +Y SL+ Y + +P+E + + G++ D Y A
Sbjct: 258 MDKATQVFTRMVKNGVMPDCIMYTSLVHGYCSSGKPKEAIGIFKKMCRHGVEPDVVTYTA 317
Query: 564 LLQ---------------SKIVQKD----------------TPGAL---HLFKEMKESKI 589
L+ +V++ T GAL H ++ K
Sbjct: 318 LMDYLCKNGKSTEARKIFDSLVKRGHKPDSTTYGTLLHGYATEGALVEMHDLLDLMMKKG 377
Query: 590 PRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDA 649
+ GH F M++ A++++ + +++ Q ++ + ++ V+ C + DA
Sbjct: 378 MQLGHHIFNMIMGAYAKHNKVDEALLVFSNMRQ-QGLNPDIVNYGTVLDILCTAGRVDDA 436
Query: 650 EKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEMKSFASSTSMNFDEELLD 709
++S G PN F +++ G K+ +V EL EM + D +
Sbjct: 437 LSQFNSLKSEGLAPNIVVFTTLIHGLCTC-DKWDKVEELAFEM----IDRGICLDTIFFN 491
Query: 710 SVLYTFVRGGFFARANEVVAMMEEGKMFIDKYKYRTLFLKY 750
+++ + G A + +M + + Y TL Y
Sbjct: 492 AIMGNLCKKGRVIEAKNLFDLMVRIGIEPNTNTYNTLIDGY 532
Score = 46.6 bits (109), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 90/219 (41%), Gaps = 30/219 (13%)
Query: 489 AALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPRE-VTALLR 547
A G VI C LG LD A + + G+R S +++ LLK + R + + +LR
Sbjct: 100 ATYGIVIGCCRRLGRLDLAFATVGRVITTGLRMSPILFSPLLKGLCDRRRTSDAMDIVLR 159
Query: 548 DARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQN 607
G + D Y LL+ K + AL L M + K G +++ N
Sbjct: 160 RMPELGCKPDLFSYTILLKGLCDDKTSQQALDLLHIMADHK----GRCPLDVVAYTTVIN 215
Query: 608 HEAGLMAKLLQEVKEGQ----------RIDCG----VHDWNNVIHFFCKKRLMQDAEKAL 653
GL+ +EGQ +D G V ++++I K + M A +
Sbjct: 216 ---GLL-------REGQLDKAYSLFDAMLDRGPSPDVVTYSSIISALSKTQAMDKATQVF 265
Query: 654 KRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEM 692
RM G +P+ + S+V GY + GK E ++ +M
Sbjct: 266 TRMVKNGVMPDCIMYTSLVHGYCS-SGKPKEAIGIFKKM 303
Score = 41.6 bits (96), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 53/109 (48%), Gaps = 5/109 (4%)
Query: 247 IAMKPNTNTFNIALAGCLLFETTRKAEQLLDIMPRIGVKADSNLLIIMAHIYERNGRREE 306
I ++PNTNT+N + G L +A +LL +M GVK + + Y +NGR E+
Sbjct: 516 IGIEPNTNTYNTLIDGYCLDGKMDEAMKLLGVMVFNGVKPSDVTYNTIINGYSQNGRIED 575
Query: 307 LRKLQRHID-EAVNLSDIQFRQFYNCLLSCHLKFGDLNSASKMVLEMLQ 354
L R +D + VN + Y LL + G +A ++ L M++
Sbjct: 576 GLTLLREMDGKGVNPGIVT----YEMLLQGLFQAGRTVAAKELYLRMIK 620
>gi|242070261|ref|XP_002450407.1| hypothetical protein SORBIDRAFT_05g004830 [Sorghum bicolor]
gi|241936250|gb|EES09395.1| hypothetical protein SORBIDRAFT_05g004830 [Sorghum bicolor]
Length = 462
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 72/308 (23%), Positives = 117/308 (37%), Gaps = 63/308 (20%)
Query: 502 GWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCY 561
GWLD+A ++ + G+ Y +LL A+ A++ R AG++ DA Y
Sbjct: 26 GWLDRAESVVVDAIRLGLPPDVVTYNTLLAAHCRVAGLDAGIAVVHRMREAGVRPDAVTY 85
Query: 562 EALLQSKIVQKDTPGALHLFKEMKESKIP--------------RSGHQEF------EMLV 601
+L+ T AL LF EM S + RSGH E +M
Sbjct: 86 NSLITGADRSGLTVRALDLFDEMLRSGVAPDSWSYNALMHCLFRSGHPEHAYRVFADMAD 145
Query: 602 KG---CAQNH--------EAGLMAKLLQEVKEGQR--IDCGVHDWNNVIHFFCKKRLMQD 648
KG CA + +AG + + QR + G+ +N +I+ CK +
Sbjct: 146 KGVAPCATTYNTLLDGLFKAGHATNAYRMFRYLQRAGLPVGIVTYNTMINGLCKSGKVGY 205
Query: 649 AEKALKRMRSLGHLPNAQTFHSMVT---------------------GYAAIGGKYTEVTE 687
A LK + H PNA T+ +++ GY + YT V
Sbjct: 206 ARMVLKELGRTEHAPNAVTYTTVMKCCFRYGRFEQGLETFLSLLEGGYISDAFPYTTVIS 265
Query: 688 LW---GEMKSFASSTSM------NFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFI 738
G M+ + + D +++++ + G A E++ MMEEG +
Sbjct: 266 ALVKKGRMQEANTYCELMIQSGSTLDNACYNTLIHLRCQEGKIDDAFELLNMMEEGGLES 325
Query: 739 DKYKYRTL 746
D+Y + L
Sbjct: 326 DEYTFSIL 333
>gi|262316881|emb|CAZ44330.1| homologue to restoring pentatricopeptide repeat protein [Raphanus
sativus]
Length = 686
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 89/199 (44%), Gaps = 12/199 (6%)
Query: 504 LDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEA 563
+D LL EM AG+ A++ Y +L+ + + LL++ S+G+ +
Sbjct: 409 VDDGIKLLHEMTEAGLVANTITYTTLIHGFCQVGDLNAAQDLLQEMISSGVCPNVVTCNT 468
Query: 564 LLQSKIVQKDTPGALHLFKEMKESKI------PRSG----HQEFEMLVKGCAQNHEAGLM 613
LL AL +FK M++SK+ P +G Q + +L+ G N L
Sbjct: 469 LLDGLCDNGKLKDALEMFKAMQKSKMDIDASRPFNGVEPDVQTYNILICGLI-NEGKFLE 527
Query: 614 AKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVT 673
A+ L E + I ++++I CK+ + +A + M S P+ TF++++T
Sbjct: 528 AEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPDVVTFNTLIT 587
Query: 674 GYAAIGGKYTEVTELWGEM 692
GY G + EL+ EM
Sbjct: 588 GYCK-AGMVDDGLELFCEM 605
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 88/205 (42%), Gaps = 9/205 (4%)
Query: 497 LCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQL 556
LC+ + +A DL +M + + + +L+ R E ALL G+Q
Sbjct: 161 LCVE-DRISEALDLFHQM----CKPNVVTFTTLMNGLCREGRVVEAVALLDRMLEDGLQP 215
Query: 557 DASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKL 616
+ Y ++ DT AL+L ++M+E + ++ G ++ L
Sbjct: 216 NQITYGTIVDGMCKMGDTVSALNLLRKMEEVSHIIPNVVIYNTIIDGLWKDGRHSDAHNL 275
Query: 617 LQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYA 676
E++E + I + +N +I+ FC DAE+ L+ M P+ TF +++ +
Sbjct: 276 FIEMQE-KEIFPDIVTYNCMINGFCISGRWSDAEQLLQEMLERKINPDVVTFSALINAFV 334
Query: 677 AIGGKYTEVTELWGEM--KSFASST 699
GK+ E EL+ EM +S ST
Sbjct: 335 K-EGKFFEAEELYDEMLPRSIIPST 358
Score = 48.5 bits (114), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 53/255 (20%), Positives = 98/255 (38%), Gaps = 16/255 (6%)
Query: 449 PTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQAH 508
P Y ++ F +G+ + L E +++ D +I + G +A
Sbjct: 286 PDIVTYNCMINGFCISGRWSDAEQLL--QEMLERKINPDVVTFSALINAFVKEGKFFEAE 343
Query: 509 DLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSK 568
+L DEM + S+ Y+S++ + + NR + + G D + L+
Sbjct: 344 ELYDEMLPRSIIPSTVTYSSMIDGFCKQNRLDAAEHMFYLTPTKGCSPDIITFNTLIAGY 403
Query: 569 IVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRIDC 628
K + L EM E+ + + + L+ G Q + LLQE+ +
Sbjct: 404 CRAKRVDDGIKLLHEMTEAGL-VANTITYTTLIHGFCQVGDLNAAQDLLQEMIS-SGVCP 461
Query: 629 GVHDWNNVIHFFCKKRLMQDAEKALKRMRSL-----------GHLPNAQTFHSMVTGYAA 677
V N ++ C ++DA + K M+ G P+ QT++ ++ G
Sbjct: 462 NVVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDIDASRPFNGVEPDVQTYNILICGLIN 521
Query: 678 IGGKYTEVTELWGEM 692
GK+ E EL+ EM
Sbjct: 522 -EGKFLEAEELYEEM 535
>gi|403366299|gb|EJY82949.1| hypothetical protein OXYTRI_19434 [Oxytricha trifallax]
Length = 1420
Score = 56.6 bits (135), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 90/456 (19%), Positives = 178/456 (39%), Gaps = 70/456 (15%)
Query: 248 AMKPNTNTFNIALAGCLLFETTRKAEQLLDIMPRIGVKADS---NLLI--IMAHIYERNG 302
+KPN T+N + C+ A QLL M + + D+ + LI I A +NG
Sbjct: 614 CLKPNDVTYNSLIDACVRCNRLNSAWQLLSEMQQNNIVPDNFTYSTLIKGIRAENQSQNG 673
Query: 303 --------RREELRKLQRHIDEAVNLSDIQFRQFYNCLLSCHLKFGDLNSASKMVLEM-- 352
+ L + + + V +I YNCL+ ++F D+N A + EM
Sbjct: 674 ISNPMDLEKAFALLEQMKQSNGGVKPDEI----LYNCLIDACVRFHDVNRAVAVFQEMQF 729
Query: 353 ------------LQRAKEARNSLAAAMLPFNAVGVNNRTPSEQNVNCTNSVDLENSGIIE 400
L +A + N L A F + N P+ C ++N+
Sbjct: 730 SNIKPSSVTYGILIKAYGSANQLDNAFFVFKKMKDNCLIPNSVTYGCLIDACVKNN---- 785
Query: 401 NHILSYEDFTKDRKFVALEAEVKRVLQTLLGMLQKQVELITTEHGILQPTEKIYIKLVKA 460
+++R ++ M + V+L T I+ L+K
Sbjct: 786 --------------------QIERAMEVFETMKRDGVQLNTI----------IFTTLIKG 815
Query: 461 FLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQAHDLLDEMH--LAG 518
F ++ K + + + K + ++ ++ +I CI + +A ++ +EM ++
Sbjct: 816 FAKSFKLDQALE-VYQIMKMDDKIKPNNVTFNSLIDCCIRCNSIKKAMEIFEEMKQPISH 874
Query: 519 VRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQKDTPGAL 578
+ Y++++K + ++ +L D I D Y +LL + AL
Sbjct: 875 TKPDLITYSTMIKGFCREKNIQQALIMLNDMEKNNIMADEVLYNSLLDGCCKANEIEMAL 934
Query: 579 HLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRIDCGVHDWNNVIH 638
++K M+ KI + + + +L+K + +L+E+K+ I G+ + ++
Sbjct: 935 KVYKNMEILKI-KPSNVTYSILIKIYGKQRNLPKALGVLEEMKKD-GIRPGLIVYTCLLQ 992
Query: 639 FFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTG 674
K R ++ AE+ MR G + T+ +M+ G
Sbjct: 993 TCIKSRQLKTAEQLFHDMRIQGIRGDQLTYQTMING 1028
Score = 47.8 bits (112), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 51/241 (21%), Positives = 105/241 (43%), Gaps = 26/241 (10%)
Query: 442 TEHGILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISL 501
+++GI P + L KAF L + ++ N V D+ +I C+
Sbjct: 670 SQNGISNP-----MDLEKAFA----------LLEQMKQSNGGVKPDEILYNCLIDACVRF 714
Query: 502 GWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCY 561
+++A + EM + ++ SS Y L+KAY AN+ + + + + ++ Y
Sbjct: 715 HDVNRAVAVFQEMQFSNIKPSSVTYGILIKAYGSANQLDNAFFVFKKMKDNCLIPNSVTY 774
Query: 562 EALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQ----EFEMLVKGCAQNHEAGLMAKLL 617
L+ + + A+ +F+ MK R G Q F L+KG A++ + ++
Sbjct: 775 GCLIDACVKNNQIERAMEVFETMK-----RDGVQLNTIIFTTLIKGFAKSFKLDQALEVY 829
Query: 618 QEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRS-LGHL-PNAQTFHSMVTGY 675
Q +K +I +N++I + ++ A + + M+ + H P+ T+ +M+ G+
Sbjct: 830 QIMKMDDKIKPNNVTFNSLIDCCIRCNSIKKAMEIFEEMKQPISHTKPDLITYSTMIKGF 889
Query: 676 A 676
Sbjct: 890 C 890
Score = 45.1 bits (105), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 94/495 (18%), Positives = 195/495 (39%), Gaps = 85/495 (17%)
Query: 255 TFNIALAGCLLFETTRKAEQLLDIMPRIGVKADSNLLIIMAHIYERNGRREELRK----L 310
TF+ + G + +A +L IM G+K D ++ I + + ++ K
Sbjct: 368 TFSCMIKGYCRAQRLPQALNVLSIMKERGIKPDE---VLYNSIIDGCSKNNQIAKAFLLY 424
Query: 311 QRHIDEAVNLSDIQFRQFYNCLLSCHLKFGDLNSASKMVLEMLQRAKEARNSLAAAMLPF 370
+ E V + I F N L+ C ++ G+ + A +++ +M ++ + N + + F
Sbjct: 425 DEMLGEGVTPTTITF----NSLIDCCVRSGNQDQAWRVLEQMKEKQVKPDNYTYSTL--F 478
Query: 371 NAVGVNNRTPSEQNVNCTNSVDLENSGIIENHILSYEDFTKDRKF--VALEAEVK----- 423
+ N+ DLE + ++ N + + DFT D V L+A +
Sbjct: 479 KGIKSENQRQ-----------DLEKAFVLYNQLQNSNDFTPDEILFNVLLDACINCKQLD 527
Query: 424 ---RVLQTLLGMLQKQVELITTE--------------------------HGILQPTEKIY 454
+ + L Q Q+++ T+ H ++P E +
Sbjct: 528 RAVELFKQLKPQSQPQIQVSNTDDADNSLSLEDSPDSAKNAPAVVNSSNHHFMRPDEISF 587
Query: 455 IKLVKAFLEAGKTK---ELTHFL-IKAEKENLQVSHDDAALGHVITLCISLGWLDQAHDL 510
++K + K + E+ + + ++ K N D +I C+ L+ A L
Sbjct: 588 NTIIKGCAQEKKLQLAFEMFNLMKMQCLKPN------DVTYNSLIDACVRCNRLNSAWQL 641
Query: 511 LDEMHLAGVRASSSVYASLLKAYIEANRPR----------EVTALLRDAR--SAGIQLDA 558
L EM + + Y++L+K N+ + + ALL + + G++ D
Sbjct: 642 LSEMQQNNIVPDNFTYSTLIKGIRAENQSQNGISNPMDLEKAFALLEQMKQSNGGVKPDE 701
Query: 559 SCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQ 618
Y L+ + + D A+ +F+EM+ S I S + +L+K ++ + +
Sbjct: 702 ILYNCLIDACVRFHDVNRAVAVFQEMQFSNIKPSS-VTYGILIKAYGSANQLDNAFFVFK 760
Query: 619 EVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAI 678
++K+ I V + +I K ++ A + + M+ G N F +++ G+A
Sbjct: 761 KMKDNCLIPNSV-TYGCLIDACVKNNQIERAMEVFETMKRDGVQLNTIIFTTLIKGFAK- 818
Query: 679 GGKYTEVTELWGEMK 693
K + E++ MK
Sbjct: 819 SFKLDQALEVYQIMK 833
Score = 43.9 bits (102), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 40/200 (20%), Positives = 80/200 (40%), Gaps = 12/200 (6%)
Query: 448 QPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQA 507
+P Y ++K F ++ L EK N+ D+ ++ C ++ A
Sbjct: 876 KPDLITYSTMIKGFCREKNIQQALIMLNDMEKNNIMA--DEVLYNSLLDGCCKANEIEMA 933
Query: 508 HDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQS 567
+ M + ++ S+ Y+ L+K Y + + +L + + GI+ Y LLQ+
Sbjct: 934 LKVYKNMEILKIKPSNVTYSILIKIYGKQRNLPKALGVLEEMKKDGIRPGLIVYTCLLQT 993
Query: 568 KIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKE----- 622
I + A LF +M+ I R ++ ++ GC + + + LL++ +
Sbjct: 994 CIKSRQLKTAEQLFHDMRIQGI-RGDQLTYQTMINGCLYSQKFDSILILLKDASDSKVQL 1052
Query: 623 ----GQRIDCGVHDWNNVIH 638
Q I ++ WN H
Sbjct: 1053 PHELSQNILTELNKWNTDNH 1072
Score = 40.4 bits (93), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 60/343 (17%), Positives = 138/343 (40%), Gaps = 65/343 (18%)
Query: 251 PNTNTFNIALAGCLLFETTRKAEQLLDIMPRIGVKADSNLLIIMAHIYERNGRREELRKL 310
PN+ T+ + C+ +A ++ + M R GV+ ++ + + + ++ + ++ ++
Sbjct: 769 PNSVTYGCLIDACVKNNQIERAMEVFETMKRDGVQLNTIIFTTLIKGFAKSFKLDQALEV 828
Query: 311 QR--HIDEAVNLSDIQFRQFYNCLLSCHLKFGDLNSASKMVLEMLQRAKEARNSLAAAML 368
+ +D+ + +++ F +C + C+ + K +E+ + K+ + ++
Sbjct: 829 YQIMKMDDKIKPNNVTFNSLIDCCIRCN--------SIKKAMEIFEEMKQPISHTKPDLI 880
Query: 369 PFNAV--GVNNRTPSEQNVNCTNSVDLENSGIIENHILSYEDFTKDRKFVALEAEVKRVL 426
++ + G +Q + N D+E + I+ + +L K +E +K
Sbjct: 881 TYSTMIKGFCREKNIQQALIMLN--DMEKNNIMADEVLYNSLLDGCCKANEIEMALK--- 935
Query: 427 QTLLGMLQKQVELITTEHGILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSH 486
+ K +E++ ++P+ Y L+K + GK + L
Sbjct: 936 ------VYKNMEILK-----IKPSNVTYSILIKIY---GKQRNLP--------------- 966
Query: 487 DDAALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALL 546
ALG +L+EM G+R VY LL+ I++ + + L
Sbjct: 967 --KALG-----------------VLEEMKKDGIRPGLIVYTCLLQTCIKSRQLKTAEQLF 1007
Query: 547 RDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKI 589
D R GI+ D Y+ ++ + + L L K+ +SK+
Sbjct: 1008 HDMRIQGIRGDQLTYQTMINGCLYSQKFDSILILLKDASDSKV 1050
>gi|15235161|ref|NP_195672.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75266408|sp|Q9SV96.1|PP358_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g39620, chloroplastic; AltName: Full=Protein EMBRYO
DEFECTIVE 2453; Flags: Precursor
gi|5042178|emb|CAB44697.1| putative protein [Arabidopsis thaliana]
gi|7270946|emb|CAB80625.1| putative protein [Arabidopsis thaliana]
gi|58013022|gb|AAW62964.1| chloroplast embryo-defective 2453 [Arabidopsis thaliana]
gi|332661694|gb|AEE87094.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 563
Score = 56.6 bits (135), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 64/318 (20%), Positives = 135/318 (42%), Gaps = 32/318 (10%)
Query: 449 PTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCI----SLGWL 504
P +Y KL+ + G+T+ + +L +E +N D + +IT + L
Sbjct: 131 PDNGVYSKLISVMGKKGQTR-MAMWLF-SEMKNSGCRPDASVYNALITAHLHTRDKAKAL 188
Query: 505 DQAHDLLDEMH-LAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEA 563
++ LD+M + + + Y LL+A+ ++ + +V AL +D + + D +
Sbjct: 189 EKVRGYLDKMKGIERCQPNVVTYNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYTFNG 248
Query: 564 LLQSKIVQKDTPGALHLFKEMKESKIPRSGHQE-------FEMLVKGCAQNHEAGLMAKL 616
++ D G + KEM E+ + R E F +L+ + E M +
Sbjct: 249 VM-------DAYGKNGMIKEM-EAVLTRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQT 300
Query: 617 LQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVT--G 674
+ + + + +N++I + K R++ AE K+M + ++P+ T+ M+ G
Sbjct: 301 FKSLMRSKEKPT-LPTFNSMIINYGKARMIDKAEWVFKKMNDMNYIPSFITYECMIMMYG 359
Query: 675 YAAIGGKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEG 734
Y + E+ E GE ++++N ++L + R G + A+++
Sbjct: 360 YCGSVSRAREIFEEVGESDRVLKASTLN-------AMLEVYCRNGLYIEADKLFHNASAF 412
Query: 735 KMFIDKYKYRTLFLKYHK 752
++ D Y+ L+ Y K
Sbjct: 413 RVHPDASTYKFLYKAYTK 430
>gi|410110123|gb|AFV61141.1| pentatricopeptide repeat-containing protein 123, partial [Lippia
macrophylla]
Length = 381
Score = 56.6 bits (135), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 52/255 (20%), Positives = 117/255 (45%), Gaps = 25/255 (9%)
Query: 447 LQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQ---VSHDDAALGHVITLCISLGW 503
++P Y L++ + +A E H +++N++ V+++ + + TL
Sbjct: 140 IEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMIMIYGKTL-----E 194
Query: 504 LDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEA 563
++A++L+ EM G+ +S Y++++ + + + L + RS+G+++D +
Sbjct: 195 HEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEID----QI 250
Query: 564 LLQSKIVQKDTPG----ALHLFKEMKE-SKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQ 618
L Q+ IV + G A L E+K IPR ++ G + EA + + Q
Sbjct: 251 LFQTMIVAYERAGLVAHAKRLLHELKRPDNIPRDTAIH---ILAGAGRIEEATYVFR--Q 305
Query: 619 EVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAI 678
+ G+ D V + +IH K + + + +MR LG+ P++ ++ Y +
Sbjct: 306 AIDAGEVKDITV--FERMIHLLSKXKKYSNVVEVFNKMRGLGYFPDSDVIAXVLNAYGKL 363
Query: 679 GGKYTEVTELWGEMK 693
++ + +++ EM+
Sbjct: 364 -QEFDKANDVYMEMQ 377
Score = 46.2 bits (108), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 53/269 (19%), Positives = 113/269 (42%), Gaps = 38/269 (14%)
Query: 493 HVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSA 552
++I L L +A + + +G Y +++ + +A RE +L+ + ++A
Sbjct: 9 NLIELSRKLCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMKTA 68
Query: 553 GIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESK-------------------IPRSG 593
G+ + + Y LL + K AL +F EM+E K + +
Sbjct: 69 GVMPNTTSYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEA 128
Query: 594 HQEFEMLVK-GCAQN-----------HEAGLMAKLLQEVKEGQR--IDCGVHDWNNVIHF 639
+ F + K G N +A L + + + QR I+ V +N++I
Sbjct: 129 DKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMIMI 188
Query: 640 FCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEMKSFASST 699
+ K + A ++ M+S G PN+ T+ ++++ + + GK L+ +++ S+
Sbjct: 189 YGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKV-GKLDRAAMLFQKLR----SS 243
Query: 700 SMNFDEELLDSVLYTFVRGGFFARANEVV 728
+ D+ L +++ + R G A A ++
Sbjct: 244 GVEIDQILFQTMIVAYERAGLVAHAKRLL 272
>gi|224071479|ref|XP_002303480.1| predicted protein [Populus trichocarpa]
gi|222840912|gb|EEE78459.1| predicted protein [Populus trichocarpa]
Length = 836
Score = 56.6 bits (135), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 93/217 (42%), Gaps = 14/217 (6%)
Query: 504 LDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEA 563
+++ +LL+E+ + +S VY SL++AY L D +S G+ L + Y +
Sbjct: 622 VEEGENLLNELVSKKLELNSVVYNSLIRAYCINGNMNAAFRLRDDMKSRGVLLSCATYSS 681
Query: 564 LLQSKIVQKDTPGALHLFKEM-KESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKE 622
L+ A HL EM KE +P + ++ G ++ + + +LQE+
Sbjct: 682 LMHGLCNIGLVDDAKHLLDEMRKEGLLPNV--VCYTTIIGGYSKLGQMNKVNIVLQEMSS 739
Query: 623 GQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKY 682
I + +I FCK ++A K L M G LP+A T+++ G GK
Sbjct: 740 -HNIHPNKFTYTIMIDGFCKLGKTKEAAKLLNEMTEKGILPDAVTYNAFTNGLCK-EGKV 797
Query: 683 TEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGG 719
E ++ EM S A LD + YT + G
Sbjct: 798 EEAFKVCDEMSSGAVC---------LDEITYTTLIDG 825
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 52/241 (21%), Positives = 95/241 (39%), Gaps = 40/241 (16%)
Query: 454 YIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQAHDLLDE 513
Y L+ + GK KE F +K E + D ++ + +D+A L E
Sbjct: 539 YNTLISGCCKEGKVKE--GFELKEEMVKKGIQPDIYTFNLLLHGLCNADKIDEASRLWHE 596
Query: 514 MHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQKD 573
G + Y ++ Y +AN+ E LL + S ++L++ Y +L+++ + +
Sbjct: 597 CKKNGYVPNVYTYGVMIDGYCKANKVEEGENLLNELVSKKLELNSVVYNSLIRAYCINGN 656
Query: 574 TPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRIDCGVHDW 633
A L +MK + S CA +
Sbjct: 657 MNAAFRLRDDMKSRGVLLS-----------CAT--------------------------Y 679
Query: 634 NNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEMK 693
++++H C L+ DA+ L MR G LPN + +++ GY+ + G+ +V + EM
Sbjct: 680 SSLMHGLCNIGLVDDAKHLLDEMRKEGLLPNVVCYTTIIGGYSKL-GQMNKVNIVLQEMS 738
Query: 694 S 694
S
Sbjct: 739 S 739
Score = 48.1 bits (113), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 64/279 (22%), Positives = 110/279 (39%), Gaps = 36/279 (12%)
Query: 447 LQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQ 506
+ P Y ++ ++G+ E F K KE +VS I I L +D+
Sbjct: 287 VAPNVVTYNNIIHGLCKSGRLDEAYRFKEKMVKE--KVSPSLITYSVFINGLIKLEKIDE 344
Query: 507 AHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQ 566
A+ +L EM G + VY +L+ Y + E + D S GI ++ +L+Q
Sbjct: 345 ANCVLKEMSELGFVPNEVVYNTLIDGYCKMGNISEALKIRDDMLSKGISPNSVTLNSLIQ 404
Query: 567 SKIVQKDTPGALHLFKEMKESKIP--------------------RSGHQEFEMLVKGCAQ 606
A ++ +EM +P + H EML++
Sbjct: 405 GFCKSDQIGQAENVLEEMIGRGLPINQGSFSMVINWLCLKFRFVTALHFIREMLLRNLRP 464
Query: 607 NHE--AGLMAKLLQEVKEGQRID--C---------GVHDWNNVIHFFCKKRLMQDAEKAL 653
N L++ L + K+G+ ++ C + N +IH CK MQ+ K L
Sbjct: 465 NDGLLTTLVSGLCKAGKQGEAVELWCRLLGKGFVPNIVTSNALIHGLCKAGNMQETLKLL 524
Query: 654 KRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEM 692
+ M G + + T++++++G GK E EL EM
Sbjct: 525 RDMLERGLVFDRITYNTLISGCCK-EGKVKEGFELKEEM 562
Score = 40.8 bits (94), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 37/167 (22%), Positives = 68/167 (40%), Gaps = 3/167 (1%)
Query: 528 SLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKES 587
+L+ +A +E LLRD G+ D Y L+ + L +EM +
Sbjct: 506 ALIHGLCKAGNMQETLKLLRDMLERGLVFDRITYNTLISGCCKEGKVKEGFELKEEMVKK 565
Query: 588 KIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQ 647
I + F +L+ G + ++L E K+ + V+ + +I +CK ++
Sbjct: 566 GIQPDIYT-FNLLLHGLCNADKIDEASRLWHECKKNGYVP-NVYTYGVMIDGYCKANKVE 623
Query: 648 DAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEMKS 694
+ E L + S N+ ++S++ Y I G L +MKS
Sbjct: 624 EGENLLNELVSKKLELNSVVYNSLIRAY-CINGNMNAAFRLRDDMKS 669
>gi|357123530|ref|XP_003563463.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74850,
chloroplastic-like [Brachypodium distachyon]
Length = 862
Score = 56.6 bits (135), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 68/286 (23%), Positives = 108/286 (37%), Gaps = 48/286 (16%)
Query: 457 LVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQAHDLLDEMHL 516
L++A LEAG V D A+ H++ G L + +L EM
Sbjct: 267 LLRAMLEAG------------------VLPDTASYRHIVDAFARAGDLSRVAELFREMAD 308
Query: 517 AGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQKDTPG 576
G S Y L++A+ E A+LR ++ G A+ Y LL Q G
Sbjct: 309 TGHTPDPSAYLGLMEAHTRVGATAEAVAVLRQMQADGCAPTAATYRVLLDLYGRQGRFDG 368
Query: 577 ALHLFKEMKESKIPRSGHQE--FEMLVKGCAQNHEAGLMAKLLQ-------EVKEGQRID 627
LF+EM+ + P + F + G L +L+ E EG +
Sbjct: 369 VRELFREMRTAVPPDTATYNVLFSVFGDGGFFKEVVELFHDMLRTGIEPDMETCEGVLVA 428
Query: 628 CGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVT--GYAAIGGKYTEV 685
CG + L +DA + L + G +P A+ + +V G+AA+ Y E
Sbjct: 429 CG------------QGGLHEDAREVLDYITKEGMVPTAKAYTGLVEALGHAAM---YEEA 473
Query: 686 TELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMM 731
+ M S ++ E +S+ F +GG F A + + M
Sbjct: 474 YVAFNMMTEIGSLPTI----ETYNSLANVFAKGGLFQEAESIFSRM 515
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 57/238 (23%), Positives = 107/238 (44%), Gaps = 22/238 (9%)
Query: 505 DQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPR-------EVTALLRDARSAGIQLD 557
++A LLD+M AGV +++ Y ++L A A P + A +R S ++ D
Sbjct: 185 EEARALLDQMKAAGVAPTAATYNTVLAACARATDPPVPFDMLLGLFAEMRHDVSPAVRPD 244
Query: 558 ASCYEALLQSKIVQKDTPGALHLFKEMKESKI-PRSGHQEFEMLVKGCAQNHEAGLMAKL 616
+ Y LL + V+ A L + M E+ + P + + +V A+ + +A+L
Sbjct: 245 LTTYNTLLAAAAVRSLNDQAEMLLRAMLEAGVLPDTA--SYRHIVDAFARAGDLSRVAEL 302
Query: 617 LQEVKE-GQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGY 675
+E+ + G D + ++ + +A L++M++ G P A T+ ++ Y
Sbjct: 303 FREMADTGHTPDPSA--YLGLMEAHTRVGATAEAVAVLRQMQADGCAPTAATYRVLLDLY 360
Query: 676 AAIGGKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEE 733
G++ V EL+ EM+ T++ D + + F GGFF EVV + +
Sbjct: 361 GR-QGRFDGVRELFREMR-----TAVPPDTATYNVLFSVFGDGGFF---KEVVELFHD 409
>gi|242041853|ref|XP_002468321.1| hypothetical protein SORBIDRAFT_01g043770 [Sorghum bicolor]
gi|241922175|gb|EER95319.1| hypothetical protein SORBIDRAFT_01g043770 [Sorghum bicolor]
Length = 794
Score = 56.6 bits (135), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 53/251 (21%), Positives = 101/251 (40%), Gaps = 6/251 (2%)
Query: 502 GWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCY 561
G L +A LL M G+ + + Y +L+ AY ++ T ++ + G + D Y
Sbjct: 259 GMLGEARTLLARMKKEGIAPTRATYNTLVSAYARLGWIKQATNVVEAMTAFGFEPDLWTY 318
Query: 562 EALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVK 621
L A L EM+ I + LV C + + LL+E++
Sbjct: 319 NVLAAGLCQAGKVDEAFKLKDEMEHLSIVSPDVVTYNTLVDACFKYQRSSDALNLLEEMR 378
Query: 622 EGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGK 681
+ + + + N V+ C++ +++A LK M G P+ T+++++ Y K
Sbjct: 379 D-KGVKSSLVTHNIVVKGLCREGQLEEALGRLKMMTEEGLAPDVITYNTLIDAYC----K 433
Query: 682 YTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFIDKY 741
V + + M S + D L+++LY + + A E++ + D+
Sbjct: 434 ARNVAKAFVLMDEMVRS-GLKMDTFTLNTLLYNLCKEKRYEEAEELLRSPPQRGFVPDEV 492
Query: 742 KYRTLFLKYHK 752
Y T+ Y K
Sbjct: 493 SYGTVMAAYFK 503
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 113/512 (22%), Positives = 191/512 (37%), Gaps = 49/512 (9%)
Query: 246 LIAMK--PNTNTFNIALAGCLLFETTRKAEQLLDIMPRIGVKADSNLLIIMAHIYERNGR 303
LIA++ PN TFN+ + T A L M G+ D + + R G
Sbjct: 201 LIALRLHPNHYTFNLLVHTHCSKGTLADALSTLSTMQGFGLSPDVVTYNTLLKAHCRKGM 260
Query: 304 REELRKL-QRHIDEAVNLSDIQFRQFYNCLLSCHLKFGDLNSASKMVLEMLQRAKEAR-- 360
E R L R E + + R YN L+S + + G + A+ +V M E
Sbjct: 261 LGEARTLLARMKKEGIAPT----RATYNTLVSAYARLGWIKQATNVVEAMTAFGFEPDLW 316
Query: 361 --NSLAAAMLPFNAVGVNNRTPSEQNVNCTNSVDLENSGIIENHILSYEDFTKDRKFVAL 418
N LAA + V + E +E+ I+ +++Y D F
Sbjct: 317 TYNVLAAGLCQAGKVDEAFKLKDE----------MEHLSIVSPDVVTYNTLV-DACFKYQ 365
Query: 419 EAEVKRVLQTLLGMLQKQVELITTEHGILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAE 478
+ L L M K V+ H I+ VK G+ +E L
Sbjct: 366 RSS--DALNLLEEMRDKGVKSSLVTHNIV----------VKGLCREGQLEEALGRLKMMT 413
Query: 479 KENLQVSHDDAALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANR 538
+E L + D +I + +A L+DEM +G++ + +LL + R
Sbjct: 414 EEGL--APDVITYNTLIDAYCKARNVAKAFVLMDEMVRSGLKMDTFTLNTLLYNLCKEKR 471
Query: 539 PREVTALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFE 598
E LLR G D Y ++ + + AL+L+ EM + K+ S + +
Sbjct: 472 YEEAEELLRSPPQRGFVPDEVSYGTVMAAYFKENKPEPALYLWDEMSKRKLTPSIYT-YN 530
Query: 599 MLVKG-CAQNHEAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMR 657
L+KG C + KL + +K+G D +N +IH +CK+ ++ A + +M
Sbjct: 531 TLIKGLCTIGKLTEAIDKLNELMKKGLVPDDTT--YNIIIHAYCKEGDLEKAFQFHNKML 588
Query: 658 SLGHLPNAQTFHSMVTGYAAIGG--KYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTF 715
P+ T ++++ G G K ++ E W E + N +++
Sbjct: 589 ENYFKPDVVTCNTLMNGLCLHGKLEKAIKLFESWAEKGKKVDVITYN-------TLIQAL 641
Query: 716 VRGGFFARANEVVAMMEEGKMFIDKYKYRTLF 747
+ G A A ME + D + Y +
Sbjct: 642 CKDGDVDTALHFFADMEARGLQPDAFTYNVVL 673
>gi|224081016|ref|XP_002306265.1| predicted protein [Populus trichocarpa]
gi|222855714|gb|EEE93261.1| predicted protein [Populus trichocarpa]
Length = 548
Score = 56.6 bits (135), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 50/230 (21%), Positives = 93/230 (40%), Gaps = 12/230 (5%)
Query: 494 VITLCISLGWLDQAH------DLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLR 547
V + I L +AH D L M G+ S Y S++K R + LL
Sbjct: 325 VTSFSIVLHVYSRAHKPELTLDKLKLMKEKGICPSVVTYTSVVKCLCSCGRIEDAEELLG 384
Query: 548 DARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQN 607
+ G+ A Y + + +KD AL L+K+M+E + G + +L++
Sbjct: 385 EMVRNGVSRTAVTYNCFFKEYMGRKDAESALKLYKKMREDGLGSLGLHSYNILLRMFMML 444
Query: 608 HEAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQT 667
+ ++ ++ +++K + + + +IH C+K ++A K M G LP T
Sbjct: 445 NRLDIVNEIWEDLKSSG-LGPDLDSYTMLIHGLCEKEKWREACKFFVEMIEKGLLPQKVT 503
Query: 668 FHSMVTGYAAIGGKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVR 717
F ++ G +++ W +K S+ F E + L + R
Sbjct: 504 FETLYKGLIQ-----SDMLRTWRRLKKKLDEESITFGSEFQNYQLKPYRR 548
>gi|359484268|ref|XP_002278014.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g06000-like [Vitis vinifera]
Length = 641
Score = 56.2 bits (134), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 46/195 (23%), Positives = 77/195 (39%), Gaps = 6/195 (3%)
Query: 485 SHDDAALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTA 544
S D + LG +++ G + A +D GV S VY LL + N+ E
Sbjct: 169 SPDASVLGFLVSSATDAGKFNIARTWVD-----GVEFSLVVYNKLLNQLVRGNQVDEAVC 223
Query: 545 LLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGC 604
R+ D+ + L++ A LF EM+ + L+ G
Sbjct: 224 FFREQMGLHGPFDSCSFNILIRGLCRIGKVDKAFELFNEMRGFGC-SPDVITYNTLINGF 282
Query: 605 AQNHEAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPN 664
+ +E LL+E+ + V + ++I +CK M+ A M S G PN
Sbjct: 283 CRVNEVDRGHDLLKELLSKNDLSPDVVTYTSIISGYCKLGKMEKASILFNNMISSGIKPN 342
Query: 665 AQTFHSMVTGYAAIG 679
A TF+ ++ G+ +G
Sbjct: 343 AFTFNILINGFGKVG 357
Score = 45.4 bits (106), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 69/330 (20%), Positives = 110/330 (33%), Gaps = 72/330 (21%)
Query: 453 IYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQAHDLLD 512
+Y KL+ + + E F E+ L D + +I +G +D+A +L +
Sbjct: 204 VYNKLLNQLVRGNQVDEAVCFF--REQMGLHGPFDSCSFNILIRGLCRIGKVDKAFELFN 261
Query: 513 EMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAG-IQLDASCYEALLQSKIVQ 571
EM G Y +L+ + N LL++ S + D Y +++
Sbjct: 262 EMRGFGCSPDVITYNTLINGFCRVNEVDRGHDLLKELLSKNDLSPDVVTYTSIISGYCKL 321
Query: 572 KDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRIDCGVH 631
A LF M S I + F +L+ G
Sbjct: 322 GKMEKASILFNNMISSGIKPNAFT-FNILING---------------------------- 352
Query: 632 DWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGE 691
F K M AE + M LG P+ TF S++ G+ GK +LW E
Sbjct: 353 --------FGKVGDMVSAENMYEEMLLLGCPPDIITFTSLIDGHCRT-GKVERSLKLWHE 403
Query: 692 MK---------SFASSTSMNFDEELL----------------------DSVLYTFVRGGF 720
+ +FA T+ E L + V+ F + G
Sbjct: 404 LNARNLSPNEYTFAILTNALCKENRLHEARGFLRDLKWRHIVAQPFMYNPVIDGFCKAGN 463
Query: 721 FARANEVVAMMEEGKMFIDKYKYRTLFLKY 750
AN ++A MEE + DK Y L + +
Sbjct: 464 VDEANVILAEMEEKRCKPDKITYTILIIGH 493
>gi|326532582|dbj|BAK05220.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 697
Score = 56.2 bits (134), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 72/329 (21%), Positives = 128/329 (38%), Gaps = 41/329 (12%)
Query: 453 IYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQAHDLLD 512
+ L+K F + G KE + ++E E + + + ++ + +++A L
Sbjct: 345 VSASLIKIFCDEGMKKEA--LIFQSEMEKRGIPSNTSIYNTIMNVYCKCSQIEEAEGLFA 402
Query: 513 EMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQK 572
EM G++ + Y L+ AY +P V +LL + G Q +A Y L+ + QK
Sbjct: 403 EMKEKGLKPTKVTYNILMDAYSRRLQPEVVESLLLEMHDLGFQPNARSYNCLISAYGRQK 462
Query: 573 D-TPGALHLFKEMKESKIPR--------------SGHQE------FEMLVKGCAQNHE-- 609
+ A F MK+ I SG E +M +G + E
Sbjct: 463 KMSEKAEDAFLRMKKGGIKATSSSYTSLICAYAVSGQYEKAHIAYLDMKREGLKPSLETY 522
Query: 610 ---------AGLMAKLLQEVKE--GQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRS 658
AG KL++ K +++ C ++ V+ K L A +
Sbjct: 523 TALLDIFRRAGNTEKLMETWKSMTDEKVGCTRVTFHMVLDGLAKHGLFVQARDVICEFGK 582
Query: 659 LGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRG 718
+G P A T++ ++ YA GG++ ++ +L EM S+ + D +++Y + R
Sbjct: 583 IGLPPTAMTYNILMNAYAK-GGQHYKLPQLLKEM----STLELKPDSVTYSTLIYAYARV 637
Query: 719 GFFARANEVVAMMEEGKMFIDKYKYRTLF 747
F+RA M D YR L
Sbjct: 638 RDFSRAFYYHKQMVRNGQVPDAKSYRKLL 666
Score = 49.3 bits (116), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 57/264 (21%), Positives = 108/264 (40%), Gaps = 15/264 (5%)
Query: 478 EKENLQVSHDDAALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEAN 537
EK N+Q H +++ ++ + + M+ GV+ S V ASL+K + +
Sbjct: 299 EKNNVQPDHVTSSI-MLLVMKRRKASAKDSWKFFQRMNRKGVKWSLGVSASLIKIFCDEG 357
Query: 538 RPREVTALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEF 597
+E + GI + S Y ++ A LF EMKE + + +
Sbjct: 358 MKKEALIFQSEMEKRGIPSNTSIYNTIMNVYCKCSQIEEAEGLFAEMKEKGL-KPTKVTY 416
Query: 598 EMLVKGCAQNHEAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCK-KRLMQDAEKALKRM 656
+L+ ++ + ++ LL E+ + +N +I + + K++ + AE A RM
Sbjct: 417 NILMDAYSRRLQPEVVESLLLEMHD-LGFQPNARSYNCLISAYGRQKKMSEKAEDAFLRM 475
Query: 657 RSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFV 716
+ G + ++ S++ Y A+ G+Y + + +MK S+ LLD
Sbjct: 476 KKGGIKATSSSYTSLICAY-AVSGQYEKAHIAYLDMKREGLKPSLETYTALLD------- 527
Query: 717 RGGFFARANEVVAMMEEGKMFIDK 740
F RA +ME K D+
Sbjct: 528 ---IFRRAGNTEKLMETWKSMTDE 548
Score = 40.4 bits (93), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 66/345 (19%), Positives = 125/345 (36%), Gaps = 70/345 (20%)
Query: 252 NTNTFNIALAGCLLFETTRKAEQLLDIMPRIGVKADSNLLIIMAHIYERNGRREELRKLQ 311
NT+ +N + +AE L M G+K I+ Y R +LQ
Sbjct: 377 NTSIYNTIMNVYCKCSQIEEAEGLFAEMKEKGLKPTKVTYNILMDAYSR--------RLQ 428
Query: 312 RHIDEAV--NLSDIQFR---QFYNCLLSCHLKFGDLNSASKMVLEMLQRAKEARNSLAAA 366
+ E++ + D+ F+ + YNCL+S + R K+ A
Sbjct: 429 PEVVESLLLEMHDLGFQPNARSYNCLISAY-----------------GRQKKMSEKAEDA 471
Query: 367 MLPFNAVGVNNRTPSEQNVNCTNSVDLENSGIIENHILSYEDFTKDRKFVALEAEVKRVL 426
L G+ + S ++ C +V SG E ++Y D ++
Sbjct: 472 FLRMKKGGIKATSSSYTSLICAYAV----SGQYEKAHIAYLDMKREG------------- 514
Query: 427 QTLLGMLQKQVELITTEHGILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSH 486
L+P+ + Y L+ F AG T++L E + +
Sbjct: 515 --------------------LKPSLETYTALLDIFRRAGNTEKLMETWKSMTDEKVGCTR 554
Query: 487 DDAALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALL 546
V+ G QA D++ E G+ ++ Y L+ AY + + ++ LL
Sbjct: 555 --VTFHMVLDGLAKHGLFVQARDVICEFGKIGLPPTAMTYNILMNAYAKGGQHYKLPQLL 612
Query: 547 RDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEM-KESKIP 590
++ + ++ D+ Y L+ + +D A + K+M + ++P
Sbjct: 613 KEMSTLELKPDSVTYSTLIYAYARVRDFSRAFYYHKQMVRNGQVP 657
>gi|449433161|ref|XP_004134366.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
mitochondrial-like [Cucumis sativus]
Length = 917
Score = 56.2 bits (134), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 100/441 (22%), Positives = 181/441 (41%), Gaps = 44/441 (9%)
Query: 250 KPNTNTFNIALAGCLLFETTRKAEQLLDIMPRIGVKADSNLLIIMAHIYERNGRREELRK 309
+P+ ++NI + L + A LL++M G K + + + G E RK
Sbjct: 320 EPDVYSYNIVINANCLKGQSSYALHLLNLMIENGCKPSIATFCTIIDAFCKEGNVELARK 379
Query: 310 LQRHIDEAVNLSDIQFRQFYNCLLSCHLKFGDLNSASKMVLEMLQRAKEARNSLAAAMLP 369
+ DE ++ Q YN ++S ++K D++ A+ + EM R K+ + +
Sbjct: 380 ---YFDEIEDMGLSQNTIVYNIMISGYVKARDISQANLLFEEM--RTKD----IVPDGIT 430
Query: 370 FNA-VGVNNRTPSEQNVNCTNSVDLENSGIIENHILSYEDFT-KDRKFVALEAEVKRVLQ 427
FN V + R E++ N DL SG++ H S D T + E ++L+
Sbjct: 431 FNTLVAGHYRYGKEEDGNRLLR-DLSVSGLL--HDSSLCDVTVAGLCWAGRYDEAMKLLE 487
Query: 428 TLLGMLQKQVELITTEHGILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHD 487
LLG GI P+ + ++ A+ AG + + K L S
Sbjct: 488 NLLG------------KGI-PPSVVAFNSIIAAYGNAGLEERAFYAYGIMVKFGLTPSSS 534
Query: 488 DAALGHVITLCISL---GWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTA 544
+ +L ISL G LD+A L +M G ++ + LL Y +
Sbjct: 535 TCS-----SLLISLVRKGSLDEAWIALYDMIDKGFPVTNMAFTVLLDGYFRIGAVNMAES 589
Query: 545 LLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEM-KESKIPRSGHQEFEMLVKG 603
L + + G+ DA + A + + A +F +M ++ +P + + L+ G
Sbjct: 590 LWNEMKGRGVFPDAVAFAAFINGLCISGLMTDAYDVFSDMLRKGFVPN--NFVYNSLIGG 647
Query: 604 CAQNHEAGLMAKLLQEV-KEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHL 662
+ + KL++E+ K G D + N +I CK+ M+ A + M +G
Sbjct: 648 FCKVGKLNEALKLVREMNKRGLLPD--IFTVNMIICGLCKQGRMKLAIETFMDMCRMGLS 705
Query: 663 PNAQTFHSMVTGYAA---IGG 680
P+ T+++++ GY +GG
Sbjct: 706 PDIVTYNTLIDGYCKAFDVGG 726
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/203 (22%), Positives = 86/203 (42%), Gaps = 6/203 (2%)
Query: 478 EKENLQVSHDDAALGHVIT-LCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEA 536
E + V D A I LCIS G + A+D+ +M G ++ VY SL+ + +
Sbjct: 593 EMKGRGVFPDAVAFAAFINGLCIS-GLMTDAYDVFSDMLRKGFVPNNFVYNSLIGGFCKV 651
Query: 537 NRPREVTALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQE 596
+ E L+R+ G+ D ++ Q A+ F +M +
Sbjct: 652 GKLNEALKLVREMNKRGLLPDIFTVNMIICGLCKQGRMKLAIETFMDMCRMGL-SPDIVT 710
Query: 597 FEMLVKGCAQNHEAGLMAKLLQEVKE-GQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKR 655
+ L+ G + + G L+ ++ + G D + +N IH +C R + A L+
Sbjct: 711 YNTLIDGYCKAFDVGGADDLMMKMSDSGWEPD--LTTYNIRIHGYCTVRKINRAVMILEE 768
Query: 656 MRSLGHLPNAQTFHSMVTGYAAI 678
+ S+G +PN T+++M+ +
Sbjct: 769 LISVGIVPNTVTYNTMINAVCNV 791
>gi|449432854|ref|XP_004134213.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g06920-like [Cucumis sativus]
Length = 904
Score = 56.2 bits (134), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 103/236 (43%), Gaps = 18/236 (7%)
Query: 502 GWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCY 561
G +D+A+ L ++M A ++ VY SL++ + + R + + + G D
Sbjct: 493 GRVDEAYKLYEQMLDANQIPNAVVYTSLIRNFFKCGRKEDGHKIYNEMLRLGCSPDLLLL 552
Query: 562 EALLQSKIVQKDTPGALHLFKEMKE-SKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEV 620
+ + LF+E+K IP + + + +L+ G + A +L +
Sbjct: 553 NTYMDCVFKAGEIEKGRALFQEIKNLGFIPDA--RSYTILIHGLVKAGFAHEAYELFYTM 610
Query: 621 KE-GQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIG 679
KE G +D +N VI FCK + A + L+ M++ GH P T+ S++ G A I
Sbjct: 611 KEQGCVLD--TRAYNTVIDGFCKSGKVNKAYQLLEEMKTKGHEPTVVTYGSVIDGLAKI- 667
Query: 680 GKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGF--FARANEVVAMMEE 733
+ E L+ E KS L+ V+Y+ + GF R +E +MEE
Sbjct: 668 DRLDEAYMLFEEAKSKGIE---------LNVVIYSSLIDGFGKVGRIDEAYLIMEE 714
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 64/294 (21%), Positives = 123/294 (41%), Gaps = 24/294 (8%)
Query: 449 PTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQAH 508
P + Y L+ ++AG E +++ + D A VI G +++A+
Sbjct: 582 PDARSYTILIHGLVKAGFAHEAYELFYTMKEQGCVL--DTRAYNTVIDGFCKSGKVNKAY 639
Query: 509 DLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQS- 567
LL+EM G + Y S++ + +R E L +A+S GI+L+ Y +L+
Sbjct: 640 QLLEEMKTKGHEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKGIELNVVIYSSLIDGF 699
Query: 568 -KIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRI 626
K+ + D A + +E+ + + + + + L+ + E Q +K+ +
Sbjct: 700 GKVGRIDE--AYLIMEELMQKGLTPNVYT-WNCLLDALVKAEEISEALVCFQSMKD---L 753
Query: 627 DCGVH--DWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTE 684
C + ++ +IH CK R A + M+ G PN T+ +M++G A G E
Sbjct: 754 KCTPNYITYSILIHGLCKIRKFNKAFVFWQEMQKQGFKPNVFTYTTMISGLAK-AGNIVE 812
Query: 685 VTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGF--FARANEVVAMMEEGKM 736
L+ + K + DS +Y + G RA++ + EE ++
Sbjct: 813 ADTLFEKFKEKGG---------VADSAIYNAIIEGLSNANRASDAYRLFEEARL 857
Score = 47.0 bits (110), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 83/183 (45%), Gaps = 3/183 (1%)
Query: 510 LLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKI 569
+L+EM +AG S++ ++ ++I++ + RE ++ R + S Y L+ +
Sbjct: 152 ILEEMSIAGFGPSNNTCIEIVLSFIKSRKLREAFTFIQTMRKLKFRPAFSAYTNLIGALS 211
Query: 570 VQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRIDCG 629
+D+ L LF++M+E + H F L++ A+ LL E+K ++
Sbjct: 212 TSRDSDCMLTLFQQMQELGYAVNVHL-FTTLIRVFAREGRVDAALSLLDEMKSNS-LEPD 269
Query: 630 VHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELW 689
V +N I F K + A K M++ G + + T+ SM+ G + E EL+
Sbjct: 270 VVLYNVCIDCFGKAGKVDMAWKFFHEMKANGLVLDDVTYTSMI-GVLCKADRLNEAVELF 328
Query: 690 GEM 692
M
Sbjct: 329 EHM 331
Score = 46.6 bits (109), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 73/394 (18%), Positives = 139/394 (35%), Gaps = 70/394 (17%)
Query: 447 LQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQ 506
L+P +Y + F +AGK F + + L + DD +I + L++
Sbjct: 266 LEPDVVLYNVCIDCFGKAGKVDMAWKFFHEMKANGLVL--DDVTYTSMIGVLCKADRLNE 323
Query: 507 AHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQ 566
A +L + M + Y +++ Y A + + +LL R G Y +L
Sbjct: 324 AVELFEHMDQNKQVPCAYAYNTMIMGYGMAGKFEDAYSLLERQRRKGCIPSVVSYNCILS 383
Query: 567 SKIVQKDTPGALHLFKEMKESKIP-------------RSGHQEFEMLVKGCAQNHEAGLM 613
+ AL F+EMK+ IP ++G E ++V+ + +AGL
Sbjct: 384 CLGRKGQVDEALKKFEEMKKDAIPNLSTYNIMIDMLCKAGKLETALVVRDAMK--DAGLF 441
Query: 614 AK------LLQEVKEGQRIDCGVHDWNNVIHFFCKKRL---------------MQDAEKA 652
++ + + QR+D + + H C+ + +A K
Sbjct: 442 PNVITVNIMVDRLCKAQRLDDACSIFEGLDHKTCRPDAVTYCSLIEGLGRHGRVDEAYKL 501
Query: 653 LKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEMKSFASSTSMNFDEELLDSV- 711
++M +PNA + S++ + G K + +++ EM S + +D V
Sbjct: 502 YEQMLDANQIPNAVVYTSLIRNFFKCGRK-EDGHKIYNEMLRLGCSPDLLLLNTYMDCVF 560
Query: 712 ------------------------------LYTFVRGGFFARANEVVAMMEEGKMFIDKY 741
++ V+ GF A E+ M+E +D
Sbjct: 561 KAGEIEKGRALFQEIKNLGFIPDARSYTILIHGLVKAGFAHEAYELFYTMKEQGCVLDTR 620
Query: 742 KYRTLFLKYHKTLYKGKTPKFQTEAQLKKREAAL 775
Y T+ + K+ K + E + K E +
Sbjct: 621 AYNTVIDGFCKSGKVNKAYQLLEEMKTKGHEPTV 654
>gi|410110063|gb|AFV61111.1| pentatricopeptide repeat-containing protein 123, partial [Aloysia
barbata]
Length = 364
Score = 56.2 bits (134), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 52/255 (20%), Positives = 117/255 (45%), Gaps = 25/255 (9%)
Query: 447 LQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQ---VSHDDAALGHVITLCISLGW 503
++P Y L++ + +A E H +++N++ V+++ + + TL
Sbjct: 123 IEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTL-----E 177
Query: 504 LDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEA 563
++A++L+ EM G+ +S Y++++ + + + L + RS+G+++D +
Sbjct: 178 HEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEID----QI 233
Query: 564 LLQSKIVQKDTPG----ALHLFKEMKE-SKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQ 618
L Q+ IV + G A L E+K IPR ++ G + EA + + Q
Sbjct: 234 LFQTMIVAYERAGLVAHAKRLLHELKRPDNIPRDTAIH---ILAGAGRIEEATYVFR--Q 288
Query: 619 EVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAI 678
+ G+ D V + +IH K + + + +MR LG+ P++ ++ Y +
Sbjct: 289 AIDAGEVKDITV--FERMIHLLSKYKKYSNVXEVFDKMRGLGYFPDSNVIAVVLNAYGKL 346
Query: 679 GGKYTEVTELWGEMK 693
++ + +++ EM+
Sbjct: 347 -XEFDKANDVYMEMQ 360
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 52/232 (22%), Positives = 107/232 (46%), Gaps = 25/232 (10%)
Query: 506 QAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALL 565
+A L+ EM AGV +++ Y++LL Y+E + E ++ + R LD + ++
Sbjct: 40 EARSLISEMKXAGVMPNTTSYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMI 99
Query: 566 QSKIVQKDTPGALHLFKE-------MKESKI-PRSGHQEFEMLVKGCAQNH-EAGLMAKL 616
D G L + KE M++ I P + V G A+ EA + +L
Sbjct: 100 -------DVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRL 152
Query: 617 LQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYA 676
+Q + I+ V +N+++ + K + A ++ M+S G PN+ T+ ++++ +
Sbjct: 153 MQR----KNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWG 208
Query: 677 AIGGKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVV 728
+ GK L+ +++ S+ + D+ L +++ + R G A A ++
Sbjct: 209 KV-GKLDRAAMLFQKLR----SSGVEIDQILFQTMIVAYERAGLVAHAKRLL 255
>gi|449513353|ref|XP_004164304.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g06920-like [Cucumis sativus]
Length = 904
Score = 56.2 bits (134), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 103/236 (43%), Gaps = 18/236 (7%)
Query: 502 GWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCY 561
G +D+A+ L ++M A ++ VY SL++ + + R + + + G D
Sbjct: 493 GRVDEAYKLYEQMLDANQIPNAVVYTSLIRNFFKCGRKEDGHKIYNEMLRLGCSPDLLLL 552
Query: 562 EALLQSKIVQKDTPGALHLFKEMKE-SKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEV 620
+ + LF+E+K IP + + + +L+ G + A +L +
Sbjct: 553 NTYMDCVFKAGEIEKGRALFQEIKNLGFIPDA--RSYTILIHGLVKAGFAHEAYELFYTM 610
Query: 621 KE-GQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIG 679
KE G +D +N VI FCK + A + L+ M++ GH P T+ S++ G A I
Sbjct: 611 KEQGCVLD--TRAYNTVIDGFCKSGKVNKAYQLLEEMKTKGHEPTVVTYGSVIDGLAKI- 667
Query: 680 GKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGF--FARANEVVAMMEE 733
+ E L+ E KS L+ V+Y+ + GF R +E +MEE
Sbjct: 668 DRLDEAYMLFEEAKSKGIE---------LNVVIYSSLIDGFGKVGRIDEAYLIMEE 714
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 64/294 (21%), Positives = 123/294 (41%), Gaps = 24/294 (8%)
Query: 449 PTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQAH 508
P + Y L+ ++AG E +++ + D A VI G +++A+
Sbjct: 582 PDARSYTILIHGLVKAGFAHEAYELFYTMKEQGCVL--DTRAYNTVIDGFCKSGKVNKAY 639
Query: 509 DLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQS- 567
LL+EM G + Y S++ + +R E L +A+S GI+L+ Y +L+
Sbjct: 640 QLLEEMKTKGHEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKGIELNVVIYSSLIDGF 699
Query: 568 -KIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRI 626
K+ + D A + +E+ + + + + + L+ + E Q +K+ +
Sbjct: 700 GKVGRIDE--AYLIMEELMQKGLTPNVYT-WNCLLDALVKAEEISEALVCFQSMKD---L 753
Query: 627 DCGVH--DWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTE 684
C + ++ +IH CK R A + M+ G PN T+ +M++G A G E
Sbjct: 754 KCTPNYITYSILIHGLCKIRKFNKAFVFWQEMQKQGFKPNVFTYTTMISGLAK-AGNIVE 812
Query: 685 VTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGF--FARANEVVAMMEEGKM 736
L+ + K + DS +Y + G RA++ + EE ++
Sbjct: 813 ADTLFEKFKEKGG---------VADSAIYNAIIEGLSNANRASDAYRLFEEARL 857
Score = 47.4 bits (111), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 83/183 (45%), Gaps = 3/183 (1%)
Query: 510 LLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKI 569
+L+EM +AG S++ ++ ++I++ + RE ++ R + S Y L+ +
Sbjct: 152 ILEEMSIAGFGPSNNTCIEIVLSFIKSRKLREAFTFIQTMRKLKFRPAFSAYTNLIGALS 211
Query: 570 VQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRIDCG 629
+D+ L LF++M+E + H F L++ A+ LL E+K ++
Sbjct: 212 TSRDSDCMLTLFQQMQELGYAVNVHL-FTTLIRVFAREGRVDAALSLLDEMKSNS-LEPD 269
Query: 630 VHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELW 689
V +N I F K + A K M++ G + + T+ SM+ G + E EL+
Sbjct: 270 VVLYNVCIDCFGKAGKVDMAWKXFHEMKANGLVLDDVTYTSMI-GVLCKADRLNEAVELF 328
Query: 690 GEM 692
M
Sbjct: 329 EHM 331
Score = 43.1 bits (100), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 72/394 (18%), Positives = 138/394 (35%), Gaps = 70/394 (17%)
Query: 447 LQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQ 506
L+P +Y + F +AGK + + L + DD +I + L++
Sbjct: 266 LEPDVVLYNVCIDCFGKAGKVDMAWKXFHEMKANGLVL--DDVTYTSMIGVLCKADRLNE 323
Query: 507 AHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQ 566
A +L + M + Y +++ Y A + + +LL R G Y +L
Sbjct: 324 AVELFEHMDQNKQVPCAYAYNTMIMGYGMAGKFEDAYSLLERQRRKGCIPSVVSYNCILS 383
Query: 567 SKIVQKDTPGALHLFKEMKESKIP-------------RSGHQEFEMLVKGCAQNHEAGLM 613
+ AL F+EMK+ IP ++G E ++V+ + +AGL
Sbjct: 384 CLGRKGQVDEALKKFEEMKKDAIPNLSTYNIMIDMLCKAGKLETALVVRDAMK--DAGLF 441
Query: 614 AK------LLQEVKEGQRIDCGVHDWNNVIHFFCKKRL---------------MQDAEKA 652
++ + + QR+D + + H C+ + +A K
Sbjct: 442 PNVITVNIMVDRLCKAQRLDDACSIFEGLDHKTCRPDAVTYCSLIEGLGRHGRVDEAYKL 501
Query: 653 LKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEMKSFASSTSMNFDEELLDSV- 711
++M +PNA + S++ + G K + +++ EM S + +D V
Sbjct: 502 YEQMLDANQIPNAVVYTSLIRNFFKCGRK-EDGHKIYNEMLRLGCSPDLLLLNTYMDCVF 560
Query: 712 ------------------------------LYTFVRGGFFARANEVVAMMEEGKMFIDKY 741
++ V+ GF A E+ M+E +D
Sbjct: 561 KAGEIEKGRALFQEIKNLGFIPDARSYTILIHGLVKAGFAHEAYELFYTMKEQGCVLDTR 620
Query: 742 KYRTLFLKYHKTLYKGKTPKFQTEAQLKKREAAL 775
Y T+ + K+ K + E + K E +
Sbjct: 621 AYNTVIDGFCKSGKVNKAYQLLEEMKTKGHEPTV 654
>gi|449444190|ref|XP_004139858.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
gi|449530677|ref|XP_004172320.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
Length = 839
Score = 56.2 bits (134), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 51/233 (21%), Positives = 95/233 (40%), Gaps = 8/233 (3%)
Query: 449 PTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQAH 508
P + Y ++K F G ++ T + K S + +I + G+++ A
Sbjct: 410 PNTETYNVIIKGFCSIGYIQKATAIFDQMLKAG--PSPNVITYNIIIHIYFKQGYMNNAM 467
Query: 509 DLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSK 568
LL+ M G++ + YA+L+ + + +L + GI + Y A++
Sbjct: 468 RLLEMMKGNGLKLDTWTYANLISGFSRGGKLEHAFSLFNEMVEHGISPNVVTYNAIINGY 527
Query: 569 IVQKDTPGALHLFKEMKES-KIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQE-VKEGQRI 626
+ AL LF +M ES +P SG + M++ G ++ + + VK+G
Sbjct: 528 LTVAKVDDALALFWKMVESGNVPSSG--TYNMMISGFSKTNRISEAENFCGKMVKQGLLP 585
Query: 627 DCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIG 679
+ V + + I CK A K M+ + PN T+ S++ G G
Sbjct: 586 N--VITYTSFIDGLCKNGRTSLAFKIFHEMKKRDYFPNLCTYSSLIDGLCQEG 636
Score = 49.3 bits (116), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 53/237 (22%), Positives = 98/237 (41%), Gaps = 15/237 (6%)
Query: 449 PTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHD-DAALGHVITLCISLGWLDQ- 506
P + + I ++K+ G+ K + L + ++D L TL I LG D
Sbjct: 129 PADNVRILMIKSCRNEGEVKRVIQVL-----SEINTTYDFGYTLYSFSTLLIQLGKFDMD 183
Query: 507 --AHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEAL 564
D+ EM +G+R + + +++K + +E ++ G D Y +L
Sbjct: 184 GLGRDVYIEMLNSGIRPNLFTFNAMIKILCNKGKVQEAELIMGHIFHYGACPDTFTYTSL 243
Query: 565 LQSKIVQKDTPGALHLFKEM-KESKIPRSGHQEFEMLVKG-CAQNHEAGLMAKLLQEVKE 622
+ + A +F M K+ P S + L+ G C++ M L + + +
Sbjct: 244 IIGHCKNGNLDLAFEMFDRMVKDGCDPNS--VTYSALINGLCSEGRLEEAMDMLEEMIDK 301
Query: 623 GQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIG 679
G I+ VH + I C +A K L +M+ G PN QT+ ++++G + G
Sbjct: 302 G--IEPTVHAYTIPIVSLCDAGRSCEAVKLLGKMKKRGCGPNVQTYTALISGLSRDG 356
Score = 47.0 bits (110), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 47/252 (18%), Positives = 106/252 (42%), Gaps = 9/252 (3%)
Query: 502 GWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCY 561
G LD A ++ D M G +S Y++L+ R E +L + GI+ Y
Sbjct: 251 GNLDLAFEMFDRMVKDGCDPNSVTYSALINGLCSEGRLEEAMDMLEEMIDKGIEPTVHAY 310
Query: 562 EALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVK 621
+ S + A+ L +MK+ Q + L+ G +++ + + + ++
Sbjct: 311 TIPIVSLCDAGRSCEAVKLLGKMKKRGC-GPNVQTYTALISGLSRDGKFEVAIGVYHKML 369
Query: 622 EGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGK 681
+ V + + + R + A + M S LPN +T++ ++ G+ +I G
Sbjct: 370 ADGLVPTAVTYSALINQLYVEGRF-ETALTIFEWMLSHDSLPNTETYNVIIKGFCSI-GY 427
Query: 682 YTEVTELWGEM-KSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFIDK 740
+ T ++ +M K+ S + + + +++ + + G+ A ++ MM+ + +D
Sbjct: 428 IQKATAIFDQMLKAGPSPNVITY-----NIIIHIYFKQGYMNNAMRLLEMMKGNGLKLDT 482
Query: 741 YKYRTLFLKYHK 752
+ Y L + +
Sbjct: 483 WTYANLISGFSR 494
>gi|357487731|ref|XP_003614153.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355515488|gb|AES97111.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 691
Score = 56.2 bits (134), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 66/324 (20%), Positives = 126/324 (38%), Gaps = 41/324 (12%)
Query: 457 LVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQAHDLLDEMHL 516
L+K+F G E +I++E E +S + ++ +++A L EM
Sbjct: 325 LIKSFCVEGLLSE--ALIIQSEMEKKGISSNAIVYNTLMDAYCKSNRVEEAEGLFVEMKA 382
Query: 517 AGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQKD-TP 575
G++ ++ + L+ AY +P+ V +LL + + G++ +A+ Y L+ + QK +
Sbjct: 383 KGIKPTAVTFNILMYAYSRRMQPKIVESLLAEMKDFGLKPNANSYTCLISAYGRQKKMSD 442
Query: 576 GALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEG------------ 623
A F +MK+ I + H M+ A ++EG
Sbjct: 443 MAADAFLKMKKVGIKPTSHSYTAMIHAYSVSGWHEKAYAVFENMIREGIKPSIETYTTLL 502
Query: 624 ---------------------QRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHL 662
+++ +N ++ F K+ L +A + +G
Sbjct: 503 DAFRRVGDTETLMKIWKLMMSEKVKGTQVTFNILVDGFAKQGLFMEARDVISEFGKIGLQ 562
Query: 663 PNAQTFHSMVTGYAAIGGKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFA 722
P T++ ++ YA GG + + +L EM++ + D +V+Y FVR F
Sbjct: 563 PTVMTYNMLINAYAR-GGLDSNIPQLLKEMEAL----RLRPDSITYSTVIYAFVRVRDFK 617
Query: 723 RANEVVAMMEEGKMFIDKYKYRTL 746
RA M + +D YR L
Sbjct: 618 RAFFYHKEMVKSGYVMDISSYRKL 641
Score = 56.2 bits (134), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 63/258 (24%), Positives = 115/258 (44%), Gaps = 30/258 (11%)
Query: 490 ALGHVI-TLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRD 548
A G +I + C+ G L +A + EM G+ +++ VY +L+ AY ++NR E L +
Sbjct: 321 AFGALIKSFCVE-GLLSEALIIQSEMEKKGISSNAIVYNTLMDAYCKSNRVEEAEGLFVE 379
Query: 549 ARSAGIQLDASCYEAL-------LQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLV 601
++ GI+ A + L +Q KIV+ L EMK+ + + + L+
Sbjct: 380 MKAKGIKPTAVTFNILMYAYSRRMQPKIVES-------LLAEMKDFGL-KPNANSYTCLI 431
Query: 602 KGCAQNHEAGLMA--KLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSL 659
+ + MA L+ K G I H + +IH + + A + M
Sbjct: 432 SAYGRQKKMSDMAADAFLKMKKVG--IKPTSHSYTAMIHAYSVSGWHEKAYAVFENMIRE 489
Query: 660 GHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEMKS-FASSTSMNFDEELLDSVLYTFVRG 718
G P+ +T+ +++ + +G T + ++W M S T + F+ L+D F +
Sbjct: 490 GIKPSIETYTTLLDAFRRVGDTET-LMKIWKLMMSEKVKGTQVTFN-ILVDG----FAKQ 543
Query: 719 GFFARANEVVAMMEEGKM 736
G F A +V++ E GK+
Sbjct: 544 GLFMEARDVIS--EFGKI 559
Score = 46.6 bits (109), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 37/174 (21%), Positives = 77/174 (44%), Gaps = 3/174 (1%)
Query: 507 AHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQ 566
A ++M+ GVR + +L+K++ E + + GI +A Y L+
Sbjct: 303 AWQFFEKMNQKGVRWGKEAFGALIKSFCVEGLLSEALIIQSEMEKKGISSNAIVYNTLMD 362
Query: 567 SKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRI 626
+ A LF EMK I + F +L+ ++ + ++ LL E+K+ +
Sbjct: 363 AYCKSNRVEEAEGLFVEMKAKGI-KPTAVTFNILMYAYSRRMQPKIVESLLAEMKDFG-L 420
Query: 627 DCGVHDWNNVIHFFCKKRLMQD-AEKALKRMRSLGHLPNAQTFHSMVTGYAAIG 679
+ + +I + +++ M D A A +M+ +G P + ++ +M+ Y+ G
Sbjct: 421 KPNANSYTCLISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTAMIHAYSVSG 474
>gi|299469706|emb|CBN76560.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 915
Score = 56.2 bits (134), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 86/364 (23%), Positives = 144/364 (39%), Gaps = 37/364 (10%)
Query: 251 PNTNTFNIALAGCLLFETTRKAEQLLDIMPRIGVKADSNLLIIMAHIYERNGRREELRKL 310
PN+ + A+ C R A +LL M GV + +L + +E KL
Sbjct: 360 PNSQCYASAITACARAHDPRSAMRLLADMREDGVPPNDVVLNAAVDACGKGDAPDEALKL 419
Query: 311 QRHIDEAVNLSDIQFRQFYNCLLSCHLKFGDLNSASKMVLEMLQRAKEARN-SLAAAMLP 369
R +++A + +N +S + G A ++ EM +R + N S AAM
Sbjct: 420 LRGMEKAYGVKPNTV--TFNSAISGLSRAGRAREAKALLNEMSERGLKPDNFSFNAAMQG 477
Query: 370 FNAVGVNNRTPSEQNVNCTNSVDLENSGIIENHILSYEDFTKDRKFVALEAEVKRVLQTL 429
F A G T S + ++++ GI + ++SY A +VK L+ L
Sbjct: 478 FAAAGDPRNTASLSD-------EMKSRGIGMD-VVSYGTAVS---ACAKAGDVKGALKLL 526
Query: 430 LGMLQKQVELITTEHGIL------QPTEKIYIKLVKAFLEAGKTKELTHFL--IKAEKEN 481
M + VE T + K+ KL++ E G ++ T + I A N
Sbjct: 527 KEMQEAGVEPNTVVYNSALDACGRAGKPKVAEKLLRKMGETGVVRDATSYTGAIVACSRN 586
Query: 482 ---------LQVSHDDAALGHVIT------LCISLGWLDQAHDLLDEMHLAGVRASSSVY 526
L+ + IT C G QA LL+EM GV + Y
Sbjct: 587 GDGDKALEWLETMSKEGIAPEAITYNYAMAACGRSGNDRQAEWLLNEMRGQGVTPNRISY 646
Query: 527 ASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKE 586
++ + A +A R +V +LL + G++ D Y + + + +D A+ LF+EM+
Sbjct: 647 SAAMFALGKAGRLPDVLSLLEEMHREGVEADEVTYHIAVDAASIARDLGCAMDLFREMRA 706
Query: 587 SKIP 590
+P
Sbjct: 707 RGLP 710
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 93/232 (40%), Gaps = 7/232 (3%)
Query: 442 TEHGILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISL 501
+E G L+P + ++ F AG + + E ++ + D + G ++ C
Sbjct: 460 SERG-LKPDNFSFNAAMQGFAAAGDPRNTAS--LSDEMKSRGIGMDVVSYGTAVSACAKA 516
Query: 502 GWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCY 561
G + A LL EM AGV ++ VY S L A A +P+ LLR G+ DA+ Y
Sbjct: 517 GDVKGALKLLKEMQEAGVEPNTVVYNSALDACGRAGKPKVAEKLLRKMGETGVVRDATSY 576
Query: 562 EALLQSKIVQKDTPGALHLFKEM-KESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEV 620
+ + D AL + M KE P + + M G + N LL E+
Sbjct: 577 TGAIVACSRNGDGDKALEWLETMSKEGIAPEAITYNYAMAACGRSGNDRQAEW--LLNEM 634
Query: 621 KEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMV 672
+ GQ + ++ + K + D L+ M G + T+H V
Sbjct: 635 R-GQGVTPNRISYSAAMFALGKAGRLPDVLSLLEEMHREGVEADEVTYHIAV 685
Score = 47.0 bits (110), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 40/171 (23%), Positives = 75/171 (43%), Gaps = 8/171 (4%)
Query: 502 GWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCY 561
G +A LL+EM G++ + + + ++ + A PR +L + +S GI +D Y
Sbjct: 447 GRAREAKALLNEMSERGLKPDNFSFNAAMQGFAAAGDPRNTASLSDEMKSRGIGMDVVSY 506
Query: 562 EALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVK 621
+ + D GAL L KEM+E+ + + + C + + + KLL+++
Sbjct: 507 GTAVSACAKAGDVKGALKLLKEMQEAGV-EPNTVVYNSALDACGRAGKPKVAEKLLRKMG 565
Query: 622 EGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSL---GHLPNAQTFH 669
E V D + D +KAL+ + ++ G P A T++
Sbjct: 566 ETGV----VRDATSYTGAIVACSRNGDGDKALEWLETMSKEGIAPEAITYN 612
Score = 42.7 bits (99), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 33/150 (22%), Positives = 65/150 (43%), Gaps = 2/150 (1%)
Query: 545 LLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGC 604
L+++ R G ++ CY + + + D A+ L +M+E +P + V C
Sbjct: 349 LIQEMRREGPSPNSQCYASAITACARAHDPRSAMRLLADMREDGVPPN-DVVLNAAVDAC 407
Query: 605 AQNHEAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPN 664
+ KLL+ +++ + +N+ I + ++A+ L M G P+
Sbjct: 408 GKGDAPDEALKLLRGMEKAYGVKPNTVTFNSAISGLSRAGRAREAKALLNEMSERGLKPD 467
Query: 665 AQTFHSMVTGYAAIGGKYTEVTELWGEMKS 694
+F++ + G+AA G + L EMKS
Sbjct: 468 NFSFNAAMQGFAAAGDPRNTAS-LSDEMKS 496
>gi|297821008|ref|XP_002878387.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297324225|gb|EFH54646.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 766
Score = 56.2 bits (134), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 65/303 (21%), Positives = 118/303 (38%), Gaps = 63/303 (20%)
Query: 473 FLIKAEKENLQVSHDDAALGHVITL------CISLGWLDQAHDLLDEMHLAGVRASSSVY 526
F + EKE ++ G+V+T C SL +++A D+M AG + +Y
Sbjct: 463 FFMDMEKEGVK--------GNVVTYMTLIHACCSLSNIEKAMHWFDKMLEAGCSPDAKIY 514
Query: 527 ASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKE 586
+L+ + R + ++ R G LD Y L + LF
Sbjct: 515 YALISGLCQVRRDHDAIRVVEKLREGGFSLDLLAYNML-------------IGLF----- 556
Query: 587 SKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLM 646
C +N+ + L KEG + D +N +I FF K +
Sbjct: 557 -----------------CDKNNAEKVYEMLTDMEKEGMKPDSIT--YNTLISFFGKHKDF 597
Query: 647 QDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEMKSFASSTSMNFDEE 706
+ E+ +++MR P T+ +++ Y ++G E+ E K + +N +
Sbjct: 598 ESVERMMEQMREDELDPTVATYGAVIEAYCSVG----ELGEALKLFKDMGLRSKVNPNTV 653
Query: 707 LLDSVLYTFVRGGFFARANEVVAMMEEGKMFIDKYKYRTLFLKYHKTLYKGKTPKFQTEA 766
+ + ++ F + G F +A +++ EE KM + + T + L+K K Q E
Sbjct: 654 IYNILINAFSKLGNFGQA---LSLKEEMKMKMVRPNVET-----YNALFKCLKEKNQAET 705
Query: 767 QLK 769
LK
Sbjct: 706 LLK 708
>gi|356544498|ref|XP_003540687.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
mitochondrial-like [Glycine max]
Length = 623
Score = 56.2 bits (134), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 77/173 (44%), Gaps = 2/173 (1%)
Query: 502 GWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCY 561
G +A LLDEM G++ + Y SL+ + NR +E AL + G+ D +
Sbjct: 405 GDAKRAFGLLDEMVGKGIQPTLVTYTSLIYVLGKRNRMKEADALFSKIQQEGLLPDIIVF 464
Query: 562 EALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVK 621
AL+ + A L KEM K+ + L++G + + +LL E+K
Sbjct: 465 NALIDGHCANGNIDRAFQLLKEMDNMKV-LPDEITYNTLMQGYCREGKVEEARQLLDEMK 523
Query: 622 EGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTG 674
+ I +N +I + K+ M+DA + M + G P T+++++ G
Sbjct: 524 R-RGIKPDHISYNTLISGYSKRGDMKDAFRVRDEMMTTGFDPTILTYNALIQG 575
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/251 (21%), Positives = 108/251 (43%), Gaps = 7/251 (2%)
Query: 502 GWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCY 561
G L++A L+ +M G+ ++ Y +L+ Y + A + S GI Y
Sbjct: 300 GRLEEASGLICKMLEGGLVPNAVTYNALIDGYCNKGDLDKAYAYRDEMISKGIMASLVTY 359
Query: 562 EALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVK 621
+ + ++ A ++ KEM+E + +L+ G + +A LL E+
Sbjct: 360 NLFIHALFMEGRMGDADNMIKEMREKGMMPDAVTH-NILINGYCRCGDAKRAFGLLDEMV 418
Query: 622 EGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGK 681
G+ I + + ++I+ K+ M++A+ +++ G LP+ F++++ G+ A G
Sbjct: 419 -GKGIQPTLVTYTSLIYVLGKRNRMKEADALFSKIQQEGLLPDIIVFNALIDGHCA-NGN 476
Query: 682 YTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFIDKY 741
+L EM + DE ++++ + R G A +++ M+ + D
Sbjct: 477 IDRAFQLLKEMDNMKVLP----DEITYNTLMQGYCREGKVEEARQLLDEMKRRGIKPDHI 532
Query: 742 KYRTLFLKYHK 752
Y TL Y K
Sbjct: 533 SYNTLISGYSK 543
Score = 53.1 bits (126), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 90/429 (20%), Positives = 153/429 (35%), Gaps = 68/429 (15%)
Query: 247 IAMKPNTNTFNIALAGCLLFETTRKAEQLLDIMPRIGVKADSNLLIIMAHIYERNGRREE 306
+ +KPN T+N + G L ++A + M G++ D + GR EE
Sbjct: 245 LGVKPNVVTYNTIIHGHCLRGKFQRARVIFQTMKDKGLEPDCYTYNSFISGLCKEGRLEE 304
Query: 307 LRKLQRHIDEAVNLSDIQFRQFYNCLLSCHLKFGDLNSASKMVLEMLQRAKEARNSLAAA 366
L I + + + YN L+ + GDL+ A EM+ + A SL
Sbjct: 305 ASGL---ICKMLEGGLVPNAVTYNALIDGYCNKGDLDKAYAYRDEMISKGIMA--SLVTY 359
Query: 367 MLPFNAVGVNNRTPSEQNVNCTNSVDLENSGIIEN---HILSYEDFTKDRKFVALEAEVK 423
L +A+ + R N+ ++ G++ + H + + + + K
Sbjct: 360 NLFIHALFMEGRMGDADNM----IKEMREKGMMPDAVTHNILINGYCRC-------GDAK 408
Query: 424 RVLQTLLGMLQKQVELITTEHGILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQ 483
R L M+ K + QPT Y L+ + + KE K ++E L
Sbjct: 409 RAFGLLDEMVGKGI----------QPTLVTYTSLIYVLGKRNRMKEADALFSKIQQEGLL 458
Query: 484 VSHDDAALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVT 543
D +I + G +D+A LL EM V Y +L++ Y + E
Sbjct: 459 --PDIIVFNALIDGHCANGNIDRAFQLLKEMDNMKVLPDEITYNTLMQGYCREGKVEEAR 516
Query: 544 ALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKG 603
LL + + GI+ D Y L+ + D A + EM +
Sbjct: 517 QLLDEMKRRGIKPDHISYNTLISGYSKRGDMKDAFRVRDEMMTTG--------------- 561
Query: 604 CAQNHEAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLP 663
D + +N +I CK + + AE+ LK M S G P
Sbjct: 562 ----------------------FDPTILTYNALIQGLCKNQEGEHAEELLKEMVSKGITP 599
Query: 664 NAQTFHSMV 672
+ T+ S++
Sbjct: 600 DDSTYLSII 608
Score = 43.5 bits (101), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 66/327 (20%), Positives = 131/327 (40%), Gaps = 38/327 (11%)
Query: 456 KLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQAHDLLDEMH 515
+++ FL+ +T+ +++ AE + + +I + G L +A + + M
Sbjct: 186 QMLSLFLKLNRTQ--MAWVLYAEMFRMNIRSSLYTFNIMINVLCKEGKLKKAKEFIGHME 243
Query: 516 LAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQKDTP 575
GV+ + Y +++ + + + + + + G++ D Y + + +
Sbjct: 244 TLGVKPNVVTYNTIIHGHCLRGKFQRARVIFQTMKDKGLEPDCYTYNSFISGLCKEGRLE 303
Query: 576 GALHLFKEMKESK-IPRSGHQEFEMLVKG-CAQNHEAGLMAKLLQEVKEGQRIDCGVHDW 633
A L +M E +P + + L+ G C + A + + +G I + +
Sbjct: 304 EASGLICKMLEGGLVPNA--VTYNALIDGYCNKGDLDKAYAYRDEMISKG--IMASLVTY 359
Query: 634 NNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIG-------------G 680
N IH + M DA+ +K MR G +P+A T + ++ GY G G
Sbjct: 360 NLFIHALFMEGRMGDADNMIKEMREKGMMPDAVTHNILINGYCRCGDAKRAFGLLDEMVG 419
Query: 681 K--------YTEVTELWGE---MKSFASSTSMNFDEELL-DSVLYTFVRGGFFA-----R 723
K YT + + G+ MK + S E LL D +++ + G A R
Sbjct: 420 KGIQPTLVTYTSLIYVLGKRNRMKEADALFSKIQQEGLLPDIIVFNALIDGHCANGNIDR 479
Query: 724 ANEVVAMMEEGKMFIDKYKYRTLFLKY 750
A +++ M+ K+ D+ Y TL Y
Sbjct: 480 AFQLLKEMDNMKVLPDEITYNTLMQGY 506
Score = 40.4 bits (93), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 43/208 (20%), Positives = 89/208 (42%), Gaps = 40/208 (19%)
Query: 510 LLDEMHLAGVRASSS---VYASLLKAYIEANRPREVTALLRDARSAG------------- 553
+ DE+ LA R + ++ L++AY E +P E + G
Sbjct: 130 IFDELALARDRVDAKTTLIFDLLVRAYCELKKPNEALECFYLIKEKGFVPNIETCNQMLS 189
Query: 554 --IQLDASCYEALLQSKIVQKDTPGALHLFKEM-----KESKIPRS----GHQE------ 596
++L+ + +L +++ + + +L+ F M KE K+ ++ GH E
Sbjct: 190 LFLKLNRTQMAWVLYAEMFRMNIRSSLYTFNIMINVLCKEGKLKKAKEFIGHMETLGVKP 249
Query: 597 ----FEMLVKGCAQNHEAGLMAKLLQEVKE-GQRIDCGVHDWNNVIHFFCKKRLMQDAEK 651
+ ++ G + + Q +K+ G DC + +N+ I CK+ +++A
Sbjct: 250 NVVTYNTIIHGHCLRGKFQRARVIFQTMKDKGLEPDC--YTYNSFISGLCKEGRLEEASG 307
Query: 652 ALKRMRSLGHLPNAQTFHSMVTGYAAIG 679
+ +M G +PNA T+++++ GY G
Sbjct: 308 LICKMLEGGLVPNAVTYNALIDGYCNKG 335
>gi|255661028|gb|ACU25683.1| pentatricopeptide repeat-containing protein [Citharexylum
montevidense]
Length = 376
Score = 56.2 bits (134), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 57/251 (22%), Positives = 109/251 (43%), Gaps = 8/251 (3%)
Query: 443 EHGILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLG 502
E G ++ + Y LV F + G + H L A++E + D A +I+ +G
Sbjct: 87 ESGFVEDSTT-YGILVHGFCKNGYNNKSLHVLEIAKQEGGAL--DAFAYSAMISGLCKMG 143
Query: 503 WLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYE 562
LD+A +L+ M +G + ++ VY +L+ + A++ + + ++ + Y
Sbjct: 144 KLDKAVSVLNGMIESGCKPNTQVYNALINGLLGASKFEDAIRVFKELGTRHCSPTIVTYN 203
Query: 563 ALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEV-K 621
L+ + A L KEM E S + +L+KG Q+H+ + +L +V
Sbjct: 204 TLINGLCKGERFAEAYDLVKEMLEKGWNPS-VITYSLLIKGLCQDHKVEMALQLWNQVIS 262
Query: 622 EGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGK 681
+G + D +H N +IH C + A + M PN T+++++ G+ GG
Sbjct: 263 KGFKPDVQMH--NILIHGLCSVGKTEHASELYFDMNHWNCAPNLVTYNTLMEGFYK-GGD 319
Query: 682 YTEVTELWGEM 692
+W +
Sbjct: 320 TRNALVIWARI 330
Score = 43.5 bits (101), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 46/230 (20%), Positives = 92/230 (40%), Gaps = 9/230 (3%)
Query: 447 LQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQ 506
+ P +Y ++ F +AG+ K +E S + A+ ++ + G +D+
Sbjct: 21 ISPDAVVYNAMLNGFFKAGRIKNCFDLWELMGREG---SRNVASFNTMMRGLFNNGEVDE 77
Query: 507 AHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQ 566
+ + M +G S+ Y L+ + + + +L A+ G LDA Y A++
Sbjct: 78 VFSIWELMKESGFVEDSTTYGILVHGFCKNGYNNKSLHVLEIAKQEGGALDAFAYSAMIS 137
Query: 567 SKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRI 626
A+ + M ES + Q + L+ G + ++ +E+ G R
Sbjct: 138 GLCKMGKLDKAVSVLNGMIESGC-KPNTQVYNALINGLLGASKFEDAIRVFKEL--GTR- 193
Query: 627 DCG--VHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTG 674
C + +N +I+ CK +A +K M G P+ T+ ++ G
Sbjct: 194 HCSPTIVTYNTLINGLCKGERFAEAYDLVKEMLEKGWNPSVITYSLLIKG 243
>gi|125580966|gb|EAZ21897.1| hypothetical protein OsJ_05550 [Oryza sativa Japonica Group]
Length = 595
Score = 56.2 bits (134), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 38/178 (21%), Positives = 83/178 (46%), Gaps = 6/178 (3%)
Query: 504 LDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEA 563
L++A + + A + YA LL+AY A ++ + R GI +A+ Y A
Sbjct: 191 LNKAESIYMALLEAQCVPTEDTYALLLRAYCNAGSLHRAEGVISEMREHGIPPNATVYNA 250
Query: 564 LLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEG 623
L + + T A+ +++ MK + R+ + F +++ + + K+ E+K
Sbjct: 251 YLDGLLKARCTEKAVEVYQRMKRERC-RANTETFTLMINVYGKAKQPMSSMKVFNEMKS- 308
Query: 624 QRIDC--GVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIG 679
I C + + +++ F ++ L + AE+ + M+ GH P+ +++++ Y+ G
Sbjct: 309 --IGCKPNICTYTALVNAFAREGLCEKAEEVFEEMQQAGHEPDVYAYNALMEAYSRAG 364
>gi|356577073|ref|XP_003556653.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
mitochondrial-like [Glycine max]
Length = 581
Score = 56.2 bits (134), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 84/199 (42%), Gaps = 5/199 (2%)
Query: 482 LQVSHDDAALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPRE 541
S D +I C G A D L M +GV S++ + ++L A E
Sbjct: 259 FMCSPDVVTYNILINACCVGGRTSVAIDWLHSMVRSGVEPSAATFTTILHALCREGNVVE 318
Query: 542 VTALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLV 601
L + GI +A+ Y L+ ++ A L++EM+ + F +LV
Sbjct: 319 AQKLFDGIQDVGIAPNAAMYNTLMDGYFKVREVGQASLLYEEMRRKGVSPDC-VTFNILV 377
Query: 602 KGCAQNHEAGLMAKLLQE-VKEGQRIDCGVHD---WNNVIHFFCKKRLMQDAEKALKRMR 657
G + + +LL++ + G +DC + D +N +I +CK M A + +M
Sbjct: 378 GGHYKYGRKEDLNRLLKDSILSGLFLDCLLPDIFTFNILIGGYCKTFDMVGASEIFNKMY 437
Query: 658 SLGHLPNAQTFHSMVTGYA 676
S G P+ T+++ + GY
Sbjct: 438 SCGLDPDITTYNTRMHGYC 456
>gi|449457845|ref|XP_004146658.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g46100-like [Cucumis sativus]
gi|449484609|ref|XP_004156929.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g46100-like [Cucumis sativus]
Length = 501
Score = 56.2 bits (134), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 62/308 (20%), Positives = 126/308 (40%), Gaps = 27/308 (8%)
Query: 459 KAFLEAGKTKELTHF--LIKAEKENLQV---------------SHDDAALGHVITLCISL 501
KA + KT TH LI+AE++ + HD +I+ IS
Sbjct: 33 KAMFKWAKTVTPTHVQQLIQAERDIKKALIIFDSATAEYANGFKHDLNTFSLMISKLISA 92
Query: 502 GWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCY 561
A LLD M + + + S+ +AY ++P + + + + Y
Sbjct: 93 NQFRLAETLLDRMKEEKIDVTEDILLSICRAYGRIHKPLDSIRVFHKMQDFHCKPTEKSY 152
Query: 562 EALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVK 621
++L + + A +++M++ IP + +L+K +N +G M K + +
Sbjct: 153 ISVLAILVEENQLKSAFRFYRDMRKMGIPPTV-TSLNVLIKAFCKN--SGTMDKAMHLFR 209
Query: 622 EGQRIDC--GVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIG 679
C + + +I+ C+ R + +A++ L+ M + G P+ T+ S++ G +
Sbjct: 210 TMSNHGCEPDSYTYGTLINGLCRFRSIVEAKELLQEMETKGCSPSVVTYTSIIHGLCQLN 269
Query: 680 GKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFID 739
E L +MK ++ L+D F + G +RA +++ +M + ++ +
Sbjct: 270 N-VDEAMRLLEDMKDKNIEPNVFTYSSLMDG----FCKTGHSSRARDILELMIQKRLRPN 324
Query: 740 KYKYRTLF 747
Y TL
Sbjct: 325 MISYSTLL 332
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 52/267 (19%), Positives = 107/267 (40%), Gaps = 10/267 (3%)
Query: 431 GMLQKQVELITTEHGI----LQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSH 486
G + K ++ I H + +PTEK YI ++ +E + K F K + +
Sbjct: 125 GRIHKPLDSIRVFHKMQDFHCKPTEKSYISVLAILVEENQLKSAFRFYRDMRK--MGIPP 182
Query: 487 DDAALGHVI-TLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTAL 545
+L +I C + G +D+A L M G S Y +L+ E L
Sbjct: 183 TVTSLNVLIKAFCKNSGTMDKAMHLFRTMSNHGCEPDSYTYGTLINGLCRFRSIVEAKEL 242
Query: 546 LRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCA 605
L++ + G Y +++ + A+ L ++MK+ I + ++ C
Sbjct: 243 LQEMETKGCSPSVVTYTSIIHGLCQLNNVDEAMRLLEDMKDKNIEPNVFTYSSLMDGFCK 302
Query: 606 QNHEAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNA 665
H + A+ + E+ +R+ + ++ +++ C + + +A + RM+ G P+A
Sbjct: 303 TGHSS--RARDILELMIQKRLRPNMISYSTLLNGLCNEGKINEALEIFDRMKLQGFKPDA 360
Query: 666 QTFHSMVTGYAAIGGKYTEVTELWGEM 692
+ +V + ++ E EM
Sbjct: 361 GLYGKIVNCLCDV-SRFQEAANFLDEM 386
>gi|15221300|ref|NP_177597.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169839|sp|Q9CA58.1|PP120_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At1g74580
gi|12324819|gb|AAG52381.1|AC011765_33 hypothetical protein; 77097-79388 [Arabidopsis thaliana]
gi|332197491|gb|AEE35612.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 763
Score = 56.2 bits (134), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 48/264 (18%), Positives = 109/264 (41%), Gaps = 39/264 (14%)
Query: 451 EKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQAHDL 510
E +Y+ +K + GK +E + + + + + + + ++++ + G+ DQAH +
Sbjct: 76 EGVYVGAMKNYGRKGKVQEAVNVFERMDFYDCEPTV--FSYNAIMSVLVDSGYFDQAHKV 133
Query: 511 LDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIV 570
M G+ + +K++ + +RP LL + S G +++ Y ++
Sbjct: 134 YMRMRDRGITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYE 193
Query: 571 QKDTPGALHLFKEMKESKIP--------------RSGHQE-------------------- 596
+ LF +M S + + G +
Sbjct: 194 ENFKAEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFT 253
Query: 597 FEMLVKGCAQNHEAGLMAKLLQ-EVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKR 655
+ + ++G Q E +++ +++G + D V +NN+I+ CK Q+AE L +
Sbjct: 254 YNLFIQGLCQRGELDGAVRMVGCLIEQGPKPD--VITYNNLIYGLCKNSKFQEAEVYLGK 311
Query: 656 MRSLGHLPNAQTFHSMVTGYAAIG 679
M + G P++ T+++++ GY G
Sbjct: 312 MVNEGLEPDSYTYNTLIAGYCKGG 335
Score = 55.8 bits (133), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 77/178 (43%), Gaps = 5/178 (2%)
Query: 504 LDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEA 563
++ A ++LD M GV Y SLL + ++ +V + G + +
Sbjct: 477 MENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNI 536
Query: 564 LLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEG 623
LL+S + AL L +EMK + F L+ G +N + L ++++E
Sbjct: 537 LLESLCRYRKLDEALGLLEEMKNKSV-NPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEA 595
Query: 624 QRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRM--RSLGHLPNAQTFHSMVTGYAAIG 679
++ +N +IH F +K + AEK + M R LG P+ T+ MV G+ G
Sbjct: 596 YKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLG--PDGYTYRLMVDGFCKTG 651
Score = 52.8 bits (125), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 76/172 (44%), Gaps = 2/172 (1%)
Query: 506 QAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALL 565
+A L +M G+ S Y +L+ Y + + ++ DA G D Y +L+
Sbjct: 304 EAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLI 363
Query: 566 QSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQR 625
+ +T AL LF E I + + L+KG + A+L E+ E
Sbjct: 364 DGLCHEGETNRALALFNEALGKGI-KPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGL 422
Query: 626 IDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAA 677
I V +N +++ CK + DA+ +K M S G+ P+ TF+ ++ GY+
Sbjct: 423 IP-EVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYST 473
>gi|410110147|gb|AFV61153.1| pentatricopeptide repeat-containing protein 123, partial [Phyla
nodiflora]
Length = 419
Score = 56.2 bits (134), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 52/255 (20%), Positives = 118/255 (46%), Gaps = 25/255 (9%)
Query: 447 LQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQ---VSHDDAALGHVITLCISLGW 503
++P Y L++ + +A E H +++N++ V+++ + + TL
Sbjct: 165 IEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMIMIYGKTL-----E 219
Query: 504 LDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEA 563
++A++L+ EM G+ +S Y++++ + + + L + RS+G+++D +
Sbjct: 220 HEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEID----QI 275
Query: 564 LLQSKIVQKDTPG----ALHLFKEMKE-SKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQ 618
L Q+ IV + G A L E+K IPR ++ G + EA + + Q
Sbjct: 276 LFQTMIVAYERAGLVAHAKRLLHELKRPDNIPRDTAIH---ILAGAGRIEEATYVFR--Q 330
Query: 619 EVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAI 678
+ G+ D V + +IH K + + + +MR LG+ P++ ++ Y +
Sbjct: 331 AIDSGEVKDITV--FERMIHLLSKYKKYMNVVEVFDKMRGLGYFPDSNVIAVVLNAYGKL 388
Query: 679 GGKYTEVTELWGEMK 693
++ + ++++ EM+
Sbjct: 389 -HEFDKASDIYMEMQ 402
Score = 44.3 bits (103), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 54/278 (19%), Positives = 113/278 (40%), Gaps = 38/278 (13%)
Query: 484 VSHDDAALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVT 543
V D ++I L L +A + + +G Y +++ + +A RE
Sbjct: 25 VPGDLVLXSNLIELSRKLCDYSKAISIFSRLKXSGXXPDLXAYNAMINVFGKAKLFREAR 84
Query: 544 ALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESK--------------- 588
+L+ + ++AG+ + Y LL + AL +F EM+E K
Sbjct: 85 SLIXEMKTAGVMPXTTSYSTLLTMYVENXKFLEALSVFSEMREXKCLXDLXTCNIMIDVY 144
Query: 589 ----IPRSGHQEFEMLVK-GCAQN-----------HEAGLMAKLLQEVKEGQR--IDCGV 630
+ + + F + K G N +A L + + + QR I+ V
Sbjct: 145 GQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNV 204
Query: 631 HDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWG 690
+N++I + K + A ++ M+S G PN+ T+ ++++ + + GK L+
Sbjct: 205 VTYNSMIMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKV-GKLDRAAMLFQ 263
Query: 691 EMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVV 728
+++ S+ + D+ L +++ + R G A A ++
Sbjct: 264 KLR----SSGVEIDQILFQTMIVAYERAGLVAHAKRLL 297
>gi|326529783|dbj|BAK04838.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 490
Score = 56.2 bits (134), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 84/191 (43%), Gaps = 10/191 (5%)
Query: 518 GVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQKDTPGA 577
G+ Y+SLL+ + + R E LL R +G DA Y +L+S + A
Sbjct: 129 GITPDVITYSSLLQCFCDMKRTEEALDLLLH-RVSGDLPDAISYSVILKSFCDDGRSQCA 187
Query: 578 LHLFKEMKESKIPRSGHQ-EFEMLVKGCAQNHEAGLMAKLLQE-VKEGQRIDCGVHDWNN 635
L L + M E S + +++ G + E L +++G D V +N+
Sbjct: 188 LDLLRMMAEKGAEHSPSVVSYNLVIHGFFKEGEISKACHLFHGMIQQGYVPD--VVTYNS 245
Query: 636 VIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGG-----KYTEVTELWG 690
VI+ CK R M AE L+ M P+A T++S++ GY +G + +V G
Sbjct: 246 VINALCKARAMDKAEVVLRSMVHNSVQPDAVTYNSLIHGYLILGQLKETFRLLKVMRSQG 305
Query: 691 EMKSFASSTSM 701
M S + +S+
Sbjct: 306 VMPSLVTCSSV 316
>gi|124360736|gb|ABN08713.1| Pentatricopeptide repeat [Medicago truncatula]
Length = 479
Score = 56.2 bits (134), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 63/302 (20%), Positives = 123/302 (40%), Gaps = 12/302 (3%)
Query: 448 QPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQA 507
Q T + +L+KA + KT L F E+ + HD G +I +S+ A
Sbjct: 12 QITNSLVEQLIKAEKDINKT--LVMFDSATEEYSNGFRHDHNTFGAMIHRLVSVNQFRPA 69
Query: 508 HDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQS 567
+L+ M + V+ ++ + Y +RP + + ++ Y +
Sbjct: 70 EGMLERMKQEDCEVTEDVFLTICRGYGRVHRPLDAIRVFHKMEDFQVKPTQKSYLTVFDI 129
Query: 568 KIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMA-KLLQEV-KEGQR 625
+ + A+ +KEM+E IP + +L+K +N E A +L +E+ G +
Sbjct: 130 LVEENHVKRAIGFYKEMREKGIPPT-VVSLNILIKALCKNEETVESAFRLFREMPNRGCQ 188
Query: 626 IDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEV 685
D + + +I+ CK + A++ L M G P+ ++ S++ G E
Sbjct: 189 PDS--YTYGTLINGLCKLGKISQAKELLDEMEEKGLSPSVVSYTSLIHGLCQ-SNNLDEA 245
Query: 686 TELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFIDKYKYRT 745
EL EM ++ L+D + + G ++A E++ +M ++ + Y T
Sbjct: 246 IELLEEMIINGIEPNVFTYSSLMDGL----CKSGHSSQAMELLEVMVRRRLLPNMVTYST 301
Query: 746 LF 747
L
Sbjct: 302 LI 303
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 100/252 (39%), Gaps = 44/252 (17%)
Query: 443 EHGILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLG 502
E GI PT L+KA + +T E + F + E N D G +I LG
Sbjct: 148 EKGI-PPTVVSLNILIKALCKNEETVE-SAFRLFREMPNRGCQPDSYTYGTLINGLCKLG 205
Query: 503 WLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYE 562
+ QA +LLDEM G+ S Y SL+ ++N E LL + GI+ + Y
Sbjct: 206 KISQAKELLDEMEEKGLSPSVVSYTSLIHGLCQSNNLDEAIELLEEMIINGIEPNVFTYS 265
Query: 563 ALLQSKIVQKDTPGALHLFKEMKESKIPRSGH--QEFEMLVKGCAQNHEAGLMAKLLQEV 620
+L+ + +SGH Q E+L EV
Sbjct: 266 SLMDG---------------------LCKSGHSSQAMELL------------------EV 286
Query: 621 KEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGG 680
+R+ + ++ +I+ CK+ ++A + L RMR G P+A + +++G A
Sbjct: 287 MVRRRLLPNMVTYSTLINGLCKEGKHREAVEILDRMRLQGLKPDAGMYGRIISGLCA-AC 345
Query: 681 KYTEVTELWGEM 692
Y E EM
Sbjct: 346 NYQEAANFIDEM 357
>gi|413942671|gb|AFW75320.1| hypothetical protein ZEAMMB73_530230 [Zea mays]
Length = 542
Score = 56.2 bits (134), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 47/201 (23%), Positives = 98/201 (48%), Gaps = 8/201 (3%)
Query: 494 VITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAG 553
V+T + G L+ A L D++ +G R +++Y L+ Y + ++ ++ + +AG
Sbjct: 241 VLTAYCAKGDLEGAQQLFDDIIASGRRPDATMYTVLIDGYCHHRKLQDAARIMDEMGAAG 300
Query: 554 IQLDASCYEALLQSKIVQKDTPGALHLFKEM-KESKIPRSGHQEFEMLVKGCAQNHEAGL 612
+Q + Y ++++ ++ + A L +EM +P + +V Q+ +AG
Sbjct: 301 VQPNEVTYSVVIEACCKERKSTEARDLTREMLGAGYVPDT--PLCAKVVDVLCQDGKAGE 358
Query: 613 MAKLL-QEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSM 671
++ Q VK+ D V + +I++ CKK ++Q+A K + G LP+ T++S+
Sbjct: 359 ANEMWRQMVKKSVPPDNTVV--STLIYWLCKKGMVQEARKLFDELER-GFLPSLLTYNSL 415
Query: 672 VTGYAAIGGKYTEVTELWGEM 692
+ G G+ E +W +M
Sbjct: 416 IIGLCE-NGELQEAGRVWDDM 435
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/210 (23%), Positives = 92/210 (43%), Gaps = 8/210 (3%)
Query: 504 LDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEA 563
L A ++DEM AGV+ + Y+ +++A + + E L R+ AG D
Sbjct: 286 LQDAARIMDEMGAAGVQPNEVTYSVVIEACCKERKSTEARDLTREMLGAGYVPDTPLCAK 345
Query: 564 LLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQN--HEAGLMAKLLQEVK 621
++ A ++++M + +P ++ C + EA KL E++
Sbjct: 346 VVDVLCQDGKAGEANEMWRQMVKKSVPPDNTVVSTLIYWLCKKGMVQEA---RKLFDELE 402
Query: 622 EGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGK 681
G + +N++I C+ +Q+A + M + PNA T+ +++ G+ I GK
Sbjct: 403 RG--FLPSLLTYNSLIIGLCENGELQEAGRVWDDMVERRYEPNAMTYEALIKGFCKI-GK 459
Query: 682 YTEVTELWGEMKSFASSTSMNFDEELLDSV 711
E L+ EM S + S + L+DS+
Sbjct: 460 SNEGYALFKEMMSRGCTPSKFLYQALVDSL 489
>gi|15218325|ref|NP_172461.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122215618|sp|Q3EDF8.1|PPR28_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g09900
gi|332190391|gb|AEE28512.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 598
Score = 56.2 bits (134), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 74/353 (20%), Positives = 140/353 (39%), Gaps = 37/353 (10%)
Query: 447 LQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKEN-----------LQVSHDDAALGHVI 495
+ P Y ++++ ++GK K+ L + + + ++ + D+ +GH
Sbjct: 200 VSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGH-- 257
Query: 496 TLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQ 555
A LLDEM G Y L+ + R E L D S+G Q
Sbjct: 258 -----------AMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQ 306
Query: 556 LDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAK 615
+ + +L+S A L +M S F +L+ + GL+ +
Sbjct: 307 PNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPS-VVTFNILINFLCRK---GLLGR 362
Query: 616 LLQEVKEGQRIDCGVHD--WNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVT 673
+ +++ + C + +N ++H FCK++ M A + L+RM S G P+ T+++M+T
Sbjct: 363 AIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLT 422
Query: 674 GYAAIGGKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEE 733
GK + E+ ++ S S + ++D + G +A +++ M
Sbjct: 423 ALCK-DGKVEDAVEILNQLSSKGCSPVLITYNTVIDG----LAKAGKTGKAIKLLDEMRA 477
Query: 734 GKMFIDKYKYRTLFLKYHKTLYKGKTPKFQTE-AQLKKREAALGFKK-WLGLC 784
+ D Y +L + + KF E ++ R A+ F LGLC
Sbjct: 478 KDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLC 530
>gi|359481393|ref|XP_002276762.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g32630-like [Vitis vinifera]
Length = 625
Score = 56.2 bits (134), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 55/246 (22%), Positives = 101/246 (41%), Gaps = 11/246 (4%)
Query: 509 DLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSK 568
++L M GV + Y L+ + + E L + R GI+ D Y +++
Sbjct: 281 EILTLMEKEGVACNVVTYTLLIHGFSNIGKIEEAQRLFEEMREKGIEADVYVYTSIISCN 340
Query: 569 IVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLM--AKLLQEVKEGQRI 626
+ AL LF EM + + S H + L+ G + AG M A++L +G+ I
Sbjct: 341 CRSGNVKRALVLFDEMTDKGLIPSAHT-YGALIHGVCK---AGQMEAAQMLVNEMQGKGI 396
Query: 627 DCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVT 686
D +N +I +C+ ++ +A + M G + ++S+ +G + K
Sbjct: 397 DLNPVIFNTLIDGYCESGMVDEALRLQVVMEKKGLESDVFAYNSIASGLCKLNRKDEAKG 456
Query: 687 ELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFIDKYKYRTL 746
L+ ++ S +M+F +++ + + G F A V MEE + Y L
Sbjct: 457 LLFSMVERGVSPNTMSF-----TTLIDIYCKEGNFVEAKRVFREMEEKGNVPNIITYNVL 511
Query: 747 FLKYHK 752
Y K
Sbjct: 512 IDGYSK 517
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 56/250 (22%), Positives = 101/250 (40%), Gaps = 21/250 (8%)
Query: 500 SLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDAS 559
++G +++A L +EM G+ A VY S++ + + L + G+ A
Sbjct: 307 NIGKIEEAQRLFEEMREKGIEADVYVYTSIISCNCRSGNVKRALVLFDEMTDKGLIPSAH 366
Query: 560 CYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLM--AKLL 617
Y AL+ A L EM+ I + F L+ G E+G++ A L
Sbjct: 367 TYGALIHGVCKAGQMEAAQMLVNEMQGKGIDLN-PVIFNTLIDGYC---ESGMVDEALRL 422
Query: 618 QEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAA 677
Q V E + ++ V +N++ CK +A+ L M G PN +F +++ Y
Sbjct: 423 QVVMEKKGLESDVFAYNSIASGLCKLNRKDEAKGLLFSMVERGVSPNTMSFTTLIDIYCK 482
Query: 678 IGGKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMF 737
G + E ++ EM+ + ++ + Y + G+ R N M+E
Sbjct: 483 -EGNFVEAKRVFREMEEKGNVPNI---------ITYNVLIDGYSKRGN-----MKEAHKL 527
Query: 738 IDKYKYRTLF 747
D+ + R L
Sbjct: 528 KDELENRGLI 537
Score = 48.9 bits (115), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 57/253 (22%), Positives = 106/253 (41%), Gaps = 8/253 (3%)
Query: 442 TEHGILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISL 501
T+ G++ P+ Y L+ +AG+ E L+ E + + + +I
Sbjct: 357 TDKGLI-PSAHTYGALIHGVCKAGQM-EAAQMLVN-EMQGKGIDLNPVIFNTLIDGYCES 413
Query: 502 GWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCY 561
G +D+A L M G+ + Y S+ + NR E LL G+ + +
Sbjct: 414 GMVDEALRLQVVMEKKGLESDVFAYNSIASGLCKLNRKDEAKGLLFSMVERGVSPNTMSF 473
Query: 562 EALLQSKIVQKDTPGALHLFKEMKE-SKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEV 620
L+ + + A +F+EM+E +P + +L+ G ++ KL E+
Sbjct: 474 TTLIDIYCKEGNFVEAKRVFREMEEKGNVPNI--ITYNVLIDGYSKRGNMKEAHKLKDEL 531
Query: 621 KEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGG 680
E + + V+ ++IH C + A K M G +PN T+ +M++G + G
Sbjct: 532 -ENRGLIPDVYTCTSLIHGECIDGKVDMALKLFDEMPQRGLVPNVVTYTAMISGLSK-DG 589
Query: 681 KYTEVTELWGEMK 693
+ E +L+ EMK
Sbjct: 590 RSEEAFKLYDEMK 602
>gi|302766812|ref|XP_002966826.1| hypothetical protein SELMODRAFT_11024 [Selaginella moellendorffii]
gi|300164817|gb|EFJ31425.1| hypothetical protein SELMODRAFT_11024 [Selaginella moellendorffii]
Length = 484
Score = 56.2 bits (134), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 54/233 (23%), Positives = 101/233 (43%), Gaps = 11/233 (4%)
Query: 447 LQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQ 506
+QP Y L KA+ AG+ EL + A+ +N ++ + +I+ G ++
Sbjct: 201 MQPDAVTYNTLAKAYAAAGRVAELEDLI--ADMKNARLKPNLRTYAILISCYCQNGMPER 258
Query: 507 AHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSA-GIQLDASCYEALL 565
LL + G+ + +LLK Y + N + ++ D +A G++ D + Y ++
Sbjct: 259 GLQLLSRLKFEGLHPDVVAFNTLLKGYSQENDQQLKLEMVLDLMAANGVRPDVTTYSTIM 318
Query: 566 QSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKG---CAQNHEAGLMAKLLQEVKE 622
A + EM++ ++ + + F +L KG + HEA LLQ++
Sbjct: 319 NWWSSAGMADKAQTILLEMQQDRV-KPDVRAFAILAKGYVRSGRTHEA---ESLLQDMSL 374
Query: 623 GQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGY 675
+ V + +I +C M DA + L+ M G PN T ++V G+
Sbjct: 375 -HGVAPNVVVYTTIISGWCSMGRMDDALRVLELMLERGEAPNLNTVQTLVWGF 426
Score = 47.4 bits (111), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 51/247 (20%), Positives = 106/247 (42%), Gaps = 20/247 (8%)
Query: 448 QPTEKIYIKLVKAFLEAGKTKELTHFLIKA-EKENLQVSHDDA----------ALGHVIT 496
+PT Y L+K + AG+ ++ ++ K S +D + ++
Sbjct: 119 RPTTSTYNTLIKGYGVAGQAEQAQQLVLHLLNKTRNSPSSEDGLEPVARPNLRTMNTLLN 178
Query: 497 LCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQL 556
G L++A ++ + AG++ + Y +L KAY A R E+ L+ D ++A ++
Sbjct: 179 AWCREGRLEEAWRVVAMIKSAGMQPDAVTYNTLAKAYAAAGRVAELEDLIADMKNARLKP 238
Query: 557 DASCYEALLQSKIVQKDTP-GALHLFKEMKESKIPRSGHQE---FEMLVKGCAQNHEAGL 612
+ Y A+L S Q P L L +K + H + F L+KG +Q ++ L
Sbjct: 239 NLRTY-AILISCYCQNGMPERGLQLLSRLKFEGL----HPDVVAFNTLLKGYSQENDQQL 293
Query: 613 MAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMV 672
+++ ++ + V ++ +++++ + A+ L M+ P+ + F +
Sbjct: 294 KLEMVLDLMAANGVRPDVTTYSTIMNWWSSAGMADKAQTILLEMQQDRVKPDVRAFAILA 353
Query: 673 TGYAAIG 679
GY G
Sbjct: 354 KGYVRSG 360
Score = 45.8 bits (107), Expect = 0.100, Method: Compositional matrix adjust.
Identities = 39/192 (20%), Positives = 86/192 (44%), Gaps = 15/192 (7%)
Query: 516 LAGVRASSSVYASLLKAYIEANRPREVTALLRDARSA-GIQLDASCYEALLQSKIVQKDT 574
+ G R S Y + + + E LL+ G+ D+ C+ ++ +
Sbjct: 44 MQGHRPSVECYTVAIAEVVAEKKMSEAQQLLKQMEEEDGLAPDSVCFNTVINGWCNEGQM 103
Query: 575 PGALHLFKEMKESKIPRSGHQEFEMLVKG---CAQNHEAG-LMAKLLQEVKEGQRIDCGV 630
A+ + +EM++ R + L+KG Q +A L+ LL + + + G+
Sbjct: 104 EEAMRVVQEMRQKNC-RPTTSTYNTLIKGYGVAGQAEQAQQLVLHLLNKTRNSPSSEDGL 162
Query: 631 --------HDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKY 682
N +++ +C++ +++A + + ++S G P+A T++++ YAA G+
Sbjct: 163 EPVARPNLRTMNTLLNAWCREGRLEEAWRVVAMIKSAGMQPDAVTYNTLAKAYAA-AGRV 221
Query: 683 TEVTELWGEMKS 694
E+ +L +MK+
Sbjct: 222 AELEDLIADMKN 233
Score = 45.4 bits (106), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 35/145 (24%), Positives = 71/145 (48%), Gaps = 10/145 (6%)
Query: 615 KLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTG 674
+LL++++E + +N VI+ +C + M++A + ++ MR P T+++++ G
Sbjct: 72 QLLKQMEEEDGLAPDSVCFNTVINGWCNEGQMEEAMRVVQEMRQKNCRPTTSTYNTLIKG 131
Query: 675 YAAIGGKYTEVTELWGEM--KSFASSTSMNFDEEL-------LDSVLYTFVRGGFFARAN 725
Y + G+ + +L + K+ S +S + E + ++++L + R G A
Sbjct: 132 YG-VAGQAEQAQQLVLHLLNKTRNSPSSEDGLEPVARPNLRTMNTLLNAWCREGRLEEAW 190
Query: 726 EVVAMMEEGKMFIDKYKYRTLFLKY 750
VVAM++ M D Y TL Y
Sbjct: 191 RVVAMIKSAGMQPDAVTYNTLAKAY 215
Score = 44.3 bits (103), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 70/345 (20%), Positives = 141/345 (40%), Gaps = 28/345 (8%)
Query: 220 AAELILEIGYLFQDGRVDPRKKCNAPLIAMKPNTNTFNIALAGCLLFETTRKAEQLLDIM 279
A +L+L +L R P + +A +PN T N L +A +++ ++
Sbjct: 141 AQQLVL---HLLNKTRNSPSSEDGLEPVA-RPNLRTMNTLLNAWCREGRLEEAWRVVAMI 196
Query: 280 PRIGVKADSNLLIIMAHIYERNGRREELRKLQRHIDEAVNLSDIQFRQFYNCLLSCHLKF 339
G++ D+ +A Y GR EL L + A +++ Y L+SC+ +
Sbjct: 197 KSAGMQPDAVTYNTLAKAYAAAGRVAELEDLIADMKNARLKPNLRT---YAILISCYCQ- 252
Query: 340 GDLNSASKMVLEMLQRAKEARNSLAAAMLPFNAVGVNNRTPSEQNVNCTNSVDLENSGII 399
N + L++L R K L ++ FN + ++Q + +DL + +
Sbjct: 253 ---NGMPERGLQLLSRLK--FEGLHPDVVAFNTLLKGYSQENDQQLKLEMVLDLMAANGV 307
Query: 400 ENHILSYEDFTKDRKFVALEAEVKRVLQTLLGMLQKQVELITTEHGILQPTEKIYIKLVK 459
+ +Y + + + +L L M Q +V +P + + L K
Sbjct: 308 RPDVTTYSTIMNWWSSAGMADKAQTIL---LEMQQDRV----------KPDVRAFAILAK 354
Query: 460 AFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQAHDLLDEMHLAGV 519
++ +G+T E L V+ + +I+ S+G +D A +L+ M G
Sbjct: 355 GYVRSGRTHEAESLLQDMSLHG--VAPNVVVYTTIISGWCSMGRMDDALRVLELMLERGE 412
Query: 520 RASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEAL 564
+ + +L+ + EA +PRE ++ +AG+ +D+ C + +
Sbjct: 413 APNLNTVQTLVWGFCEARQPREAEEMVAAMAAAGLPVDSKCLDMI 457
>gi|224107129|ref|XP_002314384.1| predicted protein [Populus trichocarpa]
gi|222863424|gb|EEF00555.1| predicted protein [Populus trichocarpa]
Length = 764
Score = 56.2 bits (134), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 61/253 (24%), Positives = 109/253 (43%), Gaps = 18/253 (7%)
Query: 485 SHDDAALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTA 544
S D A +I G +D A+ + + M A + VY SL++ + + +R +
Sbjct: 337 SPDGATFCSLIDGLGKQGRVDDAYRIYERMLDADQIPNVVVYTSLIRNFFKCDRKEDGHK 396
Query: 545 LLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESK-IPRSGHQEFEMLVKG 603
+ ++ +G D + +T LF+E+K +P + + + +L+
Sbjct: 397 MYKEMMRSGCSPDLMLLNTYMDCVFKAGETEKGRALFEEIKARGFLPDT--RSYSILIHS 454
Query: 604 CAQNHEAGLMAKLLQEVKE-GQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHL 662
+ A +L +K+ G +D +N VI FCK + A + L+ M+++GH
Sbjct: 455 LVKAGFARETYELYYAMKDQGCVLD--TRAYNTVIDGFCKSGKVNKAYQLLEEMKTMGHH 512
Query: 663 PNAQTFHSMVTGYAAIGGKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGF-- 720
P T+ S+V G A I + E L+ E KS L+ V+Y+ + GF
Sbjct: 513 PTVVTYGSVVDGLAKI-DRLDEAYMLFEEAKSNGIE---------LNQVIYSSLIDGFGK 562
Query: 721 FARANEVVAMMEE 733
R +E +MEE
Sbjct: 563 VGRVDEAYLVMEE 575
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 107/235 (45%), Gaps = 12/235 (5%)
Query: 449 PTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQAH 508
P + Y L+ + ++AG +E T+ L A K+ V D A VI G +++A+
Sbjct: 443 PDTRSYSILIHSLVKAGFARE-TYELYYAMKDQGCV-LDTRAYNTVIDGFCKSGKVNKAY 500
Query: 509 DLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQ-- 566
LL+EM G + Y S++ + +R E L +A+S GI+L+ Y +L+
Sbjct: 501 QLLEEMKTMGHHPTVVTYGSVVDGLAKIDRLDEAYMLFEEAKSNGIELNQVIYSSLIDGF 560
Query: 567 SKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRI 626
K+ + D A + +EM + + + + + L+ G + E Q +K+ +
Sbjct: 561 GKVGRVDE--AYLVMEEMMQKGLTPNVYT-WNCLLDGLVKAEEINEALVCFQSMKD---L 614
Query: 627 DCGVHD--WNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIG 679
C + + +I+ CK R A + M+ G PN T+ +M++G A G
Sbjct: 615 KCTPNQITYCILINGLCKVRKFNKAFVFWQEMQKQGLKPNTITYTAMISGLAKSG 669
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 50/262 (19%), Positives = 112/262 (42%), Gaps = 9/262 (3%)
Query: 452 KIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAAL--GHVITLCISLGWLDQAHD 509
+ Y ++ F ++GK + L +E + H + G V+ + LD+A+
Sbjct: 481 RAYNTVIDGFCKSGKVNKAYQLL----EEMKTMGHHPTVVTYGSVVDGLAKIDRLDEAYM 536
Query: 510 LLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKI 569
L +E G+ + +Y+SL+ + + R E ++ + G+ + + LL +
Sbjct: 537 LFEEAKSNGIELNQVIYSSLIDGFGKVGRVDEAYLVMEEMMQKGLTPNVYTWNCLLDGLV 596
Query: 570 VQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRIDCG 629
++ AL F+ MK+ K + +L+ G + + QE+++ Q +
Sbjct: 597 KAEEINEALVCFQSMKDLKCT-PNQITYCILINGLCKVRKFNKAFVFWQEMQK-QGLKPN 654
Query: 630 VHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELW 689
+ +I K + A +R R+ G +P++ ++++M+ G +I + + +L+
Sbjct: 655 TITYTAMISGLAKSGNVAQASSLFERFRASGGIPDSASYNAMIEGL-SIANRALDAYQLF 713
Query: 690 GEMKSFASSTSMNFDEELLDSV 711
E + S LLD++
Sbjct: 714 EETRLKGCSIHTKTCVALLDAL 735
Score = 45.4 bits (106), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 53/229 (23%), Positives = 90/229 (39%), Gaps = 9/229 (3%)
Query: 453 IYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQAHDLLD 512
+Y + F + GK F + + L DD ++ + LD+A ++ +
Sbjct: 133 LYNVCIDCFGKVGKVDMAWKFFHEMKANGL--VPDDVTYTSMMGVLCKANRLDEAVEIFE 190
Query: 513 EMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQK 572
+M + Y +++ Y A + E +LL R+ G Y +L +
Sbjct: 191 QMEQNRQVPCAYAYNTMIMGYGSAGKFDEAYSLLERQRAKGCIPSVVAYNCILTCLGKKG 250
Query: 573 DTPGALHLFKEMKESKIPR--SGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRIDCGV 630
T AL +F+EMK +P + + ML K A N EA K+ +KE V
Sbjct: 251 KTDKALRIFEEMKRDAMPNLPTYNIIIGMLCK--AGNVEAAF--KVRDAMKEAGLFP-NV 305
Query: 631 HDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIG 679
N +I CK + + +A + M P+ TF S++ G G
Sbjct: 306 RTINIMIDRLCKAQKLDEACSIFEGMDYKVCSPDGATFCSLIDGLGKQG 354
Score = 44.7 bits (104), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 40/196 (20%), Positives = 81/196 (41%), Gaps = 3/196 (1%)
Query: 493 HVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSA 552
++ C+ L +A DLL M R + S Y +L+ A E + AL +
Sbjct: 31 ELVASCVKSRKLIEAFDLLQMMRHFKFRPAFSAYTTLIGALSEVGESDRMLALFNQMQEL 90
Query: 553 GIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGL 612
G +++ L++ + AL L EMK + + + + + + + +
Sbjct: 91 GYEVNVHLLTTLIRVFSREGRVDAALSLLDEMKSNTFD-ADIVLYNVCIDCFGKVGKVDM 149
Query: 613 MAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMV 672
K E+K + V + +++ CK + +A + ++M +P A +++M+
Sbjct: 150 AWKFFHEMKANGLVPDDVT-YTSMMGVLCKANRLDEAVEIFEQMEQNRQVPCAYAYNTMI 208
Query: 673 TGYAAIGGKYTEVTEL 688
GY + GK+ E L
Sbjct: 209 MGYGS-AGKFDEAYSL 223
>gi|15232008|ref|NP_187518.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207466|sp|Q9SS81.1|PP221_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g09060
gi|5923671|gb|AAD56322.1|AC009326_9 hypothetical protein [Arabidopsis thaliana]
gi|332641194|gb|AEE74715.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 687
Score = 56.2 bits (134), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 49/257 (19%), Positives = 110/257 (42%), Gaps = 4/257 (1%)
Query: 448 QPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQA 507
+P + Y L+ AF+EA + ++ A E V+ + +I + ++A
Sbjct: 111 EPAIRSYNTLLNAFVEAKQWVKVESLF--AYFETAGVAPNLQTYNVLIKMSCKKKEFEKA 168
Query: 508 HDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQS 567
LD M G + Y++++ +A + + L + G+ D +CY L+
Sbjct: 169 RGFLDWMWKEGFKPDVFSYSTVINDLAKAGKLDDALELFDEMSERGVAPDVTCYNILIDG 228
Query: 568 KIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRID 627
+ +KD A+ L+ + E + +++ G ++ K+ + +K+ +R +
Sbjct: 229 FLKEKDHKTAMELWDRLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNER-E 287
Query: 628 CGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTE 687
++ ++++IH C + AE + + T+++M+ G+ GK E E
Sbjct: 288 KDLYTYSSLIHGLCDAGNVDKAESVFNELDERKASIDVVTYNTMLGGFCRC-GKIKESLE 346
Query: 688 LWGEMKSFASSTSMNFD 704
LW M+ S ++++
Sbjct: 347 LWRIMEHKNSVNIVSYN 363
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 58/276 (21%), Positives = 110/276 (39%), Gaps = 44/276 (15%)
Query: 454 YIKLVKAFLEAGKTKELTHF--LIKAEKENLQVSHDDAALGHVI-TLCISLGWLDQAHDL 510
Y L+K LE GK E T L+ A+ + D G I LC++ G++++A +
Sbjct: 362 YNILIKGLLENGKIDEATMIWRLMPAK----GYAADKTTYGIFIHGLCVN-GYVNKALGV 416
Query: 511 LDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIV 570
+ E+ +G YAS++ + R E + L+++ G++L++ AL+ I
Sbjct: 417 MQEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIR 476
Query: 571 QKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEG------- 623
A +EM ++ R + +L+ G + + G + ++E+ E
Sbjct: 477 DSRLGEASFFLREMGKNGC-RPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLK 535
Query: 624 ------------QRIDCGVHDW---------------NNVIHFFCKKRLMQDAEKALKRM 656
++ID + W N +IH C + DA + M
Sbjct: 536 TYSILLCGLCRDRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANM 595
Query: 657 RSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEM 692
N T+++++ G+ +G T +WG M
Sbjct: 596 EHRNCTANLVTYNTLMEGFFKVGDS-NRATVIWGYM 630
>gi|449460167|ref|XP_004147817.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g19290-like [Cucumis sativus]
Length = 942
Score = 56.2 bits (134), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 68/348 (19%), Positives = 138/348 (39%), Gaps = 45/348 (12%)
Query: 435 KQVELITTEHGILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHV 494
K+V + +E GI + + Y L+K + + G+ ++ + ++NL V D+ G +
Sbjct: 311 KKVLALMSEKGIPE-NSRTYTLLIKGYCKRGQMEQAEKLIGCMMEKNLFV--DEHVYGVL 367
Query: 495 ITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGI 554
I + G +D A + D M G++ ++ + SL+ Y + + +L + +
Sbjct: 368 IHAYCTAGRVDDALRIRDAMLKVGLKMNTVICNSLINGYCKLGHVNKAAEVLVSMKDWNL 427
Query: 555 QLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRS--------------GHQEFEML 600
+ D+ Y LL Q+D A L EM + + GH E +
Sbjct: 428 KPDSYGYNTLLDGFCKQEDFIKAFKLCDEMHNKGVNFTVVTYNTLLKNLFHVGHVEHALH 487
Query: 601 V------KGCAQNHEAGLMAKLLQEVKEGQRIDCGVHDW---------------NNVIHF 639
+ +G A N LL + D + W N +I
Sbjct: 488 IWNLMHKRGVAPNEVT--YCTLLDAFFKVGTFDRAMMIWKDALSKGFTKSITLYNTMICG 545
Query: 640 FCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEMKSFASST 699
FCK + A++ +M+ LG P+ T+ +++ GY +G + ++K +
Sbjct: 546 FCKMEKLVQAQEIFLKMKELGFPPDEITYRTLIDGYCKVGNLVEAL-----KLKDMSERD 600
Query: 700 SMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFIDKYKYRTLF 747
++ E+ +S++ R + N ++A M+ ++ + Y +L
Sbjct: 601 GISSSTEMYNSLITGVFRSEELQKLNGLLAEMKNRELSPNVVTYGSLI 648
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 96/467 (20%), Positives = 179/467 (38%), Gaps = 48/467 (10%)
Query: 234 GRVDPRKKCNAPLIAMKPNTNTFNIALAGCLLFETTRKAEQLLDIMPRIGVKADSNLLII 293
GRV + CN+ L + N F KA + + M +G+ D I
Sbjct: 216 GRVPSLRSCNSLLSNLVQNGEAF--------------KALLVYEQMIALGILPDIFSYTI 261
Query: 294 MAHIYERNGRREELRKLQRHIDEAVNLSDIQFRQFYNCLLSCHLKFGDLNSASKMVLEML 353
M + Y + GR +E + ++ + ++ YN L+ ++ GD+ A K VL ++
Sbjct: 262 MVNAYCKEGRVDEAFNFVKEMERSCCEPNVVT---YNSLIDGYVSLGDVCGAKK-VLALM 317
Query: 354 QRAKEARNSLAAAMLPFNAVGVNNRTPSEQNVNCTNSVDLENSGIIENHI---LSYEDFT 410
NS +L +E+ + C +E + ++ H+ L + T
Sbjct: 318 SEKGIPENSRTYTLLIKGYCKRGQMEQAEKLIGCM----MEKNLFVDEHVYGVLIHAYCT 373
Query: 411 KDRKFVAL---EAEVKRVLQ-------------TLLGMLQKQVE-LITTEHGILQPTEKI 453
R AL +A +K L+ LG + K E L++ + L+P
Sbjct: 374 AGRVDDALRIRDAMLKVGLKMNTVICNSLINGYCKLGHVNKAAEVLVSMKDWNLKPDSYG 433
Query: 454 YIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQAHDLLDE 513
Y L+ F + + + F + E N V+ ++ +G ++ A + +
Sbjct: 434 YNTLLDGFCK--QEDFIKAFKLCDEMHNKGVNFTVVTYNTLLKNLFHVGHVEHALHIWNL 491
Query: 514 MHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQKD 573
MH GV + Y +LL A+ + + +DA S G + Y ++ +
Sbjct: 492 MHKRGVAPNEVTYCTLLDAFFKVGTFDRAMMIWKDALSKGFTKSITLYNTMICGFCKMEK 551
Query: 574 TPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKL-LQEVKEGQRIDCGVHD 632
A +F +MKE P + L+ G + L+ L L+++ E I
Sbjct: 552 LVQAQEIFLKMKELGFP-PDEITYRTLIDGYCK--VGNLVEALKLKDMSERDGISSSTEM 608
Query: 633 WNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIG 679
+N++I + +Q L M++ PN T+ S++ G+ G
Sbjct: 609 YNSLITGVFRSEELQKLNGLLAEMKNRELSPNVVTYGSLIAGWCDKG 655
>gi|414875533|tpg|DAA52664.1| TPA: hypothetical protein ZEAMMB73_493958 [Zea mays]
Length = 688
Score = 56.2 bits (134), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 94/428 (21%), Positives = 171/428 (39%), Gaps = 48/428 (11%)
Query: 329 YNCLLSCHLKFGDLNSASKMVLEMLQRAKEAR----NSLAAAMLPFNAVGVNNRTPSEQN 384
YN +++ + GDL A+++V E ++ +K+A N L +L A G + Q
Sbjct: 244 YNVVITGLTRKGDLEEAAELV-EGMRLSKKASSFTYNPLITGLL---ARGCVKKVYDLQ- 298
Query: 385 VNCTNSVDLENSGIIENHILSYEDFTKDRKFVALEAEVKRVLQTLLGMLQK-QVELITTE 443
+++EN GI+ V A + +LQ+ G+++ QV+
Sbjct: 299 ------LEMENEGIMPT-------------VVTYNAMIHGLLQS--GLVEAAQVKFAEMR 337
Query: 444 HGILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQ---VSHDDAALGHVITLCIS 500
L P Y L+ + +AG KE + L ++++ G+
Sbjct: 338 AMGLLPDVITYNSLLNGYCKAGNLKEALLLFGDLRRAGLAPTVLTYNIRIDGYC-----R 392
Query: 501 LGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASC 560
LG L++A L +EM G + Y L+K + + S G+Q D
Sbjct: 393 LGDLEEARILKEEMGEQGCLPNVCTYTILMKGSLNVCSLAMAREFFDEMLSKGLQPDCFA 452
Query: 561 YEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKG-CAQNHEAGLMAKLLQE 619
Y + ++++ D AL L + + I S + +L+ G C + ++
Sbjct: 453 YNTRICAELILGDIARALELREVLMLEGIS-SDTVTYNILIHGLCKTGNLKDAKELQMKM 511
Query: 620 VKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIG 679
V G + DC + +IH C++ L+++A K M S G LP+A TF ++ Y G
Sbjct: 512 VSNGLQPDCIT--YTCLIHAHCERGLLREARKIFNNMISDGLLPSAVTFTVIIHAYCRRG 569
Query: 680 GKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFID 739
Y+ +G + + +E + +++ R G A+ M E + +
Sbjct: 570 NLYSA----YGWFRKMLEE-GVEPNEITYNVLIHALCRMGRTQLASHHFHEMLERGLVAN 624
Query: 740 KYKYRTLF 747
KY Y L
Sbjct: 625 KYTYTLLI 632
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 88/186 (47%), Gaps = 10/186 (5%)
Query: 512 DEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRD--ARSAGIQLDASCYEALLQSKI 569
+EM G+ S Y +LL ++++ R +V LL++ R +G + Y ++
Sbjct: 193 EEMLQLGIEPSIVTYNTLLDSFLKEGRKDKVAMLLKEMETRGSGCLPNDVTYNVVITGLT 252
Query: 570 VQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKL--LQEVKEGQRID 627
+ D A L + M+ SK ++ + L+ G G + K+ LQ E + I
Sbjct: 253 RKGDLEEAAELVEGMRLSK--KASSFTYNPLITGLLAR---GCVKKVYDLQLEMENEGIM 307
Query: 628 CGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTE 687
V +N +IH + L++ A+ MR++G LP+ T++S++ GY G E
Sbjct: 308 PTVVTYNAMIHGLLQSGLVEAAQVKFAEMRAMGLLPDVITYNSLLNGYCK-AGNLKEALL 366
Query: 688 LWGEMK 693
L+G+++
Sbjct: 367 LFGDLR 372
Score = 41.6 bits (96), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 46/233 (19%), Positives = 91/233 (39%), Gaps = 38/233 (16%)
Query: 447 LQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQ 506
++P+ Y L+ +FL+ G+ ++ L + E +D VIT G L++
Sbjct: 200 IEPSIVTYNTLLDSFLKEGRKDKVAMLLKEMETRGSGCLPNDVTYNVVITGLTRKGDLEE 259
Query: 507 AHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQ 566
A +L++ M L+ +ASS Y L+ + ++V L + + GI Y A++
Sbjct: 260 AAELVEGMRLSK-KASSFTYNPLITGLLARGCVKKVYDLQLEMENEGIMPTVVTYNAMIH 318
Query: 567 SKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRI 626
+ A F EM+ GL+ ++
Sbjct: 319 GLLQSGLVEAAQVKFAEMR-----------------------AMGLLPDVIT-------- 347
Query: 627 DCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIG 679
+N++++ +CK +++A +R G P T++ + GY +G
Sbjct: 348 ------YNSLLNGYCKAGNLKEALLLFGDLRRAGLAPTVLTYNIRIDGYCRLG 394
>gi|410110139|gb|AFV61149.1| pentatricopeptide repeat-containing protein 123, partial [Lippia
salviifolia]
Length = 378
Score = 56.2 bits (134), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 53/255 (20%), Positives = 117/255 (45%), Gaps = 25/255 (9%)
Query: 447 LQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQ---VSHDDAALGHVITLCISLGW 503
++P Y L++ + +A E H +++N++ V+++ + + TL
Sbjct: 124 IEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTL-----E 178
Query: 504 LDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEA 563
++A++L+ EM G+ +S Y++++ + + + L + RS+G+++D +
Sbjct: 179 HEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEID----QI 234
Query: 564 LLQSKIVQKDTPG----ALHLFKEMKE-SKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQ 618
L Q+ IV + G A L E+K IPR ++ G + EA + + Q
Sbjct: 235 LFQTMIVAYERAGLVAHAKRLLHELKRPDNIPRDTAIH---ILAGAGRIEEATYVFR--Q 289
Query: 619 EVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAI 678
V G+ D V + +IH K + + + +MR LG+ P++ ++ Y +
Sbjct: 290 AVDAGEVKDITV--FERMIHLLSKYKKYSNVXEVFDKMRGLGYFPDSDVIAIVLNAYGKL 347
Query: 679 GGKYTEVTELWGEMK 693
++ + +++ EM+
Sbjct: 348 -QEFDKANDVYMEMQ 361
Score = 43.9 bits (102), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 49/256 (19%), Positives = 108/256 (42%), Gaps = 38/256 (14%)
Query: 506 QAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALL 565
+A + + +G Y +++ + +A RE +L+ + ++AG+ + + Y LL
Sbjct: 6 KAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMKTAGVMPNTTSYSTLL 65
Query: 566 QSKIVQKDTPGALHLFKEMKESK-------------------IPRSGHQEFEMLVK-GCA 605
+ K AL +F EM+E K + + + F + K G
Sbjct: 66 SMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIE 125
Query: 606 QN-----------HEAGLMAKLLQEVKEGQR--IDCGVHDWNNVIHFFCKKRLMQDAEKA 652
N +A L + + + QR I+ V +N+++ + K + A
Sbjct: 126 PNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNL 185
Query: 653 LKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEMKSFASSTSMNFDEELLDSVL 712
++ M+S G PN+ T+ ++++ + + GK L+ +++ S+ + D+ L +++
Sbjct: 186 IQEMQSRGIEPNSITYSTIISIWGKV-GKLDRAAMLFQKLR----SSGVEIDQILFQTMI 240
Query: 713 YTFVRGGFFARANEVV 728
+ R G A A ++
Sbjct: 241 VAYERAGLVAHAKRLL 256
>gi|218199303|gb|EEC81730.1| hypothetical protein OsI_25362 [Oryza sativa Indica Group]
Length = 583
Score = 56.2 bits (134), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 76/362 (20%), Positives = 151/362 (41%), Gaps = 30/362 (8%)
Query: 248 AMKPNTNTFNIALAGCLLFETTRKAEQLLDIMPRIGVKAD--SNLLIIMAHIYERNGRRE 305
A+ P T+N + C +KA +L M GV D ++ +++ A +NG +
Sbjct: 76 AIPPTRTTYNNVINACGAAGNWKKALELCKKMTENGVGPDLVTHNIVLSAL---KNGAQY 132
Query: 306 ELRKLQRHIDEAVNLSDIQFRQFYNCLLSCHLKFGDLNSASKMVLEMLQRAKEARNSLAA 365
I + N++ F N ++ C +K G A +E+ +E R
Sbjct: 133 SKAISYFEIMKGANVTSDTFT--LNIIIHCLVKIGQCGEA----IELFNSMRERRTKCPP 186
Query: 366 AMLPFNAVGVNNRTPSEQNVNCTNSVDLENSGIIENHILSYEDFTKDRKFVALEAEVKRV 425
++ + ++ +++ Q NC DL + ++ +I++Y L A R
Sbjct: 187 DVVTYTSI-MHSYCIYGQVENCKAIFDLMVAEGVKPNIVAYNSL--------LGAYASR- 236
Query: 426 LQTLLGMLQKQVELIT-TEHGILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQV 484
GM ++ + + + L+P Y L+ A+ + + ++ K +K + +
Sbjct: 237 -----GMHREALAIFNLIKKNGLRPDIVSYTSLLNAYGRSAQPEKAREVFNKMKKNSCK- 290
Query: 485 SHDDAALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTA 544
+ + +I S G L +A LL EM G++ ++LL A + +
Sbjct: 291 -PNKVSYNALIDAYGSAGMLKEAVGLLHEMEKDGIQPDVVSISTLLAACGRCRQITRIET 349
Query: 545 LLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGC 604
+L ARS GI L+ Y + ++S + D AL L+ M+ES + + + +L+ G
Sbjct: 350 ILEAARSRGIDLNTVAYNSGIKSYLSFGDYEKALELYTSMRESNV-KPDAVTYNILISGS 408
Query: 605 AQ 606
++
Sbjct: 409 SK 410
>gi|115435438|ref|NP_001042477.1| Os01g0228400 [Oryza sativa Japonica Group]
gi|17385740|dbj|BAB78680.1| putative leaf protein [Oryza sativa Japonica Group]
gi|113532008|dbj|BAF04391.1| Os01g0228400 [Oryza sativa Japonica Group]
gi|215740499|dbj|BAG97155.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 636
Score = 56.2 bits (134), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 89/200 (44%), Gaps = 10/200 (5%)
Query: 443 EHGILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLG 502
+ G+L P ++ L+K FL+A + L E + D H + S+G
Sbjct: 324 DSGVL-PNVIVFNTLLKGFLDANDMAAVDDVL--GLMEQFGIKPDIVTYSHQLNALSSMG 380
Query: 503 WLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYE 562
+ + + D+M AG+ VY+ L K Y+ A +P + LLR G++ + +
Sbjct: 381 HMAKCMKVFDKMIEAGIEPDPQVYSILAKGYVRAQQPEKAEELLRQMGRLGVRPNVVTFT 440
Query: 563 ALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCA---QNHEAGLMAKLLQE 619
++ D A+ ++ M+++ + R + FE L+ G + Q +A + +++Q+
Sbjct: 441 TVISGWCSVADMGNAVRVYAAMRDAGV-RPNLRTFETLIWGYSELKQPWKAEEVLQMMQD 499
Query: 620 --VKEGQRIDCGVHD-WNNV 636
V+ Q C V D W V
Sbjct: 500 AGVRPKQTTYCLVADAWKAV 519
Score = 53.1 bits (126), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 55/232 (23%), Positives = 104/232 (44%), Gaps = 7/232 (3%)
Query: 449 PTEKIYIKLVKAFLEAGKTKELTHFLIK-AEKENLQVSHDDAALGHVITLCISLGWLDQA 507
P Y L A+ + +T +++ A++ L+ S + G ++ G L +A
Sbjct: 258 PDVVTYNTLASAYAKNDETWRAEELVVEMAQQAGLRTS--ERTWGIIVGGYCREGRLGEA 315
Query: 508 HDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQS 567
+ +M +GV + V+ +LLK +++AN V +L GI+ D Y L +
Sbjct: 316 LRCVRQMKDSGVLPNVIVFNTLLKGFLDANDMAAVDDVLGLMEQFGIKPDIVTYSHQLNA 375
Query: 568 KIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEV-KEGQRI 626
+ +F +M E+ I Q + +L KG + + +LL+++ + G R
Sbjct: 376 LSSMGHMAKCMKVFDKMIEAGI-EPDPQVYSILAKGYVRAQQPEKAEELLRQMGRLGVRP 434
Query: 627 DCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAI 678
+ V + VI +C M +A + MR G PN +TF +++ GY+ +
Sbjct: 435 N--VVTFTTVISGWCSVADMGNAVRVYAAMRDAGVRPNLRTFETLIWGYSEL 484
Score = 46.2 bits (108), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 49/255 (19%), Positives = 107/255 (41%), Gaps = 10/255 (3%)
Query: 448 QPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQA 507
+P+ Y L+ A L + + + +L+ AE E+ + D +I + + +A
Sbjct: 111 RPSLVTYTTLLAA-LTSQRAFDTIPWLL-AEVEDAGLRPDSIFFNALINALVEARRMGEA 168
Query: 508 HDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALL------RDARSAGIQLDASCY 561
+ M +G R ++S + +L+K Y A RP E + A ++ + + Y
Sbjct: 169 TNTFLRMGHSGCRPTASTFNTLIKGYGIAGRPEESQRVFDMMASGGAGGEAAVRPNLTTY 228
Query: 562 EALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVK 621
L+++ A + M+ S + L A+N E +L+ E+
Sbjct: 229 NILVKAWCDAGRLEEAWRVVARMRASGAD-PDVVTYNTLASAYAKNDETWRAEELVVEMA 287
Query: 622 EGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGK 681
+ + W ++ +C++ + +A + +++M+ G LPN F++++ G+
Sbjct: 288 QQAGLRTSERTWGIIVGGYCREGRLGEALRCVRQMKDSGVLPNVIVFNTLLKGFLD-AND 346
Query: 682 YTEVTELWGEMKSFA 696
V ++ G M+ F
Sbjct: 347 MAAVDDVLGLMEQFG 361
>gi|297804554|ref|XP_002870161.1| hypothetical protein ARALYDRAFT_915114 [Arabidopsis lyrata subsp.
lyrata]
gi|297315997|gb|EFH46420.1| hypothetical protein ARALYDRAFT_915114 [Arabidopsis lyrata subsp.
lyrata]
Length = 702
Score = 56.2 bits (134), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 53/241 (21%), Positives = 103/241 (42%), Gaps = 7/241 (2%)
Query: 448 QPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQA 507
+P ++ A+ AG + +A E ++ D +I + G D
Sbjct: 242 EPDNVTLAAMIDAYGRAGNVEMALSLYDRARTEKWRI--DAVTFSTLIRIYGVSGNYDGC 299
Query: 508 HDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQS 567
++ +EM GV+ + +Y LL + A RP + + +D S G + S Y AL+++
Sbjct: 300 LNIYEEMKALGVKPNLVIYNRLLDSMGRAKRPWQAKIIHKDLISNGFTPNWSTYAALIRA 359
Query: 568 KIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRID 627
+ AL +++EMKE + + + L+ CA ++ Q++K + D
Sbjct: 360 YGRARYGDDALVIYREMKEKGLSLTVIL-YNTLLSMCADIGYVDEAFEIFQDMKNCETCD 418
Query: 628 CGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTE 687
++++I + + +AE AL +MR G P S++ Y GK +V +
Sbjct: 419 PDSWTFSSLITVYSCSGRVSEAEAALLQMREAGFEPTLFVLTSVIQCY----GKAKQVDD 474
Query: 688 L 688
+
Sbjct: 475 V 475
>gi|222639781|gb|EEE67913.1| hypothetical protein OsJ_25766 [Oryza sativa Japonica Group]
Length = 625
Score = 56.2 bits (134), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 57/251 (22%), Positives = 102/251 (40%), Gaps = 8/251 (3%)
Query: 443 EHGILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLG 502
HG+ +P Y L+ + GK+ E K + D G ++ + G
Sbjct: 306 RHGV-EPDVVTYTALMDYLCKNGKSTEARKIFDSLVKRGHK--PDSTTYGTLLHGYATEG 362
Query: 503 WLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYE 562
L + HDLLD M G++ ++ ++ AY + N+ E + + R G+ D Y
Sbjct: 363 ALVEMHDLLDLMMKKGMQLGHHIFNMIMGAYAKHNKVDEALLVFSNMRQQGLNPDIVNYG 422
Query: 563 ALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKG-CAQNHEAGLMAKLLQEVK 621
+L AL F +K + + F L+ G C + + + +
Sbjct: 423 TVLDILCTAGRVDDALSQFNSLKSEGLAPN-IVVFTTLIHGLCTCDKWDKVEELAFEMID 481
Query: 622 EGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGK 681
G +D +N ++ CKK + +A+ M +G PN T+++++ GY + GK
Sbjct: 482 RGICLDTIF--FNAIMGNLCKKGRVIEAKNLFDLMVRIGIEPNTNTYNTLIDGY-CLDGK 538
Query: 682 YTEVTELWGEM 692
E +L G M
Sbjct: 539 MDEAMKLLGVM 549
Score = 47.4 bits (111), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 53/281 (18%), Positives = 106/281 (37%), Gaps = 40/281 (14%)
Query: 504 LDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEA 563
+D+A + M GV +Y SL+ Y + +P+E + + G++ D Y A
Sbjct: 259 MDKATQVFTRMVKNGVMPDCIMYTSLVHGYCSSGKPKEAIGIFKKMCRHGVEPDVVTYTA 318
Query: 564 LLQ---------------SKIVQKD----------------TPGAL---HLFKEMKESKI 589
L+ +V++ T GAL H ++ K
Sbjct: 319 LMDYLCKNGKSTEARKIFDSLVKRGHKPDSTTYGTLLHGYATEGALVEMHDLLDLMMKKG 378
Query: 590 PRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDA 649
+ GH F M++ A++++ + +++ Q ++ + ++ V+ C + DA
Sbjct: 379 MQLGHHIFNMIMGAYAKHNKVDEALLVFSNMRQ-QGLNPDIVNYGTVLDILCTAGRVDDA 437
Query: 650 EKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEMKSFASSTSMNFDEELLD 709
++S G PN F +++ G K+ +V EL EM + D +
Sbjct: 438 LSQFNSLKSEGLAPNIVVFTTLIHGLCTC-DKWDKVEELAFEM----IDRGICLDTIFFN 492
Query: 710 SVLYTFVRGGFFARANEVVAMMEEGKMFIDKYKYRTLFLKY 750
+++ + G A + +M + + Y TL Y
Sbjct: 493 AIMGNLCKKGRVIEAKNLFDLMVRIGIEPNTNTYNTLIDGY 533
Score = 42.0 bits (97), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 53/109 (48%), Gaps = 5/109 (4%)
Query: 247 IAMKPNTNTFNIALAGCLLFETTRKAEQLLDIMPRIGVKADSNLLIIMAHIYERNGRREE 306
I ++PNTNT+N + G L +A +LL +M GVK + + Y +NGR E+
Sbjct: 517 IGIEPNTNTYNTLIDGYCLDGKMDEAMKLLGVMVFNGVKPSDVTYNTIINGYSQNGRIED 576
Query: 307 LRKLQRHID-EAVNLSDIQFRQFYNCLLSCHLKFGDLNSASKMVLEMLQ 354
L R +D + VN + Y LL + G +A ++ L M++
Sbjct: 577 GLTLLREMDGKGVNPGIVT----YEMLLQGLFQAGRTVAAKELYLRMIK 621
>gi|225435038|ref|XP_002281336.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59900 [Vitis vinifera]
Length = 900
Score = 56.2 bits (134), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 62/284 (21%), Positives = 118/284 (41%), Gaps = 10/284 (3%)
Query: 415 FVALEAEVKRVLQTLL--GMLQKQVELI--TTEHGILQPTEKIYIKLVKAFLEAGKTKEL 470
FV EA V ++ L G + +L+ + G+ P+ +Y L+ + + GK E
Sbjct: 316 FVPSEAAVSNLVDGLRKKGNIGSAFDLVNKVKKFGV-APSLFVYNALINSMCKDGKLDEA 374
Query: 471 THFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLL 530
+ L +D +I G LD A L +M G++A+ Y+SL+
Sbjct: 375 ESLFNNMGHKGL--FPNDVTYSILIDSFCKRGKLDVALHFLGKMTEVGIKATVYPYSSLI 432
Query: 531 KAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIP 590
+ + + R +L + + G++ + Y +L+ + + A L+ EM I
Sbjct: 433 SGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISGYCKEGELHNAFRLYHEMTGKGIS 492
Query: 591 RSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAE 650
+ + F L+ G + KL E+ E I V +N +I CK+ A
Sbjct: 493 PNTYT-FTALISGLCHANRMAEANKLFGEMVEWNVIPNEV-TYNVLIEGHCKEGNTVRAF 550
Query: 651 KALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEMKS 694
+ L M G +P+ T+ +++G + G+ +E E +++
Sbjct: 551 ELLDEMVEKGLVPDTYTYRPLISGLCST-GRVSEAREFMNDLQG 593
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 63/308 (20%), Positives = 125/308 (40%), Gaps = 18/308 (5%)
Query: 449 PTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQAH 508
P E Y L++ + G T L + ++ L D +I+ S G + +A
Sbjct: 528 PNEVTYNVLIEGHCKEGNTVRAFELLDEMVEKGL--VPDTYTYRPLISGLCSTGRVSEAR 585
Query: 509 DLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSK 568
+ ++++ + + +++LL Y + R + R+ G+ +D CY L+
Sbjct: 586 EFMNDLQGEQQKLNEMCFSALLHGYCKEGRLDDALDACREMLGRGVAMDLVCYSVLIYGI 645
Query: 569 IVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAG--LMAKLLQEVKEGQRI 626
+ Q+D + L K+M + + R + + ++ N +AG MA L ++ +
Sbjct: 646 LRQQDRRSIIDLLKQMHDQGL-RPDNVLYTTMIDA---NAKAGNLKMAFGLWDIMVSEGC 701
Query: 627 DCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVT 686
V + +I+ CK LM AE + M + LPN T+ + Y G +
Sbjct: 702 LPNVVTYTALINGLCKIGLMDKAELLCREMLASNSLPNQNTYACFLD-YLTSEGNIEKAI 760
Query: 687 ELWGEMKS--FASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFIDKYKYR 744
+L + A++ + N ++ F + G A EV+ M + + D Y
Sbjct: 761 QLHDVLLEGFLANTVTYNI-------LIRGFCKLGRIQEAAEVLVNMIDSGISPDCISYS 813
Query: 745 TLFLKYHK 752
T+ +Y +
Sbjct: 814 TIIYEYCR 821
>gi|297741630|emb|CBI32762.3| unnamed protein product [Vitis vinifera]
Length = 648
Score = 56.2 bits (134), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 55/246 (22%), Positives = 101/246 (41%), Gaps = 11/246 (4%)
Query: 509 DLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSK 568
++L M GV + Y L+ + + E L + R GI+ D Y +++
Sbjct: 285 EILTLMEKEGVACNVVTYTLLIHGFSNIGKIEEAQRLFEEMREKGIEADVYVYTSIISCN 344
Query: 569 IVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLM--AKLLQEVKEGQRI 626
+ AL LF EM + + S H + L+ G + AG M A++L +G+ I
Sbjct: 345 CRSGNVKRALVLFDEMTDKGLIPSAHT-YGALIHGVCK---AGQMEAAQMLVNEMQGKGI 400
Query: 627 DCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVT 686
D +N +I +C+ ++ +A + M G + ++S+ +G + K
Sbjct: 401 DLNPVIFNTLIDGYCESGMVDEALRLQVVMEKKGLESDVFAYNSIASGLCKLNRKDEAKG 460
Query: 687 ELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFIDKYKYRTL 746
L+ ++ S +M+F +++ + + G F A V MEE + Y L
Sbjct: 461 LLFSMVERGVSPNTMSF-----TTLIDIYCKEGNFVEAKRVFREMEEKGNVPNIITYNVL 515
Query: 747 FLKYHK 752
Y K
Sbjct: 516 IDGYSK 521
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 56/250 (22%), Positives = 101/250 (40%), Gaps = 21/250 (8%)
Query: 500 SLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDAS 559
++G +++A L +EM G+ A VY S++ + + L + G+ A
Sbjct: 311 NIGKIEEAQRLFEEMREKGIEADVYVYTSIISCNCRSGNVKRALVLFDEMTDKGLIPSAH 370
Query: 560 CYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLM--AKLL 617
Y AL+ A L EM+ I + F L+ G E+G++ A L
Sbjct: 371 TYGALIHGVCKAGQMEAAQMLVNEMQGKGIDLN-PVIFNTLIDGYC---ESGMVDEALRL 426
Query: 618 QEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAA 677
Q V E + ++ V +N++ CK +A+ L M G PN +F +++ Y
Sbjct: 427 QVVMEKKGLESDVFAYNSIASGLCKLNRKDEAKGLLFSMVERGVSPNTMSFTTLIDIYCK 486
Query: 678 IGGKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMF 737
G + E ++ EM+ + ++ + Y + G+ R N M+E
Sbjct: 487 -EGNFVEAKRVFREMEEKGNVPNI---------ITYNVLIDGYSKRGN-----MKEAHKL 531
Query: 738 IDKYKYRTLF 747
D+ + R L
Sbjct: 532 KDELENRGLI 541
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 65/294 (22%), Positives = 123/294 (41%), Gaps = 18/294 (6%)
Query: 442 TEHGILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISL 501
T+ G++ P+ Y L+ +AG+ E L+ E + + + +I
Sbjct: 361 TDKGLI-PSAHTYGALIHGVCKAGQM-EAAQMLVN-EMQGKGIDLNPVIFNTLIDGYCES 417
Query: 502 GWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCY 561
G +D+A L M G+ + Y S+ + NR E LL G+ + +
Sbjct: 418 GMVDEALRLQVVMEKKGLESDVFAYNSIASGLCKLNRKDEAKGLLFSMVERGVSPNTMSF 477
Query: 562 EALLQSKIVQKDTPGALHLFKEMKE-SKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEV 620
L+ + + A +F+EM+E +P + +L+ G ++ KL E+
Sbjct: 478 TTLIDIYCKEGNFVEAKRVFREMEEKGNVPNI--ITYNVLIDGYSKRGNMKEAHKLKDEL 535
Query: 621 KEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGG 680
E + + V+ ++IH C + A K M G +PN T+ +M++G + G
Sbjct: 536 -ENRGLIPDVYTCTSLIHGECIDGKVDMALKLFDEMPQRGLVPNVVTYTAMISGLSK-DG 593
Query: 681 KYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEG 734
+ E +L+ EMK T + D+ + S++ G A+E ++M +G
Sbjct: 594 RSEEAFKLYDEMK----ETGLTPDDTVYSSLV------GSLHSADESISMQIQG 637
>gi|357120446|ref|XP_003561938.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g16880-like [Brachypodium distachyon]
Length = 787
Score = 56.2 bits (134), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 106/506 (20%), Positives = 191/506 (37%), Gaps = 45/506 (8%)
Query: 249 MKPNTNTFNIALAGCLLFETTRKAEQLLDIMPRIGVKADSNLLIIMAHIYERNGRREELR 308
+ PN TFN+ + T A L M G+ D+ + + + R G E R
Sbjct: 200 LHPNHYTFNLLVHTHCSKGTLADALSTLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEAR 259
Query: 309 K-LQRHIDEAVNLSDIQFRQFYNCLLSCHLKFGDLNSASKMVLEMLQRAKEAR----NSL 363
L R + V + R YN L+S + + G + A+K+V M E N L
Sbjct: 260 ALLARMKKDGVAPT----RPTYNTLVSAYARLGWIKQATKVVEAMTANGFEPDLWTYNVL 315
Query: 364 AAAMLPFNAVGVNNRTPSEQNVNCTNSVDLENSGIIENHILSYEDFTKDRKFVALEAEVK 423
AA + V R E +E G + +++Y ++
Sbjct: 316 AAGLCQAGKVDEAFRLKDE----------MERLGTLLPDVVTYNTLADACFKCRCSSDAL 365
Query: 424 RVLQTLLGMLQKQVELITTEHGILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQ 483
R+L+ M +K V+ H I ++K + G+ + L K + L
Sbjct: 366 RLLEE---MREKGVKATLVTHNI----------VIKGLCKDGELEGALGCLNKMADDGL- 411
Query: 484 VSHDDAALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVT 543
+ D +I G + +A+ L+DEM G++ + ++L + R E
Sbjct: 412 -APDVITYNTLIHAHCKAGNIAKAYTLMDEMVRRGLKLDTFTLNTVLYNLCKEKRYEEAQ 470
Query: 544 ALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKG 603
LL+ G D Y ++ + + ++ AL L+ EM E K+ S + L+KG
Sbjct: 471 GLLQSPPQRGFMPDEVSYGTVMAAYFKEYNSEPALRLWDEMIEKKLTPS-ISTYNTLIKG 529
Query: 604 CAQNHEAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLP 663
++ L E+ E + +N +IH +CK+ +++A + +M P
Sbjct: 530 LSRMGRLKEAIDKLNELMEKGLVPDDT-TYNIIIHAYCKEGDLENAFQFHNKMVENSFKP 588
Query: 664 NAQTFHSMVTGYAAIG--GKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFF 721
+ T ++++ G G K ++ E W E + N +++ T + G
Sbjct: 589 DVVTCNTLMNGLCLNGKLDKALKLFESWVEKGKKVDVITYN-------TLIQTMCKDGDV 641
Query: 722 ARANEVVAMMEEGKMFIDKYKYRTLF 747
A A ME + D + Y +
Sbjct: 642 DTALHFFADMEARGLQPDAFTYNVVL 667
Score = 43.9 bits (102), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 45/193 (23%), Positives = 80/193 (41%), Gaps = 13/193 (6%)
Query: 493 HVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARS- 551
H+ L +S LD L HL G S+ + + L AY P LL R
Sbjct: 103 HLFPLLLSFVPLDPLRSL--HRHLLGNLPSTPLADAALSAYSRLRLPHLAAQLLHSLRRR 160
Query: 552 ----AGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKG-CAQ 606
+Q + AL +S +L F+ + ++ H F +LV C++
Sbjct: 161 VRVRPSLQAANAVLSALARSPSTSPQ--ASLDAFRSIVALRL-HPNHYTFNLLVHTHCSK 217
Query: 607 NHEAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQ 666
A ++ L +G + +N +++ C+K ++ +A L RM+ G P
Sbjct: 218 GTLADALSTL--STMQGFGLSPDAVTYNTLLNAHCRKGMLGEARALLARMKKDGVAPTRP 275
Query: 667 TFHSMVTGYAAIG 679
T++++V+ YA +G
Sbjct: 276 TYNTLVSAYARLG 288
Score = 40.8 bits (94), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 39/171 (22%), Positives = 72/171 (42%), Gaps = 4/171 (2%)
Query: 510 LLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKI 569
L DEM + S S Y +L+K R +E L + G+ D + Y ++ +
Sbjct: 507 LWDEMIEKKLTPSISTYNTLIKGLSRMGRLKEAIDKLNELMEKGLVPDDTTYNIIIHAYC 566
Query: 570 VQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQE-VKEGQRIDC 628
+ D A +M E+ + L+ G N + KL + V++G+++D
Sbjct: 567 KEGDLENAFQFHNKMVENSF-KPDVVTCNTLMNGLCLNGKLDKALKLFESWVEKGKKVD- 624
Query: 629 GVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIG 679
V +N +I CK + A M + G P+A T++ +++ + G
Sbjct: 625 -VITYNTLIQTMCKDGDVDTALHFFADMEARGLQPDAFTYNVVLSALSEAG 674
>gi|302771417|ref|XP_002969127.1| hypothetical protein SELMODRAFT_61162 [Selaginella moellendorffii]
gi|300163632|gb|EFJ30243.1| hypothetical protein SELMODRAFT_61162 [Selaginella moellendorffii]
Length = 646
Score = 56.2 bits (134), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 99/520 (19%), Positives = 210/520 (40%), Gaps = 50/520 (9%)
Query: 247 IAMKPNTNTFNIALAGCLLFETTRKAEQLLDIMPRIGVKADSNLLIIMAHIYERNGRREE 306
+ + P+ T+N + C+ ++A +L M G + + +Y + G +E
Sbjct: 139 LEISPDDYTYNTMITACIQNSHCQEALRLFQEMKEAGCCPNRVTYNALLDVYGKGGMHKE 198
Query: 307 LRKLQRHIDEAVNLSDIQFRQFYNCLLSCHLKFGDLNSASKMVLEMLQRAKEARNSLAAA 366
+L ++ A +I YN L++ + + G + A+ + ++ L+
Sbjct: 199 ASELLVEMEAAGISPNIVT---YNELIAAYARAGLCDEAAAL----------KKSLLSKG 245
Query: 367 MLPFNAVGVNNRTPSEQNVNCTNSVDLENSGIIENHILSYEDFTKDRKFVALEAEVK-RV 425
+ P ++ CT + E + + E FT+ RK V +
Sbjct: 246 LCP------------DEFTYCTLISAFNRA---ERYEKALETFTEMRKTNCTPNIVTYNI 290
Query: 426 LQTLLGMLQKQVELITT----EHGILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKEN 481
L + G ++K +++ + P + L+K+F G E+++ + ++
Sbjct: 291 LIDIYGRMEKLDDMMKVFKFMQEKNCTPDLVTWNSLLKSFGNCGMLTEVSNVFREMKRAG 350
Query: 482 LQVSHDDAALGHVITLCIS-LGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPR 540
D +++ C G++D + D+ + G++ + +A+L+ + R +
Sbjct: 351 YMPGVDTF---NILIECYGRCGYVDYSVDIYKGLLRTGLQPTVPTFAALMASLAREGRWQ 407
Query: 541 EVTALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEM-KESKIPRSG--HQEF 597
+ + ++ AG+QL +C+ L+ S E+ K +K P SG + F
Sbjct: 408 QCEKVSQEMAEAGLQLSDACHAGLIHSYANSGQFFQLRKYIDELEKSAKQPLSGILCKTF 467
Query: 598 EMLVKGCAQNHEAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMR 657
+ C ++EA L L Q G D V +N +I K+ ++ A K L+ +R
Sbjct: 468 VLAYCKCCMDNEAQL--ALNQLYDNGHSPDIKV--FNAMISMCAKRGWIERAVKLLEEIR 523
Query: 658 SLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVR 717
P+ T++ +++ Y G Y + E+ EM+ + ++ +++LY++ +
Sbjct: 524 KAQLKPDGVTYNCLMSMYGR-EGMYHKAEEVMSEMRRAGKAPNLI----TYNTLLYSYTK 578
Query: 718 GGFFARANEVVAMMEEGKMFIDKYKYRTLFLKYHK-TLYK 756
G A V M ++ D + + TL Y LYK
Sbjct: 579 HGRMDDAARVFGDMVAARVRPDNFTFNTLVGSYSSLGLYK 618
Score = 47.8 bits (112), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 69/155 (44%), Gaps = 3/155 (1%)
Query: 526 YASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALH-LFKEM 584
Y SL+ A R E L + G + +A Y +L + D+ + LF+EM
Sbjct: 77 YTSLISILSRARRFDEGITLFETMQREGQRGNAVTYNVMLDLYGKRGDSWDRIQSLFQEM 136
Query: 585 KESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKR 644
K+ +I + + ++ C QN +L QE+KE V +N ++ + K
Sbjct: 137 KDLEISPDDYT-YNTMITACIQNSHCQEALRLFQEMKEAGCCPNRV-TYNALLDVYGKGG 194
Query: 645 LMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIG 679
+ ++A + L M + G PN T++ ++ YA G
Sbjct: 195 MHKEASELLVEMEAAGISPNIVTYNELIAAYARAG 229
>gi|388851710|emb|CCF54706.1| uncharacterized protein [Ustilago hordei]
Length = 1372
Score = 56.2 bits (134), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 64/259 (24%), Positives = 113/259 (43%), Gaps = 24/259 (9%)
Query: 452 KIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQAHDLL 511
K Y +L++A AG H+L +A + ++ D L ++ + + +D A +
Sbjct: 646 KAYRQLIQACNRAGDIDLAEHYLTQALERGIRPRTSDFNL--LVDMHVRRTNVDAALAIF 703
Query: 512 DEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQ 571
DEM GV+ Y L+ + P LR +AG+ D Y ALL +
Sbjct: 704 DEMKEFGVQPDKYTYTILINGFALRRDPESAAHALRAMIAAGVTPDRITYAALLNCYVES 763
Query: 572 KDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKL-LQEVKE--GQRIDC 628
A+ LF MK + R ++ C +A +++ + +Q+V E G+ +
Sbjct: 764 GLYDAAIRLFAWMKSHRDVR-----LRPTIEICNIILKAYVLSSMPVQKVMELVGKVREM 818
Query: 629 GVHDWNN----VIHFFCKKRLMQ-------DAEKALKRMRSLGHLPNAQTFH--SMVTGY 675
G++ N ++ C LM +AE+AL + +G+ A +H M+ GY
Sbjct: 819 GLNPNTNTYALMLQSACDAGLMHLAEEIFTEAERALPSLTGVGYEQGANLYHFTIMIHGY 878
Query: 676 AAIGGKYTEVTELWGEMKS 694
+ G++TE E + EM+S
Sbjct: 879 LRL-GEHTEAKEYFDEMQS 896
>gi|255661176|gb|ACU25757.1| pentatricopeptide repeat-containing protein [Mulguraea
asparagoides]
Length = 426
Score = 56.2 bits (134), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 50/252 (19%), Positives = 121/252 (48%), Gaps = 19/252 (7%)
Query: 447 LQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQ---VSHDDAALGHVITLCISLGW 503
++P Y L++ + +A E H +++N++ V+++ + + TL
Sbjct: 180 IEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTL-----E 234
Query: 504 LDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEA 563
++A++L+ EM G+ +S Y++++ + + + L + RS+G+++D +
Sbjct: 235 HEKANNLIQEMQHRGIEPNSITYSTIISIWGKVGKLDRAAVLFQKLRSSGVEID----QV 290
Query: 564 LLQSKIVQKDTPGAL-HLFKEMKESKIPRSGHQEFEM-LVKGCAQNHEAGLMAKLLQEVK 621
L Q+ IV + G + H + + E K P + ++ + ++ G + EA + + Q +
Sbjct: 291 LYQTMIVAYERAGLVAHAKRLLHELKRPDNIPRDIAIHILAGAGRIEEATWVFR--QAID 348
Query: 622 EGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGK 681
G+ D V + +IH F K + + + +MR LG+ P++ ++ Y + +
Sbjct: 349 AGEVKDITV--FERMIHLFSKYKKYGNVVEVFDKMRGLGYFPDSNVIALVLNAYGKL-HE 405
Query: 682 YTEVTELWGEMK 693
+ + +++ EM+
Sbjct: 406 FDKANDVYMEMQ 417
Score = 48.5 bits (114), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 63/315 (20%), Positives = 128/315 (40%), Gaps = 40/315 (12%)
Query: 447 LQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQ 506
L P Y L+ F + G +L K E++ +V D ++I L L +
Sbjct: 5 LSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQD--RVPGDLVLYSNLIELSRKLCDYSK 62
Query: 507 AHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQ 566
A + + +G Y +++ + A RE +L+ + R+AG+ + + Y LL
Sbjct: 63 AISIFSRLKRSGFMPDLVAYNAMINVFGXAKLFREARSLISEMRTAGVMPNTASYSTLLT 122
Query: 567 SKIVQKDTPGALHLFKEMKESK-------------------IPRSGHQEFEMLVK-GCAQ 606
+ K AL +F EM+E K + + + F + K G
Sbjct: 123 MYVENKKFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEP 182
Query: 607 N-----------HEAGLMAKLLQEVKEGQR--IDCGVHDWNNVIHFFCKKRLMQDAEKAL 653
N +A L + + + QR I+ V +N+++ + K + A +
Sbjct: 183 NVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLI 242
Query: 654 KRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEMKSFASSTSMNFDEELLDSVLY 713
+ M+ G PN+ T+ ++++ + + GK L+ +++ S+ + D+ L +++
Sbjct: 243 QEMQHRGIEPNSITYSTIISIWGKV-GKLDRAAVLFQKLR----SSGVEIDQVLYQTMIV 297
Query: 714 TFVRGGFFARANEVV 728
+ R G A A ++
Sbjct: 298 AYERAGLVAHAKRLL 312
>gi|357145546|ref|XP_003573680.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Brachypodium distachyon]
Length = 739
Score = 56.2 bits (134), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 53/232 (22%), Positives = 83/232 (35%), Gaps = 41/232 (17%)
Query: 449 PTEKIYIKLVKAFLEAGKTKELTH-FLIKAEKENLQVSHDDAALGHVITLCISLGWLDQA 507
P Y V + AG F++ + ++ + AL H LC G + +A
Sbjct: 105 PDSHAYTSFVVGYCRAGLLAHACRLFVLMPLRGCVRTAFTYTALLH--GLC-GAGMVREA 161
Query: 508 HDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQS 567
+ M G VYA+++ A R RE LL DA + G + + Y AL+
Sbjct: 162 MSVFAGMQADGCAPDPHVYATMVHGLCGAGRTREAETLLSDAMAEGFEPNVVVYNALIDG 221
Query: 568 KIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRID 627
D A+ +F+ M V GC+ N
Sbjct: 222 YCNVGDLELAVDVFERMD---------------VNGCSPN-------------------- 246
Query: 628 CGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIG 679
V + +I FCK R + A RM G +PN T+ +++ G + G
Sbjct: 247 --VRTYTELISGFCKSRKLDRAMMLFSRMVDAGLVPNVVTYTALIQGQCSDG 296
Score = 55.8 bits (133), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 80/177 (45%), Gaps = 8/177 (4%)
Query: 506 QAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALL 565
+A LL + G++ + VY SL+ +A R L++ S G DA Y +L+
Sbjct: 335 EAQLLLGSLIQKGIKVNEIVYTSLIDGLCKAGRFAAADRLMQTLVSQGFVPDAHTYSSLI 394
Query: 566 QSKIVQKDTPGALHLFKEMKESKI---PRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKE 622
QK+ A+ + +M E + P + + LV+ + ++ K+ +
Sbjct: 395 DGLCRQKELSEAMLVLDDMMEKGVQPSPVTYTIIIDELVREVGADGSKKILDKM---IAA 451
Query: 623 GQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIG 679
G + D V + + +C + M+DAE + M G PN T+++++ GYA +G
Sbjct: 452 GIKPD--VFTYTIFVRSYCHEGRMEDAEHMMLHMVDHGVCPNLVTYNALICGYANLG 506
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/227 (20%), Positives = 96/227 (42%), Gaps = 6/227 (2%)
Query: 449 PTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQAH 508
P +Y +V AG+T+E L A E + + +I ++G L+ A
Sbjct: 175 PDPHVYATMVHGLCGAGRTREAETLLSDAMAEGFE--PNVVVYNALIDGYCNVGDLELAV 232
Query: 509 DLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSK 568
D+ + M + G + Y L+ + ++ + L AG+ + Y AL+Q +
Sbjct: 233 DVFERMDVNGCSPNVRTYTELISGFCKSRKLDRAMMLFSRMVDAGLVPNVVTYTALIQGQ 292
Query: 569 IVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQE-VKEGQRID 627
A L + M+ S + +L+ ++ G LL +++G +++
Sbjct: 293 CSDGQLDCAYRLLQSMENSGLV-PNEWTCSVLIDALCKHERVGEAQLLLGSLIQKGIKVN 351
Query: 628 CGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTG 674
V + ++I CK A++ ++ + S G +P+A T+ S++ G
Sbjct: 352 EIV--YTSLIDGLCKAGRFAAADRLMQTLVSQGFVPDAHTYSSLIDG 396
>gi|356571194|ref|XP_003553764.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g04760, chloroplastic-like [Glycine max]
Length = 531
Score = 56.2 bits (134), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 56/286 (19%), Positives = 116/286 (40%), Gaps = 11/286 (3%)
Query: 447 LQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQ 506
PT Y L++A L G E L + + NLQ D +I +C G++D+
Sbjct: 155 FNPTVVTYTILIEATLLQGGIDEAIKLLDEMFEINLQ--PDVFPYNSIIXMCRE-GYVDR 211
Query: 507 AHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQ 566
A +++ + G Y LL++ + L+ D + G + + Y L+
Sbjct: 212 AFEVISSISSKGYALDVITYNILLRSLXNQGKWEAGFELMSDMVAKGCEANVVTYSVLIS 271
Query: 567 SKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRI 626
S + L K+MK+ + G+ ++ C + + L + +G
Sbjct: 272 SLCRDGKVEEGVGLLKDMKKKGLEPDGYCYDPLIAVLCKEGRVDLAIEVLDVMISDGCVP 331
Query: 627 DCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVT 686
D + ++N ++ CK++ +A +++ +G PNA +++++ + + G K +
Sbjct: 332 D--IVNYNTILACLCKQKRADEALSIFEKLGEVGCSPNASSYNTVFSALGSSGHKVRALG 389
Query: 687 ELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMME 732
+ EM + + +S++ R G A E++ ME
Sbjct: 390 MIL-EMLDXVDPDVIAY-----NSLISCLCRDGMVDEAIELLVDME 429
Score = 43.1 bits (100), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 52/252 (20%), Positives = 97/252 (38%), Gaps = 6/252 (2%)
Query: 454 YIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQAHDLLDE 513
Y L+ + GK +E L +K+ L+ D +I + G +D A ++LD
Sbjct: 266 YSVLISSLCRDGKVEEGVGLLKDMKKKGLE--PDGYCYDPLIAVLCKEGRVDLAIEVLDV 323
Query: 514 MHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQKD 573
M G Y ++L + R E ++ G +AS Y + +
Sbjct: 324 MISDGCVPDIVNYNTILACLCKQKRADEALSIFEKLGEVGCSPNASSYNTVFSALGSSGH 383
Query: 574 TPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVK-EGQRIDCGVHD 632
AL + EM + P + L+ ++ +LL +++ E V
Sbjct: 384 KVRALGMILEMLDXVDPDV--IAYNSLISCLCRDGMVDEAIELLVDMEMESSECKPSVVS 441
Query: 633 WNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEM 692
+N V+ C+ + DA + L M G LPN T+ ++ G GG + +L +
Sbjct: 442 YNIVLLGLCRVGRVSDATEVLAAMVDKGCLPNETTYTFLIEGI-GFGGWLNDARDLATTL 500
Query: 693 KSFASSTSMNFD 704
+ + + +F+
Sbjct: 501 VNMDAISEHSFE 512
>gi|255539805|ref|XP_002510967.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223550082|gb|EEF51569.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 774
Score = 56.2 bits (134), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 95/444 (21%), Positives = 182/444 (40%), Gaps = 50/444 (11%)
Query: 246 LIAMKPNTNTFNIALAGCLLFETTRKAEQLLDIMPRIGVKADSNLLIIMAHIYERNGRRE 305
L+ P+ +TFN + G + +L+D M G + ++ + R G+ +
Sbjct: 271 LMGCLPDVDTFNDVIYGLCRLNRIHEGAKLVDRMLFRGFTPNDITYGVLMNGLCRVGKVD 330
Query: 306 ELRKLQRHIDEAVNLSDIQFRQFYNCLLSCHLKFGDLNSASKMVLEMLQRAKEARNSLAA 365
E + L + +D+ F L++ ++K G L+ A+ + + K +N
Sbjct: 331 EAQVLLNKVPTP---NDVHF----TILINGYVKSGRLDEANAFLYD-----KMIKNGCRP 378
Query: 366 AMLPFNAV--GVNNRTPSEQNVNCTNSVDLENSGIIENHILSY----EDFTKDRKFVALE 419
+ FN + G+ + V+ N D+ +G N +++Y + F K +
Sbjct: 379 DVFTFNTLIHGLCKKGLMGSAVDMVN--DMSANGCTPN-LITYTTLLDGFCKKNQL---- 431
Query: 420 AEVKRVLQTLLGMLQKQVELITTEHGILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEK 479
E VL M K EL + +L ++A + GK + L E
Sbjct: 432 EEAGYVLNE---MSAKGFELNIMGYNVL----------LRALCKNGKVPKALDML--GEM 476
Query: 480 ENLQVSHDDAALGHVITLCISLGWLDQAHD---LLDEMHLAGVRASSSVYASLLKAYIEA 536
+ D TL L +D+ D L +M L GV A++ Y +L+ A++
Sbjct: 477 SDKGCKPDIFTFN---TLIFGLCKVDRKEDALALYRDMLLDGVIANTVTYNTLIHAFLRG 533
Query: 537 NRPREVTALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQE 596
+E L+ D G LD Y L+++ T AL LF EM + S +
Sbjct: 534 GAIQEALKLVNDMLFRGCPLDEITYNGLIKAFCKLGATEKALGLFDEMVRKDLVPS-NIS 592
Query: 597 FEMLVKGCAQNHEAGLMAKLLQE-VKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKR 655
+L+ G + + +LL++ + G D V +N++I+ CK +++A +
Sbjct: 593 CNLLINGLCRVGKVCNALELLRDMIHRGLAPD--VVTYNSLINGLCKMGNIREAFNLFNK 650
Query: 656 MRSLGHLPNAQTFHSMVTGYAAIG 679
+++ G P+A T+++++ + G
Sbjct: 651 LQAEGIQPDAITYNTLICWHCRAG 674
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 48/244 (19%), Positives = 92/244 (37%), Gaps = 39/244 (15%)
Query: 449 PTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQAH 508
P + + L+ ++++G+ E FL +N D +I G + A
Sbjct: 342 PNDVHFTILINGYVKSGRLDEANAFLYDKMIKN-GCRPDVFTFNTLIHGLCKKGLMGSAV 400
Query: 509 DLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSK 568
D++++M G + Y +LL + + N+ E +L + + G +L+ Y LL++
Sbjct: 401 DMVNDMSANGCTPNLITYTTLLDGFCKKNQLEEAGYVLNEMSAKGFELNIMGYNVLLRAL 460
Query: 569 IVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRIDC 628
P AL + EM + KGC +
Sbjct: 461 CKNGKVPKALDMLGEMSD---------------KGCKPD--------------------- 484
Query: 629 GVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTEL 688
+ +N +I CK +DA + M G + N T+++++ + GG E +L
Sbjct: 485 -IFTFNTLIFGLCKVDRKEDALALYRDMLLDGVIANTVTYNTLIHAFLR-GGAIQEALKL 542
Query: 689 WGEM 692
+M
Sbjct: 543 VNDM 546
Score = 49.7 bits (117), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 72/177 (40%), Gaps = 13/177 (7%)
Query: 504 LDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEA 563
+++A LL+EM L G + ++ NR E L+ G + Y
Sbjct: 259 VNEALKLLEEMFLMGCLPDVDTFNDVIYGLCRLNRIHEGAKLVDRMLFRGFTPNDITYGV 318
Query: 564 LLQS--KIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQE-- 619
L+ ++ + D L +K+P F +L+ G ++ L +
Sbjct: 319 LMNGLCRVGKVDEAQVLL-------NKVPTPNDVHFTILINGYVKSGRLDEANAFLYDKM 371
Query: 620 VKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYA 676
+K G R D V +N +IH CKK LM A + M + G PN T+ +++ G+
Sbjct: 372 IKNGCRPD--VFTFNTLIHGLCKKGLMGSAVDMVNDMSANGCTPNLITYTTLLDGFC 426
Score = 42.7 bits (99), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 37/172 (21%), Positives = 72/172 (41%), Gaps = 6/172 (3%)
Query: 510 LLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKI 569
LLD + + Y +L + AN P + + S G+ + ++++
Sbjct: 160 LLDMKGVYCCEPTFKSYNVVLDILVSANCPSVAANVFYEMLSKGVIPTVYTFGVVMKALC 219
Query: 570 VQKDTPGALHLFKEM-KESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEV-KEGQRID 627
+ + A L ++M K +P S ++ L+ ++ KLL+E+ G D
Sbjct: 220 MVNEVDNACSLLRDMTKHGCVPNS--VVYQTLIHALSKRDRVNEALKLLEEMFLMGCLPD 277
Query: 628 CGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIG 679
V +N+VI+ C+ + + K + RM G PN T+ ++ G +G
Sbjct: 278 --VDTFNDVIYGLCRLNRIHEGAKLVDRMLFRGFTPNDITYGVLMNGLCRVG 327
>gi|222613072|gb|EEE51204.1| hypothetical protein OsJ_32019 [Oryza sativa Japonica Group]
Length = 615
Score = 56.2 bits (134), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 61/294 (20%), Positives = 122/294 (41%), Gaps = 23/294 (7%)
Query: 447 LQPTEKIYIKLVKAFLEAGK---TKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGW 503
L+P Y L++ + G+ +++L +++ + V D +I C G
Sbjct: 310 LEPDIATYRTLLQGHCKEGRVIESEKLFDLMVR-----IGVKPDIITYNTLIDGCCLAGK 364
Query: 504 LDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEA 563
+D+A LL M GV+ Y +L+ Y +R + AL ++ S+G+ + Y
Sbjct: 365 MDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNI 424
Query: 564 LLQSKIVQKDTPGALHLFKEMKESKIPRSGHQ----EFEMLVKGCAQNHEAGLMAKLLQE 619
+LQ + T A L+ I +SG Q + +++ G +N+ ++ Q
Sbjct: 425 ILQGLFHTRRTAAAKELY-----VSITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQN 479
Query: 620 VKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIG 679
+ + +N +I K M +A+ + G +P+ +T+ M
Sbjct: 480 LCLTD-LQLETRTFNIMIGALLKCGRMDEAKDLFAAHSANGLVPDVRTYSLMAENLIE-Q 537
Query: 680 GKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEE 733
G E+ +L+ M+ S D +L+S++ ++ G RA + M++E
Sbjct: 538 GSLEELDDLFLSMEENGCSA----DSRMLNSIVRKLLQRGDITRAGTYLFMIDE 587
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 95/252 (37%), Gaps = 36/252 (14%)
Query: 445 GILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVIT-LCISLGW 503
G + PT Y L+ AG+ L K+ +V D ++ LC
Sbjct: 86 GKVTPTVHTYAILIGCCCRAGRLDLGFAALGNVVKKGFRV--DAITFTPLLKGLCADKRT 143
Query: 504 LDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLR---DARSAGIQLDASC 560
D +L M G Y +LLK + NR +E LL D R G D
Sbjct: 144 SDAMDIVLRRMTELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVS 203
Query: 561 YEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEV 620
Y +L FKE ++K+ AQ + M L V
Sbjct: 204 YNTVLNG------------FFKEGIQTKLT--------------AQAMDKA-MEVLNTMV 236
Query: 621 KEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGG 680
K G DC +N+++H +C ++A LK+MRS G PN T+ S++ Y G
Sbjct: 237 KNGVMPDC--MTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMN-YLCKNG 293
Query: 681 KYTEVTELWGEM 692
+ TE +++ M
Sbjct: 294 RSTEARKIFDSM 305
>gi|125525011|gb|EAY73125.1| hypothetical protein OsI_00999 [Oryza sativa Indica Group]
Length = 634
Score = 56.2 bits (134), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 89/200 (44%), Gaps = 10/200 (5%)
Query: 443 EHGILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLG 502
+ G+L P ++ L+K FL+A + L E + D H + S+G
Sbjct: 324 DSGVL-PNVIVFNTLLKGFLDANDMAAVDDVL--GLMEQFGIKPDIVTYSHQLNALSSMG 380
Query: 503 WLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYE 562
+ + + D+M AG+ VY+ L K Y+ A +P + LLR G++ + +
Sbjct: 381 HMAKCMKVFDKMIEAGIEPDPQVYSILAKGYVRAQQPEKAEELLRQMGRLGVRPNVVTFT 440
Query: 563 ALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCA---QNHEAGLMAKLLQE 619
++ D A+ ++ M+++ + R + FE L+ G + Q +A + +++Q+
Sbjct: 441 TVISGWCSVADMGNAVRVYAAMRDAGV-RPNLRTFETLIWGYSELKQPWKAEEVLQMMQD 499
Query: 620 --VKEGQRIDCGVHD-WNNV 636
V+ Q C V D W V
Sbjct: 500 AGVRPKQTTYCLVADAWKAV 519
Score = 53.1 bits (126), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 55/232 (23%), Positives = 104/232 (44%), Gaps = 7/232 (3%)
Query: 449 PTEKIYIKLVKAFLEAGKTKELTHFLIK-AEKENLQVSHDDAALGHVITLCISLGWLDQA 507
P Y L A+ + +T +++ A++ L+ S + G ++ G L +A
Sbjct: 258 PDVVTYNTLASAYAKNDETWRAEELVVEMAQQAGLRTS--ERTWGIIVGGYCREGRLGEA 315
Query: 508 HDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQS 567
+ +M +GV + V+ +LLK +++AN V +L GI+ D Y L +
Sbjct: 316 LRCVRQMKDSGVLPNVIVFNTLLKGFLDANDMAAVDDVLGLMEQFGIKPDIVTYSHQLNA 375
Query: 568 KIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEV-KEGQRI 626
+ +F +M E+ I Q + +L KG + + +LL+++ + G R
Sbjct: 376 LSSMGHMAKCMKVFDKMIEAGI-EPDPQVYSILAKGYVRAQQPEKAEELLRQMGRLGVRP 434
Query: 627 DCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAI 678
+ V + VI +C M +A + MR G PN +TF +++ GY+ +
Sbjct: 435 N--VVTFTTVISGWCSVADMGNAVRVYAAMRDAGVRPNLRTFETLIWGYSEL 484
Score = 45.8 bits (107), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 49/255 (19%), Positives = 107/255 (41%), Gaps = 10/255 (3%)
Query: 448 QPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQA 507
+P+ Y L+ A L + + + +L+ AE E+ + D +I + + +A
Sbjct: 111 RPSLVTYTTLLAA-LTSQRAFDTIPWLL-AEVEDAGLRPDSIFFNALINALVEARRMGEA 168
Query: 508 HDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALL------RDARSAGIQLDASCY 561
+ M +G R ++S + +L+K Y A RP E + A ++ + + Y
Sbjct: 169 TNTFLRMGHSGCRPTASTFNTLIKGYGIAGRPEESQRVFDMMASGGAGGEAAVRPNLTTY 228
Query: 562 EALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVK 621
L+++ A + M+ S + L A+N E +L+ E+
Sbjct: 229 NILVKAWCDAGRLEEAWRVVARMRASGAD-PDVVTYNTLASAYAKNDETWRAEELVVEMA 287
Query: 622 EGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGK 681
+ + W ++ +C++ + +A + +++M+ G LPN F++++ G+
Sbjct: 288 QQAGLRTSERTWGIIVGGYCREGRLGEALRCVRQMKDSGVLPNVIVFNTLLKGFLD-AND 346
Query: 682 YTEVTELWGEMKSFA 696
V ++ G M+ F
Sbjct: 347 MAAVDDVLGLMEQFG 361
>gi|224124604|ref|XP_002319373.1| predicted protein [Populus trichocarpa]
gi|222857749|gb|EEE95296.1| predicted protein [Populus trichocarpa]
Length = 810
Score = 56.2 bits (134), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 75/328 (22%), Positives = 140/328 (42%), Gaps = 29/328 (8%)
Query: 438 ELITTEHGILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITL 497
+L+ E G+L+ Y +VKA+ +A K + L K + N D+ +I +
Sbjct: 334 DLLGPEKGVLE-----YNVMVKAYGKA-KLYDKAFSLFKGMR-NHGTWPDEVTYNSLIQM 386
Query: 498 CISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLD 557
+DQA DLLDEM AG + +++++ Y + + + ++ AG++ +
Sbjct: 387 FSGGDLMDQARDLLDEMQEAGFKPQCLTFSAVMACYARLGQLSDAVDVYQEMVKAGVKPN 446
Query: 558 ASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVK-----GCAQNHEAGL 612
Y +L+ + AL F+ M+ES IP + L+K GC A
Sbjct: 447 EVVYGSLINGFAEVGNVEEALKYFRMMEESGIP-ANQIVLTSLIKVYSKLGCFDG--AKH 503
Query: 613 MAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMV 672
+ K +++++ G I N++I + ++ +AE K +R G + +F +M+
Sbjct: 504 LYKKMKDLEGGPDIIAS----NSMISLYADLGMISEAELVFKNLRENGQ-ADGVSFATMM 558
Query: 673 TGYAAIGGKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMME 732
Y ++ G E ++ EMK + + D + V+ + G E++ M
Sbjct: 559 YLYKSM-GMLDEAIDIAEEMK----QSGLLRDCVSYNKVMACYATNGQLRECAELLHEMI 613
Query: 733 EGKMFIDKYKYRTLFLKYHKTLYKGKTP 760
K+ D ++ LF L KG P
Sbjct: 614 GQKLLPDGGTFKILF----TVLKKGGFP 637
>gi|357499659|ref|XP_003620118.1| Pentatricopeptide repeat protein-like protein [Medicago truncatula]
gi|355495133|gb|AES76336.1| Pentatricopeptide repeat protein-like protein [Medicago truncatula]
Length = 841
Score = 56.2 bits (134), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 79/170 (46%), Gaps = 4/170 (2%)
Query: 504 LDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEA 563
+D+A L EMH + Y+SL+ ++ R L+ + G Q D Y +
Sbjct: 489 VDEAMKLFKEMHHKQIFPDVITYSSLIDGLCKSGRISYALELVDEMHYRGQQPDIITYNS 548
Query: 564 LLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQE-VKE 622
+L + + A+ L ++K I R + +LVKG Q+ + K+ ++ + +
Sbjct: 549 ILDALCKKHHVDKAITLLTKLKGQGI-RPDMNTYTILVKGLCQSGKLEDARKVFEDLLVK 607
Query: 623 GQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMV 672
G +D V+ + +I FC K L +A L +M G +P+A+T+ ++
Sbjct: 608 GYNLD--VYAYTVMIQGFCDKGLFDEALALLSKMEENGCIPDAKTYEIII 655
Score = 42.4 bits (98), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 53/274 (19%), Positives = 109/274 (39%), Gaps = 22/274 (8%)
Query: 429 LLGMLQKQVELIT--TEHGILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQ--- 483
++G L+ ++L T I+ P + LV F + G KE + L K++++
Sbjct: 380 IVGKLKDAIDLFNKMTSKNII-PDVYTFSILVDGFCKDGNIKEAKNVLAMMMKQSIKPDV 438
Query: 484 VSHDDAALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVT 543
V++ G+ + + +++A + + M GV A+ Y ++ + + E
Sbjct: 439 VTYSSLMDGYCL-----VNEVNKAESIFNTMSHRGVTANVQSYNIMINGFCKIKMVDEAM 493
Query: 544 ALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQ----EFEM 599
L ++ I D Y +L+ AL L EM G Q +
Sbjct: 494 KLFKEMHHKQIFPDVITYSSLIDGLCKSGRISYALELVDEMH-----YRGQQPDIITYNS 548
Query: 600 LVKGCAQNHEAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSL 659
++ + H LL ++K GQ I ++ + ++ C+ ++DA K + +
Sbjct: 549 ILDALCKKHHVDKAITLLTKLK-GQGIRPDMNTYTILVKGLCQSGKLEDARKVFEDLLVK 607
Query: 660 GHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEMK 693
G+ + + M+ G+ G + E L +M+
Sbjct: 608 GYNLDVYAYTVMIQGFCD-KGLFDEALALLSKME 640
Score = 40.0 bits (92), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 28/118 (23%), Positives = 56/118 (47%), Gaps = 3/118 (2%)
Query: 504 LDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEA 563
+D+A LL ++ G+R + Y L+K ++ + + + D G LD Y
Sbjct: 559 VDKAITLLTKLKGQGIRPDMNTYTILVKGLCQSGKLEDARKVFEDLLVKGYNLDVYAYTV 618
Query: 564 LLQSKIVQKDTPGALHLFKEMKESK-IPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEV 620
++Q + AL L +M+E+ IP + + +E+++ + E + KLL+E+
Sbjct: 619 MIQGFCDKGLFDEALALLSKMEENGCIPDA--KTYEIIILSLFEKDENDMAEKLLREM 674
>gi|410110069|gb|AFV61114.1| pentatricopeptide repeat-containing protein 123, partial [Aloysia
lycioides]
Length = 429
Score = 55.8 bits (133), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 45/195 (23%), Positives = 89/195 (45%), Gaps = 22/195 (11%)
Query: 505 DQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEAL 564
++A++L+ EM G+ +S Y++++ + + + L + RS+G+++D + L
Sbjct: 238 EKANNLIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEID----QVL 293
Query: 565 LQSKIVQKDTPG----ALHLFKEMKE-SKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQE 619
Q+ IV + G A L E+K IPR ++ G + EA + + Q
Sbjct: 294 YQTMIVAYERAGLVAHAKRLLHELKSPDNIPRDTAIH---ILAGAGRIEEATYVFR--QA 348
Query: 620 VKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAI- 678
+ G+ D V + +IH F K + + + +MR LG+ P++ ++ Y +
Sbjct: 349 IDAGEVKDITV--FERMIHLFSKYKKYANVVEVFDKMRGLGYFPDSNVIALVLNAYGKLH 406
Query: 679 -----GGKYTEVTEL 688
G Y E+ E+
Sbjct: 407 EFDKANGVYMEMQEV 421
Score = 48.5 bits (114), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 63/315 (20%), Positives = 129/315 (40%), Gaps = 40/315 (12%)
Query: 447 LQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQ 506
L P Y L+ F + G +L K E++ +V D ++I L L +
Sbjct: 7 LSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQD--RVPGDLVLYSNLIELSRKLCDYSK 64
Query: 507 AHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQ 566
A + + +G Y +++ + +A RE +L+ + R+AG+ + + Y LL
Sbjct: 65 AISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVMPNTASYSTLLT 124
Query: 567 SKIVQKDTPGALHLFKEMKESK-------------------IPRSGHQEFEMLVK-GCAQ 606
+ K AL +F EM+E K + + + F + K G
Sbjct: 125 MYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEP 184
Query: 607 N-----------HEAGLMAKLLQEVKEGQR--IDCGVHDWNNVIHFFCKKRLMQDAEKAL 653
N +A L + + + QR I V +N+++ + K + A +
Sbjct: 185 NVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIVQNVVTYNSMMMIYGKTLEHEKANNLI 244
Query: 654 KRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEMKSFASSTSMNFDEELLDSVLY 713
+ M++ G PN+ T+ ++++ + + GK L+ +++ S+ + D+ L +++
Sbjct: 245 QEMQNRGIEPNSITYSTIISIWGKV-GKLDRAAMLFQKLR----SSGVEIDQVLYQTMIV 299
Query: 714 TFVRGGFFARANEVV 728
+ R G A A ++
Sbjct: 300 AYERAGLVAHAKRLL 314
>gi|125572252|gb|EAZ13767.1| hypothetical protein OsJ_03693 [Oryza sativa Japonica Group]
Length = 715
Score = 55.8 bits (133), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 57/249 (22%), Positives = 106/249 (42%), Gaps = 16/249 (6%)
Query: 431 GMLQKQVELI--TTEHGILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDD 488
GM+++ ++++ + HG T I ++ + G+ + FL + S D
Sbjct: 330 GMVERAIQVLEQMSGHGCAANTTLCNI-VINTICKQGRVDDAFQFL--NNMGSYGCSPDT 386
Query: 489 AALGHVIT-LCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLR 547
+ V+ LC + W D A +LL EM + + + + + + T L+
Sbjct: 387 ISYTTVLKGLCRAERWED-AKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIE 445
Query: 548 DARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQN 607
G +++ Y AL+ VQ AL LF M + + L+ G
Sbjct: 446 QMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSMP----CKPNTITYTTLLTGLCNA 501
Query: 608 HEAGLMAKLLQEVKEGQRIDCG--VHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNA 665
A+LL E+ + DC V +N ++ FFC+K LM +A + +++M G PN
Sbjct: 502 ERLDAAAELLAEMLQK---DCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNL 558
Query: 666 QTFHSMVTG 674
T+++++ G
Sbjct: 559 ITYNTLLDG 567
Score = 46.6 bits (109), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 59/300 (19%), Positives = 108/300 (36%), Gaps = 14/300 (4%)
Query: 449 PTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQAH 508
P + KL++ G+T + L AE+ V D A ++ G LD A
Sbjct: 107 PDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAV--DVFAYNTLVAGYCRYGQLDAAR 164
Query: 509 DLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSK 568
L+ M +A + Y +++ + R E +LL D G Q Y LL++
Sbjct: 165 RLIASMPVA---PDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQPSVVTYTVLLEAV 221
Query: 569 IVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKE-GQRID 627
A+ + EM+ +K + +++ G + + L + G + D
Sbjct: 222 CKSTGFGQAMEVLDEMR-AKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPD 280
Query: 628 CGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTE 687
+ V+ C + +D E+ M +PN TF M+ + GG +
Sbjct: 281 --TVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTF-DMLVRFFCRGGMVERAIQ 337
Query: 688 LWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFIDKYKYRTLF 747
+ +M + + L + V+ T + G A + + M D Y T+
Sbjct: 338 VLEQMSGHGCAANTT----LCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVL 393
>gi|357123699|ref|XP_003563545.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
mitochondrial-like [Brachypodium distachyon]
Length = 492
Score = 55.8 bits (133), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 55/237 (23%), Positives = 109/237 (45%), Gaps = 9/237 (3%)
Query: 505 DQAHDL--LDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYE 562
D AH L L +M AG+R S++ YA L++A A R E ALL + R G++ DA+ Y
Sbjct: 68 DLAHSLHVLADMEAAGMRPSAAAYARLIRALARAGRTLEAEALLLEMRHLGLRPDAAHYN 127
Query: 563 ALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKE 622
ALL+ + + A L +M + + R+ + + +L+ A+ +L E+K
Sbjct: 128 ALLEGLLARAHLCLADRLLLQMADDGVARN-RRTYMLLLDAYARAGRLEDSWWVLGEMKR 186
Query: 623 GQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKY 682
+ I ++ ++ + + + A + M+ LG + + ++ ++ + G+
Sbjct: 187 -RGIQLDTAGYSTLVRLYRDNGMWKKATDLIMEMQELGVELDVKIYNGLIDTFGKY-GQL 244
Query: 683 TEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFID 739
+ L+ +M+ + + D ++++ R G RA A M+E M+ D
Sbjct: 245 ADARRLFEKMR----AEGIKPDIATWNALIRWHCRVGNMKRALRFFAAMQEEGMYPD 297
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 65/327 (19%), Positives = 131/327 (40%), Gaps = 75/327 (22%)
Query: 439 LITTEHGILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQ--VSHDDAALGHVIT 496
L E ++P+ Y +L++A AG+T E L++ L+ +H +A L ++
Sbjct: 76 LADMEAAGMRPSAAAYARLIRALARAGRTLEAEALLLEMRHLGLRPDAAHYNALLEGLLA 135
Query: 497 ---LCIS----------------------------LGWLDQAHDLLDEMHLAGVRASSSV 525
LC++ G L+ + +L EM G++ ++
Sbjct: 136 RAHLCLADRLLLQMADDGVARNRRTYMLLLDAYARAGRLEDSWWVLGEMKRRGIQLDTAG 195
Query: 526 YASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMK 585
Y++L++ Y + ++ T L+ + + G++LD Y L+ + A LF++M+
Sbjct: 196 YSTLVRLYRDNGMWKKATDLIMEMQELGVELDVKIYNGLIDTFGKYGQLADARRLFEKMR 255
Query: 586 ESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRL 645
EG + D + WN +I + C+
Sbjct: 256 -----------------------------------AEGIKPD--IATWNALIRWHCRVGN 278
Query: 646 MQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEMKSFASSTSMNFDE 705
M+ A + M+ G P+ + F S+++ GK+ E+ +L+ +M++ S
Sbjct: 279 MKRALRFFAAMQEEGMYPDPKIFMSIISRLGE-QGKWDELKKLFDKMRNRGLKESGAVYA 337
Query: 706 ELLDSVLYTFVRGGFFARANEVVAMME 732
L+D + + G F A+E VA ++
Sbjct: 338 VLVD----IYGQYGRFRDAHECVAALK 360
>gi|297738285|emb|CBI27486.3| unnamed protein product [Vitis vinifera]
Length = 509
Score = 55.8 bits (133), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 69/326 (21%), Positives = 127/326 (38%), Gaps = 28/326 (8%)
Query: 447 LQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQ 506
L+P Y + AF + G +E F + + + ++ ++ +I G L +
Sbjct: 157 LKPNVVTYSTFIDAFCKEGMLQEAIKFFVDMRR--VALTPNEFTYTSLIDANCKAGNLAE 214
Query: 507 AHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQ 566
A L++E+ AG++ + Y +LL E R +E + R +AG+ + Y AL+
Sbjct: 215 ALKLVEEILQAGIKLNVVTYTALLDGLCEEGRMKEAEEVFRAMLNAGVAPNQETYTALVH 274
Query: 567 SKIVQKDTPGALHLFKEMKESKIP---------------RSGHQEFEML---VKGCAQNH 608
I K+ A + KEMKE I S +E ++L +K N
Sbjct: 275 GFIKAKEMEYAKDILKEMKEKCIKPDLLLYGTILWGLCNESRLEEAKLLIGEIKESGINT 334
Query: 609 EAGLMAKLLQE-VKEGQRIDC--GVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNA 665
A + L+ K GQ + + + +++ CK + A+K M G +P+
Sbjct: 335 NAVIYTTLMDAYFKSGQATEALTLLEEMLDLVDGLCKNNCFEVAKKLFDEMLDKGMMPDK 394
Query: 666 QTFHSMVTGYAAIGGKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARAN 725
+ +++ G G E L M M D ++++ G +A
Sbjct: 395 IAYTALIDGNMK-HGNLQEALNLRDRMIEIG----MELDLHAYTALIWGLSHSGQVQKAR 449
Query: 726 EVVAMMEEGKMFIDKYKYRTLFLKYH 751
++ M + D+ Y L KY+
Sbjct: 450 NLLDEMIGKGVLPDEVVYMCLIKKYY 475
Score = 43.5 bits (101), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 57/248 (22%), Positives = 104/248 (41%), Gaps = 25/248 (10%)
Query: 449 PTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQAH 508
P ++ Y LV F++A K E ++K KE + D G ++ + L++A
Sbjct: 264 PNQETYTALVHGFIKA-KEMEYAKDILKEMKEKC-IKPDLLLYGTILWGLCNESRLEEAK 321
Query: 509 DLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSK 568
L+ E+ +G+ ++ +Y +L+ AY ++ + E LL + +D C +
Sbjct: 322 LLIGEIKESGINTNAVIYTTLMDAYFKSGQATEALTLLEEMLDL---VDGLCKNNCFEV- 377
Query: 569 IVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLL----QEVKEGQ 624
A LF EM + + + L+ G N + G + + L + ++ G
Sbjct: 378 --------AKKLFDEMLDKGM-MPDKIAYTALIDG---NMKHGNLQEALNLRDRMIEIGM 425
Query: 625 RIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTE 684
+D +H + +I +Q A L M G LP+ + ++ Y A+ GK E
Sbjct: 426 ELD--LHAYTALIWGLSHSGQVQKARNLLDEMIGKGVLPDEVVYMCLIKKYYAL-GKVDE 482
Query: 685 VTELWGEM 692
EL EM
Sbjct: 483 ALELQNEM 490
Score = 41.2 bits (95), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 74/177 (41%), Gaps = 23/177 (12%)
Query: 538 RPREVTALL----------------RDARSAGIQLDASCYEALLQSKIVQKDTPGALHLF 581
+PR ALL +D +AGI+ Y ++ + D A LF
Sbjct: 20 KPRSCNALLHRLSKVGRGDLSRKFFKDMGAAGIKRSVFTYNIMIDYLCKEGDLEMARSLF 79
Query: 582 KEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRIDCG--VHDWNNVIHF 639
+MKE+ + L+ G + + GL+ + + ++ + DC V +N +I+
Sbjct: 80 TQMKEAGFTPD-IVTYNSLIDG---HGKLGLLDECICIFEQMKDADCDPDVITYNALINC 135
Query: 640 FCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEMKSFA 696
FCK M A + L M++ G PN T+ + + + G E + + +M+ A
Sbjct: 136 FCKFERMPKAFEFLHEMKANGLKPNVVTYSTFIDAFCK-EGMLQEAIKFFVDMRRVA 191
>gi|242089061|ref|XP_002440363.1| hypothetical protein SORBIDRAFT_09g030360 [Sorghum bicolor]
gi|241945648|gb|EES18793.1| hypothetical protein SORBIDRAFT_09g030360 [Sorghum bicolor]
Length = 715
Score = 55.8 bits (133), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 87/210 (41%), Gaps = 3/210 (1%)
Query: 502 GWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCY 561
G L++A LL +M G++ Y+ L+ Y + R E + G DA Y
Sbjct: 204 GQLEEAVRLLKKMSGGGLQPDVVTYSLLIDYYCKIGRCTEARNIFDSMVRRGQNPDAYTY 263
Query: 562 EALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVK 621
LL + L M + IP H F +L++ A+N E++
Sbjct: 264 RTLLHGYATKGALVDMHDLLALMIQDGIPLEDHV-FNILIRAYAKNETLDKAMTAFIEMR 322
Query: 622 EGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGK 681
+ + V + VI CK ++DA +M S G P+ TF S++ G I G+
Sbjct: 323 Q-KGFSPNVVTYTTVIDILCKAGRVEDAVSHFSQMVSEGLSPDIITFTSLIHGLCTI-GE 380
Query: 682 YTEVTELWGEMKSFASSTSMNFDEELLDSV 711
+ +V +L EM + + F ++DS+
Sbjct: 381 WKKVEKLSFEMINRGIHPNAIFLNTIMDSL 410
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 62/269 (23%), Positives = 111/269 (41%), Gaps = 22/269 (8%)
Query: 502 GWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCY 561
G + +AHD D++ GV+ Y L+ Y + E LL S G++ D Y
Sbjct: 414 GRVLEAHDFFDQIIHVGVKPDVVSYTILIDGYCLDGKMDESIKLLGRMVSIGLRPDNVTY 473
Query: 562 EALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAK---LLQ 618
ALL AL L++EM SK + + +++ G H ++A ++
Sbjct: 474 SALLNGYCKNGRVDDALALYREMF-SKDVKPNAITYNIILHGLF--HAGRVVAAREFYMK 530
Query: 619 EVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAI 678
V G I G++ +N V+ C+ + +A + + +RS +TF+ M+ G +
Sbjct: 531 IVDSG--IQLGINTYNIVLGGLCENSFVDEALRMFQGLRSKEFQLEVRTFNIMIVGLLKV 588
Query: 679 GGKYTEVTELWGEMKSFASS---TSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGK 735
G G+ KS S+ + + D + ++ + + G ++E+ ME+
Sbjct: 589 G--------RIGDAKSLFSAILPSGLVPDAIIYGLMIQSHIEEGLLEESDELFLSMEKNG 640
Query: 736 MFIDKYKYRTLFLKYHKTLYKGKTPKFQT 764
+ RTL K L KG + T
Sbjct: 641 CTANS---RTLNAIVRKLLEKGDVRRAGT 666
Score = 41.6 bits (96), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 52/238 (21%), Positives = 95/238 (39%), Gaps = 28/238 (11%)
Query: 542 VTALLRDARSAGIQLDASCYEALLQSKIVQ--KDTPGALHLFKEMKESKIPRSGHQEFEM 599
V L DA + GI + C LL + + + + A+H+ + + P + M
Sbjct: 87 VNKLATDACTFGILIRCFCNVGLLDFALEEESRGSRAAVHMMADDGYNCPPNV--LSYNM 144
Query: 600 LVKGCAQNHEAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSL 659
++ G + E L E+ GQ + +N+VI CK + M AE L++M
Sbjct: 145 VINGLFKEGEVDKAYTLFHEML-GQGFPPNIVTYNSVIDGLCKAQAMDKAEAVLQQMFDK 203
Query: 660 GHL----------------PNAQTFHSMVTGYAAIGGKYTEVTELWGEMKSFASSTSMNF 703
G L P+ T+ ++ Y I G+ TE ++ M N
Sbjct: 204 GQLEEAVRLLKKMSGGGLQPDVVTYSLLIDYYCKI-GRCTEARNIFDSM----VRRGQNP 258
Query: 704 DEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFIDKYKYRTLFLKYHK--TLYKGKT 759
D ++L+ + G ++++A+M + + ++ + + L Y K TL K T
Sbjct: 259 DAYTYRTLLHGYATKGALVDMHDLLALMIQDGIPLEDHVFNILIRAYAKNETLDKAMT 316
>gi|224132330|ref|XP_002328242.1| predicted protein [Populus trichocarpa]
gi|222837757|gb|EEE76122.1| predicted protein [Populus trichocarpa]
Length = 893
Score = 55.8 bits (133), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 56/245 (22%), Positives = 98/245 (40%), Gaps = 27/245 (11%)
Query: 507 AHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQ 566
A +L++M G++ S ++Y ++ + R E L G+ D Y ++
Sbjct: 569 AFGILEQMDEMGLKPSVAIYDCIIACLSQQRRISEAETLFCRMLENGVDPDEVAYMTMIN 628
Query: 567 SKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGC--------AQNHEAGLMAKLLQ 618
+ ALHLF+ M ++ I S + + LV G A+N G M L
Sbjct: 629 AYARNGKGVKALHLFEMMIKNAIQPSSYS-YTALVAGNRRLSIEAHAENKRTGFMPNL-- 685
Query: 619 EVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAI 678
+ +N + FC L++DA L+ M+ G LPN TF +++ G
Sbjct: 686 ------------YLYNVTVSGFCWVNLIEDAYHQLRLMQEEGLLPNEVTF-TILIGAHGR 732
Query: 679 GGKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFI 738
G+ L+ M + ST D +++L + R G A +V + + F
Sbjct: 733 AGEIDRAIGLFNRMNADGCSTP---DRCTYNTLLKSLCRSGRELDALSLVHTISKRGFFP 789
Query: 739 DKYKY 743
++ Y
Sbjct: 790 NRLAY 794
>gi|46518477|gb|AAS99720.1| At2g19280 [Arabidopsis thaliana]
gi|62319953|dbj|BAD94048.1| putative salt-inducible protein [Arabidopsis thaliana]
gi|110738808|dbj|BAF01327.1| putative salt-inducible protein [Arabidopsis thaliana]
Length = 693
Score = 55.8 bits (133), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 51/250 (20%), Positives = 108/250 (43%), Gaps = 13/250 (5%)
Query: 447 LQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQ 506
L P Y ++ + G+T + + K S + + +I C G +
Sbjct: 404 LLPDCVCYTTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTI--LIGACSRFGSISD 461
Query: 507 AHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQ 566
A + M G++ Y +L+ Y + ++ +V L+ + RSAGI D + Y L+
Sbjct: 462 AESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIH 521
Query: 567 SKIVQKDTPGALHLFKEM-KESKIPRSGHQEFEMLVKGCAQN---HEAGLMAKLLQEVKE 622
S +V+ A + E+ + +P + F ++ G ++ EA ++ + ++
Sbjct: 522 SMVVRGYIDEANEIISELIRRGFVPST--LAFTDVIGGFSKRGDFQEAFILWFYMADL-- 577
Query: 623 GQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKY 682
R+ V + ++H +CK + M+ A ++ G P+ +++++ GY ++ G
Sbjct: 578 --RMKPDVVTCSALLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSV-GDI 634
Query: 683 TEVTELWGEM 692
+ EL G M
Sbjct: 635 EKACELIGLM 644
Score = 42.7 bits (99), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 59/263 (22%), Positives = 101/263 (38%), Gaps = 58/263 (22%)
Query: 502 GWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDAR----------- 550
G+L +A +L ++ L G+ S +S++ + + +P E L+ R
Sbjct: 320 GFLKEATSVLFKLKLFGISQDSVSVSSVIDGFCKVGKPEEAIKLIHSFRLRPNIFVYSSF 379
Query: 551 -----SAGIQLDAS----------------CYEALLQSKIVQKDTPGALHLFKEMKESKI 589
S G L AS CY ++ T A F + +S
Sbjct: 380 LSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGALLKSGN 439
Query: 590 PRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVK-EGQRIDCGVHDWNNVIHFFCKKRLMQD 648
P S +L+ C++ + + +K EG ++D V +NN++H + K +
Sbjct: 440 PPSLTTS-TILIGACSRFGSISDAESVFRNMKTEGLKLD--VVTYNNLMHGYGKTHQLNK 496
Query: 649 AEKALKRMRSLGHLPNAQTF----HSMVTGYAAIGGKYTEVTELWGEM--KSFASSTSMN 702
+ + MRS G P+ T+ HSMV + G E E+ E+ + F ST
Sbjct: 497 VFELIDEMRSAGISPDVATYNILIHSMV-----VRGYIDEANEIISELIRRGFVPST--- 548
Query: 703 FDEELLDSVLYTFVRGGFFARAN 725
+ +T V GGF R +
Sbjct: 549 --------LAFTDVIGGFSKRGD 563
>gi|115440343|ref|NP_001044451.1| Os01g0783100 [Oryza sativa Japonica Group]
gi|20804869|dbj|BAB92551.1| putative PPR protein [Oryza sativa Japonica Group]
gi|113533982|dbj|BAF06365.1| Os01g0783100 [Oryza sativa Japonica Group]
Length = 684
Score = 55.8 bits (133), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 57/249 (22%), Positives = 106/249 (42%), Gaps = 16/249 (6%)
Query: 431 GMLQKQVELI--TTEHGILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDD 488
GM+++ ++++ + HG T I ++ + G+ + FL + S D
Sbjct: 299 GMVERAIQVLEQMSGHGCAANTTLCNI-VINTICKQGRVDDAFQFL--NNMGSYGCSPDT 355
Query: 489 AALGHVIT-LCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLR 547
+ V+ LC + W D A +LL EM + + + + + + T L+
Sbjct: 356 ISYTTVLKGLCRAERWED-AKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIE 414
Query: 548 DARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQN 607
G +++ Y AL+ VQ AL LF M + + L+ G
Sbjct: 415 QMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSMP----CKPNTITYTTLLTGLCNA 470
Query: 608 HEAGLMAKLLQEVKEGQRIDCG--VHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNA 665
A+LL E+ + DC V +N ++ FFC+K LM +A + +++M G PN
Sbjct: 471 ERLDAAAELLAEMLQK---DCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNL 527
Query: 666 QTFHSMVTG 674
T+++++ G
Sbjct: 528 ITYNTLLDG 536
Score = 46.2 bits (108), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 59/300 (19%), Positives = 108/300 (36%), Gaps = 14/300 (4%)
Query: 449 PTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQAH 508
P + KL++ G+T + L AE+ V D A ++ G LD A
Sbjct: 76 PDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAV--DVFAYNTLVAGYCRYGQLDAAR 133
Query: 509 DLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSK 568
L+ M +A + Y +++ + R E +LL D G Q Y LL++
Sbjct: 134 RLIASMPVA---PDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQPSVVTYTVLLEAV 190
Query: 569 IVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKE-GQRID 627
A+ + EM+ +K + +++ G + + L + G + D
Sbjct: 191 CKSTGFGQAMEVLDEMR-AKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPD 249
Query: 628 CGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTE 687
+ V+ C + +D E+ M +PN TF M+ + GG +
Sbjct: 250 --TVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTF-DMLVRFFCRGGMVERAIQ 306
Query: 688 LWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFIDKYKYRTLF 747
+ +M + + L + V+ T + G A + + M D Y T+
Sbjct: 307 VLEQMSGHGCAANTT----LCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVL 362
>gi|410110105|gb|AFV61132.1| pentatricopeptide repeat-containing protein 123, partial [Lippia
aristata]
Length = 382
Score = 55.8 bits (133), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 53/255 (20%), Positives = 117/255 (45%), Gaps = 25/255 (9%)
Query: 447 LQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQ---VSHDDAALGHVITLCISLGW 503
++P Y L++ + +A E H +++N++ V+++ + + TL
Sbjct: 141 IEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTL-----E 195
Query: 504 LDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEA 563
++A++L+ EM G+ +S Y++++ + + + L + RS+GI++D +
Sbjct: 196 HEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGIEID----QI 251
Query: 564 LLQSKIVQKDTPG----ALHLFKEMKE-SKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQ 618
L Q+ IV + G A L E+K IPR ++ G + EA + + Q
Sbjct: 252 LFQTMIVAYERAGLVAHAKRLLHELKRPDNIPRDTAIH---ILAGAGRIEEATYVFR--Q 306
Query: 619 EVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAI 678
+ G+ D V + +IH K + + + +MR LG+ P++ ++ Y +
Sbjct: 307 AIDAGEVKDITV--FERMIHLLSKYKKYSNVVEVFDKMRGLGYFPDSDVIAIVLNAYGKL 364
Query: 679 GGKYTEVTELWGEMK 693
++ + +++ EM+
Sbjct: 365 -QEFDKANDVYMEMQ 378
Score = 49.7 bits (117), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 52/232 (22%), Positives = 106/232 (45%), Gaps = 25/232 (10%)
Query: 506 QAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALL 565
+A L+ EM AGV ++ Y++LL Y+E + E ++ + R LD + ++
Sbjct: 58 EARSLIGEMKAAGVMPNTXSYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMI 117
Query: 566 QSKIVQKDTPGALHLFKE-------MKESKI-PRSGHQEFEMLVKGCAQNH-EAGLMAKL 616
D G L + KE M++ I P + V G A+ EA + +L
Sbjct: 118 -------DVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRL 170
Query: 617 LQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYA 676
+Q + I+ V +N+++ + K + A ++ M+S G PN+ T+ ++++ +
Sbjct: 171 MQR----KNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWG 226
Query: 677 AIGGKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVV 728
+ GK L+ +++ S+ + D+ L +++ + R G A A ++
Sbjct: 227 KV-GKLDRAAMLFQKLR----SSGIEIDQILFQTMIVAYERAGLVAHAKRLL 273
>gi|225440005|ref|XP_002276355.1| PREDICTED: pentatricopeptide repeat-containing protein At2g37230
[Vitis vinifera]
Length = 763
Score = 55.8 bits (133), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 46/211 (21%), Positives = 96/211 (45%), Gaps = 3/211 (1%)
Query: 486 HDDAALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTAL 545
HD +I + L+ A +L +M GV ++ L+ +Y +A +E +
Sbjct: 150 HDRDTHLKIIEILGRASKLNHARCILLDMPKKGVEWDEDLFVLLIDSYGKAGIVQESVKV 209
Query: 546 LRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCA 605
+ + G++ Y+AL + + + A F M + + H + +++ G
Sbjct: 210 FQKMKELGVERTIKSYDALFKVILRRGRYMMAKRYFNAMLNEGVMPTCHT-YNIMIWGFF 268
Query: 606 QNHEAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNA 665
+ + + +E+KE +RI V +N +I+ + + + M++AEK M+ P
Sbjct: 269 LSLKVETANRFFEEMKE-RRISPDVVTYNTMINGYYRIKKMEEAEKFFVEMKGRNIEPTV 327
Query: 666 QTFHSMVTGYAAIGGKYTEVTELWGEMKSFA 696
++ +M+ GY ++ G+ + L+ EMKSF
Sbjct: 328 ISYTTMIKGYVSV-GRVDDGLRLFEEMKSFG 357
Score = 40.8 bits (94), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 52/264 (19%), Positives = 106/264 (40%), Gaps = 7/264 (2%)
Query: 396 SGIIENHILSYEDFTK---DRKFVALEAEVKRVLQTLLGMLQKQVELITTEHGILQPTEK 452
+GI++ + ++ + +R + +A K +L+ M+ K+ G++ PT
Sbjct: 200 AGIVQESVKVFQKMKELGVERTIKSYDALFKVILRRGRYMMAKRYFNAMLNEGVM-PTCH 258
Query: 453 IYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQAHDLLD 512
Y ++ F + K + F E + ++S D +I + +++A
Sbjct: 259 TYNIMIWGFFLSLKVETANRFF--EEMKERRISPDVVTYNTMINGYYRIKKMEEAEKFFV 316
Query: 513 EMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQK 572
EM + + Y +++K Y+ R + L + +S GI+ +A Y LL +
Sbjct: 317 EMKGRNIEPTVISYTTMIKGYVSVGRVDDGLRLFEEMKSFGIKPNAVTYSTLLPGLCDGE 376
Query: 573 DTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRIDCGVHD 632
A ++ KEM E I + F L+ + + A +L+ + I
Sbjct: 377 KMLEAQNVVKEMVERYIAPKDNSIFMRLITCQCKAGQLDAAADVLKAMIR-LSIPTEAGH 435
Query: 633 WNNVIHFFCKKRLMQDAEKALKRM 656
+ +I FCK + A K L ++
Sbjct: 436 YGVLIENFCKSGVYDRAVKLLDKL 459
>gi|15224753|ref|NP_179518.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|334184304|ref|NP_001189552.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218546774|sp|Q6NKW7.2|PP164_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g19280
gi|3135258|gb|AAC16458.1| putative salt-inducible protein [Arabidopsis thaliana]
gi|330251769|gb|AEC06863.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|330251770|gb|AEC06864.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 693
Score = 55.8 bits (133), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 51/250 (20%), Positives = 108/250 (43%), Gaps = 13/250 (5%)
Query: 447 LQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQ 506
L P Y ++ + G+T + + K S + + +I C G +
Sbjct: 404 LLPDCVCYTTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTI--LIGACSRFGSISD 461
Query: 507 AHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQ 566
A + M G++ Y +L+ Y + ++ +V L+ + RSAGI D + Y L+
Sbjct: 462 AESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIH 521
Query: 567 SKIVQKDTPGALHLFKEM-KESKIPRSGHQEFEMLVKGCAQN---HEAGLMAKLLQEVKE 622
S +V+ A + E+ + +P + F ++ G ++ EA ++ + ++
Sbjct: 522 SMVVRGYIDEANEIISELIRRGFVPST--LAFTDVIGGFSKRGDFQEAFILWFYMADL-- 577
Query: 623 GQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKY 682
R+ V + ++H +CK + M+ A ++ G P+ +++++ GY ++ G
Sbjct: 578 --RMKPDVVTCSALLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSV-GDI 634
Query: 683 TEVTELWGEM 692
+ EL G M
Sbjct: 635 EKACELIGLM 644
Score = 42.7 bits (99), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 59/263 (22%), Positives = 101/263 (38%), Gaps = 58/263 (22%)
Query: 502 GWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDAR----------- 550
G+L +A +L ++ L G+ S +S++ + + +P E L+ R
Sbjct: 320 GFLKEATSVLFKLKLFGISQDSVSVSSVIDGFCKVGKPEEAIKLIHSFRLRPNIFVYSSF 379
Query: 551 -----SAGIQLDAS----------------CYEALLQSKIVQKDTPGALHLFKEMKESKI 589
S G L AS CY ++ T A F + +S
Sbjct: 380 LSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGALLKSGN 439
Query: 590 PRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVK-EGQRIDCGVHDWNNVIHFFCKKRLMQD 648
P S +L+ C++ + + +K EG ++D V +NN++H + K +
Sbjct: 440 PPSLTTS-TILIGACSRFGSISDAESVFRNMKTEGLKLD--VVTYNNLMHGYGKTHQLNK 496
Query: 649 AEKALKRMRSLGHLPNAQTF----HSMVTGYAAIGGKYTEVTELWGEM--KSFASSTSMN 702
+ + MRS G P+ T+ HSMV + G E E+ E+ + F ST
Sbjct: 497 VFELIDEMRSAGISPDVATYNILIHSMV-----VRGYIDEANEIISELIRRGFVPST--- 548
Query: 703 FDEELLDSVLYTFVRGGFFARAN 725
+ +T V GGF R +
Sbjct: 549 --------LAFTDVIGGFSKRGD 563
>gi|410110071|gb|AFV61115.1| pentatricopeptide repeat-containing protein 123, partial [Aloysia
macrostachya]
Length = 437
Score = 55.8 bits (133), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 55/256 (21%), Positives = 114/256 (44%), Gaps = 30/256 (11%)
Query: 447 LQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQ---VSHDDAALGHVITLCISLGW 503
++P Y L++ + +A E H +++N+ V+++ + + TL
Sbjct: 183 IEPNVVSYNTLLRVYGDAELFGEAIHLFXLMQRKNIVQNVVTYNSMMMIYGKTL-----E 237
Query: 504 LDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEA 563
++A++L+ EM G+ +S Y++++ + + + L + RS+G+++D +
Sbjct: 238 HEKANNLIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEID----QV 293
Query: 564 LLQSKIVQKDTPG----ALHLFKEMKE-SKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQ 618
L Q+ IV + G A L E+K IPR ++ G + EA + + Q
Sbjct: 294 LYQTMIVAYERAGLVAHAKRLLHELKSPDNIPRDTAIH---ILAGAGRIEEATYVFR--Q 348
Query: 619 EVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAI 678
+ G+ D V + +IH F K + + + +MR LG+ P++ ++ Y +
Sbjct: 349 AIDAGEVKDIMV--FERMIHLFSKYKKYANVVEVFDKMRGLGYFPDSNVIALVLNAYGKL 406
Query: 679 ------GGKYTEVTEL 688
G Y E+ E+
Sbjct: 407 HEFDKANGVYMEMQEV 422
Score = 47.0 bits (110), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 63/315 (20%), Positives = 128/315 (40%), Gaps = 40/315 (12%)
Query: 447 LQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQ 506
L P Y L+ F + G +L K E++ +V D ++I L L +
Sbjct: 8 LSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQD--RVPGDLVLYSNLIELSRKLCDYSK 65
Query: 507 AHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQ 566
A + + +G Y +++ + +A RE +L+ + R+AG+ + + Y LL
Sbjct: 66 AISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVMPNTASYSTLLT 125
Query: 567 SKIVQKDTPGALHLFKEMKESK-------------------IPRSGHQEFEMLVK-GCAQ 606
+ K AL +F EM+E K + + + F + K G
Sbjct: 126 MYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEP 185
Query: 607 N-----------HEAGLMAKLLQEVKEGQR--IDCGVHDWNNVIHFFCKKRLMQDAEKAL 653
N +A L + + QR I V +N+++ + K + A +
Sbjct: 186 NVVSYNTLLRVYGDAELFGEAIHLFXLMQRKNIVQNVVTYNSMMMIYGKTLEHEKANNLI 245
Query: 654 KRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEMKSFASSTSMNFDEELLDSVLY 713
+ M++ G PN+ T+ ++++ + + GK L+ +++ S+ + D+ L +++
Sbjct: 246 QEMQNRGIEPNSITYSTIISIWGKV-GKLDRAAMLFQKLR----SSGVEIDQVLYQTMIV 300
Query: 714 TFVRGGFFARANEVV 728
+ R G A A ++
Sbjct: 301 AYERAGLVAHAKRLL 315
>gi|410110081|gb|AFV61120.1| pentatricopeptide repeat-containing protein 123, partial [Lantana
camara]
Length = 381
Score = 55.8 bits (133), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 52/255 (20%), Positives = 117/255 (45%), Gaps = 25/255 (9%)
Query: 447 LQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQ---VSHDDAALGHVITLCISLGW 503
++P Y L++ + +A E H +++N++ V+++ + + TL
Sbjct: 140 IEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMIMIYGKTL-----E 194
Query: 504 LDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEA 563
++A++L+ EM G+ +S Y++++ + + + L + RS+G+++D +
Sbjct: 195 HEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEID----QI 250
Query: 564 LLQSKIVQKDTPG----ALHLFKEMKE-SKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQ 618
L Q+ IV + G A L E+K IPR ++ G + EA + + Q
Sbjct: 251 LFQTMIVAYERAGLVAHAKRLLHELKRPDNIPRDTAIH---ILAGAGRIEEATYVFR--Q 305
Query: 619 EVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAI 678
+ G+ D V + +IH K + + + +MR LG+ P++ ++ Y +
Sbjct: 306 AIDAGEVKDITV--FERMIHLLSKYKKYSNVVEVFDKMRGLGYFPDSNVITVVLNAYGKL 363
Query: 679 GGKYTEVTELWGEMK 693
++ + +++ EM+
Sbjct: 364 -QEFDKANDVYMEMQ 377
Score = 46.2 bits (108), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 53/269 (19%), Positives = 113/269 (42%), Gaps = 38/269 (14%)
Query: 493 HVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSA 552
++I L L +A + + +G Y +++ + +A RE +L+ + ++A
Sbjct: 9 NLIELSRKLCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMKTA 68
Query: 553 GIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESK-------------------IPRSG 593
G+ + + Y LL + K AL +F EM+E K + +
Sbjct: 69 GVXPNTTSYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEA 128
Query: 594 HQEFEMLVK-GCAQN-----------HEAGLMAKLLQEVKEGQR--IDCGVHDWNNVIHF 639
+ F + K G N +A L + + + QR I+ V +N++I
Sbjct: 129 DKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMIMI 188
Query: 640 FCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEMKSFASST 699
+ K + A ++ M+S G PN+ T+ ++++ + + GK L+ +++ S+
Sbjct: 189 YGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKV-GKLDRAAMLFQKLR----SS 243
Query: 700 SMNFDEELLDSVLYTFVRGGFFARANEVV 728
+ D+ L +++ + R G A A ++
Sbjct: 244 GVEIDQILFQTMIVAYERAGLVAHAKRLL 272
>gi|410110065|gb|AFV61112.1| pentatricopeptide repeat-containing protein 123, partial [Aloysia
citrodora]
Length = 435
Score = 55.8 bits (133), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 42/179 (23%), Positives = 84/179 (46%), Gaps = 16/179 (8%)
Query: 505 DQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEAL 564
++A++L+ EM G+ +S Y++++ + + + L + RS+G+++D + L
Sbjct: 243 EKANNLIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEID----QVL 298
Query: 565 LQSKIVQKDTPG----ALHLFKEMKE-SKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQE 619
Q+ IV + G A L E+K IPR ++ G + EA + + Q
Sbjct: 299 YQTMIVAYERAGLVAHAKRLLHELKSPDNIPRDTAIH---ILAGAGRIEEATYVFR--QA 353
Query: 620 VKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAI 678
+ G+ D V + +IH F K + +A + +MR LG+ P++ ++ Y +
Sbjct: 354 IDAGEVKDITV--FERMIHLFSKYKKYANAVEVFDKMRGLGYFPDSNVIALVLNAYGKL 410
Score = 49.7 bits (117), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 63/315 (20%), Positives = 130/315 (41%), Gaps = 40/315 (12%)
Query: 447 LQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQ 506
L P Y L+ F + G +L K E++ +V D ++I L L +
Sbjct: 12 LSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQD--RVPGDLVLYSNLIELSRKLCDYSK 69
Query: 507 AHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQ 566
A + + +G Y +++ + +A RE AL+ + ++AG+ + + Y LL
Sbjct: 70 AISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARALISEMKTAGVMPNTASYSTLLT 129
Query: 567 SKIVQKDTPGALHLFKEMKESK-------------------IPRSGHQEFEMLVK-GCAQ 606
+ K AL +F EM+E K + + + F + K G
Sbjct: 130 MYVENKKFIEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIET 189
Query: 607 N-----------HEAGLMAKLLQEVKEGQR--IDCGVHDWNNVIHFFCKKRLMQDAEKAL 653
N +A L + + + QR I+ V +N+++ + K + A +
Sbjct: 190 NVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLI 249
Query: 654 KRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEMKSFASSTSMNFDEELLDSVLY 713
+ M++ G PN+ T+ ++++ + + GK L+ +++ S+ + D+ L +++
Sbjct: 250 QEMQNRGIEPNSITYSTIISIWGKV-GKLDRAAMLFQKLR----SSGVEIDQVLYQTMIV 304
Query: 714 TFVRGGFFARANEVV 728
+ R G A A ++
Sbjct: 305 AYERAGLVAHAKRLL 319
>gi|297849764|ref|XP_002892763.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297338605|gb|EFH69022.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 804
Score = 55.8 bits (133), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 68/287 (23%), Positives = 117/287 (40%), Gaps = 25/287 (8%)
Query: 429 LLGMLQKQVELIT--TEHGILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSH 486
L+G + + +EL + +HG+ +P Y LVK F G +I E +Q
Sbjct: 288 LVGSIAEALELASDMNKHGV-EPDSVTYNILVKGFHLLG--------MISGAGEVIQDML 338
Query: 487 DDAALGHVITLCI------SLGWLDQAHDLLDEMHLAGVRASSSV-YASLLKAYIEANRP 539
D VIT I LG +D LL +M G S + Y+ +L + R
Sbjct: 339 DKGLSPDVITYTILLCGQCQLGNIDMGLILLKDMLSRGFELKSIIPYSVMLSGLCKTGRV 398
Query: 540 REVTALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEM 599
E +L D + G+ D Y ++ A+ ++ EM +I + +
Sbjct: 399 DEALSLFYDLEAYGLTPDLVAYSIVIHGLCKLGKFDMAVRVYDEMCYKRILPNSRTLGAI 458
Query: 600 LVKGCAQNHEAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSL 659
++ C + + L + G +D + +N VI + K +++A + K
Sbjct: 459 MLGLCQKGMLLEARSLLDSLISSGDTLD--IILYNIVIDGYAKSGCIEEALELFKVAIES 516
Query: 660 GHLPNAQTFHSMVTGYA-----AIGGKYTEVTELWGEMKSFASSTSM 701
G PN TF+S++ GY A K +V +L+G + S S T++
Sbjct: 517 GITPNVATFNSLIYGYCKTQNIAEARKILDVIKLYGLVPSVVSYTTL 563
>gi|125527955|gb|EAY76069.1| hypothetical protein OsI_03997 [Oryza sativa Indica Group]
Length = 684
Score = 55.8 bits (133), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 57/249 (22%), Positives = 106/249 (42%), Gaps = 16/249 (6%)
Query: 431 GMLQKQVELI--TTEHGILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDD 488
GM+++ ++++ + HG T I ++ + G+ + FL + S D
Sbjct: 299 GMVERAIQVLEQMSGHGCAANTTLCNI-VINTICKQGRVDDAFQFL--NNMGSYGCSPDT 355
Query: 489 AALGHVIT-LCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLR 547
+ V+ LC + W D A +LL EM + + + + + + T L+
Sbjct: 356 ISYTTVLKGLCRAERWED-AKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIE 414
Query: 548 DARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQN 607
G +++ Y AL+ VQ AL LF M + + L+ G
Sbjct: 415 QMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSMP----CKPNTITYTTLLTGLCNA 470
Query: 608 HEAGLMAKLLQEVKEGQRIDCG--VHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNA 665
A+LL E+ + DC V +N ++ FFC+K LM +A + +++M G PN
Sbjct: 471 ERLDAAAELLAEMLQK---DCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNL 527
Query: 666 QTFHSMVTG 674
T+++++ G
Sbjct: 528 ITYNTLLDG 536
Score = 46.2 bits (108), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 59/300 (19%), Positives = 108/300 (36%), Gaps = 14/300 (4%)
Query: 449 PTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQAH 508
P + KL++ G+T + L AE+ V D A ++ G LD A
Sbjct: 76 PDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAV--DVFAYNTLVAGYCRYGQLDAAR 133
Query: 509 DLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSK 568
L+ M +A + Y +++ + R E +LL D G Q Y LL++
Sbjct: 134 RLIASMPVA---PDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQPSVVTYTVLLEAV 190
Query: 569 IVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKE-GQRID 627
A+ + EM+ +K + +++ G + + L + G + D
Sbjct: 191 CKSTGFGQAMEVLDEMR-AKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPD 249
Query: 628 CGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTE 687
+ V+ C + +D E+ M +PN TF M+ + GG +
Sbjct: 250 --TVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTF-DMLVRFFCRGGMVERAIQ 306
Query: 688 LWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFIDKYKYRTLF 747
+ +M + + L + V+ T + G A + + M D Y T+
Sbjct: 307 VLEQMSGHGCAANTT----LCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVL 362
>gi|356547370|ref|XP_003542086.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g65820-like [Glycine max]
Length = 628
Score = 55.8 bits (133), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 61/270 (22%), Positives = 113/270 (41%), Gaps = 13/270 (4%)
Query: 448 QPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQA 507
+P+ K + L+ + + GK E H L++ + ++ D +++ + A
Sbjct: 232 KPSVKHFTSLLYGWCKEGKLMEAKHVLVQMKDAGIEP--DIVVYNNLLGGYAQADKMGDA 289
Query: 508 HDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQS 567
+DLL EM G +++ Y L+++ + R E T + + + G Q D Y L+
Sbjct: 290 YDLLKEMRRKGCEPNATSYTVLIQSLCKHERLEEATRVFVEMQRNGCQADLVTYSTLISG 349
Query: 568 KIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQE-VKEGQRI 626
L EM + GH +++ + HE + +E V E Q+I
Sbjct: 350 FCKWGKIKRGYELLDEMIQQ-----GHFPNQVIYQHIMVAHEKKEELEECKELVNEMQKI 404
Query: 627 DCG--VHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTE 684
C + +N VI CK +++ + M S G P+ TF M+ G+ G E
Sbjct: 405 GCAPDLSIYNTVIRLACKLGEVKEGVRLWNEMESSGLSPSIDTFVIMINGFLEQGC-LVE 463
Query: 685 VTELWGEM--KSFASSTSMNFDEELLDSVL 712
E + EM + ++ +EL++S+L
Sbjct: 464 ACEYFKEMVGRGLFAAPQYGTLKELMNSLL 493
>gi|410110091|gb|AFV61125.1| pentatricopeptide repeat-containing protein 123, partial [Lantana
micrantha]
Length = 406
Score = 55.8 bits (133), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 52/255 (20%), Positives = 117/255 (45%), Gaps = 25/255 (9%)
Query: 447 LQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQ---VSHDDAALGHVITLCISLGW 503
++P Y L++ + +A E H +++N++ V+++ + + TL
Sbjct: 152 IEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMIMIYGKTL-----E 206
Query: 504 LDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEA 563
++A++L+ EM G+ +S Y++++ + + + L + RS+G+++D +
Sbjct: 207 HEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEID----QI 262
Query: 564 LLQSKIVQKDTPG----ALHLFKEMKE-SKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQ 618
L Q+ IV + G A L E+K IPR ++ G + EA + + Q
Sbjct: 263 LFQTMIVAYERAGLVAHAKRLLHELKRPDNIPRDTAIH---ILAGAGRIEEATYVFR--Q 317
Query: 619 EVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAI 678
+ G+ D V + +IH K + + + +MR LG+ P++ ++ Y +
Sbjct: 318 AIDAGEAKDITV--FERMIHLLSKYKKYSNVVEVFDKMRGLGYFPDSNVIAVVLNAYGKL 375
Query: 679 GGKYTEVTELWGEMK 693
++ + +++ EM+
Sbjct: 376 -QEFDKANDVYMEMQ 389
Score = 48.9 bits (115), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 57/282 (20%), Positives = 117/282 (41%), Gaps = 38/282 (13%)
Query: 480 ENLQVSHDDAALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRP 539
E QV D ++I L L +A + + +G Y +++ + +A
Sbjct: 8 EQDQVPGDLVLYSNLIELSRKLCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLF 67
Query: 540 REVTALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESK----------- 588
RE +L+ + ++AG+ + + Y LL + K AL +F EM+E K
Sbjct: 68 REARSLISEMKTAGVMPNTTSYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIM 127
Query: 589 --------IPRSGHQEFEMLVK-GCAQN-----------HEAGLMAKLLQEVKEGQR--I 626
+ + + F + K G N +A L + + + QR I
Sbjct: 128 IDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNI 187
Query: 627 DCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVT 686
+ V +N++I + K + A ++ M+S G PN+ T+ ++++ + + GK
Sbjct: 188 EQNVVTYNSMIMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKV-GKLDRAA 246
Query: 687 ELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVV 728
L+ +++ S+ + D+ L +++ + R G A A ++
Sbjct: 247 MLFQKLR----SSGVEIDQILFQTMIVAYERAGLVAHAKRLL 284
>gi|356499079|ref|XP_003518371.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g09680-like [Glycine max]
Length = 615
Score = 55.8 bits (133), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 64/268 (23%), Positives = 105/268 (39%), Gaps = 39/268 (14%)
Query: 447 LQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQ 506
L+PT + L+ ++G +E F +K E+ V D +I G LD+
Sbjct: 279 LRPTVVSFNTLISGCCKSGDVEE--GFRLKGVMESEGVCPDVFTFSALINGLCKEGRLDE 336
Query: 507 AHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQ 566
L DEM G+ + + +L+ + + + + G++ D Y AL+
Sbjct: 337 GSLLFDEMCGRGLVPNGVTFTTLIDGQCKGGKVDLALKNFQMMLAQGVRPDLVTYNALIN 396
Query: 567 SKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNH--EAGLMAKLLQEVKEGQ 624
D A L EM S + + F L+ GC ++ E+ L K + V+EG
Sbjct: 397 GLCKVGDLKEARRLVNEMTASGL-KPDKITFTTLIDGCCKDGDMESALEIKR-RMVEEGI 454
Query: 625 RID-----------CG---VHD-------------------WNNVIHFFCKKRLMQDAEK 651
+D C VHD + VI FCKK ++ K
Sbjct: 455 ELDDVAFTALISGLCREGRVHDAGRMLTDMLSAGFKPDDPTYTMVIDCFCKKGDVKMGFK 514
Query: 652 ALKRMRSLGHLPNAQTFHSMVTGYAAIG 679
LK M+S GH+P T+++++ G G
Sbjct: 515 LLKEMQSDGHVPGVVTYNALMNGLCKQG 542
Score = 52.4 bits (124), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 75/361 (20%), Positives = 147/361 (40%), Gaps = 42/361 (11%)
Query: 328 FYNCLLSCHLKFGDLNSASKMVLEMLQRAKEARNSLAAAMLPFNAVGVNNRTPSEQNVNC 387
F+N L+ K GD+ +A + E+ +R L ++ FN + C
Sbjct: 250 FFNVLMHGFCKAGDVGNARLVFDEIPKRG------LRPTVVSFNTL----------ISGC 293
Query: 388 TNSVDLENS----GIIENHILSYEDFTKDRKFVALEAEVKRVLQTLLGMLQKQVELITTE 443
S D+E G++E+ + + FT L E G L + L
Sbjct: 294 CKSGDVEEGFRLKGVMESEGVCPDVFTFSALINGLCKE---------GRLDEGSLLFDEM 344
Query: 444 HGI-LQPTEKIYIKLVKAFLEAGKT----KELTHFLIKAEKENLQVSHDDAALGHVITLC 498
G L P + L+ + GK K L + + +L V+++ G LC
Sbjct: 345 CGRGLVPNGVTFTTLIDGQCKGGKVDLALKNFQMMLAQGVRPDL-VTYNALING----LC 399
Query: 499 ISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDA 558
+G L +A L++EM +G++ + +L+ + + R GI+LD
Sbjct: 400 -KVGDLKEARRLVNEMTASGLKPDKITFTTLIDGCCKDGDMESALEIKRRMVEEGIELDD 458
Query: 559 SCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQ 618
+ AL+ + A + +M + + + M++ + + + KLL+
Sbjct: 459 VAFTALISGLCREGRVHDAGRMLTDMLSAGF-KPDDPTYTMVIDCFCKKGDVKMGFKLLK 517
Query: 619 EVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAI 678
E++ + GV +N +++ CK+ M++A+ L M ++G PN T++ ++ G++
Sbjct: 518 EMQSDGHVP-GVVTYNALMNGLCKQGQMKNAKMLLDAMLNVGVAPNDITYNILLDGHSKH 576
Query: 679 G 679
G
Sbjct: 577 G 577
>gi|357115347|ref|XP_003559450.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
chloroplastic-like [Brachypodium distachyon]
Length = 1102
Score = 55.8 bits (133), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 97/493 (19%), Positives = 202/493 (40%), Gaps = 43/493 (8%)
Query: 243 NAPLIAMKPNTNTFNIALAGCLLFETTRKAEQLLDIMPRIGVKADSNLLIIMAHIYERNG 302
N + P+ +++N AL G + + +A ++ M ++ + L I+ +
Sbjct: 626 NMTMKGCMPDLSSYNTALHGLVKEDRLTEAFRIFCQMKKVLAPDYTTLCTILPSFVKNGL 685
Query: 303 RREELRKLQRHIDEAVNLSDIQFRQFYNCLLSCHLK---------FGDLNSASKMVLE-- 351
E L L+ +I + + +D R ++ L+ LK F + + S+++L+
Sbjct: 686 MNEALHTLKEYILQPGSKAD---RSSFHSLMEGILKRAGMEKSIEFAENIALSRILLDDF 742
Query: 352 ----MLQRAKEARNSLAAAML--PFNAVGVNNRTPSEQNVNCT----NSVDLENSGIIEN 401
+++ +++ +L A L F ++GV+ +T S + C N +D+ E
Sbjct: 743 FLSPLIRHLCKSKKALEAHELVKKFESLGVSLKTGSYNALICGLVDENLIDVAEGLFSEM 802
Query: 402 HILSYE--DFTKDRKFVALEAEVKRVLQTLLGMLQKQVELITTEHGILQPTEKIYIKLVK 459
L + +FT + A+ ++ + ML+ Q E+ + + T Y ++
Sbjct: 803 KRLGCDPDEFTYNLILDAMGKSMR-----IEDMLKVQKEMHCKGY---ESTYVTYNTIIS 854
Query: 460 AFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQAHDLLDEMHLAGV 519
+++ E K E S G ++ + G ++ A DL DEM G
Sbjct: 855 GLVKSKMLYEAMDLYYKLMSEGF--SPTPCTYGPLLDGLLKDGKIEDAEDLFDEMLDYGC 912
Query: 520 RASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALH 579
+ + ++Y LL Y A +V L ++ GI D Y L+ + +L
Sbjct: 913 KPNRAIYNILLNGYRLAGNTEKVCELFQNMVDQGINPDIKSYTVLIGALCTAGRLNDSLS 972
Query: 580 LFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRIDCGVHDWNNVIHF 639
F+++ E + + +L+ G ++ L ++ E I ++ +N++I +
Sbjct: 973 YFRQLTELGL-EPDLITYNLLIHGLGRSGRLEEAVSLFNDM-EKSGIAPNLYTYNSLILY 1030
Query: 640 FCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEMKSFA--- 696
K+ +A K + + G PN T+++++ GY ++ G +G+M
Sbjct: 1031 LGKEGKAAEAGKMYEELLKNGWKPNVFTYNALIGGY-SVSGSTDNAFASYGQMIVGGCPP 1089
Query: 697 -SSTSMNFDEELL 708
SST M +LL
Sbjct: 1090 NSSTYMQLPNQLL 1102
>gi|410110085|gb|AFV61122.1| pentatricopeptide repeat-containing protein 123, partial [Lantana
fucata]
Length = 382
Score = 55.8 bits (133), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 53/255 (20%), Positives = 117/255 (45%), Gaps = 25/255 (9%)
Query: 447 LQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQ---VSHDDAALGHVITLCISLGW 503
++P Y L++ + +A E H +++N++ V+++ + + TL
Sbjct: 141 IEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTL-----E 195
Query: 504 LDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEA 563
++A++L+ EM G+ +S Y++++ + + + L + RS+GI++D +
Sbjct: 196 HEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGIEID----QI 251
Query: 564 LLQSKIVQKDTPG----ALHLFKEMKE-SKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQ 618
L Q+ IV + G A L E+K IPR ++ G + EA + + Q
Sbjct: 252 LFQTMIVAYERAGLVAHAKRLLHELKRPDNIPRDTAIH---ILAGAGRIEEATYVFR--Q 306
Query: 619 EVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAI 678
+ G+ D V + +IH K + + + +MR LG+ P++ ++ Y +
Sbjct: 307 AIDAGEVKDITV--FERMIHLLSKYKKYSNVVEVFDKMRGLGYFPDSDVIAIVLNAYGKL 364
Query: 679 GGKYTEVTELWGEMK 693
++ + +++ EM+
Sbjct: 365 -QEFDKANDVYMEMQ 378
Score = 44.7 bits (104), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 54/278 (19%), Positives = 115/278 (41%), Gaps = 38/278 (13%)
Query: 484 VSHDDAALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVT 543
V D ++I L L +A + + +G Y +++ + +A RE
Sbjct: 1 VPGDLVLYSNLIELSRKLCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREAR 60
Query: 544 ALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESK--------------- 588
+L+ + ++AG+ + + Y LL + K AL +F EM+E K
Sbjct: 61 SLIGEMKAAGVMPNTTSYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVY 120
Query: 589 ----IPRSGHQEFEMLVK-GCAQN-----------HEAGLMAKLLQEVKEGQR--IDCGV 630
+ + + F + K G N +A L + + + QR I+ V
Sbjct: 121 GQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNV 180
Query: 631 HDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWG 690
+N+++ + K + A ++ M+S G PN+ T+ ++++ + + GK L+
Sbjct: 181 VTYNSMMMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKV-GKLDRAAMLFQ 239
Query: 691 EMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVV 728
+++ S+ + D+ L +++ + R G A A ++
Sbjct: 240 KLR----SSGIEIDQILFQTMIVAYERAGLVAHAKRLL 273
>gi|346703736|emb|CBX24404.1| hypothetical_protein [Oryza glaberrima]
Length = 1765
Score = 55.8 bits (133), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 53/235 (22%), Positives = 99/235 (42%), Gaps = 10/235 (4%)
Query: 448 QPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENL---QVSHDDAALGHVITLCISLGWL 504
P + L+ G ++ HFL +A + L Q+S+ G C+ G L
Sbjct: 1284 DPDIITFNTLITGLCHEGHVRKAEHFLREAIRRELNPNQLSYTPLIHG----FCMR-GEL 1338
Query: 505 DQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEAL 564
A DLL EM G + +L+ + A + E + + D + Y L
Sbjct: 1339 MVASDLLVEMMGRGHTPDVVTFGALIHGLVVAGKVSEALIVREKMTERQVFPDVNIYNVL 1398
Query: 565 LQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQ 624
+ ++ P A ++ +EM E + + + L+ G ++ G K+ E E +
Sbjct: 1399 ISGLCKKRMLPAAKNILEEMLEKNV-QPDEFVYATLIDGFIRSENLGDARKIF-EFMEHK 1456
Query: 625 RIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIG 679
I + N +I +C+ +M +A + MR +G +P+ T+ ++++GYA G
Sbjct: 1457 GICPDIVSCNAMIKGYCQFGMMSEAILCMSNMRKVGCIPDEFTYTTVISGYAKQG 1511
Score = 40.0 bits (92), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 89/213 (41%), Gaps = 12/213 (5%)
Query: 504 LDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSA-GIQLDASCYE 562
D D L M LAG + + +L+ AY +A + T + R G + +
Sbjct: 1057 FDAVDDTLQSMSLAGAAPTRACLGALVAAYADAGMLGKATKMCERVREQYGSLPEVTHCN 1116
Query: 563 ALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFE--MLVKG-CAQNH-EAGLMAKLLQ 618
LL+ + Q+ A L+ EM SG + +LV+G C + E GL L
Sbjct: 1117 RLLKLLVEQRRWDDARKLYDEMLGKD---SGADNYSTCVLVRGLCLERRVEEGLK---LI 1170
Query: 619 EVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAI 678
E + G V +N +I +C++ M L M + G LP T+ S++ +
Sbjct: 1171 EARWGAGCIPHVVFYNVLIDGYCRRGDMGRGLLLLGEMETKGFLPTLVTYGSLIN-WLGK 1229
Query: 679 GGKYTEVTELWGEMKSFASSTSMNFDEELLDSV 711
G ++ L+ EM+ S ++ ++D++
Sbjct: 1230 KGDLEKIGSLFLEMRKRGFSPNVQIYNSVIDAL 1262
>gi|297832604|ref|XP_002884184.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330024|gb|EFH60443.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 829
Score = 55.8 bits (133), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 48/232 (20%), Positives = 97/232 (41%), Gaps = 9/232 (3%)
Query: 502 GWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCY 561
G +A +L EM A S Y L+ AY A +E ++ G+ +A Y
Sbjct: 337 GVYTEALSVLKEMEENNCPADSVTYNELVAAYARAGFSKEAAVVIEMMTQKGVMPNAITY 396
Query: 562 EALLQSKIVQKDTPGALHLFKEMKESK-IPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEV 620
++ + AL LF MKE+ +P + + ++ + + M K+L ++
Sbjct: 397 TTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTC--TYNAVLSMLGKKSRSNEMIKMLCDM 454
Query: 621 KEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGG 680
K WN ++ K + + + + M+S G P+ TF+++++ Y G
Sbjct: 455 KSNGCFP-NRATWNTILALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGS 513
Query: 681 KYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMME 732
+ + ++++GEM + N +++L R G + V++ M+
Sbjct: 514 E-VDASKMYGEM----TRAGFNACVTTYNALLNALARKGDWRSGENVISDMK 560
Score = 47.8 bits (112), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 59/125 (47%), Gaps = 11/125 (8%)
Query: 633 WNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEM 692
+N VI FC+K LMQ+A + L M G P T+++ V+GY A+G ++GE+
Sbjct: 711 YNTVIKGFCRKGLMQEAVRMLSEMTERGIRPCIFTYNTFVSGYTAMG--------MYGEI 762
Query: 693 KSFASSTSMNF---DEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFIDKYKYRTLFLK 749
+ + N +E V+ + R G ++ A + V+ ++ D + L L+
Sbjct: 763 EDVIECMAKNDCRPNELTFKMVVDGYCRAGKYSEAMDFVSKIKTFDPCFDDQSIQRLALR 822
Query: 750 YHKTL 754
+ L
Sbjct: 823 VRENL 827
Score = 43.5 bits (101), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 37/181 (20%), Positives = 79/181 (43%), Gaps = 9/181 (4%)
Query: 518 GVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQKDTPGA 577
G + ++ S+L + N + +L+ G+ D Y +L+ + + + A
Sbjct: 633 GYKPDMVIFNSMLSIFTRNNMYDQAEGILQSIHEDGLNPDLVTYNSLMDMYVRRGECWKA 692
Query: 578 LHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLM---AKLLQEVKEGQRIDCGVHDWN 634
+ K +++S++ + + ++KG + GLM ++L E+ E C + +N
Sbjct: 693 EEILKTLEKSQL-KPDLVSYNTVIKGFCRK---GLMQEAVRMLSEMTERGIRPC-IFTYN 747
Query: 635 NVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEMKS 694
+ + + + E ++ M PN TF +V GY GKY+E + ++K+
Sbjct: 748 TFVSGYTAMGMYGEIEDVIECMAKNDCRPNELTFKMVVDGYCR-AGKYSEAMDFVSKIKT 806
Query: 695 F 695
F
Sbjct: 807 F 807
Score = 43.5 bits (101), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 50/258 (19%), Positives = 109/258 (42%), Gaps = 7/258 (2%)
Query: 489 AALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRD 548
A ++ LC + G + + EM G + +L+ AY + + + +
Sbjct: 464 ATWNTILALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGSEVDASKMYGE 523
Query: 549 ARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNH 608
AG + Y ALL + + D ++ +MK SK + + ++++ A+
Sbjct: 524 MTRAGFNACVTTYNALLNALARKGDWRSGENVISDMK-SKGFKPTETSYSLMLQCYAKGG 582
Query: 609 EAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTF 668
+ ++ + + EGQ + ++ F K R + +E+A + G+ P+ F
Sbjct: 583 NYLGIERIEEGINEGQIFPSWMLLRTLLLANF-KCRALAGSERAFTLFKKHGYKPDMVIF 641
Query: 669 HSMVTGYAAIGGKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVV 728
+SM++ I + + G ++S +N D +S++ +VR G +A E++
Sbjct: 642 NSMLS----IFTRNNMYDQAEGILQSIHED-GLNPDLVTYNSLMDMYVRRGECWKAEEIL 696
Query: 729 AMMEEGKMFIDKYKYRTL 746
+E+ ++ D Y T+
Sbjct: 697 KTLEKSQLKPDLVSYNTV 714
Score = 42.4 bits (98), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 30/136 (22%), Positives = 60/136 (44%), Gaps = 5/136 (3%)
Query: 594 HQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKAL 653
H E+LV+ + + + AKLL ++ Q V + ++H + + + A
Sbjct: 182 HHVIEILVRILGRESQYSVAAKLLDKIPL-QDYMLDVRAYTTILHAYSRTGKYEKAINLF 240
Query: 654 KRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEMKSFASSTSMNFDEELLDSVLY 713
+RM+ +G P T++ ++ + +G + ++ + EM+ S + FDE +VL
Sbjct: 241 ERMKEMGPSPTLVTYNVILDVFGKMGRSWRKILGVLEEMR----SKGLKFDEFTCSTVLS 296
Query: 714 TFVRGGFFARANEVVA 729
R G A + A
Sbjct: 297 ACAREGLLREAKDFFA 312
>gi|125537408|gb|EAY83896.1| hypothetical protein OsI_39118 [Oryza sativa Indica Group]
Length = 693
Score = 55.8 bits (133), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 47/226 (20%), Positives = 94/226 (41%), Gaps = 3/226 (1%)
Query: 454 YIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQAHDLLDE 513
+ +L+ ++ AGK + L +K+ + D + + + + G +D+A + +
Sbjct: 132 FAQLMLSYSRAGKLRSAMRVLHLMQKDG--CAPDISICNMAVNVLVVAGRVDKALEFAER 189
Query: 514 MHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQKD 573
M GV Y L+K A R + ++ G D Y ++ +K
Sbjct: 190 MRRVGVEPDVYTYNCLIKGLCGARRVVDAMEMIGVMLQNGCPPDKISYYTVMSFLCKEKR 249
Query: 574 TPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRIDCGVHDW 633
L + M+ + +L+ G A++ A + L+E EG+R +
Sbjct: 250 VEEVRGLLQRMRNDAGLFPDQVTYNVLIHGLAKHGHADEALEFLRE-SEGKRFRVDEVGY 308
Query: 634 NNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIG 679
+ ++H FC M +A++ + M S G P+ T+ ++V G+ IG
Sbjct: 309 SAIVHSFCLNGRMAEAKEIVGEMISKGCQPDVVTYSTVVDGFCRIG 354
Score = 42.4 bits (98), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 49/223 (21%), Positives = 88/223 (39%), Gaps = 10/223 (4%)
Query: 526 YASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMK 585
+A L+ +Y A + R +L + G D S + +V AL + M+
Sbjct: 132 FAQLMLSYSRAGKLRSAMRVLHLMQKDGCAPDISICNMAVNVLVVAGRVDKALEFAERMR 191
Query: 586 ESKIPRSGHQEFEMLVKG-CAQNHEAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKR 644
+ + + L+KG C M + ++ G D + V+ F CK++
Sbjct: 192 RVGVEPDVYT-YNCLIKGLCGARRVVDAMEMIGVMLQNGCPPD--KISYYTVMSFLCKEK 248
Query: 645 LMQDAEKALKRMRS-LGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEMKSFASSTSMNF 703
+++ L+RMR+ G P+ T++ ++ G A G E E E +
Sbjct: 249 RVEEVRGLLQRMRNDAGLFPDQVTYNVLIHGLAK-HGHADEALEFLRE----SEGKRFRV 303
Query: 704 DEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFIDKYKYRTL 746
DE +++++F G A A E+V M D Y T+
Sbjct: 304 DEVGYSAIVHSFCLNGRMAEAKEIVGEMISKGCQPDVVTYSTV 346
>gi|410110093|gb|AFV61126.1| pentatricopeptide repeat-containing protein 123, partial [Lantana
microcephala]
Length = 440
Score = 55.8 bits (133), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 53/255 (20%), Positives = 117/255 (45%), Gaps = 25/255 (9%)
Query: 447 LQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQ---VSHDDAALGHVITLCISLGW 503
++P Y L++ + +A E H +++N++ V+++ + + TL
Sbjct: 186 IEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTL-----E 240
Query: 504 LDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEA 563
++A++L+ EM G+ +S Y++++ + + + L + RS+GI++D +
Sbjct: 241 HEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGIEID----QI 296
Query: 564 LLQSKIVQKDTPG----ALHLFKEMKE-SKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQ 618
L Q+ IV + G A L E+K IPR ++ G + EA + + Q
Sbjct: 297 LFQTMIVAYERAGLVAHAKRLLHELKRPDNIPRDTAIH---ILAGAGRIEEATYVFR--Q 351
Query: 619 EVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAI 678
+ G+ D V + +IH K + + + +MR LG+ P++ ++ Y +
Sbjct: 352 AIDAGEVKDITV--FERMIHLLSKYKKYSNVVEVFDKMRGLGYFPDSDVIAIVLNAYGKL 409
Query: 679 GGKYTEVTELWGEMK 693
++ + +++ EM+
Sbjct: 410 -QEFDKANDVYMEMQ 423
Score = 49.7 bits (117), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 63/315 (20%), Positives = 130/315 (41%), Gaps = 40/315 (12%)
Query: 447 LQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQ 506
L P Y L+ F + G +L K E++ +V D ++I L L +
Sbjct: 11 LSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQD--RVPGDLVLYSNLIELSRKLCDYSK 68
Query: 507 AHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQ 566
A + + +G Y +++ + +A RE +L+ + ++AG+ + + Y LL
Sbjct: 69 AISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLIGEMKAAGVMPNTASYSTLLT 128
Query: 567 SKIVQKDTPGALHLFKEMKESK-------------------IPRSGHQEFEMLVK-GCAQ 606
+ K AL +F EM+E K + + + F + K G
Sbjct: 129 MYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEP 188
Query: 607 N-----------HEAGLMAKLLQEVKEGQR--IDCGVHDWNNVIHFFCKKRLMQDAEKAL 653
N +A L + + + QR I+ V +N+++ + K + A +
Sbjct: 189 NVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLI 248
Query: 654 KRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEMKSFASSTSMNFDEELLDSVLY 713
+ M+S G PN+ T+ ++++ + + GK L+ +++ S+ + D+ L +++
Sbjct: 249 QEMQSRGIEPNSITYSTIISIWGKV-GKLDRAAMLFQKLR----SSGIEIDQILFQTMIV 303
Query: 714 TFVRGGFFARANEVV 728
+ R G A A ++
Sbjct: 304 AYERAGLVAHAKRLL 318
>gi|255661162|gb|ACU25750.1| pentatricopeptide repeat-containing protein [Glandularia flava]
Length = 426
Score = 55.8 bits (133), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 50/252 (19%), Positives = 120/252 (47%), Gaps = 19/252 (7%)
Query: 447 LQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQ---VSHDDAALGHVITLCISLGW 503
++P Y L++ + +A E H +++N++ V+++ + + TL
Sbjct: 180 IEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTL-----E 234
Query: 504 LDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEA 563
++A++L+ EM G+ +S Y++++ + + + L + RS+G+ +D +
Sbjct: 235 HEKANNLIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVDID----QV 290
Query: 564 LLQSKIVQKDTPGAL-HLFKEMKESKIPRSGHQEFEM-LVKGCAQNHEAGLMAKLLQEVK 621
L Q+ IV + G + H + + E K P + ++ + ++ G + EA + + Q +
Sbjct: 291 LYQTMIVAYERAGLVAHAKRLLHELKRPDNIPRDIAIHILAGAGRXEEATWVFR--QAID 348
Query: 622 EGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGK 681
G+ D V + +IH F K + + + +MR LG+ P++ ++ Y + +
Sbjct: 349 AGEVKDITV--FERMIHLFSKYKKYGNVVEVFDKMRGLGYFPDSNVIALVLNAYGKL-HE 405
Query: 682 YTEVTELWGEMK 693
+ + +++ EM+
Sbjct: 406 FDKANDVYMEMQ 417
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 63/315 (20%), Positives = 131/315 (41%), Gaps = 40/315 (12%)
Query: 447 LQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQ 506
L P Y L+ F + G +L K E++ +V D ++I L L +
Sbjct: 5 LSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQD--RVPGDLVLYSNLIELSRKLCDYSK 62
Query: 507 AHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQ 566
A + + +G Y +++ + +A RE +L+ + R+AG+ + + Y LL
Sbjct: 63 AISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVTPNTASYSTLLT 122
Query: 567 SKIVQKDTPGALHLFKEMKESK-------------------IPRSGHQEFEMLVK-GCAQ 606
+ K AL +F EM+E K + + + F + K G
Sbjct: 123 MYVENKKFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEP 182
Query: 607 N-----------HEAGLMAKLLQEVKEGQR--IDCGVHDWNNVIHFFCKKRLMQDAEKAL 653
N +A L + + + QR I+ V +N+++ + K + A +
Sbjct: 183 NVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLI 242
Query: 654 KRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEMKSFASSTSMNFDEELLDSVLY 713
+ M++ G PN+ T+ ++++ + + GK L+ +++ S+ ++ D+ L +++
Sbjct: 243 QEMQNRGIEPNSITYSTIISIWGKV-GKLDRAAMLFQKLR----SSGVDIDQVLYQTMIV 297
Query: 714 TFVRGGFFARANEVV 728
+ R G A A ++
Sbjct: 298 AYERAGLVAHAKRLL 312
>gi|356577949|ref|XP_003557083.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16390,
chloroplastic-like [Glycine max]
Length = 700
Score = 55.8 bits (133), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 54/253 (21%), Positives = 102/253 (40%), Gaps = 4/253 (1%)
Query: 425 VLQTLLGMLQKQVELITTEHGI-LQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQ 483
T++ K VEL G +P +V A+ + + +A E
Sbjct: 209 TFSTMVNCANKPVELFEKMSGFGYEPDGITCSAMVYAYALSNNVDKAVSLYDRAIAEKWC 268
Query: 484 VSHDDAALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVT 543
+ D A +I + G D+ + EM + G + + Y +LL A ++A + R+
Sbjct: 269 L--DAATFSALIKMYSMAGNYDKCLKVYQEMKVLGAKPNVVTYNTLLGAMLKAQKHRQAK 326
Query: 544 ALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKG 603
A+ ++ +S G+ D Y LL+ + + AL ++KEMK + + + + L+
Sbjct: 327 AIYKEMKSNGVSPDFITYACLLEVYTIAHCSEEALGVYKEMKGNGMDMTADL-YNKLLAM 385
Query: 604 CAQNHEAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLP 663
CA A++ E+K ++++I + + + +AE L M G P
Sbjct: 386 CADVGYTDRAAEIFYEMKSSGTCQPDSWTFSSMITMYSRSGKVSEAEGMLNEMIQSGFQP 445
Query: 664 NAQTFHSMVTGYA 676
S+V Y
Sbjct: 446 TIFVLTSLVHCYG 458
>gi|225443015|ref|XP_002267278.1| PREDICTED: pentatricopeptide repeat-containing protein At1g52640,
mitochondrial-like [Vitis vinifera]
Length = 624
Score = 55.8 bits (133), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 46/197 (23%), Positives = 83/197 (42%), Gaps = 8/197 (4%)
Query: 502 GWLD-----QAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQL 556
GW D +A L +EM G Y SLL+A + E L R+ S G+
Sbjct: 228 GWGDVGDSSEARKLFEEMRERGCAVDVVAYNSLLEALCKGGNVDEAYKLFREMGSNGLAP 287
Query: 557 DASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKL 616
DA Y +++ D A + M+ + + + +VK ++ + +L
Sbjct: 288 DACSYSIFIRAYCEVNDIHSAFQVLDRMRRYNLVPNVFT-YNCIVKKLCKSEKVDEAYQL 346
Query: 617 LQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYA 676
L E+ E + + + +N + F C + A + + RM +P+ T+ +MV
Sbjct: 347 LDEMIE-RGVSPDLWSYNAIQAFHCDHCEVNKALRLISRMEKENCMPDRHTY-NMVLKML 404
Query: 677 AIGGKYTEVTELWGEMK 693
G++ VT++WG M+
Sbjct: 405 LRVGRFDRVTDVWGGME 421
Score = 42.0 bits (97), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 32/155 (20%), Positives = 68/155 (43%), Gaps = 5/155 (3%)
Query: 525 VYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEM 584
++ + +AY AN P + G++ + LL +K A F ++
Sbjct: 152 IFWLIFRAYCRANLPGDAIRAFHQMGDFGVKAGVGDVDQLLYVLCKRKHVKQAQEFFDKV 211
Query: 585 KESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKE-GQRIDCGVHDWNNVIHFFCKK 643
+P + + + +L++G ++ KL +E++E G +D V +N+++ CK
Sbjct: 212 NVEVMPNA--KTYSILMRGWGDVGDSSEARKLFEEMRERGCAVD--VVAYNSLLEALCKG 267
Query: 644 RLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAI 678
+ +A K + M S G P+A ++ + Y +
Sbjct: 268 GNVDEAYKLFREMGSNGLAPDACSYSIFIRAYCEV 302
>gi|152717462|dbj|BAF73723.1| pentatricopeptide repeat protein [Raphanus sativus]
Length = 687
Score = 55.8 bits (133), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 87/199 (43%), Gaps = 12/199 (6%)
Query: 504 LDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEA 563
+D +LL EM G+ A ++ Y +L+ + LL++ S+G+ D +
Sbjct: 411 IDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDT 470
Query: 564 LLQSKIVQKDTPGALHLFKEMKESKI------PRSG----HQEFEMLVKGCAQNHEAGLM 613
LL AL +FK M++SK P +G Q + +L+ G N L
Sbjct: 471 LLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLI-NEGKFLE 529
Query: 614 AKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVT 673
A+ L E + I ++++I CK+ + +A + M S PN TF +++
Sbjct: 530 AEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLIN 589
Query: 674 GYAAIGGKYTEVTELWGEM 692
GY G+ + EL+ EM
Sbjct: 590 GYCK-AGRVDDGLELFCEM 607
Score = 49.7 bits (117), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 44/196 (22%), Positives = 82/196 (41%), Gaps = 3/196 (1%)
Query: 497 LCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQL 556
LC+ + +A +L +M R + + +L+ R E ALL G+Q
Sbjct: 159 LCVE-DRVSEALNLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQP 217
Query: 557 DASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKL 616
Y ++ DT AL L ++M+E + ++ ++ L
Sbjct: 218 TQITYGTIVDGMCKIGDTVSALDLLRKMEEISHIIPNVVIYSAIIDSLCKDGRHSDAQNL 277
Query: 617 LQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYA 676
E++E + I + +N++I FC DAE+ L+ M P+ T+++++ +
Sbjct: 278 FTEMQE-KGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFV 336
Query: 677 AIGGKYTEVTELWGEM 692
GK+ E EL+ EM
Sbjct: 337 K-EGKFFEAEELYDEM 351
Score = 48.5 bits (114), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 58/259 (22%), Positives = 96/259 (37%), Gaps = 42/259 (16%)
Query: 447 LQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQ 506
LQPT+ Y +V + G T L K E+ + + + + +LC G
Sbjct: 215 LQPTQITYGTIVDGMCKIGDTVSALDLLRKMEEISHIIPNVVIYSAIIDSLCKD-GRHSD 273
Query: 507 AHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQ 566
A +L EM G+ Y S++ + + R + LL++ I D Y AL+
Sbjct: 274 AQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALIN 333
Query: 567 SKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRI 626
+ + KE K + EML +G N
Sbjct: 334 AFV---------------KEGKFFEAEELYDEMLPRGIIPN------------------- 359
Query: 627 DCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVT 686
++++I FCK+ + AE M + G PN TF++++ GY + +
Sbjct: 360 ---TITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCG-AKRIDDGM 415
Query: 687 ELWGEMKS---FASSTSMN 702
EL EM A +T+ N
Sbjct: 416 ELLHEMTETGLVADTTTYN 434
Score = 43.9 bits (102), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 63/303 (20%), Positives = 113/303 (37%), Gaps = 47/303 (15%)
Query: 491 LGHVITLCISLGWL------DQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTA 544
L V+ C +G + D L +M +R + L+K + ++ +
Sbjct: 76 LPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFTILIKCFCSCSKLPFALS 135
Query: 545 LLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKG- 603
G+ D + LL V+ AL+LF +M E+ R F L+ G
Sbjct: 136 TFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMFETTC-RPNVVTFTTLMNGL 194
Query: 604 CAQNH------------EAGL-------------MAK---------LLQEVKEGQRIDCG 629
C + E GL M K LL++++E I
Sbjct: 195 CREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKIGDTVSALDLLRKMEEISHIIPN 254
Query: 630 VHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELW 689
V ++ +I CK DA+ M+ G P+ T++SM+ G+ + G++++ +L
Sbjct: 255 VVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCS-SGRWSDAEQLL 313
Query: 690 GEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFIDKYKYRTLFLK 749
EM S D ++++ FV+ G F A E+ M + + Y ++
Sbjct: 314 QEMLERKISP----DVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDG 369
Query: 750 YHK 752
+ K
Sbjct: 370 FCK 372
>gi|302820365|ref|XP_002991850.1| hypothetical protein SELMODRAFT_134282 [Selaginella moellendorffii]
gi|300140388|gb|EFJ07112.1| hypothetical protein SELMODRAFT_134282 [Selaginella moellendorffii]
Length = 425
Score = 55.8 bits (133), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 69/334 (20%), Positives = 130/334 (38%), Gaps = 49/334 (14%)
Query: 443 EHGILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLG 502
+HG +P Y ++++ ++AG L K K L+ D L +V+ LG
Sbjct: 42 KHGS-KPNAYTYKCVIQSLVKAGNVVLAMELLDKMIKTGLE---PDTLLCNVVL--DGLG 95
Query: 503 ---WLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDAS 559
+D+A L M G A YA L+++ R E T L + G A
Sbjct: 96 KANMMDEACKLFASMKSMGCPADDYTYAILIRSLGRCKRDEEATLLFDEMEERGCTPSAP 155
Query: 560 CYEALLQSKIVQKDTPGALHLFKEMKE--------------SKIPRSGHQE--------- 596
Y ++ A+ + K+M + + + R+G E
Sbjct: 156 AYTNVIDIYCKAGRIESAMVVLKKMLDKNLAPDDYTLNSLITAVSRTGRTELACEIFERM 215
Query: 597 -----------FEMLVKGCAQNHEAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRL 645
F ++ C + + GL + + E+ E + I +N +I+ + +
Sbjct: 216 KKSGVAVNTVSFNAMLDCCGKAGKVGLAYQFMDEM-EARGIKPNSITFNTLINCLGRAKY 274
Query: 646 MQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEMKSFASSTSMNFDE 705
+A K L+ MRS G P+ T+ M+ +A G + E++G+M+ S ++
Sbjct: 275 ASEAYKVLQEMRSAGLTPDVFTYTCMIEAFAK-AGNMGKAFEMFGDMEKAGCSANVVTYN 333
Query: 706 ELLDSVLYTFVRGGFFARANEVVAMMEEGKMFID 739
L+D+ V+ G + A ++ M++ + D
Sbjct: 334 LLIDA----LVKAGRYQDARDIYFDMKKKGILPD 363
>gi|297741611|emb|CBI32743.3| unnamed protein product [Vitis vinifera]
Length = 772
Score = 55.8 bits (133), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 46/211 (21%), Positives = 96/211 (45%), Gaps = 3/211 (1%)
Query: 486 HDDAALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTAL 545
HD +I + L+ A +L +M GV ++ L+ +Y +A +E +
Sbjct: 150 HDRDTHLKIIEILGRASKLNHARCILLDMPKKGVEWDEDLFVLLIDSYGKAGIVQESVKV 209
Query: 546 LRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCA 605
+ + G++ Y+AL + + + A F M + + H + +++ G
Sbjct: 210 FQKMKELGVERTIKSYDALFKVILRRGRYMMAKRYFNAMLNEGVMPTCHT-YNIMIWGFF 268
Query: 606 QNHEAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNA 665
+ + + +E+KE +RI V +N +I+ + + + M++AEK M+ P
Sbjct: 269 LSLKVETANRFFEEMKE-RRISPDVVTYNTMINGYYRIKKMEEAEKFFVEMKGRNIEPTV 327
Query: 666 QTFHSMVTGYAAIGGKYTEVTELWGEMKSFA 696
++ +M+ GY ++ G+ + L+ EMKSF
Sbjct: 328 ISYTTMIKGYVSV-GRVDDGLRLFEEMKSFG 357
Score = 40.8 bits (94), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 52/264 (19%), Positives = 106/264 (40%), Gaps = 7/264 (2%)
Query: 396 SGIIENHILSYEDFTK---DRKFVALEAEVKRVLQTLLGMLQKQVELITTEHGILQPTEK 452
+GI++ + ++ + +R + +A K +L+ M+ K+ G++ PT
Sbjct: 200 AGIVQESVKVFQKMKELGVERTIKSYDALFKVILRRGRYMMAKRYFNAMLNEGVM-PTCH 258
Query: 453 IYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQAHDLLD 512
Y ++ F + K + F E + ++S D +I + +++A
Sbjct: 259 TYNIMIWGFFLSLKVETANRFF--EEMKERRISPDVVTYNTMINGYYRIKKMEEAEKFFV 316
Query: 513 EMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQK 572
EM + + Y +++K Y+ R + L + +S GI+ +A Y LL +
Sbjct: 317 EMKGRNIEPTVISYTTMIKGYVSVGRVDDGLRLFEEMKSFGIKPNAVTYSTLLPGLCDGE 376
Query: 573 DTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRIDCGVHD 632
A ++ KEM E I + F L+ + + A +L+ + I
Sbjct: 377 KMLEAQNVVKEMVERYIAPKDNSIFMRLITCQCKAGQLDAAADVLKAMIR-LSIPTEAGH 435
Query: 633 WNNVIHFFCKKRLMQDAEKALKRM 656
+ +I FCK + A K L ++
Sbjct: 436 YGVLIENFCKSGVYDRAVKLLDKL 459
>gi|168052832|ref|XP_001778843.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162669712|gb|EDQ56293.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 953
Score = 55.8 bits (133), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 58/117 (49%)
Query: 473 FLIKAEKENLQVSHDDAALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKA 532
F +KA L V +I+ C+ +G L++A L EM GV A++ Y L++
Sbjct: 517 FEMKAAMLRLGVQPTVVTYNSLISACVKIGDLERACSLFPEMKELGVEANTHCYNPLIQG 576
Query: 533 YIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKI 589
+ R A++R +AG++ D + Y L+ + + KD A LF EM+E +I
Sbjct: 577 FAMQGRFDRALAVMRSMDAAGVKPDVNTYRLLIFACSLSKDQDKADQLFAEMQEREI 633
Score = 48.9 bits (115), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 80/382 (20%), Positives = 152/382 (39%), Gaps = 43/382 (11%)
Query: 247 IAMKPNTNTFNIALAGCLLFETTRKAEQLLDIMPRIGVKADSNLLIIMAHIYERNGRREE 306
+ ++P T+N ++ C+ +A L M +GV+A+++ + + GR +
Sbjct: 526 LGVQPTVVTYNSLISACVKIGDLERACSLFPEMKELGVEANTHCYNPLIQGFAMQGRFDR 585
Query: 307 LRKLQRHIDEAVNLSDIQFRQFYNCLLSCHLKFGDLNSASKMVLEMLQRAKEARNSLAAA 366
+ R +D A D+ + + +C L D + A ++ EM +R S+
Sbjct: 586 ALAVMRSMDAAGVKPDVN--TYRLLIFACSLS-KDQDKADQLFAEMQEREIRPDESIYTV 642
Query: 367 M-LPFNAVGVNNR----------TPSEQNVNCTNSV--DLENSGIIENHILSYEDFTKDR 413
M + ++ G +R + + +++ L +G +E + Y F ++R
Sbjct: 643 MIIVYSKCGNVDRGIEMIRSLEKSGETAGIEAKSAILHGLAVTGRLEEALALYAVFKRER 702
Query: 414 KFVALEAEVKRVLQTL--LGMLQKQVELITTEHG--------ILQPTEKIYIKLVKAFLE 463
+ V +L L +G L K EL G + Q E + I+ + + L
Sbjct: 703 -LLPHSYAVGTLLAALGKVGDLDKMFELFEDARGDGKWPFMNLRQRAEHLNIRCINSVLA 761
Query: 464 AGKTKEL---THFLIKAEKENLQVSHDDAALGHVITLCISLG--------WLDQAHDLL- 511
+ +L FL K ++E + D+ L I L IS G WLD L
Sbjct: 762 CIRHNQLGRAISFLRKVKEEGIA---DEGVLFDKIFLHISTGGQDENEMRWLDVNDGFLV 818
Query: 512 -DEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIV 570
+ M G+R S +LL N ++ +L++ G+QL+ + ++ +
Sbjct: 819 INAMRELGLRPSRMSLEALLDGCAALNDSQQAHRVLQEMEREGLQLNIFSMIRVFRAYVA 878
Query: 571 QKDTPGALHLFKEMKESKIPRS 592
+D AL L +M E + S
Sbjct: 879 GEDEEKALDLLNQMPEEDLKDS 900
Score = 42.0 bits (97), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 48/263 (18%), Positives = 115/263 (43%), Gaps = 17/263 (6%)
Query: 435 KQVELITTEHGILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHV 494
+++E+++ G + ++ L+ + GK + FL + + NL++S +
Sbjct: 450 RELEIVSQVKG----GQHLFNILIDFCCKQGKISQGLDFLDEMQVRNLELS--SFSFNPF 503
Query: 495 ITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGI 554
I +D+A ++ M GV+ + Y SL+ A ++ +L + + G+
Sbjct: 504 IREFGRWTMIDEAFEMKAAMLRLGVQPTVVTYNSLISACVKIGDLERACSLFPEMKELGV 563
Query: 555 QLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMA 614
+ + CY L+Q +Q AL + + M + + + + +L+ C+ + +
Sbjct: 564 EANTHCYNPLIQGFAMQGRFDRALAVMRSMDAAGV-KPDVNTYRLLIFACSLSKDQDKAD 622
Query: 615 KLLQEVKEGQ-RIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSL---GHLPNAQTFHS 670
+L E++E + R D ++ +++ C + ++ ++ +RSL G + +
Sbjct: 623 QLFAEMQEREIRPDESIYTVMIIVYSKCG-----NVDRGIEMIRSLEKSGETAGIEAKSA 677
Query: 671 MVTGYAAIGGKYTEVTELWGEMK 693
++ G A+ G+ E L+ K
Sbjct: 678 ILHGL-AVTGRLEEALALYAVFK 699
>gi|30840221|emb|CAD61285.1| fertility restorer [Raphanus sativus]
gi|32452380|emb|CAD80165.1| restorer of fertility pentatricopeptide repeat [Raphanus sativus]
gi|32527602|gb|AAP86198.1| pentatricopeptide repeat-containing protein [Raphanus sativus]
gi|90903522|gb|ABE02309.1| Rf [Raphanus sativus]
gi|90903524|gb|ABE02310.1| Rf [Raphanus sativus]
gi|157931524|gb|ABW04886.1| PPR [Raphanus sativus]
Length = 687
Score = 55.8 bits (133), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 87/199 (43%), Gaps = 12/199 (6%)
Query: 504 LDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEA 563
+D +LL EM G+ A ++ Y +L+ + LL++ S+G+ D +
Sbjct: 411 IDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDT 470
Query: 564 LLQSKIVQKDTPGALHLFKEMKESKI------PRSG----HQEFEMLVKGCAQNHEAGLM 613
LL AL +FK M++SK P +G Q + +L+ G N L
Sbjct: 471 LLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLI-NEGKFLE 529
Query: 614 AKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVT 673
A+ L E + I ++++I CK+ + +A + M S PN TF +++
Sbjct: 530 AEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLIN 589
Query: 674 GYAAIGGKYTEVTELWGEM 692
GY G+ + EL+ EM
Sbjct: 590 GYCK-AGRVDDGLELFCEM 607
Score = 52.8 bits (125), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 44/196 (22%), Positives = 83/196 (42%), Gaps = 3/196 (1%)
Query: 497 LCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQL 556
LC+ + +A D +M R + + +L+ R E ALL G+Q
Sbjct: 159 LCVE-DRVSEALDFFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQP 217
Query: 557 DASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKL 616
Y ++ + DT AL+L ++M+E + ++ ++ L
Sbjct: 218 TQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNL 277
Query: 617 LQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYA 676
E++E + I + +N++I FC DAE+ L+ M P+ T+++++ +
Sbjct: 278 FTEMQE-KGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFV 336
Query: 677 AIGGKYTEVTELWGEM 692
GK+ E EL+ EM
Sbjct: 337 K-EGKFFEAEELYDEM 351
Score = 49.7 bits (117), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 58/259 (22%), Positives = 97/259 (37%), Gaps = 42/259 (16%)
Query: 447 LQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQ 506
LQPT+ Y +V + G T + L K E+ + + + + +LC G
Sbjct: 215 LQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKD-GRHSD 273
Query: 507 AHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQ 566
A +L EM G+ Y S++ + + R + LL++ I D Y AL+
Sbjct: 274 AQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALIN 333
Query: 567 SKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRI 626
+ + KE K + EML +G N
Sbjct: 334 AFV---------------KEGKFFEAEELYDEMLPRGIIPN------------------- 359
Query: 627 DCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVT 686
++++I FCK+ + AE M + G PN TF++++ GY + +
Sbjct: 360 ---TITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCG-AKRIDDGM 415
Query: 687 ELWGEMKS---FASSTSMN 702
EL EM A +T+ N
Sbjct: 416 ELLHEMTETGLVADTTTYN 434
>gi|449484080|ref|XP_004156778.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g10270-like [Cucumis sativus]
Length = 559
Score = 55.8 bits (133), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 49/241 (20%), Positives = 102/241 (42%), Gaps = 13/241 (5%)
Query: 447 LQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSH--DDAALGHVITLCISLGWL 504
P+ Y L K ++AG+ +E L +E L H D ++I+ ++LG L
Sbjct: 19 FSPSAVTYRHLTKGLIDAGRIEEAVDLL----REMLNKGHGADSLVFNNLISGFLNLGNL 74
Query: 505 DQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEAL 564
++A++L DE+ + V A+ + + + +E + ++ + L
Sbjct: 75 EKANELFDELKERCLVYDGVVNATFMDWFFNQGKEKEAMESYKSLLDRQFKMVPATCNVL 134
Query: 565 LQSKIVQKDTPGALHLFKEMKESKIPRS----GHQEFEMLVKGCAQNHEAGLMAKLLQEV 620
L+ + + A LF +M ++ P + F ++V C ++ + + ++V
Sbjct: 135 LEVLLKHEKKTEAWTLFDQMLDNHTPPNFQAVNSDTFNIMVNECFKHGKFAEAVETFRKV 194
Query: 621 ---KEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAA 677
+ + V +NN+I FC++ +M DAE + S P+ T +++ Y
Sbjct: 195 GTQPKSRPFAMDVAGYNNIIARFCEQGMMADAETFFAELCSKSLSPDVPTHRTLIESYLK 254
Query: 678 I 678
I
Sbjct: 255 I 255
>gi|410110089|gb|AFV61124.1| pentatricopeptide repeat-containing protein 123, partial [Lantana
macropoda]
Length = 427
Score = 55.8 bits (133), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 53/255 (20%), Positives = 117/255 (45%), Gaps = 25/255 (9%)
Query: 447 LQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQ---VSHDDAALGHVITLCISLGW 503
++P Y L++ + +A E H +++N++ V+++ + + TL
Sbjct: 187 IEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMXMIYGKTL-----E 241
Query: 504 LDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEA 563
++A++L+ EM G+ +S Y++++ + + + L + RS+GI++D +
Sbjct: 242 HEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGIEID----QI 297
Query: 564 LLQSKIVQKDTPG----ALHLFKEMKE-SKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQ 618
L Q+ IV + G A L E+K IPR ++ G + EA + + Q
Sbjct: 298 LFQTMIVAYERAGLVAHAKRLLHELKRPDNIPRDTAIH---ILAGAGRIEEATYVFR--Q 352
Query: 619 EVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAI 678
+ G+ D V + +IH K + + + +MR LG+ P++ ++ Y +
Sbjct: 353 AIDAGEVKDITV--FERMIHLLSKYKKYSNVVEVFDKMRGLGYFPDSDVIAIVLNAYGKL 410
Query: 679 GGKYTEVTELWGEMK 693
++ + +++ EM+
Sbjct: 411 -QEFDKANDVYMEMQ 424
Score = 47.8 bits (112), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 63/315 (20%), Positives = 128/315 (40%), Gaps = 40/315 (12%)
Query: 447 LQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQ 506
L P Y L+ F + G +L K E++ +V D ++I L L +
Sbjct: 12 LSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQD--RVPGDLVLYSNLIELSRKLCDYSK 69
Query: 507 AHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQ 566
A + + +G Y +++ + +A RE +L+ + ++AG+ + Y LL
Sbjct: 70 AISIFSRLKKSGFTPDLVAYNAMINVFGKAKLFREARSLIGEMKAAGVMPNTXSYSTLLT 129
Query: 567 SKIVQKDTPGALHLFKEMKESK-------------------IPRSGHQEFEMLVK-GCAQ 606
+ K AL +F EM+E K + + + F + K G
Sbjct: 130 MYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEP 189
Query: 607 N-----------HEAGLMAKLLQEVKEGQR--IDCGVHDWNNVIHFFCKKRLMQDAEKAL 653
N +A L + + + QR I+ V +N++ + K + A +
Sbjct: 190 NVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMXMIYGKTLEHEKANNLI 249
Query: 654 KRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEMKSFASSTSMNFDEELLDSVLY 713
+ M+S G PN+ T+ ++++ + + GK L+ +++ S+ + D+ L +++
Sbjct: 250 QEMQSRGIEPNSITYSTIISIWGKV-GKLDRAAMLFQKLR----SSGIEIDQILFQTMIV 304
Query: 714 TFVRGGFFARANEVV 728
+ R G A A ++
Sbjct: 305 AYERAGLVAHAKRLL 319
>gi|255568239|ref|XP_002525094.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223535553|gb|EEF37221.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 472
Score = 55.8 bits (133), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 37/171 (21%), Positives = 80/171 (46%), Gaps = 3/171 (1%)
Query: 454 YIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQAHDLLDE 513
Y ++ F EAG+ + + + + +++++++ D ++ G +D A + +E
Sbjct: 24 YTTMLDIFGEAGRIESMNYVFKQMQEKDIKI--DTVTYTSLMHWLSRNGDVDGAIKIWEE 81
Query: 514 MHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQKD 573
M G+ + Y + +K + R +E T + ++ GI + Y L++ +V
Sbjct: 82 MKEKGLYLTVVSYTAFMKILFDNKRVKEATNIYKEMLECGIPPNCHTYTVLMEYLVVSGK 141
Query: 574 TPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQ 624
AL +FK+M+E+ + + +LV+ C + E M +LQ +KE
Sbjct: 142 CQEALEIFKKMQEAGV-QPDKAMCNILVERCCEAGETNTMTPILQYMKENH 191
>gi|168014206|ref|XP_001759643.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162689182|gb|EDQ75555.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 1043
Score = 55.8 bits (133), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 65/287 (22%), Positives = 119/287 (41%), Gaps = 34/287 (11%)
Query: 502 GWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCY 561
G LD+A LL EM G S Y+SL+ ++ + ++ E +L + G D S Y
Sbjct: 577 GRLDEAVSLLREMEKQGCEPSVVTYSSLMASFYKRDQEEESLSLFDEMVRKGCVADVSTY 636
Query: 562 EALLQSKIVQKDTPGALHLFKEMKESKI-PRSGHQEFEMLVKGCAQNHEAGLMAKLLQEV 620
++ D AL +F MKE + P G+ ++ L+ ++ + ++ E+
Sbjct: 637 SLVINCLCKSDDVDQALDVFGRMKEEGMEPLLGN--YKTLLSSLVKDEKIDFALQIFNEL 694
Query: 621 KEGQRI-DCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIG 679
+E + D V +N +++ K + +A K + M++ LP+ T+ S++ G
Sbjct: 695 QESSLVPDTFV--YNIMVNGLVKSNRVDEACKLVDSMKNQNILPDLFTYTSLLDGL---- 748
Query: 680 GKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFV-----RGGFFARANEVVAMMEEG 734
GK + E +F T M + D V YT + +GG + A + M +
Sbjct: 749 GKSGRLEE------AFNMFTKMTEEGHEPDVVAYTSLMDVLGKGGKLSHALIIFRAMAKK 802
Query: 735 KMFIDKYKYRTL-------------FLKYHKTLYKGKTPKFQTEAQL 768
+ D Y +L + + ++ KG TP + L
Sbjct: 803 RCVPDVVTYSSLIDSLGKEGRVEEAYYFFENSISKGCTPNVGVYSSL 849
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 61/264 (23%), Positives = 112/264 (42%), Gaps = 11/264 (4%)
Query: 449 PTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQAH 508
P Y L+ ++G+ +E + K +E + D A ++ + G L A
Sbjct: 736 PDLFTYTSLLDGLGKSGRLEEAFNMFTKMTEEGHE--PDVVAYTSLMDVLGKGGKLSHAL 793
Query: 509 DLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSK 568
+ M Y+SL+ + + R E ++ S G + Y +L+ S
Sbjct: 794 IIFRAMAKKRCVPDVVTYSSLIDSLGKEGRVEEAYYFFENSISKGCTPNVGVYSSLIDSF 853
Query: 569 IVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRIDC 628
+ AL LF+EM+ + P + + L+ G A+ + KLL+E+ +++ C
Sbjct: 854 GKKGMVDRALELFEEMQRRQCPPN-IVTYNNLLSGLAKAGRLNVAEKLLEEM---EKVGC 909
Query: 629 GVHD---WNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEV 685
V D +N +I K ++ +AE KRM+ G +P+ TF S++ + K E
Sbjct: 910 -VPDLVTYNILIDGVGKMGMVDEAESYFKRMKEKGIVPDVITFTSLIESLGKV-DKLLEA 967
Query: 686 TELWGEMKSFASSTSMNFDEELLD 709
EL+ M+ + S+ L+D
Sbjct: 968 CELFDSMEEEGYNPSVVTYNVLID 991
Score = 49.3 bits (116), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 52/231 (22%), Positives = 99/231 (42%), Gaps = 18/231 (7%)
Query: 449 PTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVIT---LCISLGWLD 505
PT Y LV +AG+ E L + EK+ + S V+T L S D
Sbjct: 561 PTVVTYTTLVDGLGKAGRLDEAVSLLREMEKQGCEPS--------VVTYSSLMASFYKRD 612
Query: 506 QAHD---LLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYE 562
Q + L DEM G A S Y+ ++ +++ + + + G++ Y+
Sbjct: 613 QEEESLSLFDEMVRKGCVADVSTYSLVINCLCKSDDVDQALDVFGRMKEEGMEPLLGNYK 672
Query: 563 ALLQSKIVQKDTPGALHLFKEMKESK-IPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVK 621
LL S + + AL +F E++ES +P + + ++V G +++ KL+ +K
Sbjct: 673 TLLSSLVKDEKIDFALQIFNELQESSLVPDT--FVYNIMVNGLVKSNRVDEACKLVDSMK 730
Query: 622 EGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMV 672
Q I + + +++ K +++A +M GH P+ + S++
Sbjct: 731 N-QNILPDLFTYTSLLDGLGKSGRLEEAFNMFTKMTEEGHEPDVVAYTSLM 780
Score = 48.5 bits (114), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 83/190 (43%), Gaps = 5/190 (2%)
Query: 505 DQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEAL 564
D +L M G R S + SLL+ + N + +S G + Y +
Sbjct: 199 DAVVQILTAMWKEGHRISMHLLTSLLRTFGSTNNVSGALEIFNQMKSFGCNPSTNMYNFV 258
Query: 565 LQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQE-VKEG 623
L+ + A+ +F ++ + +I + Q F + V ++ A+ +QE +K G
Sbjct: 259 LELLVKGGFYHSAVIVFGKLGQFRI-QPDAQTFRIFVHSFNRSGRLDPAAEPIQEMIKSG 317
Query: 624 QRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYT 683
ID GVH + +I K + +A K M++L PN T+ ++V G A G+
Sbjct: 318 --IDPGVHTFTVLIDALVKSGNIDEACKFFNGMKNLRCSPNVVTYTTLVNGLAK-AGRLE 374
Query: 684 EVTELWGEMK 693
E E++ EMK
Sbjct: 375 EACEVFVEMK 384
Score = 43.9 bits (102), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 48/209 (22%), Positives = 84/209 (40%), Gaps = 33/209 (15%)
Query: 504 LDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEA 563
+D+A L+D M + Y SLL ++ R E + G + D Y +
Sbjct: 719 VDEACKLVDSMKNQNILPDLFTYTSLLDGLGKSGRLEEAFNMFTKMTEEGHEPDVVAYTS 778
Query: 564 LLQSKIVQKDTPGALHLFKEM-KESKIP-------------RSGHQE-----FE-MLVKG 603
L+ AL +F+ M K+ +P + G E FE + KG
Sbjct: 779 LMDVLGKGGKLSHALIIFRAMAKKRCVPDVVTYSSLIDSLGKEGRVEEAYYFFENSISKG 838
Query: 604 CAQN-----------HEAGLMAKLLQEVKEGQRIDC--GVHDWNNVIHFFCKKRLMQDAE 650
C N + G++ + L+ +E QR C + +NN++ K + AE
Sbjct: 839 CTPNVGVYSSLIDSFGKKGMVDRALELFEEMQRRQCPPNIVTYNNLLSGLAKAGRLNVAE 898
Query: 651 KALKRMRSLGHLPNAQTFHSMVTGYAAIG 679
K L+ M +G +P+ T++ ++ G +G
Sbjct: 899 KLLEEMEKVGCVPDLVTYNILIDGVGKMG 927
>gi|255661184|gb|ACU25761.1| pentatricopeptide repeat-containing protein [Lantana canescens]
Length = 426
Score = 55.8 bits (133), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 53/255 (20%), Positives = 117/255 (45%), Gaps = 25/255 (9%)
Query: 447 LQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQ---VSHDDAALGHVITLCISLGW 503
++P Y L++ + +A E H +++N++ V+++ + + TL
Sbjct: 180 IEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTL-----E 234
Query: 504 LDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEA 563
++A++L+ EM G+ +S Y++++ + + + L + RS+GI++D +
Sbjct: 235 HEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGIEID----QI 290
Query: 564 LLQSKIVQKDTPG----ALHLFKEMKE-SKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQ 618
L Q+ IV + G A L E+K IPR ++ G + EA + + Q
Sbjct: 291 LFQTMIVAYERAGLVAHAKRLLHELKRPDNIPRDTAIH---ILAGAGRIEEATYVFR--Q 345
Query: 619 EVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAI 678
+ G+ D V + +IH K + + + +MR LG+ P++ ++ Y +
Sbjct: 346 AIDAGEVKDITV--FERMIHLLSKYKKYSNVVEVFDKMRGLGYFPDSDVIAIVLNAYGKL 403
Query: 679 GGKYTEVTELWGEMK 693
++ + +++ EM+
Sbjct: 404 -QEFDKANDVYMEMQ 417
Score = 48.9 bits (115), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 63/315 (20%), Positives = 129/315 (40%), Gaps = 40/315 (12%)
Query: 447 LQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQ 506
L P Y L+ F + G +L K E++ +V D ++I L L +
Sbjct: 5 LSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQD--RVPGDLVLYSNLIELSRKLCDYSK 62
Query: 507 AHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQ 566
A + + +G Y +++ + +A RE +L+ + ++AG+ + Y LL
Sbjct: 63 AISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLIGEMKAAGVMPNTXSYSTLLT 122
Query: 567 SKIVQKDTPGALHLFKEMKESK-------------------IPRSGHQEFEMLVK-GCAQ 606
+ K AL +F EM+E K + + + F + K G
Sbjct: 123 MYVENKKFLEALSVFSEMREJKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEP 182
Query: 607 N-----------HEAGLMAKLLQEVKEGQR--IDCGVHDWNNVIHFFCKKRLMQDAEKAL 653
N +A L + + + QR I+ V +N+++ + K + A +
Sbjct: 183 NVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLI 242
Query: 654 KRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEMKSFASSTSMNFDEELLDSVLY 713
+ M+S G PN+ T+ ++++ + + GK L+ +++ S+ + D+ L +++
Sbjct: 243 QEMQSRGIEPNSITYSTIISIWGKV-GKLDRAAMLFQKLR----SSGIEIDQILFQTMIV 297
Query: 714 TFVRGGFFARANEVV 728
+ R G A A ++
Sbjct: 298 AYERAGLVAHAKRLL 312
>gi|152717466|dbj|BAF73724.1| pentatricopeptide repeat protein [Raphanus sativus]
Length = 687
Score = 55.8 bits (133), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 87/199 (43%), Gaps = 12/199 (6%)
Query: 504 LDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEA 563
+D +LL EM G+ A ++ Y +L+ + LL++ S+G+ D +
Sbjct: 411 IDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDT 470
Query: 564 LLQSKIVQKDTPGALHLFKEMKESKI------PRSG----HQEFEMLVKGCAQNHEAGLM 613
LL AL +FK M++SK P +G Q + +L+ G N L
Sbjct: 471 LLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLI-NEGKFLE 529
Query: 614 AKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVT 673
A+ L E + I ++++I CK+ + +A + M S PN TF +++
Sbjct: 530 AEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLIN 589
Query: 674 GYAAIGGKYTEVTELWGEM 692
GY G+ + EL+ EM
Sbjct: 590 GYCK-AGRVDDGLELFCEM 607
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/196 (22%), Positives = 84/196 (42%), Gaps = 3/196 (1%)
Query: 497 LCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQL 556
LC+ + +A +L +M R + + +L+ R E ALL G+Q
Sbjct: 159 LCVE-DRVSEALNLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQP 217
Query: 557 DASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKL 616
Y ++ + DT AL+L ++M+E + ++ ++ L
Sbjct: 218 TQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNL 277
Query: 617 LQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYA 676
E++E + I + +N++I FC DAE+ L+ M P+ T+++++ +
Sbjct: 278 FTEMQE-KGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFV 336
Query: 677 AIGGKYTEVTELWGEM 692
GK+ E EL+ EM
Sbjct: 337 K-EGKFFEAEELYDEM 351
Score = 49.3 bits (116), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 58/259 (22%), Positives = 97/259 (37%), Gaps = 42/259 (16%)
Query: 447 LQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQ 506
LQPT+ Y +V + G T + L K E+ + + + + +LC G
Sbjct: 215 LQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKD-GRHSD 273
Query: 507 AHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQ 566
A +L EM G+ Y S++ + + R + LL++ I D Y AL+
Sbjct: 274 AQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALIN 333
Query: 567 SKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRI 626
+ + KE K + EML +G N
Sbjct: 334 AFV---------------KEGKFFEAEELYDEMLPRGIIPN------------------- 359
Query: 627 DCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVT 686
++++I FCK+ + AE M + G PN TF++++ GY + +
Sbjct: 360 ---TITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCG-AKRIDDGM 415
Query: 687 ELWGEMKS---FASSTSMN 702
EL EM A +T+ N
Sbjct: 416 ELLHEMTETGLVADTTTYN 434
>gi|30840327|emb|CAD61286.1| fertility restorer homologue [Raphanus sativus]
gi|134302843|gb|ABO70665.1| restorer-of-fertility [Raphanus sativus]
gi|157931526|gb|ABW04887.1| PPR [Raphanus sativus]
gi|194295008|gb|ABO70666.2| restorer-of-fertility [Raphanus sativus]
Length = 687
Score = 55.8 bits (133), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 87/199 (43%), Gaps = 12/199 (6%)
Query: 504 LDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEA 563
+D +LL EM G+ A ++ Y +L+ + LL++ S+G+ D +
Sbjct: 411 IDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDT 470
Query: 564 LLQSKIVQKDTPGALHLFKEMKESKI------PRSG----HQEFEMLVKGCAQNHEAGLM 613
LL AL +FK M++SK P +G Q + +L+ G N L
Sbjct: 471 LLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLI-NEGKFLE 529
Query: 614 AKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVT 673
A+ L E + I ++++I CK+ + +A + M S PN TF +++
Sbjct: 530 AEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLIN 589
Query: 674 GYAAIGGKYTEVTELWGEM 692
GY G+ + EL+ EM
Sbjct: 590 GYCK-AGRVDDGLELFCEM 607
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/196 (22%), Positives = 84/196 (42%), Gaps = 3/196 (1%)
Query: 497 LCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQL 556
LC+ + +A +L +M R + + +L+ R E ALL G+Q
Sbjct: 159 LCVE-DRVSEALNLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQP 217
Query: 557 DASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKL 616
Y ++ + DT AL+L ++M+E + ++ ++ L
Sbjct: 218 TQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNL 277
Query: 617 LQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYA 676
E++E + I + +N++I FC DAE+ L+ M P+ T+++++ +
Sbjct: 278 FTEMQE-KGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFV 336
Query: 677 AIGGKYTEVTELWGEM 692
GK+ E EL+ EM
Sbjct: 337 K-EGKFFEAEELYDEM 351
Score = 49.3 bits (116), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 58/259 (22%), Positives = 97/259 (37%), Gaps = 42/259 (16%)
Query: 447 LQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQ 506
LQPT+ Y +V + G T + L K E+ + + + + +LC G
Sbjct: 215 LQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKD-GRHSD 273
Query: 507 AHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQ 566
A +L EM G+ Y S++ + + R + LL++ I D Y AL+
Sbjct: 274 AQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALIN 333
Query: 567 SKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRI 626
+ + KE K + EML +G N
Sbjct: 334 AFV---------------KEGKFFEAEELYDEMLPRGIIPN------------------- 359
Query: 627 DCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVT 686
++++I FCK+ + AE M + G PN TF++++ GY + +
Sbjct: 360 ---TITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCG-AKRIDDGM 415
Query: 687 ELWGEMKS---FASSTSMN 702
EL EM A +T+ N
Sbjct: 416 ELLHEMTETGLVADTTTYN 434
>gi|302756537|ref|XP_002961692.1| hypothetical protein SELMODRAFT_76597 [Selaginella moellendorffii]
gi|300170351|gb|EFJ36952.1| hypothetical protein SELMODRAFT_76597 [Selaginella moellendorffii]
Length = 1056
Score = 55.8 bits (133), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 120/622 (19%), Positives = 229/622 (36%), Gaps = 109/622 (17%)
Query: 93 LSAEIENAINEHRYGDAWKLYEQHMQMDGF-PRKTLVNKILTSFVESLDSKWLEKAY-GL 150
S I+ N R AW++YE+ + ++G P + +L ++ DS+ LE+ + +
Sbjct: 384 FSTLIQGLCNAGRVNQAWEVYERMVAVEGISPNRFTYAFLLEGLCKAGDSRRLEQCFEQM 443
Query: 151 VEQAFEEGKQILLEKEPLIYLSL---------------GLSKCGLPVPASTILRKLVATE 195
+E+ + + + +L + GLSK G+ A +L ++ +
Sbjct: 444 LEREWRSSSSWPIHSPEVDFLMVQVCRPTLVTYNTLVTGLSKSGMVRDALGLLEFMIESG 503
Query: 196 QYPPVTAWSAILAHMSLTAPGAYLAAELILEIGYLFQDGRVDPRKKCNAPLIAMKPNTNT 255
P V ++++L + + IL+ +F+ + C +PN T
Sbjct: 504 LSPDVITFNSVLDGLC--------KEQRILDAHNVFKRAL---ERGC-------RPNVVT 545
Query: 256 FNIALAGCLLFETTRKAEQLLDIMPRIGVKADSNLLIIMAHIYERNGRREELRKLQRHID 315
++ + G +A QLL M +G +A++ + + GR E+ + R +
Sbjct: 546 YSTLIDGLSKMAKMDEALQLLAKMVELGCRANTVTYSTVVDGLLKVGRMEDAVVVLRQMR 605
Query: 316 EAVNLSDIQFRQFYNCLLSCHLKFGDLNSASKMVLEMLQRA----------------KEA 359
+A L D YN L+ K L A ++ EML+ +
Sbjct: 606 DAGCLPDA---VTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPSVVTYTTLCHGLCRSG 662
Query: 360 RNSLAAAMLPFNAVGVNNRTPSEQNVNCTNSVD-LENSGIIENHILSYEDFTKDRKFVAL 418
R A +L + A R + + ++ VD L +G + + +E +D
Sbjct: 663 RFDEAVEILDYMAA----RGCAPNAITYSSIVDGLCKAGRVTEALGYFEKMARDE----- 713
Query: 419 EAEVKRVLQTLLGMLQKQVELITTEHGILQPTEKIYIKLVKAFLEAGKTKELTHFL---I 475
++ P Y L+ +AG+ E FL I
Sbjct: 714 ---------------------------VVAPHVIAYSALIDGLCKAGRIDEAYEFLERMI 746
Query: 476 KAEKENLQVSHDDAALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIE 535
+A + D +I G +D +L M G +A Y +++ AY
Sbjct: 747 RAGR-----IPDVVTFSILINGLCDAGRIDTGLELFCGMAERGCKADIYAYNAMINAYCL 801
Query: 536 ANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQ 595
ALL + ++ GI + + ++++ A+ F IP
Sbjct: 802 KGEFSAAYALLEEMKTHGIAKNTVTHGIVIKALCGNDRIDEAVSYFH-----SIPEDCRD 856
Query: 596 E--FEMLVKGCAQNHEAGLMAKLLQE-VKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKA 652
E + L+ + + +LL+ V +G D ++ V+ K + A K
Sbjct: 857 EISYNTLITSLVASRRSEQALELLRAMVADGGSPD--ACNYMTVMDGLFKAGSPEVAAKL 914
Query: 653 LKRMRSLGHLPNAQTFHSMVTG 674
L+ MRS GH P+ +T+ M++G
Sbjct: 915 LQEMRSRGHSPDLRTYTIMISG 936
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/193 (23%), Positives = 73/193 (37%), Gaps = 41/193 (21%)
Query: 504 LDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEA 563
+D+A LL +M G RA++ Y++++ ++ R + +LR R AG DA Y
Sbjct: 559 MDEALQLLAKMVELGCRANTVTYSTVVDGLLKVGRMEDAVVVLRQMRDAGCLPDAVTYNT 618
Query: 564 LLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEG 623
L+ ++ A+ L +EM E+ S
Sbjct: 619 LIDGFFKRQRLREAVGLLREMLEAGFHPS------------------------------- 647
Query: 624 QRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYT 683
V + + H C+ +A + L M + G PNA T+ S+V G G
Sbjct: 648 ------VVTYTTLCHGLCRSGRFDEAVEILDYMAARGCAPNAITYSSIVDGLCKAG---- 697
Query: 684 EVTELWGEMKSFA 696
VTE G + A
Sbjct: 698 RVTEALGYFEKMA 710
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 52/253 (20%), Positives = 99/253 (39%), Gaps = 6/253 (2%)
Query: 449 PTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQAH 508
P Y +V +AG+ E + K ++ + H A + LC + G +D+A+
Sbjct: 681 PNAITYSSIVDGLCKAGRVTEALGYFEKMARDEVVAPHVIAYSALIDGLCKA-GRIDEAY 739
Query: 509 DLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSK 568
+ L+ M AG ++ L+ +A R L G + D Y A++ +
Sbjct: 740 EFLERMIRAGRIPDVVTFSILINGLCDAGRIDTGLELFCGMAERGCKADIYAYNAMINAY 799
Query: 569 IVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRIDC 628
++ + A L +EMK I ++ +++K N + E R +
Sbjct: 800 CLKGEFSAAYALLEEMKTHGIAKNTVTH-GIVIKALCGNDRIDEAVSYFHSIPEDCRDEI 858
Query: 629 GVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTEL 688
+N +I R + A + L+ M + G P+A + +++ G G +L
Sbjct: 859 ---SYNTLITSLVASRRSEQALELLRAMVADGGSPDACNYMTVMDGLFKAGSPEV-AAKL 914
Query: 689 WGEMKSFASSTSM 701
EM+S S +
Sbjct: 915 LQEMRSRGHSPDL 927
Score = 46.2 bits (108), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 75/296 (25%), Positives = 120/296 (40%), Gaps = 46/296 (15%)
Query: 412 DRKFVALEAEVKRVLQTLLGMLQK---------QVELITTEHGILQPTEKIYIKLVKAFL 462
DR FV + E+ VL L L + QV LI P Y +V
Sbjct: 134 DRGFVP-DVEIHTVLLHALCELGRVDEAWFFFQQVLLIG-----FTPDAVTYNTMVDGLY 187
Query: 463 EAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISL------GWLDQAHDLLDEMHL 516
+AG+ ++A LQ+ + + V T I++ G L A++ D M
Sbjct: 188 KAGR--------LEAAGMVLQLLAESFSSPTVFTFTIAVDGLSKAGNLTGAYEFFDSMPQ 239
Query: 517 AGVRASSSVYASLLKAYIEANRPREVTALLRDARS-AGIQLDASCYEALLQSKIVQKDTP 575
GV ++ Y +L+ +A + LLRD S AG+ +S L Q+ +++
Sbjct: 240 TGVSPNTVTYDALIDGLCKAGKLDIALGLLRDKNSQAGMFAFSSLLHGLCQAHRLEE--- 296
Query: 576 GALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKE-GQRIDCGVHDWN 634
A+ L K M +P F L+ G Q +L +KE G D V +N
Sbjct: 297 -AIQLLKAMP--CVPNV--VCFNSLMNGLCQARRVDEAFELFDVMKESGCSAD--VITYN 349
Query: 635 NVIHFFCKKRLMQDAEKALKRM-RSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELW 689
++ CK R + +A + ++ M R+ G PN TF +++ G G V + W
Sbjct: 350 ILLKGLCKLRRIPEAYRHVELMRRTEGCSPNVVTFSTLIQGLCNAG----RVNQAW 401
Score = 44.3 bits (103), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 52/250 (20%), Positives = 100/250 (40%), Gaps = 11/250 (4%)
Query: 444 HGILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGW 503
HGI + T I ++KA + E + ++ D+ + +IT ++
Sbjct: 818 HGIAKNTVTHGI-VIKALCGNDRIDEAVSYFHSIPED----CRDEISYNTLITSLVASRR 872
Query: 504 LDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEA 563
+QA +LL M G + Y +++ +A P LL++ RS G D Y
Sbjct: 873 SEQALELLRAMVADGGSPDACNYMTVMDGLFKAGSPEVAAKLLQEMRSRGHSPDLRTYTI 932
Query: 564 LLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEG 623
++ K P A F+EM + + + L+ + + KLL+
Sbjct: 933 MISGLSKAKQLPLACDYFEEMLRKNL-KPDAIVYSSLIDAFCKADKVDDAWKLLRS---- 987
Query: 624 QRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYT 683
I+ + ++ ++ CK R A + ++ M+S P + S+ T Y A G+
Sbjct: 988 SGIEPTITMYSTMVDSLCKNRGTDKALEVIREMKSKNCEPGIHIWTSLATAYVA-EGRVD 1046
Query: 684 EVTELWGEMK 693
E +L +++
Sbjct: 1047 EAVKLVNDLQ 1056
Score = 41.6 bits (96), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 41/187 (21%), Positives = 77/187 (41%), Gaps = 4/187 (2%)
Query: 518 GVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQKDTPGA 577
G R + Y++++ N + LL + G +A Y L+ + + Q A
Sbjct: 31 GFRPTVVTYSTVIDGLCRDNEVDKGCKLLEEMAGRGCAPNAVTYNTLVNALLGQGRAKEA 90
Query: 578 LHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQE-VKEGQRIDCGVHDWNNV 636
L + M + P F +++KG + E +++ E V G D +H +
Sbjct: 91 FSLLERMAANGCPPE-LITFGLIIKGLCKEGEIEAAFRVVDEMVDRGFVPDVEIH--TVL 147
Query: 637 IHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEMKSFA 696
+H C+ + +A +++ +G P+A T+++MV G G L +SF+
Sbjct: 148 LHALCELGRVDEAWFFFQQVLLIGFTPDAVTYNTMVDGLYKAGRLEAAGMVLQLLAESFS 207
Query: 697 SSTSMNF 703
S T F
Sbjct: 208 SPTVFTF 214
Score = 41.2 bits (95), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 36/166 (21%), Positives = 76/166 (45%), Gaps = 4/166 (2%)
Query: 511 LDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIV 570
+D + + R + Y +L+ ++ R+ LL +G+ D + ++L
Sbjct: 461 VDFLMVQVCRPTLVTYNTLVTGLSKSGMVRDALGLLEFMIESGLSPDVITFNSVLDGLCK 520
Query: 571 QKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKE-GQRIDCG 629
++ A ++FK E R + L+ G ++ + +LL ++ E G R +
Sbjct: 521 EQRILDAHNVFKRALERGC-RPNVVTYSTLIDGLSKMAKMDEALQLLAKMVELGCRAN-- 577
Query: 630 VHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGY 675
++ V+ K M+DA L++MR G LP+A T+++++ G+
Sbjct: 578 TVTYSTVVDGLLKVGRMEDAVVVLRQMRDAGCLPDAVTYNTLIDGF 623
>gi|134302847|gb|ABO70667.1| restorer-of-fertility [Raphanus sativus]
Length = 687
Score = 55.8 bits (133), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 87/199 (43%), Gaps = 12/199 (6%)
Query: 504 LDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEA 563
+D +LL EM G+ A ++ Y +L+ + LL++ S+G+ D +
Sbjct: 411 IDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDT 470
Query: 564 LLQSKIVQKDTPGALHLFKEMKESKI------PRSG----HQEFEMLVKGCAQNHEAGLM 613
LL AL +FK M++SK P +G Q + +L+ G N L
Sbjct: 471 LLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLI-NEGKFLE 529
Query: 614 AKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVT 673
A+ L E + I ++++I CK+ + +A + M S PN TF +++
Sbjct: 530 AEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLIN 589
Query: 674 GYAAIGGKYTEVTELWGEM 692
GY G+ + EL+ EM
Sbjct: 590 GYCK-AGRVDDGLELFCEM 607
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/196 (22%), Positives = 84/196 (42%), Gaps = 3/196 (1%)
Query: 497 LCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQL 556
LC+ + +A +L +M R + + +L+ R E ALL G+Q
Sbjct: 159 LCVE-DRVSEALNLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQP 217
Query: 557 DASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKL 616
Y ++ + DT AL+L ++M+E + ++ ++ L
Sbjct: 218 TQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNL 277
Query: 617 LQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYA 676
E++E + I + +N++I FC DAE+ L+ M P+ T+++++ +
Sbjct: 278 FTEMQE-KGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFV 336
Query: 677 AIGGKYTEVTELWGEM 692
GK+ E EL+ EM
Sbjct: 337 K-EGKFFEAEELYDEM 351
Score = 49.3 bits (116), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 58/259 (22%), Positives = 97/259 (37%), Gaps = 42/259 (16%)
Query: 447 LQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQ 506
LQPT+ Y +V + G T + L K E+ + + + + +LC G
Sbjct: 215 LQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKD-GRHSD 273
Query: 507 AHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQ 566
A +L EM G+ Y S++ + + R + LL++ I D Y AL+
Sbjct: 274 AQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALIN 333
Query: 567 SKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRI 626
+ + KE K + EML +G N
Sbjct: 334 AFV---------------KEGKFFEAEELYDEMLPRGIIPN------------------- 359
Query: 627 DCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVT 686
++++I FCK+ + AE M + G PN TF++++ GY + +
Sbjct: 360 ---TITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCG-AKRIDDGM 415
Query: 687 ELWGEMKS---FASSTSMN 702
EL EM A +T+ N
Sbjct: 416 ELLHEMTETGLVADTTTYN 434
>gi|222630937|gb|EEE63069.1| hypothetical protein OsJ_17877 [Oryza sativa Japonica Group]
Length = 702
Score = 55.8 bits (133), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/166 (23%), Positives = 84/166 (50%), Gaps = 2/166 (1%)
Query: 513 EMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQK 572
E+++ + S + +L+ A + R V ++ ++ G + D + ++L
Sbjct: 465 EVYVGTIFPSWVILRTLVIANFKCRRLEGVEKAFQEVKAQGYKPDLVIFNSMLAMYAKNG 524
Query: 573 DTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRIDCGVHD 632
A +F +K+S + + L+ A+++E+ K+L+++K Q + V
Sbjct: 525 LYSKATEMFDSIKQSGL-SPDLITYNSLMDMYAKSNESWEAEKILKQLKSSQ-VKPDVVS 582
Query: 633 WNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAI 678
+N VI+ FCK+ L+++A++ L M + G P T+H++V GYA++
Sbjct: 583 YNTVINGFCKQGLIKEAQRILSEMIADGMAPCVVTYHTLVGGYASL 628
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 100/233 (42%), Gaps = 13/233 (5%)
Query: 494 VITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAG 553
++ +C G D +L+ M GV S Y +L+ AY + + S+G
Sbjct: 341 MLAVCGKRGMEDYVTRVLNGMKSCGVELSRDTYNTLISAYGRCGSRTYAFKMYDEMISSG 400
Query: 554 IQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLM 613
+ Y ALL Q D A + +M ++ + Q + +L++ A+ A +
Sbjct: 401 FTPCLTTYNALLNVLSRQGDWSTAQSIVSKMLKNGF-KPNDQSYSLLLQCYAKGGNAAGI 459
Query: 614 AKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVT 673
+ +EV G V VI F K R ++ EKA + +++ G+ P+ F+SM+
Sbjct: 460 ESIEKEVYVGTIFPSWVILRTLVIANF-KCRRLEGVEKAFQEVKAQGYKPDLVIFNSMLA 518
Query: 674 GYAAIGGKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANE 726
YA G Y++ TE++ +K S + L+D +A++NE
Sbjct: 519 MYAK-NGLYSKATEMFDSIKQSGLSPDLITYNSLMD----------MYAKSNE 560
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 92/196 (46%), Gaps = 10/196 (5%)
Query: 502 GWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANR--PREVTALLRDARSAGIQLDAS 559
G ++A L E+ GV + Y +L Y R PR + ALL + R+AG++ D
Sbjct: 103 GRYERALQLFAELRRQGVVPTIVTYNVVLDVYGRMGRSWPR-IVALLEEMRAAGVEPDDF 161
Query: 560 CYEALLQSKIVQKDTPGALHLFKEMK-ESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQ 618
++ + A+ F+++K +P + V G A N+ L ++L+
Sbjct: 162 TASTVIAACGRDGLLDQAVAFFEDLKARGHVPCVVTYNALLQVFGKAGNYTEAL--RVLK 219
Query: 619 EVKE-GQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAA 677
E+++ G + D +N + + + ++A K L M S G LPN T+++++T YA
Sbjct: 220 EMEDSGCQPDAVT--YNELAGTYARAGFFEEAAKCLDTMTSKGLLPNTFTYNTVMTAYAN 277
Query: 678 IGGKYTEVTELWGEMK 693
+ G+ E L+ MK
Sbjct: 278 V-GRVDEALALFDRMK 292
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 78/195 (40%), Gaps = 4/195 (2%)
Query: 487 DDAALGHVITLCISLGWLDQAHDLLDEMHL-AGVRASSSVYASLLKAYIEANRPREVTAL 545
D AAL V+ G D DLLDEM L G R Y ++L A A R L
Sbjct: 52 DAAALEMVVRALGREGQHDVVCDLLDEMPLPPGSRLDVRAYTTVLHALSRAGRYERALQL 111
Query: 546 LRDARSAGIQLDASCYEALLQS-KIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGC 604
+ R G+ Y +L + + P + L +EM+ + + ++ C
Sbjct: 112 FAELRRQGVVPTIVTYNVVLDVYGRMGRSWPRIVALLEEMRAAGVEPDDFTA-STVIAAC 170
Query: 605 AQNHEAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPN 664
++ +++K + C V +N ++ F K +A + LK M G P+
Sbjct: 171 GRDGLLDQAVAFFEDLKARGHVPC-VVTYNALLQVFGKAGNYTEALRVLKEMEDSGCQPD 229
Query: 665 AQTFHSMVTGYAAIG 679
A T++ + YA G
Sbjct: 230 AVTYNELAGTYARAG 244
Score = 48.5 bits (114), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 71/310 (22%), Positives = 118/310 (38%), Gaps = 54/310 (17%)
Query: 484 VSHDDAALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVT 543
V DD VI C G LDQA +++ G Y +LL+ + +A E
Sbjct: 156 VEPDDFTASTVIAACGRDGLLDQAVAFFEDLKARGHVPCVVTYNALLQVFGKAGNYTEAL 215
Query: 544 ALLRDARSAGIQLDASCYEAL-------------------LQSKIVQKDT---------- 574
+L++ +G Q DA Y L + SK + +T
Sbjct: 216 RVLKEMEDSGCQPDAVTYNELAGTYARAGFFEEAAKCLDTMTSKGLLPNTFTYNTVMTAY 275
Query: 575 ------PGALHLFKEMKESK-IPRSGHQE--FEMLVKGCAQNHEAGLMAKLLQEVKEGQR 625
AL LF MK++ +P F ML K +L+ ++E R
Sbjct: 276 ANVGRVDEALALFDRMKKNGYVPNVNTYNLIFGMLGK-------KSRFTAMLEMLEEMSR 328
Query: 626 IDCGVH--DWNNVIHFFCKKRLMQD-AEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKY 682
C + WN ++ C KR M+D + L M+S G + T++++++ Y G +
Sbjct: 329 SGCTPNRVTWNTMLAV-CGKRGMEDYVTRVLNGMKSCGVELSRDTYNTLISAYGRCGSR- 386
Query: 683 TEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFIDKYK 742
T +++ EM S + + LL+ R G ++ A +V+ M + +
Sbjct: 387 TYAFKMYDEMISSGFTPCLTTYNALLN----VLSRQGDWSTAQSIVSKMLKNGFKPNDQS 442
Query: 743 YRTLFLKYHK 752
Y L Y K
Sbjct: 443 YSLLLQCYAK 452
>gi|115462947|ref|NP_001055073.1| Os05g0275000 [Oryza sativa Japonica Group]
gi|50878350|gb|AAT85125.1| unknown protein, contains pentatricopeptide (PPR) repeat, PF01535
[Oryza sativa Japonica Group]
gi|113578624|dbj|BAF16987.1| Os05g0275000 [Oryza sativa Japonica Group]
gi|215695094|dbj|BAG90285.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 793
Score = 55.8 bits (133), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/166 (23%), Positives = 84/166 (50%), Gaps = 2/166 (1%)
Query: 513 EMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQK 572
E+++ + S + +L+ A + R V ++ ++ G + D + ++L
Sbjct: 556 EVYVGTIFPSWVILRTLVIANFKCRRLEGVEKAFQEVKAQGYKPDLVIFNSMLAMYAKNG 615
Query: 573 DTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRIDCGVHD 632
A +F +K+S + + L+ A+++E+ K+L+++K Q + V
Sbjct: 616 LYSKATEMFDSIKQSGL-SPDLITYNSLMDMYAKSNESWEAEKILKQLKSSQ-VKPDVVS 673
Query: 633 WNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAI 678
+N VI+ FCK+ L+++A++ L M + G P T+H++V GYA++
Sbjct: 674 YNTVINGFCKQGLIKEAQRILSEMIADGMAPCVVTYHTLVGGYASL 719
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 100/233 (42%), Gaps = 13/233 (5%)
Query: 494 VITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAG 553
++ +C G D +L+ M GV S Y +L+ AY + + S+G
Sbjct: 432 MLAVCGKRGMEDYVTRVLNGMKSCGVELSRDTYNTLISAYGRCGSRTYAFKMYDEMISSG 491
Query: 554 IQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLM 613
+ Y ALL Q D A + +M ++ + Q + +L++ A+ A +
Sbjct: 492 FTPCLTTYNALLNVLSRQGDWSTAQSIVSKMLKNGF-KPNDQSYSLLLQCYAKGGNAAGI 550
Query: 614 AKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVT 673
+ +EV G V VI F K R ++ EKA + +++ G+ P+ F+SM+
Sbjct: 551 ESIEKEVYVGTIFPSWVILRTLVIANF-KCRRLEGVEKAFQEVKAQGYKPDLVIFNSMLA 609
Query: 674 GYAAIGGKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANE 726
YA G Y++ TE++ +K S + L+D +A++NE
Sbjct: 610 MYAK-NGLYSKATEMFDSIKQSGLSPDLITYNSLMD----------MYAKSNE 651
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 92/196 (46%), Gaps = 10/196 (5%)
Query: 502 GWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANR--PREVTALLRDARSAGIQLDAS 559
G ++A L E+ GV + Y +L Y R PR + ALL + R+AG++ D
Sbjct: 194 GRYERALQLFAELRRQGVVPTIVTYNVVLDVYGRMGRSWPR-IVALLEEMRAAGVEPDDF 252
Query: 560 CYEALLQSKIVQKDTPGALHLFKEMK-ESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQ 618
++ + A+ F+++K +P + V G A N+ L ++L+
Sbjct: 253 TASTVIAACGRDGLLDQAVAFFEDLKARGHVPCVVTYNALLQVFGKAGNYTEAL--RVLK 310
Query: 619 EVKE-GQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAA 677
E+++ G + D +N + + + ++A K L M S G LPN T+++++T YA
Sbjct: 311 EMEDSGCQPDAVT--YNELAGTYARAGFFEEAAKCLDTMTSKGLLPNTFTYNTVMTAYAN 368
Query: 678 IGGKYTEVTELWGEMK 693
+ G+ E L+ MK
Sbjct: 369 V-GRVDEALALFDRMK 383
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 78/195 (40%), Gaps = 4/195 (2%)
Query: 487 DDAALGHVITLCISLGWLDQAHDLLDEMHL-AGVRASSSVYASLLKAYIEANRPREVTAL 545
D AAL V+ G D DLLDEM L G R Y ++L A A R L
Sbjct: 143 DAAALEMVVRALGREGQHDVVCDLLDEMPLPPGSRLDVRAYTTVLHALSRAGRYERALQL 202
Query: 546 LRDARSAGIQLDASCYEALLQS-KIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGC 604
+ R G+ Y +L + + P + L +EM+ + + ++ C
Sbjct: 203 FAELRRQGVVPTIVTYNVVLDVYGRMGRSWPRIVALLEEMRAAGVEPDDFTA-STVIAAC 261
Query: 605 AQNHEAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPN 664
++ +++K + C V +N ++ F K +A + LK M G P+
Sbjct: 262 GRDGLLDQAVAFFEDLKARGHVPC-VVTYNALLQVFGKAGNYTEALRVLKEMEDSGCQPD 320
Query: 665 AQTFHSMVTGYAAIG 679
A T++ + YA G
Sbjct: 321 AVTYNELAGTYARAG 335
Score = 48.9 bits (115), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 71/310 (22%), Positives = 118/310 (38%), Gaps = 54/310 (17%)
Query: 484 VSHDDAALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVT 543
V DD VI C G LDQA +++ G Y +LL+ + +A E
Sbjct: 247 VEPDDFTASTVIAACGRDGLLDQAVAFFEDLKARGHVPCVVTYNALLQVFGKAGNYTEAL 306
Query: 544 ALLRDARSAGIQLDASCYEAL-------------------LQSKIVQKDT---------- 574
+L++ +G Q DA Y L + SK + +T
Sbjct: 307 RVLKEMEDSGCQPDAVTYNELAGTYARAGFFEEAAKCLDTMTSKGLLPNTFTYNTVMTAY 366
Query: 575 ------PGALHLFKEMKESK-IPRSGHQE--FEMLVKGCAQNHEAGLMAKLLQEVKEGQR 625
AL LF MK++ +P F ML K +L+ ++E R
Sbjct: 367 ANVGRVDEALALFDRMKKNGYVPNVNTYNLIFGMLGK-------KSRFTAMLEMLEEMSR 419
Query: 626 IDCGVH--DWNNVIHFFCKKRLMQD-AEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKY 682
C + WN ++ C KR M+D + L M+S G + T++++++ Y G +
Sbjct: 420 SGCTPNRVTWNTMLAV-CGKRGMEDYVTRVLNGMKSCGVELSRDTYNTLISAYGRCGSR- 477
Query: 683 TEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFIDKYK 742
T +++ EM S + + LL+ R G ++ A +V+ M + +
Sbjct: 478 TYAFKMYDEMISSGFTPCLTTYNALLN----VLSRQGDWSTAQSIVSKMLKNGFKPNDQS 533
Query: 743 YRTLFLKYHK 752
Y L Y K
Sbjct: 534 YSLLLQCYAK 543
>gi|414877568|tpg|DAA54699.1| TPA: hypothetical protein ZEAMMB73_211194, partial [Zea mays]
Length = 709
Score = 55.8 bits (133), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 74/178 (41%), Gaps = 1/178 (0%)
Query: 502 GWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCY 561
G +D+A + + M GV Y L+K A R E ++ G D Y
Sbjct: 212 GRVDKALEFAERMRRVGVDPDVVTYNCLIKGLCGARRIVEALEMIGSMLQNGCPPDKISY 271
Query: 562 EALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVK 621
++ +K +L + M+ + ML+ G A++ A L+E
Sbjct: 272 FTVMSFLCKEKRVAEVWNLLERMRNDAGIFPDQITYNMLIHGLAKHGHADEALTFLRE-S 330
Query: 622 EGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIG 679
EG+R ++ ++H FC M +A++ + M S G P+ T+ ++V G+ IG
Sbjct: 331 EGKRFRVDQVGYSAIVHSFCLNGRMSEAKEIIGEMISKGCRPDVVTYSAVVDGFCRIG 388
>gi|297743431|emb|CBI36298.3| unnamed protein product [Vitis vinifera]
Length = 641
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 98/460 (21%), Positives = 172/460 (37%), Gaps = 61/460 (13%)
Query: 266 FETTRKAEQLLDIMPRIG-VKADSNLLIIMAHIYERNGRREELRKLQRHIDEAVNLSDIQ 324
F LL+++ ++G ++ IM + G+ EE RKL I++ I
Sbjct: 162 FPDVIACNSLLNMLVKLGRIEIARKFTCIMVKGLCKEGKLEEGRKL---IEDRWGQGCIP 218
Query: 325 FRQFYNCLLSCHLKFGDLNSASKMVLEMLQRAKEARNSLAAAMLPFNAVGVNNRTPSEQN 384
FYN L+ + K GD+ A+ + +E+ + LP
Sbjct: 219 NIIFYNTLIDGYCKKGDMEMANGLFIELKLKG----------FLP--------------- 253
Query: 385 VNCTNSVDLENSGIIENHILSYEDFTK-DRKFVALEAEV----KRVLQTLLGMLQKQ--- 436
+E G I N DF DR + + + +V T++ K
Sbjct: 254 -------TVETYGAIINGFCKKGDFKAIDRLLMEMNSRGLTVNVQVYNTIIDARYKHGHI 306
Query: 437 VELITTEHGILQ----PTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALG 492
V+ + T G+++ P Y L+ GK E L +A + L + +
Sbjct: 307 VKAVETIEGMIECGCKPDIVTYNTLISGSCRDGKVSEADQLLEQALGKGLM--PNKFSYT 364
Query: 493 HVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSA 552
+I G D+A + L EM G + Y +L+ + A +
Sbjct: 365 PLIHAYCKQGGYDRASNWLIEMTERGHKPDLVTYGALVHGLVVAGEVDVALTIREKMLER 424
Query: 553 GIQLDASCYEALLQSKIVQKDTPGALHLFKEM-KESKIPRSGHQEFEMLVKGCAQNHEAG 611
G+ DA Y L+ + P A L EM +S +P + + LV G +N
Sbjct: 425 GVFPDAGIYNILMSGLCKKFKLPAAKLLLAEMLDQSVLPDA--FVYATLVDGFIRNGNLD 482
Query: 612 LMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSM 671
KL + E + ++ G+ +N +I +CK +M+DA + RM+ P+ T+ ++
Sbjct: 483 EARKLFELTIE-KGMNPGIVGYNAMIKGYCKFGMMKDAMACINRMKKRHLAPDEFTYSTV 541
Query: 672 VTGYAAIGGKYTEVTELWGEMKSFASSTSMNFDEELLDSV 711
+ G Y + +L G K F M ++D +
Sbjct: 542 IDG-------YVKQHDLDGAQKMFREMVKMKCKPNVMDGL 574
Score = 40.4 bits (93), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 33/149 (22%), Positives = 68/149 (45%), Gaps = 6/149 (4%)
Query: 599 MLVKGCAQNHEAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRS 658
++VKG + + KL+++ + GQ + +N +I +CKK M+ A ++
Sbjct: 190 IMVKGLCKEGKLEEGRKLIED-RWGQGCIPNIIFYNTLIDGYCKKGDMEMANGLFIELKL 248
Query: 659 LGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRG 718
G LP +T+ +++ G+ G + + L EM +S + + ++ ++++ +
Sbjct: 249 KGFLPTVETYGAIINGFCK-KGDFKAIDRLLMEM----NSRGLTVNVQVYNTIIDARYKH 303
Query: 719 GFFARANEVVAMMEEGKMFIDKYKYRTLF 747
G +A E + M E D Y TL
Sbjct: 304 GHIVKAVETIEGMIECGCKPDIVTYNTLI 332
>gi|255538676|ref|XP_002510403.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223551104|gb|EEF52590.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 719
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 94/225 (41%), Gaps = 14/225 (6%)
Query: 447 LQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQ 506
++PTE++Y L+++F + G E + Q + + L ++ G DQ
Sbjct: 485 IKPTEEMYFALLRSFAQLGDVSEAHKIATAMQFAGFQPNLEFYTL--LVEAHGRAGQPDQ 542
Query: 507 AHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQ 566
A D+M G R V ASL+ AY + N LL +A +QL +E L
Sbjct: 543 ARRNFDQMIKVGFRPDDRVAASLIAAYEKKN-------LLDEALDILLQLKKDGFEPGLA 595
Query: 567 SKIVQKDTPGALHLFKEMKE--SKIPRSGH-QEFEMLVKGCAQNHEAGLMAKLLQ--EVK 621
+ V D L L E ++ KI G F++ V C G K LQ V
Sbjct: 596 TCTVLVDWLAKLQLVDEAEQLLGKIAEQGEAPPFKIQVSLCDMYARVGNEKKALQVLGVL 655
Query: 622 EGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQ 666
E ++ G +D+ VIH R +Q+A + M + G+ + Q
Sbjct: 656 EAKKEQLGSNDFERVIHGLIAGRFVQEATRVHALMEAQGYSASEQ 700
>gi|297743427|emb|CBI36294.3| unnamed protein product [Vitis vinifera]
Length = 517
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/197 (23%), Positives = 83/197 (42%), Gaps = 8/197 (4%)
Query: 502 GWLD-----QAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQL 556
GW D +A L +EM G Y SLL+A + E L R+ S G+
Sbjct: 201 GWGDVGDSSEARKLFEEMRERGCAVDVVAYNSLLEALCKGGNVDEAYKLFREMGSNGLAP 260
Query: 557 DASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKL 616
DA Y +++ D A + M+ + + + +VK ++ + +L
Sbjct: 261 DACSYSIFIRAYCEVNDIHSAFQVLDRMRRYNLVPNVFT-YNCIVKKLCKSEKVDEAYQL 319
Query: 617 LQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYA 676
L E+ E + + + +N + F C + A + + RM +P+ T++ MV
Sbjct: 320 LDEMIE-RGVSPDLWSYNAIQAFHCDHCEVNKALRLISRMEKENCMPDRHTYN-MVLKML 377
Query: 677 AIGGKYTEVTELWGEMK 693
G++ VT++WG M+
Sbjct: 378 LRVGRFDRVTDVWGGME 394
Score = 41.6 bits (96), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 32/155 (20%), Positives = 68/155 (43%), Gaps = 5/155 (3%)
Query: 525 VYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEM 584
++ + +AY AN P + G++ + LL +K A F ++
Sbjct: 125 IFWLIFRAYCRANLPGDAIRAFHQMGDFGVKAGVGDVDQLLYVLCKRKHVKQAQEFFDKV 184
Query: 585 KESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKE-GQRIDCGVHDWNNVIHFFCKK 643
+P + + + +L++G ++ KL +E++E G +D V +N+++ CK
Sbjct: 185 NVEVMPNA--KTYSILMRGWGDVGDSSEARKLFEEMRERGCAVD--VVAYNSLLEALCKG 240
Query: 644 RLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAI 678
+ +A K + M S G P+A ++ + Y +
Sbjct: 241 GNVDEAYKLFREMGSNGLAPDACSYSIFIRAYCEV 275
>gi|125551633|gb|EAY97342.1| hypothetical protein OsI_19265 [Oryza sativa Indica Group]
Length = 793
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/166 (23%), Positives = 84/166 (50%), Gaps = 2/166 (1%)
Query: 513 EMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQK 572
E+++ + S + +L+ A + R V ++ ++ G + D + ++L
Sbjct: 556 EVYVGTIFPSWVILRTLVIANFKCRRLEGVEKAFQEVKAQGYKPDLVIFNSMLAMYAKNG 615
Query: 573 DTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRIDCGVHD 632
A +F +K+S + + L+ A+++E+ K+L+++K Q + V
Sbjct: 616 LYSKATEMFDSIKQSGL-SPDLITYNSLMDMYAKSNESWEAEKILKQLKSSQ-VKPDVVS 673
Query: 633 WNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAI 678
+N VI+ FCK+ L+++A++ L M + G P T+H++V GYA++
Sbjct: 674 YNTVINGFCKQGLIKEAQRILSEMIADGMAPCVVTYHTLVGGYASL 719
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 100/233 (42%), Gaps = 13/233 (5%)
Query: 494 VITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAG 553
++ +C G D +L+ M GV S Y +L+ AY + + S+G
Sbjct: 432 MLAVCGKRGMEDYVTRVLNGMKSCGVELSRDTYNTLISAYGRCGSRTYAFKMYDEMISSG 491
Query: 554 IQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLM 613
+ Y ALL Q D A + +M ++ + Q + +L++ A+ A +
Sbjct: 492 FTPCLTTYNALLNVLSRQGDWSTAQSIVSKMLKNGF-KPNDQSYSLLLQCYAKGGNAAGI 550
Query: 614 AKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVT 673
+ +EV G V VI F K R ++ EKA + +++ G+ P+ F+SM+
Sbjct: 551 ESIEKEVYVGTIFPSWVILRTLVIANF-KCRRLEGVEKAFQEVKAQGYKPDLVIFNSMLA 609
Query: 674 GYAAIGGKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANE 726
YA G Y++ TE++ +K S + L+D +A++NE
Sbjct: 610 MYAK-NGLYSKATEMFDSIKQSGLSPDLITYNSLMD----------MYAKSNE 651
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 92/196 (46%), Gaps = 10/196 (5%)
Query: 502 GWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANR--PREVTALLRDARSAGIQLDAS 559
G ++A L E+ GV + Y +L Y R PR + ALL + R+AG++ D
Sbjct: 194 GRYERALQLFAELRRQGVVPTIVTYNVVLDVYGRMGRSWPR-IVALLEEMRAAGVEPDDF 252
Query: 560 CYEALLQSKIVQKDTPGALHLFKEMK-ESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQ 618
++ + A+ F+++K +P + V G A N+ L ++L+
Sbjct: 253 TASTVIAACGRDGLLDQAVAFFEDLKARGHVPCVVTYNALLQVFGKAGNYTEAL--RVLK 310
Query: 619 EVKE-GQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAA 677
E+++ G + D +N + + + ++A K L M S G LPN T+++++T YA
Sbjct: 311 EMEDSGCQPDAVT--YNELAGTYARAGFFEEAAKCLDTMTSKGLLPNTFTYNTVMTAYAN 368
Query: 678 IGGKYTEVTELWGEMK 693
+ G+ E L+ MK
Sbjct: 369 V-GRVDEALALFDRMK 383
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 78/195 (40%), Gaps = 4/195 (2%)
Query: 487 DDAALGHVITLCISLGWLDQAHDLLDEMHL-AGVRASSSVYASLLKAYIEANRPREVTAL 545
D AAL V+ G D DLLDEM L G R Y ++L A A R L
Sbjct: 143 DAAALEMVVRALGREGQHDVVCDLLDEMPLPPGSRLDVRAYTTVLHALSRAGRYERALQL 202
Query: 546 LRDARSAGIQLDASCYEALLQS-KIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGC 604
+ R G+ Y +L + + P + L +EM+ + + ++ C
Sbjct: 203 FAELRRQGVVPTIVTYNVVLDVYGRMGRSWPRIVALLEEMRAAGVEPDDFTA-STVIAAC 261
Query: 605 AQNHEAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPN 664
++ +++K + C V +N ++ F K +A + LK M G P+
Sbjct: 262 GRDGLLDQAVAFFEDLKARGHVPC-VVTYNALLQVFGKAGNYTEALRVLKEMEDSGCQPD 320
Query: 665 AQTFHSMVTGYAAIG 679
A T++ + YA G
Sbjct: 321 AVTYNELAGTYARAG 335
Score = 48.9 bits (115), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 71/310 (22%), Positives = 118/310 (38%), Gaps = 54/310 (17%)
Query: 484 VSHDDAALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVT 543
V DD VI C G LDQA +++ G Y +LL+ + +A E
Sbjct: 247 VEPDDFTASTVIAACGRDGLLDQAVAFFEDLKARGHVPCVVTYNALLQVFGKAGNYTEAL 306
Query: 544 ALLRDARSAGIQLDASCYEAL-------------------LQSKIVQKDT---------- 574
+L++ +G Q DA Y L + SK + +T
Sbjct: 307 RVLKEMEDSGCQPDAVTYNELAGTYARAGFFEEAAKCLDTMTSKGLLPNTFTYNTVMTAY 366
Query: 575 ------PGALHLFKEMKESK-IPRSGHQE--FEMLVKGCAQNHEAGLMAKLLQEVKEGQR 625
AL LF MK++ +P F ML K +L+ ++E R
Sbjct: 367 ANVGRVDEALALFDRMKKNGYVPNVNTYNLIFGMLGK-------KSRFTAMLEMLEEMSR 419
Query: 626 IDCGVH--DWNNVIHFFCKKRLMQD-AEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKY 682
C + WN ++ C KR M+D + L M+S G + T++++++ Y G +
Sbjct: 420 SGCTPNRVTWNTMLAV-CGKRGMEDYVTRVLNGMKSCGVELSRDTYNTLISAYGRCGSR- 477
Query: 683 TEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFIDKYK 742
T +++ EM S + + LL+ R G ++ A +V+ M + +
Sbjct: 478 TYAFKMYDEMISSGFTPCLTTYNALLN----VLSRQGDWSTAQSIVSKMLKNGFKPNDQS 533
Query: 743 YRTLFLKYHK 752
Y L Y K
Sbjct: 534 YSLLLQCYAK 543
>gi|147797621|emb|CAN62945.1| hypothetical protein VITISV_002230 [Vitis vinifera]
Length = 912
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 63/294 (21%), Positives = 130/294 (44%), Gaps = 25/294 (8%)
Query: 397 GIIENHILSYEDFTKDRKFVALEAEVKRVLQTLLGMLQKQVELIT--TEHGILQPTEKIY 454
G+IEN +++ V + + G+++ ++++ TE P Y
Sbjct: 267 GMIENAKNVFDEMGCKPNLVTYNTMINGFCKK--GLMESAMKIVDQMTETEDCMPDTVTY 324
Query: 455 IKLVKAFLEAGKTKELTHFLIKAEKENLQ---VSHDDAALGHVITLCISLGWLDQAHDLL 511
L+ + + G+ +E ++ + N + ++++ G LC++ G +D+A ++
Sbjct: 325 TTLIDGYCKRGELEEAMKYMEEMVSRNCEPNVLTYNAIIYG----LCLN-GNVDEAKRMM 379
Query: 512 DEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQ 571
M L G++ + + + S+LK + + L++ G++ DA Y ++
Sbjct: 380 TRMRLNGLKDNVATHTSILKGLCVVGKLDDAARHLKEMVGLGMEADAKAYGVVVNEYCKI 439
Query: 572 KDTPGALHLFKEMKESKIP---RSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRIDC 628
A+ L KEMK I S + F +LV+ + +AGL +L+++K+ + C
Sbjct: 440 GKADDAISLLKEMKSRGINPSVSSFNAVFRILVES-GKTDKAGL---ILRQMKQ---LGC 492
Query: 629 GVH--DWNNVIHFFCK-KRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIG 679
+ ++ VI CK K M + E+ + M GH +A + +V GY G
Sbjct: 493 TPNFLSYSTVIDGLCKAKGRMHEVEEFVDDMCRNGHHLDASMYSWLVKGYCEDG 546
Score = 44.3 bits (103), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 79/378 (20%), Positives = 150/378 (39%), Gaps = 39/378 (10%)
Query: 249 MKPNTNTFNIALAGCLLFETTRKAEQLLDIMPRIGVKADSNLLIIMAHIYERNGRREELR 308
+KP+ +T+ + G A+ + D M G K + M + + + G E
Sbjct: 249 VKPDVSTYTTIIRGYCKMGMIENAKNVFDEM---GCKPNLVTYNTMINGFCKKGLMESAM 305
Query: 309 KLQRHIDEAVNLSDIQFRQF-YNCLLSCHLKFGDLNSASKMVLEMLQRAKEARNSLAAAM 367
K+ +D+ D Y L+ + K G+L A K + EM+ R E +
Sbjct: 306 KI---VDQMTETEDCMPDTVTYTTLIDGYCKRGELEEAMKYMEEMVSRNCEPN------V 356
Query: 368 LPFNAV--GVNNRTPSEQNVNCTNSVDLENSGIIENHILSYEDFTKDRKFVALEAEVKRV 425
L +NA+ G+ ++ + L +++++ ++ K V + R
Sbjct: 357 LTYNAIIYGLCLNGNVDEAKRMMTRMRLNG---LKDNVATHTSILKGLCVVGKLDDAARH 413
Query: 426 LQTLLGMLQKQVELITTEHGILQPTEKIYIKLVKAFLEAGKTKELTHFL--IKAEKENLQ 483
L+ ++G+ ++ K Y +V + + GK + L +K+ N
Sbjct: 414 LKEMVGLG-------------MEADAKAYGVVVNEYCKIGKADDAISLLKEMKSRGINPS 460
Query: 484 VSHDDAALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEA-NRPREV 542
VS +A V + + G D+A +L +M G + Y++++ +A R EV
Sbjct: 461 VSSFNA----VFRILVESGKTDKAGLILRQMKQLGCTPNFLSYSTVIDGLCKAKGRMHEV 516
Query: 543 TALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVK 602
+ D G LDAS Y L++ + A+ LF EM + + + F VK
Sbjct: 517 EEFVDDMCRNGHHLDASMYSWLVKGYCEDGNADMAMRLFCEMLDMGYVIN-LESFLAFVK 575
Query: 603 GCAQNHEAGLMAKLLQEV 620
G + +A + K +E+
Sbjct: 576 GLSAKEKAFEVEKFFEEM 593
Score = 39.3 bits (90), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 54/251 (21%), Positives = 95/251 (37%), Gaps = 20/251 (7%)
Query: 485 SHDDAALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTA 544
SH + L IS G A LL H R S A +KAY + R
Sbjct: 148 SHSHLCYVAITDLLISHGLFSTASSLLQSHH----RLSDFAAAKFVKAYGDRGDIRGAIH 203
Query: 545 LLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKG- 603
A+ Y A+L + A +F ++ + + + + +++G
Sbjct: 204 WFHRAKKMESGRCLFSYNAILGVFVKANRIMLARAVFDQIVKEGVVKPDVSTYTTIIRGY 263
Query: 604 CAQNHEAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRM-RSLGHL 662
C M + + V + + +N +I+ FCKK LM+ A K + +M + +
Sbjct: 264 CKMG-----MIENAKNVFDEMGCKPNLVTYNTMINGFCKKGLMESAMKIVDQMTETEDCM 318
Query: 663 PNAQTFHSMVTGYAAIGGKYTEVTELWGEMKSFASSTSMNFDEELL--DSVLYTFVRGGF 720
P+ T+ +++ GY G EL MK S N + +L ++++Y G
Sbjct: 319 PDTVTYTTLIDGYCKRG-------ELEEAMKYMEEMVSRNCEPNVLTYNAIIYGLCLNGN 371
Query: 721 FARANEVVAMM 731
A ++ M
Sbjct: 372 VDEAKRMMTRM 382
>gi|413953163|gb|AFW85812.1| hypothetical protein ZEAMMB73_202457 [Zea mays]
Length = 731
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/260 (21%), Positives = 98/260 (37%), Gaps = 42/260 (16%)
Query: 493 HVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSA 552
+ + L +S L A D M GV + Y L++A +E ++LRD R A
Sbjct: 160 NAVLLALSDASLTSARRFFDSMLSDGVAPNVYTYNILVRALCGRGHRKEALSILRDMRGA 219
Query: 553 GIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGL 612
G + Y L+ + + GA L M+ E GL
Sbjct: 220 GCGPNVVTYNTLVAAFFRAGEVDGAERLVGMMR-----------------------EGGL 256
Query: 613 MAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMV 672
L+ +N++++ CK M+DA K M G P+ +++++V
Sbjct: 257 KPNLVT--------------FNSMVNGMCKAGKMEDARKVFDEMVREGLAPDGVSYNTLV 302
Query: 673 TGYAAIGGKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMME 732
GY G + E ++ EM + + D S+++ + G RA +V M
Sbjct: 303 GGYCKAGCSH-EALSVFAEM----TQKGIMPDVVTFTSLIHVMCKAGNLERAVTLVRQMR 357
Query: 733 EGKMFIDKYKYRTLFLKYHK 752
E + +++ + L + K
Sbjct: 358 ERGLQMNEVTFTALIDGFCK 377
Score = 47.4 bits (111), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 50/234 (21%), Positives = 99/234 (42%), Gaps = 6/234 (2%)
Query: 447 LQPTEKIYIKLVKAFLEAGKTKE-LTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLD 505
L P Y LV + +AG + E L+ F AE + D +I + G L+
Sbjct: 291 LAPDGVSYNTLVGGYCKAGCSHEALSVF---AEMTQKGIMPDVVTFTSLIHVMCKAGNLE 347
Query: 506 QAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALL 565
+A L+ +M G++ + + +L+ + + + +R + I+ CY AL+
Sbjct: 348 RAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLAVRGMKQCRIKPSVVCYNALI 407
Query: 566 QSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQR 625
+ A L EM E+K + + ++ +N + +L Q++ E
Sbjct: 408 NGYCMVGRMDEARELLHEM-EAKGLKPDVVTYSTIISAYCKNCDTHSAFELNQQMLEKGV 466
Query: 626 IDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIG 679
+ + ++++I C ++ + DA K M LG P+ T+ S++ G+ G
Sbjct: 467 LPDAI-TYSSLIRVLCGEKRLSDAHVLFKNMIKLGLQPDEFTYTSLIDGHCKEG 519
Score = 40.4 bits (93), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 89/427 (20%), Positives = 165/427 (38%), Gaps = 54/427 (12%)
Query: 251 PNTNTFNIALAGCLLFETTRKAEQLLDIMPRIGVKADSNLLIIMAHIYERNGRREELRKL 310
PN T+N +A AE+L+ +M G+K + M + + G+ E+ RK+
Sbjct: 223 PNVVTYNTLVAAFFRAGEVDGAERLVGMMREGGLKPNLVTFNSMVNGMCKAGKMEDARKV 282
Query: 311 QRHIDEAVNLSDIQFRQFYNCLLSCHLKFGDLNSASKMVLEMLQRAKEARNSLAAAMLPF 370
DE V YN L+ + K G + A + EM Q+ + ++ F
Sbjct: 283 ---FDEMVREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKG------IMPDVVTF 333
Query: 371 NAVGVNNRTPSEQNVNCTNSVDLENSGIIENHILSYEDFTKDRKFVAL------EAEVKR 424
++ +V C + +LE + + + + F AL + +
Sbjct: 334 TSL---------IHVMC-KAGNLERAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDD 383
Query: 425 VLQTLLGMLQKQVELITTEHGILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQV 484
L + GM Q ++ +P+ Y L+ + G+ E L + E + L+
Sbjct: 384 ALLAVRGMKQCRI----------KPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLK- 432
Query: 485 SHDDAALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTA 544
D +I+ A +L +M GV + Y+SL++ R +
Sbjct: 433 -PDVVTYSTIISAYCKNCDTHSAFELNQQMLEKGVLPDAITYSSLIRVLCGEKRLSDAHV 491
Query: 545 LLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEM-KESKIPRSGHQEFEMLVKG 603
L ++ G+Q D Y +L+ + + AL L +M K +P + +L+ G
Sbjct: 492 LFKNMIKLGLQPDEFTYTSLIDGHCKEGNVESALSLHDKMVKAGVLPDV--VTYSVLING 549
Query: 604 CAQNHEA----GLMAKLLQE--VKEGQRIDCGVH-----DWNNVIHF---FCKKRLMQDA 649
+++ A L+ KL E + + D +H + +V+ FC K LM +A
Sbjct: 550 LSKSARAMEAQQLLFKLYHEDPIPANTKYDALMHCCRKAELKSVLALLKGFCMKGLMNEA 609
Query: 650 EKALKRM 656
+K + M
Sbjct: 610 DKVYQSM 616
>gi|354726093|emb|CCD31439.1| RNA processing factor 3 [Arabidopsis thaliana]
Length = 629
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 56/271 (20%), Positives = 116/271 (42%), Gaps = 13/271 (4%)
Query: 480 ENLQVSHDDAALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRP 539
+NL++S+D + +I L A +L +M G +SLL Y + R
Sbjct: 107 QNLRISYDLYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHSKRI 166
Query: 540 REVTALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQE--- 596
+ AL+ G + D + L+ + A+ L +M + R +
Sbjct: 167 SDAVALVDQMVEMGYKPDTVTFNTLIHGLFLHNKASEAVALVDQM----VQRGCQPDLVT 222
Query: 597 FEMLVKGCAQNHEAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRM 656
+ +V G + + L LL+++++G +I+ V +N +I CK + + DA +M
Sbjct: 223 YGAVVNGLCKRGDIDLALSLLKKMEKG-KIEADVVIYNTIIDGLCKYKHIDDAFALFNKM 281
Query: 657 RSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFV 716
+ G P+ T++S+++ G++++ + L M + ++ L+D+ FV
Sbjct: 282 ETKGIRPDVFTYNSLISCLCNY-GRWSDASRLLSNMIERKINPNVVTFSALIDA----FV 336
Query: 717 RGGFFARANEVVAMMEEGKMFIDKYKYRTLF 747
+ G A ++ M + + D + Y +L
Sbjct: 337 KEGKLVEAEKLYDEMIKRSIDPDIFTYSSLI 367
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 59/255 (23%), Positives = 108/255 (42%), Gaps = 21/255 (8%)
Query: 447 LQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEK---ENLQVSHDDAALGH---VITLCIS 500
+ P + L+ AF++ GK L++AEK E ++ S D + + C+
Sbjct: 321 INPNVVTFSALIDAFVKEGK-------LVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMH 373
Query: 501 LGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASC 560
LD+A + + M + Y +L+K + +A R E L R+ G+ +
Sbjct: 374 -DRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVT 432
Query: 561 YEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQ-- 618
Y L+Q D A +FK+M +P + +L+ G + G + K L
Sbjct: 433 YNTLIQGLFQAGDCDMAQKIFKKMVSDGVP-PDIITYSILLDGLCK---YGKLEKALVVF 488
Query: 619 EVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAI 678
E + +++ ++ +N +I CK ++D + G PN + +M++G+
Sbjct: 489 EYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRK 548
Query: 679 GGKYTEVTELWGEMK 693
G K E L+ EMK
Sbjct: 549 GLK-EEADALFREMK 562
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 104/225 (46%), Gaps = 24/225 (10%)
Query: 514 MHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCY---EALLQSKIV 570
+HL G+ AS S SL K + + + + +L G+ A+ Y E L ++ ++
Sbjct: 5 VHL-GIVASQSKKMSLAKRFAQLRKASPLFSL------RGVYFSAASYDYREKLSRNALL 57
Query: 571 QKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRIDCGV 630
A+ LF EM +S+ P EF L+ A+ + L+ L E + RI +
Sbjct: 58 NLKLDDAIGLFGEMVQSR-PLPSIVEFNKLLSAIAKMKKFDLVISL-GERMQNLRISYDL 115
Query: 631 HDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWG 690
+ +N +I+ FC++ + A L +M LG+ P+ T S++ GY + ++ L
Sbjct: 116 YSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCH-SKRISDAVALVD 174
Query: 691 EMKSFASSTSMNFDEELLDSVLYTFVRGGFFA--RANEVVAMMEE 733
+M M + D+V + + G F +A+E VA++++
Sbjct: 175 QM------VEMGYKP---DTVTFNTLIHGLFLHNKASEAVALVDQ 210
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 129/640 (20%), Positives = 251/640 (39%), Gaps = 120/640 (18%)
Query: 99 NAINEHRYGDAWKLYEQHMQMDGFPRKTLVNKILTSFVESLDSKWLEKAYGLVEQAFEEG 158
NA+ + DA L+ + +Q P NK+L++ + K + LV E
Sbjct: 54 NALLNLKLDDAIGLFGEMVQSRPLPSIVEFNKLLSAIAKM-------KKFDLVISLGERM 106
Query: 159 KQILLEKEPLIY---LSLGLSKCGLPVPASTILRKLVATEQYPPVTAWSAIL---AHMSL 212
+ + + + Y ++ + LP+ A +L K++ P + S++L H
Sbjct: 107 QNLRISYDLYSYNILINCFCRRSQLPL-ALAVLGKMMKLGYEPDIVTLSSLLNGYCHSKR 165
Query: 213 TAPGAYLAAELILEIGYLFQDGRVDPRKKCNAPLIAMKPNTNTFNIALAGCLLFETTRKA 272
+ L +++ E+GY KP+T TFN + G L +A
Sbjct: 166 ISDAVALVDQMV-EMGY--------------------KPDTVTFNTLIHGLFLHNKASEA 204
Query: 273 EQLLDIMPRIGVKADSNLLIIMAHIYERNGRREE-------LRKLQRHIDEAVNLSDIQF 325
L+D M + G + D L+ + +R + L+K+++ EA D+
Sbjct: 205 VALVDQMVQRGCQPD---LVTYGAVVNGLCKRGDIDLALSLLKKMEKGKIEA----DVVI 257
Query: 326 RQFYNCLLSCHLKFGDLNSA----SKMVLEMLQRAKEARNSLAAAMLPFNAVGVNNRTPS 381
YN ++ K+ ++ A +KM + ++ NSL + + + +R S
Sbjct: 258 ---YNTIIDGLCKYKHIDDAFALFNKMETKGIRPDVFTYNSLISCLCNYGRWSDASRLLS 314
Query: 382 EQNVNCTNSVDLENSGIIENHILSYEDFTKDRKFVALEAEVKRVLQTLLGMLQKQVELIT 441
N + S +I+ F K+ K V EAE + M+++ ++
Sbjct: 315 NMIERKINPNVVTFSALIDA-------FVKEGKLV--EAE-----KLYDEMIKRSID--- 357
Query: 442 TEHGILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISL 501
P Y L+ F + E H L +S D +V+T +
Sbjct: 358 -------PDIFTYSSLINGFCMHDRLDEAKHMF------ELMISKD--CFPNVVTYNTLI 402
Query: 502 -GW-----LDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQ 555
G+ +++ +L EM G+ ++ Y +L++ +A + + S G+
Sbjct: 403 KGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVP 462
Query: 556 LDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAK 615
D Y LL AL +F+ +++SK+ + + ++++G + AG
Sbjct: 463 PDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYT-YNIMIEGMCK---AG---- 514
Query: 616 LLQEVKEGQRIDCG---------VHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQ 666
+V++G + C V + +I FC+K L ++A+ + M+ G LP++
Sbjct: 515 ---KVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPDSG 571
Query: 667 TFHSMVTGYAAIGGKYTEVTELWGEMKSF-----ASSTSM 701
+++++ G K EL EM+S AS+ SM
Sbjct: 572 CYNTLIRARLRDGDKAAS-AELIKEMRSCGFVGDASTISM 610
>gi|222615488|gb|EEE51620.1| hypothetical protein OsJ_32898 [Oryza sativa Japonica Group]
Length = 822
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/236 (22%), Positives = 100/236 (42%), Gaps = 12/236 (5%)
Query: 448 QPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENL---QVSHDDAALGHVITLCISLGWL 504
P + L+ G ++ HFL +A + L Q+S+ G + G L
Sbjct: 341 DPDIITFNTLITGLCHEGHVRKAEHFLREAIRRELNPNQLSYTPLIHGFCMR-----GEL 395
Query: 505 DQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEAL 564
A DLL EM G + +L+ + A + E + + D + Y L
Sbjct: 396 MAASDLLMEMMGRGHTPDVVTFGALIHGLVVAGKVSEALIVREKMTERQVFPDVNIYNVL 455
Query: 565 LQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVK-EG 623
+ + P A ++ +EM E + + + L+ G ++ G K+ + ++ +G
Sbjct: 456 ISGLCKKHMLPAAKNILEEMLEKNV-QPDEFVYATLIDGFIRSENLGDARKIFEFMEHKG 514
Query: 624 QRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIG 679
R D + N +I +C+ +M +A + MR +G +P+ T+ ++++GYA G
Sbjct: 515 VRPD--IVSCNAMIKGYCQFGMMSEAILCMSNMRKVGCIPDEFTYTTVISGYAKQG 568
>gi|410110111|gb|AFV61135.1| pentatricopeptide repeat-containing protein 123, partial [Lippia
duartei]
Length = 381
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/255 (20%), Positives = 117/255 (45%), Gaps = 25/255 (9%)
Query: 447 LQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQ---VSHDDAALGHVITLCISLGW 503
++P Y L++ + +A E H +++N++ V+++ + + TL
Sbjct: 140 IEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTL-----E 194
Query: 504 LDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEA 563
++A++L+ EM G+ +S Y++++ + + + L + RS+G+++D +
Sbjct: 195 HEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAXLFQKLRSSGVEID----QI 250
Query: 564 LLQSKIVQKDTPG----ALHLFKEMKE-SKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQ 618
L Q+ IV + G A L E+K IPR ++ G + EA + + Q
Sbjct: 251 LFQTMIVAYERAGLVAHAKRLLHELKRPDNIPRDTAIH---ILAGAGRIEEATYVFR--Q 305
Query: 619 EVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAI 678
+ G+ D V + +IH K + + + +MR LG+ P++ ++ Y +
Sbjct: 306 XIDAGEVKDITV--FERMIHLLSKYKKYSNVVEVFDKMRGLGYFPDSDVIAIVLNAYGKL 363
Query: 679 GGKYTEVTELWGEMK 693
++ + +++ EM+
Sbjct: 364 -QEFDKANDVYMEMQ 377
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/232 (22%), Positives = 107/232 (46%), Gaps = 25/232 (10%)
Query: 506 QAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALL 565
+A L+ EM AGV +++ Y++LL Y+E + E ++ + R LD + ++
Sbjct: 57 EARSLIGEMKTAGVMPNTTSYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMI 116
Query: 566 QSKIVQKDTPGALHLFKE-------MKESKI-PRSGHQEFEMLVKGCAQNH-EAGLMAKL 616
D G L + KE M++ I P + V G A+ EA + +L
Sbjct: 117 -------DVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRL 169
Query: 617 LQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYA 676
+Q + I+ V +N+++ + K + A ++ M+S G PN+ T+ ++++ +
Sbjct: 170 MQR----KNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWG 225
Query: 677 AIGGKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVV 728
+ GK L+ +++ S+ + D+ L +++ + R G A A ++
Sbjct: 226 KV-GKLDRAAXLFQKLR----SSGVEIDQILFQTMIVAYERAGLVAHAKRLL 272
>gi|357509703|ref|XP_003625140.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355500155|gb|AES81358.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 855
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 61/291 (20%), Positives = 127/291 (43%), Gaps = 13/291 (4%)
Query: 447 LQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQ 506
+P Y L+ A+ + K ++ ++ NL+ + + +I S G L+
Sbjct: 393 FRPDVVSYTSLLNAYGRSRKPQKAREIFKMIKRNNLK--PNIVSYNALIDAYGSNGLLED 450
Query: 507 AHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQ 566
A ++L EM + + +LL A + ++ +L A GI+L+ Y + +
Sbjct: 451 AIEILREMEQDKIHPNVVSICTLLAACGRCGQKVKIDTVLSAAEMRGIKLNTVAYNSAIG 510
Query: 567 SKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRI 626
S I + A+ L+ M++ KI +S + +L+ GC + + G ++E+ ++
Sbjct: 511 SYINVGEYDKAIDLYNSMRKKKI-KSDSVTYTVLISGCCKMSKFGEALSFMEEMMH-LKL 568
Query: 627 DCGVHDWNNVIHFFCKKR----LMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKY 682
++++I + K+ + +AE M+SLG P+ T+ +M+ Y A K+
Sbjct: 569 PMSKEVYSSIICAYSKQASALGQIIEAESTFNLMKSLGCSPDVVTYTAMLDAYNA-AEKW 627
Query: 683 TEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEE 733
++ L+ EM+ + D +++ F +GG R + M E
Sbjct: 628 EKLYALFEEME----ENDVKLDTIACAALMRAFNKGGQPGRVLSLAQSMRE 674
Score = 40.4 bits (93), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 48/246 (19%), Positives = 103/246 (41%), Gaps = 9/246 (3%)
Query: 507 AHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQ 566
A +++D+M A + S S Y +L+ A + +E + + G+ D + +L
Sbjct: 204 AMNIMDDMLRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNIMLT 263
Query: 567 SKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRI 626
+ AL F+ +K + I R +++ + + + +KE ++
Sbjct: 264 AFKSGTQYSKALSYFELIKGTHI-RPDTTTHNIIIHCLVKLKQYDKAVDIFNSMKE-KKS 321
Query: 627 DC--GVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTE 684
+C V + ++IH + +++ E A M + G PN ++++++ YAA G + E
Sbjct: 322 ECHPDVVTFTSMIHLYSVCGHIENCEAAFNMMLAEGLKPNIVSYNALLGAYAARGME-NE 380
Query: 685 VTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFIDKYKYR 744
+++ E+K D S+L + R +A E+ M++ + + Y
Sbjct: 381 ALQVFNEIK----QNGFRPDVVSYTSLLNAYGRSRKPQKAREIFKMIKRNNLKPNIVSYN 436
Query: 745 TLFLKY 750
L Y
Sbjct: 437 ALIDAY 442
>gi|297733858|emb|CBI15105.3| unnamed protein product [Vitis vinifera]
Length = 627
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 69/305 (22%), Positives = 124/305 (40%), Gaps = 24/305 (7%)
Query: 430 LGMLQKQVELIT-TEHGILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDD 488
L L+K EL+ E G P Y L++A ++G KE + + +
Sbjct: 58 LNRLEKVSELLKEMESGGSFPDITSYNVLLEAHAQSGSIKEAMGVF--RQMQGAGCVPNA 115
Query: 489 AALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRD 548
A ++ L G D DL EM ++ +++ Y L+ + E +EV L D
Sbjct: 116 ATYSILLNLYGRHGRYDDVRDLFLEMKVSNTEPNAATYNILINVFGEGGYFKEVVTLFHD 175
Query: 549 ARSAGIQLDASCYEALLQSKIVQKDTPGALH------LFKEMKESKIPRSGHQEFEMLVK 602
++ + YE L+ + G LH L ++ +P S +
Sbjct: 176 MVEENVEPNMETYEGLIFAC-----GKGGLHEDAKKILLHMNEKGVVPSSKAYTGVIEAY 230
Query: 603 GCAQNHEAGLMA-KLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGH 661
G A +E L+A + EV ++ +N++I F K L +++E L +M G
Sbjct: 231 GQAALYEEALVAFNTMNEVGSKPTVET----YNSLIQMFAKGGLYKESEAILLKMGQSGV 286
Query: 662 LPNAQTFHSMVTGYAAIGGKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFF 721
N TF+ ++ + GG++ E + + EM+ + DE+ L++VL + G
Sbjct: 287 ARNRDTFNGVIEAFRQ-GGQFEEAIKAYVEME----KARCDPDEQTLEAVLSVYCFAGLV 341
Query: 722 ARANE 726
+ E
Sbjct: 342 EESEE 346
Score = 53.1 bits (126), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 89/450 (19%), Positives = 165/450 (36%), Gaps = 73/450 (16%)
Query: 248 AMKPNTNTFNIALAGCLLFETTRKAEQLLDIMPRIGVKADSNLLIIMAHIYERNGRREEL 307
++ + T+N L+ C +AE + M G+ D + + + R E++
Sbjct: 5 GIQADIVTYNTLLSACARRGLGDEAEMVFRTMNEGGILPDITTYSYLVETFGKLNRLEKV 64
Query: 308 RKLQRHIDEAVNLSDIQFRQFYNCLLSCHLKFGDLNSASKMVLEMLQRAKEARNSLAAAM 367
+L + ++ + DI YN LL H + G + A V +Q A N+ ++
Sbjct: 65 SELLKEMESGGSFPDITS---YNVLLEAHAQSGSIKEAMG-VFRQMQGAGCVPNAATYSI 120
Query: 368 LPFNAVGVNNRTPSEQNVNCTNSVDLENSGIIENHILSYEDFTKDRKFVALEAEVKRVLQ 427
L N G + R Y+D + + LE +V
Sbjct: 121 L-LNLYGRHGR---------------------------YDDV----RDLFLEMKVSNT-- 146
Query: 428 TLLGMLQKQVELITTEHGILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHD 487
+P Y L+ F E G KE+ +EN++ + +
Sbjct: 147 --------------------EPNAATYNILINVFGEGGYFKEVVTLFHDMVEENVEPNME 186
Query: 488 DAALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLR 547
+I C G + A +L M+ GV SS Y +++AY +A E
Sbjct: 187 --TYEGLIFACGKGGLHEDAKKILLHMNEKGVVPSSKAYTGVIEAYGQAALYEEALVAFN 244
Query: 548 DARSAGIQLDASCYEALLQSKIVQKDTPGALH-----LFKEMKESKIPRSGHQEFEMLVK 602
G + Y +L +Q G L+ + +M +S + R+ F +++
Sbjct: 245 TMNEVGSKPTVETYNSL-----IQMFAKGGLYKESEAILLKMGQSGVARN-RDTFNGVIE 298
Query: 603 GCAQNHEAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHL 662
Q + K E+ E R D V+ +C L++++E+ +++LG L
Sbjct: 299 AFRQGGQFEEAIKAYVEM-EKARCDPDEQTLEAVLSVYCFAGLVEESEEQFGEIKALGIL 357
Query: 663 PNAQTFHSMVTGYAAIGGKYTEVTELWGEM 692
P+ + M+ YA ++ + +L EM
Sbjct: 358 PSVMCYCMMLAVYAK-ADRWDDAHQLLDEM 386
>gi|410110107|gb|AFV61133.1| pentatricopeptide repeat-containing protein 123, partial [Lippia
brasiliensis]
Length = 382
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/255 (20%), Positives = 117/255 (45%), Gaps = 25/255 (9%)
Query: 447 LQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQ---VSHDDAALGHVITLCISLGW 503
++P Y L++ + +A E H +++N++ V+++ + + TL
Sbjct: 141 IEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMIMIYGKTL-----E 195
Query: 504 LDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEA 563
++A++L+ EM G+ +S Y++++ + + + L + RS+G+++D +
Sbjct: 196 HEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEID----QI 251
Query: 564 LLQSKIVQKDTPG----ALHLFKEMKE-SKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQ 618
L Q+ IV + G A L E+K IPR ++ G + EA + + Q
Sbjct: 252 LFQTMIVAYERAGLVAHAKRLLHELKRPDNIPRDTAIH---ILAGAGRIEEATYVFR--Q 306
Query: 619 EVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAI 678
+ G+ D V + +IH K + + + +MR LG+ P++ ++ Y +
Sbjct: 307 AIDAGEVKDITV--FERMIHLLSKYKKYXNVVEVFDKMRGLGYFPDSNVIAVVLNAYGKL 364
Query: 679 GGKYTEVTELWGEMK 693
++ + +++ EM+
Sbjct: 365 -QEFDKANDVYMEMQ 378
Score = 46.2 bits (108), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 53/269 (19%), Positives = 113/269 (42%), Gaps = 38/269 (14%)
Query: 493 HVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSA 552
++I L L +A + + +G Y +++ + +A RE +L+ + ++A
Sbjct: 10 NLIELSRKLCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMKTA 69
Query: 553 GIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESK-------------------IPRSG 593
G+ + + Y LL + K AL +F EM+E K + +
Sbjct: 70 GVMPNTTSYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEA 129
Query: 594 HQEFEMLVK-GCAQN-----------HEAGLMAKLLQEVKEGQR--IDCGVHDWNNVIHF 639
+ F + K G N +A L + + + QR I+ V +N++I
Sbjct: 130 DKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMIMI 189
Query: 640 FCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEMKSFASST 699
+ K + A ++ M+S G PN+ T+ ++++ + + GK L+ +++ S+
Sbjct: 190 YGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKV-GKLDRAAMLFQKLR----SS 244
Query: 700 SMNFDEELLDSVLYTFVRGGFFARANEVV 728
+ D+ L +++ + R G A A ++
Sbjct: 245 GVEIDQILFQTMIVAYERAGLVAHAKRLL 273
>gi|47550658|dbj|BAD20284.1| hypothetical protein [Oryza sativa Indica Group]
Length = 791
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 70/338 (20%), Positives = 129/338 (38%), Gaps = 50/338 (14%)
Query: 433 LQKQVELITT--EHGILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAA 490
+ K +E++TT ++G++ P Y ++ + + + KE FL K + V D
Sbjct: 247 MDKAMEVLTTMVKNGVM-PNCMTYNSILHGYCSSEQPKEAIGFLKKMRSDG--VEPDVVT 303
Query: 491 LGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDAR 550
++ G +A + D M G+ + Y +LL+ Y E+ ALL
Sbjct: 304 YNSLMDYLCKNGRSTEARKIFDSMTKRGLEPDIATYCTLLQGYATKGALVEMHALLDLMV 363
Query: 551 SAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEA 610
GI D + L+ + Q+ A+ +F +M++ + + ++ C
Sbjct: 364 RNGIHPDHHVFNILICAYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVD 423
Query: 611 GLMAKLLQEVKEGQRID-----------CGVHDW----------------------NNVI 637
M Q + EG + C W N++I
Sbjct: 424 DAMLYFEQMIDEGLTPNIIVYTSLIHSLCIFDKWDKAEELILEMLDRGICLNTIFFNSII 483
Query: 638 HFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEMKSFAS 697
H CK+ + ++EK M +G PN T+ +++ GY + GK E T+L M S
Sbjct: 484 HSHCKEGRVIESEKLFDLMVRIGVKPNVITYSTLIDGY-CLAGKMDEATKLLSSMFSVGM 542
Query: 698 STSMNFDEELLDSVLYTFVRGGF--FARANEVVAMMEE 733
D V Y + G+ +R ++ +A+ +E
Sbjct: 543 KP---------DCVTYNTLINGYCRVSRMDDALALFKE 571
Score = 52.8 bits (125), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 50/225 (22%), Positives = 93/225 (41%), Gaps = 6/225 (2%)
Query: 449 PTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQAH 508
P Y ++ F + G + + + E + ++S D +I +D+A
Sbjct: 194 PDVVSYTTVINGFFKEGDSDK--AYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAM 251
Query: 509 DLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSK 568
++L M GV + Y S+L Y + +P+E L+ RS G++ D Y +L+
Sbjct: 252 EVLTTMVKNGVMPNCMTYNSILHGYCSSEQPKEAIGFLKKMRSDGVEPDVVTYNSLMDYL 311
Query: 569 IVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQ-EVKEGQRID 627
+ A +F M + + + L++G A M LL V+ G D
Sbjct: 312 CKNGRSTEARKIFDSMTKRGL-EPDIATYCTLLQGYATKGALVEMHALLDLMVRNGIHPD 370
Query: 628 CGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMV 672
H +N +I + K+ + +A +MR G PN T+ +++
Sbjct: 371 --HHVFNILICAYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVI 413
Score = 47.4 bits (111), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 51/237 (21%), Positives = 99/237 (41%), Gaps = 17/237 (7%)
Query: 502 GWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCY 561
G +D+A LL M G++ Y +L+ Y +R + AL ++ S+G+ + Y
Sbjct: 525 GKMDEATKLLSSMFSVGMKPDCVTYNTLINGYCRVSRMDDALALFKEMVSSGVSPNIITY 584
Query: 562 EALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQ----EFEMLVKGCAQNHEAGLMAKLL 617
+LQ + T A L+ I +SG Q + +++ G +N+ ++
Sbjct: 585 NIILQGLFHTRRTAAAKELY-----VGITKSGTQLELSTYNIILHGLCKNNLTDEALRMF 639
Query: 618 QEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAA 677
Q + + +N +I K +A+ S G +PN T+ M
Sbjct: 640 QNLCLTD-LQLETRTFNIMIGALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAEN--I 696
Query: 678 IG-GKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEE 733
IG G E+ +L+ M+ + D +L+ ++ ++ G RA ++M++E
Sbjct: 697 IGQGLLEELDQLFFSMEDNGCTV----DSGMLNFIVRELLQRGEITRAGTYLSMIDE 749
Score = 42.7 bits (99), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 42/189 (22%), Positives = 75/189 (39%), Gaps = 4/189 (2%)
Query: 492 GHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPRE-VTALLRDAR 550
G +I C G LD L + G R + + LLK R + + +LR
Sbjct: 91 GILIGCCCRAGRLDLGFAALGNVVKKGFRVEAITFTPLLKGLCADKRTSDAMDIVLRRMT 150
Query: 551 SAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQ--EFEMLVKGCAQNH 608
D LL+ + + AL L M + + S + ++ G +
Sbjct: 151 ELSCMPDVFSCTILLKGLCDENRSQEALELLHMMADDRGGGSAPDVVSYTTVINGFFKEG 210
Query: 609 EAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTF 668
++ E+ + +RI V ++++I CK + M A + L M G +PN T+
Sbjct: 211 DSDKAYSTYHEMLD-RRISPDVVTYSSIIAALCKGQAMDKAMEVLTTMVKNGVMPNCMTY 269
Query: 669 HSMVTGYAA 677
+S++ GY +
Sbjct: 270 NSILHGYCS 278
>gi|410110087|gb|AFV61123.1| pentatricopeptide repeat-containing protein 123, partial [Lantana
urticoides]
Length = 423
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/255 (20%), Positives = 117/255 (45%), Gaps = 25/255 (9%)
Query: 447 LQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQ---VSHDDAALGHVITLCISLGW 503
++P Y L++ + +A E H +++N++ V+++ + + TL
Sbjct: 170 IEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMIMIYGKTL-----E 224
Query: 504 LDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEA 563
++A++L+ EM G+ +S Y++++ + + + L + RS+G+++D +
Sbjct: 225 HEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEID----QI 280
Query: 564 LLQSKIVQKDTPG----ALHLFKEMKE-SKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQ 618
L Q+ IV + G A L E+K IPR ++ G + EA + + Q
Sbjct: 281 LFQTMIVAYERAGLVAHAKRLLHELKRPDNIPRDTAIH---ILAGAGRIEEATYVFR--Q 335
Query: 619 EVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAI 678
+ G+ D V + +IH K + + + +MR LG+ P++ ++ Y +
Sbjct: 336 AIDAGEVKDITV--FERMIHLLSKYKKYSNVVEVFDKMRGLGYFPDSNVIAVVLNAYGKL 393
Query: 679 GGKYTEVTELWGEMK 693
++ + +++ EM+
Sbjct: 394 -QEFDKANDVYMEMQ 407
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 63/308 (20%), Positives = 128/308 (41%), Gaps = 40/308 (12%)
Query: 454 YIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQAHDLLDE 513
Y L+ F + G +L K E++ QV D ++I L L +A +
Sbjct: 2 YSTLITHFGKEGLFDAALSWLQKMEQD--QVPGDLVLYSNLIELSRKLCDYSKAISIFSR 59
Query: 514 MHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQKD 573
+ +G Y +++ + +A RE +L+ + ++AG+ + + Y LL + K
Sbjct: 60 LKSSGFTPDLVAYNAMINVFGKAKLFREARSLISEMKTAGVMPNTTSYSTLLTMYVENKK 119
Query: 574 TPGALHLFKEMKESK-------------------IPRSGHQEFEMLVK-GCAQN------ 607
AL +F EM+E K + + + F + K G N
Sbjct: 120 FLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNT 179
Query: 608 -----HEAGLMAKLLQEVKEGQR--IDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLG 660
+A L + + + QR I+ V +N++I + K + A ++ M+S G
Sbjct: 180 LLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMIMIYGKTLEHEKANNLIQEMQSRG 239
Query: 661 HLPNAQTFHSMVTGYAAIGGKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGF 720
PN+ T+ ++++ + + GK L+ +++ S+ + D+ L +++ + R G
Sbjct: 240 IEPNSITYSTIISIWGKV-GKLDRAAMLFQKLR----SSGVEIDQILFQTMIVAYERAGL 294
Query: 721 FARANEVV 728
A A ++
Sbjct: 295 VAHAKRLL 302
>gi|224108788|ref|XP_002314968.1| predicted protein [Populus trichocarpa]
gi|222864008|gb|EEF01139.1| predicted protein [Populus trichocarpa]
Length = 662
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 63/261 (24%), Positives = 106/261 (40%), Gaps = 14/261 (5%)
Query: 493 HVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSA 552
HV+ +S + + + M G+ + Y LLKA + +R LL +
Sbjct: 148 HVLDALLSENKFQMINGIYNNMKRDGIELNVYTYNMLLKALCKNDRVDAARKLLAEMSYK 207
Query: 553 GIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGL 612
G DA Y ++ S A L +K S +P + L+ G + H+
Sbjct: 208 GCIPDAVSYTTVVSSMCRLGKVEEARELSMRIK-SFVPV-----YNALINGFCREHKMEE 261
Query: 613 MAKLLQEVK-EGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSM 671
+ +L E+ EG ID V ++ VI+ + ++ A L +M G PN TF S+
Sbjct: 262 VFELFNEMAVEG--IDPDVITYSTVINTLSEMGNVEMALAVLAKMFLRGCSPNVHTFTSL 319
Query: 672 VTGYAAIGGKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMM 731
+ GY +GG+ E +LW M S + +++++ G A V M
Sbjct: 320 MKGY-FMGGRLCEALDLWNRMIQEGSEP----NTVAYNTLIHGLCSYGKMVEAVSVSQKM 374
Query: 732 EEGKMFIDKYKYRTLFLKYHK 752
E +F ++ Y TL + K
Sbjct: 375 ERNGVFPNETTYSTLIDGFAK 395
Score = 49.3 bits (116), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 46/210 (21%), Positives = 87/210 (41%), Gaps = 16/210 (7%)
Query: 487 DDAALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALL 546
D + V++ LG +++A +L M +++ VY +L+ + ++ EV L
Sbjct: 212 DAVSYTTVVSSMCRLGKVEEAREL--SMR---IKSFVPVYNALINGFCREHKMEEVFELF 266
Query: 547 RDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQ 606
+ GI D Y ++ + + AL + +M + H F L+KG
Sbjct: 267 NEMAVEGIDPDVITYSTVINTLSEMGNVEMALAVLAKMFLRGCSPNVHT-FTSLMKGYFM 325
Query: 607 N----HEAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHL 662
L +++QE E + +N +IH C M +A ++M G
Sbjct: 326 GGRLCEALDLWNRMIQEGSEPNTVA-----YNTLIHGLCSYGKMVEAVSVSQKMERNGVF 380
Query: 663 PNAQTFHSMVTGYAAIGGKYTEVTELWGEM 692
PN T+ +++ G+A G +E+W +M
Sbjct: 381 PNETTYSTLIDGFAK-AGDLVGASEIWNKM 409
Score = 42.7 bits (99), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 52/255 (20%), Positives = 98/255 (38%), Gaps = 15/255 (5%)
Query: 502 GWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCY 561
G L +A DL + M G ++ Y +L+ + E ++ + G+ + + Y
Sbjct: 327 GRLCEALDLWNRMIQEGSEPNTVAYNTLIHGLCSYGKMVEAVSVSQKMERNGVFPNETTY 386
Query: 562 EALLQSKIVQKDTPGALHLFKEM-KESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEV 620
L+ D GA ++ +M +P + +V +N L++ +
Sbjct: 387 STLIDGFAKAGDLVGASEIWNKMITNGCLPNV--VVYTCMVDVLCRNSMFNHALHLIENM 444
Query: 621 KEGQRIDC--GVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAI 678
G +C +N I C + A K L +MR G PN T++ ++ G
Sbjct: 445 ANG---NCPPNTITFNTFIKGLCCSGKTEWAMKVLNQMRQYGCAPNVTTYNEVLDGL--F 499
Query: 679 GGKYT-EVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMF 737
K T E ++ GE++ +++ +++L F G F A ++ + G
Sbjct: 500 NAKRTREALQIVGEIEEMEIKSNL----VTYNTILSGFCHAGMFKGALQIAGKLLVGGTK 555
Query: 738 IDKYKYRTLFLKYHK 752
D Y T+ Y K
Sbjct: 556 PDSITYNTVIYAYCK 570
>gi|449436014|ref|XP_004135789.1| PREDICTED: pentatricopeptide repeat-containing protein At1g07740,
mitochondrial-like [Cucumis sativus]
Length = 460
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 77/178 (43%), Gaps = 3/178 (1%)
Query: 502 GWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCY 561
GW +QA +L DEM GV+ S Y S L L ++ G +A Y
Sbjct: 201 GW-EQACNLFDEMLEKGVQPSVVTYNSFLGVLCRKGEMDTALCLFKNMTEKGHHPNAVTY 259
Query: 562 EALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVK 621
L++ A L +M E + + +L+ + M LL E+K
Sbjct: 260 ALLMEGWCFIGKYKEAKKLMFDM-EFHGCKLRPVNYGVLMTHLGKTGNIDEMESLLNEMK 318
Query: 622 EGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIG 679
+ +R+ V +N ++++ CK+ + DA K L +M+ G PNA T+ M+ GY G
Sbjct: 319 K-RRLKPDVVTYNILVNYLCKEGKVGDAYKVLVKMQVGGCDPNAATYRMMIDGYCNAG 375
Score = 43.1 bits (100), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 51/230 (22%), Positives = 96/230 (41%), Gaps = 8/230 (3%)
Query: 447 LQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQ--VSHDDAALGHVITLCISLGWL 504
+P Y ++K +++ G ++ + + ++ +Q V ++ LG LC G +
Sbjct: 182 FRPNSVSYNIMIKGWIKKGGWEQACNLFDEMLEKGVQPSVVTYNSFLG---VLCRK-GEM 237
Query: 505 DQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEAL 564
D A L M G ++ YA L++ + + +E L+ D G +L Y L
Sbjct: 238 DTALCLFKNMTEKGHHPNAVTYALLMEGWCFIGKYKEAKKLMFDMEFHGCKLRPVNYGVL 297
Query: 565 LQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQ 624
+ + L EMK+ ++ + + +LV + + G K+L +++ G
Sbjct: 298 MTHLGKTGNIDEMESLLNEMKKRRL-KPDVVTYNILVNYLCKEGKVGDAYKVLVKMQVGG 356
Query: 625 RIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTG 674
D + +I +C A K L M GH P+ +TF S+V G
Sbjct: 357 -CDPNAATYRMMIDGYCNAGDFDGAMKILNAMLMSGHYPHLKTFASLVVG 405
>gi|410110141|gb|AFV61150.1| pentatricopeptide repeat-containing protein 123, partial [Lippia
turbinata]
Length = 441
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 53/255 (20%), Positives = 117/255 (45%), Gaps = 25/255 (9%)
Query: 447 LQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQ---VSHDDAALGHVITLCISLGW 503
++P Y L++ + +A E H +++N++ V+++ + + TL
Sbjct: 187 IEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTL-----E 241
Query: 504 LDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEA 563
++A++L+ EM GV +S Y++++ + + + L + RS+G+++D +
Sbjct: 242 HEKANNLIQEMQSRGVEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEID----QI 297
Query: 564 LLQSKIVQKDTPG----ALHLFKEMKE-SKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQ 618
L Q+ IV + G A L E+K IPR ++ G + EA + + Q
Sbjct: 298 LFQTMIVAYERAGLVAHAKRLLHELKRPDNIPRDTAIH---ILAGAGRIEEATYVFR--Q 352
Query: 619 EVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAI 678
+ G+ D V + +IH K + + + +MR LG+ P++ ++ Y +
Sbjct: 353 AIDAGEVKDITV--FERMIHLLSKYKKYSNVIEVFDKMRGLGYFPDSDVIAIVLNAYGKL 410
Query: 679 GGKYTEVTELWGEMK 693
++ + +++ EM+
Sbjct: 411 -QEFDKANDVYMEMQ 424
Score = 52.8 bits (125), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 64/315 (20%), Positives = 130/315 (41%), Gaps = 40/315 (12%)
Query: 447 LQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQ 506
L P Y L+ F + G +L K E++ QV D ++I L L +
Sbjct: 12 LSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQD--QVPGDLVLYSNLIELSRKLCDYSK 69
Query: 507 AHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQ 566
A + + +G Y +++ + +A RE +L+ + ++AG+ + + Y LL
Sbjct: 70 AISIFSRLKXSGFXPDLVAYNAMINVFGKAKLFREARSLISEMKTAGVMPNTTSYSTLLT 129
Query: 567 SKIVQKDTPGALHLFKEMKESK-------------------IPRSGHQEFEMLVK-GCAQ 606
+ K AL +F EM+E K + + + F + K G
Sbjct: 130 MYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEP 189
Query: 607 N-----------HEAGLMAKLLQEVKEGQR--IDCGVHDWNNVIHFFCKKRLMQDAEKAL 653
N +A L + + + QR I+ V +N+++ + K + A +
Sbjct: 190 NVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLI 249
Query: 654 KRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEMKSFASSTSMNFDEELLDSVLY 713
+ M+S G PN+ T+ ++++ + + GK L+ +++ S+ + D+ L +++
Sbjct: 250 QEMQSRGVEPNSITYSTIISIWGKV-GKLDRAAMLFQKLR----SSGVEIDQILFQTMIV 304
Query: 714 TFVRGGFFARANEVV 728
+ R G A A ++
Sbjct: 305 AYERAGLVAHAKRLL 319
>gi|357499677|ref|XP_003620127.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495142|gb|AES76345.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 412
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 53/252 (21%), Positives = 109/252 (43%), Gaps = 15/252 (5%)
Query: 502 GWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCY 561
G + +A ++L M G+ ++ Y+SL+ Y N + G+ + Y
Sbjct: 149 GNVKEAKNVLAMMMKQGINPNAVTYSSLMDGYCLVNEVNNAKGIFSTMSLRGVTANVWSY 208
Query: 562 EALLQSKIVQKDTPGALHLFKEMKESK-IPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEV 620
++ K T A++LF+EM K IP + L+ G ++ + KL+ E+
Sbjct: 209 NIMINGFCKIKMTDEAMNLFEEMHCRKLIPDV--VTYNSLINGLCKSGKISYALKLVDEM 266
Query: 621 KE-GQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIG 679
+ GQ D + +++++ CK + A LK ++ G PN T+ ++ G G
Sbjct: 267 HDRGQPPD--IITYSSLLDALCKNHQVDKAIALLKNLKDQGIRPNMYTYTILIDGLCK-G 323
Query: 680 GKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFID 739
G+ + ++ ++ + ++N +++ F G F A +++ M++ F +
Sbjct: 324 GRLEDAHNIFEDLLVKGYNITVN----TYTVMIHGFCNKGLFDEALALLSKMKDNSCFPN 379
Query: 740 KYKY----RTLF 747
Y R+LF
Sbjct: 380 ALTYEIIIRSLF 391
>gi|302767746|ref|XP_002967293.1| hypothetical protein SELMODRAFT_87828 [Selaginella moellendorffii]
gi|300165284|gb|EFJ31892.1| hypothetical protein SELMODRAFT_87828 [Selaginella moellendorffii]
Length = 321
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 80/191 (41%), Gaps = 7/191 (3%)
Query: 506 QAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALL 565
+A+ ++ M GV + Y L+ + + + +L++ G + + Y L
Sbjct: 63 EAYGFIETMRSMGVSPTIVTYNLLIDGFCKEEKLHRALEILQEMTGRGHEPNHVTYNTFL 122
Query: 566 QSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQR 625
AL LF+ M E KI R + L+ G Q AG +A+ + E +
Sbjct: 123 HGLCKYGKVDDALALFRAMTEKKI-RLDVYGYTTLIDGLCQ---AGKLAEAYSLLDEMEN 178
Query: 626 IDCGVHD--WNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYT 683
C +N ++ + CK + +A K KRM G LP+ TF MV GY G +
Sbjct: 179 SGCVPKPGCYNAILSWLCKGSRINEAHKLFKRMTGSGILPDWLTFGMMVFGYCR-GHRID 237
Query: 684 EVTELWGEMKS 694
+ L +MKS
Sbjct: 238 DALLLLQQMKS 248
>gi|224111844|ref|XP_002316000.1| predicted protein [Populus trichocarpa]
gi|222865040|gb|EEF02171.1| predicted protein [Populus trichocarpa]
Length = 745
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 72/375 (19%), Positives = 149/375 (39%), Gaps = 72/375 (19%)
Query: 328 FYNCLLSCHLKFGDLNSASKMVLEMLQRAKEARNSLAAAMLPFNAVGVNNRTPSEQNVNC 387
YN ++ ++K GD+ A ++ + +A + +++ FN+
Sbjct: 433 LYNIMIDGYVKLGDVEEAVRLYKRLRDKA------ITPSIVTFNS--------------- 471
Query: 388 TNSVDLENSGIIENHILSYEDFTKDRKFVALEAEVKRVLQTLLGMLQKQVELITTEHGIL 447
L Y F K+RK V E +R+L+++ HG L
Sbjct: 472 ----------------LIY-GFCKNRKVV----EARRLLESI------------KLHG-L 497
Query: 448 QPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGW---- 503
+P+ Y L+ A+ E G +L L++ ++++ + V+T + +
Sbjct: 498 EPSAVTYTTLMNAYCEEGNINKLHELLLEMNLKDIEPT--------VVTYTVVIKGLCKQ 549
Query: 504 --LDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCY 561
L+++ LL++M G+ Y ++++ + +A R+ LL D ++ + Y
Sbjct: 550 RKLEESVQLLEDMRAKGLAPDQITYNTIIQCFCKAKDMRKAFELLDDMLIHNLEPTPATY 609
Query: 562 EALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVK 621
L+ D A + +++ I + M+ C + + Q V+
Sbjct: 610 NVLIDGLCRYGDVEDADRVLVSLQDRNINLTKVAYTTMIKAHCVKGDAQRAVKVFHQMVE 669
Query: 622 EGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGK 681
+G + + D++ VI+ CK+ L+ +A+ M S G P+ + F M+ + G
Sbjct: 670 KG--FEVSIKDYSAVINRLCKRCLINEAKYYFCIMLSDGVSPDQEIFEMMLNAFHRAGHV 727
Query: 682 YTEVTELWGEMKSFA 696
++ V EL M F
Sbjct: 728 HS-VFELLAVMIKFG 741
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 70/309 (22%), Positives = 128/309 (41%), Gaps = 23/309 (7%)
Query: 416 VALEAEVKRVLQTLLGMLQKQVELITTEHGILQPTEKIYIKLVKAFLEAGKTKELTHFLI 475
V+ + R + L + K + ++GIL P Y L+ + AG +E
Sbjct: 186 VSFNTIMSRYCKLGLADVAKSFFCMMLKYGIL-PDTYSYNILIHGLIVAGSMEEALELTN 244
Query: 476 KAEKENLQ---VSHDDAALGHVITLCISLGWLDQAHDLLDEMHL-AGVRASSSVYASLLK 531
EK+ LQ V++ A G + LG + A +++ +M G++ Y L+
Sbjct: 245 DMEKQGLQPDMVTYKIVAKGFHL-----LGLMSGAREIIQKMLTDEGLKPDLVTYTVLIC 299
Query: 532 AYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPR 591
+ + E L RD S+G QL+ Y LL S + AL L EM+ + + +
Sbjct: 300 GHCQMGNIEEALRLRRDLLSSGFQLNVILYSVLLSSLCKRGQVDEALQLLYEMEANNL-Q 358
Query: 592 SGHQEFEMLVKG-CAQNHEAGLMAKLLQEVKEG--QRIDCGVHDWNNVIHFFCKKRLMQD 648
+ +L+ G C Q G + + +Q KE RI + ++ C+K ++ D
Sbjct: 359 PDLVTYSILIHGLCKQ----GKVQQAIQLYKEMCFNRIFPNSFAHSGILKGLCEKGMLSD 414
Query: 649 AEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEMKSFASSTSMNFDEELL 708
A + P+ ++ M+ GY + G E L+ ++ A + S+
Sbjct: 415 ARMYFDSLIMSNLRPDVTLYNIMIDGYVKL-GDVEEAVRLYKRLRDKAITPSI----VTF 469
Query: 709 DSVLYTFVR 717
+S++Y F +
Sbjct: 470 NSLIYGFCK 478
>gi|359488050|ref|XP_002263119.2| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
mitochondrial-like [Vitis vinifera]
Length = 686
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 65/285 (22%), Positives = 111/285 (38%), Gaps = 25/285 (8%)
Query: 447 LQPTEKIYIKLVKAFLEAGK---TKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGW 503
+ P ++ +V A + G ++ +IK E V++ GH +
Sbjct: 356 IMPNVVVFSTVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLR-----SE 410
Query: 504 LDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEA 563
+D+A + D M G + Y L+ Y + R + LL G+ D Y
Sbjct: 411 MDEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNT 470
Query: 564 LLQSKIVQKDTPGALHLFKEMKES-KIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKE 622
L+ A+ LF EM S +IP + +L+ +NH LL+ + E
Sbjct: 471 LIHGLCHVGRLQHAIALFHEMVASGQIPDL--VTYRILLDYLCKNHHLAEAMVLLKAI-E 527
Query: 623 GQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKY 682
G +D + +N I C+ ++ A + S G P+ +T++ M+ G G
Sbjct: 528 GSNLDADILVYNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVRTYNIMIHGLCK-RGLL 586
Query: 683 TEVTELWGEMKSFASSTSMNFDEELLDSVLY-TFVRGGFFARANE 726
E +L+ +M S D +Y T +RG F R+NE
Sbjct: 587 DEANKLFRKMDENGCSR---------DGCIYNTIIRG--FLRSNE 620
>gi|449520325|ref|XP_004167184.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Cucumis sativus]
Length = 605
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 56/264 (21%), Positives = 105/264 (39%), Gaps = 11/264 (4%)
Query: 489 AALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRD 548
++ H+++ + Q L ++M L+G+ + LL NR RE A
Sbjct: 70 SSFNHLLSGLAKIKHYSQVFSLYNQMRLSGLSSDRCTLNILLNCLCNVNRLREGFAAFAG 129
Query: 549 ARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNH 608
G + Y L++ ++ A LF M++ + L+KG
Sbjct: 130 ILRRGYSPNIVTYNTLIKGLCMEHRISEATRLFLRMQKLGC-TPDVVTYGTLIKGLCGTG 188
Query: 609 EAGLMAKLLQEVKEG---QRIDC--GVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLP 663
+ KL QE+ I+C V +N ++ CK +A++ + M++ G +P
Sbjct: 189 NINIALKLHQEMLNDISRYEINCKPNVITYNIIVDGLCKVGREDEAKQLFEEMKTQGMIP 248
Query: 664 NAQTFHSMVTGYAAIGGKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFAR 723
+ +++S++ G+ GK+ E L EM M L+D T + G
Sbjct: 249 SIISYNSLIHGFCC-AGKWEESKRLLDEMLDQGLQPDMVTFNVLID----TLCKEGKVIE 303
Query: 724 ANEVVAMMEEGKMFIDKYKYRTLF 747
A +++ +M E + D Y +L
Sbjct: 304 AKKLLGVMIESGIVPDLVTYNSLI 327
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 57/257 (22%), Positives = 108/257 (42%), Gaps = 14/257 (5%)
Query: 440 ITTEHGILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQ---VSHDDAALGHVIT 496
+ E GI+ P Y L++ F G + + + +S++ G+ T
Sbjct: 310 VMIESGIV-PDLVTYNSLIEGFCMVGDLNSARELFVSMPSKGCEPDVISYNVLINGYSKT 368
Query: 497 LCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQL 556
L +++A L +EM L G R + Y SLLK A + + L ++ GI
Sbjct: 369 L-----KVEEAMKLYNEMLLVGKRPNVITYDSLLKGIFLAGKVDDAKKLFSVMKAHGIAE 423
Query: 557 DASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKL 616
++ Y L A+ LF E+K S + + L+ G + + +L
Sbjct: 424 NSYTYGIFLDGLCKNDCLFEAMKLFTELKSSNF-KLEIENLNCLIDGLCKAGKLETAWEL 482
Query: 617 LQEV-KEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGY 675
+++ EG + V + +IH FC++ + A +++M + G P+ T+++++ G+
Sbjct: 483 FEKLSNEGHEPN--VVTYTIMIHGFCREGQVDKANVLIQKMEANGCTPDIITYNTLMRGF 540
Query: 676 AAIGGKYTEVTELWGEM 692
K EV +L M
Sbjct: 541 YE-SNKLEEVVQLLHRM 556
Score = 48.9 bits (115), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 51/236 (21%), Positives = 95/236 (40%), Gaps = 10/236 (4%)
Query: 447 LQPTEKIYIKLVKAFLEAGKT---KELTHFLIKAEKENLQVSHDDAALGHVITLCISLGW 503
LQP + L+ + GK K+L +I++ V+++ G + +G
Sbjct: 281 LQPDMVTFNVLIDTLCKEGKVIEAKKLLGVMIESGIVPDLVTYNSLIEGFCM-----VGD 335
Query: 504 LDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEA 563
L+ A +L M G Y L+ Y + + E L + G + + Y++
Sbjct: 336 LNSARELFVSMPSKGCEPDVISYNVLINGYSKTLKVEEAMKLYNEMLLVGKRPNVITYDS 395
Query: 564 LLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEG 623
LL+ + A LF MK I + + + + + G +N KL E+K
Sbjct: 396 LLKGIFLAGKVDDAKKLFSVMKAHGIAENSYT-YGIFLDGLCKNDCLFEAMKLFTELKSS 454
Query: 624 QRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIG 679
+ + N +I CK ++ A + +++ + GH PN T+ M+ G+ G
Sbjct: 455 N-FKLEIENLNCLIDGLCKAGKLETAWELFEKLSNEGHEPNVVTYTIMIHGFCREG 509
Score = 45.1 bits (105), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 86/199 (43%), Gaps = 6/199 (3%)
Query: 497 LCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQL 556
LC +G D+A L +EM G+ S Y SL+ + A + E LL + G+Q
Sbjct: 225 LC-KVGREDEAKQLFEEMKTQGMIPSIISYNSLIHGFCCAGKWEESKRLLDEMLDQGLQP 283
Query: 557 DASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKL 616
D + L+ + + A L M ES I + L++G + +L
Sbjct: 284 DMVTFNVLIDTLCKEGKVIEAKKLLGVMIESGI-VPDLVTYNSLIEGFCMVGDLNSAREL 342
Query: 617 LQEV-KEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGY 675
+ +G D V +N +I+ + K +++A K M +G PN T+ S++ G
Sbjct: 343 FVSMPSKGCEPD--VISYNVLINGYSKTLKVEEAMKLYNEMLLVGKRPNVITYDSLLKG- 399
Query: 676 AAIGGKYTEVTELWGEMKS 694
+ GK + +L+ MK+
Sbjct: 400 IFLAGKVDDAKKLFSVMKA 418
>gi|449487636|ref|XP_004157725.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At1g19290-like [Cucumis
sativus]
Length = 885
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 100/441 (22%), Positives = 181/441 (41%), Gaps = 44/441 (9%)
Query: 250 KPNTNTFNIALAGCLLFETTRKAEQLLDIMPRIGVKADSNLLIIMAHIYERNGRREELRK 309
+P+ ++NI + L + A LL++M G K + + + G E RK
Sbjct: 289 EPDVYSYNIVINANCLKGQSSYALHLLNLMIENGCKPSIATFCTIIDAFCKEGNVELARK 348
Query: 310 LQRHIDEAVNLSDIQFRQFYNCLLSCHLKFGDLNSASKMVLEMLQRAKEARNSLAAAMLP 369
+ DE ++ Q YN ++S ++K D++ A+ + EM R K+ + +
Sbjct: 349 ---YFDEIEDMGLSQNTIVYNIMISGYVKARDISQANLLFEEM--RTKD----IVPDGIT 399
Query: 370 FNA-VGVNNRTPSEQNVNCTNSVDLENSGIIENHILSYEDFT-KDRKFVALEAEVKRVLQ 427
FN V + R E++ N DL SG++ H S D T + E ++L+
Sbjct: 400 FNTLVAGHYRYGKEEDGNRLLR-DLSVSGLL--HDSSLCDVTVAGLCWAGRYDEAMKLLE 456
Query: 428 TLLGMLQKQVELITTEHGILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHD 487
LL E GI P+ + ++ A+ AG + + K L S
Sbjct: 457 NLL------------EKGI-PPSVVAFNSIIAAYGNAGLEERAFYAYGIMVKFGLTPSSS 503
Query: 488 DAALGHVITLCISL---GWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTA 544
+ +L ISL G LD+A L +M G ++ + LL Y +
Sbjct: 504 TCS-----SLLISLVRKGSLDEAWIALYDMIDKGFPVTNMAFTVLLDGYFRIGAVNMAES 558
Query: 545 LLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEM-KESKIPRSGHQEFEMLVKG 603
L + + G+ DA + A + + A +F +M ++ +P + + L+ G
Sbjct: 559 LWNEMKGRGVFPDAVAFAAFINGLCISGLMTDAYDVFSDMLRKGFVPN--NFVYNSLIGG 616
Query: 604 CAQNHEAGLMAKLLQEV-KEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHL 662
+ + KL++E+ K G D + N +I CK+ M+ A + M +G
Sbjct: 617 FCKVGKLNEALKLVREMNKRGLLPD--IFTVNMIICGLCKQGRMKLAIETFMDMCRMGLS 674
Query: 663 PNAQTFHSMVTGYAA---IGG 680
P+ T+++++ GY +GG
Sbjct: 675 PDIVTYNTLIDGYCKAFDVGG 695
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/203 (22%), Positives = 86/203 (42%), Gaps = 6/203 (2%)
Query: 478 EKENLQVSHDDAALGHVIT-LCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEA 536
E + V D A I LCIS G + A+D+ +M G ++ VY SL+ + +
Sbjct: 562 EMKGRGVFPDAVAFAAFINGLCIS-GLMTDAYDVFSDMLRKGFVPNNFVYNSLIGGFCKV 620
Query: 537 NRPREVTALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQE 596
+ E L+R+ G+ D ++ Q A+ F +M +
Sbjct: 621 GKLNEALKLVREMNKRGLLPDIFTVNMIICGLCKQGRMKLAIETFMDMCRMGLS-PDIVT 679
Query: 597 FEMLVKGCAQNHEAGLMAKLLQEVKE-GQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKR 655
+ L+ G + + G L+ ++ + G D + +N IH +C R + A L+
Sbjct: 680 YNTLIDGYCKAFDVGGADDLMMKMSDSGWEPD--LTTYNIRIHGYCTVRKINRAVMILEE 737
Query: 656 MRSLGHLPNAQTFHSMVTGYAAI 678
+ S+G +PN T+++M+ +
Sbjct: 738 LISVGIVPNTVTYNTMINAVCNV 760
>gi|296081889|emb|CBI20894.3| unnamed protein product [Vitis vinifera]
Length = 608
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 67/309 (21%), Positives = 132/309 (42%), Gaps = 20/309 (6%)
Query: 448 QPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQA 507
+P+ Y L+ A L K + H +I +EN + D VI G + +A
Sbjct: 104 KPSLVTYTTLLAA-LTIQKHFDSIHSIISQVEEN-GMEPDSIFFNAVINAFSESGNMQEA 161
Query: 508 HDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLR-DARSAGIQLDASCYEALLQ 566
+M +G + ++S + +L+K Y A P E LL ++ ++ + Y L++
Sbjct: 162 MKYFWKMKESGSKPTTSTFNTLIKGYGIAGEPEESQKLLELMSQDENVRPNLRTYNVLVR 221
Query: 567 SKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQE-----VK 621
+ +K+ A ++ +M S + + + + AQN EA ++ E V+
Sbjct: 222 AWCNKKNIMKAWNVVYKMVASGL-QPDAVTYNTIATAYAQNGEASQAEGIILEMQNSNVQ 280
Query: 622 EGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGK 681
+R C +I +CK+ +++A + + RM+ LG PN F+S++ G+ +
Sbjct: 281 PNERTCC------IIIGGYCKEGKIKEALQFVYRMKDLGLQPNLVVFNSLIKGFIDAVDR 334
Query: 682 YTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFIDKY 741
V E+ M+ F + D +++ + GF + E+ M + ++ D +
Sbjct: 335 -DGVNEVLTLMEEFG----VKPDVITFSTIMNAWSAAGFMDKCREIFDDMVKARIQPDAH 389
Query: 742 KYRTLFLKY 750
Y L Y
Sbjct: 390 VYSILAKGY 398
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/234 (20%), Positives = 100/234 (42%), Gaps = 12/234 (5%)
Query: 447 LQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQ 506
LQP Y + A+ + G+ + +++ + N+Q + + +I G + +
Sbjct: 244 LQPDAVTYNTIATAYAQNGEASQAEGIILEMQNSNVQPNERTCCI--IIGGYCKEGKIKE 301
Query: 507 AHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQ 566
A + M G++ + V+ SL+K +I+A V +L G++ D + ++
Sbjct: 302 ALQFVYRMKDLGLQPNLVVFNSLIKGFIDAVDRDGVNEVLTLMEEFGVKPDVITFSTIMN 361
Query: 567 SKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRI 626
+ +F +M +++I H + +L KG + E ++L + I
Sbjct: 362 AWSAAGFMDKCREIFDDMVKARIQPDAHV-YSILAKGYVRAGEPEKAEEILNAM-----I 415
Query: 627 DCGVHD----WNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYA 676
G H + +I+ +C M+ A K ++M G PN +TF +++ GY
Sbjct: 416 KSGFHPNVVIFTTIINGWCSAGRMEYAIKIFEKMCECGIAPNLKTFETLIWGYG 469
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/186 (21%), Positives = 84/186 (45%), Gaps = 1/186 (0%)
Query: 494 VITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAG 553
++ + I G + +LD + G + S Y +LL A + +++ G
Sbjct: 78 LMNIMIEKGRPQEVQSILDSIIEGGHKPSLVTYTTLLAALTIQKHFDSIHSIISQVEENG 137
Query: 554 IQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLM 613
++ D+ + A++ + + A+ F +MKES + F L+KG E
Sbjct: 138 MEPDSIFFNAVINAFSESGNMQEAMKYFWKMKESG-SKPTTSTFNTLIKGYGIAGEPEES 196
Query: 614 AKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVT 673
KLL+ + + + + + +N ++ +C K+ + A + +M + G P+A T++++ T
Sbjct: 197 QKLLELMSQDENVRPNLRTYNVLVRAWCNKKNIMKAWNVVYKMVASGLQPDAVTYNTIAT 256
Query: 674 GYAAIG 679
YA G
Sbjct: 257 AYAQNG 262
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/176 (21%), Positives = 77/176 (43%), Gaps = 3/176 (1%)
Query: 447 LQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQ 506
LQP ++ L+K F++A + L E+ V D ++ + G++D+
Sbjct: 314 LQPNLVVFNSLIKGFIDAVDRDGVNEVLTLMEE--FGVKPDVITFSTIMNAWSAAGFMDK 371
Query: 507 AHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQ 566
++ D+M A ++ + VY+ L K Y+ A P + +L +G + + ++
Sbjct: 372 CREIFDDMVKARIQPDAHVYSILAKGYVRAGEPEKAEEILNAMIKSGFHPNVVIFTTIIN 431
Query: 567 SKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKE 622
A+ +F++M E I + FE L+ G + + ++LQ ++E
Sbjct: 432 GWCSAGRMEYAIKIFEKMCECGIA-PNLKTFETLIWGYGEARQPWKSEEVLQIMEE 486
>gi|225464790|ref|XP_002268064.1| PREDICTED: pentatricopeptide repeat-containing protein At2g26790,
mitochondrial [Vitis vinifera]
Length = 817
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 82/178 (46%), Gaps = 2/178 (1%)
Query: 504 LDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEA 563
L +A D+ +M G+ +Y +L+ AY +A + AL D S GI+ + +
Sbjct: 313 LKEAEDVFIDMVNEGIAPDGYIYGALIHAYCKAGNLLQAVALHNDMVSNGIKTNCVIVSS 372
Query: 564 LLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEG 623
+LQ + FKE ++S I + ++V + + +LL E+K G
Sbjct: 373 ILQCLCEMGMASEVVDQFKEFRDSGIFLD-EVLYNIVVDALCKLGKVEEAVELLNEMK-G 430
Query: 624 QRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGK 681
+R+ V + +I +C + + DA+ + M+ G P+ T++ +V G++ G K
Sbjct: 431 RRMSLDVVHYTTLIAGYCLQGKLVDAKNMFEEMKERGIEPDIVTYNILVGGFSRNGLK 488
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/226 (22%), Positives = 95/226 (42%), Gaps = 4/226 (1%)
Query: 454 YIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQAHDLLDE 513
Y +++ F K KE I E ++ D G +I G L QA L ++
Sbjct: 300 YTAVIRGFCSEMKLKEAEDVFIDMVNEG--IAPDGYIYGALIHAYCKAGNLLQAVALHND 357
Query: 514 MHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQKD 573
M G++ + + +S+L+ E EV ++ R +GI LD Y ++ +
Sbjct: 358 MVSNGIKTNCVIVSSILQCLCEMGMASEVVDQFKEFRDSGIFLDEVLYNIVVDALCKLGK 417
Query: 574 TPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRIDCGVHDW 633
A+ L EMK ++ ++ C Q + +E+KE + I+ + +
Sbjct: 418 VEEAVELLNEMKGRRMSLDVVHYTTLIAGYCLQGKLVD-AKNMFEEMKE-RGIEPDIVTY 475
Query: 634 NNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIG 679
N ++ F + L ++A + L + + G PN+ T + ++ G G
Sbjct: 476 NILVGGFSRNGLKKEALELLDCIGTQGLKPNSATHNRIIEGLCMAG 521
Score = 39.3 bits (90), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 58/294 (19%), Positives = 108/294 (36%), Gaps = 9/294 (3%)
Query: 457 LVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQAHDLLDEMHL 516
LVKA++ G E L + ++ V H + ++ I G +D A + +
Sbjct: 163 LVKAYVRVGMFDEAIDALFQTKRRGF-VPHI-MSCNFLMNRLIEHGKIDMAVAIYRHLKR 220
Query: 517 AGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQKDTPG 576
G+ + Y +KA E + R+ AG+ +A ++ K +
Sbjct: 221 LGLNPNDYTYGIFIKALCRKGNFEEAVDVFREMEEAGVNPNAVTCSTYIEGLCSHKRSDL 280
Query: 577 ALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRIDCGVHDWNNV 636
+ ++ + P ++ C++ + V EG D + + +
Sbjct: 281 GYEALRALRAANWPIDTFAYTAVIRGFCSEMKLKEAEDVFIDMVNEGIAPDGYI--YGAL 338
Query: 637 IHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEMKSFA 696
IH +CK + A M S G N S++ +G +E+ + K F
Sbjct: 339 IHAYCKAGNLLQAVALHNDMVSNGIKTNCVIVSSILQCLCEMG----MASEVVDQFKEFR 394
Query: 697 SSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFIDKYKYRTLFLKY 750
S + DE L + V+ + G A E++ M+ +M +D Y TL Y
Sbjct: 395 DS-GIFLDEVLYNIVVDALCKLGKVEEAVELLNEMKGRRMSLDVVHYTTLIAGY 447
>gi|147797511|emb|CAN71434.1| hypothetical protein VITISV_010168 [Vitis vinifera]
Length = 814
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 53/102 (51%), Gaps = 4/102 (3%)
Query: 492 GHVITLCI----SLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLR 547
GHV+++ + G +D+A +L++ M G+R + + L+ ++ +R + L +
Sbjct: 228 GHVLSILVLTFSKCGEVDKAFELIERMEDLGIRLNEKTFCVLIHGFVRQSRVDKALQLFK 287
Query: 548 DARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKI 589
+ +G D S Y+AL+ +K+ ALHL EMKE I
Sbjct: 288 KMQKSGFAPDVSVYDALIGGLCAKKEIEKALHLLSEMKELGI 329
Score = 52.8 bits (125), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 45/204 (22%), Positives = 94/204 (46%), Gaps = 13/204 (6%)
Query: 494 VITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAG 553
VI + G LD A L +M G + + +Y +L+ +NR E LL++ + +G
Sbjct: 423 VIDGLCNTGKLDLALSLFRDMVRVGCKQNVLLYNNLIDKLSNSNRLEECYLLLKEMKGSG 482
Query: 554 IQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQ----EFEMLVKG-CAQNH 608
+ + ++ ++D GAL + +EM+ GH+ + +LVK C +
Sbjct: 483 FRPTQFTHNSIFGCLCRREDVTGALDMVREMR-----VHGHEPWIKHYTLLVKQLCKRKR 537
Query: 609 EAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTF 668
A L + V+EG D + ++ I F K + + A + + + + G+ P+ +
Sbjct: 538 SAEACNFLAEMVREGFLPD--IVAYSAAIDGFVKIKAVDQALEIFRDICARGYCPDVVAY 595
Query: 669 HSMVTGYAAIGGKYTEVTELWGEM 692
++++ G+ + + +E ++ EM
Sbjct: 596 NTLINGFCKV-KRVSEAHDILDEM 618
Score = 40.8 bits (94), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 43/193 (22%), Positives = 72/193 (37%), Gaps = 5/193 (2%)
Query: 507 AHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQ 566
A D++ EM + G Y L+K + R E L + G D Y A +
Sbjct: 506 ALDMVREMRVHGHEPWIKHYTLLVKQLCKRKRSAEACNFLAEMVREGFLPDIVAYSAAID 565
Query: 567 SKIVQKDTPGALHLFKEM-KESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQR 625
+ K AL +F+++ P + L+ G + +L E+
Sbjct: 566 GFVKIKAVDQALEIFRDICARGYCPDV--VAYNTLINGFCKVKRVSEAHDILDEMVAKGL 623
Query: 626 IDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEV 685
+ V +N +I +CK + A L RM PN T+ +++ G G+ +
Sbjct: 624 VP-SVVTYNLLIDGWCKNGDIDQAFHCLSRMVGKEREPNVITYTTLIDGLCN-AGRPDDA 681
Query: 686 TELWGEMKSFASS 698
LW EM+ S
Sbjct: 682 IHLWNEMRGKGCS 694
>gi|413938248|gb|AFW72799.1| hypothetical protein ZEAMMB73_717335 [Zea mays]
Length = 501
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 53/249 (21%), Positives = 102/249 (40%), Gaps = 14/249 (5%)
Query: 442 TEHGILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISL 501
E GI PT+ Y ++K F +G+ + F ++ ++ S+D+ V++ L
Sbjct: 236 VESGI-APTKATYNIILKGFFRSGQLQHAWDFFLQMKRRG---SNDENCKPDVVSYTTVL 291
Query: 502 ------GWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQ 555
G LD+A + DEM + G + S++ Y +L++ + + A+ D G
Sbjct: 292 HGLGVAGQLDKARKVFDEMSIEGCKPSTATYNALIQVTCKKGNLEDAVAVFDDMVRKGYI 351
Query: 556 LDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAK 615
+ Y L++ A+ L MK Q + +L++ + E
Sbjct: 352 PNVVTYTVLIRGLCHAGKVVRAMKLLDRMKSEGC-EPNVQTYNVLIRYSLEEGEIEKGLD 410
Query: 616 LLQEVKEGQRIDCGVHDWNNVIH-FFCKKRL--MQDAEKALKRMRSLGHLPNAQTFHSMV 672
L + + +G+ +N +I F +KR M A + + M G+LP F+ ++
Sbjct: 411 LFETMSKGEECLPNQDTYNIIISAMFVRKRAEDMAVAARMVVEMVDRGYLPRKFMFNRVL 470
Query: 673 TGYAAIGGK 681
G G +
Sbjct: 471 NGLMLTGNQ 479
>gi|222613030|gb|EEE51162.1| hypothetical protein OsJ_31934 [Oryza sativa Japonica Group]
Length = 404
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 56/255 (21%), Positives = 108/255 (42%), Gaps = 18/255 (7%)
Query: 500 SLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIE---ANRPREVTALLRDARSAGIQL 556
++G L +A D+ ++ G+ S + Y SL+ Y + A V LL++ AGI
Sbjct: 138 AIGQLRKAGDVAKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISP 197
Query: 557 DASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKL 616
A + L+ +T A+ +F+EMK+ I S + L+ G + KL
Sbjct: 198 TAVTFGVLINGYCKNSNTAAAVRVFEEMKQQGIAAS-VVTYNSLISGLCSEGKVEEGVKL 256
Query: 617 LQEVKEGQRIDCGVHD----WNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMV 672
++E++ D G+ + V+ FCKK +M DA + M P+ ++ ++
Sbjct: 257 MEEME-----DLGLSPNEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYNILI 311
Query: 673 TGYAAIGGKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMME 732
Y +G + +K + ++ + + ++ F R G + A+ ++ M+
Sbjct: 312 DVYRRLGKMEDAMA-----VKEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMK 366
Query: 733 EGKMFIDKYKYRTLF 747
E + D Y L
Sbjct: 367 EKGIEADVVTYNVLI 381
Score = 41.2 bits (95), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 50/114 (43%), Gaps = 5/114 (4%)
Query: 247 IAMKPNTNTFNIALAGCLLFETTRKAEQLLDIMPRIGVKADSNLLIIMAHIYERNGRREE 306
+ + PN TF L G A +D M V+ D + I+ +Y R G+ E+
Sbjct: 263 LGLSPNEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYNILIDVYRRLGKMED 322
Query: 307 LRKLQRHIDEAVNLSDIQFR-QFYNCLLSCHLKFGDLNSASKMVLEMLQRAKEA 359
+ EA+ I YNCL++ + GD SAS ++ EM ++ EA
Sbjct: 323 ----AMAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEA 372
>gi|449438016|ref|XP_004136786.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g41720-like [Cucumis sativus]
Length = 707
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/251 (21%), Positives = 107/251 (42%), Gaps = 9/251 (3%)
Query: 507 AHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQ 566
A +++++M A + S S + +L+ A RE + + G+ D + +L
Sbjct: 84 ATNIMEDMLRAAIPPSRSTFNNLINACGSCGNWREALRVCKKMTDNGVGPDLVTHNIVLS 143
Query: 567 SKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRI 626
+ AL F+ MK + I R +++ + + G ++ ++E +R
Sbjct: 144 AYKSGAQYSKALSYFELMKGTNI-RPDTTTLNIVIHCLIKVKQYGQAIEIFSSMRE-KRS 201
Query: 627 DC--GVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTE 684
+C V + ++IH + + ++D + M + G PN +++++++ YA+ G E
Sbjct: 202 ECRPDVVTFTSIIHLYSVRGQIEDCKAVFSTMLAEGIKPNIVSYNALISAYAS-HGMDKE 260
Query: 685 VTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFIDKYKYR 744
++ EMK + D S++ TF R ARA EV MM+ K + Y
Sbjct: 261 AFSVFDEMK----RSGFCPDVVSYTSLISTFGRSQQPARAREVFDMMKRNKCKPNLVSYN 316
Query: 745 TLFLKYHKTLY 755
L Y Y
Sbjct: 317 ALMDAYGSNGY 327
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 51/233 (21%), Positives = 107/233 (45%), Gaps = 10/233 (4%)
Query: 500 SLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDAS 559
S G+L QA D+L EM G+ + +LL A + + ++L A GI L+
Sbjct: 324 SNGYLPQAVDILREMEQDGIHPNVVSICTLLAACGRFGQKVNIDSVLSAAELRGIHLNTI 383
Query: 560 CYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQE 619
+ + S + + A++L++ M E+K + F +L+ GC + + +E
Sbjct: 384 ACNSAIGSYMNIGEYEKAINLYRSM-ENKTTKPDSVTFTILISGCCRMSKYEEALCFFKE 442
Query: 620 VKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIG 679
+ + RI ++++I + K+ + AE ++ G P+ T+ +M+ Y+A
Sbjct: 443 MLD-LRIPLSSEIYSSMICAYSKQGQLVKAESLFNSLKGSGCCPDLVTYTAMINAYSA-S 500
Query: 680 GKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMME 732
+ +V L+ EM+ + ++ D +++ F +G +A+ V+ + E
Sbjct: 501 EMWEKVCALYQEME----ANNIQLDSIACSALMKAFNKGN---QASNVLILAE 546
Score = 43.9 bits (102), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 56/261 (21%), Positives = 104/261 (39%), Gaps = 7/261 (2%)
Query: 430 LGMLQKQVELI-TTEHGILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDD 488
+G +K + L + E+ +P + L+ K +E F E +L++
Sbjct: 395 IGEYEKAINLYRSMENKTTKPDSVTFTILISGCCRMSKYEEALCFF--KEMLDLRIPLSS 452
Query: 489 AALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRD 548
+I G L +A L + + +G Y +++ AY + +V AL ++
Sbjct: 453 EIYSSMICAYSKQGQLVKAESLFNSLKGSGCCPDLVTYTAMINAYSASEMWEKVCALYQE 512
Query: 549 ARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNH 608
+ IQLD+ AL+++ L L + MKE IP + FEML C+
Sbjct: 513 MEANNIQLDSIACSALMKAFNKGNQASNVLILAEIMKEKGIPFNDANFFEML-SACSILR 571
Query: 609 EAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTF 668
+ L+ ++ + + N+++ F K + K R +LG N T+
Sbjct: 572 DWRKATDLINLMEPSFHL-VSLGTINHLLQFLGKSGKTEIMIKLFYRFVALGSSVNINTY 630
Query: 669 HSMVTGYAAIGG--KYTEVTE 687
++ + G KY EV +
Sbjct: 631 SILLKNLLSAGKWRKYIEVLQ 651
>gi|410110113|gb|AFV61136.1| pentatricopeptide repeat-containing protein 123, partial [Lippia
filifolia]
Length = 439
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/255 (20%), Positives = 117/255 (45%), Gaps = 25/255 (9%)
Query: 447 LQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQ---VSHDDAALGHVITLCISLGW 503
++P Y L++ + +A E H +++N++ V+++ + + TL
Sbjct: 186 IEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTL-----E 240
Query: 504 LDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEA 563
++A++L+ EM G+ +S Y++++ + + + L + RS+G+++D +
Sbjct: 241 HEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEID----QI 296
Query: 564 LLQSKIVQKDTPG----ALHLFKEMKE-SKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQ 618
L Q+ IV + G A L E+K IPR ++ G + EA + + Q
Sbjct: 297 LFQTMIVAYERAGLVAHAKRLLHELKRPDNIPRDTAIH---ILAGAGRIEEATYVFR--Q 351
Query: 619 EVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAI 678
+ G+ D V + +IH K + + + +MR LG+ P++ ++ Y +
Sbjct: 352 AIDAGEVKDITV--FERMIHLLSKYKKXSNVVEVFDKMRGLGYFPDSDVIAIVLNAYGKL 409
Query: 679 GGKYTEVTELWGEMK 693
++ + +++ EM+
Sbjct: 410 -QEFDKANDVYMEMQ 423
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 64/315 (20%), Positives = 130/315 (41%), Gaps = 40/315 (12%)
Query: 447 LQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQ 506
L P Y L+ F + G +L K E++ QV D ++I L L +
Sbjct: 11 LSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQD--QVPGDLVLYSNLIELSRKLCDYSK 68
Query: 507 AHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQ 566
A + + +G Y +++ + +A RE +L+ + ++AG+ + + Y LL
Sbjct: 69 AISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMKTAGVMPNTTSYSTLLT 128
Query: 567 SKIVQKDTPGALHLFKEMKESK-------------------IPRSGHQEFEMLVK-GCAQ 606
+ K AL +F EM+E K + + + F + K G
Sbjct: 129 MYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEP 188
Query: 607 N-----------HEAGLMAKLLQEVKEGQR--IDCGVHDWNNVIHFFCKKRLMQDAEKAL 653
N +A L + + + QR I+ V +N+++ + K + A +
Sbjct: 189 NVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLI 248
Query: 654 KRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEMKSFASSTSMNFDEELLDSVLY 713
+ M+S G PN+ T+ ++++ + + GK L+ +++ S+ + D+ L +++
Sbjct: 249 QEMQSRGIEPNSITYSTIISIWGKV-GKLDRAAMLFQKLR----SSGVEIDQILFQTMIV 303
Query: 714 TFVRGGFFARANEVV 728
+ R G A A ++
Sbjct: 304 AYERAGLVAHAKRLL 318
>gi|168018631|ref|XP_001761849.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162686904|gb|EDQ73290.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 892
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 62/122 (50%), Gaps = 1/122 (0%)
Query: 473 FLIKAEKENLQVSHDDAALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKA 532
F +KA L V ++ C+ LG ++QA++LL EM G++ ++ Y L+
Sbjct: 457 FEMKAAMGRLGVQPSVVTYSTLVNCCVKLGDMEQAYNLLAEMKQVGIQPNAHCYNPLIMG 516
Query: 533 YIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKI-PR 591
+ R +LR+ SAG+Q D+ Y L+ + + ++ A+ LF+EM + + P
Sbjct: 517 FGSQARLDRALEVLREMLSAGVQPDSYTYSMLIFACSMVRNEDKAVELFEEMLQRGVQPN 576
Query: 592 SG 593
+G
Sbjct: 577 AG 578
Score = 47.4 bits (111), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 39/193 (20%), Positives = 87/193 (45%), Gaps = 5/193 (2%)
Query: 502 GWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCY 561
G ++A ++ M GV+ S Y++L+ ++ + LL + + GIQ +A CY
Sbjct: 451 GMYEEAFEMKAAMGRLGVQPSVVTYSTLVNCCVKLGDMEQAYNLLAEMKQVGIQPNAHCY 510
Query: 562 EALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQE-V 620
L+ Q AL + +EM + + + + ML+ C+ +L +E +
Sbjct: 511 NPLIMGFGSQARLDRALEVLREMLSAGVQPDSYT-YSMLIFACSMVRNEDKAVELFEEML 569
Query: 621 KEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGG 680
+ G + + G++ + C K ++ + + +K + G + + +++ G ++ G
Sbjct: 570 QRGVQPNAGIYSAMASVFARCGK--LERSIEMVKEIERRGEVVGTKAKSAILAGL-SLAG 626
Query: 681 KYTEVTELWGEMK 693
+ E L+G +K
Sbjct: 627 RLGEALALYGALK 639
>gi|358347566|ref|XP_003637827.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355503762|gb|AES84965.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 639
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 58/312 (18%), Positives = 120/312 (38%), Gaps = 41/312 (13%)
Query: 497 LCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQL 556
CI +G L +A LL+EM L V + + L+ + ++ T++L G++
Sbjct: 239 FCI-VGQLKEAVGLLNEMSLNNVNPNVYTFNILIDGLCKEGEVKKATSVLSVMIKQGVEP 297
Query: 557 DASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKL 616
+ Y +L+ + K+ A H+F + + + H + +++ G +N KL
Sbjct: 298 NVVTYTSLMDGYFLVKEVNKAKHVFNTISLRGVTPNVH-SYSVMINGLCKNKMVDEAVKL 356
Query: 617 LQEV--------------------KEGQRIDC--------------GVHDWNNVIHFFCK 642
+E+ K G+ D + +N++++ CK
Sbjct: 357 FKEMHLKNMTPNTVTYSSLIDGLCKSGRISDVWDLIDEINNRGQPANIITYNSLLNGLCK 416
Query: 643 KRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEMKSFASSTSMN 702
+ A L +M+ G P+ T+ ++V G G+ + ++ ++ +N
Sbjct: 417 NHQVDKAIALLTKMKDEGIQPDMSTYTTLVDGLCK-NGRLKDAQRIYQDL--LCKGYPLN 473
Query: 703 FDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFIDKYKYRTLFLKYHKTLYKGKTPKF 762
+ ++ + GFF A +++ ME+ D Y TL K GK K
Sbjct: 474 I--RMYTVMINGLCKEGFFDEALSLLSQMEDNGCMPDAVTYETLISALFKNNKNGKAVKL 531
Query: 763 QTEAQLKKREAA 774
E ++ + +
Sbjct: 532 LREMIARESDCS 543
Score = 40.8 bits (94), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 42/219 (19%), Positives = 88/219 (40%), Gaps = 6/219 (2%)
Query: 513 EMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQK 572
+M L G++ + L+ + + +++ G Q D LL+ +
Sbjct: 78 QMELKGIQPEMFTFNILINCFSHLCQLNFAFSMVAKILKLGYQPDTVTVNTLLRGLCLNG 137
Query: 573 DTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRIDCGVHD 632
AL+ + + + L+ G ++ E +LL++++ + V
Sbjct: 138 KVKEALNFHDHVIRKRF-HLDQVSYGTLINGLCKSGETRAALQLLRKIEGLLLVRPDVIM 196
Query: 633 WNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEM 692
+ +I FCK +L+ DA M PN TF+S++ G+ + G+ E L EM
Sbjct: 197 YTAIIDSFCKDKLVIDAYDLYSEMIVKKIYPNVVTFNSLIYGFCIV-GQLKEAVGLLNEM 255
Query: 693 KSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMM 731
S ++N + + ++ + G +A V+++M
Sbjct: 256 ----SLNNVNPNVYTFNILIDGLCKEGEVKKATSVLSVM 290
>gi|302821471|ref|XP_002992398.1| hypothetical protein SELMODRAFT_135281 [Selaginella moellendorffii]
gi|300139814|gb|EFJ06548.1| hypothetical protein SELMODRAFT_135281 [Selaginella moellendorffii]
Length = 698
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 70/348 (20%), Positives = 142/348 (40%), Gaps = 17/348 (4%)
Query: 407 EDFTKDRKFVALEAEVKRVLQTLLGMLQK--QVELITTEHGILQPT----EKI-YIKLVK 459
E ++ K+ L +K TLLG + Q++ I T +L+ T KI Y L+
Sbjct: 302 EALLEEMKWYGLRPNLK-AYNTLLGGYSRKGQLQQIDTVKTLLRDTGMSINKITYCLLID 360
Query: 460 AFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQAHDLLDEMHLAGV 519
A+ AG L + E + + + +IT+ G + LL EM AGV
Sbjct: 361 AYARAGLMDRLEA--LYQEMRDCDIRPNTYMYARMITIYRDTGQWQKGVKLLREMQQAGV 418
Query: 520 RASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALH 579
+ VY ++ + + + + GI+ D + +L+ + A
Sbjct: 419 TPDAHVYNVIINTFGRTRQLEQARIAFFKMQDGGIEPDVVSWNSLIDACCKAGQPLEARK 478
Query: 580 LFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRIDCGVHDWNNVIHF 639
L+ +M + Q F +++ G ++ + ++++E++ + + V + ++
Sbjct: 479 LYYKMVNDGCAPTA-QTFNIVIHGLGEHKRWNDVNEMVEEMR-SKGMFPNVVTYTTLVDV 536
Query: 640 FCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEMKSFASST 699
+ + RL QDA + L+ M+ G P+ + ++ YA +G + E +
Sbjct: 537 YAQARLFQDAVECLQTMKEDGMGPSPTAYSALANAYAQLG-----MCEQTLHVLQTMEKE 591
Query: 700 SMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFIDKYKYRTLF 747
++ + +L+ ++ F G A V ++E + DK Y TL
Sbjct: 592 NIEINLAMLNLLINAFSMAGRSQEAFAVFEYIKEAGLTADKITYTTLM 639
Score = 53.5 bits (127), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 78/342 (22%), Positives = 136/342 (39%), Gaps = 50/342 (14%)
Query: 447 LQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLG---W 503
+Q K+Y L+ A +A K E FL E LQ S A I+L +SLG
Sbjct: 243 VQVDGKVYNDLIFACGQAHKPNEGMFFL-----EKLQASGLVADRDSYISLMLSLGKHGR 297
Query: 504 LDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCY-- 561
+A LL+EM G+R + Y +LL Y + +++ + R G+ ++ Y
Sbjct: 298 TAEAEALLEEMKWYGLRPNLKAYNTLLGGYSRKGQLQQIDTVKTLLRDTGMSINKITYCL 357
Query: 562 --------------EALLQSK----------------IVQKDT---PGALHLFKEMKESK 588
EAL Q + +DT + L +EM+++
Sbjct: 358 LIDAYARAGLMDRLEALYQEMRDCDIRPNTYMYARMITIYRDTGQWQKGVKLLREMQQAG 417
Query: 589 IPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQD 648
+ H + +++ + + ++++G I+ V WN++I CK +
Sbjct: 418 VTPDAHV-YNVIINTFGRTRQLEQARIAFFKMQDGG-IEPDVVSWNSLIDACCKAGQPLE 475
Query: 649 AEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEMKSFASSTSMNFDEELL 708
A K +M + G P AQTF+ ++ G ++ +V E+ EM+S ++ L+
Sbjct: 476 ARKLYYKMVNDGCAPTAQTFNIVIHGLGE-HKRWNDVNEMVEEMRSKGMFPNVVTYTTLV 534
Query: 709 DSVLYTFVRGGFFARANEVVAMMEEGKMFIDKYKYRTLFLKY 750
D + + F A E + M+E M Y L Y
Sbjct: 535 D----VYAQARLFQDAVECLQTMKEDGMGPSPTAYSALANAY 572
Score = 48.1 bits (113), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 82/361 (22%), Positives = 152/361 (42%), Gaps = 61/361 (16%)
Query: 217 AYLAAELILEIGYLFQDGRVDPRKKCNAPLIAMKPNTNTFNIALAGCLLFETT---RKAE 273
AY A L+ + L+Q+ R C+ ++PNT + + ++ T +K
Sbjct: 361 AYARAGLMDRLEALYQEMR-----DCD-----IRPNTYMYARMIT---IYRDTGQWQKGV 407
Query: 274 QLLDIMPRIGVKADSNLLIIMAHIYERNGRREELR----KLQRHIDEAVNLSDIQFRQFY 329
+LL M + GV D+++ ++ + + R + E+ R K+Q E +S +
Sbjct: 408 KLLREMQQAGVTPDAHVYNVIINTFGRTRQLEQARIAFFKMQDGGIEPDVVS-------W 460
Query: 330 NCLLSCHLKFGDLNSASKMVLEMLQRAKEARNSLAAAMLPFNAV--GVNNRTPSEQNVNC 387
N L+ K G A K+ +M+ + A FN V G+ + N
Sbjct: 461 NSLIDACCKAGQPLEARKLYYKMVN------DGCAPTAQTFNIVIHGLG----EHKRWND 510
Query: 388 TNSV--DLENSGIIENHILSYEDFTKDRKFVALEAEVKRVLQTLLGMLQKQVELITT--E 443
N + ++ + G+ N +++Y V + A+ + + Q VE + T E
Sbjct: 511 VNEMVEEMRSKGMFPN-VVTYT------TLVDVYAQAR--------LFQDAVECLQTMKE 555
Query: 444 HGILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGW 503
G + P+ Y L A+ + G ++ H L EKEN++++ A L +I G
Sbjct: 556 DG-MGPSPTAYSALANAYAQLGMCEQTLHVLQTMEKENIEINL--AMLNLLINAFSMAGR 612
Query: 504 LDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEA 563
+A + + + AG+ A Y +L+KA I A + EV+ + + AG + D +
Sbjct: 613 SQEAFAVFEYIKEAGLTADKITYTTLMKALIRAEKLDEVSGVFDEMIKAGCRPDGKAKDM 672
Query: 564 L 564
L
Sbjct: 673 L 673
Score = 47.0 bits (110), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 68/299 (22%), Positives = 119/299 (39%), Gaps = 35/299 (11%)
Query: 487 DDAALGHVITLCISLGWLD--QAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTA 544
D + HVI C G +D L EM GV+ VY L+ A +A++P E
Sbjct: 210 DVVSYTHVIQAC-RHGVVDIYTGFRLFQEMQAEGVQVDGKVYNDLIFACGQAHKPNEGMF 268
Query: 545 LLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGC 604
L +++G+ D Y +L+ S T A L +EMK + R + + L+ G
Sbjct: 269 FLEKLQASGLVADRDSYISLMLSLGKHGRTAEAEALLEEMKWYGL-RPNLKAYNTLLGGY 327
Query: 605 AQNHEAGLMAKLLQEVKEGQRI--DCGVH----DWNNVIHFFCKKRLMQDAEKALKRMRS 658
++ + LQ++ + + D G+ + +I + + LM E + MR
Sbjct: 328 SRKGQ-------LQQIDTVKTLLRDTGMSINKITYCLLIDAYARAGLMDRLEALYQEMRD 380
Query: 659 LGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRG 718
PN + M+T Y G++ + +L EM+ + D + + ++ TF R
Sbjct: 381 CDIRPNTYMYARMITIYRDT-GQWQKGVKLLREMQ----QAGVTPDAHVYNVIINTFGRT 435
Query: 719 GFFARANEVVAMMEEGKMFIDKYKYRTLFLK-------------YHKTLYKGKTPKFQT 764
+A M++G + D + +L Y+K + G P QT
Sbjct: 436 RQLEQARIAFFKMQDGGIEPDVVSWNSLIDACCKAGQPLEARKLYYKMVNDGCAPTAQT 494
>gi|299473436|emb|CBN77833.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 1139
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 85/194 (43%), Gaps = 12/194 (6%)
Query: 484 VSHDDAALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEA---NRPR 540
++ D A+ +I G DQA + D+M GV S + +L+ A A +R R
Sbjct: 160 ITPDVQAINSLINAFAKAGSPDQALKVFDQMSRYGVTPSVITFNTLIDACGRAGDIDRAR 219
Query: 541 EVTALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEML 600
+V + L AG+ + + AL+ S VQ A +EM+ + + L
Sbjct: 220 QVFSRL---SQAGLSPNDRTFSALIHSHAVQGQVDEAFSWLQEMRARGL-EPNRVTYSAL 275
Query: 601 VKGCAQNHEAGLMAKLLQEVKE--GQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRS 658
+ C + AG +A+ Q + E G I+ V W +I K + ++ + K K MR
Sbjct: 276 INACGR---AGQLARAFQTLDEMFGTGIEPNVVTWTTLIDACGKGKELEWSFKLFKEMRE 332
Query: 659 LGHLPNAQTFHSMV 672
G +PN T +++
Sbjct: 333 RGTVPNGVTCSALM 346
>gi|108862162|gb|ABA95747.2| Cytochrome P450 family protein [Oryza sativa Japonica Group]
Length = 1595
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/235 (22%), Positives = 99/235 (42%), Gaps = 10/235 (4%)
Query: 448 QPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENL---QVSHDDAALGHVITLCISLGWL 504
P + L+ G ++ HFL +A + L Q+S+ G C+ G L
Sbjct: 1115 DPDIITFNTLITGLCHEGHVRKAEHFLREAIRRELNPNQLSYTPLIHG----FCMR-GEL 1169
Query: 505 DQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEAL 564
A DLL EM G + +L+ + A + E + + D + Y L
Sbjct: 1170 MVASDLLVEMMGRGHTPDVVTFGALIHGLVVAGKVSEALIVREKMTERQVFPDVNIYNVL 1229
Query: 565 LQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQ 624
+ ++ P A ++ +EM E + + + L+ G ++ G K+ E E +
Sbjct: 1230 ISGLCKKRMLPAAKNILEEMLEKNV-QPDEFVYATLIDGFIRSENLGDARKIF-EFMEHK 1287
Query: 625 RIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIG 679
+ + N +I +C+ +M +A + MR +G +P+ T+ ++++GYA G
Sbjct: 1288 GVCPDIVSCNAMIKGYCQFGMMSEAILCMSNMRKVGCIPDEFTYTTVISGYAKQG 1342
Score = 40.0 bits (92), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 89/213 (41%), Gaps = 12/213 (5%)
Query: 504 LDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSA-GIQLDASCYE 562
D D L M LAG + + +L+ AY +A + T + R G + +
Sbjct: 888 FDAVDDTLQSMSLAGAAPTRACLGALVAAYADAGMLGKATEMCERVREQYGSLPEVTHCN 947
Query: 563 ALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFE--MLVKG-CAQNH-EAGLMAKLLQ 618
LL+ + Q+ A L+ EM SG + +LV+G C + E GL L
Sbjct: 948 RLLKLLVEQRRWDDARKLYDEMLGKD---SGADNYSTCVLVRGLCLERRVEEGLK---LI 1001
Query: 619 EVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAI 678
E + G V +N +I +C++ M L M + G LP T+ S++ +
Sbjct: 1002 EARWGAGCIPHVVFYNVLIDGYCRRGDMGRGLLLLGEMETNGFLPTLVTYGSLIN-WLGK 1060
Query: 679 GGKYTEVTELWGEMKSFASSTSMNFDEELLDSV 711
G ++ L+ EM+ S ++ ++D++
Sbjct: 1061 KGDLEKIGSLFLEMRKRGFSPNVQIYNSVIDAL 1093
>gi|255581046|ref|XP_002531339.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223529061|gb|EEF31046.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 630
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 54/250 (21%), Positives = 105/250 (42%), Gaps = 14/250 (5%)
Query: 448 QPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQA 507
QP E Y L+ + GK +E L E E + + +I +++A
Sbjct: 311 QPDEFTYNMLIDSLCYRGKLQEALGLL--REMEISGCARNVITYNTLIDGFCKNKKIEEA 368
Query: 508 HDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQS 567
++ D+M + G+ +S Y +L+ ++ R +E L+ G++ D Y ++L
Sbjct: 369 EEIFDQMEIQGLSRNSVTYNTLIDGLCKSRRVQEAAQLMDQMIMEGLKPDKFTYNSMLTY 428
Query: 568 KIVQKDTPGALHLFKEMK----ESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVK-E 622
+ D A + + M E I G L+ G + + ++LL+ ++ +
Sbjct: 429 FCREGDIQKAADIVQTMTSNGCEPDIVTYG-----TLIGGLCKAGRVEVASRLLRSIQLK 483
Query: 623 GQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKY 682
G + H +N VI K++ ++A + + M G+ P+A T+ + G + GG
Sbjct: 484 GMVLT--PHAYNPVIQALFKRKRTKEAMRLFREMEEKGNTPDAFTYKIVFRGLSNSGGPI 541
Query: 683 TEVTELWGEM 692
E + EM
Sbjct: 542 GEAVDFVIEM 551
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/251 (21%), Positives = 103/251 (41%), Gaps = 24/251 (9%)
Query: 447 LQPTEKIYIKLVKAFLEAG--------KTKELTHFLIKAEKENLQVSHDDAALGHVITLC 498
L P EK + L++ F+E G K + L + H G +
Sbjct: 224 LVPDEKTFTTLMQGFIEEGNMDGAFRVKEQMLDAGCPVTNVTVNVLVHGFCKEGRIEE-- 281
Query: 499 ISLGWLDQ---------AHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDA 549
+L ++D+ A +L +EM G + Y L+ + + +E LLR+
Sbjct: 282 -ALSFIDEMSNEGKHTMAIELYNEMKNKGCQPDEFTYNMLIDSLCYRGKLQEALGLLREM 340
Query: 550 RSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHE 609
+G + Y L+ K A +F +M+ + R+ + L+ G ++
Sbjct: 341 EISGCARNVITYNTLIDGFCKNKKIEEAEEIFDQMEIQGLSRNSVT-YNTLIDGLCKSRR 399
Query: 610 AGLMAKLL-QEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTF 668
A+L+ Q + EG + D +N+++ +FC++ +Q A ++ M S G P+ T+
Sbjct: 400 VQEAAQLMDQMIMEGLKPD--KFTYNSMLTYFCREGDIQKAADIVQTMTSNGCEPDIVTY 457
Query: 669 HSMVTGYAAIG 679
+++ G G
Sbjct: 458 GTLIGGLCKAG 468
Score = 46.2 bits (108), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 57/278 (20%), Positives = 108/278 (38%), Gaps = 54/278 (19%)
Query: 518 GVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQKDTPGA 577
G++ S + L+KA +A++ R ++ + S G+ D + L+Q I + + GA
Sbjct: 188 GIKPDVSTFNILIKALCKAHQIRPAILVMEEMSSYGLVPDEKTFTTLMQGFIEEGNMDGA 247
Query: 578 LHLFKEMKESKIP--------------RSGHQE----------------------FEMLV 601
+ ++M ++ P + G E EM
Sbjct: 248 FRVKEQMLDAGCPVTNVTVNVLVHGFCKEGRIEEALSFIDEMSNEGKHTMAIELYNEMKN 307
Query: 602 KGCAQNHEA-----------GLMAKLLQEVKEGQRIDCG--VHDWNNVIHFFCKKRLMQD 648
KGC + G + + L ++E + C V +N +I FCK + +++
Sbjct: 308 KGCQPDEFTYNMLIDSLCYRGKLQEALGLLREMEISGCARNVITYNTLIDGFCKNKKIEE 367
Query: 649 AEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEMKSFASSTSMNFDEELL 708
AE+ +M G N+ T+++++ G + E +L +M + D+
Sbjct: 368 AEEIFDQMEIQGLSRNSVTYNTLIDGLCK-SRRVQEAAQLMDQM----IMEGLKPDKFTY 422
Query: 709 DSVLYTFVRGGFFARANEVVAMMEEGKMFIDKYKYRTL 746
+S+L F R G +A ++V M D Y TL
Sbjct: 423 NSMLTYFCREGDIQKAADIVQTMTSNGCEPDIVTYGTL 460
>gi|255581786|ref|XP_002531694.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223528670|gb|EEF30685.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 821
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/229 (19%), Positives = 91/229 (39%), Gaps = 8/229 (3%)
Query: 448 QPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQA 507
+P E+ Y +L+ F + GK T F + K +S + +I G +D A
Sbjct: 474 EPDERTYCELISGFCKGGKLDSATSFFYEMLK--CGISPNQWTYTAMIDGYCKEGKIDVA 531
Query: 508 HDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQS 567
L + M G AS Y +++ + NR E G+Q + Y +L+
Sbjct: 532 LSLFERMEENGCSASIETYNAIISGLSKGNRFSEAEKFCAKMTEQGLQPNTITYTSLING 591
Query: 568 KIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRID 627
T A +F EM++ + H + L+ G Q + +L + E
Sbjct: 592 LCKNTATNLAFKIFHEMEKKNCLPNAHT-YTSLIYGLCQEGKVDAAERLTENGCEPT--- 647
Query: 628 CGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYA 676
+ ++ ++ C++ +A + ++ M+ G P+ + + S++ +
Sbjct: 648 --IDTYSTLVSGLCREGRSNEASQLVENMKEKGLSPSMEIYCSLLVAHC 694
Score = 48.5 bits (114), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 37/178 (20%), Positives = 70/178 (39%), Gaps = 2/178 (1%)
Query: 502 GWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCY 561
G+L+ A L M + Y L+ + + + T+ + GI + Y
Sbjct: 456 GYLNNATRFLYMMKESNCEPDERTYCELISGFCKGGKLDSATSFFYEMLKCGISPNQWTY 515
Query: 562 EALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVK 621
A++ + AL LF+ M+E+ S + + ++ G ++ + K ++
Sbjct: 516 TAMIDGYCKEGKIDVALSLFERMEENGCSAS-IETYNAIISGLSKGNRFSEAEKFCAKMT 574
Query: 622 EGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIG 679
E Q + + ++I+ CK A K M LPNA T+ S++ G G
Sbjct: 575 E-QGLQPNTITYTSLINGLCKNTATNLAFKIFHEMEKKNCLPNAHTYTSLIYGLCQEG 631
Score = 47.4 bits (111), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 51/253 (20%), Positives = 100/253 (39%), Gaps = 15/253 (5%)
Query: 504 LDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEA 563
LD+A ++ D M G +S Y++L+ R E +L + GI+ Y
Sbjct: 248 LDKAFEVFDRMVKDGCNPNSVTYSTLINGLCNEGRIGEAMDMLEEMTEKGIEPTVYTYTV 307
Query: 564 LLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEA----GLMAKLLQE 619
+ S A++L + M + S Q + ++ G + + G+ K+L+E
Sbjct: 308 PISSLCDIGRVDDAINLVRSMGKKGCSPS-VQTYTAIISGLFRAGKMELAIGMYHKMLKE 366
Query: 620 VKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIG 679
+ +N +I+ C + A K M G L NAQT++ ++ G +
Sbjct: 367 GLVPNTV-----TYNALINELCTEGRFGIALKIFDWMEGHGTLANAQTYNQIIKGLFGMD 421
Query: 680 GKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFID 739
+ +K S T + ++ ++++ ++ G+ A + MM+E D
Sbjct: 422 DIEKAMVVFNKMLKDGPSPTVVTYNTLIVEN-----LKRGYLNNATRFLYMMKESNCEPD 476
Query: 740 KYKYRTLFLKYHK 752
+ Y L + K
Sbjct: 477 ERTYCELISGFCK 489
>gi|9755886|emb|CAC01940.1| 67kD chloroplastic RNA-binding protein, P67.1 [Raphanus sativus]
Length = 700
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/242 (21%), Positives = 105/242 (43%), Gaps = 7/242 (2%)
Query: 447 LQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQ 506
L+P ++ A+ AG + +A E ++ D +I + G D
Sbjct: 239 LEPDNVTLAAMIDAYGRAGNVEMALSLYDRARTEKWRI--DPVTFSTLIRIYGYAGNYDG 296
Query: 507 AHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQ 566
++ +EM GV+ + +Y LL + +A RP + T + +D S G + + S Y AL++
Sbjct: 297 CLNIYEEMKSLGVKPNLVIYNRLLDSMGKAKRPWQATMIHKDLISNGFEPNWSTYAALIR 356
Query: 567 SKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRI 626
+ + AL ++++MK + + + L+ CA ++ Q++K
Sbjct: 357 AYGRARYGEDALVIYRQMKGKGLELTVIL-YNTLLSMCADIGYVDEAFEIFQDMKSSGTC 415
Query: 627 DCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVT 686
+ ++++I + + +AE AL+ MR G P S++ Y GK +V
Sbjct: 416 EPDSWTFSSLITVYSCCGRVSEAEAALREMREAGFEPTLFVLTSLIQCY----GKAKQVD 471
Query: 687 EL 688
++
Sbjct: 472 DV 473
Score = 41.2 bits (95), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 33/146 (22%), Positives = 65/146 (44%), Gaps = 7/146 (4%)
Query: 447 LQPTEKIYIKLVKAFLEA--GKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWL 504
+P Y L++A+ A G+ + + +K + L V ++++C +G++
Sbjct: 344 FEPNWSTYAALIRAYGRARYGEDALVIYRQMKGKGLELTV----ILYNTLLSMCADIGYV 399
Query: 505 DQAHDLLDEMHLAGV-RASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEA 563
D+A ++ +M +G S ++SL+ Y R E A LR+ R AG + +
Sbjct: 400 DEAFEIFQDMKSSGTCEPDSWTFSSLITVYSCCGRVSEAEAALREMREAGFEPTLFVLTS 459
Query: 564 LLQSKIVQKDTPGALHLFKEMKESKI 589
L+Q K + F+++ E I
Sbjct: 460 LIQCYGKAKQVDDVVRTFEQVLELGI 485
>gi|242073384|ref|XP_002446628.1| hypothetical protein SORBIDRAFT_06g019140 [Sorghum bicolor]
gi|241937811|gb|EES10956.1| hypothetical protein SORBIDRAFT_06g019140 [Sorghum bicolor]
Length = 614
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 58/278 (20%), Positives = 110/278 (39%), Gaps = 9/278 (3%)
Query: 499 ISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDA 558
I G L A ++ DEM GV + + +L+ +A+ AL AG+ D
Sbjct: 255 IRSGKLASARNMFDEMLRRGVPPTVVTFNTLMSGMCKASDLNSANALRGLMAKAGVAPDV 314
Query: 559 SCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKG-CAQNHEAGLMAKLL 617
Y A +Q A+ +F+EM+E + F L+ C + + A +
Sbjct: 315 YTYGAFMQGLCKAGRIQDAVEMFEEMRERGV-NPNTVVFTTLIDAHCKEGNVAAGLELHR 373
Query: 618 QEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAA 677
+ G + D + +N + + C+ R ++ A ++ MR+ G P+ T+ +++ G+
Sbjct: 374 EMATRGIKTD--LVAYNALANGLCRVRDLKAANDIVEEMRNNGLKPDKVTYTTLIDGFCK 431
Query: 678 IGGKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMF 737
G ++ EMK S + DE +++ + G + ++ M E +
Sbjct: 432 EG-----ELDMAMEMKQEMSDEGVALDEVTYTTLISGLSKSGRSVDSERILCEMMEAGLE 486
Query: 738 IDKYKYRTLFLKYHKTLYKGKTPKFQTEAQLKKREAAL 775
D Y + + K K E Q K R+ +
Sbjct: 487 PDNTTYTMVIDAFCKNSDVKTGFKLLKEMQNKGRKPGV 524
>gi|297819626|ref|XP_002877696.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297323534|gb|EFH53955.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 1188
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 79/332 (23%), Positives = 141/332 (42%), Gaps = 43/332 (12%)
Query: 432 MLQKQVELIT--TEHGILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDA 489
M++K VE++ ++G +P E ++ L+ A + G K+ + E ++ +
Sbjct: 185 MVKKAVEVLDEMPKYG-FEPDEYVFGCLLDALCKNGSVKDASKVF---EDMREKIPPNLR 240
Query: 490 ALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDA 549
++ G L +A ++L +M AG+ V+ +LL Y A + + LL D
Sbjct: 241 YFTSLLYGWCREGKLMEAKEVLVQMKEAGLEPDIVVFTNLLSGYAHAGKMADAYDLLNDM 300
Query: 550 RSAGIQLDASCYEALLQSKI-VQKDTPGALHLFKEMK----ESKIPR-----SGHQEFEM 599
R G + +A+CY L+Q+ +K A+ +F EM+ E+ I SG ++ M
Sbjct: 301 RKRGYEPNANCYTVLIQALCRTEKRMDEAMRVFVEMERYGCEADIVTYTALISGFCKWGM 360
Query: 600 LVKGCA---QNHEAGLMAK-------LLQEVKEGQRIDC----------GVHD----WNN 635
+ KG + + G+M L+ K+ Q +C G H +N
Sbjct: 361 IDKGYSVLDDMRKKGVMPSQVTYMQILVAHEKKEQFEECLELIEKMKQIGCHPDLLIYNV 420
Query: 636 VIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEMKSF 695
VI C R +++A + M + G P A F M+ G+ + G E + EM S
Sbjct: 421 VIRLACNFREVKEAVRLWNEMEANGLSPGADMFVIMINGFTS-QGYLIEACSHFKEMVSR 479
Query: 696 ASSTSMNFDEELLDSVLYTFVRGGFFARANEV 727
++ + L S+L T +R A +V
Sbjct: 480 GIFSAPQYG--TLKSLLNTLLRDDKLEMAKDV 509
>gi|15221549|ref|NP_176454.1| RNA processing factor 2 [Arabidopsis thaliana]
gi|193806496|sp|Q9SXD1.2|PPR91_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g62670, mitochondrial; Flags: Precursor
gi|332195871|gb|AEE33992.1| RNA processing factor 2 [Arabidopsis thaliana]
Length = 630
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 67/299 (22%), Positives = 116/299 (38%), Gaps = 9/299 (3%)
Query: 448 QPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQA 507
QP Y +V + G T + L K E+ L+ +I +D A
Sbjct: 218 QPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGV--LIYNTIIDGLCKYKHMDDA 275
Query: 508 HDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQS 567
+L EM G+R + Y+SL+ R + + LL D I D + AL+ +
Sbjct: 276 LNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDA 335
Query: 568 KIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRID 627
+ + A L+ EM + I S + L+ G H+ AK + E +
Sbjct: 336 FVKEGKLVEAEKLYDEMVKRSIDPS-IVTYSSLINGFCM-HDRLDEAKQMFEFMVSKHCF 393
Query: 628 CGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTE 687
V +N +I FCK + +++ + + M G + N T++ ++ G G E
Sbjct: 394 PDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQ-AGDCDMAQE 452
Query: 688 LWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFIDKYKYRTL 746
++ EM S ++ LLD + + G +A V ++ KM Y Y +
Sbjct: 453 IFKEMVSDGVPPNIMTYNTLLDGL----CKNGKLEKAMVVFEYLQRSKMEPTIYTYNIM 507
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 66/296 (22%), Positives = 120/296 (40%), Gaps = 52/296 (17%)
Query: 447 LQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEK---ENLQVSHDDAALGH---VITLCIS 500
+ P + L+ AF++ GK L++AEK E ++ S D + + + + C+
Sbjct: 322 INPDVFTFSALIDAFVKEGK-------LVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMH 374
Query: 501 LGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASC 560
LD+A + + M Y +L+K + + R E + R+ G+ +
Sbjct: 375 -DRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVT 433
Query: 561 YEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQN---HEAGLMAKLL 617
Y L+Q D A +FKEM +P + L+ G +N +A ++ + L
Sbjct: 434 YNILIQGLFQAGDCDMAQEIFKEMVSDGVP-PNIMTYNTLLDGLCKNGKLEKAMVVFEYL 492
Query: 618 Q----------------------EVKEGQRIDCG---------VHDWNNVIHFFCKKRLM 646
Q +V++G + C V +N +I FC+K
Sbjct: 493 QRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSK 552
Query: 647 QDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEMKS--FASSTS 700
++A+ K M+ G LPN+ +++++ G + EL EM+S FA S
Sbjct: 553 EEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREAS-AELIKEMRSCGFAGDAS 607
>gi|410110067|gb|AFV61113.1| pentatricopeptide repeat-containing protein 123, partial [Aloysia
herrerae]
Length = 433
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/240 (21%), Positives = 109/240 (45%), Gaps = 24/240 (10%)
Query: 447 LQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQ---VSHDDAALGHVITLCISLGW 503
++P Y L++ + +A E H +++N++ V+++ + + TL
Sbjct: 183 IEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTL-----E 237
Query: 504 LDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEA 563
++A++L+ EM G+ +S Y++++ + + + L + RS+G+++D +
Sbjct: 238 HEKANNLIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEID----QV 293
Query: 564 LLQSKIVQKDTPG----ALHLFKEMKE-SKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQ 618
L Q+ IV + G A L E+K IPR ++ G + EA + + Q
Sbjct: 294 LYQTMIVAYERAGLVAHAKRLLHELKSPDNIPRDTAIH---ILAGAGRIEEATYVFR--Q 348
Query: 619 EVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAI 678
+ G+ D V + +IH F K + + + +MR LG+ P++ ++ Y +
Sbjct: 349 AIDAGEVKDITV--FERMIHLFSKYKKYANVVEVFDKMRGLGYFPDSNVIALVLNAYGKL 406
Score = 49.7 bits (117), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 63/315 (20%), Positives = 130/315 (41%), Gaps = 40/315 (12%)
Query: 447 LQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQ 506
L P Y L+ F + G +L K E++ +V D ++I L L +
Sbjct: 8 LSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQD--RVPGDLVLYSNLIELSRKLCDYSK 65
Query: 507 AHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQ 566
A + + +G Y +++ + +A RE AL+ + ++AG+ + + Y LL
Sbjct: 66 AISIFSRLKRSGFMPDLVAYNAMINVFGKAKLFREARALISEMKTAGVMPNTASYSTLLT 125
Query: 567 SKIVQKDTPGALHLFKEMKESK-------------------IPRSGHQEFEMLVK-GCAQ 606
+ K AL +F EM+E K + + + F + K G
Sbjct: 126 MYVENKKFIEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEP 185
Query: 607 N-----------HEAGLMAKLLQEVKEGQR--IDCGVHDWNNVIHFFCKKRLMQDAEKAL 653
N +A L + + + QR I+ V +N+++ + K + A +
Sbjct: 186 NVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLI 245
Query: 654 KRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEMKSFASSTSMNFDEELLDSVLY 713
+ M++ G PN+ T+ ++++ + + GK L+ +++ S+ + D+ L +++
Sbjct: 246 QEMQNRGIEPNSITYSTIISIWGKV-GKLDRAAMLFQKLR----SSGVEIDQVLYQTMIV 300
Query: 714 TFVRGGFFARANEVV 728
+ R G A A ++
Sbjct: 301 AYERAGLVAHAKRLL 315
>gi|291622145|emb|CBJ23782.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
thaliana]
Length = 630
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/218 (21%), Positives = 91/218 (41%), Gaps = 9/218 (4%)
Query: 478 EKENLQVSHDDAALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEAN 537
+ +NL + H+ ++ L A +L +M G +SLL Y
Sbjct: 106 QMQNLGIPHNHYTYSILLNCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGK 165
Query: 538 RPREVTALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQE- 596
R E AL+ G + D + L+ + A+ L M + R +
Sbjct: 166 RISEAVALVDQMVEMGYKPDTVTFNTLIHGLFLHNKASEAVALIDRM----VARGCQPDL 221
Query: 597 --FEMLVKGCAQNHEAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALK 654
+ +V G + + L LL+++++G +I+ V +N +I CK + M DA
Sbjct: 222 FTYGTVVNGLCKRGDIDLALSLLKKMEKG-KIEANVVIYNTIIDGLCKYKHMDDAFDLFN 280
Query: 655 RMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEM 692
+M + G P+ T++S+++ G++++ + L +M
Sbjct: 281 KMETKGIKPDVFTYNSLISCLCNY-GRWSDASRLLSDM 317
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 61/255 (23%), Positives = 106/255 (41%), Gaps = 21/255 (8%)
Query: 447 LQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEK---ENLQVSHDDAALGH---VITLCIS 500
+ P + L+ AF + GK LI+AEK E +Q S D + + + C+
Sbjct: 322 INPNVVTFNSLIDAFAKEGK-------LIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMH 374
Query: 501 LGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASC 560
LD+A + M Y +L+K + +A R E L R+ G+ +
Sbjct: 375 -DRLDEAQQIFTLMVSKDCLPDVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVT 433
Query: 561 YEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQ-- 618
Y L+Q D A +FK+M +P + +L+ G + G + K L
Sbjct: 434 YNTLIQGLFQAGDCDMAQKIFKKMVSDGVP-PDIITYSILLDGLCK---YGKLEKALVVF 489
Query: 619 EVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAI 678
E + +++ ++ +N +I CK ++D + G PN + +M++G+
Sbjct: 490 EYLQKSKMEPNIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRK 549
Query: 679 GGKYTEVTELWGEMK 693
G K E L+ EMK
Sbjct: 550 GLK-EEADALFREMK 563
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 76/363 (20%), Positives = 146/363 (40%), Gaps = 42/363 (11%)
Query: 249 MKPNTNTFNIALAGCLLFETTRKAEQLLDIMPRIGVKADS---NLLIIMAHIYERNGRRE 305
++ N +N + G ++ A L + M G+K D N LI Y R +
Sbjct: 252 IEANVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNSLISCLCNYGR--WSD 309
Query: 306 ELRKLQRHIDEAVNLSDIQFRQFYNCLLSCHLKFGDLNSASKMVLEMLQRAKEARNSLAA 365
R L I+ +N + + F N L+ K G L A K+ EM+QR+ +
Sbjct: 310 ASRLLSDMIERKINPNVVTF----NSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYN 365
Query: 366 AMLPFNAVGVNNRTPSEQNV-------NCTNSVDLENSGI--------IENHILSYEDFT 410
+++ N +++R Q + +C V N+ I +E + + + +
Sbjct: 366 SLI--NGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLIKGFCKAKRVEEGMELFREMS 423
Query: 411 KDRKFVALEAEVKRVLQTLL-----GMLQKQVELITTEHGILQPTEKIYIKLVKAFLEAG 465
+ R V ++Q L M QK + + ++ + P Y L+ + G
Sbjct: 424 Q-RGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDG--VPPDIITYSILLDGLCKYG 480
Query: 466 KTKE---LTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQAHDLLDEMHLAGVRAS 522
K ++ + +L K++ E +++ G + GW DL + L GV+ +
Sbjct: 481 KLEKALVVFEYLQKSKMEPNIYTYNIMIEGMCKAGKVEDGW-----DLFCSLSLKGVKPN 535
Query: 523 SSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFK 582
+Y +++ + E AL R+ + G D+ CY L+++++ D + L K
Sbjct: 536 VIIYTTMISGFCRKGLKEEADALFREMKEDGTLPDSGCYNTLIRARLRDGDKAASAELIK 595
Query: 583 EMK 585
EM+
Sbjct: 596 EMR 598
Score = 42.0 bits (97), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 59/264 (22%), Positives = 109/264 (41%), Gaps = 48/264 (18%)
Query: 504 LDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEA 563
+ +A L+D+M G + + + +L+ N+ E AL+ + G Q D Y
Sbjct: 167 ISEAVALVDQMVEMGYKPDTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGT 226
Query: 564 LLQSKIVQKDTPGALHLFKEMKESKIP--------------RSGHQE--FEMLVK----- 602
++ + D AL L K+M++ KI + H + F++ K
Sbjct: 227 VVNGLCKRGDIDLALSLLKKMEKGKIEANVVIYNTIIDGLCKYKHMDDAFDLFNKMETKG 286
Query: 603 ------------GCAQNH-EAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDA 649
C N+ ++LL ++ E ++I+ V +N++I F K+ + +A
Sbjct: 287 IKPDVFTYNSLISCLCNYGRWSDASRLLSDMIE-RKINPNVVTFNSLIDAFAKEGKLIEA 345
Query: 650 EKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEMKSFASSTSMNFDEELLD 709
EK M PN T++S++ G+ + + E +++ M S + L D
Sbjct: 346 EKLFDEMIQRSIDPNIVTYNSLINGF-CMHDRLDEAQQIFTLMVS---------KDCLPD 395
Query: 710 SVLY-TFVRGGFFARANEVVAMME 732
V Y T ++G F +A V ME
Sbjct: 396 VVTYNTLIKG--FCKAKRVEEGME 417
>gi|55709857|gb|AAV58825.1| hypothetical protein [Arabidopsis thaliana]
Length = 946
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 95/460 (20%), Positives = 167/460 (36%), Gaps = 78/460 (16%)
Query: 251 PNTNTFNIALAGCLLFETTRKAEQLLDIMPRIGVKADSNLLIIMAHIYERNGRREELRKL 310
PN T++ L GCL + + +++L++M G + + H Y +G KL
Sbjct: 294 PNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKL 353
Query: 311 QRHIDEAVNLSDIQFRQFYNCLLSCHLKFGDLNSASKMVLEMLQRAKEARNSLAAAMLPF 370
+ + V + YN L+ GD +S + ++L A++A + + AA +
Sbjct: 354 LKKM---VKCGHMPGYVVYNILIGSIC--GDKDSLN---FDLLDLAEKAYSEMLAAGVVL 405
Query: 371 NAVGVNNRTPSEQNVNCTNSVDLENSGIIENHILSYEDFTKDRKFVALEAEVKRVLQTLL 430
N + V++ T L ++G E V++ ++
Sbjct: 406 NKINVSSFTRC-----------LCSAGKYEKAF--------------------SVIREMI 434
Query: 431 GMLQKQVELITTEHGILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAA 490
G G + P Y K++ A K EL L + K V+
Sbjct: 435 G------------QGFI-PDTSTYSKVLNYLCNASKM-ELAFLLFEEMKRGGLVADVYTY 480
Query: 491 LGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDAR 550
V + C + G ++QA +EM G + Y +L+ AY++A + L
Sbjct: 481 TIMVDSFCKA-GLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETML 539
Query: 551 SAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESK-IPRSGHQEFEMLVKGCAQNHE 609
S G + Y AL+ A +F+ M SK +P + +M K N E
Sbjct: 540 SEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVP-----DVDMYFKQYDDNSE 594
Query: 610 AGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFH 669
V + ++ FCK +++A K L M G PN +
Sbjct: 595 RP-----------------NVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYD 637
Query: 670 SMVTGYAAIGGKYTEVTELWGEMKSFASSTSMNFDEELLD 709
+++ G + GK E E+ EM ++ L+D
Sbjct: 638 ALIDGLCKV-GKLDEAQEVKTEMSEHGFPATLYTYSSLID 676
>gi|357144033|ref|XP_003573143.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g38730-like [Brachypodium distachyon]
Length = 599
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 61/286 (21%), Positives = 107/286 (37%), Gaps = 47/286 (16%)
Query: 506 QAHD---LLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYE 562
+ HD + D+M G+ + +LL A A + + AG+ ++ Y
Sbjct: 126 RPHDAARVFDQMRARGLAPDAHACTALLTALARARMTATAHKVFNEMGRAGVAMNTHVYN 185
Query: 563 ALLQSKIVQKDTPGALHLFKEMKESKIP--RSGHQEFEMLVKGCAQNHEAGLMAKLLQEV 620
A+L + +D A L M + +P R L +EA + + +Q+
Sbjct: 186 AMLHVCLKARDALRAEGLMTRMDAAGVPLDRFSFNTVIALYVRKGMQYEAMCVRERMQD- 244
Query: 621 KEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIG- 679
EG D + WN VIH CK+ M++A + M + P+ T+ ++V GY IG
Sbjct: 245 -EGVEPD--IVTWNTVIHGLCKEGRMKEAAQLRTDMIAAAVEPDTVTYTTLVDGYCRIGD 301
Query: 680 ---------------------------------GKYTEVTELWGEMKSFASSTSMNFDEE 706
GK EV L EM + D
Sbjct: 302 VGEAVKLREEMEAGGMVPGVATYNAIIRKLCEDGKMKEVNGLLSEM----DGRKVQADHV 357
Query: 707 LLDSVLYTFVRGGFFARANEVVAMMEEGKMFIDKYKYRTLFLKYHK 752
++++ ++ + G A +V M E + +D++ Y+ L + K
Sbjct: 358 TCNTLINSYAKRGDMTSACKVKKRMMESGLQLDQFTYKALIHGFCK 403
Score = 43.5 bits (101), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 60/303 (19%), Positives = 112/303 (36%), Gaps = 50/303 (16%)
Query: 447 LQPTEKIYIKLVKAFLEAGKTKELTHF---LIKAEKENLQVSHDDAALGHVITLCISLGW 503
++P + ++ + G+ KE +I A E V++ G+ +G
Sbjct: 247 VEPDIVTWNTVIHGLCKEGRMKEAAQLRTDMIAAAVEPDTVTYTTLVDGYC-----RIGD 301
Query: 504 LDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEA 563
+ +A L +EM G+ + Y ++++ E + +EV LL + +Q D
Sbjct: 302 VGEAVKLREEMEAGGMVPGVATYNAIIRKLCEDGKMKEVNGLLSEMDGRKVQADHVTCNT 361
Query: 564 LLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEG 623
L+ S + D A + K M ES G
Sbjct: 362 LINSYAKRGDMTSACKVKKRMMES-----------------------------------G 386
Query: 624 QRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYT 683
++D + +IH FCK + + +A++AL M G PN F +V G+
Sbjct: 387 LQLD--QFTYKALIHGFCKAKELDEAKEALFEMMGRGFSPNYSVFSWLVDGFCK-KNNTD 443
Query: 684 EVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFIDKYKY 743
V + E+ + D+ + S++ + G A +V+ M+ + +D Y
Sbjct: 444 AVLLIPDEL----IKRGLPPDKSVYRSLIRRLCKKGLVDLAQKVLHQMQGKGLEVDCLVY 499
Query: 744 RTL 746
TL
Sbjct: 500 ATL 502
>gi|242069957|ref|XP_002450255.1| hypothetical protein SORBIDRAFT_05g002620 [Sorghum bicolor]
gi|241936098|gb|EES09243.1| hypothetical protein SORBIDRAFT_05g002620 [Sorghum bicolor]
Length = 924
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 94/474 (19%), Positives = 182/474 (38%), Gaps = 47/474 (9%)
Query: 248 AMKPNTNTFNIALAGCLLFETTRKAEQLLDIMPRIGVKADSNLLIIMAHIYERNGRREEL 307
+KP+ T+ I + G ++ +AE + M GVK ++ + H Y G+ EE+
Sbjct: 360 GVKPDNLTYTIIIDGLCKAQSVDRAEGVFQQMIDKGVKPNNGTYNCLIHGYLSTGQWEEV 419
Query: 308 RKLQRHIDEAVNLSDIQFRQF-YNCLLSCHLKFGDLNSASKMVLEMLQRAKEARNSLAAA 366
+QR I E ++ D++ F Y LL K G N A + M+++ + ++
Sbjct: 420 --VQR-IKE-MSAHDLEPDVFTYGLLLDYLCKNGKCNEARSLFDSMIRKGIKPSVTIYGI 475
Query: 367 ML-PFNAVGVNNRTPSEQNVNCTNSVDLENSGIIENHILSYEDFTKDRKFVALEAEVKRV 425
ML + G + N+ N + N I I +Y A A + V
Sbjct: 476 MLHGYGKKGALSEMHDLLNLMVANGIS-PNHRIFNTVICAY----------AKRAMIDEV 524
Query: 426 LQTLLGMLQKQVELITTEHGIL-------------------------QPTEKIYIKLVKA 460
+ + M Q+ + +G L P ++ LV
Sbjct: 525 MHIFIKMKQQGLSPNVVTYGTLIDALCKLGRVDDAVLQFNQMINEGVTPNNVVFNSLVYG 584
Query: 461 FLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQAHDLLDEMHLAGVR 520
K +++ + E N + D V+ G + +A L+D M G++
Sbjct: 585 LCTVDKWEKVEELFL--EMLNQGIRPDIVFFNTVLCNLCKEGRVMEARRLIDSMVCMGLK 642
Query: 521 ASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHL 580
Y +L+ + A+R E LL SAG++ + Y LL A L
Sbjct: 643 PDVISYNTLIDGHCFASRMDEAVKLLDGMVSAGLKPNIVSYNTLLHGYCKAGRIDNAYCL 702
Query: 581 FKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFF 640
F+EM + G + + ++ G ++ +L + + +++ + ++ ++ F
Sbjct: 703 FREMLRKGVT-PGVETYNTILNGLFRSGRFSEARELYVNMIKSRKL-WSICTYSIILDGF 760
Query: 641 CKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEMKS 694
CK +A K + + S+ + TF+ M+ G GG+ + +L+ + +
Sbjct: 761 CKNNCFDEAFKIFQSLCSMDLQLDIITFNIMIDGLFK-GGRKEDAMDLFAAIPA 813
Score = 48.5 bits (114), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 46/260 (17%), Positives = 101/260 (38%), Gaps = 16/260 (6%)
Query: 439 LITTEHGILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLC 498
++ + P Y ++ F G+ + ++ + VS D +I
Sbjct: 181 MVDGQDSSCSPDVVSYNIVINGFFNEGQVDKAYSLFLE-----MGVSPDVVTYNTIIDGL 235
Query: 499 ISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDA 558
+D+A D+ +M GV+ ++ Y +++ +A + + G++
Sbjct: 236 CKAQEVDRAEDVFQQMVEKGVKPNNVTYNTIIDGLCKAQEVDMAEGVFQKMVDKGVKPSN 295
Query: 559 SCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQ 618
Y ++ + A +F++M + + + H + ++ G + + Q
Sbjct: 296 VTYNTIIDGLCKAQAVDRAEGVFQQMIDRGV-KPDHVTYNTIIDGLCKAQAIDKAEGVFQ 354
Query: 619 EVKEGQRIDCGVH----DWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTG 674
Q ID GV + +I CK + + AE ++M G PN T++ ++ G
Sbjct: 355 -----QMIDKGVKPDNLTYTIIIDGLCKAQSVDRAEGVFQQMIDKGVKPNNGTYNCLIHG 409
Query: 675 YAAIGGKYTEVTELWGEMKS 694
Y + G++ EV + EM +
Sbjct: 410 YLST-GQWEEVVQRIKEMSA 428
>gi|224076898|ref|XP_002305039.1| predicted protein [Populus trichocarpa]
gi|222848003|gb|EEE85550.1| predicted protein [Populus trichocarpa]
Length = 800
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 58/279 (20%), Positives = 120/279 (43%), Gaps = 12/279 (4%)
Query: 472 HFLIKAEKENLQVSHDDAALGHV----ITLCISLGWLDQAHDLLDEMHLAGVRASSSVYA 527
H I EKE+ V H + L V + ++ G LD+A + L ++ G +
Sbjct: 145 HIDIDLEKED-TVKHRSSFLIQVYDALVKSYVTAGMLDEAINALFQIKRRGFLPHIFTFN 203
Query: 528 SLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKES 587
L+ I + A+ + +S G+ + Y ++++ + A ++F+EM+
Sbjct: 204 YLMNKLIANGKVDAALAIYKQLKSLGLNPNDYTYSIIIKAFCRKGSLVEASNVFQEMELC 263
Query: 588 KIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQ 647
+ + + + ++G N + ++LQ KEG I V+ + VI FC + M
Sbjct: 264 GVIPNAYA-YTTYIEGLCANQRSDFGYQVLQAWKEGN-IPIDVYAYVAVIRGFCNEMKMD 321
Query: 648 DAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEMKSFASSTSMNFDEEL 707
AE L M + +A+ + ++ GY G ++ L +M+S T+ +
Sbjct: 322 RAEVVLGDMEKQELISDARCYSELIRGYCK-AGDLSKALALHNDMESKGIKTNC----VI 376
Query: 708 LDSVLYTFVRGGFFARANEVVAMMEEGKMFIDKYKYRTL 746
+ ++L F G ++ E ++ ++F+D+ Y +
Sbjct: 377 VSTILQYFCEKGMHSQVVEEFKRFKDLRIFLDEVSYNIV 415
Score = 49.7 bits (117), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 53/241 (21%), Positives = 103/241 (42%), Gaps = 5/241 (2%)
Query: 454 YIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQAHDLLDE 513
Y+ +++ F K L EK+ L D +I G L +A L ++
Sbjct: 307 YVAVIRGFCNEMKMDRAEVVLGDMEKQEL--ISDARCYSELIRGYCKAGDLSKALALHND 364
Query: 514 MHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQKD 573
M G++ + + +++L+ + E +V + + I LD Y ++ + +
Sbjct: 365 MESKGIKTNCVIVSTILQYFCEKGMHSQVVEEFKRFKDLRIFLDEVSYNIVVDALCKLEK 424
Query: 574 TPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRIDCGVHDW 633
A+ L EMK ++ + L+ G + ++ +E+ EG+ ++ V +
Sbjct: 425 VDQAVALLDEMKGKQMDMDI-MHYTTLINGYCHVGKLVDAFRVFEEM-EGKGLEPDVVTF 482
Query: 634 NNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEMK 693
N ++ F ++ L +A K + M+S PNA T + M+ G IGGK TE + M+
Sbjct: 483 NILLAAFSRRGLANEALKLYEYMKSQDLKPNAITHNVMIEGL-CIGGKVTEAEAFFCNME 541
Query: 694 S 694
Sbjct: 542 D 542
Score = 42.0 bits (97), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 53/128 (41%), Gaps = 3/128 (2%)
Query: 442 TEHGILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISL 501
+E G+L IY KL++ E G+ L N++ S D G VIT C
Sbjct: 572 SERGLLMDRGYIY-KLLEKLCEEGEKDRALWLLKTMLDLNMEPSKD--MYGKVITACYRA 628
Query: 502 GWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCY 561
G + A + D + +G+ Y +++ NR E L +D + GI+ D +
Sbjct: 629 GDMRNAEAVFDILRKSGLTPDIFTYTTMINVCCRQNRLSEARNLFQDMKHRGIKPDLVTF 688
Query: 562 EALLQSKI 569
LL +
Sbjct: 689 TVLLDGHL 696
>gi|414864980|tpg|DAA43537.1| TPA: hypothetical protein ZEAMMB73_764503 [Zea mays]
Length = 649
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 92/459 (20%), Positives = 178/459 (38%), Gaps = 74/459 (16%)
Query: 329 YNCLLSCHLKFGDLNSASKMVLEMLQRAKEARNSLAAAMLPFNAV--GV--NNRTPSEQN 384
+N L+ + GD+++A +V M R L ++ +N+V G+ + R +
Sbjct: 195 HNVLIDARFRAGDVDAAIALVDSMANRG------LKPGIVTYNSVLKGLCKHRRFDKAKE 248
Query: 385 V-----NCTNSVDLENSGIIENHILSYEDFTKDRKFVALEAEVKRV------LQTLLGML 433
V C+ + D+ + I+ + + KF E + + V L+G+
Sbjct: 249 VFRTMDQCSVAPDVRSFNILIGGFCRVGEVKEAVKFYK-EMQHRYVTPDVVSFSCLIGLF 307
Query: 434 QKQVEL------ITTEHGI-LQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSH 486
++ E+ + G+ L P IY ++ F AG E ++ E +
Sbjct: 308 SRRGEMDHAGAYLREMKGLGLVPDGVIYTMVIGGFCRAGSMSEA----LRVRDEMVGF-- 361
Query: 487 DDAALGHVITLCISLGWLDQAHDLLD------EMHLAGVRASSSVYASLLKAYIEANRPR 540
L V+T L L + H LLD EM GV + +L+ Y
Sbjct: 362 --GCLPDVVTYNTLLNGLCKQHRLLDAEKLLNEMEERGVTPDLCTFTTLIHGYCRQGNFE 419
Query: 541 EVTALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEML 600
L ++ D Y +L+ + D A L+ +M +I H + +L
Sbjct: 420 NALQLFDTLLRQRLRPDVVTYNSLIDGMCRKGDLAKANELWDDMHAREI-LPNHITYSIL 478
Query: 601 VKG-CAQNHEAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSL 659
+ C + L + VK+G + + +N++I +C+ ++ ++ L++MR
Sbjct: 479 IDSHCEKGQVEDAFGFLDEMVKKGNLPN--IRTYNSIIKGYCRSGNVKKGQQFLQKMRQD 536
Query: 660 GHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEMKSFASSTSMNFDEELL--DSVLYTFVR 717
P+ TF++++ G Y + + G F ++E++ D+V Y +
Sbjct: 537 NVFPDLITFNTLIHG-------YIKEENMHGAFNVFNI-----MEKEMVRPDAVTYNMII 584
Query: 718 GGFFARANEVVAMMEEGKMF---------IDKYKYRTLF 747
GF + N M + G++F D+Y Y +L
Sbjct: 585 NGFSEQGN----MQDAGRVFKGMGDSGIEPDRYTYMSLI 619
>gi|255661132|gb|ACU25735.1| pentatricopeptide repeat-containing protein [Verbena perennis]
Length = 426
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/252 (19%), Positives = 120/252 (47%), Gaps = 19/252 (7%)
Query: 447 LQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQ---VSHDDAALGHVITLCISLGW 503
++P Y L++ + +A E H +++N++ V+++ + + TL
Sbjct: 180 IEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTL-----E 234
Query: 504 LDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEA 563
++A++L+ EM G+ +S Y++++ + + + L + RS+G+ +D +
Sbjct: 235 HEKANNLIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVDID----QV 290
Query: 564 LLQSKIVQKDTPGAL-HLFKEMKESKIPRSGHQEFEM-LVKGCAQNHEAGLMAKLLQEVK 621
L Q+ IV + G + H + + E K P + ++ + ++ G + EA + + Q +
Sbjct: 291 LYQTMIVAYERAGLVAHAKRLLHELKRPDNIPRDIAIHILAGAGRIEEATWVFR--QAID 348
Query: 622 EGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGK 681
G+ D V + +IH F K + + + +MR LG+ P++ ++ Y + +
Sbjct: 349 AGEVKDIXV--FERMIHLFSKYKKYGNVVEVFDKMRGLGYFPDSNVIALILNAYGKL-HE 405
Query: 682 YTEVTELWGEMK 693
+ + +++ EM+
Sbjct: 406 FDKANDVYMEMQ 417
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 62/315 (19%), Positives = 131/315 (41%), Gaps = 40/315 (12%)
Query: 447 LQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQ 506
L P Y L+ F + G +L K E++ +V D ++I L L +
Sbjct: 5 LSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQD--RVPGDLVLYSNLIELSRKLCDYSK 62
Query: 507 AHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQ 566
A + + +G Y +++ + +A RE +L+ + R+AG+ + + Y LL
Sbjct: 63 AISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVTPNTASYSTLLT 122
Query: 567 SKIVQKDTPGALHLFKEMKESK-------------------IPRSGHQEFEMLVK-GCAQ 606
+ + AL +F EM+E K + + + F + K G
Sbjct: 123 MYVENRKFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEP 182
Query: 607 N-----------HEAGLMAKLLQEVKEGQR--IDCGVHDWNNVIHFFCKKRLMQDAEKAL 653
N +A L + + + QR I+ V +N+++ + K + A +
Sbjct: 183 NVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLI 242
Query: 654 KRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEMKSFASSTSMNFDEELLDSVLY 713
+ M++ G PN+ T+ ++++ + + GK L+ +++ S+ ++ D+ L +++
Sbjct: 243 QEMQNRGIEPNSITYSTIISIWGKV-GKLDRAAMLFQKLR----SSGVDIDQVLYQTMIV 297
Query: 714 TFVRGGFFARANEVV 728
+ R G A A ++
Sbjct: 298 AYERAGLVAHAKRLL 312
>gi|254939549|ref|NP_001157212.1| pentatricopeptide repeat10 [Zea mays]
gi|218684531|gb|ACL01094.1| chloroplast pentatricopeptide repeat protein 10 [Zea mays]
gi|223948163|gb|ACN28165.1| unknown [Zea mays]
gi|413943497|gb|AFW76146.1| pentatricopeptide repeat10 [Zea mays]
Length = 786
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 91/183 (49%), Gaps = 14/183 (7%)
Query: 519 VRASSSVYAS--LLKAYIEAN----RPREVTALLRDARSAGIQLDASCYEALLQSKIVQK 572
V S +V+ S +L+ + AN R + ++ ++ G D + ++L
Sbjct: 551 VYGSGAVFPSWVILRTLVIANFKCRRLDGMETAFQEVKARGYNPDLVIFNSMLSIYAKNG 610
Query: 573 DTPGALHLFKEMKESKIPR---SGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRIDCG 629
A +F +K S + + + +M K C+++ EA K+L ++K Q +
Sbjct: 611 MYSKATEVFDSIKRSGLSPDLITYNSLMDMYAK-CSESWEA---EKILNQLKCSQTMKPD 666
Query: 630 VHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELW 689
V +N VI+ FCK+ L+++A++ L M + G P A T+H++V GY+++ ++E E+
Sbjct: 667 VVSYNTVINGFCKQGLVKEAQRVLSEMVADGMAPCAVTYHTLVGGYSSL-EMFSEAREVI 725
Query: 690 GEM 692
G M
Sbjct: 726 GYM 728
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 93/217 (42%), Gaps = 4/217 (1%)
Query: 494 VITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAG 553
++ +C G D +L+ M GV S Y +L+ AY + + SAG
Sbjct: 426 MLAVCGKRGMEDYVTRVLEGMRSCGVELSRDTYNTLIAAYGRCGSRTNAFKMYNEMTSAG 485
Query: 554 IQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLM 613
+ Y ALL Q D A + +M+ +K + Q + +L++ A+ +
Sbjct: 486 FTPCITTYNALLNVLSRQGDWSTAQSIVSKMR-TKGFKPNEQSYSLLLQCYAKGGNVAGI 544
Query: 614 AKLLQEV-KEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMV 672
A + EV G V VI F K R + E A + +++ G+ P+ F+SM+
Sbjct: 545 AAIENEVYGSGAVFPSWVILRTLVIANF-KCRRLDGMETAFQEVKARGYNPDLVIFNSML 603
Query: 673 TGYAAIGGKYTEVTELWGEMKSFASSTSMNFDEELLD 709
+ YA G Y++ TE++ +K S + L+D
Sbjct: 604 SIYAK-NGMYSKATEVFDSIKRSGLSPDLITYNSLMD 639
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 92/196 (46%), Gaps = 10/196 (5%)
Query: 502 GWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANR--PREVTALLRDARSAGIQLDAS 559
G ++A +L E+ GV + Y +L Y R PR + ALL + R+AG++ D
Sbjct: 188 GRYERALELFAELRRQGVAPTLVTYNVVLDVYGRMGRSWPR-IVALLDEMRAAGVEPDGF 246
Query: 560 CYEALLQSKIVQKDTPGALHLFKEMK-ESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQ 618
++ + A+ F+++K P + V G A N+ L ++L
Sbjct: 247 TASTVIAACCRDGLVDEAVAFFEDLKARGHAPCVVTYNALLQVFGKAGNYTEAL--RVLG 304
Query: 619 EVKE-GQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAA 677
E+++ G + D +N + + + ++A + L M S G LPNA T+++++T Y
Sbjct: 305 EMEQNGCQPD--AVTYNELAGTYARAGFFEEAARCLDTMASKGLLPNAFTYNTVMTAYGN 362
Query: 678 IGGKYTEVTELWGEMK 693
+ GK E L+ +MK
Sbjct: 363 V-GKVDEALALFDQMK 377
Score = 49.7 bits (117), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 58/255 (22%), Positives = 105/255 (41%), Gaps = 15/255 (5%)
Query: 502 GWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCY 561
G +A +L EM G + + Y L Y A E L S G+ +A Y
Sbjct: 294 GNYTEALRVLGEMEQNGCQPDAVTYNELAGTYARAGFFEEAARCLDTMASKGLLPNAFTY 353
Query: 562 EALLQSKIVQKDTPGALHLFKEMKESK-IPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEV 620
++ + AL LF +MK++ +P + +++ + +M ++L E+
Sbjct: 354 NTVMTAYGNVGKVDEALALFDQMKKTGFVPNV--NTYNLVLGMLGKKSRFTVMLEMLGEM 411
Query: 621 KEGQRIDCGVH--DWNNVIHFFCKKRLMQD-AEKALKRMRSLGHLPNAQTFHSMVTGYAA 677
R C + WN ++ C KR M+D + L+ MRS G + T+++++ Y
Sbjct: 412 ---SRSGCTPNRVTWNTMLAV-CGKRGMEDYVTRVLEGMRSCGVELSRDTYNTLIAAYGR 467
Query: 678 IGGKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMF 737
G + T +++ EM S + + LL+ R G ++ A +V+ M
Sbjct: 468 CGSR-TNAFKMYNEMTSAGFTPCITTYNALLN----VLSRQGDWSTAQSIVSKMRTKGFK 522
Query: 738 IDKYKYRTLFLKYHK 752
++ Y L Y K
Sbjct: 523 PNEQSYSLLLQCYAK 537
>gi|359482689|ref|XP_003632809.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g52620-like [Vitis vinifera]
Length = 879
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 73/347 (21%), Positives = 138/347 (39%), Gaps = 31/347 (8%)
Query: 443 EHGILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLG 502
E G+ P IY L+ + K K L+ AE + V D ++ I G
Sbjct: 442 ERGVF-PDAGIYNILMSGLCK--KFKLPAAKLLLAEMLDQSVLPDAFVYATLVDGFIRNG 498
Query: 503 WLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYE 562
LD+A L + G+ Y +++K Y + ++ A + + + D Y
Sbjct: 499 NLDEARKLFELTIEKGMNPGIVGYNAMIKGYCKFGMMKDAMACINRMKKRHLAPDEFTYS 558
Query: 563 ALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKE 622
++ + Q D GA +F+EM + K + + L+ G + + K+ +E++
Sbjct: 559 TVIDGYVKQHDLDGAQKMFREMVKMKC-KPNVVTYTSLINGFCRKGDLHRSLKIFREMQA 617
Query: 623 GQRIDCG----VHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAI 678
CG V ++ +I FCK+ + DA + M +PN TF+ +V G++
Sbjct: 618 -----CGLVPNVVTYSILIGSFCKEAKLIDAASFFEEMLMNKCVPNDVTFNYLVNGFSKN 672
Query: 679 GGKYTEVTELWGEMKSFASSTSMNFDEELL-----------DSVLYTFVRGGFFARANEV 727
G + ++E E + S +NF ++ +S+L + G F A ++
Sbjct: 673 GTR--AISEKGNEFQENKQSMFLNFFGRMISDGWAPRSAAYNSILICLCQYGMFRTALQL 730
Query: 728 VAMMEEGKMFIDKYKYRTLFLKYHKTLYKGKTPKFQ--TEAQLKKRE 772
M D + L H +G++ +++ L +RE
Sbjct: 731 SNKMTSKGCIPDSVSFVALL---HGVCLEGRSKEWKNIVSCNLNERE 774
Score = 46.6 bits (109), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 34/178 (19%), Positives = 75/178 (42%), Gaps = 2/178 (1%)
Query: 502 GWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCY 561
G ++ A+ L E+ L G + Y +++ + + + + LL + S G+ ++ Y
Sbjct: 253 GDMEMANGLFIELKLKGFLPTVETYGAIINGFCKKGDFKAIDRLLMEMNSRGLTVNVQVY 312
Query: 562 EALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVK 621
++ ++ A+ + M E + + L+ G ++ + +LL++
Sbjct: 313 NTIIDARYKHGHIVKAVETIEGMIECGC-KPDIVTYNTLISGSCRDGKVSEADQLLEQAL 371
Query: 622 EGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIG 679
G+ + + +IH +CK+ A L M GH P+ T+ ++V G G
Sbjct: 372 -GKGLMPNKFSYTPLIHAYCKQGGYDRASNWLIEMTERGHKPDLVTYGALVHGLVVAG 428
Score = 45.1 bits (105), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 63/309 (20%), Positives = 119/309 (38%), Gaps = 19/309 (6%)
Query: 449 PTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQAH 508
PT + Y ++ F + G K + L++ L V+ +I G + +A
Sbjct: 272 PTVETYGAIINGFCKKGDFKAIDRLLMEMNSRGLTVNVQ--VYNTIIDARYKHGHIVKAV 329
Query: 509 DLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSK 568
+ ++ M G + Y +L+ + E LL A G+ + Y L+ +
Sbjct: 330 ETIEGMIECGCKPDIVTYNTLISGSCRDGKVSEADQLLEQALGKGLMPNKFSYTPLIHAY 389
Query: 569 IVQKDTPGALHLFKEMKESKIPRSGHQ----EFEMLVKGCAQNHEAGLMAKLLQEVKE-G 623
Q A + EM E GH+ + LV G E + + +++ E G
Sbjct: 390 CKQGGYDRASNWLIEMTER-----GHKPDLVTYGALVHGLVVAGEVDVALTIREKMLERG 444
Query: 624 QRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYT 683
D G+ +N ++ CKK + A+ L M LP+A + ++V G+ G
Sbjct: 445 VFPDAGI--YNILMSGLCKKFKLPAAKLLLAEMLDQSVLPDAFVYATLVDGFIR-NGNLD 501
Query: 684 EVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFIDKYKY 743
E +L+ MN ++++ + + G A + M++ + D++ Y
Sbjct: 502 EARKLF----ELTIEKGMNPGIVGYNAMIKGYCKFGMMKDAMACINRMKKRHLAPDEFTY 557
Query: 744 RTLFLKYHK 752
T+ Y K
Sbjct: 558 STVIDGYVK 566
Score = 40.0 bits (92), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 34/156 (21%), Positives = 69/156 (44%), Gaps = 17/156 (10%)
Query: 604 CAQNHEAGLMAKLL---QEVKEGQRI-------DC--GVHDWNNVIHFFCKKRLMQDAEK 651
C N+ +M K L +++EG+++ C + +N +I +CKK M+ A
Sbjct: 201 CVDNYSTCIMVKGLCKEGKLEEGRKLIEDRWGQGCIPNIIFYNTLIDGYCKKGDMEMANG 260
Query: 652 ALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEMKSFASSTSMNFDEELLDSV 711
++ G LP +T+ +++ G+ G + + L EM +S + + ++ +++
Sbjct: 261 LFIELKLKGFLPTVETYGAIINGFCK-KGDFKAIDRLLMEM----NSRGLTVNVQVYNTI 315
Query: 712 LYTFVRGGFFARANEVVAMMEEGKMFIDKYKYRTLF 747
+ + G +A E + M E D Y TL
Sbjct: 316 IDARYKHGHIVKAVETIEGMIECGCKPDIVTYNTLI 351
>gi|255661146|gb|ACU25742.1| pentatricopeptide repeat-containing protein [Verbena hispida]
Length = 426
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/252 (19%), Positives = 120/252 (47%), Gaps = 19/252 (7%)
Query: 447 LQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQ---VSHDDAALGHVITLCISLGW 503
++P Y L++ + +A E H +++N++ V+++ + + TL
Sbjct: 180 IEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTL-----E 234
Query: 504 LDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEA 563
++A++L+ EM G+ +S Y++++ + + + L + RS+G+ +D +
Sbjct: 235 HEKANNLIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVDID----QV 290
Query: 564 LLQSKIVQKDTPGAL-HLFKEMKESKIPRSGHQEFEM-LVKGCAQNHEAGLMAKLLQEVK 621
L Q+ IV + G + H + + E K P + ++ + ++ G + EA + + Q +
Sbjct: 291 LYQTMIVAYERAGLVAHAKRLLHELKRPDNIPRDIAIHILAGAGRIEEATWVFR--QAID 348
Query: 622 EGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGK 681
G+ D V + +IH F K + + + +MR LG+ P++ ++ Y + +
Sbjct: 349 AGEVKDITV--FERMIHLFSKYKKYGNVVEVFNKMRGLGYFPDSNVIALVLNAYGKL-HE 405
Query: 682 YTEVTELWGEMK 693
+ + +++ EM+
Sbjct: 406 FDKANDVYMEMQ 417
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 63/315 (20%), Positives = 131/315 (41%), Gaps = 40/315 (12%)
Query: 447 LQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQ 506
L P Y L+ F + G +L K E++ +V D ++I L L +
Sbjct: 5 LSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQD--RVPGDLVLYSNLIELSRKLCDYSK 62
Query: 507 AHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQ 566
A + + +G Y +++ + +A RE +L+ + R+AG+ + + Y LL
Sbjct: 63 AISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVTPNTASYSTLLT 122
Query: 567 SKIVQKDTPGALHLFKEMKESK-------------------IPRSGHQEFEMLVK-GCAQ 606
+ K AL +F EM+E K + + + F + K G
Sbjct: 123 MYVENKKFLEALSIFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEP 182
Query: 607 N-----------HEAGLMAKLLQEVKEGQR--IDCGVHDWNNVIHFFCKKRLMQDAEKAL 653
N +A L + + + QR I+ V +N+++ + K + A +
Sbjct: 183 NVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLI 242
Query: 654 KRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEMKSFASSTSMNFDEELLDSVLY 713
+ M++ G PN+ T+ ++++ + + GK L+ +++ S+ ++ D+ L +++
Sbjct: 243 QEMQNRGIEPNSITYSTIISIWGKV-GKLDRAAMLFQKLR----SSGVDIDQVLYQTMIV 297
Query: 714 TFVRGGFFARANEVV 728
+ R G A A ++
Sbjct: 298 AYERAGLVAHAKRLL 312
>gi|255661134|gb|ACU25736.1| pentatricopeptide repeat-containing protein [Verbena bracteata]
gi|255661138|gb|ACU25738.1| pentatricopeptide repeat-containing protein [Verbena halei]
gi|255661140|gb|ACU25739.1| pentatricopeptide repeat-containing protein [Verbena officinalis]
Length = 426
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/252 (19%), Positives = 120/252 (47%), Gaps = 19/252 (7%)
Query: 447 LQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQ---VSHDDAALGHVITLCISLGW 503
++P Y L++ + +A E H +++N++ V+++ + + TL
Sbjct: 180 IEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTL-----E 234
Query: 504 LDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEA 563
++A++L+ EM G+ +S Y++++ + + + L + RS+G+ +D +
Sbjct: 235 HEKANNLIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVDID----QV 290
Query: 564 LLQSKIVQKDTPGAL-HLFKEMKESKIPRSGHQEFEM-LVKGCAQNHEAGLMAKLLQEVK 621
L Q+ IV + G + H + + E K P + ++ + ++ G + EA + + Q +
Sbjct: 291 LYQTMIVAYERAGLVAHAKRLLHELKRPDNIPRDIAIHILAGAGRIEEATWVFR--QAID 348
Query: 622 EGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGK 681
G+ D V + +IH F K + + + +MR LG+ P++ ++ Y + +
Sbjct: 349 AGEVKDITV--FERMIHLFSKYKKYGNVVEVFDKMRGLGYFPDSNVIALILNAYGKL-HE 405
Query: 682 YTEVTELWGEMK 693
+ + +++ EM+
Sbjct: 406 FDKANDVYMEMQ 417
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 63/315 (20%), Positives = 131/315 (41%), Gaps = 40/315 (12%)
Query: 447 LQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQ 506
L P Y L+ F + G +L K E++ +V D ++I L L +
Sbjct: 5 LSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQD--RVPGDLVLYSNLIELSRKLCDYSK 62
Query: 507 AHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQ 566
A + + +G Y +++ + +A RE +L+ + R+AG+ + + Y LL
Sbjct: 63 AISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVTPNTASYSTLLT 122
Query: 567 SKIVQKDTPGALHLFKEMKESK-------------------IPRSGHQEFEMLVK-GCAQ 606
+ K AL +F EM+E K + + + F + K G
Sbjct: 123 MYVENKKFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEP 182
Query: 607 N-----------HEAGLMAKLLQEVKEGQR--IDCGVHDWNNVIHFFCKKRLMQDAEKAL 653
N +A L + + + QR I+ V +N+++ + K + A +
Sbjct: 183 NVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLI 242
Query: 654 KRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEMKSFASSTSMNFDEELLDSVLY 713
+ M++ G PN+ T+ ++++ + + GK L+ +++ S+ ++ D+ L +++
Sbjct: 243 QEMQNRGIEPNSITYSTIISIWGKV-GKLDRAAMLFQKLR----SSGVDIDQVLYQTMIV 297
Query: 714 TFVRGGFFARANEVV 728
+ R G A A ++
Sbjct: 298 AYERAGLVAHAKRLL 312
>gi|449457341|ref|XP_004146407.1| PREDICTED: pentatricopeptide repeat-containing protein At2g13420,
mitochondrial-like [Cucumis sativus]
gi|449523938|ref|XP_004168980.1| PREDICTED: pentatricopeptide repeat-containing protein At2g13420,
mitochondrial-like [Cucumis sativus]
Length = 506
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/230 (20%), Positives = 93/230 (40%), Gaps = 12/230 (5%)
Query: 494 VITLCISLGWLDQAH------DLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLR 547
V + I L +AH D L +M G+ + + Y S++K R + L+
Sbjct: 283 VTSFSIVLHVYSRAHKPELSLDKLKQMKELGISPTVATYTSVIKCLCSCGRLEDGENLIE 342
Query: 548 DARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQN 607
+ +GI + Y + +KD GAL L+K+M+E + + +L+
Sbjct: 343 EMVRSGISPSPTTYNCFFKEYRGRKDGAGALRLYKKMREDCLCAPSLHTYNILLALFLNL 402
Query: 608 HEAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQT 667
+ + +L ++KE + + + +IH C+K+ +A + M G LP T
Sbjct: 403 DKKETLKELWNDMKESG-VGPDLDSYTTIIHGLCEKQRWSEACQFFVEMIERGFLPQKVT 461
Query: 668 FHSMVTGYAAIGGKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVR 717
F + G +++ W +K S + EL + + ++R
Sbjct: 462 FEMLYRGLIQ-----SDMLRTWRRLKKKLEEESKTYGSELKNYHIKPYMR 506
>gi|297805706|ref|XP_002870737.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297316573|gb|EFH46996.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 680
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 72/344 (20%), Positives = 136/344 (39%), Gaps = 36/344 (10%)
Query: 447 LQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQ 506
L P Y L+ +F + G +L K E++ +VS D ++I L L +
Sbjct: 188 LAPDRYTYSTLITSFGKEGMFDSALSWLQKMEQD--RVSGDLVLYSNLIELSRRLCDYSK 245
Query: 507 AHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQ 566
A + + +G+ Y S++ Y +A +E L+++ AG+ + Y LL
Sbjct: 246 AISIFSRLKRSGITPDLVAYNSMINVYGKAKLFKEARVLIKEMNEAGVSPNTVSYSTLLS 305
Query: 567 SKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKL---LQEVKEG 623
+ AL +F EMKE P + + C +M + L VKE
Sbjct: 306 VYVENHKFLEALSVFAEMKEVNCP--------LDLTTC------NIMIDVYGQLDMVKEA 351
Query: 624 QR---------IDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTG 674
R I+ V +N ++ + + L +A + M+ N T+++M+
Sbjct: 352 DRLFWSLRKMDIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKI 411
Query: 675 YAAIGGKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEG 734
Y ++ + T L EM+ S + + +++ + + G RA + +
Sbjct: 412 YGKT-MEHEKATNLVQEMQ----SRGIEPNAITYSTIISIWGKAGKLDRAATLFQKLRSS 466
Query: 735 KMFIDKYKYRTLFLKYHKTLYKGKTPKFQTEAQLKK---REAAL 775
+ ID+ Y+T+ + Y + G + E +L RE A+
Sbjct: 467 GVEIDQVLYQTMIVAYERVGLMGHAKRLLHELKLPDNIPRETAI 510
>gi|147812173|emb|CAN61517.1| hypothetical protein VITISV_033966 [Vitis vinifera]
Length = 635
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/234 (20%), Positives = 100/234 (42%), Gaps = 12/234 (5%)
Query: 447 LQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQ 506
LQP Y + A+ + G+ + +++ + N+Q + + +I G + +
Sbjct: 244 LQPDAVTYNTIATAYAQNGEASQAEGIILEMQNSNVQPNERTCCI--IIGGYCKEGKIKE 301
Query: 507 AHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQ 566
A + M G++ + V+ SL+K +I+A V +L G++ D + ++
Sbjct: 302 ALQFVYRMKDLGLQPNLVVFNSLIKGFIDAVDRDGVNEVLTLMEEFGVKPDVITFSTIMN 361
Query: 567 SKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRI 626
+ +F +M +++I H + +L KG + E ++L + I
Sbjct: 362 AWSAAGFMDKCREIFDDMVKARIQPDAHV-YSILAKGYVRAGEPEKAEEILNAM-----I 415
Query: 627 DCGVHD----WNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYA 676
G H + +I+ +C M+ A K ++M G PN +TF +++ GY
Sbjct: 416 KSGFHPNVVMFTTIINGWCSAGRMEYAIKIFEKMCECGIAPNLKTFETLIWGYG 469
Score = 53.9 bits (128), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 40/186 (21%), Positives = 83/186 (44%), Gaps = 1/186 (0%)
Query: 494 VITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAG 553
++ + I G + +LD + G + S Y +LL A + +++ G
Sbjct: 78 LMNIMIEKGRPQEVQSILDSIIEGGHKPSLVTYTTLLAALTIQKHFDSIHSIISQVEENG 137
Query: 554 IQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLM 613
++ D+ + A++ + + A+ F +MKES + F L+KG E
Sbjct: 138 MEPDSIFFNAVINAFSESGNMQEAMKYFWKMKESG-SKPTTSTFNTLIKGYGIAGEPEES 196
Query: 614 AKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVT 673
KLLZ + + + + + +N ++ +C K + A + +M + G P+A T++++ T
Sbjct: 197 QKLLZLMSQDENVRPNLRTYNVLVRAWCNKXNIMKAWNVVYKMVASGLQPDAVTYNTIAT 256
Query: 674 GYAAIG 679
YA G
Sbjct: 257 AYAQNG 262
Score = 53.1 bits (126), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 67/312 (21%), Positives = 132/312 (42%), Gaps = 20/312 (6%)
Query: 445 GILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWL 504
G +P+ Y L+ A L K + H +I +EN + D VI G +
Sbjct: 101 GGHKPSLVTYTTLLAA-LTIQKHFDSIHSIISQVEEN-GMEPDSIFFNAVINAFSESGNM 158
Query: 505 DQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLR-DARSAGIQLDASCYEA 563
+A +M +G + ++S + +L+K Y A P E LL ++ ++ + Y
Sbjct: 159 QEAMKYFWKMKESGSKPTTSTFNTLIKGYGIAGEPEESQKLLZLMSQDENVRPNLRTYNV 218
Query: 564 LLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQE---- 619
L+++ + + A ++ +M S + + + + AQN EA ++ E
Sbjct: 219 LVRAWCNKXNIMKAWNVVYKMVASGL-QPDAVTYNTIATAYAQNGEASQAEGIILEMQNS 277
Query: 620 -VKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAI 678
V+ +R C +I +CK+ +++A + + RM+ LG PN F+S++ G+
Sbjct: 278 NVQPNERTCC------IIIGGYCKEGKIKEALQFVYRMKDLGLQPNLVVFNSLIKGFIDA 331
Query: 679 GGKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFI 738
+ V E+ M+ F + D +++ + GF + E+ M + ++
Sbjct: 332 VDR-DGVNEVLTLMEEFG----VKPDVITFSTIMNAWSAAGFMDKCREIFDDMVKARIQP 386
Query: 739 DKYKYRTLFLKY 750
D + Y L Y
Sbjct: 387 DAHVYSILAKGY 398
Score = 49.7 bits (117), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 37/176 (21%), Positives = 77/176 (43%), Gaps = 3/176 (1%)
Query: 447 LQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQ 506
LQP ++ L+K F++A + L E+ V D ++ + G++D+
Sbjct: 314 LQPNLVVFNSLIKGFIDAVDRDGVNEVLTLMEE--FGVKPDVITFSTIMNAWSAAGFMDK 371
Query: 507 AHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQ 566
++ D+M A ++ + VY+ L K Y+ A P + +L +G + + ++
Sbjct: 372 CREIFDDMVKARIQPDAHVYSILAKGYVRAGEPEKAEEILNAMIKSGFHPNVVMFTTIIN 431
Query: 567 SKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKE 622
A+ +F++M E I + FE L+ G + + ++LQ ++E
Sbjct: 432 GWCSAGRMEYAIKIFEKMCECGIA-PNLKTFETLIWGYGEARQPWKSEEVLQIMEE 486
>gi|125542792|gb|EAY88931.1| hypothetical protein OsI_10416 [Oryza sativa Indica Group]
Length = 796
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 53/255 (20%), Positives = 103/255 (40%), Gaps = 14/255 (5%)
Query: 502 GWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCY 561
G L +A LL M G+ + Y +L+ A+ ++ T ++ + G + D Y
Sbjct: 257 GMLGEARALLARMKRDGIAPTQPTYNTLVSAFARLGWIKQATKVVESMTAYGFEPDLRTY 316
Query: 562 EALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVK 621
L A L EM+ + LV C + + +LL+E++
Sbjct: 317 NVLAMGLCQAGKVDEAFRLKDEMERLGTALPDVVTYNTLVDACFKWRCSSDALRLLEEMR 376
Query: 622 E-GQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGG 680
+ G + H N V+ CK+ +++A L+++ G P+ T+++++ Y G
Sbjct: 377 DKGVKPTLVTH--NIVVKSLCKEGKLEEALGKLEKIAEEGLAPDVITYNTLIDAYCKAGN 434
Query: 681 ---KYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMF 737
+T + E+ G+ + D L++VLY + + A E++ +
Sbjct: 435 VAKAFTLMDEMVGK--------GLKMDTFTLNTVLYNLCKMKRYEDAEELLHSPPQRGFV 486
Query: 738 IDKYKYRTLFLKYHK 752
D+ Y T+ Y K
Sbjct: 487 PDEVSYGTVMAAYFK 501
Score = 47.4 bits (111), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 99/450 (22%), Positives = 172/450 (38%), Gaps = 38/450 (8%)
Query: 249 MKPNTNTFNIALAGCLLFETTRKAEQLLDIMPRIGVKADSNLLIIMAHIYERNGRREELR 308
+ PN TFN+ + T A L M G+ D+ + + + R G E R
Sbjct: 204 LHPNHYTFNLLVHTHCSKGTLADALATLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEAR 263
Query: 309 KLQRHIDEAVNLSDIQFRQFYNCLLSCHLKFGDLNSASKMVLEMLQRAKEAR----NSLA 364
L + ++ Q YN L+S + G + A+K+V M E N LA
Sbjct: 264 ALLARMKRD-GIAPTQ--PTYNTLVSAFARLGWIKQATKVVESMTAYGFEPDLRTYNVLA 320
Query: 365 AAMLPFNAVGVNNRTPSEQNVNCTNSVDLENSGIIENHILSYEDFTKDRKFVALEAEVKR 424
+ V R E +E G +++Y ++ R
Sbjct: 321 MGLCQAGKVDEAFRLKDE----------MERLGTALPDVVTYNTLVDACFKWRCSSDALR 370
Query: 425 VLQTLLGMLQKQVELITTEHGILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQV 484
+L+ M K V+ H I +VK+ + GK +E L K +E L
Sbjct: 371 LLEE---MRDKGVKPTLVTHNI----------VVKSLCKEGKLEEALGKLEKIAEEGL-- 415
Query: 485 SHDDAALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTA 544
+ D +I G + +A L+DEM G++ + ++L + R +
Sbjct: 416 APDVITYNTLIDAYCKAGNVAKAFTLMDEMVGKGLKMDTFTLNTVLYNLCKMKRYEDAEE 475
Query: 545 LLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKG- 603
LL G D Y ++ + + + AL L+ +M E K+ S + L+KG
Sbjct: 476 LLHSPPQRGFVPDEVSYGTVMAAYFKEYNPEPALRLWDQMIERKLIPS-ISTYNTLIKGL 534
Query: 604 CAQNHEAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLP 663
C + KL + V++G D +N +IH +CK+ +++A + +M P
Sbjct: 535 CRMERLKEAIDKLNEFVEKGLVPDETT--YNIIIHAYCKEGDLENAFRFHNKMVENSFKP 592
Query: 664 NAQTFHSMVTGYAAIG--GKYTEVTELWGE 691
+ T ++++ G G K ++ E W E
Sbjct: 593 DVVTCNTLMNGLCLHGKLDKALKLFESWVE 622
Score = 40.8 bits (94), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 73/162 (45%), Gaps = 7/162 (4%)
Query: 522 SSSVYASLLKAYIEANRPREVTALLRD-ARSAGIQLDASCYEALLQSKIVQKDT-PGA-L 578
+S + + L AY P LL R G++ A+L + T P A L
Sbjct: 134 TSPLADAALSAYARLRLPHLAAQLLHSLRRRRGVRPSLQAANAVLSALSRSPSTLPQASL 193
Query: 579 HLFKEMKESKIPRSGHQEFEMLVKG-CAQNHEAGLMAKLLQEVKEGQRIDCGVHDWNNVI 637
+F+ + E ++ H F +LV C++ A +A L +G + +N ++
Sbjct: 194 DVFRSLIELRL-HPNHYTFNLLVHTHCSKGTLADALATL--STMQGFGLSPDAVTYNTLL 250
Query: 638 HFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIG 679
+ C+K ++ +A L RM+ G P T++++V+ +A +G
Sbjct: 251 NAHCRKGMLGEARALLARMKRDGIAPTQPTYNTLVSAFARLG 292
>gi|9755842|emb|CAC01928.1| 67kD chloroplastic RNA-binding protein, P67 [Arabidopsis thaliana]
Length = 702
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/241 (21%), Positives = 102/241 (42%), Gaps = 7/241 (2%)
Query: 448 QPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQA 507
+P ++ A+ AG +A E ++ D +I + G D
Sbjct: 242 EPDNVTMAAMIDAYGRAGNVDMALSLYDRARTEKWRI--DAVTFSTLIRIYGVSGNYDGC 299
Query: 508 HDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQS 567
++ +EM GV+ + +Y L+ + A RP + + +D + G + S Y AL+++
Sbjct: 300 LNIYEEMKALGVKPNLVIYNRLIDSMGRAKRPWQAKIIYKDLITNGFTPNWSTYAALVRA 359
Query: 568 KIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRID 627
+ AL +++EMKE + + + L+ CA ++ Q++K + D
Sbjct: 360 YGRARYGDDALAIYREMKEKGLSLTVIL-YNTLLSMCADIGYVDEAFEIFQDMKNCETCD 418
Query: 628 CGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTE 687
++++I + + +AE AL +MR G P S++ Y GK +V +
Sbjct: 419 PDSWTFSSLITVYACSGRVSEAEAALLQMREAGFEPTLFVLTSVIQCY----GKAKQVDD 474
Query: 688 L 688
+
Sbjct: 475 V 475
>gi|224127136|ref|XP_002329409.1| predicted protein [Populus trichocarpa]
gi|222870459|gb|EEF07590.1| predicted protein [Populus trichocarpa]
Length = 599
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 71/157 (45%), Gaps = 3/157 (1%)
Query: 453 IYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQAHDLLD 512
IY L+ + + G E + +KE L+ D G V+ G LD+A + L+
Sbjct: 309 IYTALIDSNAKCGNMGEAMLLFERMKKEGLE--PDVVTYGVVVNCMCKSGRLDEAMEYLE 366
Query: 513 EMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQK 572
+ GV ++ +Y+SL+ +A R E L + G D+ CY AL+ +
Sbjct: 367 FCRVNGVAVNAMLYSSLIDGLGKAGRVHEAEKLFEEMVKKGCPPDSYCYNALIDALAKCG 426
Query: 573 DTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHE 609
T AL FK M++ ++ + + +++ G + H+
Sbjct: 427 KTDEALAFFKRMEDEGCDQTVYT-YTIMINGLFREHK 462
Score = 48.9 bits (115), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 65/309 (21%), Positives = 127/309 (41%), Gaps = 29/309 (9%)
Query: 439 LITTEHGILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLC 498
L E+G + P Y ++K + + GKT++ E N V+ D +I C
Sbjct: 190 LEVMENGKIGPDVVTYNTMIKGYCQVGKTQKAFEKFRDMELRN--VAPDKITYMTLIQAC 247
Query: 499 ISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDA 558
+ G D L EM G+ Y+ ++ + + E A+ G +++
Sbjct: 248 YAEGDFDLCLSLYHEMDENGLEIPPHAYSLVIGGLCKEGKCVEGYAVFEKMIQKGCKVNV 307
Query: 559 SCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQN--HEAGLMAKL 616
+ Y AL+ S + A+ LF+ MK+ + E +++ G N ++G + +
Sbjct: 308 AIYTALIDSNAKCGNMGEAMLLFERMKKEGL------EPDVVTYGVVVNCMCKSGRLDEA 361
Query: 617 LQEVKEGQRIDCGVHD--WNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTG 674
++ ++ + V+ ++++I K + +AEK + M G P++ +++++
Sbjct: 362 MEYLEFCRVNGVAVNAMLYSSLIDGLGKAGRVHEAEKLFEEMVKKGCPPDSYCYNALIDA 421
Query: 675 YAAIGGKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTF---VRGGFFARANEVVAMM 731
A GK E + M ++E D +YT+ + G F NE M
Sbjct: 422 LAKC-GKTDEALAFFKRM-----------EDEGCDQTVYTYTIMINGLFREHKNEEALKM 469
Query: 732 EEGKMFIDK 740
+ M IDK
Sbjct: 470 WD--MMIDK 476
Score = 48.1 bits (113), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 61/269 (22%), Positives = 111/269 (41%), Gaps = 36/269 (13%)
Query: 457 LVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQAHDLLDEMHL 516
L+K+F G +EL ++ + KEN V ++ ++ +++ A +L+ M
Sbjct: 138 LIKSFGSLGMVEELL-WVWRGMKEN-GVEPSLFTYNFLLNGLVNSVFIESAERVLEVMEN 195
Query: 517 AGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQKDTPG 576
+ Y +++K Y + + ++ RD + D Y L+Q+ + D
Sbjct: 196 GKIGPDVVTYNTMIKGYCQVGKTQKAFEKFRDMELRNVAPDKITYMTLIQACYAEGDFDL 255
Query: 577 ALHLFKEMKES--KIPR-----------------SGHQEFE-MLVKGCA----------- 605
L L+ EM E+ +IP G+ FE M+ KGC
Sbjct: 256 CLSLYHEMDENGLEIPPHAYSLVIGGLCKEGKCVEGYAVFEKMIQKGCKVNVAIYTALID 315
Query: 606 QNHEAGLM--AKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLP 663
N + G M A LL E + + ++ V + V++ CK + +A + L+ R G
Sbjct: 316 SNAKCGNMGEAMLLFERMKKEGLEPDVVTYGVVVNCMCKSGRLDEAMEYLEFCRVNGVAV 375
Query: 664 NAQTFHSMVTGYAAIGGKYTEVTELWGEM 692
NA + S++ G G+ E +L+ EM
Sbjct: 376 NAMLYSSLIDGLGK-AGRVHEAEKLFEEM 403
>gi|32489921|emb|CAE05513.1| OSJNBa0038P21.6 [Oryza sativa Japonica Group]
Length = 648
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/178 (21%), Positives = 76/178 (42%), Gaps = 1/178 (0%)
Query: 502 GWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCY 561
G + L++ M G+ + + L+ AY + + D ++ G+ D +
Sbjct: 218 GCFANMNSLVNLMVSKGIVPNHRFFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTF 277
Query: 562 EALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVK 621
++ S ALH F M + +P S + L++GC + E +L+ E+
Sbjct: 278 ATVISSLCRIGRLDDALHKFNHMVDIGVPPS-EAVYRCLIQGCCNHGELVKAKELISEMM 336
Query: 622 EGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIG 679
GV ++++I+ K+ + + + + M G PN TF+S++ GY +G
Sbjct: 337 NKDIPPPGVKYFSSIINNLFKEGRVAEGKDIMDLMVQTGQRPNVVTFNSLMEGYCLVG 394
Score = 46.6 bits (109), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 52/98 (53%), Gaps = 2/98 (2%)
Query: 597 FEMLVKGCAQNHEAGLMAKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRM 656
+ L+ G ++ E +L ++ E Q + V +N++I CK + M +E+ L++M
Sbjct: 67 YNTLIDGFSKEGEVDKAYELFYKMIE-QSVSPDVVTYNSLIDGLCKTKEMVKSERVLEQM 125
Query: 657 RSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEMKS 694
G PN +T++S++ GY+ G + E ++ EM S
Sbjct: 126 VDAGIRPNNKTYNSLIYGYST-AGMWKESVRVFKEMSS 162
Score = 43.1 bits (100), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 43/231 (18%), Positives = 92/231 (39%), Gaps = 7/231 (3%)
Query: 517 AGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQKDTPG 576
G+ Y +L+ + + + L + D Y +L+ K+
Sbjct: 58 TGLGPDVCSYNTLIDGFSKEGEVDKAYELFYKMIEQSVSPDVVTYNSLIDGLCKTKEMVK 117
Query: 577 ALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRIDCGVHDWNNV 636
+ + ++M ++ I R ++ + L+ G + ++ +E+ I C V + N+
Sbjct: 118 SERVLEQMVDAGI-RPNNKTYNSLIYGYSTAGMWKESVRVFKEMSSSGLIPC-VVNCNSF 175
Query: 637 IHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEMKSFA 696
IH C+ +++A+ M G PN ++ +++ GYAA G + + L M S
Sbjct: 176 IHALCRHNRIKEAKDIFDSMVLKGPKPNIISYSTLLHGYAA-EGCFANMNSLVNLMVSKG 234
Query: 697 SSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFIDKYKYRTLF 747
+ F L+++ + R G +A + M+ M D + T+
Sbjct: 235 IVPNHRFFNILINA----YARCGMMDKAMLIFEDMQNKGMIPDTVTFATVI 281
>gi|410110143|gb|AFV61151.1| pentatricopeptide repeat-containing protein 123, partial [Lippia
velutina]
Length = 382
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/255 (20%), Positives = 117/255 (45%), Gaps = 25/255 (9%)
Query: 447 LQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQ---VSHDDAALGHVITLCISLGW 503
++P Y L++ + +A E H +++N++ V+++ + + TL
Sbjct: 141 IEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTL-----E 195
Query: 504 LDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEA 563
++A++L+ EM G+ +S Y++++ + + + L + RS+G+++D +
Sbjct: 196 HEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEID----QI 251
Query: 564 LLQSKIVQKDTPG----ALHLFKEMKE-SKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQ 618
L Q+ IV + G A L E+K IPR ++ G + EA + + Q
Sbjct: 252 LFQTMIVAYERAGLVAHAKRLLHELKRPDNIPRDTAIH---ILAGAGRIEEATYVFR--Q 306
Query: 619 EVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAI 678
V G+ D V + ++H K + + + +MR LG+ P++ ++ Y +
Sbjct: 307 AVDAGEVKDITV--FERMVHLLSKYKKYSNVVEVFDKMRGLGYFPDSDVIAIVLNAYGKL 364
Query: 679 GGKYTEVTELWGEMK 693
++ + +++ EM+
Sbjct: 365 -QEFDKANDVYMEMQ 378
Score = 45.1 bits (105), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 54/278 (19%), Positives = 115/278 (41%), Gaps = 38/278 (13%)
Query: 484 VSHDDAALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVT 543
V D ++I L L +A + + +G Y +++ + +A RE
Sbjct: 1 VPGDLVLYSNLIELSRKLCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREAR 60
Query: 544 ALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESK--------------- 588
+L+ + ++AG+ + + Y LL + K AL +F EM+E K
Sbjct: 61 SLISEMKTAGVMPNTTSYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVY 120
Query: 589 ----IPRSGHQEFEMLVK-GCAQN-----------HEAGLMAKLLQEVKEGQR--IDCGV 630
+ + + F + K G N +A L + + + QR I+ V
Sbjct: 121 GQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNV 180
Query: 631 HDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWG 690
+N+++ + K + A ++ M+S G PN+ T+ ++++ + + GK L+
Sbjct: 181 VTYNSMMMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKV-GKLDRAAMLFQ 239
Query: 691 EMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVV 728
+++ S+ + D+ L +++ + R G A A ++
Sbjct: 240 KLR----SSGVEIDQILFQTMIVAYERAGLVAHAKRLL 273
>gi|255661144|gb|ACU25741.1| pentatricopeptide repeat-containing protein [Verbena hastata]
Length = 426
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/252 (19%), Positives = 120/252 (47%), Gaps = 19/252 (7%)
Query: 447 LQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQ---VSHDDAALGHVITLCISLGW 503
++P Y L++ + +A E H +++N++ V+++ + + TL
Sbjct: 180 IEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTL-----E 234
Query: 504 LDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEA 563
++A++L+ EM G+ +S Y++++ + + + L + RS+G+ +D +
Sbjct: 235 HEKANNLIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVDID----QV 290
Query: 564 LLQSKIVQKDTPGAL-HLFKEMKESKIPRSGHQEFEM-LVKGCAQNHEAGLMAKLLQEVK 621
L Q+ IV + G + H + + E K P + ++ + ++ G + EA + + Q +
Sbjct: 291 LYQTMIVAYERAGLVAHAKRLLHELKRPDNIPRDIAIHILAGAGRIEEATWVFR--QAID 348
Query: 622 EGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGK 681
G+ D V + +IH F K + + + +MR LG+ P++ ++ Y + +
Sbjct: 349 AGEVKDITV--FERMIHLFSKYKKYGNVVEVFDKMRGLGYFPDSNVIALILNAYGKL-HE 405
Query: 682 YTEVTELWGEMK 693
+ + +++ EM+
Sbjct: 406 FDKANDVYMEMQ 417
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 63/315 (20%), Positives = 131/315 (41%), Gaps = 40/315 (12%)
Query: 447 LQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQ 506
L P Y L+ F + G +L K E++ +V D ++I L L +
Sbjct: 5 LSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQD--RVPGDLVLYSNLIELSRKLCDYSK 62
Query: 507 AHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQ 566
A + + +G Y +++ + +A RE +L+ + R+AG+ + + Y LL
Sbjct: 63 AISIFSRLKRSGFMPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVTPNTASYSTLLT 122
Query: 567 SKIVQKDTPGALHLFKEMKESK-------------------IPRSGHQEFEMLVK-GCAQ 606
+ K AL +F EM+E K + + + F + K G
Sbjct: 123 MYVENKKFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEP 182
Query: 607 N-----------HEAGLMAKLLQEVKEGQR--IDCGVHDWNNVIHFFCKKRLMQDAEKAL 653
N +A L + + + QR I+ V +N+++ + K + A +
Sbjct: 183 NVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLI 242
Query: 654 KRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEMKSFASSTSMNFDEELLDSVLY 713
+ M++ G PN+ T+ ++++ + + GK L+ +++ S+ ++ D+ L +++
Sbjct: 243 QEMQNRGIEPNSITYSTIISIWGKV-GKLDRAAMLFQKLR----SSGVDIDQVLYQTMIV 297
Query: 714 TFVRGGFFARANEVV 728
+ R G A A ++
Sbjct: 298 AYERAGLVAHAKRLL 312
>gi|255661142|gb|ACU25740.1| pentatricopeptide repeat-containing protein [Verbena canescens]
Length = 426
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/252 (19%), Positives = 120/252 (47%), Gaps = 19/252 (7%)
Query: 447 LQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQ---VSHDDAALGHVITLCISLGW 503
++P Y L++ + +A E H +++N++ V+++ + + TL
Sbjct: 180 IEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTL-----E 234
Query: 504 LDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEA 563
++A++L+ EM G+ +S Y++++ + + + L + RS+G+ +D +
Sbjct: 235 HEKANNLIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVDID----QV 290
Query: 564 LLQSKIVQKDTPGAL-HLFKEMKESKIPRSGHQEFEM-LVKGCAQNHEAGLMAKLLQEVK 621
L Q+ IV + G + H + + E K P + ++ + ++ G + EA + + Q +
Sbjct: 291 LYQTMIVAYERAGLVAHAKRLLHELKRPDNIPRDIAIHILAGAGRIEEATWVFR--QAID 348
Query: 622 EGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGK 681
G+ D V + +IH F K + + + +MR LG+ P++ ++ Y + +
Sbjct: 349 AGEVKDITV--FERMIHLFSKYKKYGNVVEVFDKMRGLGYFPDSNVIALILNAYGKL-HE 405
Query: 682 YTEVTELWGEMK 693
+ + +++ EM+
Sbjct: 406 FDKANDVYMEMQ 417
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 63/315 (20%), Positives = 130/315 (41%), Gaps = 40/315 (12%)
Query: 447 LQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQ 506
L P Y L+ F + G +L K E++ +V D ++I L L +
Sbjct: 5 LSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQD--RVPGDLVLYSNLIELSRKLCDYSK 62
Query: 507 AHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQ 566
A + + +G Y +++ + +A RE +L+ + R+AG+ + Y LL
Sbjct: 63 AISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVTPTTASYSTLLT 122
Query: 567 SKIVQKDTPGALHLFKEMKESK-------------------IPRSGHQEFEMLVK-GCAQ 606
+ K AL +F EM+E K + + + F + K G
Sbjct: 123 MYVENKKFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEP 182
Query: 607 N-----------HEAGLMAKLLQEVKEGQR--IDCGVHDWNNVIHFFCKKRLMQDAEKAL 653
N +A L + + + QR I+ V +N+++ + K + A +
Sbjct: 183 NVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLI 242
Query: 654 KRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEMKSFASSTSMNFDEELLDSVLY 713
+ M++ G PN+ T+ ++++ + + GK L+ +++ S+ ++ D+ L +++
Sbjct: 243 QEMQNRGIEPNSITYSTIISIWGKV-GKLDRAAMLFQKLR----SSGVDIDQVLYQTMIV 297
Query: 714 TFVRGGFFARANEVV 728
+ R G A A ++
Sbjct: 298 AYERAGLVAHAKRLL 312
>gi|225451352|ref|XP_002274891.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 577
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 64/286 (22%), Positives = 109/286 (38%), Gaps = 23/286 (8%)
Query: 447 LQPTEKIYIKLVKAFLEAGKTKE---LTHFLIKAEKENLQVSHDDAALGHVITLCISLGW 503
+ P I+ +V A + GK E + +IK E V+++ GH +
Sbjct: 265 IMPNVVIFSTVVDALCKEGKVMEAHDVVDMMIKRGVEPNVVTYNALMDGHCLR-----SE 319
Query: 504 LDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEA 563
+D+A + D M G Y++L+ Y + R + L + + + Y
Sbjct: 320 MDEAVKVFDTMVCKGFAPDVVSYSTLINGYCKIQRIEKAMYLFEEMCRKELIPNTVTYST 379
Query: 564 LLQSKIVQKDTPGALHLFKEM-KESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKE 622
L+ A+ LF EM +IP + +L+ +N LL+ + E
Sbjct: 380 LMHGLCHVGRLQDAIALFHEMVTRGQIPD--FVSYCILLDYLCKNRRLDEAIALLKAI-E 436
Query: 623 GQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKY 682
G +D + + VI C+ ++ A + S G PN T+ M+ G G
Sbjct: 437 GSNMDPDIQIYTIVIDGMCRAGELEAARDLFSNLSSKGLHPNVWTYTIMINGLCQ-QGLL 495
Query: 683 TEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVV 728
E ++L+GEMK S + Y + GF R NE +
Sbjct: 496 AEASKLFGEMKRKGYSP---------NGCTYNLITRGFL-RNNETL 531
Score = 47.8 bits (112), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 58/289 (20%), Positives = 110/289 (38%), Gaps = 41/289 (14%)
Query: 497 LCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQL 556
LC+ G + + L D+M G + + Y +L+ + LLR Q
Sbjct: 139 LCVE-GKIGEVLHLFDKMIGEGFQPNVVTYGTLINGLCKVGSTSAAIRLLRSMEQGNCQP 197
Query: 557 DASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRS---GHQEFEMLVKGCAQNHEAGLM 613
D Y +++ S + A +LF EM I S + L C H L+
Sbjct: 198 DVVVYTSIIDSLCKDRQVTQAFNLFSEMIHQGISPSIFTYNSLIHALCNLCEWKHVTALL 257
Query: 614 AKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVT 673
+++ +I V ++ V+ CK+ + +A + M G PN T+++++
Sbjct: 258 NEMVNS-----KIMPNVVIFSTVVDALCKEGKVMEAHDVVDMMIKRGVEPNVVTYNALMD 312
Query: 674 GYAAIGGKYTEVTELWGEM--KSFASSTSMNFDEELLDSVLYTFVRGGF--FARANEVVA 729
G+ + + E +++ M K FA D V Y+ + G+ R + +
Sbjct: 313 GH-CLRSEMDEAVKVFDTMVCKGFAP-----------DVVSYSTLINGYCKIQRIEKAMY 360
Query: 730 MMEE---GKMFIDKYKYRTL-------------FLKYHKTLYKGKTPKF 762
+ EE ++ + Y TL +H+ + +G+ P F
Sbjct: 361 LFEEMCRKELIPNTVTYSTLMHGLCHVGRLQDAIALFHEMVTRGQIPDF 409
Score = 39.3 bits (90), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 53/116 (45%), Gaps = 3/116 (2%)
Query: 577 ALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRIDCGVHDWNNV 636
AL F M P S ++L+ H + +++ L + I ++ N +
Sbjct: 43 ALSSFNRMLHMHPPPSIADFTKLLISITKMKHYSTVLS--LSHQMDSFGIPPNIYTLNIL 100
Query: 637 IHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEM 692
I+ FC + + A L ++ LGH PN TF++++ G + GK EV L+ +M
Sbjct: 101 INSFCHLQRLGFAFSVLAKILKLGHQPNIATFNTLIRGL-CVEGKIGEVLHLFDKM 155
>gi|225430029|ref|XP_002281569.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g25630-like [Vitis vinifera]
Length = 635
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/234 (20%), Positives = 100/234 (42%), Gaps = 12/234 (5%)
Query: 447 LQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQ 506
LQP Y + A+ + G+ + +++ + N+Q + + +I G + +
Sbjct: 244 LQPDAVTYNTIATAYAQNGEASQAEGIILEMQNSNVQPNERTCCI--IIGGYCKEGKIKE 301
Query: 507 AHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQ 566
A + M G++ + V+ SL+K +I+A V +L G++ D + ++
Sbjct: 302 ALQFVYRMKDLGLQPNLVVFNSLIKGFIDAVDRDGVNEVLTLMEEFGVKPDVITFSTIMN 361
Query: 567 SKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRI 626
+ +F +M +++I H + +L KG + E ++L + I
Sbjct: 362 AWSAAGFMDKCREIFDDMVKARIQPDAHV-YSILAKGYVRAGEPEKAEEILNAM-----I 415
Query: 627 DCGVHD----WNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYA 676
G H + +I+ +C M+ A K ++M G PN +TF +++ GY
Sbjct: 416 KSGFHPNVVIFTTIINGWCSAGRMEYAIKIFEKMCECGIAPNLKTFETLIWGYG 469
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 68/312 (21%), Positives = 133/312 (42%), Gaps = 20/312 (6%)
Query: 445 GILQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWL 504
G +P+ Y L+ A L K + H +I +EN + D VI G +
Sbjct: 101 GGHKPSLVTYTTLLAA-LTIQKHFDSIHSIISQVEEN-GMEPDSIFFNAVINAFSESGNM 158
Query: 505 DQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLR-DARSAGIQLDASCYEA 563
+A +M +G + ++S + +L+K Y A P E LL ++ ++ + Y
Sbjct: 159 QEAMKYFWKMKESGSKPTTSTFNTLIKGYGIAGEPEESQKLLELMSQDENVRPNLRTYNV 218
Query: 564 LLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQE---- 619
L+++ +K+ A ++ +M S + + + + AQN EA ++ E
Sbjct: 219 LVRAWCNKKNIMKAWNVVYKMVASGL-QPDAVTYNTIATAYAQNGEASQAEGIILEMQNS 277
Query: 620 -VKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAI 678
V+ +R C +I +CK+ +++A + + RM+ LG PN F+S++ G+
Sbjct: 278 NVQPNERTCC------IIIGGYCKEGKIKEALQFVYRMKDLGLQPNLVVFNSLIKGFIDA 331
Query: 679 GGKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFI 738
+ V E+ M+ F + D +++ + GF + E+ M + ++
Sbjct: 332 VDR-DGVNEVLTLMEEFG----VKPDVITFSTIMNAWSAAGFMDKCREIFDDMVKARIQP 386
Query: 739 DKYKYRTLFLKY 750
D + Y L Y
Sbjct: 387 DAHVYSILAKGY 398
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/186 (21%), Positives = 84/186 (45%), Gaps = 1/186 (0%)
Query: 494 VITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAG 553
++ + I G + +LD + G + S Y +LL A + +++ G
Sbjct: 78 LMNIMIEKGRPQEVQSILDSIIEGGHKPSLVTYTTLLAALTIQKHFDSIHSIISQVEENG 137
Query: 554 IQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLM 613
++ D+ + A++ + + A+ F +MKES + F L+KG E
Sbjct: 138 MEPDSIFFNAVINAFSESGNMQEAMKYFWKMKESG-SKPTTSTFNTLIKGYGIAGEPEES 196
Query: 614 AKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVT 673
KLL+ + + + + + +N ++ +C K+ + A + +M + G P+A T++++ T
Sbjct: 197 QKLLELMSQDENVRPNLRTYNVLVRAWCNKKNIMKAWNVVYKMVASGLQPDAVTYNTIAT 256
Query: 674 GYAAIG 679
YA G
Sbjct: 257 AYAQNG 262
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 37/176 (21%), Positives = 77/176 (43%), Gaps = 3/176 (1%)
Query: 447 LQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQ 506
LQP ++ L+K F++A + L E+ V D ++ + G++D+
Sbjct: 314 LQPNLVVFNSLIKGFIDAVDRDGVNEVLTLMEE--FGVKPDVITFSTIMNAWSAAGFMDK 371
Query: 507 AHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQ 566
++ D+M A ++ + VY+ L K Y+ A P + +L +G + + ++
Sbjct: 372 CREIFDDMVKARIQPDAHVYSILAKGYVRAGEPEKAEEILNAMIKSGFHPNVVIFTTIIN 431
Query: 567 SKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKE 622
A+ +F++M E I + FE L+ G + + ++LQ ++E
Sbjct: 432 GWCSAGRMEYAIKIFEKMCECGIA-PNLKTFETLIWGYGEARQPWKSEEVLQIMEE 486
>gi|297826581|ref|XP_002881173.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297327012|gb|EFH57432.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 917
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 94/228 (41%), Gaps = 14/228 (6%)
Query: 454 YIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQAHDLLDE 513
Y L+ A + G+ F I A+ ++ + + VI G D+A +L E
Sbjct: 377 YNTLLDAICKGGQMD--LAFEILAQMPAKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGE 434
Query: 514 MHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQKD 573
M + Y +LL Y + R E +LR+ S GI+ D Y ALL Q
Sbjct: 435 MRYLNIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGK 494
Query: 574 TPGALHLFKEMK-ESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKE----GQRIDC 628
+F EMK E +P + L+ G ++ GL + ++ +E G R D
Sbjct: 495 YDEVKKVFAEMKREHVLPN--LLTYSTLIDGYSK---GGLYKEAMEVFREFKSAGLRAD- 548
Query: 629 GVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYA 676
V ++ +I CK L+ A + M G PN T++S++ +
Sbjct: 549 -VVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDAFG 595
Score = 48.9 bits (115), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 67/337 (19%), Positives = 137/337 (40%), Gaps = 17/337 (5%)
Query: 443 EHGILQPTEKIYIKLVKAFLEAG-KTKELTHFLIKAEKENLQVSHDDAALGHVITLCISL 501
E+G L+P Y ++ A + G + K++ F + ++ +Q D ++ +C
Sbjct: 296 EYG-LRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNCVQ--PDRITFNSLLAVCSRG 352
Query: 502 GWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCY 561
G + A +L DEM + Y +LL A + + +L + I + Y
Sbjct: 353 GLWEAARNLFDEMSNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPAKRIMPNVVSY 412
Query: 562 EALLQSKIVQKDTPGALHLFKEMKESKIP--RSGHQEFEMLVKGCAQNHEAGLMAKLLQE 619
++ AL+LF EM+ I R + + ++ EA +L+E
Sbjct: 413 STVIDGFAKAGRFDEALNLFGEMRYLNIALDRVSYNTLLSIYTKVGRSEEA---LDILRE 469
Query: 620 VKE-GQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAI 678
+ G + D V +N ++ + K+ + +K M+ LPN T+ +++ GY+
Sbjct: 470 MASVGIKKD--VVTYNALLGGYGKQGKYDEVKKVFAEMKREHVLPNLLTYSTLIDGYSK- 526
Query: 679 GGKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFI 738
GG Y E E++ E K S + D L +++ + G A ++ M + +
Sbjct: 527 GGLYKEAMEVFREFK----SAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISP 582
Query: 739 DKYKYRTLFLKYHKTLYKGKTPKFQTEAQLKKREAAL 775
+ Y ++ + ++ ++ + L +AL
Sbjct: 583 NVVTYNSIIDAFGRSATMERSADYSNGGSLPFSSSAL 619
Score = 45.4 bits (106), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 56/260 (21%), Positives = 112/260 (43%), Gaps = 29/260 (11%)
Query: 526 YASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQS--------KIVQKDTPGA 577
+++L+ AY + E ++ + G++ + Y A++ + K V K
Sbjct: 271 FSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQVAK----- 325
Query: 578 LHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGL--MAKLLQEVKEGQRIDCGVHDWNN 635
F EM+ + + + F L+ C++ GL A+ L + +RI+ V +N
Sbjct: 326 --FFDEMQRNCV-QPDRITFNSLLAVCSR---GGLWEAARNLFDEMSNRRIEQDVFSYNT 379
Query: 636 VIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEMKSF 695
++ CK M A + L +M + +PN ++ +++ G+A G++ E L+GEM+
Sbjct: 380 LLDAICKGGQMDLAFEILAQMPAKRIMPNVVSYSTVIDGFAK-AGRFDEALNLFGEMRYL 438
Query: 696 ASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFIDKYKYRTLFLKYHKTLY 755
++ D +++L + + G A +++ M + D Y L Y K
Sbjct: 439 ----NIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGK--- 491
Query: 756 KGKTPKFQTEAQLKKREAAL 775
+GK + + KRE L
Sbjct: 492 QGKYDEVKKVFAEMKREHVL 511
>gi|224056220|ref|XP_002298762.1| predicted protein [Populus trichocarpa]
gi|222846020|gb|EEE83567.1| predicted protein [Populus trichocarpa]
Length = 643
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 68/324 (20%), Positives = 132/324 (40%), Gaps = 21/324 (6%)
Query: 454 YIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQAHDLLDE 513
Y L+ A + G+ +E K E+E + + + + + + W ++ L +
Sbjct: 36 YTSLITACVSNGRYREAVMVFKKMEEEGCKPTLITYNVILNVYGKMGMPW-NKIKGLFEG 94
Query: 514 MHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQSKIVQKD 573
M AGV Y +L+ + E A+ +D +S G D Y ALL +
Sbjct: 95 MKNAGVLPDEYTYNTLITCCRRGSLHEEAAAVFKDMKSMGFVPDKVTYNALLDVYGKSRR 154
Query: 574 TPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRIDCGVHDW 633
T A+ + +EM+ + S + L+ A++ +L ++ EG I+ V +
Sbjct: 155 TKEAMEVLREMEVNGCSPS-IVTYNSLISAYARDGLLKEAMELKNQMVEGG-INLDVFTY 212
Query: 634 NNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEMK 693
++ F + + A + MR+ G PN TF++++ + GK+ E+ +++ E+K
Sbjct: 213 TTLLSGFVRAGKDESAMRVFAEMRAAGCKPNICTFNALIKMHGN-RGKFAEMMKVFEEIK 271
Query: 694 SFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFIDKYKYRTLFLKYHKT 753
+ D +++L F + G + + V M+ ++ Y TL Y +
Sbjct: 272 NSCCVP----DIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERDTYNTLISAYSRC 327
Query: 754 --------LYK-----GKTPKFQT 764
+YK G TP T
Sbjct: 328 GSFDQAMDIYKRMLEAGITPDLST 351
Score = 47.8 bits (112), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 56/258 (21%), Positives = 103/258 (39%), Gaps = 49/258 (18%)
Query: 494 VITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAG 553
+I++ G + A LL+++H G Y SL+ A + R RE + + G
Sbjct: 4 IISMLGKEGKVSVAASLLNDLHKDGFGLDVYAYTSLITACVSNGRYREAVMVFKKMEEEG 63
Query: 554 IQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLM 613
C L+ ++ L+++ +M G N GL
Sbjct: 64 ------CKPTLITYNVI-------LNVYGKM------------------GMPWNKIKGLF 92
Query: 614 AKLLQEVKEGQRIDCGV----HDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFH 669
EG + + GV + +N +I + L ++A K M+S+G +P+ T++
Sbjct: 93 --------EGMK-NAGVLPDEYTYNTLITCCRRGSLHEEAAAVFKDMKSMGFVPDKVTYN 143
Query: 670 SMVTGYAAIGGKYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVA 729
+++ Y + E E+ EM+ S S+ +S++ + R G A E+
Sbjct: 144 ALLDVYGK-SRRTKEAMEVLREMEVNGCSPSI----VTYNSLISAYARDGLLKEAMELKN 198
Query: 730 MMEEGKMFIDKYKYRTLF 747
M EG + +D + Y TL
Sbjct: 199 QMVEGGINLDVFTYTTLL 216
Score = 46.6 bits (109), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 55/249 (22%), Positives = 98/249 (39%), Gaps = 7/249 (2%)
Query: 502 GWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCY 561
G + + EM AG Y +L+ AY + + + AGI D S Y
Sbjct: 293 GMDSEVSGVFKEMKRAGFVPERDTYNTLISAYSRCGSFDQAMDIYKRMLEAGITPDLSTY 352
Query: 562 EALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVK 621
A+L + + +F EMK+ + + + L+ A E G M L +E+
Sbjct: 353 NAVLAALARGGLWEQSEKIFAEMKDGRC-KPNELTYCSLLHAYANGKEIGRMLALAEEIC 411
Query: 622 EGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGK 681
G I+ ++ K L+ +AE A ++ G P+ T ++M++ Y
Sbjct: 412 SGV-IEPHAVLLKTLVLVNSKCDLLVEAEVAFLELKRKGFSPDLSTLNAMLSIYGR-RQM 469
Query: 682 YTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFIDKY 741
+T+ E+ M + S+ +S++Y R F R+ EV+ + + D
Sbjct: 470 FTKTNEILNFMNESGFTPSL----ATYNSLMYMHSRSENFERSEEVLKEILAKGIKPDTI 525
Query: 742 KYRTLFLKY 750
Y T+ Y
Sbjct: 526 SYNTVIFAY 534
>gi|357441365|ref|XP_003590960.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355480008|gb|AES61211.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 590
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 63/307 (20%), Positives = 121/307 (39%), Gaps = 10/307 (3%)
Query: 448 QPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQA 507
+PT Y L++A + G E L + L+ D V+ G LD+A
Sbjct: 213 KPTVITYTILIEATITQGGIDEAMKLLDEMLSRGLR--PDRYTYNVVVNGMCKEGMLDRA 270
Query: 508 HDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQS 567
+ L + G A S Y LL+ + + L+ D G + + Y L+ +
Sbjct: 271 FEFLSRISKNGCVAGVSTYNILLRDLLNEGKWEYGEKLMSDMLVKGCEPNPITYSTLITA 330
Query: 568 KIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRID 627
A ++ K MKE + G+ ++ L+ + + L + L ++ G +
Sbjct: 331 LCRDGKIDEAKNVLKVMKEKALAPDGYS-YDPLISALCREGKVDLAIEFLDDMISGGHLP 389
Query: 628 CGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTE 687
+ +N+++ CK +A +++ +G PNA +++++ + G K +
Sbjct: 390 -DILSYNSILASLCKNGNADEALNIFEKLGEVGCPPNAGSYNTLFGALWSSGDKIRALGM 448
Query: 688 LWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANE-VVAMMEEGKMFIDKYKYRTL 746
+ + S ++ DE +S++ R G +A E +V M E K Y T+
Sbjct: 449 ILEML-----SNGIDPDEITYNSLISCLCRDGLVDQAIELLVDMFESEKCQPTVISYNTV 503
Query: 747 FLKYHKT 753
L K
Sbjct: 504 LLGLCKV 510
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 62/262 (23%), Positives = 105/262 (40%), Gaps = 13/262 (4%)
Query: 448 QPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQA 507
+P Y L+ A GK E + L K KE ++ D + +I+ G +D A
Sbjct: 318 EPNPITYSTLITALCRDGKIDEAKNVL-KVMKEK-ALAPDGYSYDPLISALCREGKVDLA 375
Query: 508 HDLLDEM----HLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEA 563
+ LD+M HL + + +S+ ASL K E + G +A Y
Sbjct: 376 IEFLDDMISGGHLPDILSYNSILASLCKN----GNADEALNIFEKLGEVGCPPNAGSYNT 431
Query: 564 LLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEG 623
L + D AL + EM + I + L+ ++ +LL ++ E
Sbjct: 432 LFGALWSSGDKIRALGMILEMLSNGID-PDEITYNSLISCLCRDGLVDQAIELLVDMFES 490
Query: 624 QRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYT 683
++ V +N V+ CK + + DA + L M + G LPN T+ ++ G G +Y
Sbjct: 491 EKCQPTVISYNTVLLGLCKVQRIIDAIEVLAAMVNEGCLPNETTYTLLIQGIGFAGWRYD 550
Query: 684 --EVTELWGEMKSFASSTSMNF 703
E+ L M + + + F
Sbjct: 551 AMELANLLVNMDAISEDSFKRF 572
>gi|297840237|ref|XP_002888000.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297333841|gb|EFH64259.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 189
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 77/169 (45%), Gaps = 18/169 (10%)
Query: 545 LLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGC 604
L R+ G+ D Y L+Q D A LFKEM +P + + L+ G
Sbjct: 3 LFREMSQRGLVGDTVTYTTLIQGLFQAGDCDMAQELFKEMVSDGVPPN-LMTYNSLLDGL 61
Query: 605 AQNHEAGLMAKLL--QEVKEGQRIDCG---------VHDWNNVIHFFCKKRLMQDAEKAL 653
N G + K L +V++G + C V +N +I C+K L Q+A L
Sbjct: 62 CNN---GKLEKTLVVGKVEDGWDLFCSLSLKGVKPNVVTYNTMISGLCRKGLNQEAYALL 118
Query: 654 KRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEMKS--FASSTS 700
K+M+ G LP++ T+++++ + G K +EL EM+S FA S
Sbjct: 119 KKMKEDGPLPDSGTYNTLIRAHLRDGDKAAS-SELIREMRSCEFAGDAS 166
>gi|147771991|emb|CAN69054.1| hypothetical protein VITISV_022964 [Vitis vinifera]
Length = 586
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 64/286 (22%), Positives = 109/286 (38%), Gaps = 23/286 (8%)
Query: 447 LQPTEKIYIKLVKAFLEAGKTKE---LTHFLIKAEKENLQVSHDDAALGHVITLCISLGW 503
+ P I+ +V A + GK E + +IK E V+++ GH +
Sbjct: 274 IMPNVVIFSTVVDALCKEGKVMEAHDVVDMMIKRGVEPNVVTYNALMDGHCLR-----SE 328
Query: 504 LDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEA 563
+D+A + D M G Y++L+ Y + R + L + + + Y
Sbjct: 329 MDEAVKVFDTMVCKGFAPDVVSYSTLINGYCKIQRIEKAMYLFEEMCRKELIPNTVTYST 388
Query: 564 LLQSKIVQKDTPGALHLFKEM-KESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKE 622
L+ A+ LF EM +IP + +L+ +N LL+ + E
Sbjct: 389 LMHGLCHVGRLQDAIALFHEMVTRGQIP--DFVSYCILLDYLCKNRRLDEAIALLKAI-E 445
Query: 623 GQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKY 682
G +D + + VI C+ ++ A + S G PN T+ M+ G G
Sbjct: 446 GSNMDPDIQIYTIVIDGMCRAGELEAARDLFSNLSSKGLHPNVWTYTIMINGLCQ-QGLL 504
Query: 683 TEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVV 728
E ++L+GEMK S + Y + GF R NE +
Sbjct: 505 AEASKLFGEMKRKGYSP---------NGCTYNLITRGFL-RNNETL 540
Score = 47.8 bits (112), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 58/289 (20%), Positives = 110/289 (38%), Gaps = 41/289 (14%)
Query: 497 LCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQL 556
LC+ G + + L D+M G + + Y +L+ + LLR Q
Sbjct: 148 LCVE-GKIGEVLHLFDKMIGEGFQPNVVTYGTLINGLCKVGSTSAAIRLLRSMEQGNCQP 206
Query: 557 DASCYEALLQSKIVQKDTPGALHLFKEMKESKIPRS---GHQEFEMLVKGCAQNHEAGLM 613
D Y +++ S + A +LF EM I S + L C H L+
Sbjct: 207 DVVVYTSIIDSLCKDRQVTQAFNLFSEMIHQGISPSIFTYNSLIHALCNLCEWKHVTALL 266
Query: 614 AKLLQEVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVT 673
+++ +I V ++ V+ CK+ + +A + M G PN T+++++
Sbjct: 267 NEMVNS-----KIMPNVVIFSTVVDALCKEGKVMEAHDVVDMMIKRGVEPNVVTYNALMD 321
Query: 674 GYAAIGGKYTEVTELWGEM--KSFASSTSMNFDEELLDSVLYTFVRGGF--FARANEVVA 729
G+ + + E +++ M K FA D V Y+ + G+ R + +
Sbjct: 322 GH-CLRSEMDEAVKVFDTMVCKGFAP-----------DVVSYSTLINGYCKIQRIEKAMY 369
Query: 730 MMEE---GKMFIDKYKYRTL-------------FLKYHKTLYKGKTPKF 762
+ EE ++ + Y TL +H+ + +G+ P F
Sbjct: 370 LFEEMCRKELIPNTVTYSTLMHGLCHVGRLQDAIALFHEMVTRGQIPDF 418
Score = 39.3 bits (90), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 53/116 (45%), Gaps = 3/116 (2%)
Query: 577 ALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRIDCGVHDWNNV 636
AL F M P S ++L+ H + +++ L + I ++ N +
Sbjct: 52 ALSSFNRMLHMHPPPSIADFTKLLISITKMKHYSTVLS--LSHQMDSFGIPPNIYTLNIL 109
Query: 637 IHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEM 692
I+ FC + + A L ++ LGH PN TF++++ G + GK EV L+ +M
Sbjct: 110 INSFCHLQRLGFAFSVLAKILKLGHQPNIATFNTLIRGL-CVEGKIGEVLHLFDKM 164
>gi|255661188|gb|ACU25763.1| pentatricopeptide repeat-containing protein [Aloysia virgata]
Length = 426
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/195 (23%), Positives = 89/195 (45%), Gaps = 22/195 (11%)
Query: 505 DQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEAL 564
++A++L+ EM G+ +S Y++++ + + + L + RS+G+++D + L
Sbjct: 236 EKANNLIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEID----QVL 291
Query: 565 LQSKIVQKDTPG----ALHLFKEMKE-SKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQE 619
Q+ IV + G A L E+K IPR ++ G + EA + + Q
Sbjct: 292 YQTMIVAYERAGLVAHAKRLLHELKSPDNIPRDTAIH---ILAGAGRIEEATYVFR--QA 346
Query: 620 VKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAI- 678
+ G+ D V + +IH F K + + + +MR LG+ P++ ++ Y +
Sbjct: 347 IDAGEVKDITV--FERMIHLFSKYKKYANLIEVFDKMRGLGYFPDSNVIALVLNAYGKLH 404
Query: 679 -----GGKYTEVTEL 688
G Y E+ E+
Sbjct: 405 EFDKANGVYMEMQEV 419
Score = 48.5 bits (114), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 63/315 (20%), Positives = 129/315 (40%), Gaps = 40/315 (12%)
Query: 447 LQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQ 506
L P Y L+ F + G +L K E++ +V D ++I L L +
Sbjct: 5 LSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQD--RVPGDLVLYSNLIELSRKLCDYSK 62
Query: 507 AHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQ 566
A + + +G Y +++ + +A RE +L+ + R+AG+ + + Y LL
Sbjct: 63 AISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVMPNTASYSTLLT 122
Query: 567 SKIVQKDTPGALHLFKEMKESK-------------------IPRSGHQEFEMLVK-GCAQ 606
+ K AL +F EM+E K + + + F + K G
Sbjct: 123 MYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEP 182
Query: 607 N-----------HEAGLMAKLLQEVKEGQR--IDCGVHDWNNVIHFFCKKRLMQDAEKAL 653
N +A L + + + QR I V +N+++ + K + A +
Sbjct: 183 NVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIVQNVVTYNSMMMIYGKTLEHEKANNLI 242
Query: 654 KRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEMKSFASSTSMNFDEELLDSVLY 713
+ M++ G PN+ T+ ++++ + + GK L+ +++ S+ + D+ L +++
Sbjct: 243 QEMQNRGIEPNSITYSTIISIWGKV-GKLDRAAMLFQKLR----SSGVEIDQVLYQTMIV 297
Query: 714 TFVRGGFFARANEVV 728
+ R G A A ++
Sbjct: 298 AYERAGLVAHAKRLL 312
>gi|224069551|ref|XP_002326371.1| predicted protein [Populus trichocarpa]
gi|222833564|gb|EEE72041.1| predicted protein [Populus trichocarpa]
Length = 726
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/237 (21%), Positives = 106/237 (44%), Gaps = 6/237 (2%)
Query: 447 LQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQ 506
L P+ Y L+ +AG + L+ KEN V + TLC S +++
Sbjct: 455 LTPSLVTYNSLIHVQCKAGHFDS-AYKLLDLLKENGLVPDQWTYSVFIDTLCKS-KRMEE 512
Query: 507 AHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQ 566
A DL + + G++A+ +Y +L+ + +A + E +LL S ++S Y +L+
Sbjct: 513 ACDLFNSLKEKGIKANEVMYTALIDGHCKAGKIDEAISLLERMHSEDCLPNSSTYNSLIY 572
Query: 567 SKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLL-QEVKEGQR 625
+ L + + M + + + + +L++ + + ++ Q V G +
Sbjct: 573 GVCKEGKVQEGLSMVENMSKMGV-KPTVATYTILIEEMLREGDFDHANRVFNQMVSFGHK 631
Query: 626 IDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKY 682
D V+ + IH +C +++AE + RM G +P++ T+ +++ Y +G Y
Sbjct: 632 PD--VYTYTAFIHTYCTSGNVKEAEGMMARMIEAGVMPDSLTYTLLISAYERLGLAY 686
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 46/247 (18%), Positives = 104/247 (42%), Gaps = 7/247 (2%)
Query: 501 LGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASC 560
+G + +A+ + ++ AG+ S Y SL+ Y N + + G + +
Sbjct: 227 MGNIVEANLYVSKIFQAGLSPDSFTYTSLILGYCRNNDVNSAYKVFNMMPNKGCRRNEVS 286
Query: 561 YEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEV 620
Y ++ + LFK+M+E + + + +++ N L E+
Sbjct: 287 YTTIIHGLCEAGRIDEGISLFKKMREDDCYPTV-RTYTVIIHALFGNDRNLEGMDLFNEM 345
Query: 621 KEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGG 680
+E + + VH + ++ CK+R + ++ + L M G +P+ T+++++ GY G
Sbjct: 346 RE-RSCEPNVHTYTVMVDAMCKERKLDESRRILNEMMEKGLVPSVVTYNALIRGYCE-EG 403
Query: 681 KYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMFIDK 740
+ E+ G M+ S + +E + ++ F + +A +++ M E K+
Sbjct: 404 RIEAALEILGLME----SNNCRPNERTYNELICGFSKRKHVHKAMTLLSKMLESKLTPSL 459
Query: 741 YKYRTLF 747
Y +L
Sbjct: 460 VTYNSLI 466
>gi|255661164|gb|ACU25751.1| pentatricopeptide repeat-containing protein [Glandularia subincana]
Length = 426
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/252 (19%), Positives = 120/252 (47%), Gaps = 19/252 (7%)
Query: 447 LQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQ---VSHDDAALGHVITLCISLGW 503
++P Y L++ + +A E H +++N++ V+++ + + TL
Sbjct: 180 IEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTL-----E 234
Query: 504 LDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEA 563
++A++L+ EM G+ +S Y++++ + + + L + RS+G+ +D +
Sbjct: 235 HEKANNLIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVDID----QV 290
Query: 564 LLQSKIVQKDTPGAL-HLFKEMKESKIPRSGHQEFEM-LVKGCAQNHEAGLMAKLLQEVK 621
L Q+ IV + G + H + + E K P + ++ + ++ G + EA + + Q +
Sbjct: 291 LYQTMIVAYERAGLVAHAKRLLHELKRPDNIPRDIAIHILAGAGRIEEATWVFR--QAID 348
Query: 622 EGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGK 681
G+ D V + +IH F K + + + +MR LG+ P++ ++ Y + +
Sbjct: 349 AGEVKDITV--FERMIHLFSKYKKYGNVVEVFDKMRGLGYFPDSNVIALVLNAYGKL-HE 405
Query: 682 YTEVTELWGEMK 693
+ + +++ EM+
Sbjct: 406 FDKANDVYMEMQ 417
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 63/315 (20%), Positives = 130/315 (41%), Gaps = 40/315 (12%)
Query: 447 LQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQ 506
L P Y L+ F + G +L K E++ +V D ++I L L +
Sbjct: 5 LSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQD--RVPGDLVLYSNLIELSRKLCDYSK 62
Query: 507 AHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQ 566
A + + +G Y +++ + +A RE +L+ + R+AG+ + + Y LL
Sbjct: 63 AISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVTPNTASYSTLLT 122
Query: 567 SKIVQKDTPGALHLFKEMKESK-------------------IPRSGHQEFEMLVK-GCAQ 606
+ K AL F EM+E K + + + F + K G
Sbjct: 123 MYVENKKFLEALSXFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEP 182
Query: 607 N-----------HEAGLMAKLLQEVKEGQR--IDCGVHDWNNVIHFFCKKRLMQDAEKAL 653
N +A L + + + QR I+ V +N+++ + K + A +
Sbjct: 183 NVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLI 242
Query: 654 KRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWGEMKSFASSTSMNFDEELLDSVLY 713
+ M++ G PN+ T+ ++++ + + GK L+ +++ S+ ++ D+ L +++
Sbjct: 243 QEMQNRGIEPNSITYSTIISIWGKV-GKLDRAAMLFQKLR----SSGVDIDQVLYQTMIV 297
Query: 714 TFVRGGFFARANEVV 728
+ R G A A ++
Sbjct: 298 AYERAGLVAHAKRLL 312
>gi|147798989|emb|CAN61637.1| hypothetical protein VITISV_008458 [Vitis vinifera]
Length = 708
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/232 (20%), Positives = 89/232 (38%), Gaps = 39/232 (16%)
Query: 448 QPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQA 507
+P Y ++ + + K L + +++ L V + + + C +G +A
Sbjct: 362 KPNVHTYTAMINGYCKEDKLNRAEMLLSRMQEQGL-VPNTNTYTTLIDGHC-KVGNFVRA 419
Query: 508 HDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQS 567
++L+D M G + Y +++ + E LL G+Q D Y L+
Sbjct: 420 YELMDLMGKEGFSPNIYTYNAIIDGLCKKGSLDEAYRLLNKVSVHGLQADGVTYTILMSV 479
Query: 568 KIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRID 627
Q DT +L F +M +K G D
Sbjct: 480 HCRQADTNRSLVFFNKM-----------------------------------LKVGFTPD 504
Query: 628 CGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIG 679
+H + +I FC+++ M+++E+ + SLG +P +T+ SM+ GY G
Sbjct: 505 --IHSYTTLISXFCRQKQMKESERLFEEAVSLGLIPTKKTYTSMICGYCRYG 554
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 54/273 (19%), Positives = 107/273 (39%), Gaps = 42/273 (15%)
Query: 457 LVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQAHDLLDEMHL 516
+V F E GK KE + +++ + + L S L V+ + + +G ++ A ++ EM
Sbjct: 160 MVMNFAENGKLKEAVNMVVEMQNQGLVXS--TQTLNCVLDVAVGMGLVEIAENMFVEMCQ 217
Query: 517 AGVRASSSVYASLLKAYIEANRPREVT---------ALLRDARSAGIQLDASC------- 560
GV + ++ A R E + D + + +DA C
Sbjct: 218 RGVSPDCVSFKLMVVACCNMGRVLEAEKWLNAMVERGFIVDNATCTLIIDAFCQKGYVNR 277
Query: 561 -------------------YEALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLV 601
+ AL+ Q A L +EM + + ++
Sbjct: 278 VVGYFWKMVEMGLAPNVINFTALINGLCKQGSIKQAFELLEEMVRRGWKPNVYTHTTLID 337
Query: 602 KGCAQNHEAGLMAKLLQEVK-EGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLG 660
C + L+ V+ +G + + VH + +I+ +CK+ + AE L RM+ G
Sbjct: 338 GLCKKGWTEKAFRLFLKLVRSDGYKPN--VHTYTAMINGYCKEDKLNRAEMLLSRMQEQG 395
Query: 661 HLPNAQTFHSMVTGYAAIGG--KYTEVTELWGE 691
+PN T+ +++ G+ +G + E+ +L G+
Sbjct: 396 LVPNTNTYTTLIDGHCKVGNFVRAYELMDLMGK 428
>gi|26452823|dbj|BAC43491.1| putative salt-inducible protein [Arabidopsis thaliana]
Length = 702
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/241 (21%), Positives = 102/241 (42%), Gaps = 7/241 (2%)
Query: 448 QPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQA 507
+P ++ A+ AG +A E ++ D +I + G D
Sbjct: 242 EPDNVTMAAMIDAYGRAGNVDMALSLYDRARTEKWRI--DAVTFSTLIRIYGVSGNYDGC 299
Query: 508 HDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQS 567
++ +EM GV+ + +Y L+ + A RP + + +D + G + S Y AL+++
Sbjct: 300 LNIYEEMKALGVKPNLVIYNRLIDSMGRAKRPWQAKIIYKDLITNGFTPNWSTYAALVRA 359
Query: 568 KIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEGQRID 627
+ AL +++EMKE + + + L+ CA ++ Q++K + D
Sbjct: 360 YGRARYGDDALAIYREMKEKGLSLTVIL-YNTLLSMCADIGYVDEAFEIFQDMKNCETCD 418
Query: 628 CGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTE 687
++++I + + +AE AL +MR G P S++ Y GK +V +
Sbjct: 419 PDSWTFSSLITVYACSGRVSEAEAALLQMREAGFEPTLFVLTSVIQCY----GKAKQVDD 474
Query: 688 L 688
+
Sbjct: 475 V 475
>gi|410110129|gb|AFV61144.1| pentatricopeptide repeat-containing protein 123, partial [Lippia
pusilla]
Length = 381
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/255 (20%), Positives = 116/255 (45%), Gaps = 25/255 (9%)
Query: 447 LQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQ---VSHDDAALGHVITLCISLGW 503
++P Y L++ + +A E H +++N++ V+++ + + TL
Sbjct: 141 IEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTL-----E 195
Query: 504 LDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEA 563
++A++L+ EM G+ +S Y++++ + + + L + RS G+++D +
Sbjct: 196 HEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSTGVEID----QI 251
Query: 564 LLQSKIVQKDTPG----ALHLFKEMKE-SKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQ 618
L Q+ IV + G A L E+K IPR ++ G + EA + + Q
Sbjct: 252 LFQTMIVXYERAGLIAHAKRLLHELKRPDNIPRDTAIH---ILAGAGRIEEATYVFR--Q 306
Query: 619 EVKEGQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAI 678
+ G+ D V + +IH K + + + +MR LG+ P++ ++ Y +
Sbjct: 307 AIDAGEVKDITV--FERMIHLLSKYKKYANVVEVFDKMRGLGYFPDSNVIAVVLNAYGKL 364
Query: 679 GGKYTEVTELWGEMK 693
++ + +++ EM+
Sbjct: 365 -QEFDKANDVYMEMQ 378
Score = 47.0 bits (110), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 55/278 (19%), Positives = 115/278 (41%), Gaps = 38/278 (13%)
Query: 484 VSHDDAALGHVITLCISLGWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVT 543
V D ++I L L +A + + +G Y +++ + +A RE
Sbjct: 1 VPGDLVLYSNLIELSRKLCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREAR 60
Query: 544 ALLRDARSAGIQLDASCYEALLQSKIVQKDTPGALHLFKEMKESK--------------- 588
+L+ + ++AG+ + + Y LL + K AL +F EM+E K
Sbjct: 61 SLISEMKTAGVMPNTTSYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVY 120
Query: 589 ----IPRSGHQEFEMLVK-GCAQN-----------HEAGLMAKLLQEVKEGQR--IDCGV 630
+ + + F + K G N +A L + + + QR I+ V
Sbjct: 121 GQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNV 180
Query: 631 HDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYTEVTELWG 690
+N+++ + K + A ++ M+S G PN+ T+ ++++ + + GK L+
Sbjct: 181 VTYNSMMMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKV-GKLDRAAMLFQ 239
Query: 691 EMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVV 728
+++ ST + D+ L +++ + R G A A ++
Sbjct: 240 KLR----STGVEIDQILFQTMIVXYERAGLIAHAKRLL 273
>gi|224160730|ref|XP_002338246.1| predicted protein [Populus trichocarpa]
gi|222871516|gb|EEF08647.1| predicted protein [Populus trichocarpa]
Length = 235
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 99/224 (44%), Gaps = 21/224 (9%)
Query: 504 LDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEA 563
+D+A LL EM + + Y++L++ + RP+E L ++ S G+ + Y
Sbjct: 26 MDEAKSLLAEMSEKELTPDTVTYSTLMQGLCQVGRPQEALNLFKEMCSTGLLPNLVTYSI 85
Query: 564 LLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVKEG 623
LL AL L + M+E K+ E + A+ L +KL +
Sbjct: 86 LLDGFWKHGHLDEALKLLQSMQEKKL--------EPDILEVAKE----LFSKLFVD---- 129
Query: 624 QRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKYT 683
I VH ++ +I K+RL +A + ++M G +P++ +++ ++ G+ I T
Sbjct: 130 -GIRPTVHTYSVMIKGLLKERLSDEAYRLFRKMEDDGFMPDSCSYNVIIQGFLQIRDSST 188
Query: 684 EV---TELWGEMKSFASST-SMNFDEELLDSVLYTFVRGGFFAR 723
V E+ G+ S S+T M D E D ++ F+ G R
Sbjct: 189 AVRLIDEMVGKGFSADSTTFQMLLDLESDDEIISRFMSGSSRGR 232
Score = 40.4 bits (93), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 55/114 (48%), Gaps = 7/114 (6%)
Query: 625 RIDCG--VHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGGKY 682
R CG VH +N +I+ +C+ R+M +A+ L M P+ T+ +++ G + G+
Sbjct: 3 RKGCGPVVHSYNILINGYCQSRMMDEAKSLLAEMSEKELTPDTVTYSTLMQGLCQV-GRP 61
Query: 683 TEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKM 736
E L+ EM S ++ LLD F + G A +++ M+E K+
Sbjct: 62 QEALNLFKEMCSTGLLPNLVTYSILLDG----FWKHGHLDEALKLLQSMQEKKL 111
>gi|297721877|ref|NP_001173302.1| Os03g0201300 [Oryza sativa Japonica Group]
gi|108706707|gb|ABF94502.1| salt-inducible protein, putative, expressed [Oryza sativa Japonica
Group]
gi|255674288|dbj|BAH92030.1| Os03g0201300 [Oryza sativa Japonica Group]
Length = 796
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/255 (20%), Positives = 103/255 (40%), Gaps = 14/255 (5%)
Query: 502 GWLDQAHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCY 561
G L +A LL M G+ + Y +L+ A+ ++ T ++ + G + D Y
Sbjct: 257 GMLGEARALLARMKRDGIAPTQPTYNTLVSAFARLGWIKQATKVVESMTAYGFEPDLRTY 316
Query: 562 EALLQSKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKGCAQNHEAGLMAKLLQEVK 621
L A L EM+ + LV C + + +LL+E++
Sbjct: 317 NVLAVGLCQAGKVDEAFRLKDEMERLSTALPDVVTYNTLVDACFKWRCSSDALRLLEEMR 376
Query: 622 E-GQRIDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIGG 680
+ G + H N V+ CK+ +++A L+++ G P+ T+++++ Y G
Sbjct: 377 DKGVKPTLVTH--NIVVKSLCKEGKLEEALGKLEKIAEEGLAPDVITYNTLIDAYCKAGN 434
Query: 681 ---KYTEVTELWGEMKSFASSTSMNFDEELLDSVLYTFVRGGFFARANEVVAMMEEGKMF 737
+T + E+ G+ + D L++VLY + + A E++ +
Sbjct: 435 VAKAFTLMDEMVGK--------GLKMDTFTLNTVLYNLCKMKRYEDAEELLHSPPQRGFV 486
Query: 738 IDKYKYRTLFLKYHK 752
D+ Y T+ Y K
Sbjct: 487 PDEVSYGTVMAAYFK 501
Score = 45.8 bits (107), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 58/248 (23%), Positives = 108/248 (43%), Gaps = 8/248 (3%)
Query: 447 LQPTEKIYIKLVKAFLEAGKTKELTHFLIKAEKENLQVSHDDAALGHVITLCISLGWLDQ 506
++PT + +VK+ + GK +E L K +E L + D +I G + +
Sbjct: 380 VKPTLVTHNIVVKSLCKEGKLEEALGKLEKIAEEGL--APDVITYNTLIDAYCKAGNVAK 437
Query: 507 AHDLLDEMHLAGVRASSSVYASLLKAYIEANRPREVTALLRDARSAGIQLDASCYEALLQ 566
A L+DEM G++ + ++L + R + LL G D Y ++
Sbjct: 438 AFTLMDEMVGKGLKMDTFTLNTVLYNLCKMKRYEDAEELLHSPPQRGFVPDEVSYGTVMA 497
Query: 567 SKIVQKDTPGALHLFKEMKESKIPRSGHQEFEMLVKG-CAQNHEAGLMAKLLQEVKEGQR 625
+ + + AL L+ +M E K+ S + L+KG C + KL + V++G
Sbjct: 498 AYFKEYNPEPALRLWDQMIERKLIPS-ISTYNTLIKGLCRMERLKEAIDKLNELVEKGLV 556
Query: 626 IDCGVHDWNNVIHFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIG--GKYT 683
D +N +IH +CK+ +++A + +M P+ T ++++ G G K
Sbjct: 557 PDETT--YNIIIHAYCKEGDLENAFRFHNKMVENSFKPDVVTCNTLMNGLCLHGKLDKAL 614
Query: 684 EVTELWGE 691
++ E W E
Sbjct: 615 KLFESWVE 622
Score = 41.2 bits (95), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 73/162 (45%), Gaps = 7/162 (4%)
Query: 522 SSSVYASLLKAYIEANRPREVTALLRD-ARSAGIQLDASCYEALLQSKIVQKDT-PGA-L 578
+S + + L AY P LL R G++ A+L + T P A L
Sbjct: 134 TSPLADAALSAYARLRLPHLAAQLLHSLRRRRGVRPSLQAANAVLSALSRSPSTLPQASL 193
Query: 579 HLFKEMKESKIPRSGHQEFEMLVKG-CAQNHEAGLMAKLLQEVKEGQRIDCGVHDWNNVI 637
+F+ + E ++ H F +LV C++ A +A L +G + +N ++
Sbjct: 194 DVFRSLIELRL-HPNHYTFNLLVHTHCSKGTLADALATL--STMQGFGLSPDAVTYNTLL 250
Query: 638 HFFCKKRLMQDAEKALKRMRSLGHLPNAQTFHSMVTGYAAIG 679
+ C+K ++ +A L RM+ G P T++++V+ +A +G
Sbjct: 251 NAHCRKGMLGEARALLARMKRDGIAPTQPTYNTLVSAFARLG 292
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.320 0.134 0.393
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,755,583,390
Number of Sequences: 23463169
Number of extensions: 473240306
Number of successful extensions: 1218946
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 1001
Number of HSP's successfully gapped in prelim test: 3020
Number of HSP's that attempted gapping in prelim test: 1188603
Number of HSP's gapped (non-prelim): 23623
length of query: 784
length of database: 8,064,228,071
effective HSP length: 151
effective length of query: 633
effective length of database: 8,816,256,848
effective search space: 5580690584784
effective search space used: 5580690584784
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 81 (35.8 bits)