Query 003947
Match_columns 784
No_of_seqs 374 out of 3517
Neff 6.9
Searched_HMMs 46136
Date Thu Mar 28 14:49:13 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/003947.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/003947hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN00142 sucrose synthase 100.0 6E-196 1E-200 1701.5 71.5 783 1-784 13-810 (815)
2 TIGR02470 sucr_synth sucrose s 100.0 1E-191 2E-196 1666.4 75.0 768 13-781 5-784 (784)
3 PF00862 Sucrose_synth: Sucros 100.0 6E-167 1E-171 1355.5 31.7 531 1-532 6-550 (550)
4 KOG0853 Glycosyltransferase [C 100.0 3.8E-60 8.3E-65 525.9 24.6 494 171-772 1-495 (495)
5 TIGR02468 sucrsPsyn_pln sucros 100.0 1.8E-58 4E-63 551.2 40.0 456 254-745 169-671 (1050)
6 TIGR02472 sucr_P_syn_N sucrose 100.0 2.1E-51 4.6E-56 467.1 40.2 426 255-742 1-438 (439)
7 PRK00654 glgA glycogen synthas 100.0 3E-43 6.5E-48 403.2 37.4 427 255-744 1-462 (466)
8 TIGR03449 mycothiol_MshA UDP-N 100.0 3.1E-43 6.8E-48 394.2 36.6 399 257-744 1-401 (405)
9 TIGR02095 glgA glycogen/starch 100.0 1.6E-41 3.4E-46 389.6 38.7 435 255-744 1-472 (473)
10 PLN02939 transferase, transfer 100.0 7.5E-41 1.6E-45 394.9 44.6 458 232-744 455-966 (977)
11 cd03800 GT1_Sucrose_synthase T 100.0 4.3E-41 9.3E-46 373.0 39.0 397 256-739 1-397 (398)
12 PLN02316 synthase/transferase 100.0 1.8E-40 4E-45 398.2 40.7 406 254-744 587-1033(1036)
13 PRK10307 putative glycosyl tra 100.0 1.9E-40 4.1E-45 373.5 37.4 396 255-744 1-407 (412)
14 PRK14098 glycogen synthase; Pr 100.0 1.9E-40 4.1E-45 381.3 36.6 439 252-744 4-485 (489)
15 cd03796 GT1_PIG-A_like This fa 100.0 2.6E-40 5.6E-45 371.0 36.6 365 256-744 1-367 (398)
16 cd03791 GT1_Glycogen_synthase_ 100.0 6.1E-40 1.3E-44 376.1 38.0 434 256-743 1-475 (476)
17 PRK14099 glycogen synthase; Pr 100.0 2.9E-39 6.4E-44 371.1 39.7 435 254-744 3-478 (485)
18 TIGR02149 glgA_Coryne glycogen 100.0 4.6E-39 1E-43 357.4 37.2 378 255-744 1-386 (388)
19 PRK15427 colanic acid biosynth 100.0 5.4E-39 1.2E-43 361.8 36.8 281 381-744 116-405 (406)
20 cd04962 GT1_like_5 This family 100.0 2.7E-38 5.9E-43 348.0 38.3 366 255-744 1-370 (371)
21 PRK15484 lipopolysaccharide 1, 100.0 4.6E-38 1E-42 351.3 37.7 374 253-744 1-377 (380)
22 PLN02871 UDP-sulfoquinovose:DA 100.0 3.8E-38 8.1E-43 361.0 36.4 378 253-749 57-440 (465)
23 cd03818 GT1_ExpC_like This fam 100.0 3.1E-37 6.7E-42 345.8 37.0 364 294-739 15-395 (396)
24 cd03805 GT1_ALG2_like This fam 100.0 7.2E-37 1.6E-41 340.2 34.4 386 255-738 1-392 (392)
25 TIGR03088 stp2 sugar transfera 100.0 1.2E-36 2.6E-41 337.2 35.1 365 256-744 3-372 (374)
26 cd05844 GT1_like_7 Glycosyltra 100.0 3E-36 6.5E-41 331.3 32.5 282 381-741 80-367 (367)
27 PRK15490 Vi polysaccharide bio 100.0 5E-36 1.1E-40 339.6 34.1 400 273-744 169-575 (578)
28 cd04955 GT1_like_6 This family 100.0 2.5E-35 5.3E-40 322.4 38.2 361 256-743 1-363 (363)
29 PRK15179 Vi polysaccharide bio 100.0 1.1E-35 2.5E-40 350.3 37.7 459 178-743 203-692 (694)
30 cd03819 GT1_WavL_like This fam 100.0 1.1E-35 2.4E-40 324.5 33.0 347 276-734 8-355 (355)
31 KOG1111 N-acetylglucosaminyltr 100.0 2.1E-36 4.6E-41 317.6 25.5 364 255-744 1-366 (426)
32 cd03792 GT1_Trehalose_phosphor 100.0 3.7E-35 8.1E-40 325.9 35.8 287 381-744 83-371 (372)
33 cd03821 GT1_Bme6_like This fam 100.0 6.2E-35 1.4E-39 315.9 35.7 372 256-739 1-374 (375)
34 cd03799 GT1_amsK_like This is 100.0 8E-34 1.7E-38 309.1 35.2 272 381-738 77-355 (355)
35 cd03794 GT1_wbuB_like This fam 100.0 1.7E-33 3.7E-38 305.7 36.3 387 256-739 1-394 (394)
36 cd03801 GT1_YqgM_like This fam 100.0 2.9E-33 6.2E-38 300.0 37.3 374 256-743 1-374 (374)
37 cd03813 GT1_like_3 This family 100.0 7.2E-35 1.6E-39 334.8 26.4 293 381-743 171-475 (475)
38 cd03795 GT1_like_4 This family 100.0 1.6E-33 3.5E-38 306.9 35.7 354 256-735 1-357 (357)
39 cd03802 GT1_AviGT4_like This f 100.0 2.4E-33 5.2E-38 303.7 36.2 333 255-743 1-335 (335)
40 cd03814 GT1_like_2 This family 100.0 1.8E-33 3.8E-38 305.3 34.5 363 256-743 1-364 (364)
41 cd04951 GT1_WbdM_like This fam 100.0 2.7E-33 5.8E-38 305.6 36.1 282 381-743 77-359 (360)
42 cd03822 GT1_ecORF704_like This 100.0 6E-33 1.3E-37 301.8 38.4 358 256-743 1-366 (366)
43 cd03807 GT1_WbnK_like This fam 100.0 2.7E-33 5.8E-38 302.0 33.6 363 256-743 1-365 (365)
44 cd03817 GT1_UGDG_like This fam 100.0 1.9E-33 4.2E-38 304.7 32.4 371 256-744 1-373 (374)
45 cd03812 GT1_CapH_like This fam 100.0 1.9E-33 4E-38 307.4 30.9 347 256-727 1-348 (358)
46 cd03825 GT1_wcfI_like This fam 100.0 3.9E-33 8.5E-38 304.9 32.7 343 255-744 1-364 (365)
47 cd03816 GT1_ALG1_like This fam 100.0 9E-33 2E-37 312.2 35.4 388 253-739 2-411 (415)
48 PRK09922 UDP-D-galactose:(gluc 100.0 2.5E-33 5.5E-38 310.2 29.5 269 381-744 82-355 (359)
49 PLN02949 transferase, transfer 100.0 1.7E-32 3.8E-37 312.7 36.2 400 249-744 28-456 (463)
50 PRK10125 putative glycosyl tra 100.0 4E-33 8.6E-38 313.9 29.8 278 381-744 92-404 (405)
51 PLN02846 digalactosyldiacylgly 100.0 1.4E-32 3E-37 310.3 33.2 371 253-744 3-391 (462)
52 cd03820 GT1_amsD_like This fam 100.0 2.8E-32 6E-37 291.6 33.2 345 256-739 1-347 (348)
53 cd03806 GT1_ALG11_like This fa 100.0 1.8E-32 3.8E-37 310.2 33.3 380 257-736 3-418 (419)
54 cd03808 GT1_cap1E_like This fa 100.0 5.8E-32 1.3E-36 290.4 35.1 356 256-739 1-358 (359)
55 cd03809 GT1_mtfB_like This fam 100.0 1.2E-32 2.5E-37 299.5 29.8 364 256-739 1-364 (365)
56 cd03798 GT1_wlbH_like This fam 100.0 2.2E-31 4.7E-36 286.9 36.8 285 381-744 91-376 (377)
57 cd03823 GT1_ExpE7_like This fa 100.0 9.3E-32 2E-36 290.8 33.6 353 256-743 1-358 (359)
58 TIGR03087 stp1 sugar transfera 100.0 1.1E-32 2.3E-37 309.4 25.3 284 381-743 102-395 (397)
59 cd03811 GT1_WabH_like This fam 100.0 2.6E-31 5.7E-36 284.1 32.9 272 382-730 80-352 (353)
60 TIGR02918 accessory Sec system 100.0 4E-31 8.7E-36 304.2 30.9 280 381-744 209-499 (500)
61 cd04946 GT1_AmsK_like This fam 100.0 1.4E-30 3E-35 293.7 30.5 276 381-739 125-406 (407)
62 PLN02275 transferase, transfer 100.0 3.2E-29 7E-34 279.1 31.2 316 295-702 24-369 (371)
63 cd03804 GT1_wbaZ_like This fam 100.0 1.7E-29 3.7E-34 277.6 25.5 264 381-738 81-350 (351)
64 cd04949 GT1_gtfA_like This fam 100.0 4.8E-29 1E-33 275.9 29.0 273 382-738 98-372 (372)
65 COG0297 GlgA Glycogen synthase 100.0 1.6E-28 3.5E-33 277.6 33.0 437 255-745 1-478 (487)
66 PHA01630 putative group 1 glyc 100.0 1.3E-28 2.9E-33 269.9 25.4 258 389-745 52-331 (331)
67 PLN02501 digalactosyldiacylgly 100.0 1.3E-27 2.9E-32 273.4 32.5 275 381-744 432-709 (794)
68 cd03793 GT1_Glycogen_synthase_ 100.0 1.2E-26 2.6E-31 263.4 32.6 335 381-744 146-586 (590)
69 PRK00726 murG undecaprenyldiph 99.9 6.7E-26 1.4E-30 250.4 29.6 343 255-743 2-356 (357)
70 cd03788 GT1_TPS Trehalose-6-Ph 99.9 1E-25 2.2E-30 257.8 25.8 324 370-740 119-457 (460)
71 PHA01633 putative glycosyl tra 99.9 5.4E-25 1.2E-29 240.0 27.3 224 447-739 89-334 (335)
72 cd03785 GT1_MurG MurG is an N- 99.9 1.4E-24 2.9E-29 238.4 29.0 324 276-736 8-349 (350)
73 TIGR01133 murG undecaprenyldip 99.9 2.4E-24 5.2E-29 236.3 28.4 315 294-736 19-346 (348)
74 TIGR02400 trehalose_OtsA alpha 99.9 4.8E-24 1E-28 242.9 29.5 321 368-741 113-453 (456)
75 PRK05749 3-deoxy-D-manno-octul 99.9 4.7E-23 1E-27 233.5 28.4 285 382-743 123-418 (425)
76 PRK13609 diacylglycerol glucos 99.9 8.2E-23 1.8E-27 227.9 25.0 264 381-744 102-371 (380)
77 PLN03063 alpha,alpha-trehalose 99.9 5.9E-22 1.3E-26 238.9 28.0 327 367-744 132-477 (797)
78 PF00534 Glycos_transf_1: Glyc 99.9 5.5E-23 1.2E-27 202.9 15.3 160 545-724 12-172 (172)
79 cd04950 GT1_like_1 Glycosyltra 99.9 6.8E-21 1.5E-25 212.4 31.2 266 381-743 100-370 (373)
80 PLN02605 monogalactosyldiacylg 99.9 1E-20 2.2E-25 211.8 26.6 265 381-743 98-380 (382)
81 PRK14501 putative bifunctional 99.9 5.7E-21 1.2E-25 230.1 25.8 324 368-744 119-462 (726)
82 cd01635 Glycosyltransferase_GT 99.9 7.9E-20 1.7E-24 185.1 24.6 121 553-688 109-229 (229)
83 TIGR02094 more_P_ylases alpha- 99.8 3.6E-19 7.8E-24 208.0 29.1 342 378-742 156-598 (601)
84 COG0438 RfaG Glycosyltransfera 99.8 1E-18 2.3E-23 184.4 27.4 291 384-745 84-377 (381)
85 PRK13608 diacylglycerol glucos 99.8 6.1E-19 1.3E-23 198.1 25.8 263 381-743 102-370 (391)
86 TIGR02398 gluc_glyc_Psyn gluco 99.8 9.6E-18 2.1E-22 191.0 29.7 325 371-741 121-479 (487)
87 TIGR00236 wecB UDP-N-acetylglu 99.8 4.8E-18 1E-22 188.7 20.7 276 381-740 84-363 (365)
88 PRK09814 beta-1,6-galactofuran 99.8 2E-17 4.2E-22 182.0 23.9 246 382-737 62-324 (333)
89 PRK00025 lpxB lipid-A-disaccha 99.8 4.6E-17 1E-21 181.4 25.2 250 381-725 83-356 (380)
90 KOG1387 Glycosyltransferase [C 99.8 6.6E-16 1.4E-20 162.4 28.9 389 255-743 44-457 (465)
91 PLN03064 alpha,alpha-trehalose 99.7 3.9E-16 8.4E-21 188.2 28.5 325 369-743 218-560 (934)
92 cd03786 GT1_UDP-GlcNAc_2-Epime 99.7 1.1E-16 2.4E-21 176.8 20.7 251 382-717 87-344 (363)
93 cd04299 GT1_Glycogen_Phosphory 99.7 1E-15 2.2E-20 182.1 29.0 343 378-743 243-688 (778)
94 TIGR03713 acc_sec_asp1 accesso 99.7 1.6E-14 3.4E-19 167.2 26.0 169 548-741 319-518 (519)
95 PF05693 Glycogen_syn: Glycoge 99.6 3.8E-14 8.3E-19 161.0 22.5 329 382-744 142-581 (633)
96 PF13692 Glyco_trans_1_4: Glyc 99.6 1.2E-14 2.6E-19 137.6 10.4 130 548-704 2-133 (135)
97 KOG2941 Beta-1,4-mannosyltrans 99.5 5.3E-12 1.1E-16 133.5 25.8 386 297-740 34-437 (444)
98 TIGR00215 lpxB lipid-A-disacch 99.5 3.8E-12 8.3E-17 142.9 25.0 249 381-723 87-364 (385)
99 PF00982 Glyco_transf_20: Glyc 99.4 9.3E-12 2E-16 142.4 21.4 323 368-742 127-472 (474)
100 PRK10117 trehalose-6-phosphate 99.4 6.8E-11 1.5E-15 134.1 24.7 323 371-743 112-452 (474)
101 PF13524 Glyco_trans_1_2: Glyc 99.4 3.4E-12 7.5E-17 113.6 10.5 92 643-740 1-92 (92)
102 PLN02205 alpha,alpha-trehalose 99.3 2.6E-10 5.7E-15 138.6 25.5 331 367-743 185-550 (854)
103 COG0380 OtsA Trehalose-6-phosp 99.3 1.2E-09 2.5E-14 123.7 25.2 330 367-742 132-477 (486)
104 PRK12446 undecaprenyldiphospho 99.2 4.5E-09 9.8E-14 116.8 28.5 323 276-741 10-348 (352)
105 COG0707 MurG UDP-N-acetylgluco 99.2 2.3E-08 5.1E-13 110.8 33.3 252 381-739 89-352 (357)
106 PF13579 Glyco_trans_4_4: Glyc 99.2 1.5E-11 3.2E-16 118.0 6.9 160 278-503 1-160 (160)
107 PF13439 Glyco_transf_4: Glyco 99.2 6E-11 1.3E-15 115.7 11.3 168 275-510 9-177 (177)
108 TIGR02919 accessory Sec system 99.1 5.2E-09 1.1E-13 119.0 23.5 143 548-724 282-425 (438)
109 cd03784 GT1_Gtf_like This fami 99.0 2.1E-07 4.5E-12 104.7 26.4 135 545-720 237-381 (401)
110 PF13528 Glyco_trans_1_3: Glyc 98.9 2.4E-07 5.1E-12 100.8 21.6 116 546-701 191-315 (318)
111 PF08323 Glyco_transf_5: Starc 98.9 7.2E-09 1.6E-13 109.4 9.2 184 256-466 1-231 (245)
112 TIGR01426 MGT glycosyltransfer 98.8 2.8E-06 6.1E-11 95.5 29.6 111 614-741 273-389 (392)
113 PF09314 DUF1972: Domain of un 98.8 8.5E-08 1.8E-12 96.3 13.9 177 254-505 1-185 (185)
114 TIGR03492 conserved hypothetic 98.8 1.6E-06 3.5E-11 98.0 25.3 272 381-740 91-394 (396)
115 TIGR03568 NeuC_NnaA UDP-N-acet 98.6 5.6E-06 1.2E-10 92.6 23.9 267 381-741 91-364 (365)
116 PF13477 Glyco_trans_4_2: Glyc 98.6 8.1E-07 1.8E-11 84.5 12.6 123 294-458 15-139 (139)
117 TIGR03590 PseG pseudaminic aci 98.4 2.6E-05 5.7E-10 84.0 20.7 97 548-672 171-268 (279)
118 COG1519 KdtA 3-deoxy-D-manno-o 98.4 0.00031 6.8E-09 78.1 28.2 266 381-728 121-404 (419)
119 PF13844 Glyco_transf_41: Glyc 98.3 1.7E-05 3.8E-10 90.2 17.1 185 534-744 273-466 (468)
120 TIGR00661 MJ1255 conserved hyp 98.3 7.1E-05 1.5E-09 82.1 21.0 69 615-693 228-302 (321)
121 PHA03392 egt ecdysteroid UDP-g 98.3 0.00062 1.3E-08 79.5 29.3 139 548-724 297-446 (507)
122 PF02350 Epimerase_2: UDP-N-ac 98.2 8.1E-05 1.8E-09 82.7 19.8 270 383-741 67-344 (346)
123 KOG3742 Glycogen synthase [Car 98.2 9.9E-06 2.2E-10 88.8 11.9 105 635-741 496-609 (692)
124 PF04007 DUF354: Protein of un 98.0 0.001 2.2E-08 73.4 22.8 61 634-702 243-306 (335)
125 COG1819 Glycosyl transferases, 98.0 0.00036 7.9E-09 79.2 19.8 159 546-743 236-400 (406)
126 PF02684 LpxB: Lipid-A-disacch 98.0 0.0014 3.1E-08 73.3 23.4 199 381-670 80-285 (373)
127 PLN02448 UDP-glycosyltransfera 97.8 0.013 2.9E-07 67.7 29.4 143 547-723 274-429 (459)
128 COG0763 LpxB Lipid A disacchar 97.7 0.0019 4.2E-08 71.2 19.1 199 381-670 83-289 (381)
129 cd04300 GT1_Glycogen_Phosphory 97.6 0.0012 2.7E-08 79.4 15.9 151 538-697 520-688 (797)
130 COG3914 Spy Predicted O-linked 97.6 0.0015 3.3E-08 74.8 15.6 181 538-744 422-613 (620)
131 PRK01021 lpxB lipid-A-disaccha 97.4 0.021 4.5E-07 67.2 22.5 197 381-670 308-513 (608)
132 COG4641 Uncharacterized protei 97.4 0.01 2.2E-07 65.3 18.5 118 615-743 236-360 (373)
133 PRK14986 glycogen phosphorylas 97.4 0.0026 5.6E-08 76.7 15.1 152 538-698 533-702 (815)
134 COG0381 WecB UDP-N-acetylgluco 97.4 0.079 1.7E-06 58.9 25.1 275 381-744 90-370 (383)
135 PRK14985 maltodextrin phosphor 97.3 0.0021 4.5E-08 77.2 13.6 145 538-690 519-681 (798)
136 COG0058 GlgP Glucan phosphoryl 97.3 0.0046 1E-07 73.7 15.9 143 540-690 479-630 (750)
137 PRK10017 colanic acid biosynth 97.1 0.4 8.7E-06 55.0 28.8 96 606-716 297-398 (426)
138 PLN02863 UDP-glucoronosyl/UDP- 97.0 1.1 2.3E-05 52.3 31.2 117 617-746 344-473 (477)
139 PLN02208 glycosyltransferase f 96.9 1.2 2.5E-05 51.5 30.7 156 546-724 250-416 (442)
140 PF12000 Glyco_trans_4_3: Gkyc 96.9 0.0054 1.2E-07 61.2 9.9 108 373-509 57-170 (171)
141 PLN00414 glycosyltransferase f 96.9 1.3 2.9E-05 51.0 31.5 156 546-724 251-417 (446)
142 TIGR02093 P_ylase glycogen/sta 96.8 0.0087 1.9E-07 72.1 12.3 152 538-698 517-686 (794)
143 PLN02562 UDP-glycosyltransfera 96.8 1.5 3.4E-05 50.6 31.2 88 615-716 327-419 (448)
144 PLN02554 UDP-glycosyltransfera 96.7 1.8 4E-05 50.4 30.4 87 616-715 342-446 (481)
145 PRK02797 4-alpha-L-fucosyltran 96.7 0.25 5.4E-06 53.6 20.9 169 548-744 145-316 (322)
146 PLN02410 UDP-glucoronosyl/UDP- 96.7 1.8 3.9E-05 50.1 29.7 93 616-723 324-422 (451)
147 PLN02210 UDP-glucosyl transfer 96.5 2.3 5E-05 49.3 33.0 133 547-704 269-413 (456)
148 PRK14089 ipid-A-disaccharide s 96.4 0.081 1.7E-06 58.9 16.0 91 548-670 168-260 (347)
149 KOG1050 Trehalose-6-phosphate 96.3 0.28 6.1E-06 59.4 20.8 302 362-705 120-439 (732)
150 PF00343 Phosphorylase: Carboh 96.3 0.23 5.1E-06 59.5 19.6 144 539-690 435-596 (713)
151 PLN02173 UDP-glucosyl transfer 96.2 3.3 7.2E-05 47.9 30.5 94 615-723 316-420 (449)
152 PLN03007 UDP-glucosyltransfera 96.1 4 8.7E-05 47.6 33.4 45 616-672 345-391 (482)
153 COG3980 spsG Spore coat polysa 96.0 0.23 5E-06 52.9 15.7 139 547-721 158-304 (318)
154 PF07429 Glyco_transf_56: 4-al 96.0 0.41 9E-06 52.6 17.8 123 547-682 183-308 (360)
155 PLN02555 limonoid glucosyltran 95.9 5.1 0.00011 46.8 29.0 95 615-724 336-442 (480)
156 PF08288 PIGA: PIGA (GPI ancho 95.8 0.053 1.1E-06 47.7 8.1 72 335-417 13-86 (90)
157 PLN02670 transferase, transfer 95.6 6.4 0.00014 45.9 31.3 107 627-744 346-465 (472)
158 COG1817 Uncharacterized protei 95.4 1.6 3.4E-05 47.4 19.1 48 652-701 259-309 (346)
159 PF06258 Mito_fiss_Elm1: Mitoc 95.4 1.5 3.2E-05 48.2 19.6 109 546-674 145-259 (311)
160 COG4671 Predicted glycosyl tra 95.0 5.1 0.00011 44.3 21.6 106 547-677 219-327 (400)
161 PF11440 AGT: DNA alpha-glucos 94.7 1.5 3.2E-05 46.8 16.3 138 552-703 187-350 (355)
162 PLN02992 coniferyl-alcohol glu 94.6 12 0.00025 43.8 26.8 78 617-704 339-425 (481)
163 PF04464 Glyphos_transf: CDP-G 94.4 0.51 1.1E-05 52.7 13.2 133 538-704 184-334 (369)
164 COG3660 Predicted nucleoside-d 91.2 13 0.00027 39.8 16.7 113 545-675 159-276 (329)
165 PF05159 Capsule_synth: Capsul 90.9 20 0.00043 38.2 18.9 103 545-670 114-224 (269)
166 PF04101 Glyco_tran_28_C: Glyc 90.8 0.086 1.9E-06 51.9 0.7 91 616-721 55-155 (167)
167 PF00201 UDPGT: UDP-glucoronos 89.7 0.93 2E-05 52.7 8.1 136 546-718 275-417 (500)
168 cd03789 GT1_LPS_heptosyltransf 88.6 3 6.5E-05 44.6 10.4 98 550-670 124-223 (279)
169 PLN02764 glycosyltransferase f 87.2 65 0.0014 37.4 33.3 154 546-722 256-420 (453)
170 PRK10422 lipopolysaccharide co 86.9 5.9 0.00013 44.0 11.9 103 547-670 183-287 (352)
171 PLN03015 UDP-glucosyl transfer 86.0 76 0.0016 37.0 31.0 72 627-704 342-424 (470)
172 TIGR02195 heptsyl_trn_II lipop 85.7 8.2 0.00018 42.4 12.1 100 547-670 173-276 (334)
173 PF01075 Glyco_transf_9: Glyco 85.4 8.9 0.00019 39.9 11.7 103 546-670 104-208 (247)
174 PRK05562 precorrin-2 dehydroge 82.3 56 0.0012 34.2 15.7 139 564-728 35-180 (223)
175 TIGR03609 S_layer_CsaB polysac 81.6 63 0.0014 34.8 16.7 86 563-670 190-275 (298)
176 PF10087 DUF2325: Uncharacteri 81.3 2.6 5.7E-05 37.9 4.8 84 582-679 2-90 (97)
177 PF12038 DUF3524: Domain of un 81.3 4.3 9.3E-05 40.3 6.6 80 381-468 57-137 (168)
178 PF03401 TctC: Tripartite tric 80.7 23 0.0005 38.1 12.7 150 549-722 79-244 (274)
179 KOG4626 O-linked N-acetylgluco 80.6 18 0.00039 42.8 12.1 197 537-760 750-954 (966)
180 PLN03004 UDP-glycosyltransfera 80.5 32 0.0007 39.9 14.5 83 617-715 335-429 (451)
181 PLN02167 UDP-glycosyltransfera 80.2 73 0.0016 37.1 17.6 72 627-704 347-432 (475)
182 TIGR02201 heptsyl_trn_III lipo 80.0 15 0.00033 40.5 11.4 102 548-670 182-285 (344)
183 COG0859 RfaF ADP-heptose:LPS h 78.5 19 0.00041 39.8 11.5 98 548-670 176-276 (334)
184 TIGR02193 heptsyl_trn_I lipopo 78.1 25 0.00055 38.2 12.3 99 547-670 179-279 (319)
185 PF10933 DUF2827: Protein of u 75.4 32 0.00068 38.4 11.7 166 539-730 180-349 (364)
186 KOG0853 Glycosyltransferase [C 75.0 7.7 0.00017 45.1 7.3 100 445-578 204-303 (495)
187 PLN00164 glucosyltransferase; 72.7 75 0.0016 37.2 14.9 87 627-723 346-445 (480)
188 PRK10964 ADP-heptose:LPS hepto 70.3 37 0.0008 37.1 11.1 97 549-670 180-278 (322)
189 PLN02152 indole-3-acetate beta 70.3 92 0.002 36.2 14.7 80 615-704 326-415 (455)
190 PRK10916 ADP-heptose:LPS hepto 70.2 36 0.00078 37.7 11.1 100 548-670 181-286 (348)
191 PF06925 MGDG_synth: Monogalac 69.3 29 0.00062 34.3 9.1 60 381-464 87-151 (169)
192 PF01975 SurE: Survival protei 68.5 41 0.00089 34.5 10.2 38 255-318 1-38 (196)
193 PF03033 Glyco_transf_28: Glyc 68.3 3.6 7.7E-05 38.7 2.3 111 277-415 8-130 (139)
194 PF03016 Exostosin: Exostosin 66.9 13 0.00028 39.9 6.6 70 630-700 227-299 (302)
195 COG1618 Predicted nucleotide k 65.2 1.5E+02 0.0032 29.8 12.7 37 250-307 1-37 (179)
196 PF11997 DUF3492: Domain of un 64.8 11 0.00023 40.7 5.3 81 382-462 171-257 (268)
197 PF04413 Glycos_transf_N: 3-De 63.5 33 0.00072 34.7 8.4 69 383-464 95-163 (186)
198 COG2327 WcaK Polysaccharide py 62.3 2.8E+02 0.0061 31.5 28.4 88 616-716 266-357 (385)
199 PF08660 Alg14: Oligosaccharid 61.5 19 0.0004 36.0 6.0 64 381-463 90-159 (170)
200 PLN02534 UDP-glycosyltransfera 61.3 3.3E+02 0.0071 32.0 32.2 44 617-672 345-390 (491)
201 TIGR01470 cysG_Nterm siroheme 60.8 2E+02 0.0044 29.5 16.4 172 566-764 21-201 (205)
202 COG2910 Putative NADH-flavin r 59.4 8.3 0.00018 39.1 3.0 33 255-316 1-33 (211)
203 KOG1192 UDP-glucuronosyl and U 58.5 1.7E+02 0.0037 33.8 14.3 143 547-722 277-434 (496)
204 PRK04020 rps2P 30S ribosomal p 55.3 88 0.0019 32.3 9.8 111 560-692 49-161 (204)
205 PLN02207 UDP-glycosyltransfera 55.0 4E+02 0.0088 31.1 21.6 79 616-704 332-424 (468)
206 PF05686 Glyco_transf_90: Glyc 54.2 46 0.00099 37.9 8.3 82 661-746 234-319 (395)
207 KOG1021 Acetylglucosaminyltran 53.5 1.1E+02 0.0024 35.6 11.6 96 631-732 335-433 (464)
208 PRK00676 hemA glutamyl-tRNA re 52.7 3.7E+02 0.008 30.1 14.8 125 578-725 173-305 (338)
209 PRK13932 stationary phase surv 51.4 2.7E+02 0.0058 29.9 13.0 39 252-317 3-41 (257)
210 COG1647 Esterase/lipase [Gener 48.8 66 0.0014 33.7 7.6 43 371-415 74-116 (243)
211 smart00672 CAP10 Putative lipo 48.7 74 0.0016 34.0 8.4 48 695-746 203-250 (256)
212 PF09752 DUF2048: Uncharacteri 47.8 2.1E+02 0.0045 32.1 11.7 34 381-414 172-205 (348)
213 PRK02122 glucosamine-6-phospha 46.6 45 0.00098 40.5 7.1 106 184-316 291-408 (652)
214 TIGR00715 precor6x_red precorr 45.6 74 0.0016 34.0 7.8 100 547-674 129-233 (256)
215 PF04230 PS_pyruv_trans: Polys 44.7 3.5E+02 0.0077 27.5 16.4 95 560-672 189-284 (286)
216 PF15024 Glyco_transf_18: Glyc 44.2 2.5E+02 0.0054 33.4 12.2 153 548-744 277-455 (559)
217 TIGR00087 surE 5'/3'-nucleotid 43.9 3.9E+02 0.0084 28.4 12.8 34 381-414 84-128 (244)
218 PF10649 DUF2478: Protein of u 42.5 45 0.00098 33.0 5.1 39 632-670 85-129 (159)
219 COG1703 ArgK Putative periplas 41.4 4E+02 0.0087 29.4 12.4 103 294-416 70-176 (323)
220 COG3181 Uncharacterized protei 40.7 5.5E+02 0.012 28.5 14.0 153 551-723 125-288 (319)
221 KOG0832 Mitochondrial/chloropl 38.0 3.4E+02 0.0073 28.7 10.6 113 547-692 107-220 (251)
222 PRK06988 putative formyltransf 36.4 1.5E+02 0.0032 32.6 8.6 13 295-307 17-29 (312)
223 TIGR01012 Sa_S2_E_A ribosomal 33.8 1.8E+02 0.0038 30.0 8.0 110 560-692 43-155 (196)
224 PF05728 UPF0227: Uncharacteri 31.5 3.5E+02 0.0076 27.4 9.7 31 386-416 61-91 (187)
225 PLN00016 RNA-binding protein; 31.0 42 0.00091 37.6 3.3 20 294-317 71-90 (378)
226 KOG2452 Formyltetrahydrofolate 30.1 48 0.001 37.8 3.4 39 255-324 1-39 (881)
227 TIGR00732 dprA DNA protecting 29.8 3.2E+02 0.007 28.4 9.4 121 548-682 74-206 (220)
228 PRK08057 cobalt-precorrin-6x r 29.5 2.4E+02 0.0051 30.1 8.4 34 641-674 191-225 (248)
229 TIGR02990 ectoine_eutA ectoine 29.1 3.2E+02 0.0068 28.9 9.3 35 381-415 179-215 (239)
230 PRK13933 stationary phase surv 28.8 7.4E+02 0.016 26.5 12.4 35 380-414 84-129 (253)
231 COG3171 Uncharacterized protei 28.7 53 0.0011 30.5 2.8 32 208-239 25-60 (119)
232 PRK13935 stationary phase surv 27.0 8E+02 0.017 26.2 12.4 34 381-414 84-128 (253)
233 PLN02657 3,8-divinyl protochlo 26.9 53 0.0011 37.2 3.2 52 237-317 43-94 (390)
234 cd03146 GAT1_Peptidase_E Type 26.1 6.8E+02 0.015 25.6 11.0 101 560-675 14-125 (212)
235 COG4088 Predicted nucleotide k 25.9 2.6E+02 0.0055 29.4 7.4 51 364-414 56-108 (261)
236 PRK11519 tyrosine kinase; Prov 25.3 1.1E+03 0.024 29.1 14.4 43 373-415 625-669 (719)
237 PF06258 Mito_fiss_Elm1: Mitoc 25.1 9.4E+02 0.02 26.4 12.7 137 546-691 111-258 (311)
238 PRK13940 glutamyl-tRNA reducta 25.1 1.1E+03 0.023 27.1 14.4 67 629-700 232-300 (414)
239 PF03358 FMN_red: NADPH-depend 25.0 82 0.0018 30.1 3.8 35 255-307 1-35 (152)
240 COG0569 TrkA K+ transport syst 24.7 2.9E+02 0.0063 28.8 8.0 34 381-414 64-101 (225)
241 TIGR01286 nifK nitrogenase mol 24.6 1.2E+03 0.026 27.7 13.9 98 559-671 192-316 (515)
242 cd01020 TroA_b Metal binding p 24.4 4E+02 0.0086 28.3 9.2 127 635-772 48-175 (264)
243 PRK12342 hypothetical protein; 23.7 1.9E+02 0.004 31.0 6.4 34 383-416 109-146 (254)
244 CHL00200 trpA tryptophan synth 23.6 9.3E+02 0.02 25.8 13.5 121 547-688 91-230 (263)
245 COG4195 Phage-related replicat 23.6 84 0.0018 31.9 3.4 61 221-298 7-67 (208)
246 TIGR02853 spore_dpaA dipicolin 23.5 3.7E+02 0.0081 29.1 8.9 104 294-413 15-120 (287)
247 TIGR01501 MthylAspMutase methy 23.4 1.9E+02 0.0042 27.8 5.8 21 202-222 99-119 (134)
248 PF13407 Peripla_BP_4: Peripla 23.3 4.5E+02 0.0098 26.9 9.3 41 633-673 48-89 (257)
249 PF03668 ATP_bind_2: P-loop AT 22.9 2.5E+02 0.0055 30.5 7.2 119 154-307 122-275 (284)
250 COG2236 Predicted phosphoribos 22.8 1.7E+02 0.0038 29.9 5.7 48 362-410 9-56 (192)
251 COG2204 AtoC Response regulato 22.8 1E+03 0.022 27.8 12.5 108 580-705 5-121 (464)
252 COG1618 Predicted nucleotide k 22.5 2.1E+02 0.0046 28.7 5.9 72 631-704 92-175 (179)
253 PRK13398 3-deoxy-7-phosphohept 22.5 9.8E+02 0.021 25.7 12.0 111 549-672 27-142 (266)
254 PRK03359 putative electron tra 22.3 2.4E+02 0.0053 30.2 6.9 34 383-416 112-149 (256)
255 PRK14982 acyl-ACP reductase; P 22.0 7.6E+02 0.016 27.6 11.0 102 632-743 208-327 (340)
256 CHL00194 ycf39 Ycf39; Provisio 22.0 68 0.0015 34.8 2.8 33 255-316 1-33 (317)
257 PRK10840 transcriptional regul 22.0 8E+02 0.017 24.5 12.3 74 631-704 39-124 (216)
258 COG0482 TrmU Predicted tRNA(5- 21.9 1.6E+02 0.0034 33.1 5.5 106 277-416 11-126 (356)
259 PTZ00254 40S ribosomal protein 21.6 3.3E+02 0.0071 29.1 7.6 109 560-692 52-165 (249)
260 PRK08229 2-dehydropantoate 2-r 21.5 74 0.0016 35.0 3.0 19 294-316 16-34 (341)
261 PF06377 Adipokin_hormo: Adipo 21.0 36 0.00078 26.8 0.3 14 212-225 2-15 (48)
262 PF02571 CbiJ: Precorrin-6x re 21.0 3.3E+02 0.0072 29.0 7.6 35 641-675 195-230 (249)
263 COG1879 RbsB ABC-type sugar tr 21.0 1E+03 0.023 25.4 11.9 46 632-677 83-129 (322)
264 PRK05331 putative phosphate ac 20.8 1.1E+03 0.024 26.2 11.9 52 557-622 9-61 (334)
265 PLN02327 CTP synthase 20.7 9.2E+02 0.02 28.9 11.7 107 562-674 280-401 (557)
266 PRK05331 putative phosphate ac 20.0 8.8E+02 0.019 27.0 11.0 34 551-587 179-212 (334)
No 1
>PLN00142 sucrose synthase
Probab=100.00 E-value=6.2e-196 Score=1701.54 Aligned_cols=783 Identities=72% Similarity=1.173 Sum_probs=758.8
Q ss_pred ChhhHHHHHHHH----HHHHHHHHhcCCCccchhhHHHHHHhc-c-C-------CCcHHHHHhhcceeeecCCcEEEEEe
Q 003947 1 MAQQFIETLSKS----LTLLSSIERLGCGIYKRQQILSLVDAE-S-N-------GAAIADVLNATQEAAVSSPWVALALR 67 (784)
Q Consensus 1 ~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~-------~~~~~~~~~~~~~~~~~~~~~~~~~~ 67 (784)
|+|+|+++|++| ++||+||+++||++|++|||+++|+++ . + +|+||++|++||||||.|||||||||
T Consensus 13 ~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~r 92 (815)
T PLN00142 13 IRERVPDALSQHRNELKALLSRYVAQGKGILQPHQLIDELEAVIDDDEERKKLLDGPFGDILRSTQEAIVLPPFVALAVR 92 (815)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCCcccHHHHHHHHHHHhhhhhhhhhhccCcHHHHHHhhhhhhccCCeeEEEEc
Confidence 589999999999 999999999999999999999999888 2 1 89999999999999999999999999
Q ss_pred cCCceEEEEEEeeCcceeeecChhhhhhhhcccccCCCCCCCCceeeeCccCcC-CCCCCCCCCCCchhhhhhhhhhhcc
Q 003947 68 TSPGVWCYIRVNVQTVDVEEISVSKYLLFKEEIVDGRKSNGNFAFEVDFEPFRA-LPHPTLSNSIGHGMEFLNRHMSAKL 146 (784)
Q Consensus 68 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (784)
||||+|||||||++||+||+|||+|||+|||+|||+++ +++++|||||+|||+ |||||+|+||||||+||||||||||
T Consensus 93 ~~~~~~~~~~~~~~~l~~~~~~~~~yl~~ke~~~~~~~-~~~~~le~d~~pf~~~~p~~~~~~~ig~g~~~~~~~~~~~~ 171 (815)
T PLN00142 93 PRPGVWEYVRVNVSELSVEELTVSEYLKFKEELVDGSW-NDNFVLELDFEPFNASFPRPTLSSSIGNGVQFLNRHLSSKL 171 (815)
T ss_pred CCCcceEEEEEEhhhCceeeecHHHhhhhhHhhcCccc-CCCceEEEecccccccCCCCCCcccccccHHHHHHHHHHhh
Confidence 99999999999999999999999999999999999984 799999999999999 9999999999999999999999999
Q ss_pred cCCccchHHHHHHHHhccCCCceeeccccCCCHHHHHHHHHHHHHHhhcCCCCCChHHHHHHHHhcCcccccCCchHHHH
Q 003947 147 FNDKESMQSLLEFLRVHSHMGKNMMLNEKIQDLGTLQSSLRMAEKYLSMLAPDTSYAEFEQKFQEIGLERGWGDNAEHVL 226 (784)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 226 (784)
|+|++++++||||||+|+|+|++|||||||+|+++||+||++|++||+++|+||||++|+++||+|||||||||||+||+
T Consensus 172 ~~~~~~~~~l~~~~~~~~~~g~~~~~~~~~~~~~~l~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~g~~~gwg~~~~~~~ 251 (815)
T PLN00142 172 FRDKESLEPLLDFLRAHNHKGETLMLNDRIQTLSKLQSALRKAEEYLSKLPKDTPYSEFEHRFQELGLEKGWGDTAERVL 251 (815)
T ss_pred ccCchhhhhHHHHHHHhhcCCceeeecCCCCCHHHHHHHHHHHHHHHHhCCCCCCchHHHHHHHHhCCCCCcCccHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhcCCCcchHhHHhcCCCcceEEEEEccCccccccCccCCCCcccchhhhHHHHHHHHHHHHHHHHHcCCCc
Q 003947 227 GMIQLLLDLLQAPESSTLETFLGKIPRVFNVVIFTPHGYFAQDNVLGYPDTGGQVVYILDQVRALENEMLLRIKQQGLDI 306 (784)
Q Consensus 227 ~~~~~~~~~~~~p~~~~~~~~~~~~p~~mkI~ivs~h~~~~~~~~lg~p~tGG~~vyv~d~~raLe~eLa~~L~~~GheV 306 (784)
|||++|+|+|++|||++||+||+||||+|||+|||+||+|+|.+++|+||||||++||+|||||||++|+++|+++||+|
T Consensus 252 ~~~~~l~~~~~~p~~~~~e~f~~~~p~~~~i~~iS~Hg~~~~~~~lG~~DtGGQ~vYVl~~aral~~el~~~l~~~G~~v 331 (815)
T PLN00142 252 ETIHLLLDLLQAPDPSTLEKFLGRIPMVFNVVIFSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKQQGLDI 331 (815)
T ss_pred HHHHHHHHHHhCCChhHHHHHHhhhhHhHhhheecccccccccccCCCCCCCCceehHHHHHHHHHHHHHHHHHhcCCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccceEEEecCCCCCCCCCcCcceeeecCcCCeEEEEccCCCCcccccccccccCChhhHHHHHHHHHHHHHHHcCCCceE
Q 003947 307 TPRILIITRLLPDAVGTTCGQRVEKVYGTKYSDILRVPFRTEEGIVRKWISRFEVWPYLETFTEDVATEIIQELQCKPDL 386 (784)
Q Consensus 307 ~~~i~VvTr~~~~~~g~~~~~~~e~v~~~~~v~IlrvP~~~~~~~~~~~isr~~l~~yl~~f~~~~~~~i~~~~~~~pDI 386 (784)
+|+|+|+||.+++..|++|++++|.+.++++++|+|+|+++.++++++|++|+++|||++.|+.++.+.+.+..+++||+
T Consensus 332 ~~~v~i~TR~i~~~~~~~~~~~~e~v~~~~~~~I~rvP~g~~~~~l~~~i~ke~l~p~L~~f~~~~~~~~~~~~~~~PDl 411 (815)
T PLN00142 332 KPQILIVTRLIPDAKGTTCNQRLEKVSGTEHSHILRVPFRTEKGILRKWISRFDVWPYLETFAEDAASEILAELQGKPDL 411 (815)
T ss_pred cceeEEEEeccCCccCCcccCcceeccCCCceEEEecCCCCCccccccccCHHHHHHHHHHHHHHHHHHHHHhcCCCCCE
Confidence 99999999999999999999999999999999999999999778999999999999999999999999998776789999
Q ss_pred EEEcCCChhHHHHHHHHhCCCcEEEEecCCcccCCCCCcchhhhccccccccchhhhhHHHhcccCEEEecChHhHhhcc
Q 003947 387 IIGNYSDGNIVASLLAHKLDVTQCTIAHALELTKYPDSDINWKKLDDKYHFSCQFTADLFAMNRTDFIITSTFQEIAGSK 466 (784)
Q Consensus 387 Ih~~~~~~~lva~llar~~gvp~V~t~H~l~~~k~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~~~~~~~~ 466 (784)
||+|||+++++|.++++++|+|+|+|+|++++.|+..++.+|+..+.+|++++|+++|.++++.||+||++|.+++++++
T Consensus 412 IHaHYwdsg~vA~~La~~lgVP~v~T~HsL~k~K~~~~~~~~~~~e~~y~~~~r~~aE~~a~~~Ad~IIasT~qEi~g~~ 491 (815)
T PLN00142 412 IIGNYSDGNLVASLLAHKLGVTQCTIAHALEKTKYPDSDIYWKKFDDKYHFSCQFTADLIAMNHADFIITSTYQEIAGSK 491 (815)
T ss_pred EEECCccHHHHHHHHHHHhCCCEEEEcccchhhhccccCCcccccchhhhhhhchHHHHHHHHhhhHHHhCcHHHHhccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccccccccccccccceeeecCCCCCCCceEEecCCCCCCCCCCCcHHHHhhhcchhhhHHhhcCchhhhhhhccccCC
Q 003947 467 DTVGQYESHTAFSLPGLYRVVNGIDAFDPKFNIVSPGADMTIYFPYMEEKRRLKHFHSEIEELLYSPVENKEHLCVLKDS 546 (784)
Q Consensus 467 ~~vgqYe~~~~f~~p~l~~~~~gi~~f~~k~~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~~gll~~~ 546 (784)
+.++||++|.+|+||++|++++|++++++|++|||||+|...|.|+....++++.+++.+++.+|++.+.++++|++.++
T Consensus 492 ~~i~qy~sh~~f~~p~L~rvv~GId~~~~ki~VVppGvD~~~F~P~~~~~~rl~~l~n~I~~~l~~~~~~~e~lg~l~~~ 571 (815)
T PLN00142 492 DTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEKQKRLTSLHPSIEELLYSPEQNDEHIGYLKDR 571 (815)
T ss_pred chhhhhhcccccccchhhhhhccccccccCeeEECCCCChhhcCCCChHHhhHHhhcccchhhcCChHHHHHHhCCccCC
Confidence 99999999999999999999999999999999999999999999998888888889999999999999999999987788
Q ss_pred CCCEEEEEecccCCCChHHHHHHHHHhHccCCCeEEEEEeCCCC-CCcccHHHHHHHHHHHHHHHhcCCCCcEEEccCcC
Q 003947 547 SKPILFTMARLDRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRR-KESKDLEEQAEMKKMYGLIDTYKLNGQFRWISSQM 625 (784)
Q Consensus 547 ~k~iIl~vGRL~~~Kgi~~LieA~~~l~~~~~~v~LvIVG~g~~-~~s~d~ee~~~~~~l~~li~~l~L~~~V~flG~~~ 625 (784)
++++|+++||+++.||++.|++|++++++.+++++|+|||++.+ ..+.+.++.+++++++++++++++.++|+|+|.+.
T Consensus 572 ~kpvIl~VGRL~~~KGid~LIeA~a~l~~l~~~~~LVIVGgg~d~~~s~d~ee~~el~~L~~La~~lgL~~~V~flG~~~ 651 (815)
T PLN00142 572 KKPIIFSMARLDRVKNLTGLVEWYGKNKRLRELVNLVVVGGFIDPSKSKDREEIAEIKKMHSLIEKYNLKGQFRWIAAQT 651 (815)
T ss_pred CCcEEEEEecCcccCCHHHHHHHHHHHHHhCCCcEEEEEECCccccccccHHHHHHHHHHHHHHHHcCCCCcEEEcCCcC
Confidence 89999999999999999999999999988788999999999843 44557777788899999999999999999999888
Q ss_pred CcCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHHHHHHHHHHHHH
Q 003947 626 NRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCNGGPAEIIVHGKSGFHIDPYKGDQATGILVDFFE 705 (784)
Q Consensus 626 ~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMA~GlPVIaT~~GG~~EiI~dg~~G~li~p~d~e~lAe~I~~~l~ 705 (784)
+..+.+++++++++++|+||+||.+|+||++++||||||+|||||+.||+.|+|.+|.+|++++|+|++++|++|.++++
T Consensus 652 ~~~~~~eLyr~iadaaDVfVlPS~~EgFGLvvLEAMA~GlPVVATdvGG~~EIV~dG~tG~LV~P~D~eaLA~aI~~lLe 731 (815)
T PLN00142 652 NRVRNGELYRYIADTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCQGGPAEIIVDGVSGFHIDPYHGDEAANKIADFFE 731 (815)
T ss_pred CcccHHHHHHHHHhhCCEEEeCCcccCCCHHHHHHHHcCCCEEEcCCCCHHHHhcCCCcEEEeCCCCHHHHHHHHHHHHH
Confidence 88888999999997789999999999999999999999999999999999999999999999999999999999999998
Q ss_pred HhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHhhhhhhhhhhhHHHHhhHHHHHHHhhccccccccCcccCC
Q 003947 706 KCKVDPGHWDEISQGGLKRIQEKYTWKIYSERLLNLSGVYGFWKHLSKLDCREKNRYLEMFYSLMYRKQVQTVPLAVDE 784 (784)
Q Consensus 706 ~ll~dp~~~~~m~~~a~~~v~~~ytw~~~a~~ll~ly~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~ 784 (784)
+|+.||+.|++|+++|++++.++|||+.++++++++..+||||+++|+++|+|++|||||||+|+|||||++||+++|+
T Consensus 732 kLl~Dp~lr~~mg~~Ar~rv~e~FSWe~~A~rll~L~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~ 810 (815)
T PLN00142 732 KCKEDPSYWNKISDAGLQRIYECYTWKIYAERLLTLGGVYGFWKYVSKLERRETRRYLEMFYNLKFRELAKTVPLAVDD 810 (815)
T ss_pred HhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhhcchhhhcchHhHHHHHHHHHHHHHhhhHHHhhcCCccccc
Confidence 8999999999999999999999999999999999999999999999999999999999999999999999999999985
No 2
>TIGR02470 sucr_synth sucrose synthase. This model represents sucrose synthase, an enzyme that, despite its name, generally uses rather produces sucrose. Sucrose plus UDP (or ADP) becomes D-fructose plus UDP-glucose (or ADP-glucose), which is then available for cell wall (or starch) biosynthesis. The enzyme is homologous to sucrose phosphate synthase, which catalyzes the penultimate step in sucrose synthesis. Sucrose synthase is found, so far, exclusively in plants and cyanobacteria.
Probab=100.00 E-value=1.1e-191 Score=1666.41 Aligned_cols=768 Identities=68% Similarity=1.118 Sum_probs=743.8
Q ss_pred HHHHHHHHhcCCCccchhhHHHHHHhc-c-C-------CCcHHHHHhhcceeeecCCcEEEEEecCCceEEEEEEeeCcc
Q 003947 13 LTLLSSIERLGCGIYKRQQILSLVDAE-S-N-------GAAIADVLNATQEAAVSSPWVALALRTSPGVWCYIRVNVQTV 83 (784)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (784)
++||++|+++||++||+|||+++|+++ . + +|+||++|++||||||.|||||||||||||+|||||||++||
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qe~~~~~~~~~~~~r~~~~~~~~~~~~~~~l 84 (784)
T TIGR02470 5 RQLLSRYVSQGKRYLLRHQLLDEFEQYCSDADKEKKLSESALGKLIFSTQEAIVLPPWVALAVRPRIGVWEYVRVNVEEL 84 (784)
T ss_pred HHHHHHHHhcCCCcccHHHHHHHHHHHhhhhhhhhhhccCcHHHHHHhhhhheecCCeeEEEEcCCCcceEEEEEEhhhC
Confidence 799999999999999999999999988 2 1 899999999999999999999999999999999999999999
Q ss_pred eeeecChhhhhhhhcccccCCCCCCCCceeeeCccCcC-CCCCCCCCCCCchhhhhhhhhhhcccCCccchHHHHHHHHh
Q 003947 84 DVEEISVSKYLLFKEEIVDGRKSNGNFAFEVDFEPFRA-LPHPTLSNSIGHGMEFLNRHMSAKLFNDKESMQSLLEFLRV 162 (784)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (784)
+||+|||+|||+|||+|||++ .+++++|||||+|||+ ||+||+||||||||+|||||||||||+|++++++||||||.
T Consensus 85 ~~~~~~~~~yl~~ke~~~~~~-~~~~~~le~d~~pf~~~~p~~~~~~~ig~g~~~~~r~~s~~~~~~~~~~~~~~~~l~~ 163 (784)
T TIGR02470 85 SVEELTISEYLDFKEQLVNGH-PNDGFVLELDFEPFNASFPRPSDSKSIGNGVQFLNRHLSSKLFQDPESMEPLLNFLRV 163 (784)
T ss_pred ceeeecHHHHhhhhHhhcCcc-cCCCceEEEecccccccCCCCCCcccccccHHHHHHHHHHHhcCCchhhhhHHHHHHH
Confidence 999999999999999999998 5899999999999999 99999999999999999999999999999999999999999
Q ss_pred ccCCCceeeccccCCCHHHHHHHHHHHHHHhhcCCCCCChHHHHHHHHhcCcccccCCchHHHHHHHHHHHHhhcCCCcc
Q 003947 163 HSHMGKNMMLNEKIQDLGTLQSSLRMAEKYLSMLAPDTSYAEFEQKFQEIGLERGWGDNAEHVLGMIQLLLDLLQAPESS 242 (784)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~p~~~ 242 (784)
|+|+|++|||||||+|+++||+||++|++||+++|+||||++|+++||+|||||||||||+||+|||++|+++|++|||+
T Consensus 164 ~~~~g~~~~~~~~~~~~~~l~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~g~~~gwg~~~~~~~~~~~~l~~~~~~p~~~ 243 (784)
T TIGR02470 164 HNYNGIQLMINDRIQSVSHLQSQLRKAEEFLSALPPDTPYSEFEFELQELGFEPGWGDTAQRVLETLHLLDDLLEAPDPS 243 (784)
T ss_pred hccCCceeeecCCCCCHHHHHHHHHHHHHHHHhCCCCCChhHHHHHHHHhCCCCCcCccHHHHHHHHHHHHHHHhCCChh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHhHHhcCCCcceEEEEEccCccccccCccCCCCcccchhhhHHHHHHHHHHHHHHHHHcCCCcccceEEEecCCCCCCC
Q 003947 243 TLETFLGKIPRVFNVVIFTPHGYFAQDNVLGYPDTGGQVVYILDQVRALENEMLLRIKQQGLDITPRILIITRLLPDAVG 322 (784)
Q Consensus 243 ~~~~~~~~~p~~mkI~ivs~h~~~~~~~~lg~p~tGG~~vyv~d~~raLe~eLa~~L~~~GheV~~~i~VvTr~~~~~~g 322 (784)
+||+|++||||+|||+|||+||+|+|.+++|+||||||++||++|||+||++|+++|+++||+|+|+|+|+||.+++..+
T Consensus 244 ~~e~f~~~~p~~~rIa~lS~Hg~~~~~~~lG~~DtGGq~vYV~elaraL~~~~~~~La~~G~~v~~~V~I~TR~~~~~~~ 323 (784)
T TIGR02470 244 VLEAFLGRIPMVFNVVILSPHGYFGQENVLGLPDTGGQVVYILDQVRALENEMLQRIKLQGLEITPKILIVTRLIPDAEG 323 (784)
T ss_pred HHHHHHhhCCccceEEEEecccccCCccccCCCCCCCceeHHHHHHHHHHHHHHHHHHhcCCCccceEEEEecCCCCccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcCcceeeecCcCCeEEEEccCCCCcc-cccccccccCChhhHHHHHHHHHHHHHHHcCCCceEEEEcCCChhHHHHHH
Q 003947 323 TTCGQRVEKVYGTKYSDILRVPFRTEEG-IVRKWISRFEVWPYLETFTEDVATEIIQELQCKPDLIIGNYSDGNIVASLL 401 (784)
Q Consensus 323 ~~~~~~~e~v~~~~~v~IlrvP~~~~~~-~~~~~isr~~l~~yl~~f~~~~~~~i~~~~~~~pDIIh~~~~~~~lva~ll 401 (784)
++|+++.+.+.+++|++|+|+|+++..+ ++++|++++++|||++.|+.++.+.+....+++||+||+|||+++++|.++
T Consensus 324 ~~~~~~~e~~~~~~~~~I~rvp~g~~~~~~~~~~i~k~~l~p~l~~f~~~~~~~~~~~~~~~pDlIHahy~d~glva~ll 403 (784)
T TIGR02470 324 TTCNQRLEKVYGTEHAWILRVPFRTENGIILRNWISRFEIWPYLETFAEDAEKEILAELQGKPDLIIGNYSDGNLVASLL 403 (784)
T ss_pred cccccccccccCCCceEEEEecCCCCcccccccccCHHHHHHHHHHHHHHHHHHHHHhcCCCCCEEEECCCchHHHHHHH
Confidence 9999999999999999999999999877 799999999999999999999999998777789999999999999999999
Q ss_pred HHhCCCcEEEEecCCcccCCCCCcchhhhccccccccchhhhhHHHhcccCEEEecChHhHhhccccccccccccccccc
Q 003947 402 AHKLDVTQCTIAHALELTKYPDSDINWKKLDDKYHFSCQFTADLFAMNRTDFIITSTFQEIAGSKDTVGQYESHTAFSLP 481 (784)
Q Consensus 402 ar~~gvp~V~t~H~l~~~k~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~~~~~~~~~~vgqYe~~~~f~~p 481 (784)
++++|+|+|+|+|++++.|+..++.+|...+.+|++++++++|.++++.||+|||+|+++++++++.++||++|..||||
T Consensus 404 a~~lgVP~v~t~HsL~~~K~~~~g~~~~~~e~~~~~~~r~~ae~~~~~~AD~IItsT~qEi~~~~~~v~qY~s~~~ft~p 483 (784)
T TIGR02470 404 ARKLGVTQCTIAHALEKTKYPDSDIYWQEFEDKYHFSCQFTADLIAMNAADFIITSTYQEIAGTKDSVGQYESHQAFTMP 483 (784)
T ss_pred HHhcCCCEEEECCcchhhcccccccccccchhHHHhhhhhhHHHHHHhcCCEEEECcHHHhhhhhhhhhhhhhccccccc
Confidence 99999999999999999999999999998889999999999999999999999999999999999999999999999999
Q ss_pred cceeeecCCCCCCCceEEecCCCCCCCCCCCcHHHHhhhcchhhhHHhhcCchhhhhhhccccCCCCCEEEEEecccCCC
Q 003947 482 GLYRVVNGIDAFDPKFNIVSPGADMTIYFPYMEEKRRLKHFHSEIEELLYSPVENKEHLCVLKDSSKPILFTMARLDRVK 561 (784)
Q Consensus 482 ~l~~~~~gi~~f~~k~~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~~gll~~~~k~iIl~vGRL~~~K 561 (784)
++|++++|++++++|++|||||+|.+.|+|++...++....++.+++++|++++.++++|++.++++|+|+++||+++.|
T Consensus 484 ~Ly~vvnGid~~~~Ki~VVpPGVD~~iF~P~~~~~~r~~~~~~~ie~ll~~~~~~~~~~G~l~d~~kpiIl~VGRL~~~K 563 (784)
T TIGR02470 484 GLYRVVHGIDVFDPKFNIVSPGADESIYFPYSDKEKRLTNLHPEIEELLFSLEDNDEHYGYLKDPNKPIIFSMARLDRVK 563 (784)
T ss_pred ceeeeecCccCCcCCeEEECCCcChhhcCCCCchhhhhhhhhcchhhhccchhhHHHHhCCCCCCCCcEEEEEeCCCccC
Confidence 99999999999999999999999999999999888888888899999999999999999988888999999999999999
Q ss_pred ChHHHHHHHHHhHccCCCeEEEEEeCCCC-CCcccHHHHHHHHHHHHHHHhcCCCCcEEEccCcCCcCChhHHHHHHHcc
Q 003947 562 NLTGLVEWYGKNAKLRELVNLVVVGGDRR-KESKDLEEQAEMKKMYGLIDTYKLNGQFRWISSQMNRVRNGELYRYICDT 640 (784)
Q Consensus 562 gi~~LieA~~~l~~~~~~v~LvIVG~g~~-~~s~d~ee~~~~~~l~~li~~l~L~~~V~flG~~~~~v~~~el~~~la~a 640 (784)
|++.|++|+++++++.++++|+|||++.+ ..+.+.++.+++++++++++++++.++|+|+|.+.+..+.+++|++++++
T Consensus 564 Gid~LIeA~~~l~~l~~~~~LVIVGGg~~~~~s~d~ee~~~i~~L~~la~~~gL~g~V~flG~~~~~~~~~elyr~iAd~ 643 (784)
T TIGR02470 564 NLTGLVECYGRSPKLRELVNLVVVAGKLDAKESKDREEQAEIEKMHNLIDQYQLHGQIRWIGAQLNRVRNGELYRYIADT 643 (784)
T ss_pred CHHHHHHHHHHhHhhCCCeEEEEEeCCcccccccchhHHHHHHHHHHHHHHhCCCCeEEEccCcCCcccHHHHHHHhhcc
Confidence 99999999999887778899999999865 55678888889999999999999999999999876677788999999877
Q ss_pred ccEEEeCCCCCCCcHHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHH
Q 003947 641 KGAFVQPALYEAFGLTVVEAMTCGLPTFATCNGGPAEIIVHGKSGFHIDPYKGDQATGILVDFFEKCKVDPGHWDEISQG 720 (784)
Q Consensus 641 advfV~PS~~E~fGltvlEAMA~GlPVIaT~~GG~~EiI~dg~~G~li~p~d~e~lAe~I~~~l~~ll~dp~~~~~m~~~ 720 (784)
+|+||+||++|+||++++||||||+|||||+.||+.|+|.+|.+|++++|+|++++|++|.+++++|+.||+.|++|+++
T Consensus 644 adVfV~PS~~EpFGLvvLEAMAcGlPVVAT~~GG~~EiV~dg~tGfLVdp~D~eaLA~aL~~ll~kll~dp~~~~~ms~~ 723 (784)
T TIGR02470 644 KGIFVQPALYEAFGLTVLEAMTCGLPTFATRFGGPLEIIQDGVSGFHIDPYHGEEAAEKIVDFFEKCDEDPSYWQKISQG 723 (784)
T ss_pred CcEEEECCcccCCCHHHHHHHHcCCCEEEcCCCCHHHHhcCCCcEEEeCCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHH
Confidence 89999999999999999999999999999999999999999999999999999999999999998899999999999999
Q ss_pred HHHHHHHhCCHHHHHHHHHHHHHHhhhhhhhhhhhHHHHhhHHHHHHHhhccccccccCcc
Q 003947 721 GLKRIQEKYTWKIYSERLLNLSGVYGFWKHLSKLDCREKNRYLEMFYSLMYRKQVQTVPLA 781 (784)
Q Consensus 721 a~~~v~~~ytw~~~a~~ll~ly~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~ 781 (784)
|++++.++|||+.++++++++..+||||+++|+++|+|++|||||||+|+|||||++||++
T Consensus 724 a~~rV~~~FSW~~~A~~ll~l~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~ 784 (784)
T TIGR02470 724 GLQRIYEKYTWKIYSERLLTLAGIYGFWKFVSKLEREETRRYLEMFYHLKYRPLAEAVPLA 784 (784)
T ss_pred HHHHHHHhCCHHHHHHHHHHHHhhhhHhhhccHHHHHHHHHHHHHHHHhhhHHHHhhccCC
Confidence 9999999999999999999999999999999999999999999999999999999999975
No 3
>PF00862 Sucrose_synth: Sucrose synthase; InterPro: IPR000368 Sucrose synthases catalyse the synthesis of sucrose 2.4.1.13 from EC in the following reaction: UDP-glucose + D-fructose = UDP + sucrose This family includes the bulk of the sucrose synthase protein. However the carboxyl terminal region of the sucrose synthases belongs to the glycosyl transferase family IPR001296 from INTERPRO. This enzyme is found mainly in plants but also appears in bacteria.; GO: 0005985 sucrose metabolic process; PDB: 2R60_A 2R66_A 2R68_A 3S27_G 3S29_A 3S28_A.
Probab=100.00 E-value=5.8e-167 Score=1355.53 Aligned_cols=531 Identities=64% Similarity=1.069 Sum_probs=462.5
Q ss_pred ChhhHHHHHHHH----HHHHHHHHhcCCCccchhhHHHHHHhc-c-C-------CCcHHHHHhhcceeeecCCcEEEEEe
Q 003947 1 MAQQFIETLSKS----LTLLSSIERLGCGIYKRQQILSLVDAE-S-N-------GAAIADVLNATQEAAVSSPWVALALR 67 (784)
Q Consensus 1 ~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~-------~~~~~~~~~~~~~~~~~~~~~~~~~~ 67 (784)
|||+|+++|++| ++||+||+++||++||||||+++|+++ + + +|+||++|++||||||.|||||||||
T Consensus 6 ~~e~~~~~L~~~R~~l~~llsr~~~~gk~~l~r~~ll~ef~~~~~~~~~~~~~~~g~lg~ll~~tQEaIv~pp~v~lavR 85 (550)
T PF00862_consen 6 IRERVPDTLSQHRNELKRLLSRYVAQGKRYLLRHDLLDEFEAYCEDDKEKLFLLSGPLGELLRSTQEAIVLPPWVALAVR 85 (550)
T ss_dssp --GGGTTTGGGTTSHHHHHHHHHHHHHTSSEEEECHHHHHTHHHHSTTTGCCT--STHHHHHHTEEEEEECSSEEEEEEE
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHcCcccccHHHHHHHHHHHHhcccchhhcccchHHHHHHhcceeEecCCeEEEEEc
Confidence 689999999999 999999999999999999999999998 3 2 79999999999999999999999999
Q ss_pred cCCceEEEEEEeeCcceeeecChhhhhhhhcccccCCCCCCCCceeeeCccCcC-CCCCCCCCCCCchhhhhhhhhhhcc
Q 003947 68 TSPGVWCYIRVNVQTVDVEEISVSKYLLFKEEIVDGRKSNGNFAFEVDFEPFRA-LPHPTLSNSIGHGMEFLNRHMSAKL 146 (784)
Q Consensus 68 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (784)
||||+|||||||+++|+||+|||+|||+|||+|||++ ++++++|||||+|||+ ||+|++||||||||+||||||||||
T Consensus 86 Prpg~WeyvRv~~~~L~vE~ltvseyL~fKE~LV~~~-~~~~~vLElDf~PFn~~~Prlt~s~sIGnGv~FLNR~LSskl 164 (550)
T PF00862_consen 86 PRPGVWEYVRVNVDDLSVEELTVSEYLKFKERLVDGS-ANDEFVLELDFEPFNASFPRLTDSSSIGNGVQFLNRHLSSKL 164 (550)
T ss_dssp EETTEEEEEEEESSSSEEEEE-HHHHHHHHHHHHHSS--SSTTS-EEE-GGGHTTS----SGGGTTBHHHHHHHHHHHHH
T ss_pred CCCccEEEEEEEhhhCcceecCHHHHHHHHHHHcCCc-cCCCCeeeeecccccccCCCCCCcccccccHHHHHHHHHHHh
Confidence 9999999999999999999999999999999999998 7899999999999999 9999999999999999999999999
Q ss_pred cCCccchHHHHHHHHhccCCCceeeccccCCCHHHHHHHHHHHHHHhhcCCCCCChHHHHHHHHhcCcccccCCchHHHH
Q 003947 147 FNDKESMQSLLEFLRVHSHMGKNMMLNEKIQDLGTLQSSLRMAEKYLSMLAPDTSYAEFEQKFQEIGLERGWGDNAEHVL 226 (784)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 226 (784)
|+|++++++||||||.|+|+|++|||||||+|+++||+||++|++||+++|+||||++|+++||+|||||||||||+||+
T Consensus 165 f~d~e~~~~Ll~fL~~h~~~G~~Lmlndri~s~~~L~~aL~~A~~~L~~~p~~tpy~~f~~~~q~~Gfe~GWG~ta~rv~ 244 (550)
T PF00862_consen 165 FQDKESLEPLLDFLRVHNYNGQQLMLNDRIQSVSKLQSALRKAEEFLSKLPPDTPYSEFEHKLQELGFEPGWGDTAERVL 244 (550)
T ss_dssp TT-HHHHHHHHHHHHH-EETTEEBSB-TT--SHHHHHHHHHHHHHHHHHS-TT-BHHHHHHHHHHHTB-B-S-SBHHHHH
T ss_pred cCChHHHHHHHHHHHHhccCCeEeeecCCCCCHHHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHhCCCCCCCCcHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhcCCCcchHhHHhcCCCcceEEEEEccCccccccCccCCCCcccchhhhHHHHHHHHHHHHHHHHHcCCCc
Q 003947 227 GMIQLLLDLLQAPESSTLETFLGKIPRVFNVVIFTPHGYFAQDNVLGYPDTGGQVVYILDQVRALENEMLLRIKQQGLDI 306 (784)
Q Consensus 227 ~~~~~~~~~~~~p~~~~~~~~~~~~p~~mkI~ivs~h~~~~~~~~lg~p~tGG~~vyv~d~~raLe~eLa~~L~~~GheV 306 (784)
|||++|+++|+||||++||+|++||||+++|+++||||||+|+||+|+||||||++||+|||||||++|..+++.+|.+|
T Consensus 245 et~~lL~dll~aPdp~~LE~Fl~RiPmvf~vvliSpHG~f~q~nvLG~pDTGGQVvYVleqarALe~e~~~ri~~~gl~i 324 (550)
T PF00862_consen 245 ETMHLLSDLLEAPDPSTLEKFLSRIPMVFNVVLISPHGYFGQENVLGRPDTGGQVVYVLEQARALENEMLYRIKLQGLDI 324 (550)
T ss_dssp HHHHHHHHHHHS--HHHHHHHHHHS---SEEEEE--SS--STTSTTSSTTSSHHHHHHHHHHHHHHHHTHHHHHHTT---
T ss_pred HHHHHHHHHHhCCCchHHHHHhhhcceeEEEEEEcCccccccccccCCCCCCCcEEEEeHHHHHHHHHHHHHHHhcCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccceEEEecCCCCCCCCCcCcceeeecCcCCeEEEEccCCCCcccccccccccCChhhHHHHHHHHHHHHHHHcCCCceE
Q 003947 307 TPRILIITRLLPDAVGTTCGQRVEKVYGTKYSDILRVPFRTEEGIVRKWISRFEVWPYLETFTEDVATEIIQELQCKPDL 386 (784)
Q Consensus 307 ~~~i~VvTr~~~~~~g~~~~~~~e~v~~~~~v~IlrvP~~~~~~~~~~~isr~~l~~yl~~f~~~~~~~i~~~~~~~pDI 386 (784)
.|+|+|+||.+|++.||+|+++++++.+++|++|+|+||++.+|++++|+||+++|||++.|+.++.+++.++++++||+
T Consensus 325 ~p~i~i~TRlIpd~~~t~~~q~le~~~gt~~a~IlRvPF~~~~gi~~kwisrf~lWPyLe~fa~d~~~~i~~e~~~~Pdl 404 (550)
T PF00862_consen 325 TPKIDIVTRLIPDAKGTTCNQRLEKVSGTENARILRVPFGPEKGILRKWISRFDLWPYLEEFADDAEREILAELQGKPDL 404 (550)
T ss_dssp --EEEEEEE--TBTTCGGGTSSEEEETTESSEEEEEE-ESESTEEE-S---GGG-GGGHHHHHHHHHHHHHHHHTS--SE
T ss_pred CCceeeecccccCCcCCCccccccccCCCCCcEEEEecCCCCcchhhhccchhhchhhHHHHHHHHHHHHHHHhCCCCcE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999998999999
Q ss_pred EEEcCCChhHHHHHHHHhCCCcEEEEecCCcccCCCCCcchhhhccccccccchhhhhHHHhcccCEEEecChHhHhhcc
Q 003947 387 IIGNYSDGNIVASLLAHKLDVTQCTIAHALELTKYPDSDINWKKLDDKYHFSCQFTADLFAMNRTDFIITSTFQEIAGSK 466 (784)
Q Consensus 387 Ih~~~~~~~lva~llar~~gvp~V~t~H~l~~~k~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~~~~~~~~ 466 (784)
||+||+++|++|.++++++|+|+|+|+|+++++||+.++++|+.++.+|||+|||++|.++|+.||+|||||+||++|++
T Consensus 405 I~GnYsDgnlvA~LLs~~lgv~~~~iaHsLek~Ky~~s~~~w~e~e~~Yhfs~qftAd~iamn~adfIItST~QEI~g~~ 484 (550)
T PF00862_consen 405 IIGNYSDGNLVASLLSRKLGVTQCFIAHSLEKTKYEDSDLYWKEIEEKYHFSCQFTADLIAMNAADFIITSTYQEIAGQK 484 (550)
T ss_dssp EEEEHHHHHHHHHHHHHHHT-EEEEE-SS-HHHHHHTTTTTSHHHHHHH-HHHHHHHHHHHHHHSSEEEESSHHHHHB-S
T ss_pred EEeccCcchHHHHHHHhhcCCceehhhhccccccccccCCCHHHHHhhccchhhhhHHHHHhhcCCEEEEcchHhhcCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccccccccccccccceeeecCCCCCCCceEEecCCCCCCCCCCCcHHHHhhhcchhhhHHhhcC
Q 003947 467 DTVGQYESHTAFSLPGLYRVVNGIDAFDPKFNIVSPGADMTIYFPYMEEKRRLKHFHSEIEELLYS 532 (784)
Q Consensus 467 ~~vgqYe~~~~f~~p~l~~~~~gi~~f~~k~~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~ 532 (784)
+.+||||+|++||||+|||+++||++|+|||+|||||+|.++|+|++++++|++.+|++|+++||+
T Consensus 485 ~~~gqyes~~~ftlpgLyrvv~Gi~vFdPkfNiv~PGad~~iyFpyt~~~~Rl~~~~~~ie~Llfs 550 (550)
T PF00862_consen 485 DTVGQYESHKAFTLPGLYRVVNGIDVFDPKFNIVSPGADESIYFPYTEKERRLTSLHPEIEELLFS 550 (550)
T ss_dssp SSBHTTGGGSSEEETTTEEEEES--TT-TTEEE------TTTS--TT-TTTS-GGGHHHHHHHHH-
T ss_pred cccCCccchhhcchHhHHhhhccccccCCcccccCCCCCcceecCCccccccchhhhHHHHHHhcC
Confidence 999999999999999999999999999999999999999999999999999999999999999985
No 4
>KOG0853 consensus Glycosyltransferase [Cell wall/membrane/envelope biogenesis]
Probab=100.00 E-value=3.8e-60 Score=525.93 Aligned_cols=494 Identities=40% Similarity=0.631 Sum_probs=435.7
Q ss_pred eccccCCCHHHHHHHHHHHHHHhhcCCCCCChHHHHHHHHhcCcccccCCchHHHHHHHHHHHHhhcCCCcchHhHHhcC
Q 003947 171 MLNEKIQDLGTLQSSLRMAEKYLSMLAPDTSYAEFEQKFQEIGLERGWGDNAEHVLGMIQLLLDLLQAPESSTLETFLGK 250 (784)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ 250 (784)
|.||++++.+.+|+++.+|+..++.. .+||+..|.+.++..++++|||.++.+|.+++++++
T Consensus 1 ~~~~~~~~~~~~qk~~~~~m~~~~~~-~~t~~~~~~~~~~~~~~~~~gg~er~~v~~~~~l~s----------------- 62 (495)
T KOG0853|consen 1 MTNDSSSNISELQKVLWKAMIEKSLL-VSTPEKPFEHVTFIHPDLGIGGAERLVVDAAVHLLS----------------- 62 (495)
T ss_pred CcchhhhHHHHhhhhhhhhhhhhhcc-cccccccchhheeeccccccCchHHHhHHHHHHHHh-----------------
Confidence 78999999999999999999999999 999999999999999999999999999999999998
Q ss_pred CCcceEEEEEccCccccccCccCCCCcccchhhhHHHHHHHHHHHHHHHHHcCCCcccceEEEecCCCCCCCCCcCccee
Q 003947 251 IPRVFNVVIFTPHGYFAQDNVLGYPDTGGQVVYILDQVRALENEMLLRIKQQGLDITPRILIITRLLPDAVGTTCGQRVE 330 (784)
Q Consensus 251 ~p~~mkI~ivs~h~~~~~~~~lg~p~tGG~~vyv~d~~raLe~eLa~~L~~~GheV~~~i~VvTr~~~~~~g~~~~~~~e 330 (784)
++. ++|.||+||+++|+++++++|+.++..+..+.+.+++++|+|++...|...| +..+
T Consensus 63 ----------------~~~-~lg~~d~G~qV~~l~~h~~al~~~~~~~~~~~~l~~~~~i~vv~~~lP~~~~----~~~~ 121 (495)
T KOG0853|consen 63 ----------------GQD-VLGLPDTGGQVVYLTSHEDALEMPLLLRCFAETLDGTPPILVVGDWLPRAMG----QFLE 121 (495)
T ss_pred ----------------ccc-ccCCCCCCceEEEEehhhhhhcchHHHHHHHHHhcCCCceEEEEeecCcccc----hhhh
Confidence 555 8999999999999999999999999999999999999999999999988765 4455
Q ss_pred eecCcCCeEEEEccCCCCcccccccccccCChhhHHHHHHHHHHHHHHHcCCCceEEEEcCCChhHHHHHHHHhCCCcEE
Q 003947 331 KVYGTKYSDILRVPFRTEEGIVRKWISRFEVWPYLETFTEDVATEIIQELQCKPDLIIGNYSDGNIVASLLAHKLDVTQC 410 (784)
Q Consensus 331 ~v~~~~~v~IlrvP~~~~~~~~~~~isr~~l~~yl~~f~~~~~~~i~~~~~~~pDIIh~~~~~~~lva~llar~~gvp~V 410 (784)
...+..+++|+++|+ +++.+|+ +.+|+++..|+ .+...+.+.+.+ ||++|.++++.+..+.+++.+.|++.+
T Consensus 122 ~~~~~~~~~il~~~~----~~~~k~~--~~~d~~i~d~~-~~~~~l~~~~~~-p~~~~~i~~~~h~~~~lla~r~g~~~~ 193 (495)
T KOG0853|consen 122 QVAGCAYLRILRIPF----GILFKWA--EKVDPIIEDFV-SACVPLLKQLSG-PDVIIKIYFYCHFPDSLLAKRLGVLKV 193 (495)
T ss_pred hhhccceeEEEEecc----chhhhhh--hhhceeecchH-HHHHHHHHHhcC-CcccceeEEeccchHHHhccccCccce
Confidence 566677899999998 4556677 88999999998 566677777677 999999999999999999999999999
Q ss_pred EEecCCcccCCCCCcchhhhccccccccchhhhhHHHhcccCEEEecChHhHhhcccccccccccccccccc-ceeeecC
Q 003947 411 TIAHALELTKYPDSDINWKKLDDKYHFSCQFTADLFAMNRTDFIITSTFQEIAGSKDTVGQYESHTAFSLPG-LYRVVNG 489 (784)
Q Consensus 411 ~t~H~l~~~k~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~~~~~~~~~~vgqYe~~~~f~~p~-l~~~~~g 489 (784)
.+.|.++..++...+.+|+.+...|+++++|.++...++.+| ++++++++++.....++|+++..+++|. .++.+++
T Consensus 194 l~~~~l~~~e~e~~~~~~~~~~ns~~~~~~f~~~~~~L~~~d--~~~~y~ei~~s~~~~~~~~~~~~~~~~~r~~~~v~~ 271 (495)
T KOG0853|consen 194 LYRHALDKIEEETTGLAWKILVNSYFTKRQFKATFVSLSNSD--ITSTYPEIDGSWFTYGQYESHLELRLPVRLYRGVSG 271 (495)
T ss_pred eehhhhhhhhhhhhhccceEecchhhhhhhhhhhhhhcCCCC--cceeeccccchhccccccccchhcccccceeeeecc
Confidence 999999999999999999999999999999999999999999 8999999999999999999999999999 8899999
Q ss_pred CCCCCCceEEecCCCCCCCCCCCcHHHHhhhcchhhhHHhhcCchhhhhhhccccCCCCCEEEEEecccCCCChHHHHHH
Q 003947 490 IDAFDPKFNIVSPGADMTIYFPYMEEKRRLKHFHSEIEELLYSPVENKEHLCVLKDSSKPILFTMARLDRVKNLTGLVEW 569 (784)
Q Consensus 490 i~~f~~k~~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~~gll~~~~k~iIl~vGRL~~~Kgi~~LieA 569 (784)
+++|.++++.+++|.|.+.+.+.-. .++.. + ++
T Consensus 272 ~d~~~~siN~~~pgkd~~l~l~a~~------~~~~~----------------i---~~---------------------- 304 (495)
T KOG0853|consen 272 IDRFFPSINRFEPGKDQDLALPAFT------LLHDS----------------I---PE---------------------- 304 (495)
T ss_pred cceEeeeeeecCCCCCceeehhhHH------hhhcc----------------c---CC----------------------
Confidence 9999999999999999988777211 11100 0 00
Q ss_pred HHHhHccCCCeEEEEEeCCCCCCcccHHHHHHHHHHHHHHHhcCCCCcEEEccCcCCcCChhHHHHHHHccccEEEeCCC
Q 003947 570 YGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYGLIDTYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPAL 649 (784)
Q Consensus 570 ~~~l~~~~~~v~LvIVG~g~~~~s~d~ee~~~~~~l~~li~~l~L~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~ 649 (784)
...++.+++++|+. ..++.+.|+.+++++|+++++++++.++++|.-. ..+..+.|++++++..+|++|+.
T Consensus 305 -----~~~~~~hl~~~g~~-G~d~~~sen~~~~~el~~lie~~~l~g~~v~~~~---s~~~~~~yrl~adt~~v~~qPa~ 375 (495)
T KOG0853|consen 305 -----PSISSEHLVVAGSR-GYDERDSENVEYLKELLSLIEEYDLLGQFVWFLP---STTRVAKYRLAADTKGVLYQPAN 375 (495)
T ss_pred -----CCCCceEEEEecCC-CccccchhhHHHHHHHHHHHHHhCccCceEEEec---CCchHHHHHHHHhcceEEecCCC
Confidence 12245677777722 1346788999999999999999999766665532 33345669999998889999999
Q ss_pred CCCCcHHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhC
Q 003947 650 YEAFGLTVVEAMTCGLPTFATCNGGPAEIIVHGKSGFHIDPYKGDQATGILVDFFEKCKVDPGHWDEISQGGLKRIQEKY 729 (784)
Q Consensus 650 ~E~fGltvlEAMA~GlPVIaT~~GG~~EiI~dg~~G~li~p~d~e~lAe~I~~~l~~ll~dp~~~~~m~~~a~~~v~~~y 729 (784)
|.||+|++|||+||+|||||+.||+.|+|.++.+|++++| +.+ ....+.+++.+|..||++|.+|+++|+++|++.|
T Consensus 376 -E~FGiv~IEAMa~glPvvAt~~GGP~EiV~~~~tG~l~dp-~~e-~~~~~a~~~~kl~~~p~l~~~~~~~G~~rV~e~f 452 (495)
T KOG0853|consen 376 -EHFGIVPIEAMACGLPVVATNNGGPAEIVVHGVTGLLIDP-GQE-AVAELADALLKLRRDPELWARMGKNGLKRVKEMF 452 (495)
T ss_pred -CCccceeHHHHhcCCCEEEecCCCceEEEEcCCcceeeCC-chH-HHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999 444 3334444445888999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHhhhhhhhhhhhHHHHhhHHHHHHHhhcc
Q 003947 730 TWKIYSERLLNLSGVYGFWKHLSKLDCREKNRYLEMFYSLMYR 772 (784)
Q Consensus 730 tw~~~a~~ll~ly~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~ 772 (784)
+|+.+.+++.++...|.+|+.++...+.+.+||++|||.|.||
T Consensus 453 s~~~~~~ri~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 495 (495)
T KOG0853|consen 453 SWQHYSERIASVLGKYLQWEKVSSLDSLEDRRYISLFYALSFR 495 (495)
T ss_pred hHHHHHHHHHHHhHhcCCcccccccccccccccHHHHHHhhcC
Confidence 9999999999999999999999999999999999999999986
No 5
>TIGR02468 sucrsPsyn_pln sucrose phosphate synthase/possible sucrose phosphate phosphatase, plant. Members of this family are sucrose-phosphate synthases of plants. This enzyme is known to exist in multigene families in several species of both monocots and dicots. The N-terminal domain is the glucosyltransferase domain. Members of this family also have a variable linker region and a C-terminal domain that resembles sucrose phosphate phosphatase (SPP) (EC 3.1.3.24) (see TIGR01485), the next and final enzyme of sucrose biosynthesis. The SPP-like domain likely serves a binding and not a catalytic function, as the reported SPP is always encoded by a distinct protein.
Probab=100.00 E-value=1.8e-58 Score=551.18 Aligned_cols=456 Identities=27% Similarity=0.469 Sum_probs=353.3
Q ss_pred ceEEEEEccCccccccCc-cC-CCCcccchhhhHHHHHHHHHHHHHHHHHcC--CCcccceEEEecCCCCC-CCCCcCcc
Q 003947 254 VFNVVIFTPHGYFAQDNV-LG-YPDTGGQVVYILDQVRALENEMLLRIKQQG--LDITPRILIITRLLPDA-VGTTCGQR 328 (784)
Q Consensus 254 ~mkI~ivs~h~~~~~~~~-lg-~p~tGG~~vyv~d~~raLe~eLa~~L~~~G--heV~~~i~VvTr~~~~~-~g~~~~~~ 328 (784)
.|.|++||+||.++.+++ +| .+|||||++||++ ||++|++.| |+|+ |+||...+. .+..|.++
T Consensus 169 ~~~I~liS~HG~~~~~~~elg~~~DtGGq~vYV~E--------LAraLa~~~gv~~Vd----l~TR~~~~~~~~~~y~~p 236 (1050)
T TIGR02468 169 KLYIVLISLHGLVRGENMELGRDSDTGGQVKYVVE--------LARALGSMPGVYRVD----LLTRQVSSPDVDWSYGEP 236 (1050)
T ss_pred ceEEEEEccccCccccCcccCCCCCCCChHHHHHH--------HHHHHHhCCCCCEEE----EEeCCcCccccccccCCc
Confidence 489999999999998887 88 5999999999994 555558888 8999 999997643 24456666
Q ss_pred eeee------------cCcCCeEEEEccCCCCcccccccccccCChhhHHHHHHHHHHHHHHH-------c----CCCce
Q 003947 329 VEKV------------YGTKYSDILRVPFRTEEGIVRKWISRFEVWPYLETFTEDVATEIIQE-------L----QCKPD 385 (784)
Q Consensus 329 ~e~v------------~~~~~v~IlrvP~~~~~~~~~~~isr~~l~~yl~~f~~~~~~~i~~~-------~----~~~pD 385 (784)
.|.+ ...+|++|+|+|+++..+ |+++..+|+|+..|+..+...+.+. . ...||
T Consensus 237 ~e~~~~~~~~~~~~~~~~~~g~rIvRip~GP~~~----~l~Ke~L~~~l~ef~d~~l~~~~~~~~~~~~~~~~~~~~~pD 312 (1050)
T TIGR02468 237 TEMLTPRSSENDGDEMGESSGAYIIRIPFGPRDK----YIPKEELWPYIPEFVDGALSHIVNMSKVLGEQIGSGHPVWPY 312 (1050)
T ss_pred cccccccccccccccccCCCCeEEEEeccCCCCC----CcCHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhccccCCCCC
Confidence 5433 344699999999987633 6788999999999999999876541 1 12499
Q ss_pred EEEEcCCChhHHHHHHHHhCCCcEEEEecCCcccCCC----CCcchhhhccccccccchhhhhHHHhcccCEEEecChHh
Q 003947 386 LIIGNYSDGNIVASLLAHKLDVTQCTIAHALELTKYP----DSDINWKKLDDKYHFSCQFTADLFAMNRTDFIITSTFQE 461 (784)
Q Consensus 386 IIh~~~~~~~lva~llar~~gvp~V~t~H~l~~~k~~----~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~~~ 461 (784)
|||+||++++.++.++++.+++|+|+|.|++...|+. .+...+......|++..++.+|..+++.||.|||+|.++
T Consensus 313 vIHaHyw~sG~aa~~L~~~lgVP~V~T~HSLgr~K~~~ll~~g~~~~~~~~~~y~~~~Ri~~Ee~~l~~Ad~VIasT~qE 392 (1050)
T TIGR02468 313 VIHGHYADAGDSAALLSGALNVPMVLTGHSLGRDKLEQLLKQGRMSKEEINSTYKIMRRIEAEELSLDASEIVITSTRQE 392 (1050)
T ss_pred EEEECcchHHHHHHHHHHhhCCCEEEECccchhhhhhhhcccccccccccccccchHHHHHHHHHHHHhcCEEEEeCHHH
Confidence 9999999999999999999999999999999876643 122345566777888999999999999999999999999
Q ss_pred Hhhccccccccccccccccccceee-----ecCCC---CCCCceEEecCCCCCCCCCCCcHHHHhhhcchhhhHHhhcCc
Q 003947 462 IAGSKDTVGQYESHTAFSLPGLYRV-----VNGID---AFDPKFNIVSPGADMTIYFPYMEEKRRLKHFHSEIEELLYSP 533 (784)
Q Consensus 462 ~~~~~~~vgqYe~~~~f~~p~l~~~-----~~gi~---~f~~k~~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~ 533 (784)
++ .||..|..|. |.++++ ..|+. .+.+|+.|||||||++.|.|......+... ..++....+
T Consensus 393 ~~------eq~~lY~~~~-~~~~~~~~~~~~~gv~~~g~~~~ri~VIPpGVD~~~F~P~~~~~~~~~~---~~~~~~~~~ 462 (1050)
T TIGR02468 393 IE------EQWGLYDGFD-VILERKLRARARRGVSCYGRFMPRMAVIPPGMEFSHIVPHDGDMDGETE---GNEEHPAKP 462 (1050)
T ss_pred HH------HHHHHhccCC-chhhhhhhhhhcccccccccCCCCeEEeCCCCcHHHccCCCccccchhc---ccccccccc
Confidence 97 3555555555 444443 23433 246799999999999999986432211000 000000000
Q ss_pred hh-hh-hhhccccCCCCCEEEEEecccCCCChHHHHHHHHHhHccCC--CeEEEEEeCCCCCCcccHHHHHHHHHHHHHH
Q 003947 534 VE-NK-EHLCVLKDSSKPILFTMARLDRVKNLTGLVEWYGKNAKLRE--LVNLVVVGGDRRKESKDLEEQAEMKKMYGLI 609 (784)
Q Consensus 534 ~~-~~-~~~gll~~~~k~iIl~vGRL~~~Kgi~~LieA~~~l~~~~~--~v~LvIVG~g~~~~s~d~ee~~~~~~l~~li 609 (784)
.. .. +....+.++++|+|+++||+.+.||++.|++|++.+++..+ ++. +|+|++++..........+...+.+++
T Consensus 463 ~~~~~~~l~r~~~~pdkpvIL~VGRL~p~KGi~~LIeAf~~L~~l~~~~nL~-LIiG~gdd~d~l~~~~~~~l~~L~~li 541 (1050)
T TIGR02468 463 DPPIWSEIMRFFTNPRKPMILALARPDPKKNITTLVKAFGECRPLRELANLT-LIMGNRDDIDEMSSGSSSVLTSVLKLI 541 (1050)
T ss_pred cchhhHHHHhhcccCCCcEEEEEcCCccccCHHHHHHHHHHhHhhccCCCEE-EEEecCchhhhhhccchHHHHHHHHHH
Confidence 00 00 00111236789999999999999999999999999976433 444 466776431111111224456788999
Q ss_pred HhcCCCCcEEEccCcCCcCChhHHHHHHHcc---ccEEEeCCCCCCCcHHHHHHHHcCCcEEEcCccccccccccCceEE
Q 003947 610 DTYKLNGQFRWISSQMNRVRNGELYRYICDT---KGAFVQPALYEAFGLTVVEAMTCGLPTFATCNGGPAEIIVHGKSGF 686 (784)
Q Consensus 610 ~~l~L~~~V~flG~~~~~v~~~el~~~la~a---advfV~PS~~E~fGltvlEAMA~GlPVIaT~~GG~~EiI~dg~~G~ 686 (784)
+++++.++|.|+| .++.+++..+|+.+ +|+||+||.+|+||++++||||||+|||||+.||+.|+|.++.+|+
T Consensus 542 ~~lgL~g~V~FlG----~v~~edvp~lYr~Ad~s~DVFV~PS~~EgFGLvlLEAMAcGlPVVASdvGG~~EII~~g~nGl 617 (1050)
T TIGR02468 542 DKYDLYGQVAYPK----HHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPMVATKNGGPVDIHRVLDNGL 617 (1050)
T ss_pred HHhCCCCeEEecC----CCCHHHHHHHHHHhhhcCCeeeCCcccCCCCHHHHHHHHhCCCEEEeCCCCcHHHhccCCcEE
Confidence 9999999999999 66778888888752 2799999999999999999999999999999999999999999999
Q ss_pred EECCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHh
Q 003947 687 HIDPYKGDQATGILVDFFEKCKVDPGHWDEISQGGLKRIQEKYTWKIYSERLLNLSGVY 745 (784)
Q Consensus 687 li~p~d~e~lAe~I~~~l~~ll~dp~~~~~m~~~a~~~v~~~ytw~~~a~~ll~ly~~~ 745 (784)
+++|.|++++|++|.+ +++||+.|++|+++|++++ ++|+|+.++++|++.+...
T Consensus 618 LVdP~D~eaLA~AL~~----LL~Dpelr~~m~~~gr~~v-~~FSWe~ia~~yl~~i~~~ 671 (1050)
T TIGR02468 618 LVDPHDQQAIADALLK----LVADKQLWAECRQNGLKNI-HLFSWPEHCKTYLSRIASC 671 (1050)
T ss_pred EECCCCHHHHHHHHHH----HhhCHHHHHHHHHHHHHHH-HHCCHHHHHHHHHHHHHHH
Confidence 9999999999999974 5589999999999999998 6799999999999998864
No 6
>TIGR02472 sucr_P_syn_N sucrose-phosphate synthase, putative, glycosyltransferase domain. This family consists of the N-terminal regions, or in some cases the entirety, of bacterial proteins closely related to plant sucrose-phosphate synthases (SPS). The C-terminal domain (TIGR02471), found with most members of this family, resembles both bona fide plant sucrose-phosphate phosphatases (SPP) and the SPP-like domain of plant SPS. At least two members of this family lack the SPP-like domain, which may have binding or regulatory rather than enzymatic activity by analogy to plant SPS. This enzyme produces sucrose 6-phosphate and UDP from UDP-glucose and D-fructose 6-phosphate, and may be encoded near the gene for fructokinase.
Probab=100.00 E-value=2.1e-51 Score=467.06 Aligned_cols=426 Identities=29% Similarity=0.550 Sum_probs=316.5
Q ss_pred eEEEEEccCccccccC-ccC-CCCcccchhhhHHHHHHHHHHHHHHHHHcCC--CcccceEEEecCCCCCC-CCCcCcce
Q 003947 255 FNVVIFTPHGYFAQDN-VLG-YPDTGGQVVYILDQVRALENEMLLRIKQQGL--DITPRILIITRLLPDAV-GTTCGQRV 329 (784)
Q Consensus 255 mkI~ivs~h~~~~~~~-~lg-~p~tGG~~vyv~d~~raLe~eLa~~L~~~Gh--eV~~~i~VvTr~~~~~~-g~~~~~~~ 329 (784)
+||+++|+||+|+|.+ ++| .|+.||+++|+. +|+++|+++|| +|+ |+|+..+... ++.+....
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~p~~GG~~~~v~--------~La~~L~~~G~~~~V~----v~t~~~~~~~~~~~~~~~~ 68 (439)
T TIGR02472 1 LYLLLLSLHGLIRGHDLELGRDADTGGQTKYVL--------ELARALARRSEVEQVD----LVTRLIKDAKVSPDYAQPI 68 (439)
T ss_pred CeEEEEeCCcCCCCCccccCCCCCCCCcchHHH--------HHHHHHHhCCCCcEEE----EEeccccCcCCCCccCCCe
Confidence 4899999999999998 677 599999999999 66667799997 899 9998755421 12333333
Q ss_pred eeecCcCCeEEEEccCCCCcccccccccccCChhhHHHHHHHHHHHHHHHcCCCceEEEEcCCChhHHHHHHHHhCCCcE
Q 003947 330 EKVYGTKYSDILRVPFRTEEGIVRKWISRFEVWPYLETFTEDVATEIIQELQCKPDLIIGNYSDGNIVASLLAHKLDVTQ 409 (784)
Q Consensus 330 e~v~~~~~v~IlrvP~~~~~~~~~~~isr~~l~~yl~~f~~~~~~~i~~~~~~~pDIIh~~~~~~~lva~llar~~gvp~ 409 (784)
+.. .+|++++|+|+.+. .|.++..+++++..|...+.+.+.+. ..+|||||+|++.+++++.++++..++|+
T Consensus 69 ~~~--~~gv~v~r~~~~~~-----~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~~DvIH~h~~~~~~~~~~~~~~~~~p~ 140 (439)
T TIGR02472 69 ERI--APGARIVRLPFGPR-----RYLRKELLWPYLDELADNLLQHLRQQ-GHLPDLIHAHYADAGYVGARLSRLLGVPL 140 (439)
T ss_pred eEe--CCCcEEEEecCCCC-----CCcChhhhhhhHHHHHHHHHHHHHHc-CCCCCEEEEcchhHHHHHHHHHHHhCCCE
Confidence 322 35799999998653 24455677888887777766655432 34799999999888899999999999999
Q ss_pred EEEecCCcccCCC---CCcchhhhccccccccchhhhhHHHhcccCEEEecChHhHhhccccccccccccccccccceee
Q 003947 410 CTIAHALELTKYP---DSDINWKKLDDKYHFSCQFTADLFAMNRTDFIITSTFQEIAGSKDTVGQYESHTAFSLPGLYRV 486 (784)
Q Consensus 410 V~t~H~l~~~k~~---~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~~~~~~~~~~vgqYe~~~~f~~p~l~~~ 486 (784)
|+|.|+....+.. .....+..+...|++..+...++.+++.+|.||++|.+++.. + +..
T Consensus 141 V~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~s~~~~~~------~------------~~~ 202 (439)
T TIGR02472 141 IFTGHSLGREKRRRLLAAGLKPQQIEKQYNISRRIEAEEETLAHASLVITSTHQEIEE------Q------------YAL 202 (439)
T ss_pred EEecccccchhhhhcccCCCChhhhhhhcchHHHHHHHHHHHHhCCEEEECCHHHHHH------H------------HHh
Confidence 9999986432211 111112222223344444445778899999999999765431 0 111
Q ss_pred ecCCCCCCCceEEecCCCCCCCCCCCcHHHHhhhcchhhhHHhhcCchhhhhhhccccCCCCCEEEEEecccCCCChHHH
Q 003947 487 VNGIDAFDPKFNIVSPGADMTIYFPYMEEKRRLKHFHSEIEELLYSPVENKEHLCVLKDSSKPILFTMARLDRVKNLTGL 566 (784)
Q Consensus 487 ~~gi~~f~~k~~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~~gll~~~~k~iIl~vGRL~~~Kgi~~L 566 (784)
..+++ +.|+.+||||+|.+.|.|........ .. . ...+.++. ++++++|+++||+.+.||++.|
T Consensus 203 ~~~~~--~~ki~vIpnGvd~~~f~~~~~~~~~~-~~----~-------~~~~~~~~--~~~~~~i~~vGrl~~~Kg~~~l 266 (439)
T TIGR02472 203 YDSYQ--PERMQVIPPGVDLSRFYPPQSSEETS-EI----D-------NLLAPFLK--DPEKPPILAISRPDRRKNIPSL 266 (439)
T ss_pred ccCCC--ccceEEECCCcChhhcCCCCccccch-hH----H-------HHHHhhcc--ccCCcEEEEEcCCcccCCHHHH
Confidence 12333 67999999999999987753211100 00 0 00011232 4567899999999999999999
Q ss_pred HHHHHHhHccCCCeEEE-EEeCCCCCCcccHHHHHHHHHHHHHHHhcCCCCcEEEccCcCCcCChhHHHHHHHcc---cc
Q 003947 567 VEWYGKNAKLRELVNLV-VVGGDRRKESKDLEEQAEMKKMYGLIDTYKLNGQFRWISSQMNRVRNGELYRYICDT---KG 642 (784)
Q Consensus 567 ieA~~~l~~~~~~v~Lv-IVG~g~~~~s~d~ee~~~~~~l~~li~~l~L~~~V~flG~~~~~v~~~el~~~la~a---ad 642 (784)
++|++++.+..+..+++ |+|+|++.........+..+++..+++++++.++|+|+| .++.+++..+|+.+ +|
T Consensus 267 i~A~~~l~~~~~~~~l~li~G~g~~~~~l~~~~~~~~~~~~~~~~~~~l~~~V~f~g----~~~~~~~~~~~~~a~~~~D 342 (439)
T TIGR02472 267 VEAYGRSPKLQEMANLVLVLGCRDDIRKMESQQREVLQKVLLLIDRYDLYGKVAYPK----HHRPDDVPELYRLAARSRG 342 (439)
T ss_pred HHHHHhChhhhhhccEEEEeCCccccccccHHHHHHHHHHHHHHHHcCCCceEEecC----CCCHHHHHHHHHHHhhcCC
Confidence 99998754333334454 567665422222222344566788899999999999999 66678899988742 29
Q ss_pred EEEeCCCCCCCcHHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHH
Q 003947 643 AFVQPALYEAFGLTVVEAMTCGLPTFATCNGGPAEIIVHGKSGFHIDPYKGDQATGILVDFFEKCKVDPGHWDEISQGGL 722 (784)
Q Consensus 643 vfV~PS~~E~fGltvlEAMA~GlPVIaT~~GG~~EiI~dg~~G~li~p~d~e~lAe~I~~~l~~ll~dp~~~~~m~~~a~ 722 (784)
+||+||.+|+||++++||||||+|||+|+.||+.|++.++.+|++++|+|++++|++|.+ +++||+.+++|+++|+
T Consensus 343 v~v~pS~~E~fg~~~lEAma~G~PvV~s~~gg~~eiv~~~~~G~lv~~~d~~~la~~i~~----ll~~~~~~~~~~~~a~ 418 (439)
T TIGR02472 343 IFVNPALTEPFGLTLLEAAACGLPIVATDDGGPRDIIANCRNGLLVDVLDLEAIASALED----ALSDSSQWQLWSRNGI 418 (439)
T ss_pred EEecccccCCcccHHHHHHHhCCCEEEeCCCCcHHHhcCCCcEEEeCCCCHHHHHHHHHH----HHhCHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999985 4579999999999999
Q ss_pred HHHHHhCCHHHHHHHHHHHH
Q 003947 723 KRIQEKYTWKIYSERLLNLS 742 (784)
Q Consensus 723 ~~v~~~ytw~~~a~~ll~ly 742 (784)
+++.++|||+.++++++++.
T Consensus 419 ~~~~~~fsw~~~~~~~~~l~ 438 (439)
T TIGR02472 419 EGVRRHYSWDAHVEKYLRIL 438 (439)
T ss_pred HHHHHhCCHHHHHHHHHHHh
Confidence 99999999999999999875
No 7
>PRK00654 glgA glycogen synthase; Provisional
Probab=100.00 E-value=3e-43 Score=403.20 Aligned_cols=427 Identities=17% Similarity=0.219 Sum_probs=289.3
Q ss_pred eEEEEEccCccccccCccCCCCcccchhhhHHHHHHHHHHHHHHHHHcCCCcccceEEEecCCCCCCCCCc-Ccceeee-
Q 003947 255 FNVVIFTPHGYFAQDNVLGYPDTGGQVVYILDQVRALENEMLLRIKQQGLDITPRILIITRLLPDAVGTTC-GQRVEKV- 332 (784)
Q Consensus 255 mkI~ivs~h~~~~~~~~lg~p~tGG~~vyv~d~~raLe~eLa~~L~~~GheV~~~i~VvTr~~~~~~g~~~-~~~~e~v- 332 (784)
|||++||.+.+|- ..+||+..++. .|+++|+++||+|. |+|+.++....... .......
T Consensus 1 m~i~~vs~e~~P~-------~k~GGl~~~v~--------~L~~~L~~~G~~V~----v~~p~y~~~~~~~~~~~~~~~~~ 61 (466)
T PRK00654 1 MKILFVASECAPL-------IKTGGLGDVVG--------ALPKALAALGHDVR----VLLPGYPAIREKLRDAQVVGRLD 61 (466)
T ss_pred CeEEEEEcccccC-------cccCcHHHHHH--------HHHHHHHHCCCcEE----EEecCCcchhhhhcCceEEEEee
Confidence 7999999998743 35899999999 56666799999999 99988754321100 0001111
Q ss_pred --------cCcCCeEEEEccCCCCcccccccccccCChhhH---H---HHHHHHHHHHHHHcCCCceEEEEcCCChhHHH
Q 003947 333 --------YGTKYSDILRVPFRTEEGIVRKWISRFEVWPYL---E---TFTEDVATEIIQELQCKPDLIIGNYSDGNIVA 398 (784)
Q Consensus 333 --------~~~~~v~IlrvP~~~~~~~~~~~isr~~l~~yl---~---~f~~~~~~~i~~~~~~~pDIIh~~~~~~~lva 398 (784)
...+|+++++++... +..+..++.+. . .|...+...+ .....+|||||+|+|.+++++
T Consensus 62 ~~~~~~~~~~~~gv~v~~v~~~~-------~~~~~~~y~~~d~~~r~~~f~~~~~~~~-~~~~~~pDiiH~h~w~~~~~~ 133 (466)
T PRK00654 62 LFTVLFGHLEGDGVPVYLIDAPH-------LFDRPSGYGYPDNGERFAFFSWAAAEFA-EGLDPRPDIVHAHDWHTGLIP 133 (466)
T ss_pred eEEEEEEeEEcCCceEEEEeCHH-------HcCCCCCCCCcChHHHHHHHHHHHHHHH-HhcCCCCceEEECCcHHHHHH
Confidence 112467777776421 12223333332 1 2334444333 333569999999999999999
Q ss_pred HHHHHhC-----CCcEEEEecCCcccCCCCC------cchhhhc-cccccccchhhhhHHHhcccCEEEecChHhHhhcc
Q 003947 399 SLLAHKL-----DVTQCTIAHALELTKYPDS------DINWKKL-DDKYHFSCQFTADLFAMNRTDFIITSTFQEIAGSK 466 (784)
Q Consensus 399 ~llar~~-----gvp~V~t~H~l~~~k~~~s------~~~~~~~-~~~y~~~~~~~~e~~a~~~AD~IIt~S~~~~~~~~ 466 (784)
.++++.. ++|+|+|+|++........ .+.+..+ .....+.......+.+++.||.|||+|+..++.+.
T Consensus 134 ~~l~~~~~~~~~~~~~v~TiH~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vitvS~~~~~ei~ 213 (466)
T PRK00654 134 ALLKEKYWRGYPDIKTVFTIHNLAYQGLFPAEILGELGLPAEAFHLEGLEFYGQISFLKAGLYYADRVTTVSPTYAREIT 213 (466)
T ss_pred HHHHHhhhccCCCCCEEEEcCCCcCCCcCCHHHHHHcCCChHHcCchhhhcCCcccHHHHHHHhcCcCeeeCHHHHHHhc
Confidence 8888663 7999999999854321100 0000000 00111111223345578999999999998776443
Q ss_pred ccccccccccccccccceeeecCCCCCCCceEEecCCCCCCCCCCCcHHHHhhhcchhhhHHhhcCchhhhhhhccccCC
Q 003947 467 DTVGQYESHTAFSLPGLYRVVNGIDAFDPKFNIVSPGADMTIYFPYMEEKRRLKHFHSEIEELLYSPVENKEHLCVLKDS 546 (784)
Q Consensus 467 ~~vgqYe~~~~f~~p~l~~~~~gi~~f~~k~~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~~gll~~~ 546 (784)
... | .+.+.+.+ .....|+.+|+||+|.+.|.|.++.....+--...++...-+....++++|+. ++
T Consensus 214 ~~~--~----~~gl~~~~------~~~~~ki~vI~NGid~~~~~p~~~~~~~~~~~~~~~~~k~~~k~~l~~~~gl~-~~ 280 (466)
T PRK00654 214 TPE--F----GYGLEGLL------RARSGKLSGILNGIDYDIWNPETDPLLAANYSADDLEGKAENKRALQERFGLP-DD 280 (466)
T ss_pred ccc--C----CcChHHHH------HhcccCceEecCCCCccccCCccCcccccccChhhhhchHHHHHHHHHHhCCC-CC
Confidence 210 0 00010000 11256899999999999998864321000000000001111123456678873 34
Q ss_pred CCCEEEEEecccCCCChHHHHHHHHHhHccCCCeEEEEEeCCCCCCcccHHHHHHHHHHHHHHHhcCCCCcEEE-ccCcC
Q 003947 547 SKPILFTMARLDRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYGLIDTYKLNGQFRW-ISSQM 625 (784)
Q Consensus 547 ~k~iIl~vGRL~~~Kgi~~LieA~~~l~~~~~~v~LvIVG~g~~~~s~d~ee~~~~~~l~~li~~l~L~~~V~f-lG~~~ 625 (784)
+.++|+++||+.+.||++.+++|++++.+. +++|+|+|+|+. ...+.+++++++++ +++.+ .|+
T Consensus 281 ~~~~i~~vGRl~~~KG~~~li~a~~~l~~~--~~~lvivG~g~~---------~~~~~l~~l~~~~~--~~v~~~~g~-- 345 (466)
T PRK00654 281 DAPLFAMVSRLTEQKGLDLVLEALPELLEQ--GGQLVLLGTGDP---------ELEEAFRALAARYP--GKVGVQIGY-- 345 (466)
T ss_pred CCcEEEEeeccccccChHHHHHHHHHHHhc--CCEEEEEecCcH---------HHHHHHHHHHHHCC--CcEEEEEeC--
Confidence 689999999999999999999999998763 799999998843 23456778888876 45654 452
Q ss_pred CcCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcCccccccccccC------ceEEEECCCCHHHHHHH
Q 003947 626 NRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCNGGPAEIIVHG------KSGFHIDPYKGDQATGI 699 (784)
Q Consensus 626 ~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMA~GlPVIaT~~GG~~EiI~dg------~~G~li~p~d~e~lAe~ 699 (784)
+.+.+..+++ ++|++|+||.+|+||++++|||+||+|+|+|+.||+.|+|.++ .+|++++|+|+++++++
T Consensus 346 ---~~~~~~~~~~-~aDv~v~PS~~E~~gl~~lEAma~G~p~V~~~~gG~~e~v~~~~~~~~~~~G~lv~~~d~~~la~~ 421 (466)
T PRK00654 346 ---DEALAHRIYA-GADMFLMPSRFEPCGLTQLYALRYGTLPIVRRTGGLADTVIDYNPEDGEATGFVFDDFNAEDLLRA 421 (466)
T ss_pred ---CHHHHHHHHh-hCCEEEeCCCCCCchHHHHHHHHCCCCEEEeCCCCccceeecCCCCCCCCceEEeCCCCHHHHHHH
Confidence 3344567777 5999999999999999999999999999999999999999988 89999999999999999
Q ss_pred HHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Q 003947 700 LVDFFEKCKVDPGHWDEISQGGLKRIQEKYTWKIYSERLLNLSGV 744 (784)
Q Consensus 700 I~~~l~~ll~dp~~~~~m~~~a~~~v~~~ytw~~~a~~ll~ly~~ 744 (784)
|.+++ .+..+++.|.+|++++.+ ++|||+.++++++++|+.
T Consensus 422 i~~~l-~~~~~~~~~~~~~~~~~~---~~fsw~~~a~~~~~lY~~ 462 (466)
T PRK00654 422 LRRAL-ELYRQPPLWRALQRQAMA---QDFSWDKSAEEYLELYRR 462 (466)
T ss_pred HHHHH-HHhcCHHHHHHHHHHHhc---cCCChHHHHHHHHHHHHH
Confidence 99876 344678889999988863 789999999999999974
No 8
>TIGR03449 mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-inositol-1-phosphate 1-alpha-D-N-acetylglucosaminyltransferase. Members of this protein family, found exclusively in the Actinobacteria, are MshA, the glycosyltransferase of mycothiol biosynthesis. Mycothiol replaces glutathione in these species.
Probab=100.00 E-value=3.1e-43 Score=394.24 Aligned_cols=399 Identities=21% Similarity=0.255 Sum_probs=296.7
Q ss_pred EEEEccCccccccCccCCCCcccchhhhHHHHHHHHHHHHHHHHHcCCCcccceEEEecCCCCCCCCCcCcceeeecCcC
Q 003947 257 VVIFTPHGYFAQDNVLGYPDTGGQVVYILDQVRALENEMLLRIKQQGLDITPRILIITRLLPDAVGTTCGQRVEKVYGTK 336 (784)
Q Consensus 257 I~ivs~h~~~~~~~~lg~p~tGG~~vyv~d~~raLe~eLa~~L~~~GheV~~~i~VvTr~~~~~~g~~~~~~~e~v~~~~ 336 (784)
|++++.|+.|.. +++..+.||.++|+. +|+++|+++||+|+ |+|+......+ . .....+
T Consensus 1 ~~~~~~~~~~~~--~~~~~~~GG~e~~v~--------~la~~L~~~G~~V~----v~~~~~~~~~~-----~--~~~~~~ 59 (405)
T TIGR03449 1 VAMISMHTSPLQ--QPGTGDAGGMNVYIL--------ETATELARRGIEVD----IFTRATRPSQP-----P--VVEVAP 59 (405)
T ss_pred CeEEeccCCccc--cCCCcCCCCceehHH--------HHHHHHhhCCCEEE----EEecccCCCCC-----C--ccccCC
Confidence 578888887542 455666799999999 66667799999999 99976432211 1 111224
Q ss_pred CeEEEEccCCCCcccccccccccCChhhHHHHHHHHHHHHHHHcCCCceEEEEcCCChhHHHHHHHHhCCCcEEEEecCC
Q 003947 337 YSDILRVPFRTEEGIVRKWISRFEVWPYLETFTEDVATEIIQELQCKPDLIIGNYSDGNIVASLLAHKLDVTQCTIAHAL 416 (784)
Q Consensus 337 ~v~IlrvP~~~~~~~~~~~isr~~l~~yl~~f~~~~~~~i~~~~~~~pDIIh~~~~~~~lva~llar~~gvp~V~t~H~l 416 (784)
++++.+++..+..+ .+...+..++..|.....+.+......+|||||+|++.+++.+.++++..++|+|+|.|++
T Consensus 60 ~~~v~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Diih~h~~~~~~~~~~~~~~~~~p~v~t~h~~ 134 (405)
T TIGR03449 60 GVRVRNVVAGPYEG-----LDKEDLPTQLCAFTGGVLRAEARHEPGYYDLIHSHYWLSGQVGWLLRDRWGVPLVHTAHTL 134 (405)
T ss_pred CcEEEEecCCCccc-----CCHHHHHHHHHHHHHHHHHHHhhccCCCCCeEEechHHHHHHHHHHHHhcCCCEEEeccch
Confidence 68888887654332 1111122223334444444444433568999999998888888888999999999999987
Q ss_pred cccCCCCCcchhhhccccccccchhhhhHHHhcccCEEEecChHhHhhccccccccccccccccccceeeecCCCCCCCc
Q 003947 417 ELTKYPDSDINWKKLDDKYHFSCQFTADLFAMNRTDFIITSTFQEIAGSKDTVGQYESHTAFSLPGLYRVVNGIDAFDPK 496 (784)
Q Consensus 417 ~~~k~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~~~~~~~~~~vgqYe~~~~f~~p~l~~~~~gi~~f~~k 496 (784)
...+. .++....... .......+...++.+|.||++|+...+...+. .|.+ ..|
T Consensus 135 ~~~~~----~~~~~~~~~~-~~~~~~~e~~~~~~~d~vi~~s~~~~~~~~~~-------------------~~~~--~~k 188 (405)
T TIGR03449 135 AAVKN----AALADGDTPE-PEARRIGEQQLVDNADRLIANTDEEARDLVRH-------------------YDAD--PDR 188 (405)
T ss_pred HHHHH----HhccCCCCCc-hHHHHHHHHHHHHhcCeEEECCHHHHHHHHHH-------------------cCCC--hhh
Confidence 43210 0000000000 00112235567899999999998766522111 1233 568
Q ss_pred eEEecCCCCCCCCCCCcHHHHhhhcchhhhHHhhcCchhhhhhhccccCCCCCEEEEEecccCCCChHHHHHHHHHhHcc
Q 003947 497 FNIVSPGADMTIYFPYMEEKRRLKHFHSEIEELLYSPVENKEHLCVLKDSSKPILFTMARLDRVKNLTGLVEWYGKNAKL 576 (784)
Q Consensus 497 ~~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~~gll~~~~k~iIl~vGRL~~~Kgi~~LieA~~~l~~~ 576 (784)
+.+||||+|.+.|.|...... ++++++ ++++++|+++||+.+.||++.+++|++++.+.
T Consensus 189 i~vi~ngvd~~~~~~~~~~~~-------------------~~~~~~--~~~~~~i~~~G~l~~~K~~~~li~a~~~l~~~ 247 (405)
T TIGR03449 189 IDVVAPGADLERFRPGDRATE-------------------RARLGL--PLDTKVVAFVGRIQPLKAPDVLLRAVAELLDR 247 (405)
T ss_pred EEEECCCcCHHHcCCCcHHHH-------------------HHhcCC--CCCCcEEEEecCCCcccCHHHHHHHHHHHHhh
Confidence 999999999988876532221 234555 56788999999999999999999999999776
Q ss_pred CCC--eEEEEEeCCCCCCcccHHHHHHHHHHHHHHHhcCCCCcEEEccCcCCcCChhHHHHHHHccccEEEeCCCCCCCc
Q 003947 577 REL--VNLVVVGGDRRKESKDLEEQAEMKKMYGLIDTYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFG 654 (784)
Q Consensus 577 ~~~--v~LvIVG~g~~~~s~d~ee~~~~~~l~~li~~l~L~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fG 654 (784)
.++ ++|+|+|+.... . ..+.+.++++++++++.++|+|+| .++.+++..+++. +|++|+||..|+||
T Consensus 248 ~~~~~~~l~ivG~~~~~----g--~~~~~~l~~~~~~~~l~~~v~~~g----~~~~~~~~~~l~~-ad~~v~ps~~E~~g 316 (405)
T TIGR03449 248 DPDRNLRVIVVGGPSGS----G--LATPDALIELAAELGIADRVRFLP----PRPPEELVHVYRA-ADVVAVPSYNESFG 316 (405)
T ss_pred CCCcceEEEEEeCCCCC----c--chHHHHHHHHHHHcCCCceEEECC----CCCHHHHHHHHHh-CCEEEECCCCCCcC
Confidence 666 999999975321 0 123456788899999999999999 6778899999995 99999999999999
Q ss_pred HHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHH
Q 003947 655 LTVVEAMTCGLPTFATCNGGPAEIIVHGKSGFHIDPYKGDQATGILVDFFEKCKVDPGHWDEISQGGLKRIQEKYTWKIY 734 (784)
Q Consensus 655 ltvlEAMA~GlPVIaT~~GG~~EiI~dg~~G~li~p~d~e~lAe~I~~~l~~ll~dp~~~~~m~~~a~~~v~~~ytw~~~ 734 (784)
++++|||+||+|||+|+.||..|++.++.+|++++++|+++++++|.++ ++|++.+++|++++++.+ ++|||+.+
T Consensus 317 ~~~lEAma~G~Pvi~~~~~~~~e~i~~~~~g~~~~~~d~~~la~~i~~~----l~~~~~~~~~~~~~~~~~-~~fsw~~~ 391 (405)
T TIGR03449 317 LVAMEAQACGTPVVAARVGGLPVAVADGETGLLVDGHDPADWADALARL----LDDPRTRIRMGAAAVEHA-AGFSWAAT 391 (405)
T ss_pred hHHHHHHHcCCCEEEecCCCcHhhhccCCceEECCCCCHHHHHHHHHHH----HhCHHHHHHHHHHHHHHH-HhCCHHHH
Confidence 9999999999999999999999999999999999999999999999855 479999999999999987 78999999
Q ss_pred HHHHHHHHHH
Q 003947 735 SERLLNLSGV 744 (784)
Q Consensus 735 a~~ll~ly~~ 744 (784)
+++++++|..
T Consensus 392 ~~~~~~~y~~ 401 (405)
T TIGR03449 392 ADGLLSSYRD 401 (405)
T ss_pred HHHHHHHHHH
Confidence 9999999974
No 9
>TIGR02095 glgA glycogen/starch synthases, ADP-glucose type. This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate.
Probab=100.00 E-value=1.6e-41 Score=389.63 Aligned_cols=435 Identities=17% Similarity=0.206 Sum_probs=293.5
Q ss_pred eEEEEEccCccccccCccCCCCcccchhhhHHHHHHHHHHHHHHHHHcCCCcccceEEEecCCCCCCCCCcCc-----ce
Q 003947 255 FNVVIFTPHGYFAQDNVLGYPDTGGQVVYILDQVRALENEMLLRIKQQGLDITPRILIITRLLPDAVGTTCGQ-----RV 329 (784)
Q Consensus 255 mkI~ivs~h~~~~~~~~lg~p~tGG~~vyv~d~~raLe~eLa~~L~~~GheV~~~i~VvTr~~~~~~g~~~~~-----~~ 329 (784)
|||+++|...+|- -.+||+..++- .|+++|+++||+|. |+|+.++......... ..
T Consensus 1 m~i~~vs~E~~P~-------~k~GGl~~~v~--------~L~~aL~~~G~~v~----v~~p~y~~~~~~~~~~~~~~~~~ 61 (473)
T TIGR02095 1 MRVLFVAAEMAPF-------AKTGGLADVVG--------ALPKALAALGHDVR----VLLPAYGCIEDEVDDQVKVVELV 61 (473)
T ss_pred CeEEEEEeccccc-------cCcCcHHHHHH--------HHHHHHHHcCCeEE----EEecCCcChhhhhccCeEEEEEE
Confidence 7999999997742 25899999999 55566699999999 9998876432110000 00
Q ss_pred --------ee----ecCcCCeEEEEccCCC---Ccc-cccccccccCChhhHHHHHHHHHHHHHHHcCCCceEEEEcCCC
Q 003947 330 --------EK----VYGTKYSDILRVPFRT---EEG-IVRKWISRFEVWPYLETFTEDVATEIIQELQCKPDLIIGNYSD 393 (784)
Q Consensus 330 --------e~----v~~~~~v~IlrvP~~~---~~~-~~~~~isr~~l~~yl~~f~~~~~~~i~~~~~~~pDIIh~~~~~ 393 (784)
.. ....+|++++++.... ..+ +... +..+.......|...+...+.. ...+|||||+|+|.
T Consensus 62 ~~~~~~~~~~~~~~~~~~~~v~~~~i~~~~~~~r~~~~y~~--~~~d~~~r~~~f~~a~~~~~~~-~~~~~DiiH~hdw~ 138 (473)
T TIGR02095 62 DLSVGPRTLYVKVFEGVVEGVPVYFIDNPSLFDRPGGIYGD--DYPDNAERFAFFSRAAAELLSG-LGWQPDVVHAHDWH 138 (473)
T ss_pred EEeecCceeEEEEEEEEECCceEEEEECHHHcCCCCCCCCC--CCCCHHHHHHHHHHHHHHHHHh-cCCCCCEEEECCcH
Confidence 00 0112356666654321 000 0000 0001111122344444444433 36799999999999
Q ss_pred hhHHHHHHHHhCC---CcEEEEecCCcccC-CCCCcchh-----hhcc-ccccccchhhhhHHHhcccCEEEecChHhHh
Q 003947 394 GNIVASLLAHKLD---VTQCTIAHALELTK-YPDSDINW-----KKLD-DKYHFSCQFTADLFAMNRTDFIITSTFQEIA 463 (784)
Q Consensus 394 ~~lva~llar~~g---vp~V~t~H~l~~~k-~~~s~~~~-----~~~~-~~y~~~~~~~~e~~a~~~AD~IIt~S~~~~~ 463 (784)
+++++.++++..+ +|.|+|+|++.... ++.....+ ..+. ..+.+...+...+.+++.||.|+|+|+..++
T Consensus 139 ~~~~~~~l~~~~~~~~~~~v~TiH~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~v~tVS~~~~~ 218 (473)
T TIGR02095 139 TALVPALLKAVYRPNPIKTVFTIHNLAYQGVFPADDFSELGLPPEYFHMEGLEFYGRVNFLKGGIVYADRVTTVSPTYAR 218 (473)
T ss_pred HHHHHHHHHhhccCCCCCEEEEcCCCccCCcCCHHHHHHcCCChHHcCchhhhcCCchHHHHHHHHhCCcCeecCHhHHH
Confidence 9999998988776 99999999986322 11111100 0000 0011111223345689999999999998776
Q ss_pred hccccccccccccccccccceeeecCCCCCCCceEEecCCCCCCCCCCCcHHHHhhhcchhhhHHhhcCchhhhhhhccc
Q 003947 464 GSKDTVGQYESHTAFSLPGLYRVVNGIDAFDPKFNIVSPGADMTIYFPYMEEKRRLKHFHSEIEELLYSPVENKEHLCVL 543 (784)
Q Consensus 464 ~~~~~vgqYe~~~~f~~p~l~~~~~gi~~f~~k~~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~~gll 543 (784)
.+.... | .+.+.+.+ .....++.+|+||+|.+.|.|..+......--....+....+....++++|+.
T Consensus 219 ei~~~~--~----~~~l~~~l------~~~~~ki~~I~NGid~~~~~p~~~~~~~~~~~~~~~~~k~~~k~~l~~~~gl~ 286 (473)
T TIGR02095 219 EILTPE--F----GYGLDGVL------KARSGKLRGILNGIDTEVWNPATDPYLKANYSADDLAGKAENKEALQEELGLP 286 (473)
T ss_pred HhcCCc--C----CccchhHH------HhcCCCeEEEeCCCCccccCCCCCcccccCcCccchhhhhhhHHHHHHHcCCC
Confidence 433210 0 00111100 11256999999999999998854321000000000001111223456778885
Q ss_pred cCCCCCEEEEEecccCCCChHHHHHHHHHhHccCCCeEEEEEeCCCCCCcccHHHHHHHHHHHHHHHhcCCCCcEEEccC
Q 003947 544 KDSSKPILFTMARLDRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYGLIDTYKLNGQFRWISS 623 (784)
Q Consensus 544 ~~~~k~iIl~vGRL~~~Kgi~~LieA~~~l~~~~~~v~LvIVG~g~~~~s~d~ee~~~~~~l~~li~~l~L~~~V~flG~ 623 (784)
.++++++|+++||+.+.||++.+++|+.++.+. +++|+|+|+|+. ...+.+++++++++ +++.+.+
T Consensus 287 ~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~--~~~lvi~G~g~~---------~~~~~l~~~~~~~~--~~v~~~~- 352 (473)
T TIGR02095 287 VDDDVPLFGVISRLTQQKGVDLLLAALPELLEL--GGQLVVLGTGDP---------ELEEALRELAERYP--GNVRVII- 352 (473)
T ss_pred ccCCCCEEEEEecCccccChHHHHHHHHHHHHc--CcEEEEECCCCH---------HHHHHHHHHHHHCC--CcEEEEE-
Confidence 445889999999999999999999999998763 599999999842 23356677777654 5788877
Q ss_pred cCCcCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcCccccccccccC------ceEEEECCCCHHHHH
Q 003947 624 QMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCNGGPAEIIVHG------KSGFHIDPYKGDQAT 697 (784)
Q Consensus 624 ~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMA~GlPVIaT~~GG~~EiI~dg------~~G~li~p~d~e~lA 697 (784)
..+.+++..+++. +|++|+||.+|+||++++|||+||+|+|+|+.||+.|+|.++ .+|+++++.|+++++
T Consensus 353 ---~~~~~~~~~~~~~-aDv~l~pS~~E~~gl~~lEAma~G~pvI~s~~gg~~e~v~~~~~~~~~~~G~l~~~~d~~~la 428 (473)
T TIGR02095 353 ---GYDEALAHLIYAG-ADFILMPSRFEPCGLTQLYAMRYGTVPIVRRTGGLADTVVDGDPEAESGTGFLFEEYDPGALL 428 (473)
T ss_pred ---cCCHHHHHHHHHh-CCEEEeCCCcCCcHHHHHHHHHCCCCeEEccCCCccceEecCCCCCCCCceEEeCCCCHHHHH
Confidence 4566677888884 999999999999999999999999999999999999999998 899999999999999
Q ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Q 003947 698 GILVDFFEKCKVDPGHWDEISQGGLKRIQEKYTWKIYSERLLNLSGV 744 (784)
Q Consensus 698 e~I~~~l~~ll~dp~~~~~m~~~a~~~v~~~ytw~~~a~~ll~ly~~ 744 (784)
++|.++++...+||+.|++|++++++ ++|||+.++++|+++|+.
T Consensus 429 ~~i~~~l~~~~~~~~~~~~~~~~~~~---~~fsw~~~a~~~~~~Y~~ 472 (473)
T TIGR02095 429 AALSRALRLYRQDPSLWEALQKNAMS---QDFSWDKSAKQYVELYRS 472 (473)
T ss_pred HHHHHHHHHHhcCHHHHHHHHHHHhc---cCCCcHHHHHHHHHHHHh
Confidence 99998775444499999999998863 689999999999999974
No 10
>PLN02939 transferase, transferring glycosyl groups
Probab=100.00 E-value=7.5e-41 Score=394.85 Aligned_cols=458 Identities=16% Similarity=0.190 Sum_probs=308.8
Q ss_pred HHHhhcCCCcchHhHHhc--CCC--cceEEEEEccCccccccCccCCCCcccchhhhHHHHHHHHHHHHHHHHHcCCCcc
Q 003947 232 LLDLLQAPESSTLETFLG--KIP--RVFNVVIFTPHGYFAQDNVLGYPDTGGQVVYILDQVRALENEMLLRIKQQGLDIT 307 (784)
Q Consensus 232 ~~~~~~~p~~~~~~~~~~--~~p--~~mkI~ivs~h~~~~~~~~lg~p~tGG~~vyv~d~~raLe~eLa~~L~~~GheV~ 307 (784)
-.++.+.+|...+..|+. +.| +.|||++||....|- ..+||..-++- .|.++|+++||+|.
T Consensus 455 ~~~~~~~~~~~~~~~~~~~~~~~~~~~mkILfVasE~aP~-------aKtGGLaDVv~--------sLPkAL~~~GhdV~ 519 (977)
T PLN02939 455 YLSCKGKNEREAVENFLKLTLSGTSSGLHIVHIAAEMAPV-------AKVGGLADVVS--------GLGKALQKKGHLVE 519 (977)
T ss_pred HHHHhcCchHHHHHHHHHhccCCCCCCCEEEEEEcccccc-------cccccHHHHHH--------HHHHHHHHcCCeEE
Confidence 346667777777777664 222 459999999888743 46899999888 55666799999999
Q ss_pred cceEEEecCCCCCCCCCcC-c-----cee-eecC-----------cCCeEEEEccCCCCcccccccccccCChhh-----
Q 003947 308 PRILIITRLLPDAVGTTCG-Q-----RVE-KVYG-----------TKYSDILRVPFRTEEGIVRKWISRFEVWPY----- 364 (784)
Q Consensus 308 ~~i~VvTr~~~~~~g~~~~-~-----~~e-~v~~-----------~~~v~IlrvP~~~~~~~~~~~isr~~l~~y----- 364 (784)
|+++.++........ . ... .+.+ .+|+.++.+...... .+..|..++.+
T Consensus 520 ----VIlP~Y~~i~~~~~~~~~~~~~~~~~~~~g~~~~~~v~~~~~~GV~vyfId~~~~~----~fF~R~~iYg~~Dn~~ 591 (977)
T PLN02939 520 ----IVLPKYDCMQYDQIRNLKVLDVVVESYFDGNLFKNKIWTGTVEGLPVYFIEPQHPS----KFFWRAQYYGEHDDFK 591 (977)
T ss_pred ----EEeCCCcccChhhhhcccccceEEEEeecCceeEEEEEEEEECCeeEEEEecCCch----hccCCCCCCCCccHHH
Confidence 999987643210000 0 000 0000 123333333210000 02223333322
Q ss_pred -HHHHHHHHHHHHHHHcCCCceEEEEcCCChhHHHHHHHH------hCCCcEEEEecCCcccCC-CCCc-----chhhhc
Q 003947 365 -LETFTEDVATEIIQELQCKPDLIIGNYSDGNIVASLLAH------KLDVTQCTIAHALELTKY-PDSD-----INWKKL 431 (784)
Q Consensus 365 -l~~f~~~~~~~i~~~~~~~pDIIh~~~~~~~lva~llar------~~gvp~V~t~H~l~~~k~-~~s~-----~~~~~~ 431 (784)
...|...++..+ .....+|||||+|+|.+++++.++.+ ..++|.|+|+|++..... +... +.+..+
T Consensus 592 RF~~FsrAaLe~~-~~~~~~PDIIH~HDW~TaLV~pll~~~y~~~~~~~~ktVfTIHNl~yQG~f~~~~l~~lGL~~~~l 670 (977)
T PLN02939 592 RFSYFSRAALELL-YQSGKKPDIIHCHDWQTAFVAPLYWDLYAPKGFNSARICFTCHNFEYQGTAPASDLASCGLDVHQL 670 (977)
T ss_pred HHHHHHHHHHHHH-HhcCCCCCEEEECCccHHHHHHHHHHHHhhccCCCCcEEEEeCCCcCCCcCCHHHHHHcCCCHHHc
Confidence 123333344333 33367999999999999987555443 235799999999864331 1111 111111
Q ss_pred cc--cc--cccchhhhhHHHhcccCEEEecChHhHhhccccccccccccccccccceeeecCCCCCCCceEEecCCCCCC
Q 003947 432 DD--KY--HFSCQFTADLFAMNRTDFIITSTFQEIAGSKDTVGQYESHTAFSLPGLYRVVNGIDAFDPKFNIVSPGADMT 507 (784)
Q Consensus 432 ~~--~y--~~~~~~~~e~~a~~~AD~IIt~S~~~~~~~~~~vgqYe~~~~f~~p~l~~~~~gi~~f~~k~~VIpnGvD~~ 507 (784)
.. .. .+..++..-+.++..||.|+|+|+..+..+... | ...+.+. +.....|+.+|+||+|.+
T Consensus 671 ~~~d~le~~~~~~iN~LK~GIv~AD~VtTVSptYA~EI~te---~----G~GL~~~------L~~~~~Kl~gIlNGID~e 737 (977)
T PLN02939 671 DRPDRMQDNAHGRINVVKGAIVYSNIVTTVSPTYAQEVRSE---G----GRGLQDT------LKFHSKKFVGILNGIDTD 737 (977)
T ss_pred cChhhhhhccCCchHHHHHHHHhCCeeEeeeHHHHHHHHHH---h----ccchHHH------hccccCCceEEecceehh
Confidence 00 00 011111122335667999999999988754331 1 0111111 122367999999999999
Q ss_pred CCCCCcHHHHhhhcchhhhHHhhcCchhhhhhhccccC-CCCCEEEEEecccCCCChHHHHHHHHHhHccCCCeEEEEEe
Q 003947 508 IYFPYMEEKRRLKHFHSEIEELLYSPVENKEHLCVLKD-SSKPILFTMARLDRVKNLTGLVEWYGKNAKLRELVNLVVVG 586 (784)
Q Consensus 508 ~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~~gll~~-~~k~iIl~vGRL~~~Kgi~~LieA~~~l~~~~~~v~LvIVG 586 (784)
.|.|.++..-..+--...++-..-+....++++|+..+ ++.|+|+++||+.+.||++.+++|+..+.+ ++++|+|+|
T Consensus 738 ~wnPatD~~L~~~Ys~~dl~GK~~nK~aLRkelGL~~~d~d~pLIg~VGRL~~QKGiDlLleA~~~Ll~--~dvqLVIvG 815 (977)
T PLN02939 738 TWNPSTDRFLKVQYNANDLQGKAANKAALRKQLGLSSADASQPLVGCITRLVPQKGVHLIRHAIYKTAE--LGGQFVLLG 815 (977)
T ss_pred hcCCccccccccccChhhhhhhhhhhHHHHHHhCCCcccccceEEEEeecCCcccChHHHHHHHHHHhh--cCCEEEEEe
Confidence 99987542100000001111122234566788998432 467999999999999999999999988765 479999999
Q ss_pred CCCCCCcccHHHHHHHHHHHHHHHhcCCCCcEEEccCcCCcCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCc
Q 003947 587 GDRRKESKDLEEQAEMKKMYGLIDTYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLP 666 (784)
Q Consensus 587 ~g~~~~s~d~ee~~~~~~l~~li~~l~L~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMA~GlP 666 (784)
+|+.. ...+.++.+++++++.++|.|+| ..+......+|+ ++|+||+||.+|+||++++|||+||+|
T Consensus 816 dGp~~--------~~e~eL~~La~~l~l~drV~FlG----~~de~lah~IYA-aADIFLmPSr~EPfGLvqLEAMAyGtP 882 (977)
T PLN02939 816 SSPVP--------HIQREFEGIADQFQSNNNIRLIL----KYDEALSHSIYA-ASDMFIIPSMFEPCGLTQMIAMRYGSV 882 (977)
T ss_pred CCCcH--------HHHHHHHHHHHHcCCCCeEEEEe----ccCHHHHHHHHH-hCCEEEECCCccCCcHHHHHHHHCCCC
Confidence 99641 23466888999999999999999 455556678888 499999999999999999999999999
Q ss_pred EEEcCcccccccccc---------CceEEEECCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHH
Q 003947 667 TFATCNGGPAEIIVH---------GKSGFHIDPYKGDQATGILVDFFEKCKVDPGHWDEISQGGLKRIQEKYTWKIYSER 737 (784)
Q Consensus 667 VIaT~~GG~~EiI~d---------g~~G~li~p~d~e~lAe~I~~~l~~ll~dp~~~~~m~~~a~~~v~~~ytw~~~a~~ 737 (784)
+|++++||+.|+|.+ +.+|+++++.|+++++++|.+++..+..||+.|++|++++. .++|||+.++++
T Consensus 883 PVVs~vGGL~DtV~d~d~e~i~~eg~NGfLf~~~D~eaLa~AL~rAL~~~~~dpe~~~~L~~~am---~~dFSWe~~A~q 959 (977)
T PLN02939 883 PIVRKTGGLNDSVFDFDDETIPVELRNGFTFLTPDEQGLNSALERAFNYYKRKPEVWKQLVQKDM---NIDFSWDSSASQ 959 (977)
T ss_pred EEEecCCCCcceeecCCccccccCCCceEEecCCCHHHHHHHHHHHHHHhccCHHHHHHHHHHHH---HhcCCHHHHHHH
Confidence 999999999999975 57999999999999999999888666789999999998764 378999999999
Q ss_pred HHHHHHH
Q 003947 738 LLNLSGV 744 (784)
Q Consensus 738 ll~ly~~ 744 (784)
|+++|+.
T Consensus 960 YeeLY~~ 966 (977)
T PLN02939 960 YEELYQR 966 (977)
T ss_pred HHHHHHH
Confidence 9999985
No 11
>cd03800 GT1_Sucrose_synthase This family is most closely related to the GT1 family of glycosyltransferases. The sucrose-phosphate synthases in this family may be unique to plants and photosynthetic bacteria. This enzyme catalyzes the synthesis of sucrose 6-phosphate from fructose 6-phosphate and uridine 5'-diphosphate-glucose, a key regulatory step of sucrose metabolism. The activity of this enzyme is regulated by phosphorylation and moderated by the concentration of various metabolites and light.
Probab=100.00 E-value=4.3e-41 Score=372.97 Aligned_cols=397 Identities=32% Similarity=0.516 Sum_probs=301.0
Q ss_pred EEEEEccCccccccCccCCCCcccchhhhHHHHHHHHHHHHHHHHHcCCCcccceEEEecCCCCCCCCCcCcceeeecCc
Q 003947 256 NVVIFTPHGYFAQDNVLGYPDTGGQVVYILDQVRALENEMLLRIKQQGLDITPRILIITRLLPDAVGTTCGQRVEKVYGT 335 (784)
Q Consensus 256 kI~ivs~h~~~~~~~~lg~p~tGG~~vyv~d~~raLe~eLa~~L~~~GheV~~~i~VvTr~~~~~~g~~~~~~~e~v~~~ 335 (784)
||+|++.|+.+.. .-|.|+.||.+.++. +|++.|+++||+|+ |+|...+.... ......
T Consensus 1 ~~~~~~~~~~~~~--~~~~~~~GG~~~~~~--------~l~~~L~~~g~~V~----v~~~~~~~~~~-------~~~~~~ 59 (398)
T cd03800 1 RIALISLHGSPLA--QPGGADTGGQNVYVL--------ELARALARLGHEVD----IFTRRIDDALP-------PIVELA 59 (398)
T ss_pred CeEEEeccccccc--cCCCCCCCceeehHH--------HHHHHHhccCceEE----EEEecCCcccC-------Cccccc
Confidence 5889999976532 245689999999999 56666799999999 88865432211 001123
Q ss_pred CCeEEEEccCCCCcccccccccccCChhhHHHHHHHHHHHHHHHcCCCceEEEEcCCChhHHHHHHHHhCCCcEEEEecC
Q 003947 336 KYSDILRVPFRTEEGIVRKWISRFEVWPYLETFTEDVATEIIQELQCKPDLIIGNYSDGNIVASLLAHKLDVTQCTIAHA 415 (784)
Q Consensus 336 ~~v~IlrvP~~~~~~~~~~~isr~~l~~yl~~f~~~~~~~i~~~~~~~pDIIh~~~~~~~lva~llar~~gvp~V~t~H~ 415 (784)
.++.+++++..+... .++..+++++..|...+.+.+... ..+||+||+|++..+.++..+++..++|+|++.|+
T Consensus 60 ~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~-~~~~Div~~~~~~~~~~~~~~~~~~~~~~i~~~h~ 133 (398)
T cd03800 60 PGVRVVRVPAGPAEY-----LPKEELWPYLDEFADDLLRFLRRE-GGRPDLIHAHYWDSGLVALLLARRLGIPLVHTFHS 133 (398)
T ss_pred cceEEEecccccccC-----CChhhcchhHHHHHHHHHHHHHhc-CCCccEEEEecCccchHHHHHHhhcCCceEEEeec
Confidence 467888887644321 233345666666766666665543 23899999999888888888999999999999998
Q ss_pred CcccCCCCCcchhhhccccccccchhhhhHHHhcccCEEEecChHhHhhccccccccccccccccccceeeecCCCCCCC
Q 003947 416 LELTKYPDSDINWKKLDDKYHFSCQFTADLFAMNRTDFIITSTFQEIAGSKDTVGQYESHTAFSLPGLYRVVNGIDAFDP 495 (784)
Q Consensus 416 l~~~k~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~~~~~~~~~~vgqYe~~~~f~~p~l~~~~~gi~~f~~ 495 (784)
+...........+. +........++..++.||.|+++|.......... .+.. ..
T Consensus 134 ~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~ad~ii~~s~~~~~~~~~~-------------------~~~~--~~ 187 (398)
T cd03800 134 LGAVKRRHLGAADT-----YEPARRIEAEERLLRAADRVIASTPQEAEELYSL-------------------YGAY--PR 187 (398)
T ss_pred ccccCCcccccccc-----cchhhhhhHHHHHHhhCCEEEEcCHHHHHHHHHH-------------------cccc--cc
Confidence 76433221111111 1122233456678999999999998776522211 1111 44
Q ss_pred ceEEecCCCCCCCCCCCcHHHHhhhcchhhhHHhhcCchhhhhhhccccCCCCCEEEEEecccCCCChHHHHHHHHHhHc
Q 003947 496 KFNIVSPGADMTIYFPYMEEKRRLKHFHSEIEELLYSPVENKEHLCVLKDSSKPILFTMARLDRVKNLTGLVEWYGKNAK 575 (784)
Q Consensus 496 k~~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~~gll~~~~k~iIl~vGRL~~~Kgi~~LieA~~~l~~ 575 (784)
++.+||||+|.+.|.+....... ++.++. .+++++|+++||+++.||++.+++++..+.+
T Consensus 188 ~~~vi~ng~~~~~~~~~~~~~~~------------------~~~~~~--~~~~~~i~~~gr~~~~k~~~~ll~a~~~l~~ 247 (398)
T cd03800 188 RIRVVPPGVDLERFTPYGRAEAR------------------RARLLR--DPDKPRILAVGRLDPRKGIDTLIRAYAELPE 247 (398)
T ss_pred ccEEECCCCCccceecccchhhH------------------HHhhcc--CCCCcEEEEEcccccccCHHHHHHHHHHHHH
Confidence 68999999999888765432211 112232 4567899999999999999999999999988
Q ss_pred cCCCeEEEEEeCCCCCCcccHHHHHHHHHHHHHHHhcCCCCcEEEccCcCCcCChhHHHHHHHccccEEEeCCCCCCCcH
Q 003947 576 LRELVNLVVVGGDRRKESKDLEEQAEMKKMYGLIDTYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGL 655 (784)
Q Consensus 576 ~~~~v~LvIVG~g~~~~s~d~ee~~~~~~l~~li~~l~L~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGl 655 (784)
..++++|+++|++..... ......++.+++++++.++|.|+| .++.+++..+++. +|++++||..|+||+
T Consensus 248 ~~~~~~l~i~G~~~~~~~-----~~~~~~~~~~~~~~~~~~~v~~~g----~~~~~~~~~~~~~-adi~l~ps~~e~~~~ 317 (398)
T cd03800 248 LRERANLVIVGGPRDDIL-----AMDEEELRELARELGVIDRVDFPG----RVSREDLPALYRA-ADVFVNPALYEPFGL 317 (398)
T ss_pred hCCCeEEEEEECCCCcch-----hhhhHHHHHHHHhcCCCceEEEec----cCCHHHHHHHHHh-CCEEEecccccccCc
Confidence 788999999999865211 112234677888899999999999 7778899999995 999999999999999
Q ss_pred HHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHH
Q 003947 656 TVVEAMTCGLPTFATCNGGPAEIIVHGKSGFHIDPYKGDQATGILVDFFEKCKVDPGHWDEISQGGLKRIQEKYTWKIYS 735 (784)
Q Consensus 656 tvlEAMA~GlPVIaT~~GG~~EiI~dg~~G~li~p~d~e~lAe~I~~~l~~ll~dp~~~~~m~~~a~~~v~~~ytw~~~a 735 (784)
+++|||+||+|||+|+.||..|++.++.+|++++++|+++++++|.+ +++|++.+++|++++++++.++|||+.++
T Consensus 318 ~l~Ea~a~G~Pvi~s~~~~~~e~i~~~~~g~~~~~~~~~~l~~~i~~----l~~~~~~~~~~~~~a~~~~~~~~s~~~~~ 393 (398)
T cd03800 318 TALEAMACGLPVVATAVGGPRDIVVDGVTGLLVDPRDPEALAAALRR----LLTDPALRRRLSRAGLRRARARYTWERVA 393 (398)
T ss_pred HHHHHHhcCCCEEECCCCCHHHHccCCCCeEEeCCCCHHHHHHHHHH----HHhCHHHHHHHHHHHHHHHHHhCCHHHHH
Confidence 99999999999999999999999999999999999999999999985 45799999999999999999999999999
Q ss_pred HHHH
Q 003947 736 ERLL 739 (784)
Q Consensus 736 ~~ll 739 (784)
++++
T Consensus 394 ~~~~ 397 (398)
T cd03800 394 ARLL 397 (398)
T ss_pred HHHh
Confidence 9886
No 12
>PLN02316 synthase/transferase
Probab=100.00 E-value=1.8e-40 Score=398.20 Aligned_cols=406 Identities=14% Similarity=0.096 Sum_probs=282.0
Q ss_pred ceEEEEEccCccccccCccCCCCcccchhhhHHHHHHHHHHHHHHHHHcCCCcccceEEEecCCCCCCCCCc-Ccce-ee
Q 003947 254 VFNVVIFTPHGYFAQDNVLGYPDTGGQVVYILDQVRALENEMLLRIKQQGLDITPRILIITRLLPDAVGTTC-GQRV-EK 331 (784)
Q Consensus 254 ~mkI~ivs~h~~~~~~~~lg~p~tGG~~vyv~d~~raLe~eLa~~L~~~GheV~~~i~VvTr~~~~~~g~~~-~~~~-e~ 331 (784)
+|||++||.+..|- -.+||+..++. .|+++|+++||+|. |+|+.++....... .... ..
T Consensus 587 pM~Il~VSsE~~P~-------aKvGGLgDVV~--------sLp~ALa~~Gh~V~----VitP~Y~~i~~~~~~~~~~~~~ 647 (1036)
T PLN02316 587 PMHIVHIAVEMAPI-------AKVGGLGDVVT--------SLSRAVQDLNHNVD----IILPKYDCLNLSHVKDLHYQRS 647 (1036)
T ss_pred CcEEEEEEcccCCC-------CCcCcHHHHHH--------HHHHHHHHcCCEEE----EEecCCcccchhhcccceEEEE
Confidence 49999999998853 35899999999 55666699999999 99998763210000 0000 00
Q ss_pred e-----------cCcCCeEEEEccCCCCcccccccccccCChh------hHHHHHHHHHHHHHHHcCCCceEEEEcCCCh
Q 003947 332 V-----------YGTKYSDILRVPFRTEEGIVRKWISRFEVWP------YLETFTEDVATEIIQELQCKPDLIIGNYSDG 394 (784)
Q Consensus 332 v-----------~~~~~v~IlrvP~~~~~~~~~~~isr~~l~~------yl~~f~~~~~~~i~~~~~~~pDIIh~~~~~~ 394 (784)
+ ...+|+.++.+.... + +..+..++. ....|...++..+. ....+|||||+|+|.+
T Consensus 648 ~~~~~~~~~v~~~~~~GV~vyfl~~~~--~----~F~r~~~Yg~~Dd~~RF~~F~~Aale~l~-~~~~~PDIIHaHDW~t 720 (1036)
T PLN02316 648 YSWGGTEIKVWFGKVEGLSVYFLEPQN--G----MFWAGCVYGCRNDGERFGFFCHAALEFLL-QSGFHPDIIHCHDWSS 720 (1036)
T ss_pred eccCCEEEEEEEEEECCcEEEEEeccc--c----ccCCCCCCCchhHHHHHHHHHHHHHHHHH-hcCCCCCEEEECCChH
Confidence 0 011245555543211 1 111222222 12234444444433 3356899999999999
Q ss_pred hHHHHHHHHh------CCCcEEEEecCCcccCCCCCcchhhhccccccccchhhhhHHHhcccCEEEecChHhHhhcccc
Q 003947 395 NIVASLLAHK------LDVTQCTIAHALELTKYPDSDINWKKLDDKYHFSCQFTADLFAMNRTDFIITSTFQEIAGSKDT 468 (784)
Q Consensus 395 ~lva~llar~------~gvp~V~t~H~l~~~k~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~~~~~~~~~~ 468 (784)
++++.++++. .++|+|+|+|++.... ++ -..++..||.|+|+|+..+..+...
T Consensus 721 alva~llk~~~~~~~~~~~p~V~TiHnl~~~~---------------n~------lk~~l~~AD~ViTVS~tya~EI~~~ 779 (1036)
T PLN02316 721 APVAWLFKDHYAHYGLSKARVVFTIHNLEFGA---------------NH------IGKAMAYADKATTVSPTYSREVSGN 779 (1036)
T ss_pred HHHHHHHHHhhhhhccCCCCEEEEeCCcccch---------------hH------HHHHHHHCCEEEeCCHHHHHHHHhc
Confidence 9998888774 3589999999864210 00 1136789999999999877633221
Q ss_pred ccccccccccccccceeeecCCCCCCCceEEecCCCCCCCCCCCcHHHHhhhcchhh-hHHhhcCchhhhhhhccccCCC
Q 003947 469 VGQYESHTAFSLPGLYRVVNGIDAFDPKFNIVSPGADMTIYFPYMEEKRRLKHFHSE-IEELLYSPVENKEHLCVLKDSS 547 (784)
Q Consensus 469 vgqYe~~~~f~~p~l~~~~~gi~~f~~k~~VIpnGvD~~~f~p~~~~~~rl~~~~~~-~~~~l~~~~~~~~~~gll~~~~ 547 (784)
.++.....|+.+|+||||.+.|.|.++......--... .+-..-+....++++|+. +++
T Consensus 780 -------------------~~l~~~~~Kl~vI~NGID~~~w~P~tD~~lp~~y~~~~~~~gK~~~k~~Lr~~lGL~-~~d 839 (1036)
T PLN02316 780 -------------------SAIAPHLYKFHGILNGIDPDIWDPYNDNFIPVPYTSENVVEGKRAAKEALQQRLGLK-QAD 839 (1036)
T ss_pred -------------------cCcccccCCEEEEECCccccccCCcccccccccCCchhhhhhhhhhHHHHHHHhCCC-ccc
Confidence 11221246999999999999998864321000000000 000011123456778873 247
Q ss_pred CCEEEEEecccCCCChHHHHHHHHHhHccCCCeEEEEEeCCCCCCcccHHHHHHHHHHHHHHHhcCC--CCcEEEccCcC
Q 003947 548 KPILFTMARLDRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYGLIDTYKL--NGQFRWISSQM 625 (784)
Q Consensus 548 k~iIl~vGRL~~~Kgi~~LieA~~~l~~~~~~v~LvIVG~g~~~~s~d~ee~~~~~~l~~li~~l~L--~~~V~flG~~~ 625 (784)
.|+|+++|||.+.||++.|++|+.++.+ .+++|+|+|+|++. ...+.+.++++++++ +++|.|.|.
T Consensus 840 ~plVg~VGRL~~qKGvdlLi~Al~~ll~--~~~qlVIvG~Gpd~--------~~e~~l~~La~~Lg~~~~~rV~f~g~-- 907 (1036)
T PLN02316 840 LPLVGIITRLTHQKGIHLIKHAIWRTLE--RNGQVVLLGSAPDP--------RIQNDFVNLANQLHSSHHDRARLCLT-- 907 (1036)
T ss_pred CeEEEEEeccccccCHHHHHHHHHHHhh--cCcEEEEEeCCCCH--------HHHHHHHHHHHHhCccCCCeEEEEec--
Confidence 8999999999999999999999999865 47999999999651 234678888998876 678999873
Q ss_pred CcCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcCccccccccccC-------------ceEEEECCCC
Q 003947 626 NRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCNGGPAEIIVHG-------------KSGFHIDPYK 692 (784)
Q Consensus 626 ~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMA~GlPVIaT~~GG~~EiI~dg-------------~~G~li~p~d 692 (784)
.+......+|+ ++|+||+||.+|+||++++|||+||+|+|++++||++|+|.++ .+||++++.|
T Consensus 908 --~de~lah~iya-aADiflmPS~~EP~GLvqLEAMa~GtppVvs~vGGL~DtV~d~d~~~~~~~~~g~~~tGflf~~~d 984 (1036)
T PLN02316 908 --YDEPLSHLIYA-GADFILVPSIFEPCGLTQLTAMRYGSIPVVRKTGGLFDTVFDVDHDKERAQAQGLEPNGFSFDGAD 984 (1036)
T ss_pred --CCHHHHHHHHH-hCcEEEeCCcccCccHHHHHHHHcCCCeEEEcCCCcHhhccccccccccccccccCCceEEeCCCC
Confidence 22222346777 5999999999999999999999999999999999999999884 6899999999
Q ss_pred HHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Q 003947 693 GDQATGILVDFFEKCKVDPGHWDEISQGGLKRIQEKYTWKIYSERLLNLSGV 744 (784)
Q Consensus 693 ~e~lAe~I~~~l~~ll~dp~~~~~m~~~a~~~v~~~ytw~~~a~~ll~ly~~ 744 (784)
+++++.+|.+++... ++....+++.+++.+.++|||+.++++|+++|+.
T Consensus 985 ~~aLa~AL~raL~~~---~~~~~~~~~~~r~~m~~dFSW~~~A~~Y~~LY~~ 1033 (1036)
T PLN02316 985 AAGVDYALNRAISAW---YDGRDWFNSLCKRVMEQDWSWNRPALDYMELYHS 1033 (1036)
T ss_pred HHHHHHHHHHHHhhh---hhhHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHH
Confidence 999999999776422 3344556777777888899999999999999975
No 13
>PRK10307 putative glycosyl transferase; Provisional
Probab=100.00 E-value=1.9e-40 Score=373.49 Aligned_cols=396 Identities=11% Similarity=0.101 Sum_probs=284.5
Q ss_pred eEEEEEccCccccccCccCCCCcccchhhhHHHHHHHHHHHHHHHHHcCCCcccceEEEecCCCCCCCC---CcCcceee
Q 003947 255 FNVVIFTPHGYFAQDNVLGYPDTGGQVVYILDQVRALENEMLLRIKQQGLDITPRILIITRLLPDAVGT---TCGQRVEK 331 (784)
Q Consensus 255 mkI~ivs~h~~~~~~~~lg~p~tGG~~vyv~d~~raLe~eLa~~L~~~GheV~~~i~VvTr~~~~~~g~---~~~~~~e~ 331 (784)
|||+++|.+++ |+.||.+.++. +|+++|.++||+|+ |+|+......+. .+......
T Consensus 1 mkIlii~~~~~---------P~~~g~~~~~~--------~l~~~L~~~G~~V~----vit~~~~~~~~~~~~~~~~~~~~ 59 (412)
T PRK10307 1 MKILVYGINYA---------PELTGIGKYTG--------EMAEWLAARGHEVR----VITAPPYYPQWRVGEGYSAWRYR 59 (412)
T ss_pred CeEEEEecCCC---------CCccchhhhHH--------HHHHHHHHCCCeEE----EEecCCCCCCCCCCcccccccce
Confidence 79999998876 56789999988 66667799999999 999652111110 01111111
Q ss_pred ecCcCCeEEEEccCCCCcccccccccccCChhhHHHHHHHHHHHHHHHcCCCceEEEEcCCCh--hHHHHHHHHhCCCcE
Q 003947 332 VYGTKYSDILRVPFRTEEGIVRKWISRFEVWPYLETFTEDVATEIIQELQCKPDLIIGNYSDG--NIVASLLAHKLDVTQ 409 (784)
Q Consensus 332 v~~~~~v~IlrvP~~~~~~~~~~~isr~~l~~yl~~f~~~~~~~i~~~~~~~pDIIh~~~~~~--~lva~llar~~gvp~ 409 (784)
....++++++|+|...... ...+. .+..+ ..|.......+.+....+||+||+|.+.. ...+.+++++.++|+
T Consensus 60 ~~~~~~i~v~r~~~~~~~~--~~~~~--~~~~~-~~~~~~~~~~~~~~~~~~~Div~~~~p~~~~~~~~~~~~~~~~~~~ 134 (412)
T PRK10307 60 RESEGGVTVWRCPLYVPKQ--PSGLK--RLLHL-GSFALSSFFPLLAQRRWRPDRVIGVVPTLFCAPGARLLARLSGART 134 (412)
T ss_pred eeecCCeEEEEccccCCCC--ccHHH--HHHHH-HHHHHHHHHHHhhccCCCCCEEEEeCCcHHHHHHHHHHHHhhCCCE
Confidence 1223579999998643210 00000 11111 12333334444433346899999998654 456778889899999
Q ss_pred EEEecCCcccCCCCCcchhhhccccccccchhhhhHHHhcccCEEEecChHhHhhccccccccccccccccccceeeecC
Q 003947 410 CTIAHALELTKYPDSDINWKKLDDKYHFSCQFTADLFAMNRTDFIITSTFQEIAGSKDTVGQYESHTAFSLPGLYRVVNG 489 (784)
Q Consensus 410 V~t~H~l~~~k~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~~~~~~~~~~vgqYe~~~~f~~p~l~~~~~g 489 (784)
++++|+.+.......... +. ....++. ...++.+++.||.||++|+...+..++ .|
T Consensus 135 v~~~~d~~~~~~~~~~~~-~~-~~~~~~~--~~~~~~~~~~ad~ii~~S~~~~~~~~~--------------------~~ 190 (412)
T PRK10307 135 WLHIQDYEVDAAFGLGLL-KG-GKVARLA--TAFERSLLRRFDNVSTISRSMMNKARE--------------------KG 190 (412)
T ss_pred EEEeccCCHHHHHHhCCc-cC-cHHHHHH--HHHHHHHHhhCCEEEecCHHHHHHHHH--------------------cC
Confidence 999998653211000000 00 0000111 124667899999999999887763211 23
Q ss_pred CCCCCCceEEecCCCCCCCCCCCcHHHHhhhcchhhhHHhhcCchhhhhhhccccCCCCCEEEEEecccCCCChHHHHHH
Q 003947 490 IDAFDPKFNIVSPGADMTIYFPYMEEKRRLKHFHSEIEELLYSPVENKEHLCVLKDSSKPILFTMARLDRVKNLTGLVEW 569 (784)
Q Consensus 490 i~~f~~k~~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~~gll~~~~k~iIl~vGRL~~~Kgi~~LieA 569 (784)
++ ..++.+||||+|.+.|.|...... ...++.+|+ ++++++|+|+||+.+.||++.|++|
T Consensus 191 ~~--~~~i~vi~ngvd~~~~~~~~~~~~----------------~~~~~~~~~--~~~~~~i~~~G~l~~~kg~~~li~a 250 (412)
T PRK10307 191 VA--AEKVIFFPNWSEVARFQPVADADV----------------DALRAQLGL--PDGKKIVLYSGNIGEKQGLELVIDA 250 (412)
T ss_pred CC--cccEEEECCCcCHhhcCCCCccch----------------HHHHHHcCC--CCCCEEEEEcCccccccCHHHHHHH
Confidence 33 668999999999988876532110 012244565 5677899999999999999999999
Q ss_pred HHHhHccCCCeEEEEEeCCCCCCcccHHHHHHHHHHHHHHHhcCCCCcEEEccCcCCcCChhHHHHHHHccccEEEeCCC
Q 003947 570 YGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYGLIDTYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPAL 649 (784)
Q Consensus 570 ~~~l~~~~~~v~LvIVG~g~~~~s~d~ee~~~~~~l~~li~~l~L~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~ 649 (784)
++++.+ .++++|+|+|+|+. .+.++++++++++. +|+|+| .++.+++..+++. +|++|+||.
T Consensus 251 ~~~l~~-~~~~~l~ivG~g~~-----------~~~l~~~~~~~~l~-~v~f~G----~~~~~~~~~~~~~-aDi~v~ps~ 312 (412)
T PRK10307 251 ARRLRD-RPDLIFVICGQGGG-----------KARLEKMAQCRGLP-NVHFLP----LQPYDRLPALLKM-ADCHLLPQK 312 (412)
T ss_pred HHHhcc-CCCeEEEEECCChh-----------HHHHHHHHHHcCCC-ceEEeC----CCCHHHHHHHHHh-cCEeEEeec
Confidence 998854 57899999999854 35678889999986 799999 6778899999995 999999999
Q ss_pred CCC----CcHHHHHHHHcCCcEEEcCccc--cccccccCceEEEECCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHH
Q 003947 650 YEA----FGLTVVEAMTCGLPTFATCNGG--PAEIIVHGKSGFHIDPYKGDQATGILVDFFEKCKVDPGHWDEISQGGLK 723 (784)
Q Consensus 650 ~E~----fGltvlEAMA~GlPVIaT~~GG--~~EiI~dg~~G~li~p~d~e~lAe~I~~~l~~ll~dp~~~~~m~~~a~~ 723 (784)
.|+ +|.+++||||||+|||+|+.|| ..+++. .+|++++++|++++|++|.+ +++|++.+++|+++|++
T Consensus 313 ~e~~~~~~p~kl~eama~G~PVi~s~~~g~~~~~~i~--~~G~~~~~~d~~~la~~i~~----l~~~~~~~~~~~~~a~~ 386 (412)
T PRK10307 313 AGAADLVLPSKLTNMLASGRNVVATAEPGTELGQLVE--GIGVCVEPESVEALVAAIAA----LARQALLRPKLGTVARE 386 (412)
T ss_pred cCcccccCcHHHHHHHHcCCCEEEEeCCCchHHHHHh--CCcEEeCCCCHHHHHHHHHH----HHhCHHHHHHHHHHHHH
Confidence 998 5777899999999999998877 468886 58999999999999999974 45799999999999999
Q ss_pred HHHHhCCHHHHHHHHHHHHHH
Q 003947 724 RIQEKYTWKIYSERLLNLSGV 744 (784)
Q Consensus 724 ~v~~~ytw~~~a~~ll~ly~~ 744 (784)
+++++|||+.++++++++|+.
T Consensus 387 ~~~~~fs~~~~~~~~~~~~~~ 407 (412)
T PRK10307 387 YAERTLDKENVLRQFIADIRG 407 (412)
T ss_pred HHHHHcCHHHHHHHHHHHHHH
Confidence 999999999999999999874
No 14
>PRK14098 glycogen synthase; Provisional
Probab=100.00 E-value=1.9e-40 Score=381.34 Aligned_cols=439 Identities=16% Similarity=0.181 Sum_probs=294.6
Q ss_pred CcceEEEEEccCccccccCccCCCCcccchhhhHHHHHHHHHHHHHHHHHcCCCcccceEEEecCCCCCCCCC--cCc--
Q 003947 252 PRVFNVVIFTPHGYFAQDNVLGYPDTGGQVVYILDQVRALENEMLLRIKQQGLDITPRILIITRLLPDAVGTT--CGQ-- 327 (784)
Q Consensus 252 p~~mkI~ivs~h~~~~~~~~lg~p~tGG~~vyv~d~~raLe~eLa~~L~~~GheV~~~i~VvTr~~~~~~g~~--~~~-- 327 (784)
|| |||+++|....|- -.|||..-++- .|.++|+++||+|. |+++.+..-.... ...
T Consensus 4 ~~-~~il~v~~E~~p~-------~k~Ggl~dv~~--------~Lp~al~~~g~~v~----v~~P~y~~~~~~~~~~~~~~ 63 (489)
T PRK14098 4 RN-FKVLYVSGEVSPF-------VRVSALADFMA--------SFPQALEEEGFEAR----IMMPKYGTINDRKFRLHDVL 63 (489)
T ss_pred CC-cEEEEEeecchhh-------cccchHHHHHH--------HHHHHHHHCCCeEE----EEcCCCCchhhhhhccccce
Confidence 55 9999999888743 57899888777 45566799999999 9998875432210 000
Q ss_pred ceeeec--CcCCeEEEEc--cCCCCccc----c--cccccccCChh-------h------HHHHHHHHHHHHHHHcCCCc
Q 003947 328 RVEKVY--GTKYSDILRV--PFRTEEGI----V--RKWISRFEVWP-------Y------LETFTEDVATEIIQELQCKP 384 (784)
Q Consensus 328 ~~e~v~--~~~~v~Ilrv--P~~~~~~~----~--~~~isr~~l~~-------y------l~~f~~~~~~~i~~~~~~~p 384 (784)
....+. -.....+.++ ...+..++ + ..+..|..++. | ...|...+++.+ .....+|
T Consensus 64 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~f~r~~~y~~~~~g~~~~d~~~rf~~f~~a~l~~~-~~~~~~p 142 (489)
T PRK14098 64 RLSDIEVPLKEKTDLLHVKVTALPSSKIQTYFLYNEKYFKRNGLFTDMSLGGDLKGSAEKVIFFNVGVLETL-QRLGWKP 142 (489)
T ss_pred EEEEEEEeecCeeEEEEEEEecccCCCceEEEEeCHHHcCCCCcCCCCccCCCCCcHHHHHHHHHHHHHHHH-HhcCCCC
Confidence 011110 0001122211 00000010 0 11122222221 1 113333344333 3335689
Q ss_pred eEEEEcCCChhHHHHHHHHhC-------CCcEEEEecCCcccCCCCCcch-----hhhccccccccchhhhhHHHhcccC
Q 003947 385 DLIIGNYSDGNIVASLLAHKL-------DVTQCTIAHALELTKYPDSDIN-----WKKLDDKYHFSCQFTADLFAMNRTD 452 (784)
Q Consensus 385 DIIh~~~~~~~lva~llar~~-------gvp~V~t~H~l~~~k~~~s~~~-----~~~~~~~y~~~~~~~~e~~a~~~AD 452 (784)
||||+|+|.+++++.++++.. ++|+|+|+|++........... +........+...+...+.+++.||
T Consensus 143 DiiH~hdw~t~l~~~~l~~~~~~~~~~~~~~~V~TiHn~~~qg~~~~~~~~~~~~~~~~~~~~~~~~~~n~lk~~i~~ad 222 (489)
T PRK14098 143 DIIHCHDWYAGLVPLLLKTVYADHEFFKDIKTVLTIHNVYRQGVLPFKVFQKLLPEEVCSGLHREGDEVNMLYTGVEHAD 222 (489)
T ss_pred CEEEecCcHHHHHHHHHHHHhhhccccCCCCEEEEcCCCcccCCCCHHHHHHhCCHHhhhhhhhcCCcccHHHHHHHhcC
Confidence 999999999999998887654 7999999999754321110000 0000000011112234456889999
Q ss_pred EEEecChHhHhhccccccccccccccccccceeeecCCCCCCCceEEecCCCCCCCCCCCcHHHHhhhcchhhhHHhhcC
Q 003947 453 FIITSTFQEIAGSKDTVGQYESHTAFSLPGLYRVVNGIDAFDPKFNIVSPGADMTIYFPYMEEKRRLKHFHSEIEELLYS 532 (784)
Q Consensus 453 ~IIt~S~~~~~~~~~~vgqYe~~~~f~~p~l~~~~~gi~~f~~k~~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~ 532 (784)
.|+|+|+..++.+.+.. . ..+.+++..+ ....|+.+|+||+|.+.|.|.++...+.+--...++...-+
T Consensus 223 ~VitVS~~~a~ei~~~~-~----~~~gl~~~l~------~~~~kl~~I~NGID~~~~~p~~d~~~~~~~~~~~~~~k~~~ 291 (489)
T PRK14098 223 LLTTTSPRYAEEIAGDG-E----EAFGLDKVLE------ERKMRLHGILNGIDTRQWNPSTDKLIKKRYSIERLDGKLEN 291 (489)
T ss_pred cceeeCHHHHHHhCcCC-C----CCcChHHHHH------hcCCCeeEEeCCccccccCCcccccccccCCcchhhhHHHH
Confidence 99999998887543310 0 0112222211 11568999999999999998654211000000011111112
Q ss_pred chhhhhhhccccCCCCCEEEEEecccCCCChHHHHHHHHHhHccCCCeEEEEEeCCCCCCcccHHHHHHHHHHHHHHHhc
Q 003947 533 PVENKEHLCVLKDSSKPILFTMARLDRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYGLIDTY 612 (784)
Q Consensus 533 ~~~~~~~~gll~~~~k~iIl~vGRL~~~Kgi~~LieA~~~l~~~~~~v~LvIVG~g~~~~s~d~ee~~~~~~l~~li~~l 612 (784)
+...++.+|+..++++|+|+++||+.+.||++.+++|+.++.+ ++++|+|+|+|+. .+.+.++++++++
T Consensus 292 k~~l~~~lgl~~~~~~~~i~~vgRl~~~KG~d~li~a~~~l~~--~~~~lvivG~G~~---------~~~~~l~~l~~~~ 360 (489)
T PRK14098 292 KKALLEEVGLPFDEETPLVGVIINFDDFQGAELLAESLEKLVE--LDIQLVICGSGDK---------EYEKRFQDFAEEH 360 (489)
T ss_pred HHHHHHHhCCCCccCCCEEEEeccccccCcHHHHHHHHHHHHh--cCcEEEEEeCCCH---------HHHHHHHHHHHHC
Confidence 3455667888666788999999999999999999999999875 4799999999853 2346778888877
Q ss_pred CCCCcEEEccCcCCcCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcCcccccccccc----CceEEEE
Q 003947 613 KLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCNGGPAEIIVH----GKSGFHI 688 (784)
Q Consensus 613 ~L~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMA~GlPVIaT~~GG~~EiI~d----g~~G~li 688 (784)
.++|.|+| .++.+++.++++. +|+||+||.+|+||++.+|||+||+|+|+++.||+.|.+.+ +.+|+++
T Consensus 361 --~~~V~~~g----~~~~~~~~~~~a~-aDi~l~PS~~E~~Gl~~lEAma~G~ppVv~~~GGl~d~v~~~~~~~~~G~l~ 433 (489)
T PRK14098 361 --PEQVSVQT----EFTDAFFHLAIAG-LDMLLMPGKIESCGMLQMFAMSYGTIPVAYAGGGIVETIEEVSEDKGSGFIF 433 (489)
T ss_pred --CCCEEEEE----ecCHHHHHHHHHh-CCEEEeCCCCCCchHHHHHHHhCCCCeEEecCCCCceeeecCCCCCCceeEe
Confidence 47899998 5667788899994 99999999999999999999999999999999999998864 6799999
Q ss_pred CCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Q 003947 689 DPYKGDQATGILVDFFEKCKVDPGHWDEISQGGLKRIQEKYTWKIYSERLLNLSGV 744 (784)
Q Consensus 689 ~p~d~e~lAe~I~~~l~~ll~dp~~~~~m~~~a~~~v~~~ytw~~~a~~ll~ly~~ 744 (784)
++.|+++++++|.+++ .+..|++.|.++++++. .++|||+.++++|+++|+.
T Consensus 434 ~~~d~~~la~ai~~~l-~~~~~~~~~~~~~~~~~---~~~fsw~~~a~~y~~lY~~ 485 (489)
T PRK14098 434 HDYTPEALVAKLGEAL-ALYHDEERWEELVLEAM---ERDFSWKNSAEEYAQLYRE 485 (489)
T ss_pred CCCCHHHHHHHHHHHH-HHHcCHHHHHHHHHHHh---cCCCChHHHHHHHHHHHHH
Confidence 9999999999999876 46689999999988764 4789999999999999974
No 15
>cd03796 GT1_PIG-A_like This family is most closely related to the GT1 family of glycosyltransferases. Phosphatidylinositol glycan-class A (PIG-A), an X-linked gene in humans, is necessary for the synthesis of N-acetylglucosaminyl-phosphatidylinositol, a very early intermediate in glycosyl phosphatidylinositol (GPI)-anchor biosynthesis. The GPI-anchor is an important cellular structure that facilitates the attachment of many proteins to cell surfaces. Somatic mutations in PIG-A have been associated with Paroxysmal Nocturnal Hemoglobinuria (PNH), an acquired hematological disorder.
Probab=100.00 E-value=2.6e-40 Score=371.04 Aligned_cols=365 Identities=17% Similarity=0.226 Sum_probs=271.5
Q ss_pred EEEEEccCccccccCccCCCCcccchhhhHHHHHHHHHHHHHHHHHcCCCcccceEEEecCCCCCCCCCcCcceeeecCc
Q 003947 256 NVVIFTPHGYFAQDNVLGYPDTGGQVVYILDQVRALENEMLLRIKQQGLDITPRILIITRLLPDAVGTTCGQRVEKVYGT 335 (784)
Q Consensus 256 kI~ivs~h~~~~~~~~lg~p~tGG~~vyv~d~~raLe~eLa~~L~~~GheV~~~i~VvTr~~~~~~g~~~~~~~e~v~~~ 335 (784)
||+++++..+ |..||.+.++. +|++.|+++||+|. |+|+..+...+. . ...
T Consensus 1 kI~~v~~~~~---------p~~GG~e~~~~--------~la~~L~~~G~~V~----v~~~~~~~~~~~----~----~~~ 51 (398)
T cd03796 1 RICMVSDFFY---------PNLGGVETHIY--------QLSQCLIKRGHKVV----VITHAYGNRVGI----R----YLT 51 (398)
T ss_pred CeeEEeeccc---------cccccHHHHHH--------HHHHHHHHcCCeeE----EEeccCCcCCCc----c----ccc
Confidence 6899987776 56799999999 66666799999999 998764322110 0 112
Q ss_pred CCeEEEEccCCCCcccccccccccCChhhHHHHHHHHHHHHHHHcCCCceEEEEcCCChh--HHHHHHHHhCCCcEEEEe
Q 003947 336 KYSDILRVPFRTEEGIVRKWISRFEVWPYLETFTEDVATEIIQELQCKPDLIIGNYSDGN--IVASLLAHKLDVTQCTIA 413 (784)
Q Consensus 336 ~~v~IlrvP~~~~~~~~~~~isr~~l~~yl~~f~~~~~~~i~~~~~~~pDIIh~~~~~~~--lva~llar~~gvp~V~t~ 413 (784)
.++.+.++|...... ...+..+. .+...+.+.+. +.+|||||+|+..+. ..+.++++..++|+|++.
T Consensus 52 ~~i~v~~~p~~~~~~-------~~~~~~~~-~~~~~l~~~~~---~~~~DiIh~~~~~~~~~~~~~~~~~~~~~~~v~t~ 120 (398)
T cd03796 52 NGLKVYYLPFVVFYN-------QSTLPTFF-GTFPLLRNILI---RERITIVHGHQAFSALAHEALLHARTMGLKTVFTD 120 (398)
T ss_pred CceeEEEecceeccC-------Cccccchh-hhHHHHHHHHH---hcCCCEEEECCCCchHHHHHHHHhhhcCCcEEEEe
Confidence 467888888643211 00111111 11122222222 458999999987653 346777888999999999
Q ss_pred cCCcccCCCCCcchhhhccccccccchhhhhHHHhcccCEEEecChHhHhhccccccccccccccccccceeeecCCCCC
Q 003947 414 HALELTKYPDSDINWKKLDDKYHFSCQFTADLFAMNRTDFIITSTFQEIAGSKDTVGQYESHTAFSLPGLYRVVNGIDAF 493 (784)
Q Consensus 414 H~l~~~k~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~~~~~~~~~~vgqYe~~~~f~~p~l~~~~~gi~~f 493 (784)
|+..... +..... .. ......++++|.+|++|....+.. ....+++
T Consensus 121 h~~~~~~----~~~~~~----~~-----~~~~~~~~~~d~ii~~s~~~~~~~-------------------~~~~~~~-- 166 (398)
T cd03796 121 HSLFGFA----DASSIH----TN-----KLLRFSLADVDHVICVSHTSKENT-------------------VLRASLD-- 166 (398)
T ss_pred ccccccc----chhhHH----hh-----HHHHHhhccCCEEEEecHhHhhHH-------------------HHHhCCC--
Confidence 9864211 000000 00 112346789999999998765411 0112233
Q ss_pred CCceEEecCCCCCCCCCCCcHHHHhhhcchhhhHHhhcCchhhhhhhccccCCCCCEEEEEecccCCCChHHHHHHHHHh
Q 003947 494 DPKFNIVSPGADMTIYFPYMEEKRRLKHFHSEIEELLYSPVENKEHLCVLKDSSKPILFTMARLDRVKNLTGLVEWYGKN 573 (784)
Q Consensus 494 ~~k~~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~~gll~~~~k~iIl~vGRL~~~Kgi~~LieA~~~l 573 (784)
..|+.+||||+|.+.|.|.... .++++++|+++||+.+.||++.+++|+..+
T Consensus 167 ~~k~~vi~ngvd~~~f~~~~~~----------------------------~~~~~~~i~~~grl~~~Kg~~~li~a~~~l 218 (398)
T cd03796 167 PERVSVIPNAVDSSDFTPDPSK----------------------------RDNDKITIVVISRLVYRKGIDLLVGIIPEI 218 (398)
T ss_pred hhhEEEEcCccCHHHcCCCccc----------------------------CCCCceEEEEEeccchhcCHHHHHHHHHHH
Confidence 5689999999999887664321 035678999999999999999999999999
Q ss_pred HccCCCeEEEEEeCCCCCCcccHHHHHHHHHHHHHHHhcCCCCcEEEccCcCCcCChhHHHHHHHccccEEEeCCCCCCC
Q 003947 574 AKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYGLIDTYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAF 653 (784)
Q Consensus 574 ~~~~~~v~LvIVG~g~~~~s~d~ee~~~~~~l~~li~~l~L~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~f 653 (784)
.+..++++|+|+|+|+. .+.++++++++++.++|.|+| .++.+++..+++. +|++|+||..|+|
T Consensus 219 ~~~~~~~~l~i~G~g~~-----------~~~l~~~~~~~~l~~~v~~~G----~~~~~~~~~~l~~-ad~~v~pS~~E~~ 282 (398)
T cd03796 219 CKKHPNVRFIIGGDGPK-----------RILLEEMREKYNLQDRVELLG----AVPHERVRDVLVQ-GHIFLNTSLTEAF 282 (398)
T ss_pred HhhCCCEEEEEEeCCch-----------HHHHHHHHHHhCCCCeEEEeC----CCCHHHHHHHHHh-CCEEEeCChhhcc
Confidence 88889999999999853 356788999999999999999 6778899999995 9999999999999
Q ss_pred cHHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHH
Q 003947 654 GLTVVEAMTCGLPTFATCNGGPAEIIVHGKSGFHIDPYKGDQATGILVDFFEKCKVDPGHWDEISQGGLKRIQEKYTWKI 733 (784)
Q Consensus 654 GltvlEAMA~GlPVIaT~~GG~~EiI~dg~~G~li~p~d~e~lAe~I~~~l~~ll~dp~~~~~m~~~a~~~v~~~ytw~~ 733 (784)
|++++||||||+|||+|+.||.+|++.++. +++++ .|+++++++|.+++ .++.....+++++++++.++|||+.
T Consensus 283 g~~~~EAma~G~PVI~s~~gg~~e~i~~~~-~~~~~-~~~~~l~~~l~~~l----~~~~~~~~~~~~~~~~~~~~fs~~~ 356 (398)
T cd03796 283 CIAIVEAASCGLLVVSTRVGGIPEVLPPDM-ILLAE-PDVESIVRKLEEAI----SILRTGKHDPWSFHNRVKKMYSWED 356 (398)
T ss_pred CHHHHHHHHcCCCEEECCCCCchhheeCCc-eeecC-CCHHHHHHHHHHHH----hChhhhhhHHHHHHHHHHhhCCHHH
Confidence 999999999999999999999999998863 44454 48999999998655 5666666788999999999999999
Q ss_pred HHHHHHHHHHH
Q 003947 734 YSERLLNLSGV 744 (784)
Q Consensus 734 ~a~~ll~ly~~ 744 (784)
++++++++|+.
T Consensus 357 ~~~~~~~~y~~ 367 (398)
T cd03796 357 VAKRTEKVYDR 367 (398)
T ss_pred HHHHHHHHHHH
Confidence 99999999975
No 16
>cd03791 GT1_Glycogen_synthase_DULL1_like This family is most closely related to the GT1 family of glycosyltransferases. Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms.
Probab=100.00 E-value=6.1e-40 Score=376.12 Aligned_cols=434 Identities=17% Similarity=0.185 Sum_probs=292.2
Q ss_pred EEEEEccCccccccCccCCCCcccchhhhHHHHHHHHHHHHHHHHHcCCCcccceEEEecCCCCCCCCCcCc--cee---
Q 003947 256 NVVIFTPHGYFAQDNVLGYPDTGGQVVYILDQVRALENEMLLRIKQQGLDITPRILIITRLLPDAVGTTCGQ--RVE--- 330 (784)
Q Consensus 256 kI~ivs~h~~~~~~~~lg~p~tGG~~vyv~d~~raLe~eLa~~L~~~GheV~~~i~VvTr~~~~~~g~~~~~--~~e--- 330 (784)
||++||+..+|- ..+||...++- .|+++|++.||+|. |+|+.++......... ...
T Consensus 1 ~Il~v~~E~~p~-------~k~GGl~~~~~--------~L~~aL~~~G~~V~----Vi~p~y~~~~~~~~~~~~~~~~~~ 61 (476)
T cd03791 1 KVLFVASEVAPF-------AKTGGLGDVVG--------ALPKALAKLGHDVR----VIMPKYGRILDELRGQLLVLRLFG 61 (476)
T ss_pred CEEEEEcccccc-------ccCCcHHHHHH--------HHHHHHHHCCCeEE----EEecCCcchhhHhccCeEEEEEEe
Confidence 699999887643 36899999999 55556699999999 9998866432210000 000
Q ss_pred ------------eecCcCCeEEEEccCCCCcc--cc--cccccccCChhhHHHHHHHHHHHHHHHcCCCceEEEEcCCCh
Q 003947 331 ------------KVYGTKYSDILRVPFRTEEG--IV--RKWISRFEVWPYLETFTEDVATEIIQELQCKPDLIIGNYSDG 394 (784)
Q Consensus 331 ------------~v~~~~~v~IlrvP~~~~~~--~~--~~~isr~~l~~yl~~f~~~~~~~i~~~~~~~pDIIh~~~~~~ 394 (784)
.....+|+.+++++...... .. ..+.....-......|...+...+.. ...+|||||+|.|.+
T Consensus 62 ~~~~~~~~~~~~~~~~~~gv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~l~~-~~~~pDviH~hd~~t 140 (476)
T cd03791 62 VPVGGRPEYVGVFELPVDGVPVYFLDNPDYFDRPGLYDDSGYDYEDNAERFALFSRAALELLRR-LGWKPDIIHCHDWHT 140 (476)
T ss_pred eccCCceeEEEEEEEEeCCceEEEEcChHHcCCCCCCCccCCCCccHHHHHHHHHHHHHHHHHh-cCCCCcEEEECchHH
Confidence 00112356676664322110 00 00000000001112344444444433 367999999999999
Q ss_pred hHHHHHHHHhC------CCcEEEEecCCcccCCCCCc------chh--hhccccccccchhhhhHHHhcccCEEEecChH
Q 003947 395 NIVASLLAHKL------DVTQCTIAHALELTKYPDSD------INW--KKLDDKYHFSCQFTADLFAMNRTDFIITSTFQ 460 (784)
Q Consensus 395 ~lva~llar~~------gvp~V~t~H~l~~~k~~~s~------~~~--~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~~ 460 (784)
++++.+++... ++|+|+|+|++......... ..| ......+.+...+..++.++..||.|+++|+.
T Consensus 141 ~~~~~~l~~~~~~~~~~~~~~v~tiH~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~v~~vS~~ 220 (476)
T cd03791 141 GLVPALLKEKYADPFFKNIKTVFTIHNLAYQGVFPLEALEDLGLPWEELFHIDGLEFYGQVNFLKAGIVYADAVTTVSPT 220 (476)
T ss_pred HHHHHHHHHhhccccCCCCCEEEEeCCCCCCCCCCHHHHHHcCCCccchhhhcccccCCcccHHHHHHHhcCcCeecCHh
Confidence 88888887763 89999999998643311100 000 00001112223345677889999999999988
Q ss_pred hHhhccccccccccccccccccceeeecCCCCCCCceEEecCCCCCCCCCCCcHHHHhhhcchhhhHHhhcCchhhhhhh
Q 003947 461 EIAGSKDTVGQYESHTAFSLPGLYRVVNGIDAFDPKFNIVSPGADMTIYFPYMEEKRRLKHFHSEIEELLYSPVENKEHL 540 (784)
Q Consensus 461 ~~~~~~~~vgqYe~~~~f~~p~l~~~~~gi~~f~~k~~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~~ 540 (784)
.++.+.+..+ .+.+.+. +.....|+.+|+||+|.+.|.|..+......-..........+....++++
T Consensus 221 ~~~~i~~~~~------~~gl~~~------~~~~~~ki~~I~NGid~~~~~p~~~~~~~~~~~~~~~~~~~~~k~~l~~~~ 288 (476)
T cd03791 221 YAREILTPEF------GEGLDGL------LRARAGKLSGILNGIDYDVWNPATDPHLPANYSADDLEGKAENKAALQEEL 288 (476)
T ss_pred HHHHhCCCCC------CcchHHH------HHhccCCeEEEeCCCcCcccCccccchhhhcCCccccccHHHHHHHHHHHc
Confidence 7764332100 0000000 011256999999999999998865432110000000111122234456778
Q ss_pred ccccCCCCCEEEEEecccCCCChHHHHHHHHHhHccCCCeEEEEEeCCCCCCcccHHHHHHHHHHHHHHHhcCCCCcEEE
Q 003947 541 CVLKDSSKPILFTMARLDRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYGLIDTYKLNGQFRW 620 (784)
Q Consensus 541 gll~~~~k~iIl~vGRL~~~Kgi~~LieA~~~l~~~~~~v~LvIVG~g~~~~s~d~ee~~~~~~l~~li~~l~L~~~V~f 620 (784)
|+..++++++|+++||+.+.||++.+++++.++.+. +++|+|+|+|+. ...+.++++++++ .+++.+
T Consensus 289 g~~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~--~~~lvi~G~g~~---------~~~~~~~~~~~~~--~~~v~~ 355 (476)
T cd03791 289 GLPVDPDAPLFGFVGRLTEQKGIDLLLEALPELLEL--GGQLVILGSGDP---------EYEEALRELAARY--PGRVAV 355 (476)
T ss_pred CCCcCCCCCEEEEEeeccccccHHHHHHHHHHHHHc--CcEEEEEecCCH---------HHHHHHHHHHHhC--CCcEEE
Confidence 875457899999999999999999999999998764 499999999843 2345666777665 567887
Q ss_pred ccCcCCcCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcCccccccccccCc------eEEEECCCCHH
Q 003947 621 ISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCNGGPAEIIVHGK------SGFHIDPYKGD 694 (784)
Q Consensus 621 lG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMA~GlPVIaT~~GG~~EiI~dg~------~G~li~p~d~e 694 (784)
++ ..+.+++..+++. +|++++||.+|+||++++|||+||+|||+|+.||+.|+|.++. +|++++|.|++
T Consensus 356 ~~----~~~~~~~~~~~~~-aDv~l~pS~~E~~gl~~lEAma~G~pvI~~~~gg~~e~v~~~~~~~~~~~G~~~~~~~~~ 430 (476)
T cd03791 356 LI----GYDEALAHLIYAG-ADFFLMPSRFEPCGLTQMYAMRYGTVPIVRATGGLADTVIDYNEDTGEGTGFVFEGYNAD 430 (476)
T ss_pred EE----eCCHHHHHHHHHh-CCEEECCCCCCCCcHHHHHHhhCCCCCEECcCCCccceEeCCcCCCCCCCeEEeCCCCHH
Confidence 65 3445566777884 9999999999999999999999999999999999999999988 99999999999
Q ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Q 003947 695 QATGILVDFFEKCKVDPGHWDEISQGGLKRIQEKYTWKIYSERLLNLSG 743 (784)
Q Consensus 695 ~lAe~I~~~l~~ll~dp~~~~~m~~~a~~~v~~~ytw~~~a~~ll~ly~ 743 (784)
+++++|.+++ .+..+++.|.+|++++.+ +.|||+.++++++++|+
T Consensus 431 ~l~~~i~~~l-~~~~~~~~~~~~~~~~~~---~~fsw~~~a~~~~~~y~ 475 (476)
T cd03791 431 ALLAALRRAL-ALYRDPEAWRKLQRNAMA---QDFSWDRSAKEYLELYR 475 (476)
T ss_pred HHHHHHHHHH-HHHcCHHHHHHHHHHHhc---cCCChHHHHHHHHHHHh
Confidence 9999999876 345679999999988865 57999999999999986
No 17
>PRK14099 glycogen synthase; Provisional
Probab=100.00 E-value=2.9e-39 Score=371.09 Aligned_cols=435 Identities=16% Similarity=0.187 Sum_probs=282.7
Q ss_pred ceEEEEEccCccccccCccCCCCcccchhhhHHHHHHHHHHHHHHHHHcCCCcccceEEEecCCCCCCCCCcC-cceeee
Q 003947 254 VFNVVIFTPHGYFAQDNVLGYPDTGGQVVYILDQVRALENEMLLRIKQQGLDITPRILIITRLLPDAVGTTCG-QRVEKV 332 (784)
Q Consensus 254 ~mkI~ivs~h~~~~~~~~lg~p~tGG~~vyv~d~~raLe~eLa~~L~~~GheV~~~i~VvTr~~~~~~g~~~~-~~~e~v 332 (784)
.|||+++|....|- -.|||..-++- .|.++|+++||+|. |+++.+......... .....+
T Consensus 3 ~~~il~v~~E~~p~-------~k~ggl~dv~~--------~lp~~l~~~g~~v~----v~~P~y~~~~~~~~~~~~~~~~ 63 (485)
T PRK14099 3 PLRVLSVASEIFPL-------IKTGGLADVAG--------ALPAALKAHGVEVR----TLVPGYPAVLAGIEDAEQVHSF 63 (485)
T ss_pred CcEEEEEEeccccc-------cCCCcHHHHHH--------HHHHHHHHCCCcEE----EEeCCCcchhhhhcCceEEEEE
Confidence 48999999887743 57999888777 45666799999999 999887543211000 011111
Q ss_pred cCc-C-CeEEEEccCCCCcc--cc--cccccccC-Ch------hh---HH---HHHHHHHHHHHHHc--CCCceEEEEcC
Q 003947 333 YGT-K-YSDILRVPFRTEEG--IV--RKWISRFE-VW------PY---LE---TFTEDVATEIIQEL--QCKPDLIIGNY 391 (784)
Q Consensus 333 ~~~-~-~v~IlrvP~~~~~~--~~--~~~isr~~-l~------~y---l~---~f~~~~~~~i~~~~--~~~pDIIh~~~ 391 (784)
... . .+++....... -. ++ ..+..|.. ++ +| .+ .|...++ ++.... ..+|||||+|+
T Consensus 64 ~~~~~~~~~~~~~~~~~-v~~~~~~~~~~f~r~~~~y~~~~~~~~~d~~~rf~~f~~a~~-~~~~~~~~~~~pDIiH~Hd 141 (485)
T PRK14099 64 PDLFGGPARLLAARAGG-LDLFVLDAPHLYDRPGNPYVGPDGKDWPDNAQRFAALARAAA-AIGQGLVPGFVPDIVHAHD 141 (485)
T ss_pred eeeCCceEEEEEEEeCC-ceEEEEeChHhhCCCCCCCCCccCCCCCcHHHHHHHHHHHHH-HHHhhhccCCCCCEEEECC
Confidence 100 0 12222211100 00 00 11111221 11 11 11 2333233 233221 46899999999
Q ss_pred CChhHHHHHHHH--hCCCcEEEEecCCcccC-CCCCc-----chhhhccc-cccccchhhhhHHHhcccCEEEecChHhH
Q 003947 392 SDGNIVASLLAH--KLDVTQCTIAHALELTK-YPDSD-----INWKKLDD-KYHFSCQFTADLFAMNRTDFIITSTFQEI 462 (784)
Q Consensus 392 ~~~~lva~llar--~~gvp~V~t~H~l~~~k-~~~s~-----~~~~~~~~-~y~~~~~~~~e~~a~~~AD~IIt~S~~~~ 462 (784)
|.+++++.++.. ..++|.|+|+|++.... ++... ..+..+.. ...+.......+.++..||.|+|+|+..+
T Consensus 142 w~~~l~~~~l~~~~~~~~~~V~TiHn~~~qg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~i~~ad~vitVS~~~a 221 (485)
T PRK14099 142 WQAGLAPAYLHYSGRPAPGTVFTIHNLAFQGQFPRELLGALGLPPSAFSLDGVEYYGGIGYLKAGLQLADRITTVSPTYA 221 (485)
T ss_pred cHHHHHHHHHHhCCCCCCCEEEeCCCCCCCCcCCHHHHHHcCCChHHcCchhhhhCCCccHHHHHHHhcCeeeecChhHH
Confidence 999888877763 24689999999985432 11100 01110000 00011111224567899999999998877
Q ss_pred hhccccccccccccccccccceeeecCCCCCCCceEEecCCCCCCCCCCCcHHHHhhhcchhhhHHhhcCchhhhhhhcc
Q 003947 463 AGSKDTVGQYESHTAFSLPGLYRVVNGIDAFDPKFNIVSPGADMTIYFPYMEEKRRLKHFHSEIEELLYSPVENKEHLCV 542 (784)
Q Consensus 463 ~~~~~~vgqYe~~~~f~~p~l~~~~~gi~~f~~k~~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~~gl 542 (784)
+.+.+... .+.+.+.+ .....|+.+|+||+|.+.|.|.++.....+-....++....+....++++|+
T Consensus 222 ~ei~~~~~------g~gl~~~l------~~~~~ki~vI~NGID~~~f~p~~~~~~~~~~~~~~~~~k~~~k~~l~~~~gl 289 (485)
T PRK14099 222 LEIQGPEA------GMGLDGLL------RQRADRLSGILNGIDTAVWNPATDELIAATYDVETLAARAANKAALQARFGL 289 (485)
T ss_pred HHHhcccC------CcChHHHH------HhhCCCeEEEecCCchhhccccccchhhhcCChhHHHhHHHhHHHHHHHcCC
Confidence 64332100 00010000 1125689999999999999886542110000000011111122345677888
Q ss_pred ccCCCCCEEEEEecccCCCChHHHHHHHHHhHccCCCeEEEEEeCCCCCCcccHHHHHHHHHHHHHHHhcCCCCcE-EEc
Q 003947 543 LKDSSKPILFTMARLDRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYGLIDTYKLNGQF-RWI 621 (784)
Q Consensus 543 l~~~~k~iIl~vGRL~~~Kgi~~LieA~~~l~~~~~~v~LvIVG~g~~~~s~d~ee~~~~~~l~~li~~l~L~~~V-~fl 621 (784)
..+++.++|+++||+.+.||++.+++|+.++.+ .+++|+|+|+|+. ...+.+++++++++ +++ .|+
T Consensus 290 ~~~~~~~li~~VgRL~~~KG~d~Li~A~~~l~~--~~~~lvivG~G~~---------~~~~~l~~l~~~~~--~~v~~~~ 356 (485)
T PRK14099 290 DPDPDALLLGVISRLSWQKGLDLLLEALPTLLG--EGAQLALLGSGDA---------ELEARFRAAAQAYP--GQIGVVI 356 (485)
T ss_pred CcccCCcEEEEEecCCccccHHHHHHHHHHHHh--cCcEEEEEecCCH---------HHHHHHHHHHHHCC--CCEEEEe
Confidence 544578899999999999999999999998875 4799999999843 23456777777764 455 788
Q ss_pred cCcCCcCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcCccccccccccC---------ceEEEECCCC
Q 003947 622 SSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCNGGPAEIIVHG---------KSGFHIDPYK 692 (784)
Q Consensus 622 G~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMA~GlPVIaT~~GG~~EiI~dg---------~~G~li~p~d 692 (784)
|+ .+++..++..++|+||+||.+|+||++++|||+||+|+|+|+.||+.|+|.++ .+|++++|.|
T Consensus 357 G~------~~~l~~~~~a~aDifv~PS~~E~fGl~~lEAma~G~ppVvs~~GGl~d~V~~~~~~~~~~~~~~G~l~~~~d 430 (485)
T PRK14099 357 GY------DEALAHLIQAGADALLVPSRFEPCGLTQLCALRYGAVPVVARVGGLADTVVDANEMAIATGVATGVQFSPVT 430 (485)
T ss_pred CC------CHHHHHHHHhcCCEEEECCccCCCcHHHHHHHHCCCCcEEeCCCCccceeecccccccccCCCceEEeCCCC
Confidence 84 35788877535999999999999999999999999999999999999999875 6899999999
Q ss_pred HHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Q 003947 693 GDQATGILVDFFEKCKVDPGHWDEISQGGLKRIQEKYTWKIYSERLLNLSGV 744 (784)
Q Consensus 693 ~e~lAe~I~~~l~~ll~dp~~~~~m~~~a~~~v~~~ytw~~~a~~ll~ly~~ 744 (784)
+++++++|.+++ .+++|++.|++|+++++ .++|||+.++++++++|+.
T Consensus 431 ~~~La~ai~~a~-~l~~d~~~~~~l~~~~~---~~~fSw~~~a~~y~~lY~~ 478 (485)
T PRK14099 431 ADALAAALRKTA-ALFADPVAWRRLQRNGM---TTDVSWRNPAQHYAALYRS 478 (485)
T ss_pred HHHHHHHHHHHH-HHhcCHHHHHHHHHHhh---hhcCChHHHHHHHHHHHHH
Confidence 999999998765 36689999999999986 3789999999999999985
No 18
>TIGR02149 glgA_Coryne glycogen synthase, Corynebacterium family. This model describes Corynebacterium glutamicum GlgA and closely related proteins in several other species. This enzyme is required for glycogen biosynthesis and appears to replace the distantly related TIGR02095 family of ADP-glucose type glycogen synthase in Corynebacterium glutamicum, Mycobacterium tuberculosis, Bifidobacterium longum, and Streptomyces coelicolor.
Probab=100.00 E-value=4.6e-39 Score=357.36 Aligned_cols=378 Identities=21% Similarity=0.308 Sum_probs=273.7
Q ss_pred eEEEEEccCccccccCccCCCC-cccchhhhHHHHHHHHHHHHHHHHHcCCCcccceEEEecCCCCCCCCCcCcceeeec
Q 003947 255 FNVVIFTPHGYFAQDNVLGYPD-TGGQVVYILDQVRALENEMLLRIKQQGLDITPRILIITRLLPDAVGTTCGQRVEKVY 333 (784)
Q Consensus 255 mkI~ivs~h~~~~~~~~lg~p~-tGG~~vyv~d~~raLe~eLa~~L~~~GheV~~~i~VvTr~~~~~~g~~~~~~~e~v~ 333 (784)
|||++++..++ |+ .||.+.++. +|++.|+++ |+|+ |+|.... . .
T Consensus 1 mkI~~i~~~~~---------p~~~GG~~~~v~--------~l~~~l~~~-~~v~----v~~~~~~---------~----~ 45 (388)
T TIGR02149 1 MKVTVLTREYP---------PNVYGGAGVHVE--------ELTRELARL-MDVD----VRCFGDQ---------R----F 45 (388)
T ss_pred CeeEEEecccC---------ccccccHhHHHH--------HHHHHHHHh-cCee----EEcCCCc---------h----h
Confidence 79999987665 34 499999999 555556766 7777 6664311 1 1
Q ss_pred CcCCeEEEEccCCCCcccccccccccCChhhHHHHHHHHHHHHHHHcCCCceEEEEcCCChhHHHHHHHHhCCCcEEEEe
Q 003947 334 GTKYSDILRVPFRTEEGIVRKWISRFEVWPYLETFTEDVATEIIQELQCKPDLIIGNYSDGNIVASLLAHKLDVTQCTIA 413 (784)
Q Consensus 334 ~~~~v~IlrvP~~~~~~~~~~~isr~~l~~yl~~f~~~~~~~i~~~~~~~pDIIh~~~~~~~lva~llar~~gvp~V~t~ 413 (784)
..+++.+.+++..... ......+..+..++. ......+||+||+|.+.+++.+.++++..++|+|.+.
T Consensus 46 ~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~---~~~~~~~~divh~~~~~~~~~~~~~~~~~~~p~v~~~ 113 (388)
T TIGR02149 46 DSEGLTVKGYRPWSEL---------KEANKALGTFSVDLA---MANDPVDADVVHSHTWYTFLAGHLAKKLYDKPLVVTA 113 (388)
T ss_pred cCCCeEEEEecChhhc---------cchhhhhhhhhHHHH---HhhCCCCCCeEeecchhhhhHHHHHHHhcCCCEEEEe
Confidence 1235677766542211 111112222222221 1111347999999998887778878888899999999
Q ss_pred cCCcccCCCCCcchhhhccccccccchhhhhHHHhcccCEEEecChHhHhhccccccccccccccccccceeeecCCCCC
Q 003947 414 HALELTKYPDSDINWKKLDDKYHFSCQFTADLFAMNRTDFIITSTFQEIAGSKDTVGQYESHTAFSLPGLYRVVNGIDAF 493 (784)
Q Consensus 414 H~l~~~k~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~~~~~~~~~~vgqYe~~~~f~~p~l~~~~~gi~~f 493 (784)
|++........ ......+.+.. ..++..++.+|.||++|+...+.+.+.. .+++
T Consensus 114 h~~~~~~~~~~----~~~~~~~~~~~--~~~~~~~~~ad~vi~~S~~~~~~~~~~~------------------~~~~-- 167 (388)
T TIGR02149 114 HSLEPLRPWKE----EQLGGGYKLSS--WAEKTAIEAADRVIAVSGGMREDILKYY------------------PDLD-- 167 (388)
T ss_pred ecccccccccc----cccccchhHHH--HHHHHHHhhCCEEEEccHHHHHHHHHHc------------------CCCC--
Confidence 99754221000 00111122211 2366788999999999988766322210 1233
Q ss_pred CCceEEecCCCCCCCCCCCcHHHHhhhcchhhhHHhhcCchhhhhhhccccCCCCCEEEEEecccCCCChHHHHHHHHHh
Q 003947 494 DPKFNIVSPGADMTIYFPYMEEKRRLKHFHSEIEELLYSPVENKEHLCVLKDSSKPILFTMARLDRVKNLTGLVEWYGKN 573 (784)
Q Consensus 494 ~~k~~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~~gll~~~~k~iIl~vGRL~~~Kgi~~LieA~~~l 573 (784)
..++.+||||+|.+.|.|...... ++++|+ ++++++|+++||+.+.||++.+++|+.++
T Consensus 168 ~~~i~vi~ng~~~~~~~~~~~~~~-------------------~~~~~~--~~~~~~i~~~Grl~~~Kg~~~li~a~~~l 226 (388)
T TIGR02149 168 PEKVHVIYNGIDTKEYKPDDGNVV-------------------LDRYGI--DRSRPYILFVGRITRQKGVPHLLDAVHYI 226 (388)
T ss_pred cceEEEecCCCChhhcCCCchHHH-------------------HHHhCC--CCCceEEEEEcccccccCHHHHHHHHHHH
Confidence 568999999999988876533221 234565 56788999999999999999999999987
Q ss_pred HccCCCeEEEEEeCCCCCCcccHHHHHHHHHHHHHHHhcCC-CCcEEEccCcCCcCChhHHHHHHHccccEEEeCCCCCC
Q 003947 574 AKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYGLIDTYKL-NGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEA 652 (784)
Q Consensus 574 ~~~~~~v~LvIVG~g~~~~s~d~ee~~~~~~l~~li~~l~L-~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~ 652 (784)
. ++++++++|++++. .+..+.+++.+.+++. .++|.|++ +.++.+++..+++. +|++|+||.+|+
T Consensus 227 ~---~~~~l~i~g~g~~~-------~~~~~~~~~~~~~~~~~~~~v~~~~---~~~~~~~~~~~~~~-aDv~v~ps~~e~ 292 (388)
T TIGR02149 227 P---KDVQVVLCAGAPDT-------PEVAEEVRQAVALLDRNRTGIIWIN---KMLPKEELVELLSN-AEVFVCPSIYEP 292 (388)
T ss_pred h---hcCcEEEEeCCCCc-------HHHHHHHHHHHHHhccccCceEEec---CCCCHHHHHHHHHh-CCEEEeCCccCC
Confidence 5 46899999987641 1234556677777765 35688775 26778999999995 999999999999
Q ss_pred CcHHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCH------HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHH
Q 003947 653 FGLTVVEAMTCGLPTFATCNGGPAEIIVHGKSGFHIDPYKG------DQATGILVDFFEKCKVDPGHWDEISQGGLKRIQ 726 (784)
Q Consensus 653 fGltvlEAMA~GlPVIaT~~GG~~EiI~dg~~G~li~p~d~------e~lAe~I~~~l~~ll~dp~~~~~m~~~a~~~v~ 726 (784)
||++++|||+||+|||+|+.||..|++.++.+|++++++|. ++++++|. ++++||+.+++|++++++++.
T Consensus 293 ~g~~~lEA~a~G~PvI~s~~~~~~e~i~~~~~G~~~~~~~~~~~~~~~~l~~~i~----~l~~~~~~~~~~~~~a~~~~~ 368 (388)
T TIGR02149 293 LGIVNLEAMACGTPVVASATGGIPEVVVDGETGFLVPPDNSDADGFQAELAKAIN----ILLADPELAKKMGIAGRKRAE 368 (388)
T ss_pred CChHHHHHHHcCCCEEEeCCCCHHHHhhCCCceEEcCCCCCcccchHHHHHHHHH----HHHhCHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999988 77777776 455799999999999999999
Q ss_pred HhCCHHHHHHHHHHHHHH
Q 003947 727 EKYTWKIYSERLLNLSGV 744 (784)
Q Consensus 727 ~~ytw~~~a~~ll~ly~~ 744 (784)
++|||+.+++++.++|+.
T Consensus 369 ~~~s~~~~~~~~~~~y~~ 386 (388)
T TIGR02149 369 EEFSWGSIAKKTVEMYRK 386 (388)
T ss_pred HhCCHHHHHHHHHHHHHh
Confidence 999999999999999974
No 19
>PRK15427 colanic acid biosynthesis glycosyltransferase WcaL; Provisional
Probab=100.00 E-value=5.4e-39 Score=361.80 Aligned_cols=281 Identities=17% Similarity=0.263 Sum_probs=230.1
Q ss_pred CCCceEEEEcCCChhHHHHHHHH--hCCCcEEEEecCCcccCCCCCcchhhhccccccccchhhhhHHHhcccCEEEecC
Q 003947 381 QCKPDLIIGNYSDGNIVASLLAH--KLDVTQCTIAHALELTKYPDSDINWKKLDDKYHFSCQFTADLFAMNRTDFIITST 458 (784)
Q Consensus 381 ~~~pDIIh~~~~~~~lva~llar--~~gvp~V~t~H~l~~~k~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S 458 (784)
+.+||+||+|++..+..+..+++ ..+.|.++|+|+..... ......++. .....+++||+|+++|
T Consensus 116 ~~~~diihaH~~~~~~~~~~~~~~~~~~~~~~~t~Hg~d~~~--------~~~~~~~~~-----~~~~~~~~ad~vv~~S 182 (406)
T PRK15427 116 PFVADVFIAHFGPAGVTAAKLRELGVLRGKIATIFHGIDISS--------REVLNHYTP-----EYQQLFRRGDLMLPIS 182 (406)
T ss_pred cCCCCEEEEcCChHHHHHHHHHHhCCCCCCeEEEEccccccc--------chhhhhhhH-----HHHHHHHhCCEEEECC
Confidence 55799999999887777777765 44567789999853211 000011110 1223578999999999
Q ss_pred hHhHhhccccccccccccccccccceeeecCCCCCCCceEEecCCCCCCCCCCCcHHHHhhhcchhhhHHhhcCchhhhh
Q 003947 459 FQEIAGSKDTVGQYESHTAFSLPGLYRVVNGIDAFDPKFNIVSPGADMTIYFPYMEEKRRLKHFHSEIEELLYSPVENKE 538 (784)
Q Consensus 459 ~~~~~~~~~~vgqYe~~~~f~~p~l~~~~~gi~~f~~k~~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~ 538 (784)
+...+.+.+ .|++ ..|+.+||||+|.+.|.+....
T Consensus 183 ~~~~~~l~~--------------------~g~~--~~ki~vi~nGvd~~~f~~~~~~----------------------- 217 (406)
T PRK15427 183 DLWAGRLQK--------------------MGCP--PEKIAVSRMGVDMTRFSPRPVK----------------------- 217 (406)
T ss_pred HHHHHHHHH--------------------cCCC--HHHEEEcCCCCCHHHcCCCccc-----------------------
Confidence 876652211 2333 6699999999999887653211
Q ss_pred hhccccCCCCCEEEEEecccCCCChHHHHHHHHHhHccCCCeEEEEEeCCCCCCcccHHHHHHHHHHHHHHHhcCCCCcE
Q 003947 539 HLCVLKDSSKPILFTMARLDRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYGLIDTYKLNGQF 618 (784)
Q Consensus 539 ~~gll~~~~k~iIl~vGRL~~~Kgi~~LieA~~~l~~~~~~v~LvIVG~g~~~~s~d~ee~~~~~~l~~li~~l~L~~~V 618 (784)
...++..|+++||+.+.||++.+++|++.+++..++++|+|+|+|+. .++++++++++++.++|
T Consensus 218 -----~~~~~~~il~vGrl~~~Kg~~~ll~a~~~l~~~~~~~~l~ivG~G~~-----------~~~l~~~~~~~~l~~~V 281 (406)
T PRK15427 218 -----APATPLEIISVARLTEKKGLHVAIEACRQLKEQGVAFRYRILGIGPW-----------ERRLRTLIEQYQLEDVV 281 (406)
T ss_pred -----cCCCCeEEEEEeCcchhcCHHHHHHHHHHHHhhCCCEEEEEEECchh-----------HHHHHHHHHHcCCCCeE
Confidence 02345679999999999999999999999988788999999999943 46788999999999999
Q ss_pred EEccCcCCcCChhHHHHHHHccccEEEeCCCC------CCCcHHHHHHHHcCCcEEEcCccccccccccCceEEEECCCC
Q 003947 619 RWISSQMNRVRNGELYRYICDTKGAFVQPALY------EAFGLTVVEAMTCGLPTFATCNGGPAEIIVHGKSGFHIDPYK 692 (784)
Q Consensus 619 ~flG~~~~~v~~~el~~~la~aadvfV~PS~~------E~fGltvlEAMA~GlPVIaT~~GG~~EiI~dg~~G~li~p~d 692 (784)
.|+| .++.+++..+++. +|+||+||.. ||||++++||||||+|||+|+.||++|+|.+|.+|++++|+|
T Consensus 282 ~~~G----~~~~~el~~~l~~-aDv~v~pS~~~~~g~~Eg~p~~llEAma~G~PVI~t~~~g~~E~v~~~~~G~lv~~~d 356 (406)
T PRK15427 282 EMPG----FKPSHEVKAMLDD-ADVFLLPSVTGADGDMEGIPVALMEAMAVGIPVVSTLHSGIPELVEADKSGWLVPEND 356 (406)
T ss_pred EEeC----CCCHHHHHHHHHh-CCEEEECCccCCCCCccCccHHHHHHHhCCCCEEEeCCCCchhhhcCCCceEEeCCCC
Confidence 9999 7778899999995 9999999974 999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhcC-CHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Q 003947 693 GDQATGILVDFFEKCKV-DPGHWDEISQGGLKRIQEKYTWKIYSERLLNLSGV 744 (784)
Q Consensus 693 ~e~lAe~I~~~l~~ll~-dp~~~~~m~~~a~~~v~~~ytw~~~a~~ll~ly~~ 744 (784)
++++|++|.+ +++ ||+.+++|+++|++++.++|+|+.+++++.++|+.
T Consensus 357 ~~~la~ai~~----l~~~d~~~~~~~~~~ar~~v~~~f~~~~~~~~l~~~~~~ 405 (406)
T PRK15427 357 AQALAQRLAA----FSQLDTDELAPVVKRAREKVETDFNQQVINRELASLLQA 405 (406)
T ss_pred HHHHHHHHHH----HHhCCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhh
Confidence 9999999985 446 99999999999999999999999999999999874
No 20
>cd04962 GT1_like_5 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=100.00 E-value=2.7e-38 Score=348.00 Aligned_cols=366 Identities=20% Similarity=0.283 Sum_probs=264.5
Q ss_pred eEEEEEccCccccccCccCCCCcccchhhhHHHHHHHHHHHHHHHHHcCCCcccceEEEecCCCCCCCCCcCcceeeecC
Q 003947 255 FNVVIFTPHGYFAQDNVLGYPDTGGQVVYILDQVRALENEMLLRIKQQGLDITPRILIITRLLPDAVGTTCGQRVEKVYG 334 (784)
Q Consensus 255 mkI~ivs~h~~~~~~~~lg~p~tGG~~vyv~d~~raLe~eLa~~L~~~GheV~~~i~VvTr~~~~~~g~~~~~~~e~v~~ 334 (784)
|||++++. |..||.+.++. +|++.|+++||+|+ |+|...+.... ..
T Consensus 1 mki~~~~~------------p~~gG~~~~~~--------~la~~L~~~G~~v~----v~~~~~~~~~~----------~~ 46 (371)
T cd04962 1 MKIGIVCY------------PTYGGSGVVAT--------ELGKALARRGHEVH----FITSSRPFRLD----------EY 46 (371)
T ss_pred CceeEEEE------------eCCCCccchHH--------HHHHHHHhcCCceE----EEecCCCcchh----------hh
Confidence 69999973 34599999999 66666799999999 88865322100 01
Q ss_pred cCCeEEEEccCCCCcccccccccccCChhhHHHHHHHHHHHHHHHcCCCceEEEEcCCChhHHHHHHHHh----CCCcEE
Q 003947 335 TKYSDILRVPFRTEEGIVRKWISRFEVWPYLETFTEDVATEIIQELQCKPDLIIGNYSDGNIVASLLAHK----LDVTQC 410 (784)
Q Consensus 335 ~~~v~IlrvP~~~~~~~~~~~isr~~l~~yl~~f~~~~~~~i~~~~~~~pDIIh~~~~~~~lva~llar~----~gvp~V 410 (784)
..++.+..++.... + ......+.......+.+.+. ..+||+||+|++.+...+.+++++ .++|++
T Consensus 47 ~~~~~~~~~~~~~~-~-------~~~~~~~~~~~~~~l~~~i~---~~~~divh~~~~~~~~~~~~~~~~~~~~~~~~~i 115 (371)
T cd04962 47 SPNIFFHEVEVPQY-P-------LFQYPPYDLALASKIAEVAK---RYKLDLLHVHYAVPHAVAAYLAREILGKKDLPVV 115 (371)
T ss_pred ccCeEEEEeccccc-c-------hhhcchhHHHHHHHHHHHHh---cCCccEEeecccCCccHHHHHHHHhcCcCCCcEE
Confidence 11233333322111 0 00011111112222333332 458999999987654433333322 379999
Q ss_pred EEecCCcccCCCCCcchhhhccccccccchhhhhHHHhcccCEEEecChHhHhhccccccccccccccccccceeeecCC
Q 003947 411 TIAHALELTKYPDSDINWKKLDDKYHFSCQFTADLFAMNRTDFIITSTFQEIAGSKDTVGQYESHTAFSLPGLYRVVNGI 490 (784)
Q Consensus 411 ~t~H~l~~~k~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~~~~~~~~~~vgqYe~~~~f~~p~l~~~~~gi 490 (784)
++.|+....... ....+. ...+..++.+|.|+++|....+.+.+. +.
T Consensus 116 ~~~h~~~~~~~~--------~~~~~~-----~~~~~~~~~~d~ii~~s~~~~~~~~~~--------------------~~ 162 (371)
T cd04962 116 TTLHGTDITLVG--------QDPSFQ-----PATRFSIEKSDGVTAVSESLRQETYEL--------------------FD 162 (371)
T ss_pred EEEcCCcccccc--------ccccch-----HHHHHHHhhCCEEEEcCHHHHHHHHHh--------------------cC
Confidence 999975321100 011111 123457889999999998776522211 00
Q ss_pred CCCCCceEEecCCCCCCCCCCCcHHHHhhhcchhhhHHhhcCchhhhhhhccccCCCCCEEEEEecccCCCChHHHHHHH
Q 003947 491 DAFDPKFNIVSPGADMTIYFPYMEEKRRLKHFHSEIEELLYSPVENKEHLCVLKDSSKPILFTMARLDRVKNLTGLVEWY 570 (784)
Q Consensus 491 ~~f~~k~~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~~gll~~~~k~iIl~vGRL~~~Kgi~~LieA~ 570 (784)
...++.+||||+|...|.+...... ++.++. .+++++++++||+.+.||++.+++++
T Consensus 163 --~~~~i~vi~n~~~~~~~~~~~~~~~-------------------~~~~~~--~~~~~~il~~g~l~~~K~~~~li~a~ 219 (371)
T cd04962 163 --ITKEIEVIPNFVDEDRFRPKPDEAL-------------------KRRLGA--PEGEKVLIHISNFRPVKRIDDVIRIF 219 (371)
T ss_pred --CcCCEEEecCCcCHhhcCCCchHHH-------------------HHhcCC--CCCCeEEEEecccccccCHHHHHHHH
Confidence 1568999999999887766443221 123444 56778999999999999999999999
Q ss_pred HHhHccCCCeEEEEEeCCCCCCcccHHHHHHHHHHHHHHHhcCCCCcEEEccCcCCcCChhHHHHHHHccccEEEeCCCC
Q 003947 571 GKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYGLIDTYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALY 650 (784)
Q Consensus 571 ~~l~~~~~~v~LvIVG~g~~~~s~d~ee~~~~~~l~~li~~l~L~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~ 650 (784)
..+.+. .+++|+++|+|++ .+.+++.++++++.++|.|+|.+ +++..+++. +|++|+||..
T Consensus 220 ~~l~~~-~~~~l~i~G~g~~-----------~~~~~~~~~~~~~~~~v~~~g~~------~~~~~~~~~-~d~~v~ps~~ 280 (371)
T cd04962 220 AKVRKE-VPARLLLVGDGPE-----------RSPAERLARELGLQDDVLFLGKQ------DHVEELLSI-ADLFLLPSEK 280 (371)
T ss_pred HHHHhc-CCceEEEEcCCcC-----------HHHHHHHHHHcCCCceEEEecCc------ccHHHHHHh-cCEEEeCCCc
Confidence 998764 5689999999865 24577788899999999999943 268888885 9999999999
Q ss_pred CCCcHHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCC
Q 003947 651 EAFGLTVVEAMTCGLPTFATCNGGPAEIIVHGKSGFHIDPYKGDQATGILVDFFEKCKVDPGHWDEISQGGLKRIQEKYT 730 (784)
Q Consensus 651 E~fGltvlEAMA~GlPVIaT~~GG~~EiI~dg~~G~li~p~d~e~lAe~I~~~l~~ll~dp~~~~~m~~~a~~~v~~~yt 730 (784)
|+||++++|||+||+|||+|+.||..|++.++.+|++++++|+++++++|.+ +++||+.+.+|++++++.+.++||
T Consensus 281 E~~~~~~~EAma~g~PvI~s~~~~~~e~i~~~~~G~~~~~~~~~~l~~~i~~----l~~~~~~~~~~~~~~~~~~~~~fs 356 (371)
T cd04962 281 ESFGLAALEAMACGVPVVASNAGGIPEVVKHGETGFLVDVGDVEAMAEYALS----LLEDDELWQEFSRAARNRAAERFD 356 (371)
T ss_pred CCCccHHHHHHHcCCCEEEeCCCCchhhhcCCCceEEcCCCCHHHHHHHHHH----HHhCHHHHHHHHHHHHHHHHHhCC
Confidence 9999999999999999999999999999999999999999999999999974 457999999999999999889999
Q ss_pred HHHHHHHHHHHHHH
Q 003947 731 WKIYSERLLNLSGV 744 (784)
Q Consensus 731 w~~~a~~ll~ly~~ 744 (784)
|+.+++++.++|+.
T Consensus 357 ~~~~~~~~~~~y~~ 370 (371)
T cd04962 357 SERIVPQYEALYRR 370 (371)
T ss_pred HHHHHHHHHHHHHh
Confidence 99999999999874
No 21
>PRK15484 lipopolysaccharide 1,2-N-acetylglucosaminetransferase; Provisional
Probab=100.00 E-value=4.6e-38 Score=351.25 Aligned_cols=374 Identities=17% Similarity=0.200 Sum_probs=274.9
Q ss_pred cceEEEEEccCccccccCccCCCCcccchhhhHHHHHHHHHHHHHHHHHcCCCcccceEEEecCCCCCCCCCcCcceeee
Q 003947 253 RVFNVVIFTPHGYFAQDNVLGYPDTGGQVVYILDQVRALENEMLLRIKQQGLDITPRILIITRLLPDAVGTTCGQRVEKV 332 (784)
Q Consensus 253 ~~mkI~ivs~h~~~~~~~~lg~p~tGG~~vyv~d~~raLe~eLa~~L~~~GheV~~~i~VvTr~~~~~~g~~~~~~~e~v 332 (784)
|+-||++++.--++-|. ...||.+.++. +++++|+. +|+ |+|...+.-. ..+
T Consensus 1 ~~~~~~~~~~~~~~~p~-----~~~g~ve~~~~--------~~~~~l~~---~~~----~~~~~~~~~~------~~~-- 52 (380)
T PRK15484 1 MIDKIIFTVTPIFSIPP-----RGAAAVETWIY--------QVAKRTSI---PNR----IACIKNPGYP------EYT-- 52 (380)
T ss_pred CCceEEEEeccCCCCCC-----ccccHHHHHHH--------HhhhhccC---Cee----EEEecCCCCC------chh--
Confidence 67799999888876542 34699999999 66666743 888 9997754211 111
Q ss_pred cCcCCeEEEEccCCCCcc-cccccccccCChhhHHHHHHHHHHHHHHHcCCCceEEEEcCCChhHHHHHHHHhCCCcEEE
Q 003947 333 YGTKYSDILRVPFRTEEG-IVRKWISRFEVWPYLETFTEDVATEIIQELQCKPDLIIGNYSDGNIVASLLAHKLDVTQCT 411 (784)
Q Consensus 333 ~~~~~v~IlrvP~~~~~~-~~~~~isr~~l~~yl~~f~~~~~~~i~~~~~~~pDIIh~~~~~~~lva~llar~~gvp~V~ 411 (784)
...+|+.+.++++....+ ...+|.+. .-+ .|...+...+......++||||+|... .+...+..+..+.|++.
T Consensus 53 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~----~~~~~~~~~~~~~~~~~~~vi~v~~~~-~~~~~~~~~~~~~~~v~ 126 (380)
T PRK15484 53 KVNDNCDIHYIGFSRIYKRLFQKWTRL-DPL----PYSQRILNIAHKFTITKDSVIVIHNSM-KLYRQIRERAPQAKLVM 126 (380)
T ss_pred hccCCCceEEEEeccccchhhhhhhcc-Cch----hHHHHHHHHHHhcCCCCCcEEEEeCcH-HhHHHHHhhCCCCCEEE
Confidence 112356677776643221 12233332 122 233344444433324579999999855 34555556667789999
Q ss_pred EecCCcccCCCCCcchhhhccccccccchhhhhHHHhcccCEEEecChHhHhhccccccccccccccccccceeeecCCC
Q 003947 412 IAHALELTKYPDSDINWKKLDDKYHFSCQFTADLFAMNRTDFIITSTFQEIAGSKDTVGQYESHTAFSLPGLYRVVNGID 491 (784)
Q Consensus 412 t~H~l~~~k~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~~~~~~~~~~vgqYe~~~~f~~p~l~~~~~gi~ 491 (784)
+.|+.... ..++.++.||++|....+...+ +.+
T Consensus 127 ~~h~~~~~--------------------------~~~~~~~~ii~~S~~~~~~~~~---------------------~~~ 159 (380)
T PRK15484 127 HMHNAFEP--------------------------ELLDKNAKIIVPSQFLKKFYEE---------------------RLP 159 (380)
T ss_pred EEecccCh--------------------------hHhccCCEEEEcCHHHHHHHHh---------------------hCC
Confidence 99964210 1245689999999877652111 112
Q ss_pred CCCCceEEecCCCCCCCCCCCcHHHHhhhcchhhhHHhhcCchhhhhhhccccCCCCCEEEEEecccCCCChHHHHHHHH
Q 003947 492 AFDPKFNIVSPGADMTIYFPYMEEKRRLKHFHSEIEELLYSPVENKEHLCVLKDSSKPILFTMARLDRVKNLTGLVEWYG 571 (784)
Q Consensus 492 ~f~~k~~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~~gll~~~~k~iIl~vGRL~~~Kgi~~LieA~~ 571 (784)
..++.+||||+|.+.|.+...... ++++|+ ++++++|+++||+.+.||++.|++|+.
T Consensus 160 --~~~i~vIpngvd~~~~~~~~~~~~-------------------~~~~~~--~~~~~~il~~Grl~~~Kg~~~Li~A~~ 216 (380)
T PRK15484 160 --NADISIVPNGFCLETYQSNPQPNL-------------------RQQLNI--SPDETVLLYAGRISPDKGILLLMQAFE 216 (380)
T ss_pred --CCCEEEecCCCCHHHcCCcchHHH-------------------HHHhCC--CCCCeEEEEeccCccccCHHHHHHHHH
Confidence 558999999999988876543211 133555 456789999999999999999999999
Q ss_pred HhHccCCCeEEEEEeCCCCCCcccHHHHHHHHHHHHHHHhcCCCCcEEEccCcCCcCChhHHHHHHHccccEEEeCCC-C
Q 003947 572 KNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYGLIDTYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPAL-Y 650 (784)
Q Consensus 572 ~l~~~~~~v~LvIVG~g~~~~s~d~ee~~~~~~l~~li~~l~L~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~-~ 650 (784)
++.+.+|+++|+|+|+++.. ...+...+.+.+++++++++ .+|.|+| .++.+++..+|+. +|++|+||. .
T Consensus 217 ~l~~~~p~~~lvivG~g~~~--~~~~~~~~~~~l~~~~~~l~--~~v~~~G----~~~~~~l~~~~~~-aDv~v~pS~~~ 287 (380)
T PRK15484 217 KLATAHSNLKLVVVGDPTAS--SKGEKAAYQKKVLEAAKRIG--DRCIMLG----GQPPEKMHNYYPL-ADLVVVPSQVE 287 (380)
T ss_pred HHHHhCCCeEEEEEeCCccc--cccchhHHHHHHHHHHHhcC--CcEEEeC----CCCHHHHHHHHHh-CCEEEeCCCCc
Confidence 99888899999999998642 11122344566777777765 5799999 6777899999995 999999997 5
Q ss_pred CCCcHHHHHHHHcCCcEEEcCccccccccccCceEE-EECCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhC
Q 003947 651 EAFGLTVVEAMTCGLPTFATCNGGPAEIIVHGKSGF-HIDPYKGDQATGILVDFFEKCKVDPGHWDEISQGGLKRIQEKY 729 (784)
Q Consensus 651 E~fGltvlEAMA~GlPVIaT~~GG~~EiI~dg~~G~-li~p~d~e~lAe~I~~~l~~ll~dp~~~~~m~~~a~~~v~~~y 729 (784)
|+||++++||||||+|||+|+.||++|++.++.+|+ +++|.|++++|++|.+ +++|++. .+|+++|++++.++|
T Consensus 288 E~f~~~~lEAma~G~PVI~s~~gg~~Eiv~~~~~G~~l~~~~d~~~la~~I~~----ll~d~~~-~~~~~~ar~~~~~~f 362 (380)
T PRK15484 288 EAFCMVAVEAMAAGKPVLASTKGGITEFVLEGITGYHLAEPMTSDSIISDINR----TLADPEL-TQIAEQAKDFVFSKY 362 (380)
T ss_pred cccccHHHHHHHcCCCEEEeCCCCcHhhcccCCceEEEeCCCCHHHHHHHHHH----HHcCHHH-HHHHHHHHHHHHHhC
Confidence 999999999999999999999999999999999999 5688999999999974 5579985 789999999999999
Q ss_pred CHHHHHHHHHHHHHH
Q 003947 730 TWKIYSERLLNLSGV 744 (784)
Q Consensus 730 tw~~~a~~ll~ly~~ 744 (784)
||+.++++++++|+.
T Consensus 363 sw~~~a~~~~~~l~~ 377 (380)
T PRK15484 363 SWEGVTQRFEEQIHN 377 (380)
T ss_pred CHHHHHHHHHHHHHH
Confidence 999999999999875
No 22
>PLN02871 UDP-sulfoquinovose:DAG sulfoquinovosyltransferase
Probab=100.00 E-value=3.8e-38 Score=361.00 Aligned_cols=378 Identities=18% Similarity=0.249 Sum_probs=263.9
Q ss_pred cceEEEEEccCccccccCccCCCCcccchhhhHHHHHHHHHHHHHHHHHcCCCcccceEEEecCCCCCCCCCcCcceeee
Q 003947 253 RVFNVVIFTPHGYFAQDNVLGYPDTGGQVVYILDQVRALENEMLLRIKQQGLDITPRILIITRLLPDAVGTTCGQRVEKV 332 (784)
Q Consensus 253 ~~mkI~ivs~h~~~~~~~~lg~p~tGG~~vyv~d~~raLe~eLa~~L~~~GheV~~~i~VvTr~~~~~~g~~~~~~~e~v 332 (784)
+.|||+++. +..+ -+..||.+.++. +|+++|+++||+|+ |+|...... +.
T Consensus 57 ~~mrI~~~~-~~~~-------~~~~gG~~~~~~--------~l~~~L~~~G~eV~----vlt~~~~~~---------~~- 106 (465)
T PLN02871 57 RPRRIALFV-EPSP-------FSYVSGYKNRFQ--------NFIRYLREMGDEVL----VVTTDEGVP---------QE- 106 (465)
T ss_pred CCceEEEEE-CCcC-------CcccccHHHHHH--------HHHHHHHHCCCeEE----EEecCCCCC---------cc-
Confidence 348999996 3321 145699999998 56666799999999 888653210 00
Q ss_pred cCcCCeEEEEccCCCCcccccccccccCChhhHHHHHHHHHHHHHHHcCCCceEEEEcCCCh-hHHHHHHHHhCCCcEEE
Q 003947 333 YGTKYSDILRVPFRTEEGIVRKWISRFEVWPYLETFTEDVATEIIQELQCKPDLIIGNYSDG-NIVASLLAHKLDVTQCT 411 (784)
Q Consensus 333 ~~~~~v~IlrvP~~~~~~~~~~~isr~~l~~yl~~f~~~~~~~i~~~~~~~pDIIh~~~~~~-~lva~llar~~gvp~V~ 411 (784)
..++.+++++..... . .... .+.+ .+...+.+.+. +.+|||||+|++.. .+.+.++++..++|+|.
T Consensus 107 --~~g~~v~~~~~~~~~-~----~~~~-~~~~--~~~~~l~~~i~---~~kpDiIh~~~~~~~~~~~~~~ak~~~ip~V~ 173 (465)
T PLN02871 107 --FHGAKVIGSWSFPCP-F----YQKV-PLSL--ALSPRIISEVA---RFKPDLIHASSPGIMVFGALFYAKLLCVPLVM 173 (465)
T ss_pred --ccCceeeccCCcCCc-c----CCCc-eeec--cCCHHHHHHHH---hCCCCEEEECCCchhHHHHHHHHHHhCCCEEE
Confidence 123444443321110 0 0000 0000 01112223332 34899999998654 34566678889999999
Q ss_pred EecCCcccCCCCCcchhhhccccccccchhhhhHHHhcccCEEEecChHhHhhccccccccccccccccccceeeecCCC
Q 003947 412 IAHALELTKYPDSDINWKKLDDKYHFSCQFTADLFAMNRTDFIITSTFQEIAGSKDTVGQYESHTAFSLPGLYRVVNGID 491 (784)
Q Consensus 412 t~H~l~~~k~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~~~~~~~~~~vgqYe~~~~f~~p~l~~~~~gi~ 491 (784)
+.|+.......... +... .... ...++..++.+|.|+++|....+.+.+. ...+
T Consensus 174 ~~h~~~~~~~~~~~--~~~~---~~~~--~~~~r~~~~~ad~ii~~S~~~~~~l~~~-------------------~~~~ 227 (465)
T PLN02871 174 SYHTHVPVYIPRYT--FSWL---VKPM--WDIIRFLHRAADLTLVTSPALGKELEAA-------------------GVTA 227 (465)
T ss_pred EEecCchhhhhccc--chhh---HHHH--HHHHHHHHhhCCEEEECCHHHHHHHHHc-------------------CCCC
Confidence 99975432111111 1000 0000 1123456889999999998876632211 1112
Q ss_pred CCCCceEEecCCCCCCCCCCCcHHHHhhhcchhhhHHhhcCchhhhhhhccccCCCCCEEEEEecccCCCChHHHHHHHH
Q 003947 492 AFDPKFNIVSPGADMTIYFPYMEEKRRLKHFHSEIEELLYSPVENKEHLCVLKDSSKPILFTMARLDRVKNLTGLVEWYG 571 (784)
Q Consensus 492 ~f~~k~~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~~gll~~~~k~iIl~vGRL~~~Kgi~~LieA~~ 571 (784)
..++.+||||+|.+.|.|....... ++++.. ..+++++|+|+||+.+.||++.++++++
T Consensus 228 --~~kv~vi~nGvd~~~f~p~~~~~~~------------------~~~~~~-~~~~~~~i~~vGrl~~~K~~~~li~a~~ 286 (465)
T PLN02871 228 --ANRIRVWNKGVDSESFHPRFRSEEM------------------RARLSG-GEPEKPLIVYVGRLGAEKNLDFLKRVME 286 (465)
T ss_pred --cCeEEEeCCccCccccCCccccHHH------------------HHHhcC-CCCCCeEEEEeCCCchhhhHHHHHHHHH
Confidence 5689999999999988775332111 111211 1346789999999999999999999988
Q ss_pred HhHccCCCeEEEEEeCCCCCCcccHHHHHHHHHHHHHHHhcCCCCcEEEccCcCCcCChhHHHHHHHccccEEEeCCCCC
Q 003947 572 KNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYGLIDTYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYE 651 (784)
Q Consensus 572 ~l~~~~~~v~LvIVG~g~~~~s~d~ee~~~~~~l~~li~~l~L~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E 651 (784)
++ ++++|+|+|+|+. .+.++++++. .+|.|+| .++.+++..+|+. +|++|+||..|
T Consensus 287 ~~----~~~~l~ivG~G~~-----------~~~l~~~~~~----~~V~f~G----~v~~~ev~~~~~~-aDv~V~pS~~E 342 (465)
T PLN02871 287 RL----PGARLAFVGDGPY-----------REELEKMFAG----TPTVFTG----MLQGDELSQAYAS-GDVFVMPSESE 342 (465)
T ss_pred hC----CCcEEEEEeCChH-----------HHHHHHHhcc----CCeEEec----cCCHHHHHHHHHH-CCEEEECCccc
Confidence 75 5799999999853 2445555543 3699999 6777899999995 99999999999
Q ss_pred CCcHHHHHHHHcCCcEEEcCcccccccccc---CceEEEECCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHh
Q 003947 652 AFGLTVVEAMTCGLPTFATCNGGPAEIIVH---GKSGFHIDPYKGDQATGILVDFFEKCKVDPGHWDEISQGGLKRIQEK 728 (784)
Q Consensus 652 ~fGltvlEAMA~GlPVIaT~~GG~~EiI~d---g~~G~li~p~d~e~lAe~I~~~l~~ll~dp~~~~~m~~~a~~~v~~~ 728 (784)
+||++++||||||+|||+|+.||..|++.+ +.+|++++|+|+++++++|.+ +++||+.+++|++++++++ ++
T Consensus 343 ~~g~~vlEAmA~G~PVI~s~~gg~~eiv~~~~~~~~G~lv~~~d~~~la~~i~~----ll~~~~~~~~~~~~a~~~~-~~ 417 (465)
T PLN02871 343 TLGFVVLEAMASGVPVVAARAGGIPDIIPPDQEGKTGFLYTPGDVDDCVEKLET----LLADPELRERMGAAAREEV-EK 417 (465)
T ss_pred ccCcHHHHHHHcCCCEEEcCCCCcHhhhhcCCCCCceEEeCCCCHHHHHHHHHH----HHhCHHHHHHHHHHHHHHH-Hh
Confidence 999999999999999999999999999999 999999999999999999975 4579999999999999998 78
Q ss_pred CCHHHHHHHHHH-HHHH-hhhhh
Q 003947 729 YTWKIYSERLLN-LSGV-YGFWK 749 (784)
Q Consensus 729 ytw~~~a~~ll~-ly~~-~~~~~ 749 (784)
|||+.+++++++ +|+. .-+|+
T Consensus 418 fsw~~~a~~l~~~~Y~~~~~~~~ 440 (465)
T PLN02871 418 WDWRAATRKLRNEQYSAAIWFWR 440 (465)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999998 6875 23443
No 23
>cd03818 GT1_ExpC_like This family is most closely related to the GT1 family of glycosyltransferases. ExpC in Rhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucan (exopolysaccharide II).
Probab=100.00 E-value=3.1e-37 Score=345.79 Aligned_cols=364 Identities=15% Similarity=0.198 Sum_probs=248.2
Q ss_pred HHHHHHHHcCCCcccceEEEecCCCCCCCCCcCcceeeecCcCCeEEEEccCCCCcccccccccccCChhhHHHHHHH--
Q 003947 294 EMLLRIKQQGLDITPRILIITRLLPDAVGTTCGQRVEKVYGTKYSDILRVPFRTEEGIVRKWISRFEVWPYLETFTED-- 371 (784)
Q Consensus 294 eLa~~L~~~GheV~~~i~VvTr~~~~~~g~~~~~~~e~v~~~~~v~IlrvP~~~~~~~~~~~isr~~l~~yl~~f~~~-- 371 (784)
+|+++|+++||+|+ ++|....... .+ |+++++++...... ...++|...+...
T Consensus 15 ~la~~L~~~G~~v~----~~~~~~~~~~-----------~~--~v~~~~~~~~~~~~--------~~~~~~~~~~~~~~~ 69 (396)
T cd03818 15 HLAPALAAQGHEVV----FLTEPNAAPP-----------PG--GVRVVRYRPPRGPT--------SGTHPYLREFEEAVL 69 (396)
T ss_pred HHHHHHHHCCCEEE----EEecCCCCCC-----------CC--CeeEEEecCCCCCC--------CCCCccchhHHHHHH
Confidence 57778899999999 9987643210 01 58888887543311 1233343333222
Q ss_pred ----HHHHHHH--HcCCCceEEEEcCCChhHHHHHHHHh-CCCcEEEEecCCcccCCCCCcchhhhccc---cccccchh
Q 003947 372 ----VATEIIQ--ELQCKPDLIIGNYSDGNIVASLLAHK-LDVTQCTIAHALELTKYPDSDINWKKLDD---KYHFSCQF 441 (784)
Q Consensus 372 ----~~~~i~~--~~~~~pDIIh~~~~~~~lva~llar~-~gvp~V~t~H~l~~~k~~~s~~~~~~~~~---~y~~~~~~ 441 (784)
+.+.+.. ..+.+|||||+|...+ .+..+++. .++|+|...|-+................. ..+.....
T Consensus 70 ~~~~~~~~~~~~~~~~~~pdvi~~h~~~~--~~~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (396)
T cd03818 70 RGQAVARALLALRAKGFRPDVIVAHPGWG--ETLFLKDVWPDAPLIGYFEFYYRAEGADVGFDPEFPPSLDDALRLRNRN 147 (396)
T ss_pred HHHHHHHHHHHHHhcCCCCCEEEECCccc--hhhhHHHhCCCCCEEEEEeeeecCCCCCCCCCCCCCCchhHHHHHHHhh
Confidence 2222222 1245899999997654 22334444 46888876653322111000000000000 01111111
Q ss_pred hhhHHHhcccCEEEecChHhHhhccccccccccccccccccceeeecCCCCCCCceEEecCCCCCCCCCCCcHHHHhhhc
Q 003947 442 TADLFAMNRTDFIITSTFQEIAGSKDTVGQYESHTAFSLPGLYRVVNGIDAFDPKFNIVSPGADMTIYFPYMEEKRRLKH 521 (784)
Q Consensus 442 ~~e~~a~~~AD~IIt~S~~~~~~~~~~vgqYe~~~~f~~p~l~~~~~gi~~f~~k~~VIpnGvD~~~f~p~~~~~~rl~~ 521 (784)
...+..++.||.+|++|....+...+ .+..|+.|||||+|.+.|.|......+..
T Consensus 148 ~~~~~~~~~ad~vi~~s~~~~~~~~~------------------------~~~~ki~vI~ngvd~~~f~~~~~~~~~~~- 202 (396)
T cd03818 148 ALILLALAQADAGVSPTRWQRSTFPA------------------------ELRSRISVIHDGIDTDRLRPDPQARLRLP- 202 (396)
T ss_pred hHhHHHHHhCCEEECCCHHHHhhCcH------------------------hhccceEEeCCCccccccCCCchhhhccc-
Confidence 11345789999999999887652111 11468999999999999887654322111
Q ss_pred chhhhHHhhcCchhhhhhhccccCCCCCEEEEEec-ccCCCChHHHHHHHHHhHccCCCeEEEEEeCCCCCCcccHHHH-
Q 003947 522 FHSEIEELLYSPVENKEHLCVLKDSSKPILFTMAR-LDRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQ- 599 (784)
Q Consensus 522 ~~~~~~~~l~~~~~~~~~~gll~~~~k~iIl~vGR-L~~~Kgi~~LieA~~~l~~~~~~v~LvIVG~g~~~~s~d~ee~- 599 (784)
...++ .+++++|+|+|| +.+.||++.+++|++++.+..++++|+|+|++........+..
T Consensus 203 ----------------~~~~~--~~~~~~i~~vgR~l~~~Kg~~~ll~a~~~l~~~~~~~~lvivG~~~~~~g~~~~~~~ 264 (396)
T cd03818 203 ----------------NGRVL--TPGDEVITFVARNLEPYRGFHVFMRALPRLLRARPDARVVIVGGDGVSYGAPPPDGE 264 (396)
T ss_pred ----------------ccccC--CCCCeEEEEECCCcccccCHHHHHHHHHHHHHHCCCcEEEEEcCCCcccCCCCCCcc
Confidence 11112 456789999998 9999999999999999988889999999998532111000000
Q ss_pred HHHHHHHHHHHhcC---CCCcEEEccCcCCcCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcCccccc
Q 003947 600 AEMKKMYGLIDTYK---LNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCNGGPA 676 (784)
Q Consensus 600 ~~~~~l~~li~~l~---L~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMA~GlPVIaT~~GG~~ 676 (784)
...+. ++++++ ..++|.|+| .++.+++.++|+. +|++|+||..|++|++++||||||+|||+|+.||+.
T Consensus 265 ~~~~~---~~~~~~~~~~~~~V~f~G----~v~~~~~~~~l~~-adv~v~~s~~e~~~~~llEAmA~G~PVIas~~~g~~ 336 (396)
T cd03818 265 SWKQH---MLDELGGRLDLSRVHFLG----RVPYDQYLALLQV-SDVHVYLTYPFVLSWSLLEAMACGCLVVGSDTAPVR 336 (396)
T ss_pred cHHHH---HHHHhhcccCcceEEEeC----CCCHHHHHHHHHh-CcEEEEcCcccccchHHHHHHHCCCCEEEcCCCCch
Confidence 01122 223332 247899999 7778899999995 999999999999999999999999999999999999
Q ss_pred cccccCceEEEECCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHH
Q 003947 677 EIIVHGKSGFHIDPYKGDQATGILVDFFEKCKVDPGHWDEISQGGLKRIQEKYTWKIYSERLL 739 (784)
Q Consensus 677 EiI~dg~~G~li~p~d~e~lAe~I~~~l~~ll~dp~~~~~m~~~a~~~v~~~ytw~~~a~~ll 739 (784)
|++.++.+|++++++|++++|++|.+ +++||+.+.+|+++|++++.++|||+.++++++
T Consensus 337 e~i~~~~~G~lv~~~d~~~la~~i~~----ll~~~~~~~~l~~~ar~~~~~~fs~~~~~~~~~ 395 (396)
T cd03818 337 EVITDGENGLLVDFFDPDALAAAVIE----LLDDPARRARLRRAARRTALRYDLLSVCLPRQL 395 (396)
T ss_pred hhcccCCceEEcCCCCHHHHHHHHHH----HHhCHHHHHHHHHHHHHHHHHhccHHHHHHHHh
Confidence 99999999999999999999999984 557999999999999999989999999999886
No 24
>cd03805 GT1_ALG2_like This family is most closely related to the GT1 family of glycosyltransferases. ALG2, a 1,3-mannosyltransferase, in yeast catalyzes the mannosylation of Man(2)GlcNAc(2)-dolichol diphosphate and Man(1)GlcNAc(2)-dolichol diphosphate to form Man(3)GlcNAc(2)-dolichol diphosphate. A deficiency of this enzyme causes an abnormal accumulation of Man1GlcNAc2-PP-dolichol and Man2GlcNAc2-PP-dolichol, which is associated with a type of congenital disorders of glycosylation (CDG), designated CDG-Ii, in humans.
Probab=100.00 E-value=7.2e-37 Score=340.22 Aligned_cols=386 Identities=20% Similarity=0.244 Sum_probs=261.0
Q ss_pred eEEEEEccCccccccCccCCCCcccchhhhHHHHHHHHHHHHHHHHHcCCCcccceEEEecCCCCCCCCCcCcceeeecC
Q 003947 255 FNVVIFTPHGYFAQDNVLGYPDTGGQVVYILDQVRALENEMLLRIKQQGLDITPRILIITRLLPDAVGTTCGQRVEKVYG 334 (784)
Q Consensus 255 mkI~ivs~h~~~~~~~~lg~p~tGG~~vyv~d~~raLe~eLa~~L~~~GheV~~~i~VvTr~~~~~~g~~~~~~~e~v~~ 334 (784)
|||+++.|... .||.++++. +|+++|+++||+|+ |+|...+.. .......+
T Consensus 1 mkIl~~~~~~~-----------~gG~e~~~~--------~la~~L~~~G~~V~----v~~~~~~~~------~~~~~~~~ 51 (392)
T cd03805 1 LRVAFIHPDLG-----------IGGAERLVV--------DAALALQSRGHEVT----IYTSHHDPS------HCFEETKD 51 (392)
T ss_pred CeEEEECCCCC-----------CchHHHHHH--------HHHHHHHhCCCeEE----EEcCCCCch------hcchhccC
Confidence 79999976643 489999999 66666799999999 998642211 00011111
Q ss_pred cCCeEEEEccCCCCcccccccccccCChhhHHHHHHHHHHHHH--HHcCCCceEEEEcCCChhHHHHHHHHhCCCcEEEE
Q 003947 335 TKYSDILRVPFRTEEGIVRKWISRFEVWPYLETFTEDVATEII--QELQCKPDLIIGNYSDGNIVASLLAHKLDVTQCTI 412 (784)
Q Consensus 335 ~~~v~IlrvP~~~~~~~~~~~isr~~l~~yl~~f~~~~~~~i~--~~~~~~pDIIh~~~~~~~lva~llar~~gvp~V~t 412 (784)
.++.+...+.....+. .++ .. .+..+.......+. .....+||+||+|....+..+ +....+.|++++
T Consensus 52 -~~~~i~~~~~~~~~~~----~~~--~~-~~~~~~~~~~~~~~~~~~~~~~~Dvi~~~~~~~~~~~--~~~~~~~~~i~~ 121 (392)
T cd03805 52 -GTLPVRVRGDWLPRSI----FGR--FH-ILCAYLRMLYLALYLLLLPDEKYDVFIVDQVSACVPL--LKLFSPSKILFY 121 (392)
T ss_pred -CeeEEEEEeEEEcchh----hHh--HH-HHHHHHHHHHHHHHHHhcccCCCCEEEEcCcchHHHH--HHHhcCCcEEEE
Confidence 0122222211000000 000 00 01111111111111 112568999999876543322 233334899999
Q ss_pred ecCCcccCCCCCcchhhhccccccccchhhhhHHHhcccCEEEecChHhHhhccccccccccccccccccceeeecCCCC
Q 003947 413 AHALELTKYPDSDINWKKLDDKYHFSCQFTADLFAMNRTDFIITSTFQEIAGSKDTVGQYESHTAFSLPGLYRVVNGIDA 492 (784)
Q Consensus 413 ~H~l~~~k~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~~~~~~~~~~vgqYe~~~~f~~p~l~~~~~gi~~ 492 (784)
.|...... .....+ ....++.. ....|..+++.||.|+++|....+...+.. ....
T Consensus 122 ~h~~~~~~--~~~~~~--~~~~~~~~-~~~~e~~~~~~ad~ii~~s~~~~~~~~~~~------------------~~~~- 177 (392)
T cd03805 122 CHFPDQLL--AQRGSL--LKRLYRKP-FDWLEEFTTGMADKIVVNSNFTASVFKKTF------------------PSLA- 177 (392)
T ss_pred EecChHHh--cCCCcH--HHHHHHHH-HHHHHHHHhhCceEEEEcChhHHHHHHHHh------------------cccc-
Confidence 99422110 000000 00111110 112466789999999999987665222211 0111
Q ss_pred CCCceEEecCCCCCCCCCCCcHHHHhhhcchhhhHHhhcCchhhhhhhccccCCCCCEEEEEecccCCCChHHHHHHHHH
Q 003947 493 FDPKFNIVSPGADMTIYFPYMEEKRRLKHFHSEIEELLYSPVENKEHLCVLKDSSKPILFTMARLDRVKNLTGLVEWYGK 572 (784)
Q Consensus 493 f~~k~~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~~gll~~~~k~iIl~vGRL~~~Kgi~~LieA~~~ 572 (784)
..++.+|+||+|.+.|.+......+ +..+. .+++++|+++||+.+.||++.+++|+.+
T Consensus 178 -~~~~~vi~n~vd~~~~~~~~~~~~~-------------------~~~~~--~~~~~~i~~~grl~~~Kg~~~ll~a~~~ 235 (392)
T cd03805 178 -KNPREVVYPCVDTDSFESTSEDPDP-------------------GLLIP--KSGKKTFLSINRFERKKNIALAIEAFAI 235 (392)
T ss_pred -cCCcceeCCCcCHHHcCcccccccc-------------------ccccc--CCCceEEEEEeeecccCChHHHHHHHHH
Confidence 2344699999999888764322100 11121 4677899999999999999999999999
Q ss_pred hHccC---CCeEEEEEeCCCCCCcccHHHHHHHHHHHHHHHh-cCCCCcEEEccCcCCcCChhHHHHHHHccccEEEeCC
Q 003947 573 NAKLR---ELVNLVVVGGDRRKESKDLEEQAEMKKMYGLIDT-YKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPA 648 (784)
Q Consensus 573 l~~~~---~~v~LvIVG~g~~~~s~d~ee~~~~~~l~~li~~-l~L~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS 648 (784)
+.+.. ++++|+++|+++.. ..++..+.+++++++++ +++.++|.|+| .++.+++..+++. +|++++||
T Consensus 236 l~~~~~~~~~~~l~i~G~~~~~---~~~~~~~~~~l~~~~~~~~~l~~~V~f~g----~~~~~~~~~~l~~-ad~~l~~s 307 (392)
T cd03805 236 LKDKLAEFKNVRLVIAGGYDPR---VAENVEYLEELQRLAEELLLLEDQVIFLP----SISDSQKELLLSS-ARALLYTP 307 (392)
T ss_pred HHhhcccccCeEEEEEcCCCCC---CchhHHHHHHHHHHHHHhcCCCceEEEeC----CCChHHHHHHHhh-CeEEEECC
Confidence 98776 79999999998652 12233456778889999 99999999999 6778899999995 99999999
Q ss_pred CCCCCcHHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHh
Q 003947 649 LYEAFGLTVVEAMTCGLPTFATCNGGPAEIIVHGKSGFHIDPYKGDQATGILVDFFEKCKVDPGHWDEISQGGLKRIQEK 728 (784)
Q Consensus 649 ~~E~fGltvlEAMA~GlPVIaT~~GG~~EiI~dg~~G~li~p~d~e~lAe~I~~~l~~ll~dp~~~~~m~~~a~~~v~~~ 728 (784)
..|+||++++||||||+|||+|+.||..|++.++.+|+++++ |+++++++|.+ ++++|+.+++|+++|++++.++
T Consensus 308 ~~E~~g~~~lEAma~G~PvI~s~~~~~~e~i~~~~~g~~~~~-~~~~~a~~i~~----l~~~~~~~~~~~~~a~~~~~~~ 382 (392)
T cd03805 308 SNEHFGIVPLEAMYAGKPVIACNSGGPLETVVDGETGFLCEP-TPEEFAEAMLK----LANDPDLADRMGAAGRKRVKEK 382 (392)
T ss_pred CcCCCCchHHHHHHcCCCEEEECCCCcHHHhccCCceEEeCC-CHHHHHHHHHH----HHhChHHHHHHHHHHHHHHHHh
Confidence 999999999999999999999999999999999999999976 89999999874 5579999999999999999999
Q ss_pred CCHHHHHHHH
Q 003947 729 YTWKIYSERL 738 (784)
Q Consensus 729 ytw~~~a~~l 738 (784)
|||+.+++++
T Consensus 383 ~s~~~~~~~~ 392 (392)
T cd03805 383 FSTEAFAERL 392 (392)
T ss_pred cCHHHHhhhC
Confidence 9999998864
No 25
>TIGR03088 stp2 sugar transferase, PEP-CTERM/EpsH1 system associated. Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate.
Probab=100.00 E-value=1.2e-36 Score=337.23 Aligned_cols=365 Identities=16% Similarity=0.188 Sum_probs=260.9
Q ss_pred EEEEEccCccccccCccCCCCcccchhhhHHHHHHHHHHHHHHHHHcCCCcccceEEEecCCCCCCCCCcCcceeeecCc
Q 003947 256 NVVIFTPHGYFAQDNVLGYPDTGGQVVYILDQVRALENEMLLRIKQQGLDITPRILIITRLLPDAVGTTCGQRVEKVYGT 335 (784)
Q Consensus 256 kI~ivs~h~~~~~~~~lg~p~tGG~~vyv~d~~raLe~eLa~~L~~~GheV~~~i~VvTr~~~~~~g~~~~~~~e~v~~~ 335 (784)
||+.+.++. ..||++.++. +|++.|.+.|+++. |++....+ ...+....
T Consensus 3 ~il~ii~~~-----------~~GG~e~~~~--------~l~~~l~~~~~~~~----v~~~~~~~--------~~~~~~~~ 51 (374)
T TIGR03088 3 LIVHVVYRF-----------DVGGLENGLV--------NLINHLPADRYRHA----VVALTEVS--------AFRKRIQR 51 (374)
T ss_pred eEEEEeCCC-----------CCCcHHHHHH--------HHHhhccccccceE----EEEcCCCC--------hhHHHHHh
Confidence 677775443 3599999999 55556688999987 77632111 11111111
Q ss_pred CCeEEEEccCCCCcccccccccccCChhhHHHHHHHHHHHHHHHcCCCceEEEEcCCChhHHHHHHHHhCCCcE-EEEec
Q 003947 336 KYSDILRVPFRTEEGIVRKWISRFEVWPYLETFTEDVATEIIQELQCKPDLIIGNYSDGNIVASLLAHKLDVTQ-CTIAH 414 (784)
Q Consensus 336 ~~v~IlrvP~~~~~~~~~~~isr~~l~~yl~~f~~~~~~~i~~~~~~~pDIIh~~~~~~~lva~llar~~gvp~-V~t~H 414 (784)
.++.+++++..... .+. +...+.+.+.+ .+|||||+|+..+ ..+.++++..++|. +++.|
T Consensus 52 ~~i~~~~~~~~~~~-----------~~~----~~~~l~~~l~~---~~~Divh~~~~~~-~~~~~~~~~~~~~~~i~~~h 112 (374)
T TIGR03088 52 PDVAFYALHKQPGK-----------DVA----VYPQLYRLLRQ---LRPDIVHTRNLAA-LEAQLPAALAGVPARIHGEH 112 (374)
T ss_pred cCceEEEeCCCCCC-----------ChH----HHHHHHHHHHH---hCCCEEEEcchhH-HHHHHHHHhcCCCeEEEeec
Confidence 35677777643210 111 11223333333 4899999997644 33455666677774 44555
Q ss_pred CCcccCCCCCcchhhhccccccccchhhhhHHHhcccCEEEecChHhHhhccccccccccccccccccceeeecCCCCCC
Q 003947 415 ALELTKYPDSDINWKKLDDKYHFSCQFTADLFAMNRTDFIITSTFQEIAGSKDTVGQYESHTAFSLPGLYRVVNGIDAFD 494 (784)
Q Consensus 415 ~l~~~k~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~~~~~~~~~~vgqYe~~~~f~~p~l~~~~~gi~~f~ 494 (784)
+....... ...| .+.+ ..+...+.+|.+|++|....+...+. .|++ .
T Consensus 113 ~~~~~~~~--~~~~-----~~~~-----~~~~~~~~~~~~i~vs~~~~~~~~~~-------------------~~~~--~ 159 (374)
T TIGR03088 113 GRDVFDLD--GSNW-----KYRW-----LRRLYRPLIHHYVAVSRDLEDWLRGP-------------------VKVP--P 159 (374)
T ss_pred Ccccccch--hhHH-----HHHH-----HHHHHHhcCCeEEEeCHHHHHHHHHh-------------------cCCC--h
Confidence 43211100 0011 1111 23345567899999998876522211 1233 5
Q ss_pred CceEEecCCCCCCCCCCCcHHHHhhhcchhhhHHhhcCchhhhhhhccccCCCCCEEEEEecccCCCChHHHHHHHHHhH
Q 003947 495 PKFNIVSPGADMTIYFPYMEEKRRLKHFHSEIEELLYSPVENKEHLCVLKDSSKPILFTMARLDRVKNLTGLVEWYGKNA 574 (784)
Q Consensus 495 ~k~~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~~gll~~~~k~iIl~vGRL~~~Kgi~~LieA~~~l~ 574 (784)
.++.+||||+|.+.|.+......... +.... .+++++|+++||+.+.||++.+++|+..+.
T Consensus 160 ~~~~vi~ngvd~~~~~~~~~~~~~~~-----------------~~~~~--~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~ 220 (374)
T TIGR03088 160 AKIHQIYNGVDTERFHPSRGDRSPIL-----------------PPDFF--ADESVVVGTVGRLQAVKDQPTLVRAFALLV 220 (374)
T ss_pred hhEEEeccCccccccCCCccchhhhh-----------------HhhcC--CCCCeEEEEEecCCcccCHHHHHHHHHHHH
Confidence 68999999999988876542211100 01111 456789999999999999999999999987
Q ss_pred ccCC----CeEEEEEeCCCCCCcccHHHHHHHHHHHHHHHhcCCCCcEEEccCcCCcCChhHHHHHHHccccEEEeCCCC
Q 003947 575 KLRE----LVNLVVVGGDRRKESKDLEEQAEMKKMYGLIDTYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALY 650 (784)
Q Consensus 575 ~~~~----~v~LvIVG~g~~~~s~d~ee~~~~~~l~~li~~l~L~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~ 650 (784)
+..+ +++|+++|+|+. .+.+++.++++++.+++.|+|.+ +++..+++. +|++|+||..
T Consensus 221 ~~~~~~~~~~~l~i~G~g~~-----------~~~~~~~~~~~~~~~~v~~~g~~------~~~~~~~~~-adi~v~pS~~ 282 (374)
T TIGR03088 221 RQLPEGAERLRLVIVGDGPA-----------RGACEQMVRAAGLAHLVWLPGER------DDVPALMQA-LDLFVLPSLA 282 (374)
T ss_pred HhCcccccceEEEEecCCch-----------HHHHHHHHHHcCCcceEEEcCCc------CCHHHHHHh-cCEEEecccc
Confidence 6544 789999999853 35678888999999999999943 368888885 9999999999
Q ss_pred CCCcHHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCC
Q 003947 651 EAFGLTVVEAMTCGLPTFATCNGGPAEIIVHGKSGFHIDPYKGDQATGILVDFFEKCKVDPGHWDEISQGGLKRIQEKYT 730 (784)
Q Consensus 651 E~fGltvlEAMA~GlPVIaT~~GG~~EiI~dg~~G~li~p~d~e~lAe~I~~~l~~ll~dp~~~~~m~~~a~~~v~~~yt 730 (784)
|+||++++|||+||+|||+|+.||..|++.++.+|++++++|+++++++|.+ +++|++.+.+++++|++++.++||
T Consensus 283 Eg~~~~~lEAma~G~Pvv~s~~~g~~e~i~~~~~g~~~~~~d~~~la~~i~~----l~~~~~~~~~~~~~a~~~~~~~fs 358 (374)
T TIGR03088 283 EGISNTILEAMASGLPVIATAVGGNPELVQHGVTGALVPPGDAVALARALQP----YVSDPAARRAHGAAGRARAEQQFS 358 (374)
T ss_pred ccCchHHHHHHHcCCCEEEcCCCCcHHHhcCCCceEEeCCCCHHHHHHHHHH----HHhCHHHHHHHHHHHHHHHHHhCC
Confidence 9999999999999999999999999999999999999999999999999985 457999999999999999999999
Q ss_pred HHHHHHHHHHHHHH
Q 003947 731 WKIYSERLLNLSGV 744 (784)
Q Consensus 731 w~~~a~~ll~ly~~ 744 (784)
|+.++++++++|+.
T Consensus 359 ~~~~~~~~~~~y~~ 372 (374)
T TIGR03088 359 INAMVAAYAGLYDQ 372 (374)
T ss_pred HHHHHHHHHHHHHH
Confidence 99999999999974
No 26
>cd05844 GT1_like_7 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center
Probab=100.00 E-value=3e-36 Score=331.29 Aligned_cols=282 Identities=19% Similarity=0.286 Sum_probs=230.0
Q ss_pred CCCceEEEEcCCChhHHHHHHHHhCCCcEEEEecCCcccCCCCCcchhhhccccccccchhhhhHHHhcccCEEEecChH
Q 003947 381 QCKPDLIIGNYSDGNIVASLLAHKLDVTQCTIAHALELTKYPDSDINWKKLDDKYHFSCQFTADLFAMNRTDFIITSTFQ 460 (784)
Q Consensus 381 ~~~pDIIh~~~~~~~lva~llar~~gvp~V~t~H~l~~~k~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~~ 460 (784)
..+||+||+|....+..+..++++.|+|++++.|+......... .... .+.. ....+...++.+|.|+++|+.
T Consensus 80 ~~~~dvvh~~~~~~~~~~~~~~~~~~~p~i~~~h~~~~~~~~~~----~~~~-~~~~--~~~~~~~~~~~~d~ii~~s~~ 152 (367)
T cd05844 80 RHRPDLVHAHFGFDGVYALPLARRLGVPLVVTFHGFDATTSLAL----LLRS-RWAL--YARRRRRLARRAALFIAVSQF 152 (367)
T ss_pred hhCCCEEEeccCchHHHHHHHHHHcCCCEEEEEeCccccccchh----hccc-chhH--HHHHHHHHHHhcCEEEECCHH
Confidence 34899999998777788888899999999999997543221110 0000 0111 112344578899999999988
Q ss_pred hHhhccccccccccccccccccceeeecCCCCCCCceEEecCCCCCCCCCCCcHHHHhhhcchhhhHHhhcCchhhhhhh
Q 003947 461 EIAGSKDTVGQYESHTAFSLPGLYRVVNGIDAFDPKFNIVSPGADMTIYFPYMEEKRRLKHFHSEIEELLYSPVENKEHL 540 (784)
Q Consensus 461 ~~~~~~~~vgqYe~~~~f~~p~l~~~~~gi~~f~~k~~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~~ 540 (784)
..+...+ .|++ ..++.++|||+|.+.|.+...
T Consensus 153 ~~~~~~~--------------------~~~~--~~~i~vi~~g~d~~~~~~~~~-------------------------- 184 (367)
T cd05844 153 IRDRLLA--------------------LGFP--PEKVHVHPIGVDTAKFTPATP-------------------------- 184 (367)
T ss_pred HHHHHHH--------------------cCCC--HHHeEEecCCCCHHhcCCCCC--------------------------
Confidence 7652211 1333 668999999999877665311
Q ss_pred ccccCCCCCEEEEEecccCCCChHHHHHHHHHhHccCCCeEEEEEeCCCCCCcccHHHHHHHHHHHHHHHhcCCCCcEEE
Q 003947 541 CVLKDSSKPILFTMARLDRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYGLIDTYKLNGQFRW 620 (784)
Q Consensus 541 gll~~~~k~iIl~vGRL~~~Kgi~~LieA~~~l~~~~~~v~LvIVG~g~~~~s~d~ee~~~~~~l~~li~~l~L~~~V~f 620 (784)
..++++++++|++.+.||++.+++|+..+.+..++++|+++|+|+. .++++++++++++.++|+|
T Consensus 185 ----~~~~~~i~~~G~~~~~K~~~~li~a~~~l~~~~~~~~l~ivG~g~~-----------~~~~~~~~~~~~~~~~v~~ 249 (367)
T cd05844 185 ----ARRPPRILFVGRFVEKKGPLLLLEAFARLARRVPEVRLVIIGDGPL-----------LAALEALARALGLGGRVTF 249 (367)
T ss_pred ----CCCCcEEEEEEeeccccChHHHHHHHHHHHHhCCCeEEEEEeCchH-----------HHHHHHHHHHcCCCCeEEE
Confidence 2356789999999999999999999999988788999999998742 3567888999999999999
Q ss_pred ccCcCCcCChhHHHHHHHccccEEEeCCC------CCCCcHHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHH
Q 003947 621 ISSQMNRVRNGELYRYICDTKGAFVQPAL------YEAFGLTVVEAMTCGLPTFATCNGGPAEIIVHGKSGFHIDPYKGD 694 (784)
Q Consensus 621 lG~~~~~v~~~el~~~la~aadvfV~PS~------~E~fGltvlEAMA~GlPVIaT~~GG~~EiI~dg~~G~li~p~d~e 694 (784)
+| .++.+++..+++. +|++|+||. .|+||++++|||+||+|||+|+.||..|++.++.+|+++++.|++
T Consensus 250 ~g----~~~~~~l~~~~~~-ad~~v~ps~~~~~~~~E~~~~~~~EA~a~G~PvI~s~~~~~~e~i~~~~~g~~~~~~d~~ 324 (367)
T cd05844 250 LG----AQPHAEVRELMRR-ARIFLQPSVTAPSGDAEGLPVVLLEAQASGVPVVATRHGGIPEAVEDGETGLLVPEGDVA 324 (367)
T ss_pred CC----CCCHHHHHHHHHh-CCEEEECcccCCCCCccCCchHHHHHHHcCCCEEEeCCCCchhheecCCeeEEECCCCHH
Confidence 99 6778899999995 999999997 599999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHH
Q 003947 695 QATGILVDFFEKCKVDPGHWDEISQGGLKRIQEKYTWKIYSERLLNL 741 (784)
Q Consensus 695 ~lAe~I~~~l~~ll~dp~~~~~m~~~a~~~v~~~ytw~~~a~~ll~l 741 (784)
+++++|.++ ++|++.+++|+.++++++.++|||+.+++++.++
T Consensus 325 ~l~~~i~~l----~~~~~~~~~~~~~a~~~~~~~~s~~~~~~~l~~i 367 (367)
T cd05844 325 ALAAALGRL----LADPDLRARMGAAGRRRVEERFDLRRQTAKLEAL 367 (367)
T ss_pred HHHHHHHHH----HcCHHHHHHHHHHHHHHHHHHCCHHHHHHHHhcC
Confidence 999999854 5799999999999999999999999999998763
No 27
>PRK15490 Vi polysaccharide biosynthesis protein TviE; Provisional
Probab=100.00 E-value=5e-36 Score=339.58 Aligned_cols=400 Identities=15% Similarity=0.128 Sum_probs=269.9
Q ss_pred CCCCcccchhhhHHHHHHHHHHHHHHHHHcCCCcccceEEEecCCCCCCCCCcCcceeeecCcCCeEEEEccCCCCcc--
Q 003947 273 GYPDTGGQVVYILDQVRALENEMLLRIKQQGLDITPRILIITRLLPDAVGTTCGQRVEKVYGTKYSDILRVPFRTEEG-- 350 (784)
Q Consensus 273 g~p~tGG~~vyv~d~~raLe~eLa~~L~~~GheV~~~i~VvTr~~~~~~g~~~~~~~e~v~~~~~v~IlrvP~~~~~~-- 350 (784)
|+-..||.+..+..++-++.....+.=+-.|+.|..+|.++||......|..+--..-...+.++..+-+++..-...
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (578)
T PRK15490 169 GSLGSGGAERQISRLAIEIARKYRQKGKIGGLKVEEPVELIIRSLTPELRQDFFLKEVLEEQVEVLEIAKITGNLFDDAT 248 (578)
T ss_pred cCCCCCchHHHHHHHHHHHHHHHHhcccccccccccceeEEEeecCcccCcchhHHHHHhcCCceEEeeccchhhhhhcc
Confidence 344579999999987776655444444445788888899999997766664443211111233334444444211110
Q ss_pred ----cccccccccCChhhHHHHHHHHHHHHHHHcCCCceEEEEcCCChhHHHHHHHHhCCCcEEEE-ecCCcccCCCCCc
Q 003947 351 ----IVRKWISRFEVWPYLETFTEDVATEIIQELQCKPDLIIGNYSDGNIVASLLAHKLDVTQCTI-AHALELTKYPDSD 425 (784)
Q Consensus 351 ----~~~~~isr~~l~~yl~~f~~~~~~~i~~~~~~~pDIIh~~~~~~~lva~llar~~gvp~V~t-~H~l~~~k~~~s~ 425 (784)
.++.+++ .+.|-. .+.......+++ ..+|||||+|...+++.+.++++..++|++++ .|+.... .
T Consensus 249 ~~~~~~~~~~~--~~~~~~-~~~~~~l~~~ir--~~rpDIVHt~~~~a~l~g~laA~lagvpviv~~~h~~~~~----~- 318 (578)
T PRK15490 249 IESPELRLLLS--HLPPVC-KYGIKHLVPHLC--ERKLDYLSVWQDGACLMIALAALIAGVPRIQLGLRGLPPV----V- 318 (578)
T ss_pred ccchHHHHHHh--cCChHH-HHHHHHHHHHHH--HcCCCEEEEcCcccHHHHHHHHHhcCCCEEEEeecccCCc----c-
Confidence 0111111 011111 111112222222 45999999999888888999999999999654 5652111 0
Q ss_pred chhhhccccccccchhhhhHHHhcccCEEEecChHhHhhccccccccccccccccccceeeecCCCCCCCceEEecCCCC
Q 003947 426 INWKKLDDKYHFSCQFTADLFAMNRTDFIITSTFQEIAGSKDTVGQYESHTAFSLPGLYRVVNGIDAFDPKFNIVSPGAD 505 (784)
Q Consensus 426 ~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~~~~~~~~~~vgqYe~~~~f~~p~l~~~~~gi~~f~~k~~VIpnGvD 505 (784)
....+...+....+ .......+| +++.|....+.+.+ ..+++ ..|+.|||||+|
T Consensus 319 -~~r~~~~e~~~~~~---a~~i~~~sd-~v~~s~~v~~~l~~-------------------~lgip--~~KI~VIyNGVD 372 (578)
T PRK15490 319 -RKRLFKPEYEPLYQ---ALAVVPGVD-FMSNNHCVTRHYAD-------------------WLKLE--AKHFQVVYNGVL 372 (578)
T ss_pred -hhhHHHHHHHHhhh---hceeEecch-hhhccHHHHHHHHH-------------------HhCCC--HHHEEEEeCCcc
Confidence 00001111110000 001133344 44555443331111 12343 779999999999
Q ss_pred CCCCCCCcHHHHhhhcchhhhHHhhcCchhhhhhhccccCCCCCEEEEEecccCCCChHHHHHHHHHhHccCCCeEEEEE
Q 003947 506 MTIYFPYMEEKRRLKHFHSEIEELLYSPVENKEHLCVLKDSSKPILFTMARLDRVKNLTGLVEWYGKNAKLRELVNLVVV 585 (784)
Q Consensus 506 ~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~~gll~~~~k~iIl~vGRL~~~Kgi~~LieA~~~l~~~~~~v~LvIV 585 (784)
...|.|........+. ....++ +++.++|+++||+.+.||...+++++.++.+..++++|+|+
T Consensus 373 ~~rf~p~~~~~~~~r~---------------~~~~~l--~~~~~vIg~VgRl~~~Kg~~~LI~A~a~llk~~pdirLvIV 435 (578)
T PRK15490 373 PPSTEPSSEVPHKIWQ---------------QFTQKT--QDADTTIGGVFRFVGDKNPFAWIDFAARYLQHHPATRFVLV 435 (578)
T ss_pred hhhcCccchhhHHHHH---------------Hhhhcc--CCCCcEEEEEEEEehhcCHHHHHHHHHHHHhHCCCeEEEEE
Confidence 9988875432110000 001222 34568999999999999999999999988777799999999
Q ss_pred eCCCCCCcccHHHHHHHHHHHHHHHhcCCCCcEEEccCcCCcCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCC
Q 003947 586 GGDRRKESKDLEEQAEMKKMYGLIDTYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGL 665 (784)
Q Consensus 586 G~g~~~~s~d~ee~~~~~~l~~li~~l~L~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMA~Gl 665 (784)
|+|+. .++++++++++++.++|.|+|++ +++..+|+. +|+||+||.+|+||++++||||||+
T Consensus 436 GdG~~-----------~eeLk~la~elgL~d~V~FlG~~------~Dv~~~Laa-ADVfVlPS~~EGfp~vlLEAMA~Gl 497 (578)
T PRK15490 436 GDGDL-----------RAEAQKRAEQLGILERILFVGAS------RDVGYWLQK-MNVFILFSRYEGLPNVLIEAQMVGV 497 (578)
T ss_pred eCchh-----------HHHHHHHHHHcCCCCcEEECCCh------hhHHHHHHh-CCEEEEcccccCccHHHHHHHHhCC
Confidence 99853 46788999999999999999943 468888885 9999999999999999999999999
Q ss_pred cEEEcCccccccccccCceEEEECCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Q 003947 666 PTFATCNGGPAEIIVHGKSGFHIDPYKGDQATGILVDFFEKCKVDPGHWDEISQGGLKRIQEKYTWKIYSERLLNLSGV 744 (784)
Q Consensus 666 PVIaT~~GG~~EiI~dg~~G~li~p~d~e~lAe~I~~~l~~ll~dp~~~~~m~~~a~~~v~~~ytw~~~a~~ll~ly~~ 744 (784)
|||+|+.||..|+|.+|.+|+++++.|++++++++..+ .++..++..+..|+++|++++.++|||+.++++|+++|..
T Consensus 498 PVVATdvGG~~EiV~dG~nG~LVp~~D~~aLa~ai~lA-~aL~~ll~~~~~mg~~ARe~V~e~FS~e~Mv~~y~ki~~~ 575 (578)
T PRK15490 498 PVISTPAGGSAECFIEGVSGFILDDAQTVNLDQACRYA-EKLVNLWRSRTGICQQTQSFLQERFTVEHMVGTFVKTIAS 575 (578)
T ss_pred CEEEeCCCCcHHHcccCCcEEEECCCChhhHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999988876422 2445566667789999999999999999999999999864
No 28
>cd04955 GT1_like_6 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=100.00 E-value=2.5e-35 Score=322.43 Aligned_cols=361 Identities=16% Similarity=0.188 Sum_probs=254.0
Q ss_pred EEEEEccCccccccCccCCCCcccchhhhHHHHHHHHHHHHHHHHHcCCCcccceEEEecCCCCCCCCCcCcceeeecCc
Q 003947 256 NVVIFTPHGYFAQDNVLGYPDTGGQVVYILDQVRALENEMLLRIKQQGLDITPRILIITRLLPDAVGTTCGQRVEKVYGT 335 (784)
Q Consensus 256 kI~ivs~h~~~~~~~~lg~p~tGG~~vyv~d~~raLe~eLa~~L~~~GheV~~~i~VvTr~~~~~~g~~~~~~~e~v~~~ 335 (784)
||+|++.+++| |..||++.++. +|+++|.++||+|+ |+|........ ....
T Consensus 1 ~i~~i~~~~~~--------~~~gG~~~~~~--------~la~~L~~~g~~v~----v~~~~~~~~~~---------~~~~ 51 (363)
T cd04955 1 KIAIIGTRGIP--------AKYGGFETFVE--------ELAPRLVARGHEVT----VYCRSPYPKQK---------ETEY 51 (363)
T ss_pred CeEEEecCcCC--------cccCcHHHHHH--------HHHHHHHhcCCCEE----EEEccCCCCCc---------cccc
Confidence 69999998874 35799999999 66666799999999 88865332110 1122
Q ss_pred CCeEEEEccCCCCcccccccccccCChhhHHHHHHHHHHHHHHHcCCCceEEEEcCCChhHHHHHHHHhCCCcEEEEecC
Q 003947 336 KYSDILRVPFRTEEGIVRKWISRFEVWPYLETFTEDVATEIIQELQCKPDLIIGNYSDGNIVASLLAHKLDVTQCTIAHA 415 (784)
Q Consensus 336 ~~v~IlrvP~~~~~~~~~~~isr~~l~~yl~~f~~~~~~~i~~~~~~~pDIIh~~~~~~~lva~llar~~gvp~V~t~H~ 415 (784)
.+++++++|.....+ . ......+ ..+...+. ...++|+||...+.. ..+..++++.++|++++.|+
T Consensus 52 ~~i~~~~~~~~~~~~-~---------~~~~~~~-~~~~~~~~--~~~~~~~i~~~~~~~-~~~~~~~~~~~~~~v~~~h~ 117 (363)
T cd04955 52 NGVRLIHIPAPEIGG-L---------GTIIYDI-LAILHALF--VKRDIDHVHALGPAI-APFLPLLRLKGKKVVVNMDG 117 (363)
T ss_pred CCceEEEcCCCCccc-h---------hhhHHHH-HHHHHHHh--ccCCeEEEEecCccH-HHHHHHHHhcCCCEEEEccC
Confidence 467888887643211 0 0000000 01111111 134666666655544 34444555669999999998
Q ss_pred CcccCCCCCcchhhhccccccccchhhhhHHHhcccCEEEecChHhHhhccccccccccccccccccceeeecCCCCCCC
Q 003947 416 LELTKYPDSDINWKKLDDKYHFSCQFTADLFAMNRTDFIITSTFQEIAGSKDTVGQYESHTAFSLPGLYRVVNGIDAFDP 495 (784)
Q Consensus 416 l~~~k~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~~~~~~~~~~vgqYe~~~~f~~p~l~~~~~gi~~f~~ 495 (784)
...... .|..... .+ ....++.+++.||.||++|+...+...+. .|.
T Consensus 118 ~~~~~~-----~~~~~~~--~~--~~~~~~~~~~~ad~ii~~s~~~~~~~~~~-------------------~~~----- 164 (363)
T cd04955 118 LEWKRA-----KWGRPAK--RY--LKFGEKLAVKFADRLIADSPGIKEYLKEK-------------------YGR----- 164 (363)
T ss_pred cceeec-----ccccchh--HH--HHHHHHHHHhhccEEEeCCHHHHHHHHHh-------------------cCC-----
Confidence 643211 1111100 01 11245667899999999998877632111 121
Q ss_pred ceEEecCCCCCCCCCCCcHHHHhhhcchhhhHHhhcCchhhhhhhccccCCCCCEEEEEecccCCCChHHHHHHHHHhHc
Q 003947 496 KFNIVSPGADMTIYFPYMEEKRRLKHFHSEIEELLYSPVENKEHLCVLKDSSKPILFTMARLDRVKNLTGLVEWYGKNAK 575 (784)
Q Consensus 496 k~~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~~gll~~~~k~iIl~vGRL~~~Kgi~~LieA~~~l~~ 575 (784)
+..+||||+|...+.+.... .+..+. ++++.++++||+.+.||++.+++|++++.+
T Consensus 165 ~~~~i~ngv~~~~~~~~~~~---------------------~~~~~~---~~~~~i~~~G~~~~~Kg~~~li~a~~~l~~ 220 (363)
T cd04955 165 DSTYIPYGADHVVSSEEDEI---------------------LKKYGL---EPGRYYLLVGRIVPENNIDDLIEAFSKSNS 220 (363)
T ss_pred CCeeeCCCcChhhcchhhhh---------------------HHhcCC---CCCcEEEEEecccccCCHHHHHHHHHhhcc
Confidence 22899999998766541111 012232 334578899999999999999999998754
Q ss_pred cCCCeEEEEEeCCCCCCcccHHHHHHHHHHHHHHH-hcCCCCcEEEccCcCCcCChhHHHHHHHccccEEEeCCCC-CCC
Q 003947 576 LRELVNLVVVGGDRRKESKDLEEQAEMKKMYGLID-TYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALY-EAF 653 (784)
Q Consensus 576 ~~~~v~LvIVG~g~~~~s~d~ee~~~~~~l~~li~-~l~L~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~-E~f 653 (784)
+++|+++|+++.. ..+.+.+. .+++.++|+|+| .++.+++.++++. +|++++||.. |+|
T Consensus 221 ---~~~l~ivG~~~~~-----------~~~~~~~~~~~~~~~~V~~~g----~~~~~~~~~~~~~-ad~~v~ps~~~e~~ 281 (363)
T cd04955 221 ---GKKLVIVGNADHN-----------TPYGKLLKEKAAADPRIIFVG----PIYDQELLELLRY-AALFYLHGHSVGGT 281 (363)
T ss_pred ---CceEEEEcCCCCc-----------chHHHHHHHHhCCCCcEEEcc----ccChHHHHHHHHh-CCEEEeCCccCCCC
Confidence 7999999998541 12233333 677889999999 6778899999995 9999999998 999
Q ss_pred cHHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHH
Q 003947 654 GLTVVEAMTCGLPTFATCNGGPAEIIVHGKSGFHIDPYKGDQATGILVDFFEKCKVDPGHWDEISQGGLKRIQEKYTWKI 733 (784)
Q Consensus 654 GltvlEAMA~GlPVIaT~~GG~~EiI~dg~~G~li~p~d~e~lAe~I~~~l~~ll~dp~~~~~m~~~a~~~v~~~ytw~~ 733 (784)
|++++|||+||+|||+|+.|+..|++.+ +|+++++.|. ++++|. ++++|++.+.++++++++++.++|||+.
T Consensus 282 ~~~~~EAma~G~PvI~s~~~~~~e~~~~--~g~~~~~~~~--l~~~i~----~l~~~~~~~~~~~~~~~~~~~~~fs~~~ 353 (363)
T cd04955 282 NPSLLEAMAYGCPVLASDNPFNREVLGD--KAIYFKVGDD--LASLLE----ELEADPEEVSAMAKAARERIREKYTWEK 353 (363)
T ss_pred ChHHHHHHHcCCCEEEecCCccceeecC--CeeEecCchH--HHHHHH----HHHhCHHHHHHHHHHHHHHHHHhCCHHH
Confidence 9999999999999999999999999976 7999988775 787776 5567999999999999999988999999
Q ss_pred HHHHHHHHHH
Q 003947 734 YSERLLNLSG 743 (784)
Q Consensus 734 ~a~~ll~ly~ 743 (784)
++++++++|+
T Consensus 354 ~~~~~~~~y~ 363 (363)
T cd04955 354 IADQYEELYK 363 (363)
T ss_pred HHHHHHHHhC
Confidence 9999999984
No 29
>PRK15179 Vi polysaccharide biosynthesis protein TviE; Provisional
Probab=100.00 E-value=1.1e-35 Score=350.29 Aligned_cols=459 Identities=12% Similarity=0.111 Sum_probs=291.5
Q ss_pred CHHHHHHHHHHHHHHhhcCCCCCChHHH-------HHHHHhcCcccccCCchHHHHHHHHHHHHhhcCCCcchHhHHhcC
Q 003947 178 DLGTLQSSLRMAEKYLSMLAPDTSYAEF-------EQKFQEIGLERGWGDNAEHVLGMIQLLLDLLQAPESSTLETFLGK 250 (784)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ 250 (784)
..+.=..++++|.+..+.=. .-|.+. ..-+|.+|=|----++--|+.-|-+++...-+- .+.| |-.-
T Consensus 203 ~~~~A~~~~~~a~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~-~~~~ 276 (694)
T PRK15179 203 ALWRARDVLQAGLDAIGDGA--RKLTRRLVDLNADLAALRRLGVEGDGRDVPVSILVLEKMLQEIGRR---RNAE-YDAG 276 (694)
T ss_pred CHHHHHHHHHHHHHhhCcch--HHHHHHHHHHHHHHHHHHHcCcccccCCCceeeeeHHHHHHHHhhc---Cccc-ccCC
Confidence 34444556666655544333 122222 224677877765556667877777777654421 1110 0011
Q ss_pred CCcce-EEEEEccCccccccCccCCCCcccchhhhHHHHHHHHHHHHHHHHHcCC------------CcccceEEEecCC
Q 003947 251 IPRVF-NVVIFTPHGYFAQDNVLGYPDTGGQVVYILDQVRALENEMLLRIKQQGL------------DITPRILIITRLL 317 (784)
Q Consensus 251 ~p~~m-kI~ivs~h~~~~~~~~lg~p~tGG~~vyv~d~~raLe~eLa~~L~~~Gh------------eV~~~i~VvTr~~ 317 (784)
+-... ||+++.+.. ..||.+.++++++.+ +.+.|. ++. |++++..
T Consensus 277 ~~~~~~rIl~vi~sl-----------~~GGAEr~~~~La~~--------l~~~~~~~~~~~g~g~~~~~~--V~~~~~~- 334 (694)
T PRK15179 277 PESFVGPVLMINGSL-----------GAGGAERQFVNTAVA--------LQSAIQQGQSIAGYGVLGPVQ--VVCRSLR- 334 (694)
T ss_pred CCCCcceEEEEeCCC-----------CCCcHHHHHHHHHHH--------HHhcccCcccccCccCCCCcE--EEEEecc-
Confidence 11234 888885443 359999999955555 577644 233 2243221
Q ss_pred CCCCCC-CcCcceeeecCcCCeEEEEccCCCCccccc--ccc---cc--cCChhhHHHHHHHHHHHHHHHcCCCceEEEE
Q 003947 318 PDAVGT-TCGQRVEKVYGTKYSDILRVPFRTEEGIVR--KWI---SR--FEVWPYLETFTEDVATEIIQELQCKPDLIIG 389 (784)
Q Consensus 318 ~~~~g~-~~~~~~e~v~~~~~v~IlrvP~~~~~~~~~--~~i---sr--~~l~~yl~~f~~~~~~~i~~~~~~~pDIIh~ 389 (784)
...|+ .+...+. ..|+.+..++..+..+... .+. .+ ..+..........+.+.+. +.+|||||+
T Consensus 335 -~~~g~~~~~~~L~----~~Gv~v~~l~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~L~~~lk---~~kpDIVH~ 406 (694)
T PRK15179 335 -SREGADFFAATLA----DAGIPVSVYSDMQAWGGCEFSSLLAPYREYLRFLPKQIIEGTTKLTDVMR---SSVPSVVHI 406 (694)
T ss_pred -cccCcchHHHHHH----hCCCeEEEeccCCccCcccccccchhhHHHhhhcchhHHHHHHHHHHHHH---HcCCcEEEE
Confidence 11111 1111111 1356666665443211000 000 00 0000011111222233232 448999999
Q ss_pred cCCChhHHHHHHHHhCCCcEEE-EecCCcccCCCCCcchhhhccccccccchhhhhHHHhcccCEEEecChHhHhhcccc
Q 003947 390 NYSDGNIVASLLAHKLDVTQCT-IAHALELTKYPDSDINWKKLDDKYHFSCQFTADLFAMNRTDFIITSTFQEIAGSKDT 468 (784)
Q Consensus 390 ~~~~~~lva~llar~~gvp~V~-t~H~l~~~k~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~~~~~~~~~~ 468 (784)
|.+.+++++.++++..++|+|+ +.|++..... .. .++ ..+... ...+....++.+|++|....+...
T Consensus 407 h~~~a~~lg~lAa~~~gvPvIv~t~h~~~~~~~--~~-~~~---~~~~~l----~~~l~~~~~~i~Vs~S~~~~~~l~-- 474 (694)
T PRK15179 407 WQDGSIFACALAALLAGVPRIVLSVRTMPPVDR--PD-RYR---VEYDII----YSELLKMRGVALSSNSQFAAHRYA-- 474 (694)
T ss_pred eCCcHHHHHHHHHHHcCCCEEEEEeCCCccccc--hh-HHH---HHHHHH----HHHHHhcCCeEEEeCcHHHHHHHH--
Confidence 9999988999999999999876 5576432111 00 110 011110 111222334566666655443111
Q ss_pred ccccccccccccccceeeecCCCCCCCceEEecCCCCCCCCCCCcHHHHhhhcchhhhHHhhcCchhhhhhhccccCCCC
Q 003947 469 VGQYESHTAFSLPGLYRVVNGIDAFDPKFNIVSPGADMTIYFPYMEEKRRLKHFHSEIEELLYSPVENKEHLCVLKDSSK 548 (784)
Q Consensus 469 vgqYe~~~~f~~p~l~~~~~gi~~f~~k~~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~~gll~~~~k 548 (784)
...|++ ..|+.|||||||...|.+.+...... ..+....+++.
T Consensus 475 -----------------~~~g~~--~~kI~VI~NGVd~~~f~~~~~~~~~~------------------~~~~~~~~~~~ 517 (694)
T PRK15179 475 -----------------DWLGVD--ERRIPVVYNGLAPLKSVQDDACTAMM------------------AQFDARTSDAR 517 (694)
T ss_pred -----------------HHcCCC--hhHEEEECCCcCHHhcCCCchhhHHH------------------HhhccccCCCC
Confidence 112333 67999999999998876543222110 00111113456
Q ss_pred CEEEEEecccCCCChHHHHHHHHHhHccCCCeEEEEEeCCCCCCcccHHHHHHHHHHHHHHHhcCCCCcEEEccCcCCcC
Q 003947 549 PILFTMARLDRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYGLIDTYKLNGQFRWISSQMNRV 628 (784)
Q Consensus 549 ~iIl~vGRL~~~Kgi~~LieA~~~l~~~~~~v~LvIVG~g~~~~s~d~ee~~~~~~l~~li~~l~L~~~V~flG~~~~~v 628 (784)
++|+++||+.+.||++.+++|++++.+..++++|+|+|+|+. .++++++++++++.++|.|+|++.
T Consensus 518 ~vIg~VGRL~~~KG~~~LI~A~a~l~~~~p~~~LvIvG~G~~-----------~~~L~~l~~~lgL~~~V~flG~~~--- 583 (694)
T PRK15179 518 FTVGTVMRVDDNKRPFLWVEAAQRFAASHPKVRFIMVGGGPL-----------LESVREFAQRLGMGERILFTGLSR--- 583 (694)
T ss_pred eEEEEEEeCCccCCHHHHHHHHHHHHHHCcCeEEEEEccCcc-----------hHHHHHHHHHcCCCCcEEEcCCcc---
Confidence 799999999999999999999999988889999999999854 366889999999999999999543
Q ss_pred ChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCH--HHHHHHHHHHHHH
Q 003947 629 RNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCNGGPAEIIVHGKSGFHIDPYKG--DQATGILVDFFEK 706 (784)
Q Consensus 629 ~~~el~~~la~aadvfV~PS~~E~fGltvlEAMA~GlPVIaT~~GG~~EiI~dg~~G~li~p~d~--e~lAe~I~~~l~~ 706 (784)
++..+|+. +|+||+||.+|+||++++|||+||+|||+|+.||+.|+|.++.+|++++|+|. ++++++|.+++..
T Consensus 584 ---dv~~ll~a-aDv~VlpS~~Egfp~vlLEAMA~G~PVVat~~gG~~EiV~dg~~GlLv~~~d~~~~~La~aL~~ll~~ 659 (694)
T PRK15179 584 ---RVGYWLTQ-FNAFLLLSRFEGLPNVLIEAQFSGVPVVTTLAGGAGEAVQEGVTGLTLPADTVTAPDVAEALARIHDM 659 (694)
T ss_pred ---hHHHHHHh-cCEEEeccccccchHHHHHHHHcCCeEEEECCCChHHHccCCCCEEEeCCCCCChHHHHHHHHHHHhC
Confidence 57888885 99999999999999999999999999999999999999999999999998874 6899999877755
Q ss_pred hcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Q 003947 707 CKVDPGHWDEISQGGLKRIQEKYTWKIYSERLLNLSG 743 (784)
Q Consensus 707 ll~dp~~~~~m~~~a~~~v~~~ytw~~~a~~ll~ly~ 743 (784)
+..++ .+++++++++.++|||+.++++++++|+
T Consensus 660 l~~~~----~l~~~ar~~a~~~FS~~~~~~~~~~lY~ 692 (694)
T PRK15179 660 CAADP----GIARKAADWASARFSLNQMIASTVRCYQ 692 (694)
T ss_pred hhccH----HHHHHHHHHHHHhCCHHHHHHHHHHHhC
Confidence 55554 5677899999999999999999999995
No 30
>cd03819 GT1_WavL_like This family is most closely related to the GT1 family of glycosyltransferases. WavL in Vibrio cholerae has been shown to be involved in the biosynthesis of the lipopolysaccharide core.
Probab=100.00 E-value=1.1e-35 Score=324.54 Aligned_cols=347 Identities=18% Similarity=0.220 Sum_probs=260.3
Q ss_pred CcccchhhhHHHHHHHHHHHHHHHHHcCCCcccceEEEecCCCCCCCCCcCcceeeecCcCCeEEEEccCCCCccccccc
Q 003947 276 DTGGQVVYILDQVRALENEMLLRIKQQGLDITPRILIITRLLPDAVGTTCGQRVEKVYGTKYSDILRVPFRTEEGIVRKW 355 (784)
Q Consensus 276 ~tGG~~vyv~d~~raLe~eLa~~L~~~GheV~~~i~VvTr~~~~~~g~~~~~~~e~v~~~~~v~IlrvP~~~~~~~~~~~ 355 (784)
..||.+.++. +|+++|+++||+|. +++...+. .... ...+++++++++...+.
T Consensus 8 ~~gG~e~~~~--------~l~~~L~~~g~~v~----v~~~~~~~------~~~~----~~~~~~~~~~~~~~~~~----- 60 (355)
T cd03819 8 ESGGVERGTL--------ELARALVERGHRSL----VASAGGRL------VAEL----EAEGSRHIKLPFISKNP----- 60 (355)
T ss_pred ccCcHHHHHH--------HHHHHHHHcCCEEE----EEcCCCch------HHHH----HhcCCeEEEccccccch-----
Confidence 4599999999 66667799999998 88753211 1111 12245666666543221
Q ss_pred ccccCChhhHHHHHHHHHHHHHHHcCCCceEEEEcCCChhHHHHHHHHhCCCcEEEEecCCcccCCCCCcchhhhccccc
Q 003947 356 ISRFEVWPYLETFTEDVATEIIQELQCKPDLIIGNYSDGNIVASLLAHKLDVTQCTIAHALELTKYPDSDINWKKLDDKY 435 (784)
Q Consensus 356 isr~~l~~yl~~f~~~~~~~i~~~~~~~pDIIh~~~~~~~lva~llar~~gvp~V~t~H~l~~~k~~~s~~~~~~~~~~y 435 (784)
+..+. +...+.+.+. +.+||+||+|+....+.+.++++..++|++.+.|+......
T Consensus 61 ------~~~~~-~~~~l~~~~~---~~~~dii~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~-------------- 116 (355)
T cd03819 61 ------LRILL-NVARLRRLIR---EEKVDIVHARSRAPAWSAYLAARRTRPPFVTTVHGFYSVNF-------------- 116 (355)
T ss_pred ------hhhHH-HHHHHHHHHH---HcCCCEEEECCCchhHHHHHHHHhcCCCEEEEeCCchhhHH--------------
Confidence 11111 1222333333 45899999999887788888888889999999998643210
Q ss_pred cccchhhhhHHHhcccCEEEecChHhHhhccccccccccccccccccceeeecCCCCCCCceEEecCCCCCCCCCCCcHH
Q 003947 436 HFSCQFTADLFAMNRTDFIITSTFQEIAGSKDTVGQYESHTAFSLPGLYRVVNGIDAFDPKFNIVSPGADMTIYFPYMEE 515 (784)
Q Consensus 436 ~~~~~~~~e~~a~~~AD~IIt~S~~~~~~~~~~vgqYe~~~~f~~p~l~~~~~gi~~f~~k~~VIpnGvD~~~f~p~~~~ 515 (784)
.....+..+|.++++|+...+...+ ..+++ ..++.+||||+|...|.+....
T Consensus 117 -------~~~~~~~~~~~vi~~s~~~~~~~~~-------------------~~~~~--~~k~~~i~ngi~~~~~~~~~~~ 168 (355)
T cd03819 117 -------RYNAIMARGDRVIAVSNFIADHIRE-------------------NYGVD--PDRIRVIPRGVDLDRFDPGAVP 168 (355)
T ss_pred -------HHHHHHHhcCEEEEeCHHHHHHHHH-------------------hcCCC--hhhEEEecCCccccccCccccc
Confidence 0123467899999999877653221 12333 6799999999999888654322
Q ss_pred HHhhhcchhhhHHhhcCchhhhhhhccccCCCCCEEEEEecccCCCChHHHHHHHHHhHccCCCeEEEEEeCCCCCCccc
Q 003947 516 KRRLKHFHSEIEELLYSPVENKEHLCVLKDSSKPILFTMARLDRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKD 595 (784)
Q Consensus 516 ~~rl~~~~~~~~~~l~~~~~~~~~~gll~~~~k~iIl~vGRL~~~Kgi~~LieA~~~l~~~~~~v~LvIVG~g~~~~s~d 595 (784)
..... ..+++++. ++++++++++||+.+.||++.+++++.++++..++++|+|+|+++..
T Consensus 169 ~~~~~--------------~~~~~~~~--~~~~~~i~~~Gr~~~~Kg~~~li~~~~~l~~~~~~~~l~ivG~~~~~---- 228 (355)
T cd03819 169 PERIL--------------ALAREWPL--PKGKPVILLPGRLTRWKGQEVFIEALARLKKDDPDVHLLIVGDAQGR---- 228 (355)
T ss_pred hHHHH--------------HHHHHcCC--CCCceEEEEeeccccccCHHHHHHHHHHHHhcCCCeEEEEEECCccc----
Confidence 11100 01233443 56778999999999999999999999999887789999999998651
Q ss_pred HHHHHHHHHHHHHHHhcCCCCcEEEccCcCCcCChhHHHHHHHccccEEEeCC-CCCCCcHHHHHHHHcCCcEEEcCccc
Q 003947 596 LEEQAEMKKMYGLIDTYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPA-LYEAFGLTVVEAMTCGLPTFATCNGG 674 (784)
Q Consensus 596 ~ee~~~~~~l~~li~~l~L~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS-~~E~fGltvlEAMA~GlPVIaT~~GG 674 (784)
....+.+.+.++++++.++|.|+|+ .+++..+++. +|++++|| ..|+||++++|||+||+|||+|+.||
T Consensus 229 ---~~~~~~~~~~~~~~~~~~~v~~~g~------~~~~~~~l~~-ad~~i~ps~~~e~~~~~l~EA~a~G~PvI~~~~~~ 298 (355)
T cd03819 229 ---RFYYAELLELIKRLGLQDRVTFVGH------CSDMPAAYAL-ADIVVSASTEPEAFGRTAVEAQAMGRPVIASDHGG 298 (355)
T ss_pred ---chHHHHHHHHHHHcCCcceEEEcCC------cccHHHHHHh-CCEEEecCCCCCCCchHHHHHHhcCCCEEEcCCCC
Confidence 1334556678888999999999995 3478999995 99999999 79999999999999999999999999
Q ss_pred cccccccCceEEEECCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHH
Q 003947 675 PAEIIVHGKSGFHIDPYKGDQATGILVDFFEKCKVDPGHWDEISQGGLKRIQEKYTWKIY 734 (784)
Q Consensus 675 ~~EiI~dg~~G~li~p~d~e~lAe~I~~~l~~ll~dp~~~~~m~~~a~~~v~~~ytw~~~ 734 (784)
..|++.++.+|++++++|+++++++|...+ ..+++.+.+++++|++.+.++|+|+.+
T Consensus 299 ~~e~i~~~~~g~~~~~~~~~~l~~~i~~~~---~~~~~~~~~~~~~a~~~~~~~f~~~~~ 355 (355)
T cd03819 299 ARETVRPGETGLLVPPGDAEALAQALDQIL---SLLPEGRAKMFAKARMCVETLFSYDRM 355 (355)
T ss_pred cHHHHhCCCceEEeCCCCHHHHHHHHHHHH---hhCHHHHHHHHHHHHHHHHHhhhhccC
Confidence 999999999999999999999999997433 468999999999999999999999864
No 31
>KOG1111 consensus N-acetylglucosaminyltransferase complex, subunit PIG-A/SPT14, required for phosphatidylinositol biosynthesis/Sulfolipid synthase [Cell wall/membrane/envelope biogenesis; Posttranslational modification, protein turnover, chaperones; Lipid transport and metabolism]
Probab=100.00 E-value=2.1e-36 Score=317.63 Aligned_cols=364 Identities=17% Similarity=0.236 Sum_probs=278.3
Q ss_pred eEEEEEccCccccccCccCCCCcccchhhhHHHHHHHHHHHHHHHHHcCCCcccceEEEecCCCCCCCCCcCcceeeecC
Q 003947 255 FNVVIFTPHGYFAQDNVLGYPDTGGQVVYILDQVRALENEMLLRIKQQGLDITPRILIITRLLPDAVGTTCGQRVEKVYG 334 (784)
Q Consensus 255 mkI~ivs~h~~~~~~~~lg~p~tGG~~vyv~d~~raLe~eLa~~L~~~GheV~~~i~VvTr~~~~~~g~~~~~~~e~v~~ 334 (784)
++|+++|+|.| |.+||.+.++. .|++.|-+.||.|. ++|..+.+..|-.+-
T Consensus 1 ~~i~mVsdff~---------P~~ggveshiy--------~lSq~li~lghkVv----vithayg~r~giryl-------- 51 (426)
T KOG1111|consen 1 SRILMVSDFFY---------PSTGGVESHIY--------ALSQCLIRLGHKVV----VITHAYGNRVGIRYL-------- 51 (426)
T ss_pred CcceeeCcccc---------cCCCChhhhHH--------HhhcchhhcCCeEE----EEeccccCccceeee--------
Confidence 47999999999 67899999999 78888899999998 999888776553322
Q ss_pred cCCeEEEEccCCCCcccccccccccCChhhHHHHHHHHHHHHHHHcCCCceEEEEcCCChhH--HHHHHHHhCCCcEEEE
Q 003947 335 TKYSDILRVPFRTEEGIVRKWISRFEVWPYLETFTEDVATEIIQELQCKPDLIIGNYSDGNI--VASLLAHKLDVTQCTI 412 (784)
Q Consensus 335 ~~~v~IlrvP~~~~~~~~~~~isr~~l~~yl~~f~~~~~~~i~~~~~~~pDIIh~~~~~~~l--va~llar~~gvp~V~t 412 (784)
+.+.+++.+|+... .+....|-+.....-+...++ .++..|||+|++.+.+ -+...++.+|.+.|+|
T Consensus 52 t~glkVyylp~~v~--------~n~tT~ptv~~~~Pllr~i~l---rE~I~ivhghs~fS~lahe~l~hartMGlktVfT 120 (426)
T KOG1111|consen 52 TNGLKVYYLPAVVG--------YNQTTFPTVFSDFPLLRPILL---RERIEIVHGHSPFSYLAHEALMHARTMGLKTVFT 120 (426)
T ss_pred cCCceEEEEeeeee--------ecccchhhhhccCcccchhhh---hhceEEEecCChHHHHHHHHHHHHHhcCceEEEe
Confidence 33577888776432 111111111111111222233 3389999999988744 5777889999999999
Q ss_pred ecCCcccCCCCCcchhhhccccccccchhhhhHHHhcccCEEEecChHhHhhccccccccccccccccccceeeecCCCC
Q 003947 413 AHALELTKYPDSDINWKKLDDKYHFSCQFTADLFAMNRTDFIITSTFQEIAGSKDTVGQYESHTAFSLPGLYRVVNGIDA 492 (784)
Q Consensus 413 ~H~l~~~k~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~~~~~~~~~~vgqYe~~~~f~~p~l~~~~~gi~~ 492 (784)
-|++.... ++....... .++ .++...|.+||+|..-.+++ .....++
T Consensus 121 dHSlfGfa----d~~si~~n~----ll~-----~sL~~id~~IcVshtskent-------------------vlr~~L~- 167 (426)
T KOG1111|consen 121 DHSLFGFA----DIGSILTNK----LLP-----LSLANIDRIICVSHTSKENT-------------------VLRGALA- 167 (426)
T ss_pred cccccccc----chhhhhhcc----eee-----eeecCCCcEEEEeecCCCce-------------------EEEeccC-
Confidence 99975432 211111111 122 36788999999997655421 1122344
Q ss_pred CCCceEEecCCCCCCCCCCCcHHHHhhhcchhhhHHhhcCchhhhhhhccccCCCCCEEEEEecccCCCChHHHHHHHHH
Q 003947 493 FDPKFNIVSPGADMTIYFPYMEEKRRLKHFHSEIEELLYSPVENKEHLCVLKDSSKPILFTMARLDRVKNLTGLVEWYGK 572 (784)
Q Consensus 493 f~~k~~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~~gll~~~~k~iIl~vGRL~~~Kgi~~LieA~~~ 572 (784)
+.|+.+|||.++...|.|.+... .+.+...|+.++||-.+||+|.|++++.+
T Consensus 168 -p~kvsvIPnAv~~~~f~P~~~~~---------------------------~S~~i~~ivv~sRLvyrKGiDll~~iIp~ 219 (426)
T KOG1111|consen 168 -PAKVSVIPNAVVTHTFTPDAADK---------------------------PSADIITIVVASRLVYRKGIDLLLEIIPS 219 (426)
T ss_pred -HhHeeeccceeeccccccCcccc---------------------------CCCCeeEEEEEeeeeeccchHHHHHHHHH
Confidence 77999999999999999965321 02344779999999999999999999999
Q ss_pred hHccCCCeEEEEEeCCCCCCcccHHHHHHHHHHHHHHHhcCCCCcEEEccCcCCcCChhHHHHHHHccccEEEeCCCCCC
Q 003947 573 NAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYGLIDTYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEA 652 (784)
Q Consensus 573 l~~~~~~v~LvIVG~g~~~~s~d~ee~~~~~~l~~li~~l~L~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~ 652 (784)
+.+..|+++++|+|+||. ...+++..+++.++++|.++| -++.+++.+.+.. .|+|+.||+.|+
T Consensus 220 vc~~~p~vrfii~GDGPk-----------~i~lee~lEk~~l~~rV~~lG----~v~h~~Vr~vl~~-G~IFlntSlTEa 283 (426)
T KOG1111|consen 220 VCDKHPEVRFIIIGDGPK-----------RIDLEEMLEKLFLQDRVVMLG----TVPHDRVRDVLVR-GDIFLNTSLTEA 283 (426)
T ss_pred HHhcCCCeeEEEecCCcc-----------cchHHHHHHHhhccCceEEec----ccchHHHHHHHhc-CcEEeccHHHHH
Confidence 999999999999999986 245677788899999999999 7889999999996 999999999999
Q ss_pred CcHHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHH
Q 003947 653 FGLTVVEAMTCGLPTFATCNGGPAEIIVHGKSGFHIDPYKGDQATGILVDFFEKCKVDPGHWDEISQGGLKRIQEKYTWK 732 (784)
Q Consensus 653 fGltvlEAMA~GlPVIaT~~GG~~EiI~dg~~G~li~p~d~e~lAe~I~~~l~~ll~dp~~~~~m~~~a~~~v~~~ytw~ 732 (784)
||++++|||+||+|||+|++||++|++.++ -.......++++++++.+++.++...|. .-.+++.+.|+|+
T Consensus 284 fc~~ivEAaScGL~VVsTrVGGIpeVLP~d--~i~~~~~~~~dl~~~v~~ai~~~~~~p~-------~~h~~v~~~y~w~ 354 (426)
T KOG1111|consen 284 FCMVIVEAASCGLPVVSTRVGGIPEVLPED--MITLGEPGPDDLVGAVEKAITKLRTLPL-------EFHDRVKKMYSWK 354 (426)
T ss_pred HHHHHHHHHhCCCEEEEeecCCccccCCcc--ceeccCCChHHHHHHHHHHHHHhccCch-------hHHHHHHHhccHH
Confidence 999999999999999999999999999765 2334455789999999999988887764 3456777889999
Q ss_pred HHHHHHHHHHHH
Q 003947 733 IYSERLLNLSGV 744 (784)
Q Consensus 733 ~~a~~ll~ly~~ 744 (784)
..+++.+++|..
T Consensus 355 dVa~rTekvy~r 366 (426)
T KOG1111|consen 355 DVAERTEKVYDR 366 (426)
T ss_pred HHHHHHHHHHHH
Confidence 999999999764
No 32
>cd03792 GT1_Trehalose_phosphorylase Trehalose phosphorylase (TP) reversibly catalyzes trehalose synthesis and degradation from alpha-glucose-1-phosphate (alpha-Glc-1-P) and glucose. The catalyzing activity includes the phosphorolysis of trehalose, which produce alpha-Glc-1-P and glucose, and the subsequent synthesis of trehalose. This family is most closely related to the GT1 family of glycosyltransferases.
Probab=100.00 E-value=3.7e-35 Score=325.91 Aligned_cols=287 Identities=18% Similarity=0.187 Sum_probs=213.5
Q ss_pred CCCceEEEEcCCChhHHHHHHHHhCCCcEEEEecCCcccCCCCCcchhhhccccccccchhhhhHHHhcccCEEEecChH
Q 003947 381 QCKPDLIIGNYSDGNIVASLLAHKLDVTQCTIAHALELTKYPDSDINWKKLDDKYHFSCQFTADLFAMNRTDFIITSTFQ 460 (784)
Q Consensus 381 ~~~pDIIh~~~~~~~lva~llar~~gvp~V~t~H~l~~~k~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~~ 460 (784)
..+|||||+|++.+..+ ..+++..++|+|.+.|+..... ....| .+ .+..++.+|.+++.|..
T Consensus 83 ~~~~Dvv~~h~~~~~~~-~~~~~~~~~~~i~~~H~~~~~~---~~~~~-------~~------~~~~~~~~d~~i~~~~~ 145 (372)
T cd03792 83 DLDADVVVIHDPQPLAL-PLFKKKRGRPWIWRCHIDLSSP---NRRVW-------DF------LQPYIEDYDAAVFHLPE 145 (372)
T ss_pred cCCCCEEEECCCCchhH-HHhhhcCCCeEEEEeeeecCCC---cHHHH-------HH------HHHHHHhCCEEeecHHH
Confidence 45899999998875332 2233334899999999743211 00011 11 12356789999988844
Q ss_pred hHhhccccccccccccccccccceeeecCCCCCCCceEEecCCCCCCCCC--CCcHHHHhhhcchhhhHHhhcCchhhhh
Q 003947 461 EIAGSKDTVGQYESHTAFSLPGLYRVVNGIDAFDPKFNIVSPGADMTIYF--PYMEEKRRLKHFHSEIEELLYSPVENKE 538 (784)
Q Consensus 461 ~~~~~~~~vgqYe~~~~f~~p~l~~~~~gi~~f~~k~~VIpnGvD~~~f~--p~~~~~~rl~~~~~~~~~~l~~~~~~~~ 538 (784)
.+. .+++ ..++ +||||+|..... +....... ..++
T Consensus 146 ~~~------------------------~~~~--~~~~-vipngvd~~~~~~~~~~~~~~~----------------~~~~ 182 (372)
T cd03792 146 YVP------------------------PQVP--PRKV-IIPPSIDPLSGKNRELSPADIE----------------YILE 182 (372)
T ss_pred hcC------------------------CCCC--CceE-EeCCCCCCCccccCCCCHHHHH----------------HHHH
Confidence 322 1122 3455 999999975322 22111110 1234
Q ss_pred hhccccCCCCCEEEEEecccCCCChHHHHHHHHHhHccCCCeEEEEEeCCCCCCcccHHHHHHHHHHHHHHHhcCCCCcE
Q 003947 539 HLCVLKDSSKPILFTMARLDRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYGLIDTYKLNGQF 618 (784)
Q Consensus 539 ~~gll~~~~k~iIl~vGRL~~~Kgi~~LieA~~~l~~~~~~v~LvIVG~g~~~~s~d~ee~~~~~~l~~li~~l~L~~~V 618 (784)
.+|+ ++++++|+++||+++.||++.+++|++.+.+..++++|+|+|+|+.. +.+. .+.++++.+..++.++|
T Consensus 183 ~~~~--~~~~~~i~~vgrl~~~Kg~~~ll~a~~~l~~~~~~~~l~i~G~g~~~---~~~~---~~~~~~~~~~~~~~~~v 254 (372)
T cd03792 183 KYGI--DPERPYITQVSRFDPWKDPFGVIDAYRKVKERVPDPQLVLVGSGATD---DPEG---WIVYEEVLEYAEGDPDI 254 (372)
T ss_pred HhCC--CCCCcEEEEEeccccccCcHHHHHHHHHHHhhCCCCEEEEEeCCCCC---Cchh---HHHHHHHHHHhCCCCCe
Confidence 4665 67889999999999999999999999999887789999999999652 1111 12344555567788899
Q ss_pred EEccCcCCcCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHHHHHH
Q 003947 619 RWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCNGGPAEIIVHGKSGFHIDPYKGDQATG 698 (784)
Q Consensus 619 ~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMA~GlPVIaT~~GG~~EiI~dg~~G~li~p~d~e~lAe 698 (784)
.|+|... ++.+++..+++ ++|+||+||.+|+||++++||||||+|||+|+.||..++|.++.+|++++ +.+++++
T Consensus 255 ~~~~~~~--~~~~~~~~~~~-~ad~~v~~s~~Eg~g~~~lEA~a~G~Pvv~s~~~~~~~~i~~~~~g~~~~--~~~~~a~ 329 (372)
T cd03792 255 HVLTLPP--VSDLEVNALQR-ASTVVLQKSIREGFGLTVTEALWKGKPVIAGPVGGIPLQIEDGETGFLVD--TVEEAAV 329 (372)
T ss_pred EEEecCC--CCHHHHHHHHH-hCeEEEeCCCccCCCHHHHHHHHcCCCEEEcCCCCchhhcccCCceEEeC--CcHHHHH
Confidence 9998421 36788889888 49999999999999999999999999999999999999999999999987 4567788
Q ss_pred HHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Q 003947 699 ILVDFFEKCKVDPGHWDEISQGGLKRIQEKYTWKIYSERLLNLSGV 744 (784)
Q Consensus 699 ~I~~~l~~ll~dp~~~~~m~~~a~~~v~~~ytw~~~a~~ll~ly~~ 744 (784)
+|. +++.|++.+++|+++|++++.++|||+.++++++++|+.
T Consensus 330 ~i~----~ll~~~~~~~~~~~~a~~~~~~~~s~~~~~~~~~~~~~~ 371 (372)
T cd03792 330 RIL----YLLRDPELRRKMGANAREHVRENFLITRHLKDYLYLISK 371 (372)
T ss_pred HHH----HHHcCHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHh
Confidence 776 455799999999999999999999999999999999874
No 33
>cd03821 GT1_Bme6_like This family is most closely related to the GT1 family of glycosyltransferases. Bme6 in Brucella melitensis has been shown to be involved in the biosynthesis of a polysaccharide.
Probab=100.00 E-value=6.2e-35 Score=315.95 Aligned_cols=372 Identities=17% Similarity=0.197 Sum_probs=261.3
Q ss_pred EEEEEccCccccccCccCCCCcccchhhhHHHHHHHHHHHHHHHHHcCCCcccceEEEecCCCCCCCCCcCcceeeecCc
Q 003947 256 NVVIFTPHGYFAQDNVLGYPDTGGQVVYILDQVRALENEMLLRIKQQGLDITPRILIITRLLPDAVGTTCGQRVEKVYGT 335 (784)
Q Consensus 256 kI~ivs~h~~~~~~~~lg~p~tGG~~vyv~d~~raLe~eLa~~L~~~GheV~~~i~VvTr~~~~~~g~~~~~~~e~v~~~ 335 (784)
||++++++.+ |..||.+.++. +|++.|+++||+|+ ++|........ .....
T Consensus 1 kIl~i~~~~~---------~~~gG~~~~~~--------~l~~~L~~~g~~v~----v~~~~~~~~~~------~~~~~-- 51 (375)
T cd03821 1 KILHVIPSFD---------PKYGGPVRVVL--------NLSKALAKLGHEVT----VATTDAGGDPL------LVALN-- 51 (375)
T ss_pred CeEEEcCCCC---------cccCCeehHHH--------HHHHHHHhcCCcEE----EEecCCCCccc------hhhcc--
Confidence 6888887765 56799999999 66666799999999 88765322110 00000
Q ss_pred CCeEEEEccCCCCcccccccccccCChhhHHHHHHHHHHHHHHHcCCCceEEEEcCCCh--hHHHHHHHHhCCCcEEEEe
Q 003947 336 KYSDILRVPFRTEEGIVRKWISRFEVWPYLETFTEDVATEIIQELQCKPDLIIGNYSDG--NIVASLLAHKLDVTQCTIA 413 (784)
Q Consensus 336 ~~v~IlrvP~~~~~~~~~~~isr~~l~~yl~~f~~~~~~~i~~~~~~~pDIIh~~~~~~--~lva~llar~~gvp~V~t~ 413 (784)
+.......... .... .... ..+... ..........+||+||+|.... ...+..+++..++|++.+.
T Consensus 52 -~~~~~~~~~~~--~~~~-----~~~~---~~~~~~-~~~~~~~~~~~~dii~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 119 (375)
T cd03821 52 -GVPVKLFSINV--AYGL-----NLAR---YLFPPS-LLAWLRLNIREADIVHVHGLWSYPSLAAARAARKYGIPYVVSP 119 (375)
T ss_pred -Cceeeecccch--hhhh-----hhhh---hccChh-HHHHHHHhCCCCCEEEEecccchHHHHHHHHHHHhCCCEEEEc
Confidence 00000000000 0000 0000 000001 1111222256899999987443 4566667778899999999
Q ss_pred cCCcccCCCCCcchhhhccccccccchhhhhHHHhcccCEEEecChHhHhhccccccccccccccccccceeeecCCCCC
Q 003947 414 HALELTKYPDSDINWKKLDDKYHFSCQFTADLFAMNRTDFIITSTFQEIAGSKDTVGQYESHTAFSLPGLYRVVNGIDAF 493 (784)
Q Consensus 414 H~l~~~k~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~~~~~~~~~~vgqYe~~~~f~~p~l~~~~~gi~~f 493 (784)
|+....... ....+ .+....+..+...++.+|.+++++......... +. .
T Consensus 120 ~~~~~~~~~-~~~~~------~~~~~~~~~~~~~~~~~~~i~~~s~~~~~~~~~---------------------~~--~ 169 (375)
T cd03821 120 HGMLDPWAL-PHKAL------KKRLAWFLFERRLLQAAAAVHATSEQEAAEIRR---------------------LG--L 169 (375)
T ss_pred ccccccccc-ccchh------hhHHHHHHHHHHHHhcCCEEEECCHHHHHHHHh---------------------hC--C
Confidence 986432211 00001 111112223456788899999998766542111 11 2
Q ss_pred CCceEEecCCCCCCCCCCCcHHHHhhhcchhhhHHhhcCchhhhhhhccccCCCCCEEEEEecccCCCChHHHHHHHHHh
Q 003947 494 DPKFNIVSPGADMTIYFPYMEEKRRLKHFHSEIEELLYSPVENKEHLCVLKDSSKPILFTMARLDRVKNLTGLVEWYGKN 573 (784)
Q Consensus 494 ~~k~~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~~gll~~~~k~iIl~vGRL~~~Kgi~~LieA~~~l 573 (784)
..++.++|||+|.+.|.+...... ++..+. +.++++|+++||+.+.||++.+++++.++
T Consensus 170 ~~~~~vi~~~~~~~~~~~~~~~~~-------------------~~~~~~--~~~~~~i~~~G~~~~~K~~~~li~a~~~l 228 (375)
T cd03821 170 KAPIAVIPNGVDIPPFAALPSRGR-------------------RRKFPI--LPDKRIILFLGRLHPKKGLDLLIEAFAKL 228 (375)
T ss_pred cccEEEcCCCcChhccCcchhhhh-------------------hhhccC--CCCCcEEEEEeCcchhcCHHHHHHHHHHh
Confidence 668999999999988876543221 122332 56788999999999999999999999999
Q ss_pred HccCCCeEEEEEeCCCCCCcccHHHHHHHHHHHHHHHhcCCCCcEEEccCcCCcCChhHHHHHHHccccEEEeCCCCCCC
Q 003947 574 AKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYGLIDTYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAF 653 (784)
Q Consensus 574 ~~~~~~v~LvIVG~g~~~~s~d~ee~~~~~~l~~li~~l~L~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~f 653 (784)
.+.+++++|+++|.+.. .....++.+++++++.++|.|+| .++.+++..+++. +|++|+||..|+|
T Consensus 229 ~~~~~~~~l~i~G~~~~---------~~~~~~~~~~~~~~~~~~v~~~g----~~~~~~~~~~~~~-adv~v~ps~~e~~ 294 (375)
T cd03821 229 AERFPDWHLVIAGPDEG---------GYRAELKQIAAALGLEDRVTFTG----MLYGEDKAAALAD-ADLFVLPSHSENF 294 (375)
T ss_pred hhhcCCeEEEEECCCCc---------chHHHHHHHHHhcCccceEEEcC----CCChHHHHHHHhh-CCEEEeccccCCC
Confidence 88889999999998754 12344555678899999999999 6777899999996 9999999999999
Q ss_pred cHHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHH
Q 003947 654 GLTVVEAMTCGLPTFATCNGGPAEIIVHGKSGFHIDPYKGDQATGILVDFFEKCKVDPGHWDEISQGGLKRIQEKYTWKI 733 (784)
Q Consensus 654 GltvlEAMA~GlPVIaT~~GG~~EiI~dg~~G~li~p~d~e~lAe~I~~~l~~ll~dp~~~~~m~~~a~~~v~~~ytw~~ 733 (784)
|++++|||+||+|||+|+.||..+++.+ .+|+++++ +.++++++|. ++++||+.++++++++++.+.++|||+.
T Consensus 295 ~~~~~Eama~G~PvI~~~~~~~~~~~~~-~~~~~~~~-~~~~~~~~i~----~l~~~~~~~~~~~~~~~~~~~~~~s~~~ 368 (375)
T cd03821 295 GIVVAEALACGTPVVTTDKVPWQELIEY-GCGWVVDD-DVDALAAALR----RALELPQRLKAMGENGRALVEERFSWTA 368 (375)
T ss_pred CcHHHHHHhcCCCEEEcCCCCHHHHhhc-CceEEeCC-ChHHHHHHHH----HHHhCHHHHHHHHHHHHHHHHHhcCHHH
Confidence 9999999999999999999999999998 78998875 5589999987 4557999999999999999999999999
Q ss_pred HHHHHH
Q 003947 734 YSERLL 739 (784)
Q Consensus 734 ~a~~ll 739 (784)
++++++
T Consensus 369 ~~~~~~ 374 (375)
T cd03821 369 IAQQLL 374 (375)
T ss_pred HHHHhh
Confidence 999886
No 34
>cd03799 GT1_amsK_like This is a family of GT1 glycosyltransferases found specifically in certain bacteria. amsK in Erwinia amylovora, has been reported to be involved in the biosynthesis of amylovoran, a exopolysaccharide acting as a virulence factor.
Probab=100.00 E-value=8e-34 Score=309.12 Aligned_cols=272 Identities=20% Similarity=0.262 Sum_probs=223.5
Q ss_pred CCCceEEEEcCCCh-hHHHHHHHHhCCCcEEEEecCCcccCCCCCcchhhhccccccccchhhhhHHHhcccCEEEecCh
Q 003947 381 QCKPDLIIGNYSDG-NIVASLLAHKLDVTQCTIAHALELTKYPDSDINWKKLDDKYHFSCQFTADLFAMNRTDFIITSTF 459 (784)
Q Consensus 381 ~~~pDIIh~~~~~~-~lva~llar~~gvp~V~t~H~l~~~k~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~ 459 (784)
..+||+||+|+... ...+.+.++..++|++.+.|+...... ... ..++..++.+|.++++|+
T Consensus 77 ~~~~Dii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~---------------~~~~~~~~~~~~vi~~s~ 139 (355)
T cd03799 77 RLGIDHIHAHFGTTPATVAMLASRLGGIPYSFTAHGKDIFRS--PDA---------------IDLDEKLARADFVVAISE 139 (355)
T ss_pred hcCCCEEEECCCCchHHHHHHHHHhcCCCEEEEEeccccccc--Cch---------------HHHHHHHhhCCEEEECCH
Confidence 45899999998754 455566666668999999997432110 000 123456889999999998
Q ss_pred HhHhhccccccccccccccccccceeeecCCCCCCCceEEecCCCCCCCCCCCcHHHHhhhcchhhhHHhhcCchhhhhh
Q 003947 460 QEIAGSKDTVGQYESHTAFSLPGLYRVVNGIDAFDPKFNIVSPGADMTIYFPYMEEKRRLKHFHSEIEELLYSPVENKEH 539 (784)
Q Consensus 460 ~~~~~~~~~vgqYe~~~~f~~p~l~~~~~gi~~f~~k~~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~ 539 (784)
..++..++. .|.. ..++.++|||+|.+.|.+...
T Consensus 140 ~~~~~l~~~-------------------~~~~--~~~~~vi~~~~d~~~~~~~~~------------------------- 173 (355)
T cd03799 140 YNRQQLIRL-------------------LGCD--PDKIHVVHCGVDLERFPPRPP------------------------- 173 (355)
T ss_pred HHHHHHHHh-------------------cCCC--cccEEEEeCCcCHHHcCCccc-------------------------
Confidence 887632221 1222 678999999999887765430
Q ss_pred hccccCCCCCEEEEEecccCCCChHHHHHHHHHhHccCCCeEEEEEeCCCCCCcccHHHHHHHHHHHHHHHhcCCCCcEE
Q 003947 540 LCVLKDSSKPILFTMARLDRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYGLIDTYKLNGQFR 619 (784)
Q Consensus 540 ~gll~~~~k~iIl~vGRL~~~Kgi~~LieA~~~l~~~~~~v~LvIVG~g~~~~s~d~ee~~~~~~l~~li~~l~L~~~V~ 619 (784)
....+++.|+++|++.+.||++.+++++.++.+..++++|+++|+++. .+.+.+.++++++.++|+
T Consensus 174 ---~~~~~~~~i~~~g~~~~~k~~~~l~~~~~~l~~~~~~~~l~i~G~~~~-----------~~~~~~~~~~~~~~~~v~ 239 (355)
T cd03799 174 ---PPPGEPLRILSVGRLVEKKGLDYLLEALALLKDRGIDFRLDIVGDGPL-----------RDELEALIAELGLEDRVT 239 (355)
T ss_pred ---cccCCCeEEEEEeeeccccCHHHHHHHHHHHhhcCCCeEEEEEECCcc-----------HHHHHHHHHHcCCCCeEE
Confidence 013466789999999999999999999999988778999999999854 356778888889999999
Q ss_pred EccCcCCcCChhHHHHHHHccccEEEeCCCC------CCCcHHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCH
Q 003947 620 WISSQMNRVRNGELYRYICDTKGAFVQPALY------EAFGLTVVEAMTCGLPTFATCNGGPAEIIVHGKSGFHIDPYKG 693 (784)
Q Consensus 620 flG~~~~~v~~~el~~~la~aadvfV~PS~~------E~fGltvlEAMA~GlPVIaT~~GG~~EiI~dg~~G~li~p~d~ 693 (784)
|.| .++.+++..+++. +|++++||.. |+||++++|||+||+|+|+|+.|+..+++.++.+|++++++|+
T Consensus 240 ~~g----~~~~~~l~~~~~~-adi~l~~s~~~~~~~~e~~~~~~~Ea~a~G~Pvi~~~~~~~~~~i~~~~~g~~~~~~~~ 314 (355)
T cd03799 240 LLG----AKSQEEVRELLRA-ADLFVLPSVTAADGDREGLPVVLMEAMAMGLPVISTDVSGIPELVEDGETGLLVPPGDP 314 (355)
T ss_pred ECC----cCChHHHHHHHHh-CCEEEecceecCCCCccCccHHHHHHHHcCCCEEecCCCCcchhhhCCCceEEeCCCCH
Confidence 999 6778899999995 9999999998 9999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHH
Q 003947 694 DQATGILVDFFEKCKVDPGHWDEISQGGLKRIQEKYTWKIYSERL 738 (784)
Q Consensus 694 e~lAe~I~~~l~~ll~dp~~~~~m~~~a~~~v~~~ytw~~~a~~l 738 (784)
++++++|.++ ++|++.+.+|+++|++++.++|||+..++++
T Consensus 315 ~~l~~~i~~~----~~~~~~~~~~~~~a~~~~~~~~s~~~~~~~l 355 (355)
T cd03799 315 EALADAIERL----LDDPELRREMGEAGRARVEEEFDIRKQAARL 355 (355)
T ss_pred HHHHHHHHHH----HhCHHHHHHHHHHHHHHHHHhcCHHHHhhcC
Confidence 9999999854 4799999999999999999999999998763
No 35
>cd03794 GT1_wbuB_like This family is most closely related to the GT1 family of glycosyltransferases. wbuB in E. coli is involved in the biosynthesis of the O26 O-antigen. It has been proposed to function as an N-acetyl-L-fucosamine (L-FucNAc) transferase.
Probab=100.00 E-value=1.7e-33 Score=305.70 Aligned_cols=387 Identities=18% Similarity=0.239 Sum_probs=270.9
Q ss_pred EEEEEccCccccccCccCCCCcccchhhhHHHHHHHHHHHHHHHHHcCCCcccceEEEecCCCCCCCCCcCcceeeecCc
Q 003947 256 NVVIFTPHGYFAQDNVLGYPDTGGQVVYILDQVRALENEMLLRIKQQGLDITPRILIITRLLPDAVGTTCGQRVEKVYGT 335 (784)
Q Consensus 256 kI~ivs~h~~~~~~~~lg~p~tGG~~vyv~d~~raLe~eLa~~L~~~GheV~~~i~VvTr~~~~~~g~~~~~~~e~v~~~ 335 (784)
||++++.+.+ |..||...++. .+++.|+++||+|+ +++............. ......
T Consensus 1 kIl~i~~~~~---------~~~~G~~~~~~--------~l~~~L~~~g~~v~----~~~~~~~~~~~~~~~~--~~~~~~ 57 (394)
T cd03794 1 KILILSQYFP---------PELGGGAFRTT--------ELAEELVKRGHEVT----VITGSPNYPSGKIYKG--YKREEV 57 (394)
T ss_pred CEEEEecccC---------CccCCcceeHH--------HHHHHHHhCCceEE----EEecCCCccccccccc--ceEEec
Confidence 6899997766 33488899999 55666789999999 8876533222111000 011223
Q ss_pred CCeEEEEccCCCCcccccccccccCChhhHHHHHHHHHHHHHHHcCCCceEEEEcCCCh--hHHHHHHHHhCCCcEEEEe
Q 003947 336 KYSDILRVPFRTEEGIVRKWISRFEVWPYLETFTEDVATEIIQELQCKPDLIIGNYSDG--NIVASLLAHKLDVTQCTIA 413 (784)
Q Consensus 336 ~~v~IlrvP~~~~~~~~~~~isr~~l~~yl~~f~~~~~~~i~~~~~~~pDIIh~~~~~~--~lva~llar~~gvp~V~t~ 413 (784)
.++++.+++...... ..+.. .+..+. .|.......+.. ...+||+||++.+.. ...+..+++..++|++.++
T Consensus 58 ~~~~~~~~~~~~~~~--~~~~~--~~~~~~-~~~~~~~~~~~~-~~~~~D~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 131 (394)
T cd03794 58 DGVRVHRVPLPPYKK--NGLLK--RLLNYL-SFALSALLALLK-RRRRPDVIIATSPPLLIALAALLLARLKGAPFVLEV 131 (394)
T ss_pred CCeEEEEEecCCCCc--cchHH--HHHhhh-HHHHHHHHHHHh-cccCCCEEEEcCChHHHHHHHHHHHHhcCCCEEEEe
Confidence 467777777644321 00000 011111 222222333321 256899999997332 4566667777799999999
Q ss_pred cCCcccCCCCCcchhhhccccccccchhhhhHHHhcccCEEEecChHhHhhccccccccccccccccccceeeecCCCCC
Q 003947 414 HALELTKYPDSDINWKKLDDKYHFSCQFTADLFAMNRTDFIITSTFQEIAGSKDTVGQYESHTAFSLPGLYRVVNGIDAF 493 (784)
Q Consensus 414 H~l~~~k~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~~~~~~~~~~vgqYe~~~~f~~p~l~~~~~gi~~f 493 (784)
|+++............. ...+.+. ...++..++.+|.++++|+...+... ..++.
T Consensus 132 h~~~~~~~~~~~~~~~~-~~~~~~~--~~~~~~~~~~~d~vi~~s~~~~~~~~--------------------~~~~~-- 186 (394)
T cd03794 132 RDLWPESAVALGLLKNG-SLLYRLL--RKLERLIYRRADAIVVISPGMREYLV--------------------RRGVP-- 186 (394)
T ss_pred hhhcchhHHHccCcccc-chHHHHH--HHHHHHHHhcCCEEEEECHHHHHHHH--------------------hcCCC--
Confidence 98754321111000000 0000111 12355678999999999988776221 11222
Q ss_pred CCceEEecCCCCCCCCCCCcHHHHhhhcchhhhHHhhcCchhhhhhhccccCCCCCEEEEEecccCCCChHHHHHHHHHh
Q 003947 494 DPKFNIVSPGADMTIYFPYMEEKRRLKHFHSEIEELLYSPVENKEHLCVLKDSSKPILFTMARLDRVKNLTGLVEWYGKN 573 (784)
Q Consensus 494 ~~k~~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~~gll~~~~k~iIl~vGRL~~~Kgi~~LieA~~~l 573 (784)
..++.++|||+|...+.+......+ ..... ..++++|+++|++.+.||++.+++++.++
T Consensus 187 ~~~~~~i~~~~~~~~~~~~~~~~~~-------------------~~~~~--~~~~~~i~~~G~~~~~k~~~~l~~~~~~l 245 (394)
T cd03794 187 PEKISVIPNGVDLELFKPPPADESL-------------------RKELG--LDDKFVVLYAGNIGRAQGLDTLLEAAALL 245 (394)
T ss_pred cCceEEcCCCCCHHHcCCccchhhh-------------------hhccC--CCCcEEEEEecCcccccCHHHHHHHHHHH
Confidence 6789999999998877665432210 11111 45678999999999999999999999999
Q ss_pred HccCCCeEEEEEeCCCCCCcccHHHHHHHHHHHHHHHhcCCCCcEEEccCcCCcCChhHHHHHHHccccEEEeCCCCCCC
Q 003947 574 AKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYGLIDTYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAF 653 (784)
Q Consensus 574 ~~~~~~v~LvIVG~g~~~~s~d~ee~~~~~~l~~li~~l~L~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~f 653 (784)
.+. ++++|+++|+++. .+.+.+.+...++ ++|.++| .++.+++..+++. +|++++|+..|++
T Consensus 246 ~~~-~~~~l~i~G~~~~-----------~~~~~~~~~~~~~-~~v~~~g----~~~~~~~~~~~~~-~di~i~~~~~~~~ 307 (394)
T cd03794 246 KDR-PDIRFLIVGDGPE-----------KEELKELAKALGL-DNVTFLG----RVPKEELPELLAA-ADVGLVPLKPGPA 307 (394)
T ss_pred hhc-CCeEEEEeCCccc-----------HHHHHHHHHHcCC-CcEEEeC----CCChHHHHHHHHh-hCeeEEeccCccc
Confidence 876 8899999998854 2445555556665 5799999 6778899999995 9999999998875
Q ss_pred -----cHHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHh
Q 003947 654 -----GLTVVEAMTCGLPTFATCNGGPAEIIVHGKSGFHIDPYKGDQATGILVDFFEKCKVDPGHWDEISQGGLKRIQEK 728 (784)
Q Consensus 654 -----GltvlEAMA~GlPVIaT~~GG~~EiI~dg~~G~li~p~d~e~lAe~I~~~l~~ll~dp~~~~~m~~~a~~~v~~~ 728 (784)
|++++|||+||+|||+|+.||..+++.++.+|++++++|+++++++|.+ +++|++.+++|++++++++.++
T Consensus 308 ~~~~~p~~~~Ea~~~G~pvi~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~i~~----~~~~~~~~~~~~~~~~~~~~~~ 383 (394)
T cd03794 308 FEGVSPSKLFEYMAAGKPVLASVDGESAELVEEAGAGLVVPPGDPEALAAAILE----LLDDPEERAEMGENGRRYVEEK 383 (394)
T ss_pred ccccCchHHHHHHHCCCcEEEecCCCchhhhccCCcceEeCCCCHHHHHHHHHH----HHhChHHHHHHHHHHHHHHHHh
Confidence 8889999999999999999999999999889999999999999999985 4479999999999999999889
Q ss_pred CCHHHHHHHHH
Q 003947 729 YTWKIYSERLL 739 (784)
Q Consensus 729 ytw~~~a~~ll 739 (784)
|||+.++++++
T Consensus 384 ~s~~~~~~~~~ 394 (394)
T cd03794 384 FSREKLAERLL 394 (394)
T ss_pred hcHHHHHHhcC
Confidence 99999998863
No 36
>cd03801 GT1_YqgM_like This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold.
Probab=100.00 E-value=2.9e-33 Score=300.01 Aligned_cols=374 Identities=22% Similarity=0.316 Sum_probs=271.4
Q ss_pred EEEEEccCccccccCccCCCCcccchhhhHHHHHHHHHHHHHHHHHcCCCcccceEEEecCCCCCCCCCcCcceeeecCc
Q 003947 256 NVVIFTPHGYFAQDNVLGYPDTGGQVVYILDQVRALENEMLLRIKQQGLDITPRILIITRLLPDAVGTTCGQRVEKVYGT 335 (784)
Q Consensus 256 kI~ivs~h~~~~~~~~lg~p~tGG~~vyv~d~~raLe~eLa~~L~~~GheV~~~i~VvTr~~~~~~g~~~~~~~e~v~~~ 335 (784)
||+++++... |..||...++. .|++.|.+.||+|. +++......... .....
T Consensus 1 kI~ii~~~~~---------~~~~G~~~~~~--------~l~~~L~~~g~~v~----i~~~~~~~~~~~------~~~~~- 52 (374)
T cd03801 1 KILLVTPEYP---------PSVGGAERHVL--------ELARALAARGHEVT----VLTPGDGGLPDE------EEVGG- 52 (374)
T ss_pred CeeEEecccC---------CccCcHhHHHH--------HHHHHHHhcCceEE----EEecCCCCCCce------eeecC-
Confidence 6889987765 23589999999 56666788999999 888664332110 00000
Q ss_pred CCeEEEEccCCCCcccccccccccCChhhHHHHHHHHHHHHHHHcCCCceEEEEcCCChhHHHHHHHHhCCCcEEEEecC
Q 003947 336 KYSDILRVPFRTEEGIVRKWISRFEVWPYLETFTEDVATEIIQELQCKPDLIIGNYSDGNIVASLLAHKLDVTQCTIAHA 415 (784)
Q Consensus 336 ~~v~IlrvP~~~~~~~~~~~isr~~l~~yl~~f~~~~~~~i~~~~~~~pDIIh~~~~~~~lva~llar~~gvp~V~t~H~ 415 (784)
......+... ..........+.......+. ..+||+||++++.........++..++|++.+.|+
T Consensus 53 --~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~---~~~~Dii~~~~~~~~~~~~~~~~~~~~~~i~~~h~ 117 (374)
T cd03801 53 --IVVVRPPPLL----------RVRRLLLLLLLALRLRRLLR---RERFDVVHAHDWLALLAAALAARLLGIPLVLTVHG 117 (374)
T ss_pred --cceecCCccc----------ccchhHHHHHHHHHHHHHhh---hcCCcEEEEechhHHHHHHHHHHhcCCcEEEEecc
Confidence 0000000000 00000011112222222222 44899999999887666557788889999999999
Q ss_pred CcccCCCCCcchhhhccccccccchhhhhHHHhcccCEEEecChHhHhhccccccccccccccccccceeeecCCCCCCC
Q 003947 416 LELTKYPDSDINWKKLDDKYHFSCQFTADLFAMNRTDFIITSTFQEIAGSKDTVGQYESHTAFSLPGLYRVVNGIDAFDP 495 (784)
Q Consensus 416 l~~~k~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~~~~~~~~~~vgqYe~~~~f~~p~l~~~~~gi~~f~~ 495 (784)
......... ...........+...++.+|.+++.|....+...+. .+.. ..
T Consensus 118 ~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~d~~i~~s~~~~~~~~~~-------------------~~~~--~~ 168 (374)
T cd03801 118 LEFGRPGNE--------LGLLLKLARALERRALRRADRIIAVSEATREELREL-------------------GGVP--PE 168 (374)
T ss_pred chhhccccc--------hhHHHHHHHHHHHHHHHhCCEEEEecHHHHHHHHhc-------------------CCCC--CC
Confidence 764332111 000001111234567899999999998877632221 1111 35
Q ss_pred ceEEecCCCCCCCCCCCcHHHHhhhcchhhhHHhhcCchhhhhhhccccCCCCCEEEEEecccCCCChHHHHHHHHHhHc
Q 003947 496 KFNIVSPGADMTIYFPYMEEKRRLKHFHSEIEELLYSPVENKEHLCVLKDSSKPILFTMARLDRVKNLTGLVEWYGKNAK 575 (784)
Q Consensus 496 k~~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~~gll~~~~k~iIl~vGRL~~~Kgi~~LieA~~~l~~ 575 (784)
++.++|||+|...+.+.. ...+ ..... ..+++.|+++|++.+.||++.+++++..+.+
T Consensus 169 ~~~~i~~~~~~~~~~~~~-~~~~-------------------~~~~~--~~~~~~i~~~g~~~~~k~~~~~i~~~~~~~~ 226 (374)
T cd03801 169 KITVIPNGVDTERFRPAP-RAAR-------------------RRLGI--PEDEPVILFVGRLVPRKGVDLLLEALAKLRK 226 (374)
T ss_pred cEEEecCcccccccCccc-hHHH-------------------hhcCC--cCCCeEEEEecchhhhcCHHHHHHHHHHHhh
Confidence 899999999998876643 1110 01111 4567899999999999999999999999988
Q ss_pred cCCCeEEEEEeCCCCCCcccHHHHHHHHHHHHHHHhcCCCCcEEEccCcCCcCChhHHHHHHHccccEEEeCCCCCCCcH
Q 003947 576 LRELVNLVVVGGDRRKESKDLEEQAEMKKMYGLIDTYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGL 655 (784)
Q Consensus 576 ~~~~v~LvIVG~g~~~~s~d~ee~~~~~~l~~li~~l~L~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGl 655 (784)
..++++|+++|++. ..+.+.+.+++++..++|.++| .++.+++..+++. +|++++|+..|++|+
T Consensus 227 ~~~~~~l~i~G~~~-----------~~~~~~~~~~~~~~~~~v~~~g----~~~~~~~~~~~~~-~di~i~~~~~~~~~~ 290 (374)
T cd03801 227 EYPDVRLVIVGDGP-----------LREELEALAAELGLGDRVTFLG----FVPDEDLPALYAA-ADVFVLPSLYEGFGL 290 (374)
T ss_pred hcCCeEEEEEeCcH-----------HHHHHHHHHHHhCCCcceEEEe----ccChhhHHHHHHh-cCEEEecchhccccc
Confidence 77899999999773 3456677778889999999999 6777899999996 999999999999999
Q ss_pred HHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHH
Q 003947 656 TVVEAMTCGLPTFATCNGGPAEIIVHGKSGFHIDPYKGDQATGILVDFFEKCKVDPGHWDEISQGGLKRIQEKYTWKIYS 735 (784)
Q Consensus 656 tvlEAMA~GlPVIaT~~GG~~EiI~dg~~G~li~p~d~e~lAe~I~~~l~~ll~dp~~~~~m~~~a~~~v~~~ytw~~~a 735 (784)
+++|||+||+|||+++.++..+++.++.+|+++++.|+++++++|.+ +++|++.+.+|++++++.+.+.|||+.++
T Consensus 291 ~~~Ea~~~g~pvI~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~i~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 366 (374)
T cd03801 291 VLLEAMAAGLPVVASDVGGIPEVVEDGETGLLVPPGDPEALAEAILR----LLDDPELRRRLGEAARERVAERFSWDRVA 366 (374)
T ss_pred hHHHHHHcCCcEEEeCCCChhHHhcCCcceEEeCCCCHHHHHHHHHH----HHcChHHHHHHHHHHHHHHHHhcCHHHHH
Confidence 99999999999999999999999999999999999999999999974 45799999999999999999999999999
Q ss_pred HHHHHHHH
Q 003947 736 ERLLNLSG 743 (784)
Q Consensus 736 ~~ll~ly~ 743 (784)
+++.++|+
T Consensus 367 ~~~~~~~~ 374 (374)
T cd03801 367 ARTEEVYY 374 (374)
T ss_pred HHHHHhhC
Confidence 99999863
No 37
>cd03813 GT1_like_3 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=100.00 E-value=7.2e-35 Score=334.80 Aligned_cols=293 Identities=17% Similarity=0.222 Sum_probs=232.9
Q ss_pred CCCceEEEEcCCC-hhHHHHHHHHhCCCcEEEEecCCcccC----CCCCcchhhhccccc-cccchhhhhHHHhcccCEE
Q 003947 381 QCKPDLIIGNYSD-GNIVASLLAHKLDVTQCTIAHALELTK----YPDSDINWKKLDDKY-HFSCQFTADLFAMNRTDFI 454 (784)
Q Consensus 381 ~~~pDIIh~~~~~-~~lva~llar~~gvp~V~t~H~l~~~k----~~~s~~~~~~~~~~y-~~~~~~~~e~~a~~~AD~I 454 (784)
..++||||+|+.. .++++.++++..++|+|+|.|+..... ..........+...+ ++. ...++.+++.||.|
T Consensus 171 ~~~~dviH~~s~~~~g~~~~~~~~~~~~p~I~t~Hg~~~~e~~~~~~~~~~~~~~~~~~~~~~~--~~l~~~~~~~ad~I 248 (475)
T cd03813 171 LPKADVYHAVSTGYAGLLGALAKARRGTPFLLTEHGIYTRERKIELLQADWEMSYFRRLWIRFF--ESLGRLAYQAADRI 248 (475)
T ss_pred CCCCCEEeccCcchHHHHHHHHHHHhCCCEEEecCCccHHHHHHHHHhcccchHHHHHHHHHHH--HHHHHHHHHhCCEE
Confidence 3578999999754 467888889999999999999864311 000000000000000 111 12355678999999
Q ss_pred EecChHhHhhccccccccccccccccccceeeecCCCCCCCceEEecCCCCCCCCCCCcHHHHhhhcchhhhHHhhcCch
Q 003947 455 ITSTFQEIAGSKDTVGQYESHTAFSLPGLYRVVNGIDAFDPKFNIVSPGADMTIYFPYMEEKRRLKHFHSEIEELLYSPV 534 (784)
Q Consensus 455 It~S~~~~~~~~~~vgqYe~~~~f~~p~l~~~~~gi~~f~~k~~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~ 534 (784)
+++|....+.. ...|++ ..|+.|||||+|.+.|.+.....
T Consensus 249 i~~s~~~~~~~--------------------~~~g~~--~~ki~vIpNgid~~~f~~~~~~~------------------ 288 (475)
T cd03813 249 TTLYEGNRERQ--------------------IEDGAD--PEKIRVIPNGIDPERFAPARRAR------------------ 288 (475)
T ss_pred EecCHHHHHHH--------------------HHcCCC--HHHeEEeCCCcCHHHcCCccccc------------------
Confidence 99998765411 112443 67999999999998887643210
Q ss_pred hhhhhhccccCCCCCEEEEEecccCCCChHHHHHHHHHhHccCCCeEEEEEeCCCCCCcccHHHHHHHHHHHHHHHhcCC
Q 003947 535 ENKEHLCVLKDSSKPILFTMARLDRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYGLIDTYKL 614 (784)
Q Consensus 535 ~~~~~~gll~~~~k~iIl~vGRL~~~Kgi~~LieA~~~l~~~~~~v~LvIVG~g~~~~s~d~ee~~~~~~l~~li~~l~L 614 (784)
.++++++|+++||+.+.||++.+++|++.+.+..++++|+|+|+++. ..++.++++++++++++
T Consensus 289 ---------~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~p~~~l~IvG~g~~-------~~~~~~e~~~li~~l~l 352 (475)
T cd03813 289 ---------PEKEPPVVGLIGRVVPIKDIKTFIRAAAIVRKKIPDAEGWVIGPTDE-------DPEYAEECRELVESLGL 352 (475)
T ss_pred ---------cCCCCcEEEEEeccccccCHHHHHHHHHHHHHhCCCeEEEEECCCCc-------ChHHHHHHHHHHHHhCC
Confidence 13567899999999999999999999999988889999999999853 12456778899999999
Q ss_pred CCcEEEccCcCCcCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcCcccccccccc------CceEEEE
Q 003947 615 NGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCNGGPAEIIVH------GKSGFHI 688 (784)
Q Consensus 615 ~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMA~GlPVIaT~~GG~~EiI~d------g~~G~li 688 (784)
.++|+|+| . .++..+++. +|++|+||..|+||++++||||||+|||+|+.||+.|++.+ |.+|+++
T Consensus 353 ~~~V~f~G----~---~~v~~~l~~-aDv~vlpS~~Eg~p~~vlEAma~G~PVVatd~g~~~elv~~~~~~~~g~~G~lv 424 (475)
T cd03813 353 EDNVKFTG----F---QNVKEYLPK-LDVLVLTSISEGQPLVILEAMAAGIPVVATDVGSCRELIEGADDEALGPAGEVV 424 (475)
T ss_pred CCeEEEcC----C---ccHHHHHHh-CCEEEeCchhhcCChHHHHHHHcCCCEEECCCCChHHHhcCCcccccCCceEEE
Confidence 99999999 1 357778884 99999999999999999999999999999999999999998 6799999
Q ss_pred CCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Q 003947 689 DPYKGDQATGILVDFFEKCKVDPGHWDEISQGGLKRIQEKYTWKIYSERLLNLSG 743 (784)
Q Consensus 689 ~p~d~e~lAe~I~~~l~~ll~dp~~~~~m~~~a~~~v~~~ytw~~~a~~ll~ly~ 743 (784)
+|.|+++++++|.+ +++|++.+++|+++|++++.+.|+|+.++++|.++|+
T Consensus 425 ~~~d~~~la~ai~~----ll~~~~~~~~~~~~a~~~v~~~~s~~~~~~~y~~lY~ 475 (475)
T cd03813 425 PPADPEALARAILR----LLKDPELRRAMGEAGRKRVERYYTLERMIDSYRRLYL 475 (475)
T ss_pred CCCCHHHHHHHHHH----HhcCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHhC
Confidence 99999999999984 5589999999999999999999999999999999984
No 38
>cd03795 GT1_like_4 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP-linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=100.00 E-value=1.6e-33 Score=306.93 Aligned_cols=354 Identities=19% Similarity=0.219 Sum_probs=255.2
Q ss_pred EEEEEccCccccccCccCCCCcccchhhhHHHHHHHHHHHHHHHHHcCCCcccceEEEecCCCCCCCCCcCcceeeecCc
Q 003947 256 NVVIFTPHGYFAQDNVLGYPDTGGQVVYILDQVRALENEMLLRIKQQGLDITPRILIITRLLPDAVGTTCGQRVEKVYGT 335 (784)
Q Consensus 256 kI~ivs~h~~~~~~~~lg~p~tGG~~vyv~d~~raLe~eLa~~L~~~GheV~~~i~VvTr~~~~~~g~~~~~~~e~v~~~ 335 (784)
||+++++..+ |+.||.+.++. +|+++|.++||+|+ |++........ .. ..
T Consensus 1 kil~i~~~~~---------p~~gG~~~~~~--------~l~~~L~~~g~~v~----v~~~~~~~~~~------~~---~~ 50 (357)
T cd03795 1 RVLHVGKFYP---------PDRGGIEQVIR--------DLAEGLAARGIEVA----VLCASPEPKGR------DE---ER 50 (357)
T ss_pred CeeEecCCCC---------CCCCcHHHHHH--------HHHHHHHhCCCceE----EEecCCCCcch------hh---hc
Confidence 6899987665 45799999999 66667799999999 88765332111 01 11
Q ss_pred CCeEEEEccCCCCcccccccccccCChhhHHHHHHHHHHHHHHHcCCCceEEEEcCCChhHHHHHHHHhCCCcEEEEecC
Q 003947 336 KYSDILRVPFRTEEGIVRKWISRFEVWPYLETFTEDVATEIIQELQCKPDLIIGNYSDGNIVASLLAHKLDVTQCTIAHA 415 (784)
Q Consensus 336 ~~v~IlrvP~~~~~~~~~~~isr~~l~~yl~~f~~~~~~~i~~~~~~~pDIIh~~~~~~~lva~llar~~gvp~V~t~H~ 415 (784)
.+..+.+++...... ..+... .....+. ....+||+||+|++.............++|.+.+.|+
T Consensus 51 ~~~~~~~~~~~~~~~----------~~~~~~----~~~~~~~-~~~~~~Dii~~~~~~~~~~~~~~~~~~~~~~i~~~h~ 115 (357)
T cd03795 51 NGHRVIRAPSLLNVA----------STPFSP----SFFKQLK-KLAKKADVIHLHFPNPLADLALLLLPRKKPVVVHWHS 115 (357)
T ss_pred cCceEEEeecccccc----------cccccH----HHHHHHH-hcCCCCCEEEEecCcchHHHHHHHhccCceEEEEEcC
Confidence 234555554322110 001100 1111111 2256899999998765333333333368899999996
Q ss_pred CcccCCCCCcchhhhccccccccchhhhhHHHhcccCEEEecChHhHhhccccccccccccccccccceeeecCCCCCCC
Q 003947 416 LELTKYPDSDINWKKLDDKYHFSCQFTADLFAMNRTDFIITSTFQEIAGSKDTVGQYESHTAFSLPGLYRVVNGIDAFDP 495 (784)
Q Consensus 416 l~~~k~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~~~~~~~~~~vgqYe~~~~f~~p~l~~~~~gi~~f~~ 495 (784)
..... . .....+. ..++..++.||.|+++|+...+..... ..+..
T Consensus 116 ~~~~~----~----~~~~~~~-----~~~~~~~~~~d~vi~~s~~~~~~~~~~----------------------~~~~~ 160 (357)
T cd03795 116 DIVKQ----K----LLLKLYR-----PLQRRFLRRADAIVATSPNYAETSPVL----------------------RRFRD 160 (357)
T ss_pred hhhcc----c----hhhhhhh-----HHHHHHHHhcCEEEeCcHHHHHHHHHh----------------------cCCcc
Confidence 42111 0 0011111 124457899999999998765521111 11146
Q ss_pred ceEEecCCCCCCCCCCCcHHHHhhhcchhhhHHhhcCchhhhhhhccccCCCCCEEEEEecccCCCChHHHHHHHHHhHc
Q 003947 496 KFNIVSPGADMTIYFPYMEEKRRLKHFHSEIEELLYSPVENKEHLCVLKDSSKPILFTMARLDRVKNLTGLVEWYGKNAK 575 (784)
Q Consensus 496 k~~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~~gll~~~~k~iIl~vGRL~~~Kgi~~LieA~~~l~~ 575 (784)
++.+||||+|.+.+.+...... ..... ..++++|+++||+.+.||++.+++|+.++.
T Consensus 161 ~~~~i~~gi~~~~~~~~~~~~~--------------------~~~~~--~~~~~~i~~~G~~~~~K~~~~li~a~~~l~- 217 (357)
T cd03795 161 KVRVIPLGLDPARYPRPDALEE--------------------AIWRR--AAGRPFFLFVGRLVYYKGLDVLLEAAAALP- 217 (357)
T ss_pred ceEEecCCCChhhcCCcchhhh--------------------HhhcC--CCCCcEEEEecccccccCHHHHHHHHHhcc-
Confidence 8899999999987766432211 00111 456789999999999999999999999886
Q ss_pred cCCCeEEEEEeCCCCCCcccHHHHHHHHHHHHHHHhcCCCCcEEEccCcCCcCChhHHHHHHHccccEEEeCCC--CCCC
Q 003947 576 LRELVNLVVVGGDRRKESKDLEEQAEMKKMYGLIDTYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPAL--YEAF 653 (784)
Q Consensus 576 ~~~~v~LvIVG~g~~~~s~d~ee~~~~~~l~~li~~l~L~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~--~E~f 653 (784)
+++|+|+|+|+. .+.+.+.++++++.++|.|+| .++.+++.++++. +|++++||. .|+|
T Consensus 218 ---~~~l~i~G~g~~-----------~~~~~~~~~~~~~~~~V~~~g----~v~~~~~~~~~~~-ad~~i~ps~~~~e~~ 278 (357)
T cd03795 218 ---DAPLVIVGEGPL-----------EAELEALAAALGLLDRVRFLG----RLDDEEKAALLAA-CDVFVFPSVERSEAF 278 (357)
T ss_pred ---CcEEEEEeCChh-----------HHHHHHHHHhcCCcceEEEcC----CCCHHHHHHHHHh-CCEEEeCCccccccc
Confidence 799999999843 356777888899999999999 7778899999995 999999996 6999
Q ss_pred cHHHHHHHHcCCcEEEcCcccccccccc-CceEEEECCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHH
Q 003947 654 GLTVVEAMTCGLPTFATCNGGPAEIIVH-GKSGFHIDPYKGDQATGILVDFFEKCKVDPGHWDEISQGGLKRIQEKYTWK 732 (784)
Q Consensus 654 GltvlEAMA~GlPVIaT~~GG~~EiI~d-g~~G~li~p~d~e~lAe~I~~~l~~ll~dp~~~~~m~~~a~~~v~~~ytw~ 732 (784)
|++++|||+||+|||+|+.|+..+.+.+ +.+|++++++|+++++++|.+ +++||+.+++|+++|++++.++|||+
T Consensus 279 g~~~~Ea~~~g~Pvi~~~~~~~~~~i~~~~~~g~~~~~~d~~~~~~~i~~----l~~~~~~~~~~~~~~~~~~~~~~s~~ 354 (357)
T cd03795 279 GIVLLEAMAFGKPVISTEIGTGGSYVNLHGVTGLVVPPGDPAALAEAIRR----LLEDPELRERLGEAARERAEEEFTAD 354 (357)
T ss_pred chHHHHHHHcCCCEEecCCCCchhHHhhCCCceEEeCCCCHHHHHHHHHH----HHHCHHHHHHHHHHHHHHHHHhcchH
Confidence 9999999999999999999999999886 899999999999999999985 45799999999999999999999999
Q ss_pred HHH
Q 003947 733 IYS 735 (784)
Q Consensus 733 ~~a 735 (784)
.++
T Consensus 355 ~~~ 357 (357)
T cd03795 355 RMV 357 (357)
T ss_pred hhC
Confidence 864
No 39
>cd03802 GT1_AviGT4_like This family is most closely related to the GT1 family of glycosyltransferases. aviGT4 in Streptomyces viridochromogenes has been shown to be involved in biosynthesis of oligosaccharide antibiotic avilamycin A. Inactivation of aviGT4 resulted in a mutant that accumulated a novel avilamycin derivative lacking the terminal eurekanate residue.
Probab=100.00 E-value=2.4e-33 Score=303.69 Aligned_cols=333 Identities=16% Similarity=0.162 Sum_probs=236.8
Q ss_pred eEEEEEccCccccccCccCCCCcccchhhhHHHHHHHHHHHHHHHHHcCCCcccceEEEecCCCCCCCCCcCcceeeecC
Q 003947 255 FNVVIFTPHGYFAQDNVLGYPDTGGQVVYILDQVRALENEMLLRIKQQGLDITPRILIITRLLPDAVGTTCGQRVEKVYG 334 (784)
Q Consensus 255 mkI~ivs~h~~~~~~~~lg~p~tGG~~vyv~d~~raLe~eLa~~L~~~GheV~~~i~VvTr~~~~~~g~~~~~~~e~v~~ 334 (784)
|||+++++..++- +.|..||.+.++. +|++.|.++||+|+ +++...+.... ..
T Consensus 1 MkI~~i~~~~~~~-----~~~~~GG~~~~~~--------~l~~~L~~~g~~V~----v~~~~~~~~~~-----~~----- 53 (335)
T cd03802 1 MRIALVAPPREPV-----PPPAYGGTERVVA--------ALTEGLVARGHEVT----LFASGDSKTAA-----PL----- 53 (335)
T ss_pred CeEEEEcCCcccC-----CCcccCcHHHHHH--------HHHHHHHhcCceEE----EEecCCCCccc-----ce-----
Confidence 7999999876531 3467899999999 55566699999999 88865332110 00
Q ss_pred cCCeEEEEccCCCCcccccccccccCChhhHHHHHHHHHHHHHHHcCCCceEEEEcCCChhHHHHHHHHhCCCcEEEEec
Q 003947 335 TKYSDILRVPFRTEEGIVRKWISRFEVWPYLETFTEDVATEIIQELQCKPDLIIGNYSDGNIVASLLAHKLDVTQCTIAH 414 (784)
Q Consensus 335 ~~~v~IlrvP~~~~~~~~~~~isr~~l~~yl~~f~~~~~~~i~~~~~~~pDIIh~~~~~~~lva~llar~~gvp~V~t~H 414 (784)
....+.+... ...............+.+ +.+ ..+|||||+|...+... +++..++|+|.+.|
T Consensus 54 ---~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~-~~~--~~~~Divh~~~~~~~~~---~~~~~~~~~v~~~h 115 (335)
T cd03802 54 ---VPVVPEPLRL---------DAPGRDRAEAEALALAER-ALA--AGDFDIVHNHSLHLPLP---FARPLPVPVVTTLH 115 (335)
T ss_pred ---eeccCCCccc---------ccchhhHhhHHHHHHHHH-HHh--cCCCCEEEecCcccchh---hhcccCCCEEEEec
Confidence 0110001000 000000001111112222 222 45899999999887554 57778999999999
Q ss_pred CCcccCCCCCcchhhhccccccccchhhhhHHHhcccCEEEecChHhHhhccccccccccccccccccceeeecCCCCCC
Q 003947 415 ALELTKYPDSDINWKKLDDKYHFSCQFTADLFAMNRTDFIITSTFQEIAGSKDTVGQYESHTAFSLPGLYRVVNGIDAFD 494 (784)
Q Consensus 415 ~l~~~k~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~~~~~~~~~~vgqYe~~~~f~~p~l~~~~~gi~~f~ 494 (784)
+...... .+ .......++.++++|....+. . .. .
T Consensus 116 ~~~~~~~-----~~---------------~~~~~~~~~~~~~~s~~~~~~-------------------~-----~~--~ 149 (335)
T cd03802 116 GPPDPEL-----LK---------------LYYAARPDVPFVSISDAQRRP-------------------W-----PP--L 149 (335)
T ss_pred CCCCccc-----ch---------------HHHhhCcCCeEEEecHHHHhh-------------------c-----cc--c
Confidence 8643210 00 113466788899998776541 0 01 1
Q ss_pred CceEEecCCCCCCCCCCCcHHHHhhhcchhhhHHhhcCchhhhhhhccccCCCCCEEEEEecccCCCChHHHHHHHHHhH
Q 003947 495 PKFNIVSPGADMTIYFPYMEEKRRLKHFHSEIEELLYSPVENKEHLCVLKDSSKPILFTMARLDRVKNLTGLVEWYGKNA 574 (784)
Q Consensus 495 ~k~~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~~gll~~~~k~iIl~vGRL~~~Kgi~~LieA~~~l~ 574 (784)
.++.+||||+|.+.|.+. ..+++.|+++||+.+.||++.+++++.+
T Consensus 150 ~~~~vi~ngvd~~~~~~~--------------------------------~~~~~~i~~~Gr~~~~Kg~~~li~~~~~-- 195 (335)
T cd03802 150 PWVATVHNGIDLDDYPFR--------------------------------GPKGDYLLFLGRISPEKGPHLAIRAARR-- 195 (335)
T ss_pred cccEEecCCcChhhCCCC--------------------------------CCCCCEEEEEEeeccccCHHHHHHHHHh--
Confidence 578999999999877651 2346789999999999999999999765
Q ss_pred ccCCCeEEEEEeCCCCCCcccHHHHHHHHHHHHHHHhcC-CCCcEEEccCcCCcCChhHHHHHHHccccEEEeCCC-CCC
Q 003947 575 KLRELVNLVVVGGDRRKESKDLEEQAEMKKMYGLIDTYK-LNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPAL-YEA 652 (784)
Q Consensus 575 ~~~~~v~LvIVG~g~~~~s~d~ee~~~~~~l~~li~~l~-L~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~-~E~ 652 (784)
.+++|+++|++... +.+...+.+.. +.++|.|+| .++..++..+++. +|++|+||. .|+
T Consensus 196 ---~~~~l~i~G~~~~~-----------~~~~~~~~~~~~~~~~v~~~G----~~~~~~~~~~~~~-~d~~v~ps~~~E~ 256 (335)
T cd03802 196 ---AGIPLKLAGPVSDP-----------DYFYREIAPELLDGPDIEYLG----EVGGAEKAELLGN-ARALLFPILWEEP 256 (335)
T ss_pred ---cCCeEEEEeCCCCH-----------HHHHHHHHHhcccCCcEEEeC----CCCHHHHHHHHHh-CcEEEeCCcccCC
Confidence 36899999999641 22233333332 568999999 6777899999995 999999997 599
Q ss_pred CcHHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHH
Q 003947 653 FGLTVVEAMTCGLPTFATCNGGPAEIIVHGKSGFHIDPYKGDQATGILVDFFEKCKVDPGHWDEISQGGLKRIQEKYTWK 732 (784)
Q Consensus 653 fGltvlEAMA~GlPVIaT~~GG~~EiI~dg~~G~li~p~d~e~lAe~I~~~l~~ll~dp~~~~~m~~~a~~~v~~~ytw~ 732 (784)
||++++||||||+|||+|+.||..|++.++.+|+++++ +++++++|.++. ..+ .+++++++.++|||+
T Consensus 257 ~~~~~lEAma~G~PvI~~~~~~~~e~i~~~~~g~l~~~--~~~l~~~l~~l~----~~~------~~~~~~~~~~~~s~~ 324 (335)
T cd03802 257 FGLVMIEAMACGTPVIAFRRGAVPEVVEDGVTGFLVDS--VEELAAAVARAD----RLD------RAACRRRAERRFSAA 324 (335)
T ss_pred cchHHHHHHhcCCCEEEeCCCCchhheeCCCcEEEeCC--HHHHHHHHHHHh----ccH------HHHHHHHHHHhCCHH
Confidence 99999999999999999999999999999999999986 899999997543 332 346788888999999
Q ss_pred HHHHHHHHHHH
Q 003947 733 IYSERLLNLSG 743 (784)
Q Consensus 733 ~~a~~ll~ly~ 743 (784)
.++++++++|+
T Consensus 325 ~~~~~~~~~y~ 335 (335)
T cd03802 325 RMVDDYLALYR 335 (335)
T ss_pred HHHHHHHHHhC
Confidence 99999999984
No 40
>cd03814 GT1_like_2 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=100.00 E-value=1.8e-33 Score=305.32 Aligned_cols=363 Identities=20% Similarity=0.291 Sum_probs=258.9
Q ss_pred EEEEEccCccccccCccCCCCcccchhhhHHHHHHHHHHHHHHHHHcCCCcccceEEEecCCCCCCCCCcCcceeeecCc
Q 003947 256 NVVIFTPHGYFAQDNVLGYPDTGGQVVYILDQVRALENEMLLRIKQQGLDITPRILIITRLLPDAVGTTCGQRVEKVYGT 335 (784)
Q Consensus 256 kI~ivs~h~~~~~~~~lg~p~tGG~~vyv~d~~raLe~eLa~~L~~~GheV~~~i~VvTr~~~~~~g~~~~~~~e~v~~~ 335 (784)
||+++++... |..||.+.++. .|+++|+++||+|+ ++|......... ..
T Consensus 1 kIl~i~~~~~---------p~~~G~~~~~~--------~l~~~L~~~g~~v~----~~~~~~~~~~~~--~~-------- 49 (364)
T cd03814 1 RIAIVTDTFL---------PQVNGVVRTLQ--------RLVEHLRARGHEVL----VIAPGPFRESEG--PA-------- 49 (364)
T ss_pred CeEEEecccC---------ccccceehHHH--------HHHHHHHHCCCEEE----EEeCCchhhccC--CC--------
Confidence 6899987664 45589899988 66667799999999 888653321110 00
Q ss_pred CCeEEEEccCCCCcccccccccccCChhhHHHHHHHHHHHHHHHcCCCceEEEEcCCCh-hHHHHHHHHhCCCcEEEEec
Q 003947 336 KYSDILRVPFRTEEGIVRKWISRFEVWPYLETFTEDVATEIIQELQCKPDLIIGNYSDG-NIVASLLAHKLDVTQCTIAH 414 (784)
Q Consensus 336 ~~v~IlrvP~~~~~~~~~~~isr~~l~~yl~~f~~~~~~~i~~~~~~~pDIIh~~~~~~-~lva~llar~~gvp~V~t~H 414 (784)
....+...+......+ +..+.. ...+.+.+. ..+||+||++.... ++.+..++++.++|++.+.|
T Consensus 50 ~~~~~~~~~~~~~~~~------~~~~~~-----~~~~~~~~~---~~~pdii~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 115 (364)
T cd03814 50 RVVPVPSVPLPGYPEI------RLALPP-----RRRVRRLLD---AFAPDVVHIATPGPLGLAALRAARRLGIPVVTSYH 115 (364)
T ss_pred CceeecccccCcccce------Eecccc-----hhhHHHHHH---hcCCCEEEEeccchhhHHHHHHHHHcCCCEEEEEe
Confidence 1122222221111110 000000 011122222 44899999986654 56677788889999999999
Q ss_pred CCcccCCCCCcchhhhccccccccchhhhhHHHhcccCEEEecChHhHhhccccccccccccccccccceeeecCCCCCC
Q 003947 415 ALELTKYPDSDINWKKLDDKYHFSCQFTADLFAMNRTDFIITSTFQEIAGSKDTVGQYESHTAFSLPGLYRVVNGIDAFD 494 (784)
Q Consensus 415 ~l~~~k~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~~~~~~~~~~vgqYe~~~~f~~p~l~~~~~gi~~f~ 494 (784)
+......... ..... ..+. ....+...+.+|.+++.|....+... ... .
T Consensus 116 ~~~~~~~~~~--~~~~~---~~~~--~~~~~~~~~~~d~i~~~s~~~~~~~~----------------------~~~--~ 164 (364)
T cd03814 116 TDFPEYLRYY--GLGPL---SWLA--WAYLRWFHNRADRVLVPSPSLADELR----------------------ARG--F 164 (364)
T ss_pred cChHHHhhhc--ccchH---hHhh--HHHHHHHHHhCCEEEeCCHHHHHHHh----------------------ccC--C
Confidence 7643211000 00000 0000 12234567899999999987765110 011 4
Q ss_pred CceEEecCCCCCCCCCCCcHHHHhhhcchhhhHHhhcCchhhhhhhccccCCCCCEEEEEecccCCCChHHHHHHHHHhH
Q 003947 495 PKFNIVSPGADMTIYFPYMEEKRRLKHFHSEIEELLYSPVENKEHLCVLKDSSKPILFTMARLDRVKNLTGLVEWYGKNA 574 (784)
Q Consensus 495 ~k~~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~~gll~~~~k~iIl~vGRL~~~Kgi~~LieA~~~l~ 574 (784)
.++.+++||+|.+.|.+....... ++.++ ..++++|+++|++.+.||++.+++++.++.
T Consensus 165 ~~~~~~~~g~~~~~~~~~~~~~~~------------------~~~~~---~~~~~~i~~~G~~~~~k~~~~~i~~~~~l~ 223 (364)
T cd03814 165 RRVRLWPRGVDTELFHPRRRDEAL------------------RARLG---PPDRPVLLYVGRLAPEKNLEALLDADLPLR 223 (364)
T ss_pred CceeecCCCccccccCcccccHHH------------------HHHhC---CCCCeEEEEEeccccccCHHHHHHHHHHhh
Confidence 578999999999888765432211 11222 346788999999999999999999999998
Q ss_pred ccCCCeEEEEEeCCCCCCcccHHHHHHHHHHHHHHHhcCCCCcEEEccCcCCcCChhHHHHHHHccccEEEeCCCCCCCc
Q 003947 575 KLRELVNLVVVGGDRRKESKDLEEQAEMKKMYGLIDTYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFG 654 (784)
Q Consensus 575 ~~~~~v~LvIVG~g~~~~s~d~ee~~~~~~l~~li~~l~L~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fG 654 (784)
+. ++++|+++|+++.. +.++ +..++|.|+| .++.+++..+++. +|+++.||..|+||
T Consensus 224 ~~-~~~~l~i~G~~~~~-----------~~~~------~~~~~v~~~g----~~~~~~~~~~~~~-~d~~l~~s~~e~~~ 280 (364)
T cd03814 224 RR-PPVRLVIVGDGPAR-----------ARLE------ARYPNVHFLG----FLDGEELAAAYAS-ADVFVFPSRTETFG 280 (364)
T ss_pred hc-CCceEEEEeCCchH-----------HHHh------ccCCcEEEEe----ccCHHHHHHHHHh-CCEEEECcccccCC
Confidence 77 89999999988541 1121 4567899999 6778899999995 99999999999999
Q ss_pred HHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHH
Q 003947 655 LTVVEAMTCGLPTFATCNGGPAEIIVHGKSGFHIDPYKGDQATGILVDFFEKCKVDPGHWDEISQGGLKRIQEKYTWKIY 734 (784)
Q Consensus 655 ltvlEAMA~GlPVIaT~~GG~~EiI~dg~~G~li~p~d~e~lAe~I~~~l~~ll~dp~~~~~m~~~a~~~v~~~ytw~~~ 734 (784)
++++||||||+|||+++.|+..|++.++.+|++++++|.++++++|.+ ++.||+.+++|++++++.+ ++|+|+.+
T Consensus 281 ~~~lEa~a~g~PvI~~~~~~~~~~i~~~~~g~~~~~~~~~~l~~~i~~----l~~~~~~~~~~~~~~~~~~-~~~~~~~~ 355 (364)
T cd03814 281 LVVLEAMASGLPVVAPDAGGPADIVTDGENGLLVEPGDAEAFAAALAA----LLADPELRRRMAARARAEA-ERRSWEAF 355 (364)
T ss_pred cHHHHHHHcCCCEEEcCCCCchhhhcCCcceEEcCCCCHHHHHHHHHH----HHcCHHHHHHHHHHHHHHH-hhcCHHHH
Confidence 999999999999999999999999999899999999999999999974 4579999999999999998 88999999
Q ss_pred HHHHHHHHH
Q 003947 735 SERLLNLSG 743 (784)
Q Consensus 735 a~~ll~ly~ 743 (784)
+++++++|+
T Consensus 356 ~~~~~~~~~ 364 (364)
T cd03814 356 LDNLLEAYR 364 (364)
T ss_pred HHHHHHhhC
Confidence 999999873
No 41
>cd04951 GT1_WbdM_like This family is most closely related to the GT1 family of glycosyltransferases and is named after WbdM in Escherichia coli. In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have
Probab=100.00 E-value=2.7e-33 Score=305.60 Aligned_cols=282 Identities=21% Similarity=0.266 Sum_probs=219.0
Q ss_pred CCCceEEEEcCCChhHHHHHHHHhC-CCcEEEEecCCcccCCCCCcchhhhccccccccchhhhhHHHhcccCEEEecCh
Q 003947 381 QCKPDLIIGNYSDGNIVASLLAHKL-DVTQCTIAHALELTKYPDSDINWKKLDDKYHFSCQFTADLFAMNRTDFIITSTF 459 (784)
Q Consensus 381 ~~~pDIIh~~~~~~~lva~llar~~-gvp~V~t~H~l~~~k~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~ 459 (784)
..+||+||+|...+++.+.++++.. ++|++.+.|+..... .. ..+ ........++.++++|.
T Consensus 77 ~~~pdiv~~~~~~~~~~~~l~~~~~~~~~~v~~~h~~~~~~------~~------~~~-----~~~~~~~~~~~~~~~s~ 139 (360)
T cd04951 77 QFKPDVVHAHMFHANIFARLLRLFLPSPPLICTAHSKNEGG------RL------RML-----AYRLTDFLSDLTTNVSK 139 (360)
T ss_pred hcCCCEEEEcccchHHHHHHHHhhCCCCcEEEEeeccCchh------HH------HHH-----HHHHHhhccCceEEEcH
Confidence 4589999999988777666665543 578999999753210 00 001 11223445777888887
Q ss_pred HhHhhccccccccccccccccccceeeecCCCCCCCceEEecCCCCCCCCCCCcHHHHhhhcchhhhHHhhcCchhhhhh
Q 003947 460 QEIAGSKDTVGQYESHTAFSLPGLYRVVNGIDAFDPKFNIVSPGADMTIYFPYMEEKRRLKHFHSEIEELLYSPVENKEH 539 (784)
Q Consensus 460 ~~~~~~~~~vgqYe~~~~f~~p~l~~~~~gi~~f~~k~~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~ 539 (784)
...+...+ ..+++ ..++.+||||+|...|.+....... .++.
T Consensus 140 ~~~~~~~~-------------------~~~~~--~~~~~~i~ng~~~~~~~~~~~~~~~-----------------~~~~ 181 (360)
T cd04951 140 EALDYFIA-------------------SKAFN--ANKSFVVYNGIDTDRFRKDPARRLK-----------------IRNA 181 (360)
T ss_pred HHHHHHHh-------------------ccCCC--cccEEEEccccchhhcCcchHHHHH-----------------HHHH
Confidence 65542111 11222 5689999999999887665432221 2234
Q ss_pred hccccCCCCCEEEEEecccCCCChHHHHHHHHHhHccCCCeEEEEEeCCCCCCcccHHHHHHHHHHHHHHHhcCCCCcEE
Q 003947 540 LCVLKDSSKPILFTMARLDRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYGLIDTYKLNGQFR 619 (784)
Q Consensus 540 ~gll~~~~k~iIl~vGRL~~~Kgi~~LieA~~~l~~~~~~v~LvIVG~g~~~~s~d~ee~~~~~~l~~li~~l~L~~~V~ 619 (784)
+++ ++++++++++||+.+.||++.+++++.++.+..++++|+|+|+|+. .+.+.+.++++++.++|.
T Consensus 182 ~~~--~~~~~~~l~~g~~~~~kg~~~li~a~~~l~~~~~~~~l~i~G~g~~-----------~~~~~~~~~~~~~~~~v~ 248 (360)
T cd04951 182 LGV--KNDTFVILAVGRLVEAKDYPNLLKAFAKLLSDYLDIKLLIAGDGPL-----------RATLERLIKALGLSNRVK 248 (360)
T ss_pred cCc--CCCCEEEEEEeeCchhcCcHHHHHHHHHHHhhCCCeEEEEEcCCCc-----------HHHHHHHHHhcCCCCcEE
Confidence 555 5678899999999999999999999999988778999999999864 255777888889999999
Q ss_pred EccCcCCcCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHHHHHHH
Q 003947 620 WISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCNGGPAEIIVHGKSGFHIDPYKGDQATGI 699 (784)
Q Consensus 620 flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMA~GlPVIaT~~GG~~EiI~dg~~G~li~p~d~e~lAe~ 699 (784)
|+|.+ +++..+++. +|++|+||..|+||++++|||+||+|||+++.|+..|++++ +|+.++++|+++++++
T Consensus 249 ~~g~~------~~~~~~~~~-ad~~v~~s~~e~~~~~~~Ea~a~G~PvI~~~~~~~~e~i~~--~g~~~~~~~~~~~~~~ 319 (360)
T cd04951 249 LLGLR------DDIAAYYNA-ADLFVLSSAWEGFGLVVAEAMACELPVVATDAGGVREVVGD--SGLIVPISDPEALANK 319 (360)
T ss_pred Eeccc------ccHHHHHHh-hceEEecccccCCChHHHHHHHcCCCEEEecCCChhhEecC--CceEeCCCCHHHHHHH
Confidence 99943 367888885 99999999999999999999999999999999999999977 7999999999999999
Q ss_pred HHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Q 003947 700 LVDFFEKCKVDPGHWDEISQGGLKRIQEKYTWKIYSERLLNLSG 743 (784)
Q Consensus 700 I~~~l~~ll~dp~~~~~m~~~a~~~v~~~ytw~~~a~~ll~ly~ 743 (784)
|.++++ .+++.++.++++ ++.+.++|||+.++++++++|+
T Consensus 320 i~~ll~---~~~~~~~~~~~~-~~~~~~~~s~~~~~~~~~~~y~ 359 (360)
T cd04951 320 IDEILK---MSGEERDIIGAR-RERIVKKFSINSIVQQWLTLYT 359 (360)
T ss_pred HHHHHh---CCHHHHHHHHHH-HHHHHHhcCHHHHHHHHHHHhh
Confidence 985542 577777778776 8889999999999999999985
No 42
>cd03822 GT1_ecORF704_like This family is most closely related to the GT1 family of glycosyltransferases. ORF704 in E. coli has been shown to be involved in the biosynthesis of O-specific mannose homopolysaccharides.
Probab=100.00 E-value=6e-33 Score=301.85 Aligned_cols=358 Identities=18% Similarity=0.209 Sum_probs=250.2
Q ss_pred EEEEEccCccccccCccCCCCcccchhhhHHHHHHHHHHHHHHHHHcCCCcccceEEEecCCCCCCCCCcCcceeeecCc
Q 003947 256 NVVIFTPHGYFAQDNVLGYPDTGGQVVYILDQVRALENEMLLRIKQQGLDITPRILIITRLLPDAVGTTCGQRVEKVYGT 335 (784)
Q Consensus 256 kI~ivs~h~~~~~~~~lg~p~tGG~~vyv~d~~raLe~eLa~~L~~~GheV~~~i~VvTr~~~~~~g~~~~~~~e~v~~~ 335 (784)
||++|++.. |..||.+.++. +|+++|++.||+|. +++...+........ ..
T Consensus 1 kI~~v~~~~----------~~~gG~~~~~~--------~l~~~L~~~g~~v~----v~~~~~~~~~~~~~~-------~~ 51 (366)
T cd03822 1 RIALVSPYP----------PRKCGIATFTT--------DLVNALSARGPDVL----VVSVAALYPSLLYGG-------EQ 51 (366)
T ss_pred CeEEecCCC----------CCCCcHHHHHH--------HHHHHhhhcCCeEE----EEEeecccCcccCCC-------cc
Confidence 689998653 34699999999 66666799999998 776543221100000 00
Q ss_pred CCeEEEEccCCCCcccccccccccCChhhHHHHHHHHHHHHHHHcCCCceEEEEcCCCh---hH---HHHHHHHhCCCcE
Q 003947 336 KYSDILRVPFRTEEGIVRKWISRFEVWPYLETFTEDVATEIIQELQCKPDLIIGNYSDG---NI---VASLLAHKLDVTQ 409 (784)
Q Consensus 336 ~~v~IlrvP~~~~~~~~~~~isr~~l~~yl~~f~~~~~~~i~~~~~~~pDIIh~~~~~~---~l---va~llar~~gvp~ 409 (784)
....... ......+ ..+.+.+. ..+||+||++.+.+ .. ......+..++|+
T Consensus 52 ~~~~~~~---------------~~~~~~~-----~~~~~~~~---~~~~dii~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 108 (366)
T cd03822 52 EVVRVIV---------------LDNPLDY-----RRAARAIR---LSGPDVVVIQHEYGIFGGEAGLYLLLLLRGLGIPV 108 (366)
T ss_pred cceeeee---------------cCCchhH-----HHHHHHHh---hcCCCEEEEeeccccccchhhHHHHHHHhhcCCCE
Confidence 0000000 0000100 11222222 45899999977432 12 2222234589999
Q ss_pred EEEecCCcccCCCCCcchhhhccccccccchhhhhHHHhcccCEEEecChHhHhhccccccccccccccccccceeeecC
Q 003947 410 CTIAHALELTKYPDSDINWKKLDDKYHFSCQFTADLFAMNRTDFIITSTFQEIAGSKDTVGQYESHTAFSLPGLYRVVNG 489 (784)
Q Consensus 410 V~t~H~l~~~k~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~~~~~~~~~~vgqYe~~~~f~~p~l~~~~~g 489 (784)
|.+.|+..... . .+ .........++.+|.|+++|..... +..
T Consensus 109 i~~~h~~~~~~----~-~~----------~~~~~~~~~~~~~d~ii~~s~~~~~---~~~-------------------- 150 (366)
T cd03822 109 VVTLHTVLLHE----P-RP----------GDRALLRLLLRRADAVIVMSSELLR---ALL-------------------- 150 (366)
T ss_pred EEEEecCCccc----c-ch----------hhhHHHHHHHhcCCEEEEeeHHHHH---HHH--------------------
Confidence 99999861100 0 00 0111234568899999999733322 110
Q ss_pred CCCCCCceEEecCCCCCCCCCCCcHHHHhhhcchhhhHHhhcCchhhhhhhccccCCCCCEEEEEecccCCCChHHHHHH
Q 003947 490 IDAFDPKFNIVSPGADMTIYFPYMEEKRRLKHFHSEIEELLYSPVENKEHLCVLKDSSKPILFTMARLDRVKNLTGLVEW 569 (784)
Q Consensus 490 i~~f~~k~~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~~gll~~~~k~iIl~vGRL~~~Kgi~~LieA 569 (784)
......++.+||||+|...+.+..... ..+ ...++++|+++|++.+.||++.+++|
T Consensus 151 ~~~~~~~~~~i~~~~~~~~~~~~~~~~----------------------~~~--~~~~~~~i~~~G~~~~~K~~~~ll~a 206 (366)
T cd03822 151 LRAYPEKIAVIPHGVPDPPAEPPESLK----------------------ALG--GLDGRPVLLTFGLLRPYKGLELLLEA 206 (366)
T ss_pred hhcCCCcEEEeCCCCcCcccCCchhhH----------------------hhc--CCCCCeEEEEEeeccCCCCHHHHHHH
Confidence 011146999999999987665543211 011 14567899999999999999999999
Q ss_pred HHHhHccCCCeEEEEEeCCCCCCcccHHHHHHHHHHHHHHHhcCCCCcEEEccCcCCcCChhHHHHHHHccccEEEeCCC
Q 003947 570 YGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYGLIDTYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPAL 649 (784)
Q Consensus 570 ~~~l~~~~~~v~LvIVG~g~~~~s~d~ee~~~~~~l~~li~~l~L~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~ 649 (784)
+.++.+..++++|+++|++.... ........++++++++.++|.|+| +.++.+++..+++. +|++++||.
T Consensus 207 ~~~~~~~~~~~~l~i~G~~~~~~------~~~~~~~~~~i~~~~~~~~v~~~~---~~~~~~~~~~~~~~-ad~~v~ps~ 276 (366)
T cd03822 207 LPLLVAKHPDVRLLVAGETHPDL------ERYRGEAYALAERLGLADRVIFIN---RYLPDEELPELFSA-ADVVVLPYR 276 (366)
T ss_pred HHHHHhhCCCeEEEEeccCccch------hhhhhhhHhHHHhcCCCCcEEEec---CcCCHHHHHHHHhh-cCEEEeccc
Confidence 99998888899999999986510 000111114578889999999998 23778899999996 999999999
Q ss_pred CC--CCcHHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHH
Q 003947 650 YE--AFGLTVVEAMTCGLPTFATCNGGPAEIIVHGKSGFHIDPYKGDQATGILVDFFEKCKVDPGHWDEISQGGLKRIQE 727 (784)
Q Consensus 650 ~E--~fGltvlEAMA~GlPVIaT~~GG~~EiI~dg~~G~li~p~d~e~lAe~I~~~l~~ll~dp~~~~~m~~~a~~~v~~ 727 (784)
+| +||++++|||+||+|||+|+.|| .+.+.++.+|++++++|+++++++|.+ +++|++.+.+|++++++.+.+
T Consensus 277 ~e~~~~~~~~~Ea~a~G~PvI~~~~~~-~~~i~~~~~g~~~~~~d~~~~~~~l~~----l~~~~~~~~~~~~~~~~~~~~ 351 (366)
T cd03822 277 SADQTQSGVLAYAIGFGKPVISTPVGH-AEEVLDGGTGLLVPPGDPAALAEAIRR----LLADPELAQALRARAREYARA 351 (366)
T ss_pred ccccccchHHHHHHHcCCCEEecCCCC-hheeeeCCCcEEEcCCCHHHHHHHHHH----HHcChHHHHHHHHHHHHHHhh
Confidence 99 99999999999999999999999 777778889999999999999999974 457999999999999999966
Q ss_pred hCCHHHHHHHHHHHHH
Q 003947 728 KYTWKIYSERLLNLSG 743 (784)
Q Consensus 728 ~ytw~~~a~~ll~ly~ 743 (784)
|||+.+++++.++|+
T Consensus 352 -~s~~~~~~~~~~~~~ 366 (366)
T cd03822 352 -MSWERVAERYLRLLA 366 (366)
T ss_pred -CCHHHHHHHHHHHhC
Confidence 999999999999873
No 43
>cd03807 GT1_WbnK_like This family is most closely related to the GT1 family of glycosyltransferases. WbnK in Shigella dysenteriae has been shown to be involved in the type 7 O-antigen biosynthesis.
Probab=100.00 E-value=2.7e-33 Score=302.01 Aligned_cols=363 Identities=17% Similarity=0.177 Sum_probs=263.4
Q ss_pred EEEEEccCccccccCccCCCCcccchhhhHHHHHHHHHHHHHHHHHcCCCcccceEEEecCCCCCCCCCcCcceeeecCc
Q 003947 256 NVVIFTPHGYFAQDNVLGYPDTGGQVVYILDQVRALENEMLLRIKQQGLDITPRILIITRLLPDAVGTTCGQRVEKVYGT 335 (784)
Q Consensus 256 kI~ivs~h~~~~~~~~lg~p~tGG~~vyv~d~~raLe~eLa~~L~~~GheV~~~i~VvTr~~~~~~g~~~~~~~e~v~~~ 335 (784)
||+++.+-.. .||.+.++. .|++.|++.||+|. +++....... .... ..
T Consensus 1 ~i~~i~~~~~-----------~gG~~~~~~--------~l~~~l~~~~~~v~----~~~~~~~~~~----~~~~----~~ 49 (365)
T cd03807 1 KVLHVITGLD-----------VGGAERMLV--------RLLKGLDRDRFEHV----VISLTDRGEL----GEEL----EE 49 (365)
T ss_pred CeEEEEeecc-----------CccHHHHHH--------HHHHHhhhccceEE----EEecCcchhh----hHHH----Hh
Confidence 5777764432 389999999 66667789999998 7775422111 1111 11
Q ss_pred CCeEEEEccCCCCcccccccccccCChhhHHHHHHHHHHHHHHHcCCCceEEEEcCCChhHHHHHHHHh-CCCcEEEEec
Q 003947 336 KYSDILRVPFRTEEGIVRKWISRFEVWPYLETFTEDVATEIIQELQCKPDLIIGNYSDGNIVASLLAHK-LDVTQCTIAH 414 (784)
Q Consensus 336 ~~v~IlrvP~~~~~~~~~~~isr~~l~~yl~~f~~~~~~~i~~~~~~~pDIIh~~~~~~~lva~llar~-~gvp~V~t~H 414 (784)
.++.+..++.... ...+. +...+.+.+. +.+||+||++...+...+...++. .++|.+.+.|
T Consensus 50 ~~i~v~~~~~~~~----------~~~~~----~~~~~~~~~~---~~~~div~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 112 (365)
T cd03807 50 AGVPVYCLGKRPG----------RPDPG----ALLRLYKLIR---RLRPDVVHTWMYHADLYGGLAARLAGVPPVIWGIR 112 (365)
T ss_pred cCCeEEEEecccc----------cccHH----HHHHHHHHHH---hhCCCEEEeccccccHHHHHHHHhcCCCcEEEEec
Confidence 3466666554321 00111 1112233332 348999999987776666666666 6889999999
Q ss_pred CCcccCCCCCcchhhhccccccccchhhhhHHHhcccCEEEecChHhHhhccccccccccccccccccceeeecCCCCCC
Q 003947 415 ALELTKYPDSDINWKKLDDKYHFSCQFTADLFAMNRTDFIITSTFQEIAGSKDTVGQYESHTAFSLPGLYRVVNGIDAFD 494 (784)
Q Consensus 415 ~l~~~k~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~~~~~~~~~~vgqYe~~~~f~~p~l~~~~~gi~~f~ 494 (784)
+...... .+. ...+ ...+....+.+|.++++|....+...+ .|++ .
T Consensus 113 ~~~~~~~-----~~~--~~~~-----~~~~~~~~~~~~~~i~~s~~~~~~~~~--------------------~~~~--~ 158 (365)
T cd03807 113 HSDLDLG-----KKS--TRLV-----ARLRRLLSSFIPLIVANSAAAAEYHQA--------------------IGYP--P 158 (365)
T ss_pred CCccccc-----chh--HhHH-----HHHHHHhccccCeEEeccHHHHHHHHH--------------------cCCC--h
Confidence 8654321 010 0111 112345677899999999877652111 1333 6
Q ss_pred CceEEecCCCCCCCCCCCcHHHHhhhcchhhhHHhhcCchhhhhhhccccCCCCCEEEEEecccCCCChHHHHHHHHHhH
Q 003947 495 PKFNIVSPGADMTIYFPYMEEKRRLKHFHSEIEELLYSPVENKEHLCVLKDSSKPILFTMARLDRVKNLTGLVEWYGKNA 574 (784)
Q Consensus 495 ~k~~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~~gll~~~~k~iIl~vGRL~~~Kgi~~LieA~~~l~ 574 (784)
.++.++|||+|...|.+....... .++++++ ++++++|+++||+.+.||++.+++++..+.
T Consensus 159 ~~~~vi~~~~~~~~~~~~~~~~~~-----------------~~~~~~~--~~~~~~i~~~G~~~~~K~~~~li~a~~~l~ 219 (365)
T cd03807 159 KKIVVIPNGVDTERFSPDLDARAR-----------------LREELGL--PEDTFLIGIVARLHPQKDHATLLRAAALLL 219 (365)
T ss_pred hheeEeCCCcCHHhcCCcccchHH-----------------HHHhcCC--CCCCeEEEEecccchhcCHHHHHHHHHHHH
Confidence 689999999999877665433221 1234555 567789999999999999999999999998
Q ss_pred ccCCCeEEEEEeCCCCCCcccHHHHHHHHHHHHHHH-hcCCCCcEEEccCcCCcCChhHHHHHHHccccEEEeCCCCCCC
Q 003947 575 KLRELVNLVVVGGDRRKESKDLEEQAEMKKMYGLID-TYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAF 653 (784)
Q Consensus 575 ~~~~~v~LvIVG~g~~~~s~d~ee~~~~~~l~~li~-~l~L~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~f 653 (784)
+..++++|+++|.+... ........ ++++.++|.|+|.. +++..+++. +|++++||..|+|
T Consensus 220 ~~~~~~~l~i~G~~~~~-----------~~~~~~~~~~~~~~~~v~~~g~~------~~~~~~~~~-adi~v~ps~~e~~ 281 (365)
T cd03807 220 KKFPNARLLLVGDGPDR-----------ANLELLALKELGLEDKVILLGER------SDVPALLNA-LDVFVLSSLSEGF 281 (365)
T ss_pred HhCCCeEEEEecCCcch-----------hHHHHHHHHhcCCCceEEEcccc------ccHHHHHHh-CCEEEeCCccccC
Confidence 87889999999988641 22333444 78889999999932 367888885 9999999999999
Q ss_pred cHHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHH
Q 003947 654 GLTVVEAMTCGLPTFATCNGGPAEIIVHGKSGFHIDPYKGDQATGILVDFFEKCKVDPGHWDEISQGGLKRIQEKYTWKI 733 (784)
Q Consensus 654 GltvlEAMA~GlPVIaT~~GG~~EiI~dg~~G~li~p~d~e~lAe~I~~~l~~ll~dp~~~~~m~~~a~~~v~~~ytw~~ 733 (784)
|++++|||+||+|||+|+.||..|++.+ +|++++++|+++++++|.++ ++|++.+.++++++++++.++|+|+.
T Consensus 282 ~~~~~Ea~a~g~PvI~~~~~~~~e~~~~--~g~~~~~~~~~~l~~~i~~l----~~~~~~~~~~~~~~~~~~~~~~s~~~ 355 (365)
T cd03807 282 PNVLLEAMACGLPVVATDVGDNAELVGD--TGFLVPPGDPEALAEAIEAL----LADPALRQALGEAARERIEENFSIEA 355 (365)
T ss_pred CcHHHHHHhcCCCEEEcCCCChHHHhhc--CCEEeCCCCHHHHHHHHHHH----HhChHHHHHHHHHHHHHHHHhCCHHH
Confidence 9999999999999999999999999977 89999999999999999854 57999999999999999999999999
Q ss_pred HHHHHHHHHH
Q 003947 734 YSERLLNLSG 743 (784)
Q Consensus 734 ~a~~ll~ly~ 743 (784)
+++++.++|+
T Consensus 356 ~~~~~~~~y~ 365 (365)
T cd03807 356 MVEAYEELYR 365 (365)
T ss_pred HHHHHHHHhC
Confidence 9999999874
No 44
>cd03817 GT1_UGDG_like This family is most closely related to the GT1 family of glycosyltransferases. UDP-glucose-diacylglycerol glucosyltransferase (UGDG; also known as 1,2-diacylglycerol 3-glucosyltransferase) catalyzes the transfer of glucose from UDP-glucose to 1,2-diacylglycerol forming 3-D-glucosyl-1,2-diacylglycerol.
Probab=100.00 E-value=1.9e-33 Score=304.68 Aligned_cols=371 Identities=19% Similarity=0.275 Sum_probs=262.6
Q ss_pred EEEEEccCccccccCccCCCCcccchhhhHHHHHHHHHHHHHHHHHcCCCcccceEEEecCCCCCCCCCcCcceeeecCc
Q 003947 256 NVVIFTPHGYFAQDNVLGYPDTGGQVVYILDQVRALENEMLLRIKQQGLDITPRILIITRLLPDAVGTTCGQRVEKVYGT 335 (784)
Q Consensus 256 kI~ivs~h~~~~~~~~lg~p~tGG~~vyv~d~~raLe~eLa~~L~~~GheV~~~i~VvTr~~~~~~g~~~~~~~e~v~~~ 335 (784)
||++++...+ |..||...++. .|+++|+++||+|+ ++|...+..... . ..
T Consensus 1 kil~~~~~~~---------p~~~G~~~~~~--------~l~~~L~~~g~~v~----v~~~~~~~~~~~------~---~~ 50 (374)
T cd03817 1 KIGIFTDTYL---------PQVNGVATSIR--------RLAEELEKRGHEVY----VVAPSYPGAPEE------E---EV 50 (374)
T ss_pred CeeEeehhcc---------CCCCCeehHHH--------HHHHHHHHcCCeEE----EEeCCCCCCCcc------c---cc
Confidence 6888887654 57799999988 66777799999999 888664332110 0 00
Q ss_pred CCeEEEEccCCCCcccccccccccCChhhHHHHHHHHHHHHHHHcCCCceEEEEcCCCh-hHHHHHHHHhCCCcEEEEec
Q 003947 336 KYSDILRVPFRTEEGIVRKWISRFEVWPYLETFTEDVATEIIQELQCKPDLIIGNYSDG-NIVASLLAHKLDVTQCTIAH 414 (784)
Q Consensus 336 ~~v~IlrvP~~~~~~~~~~~isr~~l~~yl~~f~~~~~~~i~~~~~~~pDIIh~~~~~~-~lva~llar~~gvp~V~t~H 414 (784)
.++...+.+..... .....+... ..+...+. ..+||+||++++.. +..+..++++.++|++.+.|
T Consensus 51 ~~~~~~~~~~~~~~-------~~~~~~~~~----~~~~~~~~---~~~~Div~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 116 (374)
T cd03817 51 VVVRPFRVPTFKYP-------DFRLPLPIP----RALIIILK---ELGPDIVHTHTPFSLGLLGLRVARKLGIPVVATYH 116 (374)
T ss_pred ccccccccccchhh-------hhhccccHH----HHHHHHHh---hcCCCEEEECCchhhhhHHHHHHHHcCCCEEEEec
Confidence 01111111111000 000111111 11111122 45899999988654 55677788889999999999
Q ss_pred CCcccCCCCCcchhhhccccccccchh-hhhHHHhcccCEEEecChHhHhhccccccccccccccccccceeeecCCCCC
Q 003947 415 ALELTKYPDSDINWKKLDDKYHFSCQF-TADLFAMNRTDFIITSTFQEIAGSKDTVGQYESHTAFSLPGLYRVVNGIDAF 493 (784)
Q Consensus 415 ~l~~~k~~~s~~~~~~~~~~y~~~~~~-~~e~~a~~~AD~IIt~S~~~~~~~~~~vgqYe~~~~f~~p~l~~~~~gi~~f 493 (784)
+..... ... ............. ..++..++.||.+++.|+...+...+ .+.
T Consensus 117 ~~~~~~-~~~----~~~~~~~~~~~~~~~~~~~~~~~~d~i~~~s~~~~~~~~~--------------------~~~--- 168 (374)
T cd03817 117 TMYEDY-THY----VPLGRLLARAVVRRKLSRRFYNRCDAVIAPSEKIADLLRE--------------------YGV--- 168 (374)
T ss_pred CCHHHH-HHH----HhcccchhHHHHHHHHHHHHhhhCCEEEeccHHHHHHHHh--------------------cCC---
Confidence 864311 000 0000000000001 23556789999999999876552111 122
Q ss_pred CCceEEecCCCCCCCCCCCcHHHHhhhcchhhhHHhhcCchhhhhhhccccCCCCCEEEEEecccCCCChHHHHHHHHHh
Q 003947 494 DPKFNIVSPGADMTIYFPYMEEKRRLKHFHSEIEELLYSPVENKEHLCVLKDSSKPILFTMARLDRVKNLTGLVEWYGKN 573 (784)
Q Consensus 494 ~~k~~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~~gll~~~~k~iIl~vGRL~~~Kgi~~LieA~~~l 573 (784)
..++.++|||+|...+.+......+ +.++. +.++++|+++|++.+.||++.+++++.++
T Consensus 169 ~~~~~vi~~~~~~~~~~~~~~~~~~-------------------~~~~~--~~~~~~i~~~G~~~~~k~~~~l~~~~~~~ 227 (374)
T cd03817 169 KRPIEVIPTGIDLDRFEPVDGDDER-------------------RKLGI--PEDEPVLLYVGRLAKEKNIDFLIRAFARL 227 (374)
T ss_pred CCceEEcCCccchhccCccchhHHH-------------------HhcCC--CCCCeEEEEEeeeecccCHHHHHHHHHHH
Confidence 3468999999999887765432211 22333 45678999999999999999999999999
Q ss_pred HccCCCeEEEEEeCCCCCCcccHHHHHHHHHHHHHHHhcCCCCcEEEccCcCCcCChhHHHHHHHccccEEEeCCCCCCC
Q 003947 574 AKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYGLIDTYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAF 653 (784)
Q Consensus 574 ~~~~~~v~LvIVG~g~~~~s~d~ee~~~~~~l~~li~~l~L~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~f 653 (784)
.+..++++|+++|+++. .+.++++++++++.++|.++| .++.+++..+++. +|++++||..|++
T Consensus 228 ~~~~~~~~l~i~G~~~~-----------~~~~~~~~~~~~~~~~v~~~g----~~~~~~~~~~~~~-ad~~l~~s~~e~~ 291 (374)
T cd03817 228 LKEEPDVKLVIVGDGPE-----------REELEELARELGLADRVIFTG----FVPREELPDYYKA-ADLFVFASTTETQ 291 (374)
T ss_pred HHhCCCeEEEEEeCCch-----------HHHHHHHHHHcCCCCcEEEec----cCChHHHHHHHHH-cCEEEecccccCc
Confidence 88778999999998853 356778888899999999999 6778899999996 9999999999999
Q ss_pred cHHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHH
Q 003947 654 GLTVVEAMTCGLPTFATCNGGPAEIIVHGKSGFHIDPYKGDQATGILVDFFEKCKVDPGHWDEISQGGLKRIQEKYTWKI 733 (784)
Q Consensus 654 GltvlEAMA~GlPVIaT~~GG~~EiI~dg~~G~li~p~d~e~lAe~I~~~l~~ll~dp~~~~~m~~~a~~~v~~~ytw~~ 733 (784)
|++++|||+||+|||+++.|+..|++.++.+|+++++++. +++++|. +++++++.+++|++++++.+.+ ++
T Consensus 292 ~~~~~Ea~~~g~PvI~~~~~~~~~~i~~~~~g~~~~~~~~-~~~~~i~----~l~~~~~~~~~~~~~~~~~~~~-~~--- 362 (374)
T cd03817 292 GLVLLEAMAAGLPVVAVDAPGLPDLVADGENGFLFPPGDE-ALAEALL----RLLQDPELRRRLSKNAEESAEK-FS--- 362 (374)
T ss_pred ChHHHHHHHcCCcEEEeCCCChhhheecCceeEEeCCCCH-HHHHHHH----HHHhChHHHHHHHHHHHHHHHH-HH---
Confidence 9999999999999999999999999999999999998887 8888886 5568999999999999999954 44
Q ss_pred HHHHHHHHHHH
Q 003947 734 YSERLLNLSGV 744 (784)
Q Consensus 734 ~a~~ll~ly~~ 744 (784)
.++++.++|+.
T Consensus 363 ~~~~~~~~~~~ 373 (374)
T cd03817 363 FAKKVEKLYEE 373 (374)
T ss_pred HHHHHHHHHhc
Confidence 66677776653
No 45
>cd03812 GT1_CapH_like This family is most closely related to the GT1 family of glycosyltransferases. capH in Staphylococcus aureus has been shown to be required for the biosynthesis of the type 1 capsular polysaccharide (CP1).
Probab=100.00 E-value=1.9e-33 Score=307.37 Aligned_cols=347 Identities=14% Similarity=0.154 Sum_probs=246.8
Q ss_pred EEEEEccCccccccCccCCCCcccchhhhHHHHHHHHHHHHHHHHHcCCCcccceEEEecCCCCCCCCCcCcceeeecCc
Q 003947 256 NVVIFTPHGYFAQDNVLGYPDTGGQVVYILDQVRALENEMLLRIKQQGLDITPRILIITRLLPDAVGTTCGQRVEKVYGT 335 (784)
Q Consensus 256 kI~ivs~h~~~~~~~~lg~p~tGG~~vyv~d~~raLe~eLa~~L~~~GheV~~~i~VvTr~~~~~~g~~~~~~~e~v~~~ 335 (784)
||+++++.. ..||.+.++. ++++.|++.||+|+ +++...... ........
T Consensus 1 kIl~~~~~~-----------~~GG~~~~~~--------~l~~~L~~~~~~v~----~i~~~~~~~-------~~~~~~~~ 50 (358)
T cd03812 1 KILHIVGTM-----------NRGGIETFIM--------NYYRNLDRSKIQFD----FLVTSKEEG-------DYDDEIEK 50 (358)
T ss_pred CEEEEeCCC-----------CCccHHHHHH--------HHHHhcCccceEEE----EEEeCCCCc-------chHHHHHH
Confidence 678886543 3599999999 55555688999999 887543221 00011112
Q ss_pred CCeEEEEccCCCCcccccccccccCChhhHHHHHHHHHHHHHHHcCCCceEEEEcCCChhHHHHHHHHhCCCcE-EEEec
Q 003947 336 KYSDILRVPFRTEEGIVRKWISRFEVWPYLETFTEDVATEIIQELQCKPDLIIGNYSDGNIVASLLAHKLDVTQ-CTIAH 414 (784)
Q Consensus 336 ~~v~IlrvP~~~~~~~~~~~isr~~l~~yl~~f~~~~~~~i~~~~~~~pDIIh~~~~~~~lva~llar~~gvp~-V~t~H 414 (784)
.++.+++++.... ..+. +...+.+.+. ..+||+||+|+.....++..+++..+.|. +.+.|
T Consensus 51 ~~~~~~~~~~~~~-----------~~~~----~~~~~~~~~~---~~~~Dvv~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 112 (358)
T cd03812 51 LGGKIYYIPARKK-----------NPLK----YFKKLYKLIK---KNKYDIVHVHGSSASGFILLAAKKAGVKVRIAHSH 112 (358)
T ss_pred cCCeEEEecCCCc-----------cHHH----HHHHHHHHHh---cCCCCEEEEeCcchhHHHHHHHhhCCCCeEEEEec
Confidence 2466666554321 1111 2222222222 45899999999887667777777777775 56677
Q ss_pred CCcccCCCCCcchhhhccccccccchhhhhHHHhcccCEEEecChHhHhhccccccccccccccccccceeeecCCCCCC
Q 003947 415 ALELTKYPDSDINWKKLDDKYHFSCQFTADLFAMNRTDFIITSTFQEIAGSKDTVGQYESHTAFSLPGLYRVVNGIDAFD 494 (784)
Q Consensus 415 ~l~~~k~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~~~~~~~~~~vgqYe~~~~f~~p~l~~~~~gi~~f~ 494 (784)
.......... . .... ...+....+.+|.++++|....+..... +. .
T Consensus 113 ~~~~~~~~~~----~----~~~~---~~~~~~~~~~~~~~i~~s~~~~~~~~~~---------------------~~--~ 158 (358)
T cd03812 113 NTSDSHDKKK----K----ILKY---KVLRKLINRLATDYLACSEEAGKWLFGK---------------------VK--N 158 (358)
T ss_pred cccccccccc----h----hhHH---HHHHHHHHhcCCEEEEcCHHHHHHHHhC---------------------CC--c
Confidence 6532221100 0 0000 1224456888999999998776521110 11 5
Q ss_pred CceEEecCCCCCCCCCCCcHHHHhhhcchhhhHHhhcCchhhhhhhccccCCCCCEEEEEecccCCCChHHHHHHHHHhH
Q 003947 495 PKFNIVSPGADMTIYFPYMEEKRRLKHFHSEIEELLYSPVENKEHLCVLKDSSKPILFTMARLDRVKNLTGLVEWYGKNA 574 (784)
Q Consensus 495 ~k~~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~~gll~~~~k~iIl~vGRL~~~Kgi~~LieA~~~l~ 574 (784)
.++.+||||+|.+.|.+....... ++..+. .+++++|+++||+.+.||++.+++++.++.
T Consensus 159 ~~~~vi~ngvd~~~~~~~~~~~~~------------------~~~~~~--~~~~~~i~~vGr~~~~Kg~~~li~a~~~l~ 218 (358)
T cd03812 159 KKFKVIPNGIDLEKFIFNEEIRKK------------------RRELGI--LEDKFVIGHVGRFSEQKNHEFLIEIFAELL 218 (358)
T ss_pred ccEEEEeccCcHHHcCCCchhhhH------------------HHHcCC--CCCCEEEEEEeccccccChHHHHHHHHHHH
Confidence 689999999999887665432211 112232 567889999999999999999999999999
Q ss_pred ccCCCeEEEEEeCCCCCCcccHHHHHHHHHHHHHHHhcCCCCcEEEccCcCCcCChhHHHHHHHccccEEEeCCCCCCCc
Q 003947 575 KLRELVNLVVVGGDRRKESKDLEEQAEMKKMYGLIDTYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFG 654 (784)
Q Consensus 575 ~~~~~v~LvIVG~g~~~~s~d~ee~~~~~~l~~li~~l~L~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fG 654 (784)
+..++++++|+|+|+. .+.+++.++++++.++|.|+|. .+++..+++. +|++|+||..|+||
T Consensus 219 ~~~~~~~l~ivG~g~~-----------~~~~~~~~~~~~~~~~v~~~g~------~~~~~~~~~~-adi~v~ps~~E~~~ 280 (358)
T cd03812 219 KKNPNAKLLLVGDGEL-----------EEEIKKKVKELGLEDKVIFLGV------RNDVPELLQA-MDVFLFPSLYEGLP 280 (358)
T ss_pred HhCCCeEEEEEeCCch-----------HHHHHHHHHhcCCCCcEEEecc------cCCHHHHHHh-cCEEEecccccCCC
Confidence 8889999999999854 3567788889999999999994 3468888885 99999999999999
Q ss_pred HHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHH
Q 003947 655 LTVVEAMTCGLPTFATCNGGPAEIIVHGKSGFHIDPYKGDQATGILVDFFEKCKVDPGHWDEISQGGLKRIQE 727 (784)
Q Consensus 655 ltvlEAMA~GlPVIaT~~GG~~EiI~dg~~G~li~p~d~e~lAe~I~~~l~~ll~dp~~~~~m~~~a~~~v~~ 727 (784)
++++||||||+|||+|+.||..|++.++ .|++..+++++++|++|.+ +++||+.++.++..+......
T Consensus 281 ~~~lEAma~G~PvI~s~~~~~~~~i~~~-~~~~~~~~~~~~~a~~i~~----l~~~~~~~~~~~~~~~~~~~~ 348 (358)
T cd03812 281 LVLIEAQASGLPCILSDTITKEVDLTDL-VKFLSLDESPEIWAEEILK----LKSEDRRERSSESIKKKGLDA 348 (358)
T ss_pred HHHHHHHHhCCCEEEEcCCchhhhhccC-ccEEeCCCCHHHHHHHHHH----HHhCcchhhhhhhhhhccchh
Confidence 9999999999999999999999999984 6777777788999999984 558999999888887776533
No 46
>cd03825 GT1_wcfI_like This family is most closely related to the GT1 family of glycosyltransferases. wcfI in Bacteroides fragilis has been shown to be involved in the capsular polysaccharide biosynthesis.
Probab=100.00 E-value=3.9e-33 Score=304.87 Aligned_cols=343 Identities=18% Similarity=0.229 Sum_probs=245.0
Q ss_pred eEEEEEccCccccccCccCCCCcccchhhhHHHHHHHHHHHHHHHHHcCCCcccceEEEecCCCCCCCCCcCcceeeecC
Q 003947 255 FNVVIFTPHGYFAQDNVLGYPDTGGQVVYILDQVRALENEMLLRIKQQGLDITPRILIITRLLPDAVGTTCGQRVEKVYG 334 (784)
Q Consensus 255 mkI~ivs~h~~~~~~~~lg~p~tGG~~vyv~d~~raLe~eLa~~L~~~GheV~~~i~VvTr~~~~~~g~~~~~~~e~v~~ 334 (784)
|||++++... ..||.+.++. .+++.|.++||+|+ +++....
T Consensus 1 MkIl~~~~~~-----------~~gG~~~~~~--------~l~~~l~~~G~~v~----v~~~~~~---------------- 41 (365)
T cd03825 1 MKVLHLNTSD-----------ISGGAARAAY--------RLHRALQAAGVDST----MLVQEKK---------------- 41 (365)
T ss_pred CeEEEEecCC-----------CCCcHHHHHH--------HHHHHHHhcCCcee----EEEeecc----------------
Confidence 7999997542 2489999988 56666799999999 7764310
Q ss_pred cCCeEEEEccCCCCcccccccccccCChhhHHHHHHHHHHHHHHHcCCCceEEEEcCCChhHHHHHHHHhC--CCcEEEE
Q 003947 335 TKYSDILRVPFRTEEGIVRKWISRFEVWPYLETFTEDVATEIIQELQCKPDLIIGNYSDGNIVASLLAHKL--DVTQCTI 412 (784)
Q Consensus 335 ~~~v~IlrvP~~~~~~~~~~~isr~~l~~yl~~f~~~~~~~i~~~~~~~pDIIh~~~~~~~lva~llar~~--gvp~V~t 412 (784)
. +.+.+. ..+|||||.|+.....+......+. ++|.|++
T Consensus 42 ---------~---------------------------~~~~~~---~~~~diih~~~~~~~~~~~~~~~~~~~~~~~v~~ 82 (365)
T cd03825 42 ---------A---------------------------LISKIE---IINADIVHLHWIHGGFLSIEDLSKLLDRKPVVWT 82 (365)
T ss_pred ---------h---------------------------hhhChh---cccCCEEEEEccccCccCHHHHHHHHcCCCEEEE
Confidence 0 000111 3489999999866644444444444 9999999
Q ss_pred ecCCcccCCC----CCcchhh-h-----cccccc---ccchhhh--hHHHhcccCEEEecChHhHhhccccccccccccc
Q 003947 413 AHALELTKYP----DSDINWK-K-----LDDKYH---FSCQFTA--DLFAMNRTDFIITSTFQEIAGSKDTVGQYESHTA 477 (784)
Q Consensus 413 ~H~l~~~k~~----~s~~~~~-~-----~~~~y~---~~~~~~~--e~~a~~~AD~IIt~S~~~~~~~~~~vgqYe~~~~ 477 (784)
+|+....... .....+. . ....+. ...+... .......++.++++|....+-+.+.
T Consensus 83 ~hd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~s~~~~~~~~~~--------- 153 (365)
T cd03825 83 LHDMWPFTGGCHYPGGCDRYKTECGNCPQLGSYPEKDLSRWIWRRKRKAWADLNLTIVAPSRWLADCARSS--------- 153 (365)
T ss_pred cccCcccccccCCccccccccccCCCCCCCCCCCcccHHHHHHHHHHHHhccCCcEEEehhHHHHHHHHhc---------
Confidence 9987533210 0000000 0 000000 0111110 1111245777888886655421111
Q ss_pred cccccceeeecCCCCCCCceEEecCCCCCCCCCCCcHHHHhhhcchhhhHHhhcCchhhhhhhccccCCCCCEEEEEecc
Q 003947 478 FSLPGLYRVVNGIDAFDPKFNIVSPGADMTIYFPYMEEKRRLKHFHSEIEELLYSPVENKEHLCVLKDSSKPILFTMARL 557 (784)
Q Consensus 478 f~~p~l~~~~~gi~~f~~k~~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~~gll~~~~k~iIl~vGRL 557 (784)
..++ ..++.++|||+|.+.|.|...... ++.+++ +++++++++.|+.
T Consensus 154 ----------~~~~--~~~~~vi~ngi~~~~~~~~~~~~~-------------------~~~~~~--~~~~~~i~~~~~~ 200 (365)
T cd03825 154 ----------SLFK--GIPIEVIPNGIDTTIFRPRDKREA-------------------RKRLGL--PADKKIILFGAVG 200 (365)
T ss_pred ----------cccC--CCceEEeCCCCcccccCCCcHHHH-------------------HHHhCC--CCCCeEEEEEecC
Confidence 0122 569999999999998876543321 123444 5566777777777
Q ss_pred cC--CCChHHHHHHHHHhHcc-CCCeEEEEEeCCCCCCcccHHHHHHHHHHHHHHHhcCCCCcEEEccCcCCcCC-hhHH
Q 003947 558 DR--VKNLTGLVEWYGKNAKL-RELVNLVVVGGDRRKESKDLEEQAEMKKMYGLIDTYKLNGQFRWISSQMNRVR-NGEL 633 (784)
Q Consensus 558 ~~--~Kgi~~LieA~~~l~~~-~~~v~LvIVG~g~~~~s~d~ee~~~~~~l~~li~~l~L~~~V~flG~~~~~v~-~~el 633 (784)
.. .||++.++++++.+.+. .+++.++++|++... . ..++..+|.|+| .++ .+++
T Consensus 201 ~~~~~K~~~~ll~a~~~l~~~~~~~~~~~i~G~~~~~-----------~-------~~~~~~~v~~~g----~~~~~~~~ 258 (365)
T cd03825 201 GTDPRKGFDELIEALKRLAERWKDDIELVVFGASDPE-----------I-------PPDLPFPVHYLG----SLNDDESL 258 (365)
T ss_pred CCccccCHHHHHHHHHHhhhccCCCeEEEEeCCCchh-----------h-------hccCCCceEecC----CcCCHHHH
Confidence 65 89999999999998765 588999999998541 0 014567899999 555 6788
Q ss_pred HHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHHHHHHHHHHHHHHhcCCHHH
Q 003947 634 YRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCNGGPAEIIVHGKSGFHIDPYKGDQATGILVDFFEKCKVDPGH 713 (784)
Q Consensus 634 ~~~la~aadvfV~PS~~E~fGltvlEAMA~GlPVIaT~~GG~~EiI~dg~~G~li~p~d~e~lAe~I~~~l~~ll~dp~~ 713 (784)
..+++. +|++++||..|+||++++|||+||+|||+++.||..|++.++.+|+++++.|+++++++|.++ ++|++.
T Consensus 259 ~~~~~~-ad~~l~ps~~e~~g~~~~Eam~~g~PvI~~~~~~~~e~~~~~~~g~~~~~~~~~~~~~~l~~l----~~~~~~ 333 (365)
T cd03825 259 ALIYSA-ADVFVVPSLQENFPNTAIEALACGTPVVAFDVGGIPDIVDHGVTGYLAKPGDPEDLAEGIEWL----LADPDE 333 (365)
T ss_pred HHHHHh-CCEEEeccccccccHHHHHHHhcCCCEEEecCCCChhheeCCCceEEeCCCCHHHHHHHHHHH----HhCHHH
Confidence 899995 999999999999999999999999999999999999999999999999999999999999854 479999
Q ss_pred HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Q 003947 714 WDEISQGGLKRIQEKYTWKIYSERLLNLSGV 744 (784)
Q Consensus 714 ~~~m~~~a~~~v~~~ytw~~~a~~ll~ly~~ 744 (784)
+.+|++++++++.++|||+.++++++++|+.
T Consensus 334 ~~~~~~~~~~~~~~~~s~~~~~~~~~~~y~~ 364 (365)
T cd03825 334 REELGEAARELAENEFDSRVQAKRYLSLYEE 364 (365)
T ss_pred HHHHHHHHHHHHHHhcCHHHHHHHHHHHHhh
Confidence 9999999999999999999999999999864
No 47
>cd03816 GT1_ALG1_like This family is most closely related to the GT1 family of glycosyltransferases. The yeast gene ALG1 has been shown to function as a mannosyltransferase that catalyzes the formation of dolichol pyrophosphate (Dol-PP)-GlcNAc2Man from GDP-Man and Dol-PP-Glc-NAc2, and participates in the formation of the lipid-linked precursor oligosaccharide for N-glycosylation. In humans ALG1 has been associated with the congenital disorders of glycosylation (CDG) designated as subtype CDG-Ik.
Probab=100.00 E-value=9e-33 Score=312.20 Aligned_cols=388 Identities=11% Similarity=0.071 Sum_probs=255.1
Q ss_pred cceEEEEEccCccccccCccCCCCcccchhhhHHHHHHHHHHHHHHHHHcCCCcccceEEEecCCCCCCCCCcCcceeee
Q 003947 253 RVFNVVIFTPHGYFAQDNVLGYPDTGGQVVYILDQVRALENEMLLRIKQQGLDITPRILIITRLLPDAVGTTCGQRVEKV 332 (784)
Q Consensus 253 ~~mkI~ivs~h~~~~~~~~lg~p~tGG~~vyv~d~~raLe~eLa~~L~~~GheV~~~i~VvTr~~~~~~g~~~~~~~e~v 332 (784)
...||++++.- . +|.+..+. +++++|+++||+|+ |+|...+.. .+..
T Consensus 2 ~~~~~~~~~~~-~------------~~~~~R~~--------~~a~~L~~~G~~V~----ii~~~~~~~--------~~~~ 48 (415)
T cd03816 2 KRKRVCVLVLG-D------------IGRSPRMQ--------YHALSLAKHGWKVD----LVGYLETPP--------HDEI 48 (415)
T ss_pred CccEEEEEEec-c------------cCCCHHHH--------HHHHHHHhcCceEE----EEEecCCCC--------CHHH
Confidence 34578887642 1 34455556 56777899999999 888653211 1111
Q ss_pred cCcCCeEEEEccCCC-CcccccccccccCChhhHHHHHH---HHHHHHHHHcCCCceEEEEcCCCh---hHHHHHHHHhC
Q 003947 333 YGTKYSDILRVPFRT-EEGIVRKWISRFEVWPYLETFTE---DVATEIIQELQCKPDLIIGNYSDG---NIVASLLAHKL 405 (784)
Q Consensus 333 ~~~~~v~IlrvP~~~-~~~~~~~~isr~~l~~yl~~f~~---~~~~~i~~~~~~~pDIIh~~~~~~---~lva~llar~~ 405 (784)
....++.+++++... ..+.. ..+..+...... .+...+.. ..+||+||+|.+.+ ...+.++++..
T Consensus 49 ~~~~~v~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~l~~--~~~~Dvi~~~~~~~~~~~~~a~~~~~~~ 120 (415)
T cd03816 49 LSNPNITIHPLPPPPQRLNKL------PFLLFAPLKVLWQFFSLLWLLYK--LRPADYILIQNPPSIPTLLIAWLYCLLR 120 (415)
T ss_pred hcCCCEEEEECCCCccccccc------hHHHHHHHHHHHHHHHHHHHHHh--cCCCCEEEEeCCCCchHHHHHHHHHHHh
Confidence 223468888887653 11100 011112111111 11111222 45899999987554 44566778888
Q ss_pred CCcEEEEecCCcccCCCCCcchhhhccccccccchhhhhHHHhcccCEEEecChHhHhhcccccccccccccccccccee
Q 003947 406 DVTQCTIAHALELTKYPDSDINWKKLDDKYHFSCQFTADLFAMNRTDFIITSTFQEIAGSKDTVGQYESHTAFSLPGLYR 485 (784)
Q Consensus 406 gvp~V~t~H~l~~~k~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~~~~~~~~~~vgqYe~~~~f~~p~l~~ 485 (784)
++|+|++.|+.+..... . .........++.. ..|+..++.||.||++|+...+.+.+
T Consensus 121 ~~~~V~~~h~~~~~~~~-~--~~~~~~~~~~~~~--~~e~~~~~~ad~ii~vS~~~~~~l~~------------------ 177 (415)
T cd03816 121 RTKLIIDWHNYGYTILA-L--KLGENHPLVRLAK--WYEKLFGRLADYNLCVTKAMKEDLQQ------------------ 177 (415)
T ss_pred CCeEEEEcCCchHHHHh-c--ccCCCCHHHHHHH--HHHHHHhhcCCEeeecCHHHHHHHHh------------------
Confidence 99999999986421100 0 0000001111111 23667889999999999987763221
Q ss_pred eecCCCCCCCceEEecCCCCCCCCCCCcHHHHhhhcchhhhHHh--hcCch-hhhhhhccccCCCCCEEEEEecccCCCC
Q 003947 486 VVNGIDAFDPKFNIVSPGADMTIYFPYMEEKRRLKHFHSEIEEL--LYSPV-ENKEHLCVLKDSSKPILFTMARLDRVKN 562 (784)
Q Consensus 486 ~~~gi~~f~~k~~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~--l~~~~-~~~~~~gll~~~~k~iIl~vGRL~~~Kg 562 (784)
.|++ ..|+.|||||. ...|.|......+... ... -+.+. ......+. .+++..+++++||+.+.||
T Consensus 178 --~~~~--~~ki~vI~Ng~-~~~f~p~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~-~~~~~~vi~~~grl~~~K~ 246 (415)
T cd03816 178 --FNNW--KIRATVLYDRP-PEQFRPLPLEEKHELF-----LKLAKTFLTRELRIGAVQL-SEERPALLVSSTSWTPDED 246 (415)
T ss_pred --hhcc--CCCeeecCCCC-HHHceeCcHHHHHHHH-----Hhcccccccccccccccee-cCCCceEEEEeccccCCCC
Confidence 2333 77999999994 4567765432211000 000 00000 00001122 1234567888999999999
Q ss_pred hHHHHHHHHHhHc------cCCCeEEEEEeCCCCCCcccHHHHHHHHHHHHHHHhcCCCCcEEEccCcCCcCChhHHHHH
Q 003947 563 LTGLVEWYGKNAK------LRELVNLVVVGGDRRKESKDLEEQAEMKKMYGLIDTYKLNGQFRWISSQMNRVRNGELYRY 636 (784)
Q Consensus 563 i~~LieA~~~l~~------~~~~v~LvIVG~g~~~~s~d~ee~~~~~~l~~li~~l~L~~~V~flG~~~~~v~~~el~~~ 636 (784)
++.|++|+..+++ .+|+++|+|+|+|+. .+.++++++++++.+.+.+.| +++.+++..+
T Consensus 247 ~~~li~A~~~l~~~~~~~~~~~~i~l~ivG~G~~-----------~~~l~~~~~~~~l~~~~~~~g----~~~~~~~~~~ 311 (415)
T cd03816 247 FGILLDALVAYEKSAATGPKLPKLLCIITGKGPL-----------KEKYLERIKELKLKKVTIRTP----WLSAEDYPKL 311 (415)
T ss_pred HHHHHHHHHHHHHhhcccccCCCEEEEEEecCcc-----------HHHHHHHHHHcCCCcEEEEcC----cCCHHHHHHH
Confidence 9999999999864 246899999999964 467888999999975445556 6778999999
Q ss_pred HHccccEEEeCC---CCCCCcHHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHHHHHHHHHHHHHHhcCC---
Q 003947 637 ICDTKGAFVQPA---LYEAFGLTVVEAMTCGLPTFATCNGGPAEIIVHGKSGFHIDPYKGDQATGILVDFFEKCKVD--- 710 (784)
Q Consensus 637 la~aadvfV~PS---~~E~fGltvlEAMA~GlPVIaT~~GG~~EiI~dg~~G~li~p~d~e~lAe~I~~~l~~ll~d--- 710 (784)
|+. +|++|.|+ ..|+||++++||||||+|||+|+.||..|+|+++.+|++++ |++++|++|.. +++|
T Consensus 312 l~~-aDv~v~~~~~~~~~~~p~~~~Eama~G~PVI~s~~~~~~eiv~~~~~G~lv~--d~~~la~~i~~----ll~~~~~ 384 (415)
T cd03816 312 LAS-ADLGVSLHTSSSGLDLPMKVVDMFGCGLPVCALDFKCIDELVKHGENGLVFG--DSEELAEQLID----LLSNFPN 384 (415)
T ss_pred HHh-CCEEEEccccccccCCcHHHHHHHHcCCCEEEeCCCCHHHHhcCCCCEEEEC--CHHHHHHHHHH----HHhcCCC
Confidence 995 99999753 35789999999999999999999999999999999999994 89999999985 4467
Q ss_pred HHHHHHHHHHHHHHHHHhCCHHHHHHHHH
Q 003947 711 PGHWDEISQGGLKRIQEKYTWKIYSERLL 739 (784)
Q Consensus 711 p~~~~~m~~~a~~~v~~~ytw~~~a~~ll 739 (784)
|+.+++|+++|++++ .++|+.-.++.+
T Consensus 385 ~~~~~~m~~~~~~~~--~~~~~~~~~~~~ 411 (415)
T cd03816 385 RGKLNSLKKGAQEES--ELRWDENWDRVV 411 (415)
T ss_pred HHHHHHHHHHHHHhh--hcCHHHHHHHHh
Confidence 999999999999996 788887766654
No 48
>PRK09922 UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D-galactosyltransferase; Provisional
Probab=100.00 E-value=2.5e-33 Score=310.24 Aligned_cols=269 Identities=16% Similarity=0.202 Sum_probs=202.9
Q ss_pred CCCceEEEEcCCChhHHHHHHHHhCCCcE--EEEecCCcccCCCCCcchhhhccccccccchhhhhHHHhcccCEEEecC
Q 003947 381 QCKPDLIIGNYSDGNIVASLLAHKLDVTQ--CTIAHALELTKYPDSDINWKKLDDKYHFSCQFTADLFAMNRTDFIITST 458 (784)
Q Consensus 381 ~~~pDIIh~~~~~~~lva~llar~~gvp~--V~t~H~l~~~k~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S 458 (784)
+.+||+||+|.....+.+.++++..+.|. +.+.|...... ..+ ....+..+|.++++|
T Consensus 82 ~~~~Dii~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~------------~~~--------~~~~~~~~d~~i~~S 141 (359)
T PRK09922 82 ETQPDIVICIDVISCLYANKARKKSGKQFKIFSWPHFSLDHK------------KHA--------ECKKITCADYHLAIS 141 (359)
T ss_pred hcCCCEEEEcCHHHHHHHHHHHHHhCCCCeEEEEecCccccc------------chh--------hhhhhhcCCEEEEcC
Confidence 45899999998766677777777767653 44455321100 000 011247899999999
Q ss_pred hHhHhhccccccccccccccccccceeeecCCCCCCCceEEecCCCCCCCCCCCcHHHHhhhcchhhhHHhhcCchhhhh
Q 003947 459 FQEIAGSKDTVGQYESHTAFSLPGLYRVVNGIDAFDPKFNIVSPGADMTIYFPYMEEKRRLKHFHSEIEELLYSPVENKE 538 (784)
Q Consensus 459 ~~~~~~~~~~vgqYe~~~~f~~p~l~~~~~gi~~f~~k~~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~ 538 (784)
....+.+. ..|++ ..++.+||||+|.+.+.....
T Consensus 142 ~~~~~~~~--------------------~~~~~--~~ki~vi~N~id~~~~~~~~~------------------------ 175 (359)
T PRK09922 142 SGIKEQMM--------------------ARGIS--AQRISVIYNPVEIKTIIIPPP------------------------ 175 (359)
T ss_pred HHHHHHHH--------------------HcCCC--HHHEEEEcCCCCHHHccCCCc------------------------
Confidence 87765211 12443 568999999999654432110
Q ss_pred hhccccCCCCCEEEEEeccc--CCCChHHHHHHHHHhHccCCCeEEEEEeCCCCCCcccHHHHHHHHHHHHHHHhcCCCC
Q 003947 539 HLCVLKDSSKPILFTMARLD--RVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYGLIDTYKLNG 616 (784)
Q Consensus 539 ~~gll~~~~k~iIl~vGRL~--~~Kgi~~LieA~~~l~~~~~~v~LvIVG~g~~~~s~d~ee~~~~~~l~~li~~l~L~~ 616 (784)
..+++++++++||+. +.||++.+++++.++. ++++|+|+|+|++ .+.++++++++++.+
T Consensus 176 -----~~~~~~~i~~~Grl~~~~~k~~~~l~~a~~~~~---~~~~l~ivG~g~~-----------~~~l~~~~~~~~l~~ 236 (359)
T PRK09922 176 -----ERDKPAVFLYVGRLKFEGQKNVKELFDGLSQTT---GEWQLHIIGDGSD-----------FEKCKAYSRELGIEQ 236 (359)
T ss_pred -----ccCCCcEEEEEEEEecccCcCHHHHHHHHHhhC---CCeEEEEEeCCcc-----------HHHHHHHHHHcCCCC
Confidence 023568899999996 4699999999998874 3799999999964 356788899999999
Q ss_pred cEEEccCcCCcCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcC-ccccccccccCceEEEECCCCHHH
Q 003947 617 QFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATC-NGGPAEIIVHGKSGFHIDPYKGDQ 695 (784)
Q Consensus 617 ~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMA~GlPVIaT~-~GG~~EiI~dg~~G~li~p~d~e~ 695 (784)
+|.|+|++.+ +.+++..+++. +|++|+||..|+||++++||||||+|||+|+ .||+.|+|.++.+|++++|+|+++
T Consensus 237 ~v~f~G~~~~--~~~~~~~~~~~-~d~~v~~s~~Egf~~~~lEAma~G~Pvv~s~~~~g~~eiv~~~~~G~lv~~~d~~~ 313 (359)
T PRK09922 237 RIIWHGWQSQ--PWEVVQQKIKN-VSALLLTSKFEGFPMTLLEAMSYGIPCISSDCMSGPRDIIKPGLNGELYTPGNIDE 313 (359)
T ss_pred eEEEecccCC--cHHHHHHHHhc-CcEEEECCcccCcChHHHHHHHcCCCEEEeCCCCChHHHccCCCceEEECCCCHHH
Confidence 9999996543 34678888885 9999999999999999999999999999999 999999999999999999999999
Q ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Q 003947 696 ATGILVDFFEKCKVDPGHWDEISQGGLKRIQEKYTWKIYSERLLNLSGV 744 (784)
Q Consensus 696 lAe~I~~~l~~ll~dp~~~~~m~~~a~~~v~~~ytw~~~a~~ll~ly~~ 744 (784)
+|++|.++ ++|++.+ +.++......+|+-+.+.+++..+|..
T Consensus 314 la~~i~~l----~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~ 355 (359)
T PRK09922 314 FVGKLNKV----ISGEVKY---QHDAIPNSIERFYEVLYFKNLNNALFS 355 (359)
T ss_pred HHHHHHHH----HhCcccC---CHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 99999854 4788744 223333344778888888888888763
No 49
>PLN02949 transferase, transferring glycosyl groups
Probab=100.00 E-value=1.7e-32 Score=312.73 Aligned_cols=400 Identities=17% Similarity=0.218 Sum_probs=259.6
Q ss_pred cCCCcceEEEEEccCccccccCccCCCCcccchhhhHHHHHHHHHHHHHHHHHcCCCcccceEEEecCCCCCCCCCcCcc
Q 003947 249 GKIPRVFNVVIFTPHGYFAQDNVLGYPDTGGQVVYILDQVRALENEMLLRIKQQGLDITPRILIITRLLPDAVGTTCGQR 328 (784)
Q Consensus 249 ~~~p~~mkI~ivs~h~~~~~~~~lg~p~tGG~~vyv~d~~raLe~eLa~~L~~~GheV~~~i~VvTr~~~~~~g~~~~~~ 328 (784)
++....++|+++.|+.. ..||.+..+++.|++| .++|++++ |+|+|...+. .. .+.
T Consensus 28 ~~~~~~~~v~f~HP~~~----------~ggG~ERvl~~a~~~l--------~~~~~~~~--v~iyt~~~d~-~~---~~~ 83 (463)
T PLN02949 28 ARRSRKRAVGFFHPYTN----------DGGGGERVLWCAVRAI--------QEENPDLD--CVIYTGDHDA-SP---DSL 83 (463)
T ss_pred cccCCCcEEEEECCCCC----------CCCChhhHHHHHHHHH--------HhhCCCCe--EEEEcCCCCC-CH---HHH
Confidence 45555679999977664 3379999999777776 67788654 4477755321 11 111
Q ss_pred eeeecCcCCeEEEEccCCCCccc-ccccccccCChhhHHHHHHHHHH---HHHHHcCCCceEEEEcCCChhHHHHHHHHh
Q 003947 329 VEKVYGTKYSDILRVPFRTEEGI-VRKWISRFEVWPYLETFTEDVAT---EIIQELQCKPDLIIGNYSDGNIVASLLAHK 404 (784)
Q Consensus 329 ~e~v~~~~~v~IlrvP~~~~~~~-~~~~isr~~l~~yl~~f~~~~~~---~i~~~~~~~pDIIh~~~~~~~lva~llar~ 404 (784)
+.....+-++++.+.+ ..-.+ .++|+. ...|+++.-+.+.+.. .+.......||+++-....+ ....+++.
T Consensus 84 l~~~~~~~~i~~~~~~--~~v~l~~~~~~~-~~~~~~~t~~~~~~~~~~l~~~~~~~~~p~v~vDt~~~~--~~~pl~~~ 158 (463)
T PLN02949 84 AARARDRFGVELLSPP--KVVHLRKRKWIE-EETYPRFTMIGQSLGSVYLAWEALCKFTPLYFFDTSGYA--FTYPLARL 158 (463)
T ss_pred HHHHHhhcceecCCCc--eEEEeccccccc-cccCCceehHHHHHHHHHHHHHHHHhcCCCEEEeCCCcc--cHHHHHHh
Confidence 1111222223221100 00000 134554 3345553222222211 11111123566554332211 12233445
Q ss_pred CCCcEEEEecCCcccC------------CCCCc--c--hhhhcc-ccccccchhhhhHHHhcccCEEEecChHhHhhccc
Q 003947 405 LDVTQCTIAHALELTK------------YPDSD--I--NWKKLD-DKYHFSCQFTADLFAMNRTDFIITSTFQEIAGSKD 467 (784)
Q Consensus 405 ~gvp~V~t~H~l~~~k------------~~~s~--~--~~~~~~-~~y~~~~~~~~e~~a~~~AD~IIt~S~~~~~~~~~ 467 (784)
.++|+++.+|-..... +.+.. . .+.... ..|+.... ..+....+.||.|+|+|....+.+++
T Consensus 159 ~~~~v~~yvH~p~~~~dm~~~v~~~~~~~~~~~~~a~~~~~~~~k~~Y~~~~~-~l~~~~~~~ad~ii~nS~~t~~~l~~ 237 (463)
T PLN02949 159 FGCKVVCYTHYPTISSDMISRVRDRSSMYNNDASIARSFWLSTCKILYYRAFA-WMYGLVGRCAHLAMVNSSWTKSHIEA 237 (463)
T ss_pred cCCcEEEEEeCCcchHHHHHHHhhcccccCccchhhccchhHHHHHHHHHHHH-HHHHHHcCCCCEEEECCHHHHHHHHH
Confidence 6899999999432110 00000 0 000000 01111100 13455679999999999887663322
Q ss_pred cccccccccccccccceeeecCCCCCCCceEEecCCCCCCCCCCCcHHHHhhhcchhhhHHhhcCchhhhhhhccccCCC
Q 003947 468 TVGQYESHTAFSLPGLYRVVNGIDAFDPKFNIVSPGADMTIYFPYMEEKRRLKHFHSEIEELLYSPVENKEHLCVLKDSS 547 (784)
Q Consensus 468 ~vgqYe~~~~f~~p~l~~~~~gi~~f~~k~~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~~gll~~~~ 547 (784)
.+ +. +.++.+++||+|...+.+.+.. .+++
T Consensus 238 ~~-------------------~~---~~~i~vvyp~vd~~~~~~~~~~----------------------------~~~~ 267 (463)
T PLN02949 238 LW-------------------RI---PERIKRVYPPCDTSGLQALPLE----------------------------RSED 267 (463)
T ss_pred Hc-------------------CC---CCCeEEEcCCCCHHHcccCCcc----------------------------ccCC
Confidence 21 11 3478899999997655321100 0235
Q ss_pred CCEEEEEecccCCCChHHHHHHHHHhHc----cCCCeEEEEEeCCCCCCcccHHHHHHHHHHHHHHHhcCCCCcEEEccC
Q 003947 548 KPILFTMARLDRVKNLTGLVEWYGKNAK----LRELVNLVVVGGDRRKESKDLEEQAEMKKMYGLIDTYKLNGQFRWISS 623 (784)
Q Consensus 548 k~iIl~vGRL~~~Kgi~~LieA~~~l~~----~~~~v~LvIVG~g~~~~s~d~ee~~~~~~l~~li~~l~L~~~V~flG~ 623 (784)
+++++++||+.+.||++.+++|++++.+ ..++++|+|+|++... +..++.++++++++++++.++|.|+|
T Consensus 268 ~~~il~vGR~~~~Kg~~llI~A~~~l~~~~~~~~~~~~LvIvG~~~~~-----~~~~~~~eL~~la~~l~L~~~V~f~g- 341 (463)
T PLN02949 268 PPYIISVAQFRPEKAHALQLEAFALALEKLDADVPRPKLQFVGSCRNK-----EDEERLQKLKDRAKELGLDGDVEFHK- 341 (463)
T ss_pred CCEEEEEEeeeccCCHHHHHHHHHHHHHhccccCCCcEEEEEeCCCCc-----ccHHHHHHHHHHHHHcCCCCcEEEeC-
Confidence 6789999999999999999999998764 2478999999998531 22244577889999999999999999
Q ss_pred cCCcCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcCccccc-ccccc---CceEEEECCCCHHHHHHH
Q 003947 624 QMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCNGGPA-EIIVH---GKSGFHIDPYKGDQATGI 699 (784)
Q Consensus 624 ~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMA~GlPVIaT~~GG~~-EiI~d---g~~G~li~p~d~e~lAe~ 699 (784)
.++.+++..+++. ++++|+||.+|+||++++||||||+|||+++.||+. |++.+ |.+|++++ |++++|++
T Consensus 342 ---~v~~~el~~ll~~-a~~~v~~s~~E~FGivvlEAMA~G~PVIa~~~gGp~~eIV~~~~~g~tG~l~~--~~~~la~a 415 (463)
T PLN02949 342 ---NVSYRDLVRLLGG-AVAGLHSMIDEHFGISVVEYMAAGAVPIAHNSAGPKMDIVLDEDGQQTGFLAT--TVEEYADA 415 (463)
T ss_pred ---CCCHHHHHHHHHh-CcEEEeCCccCCCChHHHHHHHcCCcEEEeCCCCCcceeeecCCCCcccccCC--CHHHHHHH
Confidence 6778899999996 899999999999999999999999999999999985 77765 67899874 89999999
Q ss_pred HHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Q 003947 700 LVDFFEKCKVDPGHWDEISQGGLKRIQEKYTWKIYSERLLNLSGV 744 (784)
Q Consensus 700 I~~~l~~ll~dp~~~~~m~~~a~~~v~~~ytw~~~a~~ll~ly~~ 744 (784)
|.++++ .+++.+++|+++|++++ ++|||+.+++++.+.+..
T Consensus 416 i~~ll~---~~~~~r~~m~~~ar~~~-~~FS~e~~~~~~~~~i~~ 456 (463)
T PLN02949 416 ILEVLR---MRETERLEIAAAARKRA-NRFSEQRFNEDFKDAIRP 456 (463)
T ss_pred HHHHHh---CCHHHHHHHHHHHHHHH-HHcCHHHHHHHHHHHHHH
Confidence 986542 36888999999999998 779999999999998764
No 50
>PRK10125 putative glycosyl transferase; Provisional
Probab=100.00 E-value=4e-33 Score=313.92 Aligned_cols=278 Identities=17% Similarity=0.114 Sum_probs=193.3
Q ss_pred CCCceEEEEcCCCh---hHHHH------HHHHhCCCcEEEEecCCcccC----CCCCcchhhhcc---cc---c-----c
Q 003947 381 QCKPDLIIGNYSDG---NIVAS------LLAHKLDVTQCTIAHALELTK----YPDSDINWKKLD---DK---Y-----H 436 (784)
Q Consensus 381 ~~~pDIIh~~~~~~---~lva~------llar~~gvp~V~t~H~l~~~k----~~~s~~~~~~~~---~~---y-----~ 436 (784)
..+|||||.|...+ ++... +..+..++|+|.|.|+.+... +...-..|+.-. +. | .
T Consensus 92 ~~~pDviHlH~~~~~~~~~~~l~~~~~~~~~~~~~~piV~TlHd~~~~tg~c~~~~~C~~~~~~c~~Cp~l~~~~~~~~d 171 (405)
T PRK10125 92 TPGPVVLHFHVLHSYWLNLKSVVRFCEKVKNHKPDVTLVWTLHDHWSVTGRCAFTDGCEGWKTGCQKCPTLNNYPPVKVD 171 (405)
T ss_pred ccCCCEEEEecccCceecHHHHHHHHhhhhcccCCCCEEEecccccccCCCcCCCcccccccccCCCCCCccCCCCCccc
Confidence 55899999998876 33211 112355799999999987542 111001111100 00 0 0
Q ss_pred ccchhh-hh----HHHhcccCEEEecChHhHhhccccccccccccccccccceeeecCCCCCCCceEEecCCCCCCCCCC
Q 003947 437 FSCQFT-AD----LFAMNRTDFIITSTFQEIAGSKDTVGQYESHTAFSLPGLYRVVNGIDAFDPKFNIVSPGADMTIYFP 511 (784)
Q Consensus 437 ~~~~~~-~e----~~a~~~AD~IIt~S~~~~~~~~~~vgqYe~~~~f~~p~l~~~~~gi~~f~~k~~VIpnGvD~~~f~p 511 (784)
.+.+.. .. ....+.++.+|+.|...++...+. .. ..++.|||||+|++.+.+
T Consensus 172 ~~~~~~~~k~~~~~~~~~~~~~iV~~S~~l~~~~~~~---------------------~~--~~~i~vI~NGid~~~~~~ 228 (405)
T PRK10125 172 RAHQLVAGKRQLFREMLALGCQFISPSQHVADAFNSL---------------------YG--PGRCRIINNGIDMATEAI 228 (405)
T ss_pred hHHHHHHHHHHHHHHHhhcCcEEEEcCHHHHHHHHHH---------------------cC--CCCEEEeCCCcCcccccc
Confidence 000000 00 112345789999998776522111 11 458999999999754333
Q ss_pred CcHHHHhhhcchhhhHHhhcCchhhhhhhccccCCCCCEEEEEecc--cCCCChHHHHHHHHHhHccCCCeEEEEEeCCC
Q 003947 512 YMEEKRRLKHFHSEIEELLYSPVENKEHLCVLKDSSKPILFTMARL--DRVKNLTGLVEWYGKNAKLRELVNLVVVGGDR 589 (784)
Q Consensus 512 ~~~~~~rl~~~~~~~~~~l~~~~~~~~~~gll~~~~k~iIl~vGRL--~~~Kgi~~LieA~~~l~~~~~~v~LvIVG~g~ 589 (784)
..+.... ..++++++|+++|+. .+.||++.+++|+.++. ++++|+|+|+++
T Consensus 229 ~~~~~~~------------------------~~~~~~~~il~v~~~~~~~~Kg~~~li~A~~~l~---~~~~L~ivG~g~ 281 (405)
T PRK10125 229 LAELPPV------------------------RETQGKPKIAVVAHDLRYDGKTDQQLVREMMALG---DKIELHTFGKFS 281 (405)
T ss_pred ccccccc------------------------ccCCCCCEEEEEEeccccCCccHHHHHHHHHhCC---CCeEEEEEcCCC
Confidence 2111100 003467889999994 47899999999998863 579999999874
Q ss_pred CCCcccHHHHHHHHHHHHHHHhcCCCCcEEEccCcCCcCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEE
Q 003947 590 RKESKDLEEQAEMKKMYGLIDTYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFA 669 (784)
Q Consensus 590 ~~~s~d~ee~~~~~~l~~li~~l~L~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMA~GlPVIa 669 (784)
.. ...+|.++|... +..++..+|+. +|+||+||..|+||++++||||||+|||+
T Consensus 282 ~~----------------------~~~~v~~~g~~~---~~~~l~~~y~~-aDvfV~pS~~Egfp~vilEAmA~G~PVVa 335 (405)
T PRK10125 282 PF----------------------TAGNVVNHGFET---DKRKLMSALNQ-MDALVFSSRVDNYPLILCEALSIGVPVIA 335 (405)
T ss_pred cc----------------------cccceEEecCcC---CHHHHHHHHHh-CCEEEECCccccCcCHHHHHHHcCCCEEE
Confidence 31 024688888543 35688888885 99999999999999999999999999999
Q ss_pred cCccccccccccCceEEEECCCCHHHHHHHHHHHHHHhcCCHHHHHH----HHHHHHHHHHHhCCHHHHHHHHHHHHHH
Q 003947 670 TCNGGPAEIIVHGKSGFHIDPYKGDQATGILVDFFEKCKVDPGHWDE----ISQGGLKRIQEKYTWKIYSERLLNLSGV 744 (784)
Q Consensus 670 T~~GG~~EiI~dg~~G~li~p~d~e~lAe~I~~~l~~ll~dp~~~~~----m~~~a~~~v~~~ytw~~~a~~ll~ly~~ 744 (784)
|+.||++|++.++ +|++++|+|++++|+.+ +++..++ +.+++++++.++|||+.++++|+++|+.
T Consensus 336 t~~gG~~Eiv~~~-~G~lv~~~d~~~La~~~---------~~~~~~~~~~~~~~~~r~~~~~~fs~~~~~~~y~~lY~~ 404 (405)
T PRK10125 336 THSDAAREVLQKS-GGKTVSEEEVLQLAQLS---------KPEIAQAVFGTTLAEFSQRSRAAYSGQQMLEEYVNFYQN 404 (405)
T ss_pred eCCCChHHhEeCC-cEEEECCCCHHHHHhcc---------CHHHHHHhhhhHHHHHHHHHHHhCCHHHHHHHHHHHHHh
Confidence 9999999999875 99999999999999754 4444443 3356899998999999999999999974
No 51
>PLN02846 digalactosyldiacylglycerol synthase
Probab=100.00 E-value=1.4e-32 Score=310.35 Aligned_cols=371 Identities=13% Similarity=0.112 Sum_probs=240.6
Q ss_pred cceEEEEEccCccccccCccCCCCcccchhhhHHHHHHHHHHHHHHHHHcC-CCcccceEEEecCCCCCCC-------CC
Q 003947 253 RVFNVVIFTPHGYFAQDNVLGYPDTGGQVVYILDQVRALENEMLLRIKQQG-LDITPRILIITRLLPDAVG-------TT 324 (784)
Q Consensus 253 ~~mkI~ivs~h~~~~~~~~lg~p~tGG~~vyv~d~~raLe~eLa~~L~~~G-heV~~~i~VvTr~~~~~~g-------~~ 324 (784)
+.|||+|++.-+. |..+|..+.++ .++..|+++| |+|+ |+++..+.... .+
T Consensus 3 ~~mrIaivTdt~l---------P~vnGva~s~~--------~~a~~L~~~G~heV~----vvaP~~~~~~~~~~~~~~~~ 61 (462)
T PLN02846 3 KKQHIAIFTTASL---------PWMTGTAVNPL--------FRAAYLAKDGDREVT----LVIPWLSLKDQKLVYPNKIT 61 (462)
T ss_pred CCCEEEEEEcCCC---------CCCCCeeccHH--------HHHHHHHhcCCcEEE----EEecCCcccccccccccccc
Confidence 4599999997766 67899999998 5666789999 7999 99887653211 01
Q ss_pred cCcceee---ecCcCCeEEEEccCCCCccccccccc--ccCChhhHHHHHHHHHHHHHHHcCCCceEEEEcCCCh-hHH-
Q 003947 325 CGQRVEK---VYGTKYSDILRVPFRTEEGIVRKWIS--RFEVWPYLETFTEDVATEIIQELQCKPDLIIGNYSDG-NIV- 397 (784)
Q Consensus 325 ~~~~~e~---v~~~~~v~IlrvP~~~~~~~~~~~is--r~~l~~yl~~f~~~~~~~i~~~~~~~pDIIh~~~~~~-~lv- 397 (784)
+....+. +....+-++.|+|..+...+-. +.+ +..+++ ..++.+.+. ..+|||||.+.+.. ++.
T Consensus 62 f~~~~~~e~~~~~~~~~~v~r~~s~~~p~yp~-r~~~~~r~~~~-----~~~i~~~l~---~~~pDVIHv~tP~~LG~~~ 132 (462)
T PLN02846 62 FSSPSEQEAYVRQWLEERISFLPKFSIKFYPG-KFSTDKRSILP-----VGDISETIP---DEEADIAVLEEPEHLTWYH 132 (462)
T ss_pred ccCchhhhhhhhhhccCeEEEecccccccCcc-cccccccccCC-----hHHHHHHHH---hcCCCEEEEcCchhhhhHH
Confidence 1111100 0011123455554332211000 000 011111 123333443 34899999998876 554
Q ss_pred -HHHHHHhCCCcEEEEecCCcccCCCCCcchhhhccccccccchhhhhHHHhcccCEEEecChHhHhhcccccccccccc
Q 003947 398 -ASLLAHKLDVTQCTIAHALELTKYPDSDINWKKLDDKYHFSCQFTADLFAMNRTDFIITSTFQEIAGSKDTVGQYESHT 476 (784)
Q Consensus 398 -a~llar~~gvp~V~t~H~l~~~k~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~~~~~~~~~~vgqYe~~~ 476 (784)
+..+++++++ +|.+.|+... .|.. ++.. .....+..........-.++|.+++.|....+ .
T Consensus 133 ~g~~~~~k~~~-vV~tyHT~y~-~Y~~---~~~~-g~~~~~l~~~~~~~~~r~~~d~vi~pS~~~~~-l----------- 194 (462)
T PLN02846 133 HGKRWKTKFRL-VIGIVHTNYL-EYVK---REKN-GRVKAFLLKYINSWVVDIYCHKVIRLSAATQD-Y----------- 194 (462)
T ss_pred HHHHHHhcCCc-EEEEECCChH-HHHH---Hhcc-chHHHHHHHHHHHHHHHHhcCEEEccCHHHHH-H-----------
Confidence 6667777765 8889998321 1110 0000 00000000000011112358999999974432 0
Q ss_pred ccccccceeeecCCCCCCCceEEecCCCCCCCCCCCcHHHHhhhcchhhhHHhhcCchhhhhhhccccCCC--CCEEEEE
Q 003947 477 AFSLPGLYRVVNGIDAFDPKFNIVSPGADMTIYFPYMEEKRRLKHFHSEIEELLYSPVENKEHLCVLKDSS--KPILFTM 554 (784)
Q Consensus 477 ~f~~p~l~~~~~gi~~f~~k~~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~~gll~~~~--k~iIl~v 554 (784)
.......++|||.+.|.|....... ..+ .++ .+.++|+
T Consensus 195 -----------------~~~~i~~v~GVd~~~f~~~~~~~~~--------------------~~~---~~~~~~~~~l~v 234 (462)
T PLN02846 195 -----------------PRSIICNVHGVNPKFLEIGKLKLEQ--------------------QKN---GEQAFTKGAYYI 234 (462)
T ss_pred -----------------hhCEEecCceechhhcCCCcccHhh--------------------hcC---CCCCcceEEEEE
Confidence 1123334589999988776432111 011 122 3578999
Q ss_pred ecccCCCChHHHHHHHHHhHccCCCeEEEEEeCCCCCCcccHHHHHHHHHHHHHHHhcCCCCcEEEccCcCCcCChhHHH
Q 003947 555 ARLDRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYGLIDTYKLNGQFRWISSQMNRVRNGELY 634 (784)
Q Consensus 555 GRL~~~Kgi~~LieA~~~l~~~~~~v~LvIVG~g~~~~s~d~ee~~~~~~l~~li~~l~L~~~V~flG~~~~~v~~~el~ 634 (784)
|||.+.||++.|++|++++.+..++++|+|+|+|++ .++++++++++++..++ |.|. .+.+
T Consensus 235 GRL~~eK~~~~Li~a~~~l~~~~~~~~l~ivGdGp~-----------~~~L~~~a~~l~l~~~v-f~G~----~~~~--- 295 (462)
T PLN02846 235 GKMVWSKGYKELLKLLHKHQKELSGLEVDLYGSGED-----------SDEVKAAAEKLELDVRV-YPGR----DHAD--- 295 (462)
T ss_pred ecCcccCCHHHHHHHHHHHHhhCCCeEEEEECCCcc-----------HHHHHHHHHhcCCcEEE-ECCC----CCHH---
Confidence 999999999999999999987778999999999976 36688899999987555 7773 3333
Q ss_pred HHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHHHHHHHHHHHHHHhcCCHHHH
Q 003947 635 RYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCNGGPAEIIVHGKSGFHIDPYKGDQATGILVDFFEKCKVDPGHW 714 (784)
Q Consensus 635 ~~la~aadvfV~PS~~E~fGltvlEAMA~GlPVIaT~~GG~~EiI~dg~~G~li~p~d~e~lAe~I~~~l~~ll~dp~~~ 714 (784)
.+++ ++|+||+||..|+||++++||||||+|||+++.++ .+++.++.+|+.+ .|.+++++++..++. .++
T Consensus 296 ~~~~-~~DvFv~pS~~Et~g~v~lEAmA~G~PVVa~~~~~-~~~v~~~~ng~~~--~~~~~~a~ai~~~l~---~~~--- 365 (462)
T PLN02846 296 PLFH-DYKVFLNPSTTDVVCTTTAEALAMGKIVVCANHPS-NEFFKQFPNCRTY--DDGKGFVRATLKALA---EEP--- 365 (462)
T ss_pred HHHH-hCCEEEECCCcccchHHHHHHHHcCCcEEEecCCC-cceeecCCceEec--CCHHHHHHHHHHHHc---cCc---
Confidence 3555 48999999999999999999999999999999998 5999999999998 488999999986552 233
Q ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Q 003947 715 DEISQGGLKRIQEKYTWKIYSERLLNLSGV 744 (784)
Q Consensus 715 ~~m~~~a~~~v~~~ytw~~~a~~ll~ly~~ 744 (784)
..++.+++ +.|||+..+++++++|+.
T Consensus 366 ~~~~~~a~----~~~SWe~~~~~l~~~~~~ 391 (462)
T PLN02846 366 APLTDAQR----HELSWEAATERFLRVADL 391 (462)
T ss_pred hhHHHHHH----HhCCHHHHHHHHHHHhcc
Confidence 22333322 599999999999999985
No 52
>cd03820 GT1_amsD_like This family is most closely related to the GT1 family of glycosyltransferases. AmSD in Erwinia amylovora has been shown to be involved in the biosynthesis of amylovoran, the acidic exopolysaccharide acting as a virulence factor. This enzyme may be responsible for the formation of galactose alpha-1,6 linkages in amylovoran.
Probab=100.00 E-value=2.8e-32 Score=291.61 Aligned_cols=345 Identities=17% Similarity=0.208 Sum_probs=248.7
Q ss_pred EEEEEccCccccccCccCCCCcccchhhhHHHHHHHHHHHHHHHHHcCCCcccceEEEecCCCCCCCCCcCcceeeecCc
Q 003947 256 NVVIFTPHGYFAQDNVLGYPDTGGQVVYILDQVRALENEMLLRIKQQGLDITPRILIITRLLPDAVGTTCGQRVEKVYGT 335 (784)
Q Consensus 256 kI~ivs~h~~~~~~~~lg~p~tGG~~vyv~d~~raLe~eLa~~L~~~GheV~~~i~VvTr~~~~~~g~~~~~~~e~v~~~ 335 (784)
||+++++... + .||...++. +|+++|+++||+|+ +++....... . ....
T Consensus 1 kI~i~~~~~~---------~-~gG~~~~~~--------~l~~~L~~~g~~v~----v~~~~~~~~~-------~--~~~~ 49 (348)
T cd03820 1 KILFVIPSLG---------N-AGGAERVLS--------NLANALAEKGHEVT----IISLDKGEPP-------F--YELD 49 (348)
T ss_pred CeEEEecccc---------C-CCChHHHHH--------HHHHHHHhCCCeEE----EEecCCCCCC-------c--cccC
Confidence 6888886654 2 589999988 66666788999999 8886543200 0 0111
Q ss_pred CCeEEEEccCCCCcccccccccccCChhhHHHHHHHHHHHHHHHcCCCceEEEEcCCChhHHHHHHHHhCC-CcEEEEec
Q 003947 336 KYSDILRVPFRTEEGIVRKWISRFEVWPYLETFTEDVATEIIQELQCKPDLIIGNYSDGNIVASLLAHKLD-VTQCTIAH 414 (784)
Q Consensus 336 ~~v~IlrvP~~~~~~~~~~~isr~~l~~yl~~f~~~~~~~i~~~~~~~pDIIh~~~~~~~lva~llar~~g-vp~V~t~H 414 (784)
.++.+..++...... +. ..+. +...+.+.+. ..+||+||++... ....+.....+ +|++.+.|
T Consensus 50 ~~~~~~~~~~~~~~~----~~---~~~~----~~~~~~~~l~---~~~~d~i~~~~~~--~~~~~~~~~~~~~~~i~~~~ 113 (348)
T cd03820 50 PKIKVIDLGDKRDSK----LL---ARFK----KLRRLRKLLK---NNKPDVVISFLTS--LLTFLASLGLKIVKLIVSEH 113 (348)
T ss_pred Cccceeecccccccc----hh---cccc----chHHHHHhhc---ccCCCEEEEcCch--HHHHHHHHhhccccEEEecC
Confidence 235555554432110 00 0000 1111222222 3589999999877 22223333344 49999999
Q ss_pred CCcccCCCCCcchhhhccccccccchhhhhHHHhcccCEEEecChHhHhhccccccccccccccccccceeeecCCCCCC
Q 003947 415 ALELTKYPDSDINWKKLDDKYHFSCQFTADLFAMNRTDFIITSTFQEIAGSKDTVGQYESHTAFSLPGLYRVVNGIDAFD 494 (784)
Q Consensus 415 ~l~~~k~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~~~~~~~~~~vgqYe~~~~f~~p~l~~~~~gi~~f~ 494 (784)
+....... ... ....++..++.+|.+++.|...... . . ....
T Consensus 114 ~~~~~~~~--~~~------------~~~~~~~~~~~~d~ii~~s~~~~~~---~-------------------~--~~~~ 155 (348)
T cd03820 114 NSPDAYKK--RLR------------RLLLRRLLYRRADAVVVLTEEDRAL---Y-------------------Y--KKFN 155 (348)
T ss_pred CCccchhh--hhH------------HHHHHHHHHhcCCEEEEeCHHHHHH---h-------------------h--ccCC
Confidence 75432100 000 0002456789999999999876410 0 0 1125
Q ss_pred CceEEecCCCCCCCCCCCcHHHHhhhcchhhhHHhhcCchhhhhhhccccCCCCCEEEEEecccCCCChHHHHHHHHHhH
Q 003947 495 PKFNIVSPGADMTIYFPYMEEKRRLKHFHSEIEELLYSPVENKEHLCVLKDSSKPILFTMARLDRVKNLTGLVEWYGKNA 574 (784)
Q Consensus 495 ~k~~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~~gll~~~~k~iIl~vGRL~~~Kgi~~LieA~~~l~ 574 (784)
.++.++|||++...+.+. ...+++.++++|++.+.||++.+++++.++.
T Consensus 156 ~~~~vi~~~~~~~~~~~~-------------------------------~~~~~~~i~~~g~~~~~K~~~~l~~~~~~l~ 204 (348)
T cd03820 156 KNVVVIPNPLPFPPEEPS-------------------------------SDLKSKRILAVGRLVPQKGFDLLIEAWAKIA 204 (348)
T ss_pred CCeEEecCCcChhhcccc-------------------------------CCCCCcEEEEEEeeccccCHHHHHHHHHHHH
Confidence 689999999998654432 0346789999999999999999999999998
Q ss_pred ccCCCeEEEEEeCCCCCCcccHHHHHHHHHHHHHHHhcCCCCcEEEccCcCCcCChhHHHHHHHccccEEEeCCCCCCCc
Q 003947 575 KLRELVNLVVVGGDRRKESKDLEEQAEMKKMYGLIDTYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFG 654 (784)
Q Consensus 575 ~~~~~v~LvIVG~g~~~~s~d~ee~~~~~~l~~li~~l~L~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fG 654 (784)
+..++++|+|+|++.+ .+.+.++++++++.++|.+.|. .+++..+++. +|+++.||.+|+||
T Consensus 205 ~~~~~~~l~i~G~~~~-----------~~~~~~~~~~~~~~~~v~~~g~------~~~~~~~~~~-ad~~i~ps~~e~~~ 266 (348)
T cd03820 205 KKHPDWKLRIVGDGPE-----------REALEALIKELGLEDRVILLGF------TKNIEEYYAK-ASIFVLTSRFEGFP 266 (348)
T ss_pred hcCCCeEEEEEeCCCC-----------HHHHHHHHHHcCCCCeEEEcCC------cchHHHHHHh-CCEEEeCccccccC
Confidence 8889999999998865 2456678889999999999993 4588999995 99999999999999
Q ss_pred HHHHHHHHcCCcEEEcCcc-ccccccccCceEEEECCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHH
Q 003947 655 LTVVEAMTCGLPTFATCNG-GPAEIIVHGKSGFHIDPYKGDQATGILVDFFEKCKVDPGHWDEISQGGLKRIQEKYTWKI 733 (784)
Q Consensus 655 ltvlEAMA~GlPVIaT~~G-G~~EiI~dg~~G~li~p~d~e~lAe~I~~~l~~ll~dp~~~~~m~~~a~~~v~~~ytw~~ 733 (784)
++++|||+||+|||+|+.+ +..+++.++.+|+++++.|+++++++|.+ +++||+.+++|++++++.+ ++|+|+.
T Consensus 267 ~~~~Ea~a~G~Pvi~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~----ll~~~~~~~~~~~~~~~~~-~~~~~~~ 341 (348)
T cd03820 267 MVLLEAMAFGLPVISFDCPTGPSEIIEDGVNGLLVPNGDVEALAEALLR----LMEDEELRKRMGANARESA-ERFSIEN 341 (348)
T ss_pred HHHHHHHHcCCCEEEecCCCchHhhhccCcceEEeCCCCHHHHHHHHHH----HHcCHHHHHHHHHHHHHHH-HHhCHHH
Confidence 9999999999999999865 56778888889999999999999999985 4589999999999997655 8999999
Q ss_pred HHHHHH
Q 003947 734 YSERLL 739 (784)
Q Consensus 734 ~a~~ll 739 (784)
+++++.
T Consensus 342 ~~~~~~ 347 (348)
T cd03820 342 IIKQWE 347 (348)
T ss_pred HHHHhc
Confidence 998875
No 53
>cd03806 GT1_ALG11_like This family is most closely related to the GT1 family of glycosyltransferases. ALG11 in yeast is involved in adding the final 1,2-linked Man to the Man5GlcNAc2-PP-Dol synthesized on the cytosolic face of the ER. The deletion analysis of ALG11 was shown to block the early steps of core biosynthesis that takes place on the cytoplasmic face of the ER and lead to a defect in the assembly of lipid-linked oligosaccharides.
Probab=100.00 E-value=1.8e-32 Score=310.17 Aligned_cols=380 Identities=17% Similarity=0.175 Sum_probs=248.2
Q ss_pred EEEEccCccccccCccCCCCcccchhhhHHHHHHHHHHHHHHHHHc--CCCcccceEEEecCCCCCCCCCc--Ccceeee
Q 003947 257 VVIFTPHGYFAQDNVLGYPDTGGQVVYILDQVRALENEMLLRIKQQ--GLDITPRILIITRLLPDAVGTTC--GQRVEKV 332 (784)
Q Consensus 257 I~ivs~h~~~~~~~~lg~p~tGG~~vyv~d~~raLe~eLa~~L~~~--GheV~~~i~VvTr~~~~~~g~~~--~~~~e~v 332 (784)
|+++.|+.. ..||.+..+++.|++| .++ ||+|+ |+|.........-. ......+
T Consensus 3 ~~f~hp~~~----------~ggg~ervl~~a~~~l--------~~~~~~~~v~----i~t~~~~~~~~~~l~~~~~~f~~ 60 (419)
T cd03806 3 VGFFHPYCN----------AGGGGERVLWCAVRAL--------QKRYPNNIVV----IYTGDLDATPEEILEKVESRFNI 60 (419)
T ss_pred EEEECCCCC----------CCCCchHHHHHHHHHH--------HHhCCCcEEE----EECCCCCCCHHHHHHHHHHhcCe
Confidence 677766654 3379999999888876 445 88888 99987543210000 0001111
Q ss_pred cCcCCeEEEEcc-CCCCcccccccccccCChhhH---HHHHHHHHHHHHHHcCCCceEEEEcCCChhHHHHHHHHhCCCc
Q 003947 333 YGTKYSDILRVP-FRTEEGIVRKWISRFEVWPYL---ETFTEDVATEIIQELQCKPDLIIGNYSDGNIVASLLAHKLDVT 408 (784)
Q Consensus 333 ~~~~~v~IlrvP-~~~~~~~~~~~isr~~l~~yl---~~f~~~~~~~i~~~~~~~pDIIh~~~~~~~lva~llar~~gvp 408 (784)
...+++.++++. .+ .|+++ ..|+.+ -.+...+...+......+||||+.+...+.. ..++....++|
T Consensus 61 ~~~~~~~~~~~~~~~-------~~~~~-~~~~r~~~~~~~~~~~~~~~~~~~~~~pDv~i~~~g~~~~-~~~~~~~~~~~ 131 (419)
T cd03806 61 ELDRPRIVFFLLKYR-------KLVEA-STYPRFTLLGQALGSMILGLEALLKLVPDIFIDTMGYPFT-YPLVRLLGGCP 131 (419)
T ss_pred ecCCCceEEEEecce-------eeecc-ccCCceeeHHHHHHHHHHHHHHHHhcCCCEEEEcCCcccH-HHHHHHhcCCe
Confidence 112234544442 11 12222 122221 2233333333333224479999988644311 11222234789
Q ss_pred EEEEecCCcccCCCCCc--chh-------------hhcccccccc---chhhhhHHHhcccCEEEecChHhHhhcccccc
Q 003947 409 QCTIAHALELTKYPDSD--INW-------------KKLDDKYHFS---CQFTADLFAMNRTDFIITSTFQEIAGSKDTVG 470 (784)
Q Consensus 409 ~V~t~H~l~~~k~~~s~--~~~-------------~~~~~~y~~~---~~~~~e~~a~~~AD~IIt~S~~~~~~~~~~vg 470 (784)
++..+| +++.-.+.- ... +......+.. .....+...++.||.||++|....+.+++..
T Consensus 132 ~i~y~h--~P~~~~d~l~~~~~~~~~~~~~~~~~~~~~~~~~k~~y~~~~~~~~~~~~~~aD~ii~~S~~~~~~~~~~~- 208 (419)
T cd03806 132 VGAYVH--YPTISTDMLQKVRSREASYNNSATIARSPVLSKAKLLYYRLFAFLYGLAGSFADVVMVNSTWTRNHIRSLW- 208 (419)
T ss_pred EEEEec--CCcchHHHHHHHhhccccccCccchhccchHHHHHHHHHHHHHHHHHHHhhcCCEEEECCHHHHHHHHHHh-
Confidence 999999 221000000 000 0000000000 0012567789999999999987766332211
Q ss_pred ccccccccccccceeeecCCCCCCCceEEecCCCCCCCCCCCcHHHHhhhcchhhhHHhhcCchhhhhhhccccCCCCCE
Q 003947 471 QYESHTAFSLPGLYRVVNGIDAFDPKFNIVSPGADMTIYFPYMEEKRRLKHFHSEIEELLYSPVENKEHLCVLKDSSKPI 550 (784)
Q Consensus 471 qYe~~~~f~~p~l~~~~~gi~~f~~k~~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~~gll~~~~k~i 550 (784)
+. ..++.||+||+|.+.|.+.... ...++++
T Consensus 209 ------------------~~---~~~~~vi~~gvd~~~~~~~~~~----------------------------~~~~~~~ 239 (419)
T cd03806 209 ------------------KR---NTKPSIVYPPCDVEELLKLPLD----------------------------EKTRENQ 239 (419)
T ss_pred ------------------Cc---CCCcEEEcCCCCHHHhcccccc----------------------------cccCCcE
Confidence 11 2488999999998776543210 0245689
Q ss_pred EEEEecccCCCChHHHHHHHHHhHccCC-----CeEEEEEeCCCCCCcccHHHHHHHHHHHHHHHhcCCCCcEEEccCcC
Q 003947 551 LFTMARLDRVKNLTGLVEWYGKNAKLRE-----LVNLVVVGGDRRKESKDLEEQAEMKKMYGLIDTYKLNGQFRWISSQM 625 (784)
Q Consensus 551 Il~vGRL~~~Kgi~~LieA~~~l~~~~~-----~v~LvIVG~g~~~~s~d~ee~~~~~~l~~li~~l~L~~~V~flG~~~ 625 (784)
|+|+||+.+.||++.+++|++++.+..+ +++|+|+|++... +...+.+.++++++++++.++|.|+|
T Consensus 240 il~vgr~~~~K~~~~li~A~~~l~~~~~~~~~~~~~lvivG~~~~~-----~~~~~~~~L~~~~~~l~l~~~V~f~g--- 311 (419)
T cd03806 240 ILSIAQFRPEKNHPLQLRAFAKLLKRLPEEIKEKIKLVLIGSCRNE-----DDEKRVEDLKLLAKELGLEDKVEFVV--- 311 (419)
T ss_pred EEEEEeecCCCCHHHHHHHHHHHHHhCcccccCceEEEEEcCCCCc-----ccHHHHHHHHHHHHHhCCCCeEEEec---
Confidence 9999999999999999999999987654 4999999997541 12235677899999999999999999
Q ss_pred CcCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcCcccc-ccccc---cCceEEEECCCCHHHHHHHHH
Q 003947 626 NRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCNGGP-AEIIV---HGKSGFHIDPYKGDQATGILV 701 (784)
Q Consensus 626 ~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMA~GlPVIaT~~GG~-~EiI~---dg~~G~li~p~d~e~lAe~I~ 701 (784)
.++.+++..+|+. +|++|+|+..|+||++++||||||+|||+++.||+ .|++. +|.+|++++ |++++|++|.
T Consensus 312 -~v~~~~l~~~l~~-adv~v~~s~~E~Fgi~~lEAMa~G~pvIa~~~ggp~~~iv~~~~~g~~G~l~~--d~~~la~ai~ 387 (419)
T cd03806 312 -NAPFEELLEELST-ASIGLHTMWNEHFGIGVVEYMAAGLIPLAHASGGPLLDIVVPWDGGPTGFLAS--TAEEYAEAIE 387 (419)
T ss_pred -CCCHHHHHHHHHh-CeEEEECCccCCcccHHHHHHHcCCcEEEEcCCCCchheeeccCCCCceEEeC--CHHHHHHHHH
Confidence 7788999999995 99999999999999999999999999999999886 57887 899999984 8999999998
Q ss_pred HHHHHhcCCH-HHHHHHHHHHHHHHHHhCCHHHHHH
Q 003947 702 DFFEKCKVDP-GHWDEISQGGLKRIQEKYTWKIYSE 736 (784)
Q Consensus 702 ~~l~~ll~dp-~~~~~m~~~a~~~v~~~ytw~~~a~ 736 (784)
+++ +++ +.++.+ .++++.+.++|||+.+.+
T Consensus 388 ~ll----~~~~~~~~~~-~~~~~~~~~~fs~~~f~~ 418 (419)
T cd03806 388 KIL----SLSEEERLRI-RRAARSSVKRFSDEEFER 418 (419)
T ss_pred HHH----hCCHHHHHHH-HHHHHHHHHhhCHHHhcc
Confidence 554 544 445555 555566779999998754
No 54
>cd03808 GT1_cap1E_like This family is most closely related to the GT1 family of glycosyltransferases. cap1E in Streptococcus pneumoniae is required for the synthesis of type 1 capsular polysaccharides.
Probab=100.00 E-value=5.8e-32 Score=290.43 Aligned_cols=356 Identities=18% Similarity=0.247 Sum_probs=257.5
Q ss_pred EEEEEccCccccccCccCCCCcccchhhhHHHHHHHHHHHHHHHHHcCCCcccceEEEecCCCCCCCCCcCcceeeecCc
Q 003947 256 NVVIFTPHGYFAQDNVLGYPDTGGQVVYILDQVRALENEMLLRIKQQGLDITPRILIITRLLPDAVGTTCGQRVEKVYGT 335 (784)
Q Consensus 256 kI~ivs~h~~~~~~~~lg~p~tGG~~vyv~d~~raLe~eLa~~L~~~GheV~~~i~VvTr~~~~~~g~~~~~~~e~v~~~ 335 (784)
||+++++. .||...++. .|++.|.++||+|+ +++....... ....
T Consensus 1 kIl~i~~~-------------~~g~~~~~~--------~l~~~L~~~g~~v~----~~~~~~~~~~----------~~~~ 45 (359)
T cd03808 1 KILHIVTV-------------DGGLYSFRL--------PLIKALRAAGYEVH----VVAPPGDELE----------ELEA 45 (359)
T ss_pred CeeEEEec-------------chhHHHHHH--------HHHHHHHhcCCeeE----EEecCCCccc----------cccc
Confidence 57777754 378888888 56667789999999 8876532211 1112
Q ss_pred CCeEEEEccCCCCcccccccccccCChhhHHHHHHHHHHHHHHHcCCCceEEEEcCCChhHHHHHHHH-hCCCcEEEEec
Q 003947 336 KYSDILRVPFRTEEGIVRKWISRFEVWPYLETFTEDVATEIIQELQCKPDLIIGNYSDGNIVASLLAH-KLDVTQCTIAH 414 (784)
Q Consensus 336 ~~v~IlrvP~~~~~~~~~~~isr~~l~~yl~~f~~~~~~~i~~~~~~~pDIIh~~~~~~~lva~llar-~~gvp~V~t~H 414 (784)
.++.+..+|..... . ..+..+. ....+.+.+. +.+||+||++...+.+.+.+.++ ..+.+++.+.|
T Consensus 46 ~~~~~~~~~~~~~~------~---~~~~~~~-~~~~~~~~~~---~~~~dvv~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 112 (359)
T cd03808 46 LGVKVIPIPLDRRG------I---NPFKDLK-ALLRLYRLLR---KERPDIVHTHTPKPGILGRLAARLAGVPKVIYTVH 112 (359)
T ss_pred CCceEEeccccccc------c---ChHhHHH-HHHHHHHHHH---hcCCCEEEEccccchhHHHHHHHHcCCCCEEEEec
Confidence 35677777764311 0 0111111 1112222222 45899999998877777777776 45567778888
Q ss_pred CCcccCCCCCcchhhhccccccccchhhhhHHHhcccCEEEecChHhHhhccccccccccccccccccceeeecCCCCCC
Q 003947 415 ALELTKYPDSDINWKKLDDKYHFSCQFTADLFAMNRTDFIITSTFQEIAGSKDTVGQYESHTAFSLPGLYRVVNGIDAFD 494 (784)
Q Consensus 415 ~l~~~k~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~~~~~~~~~~vgqYe~~~~f~~p~l~~~~~gi~~f~ 494 (784)
+........ ... ..+ ....++..++.+|.+++.|....+...+. .+.+ ..
T Consensus 113 ~~~~~~~~~-~~~-------~~~--~~~~~~~~~~~~d~ii~~s~~~~~~~~~~-------------------~~~~-~~ 162 (359)
T cd03808 113 GLGFVFTSG-GLK-------RRL--YLLLERLALRFTDKVIFQNEDDRDLALKL-------------------GIIK-KK 162 (359)
T ss_pred Ccchhhccc-hhH-------HHH--HHHHHHHHHhhccEEEEcCHHHHHHHHHh-------------------cCCC-cC
Confidence 764322110 000 000 11235567889999999998876622111 1111 13
Q ss_pred CceEEecCCCCCCCCCCCcHHHHhhhcchhhhHHhhcCchhhhhhhccccCCCCCEEEEEecccCCCChHHHHHHHHHhH
Q 003947 495 PKFNIVSPGADMTIYFPYMEEKRRLKHFHSEIEELLYSPVENKEHLCVLKDSSKPILFTMARLDRVKNLTGLVEWYGKNA 574 (784)
Q Consensus 495 ~k~~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~~gll~~~~k~iIl~vGRL~~~Kgi~~LieA~~~l~ 574 (784)
.++.+++||+|...+.+.... .+++++.|+++|++.+.||++.+++++..+.
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~----------------------------~~~~~~~i~~~G~~~~~k~~~~li~~~~~l~ 214 (359)
T cd03808 163 KTVLIPGSGVDLDRFSPSPEP----------------------------IPEDDPVFLFVARLLKDKGIDELLEAARILK 214 (359)
T ss_pred ceEEecCCCCChhhcCccccc----------------------------cCCCCcEEEEEeccccccCHHHHHHHHHHHH
Confidence 467788999998766543210 0356789999999999999999999999998
Q ss_pred ccCCCeEEEEEeCCCCCCcccHHHHHHHHHHHH-HHHhcCCCCcEEEccCcCCcCChhHHHHHHHccccEEEeCCCCCCC
Q 003947 575 KLRELVNLVVVGGDRRKESKDLEEQAEMKKMYG-LIDTYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAF 653 (784)
Q Consensus 575 ~~~~~v~LvIVG~g~~~~s~d~ee~~~~~~l~~-li~~l~L~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~f 653 (784)
+.+++++|+|+|++... ..... .+...+..++|.|+|. .+++..+++. +|++++||..|+|
T Consensus 215 ~~~~~~~l~i~G~~~~~-----------~~~~~~~~~~~~~~~~v~~~g~------~~~~~~~~~~-adi~i~ps~~e~~ 276 (359)
T cd03808 215 AKGPNVRLLLVGDGDEE-----------NPAAILEIEKLGLEGRVEFLGF------RDDVPELLAA-ADVFVLPSYREGL 276 (359)
T ss_pred hcCCCeEEEEEcCCCcc-----------hhhHHHHHHhcCCcceEEEeec------cccHHHHHHh-ccEEEecCcccCc
Confidence 87889999999998651 01111 3667778889999994 3478888885 9999999999999
Q ss_pred cHHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHH
Q 003947 654 GLTVVEAMTCGLPTFATCNGGPAEIIVHGKSGFHIDPYKGDQATGILVDFFEKCKVDPGHWDEISQGGLKRIQEKYTWKI 733 (784)
Q Consensus 654 GltvlEAMA~GlPVIaT~~GG~~EiI~dg~~G~li~p~d~e~lAe~I~~~l~~ll~dp~~~~~m~~~a~~~v~~~ytw~~ 733 (784)
|++++|||+||+|||+|+.+|..+++.++.+|++++++|+++++++|.+ ++.|++.+.++++++++++.++|+|+.
T Consensus 277 ~~~~~Ea~~~G~Pvi~s~~~~~~~~i~~~~~g~~~~~~~~~~~~~~i~~----l~~~~~~~~~~~~~~~~~~~~~~s~~~ 352 (359)
T cd03808 277 PRVLLEAMAMGRPVIATDVPGCREAVIDGVNGFLVPPGDAEALADAIER----LIEDPELRARMGQAARKRAEEEFDEEI 352 (359)
T ss_pred chHHHHHHHcCCCEEEecCCCchhhhhcCcceEEECCCCHHHHHHHHHH----HHhCHHHHHHHHHHHHHHHHHhcCHHH
Confidence 9999999999999999999999999999999999999999999999974 558999999999999999999999999
Q ss_pred HHHHHH
Q 003947 734 YSERLL 739 (784)
Q Consensus 734 ~a~~ll 739 (784)
++++++
T Consensus 353 ~~~~~~ 358 (359)
T cd03808 353 VVKKLL 358 (359)
T ss_pred HHHHhh
Confidence 999876
No 55
>cd03809 GT1_mtfB_like This family is most closely related to the GT1 family of glycosyltransferases. mtfB (mannosyltransferase B) in E. coli has been shown to direct the growth of the O9-specific polysaccharide chain. It transfers two mannoses into the position 3 of the previously synthesized polysaccharide.
Probab=100.00 E-value=1.2e-32 Score=299.51 Aligned_cols=364 Identities=20% Similarity=0.228 Sum_probs=255.3
Q ss_pred EEEEEccCccccccCccCCCCcccchhhhHHHHHHHHHHHHHHHHHcCCCcccceEEEecCCCCCCCCCcCcceeeecCc
Q 003947 256 NVVIFTPHGYFAQDNVLGYPDTGGQVVYILDQVRALENEMLLRIKQQGLDITPRILIITRLLPDAVGTTCGQRVEKVYGT 335 (784)
Q Consensus 256 kI~ivs~h~~~~~~~~lg~p~tGG~~vyv~d~~raLe~eLa~~L~~~GheV~~~i~VvTr~~~~~~g~~~~~~~e~v~~~ 335 (784)
||++++.+..++ ..||.+.|+. +|+++|++.||+|+ +++.......... ....
T Consensus 1 ~ili~~~~~~~~--------~~gG~~~~~~--------~l~~~L~~~~~~v~----~~~~~~~~~~~~~-----~~~~-- 53 (365)
T cd03809 1 RILIDARFLASR--------RPTGIGRYAR--------ELLRALLKLDPEEV----LLLLPGAPGLLLL-----PLRA-- 53 (365)
T ss_pred CEEEechhhhcC--------CCCcHHHHHH--------HHHHHHHhcCCceE----EEEecCccccccc-----cchh--
Confidence 578887666521 5799999999 66666799999998 7775532211100 0000
Q ss_pred CCeEEEEccCCCCcccccccccccCChhhHHHHHHHHHHHHHHHcCCCceEEEEcCCChhHHHHHHHHhCCCcEEEEecC
Q 003947 336 KYSDILRVPFRTEEGIVRKWISRFEVWPYLETFTEDVATEIIQELQCKPDLIIGNYSDGNIVASLLAHKLDVTQCTIAHA 415 (784)
Q Consensus 336 ~~v~IlrvP~~~~~~~~~~~isr~~l~~yl~~f~~~~~~~i~~~~~~~pDIIh~~~~~~~lva~llar~~gvp~V~t~H~ 415 (784)
.... ..... ....+.............+. ..+||+||+++...... +..++|++.++|+
T Consensus 54 -~~~~---~~~~~---------~~~~~~~~~~~~~~~~~~~~---~~~~Dii~~~~~~~~~~-----~~~~~~~i~~~hd 112 (365)
T cd03809 54 -ALRL---LLRLP---------RRLLWGLLFLLRAGDRLLLL---LLGLDLLHSPHNTAPLL-----RLRGVPVVVTIHD 112 (365)
T ss_pred -cccc---ccccc---------cccccchhhHHHHHHHHHhh---hcCCCeeeecccccCcc-----cCCCCCEEEEecc
Confidence 0000 00000 00111111111111111111 35899999998876444 6679999999998
Q ss_pred CcccCCCCCcchhhhccccccccchhhhhHHHhcccCEEEecChHhHhhccccccccccccccccccceeeecCCCCCCC
Q 003947 416 LELTKYPDSDINWKKLDDKYHFSCQFTADLFAMNRTDFIITSTFQEIAGSKDTVGQYESHTAFSLPGLYRVVNGIDAFDP 495 (784)
Q Consensus 416 l~~~k~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~~~~~~~~~~vgqYe~~~~f~~p~l~~~~~gi~~f~~ 495 (784)
+.....+...... ........++..++.+|.++++|+..++.+.+. .+++ ..
T Consensus 113 ~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~d~~i~~s~~~~~~~~~~-------------------~~~~--~~ 164 (365)
T cd03809 113 LIPLRFPEYFSPG-------FRRYFRRLLRRALRRADAIITVSEATKRDLLRY-------------------LGVP--PD 164 (365)
T ss_pred chhhhCcccCCHH-------HHHHHHHHHHHHHHHcCEEEEccHHHHHHHHHH-------------------hCcC--HH
Confidence 7654322211110 000111234567899999999998776632221 1122 56
Q ss_pred ceEEecCCCCCCCCCCCcHHHHhhhcchhhhHHhhcCchhhhhhhccccCCCCCEEEEEecccCCCChHHHHHHHHHhHc
Q 003947 496 KFNIVSPGADMTIYFPYMEEKRRLKHFHSEIEELLYSPVENKEHLCVLKDSSKPILFTMARLDRVKNLTGLVEWYGKNAK 575 (784)
Q Consensus 496 k~~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~~gll~~~~k~iIl~vGRL~~~Kgi~~LieA~~~l~~ 575 (784)
++.++|||+|...+.+....... .... ..++++|+++||+.+.||++.+++++..+.+
T Consensus 165 ~~~vi~~~~~~~~~~~~~~~~~~--------------------~~~~--~~~~~~i~~~G~~~~~K~~~~~l~~~~~~~~ 222 (365)
T cd03809 165 KIVVIPLGVDPRFRPPPAEAEVL--------------------RALY--LLPRPYFLYVGTIEPRKNLERLLEAFARLPA 222 (365)
T ss_pred HEEeeccccCccccCCCchHHHH--------------------HHhc--CCCCCeEEEeCCCccccCHHHHHHHHHHHHH
Confidence 89999999999887665433210 1111 4567899999999999999999999999998
Q ss_pred cCCCeEEEEEeCCCCCCcccHHHHHHHHHHHHHHHhcCCCCcEEEccCcCCcCChhHHHHHHHccccEEEeCCCCCCCcH
Q 003947 576 LRELVNLVVVGGDRRKESKDLEEQAEMKKMYGLIDTYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGL 655 (784)
Q Consensus 576 ~~~~v~LvIVG~g~~~~s~d~ee~~~~~~l~~li~~l~L~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGl 655 (784)
..++++|+++|.+... .......+++.++.++|.|+| .++.+++..+++. +|++++||..|+||+
T Consensus 223 ~~~~~~l~i~G~~~~~----------~~~~~~~~~~~~~~~~v~~~g----~~~~~~~~~~~~~-~d~~l~ps~~e~~~~ 287 (365)
T cd03809 223 KGPDPKLVIVGKRGWL----------NEELLARLRELGLGDRVRFLG----YVSDEELAALYRG-ARAFVFPSLYEGFGL 287 (365)
T ss_pred hcCCCCEEEecCCccc----------cHHHHHHHHHcCCCCeEEECC----CCChhHHHHHHhh-hhhhcccchhccCCC
Confidence 7778999999987541 112223336778899999999 6778899999995 999999999999999
Q ss_pred HHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHH
Q 003947 656 TVVEAMTCGLPTFATCNGGPAEIIVHGKSGFHIDPYKGDQATGILVDFFEKCKVDPGHWDEISQGGLKRIQEKYTWKIYS 735 (784)
Q Consensus 656 tvlEAMA~GlPVIaT~~GG~~EiI~dg~~G~li~p~d~e~lAe~I~~~l~~ll~dp~~~~~m~~~a~~~v~~~ytw~~~a 735 (784)
+++|||++|+|||+|+.|+..|++. .+|++++++|.++++++|.+ +++|++.+.+|++++++.+ ++|||+.++
T Consensus 288 ~~~Ea~a~G~pvI~~~~~~~~e~~~--~~~~~~~~~~~~~~~~~i~~----l~~~~~~~~~~~~~~~~~~-~~~sw~~~~ 360 (365)
T cd03809 288 PVLEAMACGTPVIASNISSLPEVAG--DAALYFDPLDPEALAAAIER----LLEDPALREELRERGLARA-KRFSWEKTA 360 (365)
T ss_pred CHHHHhcCCCcEEecCCCCccceec--CceeeeCCCCHHHHHHHHHH----HhcCHHHHHHHHHHHHHHH-HhCCHHHHH
Confidence 9999999999999999999999984 46999999999999999974 5589999999999999765 899999999
Q ss_pred HHHH
Q 003947 736 ERLL 739 (784)
Q Consensus 736 ~~ll 739 (784)
++++
T Consensus 361 ~~~~ 364 (365)
T cd03809 361 RRTL 364 (365)
T ss_pred HHHh
Confidence 9886
No 56
>cd03798 GT1_wlbH_like This family is most closely related to the GT1 family of glycosyltransferases. wlbH in Bordetella parapertussis has been shown to be required for the biosynthesis of a trisaccharide that, when attached to the B. pertussis lipopolysaccharide (LPS) core (band B), generates band A LPS.
Probab=100.00 E-value=2.2e-31 Score=286.93 Aligned_cols=285 Identities=27% Similarity=0.417 Sum_probs=231.4
Q ss_pred CCCceEEEEcCCCh-hHHHHHHHHhCCCcEEEEecCCcccCCCCCcchhhhccccccccchhhhhHHHhcccCEEEecCh
Q 003947 381 QCKPDLIIGNYSDG-NIVASLLAHKLDVTQCTIAHALELTKYPDSDINWKKLDDKYHFSCQFTADLFAMNRTDFIITSTF 459 (784)
Q Consensus 381 ~~~pDIIh~~~~~~-~lva~llar~~gvp~V~t~H~l~~~k~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~ 459 (784)
..+||+||+++... ...+..+++..++|++.+.|+.......... .........++.+|.+++.|+
T Consensus 91 ~~~~dii~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~~~-------------~~~~~~~~~~~~~d~ii~~s~ 157 (377)
T cd03798 91 RFRPDLIHAHFAYPDGFAAALLKRKLGIPLVVTLHGSDVNLLPRKR-------------LLRALLRRALRRADAVIAVSE 157 (377)
T ss_pred cCCCCEEEEeccchHHHHHHHHHHhcCCCEEEEeecchhcccCchh-------------hHHHHHHHHHhcCCeEEeCCH
Confidence 56899999997664 5667778888899999999986543321110 111234457889999999998
Q ss_pred HhHhhccccccccccccccccccceeeecCCCCCCCceEEecCCCCCCCCCCCcHHHHhhhcchhhhHHhhcCchhhhhh
Q 003947 460 QEIAGSKDTVGQYESHTAFSLPGLYRVVNGIDAFDPKFNIVSPGADMTIYFPYMEEKRRLKHFHSEIEELLYSPVENKEH 539 (784)
Q Consensus 460 ~~~~~~~~~vgqYe~~~~f~~p~l~~~~~gi~~f~~k~~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~ 539 (784)
...+...+. +. ...++.++|||+|...+.+...... ++
T Consensus 158 ~~~~~~~~~--------------------~~--~~~~~~~i~~~~~~~~~~~~~~~~~--------------------~~ 195 (377)
T cd03798 158 ALADELKAL--------------------GI--DPEKVTVIPNGVDTERFSPADRAEA--------------------RK 195 (377)
T ss_pred HHHHHHHHh--------------------cC--CCCceEEcCCCcCcccCCCcchHHH--------------------Hh
Confidence 877622211 11 2678999999999988876543221 01
Q ss_pred hccccCCCCCEEEEEecccCCCChHHHHHHHHHhHccCCCeEEEEEeCCCCCCcccHHHHHHHHHHHHHHHhcCCCCcEE
Q 003947 540 LCVLKDSSKPILFTMARLDRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYGLIDTYKLNGQFR 619 (784)
Q Consensus 540 ~gll~~~~k~iIl~vGRL~~~Kgi~~LieA~~~l~~~~~~v~LvIVG~g~~~~s~d~ee~~~~~~l~~li~~l~L~~~V~ 619 (784)
.+. ..+++.++++|++.+.||++.+++++..+.+..++++|+++|.+.. .+.+.+.++++++.++|.
T Consensus 196 ~~~--~~~~~~i~~~g~~~~~k~~~~li~~~~~~~~~~~~~~l~i~g~~~~-----------~~~~~~~~~~~~~~~~v~ 262 (377)
T cd03798 196 LGL--PEDKKVILFVGRLVPRKGIDYLIEALARLLKKRPDVHLVIVGDGPL-----------REALEALAAELGLEDRVT 262 (377)
T ss_pred ccC--CCCceEEEEeccCccccCHHHHHHHHHHHHhcCCCeEEEEEcCCcc-----------hHHHHHHHHhcCCcceEE
Confidence 111 4567899999999999999999999999988788999999998854 245677788889999999
Q ss_pred EccCcCCcCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHHHHHHH
Q 003947 620 WISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCNGGPAEIIVHGKSGFHIDPYKGDQATGI 699 (784)
Q Consensus 620 flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMA~GlPVIaT~~GG~~EiI~dg~~G~li~p~d~e~lAe~ 699 (784)
+.| .++.+++..+++. +|++++|+..|++|++++|||+||+|||+++.|+..+++.++.+|++++++|+++++++
T Consensus 263 ~~g----~~~~~~~~~~~~~-ad~~i~~~~~~~~~~~~~Ea~~~G~pvI~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~ 337 (377)
T cd03798 263 FLG----AVPHEEVPAYYAA-ADVFVLPSLREGFGLVLLEAMACGLPVVATDVGGIPEIITDGENGLLVPPGDPEALAEA 337 (377)
T ss_pred EeC----CCCHHHHHHHHHh-cCeeecchhhccCChHHHHHHhcCCCEEEecCCChHHHhcCCcceeEECCCCHHHHHHH
Confidence 999 7778999999996 99999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Q 003947 700 LVDFFEKCKVDPGHWDEISQGGLKRIQEKYTWKIYSERLLNLSGV 744 (784)
Q Consensus 700 I~~~l~~ll~dp~~~~~m~~~a~~~v~~~ytw~~~a~~ll~ly~~ 744 (784)
|.++ +++++. +++.++++.+.++|+|+.+++++.++++.
T Consensus 338 i~~~----~~~~~~--~~~~~~~~~~~~~~s~~~~~~~~~~~~~~ 376 (377)
T cd03798 338 ILRL----LADPWL--RLGRAARRRVAERFSWENVAERLLELYRE 376 (377)
T ss_pred HHHH----hcCcHH--HHhHHHHHHHHHHhhHHHHHHHHHHHHhh
Confidence 9854 468776 78899999999999999999999998763
No 57
>cd03823 GT1_ExpE7_like This family is most closely related to the GT1 family of glycosyltransferases. ExpE7 in Sinorhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucans (exopolysaccharide II).
Probab=100.00 E-value=9.3e-32 Score=290.82 Aligned_cols=353 Identities=16% Similarity=0.197 Sum_probs=244.3
Q ss_pred EEEEEccCccccccCccCCCCcccchhhhHHHHHHHHHHHHHHHHHcCCCcccceEEEecCCCCCCCCCcCcceeeecCc
Q 003947 256 NVVIFTPHGYFAQDNVLGYPDTGGQVVYILDQVRALENEMLLRIKQQGLDITPRILIITRLLPDAVGTTCGQRVEKVYGT 335 (784)
Q Consensus 256 kI~ivs~h~~~~~~~~lg~p~tGG~~vyv~d~~raLe~eLa~~L~~~GheV~~~i~VvTr~~~~~~g~~~~~~~e~v~~~ 335 (784)
||++++++..+ ..+||.+.++. .|+++|+++||+|+ +++.......... . .
T Consensus 1 kIl~i~~~~~~--------~~~gG~~~~~~--------~l~~~L~~~g~~v~----v~~~~~~~~~~~~-~--------~ 51 (359)
T cd03823 1 RILVVNHLYPP--------RSVGGAEVVAH--------DLAEALAKRGHEVA----VLTAGEDPPRQDK-E--------V 51 (359)
T ss_pred CeeEEcccCCc--------ccccchHHHHH--------HHHHHHHhcCCceE----EEeCCCCCCCccc-c--------c
Confidence 68999876653 24689999999 55566689999999 8876533211110 0 0
Q ss_pred CCeEEEEccC--CCCcccccccccccCChhhHH-HHHHHHHHHHHHHcCCCceEEEEcCCCh-hHHHHHHHHhCCCcEEE
Q 003947 336 KYSDILRVPF--RTEEGIVRKWISRFEVWPYLE-TFTEDVATEIIQELQCKPDLIIGNYSDG-NIVASLLAHKLDVTQCT 411 (784)
Q Consensus 336 ~~v~IlrvP~--~~~~~~~~~~isr~~l~~yl~-~f~~~~~~~i~~~~~~~pDIIh~~~~~~-~lva~llar~~gvp~V~ 411 (784)
.+..+...+. ......... ......+.. .+...+. .+.+ ..+||+||+|.... .......++..++|++.
T Consensus 52 ~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~-~~~~--~~~~dii~~~~~~~~~~~~~~~~~~~~~~~i~ 125 (359)
T cd03823 52 IGVVVYGRPIDEVLRSALPRD---LFHLSDYDNPAVVAEFA-RLLE--DFRPDVVHFHHLQGLGVSILRAARDRGIPIVL 125 (359)
T ss_pred ccceeeccccccccCCCchhh---hhHHHhccCHHHHHHHH-HHHH--HcCCCEEEECCccchHHHHHHHHHhcCCCEEE
Confidence 0111111110 000000000 000000000 1111222 2222 34899999998754 33445566778899999
Q ss_pred EecCCcccCCCCCcchhhhccccccccchhhhhHHHhcccCEEEecChHhHhhccccccccccccccccccceeeecCCC
Q 003947 412 IAHALELTKYPDSDINWKKLDDKYHFSCQFTADLFAMNRTDFIITSTFQEIAGSKDTVGQYESHTAFSLPGLYRVVNGID 491 (784)
Q Consensus 412 t~H~l~~~k~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~~~~~~~~~~vgqYe~~~~f~~p~l~~~~~gi~ 491 (784)
+.|+.+.... +. .......|.++++|+...+...+ .+..
T Consensus 126 ~~hd~~~~~~------~~---------------~~~~~~~d~ii~~s~~~~~~~~~--------------------~~~~ 164 (359)
T cd03823 126 TLHDYWLICP------RQ---------------GLFKKGGDAVIAPSRFLLDRYVA--------------------NGLF 164 (359)
T ss_pred EEeeeeeecc------hh---------------hhhccCCCEEEEeCHHHHHHHHH--------------------cCCC
Confidence 9998542210 00 01122339999999877652221 1221
Q ss_pred CCCCceEEecCCCCCCCCCCCcHHHHhhhcchhhhHHhhcCchhhhhhhccccCCCCCEEEEEecccCCCChHHHHHHHH
Q 003947 492 AFDPKFNIVSPGADMTIYFPYMEEKRRLKHFHSEIEELLYSPVENKEHLCVLKDSSKPILFTMARLDRVKNLTGLVEWYG 571 (784)
Q Consensus 492 ~f~~k~~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~~gll~~~~k~iIl~vGRL~~~Kgi~~LieA~~ 571 (784)
..++.+|+||+|...+.+... + .+.++++|+++|++.+.||++.+++++.
T Consensus 165 --~~~~~vi~n~~~~~~~~~~~~--------------------------~--~~~~~~~i~~~G~~~~~k~~~~li~~~~ 214 (359)
T cd03823 165 --AEKISVIRNGIDLDRAKRPRR--------------------------A--PPGGRLRFGFIGQLTPHKGVDLLLEAFK 214 (359)
T ss_pred --ccceEEecCCcChhhcccccc--------------------------C--CCCCceEEEEEecCccccCHHHHHHHHH
Confidence 468999999999987654321 0 1356788999999999999999999999
Q ss_pred HhHccCCCeEEEEEeCCCCCCcccHHHHHHHHHHHHHHHhcCCCCcEEEccCcCCcCChhHHHHHHHccccEEEeCCC-C
Q 003947 572 KNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYGLIDTYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPAL-Y 650 (784)
Q Consensus 572 ~l~~~~~~v~LvIVG~g~~~~s~d~ee~~~~~~l~~li~~l~L~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~-~ 650 (784)
++.+ ++++|+++|.+... ....... +..++|.++| .++.+++..+++. +|++++||. .
T Consensus 215 ~l~~--~~~~l~i~G~~~~~-----------~~~~~~~---~~~~~v~~~g----~~~~~~~~~~~~~-ad~~i~ps~~~ 273 (359)
T cd03823 215 RLPR--GDIELVIVGNGLEL-----------EEESYEL---EGDPRVEFLG----AYPQEEIDDFYAE-IDVLVVPSIWP 273 (359)
T ss_pred HHHh--cCcEEEEEcCchhh-----------hHHHHhh---cCCCeEEEeC----CCCHHHHHHHHHh-CCEEEEcCccc
Confidence 9877 78999999998641 1111111 5678999999 6778899999995 999999997 7
Q ss_pred CCCcHHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCC
Q 003947 651 EAFGLTVVEAMTCGLPTFATCNGGPAEIIVHGKSGFHIDPYKGDQATGILVDFFEKCKVDPGHWDEISQGGLKRIQEKYT 730 (784)
Q Consensus 651 E~fGltvlEAMA~GlPVIaT~~GG~~EiI~dg~~G~li~p~d~e~lAe~I~~~l~~ll~dp~~~~~m~~~a~~~v~~~yt 730 (784)
|+||++++|||+||+|||+|+.||..|++.++.+|++++++|.++++++|.++ ++|++.++++++++++++..
T Consensus 274 e~~~~~~~Ea~a~G~Pvi~~~~~~~~e~i~~~~~g~~~~~~d~~~l~~~i~~l----~~~~~~~~~~~~~~~~~~~~--- 346 (359)
T cd03823 274 ENFPLVIREALAAGVPVIASDIGGMAELVRDGVNGLLFPPGDAEDLAAALERL----IDDPDLLERLRAGIEPPRSI--- 346 (359)
T ss_pred CCCChHHHHHHHCCCCEEECCCCCHHHHhcCCCcEEEECCCCHHHHHHHHHHH----HhChHHHHHHHHhHHHhhhH---
Confidence 99999999999999999999999999999999999999999999999999854 46999999999999887633
Q ss_pred HHHHHHHHHHHHH
Q 003947 731 WKIYSERLLNLSG 743 (784)
Q Consensus 731 w~~~a~~ll~ly~ 743 (784)
+.++++++++|+
T Consensus 347 -~~~~~~~~~~~~ 358 (359)
T cd03823 347 -EDQAEEYLKLYR 358 (359)
T ss_pred -HHHHHHHHHHhh
Confidence 999999999885
No 58
>TIGR03087 stp1 sugar transferase, PEP-CTERM/EpsH1 system associated. Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate.
Probab=100.00 E-value=1.1e-32 Score=309.37 Aligned_cols=284 Identities=15% Similarity=0.147 Sum_probs=205.3
Q ss_pred CCCceEEEEcCCChhHHHHHHH-HhCCCcEEEEecCCcccCCCCCc--chhhhccccccc--cchhhhhHHHhcccCEEE
Q 003947 381 QCKPDLIIGNYSDGNIVASLLA-HKLDVTQCTIAHALELTKYPDSD--INWKKLDDKYHF--SCQFTADLFAMNRTDFII 455 (784)
Q Consensus 381 ~~~pDIIh~~~~~~~lva~lla-r~~gvp~V~t~H~l~~~k~~~s~--~~~~~~~~~y~~--~~~~~~e~~a~~~AD~II 455 (784)
..++|+||+++.... ..+. +..++|.|.+.|+++...+.... ..+. ....|+. ......|+..++.+|.|+
T Consensus 102 ~~~~D~v~~~~~~~~---~~~~~~~~~~p~i~~~~d~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~e~~~~~~ad~vi 177 (397)
T TIGR03087 102 AEPVDAIVVFSSAMA---QYVTPHVRGVPRIVDFVDVDSDKWLQYARTKRWP-LRWIYRREGRLLLAYERAIAARFDAAT 177 (397)
T ss_pred hCCCCEEEEeccccc---eeccccccCCCeEeehhhHHHHHHHHHHhccCcc-hhHHHHHHHHHHHHHHHHHHhhCCeEE
Confidence 468999999875432 2222 35689999999986532211000 0000 0001110 001124677889999999
Q ss_pred ecChHhHhhccccccccccccccccccceeeecCCCCCCCceEEecCCCCCCCCCCCcHHHHhhhcchhhhHHhhcCchh
Q 003947 456 TSTFQEIAGSKDTVGQYESHTAFSLPGLYRVVNGIDAFDPKFNIVSPGADMTIYFPYMEEKRRLKHFHSEIEELLYSPVE 535 (784)
Q Consensus 456 t~S~~~~~~~~~~vgqYe~~~~f~~p~l~~~~~gi~~f~~k~~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~ 535 (784)
++|+.+++...+. .+.. ..++.+||||+|.+.|.|......
T Consensus 178 ~~S~~~~~~l~~~-------------------~~~~--~~~v~vipngvd~~~f~~~~~~~~------------------ 218 (397)
T TIGR03087 178 FVSRAEAELFRRL-------------------APEA--AGRITAFPNGVDADFFSPDRDYPN------------------ 218 (397)
T ss_pred EcCHHHHHHHHHh-------------------CCCC--CCCeEEeecccchhhcCCCccccC------------------
Confidence 9999887632221 1111 468999999999988866432110
Q ss_pred hhhhhccccCCCCCEEEEEecccCCCChHHHH----HHHHHhHccCCCeEEEEEeCCCCCCcccHHHHHHHHHHHHHHHh
Q 003947 536 NKEHLCVLKDSSKPILFTMARLDRVKNLTGLV----EWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYGLIDT 611 (784)
Q Consensus 536 ~~~~~gll~~~~k~iIl~vGRL~~~Kgi~~Li----eA~~~l~~~~~~v~LvIVG~g~~~~s~d~ee~~~~~~l~~li~~ 611 (784)
.. .+++++|+|+||+++.||++.++ +++..+.+..|+++|+|+|+|+. +. +++
T Consensus 219 -----~~--~~~~~~ilf~G~l~~~k~~~~l~~~~~~~~~~l~~~~p~~~l~ivG~g~~------------~~----~~~ 275 (397)
T TIGR03087 219 -----PY--PPGKRVLVFTGAMDYWPNIDAVVWFAERVFPAVRARRPAAEFYIVGAKPS------------PA----VRA 275 (397)
T ss_pred -----CC--CCCCcEEEEEEecCCccCHHHHHHHHHHHHHHHHHHCCCcEEEEECCCCh------------HH----HHH
Confidence 01 34568999999999999999988 55666766779999999999854 11 233
Q ss_pred cCCCCcEEEccCcCCcCChhHHHHHHHccccEEEeCCC-CCCCcHHHHHHHHcCCcEEEcCccccccccccCceEEEECC
Q 003947 612 YKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPAL-YEAFGLTVVEAMTCGLPTFATCNGGPAEIIVHGKSGFHIDP 690 (784)
Q Consensus 612 l~L~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~-~E~fGltvlEAMA~GlPVIaT~~GG~~EiI~dg~~G~li~p 690 (784)
++..++|+|+|.. + ++..+++. +|++|+||. .||+|++++||||||+|||+|+.|+. .+...+.+|++++
T Consensus 276 l~~~~~V~~~G~v----~--~~~~~~~~-adv~v~Ps~~~eG~~~~~lEAma~G~PVV~t~~~~~-~i~~~~~~g~lv~- 346 (397)
T TIGR03087 276 LAALPGVTVTGSV----A--DVRPYLAH-AAVAVAPLRIARGIQNKVLEAMAMAKPVVASPEAAE-GIDALPGAELLVA- 346 (397)
T ss_pred hccCCCeEEeeec----C--CHHHHHHh-CCEEEecccccCCcccHHHHHHHcCCCEEecCcccc-cccccCCcceEeC-
Confidence 4455789999943 3 57888885 999999997 69999999999999999999987643 3334455799986
Q ss_pred CCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Q 003947 691 YKGDQATGILVDFFEKCKVDPGHWDEISQGGLKRIQEKYTWKIYSERLLNLSG 743 (784)
Q Consensus 691 ~d~e~lAe~I~~~l~~ll~dp~~~~~m~~~a~~~v~~~ytw~~~a~~ll~ly~ 743 (784)
+|++++|++|.+ +++||+.+++|+++|++++.++|||+.+++++.+++.
T Consensus 347 ~~~~~la~ai~~----ll~~~~~~~~~~~~ar~~v~~~fsw~~~~~~~~~~l~ 395 (397)
T TIGR03087 347 ADPADFAAAILA----LLANPAEREELGQAARRRVLQHYHWPRNLARLDALLE 395 (397)
T ss_pred CCHHHHHHHHHH----HHcCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHhc
Confidence 899999999974 5589999999999999999999999999999999875
No 59
>cd03811 GT1_WabH_like This family is most closely related to the GT1 family of glycosyltransferases. WabH in Klebsiella pneumoniae has been shown to transfer a GlcNAc residue from UDP-GlcNAc onto the acceptor GalUA residue in the cellular outer core.
Probab=100.00 E-value=2.6e-31 Score=284.13 Aligned_cols=272 Identities=20% Similarity=0.262 Sum_probs=213.1
Q ss_pred CCceEEEEcCC-ChhHHHHHHHHhCCCcEEEEecCCcccCCCCCcchhhhccccccccchhhhhHHHhcccCEEEecChH
Q 003947 382 CKPDLIIGNYS-DGNIVASLLAHKLDVTQCTIAHALELTKYPDSDINWKKLDDKYHFSCQFTADLFAMNRTDFIITSTFQ 460 (784)
Q Consensus 382 ~~pDIIh~~~~-~~~lva~llar~~gvp~V~t~H~l~~~k~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~~ 460 (784)
.+||+||++.. .+.+.+.+.++. ++|.+.+.|+............ . ..+...++.+|.+++.|..
T Consensus 80 ~~~dii~~~~~~~~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~~~~~-------~------~~~~~~~~~~d~ii~~s~~ 145 (353)
T cd03811 80 EKPDVVISHLTTTPNVLALLAARL-GTKLIVWEHNSLSLELKRKLRL-------L------LLIRKLYRRADKIVAVSEG 145 (353)
T ss_pred cCCCEEEEcCccchhHHHHHHhhc-CCceEEEEcCcchhhhccchhH-------H------HHHHhhccccceEEEeccc
Confidence 48999999988 555555555544 8999999998754321110000 0 2345678999999999987
Q ss_pred hHhhccccccccccccccccccceeeecCCCCCCCceEEecCCCCCCCCCCCcHHHHhhhcchhhhHHhhcCchhhhhhh
Q 003947 461 EIAGSKDTVGQYESHTAFSLPGLYRVVNGIDAFDPKFNIVSPGADMTIYFPYMEEKRRLKHFHSEIEELLYSPVENKEHL 540 (784)
Q Consensus 461 ~~~~~~~~vgqYe~~~~f~~p~l~~~~~gi~~f~~k~~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~~ 540 (784)
.++...+. .+.+ ..++.+||||+|.+.+.+...... ..
T Consensus 146 ~~~~~~~~-------------------~~~~--~~~~~vi~~~~~~~~~~~~~~~~~---------------------~~ 183 (353)
T cd03811 146 VKEDLLKL-------------------LGIP--PDKIEVIYNPIDIEEIRALAEEPL---------------------EL 183 (353)
T ss_pred hhhhHHHh-------------------hcCC--ccccEEecCCcChhhcCcccchhh---------------------hc
Confidence 76522211 1111 468999999999987765433211 01
Q ss_pred ccccCCCCCEEEEEecccCCCChHHHHHHHHHhHccCCCeEEEEEeCCCCCCcccHHHHHHHHHHHHHHHhcCCCCcEEE
Q 003947 541 CVLKDSSKPILFTMARLDRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYGLIDTYKLNGQFRW 620 (784)
Q Consensus 541 gll~~~~k~iIl~vGRL~~~Kgi~~LieA~~~l~~~~~~v~LvIVG~g~~~~s~d~ee~~~~~~l~~li~~l~L~~~V~f 620 (784)
+. +.++++|+++||+.+.||++.+++++.++.+.+++++|+++|+++. .+.+.+.++++++.++|.|
T Consensus 184 ~~--~~~~~~i~~~g~~~~~k~~~~~i~~~~~l~~~~~~~~l~i~G~~~~-----------~~~~~~~~~~~~~~~~v~~ 250 (353)
T cd03811 184 GI--PPDGPVILAVGRLSPQKGFDTLIRAFALLRKEGPDARLVILGDGPL-----------REELEALAKELGLADRVHF 250 (353)
T ss_pred CC--CCCceEEEEEecchhhcChHHHHHHHHHhhhcCCCceEEEEcCCcc-----------HHHHHHHHHhcCCCccEEE
Confidence 11 4577899999999999999999999999988788999999998854 2456688899999999999
Q ss_pred ccCcCCcCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHHHHHHHH
Q 003947 621 ISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCNGGPAEIIVHGKSGFHIDPYKGDQATGIL 700 (784)
Q Consensus 621 lG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMA~GlPVIaT~~GG~~EiI~dg~~G~li~p~d~e~lAe~I 700 (784)
.|.. +++..+++. +|++++||..|++|++++|||+||+|||+|+.||..|++.++.+|++++++|.+++++.+
T Consensus 251 ~g~~------~~~~~~~~~-~d~~i~ps~~e~~~~~~~Ea~~~G~PvI~~~~~~~~e~i~~~~~g~~~~~~~~~~~~~~~ 323 (353)
T cd03811 251 LGFQ------SNPYPYLKA-ADLFVLSSRYEGFPNVLLEAMALGTPVVATDCPGPREILEDGENGLLVPVGDEAALAAAA 323 (353)
T ss_pred eccc------CCHHHHHHh-CCEEEeCcccCCCCcHHHHHHHhCCCEEEcCCCChHHHhcCCCceEEECCCCHHHHHHHH
Confidence 9943 257788885 999999999999999999999999999999999999999999999999999999986555
Q ss_pred HHHHHHhcCCHHHHHHHHHHHHHHHHHhCC
Q 003947 701 VDFFEKCKVDPGHWDEISQGGLKRIQEKYT 730 (784)
Q Consensus 701 ~~~l~~ll~dp~~~~~m~~~a~~~v~~~yt 730 (784)
..+ ..+..+++.+.++++++++.+.++|+
T Consensus 324 ~~i-~~~~~~~~~~~~~~~~~~~~~~~~~~ 352 (353)
T cd03811 324 LAL-LDLLLDPELRERLAAAARERVAREYS 352 (353)
T ss_pred HHH-HhccCChHHHHHHHHHHHHHHHHHhc
Confidence 433 47889999999999999999988886
No 60
>TIGR02918 accessory Sec system glycosylation protein GtfA. Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus. Members are associated with glycosylation of serine-rich glycoproteins exported by the accessory Sec system.
Probab=100.00 E-value=4e-31 Score=304.23 Aligned_cols=280 Identities=20% Similarity=0.224 Sum_probs=211.0
Q ss_pred CCCceEEEEcCCChhHHHHHHHHhCCCcEEEEecCCcccCCCCCc--chhhhccccccccchhhhhHHHhcccCEEEecC
Q 003947 381 QCKPDLIIGNYSDGNIVASLLAHKLDVTQCTIAHALELTKYPDSD--INWKKLDDKYHFSCQFTADLFAMNRTDFIITST 458 (784)
Q Consensus 381 ~~~pDIIh~~~~~~~lva~llar~~gvp~V~t~H~l~~~k~~~s~--~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S 458 (784)
..++||+|++.+.....+ ++.....+|.+.++|+-+........ ..|. ..|.+ .....+.+|.||++|
T Consensus 209 ~~~~di~i~dr~~~~~~~-~~~~~~~~~~v~~lH~~h~~~~~~~~~~~~~~---~~y~~------~~~~~~~~D~iI~~S 278 (500)
T TIGR02918 209 LTKKDIIILDRSTGIGQA-VLENKGPAKLGVVVHAEHFSESATNETYILWN---NYYEY------QFSNADYIDFFITAT 278 (500)
T ss_pred CCCCCEEEEcCCcccchH-HHhcCCCceEEEEEChhhhcCccCcchhHHHH---HHHHH------HHhchhhCCEEEECC
Confidence 458999999776643333 44556689999999985432211110 1121 11111 122467789999999
Q ss_pred hHhHhhccccccccccccccccccceeeecCCCCCCCceEEecCCCCCCCCCCCcHHHHhhhcchhhhHHhhcCchhhhh
Q 003947 459 FQEIAGSKDTVGQYESHTAFSLPGLYRVVNGIDAFDPKFNIVSPGADMTIYFPYMEEKRRLKHFHSEIEELLYSPVENKE 538 (784)
Q Consensus 459 ~~~~~~~~~~vgqYe~~~~f~~p~l~~~~~gi~~f~~k~~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~ 538 (784)
+..++.+.+..++| +.. .+++.+||||++...+.|..
T Consensus 279 ~~~~~~l~~~~~~~----------------~~~--~~ki~viP~g~~~~~~~~~~------------------------- 315 (500)
T TIGR02918 279 DIQNQILKNQFKKY----------------YNI--EPRIYTIPVGSLDELQYPEQ------------------------- 315 (500)
T ss_pred HHHHHHHHHHhhhh----------------cCC--CCcEEEEcCCCcccccCccc-------------------------
Confidence 87766444433222 111 56899999998754433210
Q ss_pred hhccccCCCCCEEEEEecccCCCChHHHHHHHHHhHccCCCeEEEEEeCCCCCCcccHHHHHHHHHHHHHHHhcCCCCcE
Q 003947 539 HLCVLKDSSKPILFTMARLDRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYGLIDTYKLNGQF 618 (784)
Q Consensus 539 ~~gll~~~~k~iIl~vGRL~~~Kgi~~LieA~~~l~~~~~~v~LvIVG~g~~~~s~d~ee~~~~~~l~~li~~l~L~~~V 618 (784)
.+++..|+++||+.+.||++.+++|++++.+..|+++|+|+|+|+. .+.++++++++++.++|
T Consensus 316 ------~r~~~~il~vGrl~~~Kg~~~li~A~~~l~~~~p~~~l~i~G~G~~-----------~~~l~~~i~~~~l~~~V 378 (500)
T TIGR02918 316 ------ERKPFSIITASRLAKEKHIDWLVKAVVKAKKSVPELTFDIYGEGGE-----------KQKLQKIINENQAQDYI 378 (500)
T ss_pred ------ccCCeEEEEEeccccccCHHHHHHHHHHHHhhCCCeEEEEEECchh-----------HHHHHHHHHHcCCCCeE
Confidence 2344689999999999999999999999998889999999999843 36788999999999999
Q ss_pred EEccCcCCcCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcCcc-ccccccccCceEEEECC----CC-
Q 003947 619 RWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCNG-GPAEIIVHGKSGFHIDP----YK- 692 (784)
Q Consensus 619 ~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMA~GlPVIaT~~G-G~~EiI~dg~~G~li~p----~d- 692 (784)
.|+| .. ++..+++ .+|++|+||..||||++++||||||+|||+|+.+ |++|+|.+|.+|+++++ .|
T Consensus 379 ~f~G----~~---~~~~~~~-~adv~v~pS~~Egfgl~~lEAma~G~PVI~~dv~~G~~eiI~~g~nG~lv~~~~~~~d~ 450 (500)
T TIGR02918 379 HLKG----HR---NLSEVYK-DYELYLSASTSEGFGLTLMEAVGSGLGMIGFDVNYGNPTFIEDNKNGYLIPIDEEEDDE 450 (500)
T ss_pred EEcC----CC---CHHHHHH-hCCEEEEcCccccccHHHHHHHHhCCCEEEecCCCCCHHHccCCCCEEEEeCCccccch
Confidence 9999 33 3455666 4999999999999999999999999999999986 89999999999999984 33
Q ss_pred ---HHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Q 003947 693 ---GDQATGILVDFFEKCKVDPGHWDEISQGGLKRIQEKYTWKIYSERLLNLSGV 744 (784)
Q Consensus 693 ---~e~lAe~I~~~l~~ll~dp~~~~~m~~~a~~~v~~~ytw~~~a~~ll~ly~~ 744 (784)
++++|++|. +++ +++.+++|+++|++.+ ++|||+.+++++.++++.
T Consensus 451 ~~~~~~la~~I~----~ll-~~~~~~~~~~~a~~~a-~~fs~~~v~~~w~~ll~~ 499 (500)
T TIGR02918 451 DQIITALAEKIV----EYF-NSNDIDAFHEYSYQIA-EGFLTANIIEKWKKLVRE 499 (500)
T ss_pred hHHHHHHHHHHH----HHh-ChHHHHHHHHHHHHHH-HhcCHHHHHHHHHHHHhh
Confidence 677777776 445 4557999999999976 889999999999998763
No 61
>cd04946 GT1_AmsK_like This family is most closely related to the GT1 family of glycosyltransferases. AmsK is involved in the biosynthesis of amylovoran, which functions as a virulence factor. It functions as a glycosyl transferase which transfers galactose from UDP-galactose to a lipid-linked amylovoran-subunit precursor. The members of this family are found mainly in bacteria and Archaea.
Probab=99.98 E-value=1.4e-30 Score=293.67 Aligned_cols=276 Identities=15% Similarity=0.216 Sum_probs=217.4
Q ss_pred CCCceEEEEcCCCh-hHHHHHHHHhCCCc-EEEEecCCcccCCCCCcchhhhccccccccchhhhhHHHhcccCEEEecC
Q 003947 381 QCKPDLIIGNYSDG-NIVASLLAHKLDVT-QCTIAHALELTKYPDSDINWKKLDDKYHFSCQFTADLFAMNRTDFIITST 458 (784)
Q Consensus 381 ~~~pDIIh~~~~~~-~lva~llar~~gvp-~V~t~H~l~~~k~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S 458 (784)
..++|++|++.... +..+.+++++.+.+ +|.++|+..... ......+. ......++.+|.||++|
T Consensus 125 ~~~~~v~~sy~~~~~~~~~~~l~~~~~~~~~i~~~Hg~d~~~--------~~~~~~~~-----~~~~~~~~~~d~ii~~S 191 (407)
T cd04946 125 DGQGTVFYSYWLHETAYALALLKKEYLRKRVISRAHGYDLYE--------DRYPSGYI-----PLRRYLLSSLDAVFPCS 191 (407)
T ss_pred ccCceEEEEecCchHHHHHHHHHHhcCCceEEEEeccchhhh--------hhccccch-----HHHHHHHhcCCEEEECC
Confidence 46789999866554 44555677777766 899999753211 00111111 11234578999999999
Q ss_pred hHhHhhccccccccccccccccccceeeecCCCCCCCceEEecCCCCCCCCCCCcHHHHhhhcchhhhHHhhcCchhhhh
Q 003947 459 FQEIAGSKDTVGQYESHTAFSLPGLYRVVNGIDAFDPKFNIVSPGADMTIYFPYMEEKRRLKHFHSEIEELLYSPVENKE 538 (784)
Q Consensus 459 ~~~~~~~~~~vgqYe~~~~f~~p~l~~~~~gi~~f~~k~~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~ 538 (784)
....+.+.+.. +. ...++.+++||++...+.+..
T Consensus 192 ~~~~~~l~~~~-------------------~~--~~~ki~vi~~gv~~~~~~~~~------------------------- 225 (407)
T cd04946 192 EQGRNYLQKRY-------------------PA--YKEKIKVSYLGVSDPGIISKP------------------------- 225 (407)
T ss_pred HHHHHHHHHHC-------------------CC--ccccEEEEECCcccccccCCC-------------------------
Confidence 98876333221 12 256899999999986554320
Q ss_pred hhccccCCCCCEEEEEecccCCCChHHHHHHHHHhHccCC--CeEEEEEeCCCCCCcccHHHHHHHHHHHHHHHhcCCCC
Q 003947 539 HLCVLKDSSKPILFTMARLDRVKNLTGLVEWYGKNAKLRE--LVNLVVVGGDRRKESKDLEEQAEMKKMYGLIDTYKLNG 616 (784)
Q Consensus 539 ~~gll~~~~k~iIl~vGRL~~~Kgi~~LieA~~~l~~~~~--~v~LvIVG~g~~~~s~d~ee~~~~~~l~~li~~l~L~~ 616 (784)
..++++.|+++||+.+.||++.+++|+.++.+.+| ++.++++|+|+. .+.+++++++.+..+
T Consensus 226 -----~~~~~~~il~~Grl~~~Kg~~~li~a~~~l~~~~p~~~l~~~iiG~g~~-----------~~~l~~~~~~~~~~~ 289 (407)
T cd04946 226 -----SKDDTLRIVSCSYLVPVKRVDLIIKALAALAKARPSIKIKWTHIGGGPL-----------EDTLKELAESKPENI 289 (407)
T ss_pred -----CCCCCEEEEEeeccccccCHHHHHHHHHHHHHhCCCceEEEEEEeCchH-----------HHHHHHHHHhcCCCc
Confidence 03456889999999999999999999999988765 567788998843 356777888888889
Q ss_pred cEEEccCcCCcCChhHHHHHHHc-cccEEEeCCCCCCCcHHHHHHHHcCCcEEEcCccccccccccCceEEEECCC-CHH
Q 003947 617 QFRWISSQMNRVRNGELYRYICD-TKGAFVQPALYEAFGLTVVEAMTCGLPTFATCNGGPAEIIVHGKSGFHIDPY-KGD 694 (784)
Q Consensus 617 ~V~flG~~~~~v~~~el~~~la~-aadvfV~PS~~E~fGltvlEAMA~GlPVIaT~~GG~~EiI~dg~~G~li~p~-d~e 694 (784)
+|.|+| .++.+++.++++. .+|+||.||..||||++++||||||+|||+|+.||..|++.++.+|+++++. |++
T Consensus 290 ~V~f~G----~v~~~e~~~~~~~~~~~v~v~~S~~Eg~p~~llEAma~G~PVIas~vgg~~e~i~~~~~G~l~~~~~~~~ 365 (407)
T cd04946 290 SVNFTG----ELSNSEVYKLYKENPVDVFVNLSESEGLPVSIMEAMSFGIPVIATNVGGTPEIVDNGGNGLLLSKDPTPN 365 (407)
T ss_pred eEEEec----CCChHHHHHHHhhcCCCEEEeCCccccccHHHHHHHHcCCCEEeCCCCCcHHHhcCCCcEEEeCCCCCHH
Confidence 999999 7778899999974 3789999999999999999999999999999999999999999999999874 899
Q ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHH
Q 003947 695 QATGILVDFFEKCKVDPGHWDEISQGGLKRIQEKYTWKIYSERLL 739 (784)
Q Consensus 695 ~lAe~I~~~l~~ll~dp~~~~~m~~~a~~~v~~~ytw~~~a~~ll 739 (784)
+++++|.++ ++||+.+++|+++|+++++++|||+...+++.
T Consensus 366 ~la~~I~~l----l~~~~~~~~m~~~ar~~~~~~f~~~~~~~~~~ 406 (407)
T cd04946 366 ELVSSLSKF----IDNEEEYQTMREKAREKWEENFNASKNYREFA 406 (407)
T ss_pred HHHHHHHHH----HhCHHHHHHHHHHHHHHHHHHcCHHHhHHHhc
Confidence 999999854 46999999999999999999999999998875
No 62
>PLN02275 transferase, transferring glycosyl groups
Probab=99.97 E-value=3.2e-29 Score=279.15 Aligned_cols=316 Identities=12% Similarity=0.048 Sum_probs=211.5
Q ss_pred HHHHHHHcCC-CcccceEEEecCCCCCCCCCcCcceeeecCcCCeEEEEccCCCCcccccccccccCChh---hHHHH--
Q 003947 295 MLLRIKQQGL-DITPRILIITRLLPDAVGTTCGQRVEKVYGTKYSDILRVPFRTEEGIVRKWISRFEVWP---YLETF-- 368 (784)
Q Consensus 295 La~~L~~~Gh-eV~~~i~VvTr~~~~~~g~~~~~~~e~v~~~~~v~IlrvP~~~~~~~~~~~isr~~l~~---yl~~f-- 368 (784)
++.+++++|| +|+ |+|...+ + .........+++++|+|. .... . +...++. |+...
T Consensus 24 ~~~~l~~~~~~~v~----vi~~~~~---~-----~~~~~~~~~~v~v~r~~~-~~~~--~---~~~~~~~~~~~~~~~~~ 85 (371)
T PLN02275 24 HALSLARQASFQVD----VVAYGGS---E-----PIPALLNHPSIHIHLMVQ-PRLL--Q---RLPRVLYALALLLKVAI 85 (371)
T ss_pred HHHHHHhcCCceEE----EEEecCC---C-----CCHHHhcCCcEEEEECCC-cccc--c---ccccchHHHHHHHHHHH
Confidence 5566788886 698 8874321 1 111122334699999985 2210 0 0111222 22211
Q ss_pred -HHHHHHHHHHHcCCCceEEEEcCCCh---hHHHHHHHHhCCCcEEEEecCCcccCCCCCcchhhhccccccccchhhhh
Q 003947 369 -TEDVATEIIQELQCKPDLIIGNYSDG---NIVASLLAHKLDVTQCTIAHALELTKYPDSDINWKKLDDKYHFSCQFTAD 444 (784)
Q Consensus 369 -~~~~~~~i~~~~~~~pDIIh~~~~~~---~lva~llar~~gvp~V~t~H~l~~~k~~~s~~~~~~~~~~y~~~~~~~~e 444 (784)
...+...+.. ...+||+||+|.+.+ .+.+.++++..++|+|++.|+++....... ........++.. ..+
T Consensus 86 ~~~~~~~~~~~-~~~~~DvV~~~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~~~~~---~~~~~~~~~~~~--~~e 159 (371)
T PLN02275 86 QFLMLLWFLCV-KIPRPDVFLVQNPPSVPTLAVVKLACWLRRAKFVIDWHNFGYTLLALS---LGRSHPLVRLYR--WYE 159 (371)
T ss_pred HHHHHHHHHHh-hCCCCCEEEEeCCCCcHHHHHHHHHHHHhCCCEEEEcCCccHHHHhcc---cCCCCHHHHHHH--HHH
Confidence 1112222111 256999999987554 456777888889999999998642110000 000001111111 236
Q ss_pred HHHhcccCEEEecChHhHhhccccccccccccccccccceeeecCCCCCCCceEEecCCCCCCCCCCCcHHHHhhhcchh
Q 003947 445 LFAMNRTDFIITSTFQEIAGSKDTVGQYESHTAFSLPGLYRVVNGIDAFDPKFNIVSPGADMTIYFPYMEEKRRLKHFHS 524 (784)
Q Consensus 445 ~~a~~~AD~IIt~S~~~~~~~~~~vgqYe~~~~f~~p~l~~~~~gi~~f~~k~~VIpnGvD~~~f~p~~~~~~rl~~~~~ 524 (784)
+..++.||.||++|+...+...+. .|+ ++.+|+||+ .+.|.|......
T Consensus 160 ~~~~~~ad~ii~~S~~~~~~l~~~-------------------~g~-----~i~vi~n~~-~~~f~~~~~~~~------- 207 (371)
T PLN02275 160 RHYGKMADGHLCVTKAMQHELDQN-------------------WGI-----RATVLYDQP-PEFFRPASLEIR------- 207 (371)
T ss_pred HHHHhhCCEEEECCHHHHHHHHHh-------------------cCC-----CeEEECCCC-HHHcCcCCchhc-------
Confidence 678999999999998877632111 122 278999994 456655432110
Q ss_pred hhHHhhcCchhhhhhhccccCCCCCEEEEEecccCCCChHHHHHHHHHhH-----------------ccCCCeEEEEEeC
Q 003947 525 EIEELLYSPVENKEHLCVLKDSSKPILFTMARLDRVKNLTGLVEWYGKNA-----------------KLRELVNLVVVGG 587 (784)
Q Consensus 525 ~~~~~l~~~~~~~~~~gll~~~~k~iIl~vGRL~~~Kgi~~LieA~~~l~-----------------~~~~~v~LvIVG~ 587 (784)
+ ..+.+.+++++||+.+.||++.+++|+..+. +..++++|+|+|+
T Consensus 208 -----------------~-~~~~~~~i~~~grl~~~k~~~~li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~i~l~ivG~ 269 (371)
T PLN02275 208 -----------------L-RPNRPALVVSSTSWTPDEDFGILLEAAVMYDRRVAARLNESDSASGKQSLYPRLLFIITGK 269 (371)
T ss_pred -----------------c-cCCCcEEEEEeCceeccCCHHHHHHHHHHHHhhhhhccccccccccccccCCCeEEEEEeC
Confidence 0 0223457889999999999999999998874 2357899999999
Q ss_pred CCCCCcccHHHHHHHHHHHHHHHhcCCCCcEEEccCcCCcCChhHHHHHHHccccEEEeCC---CCCCCcHHHHHHHHcC
Q 003947 588 DRRKESKDLEEQAEMKKMYGLIDTYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPA---LYEAFGLTVVEAMTCG 664 (784)
Q Consensus 588 g~~~~s~d~ee~~~~~~l~~li~~l~L~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS---~~E~fGltvlEAMA~G 664 (784)
|+. .++++++++++++.+ +.|++ ..++.+++..+|+. +|++|.|+ ..|+||++++||||||
T Consensus 270 G~~-----------~~~l~~~~~~~~l~~-v~~~~---~~~~~~~~~~~l~~-aDv~v~~~~s~~~e~~p~~llEAmA~G 333 (371)
T PLN02275 270 GPQ-----------KAMYEEKISRLNLRH-VAFRT---MWLEAEDYPLLLGS-ADLGVSLHTSSSGLDLPMKVVDMFGCG 333 (371)
T ss_pred CCC-----------HHHHHHHHHHcCCCc-eEEEc---CCCCHHHHHHHHHh-CCEEEEeccccccccccHHHHHHHHCC
Confidence 965 367889999999976 88765 14678899999995 99999863 2489999999999999
Q ss_pred CcEEEcCccccccccccCceEEEECCCCHHHHHHHHHH
Q 003947 665 LPTFATCNGGPAEIIVHGKSGFHIDPYKGDQATGILVD 702 (784)
Q Consensus 665 lPVIaT~~GG~~EiI~dg~~G~li~p~d~e~lAe~I~~ 702 (784)
+|||+|+.||.+|+|++|.+|++++ |++++|++|.+
T Consensus 334 ~PVVa~~~gg~~eiv~~g~~G~lv~--~~~~la~~i~~ 369 (371)
T PLN02275 334 LPVCAVSYSCIGELVKDGKNGLLFS--SSSELADQLLE 369 (371)
T ss_pred CCEEEecCCChHHHccCCCCeEEEC--CHHHHHHHHHH
Confidence 9999999999999999999999996 68999999864
No 63
>cd03804 GT1_wbaZ_like This family is most closely related to the GT1 family of glycosyltransferases. wbaZ in Salmonella enterica has been shown to possess the mannosyl transferase activity. The members of this family are found in certain bacteria and Archaea.
Probab=99.97 E-value=1.7e-29 Score=277.57 Aligned_cols=264 Identities=20% Similarity=0.257 Sum_probs=190.3
Q ss_pred CCCceEEEEcCCChhHHHHHHHHhCCCcEEEEecCCcccCCCCCcc------hhhhccccccccchhhhhHHHhcccCEE
Q 003947 381 QCKPDLIIGNYSDGNIVASLLAHKLDVTQCTIAHALELTKYPDSDI------NWKKLDDKYHFSCQFTADLFAMNRTDFI 454 (784)
Q Consensus 381 ~~~pDIIh~~~~~~~lva~llar~~gvp~V~t~H~l~~~k~~~s~~------~~~~~~~~y~~~~~~~~e~~a~~~AD~I 454 (784)
..++|+||++.... +..+.+..++|.+..+|+.....+...+. .+......+........+...++++|.|
T Consensus 81 ~~~~D~v~~~~~~~---~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~i 157 (351)
T cd03804 81 LSGYDLVISSSHAV---AKGVITRPDQLHICYCHTPMRYAWDLYHDYLKESGLGKRLALRLLLHYLRIWDRRSAARVDYF 157 (351)
T ss_pred ccCCCEEEEcCcHH---hccccCCCCCcEEEEeCCchHHHhcCchHhhhhcccchhhHHHHHHHHHHHHHHHHhcCCCEE
Confidence 45899999876532 22222556788888888632111110000 0000000000011112345668999999
Q ss_pred EecChHhHhhccccccccccccccccccceeeecCCCCCCCceEEecCCCCCCCCCCCcHHHHhhhcchhhhHHhhcCch
Q 003947 455 ITSTFQEIAGSKDTVGQYESHTAFSLPGLYRVVNGIDAFDPKFNIVSPGADMTIYFPYMEEKRRLKHFHSEIEELLYSPV 534 (784)
Q Consensus 455 It~S~~~~~~~~~~vgqYe~~~~f~~p~l~~~~~gi~~f~~k~~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~ 534 (784)
+++|+..++...+. +..+..+|+||+|.+.|.+..
T Consensus 158 i~~S~~~~~~~~~~------------------------~~~~~~vi~~~~d~~~~~~~~--------------------- 192 (351)
T cd03804 158 IANSRFVARRIKKY------------------------YGRDATVIYPPVDTDRFTPAE--------------------- 192 (351)
T ss_pred EECCHHHHHHHHHH------------------------hCCCcEEECCCCCHhhcCcCC---------------------
Confidence 99999887632211 134568999999987665421
Q ss_pred hhhhhhccccCCCCCEEEEEecccCCCChHHHHHHHHHhHccCCCeEEEEEeCCCCCCcccHHHHHHHHHHHHHHHhcCC
Q 003947 535 ENKEHLCVLKDSSKPILFTMARLDRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYGLIDTYKL 614 (784)
Q Consensus 535 ~~~~~~gll~~~~k~iIl~vGRL~~~Kgi~~LieA~~~l~~~~~~v~LvIVG~g~~~~s~d~ee~~~~~~l~~li~~l~L 614 (784)
..++.++++||+.+.||++.+++|+.+++ ++|+|+|+|+. .+.+++ +.
T Consensus 193 -----------~~~~~il~~G~~~~~K~~~~li~a~~~~~-----~~l~ivG~g~~-----------~~~l~~-----~~ 240 (351)
T cd03804 193 -----------EKEDYYLSVGRLVPYKRIDLAIEAFNKLG-----KRLVVIGDGPE-----------LDRLRA-----KA 240 (351)
T ss_pred -----------CCCCEEEEEEcCccccChHHHHHHHHHCC-----CcEEEEECChh-----------HHHHHh-----hc
Confidence 23457899999999999999999998763 78999999853 122222 45
Q ss_pred CCcEEEccCcCCcCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHH
Q 003947 615 NGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCNGGPAEIIVHGKSGFHIDPYKGD 694 (784)
Q Consensus 615 ~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMA~GlPVIaT~~GG~~EiI~dg~~G~li~p~d~e 694 (784)
.++|+|+| .++.+++..+++. +|++|+||. |+||++++|||+||+|||+++.||..|++.++.+|++++++|++
T Consensus 241 ~~~V~~~g----~~~~~~~~~~~~~-ad~~v~ps~-e~~g~~~~Eama~G~Pvi~~~~~~~~e~i~~~~~G~~~~~~~~~ 314 (351)
T cd03804 241 GPNVTFLG----RVSDEELRDLYAR-ARAFLFPAE-EDFGIVPVEAMASGTPVIAYGKGGALETVIDGVTGILFEEQTVE 314 (351)
T ss_pred CCCEEEec----CCCHHHHHHHHHh-CCEEEECCc-CCCCchHHHHHHcCCCEEEeCCCCCcceeeCCCCEEEeCCCCHH
Confidence 68999999 7778899999995 999999999 99999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHH
Q 003947 695 QATGILVDFFEKCKVDPGHWDEISQGGLKRIQEKYTWKIYSERL 738 (784)
Q Consensus 695 ~lAe~I~~~l~~ll~dp~~~~~m~~~a~~~v~~~ytw~~~a~~l 738 (784)
+++++|..+ ++|++ .+++++++++ ++|+|+.+.+++
T Consensus 315 ~la~~i~~l----~~~~~---~~~~~~~~~~-~~~~~~~~~~~~ 350 (351)
T cd03804 315 SLAAAVERF----EKNED---FDPQAIRAHA-ERFSESRFREKI 350 (351)
T ss_pred HHHHHHHHH----HhCcc---cCHHHHHHHH-HhcCHHHHHHHh
Confidence 999999754 46773 2344455555 679999998875
No 64
>cd04949 GT1_gtfA_like This family is most closely related to the GT1 family of glycosyltransferases and is named after gtfA in Streptococcus gordonii, where it plays a role in the O-linked glycosylation of GspB, a cell surface glycoprotein involved in platelet binding. In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltra
Probab=99.97 E-value=4.8e-29 Score=275.94 Aligned_cols=273 Identities=21% Similarity=0.243 Sum_probs=211.2
Q ss_pred CCceEEEEcCCChhHHHHHHHHhCCCcEEEEecCCcccCCCCC-cchhhhccccccccchhhhhHHHhcccCEEEecChH
Q 003947 382 CKPDLIIGNYSDGNIVASLLAHKLDVTQCTIAHALELTKYPDS-DINWKKLDDKYHFSCQFTADLFAMNRTDFIITSTFQ 460 (784)
Q Consensus 382 ~~pDIIh~~~~~~~lva~llar~~gvp~V~t~H~l~~~k~~~s-~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~~ 460 (784)
.++|+||++....... .++......+.+.++|+......... ...|+. .+. .....++.+|.||++|+.
T Consensus 98 ~~~diii~~~~~~~~~-~~~~~~~~~~~i~~~h~~~~~~~~~~~~~~~~~---~~~------~~~~~~~~~d~ii~~s~~ 167 (372)
T cd04949 98 TKPDVFILDRPTLDGQ-ALLNMKKAAKVVVVLHSNHVSDNNDPVHSLINN---FYE------YVFENLDKVDGVIVATEQ 167 (372)
T ss_pred CCCCEEEECCccccch-hHHhccCCceEEEEEChHHhCCcccccccccch---hhH------HHHhChhhCCEEEEccHH
Confidence 6899999987765333 23444455677889997543221110 011111 111 111236789999999988
Q ss_pred hHhhccccccccccccccccccceeeecCCCCCCCceEEecCCCCCCCCCCCcHHHHhhhcchhhhHHhhcCchhhhhhh
Q 003947 461 EIAGSKDTVGQYESHTAFSLPGLYRVVNGIDAFDPKFNIVSPGADMTIYFPYMEEKRRLKHFHSEIEELLYSPVENKEHL 540 (784)
Q Consensus 461 ~~~~~~~~vgqYe~~~~f~~p~l~~~~~gi~~f~~k~~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~~ 540 (784)
.++.+.+..+ . ..++.+||||++...+.+...
T Consensus 168 ~~~~l~~~~~-------------------~---~~~v~~ip~g~~~~~~~~~~~-------------------------- 199 (372)
T cd04949 168 QKQDLQKQFG-------------------N---YNPIYTIPVGSIDPLKLPAQF-------------------------- 199 (372)
T ss_pred HHHHHHHHhC-------------------C---CCceEEEcccccChhhcccch--------------------------
Confidence 7764332211 1 235889999999876655320
Q ss_pred ccccCCCCCEEEEEecccCCCChHHHHHHHHHhHccCCCeEEEEEeCCCCCCcccHHHHHHHHHHHHHHHhcCCCCcEEE
Q 003947 541 CVLKDSSKPILFTMARLDRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYGLIDTYKLNGQFRW 620 (784)
Q Consensus 541 gll~~~~k~iIl~vGRL~~~Kgi~~LieA~~~l~~~~~~v~LvIVG~g~~~~s~d~ee~~~~~~l~~li~~l~L~~~V~f 620 (784)
...+++.++++||+.+.||++.+++++.++.+..|+++|+|+|.|.. ...+...++++++.++|.+
T Consensus 200 ---~~~~~~~i~~vgrl~~~K~~~~li~a~~~l~~~~~~~~l~i~G~g~~-----------~~~~~~~~~~~~~~~~v~~ 265 (372)
T cd04949 200 ---KQRKPHKIITVARLAPEKQLDQLIKAFAKVVKQVPDATLDIYGYGDE-----------EEKLKELIEELGLEDYVFL 265 (372)
T ss_pred ---hhcCCCeEEEEEccCcccCHHHHHHHHHHHHHhCCCcEEEEEEeCch-----------HHHHHHHHHHcCCcceEEE
Confidence 02356789999999999999999999999998889999999999854 2456677788999999999
Q ss_pred ccCcCCcCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcCcc-ccccccccCceEEEECCCCHHHHHHH
Q 003947 621 ISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCNG-GPAEIIVHGKSGFHIDPYKGDQATGI 699 (784)
Q Consensus 621 lG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMA~GlPVIaT~~G-G~~EiI~dg~~G~li~p~d~e~lAe~ 699 (784)
.|+. +++.++++. +|++|.||..|+||++++|||+||+|||+++.+ |+.+++.++.+|++++++|++++|++
T Consensus 266 ~g~~------~~~~~~~~~-ad~~v~~S~~Eg~~~~~lEAma~G~PvI~~~~~~g~~~~v~~~~~G~lv~~~d~~~la~~ 338 (372)
T cd04949 266 KGYT------RDLDEVYQK-AQLSLLTSQSEGFGLSLMEALSHGLPVISYDVNYGPSEIIEDGENGYLVPKGDIEALAEA 338 (372)
T ss_pred cCCC------CCHHHHHhh-hhEEEecccccccChHHHHHHhCCCCEEEecCCCCcHHHcccCCCceEeCCCcHHHHHHH
Confidence 9943 357888885 999999999999999999999999999999987 89999999999999999999999999
Q ss_pred HHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHH
Q 003947 700 LVDFFEKCKVDPGHWDEISQGGLKRIQEKYTWKIYSERL 738 (784)
Q Consensus 700 I~~~l~~ll~dp~~~~~m~~~a~~~v~~~ytw~~~a~~l 738 (784)
|.. +++|++.+++|++++++.+ ++|||+.+++++
T Consensus 339 i~~----ll~~~~~~~~~~~~a~~~~-~~~s~~~~~~~w 372 (372)
T cd04949 339 IIE----LLNDPKLLQKFSEAAYENA-ERYSEENVWEKW 372 (372)
T ss_pred HHH----HHcCHHHHHHHHHHHHHHH-HHhhHHHHHhcC
Confidence 985 4589999999999999995 999999998764
No 65
>COG0297 GlgA Glycogen synthase [Carbohydrate transport and metabolism]
Probab=99.97 E-value=1.6e-28 Score=277.64 Aligned_cols=437 Identities=16% Similarity=0.161 Sum_probs=289.9
Q ss_pred eEEEEEccCccccccCccCCCCcccchhhhHHHHHHHHHHHHHHHHHcCCCcccceEEEecCCCCCCCCCcCcceeeec-
Q 003947 255 FNVVIFTPHGYFAQDNVLGYPDTGGQVVYILDQVRALENEMLLRIKQQGLDITPRILIITRLLPDAVGTTCGQRVEKVY- 333 (784)
Q Consensus 255 mkI~ivs~h~~~~~~~~lg~p~tGG~~vyv~d~~raLe~eLa~~L~~~GheV~~~i~VvTr~~~~~~g~~~~~~~e~v~- 333 (784)
|||+.++....|- -++||....+- .|.+.|++.|++|. |+.+.++.... .+....+.+.
T Consensus 1 M~Il~v~~E~~p~-------vK~GGLaDv~~--------alpk~L~~~g~~v~----v~lP~y~~~~~-~~~~~~~~~~~ 60 (487)
T COG0297 1 MKILFVASEIFPF-------VKTGGLADVVG--------ALPKALAKRGVDVR----VLLPSYPKVQK-EWRDLLKVVGK 60 (487)
T ss_pred CcceeeeeeecCc-------cccCcHHHHHH--------HhHHHHHhcCCeEE----EEcCCchhhhh-hhccccceeeE
Confidence 7899988877642 47899988888 45556799999999 88888773222 2222111110
Q ss_pred ------CcCCeEEEEccCCC--Ccc-cc--ccccccc--CChh------hHHHHHHHHHHHHHHHcC--CCceEEEEcCC
Q 003947 334 ------GTKYSDILRVPFRT--EEG-IV--RKWISRF--EVWP------YLETFTEDVATEIIQELQ--CKPDLIIGNYS 392 (784)
Q Consensus 334 ------~~~~v~IlrvP~~~--~~~-~~--~~~isr~--~l~~------yl~~f~~~~~~~i~~~~~--~~pDIIh~~~~ 392 (784)
+.....+....... .+- ++ ...-+|. ..+. ....|...++..+ .... ..|||||+|+|
T Consensus 61 ~~~~~~~~~~~~~~~~~~~~~~v~~~lid~~~~f~r~~~~~~~~~d~~~Rf~~F~~a~~~~~-~~~~~~~~pDIvH~hDW 139 (487)
T COG0297 61 FGVLKGGRAQLFIVKEYGKDGGVDLYLIDNPALFKRPDSTLYGYYDNAERFAFFSLAAAELA-PLGLISWLPDIVHAHDW 139 (487)
T ss_pred eeeeecccceEEEEEeecccCCCcEEEecChhhcCccccccCCCCcHHHHHHHHHHHHHHHh-hhcCCCCCCCEEEeecH
Confidence 00111111111100 000 00 1111221 1111 2233443333333 2212 47999999999
Q ss_pred ChhHHHHHHHHh----CCCcEEEEecCCcccCCCC-Ccchhhhccc-ccc-----ccchhhhhHHHhcccCEEEecChHh
Q 003947 393 DGNIVASLLAHK----LDVTQCTIAHALELTKYPD-SDINWKKLDD-KYH-----FSCQFTADLFAMNRTDFIITSTFQE 461 (784)
Q Consensus 393 ~~~lva~llar~----~gvp~V~t~H~l~~~k~~~-s~~~~~~~~~-~y~-----~~~~~~~e~~a~~~AD~IIt~S~~~ 461 (784)
..++++.+++.. ..+|.|+|+|++....... ....+..+.. .|. +-.+....+-.+..||.|.|+|+..
T Consensus 140 qt~L~~~~lk~~~~~~~~i~tVfTIHNl~~qG~~~~~~~~~lgLp~~~~~~~~l~~~~~~~~lK~gi~~ad~vttVSptY 219 (487)
T COG0297 140 QTGLLPAYLKQRYRSGYIIPTVFTIHNLAYQGLFRLQYLEELGLPFEAYASFGLEFYGQISFLKGGLYYADAVTTVSPTY 219 (487)
T ss_pred HHHHHHHHHhhcccccccCCeEEEEeeceeecccchhhHHHhcCCHHHhhhceeeecCcchhhhhhheeccEEEEECHHH
Confidence 999999999984 4799999999986433211 1111111110 111 1122334566789999999999988
Q ss_pred HhhccccccccccccccccccceeeecCCCCCCCceEEecCCCCCCCCCCCcHHHHhhhcchhhhHHhhcCchhhhhhhc
Q 003947 462 IAGSKDTVGQYESHTAFSLPGLYRVVNGIDAFDPKFNIVSPGADMTIYFPYMEEKRRLKHFHSEIEELLYSPVENKEHLC 541 (784)
Q Consensus 462 ~~~~~~~vgqYe~~~~f~~p~l~~~~~gi~~f~~k~~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~~g 541 (784)
+.... ...|. ..+-++.+ ....++.-|-||+|.+.+.|.++......-.........-+.....+++|
T Consensus 220 a~Ei~--t~~~g----~gl~g~l~------~~~~~l~GI~NgiD~~~wnp~~d~~~~~~y~~~~~~~k~~nk~~L~~~~g 287 (487)
T COG0297 220 AGEIY--TPEYG----EGLEGLLS------WRSGKLSGILNGIDYDLWNPETDPYIAANYSAEVLPAKAENKVALQERLG 287 (487)
T ss_pred HHhhc--ccccc----ccchhhhh------hccccEEEEEeeEEecccCcccccchhccCCccchhhhHHHHHHHHHHhC
Confidence 77443 11221 11222211 12458899999999999999876532211111111124445667788899
Q ss_pred cccCCCCCEEEEEecccCCCChHHHHHHHHHhHccCCCeEEEEEeCCCCCCcccHHHHHHHHHHHHHHHhcCCCCcEEEc
Q 003947 542 VLKDSSKPILFTMARLDRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYGLIDTYKLNGQFRWI 621 (784)
Q Consensus 542 ll~~~~k~iIl~vGRL~~~Kgi~~LieA~~~l~~~~~~v~LvIVG~g~~~~s~d~ee~~~~~~l~~li~~l~L~~~V~fl 621 (784)
+..+.+.|++.++||+..+||++.+++++..+.+.. +++++.|.|.. ...+.+..+++.+.. ++...
T Consensus 288 L~~~~~~pl~~~vsRl~~QKG~dl~~~~i~~~l~~~--~~~vilG~gd~---------~le~~~~~la~~~~~--~~~~~ 354 (487)
T COG0297 288 LDVDLPGPLFGFVSRLTAQKGLDLLLEAIDELLEQG--WQLVLLGTGDP---------ELEEALRALASRHPG--RVLVV 354 (487)
T ss_pred CCCCCCCcEEEEeeccccccchhHHHHHHHHHHHhC--ceEEEEecCcH---------HHHHHHHHHHHhcCc--eEEEE
Confidence 866678899999999999999999999999998754 99999999933 345677888887764 44433
Q ss_pred cCcCCcCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcCcccccccccc--------CceEEEECCCCH
Q 003947 622 SSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCNGGPAEIIVH--------GKSGFHIDPYKG 693 (784)
Q Consensus 622 G~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMA~GlPVIaT~~GG~~EiI~d--------g~~G~li~p~d~ 693 (784)
- ..+. .+.+.+...+|++++||++|+||++-++||..|+++|+...||.++.|.+ ..+|+.+.+.++
T Consensus 355 i----~~~~-~la~~i~agaD~~lmPSrfEPcGL~ql~amryGtvpIv~~tGGLadTV~~~~~~~~~~~gtGf~f~~~~~ 429 (487)
T COG0297 355 I----GYDE-PLAHLIYAGADVILMPSRFEPCGLTQLYAMRYGTLPIVRETGGLADTVVDRNEWLIQGVGTGFLFLQTNP 429 (487)
T ss_pred e----eecH-HHHHHHHhcCCEEEeCCcCcCCcHHHHHHHHcCCcceEcccCCccceecCccchhccCceeEEEEecCCH
Confidence 2 2233 44444444699999999999999999999999999999999999999986 469999999999
Q ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHh
Q 003947 694 DQATGILVDFFEKCKVDPGHWDEISQGGLKRIQEKYTWKIYSERLLNLSGVY 745 (784)
Q Consensus 694 e~lAe~I~~~l~~ll~dp~~~~~m~~~a~~~v~~~ytw~~~a~~ll~ly~~~ 745 (784)
++++.+|..++.-....+..|+.+..++.. .+|+|+..+++|.++|+..
T Consensus 430 ~~l~~al~rA~~~y~~~~~~w~~~~~~~m~---~d~sw~~sa~~y~~lY~~~ 478 (487)
T COG0297 430 DHLANALRRALVLYRAPPLLWRKVQPNAMG---ADFSWDLSAKEYVELYKPL 478 (487)
T ss_pred HHHHHHHHHHHHHhhCCHHHHHHHHHhhcc---cccCchhHHHHHHHHHHHH
Confidence 999999999885444444549999888887 6899999999999999964
No 66
>PHA01630 putative group 1 glycosyl transferase
Probab=99.96 E-value=1.3e-28 Score=269.92 Aligned_cols=258 Identities=14% Similarity=0.124 Sum_probs=189.2
Q ss_pred EcCCChhHHHHHHHHhCCCcEEEEecCCcccCCCCCcchhhhccccccccchhhhhHHH-hcccCEEEecChHhHhhccc
Q 003947 389 GNYSDGNIVASLLAHKLDVTQCTIAHALELTKYPDSDINWKKLDDKYHFSCQFTADLFA-MNRTDFIITSTFQEIAGSKD 467 (784)
Q Consensus 389 ~~~~~~~lva~llar~~gvp~V~t~H~l~~~k~~~s~~~~~~~~~~y~~~~~~~~e~~a-~~~AD~IIt~S~~~~~~~~~ 467 (784)
.|....++..+...++.|+|+++++|+... ... ..+... .+.+|.||++|....+...+
T Consensus 52 ~~~~~~~~~~~~~~~~~~~~~v~e~~~~~~------------------l~~--~~~~~~~~~~ad~ii~~S~~~~~~l~~ 111 (331)
T PHA01630 52 YYTIFNSMLFWKGIPHVGKNIVFEVADTDA------------------ISH--TALYFFRNQPVDEIVVPSQWSKNAFYT 111 (331)
T ss_pred ehhhhhHHHHHhhccccCCceEEEEEeech------------------hhH--HHHHHHhhccCCEEEECCHHHHHHHHH
Confidence 444444556666666778999999997210 000 112334 67899999999888763211
Q ss_pred cccccccccccccccceeeecCCCCCCCceEEecCCCCCCCCCCCcHHHHhhhcchhhhHHhhcCchhhhhhhccccCCC
Q 003947 468 TVGQYESHTAFSLPGLYRVVNGIDAFDPKFNIVSPGADMTIYFPYMEEKRRLKHFHSEIEELLYSPVENKEHLCVLKDSS 547 (784)
Q Consensus 468 ~vgqYe~~~~f~~p~l~~~~~gi~~f~~k~~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~~gll~~~~ 547 (784)
.|++. ..++.+||||+|.+.|.|.... ..+
T Consensus 112 --------------------~g~~~-~~~i~vIpNGVd~~~f~~~~~~-----------------------------~~~ 141 (331)
T PHA01630 112 --------------------SGLKI-PQPIYVIPHNLNPRMFEYKPKE-----------------------------KPH 141 (331)
T ss_pred --------------------cCCCC-CCCEEEECCCCCHHHcCCCccc-----------------------------cCC
Confidence 12221 3589999999999877654210 124
Q ss_pred CCEEEEEecccCCCChHHHHHHHHHhHccCCCeEEEEEeCCCCCCcccHHHHHHHHHHHHHHHhcCCCCcEEEccCcCCc
Q 003947 548 KPILFTMARLDRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYGLIDTYKLNGQFRWISSQMNR 627 (784)
Q Consensus 548 k~iIl~vGRL~~~Kgi~~LieA~~~l~~~~~~v~LvIVG~g~~~~s~d~ee~~~~~~l~~li~~l~L~~~V~flG~~~~~ 627 (784)
+.+++++|++.+.||++.|++|++++.+..++++++++|++... .++ .++.+ +.| .
T Consensus 142 ~~vl~~~g~~~~~Kg~d~Li~A~~~l~~~~~~~~llivG~~~~~-----------~~l------~~~~~---~~~----~ 197 (331)
T PHA01630 142 PCVLAILPHSWDRKGGDIVVKIFHELQNEGYDFYFLIKSSNMLD-----------PRL------FGLNG---VKT----P 197 (331)
T ss_pred CEEEEEeccccccCCHHHHHHHHHHHHhhCCCEEEEEEeCcccc-----------hhh------ccccc---eec----c
Confidence 45777888999999999999999999887889999999976431 011 12222 233 5
Q ss_pred CChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcCccccccccccCceEEEECC-----------------
Q 003947 628 VRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCNGGPAEIIVHGKSGFHIDP----------------- 690 (784)
Q Consensus 628 v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMA~GlPVIaT~~GG~~EiI~dg~~G~li~p----------------- 690 (784)
++.+++..+|+. +|+||+||..|+||++++||||||+|||+|+.||..|++.++.+|+++++
T Consensus 198 v~~~~l~~~y~~-aDv~v~pS~~E~fgl~~lEAMA~G~PVIas~~gg~~E~i~~~~ng~lv~~~~~~~~~~~~~~~~G~~ 276 (331)
T PHA01630 198 LPDDDIYSLFAG-CDILFYPVRGGAFEIPVIEALALGLDVVVTEKGAWSEWVLSNLDVYWIKSGRKPKLWYTNPIHVGYF 276 (331)
T ss_pred CCHHHHHHHHHh-CCEEEECCccccCChHHHHHHHcCCCEEEeCCCCchhhccCCCceEEeeecccccccccCCcccccc
Confidence 677899999995 99999999999999999999999999999999999999999988887753
Q ss_pred --CCHHHHHHHHHHHHHHhcCC--HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHh
Q 003947 691 --YKGDQATGILVDFFEKCKVD--PGHWDEISQGGLKRIQEKYTWKIYSERLLNLSGVY 745 (784)
Q Consensus 691 --~d~e~lAe~I~~~l~~ll~d--p~~~~~m~~~a~~~v~~~ytw~~~a~~ll~ly~~~ 745 (784)
.|.+++++++.+.+ .| ++.++++..++.+.+.++|||+.++++++++|+.|
T Consensus 277 v~~~~~~~~~~ii~~l----~~~~~~~~~~~~~~~~~~~~~~fs~~~ia~k~~~l~~~~ 331 (331)
T PHA01630 277 LDPDIEDAYQKLLEAL----ANWTPEKKKENLEGRAILYRENYSYNAIAKMWEKILEKY 331 (331)
T ss_pred cCCCHHHHHHHHHHHH----hCCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhcC
Confidence 26778888887544 44 24445555555555679999999999999999754
No 67
>PLN02501 digalactosyldiacylglycerol synthase
Probab=99.96 E-value=1.3e-27 Score=273.37 Aligned_cols=275 Identities=11% Similarity=0.119 Sum_probs=194.8
Q ss_pred CCCceEEEEcCCCh-hHH--HHHHHHhCCCcEEEEecCCcccCCCCCcchhhhccccccccchhhhhHHHhcccCEEEec
Q 003947 381 QCKPDLIIGNYSDG-NIV--ASLLAHKLDVTQCTIAHALELTKYPDSDINWKKLDDKYHFSCQFTADLFAMNRTDFIITS 457 (784)
Q Consensus 381 ~~~pDIIh~~~~~~-~lv--a~llar~~gvp~V~t~H~l~~~k~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~ 457 (784)
..+|||||.+.+.. ++. |..+|++++ |+|.++|+.... |... + .......+..+.......-.+||.|++.
T Consensus 432 ~f~PDVVHLatP~~LGw~~~Glr~ArKl~-PVVasyHTny~e-Yl~~--y--~~g~L~~~llk~l~~~v~r~hcD~VIaP 505 (794)
T PLN02501 432 SKDADIAILEEPEHLNWYHHGKRWTDKFN-HVVGVVHTNYLE-YIKR--E--KNGALQAFFVKHINNWVTRAYCHKVLRL 505 (794)
T ss_pred ccCCCEEEECCchhhccHHHHHHHHHHcC-CeEEEEeCCcHH-HHhH--h--cchhHHHHHHHHHHHHHHHhhCCEEEcC
Confidence 45899999998876 666 888999999 999999986432 1100 0 0000000000000011111128999999
Q ss_pred ChHhHhhccccccccccccccccccceeeecCCCCCCCceEEecCCCCCCCCCCCcHHHHhhhcchhhhHHhhcCchhhh
Q 003947 458 TFQEIAGSKDTVGQYESHTAFSLPGLYRVVNGIDAFDPKFNIVSPGADMTIYFPYMEEKRRLKHFHSEIEELLYSPVENK 537 (784)
Q Consensus 458 S~~~~~~~~~~vgqYe~~~~f~~p~l~~~~~gi~~f~~k~~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~ 537 (784)
|..... + . ...+..| ||||++.|.|......+
T Consensus 506 S~atq~-------------------L-------~--~~vI~nV-nGVDte~F~P~~r~~~~------------------- 537 (794)
T PLN02501 506 SAATQD-------------------L-------P--KSVICNV-HGVNPKFLKIGEKVAEE------------------- 537 (794)
T ss_pred CHHHHH-------------------h-------c--ccceeec-ccccccccCCcchhHHH-------------------
Confidence 965542 0 0 1112222 69999999887553321
Q ss_pred hhhccccCCCCCEEEEEecccCCCChHHHHHHHHHhHccCCCeEEEEEeCCCCCCcccHHHHHHHHHHHHHHHhcCCCCc
Q 003947 538 EHLCVLKDSSKPILFTMARLDRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYGLIDTYKLNGQ 617 (784)
Q Consensus 538 ~~~gll~~~~k~iIl~vGRL~~~Kgi~~LieA~~~l~~~~~~v~LvIVG~g~~~~s~d~ee~~~~~~l~~li~~l~L~~~ 617 (784)
..+|. ....+.++|+|||.+.||++.|++|++.+.+..++++|+|+|+|+. .+.+++++.++++ +
T Consensus 538 r~lgi--~~~~kgiLfVGRLa~EKGld~LLeAla~L~~~~pnvrLvIVGDGP~-----------reeLe~la~eLgL--~ 602 (794)
T PLN02501 538 RELGQ--QAFSKGAYFLGKMVWAKGYRELIDLLAKHKNELDGFNLDVFGNGED-----------AHEVQRAAKRLDL--N 602 (794)
T ss_pred HhcCC--ccccCceEEEEcccccCCHHHHHHHHHHHHhhCCCeEEEEEcCCcc-----------HHHHHHHHHHcCC--E
Confidence 12343 2233458999999999999999999999887778999999999975 3567888888887 4
Q ss_pred EEEccCcCCcCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHHHHH
Q 003947 618 FRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCNGGPAEIIVHGKSGFHIDPYKGDQAT 697 (784)
Q Consensus 618 V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMA~GlPVIaT~~GG~~EiI~dg~~G~li~p~d~e~lA 697 (784)
|.|+|.+. +...+|+ ++|+||+||..|+||++++||||||+|||+|+.||. +++.++.+|+.+ +|.++++
T Consensus 603 V~FLG~~d------d~~~lya-saDVFVlPS~sEgFGlVlLEAMA~GlPVVATd~pG~-e~V~~g~nGll~--~D~EafA 672 (794)
T PLN02501 603 LNFLKGRD------HADDSLH-GYKVFINPSISDVLCTATAEALAMGKFVVCADHPSN-EFFRSFPNCLTY--KTSEDFV 672 (794)
T ss_pred EEecCCCC------CHHHHHH-hCCEEEECCCcccchHHHHHHHHcCCCEEEecCCCC-ceEeecCCeEec--CCHHHHH
Confidence 89999433 2346777 499999999999999999999999999999999985 447778788865 6899999
Q ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Q 003947 698 GILVDFFEKCKVDPGHWDEISQGGLKRIQEKYTWKIYSERLLNLSGV 744 (784)
Q Consensus 698 e~I~~~l~~ll~dp~~~~~m~~~a~~~v~~~ytw~~~a~~ll~ly~~ 744 (784)
++|.+++ .|+..+..+++ ...|||+..++++++....
T Consensus 673 eAI~~LL----sd~~~rl~~~a------~~~~SWeAaadrLle~~~~ 709 (794)
T PLN02501 673 AKVKEAL----ANEPQPLTPEQ------RYNLSWEAATQRFMEYSDL 709 (794)
T ss_pred HHHHHHH----hCchhhhHHHH------HhhCCHHHHHHHHHHhhcc
Confidence 9998554 56654433322 2489999999999998764
No 68
>cd03793 GT1_Glycogen_synthase_GSY2_like Glycogen synthase, which is most closely related to the GT1 family of glycosyltransferases, catalyzes the transfer of a glucose molecule from UDP-glucose to a terminal branch of a glycogen molecule, a rate-limit step of glycogen biosynthesis. GSY2, the member of this family in S. cerevisiae, has been shown to possess glycogen synthase activity.
Probab=99.96 E-value=1.2e-26 Score=263.44 Aligned_cols=335 Identities=16% Similarity=0.151 Sum_probs=208.5
Q ss_pred CCCceEEEEcCCChhHHHHHHH-HhCCCcEEEEecCCcccCCCCC---cch-------hhhccccccccchhhhhHHHhc
Q 003947 381 QCKPDLIIGNYSDGNIVASLLA-HKLDVTQCTIAHALELTKYPDS---DIN-------WKKLDDKYHFSCQFTADLFAMN 449 (784)
Q Consensus 381 ~~~pDIIh~~~~~~~lva~lla-r~~gvp~V~t~H~l~~~k~~~s---~~~-------~~~~~~~y~~~~~~~~e~~a~~ 449 (784)
..++||+|+|.|..+..+..++ +..++|.|+|.|+.....+... +++ +.....+..+..+...|+.+..
T Consensus 146 ~~~~dViH~HeWm~g~a~~~lK~~~~~VptVfTtHAT~~GR~l~~g~~~~y~~l~~~~~d~eA~~~~I~~r~~iE~~aa~ 225 (590)
T cd03793 146 DEPAVVAHFHEWQAGVGLPLLRKRKVDVSTIFTTHATLLGRYLCAGNVDFYNNLDYFDVDKEAGKRGIYHRYCIERAAAH 225 (590)
T ss_pred CCCCeEEEEcchhHhHHHHHHHHhCCCCCEEEEecccccccccccCCcccchhhhhcchhhhhhcccchHHHHHHHHHHh
Confidence 4689999999999999888888 5678999999998876553211 111 1111112233344456889999
Q ss_pred ccCEEEecChHhHhhccccccccccccccccccceeeecCCCCCCCceEEecCCCCCCCCCCCcHHHHhhhcchhhhHHh
Q 003947 450 RTDFIITSTFQEIAGSKDTVGQYESHTAFSLPGLYRVVNGIDAFDPKFNIVSPGADMTIYFPYMEEKRRLKHFHSEIEEL 529 (784)
Q Consensus 450 ~AD~IIt~S~~~~~~~~~~vgqYe~~~~f~~p~l~~~~~gi~~f~~k~~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~ 529 (784)
.||.++|+|..+....+..+ +.+ +++ |||||+|.+.|.+..+........+..|.+.
T Consensus 226 ~Ad~fttVS~it~~E~~~Ll-------------------~~~--pd~--ViPNGid~~~f~~~~e~~~~~~~~k~ki~~f 282 (590)
T cd03793 226 CAHVFTTVSEITAYEAEHLL-------------------KRK--PDV--VLPNGLNVKKFSALHEFQNLHAQSKEKINEF 282 (590)
T ss_pred hCCEEEECChHHHHHHHHHh-------------------CCC--CCE--EeCCCcchhhcccchhhhhhhHHhhhhhhHH
Confidence 99999999999887554432 222 334 9999999999887654322111111111111
Q ss_pred hcCchhhhhhhccccCCCCCEEEE-EecccC-CCChHHHHHHHHHhHcc----CCC---eEEEEEeCCCCCCcc-cHHHH
Q 003947 530 LYSPVENKEHLCVLKDSSKPILFT-MARLDR-VKNLTGLVEWYGKNAKL----REL---VNLVVVGGDRRKESK-DLEEQ 599 (784)
Q Consensus 530 l~~~~~~~~~~gll~~~~k~iIl~-vGRL~~-~Kgi~~LieA~~~l~~~----~~~---v~LvIVG~g~~~~s~-d~ee~ 599 (784)
.....+.++++ ++++++++| +||++. .||++.+|+|++++... ..+ +-|+|+=++...-.. .....
T Consensus 283 --~~~~~~~~~~~--~~d~tli~f~~GR~e~~nKGiDvlIeAl~rLn~~l~~~~~~~tVvafii~p~~~~~~~~~~l~g~ 358 (590)
T cd03793 283 --VRGHFYGHYDF--DLDKTLYFFTAGRYEFSNKGADMFLEALARLNYLLKVEGSDTTVVAFFIMPAKTNNFNVESLKGQ 358 (590)
T ss_pred --HHHHHhhhcCC--CCCCeEEEEEeeccccccCCHHHHHHHHHHHHHHHHhcCCCCeEEEEEEecCccCCcCHHhhcch
Confidence 11123455665 667777766 899998 99999999999988641 222 334444333110000 00000
Q ss_pred HH-------H------------------------------------------------------------HHHHHHHHhc
Q 003947 600 AE-------M------------------------------------------------------------KKMYGLIDTY 612 (784)
Q Consensus 600 ~~-------~------------------------------------------------------------~~l~~li~~l 612 (784)
+. + +.+...+++.
T Consensus 359 ~~~~~l~~~~~~i~~~i~~~~~~~~l~~~~~~~~~~~~~~~~~~~kr~~~~~~~~~~~p~~tH~~~~~~~D~il~~~r~~ 438 (590)
T cd03793 359 AVRKQLRDTVNSVKEKIGKRLFEAALKGKLPDLEELLDKEDKVMLKRRIFALQRHSLPPVVTHNMVDDANDPILNHIRRI 438 (590)
T ss_pred HHHHHHHHHHHHHHHHhhhhhhhHhhccCCCChhhhcchhhHHHHHHHHHhhccCCCCCeeeecCCcCccCHHHHHHHHh
Confidence 00 0 1111222223
Q ss_pred CCC----Cc--EEEcc---CcCCcCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcCcccc----cccc
Q 003947 613 KLN----GQ--FRWIS---SQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCNGGP----AEII 679 (784)
Q Consensus 613 ~L~----~~--V~flG---~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMA~GlPVIaT~~GG~----~EiI 679 (784)
+|- ++ |.|.+ ..+|.+-..+.+++++ .+|++|+||++|+||++++||||||+|||+|+.+|+ .|++
T Consensus 439 ~l~N~~~drVkvif~P~~L~~~~~~~g~~y~E~~~-g~dl~v~PS~yE~fG~~~lEAma~G~PvI~t~~~gf~~~v~E~v 517 (590)
T cd03793 439 QLFNSPEDRVKVVFHPEFLSSTNPLLGLDYEEFVR-GCHLGVFPSYYEPWGYTPAECTVMGIPSITTNLSGFGCFMEEHI 517 (590)
T ss_pred cCcCCCCCeEEEEEcccccCCCCCcCCcchHHHhh-hceEEEeccccCCCCcHHHHHHHcCCCEEEccCcchhhhhHHHh
Confidence 332 22 44444 1122333445777777 499999999999999999999999999999999999 5666
Q ss_pred ccC-ceEEEECCCC---HHHHHHHHHHHHHHhcCCHHHHHHHHHHHH-HHHHHhCCHHHHHHHHHHHHHH
Q 003947 680 VHG-KSGFHIDPYK---GDQATGILVDFFEKCKVDPGHWDEISQGGL-KRIQEKYTWKIYSERLLNLSGV 744 (784)
Q Consensus 680 ~dg-~~G~li~p~d---~e~lAe~I~~~l~~ll~dp~~~~~m~~~a~-~~v~~~ytw~~~a~~ll~ly~~ 744 (784)
.++ ..|+.+.+.+ ..+.++.|.+++.++.+. +.++++.++++ ++..+.|+|+.+++.|.+.|..
T Consensus 518 ~~~~~~gi~V~~r~~~~~~e~v~~La~~m~~~~~~-~~r~~~~~r~~~~r~s~~f~W~~~~~~Y~~A~~~ 586 (590)
T cd03793 518 EDPESYGIYIVDRRFKSPDESVQQLTQYMYEFCQL-SRRQRIIQRNRTERLSDLLDWRNLGRYYRKARQL 586 (590)
T ss_pred ccCCCceEEEecCCccchHHHHHHHHHHHHHHhCC-cHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 554 3577776322 233333444444444444 56777777665 3444899999999999998863
No 69
>PRK00726 murG undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase; Provisional
Probab=99.95 E-value=6.7e-26 Score=250.39 Aligned_cols=343 Identities=13% Similarity=0.085 Sum_probs=232.9
Q ss_pred eEEEEEccCccccccCccCCCCcccchhhhHHHHHHHHHHHHHHHHHcCCCcccceEEEecCCCCCCCCCcCcceeeecC
Q 003947 255 FNVVIFTPHGYFAQDNVLGYPDTGGQVVYILDQVRALENEMLLRIKQQGLDITPRILIITRLLPDAVGTTCGQRVEKVYG 334 (784)
Q Consensus 255 mkI~ivs~h~~~~~~~~lg~p~tGG~~vyv~d~~raLe~eLa~~L~~~GheV~~~i~VvTr~~~~~~g~~~~~~~e~v~~ 334 (784)
|||+|++. .+||.+.... +|+++|.++||+|+ ++|..... . ....+
T Consensus 2 ~~i~i~~~-------------g~gG~~~~~~--------~la~~L~~~g~ev~----vv~~~~~~-~----~~~~~---- 47 (357)
T PRK00726 2 KKILLAGG-------------GTGGHVFPAL--------ALAEELKKRGWEVL----YLGTARGM-E----ARLVP---- 47 (357)
T ss_pred cEEEEEcC-------------cchHhhhHHH--------HHHHHHHhCCCEEE----EEECCCch-h----hhccc----
Confidence 89888852 1367777666 66777899999999 88864211 0 01111
Q ss_pred cCCeEEEEccCCCCccccccccccc-CChhhHHHHHHHHHHHHHHHcCCCceEEEEcCCChhHHHHHHHHhCCCcEEEEe
Q 003947 335 TKYSDILRVPFRTEEGIVRKWISRF-EVWPYLETFTEDVATEIIQELQCKPDLIIGNYSDGNIVASLLAHKLDVTQCTIA 413 (784)
Q Consensus 335 ~~~v~IlrvP~~~~~~~~~~~isr~-~l~~yl~~f~~~~~~~i~~~~~~~pDIIh~~~~~~~lva~llar~~gvp~V~t~ 413 (784)
..++++++++.....+-. ..++. ..+.++.. ...+.+.+. ..+|||||+|.+.+++.+.++++..++|+|++.
T Consensus 48 ~~g~~~~~~~~~~~~~~~--~~~~l~~~~~~~~~-~~~~~~~ik---~~~pDvv~~~~~~~~~~~~~~~~~~~~p~v~~~ 121 (357)
T PRK00726 48 KAGIEFHFIPSGGLRRKG--SLANLKAPFKLLKG-VLQARKILK---RFKPDVVVGFGGYVSGPGGLAARLLGIPLVIHE 121 (357)
T ss_pred cCCCcEEEEeccCcCCCC--hHHHHHHHHHHHHH-HHHHHHHHH---hcCCCEEEECCCcchhHHHHHHHHcCCCEEEEc
Confidence 135777887764321100 00000 01111111 111222222 458999999998777888888888999999876
Q ss_pred cCCcccCCCCCcchhhhccccccccchhhhhHHHhcccCEEEecChHhHhhccccccccccccccccccceeeecCCCCC
Q 003947 414 HALELTKYPDSDINWKKLDDKYHFSCQFTADLFAMNRTDFIITSTFQEIAGSKDTVGQYESHTAFSLPGLYRVVNGIDAF 493 (784)
Q Consensus 414 H~l~~~k~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~~~~~~~~~~vgqYe~~~~f~~p~l~~~~~gi~~f 493 (784)
|+... . ..+++.++.+|.+++++++... . .+
T Consensus 122 ~~~~~-----------~-----------~~~r~~~~~~d~ii~~~~~~~~---------------------~----~~-- 152 (357)
T PRK00726 122 QNAVP-----------G-----------LANKLLARFAKKVATAFPGAFP---------------------E----FF-- 152 (357)
T ss_pred CCCCc-----------c-----------HHHHHHHHHhchheECchhhhh---------------------c----cC--
Confidence 64311 0 1134467789999998864321 0 12
Q ss_pred CCceEEecCCCCCCCCCCCcHHHHhhhcchhhhHHhhcCchhhhhhhccccCCCCCEEEEEecccCCCChHHHH-HHHHH
Q 003947 494 DPKFNIVSPGADMTIYFPYMEEKRRLKHFHSEIEELLYSPVENKEHLCVLKDSSKPILFTMARLDRVKNLTGLV-EWYGK 572 (784)
Q Consensus 494 ~~k~~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~~gll~~~~k~iIl~vGRL~~~Kgi~~Li-eA~~~ 572 (784)
..++.+++||+|.+.+.+.... +++++ +++.++|+++|+....|++..++ +|+.+
T Consensus 153 ~~~i~vi~n~v~~~~~~~~~~~----------------------~~~~~--~~~~~~i~~~gg~~~~~~~~~~l~~a~~~ 208 (357)
T PRK00726 153 KPKAVVTGNPVREEILALAAPP----------------------ARLAG--REGKPTLLVVGGSQGARVLNEAVPEALAL 208 (357)
T ss_pred CCCEEEECCCCChHhhcccchh----------------------hhccC--CCCCeEEEEECCcHhHHHHHHHHHHHHHH
Confidence 6799999999998765542211 12333 45678889999988888876555 89888
Q ss_pred hHccCCCeEEEEEeCCCCCCcccHHHHHHHHHHHHHHHhcCCCCcEEEccCcCCcCChhHHHHHHHccccEEEeCCCCCC
Q 003947 573 NAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYGLIDTYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEA 652 (784)
Q Consensus 573 l~~~~~~v~LvIVG~g~~~~s~d~ee~~~~~~l~~li~~l~L~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~ 652 (784)
+.+. + ..++++|++.. +.+.+..+ +++. |.+.|++ +++..+++. +|++|.++-
T Consensus 209 ~~~~-~-~~~~~~G~g~~------------~~~~~~~~-~~~~--v~~~g~~------~~~~~~~~~-~d~~i~~~g--- 261 (357)
T PRK00726 209 LPEA-L-QVIHQTGKGDL------------EEVRAAYA-AGIN--AEVVPFI------DDMAAAYAA-ADLVICRAG--- 261 (357)
T ss_pred hhhC-c-EEEEEcCCCcH------------HHHHHHhh-cCCc--EEEeehH------hhHHHHHHh-CCEEEECCC---
Confidence 8653 3 56778898842 33444445 6664 9999954 468888885 999998762
Q ss_pred CcHHHHHHHHcCCcEEEcCccc--------cccccccCceEEEECCCC--HHHHHHHHHHHHHHhcCCHHHHHHHHHHHH
Q 003947 653 FGLTVVEAMTCGLPTFATCNGG--------PAEIIVHGKSGFHIDPYK--GDQATGILVDFFEKCKVDPGHWDEISQGGL 722 (784)
Q Consensus 653 fGltvlEAMA~GlPVIaT~~GG--------~~EiI~dg~~G~li~p~d--~e~lAe~I~~~l~~ll~dp~~~~~m~~~a~ 722 (784)
+.+++|||+||+|+|++..++ ..+.+.+..+|++++++| +++++++|. ++++|++.+++|+++++
T Consensus 262 -~~~~~Ea~~~g~Pvv~~~~~~~~~~~~~~~~~~i~~~~~g~~~~~~~~~~~~l~~~i~----~ll~~~~~~~~~~~~~~ 336 (357)
T PRK00726 262 -ASTVAELAAAGLPAILVPLPHAADDHQTANARALVDAGAALLIPQSDLTPEKLAEKLL----ELLSDPERLEAMAEAAR 336 (357)
T ss_pred -HHHHHHHHHhCCCEEEecCCCCCcCcHHHHHHHHHHCCCEEEEEcccCCHHHHHHHHH----HHHcCHHHHHHHHHHHH
Confidence 689999999999999987653 235677777999999888 899999987 55689999999999999
Q ss_pred HHHHHhCCHHHHHHHHHHHHH
Q 003947 723 KRIQEKYTWKIYSERLLNLSG 743 (784)
Q Consensus 723 ~~v~~~ytw~~~a~~ll~ly~ 743 (784)
++. +.++-+.+++.++++.+
T Consensus 337 ~~~-~~~~~~~~~~~~~~~~~ 356 (357)
T PRK00726 337 ALG-KPDAAERLADLIEELAR 356 (357)
T ss_pred hcC-CcCHHHHHHHHHHHHhh
Confidence 986 89999999999988754
No 70
>cd03788 GT1_TPS Trehalose-6-Phosphate Synthase (TPS) is a glycosyltransferase that catalyses the synthesis of alpha,alpha-1,1-trehalose-6-phosphate from glucose-6-phosphate using a UDP-glucose donor. It is a key enzyme in the trehalose synthesis pathway. Trehalose is a nonreducing disaccharide present in a wide variety of organisms and may serve as a source of energy and carbon. It is characterized most notably in insect, plant, and microbial cells. Its production is often associated with a variety of stress conditions, including desiccation, dehydration, heat, cold, and oxidation. This family represents the catalytic domain of the TPS. Some members of this domain family coexist with a C-terminal trehalose phosphatase domain.
Probab=99.94 E-value=1e-25 Score=257.80 Aligned_cols=324 Identities=14% Similarity=0.071 Sum_probs=217.4
Q ss_pred HHHHHHHHHHcCCCceEEEEcCCChhHHHHHHHHh-CCCcEEEEecCCcccCCCCCcchhhhccccccccchhhhhHHHh
Q 003947 370 EDVATEIIQELQCKPDLIIGNYSDGNIVASLLAHK-LDVTQCTIAHALELTKYPDSDINWKKLDDKYHFSCQFTADLFAM 448 (784)
Q Consensus 370 ~~~~~~i~~~~~~~pDIIh~~~~~~~lva~llar~-~gvp~V~t~H~l~~~k~~~s~~~~~~~~~~y~~~~~~~~e~~a~ 448 (784)
...+..+... -...|+|+.|++...+++.++.++ .+.|+++..|..++ .+.. |..+ .....-...+
T Consensus 119 ~~fa~~i~~~-~~~~d~iwihDyhl~llp~~lr~~~~~~~i~~f~HipfP----~~e~-~~~l-------p~~~~ll~~~ 185 (460)
T cd03788 119 RKFADAIAEV-LRPGDLVWVHDYHLLLLPQMLRERGPDARIGFFLHIPFP----SSEI-FRCL-------PWREELLRGL 185 (460)
T ss_pred HHHHHHHHHh-cCCCCEEEEeChhhhHHHHHHHhhCCCCeEEEEEeCCCC----ChHH-HhhC-------CChHHHHHHH
Confidence 3344444443 235799999999887777777654 35889999997542 2221 1111 1111112357
Q ss_pred cccCEEEecChHhHhhccccccccccccccccccceeeecCCCCCCCceEEecCCCCCCCCCCCcHHHHhhhcchhhhHH
Q 003947 449 NRTDFIITSTFQEIAGSKDTVGQYESHTAFSLPGLYRVVNGIDAFDPKFNIVSPGADMTIYFPYMEEKRRLKHFHSEIEE 528 (784)
Q Consensus 449 ~~AD~IIt~S~~~~~~~~~~vgqYe~~~~f~~p~l~~~~~gi~~f~~k~~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~ 528 (784)
-.+|.|.+.+........+.....-... .+. .......|. ..++.++|||||.+.|.+.........
T Consensus 186 l~~D~igF~t~~~~~~Fl~~~~~~l~~~-~~~-~~~i~~~g~---~~~i~vip~GID~~~f~~~~~~~~~~~-------- 252 (460)
T cd03788 186 LGADLIGFQTERYARNFLSCCSRLLGLE-VTD-DGGVEYGGR---RVRVGAFPIGIDPDAFRKLAASPEVQE-------- 252 (460)
T ss_pred hcCCEEEECCHHHHHHHHHHHHHHcCCc-ccC-CceEEECCE---EEEEEEEeCeEcHHHHHHHhcCchhHH--------
Confidence 7799999998765442222110000000 000 000111111 347899999999988865422111000
Q ss_pred hhcCchhhhhhhccccCCCCCEEEEEecccCCCChHHHHHHHHHhHccCCC----eEEEEEeCCCCCCcccHHHHHHHHH
Q 003947 529 LLYSPVENKEHLCVLKDSSKPILFTMARLDRVKNLTGLVEWYGKNAKLREL----VNLVVVGGDRRKESKDLEEQAEMKK 604 (784)
Q Consensus 529 ~l~~~~~~~~~~gll~~~~k~iIl~vGRL~~~Kgi~~LieA~~~l~~~~~~----v~LvIVG~g~~~~s~d~ee~~~~~~ 604 (784)
..++..+. .+++++|+++||+++.||++.+++|++++.+.+|+ ++|+++|++... ...+.....+.
T Consensus 253 ------~~~~~~~~--~~~~~~il~vgRl~~~Kgi~~ll~A~~~ll~~~p~~~~~v~Lv~vg~~~~g--~~~~~~~l~~~ 322 (460)
T cd03788 253 ------RAAELRER--LGGRKLIVGVDRLDYSKGIPERLLAFERLLERYPEWRGKVVLVQIAVPSRT--DVPEYQELRRE 322 (460)
T ss_pred ------HHHHHHHh--cCCCEEEEEecCccccCCHHHHHHHHHHHHHhChhhcCCEEEEEEccCCCc--CcHHHHHHHHH
Confidence 00111222 45788999999999999999999999998877675 679999865321 12233345556
Q ss_pred HHHHHHhcCCC------CcEEEccCcCCcCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCc----EEEcCccc
Q 003947 605 MYGLIDTYKLN------GQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLP----TFATCNGG 674 (784)
Q Consensus 605 l~~li~~l~L~------~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMA~GlP----VIaT~~GG 674 (784)
+.+++++.+.. ..|.+++ +.++.+++..+|+. +|+||+||..||||++++||||||+| ||+|+.+|
T Consensus 323 l~~~v~~in~~~g~~~~~~v~~~~---g~v~~~el~~~y~~-aDv~v~pS~~Eg~~lv~lEAma~g~p~~g~vV~S~~~G 398 (460)
T cd03788 323 VEELVGRINGKFGTLDWTPVRYLY---RSLPREELAALYRA-ADVALVTPLRDGMNLVAKEYVACQDDDPGVLILSEFAG 398 (460)
T ss_pred HHHHHHHHHhccCCCCceeEEEEe---CCCCHHHHHHHHHh-ccEEEeCccccccCcccceeEEEecCCCceEEEecccc
Confidence 66666654421 2355553 26778999999995 99999999999999999999999999 99999999
Q ss_pred cccccccCceEEEECCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHH
Q 003947 675 PAEIIVHGKSGFHIDPYKGDQATGILVDFFEKCKVDPGHWDEISQGGLKRIQEKYTWKIYSERLLN 740 (784)
Q Consensus 675 ~~EiI~dg~~G~li~p~d~e~lAe~I~~~l~~ll~dp~~~~~m~~~a~~~v~~~ytw~~~a~~ll~ 740 (784)
..+. +.+|++++|.|++++|++|.++++ ++++.++.+++++++++ ++|||+..+++++.
T Consensus 399 ~~~~---~~~g~lv~p~d~~~la~ai~~~l~---~~~~e~~~~~~~~~~~v-~~~~~~~w~~~~l~ 457 (460)
T cd03788 399 AAEE---LSGALLVNPYDIDEVADAIHRALT---MPLEERRERHRKLREYV-RTHDVQAWANSFLD 457 (460)
T ss_pred chhh---cCCCEEECCCCHHHHHHHHHHHHc---CCHHHHHHHHHHHHHHH-HhCCHHHHHHHHHH
Confidence 8887 467999999999999999986542 45688899999999998 78999999999875
No 71
>PHA01633 putative glycosyl transferase group 1
Probab=99.94 E-value=5.4e-25 Score=240.05 Aligned_cols=224 Identities=14% Similarity=0.142 Sum_probs=167.7
Q ss_pred HhcccCEEEecChHhHhhccccccccccccccccccceeeecCCCCCCCceEEecCCCCCCCCCCCcHHHHhhhcchhhh
Q 003947 447 AMNRTDFIITSTFQEIAGSKDTVGQYESHTAFSLPGLYRVVNGIDAFDPKFNIVSPGADMTIYFPYMEEKRRLKHFHSEI 526 (784)
Q Consensus 447 a~~~AD~IIt~S~~~~~~~~~~vgqYe~~~~f~~p~l~~~~~gi~~f~~k~~VIpnGvD~~~f~p~~~~~~rl~~~~~~~ 526 (784)
.|.+.+.+|++|...++...+ .|++ . .+ +|+||+|.+.|.|......++
T Consensus 89 ~m~~~~~vIavS~~t~~~L~~--------------------~G~~--~-~i-~I~~GVD~~~f~p~~~~~~~~------- 137 (335)
T PHA01633 89 YLLQDVKFIPNSKFSAENLQE--------------------VGLQ--V-DL-PVFHGINFKIVENAEKLVPQL------- 137 (335)
T ss_pred HHhcCCEEEeCCHHHHHHHHH--------------------hCCC--C-ce-eeeCCCChhhcCccchhhHHH-------
Confidence 466677899999877763221 2343 2 23 478999999988754221111
Q ss_pred HHhhcCchhhhhhhccccCCCCCEEEEEecccCCCChHHHHHHHHHhHccCCC----eEEEEEeCCCCCCcccHHHHHHH
Q 003947 527 EELLYSPVENKEHLCVLKDSSKPILFTMARLDRVKNLTGLVEWYGKNAKLREL----VNLVVVGGDRRKESKDLEEQAEM 602 (784)
Q Consensus 527 ~~~l~~~~~~~~~~gll~~~~k~iIl~vGRL~~~Kgi~~LieA~~~l~~~~~~----v~LvIVG~g~~~~s~d~ee~~~~ 602 (784)
+++++.. .++.++|+++||+.+.||++.|++|++++.+..++ ++++++|++
T Consensus 138 ----------r~~~~~~-~~~~~~i~~vGRl~~~KG~~~LI~A~~~L~~~~p~~~~~i~l~ivG~~-------------- 192 (335)
T PHA01633 138 ----------KQKLDKD-FPDTIKFGIVSGLTKRKNMDLMLQVFNELNTKYPDIAKKIHFFVISHK-------------- 192 (335)
T ss_pred ----------HHHhCcC-CCCCeEEEEEeCCccccCHHHHHHHHHHHHHhCCCccccEEEEEEcHH--------------
Confidence 1223321 24678899999999999999999999999876654 578887632
Q ss_pred HHHHHHHHhcCCCCcEEEccCcCCcCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcCcccccccccc-
Q 003947 603 KKMYGLIDTYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCNGGPAEIIVH- 681 (784)
Q Consensus 603 ~~l~~li~~l~L~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMA~GlPVIaT~~GG~~EiI~d- 681 (784)
..+++++.++|+|+|... .++.+++.++|+. +|+||+||..|+||++++||||||+|||+|+.||++|++.+
T Consensus 193 -----~~~~l~l~~~V~f~g~~G-~~~~~dl~~~y~~-aDifV~PS~~EgfGlvlLEAMA~G~PVVas~~~~l~Ei~g~~ 265 (335)
T PHA01633 193 -----QFTQLEVPANVHFVAEFG-HNSREYIFAFYGA-MDFTIVPSGTEGFGMPVLESMAMGTPVIHQLMPPLDEFTSWQ 265 (335)
T ss_pred -----HHHHcCCCCcEEEEecCC-CCCHHHHHHHHHh-CCEEEECCccccCCHHHHHHHHcCCCEEEccCCCceeecCCc
Confidence 134567888999996322 5567899999995 99999999999999999999999999999999999997441
Q ss_pred ---------------C--ceEEEECCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHH
Q 003947 682 ---------------G--KSGFHIDPYKGDQATGILVDFFEKCKVDPGHWDEISQGGLKRIQEKYTWKIYSERLL 739 (784)
Q Consensus 682 ---------------g--~~G~li~p~d~e~lAe~I~~~l~~ll~dp~~~~~m~~~a~~~v~~~ytw~~~a~~ll 739 (784)
+ ..||.+++.|++++|++|..+++ ..+++. .+.++++++ ++|+|+.++++++
T Consensus 266 ~~~Li~~~~v~~~~~~~~g~g~~~~~~d~~~la~ai~~~~~--~~~~~~---~~~~~~~~a-~~f~~~~~~~~~~ 334 (335)
T PHA01633 266 WNLLIKSSKVEEYYDKEHGQKWKIHKFQIEDMANAIILAFE--LQDREE---RSMKLKELA-KKYDIRNLYTRFL 334 (335)
T ss_pred cceeeCCCCHHHhcCcccCceeeecCCCHHHHHHHHHHHHh--ccChhh---hhHHHHHHH-HhcCHHHHHHHhh
Confidence 2 25778999999999999987653 234443 366777776 9999999999886
No 72
>cd03785 GT1_MurG MurG is an N-acetylglucosaminyltransferase, the last enzyme involved in the intracellular phase of peptidoglycan biosynthesis. It transfers N-acetyl-D-glucosamine (GlcNAc) from UDP-GlcNAc to the C4 hydroxyl of a lipid-linked N-acetylmuramoyl pentapeptide (NAM). The resulting disaccharide is then transported across the cell membrane, where it is polymerized into NAG-NAM cell-wall repeat structure. MurG belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains, each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=99.94 E-value=1.4e-24 Score=238.44 Aligned_cols=324 Identities=12% Similarity=0.107 Sum_probs=220.7
Q ss_pred CcccchhhhHHHHHHHHHHHHHHHHHcCCCcccceEEEecCCCCCCCCCcCcceeeecCcCCeEEEEccCCCCccccccc
Q 003947 276 DTGGQVVYILDQVRALENEMLLRIKQQGLDITPRILIITRLLPDAVGTTCGQRVEKVYGTKYSDILRVPFRTEEGIVRKW 355 (784)
Q Consensus 276 ~tGG~~vyv~d~~raLe~eLa~~L~~~GheV~~~i~VvTr~~~~~~g~~~~~~~e~v~~~~~v~IlrvP~~~~~~~~~~~ 355 (784)
.+||...++. .|++.|.++||+|+ |+|...... .+ .....++++.++|+....+
T Consensus 8 ~~gG~~~~~~--------~la~~l~~~G~ev~----v~~~~~~~~--------~~-~~~~~~~~~~~~~~~~~~~----- 61 (350)
T cd03785 8 GTGGHIFPAL--------ALAEELRERGAEVL----FLGTKRGLE--------AR-LVPKAGIPLHTIPVGGLRR----- 61 (350)
T ss_pred CchhhhhHHH--------HHHHHHHhCCCEEE----EEECCCcch--------hh-cccccCCceEEEEecCcCC-----
Confidence 4588888777 66777899999999 888653210 01 1112357788887643211
Q ss_pred ccccCChhhHHHH------HHHHHHHHHHHcCCCceEEEEcCCChhHHHHHHHHhCCCcEEEEecCCcccCCCCCcchhh
Q 003947 356 ISRFEVWPYLETF------TEDVATEIIQELQCKPDLIIGNYSDGNIVASLLAHKLDVTQCTIAHALELTKYPDSDINWK 429 (784)
Q Consensus 356 isr~~l~~yl~~f------~~~~~~~i~~~~~~~pDIIh~~~~~~~lva~llar~~gvp~V~t~H~l~~~k~~~s~~~~~ 429 (784)
...+..+..+ ...+.+.+. +.+||+||+|....++.+.++++..++|+++..|+..+
T Consensus 62 ---~~~~~~~~~~~~~~~~~~~~~~~i~---~~~pDvI~~~~~~~~~~~~~~a~~~~~p~v~~~~~~~~----------- 124 (350)
T cd03785 62 ---KGSLKKLKAPFKLLKGVLQARKILK---KFKPDVVVGFGGYVSGPVGLAAKLLGIPLVIHEQNAVP----------- 124 (350)
T ss_pred ---CChHHHHHHHHHHHHHHHHHHHHHH---hcCCCEEEECCCCcchHHHHHHHHhCCCEEEEcCCCCc-----------
Confidence 1111111111 111222222 45899999998777777788889999999875554211
Q ss_pred hccccccccchhhhhHHHhcccCEEEecChHhHhhccccccccccccccccccceeeecCCCCCCCceEEecCCCCCCCC
Q 003947 430 KLDDKYHFSCQFTADLFAMNRTDFIITSTFQEIAGSKDTVGQYESHTAFSLPGLYRVVNGIDAFDPKFNIVSPGADMTIY 509 (784)
Q Consensus 430 ~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~~~~~~~~~~vgqYe~~~~f~~p~l~~~~~gi~~f~~k~~VIpnGvD~~~f 509 (784)
. ..+++.++.+|.|++.|+...+ + +. +.++.+++||+|.+.+
T Consensus 125 ~-----------~~~~~~~~~~~~vi~~s~~~~~--------------------~-----~~--~~~~~~i~n~v~~~~~ 166 (350)
T cd03785 125 G-----------LANRLLARFADRVALSFPETAK--------------------Y-----FP--KDKAVVTGNPVREEIL 166 (350)
T ss_pred c-----------HHHHHHHHhhCEEEEcchhhhh--------------------c-----CC--CCcEEEECCCCchHHh
Confidence 0 0123456779999999987654 0 11 5689999999998766
Q ss_pred CCCcHHHHhhhcchhhhHHhhcCchhhhhhhccccCCCCCEEEEEecccCCCChHH-HHHHHHHhHccCCCeEE-EEEeC
Q 003947 510 FPYMEEKRRLKHFHSEIEELLYSPVENKEHLCVLKDSSKPILFTMARLDRVKNLTG-LVEWYGKNAKLRELVNL-VVVGG 587 (784)
Q Consensus 510 ~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~~gll~~~~k~iIl~vGRL~~~Kgi~~-LieA~~~l~~~~~~v~L-vIVG~ 587 (784)
.+... ++.+++ ++++++|+++|+....|+... +++++..+.+ +++.+ +++|.
T Consensus 167 ~~~~~----------------------~~~~~~--~~~~~~i~~~~g~~~~~~~~~~l~~a~~~l~~--~~~~~~~i~G~ 220 (350)
T cd03785 167 ALDRE----------------------RARLGL--RPGKPTLLVFGGSQGARAINEAVPEALAELLR--KRLQVIHQTGK 220 (350)
T ss_pred hhhhh----------------------HHhcCC--CCCCeEEEEECCcHhHHHHHHHHHHHHHHhhc--cCeEEEEEcCC
Confidence 54321 123454 567788888887766777654 5588888763 45664 46676
Q ss_pred CCCCCcccHHHHHHHHHHHHHHHhcCCCCcEEEccCcCCcCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcE
Q 003947 588 DRRKESKDLEEQAEMKKMYGLIDTYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPT 667 (784)
Q Consensus 588 g~~~~s~d~ee~~~~~~l~~li~~l~L~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMA~GlPV 667 (784)
+ . .+++.+.++++ .++|.+.|++ +++..+|+. +|++|.++- +++++|||+||+|+
T Consensus 221 g-~-----------~~~l~~~~~~~--~~~v~~~g~~------~~~~~~l~~-ad~~v~~sg----~~t~~Eam~~G~Pv 275 (350)
T cd03785 221 G-D-----------LEEVKKAYEEL--GVNYEVFPFI------DDMAAAYAA-ADLVISRAG----ASTVAELAALGLPA 275 (350)
T ss_pred c-c-----------HHHHHHHHhcc--CCCeEEeehh------hhHHHHHHh-cCEEEECCC----HhHHHHHHHhCCCE
Confidence 6 2 24455666665 4789999943 478888885 999998762 68999999999999
Q ss_pred EEcCccc--------cccccccCceEEEECCC--CHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHH
Q 003947 668 FATCNGG--------PAEIIVHGKSGFHIDPY--KGDQATGILVDFFEKCKVDPGHWDEISQGGLKRIQEKYTWKIYSE 736 (784)
Q Consensus 668 IaT~~GG--------~~EiI~dg~~G~li~p~--d~e~lAe~I~~~l~~ll~dp~~~~~m~~~a~~~v~~~ytw~~~a~ 736 (784)
|+++.++ ..+.+.++.+|++++++ |+++++++|.+ +++|++.+++|++++++++ +.+.-+++++
T Consensus 276 v~~~~~~~~~~~~~~~~~~l~~~g~g~~v~~~~~~~~~l~~~i~~----ll~~~~~~~~~~~~~~~~~-~~~~~~~i~~ 349 (350)
T cd03785 276 ILIPLPYAADDHQTANARALVKAGAAVLIPQEELTPERLAAALLE----LLSDPERLKAMAEAARSLA-RPDAAERIAD 349 (350)
T ss_pred EEeecCCCCCCcHHHhHHHHHhCCCEEEEecCCCCHHHHHHHHHH----HhcCHHHHHHHHHHHHhcC-CCCHHHHHHh
Confidence 9987654 24667777799999987 89999999975 4479999999999999887 5676666553
No 73
>TIGR01133 murG undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase. RL J Bacteriol 1993 Mar;175(6):1841-3
Probab=99.93 E-value=2.4e-24 Score=236.27 Aligned_cols=315 Identities=14% Similarity=0.108 Sum_probs=206.0
Q ss_pred HHHHHHHHcCCCcccceEEEecCCCCCCCCCcCcceeeecCcCCeEEEEccCCCCcccccccccccCChhhHH---HHHH
Q 003947 294 EMLLRIKQQGLDITPRILIITRLLPDAVGTTCGQRVEKVYGTKYSDILRVPFRTEEGIVRKWISRFEVWPYLE---TFTE 370 (784)
Q Consensus 294 eLa~~L~~~GheV~~~i~VvTr~~~~~~g~~~~~~~e~v~~~~~v~IlrvP~~~~~~~~~~~isr~~l~~yl~---~f~~ 370 (784)
.|+++|.++||+|+ ++|+..... ... ....++++.+++.....+ .+......... ....
T Consensus 19 ~La~~L~~~g~eV~----vv~~~~~~~------~~~---~~~~g~~~~~i~~~~~~~-----~~~~~~l~~~~~~~~~~~ 80 (348)
T TIGR01133 19 AVAEELIKRGVEVL----WLGTKRGLE------KRL---VPKAGIEFYFIPVGGLRR-----KGSFRLIKTPLKLLKAVF 80 (348)
T ss_pred HHHHHHHhCCCEEE----EEeCCCcch------hcc---cccCCCceEEEeccCcCC-----CChHHHHHHHHHHHHHHH
Confidence 57788899999999 888532110 010 111357777777643211 00001111111 1111
Q ss_pred HHHHHHHHHcCCCceEEEEcCCChhHHHHHHHHhCCCcEEEEecCCcccCCCCCcchhhhccccccccchhhhhHHHhcc
Q 003947 371 DVATEIIQELQCKPDLIIGNYSDGNIVASLLAHKLDVTQCTIAHALELTKYPDSDINWKKLDDKYHFSCQFTADLFAMNR 450 (784)
Q Consensus 371 ~~~~~i~~~~~~~pDIIh~~~~~~~lva~llar~~gvp~V~t~H~l~~~k~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~ 450 (784)
.+.+.+. +.+||+||+|....++.+.++++..++|+|...|+... . ..+++..+.
T Consensus 81 ~l~~~i~---~~~pDvVi~~~~~~~~~~~~~~~~~~~p~v~~~~~~~~-----------------~-----~~~~~~~~~ 135 (348)
T TIGR01133 81 QARRILK---KFKPDAVIGFGGYVSGPAGLAAKLLGIPLFHHEQNAVP-----------------G-----LTNKLLSRF 135 (348)
T ss_pred HHHHHHH---hcCCCEEEEcCCcccHHHHHHHHHcCCCEEEECCCCCc-----------------c-----HHHHHHHHH
Confidence 2222222 45899999998777777788888899998754332110 0 013456778
Q ss_pred cCEEEecChHhHhhccccccccccccccccccceeeecCCCCCCCceEEecCCCCCCCCCCCcHHHHhhhcchhhhHHhh
Q 003947 451 TDFIITSTFQEIAGSKDTVGQYESHTAFSLPGLYRVVNGIDAFDPKFNIVSPGADMTIYFPYMEEKRRLKHFHSEIEELL 530 (784)
Q Consensus 451 AD~IIt~S~~~~~~~~~~vgqYe~~~~f~~p~l~~~~~gi~~f~~k~~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l 530 (784)
+|.+++.|+.+.+ .-+..+|+||+|...+.+...
T Consensus 136 ~d~ii~~~~~~~~------------------------------~~~~~~i~n~v~~~~~~~~~~---------------- 169 (348)
T TIGR01133 136 AKKVLISFPGAKD------------------------------HFEAVLVGNPVRQEIRSLPVP---------------- 169 (348)
T ss_pred hCeeEECchhHhh------------------------------cCCceEEcCCcCHHHhcccch----------------
Confidence 9999999987654 013378999998765543211
Q ss_pred cCchhhhhhhccccCCCCCEEEEEecccCCCChHH-HHHHHHHhHccCCCeEEEEEeCCCCCCcccHHHHHHHHHHHHHH
Q 003947 531 YSPVENKEHLCVLKDSSKPILFTMARLDRVKNLTG-LVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYGLI 609 (784)
Q Consensus 531 ~~~~~~~~~~gll~~~~k~iIl~vGRL~~~Kgi~~-LieA~~~l~~~~~~v~LvIVG~g~~~~s~d~ee~~~~~~l~~li 609 (784)
++.+++ ++++++|+++|+....|++.. ++++++++.+. ++++++++++.+ .+.+++.+
T Consensus 170 ------~~~~~~--~~~~~~i~~~gg~~~~~~~~~~l~~a~~~l~~~--~~~~~~~~g~~~-----------~~~l~~~~ 228 (348)
T TIGR01133 170 ------RERFGL--REGKPTILVLGGSQGAKILNELVPKALAKLAEK--GIQIVHQTGKND-----------LEKVKNVY 228 (348)
T ss_pred ------hhhcCC--CCCCeEEEEECCchhHHHHHHHHHHHHHHHhhc--CcEEEEECCcch-----------HHHHHHHH
Confidence 012444 567788999998877888654 55888887653 456655444321 24567777
Q ss_pred HhcCCCCcEEEccCcCCcCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcCccc-------cccccccC
Q 003947 610 DTYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCNGG-------PAEIIVHG 682 (784)
Q Consensus 610 ~~l~L~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMA~GlPVIaT~~GG-------~~EiI~dg 682 (784)
+++++.+.+.|.. .++..+|+. +|++|.++ + |++++|||+||+|+|+++.+| ..+++.++
T Consensus 229 ~~~~l~~~v~~~~--------~~~~~~l~~-ad~~v~~~---g-~~~l~Ea~~~g~Pvv~~~~~~~~~~~~~~~~~i~~~ 295 (348)
T TIGR01133 229 QELGIEAIVTFID--------ENMAAAYAA-ADLVISRA---G-ASTVAELAAAGVPAILIPYPYAADDQYYNAKFLEDL 295 (348)
T ss_pred hhCCceEEecCcc--------cCHHHHHHh-CCEEEECC---C-hhHHHHHHHcCCCEEEeeCCCCccchhhHHHHHHHC
Confidence 7787765555542 157788884 99999875 2 789999999999999997754 23578888
Q ss_pred ceEEEECCCC--HHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHH
Q 003947 683 KSGFHIDPYK--GDQATGILVDFFEKCKVDPGHWDEISQGGLKRIQEKYTWKIYSE 736 (784)
Q Consensus 683 ~~G~li~p~d--~e~lAe~I~~~l~~ll~dp~~~~~m~~~a~~~v~~~ytw~~~a~ 736 (784)
.+|++++++| +++++++|. ++++||+.+++|++++++++ +...-+++++
T Consensus 296 ~~G~~~~~~~~~~~~l~~~i~----~ll~~~~~~~~~~~~~~~~~-~~~~~~~i~~ 346 (348)
T TIGR01133 296 GAGLVIRQKELLPEKLLEALL----KLLLDPANLEAMAEAARKLA-KPDAAKRIAE 346 (348)
T ss_pred CCEEEEecccCCHHHHHHHHH----HHHcCHHHHHHHHHHHHhcC-CccHHHHHHh
Confidence 9999999886 999999997 45589999999999998877 5555555443
No 74
>TIGR02400 trehalose_OtsA alpha,alpha-trehalose-phosphate synthase [UDP-forming]. This enzyme catalyzes the key, penultimate step in biosynthesis of trehalose, a compatible solute made as an osmoprotectant in some species in all three domains of life. The gene symbol OtsA stands for osmotically regulated trehalose synthesis A. Trehalose helps protect against both osmotic and thermal stresses, and is made from two glucose subunits. This model excludes glucosylglycerol-phosphate synthase, an enzyme of an analogous osmoprotectant system in many cyanobacterial strains. This model does not identify archaeal examples, as they are more divergent than glucosylglycerol-phosphate synthase. Sequences that score in the gray zone between the trusted and noise cutoffs include a number of yeast multidomain proteins in which the N-terminal domain may be functionally equivalent to this family. The gray zone also includes the OtsA of Cornyebacterium glutamicum (and related species), shown to be responsib
Probab=99.93 E-value=4.8e-24 Score=242.92 Aligned_cols=321 Identities=16% Similarity=0.154 Sum_probs=218.4
Q ss_pred HHHHHHHHHHHHcCCCceEEEEcCCChhHHHHHHHHhC-CCcEEEEecCCcccCCCCCcchhhhccccccccchhhhhHH
Q 003947 368 FTEDVATEIIQELQCKPDLIIGNYSDGNIVASLLAHKL-DVTQCTIAHALELTKYPDSDINWKKLDDKYHFSCQFTADLF 446 (784)
Q Consensus 368 f~~~~~~~i~~~~~~~pDIIh~~~~~~~lva~llar~~-gvp~V~t~H~l~~~k~~~s~~~~~~~~~~y~~~~~~~~e~~ 446 (784)
.....+..+.+.. ..-|+|..|+....+++.++.++. ..++.+..|..+ +.+++. +.......-+.
T Consensus 113 vN~~fA~~i~~~~-~~~d~vwvhDYhl~l~p~~lr~~~~~~~igfFlHipf----P~~e~f--------~~lp~r~~il~ 179 (456)
T TIGR02400 113 VNRLFAEALAPLL-QPGDIVWVHDYHLMLLPAMLRELGVQNKIGFFLHIPF----PSSEIY--------RTLPWRRELLE 179 (456)
T ss_pred HHHHHHHHHHHhC-CCCCEEEEecchhhHHHHHHHhhCCCCeEEEEEeCCC----CChHHH--------hhCCcHHHHHH
Confidence 3334444455443 345899999999888888887764 457778888543 223221 11111122334
Q ss_pred HhcccCEEEecChHhHhhccccccccccccccccccceeeecCCCC--CCCceEEecCCCCCCCCCCCcHHH---Hhhhc
Q 003947 447 AMNRTDFIITSTFQEIAGSKDTVGQYESHTAFSLPGLYRVVNGIDA--FDPKFNIVSPGADMTIYFPYMEEK---RRLKH 521 (784)
Q Consensus 447 a~~~AD~IIt~S~~~~~~~~~~vgqYe~~~~f~~p~l~~~~~gi~~--f~~k~~VIpnGvD~~~f~p~~~~~---~rl~~ 521 (784)
.|-.||.|...|+..+....+.....-. +-....++.. ...++.++|||+|++.|.+..... ++..
T Consensus 180 gll~~dligF~t~~~~~~Fl~~~~~~l~--------~~~~~~~~~~~g~~~~v~viP~GID~~~f~~~~~~~~~~~~~~- 250 (456)
T TIGR02400 180 GLLAYDLVGFQTYDDARNFLSAVSRELG--------LETLPNGVESGGRTVRVGAFPIGIDVDRFAEQAKKPSVQKRIA- 250 (456)
T ss_pred HHhcCCEEEECCHHHHHHHHHHHHHHhC--------CcccCCceEECCcEEEEEEecCcCCHHHHHHHhcChhHHHHHH-
Confidence 7899999999998887644332211000 0000011111 134788999999999987643211 1110
Q ss_pred chhhhHHhhcCchhhhhhhccccCCCCCEEEEEecccCCCChHHHHHHHHHhHccCCC----eEEEEEeCCCCCCcccHH
Q 003947 522 FHSEIEELLYSPVENKEHLCVLKDSSKPILFTMARLDRVKNLTGLVEWYGKNAKLREL----VNLVVVGGDRRKESKDLE 597 (784)
Q Consensus 522 ~~~~~~~~l~~~~~~~~~~gll~~~~k~iIl~vGRL~~~Kgi~~LieA~~~l~~~~~~----v~LvIVG~g~~~~s~d~e 597 (784)
..++++ +++++|+++||+++.||++.+++|++++.+.+|+ +.|+++|+... +...+
T Consensus 251 -------------~lr~~~-----~~~~vIl~VgRLd~~KGi~~ll~A~~~ll~~~p~~~~~v~Lv~v~~p~r--g~~~~ 310 (456)
T TIGR02400 251 -------------ELRESL-----KGRKLIIGVDRLDYSKGLPERLLAFERFLEEHPEWRGKVVLVQIAVPSR--GDVPE 310 (456)
T ss_pred -------------HHHHHc-----CCCeEEEEccccccccCHHHHHHHHHHHHHhCccccCceEEEEEecCCc--cCchH
Confidence 111222 3678999999999999999999999998776665 56888874321 11122
Q ss_pred HHHHHHHHHHHHHhcCC-CCc-----EEEccCcCCcCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCc----E
Q 003947 598 EQAEMKKMYGLIDTYKL-NGQ-----FRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLP----T 667 (784)
Q Consensus 598 e~~~~~~l~~li~~l~L-~~~-----V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMA~GlP----V 667 (784)
+....+.+++++.+.+. .+. +.+++ ..++.+++..+|+ ++|+||+||..||||++++||||||+| +
T Consensus 311 ~~~l~~~i~~lv~~in~~~~~~~~~pv~~l~---~~~~~~el~aly~-aaDv~vv~S~~EG~~Lv~lEamA~g~P~~g~v 386 (456)
T TIGR02400 311 YQQLRRQVEELVGRINGRFGTLDWTPIRYLN---RSYDREELMALYR-AADVGLVTPLRDGMNLVAKEYVAAQDPKDGVL 386 (456)
T ss_pred HHHHHHHHHHHHHHHHhccCCCCCccEEEEc---CCCCHHHHHHHHH-hCcEEEECccccccCccHHHHHHhcCCCCceE
Confidence 33333444444433221 111 44544 2677899999999 499999999999999999999999999 9
Q ss_pred EEcCccccccccccCceEEEECCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHH
Q 003947 668 FATCNGGPAEIIVHGKSGFHIDPYKGDQATGILVDFFEKCKVDPGHWDEISQGGLKRIQEKYTWKIYSERLLNL 741 (784)
Q Consensus 668 IaT~~GG~~EiI~dg~~G~li~p~d~e~lAe~I~~~l~~ll~dp~~~~~m~~~a~~~v~~~ytw~~~a~~ll~l 741 (784)
|+|+.+|..+.+. +|++++|.|++++|++|.+++ ..+++.++++.+++++++ .+||+...++++++-
T Consensus 387 VlS~~~G~~~~l~---~gllVnP~d~~~lA~aI~~aL---~~~~~er~~r~~~~~~~v-~~~~~~~W~~~~l~~ 453 (456)
T TIGR02400 387 ILSEFAGAAQELN---GALLVNPYDIDGMADAIARAL---TMPLEEREERHRAMMDKL-RKNDVQRWREDFLSD 453 (456)
T ss_pred EEeCCCCChHHhC---CcEEECCCCHHHHHHHHHHHH---cCCHHHHHHHHHHHHHHH-hhCCHHHHHHHHHHH
Confidence 9999999888873 799999999999999998655 357888999999999998 679999999998763
No 75
>PRK05749 3-deoxy-D-manno-octulosonic-acid transferase; Reviewed
Probab=99.92 E-value=4.7e-23 Score=233.51 Aligned_cols=285 Identities=13% Similarity=0.085 Sum_probs=191.6
Q ss_pred CCceEEEEcCCChhHHHHHHHHhCCCcEEEEecCCcccCCCCCcchhhhccccccccchhhhhHHHhcccCEEEecChHh
Q 003947 382 CKPDLIIGNYSDGNIVASLLAHKLDVTQCTIAHALELTKYPDSDINWKKLDDKYHFSCQFTADLFAMNRTDFIITSTFQE 461 (784)
Q Consensus 382 ~~pDIIh~~~~~~~lva~llar~~gvp~V~t~H~l~~~k~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~~~ 461 (784)
.+||+||++..+........+++.++|++.+-|.+... +...|+. .. ...+..++.+|.|++.|+..
T Consensus 123 ~~Pd~v~~~~~~~~~~~l~~~~~~~ip~vl~~~~~~~~----s~~~~~~-------~~--~~~r~~~~~~d~ii~~S~~~ 189 (425)
T PRK05749 123 WRPKLVIIMETELWPNLIAELKRRGIPLVLANARLSER----SFKRYQK-------FK--RFYRLLFKNIDLVLAQSEED 189 (425)
T ss_pred hCCCEEEEEecchhHHHHHHHHHCCCCEEEEeccCChh----hHHHHHH-------HH--HHHHHHHHhCCEEEECCHHH
Confidence 48999998755532223345677899998776644211 1111111 11 12335688899999999887
Q ss_pred HhhccccccccccccccccccceeeecCCCCCCCceEEecCCCCCCCCCCCcHHHHhhhcchhhhHHhhcCchhhhhhhc
Q 003947 462 IAGSKDTVGQYESHTAFSLPGLYRVVNGIDAFDPKFNIVSPGADMTIYFPYMEEKRRLKHFHSEIEELLYSPVENKEHLC 541 (784)
Q Consensus 462 ~~~~~~~vgqYe~~~~f~~p~l~~~~~gi~~f~~k~~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~~g 541 (784)
++...+ .|++ .. +.+++|+ +.+.+.+....... ...++.++
T Consensus 190 ~~~l~~--------------------~g~~--~~-i~vi~n~-~~d~~~~~~~~~~~---------------~~~r~~~~ 230 (425)
T PRK05749 190 AERFLA--------------------LGAK--NE-VTVTGNL-KFDIEVPPELAARA---------------ATLRRQLA 230 (425)
T ss_pred HHHHHH--------------------cCCC--CC-cEecccc-cccCCCChhhHHHH---------------HHHHHHhc
Confidence 762211 2433 44 7788884 33333222111110 01122333
Q ss_pred cccCCCCCEEEEEecccCCCChHHHHHHHHHhHccCCCeEEEEEeCCCCCCcccHHHHHHHHHHHHHHHhcCCCCcEEEc
Q 003947 542 VLKDSSKPILFTMARLDRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYGLIDTYKLNGQFRWI 621 (784)
Q Consensus 542 ll~~~~k~iIl~vGRL~~~Kgi~~LieA~~~l~~~~~~v~LvIVG~g~~~~s~d~ee~~~~~~l~~li~~l~L~~~V~fl 621 (784)
+++++++++|+. .|+.+.+++|+.++.+..++++|+|+|+|+. ..++++++++++|+. .+.|.
T Consensus 231 ----~~~~vil~~~~~--~~~~~~ll~A~~~l~~~~~~~~liivG~g~~----------r~~~l~~~~~~~gl~-~~~~~ 293 (425)
T PRK05749 231 ----PNRPVWIAASTH--EGEEELVLDAHRALLKQFPNLLLILVPRHPE----------RFKEVEELLKKAGLS-YVRRS 293 (425)
T ss_pred ----CCCcEEEEeCCC--chHHHHHHHHHHHHHHhCCCcEEEEcCCChh----------hHHHHHHHHHhCCCc-EEEcc
Confidence 356788888864 6889999999999887789999999999853 125678888888885 35555
Q ss_pred cCcCCc--------CChhHHHHHHHccccEEEe-CCCCCCCcHHHHHHHHcCCcEEEcCc-cccccccccC-ceEEEECC
Q 003947 622 SSQMNR--------VRNGELYRYICDTKGAFVQ-PALYEAFGLTVVEAMTCGLPTFATCN-GGPAEIIVHG-KSGFHIDP 690 (784)
Q Consensus 622 G~~~~~--------v~~~el~~~la~aadvfV~-PS~~E~fGltvlEAMA~GlPVIaT~~-GG~~EiI~dg-~~G~li~p 690 (784)
|..... -..+++..+|+. +|++++ +|..|++|.+++|||+||+|||+++. ++..|+++.. .+|+++++
T Consensus 294 ~~~~~~~~~~v~l~~~~~el~~~y~~-aDi~~v~~S~~e~~g~~~lEAma~G~PVI~g~~~~~~~e~~~~~~~~g~~~~~ 372 (425)
T PRK05749 294 QGEPPSADTDVLLGDTMGELGLLYAI-ADIAFVGGSLVKRGGHNPLEPAAFGVPVISGPHTFNFKEIFERLLQAGAAIQV 372 (425)
T ss_pred CCCCCCCCCcEEEEecHHHHHHHHHh-CCEEEECCCcCCCCCCCHHHHHHhCCCEEECCCccCHHHHHHHHHHCCCeEEE
Confidence 421100 024689999995 999554 78889999999999999999999854 6667766553 46888889
Q ss_pred CCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Q 003947 691 YKGDQATGILVDFFEKCKVDPGHWDEISQGGLKRIQEKYTWKIYSERLLNLSG 743 (784)
Q Consensus 691 ~d~e~lAe~I~~~l~~ll~dp~~~~~m~~~a~~~v~~~ytw~~~a~~ll~ly~ 743 (784)
+|+++++++|. .+++||+.+++|+++|++++.++ ...++++++++.
T Consensus 373 ~d~~~La~~l~----~ll~~~~~~~~m~~~a~~~~~~~---~~~~~~~~~~l~ 418 (425)
T PRK05749 373 EDAEDLAKAVT----YLLTDPDARQAYGEAGVAFLKQN---QGALQRTLQLLE 418 (425)
T ss_pred CCHHHHHHHHH----HHhcCHHHHHHHHHHHHHHHHhC---ccHHHHHHHHHH
Confidence 99999999997 45589999999999999999665 355566666654
No 76
>PRK13609 diacylglycerol glucosyltransferase; Provisional
Probab=99.91 E-value=8.2e-23 Score=227.95 Aligned_cols=264 Identities=12% Similarity=0.058 Sum_probs=180.6
Q ss_pred CCCceEEEEcCCChhHHHHHHHHhCCCcEEEEecCCcccCCCCCcchhhhccccccccchhhhhHHHhcccCEEEecChH
Q 003947 381 QCKPDLIIGNYSDGNIVASLLAHKLDVTQCTIAHALELTKYPDSDINWKKLDDKYHFSCQFTADLFAMNRTDFIITSTFQ 460 (784)
Q Consensus 381 ~~~pDIIh~~~~~~~lva~llar~~gvp~V~t~H~l~~~k~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~~ 460 (784)
+.+||+||++++..++.....++..++|++++.++..... .+..+.+|.+++.|+.
T Consensus 102 ~~~pD~Vi~~~~~~~~~~~~~~~~~~ip~~~~~td~~~~~------------------------~~~~~~ad~i~~~s~~ 157 (380)
T PRK13609 102 AEKPDIVINTFPIIAVPELKKQTGISIPTYNVLTDFCLHK------------------------IWVHREVDRYFVATDH 157 (380)
T ss_pred HhCcCEEEEcChHHHHHHHHHhcCCCCCeEEEeCCCCCCc------------------------ccccCCCCEEEECCHH
Confidence 3589999998776655444444556799886665432110 1246789999999987
Q ss_pred hHhhccccccccccccccccccceeeecCCCCCCCceEEecCCCCCCCCCCCcHHHHhhhcchhhhHHhhcCchhhhhhh
Q 003947 461 EIAGSKDTVGQYESHTAFSLPGLYRVVNGIDAFDPKFNIVSPGADMTIYFPYMEEKRRLKHFHSEIEELLYSPVENKEHL 540 (784)
Q Consensus 461 ~~~~~~~~vgqYe~~~~f~~p~l~~~~~gi~~f~~k~~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~~ 540 (784)
..+... ..|++ ..|+.++++.++.....+.... ..++++
T Consensus 158 ~~~~l~--------------------~~gi~--~~ki~v~G~p~~~~f~~~~~~~-------------------~~~~~~ 196 (380)
T PRK13609 158 VKKVLV--------------------DIGVP--PEQVVETGIPIRSSFELKINPD-------------------IIYNKY 196 (380)
T ss_pred HHHHHH--------------------HcCCC--hhHEEEECcccChHHcCcCCHH-------------------HHHHHc
Confidence 765211 12444 6688887666543221111111 123456
Q ss_pred ccccCCCCC-EEEEEecccCCCChHHHHHHHHHhHccCCCeEEEEEeCCCCCCcccHHHHHHHHHHHHHHHhcCCCCcEE
Q 003947 541 CVLKDSSKP-ILFTMARLDRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYGLIDTYKLNGQFR 619 (784)
Q Consensus 541 gll~~~~k~-iIl~vGRL~~~Kgi~~LieA~~~l~~~~~~v~LvIVG~g~~~~s~d~ee~~~~~~l~~li~~l~L~~~V~ 619 (784)
|+ +++++ ++++.|++...||+..+++++.+. ++++++++||+.. ...+++++++++++ ++|+
T Consensus 197 ~l--~~~~~~il~~~G~~~~~k~~~~li~~l~~~----~~~~~viv~G~~~---------~~~~~l~~~~~~~~--~~v~ 259 (380)
T PRK13609 197 QL--CPNKKILLIMAGAHGVLGNVKELCQSLMSV----PDLQVVVVCGKNE---------ALKQSLEDLQETNP--DALK 259 (380)
T ss_pred CC--CCCCcEEEEEcCCCCCCcCHHHHHHHHhhC----CCcEEEEEeCCCH---------HHHHHHHHHHhcCC--CcEE
Confidence 66 45555 455668888889999999987542 6789998876421 22355666666655 6899
Q ss_pred EccCcCCcCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcC-ccccc----cccccCceEEEECCCCHH
Q 003947 620 WISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATC-NGGPA----EIIVHGKSGFHIDPYKGD 694 (784)
Q Consensus 620 flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMA~GlPVIaT~-~GG~~----EiI~dg~~G~li~p~d~e 694 (784)
|+|+.. ++..+++. +|++|. ++.|++++|||+||+|+|+++ .+|.. +++.+ +|+.+.+.|++
T Consensus 260 ~~g~~~------~~~~l~~~-aD~~v~----~~gg~t~~EA~a~g~PvI~~~~~~g~~~~n~~~~~~--~G~~~~~~~~~ 326 (380)
T PRK13609 260 VFGYVE------NIDELFRV-TSCMIT----KPGGITLSEAAALGVPVILYKPVPGQEKENAMYFER--KGAAVVIRDDE 326 (380)
T ss_pred EEechh------hHHHHHHh-ccEEEe----CCCchHHHHHHHhCCCEEECCCCCCcchHHHHHHHh--CCcEEEECCHH
Confidence 999543 47788884 999885 566999999999999999985 55531 23332 34445567999
Q ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Q 003947 695 QATGILVDFFEKCKVDPGHWDEISQGGLKRIQEKYTWKIYSERLLNLSGV 744 (784)
Q Consensus 695 ~lAe~I~~~l~~ll~dp~~~~~m~~~a~~~v~~~ytw~~~a~~ll~ly~~ 744 (784)
+++++|. ++++||+.+++|++++++.. +.++++.+++.+++++..
T Consensus 327 ~l~~~i~----~ll~~~~~~~~m~~~~~~~~-~~~s~~~i~~~i~~~~~~ 371 (380)
T PRK13609 327 EVFAKTE----ALLQDDMKLLQMKEAMKSLY-LPEPADHIVDDILAENHV 371 (380)
T ss_pred HHHHHHH----HHHCCHHHHHHHHHHHHHhC-CCchHHHHHHHHHHhhhh
Confidence 9999887 45589999999999998865 778999999999988653
No 77
>PLN03063 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=99.90 E-value=5.9e-22 Score=238.86 Aligned_cols=327 Identities=12% Similarity=0.110 Sum_probs=218.0
Q ss_pred HHHHHHHHHHHHHcCCCceEEEEcCCChhHHHHHHHHh-CCCcEEEEecCCcccCCCCCcchhhhccccccccchhhhhH
Q 003947 367 TFTEDVATEIIQELQCKPDLIIGNYSDGNIVASLLAHK-LDVTQCTIAHALELTKYPDSDINWKKLDDKYHFSCQFTADL 445 (784)
Q Consensus 367 ~f~~~~~~~i~~~~~~~pDIIh~~~~~~~lva~llar~-~gvp~V~t~H~l~~~k~~~s~~~~~~~~~~y~~~~~~~~e~ 445 (784)
...+..+..+.+... .-|+|..|.....+++..+.++ .+.++.+..|..++ .+++. +.+.+...-+
T Consensus 132 ~vN~~FA~~i~~~~~-~~d~vWvhDYhL~llp~~lR~~~~~~~igfFlHiPFP----s~e~f--------r~lp~r~~il 198 (797)
T PLN03063 132 KANRMFLDVVKENYE-EGDVVWCHDYHLMFLPQYLKEYNNKMKVGWFLHTPFP----SSEIY--------KTLPSRSELL 198 (797)
T ss_pred HHHHHHHHHHHHhcC-CCCEEEEecchhhhHHHHHHHhCCCCcEEEEecCCCC----CHHHH--------hhCCCHHHHH
Confidence 334444445555432 3489999999988888888765 45788888887543 23221 1111112234
Q ss_pred HHhcccCEEEecChHhHhhccccccccccccccccccceeeecCCCCCCCceEEecCCCCCCCCCCCcHH---HHhhhcc
Q 003947 446 FAMNRTDFIITSTFQEIAGSKDTVGQYESHTAFSLPGLYRVVNGIDAFDPKFNIVSPGADMTIYFPYMEE---KRRLKHF 522 (784)
Q Consensus 446 ~a~~~AD~IIt~S~~~~~~~~~~vgqYe~~~~f~~p~l~~~~~gi~~f~~k~~VIpnGvD~~~f~p~~~~---~~rl~~~ 522 (784)
..|-.||.|-+.|+..+....+.....-.. ..+..++ ...| ...++.++|||||.+.|.+.... ..+...
T Consensus 199 ~gll~aDligF~t~~y~r~Fl~~~~r~l~~-~~~~~~i--~~~g---r~~~I~viP~GID~~~f~~~~~~~~~~~~~~~- 271 (797)
T PLN03063 199 RAVLTADLIGFHTYDFARHFLSACTRILGV-EGTHEGV--VDQG---KVTRVAVFPIGIDPERFINTCELPEVKQHMKE- 271 (797)
T ss_pred HHHhcCCEEEeCCHHHHHHHHHHHHHHhCc-cccCCce--EECC---eEEEEEEEecccCHHHHHHHhcChhHHHHHHH-
Confidence 578899999999987765333211100000 0000000 0111 13478899999999887653211 111100
Q ss_pred hhhhHHhhcCchhhhhhhccccCCCCCEEEEEecccCCCChHHHHHHHHHhHccCCCe----EEEEEeCCCCCCcccHHH
Q 003947 523 HSEIEELLYSPVENKEHLCVLKDSSKPILFTMARLDRVKNLTGLVEWYGKNAKLRELV----NLVVVGGDRRKESKDLEE 598 (784)
Q Consensus 523 ~~~~~~~l~~~~~~~~~~gll~~~~k~iIl~vGRL~~~Kgi~~LieA~~~l~~~~~~v----~LvIVG~g~~~~s~d~ee 598 (784)
.++. ..++++|+++||+++.||++.+++|++++.+.+|++ .|+.+++... +..+++
T Consensus 272 -------------lr~~-----~~~~~lIl~VgRLd~~KGi~~lL~Afe~lL~~~P~~~~kvvLvqia~psr--~~~~~y 331 (797)
T PLN03063 272 -------------LKRF-----FAGRKVILGVDRLDMIKGIPQKYLAFEKFLEENPEWRDKVMLVQIAVPTR--NDVPEY 331 (797)
T ss_pred -------------HHHh-----cCCCeEEEEecccccccCHHHHHHHHHHHHHhCccccCcEEEEEEecCCC--CchHHH
Confidence 0111 236789999999999999999999999988777765 3554443211 111222
Q ss_pred HHHHHHHHHHHHhcC--CC---CcEEEccC--cCCcCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCc----E
Q 003947 599 QAEMKKMYGLIDTYK--LN---GQFRWISS--QMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLP----T 667 (784)
Q Consensus 599 ~~~~~~l~~li~~l~--L~---~~V~flG~--~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMA~GlP----V 667 (784)
+++++.++++. +. +.+.|.|. ....++.+++..+|+ ++|+||+||..||||++++||||||+| +
T Consensus 332 ----~~l~~~v~~l~g~In~~~g~~~~~pv~~l~~~v~~~el~aly~-~ADvfvvtSlrEGmnLv~lEamA~g~p~~gvl 406 (797)
T PLN03063 332 ----QKLKSQVHELVGRINGRFGSVSSVPIHHLDCSVDFNYLCALYA-ITDVMLVTSLRDGMNLVSYEFVACQKAKKGVL 406 (797)
T ss_pred ----HHHHHHHHHHHHHhhcccccCCCceeEEecCCCCHHHHHHHHH-hCCEEEeCccccccCcchhhHheeecCCCCCE
Confidence 33444444432 22 22333331 113678899999999 499999999999999999999999999 9
Q ss_pred EEcCccccccccccCceEEEECCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Q 003947 668 FATCNGGPAEIIVHGKSGFHIDPYKGDQATGILVDFFEKCKVDPGHWDEISQGGLKRIQEKYTWKIYSERLLNLSGV 744 (784)
Q Consensus 668 IaT~~GG~~EiI~dg~~G~li~p~d~e~lAe~I~~~l~~ll~dp~~~~~m~~~a~~~v~~~ytw~~~a~~ll~ly~~ 744 (784)
|+|.++|.++.+ +.+|++++|.|++++|++|.++++ .+++.+++..++.++++ .++||...++.+++-+..
T Consensus 407 VlSe~~G~~~~l--~~~allVnP~D~~~lA~AI~~aL~---m~~~er~~r~~~~~~~v-~~~~~~~Wa~~fl~~l~~ 477 (797)
T PLN03063 407 VLSEFAGAGQSL--GAGALLVNPWNITEVSSAIKEALN---MSDEERETRHRHNFQYV-KTHSAQKWADDFMSELND 477 (797)
T ss_pred EeeCCcCchhhh--cCCeEEECCCCHHHHHHHHHHHHh---CCHHHHHHHHHHHHHhh-hhCCHHHHHHHHHHHHHH
Confidence 999999999986 557999999999999999986652 48888999899999998 999999999999887754
No 78
>PF00534 Glycos_transf_1: Glycosyl transferases group 1; InterPro: IPR001296 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Proteins containign this domain transfer UDP, ADP, GDP or CMP linked sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides. The bacterial enzymes are involved in various biosynthetic processes that include exopolysaccharide biosynthesis, lipopolysaccharide core biosynthesis and the biosynthesis of the slime polysaccaride colanic acid. Mutations in this domain of the human N-acetylglucosaminyl-phosphatidylinositol biosynthetic protein are the cause of paroxysmal nocturnal hemoglobinuria (PNH), an acquired hemolytic blood disorder characterised by venous thrombosis, erythrocyte hemolysis, infections and defective hematopoiesis.; GO: 0009058 biosynthetic process; PDB: 2L7C_A 2IV3_B 2IUY_B 2XA9_A 2XA1_B 2X6R_A 2XMP_B 2XA2_B 2X6Q_A 3QHP_B ....
Probab=99.90 E-value=5.5e-23 Score=202.91 Aligned_cols=160 Identities=29% Similarity=0.470 Sum_probs=142.5
Q ss_pred CCCCCEEEEEecccCCCChHHHHHHHHHhHcc-CCCeEEEEEeCCCCCCcccHHHHHHHHHHHHHHHhcCCCCcEEEccC
Q 003947 545 DSSKPILFTMARLDRVKNLTGLVEWYGKNAKL-RELVNLVVVGGDRRKESKDLEEQAEMKKMYGLIDTYKLNGQFRWISS 623 (784)
Q Consensus 545 ~~~k~iIl~vGRL~~~Kgi~~LieA~~~l~~~-~~~v~LvIVG~g~~~~s~d~ee~~~~~~l~~li~~l~L~~~V~flG~ 623 (784)
+.++++|+++||+++.||++.+++++..+.+. .+++.|+|+|.+. ....+...++.+++.++|.|+|
T Consensus 12 ~~~~~~il~~g~~~~~K~~~~li~a~~~l~~~~~~~~~l~i~G~~~-----------~~~~~~~~~~~~~~~~~i~~~~- 79 (172)
T PF00534_consen 12 PDKKKIILFIGRLDPEKGIDLLIEAFKKLKEKKNPNYKLVIVGDGE-----------YKKELKNLIEKLNLKENIIFLG- 79 (172)
T ss_dssp -TTSEEEEEESESSGGGTHHHHHHHHHHHHHHHHTTEEEEEESHCC-----------HHHHHHHHHHHTTCGTTEEEEE-
T ss_pred CCCCeEEEEEecCccccCHHHHHHHHHHHHhhcCCCeEEEEEcccc-----------cccccccccccccccccccccc-
Confidence 57889999999999999999999999999764 7899999999653 2466888899999999999999
Q ss_pred cCCcCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHHHHHHHHHHH
Q 003947 624 QMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCNGGPAEIIVHGKSGFHIDPYKGDQATGILVDF 703 (784)
Q Consensus 624 ~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMA~GlPVIaT~~GG~~EiI~dg~~G~li~p~d~e~lAe~I~~~ 703 (784)
.++.+++..++.. +|++|+||..|+||++++|||+||+|||+|+.|+..|++.++.+|+++++.|+++++++|.++
T Consensus 80 ---~~~~~~l~~~~~~-~di~v~~s~~e~~~~~~~Ea~~~g~pvI~~~~~~~~e~~~~~~~g~~~~~~~~~~l~~~i~~~ 155 (172)
T PF00534_consen 80 ---YVPDDELDELYKS-SDIFVSPSRNEGFGLSLLEAMACGCPVIASDIGGNNEIINDGVNGFLFDPNDIEELADAIEKL 155 (172)
T ss_dssp ---SHSHHHHHHHHHH-TSEEEE-BSSBSS-HHHHHHHHTT-EEEEESSTHHHHHSGTTTSEEEESTTSHHHHHHHHHHH
T ss_pred ---ccccccccccccc-ceeccccccccccccccccccccccceeeccccCCceeeccccceEEeCCCCHHHHHHHHHHH
Confidence 6667899999996 999999999999999999999999999999999999999999999999999999999999855
Q ss_pred HHHhcCCHHHHHHHHHHHHHH
Q 003947 704 FEKCKVDPGHWDEISQGGLKR 724 (784)
Q Consensus 704 l~~ll~dp~~~~~m~~~a~~~ 724 (784)
+.+++.++.|+++|++|
T Consensus 156 ----l~~~~~~~~l~~~~~~~ 172 (172)
T PF00534_consen 156 ----LNDPELRQKLGKNARER 172 (172)
T ss_dssp ----HHHHHHHHHHHHHHHHH
T ss_pred ----HCCHHHHHHHHHHhcCC
Confidence 46899999999999986
No 79
>cd04950 GT1_like_1 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center
Probab=99.89 E-value=6.8e-21 Score=212.44 Aligned_cols=266 Identities=12% Similarity=0.067 Sum_probs=176.9
Q ss_pred CCCceEEEEcCCChhHHHHHHHHhCCCcEEEEecCCcccCCCCCcchhhhccccccccchhhhhHHHhcccCEEEecChH
Q 003947 381 QCKPDLIIGNYSDGNIVASLLAHKLDVTQCTIAHALELTKYPDSDINWKKLDDKYHFSCQFTADLFAMNRTDFIITSTFQ 460 (784)
Q Consensus 381 ~~~pDIIh~~~~~~~lva~llar~~gvp~V~t~H~l~~~k~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~~ 460 (784)
+.+.+|++.+.+....+ ++...+.++|+.+++..... .... .. . ...|...++.||.|+|+|+.
T Consensus 100 ~~~~~i~~~~~P~~~~~---~~~~~~~~~Vyd~~D~~~~~-~~~~---~~----~-----~~~e~~~~~~ad~vi~~S~~ 163 (373)
T cd04950 100 GFGRPILWYYTPYTLPV---AALLQASLVVYDCVDDLSAF-PGGP---PE----L-----LEAERRLLKRADLVFTTSPS 163 (373)
T ss_pred CCCCcEEEEeCccHHHH---HhhcCCCeEEEEcccchhcc-CCCC---HH----H-----HHHHHHHHHhCCEEEECCHH
Confidence 55666666665544332 33356788999988854321 1110 00 0 13467789999999999987
Q ss_pred hHhhccccccccccccccccccceeeecCCCCCCCceEEecCCCCCCCCCCCcHHHHhhhcchhhhHHhhcCchhhhhhh
Q 003947 461 EIAGSKDTVGQYESHTAFSLPGLYRVVNGIDAFDPKFNIVSPGADMTIYFPYMEEKRRLKHFHSEIEELLYSPVENKEHL 540 (784)
Q Consensus 461 ~~~~~~~~vgqYe~~~~f~~p~l~~~~~gi~~f~~k~~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~~ 540 (784)
..+..++ ...++.+||||+|.+.|.+........ +.
T Consensus 164 l~~~~~~-------------------------~~~~i~~i~ngvd~~~f~~~~~~~~~~-----------------~~-- 199 (373)
T cd04950 164 LYEAKRR-------------------------LNPNVVLVPNGVDYEHFAAARDPPPPP-----------------AD-- 199 (373)
T ss_pred HHHHHhh-------------------------CCCCEEEcccccCHHHhhcccccCCCh-----------------hH--
Confidence 7652111 136899999999998887643211000 00
Q ss_pred ccccCCCCCEEEEEecccCCCChHHHHHHHHHhHccCCCeEEEEEeCCCCCCcccHHHHHHHHHHHHHHHhcCCCCcEEE
Q 003947 541 CVLKDSSKPILFTMARLDRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYGLIDTYKLNGQFRW 620 (784)
Q Consensus 541 gll~~~~k~iIl~vGRL~~~Kgi~~LieA~~~l~~~~~~v~LvIVG~g~~~~s~d~ee~~~~~~l~~li~~l~L~~~V~f 620 (784)
....++++|+|+|++++.++++.+.+++. ..++++|+++|++... . ... .+...++|.|
T Consensus 200 --~~~~~~~~i~y~G~l~~~~d~~ll~~la~----~~p~~~~vliG~~~~~-----~------~~~----~~~~~~nV~~ 258 (373)
T cd04950 200 --LAALPRPVIGYYGAIAEWLDLELLEALAK----ARPDWSFVLIGPVDVS-----I------DPS----ALLRLPNVHY 258 (373)
T ss_pred --HhcCCCCEEEEEeccccccCHHHHHHHHH----HCCCCEEEEECCCcCc-----c------Chh----HhccCCCEEE
Confidence 01346789999999999888766555443 3578999999998321 0 001 1112478999
Q ss_pred ccCcCCcCChhHHHHHHHccccEEEeCCC-----CCCCcHHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHHH
Q 003947 621 ISSQMNRVRNGELYRYICDTKGAFVQPAL-----YEAFGLTVVEAMTCGLPTFATCNGGPAEIIVHGKSGFHIDPYKGDQ 695 (784)
Q Consensus 621 lG~~~~~v~~~el~~~la~aadvfV~PS~-----~E~fGltvlEAMA~GlPVIaT~~GG~~EiI~dg~~G~li~p~d~e~ 695 (784)
+| .++.+++..+++. +|++++|+. .+++|++++||||||+|||+|+.++.. ..+..+++ .++|+++
T Consensus 259 ~G----~~~~~~l~~~l~~-~Dv~l~P~~~~~~~~~~~P~Kl~EylA~G~PVVat~~~~~~---~~~~~~~~-~~~d~~~ 329 (373)
T cd04950 259 LG----PKPYKELPAYLAG-FDVAILPFRLNELTRATSPLKLFEYLAAGKPVVATPLPEVR---RYEDEVVL-IADDPEE 329 (373)
T ss_pred eC----CCCHHHHHHHHHh-CCEEecCCccchhhhcCCcchHHHHhccCCCEEecCcHHHH---hhcCcEEE-eCCCHHH
Confidence 99 7778999999995 999999986 346899999999999999999866544 34433444 4569999
Q ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Q 003947 696 ATGILVDFFEKCKVDPGHWDEISQGGLKRIQEKYTWKIYSERLLNLSG 743 (784)
Q Consensus 696 lAe~I~~~l~~ll~dp~~~~~m~~~a~~~v~~~ytw~~~a~~ll~ly~ 743 (784)
++++|.+++. .+.....+ ++.+ +.+.|||+..++++++...
T Consensus 330 ~~~ai~~~l~---~~~~~~~~---~~~~-~~~~~sW~~~a~~~~~~l~ 370 (373)
T cd04950 330 FVAAIEKALL---EDGPARER---RRLR-LAAQNSWDARAAEMLEALQ 370 (373)
T ss_pred HHHHHHHHHh---cCCchHHH---HHHH-HHHHCCHHHHHHHHHHHHH
Confidence 9999987542 23222211 2222 5689999999999996543
No 80
>PLN02605 monogalactosyldiacylglycerol synthase
Probab=99.88 E-value=1e-20 Score=211.75 Aligned_cols=265 Identities=13% Similarity=0.135 Sum_probs=183.5
Q ss_pred CCCceEEEEcCCChh-HHHHHHHH-----hCCCcEEEEecCCcccCCCCCcchhhhccccccccchhhhhHHHhcccCEE
Q 003947 381 QCKPDLIIGNYSDGN-IVASLLAH-----KLDVTQCTIAHALELTKYPDSDINWKKLDDKYHFSCQFTADLFAMNRTDFI 454 (784)
Q Consensus 381 ~~~pDIIh~~~~~~~-lva~llar-----~~gvp~V~t~H~l~~~k~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~I 454 (784)
+.+||+||++.+..+ ..+..+++ ..++|++++++++.... ..+..+.+|.+
T Consensus 98 ~~~pDvIi~thp~~~~~~~~~l~~~~~~~~~~~p~~~~~tD~~~~~-----------------------~~w~~~~~d~~ 154 (382)
T PLN02605 98 KYKPDIIVSVHPLMQHVPLRVLRWQGKELGKKIPFTTVVTDLGTCH-----------------------PTWFHKGVTRC 154 (382)
T ss_pred hcCcCEEEEeCcCcccCHHHHHHHHhhccCCCCCEEEEECCCCCcC-----------------------cccccCCCCEE
Confidence 458999999765532 12223332 24789888877652100 01246789999
Q ss_pred EecChHhHhhccccccccccccccccccceeeecCCCCCCCceEEecCCCCCCCCCCCcHHHHhhhcchhhhHHhhcCch
Q 003947 455 ITSTFQEIAGSKDTVGQYESHTAFSLPGLYRVVNGIDAFDPKFNIVSPGADMTIYFPYMEEKRRLKHFHSEIEELLYSPV 534 (784)
Q Consensus 455 It~S~~~~~~~~~~vgqYe~~~~f~~p~l~~~~~gi~~f~~k~~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~ 534 (784)
++.|+...+.. ...|++ .+|+.++++++|.+.+.+.....
T Consensus 155 ~~~s~~~~~~l--------------------~~~g~~--~~ki~v~g~~v~~~f~~~~~~~~------------------ 194 (382)
T PLN02605 155 FCPSEEVAKRA--------------------LKRGLE--PSQIRVYGLPIRPSFARAVRPKD------------------ 194 (382)
T ss_pred EECCHHHHHHH--------------------HHcCCC--HHHEEEECcccCHhhccCCCCHH------------------
Confidence 99998776521 123554 77999999999876544322111
Q ss_pred hhhhhhccccCCCCCEEEEEecccCCCChHHHHHHHHHhH----ccCCCeE-EEEEeCCCCCCcccHHHHHHHHHHHHHH
Q 003947 535 ENKEHLCVLKDSSKPILFTMARLDRVKNLTGLVEWYGKNA----KLRELVN-LVVVGGDRRKESKDLEEQAEMKKMYGLI 609 (784)
Q Consensus 535 ~~~~~~gll~~~~k~iIl~vGRL~~~Kgi~~LieA~~~l~----~~~~~v~-LvIVG~g~~~~s~d~ee~~~~~~l~~li 609 (784)
..++++|+ ++++++|+++|+....|++..+++++.... ...++.+ ++++|.+. ...+.+.+.
T Consensus 195 ~~r~~~gl--~~~~~~il~~Gg~~g~~~~~~li~~l~~~~~~~~~~~~~~~~~vi~G~~~----------~~~~~L~~~- 261 (382)
T PLN02605 195 ELRRELGM--DEDLPAVLLMGGGEGMGPLEETARALGDSLYDKNLGKPIGQVVVICGRNK----------KLQSKLESR- 261 (382)
T ss_pred HHHHHcCC--CCCCcEEEEECCCcccccHHHHHHHHHHhhccccccCCCceEEEEECCCH----------HHHHHHHhh-
Confidence 22456787 678899999999999999999999987643 1135565 55666551 112223222
Q ss_pred HhcCCCCcEEEccCcCCcCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcCc------cccccccccCc
Q 003947 610 DTYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCN------GGPAEIIVHGK 683 (784)
Q Consensus 610 ~~l~L~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMA~GlPVIaT~~------GG~~EiI~dg~ 683 (784)
....+|+|+|+++ ++..+|+ ++|++|.++ .|+|++|||+||+|+|+++. |+...++ ++.
T Consensus 262 ---~~~~~v~~~G~~~------~~~~l~~-aaDv~V~~~----g~~ti~EAma~g~PvI~~~~~pgqe~gn~~~i~-~~g 326 (382)
T PLN02605 262 ---DWKIPVKVRGFVT------NMEEWMG-ACDCIITKA----GPGTIAEALIRGLPIILNGYIPGQEEGNVPYVV-DNG 326 (382)
T ss_pred ---cccCCeEEEeccc------cHHHHHH-hCCEEEECC----CcchHHHHHHcCCCEEEecCCCccchhhHHHHH-hCC
Confidence 2245799999543 6888888 599999865 48899999999999999983 4454444 444
Q ss_pred eEEEECCCCHHHHHHHHHHHHHHhcCC-HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Q 003947 684 SGFHIDPYKGDQATGILVDFFEKCKVD-PGHWDEISQGGLKRIQEKYTWKIYSERLLNLSG 743 (784)
Q Consensus 684 ~G~li~p~d~e~lAe~I~~~l~~ll~d-p~~~~~m~~~a~~~v~~~ytw~~~a~~ll~ly~ 743 (784)
.|+.+ .|+++++++|.+++ .| ++.+++|+++++++. ...+++.+++.+.++..
T Consensus 327 ~g~~~--~~~~~la~~i~~ll----~~~~~~~~~m~~~~~~~~-~~~a~~~i~~~l~~~~~ 380 (382)
T PLN02605 327 FGAFS--ESPKEIARIVAEWF----GDKSDELEAMSENALKLA-RPEAVFDIVHDLHELVR 380 (382)
T ss_pred ceeec--CCHHHHHHHHHHHH----cCCHHHHHHHHHHHHHhc-CCchHHHHHHHHHHHhh
Confidence 67654 79999999998544 56 999999999999987 78889999988877643
No 81
>PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional
Probab=99.87 E-value=5.7e-21 Score=230.06 Aligned_cols=324 Identities=13% Similarity=0.104 Sum_probs=214.6
Q ss_pred HHHHHHHHHHHHcCCCceEEEEcCCChhHHHHHHHHhC-CCcEEEEecCCcccCCCCCcchhhhccccccccchhhhhHH
Q 003947 368 FTEDVATEIIQELQCKPDLIIGNYSDGNIVASLLAHKL-DVTQCTIAHALELTKYPDSDINWKKLDDKYHFSCQFTADLF 446 (784)
Q Consensus 368 f~~~~~~~i~~~~~~~pDIIh~~~~~~~lva~llar~~-gvp~V~t~H~l~~~k~~~s~~~~~~~~~~y~~~~~~~~e~~ 446 (784)
..+..+..+.+..+ .-|+|..|+....+++..+.++. ..++.+..|..++ .+++... ......-..
T Consensus 119 vN~~fA~~~~~~~~-~~d~vwvhDYhl~l~p~~lr~~~~~~~igfFlH~pfP----~~~~f~~--------lp~~~~ll~ 185 (726)
T PRK14501 119 VNQRFAEAIAAIAR-PGDVVWVHDYQLMLLPAMLRERLPDARIGFFLHIPFP----SFEVFRL--------LPWREEILE 185 (726)
T ss_pred HHHHHHHHHHHhcC-CCCEEEEeCchhhhHHHHHHhhCCCCcEEEEeeCCCC----ChHHHhh--------CCChHHHHH
Confidence 33344445554433 34999999999988888887653 4678888887543 2222211 111122234
Q ss_pred HhcccCEEEecChHhHhhccccccccccccccccccceeeecCCCCCCCceEEecCCCCCCCCCCCcHHH---Hhhhcch
Q 003947 447 AMNRTDFIITSTFQEIAGSKDTVGQYESHTAFSLPGLYRVVNGIDAFDPKFNIVSPGADMTIYFPYMEEK---RRLKHFH 523 (784)
Q Consensus 447 a~~~AD~IIt~S~~~~~~~~~~vgqYe~~~~f~~p~l~~~~~gi~~f~~k~~VIpnGvD~~~f~p~~~~~---~rl~~~~ 523 (784)
.|-.+|.|-..|........+.....-.. -+..+ .....|- ..++.++|||||.+.|.+..... .+...
T Consensus 186 ~ll~~Dligf~t~~~~r~Fl~~~~~~l~~--~~~~~-~~~~~gr---~~~v~v~p~GID~~~f~~~~~~~~~~~~~~~-- 257 (726)
T PRK14501 186 GLLGADLIGFHTYDYVRHFLSSVLRVLGY--ETELG-EIRLGGR---IVRVDAFPMGIDYDKFHNSAQDPEVQEEIRR-- 257 (726)
T ss_pred HHhcCCeEEeCCHHHHHHHHHHHHHHcCC--ccCCC-eEEECCE---EEEEEEEECeEcHHHHHHHhcCchHHHHHHH--
Confidence 78899999998877655332221110000 00000 0111111 23688999999999887643211 11000
Q ss_pred hhhHHhhcCchhhhhhhccccCCCCCEEEEEecccCCCChHHHHHHHHHhHccCCC----eEEEEEeCCCCCCcccHHHH
Q 003947 524 SEIEELLYSPVENKEHLCVLKDSSKPILFTMARLDRVKNLTGLVEWYGKNAKLREL----VNLVVVGGDRRKESKDLEEQ 599 (784)
Q Consensus 524 ~~~~~~l~~~~~~~~~~gll~~~~k~iIl~vGRL~~~Kgi~~LieA~~~l~~~~~~----v~LvIVG~g~~~~s~d~ee~ 599 (784)
.++. .+++++|+++||+++.||+..+++|++++.+.+|+ ++|+++|.+.... ..++.
T Consensus 258 ------------lr~~-----~~~~~~il~VgRl~~~Kgi~~~l~A~~~ll~~~p~~~~~v~lv~v~~~sr~~--~~~~~ 318 (726)
T PRK14501 258 ------------LRQD-----LRGRKIILSIDRLDYTKGIPRRLLAFERFLEKNPEWRGKVRLVQVAVPSRTG--VPQYQ 318 (726)
T ss_pred ------------HHHH-----cCCCEEEEEecCcccccCHHHHHHHHHHHHHhCccccCCEEEEEEecCCCcc--hHHHH
Confidence 0111 24678999999999999999999999998776675 7899998542210 12333
Q ss_pred HHHHHHHHHHHhcCC-------CCcEEEccCcCCcCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcC-----CcE
Q 003947 600 AEMKKMYGLIDTYKL-------NGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCG-----LPT 667 (784)
Q Consensus 600 ~~~~~l~~li~~l~L-------~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMA~G-----lPV 667 (784)
+..+.+.+++.+.+- .+.+.+.| .++.+++..+|+. +|+||+||..||||++++|||||| .||
T Consensus 319 ~l~~~~~~~v~~in~~~~~~~~~pv~~~~~----~~~~~~l~~ly~~-aDv~v~~S~~EG~~lv~~Eama~~~~~~g~~v 393 (726)
T PRK14501 319 EMKREIDELVGRINGEFGTVDWTPIHYFYR----SLPFEELVALYRA-ADVALVTPLRDGMNLVAKEYVASRTDGDGVLI 393 (726)
T ss_pred HHHHHHHHHHHHHHhhcCCCCcceEEEEeC----CCCHHHHHHHHHh-ccEEEecccccccCcccceEEEEcCCCCceEE
Confidence 444555555554331 12334555 6788999999995 999999999999999999999994 566
Q ss_pred EEcCccccccccccCceEEEECCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Q 003947 668 FATCNGGPAEIIVHGKSGFHIDPYKGDQATGILVDFFEKCKVDPGHWDEISQGGLKRIQEKYTWKIYSERLLNLSGV 744 (784)
Q Consensus 668 IaT~~GG~~EiI~dg~~G~li~p~d~e~lAe~I~~~l~~ll~dp~~~~~m~~~a~~~v~~~ytw~~~a~~ll~ly~~ 744 (784)
++...|+..+++ .|++++|.|++++|++|.+++. .+++.+.+..+++++++ .+|||..+++++++.|+.
T Consensus 394 ls~~~G~~~~l~----~~llv~P~d~~~la~ai~~~l~---~~~~e~~~r~~~~~~~v-~~~~~~~w~~~~l~~l~~ 462 (726)
T PRK14501 394 LSEMAGAAAELA----EALLVNPNDIEGIAAAIKRALE---MPEEEQRERMQAMQERL-RRYDVHKWASDFLDELRE 462 (726)
T ss_pred EecccchhHHhC----cCeEECCCCHHHHHHHHHHHHc---CCHHHHHHHHHHHHHHH-HhCCHHHHHHHHHHHHHH
Confidence 667778888875 4899999999999999986552 33445555567889988 799999999999998875
No 82
>cd01635 Glycosyltransferase_GTB_type Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. The structures of the formed glycoconjugates are extremely diverse, reflecting a wide range of biological functions. The members of this family share a common GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=99.86 E-value=7.9e-20 Score=185.07 Aligned_cols=121 Identities=31% Similarity=0.518 Sum_probs=102.7
Q ss_pred EEecccCCCChHHHHHHHHHhHccCCCeEEEEEeCCCCCCcccHHHHHHHHHHHHHHHhcCCCCcEEEccCcCCcCChhH
Q 003947 553 TMARLDRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYGLIDTYKLNGQFRWISSQMNRVRNGE 632 (784)
Q Consensus 553 ~vGRL~~~Kgi~~LieA~~~l~~~~~~v~LvIVG~g~~~~s~d~ee~~~~~~l~~li~~l~L~~~V~flG~~~~~v~~~e 632 (784)
++|++.+.||++.+++++..+.+..++++++++|++.+. ......+..++..++|.++| .++..+
T Consensus 109 ~~g~~~~~k~~~~~~~a~~~l~~~~~~~~~~i~G~~~~~-----------~~~~~~~~~~~~~~~v~~~~----~~~~~~ 173 (229)
T cd01635 109 FVGRLAPEKGLDDLIEAFALLKERGPDLKLVIAGDGPER-----------EYLEELLAALLLLDRVIFLG----GLDPEE 173 (229)
T ss_pred EEEeecccCCHHHHHHHHHHHHHhCCCeEEEEEeCCCCh-----------HHHHHHHHhcCCcccEEEeC----CCCcHH
Confidence 999999999999999999999888889999999998651 22333366778889999999 443344
Q ss_pred HHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcCccccccccccCceEEEE
Q 003947 633 LYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCNGGPAEIIVHGKSGFHI 688 (784)
Q Consensus 633 l~~~la~aadvfV~PS~~E~fGltvlEAMA~GlPVIaT~~GG~~EiI~dg~~G~li 688 (784)
....+.+.+|+++.|+..|++|++++|||+||+|+|+|+.++..|++.++.+|+++
T Consensus 174 ~~~~~~~~~di~l~~~~~e~~~~~~~Eam~~g~pvi~s~~~~~~e~i~~~~~g~~~ 229 (229)
T cd01635 174 LLALLLAAADVFVLPSLREGFGLVVLEAMACGLPVIATDVGGPPEIVEDGLTGLLV 229 (229)
T ss_pred HHHHHhhcCCEEEecccccCcChHHHHHHhCCCCEEEcCCCCcceEEECCCceEEC
Confidence 45555435999999999999999999999999999999999999999999999874
No 83
>TIGR02094 more_P_ylases alpha-glucan phosphorylases. This family consists of known phosphorylases, and homologs believed to share the function of using inorganic phosphate to cleave an alpha 1,4 linkage between the terminal glucose residue and the rest of the polymer (maltodextrin, glycogen, etc.). The name of the glucose storage polymer substrate, and therefore the name of this enzyme, depends on the chain lengths and branching patterns. A number of the members of this family have been shown to operate on small maltodextrins, as may be obtained by utilization of exogenous sources. This family represents a distinct clade from the related family modeled by TIGR02093/PF00343.
Probab=99.84 E-value=3.6e-19 Score=207.96 Aligned_cols=342 Identities=14% Similarity=0.151 Sum_probs=233.2
Q ss_pred HHcCCCceEEEEcCCChhHHHHHHHHh--------------CCCcEEEEecCCcccC---CCCCc-------------ch
Q 003947 378 QELQCKPDLIIGNYSDGNIVASLLAHK--------------LDVTQCTIAHALELTK---YPDSD-------------IN 427 (784)
Q Consensus 378 ~~~~~~pDIIh~~~~~~~lva~llar~--------------~gvp~V~t~H~l~~~k---~~~s~-------------~~ 427 (784)
+.+..+||+||+|.+.++++...+.+. .+.+.++|.|++...- ++... +.
T Consensus 156 ~~l~~~pdviH~ND~Htal~~~el~r~l~~~~~~~~~a~~~~~~~~vfTiHt~~~qG~e~f~~~~~~~~~~~~~~~~gl~ 235 (601)
T TIGR02094 156 RALGIDPDVYHLNEGHAAFVTLERIRELIAQGLSFEEAWEAVRKSSLFTTHTPVPAGHDVFPEDLMRKYFGDYAANLGLP 235 (601)
T ss_pred HHcCCCceEEEeCCchHHHHHHHHHHHHHHcCCCHHHHHHhcCCeEEEeCCCchHHHhhhcCHHHHHHHhhhhhhHhCCC
Confidence 334679999999999998877665332 1366899999976543 22111 11
Q ss_pred hhhccc---ccc-ccchhhhhHHHhcccCEEEecChHhHhhccccccccccccccccccceeeecCCCCCCCceEEecCC
Q 003947 428 WKKLDD---KYH-FSCQFTADLFAMNRTDFIITSTFQEIAGSKDTVGQYESHTAFSLPGLYRVVNGIDAFDPKFNIVSPG 503 (784)
Q Consensus 428 ~~~~~~---~y~-~~~~~~~e~~a~~~AD~IIt~S~~~~~~~~~~vgqYe~~~~f~~p~l~~~~~gi~~f~~k~~VIpnG 503 (784)
+..+.. .+. ...++..-+.++..||.|.+||+...+-.++..+. ++ .+.+....++.-|.||
T Consensus 236 ~~~~~~~~~~~~~~~~~vnm~~lai~~S~~vngVS~lh~~v~~~l~~~-----------l~---~~~~~~~~~i~gItNG 301 (601)
T TIGR02094 236 REQLLALGRENPDDPEPFNMTVLALRLSRIANGVSKLHGEVSRKMWQF-----------LY---PGYEEEEVPIGYVTNG 301 (601)
T ss_pred HHHHHhhhhhccCccCceeHHHHHHHhCCeeeeecHHHHHHHHHHHHh-----------hh---hhcccccCCccceeCC
Confidence 110000 000 00123344578999999999998766522211111 00 0111113358889999
Q ss_pred CCCCCCCCCcHHHHhhhcchhh---------------------h-HHhhcCchhhhh---------------------hh
Q 003947 504 ADMTIYFPYMEEKRRLKHFHSE---------------------I-EELLYSPVENKE---------------------HL 540 (784)
Q Consensus 504 vD~~~f~p~~~~~~rl~~~~~~---------------------~-~~~l~~~~~~~~---------------------~~ 540 (784)
||...|.|.+...-.-+-.... + +...-++....+ .+
T Consensus 302 Id~~~W~~~~~~~l~~~y~~~~w~~~~~~~~~~~~~~~~~~~~l~~~K~~~K~~L~~~v~~~~~~~~~~~g~~~~~~~~~ 381 (601)
T TIGR02094 302 VHNPTWVAPELRDLYERYLGENWRELLADEELWEAIDDIPDEELWEVHLKLKARLIDYIRRRLRERWLRRGADAAILMAT 381 (601)
T ss_pred ccccccCCHHHHHHHHHhCCcchhccchhhhhhhhcccccHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccCcchhhhhh
Confidence 9999998754332100000000 0 011111111111 35
Q ss_pred ccccCCCCCEEEEEecccCCCChHHHHHHHHHhHcc--C--CCeEEEEEeCCCCCCcccHHHHHHHHHHHHHHHhcCCCC
Q 003947 541 CVLKDSSKPILFTMARLDRVKNLTGLVEWYGKNAKL--R--ELVNLVVVGGDRRKESKDLEEQAEMKKMYGLIDTYKLNG 616 (784)
Q Consensus 541 gll~~~~k~iIl~vGRL~~~Kgi~~LieA~~~l~~~--~--~~v~LvIVG~g~~~~s~d~ee~~~~~~l~~li~~l~L~~ 616 (784)
|+..+++.+++++++|+..+||.+.+++++.++.+. . ..+++|+.|.+.+ .|...++.++.+.+++++...++
T Consensus 382 gl~~dpd~~~ig~v~Rl~~yKr~dLil~~i~~l~~i~~~~~~pvq~V~~Gka~p---~d~~gk~~i~~i~~la~~~~~~~ 458 (601)
T TIGR02094 382 DRFLDPDVLTIGFARRFATYKRADLIFRDLERLARILNNPERPVQIVFAGKAHP---ADGEGKEIIQRIVEFSKRPEFRG 458 (601)
T ss_pred ccccCCCCcEEEEEEcchhhhhHHHHHHHHHHHHHHhhCCCCCeEEEEEEecCc---ccchHHHHHHHHHHHHhcccCCC
Confidence 555678999999999999999999999998888642 1 4699999999965 24455667788888888766788
Q ss_pred cEEEccCcCCcCChhHHHHHHHccccEEEe-CCC-CCCCcHHHHHHHHcCCcEEEcCccccccccccCceEEEECC----
Q 003947 617 QFRWISSQMNRVRNGELYRYICDTKGAFVQ-PAL-YEAFGLTVVEAMTCGLPTFATCNGGPAEIIVHGKSGFHIDP---- 690 (784)
Q Consensus 617 ~V~flG~~~~~v~~~el~~~la~aadvfV~-PS~-~E~fGltvlEAMA~GlPVIaT~~GG~~EiI~dg~~G~li~p---- 690 (784)
+|.|+- .. +..+.+.+-.++|++++ ||. +|++|++-+=||..|.+.+++..|...|.. ++.|||.|.+
T Consensus 459 kv~f~~----~Y-d~~lA~~i~aG~Dv~L~~Psr~~EacGtsqMka~~nGgL~~sv~DG~~~E~~-~~~nGf~f~~~~~~ 532 (601)
T TIGR02094 459 RIVFLE----NY-DINLARYLVSGVDVWLNNPRRPLEASGTSGMKAAMNGVLNLSILDGWWGEGY-DGDNGWAIGDGEEY 532 (601)
T ss_pred CEEEEc----CC-CHHHHHHHhhhheeEEeCCCCCcCCchHHHHHHHHcCCceeecccCcccccC-CCCcEEEECCCccc
Confidence 999985 23 33555555557999999 999 999999999999999999999999988887 6679999984
Q ss_pred --------CCHHHHHHHHHHHH-HHhcCC-----HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Q 003947 691 --------YKGDQATGILVDFF-EKCKVD-----PGHWDEISQGGLKRIQEKYTWKIYSERLLNLS 742 (784)
Q Consensus 691 --------~d~e~lAe~I~~~l-~~ll~d-----p~~~~~m~~~a~~~v~~~ytw~~~a~~ll~ly 742 (784)
.|++++-++|.+.+ ....++ |..|.+|.++|.+.....|||++++++|.++|
T Consensus 533 ~~~~~~d~~da~~l~~~L~~ai~~~yy~~~~~~~p~~W~~~~k~am~~~~~~fsw~r~a~~Y~~~y 598 (601)
T TIGR02094 533 DDEEEQDRLDAEALYDLLENEVIPLYYDRDEKGIPADWVEMMKESIATIAPRFSTNRMVREYVDKF 598 (601)
T ss_pred cccccccCCCHHHHHHHHHHHHHHHHhcCCcccCcHHHHHHHHHHHhccCCCCCHHHHHHHHHHHh
Confidence 78999999997766 223343 66799999999988777899999999999987
No 84
>COG0438 RfaG Glycosyltransferase [Cell envelope biogenesis, outer membrane]
Probab=99.84 E-value=1e-18 Score=184.44 Aligned_cols=291 Identities=23% Similarity=0.296 Sum_probs=208.9
Q ss_pred ceEEEEcCCChhH---HHHHHHHhCCCcEEEEecCCcccCCCCCcchhhhccccccccchhhhhHHHhcccCEEEecChH
Q 003947 384 PDLIIGNYSDGNI---VASLLAHKLDVTQCTIAHALELTKYPDSDINWKKLDDKYHFSCQFTADLFAMNRTDFIITSTFQ 460 (784)
Q Consensus 384 pDIIh~~~~~~~l---va~llar~~gvp~V~t~H~l~~~k~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~~ 460 (784)
+|++|.+...... .........+.+.+...|....................+. ...........++.+++.+..
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~ 160 (381)
T COG0438 84 YDIIHAHSLLLAPGGLLALLLLKLLGIPLVVTLHGLIPRILLLPRLLLLLGLLRLL---LKRLKKALRLLADRVIAVSPA 160 (381)
T ss_pred cceeeccccccccchhHHHhhccccCCcEEEeecCCcccccccccchhhHHHHHHH---HHHHHHhccccccEEEECCHH
Confidence 5999987765533 3555666677888888887654221111111000000000 000011112247778888765
Q ss_pred hHhhccccccccccccccccccceeeecCCCCCCCceEEecCCCCCCCCCCCcHHHHhhhcchhhhHHhhcCchhhhhhh
Q 003947 461 EIAGSKDTVGQYESHTAFSLPGLYRVVNGIDAFDPKFNIVSPGADMTIYFPYMEEKRRLKHFHSEIEELLYSPVENKEHL 540 (784)
Q Consensus 461 ~~~~~~~~vgqYe~~~~f~~p~l~~~~~gi~~f~~k~~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~~ 540 (784)
...-.+. ... ..++.++||+++...+.+.. .
T Consensus 161 ~~~~~~~--------------------~~~---~~~~~~~~~~~~~~~~~~~~--------------------------~ 191 (381)
T COG0438 161 LKELLEA--------------------LGV---PNKIVVIPNGIDTEKFAPAR--------------------------I 191 (381)
T ss_pred HHHHHHH--------------------hCC---CCCceEecCCcCHHHcCccc--------------------------c
Confidence 4221000 011 33788999999988776530 1
Q ss_pred ccccCCCCCEEEEEecccCCCChHHHHHHHHHhHccCCCeEEEEEeCCCCCCcccHHHHHHHHHHHHHHHhcCCCCcEEE
Q 003947 541 CVLKDSSKPILFTMARLDRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYGLIDTYKLNGQFRW 620 (784)
Q Consensus 541 gll~~~~k~iIl~vGRL~~~Kgi~~LieA~~~l~~~~~~v~LvIVG~g~~~~s~d~ee~~~~~~l~~li~~l~L~~~V~f 620 (784)
++.....+.+++++||+.+.||++.+++++..+.+..+++.++++|.+... .+.+...+.+++..+++.|
T Consensus 192 ~~~~~~~~~~i~~~g~~~~~k~~~~~i~~~~~~~~~~~~~~~~~~g~~~~~----------~~~~~~~~~~~~~~~~v~~ 261 (381)
T COG0438 192 GLLPEGGKFVVLYVGRLDPEKGLDLLIEAAAKLKKRGPDIKLVIVGDGPER----------REELEKLAKKLGLEDNVKF 261 (381)
T ss_pred CCCcccCceEEEEeeccChhcCHHHHHHHHHHhhhhcCCeEEEEEcCCCcc----------HHHHHHHHHHhCCCCcEEE
Confidence 111011147899999999999999999999999887677999999999641 2445568888888889999
Q ss_pred ccCcCCcCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHHHHHHHH
Q 003947 621 ISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCNGGPAEIIVHGKSGFHIDPYKGDQATGIL 700 (784)
Q Consensus 621 lG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMA~GlPVIaT~~GG~~EiI~dg~~G~li~p~d~e~lAe~I 700 (784)
+| .++.+++..+++. +|++++||..|+||++++|||+||+|||+++.+|..+++.++.+|+++++.|.+++++++
T Consensus 262 ~g----~~~~~~~~~~~~~-~~~~v~ps~~e~~~~~~~Ea~a~g~pvi~~~~~~~~e~~~~~~~g~~~~~~~~~~~~~~i 336 (381)
T COG0438 262 LG----YVPDEELAELLAS-ADVFVLPSLSEGFGLVLLEAMAAGTPVIASDVGGIPEVVEDGETGLLVPPGDVEELADAL 336 (381)
T ss_pred ec----ccCHHHHHHHHHh-CCEEEeccccccchHHHHHHHhcCCcEEECCCCChHHHhcCCCceEecCCCCHHHHHHHH
Confidence 98 5556788888875 899999999999999999999999999999999999999998778887777899999999
Q ss_pred HHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHh
Q 003947 701 VDFFEKCKVDPGHWDEISQGGLKRIQEKYTWKIYSERLLNLSGVY 745 (784)
Q Consensus 701 ~~~l~~ll~dp~~~~~m~~~a~~~v~~~ytw~~~a~~ll~ly~~~ 745 (784)
..++ ++++.++.+++.+++.+.+.|+|+.+++++.+++...
T Consensus 337 ~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 377 (381)
T COG0438 337 EQLL----EDPELREELGEAARERVEEEFSWERIAEQLLELYEEL 377 (381)
T ss_pred HHHh----cCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHH
Confidence 8554 6778889999878888878999999999999988753
No 85
>PRK13608 diacylglycerol glucosyltransferase; Provisional
Probab=99.83 E-value=6.1e-19 Score=198.13 Aligned_cols=263 Identities=15% Similarity=0.159 Sum_probs=177.4
Q ss_pred CCCceEEEEcCCChhHHHHHHHHhCCCcEEEEecCCcccCCCCCcchhhhccccccccchhhhhHHHhcccCEEEecChH
Q 003947 381 QCKPDLIIGNYSDGNIVASLLAHKLDVTQCTIAHALELTKYPDSDINWKKLDDKYHFSCQFTADLFAMNRTDFIITSTFQ 460 (784)
Q Consensus 381 ~~~pDIIh~~~~~~~lva~llar~~gvp~V~t~H~l~~~k~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~~ 460 (784)
+.+||+||++.+.+++.....++..++|+++..++..... . +..+.+|.+++.|+.
T Consensus 102 ~~kPDvVi~~~p~~~~~~l~~~~~~~iP~~~v~td~~~~~------~------------------w~~~~~d~~~v~s~~ 157 (391)
T PRK13608 102 KEKPDLILLTFPTPVMSVLTEQFNINIPVATVMTDYRLHK------N------------------WITPYSTRYYVATKE 157 (391)
T ss_pred HhCcCEEEECCcHHHHHHHHHhcCCCCCEEEEeCCCCccc------c------------------cccCCCCEEEECCHH
Confidence 3599999997665543333333456899865544321000 0 235679999999988
Q ss_pred hHhhccccccccccccccccccceeeecCCCCCCCceEEecCCCCCCCCCCCcHHHHhhhcchhhhHHhhcCchhhhhhh
Q 003947 461 EIAGSKDTVGQYESHTAFSLPGLYRVVNGIDAFDPKFNIVSPGADMTIYFPYMEEKRRLKHFHSEIEELLYSPVENKEHL 540 (784)
Q Consensus 461 ~~~~~~~~vgqYe~~~~f~~p~l~~~~~gi~~f~~k~~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~~ 540 (784)
..+.. ...|++ ..|+.+++++++.....+.... +.++++
T Consensus 158 ~~~~l--------------------~~~gi~--~~ki~v~GiPv~~~f~~~~~~~-------------------~~~~~~ 196 (391)
T PRK13608 158 TKQDF--------------------IDVGID--PSTVKVTGIPIDNKFETPIDQK-------------------QWLIDN 196 (391)
T ss_pred HHHHH--------------------HHcCCC--HHHEEEECeecChHhcccccHH-------------------HHHHHc
Confidence 76521 123554 6788898888775432222111 112346
Q ss_pred ccccCCCCCE-EEEEecccCCCChHHHHHHHHHhHccCCCeEEEEEeCCCCCCcccHHHHHHHHHHHHHHHhcCCCCcEE
Q 003947 541 CVLKDSSKPI-LFTMARLDRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYGLIDTYKLNGQFR 619 (784)
Q Consensus 541 gll~~~~k~i-Il~vGRL~~~Kgi~~LieA~~~l~~~~~~v~LvIVG~g~~~~s~d~ee~~~~~~l~~li~~l~L~~~V~ 619 (784)
|+ ++++++ +++.|+++..||++.+++++.+ ..+++++++++|+.. ... .++.+.++..++|.
T Consensus 197 ~l--~~~~~~ilv~~G~lg~~k~~~~li~~~~~---~~~~~~~vvv~G~~~---------~l~---~~l~~~~~~~~~v~ 259 (391)
T PRK13608 197 NL--DPDKQTILMSAGAFGVSKGFDTMITDILA---KSANAQVVMICGKSK---------ELK---RSLTAKFKSNENVL 259 (391)
T ss_pred CC--CCCCCEEEEECCCcccchhHHHHHHHHHh---cCCCceEEEEcCCCH---------HHH---HHHHHHhccCCCeE
Confidence 65 455555 5678999989999999998632 336789887765421 111 22333345556899
Q ss_pred EccCcCCcCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcC-cccc----ccccccCceEEEECCCCHH
Q 003947 620 WISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATC-NGGP----AEIIVHGKSGFHIDPYKGD 694 (784)
Q Consensus 620 flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMA~GlPVIaT~-~GG~----~EiI~dg~~G~li~p~d~e 694 (784)
++|++. ++..+|+. +|++|. ++.|+|+.|||+||+|+|+++ .+|- ..++.+...|+. +.|.+
T Consensus 260 ~~G~~~------~~~~~~~~-aDl~I~----k~gg~tl~EA~a~G~PvI~~~~~pgqe~~N~~~~~~~G~g~~--~~~~~ 326 (391)
T PRK13608 260 ILGYTK------HMNEWMAS-SQLMIT----KPGGITISEGLARCIPMIFLNPAPGQELENALYFEEKGFGKI--ADTPE 326 (391)
T ss_pred EEeccc------hHHHHHHh-hhEEEe----CCchHHHHHHHHhCCCEEECCCCCCcchhHHHHHHhCCcEEE--eCCHH
Confidence 999543 68888884 999997 357999999999999999995 3331 223334445655 45899
Q ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Q 003947 695 QATGILVDFFEKCKVDPGHWDEISQGGLKRIQEKYTWKIYSERLLNLSG 743 (784)
Q Consensus 695 ~lAe~I~~~l~~ll~dp~~~~~m~~~a~~~v~~~ytw~~~a~~ll~ly~ 743 (784)
+++++|. .+++|++.+++|++++++.. +.++++.+++.+++++.
T Consensus 327 ~l~~~i~----~ll~~~~~~~~m~~~~~~~~-~~~s~~~i~~~l~~l~~ 370 (391)
T PRK13608 327 EAIKIVA----SLTNGNEQLTNMISTMEQDK-IKYATQTICRDLLDLIG 370 (391)
T ss_pred HHHHHHH----HHhcCHHHHHHHHHHHHHhc-CCCCHHHHHHHHHHHhh
Confidence 9998887 45589999999999999986 77999999999998765
No 86
>TIGR02398 gluc_glyc_Psyn glucosylglycerol-phosphate synthase. Glucosylglycerol-phosphate synthase catalyzes the key step in the biosynthesis of the osmolyte glucosylglycerol. It is known in several cyanobacteria and in Pseudomonas anguilliseptica. The enzyme is closely related to the alpha,alpha-trehalose-phosphate synthase, likewise involved in osmolyte biosynthesis, of E. coli and many other bacteria. A close homolog from Xanthomonas campestris is excluded from this model and scores between trusted and noise.
Probab=99.81 E-value=9.6e-18 Score=191.02 Aligned_cols=325 Identities=11% Similarity=0.069 Sum_probs=219.5
Q ss_pred HHHHHHHHHcCCCceEEEEcCCChhHHHHHHHHhC-CCcEEEEecCCcccCCCCCcchhhhccccccccchhhhhHHHhc
Q 003947 371 DVATEIIQELQCKPDLIIGNYSDGNIVASLLAHKL-DVTQCTIAHALELTKYPDSDINWKKLDDKYHFSCQFTADLFAMN 449 (784)
Q Consensus 371 ~~~~~i~~~~~~~pDIIh~~~~~~~lva~llar~~-gvp~V~t~H~l~~~k~~~s~~~~~~~~~~y~~~~~~~~e~~a~~ 449 (784)
..+..+.+.. ..-|+|-.|+....+++..+.++. ..++-+-.|..++ .+++. +.+.....-+..|-
T Consensus 121 ~FA~~i~~~~-~~~d~vWVhDYhL~llp~~LR~~~~~~~IgfFlHiPFP----s~eif--------r~LP~r~~ll~glL 187 (487)
T TIGR02398 121 AFAEAACLEA-AEGATVWVHDYNLWLVPGYIRQLRPDLKIAFFHHTPFP----SADVF--------NILPWREQIIGSLL 187 (487)
T ss_pred HHHHHHHHhc-CCCCEEEEecchhhHHHHHHHHhCCCCeEEEEeeCCCC----ChHHH--------hhCCchHHHHHHHh
Confidence 3344444432 244899999999888888887653 4567777776533 22221 11111122334788
Q ss_pred ccCEEEecChHhHhhcccccccccccccccc----ccc---------eeeecCCCCCC--CceEEecCCCCCCCCCCCcH
Q 003947 450 RTDFIITSTFQEIAGSKDTVGQYESHTAFSL----PGL---------YRVVNGIDAFD--PKFNIVSPGADMTIYFPYME 514 (784)
Q Consensus 450 ~AD~IIt~S~~~~~~~~~~vgqYe~~~~f~~----p~l---------~~~~~gi~~f~--~k~~VIpnGvD~~~f~p~~~ 514 (784)
.||.|=+.|+..+....+..........-.- +.. .....++.+.. -++.++|.|||.+.|.+...
T Consensus 188 ~aDliGFqt~~y~~~Fl~~~~r~lg~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~gr~v~v~~~PiGID~~~f~~~~~ 267 (487)
T TIGR02398 188 CCDYIGFHIPRYVENFVDAARGLMPLQTVSRQNVDPRFITVGTALGEERMTTALDTGNRVVKLGAHPVGTDPERIRSALA 267 (487)
T ss_pred cCCeEEeCCHHHHHHHHHHHHHHhCCccccccccccccccccccccccccccceeECCEEEEEEEEECEecHHHHHHHhc
Confidence 9999999988776543332221100000000 000 00000111112 25788999999998855321
Q ss_pred ---HHHhhhcchhhhHHhhcCchhhhhhhccccCCCCCEEEEEecccCCCChHHHHHHHHHhHccCCC----eEEEEEeC
Q 003947 515 ---EKRRLKHFHSEIEELLYSPVENKEHLCVLKDSSKPILFTMARLDRVKNLTGLVEWYGKNAKLREL----VNLVVVGG 587 (784)
Q Consensus 515 ---~~~rl~~~~~~~~~~l~~~~~~~~~~gll~~~~k~iIl~vGRL~~~Kgi~~LieA~~~l~~~~~~----v~LvIVG~ 587 (784)
...+.. ..++++| ++++|++++|++..||+...++|+.++.+.+|+ +.|+++|.
T Consensus 268 ~~~~~~~~~--------------~lr~~~~-----~~kiIl~VDRLDy~KGI~~kl~Afe~~L~~~Pe~~gkv~Lvqi~~ 328 (487)
T TIGR02398 268 AASIREMME--------------RIRSELA-----GVKLILSAERVDYTKGILEKLNAYERLLERRPELLGKVTLVTACV 328 (487)
T ss_pred CchHHHHHH--------------HHHHHcC-----CceEEEEecccccccCHHHHHHHHHHHHHhCccccCceEEEEEeC
Confidence 111111 1223333 678999999999999999999999999877775 79999987
Q ss_pred CCCCCcccHHHHHHHHHHHHHHHhc-------CCCCcEEEccCcCCcCChhHHHHHHHccccEEEeCCCCCCCcHHHHHH
Q 003947 588 DRRKESKDLEEQAEMKKMYGLIDTY-------KLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEA 660 (784)
Q Consensus 588 g~~~~s~d~ee~~~~~~l~~li~~l-------~L~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEA 660 (784)
... +..+++.+..+++++++.+. +..+-+.+.+ .++.+++..+|+ .||+++.+|..||++++..|+
T Consensus 329 psr--~~v~~y~~l~~~v~~~v~~IN~~fg~~~~~pv~~~~~----~v~~~el~alYr-~ADV~lvT~lrDGmNLVa~Ey 401 (487)
T TIGR02398 329 PAA--SGMTIYDELQGQIEQAVGRINGRFARIGWTPLQFFTR----SLPYEEVSAWFA-MADVMWITPLRDGLNLVAKEY 401 (487)
T ss_pred CCc--ccchHHHHHHHHHHHHHHHHhhccCCCCCccEEEEcC----CCCHHHHHHHHH-hCCEEEECccccccCcchhhH
Confidence 754 22344555666777777765 4445566666 788999999999 499999999999999999999
Q ss_pred HHcCC----cEEEcCccccccccccCceEEEECCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHH
Q 003947 661 MTCGL----PTFATCNGGPAEIIVHGKSGFHIDPYKGDQATGILVDFFEKCKVDPGHWDEISQGGLKRIQEKYTWKIYSE 736 (784)
Q Consensus 661 MA~Gl----PVIaT~~GG~~EiI~dg~~G~li~p~d~e~lAe~I~~~l~~ll~dp~~~~~m~~~a~~~v~~~ytw~~~a~ 736 (784)
|||+. |+|.|..+|.++.+ ..+++++|.|++++|++|.++++ ..++.+++--+..++++ .++|....++
T Consensus 402 va~~~~~~GvLILSefaGaa~~l---~~AllVNP~d~~~~A~ai~~AL~---m~~~Er~~R~~~l~~~v-~~~d~~~W~~ 474 (487)
T TIGR02398 402 VAAQGLLDGVLVLSEFAGAAVEL---KGALLTNPYDPVRMDETIYVALA---MPKAEQQARMREMFDAV-NYYDVQRWAD 474 (487)
T ss_pred HhhhcCCCCCEEEeccccchhhc---CCCEEECCCCHHHHHHHHHHHHc---CCHHHHHHHHHHHHHHH-hhCCHHHHHH
Confidence 99999 99999999998776 24899999999999999997663 56666666666677776 8889888888
Q ss_pred HHHHH
Q 003947 737 RLLNL 741 (784)
Q Consensus 737 ~ll~l 741 (784)
.++.-
T Consensus 475 ~fl~~ 479 (487)
T TIGR02398 475 EFLAA 479 (487)
T ss_pred HHHHH
Confidence 87754
No 87
>TIGR00236 wecB UDP-N-acetylglucosamine 2-epimerase. Epimerase activity was also demonstrated in a bifunctional rat enzyme, for which the N-terminal domain appears to be orthologous. The set of proteins found above the suggested cutoff includes E. coli WecB in one of two deeply branched clusters and the rat UDP-N-acetylglucosamine 2-epimerase domain in the other.
Probab=99.79 E-value=4.8e-18 Score=188.73 Aligned_cols=276 Identities=12% Similarity=0.060 Sum_probs=178.5
Q ss_pred CCCceEEEEcCCC-hhHHHHHHHHhCCCcEEEEecCCcccCCCCCcchhhhccccccccchhhhhHHHhcccCEEEecCh
Q 003947 381 QCKPDLIIGNYSD-GNIVASLLAHKLDVTQCTIAHALELTKYPDSDINWKKLDDKYHFSCQFTADLFAMNRTDFIITSTF 459 (784)
Q Consensus 381 ~~~pDIIh~~~~~-~~lva~llar~~gvp~V~t~H~l~~~k~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~ 459 (784)
..+||+||+|... ..+.+.++++.+|+|++.+-+++.... .. ..+.... . .....+.||.++++|+
T Consensus 84 ~~~pDiv~~~gd~~~~la~a~aa~~~~ipv~h~~~g~~s~~-----~~-~~~~~~~---~----r~~~~~~ad~~~~~s~ 150 (365)
T TIGR00236 84 EEKPDIVLVQGDTTTTLAGALAAFYLQIPVGHVEAGLRTGD-----RY-SPMPEEI---N----RQLTGHIADLHFAPTE 150 (365)
T ss_pred HcCCCEEEEeCCchHHHHHHHHHHHhCCCEEEEeCCCCcCC-----CC-CCCccHH---H----HHHHHHHHHhccCCCH
Confidence 3489999999643 467788999999999886655431110 00 0000000 0 0112335899999998
Q ss_pred HhHhhccccccccccccccccccceeeecCCCCCCCceEEecCCCCCCCCCCCcHHHHhhhcchhhhHHhhcCchhhhhh
Q 003947 460 QEIAGSKDTVGQYESHTAFSLPGLYRVVNGIDAFDPKFNIVSPGADMTIYFPYMEEKRRLKHFHSEIEELLYSPVENKEH 539 (784)
Q Consensus 460 ~~~~~~~~~vgqYe~~~~f~~p~l~~~~~gi~~f~~k~~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~ 539 (784)
..++.+. ..|++ +.++.+++||+....+.+..... ....++.
T Consensus 151 ~~~~~l~--------------------~~G~~--~~~I~vign~~~d~~~~~~~~~~----------------~~~~~~~ 192 (365)
T TIGR00236 151 QAKDNLL--------------------RENVK--ADSIFVTGNTVIDALLTNVEIAY----------------SSPVLSE 192 (365)
T ss_pred HHHHHHH--------------------HcCCC--cccEEEeCChHHHHHHHHHhhcc----------------chhHHHh
Confidence 8776321 12555 77999999996322211110000 0011122
Q ss_pred hccccCCCCCEEEEEe-ccc-CCCChHHHHHHHHHhHccCCCeEEEEEeCCCCCCcccHHHHHHHHHHHHHHHhcCCCCc
Q 003947 540 LCVLKDSSKPILFTMA-RLD-RVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYGLIDTYKLNGQ 617 (784)
Q Consensus 540 ~gll~~~~k~iIl~vG-RL~-~~Kgi~~LieA~~~l~~~~~~v~LvIVG~g~~~~s~d~ee~~~~~~l~~li~~l~L~~~ 617 (784)
++ .+++++++.+ |.. ..||+..+++|+.++.+..++++++++|++.. . ..+ .+.+.++..++
T Consensus 193 ~~----~~~~~vl~~~hr~~~~~k~~~~ll~a~~~l~~~~~~~~~vi~~~~~~------~---~~~---~~~~~~~~~~~ 256 (365)
T TIGR00236 193 FG----EDKRYILLTLHRRENVGEPLENIFKAIREIVEEFEDVQIVYPVHLNP------V---VRE---PLHKHLGDSKR 256 (365)
T ss_pred cC----CCCCEEEEecCchhhhhhHHHHHHHHHHHHHHHCCCCEEEEECCCCh------H---HHH---HHHHHhCCCCC
Confidence 33 1334555544 542 45899999999999877678899999865422 1 111 13344456678
Q ss_pred EEEccCcCCcCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEc-CccccccccccCceEEEECCCCHHHH
Q 003947 618 FRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFAT-CNGGPAEIIVHGKSGFHIDPYKGDQA 696 (784)
Q Consensus 618 V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMA~GlPVIaT-~~GG~~EiI~dg~~G~li~p~d~e~l 696 (784)
|.|+| .+...++..++++ +|+++.+| |..++|||+||+|||++ +.|+..|++.+| +|+++ +.|++++
T Consensus 257 v~~~~----~~~~~~~~~~l~~-ad~vv~~S-----g~~~~EA~a~g~PvI~~~~~~~~~e~~~~g-~~~lv-~~d~~~i 324 (365)
T TIGR00236 257 VHLIE----PLEYLDFLNLAAN-SHLILTDS-----GGVQEEAPSLGKPVLVLRDTTERPETVEAG-TNKLV-GTDKENI 324 (365)
T ss_pred EEEEC----CCChHHHHHHHHh-CCEEEECC-----hhHHHHHHHcCCCEEECCCCCCChHHHhcC-ceEEe-CCCHHHH
Confidence 99998 5667788888886 99999887 66789999999999996 778888998877 55666 4789999
Q ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHH
Q 003947 697 TGILVDFFEKCKVDPGHWDEISQGGLKRIQEKYTWKIYSERLLN 740 (784)
Q Consensus 697 Ae~I~~~l~~ll~dp~~~~~m~~~a~~~v~~~ytw~~~a~~ll~ 740 (784)
+++|.+ +++||+.+++|++++..+- +..+++++++.+.+
T Consensus 325 ~~ai~~----ll~~~~~~~~~~~~~~~~g-~~~a~~ri~~~l~~ 363 (365)
T TIGR00236 325 TKAAKR----LLTDPDEYKKMSNASNPYG-DGEASERIVEELLN 363 (365)
T ss_pred HHHHHH----HHhChHHHHHhhhcCCCCc-CchHHHHHHHHHHh
Confidence 999974 4579999998887663322 34556666655544
No 88
>PRK09814 beta-1,6-galactofuranosyltransferase; Provisional
Probab=99.78 E-value=2e-17 Score=182.00 Aligned_cols=246 Identities=15% Similarity=0.152 Sum_probs=166.4
Q ss_pred CCc-eEEEEcCCChh---HHHHH--HHHhCCCcEEEEecCCcccCCCCCcchhhhccccccccchhhhhHHHhcccCEEE
Q 003947 382 CKP-DLIIGNYSDGN---IVASL--LAHKLDVTQCTIAHALELTKYPDSDINWKKLDDKYHFSCQFTADLFAMNRTDFII 455 (784)
Q Consensus 382 ~~p-DIIh~~~~~~~---lva~l--lar~~gvp~V~t~H~l~~~k~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~II 455 (784)
-++ |+||.+++... +...+ ..++.++|+|.++|++++...... .+ . ...+...++.||.||
T Consensus 62 ~~~~Dvv~~~~P~~~~~~~~~~~~~~~k~~~~k~i~~ihD~~~~~~~~~---------~~--~--~~~~~~~~~~aD~iI 128 (333)
T PRK09814 62 LKPGDIVIFQFPTWNGFEFDRLFVDKLKKKQVKIIILIHDIEPLRFDSN---------YY--L--MKEEIDMLNLADVLI 128 (333)
T ss_pred CCCCCEEEEECCCCchHHHHHHHHHHHHHcCCEEEEEECCcHHHhcccc---------ch--h--hHHHHHHHHhCCEEE
Confidence 356 99999887542 11222 223447999999999865321100 00 0 123567899999999
Q ss_pred ecChHhHhhccccccccccccccccccceeeecCCCCCCCceEEecCCCCCCCCCCCcHHHHhhhcchhhhHHhhcCchh
Q 003947 456 TSTFQEIAGSKDTVGQYESHTAFSLPGLYRVVNGIDAFDPKFNIVSPGADMTIYFPYMEEKRRLKHFHSEIEELLYSPVE 535 (784)
Q Consensus 456 t~S~~~~~~~~~~vgqYe~~~~f~~p~l~~~~~gi~~f~~k~~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~ 535 (784)
+.|+..++.+++ .|+. ..++.+++++.+.....+.
T Consensus 129 ~~S~~~~~~l~~--------------------~g~~--~~~i~~~~~~~~~~~~~~~----------------------- 163 (333)
T PRK09814 129 VHSKKMKDRLVE--------------------EGLT--TDKIIVQGIFDYLNDIELV----------------------- 163 (333)
T ss_pred ECCHHHHHHHHH--------------------cCCC--cCceEeccccccccccccc-----------------------
Confidence 999988763221 2443 4577777665543211000
Q ss_pred hhhhhccccCCCCCEEEEEecccCCCChHHHHHHHHHhHccCCCeEEEEEeCCCCCCcccHHHHHHHHHHHHHHHhcCCC
Q 003947 536 NKEHLCVLKDSSKPILFTMARLDRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYGLIDTYKLN 615 (784)
Q Consensus 536 ~~~~~gll~~~~k~iIl~vGRL~~~Kgi~~LieA~~~l~~~~~~v~LvIVG~g~~~~s~d~ee~~~~~~l~~li~~l~L~ 615 (784)
.....++.|+|+|++.+.+++. +..++++|+|+|+|+.. + ...
T Consensus 164 -------~~~~~~~~i~yaG~l~k~~~l~----------~~~~~~~l~i~G~g~~~-----------~---------~~~ 206 (333)
T PRK09814 164 -------KTPSFQKKINFAGNLEKSPFLK----------NWSQGIKLTVFGPNPED-----------L---------ENS 206 (333)
T ss_pred -------ccccCCceEEEecChhhchHHH----------hcCCCCeEEEECCCccc-----------c---------ccC
Confidence 0023456899999999543211 12367999999999651 0 345
Q ss_pred CcEEEccCcCCcCChhHHHHHHHccccEEEeCC-C----------CCCCcHHHHHHHHcCCcEEEcCccccccccccCce
Q 003947 616 GQFRWISSQMNRVRNGELYRYICDTKGAFVQPA-L----------YEAFGLTVVEAMTCGLPTFATCNGGPAEIIVHGKS 684 (784)
Q Consensus 616 ~~V~flG~~~~~v~~~el~~~la~aadvfV~PS-~----------~E~fGltvlEAMA~GlPVIaT~~GG~~EiI~dg~~ 684 (784)
++|.|+| .++.+++..+++. |+.+.+. . .-++|.++.|+||||+|||+++.++..++|+++.+
T Consensus 207 ~~V~f~G----~~~~eel~~~l~~--~~gLv~~~~~~~~~~~~y~~~~~P~K~~~ymA~G~PVI~~~~~~~~~~V~~~~~ 280 (333)
T PRK09814 207 ANISYKG----WFDPEELPNELSK--GFGLVWDGDTNDGEYGEYYKYNNPHKLSLYLAAGLPVIVWSKAAIADFIVENGL 280 (333)
T ss_pred CCeEEec----CCCHHHHHHHHhc--CcCeEEcCCCCCccchhhhhccchHHHHHHHHCCCCEEECCCccHHHHHHhCCc
Confidence 7899999 7888999999985 4333322 1 13578899999999999999999999999999999
Q ss_pred EEEECCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHH
Q 003947 685 GFHIDPYKGDQATGILVDFFEKCKVDPGHWDEISQGGLKRIQEKYTWKIYSER 737 (784)
Q Consensus 685 G~li~p~d~e~lAe~I~~~l~~ll~dp~~~~~m~~~a~~~v~~~ytw~~~a~~ 737 (784)
|++++ +.++++++|.. .+++.+++|++++++.. +++.-..++++
T Consensus 281 G~~v~--~~~el~~~l~~------~~~~~~~~m~~n~~~~~-~~~~~g~~~~~ 324 (333)
T PRK09814 281 GFVVD--SLEELPEIIDN------ITEEEYQEMVENVKKIS-KLLRNGYFTKK 324 (333)
T ss_pred eEEeC--CHHHHHHHHHh------cCHHHHHHHHHHHHHHH-HHHhcchhHHH
Confidence 99997 67888888863 24677899999999877 55554444433
No 89
>PRK00025 lpxB lipid-A-disaccharide synthase; Reviewed
Probab=99.77 E-value=4.6e-17 Score=181.38 Aligned_cols=250 Identities=12% Similarity=0.096 Sum_probs=160.1
Q ss_pred CCCceEEEEcCCCh-hHHHHHHHHhCCCcEEEEecCCcccCCCCCcchhhhccccccccchhhhhHHHhcccCEEEecCh
Q 003947 381 QCKPDLIIGNYSDG-NIVASLLAHKLDVTQCTIAHALELTKYPDSDINWKKLDDKYHFSCQFTADLFAMNRTDFIITSTF 459 (784)
Q Consensus 381 ~~~pDIIh~~~~~~-~lva~llar~~gvp~V~t~H~l~~~k~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~ 459 (784)
..+||+||++.+.+ .......+++.++|++...+.. .|...... . ....+.+|.++++++
T Consensus 83 ~~kPdivi~~~~~~~~~~~a~~a~~~~ip~i~~~~~~----------~~~~~~~~--------~-~~~~~~~d~i~~~~~ 143 (380)
T PRK00025 83 AEPPDVFIGIDAPDFNLRLEKKLRKAGIPTIHYVSPS----------VWAWRQGR--------A-FKIAKATDHVLALFP 143 (380)
T ss_pred HcCCCEEEEeCCCCCCHHHHHHHHHCCCCEEEEeCCc----------hhhcCchH--------H-HHHHHHHhhheeCCc
Confidence 45899999876532 2222344566799988654431 11100000 0 113567899999997
Q ss_pred HhHhhccccccccccccccccccceeeecCCCCCCCceEEecCCCCCCCCCCCcHHHHhhhcchhhhHHhhcCchhhhhh
Q 003947 460 QEIAGSKDTVGQYESHTAFSLPGLYRVVNGIDAFDPKFNIVSPGADMTIYFPYMEEKRRLKHFHSEIEELLYSPVENKEH 539 (784)
Q Consensus 460 ~~~~~~~~~vgqYe~~~~f~~p~l~~~~~gi~~f~~k~~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~ 539 (784)
...+... ..|+ ++.++.|.+......+.... +.+++
T Consensus 144 ~~~~~~~--------------------~~g~-----~~~~~G~p~~~~~~~~~~~~-------------------~~~~~ 179 (380)
T PRK00025 144 FEAAFYD--------------------KLGV-----PVTFVGHPLADAIPLLPDRA-------------------AARAR 179 (380)
T ss_pred cCHHHHH--------------------hcCC-----CeEEECcCHHHhcccccChH-------------------HHHHH
Confidence 6554110 0121 35556655433211111111 12345
Q ss_pred hccccCCCCCEEE-EEe-cccCC-CChHHHHHHHHHhHccCCCeEEEEEeCCCCCCcccHHHHHHHHHHHHHHHhc-CCC
Q 003947 540 LCVLKDSSKPILF-TMA-RLDRV-KNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYGLIDTY-KLN 615 (784)
Q Consensus 540 ~gll~~~~k~iIl-~vG-RL~~~-Kgi~~LieA~~~l~~~~~~v~LvIVG~g~~~~s~d~ee~~~~~~l~~li~~l-~L~ 615 (784)
+|+ ++++++|+ +.| |.... ++++.+++++..+.+..++++++++|+++. ..+.+++.++++ ++.
T Consensus 180 l~~--~~~~~~il~~~gsr~~~~~~~~~~l~~a~~~l~~~~~~~~~ii~~~~~~----------~~~~~~~~~~~~~~~~ 247 (380)
T PRK00025 180 LGL--DPDARVLALLPGSRGQEIKRLLPPFLKAAQLLQQRYPDLRFVLPLVNPK----------RREQIEEALAEYAGLE 247 (380)
T ss_pred cCC--CCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHhCCCeEEEEecCChh----------hHHHHHHHHhhcCCCC
Confidence 665 45666654 444 44443 457899999999887778899999987422 124455666666 553
Q ss_pred CcEEEccCcCCcCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEc-----------------Cccccccc
Q 003947 616 GQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFAT-----------------CNGGPAEI 678 (784)
Q Consensus 616 ~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMA~GlPVIaT-----------------~~GG~~Ei 678 (784)
+.+.. +++..+|+. +|++|.+| |.+.+|||+||+|+|++ +.++++++
T Consensus 248 --v~~~~--------~~~~~~~~~-aDl~v~~s-----G~~~lEa~a~G~PvI~~~~~~~~~~~~~~~~~~~~~~~l~~~ 311 (380)
T PRK00025 248 --VTLLD--------GQKREAMAA-ADAALAAS-----GTVTLELALLKVPMVVGYKVSPLTFWIAKRLVKVPYVSLPNL 311 (380)
T ss_pred --eEEEc--------ccHHHHHHh-CCEEEECc-----cHHHHHHHHhCCCEEEEEccCHHHHHHHHHHHcCCeeehHHH
Confidence 54442 368888884 99999997 88889999999999987 56777888
Q ss_pred cccCc--eEEEECCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHH
Q 003947 679 IVHGK--SGFHIDPYKGDQATGILVDFFEKCKVDPGHWDEISQGGLKRI 725 (784)
Q Consensus 679 I~dg~--~G~li~p~d~e~lAe~I~~~l~~ll~dp~~~~~m~~~a~~~v 725 (784)
+.++. .+++.+..|++++++++.+ +++|++.+++|++++.+..
T Consensus 312 ~~~~~~~~~~~~~~~~~~~l~~~i~~----ll~~~~~~~~~~~~~~~~~ 356 (380)
T PRK00025 312 LAGRELVPELLQEEATPEKLARALLP----LLADGARRQALLEGFTELH 356 (380)
T ss_pred hcCCCcchhhcCCCCCHHHHHHHHHH----HhcCHHHHHHHHHHHHHHH
Confidence 87753 5577778899999999974 5589999999999875554
No 90
>KOG1387 consensus Glycosyltransferase [Cell wall/membrane/envelope biogenesis]
Probab=99.75 E-value=6.6e-16 Score=162.44 Aligned_cols=389 Identities=16% Similarity=0.234 Sum_probs=247.9
Q ss_pred eEEEEEccCccccccCccCCCCcccchhhhHHHHHHHHHHHHHHHHHcCCCcccceEEEecCCCCCCCC---CcCcceee
Q 003947 255 FNVVIFTPHGYFAQDNVLGYPDTGGQVVYILDQVRALENEMLLRIKQQGLDITPRILIITRLLPDAVGT---TCGQRVEK 331 (784)
Q Consensus 255 mkI~ivs~h~~~~~~~~lg~p~tGG~~vyv~d~~raLe~eLa~~L~~~GheV~~~i~VvTr~~~~~~g~---~~~~~~e~ 331 (784)
..++++.|+..- .||-+.+..-.+|++.+. -..+ +++|+|..++..... ...+..+-
T Consensus 44 ktvgfFHPYCNA----------GGGGErVLW~Avr~~q~k------~~n~----~~viYsGD~n~t~~~IL~k~k~~F~i 103 (465)
T KOG1387|consen 44 KTVGFFHPYCNA----------GGGGERVLWKAVRITQRK------FPNN----VIVIYSGDFNVTPENILNKVKNKFDI 103 (465)
T ss_pred eEEEEecccccC----------CCCcceehhHHHHHHHHh------CCCc----eEEEEeCCCCCCHHHHHHHHHHhcCc
Confidence 568888777763 377888888888876221 1111 244666554221100 00011122
Q ss_pred ecCcCCeEEEEccCCCCcccccccccccCChhhHHHHHHHHHHHHHH---HcCCCceEEEEcCCChhHHHHHHHHhCCCc
Q 003947 332 VYGTKYSDILRVPFRTEEGIVRKWISRFEVWPYLETFTEDVATEIIQ---ELQCKPDLIIGNYSDGNIVASLLAHKLDVT 408 (784)
Q Consensus 332 v~~~~~v~IlrvP~~~~~~~~~~~isr~~l~~yl~~f~~~~~~~i~~---~~~~~pDIIh~~~~~~~lva~llar~~gvp 408 (784)
..+.+++..+.+..+. |++ ..-|++..-..+.+..-++. ..+..|||.+-...-+ +.-...++..++|
T Consensus 104 dlDs~nI~Fi~Lk~R~-------lVe-a~~~~hfTllgQaigsmIl~~Eai~r~~Pdi~IDtMGY~-fs~p~~r~l~~~~ 174 (465)
T KOG1387|consen 104 DLDSDNIFFIYLKLRY-------LVE-ASTWKHFTLLGQAIGSMILAFEAIIRFPPDIFIDTMGYP-FSYPIFRRLRRIP 174 (465)
T ss_pred eecccceEEEEEEeee-------eee-cccccceehHHHHHHHHHHHHHHHHhCCchheEecCCCc-chhHHHHHHccCc
Confidence 2233455555544332 333 33455544444444443332 3367899988533222 2223345567899
Q ss_pred EEEEecCCccc-CC-------CCC-cchhhhccccccccchhhhhHHHhcccCEEEecChHhHhhccccccccccccccc
Q 003947 409 QCTIAHALELT-KY-------PDS-DINWKKLDDKYHFSCQFTADLFAMNRTDFIITSTFQEIAGSKDTVGQYESHTAFS 479 (784)
Q Consensus 409 ~V~t~H~l~~~-k~-------~~s-~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~~~~~~~~~~vgqYe~~~~f~ 479 (784)
++..+|-.--. +. +.+ -+.|.++. .|+...+. -..+=..||.++++|......++..|+
T Consensus 175 V~aYvHYP~iS~DML~~l~qrq~s~~l~~~Kla-Y~rlFa~l--Y~~~G~~ad~vm~NssWT~nHI~qiW~--------- 242 (465)
T KOG1387|consen 175 VVAYVHYPTISTDMLKKLFQRQKSGILVWGKLA-YWRLFALL--YQSAGSKADIVMTNSSWTNNHIKQIWQ--------- 242 (465)
T ss_pred eEEEEecccccHHHHHHHHhhhhcchhhhHHHH-HHHHHHHH--HHhccccceEEEecchhhHHHHHHHhh---------
Confidence 99999942211 10 111 12222211 12111111 123456799999999776554444432
Q ss_pred cccceeeecCCCCCCCceEEecCCCCCCCCCCCcHHHHhhhcchhhhHHhhcCchhhhhhhccccCCCCCEEEEEecccC
Q 003947 480 LPGLYRVVNGIDAFDPKFNIVSPGADMTIYFPYMEEKRRLKHFHSEIEELLYSPVENKEHLCVLKDSSKPILFTMARLDR 559 (784)
Q Consensus 480 ~p~l~~~~~gi~~f~~k~~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~~gll~~~~k~iIl~vGRL~~ 559 (784)
..+..+|+|..+++.... ..+- ...+.+.++++|.+.|
T Consensus 243 --------------~~~~~iVyPPC~~e~lks---------------------------~~~t-e~~r~~~ll~l~Q~RP 280 (465)
T KOG1387|consen 243 --------------SNTCSIVYPPCSTEDLKS---------------------------KFGT-EGERENQLLSLAQFRP 280 (465)
T ss_pred --------------ccceeEEcCCCCHHHHHH---------------------------Hhcc-cCCcceEEEEEeecCc
Confidence 346778888766541110 1111 2456788999999999
Q ss_pred CCChHHHHHHHHHhHc------cCCCeEEEEEeCCCCCCcccHHHHHHHHHHHHHHHhcCCCCcEEEccCcCCcCChhHH
Q 003947 560 VKNLTGLVEWYGKNAK------LRELVNLVVVGGDRRKESKDLEEQAEMKKMYGLIDTYKLNGQFRWISSQMNRVRNGEL 633 (784)
Q Consensus 560 ~Kgi~~LieA~~~l~~------~~~~v~LvIVG~g~~~~s~d~ee~~~~~~l~~li~~l~L~~~V~flG~~~~~v~~~el 633 (784)
.||.. +++.++-... ..+.++|++||+... .+..+..+.|+++++++.++++|.|-- .+|.+++
T Consensus 281 EKnH~-~Lql~Al~~~~~pl~a~~~~iKL~ivGScRn-----eeD~ervk~Lkd~a~~L~i~~~v~F~~----N~Py~~l 350 (465)
T KOG1387|consen 281 EKNHK-ILQLFALYLKNEPLEASVSPIKLIIVGSCRN-----EEDEERVKSLKDLAEELKIPKHVQFEK----NVPYEKL 350 (465)
T ss_pred ccccH-HHHHHHHHHhcCchhhccCCceEEEEeccCC-----hhhHHHHHHHHHHHHhcCCccceEEEe----cCCHHHH
Confidence 99999 5555443322 235689999999854 244566788999999999999999987 7899999
Q ss_pred HHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcCcccc-cccccc--C-ceEEEECCCCHHHHHHHHHHHHHHhcC
Q 003947 634 YRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCNGGP-AEIIVH--G-KSGFHIDPYKGDQATGILVDFFEKCKV 709 (784)
Q Consensus 634 ~~~la~aadvfV~PS~~E~fGltvlEAMA~GlPVIaT~~GG~-~EiI~d--g-~~G~li~p~d~e~lAe~I~~~l~~ll~ 709 (784)
..++.. |.+.|..-..|-||+.++|+||+|+-.|+.+.||+ -+|+.+ | .+||+. .+.++.|+++.++.. .
T Consensus 351 v~lL~~-a~iGvh~MwNEHFGIsVVEyMAAGlIpi~h~SgGP~lDIV~~~~G~~tGFla--~t~~EYaE~iLkIv~---~ 424 (465)
T KOG1387|consen 351 VELLGK-ATIGVHTMWNEHFGISVVEYMAAGLIPIVHNSGGPLLDIVTPWDGETTGFLA--PTDEEYAEAILKIVK---L 424 (465)
T ss_pred HHHhcc-ceeehhhhhhhhcchhHHHHHhcCceEEEeCCCCCceeeeeccCCccceeec--CChHHHHHHHHHHHH---c
Confidence 999996 88999999999999999999999999999999998 466653 3 579987 366889999997764 7
Q ss_pred CHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Q 003947 710 DPGHWDEISQGGLKRIQEKYTWKIYSERLLNLSG 743 (784)
Q Consensus 710 dp~~~~~m~~~a~~~v~~~ytw~~~a~~ll~ly~ 743 (784)
|++.+..|+++||..+ .+|+=....+.+.+.+.
T Consensus 425 ~~~~r~~~r~~AR~s~-~RFsE~~F~kd~~~~i~ 457 (465)
T KOG1387|consen 425 NYDERNMMRRNARKSL-ARFGELKFDKDWENPIC 457 (465)
T ss_pred CHHHHHHHHHHHHHHH-HHhhHHHHHHhHhHHHH
Confidence 8888999999999987 88887777777665543
No 91
>PLN03064 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=99.74 E-value=3.9e-16 Score=188.18 Aligned_cols=325 Identities=12% Similarity=0.128 Sum_probs=215.7
Q ss_pred HHHHHHHHHHHcCCCceEEEEcCCChhHHHHHHHHhC-CCcEEEEecCCcccCCCCCcchhhhccccccccchhhhhHHH
Q 003947 369 TEDVATEIIQELQCKPDLIIGNYSDGNIVASLLAHKL-DVTQCTIAHALELTKYPDSDINWKKLDDKYHFSCQFTADLFA 447 (784)
Q Consensus 369 ~~~~~~~i~~~~~~~pDIIh~~~~~~~lva~llar~~-gvp~V~t~H~l~~~k~~~s~~~~~~~~~~y~~~~~~~~e~~a 447 (784)
.+..+..+.+..+ .=|+|.+|.....+++.++.++. ..++.+..|..++ .+++ ++.+.+...-+..
T Consensus 218 N~~FA~~i~~~~~-~gD~VWVHDYHL~LlP~~LR~~~p~~~IGfFlHiPFP----s~Ei--------fr~LP~r~elL~g 284 (934)
T PLN03064 218 NQMFADVVNEHYE-EGDVVWCHDYHLMFLPKCLKEYNSNMKVGWFLHTPFP----SSEI--------HRTLPSRSELLRS 284 (934)
T ss_pred HHHHHHHHHHhcC-CCCEEEEecchhhHHHHHHHHhCCCCcEEEEecCCCC----ChHH--------HhhCCcHHHHHHH
Confidence 3344445554432 34899999999888888887764 5678888887543 2221 2222222233457
Q ss_pred hcccCEEEecChHhHhhccccccccccccccccccceeeecCCCCCC--CceEEecCCCCCCCCCCCcH---HHHhhhcc
Q 003947 448 MNRTDFIITSTFQEIAGSKDTVGQYESHTAFSLPGLYRVVNGIDAFD--PKFNIVSPGADMTIYFPYME---EKRRLKHF 522 (784)
Q Consensus 448 ~~~AD~IIt~S~~~~~~~~~~vgqYe~~~~f~~p~l~~~~~gi~~f~--~k~~VIpnGvD~~~f~p~~~---~~~rl~~~ 522 (784)
|-.||.|=+.|+..+....+.....- ++-....++.... .++.+.|-|||.+.|..... ...+..
T Consensus 285 lL~aDlIGFqT~~y~rhFl~~c~rlL--------g~~~~~~~v~~~Gr~v~V~~~PiGID~~~f~~~~~~~~v~~~~~-- 354 (934)
T PLN03064 285 VLAADLVGFHTYDYARHFVSACTRIL--------GLEGTPEGVEDQGRLTRVAAFPIGIDSDRFIRALETPQVQQHIK-- 354 (934)
T ss_pred HhcCCeEEeCCHHHHHHHHHHHHHHh--------CccccCCeEEECCEEEEEEEEeCEEcHHHHHHHhcChhHHHHHH--
Confidence 88999999999877653332211100 0000011222112 14667899999988764321 111111
Q ss_pred hhhhHHhhcCchhhhhhhccccCCCCCEEEEEecccCCCChHHHHHHHHHhHccCCCeE--EEEEeCCCCCCcccHHHHH
Q 003947 523 HSEIEELLYSPVENKEHLCVLKDSSKPILFTMARLDRVKNLTGLVEWYGKNAKLRELVN--LVVVGGDRRKESKDLEEQA 600 (784)
Q Consensus 523 ~~~~~~~l~~~~~~~~~~gll~~~~k~iIl~vGRL~~~Kgi~~LieA~~~l~~~~~~v~--LvIVG~g~~~~s~d~ee~~ 600 (784)
..++++ .++.+|++++|++..||+...+.||.++.+.+|+++ ++++--..++.+..+++.+
T Consensus 355 ------------~lr~~~-----~g~kiIlgVDRLD~~KGI~~kL~AfE~fL~~~Pe~r~kVVLvQIa~psr~~v~eY~~ 417 (934)
T PLN03064 355 ------------ELKERF-----AGRKVMLGVDRLDMIKGIPQKILAFEKFLEENPEWRDKVVLLQIAVPTRTDVPEYQK 417 (934)
T ss_pred ------------HHHHHh-----CCceEEEEeeccccccCHHHHHHHHHHHHHhCccccCCEEEEEEcCCCCCCcHHHHH
Confidence 112222 357799999999999999999999999877777653 4444211221122234444
Q ss_pred HHHHHHHHHHhcCC-CCc-----EEEccCcCCcCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCC----cEEEc
Q 003947 601 EMKKMYGLIDTYKL-NGQ-----FRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGL----PTFAT 670 (784)
Q Consensus 601 ~~~~l~~li~~l~L-~~~-----V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMA~Gl----PVIaT 670 (784)
...++.+++.+.+- .+. |.++. ..++.+++..+|+. +|+|++||..|||+++..|||+|+. ++|.|
T Consensus 418 l~~~V~~~V~rIN~~fg~~~w~Pv~~~~---~~l~~eeL~AlY~~-ADV~lvTslrDGmNLva~Eyva~~~~~~GvLILS 493 (934)
T PLN03064 418 LTSQVHEIVGRINGRFGTLTAVPIHHLD---RSLDFHALCALYAV-TDVALVTSLRDGMNLVSYEFVACQDSKKGVLILS 493 (934)
T ss_pred HHHHHHHHHHHHhhhccCCCcceEEEec---cCCCHHHHHHHHHh-CCEEEeCccccccCchHHHHHHhhcCCCCCeEEe
Confidence 44555555554431 122 44443 24788999999994 9999999999999999999999954 44559
Q ss_pred CccccccccccCceEEEECCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Q 003947 671 CNGGPAEIIVHGKSGFHIDPYKGDQATGILVDFFEKCKVDPGHWDEISQGGLKRIQEKYTWKIYSERLLNLSG 743 (784)
Q Consensus 671 ~~GG~~EiI~dg~~G~li~p~d~e~lAe~I~~~l~~ll~dp~~~~~m~~~a~~~v~~~ytw~~~a~~ll~ly~ 743 (784)
.++|.++.+ +..+++|+|.|.+++|++|.++++ .+++.++++.+++++++ ..+||...++.+++-..
T Consensus 494 EfaGaa~~L--~~~AllVNP~D~~~vA~AI~~AL~---M~~~Er~~r~~~~~~~V-~~~d~~~Wa~~fl~~L~ 560 (934)
T PLN03064 494 EFAGAAQSL--GAGAILVNPWNITEVAASIAQALN---MPEEEREKRHRHNFMHV-TTHTAQEWAETFVSELN 560 (934)
T ss_pred CCCchHHHh--CCceEEECCCCHHHHHHHHHHHHh---CCHHHHHHHHHHHHhhc-ccCCHHHHHHHHHHHHH
Confidence 999999888 446999999999999999997653 58999999999999998 88999999999766443
No 92
>cd03786 GT1_UDP-GlcNAc_2-Epimerase Bacterial members of the UDP-N-Acetylglucosamine (GlcNAc) 2-Epimerase family are known to catalyze the reversible interconversion of UDP-GlcNAc and UDP-N-acetylmannosamine (UDP-ManNAc). The enzyme serves to produce an activated form of ManNAc residues (UDP-ManNAc) for use in the biosynthesis of a variety of cell surface polysaccharides; The mammalian enzyme is bifunctional, catalyzing both the inversion of stereochemistry at C-2 and the hydrolysis of the UDP-sugar linkage to generate free ManNAc. It also catalyzes the phosphorylation of ManNAc to generate ManNAc 6-phosphate, a precursor to salic acids. In mammals, sialic acids are found at the termini of oligosaccharides in a large variety of cell surface glycoconjugates and are key mediators of cell-cell recognition events. Mutations in human members of this family have been associated with Sialuria, a rare disease caused by the disorders of sialic acid metabolism. This family belongs to the GT-B st
Probab=99.73 E-value=1.1e-16 Score=176.84 Aligned_cols=251 Identities=16% Similarity=0.113 Sum_probs=165.2
Q ss_pred CCceEEEEcCCCh-hHHHHHHHHhCCCcEEEEecCCcccCCCCCcchhhhccccccccchhhhhHHHhcccCEEEecChH
Q 003947 382 CKPDLIIGNYSDG-NIVASLLAHKLDVTQCTIAHALELTKYPDSDINWKKLDDKYHFSCQFTADLFAMNRTDFIITSTFQ 460 (784)
Q Consensus 382 ~~pDIIh~~~~~~-~lva~llar~~gvp~V~t~H~l~~~k~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~~ 460 (784)
.+||+||+|.... .+.+.++++..++|++.+.|+... +..+. .|. .. .....+.+|.++++|+.
T Consensus 87 ~~pDvV~~~g~~~~~~~~~~aa~~~~iPvv~~~~g~~s--~~~~~-~~~----~~--------r~~~~~~ad~~~~~s~~ 151 (363)
T cd03786 87 EKPDLVLVLGDTNETLAAALAAFKLGIPVAHVEAGLRS--FDRGM-PDE----EN--------RHAIDKLSDLHFAPTEE 151 (363)
T ss_pred hCCCEEEEeCCchHHHHHHHHHHHcCCCEEEEeccccc--CCCCC-Cch----HH--------HHHHHHHhhhccCCCHH
Confidence 4899999996543 567788888899998877665422 10000 010 00 11235678999999988
Q ss_pred hHhhccccccccccccccccccceeeecCCCCCCCceEEecCCC-CCCCCCCCcHHHHhhhcchhhhHHhhcCchhhhhh
Q 003947 461 EIAGSKDTVGQYESHTAFSLPGLYRVVNGIDAFDPKFNIVSPGA-DMTIYFPYMEEKRRLKHFHSEIEELLYSPVENKEH 539 (784)
Q Consensus 461 ~~~~~~~~vgqYe~~~~f~~p~l~~~~~gi~~f~~k~~VIpnGv-D~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~ 539 (784)
..+.+ ...|++ ..++.+++|++ |...+.+...... ..++.
T Consensus 152 ~~~~l--------------------~~~G~~--~~kI~vign~v~d~~~~~~~~~~~~-----------------~~~~~ 192 (363)
T cd03786 152 ARRNL--------------------LQEGEP--PERIFVVGNTMIDALLRLLELAKKE-----------------LILEL 192 (363)
T ss_pred HHHHH--------------------HHcCCC--cccEEEECchHHHHHHHHHHhhccc-----------------hhhhh
Confidence 76521 123555 77899999985 4322211110000 01123
Q ss_pred hccccCCCCCEEEEEecccC---CCChHHHHHHHHHhHccCCCeEEEEEeCCCCCCcccHHHHHHHHHHHHHHHhcCC-C
Q 003947 540 LCVLKDSSKPILFTMARLDR---VKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYGLIDTYKL-N 615 (784)
Q Consensus 540 ~gll~~~~k~iIl~vGRL~~---~Kgi~~LieA~~~l~~~~~~v~LvIVG~g~~~~s~d~ee~~~~~~l~~li~~l~L-~ 615 (784)
+++ ++++.++++.||... .||++.+++++.++.+. ++.+++.|++.. .+.+++.++++++ .
T Consensus 193 ~~~--~~~~~vlv~~~r~~~~~~~k~~~~l~~al~~l~~~--~~~vi~~~~~~~-----------~~~l~~~~~~~~~~~ 257 (363)
T cd03786 193 LGL--LPKKYILVTLHRVENVDDGEQLEEILEALAELAEE--DVPVVFPNHPRT-----------RPRIREAGLEFLGHH 257 (363)
T ss_pred ccc--CCCCEEEEEeCCccccCChHHHHHHHHHHHHHHhc--CCEEEEECCCCh-----------HHHHHHHHHhhccCC
Confidence 454 345567778998875 79999999999988653 466666665532 3456677777776 6
Q ss_pred CcEEEccCcCCcCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcCc-cccccccccCceEEEECCCCHH
Q 003947 616 GQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCN-GGPAEIIVHGKSGFHIDPYKGD 694 (784)
Q Consensus 616 ~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMA~GlPVIaT~~-GG~~EiI~dg~~G~li~p~d~e 694 (784)
++|+|+| .....++..+++. +|++|.||- | ++.|||+||+|+|+++. +...+.+.+| .++.+. .|++
T Consensus 258 ~~v~~~~----~~~~~~~~~l~~~-ad~~v~~Sg----g-i~~Ea~~~g~PvI~~~~~~~~~~~~~~g-~~~~~~-~~~~ 325 (363)
T cd03786 258 PNVLLIS----PLGYLYFLLLLKN-ADLVLTDSG----G-IQEEASFLGVPVLNLRDRTERPETVESG-TNVLVG-TDPE 325 (363)
T ss_pred CCEEEEC----CcCHHHHHHHHHc-CcEEEEcCc----c-HHhhhhhcCCCEEeeCCCCccchhhhee-eEEecC-CCHH
Confidence 7899998 4556788888885 999999984 4 47899999999999964 4466766554 233332 3688
Q ss_pred HHHHHHHHHHHHhcCCHHHHHHH
Q 003947 695 QATGILVDFFEKCKVDPGHWDEI 717 (784)
Q Consensus 695 ~lAe~I~~~l~~ll~dp~~~~~m 717 (784)
+++++|.+ +++++..+.+|
T Consensus 326 ~i~~~i~~----ll~~~~~~~~~ 344 (363)
T cd03786 326 AILAAIEK----LLSDEFAYSLM 344 (363)
T ss_pred HHHHHHHH----HhcCchhhhcC
Confidence 99988874 45788777665
No 93
>cd04299 GT1_Glycogen_Phosphorylase_like This family is most closely related to the oligosaccharide phosphorylase domain family and other unidentified sequences. Oligosaccharide phosphorylase catalyzes the breakdown of oligosaccharides into glucose-1-phosphate units. They are important allosteric enzymes in carbohydrate metabolism. The members of this family are found in bacteria and Archaea.
Probab=99.73 E-value=1e-15 Score=182.13 Aligned_cols=343 Identities=13% Similarity=0.129 Sum_probs=229.8
Q ss_pred HHcCCCceEEEEcCCChhHHHH-----HHHHh----------CCCcEEEEecCCcccC---CCCCc-------------c
Q 003947 378 QELQCKPDLIIGNYSDGNIVAS-----LLAHK----------LDVTQCTIAHALELTK---YPDSD-------------I 426 (784)
Q Consensus 378 ~~~~~~pDIIh~~~~~~~lva~-----llar~----------~gvp~V~t~H~l~~~k---~~~s~-------------~ 426 (784)
+.+..+||+||+|.+.++++.. ++... .+.+.|+|.|++.+.- ++... +
T Consensus 243 r~lg~~pdViH~ND~Haal~~lE~~R~ll~~~g~~~~~A~e~vr~~tvFTtHTpvpqG~d~Fp~~l~~~~~~~~~~~lgl 322 (778)
T cd04299 243 RALGIKPTVYHMNEGHAAFLGLERIRELMAEGGLSFDEALEAVRASTVFTTHTPVPAGHDRFPPDLVERYFGPYARELGL 322 (778)
T ss_pred HHhCCCCeEEEeCCCcHHHHHHHHHHHHHHHcCCCHHHHHHhhCCeEEEecCCchHHHhhhCCHHHHHHHhhHHHHHcCC
Confidence 3345689999999999988777 44321 1356899999975432 22111 1
Q ss_pred hhhhcccccc-c----cchhhhhHHHhcccCEEEecChHhHhhccccccccccccccccccceeeecCCCCCCCceEEec
Q 003947 427 NWKKLDDKYH-F----SCQFTADLFAMNRTDFIITSTFQEIAGSKDTVGQYESHTAFSLPGLYRVVNGIDAFDPKFNIVS 501 (784)
Q Consensus 427 ~~~~~~~~y~-~----~~~~~~e~~a~~~AD~IIt~S~~~~~~~~~~vgqYe~~~~f~~p~l~~~~~gi~~f~~k~~VIp 501 (784)
.+..+..... + ..++..-+.++..|+.|.+||+-.-+-+++.+.. ...|.+....++.-|.
T Consensus 323 ~~~~~~~lg~e~~~~~~~~~nM~~laL~~S~~vNgVS~lHg~vsr~mf~~--------------~~~g~p~~~~~i~~IT 388 (778)
T cd04299 323 SRDRFLALGRENPGDDPEPFNMAVLALRLAQRANGVSRLHGEVSREMFAG--------------LWPGFPVEEVPIGHVT 388 (778)
T ss_pred CHHHHhhhccccccCccCceeHHHHHHHhcCeeeeecHHHHHHHHHHhhh--------------hhccCCcccCceecee
Confidence 1111100000 0 0123344578999999999998653222222111 1123332245789999
Q ss_pred CCCCCCCCC-CCcHHHH-h--------------------------hhcchhhhHHhhcCchhh---------------hh
Q 003947 502 PGADMTIYF-PYMEEKR-R--------------------------LKHFHSEIEELLYSPVEN---------------KE 538 (784)
Q Consensus 502 nGvD~~~f~-p~~~~~~-r--------------------------l~~~~~~~~~~l~~~~~~---------------~~ 538 (784)
|||+...|. |..+.-- + +-+.+....+.|...... -.
T Consensus 389 NGVh~~~W~~P~~~~l~~~~~g~~w~~~~~~~~~~~~~~~i~d~~lw~~K~~~K~~L~~~v~~~~~~~~~~~g~~~~~~~ 468 (778)
T cd04299 389 NGVHVPTWVAPEMRELYDRYLGGDWRERPTDPELWEAVDDIPDEELWEVRQQLRRRLIEFVRRRLRRQWLRRGASAEEIG 468 (778)
T ss_pred CCcchhhhcCHHHHHHHHHhcCcchhhccchHHHHhhhcCCCcHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCchhhhh
Confidence 999998887 4322110 0 000111111111111000 00
Q ss_pred hhccccCCCCCEEEEEecccCCCChHHHHHHHHHhHcc----CCCeEEEEEeCCCCCCcccHHHHHHHHHHHHHHHhcCC
Q 003947 539 HLCVLKDSSKPILFTMARLDRVKNLTGLVEWYGKNAKL----RELVNLVVVGGDRRKESKDLEEQAEMKKMYGLIDTYKL 614 (784)
Q Consensus 539 ~~gll~~~~k~iIl~vGRL~~~Kgi~~LieA~~~l~~~----~~~v~LvIVG~g~~~~s~d~ee~~~~~~l~~li~~l~L 614 (784)
..+..-+++.++|+++.|+..+|+.+.++..+.++.+. ...++||++|.+.+ .|...++.++.+.+++++...
T Consensus 469 ~~~~~ldpd~ltigfarRfa~YKR~~Lil~dl~rl~~il~~~~~pvQ~IfaGKAhP---~d~~gK~iIk~i~~~a~~p~~ 545 (778)
T cd04299 469 EADDVLDPNVLTIGFARRFATYKRATLLLRDPERLKRLLNDPERPVQFIFAGKAHP---ADEPGKELIQEIVEFSRRPEF 545 (778)
T ss_pred hcCCccCCCccEEeeeecchhhhhHHHHHHHHHHHHHHhhCCCCCeEEEEEEecCc---cchHHHHHHHHHHHHHhCcCC
Confidence 12333467888999999999999999999988877542 13599999999876 345567788889999987778
Q ss_pred CCcEEEccCcCCcCChhHHHHHHHccccEEEeCCC--CCCCcHHHHHHHHcCCcEEEcCccccccccccCceEEEECC--
Q 003947 615 NGQFRWISSQMNRVRNGELYRYICDTKGAFVQPAL--YEAFGLTVVEAMTCGLPTFATCNGGPAEIIVHGKSGFHIDP-- 690 (784)
Q Consensus 615 ~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~--~E~fGltvlEAMA~GlPVIaT~~GG~~EiI~dg~~G~li~p-- 690 (784)
.++|.|+- ..+ ..+.+.+-.++|++++||. +|++|++-+-||.-|.+.+++-.|...|.- +|.|||.|.+
T Consensus 546 ~~kVvfle----~Yd-~~lA~~LvaG~DvwLn~prrp~EAsGTSgMKA~~NG~LnlSvlDGww~E~~-~g~nGwaig~~~ 619 (778)
T cd04299 546 RGRIVFLE----DYD-MALARHLVQGVDVWLNTPRRPLEASGTSGMKAALNGGLNLSVLDGWWDEGY-DGENGWAIGDGD 619 (778)
T ss_pred CCcEEEEc----CCC-HHHHHHHHhhhhhcccCCCCCCCCCccchHHHHHcCCeeeecccCcccccc-CCCCceEeCCCc
Confidence 88999985 333 3555555557999999999 999999999999999999999999999987 7899999988
Q ss_pred ----------CCHHHHHHHHHHHHH-HhcC-----CHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Q 003947 691 ----------YKGDQATGILVDFFE-KCKV-----DPGHWDEISQGGLKRIQEKYTWKIYSERLLNLSG 743 (784)
Q Consensus 691 ----------~d~e~lAe~I~~~l~-~ll~-----dp~~~~~m~~~a~~~v~~~ytw~~~a~~ll~ly~ 743 (784)
.|++++-+.|.+.+- ...+ .|..|.+|.+++.+.+...|||..|+++|.+-+-
T Consensus 620 ~~~~~~~~d~~da~~Ly~~Le~~i~p~yy~r~~~g~p~~W~~~~k~sm~~~~p~fs~~Rmv~eY~~~~Y 688 (778)
T cd04299 620 EYEDDEYQDAEEAEALYDLLENEVIPLFYDRDEGGYPPGWVAMMKHSMATLGPRFSAERMVREYVERFY 688 (778)
T ss_pred cccChhhcchhhHHHHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHhcccCCCHHHHHHHHHHHhH
Confidence 566666677754332 2223 2888999999999998889999999999987654
No 94
>TIGR03713 acc_sec_asp1 accessory Sec system protein Asp1. This protein is designated Asp1 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown.
Probab=99.66 E-value=1.6e-14 Score=167.19 Aligned_cols=169 Identities=12% Similarity=0.141 Sum_probs=144.9
Q ss_pred CCEEEEEe--cccCCCChHHHHHHHHHhHccCCCeEEEEEeCCCCCCcccHHHHHHHHHHHHHHHhcCCC----------
Q 003947 548 KPILFTMA--RLDRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYGLIDTYKLN---------- 615 (784)
Q Consensus 548 k~iIl~vG--RL~~~Kgi~~LieA~~~l~~~~~~v~LvIVG~g~~~~s~d~ee~~~~~~l~~li~~l~L~---------- 615 (784)
+..+++++ |+ +.|.++.+++++.++....|++.|.+.|-+.+. ...+.++++++++++.
T Consensus 319 ~~~~I~v~idrL-~ek~~~~~I~av~~~~~~~p~~~L~~~gy~~~~--------~~~~~l~~~i~~~~~~~~~~~~~~~~ 389 (519)
T TIGR03713 319 YETEIGFWIDGL-SDEELQQILQQLLQYILKNPDYELKILTYNNDN--------DITQLLEDILEQINEEYNQDKNFFSL 389 (519)
T ss_pred cceEEEEEcCCC-ChHHHHHHHHHHHHHHhhCCCeEEEEEEecCch--------hHHHHHHHHHHHHHhhhchhhhcccc
Confidence 34577777 99 999999999999999888999999999987431 1235566666777665
Q ss_pred -------------------CcEEEccCcCCcCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcCccccc
Q 003947 616 -------------------GQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCNGGPA 676 (784)
Q Consensus 616 -------------------~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMA~GlPVIaT~~GG~~ 676 (784)
++|.|.|. .+..++.+.+.. +.++|.+|..|+|+ +.+||++.|+|+| .-|+.
T Consensus 390 ~~~~~~~~~~~~~~~~~~~~~v~f~gy----~~e~dl~~~~~~-arl~id~s~~eg~~-~~ieAiS~GiPqI---nyg~~ 460 (519)
T TIGR03713 390 SEQDENQPILQTDEEQKEKERIAFTTL----TNEEDLISALDK-LRLIIDLSKEPDLY-TQISGISAGIPQI---NKVET 460 (519)
T ss_pred chhhhhhhcccchhhcccccEEEEEec----CCHHHHHHHHhh-heEEEECCCCCChH-HHHHHHHcCCCee---ecCCc
Confidence 78999994 344578899986 88999999999999 9999999999999 56789
Q ss_pred cccccCceEEEECCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHH
Q 003947 677 EIIVHGKSGFHIDPYKGDQATGILVDFFEKCKVDPGHWDEISQGGLKRIQEKYTWKIYSERLLNL 741 (784)
Q Consensus 677 EiI~dg~~G~li~p~d~e~lAe~I~~~l~~ll~dp~~~~~m~~~a~~~v~~~ytw~~~a~~ll~l 741 (784)
++|.||+||+++ +|..+++++|..+ +.+++.|++++..+.+.+ ++||-+.+++++.++
T Consensus 461 ~~V~d~~NG~li--~d~~~l~~al~~~----L~~~~~wn~~~~~sy~~~-~~yS~~~i~~kW~~~ 518 (519)
T TIGR03713 461 DYVEHNKNGYII--DDISELLKALDYY----LDNLKNWNYSLAYSIKLI-DDYSSENIIERLNEL 518 (519)
T ss_pred eeeEcCCCcEEe--CCHHHHHHHHHHH----HhCHHHHHHHHHHHHHHH-HHhhHHHHHHHHHhh
Confidence 999999999999 7999999999854 589999999999999998 999999999888764
No 95
>PF05693 Glycogen_syn: Glycogen synthase; InterPro: IPR008631 This family consists of the eukaryotic glycogen synthase proteins GYS1, GYS2 and GYS3. Glycogen synthase (GS) is the enzyme responsible for the synthesis of -1,4-linked glucose chains in glycogen. It is the rate limiting enzyme in the synthesis of the polysaccharide, and its activity is highly regulated through phosphorylation at multiple sites and also by allosteric effectors, mainly glucose 6-phosphate (G6P) [].; GO: 0004373 glycogen (starch) synthase activity, 0005978 glycogen biosynthetic process; PDB: 3NB0_C 3RT1_C 3RSZ_D 3O3C_B 3NAZ_B 3NCH_D.
Probab=99.61 E-value=3.8e-14 Score=160.99 Aligned_cols=329 Identities=16% Similarity=0.169 Sum_probs=182.6
Q ss_pred CCceEEEEcCCChhHHHHHHHH-hCCCcEEEEecCCcccCCC---CCc-------chhhhccccccccchhhhhHHHhcc
Q 003947 382 CKPDLIIGNYSDGNIVASLLAH-KLDVTQCTIAHALELTKYP---DSD-------INWKKLDDKYHFSCQFTADLFAMNR 450 (784)
Q Consensus 382 ~~pDIIh~~~~~~~lva~llar-~~gvp~V~t~H~l~~~k~~---~s~-------~~~~~~~~~y~~~~~~~~e~~a~~~ 450 (784)
.+.-|.|+|-|..+.-..++.+ ...|..|+|.|+.-...+. ..+ ..+......+....+...|+.+...
T Consensus 142 ~~~ViaHfHEWmaG~gll~lr~~~~~VaTvFTTHAT~lGR~l~~~~~~~Y~~L~~~~~d~eA~~~~i~~k~~iEraaA~~ 221 (633)
T PF05693_consen 142 KPKVIAHFHEWMAGVGLLYLRKRKPDVATVFTTHATLLGRYLAANNKDFYNNLDKFNGDQEAGERNIYHKHSIERAAAHY 221 (633)
T ss_dssp SEEEEEEEESGGGTTHHHHHHHTT-SCEEEEEESS-HHHHHHTTTSS-TTTSGTTS-HHHHHHHTT-HHHHHHHHHHHHH
T ss_pred CCcEEEEechHhHhHHHHHHhccCCCeeEEEEecccchhhHhhcCCCcHHHHhhccCccccccCccchHHHHHHHHHHHh
Confidence 3556778999987544333333 3457889999985432221 011 1122222334444556678889999
Q ss_pred cCEEEecChHhHhhccccccccccccccccccceeeecCCCCCCCceEEecCCCCCCCCCCCcHHHHhhhcchhhhHH--
Q 003947 451 TDFIITSTFQEIAGSKDTVGQYESHTAFSLPGLYRVVNGIDAFDPKFNIVSPGADMTIYFPYMEEKRRLKHFHSEIEE-- 528 (784)
Q Consensus 451 AD~IIt~S~~~~~~~~~~vgqYe~~~~f~~p~l~~~~~gi~~f~~k~~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~-- 528 (784)
||+..|+|+-.+...+..++ ...=.|+|||.+.+.|....+........+.+|.+
T Consensus 222 AdvFTTVSeITa~Ea~~LL~-----------------------r~pDvV~pNGl~v~~~~~~~efqnl~~~~k~ki~~fv 278 (633)
T PF05693_consen 222 ADVFTTVSEITAKEAEHLLK-----------------------RKPDVVTPNGLNVDKFPALHEFQNLHAKAKEKIHEFV 278 (633)
T ss_dssp SSEEEESSHHHHHHHHHHHS-----------------------S--SEE----B-GGGTSSTTHHHHHHHHHHHHHHHHH
T ss_pred cCeeeehhhhHHHHHHHHhC-----------------------CCCCEEcCCCccccccccchHHHHHHHHHHHHHHHHH
Confidence 99999999877765444322 22236789999998776654433211111222332
Q ss_pred --hhcCchhhhhhhccccCCCCCEEEEEeccc-CCCChHHHHHHHHHhHcc----CCC---eEEEEEeCCCCCCcccHHH
Q 003947 529 --LLYSPVENKEHLCVLKDSSKPILFTMARLD-RVKNLTGLVEWYGKNAKL----REL---VNLVVVGGDRRKESKDLEE 598 (784)
Q Consensus 529 --~l~~~~~~~~~~gll~~~~k~iIl~vGRL~-~~Kgi~~LieA~~~l~~~----~~~---v~LvIVG~g~~~~s~d~ee 598 (784)
.+++. +.+ ..++..+|++.||.+ +.||+|.++||++++... ..+ +-|+|+=.... +...|-
T Consensus 279 ~~~f~g~------~df-d~d~tl~~ftsGRYEf~NKG~D~fieAL~rLn~~lk~~~~~~tVVaFii~pa~~~--~~~ve~ 349 (633)
T PF05693_consen 279 RGHFYGH------YDF-DLDKTLYFFTSGRYEFRNKGIDVFIEALARLNHRLKQAGSDKTVVAFIIVPAKTN--SFNVES 349 (633)
T ss_dssp HHHSTT---------S--GGGEEEEEEESSS-TTTTTHHHHHHHHHHHHHHHHHTT-S-EEEEEEE---SEE--EE-HHH
T ss_pred HHHhccc------CCC-CccceEEEEeeeceeeecCCccHHHHHHHHHHHHHhhcCCCCeEEEEEEecCccC--CcCHHH
Confidence 22222 122 123457789999998 689999999999987531 222 33444433221 111111
Q ss_pred HH----------------------------------------------------------------------HHHHHHHH
Q 003947 599 QA----------------------------------------------------------------------EMKKMYGL 608 (784)
Q Consensus 599 ~~----------------------------------------------------------------------~~~~l~~l 608 (784)
.. .-+.+...
T Consensus 350 l~~~a~~~~l~~t~~~i~~~~g~~~~~~~~~~~~p~~~~~~~~~~~~~lkr~i~~~~r~~lPPi~TH~l~d~~~DpILn~ 429 (633)
T PF05693_consen 350 LKGQAVTKQLRDTVDEIQEKIGKRLFESCLSGRLPDLNELLDKEDIVRLKRCIFALQRNSLPPITTHNLHDDSNDPILNM 429 (633)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSS-SHHHCS-HHHHHHHHHHHHTT--T----SBSEEETTTTT-HHHHH
T ss_pred HhhHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCChHHhcChhhHHHHHHHHHHhccCCCCCeeeeCCCCCccCHHHHH
Confidence 00 11233444
Q ss_pred HHhcCCC----Cc--EEEcc---CcCCcCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcCcccccccc
Q 003947 609 IDTYKLN----GQ--FRWIS---SQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCNGGPAEII 679 (784)
Q Consensus 609 i~~l~L~----~~--V~flG---~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMA~GlPVIaT~~GG~~EiI 679 (784)
+++.++. ++ |.|++ ...+.+=+-+.+.++.. +|+.|+||+||+||.|.+|+.++|+|+|+|+..|+...+
T Consensus 430 irr~~L~N~~~drVKVIF~P~yL~~~dgif~l~Y~dfv~G-cdLgvFPSYYEPWGYTPlE~~a~gVPsITTnLsGFG~~~ 508 (633)
T PF05693_consen 430 IRRLGLFNNPEDRVKVIFHPEYLSGTDGIFNLDYYDFVRG-CDLGVFPSYYEPWGYTPLECTAFGVPSITTNLSGFGCWM 508 (633)
T ss_dssp HHHTT----TT-SEEEEE--S---TTSSSS-S-HHHHHHH-SSEEEE--SSBSS-HHHHHHHHTT--EEEETTBHHHHHH
T ss_pred HHhCCCCCCCCCceEEEEeeccccCCCCCCCCCHHHHhcc-CceeeeccccccccCChHHHhhcCCceeeccchhHHHHH
Confidence 4455542 22 45554 12233444567888885 999999999999999999999999999999999986555
Q ss_pred cc-----CceEEEE-C--CCCHHHHHHHHHHHHHHh-cCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Q 003947 680 VH-----GKSGFHI-D--PYKGDQATGILVDFFEKC-KVDPGHWDEISQGGLKRIQEKYTWKIYSERLLNLSGV 744 (784)
Q Consensus 680 ~d-----g~~G~li-~--p~d~e~lAe~I~~~l~~l-l~dp~~~~~m~~~a~~~v~~~ytw~~~a~~ll~ly~~ 744 (784)
.+ ...|+.| + -.+.++.++.|.+++... ..+...+..+..++.+. .+..+|+.....|.+.|..
T Consensus 509 ~~~~~~~~~~GV~VvdR~~~n~~e~v~~la~~l~~f~~~~~rqri~~Rn~ae~L-S~~~dW~~~~~yY~~Ay~~ 581 (633)
T PF05693_consen 509 QEHIEDPEEYGVYVVDRRDKNYDESVNQLADFLYKFCQLSRRQRIIQRNRAERL-SDLADWKNFGKYYEKAYDL 581 (633)
T ss_dssp HTTS-HHGGGTEEEE-SSSS-HHHHHHHHHHHHHHHHT--HHHHHHHHHHHHHH-GGGGBHHHHCHHHHHHHHH
T ss_pred HHhhccCcCCcEEEEeCCCCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH-HHhCCHHHHHHHHHHHHHH
Confidence 42 3346644 3 346777777777766554 34566666666666554 4999999999999998874
No 96
>PF13692 Glyco_trans_1_4: Glycosyl transferases group 1; PDB: 3OY2_A 3OY7_B 2Q6V_A 2HY7_A 3CV3_A 3CUY_A.
Probab=99.56 E-value=1.2e-14 Score=137.63 Aligned_cols=130 Identities=19% Similarity=0.272 Sum_probs=95.7
Q ss_pred CCEEEEEecccCCCChHHHHH-HHHHhHccCCCeEEEEEeCCCCCCcccHHHHHHHHHHHHHHHhcCCCCcEEEccCcCC
Q 003947 548 KPILFTMARLDRVKNLTGLVE-WYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYGLIDTYKLNGQFRWISSQMN 626 (784)
Q Consensus 548 k~iIl~vGRL~~~Kgi~~Lie-A~~~l~~~~~~v~LvIVG~g~~~~s~d~ee~~~~~~l~~li~~l~L~~~V~flG~~~~ 626 (784)
.++|+++|++.+.||++.+++ ++.++.+..|++.|+|+|++++ +++++ ..++|+|+|
T Consensus 2 ~~~i~~~g~~~~~k~~~~li~~~~~~l~~~~p~~~l~i~G~~~~-------------~l~~~-----~~~~v~~~g---- 59 (135)
T PF13692_consen 2 ILYIGYLGRIRPDKGLEELIEAALERLKEKHPDIELIIIGNGPD-------------ELKRL-----RRPNVRFHG---- 59 (135)
T ss_dssp -EEEE--S-SSGGGTHHHHHH-HHHHHHHHSTTEEEEEECESS--------------HHCCH-----HHCTEEEE-----
T ss_pred cccccccccccccccccchhhhHHHHHHHHCcCEEEEEEeCCHH-------------HHHHh-----cCCCEEEcC----
Confidence 467999999999999999999 9999998889999999999753 12222 245899999
Q ss_pred cCChhHHHHHHHccccEEEeCCC-CCCCcHHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHHHHHHHHHHHH
Q 003947 627 RVRNGELYRYICDTKGAFVQPAL-YEAFGLTVVEAMTCGLPTFATCNGGPAEIIVHGKSGFHIDPYKGDQATGILVDFF 704 (784)
Q Consensus 627 ~v~~~el~~~la~aadvfV~PS~-~E~fGltvlEAMA~GlPVIaT~~GG~~EiI~dg~~G~li~p~d~e~lAe~I~~~l 704 (784)
.+ +++.++++. +|+++.|+. .++++.+++|||++|+|||+++. +..+++.....|.++ ++|+++++++|.+++
T Consensus 60 ~~--~e~~~~l~~-~dv~l~p~~~~~~~~~k~~e~~~~G~pvi~~~~-~~~~~~~~~~~~~~~-~~~~~~l~~~i~~l~ 133 (135)
T PF13692_consen 60 FV--EELPEILAA-ADVGLIPSRFNEGFPNKLLEAMAAGKPVIASDN-GAEGIVEEDGCGVLV-ANDPEELAEAIERLL 133 (135)
T ss_dssp S---HHHHHHHHC--SEEEE-BSS-SCC-HHHHHHHCTT--EEEEHH-HCHCHS---SEEEE--TT-HHHHHHHHHHHH
T ss_pred CH--HHHHHHHHh-CCEEEEEeeCCCcCcHHHHHHHHhCCCEEECCc-chhhheeecCCeEEE-CCCHHHHHHHHHHHh
Confidence 55 489999996 999999985 78999999999999999999998 677777656677777 789999999998654
No 97
>KOG2941 consensus Beta-1,4-mannosyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.51 E-value=5.3e-12 Score=133.52 Aligned_cols=386 Identities=12% Similarity=0.107 Sum_probs=233.1
Q ss_pred HHHHHcCCCcccceEEEecCCCCCCCCCcCcceeeecCcCCeEEEEccCCCCcccccccccccCChhhHHHHHHHHHHHH
Q 003947 297 LRIKQQGLDITPRILIITRLLPDAVGTTCGQRVEKVYGTKYSDILRVPFRTEEGIVRKWISRFEVWPYLETFTEDVATEI 376 (784)
Q Consensus 297 ~~L~~~GheV~~~i~VvTr~~~~~~g~~~~~~~e~v~~~~~v~IlrvP~~~~~~~~~~~isr~~l~~yl~~f~~~~~~~i 376 (784)
..|++.|++|+ ++.-..+ .+.+++...++++|+.+|--+..+...+ . +.--+..|.+.+ .-+
T Consensus 34 ~Sla~~gf~Vd----liGy~~s--------~p~e~l~~hprI~ih~m~~l~~~~~~p~----~-~~l~lKvf~Qfl-~Ll 95 (444)
T KOG2941|consen 34 LSLAKLGFQVD----LIGYVES--------IPLEELLNHPRIRIHGMPNLPFLQGGPR----V-LFLPLKVFWQFL-SLL 95 (444)
T ss_pred HHHHHcCCeEE----EEEecCC--------CChHHHhcCCceEEEeCCCCcccCCCch----h-hhhHHHHHHHHH-HHH
Confidence 36799999999 7754321 2344555567899998876543221110 0 000111121111 111
Q ss_pred HHH-cCCCceEEEEcCCCh---hHHHHHHHHhCCCcEEEEecCCccc-CCCCCcchhhhccccccccchhhhhHHHhccc
Q 003947 377 IQE-LQCKPDLIIGNYSDG---NIVASLLAHKLDVTQCTIAHALELT-KYPDSDINWKKLDDKYHFSCQFTADLFAMNRT 451 (784)
Q Consensus 377 ~~~-~~~~pDIIh~~~~~~---~lva~llar~~gvp~V~t~H~l~~~-k~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~A 451 (784)
.+. ....+|+|...++.+ -.++.+.+...|.+++.+.|++..+ ....+ ....... ..+....|+..-+.|
T Consensus 96 ~aL~~~~~~~~ilvQNPP~iPtliv~~~~~~l~~~KfiIDWHNy~Ysl~l~~~---~g~~h~l--V~l~~~~E~~fgk~a 170 (444)
T KOG2941|consen 96 WALFVLRPPDIILVQNPPSIPTLIVCVLYSILTGAKFIIDWHNYGYSLQLKLK---LGFQHPL--VRLVRWLEKYFGKLA 170 (444)
T ss_pred HHHHhccCCcEEEEeCCCCCchHHHHHHHHHHhcceEEEEehhhHHHHHHHhh---cCCCCch--HHHHHHHHHHhhccc
Confidence 111 156899999988875 4577777788899999999997643 10000 0000111 122223467777889
Q ss_pred CEEEecChHhHhhccccccccccccccccccceeeecCCCCCCCceE--EecCCCCCCCCCCCcHHHHhhhcchhhhHHh
Q 003947 452 DFIITSTFQEIAGSKDTVGQYESHTAFSLPGLYRVVNGIDAFDPKFN--IVSPGADMTIYFPYMEEKRRLKHFHSEIEEL 529 (784)
Q Consensus 452 D~IIt~S~~~~~~~~~~vgqYe~~~~f~~p~l~~~~~gi~~f~~k~~--VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~ 529 (784)
|.-.|+|..+++.+.+.+|--.....+..|.- ++.+ -...+ ..+-+-|...|.. | ..-...+++-
T Consensus 171 ~~nLcVT~AMr~dL~qnWgi~ra~v~YDrPps----~~~~--l~~~H~lf~~l~~d~~~f~a------r-~~q~~~~~~t 237 (444)
T KOG2941|consen 171 DYNLCVTKAMREDLIQNWGINRAKVLYDRPPS----KPTP--LDEQHELFMKLAGDHSPFRA------R-EPQDKALERT 237 (444)
T ss_pred ccchhhHHHHHHHHHHhcCCceeEEEecCCCC----CCCc--hhHHHHHHhhhccccchhhh------c-ccccchhhhh
Confidence 99999999998877776652211111111110 0000 00000 0011111111110 0 0001112222
Q ss_pred hcCchhh-hhhhccccCCCCCEEEEEecccCCCChHHHHHHHHHhH-----c--cCCCeEEEEEeCCCCCCcccHHHHHH
Q 003947 530 LYSPVEN-KEHLCVLKDSSKPILFTMARLDRVKNLTGLVEWYGKNA-----K--LRELVNLVVVGGDRRKESKDLEEQAE 601 (784)
Q Consensus 530 l~~~~~~-~~~~gll~~~~k~iIl~vGRL~~~Kgi~~LieA~~~l~-----~--~~~~v~LvIVG~g~~~~s~d~ee~~~ 601 (784)
.|..-.. +...-. .....++++.....+..++..|++|+..-. + ..|..-++|.|.||.
T Consensus 238 af~~k~~s~~v~~~--~~~pallvsSTswTpDEdf~ILL~AL~~y~~~~~~~~~~lP~llciITGKGPl----------- 304 (444)
T KOG2941|consen 238 AFTKKDASGDVQLL--PERPALLVSSTSWTPDEDFGILLEALVIYEEQLYDKTHNLPSLLCIITGKGPL----------- 304 (444)
T ss_pred hHhhhcccchhhhc--cCCCeEEEecCCCCCcccHHHHHHHHHhhhhhhhhccCCCCcEEEEEcCCCch-----------
Confidence 2221111 001111 222345667778899999999999987331 1 246778888888876
Q ss_pred HHHHHHHHHhcCCCCcEEEccCcCCcCChhHHHHHHHccccEEEe--CCC-CCCCcHHHHHHHHcCCcEEEcCccccccc
Q 003947 602 MKKMYGLIDTYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQ--PAL-YEAFGLTVVEAMTCGLPTFATCNGGPAEI 678 (784)
Q Consensus 602 ~~~l~~li~~l~L~~~V~flG~~~~~v~~~el~~~la~aadvfV~--PS~-~E~fGltvlEAMA~GlPVIaT~~GG~~Ei 678 (784)
.+++.+.|++++++ +|.+.- .+...++...+++ ++|+.|. .|. .=..|++|+....||+||+|-++.-+.|+
T Consensus 305 kE~Y~~~I~~~~~~-~v~~~t---pWL~aEDYP~ll~-saDlGVcLHtSSSGLDLPMKVVDMFGcglPvcA~~fkcl~EL 379 (444)
T KOG2941|consen 305 KEKYSQEIHEKNLQ-HVQVCT---PWLEAEDYPKLLA-SADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVNFKCLDEL 379 (444)
T ss_pred hHHHHHHHHHhccc-ceeeee---cccccccchhHhh-ccccceEeeecCcccCcchhHHHhhcCCCceeeecchhHHHH
Confidence 36777888988875 355443 3778888888888 4886554 443 33579999999999999999999999999
Q ss_pred cccCceEEEECCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHH
Q 003947 679 IVHGKSGFHIDPYKGDQATGILVDFFEKCKVDPGHWDEISQGGLKRIQEKYTWKIYSERLLN 740 (784)
Q Consensus 679 I~dg~~G~li~p~d~e~lAe~I~~~l~~ll~dp~~~~~m~~~a~~~v~~~ytw~~~a~~ll~ 740 (784)
++||+||++++ |.+++|+++.-.+...-.+.+..+++.+++++. +.+.|+...++...
T Consensus 380 Vkh~eNGlvF~--Ds~eLa~ql~~lf~~fp~~a~~l~~lkkn~~e~--~e~RW~~~W~~~~~ 437 (444)
T KOG2941|consen 380 VKHGENGLVFE--DSEELAEQLQMLFKNFPDNADELNQLKKNLREE--QELRWDESWERTAL 437 (444)
T ss_pred HhcCCCceEec--cHHHHHHHHHHHHhcCCCCHHHHHHHHHhhHHH--HhhhHHHHHHHhhh
Confidence 99999999995 899999999877766666899999999999987 67888877766544
No 98
>TIGR00215 lpxB lipid-A-disaccharide synthase. Lipid-A precursor biosynthesis producing lipid A disaccharide in a condensation reaction. transcribed as part of an operon including lpxA
Probab=99.49 E-value=3.8e-12 Score=142.94 Aligned_cols=249 Identities=15% Similarity=0.089 Sum_probs=151.4
Q ss_pred CCCceEEEEcCCCh-hHHHHHHHHhCCCcEEEEecCCcccCCCCCcchhhhccccccccchhhhhHHHhcccCEEEecCh
Q 003947 381 QCKPDLIIGNYSDG-NIVASLLAHKLDVTQCTIAHALELTKYPDSDINWKKLDDKYHFSCQFTADLFAMNRTDFIITSTF 459 (784)
Q Consensus 381 ~~~pDIIh~~~~~~-~lva~llar~~gvp~V~t~H~l~~~k~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~ 459 (784)
..+||+|++....+ ++.....++.+|+|+++.+. .+ . ..|.... -+...+.+|.|+++++
T Consensus 87 ~~kPd~vi~~g~~~~~~~~a~aa~~~gip~v~~i~-P~--~-----waw~~~~-----------~r~l~~~~d~v~~~~~ 147 (385)
T TIGR00215 87 QAKPDLLVGIDAPDFNLTKELKKKDPGIKIIYYIS-PQ--V-----WAWRKWR-----------AKKIEKATDFLLAILP 147 (385)
T ss_pred hcCCCEEEEeCCCCccHHHHHHHhhCCCCEEEEeC-Cc--H-----hhcCcch-----------HHHHHHHHhHhhccCC
Confidence 45899999887644 55555678889999884431 11 0 1121110 1234678999999997
Q ss_pred HhHhhccccccccccccccccccceeeecCCCCCCCceEEecCCCCCCCCC--CCcHHHHhhhcchhhhHHhhcCchhhh
Q 003947 460 QEIAGSKDTVGQYESHTAFSLPGLYRVVNGIDAFDPKFNIVSPGADMTIYF--PYMEEKRRLKHFHSEIEELLYSPVENK 537 (784)
Q Consensus 460 ~~~~~~~~~vgqYe~~~~f~~p~l~~~~~gi~~f~~k~~VIpnGvD~~~f~--p~~~~~~rl~~~~~~~~~~l~~~~~~~ 537 (784)
.+.+. +. .. ..+..++.|++...... +... ..+
T Consensus 148 ~e~~~-------------------~~-~~-----g~~~~~vGnPv~~~~~~~~~~~~--------------------~~r 182 (385)
T TIGR00215 148 FEKAF-------------------YQ-KK-----NVPCRFVGHPLLDAIPLYKPDRK--------------------SAR 182 (385)
T ss_pred CcHHH-------------------HH-hc-----CCCEEEECCchhhhccccCCCHH--------------------HHH
Confidence 76541 11 01 23556677776332211 1111 123
Q ss_pred hhhccccCCCCCEEEEEe--cccC-CCChHHHHHHHHHhHccCCCeEEEEEeCCCCCCcccHHHHHHHHHHHHHHHhcCC
Q 003947 538 EHLCVLKDSSKPILFTMA--RLDR-VKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYGLIDTYKL 614 (784)
Q Consensus 538 ~~~gll~~~~k~iIl~vG--RL~~-~Kgi~~LieA~~~l~~~~~~v~LvIVG~g~~~~s~d~ee~~~~~~l~~li~~l~L 614 (784)
+.+|+ ++++++|+.+| |..+ .|++..+++++..+.+..|++++++++.... ..+.+.+..+.++.
T Consensus 183 ~~lgl--~~~~~~Ilvl~GSR~aei~k~~~~ll~a~~~l~~~~p~~~~vi~~~~~~----------~~~~~~~~~~~~~~ 250 (385)
T TIGR00215 183 EKLGI--DHNGETLALLPGSRGSEVEKLFPLFLKAAQLLEQQEPDLRRVLPVVNFK----------RRLQFEQIKAEYGP 250 (385)
T ss_pred HHcCC--CCCCCEEEEECCCCHHHHHHhHHHHHHHHHHHHHhCCCeEEEEEeCCch----------hHHHHHHHHHHhCC
Confidence 45666 56778776653 7666 6899999999999988778999877654421 12334555566666
Q ss_pred CCcEEEccCcCCcCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcC-ccc----------------ccc
Q 003947 615 NGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATC-NGG----------------PAE 677 (784)
Q Consensus 615 ~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMA~GlPVIaT~-~GG----------------~~E 677 (784)
..+|.+++ .+...+|+ ++|++|.+| |.+.+|||+||+|+|.+. ..- .+.
T Consensus 251 ~~~v~~~~--------~~~~~~l~-aADl~V~~S-----Gt~tlEa~a~G~P~Vv~yk~~pl~~~~~~~~~~~~~~~~~n 316 (385)
T TIGR00215 251 DLQLHLID--------GDARKAMF-AADAALLAS-----GTAALEAALIKTPMVVGYRMKPLTFLIARRLVKTDYISLPN 316 (385)
T ss_pred CCcEEEEC--------chHHHHHH-hCCEEeecC-----CHHHHHHHHcCCCEEEEEcCCHHHHHHHHHHHcCCeeeccH
Confidence 66677664 14566777 599999999 888889999999999872 111 222
Q ss_pred ccccCceEE-EE-CCCCHHHHHHHHHHHHHHhcCCH----HHHHHHHHHHHH
Q 003947 678 IIVHGKSGF-HI-DPYKGDQATGILVDFFEKCKVDP----GHWDEISQGGLK 723 (784)
Q Consensus 678 iI~dg~~G~-li-~p~d~e~lAe~I~~~l~~ll~dp----~~~~~m~~~a~~ 723 (784)
++.+..-.- ++ +.-+++.+++.+. .++.|+ +.++++.+.-.+
T Consensus 317 il~~~~~~pel~q~~~~~~~l~~~~~----~ll~~~~~~~~~~~~~~~~~~~ 364 (385)
T TIGR00215 317 ILANRLLVPELLQEECTPHPLAIALL----LLLENGLKAYKEMHRERQFFEE 364 (385)
T ss_pred HhcCCccchhhcCCCCCHHHHHHHHH----HHhcCCcccHHHHHHHHHHHHH
Confidence 222211111 11 2235666776665 556788 877777654443
No 99
>PF00982 Glyco_transf_20: Glycosyltransferase family 20; InterPro: IPR001830 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 20 GT20 from CAZY comprises enzymes with only one known activity; alpha, alpha-trehalose-phosphate synthase [UDP-forming] (2.4.1.15 from EC). Synthesis of trehalose in the yeast Saccharomyces cerevisiae is catalysed by the trehalose-6-phosphate (Tre6P) synthase/phosphatase complex, which is composed of at least three different subunits encoded by the genes TPS1, TPS2, and TSL1. Tps1 and Tps2 carry the catalytic activities of trehalose synthesis, namely Tre6P synthase (Tps1) and Tre6P phosphatase (Tps2), while TsI1 has regulatory functions. There is some evidence that TsI1 and Tps3 may share a common function with respect to regulation and/or structural stabilisation of the Tre6P synthase/phosphatase complex in exponentially growing, heat-shocked cells []. OtsA (trehalose-6-phosphate synthase) from Escherichia coli has homology to the full-length TPS1, the N-terminal part of TPS2 and an internal region of TPS3 (TSL1) of yeast [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1UQU_A 2WTX_A 1UQT_B 1GZ5_B.
Probab=99.42 E-value=9.3e-12 Score=142.38 Aligned_cols=323 Identities=15% Similarity=0.141 Sum_probs=184.5
Q ss_pred HHHHHHHHHHHHcCCCceEEEEcCCChhHHHHHHHHhC-CCcEEEEecCCcccCCCCCcchhhhccccccccchhhhhHH
Q 003947 368 FTEDVATEIIQELQCKPDLIIGNYSDGNIVASLLAHKL-DVTQCTIAHALELTKYPDSDINWKKLDDKYHFSCQFTADLF 446 (784)
Q Consensus 368 f~~~~~~~i~~~~~~~pDIIh~~~~~~~lva~llar~~-gvp~V~t~H~l~~~k~~~s~~~~~~~~~~y~~~~~~~~e~~ 446 (784)
..+..+..+.+.. ..-|+|..|+....+++..+.++. +.++.+..|..+++ ++ .++.+.....-+.
T Consensus 127 vN~~FA~~i~~~~-~~~D~VWVhDYhL~llP~~LR~~~~~~~IgfFlHiPFPs----~e--------~fr~lP~r~eiL~ 193 (474)
T PF00982_consen 127 VNRRFADAIAEVY-RPGDLVWVHDYHLMLLPQMLRERGPDARIGFFLHIPFPS----SE--------IFRCLPWREEILR 193 (474)
T ss_dssp HHHHHHHHHGGG---TT-EEEEESGGGTTHHHHHHHTT--SEEEEEE-S--------HH--------HHTTSTTHHHHHH
T ss_pred HHHHHHHHHHHhC-cCCCEEEEeCCcHHHHHHHHHhhcCCceEeeEEecCCCC----HH--------HHhhCCcHHHHHH
Confidence 3334444444442 367999999999878888777764 57788888875432 21 1111112222334
Q ss_pred HhcccCEEEecChHhHhhccccccccccccccccccceeeec--CCCCCC--CceEEecCCCCCCCCCCCcH---HHHhh
Q 003947 447 AMNRTDFIITSTFQEIAGSKDTVGQYESHTAFSLPGLYRVVN--GIDAFD--PKFNIVSPGADMTIYFPYME---EKRRL 519 (784)
Q Consensus 447 a~~~AD~IIt~S~~~~~~~~~~vgqYe~~~~f~~p~l~~~~~--gi~~f~--~k~~VIpnGvD~~~f~p~~~---~~~rl 519 (784)
.|-.||.|-+.|+..+....+.....- ++-.... ++.+.. -++.+.|-|||.+.|..... ...+.
T Consensus 194 glL~aDlIgFqt~~~~~nFl~~~~r~l--------g~~~~~~~~~v~~~Gr~v~v~~~pigId~~~~~~~~~~~~v~~~~ 265 (474)
T PF00982_consen 194 GLLGADLIGFQTFEYARNFLSCCKRLL--------GLEVDSDRGTVEYNGRRVRVGVFPIGIDPDAFAQLARSPEVQERA 265 (474)
T ss_dssp HHTTSSEEEESSHHHHHHHHHHHHHHS---------EEEEETTE-EEETTEEEEEEE------HHHHHHHHH-S---HHH
T ss_pred HhhcCCEEEEecHHHHHHHHHHHHHHc--------CCcccCCCceEEECCEEEEEEEeeccCChHHHHhhccChHHHHHH
Confidence 788999999999877663333221110 0000001 122112 25677899999877643211 11111
Q ss_pred hcchhhhHHhhcCchhhhhhhccccCCC-CCEEEEEecccCCCChHHHHHHHHHhHccCC----CeEEEEEeCCCCCCcc
Q 003947 520 KHFHSEIEELLYSPVENKEHLCVLKDSS-KPILFTMARLDRVKNLTGLVEWYGKNAKLRE----LVNLVVVGGDRRKESK 594 (784)
Q Consensus 520 ~~~~~~~~~~l~~~~~~~~~~gll~~~~-k~iIl~vGRL~~~Kgi~~LieA~~~l~~~~~----~v~LvIVG~g~~~~s~ 594 (784)
. ..++.+ .+ ..+|+.+.|++..||+..=+.|+.++.+.+| ++.|+-++.... +.
T Consensus 266 ~--------------~l~~~~-----~~~~~ii~gvDrld~~kGi~~kl~Afe~fL~~~P~~~~kv~liQi~~psr--~~ 324 (474)
T PF00982_consen 266 E--------------ELREKF-----KGKRKIIVGVDRLDYTKGIPEKLRAFERFLERYPEYRGKVVLIQIAVPSR--ED 324 (474)
T ss_dssp H--------------HHHHHT-----TT-SEEEEEE--B-GGG-HHHHHHHHHHHHHH-GGGTTTEEEEEE--B-S--TT
T ss_pred H--------------HHHHhc-----CCCcEEEEEeccchhhcCHHHHHHHHHHHHHhCcCccCcEEEEEEeeccC--cc
Confidence 1 111222 24 4899999999999999999999998876554 577777775333 23
Q ss_pred cHHHHHHHHHHHHHHHh----cCCCC--cEEEccCcCCcCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCc--
Q 003947 595 DLEEQAEMKKMYGLIDT----YKLNG--QFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLP-- 666 (784)
Q Consensus 595 d~ee~~~~~~l~~li~~----l~L~~--~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMA~GlP-- 666 (784)
..++.+..+++.+++.+ +|-.+ -|.++- ..++.+++..++.. +|+++.+|..+|.-++..|+.+|..+
T Consensus 325 ~~~y~~~~~~v~~~v~~IN~~~g~~~~~PI~~~~---~~~~~~~~~aly~~-aDv~lvTslrDGmNLva~Eyva~q~~~~ 400 (474)
T PF00982_consen 325 VPEYQELRREVEELVGRINGKYGTPDWTPIIYIY---RSLSFEELLALYRA-ADVALVTSLRDGMNLVAKEYVACQDDNP 400 (474)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHH-BTTB-SEEEE----S---HHHHHHHHHH--SEEEE--SSBS--HHHHHHHHHS-TS-
T ss_pred chhHHHHHHHHHHHHHHHHhhcccCCceeEEEEe---cCCCHHHHHHHHHh-hhhEEecchhhccCCcceEEEEEecCCC
Confidence 34444555556555554 33222 255554 36789999999995 99999999999999999999999876
Q ss_pred --EEEcCccccccccccCceEEEECCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Q 003947 667 --TFATCNGGPAEIIVHGKSGFHIDPYKGDQATGILVDFFEKCKVDPGHWDEISQGGLKRIQEKYTWKIYSERLLNLS 742 (784)
Q Consensus 667 --VIaT~~GG~~EiI~dg~~G~li~p~d~e~lAe~I~~~l~~ll~dp~~~~~m~~~a~~~v~~~ytw~~~a~~ll~ly 742 (784)
+|.|...|.++.+.++ .++++|.|.+++|++|.++++ ..++.++...++.++++ ..+|-...++.+++-.
T Consensus 401 GvLiLSefaGaa~~L~~~--al~VNP~d~~~~A~ai~~AL~---M~~~Er~~r~~~~~~~v-~~~~~~~W~~~~l~~L 472 (474)
T PF00982_consen 401 GVLILSEFAGAAEQLSEA--ALLVNPWDIEEVADAIHEALT---MPPEERKERHARLREYV-REHDVQWWAESFLRDL 472 (474)
T ss_dssp -EEEEETTBGGGGT-TTS---EEE-TT-HHHHHHHHHHHHT-----HHHHHHHHHHHHHHH-HHT-HHHHHHHHHHHH
T ss_pred CceEeeccCCHHHHcCCc--cEEECCCChHHHHHHHHHHHc---CCHHHHHHHHHHHHHHh-HhCCHHHHHHHHHHHh
Confidence 7779999999988553 589999999999999997663 67777777777788887 8899998888887654
No 100
>PRK10117 trehalose-6-phosphate synthase; Provisional
Probab=99.38 E-value=6.8e-11 Score=134.09 Aligned_cols=323 Identities=14% Similarity=0.057 Sum_probs=213.2
Q ss_pred HHHHHHHHHcCCCceEEEEcCCChhHHHHHHHHh-CCCcEEEEecCCcccCCCCCcchhhhccccccccchhhhhHHHhc
Q 003947 371 DVATEIIQELQCKPDLIIGNYSDGNIVASLLAHK-LDVTQCTIAHALELTKYPDSDINWKKLDDKYHFSCQFTADLFAMN 449 (784)
Q Consensus 371 ~~~~~i~~~~~~~pDIIh~~~~~~~lva~llar~-~gvp~V~t~H~l~~~k~~~s~~~~~~~~~~y~~~~~~~~e~~a~~ 449 (784)
..+..+.+... .-|+|..|+....+++..+.++ ...++-+-.|..++ .+++. +.+.+-..-+..|-
T Consensus 112 ~FA~~v~~~~~-~~D~VWVHDYhL~llp~~LR~~~~~~~IgFFlHiPFP----s~eif--------r~LP~r~eil~glL 178 (474)
T PRK10117 112 LLADKLLPLLK-DDDIIWIHDYHLLPFASELRKRGVNNRIGFFLHIPFP----TPEIF--------NALPPHDELLEQLC 178 (474)
T ss_pred HHHHHHHHhcC-CCCEEEEeccHhhHHHHHHHHhCCCCcEEEEEeCCCC----ChHHH--------hhCCChHHHHHHHH
Confidence 34444444432 3489999999988888877665 34677788886533 23211 11111122334788
Q ss_pred ccCEEEecChHhHhhccccccccccccccccccceeeecCCCCCCCceEEecCCCCCCCCCCCcHH--HHhhhcchhhhH
Q 003947 450 RTDFIITSTFQEIAGSKDTVGQYESHTAFSLPGLYRVVNGIDAFDPKFNIVSPGADMTIYFPYMEE--KRRLKHFHSEIE 527 (784)
Q Consensus 450 ~AD~IIt~S~~~~~~~~~~vgqYe~~~~f~~p~l~~~~~gi~~f~~k~~VIpnGvD~~~f~p~~~~--~~rl~~~~~~~~ 527 (784)
.||.|=+.|+..+....+.....-.. -...+......| -.-++.+.|-|||.+.|...... ..+..
T Consensus 179 ~aDlIGFqt~~y~rnFl~~~~~~lg~--~~~~~~~v~~~g---r~v~v~~~PigID~~~~~~~a~~~~~~~~~------- 246 (474)
T PRK10117 179 DYDLLGFQTENDRLAFLDCLSNLTRV--TTRSGKSHTAWG---KAFRTEVYPIGIEPDEIAKQAAGPLPPKLA------- 246 (474)
T ss_pred hCccceeCCHHHHHHHHHHHHHHcCC--cccCCCeEEECC---eEEEEEEEECeEcHHHHHHHhhchHHHHHH-------
Confidence 99999999987765333322111000 000000000011 02257788999998876432111 11111
Q ss_pred HhhcCchhhhhhhccccCCCCCEEEEEecccCCCChHHHHHHHHHhHccCC----CeEEEEEeCCCCCCcccHHHHHHHH
Q 003947 528 ELLYSPVENKEHLCVLKDSSKPILFTMARLDRVKNLTGLVEWYGKNAKLRE----LVNLVVVGGDRRKESKDLEEQAEMK 603 (784)
Q Consensus 528 ~~l~~~~~~~~~~gll~~~~k~iIl~vGRL~~~Kgi~~LieA~~~l~~~~~----~v~LvIVG~g~~~~s~d~ee~~~~~ 603 (784)
..++.+ .++.+|+.+.|+|..||+..=++||.++.+.+| ++.|+-++. ++.+.-.++.+...
T Consensus 247 -------~lr~~~-----~~~~lilgVDRLDytKGi~~rl~Afe~fL~~~Pe~~gkvvlvQia~--psR~~v~~Y~~l~~ 312 (474)
T PRK10117 247 -------QLKAEL-----KNVQNIFSVERLDYSKGLPERFLAYEALLEKYPQHHGKIRYTQIAP--TSRGDVQAYQDIRH 312 (474)
T ss_pred -------HHHHHc-----CCCeEEEEecccccccCHHHHHHHHHHHHHhChhhcCCEEEEEEcC--CCCCccHHHHHHHH
Confidence 112222 357799999999999999999999999877665 466776653 33334455556666
Q ss_pred HHHHHHHhcCC-CCc-----EEEccCcCCcCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCC-----cEEEcCc
Q 003947 604 KMYGLIDTYKL-NGQ-----FRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGL-----PTFATCN 672 (784)
Q Consensus 604 ~l~~li~~l~L-~~~-----V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMA~Gl-----PVIaT~~ 672 (784)
++.+++.+.+- -+. |+++- ..++.+++..+|. ++|+++.++.-+|+-|+..|+.||.. .+|.|..
T Consensus 313 ~v~~~vg~INg~fg~~~w~Pv~y~~---~~~~~~~l~alyr-~ADv~lVTplRDGMNLVAkEyva~q~~~~~GvLILSef 388 (474)
T PRK10117 313 QLETEAGRINGKYGQLGWTPLYYLN---QHFDRKLLMKIFR-YSDVGLVTPLRDGMNLVAKEYVAAQDPANPGVLVLSQF 388 (474)
T ss_pred HHHHHHHHHHhccCCCCceeEEEec---CCCCHHHHHHHHH-hccEEEecccccccccccchheeeecCCCCccEEEecc
Confidence 66666665432 122 44443 4678899999999 49999999999999999999999976 3788999
Q ss_pred cccccccccCceEEEECCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Q 003947 673 GGPAEIIVHGKSGFHIDPYKGDQATGILVDFFEKCKVDPGHWDEISQGGLKRIQEKYTWKIYSERLLNLSG 743 (784)
Q Consensus 673 GG~~EiI~dg~~G~li~p~d~e~lAe~I~~~l~~ll~dp~~~~~m~~~a~~~v~~~ytw~~~a~~ll~ly~ 743 (784)
.|.++.+. ..++++|.|.+++|++|.++++ ..++.+++.-+..++.+ .++|....++.+++-..
T Consensus 389 AGaA~~L~---~AllVNP~d~~~~A~Ai~~AL~---Mp~~Er~~R~~~l~~~v-~~~dv~~W~~~fL~~L~ 452 (474)
T PRK10117 389 AGAANELT---SALIVNPYDRDEVAAALDRALT---MPLAERISRHAEMLDVI-VKNDINHWQECFISDLK 452 (474)
T ss_pred cchHHHhC---CCeEECCCCHHHHHHHHHHHHc---CCHHHHHHHHHHHHHHh-hhCCHHHHHHHHHHHHH
Confidence 99998884 3789999999999999997663 67777777777777777 88999999988887554
No 101
>PF13524 Glyco_trans_1_2: Glycosyl transferases group 1
Probab=99.36 E-value=3.4e-12 Score=113.56 Aligned_cols=92 Identities=20% Similarity=0.369 Sum_probs=84.9
Q ss_pred EEEeCCCCCCCcHHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHH
Q 003947 643 AFVQPALYEAFGLTVVEAMTCGLPTFATCNGGPAEIIVHGKSGFHIDPYKGDQATGILVDFFEKCKVDPGHWDEISQGGL 722 (784)
Q Consensus 643 vfV~PS~~E~fGltvlEAMA~GlPVIaT~~GG~~EiI~dg~~G~li~p~d~e~lAe~I~~~l~~ll~dp~~~~~m~~~a~ 722 (784)
+++.|+...+++..++|+||||+|+|+++.+++.+++.+|..++.++ |++++++++. .+++||+.+++|+++|+
T Consensus 1 i~Ln~~~~~~~~~r~~E~~a~G~~vi~~~~~~~~~~~~~~~~~~~~~--~~~el~~~i~----~ll~~~~~~~~ia~~a~ 74 (92)
T PF13524_consen 1 INLNPSRSDGPNMRIFEAMACGTPVISDDSPGLREIFEDGEHIITYN--DPEELAEKIE----YLLENPEERRRIAKNAR 74 (92)
T ss_pred CEeeCCCCCCCchHHHHHHHCCCeEEECChHHHHHHcCCCCeEEEEC--CHHHHHHHHH----HHHCCHHHHHHHHHHHH
Confidence 35678888999999999999999999999999999999999999997 8999999997 55689999999999999
Q ss_pred HHHHHhCCHHHHHHHHHH
Q 003947 723 KRIQEKYTWKIYSERLLN 740 (784)
Q Consensus 723 ~~v~~~ytw~~~a~~ll~ 740 (784)
+++.++|||+..++++++
T Consensus 75 ~~v~~~~t~~~~~~~il~ 92 (92)
T PF13524_consen 75 ERVLKRHTWEHRAEQILE 92 (92)
T ss_pred HHHHHhCCHHHHHHHHHC
Confidence 999999999999999863
No 102
>PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming]
Probab=99.31 E-value=2.6e-10 Score=138.65 Aligned_cols=331 Identities=13% Similarity=0.109 Sum_probs=213.7
Q ss_pred HHHHHHHHHHHHHcCCCceEEEEcCCChhHHHHHHHHhC-CCcEEEEecCCcccCCCCCcchhhhccccccccchhhhhH
Q 003947 367 TFTEDVATEIIQELQCKPDLIIGNYSDGNIVASLLAHKL-DVTQCTIAHALELTKYPDSDINWKKLDDKYHFSCQFTADL 445 (784)
Q Consensus 367 ~f~~~~~~~i~~~~~~~pDIIh~~~~~~~lva~llar~~-gvp~V~t~H~l~~~k~~~s~~~~~~~~~~y~~~~~~~~e~ 445 (784)
...+..+..+.+.....-|+|..|.....+++..+.++. ..++.+..|..++ .+++ |+.+.+...-+
T Consensus 185 ~vN~~FA~~v~~~~~~~~d~VWVhDYhL~llP~~LR~~~~~~~IgfFlHiPFP----s~ei--------fr~LP~r~eiL 252 (854)
T PLN02205 185 SVNKIFADRIMEVINPEDDFVWIHDYHLMVLPTFLRKRFNRVKLGFFLHSPFP----SSEI--------YKTLPIREELL 252 (854)
T ss_pred HHHHHHHHHHHHHhCCCCCEEEEeCchhhHHHHHHHhhCCCCcEEEEecCCCC----ChHH--------HhhCCcHHHHH
Confidence 333444444544432223899999999888888887654 5778888887543 2322 22222222334
Q ss_pred HHhcccCEEEecChHhHhhccccccccccccccccccceeeecCCCCCC--CceEEecCCCCCCCCCCC---cHHHHhhh
Q 003947 446 FAMNRTDFIITSTFQEIAGSKDTVGQYESHTAFSLPGLYRVVNGIDAFD--PKFNIVSPGADMTIYFPY---MEEKRRLK 520 (784)
Q Consensus 446 ~a~~~AD~IIt~S~~~~~~~~~~vgqYe~~~~f~~p~l~~~~~gi~~f~--~k~~VIpnGvD~~~f~p~---~~~~~rl~ 520 (784)
..|-.||.|=+.|+..+.............. ...++ ...++.+.. -++.+.|-|||...|... ++...+..
T Consensus 253 ~glL~aDlIGFht~~yar~Fl~~~~r~lgl~-~~~~~---g~~~~~~~Gr~v~v~~~PigId~~~~~~~~~~~~~~~~~~ 328 (854)
T PLN02205 253 RALLNSDLIGFHTFDYARHFLSCCSRMLGLS-YESKR---GYIGLEYYGRTVSIKILPVGIHMGQLQSVLSLPETEAKVK 328 (854)
T ss_pred HHHhcCCeEEecCHHHHHHHHHHHHHHhCCc-ccCCC---cceeEEECCcEEEEEEEeCeEcHHHHHHHhcChhHHHHHH
Confidence 5788999999999877653333211110000 00000 001122112 256778999998876432 11111111
Q ss_pred cchhhhHHhhcCchhhhhhhccccCCCCCEEEEEecccCCCChHHHHHHHHHhHccCCCe----EEEEEeCCCCCCcccH
Q 003947 521 HFHSEIEELLYSPVENKEHLCVLKDSSKPILFTMARLDRVKNLTGLVEWYGKNAKLRELV----NLVVVGGDRRKESKDL 596 (784)
Q Consensus 521 ~~~~~~~~~l~~~~~~~~~~gll~~~~k~iIl~vGRL~~~Kgi~~LieA~~~l~~~~~~v----~LvIVG~g~~~~s~d~ 596 (784)
+.+++++ .+++.+|+.+.|+|..||+..=+.||.++.+.+|.+ .|+-+..-. .+...
T Consensus 329 --------------~l~~~~~---~~~~~~ilgVDrlD~~KGi~~kl~A~e~~L~~~P~~~gkvvlvQia~ps--r~~~~ 389 (854)
T PLN02205 329 --------------ELIKQFC---DQDRIMLLGVDDMDIFKGISLKLLAMEQLLMQHPEWQGKVVLVQIANPA--RGKGK 389 (854)
T ss_pred --------------HHHHHhc---cCCCEEEEEccCcccccCHHHHHHHHHHHHHhCccccCCEEEEEEecCC--CcccH
Confidence 1122222 246789999999999999999999999998777754 566555432 23334
Q ss_pred HHHHHHHHHHHHHHhcC----CCC--cEEEccCcCCcCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCC-----
Q 003947 597 EEQAEMKKMYGLIDTYK----LNG--QFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGL----- 665 (784)
Q Consensus 597 ee~~~~~~l~~li~~l~----L~~--~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMA~Gl----- 665 (784)
++.+...++.+++.+.+ -.+ -|.++- ..++.+++..+|+ .||+++.++..+|+-|+..|+.+|..
T Consensus 390 ~y~~~~~ev~~~v~rIN~~fg~~~~~Pv~~~~---~~~~~~e~~aly~-~ADv~lVT~lRDGMNLva~Eyia~~~~~~~~ 465 (854)
T PLN02205 390 DVKEVQAETHSTVKRINETFGKPGYDPIVLID---APLKFYERVAYYV-VAECCLVTAVRDGMNLIPYEYIISRQGNEKL 465 (854)
T ss_pred HHHHHHHHHHHHHHHHHhhcCCCCCceEEEEe---cCCCHHHHHHHHH-hccEEEeccccccccccchheeEEccCcccc
Confidence 45555555666665533 211 255553 3678899999999 49999999999999999999999964
Q ss_pred --------------cEEEcCccccccccccCceEEEECCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCH
Q 003947 666 --------------PTFATCNGGPAEIIVHGKSGFHIDPYKGDQATGILVDFFEKCKVDPGHWDEISQGGLKRIQEKYTW 731 (784)
Q Consensus 666 --------------PVIaT~~GG~~EiI~dg~~G~li~p~d~e~lAe~I~~~l~~ll~dp~~~~~m~~~a~~~v~~~ytw 731 (784)
.+|.|.+.|.+..+. ..++|+|.|.+++|++|.+++. .+++.++..-++.++++ ..+|-
T Consensus 466 ~~~~~~~~~~~~~gvLiLSEfaGaa~~L~---~Ai~VNP~d~~~~a~ai~~AL~---m~~~Er~~R~~~~~~~v-~~~d~ 538 (854)
T PLN02205 466 DKLLGLEPSTPKKSMLVVSEFIGCSPSLS---GAIRVNPWNIDAVADAMDSALE---MAEPEKQLRHEKHYRYV-STHDV 538 (854)
T ss_pred ccccccccccCCCCceEeeeccchhHHhC---cCeEECCCCHHHHHHHHHHHHc---CCHHHHHHHHHHHHHHH-hhCCH
Confidence 367788888887773 3789999999999999997763 56666666666677777 88898
Q ss_pred HHHHHHHHHHHH
Q 003947 732 KIYSERLLNLSG 743 (784)
Q Consensus 732 ~~~a~~ll~ly~ 743 (784)
...++.++.-..
T Consensus 539 ~~W~~~fl~~l~ 550 (854)
T PLN02205 539 GYWARSFLQDLE 550 (854)
T ss_pred HHHHHHHHHHHH
Confidence 888888776443
No 103
>COG0380 OtsA Trehalose-6-phosphate synthase [Carbohydrate transport and metabolism]
Probab=99.25 E-value=1.2e-09 Score=123.70 Aligned_cols=330 Identities=15% Similarity=0.130 Sum_probs=214.4
Q ss_pred HHHHHHHHHHHHHcCCCceEEEEcCCChhHHHHHHHHhC-CCcEEEEecCCcccCCCCCcchhhhccccccccchhhhhH
Q 003947 367 TFTEDVATEIIQELQCKPDLIIGNYSDGNIVASLLAHKL-DVTQCTIAHALELTKYPDSDINWKKLDDKYHFSCQFTADL 445 (784)
Q Consensus 367 ~f~~~~~~~i~~~~~~~pDIIh~~~~~~~lva~llar~~-gvp~V~t~H~l~~~k~~~s~~~~~~~~~~y~~~~~~~~e~ 445 (784)
.+.......+.+..+ .=|+|..|+....+++..+..+. ..++.+..|..+++ +.+ ++.+.+...-.
T Consensus 132 ~vN~~FAd~i~~~~~-~gDiIWVhDYhL~L~P~mlR~~~~~~~IgfFlHiPfPs----sEv--------fr~lP~r~eIl 198 (486)
T COG0380 132 KVNRKFADKIVEIYE-PGDIIWVHDYHLLLVPQMLRERIPDAKIGFFLHIPFPS----SEV--------FRCLPWREEIL 198 (486)
T ss_pred HHHHHHHHHHHHhcC-CCCEEEEEechhhhhHHHHHHhCCCceEEEEEeCCCCC----HHH--------HhhCchHHHHH
Confidence 344444555555433 33999999999888888777664 45777888875432 221 11122222233
Q ss_pred HHhcccCEEEecChHhHhhccccccccccccccccccceeee-cCCCCCCCceEEecCCCCCCCCCCCcHHH---Hhhhc
Q 003947 446 FAMNRTDFIITSTFQEIAGSKDTVGQYESHTAFSLPGLYRVV-NGIDAFDPKFNIVSPGADMTIYFPYMEEK---RRLKH 521 (784)
Q Consensus 446 ~a~~~AD~IIt~S~~~~~~~~~~vgqYe~~~~f~~p~l~~~~-~gi~~f~~k~~VIpnGvD~~~f~p~~~~~---~rl~~ 521 (784)
..+-.||.|=..++..+....+...+... ++ +.-.+. .|.+-...++...|-|+|...|....... .++.+
T Consensus 199 ~gll~~dligFqt~~y~~nF~~~~~r~~~---~~--~~~~~~~~~~~~~~v~v~a~PIgID~~~~~~~~~~~~v~~~~~e 273 (486)
T COG0380 199 EGLLGADLIGFQTESYARNFLDLCSRLLG---VT--GDADIRFNGADGRIVKVGAFPIGIDPEEFERALKSPSVQEKVLE 273 (486)
T ss_pred HHhhcCCeeEecCHHHHHHHHHHHHHhcc---cc--ccccccccccCCceEEEEEEeeecCHHHHHHhhcCCchhhHHHH
Confidence 47889999999998777644443322110 00 000000 11110123566789999987664321110 11111
Q ss_pred chhhhHHhhcCchhhhhhhccccCCCCCEEEEEecccCCCChHHHHHHHHHhHccCC----CeEEEEEeCCCCCCcccHH
Q 003947 522 FHSEIEELLYSPVENKEHLCVLKDSSKPILFTMARLDRVKNLTGLVEWYGKNAKLRE----LVNLVVVGGDRRKESKDLE 597 (784)
Q Consensus 522 ~~~~~~~~l~~~~~~~~~~gll~~~~k~iIl~vGRL~~~Kgi~~LieA~~~l~~~~~----~v~LvIVG~g~~~~s~d~e 597 (784)
.++.+ ..++.+|+.+.|+|..||+..=+.|+.++.+.+| ++.|+-++.... ..-.+
T Consensus 274 --------------l~~~~----~~~~kiivgvDRlDy~kGi~~rl~Afe~lL~~~Pe~~~kvvliQi~~pSr--~~v~~ 333 (486)
T COG0380 274 --------------LKAEL----GRNKKLIVGVDRLDYSKGIPQRLLAFERLLEEYPEWRGKVVLLQIAPPSR--EDVEE 333 (486)
T ss_pred --------------HHHHh----cCCceEEEEehhcccccCcHHHHHHHHHHHHhChhhhCceEEEEecCCCc--cccHH
Confidence 11112 2348899999999999999999999999987665 456666665433 33344
Q ss_pred HHHHHHHHHHHHHhcC-CCCcEEEcc--CcCCcCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCC----cEEEc
Q 003947 598 EQAEMKKMYGLIDTYK-LNGQFRWIS--SQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGL----PTFAT 670 (784)
Q Consensus 598 e~~~~~~l~~li~~l~-L~~~V~flG--~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMA~Gl----PVIaT 670 (784)
++.....+.+++.+.+ .-+++.|.+ +-...++..++..++.. +|+++.+++-+|+-++..|+.||-- |.|-|
T Consensus 334 y~~~~~~i~~~V~rIN~~fG~~~~~Pv~~l~~~~~~~~l~al~~~-aDv~lVtplrDGMNLvakEyVa~q~~~~G~LiLS 412 (486)
T COG0380 334 YQALRLQIEELVGRINGEFGSLSWTPVHYLHRDLDRNELLALYRA-ADVMLVTPLRDGMNLVAKEYVAAQRDKPGVLILS 412 (486)
T ss_pred HHHHHHHHHHHHHHHHhhcCCCCcceeEEEeccCCHHHHHHHHhh-hceeeeccccccccHHHHHHHHhhcCCCCcEEEe
Confidence 4445555666665543 234444433 11235788999999995 9999999999999999999999854 88889
Q ss_pred CccccccccccCceEEEECCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Q 003947 671 CNGGPAEIIVHGKSGFHIDPYKGDQATGILVDFFEKCKVDPGHWDEISQGGLKRIQEKYTWKIYSERLLNLS 742 (784)
Q Consensus 671 ~~GG~~EiI~dg~~G~li~p~d~e~lAe~I~~~l~~ll~dp~~~~~m~~~a~~~v~~~ytw~~~a~~ll~ly 742 (784)
.+.|.+..+.+ .++++|.|.+++|++|..++. .+++.+++.-+..++.+ .++|-...+..++.-.
T Consensus 413 eFaGaa~~L~~---AliVNP~d~~~va~ai~~AL~---m~~eEr~~r~~~~~~~v-~~~d~~~W~~~fl~~l 477 (486)
T COG0380 413 EFAGAASELRD---ALIVNPWDTKEVADAIKRALT---MSLEERKERHEKLLKQV-LTHDVARWANSFLDDL 477 (486)
T ss_pred ccccchhhhcc---CEeECCCChHHHHHHHHHHhc---CCHHHHHHHHHHHHHHH-HhhhHHHHHHHHHHHH
Confidence 99998888755 789999999999999997663 67777777666777776 8888888888866543
No 104
>PRK12446 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; Reviewed
Probab=99.24 E-value=4.5e-09 Score=116.77 Aligned_cols=323 Identities=14% Similarity=0.097 Sum_probs=169.8
Q ss_pred CcccchhhhHHHHHHHHHHHHHHHHHcCCCcccceEEEecCCCCCCCCCcCcceeeecCcCCeEEEEccCCCCccccccc
Q 003947 276 DTGGQVVYILDQVRALENEMLLRIKQQGLDITPRILIITRLLPDAVGTTCGQRVEKVYGTKYSDILRVPFRTEEGIVRKW 355 (784)
Q Consensus 276 ~tGG~~vyv~d~~raLe~eLa~~L~~~GheV~~~i~VvTr~~~~~~g~~~~~~~e~v~~~~~v~IlrvP~~~~~~~~~~~ 355 (784)
.|||-..-.+ .++++|.++||+|. ++++...-. .. .....++.+..++.....
T Consensus 10 GTGGHi~Pal--------a~a~~l~~~g~~v~----~vg~~~~~e------~~---l~~~~g~~~~~~~~~~l~------ 62 (352)
T PRK12446 10 GSAGHVTPNL--------AIIPYLKEDNWDIS----YIGSHQGIE------KT---IIEKENIPYYSISSGKLR------ 62 (352)
T ss_pred CcHHHHHHHH--------HHHHHHHhCCCEEE----EEECCCccc------cc---cCcccCCcEEEEeccCcC------
Confidence 5788766666 67777888999998 777543211 01 111113444444432211
Q ss_pred ccccCChh---hHHHHHHHHHHHHHHHcCCCceEEEEcCCChhHHHHHHHHhCCCcEEEEecCCcccCCCCCcchhhhcc
Q 003947 356 ISRFEVWP---YLETFTEDVATEIIQELQCKPDLIIGNYSDGNIVASLLAHKLDVTQCTIAHALELTKYPDSDINWKKLD 432 (784)
Q Consensus 356 isr~~l~~---yl~~f~~~~~~~i~~~~~~~pDIIh~~~~~~~lva~llar~~gvp~V~t~H~l~~~k~~~s~~~~~~~~ 432 (784)
+...+. ..-.+.....+.+.-..+.+||+||++....+..+.++++.+++|++. |.-... + .
T Consensus 63 --~~~~~~~~~~~~~~~~~~~~~~~i~~~~kPdvvi~~Ggy~s~p~~~aa~~~~~p~~i--~e~n~~--~--g------- 127 (352)
T PRK12446 63 --RYFDLKNIKDPFLVMKGVMDAYVRIRKLKPDVIFSKGGFVSVPVVIGGWLNRVPVLL--HESDMT--P--G------- 127 (352)
T ss_pred --CCchHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEecCchhhHHHHHHHHHcCCCEEE--ECCCCC--c--c-------
Confidence 110111 111111111111111125699999998777777788999999999764 432110 0 0
Q ss_pred ccccccchhhhhHHHhcccCEEEecChHhHhhccccccccccccccccccceeeecCCCCCCCceEEecCCCCCCCCCCC
Q 003947 433 DKYHFSCQFTADLFAMNRTDFIITSTFQEIAGSKDTVGQYESHTAFSLPGLYRVVNGIDAFDPKFNIVSPGADMTIYFPY 512 (784)
Q Consensus 433 ~~y~~~~~~~~e~~a~~~AD~IIt~S~~~~~~~~~~vgqYe~~~~f~~p~l~~~~~gi~~f~~k~~VIpnGvD~~~f~p~ 512 (784)
.+-++..+.||.|.++-+.... +++ ..|+.++.|.+..+...+.
T Consensus 128 ---------~~nr~~~~~a~~v~~~f~~~~~-------------------------~~~--~~k~~~tG~Pvr~~~~~~~ 171 (352)
T PRK12446 128 ---------LANKIALRFASKIFVTFEEAAK-------------------------HLP--KEKVIYTGSPVREEVLKGN 171 (352)
T ss_pred ---------HHHHHHHHhhCEEEEEccchhh-------------------------hCC--CCCeEEECCcCCccccccc
Confidence 1123567788888665432211 122 3577788787766543222
Q ss_pred cHHHHhhhcchhhhHHhhcCchhhhhhhccccCCCCCEEEEEec-ccCCCChHH-HHHHHHHhHccCCCeEEEEEeCCCC
Q 003947 513 MEEKRRLKHFHSEIEELLYSPVENKEHLCVLKDSSKPILFTMAR-LDRVKNLTG-LVEWYGKNAKLRELVNLVVVGGDRR 590 (784)
Q Consensus 513 ~~~~~rl~~~~~~~~~~l~~~~~~~~~~gll~~~~k~iIl~vGR-L~~~Kgi~~-LieA~~~l~~~~~~v~LvIVG~g~~ 590 (784)
... .++.+|+ ++++++|+.+|. .. .+.+.. +.+++..+. .+++++++.|..+
T Consensus 172 ~~~--------------------~~~~~~l--~~~~~~iLv~GGS~G-a~~in~~~~~~l~~l~---~~~~vv~~~G~~~ 225 (352)
T PRK12446 172 REK--------------------GLAFLGF--SRKKPVITIMGGSLG-AKKINETVREALPELL---LKYQIVHLCGKGN 225 (352)
T ss_pred chH--------------------HHHhcCC--CCCCcEEEEECCccc-hHHHHHHHHHHHHhhc---cCcEEEEEeCCch
Confidence 111 1233554 566777776654 43 344433 333444443 2477776655421
Q ss_pred CCcccHHHHHHHHHHHHHHHhcCCCCcEEEccCcCCcCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEc
Q 003947 591 KESKDLEEQAEMKKMYGLIDTYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFAT 670 (784)
Q Consensus 591 ~~s~d~ee~~~~~~l~~li~~l~L~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMA~GlPVIaT 670 (784)
+.+....+ .++...++. .+++..+|+. +|++|.= +=+.|+.|++++|+|.|..
T Consensus 226 --------------~~~~~~~~---~~~~~~~f~-----~~~m~~~~~~-adlvIsr----~G~~t~~E~~~~g~P~I~i 278 (352)
T PRK12446 226 --------------LDDSLQNK---EGYRQFEYV-----HGELPDILAI-TDFVISR----AGSNAIFEFLTLQKPMLLI 278 (352)
T ss_pred --------------HHHHHhhc---CCcEEecch-----hhhHHHHHHh-CCEEEEC----CChhHHHHHHHcCCCEEEE
Confidence 11111111 123344532 1367788884 9988874 3477899999999999987
Q ss_pred Ccc-----c----cccccccCceEEEECCC--CHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHH
Q 003947 671 CNG-----G----PAEIIVHGKSGFHIDPY--KGDQATGILVDFFEKCKVDPGHWDEISQGGLKRIQEKYTWKIYSERLL 739 (784)
Q Consensus 671 ~~G-----G----~~EiI~dg~~G~li~p~--d~e~lAe~I~~~l~~ll~dp~~~~~m~~~a~~~v~~~ytw~~~a~~ll 739 (784)
... + ..+.+.+-..|..+... +++.+++.+. .++.|++.+++ ..+++....-++++.
T Consensus 279 P~~~~~~~~~Q~~Na~~l~~~g~~~~l~~~~~~~~~l~~~l~----~ll~~~~~~~~--------~~~~~~~~~aa~~i~ 346 (352)
T PRK12446 279 PLSKFASRGDQILNAESFERQGYASVLYEEDVTVNSLIKHVE----ELSHNNEKYKT--------ALKKYNGKEAIQTII 346 (352)
T ss_pred cCCCCCCCchHHHHHHHHHHCCCEEEcchhcCCHHHHHHHHH----HHHcCHHHHHH--------HHHHcCCCCHHHHHH
Confidence 442 1 12233344456666433 3566666665 55678765432 113344445555544
Q ss_pred HH
Q 003947 740 NL 741 (784)
Q Consensus 740 ~l 741 (784)
++
T Consensus 347 ~~ 348 (352)
T PRK12446 347 DH 348 (352)
T ss_pred HH
Confidence 43
No 105
>COG0707 MurG UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase [Cell envelope biogenesis, outer membrane]
Probab=99.23 E-value=2.3e-08 Score=110.79 Aligned_cols=252 Identities=12% Similarity=0.124 Sum_probs=152.8
Q ss_pred CCCceEEEEcCCChhHHHHHHHHhCCCcEEEEecCCcccCCCCCcchhhhccccccccchhhhhHHHhcccCEEEecChH
Q 003947 381 QCKPDLIIGNYSDGNIVASLLAHKLDVTQCTIAHALELTKYPDSDINWKKLDDKYHFSCQFTADLFAMNRTDFIITSTFQ 460 (784)
Q Consensus 381 ~~~pDIIh~~~~~~~lva~llar~~gvp~V~t~H~l~~~k~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~~ 460 (784)
..+||+|++.....+..+.+++..+++|++..-.+.-. ...|+ +..+.|+.|.+.-..
T Consensus 89 ~~kPd~vig~Ggyvs~P~~~Aa~~~~iPv~ihEqn~~~------G~ank----------------~~~~~a~~V~~~f~~ 146 (357)
T COG0707 89 KLKPDVVIGTGGYVSGPVGIAAKLLGIPVIIHEQNAVP------GLANK----------------ILSKFAKKVASAFPK 146 (357)
T ss_pred HcCCCEEEecCCccccHHHHHHHhCCCCEEEEecCCCc------chhHH----------------HhHHhhceeeecccc
Confidence 45999999988777788889999999998865554322 11222 345566766443322
Q ss_pred hHhhccccccccccccccccccceeeecCCCCCCCceEEecCCCCCCCCCCCcHHHHhhhcchhhhHHhhcCchhhhhhh
Q 003947 461 EIAGSKDTVGQYESHTAFSLPGLYRVVNGIDAFDPKFNIVSPGADMTIYFPYMEEKRRLKHFHSEIEELLYSPVENKEHL 540 (784)
Q Consensus 461 ~~~~~~~~vgqYe~~~~f~~p~l~~~~~gi~~f~~k~~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~~ 540 (784)
.. .+.+ +.++.++.|.+..+... .+....+. .
T Consensus 147 -~~------------------------~~~~--~~~~~~tG~Pvr~~~~~-~~~~~~~~--------------------~ 178 (357)
T COG0707 147 -LE------------------------AGVK--PENVVVTGIPVRPEFEE-LPAAEVRK--------------------D 178 (357)
T ss_pred -cc------------------------ccCC--CCceEEecCcccHHhhc-cchhhhhh--------------------h
Confidence 11 1122 55788888888776554 22222111 1
Q ss_pred ccccCCCCCEEEEEec-ccCCCChHHHH-HHHHHhHccCCCeEEEEEeCCCCCCcccHHHHHHHHHHHHHHHhcCCCCcE
Q 003947 541 CVLKDSSKPILFTMAR-LDRVKNLTGLV-EWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYGLIDTYKLNGQF 618 (784)
Q Consensus 541 gll~~~~k~iIl~vGR-L~~~Kgi~~Li-eA~~~l~~~~~~v~LvIVG~g~~~~s~d~ee~~~~~~l~~li~~l~L~~~V 618 (784)
+ ..++++|+.+|. .+..+ +..++ ++...+.+ +++++..+|... .+++...-.+++. +
T Consensus 179 ~---~~~~~~ilV~GGS~Ga~~-ln~~v~~~~~~l~~---~~~v~~~~G~~~-----------~~~~~~~~~~~~~---~ 237 (357)
T COG0707 179 G---RLDKKTILVTGGSQGAKA-LNDLVPEALAKLAN---RIQVIHQTGKND-----------LEELKSAYNELGV---V 237 (357)
T ss_pred c---cCCCcEEEEECCcchhHH-HHHHHHHHHHHhhh---CeEEEEEcCcch-----------HHHHHHHHhhcCc---E
Confidence 1 125677666664 44333 33333 33333332 577777666521 2334444444443 7
Q ss_pred EEccCcCCcCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcCcccc--------ccccccCceEEEECC
Q 003947 619 RWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCNGGP--------AEIIVHGKSGFHIDP 690 (784)
Q Consensus 619 ~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMA~GlPVIaT~~GG~--------~EiI~dg~~G~li~p 690 (784)
+..++.. ++.++|+. +|++|.=+ =++|+.|..++|+|+|--..+.. +..+++-..|.+++.
T Consensus 238 ~v~~f~~------dm~~~~~~-ADLvIsRa----Ga~Ti~E~~a~g~P~IliP~p~~~~~~Q~~NA~~l~~~gaa~~i~~ 306 (357)
T COG0707 238 RVLPFID------DMAALLAA-ADLVISRA----GALTIAELLALGVPAILVPYPPGADGHQEYNAKFLEKAGAALVIRQ 306 (357)
T ss_pred EEeeHHh------hHHHHHHh-ccEEEeCC----cccHHHHHHHhCCCEEEeCCCCCccchHHHHHHHHHhCCCEEEecc
Confidence 7777544 58888885 99999743 36899999999999999754433 333444456777765
Q ss_pred CC--HHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHH
Q 003947 691 YK--GDQATGILVDFFEKCKVDPGHWDEISQGGLKRIQEKYTWKIYSERLL 739 (784)
Q Consensus 691 ~d--~e~lAe~I~~~l~~ll~dp~~~~~m~~~a~~~v~~~ytw~~~a~~ll 739 (784)
.+ ++.+++.|. .++++|+..++|++++++.. ..-.-+.+++.++
T Consensus 307 ~~lt~~~l~~~i~----~l~~~~~~l~~m~~~a~~~~-~p~aa~~i~~~~~ 352 (357)
T COG0707 307 SELTPEKLAELIL----RLLSNPEKLKAMAENAKKLG-KPDAAERIADLLL 352 (357)
T ss_pred ccCCHHHHHHHHH----HHhcCHHHHHHHHHHHHhcC-CCCHHHHHHHHHH
Confidence 55 667777776 55689999999999988764 3333344444433
No 106
>PF13579 Glyco_trans_4_4: Glycosyl transferase 4-like domain; PDB: 3C4Q_B 3C4V_A 3C48_B 1Z2T_A.
Probab=99.22 E-value=1.5e-11 Score=118.01 Aligned_cols=160 Identities=15% Similarity=0.250 Sum_probs=84.7
Q ss_pred ccchhhhHHHHHHHHHHHHHHHHHcCCCcccceEEEecCCCCCCCCCcCcceeeecCcCCeEEEEccCCCCccccccccc
Q 003947 278 GGQVVYILDQVRALENEMLLRIKQQGLDITPRILIITRLLPDAVGTTCGQRVEKVYGTKYSDILRVPFRTEEGIVRKWIS 357 (784)
Q Consensus 278 GG~~vyv~d~~raLe~eLa~~L~~~GheV~~~i~VvTr~~~~~~g~~~~~~~e~v~~~~~v~IlrvP~~~~~~~~~~~is 357 (784)
||.+.++. +|+++|.++||+|+ |+|...+.. ..+ ....++.+.++|+.......
T Consensus 1 GG~~~~~~--------~l~~~L~~~G~~V~----v~~~~~~~~-------~~~--~~~~~~~~~~~~~~~~~~~~----- 54 (160)
T PF13579_consen 1 GGIERYVR--------ELARALAARGHEVT----VVTPQPDPE-------DDE--EEEDGVRVHRLPLPRRPWPL----- 54 (160)
T ss_dssp SHHHHHHH--------HHHHHHHHTT-EEE----EEEE---GG-------G-S--EEETTEEEEEE--S-SSSGG-----
T ss_pred CCHHHHHH--------HHHHHHHHCCCEEE----EEecCCCCc-------ccc--cccCCceEEeccCCccchhh-----
Confidence 89999999 66667799999999 998664332 111 11236888888876542111
Q ss_pred ccCChhhHHHHHHHHHHHHHHHcCCCceEEEEcCCChhHHHHHHHHhCCCcEEEEecCCcccCCCCCcchhhhccccccc
Q 003947 358 RFEVWPYLETFTEDVATEIIQELQCKPDLIIGNYSDGNIVASLLAHKLDVTQCTIAHALELTKYPDSDINWKKLDDKYHF 437 (784)
Q Consensus 358 r~~l~~yl~~f~~~~~~~i~~~~~~~pDIIh~~~~~~~lva~llar~~gvp~V~t~H~l~~~k~~~s~~~~~~~~~~y~~ 437 (784)
..+..+ ..+.+.+ .....+||+||+|++..++++.++++..++|+|.+.|+..... ...|. ..+
T Consensus 55 --~~~~~~----~~~~~~l-~~~~~~~Dvv~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~----~~~~~-----~~~ 118 (160)
T PF13579_consen 55 --RLLRFL----RRLRRLL-AARRERPDVVHAHSPTAGLVAALARRRRGIPLVVTVHGTLFRR----GSRWK-----RRL 118 (160)
T ss_dssp --GHCCHH----HHHHHHC-HHCT---SEEEEEHHHHHHHHHHHHHHHT--EEEE-SS-T----------HH-----HHH
T ss_pred --hhHHHH----HHHHHHH-hhhccCCeEEEecccchhHHHHHHHHccCCcEEEEECCCchhh----ccchh-----hHH
Confidence 011111 1222222 2236799999999976667777777678999999999853211 01111 111
Q ss_pred cchhhhhHHHhcccCEEEecChHhHhhccccccccccccccccccceeeecCCCCCCCceEEecCC
Q 003947 438 SCQFTADLFAMNRTDFIITSTFQEIAGSKDTVGQYESHTAFSLPGLYRVVNGIDAFDPKFNIVSPG 503 (784)
Q Consensus 438 ~~~~~~e~~a~~~AD~IIt~S~~~~~~~~~~vgqYe~~~~f~~p~l~~~~~gi~~f~~k~~VIpnG 503 (784)
. ...+...++.||.|+++|+..++.+.+ .|++ .+|+.|||||
T Consensus 119 ~--~~~~~~~~~~ad~vi~~S~~~~~~l~~--------------------~g~~--~~ri~vipnG 160 (160)
T PF13579_consen 119 Y--RWLERRLLRRADRVIVVSEAMRRYLRR--------------------YGVP--PDRIHVIPNG 160 (160)
T ss_dssp H--HHHHHHHHHH-SEEEESSHHHHHHHHH--------------------H-----GGGEEE----
T ss_pred H--HHHHHHHHhcCCEEEECCHHHHHHHHH--------------------hCCC--CCcEEEeCcC
Confidence 1 123667899999999999988773222 3444 7899999998
No 107
>PF13439 Glyco_transf_4: Glycosyltransferase Family 4; PDB: 2JJM_E 3MBO_C 2GEJ_A 2GEK_A.
Probab=99.22 E-value=6e-11 Score=115.74 Aligned_cols=168 Identities=17% Similarity=0.240 Sum_probs=84.0
Q ss_pred CCcccchhhhHHHHHHHHHHHHHHHHHcCCCcccceEEEecCCCCCCCCCcCcceeeecCcCCeEEEEccCCCCcccccc
Q 003947 275 PDTGGQVVYILDQVRALENEMLLRIKQQGLDITPRILIITRLLPDAVGTTCGQRVEKVYGTKYSDILRVPFRTEEGIVRK 354 (784)
Q Consensus 275 p~tGG~~vyv~d~~raLe~eLa~~L~~~GheV~~~i~VvTr~~~~~~g~~~~~~~e~v~~~~~v~IlrvP~~~~~~~~~~ 354 (784)
+..||.+.++. +|+++|+++||+|+ |+|....+..... . .......+.....
T Consensus 9 ~~~GG~e~~~~--------~l~~~l~~~G~~v~----v~~~~~~~~~~~~----~-------~~~~~~~~~~~~~----- 60 (177)
T PF13439_consen 9 PNIGGAERVVL--------NLARALAKRGHEVT----VVSPGVKDPIEEE----L-------VKIFVKIPYPIRK----- 60 (177)
T ss_dssp TSSSHHHHHHH--------HHHHHHHHTT-EEE----EEESS-TTS-SST----E-------EEE---TT-SSTS-----
T ss_pred CCCChHHHHHH--------HHHHHHHHCCCEEE----EEEcCCCccchhh----c-------cceeeeeeccccc-----
Confidence 45799999999 66666799999999 8886644322111 0 0111111111100
Q ss_pred cccccCChhhHHHHHHHHHHHHHHHcCCCceEEEEcCCChhHHHHHHHHhCCCcEEEEecCCccc-CCCCCcchhhhccc
Q 003947 355 WISRFEVWPYLETFTEDVATEIIQELQCKPDLIIGNYSDGNIVASLLAHKLDVTQCTIAHALELT-KYPDSDINWKKLDD 433 (784)
Q Consensus 355 ~isr~~l~~yl~~f~~~~~~~i~~~~~~~pDIIh~~~~~~~lva~llar~~gvp~V~t~H~l~~~-k~~~s~~~~~~~~~ 433 (784)
...+.......+.+.+.+. +|||||+|.+.....+....+ ++|.|.+.|+.... ..... ...
T Consensus 61 ------~~~~~~~~~~~~~~~i~~~---~~DiVh~~~~~~~~~~~~~~~--~~~~v~~~H~~~~~~~~~~~------~~~ 123 (177)
T PF13439_consen 61 ------RFLRSFFFMRRLRRLIKKE---KPDIVHIHGPPAFWIALLACR--KVPIVYTIHGPYFERRFLKS------KLS 123 (177)
T ss_dssp ------S--HHHHHHHHHHHHHHHH---T-SEEECCTTHCCCHHHHHHH--CSCEEEEE-HHH--HHTTTT------SCC
T ss_pred ------ccchhHHHHHHHHHHHHHc---CCCeEEecccchhHHHHHhcc--CCCEEEEeCCCccccccccc------ccc
Confidence 0011111222334444433 899999998765444444444 99999999986521 00000 000
Q ss_pred cccccchhhhhHHHhcccCEEEecChHhHhhccccccccccccccccccceeeecCCCCCCCceEEecCCCCCCCCC
Q 003947 434 KYHFSCQFTADLFAMNRTDFIITSTFQEIAGSKDTVGQYESHTAFSLPGLYRVVNGIDAFDPKFNIVSPGADMTIYF 510 (784)
Q Consensus 434 ~y~~~~~~~~e~~a~~~AD~IIt~S~~~~~~~~~~vgqYe~~~~f~~p~l~~~~~gi~~f~~k~~VIpnGvD~~~f~ 510 (784)
.+..... .......+.+|.+|++|...++.+.+ .|++ +.|+.|||||||.+.|.
T Consensus 124 ~~~~~~~-~~~~~~~~~~~~ii~vS~~~~~~l~~--------------------~~~~--~~ki~vI~ngid~~~F~ 177 (177)
T PF13439_consen 124 PYSYLNF-RIERKLYKKADRIIAVSESTKDELIK--------------------FGIP--PEKIHVIYNGIDTDRFR 177 (177)
T ss_dssp CHHHHHH-CTTHHHHCCSSEEEESSHHHHHHHHH--------------------HT----SS-EEE----B-CCCH-
T ss_pred hhhhhhh-hhhhhHHhcCCEEEEECHHHHHHHHH--------------------hCCc--ccCCEEEECCccHHHcC
Confidence 0000000 11233478999999999988874332 3444 68999999999998873
No 108
>TIGR02919 accessory Sec system glycosyltransferase GtfB. Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus.
Probab=99.14 E-value=5.2e-09 Score=118.98 Aligned_cols=143 Identities=11% Similarity=0.080 Sum_probs=109.6
Q ss_pred CCEEEEEecccCCCChHHHHHHHHHhHccCCCeEEEEEeCCCCCCcccHHHHHHHHHHHHHHHhcCCCCcEEEccCcCCc
Q 003947 548 KPILFTMARLDRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYGLIDTYKLNGQFRWISSQMNR 627 (784)
Q Consensus 548 k~iIl~vGRL~~~Kgi~~LieA~~~l~~~~~~v~LvIVG~g~~~~s~d~ee~~~~~~l~~li~~l~L~~~V~flG~~~~~ 627 (784)
+.-+++++. +..+++++++.+..|+++|.| |.+.+ ...+|.++ +++ ++.+.+.|..+
T Consensus 282 ~~~~l~~t~-------s~~I~~i~~Lv~~lPd~~f~I-ga~te----------~s~kL~~L-~~y--~nvvly~~~~~-- 338 (438)
T TIGR02919 282 RKQALILTN-------SDQIEHLEEIVQALPDYHFHI-AALTE----------MSSKLMSL-DKY--DNVKLYPNITT-- 338 (438)
T ss_pred cccEEEECC-------HHHHHHHHHHHHhCCCcEEEE-EecCc----------ccHHHHHH-Hhc--CCcEEECCcCh--
Confidence 344566661 999999999999899999999 66643 01567777 666 56667766433
Q ss_pred CChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcCcc-ccccccccCceEEEECCCCHHHHHHHHHHHHHH
Q 003947 628 VRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCNG-GPAEIIVHGKSGFHIDPYKGDQATGILVDFFEK 706 (784)
Q Consensus 628 v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMA~GlPVIaT~~G-G~~EiI~dg~~G~li~p~d~e~lAe~I~~~l~~ 706 (784)
..+-+++.+ ||+++-.|..|+|++++.||++.|+|+++.+.- |+.+++.+ |.+++++|+++++++|.+
T Consensus 339 ---~~l~~ly~~-~dlyLdin~~e~~~~al~eA~~~G~pI~afd~t~~~~~~i~~---g~l~~~~~~~~m~~~i~~---- 407 (438)
T TIGR02919 339 ---QKIQELYQT-CDIYLDINHGNEILNAVRRAFEYNLLILGFEETAHNRDFIAS---ENIFEHNEVDQLISKLKD---- 407 (438)
T ss_pred ---HHHHHHHHh-ccEEEEccccccHHHHHHHHHHcCCcEEEEecccCCcccccC---CceecCCCHHHHHHHHHH----
Confidence 356677775 999999999999999999999999999998444 66788766 889999999999999984
Q ss_pred hcCCHHHHHHHHHHHHHH
Q 003947 707 CKVDPGHWDEISQGGLKR 724 (784)
Q Consensus 707 ll~dp~~~~~m~~~a~~~ 724 (784)
++.||+.+++.-..-++.
T Consensus 408 lL~d~~~~~~~~~~q~~~ 425 (438)
T TIGR02919 408 LLNDPNQFRELLEQQREH 425 (438)
T ss_pred HhcCHHHHHHHHHHHHHH
Confidence 458997766654444443
No 109
>cd03784 GT1_Gtf_like This family includes the Gtfs, a group of homologous glycosyltransferases involved in the final stages of the biosynthesis of antibiotics vancomycin and related chloroeremomycin. Gtfs transfer sugar moieties from an activated NDP-sugar donor to the oxidatively cross-linked heptapeptide core of vancomycin group antibiotics. The core structure is important for the bioactivity of the antibiotics.
Probab=98.95 E-value=2.1e-07 Score=104.71 Aligned_cols=135 Identities=16% Similarity=0.070 Sum_probs=82.9
Q ss_pred CCCCCEEEEEecccC---CCChHHHHHHHHHhHccCCCeEEEE-EeCCCCCCcccHHHHHHHHHHHHHHHhcCCCCcEEE
Q 003947 545 DSSKPILFTMARLDR---VKNLTGLVEWYGKNAKLRELVNLVV-VGGDRRKESKDLEEQAEMKKMYGLIDTYKLNGQFRW 620 (784)
Q Consensus 545 ~~~k~iIl~vGRL~~---~Kgi~~LieA~~~l~~~~~~v~LvI-VG~g~~~~s~d~ee~~~~~~l~~li~~l~L~~~V~f 620 (784)
+.+++++++.|.... .+-...+++++..+ +.++++ +|..... ...+.++|.+
T Consensus 237 ~~~~~v~v~~Gs~~~~~~~~~~~~~~~a~~~~-----~~~~i~~~g~~~~~-------------------~~~~~~~v~~ 292 (401)
T cd03784 237 AGRPPVYVGFGSMVVRDPEALARLDVEAVATL-----GQRAILSLGWGGLG-------------------AEDLPDNVRV 292 (401)
T ss_pred CCCCcEEEeCCCCcccCHHHHHHHHHHHHHHc-----CCeEEEEccCcccc-------------------ccCCCCceEE
Confidence 345567788888754 23334455555443 345444 4443221 0245688999
Q ss_pred ccCcCCcCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcCccc----cccccccCceEEEECCC--CHH
Q 003947 621 ISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCNGG----PAEIIVHGKSGFHIDPY--KGD 694 (784)
Q Consensus 621 lG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMA~GlPVIaT~~GG----~~EiI~dg~~G~li~p~--d~e 694 (784)
.+ .++..+++ . .+|++|.- -| ..|+.||+++|+|+|+....+ .++.+.....|..+++. +.+
T Consensus 293 ~~----~~p~~~ll---~-~~d~~I~h---gG-~~t~~eal~~GvP~v~~P~~~dQ~~~a~~~~~~G~g~~l~~~~~~~~ 360 (401)
T cd03784 293 VD----FVPHDWLL---P-RCAAVVHH---GG-AGTTAAALRAGVPQLVVPFFGDQPFWAARVAELGAGPALDPRELTAE 360 (401)
T ss_pred eC----CCCHHHHh---h-hhheeeec---CC-chhHHHHHHcCCCEEeeCCCCCcHHHHHHHHHCCCCCCCCcccCCHH
Confidence 98 56655554 4 48999964 23 479999999999999986655 24445555578777665 567
Q ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHH
Q 003947 695 QATGILVDFFEKCKVDPGHWDEISQG 720 (784)
Q Consensus 695 ~lAe~I~~~l~~ll~dp~~~~~m~~~ 720 (784)
++++++.+ +++++ .+++..+.
T Consensus 361 ~l~~al~~----~l~~~-~~~~~~~~ 381 (401)
T cd03784 361 RLAAALRR----LLDPP-SRRRAAAL 381 (401)
T ss_pred HHHHHHHH----HhCHH-HHHHHHHH
Confidence 77777764 44543 44444433
No 110
>PF13528 Glyco_trans_1_3: Glycosyl transferase family 1
Probab=98.86 E-value=2.4e-07 Score=100.83 Aligned_cols=116 Identities=15% Similarity=0.163 Sum_probs=78.8
Q ss_pred CCCCEEEEEecccCCCChHHHHHHHHHhHccCCCeEEEEEeCCCCCCcccHHHHHHHHHHHHHHHhcCCCCcEEEccCcC
Q 003947 546 SSKPILFTMARLDRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYGLIDTYKLNGQFRWISSQM 625 (784)
Q Consensus 546 ~~k~iIl~vGRL~~~Kgi~~LieA~~~l~~~~~~v~LvIVG~g~~~~s~d~ee~~~~~~l~~li~~l~L~~~V~flG~~~ 625 (784)
+.+.+++++|..+.. .++++++.+ ++..++++|....+ .-.++|++.++.
T Consensus 191 ~~~~iLv~~gg~~~~----~~~~~l~~~----~~~~~~v~g~~~~~---------------------~~~~ni~~~~~~- 240 (318)
T PF13528_consen 191 DEPKILVYFGGGGPG----DLIEALKAL----PDYQFIVFGPNAAD---------------------PRPGNIHVRPFS- 240 (318)
T ss_pred CCCEEEEEeCCCcHH----HHHHHHHhC----CCCeEEEEcCCccc---------------------ccCCCEEEeecC-
Confidence 456688999987665 666766664 56889999765210 116789988643
Q ss_pred CcCChhHHHHHHHccccEEEeCCCCCCCcHH-HHHHHHcCCcEEEcCcccccc------ccccCceEEEECCC--CHHHH
Q 003947 626 NRVRNGELYRYICDTKGAFVQPALYEAFGLT-VVEAMTCGLPTFATCNGGPAE------IIVHGKSGFHIDPY--KGDQA 696 (784)
Q Consensus 626 ~~v~~~el~~~la~aadvfV~PS~~E~fGlt-vlEAMA~GlPVIaT~~GG~~E------iI~dg~~G~li~p~--d~e~l 696 (784)
..++.++|+. ||++|.-+ |.+ +.||+++|+|+++-...+..| .+++-..|..+++. +++.+
T Consensus 241 ----~~~~~~~m~~-ad~vIs~~-----G~~t~~Ea~~~g~P~l~ip~~~~~EQ~~~a~~l~~~G~~~~~~~~~~~~~~l 310 (318)
T PF13528_consen 241 ----TPDFAELMAA-ADLVISKG-----GYTTISEALALGKPALVIPRPGQDEQEYNARKLEELGLGIVLSQEDLTPERL 310 (318)
T ss_pred ----hHHHHHHHHh-CCEEEECC-----CHHHHHHHHHcCCCEEEEeCCCCchHHHHHHHHHHCCCeEEcccccCCHHHH
Confidence 2478899995 99999764 555 999999999999986655333 33344466666543 45666
Q ss_pred HHHHH
Q 003947 697 TGILV 701 (784)
Q Consensus 697 Ae~I~ 701 (784)
++.|.
T Consensus 311 ~~~l~ 315 (318)
T PF13528_consen 311 AEFLE 315 (318)
T ss_pred HHHHh
Confidence 66664
No 111
>PF08323 Glyco_transf_5: Starch synthase catalytic domain; InterPro: IPR013534 This region represents the catalytic domain of glycogen (or starch) synthases that use ADP-glucose (2.4.1.21 from EC), rather than UDP-glucose (2.4.1.11 from EC) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate.; PDB: 2BIS_C 3L01_A 3FRO_A 2R4U_A 2R4T_A 3D1J_A 3COP_A 3GUH_A 2QZS_A 3CX4_A ....
Probab=98.85 E-value=7.2e-09 Score=109.43 Aligned_cols=184 Identities=16% Similarity=0.145 Sum_probs=99.2
Q ss_pred EEEEEccCccccccCccCCCCcccchhhhHHHHHHHHHHHHHHHHHcCCCcccceEEEecCCCCCCCCCc-Ccceeeec-
Q 003947 256 NVVIFTPHGYFAQDNVLGYPDTGGQVVYILDQVRALENEMLLRIKQQGLDITPRILIITRLLPDAVGTTC-GQRVEKVY- 333 (784)
Q Consensus 256 kI~ivs~h~~~~~~~~lg~p~tGG~~vyv~d~~raLe~eLa~~L~~~GheV~~~i~VvTr~~~~~~g~~~-~~~~e~v~- 333 (784)
||+++|....|- -.+||...++- .|+++|+++||+|. |+++.++....... ...+....
T Consensus 1 kIl~vt~E~~P~-------~k~GGLgdv~~--------~L~kaL~~~G~~V~----Vi~P~y~~~~~~~~~~~~~~~~~~ 61 (245)
T PF08323_consen 1 KILMVTSEYAPF-------AKVGGLGDVVG--------SLPKALAKQGHDVR----VIMPKYGFIDEEYFQLEPVRRLSV 61 (245)
T ss_dssp EEEEE-S-BTTT-------B-SSHHHHHHH--------HHHHHHHHTT-EEE----EEEE-THHHHHHCTTEEEEEEES-
T ss_pred CEEEEEcccCcc-------cccCcHhHHHH--------HHHHHHHhcCCeEE----EEEccchhhhhhhhcceEEEEecc
Confidence 799999887631 37899999999 55556699999999 99988642211100 00000000
Q ss_pred -------------------CcCCeEEEEccCCCCcccccccccccCChh--------hHH---HHHHHHHHHHHHHcCCC
Q 003947 334 -------------------GTKYSDILRVPFRTEEGIVRKWISRFEVWP--------YLE---TFTEDVATEIIQELQCK 383 (784)
Q Consensus 334 -------------------~~~~v~IlrvP~~~~~~~~~~~isr~~l~~--------yl~---~f~~~~~~~i~~~~~~~ 383 (784)
..+++.++-+.-. .+.+|..++. -.+ .|...+. ++...+..+
T Consensus 62 ~~~~~v~~~~~~~~~v~~~~~~~v~v~~i~~~-------~~f~r~~iY~~~~~~~~d~~~rf~~fs~a~l-e~~~~l~~~ 133 (245)
T PF08323_consen 62 PFGGPVPVGVWYEVRVYRYPVDGVPVYFIDNP-------EYFDRPGIYGDNGGDYPDNAERFAFFSRAAL-ELLKKLGWK 133 (245)
T ss_dssp STTCEEEEE----EEEEEEEETTEEEEEEESH-------HHHGSSSSSBSTSSBHTTHHHHHHHHHHHHH-HHHCTCT-S
T ss_pred ccccccccccceEEEEEEEEcCCccEEEecCh-------hhccccceeccCCCcchhHHHHHHHHHHHHH-HHHHhhCCC
Confidence 0123333332211 1222333331 122 2333333 333333568
Q ss_pred ceEEEEcCCChhHHHHHHHHhC-------CCcEEEEecCCcccCC-CCCc-----chhhh--ccccccccchhhhhHHHh
Q 003947 384 PDLIIGNYSDGNIVASLLAHKL-------DVTQCTIAHALELTKY-PDSD-----INWKK--LDDKYHFSCQFTADLFAM 448 (784)
Q Consensus 384 pDIIh~~~~~~~lva~llar~~-------gvp~V~t~H~l~~~k~-~~s~-----~~~~~--~~~~y~~~~~~~~e~~a~ 448 (784)
|||||+|.|.+++++.+++... ++|+|+|+|++..... +... +.+.. ....+.+.......+.++
T Consensus 134 pDIIH~hDW~tal~p~~lk~~~~~~~~~~~~~~v~TIHN~~yqg~~~~~~~~~~gl~~~~~~~~~~~~~~~~in~lk~gi 213 (245)
T PF08323_consen 134 PDIIHCHDWHTALAPLYLKERYQQDPFFANIPTVFTIHNLEYQGIFPPEDLKALGLPDEYFQNLDEYEFYGQINFLKAGI 213 (245)
T ss_dssp -SEEEEECGGGTTHHHHHHHCCSS------SEEEEEESSTT---EEEGGGGGCTT-GGGGS-STTTTEETTEEEHHHHHH
T ss_pred CCEEEecCchHHHHHHHhccccccccccccceeEEEEcccccCCcCCHHHHHHcCCCHHHhccccccccccccCHHHHHH
Confidence 9999999999999999998876 5999999999754321 1111 11111 111122233344556789
Q ss_pred cccCEEEecChHhHhhcc
Q 003947 449 NRTDFIITSTFQEIAGSK 466 (784)
Q Consensus 449 ~~AD~IIt~S~~~~~~~~ 466 (784)
..||.|+|+|+..+..+.
T Consensus 214 ~~AD~v~TVS~~Ya~Ei~ 231 (245)
T PF08323_consen 214 VYADKVTTVSPTYAREIQ 231 (245)
T ss_dssp HHSSEEEESSHHHHHHTT
T ss_pred HhcCEeeeCCHHHHHHHh
Confidence 999999999999887443
No 112
>TIGR01426 MGT glycosyltransferase, MGT family. This model describes the MGT (macroside glycosyltransferase) subfamily of the UDP-glucuronosyltransferase family. Members include a number of glucosyl transferases for macrolide antibiotic inactivation, but also include transferases of glucose-related sugars for macrolide antibiotic production.
Probab=98.83 E-value=2.8e-06 Score=95.52 Aligned_cols=111 Identities=18% Similarity=0.200 Sum_probs=72.8
Q ss_pred CCCcEEEccCcCCcCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcCcccc----ccccccCceEEEEC
Q 003947 614 LNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCNGGP----AEIIVHGKSGFHID 689 (784)
Q Consensus 614 L~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMA~GlPVIaT~~GG~----~EiI~dg~~G~li~ 689 (784)
+.++|.+.+ +++..+ +++ .+|++|..+ |. .|+.||+++|+|+|+....+- .+.+.+...|..++
T Consensus 273 ~~~~v~~~~----~~p~~~---ll~-~~~~~I~hg---G~-~t~~Eal~~G~P~v~~p~~~dq~~~a~~l~~~g~g~~l~ 340 (392)
T TIGR01426 273 LPPNVEVRQ----WVPQLE---ILK-KADAFITHG---GM-NSTMEALFNGVPMVAVPQGADQPMTARRIAELGLGRHLP 340 (392)
T ss_pred CCCCeEEeC----CCCHHH---HHh-hCCEEEECC---Cc-hHHHHHHHhCCCEEecCCcccHHHHHHHHHHCCCEEEec
Confidence 457888887 555544 455 489999764 33 489999999999999744432 33344545777776
Q ss_pred CC--CHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHH
Q 003947 690 PY--KGDQATGILVDFFEKCKVDPGHWDEISQGGLKRIQEKYTWKIYSERLLNL 741 (784)
Q Consensus 690 p~--d~e~lAe~I~~~l~~ll~dp~~~~~m~~~a~~~v~~~ytw~~~a~~ll~l 741 (784)
.. +.++++++|. +++.|+++++++.+ ..+.+...-.-+..++.++++
T Consensus 341 ~~~~~~~~l~~ai~----~~l~~~~~~~~~~~-l~~~~~~~~~~~~aa~~i~~~ 389 (392)
T TIGR01426 341 PEEVTAEKLREAVL----AVLSDPRYAERLRK-MRAEIREAGGARRAADEIEGF 389 (392)
T ss_pred cccCCHHHHHHHHH----HHhcCHHHHHHHHH-HHHHHHHcCCHHHHHHHHHHh
Confidence 43 4677777776 45578887666643 334444555666666666654
No 113
>PF09314 DUF1972: Domain of unknown function (DUF1972); InterPro: IPR015393 This domain is functionally uncharacterised and found in bacterial glycosyltransferases and rhamnosyltransferases.
Probab=98.79 E-value=8.5e-08 Score=96.33 Aligned_cols=177 Identities=19% Similarity=0.235 Sum_probs=115.1
Q ss_pred ceEEEEEccCccccccCccCCCCcccchhhhHHHHHHHHHHHHHHHHHcCCCcccceEEEecCCCCCCCCCcCcceeeec
Q 003947 254 VFNVVIFTPHGYFAQDNVLGYPDTGGQVVYILDQVRALENEMLLRIKQQGLDITPRILIITRLLPDAVGTTCGQRVEKVY 333 (784)
Q Consensus 254 ~mkI~ivs~h~~~~~~~~lg~p~tGG~~vyv~d~~raLe~eLa~~L~~~GheV~~~i~VvTr~~~~~~g~~~~~~~e~v~ 333 (784)
|.||+||...|.|. .-||-+..+. +|+.+|+++||+|+ |.|+..... .. ..
T Consensus 1 mkkIaIiGtrGIPa--------~YGGfET~ve--------~L~~~l~~~g~~v~----Vyc~~~~~~------~~---~~ 51 (185)
T PF09314_consen 1 MKKIAIIGTRGIPA--------RYGGFETFVE--------ELAPRLVSKGIDVT----VYCRSDYYP------YK---EF 51 (185)
T ss_pred CceEEEEeCCCCCc--------ccCcHHHHHH--------HHHHHHhcCCceEE----EEEccCCCC------CC---Cc
Confidence 35899999999865 4599999999 78888899999999 998863221 11 22
Q ss_pred CcCCeEEEEccCCCCcccccccccccCChhhHHHHHHHHHHHHH-----HHcCCCceEEEEcCCC-hhHHHHHHHHh--C
Q 003947 334 GTKYSDILRVPFRTEEGIVRKWISRFEVWPYLETFTEDVATEII-----QELQCKPDLIIGNYSD-GNIVASLLAHK--L 405 (784)
Q Consensus 334 ~~~~v~IlrvP~~~~~~~~~~~isr~~l~~yl~~f~~~~~~~i~-----~~~~~~pDIIh~~~~~-~~lva~llar~--~ 405 (784)
...|++++.+|.... |. ++++.-++...+. +.-+.+.|||+.+... ++++..++.+. .
T Consensus 52 ~y~gv~l~~i~~~~~-g~-------------~~si~yd~~sl~~al~~~~~~~~~~~ii~ilg~~~g~~~~~~~r~~~~~ 117 (185)
T PF09314_consen 52 EYNGVRLVYIPAPKN-GS-------------AESIIYDFLSLLHALRFIKQDKIKYDIILILGYGIGPFFLPFLRKLRKK 117 (185)
T ss_pred ccCCeEEEEeCCCCC-Cc-------------hHHHHHHHHHHHHHHHHHhhccccCCEEEEEcCCccHHHHHHHHhhhhc
Confidence 335789999987542 21 1112222211111 1112357899987766 55555555443 4
Q ss_pred CCcEEEEecCCcccCCCCCcchhhhccccccccchhhhhHHHhcccCEEEecChHhHhhcccccccccccccccccccee
Q 003947 406 DVTQCTIAHALELTKYPDSDINWKKLDDKYHFSCQFTADLFAMNRTDFIITSTFQEIAGSKDTVGQYESHTAFSLPGLYR 485 (784)
Q Consensus 406 gvp~V~t~H~l~~~k~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~~~~~~~~~~vgqYe~~~~f~~p~l~~ 485 (784)
|.|+++..|+++... .+|..+..+|. ...|+++.+.||.+|+.|....+-.++.
T Consensus 118 g~~v~vN~DGlEWkR-----~KW~~~~k~~l----k~~E~~avk~ad~lIaDs~~I~~y~~~~----------------- 171 (185)
T PF09314_consen 118 GGKVVVNMDGLEWKR-----AKWGRPAKKYL----KFSEKLAVKYADRLIADSKGIQDYIKER----------------- 171 (185)
T ss_pred CCcEEECCCcchhhh-----hhcCHHHHHHH----HHHHHHHHHhCCEEEEcCHHHHHHHHHH-----------------
Confidence 679999999987432 25555444442 2468889999999999997765522221
Q ss_pred eecCCCCCCCceEEecCCCC
Q 003947 486 VVNGIDAFDPKFNIVSPGAD 505 (784)
Q Consensus 486 ~~~gi~~f~~k~~VIpnGvD 505 (784)
.+ ..+..+|++|+|
T Consensus 172 --y~----~~~s~~IaYGad 185 (185)
T PF09314_consen 172 --YG----RKKSTFIAYGAD 185 (185)
T ss_pred --cC----CCCcEEecCCCC
Confidence 11 368899999987
No 114
>TIGR03492 conserved hypothetical protein. This protein family is restricted to the Cyanobacteria, in one or two copies, save for instances in the genus Deinococcus. This protein shows some sequence similarity, especially toward the C-terminus, to lipid-A-disaccharide synthase (TIGR00215 or pfam02684). The function is unknown.
Probab=98.77 E-value=1.6e-06 Score=97.95 Aligned_cols=272 Identities=14% Similarity=0.107 Sum_probs=152.8
Q ss_pred CCCceEEEEcCCChhHHHHHHHHhCCCcEEE-EecCCcccCCCCCcchhhhccccccccchh-----hhhHHHhcccCEE
Q 003947 381 QCKPDLIIGNYSDGNIVASLLAHKLDVTQCT-IAHALELTKYPDSDINWKKLDDKYHFSCQF-----TADLFAMNRTDFI 454 (784)
Q Consensus 381 ~~~pDIIh~~~~~~~lva~llar~~gvp~V~-t~H~l~~~k~~~s~~~~~~~~~~y~~~~~~-----~~e~~a~~~AD~I 454 (784)
..+||+|.+- |++++.++|+..|+|+++ -.|.-.. +..+...| ...+.|+-..-. ..-++.-+.||.|
T Consensus 91 ~~~p~~v~~~---Gg~v~~~aA~~~~~p~~~~~~~esn~--~~~~~~~~-~~~~~~~~~~G~~~~p~e~n~l~~~~a~~v 164 (396)
T TIGR03492 91 AKKGDLIVAV---GDIVPLLFAWLSGKPYAFVGTAKSDY--YWESGPRR-SPSDEYHRLEGSLYLPWERWLMRSRRCLAV 164 (396)
T ss_pred hhcCCEEEEE---CcHHHHHHHHHcCCCceEEEeeccce--eecCCCCC-ccchhhhccCCCccCHHHHHHhhchhhCEE
Confidence 4489999984 445677888888999775 2243211 11111111 111111111000 0123445678988
Q ss_pred EecChHhHhhccccccccccccccccccceeeecCCCCCCCceEEecCCCCCCCCCCCcHHHHhhhcchhhhHHhhcCch
Q 003947 455 ITSTFQEIAGSKDTVGQYESHTAFSLPGLYRVVNGIDAFDPKFNIVSPGADMTIYFPYMEEKRRLKHFHSEIEELLYSPV 534 (784)
Q Consensus 455 It~S~~~~~~~~~~vgqYe~~~~f~~p~l~~~~~gi~~f~~k~~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~ 534 (784)
.+..+...+... .. ..++.++.|.+-........
T Consensus 165 ~~~~~~t~~~l~--------------------~~-----g~k~~~vGnPv~d~l~~~~~--------------------- 198 (396)
T TIGR03492 165 FVRDRLTARDLR--------------------RQ-----GVRASYLGNPMMDGLEPPER--------------------- 198 (396)
T ss_pred eCCCHHHHHHHH--------------------HC-----CCeEEEeCcCHHhcCccccc---------------------
Confidence 888866554111 01 23677777754222111100
Q ss_pred hhhhhhccccCCCCCE-EEEEecc--cCCCChHHHHHHHHHhHccCCCeEEEEEe-CCCCCCcccHHHHHHHHHHHHHHH
Q 003947 535 ENKEHLCVLKDSSKPI-LFTMARL--DRVKNLTGLVEWYGKNAKLRELVNLVVVG-GDRRKESKDLEEQAEMKKMYGLID 610 (784)
Q Consensus 535 ~~~~~~gll~~~~k~i-Il~vGRL--~~~Kgi~~LieA~~~l~~~~~~v~LvIVG-~g~~~~s~d~ee~~~~~~l~~li~ 610 (784)
.++ ++++++ ++..|.- +..+++..+++++..+.+. +++.+++.- ++.+ .+.+.+..+
T Consensus 199 -----~~l--~~~~~~lllLpGSR~ae~~~~lp~~l~al~~L~~~-~~~~~v~~~~~~~~-----------~~~~~~~l~ 259 (396)
T TIGR03492 199 -----KPL--LTGRFRIALLPGSRPPEAYRNLKLLLRALEALPDS-QPFVFLAAIVPSLS-----------LEKLQAILE 259 (396)
T ss_pred -----ccc--CCCCCEEEEECCCCHHHHHccHHHHHHHHHHHhhC-CCeEEEEEeCCCCC-----------HHHHHHHHH
Confidence 022 233444 4445543 2357888999999999765 678887765 3322 133444444
Q ss_pred hcCCC--------------CcEEEccCcCCcCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcCcccc-
Q 003947 611 TYKLN--------------GQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCNGGP- 675 (784)
Q Consensus 611 ~l~L~--------------~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMA~GlPVIaT~~GG~- 675 (784)
+.+.. +++.+..+ ..+++.+++. +|++|.-| |.+..|++++|+|+|.....+.
T Consensus 260 ~~g~~~~~~~~~~~~~~~~~~~~v~~~------~~~~~~~l~~-ADlvI~rS-----Gt~T~E~a~lg~P~Ilip~~~~q 327 (396)
T TIGR03492 260 DLGWQLEGSSEDQTSLFQKGTLEVLLG------RGAFAEILHW-ADLGIAMA-----GTATEQAVGLGKPVIQLPGKGPQ 327 (396)
T ss_pred hcCceecCCccccchhhccCceEEEec------hHhHHHHHHh-CCEEEECc-----CHHHHHHHHhCCCEEEEeCCCCH
Confidence 44432 22444431 2467888884 99999886 6666999999999999874433
Q ss_pred --cccccc-----CceEEEECCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHH
Q 003947 676 --AEIIVH-----GKSGFHIDPYKGDQATGILVDFFEKCKVDPGHWDEISQGGLKRIQEKYTWKIYSERLLN 740 (784)
Q Consensus 676 --~EiI~d-----g~~G~li~p~d~e~lAe~I~~~l~~ll~dp~~~~~m~~~a~~~v~~~ytw~~~a~~ll~ 740 (784)
..+.+. | .+..+...+++.+++.+. .+++|++.+++|.++++++..+....+.+++.+.+
T Consensus 328 ~na~~~~~~~~l~g-~~~~l~~~~~~~l~~~l~----~ll~d~~~~~~~~~~~~~~lg~~~a~~~ia~~i~~ 394 (396)
T TIGR03492 328 FTYGFAEAQSRLLG-GSVFLASKNPEQAAQVVR----QLLADPELLERCRRNGQERMGPPGASARIAESILK 394 (396)
T ss_pred HHHHHHHhhHhhcC-CEEecCCCCHHHHHHHHH----HHHcCHHHHHHHHHHHHHhcCCCCHHHHHHHHHHH
Confidence 122222 3 344555667888887776 45679999988886665555444555555555443
No 115
>TIGR03568 NeuC_NnaA UDP-N-acetyl-D-glucosamine 2-epimerase, UDP-hydrolysing. This family of enzymes catalyzes the combined epimerization and UDP-hydrolysis of UDP-N-acetylglucosamine to N-acetylmannosamine. This is in contrast to the related enzyme WecB (TIGR00236) which retains the UDP moiety. NeuC acts in concert with NeuA and NeuB to synthesize CMP-N5-acetyl-neuraminate.
Probab=98.63 E-value=5.6e-06 Score=92.59 Aligned_cols=267 Identities=16% Similarity=0.210 Sum_probs=149.4
Q ss_pred CCCceEEEEcC-CChhHHHHHHHHhCCCcEEEEecCCcccCCCCCcchhhhccccccccchhhhhHHHhcccCEEEecCh
Q 003947 381 QCKPDLIIGNY-SDGNIVASLLAHKLDVTQCTIAHALELTKYPDSDINWKKLDDKYHFSCQFTADLFAMNRTDFIITSTF 459 (784)
Q Consensus 381 ~~~pDIIh~~~-~~~~lva~llar~~gvp~V~t~H~l~~~k~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~ 459 (784)
..+||+|.++. ....+.+.++|..+++|+++ +|+-..+. + ..+...+ ...-+-||...+.+.
T Consensus 91 ~~~Pd~vlv~GD~~~~la~alaA~~~~IPv~H-veaG~rs~----~----~~eE~~r--------~~i~~la~l~f~~t~ 153 (365)
T TIGR03568 91 RLKPDLVVVLGDRFEMLAAAIAAALLNIPIAH-IHGGEVTE----G----AIDESIR--------HAITKLSHLHFVATE 153 (365)
T ss_pred HhCCCEEEEeCCchHHHHHHHHHHHhCCcEEE-EECCccCC----C----CchHHHH--------HHHHHHHhhccCCCH
Confidence 34899999987 44578889999999999874 34322111 0 0111111 112334677777776
Q ss_pred HhHhhccccccccccccccccccceeeecCCCCCCCceEEec-CCCCCCCCCCCcHHHHhhhcchhhhHHhhcCchhhhh
Q 003947 460 QEIAGSKDTVGQYESHTAFSLPGLYRVVNGIDAFDPKFNIVS-PGADMTIYFPYMEEKRRLKHFHSEIEELLYSPVENKE 538 (784)
Q Consensus 460 ~~~~~~~~~vgqYe~~~~f~~p~l~~~~~gi~~f~~k~~VIp-nGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~ 538 (784)
...+.. ...|++ +.++.++. +++|.-....... .....+
T Consensus 154 ~~~~~L--------------------~~eg~~--~~~i~~tG~~~iD~l~~~~~~~------------------~~~~~~ 193 (365)
T TIGR03568 154 EYRQRV--------------------IQMGED--PDRVFNVGSPGLDNILSLDLLS------------------KEELEE 193 (365)
T ss_pred HHHHHH--------------------HHcCCC--CCcEEEECCcHHHHHHhhhccC------------------HHHHHH
Confidence 655411 112444 55777664 4565432211111 112234
Q ss_pred hhccccCCC-CCEEEEEeccc--CCCChHHHHHHHHHhHccCCCeEEEEEe--CCCCCCcccHHHHHHHHHHHHHHHhcC
Q 003947 539 HLCVLKDSS-KPILFTMARLD--RVKNLTGLVEWYGKNAKLRELVNLVVVG--GDRRKESKDLEEQAEMKKMYGLIDTYK 613 (784)
Q Consensus 539 ~~gll~~~~-k~iIl~vGRL~--~~Kgi~~LieA~~~l~~~~~~v~LvIVG--~g~~~~s~d~ee~~~~~~l~~li~~l~ 613 (784)
++|+ +++ +.+++.+-+-. .....+.+.+.+..+.+...++ +++. +++. +....+.+.+....
T Consensus 194 ~lgl--~~~~~~vlvt~Hp~~~~~~~~~~~l~~li~~L~~~~~~~--~vi~P~~~p~-------~~~i~~~i~~~~~~-- 260 (365)
T TIGR03568 194 KLGI--DLDKPYALVTFHPVTLEKESAEEQIKELLKALDELNKNY--IFTYPNADAG-------SRIINEAIEEYVNE-- 260 (365)
T ss_pred HhCC--CCCCCEEEEEeCCCcccccCchHHHHHHHHHHHHhccCC--EEEEeCCCCC-------chHHHHHHHHHhcC--
Confidence 4665 333 34344444432 3333344444444444433334 4443 2222 11112233333211
Q ss_pred CCCcEEEccCcCCcCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCH
Q 003947 614 LNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCNGGPAEIIVHGKSGFHIDPYKG 693 (784)
Q Consensus 614 L~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMA~GlPVIaT~~GG~~EiI~dg~~G~li~p~d~ 693 (784)
.++|.+++ +++..++..+++. ++++|--| +-.+.||.++|+|||+ .|.-+|.++.|.+++++ +.|+
T Consensus 261 -~~~v~l~~----~l~~~~~l~Ll~~-a~~vitdS-----Sggi~EA~~lg~Pvv~--l~~R~e~~~~g~nvl~v-g~~~ 326 (365)
T TIGR03568 261 -HPNFRLFK----SLGQERYLSLLKN-ADAVIGNS-----SSGIIEAPSFGVPTIN--IGTRQKGRLRADSVIDV-DPDK 326 (365)
T ss_pred -CCCEEEEC----CCChHHHHHHHHh-CCEEEEcC-----hhHHHhhhhcCCCEEe--ecCCchhhhhcCeEEEe-CCCH
Confidence 46799998 7888999999996 88888543 2234899999999995 45688888888888878 4588
Q ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHH
Q 003947 694 DQATGILVDFFEKCKVDPGHWDEISQGGLKRIQEKYTWKIYSERLLNL 741 (784)
Q Consensus 694 e~lAe~I~~~l~~ll~dp~~~~~m~~~a~~~v~~~ytw~~~a~~ll~l 741 (784)
+++.+++.++ .+++.++.+ ....+.|.....++++.++
T Consensus 327 ~~I~~a~~~~-----~~~~~~~~~-----~~~~~pygdg~as~rI~~~ 364 (365)
T TIGR03568 327 EEIVKAIEKL-----LDPAFKKSL-----KNVKNPYGDGNSSERIIEI 364 (365)
T ss_pred HHHHHHHHHH-----hChHHHHHH-----hhCCCCCCCChHHHHHHHh
Confidence 9988888742 244443332 1222457666677766553
No 116
>PF13477 Glyco_trans_4_2: Glycosyl transferase 4-like
Probab=98.56 E-value=8.1e-07 Score=84.53 Aligned_cols=123 Identities=23% Similarity=0.245 Sum_probs=77.9
Q ss_pred HHHHHHHHcCCCcccceEEEecCCCCCCCCCcCcceeeecCcCCeEEEEccCCCCcccccccccccCChhhHHHHHHHHH
Q 003947 294 EMLLRIKQQGLDITPRILIITRLLPDAVGTTCGQRVEKVYGTKYSDILRVPFRTEEGIVRKWISRFEVWPYLETFTEDVA 373 (784)
Q Consensus 294 eLa~~L~~~GheV~~~i~VvTr~~~~~~g~~~~~~~e~v~~~~~v~IlrvP~~~~~~~~~~~isr~~l~~yl~~f~~~~~ 373 (784)
.+++.|+++|++|+ ++|...+. +.....+++.+++++.... ...+++. +. .+.
T Consensus 15 ~~~~~L~~~g~~V~----ii~~~~~~----------~~~~~~~~i~~~~~~~~~k-----------~~~~~~~-~~-~l~ 67 (139)
T PF13477_consen 15 NLAKELKKRGYDVH----IITPRNDY----------EKYEIIEGIKVIRLPSPRK-----------SPLNYIK-YF-RLR 67 (139)
T ss_pred HHHHHHHHCCCEEE----EEEcCCCc----------hhhhHhCCeEEEEecCCCC-----------ccHHHHH-HH-HHH
Confidence 55667799999999 88874221 1112234678888864321 1344443 22 333
Q ss_pred HHHHHHcCCCceEEEEcCCCh-hHHHHHHHHhCC-CcEEEEecCCcccCCCCCcchhhhccccccccchhhhhHHHhccc
Q 003947 374 TEIIQELQCKPDLIIGNYSDG-NIVASLLAHKLD-VTQCTIAHALELTKYPDSDINWKKLDDKYHFSCQFTADLFAMNRT 451 (784)
Q Consensus 374 ~~i~~~~~~~pDIIh~~~~~~-~lva~llar~~g-vp~V~t~H~l~~~k~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~A 451 (784)
+.+. ..+|||||+|...+ ++++.++++..+ +|++.+.|+..... .....+ .+. ...+.+++.|
T Consensus 68 k~ik---~~~~DvIh~h~~~~~~~~~~l~~~~~~~~~~i~~~hg~~~~~---~~~~~~----~~~-----~~~~~~~k~~ 132 (139)
T PF13477_consen 68 KIIK---KEKPDVIHCHTPSPYGLFAMLAKKLLKNKKVIYTVHGSDFYN---SSKKKK----LKK-----FIIKFAFKRA 132 (139)
T ss_pred HHhc---cCCCCEEEEecCChHHHHHHHHHHHcCCCCEEEEecCCeeec---CCchHH----HHH-----HHHHHHHHhC
Confidence 3333 45899999999887 788888889998 99999999864311 110100 011 1345689999
Q ss_pred CEEEecC
Q 003947 452 DFIITST 458 (784)
Q Consensus 452 D~IIt~S 458 (784)
|.|++.|
T Consensus 133 ~~ii~~~ 139 (139)
T PF13477_consen 133 DKIIVQS 139 (139)
T ss_pred CEEEEcC
Confidence 9999865
No 117
>TIGR03590 PseG pseudaminic acid biosynthesis-associated protein PseG. This protein is found in association with enzymes involved in the biosynthesis of pseudaminic acid, a component of polysaccharide in certain Pseudomonas strains as well as a modification of flagellin in Campylobacter and Hellicobacter. The role of this protein is unclear, although it may participate in N-acetylation in conjunction with, or in the absence of PseH (TIGR03585) as it often scores above the trusted cutoff to pfam00583 representing a family of acetyltransferases.
Probab=98.40 E-value=2.6e-05 Score=83.98 Aligned_cols=97 Identities=14% Similarity=0.231 Sum_probs=68.6
Q ss_pred CCEEEEEecccCCCChHHHHHHHHHhHccCCCeEEE-EEeCCCCCCcccHHHHHHHHHHHHHHHhcCCCCcEEEccCcCC
Q 003947 548 KPILFTMARLDRVKNLTGLVEWYGKNAKLRELVNLV-VVGGDRRKESKDLEEQAEMKKMYGLIDTYKLNGQFRWISSQMN 626 (784)
Q Consensus 548 k~iIl~vGRL~~~Kgi~~LieA~~~l~~~~~~v~Lv-IVG~g~~~~s~d~ee~~~~~~l~~li~~l~L~~~V~flG~~~~ 626 (784)
+.+++++|..++.+....+++++.++. .++++. |+|.+.. ..+++++.++.. +++++.++
T Consensus 171 ~~iLi~~GG~d~~~~~~~~l~~l~~~~---~~~~i~vv~G~~~~----------~~~~l~~~~~~~---~~i~~~~~--- 231 (279)
T TIGR03590 171 RRVLVSFGGADPDNLTLKLLSALAESQ---INISITLVTGSSNP----------NLDELKKFAKEY---PNIILFID--- 231 (279)
T ss_pred CeEEEEeCCcCCcCHHHHHHHHHhccc---cCceEEEEECCCCc----------CHHHHHHHHHhC---CCEEEEeC---
Confidence 467999999998776667788887643 344443 5555432 124455555543 47888873
Q ss_pred cCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcCc
Q 003947 627 RVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCN 672 (784)
Q Consensus 627 ~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMA~GlPVIaT~~ 672 (784)
..++.++|+. +|++|.+ -|.|+.|++++|+|+|+...
T Consensus 232 ---~~~m~~lm~~-aDl~Is~-----~G~T~~E~~a~g~P~i~i~~ 268 (279)
T TIGR03590 232 ---VENMAELMNE-ADLAIGA-----AGSTSWERCCLGLPSLAICL 268 (279)
T ss_pred ---HHHHHHHHHH-CCEEEEC-----CchHHHHHHHcCCCEEEEEe
Confidence 3478899995 9999985 47999999999999998654
No 118
>COG1519 KdtA 3-deoxy-D-manno-octulosonic-acid transferase [Cell envelope biogenesis, outer membrane]
Probab=98.36 E-value=0.00031 Score=78.10 Aligned_cols=266 Identities=14% Similarity=0.135 Sum_probs=160.8
Q ss_pred CCCceEEEEcCCChhHHHHHHHHhCCCcEEEEecCCcccCCCCCcchhhhccccccccchhhhhHHHhcccCEEEecChH
Q 003947 381 QCKPDLIIGNYSDGNIVASLLAHKLDVTQCTIAHALELTKYPDSDINWKKLDDKYHFSCQFTADLFAMNRTDFIITSTFQ 460 (784)
Q Consensus 381 ~~~pDIIh~~~~~~~lva~llar~~gvp~V~t~H~l~~~k~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~~ 460 (784)
..+||+++.--+.-...-..-+++.|+|++..---+ |+... ..|....++ -+..+...|.|++-|+.
T Consensus 121 ~~~P~l~Ii~EtElWPnli~e~~~~~~p~~LvNaRL-------S~rS~----~~y~k~~~~--~~~~~~~i~li~aQse~ 187 (419)
T COG1519 121 KWRPKLLIIMETELWPNLINELKRRGIPLVLVNARL-------SDRSF----ARYAKLKFL--ARLLFKNIDLILAQSEE 187 (419)
T ss_pred hcCCCEEEEEeccccHHHHHHHHHcCCCEEEEeeee-------chhhh----HHHHHHHHH--HHHHHHhcceeeecCHH
Confidence 348998886544432333445677899987533212 11111 122222222 33468899999999988
Q ss_pred hHhhccccccccccccccccccceeeecCCCCCCCceEEecCCCCCCCCC-CCcHHHHhhhcchhhhHHhhcCchhhhhh
Q 003947 461 EIAGSKDTVGQYESHTAFSLPGLYRVVNGIDAFDPKFNIVSPGADMTIYF-PYMEEKRRLKHFHSEIEELLYSPVENKEH 539 (784)
Q Consensus 461 ~~~~~~~~vgqYe~~~~f~~p~l~~~~~gi~~f~~k~~VIpnGvD~~~f~-p~~~~~~rl~~~~~~~~~~l~~~~~~~~~ 539 (784)
..+. |.+. |+. ++.+..| +..+. |.+....... ..+.+
T Consensus 188 D~~R-------f~~L-------------Ga~----~v~v~GN---lKfd~~~~~~~~~~~~--------------~~r~~ 226 (419)
T COG1519 188 DAQR-------FRSL-------------GAK----PVVVTGN---LKFDIEPPPQLAAELA--------------ALRRQ 226 (419)
T ss_pred HHHH-------HHhc-------------CCc----ceEEecc---eeecCCCChhhHHHHH--------------HHHHh
Confidence 7763 2211 221 2344333 11111 1111111111 12233
Q ss_pred hccccCCCCCEEEEEecccCCCChHHHHHHHHHhHccCCCeEEEEEeCCCCCCcccHHHHHHHHHHHHHHHhcCCC----
Q 003947 540 LCVLKDSSKPILFTMARLDRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYGLIDTYKLN---- 615 (784)
Q Consensus 540 ~gll~~~~k~iIl~vGRL~~~Kgi~~LieA~~~l~~~~~~v~LvIVG~g~~~~s~d~ee~~~~~~l~~li~~l~L~---- 615 (784)
++ ..+++++..+. ...--+.++++...+++.+|++.+++|=..++ ..+.++++++..|+.
T Consensus 227 l~----~~r~v~iaaST--H~GEeei~l~~~~~l~~~~~~~llIlVPRHpE----------Rf~~v~~l~~~~gl~~~~r 290 (419)
T COG1519 227 LG----GHRPVWVAAST--HEGEEEIILDAHQALKKQFPNLLLILVPRHPE----------RFKAVENLLKRKGLSVTRR 290 (419)
T ss_pred cC----CCCceEEEecC--CCchHHHHHHHHHHHHhhCCCceEEEecCChh----------hHHHHHHHHHHcCCeEEee
Confidence 33 22788888876 33334558899999999999999999977653 356778888888773
Q ss_pred --------CcEEEccCcCCcCChhHHHHHHHccccEE-EeCCCCCCCcHHHHHHHHcCCcEEEc----CccccccccccC
Q 003947 616 --------GQFRWISSQMNRVRNGELYRYICDTKGAF-VQPALYEAFGLTVVEAMTCGLPTFAT----CNGGPAEIIVHG 682 (784)
Q Consensus 616 --------~~V~flG~~~~~v~~~el~~~la~aadvf-V~PS~~E~fGltvlEAMA~GlPVIaT----~~GG~~EiI~dg 682 (784)
+.=.++| -..+|+..+|.- +|+. |=-|+.+-=|--++|+.++|+|||.- ++..+.+-+...
T Consensus 291 S~~~~~~~~tdV~l~-----DtmGEL~l~y~~-adiAFVGGSlv~~GGHN~LEpa~~~~pvi~Gp~~~Nf~ei~~~l~~~ 364 (419)
T COG1519 291 SQGDPPFSDTDVLLG-----DTMGELGLLYGI-ADIAFVGGSLVPIGGHNPLEPAAFGTPVIFGPYTFNFSDIAERLLQA 364 (419)
T ss_pred cCCCCCCCCCcEEEE-----ecHhHHHHHHhh-ccEEEECCcccCCCCCChhhHHHcCCCEEeCCccccHHHHHHHHHhc
Confidence 1113343 146799999984 7754 44566655577899999999999985 333344444455
Q ss_pred ceEEEECCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHh
Q 003947 683 KSGFHIDPYKGDQATGILVDFFEKCKVDPGHWDEISQGGLKRIQEK 728 (784)
Q Consensus 683 ~~G~li~p~d~e~lAe~I~~~l~~ll~dp~~~~~m~~~a~~~v~~~ 728 (784)
..|+.++ |.+.++.++. .+.+|++.+++|++++...+.++
T Consensus 365 ga~~~v~--~~~~l~~~v~----~l~~~~~~r~~~~~~~~~~v~~~ 404 (419)
T COG1519 365 GAGLQVE--DADLLAKAVE----LLLADEDKREAYGRAGLEFLAQN 404 (419)
T ss_pred CCeEEEC--CHHHHHHHHH----HhcCCHHHHHHHHHHHHHHHHHh
Confidence 5678775 4555555553 66788999999999999988544
No 119
>PF13844 Glyco_transf_41: Glycosyl transferase family 41; PDB: 3PE4_C 3PE3_D 3TAX_C 2XGO_A 2JLB_B 2XGM_A 2VSY_B 2XGS_B 2VSN_A.
Probab=98.30 E-value=1.7e-05 Score=90.20 Aligned_cols=185 Identities=12% Similarity=0.097 Sum_probs=119.8
Q ss_pred hhhhhhhccccCCCCCEEEEEecccCCCChHHHHHHHHHhHccCCCeEEEEEeCCCCCCcccHHHHHHHHHHHHHHHhcC
Q 003947 534 VENKEHLCVLKDSSKPILFTMARLDRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYGLIDTYK 613 (784)
Q Consensus 534 ~~~~~~~gll~~~~k~iIl~vGRL~~~Kgi~~LieA~~~l~~~~~~v~LvIVG~g~~~~s~d~ee~~~~~~l~~li~~l~ 613 (784)
...|+.+|+ +.+..++++..++ .|=-+..++++.++.+.-|+.+|++...... ..+.+.+.+++.|
T Consensus 273 ~~~R~~~gL--p~d~vvF~~fn~~--~KI~p~~l~~W~~IL~~vP~S~L~L~~~~~~----------~~~~l~~~~~~~G 338 (468)
T PF13844_consen 273 VTTRAQYGL--PEDAVVFGSFNNL--FKISPETLDLWARILKAVPNSRLWLLRFPAS----------GEARLRRRFAAHG 338 (468)
T ss_dssp EEETGGGT----SSSEEEEE-S-G--GG--HHHHHHHHHHHHHSTTEEEEEEETSTT----------HHHHHHHHHHHTT
T ss_pred ccCHHHcCC--CCCceEEEecCcc--ccCCHHHHHHHHHHHHhCCCcEEEEeeCCHH----------HHHHHHHHHHHcC
Confidence 356788998 6666666666655 5777889999999888889999999875422 1256788888999
Q ss_pred CC-CcEEEccCcCCcCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcCcccccccc-----c-cCceEE
Q 003947 614 LN-GQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCNGGPAEII-----V-HGKSGF 686 (784)
Q Consensus 614 L~-~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMA~GlPVIaT~~GG~~EiI-----~-dg~~G~ 686 (784)
+. +++.|.+ ..+.++-.+.+.. +|+++=|-.+-| |.|.+||+.+|+|||+-....+..-+ . -|-.-+
T Consensus 339 v~~~Ri~f~~----~~~~~ehl~~~~~-~DI~LDT~p~nG-~TTt~dALwmGVPvVTl~G~~~~sR~~aSiL~~lGl~El 412 (468)
T PF13844_consen 339 VDPDRIIFSP----VAPREEHLRRYQL-ADICLDTFPYNG-GTTTLDALWMGVPVVTLPGETMASRVGASILRALGLPEL 412 (468)
T ss_dssp S-GGGEEEEE-------HHHHHHHGGG--SEEE--SSS---SHHHHHHHHHT--EEB---SSGGGSHHHHHHHHHT-GGG
T ss_pred CChhhEEEcC----CCCHHHHHHHhhh-CCEEeeCCCCCC-cHHHHHHHHcCCCEEeccCCCchhHHHHHHHHHcCCchh
Confidence 86 7899987 5566677777774 999998754444 78999999999999985433322211 1 122223
Q ss_pred EECCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHh--CCHHHHHHHHHHHHHH
Q 003947 687 HIDPYKGDQATGILVDFFEKCKVDPGHWDEISQGGLKRIQEK--YTWKIYSERLLNLSGV 744 (784)
Q Consensus 687 li~p~d~e~lAe~I~~~l~~ll~dp~~~~~m~~~a~~~v~~~--ytw~~~a~~ll~ly~~ 744 (784)
+. .|.++..+.-. +|..|++.+++++++-++...+. |+-+.+++.+++.|+.
T Consensus 413 IA--~s~~eYv~~Av----~La~D~~~l~~lR~~Lr~~~~~SpLfd~~~~ar~lE~a~~~ 466 (468)
T PF13844_consen 413 IA--DSEEEYVEIAV----RLATDPERLRALRAKLRDRRSKSPLFDPKRFARNLEAAYRQ 466 (468)
T ss_dssp B---SSHHHHHHHHH----HHHH-HHHHHHHHHHHHHHHHHSGGG-HHHHHHHHHHHHHH
T ss_pred cC--CCHHHHHHHHH----HHhCCHHHHHHHHHHHHHHHhhCCCCCHHHHHHHHHHHHHH
Confidence 33 36777766665 45679999999999998877544 9999999999999875
No 120
>TIGR00661 MJ1255 conserved hypothetical protein. This model represents nearly the full length of MJ1255 from Methanococcus jannaschii and of an unpublished protein from Vibrio cholerae, as well as the C-terminal half of a protein from Methanobacterium thermoautotrophicum. A small region (~50 amino acids) within the domain appears related to a family of sugar transferases.
Probab=98.28 E-value=7.1e-05 Score=82.13 Aligned_cols=69 Identities=14% Similarity=0.119 Sum_probs=50.8
Q ss_pred CCcEEEccCcCCcCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcCcccccc------ccccCceEEEE
Q 003947 615 NGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCNGGPAE------IIVHGKSGFHI 688 (784)
Q Consensus 615 ~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMA~GlPVIaT~~GG~~E------iI~dg~~G~li 688 (784)
.+++.+.++ .+ .++..+++. +|++|.-+- + .++.||+++|+|++.....+..| .+++...|..+
T Consensus 228 ~~~v~~~~~----~~-~~~~~~l~~-ad~vI~~~G---~-~t~~Ea~~~g~P~l~ip~~~~~eQ~~na~~l~~~g~~~~l 297 (321)
T TIGR00661 228 NENVEIRRI----TT-DNFKELIKN-AELVITHGG---F-SLISEALSLGKPLIVIPDLGQFEQGNNAVKLEDLGCGIAL 297 (321)
T ss_pred CCCEEEEEC----Ch-HHHHHHHHh-CCEEEECCC---h-HHHHHHHHcCCCEEEEcCCCcccHHHHHHHHHHCCCEEEc
Confidence 568888873 32 478888885 999998752 2 47899999999999987765433 34555578888
Q ss_pred CCCCH
Q 003947 689 DPYKG 693 (784)
Q Consensus 689 ~p~d~ 693 (784)
+..+.
T Consensus 298 ~~~~~ 302 (321)
T TIGR00661 298 EYKEL 302 (321)
T ss_pred ChhhH
Confidence 77666
No 121
>PHA03392 egt ecdysteroid UDP-glucosyltransferase; Provisional
Probab=98.26 E-value=0.00062 Score=79.52 Aligned_cols=139 Identities=13% Similarity=0.028 Sum_probs=87.5
Q ss_pred CCEEEEEecccCC-----CChHHHHHHHHHhHccCCCeEEEEEeCCCCCCcccHHHHHHHHHHHHHHHhcCCCCcEEEcc
Q 003947 548 KPILFTMARLDRV-----KNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYGLIDTYKLNGQFRWIS 622 (784)
Q Consensus 548 k~iIl~vGRL~~~-----Kgi~~LieA~~~l~~~~~~v~LvIVG~g~~~~s~d~ee~~~~~~l~~li~~l~L~~~V~flG 622 (784)
.+++++.|..... +-+..+++|++++. .++++..++... . .+++++|...+
T Consensus 297 g~V~vS~GS~~~~~~~~~~~~~~~l~a~~~l~-----~~viw~~~~~~~------------------~-~~~p~Nv~i~~ 352 (507)
T PHA03392 297 GVVYVSFGSSIDTNDMDNEFLQMLLRTFKKLP-----YNVLWKYDGEVE------------------A-INLPANVLTQK 352 (507)
T ss_pred cEEEEECCCCCcCCCCCHHHHHHHHHHHHhCC-----CeEEEEECCCcC------------------c-ccCCCceEEec
Confidence 4788899987532 23455556665542 466666554210 0 24578898887
Q ss_pred CcCCcCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcCccc----cccccccCceEEEECCCC--HHHH
Q 003947 623 SQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCNGG----PAEIIVHGKSGFHIDPYK--GDQA 696 (784)
Q Consensus 623 ~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMA~GlPVIaT~~GG----~~EiI~dg~~G~li~p~d--~e~l 696 (784)
++|..++... . .+++||.= -| ..++.||+.+|+|+|+....+ .+..++.-..|..++..+ .+++
T Consensus 353 ----w~Pq~~lL~h-p-~v~~fItH---GG-~~s~~Eal~~GvP~v~iP~~~DQ~~Na~rv~~~G~G~~l~~~~~t~~~l 422 (507)
T PHA03392 353 ----WFPQRAVLKH-K-NVKAFVTQ---GG-VQSTDEAIDALVPMVGLPMMGDQFYNTNKYVELGIGRALDTVTVSAAQL 422 (507)
T ss_pred ----CCCHHHHhcC-C-CCCEEEec---CC-cccHHHHHHcCCCEEECCCCccHHHHHHHHHHcCcEEEeccCCcCHHHH
Confidence 6776665431 1 37788864 33 458999999999999974433 344444555788887654 4566
Q ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHHHH
Q 003947 697 TGILVDFFEKCKVDPGHWDEISQGGLKR 724 (784)
Q Consensus 697 Ae~I~~~l~~ll~dp~~~~~m~~~a~~~ 724 (784)
.++|. ++++||.+++...+-+...
T Consensus 423 ~~ai~----~vl~~~~y~~~a~~ls~~~ 446 (507)
T PHA03392 423 VLAIV----DVIENPKYRKNLKELRHLI 446 (507)
T ss_pred HHHHH----HHhCCHHHHHHHHHHHHHH
Confidence 66665 5668998877665544443
No 122
>PF02350 Epimerase_2: UDP-N-acetylglucosamine 2-epimerase; InterPro: IPR003331 UDP-N-acetylglucosamine 2-epimerase 5.1.3.14 from EC catalyses the production of UDP-ManNAc from UDP-GlcNAc. Some of the enzymes is this family are bifunctional. In microorganisms the epimerase is involved in in the synthesis of the capsule precursor UDP-ManNAcA [, ]. The protein from rat liver displays both epimerase and kinase activity [].; GO: 0008761 UDP-N-acetylglucosamine 2-epimerase activity, 0006047 UDP-N-acetylglucosamine metabolic process, 0009103 lipopolysaccharide biosynthetic process; PDB: 1V4V_B 3BEO_B 3DZC_B 3OT5_B 1O6C_B 1VGV_D 1F6D_C.
Probab=98.21 E-value=8.1e-05 Score=82.71 Aligned_cols=270 Identities=15% Similarity=0.159 Sum_probs=140.6
Q ss_pred CceEEEEcCCCh-hHHHHHHHHhCCCcEEEEecCCcccCCCCCcchhhhccccccccchhhhhHHHhcccCEEEecChHh
Q 003947 383 KPDLIIGNYSDG-NIVASLLAHKLDVTQCTIAHALELTKYPDSDINWKKLDDKYHFSCQFTADLFAMNRTDFIITSTFQE 461 (784)
Q Consensus 383 ~pDIIh~~~~~~-~lva~llar~~gvp~V~t~H~l~~~k~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~~~ 461 (784)
+||+|..+.-.. .+.+.++|..+++|++..--++-.... .-...+...+ ...-+-||.-++.|+..
T Consensus 67 ~Pd~Vlv~GD~~~~la~alaA~~~~ipv~HieaGlRs~d~-----~~g~~de~~R--------~~i~~la~lhf~~t~~~ 133 (346)
T PF02350_consen 67 KPDAVLVLGDRNEALAAALAAFYLNIPVAHIEAGLRSGDR-----TEGMPDEINR--------HAIDKLAHLHFAPTEEA 133 (346)
T ss_dssp T-SEEEEETTSHHHHHHHHHHHHTT-EEEEES-----S-T-----TSSTTHHHHH--------HHHHHH-SEEEESSHHH
T ss_pred CCCEEEEEcCCchHHHHHHHHHHhCCCEEEecCCCCcccc-----CCCCchhhhh--------hhhhhhhhhhccCCHHH
Confidence 899999876554 778899999999996544434322111 1001112111 12344588888999877
Q ss_pred HhhccccccccccccccccccceeeecCCCCCCCceEEecC-CCCCCCCCCCcHHHHhhhcchhhhHHhhcCchhhhhhh
Q 003947 462 IAGSKDTVGQYESHTAFSLPGLYRVVNGIDAFDPKFNIVSP-GADMTIYFPYMEEKRRLKHFHSEIEELLYSPVENKEHL 540 (784)
Q Consensus 462 ~~~~~~~vgqYe~~~~f~~p~l~~~~~gi~~f~~k~~VIpn-GvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~~ 540 (784)
++.+. ..|++ +.++.++.| ++|.-. ....+.. . .. ...
T Consensus 134 ~~~L~--------------------~~G~~--~~rI~~vG~~~~D~l~-----~~~~~~~---~--------~~---~~~ 172 (346)
T PF02350_consen 134 RERLL--------------------QEGEP--PERIFVVGNPGIDALL-----QNKEEIE---E--------KY---KNS 172 (346)
T ss_dssp HHHHH--------------------HTT----GGGEEE---HHHHHHH-----HHHHTTC---C---------H---HHH
T ss_pred HHHHH--------------------hcCCC--CCeEEEEChHHHHHHH-----HhHHHHh---h--------hh---hhH
Confidence 66322 23555 778888855 233210 0000000 0 00 001
Q ss_pred cccc-CCCCCEEEEEecccC---CCChHHHHHHHHHhHccCCCeEEEEEeCCCCCCcccHHHHHHHHHHHHHHHhcCCCC
Q 003947 541 CVLK-DSSKPILFTMARLDR---VKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYGLIDTYKLNG 616 (784)
Q Consensus 541 gll~-~~~k~iIl~vGRL~~---~Kgi~~LieA~~~l~~~~~~v~LvIVG~g~~~~s~d~ee~~~~~~l~~li~~l~L~~ 616 (784)
++.. .+++.++++.=|... ......+.+++..+.+. +++.+++.....+ ...+.+.+.++++ +
T Consensus 173 ~i~~~~~~~~iLvt~H~~t~~~~~~~~~~i~~~l~~L~~~-~~~~vi~~~hn~p---------~~~~~i~~~l~~~---~ 239 (346)
T PF02350_consen 173 GILQDAPKPYILVTLHPVTNEDNPERLEQILEALKALAER-QNVPVIFPLHNNP---------RGSDIIIEKLKKY---D 239 (346)
T ss_dssp HHHHCTTSEEEEEE-S-CCCCTHH--HHHHHHHHHHHHHH-TTEEEEEE--S-H---------HHHHHHHHHHTT----T
T ss_pred HHHhccCCCEEEEEeCcchhcCChHHHHHHHHHHHHHHhc-CCCcEEEEecCCc---------hHHHHHHHHhccc---C
Confidence 2211 233444445434332 34467788888888776 7899999887533 2234445555554 3
Q ss_pred cEEEccCcCCcCChhHHHHHHHccccEEEeCCCCCCCcHHHH-HHHHcCCcEEEc-CccccccccccCceEEEECCCCHH
Q 003947 617 QFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVV-EAMTCGLPTFAT-CNGGPAEIIVHGKSGFHIDPYKGD 694 (784)
Q Consensus 617 ~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvl-EAMA~GlPVIaT-~~GG~~EiI~dg~~G~li~p~d~e 694 (784)
+++++. .++..++..+++. ++++|-=| | .+. ||.++|+|||.- +.|--.+.+..+.+-+ ++ .|.+
T Consensus 240 ~v~~~~----~l~~~~~l~ll~~-a~~vvgdS-----s-GI~eEa~~lg~P~v~iR~~geRqe~r~~~~nvl-v~-~~~~ 306 (346)
T PF02350_consen 240 NVRLIE----PLGYEEYLSLLKN-ADLVVGDS-----S-GIQEEAPSLGKPVVNIRDSGERQEGRERGSNVL-VG-TDPE 306 (346)
T ss_dssp TEEEE--------HHHHHHHHHH-ESEEEESS-----H-HHHHHGGGGT--EEECSSS-S-HHHHHTTSEEE-ET-SSHH
T ss_pred CEEEEC----CCCHHHHHHHHhc-ceEEEEcC-----c-cHHHHHHHhCCeEEEecCCCCCHHHHhhcceEE-eC-CCHH
Confidence 899997 7788999999996 88887544 6 777 999999999998 5566677777775555 76 6899
Q ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHH
Q 003947 695 QATGILVDFFEKCKVDPGHWDEISQGGLKRIQEKYTWKIYSERLLNL 741 (784)
Q Consensus 695 ~lAe~I~~~l~~ll~dp~~~~~m~~~a~~~v~~~ytw~~~a~~ll~l 741 (784)
++.++|.+++ .+++.+.++.. ..+-|.=...++++.++
T Consensus 307 ~I~~ai~~~l----~~~~~~~~~~~-----~~npYgdG~as~rI~~~ 344 (346)
T PF02350_consen 307 AIIQAIEKAL----SDKDFYRKLKN-----RPNPYGDGNASERIVEI 344 (346)
T ss_dssp HHHHHHHHHH----H-HHHHHHHHC-----S--TT-SS-HHHHHHHH
T ss_pred HHHHHHHHHH----hChHHHHhhcc-----CCCCCCCCcHHHHHHHh
Confidence 9888887655 45454444321 12345555555555554
No 123
>KOG3742 consensus Glycogen synthase [Carbohydrate transport and metabolism]
Probab=98.21 E-value=9.9e-06 Score=88.78 Aligned_cols=105 Identities=23% Similarity=0.305 Sum_probs=70.4
Q ss_pred HHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcCcccc----ccccccC-ceEEEE-C--CCCHHHHHHHHHHHHHH
Q 003947 635 RYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCNGGP----AEIIVHG-KSGFHI-D--PYKGDQATGILVDFFEK 706 (784)
Q Consensus 635 ~~la~aadvfV~PS~~E~fGltvlEAMA~GlPVIaT~~GG~----~EiI~dg-~~G~li-~--p~d~e~lAe~I~~~l~~ 706 (784)
++.. .|.+.|+||+||++|.|..|.-.||+|-|.|+..|+ .|.|++. .-|+.| | -..+++-.+.+.+++..
T Consensus 496 eFVR-GCHLGVFPSYYEPWGYTPAECTVMGiPSvtTNlSGFGcfMeehi~d~~ayGIYIvDRRfks~deSv~qL~~~m~~ 574 (692)
T KOG3742|consen 496 EFVR-GCHLGVFPSYYEPWGYTPAECTVMGIPSVTTNLSGFGCFMEEHIEDPQAYGIYIVDRRFKSPDESVQQLASFMYE 574 (692)
T ss_pred HHhc-cccccccccccCCCCCCchheEEeccccccccccchhhhHHHHhcCchhceEEEEecccCChhhHHHHHHHHHHH
Confidence 3444 599999999999999999999999999999998886 4555543 236654 3 12445555555555533
Q ss_pred hcCCHHHHHHHHHHH-HHHHHHhCCHHHHHHHHHHH
Q 003947 707 CKVDPGHWDEISQGG-LKRIQEKYTWKIYSERLLNL 741 (784)
Q Consensus 707 ll~dp~~~~~m~~~a-~~~v~~~ytw~~~a~~ll~l 741 (784)
.. ....|+++-++. -++...-.+|+.+...|.+.
T Consensus 575 F~-~qsRRQRIiqRNrtErLSdLLDWk~lG~~Y~~a 609 (692)
T KOG3742|consen 575 FC-KQSRRQRIIQRNRTERLSDLLDWKYLGRYYRKA 609 (692)
T ss_pred HH-HHHHHHHHHHhcchhhHHHHHhHHHHhHHHHHH
Confidence 22 344455554443 35565668888877666543
No 124
>PF04007 DUF354: Protein of unknown function (DUF354); InterPro: IPR007152 Members of this family are around 350 amino acids in length. They are found in archaea and some bacteria and have no known function.
Probab=98.00 E-value=0.001 Score=73.44 Aligned_cols=61 Identities=13% Similarity=0.176 Sum_probs=43.5
Q ss_pred HHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcCcc---ccccccccCceEEEECCCCHHHHHHHHHH
Q 003947 634 YRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCNG---GPAEIIVHGKSGFHIDPYKGDQATGILVD 702 (784)
Q Consensus 634 ~~~la~aadvfV~PS~~E~fGltvlEAMA~GlPVIaT~~G---G~~EiI~dg~~G~li~p~d~e~lAe~I~~ 702 (784)
..+++- ||++|-- -|....||...|+|+|.+-.| +..+.+.+ .|.++.-.|++++.+.+.+
T Consensus 243 ~~Ll~~-a~l~Ig~-----ggTMa~EAA~LGtPaIs~~~g~~~~vd~~L~~--~Gll~~~~~~~ei~~~v~~ 306 (335)
T PF04007_consen 243 LDLLYY-ADLVIGG-----GGTMAREAALLGTPAISCFPGKLLAVDKYLIE--KGLLYHSTDPDEIVEYVRK 306 (335)
T ss_pred HHHHHh-cCEEEeC-----CcHHHHHHHHhCCCEEEecCCcchhHHHHHHH--CCCeEecCCHHHHHHHHHH
Confidence 356663 8899953 477789999999999987443 33344433 4788888899998886654
No 125
>COG1819 Glycosyl transferases, related to UDP-glucuronosyltransferase [Carbohydrate transport and metabolism / Signal transduction mechanisms]
Probab=98.00 E-value=0.00036 Score=79.19 Aligned_cols=159 Identities=14% Similarity=0.112 Sum_probs=103.6
Q ss_pred CCCCEEEEEecccCCCChHHHHHHHHHhHccCCCeEEEEEeCCCCCCcccHHHHHHHHHHHHHHHhcCCCCcEEEccCcC
Q 003947 546 SSKPILFTMARLDRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYGLIDTYKLNGQFRWISSQM 625 (784)
Q Consensus 546 ~~k~iIl~vGRL~~~Kgi~~LieA~~~l~~~~~~v~LvIVG~g~~~~s~d~ee~~~~~~l~~li~~l~L~~~V~flG~~~ 625 (784)
+.+++.++.|..... .+.+-.++..+.+ -++++++..++.+. ..-++++++...+
T Consensus 236 d~~~vyvslGt~~~~--~~l~~~~~~a~~~--l~~~vi~~~~~~~~------------------~~~~~p~n~~v~~--- 290 (406)
T COG1819 236 DRPIVYVSLGTVGNA--VELLAIVLEALAD--LDVRVIVSLGGARD------------------TLVNVPDNVIVAD--- 290 (406)
T ss_pred CCCeEEEEcCCcccH--HHHHHHHHHHHhc--CCcEEEEecccccc------------------ccccCCCceEEec---
Confidence 345567777776644 3333334444444 35677777765220 1235678888887
Q ss_pred CcCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcCcc----ccccccccCceEEEEC--CCCHHHHHHH
Q 003947 626 NRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCNG----GPAEIIVHGKSGFHID--PYKGDQATGI 699 (784)
Q Consensus 626 ~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMA~GlPVIaT~~G----G~~EiI~dg~~G~li~--p~d~e~lAe~ 699 (784)
.++..++.. .+|++|+. -|+| ++.||+..|+|+|+-..+ ..++-+++-..|..++ ..+.+.++++
T Consensus 291 -~~p~~~~l~----~ad~vI~h---GG~g-tt~eaL~~gvP~vv~P~~~DQ~~nA~rve~~G~G~~l~~~~l~~~~l~~a 361 (406)
T COG1819 291 -YVPQLELLP----RADAVIHH---GGAG-TTSEALYAGVPLVVIPDGADQPLNAERVEELGAGIALPFEELTEERLRAA 361 (406)
T ss_pred -CCCHHHHhh----hcCEEEec---CCcc-hHHHHHHcCCCEEEecCCcchhHHHHHHHHcCCceecCcccCCHHHHHHH
Confidence 666666555 69999987 3544 889999999999996444 2455666667888877 5778888888
Q ss_pred HHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Q 003947 700 LVDFFEKCKVDPGHWDEISQGGLKRIQEKYTWKIYSERLLNLSG 743 (784)
Q Consensus 700 I~~~l~~ll~dp~~~~~m~~~a~~~v~~~ytw~~~a~~ll~ly~ 743 (784)
|.+ +++|+.+++...+ ..+-..+.-..+..++.++++.+
T Consensus 362 v~~----vL~~~~~~~~~~~-~~~~~~~~~g~~~~a~~le~~~~ 400 (406)
T COG1819 362 VNE----VLADDSYRRAAER-LAEEFKEEDGPAKAADLLEEFAR 400 (406)
T ss_pred HHH----HhcCHHHHHHHHH-HHHHhhhcccHHHHHHHHHHHHh
Confidence 874 5578877665544 34444455666667776666544
No 126
>PF02684 LpxB: Lipid-A-disaccharide synthetase; InterPro: IPR003835 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. These enzymes belong to the glycosyltransferase family 19 GT19 from CAZY. Lipid-A-disaccharide synthetase 2.4.1.182 from EC is involved with acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase 2.3.1.129 from EC and tetraacyldisaccharide 4'-kinase 2.7.1.130 from EC in the biosynthesis of the phosphorylated glycolipid, lipid A, in the outer membrane of Escherichia coli and other bacteria. These enzymes catalyse the first disaccharide step in the synthesis of lipid-A-disaccharide.; GO: 0008915 lipid-A-disaccharide synthase activity, 0009245 lipid A biosynthetic process
Probab=97.97 E-value=0.0014 Score=73.30 Aligned_cols=199 Identities=20% Similarity=0.192 Sum_probs=117.4
Q ss_pred CCCceEEEE-cCCChhHHHHHHHHhCCCc--EEEEecCCcccCCCCCcchhhhccccccccchhhhhHHHhcccCEEEec
Q 003947 381 QCKPDLIIG-NYSDGNIVASLLAHKLDVT--QCTIAHALELTKYPDSDINWKKLDDKYHFSCQFTADLFAMNRTDFIITS 457 (784)
Q Consensus 381 ~~~pDIIh~-~~~~~~lva~llar~~gvp--~V~t~H~l~~~k~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~ 457 (784)
..+||+++. -+++.|+-.....++.|++ +++.+- + .-+-|+.-. -+..-+.+|.++|.
T Consensus 80 ~~~pd~vIlID~pgFNlrlak~lk~~~~~~~viyYI~---P-----qvWAWr~~R-----------~~~i~~~~D~ll~i 140 (373)
T PF02684_consen 80 EEKPDVVILIDYPGFNLRLAKKLKKRGIPIKVIYYIS---P-----QVWAWRPGR-----------AKKIKKYVDHLLVI 140 (373)
T ss_pred HcCCCEEEEeCCCCccHHHHHHHHHhCCCceEEEEEC---C-----ceeeeCccH-----------HHHHHHHHhheeEC
Confidence 569999996 4555587666666777776 654432 1 111232211 11234567999888
Q ss_pred ChHhHhhccccccccccccccccccceeeecCCCCCCCceEEecCC-CCCCCCCCCcHHHHhhhcchhhhHHhhcCchhh
Q 003947 458 TFQEIAGSKDTVGQYESHTAFSLPGLYRVVNGIDAFDPKFNIVSPG-ADMTIYFPYMEEKRRLKHFHSEIEELLYSPVEN 536 (784)
Q Consensus 458 S~~~~~~~~~~vgqYe~~~~f~~p~l~~~~~gi~~f~~k~~VIpnG-vD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~ 536 (784)
=+-|.+ -|+ .+| -++..|.|. +|.-...+... ..
T Consensus 141 fPFE~~-------~y~-------------~~g-----~~~~~VGHPl~d~~~~~~~~~--------------------~~ 175 (373)
T PF02684_consen 141 FPFEPE-------FYK-------------KHG-----VPVTYVGHPLLDEVKPEPDRA--------------------EA 175 (373)
T ss_pred CcccHH-------HHh-------------ccC-----CCeEEECCcchhhhccCCCHH--------------------HH
Confidence 877765 121 122 245566443 33321111111 11
Q ss_pred hhhhccccCCCCCE-EEEEe-cccC-CCChHHHHHHHHHhHccCCCeEEEEEeCCCCCCcccHHHHHHHHHHHHHHHhcC
Q 003947 537 KEHLCVLKDSSKPI-LFTMA-RLDR-VKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYGLIDTYK 613 (784)
Q Consensus 537 ~~~~gll~~~~k~i-Il~vG-RL~~-~Kgi~~LieA~~~l~~~~~~v~LvIVG~g~~~~s~d~ee~~~~~~l~~li~~l~ 613 (784)
++++ + ++++++ .+..| |-.+ .+.+..+++++..+.+.+|+.++++...... ..+.+.+.....+
T Consensus 176 ~~~~-l--~~~~~iIaLLPGSR~~EI~rllP~~l~aa~~l~~~~p~l~fvvp~a~~~----------~~~~i~~~~~~~~ 242 (373)
T PF02684_consen 176 REKL-L--DPDKPIIALLPGSRKSEIKRLLPIFLEAAKLLKKQRPDLQFVVPVAPEV----------HEELIEEILAEYP 242 (373)
T ss_pred HHhc-C--CCCCcEEEEeCCCCHHHHHHHHHHHHHHHHHHHHhCCCeEEEEecCCHH----------HHHHHHHHHHhhC
Confidence 1223 3 455664 45556 3333 4556889999999999999999998875421 1122444555555
Q ss_pred CCCcEEEccCcCCcCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEc
Q 003947 614 LNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFAT 670 (784)
Q Consensus 614 L~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMA~GlPVIaT 670 (784)
..-.+.... ++-+..++. +|+.+..| |.+.+|++.+|+|.|+.
T Consensus 243 ~~~~~~~~~--------~~~~~~m~~-ad~al~~S-----GTaTLE~Al~g~P~Vv~ 285 (373)
T PF02684_consen 243 PDVSIVIIE--------GESYDAMAA-ADAALAAS-----GTATLEAALLGVPMVVA 285 (373)
T ss_pred CCCeEEEcC--------CchHHHHHh-CcchhhcC-----CHHHHHHHHhCCCEEEE
Confidence 443444332 356778884 88888776 99999999999999885
No 127
>PLN02448 UDP-glycosyltransferase family protein
Probab=97.84 E-value=0.013 Score=67.65 Aligned_cols=143 Identities=10% Similarity=0.075 Sum_probs=76.1
Q ss_pred CCCEEEEEecccCCCChHHHHHHHHHhHccCCCeEEEEEeCCCCCCcccHHHHHHHHHHHHHHHhcCCCCcEEEccCcCC
Q 003947 547 SKPILFTMARLDRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYGLIDTYKLNGQFRWISSQMN 626 (784)
Q Consensus 547 ~k~iIl~vGRL~~~Kgi~~LieA~~~l~~~~~~v~LvIVG~g~~~~s~d~ee~~~~~~l~~li~~l~L~~~V~flG~~~~ 626 (784)
...++++.|.... -..+.+-+.+..+.. .+..++++..+.. ..+.+.. .+++...+
T Consensus 274 ~~vvyvsfGs~~~-~~~~~~~~~~~~l~~--~~~~~lw~~~~~~------------~~~~~~~-----~~~~~v~~---- 329 (459)
T PLN02448 274 GSVLYVSLGSFLS-VSSAQMDEIAAGLRD--SGVRFLWVARGEA------------SRLKEIC-----GDMGLVVP---- 329 (459)
T ss_pred CceEEEeeccccc-CCHHHHHHHHHHHHh--CCCCEEEEEcCch------------hhHhHhc-----cCCEEEec----
Confidence 4467788887643 223333344444433 2457776654321 0111111 24565555
Q ss_pred cCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcCccc----cccccccC-ceEEEECC-------CCHH
Q 003947 627 RVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCNGG----PAEIIVHG-KSGFHIDP-------YKGD 694 (784)
Q Consensus 627 ~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMA~GlPVIaT~~GG----~~EiI~dg-~~G~li~p-------~d~e 694 (784)
+++..++... . +.++||.- -| -++++||+++|+|+|+-...+ ....+.+. ..|+-+.. -+.+
T Consensus 330 w~pQ~~iL~h-~-~v~~fvtH---gG-~nS~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~G~~~~~~~~~~~~~~~~ 403 (459)
T PLN02448 330 WCDQLKVLCH-S-SVGGFWTH---CG-WNSTLEAVFAGVPMLTFPLFWDQPLNSKLIVEDWKIGWRVKREVGEETLVGRE 403 (459)
T ss_pred cCCHHHHhcc-C-ccceEEec---Cc-hhHHHHHHHcCCCEEeccccccchhhHHHHHHHhCceEEEecccccCCcCcHH
Confidence 6666666652 1 13346643 23 348999999999999974443 34444442 35666531 2556
Q ss_pred HHHHHHHHHHHHhcCCH-HHHHHHHHHHHH
Q 003947 695 QATGILVDFFEKCKVDP-GHWDEISQGGLK 723 (784)
Q Consensus 695 ~lAe~I~~~l~~ll~dp-~~~~~m~~~a~~ 723 (784)
++++++.++ +.++ +..++|.+++.+
T Consensus 404 ~l~~av~~v----l~~~~~~~~~~r~~a~~ 429 (459)
T PLN02448 404 EIAELVKRF----MDLESEEGKEMRRRAKE 429 (459)
T ss_pred HHHHHHHHH----hcCCchhHHHHHHHHHH
Confidence 777777644 4554 334445544443
No 128
>COG0763 LpxB Lipid A disaccharide synthetase [Cell envelope biogenesis, outer membrane]
Probab=97.74 E-value=0.0019 Score=71.22 Aligned_cols=199 Identities=18% Similarity=0.146 Sum_probs=115.3
Q ss_pred CCCceEEEEcCC-ChhHHHHHHHHhCC--CcEEEEecCCcccCCCCCcchhhhccccccccchhhhhHHHhcccCEEEec
Q 003947 381 QCKPDLIIGNYS-DGNIVASLLAHKLD--VTQCTIAHALELTKYPDSDINWKKLDDKYHFSCQFTADLFAMNRTDFIITS 457 (784)
Q Consensus 381 ~~~pDIIh~~~~-~~~lva~llar~~g--vp~V~t~H~l~~~k~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~ 457 (784)
..+||++++-++ +.|+-....-|+.+ +|+|+.+- + |-+-|+.-. -....+.+|++.+.
T Consensus 83 ~~kpD~~i~IDsPdFnl~vak~lrk~~p~i~iihYV~---P-----sVWAWr~~R-----------a~~i~~~~D~lLai 143 (381)
T COG0763 83 ANKPDVLILIDSPDFNLRVAKKLRKAGPKIKIIHYVS---P-----SVWAWRPKR-----------AVKIAKYVDHLLAI 143 (381)
T ss_pred hcCCCEEEEeCCCCCchHHHHHHHHhCCCCCeEEEEC---c-----ceeeechhh-----------HHHHHHHhhHeeee
Confidence 569999997554 44664333444445 77765443 1 222343221 11346789999998
Q ss_pred ChHhHhhccccccccccccccccccceeeecCCCCCCCceEEecC-CCCCCCCCCCcHHHHhhhcchhhhHHhhcCchhh
Q 003947 458 TFQEIAGSKDTVGQYESHTAFSLPGLYRVVNGIDAFDPKFNIVSP-GADMTIYFPYMEEKRRLKHFHSEIEELLYSPVEN 536 (784)
Q Consensus 458 S~~~~~~~~~~vgqYe~~~~f~~p~l~~~~~gi~~f~~k~~VIpn-GvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~ 536 (784)
=+-|.+ +|. ..|+ ..+.|.+ =+|.-.+.+... ..
T Consensus 144 lPFE~~-------------------~y~-k~g~-----~~~yVGHpl~d~i~~~~~r~--------------------~a 178 (381)
T COG0763 144 LPFEPA-------------------FYD-KFGL-----PCTYVGHPLADEIPLLPDRE--------------------AA 178 (381)
T ss_pred cCCCHH-------------------HHH-hcCC-----CeEEeCChhhhhccccccHH--------------------HH
Confidence 887765 121 1122 2445543 333322333322 23
Q ss_pred hhhhccccCCCC-CEEEEEec-ccC-CCChHHHHHHHHHhHccCCCeEEEEEeCCCCCCcccHHHHHHHHHHHHHHH-hc
Q 003947 537 KEHLCVLKDSSK-PILFTMAR-LDR-VKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYGLID-TY 612 (784)
Q Consensus 537 ~~~~gll~~~~k-~iIl~vGR-L~~-~Kgi~~LieA~~~l~~~~~~v~LvIVG~g~~~~s~d~ee~~~~~~l~~li~-~l 612 (784)
++++|+ +.++ .+.+..|. -.. .+....+++++.+++++.|+.++++--.... .+.+..... ..
T Consensus 179 r~~l~~--~~~~~~lalLPGSR~sEI~rl~~~f~~a~~~l~~~~~~~~~vlp~~~~~-----------~~~~~~~~~~~~ 245 (381)
T COG0763 179 REKLGI--DADEKTLALLPGSRRSEIRRLLPPFVQAAQELKARYPDLKFVLPLVNAK-----------YRRIIEEALKWE 245 (381)
T ss_pred HHHhCC--CCCCCeEEEecCCcHHHHHHHHHHHHHHHHHHHhhCCCceEEEecCcHH-----------HHHHHHHHhhcc
Confidence 456776 4444 44566663 222 4667788899999998999999999775521 122222222 22
Q ss_pred CCCCcEEEccCcCCcCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEc
Q 003947 613 KLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFAT 670 (784)
Q Consensus 613 ~L~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMA~GlPVIaT 670 (784)
.....+... .++-+..++. ||+.+..| |.+.+|+|.+|+|.|++
T Consensus 246 ~~~~~~~~~--------~~~~~~a~~~-aD~al~aS-----GT~tLE~aL~g~P~Vv~ 289 (381)
T COG0763 246 VAGLSLILI--------DGEKRKAFAA-ADAALAAS-----GTATLEAALAGTPMVVA 289 (381)
T ss_pred ccCceEEec--------CchHHHHHHH-hhHHHHhc-----cHHHHHHHHhCCCEEEE
Confidence 211222332 2456777774 88877665 99999999999999987
No 129
>cd04300 GT1_Glycogen_Phosphorylase This is a family of oligosaccharide phosphorylases. It includes yeast and mammalian glycogen phosphorylases, plant starch/glucan phosphorylase, as well as the maltodextrin phosphorylases of bacteria. The members of this family catalyze the breakdown of oligosaccharides into glucose-1-phosphate units. They are important allosteric enzymes in carbohydrate metabolism. The allosteric control mechanisms of yeast and mammalian members of this family are different from that of bacterial members. The members of this family belong to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=97.58 E-value=0.0012 Score=79.43 Aligned_cols=151 Identities=15% Similarity=0.101 Sum_probs=109.8
Q ss_pred hhhccccCCCCCEEEEEecccCCCChHH-HH---HHHHHhHccC----CCeEEEEEeCCCCCCcccHHHHHHHHHHHHHH
Q 003947 538 EHLCVLKDSSKPILFTMARLDRVKNLTG-LV---EWYGKNAKLR----ELVNLVVVGGDRRKESKDLEEQAEMKKMYGLI 609 (784)
Q Consensus 538 ~~~gll~~~~k~iIl~vGRL~~~Kgi~~-Li---eA~~~l~~~~----~~v~LvIVG~g~~~~s~d~ee~~~~~~l~~li 609 (784)
++.|+.-+|+...++++-|+...|.... ++ +.+.++++.. ....+++.|...+. +...+..++.+..++
T Consensus 520 ~~~g~~ldp~slfdvq~KR~heYKRq~LNil~ii~~y~~i~~~p~~~~~P~~~IFaGKAaP~---y~~aK~iIklI~~va 596 (797)
T cd04300 520 KTTGVEVDPDSLFDVQVKRIHEYKRQLLNVLHIIHLYNRIKENPNADIVPRTFIFGGKAAPG---YYMAKLIIKLINAVA 596 (797)
T ss_pred HHhCCccCCCccEEEEeeechhhhhhhhHHHhhHHHHHHHHhCCCcCCCCeEEEEeccCCCC---cHHHHHHHHHHHHHH
Confidence 3456666889999999999999999988 44 4555555421 23667777765542 445556666666666
Q ss_pred Hh----cCCCC--cEEEccCcCCcCChhHHHHHHHccccEEEeCCC--CCCCcHHHHHHHHcCCcEEEcCcccccccccc
Q 003947 610 DT----YKLNG--QFRWISSQMNRVRNGELYRYICDTKGAFVQPAL--YEAFGLTVVEAMTCGLPTFATCNGGPAEIIVH 681 (784)
Q Consensus 610 ~~----l~L~~--~V~flG~~~~~v~~~el~~~la~aadvfV~PS~--~E~fGltvlEAMA~GlPVIaT~~GG~~EiI~d 681 (784)
+. ..+.+ +|.|+. ..+. .+.+.+-.++|+-.+-|. .|+.|..-+=+|.-|.++++|-.|...|+.++
T Consensus 597 ~~in~Dp~v~~~lkVVFle----nY~V-slAe~iipaaDvseqis~ag~EASGTsnMK~~lNGaltlgtlDGanvEi~e~ 671 (797)
T cd04300 597 DVVNNDPDVGDKLKVVFLP----NYNV-SLAEKIIPAADLSEQISTAGKEASGTGNMKFMLNGALTIGTLDGANVEIAEE 671 (797)
T ss_pred HHhccChhcCCceEEEEeC----CCCh-HHHHHhhhhhhhhhhCCCCCccccCCchhhHHhcCceeeecccchhHHHHHH
Confidence 63 33455 788886 3334 344555447999999887 89999999999999999999999999999987
Q ss_pred --CceEEEECCCCHHHHH
Q 003947 682 --GKSGFHIDPYKGDQAT 697 (784)
Q Consensus 682 --g~~G~li~p~d~e~lA 697 (784)
++|+|+|-. +.++..
T Consensus 672 vG~eN~fiFG~-~~~ev~ 688 (797)
T cd04300 672 VGEENIFIFGL-TAEEVE 688 (797)
T ss_pred hCcCcEEEeCC-CHHHHH
Confidence 789999964 445444
No 130
>COG3914 Spy Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones]
Probab=97.57 E-value=0.0015 Score=74.77 Aligned_cols=181 Identities=13% Similarity=0.123 Sum_probs=123.2
Q ss_pred hhhccccCCCCCEEEEEecccCCCChHHHHHHHHHhHccCCCeEEEEEeCCCCCCcccHHHHHHHHHHHHHHHhcCCC-C
Q 003947 538 EHLCVLKDSSKPILFTMARLDRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYGLIDTYKLN-G 616 (784)
Q Consensus 538 ~~~gll~~~~k~iIl~vGRL~~~Kgi~~LieA~~~l~~~~~~v~LvIVG~g~~~~s~d~ee~~~~~~l~~li~~l~L~-~ 616 (784)
...|+ +++..++++.++ ..|-...+++.+.++.+.-|+..|++-|+|++ .+....+++++++.|+. +
T Consensus 422 ~~lgl--p~~avVf~c~~n--~~K~~pev~~~wmqIL~~vP~Svl~L~~~~~~--------~~~~~~l~~la~~~Gv~~e 489 (620)
T COG3914 422 AQLGL--PEDAVVFCCFNN--YFKITPEVFALWMQILSAVPNSVLLLKAGGDD--------AEINARLRDLAEREGVDSE 489 (620)
T ss_pred hhcCC--CCCeEEEEecCC--cccCCHHHHHHHHHHHHhCCCcEEEEecCCCc--------HHHHHHHHHHHHHcCCChh
Confidence 45787 555555555554 45666666666666666679999999999854 24467789999999985 7
Q ss_pred cEEEccCcCCcCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEc-------Cccccccccc-cCceEEEE
Q 003947 617 QFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFAT-------CNGGPAEIIV-HGKSGFHI 688 (784)
Q Consensus 617 ~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMA~GlPVIaT-------~~GG~~EiI~-dg~~G~li 688 (784)
+++|.+ +.++++-.+.+. -+|+++=+--|-| +.|.+||+.||+||++- +.|+ .++. -|..-.+.
T Consensus 490 RL~f~p----~~~~~~h~a~~~-iADlvLDTyPY~g-~TTa~daLwm~vPVlT~~G~~FasR~~~--si~~~agi~e~vA 561 (620)
T COG3914 490 RLRFLP----PAPNEDHRARYG-IADLVLDTYPYGG-HTTASDALWMGVPVLTRVGEQFASRNGA--SIATNAGIPELVA 561 (620)
T ss_pred heeecC----CCCCHHHHHhhc-hhheeeecccCCC-ccchHHHHHhcCceeeeccHHHHHhhhH--HHHHhcCCchhhc
Confidence 899998 666777777777 5999987654544 56899999999999863 2222 1222 13333344
Q ss_pred CCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHH--hCCHHHHHHHHHHHHHH
Q 003947 689 DPYKGDQATGILVDFFEKCKVDPGHWDEISQGGLKRIQE--KYTWKIYSERLLNLSGV 744 (784)
Q Consensus 689 ~p~d~e~lAe~I~~~l~~ll~dp~~~~~m~~~a~~~v~~--~ytw~~~a~~ll~ly~~ 744 (784)
+ +.++..++-. .+-.|...+++.+..-.+.... -|+.+..++++.++|..
T Consensus 562 ~--s~~dYV~~av----~~g~dral~q~~r~~l~~~r~tspL~d~~~far~le~~y~~ 613 (620)
T COG3914 562 D--SRADYVEKAV----AFGSDRALRQQVRAELKRSRQTSPLFDPKAFARKLETLYWG 613 (620)
T ss_pred C--CHHHHHHHHH----HhcccHHHHHhhHHHHHhccccCcccCHHHHHHHHHHHHHH
Confidence 3 3444444333 3457887787776665555444 48999999999999864
No 131
>PRK01021 lpxB lipid-A-disaccharide synthase; Reviewed
Probab=97.40 E-value=0.021 Score=67.17 Aligned_cols=197 Identities=16% Similarity=0.127 Sum_probs=109.8
Q ss_pred CCCceEEEE-cCCChhHHHHHHHHhCCC--cEEEEecCCcccCCCCCcchhhhccccccccchhhhhHHHhcccCEEEec
Q 003947 381 QCKPDLIIG-NYSDGNIVASLLAHKLDV--TQCTIAHALELTKYPDSDINWKKLDDKYHFSCQFTADLFAMNRTDFIITS 457 (784)
Q Consensus 381 ~~~pDIIh~-~~~~~~lva~llar~~gv--p~V~t~H~l~~~k~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~ 457 (784)
..+||++++ -+++.|+-....+|+.|+ |+++.+-- +-.-|+.-. -+..-+..|.++|.
T Consensus 308 ~~kPD~vIlID~PgFNlrLAK~lkk~Gi~ipviyYVsP--------qVWAWR~~R-----------ikki~k~vD~ll~I 368 (608)
T PRK01021 308 KTNPRTVICIDFPDFHFLLIKKLRKRGYKGKIVHYVCP--------SIWAWRPKR-----------KTILEKYLDLLLLI 368 (608)
T ss_pred hcCCCEEEEeCCCCCCHHHHHHHHhcCCCCCEEEEECc--------cceeeCcch-----------HHHHHHHhhhheec
Confidence 459999996 555558755556677785 87654431 112232211 11234567999898
Q ss_pred ChHhHhhccccccccccccccccccceeeecCCCCCCCceEEecCC-CCCCCCCCCcHHHHhhhcchhhhHHhhcCchhh
Q 003947 458 TFQEIAGSKDTVGQYESHTAFSLPGLYRVVNGIDAFDPKFNIVSPG-ADMTIYFPYMEEKRRLKHFHSEIEELLYSPVEN 536 (784)
Q Consensus 458 S~~~~~~~~~~vgqYe~~~~f~~p~l~~~~~gi~~f~~k~~VIpnG-vD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~ 536 (784)
=+-|.+ +|+ .+| -++..|.|. +|.-...+..+ +.
T Consensus 369 fPFE~~-------------------~y~-~~g-----v~v~yVGHPL~d~i~~~~~~~--------------------~~ 403 (608)
T PRK01021 369 LPFEQN-------------------LFK-DSP-----LRTVYLGHPLVETISSFSPNL--------------------SW 403 (608)
T ss_pred CccCHH-------------------HHH-hcC-----CCeEEECCcHHhhcccCCCHH--------------------HH
Confidence 887765 222 123 345556443 44421112211 22
Q ss_pred hhhhccccCCCCCEE-EEEe-cccC-CCChHHHHHHHH--HhHccCCCeEEEEEeCCCCCCcccHHHHHHHHHHHHHHHh
Q 003947 537 KEHLCVLKDSSKPIL-FTMA-RLDR-VKNLTGLVEWYG--KNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYGLIDT 611 (784)
Q Consensus 537 ~~~~gll~~~~k~iI-l~vG-RL~~-~Kgi~~LieA~~--~l~~~~~~v~LvIVG~g~~~~s~d~ee~~~~~~l~~li~~ 611 (784)
++++|+ ++++++| +..| |-.+ .+.++.+++++. .+. ++.++++.... . ...+.+.+.++.
T Consensus 404 r~~lgl--~~~~~iIaLLPGSR~~EI~rllPv~l~aa~~~~l~---~~l~fvvp~a~-~---------~~~~~i~~~~~~ 468 (608)
T PRK01021 404 KEQLHL--PSDKPIVAAFPGSRRGDILRNLTIQVQAFLASSLA---STHQLLVSSAN-P---------KYDHLILEVLQQ 468 (608)
T ss_pred HHHcCC--CCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHhc---cCeEEEEecCc-h---------hhHHHHHHHHhh
Confidence 355676 4455554 5666 3333 466788888887 443 35778775332 1 112334444433
Q ss_pred cCCCCcEEEccCcCCcCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEc
Q 003947 612 YKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFAT 670 (784)
Q Consensus 612 l~L~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMA~GlPVIaT 670 (784)
.+. -.+..+. ..+-+..++ +||+.+..| |.+.+|++.+|+|.|+.
T Consensus 469 ~~~-~~~~ii~-------~~~~~~~m~-aaD~aLaaS-----GTaTLEaAL~g~PmVV~ 513 (608)
T PRK01021 469 EGC-LHSHIVP-------SQFRYELMR-ECDCALAKC-----GTIVLETALNQTPTIVT 513 (608)
T ss_pred cCC-CCeEEec-------CcchHHHHH-hcCeeeecC-----CHHHHHHHHhCCCEEEE
Confidence 321 1233331 012367777 499999876 99999999999999985
No 132
>COG4641 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=97.38 E-value=0.01 Score=65.33 Aligned_cols=118 Identities=14% Similarity=0.072 Sum_probs=90.4
Q ss_pred CCcEEEccCcCCcCCh-hHHHHHHHccccEEEeCCC---CCC---CcHHHHHHHHcCCcEEEcCccccccccccCceEEE
Q 003947 615 NGQFRWISSQMNRVRN-GELYRYICDTKGAFVQPAL---YEA---FGLTVVEAMTCGLPTFATCNGGPAEIIVHGKSGFH 687 (784)
Q Consensus 615 ~~~V~flG~~~~~v~~-~el~~~la~aadvfV~PS~---~E~---fGltvlEAMA~GlPVIaT~~GG~~EiI~dg~~G~l 687 (784)
.+++..+| +... ..+...+.. .++++.-+. .++ +.+-+.|+|+||.|.+++...+..-.+.+|..-++
T Consensus 236 ~~~~~yIg----~~~~~~~v~~~~~~-~~~~~n~~r~~~~~~l~~~~~RvFeiagc~~~liT~~~~~~e~~f~pgk~~iv 310 (373)
T COG4641 236 EPNVQYIG----YYNPKDGVPNAFKR-DDVTLNINRASIANALFSPTNRVFEIAGCGGFLITDYWKDLEKFFKPGKDIIV 310 (373)
T ss_pred cchhhhhh----ccCccchhhhcccc-cceeeeecHHHHHhhcCCchhhHHHHhhcCCccccccHHHHHHhcCCchheEE
Confidence 34566666 3333 566666664 566555433 222 37789999999999999999999999988876555
Q ss_pred ECCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Q 003947 688 IDPYKGDQATGILVDFFEKCKVDPGHWDEISQGGLKRIQEKYTWKIYSERLLNLSG 743 (784)
Q Consensus 688 i~p~d~e~lAe~I~~~l~~ll~dp~~~~~m~~~a~~~v~~~ytw~~~a~~ll~ly~ 743 (784)
. .|..++.+++. .++..++.++++++.|.+++...||.+.-+.+++....
T Consensus 311 ~--~d~kdl~~~~~----yll~h~~erkeiae~~ye~V~~~ht~~~r~~~~~~~i~ 360 (373)
T COG4641 311 Y--QDSKDLKEKLK----YLLNHPDERKEIAECAYERVLARHTYEERIFKLLNEIA 360 (373)
T ss_pred e--cCHHHHHHHHH----HHhcCcchHHHHHHhhHHHHHHhccHHHHHHHHHHHHH
Confidence 5 58899999997 56789999999999999999999999988877766654
No 133
>PRK14986 glycogen phosphorylase; Provisional
Probab=97.38 E-value=0.0026 Score=76.67 Aligned_cols=152 Identities=14% Similarity=0.133 Sum_probs=112.8
Q ss_pred hhhccccCCCCCEEEEEecccCCCChHH-HHHH---HHHhHccC----CCeEEEEEeCCCCCCcccHHHHHHHHHHHHHH
Q 003947 538 EHLCVLKDSSKPILFTMARLDRVKNLTG-LVEW---YGKNAKLR----ELVNLVVVGGDRRKESKDLEEQAEMKKMYGLI 609 (784)
Q Consensus 538 ~~~gll~~~~k~iIl~vGRL~~~Kgi~~-LieA---~~~l~~~~----~~v~LvIVG~g~~~~s~d~ee~~~~~~l~~li 609 (784)
++.|..-+++...++++-|+...|.... ++.. +.++++.. ....+++.|...+. +...+..++.+..++
T Consensus 533 ~~~g~~ldp~sLfd~qakR~heYKRq~LNil~~i~ry~~i~~~p~~~~~P~~~IFaGKAaP~---y~~aK~iIk~I~~va 609 (815)
T PRK14986 533 QQLNVVVNPKALFDVQIKRIHEYKRQLMNVLHVITRYNRIKADPDAKWVPRVNIFAGKAASA---YYMAKHIIHLINDVA 609 (815)
T ss_pred HHhCCccCcccceeeeehhhhhhhhhhHHHhhhHHHHHHHHhCCCcCCCCeEEEEeecCCCC---cHHHHHHHHHHHHHH
Confidence 3447666888999999999999999988 5554 55554421 23678777766552 455666777777777
Q ss_pred H----hcCCCC--cEEEccCcCCcCChhHHHHHHHccccEEEeCCC--CCCCcHHHHHHHHcCCcEEEcCcccccccccc
Q 003947 610 D----TYKLNG--QFRWISSQMNRVRNGELYRYICDTKGAFVQPAL--YEAFGLTVVEAMTCGLPTFATCNGGPAEIIVH 681 (784)
Q Consensus 610 ~----~l~L~~--~V~flG~~~~~v~~~el~~~la~aadvfV~PS~--~E~fGltvlEAMA~GlPVIaT~~GG~~EiI~d 681 (784)
+ .-.+.+ +|.|+. ..+. .+.+.+-.++|+-.+-|. .|+.|..-+=||.-|.++++|-.|...|+.++
T Consensus 610 ~~in~Dp~v~~~lkVVFle----nY~v-slAe~lipg~Dv~eqis~ag~EASGTsnMK~alNGaLtlgtlDG~nvEi~e~ 684 (815)
T PRK14986 610 KVINNDPQIGDKLKVVFIP----NYSV-SLAQLIIPAADLSEQISLAGTEASGTSNMKFALNGALTIGTLDGANVEMLEH 684 (815)
T ss_pred HHhccChhhcCceeEEEeC----CCCH-HHHHHhhhhhhhhhhCCCCCccccCcchhhHHhcCceeeeccCCchhHHHHh
Confidence 7 334455 788886 3344 445555447999999887 89999999999999999999999999999986
Q ss_pred --CceEEEECCCCHHHHHH
Q 003947 682 --GKSGFHIDPYKGDQATG 698 (784)
Q Consensus 682 --g~~G~li~p~d~e~lAe 698 (784)
++|||.|-. +.++.++
T Consensus 685 vG~eN~~~fG~-~~~ev~~ 702 (815)
T PRK14986 685 VGEENIFIFGN-TAEEVEA 702 (815)
T ss_pred cCCCcEEEeCC-CHHHHHH
Confidence 889999964 4555444
No 134
>COG0381 WecB UDP-N-acetylglucosamine 2-epimerase [Cell envelope biogenesis, outer membrane]
Probab=97.35 E-value=0.079 Score=58.90 Aligned_cols=275 Identities=15% Similarity=0.149 Sum_probs=160.8
Q ss_pred CCCceEEEEcCCCh-hHHHHHHHHhCCCcEEEEecCCcccCCCCCcchhhhccccccccchhhhhHHHhcccCEEEecCh
Q 003947 381 QCKPDLIIGNYSDG-NIVASLLAHKLDVTQCTIAHALELTKYPDSDINWKKLDDKYHFSCQFTADLFAMNRTDFIITSTF 459 (784)
Q Consensus 381 ~~~pDIIh~~~~~~-~lva~llar~~gvp~V~t~H~l~~~k~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~ 459 (784)
..+||+|..|.-.. .++++++|...++|++..--++-. .+.+|.. .. .-...-.-||.-++.|.
T Consensus 90 ~~kPD~VlVhGDT~t~lA~alaa~~~~IpV~HvEAGlRt-----~~~~~PE---E~-------NR~l~~~~S~~hfapte 154 (383)
T COG0381 90 EEKPDLVLVHGDTNTTLAGALAAFYLKIPVGHVEAGLRT-----GDLYFPE---EI-------NRRLTSHLSDLHFAPTE 154 (383)
T ss_pred hhCCCEEEEeCCcchHHHHHHHHHHhCCceEEEeccccc-----CCCCCcH---HH-------HHHHHHHhhhhhcCChH
Confidence 45999998886544 667788999999998765555421 1111110 00 00112233566667776
Q ss_pred HhHhhccccccccccccccccccceeeecCCCCCCCceEEecCCCC-CCCCCCCcHHHHhhhcchhhhHHhhcCchhhhh
Q 003947 460 QEIAGSKDTVGQYESHTAFSLPGLYRVVNGIDAFDPKFNIVSPGAD-MTIYFPYMEEKRRLKHFHSEIEELLYSPVENKE 538 (784)
Q Consensus 460 ~~~~~~~~~vgqYe~~~~f~~p~l~~~~~gi~~f~~k~~VIpnGvD-~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~ 538 (784)
..++ +....|++ ..++.|+.|-+- .-.+. ..+.. .......
T Consensus 155 ~ar~--------------------nLl~EG~~--~~~IfvtGnt~iDal~~~-----~~~~~-----------~~~~~~~ 196 (383)
T COG0381 155 IARK--------------------NLLREGVP--EKRIFVTGNTVIDALLNT-----RDRVL-----------EDSKILA 196 (383)
T ss_pred HHHH--------------------HHHHcCCC--ccceEEeCChHHHHHHHH-----Hhhhc-----------cchhhHH
Confidence 6554 22234555 667888887431 10000 00000 0000001
Q ss_pred hhccccCCC-CCEEEEEecccCC-CChHHHHHHHHHhHccCCCeEEEEEeCCCCCCcccHHHHHHHHHHHHHH-HhcCCC
Q 003947 539 HLCVLKDSS-KPILFTMARLDRV-KNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYGLI-DTYKLN 615 (784)
Q Consensus 539 ~~gll~~~~-k~iIl~vGRL~~~-Kgi~~LieA~~~l~~~~~~v~LvIVG~g~~~~s~d~ee~~~~~~l~~li-~~l~L~ 615 (784)
.+ +.+++ +.+++++=|-.-. +++..+++++.++.+.++++.++.--... ..+++.. ..++-.
T Consensus 197 ~~--~~~~~~~~iLvT~HRreN~~~~~~~i~~al~~i~~~~~~~~viyp~H~~-------------~~v~e~~~~~L~~~ 261 (383)
T COG0381 197 KG--LDDKDKKYILVTAHRRENVGEPLEEICEALREIAEEYPDVIVIYPVHPR-------------PRVRELVLKRLKNV 261 (383)
T ss_pred hh--hccccCcEEEEEcchhhcccccHHHHHHHHHHHHHhCCCceEEEeCCCC-------------hhhhHHHHHHhCCC
Confidence 11 11334 4455555565533 99999999999999888777766644331 2233333 455556
Q ss_pred CcEEEccCcCCcCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcCcc-ccccccccCceEEEECCCCHH
Q 003947 616 GQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCNG-GPAEIIVHGKSGFHIDPYKGD 694 (784)
Q Consensus 616 ~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMA~GlPVIaT~~G-G~~EiI~dg~~G~li~p~d~e 694 (784)
++|..+. ++...+...++.. |-+.+-= .|-..=||-..|+||++-+.+ .-+|.++.| +-.++. .|.+
T Consensus 262 ~~v~li~----pl~~~~f~~L~~~-a~~iltD-----SGgiqEEAp~lg~Pvl~lR~~TERPE~v~ag-t~~lvg-~~~~ 329 (383)
T COG0381 262 ERVKLID----PLGYLDFHNLMKN-AFLILTD-----SGGIQEEAPSLGKPVLVLRDTTERPEGVEAG-TNILVG-TDEE 329 (383)
T ss_pred CcEEEeC----CcchHHHHHHHHh-ceEEEec-----CCchhhhHHhcCCcEEeeccCCCCccceecC-ceEEeC-ccHH
Confidence 6798886 7778888888875 5333322 265678999999999997443 456766555 445554 3566
Q ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Q 003947 695 QATGILVDFFEKCKVDPGHWDEISQGGLKRIQEKYTWKIYSERLLNLSGV 744 (784)
Q Consensus 695 ~lAe~I~~~l~~ll~dp~~~~~m~~~a~~~v~~~ytw~~~a~~ll~ly~~ 744 (784)
.+.+.+. .++++++..++|+.. ...|.=...++++.++...
T Consensus 330 ~i~~~~~----~ll~~~~~~~~m~~~-----~npYgdg~as~rIv~~l~~ 370 (383)
T COG0381 330 NILDAAT----ELLEDEEFYERMSNA-----KNPYGDGNASERIVEILLN 370 (383)
T ss_pred HHHHHHH----HHhhChHHHHHHhcc-----cCCCcCcchHHHHHHHHHH
Confidence 6666665 566899988888753 3556666666666666553
No 135
>PRK14985 maltodextrin phosphorylase; Provisional
Probab=97.33 E-value=0.0021 Score=77.20 Aligned_cols=145 Identities=11% Similarity=0.024 Sum_probs=105.3
Q ss_pred hhhccccCCCCCEEEEEecccCCCChHH-HHHH---HHHhHccC----CCeEEEEEeCCCCCCcccHHHHHHHHHHHHHH
Q 003947 538 EHLCVLKDSSKPILFTMARLDRVKNLTG-LVEW---YGKNAKLR----ELVNLVVVGGDRRKESKDLEEQAEMKKMYGLI 609 (784)
Q Consensus 538 ~~~gll~~~~k~iIl~vGRL~~~Kgi~~-LieA---~~~l~~~~----~~v~LvIVG~g~~~~s~d~ee~~~~~~l~~li 609 (784)
++.|+.-+++...++++-|+..+|.... ++.. +.++++.. ....+++.|...+. +...+..++.+..++
T Consensus 519 ~~~g~~ldp~slfdvq~kR~heYKRq~Lnil~ii~~y~~i~~~p~~~~~P~~~IFaGKAaP~---y~~aK~iIklI~~va 595 (798)
T PRK14985 519 QRTGIEINPQAIFDVQIKRLHEYKRQHLNLLHILALYKEIRENPQADRVPRVFLFGAKAAPG---YYLAKNIIFAINKVA 595 (798)
T ss_pred HHhCCccCchhcchhhHhhhhhhhhhhhHhhhhHHHHHHHHhCCCcCCCCeEEEEeecCCCC---cHHHHHHHHHHHHHH
Confidence 3446656788888999999999999888 5544 44444320 23678887766553 444555566666666
Q ss_pred Hhc----CCCC--cEEEccCcCCcCChhHHHHHHHccccEEEeCCC--CCCCcHHHHHHHHcCCcEEEcCcccccccccc
Q 003947 610 DTY----KLNG--QFRWISSQMNRVRNGELYRYICDTKGAFVQPAL--YEAFGLTVVEAMTCGLPTFATCNGGPAEIIVH 681 (784)
Q Consensus 610 ~~l----~L~~--~V~flG~~~~~v~~~el~~~la~aadvfV~PS~--~E~fGltvlEAMA~GlPVIaT~~GG~~EiI~d 681 (784)
+.. .+.+ +|.|+. ..+. .+.+.+-.++|+-.+-|. .|+.|..-+=+|.-|.++++|-.|...|+.++
T Consensus 596 ~~in~Dp~v~~~lkVVFle----nY~V-slAe~lipaaDvseqis~ag~EASGTsnMK~amNGaLtlgtlDGanvEi~e~ 670 (798)
T PRK14985 596 EVINNDPLVGDKLKVVFLP----DYCV-SAAELLIPAADISEQISTAGKEASGTGNMKLALNGALTVGTLDGANVEIAEQ 670 (798)
T ss_pred HHhcCChhhCCceeEEEeC----CCCh-HHHHHHhhhhhhhhhCCCCCccccCcchhHHHhcCceeeecccchHHHHHHH
Confidence 443 3445 788886 3344 344454447999999887 89999999999999999999999999999876
Q ss_pred --CceEEEECC
Q 003947 682 --GKSGFHIDP 690 (784)
Q Consensus 682 --g~~G~li~p 690 (784)
++|||.|-.
T Consensus 671 vG~eN~f~fG~ 681 (798)
T PRK14985 671 VGEENIFIFGH 681 (798)
T ss_pred hCcCcEEEeCC
Confidence 789999954
No 136
>COG0058 GlgP Glucan phosphorylase [Carbohydrate transport and metabolism]
Probab=97.30 E-value=0.0046 Score=73.73 Aligned_cols=143 Identities=16% Similarity=0.141 Sum_probs=111.3
Q ss_pred hccccCCCCCEEEEEecccCCCChHHHHH----HHHHhH-ccCCCeEEEEEeCCCCCCcccHHHHHHHHHHHHHHHhcCC
Q 003947 540 LCVLKDSSKPILFTMARLDRVKNLTGLVE----WYGKNA-KLRELVNLVVVGGDRRKESKDLEEQAEMKKMYGLIDTYKL 614 (784)
Q Consensus 540 ~gll~~~~k~iIl~vGRL~~~Kgi~~Lie----A~~~l~-~~~~~v~LvIVG~g~~~~s~d~ee~~~~~~l~~li~~l~L 614 (784)
.|+..+|+...++++-|+..+|.....+. .+..++ +..|.+.+++.|...+ .+...+.-++.+...++..+.
T Consensus 479 ~gi~~~p~~lfd~~~kRiheYKRq~Lnl~~i~~ly~~i~~d~~prv~~iFaGKAhP---~y~~aK~iIk~I~~~a~~in~ 555 (750)
T COG0058 479 TGIEVDPNALFDGQARRIHEYKRQLLNLLDIERLYRILKEDWVPRVQIIFAGKAHP---ADYAAKEIIKLINDVADVINN 555 (750)
T ss_pred cCCccCCCcceeeeehhhhhhhhhHHhHhhHHHHHHHHhcCCCCceEEEEeccCCC---cchHHHHHHHHHHHHHHhhcc
Confidence 34555788999999999999998877664 334444 3346677777776654 355666777888888888877
Q ss_pred CCcEEEccCcCCcCChhHHHHHHHccccEEEeCCC--CCCCcHHHHHHHHcCCcEEEcCccccccccc--cCceEEEECC
Q 003947 615 NGQFRWISSQMNRVRNGELYRYICDTKGAFVQPAL--YEAFGLTVVEAMTCGLPTFATCNGGPAEIIV--HGKSGFHIDP 690 (784)
Q Consensus 615 ~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~--~E~fGltvlEAMA~GlPVIaT~~GG~~EiI~--dg~~G~li~p 690 (784)
..+|.|+. ..+. .+.+.+-.++||-.+.|. .|+.|..-+-||.-|.++|+|-.|...|+.+ ++.|||.|-.
T Consensus 556 ~lkVvFl~----nYdv-slA~~iipa~Dvweqis~a~~EASGTsnMK~alNGaltigtlDGanvEi~e~vg~~N~~~fG~ 630 (750)
T COG0058 556 KLKVVFLP----NYDV-SLAELLIPAADVWEQIPTAGKEASGTSNMKAALNGALTLGTLDGANVEIYEHVGGENGWIFGE 630 (750)
T ss_pred cceEEEeC----CCCh-hHHHhhcccccccccCCCCCccccCcCcchHHhcCCceeeccccHHHHHHHhcCCCceEEeCC
Confidence 78899996 3333 445555447999999876 8999999999999999999999999999997 8999999954
No 137
>PRK10017 colanic acid biosynthesis protein; Provisional
Probab=97.12 E-value=0.4 Score=54.95 Aligned_cols=96 Identities=13% Similarity=0.140 Sum_probs=54.8
Q ss_pred HHHHHhcCCCCcEEEccCcCCcCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcCc----ccccccccc
Q 003947 606 YGLIDTYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCN----GGPAEIIVH 681 (784)
Q Consensus 606 ~~li~~l~L~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMA~GlPVIaT~~----GG~~EiI~d 681 (784)
+++.+.+.-+.+++.+. +..+..++..+++. +|++|-.-+ -..+=|+++|+|+|+-.+ -|+.+.+
T Consensus 297 ~~l~~~~~~~~~~~vi~---~~~~~~e~~~iIs~-~dl~ig~Rl-----Ha~I~a~~~gvP~i~i~Y~~K~~~~~~~l-- 365 (426)
T PRK10017 297 LNLRQHVSDPARYHVVM---DELNDLEMGKILGA-CELTVGTRL-----HSAIISMNFGTPAIAINYEHKSAGIMQQL-- 365 (426)
T ss_pred HHHHHhcccccceeEec---CCCChHHHHHHHhh-CCEEEEecc-----hHHHHHHHcCCCEEEeeehHHHHHHHHHc--
Confidence 34444444344455443 13345688899995 999885432 156779999999999633 2333333
Q ss_pred CceEEEECC--CCHHHHHHHHHHHHHHhcCCHHHHHH
Q 003947 682 GKSGFHIDP--YKGDQATGILVDFFEKCKVDPGHWDE 716 (784)
Q Consensus 682 g~~G~li~p--~d~e~lAe~I~~~l~~ll~dp~~~~~ 716 (784)
|...++++. -+.+++.+++. ++++|.+.+++
T Consensus 366 g~~~~~~~~~~l~~~~Li~~v~----~~~~~r~~~~~ 398 (426)
T PRK10017 366 GLPEMAIDIRHLLDGSLQAMVA----DTLGQLPALNA 398 (426)
T ss_pred CCccEEechhhCCHHHHHHHHH----HHHhCHHHHHH
Confidence 333344443 34556666665 45567654443
No 138
>PLN02863 UDP-glucoronosyl/UDP-glucosyl transferase family protein
Probab=97.00 E-value=1.1 Score=52.35 Aligned_cols=117 Identities=15% Similarity=0.168 Sum_probs=62.8
Q ss_pred cEEEccCcCCcCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcCcc----ccccccc-cCceEEEECC-
Q 003947 617 QFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCNG----GPAEIIV-HGKSGFHIDP- 690 (784)
Q Consensus 617 ~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMA~GlPVIaT~~G----G~~EiI~-dg~~G~li~p- 690 (784)
+++..+ +++..++... .+.++||.- -|+ ++++||+++|+|+|+-... -....+. .-..|.-+..
T Consensus 344 g~~v~~----w~PQ~~vL~h--~~v~~fvtH---~G~-nS~~Eal~~GvP~l~~P~~~DQ~~na~~v~~~~gvG~~~~~~ 413 (477)
T PLN02863 344 GLVIRG----WAPQVAILSH--RAVGAFLTH---CGW-NSVLEGLVAGVPMLAWPMAADQFVNASLLVDELKVAVRVCEG 413 (477)
T ss_pred CEEecC----CCCHHHHhcC--CCcCeEEec---CCc-hHHHHHHHcCCCEEeCCccccchhhHHHHHHhhceeEEeccC
Confidence 466666 6666555542 125677753 233 4899999999999996333 3344433 3357776632
Q ss_pred ----CCHHHHHHHHHHHHHHhcCCHHHHH---HHHHHHHHHHHHhCCHHHHHHHHHHHHHHhh
Q 003947 691 ----YKGDQATGILVDFFEKCKVDPGHWD---EISQGGLKRIQEKYTWKIYSERLLNLSGVYG 746 (784)
Q Consensus 691 ----~d~e~lAe~I~~~l~~ll~dp~~~~---~m~~~a~~~v~~~ytw~~~a~~ll~ly~~~~ 746 (784)
-+.+++++++.+.+. .+++.++ ++++.+++-+.+.=+-.+..+++.+-...+|
T Consensus 414 ~~~~~~~~~v~~~v~~~m~---~~~~~r~~a~~l~e~a~~Av~~gGSS~~~l~~~v~~i~~~~ 473 (477)
T PLN02863 414 ADTVPDSDELARVFMESVS---ENQVERERAKELRRAALDAIKERGSSVKDLDGFVKHVVELG 473 (477)
T ss_pred CCCCcCHHHHHHHHHHHhh---ccHHHHHHHHHHHHHHHHHhccCCcHHHHHHHHHHHHHHhc
Confidence 256777777776542 3444332 2333333333333333444455555444444
No 139
>PLN02208 glycosyltransferase family protein
Probab=96.95 E-value=1.2 Score=51.45 Aligned_cols=156 Identities=8% Similarity=-0.036 Sum_probs=76.8
Q ss_pred CCCCEEEEEecccCCCChHHHHHHHHHhHccCCCeEEEEEeCCCCCCcccHHHHHHHHHHHHHHHhcCCCCcEEEccCcC
Q 003947 546 SSKPILFTMARLDRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYGLIDTYKLNGQFRWISSQM 625 (784)
Q Consensus 546 ~~k~iIl~vGRL~~~Kgi~~LieA~~~l~~~~~~v~LvIVG~g~~~~s~d~ee~~~~~~l~~li~~l~L~~~V~flG~~~ 625 (784)
++..+.++.|.+.. -..+.+.+.+..+....-... +++-...+.. +..+ ..-+.+.+.++. .++.+.+
T Consensus 250 ~~sVvyvSfGS~~~-l~~~q~~e~~~~l~~s~~pf~-wv~r~~~~~~--~~~~-~lp~~f~~r~~~----~g~~v~~--- 317 (442)
T PLN02208 250 PKSVVFCSLGSQII-LEKDQFQELCLGMELTGLPFL-IAVKPPRGSS--TVQE-GLPEGFEERVKG----RGVVWGG--- 317 (442)
T ss_pred CCcEEEEecccccc-CCHHHHHHHHHHHHhCCCcEE-EEEeCCCccc--chhh-hCCHHHHHHHhc----CCcEeec---
Confidence 34567788888763 244556665555422222343 3333211100 0000 001122222222 2344444
Q ss_pred CcCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcCc----ccccccccc-CceEEEECCC-----CHHH
Q 003947 626 NRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCN----GGPAEIIVH-GKSGFHIDPY-----KGDQ 695 (784)
Q Consensus 626 ~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMA~GlPVIaT~~----GG~~EiI~d-g~~G~li~p~-----d~e~ 695 (784)
++|..++... . +.++||.= -| -++++||+++|+|+|+-.. ......+.+ -..|..++.. +.++
T Consensus 318 -W~PQ~~iL~H-~-~v~~FvtH---cG-~nS~~Eai~~GVP~l~~P~~~DQ~~na~~~~~~~g~gv~~~~~~~~~~~~~~ 390 (442)
T PLN02208 318 -WVQQPLILDH-P-SIGCFVNH---CG-PGTIWESLVSDCQMVLIPFLSDQVLFTRLMTEEFEVSVEVSREKTGWFSKES 390 (442)
T ss_pred -cCCHHHHhcC-C-ccCeEEcc---CC-chHHHHHHHcCCCEEecCcchhhHHHHHHHHHHhceeEEeccccCCcCcHHH
Confidence 5666665542 1 12345532 22 2489999999999999633 333444333 3567777542 5567
Q ss_pred HHHHHHHHHHHhcCCH-HHHHHHHHHHHHH
Q 003947 696 ATGILVDFFEKCKVDP-GHWDEISQGGLKR 724 (784)
Q Consensus 696 lAe~I~~~l~~ll~dp-~~~~~m~~~a~~~ 724 (784)
++++|.++ +.++ +..+++.+++++.
T Consensus 391 l~~ai~~~----m~~~~e~g~~~r~~~~~~ 416 (442)
T PLN02208 391 LSNAIKSV----MDKDSDLGKLVRSNHTKL 416 (442)
T ss_pred HHHHHHHH----hcCCchhHHHHHHHHHHH
Confidence 77777654 4554 3445555555443
No 140
>PF12000 Glyco_trans_4_3: Gkycosyl transferase family 4 group; InterPro: IPR022623 This presumed domain is functionally uncharacterised and found in bacteria. This region is about 170 amino acids in length and is found N-terminal to PF00534 from PFAM. There is a single completely conserved residue G that may be functionally important.
Probab=96.92 E-value=0.0054 Score=61.19 Aligned_cols=108 Identities=22% Similarity=0.342 Sum_probs=61.3
Q ss_pred HHHHHHHcCCCceEEEEcCCChhHHHHHHHHhC-CCcEEEEe----cCCccc-CCCCCcchhhhccccccccchhhhhHH
Q 003947 373 ATEIIQELQCKPDLIIGNYSDGNIVASLLAHKL-DVTQCTIA----HALELT-KYPDSDINWKKLDDKYHFSCQFTADLF 446 (784)
Q Consensus 373 ~~~i~~~~~~~pDIIh~~~~~~~lva~llar~~-gvp~V~t~----H~l~~~-k~~~s~~~~~~~~~~y~~~~~~~~e~~ 446 (784)
+..+++. +..||||++|..+|.. ..++... ++|++.-+ |.-... .+ +... -.......+...+.+.-+.
T Consensus 57 ~~~L~~~-Gf~PDvI~~H~GWGe~--Lflkdv~P~a~li~Y~E~~y~~~g~d~~F-Dpe~-p~~~~~~~~~r~rN~~~l~ 131 (171)
T PF12000_consen 57 ARQLRAQ-GFVPDVIIAHPGWGET--LFLKDVFPDAPLIGYFEFYYRASGADVGF-DPEF-PPSLDDRARLRMRNAHNLL 131 (171)
T ss_pred HHHHHHc-CCCCCEEEEcCCcchh--hhHHHhCCCCcEEEEEEEEecCCCCcCCC-CCCC-CCCHHHHHHHHHHhHHHHH
Confidence 3344443 6689999999988733 3345444 67766322 111100 00 0000 0111222233333345567
Q ss_pred HhcccCEEEecChHhHhhccccccccccccccccccceeeecCCCCCCCceEEecCCCCCCCC
Q 003947 447 AMNRTDFIITSTFQEIAGSKDTVGQYESHTAFSLPGLYRVVNGIDAFDPKFNIVSPGADMTIY 509 (784)
Q Consensus 447 a~~~AD~IIt~S~~~~~~~~~~vgqYe~~~~f~~p~l~~~~~gi~~f~~k~~VIpnGvD~~~f 509 (784)
++..||..|+.|.-.+. +| |. .+.+|+.||+-|||++.+
T Consensus 132 ~l~~~D~~isPT~wQ~~-------~f--------P~---------~~r~kI~VihdGiDt~~~ 170 (171)
T PF12000_consen 132 ALEQADAGISPTRWQRS-------QF--------PA---------EFRSKISVIHDGIDTDRF 170 (171)
T ss_pred HHHhCCcCcCCCHHHHH-------hC--------CH---------HHHcCcEEeecccchhhc
Confidence 89999999999977665 11 22 235699999999999764
No 141
>PLN00414 glycosyltransferase family protein
Probab=96.88 E-value=1.3 Score=51.03 Aligned_cols=156 Identities=8% Similarity=0.011 Sum_probs=79.1
Q ss_pred CCCCEEEEEecccCCCChHHHHHHHHHhHccCCCeEEEEEeCCCCCCcccHHHHHHHHHHHHHHHhcCCCCcEEEccCcC
Q 003947 546 SSKPILFTMARLDRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYGLIDTYKLNGQFRWISSQM 625 (784)
Q Consensus 546 ~~k~iIl~vGRL~~~Kgi~~LieA~~~l~~~~~~v~LvIVG~g~~~~s~d~ee~~~~~~l~~li~~l~L~~~V~flG~~~ 625 (784)
++..+.++.|.+... .-+.+.|....+......+-.|+. ...... +..+ ..-+.+.+.++.. + ..+.|
T Consensus 251 ~~sVvyvsfGS~~~~-~~~q~~e~a~gL~~s~~~Flwvvr-~~~~~~--~~~~-~lp~~f~~r~~~~---g-~vv~~--- 318 (446)
T PLN00414 251 PGSVVFCAFGTQFFF-EKDQFQEFCLGMELTGLPFLIAVM-PPKGSS--TVQE-ALPEGFEERVKGR---G-IVWEG--- 318 (446)
T ss_pred CCceEEEeecccccC-CHHHHHHHHHHHHHcCCCeEEEEe-cCCCcc--cchh-hCChhHHHHhcCC---C-eEEec---
Confidence 345567788887643 234666655555443333333332 210100 0000 0111233333322 2 33334
Q ss_pred CcCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcCcc----ccccccc-cCceEEEECC-----CCHHH
Q 003947 626 NRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCNG----GPAEIIV-HGKSGFHIDP-----YKGDQ 695 (784)
Q Consensus 626 ~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMA~GlPVIaT~~G----G~~EiI~-dg~~G~li~p-----~d~e~ 695 (784)
+++..++.+. . +.++||.- -| -++++||+++|+|+|+.... -.+..+. .-..|..+.. -+.++
T Consensus 319 -w~PQ~~vL~h-~-~v~~fvtH---~G-~nS~~Ea~~~GvP~l~~P~~~dQ~~na~~~~~~~g~g~~~~~~~~~~~~~~~ 391 (446)
T PLN00414 319 -WVEQPLILSH-P-SVGCFVNH---CG-FGSMWESLVSDCQIVFIPQLADQVLITRLLTEELEVSVKVQREDSGWFSKES 391 (446)
T ss_pred -cCCHHHHhcC-C-ccceEEec---Cc-hhHHHHHHHcCCCEEecCcccchHHHHHHHHHHhCeEEEeccccCCccCHHH
Confidence 5566665542 1 23567753 23 35899999999999997433 3344553 4457777743 35677
Q ss_pred HHHHHHHHHHHhcCCH-HHHHHHHHHHHHH
Q 003947 696 ATGILVDFFEKCKVDP-GHWDEISQGGLKR 724 (784)
Q Consensus 696 lAe~I~~~l~~ll~dp-~~~~~m~~~a~~~ 724 (784)
+++++.+++ .++ +..+++.+++++.
T Consensus 392 i~~~v~~~m----~~~~e~g~~~r~~a~~~ 417 (446)
T PLN00414 392 LRDTVKSVM----DKDSEIGNLVKRNHKKL 417 (446)
T ss_pred HHHHHHHHh----cCChhhHHHHHHHHHHH
Confidence 777776544 454 4455555555544
No 142
>TIGR02093 P_ylase glycogen/starch/alpha-glucan phosphorylases. This family consists of phosphorylases. Members use phosphate to break alpha 1,4 linkages between pairs of glucose residues at the end of long glucose polymers, releasing alpha-D-glucose 1-phosphate. The nomenclature convention is to preface the name according to the natural substrate, as in glycogen phosphorylase, starch phosphorylase, maltodextrin phosphorylase, etc. Name differences among these substrates reflect differences in patterns of branching with alpha 1,6 linkages. Members include allosterically regulated and unregulated forms. A related family, TIGR02094, contains examples known to act well on particularly small alpha 1,4 glucans, as may be found after import from exogenous sources.
Probab=96.82 E-value=0.0087 Score=72.07 Aligned_cols=152 Identities=16% Similarity=0.106 Sum_probs=108.9
Q ss_pred hhhccccCCCCCEEEEEecccCCCChHH-HHH---HHHHhHccC----CCeEEEEEeCCCCCCcccHHHHHHHHHHHHHH
Q 003947 538 EHLCVLKDSSKPILFTMARLDRVKNLTG-LVE---WYGKNAKLR----ELVNLVVVGGDRRKESKDLEEQAEMKKMYGLI 609 (784)
Q Consensus 538 ~~~gll~~~~k~iIl~vGRL~~~Kgi~~-Lie---A~~~l~~~~----~~v~LvIVG~g~~~~s~d~ee~~~~~~l~~li 609 (784)
++.|+.-+++...++++-|+..+|.... ++. .+.++++.. ....+++.|...+. +...+.-++.+..++
T Consensus 517 ~~~g~~ldp~slfdvq~KR~heYKRq~LNil~ii~~y~~i~~~p~~~~~P~~~IFaGKAaP~---y~~aK~iIklI~~va 593 (794)
T TIGR02093 517 EHTGVEVDPNSIFDVQVKRLHEYKRQLLNVLHVIYLYNRIKEDPPKDIVPRTVIFGGKAAPG---YHMAKLIIKLINSVA 593 (794)
T ss_pred HhcCCccCccccchhhheechhhhHHHHHHhhhHHHHHHHHhCCCcCCCCeEEEEEecCCCC---cHHHHHHHHHHHHHH
Confidence 3456666888889999999999999888 554 455554421 13577777766542 444555566666666
Q ss_pred Hh----cCCCC--cEEEccCcCCcCChhHHHHHHHccccEEEeCCC--CCCCcHHHHHHHHcCCcEEEcCcccccccccc
Q 003947 610 DT----YKLNG--QFRWISSQMNRVRNGELYRYICDTKGAFVQPAL--YEAFGLTVVEAMTCGLPTFATCNGGPAEIIVH 681 (784)
Q Consensus 610 ~~----l~L~~--~V~flG~~~~~v~~~el~~~la~aadvfV~PS~--~E~fGltvlEAMA~GlPVIaT~~GG~~EiI~d 681 (784)
+. ..+.+ +|.|+. ..+. .+.+.+-.++|+-.+-|. .|+.|..-+=+|.-|.++++|-.|...|+.++
T Consensus 594 ~~iN~Dp~v~~~lkVVFle----nY~V-slAe~iipaaDvseqistag~EASGTsnMK~alNGaltlgtlDGanvEi~e~ 668 (794)
T TIGR02093 594 EVVNNDPAVGDKLKVVFVP----NYNV-SLAELIIPAADLSEQISTAGKEASGTGNMKFMLNGALTIGTLDGANVEIREE 668 (794)
T ss_pred HHhccChhhCCceeEEEeC----CCCh-HHHHHhhhhhhhhhhCCCCCccccCcchhHHHhcCcceeecccchhHHHHHH
Confidence 43 22455 788886 3344 344444447999999887 89999999999999999999999999999987
Q ss_pred --CceEEEECCCCHHHHHH
Q 003947 682 --GKSGFHIDPYKGDQATG 698 (784)
Q Consensus 682 --g~~G~li~p~d~e~lAe 698 (784)
++|+|+|-. +.++..+
T Consensus 669 vG~eN~fiFG~-~~~ev~~ 686 (794)
T TIGR02093 669 VGAENIFIFGL-TVEEVEA 686 (794)
T ss_pred hCcccEEEcCC-CHHHHHH
Confidence 789999964 4555443
No 143
>PLN02562 UDP-glycosyltransferase
Probab=96.80 E-value=1.5 Score=50.56 Aligned_cols=88 Identities=17% Similarity=0.127 Sum_probs=55.5
Q ss_pred CCcEEEccCcCCcCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcC----cccccccccc-CceEEEEC
Q 003947 615 NGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATC----NGGPAEIIVH-GKSGFHID 689 (784)
Q Consensus 615 ~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMA~GlPVIaT~----~GG~~EiI~d-g~~G~li~ 689 (784)
.+++...+ +++..++... . +.++||.= -| -++++||+.+|+|+|+.. ....+..+.+ -..|+-+.
T Consensus 327 ~~~~~v~~----w~PQ~~iL~h-~-~v~~fvtH---~G-~nS~~Eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~~~ 396 (448)
T PLN02562 327 SKQGKVVS----WAPQLEVLKH-Q-AVGCYLTH---CG-WNSTMEAIQCQKRLLCYPVAGDQFVNCAYIVDVWKIGVRIS 396 (448)
T ss_pred ccCEEEEe----cCCHHHHhCC-C-ccceEEec---Cc-chhHHHHHHcCCCEEeCCcccchHHHHHHHHHHhCceeEeC
Confidence 35666666 6777676653 1 13456642 23 348999999999999863 3334555544 24677765
Q ss_pred CCCHHHHHHHHHHHHHHhcCCHHHHHH
Q 003947 690 PYKGDQATGILVDFFEKCKVDPGHWDE 716 (784)
Q Consensus 690 p~d~e~lAe~I~~~l~~ll~dp~~~~~ 716 (784)
.-+.+++++++.++ +.|++++++
T Consensus 397 ~~~~~~l~~~v~~~----l~~~~~r~~ 419 (448)
T PLN02562 397 GFGQKEVEEGLRKV----MEDSGMGER 419 (448)
T ss_pred CCCHHHHHHHHHHH----hCCHHHHHH
Confidence 55778888888754 467665443
No 144
>PLN02554 UDP-glycosyltransferase family protein
Probab=96.73 E-value=1.8 Score=50.44 Aligned_cols=87 Identities=15% Similarity=0.087 Sum_probs=49.6
Q ss_pred CcEEEccCcCCcCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcCccc----cc-cccccCceEEEECC
Q 003947 616 GQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCNGG----PA-EIIVHGKSGFHIDP 690 (784)
Q Consensus 616 ~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMA~GlPVIaT~~GG----~~-EiI~dg~~G~li~p 690 (784)
+++.+.+ ++|..++... . +.++||.= -|+ ++++||+.+|+|+|+....+ .+ ..++.-..|..++.
T Consensus 342 ~~g~v~~----W~PQ~~iL~H-~-~v~~FvtH---~G~-nS~~Ea~~~GVP~l~~P~~~DQ~~Na~~~v~~~g~Gv~l~~ 411 (481)
T PLN02554 342 DIGKVIG----WAPQVAVLAK-P-AIGGFVTH---CGW-NSILESLWFGVPMAAWPLYAEQKFNAFEMVEELGLAVEIRK 411 (481)
T ss_pred cCceEEe----eCCHHHHhCC-c-ccCccccc---Ccc-chHHHHHHcCCCEEecCccccchhhHHHHHHHhCceEEeec
Confidence 4555555 6666665531 1 34556642 333 48999999999999974332 33 33444346766641
Q ss_pred -------------CCHHHHHHHHHHHHHHhcCCHHHHH
Q 003947 691 -------------YKGDQATGILVDFFEKCKVDPGHWD 715 (784)
Q Consensus 691 -------------~d~e~lAe~I~~~l~~ll~dp~~~~ 715 (784)
-+.++++++|.+++. .++++++
T Consensus 412 ~~~~~~~~~~~~~~~~e~l~~av~~vm~---~~~~~r~ 446 (481)
T PLN02554 412 YWRGDLLAGEMETVTAEEIERGIRCLME---QDSDVRK 446 (481)
T ss_pred cccccccccccCeEcHHHHHHHHHHHhc---CCHHHHH
Confidence 256677777765441 2555444
No 145
>PRK02797 4-alpha-L-fucosyltransferase; Provisional
Probab=96.70 E-value=0.25 Score=53.60 Aligned_cols=169 Identities=11% Similarity=0.014 Sum_probs=114.6
Q ss_pred CCEEEEEec-ccCCCChHHHHHHHHHhHccCCCeEEEEEeCCCCCCcccHHHHHHHHHHHHHHHhcCCCCcEEEccCcCC
Q 003947 548 KPILFTMAR-LDRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYGLIDTYKLNGQFRWISSQMN 626 (784)
Q Consensus 548 k~iIl~vGR-L~~~Kgi~~LieA~~~l~~~~~~v~LvIVG~g~~~~s~d~ee~~~~~~l~~li~~l~L~~~V~flG~~~~ 626 (784)
.++.+-+|+ =|+..++..+++++.+... .++++++.=+-|. -..++++++.+..+++--.++++.+- +
T Consensus 145 ~~~tIlvGNSgd~SN~Hie~L~~l~~~~~--~~v~ii~PlsYp~------gn~~Yi~~V~~~~~~lF~~~~~~~L~---e 213 (322)
T PRK02797 145 GKMTILVGNSGDRSNRHIEALRALHQQFG--DNVKIIVPMGYPA------NNQAYIEEVRQAGLALFGAENFQILT---E 213 (322)
T ss_pred CceEEEEeCCCCCcccHHHHHHHHHHHhC--CCeEEEEECCcCC------CCHHHHHHHHHHHHHhcCcccEEehh---h
Confidence 355566665 4677888888888877643 6788887765542 01367788888888887667888886 5
Q ss_pred cCChhHHHHHHHccccEEEeCC-CCCCCcHHHHHHHHcCCcEEEc-CccccccccccCceEEEECCCCHHHHHHHHHHHH
Q 003947 627 RVRNGELYRYICDTKGAFVQPA-LYEAFGLTVVEAMTCGLPTFAT-CNGGPAEIIVHGKSGFHIDPYKGDQATGILVDFF 704 (784)
Q Consensus 627 ~v~~~el~~~la~aadvfV~PS-~~E~fGltvlEAMA~GlPVIaT-~~GG~~EiI~dg~~G~li~p~d~e~lAe~I~~~l 704 (784)
.++.+|-.++++. +|+.++-- +-+|.|+ +.=.+..|+||+.+ +..-..++.+.|..- +++..+.+ ..+.
T Consensus 214 ~l~f~eYl~lL~~-~Dl~~f~~~RQQgiGn-l~lLi~~G~~v~l~r~n~fwqdl~e~gv~V-lf~~d~L~---~~~v--- 284 (322)
T PRK02797 214 KLPFDDYLALLRQ-CDLGYFIFARQQGIGT-LCLLIQLGKPVVLSRDNPFWQDLTEQGLPV-LFTGDDLD---EDIV--- 284 (322)
T ss_pred hCCHHHHHHHHHh-CCEEEEeechhhHHhH-HHHHHHCCCcEEEecCCchHHHHHhCCCeE-EecCCccc---HHHH---
Confidence 8889999999995 99888764 5788885 45579999999998 555566766666443 34433221 1111
Q ss_pred HHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Q 003947 705 EKCKVDPGHWDEISQGGLKRIQEKYTWKIYSERLLNLSGV 744 (784)
Q Consensus 705 ~~ll~dp~~~~~m~~~a~~~v~~~ytw~~~a~~ll~ly~~ 744 (784)
.+..++|...-++.+. |+-+.+.+.+.+++..
T Consensus 285 ------~e~~rql~~~dk~~I~--Ff~pn~~~~W~~~l~~ 316 (322)
T PRK02797 285 ------REAQRQLASVDKNIIA--FFSPNYLQGWRNALAI 316 (322)
T ss_pred ------HHHHHHHHhhCcceee--ecCHhHHHHHHHHHHH
Confidence 0112334455555663 9989999988888764
No 146
>PLN02410 UDP-glucoronosyl/UDP-glucosyl transferase family protein
Probab=96.70 E-value=1.8 Score=50.08 Aligned_cols=93 Identities=13% Similarity=0.160 Sum_probs=55.3
Q ss_pred CcEEEccCcCCcCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcCc----cccccccccC-ceEEEEC-
Q 003947 616 GQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCN----GGPAEIIVHG-KSGFHID- 689 (784)
Q Consensus 616 ~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMA~GlPVIaT~~----GG~~EiI~dg-~~G~li~- 689 (784)
++....+ +++..++... . +.++||.- -|+ ++++||+++|+|+|+... ...+..+.+. ..|+-++
T Consensus 324 ~~g~v~~----w~PQ~~iL~h-~-~v~~fvtH---~G~-nS~~Ea~~~GvP~l~~P~~~DQ~~na~~~~~~~~~G~~~~~ 393 (451)
T PLN02410 324 GRGYIVK----WAPQKEVLSH-P-AVGGFWSH---CGW-NSTLESIGEGVPMICKPFSSDQKVNARYLECVWKIGIQVEG 393 (451)
T ss_pred CCeEEEc----cCCHHHHhCC-C-ccCeeeec---Cch-hHHHHHHHcCCCEEeccccccCHHHHHHHHHHhCeeEEeCC
Confidence 4555555 7777776653 1 24457753 233 489999999999999633 3334444433 4777663
Q ss_pred CCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHH
Q 003947 690 PYKGDQATGILVDFFEKCKVDPGHWDEISQGGLK 723 (784)
Q Consensus 690 p~d~e~lAe~I~~~l~~ll~dp~~~~~m~~~a~~ 723 (784)
.-+.+++++++.++ +.+++ .+++.+++++
T Consensus 394 ~~~~~~v~~av~~l----m~~~~-~~~~r~~a~~ 422 (451)
T PLN02410 394 DLDRGAVERAVKRL----MVEEE-GEEMRKRAIS 422 (451)
T ss_pred cccHHHHHHHHHHH----HcCCc-HHHHHHHHHH
Confidence 23567788777654 45654 3444444443
No 147
>PLN02210 UDP-glucosyl transferase
Probab=96.55 E-value=2.3 Score=49.30 Aligned_cols=133 Identities=11% Similarity=0.118 Sum_probs=69.9
Q ss_pred CCCEEEEEecccCCCChHHHHHHHHHhHccCCCeEEEE-EeCCCCCCcccHHHHHHHHHHHHHHHhcCCCCcEEEccCcC
Q 003947 547 SKPILFTMARLDRVKNLTGLVEWYGKNAKLRELVNLVV-VGGDRRKESKDLEEQAEMKKMYGLIDTYKLNGQFRWISSQM 625 (784)
Q Consensus 547 ~k~iIl~vGRL~~~Kgi~~LieA~~~l~~~~~~v~LvI-VG~g~~~~s~d~ee~~~~~~l~~li~~l~L~~~V~flG~~~ 625 (784)
...+.++.|.+... .-+.+-+++..+... ..+|++ ++.... ..+. +.+.+... .++....+
T Consensus 269 ~svvyvsfGS~~~~-~~~~~~e~a~~l~~~--~~~flw~~~~~~~--~~~~------~~~~~~~~----~~~g~v~~--- 330 (456)
T PLN02210 269 SSVVYISFGSMLES-LENQVETIAKALKNR--GVPFLWVIRPKEK--AQNV------QVLQEMVK----EGQGVVLE--- 330 (456)
T ss_pred CceEEEEecccccC-CHHHHHHHHHHHHhC--CCCEEEEEeCCcc--ccch------hhHHhhcc----CCCeEEEe---
Confidence 45678888887542 334555555555543 335444 332111 0011 11222211 13333344
Q ss_pred CcCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcCccc----ccccccc-CceEEEECC------CCHH
Q 003947 626 NRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCNGG----PAEIIVH-GKSGFHIDP------YKGD 694 (784)
Q Consensus 626 ~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMA~GlPVIaT~~GG----~~EiI~d-g~~G~li~p------~d~e 694 (784)
+++..++... . +.++||.= -|+ ++++||+++|+|+|+-...+ .+..+.+ -..|..++. -+.+
T Consensus 331 -w~PQ~~iL~h-~-~vg~FitH---~G~-nS~~Eai~~GVP~v~~P~~~DQ~~na~~~~~~~g~G~~l~~~~~~~~~~~~ 403 (456)
T PLN02210 331 -WSPQEKILSH-M-AISCFVTH---CGW-NSTIETVVAGVPVVAYPSWTDQPIDARLLVDVFGIGVRMRNDAVDGELKVE 403 (456)
T ss_pred -cCCHHHHhcC-c-CcCeEEee---CCc-ccHHHHHHcCCCEEecccccccHHHHHHHHHHhCeEEEEeccccCCcCCHH
Confidence 6666665542 1 12466653 233 38999999999999964333 3445544 457877742 2567
Q ss_pred HHHHHHHHHH
Q 003947 695 QATGILVDFF 704 (784)
Q Consensus 695 ~lAe~I~~~l 704 (784)
++++++.+++
T Consensus 404 ~l~~av~~~m 413 (456)
T PLN02210 404 EVERCIEAVT 413 (456)
T ss_pred HHHHHHHHHh
Confidence 7777777544
No 148
>PRK14089 ipid-A-disaccharide synthase; Provisional
Probab=96.45 E-value=0.081 Score=58.92 Aligned_cols=91 Identities=15% Similarity=0.053 Sum_probs=57.6
Q ss_pred CCEEEEEeccc--CCCChHHHHHHHHHhHccCCCeEEEEEeCCCCCCcccHHHHHHHHHHHHHHHhcCCCCcEEEccCcC
Q 003947 548 KPILFTMARLD--RVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYGLIDTYKLNGQFRWISSQM 625 (784)
Q Consensus 548 k~iIl~vGRL~--~~Kgi~~LieA~~~l~~~~~~v~LvIVG~g~~~~s~d~ee~~~~~~l~~li~~l~L~~~V~flG~~~ 625 (784)
+.+.+..|.-. -.+.+..+++++.++.+.. ..+++.|.... +.+.+...+. ..+.+++
T Consensus 168 ~~I~llPGSR~~Ei~~llP~~~~aa~~L~~~~--~~~~i~~a~~~------------~~i~~~~~~~---~~~~~~~--- 227 (347)
T PRK14089 168 GTIAFMPGSRKSEIKRLMPIFKELAKKLEGKE--KILVVPSFFKG------------KDLKEIYGDI---SEFEISY--- 227 (347)
T ss_pred CEEEEECCCCHHHHHHHHHHHHHHHHHHhhcC--cEEEEeCCCcH------------HHHHHHHhcC---CCcEEec---
Confidence 34455566432 2366677789998887643 67777765411 2233333322 2344443
Q ss_pred CcCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEc
Q 003947 626 NRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFAT 670 (784)
Q Consensus 626 ~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMA~GlPVIaT 670 (784)
+.+.+++ ++|+.+..| |.+.+|++.+|+|.|..
T Consensus 228 ------~~~~~m~-~aDlal~~S-----GT~TLE~al~g~P~Vv~ 260 (347)
T PRK14089 228 ------DTHKALL-EAEFAFICS-----GTATLEAALIGTPFVLA 260 (347)
T ss_pred ------cHHHHHH-hhhHHHhcC-----cHHHHHHHHhCCCEEEE
Confidence 3466777 499888776 98989999999999985
No 149
>KOG1050 consensus Trehalose-6-phosphate synthase component TPS1 and related subunits [Carbohydrate transport and metabolism]
Probab=96.35 E-value=0.28 Score=59.40 Aligned_cols=302 Identities=14% Similarity=0.118 Sum_probs=169.6
Q ss_pred hhhHHHHHHHHHHHHHHHcCCCceEEEEcCCChhHHHHHHHHh-CCCcEEEEecCCcccCCCCCcchhhhccccccccch
Q 003947 362 WPYLETFTEDVATEIIQELQCKPDLIIGNYSDGNIVASLLAHK-LDVTQCTIAHALELTKYPDSDINWKKLDDKYHFSCQ 440 (784)
Q Consensus 362 ~~yl~~f~~~~~~~i~~~~~~~pDIIh~~~~~~~lva~llar~-~gvp~V~t~H~l~~~k~~~s~~~~~~~~~~y~~~~~ 440 (784)
|.....+.......+.+.++ .-|+|..|.....++..++... ..+++-+-.|+-. +.+.++ +....
T Consensus 120 w~~y~~~n~~f~d~ive~~~-~~d~vwihdyhlmllp~~lr~~~~~~~ig~flhspf----pssEi~--------r~lp~ 186 (732)
T KOG1050|consen 120 WKAYVKVNQAFADKIVEVYE-EGDIVWIHDYHLMLLPQMLRERFNSAKIGFFLHSPF----PSSEIY--------RCLPV 186 (732)
T ss_pred HHHHHHHhHHHHHHHHHhcc-CCCcEEEEcchhhccchhhhcccccceEEEeccCCC----ChHHHH--------Hhccc
Confidence 43333344555566666656 7888888887766655555554 3455545666532 212111 11111
Q ss_pred hhhhHHHhcccCEEEecChHhHhhcccc-----ccccccccccccccceeeecCCCCCCCceEEecCCCCCCCCCCCcHH
Q 003947 441 FTADLFAMNRTDFIITSTFQEIAGSKDT-----VGQYESHTAFSLPGLYRVVNGIDAFDPKFNIVSPGADMTIYFPYMEE 515 (784)
Q Consensus 441 ~~~e~~a~~~AD~IIt~S~~~~~~~~~~-----vgqYe~~~~f~~p~l~~~~~gi~~f~~k~~VIpnGvD~~~f~p~~~~ 515 (784)
...-+..+..+|.|=..+++.+...... .-.+.+ .|...+ ....|. ...+.++|-|+|...|......
T Consensus 187 r~eIl~gll~~~~i~f~t~d~arhFls~c~R~l~~~~~s--~~~~~~--v~~rgr---~~~v~~~pigid~~r~v~~~~~ 259 (732)
T KOG1050|consen 187 RKEILRGLLYDDLLGFHTDDYARHFLSTCSRLLGLEVAS--KFPTAG--VSGRGR---DVSVKALPIGIDVQRFVKLLEL 259 (732)
T ss_pred HHHHHHhhhccCccccccccHHHHHHHHHHHHHHhhhhc--cCCcce--EEeccc---eeeeeecccccchHHhhccccc
Confidence 1112234566666655444332210000 000000 000000 001111 2346677888888776543221
Q ss_pred HHhhhcchhhhHHhhcCchhhhhhhccccCCCCCEEEEEecccCCCChHHHHHHHHHhHccC----CCeEEEEEeCCCCC
Q 003947 516 KRRLKHFHSEIEELLYSPVENKEHLCVLKDSSKPILFTMARLDRVKNLTGLVEWYGKNAKLR----ELVNLVVVGGDRRK 591 (784)
Q Consensus 516 ~~rl~~~~~~~~~~l~~~~~~~~~~gll~~~~k~iIl~vGRL~~~Kgi~~LieA~~~l~~~~----~~v~LvIVG~g~~~ 591 (784)
..... | ...+.-. ..++.+|+-+-|++..||+..=+.++.++.+.+ +.+.++.+......
T Consensus 260 ~~~~~--~-------------~~ei~~~-~~g~klilgvD~~d~~kg~~~Kl~a~e~~L~~~pe~~~kVvliqi~~~~~~ 323 (732)
T KOG1050|consen 260 PYVGS--K-------------GMEIKEP-FKGKKLILGVDRLDSIKGIQLKLLAFEQFLEEYPEWIDKVVLIQIENPKRT 323 (732)
T ss_pred hhHHH--H-------------HHHHhhh-ccCCceEecccccccccCchHHHHHHHHHHHhChhhhceEEEEEEecCCcc
Confidence 11000 0 0011111 247788999999999999988888888776554 45677777665442
Q ss_pred CcccH-HHHHHHHHHHHHHHh-cCC--CCcEEEccCcCCcCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcC---
Q 003947 592 ESKDL-EEQAEMKKMYGLIDT-YKL--NGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCG--- 664 (784)
Q Consensus 592 ~s~d~-ee~~~~~~l~~li~~-l~L--~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMA~G--- 664 (784)
+.++- +..........-+++ .+- ...|+++- ..++..++.++++ .+|++...++-+|..++.+|+.+|.
T Consensus 324 ~~~~v~~~k~~v~~~v~rIn~~f~~~~~~pV~~~~---~~~~~~~l~a~~~-Vaev~~v~s~rdGmnl~~~e~i~~~~~~ 399 (732)
T KOG1050|consen 324 DGKEVEELKFCVSVHVRRINEKFGSASYQPVHSLL---KDLPFLELLALYK-VAEVCPVTSWRDGMNLVFLEYILCQENK 399 (732)
T ss_pred cchHHHHHHHHhHhhhhhhhhccCCcccceEEEee---ccCCHHHHhhhHH-hhhheeecccccccchhhhHHHHhhccc
Confidence 11111 112222222222221 221 12344332 3677889999998 5999999999999999999999985
Q ss_pred -CcEEEcCccccccccccCceEEEECCCCHHHHHHHHHHHHH
Q 003947 665 -LPTFATCNGGPAEIIVHGKSGFHIDPYKGDQATGILVDFFE 705 (784)
Q Consensus 665 -lPVIaT~~GG~~EiI~dg~~G~li~p~d~e~lAe~I~~~l~ 705 (784)
.+.|.+.+-|..+..+++ ..+++|.|.++++..|..++.
T Consensus 400 ~~~lVlsef~G~~~tl~d~--aivvnpw~~~~~~~~i~~al~ 439 (732)
T KOG1050|consen 400 KSVLVLSEFIGDDTTLEDA--AIVVNPWDGDEFAILISKALT 439 (732)
T ss_pred CCceEEeeecccccccccc--CEEECCcchHHHHHHHHHHhh
Confidence 778889999998887664 678999999999999987653
No 150
>PF00343 Phosphorylase: Carbohydrate phosphorylase; InterPro: IPR000811 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 35 GT35 from CAZY comprises enzymes with only one known activity; glycogen and starch phosphorylase (2.4.1.1 from EC). The main role of glycogen phosphorylase (GPase) is to provide phosphorylated glucose molecules (G-1-P) []. GPase is a highly regulated allosteric enzyme. The net effect of the regulatory site allows the enzyme to operate at a variety of rates; the enzyme is not simply regulated as "on" or "off", but rather it can be thought of being set to operate at an ideal rate based on changing conditions at in the cell. The most important allosteric effector is the phosphate molecule covalently attached to Ser14. This switches GPase from the b (inactive) state to the a (active) state. Upon phosphorylation, GPase attains about 80% of its Vmax. When the enzyme is not phosphorylated, GPase activity is practically non-existent at low AMP levels. There is some apparent controversy as to the structure of GPase. All sources agree that the enzyme is multimeric, but there is apparent controversy as to the enzyme being a tetramer or a dimer. Apparently, GPase (in the a form) forms tetramers in the crystal form. The consensus seems to be that `regardless of the a or b form, GPase functions as a dimer in vivo []. The GPase monomer is best described as consisting of two domains, an N-terminal domain and a C-terminal domain []. The C-terminal domain is often referred to as the catalytic domain. It consists of a beta-sheet core surrounded by layers of helical segments []. The vitamin cofactor pyridoxal phosphate (PLP) is covalently attached to the amino acid backbone. The N-terminal domain also consists of a central beta-sheet core and is surrounded by layers of helical segments. The N-terminal domain contains different allosteric effector sites to regulate the enzyme. Bacterial phosphorylases follow the same catalytic mechanisms as their plant and animal counterparts, but differ considerably in terms of their substrate specificity and regulation. The catalytic domains are highly conserved while the regulatory sites are only poorly conserved. For maltodextrin phosphorylase from Escherichia coli the physiological role of the enzyme in the utilisation of maltidextrins is known in detail; that of all the other bacterial phosphorylases is still unclear. Roles in regulatuon of endogenous glycogen metabolism in periods of starvation, and sporulation, stress response or quick adaptation to changing environments are possible [].; GO: 0004645 phosphorylase activity, 0005975 carbohydrate metabolic process; PDB: 1YGP_B 2AW3_B 2AV6_B 1AHP_B 1QM5_A 1L5W_A 2ECP_A 2ASV_A 1L5V_B 1E4O_B ....
Probab=96.32 E-value=0.23 Score=59.52 Aligned_cols=144 Identities=14% Similarity=0.116 Sum_probs=92.1
Q ss_pred hhccccCCCCCEEEEEecccCCCChHHH----HHHHHHhHcc----CCCeEEEEEeCCCCCCcccHHHHHHHHHHHHHHH
Q 003947 539 HLCVLKDSSKPILFTMARLDRVKNLTGL----VEWYGKNAKL----RELVNLVVVGGDRRKESKDLEEQAEMKKMYGLID 610 (784)
Q Consensus 539 ~~gll~~~~k~iIl~vGRL~~~Kgi~~L----ieA~~~l~~~----~~~v~LvIVG~g~~~~s~d~ee~~~~~~l~~li~ 610 (784)
+.|+.-+++...++++-|+..+|..... ++-+.++++. ...+.+++.|...+. |...++.++.+.++++
T Consensus 435 ~~~~~ldp~slfdv~~rR~heYKRq~LniL~ii~~y~rik~~p~~~~~Pv~~IFaGKAhP~---d~~gK~iIk~I~~va~ 511 (713)
T PF00343_consen 435 RTGVELDPDSLFDVQARRFHEYKRQLLNILHIIDRYNRIKNNPNKKIRPVQFIFAGKAHPG---DYMGKEIIKLINNVAE 511 (713)
T ss_dssp HHSS---TTSEEEEEES-SCCCCTHHHHHHHHHHHHHHHHHSTTSCCS-EEEEEE----TT----HHHHHHHHHHHHHHH
T ss_pred HhCCCCCcchhhhhhhhhcccccccCcccccHHHHHHHHHhcccCCCCCeEEEEeccCCCC---cHHHHHHHHHHHHHHH
Confidence 3455447788888999999999998883 3555566543 124778888876553 4455556666666554
Q ss_pred h----cCCCC--cEEEccCcCCcCChhHHHHHHHccccEEEeCCC--CCCCcHHHHHHHHcCCcEEEcCcccccccccc-
Q 003947 611 T----YKLNG--QFRWISSQMNRVRNGELYRYICDTKGAFVQPAL--YEAFGLTVVEAMTCGLPTFATCNGGPAEIIVH- 681 (784)
Q Consensus 611 ~----l~L~~--~V~flG~~~~~v~~~el~~~la~aadvfV~PS~--~E~fGltvlEAMA~GlPVIaT~~GG~~EiI~d- 681 (784)
. ..+.+ +|.|+. ..+. .+.+.+-.++||-.+.|. .|+.|..-+=||.-|.+.++|-.|...|+.+.
T Consensus 512 ~in~Dp~v~~~lkVvFle----nYdv-slA~~lipg~DVwln~p~~p~EASGTSgMK~~~NGaL~lstlDG~niEi~e~v 586 (713)
T PF00343_consen 512 VINNDPEVGDRLKVVFLE----NYDV-SLAEKLIPGVDVWLNIPTRPKEASGTSGMKAAMNGALNLSTLDGWNIEIAEAV 586 (713)
T ss_dssp HHCT-TTTCCGEEEEEET----T-SH-HHHHHHGGG-SEEEE---TTSSSS-SHHHHHHHTT-EEEEESSTCHHHHHHHH
T ss_pred HHhcChhhccceeEEeec----CCcH-HHHHHHhhhhhhhhhCCCCCccccCCCcchhhcCCCeEEecccchhHHHHHhc
Confidence 3 33445 789986 3444 455555557999999886 89999999999999999999999999999864
Q ss_pred -CceEEEECC
Q 003947 682 -GKSGFHIDP 690 (784)
Q Consensus 682 -g~~G~li~p 690 (784)
.+++|++-.
T Consensus 587 G~eN~fiFG~ 596 (713)
T PF00343_consen 587 GEENIFIFGL 596 (713)
T ss_dssp -GGGSEEES-
T ss_pred CCCcEEEcCC
Confidence 457888853
No 151
>PLN02173 UDP-glucosyl transferase family protein
Probab=96.24 E-value=3.3 Score=47.88 Aligned_cols=94 Identities=14% Similarity=0.112 Sum_probs=55.6
Q ss_pred CCcEEEccCcCCcCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcC----ccccccccccC-ceEEEEC
Q 003947 615 NGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATC----NGGPAEIIVHG-KSGFHID 689 (784)
Q Consensus 615 ~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMA~GlPVIaT~----~GG~~EiI~dg-~~G~li~ 689 (784)
.+++.+.+ +++..++... . +.++||.- -| .++++||+++|+|+|+-. ..-....+.+. ..|+-+.
T Consensus 316 ~~~~~i~~----W~PQ~~iL~H-~-~v~~FvtH---cG-wnS~~Eai~~GVP~l~~P~~~DQ~~Na~~v~~~~g~Gv~v~ 385 (449)
T PLN02173 316 KDKSLVLK----WSPQLQVLSN-K-AIGCFMTH---CG-WNSTMEGLSLGVPMVAMPQWTDQPMNAKYIQDVWKVGVRVK 385 (449)
T ss_pred CCceEEeC----CCCHHHHhCC-C-ccceEEec---Cc-cchHHHHHHcCCCEEecCchhcchHHHHHHHHHhCceEEEe
Confidence 35677777 6776665552 1 13466643 12 468999999999999963 33344555542 4666654
Q ss_pred CC------CHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHH
Q 003947 690 PY------KGDQATGILVDFFEKCKVDPGHWDEISQGGLK 723 (784)
Q Consensus 690 p~------d~e~lAe~I~~~l~~ll~dp~~~~~m~~~a~~ 723 (784)
.. +.+++++++.+++ .+++ .++|.+++.+
T Consensus 386 ~~~~~~~~~~e~v~~av~~vm----~~~~-~~~~r~~a~~ 420 (449)
T PLN02173 386 AEKESGIAKREEIEFSIKEVM----EGEK-SKEMKENAGK 420 (449)
T ss_pred ecccCCcccHHHHHHHHHHHh----cCCh-HHHHHHHHHH
Confidence 21 4677888887544 4543 2445444444
No 152
>PLN03007 UDP-glucosyltransferase family protein
Probab=96.12 E-value=4 Score=47.64 Aligned_cols=45 Identities=16% Similarity=0.135 Sum_probs=29.8
Q ss_pred CcEEEccCcCCcCChhHHHHHHHccc--cEEEeCCCCCCCcHHHHHHHHcCCcEEEcCc
Q 003947 616 GQFRWISSQMNRVRNGELYRYICDTK--GAFVQPALYEAFGLTVVEAMTCGLPTFATCN 672 (784)
Q Consensus 616 ~~V~flG~~~~~v~~~el~~~la~aa--dvfV~PS~~E~fGltvlEAMA~GlPVIaT~~ 672 (784)
.+++..+ +++..++.. .. ++||.= -| -++++||+++|+|+|+...
T Consensus 345 ~g~~v~~----w~PQ~~iL~----h~~v~~fvtH---~G-~nS~~Eal~~GVP~v~~P~ 391 (482)
T PLN03007 345 KGLIIRG----WAPQVLILD----HQATGGFVTH---CG-WNSLLEGVAAGLPMVTWPV 391 (482)
T ss_pred CCEEEec----CCCHHHHhc----cCccceeeec---Cc-chHHHHHHHcCCCeeeccc
Confidence 4566666 666655554 24 346643 23 3589999999999999744
No 153
>COG3980 spsG Spore coat polysaccharide biosynthesis protein, predicted glycosyltransferase [Cell envelope biogenesis, outer membrane]
Probab=96.04 E-value=0.23 Score=52.92 Aligned_cols=139 Identities=19% Similarity=0.238 Sum_probs=78.2
Q ss_pred CCCEEEEEecccCCCChHHHHHHHHHhHccCCCeEEEEEeCCCCCCcccHHHHHHHHHHHHHHHhcCCCCcEEEccCcCC
Q 003947 547 SKPILFTMARLDRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYGLIDTYKLNGQFRWISSQMN 626 (784)
Q Consensus 547 ~k~iIl~vGRL~~~Kgi~~LieA~~~l~~~~~~v~LvIVG~g~~~~s~d~ee~~~~~~l~~li~~l~L~~~V~flG~~~~ 626 (784)
.+-+++++|.=|+ ||++. +.++.+.+. ++++.||-+... ...+.+.+.+ ...+++.++-
T Consensus 158 ~r~ilI~lGGsDp-k~lt~--kvl~~L~~~--~~nl~iV~gs~~---------p~l~~l~k~~---~~~~~i~~~~---- 216 (318)
T COG3980 158 KRDILITLGGSDP-KNLTL--KVLAELEQK--NVNLHIVVGSSN---------PTLKNLRKRA---EKYPNINLYI---- 216 (318)
T ss_pred hheEEEEccCCCh-hhhHH--HHHHHhhcc--CeeEEEEecCCC---------cchhHHHHHH---hhCCCeeeEe----
Confidence 4457888887665 76543 444445442 367666554222 1123344444 3456777764
Q ss_pred cCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCc--EEE--cCcccccccccc----CceEEEECCCCHHHHHH
Q 003947 627 RVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLP--TFA--TCNGGPAEIIVH----GKSGFHIDPYKGDQATG 698 (784)
Q Consensus 627 ~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMA~GlP--VIa--T~~GG~~EiI~d----g~~G~li~p~d~e~lAe 698 (784)
..+++.+++.+ +|+.+... |.|+.||...|+| +++ .+.-..+..... ...|++.+ ..+...
T Consensus 217 --~~~dma~LMke-~d~aI~Aa-----GstlyEa~~lgvP~l~l~~a~NQ~~~a~~f~~lg~~~~l~~~l~---~~~~~~ 285 (318)
T COG3980 217 --DTNDMAELMKE-ADLAISAA-----GSTLYEALLLGVPSLVLPLAENQIATAKEFEALGIIKQLGYHLK---DLAKDY 285 (318)
T ss_pred --cchhHHHHHHh-cchheecc-----chHHHHHHHhcCCceEEeeeccHHHHHHHHHhcCchhhccCCCc---hHHHHH
Confidence 34578899986 88887654 9999999999999 333 222222222211 12455532 233333
Q ss_pred HHHHHHHHhcCCHHHHHHHHHHH
Q 003947 699 ILVDFFEKCKVDPGHWDEISQGG 721 (784)
Q Consensus 699 ~I~~~l~~ll~dp~~~~~m~~~a 721 (784)
.+. .+.+|+..+..++..+
T Consensus 286 ~~~----~i~~d~~~rk~l~~~~ 304 (318)
T COG3980 286 EIL----QIQKDYARRKNLSFGS 304 (318)
T ss_pred HHH----HhhhCHHHhhhhhhcc
Confidence 333 4557888777665543
No 154
>PF07429 Glyco_transf_56: 4-alpha-L-fucosyltransferase glycosyl transferase group 56; InterPro: IPR009993 This family contains the bacterial enzyme 4-alpha-L-fucosyltransferase (Fuc4NAc transferase) (approximately 360 residues long). This catalyses the synthesis of Fuc4NAc-ManNAcA-GlcNAc-PP-Und (lipid III) as part of the biosynthetic pathway of enterobacterial common antigen (ECA), a polysaccharide comprised of the trisaccharide repeat unit Fuc4NAc-ManNAcA-GlcNAc [].; GO: 0008417 fucosyltransferase activity, 0009246 enterobacterial common antigen biosynthetic process, 0009276 Gram-negative-bacterium-type cell wall
Probab=95.97 E-value=0.41 Score=52.62 Aligned_cols=123 Identities=11% Similarity=0.060 Sum_probs=87.1
Q ss_pred CCCEEEEEec-ccCCCChHHHHHHHHHhHccCCCeEEEEEeCCCCCCcccHHHHHHHHHHHHHHHhcCCCCcEEEccCcC
Q 003947 547 SKPILFTMAR-LDRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYGLIDTYKLNGQFRWISSQM 625 (784)
Q Consensus 547 ~k~iIl~vGR-L~~~Kgi~~LieA~~~l~~~~~~v~LvIVG~g~~~~s~d~ee~~~~~~l~~li~~l~L~~~V~flG~~~ 625 (784)
+++.-+.+|+ -++..+.-.+++++.+.. ..++++++-=+-+. ...++++++.+..+++--.+++..+-
T Consensus 183 ~~~ltILvGNSgd~sNnHieaL~~L~~~~--~~~~kIivPLsYg~------~n~~Yi~~V~~~~~~lF~~~~~~iL~--- 251 (360)
T PF07429_consen 183 KGKLTILVGNSGDPSNNHIEALEALKQQF--GDDVKIIVPLSYGA------NNQAYIQQVIQAGKELFGAENFQILT--- 251 (360)
T ss_pred CCceEEEEcCCCCCCccHHHHHHHHHHhc--CCCeEEEEECCCCC------chHHHHHHHHHHHHHhcCccceeEhh---
Confidence 3455555665 567788888888777633 35677766544332 12367788888888876667888775
Q ss_pred CcCChhHHHHHHHccccEEEeCCC-CCCCcHHHHHHHHcCCcEEEcCcccc-ccccccC
Q 003947 626 NRVRNGELYRYICDTKGAFVQPAL-YEAFGLTVVEAMTCGLPTFATCNGGP-AEIIVHG 682 (784)
Q Consensus 626 ~~v~~~el~~~la~aadvfV~PS~-~E~fGltvlEAMA~GlPVIaT~~GG~-~EiI~dg 682 (784)
+.++.+|-.++++. +|+.++... -.|.| ++.=.+.+|+||+.+...-. .++.+.+
T Consensus 252 e~mpf~eYl~lL~~-cDl~if~~~RQQgiG-nI~lLl~~G~~v~L~~~np~~~~l~~~~ 308 (360)
T PF07429_consen 252 EFMPFDEYLALLSR-CDLGIFNHNRQQGIG-NICLLLQLGKKVFLSRDNPFWQDLKEQG 308 (360)
T ss_pred hhCCHHHHHHHHHh-CCEEEEeechhhhHh-HHHHHHHcCCeEEEecCChHHHHHHhCC
Confidence 48889999999996 999999864 78888 45568999999999865555 4444444
No 155
>PLN02555 limonoid glucosyltransferase
Probab=95.87 E-value=5.1 Score=46.78 Aligned_cols=95 Identities=17% Similarity=0.174 Sum_probs=56.0
Q ss_pred CCcEEEccCcCCcCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcCcc----ccccccccC-ceEEEEC
Q 003947 615 NGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCNG----GPAEIIVHG-KSGFHID 689 (784)
Q Consensus 615 ~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMA~GlPVIaT~~G----G~~EiI~dg-~~G~li~ 689 (784)
.+++...+ +++..++... . +.++||.- -| -++++||+.+|+|+|+...- .....+.+. ..|+-+.
T Consensus 336 ~~~g~v~~----W~PQ~~iL~H-~-~v~~FvtH---~G-~nS~~Eai~~GVP~l~~P~~~DQ~~Na~~~~~~~gvGv~l~ 405 (480)
T PLN02555 336 GDKGKIVQ----WCPQEKVLAH-P-SVACFVTH---CG-WNSTMEALSSGVPVVCFPQWGDQVTDAVYLVDVFKTGVRLC 405 (480)
T ss_pred CCceEEEe----cCCHHHHhCC-C-ccCeEEec---CC-cchHHHHHHcCCCEEeCCCccccHHHHHHHHHHhCceEEcc
Confidence 45566555 6666666542 2 35667753 23 34899999999999996333 334444443 5677662
Q ss_pred -----C--CCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHH
Q 003947 690 -----P--YKGDQATGILVDFFEKCKVDPGHWDEISQGGLKR 724 (784)
Q Consensus 690 -----p--~d~e~lAe~I~~~l~~ll~dp~~~~~m~~~a~~~ 724 (784)
. -+.+++++++.+++ .+++ .++|.++|++.
T Consensus 406 ~~~~~~~~v~~~~v~~~v~~vm----~~~~-g~~~r~ra~~l 442 (480)
T PLN02555 406 RGEAENKLITREEVAECLLEAT----VGEK-AAELKQNALKW 442 (480)
T ss_pred CCccccCcCcHHHHHHHHHHHh----cCch-HHHHHHHHHHH
Confidence 1 14677777777554 4432 34555555544
No 156
>PF08288 PIGA: PIGA (GPI anchor biosynthesis); InterPro: IPR013234 This domain is found on phosphatidylinositol N-acetylglucosaminyltransferase proteins. These proteins are involved in GPI anchor biosynthesis and are associated with the disease paroxysmal nocturnal haemoglobinuria [].; GO: 0006506 GPI anchor biosynthetic process
Probab=95.77 E-value=0.053 Score=47.71 Aligned_cols=72 Identities=17% Similarity=0.097 Sum_probs=49.1
Q ss_pred cCCeEEEEccCCCCcccccccccccCChhhHHHHHHHHHHHHHHHcCCCceEEEEcCCCh--hHHHHHHHHhCCCcEEEE
Q 003947 335 TKYSDILRVPFRTEEGIVRKWISRFEVWPYLETFTEDVATEIIQELQCKPDLIIGNYSDG--NIVASLLAHKLDVTQCTI 412 (784)
Q Consensus 335 ~~~v~IlrvP~~~~~~~~~~~isr~~l~~yl~~f~~~~~~~i~~~~~~~pDIIh~~~~~~--~lva~llar~~gvp~V~t 412 (784)
+.|.+++.+|+..-- +....|.+-....-+...+. +++.||||+|...+ ..-+.+-|+.+|++.|+|
T Consensus 13 tngLKVYYlP~~~~~--------~~~t~Pt~~~~~pl~R~Ili---rE~I~IVHgH~a~S~l~hE~i~hA~~mGlktVfT 81 (90)
T PF08288_consen 13 TNGLKVYYLPLKVFY--------NQCTLPTLFGSFPLLRNILI---RERIDIVHGHQAFSTLCHEAILHARTMGLKTVFT 81 (90)
T ss_pred CCCeEEEeecchhhh--------cCcchHHHHHhhHHHHHHHH---HcCeeEEEeehhhhHHHHHHHHHHHhCCCcEEee
Confidence 347899999986531 23334433333222333333 45899999999876 447888899999999999
Q ss_pred ecCCc
Q 003947 413 AHALE 417 (784)
Q Consensus 413 ~H~l~ 417 (784)
-|++.
T Consensus 82 DHSLf 86 (90)
T PF08288_consen 82 DHSLF 86 (90)
T ss_pred ccccc
Confidence 99974
No 157
>PLN02670 transferase, transferring glycosyl groups
Probab=95.58 E-value=6.4 Score=45.86 Aligned_cols=107 Identities=15% Similarity=0.080 Sum_probs=60.8
Q ss_pred cCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcCc----cccccccccCceEEEECCC------CHHHH
Q 003947 627 RVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCN----GGPAEIIVHGKSGFHIDPY------KGDQA 696 (784)
Q Consensus 627 ~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMA~GlPVIaT~~----GG~~EiI~dg~~G~li~p~------d~e~l 696 (784)
+++..++... . +.++||.= -| -++++||+++|+|+|+... ......+.+-..|..++.. +.+++
T Consensus 346 W~PQ~~IL~H-~-~v~~FvtH---cG-wnS~~Eai~~GVP~l~~P~~~DQ~~Na~~v~~~g~Gv~l~~~~~~~~~~~e~i 419 (472)
T PLN02670 346 WVPQVKILSH-E-SVGGFLTH---CG-WNSVVEGLGFGRVLILFPVLNEQGLNTRLLHGKKLGLEVPRDERDGSFTSDSV 419 (472)
T ss_pred cCCHHHHhcC-c-ccceeeec---CC-cchHHHHHHcCCCEEeCcchhccHHHHHHHHHcCeeEEeeccccCCcCcHHHH
Confidence 5566565542 1 23346642 22 3589999999999999733 3344455555678877532 46777
Q ss_pred HHHHHHHHHHhcCCH---HHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Q 003947 697 TGILVDFFEKCKVDP---GHWDEISQGGLKRIQEKYTWKIYSERLLNLSGV 744 (784)
Q Consensus 697 Ae~I~~~l~~ll~dp---~~~~~m~~~a~~~v~~~ytw~~~a~~ll~ly~~ 744 (784)
++++.++ +.++ +++++ .++-++.+.+.=+-..+++.+.+....
T Consensus 420 ~~av~~v----m~~~~g~~~r~~-a~~l~~~~~~~~~~~~~~~~~~~~l~~ 465 (472)
T PLN02670 420 AESVRLA----MVDDAGEEIRDK-AKEMRNLFGDMDRNNRYVDELVHYLRE 465 (472)
T ss_pred HHHHHHH----hcCcchHHHHHH-HHHHHHHHhCcchhHHHHHHHHHHHHH
Confidence 7777654 4454 23322 222333344555566666666665543
No 158
>COG1817 Uncharacterized protein conserved in archaea [Function unknown]
Probab=95.40 E-value=1.6 Score=47.41 Aligned_cols=48 Identities=19% Similarity=0.200 Sum_probs=33.4
Q ss_pred CCcHHHHHHHHcCCcEEEcCcc---ccccccccCceEEEECCCCHHHHHHHHH
Q 003947 652 AFGLTVVEAMTCGLPTFATCNG---GPAEIIVHGKSGFHIDPYKGDQATGILV 701 (784)
Q Consensus 652 ~fGltvlEAMA~GlPVIaT~~G---G~~EiI~dg~~G~li~p~d~e~lAe~I~ 701 (784)
+-|.-.-||...|+|.|.+.-| +..+...+ .|.++..+|+.+..+...
T Consensus 259 ~ggTMarEaAlLGtpaIs~~pGkll~vdk~lie--~G~~~~s~~~~~~~~~a~ 309 (346)
T COG1817 259 AGGTMAREAALLGTPAISCYPGKLLAVDKYLIE--KGLLYHSTDEIAIVEYAV 309 (346)
T ss_pred CCchHHHHHHHhCCceEEecCCccccccHHHHh--cCceeecCCHHHHHHHHH
Confidence 3466678999999999988644 33444433 588888788876555554
No 159
>PF06258 Mito_fiss_Elm1: Mitochondrial fission ELM1; InterPro: IPR009367 This family consists of several hypothetical eukaryotic and prokaryotic proteins. The function of this family is unknown.
Probab=95.35 E-value=1.5 Score=48.23 Aligned_cols=109 Identities=16% Similarity=0.126 Sum_probs=65.0
Q ss_pred CCCCEEEEEecccCCC--ChH---HHHHHHHHhHccCCCeEEEEEeCCCCCCcccHHHHHHHHHHHHHHHhcCCCCcE-E
Q 003947 546 SSKPILFTMARLDRVK--NLT---GLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYGLIDTYKLNGQF-R 619 (784)
Q Consensus 546 ~~k~iIl~vGRL~~~K--gi~---~LieA~~~l~~~~~~v~LvIVG~g~~~~s~d~ee~~~~~~l~~li~~l~L~~~V-~ 619 (784)
+.+.+.+.+|.=.+.- +-+ .+++.+..+.+... ..+.|..+.... + +..+.+.+.. +-.+.+ .
T Consensus 145 ~~p~~avLIGG~s~~~~~~~~~~~~l~~~l~~~~~~~~-~~~~vttSRRTp-----~--~~~~~L~~~~---~~~~~~~~ 213 (311)
T PF06258_consen 145 PRPRVAVLIGGDSKHYRWDEEDAERLLDQLAALAAAYG-GSLLVTTSRRTP-----P--EAEAALRELL---KDNPGVYI 213 (311)
T ss_pred CCCeEEEEECcCCCCcccCHHHHHHHHHHHHHHHHhCC-CeEEEEcCCCCc-----H--HHHHHHHHhh---cCCCceEE
Confidence 4455667788643322 222 56666666665544 788888876431 1 2223333333 234566 5
Q ss_pred EccCcCCcCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcCccc
Q 003947 620 WISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCNGG 674 (784)
Q Consensus 620 flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMA~GlPVIaT~~GG 674 (784)
|-+ . +..-+..+++. +|.++++... -.-+-||.++|+||..-...+
T Consensus 214 ~~~--~---~~nPy~~~La~-ad~i~VT~DS---vSMvsEA~~tG~pV~v~~l~~ 259 (311)
T PF06258_consen 214 WDG--T---GENPYLGFLAA-ADAIVVTEDS---VSMVSEAAATGKPVYVLPLPG 259 (311)
T ss_pred ecC--C---CCCcHHHHHHh-CCEEEEcCcc---HHHHHHHHHcCCCEEEecCCC
Confidence 532 2 22336678884 9999988542 224789999999999987766
No 160
>COG4671 Predicted glycosyl transferase [General function prediction only]
Probab=94.96 E-value=5.1 Score=44.32 Aligned_cols=106 Identities=16% Similarity=0.153 Sum_probs=62.2
Q ss_pred CCCEEEEEecccCCCChHHHHH---HHHHhHccCCCeEEEEEeCCCCCCcccHHHHHHHHHHHHHHHhcCCCCcEEEccC
Q 003947 547 SKPILFTMARLDRVKNLTGLVE---WYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYGLIDTYKLNGQFRWISS 623 (784)
Q Consensus 547 ~k~iIl~vGRL~~~Kgi~~Lie---A~~~l~~~~~~v~LvIVG~g~~~~s~d~ee~~~~~~l~~li~~l~L~~~V~flG~ 623 (784)
+..+++++|. -.-|-+.+-. |+..+....+ .-++|.|...+. ++.+++ .....-.++|..+-+
T Consensus 219 ~~~Ilvs~GG--G~dG~eLi~~~l~A~~~l~~l~~-~~~ivtGP~MP~--------~~r~~l---~~~A~~~p~i~I~~f 284 (400)
T COG4671 219 GFDILVSVGG--GADGAELIETALAAAQLLAGLNH-KWLIVTGPFMPE--------AQRQKL---LASAPKRPHISIFEF 284 (400)
T ss_pred cceEEEecCC--ChhhHHHHHHHHHHhhhCCCCCc-ceEEEeCCCCCH--------HHHHHH---HHhcccCCCeEEEEh
Confidence 4567788874 3344433333 3333333322 236666766541 233333 333344567877765
Q ss_pred cCCcCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcCcccccc
Q 003947 624 QMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCNGGPAE 677 (784)
Q Consensus 624 ~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMA~GlPVIaT~~GG~~E 677 (784)
.. ++..+++. |+..|.=+ |+ +|+-|-++.|||-+.-..+.+.|
T Consensus 285 ~~------~~~~ll~g-A~~vVSm~---GY-NTvCeILs~~k~aLivPr~~p~e 327 (400)
T COG4671 285 RN------DFESLLAG-ARLVVSMG---GY-NTVCEILSFGKPALIVPRAAPRE 327 (400)
T ss_pred hh------hHHHHHHh-hheeeecc---cc-hhhhHHHhCCCceEEeccCCCcH
Confidence 44 67888885 88888653 22 58899999999998875555444
No 161
>PF11440 AGT: DNA alpha-glucosyltransferase; InterPro: IPR016223 The T4 bacteriophage of E.coli protects its DNA via two glycosyltransferases which glucosylate 5-hydroxymethyl cytosines (5-HMC) using UDP-glucose. These two proteins are the retaining alpha-glucosyltransferase (AGT) and the inverting beta-glucosyltransferase (BGT). The proteins in this family are AGT. AGT adopts the GT-B fold and binds both the sugar donor and acceptor to the C-terminal domain. There is evidence for a role of AGT in the base-flipping mechanism and for its specific recognition of the acceptor base [].; PDB: 1YA6_B 1Y8Z_B 1Y6F_B 1XV5_A 1Y6G_B.
Probab=94.73 E-value=1.5 Score=46.78 Aligned_cols=138 Identities=17% Similarity=0.078 Sum_probs=77.1
Q ss_pred EEEecccCCCChHHHHHHHHHhHccCCCeEEEEEeCCCCCCcccHHHHHHHHHHHH----------HHHhcCC--CCcEE
Q 003947 552 FTMARLDRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYG----------LIDTYKL--NGQFR 619 (784)
Q Consensus 552 l~vGRL~~~Kgi~~LieA~~~l~~~~~~v~LvIVG~g~~~~s~d~ee~~~~~~l~~----------li~~l~L--~~~V~ 619 (784)
.|+||....||...+++.-++..+. +...-++-|-... + +-+.-... .+.+..+ .+-+.
T Consensus 187 ~yigR~Tt~kG~~~mfD~h~~~lK~-~~~~t~~~GierS-----~---A~~~i~d~~~~~~y~~~~~~~~~~~~pN~~~~ 257 (355)
T PF11440_consen 187 RYIGRQTTWKGPRRMFDLHEKILKP-AGFKTIMEGIERS-----P---AKISIKDHGIPYEYYPKLDCDEPKPAPNSPVP 257 (355)
T ss_dssp EEE--SSGGG-HHHHHHHHHHTTTT-TT-EEEEE---SS-----T---HHHHHHHTT--EEEE-CTGGGG---SSS--EE
T ss_pred eeeeeeeeecCcHHHhhhHHHhcCC-cchhHHhhhhhcC-----C---ceeeeecCCcccccCccccccCcccCCCCcce
Confidence 7999999999999999988875543 6777777774321 1 11110000 0111112 12366
Q ss_pred EccCcCCcCChhHHHHHHHccccEEEeCCC------CCCCcHHHHHHHHcCC-cEEEcCcccccc-------ccccCceE
Q 003947 620 WISSQMNRVRNGELYRYICDTKGAFVQPAL------YEAFGLTVVEAMTCGL-PTFATCNGGPAE-------IIVHGKSG 685 (784)
Q Consensus 620 flG~~~~~v~~~el~~~la~aadvfV~PS~------~E~fGltvlEAMA~Gl-PVIaT~~GG~~E-------iI~dg~~G 685 (784)
.+| +.-++|....++. ....++-+. -+..-.+-+|..|||. ||+-+..|.... ++.+..+.
T Consensus 258 v~~----~Yi~~E~~~~Mak-s~Fgy~~~k~~~~y~~r~mEYt~iE~~A~GtIPVF~k~~GEN~r~~~D~~~~~~~~~~~ 332 (355)
T PF11440_consen 258 VYG----PYIRSEGLERMAK-SLFGYQLSKLQQKYLQRSMEYTQIELIAVGTIPVFDKSWGENNRFTLDGTRYIDHPYSA 332 (355)
T ss_dssp EES----S--HHHHHHHHHT-EEEEEE-----GGG-SS---HHHHHHHHCTSEEEEEHHHHHHSB-TTTSSBGGSS--S-
T ss_pred ecc----hhhhHHHHHHHhh-ccceeecHHHHHHHHHhhhhhheeeeeeeceeeeeeccccccceeeecCceeeccCcce
Confidence 666 5567788888986 544444332 3557788999999997 888887775544 23334467
Q ss_pred EEECCCCHHHHHHHHHHH
Q 003947 686 FHIDPYKGDQATGILVDF 703 (784)
Q Consensus 686 ~li~p~d~e~lAe~I~~~ 703 (784)
+.+|.+|.++..++|.+.
T Consensus 333 I~~De~dle~T~ekl~E~ 350 (355)
T PF11440_consen 333 IYFDENDLESTVEKLIEV 350 (355)
T ss_dssp EEE-TTSHHHHHHHHHHH
T ss_pred eEeccchHHHHHHHHHHH
Confidence 889999999999998743
No 162
>PLN02992 coniferyl-alcohol glucosyltransferase
Probab=94.65 E-value=12 Score=43.80 Aligned_cols=78 Identities=14% Similarity=0.089 Sum_probs=47.1
Q ss_pred cEEEccCcCCcCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcCcc----cccccc-ccCceEEEECC-
Q 003947 617 QFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCNG----GPAEII-VHGKSGFHIDP- 690 (784)
Q Consensus 617 ~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMA~GlPVIaT~~G----G~~EiI-~dg~~G~li~p- 690 (784)
.+.+.+ +++..++...- +.+.||.- -| -++++||+.+|+|+|+.... .....+ +.-..|..++.
T Consensus 339 g~vv~~----W~PQ~~iL~h~--~vg~FitH---~G-~nS~~Eal~~GVP~l~~P~~~DQ~~na~~~~~~~g~gv~~~~~ 408 (481)
T PLN02992 339 GFVVPS----WAPQAEILAHQ--AVGGFLTH---CG-WSSTLESVVGGVPMIAWPLFAEQNMNAALLSDELGIAVRSDDP 408 (481)
T ss_pred CEEEee----cCCHHHHhCCc--ccCeeEec---Cc-hhHHHHHHHcCCCEEecCccchhHHHHHHHHHHhCeeEEecCC
Confidence 356555 66666655521 12345543 22 35899999999999997433 334454 24446777753
Q ss_pred ---CCHHHHHHHHHHHH
Q 003947 691 ---YKGDQATGILVDFF 704 (784)
Q Consensus 691 ---~d~e~lAe~I~~~l 704 (784)
-+.++++++|.+++
T Consensus 409 ~~~~~~~~l~~av~~vm 425 (481)
T PLN02992 409 KEVISRSKIEALVRKVM 425 (481)
T ss_pred CCcccHHHHHHHHHHHh
Confidence 25677777776544
No 163
>PF04464 Glyphos_transf: CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase ; InterPro: IPR007554 Wall-associated teichoic acids are a heterogeneous class of phosphate-rich polymers that are covalently linked to the cell wall peptidoglycan of Gram-positive bacteria. They consist of a main chain of phosphodiester-linked polyols and/or sugar moieties attached to peptidoglycan via a linkage unit. CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase is responsible for the polymerisation of the main chain of the teichoic acid by sequential transfer of glycerol-phosphate units from CDP-glycerol to the linkage unit lipid [].; GO: 0047355 CDP-glycerol glycerophosphotransferase activity, 0016020 membrane; PDB: 3L7K_B 3L7L_D 3L7I_A 3L7J_D 3L7M_D.
Probab=94.36 E-value=0.51 Score=52.69 Aligned_cols=133 Identities=11% Similarity=0.139 Sum_probs=65.0
Q ss_pred hhhccccCCCCCEEEEEecccCCCCh------HHHH--HHHHHhHccCCCeEEEEEeCCCCCCcccHHHHHHHHHHHHHH
Q 003947 538 EHLCVLKDSSKPILFTMARLDRVKNL------TGLV--EWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYGLI 609 (784)
Q Consensus 538 ~~~gll~~~~k~iIl~vGRL~~~Kgi------~~Li--eA~~~l~~~~~~v~LvIVG~g~~~~s~d~ee~~~~~~l~~li 609 (784)
+.+|+ +.++.+|+|+-........ ...+ +.+. ....+++.+++-..- .+....
T Consensus 184 ~~~~~--~~~~k~ILyaPT~R~~~~~~~~~~~~~~~~~~~l~--~~~~~~~~li~k~Hp---------------~~~~~~ 244 (369)
T PF04464_consen 184 KKLGI--DKDKKVILYAPTWRDNSSNEYFKFFFSDLDFEKLN--FLLKNNYVLIIKPHP---------------NMKKKF 244 (369)
T ss_dssp HHTT----SS-EEEEEE----GGG--GGSS----TT-HHHHH--HHHTTTEEEEE--SH---------------HHHTT-
T ss_pred HHhcc--CCCCcEEEEeeccccccccccccccccccCHHHHH--HHhCCCcEEEEEeCc---------------hhhhch
Confidence 44565 6677899999765432222 1222 2222 223467888776532 111111
Q ss_pred Hh-cCCCCcEEEccCcCCcCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEc--Cc-------ccccccc
Q 003947 610 DT-YKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFAT--CN-------GGPAEII 679 (784)
Q Consensus 610 ~~-l~L~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMA~GlPVIaT--~~-------GG~~EiI 679 (784)
.. ....++|.++. +..+++.++.. +|++|. -++-++.|++.+++|||.. +. |...+ .
T Consensus 245 ~~~~~~~~~i~~~~------~~~~~~~ll~~-aDiLIT-----DySSi~fD~~~l~KPiify~~D~~~Y~~~rg~~~~-~ 311 (369)
T PF04464_consen 245 KDFKEDNSNIIFVS------DNEDIYDLLAA-ADILIT-----DYSSIIFDFLLLNKPIIFYQPDLEEYEKERGFYFD-Y 311 (369)
T ss_dssp ---TT-TTTEEE-T------T-S-HHHHHHT--SEEEE-----SS-THHHHHGGGT--EEEE-TTTTTTTTTSSBSS--T
T ss_pred hhhhccCCcEEECC------CCCCHHHHHHh-cCEEEE-----echhHHHHHHHhCCCEEEEeccHHHHhhccCCCCc-h
Confidence 11 34457788875 12378899985 999995 3566999999999999964 33 22222 2
Q ss_pred ccCceEEEECCCCHHHHHHHHHHHH
Q 003947 680 VHGKSGFHIDPYKGDQATGILVDFF 704 (784)
Q Consensus 680 ~dg~~G~li~p~d~e~lAe~I~~~l 704 (784)
.+...|-.+ .+.+++.++|.+++
T Consensus 312 ~~~~pg~~~--~~~~eL~~~i~~~~ 334 (369)
T PF04464_consen 312 EEDLPGPIV--YNFEELIEAIENII 334 (369)
T ss_dssp TTSSSS-EE--SSHHHHHHHHTTHH
T ss_pred HhhCCCcee--CCHHHHHHHHHhhh
Confidence 223345555 47888888887544
No 164
>COG3660 Predicted nucleoside-diphosphate-sugar epimerase [Cell envelope biogenesis, outer membrane]
Probab=91.18 E-value=13 Score=39.76 Aligned_cols=113 Identities=8% Similarity=0.048 Sum_probs=64.0
Q ss_pred CCCCCEEEEEecccCCCCh--HHHHHHHHHhHcc--CCCeEEEEEeCCCCCCcccHHHHHHHHHHHHHHHh-cCCCCcEE
Q 003947 545 DSSKPILFTMARLDRVKNL--TGLVEWYGKNAKL--RELVNLVVVGGDRRKESKDLEEQAEMKKMYGLIDT-YKLNGQFR 619 (784)
Q Consensus 545 ~~~k~iIl~vGRL~~~Kgi--~~LieA~~~l~~~--~~~v~LvIVG~g~~~~s~d~ee~~~~~~l~~li~~-l~L~~~V~ 619 (784)
.+..++-+++|.-.+.-.. +.+.+....+.+. .....+++--+... -+..+.+++. +.-..-+.
T Consensus 159 ~~rq~vAVlVGg~nk~f~~~~d~a~q~~~~l~k~l~~~g~~~lisfSRRT-----------p~~~~s~l~~~l~s~~~i~ 227 (329)
T COG3660 159 LPRQRVAVLVGGNNKAFVFQEDKAHQFASLLVKILENQGGSFLISFSRRT-----------PDTVKSILKNNLNSSPGIV 227 (329)
T ss_pred CCCceEEEEecCCCCCCccCHHHHHHHHHHHHHHHHhCCceEEEEeecCC-----------cHHHHHHHHhccccCceeE
Confidence 4566777888866554433 2222222222211 13466776665433 1344555554 55455678
Q ss_pred EccCcCCcCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcCcccc
Q 003947 620 WISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCNGGP 675 (784)
Q Consensus 620 flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMA~GlPVIaT~~GG~ 675 (784)
|-+.-++.. -...+++ +||.++.+...= .-.-||.+.|+||++-.-.+.
T Consensus 228 w~~~d~g~N---PY~~~La-~Adyii~TaDSi---nM~sEAasTgkPv~~~~~~~~ 276 (329)
T COG3660 228 WNNEDTGYN---PYIDMLA-AADYIISTADSI---NMCSEAASTGKPVFILEPPNF 276 (329)
T ss_pred eCCCCCCCC---chHHHHh-hcceEEEecchh---hhhHHHhccCCCeEEEecCCc
Confidence 876433322 2455677 599999886522 235799999999998654433
No 165
>PF05159 Capsule_synth: Capsule polysaccharide biosynthesis protein; InterPro: IPR007833 This family includes export proteins involved in capsule polysaccharide biosynthesis, such as KpsS P42218 from SWISSPROT and LipB P57038 from SWISSPROT. Capsule polysaccharide modification protein lipB/A is involved in the phospholipid modification of the capsular polysaccharide and is a strong requirement for its translocation to the cell surface. The capsule of Neisseria meningitidis serogroup B and of other meningococcal serogroups and other Gram-negative bacterial pathogens, are anchored in the outer membrane through a 1,2-diacylglycerol moiety. The lipA and lipB genes are located on the 3' end of the ctr operon. lipA and lipB do not encode proteins responsible for diacylglycerophosphatidic acid substitution of the meningococcal capsule polymer, but they are required for proper translocation and surface expression of the lipidated polymer []. KpsS is an unusual sulphate-modified form of the capsular polysaccharide in Rhizobium loti (Mesorhizobium loti). Many plants, including R. loti, enter into symbiotic relationships with bacteria that allow survival in nutrient-limiting environments. KpsS functions as a fucosyl sulphotransferase in vitro. The kpsS gene product shares no significant amino acid similarity with previously identified sulphotransferases []. Sulphated cell surface polysaccharides are required for optimum nodule formation but limit growth rate and nodule colonisation in M. loti [].; GO: 0000271 polysaccharide biosynthetic process, 0015774 polysaccharide transport
Probab=90.88 E-value=20 Score=38.17 Aligned_cols=103 Identities=17% Similarity=0.220 Sum_probs=62.1
Q ss_pred CCCCCEEEEEecccCC-------CChHHHHHHHHHhHccCCCeEEEEEeCCCCCCcccHHHHHHHHHHHHHHHhc-CCCC
Q 003947 545 DSSKPILFTMARLDRV-------KNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYGLIDTY-KLNG 616 (784)
Q Consensus 545 ~~~k~iIl~vGRL~~~-------Kgi~~LieA~~~l~~~~~~v~LvIVG~g~~~~s~d~ee~~~~~~l~~li~~l-~L~~ 616 (784)
..++++|+++...... .+...+.+.+..+.+..|+++++|-=. |...... + .....+. +. .
T Consensus 114 ~~~~~~vlv~lQ~~~D~~i~~~~~~~~~~~~~l~~~~~~~p~~~lvvK~H-P~~~~~~-------~--~~~~~~~~~~-~ 182 (269)
T PF05159_consen 114 SKNKKYVLVPLQVENDSQIRYHSPSQADFLDMLESFAKENPDAKLVVKPH-PDERGGN-------K--YSYLEELPNL-P 182 (269)
T ss_pred cCCCCEEEEEeeCCcCcchhccCCcHhHHHHHHHHHHHHCCCCEEEEEEC-chhhCCC-------C--hhHhhhhhcC-C
Confidence 5678888888877653 244566777777777677888876543 3210000 0 0222222 33 3
Q ss_pred cEEEccCcCCcCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEc
Q 003947 617 QFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFAT 670 (784)
Q Consensus 617 ~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMA~GlPVIaT 670 (784)
++.++. +...++.++.. +|.++.-+ +.+-+||+.+|+||++-
T Consensus 183 ~~~~~~------~~~~~~~Ll~~-s~~Vvtin-----StvGlEAll~gkpVi~~ 224 (269)
T PF05159_consen 183 NVVIID------DDVNLYELLEQ-SDAVVTIN-----STVGLEALLHGKPVIVF 224 (269)
T ss_pred CeEEEC------CCCCHHHHHHh-CCEEEEEC-----CHHHHHHHHcCCceEEe
Confidence 344442 12356777775 66655433 66899999999999995
No 166
>PF04101 Glyco_tran_28_C: Glycosyltransferase family 28 C-terminal domain; InterPro: IPR007235 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 28 GT28 from CAZY comprises enzymes with a number of known activities; 1,2-diacylglycerol 3-beta-galactosyltransferase (2.4.1.46 from EC); 1,2-diacylglycerol 3-beta-glucosyltransferase (2.4.1.157 from EC); beta-N-acetylglucosamine transferase (2.4.1 from EC). Structural analysis suggests the C-terminal domain contains the UDP-GlcNAc binding site.; GO: 0016758 transferase activity, transferring hexosyl groups, 0030246 carbohydrate binding, 0005975 carbohydrate metabolic process, 0030259 lipid glycosylation; PDB: 2KS6_A 2JZC_A 1NLM_B 1F0K_B.
Probab=90.84 E-value=0.086 Score=51.90 Aligned_cols=91 Identities=13% Similarity=0.170 Sum_probs=55.3
Q ss_pred CcEEEccCcCCcCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcCccc--------cccccccCceEEE
Q 003947 616 GQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCNGG--------PAEIIVHGKSGFH 687 (784)
Q Consensus 616 ~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMA~GlPVIaT~~GG--------~~EiI~dg~~G~l 687 (784)
.+|.++++.+ ++..+++. +|++|.-+ =+.|+.|++++|+|.|.-...+ ....+.+...|..
T Consensus 55 ~~v~~~~~~~------~m~~~m~~-aDlvIs~a----G~~Ti~E~l~~g~P~I~ip~~~~~~~~q~~na~~~~~~g~~~~ 123 (167)
T PF04101_consen 55 PNVKVFGFVD------NMAELMAA-ADLVISHA----GAGTIAEALALGKPAIVIPLPGAADNHQEENAKELAKKGAAIM 123 (167)
T ss_dssp CCCEEECSSS------SHHHHHHH-HSEEEECS-----CHHHHHHHHCT--EEEE--TTT-T-CHHHHHHHHHHCCCCCC
T ss_pred CcEEEEechh------hHHHHHHH-cCEEEeCC----CccHHHHHHHcCCCeeccCCCCcchHHHHHHHHHHHHcCCccc
Confidence 6788888544 47788885 99888743 2479999999999998865555 1222223223444
Q ss_pred ECCC--CHHHHHHHHHHHHHHhcCCHHHHHHHHHHH
Q 003947 688 IDPY--KGDQATGILVDFFEKCKVDPGHWDEISQGG 721 (784)
Q Consensus 688 i~p~--d~e~lAe~I~~~l~~ll~dp~~~~~m~~~a 721 (784)
+... +++.+.++|. .++.++....++++++
T Consensus 124 ~~~~~~~~~~L~~~i~----~l~~~~~~~~~~~~~~ 155 (167)
T PF04101_consen 124 LDESELNPEELAEAIE----ELLSDPEKLKEMAKAA 155 (167)
T ss_dssp SECCC-SCCCHHHHHH----CHCCCHH-SHHHCCCH
T ss_pred cCcccCCHHHHHHHHH----HHHcCcHHHHHHHHHH
Confidence 3322 3456666665 6778888777666554
No 167
>PF00201 UDPGT: UDP-glucoronosyl and UDP-glucosyl transferase; InterPro: IPR002213 UDP glycosyltransferases (UGT) are a superfamily of enzymes that catalyzes the addition of the glycosyl group from a UTP-sugar to a small hydrophobic molecule. This family currently consist of: Mammalian UDP-glucuronosyl transferases (2.4.1.17 from EC) (UDPGT) []. A large family of membrane-bound microsomal enzymes which catalyze the transfer of glucuronic acid to a wide variety of exogenous and endogenous lipophilic substrates. These enzymes are of major importance in the detoxification and subsequent elimination of xenobiotics such as drugs and carcinogens. A large number of putative UDPGT from Caenorhabditis elegans. Mammalian 2-hydroxyacylsphingosine 1-beta-galactosyltransferase [] (2.4.1.45 from EC) (also known as UDP-galactose-ceramide galactosyltransferase). This enzyme catalyzes the transfer of galactose to ceramide, a key enzymatic step in the biosynthesis of galactocerebrosides, which are abundant sphingolipids of the myelin membrane of the central nervous system and peripheral nervous system. Plants flavonol O(3)-glucosyltransferase (2.4.1.91 from EC). An enzyme [] that catalyzes the transfer of glucose from UDP-glucose to a flavanol. This reaction is essential and one of the last steps in anthocyanin pigment biosynthesis. Baculoviruses ecdysteroid UDP-glucosyltransferase (2.4.1 from EC) [] (egt). This enzyme catalyzes the transfer of glucose from UDP-glucose to ectysteroids which are insect molting hormones. The expression of egt in the insect host interferes with the normal insect development by blocking the molting process. Prokaryotic zeaxanthin glucosyltransferase (2.4.1 from EC) (gene crtX), an enzyme involved in carotenoid biosynthesis and that catalyses the glycosylation reaction which converts zeaxanthin to zeaxanthin-beta-diglucoside. Streptomyces macrolide glycosyltransferases (2.4.1 from EC) []. These enzymes specifically inactivates macrolide anitibiotics via 2'-O-glycosylation using UDP-glucose. These enzymes share a conserved domain of about 50 amino acid residues located in their C-terminal section.; GO: 0016758 transferase activity, transferring hexosyl groups, 0008152 metabolic process; PDB: 3HBJ_A 3HBF_A 2PQ6_A 3IA7_B 3RSC_A 3IAA_B 2IYA_A 2IYF_B 2O6L_A 2VCH_A ....
Probab=89.74 E-value=0.93 Score=52.74 Aligned_cols=136 Identities=8% Similarity=0.033 Sum_probs=72.2
Q ss_pred CCCCEEEEEecccCCCChHHHHHHHHHhHccCCCeEEEEEeCCCCCCcccHHHHHHHHHHHHHHHhcCCCCcEEEccCcC
Q 003947 546 SSKPILFTMARLDRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYGLIDTYKLNGQFRWISSQM 625 (784)
Q Consensus 546 ~~k~iIl~vGRL~~~Kgi~~LieA~~~l~~~~~~v~LvIVG~g~~~~s~d~ee~~~~~~l~~li~~l~L~~~V~flG~~~ 625 (784)
++..++++.|.+.. ...+..++++.+.-+..|. ++++.-.+.. .-.+++++....
T Consensus 275 ~~~vv~vsfGs~~~-~~~~~~~~~~~~~~~~~~~-~~iW~~~~~~--------------------~~~l~~n~~~~~--- 329 (500)
T PF00201_consen 275 KKGVVYVSFGSIVS-SMPEEKLKEIAEAFENLPQ-RFIWKYEGEP--------------------PENLPKNVLIVK--- 329 (500)
T ss_dssp TTEEEEEE-TSSST-T-HHHHHHHHHHHHHCSTT-EEEEEETCSH--------------------GCHHHTTEEEES---
T ss_pred CCCEEEEecCcccc-hhHHHHHHHHHHHHhhCCC-cccccccccc--------------------cccccceEEEec---
Confidence 34567888898753 2333333333332222344 6666655521 011235676665
Q ss_pred CcCChhHHHHHHHc-cccEEEeCCCCCCCcHHHHHHHHcCCcEEEcCc----cccccccccCceEEEECCCC--HHHHHH
Q 003947 626 NRVRNGELYRYICD-TKGAFVQPALYEAFGLTVVEAMTCGLPTFATCN----GGPAEIIVHGKSGFHIDPYK--GDQATG 698 (784)
Q Consensus 626 ~~v~~~el~~~la~-aadvfV~PS~~E~fGltvlEAMA~GlPVIaT~~----GG~~EiI~dg~~G~li~p~d--~e~lAe 698 (784)
++|..++.. + ..++||.= |=-.++.||+.+|+|+|+-.. ...+..+++-..|..++..+ .+++.+
T Consensus 330 -W~PQ~~lL~---hp~v~~fitH----gG~~s~~Ea~~~gvP~l~~P~~~DQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ 401 (500)
T PF00201_consen 330 -WLPQNDLLA---HPRVKLFITH----GGLNSTQEALYHGVPMLGIPLFGDQPRNAARVEEKGVGVVLDKNDLTEEELRA 401 (500)
T ss_dssp -S--HHHHHT---STTEEEEEES------HHHHHHHHHCT--EEE-GCSTTHHHHHHHHHHTTSEEEEGGGC-SHHHHHH
T ss_pred -cccchhhhh---cccceeeeec----cccchhhhhhhccCCccCCCCcccCCccceEEEEEeeEEEEEecCCcHHHHHH
Confidence 777666543 2 23456642 223579999999999999733 33455555555788887554 455666
Q ss_pred HHHHHHHHhcCCHHHHHHHH
Q 003947 699 ILVDFFEKCKVDPGHWDEIS 718 (784)
Q Consensus 699 ~I~~~l~~ll~dp~~~~~m~ 718 (784)
+|. ++++|+.+++...
T Consensus 402 ai~----~vl~~~~y~~~a~ 417 (500)
T PF00201_consen 402 AIR----EVLENPSYKENAK 417 (500)
T ss_dssp HHH----HHHHSHHHHHHHH
T ss_pred HHH----HHHhhhHHHHHHH
Confidence 665 5557887665443
No 168
>cd03789 GT1_LPS_heptosyltransferase Lipopolysaccharide heptosyltransferase is involved in the biosynthesis of lipooligosaccharide (LOS). Lipopolysaccharide (LPS) is a major component of the outer membrane of gram-negative bacteria. LPS heptosyltransferase transfers heptose molecules from ADP-heptose to 3-deoxy-D-manno-octulosonic acid (KDO), a part of the inner core component of LPS. This family belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=88.60 E-value=3 Score=44.59 Aligned_cols=98 Identities=13% Similarity=0.099 Sum_probs=61.5
Q ss_pred EEEEEecccCCCC--hHHHHHHHHHhHccCCCeEEEEEeCCCCCCcccHHHHHHHHHHHHHHHhcCCCCcEEEccCcCCc
Q 003947 550 ILFTMARLDRVKN--LTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYGLIDTYKLNGQFRWISSQMNR 627 (784)
Q Consensus 550 iIl~vGRL~~~Kg--i~~LieA~~~l~~~~~~v~LvIVG~g~~~~s~d~ee~~~~~~l~~li~~l~L~~~V~flG~~~~~ 627 (784)
+++..|.-.+.|. .+...+.+..+.+. +++++++|+..+ .+...++.+..+....+.+.| .
T Consensus 124 i~i~~~~~~~~k~w~~~~~~~l~~~l~~~--~~~ivl~g~~~e-----------~~~~~~i~~~~~~~~~~~~~~----~ 186 (279)
T cd03789 124 VVLPPGASGPAKRWPAERFAALADRLLAR--GARVVLTGGPAE-----------RELAEEIAAALGGPRVVNLAG----K 186 (279)
T ss_pred EEECCCCCCccccCCHHHHHHHHHHHHHC--CCEEEEEechhh-----------HHHHHHHHHhcCCCccccCcC----C
Confidence 4444544344444 45777777777664 789999987532 222333344433223345566 5
Q ss_pred CChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEc
Q 003947 628 VRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFAT 670 (784)
Q Consensus 628 v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMA~GlPVIaT 670 (784)
.+..++..+++. +|++|.+. + | ++-=|.+.|+|+|+-
T Consensus 187 ~~l~e~~~li~~-~~l~I~~D---s-g-~~HlA~a~~~p~i~l 223 (279)
T cd03789 187 TSLRELAALLAR-ADLVVTND---S-G-PMHLAAALGTPTVAL 223 (279)
T ss_pred CCHHHHHHHHHh-CCEEEeeC---C-H-HHHHHHHcCCCEEEE
Confidence 567899999996 99999873 2 3 344456999999985
No 169
>PLN02764 glycosyltransferase family protein
Probab=87.22 E-value=65 Score=37.42 Aligned_cols=154 Identities=8% Similarity=0.033 Sum_probs=77.1
Q ss_pred CCCCEEEEEecccCCCChHHHHHHHHHhHccCCCeEEEEEeCCCCCCcccHHHHHHHHHHHHHHHhcCCCCcEEEccCcC
Q 003947 546 SSKPILFTMARLDRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYGLIDTYKLNGQFRWISSQM 625 (784)
Q Consensus 546 ~~k~iIl~vGRL~~~Kgi~~LieA~~~l~~~~~~v~LvIVG~g~~~~s~d~ee~~~~~~l~~li~~l~L~~~V~flG~~~ 625 (784)
++..+.++.|.+.. -.-+.+-+.+..|......+..|+- .+.... +.. ...-+.+.+.++. .+ +...|
T Consensus 256 ~~sVvyvsfGS~~~-~~~~q~~ela~gL~~s~~pflwv~r-~~~~~~--~~~-~~lp~~f~~r~~g---rG-~v~~~--- 323 (453)
T PLN02764 256 PDSVVFCALGSQVI-LEKDQFQELCLGMELTGSPFLVAVK-PPRGSS--TIQ-EALPEGFEERVKG---RG-VVWGG--- 323 (453)
T ss_pred CCceEEEeeccccc-CCHHHHHHHHHHHHhCCCCeEEEEe-CCCCCc--chh-hhCCcchHhhhcc---CC-cEEeC---
Confidence 44566778887743 2335556655555443334554443 211100 000 0000111111221 12 34444
Q ss_pred CcCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcCccc----ccccccc-CceEEEECC-----CCHHH
Q 003947 626 NRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCNGG----PAEIIVH-GKSGFHIDP-----YKGDQ 695 (784)
Q Consensus 626 ~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMA~GlPVIaT~~GG----~~EiI~d-g~~G~li~p-----~d~e~ 695 (784)
++|..++... . +.++||.- -| -++++||+.+|+|+|+-...+ .+..+.+ -..|+.+.+ -+.++
T Consensus 324 -W~PQ~~vL~h-~-~v~~FvtH---~G-~nS~~Eal~~GVP~l~~P~~~DQ~~na~~l~~~~g~gv~~~~~~~~~~~~e~ 396 (453)
T PLN02764 324 -WVQQPLILSH-P-SVGCFVSH---CG-FGSMWESLLSDCQIVLVPQLGDQVLNTRLLSDELKVSVEVAREETGWFSKES 396 (453)
T ss_pred -CCCHHHHhcC-c-ccCeEEec---CC-chHHHHHHHcCCCEEeCCcccchHHHHHHHHHHhceEEEeccccCCccCHHH
Confidence 6666676653 1 24567753 23 358999999999999974433 3445533 346666533 25677
Q ss_pred HHHHHHHHHHHhcCCH-HHHHHHHHHHH
Q 003947 696 ATGILVDFFEKCKVDP-GHWDEISQGGL 722 (784)
Q Consensus 696 lAe~I~~~l~~ll~dp-~~~~~m~~~a~ 722 (784)
+++++.+++ .++ +..+++.++++
T Consensus 397 i~~av~~vm----~~~~~~g~~~r~~a~ 420 (453)
T PLN02764 397 LRDAINSVM----KRDSEIGNLVKKNHT 420 (453)
T ss_pred HHHHHHHHh----cCCchhHHHHHHHHH
Confidence 777776544 454 33444444443
No 170
>PRK10422 lipopolysaccharide core biosynthesis protein; Provisional
Probab=86.93 E-value=5.9 Score=44.00 Aligned_cols=103 Identities=9% Similarity=0.027 Sum_probs=64.1
Q ss_pred CCCEEEEEecccCCCChH--HHHHHHHHhHccCCCeEEEEEeCCCCCCcccHHHHHHHHHHHHHHHhcCCCCcEEEccCc
Q 003947 547 SKPILFTMARLDRVKNLT--GLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYGLIDTYKLNGQFRWISSQ 624 (784)
Q Consensus 547 ~k~iIl~vGRL~~~Kgi~--~LieA~~~l~~~~~~v~LvIVG~g~~~~s~d~ee~~~~~~l~~li~~l~L~~~V~flG~~ 624 (784)
++.+++..|.-.+.|... ...+.+..+.+ .+.+++++|+..+ +|. +...++.+.......+.+.|
T Consensus 183 ~~~i~i~pga~~~~K~Wp~e~fa~l~~~L~~--~~~~vvl~ggp~e------~e~---~~~~~i~~~~~~~~~~~l~g-- 249 (352)
T PRK10422 183 QNYVVIQPTARQIFKCWDNDKFSAVIDALQA--RGYEVVLTSGPDK------DDL---ACVNEIAQGCQTPPVTALAG-- 249 (352)
T ss_pred CCeEEEecCCCccccCCCHHHHHHHHHHHHH--CCCeEEEEcCCCh------HHH---HHHHHHHHhcCCCccccccC--
Confidence 455667777655666654 56666666654 3578888876532 111 22233333322223355666
Q ss_pred CCcCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEc
Q 003947 625 MNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFAT 670 (784)
Q Consensus 625 ~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMA~GlPVIaT 670 (784)
..+..++..+++. ++++|-.- + | ..-=|-|.|+|||+-
T Consensus 250 --~~sL~el~ali~~-a~l~v~nD---S-G-p~HlAaA~g~P~v~l 287 (352)
T PRK10422 250 --KTTFPELGALIDH-AQLFIGVD---S-A-PAHIAAAVNTPLICL 287 (352)
T ss_pred --CCCHHHHHHHHHh-CCEEEecC---C-H-HHHHHHHcCCCEEEE
Confidence 6778999999996 99999763 2 2 344477899999984
No 171
>PLN03015 UDP-glucosyl transferase
Probab=86.04 E-value=76 Score=37.05 Aligned_cols=72 Identities=14% Similarity=0.124 Sum_probs=40.5
Q ss_pred cCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcCccc----ccccc-ccCceEEEEC------CCCHHH
Q 003947 627 RVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCNGG----PAEII-VHGKSGFHID------PYKGDQ 695 (784)
Q Consensus 627 ~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMA~GlPVIaT~~GG----~~EiI-~dg~~G~li~------p~d~e~ 695 (784)
+++..++... . +.+.||.- -| -++++||+++|+|+|+-..-+ ....+ +.-..|.-+. .-..++
T Consensus 342 W~PQ~~vL~h-~-~vg~fvtH---~G-wnS~~Eai~~GvP~v~~P~~~DQ~~na~~~~~~~gvg~~~~~~~~~~~v~~e~ 415 (470)
T PLN03015 342 WAPQVEILSH-R-SIGGFLSH---CG-WSSVLESLTKGVPIVAWPLYAEQWMNATLLTEEIGVAVRTSELPSEKVIGREE 415 (470)
T ss_pred cCCHHHHhcc-C-ccCeEEec---CC-chhHHHHHHcCCCEEecccccchHHHHHHHHHHhCeeEEecccccCCccCHHH
Confidence 5555565552 1 23456643 22 348999999999999964322 23333 3334566553 124566
Q ss_pred HHHHHHHHH
Q 003947 696 ATGILVDFF 704 (784)
Q Consensus 696 lAe~I~~~l 704 (784)
+++++.+.+
T Consensus 416 i~~~v~~lm 424 (470)
T PLN03015 416 VASLVRKIV 424 (470)
T ss_pred HHHHHHHHH
Confidence 666666444
No 172
>TIGR02195 heptsyl_trn_II lipopolysaccharide heptosyltransferase II. This family consists of examples of ADP-heptose:LPS heptosyltransferase II, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria.
Probab=85.68 E-value=8.2 Score=42.36 Aligned_cols=100 Identities=15% Similarity=0.107 Sum_probs=61.2
Q ss_pred CCC-EEEEEec-ccCCCChH--HHHHHHHHhHccCCCeEEEEEeCCCCCCcccHHHHHHHHHHHHHHHhcCCCCcEEEcc
Q 003947 547 SKP-ILFTMAR-LDRVKNLT--GLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYGLIDTYKLNGQFRWIS 622 (784)
Q Consensus 547 ~k~-iIl~vGR-L~~~Kgi~--~LieA~~~l~~~~~~v~LvIVG~g~~~~s~d~ee~~~~~~l~~li~~l~L~~~V~flG 622 (784)
+++ +++..|. ..+.|... ...+.+..+.+ .+.+++++|+..+ . +...++.+..+ ...+...|
T Consensus 173 ~~~~i~i~pga~~~~~K~Wp~e~~~~li~~l~~--~~~~ivl~G~~~e--------~---~~~~~i~~~~~-~~~~~l~g 238 (334)
T TIGR02195 173 ERPIIAFCPGAEFGPAKRWPHEHYAELAKRLID--QGYQVVLFGSAKD--------H---PAGNEIEALLP-GELRNLAG 238 (334)
T ss_pred CCCEEEEcCCCCCCccCCCCHHHHHHHHHHHHH--CCCEEEEEEChhh--------H---HHHHHHHHhCC-cccccCCC
Confidence 344 4455554 34566655 67777766654 2478899987632 1 22223332221 12233556
Q ss_pred CcCCcCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEc
Q 003947 623 SQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFAT 670 (784)
Q Consensus 623 ~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMA~GlPVIaT 670 (784)
..+-.++..+++. +|++|..- + | .+-=|-|.|+|+|+-
T Consensus 239 ----~~sL~el~ali~~-a~l~I~~D---S-G-p~HlAaA~~~P~i~l 276 (334)
T TIGR02195 239 ----ETSLDEAVDLIAL-AKAVVTND---S-G-LMHVAAALNRPLVAL 276 (334)
T ss_pred ----CCCHHHHHHHHHh-CCEEEeeC---C-H-HHHHHHHcCCCEEEE
Confidence 6678899999996 99999763 2 2 344577999999983
No 173
>PF01075 Glyco_transf_9: Glycosyltransferase family 9 (heptosyltransferase); InterPro: IPR002201 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 9 GT9 from CAZY comprises enzymes with two known activity; lipopolysaccharide N-acetylglucosaminyltransferase (2.4.1.56 from EC), heptosyltransferase (2.4 from EC). Heptosyltransferase I is thought to add L-glycero-D-manno-heptose to the inner 3-deoxy-D-manno-octulosonic acid (Kdo) residue of the lipopolysaccharide core []. Heptosyltransferase II is a glycosyltransferase involved in the synthesis of the inner core region of lipopolysaccharide []. Lipopolysaccharide is a major component of the outer leaflet of the outer membrane in Gram-negative bacteria. It is composed of three domains; lipid A, Core oligosaccharide and the O-antigen. These enzymes transfer heptose to the lipopolysaccharide core [].; GO: 0016757 transferase activity, transferring glycosyl groups, 0008152 metabolic process; PDB: 1PSW_A 2H1F_A 2GT1_A 3TOV_A 2H1H_A.
Probab=85.39 E-value=8.9 Score=39.93 Aligned_cols=103 Identities=17% Similarity=0.095 Sum_probs=59.2
Q ss_pred CCCCEEEEEecccCCCChHH--HHHHHHHhHccCCCeEEEEEeCCCCCCcccHHHHHHHHHHHHHHHhcCCCCcEEEccC
Q 003947 546 SSKPILFTMARLDRVKNLTG--LVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYGLIDTYKLNGQFRWISS 623 (784)
Q Consensus 546 ~~k~iIl~vGRL~~~Kgi~~--LieA~~~l~~~~~~v~LvIVG~g~~~~s~d~ee~~~~~~l~~li~~l~L~~~V~flG~ 623 (784)
+++.+++..|.-.+.|.... ..+.+..+.+.+ ++++++|+..+ . +.+....+.+... ...+.+.|
T Consensus 104 ~~~~i~i~~~a~~~~k~wp~e~~~~l~~~l~~~~--~~vvl~g~~~~--------~-~~~~~~~~~~~~~-~~~~~~~~- 170 (247)
T PF01075_consen 104 DKPYIGINPGASWPSKRWPAEKWAELIERLKERG--YRVVLLGGPEE--------Q-EKEIADQIAAGLQ-NPVINLAG- 170 (247)
T ss_dssp TSSEEEEE---SSGGGS--HHHHHHHHHHHCCCT---EEEE--SSHH--------H-HHHHHHHHHTTHT-TTTEEETT-
T ss_pred cCCeEEEeecCCCccccCCHHHHHHHHHHHHhhC--ceEEEEccchH--------H-HHHHHHHHHHhcc-cceEeecC-
Confidence 34556777776667777654 777777776643 78899987721 0 1222223333222 12577887
Q ss_pred cCCcCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEc
Q 003947 624 QMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFAT 670 (784)
Q Consensus 624 ~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMA~GlPVIaT 670 (784)
..+..++..+++. +|++|.+- + -.+-=|.|.|+|+|+=
T Consensus 171 ---~~~l~e~~ali~~-a~~~I~~D---t--g~~HlA~a~~~p~v~l 208 (247)
T PF01075_consen 171 ---KTSLRELAALISR-ADLVIGND---T--GPMHLAAALGTPTVAL 208 (247)
T ss_dssp ---TS-HHHHHHHHHT-SSEEEEES---S--HHHHHHHHTT--EEEE
T ss_pred ---CCCHHHHHHHHhc-CCEEEecC---C--hHHHHHHHHhCCEEEE
Confidence 6678899999996 99999873 3 2455588999999985
No 174
>PRK05562 precorrin-2 dehydrogenase; Provisional
Probab=82.27 E-value=56 Score=34.23 Aligned_cols=139 Identities=9% Similarity=-0.065 Sum_probs=74.9
Q ss_pred HHHHHHHHHhHccCCCeEEEEEeCCCCCCcccHHHHHHHHHHHHHHHhcCCCCcEEEccCcCCcCChhHHHHHHHccccE
Q 003947 564 TGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYGLIDTYKLNGQFRWISSQMNRVRNGELYRYICDTKGA 643 (784)
Q Consensus 564 ~~LieA~~~l~~~~~~v~LvIVG~g~~~~s~d~ee~~~~~~l~~li~~l~L~~~V~flG~~~~~v~~~el~~~la~aadv 643 (784)
....+-+..+.+ -.+++.||..... +++.++++ .++|+|.-. ....++ +.+ +++
T Consensus 35 ~VA~RK~~~Ll~--~gA~VtVVap~i~------------~el~~l~~----~~~i~~~~r---~~~~~d----l~g-~~L 88 (223)
T PRK05562 35 KAAFIKGKTFLK--KGCYVYILSKKFS------------KEFLDLKK----YGNLKLIKG---NYDKEF----IKD-KHL 88 (223)
T ss_pred HHHHHHHHHHHh--CCCEEEEEcCCCC------------HHHHHHHh----CCCEEEEeC---CCChHH----hCC-CcE
Confidence 333333444444 3577777776543 23333333 456888751 222233 343 555
Q ss_pred EEeCCCCCCCcH-HHHHHHHcCCcEEEcCccccccc-----cccCceEEEE-CCCCHHHHHHHHHHHHHHhcCCHHHHHH
Q 003947 644 FVQPALYEAFGL-TVVEAMTCGLPTFATCNGGPAEI-----IVHGKSGFHI-DPYKGDQATGILVDFFEKCKVDPGHWDE 716 (784)
Q Consensus 644 fV~PS~~E~fGl-tvlEAMA~GlPVIaT~~GG~~Ei-----I~dg~~G~li-~p~d~e~lAe~I~~~l~~ll~dp~~~~~ 716 (784)
++..+.-+...- ..-+|.+.|.+|.+.+.....++ +..|.--+-| ..+....+|..|.+-++.++.+-+.+.+
T Consensus 89 ViaATdD~~vN~~I~~~a~~~~~lvn~vd~p~~~dFi~PAiv~rg~l~IaIST~G~sP~lar~lR~~ie~~l~~~~~l~~ 168 (223)
T PRK05562 89 IVIATDDEKLNNKIRKHCDRLYKLYIDCSDYKKGLCIIPYQRSTKNFVFALNTKGGSPKTSVFIGEKVKNFLKKYDDFIE 168 (223)
T ss_pred EEECCCCHHHHHHHHHHHHHcCCeEEEcCCcccCeEEeeeEEecCCEEEEEECCCcCcHHHHHHHHHHHHHHHHHHHHHH
Confidence 554444333333 34566788999998766544444 3333222222 2234557888888888877755455556
Q ss_pred HHHHHHHHHHHh
Q 003947 717 ISQGGLKRIQEK 728 (784)
Q Consensus 717 m~~~a~~~v~~~ 728 (784)
.....|+.+.+.
T Consensus 169 ~l~~~R~~vk~~ 180 (223)
T PRK05562 169 YVTKIRNKAKKN 180 (223)
T ss_pred HHHHHHHHHHhh
Confidence 666667776554
No 175
>TIGR03609 S_layer_CsaB polysaccharide pyruvyl transferase CsaB. The CsaB protein (cell surface anchoring B) of Bacillus anthracis adds a pyruvoyl group to peptidoglycan-associated polysaccharide. This addition is required for proteins with an S-layer homology domain (pfam00395) to bind. Within the larger group of proteins described by Pfam model pfam04230, this model represents a distinct clade that nearly exactly follows the phylogenetic distribution of the S-layer homology domain (pfam00395).
Probab=81.59 E-value=63 Score=34.81 Aligned_cols=86 Identities=15% Similarity=0.108 Sum_probs=50.5
Q ss_pred hHHHHHHHHHhHccCCCeEEEEEeCCCCCCcccHHHHHHHHHHHHHHHhcCCCCcEEEccCcCCcCChhHHHHHHHcccc
Q 003947 563 LTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYGLIDTYKLNGQFRWISSQMNRVRNGELYRYICDTKG 642 (784)
Q Consensus 563 i~~LieA~~~l~~~~~~v~LvIVG~g~~~~s~d~ee~~~~~~l~~li~~l~L~~~V~flG~~~~~v~~~el~~~la~aad 642 (784)
+..+++++..+.+. .+.+++++..... .| .+..+++.+.+.-...+. . ..+..++..+++. ++
T Consensus 190 ~~~l~~~l~~l~~~-~g~~v~~i~~~~~---~D------~~~~~~l~~~~~~~~~i~--~----~~~~~e~~~~i~~-~~ 252 (298)
T TIGR03609 190 LLRLLRALDRLQRD-TGAFVLFLPFQQP---QD------LPLARALRDQLLGPAEVL--S----PLDPEELLGLFAS-AR 252 (298)
T ss_pred HHHHHHHHHHHHHh-hCCeEEEEeCCcc---hh------HHHHHHHHHhcCCCcEEE--e----cCCHHHHHHHHhh-CC
Confidence 45666777666553 2456656554321 11 122334444433233332 2 4567899999996 88
Q ss_pred EEEeCCCCCCCcHHHHHHHHcCCcEEEc
Q 003947 643 AFVQPALYEAFGLTVVEAMTCGLPTFAT 670 (784)
Q Consensus 643 vfV~PS~~E~fGltvlEAMA~GlPVIaT 670 (784)
++|-..++ ..+=|+++|+|+++-
T Consensus 253 ~vI~~RlH-----~~I~A~~~gvP~i~i 275 (298)
T TIGR03609 253 LVIGMRLH-----ALILAAAAGVPFVAL 275 (298)
T ss_pred EEEEechH-----HHHHHHHcCCCEEEe
Confidence 88755432 467799999999974
No 176
>PF10087 DUF2325: Uncharacterized protein conserved in bacteria (DUF2325); InterPro: IPR016772 There is currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=81.32 E-value=2.6 Score=37.87 Aligned_cols=84 Identities=13% Similarity=0.171 Sum_probs=57.1
Q ss_pred EEEEeCCCCCCcccHHHHHHHHHHHHHHHhcCCCCcEEEccCcCCcCChhH--HHHHHHccccEEEeCCCCCCCcH---H
Q 003947 582 LVVVGGDRRKESKDLEEQAEMKKMYGLIDTYKLNGQFRWISSQMNRVRNGE--LYRYICDTKGAFVQPALYEAFGL---T 656 (784)
Q Consensus 582 LvIVG~g~~~~s~d~ee~~~~~~l~~li~~l~L~~~V~flG~~~~~v~~~e--l~~~la~aadvfV~PS~~E~fGl---t 656 (784)
++|||+-.+ ....+++.++++|.. +.++|... .....+ +...+.+ +|++|++..+=+... +
T Consensus 2 vliVGG~~~----------~~~~~~~~~~~~G~~--~~~hg~~~-~~~~~~~~l~~~i~~-aD~VIv~t~~vsH~~~~~v 67 (97)
T PF10087_consen 2 VLIVGGRED----------RERRYKRILEKYGGK--LIHHGRDG-GDEKKASRLPSKIKK-ADLVIVFTDYVSHNAMWKV 67 (97)
T ss_pred EEEEcCCcc----------cHHHHHHHHHHcCCE--EEEEecCC-CCccchhHHHHhcCC-CCEEEEEeCCcChHHHHHH
Confidence 678888432 246788889998863 44544222 333334 8888886 899999887555443 3
Q ss_pred HHHHHHcCCcEEEcCcccccccc
Q 003947 657 VVEAMTCGLPTFATCNGGPAEII 679 (784)
Q Consensus 657 vlEAMA~GlPVIaT~~GG~~EiI 679 (784)
--+|-..|+|++.++..|...+.
T Consensus 68 k~~akk~~ip~~~~~~~~~~~l~ 90 (97)
T PF10087_consen 68 KKAAKKYGIPIIYSRSRGVSSLE 90 (97)
T ss_pred HHHHHHcCCcEEEECCCCHHHHH
Confidence 46788899999999877665543
No 177
>PF12038 DUF3524: Domain of unknown function (DUF3524); InterPro: IPR022701 This domain is functionally uncharacterised and is found in bacteria and eukaryotes. It is about 170 amino acids in length and is found associated with PF00534 from PFAM. Two conserved sequence motifs are found within this entry: HENQ and FNS. There is also a single completely conserved residue S that may be functionally important.
Probab=81.31 E-value=4.3 Score=40.32 Aligned_cols=80 Identities=15% Similarity=0.167 Sum_probs=44.1
Q ss_pred CCCceEEEEcCCCh-hHHHHHHHHhCCCcEEEEecCCcccCCCCCcchhhhccccccccchhhhhHHHhcccCEEEecCh
Q 003947 381 QCKPDLIIGNYSDG-NIVASLLAHKLDVTQCTIAHALELTKYPDSDINWKKLDDKYHFSCQFTADLFAMNRTDFIITSTF 459 (784)
Q Consensus 381 ~~~pDIIh~~~~~~-~lva~llar~~gvp~V~t~H~l~~~k~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~ 459 (784)
...+|+|++.+-.. +-...+.....++|.+..+|.... .||.+...-.++. |.+ ....+.-.||.|+.+|.
T Consensus 57 ~~~~dll~aTsmldLa~l~gL~p~l~~~p~ilYFHENQl-~YP~~~~~~rd~~--~~~-----~ni~saLaAD~v~FNS~ 128 (168)
T PF12038_consen 57 SHSYDLLFATSMLDLATLRGLRPDLANVPKILYFHENQL-AYPVSPGQERDFQ--YGM-----NNIYSALAADRVVFNSA 128 (168)
T ss_pred ccCCCEEEeeccccHHHHHhhccCCCCCCEEEEEecCcc-cCCCCCCcccccc--HHH-----HHHHHHHhceeeeecch
Confidence 44689999865432 212222223456999999998643 3444432222221 211 12235567999999997
Q ss_pred HhHhhcccc
Q 003947 460 QEIAGSKDT 468 (784)
Q Consensus 460 ~~~~~~~~~ 468 (784)
.-.+..-+.
T Consensus 129 ~nr~sFL~~ 137 (168)
T PF12038_consen 129 FNRDSFLDG 137 (168)
T ss_pred hhHHHHHHH
Confidence 655533333
No 178
>PF03401 TctC: Tripartite tricarboxylate transporter family receptor; InterPro: IPR005064 Bordetella pertussis, the causative agent of human whooping cough (pertussis), is an obligate human pathogen with diverse high-affinity transport systems for the assimilation of iron, a biometal that is essential for growth []. Periplasmic binding proteins of a new family, particularly well represented in this organism (and more generally in beta-proteobacteria), have been called Bug receptors []. They adopt a characteristic Venus flytrap fold with two globular domains bisected by a ligand-binding cleft. The family is specific for carboxylated solutes, with a characteristic mode of binding involving two highly conserved beta strand-beta turn-alpha helix motifs originating from each domain. These two motifs form hydrogen bonds with a carboxylate group of the ligand, both directly and via conserved water molecules, and have thus been termed the carboxylate pincers. Domain 1 recognises the ligand and the carboxylate group serves as an initial anchoring point. Domain 2 discriminates between productively and non-productively bound ligands as proper interactions with this domain is needed for the of the closed conformation []. BugE has a glutamate bound ligand. No charged residues are involved in glutamate binding by BugE, unlike what has been described for all glutamate receptors reported so far. The Bug architecture is highly conserved despite limited sequence identity [].; GO: 0030288 outer membrane-bounded periplasmic space; PDB: 2QPQ_C 2DVZ_A 2F5X_A.
Probab=80.66 E-value=23 Score=38.05 Aligned_cols=150 Identities=15% Similarity=0.125 Sum_probs=85.3
Q ss_pred CEEEEEecccCCCChHHHHHHHHHhHccCCCeEEEEEeCCCCCCcccHHHHHHHHHHHHHHHhcCCCCcEEEccCcCCcC
Q 003947 549 PILFTMARLDRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYGLIDTYKLNGQFRWISSQMNRV 628 (784)
Q Consensus 549 ~iIl~vGRL~~~Kgi~~LieA~~~l~~~~~~v~LvIVG~g~~~~s~d~ee~~~~~~l~~li~~l~L~~~V~flG~~~~~v 628 (784)
+.++.++.=.+.|+++.+++++++.+. .+++-..|.|.. .. =....+.+..|++ ++++++..
T Consensus 79 ~~vl~v~~dsp~~t~~eli~~ak~~p~---~~~~g~~g~g~~---------~h-l~~~~l~~~~G~~--~~~Vpy~G--- 140 (274)
T PF03401_consen 79 PNVLVVRADSPYKTLEELIEYAKANPG---KLTFGSSGPGSS---------DH-LAAALLAKAAGIK--FTHVPYDG--- 140 (274)
T ss_dssp EEEEEEETTSS-SSHHHHHHHHHCSCC---C-EEEESSTTSH---------HH-HHHHHHHHHHT-----EEEE-SS---
T ss_pred ceEEEEeCCCccccHHHHHHHHHhCCC---CeEEEecCCCch---------HH-HHHHHHHHHhCCc--eEEEEeCC---
Confidence 566777776789999999999876533 344444443321 11 1234456677764 45555322
Q ss_pred ChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCC--cEEEc---Cccc-----------cccccccCceEEEECCCC
Q 003947 629 RNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGL--PTFAT---CNGG-----------PAEIIVHGKSGFHIDPYK 692 (784)
Q Consensus 629 ~~~el~~~la~aadvfV~PS~~E~fGltvlEAMA~Gl--PVIaT---~~GG-----------~~EiI~dg~~G~li~p~d 692 (784)
..+.+..++....|+.+.. .-......-.|. |+.++ +... ..++....-.|++.+++-
T Consensus 141 ~~~~~~allgG~vd~~~~~------~~~~~~~~~~G~~k~Lav~~~~r~~~~pdvPT~~E~G~~d~~~~~~~g~~~p~gt 214 (274)
T PF03401_consen 141 GAEALTALLGGHVDAAFGS------PGEALPYVEAGDLKPLAVFSDERSPALPDVPTFKEQGYPDIVFGSWRGLFAPKGT 214 (274)
T ss_dssp HHHHHHHHHTTSSSEEEEE------HHHHHHHHHTTSEEEEEECSSS-BTTCTTS-BTTTTT-TTG--EEEEEEEEETTS
T ss_pred ccHHHHHHhCCeeeEEeec------HHHHHHHHhCCCceEEEEecCccccccCCCCCHHHhCccceeeeeeeeeecCCCC
Confidence 2456677777777776653 123344444443 22221 1111 223333345689999999
Q ss_pred HHHHHHHHHHHHHHhcCCHHHHHHHHHHHH
Q 003947 693 GDQATGILVDFFEKCKVDPGHWDEISQGGL 722 (784)
Q Consensus 693 ~e~lAe~I~~~l~~ll~dp~~~~~m~~~a~ 722 (784)
+++..+++.+.+++..+||+..+.+.+.+.
T Consensus 215 p~~~~~~l~~a~~~~~~~pe~~~~~~~~g~ 244 (274)
T PF03401_consen 215 PDEIVDKLADAIKKALEDPEFQEFLEKMGL 244 (274)
T ss_dssp -HHHHHHHHHHHHHHHT-HHHHHHHHHHTE
T ss_pred CHHHHHHHHHHHHHHhCCHHHHHHHHHCCC
Confidence 999999999999999999998777666554
No 179
>KOG4626 consensus O-linked N-acetylglucosamine transferase OGT [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms]
Probab=80.57 E-value=18 Score=42.79 Aligned_cols=197 Identities=12% Similarity=0.092 Sum_probs=122.7
Q ss_pred hhhhccccCCCCCEEEEEecccCCCChHHHHHHHHHhHccCCCeEEEEEeCCCCCCcccHHHHHHHHHHHHHHHhcCCC-
Q 003947 537 KEHLCVLKDSSKPILFTMARLDRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYGLIDTYKLN- 615 (784)
Q Consensus 537 ~~~~gll~~~~k~iIl~vGRL~~~Kgi~~LieA~~~l~~~~~~v~LvIVG~g~~~~s~d~ee~~~~~~l~~li~~l~L~- 615 (784)
|..+|+ +.+..++...-.| .|=-...++.+.++.+.-|+..|++.---.- -...++..+++.|++
T Consensus 750 r~~y~L--p~d~vvf~~FNqL--yKidP~~l~~W~~ILk~VPnS~LwllrfPa~----------ge~rf~ty~~~~Gl~p 815 (966)
T KOG4626|consen 750 RSQYGL--PEDAVVFCNFNQL--YKIDPSTLQMWANILKRVPNSVLWLLRFPAV----------GEQRFRTYAEQLGLEP 815 (966)
T ss_pred CCCCCC--CCCeEEEeechhh--hcCCHHHHHHHHHHHHhCCcceeEEEecccc----------chHHHHHHHHHhCCCc
Confidence 345676 5555555544444 3444567777777777678888877653211 115678889999985
Q ss_pred CcEEEccCcCCcCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcCcccccccc-----ccCceEEEECC
Q 003947 616 GQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCNGGPAEII-----VHGKSGFHIDP 690 (784)
Q Consensus 616 ~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMA~GlPVIaT~~GG~~EiI-----~dg~~G~li~p 690 (784)
++|.|... ...+|=.+-.. -+||++-+...-|. .|-.|.+.+|+|+|.-...-.+.-| ..-..|-+|.
T Consensus 816 ~riifs~v----a~k~eHvrr~~-LaDv~LDTplcnGh-TTg~dvLw~GvPmVTmpge~lAsrVa~Sll~~~Gl~hlia- 888 (966)
T KOG4626|consen 816 DRIIFSPV----AAKEEHVRRGQ-LADVCLDTPLCNGH-TTGMDVLWAGVPMVTMPGETLASRVAASLLTALGLGHLIA- 888 (966)
T ss_pred cceeeccc----cchHHHHHhhh-hhhhcccCcCcCCc-ccchhhhccCCceeecccHHHHHHHHHHHHHHcccHHHHh-
Confidence 68888863 33344444444 37888877766653 3567889999999975332222211 1111333443
Q ss_pred CCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHH--HhCCHHHHHHHHHHHHHHhhhhhhhhhhhHHHHh
Q 003947 691 YKGDQATGILVDFFEKCKVDPGHWDEISQGGLKRIQ--EKYTWKIYSERLLNLSGVYGFWKHLSKLDCREKN 760 (784)
Q Consensus 691 ~d~e~lAe~I~~~l~~ll~dp~~~~~m~~~a~~~v~--~~ytw~~~a~~ll~ly~~~~~~~~~~~~~~~~~~ 760 (784)
.+-++..+.-. .|..|.+..+++...-+..-. --|+-..++..++++|.. -|+..-+.+..+.+
T Consensus 889 k~~eEY~~iaV----~Latd~~~L~~lr~~l~~~r~~splfd~~q~~~~LE~~y~~--MW~~y~~G~~p~h~ 954 (966)
T KOG4626|consen 889 KNREEYVQIAV----RLATDKEYLKKLRAKLRKARASSPLFDTKQYAKGLERLYLQ--MWKKYCSGEVPDHR 954 (966)
T ss_pred hhHHHHHHHHH----HhhcCHHHHHHHHHHHHHHhcCCCccCchHHHHHHHHHHHH--HHHHhccCCCCchH
Confidence 35555555443 456888888887766554332 238899999999999976 78876665555544
No 180
>PLN03004 UDP-glycosyltransferase
Probab=80.47 E-value=32 Score=39.87 Aligned_cols=83 Identities=14% Similarity=0.073 Sum_probs=51.2
Q ss_pred cEEEccCcCCcCChhHHHHHHHccccE--EEeCCCCCCCcHHHHHHHHcCCcEEEc----Ccccccccccc-CceEEEEC
Q 003947 617 QFRWISSQMNRVRNGELYRYICDTKGA--FVQPALYEAFGLTVVEAMTCGLPTFAT----CNGGPAEIIVH-GKSGFHID 689 (784)
Q Consensus 617 ~V~flG~~~~~v~~~el~~~la~aadv--fV~PS~~E~fGltvlEAMA~GlPVIaT----~~GG~~EiI~d-g~~G~li~ 689 (784)
++...+ +++..++.. ..++ ||.= -| -++++||+++|+|+|+. +.......+.+ -..|..++
T Consensus 335 g~~v~~----W~PQ~~iL~----H~~v~~FvTH---~G-~nS~lEal~~GVP~v~~P~~~DQ~~na~~~~~~~g~g~~l~ 402 (451)
T PLN03004 335 GMVVKS----WAPQVPVLN----HKAVGGFVTH---CG-WNSILEAVCAGVPMVAWPLYAEQRFNRVMIVDEIKIAISMN 402 (451)
T ss_pred cEEEEe----eCCHHHHhC----CCccceEecc---Cc-chHHHHHHHcCCCEEeccccccchhhHHHHHHHhCceEEec
Confidence 455555 556656554 3555 5532 22 35899999999999996 34444555543 35787775
Q ss_pred CC-----CHHHHHHHHHHHHHHhcCCHHHHH
Q 003947 690 PY-----KGDQATGILVDFFEKCKVDPGHWD 715 (784)
Q Consensus 690 p~-----d~e~lAe~I~~~l~~ll~dp~~~~ 715 (784)
.. +.+++++++.++ +.++.+++
T Consensus 403 ~~~~~~~~~e~l~~av~~v----m~~~~~r~ 429 (451)
T PLN03004 403 ESETGFVSSTEVEKRVQEI----IGECPVRE 429 (451)
T ss_pred CCcCCccCHHHHHHHHHHH----hcCHHHHH
Confidence 32 567777777654 45665443
No 181
>PLN02167 UDP-glycosyltransferase family protein
Probab=80.21 E-value=73 Score=37.15 Aligned_cols=72 Identities=17% Similarity=0.180 Sum_probs=43.4
Q ss_pred cCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcCccc----ccc-ccccCceEEEECC---------CC
Q 003947 627 RVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCNGG----PAE-IIVHGKSGFHIDP---------YK 692 (784)
Q Consensus 627 ~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMA~GlPVIaT~~GG----~~E-iI~dg~~G~li~p---------~d 692 (784)
+++..++...= +.++||.= -|++ +++||+++|+|+|+-...+ ... +++.-..|+.++. -+
T Consensus 347 w~PQ~~iL~h~--~vg~fvtH---~G~n-S~~Eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~~~~~~~~~ 420 (475)
T PLN02167 347 WAPQVEILAHK--AIGGFVSH---CGWN-SVLESLWFGVPIATWPMYAEQQLNAFTMVKELGLAVELRLDYVSAYGEIVK 420 (475)
T ss_pred cCCHHHHhcCc--ccCeEEee---CCcc-cHHHHHHcCCCEEeccccccchhhHHHHHHHhCeeEEeecccccccCCccc
Confidence 66666655421 24567753 3433 8999999999999963332 232 2334446776642 25
Q ss_pred HHHHHHHHHHHH
Q 003947 693 GDQATGILVDFF 704 (784)
Q Consensus 693 ~e~lAe~I~~~l 704 (784)
.+++++++.+++
T Consensus 421 ~~~l~~av~~~m 432 (475)
T PLN02167 421 ADEIAGAVRSLM 432 (475)
T ss_pred HHHHHHHHHHHh
Confidence 667777776544
No 182
>TIGR02201 heptsyl_trn_III lipopolysaccharide heptosyltransferase III, putative. This family consists of examples of the putative ADP-heptose:LPS heptosyltransferase III, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria. This enzyme may be less widely distributed than heptosyltransferases I and II.
Probab=80.05 E-value=15 Score=40.47 Aligned_cols=102 Identities=12% Similarity=0.060 Sum_probs=61.8
Q ss_pred CCEEEEEecccCCCCh--HHHHHHHHHhHccCCCeEEEEEeCCCCCCcccHHHHHHHHHHHHHHHhcCCCCcEEEccCcC
Q 003947 548 KPILFTMARLDRVKNL--TGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYGLIDTYKLNGQFRWISSQM 625 (784)
Q Consensus 548 k~iIl~vGRL~~~Kgi--~~LieA~~~l~~~~~~v~LvIVG~g~~~~s~d~ee~~~~~~l~~li~~l~L~~~V~flG~~~ 625 (784)
+.+++..|.-.+.|.. +...+.+..+.+ .+..++++|+..+ +|. +...++.+..+-...+.+.|
T Consensus 182 ~~i~i~p~a~~~~K~Wp~e~~~~l~~~l~~--~~~~ivl~g~p~~------~e~---~~~~~i~~~~~~~~~~~l~g--- 247 (344)
T TIGR02201 182 NYIVIQPTSRWFFKCWDNDRFSALIDALHA--RGYEVVLTSGPDK------DEL---AMVNEIAQGCQTPRVTSLAG--- 247 (344)
T ss_pred CEEEEeCCCCccccCCCHHHHHHHHHHHHh--CCCeEEEecCCCH------HHH---HHHHHHHhhCCCCcccccCC---
Confidence 3455666654455554 455566666544 3578899986421 111 12223333333222344666
Q ss_pred CcCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEc
Q 003947 626 NRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFAT 670 (784)
Q Consensus 626 ~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMA~GlPVIaT 670 (784)
..+..++..+++. ++++|-.- + -.+-=|-|.|+|+|+=
T Consensus 248 -~~sL~el~ali~~-a~l~Vs~D---S--Gp~HlAaA~g~p~v~L 285 (344)
T TIGR02201 248 -KLTLPQLAALIDH-ARLFIGVD---S--VPMHMAAALGTPLVAL 285 (344)
T ss_pred -CCCHHHHHHHHHh-CCEEEecC---C--HHHHHHHHcCCCEEEE
Confidence 6778999999996 99999763 2 2445588999999984
No 183
>COG0859 RfaF ADP-heptose:LPS heptosyltransferase [Cell envelope biogenesis, outer membrane]
Probab=78.50 E-value=19 Score=39.84 Aligned_cols=98 Identities=16% Similarity=0.137 Sum_probs=65.9
Q ss_pred CCEEEEEe-cccCCCChH--HHHHHHHHhHccCCCeEEEEEeCCCCCCcccHHHHHHHHHHHHHHHhcCCCCcEEEccCc
Q 003947 548 KPILFTMA-RLDRVKNLT--GLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYGLIDTYKLNGQFRWISSQ 624 (784)
Q Consensus 548 k~iIl~vG-RL~~~Kgi~--~LieA~~~l~~~~~~v~LvIVG~g~~~~s~d~ee~~~~~~l~~li~~l~L~~~V~flG~~ 624 (784)
+.+++..| .-...|+.+ ...+.+..+.+.+ .++++.|+. + +.+...++.+.++ +.+...|
T Consensus 176 ~~i~i~pg~s~~~~K~wp~e~~~~l~~~l~~~~--~~Vvl~g~~-~----------e~e~~~~i~~~~~--~~~~l~~-- 238 (334)
T COG0859 176 PYIVINPGASRGSAKRWPLEHYAELAELLIAKG--YQVVLFGGP-D----------EEERAEEIAKGLP--NAVILAG-- 238 (334)
T ss_pred CeEEEeccccccccCCCCHHHHHHHHHHHHHCC--CEEEEecCh-H----------HHHHHHHHHHhcC--CccccCC--
Confidence 45566777 555667665 6777777777654 899999987 2 2233444554443 2223566
Q ss_pred CCcCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEc
Q 003947 625 MNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFAT 670 (784)
Q Consensus 625 ~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMA~GlPVIaT 670 (784)
..+-.++..+++. ||++|.+. + | .+-=|-|.|+|+|+-
T Consensus 239 --k~sL~e~~~li~~-a~l~I~~D---S-g-~~HlAaA~~~P~I~i 276 (334)
T COG0859 239 --KTSLEELAALIAG-ADLVIGND---S-G-PMHLAAALGTPTIAL 276 (334)
T ss_pred --CCCHHHHHHHHhc-CCEEEccC---C-h-HHHHHHHcCCCEEEE
Confidence 7788999999996 99988773 2 2 344478999999995
No 184
>TIGR02193 heptsyl_trn_I lipopolysaccharide heptosyltransferase I. This family consists of examples of ADP-heptose:LPS heptosyltransferase I, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria.
Probab=78.11 E-value=25 Score=38.17 Aligned_cols=99 Identities=12% Similarity=0.011 Sum_probs=62.0
Q ss_pred CCCEEEEEecccCCCChH--HHHHHHHHhHccCCCeEEEEEeCCCCCCcccHHHHHHHHHHHHHHHhcCCCCcEEEccCc
Q 003947 547 SKPILFTMARLDRVKNLT--GLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYGLIDTYKLNGQFRWISSQ 624 (784)
Q Consensus 547 ~k~iIl~vGRL~~~Kgi~--~LieA~~~l~~~~~~v~LvIVG~g~~~~s~d~ee~~~~~~l~~li~~l~L~~~V~flG~~ 624 (784)
++.+++..|.=.+.|... ...+.+..+.+. +++++++|+++. | .+...++.+..+ +..+.|
T Consensus 179 ~~~i~i~~gas~~~K~wp~e~~~~l~~~l~~~--~~~~vl~~g~~~-------e---~~~~~~i~~~~~---~~~l~g-- 241 (319)
T TIGR02193 179 APYAVLLHATSRDDKTWPEERWRELARLLLAR--GLQIVLPWGNDA-------E---KQRAERIAEALP---GAVVLP-- 241 (319)
T ss_pred CCEEEEEeCCCcccCCCCHHHHHHHHHHHHHC--CCeEEEeCCCHH-------H---HHHHHHHHhhCC---CCeecC--
Confidence 445566777545666664 666666666542 678888866532 2 222233333322 234566
Q ss_pred CCcCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEc
Q 003947 625 MNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFAT 670 (784)
Q Consensus 625 ~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMA~GlPVIaT 670 (784)
..+-.++..+++. ++++|..- +- .+-=|-|.|+|+|+-
T Consensus 242 --~~sL~el~ali~~-a~l~I~~D---Sg--p~HlAaa~g~P~i~l 279 (319)
T TIGR02193 242 --KMSLAEVAALLAG-ADAVVGVD---TG--LTHLAAALDKPTVTL 279 (319)
T ss_pred --CCCHHHHHHHHHc-CCEEEeCC---Ch--HHHHHHHcCCCEEEE
Confidence 6778999999996 99999873 22 344467889999984
No 185
>PF10933 DUF2827: Protein of unknown function (DUF2827); InterPro: IPR021234 This is a family of uncharacterised proteins found in Burkholderia.
Probab=75.39 E-value=32 Score=38.42 Aligned_cols=166 Identities=11% Similarity=0.152 Sum_probs=107.9
Q ss_pred hhcccc-CCCCCEEEEEecccCCCChHHHHHHHHHhHccCC-CeEEEEEeCCCCCCcccHHHHHHHHHHHHHHHhcCC--
Q 003947 539 HLCVLK-DSSKPILFTMARLDRVKNLTGLVEWYGKNAKLRE-LVNLVVVGGDRRKESKDLEEQAEMKKMYGLIDTYKL-- 614 (784)
Q Consensus 539 ~~gll~-~~~k~iIl~vGRL~~~Kgi~~LieA~~~l~~~~~-~v~LvIVG~g~~~~s~d~ee~~~~~~l~~li~~l~L-- 614 (784)
++|... .+.+.+=++=-+++-.|+-..=+=+..+.-+..| .+..+.|..... ..+-..+...+..+.+
T Consensus 180 ~FGY~p~~~~~RvavfEPNi~vvK~~~~PmLi~E~aYR~~P~~v~~~~V~Nt~~--------~ke~~~F~~f~~~ldlvr 251 (364)
T PF10933_consen 180 RFGYQPGRPGKRVAVFEPNISVVKTCFIPMLICEEAYRADPDAVEHVYVTNTYH--------LKEHPTFVNFANSLDLVR 251 (364)
T ss_pred ccccccCCCCceEEEecCCceEEeecCccHHHHHHHHHhChhhcceEEEecchh--------hhcCHHHHHHHHhhHHhh
Confidence 355532 2334444555566667764332222222222223 456666665543 1233556666776665
Q ss_pred CCcEEEccCcCCcCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHH
Q 003947 615 NGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCNGGPAEIIVHGKSGFHIDPYKGD 694 (784)
Q Consensus 615 ~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMA~GlPVIaT~~GG~~EiI~dg~~G~li~p~d~e 694 (784)
++...|.| +. +++.+++...|++|.-.+.-+.-..-.||+--|=|.|-.. ..+.+ .|+..+..|..
T Consensus 252 ~gkasfeg----R~---~~p~fla~~tD~VvSHqWeN~lNYlY~daLyggYPLVHNS-----~~l~d--~GYYY~~fD~~ 317 (364)
T PF10933_consen 252 DGKASFEG----RF---DFPDFLAQHTDAVVSHQWENPLNYLYYDALYGGYPLVHNS-----PLLKD--VGYYYPDFDAF 317 (364)
T ss_pred cCeeEEee----ec---ChHHHHHhCCCEEEeccccchhhHHHHHHHhcCCCcccCc-----chhcc--cCcCCCCccHH
Confidence 67889988 43 5677888889999988777777778899999999999742 34433 79999999999
Q ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCC
Q 003947 695 QATGILVDFFEKCKVDPGHWDEISQGGLKRIQEKYT 730 (784)
Q Consensus 695 ~lAe~I~~~l~~ll~dp~~~~~m~~~a~~~v~~~yt 730 (784)
+-+++|.+++. ++.+.++...+++++.+ ..++
T Consensus 318 ~G~r~L~~A~~---~HD~~~~~Y~~ra~~~l-~~~~ 349 (364)
T PF10933_consen 318 EGARQLLRAIR---EHDADLDAYRARARRLL-DRLS 349 (364)
T ss_pred HHHHHHHHHHH---HccccHHHHHHHHHHHH-HhhC
Confidence 99999998774 45556677777777665 4443
No 186
>KOG0853 consensus Glycosyltransferase [Cell wall/membrane/envelope biogenesis]
Probab=74.98 E-value=7.7 Score=45.05 Aligned_cols=100 Identities=9% Similarity=-0.050 Sum_probs=62.7
Q ss_pred HHHhcccCEEEecChHhHhhccccccccccccccccccceeeecCCCCCCCceEEecCCCCCCCCCCCcHHHHhhhcchh
Q 003947 445 LFAMNRTDFIITSTFQEIAGSKDTVGQYESHTAFSLPGLYRVVNGIDAFDPKFNIVSPGADMTIYFPYMEEKRRLKHFHS 524 (784)
Q Consensus 445 ~~a~~~AD~IIt~S~~~~~~~~~~vgqYe~~~~f~~p~l~~~~~gi~~f~~k~~VIpnGvD~~~f~p~~~~~~rl~~~~~ 524 (784)
......+|.+++.++..+...+..+ ..++ ..++.+..+++|.+.+.+.-......
T Consensus 204 ~e~~~~~~~~~~ns~~~~~~f~~~~------------------~~L~--~~d~~~~y~ei~~s~~~~~~~~~~~~----- 258 (495)
T KOG0853|consen 204 EETTGLAWKILVNSYFTKRQFKATF------------------VSLS--NSDITSTYPEIDGSWFTYGQYESHLE----- 258 (495)
T ss_pred hhhhhccceEecchhhhhhhhhhhh------------------hhcC--CCCcceeeccccchhccccccccchh-----
Confidence 3456789999999877665322221 1122 34488999999988776521111100
Q ss_pred hhHHhhcCchhhhhhhccccCCCCCEEEEEecccCCCChHHHHHHHHHhHccCC
Q 003947 525 EIEELLYSPVENKEHLCVLKDSSKPILFTMARLDRVKNLTGLVEWYGKNAKLRE 578 (784)
Q Consensus 525 ~~~~~l~~~~~~~~~~gll~~~~k~iIl~vGRL~~~Kgi~~LieA~~~l~~~~~ 578 (784)
-....+...|. ...+..+..+-|+.|.||++.+++++..+...-+
T Consensus 259 -------~~~~~r~~~~v--~~~d~~~~siN~~~pgkd~~l~l~a~~~~~~~i~ 303 (495)
T KOG0853|consen 259 -------LRLPVRLYRGV--SGIDRFFPSINRFEPGKDQDLALPAFTLLHDSIP 303 (495)
T ss_pred -------cccccceeeee--cccceEeeeeeecCCCCCceeehhhHHhhhcccC
Confidence 01112233344 3446788899999999999999999988876544
No 187
>PLN00164 glucosyltransferase; Provisional
Probab=72.66 E-value=75 Score=37.16 Aligned_cols=87 Identities=10% Similarity=0.045 Sum_probs=48.4
Q ss_pred cCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcC----cccccccc-ccCceEEEECC-------CCHH
Q 003947 627 RVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATC----NGGPAEII-VHGKSGFHIDP-------YKGD 694 (784)
Q Consensus 627 ~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMA~GlPVIaT~----~GG~~EiI-~dg~~G~li~p-------~d~e 694 (784)
+++..++... . +.++||.= -|+ ++++||+++|+|+|+-. ..-....+ +.-..|+-++. -+.+
T Consensus 346 w~PQ~~iL~h-~-~vg~fvtH---~Gw-nS~~Eai~~GVP~l~~P~~~DQ~~Na~~~~~~~gvG~~~~~~~~~~~~~~~e 419 (480)
T PLN00164 346 WAPQKEILAH-A-AVGGFVTH---CGW-NSVLESLWHGVPMAPWPLYAEQHLNAFELVADMGVAVAMKVDRKRDNFVEAA 419 (480)
T ss_pred cCCHHHHhcC-c-ccCeEEee---ccc-chHHHHHHcCCCEEeCCccccchhHHHHHHHHhCeEEEeccccccCCcCcHH
Confidence 5555555542 1 12355542 343 48999999999999963 33334333 33356776642 1456
Q ss_pred HHHHHHHHHHHHhcCCHH-HHHHHHHHHHH
Q 003947 695 QATGILVDFFEKCKVDPG-HWDEISQGGLK 723 (784)
Q Consensus 695 ~lAe~I~~~l~~ll~dp~-~~~~m~~~a~~ 723 (784)
+++++|.++ +.+++ ..++|.+++.+
T Consensus 420 ~l~~av~~v----m~~~~~~~~~~r~~a~~ 445 (480)
T PLN00164 420 ELERAVRSL----MGGGEEEGRKAREKAAE 445 (480)
T ss_pred HHHHHHHHH----hcCCchhHHHHHHHHHH
Confidence 777777644 45543 24455544444
No 188
>PRK10964 ADP-heptose:LPS heptosyl transferase I; Provisional
Probab=70.29 E-value=37 Score=37.08 Aligned_cols=97 Identities=13% Similarity=0.071 Sum_probs=59.2
Q ss_pred CEEEEEecccCCCChH--HHHHHHHHhHccCCCeEEEEEeCCCCCCcccHHHHHHHHHHHHHHHhcCCCCcEEEccCcCC
Q 003947 549 PILFTMARLDRVKNLT--GLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYGLIDTYKLNGQFRWISSQMN 626 (784)
Q Consensus 549 ~iIl~vGRL~~~Kgi~--~LieA~~~l~~~~~~v~LvIVG~g~~~~s~d~ee~~~~~~l~~li~~l~L~~~V~flG~~~~ 626 (784)
.+++..|.-...|... ...+.+..+.+ .+..+++.||++. |. +...++.+. ...+...|
T Consensus 180 ~i~~~~~~s~~~k~Wp~e~~a~li~~l~~--~~~~ivl~~G~~~-------e~---~~~~~i~~~---~~~~~l~g---- 240 (322)
T PRK10964 180 YLVFLHATTRDDKHWPEAHWRELIGLLAP--SGLRIKLPWGAEH-------EE---QRAKRLAEG---FPYVEVLP---- 240 (322)
T ss_pred eEEEEeCCCcccccCCHHHHHHHHHHHHH--CCCeEEEeCCCHH-------HH---HHHHHHHcc---CCcceecC----
Confidence 3334445433445544 66777777654 2567777654422 22 222333332 23466777
Q ss_pred cCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEc
Q 003947 627 RVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFAT 670 (784)
Q Consensus 627 ~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMA~GlPVIaT 670 (784)
..+-.++..+++. +|++|..- .-..-=|-|+|+|+|+-
T Consensus 241 ~~sL~elaali~~-a~l~I~nD-----SGp~HlA~A~g~p~val 278 (322)
T PRK10964 241 KLSLEQVARVLAG-AKAVVSVD-----TGLSHLTAALDRPNITL 278 (322)
T ss_pred CCCHHHHHHHHHh-CCEEEecC-----CcHHHHHHHhCCCEEEE
Confidence 6778999999996 99999763 22455588999999984
No 189
>PLN02152 indole-3-acetate beta-glucosyltransferase
Probab=70.26 E-value=92 Score=36.20 Aligned_cols=80 Identities=18% Similarity=0.153 Sum_probs=45.2
Q ss_pred CCcEEEccCcCCcCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcCc----cccccccccC-ceEEEEC
Q 003947 615 NGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCN----GGPAEIIVHG-KSGFHID 689 (784)
Q Consensus 615 ~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMA~GlPVIaT~~----GG~~EiI~dg-~~G~li~ 689 (784)
.++....+ +++..++... . +.++||.- -| .++++||+.+|+|+|+-.. ......+.+. ..|+-+.
T Consensus 326 ~~~g~v~~----W~PQ~~iL~h-~-~vg~fvtH---~G-~nS~~Ea~~~GvP~l~~P~~~DQ~~na~~~~~~~~~G~~~~ 395 (455)
T PLN02152 326 EEVGMIVS----WCSQIEVLRH-R-AVGCFVTH---CG-WSSSLESLVLGVPVVAFPMWSDQPANAKLLEEIWKTGVRVR 395 (455)
T ss_pred cCCeEEEe----eCCHHHHhCC-c-ccceEEee---CC-cccHHHHHHcCCCEEeccccccchHHHHHHHHHhCceEEee
Confidence 34545555 6666665542 1 12345543 22 3589999999999999633 3334444431 2455442
Q ss_pred -----CCCHHHHHHHHHHHH
Q 003947 690 -----PYKGDQATGILVDFF 704 (784)
Q Consensus 690 -----p~d~e~lAe~I~~~l 704 (784)
.-+.+++++++.+++
T Consensus 396 ~~~~~~~~~e~l~~av~~vm 415 (455)
T PLN02152 396 ENSEGLVERGEIRRCLEAVM 415 (455)
T ss_pred cCcCCcCcHHHHHHHHHHHH
Confidence 125677888887554
No 190
>PRK10916 ADP-heptose:LPS heptosyltransferase II; Provisional
Probab=70.17 E-value=36 Score=37.66 Aligned_cols=100 Identities=14% Similarity=0.078 Sum_probs=59.4
Q ss_pred CCEEEEEec-ccCCCChH--HHHHHHHHhHccCCCeEEEEEeCCCCCCcccHHHHHHHHHHHHHHHhcCC--CCc-EEEc
Q 003947 548 KPILFTMAR-LDRVKNLT--GLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYGLIDTYKL--NGQ-FRWI 621 (784)
Q Consensus 548 k~iIl~vGR-L~~~Kgi~--~LieA~~~l~~~~~~v~LvIVG~g~~~~s~d~ee~~~~~~l~~li~~l~L--~~~-V~fl 621 (784)
+.+++..|. ..+.|... ...+.+..+.+ .+++++++|+..+ .+ ...++.+..+- .++ +...
T Consensus 181 ~~i~i~pga~~~~~K~Wp~e~~a~l~~~l~~--~~~~vvl~Gg~~e--------~~---~~~~i~~~~~~~~~~~~~~l~ 247 (348)
T PRK10916 181 PIIGFCPGAEFGPAKRWPHYHYAELAQQLID--EGYQVVLFGSAKD--------HE---AGNEILAALNTEQQAWCRNLA 247 (348)
T ss_pred CEEEEeCCCCCccccCCCHHHHHHHHHHHHH--CCCeEEEEeCHHh--------HH---HHHHHHHhcccccccceeecc
Confidence 344556654 23556543 55666666543 3678888887522 12 22233333221 112 4455
Q ss_pred cCcCCcCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEc
Q 003947 622 SSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFAT 670 (784)
Q Consensus 622 G~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMA~GlPVIaT 670 (784)
| ..+-.++..+++. ++++|-.- + | .+-=|-|.|+|||+-
T Consensus 248 g----~~sL~el~ali~~-a~l~I~nD---T-G-p~HlAaA~g~P~val 286 (348)
T PRK10916 248 G----ETQLEQAVILIAA-CKAIVTND---S-G-LMHVAAALNRPLVAL 286 (348)
T ss_pred C----CCCHHHHHHHHHh-CCEEEecC---C-h-HHHHHHHhCCCEEEE
Confidence 5 6678899999996 99999763 2 2 344588999999973
No 191
>PF06925 MGDG_synth: Monogalactosyldiacylglycerol (MGDG) synthase; InterPro: IPR009695 This entry represents a conserved region of approximately 180 residues found towirds the N terminus of a number of plant and bacterial diacylglycerol glucosyltransferases, such as monogalactosyldiacylglycerol synthase [].; GO: 0016758 transferase activity, transferring hexosyl groups, 0009247 glycolipid biosynthetic process
Probab=69.30 E-value=29 Score=34.27 Aligned_cols=60 Identities=18% Similarity=0.180 Sum_probs=37.0
Q ss_pred CCCceEEEEcCCChhHH-HHHH-HHh-C-CCcEEEEecCCcc-cCCCCCcchhhhccccccccchhhhhHHHhcccCEEE
Q 003947 381 QCKPDLIIGNYSDGNIV-ASLL-AHK-L-DVTQCTIAHALEL-TKYPDSDINWKKLDDKYHFSCQFTADLFAMNRTDFII 455 (784)
Q Consensus 381 ~~~pDIIh~~~~~~~lv-a~ll-ar~-~-gvp~V~t~H~l~~-~k~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~II 455 (784)
..+||+|+|.++.++.+ ...+ ++. . ++|+++.+-++.. .. . +.-..+|..+
T Consensus 87 ~~~PD~IIsThp~~~~~~l~~lk~~~~~~~~p~~tvvTD~~~~H~------~------------------W~~~~~D~y~ 142 (169)
T PF06925_consen 87 EFQPDLIISTHPFPAQVPLSRLKRRGRLPNIPVVTVVTDFDTVHP------F------------------WIHPGVDRYF 142 (169)
T ss_pred hcCCCEEEECCcchhhhHHHHHHHhhcccCCcEEEEEcCCCCCCc------C------------------eecCCCCEEE
Confidence 46999999988876444 3333 333 3 4777655554311 10 1 1346789999
Q ss_pred ecChHhHhh
Q 003947 456 TSTFQEIAG 464 (784)
Q Consensus 456 t~S~~~~~~ 464 (784)
+.|++.++.
T Consensus 143 Vase~~~~~ 151 (169)
T PF06925_consen 143 VASEEVKEE 151 (169)
T ss_pred ECCHHHHHH
Confidence 999888763
No 192
>PF01975 SurE: Survival protein SurE; InterPro: IPR002828 This entry represents a SurE-like structural domain with a 3-layer alpha/bete/alpha topology that bears some topological similarity to the N-terminal domain of the glutaminase/asparaginase family. This domain is found in the stationary phase survival protein SurE, a metal ion-dependent phosphatase found in eubacteria, archaea and eukaryotes. In Escherichia coli, SurE also has activity as a nucleotidase and exopolyphosphatase, and may be involved in the stress response []. E. coli cells with mutations in the surE gene survive poorly in stationary phase []. The structure of SurE homologues have been determined from Thermotoga maritima [] and the archaea Pyrobaculum aerophilum []. The T. maritima SurE homologue has phosphatase activity that is inhibited by vanadate or tungstate, both of which bind adjacent to the divalent metal ion. This domain is found in acid phosphatases (3.1.3.2 from EC), 5'-nucleotidases (3.1.3.5 from EC), 3'-nucleotidases (3.1.3.6 from EC) and exopolyphosphatases (3.6.1.11 from EC).; GO: 0016787 hydrolase activity; PDB: 1L5X_B 2V4O_D 2V4N_A 2WQK_B 2E6G_G 2E69_D 2E6C_C 2E6B_D 2E6E_A 2E6H_A ....
Probab=68.46 E-value=41 Score=34.47 Aligned_cols=38 Identities=13% Similarity=0.170 Sum_probs=26.1
Q ss_pred eEEEEEccCccccccCccCCCCcccchhhhHHHHHHHHHHHHHHHHHcCCCcccceEEEecCCC
Q 003947 255 FNVVIFTPHGYFAQDNVLGYPDTGGQVVYILDQVRALENEMLLRIKQQGLDITPRILIITRLLP 318 (784)
Q Consensus 255 mkI~ivs~h~~~~~~~~lg~p~tGG~~vyv~d~~raLe~eLa~~L~~~GheV~~~i~VvTr~~~ 318 (784)
|||++....|+-. ..+. .|++.|++.||+|. |+++...
T Consensus 1 M~ILlTNDDGi~a--------------~Gi~--------aL~~~L~~~g~~V~----VvAP~~~ 38 (196)
T PF01975_consen 1 MRILLTNDDGIDA--------------PGIR--------ALAKALSALGHDVV----VVAPDSE 38 (196)
T ss_dssp SEEEEE-SS-TTS--------------HHHH--------HHHHHHTTTSSEEE----EEEESSS
T ss_pred CeEEEEcCCCCCC--------------HHHH--------HHHHHHHhcCCeEE----EEeCCCC
Confidence 8999999888832 1244 45666777789999 9987744
No 193
>PF03033 Glyco_transf_28: Glycosyltransferase family 28 N-terminal domain; InterPro: IPR004276 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 28 GT28 from CAZY comprises enzymes with a number of known activities; 1,2-diacylglycerol 3-beta-galactosyltransferase (2.4.1.46 from EC); 1,2-diacylglycerol 3-beta-glucosyltransferase (2.4.1.157 from EC); beta-N-acetylglucosamine transferase (2.4.1 from EC).; GO: 0016758 transferase activity, transferring hexosyl groups, 0005975 carbohydrate metabolic process, 0030259 lipid glycosylation; PDB: 2IYF_B 2YJN_A 2P6P_A 1PNV_A 3H4T_A 3H4I_A 1PN3_B 3IA7_B 1NLM_B 1F0K_B ....
Probab=68.33 E-value=3.6 Score=38.73 Aligned_cols=111 Identities=14% Similarity=0.092 Sum_probs=53.1
Q ss_pred cccchhhhHHHHHHHHHHHHHHHHHcCCCcccceEEEecCCCCCCCCCcCcceeeecCcCCeEEEEccCC-CCccccccc
Q 003947 277 TGGQVVYILDQVRALENEMLLRIKQQGLDITPRILIITRLLPDAVGTTCGQRVEKVYGTKYSDILRVPFR-TEEGIVRKW 355 (784)
Q Consensus 277 tGG~~vyv~d~~raLe~eLa~~L~~~GheV~~~i~VvTr~~~~~~g~~~~~~~e~v~~~~~v~IlrvP~~-~~~~~~~~~ 355 (784)
|+|-..-.+ .|+++|+++||+|. +.|... .+......|.....++.. .... ..
T Consensus 8 t~Ghv~P~l--------ala~~L~~rGh~V~----~~~~~~-----------~~~~v~~~Gl~~~~~~~~~~~~~---~~ 61 (139)
T PF03033_consen 8 TRGHVYPFL--------ALARALRRRGHEVR----LATPPD-----------FRERVEAAGLEFVPIPGDSRLPR---SL 61 (139)
T ss_dssp SHHHHHHHH--------HHHHHHHHTT-EEE----EEETGG-----------GHHHHHHTT-EEEESSSCGGGGH---HH
T ss_pred ChhHHHHHH--------HHHHHHhccCCeEE----Eeeccc-----------ceecccccCceEEEecCCcCcCc---cc
Confidence 467666666 67778899999998 777431 111112335677666654 1100 00
Q ss_pred ccccCChhhHH--HHHHHHHHHHHHHc-------C--CCceEEEEcCCChhHHHHHHHHhCCCcEEEEecC
Q 003947 356 ISRFEVWPYLE--TFTEDVATEIIQEL-------Q--CKPDLIIGNYSDGNIVASLLAHKLDVTQCTIAHA 415 (784)
Q Consensus 356 isr~~l~~yl~--~f~~~~~~~i~~~~-------~--~~pDIIh~~~~~~~lva~llar~~gvp~V~t~H~ 415 (784)
-....+..... .....+.+.+.... . ..+|++.++. ....+..++.++++|.+.....
T Consensus 62 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~--~~~~~~~vaE~~~iP~~~~~~~ 130 (139)
T PF03033_consen 62 EPLANLRRLARLIRGLEEAMRILARFRPDLVVAAGGYVADDVIIAAP--LAFAAALVAEQLGIPGVANRLF 130 (139)
T ss_dssp HHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCHCTTTTECCEECHHH--HHTHHHHHHHHHTS-EEEEESS
T ss_pred chhhhhhhHHHHhhhhhHHHHHhhccCcchhhhccCcccchHHHhhh--hcCccceeEhhhCchHHHHhhC
Confidence 00001111111 11222233332221 1 1345544332 3456778899999998876654
No 194
>PF03016 Exostosin: Exostosin family; InterPro: IPR004263 Hereditary multiple exostoses (EXT) is an autosomal dominant disorder that is characterised by the appearance of multiple outgrowths of the long bones (exostoses) at their epiphyses []. Mutations in two homologous genes, EXT1 and EXT2, are responsible for the EXT syndrome. The human and mouse EXT genes have at least two homologs in the invertebrate Caenorhabditis elegans, indicating that they do not function exclusively as regulators of bone growth. EXT1 and EXT2 have both been shown to encode glycosyltransferases involved in the chain elongation step of heparan sulphate biosynthesis [].; GO: 0016020 membrane
Probab=66.91 E-value=13 Score=39.87 Aligned_cols=70 Identities=11% Similarity=0.126 Sum_probs=48.1
Q ss_pred hhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCC-cEEEcCcc--ccccccccCceEEEECCCCHHHHHHHH
Q 003947 630 NGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGL-PTFATCNG--GPAEIIVHGKSGFHIDPYKGDQATGIL 700 (784)
Q Consensus 630 ~~el~~~la~aadvfV~PS~~E~fGltvlEAMA~Gl-PVIaT~~G--G~~EiI~dg~~G~li~p~d~e~lAe~I 700 (784)
..+..+.|++ +..+++|.-...+..-+.|||++|| |||.++.- ...++|.=..-.+.++..+..++-+.|
T Consensus 227 ~~~~~~~l~~-S~FCL~p~G~~~~s~Rl~eal~~GcIPVii~d~~~lPf~~~ldw~~fsv~v~~~~~~~l~~iL 299 (302)
T PF03016_consen 227 PSEYMELLRN-SKFCLCPRGDGPWSRRLYEALAAGCIPVIISDDYVLPFEDVLDWSRFSVRVPEADLPELPEIL 299 (302)
T ss_pred chHHHHhccc-CeEEEECCCCCcccchHHHHhhhceeeEEecCcccCCcccccCHHHEEEEECHHHHHHHHHHH
Confidence 3456677775 7788888776668888999999997 88886422 235566444567778776665555444
No 195
>COG1618 Predicted nucleotide kinase [Nucleotide transport and metabolism]
Probab=65.23 E-value=1.5e+02 Score=29.76 Aligned_cols=37 Identities=16% Similarity=0.442 Sum_probs=25.3
Q ss_pred CCCcceEEEEEccCccccccCccCCCCcccchhhhHHHHHHHHHHHHHHHHHcCCCcc
Q 003947 250 KIPRVFNVVIFTPHGYFAQDNVLGYPDTGGQVVYILDQVRALENEMLLRIKQQGLDIT 307 (784)
Q Consensus 250 ~~p~~mkI~ivs~h~~~~~~~~lg~p~tGG~~vyv~d~~raLe~eLa~~L~~~GheV~ 307 (784)
+++|.|||.+-.+ |.. |-...++ .+++.|.+.|+.|.
T Consensus 1 ~~~~~mki~ITG~------------PGv-GKtTl~~--------ki~e~L~~~g~kvg 37 (179)
T COG1618 1 MIKMAMKIFITGR------------PGV-GKTTLVL--------KIAEKLREKGYKVG 37 (179)
T ss_pred CCCcceEEEEeCC------------CCc-cHHHHHH--------HHHHHHHhcCceee
Confidence 3578899988632 323 3444455 67888899999986
No 196
>PF11997 DUF3492: Domain of unknown function (DUF3492); InterPro: IPR022622 This domain is functionally uncharacterised and is found in bacteria, archaea and eukaryotes. It is typically between 259 to 282 amino acids in length. This region is found N-terminal PF00534 from PFAM. There are two conserved sequence motifs: GGVS and EHGIY.
Probab=64.77 E-value=11 Score=40.67 Aligned_cols=81 Identities=11% Similarity=0.037 Sum_probs=48.2
Q ss_pred CCceEEEEcCCC-hhHHHHHHHHhCCCcEEEEecCCcccCC-C-CCcchhhhcccccc-ccchh--hhhHHHhcccCEEE
Q 003947 382 CKPDLIIGNYSD-GNIVASLLAHKLDVTQCTIAHALELTKY-P-DSDINWKKLDDKYH-FSCQF--TADLFAMNRTDFII 455 (784)
Q Consensus 382 ~~pDIIh~~~~~-~~lva~llar~~gvp~V~t~H~l~~~k~-~-~s~~~~~~~~~~y~-~~~~~--~~e~~a~~~AD~II 455 (784)
.+.||.|+.+.- .+++|.+++.+.|+|++.|=|+.....- . -....|......++ +-.++ ..-+.++..||.|+
T Consensus 171 P~advyHsvstGyAgl~g~~~k~~~g~P~lLTEHGIY~RER~~ei~~a~w~~~~~~~r~~wi~~f~~l~~~~Y~~Ad~I~ 250 (268)
T PF11997_consen 171 PKADVYHSVSTGYAGLLGALAKYRYGRPFLLTEHGIYTREREIEILQADWIWESPYVRDLWIRFFESLSRLAYRAADRIT 250 (268)
T ss_pred CCCCEEecCCccHHHHHHHHHHHHhCCCEEEecCCccHHHHHHHHHhcccccchHHHHHHHHHHHHHHHHHHHHhhCeec
Confidence 456999987654 4889999999999999999999742210 0 00111110000000 00111 12345799999999
Q ss_pred ecChHhH
Q 003947 456 TSTFQEI 462 (784)
Q Consensus 456 t~S~~~~ 462 (784)
+.++.-.
T Consensus 251 ~l~~~n~ 257 (268)
T PF11997_consen 251 PLYEYNR 257 (268)
T ss_pred ccchhhH
Confidence 9886543
No 197
>PF04413 Glycos_transf_N: 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase); InterPro: IPR007507 This is a domain found in proteins that transfer activated sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides. Proteins bearing this domain transfer UDP, ADP, GDP or CMP linked sugars. This region is flanked at the N terminus by a signal peptide and at the C terminus by a glycosyl transferase group 1 domain (IPR001296 from INTERPRO). The eukaryotic glycogen synthases may be distant members of this bacterial family [].; GO: 0005529 sugar binding, 0016740 transferase activity, 0005975 carbohydrate metabolic process; PDB: 2XCI_A 2XCU_B.
Probab=63.54 E-value=33 Score=34.70 Aligned_cols=69 Identities=16% Similarity=0.038 Sum_probs=27.6
Q ss_pred CceEEEEcCCChhHHHHHHHHhCCCcEEEEecCCcccCCCCCcchhhhccccccccchhhhhHHHhcccCEEEecChHhH
Q 003947 383 KPDLIIGNYSDGNIVASLLAHKLDVTQCTIAHALELTKYPDSDINWKKLDDKYHFSCQFTADLFAMNRTDFIITSTFQEI 462 (784)
Q Consensus 383 ~pDIIh~~~~~~~lva~llar~~gvp~V~t~H~l~~~k~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~~~~ 462 (784)
+||+++.-..+.-.--...+++.|+|++..---+... +. ..|.....+ -+..++..|.|.+.|+..+
T Consensus 95 ~P~~~i~~EtElWPnll~~a~~~~ip~~LvNarls~~----s~-------~~~~~~~~~--~r~~l~~f~~i~aqs~~da 161 (186)
T PF04413_consen 95 RPDLLIWVETELWPNLLREAKRRGIPVVLVNARLSER----SF-------RRYRRFPFL--FRPLLSRFDRILAQSEADA 161 (186)
T ss_dssp --SEEEEES----HHHHHH-----S-EEEEEE-------------------------HH--HHHHGGG-SEEEESSHHHH
T ss_pred CCCEEEEEccccCHHHHHHHhhcCCCEEEEeeeeccc----cc-------hhhhhhHHH--HHHHHHhCCEEEECCHHHH
Confidence 7998887555432222335666789977544332111 11 111111111 2346888999999999887
Q ss_pred hh
Q 003947 463 AG 464 (784)
Q Consensus 463 ~~ 464 (784)
+.
T Consensus 162 ~r 163 (186)
T PF04413_consen 162 ER 163 (186)
T ss_dssp HH
T ss_pred HH
Confidence 73
No 198
>COG2327 WcaK Polysaccharide pyruvyl transferase family protein [Cell wall/membrane/envelope biogenesis]
Probab=62.29 E-value=2.8e+02 Score=31.54 Aligned_cols=88 Identities=17% Similarity=0.255 Sum_probs=54.1
Q ss_pred CcEEEccCcCCcCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcCccc-ccccccc-CceEE--EECCC
Q 003947 616 GQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCNGG-PAEIIVH-GKSGF--HIDPY 691 (784)
Q Consensus 616 ~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMA~GlPVIaT~~GG-~~EiI~d-g~~G~--li~p~ 691 (784)
.+|.+.. +.. ..++-..++. +|++|-.-+ -+++=||+.|+|+|+-.+.. ...+.++ |..++ .+.|.
T Consensus 266 ~~i~~~~---d~~-~~~~~~~l~~-~dl~Vg~R~-----HsaI~al~~g~p~i~i~Y~~K~~~l~~~~gl~~~~~~i~~~ 335 (385)
T COG2327 266 AEILVSS---DEY-AEELGGILAA-CDLIVGMRL-----HSAIMALAFGVPAIAIAYDPKVRGLMQDLGLPGFAIDIDPL 335 (385)
T ss_pred cceEeec---chH-HHHHHHHhcc-CceEEeehh-----HHHHHHHhcCCCeEEEeecHHHHHHHHHcCCCcccccCCCC
Confidence 6677764 222 3566778885 888875422 15677999999999964332 2222222 33344 45567
Q ss_pred CHHHHHHHHHHHHHHhcCCHHHHHH
Q 003947 692 KGDQATGILVDFFEKCKVDPGHWDE 716 (784)
Q Consensus 692 d~e~lAe~I~~~l~~ll~dp~~~~~ 716 (784)
|.+.+.+...+++ ..+++.+++
T Consensus 336 ~~~~l~~~~~e~~---~~~~~~~~~ 357 (385)
T COG2327 336 DAEILSAVVLERL---TKLDELRER 357 (385)
T ss_pred chHHHHHHHHHHH---hccHHHHhh
Confidence 7888888888665 356665544
No 199
>PF08660 Alg14: Oligosaccharide biosynthesis protein Alg14 like; InterPro: IPR013969 Alg14 is involved dolichol-linked oligosaccharide biosynthesis and anchors the catalytic subunit Alg13 to the ER membrane [].
Probab=61.48 E-value=19 Score=36.05 Aligned_cols=64 Identities=20% Similarity=0.150 Sum_probs=42.7
Q ss_pred CCCceEEEEcCCChhHHHHHHHHhC------CCcEEEEecCCcccCCCCCcchhhhccccccccchhhhhHHHhcccCEE
Q 003947 381 QCKPDLIIGNYSDGNIVASLLAHKL------DVTQCTIAHALELTKYPDSDINWKKLDDKYHFSCQFTADLFAMNRTDFI 454 (784)
Q Consensus 381 ~~~pDIIh~~~~~~~lva~llar~~------gvp~V~t~H~l~~~k~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~I 454 (784)
+.+||+|++|.+.......++++.+ +.++|++= ++...+ ..+ ..-++.+.-||..
T Consensus 90 r~rPdvii~nGpg~~vp~~~~~~l~~~~~~~~~kiIyIE-S~aRv~---------------~lS---lTGklly~~aD~f 150 (170)
T PF08660_consen 90 RERPDVIISNGPGTCVPVCLAAKLLRLLGLRGSKIIYIE-SFARVK---------------TLS---LTGKLLYPFADRF 150 (170)
T ss_pred HhCCCEEEEcCCceeeHHHHHHHHHHHhhccCCcEEEEE-eeeecC---------------CCc---hHHHHHHHhCCEE
Confidence 4489999999999888888888888 88877532 111111 000 1123466779999
Q ss_pred EecChHhHh
Q 003947 455 ITSTFQEIA 463 (784)
Q Consensus 455 It~S~~~~~ 463 (784)
++.-++.++
T Consensus 151 ~VQW~~l~~ 159 (170)
T PF08660_consen 151 IVQWEELAE 159 (170)
T ss_pred EEcCHHHHh
Confidence 998887765
No 200
>PLN02534 UDP-glycosyltransferase
Probab=61.29 E-value=3.3e+02 Score=32.03 Aligned_cols=44 Identities=9% Similarity=0.026 Sum_probs=29.0
Q ss_pred cEEEccCcCCcCChhHHHHHHHccccE--EEeCCCCCCCcHHHHHHHHcCCcEEEcCc
Q 003947 617 QFRWISSQMNRVRNGELYRYICDTKGA--FVQPALYEAFGLTVVEAMTCGLPTFATCN 672 (784)
Q Consensus 617 ~V~flG~~~~~v~~~el~~~la~aadv--fV~PS~~E~fGltvlEAMA~GlPVIaT~~ 672 (784)
++.+.| +++..++.. ..++ ||.- +=.++++||+++|+|+|+-..
T Consensus 345 g~~v~~----w~pq~~iL~----h~~v~~fvtH----~G~ns~~ea~~~GvP~v~~P~ 390 (491)
T PLN02534 345 GLLIKG----WAPQVLILS----HPAIGGFLTH----CGWNSTIEGICSGVPMITWPL 390 (491)
T ss_pred CeeccC----CCCHHHHhc----CCccceEEec----CccHHHHHHHHcCCCEEeccc
Confidence 455555 666656554 2444 6643 224589999999999999744
No 201
>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain. This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.
Probab=60.75 E-value=2e+02 Score=29.47 Aligned_cols=172 Identities=10% Similarity=0.023 Sum_probs=84.4
Q ss_pred HHHHHHHhHccCCCeEEEEEeCCCCCCcccHHHHHHHHHHHHHHHhcCCCCcEEEccCcCCcCChhHHHHHHHccccEEE
Q 003947 566 LVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYGLIDTYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFV 645 (784)
Q Consensus 566 LieA~~~l~~~~~~v~LvIVG~g~~~~s~d~ee~~~~~~l~~li~~l~L~~~V~flG~~~~~v~~~el~~~la~aadvfV 645 (784)
....+..+.+ ..+++.|+..... +.+.+++++ ++|.|... ... ...+.+ +++++
T Consensus 21 a~rk~~~Ll~--~ga~VtVvsp~~~------------~~l~~l~~~----~~i~~~~~---~~~----~~dl~~-~~lVi 74 (205)
T TIGR01470 21 ALRKARLLLK--AGAQLRVIAEELE------------SELTLLAEQ----GGITWLAR---CFD----ADILEG-AFLVI 74 (205)
T ss_pred HHHHHHHHHH--CCCEEEEEcCCCC------------HHHHHHHHc----CCEEEEeC---CCC----HHHhCC-cEEEE
Confidence 3344445544 3466777765433 233344432 46888751 111 223454 66655
Q ss_pred eCCCC-CCCcHHHHHHHHcCCcEEEcCccccccc-----cccCceEEEE-CCCCHHHHHHHHHHHHHHhcCC-HHHHHHH
Q 003947 646 QPALY-EAFGLTVVEAMTCGLPTFATCNGGPAEI-----IVHGKSGFHI-DPYKGDQATGILVDFFEKCKVD-PGHWDEI 717 (784)
Q Consensus 646 ~PS~~-E~fGltvlEAMA~GlPVIaT~~GG~~Ei-----I~dg~~G~li-~p~d~e~lAe~I~~~l~~ll~d-p~~~~~m 717 (784)
..+-. |----...+|-..|+||-+.+.....++ +..|.--+-+ ..+....+|..|.+-++.++.+ -+.+.++
T Consensus 75 ~at~d~~ln~~i~~~a~~~~ilvn~~d~~e~~~f~~pa~~~~g~l~iaisT~G~sP~la~~lr~~ie~~l~~~~~~~~~~ 154 (205)
T TIGR01470 75 AATDDEELNRRVAHAARARGVPVNVVDDPELCSFIFPSIVDRSPVVVAISSGGAAPVLARLLRERIETLLPPSLGDLATL 154 (205)
T ss_pred ECCCCHHHHHHHHHHHHHcCCEEEECCCcccCeEEEeeEEEcCCEEEEEECCCCCcHHHHHHHHHHHHhcchhHHHHHHH
Confidence 44332 2333345677889999977765554333 3344222222 2334567888888877776642 2334455
Q ss_pred HHHHHHHHHHhCCHHHHHHHH-HHHHHHhhhhhhhhhhhHHHHhhHHH
Q 003947 718 SQGGLKRIQEKYTWKIYSERL-LNLSGVYGFWKHLSKLDCREKNRYLE 764 (784)
Q Consensus 718 ~~~a~~~v~~~ytw~~~a~~l-l~ly~~~~~~~~~~~~~~~~~~~y~~ 764 (784)
....|..+.+...-..--+++ ..++ .=.++..+-+....+..++++
T Consensus 155 ~~~~R~~~k~~~~~~~~r~~~~~~~~-~~~~~~~~~~g~~~~~~~~~~ 201 (205)
T TIGR01470 155 AATWRDAVKKRLPNGAARRRFWEKFF-DGAFAERVLAGREEQAERVLA 201 (205)
T ss_pred HHHHHHHHHhhCCCHHHHHHHHHHHh-ccHHHHHHHcCCHHHHHHHHH
Confidence 555666665443322111111 1111 113444444545555555554
No 202
>COG2910 Putative NADH-flavin reductase [General function prediction only]
Probab=59.43 E-value=8.3 Score=39.07 Aligned_cols=33 Identities=21% Similarity=0.369 Sum_probs=26.9
Q ss_pred eEEEEEccCccccccCccCCCCcccchhhhHHHHHHHHHHHHHHHHHcCCCcccceEEEecC
Q 003947 255 FNVVIFTPHGYFAQDNVLGYPDTGGQVVYILDQVRALENEMLLRIKQQGLDITPRILIITRL 316 (784)
Q Consensus 255 mkI~ivs~h~~~~~~~~lg~p~tGG~~vyv~d~~raLe~eLa~~L~~~GheV~~~i~VvTr~ 316 (784)
|||+||+..|+.| ++++++..++||+|+ .++|.
T Consensus 1 mKIaiIgAsG~~G-------------------------s~i~~EA~~RGHeVT----AivRn 33 (211)
T COG2910 1 MKIAIIGASGKAG-------------------------SRILKEALKRGHEVT----AIVRN 33 (211)
T ss_pred CeEEEEecCchhH-------------------------HHHHHHHHhCCCeeE----EEEeC
Confidence 7999998887743 156778899999999 88876
No 203
>KOG1192 consensus UDP-glucuronosyl and UDP-glucosyl transferase [Carbohydrate transport and metabolism; Energy production and conversion]
Probab=58.46 E-value=1.7e+02 Score=33.76 Aligned_cols=143 Identities=10% Similarity=0.059 Sum_probs=73.9
Q ss_pred CCCEEEEEecccC-----CCChHHHHHHHHHhHccCCCeEEEEEeCCCCCCcccHHHHHHHHHHHHHHHhcC--CCCcEE
Q 003947 547 SKPILFTMARLDR-----VKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYGLIDTYK--LNGQFR 619 (784)
Q Consensus 547 ~k~iIl~vGRL~~-----~Kgi~~LieA~~~l~~~~~~v~LvIVG~g~~~~s~d~ee~~~~~~l~~li~~l~--L~~~V~ 619 (784)
+..++++.|.+.. .+-...++.+++++ +++.|+++=..... . .+.+... -.++|.
T Consensus 277 ~~vvyvSfGS~~~~~~lp~~~~~~l~~~l~~~----~~~~FiW~~~~~~~-----------~---~~~~~~~~~~~~nV~ 338 (496)
T KOG1192|consen 277 HSVVYISFGSMVNSADLPEEQKKELAKALESL----QGVTFLWKYRPDDS-----------I---YFPEGLPNRGRGNVV 338 (496)
T ss_pred CCeEEEECCcccccccCCHHHHHHHHHHHHhC----CCceEEEEecCCcc-----------h---hhhhcCCCCCcCceE
Confidence 3566777787753 33344455555544 46676666554321 0 0222221 145677
Q ss_pred EccCcCCcCChhHHHHHHHc-cccEEEeCCCCCCCcHHHHHHHHcCCcEEEc----Ccccccccc-ccCceEEEECCCCH
Q 003947 620 WISSQMNRVRNGELYRYICD-TKGAFVQPALYEAFGLTVVEAMTCGLPTFAT----CNGGPAEII-VHGKSGFHIDPYKG 693 (784)
Q Consensus 620 flG~~~~~v~~~el~~~la~-aadvfV~PS~~E~fGltvlEAMA~GlPVIaT----~~GG~~EiI-~dg~~G~li~p~d~ 693 (784)
..+ ++|..++. +.. +.++||. .-|++ +++||..+|+|+++. |..-.+..+ .+|..|... ..+.
T Consensus 339 ~~~----W~PQ~~ll--l~H~~v~~FvT---HgG~n-St~E~~~~GvP~v~~Plf~DQ~~Na~~i~~~g~~~v~~-~~~~ 407 (496)
T KOG1192|consen 339 LSK----WAPQNDLL--LDHPAVGGFVT---HGGWN-STLESIYSGVPMVCVPLFGDQPLNARLLVRHGGGGVLD-KRDL 407 (496)
T ss_pred Eec----CCCcHHHh--cCCCcCcEEEE---CCccc-HHHHHHhcCCceecCCccccchhHHHHHHhCCCEEEEe-hhhc
Confidence 766 66666655 222 1344553 24555 459999999999964 323334444 345444443 3322
Q ss_pred H--HHHHHHHHHHHHhcCCHHHHHHHHHHHH
Q 003947 694 D--QATGILVDFFEKCKVDPGHWDEISQGGL 722 (784)
Q Consensus 694 e--~lAe~I~~~l~~ll~dp~~~~~m~~~a~ 722 (784)
. .+.+++. .++.++++.+...+-+.
T Consensus 408 ~~~~~~~~~~----~il~~~~y~~~~~~l~~ 434 (496)
T KOG1192|consen 408 VSEELLEAIK----EILENEEYKEAAKRLSE 434 (496)
T ss_pred CcHHHHHHHH----HHHcChHHHHHHHHHHH
Confidence 1 2455554 44567776655444333
No 204
>PRK04020 rps2P 30S ribosomal protein S2; Provisional
Probab=55.30 E-value=88 Score=32.32 Aligned_cols=111 Identities=17% Similarity=0.124 Sum_probs=61.7
Q ss_pred CCChHHHHHHHHHhHccCCCeEEEEEeCCCCCCcccHHHHHHHHHHHHHHHhcCCCC-cEEEccCcCCcCChhHHHHHHH
Q 003947 560 VKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYGLIDTYKLNG-QFRWISSQMNRVRNGELYRYIC 638 (784)
Q Consensus 560 ~Kgi~~LieA~~~l~~~~~~v~LvIVG~g~~~~s~d~ee~~~~~~l~~li~~l~L~~-~V~flG~~~~~v~~~el~~~la 638 (784)
.|=+..|..|+.-+... ..-++++||..+. ..+.+++.++..|..- .=+|+|- -..+..+..++-
T Consensus 49 ~kT~~~L~~A~~~i~~~-~~~~ILfVgTk~~----------~~~~v~k~A~~~g~~~v~~RWlgG---~LTN~~~~~~~~ 114 (204)
T PRK04020 49 RKTDERIRIAAKFLSRY-EPEKILVVSSRQY----------GQKPVQKFAEVVGAKAITGRFIPG---TLTNPSLKGYIE 114 (204)
T ss_pred HHHHHHHHHHHHHHHHh-cCCeEEEEeCCHH----------HHHHHHHHHHHhCCeeecCccCCC---cCcCcchhccCC
Confidence 44455566666555543 3457888998743 1234555555555321 1178872 222222323222
Q ss_pred ccccEEEeCCCCCCCcHHHHHHHHcCCcEEEc-CccccccccccCceEEEECCCC
Q 003947 639 DTKGAFVQPALYEAFGLTVVEAMTCGLPTFAT-CNGGPAEIIVHGKSGFHIDPYK 692 (784)
Q Consensus 639 ~aadvfV~PS~~E~fGltvlEAMA~GlPVIaT-~~GG~~EiI~dg~~G~li~p~d 692 (784)
=|++++..-. .=..++.||.-.|.|||+- |....++.| -+.||.+|
T Consensus 115 --Pdliiv~dp~-~~~~AI~EA~kl~IP~IaivDTn~dp~~V-----dypIP~Nd 161 (204)
T PRK04020 115 --PDVVVVTDPR-GDAQAVKEAIEVGIPVVALCDTDNLTSNV-----DLVIPTNN 161 (204)
T ss_pred --CCEEEEECCc-ccHHHHHHHHHhCCCEEEEEeCCCCcccC-----ceeECCCC
Confidence 2333333221 1257899999999999994 555566665 46677665
No 205
>PLN02207 UDP-glycosyltransferase
Probab=55.00 E-value=4e+02 Score=31.10 Aligned_cols=79 Identities=15% Similarity=0.123 Sum_probs=46.6
Q ss_pred CcEEEccCcCCcCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcCccc----ccccccc-CceEEEEC-
Q 003947 616 GQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCNGG----PAEIIVH-GKSGFHID- 689 (784)
Q Consensus 616 ~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMA~GlPVIaT~~GG----~~EiI~d-g~~G~li~- 689 (784)
++....+ +.+..++...= +.++||.= -|+ ++++||+.+|+|+|+-...+ ....+.+ -..|+-+.
T Consensus 332 ~~g~i~~----W~PQ~~IL~H~--~vg~FvTH---~Gw-nS~~Eai~~GVP~l~~P~~~DQ~~Na~~~~~~~gvGv~~~~ 401 (468)
T PLN02207 332 GRGMICG----WSPQVEILAHK--AVGGFVSH---CGW-NSIVESLWFGVPIVTWPMYAEQQLNAFLMVKELKLAVELKL 401 (468)
T ss_pred CCeEEEE----eCCHHHHhccc--ccceeeec---Ccc-ccHHHHHHcCCCEEecCccccchhhHHHHHHHhCceEEEec
Confidence 4444445 66666766631 24456643 233 47899999999999964333 3443333 34565331
Q ss_pred --------CCCHHHHHHHHHHHH
Q 003947 690 --------PYKGDQATGILVDFF 704 (784)
Q Consensus 690 --------p~d~e~lAe~I~~~l 704 (784)
.-+.++++++|.+++
T Consensus 402 ~~~~~~~~~v~~e~i~~av~~vm 424 (468)
T PLN02207 402 DYRVHSDEIVNANEIETAIRCVM 424 (468)
T ss_pred ccccccCCcccHHHHHHHHHHHH
Confidence 125678888887665
No 206
>PF05686 Glyco_transf_90: Glycosyl transferase family 90; InterPro: IPR006598 Cryptococcus neoformans is a pathogenic fungus which most commonly affects the central nervous system and causes fatal meningoencephalitis primarily in patients with AIDS. This fungus produces a thick extracellular polysaccharide capsule which is well recognised as a virulence factor. CAP10 is required for capsule formation and virulence [].
Probab=54.17 E-value=46 Score=37.92 Aligned_cols=82 Identities=9% Similarity=-0.078 Sum_probs=55.7
Q ss_pred HHcCCcEEEcCcc---ccccccccCceEEEECC-CCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHH
Q 003947 661 MTCGLPTFATCNG---GPAEIIVHGKSGFHIDP-YKGDQATGILVDFFEKCKVDPGHWDEISQGGLKRIQEKYTWKIYSE 736 (784)
Q Consensus 661 MA~GlPVIaT~~G---G~~EiI~dg~~G~li~p-~d~e~lAe~I~~~l~~ll~dp~~~~~m~~~a~~~v~~~ytw~~~a~ 736 (784)
|+||-.|+..... -..+.+..+++=+-|.. +|..++.++|. .+.+|++..++|+++|.+.+.+..+.+.+..
T Consensus 234 L~c~SvVl~~~~~~~e~f~~~L~P~vHYVPV~~~~d~sdL~~~v~----w~~~~~~~A~~IA~~g~~f~~~~L~~~~~~~ 309 (395)
T PF05686_consen 234 LACNSVVLKVKSPYYEFFYRALKPWVHYVPVKRDDDLSDLEEKVE----WLNAHDDEAQRIAENGQRFAREYLTMEDVYC 309 (395)
T ss_pred HcCCceEEEeCCcHHHHHHhhhcccccEEEeccccchhhHHHHhh----hcccChHHHHHHHHHHHHHHHHHhhhhHHHH
Confidence 6666666653211 12233334444444554 36677777774 6778999999999999999999999888887
Q ss_pred HHHHHHHHhh
Q 003947 737 RLLNLSGVYG 746 (784)
Q Consensus 737 ~ll~ly~~~~ 746 (784)
-+..+...|+
T Consensus 310 Y~~~LL~eYa 319 (395)
T PF05686_consen 310 YWRRLLLEYA 319 (395)
T ss_pred HHHHHHHHHH
Confidence 7777776654
No 207
>KOG1021 consensus Acetylglucosaminyltransferase EXT1/exostosin 1 [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis; Extracellular structures]
Probab=53.54 E-value=1.1e+02 Score=35.55 Aligned_cols=96 Identities=6% Similarity=0.072 Sum_probs=57.7
Q ss_pred hHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCC-cEEEcCcc--ccccccccCceEEEECCCCHHHHHHHHHHHHHHh
Q 003947 631 GELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGL-PTFATCNG--GPAEIIVHGKSGFHIDPYKGDQATGILVDFFEKC 707 (784)
Q Consensus 631 ~el~~~la~aadvfV~PS~~E~fGltvlEAMA~Gl-PVIaT~~G--G~~EiI~dg~~G~li~p~d~e~lAe~I~~~l~~l 707 (784)
....+.+++ +-.+++|+-.+...-.++||+.+|| |||.++.- ...+.+.-..-+++++. +++-+.|.+.+..
T Consensus 335 ~~y~~~m~~-S~FCL~p~Gd~~ts~R~fdai~~gCvPViisd~~~lpf~~~~d~~~fSV~v~~---~~v~~~~~~iL~~- 409 (464)
T KOG1021|consen 335 LNYMEGMQD-SKFCLCPPGDTPTSPRLFDAIVSGCVPVIISDGIQLPFGDVLDWTEFSVFVPE---KDVPELIKNILLS- 409 (464)
T ss_pred chHHHHhhc-CeEEECCCCCCcccHhHHHHHHhCCccEEEcCCcccCcCCCccceEEEEEEEH---HHhhhHHHHHHHh-
Confidence 356677776 7799999988888889999999998 99998552 23444433344566642 3333333443321
Q ss_pred cCCHHHHHHHHHHHHHHHHHhCCHH
Q 003947 708 KVDPGHWDEISQGGLKRIQEKYTWK 732 (784)
Q Consensus 708 l~dp~~~~~m~~~a~~~v~~~ytw~ 732 (784)
.......+|.++-...+.+.+.|.
T Consensus 410 -i~~~~~~~m~~~v~~~v~r~~~~~ 433 (464)
T KOG1021|consen 410 -IPEEEVLRMRENVIRLVPRHFLKK 433 (464)
T ss_pred -cCHHHHHHHHHHHHHHHHhhEEeC
Confidence 122333555555554444555544
No 208
>PRK00676 hemA glutamyl-tRNA reductase; Validated
Probab=52.74 E-value=3.7e+02 Score=30.06 Aligned_cols=125 Identities=9% Similarity=-0.047 Sum_probs=69.0
Q ss_pred CCeEEEEEeCCCCCCcccHHHHHHHHHHHHHHHhcCCCCcEEEccCcCCcCChhHHH----HHHHccccEEEeCC--CCC
Q 003947 578 ELVNLVVVGGDRRKESKDLEEQAEMKKMYGLIDTYKLNGQFRWISSQMNRVRNGELY----RYICDTKGAFVQPA--LYE 651 (784)
Q Consensus 578 ~~v~LvIVG~g~~~~s~d~ee~~~~~~l~~li~~l~L~~~V~flG~~~~~v~~~el~----~~la~aadvfV~PS--~~E 651 (784)
.+.+++|+|.|. .-+...+...+.|. .+|.+...+....+.++++ .+... +|+++..| ..-
T Consensus 173 ~~k~vLvIGaGe-----------m~~l~a~~L~~~g~-~~i~v~nRt~~~~~~~~~~~~~~~~~~~-~DvVIs~t~~Tas 239 (338)
T PRK00676 173 KKASLLFIGYSE-----------INRKVAYYLQRQGY-SRITFCSRQQLTLPYRTVVREELSFQDP-YDVIFFGSSESAY 239 (338)
T ss_pred cCCEEEEEcccH-----------HHHHHHHHHHHcCC-CEEEEEcCCccccchhhhhhhhhhcccC-CCEEEEcCCcCCC
Confidence 467999999982 12222233334454 4577776554455566655 55664 89999752 234
Q ss_pred CCcHHHHHHHHcCCcEEEcCccccccccc--cCceEEEECCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHH
Q 003947 652 AFGLTVVEAMTCGLPTFATCNGGPAEIIV--HGKSGFHIDPYKGDQATGILVDFFEKCKVDPGHWDEISQGGLKRI 725 (784)
Q Consensus 652 ~fGltvlEAMA~GlPVIaT~~GG~~EiI~--dg~~G~li~p~d~e~lAe~I~~~l~~ll~dp~~~~~m~~~a~~~v 725 (784)
+.|....|.+..-.+-+.-|..-|+++=. ...+-.++ |.+++.+.+.+ |-..|++....+...+
T Consensus 240 ~~p~i~~~~~~~~~~r~~iDLAvPRdId~v~~~~~v~Ly---~iDdL~~i~~~-------n~~~R~~~~~~ae~iI 305 (338)
T PRK00676 240 AFPHLSWESLADIPDRIVFDFNVPRTFPWSETPFPHRYL---DMDFISEWVQK-------HLQCRKEVNNKHKLSL 305 (338)
T ss_pred CCceeeHHHHhhccCcEEEEecCCCCCccccccCCcEEE---EhHHHHHHHHH-------HHHHHHHHHHHHHHHH
Confidence 45555556555322246667777777631 12223344 66666665542 4444555555555554
No 209
>PRK13932 stationary phase survival protein SurE; Provisional
Probab=51.44 E-value=2.7e+02 Score=29.91 Aligned_cols=39 Identities=15% Similarity=0.304 Sum_probs=26.9
Q ss_pred CcceEEEEEccCccccccCccCCCCcccchhhhHHHHHHHHHHHHHHHHHcCCCcccceEEEecCC
Q 003947 252 PRVFNVVIFTPHGYFAQDNVLGYPDTGGQVVYILDQVRALENEMLLRIKQQGLDITPRILIITRLL 317 (784)
Q Consensus 252 p~~mkI~ivs~h~~~~~~~~lg~p~tGG~~vyv~d~~raLe~eLa~~L~~~GheV~~~i~VvTr~~ 317 (784)
.|.|||++....|+..+ | +. .|++.|++.| +|. |+++..
T Consensus 3 ~~~M~ILltNDDGi~a~----------G----i~--------aL~~~l~~~g-~V~----VvAP~~ 41 (257)
T PRK13932 3 DKKPHILVCNDDGIEGE----------G----IH--------VLAASMKKIG-RVT----VVAPAE 41 (257)
T ss_pred CCCCEEEEECCCCCCCH----------H----HH--------HHHHHHHhCC-CEE----EEcCCC
Confidence 46689999998888432 2 44 3455567778 787 888764
No 210
>COG1647 Esterase/lipase [General function prediction only]
Probab=48.81 E-value=66 Score=33.70 Aligned_cols=43 Identities=16% Similarity=0.097 Sum_probs=29.7
Q ss_pred HHHHHHHHHcCCCceEEEEcCCChhHHHHHHHHhCCCcEEEEecC
Q 003947 371 DVATEIIQELQCKPDLIIGNYSDGNIVASLLAHKLDVTQCTIAHA 415 (784)
Q Consensus 371 ~~~~~i~~~~~~~pDIIh~~~~~~~lva~llar~~gvp~V~t~H~ 415 (784)
+..+.+.. .+-..|..+--+.|++.+..++....++=++.+-+
T Consensus 74 d~Y~~L~~--~gy~eI~v~GlSmGGv~alkla~~~p~K~iv~m~a 116 (243)
T COG1647 74 DGYRDLKE--AGYDEIAVVGLSMGGVFALKLAYHYPPKKIVPMCA 116 (243)
T ss_pred HHHHHHHH--cCCCeEEEEeecchhHHHHHHHhhCCccceeeecC
Confidence 34444443 44566777888999999999999887665555543
No 211
>smart00672 CAP10 Putative lipopolysaccharide-modifying enzyme.
Probab=48.66 E-value=74 Score=33.98 Aligned_cols=48 Identities=15% Similarity=0.121 Sum_probs=40.1
Q ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHhh
Q 003947 695 QATGILVDFFEKCKVDPGHWDEISQGGLKRIQEKYTWKIYSERLLNLSGVYG 746 (784)
Q Consensus 695 ~lAe~I~~~l~~ll~dp~~~~~m~~~a~~~v~~~ytw~~~a~~ll~ly~~~~ 746 (784)
++.++|. .+.++|+..++|+++|++.+.+..+.+.+..-+..+...|+
T Consensus 203 ~l~~~i~----~~~~~~~~a~~Ia~~~~~~~~~~L~~~~~~~Y~~~ll~eya 250 (256)
T smart00672 203 ELKEAVD----WGNEHDKKAQEIGKRGSEFIQQNLSMEDVYDYMFHLLQEYA 250 (256)
T ss_pred hHHHHHH----HHHhCHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHH
Confidence 3777775 55689999999999999999888999998888888877654
No 212
>PF09752 DUF2048: Uncharacterized conserved protein (DUF2048); InterPro: IPR019149 This family of proteins has no known function.
Probab=47.75 E-value=2.1e+02 Score=32.10 Aligned_cols=34 Identities=18% Similarity=0.077 Sum_probs=24.0
Q ss_pred CCCceEEEEcCCChhHHHHHHHHhCCCcEEEEec
Q 003947 381 QCKPDLIIGNYSDGNIVASLLAHKLDVTQCTIAH 414 (784)
Q Consensus 381 ~~~pDIIh~~~~~~~lva~llar~~gvp~V~t~H 414 (784)
++-.-+..+-.+.|+..|.+.+.....|+....+
T Consensus 172 ~G~~~~g~~G~SmGG~~A~laa~~~p~pv~~vp~ 205 (348)
T PF09752_consen 172 EGYGPLGLTGISMGGHMAALAASNWPRPVALVPC 205 (348)
T ss_pred cCCCceEEEEechhHhhHHhhhhcCCCceeEEEe
Confidence 3445667777788888888888877767654444
No 213
>PRK02122 glucosamine-6-phosphate deaminase-like protein; Validated
Probab=46.63 E-value=45 Score=40.51 Aligned_cols=106 Identities=24% Similarity=0.358 Sum_probs=53.8
Q ss_pred HHHHHHHHHhhcCCC-------CCChHHHHHHHHhcCcccccCCchHHHHHHHHHHHHhhcC-----CCcchHhHHhcCC
Q 003947 184 SSLRMAEKYLSMLAP-------DTSYAEFEQKFQEIGLERGWGDNAEHVLGMIQLLLDLLQA-----PESSTLETFLGKI 251 (784)
Q Consensus 184 ~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-----p~~~~~~~~~~~~ 251 (784)
+-.++|.-.|+..-. +.-|.+ +.|.+|==+-||--++. .+.++-|..-+.- |+....-.-=..-
T Consensus 291 ~~~~~~~~~l~~~~~k~~l~l~~~d~~~--~~~~~l~~~~g~~~~~~--~~~f~~~~~~i~~~p~g~~~~~~~~~~~~~~ 366 (652)
T PRK02122 291 KLIRRAVVWLCQKLGKPILKLTDKDYNE--NGLSDLLAQYGSAYNVN--IKVFNDLQHTITGWPGGKPNADDTNRPERAL 366 (652)
T ss_pred HHHHHHHHHHHHHhCCCcccCchhhhhh--cCHHHHHHHhCcHHHHH--HHHHHHHHHHhcCCCCCCCCcccccCCcccc
Confidence 356778777765432 122222 22444333446633332 3455555555532 1111100000123
Q ss_pred CcceEEEEEccCccccccCccCCCCcccchhhhHHHHHHHHHHHHHHHHHcCCCcccceEEEecC
Q 003947 252 PRVFNVVIFTPHGYFAQDNVLGYPDTGGQVVYILDQVRALENEMLLRIKQQGLDITPRILIITRL 316 (784)
Q Consensus 252 p~~mkI~ivs~h~~~~~~~~lg~p~tGG~~vyv~d~~raLe~eLa~~L~~~GheV~~~i~VvTr~ 316 (784)
|..+||+++|||.- ..++| .||. ..+|+++||+|+ |+++|..
T Consensus 367 ~~~~rvLv~spHPD---Devi~---~GGT---------------larl~~~G~~V~--vv~~TsG 408 (652)
T PRK02122 367 PYPKRVIIFSPHPD---DDVIS---MGGT---------------FRRLVEQGHDVH--VAYQTSG 408 (652)
T ss_pred cCCceEEEEEeCCC---chHhh---hHHH---------------HHHHHHCCCcEE--EEEecCC
Confidence 55689999999963 33453 3553 235789999998 4445544
No 214
>TIGR00715 precor6x_red precorrin-6x reductase. This enzyme was found to be a monomer by gel filtration.
Probab=45.58 E-value=74 Score=34.03 Aligned_cols=100 Identities=12% Similarity=-0.003 Sum_probs=52.5
Q ss_pred CCCEEEEEecccCCCChHHHHHHHHHhHccCCCeEEEEEeCCCCCCcccHHHHHHHHHHHHHHHhcCCC-CcE-EEccCc
Q 003947 547 SKPILFTMARLDRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYGLIDTYKLN-GQF-RWISSQ 624 (784)
Q Consensus 547 ~k~iIl~vGRL~~~Kgi~~LieA~~~l~~~~~~v~LvIVG~g~~~~s~d~ee~~~~~~l~~li~~l~L~-~~V-~flG~~ 624 (784)
++.++++.| .|++..+.... . ...+.+-+. |. ....+.+.++|++ .++ -.-|
T Consensus 129 ~~~i~lttG----~k~l~~f~~~~---~--~~~~~~RvL---P~------------~~~l~~~~~~G~~~~~iia~~g-- 182 (256)
T TIGR00715 129 GKRVFLTAG----ASWLSHFSLSQ---D--EAVVFVRVL---PY------------PQALAQALKLGFPSDRIIAMRG-- 182 (256)
T ss_pred CCcEEEecC----cchHHHHhhcc---C--CceEEEEEC---CC------------chhhHHHHHcCCChhcEEEEeC--
Confidence 357888888 57777765421 1 122333333 22 1122356677774 333 3334
Q ss_pred CCcCChhHHHHHHHc-cccEEEeCCCCC--CCcHHHHHHHHcCCcEEEcCccc
Q 003947 625 MNRVRNGELYRYICD-TKGAFVQPALYE--AFGLTVVEAMTCGLPTFATCNGG 674 (784)
Q Consensus 625 ~~~v~~~el~~~la~-aadvfV~PS~~E--~fGltvlEAMA~GlPVIaT~~GG 674 (784)
+.+.+.=..++.. ..|++|.=-..+ ++--++--|+.+|+|||.-+-+-
T Consensus 183 --Pfs~e~n~al~~~~~i~~lVtK~SG~~Gg~~eKi~AA~~lgi~vivI~RP~ 233 (256)
T TIGR00715 183 --PFSEELEKALLREYRIDAVVTKASGEQGGELEKVKAAEALGINVIRIARPQ 233 (256)
T ss_pred --CCCHHHHHHHHHHcCCCEEEEcCCCCccchHHHHHHHHHcCCcEEEEeCCC
Confidence 2232222233321 255666533222 45567888999999999976653
No 215
>PF04230 PS_pyruv_trans: Polysaccharide pyruvyl transferase; InterPro: IPR007345 Pyruvyl-transferases are involved in peptidoglycan-associated polymer biosynthesis. CsaB in Bacillus anthracis is necessary for the non-covalent anchoring of proteins containing an SLH (S-layer homology) domain to peptidoglycan-associated pyruvylated polysaccharides. WcaK and AmsJ are involved in the biosynthesis of colanic acid in Escherichia coli and of amylovoran in Erwinia amylovora [, ].
Probab=44.74 E-value=3.5e+02 Score=27.45 Aligned_cols=95 Identities=15% Similarity=0.119 Sum_probs=53.2
Q ss_pred CCChHHHHHHHHHhHccCCCeEEEEEeCCCCCCcccHHHHHHHHHHHHHHHh-cCCCCcEEEccCcCCcCChhHHHHHHH
Q 003947 560 VKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYGLIDT-YKLNGQFRWISSQMNRVRNGELYRYIC 638 (784)
Q Consensus 560 ~Kgi~~LieA~~~l~~~~~~v~LvIVG~g~~~~s~d~ee~~~~~~l~~li~~-l~L~~~V~flG~~~~~v~~~el~~~la 638 (784)
..-.+.+.+.+..+.+......++........ + .......... .....++..+. ...+..++..+++
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~----~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~ 256 (286)
T PF04230_consen 189 EEYIEEIAELIQRLLDKGYKIVLLPFSPSDDD-----E----DDDDFNEIDIKAEKFFNVIIID---YSLSPDELLELIS 256 (286)
T ss_pred hhHHHHHHHHHHHhhcccceeEEEEeeeccch-----h----hHHHHHhhhhhcccccceeEec---CCCCHHHHHHHHh
Confidence 34445556666666654444555555544331 0 0111111110 22233444443 2566889999999
Q ss_pred ccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcCc
Q 003947 639 DTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCN 672 (784)
Q Consensus 639 ~aadvfV~PS~~E~fGltvlEAMA~GlPVIaT~~ 672 (784)
. ++++|...++ ..+=|+++|+|+|+-..
T Consensus 257 ~-~~~~Is~RlH-----~~I~a~~~g~P~i~i~y 284 (286)
T PF04230_consen 257 Q-ADLVISMRLH-----GAILALSLGVPVIAISY 284 (286)
T ss_pred c-CCEEEecCCH-----HHHHHHHcCCCEEEEec
Confidence 5 9999876543 45679999999998543
No 216
>PF15024 Glyco_transf_18: Glycosyltransferase family 18
Probab=44.21 E-value=2.5e+02 Score=33.39 Aligned_cols=153 Identities=13% Similarity=0.127 Sum_probs=96.1
Q ss_pred CCEEEEEeccc-CCCChHHHHHHHHHhHccCCCeEEEEEeCCCCCCcccHHHHHHHHHHHHHHHhcCCCCcEEEccCcCC
Q 003947 548 KPILFTMARLD-RVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYGLIDTYKLNGQFRWISSQMN 626 (784)
Q Consensus 548 k~iIl~vGRL~-~~Kgi~~LieA~~~l~~~~~~v~LvIVG~g~~~~s~d~ee~~~~~~l~~li~~l~L~~~V~flG~~~~ 626 (784)
++.-+..|.-. -.||-+..++.+.+.- .++-.|.+... ....++.-|+=+|
T Consensus 277 ~~~AlVyGK~~~~w~~k~~~l~~l~~~~----eih~tV~~~~~--------------------~~~~~P~~V~NHG---- 328 (559)
T PF15024_consen 277 KNQALVYGKERYMWKGKEKYLDVLHKYM----EIHGTVYDEPQ--------------------RPPNVPSFVKNHG---- 328 (559)
T ss_pred cceeEEEccchhhhcCcHHHHHHHHhhc----EEEEEeccCCC--------------------CCcccchhhhhcC----
Confidence 34455555544 3677788888776642 34544444331 1123444566666
Q ss_pred cCChhHHHHHHHccccEEEeCCC-CCCCcHHHHHHHHcCCcEEEcCccccccc-----cc-------------------c
Q 003947 627 RVRNGELYRYICDTKGAFVQPAL-YEAFGLTVVEAMTCGLPTFATCNGGPAEI-----IV-------------------H 681 (784)
Q Consensus 627 ~v~~~el~~~la~aadvfV~PS~-~E~fGltvlEAMA~GlPVIaT~~GG~~Ei-----I~-------------------d 681 (784)
.++..++..++.. +-+||=--. +| |=+.+||+|.|+|.|-.....+..- .. .
T Consensus 329 ~l~~~ef~~lL~~-akvfiGlGfP~E--gPaPlEAia~G~vFlNp~~~pp~s~~n~~ff~~KPt~r~~~SQhPY~e~~iG 405 (559)
T PF15024_consen 329 ILSGDEFQQLLRK-AKVFIGLGFPYE--GPAPLEAIANGCVFLNPRFNPPHSRLNTEFFKGKPTLREWTSQHPYAEEFIG 405 (559)
T ss_pred cCCHHHHHHHHHh-hhEeeecCCCCC--CCChHHHHHcCCccccccCCCCCcccccccccCCCCcceeccCChHHHhhCC
Confidence 6777899999996 668885422 44 3478999999999988765433211 10 1
Q ss_pred CceEEEECCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Q 003947 682 GKSGFHIDPYKGDQATGILVDFFEKCKVDPGHWDEISQGGLKRIQEKYTWKIYSERLLNLSGV 744 (784)
Q Consensus 682 g~~G~li~p~d~e~lAe~I~~~l~~ll~dp~~~~~m~~~a~~~v~~~ytw~~~a~~ll~ly~~ 744 (784)
.-.-+.|+-+|.+++-++|.+++.. .-+| ++--.||-+.|.+++-.+.+.
T Consensus 406 ~PhVytVd~~n~~~v~~Avk~il~~-~v~P------------y~P~efT~egmLeRv~~~ie~ 455 (559)
T PF15024_consen 406 EPHVYTVDINNSTEVEAAVKAILAT-PVEP------------YLPYEFTCEGMLERVNALIEK 455 (559)
T ss_pred CCeEEEEcCCCHHHHHHHHHHHHhc-CCCC------------cCCcccCHHHHHHHHHHHHHh
Confidence 1235678888999999999877632 1222 333578888888888777764
No 217
>TIGR00087 surE 5'/3'-nucleotidase SurE. E. coli SurE is Recommended cutoffs are 15 for homology, 40 for probable orthology, and 200 for orthology with full-length homology.
Probab=43.95 E-value=3.9e+02 Score=28.39 Aligned_cols=34 Identities=29% Similarity=0.327 Sum_probs=22.3
Q ss_pred CCCceEEEE--cC---------CChhHHHHHHHHhCCCcEEEEec
Q 003947 381 QCKPDLIIG--NY---------SDGNIVASLLAHKLDVTQCTIAH 414 (784)
Q Consensus 381 ~~~pDIIh~--~~---------~~~~lva~llar~~gvp~V~t~H 414 (784)
..+||+|.+ |. ..|-..|.+-+...|+|-+..-.
T Consensus 84 ~~~pDLVvSGiN~G~N~g~~v~ySGTVgAA~ea~~~GipaiA~S~ 128 (244)
T TIGR00087 84 PEVPDLVISGINAGENLGTDVTYSGTVGAAMEAAIHGVPAIAISL 128 (244)
T ss_pred cCCCCeEEeccccCCCCCccEecchhHHHHHHHHHcCCCeEEEEe
Confidence 568999995 21 11345566677778999886554
No 218
>PF10649 DUF2478: Protein of unknown function (DUF2478); InterPro: IPR018912 This is a family of hypothetical bacterial proteins encoded in the vicinity of molybdenum ABC transporter gene-products MobA, MobB and MobC. However the function could not be confirmed.
Probab=42.48 E-value=45 Score=33.04 Aligned_cols=39 Identities=21% Similarity=0.439 Sum_probs=29.8
Q ss_pred HHHHHHHccccEEEeCCC----CCCCcHH--HHHHHHcCCcEEEc
Q 003947 632 ELYRYICDTKGAFVQPAL----YEAFGLT--VVEAMTCGLPTFAT 670 (784)
Q Consensus 632 el~~~la~aadvfV~PS~----~E~fGlt--vlEAMA~GlPVIaT 670 (784)
.+.+.+.+.+|++|+.-+ .|+-|+. +.+|++.|+||+++
T Consensus 85 ~l~~al~~~~DLlivNkFGk~Ea~G~Glr~~i~~A~~~giPVLt~ 129 (159)
T PF10649_consen 85 ALRRALAEGADLLIVNKFGKQEAEGRGLRDEIAAALAAGIPVLTA 129 (159)
T ss_pred HHHHHHhcCCCEEEEcccHHhhhcCCCHHHHHHHHHHCCCCEEEE
Confidence 355667767899998754 4555654 78999999999987
No 219
>COG1703 ArgK Putative periplasmic protein kinase ArgK and related GTPases of G3E family [Amino acid transport and metabolism]
Probab=41.42 E-value=4e+02 Score=29.37 Aligned_cols=103 Identities=16% Similarity=0.110 Sum_probs=58.2
Q ss_pred HHHHHHHHcCCCcccceEEEecC--CCCCCCCCcCc--ceeeecCcCCeEEEEccCCCCcccccccccccCChhhHHHHH
Q 003947 294 EMLLRIKQQGLDITPRILIITRL--LPDAVGTTCGQ--RVEKVYGTKYSDILRVPFRTEEGIVRKWISRFEVWPYLETFT 369 (784)
Q Consensus 294 eLa~~L~~~GheV~~~i~VvTr~--~~~~~g~~~~~--~~e~v~~~~~v~IlrvP~~~~~~~~~~~isr~~l~~yl~~f~ 369 (784)
.|.+.|.++||.|- |++-. .|-..|.--+. +.......+|+-|-.+|.+...| -+..-+
T Consensus 70 ~L~~~l~~~G~rVa----VlAVDPSSp~TGGsiLGDRiRM~~~~~~~~vFiRs~~srG~lG-------------GlS~at 132 (323)
T COG1703 70 ALGRELRERGHRVA----VLAVDPSSPFTGGSILGDRIRMQRLAVDPGVFIRSSPSRGTLG-------------GLSRAT 132 (323)
T ss_pred HHHHHHHHCCcEEE----EEEECCCCCCCCccccccHhhHHhhccCCCeEEeecCCCccch-------------hhhHHH
Confidence 56777899999998 66544 33333333332 34444555678888888876544 122222
Q ss_pred HHHHHHHHHHcCCCceEEEEcCCChhHHHHHHHHhCCCcEEEEecCC
Q 003947 370 EDVATEIIQELQCKPDLIIGNYSDGNIVASLLAHKLDVTQCTIAHAL 416 (784)
Q Consensus 370 ~~~~~~i~~~~~~~pDIIh~~~~~~~lva~llar~~gvp~V~t~H~l 416 (784)
.++...+. ...+|+|+....--+-.=.-++....+-++.+..+.
T Consensus 133 ~~~i~~ld---AaG~DvIIVETVGvGQsev~I~~~aDt~~~v~~pg~ 176 (323)
T COG1703 133 REAIKLLD---AAGYDVIIVETVGVGQSEVDIANMADTFLVVMIPGA 176 (323)
T ss_pred HHHHHHHH---hcCCCEEEEEecCCCcchhHHhhhcceEEEEecCCC
Confidence 33333333 348999998665433322334444455566666654
No 220
>COG3181 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=40.69 E-value=5.5e+02 Score=28.49 Aligned_cols=153 Identities=15% Similarity=0.109 Sum_probs=82.7
Q ss_pred EEEEecccCCCChHHHHHHHHHhHccCCCeEEEEEeCCCCCCcccHHHHHHHHHHHHHHHhcCCCCcEEEccCcCCcCCh
Q 003947 551 LFTMARLDRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYGLIDTYKLNGQFRWISSQMNRVRN 630 (784)
Q Consensus 551 Il~vGRL~~~Kgi~~LieA~~~l~~~~~~v~LvIVG~g~~~~s~d~ee~~~~~~l~~li~~l~L~~~V~flG~~~~~v~~ 630 (784)
++.+-.=.+.|.+..|++.++.. |. .+.+.|.+..+ .| .=....+.+..|+ .+.++.+... .
T Consensus 125 ~l~v~~~s~~~t~~dlv~~~k~~----p~-~v~~~~~g~Gs--~d------hl~~~~~~k~~Gi--~~~~Vpy~g~---g 186 (319)
T COG3181 125 VLVVRADSPYKTLKDLVAYAKAD----PG-SVIGGGSGLGS--AD------HLAGALFAKAAGI--KITYVPYKGG---G 186 (319)
T ss_pred eEEEeCCCCcccHHHHHHHHHhC----CC-eEEecCCCCCc--HH------HHHHHHHHHHhCC--ceeEEeecCc---c
Confidence 33333335789999999988763 44 33444444321 11 1234566777787 5666654322 3
Q ss_pred hHHHHHHHccccEEEeCCCCCCCcHH----------HHHHHHcCCcEEEc-CccccccccccCceEEEECCCCHHHHHHH
Q 003947 631 GELYRYICDTKGAFVQPALYEAFGLT----------VVEAMTCGLPTFAT-CNGGPAEIIVHGKSGFHIDPYKGDQATGI 699 (784)
Q Consensus 631 ~el~~~la~aadvfV~PS~~E~fGlt----------vlEAMA~GlPVIaT-~~GG~~EiI~dg~~G~li~p~d~e~lAe~ 699 (784)
+.+..++....|+.+.- ..|..+.+ .-|.-..|.|=|=| .--|..-+ -..-+|+..+++-+++...+
T Consensus 187 ea~taLlgg~v~a~~~~-~se~~~~vksG~lr~Lav~s~eRl~~~pdvPT~~E~G~~~~-~~~wrgvfap~g~~~e~~~~ 264 (319)
T COG3181 187 EALTALLGGHVDAGSTN-LSELLSQVKSGTLRLLAVFSEERLPGLPDVPTLKEQGYDVV-MSIWRGVFAPAGTPDEIIAK 264 (319)
T ss_pred HHHHHHhcCceeeeecC-hhhhhhhhccCceEEEEeechhhcCCCCCCCChHhcCCcee-eeeeeEEEeCCCCCHHHHHH
Confidence 45566665555554432 12221110 01111112111111 00011111 12347889999999999999
Q ss_pred HHHHHHHhcCCHHHHHHHHHHHHH
Q 003947 700 LVDFFEKCKVDPGHWDEISQGGLK 723 (784)
Q Consensus 700 I~~~l~~ll~dp~~~~~m~~~a~~ 723 (784)
+.+.+++.+.+|+..+++.+.+..
T Consensus 265 ~~~a~kk~l~s~e~~~~~~~~~~~ 288 (319)
T COG3181 265 LSAALKKALASPEWQKRLKELGLV 288 (319)
T ss_pred HHHHHHHHhcCHHHHHHHHhcCCC
Confidence 999999999999987776555443
No 221
>KOG0832 consensus Mitochondrial/chloroplast ribosomal protein S2 [Translation, ribosomal structure and biogenesis]
Probab=37.95 E-value=3.4e+02 Score=28.66 Aligned_cols=113 Identities=14% Similarity=0.153 Sum_probs=62.1
Q ss_pred CCCEEEEEecccCCCChHHHHHHHHHhHccCCCeEEEEEeCCCCCCcccHHHHHHHHHHHHHHHhcCCCCcEEEccCcCC
Q 003947 547 SKPILFTMARLDRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYGLIDTYKLNGQFRWISSQMN 626 (784)
Q Consensus 547 ~k~iIl~vGRL~~~Kgi~~LieA~~~l~~~~~~v~LvIVG~g~~~~s~d~ee~~~~~~l~~li~~l~L~~~V~flG~~~~ 626 (784)
.+-+|+|+|+ ..+...++|..++=...+...+-.. ||-... + . .....+.. +.+.+++.+.|....+
T Consensus 107 r~GiILFv~t---n~~~~~~ve~aA~r~~gy~~~~~w~-~G~lTN-~---~--~l~g~~~~--~~~~~pd~~~f~~t~~- 173 (251)
T KOG0832|consen 107 RGGIILFVGT---NNGFKDLVERAARRAGGYSHNRKWL-GGLLTN-A---R--ELFGALVR--KFLSLPDALCFLPTLT- 173 (251)
T ss_pred cCCeEEEEec---CcchHHHHHHHHHHhcCceeeeeec-cceeec-c---h--hhcccccc--cccCCCcceeecccCC-
Confidence 3457889886 4566677776655333222223333 322110 0 0 00011111 2233556666664211
Q ss_pred cCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEc-CccccccccccCceEEEECCCC
Q 003947 627 RVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFAT-CNGGPAEIIVHGKSGFHIDPYK 692 (784)
Q Consensus 627 ~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMA~GlPVIaT-~~GG~~EiI~dg~~G~li~p~d 692 (784)
.|++|.-...|... +++||.-++.|+|+- |....++.| -+-|+.+|
T Consensus 174 --------------~D~vvvln~~e~~s-AilEA~K~~IPTIgIVDtN~~P~li-----TYpVPaND 220 (251)
T KOG0832|consen 174 --------------PDLVVVLNPEENHS-AILEAAKMAIPTIGIVDTNCNPELI-----TYPVPAND 220 (251)
T ss_pred --------------cceeEecCcccccH-HHHHHHHhCCCeEEEecCCCCccce-----eeccCCCC
Confidence 27888777777754 899999999999995 555566666 35566654
No 222
>PRK06988 putative formyltransferase; Provisional
Probab=36.45 E-value=1.5e+02 Score=32.60 Aligned_cols=13 Identities=23% Similarity=0.470 Sum_probs=9.1
Q ss_pred HHHHHHHcCCCcc
Q 003947 295 MLLRIKQQGLDIT 307 (784)
Q Consensus 295 La~~L~~~GheV~ 307 (784)
..+.|.+.|++|.
T Consensus 17 ~L~~L~~~~~~i~ 29 (312)
T PRK06988 17 CLQVLLARGVDVA 29 (312)
T ss_pred HHHHHHhCCCCEE
Confidence 3456677899875
No 223
>TIGR01012 Sa_S2_E_A ribosomal protein Sa(cytosolic)/S2(archaeal). TIGR01011 describes the related protein of organelles and bacteria.
Probab=33.77 E-value=1.8e+02 Score=29.97 Aligned_cols=110 Identities=15% Similarity=0.064 Sum_probs=60.4
Q ss_pred CCChHHHHHHHHHhHccCCCeEEEEEeCCCCCCcccHHHHHHHHHHHHHHHhcCCCC-cEEEcc-CcCCcCChhHHHHHH
Q 003947 560 VKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYGLIDTYKLNG-QFRWIS-SQMNRVRNGELYRYI 637 (784)
Q Consensus 560 ~Kgi~~LieA~~~l~~~~~~v~LvIVG~g~~~~s~d~ee~~~~~~l~~li~~l~L~~-~V~flG-~~~~~v~~~el~~~l 637 (784)
.|=...|..|+.-+.... .-++++||..+. ....+++.++..|-.. +=+|+| .-+++.. . .+
T Consensus 43 ~kT~~~L~~A~~~i~~i~-~~~ILfVgtk~~----------~~~~V~~~A~~~g~~~v~~RWlgGtLTN~~~----~-~~ 106 (196)
T TIGR01012 43 RKTDERLRVAAKFLVRIE-PEDILVVSARIY----------GQKPVLKFAKVTGARAIAGRFTPGTFTNPMQ----K-AF 106 (196)
T ss_pred HHHHHHHHHHHHHHHHhh-CCeEEEEecCHH----------HHHHHHHHHHHhCCceECCeeCCCCCCCccc----c-cc
Confidence 344455555555444433 458999998743 1233455555554321 127887 2233221 1 12
Q ss_pred HccccEEEeCCCCCCCcHHHHHHHHcCCcEEEc-CccccccccccCceEEEECCCC
Q 003947 638 CDTKGAFVQPALYEAFGLTVVEAMTCGLPTFAT-CNGGPAEIIVHGKSGFHIDPYK 692 (784)
Q Consensus 638 a~aadvfV~PS~~E~fGltvlEAMA~GlPVIaT-~~GG~~EiI~dg~~G~li~p~d 692 (784)
. -=|++++..-. .=..++.||...|.|||+- |....++.| -+.||.+|
T Consensus 107 ~-~Pdlliv~dp~-~~~~Av~EA~~l~IP~Iai~DTn~dp~~v-----dypIP~Nd 155 (196)
T TIGR01012 107 R-EPEVVVVTDPR-ADHQALKEASEVGIPIVALCDTDNPLRYV-----DLVIPTNN 155 (196)
T ss_pred C-CCCEEEEECCc-cccHHHHHHHHcCCCEEEEeeCCCCCccC-----CEEECCCC
Confidence 2 13444443222 2246899999999999994 555556665 35676654
No 224
>PF05728 UPF0227: Uncharacterised protein family (UPF0227); InterPro: IPR008886 Despite being classed as uncharacterised proteins, the members of this family are almost certainly enzymes in that they contain a domain distantly related to IPR000073 from INTERPRO. One of the members of this family YqiA has been shown to be a esterase []. Other members, which include the Escherichia coli (strain K12) YcfP protein are uncharacterised.
Probab=31.48 E-value=3.5e+02 Score=27.42 Aligned_cols=31 Identities=23% Similarity=0.297 Sum_probs=23.8
Q ss_pred EEEEcCCChhHHHHHHHHhCCCcEEEEecCC
Q 003947 386 LIIGNYSDGNIVASLLAHKLDVTQCTIAHAL 416 (784)
Q Consensus 386 IIh~~~~~~~lva~llar~~gvp~V~t~H~l 416 (784)
++..-++.|++.|.+++.+.++|.|.+-=++
T Consensus 61 ~~liGSSlGG~~A~~La~~~~~~avLiNPav 91 (187)
T PF05728_consen 61 VVLIGSSLGGFYATYLAERYGLPAVLINPAV 91 (187)
T ss_pred eEEEEEChHHHHHHHHHHHhCCCEEEEcCCC
Confidence 4444467788999999999999987765444
No 225
>PLN00016 RNA-binding protein; Provisional
Probab=31.01 E-value=42 Score=37.59 Aligned_cols=20 Identities=20% Similarity=0.287 Sum_probs=16.2
Q ss_pred HHHHHHHHcCCCcccceEEEecCC
Q 003947 294 EMLLRIKQQGLDITPRILIITRLL 317 (784)
Q Consensus 294 eLa~~L~~~GheV~~~i~VvTr~~ 317 (784)
.|++.|.++||+|+ +++|..
T Consensus 71 ~lv~~L~~~G~~V~----~l~R~~ 90 (378)
T PLN00016 71 YLAKELVKAGHEVT----LFTRGK 90 (378)
T ss_pred HHHHHHHHCCCEEE----EEecCC
Confidence 56677899999998 888764
No 226
>KOG2452 consensus Formyltetrahydrofolate dehydrogenase [Nucleotide transport and metabolism]
Probab=30.15 E-value=48 Score=37.75 Aligned_cols=39 Identities=23% Similarity=0.548 Sum_probs=26.2
Q ss_pred eEEEEEccCccccccCccCCCCcccchhhhHHHHHHHHHHHHHHHHHcCCCcccceEEEecCCCCCCCCC
Q 003947 255 FNVVIFTPHGYFAQDNVLGYPDTGGQVVYILDQVRALENEMLLRIKQQGLDITPRILIITRLLPDAVGTT 324 (784)
Q Consensus 255 mkI~ivs~h~~~~~~~~lg~p~tGG~~vyv~d~~raLe~eLa~~L~~~GheV~~~i~VvTr~~~~~~g~~ 324 (784)
|||++|....+ |+.+|.. |.+.||+|. .|+| +|+..|..
T Consensus 1 mkiaiigqs~f-------------g~~vy~~-------------lrk~gheiv---~vft--ipdk~g~~ 39 (881)
T KOG2452|consen 1 MKIAVIGQSLF-------------GQEVYCH-------------LRKEGHEVV---GVFT--VPDKDGKA 39 (881)
T ss_pred CeeEEechhhh-------------hHHHHHH-------------HHhcCceEE---EEEE--ecCCCCCc
Confidence 78999865444 6677765 899999985 3444 45555543
No 227
>TIGR00732 dprA DNA protecting protein DprA. Disruption of this gene in both Haemophilus influenzae and Helicobacter pylori drastically reduces the efficiency of transformation with exogenous DNA, but with different levels of effect on chromosomal (linear) and plasmid (circular) DNA. This difference suggests the DprA is not active in recombination, and it has been shown not to affect DNA binding, leaving the intermediate step in natural transformation, DNA processing. In Strep. pneumoniae, inactivation of dprA had no effect on the uptake of DNA. All of these data indicated that DprA is required at a later stage in transformation. Subsequently DprA and RecA were both shown in S. pneumoniae to be required to protect incoming ssDNA from immediate degradation. Role of DprA in non-transformable species is not known. The gene symbol smf was assigned in E. coli, but without assignment of function.
Probab=29.80 E-value=3.2e+02 Score=28.45 Aligned_cols=121 Identities=15% Similarity=0.098 Sum_probs=61.1
Q ss_pred CCEEEEEecccCCCChHHHHHHHHHhHccCCCeEEEEEeCCCCCCcccHHHHHHHHHHHHHHHhcC-CCCcE-EEc-cCc
Q 003947 548 KPILFTMARLDRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYGLIDTYK-LNGQF-RWI-SSQ 624 (784)
Q Consensus 548 k~iIl~vGRL~~~Kgi~~LieA~~~l~~~~~~v~LvIVG~g~~~~s~d~ee~~~~~~l~~li~~l~-L~~~V-~fl-G~~ 624 (784)
..+|++=+ .+|+|....-.+... ....+.|+|+|.+... + .+-.++.+.+.+.| +- + .|. +..
T Consensus 74 g~~IVSG~----A~GiD~~ah~~al~~---~g~tIaVl~~gld~~y--p---~~n~~l~~~i~~~ggll--iSe~p~~~~ 139 (220)
T TIGR00732 74 GVTIVSGL----ALGIDGIAHKAALKV---NGRTIAVLGTGLDQIY--P---RQNSKLAAKIAENGGLL--LSEYPPDTK 139 (220)
T ss_pred CCEEEcCc----hhhHHHHHHHHHHHc---CCCEEEEECCCCccCC--c---hhhHHHHHHHHHcCCEE--EEecCCCCC
Confidence 34555432 689998876555432 2457777787765211 0 11223333333333 10 1 111 111
Q ss_pred CCcCChhHHHHHHHccccEEEeCCCCCCCc--HHHHHHHHcCCcEEEcC-------ccccccccccC
Q 003947 625 MNRVRNGELYRYICDTKGAFVQPALYEAFG--LTVVEAMTCGLPTFATC-------NGGPAEIIVHG 682 (784)
Q Consensus 625 ~~~v~~~el~~~la~aadvfV~PS~~E~fG--ltvlEAMA~GlPVIaT~-------~GG~~EiI~dg 682 (784)
..+.....--++++..+++.|+..-.+.-| .++-.|+..|+||+|-. ..|...+|.+|
T Consensus 140 ~~~~~f~~RNriia~ls~~vivve~~~~sGtl~ta~~A~~~gr~v~~~pg~~~~~~~~G~~~Li~~G 206 (220)
T TIGR00732 140 PIKYNFPKRNRIISGLSRAVLVVEAPLKSGALITARYALEQGREVFAYPGDLNSPESDGCHKLIEQG 206 (220)
T ss_pred CCcccHHHHHHHHHHhcCEEEEEECCCCCchHHHHHHHHHhCCcEEEEcCCCCCccchHHHHHHHCC
Confidence 101111223344544455544443333334 56789999999999962 24677888887
No 228
>PRK08057 cobalt-precorrin-6x reductase; Reviewed
Probab=29.48 E-value=2.4e+02 Score=30.06 Aligned_cols=34 Identities=12% Similarity=0.056 Sum_probs=22.1
Q ss_pred ccEEEeCCC-CCCCcHHHHHHHHcCCcEEEcCccc
Q 003947 641 KGAFVQPAL-YEAFGLTVVEAMTCGLPTFATCNGG 674 (784)
Q Consensus 641 advfV~PS~-~E~fGltvlEAMA~GlPVIaT~~GG 674 (784)
+|++|.=.. ..|+.-++--|+.+|+|||.-+-+-
T Consensus 191 i~~lVtK~SG~~g~~eKi~AA~~lgi~vivI~RP~ 225 (248)
T PRK08057 191 IDVVVTKNSGGAGTEAKLEAARELGIPVVMIARPA 225 (248)
T ss_pred CCEEEEcCCCchhhHHHHHHHHHcCCeEEEEeCCC
Confidence 445554322 2245567888899999999876553
No 229
>TIGR02990 ectoine_eutA ectoine utilization protein EutA. Members of this protein family are EutA, a predicted arylmalonate decarboxylase found in a conserved ectoine utilization operon of species that include Sinorhizobium meliloti 1021 (where it is known to be induced by ectoine), Mesorhizobium loti and Silicibacter pomeroyi. It is missing from two other species with the other ectoine transport and utilization genes: Pseudomonas putida and Agrobacterium tumefaciens.
Probab=29.05 E-value=3.2e+02 Score=28.93 Aligned_cols=35 Identities=11% Similarity=0.071 Sum_probs=22.9
Q ss_pred CCCceEEE--EcCCChhHHHHHHHHhCCCcEEEEecC
Q 003947 381 QCKPDLII--GNYSDGNIVASLLAHKLDVTQCTIAHA 415 (784)
Q Consensus 381 ~~~pDIIh--~~~~~~~lva~llar~~gvp~V~t~H~ 415 (784)
...+|.|. |.+..+.-+.-.+-+.+|+|++.....
T Consensus 179 ~~~aDAifisCTnLrt~~vi~~lE~~lGkPVlsSNqa 215 (239)
T TIGR02990 179 DPDADALFLSCTALRAATCAQRIEQAIGKPVVTSNQA 215 (239)
T ss_pred CCCCCEEEEeCCCchhHHHHHHHHHHHCCCEEEHHHH
Confidence 44678777 444444445566777799999865554
No 230
>PRK13933 stationary phase survival protein SurE; Provisional
Probab=28.83 E-value=7.4e+02 Score=26.47 Aligned_cols=35 Identities=14% Similarity=0.248 Sum_probs=22.5
Q ss_pred cCCCceEEEEc--C---------CChhHHHHHHHHhCCCcEEEEec
Q 003947 380 LQCKPDLIIGN--Y---------SDGNIVASLLAHKLDVTQCTIAH 414 (784)
Q Consensus 380 ~~~~pDIIh~~--~---------~~~~lva~llar~~gvp~V~t~H 414 (784)
+..+||+|++- . ..|-..|.+-+...|+|-+..-.
T Consensus 84 ~~~~pDLVvSGIN~G~N~g~dv~ySGTVgAA~ea~~~GiPsiA~S~ 129 (253)
T PRK13933 84 VPDNIDMVISGINKGLNIGNDILYSGTVSAAIEGAIYKVPSIAVSA 129 (253)
T ss_pred cCCCCCEEEECCcCCCCCCcCCccchhHHHHHHHHHcCCCeEEEEe
Confidence 35689999952 1 11345666677778999875443
No 231
>COG3171 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=28.66 E-value=53 Score=30.48 Aligned_cols=32 Identities=38% Similarity=0.703 Sum_probs=27.0
Q ss_pred HHHhcCccccc----CCchHHHHHHHHHHHHhhcCC
Q 003947 208 KFQEIGLERGW----GDNAEHVLGMIQLLLDLLQAP 239 (784)
Q Consensus 208 ~~~~~~~~~~~----g~~~~~~~~~~~~~~~~~~~p 239 (784)
+||+|||..-| |.+|+-+-|++.-..|-+.+|
T Consensus 25 EFQeLgF~v~~~~~eg~~ae~~dea~drFidevI~~ 60 (119)
T COG3171 25 EFQELGFSVQWSFHEGTSAEDVDEAVDRFIDEVIAP 60 (119)
T ss_pred HHHhhheeeEEEecCCccHHHHHHHHHHHHHHHHcc
Confidence 69999999999 778999999998887666554
No 232
>PRK13935 stationary phase survival protein SurE; Provisional
Probab=26.97 E-value=8e+02 Score=26.25 Aligned_cols=34 Identities=24% Similarity=0.337 Sum_probs=22.0
Q ss_pred CCCceEEEEc--C---------CChhHHHHHHHHhCCCcEEEEec
Q 003947 381 QCKPDLIIGN--Y---------SDGNIVASLLAHKLDVTQCTIAH 414 (784)
Q Consensus 381 ~~~pDIIh~~--~---------~~~~lva~llar~~gvp~V~t~H 414 (784)
..+||+|++- . ..+...|..-+...|+|-+..-.
T Consensus 84 ~~~pDLVvSGIN~G~N~g~~v~ySGTVgAA~ea~~~GiPaiA~S~ 128 (253)
T PRK13935 84 DKKVDLVISGINRGPNLGTDVLYSGTVSGALEGAMMGVPSIAISS 128 (253)
T ss_pred cCCCCEEEeCCccCCCCCcCCcccHhHHHHHHHHhcCCCeEEEEc
Confidence 5689999951 1 11344566667778999875544
No 233
>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase
Probab=26.88 E-value=53 Score=37.19 Aligned_cols=52 Identities=17% Similarity=0.388 Sum_probs=38.1
Q ss_pred cCCCcchHhHHhcCCCcceEEEEEccCccccccCccCCCCcccchhhhHHHHHHHHHHHHHHHHHcCCCcccceEEEecC
Q 003947 237 QAPESSTLETFLGKIPRVFNVVIFTPHGYFAQDNVLGYPDTGGQVVYILDQVRALENEMLLRIKQQGLDITPRILIITRL 316 (784)
Q Consensus 237 ~~p~~~~~~~~~~~~p~~mkI~ivs~h~~~~~~~~lg~p~tGG~~vyv~d~~raLe~eLa~~L~~~GheV~~~i~VvTr~ 316 (784)
.+|.+..-..|-++.+..|||+|+...|+.| . .++++|.++||+|. +++|.
T Consensus 43 ~~~~~~~~~~~~~~~~~~~kVLVtGatG~IG--------------~-----------~l~~~Ll~~G~~V~----~l~R~ 93 (390)
T PLN02657 43 RATAAAAAQSFRSKEPKDVTVLVVGATGYIG--------------K-----------FVVRELVRRGYNVV----AVARE 93 (390)
T ss_pred cCCCccccccccccCCCCCEEEEECCCcHHH--------------H-----------HHHHHHHHCCCEEE----EEEec
Confidence 4666777777888888889999986555532 1 45667888999987 78775
Q ss_pred C
Q 003947 317 L 317 (784)
Q Consensus 317 ~ 317 (784)
.
T Consensus 94 ~ 94 (390)
T PLN02657 94 K 94 (390)
T ss_pred h
Confidence 3
No 234
>cd03146 GAT1_Peptidase_E Type 1 glutamine amidotransferase (GATase1)-like domain found in peptidase E. Type 1 glutamine amidotransferase (GATase1)-like domain found in peptidase E. This group contains proteins similar to the aspartyl dipeptidases Salmonella typhimurium peptidase E and Xenopus laevis peptidase E. In bacteria peptidase E is believed to play a role in degrading peptides generated by intracellular protein breakdown or imported into the cell as nutrient sources. Peptidase E uniquely hydrolyses only Asp-X dipeptides (where X is any amino acid), and one tripeptide Asp-Gly-Gly. Peptidase E is believed to be a serine peptidase having a Ser-His-Glu catalytic triad which differs from the Cys-His-Glu catalytic triad typical of GATase1 domains by having a Ser in place of the reactive Cys at the nucleophile elbow. Xenopus PepE is developmentally regulated in response to thyroid hormone and, it is thought to play a role in apoptosis during tail reabsorption.
Probab=26.10 E-value=6.8e+02 Score=25.60 Aligned_cols=101 Identities=10% Similarity=0.132 Sum_probs=60.4
Q ss_pred CCChHHHHHHHHHhHccCCCeEEEEEeCCCCCCcccHHHHHHHHHHHHHHHhc-CCCCcEEEccCcCCcCChhHHHHHHH
Q 003947 560 VKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYGLIDTY-KLNGQFRWISSQMNRVRNGELYRYIC 638 (784)
Q Consensus 560 ~Kgi~~LieA~~~l~~~~~~v~LvIVG~g~~~~s~d~ee~~~~~~l~~li~~l-~L~~~V~flG~~~~~v~~~el~~~la 638 (784)
..+.+.+.+.+.+..+ ++.+++++..... +.+ ++.+.+.+..+++ |..-.+... .+.++..+.+.
T Consensus 14 ~~~~~~l~~~l~~~~~--~~~~i~~IptAs~----~~~--~~~~~~~~a~~~l~G~~~~~~~~------~~~~~~~~~l~ 79 (212)
T cd03146 14 AHALPAIDDLLLSLTK--ARPKVLFVPTASG----DRD--EYTARFYAAFESLRGVEVSHLHL------FDTEDPLDALL 79 (212)
T ss_pred ccchHHHHHHHHHhcc--CCCeEEEECCCCC----CHH--HHHHHHHHHHhhccCcEEEEEec------cCcccHHHHHh
Confidence 3455666666665542 4678888887754 222 4456677777777 664322222 11345567777
Q ss_pred ccccEEEeCCC--------CCCCcH--HHHHHHHcCCcEEEcCcccc
Q 003947 639 DTKGAFVQPAL--------YEAFGL--TVVEAMTCGLPTFATCNGGP 675 (784)
Q Consensus 639 ~aadvfV~PS~--------~E~fGl--tvlEAMA~GlPVIaT~~GG~ 675 (784)
. +|++++|=- ....|+ .+-++...|+|++.++.|..
T Consensus 80 ~-ad~I~l~GG~~~~~~~~l~~~~l~~~l~~~~~~g~~i~G~SAGa~ 125 (212)
T cd03146 80 E-ADVIYVGGGNTFNLLAQWREHGLDAILKAALERGVVYIGWSAGSN 125 (212)
T ss_pred c-CCEEEECCchHHHHHHHHHHcCHHHHHHHHHHCCCEEEEECHhHH
Confidence 5 899999831 111122 24556678999999987754
No 235
>COG4088 Predicted nucleotide kinase [Nucleotide transport and metabolism]
Probab=25.92 E-value=2.6e+02 Score=29.35 Aligned_cols=51 Identities=22% Similarity=0.203 Sum_probs=29.1
Q ss_pred hHHHHHHHHHHHHHHHcCCCceEEE-EcCCCh-hHHHHHHHHhCCCcEEEEec
Q 003947 364 YLETFTEDVATEIIQELQCKPDLII-GNYSDG-NIVASLLAHKLDVTQCTIAH 414 (784)
Q Consensus 364 yl~~f~~~~~~~i~~~~~~~pDIIh-~~~~~~-~lva~llar~~gvp~V~t~H 414 (784)
|.+.+.....+.+..+++...-|+- .||..+ -.-....++.+.+|+|.+.-
T Consensus 56 yres~~ks~~rlldSalkn~~VIvDdtNYyksmRrqL~ceak~~~tt~ciIyl 108 (261)
T COG4088 56 YRESFLKSVERLLDSALKNYLVIVDDTNYYKSMRRQLACEAKERKTTWCIIYL 108 (261)
T ss_pred HHHHHHHHHHHHHHHHhcceEEEEecccHHHHHHHHHHHHHHhcCCceEEEEE
Confidence 5667777777766665443333333 355544 22334456777888886544
No 236
>PRK11519 tyrosine kinase; Provisional
Probab=25.30 E-value=1.1e+03 Score=29.10 Aligned_cols=43 Identities=14% Similarity=0.068 Sum_probs=27.7
Q ss_pred HHHHHHHcCCCceEEEEcCCCh--hHHHHHHHHhCCCcEEEEecC
Q 003947 373 ATEIIQELQCKPDLIIGNYSDG--NIVASLLAHKLDVTQCTIAHA 415 (784)
Q Consensus 373 ~~~i~~~~~~~pDIIh~~~~~~--~lva~llar~~gvp~V~t~H~ 415 (784)
...++..+..++|+|+...++. ..-+..+++..+..+.+.-++
T Consensus 625 ~~~ll~~l~~~yD~ViiDtpP~~~v~Da~~l~~~~d~~l~Vvr~~ 669 (719)
T PRK11519 625 FAELVNWASKNYDLVLIDTPPILAVTDAAIVGRHVGTTLMVARYA 669 (719)
T ss_pred HHHHHHHHHhcCCEEEEeCCCcccchHHHHHHHHCCeEEEEEeCC
Confidence 3444444566899999887764 234566777777666555554
No 237
>PF06258 Mito_fiss_Elm1: Mitochondrial fission ELM1; InterPro: IPR009367 This family consists of several hypothetical eukaryotic and prokaryotic proteins. The function of this family is unknown.
Probab=25.10 E-value=9.4e+02 Score=26.41 Aligned_cols=137 Identities=18% Similarity=0.144 Sum_probs=81.2
Q ss_pred CCCCEEEEEecccCCCChHHHHHHH----HHhHccCCCeEEEEEeCCCCCCcccHH-HHHHHHHHHHHHHhcCCCCcEEE
Q 003947 546 SSKPILFTMARLDRVKNLTGLVEWY----GKNAKLRELVNLVVVGGDRRKESKDLE-EQAEMKKMYGLIDTYKLNGQFRW 620 (784)
Q Consensus 546 ~~k~iIl~vGRL~~~Kgi~~LieA~----~~l~~~~~~v~LvIVG~g~~~~s~d~e-e~~~~~~l~~li~~l~L~~~V~f 620 (784)
+...+|.+.|.+.+... ..+.++. .++..+....-.|+|||.......+.+ .....+.+.+++++.+ ..+..
T Consensus 111 ~~~Nvl~t~ga~~~i~~-~~l~~a~~~~~~~~~~l~~p~~avLIGG~s~~~~~~~~~~~~l~~~l~~~~~~~~--~~~~v 187 (311)
T PF06258_consen 111 RGPNVLPTLGAPNRITP-ERLAEAAAAWAPRLAALPRPRVAVLIGGDSKHYRWDEEDAERLLDQLAALAAAYG--GSLLV 187 (311)
T ss_pred CCCceEecccCCCcCCH-HHHHHHHHhhhhhhccCCCCeEEEEECcCCCCcccCHHHHHHHHHHHHHHHHhCC--CeEEE
Confidence 45667888888877554 3444433 233333345678888886544444444 3345567778888776 34555
Q ss_pred ccCcCCcCChhHHHHHHHccc----cEEEeCCCCCCCcHHHHHHHHcCCcEEEcC--ccccccccccCceEEEECCC
Q 003947 621 ISSQMNRVRNGELYRYICDTK----GAFVQPALYEAFGLTVVEAMTCGLPTFATC--NGGPAEIIVHGKSGFHIDPY 691 (784)
Q Consensus 621 lG~~~~~v~~~el~~~la~aa----dvfV~PS~~E~fGltvlEAMA~GlPVIaT~--~GG~~EiI~dg~~G~li~p~ 691 (784)
+.+ +-...++...+.+.. .+.+. ..++ .+...+.+++.--+++|. +.=+.|-+..|..-++++..
T Consensus 188 ttS---RRTp~~~~~~L~~~~~~~~~~~~~--~~~~-~nPy~~~La~ad~i~VT~DSvSMvsEA~~tG~pV~v~~l~ 258 (311)
T PF06258_consen 188 TTS---RRTPPEAEAALRELLKDNPGVYIW--DGTG-ENPYLGFLAAADAIVVTEDSVSMVSEAAATGKPVYVLPLP 258 (311)
T ss_pred EcC---CCCcHHHHHHHHHhhcCCCceEEe--cCCC-CCcHHHHHHhCCEEEEcCccHHHHHHHHHcCCCEEEecCC
Confidence 442 222344444443322 24344 2344 446889999999999983 33458888888777777654
No 238
>PRK13940 glutamyl-tRNA reductase; Provisional
Probab=25.08 E-value=1.1e+03 Score=27.10 Aligned_cols=67 Identities=12% Similarity=0.002 Sum_probs=40.4
Q ss_pred ChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcCccccccccccC--ceEEEECCCCHHHHHHHH
Q 003947 629 RNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCNGGPAEIIVHG--KSGFHIDPYKGDQATGIL 700 (784)
Q Consensus 629 ~~~el~~~la~aadvfV~PS~~E~fGltvlEAMA~GlPVIaT~~GG~~EiI~dg--~~G~li~p~d~e~lAe~I 700 (784)
+.++++..+.+ +|+++..+-...+ ++-..|.-+.|.+.-|.+-|+++=.+- ..|..+ .|.+++.+..
T Consensus 232 ~~~~l~~~l~~-aDiVI~aT~a~~~--vi~~~~~~~~~~~~iDLavPRdidp~v~~l~~v~l--~~iDdl~~i~ 300 (414)
T PRK13940 232 YLSELPQLIKK-ADIIIAAVNVLEY--IVTCKYVGDKPRVFIDISIPQALDPKLGELEQNVY--YCVDDINAVI 300 (414)
T ss_pred cHHHHHHHhcc-CCEEEECcCCCCe--eECHHHhCCCCeEEEEeCCCCCCCccccCcCCeEE--EeHHHHHHHH
Confidence 34678888886 9999987643222 122344568899999998887764321 123332 3555554444
No 239
>PF03358 FMN_red: NADPH-dependent FMN reductase; InterPro: IPR005025 NADPH-dependent FMN reductase (1.5.1.29 from EC) reduces FMN and also reduces riboflavin and FAD, although more slowly. Members of this entry catalyse the reaction NAD(P)H + FMN = NAD(P)(+) + FMNH(2).; PDB: 3SVL_B 3GFS_F 3GFQ_A 1NNI_1 2GSW_B 3GFR_D 1T0I_B 3D7N_A 2R97_A 3B6K_A ....
Probab=25.05 E-value=82 Score=30.06 Aligned_cols=35 Identities=14% Similarity=0.410 Sum_probs=22.4
Q ss_pred eEEEEEccCccccccCccCCCCcccchhhhHHHHHHHHHHHHHHHHHcCCCcc
Q 003947 255 FNVVIFTPHGYFAQDNVLGYPDTGGQVVYILDQVRALENEMLLRIKQQGLDIT 307 (784)
Q Consensus 255 mkI~ivs~h~~~~~~~~lg~p~tGG~~vyv~d~~raLe~eLa~~L~~~GheV~ 307 (784)
|||++|+ |+|...|.... |.+.+++.+.+.|++++
T Consensus 1 Mkilii~-----------gS~r~~~~t~~-------l~~~~~~~l~~~g~e~~ 35 (152)
T PF03358_consen 1 MKILIIN-----------GSPRKNSNTRK-------LAEAVAEQLEEAGAEVE 35 (152)
T ss_dssp -EEEEEE-----------SSSSTTSHHHH-------HHHHHHHHHHHTTEEEE
T ss_pred CEEEEEE-----------CcCCCCCHHHH-------HHHHHHHHHHHcCCEEE
Confidence 7999985 44444454333 33456677888899998
No 240
>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]
Probab=24.72 E-value=2.9e+02 Score=28.76 Aligned_cols=34 Identities=26% Similarity=0.279 Sum_probs=20.5
Q ss_pred CCCceEEEEcCCC--hhHHHHHHHHh-CCCcEE-EEec
Q 003947 381 QCKPDLIIGNYSD--GNIVASLLAHK-LDVTQC-TIAH 414 (784)
Q Consensus 381 ~~~pDIIh~~~~~--~~lva~llar~-~gvp~V-~t~H 414 (784)
-.+.|++.+-... .|.++..++++ +|+|.+ ..++
T Consensus 64 i~~aD~vva~t~~d~~N~i~~~la~~~~gv~~viar~~ 101 (225)
T COG0569 64 IDDADAVVAATGNDEVNSVLALLALKEFGVPRVIARAR 101 (225)
T ss_pred CCcCCEEEEeeCCCHHHHHHHHHHHHhcCCCcEEEEec
Confidence 3478888854433 36666666655 888855 3444
No 241
>TIGR01286 nifK nitrogenase molybdenum-iron protein beta chain. This model represents the majority of known sequences of the nitrogenase molybdenum-iron protein beta subunit. A distinct clade in a phylogenetic tree contains molybdenum-iron, vanadium-iron, and iron-iron forms of nitrogenase beta subunit and is excluded from this model. Nitrogenase, also called dinitrogenase, is responsible for nitrogen fixation. Note: the trusted cutoff score has recently been lowered to include an additional family in which the beta subunit is shorter by about 50 amino acids at the N-terminus. In species with the shorter form of the beta subunit, the alpha subunit has a novel insert of similar length.
Probab=24.57 E-value=1.2e+03 Score=27.65 Aligned_cols=98 Identities=7% Similarity=0.006 Sum_probs=53.6
Q ss_pred CCCChHHHHHHHHHh-Hc-------cCCCeEEEEEeCCCCCCcccHHHHHHHHHHHHHHHhcCCCCcE------------
Q 003947 559 RVKNLTGLVEWYGKN-AK-------LRELVNLVVVGGDRRKESKDLEEQAEMKKMYGLIDTYKLNGQF------------ 618 (784)
Q Consensus 559 ~~Kgi~~LieA~~~l-~~-------~~~~v~LvIVG~g~~~~s~d~ee~~~~~~l~~li~~l~L~~~V------------ 618 (784)
...|.+.+++++-+. .+ ..++-.+-|+|+.... ....++++++.+..|++-++
T Consensus 192 ~~~Gyd~a~~ail~~l~~~~~~~~~~~~~~~VNii~g~~~~-------~gd~~eikrlL~~~Gi~~~~l~d~s~~~d~p~ 264 (515)
T TIGR01286 192 HITGYDNMFKGILEYFTKGSMDDKVVGSNGKINIIPGFETY-------IGNFREIKRILSLMGVGYTLLSDPEEVLDTPA 264 (515)
T ss_pred HHHHHHHHHHHHHHHHhhcccccccCCCCCeEEEECCCCCC-------chhHHHHHHHHHHcCCCeEEccCccccccCCC
Confidence 457777777666432 11 1122334456643210 13457788889999986554
Q ss_pred -----EEccCcCCcCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHH--cCCcEEEcC
Q 003947 619 -----RWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMT--CGLPTFATC 671 (784)
Q Consensus 619 -----~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMA--~GlPVIaT~ 671 (784)
.+.| ..+.+++...-...+.+.++|. .+....+.|. +|.|.+...
T Consensus 265 ~g~~~~~~g----gttleei~~a~~A~~~ivl~~~----~~~~~a~~l~~~~g~p~~~~~ 316 (515)
T TIGR01286 265 DGEFRMYAG----GTTLEEMKDAPNAEATVLLQPY----TLRKTKEYIEKTWKQETPKLN 316 (515)
T ss_pred CCCccccCC----CCCHHHHHHhhhCcEEEEEchh----hhHHHHHHHHHHhCCCcccCC
Confidence 2222 3556777776654334444442 2445666665 799986543
No 242
>cd01020 TroA_b Metal binding protein TroA_b. These proteins are predicted to function as initial receptors in ABC transport of metal ions. They belong to the TroA superfamily of helical backbone metal receptor proteins that share a distinct fold and ligand binding mechanism. A typical TroA protein is comprised of two globular subdomains connected by a single helix and can bind the metal ion in the cleft between these domains. In addition, these proteins sometimes have a low complexity region containing a metal-binding histidine-rich motif (repetitive HDH sequence).
Probab=24.40 E-value=4e+02 Score=28.33 Aligned_cols=127 Identities=15% Similarity=0.112 Sum_probs=71.0
Q ss_pred HHHHccccEEEeCCC-CCCCcHHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHHHHHHHHHHHHHHhcCCHHH
Q 003947 635 RYICDTKGAFVQPAL-YEAFGLTVVEAMTCGLPTFATCNGGPAEIIVHGKSGFHIDPYKGDQATGILVDFFEKCKVDPGH 713 (784)
Q Consensus 635 ~~la~aadvfV~PS~-~E~fGltvlEAMA~GlPVIaT~~GG~~EiI~dg~~G~li~p~d~e~lAe~I~~~l~~ll~dp~~ 713 (784)
.-+++ ||++|.--. +|+|=-.+++.+ .+.+++....++..+- .+...-+..+|.+...+++.|.+.+. ..||+.
T Consensus 48 ~~l~~-ADliv~~G~~lE~~~~k~~~~~-~~~~v~~~~~~~~~~~-~~~dPH~Wldp~n~~~~a~~I~~~L~--~~dP~~ 122 (264)
T cd01020 48 AKVST-ADIVVYNGGGYDPWMTKLLADT-KDVIVIAADLDGHDDK-EGDNPHLWYDPETMSKVANALADALV--KADPDN 122 (264)
T ss_pred HHHhh-CCEEEEeCCCchHHHHHHHHhc-CCceEEeeecccccCC-CCCCCceecCHhHHHHHHHHHHHHHH--HhCccc
Confidence 34554 787777542 566555566555 4556666544432110 01234567889999999999998874 368888
Q ss_pred HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHhhhhhhhhhhhHHHHhhHHHHHHHhhcc
Q 003947 714 WDEISQGGLKRIQEKYTWKIYSERLLNLSGVYGFWKHLSKLDCREKNRYLEMFYSLMYR 772 (784)
Q Consensus 714 ~~~m~~~a~~~v~~~ytw~~~a~~ll~ly~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~ 772 (784)
.+...+|+.++..+ ++..-+++.+....+.--++++ -+..-.|+.--|.|...
T Consensus 123 ~~~y~~N~~~~~~~---l~~l~~~~~~~~~~~~~~~~v~---~H~af~Y~~~~yGl~~~ 175 (264)
T cd01020 123 KKYYQANAKKFVAS---LKPLAAKIAELSAKYKGAPVAA---TEPVFDYLLDALGMKER 175 (264)
T ss_pred HHHHHHHHHHHHHH---HHHHHHHHHHHHhhCCCCeEEE---eCchHHHHHHHCCCccc
Confidence 88888888877644 3333333333333221111111 22445566666666543
No 243
>PRK12342 hypothetical protein; Provisional
Probab=23.70 E-value=1.9e+02 Score=31.00 Aligned_cols=34 Identities=21% Similarity=0.209 Sum_probs=26.6
Q ss_pred CceEEEEcC--CC--hhHHHHHHHHhCCCcEEEEecCC
Q 003947 383 KPDLIIGNY--SD--GNIVASLLAHKLDVTQCTIAHAL 416 (784)
Q Consensus 383 ~pDIIh~~~--~~--~~lva~llar~~gvp~V~t~H~l 416 (784)
.||+|.+-. .+ ++.++..+|..+|.|++..+..+
T Consensus 109 ~~DLVl~G~~s~D~~tgqvg~~lA~~Lg~P~vt~v~~~ 146 (254)
T PRK12342 109 GFDLLLFGEGSGDLYAQQVGLLLGELLQLPVINAVSKI 146 (254)
T ss_pred CCCEEEEcCCcccCCCCCHHHHHHHHhCCCcEeeEEEE
Confidence 599999632 23 47899999999999999777654
No 244
>CHL00200 trpA tryptophan synthase alpha subunit; Provisional
Probab=23.59 E-value=9.3e+02 Score=25.82 Aligned_cols=121 Identities=9% Similarity=0.097 Sum_probs=69.8
Q ss_pred CCCEEEEEecccC--CCChHHHHHHHHHhHccCCCeEEEEEeCCCCCCcccHHHHHHHHHHHHHHHhcCCCCcEEEccCc
Q 003947 547 SKPILFTMARLDR--VKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYGLIDTYKLNGQFRWISSQ 624 (784)
Q Consensus 547 ~k~iIl~vGRL~~--~Kgi~~LieA~~~l~~~~~~v~LvIVG~g~~~~s~d~ee~~~~~~l~~li~~l~L~~~V~flG~~ 624 (784)
+.|++ .|+-..+ ..|++.+++.+++. .+.=+++=+-+. ++.+++.+.++++|+.. |.++...
T Consensus 91 ~~p~v-lm~Y~N~i~~~G~e~F~~~~~~a-----GvdgviipDLP~---------ee~~~~~~~~~~~gi~~-I~lv~Pt 154 (263)
T CHL00200 91 KAPIV-IFTYYNPVLHYGINKFIKKISQA-----GVKGLIIPDLPY---------EESDYLISVCNLYNIEL-ILLIAPT 154 (263)
T ss_pred CCCEE-EEecccHHHHhCHHHHHHHHHHc-----CCeEEEecCCCH---------HHHHHHHHHHHHcCCCE-EEEECCC
Confidence 44543 6666654 55999888877664 456666665543 45677889999999854 6666532
Q ss_pred CCcCChhHHHHHHHccccEEEeC-CCCC------CCcHHHHHHH-----HcCCcEEEcCcccc-----ccccccCceEEE
Q 003947 625 MNRVRNGELYRYICDTKGAFVQP-ALYE------AFGLTVVEAM-----TCGLPTFATCNGGP-----AEIIVHGKSGFH 687 (784)
Q Consensus 625 ~~~v~~~el~~~la~aadvfV~P-S~~E------~fGltvlEAM-----A~GlPVIaT~~GG~-----~EiI~dg~~G~l 687 (784)
+ +.+.+..+.. .++-||.- |..- .++-.+.|.+ .+++|+.+ .+|-- .++...|-.|++
T Consensus 155 T---~~eri~~i~~-~a~gFIY~vS~~GvTG~~~~~~~~~~~~i~~ir~~t~~Pi~v-GFGI~~~e~~~~~~~~GADGvV 229 (263)
T CHL00200 155 S---SKSRIQKIAR-AAPGCIYLVSTTGVTGLKTELDKKLKKLIETIKKMTNKPIIL-GFGISTSEQIKQIKGWNINGIV 229 (263)
T ss_pred C---CHHHHHHHHH-hCCCcEEEEcCCCCCCCCccccHHHHHHHHHHHHhcCCCEEE-ECCcCCHHHHHHHHhcCCCEEE
Confidence 2 2334444444 56634432 2311 2233344444 67899987 33321 234445578888
Q ss_pred E
Q 003947 688 I 688 (784)
Q Consensus 688 i 688 (784)
+
T Consensus 230 V 230 (263)
T CHL00200 230 I 230 (263)
T ss_pred E
Confidence 8
No 245
>COG4195 Phage-related replication protein [General function prediction only]
Probab=23.56 E-value=84 Score=31.88 Aligned_cols=61 Identities=23% Similarity=0.236 Sum_probs=36.9
Q ss_pred chHHHHHHHHHHHHhhcCCCcchHhHHhcCCCcceEEEEEccCccccccCccCCCCcccchhhhHHHHHHHHHHHHHH
Q 003947 221 NAEHVLGMIQLLLDLLQAPESSTLETFLGKIPRVFNVVIFTPHGYFAQDNVLGYPDTGGQVVYILDQVRALENEMLLR 298 (784)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~p~~mkI~ivs~h~~~~~~~~lg~p~tGG~~vyv~d~~raLe~eLa~~ 298 (784)
.+++.-....-|.....+-|+..+.. .+. --+++|++||| ||++--+.++||++.++-+-+
T Consensus 7 ~~~d~y~~f~~Lse~esp~dy~ii~~--e~~--~S~v~ilapHG-------------G~IE~GvSELare~s~e~S~y 67 (208)
T COG4195 7 SAEDEYSNFASLSENESPVDYGIIYT--EKL--GSRVLILAPHG-------------GGIEGGVSELAREFSDEYSGY 67 (208)
T ss_pred CccccccCHHHHHhccCcccCCeEEe--ecc--CceEEEEeccC-------------CccCccHHHHHHHHHHHHHHH
Confidence 34555555566666555434444432 111 24799999998 666666888888877664433
No 246
>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit. This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.
Probab=23.55 E-value=3.7e+02 Score=29.11 Aligned_cols=104 Identities=19% Similarity=0.147 Sum_probs=49.8
Q ss_pred HHHHHHHHcCCCcccceEEEecC-C-CCCCCCCcCcceeeecCcCCeEEEEccCCCCcccccccccccCChhhHHHHHHH
Q 003947 294 EMLLRIKQQGLDITPRILIITRL-L-PDAVGTTCGQRVEKVYGTKYSDILRVPFRTEEGIVRKWISRFEVWPYLETFTED 371 (784)
Q Consensus 294 eLa~~L~~~GheV~~~i~VvTr~-~-~~~~g~~~~~~~e~v~~~~~v~IlrvP~~~~~~~~~~~isr~~l~~yl~~f~~~ 371 (784)
+|++.|+++|++|. ++.-. . ....|.......+.....-.+-|+++|+....|.+..-.+...+.
T Consensus 15 ~~~~~l~~~g~~v~----~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~~~~~~~~i~~~~~~~~~~--------- 81 (287)
T TIGR02853 15 ELIRKLEELDAKIS----LIGFDQLEDGFTGAVKCELLELDLTTLDVVILPVPGTSHDGKVATVFSNEKVV--------- 81 (287)
T ss_pred HHHHHHHHCCCEEE----EEeccccccccccceeecchhhhhccCCEEEECCccccCCceEecccccCCcc---------
Confidence 68899999999998 66432 1 111121111122221222346788888877666433222222221
Q ss_pred HHHHHHHHcCCCceEEEEcCCChhHHHHHHHHhCCCcEEEEe
Q 003947 372 VATEIIQELQCKPDLIIGNYSDGNIVASLLAHKLDVTQCTIA 413 (784)
Q Consensus 372 ~~~~i~~~~~~~pDIIh~~~~~~~lva~llar~~gvp~V~t~ 413 (784)
+.+++++.+. +..+.+......-+. .+++..|++++...
T Consensus 82 l~~~~l~~~~--~~~~~~~G~~~~~l~-~~a~~~gi~v~~~~ 120 (287)
T TIGR02853 82 LTPELLESTK--GHCTIYVGISNPYLE-QLAADAGVKLIELF 120 (287)
T ss_pred ccHHHHHhcC--CCCEEEEecCCHHHH-HHHHHCCCeEEEEE
Confidence 1122333322 222333222222222 37778899876444
No 247
>TIGR01501 MthylAspMutase methylaspartate mutase, S subunit. This model represents the S (sigma) subunit of methylaspartate mutase (glutamate mutase), a cobalamin-dependent enzyme that catalyzes the first step in a pathway of glutamate fermentation.
Probab=23.36 E-value=1.9e+02 Score=27.78 Aligned_cols=21 Identities=24% Similarity=0.757 Sum_probs=14.8
Q ss_pred hHHHHHHHHhcCcccccCCch
Q 003947 202 YAEFEQKFQEIGLERGWGDNA 222 (784)
Q Consensus 202 ~~~~~~~~~~~~~~~~~g~~~ 222 (784)
+.+.+.+|+++||....|-.+
T Consensus 99 ~~~~~~~l~~~Gv~~vF~pgt 119 (134)
T TIGR01501 99 FPDVEKRFKEMGFDRVFAPGT 119 (134)
T ss_pred hHHHHHHHHHcCCCEEECcCC
Confidence 334556899999988777544
No 248
>PF13407 Peripla_BP_4: Periplasmic binding protein domain; PDB: 3BRS_B 3GBP_A 3GA5_A 1GCG_A 1GCA_A 3H75_A 3D02_A 3L49_B 3EJW_B 3T95_A ....
Probab=23.33 E-value=4.5e+02 Score=26.86 Aligned_cols=41 Identities=15% Similarity=0.218 Sum_probs=29.3
Q ss_pred HHHHHHcccc-EEEeCCCCCCCcHHHHHHHHcCCcEEEcCcc
Q 003947 633 LYRYICDTKG-AFVQPALYEAFGLTVVEAMTCGLPTFATCNG 673 (784)
Q Consensus 633 l~~~la~aad-vfV~PS~~E~fGltvlEAMA~GlPVIaT~~G 673 (784)
+-++++...| +++.|...+...-.+-++...|.|||..+.+
T Consensus 48 i~~~i~~~~d~Iiv~~~~~~~~~~~l~~~~~~gIpvv~~d~~ 89 (257)
T PF13407_consen 48 IEQAISQGVDGIIVSPVDPDSLAPFLEKAKAAGIPVVTVDSD 89 (257)
T ss_dssp HHHHHHTTESEEEEESSSTTTTHHHHHHHHHTTSEEEEESST
T ss_pred HHHHHHhcCCEEEecCCCHHHHHHHHHHHhhcCceEEEEecc
Confidence 3444444556 5556666667777788899999999998777
No 249
>PF03668 ATP_bind_2: P-loop ATPase protein family; InterPro: IPR005337 This entry represents UPF0042 nucleotide-binding proteins. This is a family of putative P-loop ATPases [], as they contain an ATP-binding site and display ATPase and GTPase activities.; GO: 0005524 ATP binding
Probab=22.87 E-value=2.5e+02 Score=30.52 Aligned_cols=119 Identities=18% Similarity=0.286 Sum_probs=67.8
Q ss_pred HHHHHHHHhccCCCceeeccccCCCHHHHHHHHHHHHHHhhcCCCCCChHHHHHHHHhcCcccccCCch-----------
Q 003947 154 QSLLEFLRVHSHMGKNMMLNEKIQDLGTLQSSLRMAEKYLSMLAPDTSYAEFEQKFQEIGLERGWGDNA----------- 222 (784)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~----------- 222 (784)
..+|.-||... .+.|+-.=-|+.+|+..|..... ..-+ +.+.-.++..||..|=-..|
T Consensus 122 r~~L~~lr~~A----d~vIDTs~l~~~~Lr~~i~~~~~--~~~~-----~~l~v~i~SFGfK~GiP~dAD~VfDvRfLpN 190 (284)
T PF03668_consen 122 RELLEPLRERA----DLVIDTSNLSVHQLRERIRERFG--GDKE-----SRLTVTIQSFGFKYGIPPDADLVFDVRFLPN 190 (284)
T ss_pred HHHHHHHHHhC----CEEEECCCCCHHHHHHHHHHHhc--cCCC-----CceEEEEEEeccccCCCCCCCEEEEcCcCCC
Confidence 34555555544 46677777788888888876432 1111 23444556666655533222
Q ss_pred ------------------------HHHHHHHHHHHHhhcCCCcchHhHHhcCCCcceEEEEEccCccccccCccCCCCcc
Q 003947 223 ------------------------EHVLGMIQLLLDLLQAPESSTLETFLGKIPRVFNVVIFTPHGYFAQDNVLGYPDTG 278 (784)
Q Consensus 223 ------------------------~~~~~~~~~~~~~~~~p~~~~~~~~~~~~p~~mkI~ivs~h~~~~~~~~lg~p~tG 278 (784)
.-+.|.+.-+.++++. .+..|..+--.-+.|+|= =||
T Consensus 191 P~y~~~Lr~lTG~D~~V~~yv~~~~~~~~f~~~~~~~l~~----~lp~y~~egk~~ltIaiG---------------CTG 251 (284)
T PF03668_consen 191 PYYVPELRPLTGLDKPVQDYVLSDPEAQEFLEKIEDLLDF----LLPRYEKEGKSYLTIAIG---------------CTG 251 (284)
T ss_pred CCCChhhhhcCCCChHHHHHHHcChhHHHHHHHHHHHHHH----HHHHHHhcCCceEEEEEE---------------cCC
Confidence 2233444444444432 244444433333455553 379
Q ss_pred cchhhhHHHHHHHHHHHHHHHHHcCCCcc
Q 003947 279 GQVVYILDQVRALENEMLLRIKQQGLDIT 307 (784)
Q Consensus 279 G~~vyv~d~~raLe~eLa~~L~~~GheV~ 307 (784)
|+...|. +++.|+++|++.|+.|.
T Consensus 252 G~HRSV~-----iae~La~~L~~~~~~v~ 275 (284)
T PF03668_consen 252 GQHRSVA-----IAERLAERLREKGYTVV 275 (284)
T ss_pred CcCcHHH-----HHHHHHHHHHhcCCcce
Confidence 9988877 55678999999999987
No 250
>COG2236 Predicted phosphoribosyltransferases [General function prediction only]
Probab=22.82 E-value=1.7e+02 Score=29.89 Aligned_cols=48 Identities=27% Similarity=0.414 Sum_probs=36.8
Q ss_pred hhhHHHHHHHHHHHHHHHcCCCceEEEEcCCChhHHHHHHHHhCCCcEE
Q 003947 362 WPYLETFTEDVATEIIQELQCKPDLIIGNYSDGNIVASLLAHKLDVTQC 410 (784)
Q Consensus 362 ~~yl~~f~~~~~~~i~~~~~~~pDIIh~~~~~~~lva~llar~~gvp~V 410 (784)
|..+......+++++.+. ..+||+|++-..-|...|.+++..++++-+
T Consensus 9 w~~I~~~~~~lA~kI~~s-~~~PDvIiaiaRGG~~pariLsd~L~~~~l 56 (192)
T COG2236 9 WEEIHRLCRALAEKIRAS-GFKPDVIVAIARGGLIPARILSDFLGVKPL 56 (192)
T ss_pred HHHHHHHHHHHHHHHHHc-CCCCCEEEEEcCCceehHHHHHHHhCCCce
Confidence 555666666777777654 679999999877777899999999998533
No 251
>COG2204 AtoC Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains [Signal transduction mechanisms]
Probab=22.80 E-value=1e+03 Score=27.83 Aligned_cols=108 Identities=16% Similarity=0.184 Sum_probs=70.9
Q ss_pred eEEEEEeCCCCCCcccHHHHHHHHHHHHHHHhcCCCCcEEEccCcCCcCChhHHHHHHHcc-ccEEEeCCC-CCCCcHHH
Q 003947 580 VNLVVVGGDRRKESKDLEEQAEMKKMYGLIDTYKLNGQFRWISSQMNRVRNGELYRYICDT-KGAFVQPAL-YEAFGLTV 657 (784)
Q Consensus 580 v~LvIVG~g~~~~s~d~ee~~~~~~l~~li~~l~L~~~V~flG~~~~~v~~~el~~~la~a-advfV~PS~-~E~fGltv 657 (784)
.+++||-+.. ...+.+.......|. .|+... +..+....+... .|+++.=-. .+.-|+.+
T Consensus 5 ~~iLvVDDd~----------~ir~~l~~~L~~~G~--~v~~a~------~~~~al~~i~~~~~~lvl~Di~mp~~~Gl~l 66 (464)
T COG2204 5 ARILVVDDDP----------DIRELLEQALELAGY--EVVTAE------SAEEALEALSESPFDLVLLDIRMPGMDGLEL 66 (464)
T ss_pred CCEEEEeCCH----------HHHHHHHHHHHHcCC--eEEEeC------CHHHHHHHHhcCCCCEEEEecCCCCCchHHH
Confidence 3566776552 233445555555552 344433 345667777654 355554332 46678998
Q ss_pred HHHHHc---CCcEEE-cCcccc---ccccccCceEEEECCCCHHHHHHHHHHHHH
Q 003947 658 VEAMTC---GLPTFA-TCNGGP---AEIIVHGKSGFHIDPYKGDQATGILVDFFE 705 (784)
Q Consensus 658 lEAMA~---GlPVIa-T~~GG~---~EiI~dg~~G~li~p~d~e~lAe~I~~~l~ 705 (784)
++.+.. ++|||. |.+|.+ .+-+..|-.-|+..|-|++.+...+.++++
T Consensus 67 l~~i~~~~~~~pVI~~Tg~g~i~~AV~A~k~GA~Dfl~KP~~~~~L~~~v~ral~ 121 (464)
T COG2204 67 LKEIKSRDPDLPVIVMTGHGDIDTAVEALRLGAFDFLEKPFDLDRLLAIVERALE 121 (464)
T ss_pred HHHHHhhCCCCCEEEEeCCCCHHHHHHHHhcCcceeeeCCCCHHHHHHHHHHHHH
Confidence 887766 699988 677775 455567888899999999999999987764
No 252
>COG1618 Predicted nucleotide kinase [Nucleotide transport and metabolism]
Probab=22.52 E-value=2.1e+02 Score=28.70 Aligned_cols=72 Identities=17% Similarity=0.226 Sum_probs=46.5
Q ss_pred hHHHHHHHccccEEEeCCC------CCCCcHHHHHHHHcCCcEEEcC-----ccccccccccCceEEE-ECCCCHHHHHH
Q 003947 631 GELYRYICDTKGAFVQPAL------YEAFGLTVVEAMTCGLPTFATC-----NGGPAEIIVHGKSGFH-IDPYKGDQATG 698 (784)
Q Consensus 631 ~el~~~la~aadvfV~PS~------~E~fGltvlEAMA~GlPVIaT~-----~GG~~EiI~dg~~G~l-i~p~d~e~lAe 698 (784)
..+.+.+.+ +|+.+.=-. .-.|.-.+-|.|-|++|+|||- .+...++-.-+ .-++ ++|.|-+.+.+
T Consensus 92 ~al~rA~~~-aDvIIIDEIGpMElks~~f~~~ve~vl~~~kpliatlHrrsr~P~v~~ik~~~-~v~v~lt~~NR~~i~~ 169 (179)
T COG1618 92 PALRRALEE-ADVIIIDEIGPMELKSKKFREAVEEVLKSGKPLIATLHRRSRHPLVQRIKKLG-GVYVFLTPENRNRILN 169 (179)
T ss_pred HHHHHHhhc-CCEEEEecccchhhccHHHHHHHHHHhcCCCcEEEEEecccCChHHHHhhhcC-CEEEEEccchhhHHHH
Confidence 356666674 888887422 2346666889999999999983 23344443333 3334 79999887777
Q ss_pred HHHHHH
Q 003947 699 ILVDFF 704 (784)
Q Consensus 699 ~I~~~l 704 (784)
.|...+
T Consensus 170 ~Il~~L 175 (179)
T COG1618 170 EILSVL 175 (179)
T ss_pred HHHHHh
Confidence 776443
No 253
>PRK13398 3-deoxy-7-phosphoheptulonate synthase; Provisional
Probab=22.46 E-value=9.8e+02 Score=25.68 Aligned_cols=111 Identities=13% Similarity=0.063 Sum_probs=68.2
Q ss_pred CEEEEEecccCCCChHHHHHHHHHhHccCCCeEEEEEeCCCC-C--CcccHHHHHHHHHHHHHHHhcCCCCcEEEccCcC
Q 003947 549 PILFTMARLDRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRR-K--ESKDLEEQAEMKKMYGLIDTYKLNGQFRWISSQM 625 (784)
Q Consensus 549 ~iIl~vGRL~~~Kgi~~LieA~~~l~~~~~~v~LvIVG~g~~-~--~s~d~ee~~~~~~l~~li~~l~L~~~V~flG~~~ 625 (784)
+.++.+| ..-....+.+++.+.++++.+ ..++.+|.-.+ + .+...-..+..+.+++.++++|++=-....
T Consensus 27 ~~~~iaG-PCsie~~~~~~~~A~~lk~~g--~~~~r~~~~kpRTs~~s~~G~g~~gl~~l~~~~~~~Gl~~~te~~---- 99 (266)
T PRK13398 27 EKIIIAG-PCAVESEEQMVKVAEKLKELG--VHMLRGGAFKPRTSPYSFQGLGEEGLKILKEVGDKYNLPVVTEVM---- 99 (266)
T ss_pred CEEEEEe-CCcCCCHHHHHHHHHHHHHcC--CCEEEEeeecCCCCCCccCCcHHHHHHHHHHHHHHcCCCEEEeeC----
Confidence 4444444 455678899999999999854 55777774332 1 122322345667788888999985322332
Q ss_pred CcCChhHHHHHHHccccEEEeCCC-CCCCcHHHH-HHHHcCCcEEEcCc
Q 003947 626 NRVRNGELYRYICDTKGAFVQPAL-YEAFGLTVV-EAMTCGLPTFATCN 672 (784)
Q Consensus 626 ~~v~~~el~~~la~aadvfV~PS~-~E~fGltvl-EAMA~GlPVIaT~~ 672 (784)
+... ..++.+..|++-.+|. .+. ..++ ++-..|+||+.++.
T Consensus 100 ---d~~~-~~~l~~~vd~~kIga~~~~n--~~LL~~~a~~gkPV~lk~G 142 (266)
T PRK13398 100 ---DTRD-VEEVADYADMLQIGSRNMQN--FELLKEVGKTKKPILLKRG 142 (266)
T ss_pred ---Chhh-HHHHHHhCCEEEECcccccC--HHHHHHHhcCCCcEEEeCC
Confidence 2222 3344445788888886 333 3344 44567999999754
No 254
>PRK03359 putative electron transfer flavoprotein FixA; Reviewed
Probab=22.27 E-value=2.4e+02 Score=30.16 Aligned_cols=34 Identities=24% Similarity=0.258 Sum_probs=26.3
Q ss_pred CceEEEEc--CCC--hhHHHHHHHHhCCCcEEEEecCC
Q 003947 383 KPDLIIGN--YSD--GNIVASLLAHKLDVTQCTIAHAL 416 (784)
Q Consensus 383 ~pDIIh~~--~~~--~~lva~llar~~gvp~V~t~H~l 416 (784)
.||+|.|- +.+ ++.++..+|..+|+|++..+-.+
T Consensus 112 ~~DLVl~G~~s~D~~tgqvg~~lAe~Lg~P~vt~v~~l 149 (256)
T PRK03359 112 GFDLILCGDGSSDLYAQQVGLLVGEILNIPAINGVSKI 149 (256)
T ss_pred CCCEEEEcCccccCCCCcHHHHHHHHhCCCceeeEEEE
Confidence 59999963 223 47899999999999998776654
No 255
>PRK14982 acyl-ACP reductase; Provisional
Probab=22.04 E-value=7.6e+02 Score=27.63 Aligned_cols=102 Identities=13% Similarity=0.101 Sum_probs=55.5
Q ss_pred HHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcCccccccccccC--c------eEEEECCCCHH-HHHHHHHH
Q 003947 632 ELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCNGGPAEIIVHG--K------SGFHIDPYKGD-QATGILVD 702 (784)
Q Consensus 632 el~~~la~aadvfV~PS~~E~fGltvlEAMA~GlPVIaT~~GG~~EiI~dg--~------~G~li~p~d~e-~lAe~I~~ 702 (784)
++.+.+.+ +|+++..+-.... .++.+.....|.+..|.+-++++-.+- . .|.+--|.|++ .+.+.+.
T Consensus 208 ~l~~~l~~-aDiVv~~ts~~~~--~~I~~~~l~~~~~viDiAvPRDVd~~v~~~~V~v~~gG~V~~p~~vd~~l~~~v~- 283 (340)
T PRK14982 208 SLEEALPE-ADIVVWVASMPKG--VEIDPETLKKPCLMIDGGYPKNLDTKVQGPGIHVLKGGIVEHSLDIDWKIMEIAE- 283 (340)
T ss_pred hHHHHHcc-CCEEEECCcCCcC--CcCCHHHhCCCeEEEEecCCCCCCcccCCCCEEEEeCCccccCCCcCccHHHHHh-
Confidence 45677775 8988876543221 123334447899999998887774321 1 13333467776 5433332
Q ss_pred HHHHhcCCHHHHHHHHHHH------HHHHHHhCCHHHH---HHHHHHHHH
Q 003947 703 FFEKCKVDPGHWDEISQGG------LKRIQEKYTWKIY---SERLLNLSG 743 (784)
Q Consensus 703 ~l~~ll~dp~~~~~m~~~a------~~~v~~~ytw~~~---a~~ll~ly~ 743 (784)
.+-..++..+..| .+-..++|||..- .++..++++
T Consensus 284 ------~~~~~r~~~Ac~AEtiiL~leg~~~~fS~Gr~~i~~~~v~~i~~ 327 (340)
T PRK14982 284 ------MDNPQRQMFACFAEAMLLEFEGCHTNFSWGRNQITLEKMEFIGE 327 (340)
T ss_pred ------ccchhhHHHHHHHHHHHHHhcCCccCCCcCccccCHHHHHHHHH
Confidence 1112222222222 2233478999843 677777665
No 256
>CHL00194 ycf39 Ycf39; Provisional
Probab=22.02 E-value=68 Score=34.83 Aligned_cols=33 Identities=9% Similarity=0.346 Sum_probs=24.8
Q ss_pred eEEEEEccCccccccCccCCCCcccchhhhHHHHHHHHHHHHHHHHHcCCCcccceEEEecC
Q 003947 255 FNVVIFTPHGYFAQDNVLGYPDTGGQVVYILDQVRALENEMLLRIKQQGLDITPRILIITRL 316 (784)
Q Consensus 255 mkI~ivs~h~~~~~~~~lg~p~tGG~~vyv~d~~raLe~eLa~~L~~~GheV~~~i~VvTr~ 316 (784)
|||+++...|+.| + .++++|.++||+|. +++|.
T Consensus 1 MkIlVtGatG~iG-----------~--------------~lv~~Ll~~g~~V~----~l~R~ 33 (317)
T CHL00194 1 MSLLVIGATGTLG-----------R--------------QIVRQALDEGYQVR----CLVRN 33 (317)
T ss_pred CEEEEECCCcHHH-----------H--------------HHHHHHHHCCCeEE----EEEcC
Confidence 6899887777633 1 45667789999998 88876
No 257
>PRK10840 transcriptional regulator RcsB; Provisional
Probab=22.02 E-value=8e+02 Score=24.49 Aligned_cols=74 Identities=12% Similarity=0.138 Sum_probs=48.5
Q ss_pred hHHHHHHH-ccccEEEeCCCCCC----CcHHHHHHHH---cCCcEEE-cCcccc---ccccccCceEEEECCCCHHHHHH
Q 003947 631 GELYRYIC-DTKGAFVQPALYEA----FGLTVVEAMT---CGLPTFA-TCNGGP---AEIIVHGKSGFHIDPYKGDQATG 698 (784)
Q Consensus 631 ~el~~~la-~aadvfV~PS~~E~----fGltvlEAMA---~GlPVIa-T~~GG~---~EiI~dg~~G~li~p~d~e~lAe 698 (784)
.+....+. ...|++++-....+ -|+.+++.+. .++|+|+ |..... .+.+..|..||+..|.+++++.+
T Consensus 39 ~~~~~~~~~~~~DlvllD~~l~~~~~~~g~~~~~~l~~~~~~~~iIvls~~~~~~~~~~a~~~Ga~~yl~K~~~~~~l~~ 118 (216)
T PRK10840 39 TALINNLPKLDAHVLITDLSMPGDKYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPK 118 (216)
T ss_pred HHHHHHHHhCCCCEEEEeCcCCCCCCCCHHHHHHHHHHHCCCCcEEEEEecCCHHHHHHHHHCCCeEEEECCCCHHHHHH
Confidence 45555543 23688877543332 5777777664 3567776 433332 34467789999999999999999
Q ss_pred HHHHHH
Q 003947 699 ILVDFF 704 (784)
Q Consensus 699 ~I~~~l 704 (784)
+|....
T Consensus 119 ai~~v~ 124 (216)
T PRK10840 119 ALAALQ 124 (216)
T ss_pred HHHHHH
Confidence 987654
No 258
>COG0482 TrmU Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain [Translation, ribosomal structure and biogenesis]
Probab=21.88 E-value=1.6e+02 Score=33.12 Aligned_cols=106 Identities=18% Similarity=0.148 Sum_probs=53.8
Q ss_pred cccchhhhHHHHHHHHHHHHHHHHHcCCCcccceEEEecCCCC-CCCCCcCcc-----eeeecCcCCeEEEEccCCCCcc
Q 003947 277 TGGQVVYILDQVRALENEMLLRIKQQGLDITPRILIITRLLPD-AVGTTCGQR-----VEKVYGTKYSDILRVPFRTEEG 350 (784)
Q Consensus 277 tGG~~vyv~d~~raLe~eLa~~L~~~GheV~~~i~VvTr~~~~-~~g~~~~~~-----~e~v~~~~~v~IlrvP~~~~~~ 350 (784)
+||.--.|. |.-|+++||+|. -++..... ..+..|... .+.+...-|+.+..+.|
T Consensus 11 SGGVDSSVa----------A~lLk~QGyeVi----Gl~m~~~~~~~~~~C~s~~d~~da~~va~~LGIp~~~vdf----- 71 (356)
T COG0482 11 SGGVDSSVA----------AYLLKEQGYEVI----GLFMKNWDEDGGGGCCSEEDLRDAERVADQLGIPLYVVDF----- 71 (356)
T ss_pred cCCHHHHHH----------HHHHHHcCCeEE----EEEEEeeccCCCCcCCchhHHHHHHHHHHHhCCceEEEch-----
Confidence 477655544 345899999998 66554332 222233321 23333333444444443
Q ss_pred cccccccccCChhhHHHHHHHHHHHHHHHc----CCCceEEEEcCCChhHHHHHHHHhCCCcEEEEecCC
Q 003947 351 IVRKWISRFEVWPYLETFTEDVATEIIQEL----QCKPDLIIGNYSDGNIVASLLAHKLDVTQCTIAHAL 416 (784)
Q Consensus 351 ~~~~~isr~~l~~yl~~f~~~~~~~i~~~~----~~~pDIIh~~~~~~~lva~llar~~gvp~V~t~H~l 416 (784)
.+.|...+...+.... --.|||.-.+...... +.-.+..+|.-.+.|-|=.
T Consensus 72 --------------~~~y~~~V~~~f~~~Y~~G~TPNPci~CN~~iKF~~-~l~~a~~lgad~iATGHYa 126 (356)
T COG0482 72 --------------EKEFWNKVFEYFLAEYKAGKTPNPCILCNKEIKFKA-LLDYAKELGADYIATGHYA 126 (356)
T ss_pred --------------HHHHHHHHHHHHHHHHhCCCCCCcchhcCHHHHHHH-HHHHHHHcCCCeEEEeeeE
Confidence 3344444444444433 2358844333333322 2333444888899999853
No 259
>PTZ00254 40S ribosomal protein SA; Provisional
Probab=21.55 E-value=3.3e+02 Score=29.10 Aligned_cols=109 Identities=15% Similarity=0.149 Sum_probs=58.8
Q ss_pred CCChHHHHHHHHHhHccCCCeEEEEEeCCCCCCcccHHHHHHHHHHHHHHHhcCC---CCcEEEcc-CcCCcCChhHHHH
Q 003947 560 VKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYGLIDTYKL---NGQFRWIS-SQMNRVRNGELYR 635 (784)
Q Consensus 560 ~Kgi~~LieA~~~l~~~~~~v~LvIVG~g~~~~s~d~ee~~~~~~l~~li~~l~L---~~~V~flG-~~~~~v~~~el~~ 635 (784)
.|=...|..|+.-+......-.+++||..+. ..+.+.+.++..|- .+ +|+| .-++... .
T Consensus 52 ~kT~~~L~~Aa~~i~~i~~~~~Il~Vstr~~----------~~~~V~k~A~~tg~~~i~~--Rw~pGtlTN~~~-----~ 114 (249)
T PTZ00254 52 AKTWEKLKLAARVIAAIENPADVVVVSSRPY----------GQRAVLKFAQYTGASAIAG--RFTPGTFTNQIQ-----K 114 (249)
T ss_pred HHHHHHHHHHHHHHHHHhCCCcEEEEEcCHH----------HHHHHHHHHHHhCCeEECC--cccCCCCCCccc-----c
Confidence 4444555555544433223456788887753 12334455554443 23 6776 2233221 1
Q ss_pred HHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEc-CccccccccccCceEEEECCCC
Q 003947 636 YICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFAT-CNGGPAEIIVHGKSGFHIDPYK 692 (784)
Q Consensus 636 ~la~aadvfV~PS~~E~fGltvlEAMA~GlPVIaT-~~GG~~EiI~dg~~G~li~p~d 692 (784)
.+.. =|++|+..- -.=..++.||-.+|.|||+- |.....+.| -+.||-+|
T Consensus 115 ~f~~-P~llIV~Dp-~~d~qAI~EA~~lnIPvIal~DTds~p~~V-----Dy~IP~Nd 165 (249)
T PTZ00254 115 KFME-PRLLIVTDP-RTDHQAIREASYVNIPVIALCDTDSPLEYV-----DIAIPCNN 165 (249)
T ss_pred ccCC-CCEEEEeCC-CcchHHHHHHHHhCCCEEEEecCCCCcccC-----ceeeCCCC
Confidence 1221 344444321 22246899999999999995 565666665 35676655
No 260
>PRK08229 2-dehydropantoate 2-reductase; Provisional
Probab=21.53 E-value=74 Score=34.97 Aligned_cols=19 Identities=32% Similarity=0.403 Sum_probs=15.1
Q ss_pred HHHHHHHHcCCCcccceEEEecC
Q 003947 294 EMLLRIKQQGLDITPRILIITRL 316 (784)
Q Consensus 294 eLa~~L~~~GheV~~~i~VvTr~ 316 (784)
.++..|++.||+|+ ++.+.
T Consensus 16 ~~A~~L~~~G~~V~----~~~r~ 34 (341)
T PRK08229 16 YLGGRLAAAGADVT----LIGRA 34 (341)
T ss_pred HHHHHHHhcCCcEE----EEecH
Confidence 46677899999998 88763
No 261
>PF06377 Adipokin_hormo: Adipokinetic hormone; InterPro: IPR010475 This family consists of several insect adipokinetic hormone as well as the related crustacean red pigment concentrating hormone (RPCH) []. Flight activity of insects comprises one of the most intense biochemical processes known in nature, and therefore provides an attractive model system to study the hormonal regulation of metabolism during physical exercise. In long-distance flying insects, such as the migratory locust, both carbohydrate and lipid reserves are utilised as fuels for sustained flight activity. The mobilisation of these energy stores in Locusta migratoria (Migratory locust) is mediated by three structurally related adipokinetic hormones (AKHs), which are all capable of stimulating the release of both carbohydrates and lipids from the fat body [].; GO: 0005179 hormone activity
Probab=21.02 E-value=36 Score=26.78 Aligned_cols=14 Identities=21% Similarity=0.774 Sum_probs=11.2
Q ss_pred cCcccccCCchHHH
Q 003947 212 IGLERGWGDNAEHV 225 (784)
Q Consensus 212 ~~~~~~~g~~~~~~ 225 (784)
|.|-||||.-++..
T Consensus 2 LnFSp~WGKRs~~~ 15 (48)
T PF06377_consen 2 LNFSPGWGKRSAGA 15 (48)
T ss_pred cccCCCcccccccC
Confidence 67999999887664
No 262
>PF02571 CbiJ: Precorrin-6x reductase CbiJ/CobK; InterPro: IPR003723 Cobalamin (vitamin B12) is a structurally complex cofactor, consisting of a modified tetrapyrrole with a centrally chelated cobalt. Cobalamin is usually found in one of two biologically active forms: methylcobalamin and adocobalamin. Most prokaryotes, as well as animals, have cobalamin-dependent enzymes, whereas plants and fungi do not appear to use it. In bacteria and archaea, these include methionine synthase, ribonucleotide reductase, glutamate and methylmalonyl-CoA mutases, ethanolamine ammonia lyase, and diol dehydratase []. In mammals, cobalamin is obtained through the diet, and is required for methionine synthase and methylmalonyl-CoA mutase []. There are at least two distinct cobalamin biosynthetic pathways in bacteria []: Aerobic pathway that requires oxygen and in which cobalt is inserted late in the pathway []; found in Pseudomonas denitrificans and Rhodobacter capsulatus. Anaerobic pathway in which cobalt insertion is the first committed step towards cobalamin synthesis []; found in Salmonella typhimurium, Bacillus megaterium, and Propionibacterium freudenreichii subsp. shermanii. Either pathway can be divided into two parts: (1) corrin ring synthesis (differs in aerobic and anaerobic pathways) and (2) adenosylation of corrin ring, attachment of aminopropanol arm, and assembly of the nucleotide loop (common to both pathways) []. There are about 30 enzymes involved in either pathway, where those involved in the aerobic pathway are prefixed Cob and those of the anaerobic pathway Cbi. Several of these enzymes are pathway-specific: CbiD, CbiG, and CbiK are specific to the anaerobic route of S. typhimurium, whereas CobE, CobF, CobG, CobN, CobS, CobT, and CobW are unique to the aerobic pathway of P. denitrificans. This entry represents CobK and CbiJ precorrin-6x reductase (1.3.1.54 from EC). In the aerobic pathway, CobK catalyses the reduction of the macrocycle of precorrin-6X to produce precorrin-6Y; while in the anaerobic pathway CbiJ catalyses the reduction of the macrocycle of cobalt-precorrin-6X into cobalt-precorrin-6Y [, ].; GO: 0016994 precorrin-6A reductase activity, 0009236 cobalamin biosynthetic process, 0055114 oxidation-reduction process
Probab=21.01 E-value=3.3e+02 Score=28.97 Aligned_cols=35 Identities=14% Similarity=0.109 Sum_probs=24.5
Q ss_pred ccEEEeCC-CCCCCcHHHHHHHHcCCcEEEcCcccc
Q 003947 641 KGAFVQPA-LYEAFGLTVVEAMTCGLPTFATCNGGP 675 (784)
Q Consensus 641 advfV~PS-~~E~fGltvlEAMA~GlPVIaT~~GG~ 675 (784)
+|++|.=- -..|+.-++--|..+|+|||.-.-+-.
T Consensus 195 i~~lVtK~SG~~g~~eKi~AA~~lgi~vivI~RP~~ 230 (249)
T PF02571_consen 195 IDVLVTKESGGSGFDEKIEAARELGIPVIVIKRPPE 230 (249)
T ss_pred CCEEEEcCCCchhhHHHHHHHHHcCCeEEEEeCCCC
Confidence 56666532 233677788999999999998765543
No 263
>COG1879 RbsB ABC-type sugar transport system, periplasmic component [Carbohydrate transport and metabolism]
Probab=20.95 E-value=1e+03 Score=25.41 Aligned_cols=46 Identities=17% Similarity=0.268 Sum_probs=34.3
Q ss_pred HHHHHHHcccc-EEEeCCCCCCCcHHHHHHHHcCCcEEEcCcccccc
Q 003947 632 ELYRYICDTKG-AFVQPALYEAFGLTVVEAMTCGLPTFATCNGGPAE 677 (784)
Q Consensus 632 el~~~la~aad-vfV~PS~~E~fGltvlEAMA~GlPVIaT~~GG~~E 677 (784)
.+..+++...| +.|.|....++.-.+-+|...|.|||+-+......
T Consensus 83 ~i~~~ia~~~daIiv~~~d~~~~~~~v~~a~~aGIpVv~~d~~~~~~ 129 (322)
T COG1879 83 QIEDLIAQGVDAIIINPVDPDALTPAVKKAKAAGIPVVTVDSDIPGP 129 (322)
T ss_pred HHHHHHHcCCCEEEEcCCChhhhHHHHHHHHHCCCcEEEEecCCCCC
Confidence 45555655565 55556778888889999999999999987765543
No 264
>PRK05331 putative phosphate acyltransferase; Provisional
Probab=20.79 E-value=1.1e+03 Score=26.24 Aligned_cols=52 Identities=12% Similarity=0.050 Sum_probs=37.7
Q ss_pred ccCCCChHHHHHHHHHhHccCCCeEEEEEeCCCCCCcccHHHHHHHHHHHHHHHhcCCC-CcEEEcc
Q 003947 557 LDRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYGLIDTYKLN-GQFRWIS 622 (784)
Q Consensus 557 L~~~Kgi~~LieA~~~l~~~~~~v~LvIVG~g~~~~s~d~ee~~~~~~l~~li~~l~L~-~~V~flG 622 (784)
+.-..+...++++..+..+..+.+.++++|+. +.+++.++++++. +++.++-
T Consensus 9 mGgD~~p~~vl~aa~~a~~~~~~~~~iLvG~~--------------~~I~~~l~~~~~~~~~~~Iv~ 61 (334)
T PRK05331 9 MGGDFGPEVVVPGALQALKEHPDLEIILVGDE--------------EKIKPLLAKKPDLKERIEIVH 61 (334)
T ss_pred CCCccCHHHHHHHHHHHHhcCCCeEEEEEeCH--------------HHHHHHHHhcCCCcCCcEEEe
Confidence 44578899999998887776677999999975 4456666666643 4566664
No 265
>PLN02327 CTP synthase
Probab=20.68 E-value=9.2e+02 Score=28.87 Aligned_cols=107 Identities=14% Similarity=0.171 Sum_probs=66.5
Q ss_pred ChHHHHHHHHHhHccCCCeEEEEEeCCCCCCcccHHHHHHHHHHHHHHHhcCCCCcEEEccCcCCcCCh----------h
Q 003947 562 NLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYGLIDTYKLNGQFRWISSQMNRVRN----------G 631 (784)
Q Consensus 562 gi~~LieA~~~l~~~~~~v~LvIVG~g~~~~s~d~ee~~~~~~l~~li~~l~L~~~V~flG~~~~~v~~----------~ 631 (784)
++....+...++......+++-+||.-.+ -...+.+..+.+......++..=.+.|+.+.. +.. .
T Consensus 280 ~~~~W~~~~~~~~~~~~~v~IalVGKY~~---l~DAY~Si~eAL~hA~~~~~~~v~i~wI~se~--l~~~~~~~~~~~y~ 354 (557)
T PLN02327 280 DLEEWTARAESCDNLTEPVRIAMVGKYTG---LSDSYLSVLKALLHASVACSRKLVIDWVAASD--LEDETAKETPDAYA 354 (557)
T ss_pred ChHHHHHHHHHHhCCCCceEEEEEecccC---CcHhHHHHHHHHHHHHHHcCCeeEEEEEchhh--cCCcccccccchhh
Confidence 34444444444444345699999997643 11235666677777777788887899986432 111 1
Q ss_pred HHHHHHHccccEEEeCCCC-----CCCcHHHHHHHHcCCcEEEcCccc
Q 003947 632 ELYRYICDTKGAFVQPALY-----EAFGLTVVEAMTCGLPTFATCNGG 674 (784)
Q Consensus 632 el~~~la~aadvfV~PS~~-----E~fGltvlEAMA~GlPVIaT~~GG 674 (784)
.+...+.+ +|.+++|.-+ |+.-..+-.|...|+|+++.+.|-
T Consensus 355 ~~~~~L~~-~DGIvvpGGfG~~~~~G~i~ai~~are~~iP~LGIClGm 401 (557)
T PLN02327 355 AAWKLLKG-ADGILVPGGFGDRGVEGKILAAKYARENKVPYLGICLGM 401 (557)
T ss_pred hhHHhhcc-CCEEEeCCCCCCcccccHHHHHHHHHHcCCCEEEEcHHH
Confidence 24456775 7888888632 222233456667899999998873
No 266
>PRK05331 putative phosphate acyltransferase; Provisional
Probab=20.01 E-value=8.8e+02 Score=26.96 Aligned_cols=34 Identities=15% Similarity=0.152 Sum_probs=21.7
Q ss_pred EEEEecccCCCChHHHHHHHHHhHccCCCeEEEEEeC
Q 003947 551 LFTMARLDRVKNLTGLVEWYGKNAKLRELVNLVVVGG 587 (784)
Q Consensus 551 Il~vGRL~~~Kgi~~LieA~~~l~~~~~~v~LvIVG~ 587 (784)
++.+|.- ..||.+...+|+..+++..++ |-+.|.
T Consensus 179 lLn~Gse-~~kg~~~~~eA~~Ll~~~~~~--l~f~G~ 212 (334)
T PRK05331 179 LLNIGEE-EIKGNELVKEAYELLKAADSS--INFIGN 212 (334)
T ss_pred EEeCCCC-CCCCCHHHHHHHHHHHccCCC--ceEEee
Confidence 4555443 468888888888888654333 456663
Done!