Query 003952
Match_columns 784
No_of_seqs 440 out of 3076
Neff 7.9
Searched_HMMs 46136
Date Thu Mar 28 14:54:54 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/003952.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/003952hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0209 P-type ATPase [Inorgan 100.0 1E-183 3E-188 1501.7 51.4 771 3-784 3-788 (1160)
2 TIGR01657 P-ATPase-V P-type AT 100.0 2E-119 5E-124 1108.7 75.1 719 52-784 17-783 (1054)
3 KOG0208 Cation transport ATPas 100.0 7E-121 1E-125 1026.8 55.9 714 53-784 41-834 (1140)
4 COG0474 MgtA Cation transport 100.0 1.6E-87 3.5E-92 811.8 39.6 577 155-767 33-651 (917)
5 TIGR01523 ATPase-IID_K-Na pota 100.0 2.4E-84 5.3E-89 791.2 49.2 541 152-716 12-688 (1053)
6 KOG0202 Ca2+ transporting ATPa 100.0 2.2E-83 4.8E-88 715.2 33.0 596 150-767 7-690 (972)
7 PRK10517 magnesium-transportin 100.0 1.7E-81 3.7E-86 757.2 49.4 555 152-767 54-650 (902)
8 TIGR01524 ATPase-IIIB_Mg magne 100.0 8.1E-81 1.8E-85 751.7 52.6 555 152-767 20-615 (867)
9 TIGR01517 ATPase-IIB_Ca plasma 100.0 6.7E-81 1.5E-85 761.0 48.7 563 153-767 45-681 (941)
10 PRK15122 magnesium-transportin 100.0 4.4E-80 9.4E-85 746.1 51.4 564 151-767 31-650 (903)
11 TIGR01522 ATPase-IIA2_Ca golgi 100.0 3.3E-80 7.2E-85 750.6 48.9 517 151-718 8-572 (884)
12 TIGR01647 ATPase-IIIA_H plasma 100.0 1E-79 2.2E-84 733.4 47.7 472 165-715 1-483 (755)
13 TIGR01106 ATPase-IIC_X-K sodiu 100.0 1.9E-79 4.1E-84 750.3 49.2 528 152-716 22-610 (997)
14 KOG0204 Calcium transporting A 100.0 1.1E-75 2.3E-80 652.6 31.9 555 167-767 121-751 (1034)
15 TIGR01116 ATPase-IIA1_Ca sarco 100.0 3.4E-74 7.4E-79 699.6 46.1 501 194-717 1-580 (917)
16 TIGR01652 ATPase-Plipid phosph 100.0 2.6E-68 5.6E-73 658.1 47.0 580 178-784 1-749 (1057)
17 PRK14010 potassium-transportin 100.0 4.5E-66 9.7E-71 597.5 42.1 422 240-767 87-516 (673)
18 PRK01122 potassium-transportin 100.0 4.3E-65 9.3E-70 589.9 41.2 427 235-767 82-520 (679)
19 PLN03190 aminophospholipid tra 100.0 3.2E-64 7E-69 616.0 48.4 585 176-784 85-852 (1178)
20 TIGR01497 kdpB K+-transporting 100.0 1.6E-62 3.4E-67 567.2 41.9 431 234-767 82-521 (675)
21 KOG0205 Plasma membrane H+-tra 100.0 2.5E-63 5.5E-68 537.6 20.4 543 149-767 20-597 (942)
22 COG2217 ZntA Cation transport 100.0 4.1E-60 8.9E-65 548.0 39.0 432 219-767 174-612 (713)
23 KOG0203 Na+/K+ ATPase, alpha s 100.0 1.4E-61 3E-66 539.2 15.4 533 151-718 43-634 (1019)
24 TIGR01494 ATPase_P-type ATPase 100.0 1.3E-58 2.8E-63 532.5 39.8 392 242-767 22-419 (499)
25 PRK11033 zntA zinc/cadmium/mer 100.0 8.9E-58 1.9E-62 543.3 39.5 427 220-767 207-641 (741)
26 TIGR01525 ATPase-IB_hvy heavy 100.0 1.9E-56 4.1E-61 519.6 39.6 438 217-768 16-461 (556)
27 TIGR01512 ATPase-IB2_Cd heavy 100.0 9.7E-56 2.1E-60 510.7 37.3 426 207-768 7-439 (536)
28 KOG0210 P-type ATPase [Inorgan 100.0 1.4E-55 3E-60 479.6 30.5 557 173-778 74-754 (1051)
29 TIGR01511 ATPase-IB1_Cu copper 100.0 5.4E-55 1.2E-59 506.2 37.0 421 218-768 53-480 (562)
30 PRK10671 copA copper exporting 100.0 4.1E-54 8.8E-59 521.5 40.3 431 222-767 289-725 (834)
31 KOG0207 Cation transport ATPas 100.0 1.9E-55 4E-60 498.1 25.4 426 237-766 359-797 (951)
32 KOG0206 P-type ATPase [General 100.0 4.6E-50 1E-54 475.5 27.3 573 174-771 28-757 (1151)
33 COG2216 KdpB High-affinity K+ 100.0 3.5E-43 7.5E-48 374.2 27.3 417 245-767 95-522 (681)
34 PF00122 E1-E2_ATPase: E1-E2 A 100.0 1E-32 2.2E-37 286.2 20.0 219 227-479 4-229 (230)
35 PF00702 Hydrolase: haloacid d 99.7 1.6E-18 3.4E-23 177.2 4.1 206 484-768 1-209 (215)
36 PF13246 Hydrolase_like2: Puta 99.2 5.3E-12 1.2E-16 110.8 4.8 85 529-617 1-91 (91)
37 PF00690 Cation_ATPase_N: Cati 98.6 9.1E-08 2E-12 79.4 5.2 61 152-212 6-68 (69)
38 smart00831 Cation_ATPase_N Cat 98.3 1.2E-06 2.6E-11 71.6 5.2 51 164-214 9-60 (64)
39 PF12409 P5-ATPase: P5-type AT 97.8 2.8E-05 6.2E-10 71.8 6.0 57 53-112 19-75 (119)
40 COG4087 Soluble P-type ATPase 96.0 0.013 2.8E-07 53.7 5.4 88 663-768 19-107 (152)
41 COG0560 SerB Phosphoserine pho 95.4 0.038 8.3E-07 56.5 6.9 50 673-722 76-125 (212)
42 KOG1615 Phosphoserine phosphat 95.4 0.036 7.8E-07 54.4 6.3 42 674-715 88-129 (227)
43 PF12710 HAD: haloacid dehalog 95.1 0.024 5.1E-07 56.5 4.4 40 677-716 92-131 (192)
44 TIGR01488 HAD-SF-IB Haloacid D 93.6 0.17 3.7E-06 49.7 6.7 42 674-715 73-114 (177)
45 PLN02954 phosphoserine phospha 93.1 0.24 5.2E-06 50.8 7.1 41 674-714 84-124 (224)
46 TIGR00338 serB phosphoserine p 93.0 0.27 5.9E-06 50.2 7.4 42 674-715 85-126 (219)
47 TIGR02137 HSK-PSP phosphoserin 93.0 0.24 5.3E-06 50.2 6.8 41 674-715 68-108 (203)
48 TIGR01489 DKMTPPase-SF 2,3-dik 92.2 0.5 1.1E-05 46.6 7.9 96 673-768 71-176 (188)
49 TIGR01544 HAD-SF-IE haloacid d 89.7 1 2.2E-05 47.9 7.5 48 673-720 120-167 (277)
50 PRK09552 mtnX 2-hydroxy-3-keto 89.4 1.8 4E-05 44.3 9.2 41 674-715 74-114 (219)
51 PRK11009 aphA acid phosphatase 89.4 0.85 1.8E-05 47.4 6.6 81 673-769 113-199 (237)
52 PRK13222 phosphoglycolate phos 89.2 1 2.2E-05 46.0 7.2 49 673-721 92-140 (226)
53 cd01427 HAD_like Haloacid deha 89.1 0.67 1.4E-05 42.4 5.2 46 670-715 20-65 (139)
54 TIGR03333 salvage_mtnX 2-hydro 88.7 1.8 3.9E-05 44.2 8.5 41 673-713 69-109 (214)
55 TIGR01672 AphA HAD superfamily 88.0 1.3 2.9E-05 46.0 7.0 81 675-769 115-199 (237)
56 PRK10826 2-deoxyglucose-6-phos 88.0 1.3 2.8E-05 45.4 6.9 49 673-721 91-139 (222)
57 PRK11133 serB phosphoserine ph 87.8 1 2.2E-05 49.1 6.3 43 673-715 180-222 (322)
58 TIGR01454 AHBA_synth_RP 3-amin 87.1 1.4 3E-05 44.5 6.5 49 673-721 74-122 (205)
59 PRK13288 pyrophosphatase PpaX; 86.8 1.3 2.9E-05 44.9 6.2 49 674-722 82-130 (214)
60 TIGR01449 PGP_bact 2-phosphogl 86.6 1.7 3.7E-05 43.9 6.8 48 674-721 85-132 (213)
61 PRK13582 thrH phosphoserine ph 86.0 1.9 4.1E-05 43.4 6.7 41 674-715 68-108 (205)
62 COG0546 Gph Predicted phosphat 85.9 2.7 5.8E-05 43.1 7.8 89 672-769 87-177 (220)
63 PRK08238 hypothetical protein; 85.1 2.2 4.8E-05 49.1 7.4 40 674-713 72-111 (479)
64 PRK13223 phosphoglycolate phos 84.4 2.3 5E-05 45.2 6.7 49 673-721 100-148 (272)
65 TIGR01548 HAD-SF-IA-hyp1 haloa 83.7 2.9 6.4E-05 41.9 6.8 50 672-721 104-153 (197)
66 TIGR01490 HAD-SF-IB-hyp1 HAD-s 83.5 1.2 2.6E-05 44.7 4.0 43 672-714 85-127 (202)
67 TIGR01428 HAD_type_II 2-haloal 82.2 2.9 6.3E-05 41.8 6.2 48 674-721 92-139 (198)
68 TIGR01491 HAD-SF-IB-PSPlk HAD- 82.1 2.1 4.5E-05 42.7 5.1 41 674-714 80-120 (201)
69 TIGR01533 lipo_e_P4 5'-nucleot 81.5 4.5 9.8E-05 42.8 7.4 82 672-769 116-203 (266)
70 TIGR03351 PhnX-like phosphonat 81.2 5.7 0.00012 40.4 8.0 50 673-722 86-137 (220)
71 PRK13226 phosphoglycolate phos 79.8 4.2 9.1E-05 41.9 6.5 48 674-721 95-142 (229)
72 TIGR01422 phosphonatase phosph 79.7 6.3 0.00014 41.2 7.9 43 674-716 99-141 (253)
73 TIGR02253 CTE7 HAD superfamily 79.0 5.8 0.00012 40.3 7.2 48 674-721 94-141 (221)
74 PRK13225 phosphoglycolate phos 77.9 5.2 0.00011 42.6 6.6 48 674-721 142-189 (273)
75 TIGR02461 osmo_MPG_phos mannos 77.9 2.9 6.3E-05 43.1 4.6 43 672-714 13-55 (225)
76 TIGR01670 YrbI-phosphatas 3-de 77.9 2.7 5.9E-05 40.5 4.1 33 682-714 36-68 (154)
77 PRK01158 phosphoglycolate phos 77.7 2.8 6E-05 43.0 4.4 41 674-714 20-60 (230)
78 TIGR01509 HAD-SF-IA-v3 haloaci 77.2 8.8 0.00019 37.4 7.7 47 674-721 85-131 (183)
79 PLN03243 haloacid dehalogenase 76.7 5.7 0.00012 41.9 6.5 48 674-721 109-156 (260)
80 TIGR00099 Cof-subfamily Cof su 75.5 4.1 8.9E-05 42.7 5.0 41 674-714 16-56 (256)
81 PLN02770 haloacid dehalogenase 75.0 7.3 0.00016 40.7 6.7 48 674-721 108-155 (248)
82 TIGR01487 SPP-like sucrose-pho 74.1 3.8 8.2E-05 41.7 4.2 41 674-714 18-58 (215)
83 COG0561 Cof Predicted hydrolas 74.0 4 8.8E-05 42.9 4.5 41 675-715 21-61 (264)
84 PF13344 Hydrolase_6: Haloacid 73.9 1.8 3.8E-05 38.7 1.5 48 667-714 7-57 (101)
85 PHA03398 viral phosphatase sup 73.8 7.5 0.00016 41.5 6.3 47 675-721 148-195 (303)
86 TIGR01545 YfhB_g-proteo haloac 73.8 6.7 0.00014 40.0 5.9 42 674-715 94-136 (210)
87 PRK10513 sugar phosphate phosp 73.7 4.5 9.7E-05 42.7 4.8 42 673-714 19-60 (270)
88 TIGR01662 HAD-SF-IIIA HAD-supe 73.6 5.1 0.00011 37.2 4.6 42 673-714 24-73 (132)
89 PRK00192 mannosyl-3-phosphogly 73.3 4.3 9.4E-05 43.0 4.6 42 673-714 20-61 (273)
90 TIGR01486 HAD-SF-IIB-MPGP mann 72.9 4.6 0.0001 42.3 4.6 40 675-714 17-56 (256)
91 PRK10976 putative hydrolase; P 72.8 4.4 9.6E-05 42.6 4.5 42 673-714 18-59 (266)
92 PRK15126 thiamin pyrimidine py 72.3 4.7 0.0001 42.6 4.6 42 673-714 18-59 (272)
93 PRK10530 pyridoxal phosphate ( 72.2 5.4 0.00012 42.0 5.0 41 674-714 20-60 (272)
94 TIGR01482 SPP-subfamily Sucros 72.0 5.4 0.00012 40.7 4.8 41 674-714 15-55 (225)
95 TIGR02009 PGMB-YQAB-SF beta-ph 71.9 7.9 0.00017 37.9 5.8 47 673-721 87-133 (185)
96 PF13419 HAD_2: Haloacid dehal 71.9 6.2 0.00014 37.7 5.0 48 674-721 77-124 (176)
97 PRK14988 GMP/IMP nucleotidase; 71.3 9.7 0.00021 39.1 6.5 49 673-721 92-140 (224)
98 TIGR01675 plant-AP plant acid 71.3 14 0.0003 38.2 7.4 90 672-770 118-212 (229)
99 PLN02645 phosphoglycolate phos 70.4 5.3 0.00011 43.4 4.5 55 667-721 37-94 (311)
100 TIGR01684 viral_ppase viral ph 70.4 10 0.00022 40.5 6.3 47 675-721 146-193 (301)
101 PRK13478 phosphonoacetaldehyde 70.3 19 0.0004 38.0 8.6 43 673-715 100-142 (267)
102 TIGR01990 bPGM beta-phosphoglu 70.3 9.2 0.0002 37.5 5.9 47 673-721 86-132 (185)
103 PRK03669 mannosyl-3-phosphogly 70.2 6.3 0.00014 41.8 4.9 41 674-714 24-64 (271)
104 TIGR01458 HAD-SF-IIA-hyp3 HAD- 69.9 5.8 0.00013 41.8 4.6 55 667-721 10-71 (257)
105 TIGR02726 phenyl_P_delta pheny 69.7 4.9 0.00011 39.5 3.7 34 681-714 41-74 (169)
106 TIGR02252 DREG-2 REG-2-like, H 66.8 14 0.00031 36.9 6.5 47 674-721 105-151 (203)
107 PF08282 Hydrolase_3: haloacid 66.6 8.7 0.00019 39.3 5.0 42 673-714 14-55 (254)
108 PRK10444 UMP phosphatase; Prov 66.4 5.4 0.00012 41.8 3.4 48 667-714 10-60 (248)
109 TIGR01457 HAD-SF-IIA-hyp2 HAD- 66.4 10 0.00022 39.7 5.5 55 667-721 10-67 (249)
110 PF00122 E1-E2_ATPase: E1-E2 A 65.9 1.1E+02 0.0023 31.2 13.0 61 224-284 4-76 (230)
111 PRK11590 hypothetical protein; 65.8 12 0.00027 37.9 5.9 41 674-714 95-136 (211)
112 TIGR02463 MPGP_rel mannosyl-3- 65.7 8 0.00017 39.4 4.5 38 677-714 19-56 (221)
113 PRK06698 bifunctional 5'-methy 65.0 20 0.00043 41.2 8.0 48 674-721 330-377 (459)
114 TIGR01668 YqeG_hyp_ppase HAD s 64.6 11 0.00024 36.9 5.1 41 674-714 43-84 (170)
115 PLN02575 haloacid dehalogenase 64.0 22 0.00048 39.7 7.7 49 674-722 216-264 (381)
116 COG1778 Low specificity phosph 63.4 8.8 0.00019 36.9 3.8 34 681-714 42-75 (170)
117 PHA02530 pseT polynucleotide k 62.8 8.8 0.00019 41.2 4.4 46 670-715 183-228 (300)
118 COG0474 MgtA Cation transport 62.1 1.3E+02 0.0029 37.8 15.0 91 188-283 80-181 (917)
119 PRK06769 hypothetical protein; 61.6 14 0.00031 36.2 5.2 28 674-701 28-55 (173)
120 PF13380 CoA_binding_2: CoA bi 61.2 11 0.00023 34.6 4.0 87 622-714 17-104 (116)
121 TIGR01685 MDP-1 magnesium-depe 60.3 15 0.00032 36.4 5.0 51 664-714 35-86 (174)
122 PLN02811 hydrolase 59.8 27 0.00058 35.6 7.1 34 672-705 76-109 (220)
123 TIGR01459 HAD-SF-IIA-hyp4 HAD- 58.8 15 0.00033 38.1 5.1 56 667-722 17-75 (242)
124 TIGR01549 HAD-SF-IA-v1 haloaci 57.7 25 0.00055 33.2 6.1 46 675-721 65-110 (154)
125 PLN02940 riboflavin kinase 57.6 20 0.00043 40.2 6.0 50 673-722 92-142 (382)
126 COG2179 Predicted hydrolase of 56.7 22 0.00048 34.6 5.3 80 621-714 51-133 (175)
127 TIGR01656 Histidinol-ppas hist 56.1 16 0.00034 34.8 4.3 41 674-714 27-82 (147)
128 PRK11587 putative phosphatase; 53.0 19 0.00041 36.7 4.6 41 674-714 83-123 (218)
129 PRK09484 3-deoxy-D-manno-octul 52.9 18 0.00038 36.0 4.2 34 681-714 55-88 (183)
130 TIGR01681 HAD-SF-IIIC HAD-supe 52.4 16 0.00035 33.9 3.7 39 674-712 29-68 (128)
131 TIGR01647 ATPase-IIIA_H plasma 51.9 5.2E+02 0.011 31.9 17.4 106 190-304 30-146 (755)
132 PLN02887 hydrolase family prot 50.0 18 0.00039 42.7 4.3 42 673-714 324-365 (580)
133 PRK12702 mannosyl-3-phosphogly 49.9 26 0.00056 37.6 5.0 42 673-714 17-58 (302)
134 PRK05446 imidazole glycerol-ph 47.9 47 0.001 36.7 6.9 42 673-714 29-85 (354)
135 PF12710 HAD: haloacid dehalog 47.3 9.1 0.0002 37.7 1.2 13 487-499 1-13 (192)
136 COG2179 Predicted hydrolase of 46.8 74 0.0016 31.1 7.1 67 625-714 20-86 (175)
137 TIGR01452 PGP_euk phosphoglyco 45.6 35 0.00076 36.3 5.4 56 667-722 11-69 (279)
138 cd02071 MM_CoA_mut_B12_BD meth 44.8 49 0.0011 30.4 5.6 82 626-714 21-104 (122)
139 TIGR01689 EcbF-BcbF capsule bi 44.6 20 0.00044 33.4 2.9 33 673-705 23-55 (126)
140 COG4359 Uncharacterized conser 41.0 1E+02 0.0022 30.7 7.1 38 674-711 73-110 (220)
141 cd04728 ThiG Thiazole synthase 41.0 2.3E+02 0.0049 29.7 10.0 90 621-710 22-143 (248)
142 PRK11507 ribosome-associated p 40.9 32 0.00068 28.5 3.1 25 258-282 38-62 (70)
143 TIGR01509 HAD-SF-IA-v3 haloaci 40.5 1.8E+02 0.0038 28.0 9.3 87 619-714 88-179 (183)
144 smart00577 CPDc catalytic doma 40.1 36 0.00079 32.4 4.1 88 671-770 42-131 (148)
145 TIGR02247 HAD-1A3-hyp Epoxide 39.6 32 0.0007 34.6 3.9 43 673-715 93-137 (211)
146 TIGR02254 YjjG/YfnB HAD superf 39.4 48 0.001 33.4 5.1 48 673-721 96-143 (224)
147 smart00775 LNS2 LNS2 domain. T 39.3 27 0.00059 33.7 3.1 34 672-705 25-58 (157)
148 PTZ00174 phosphomannomutase; P 39.2 42 0.00092 34.9 4.8 35 674-708 22-56 (247)
149 PTZ00445 p36-lilke protein; Pr 38.8 45 0.00097 34.0 4.5 29 674-702 75-103 (219)
150 cd02067 B12-binding B12 bindin 38.6 72 0.0016 28.9 5.7 82 626-714 21-104 (119)
151 TIGR01691 enolase-ppase 2,3-di 36.8 56 0.0012 33.6 5.1 41 671-711 92-132 (220)
152 PRK09449 dUMP phosphatase; Pro 36.8 50 0.0011 33.4 4.8 47 674-721 95-141 (224)
153 PRK09456 ?-D-glucose-1-phospha 36.6 2.5E+02 0.0054 27.8 9.7 89 617-714 85-180 (199)
154 COG0647 NagD Predicted sugar p 35.6 41 0.00089 35.7 3.9 45 667-711 17-61 (269)
155 TIGR02370 pyl_corrinoid methyl 33.8 54 0.0012 33.0 4.3 80 626-714 106-188 (197)
156 TIGR01485 SPP_plant-cyano sucr 33.5 67 0.0014 33.4 5.2 44 672-715 19-62 (249)
157 TIGR01664 DNA-3'-Pase DNA 3'-p 33.4 59 0.0013 31.7 4.4 39 676-714 44-94 (166)
158 TIGR01261 hisB_Nterm histidino 33.3 55 0.0012 31.8 4.2 41 674-714 29-84 (161)
159 PRK02261 methylaspartate mutas 33.2 1.3E+02 0.0028 28.4 6.5 81 626-713 25-113 (137)
160 TIGR02247 HAD-1A3-hyp Epoxide 33.0 3E+02 0.0065 27.4 9.8 89 619-714 97-191 (211)
161 KOG4383 Uncharacterized conser 32.2 22 0.00049 41.5 1.3 56 659-714 811-866 (1354)
162 PRK14502 bifunctional mannosyl 32.1 61 0.0013 38.9 4.9 40 675-714 434-473 (694)
163 TIGR01484 HAD-SF-IIB HAD-super 32.1 68 0.0015 32.0 4.8 39 674-712 17-55 (204)
164 TIGR01662 HAD-SF-IIIA HAD-supe 31.6 2.7E+02 0.0058 25.4 8.5 91 619-714 28-126 (132)
165 PRK00208 thiG thiazole synthas 31.4 4E+02 0.0087 27.9 10.1 90 621-710 23-143 (250)
166 PF03767 Acid_phosphat_B: HAD 31.2 36 0.00079 35.2 2.6 88 674-769 115-207 (229)
167 TIGR00213 GmhB_yaeD D,D-heptos 30.7 38 0.00083 33.2 2.6 27 674-700 26-52 (176)
168 PRK08942 D,D-heptose 1,7-bisph 30.7 70 0.0015 31.4 4.5 27 674-700 29-55 (181)
169 PRK10187 trehalose-6-phosphate 30.6 53 0.0011 34.8 3.8 40 674-713 36-76 (266)
170 cd05017 SIS_PGI_PMI_1 The memb 29.8 62 0.0013 29.4 3.7 36 676-713 56-91 (119)
171 PF14800 DUF4481: Domain of un 29.5 40 0.00088 35.8 2.6 66 4-72 47-118 (308)
172 cd04906 ACT_ThrD-I_1 First of 29.5 3.5E+02 0.0076 22.9 8.6 71 617-707 11-82 (85)
173 TIGR00676 fadh2 5,10-methylene 29.1 1.6E+02 0.0034 31.3 7.1 43 660-702 56-99 (272)
174 PRK11840 bifunctional sulfur c 28.9 4E+02 0.0086 29.1 10.0 90 621-710 96-217 (326)
175 TIGR01524 ATPase-IIIB_Mg magne 28.5 1.3E+03 0.027 29.0 16.8 37 261-305 150-186 (867)
176 PF13242 Hydrolase_like: HAD-h 28.1 64 0.0014 26.6 3.2 31 684-715 12-45 (75)
177 KOG3040 Predicted sugar phosph 28.1 1.1E+02 0.0024 31.0 5.2 51 664-714 13-66 (262)
178 TIGR01680 Veg_Stor_Prot vegeta 27.9 1.7E+02 0.0037 31.1 6.9 90 672-770 143-238 (275)
179 TIGR01522 ATPase-IIA2_Ca golgi 27.5 1.3E+03 0.029 28.9 16.8 92 205-305 70-172 (884)
180 TIGR00213 GmhB_yaeD D,D-heptos 27.3 3.4E+02 0.0074 26.3 8.8 38 675-714 105-145 (176)
181 TIGR01422 phosphonatase phosph 26.9 3.2E+02 0.0069 28.2 8.9 89 619-714 102-196 (253)
182 TIGR01501 MthylAspMutase methy 26.9 1.9E+02 0.0042 27.2 6.4 80 627-713 24-111 (134)
183 TIGR01454 AHBA_synth_RP 3-amin 26.7 4.3E+02 0.0092 26.2 9.6 89 618-714 77-170 (205)
184 TIGR02329 propionate_PrpR prop 26.7 4.3E+02 0.0094 31.0 10.7 80 621-714 86-165 (526)
185 TIGR01668 YqeG_hyp_ppase HAD s 25.7 1.5E+02 0.0032 28.9 5.8 85 617-714 44-131 (170)
186 PF02219 MTHFR: Methylenetetra 25.0 1.6E+02 0.0034 31.5 6.3 44 660-703 68-112 (287)
187 PF13275 S4_2: S4 domain; PDB: 24.7 41 0.0009 27.4 1.3 25 258-282 34-58 (65)
188 cd01137 PsaA Metal binding pro 24.4 2.7E+02 0.0059 29.7 7.9 54 661-714 194-251 (287)
189 smart00306 HintN Hint (Hedgeho 23.8 88 0.0019 26.9 3.4 29 254-282 71-99 (100)
190 cd02070 corrinoid_protein_B12- 23.7 1E+02 0.0022 31.1 4.2 80 626-714 104-186 (201)
191 PLN02779 haloacid dehalogenase 23.4 95 0.0021 33.2 4.2 39 674-712 144-182 (286)
192 PRK09456 ?-D-glucose-1-phospha 23.2 96 0.0021 30.9 4.0 33 674-706 84-116 (199)
193 cd00738 HGTP_anticodon HGTP an 23.1 2.5E+02 0.0055 23.6 6.2 40 674-713 15-55 (94)
194 PF06783 UPF0239: Uncharacteri 22.8 1E+02 0.0022 26.5 3.3 30 184-213 11-40 (85)
195 PF12689 Acid_PPase: Acid Phos 22.8 1.3E+02 0.0027 29.7 4.5 41 674-714 45-86 (169)
196 TIGR02253 CTE7 HAD superfamily 22.4 5.4E+02 0.012 25.6 9.5 91 618-714 96-190 (221)
197 TIGR00640 acid_CoA_mut_C methy 22.3 1.9E+02 0.0041 27.1 5.5 82 626-714 24-107 (132)
198 TIGR02250 FCP1_euk FCP1-like p 22.3 1.2E+02 0.0026 29.2 4.3 44 671-715 55-98 (156)
199 cd00860 ThrRS_anticodon ThrRS 22.2 1.6E+02 0.0035 24.7 4.8 46 669-714 7-53 (91)
200 COG0637 Predicted phosphatase/ 22.2 1.3E+02 0.0028 30.7 4.8 50 672-721 84-133 (221)
201 PRK14715 DNA polymerase II lar 21.9 59 0.0013 41.4 2.4 30 255-284 988-1017(1627)
202 TIGR03351 PhnX-like phosphonat 21.7 4.5E+02 0.0098 26.2 8.7 91 618-714 89-185 (220)
203 TIGR02251 HIF-SF_euk Dullard-l 21.6 1.3E+02 0.0029 29.1 4.5 44 670-714 38-81 (162)
204 KOG4383 Uncharacterized conser 21.4 64 0.0014 38.0 2.4 40 258-304 159-198 (1354)
205 PRK01045 ispH 4-hydroxy-3-meth 21.4 1E+03 0.023 25.6 11.7 151 536-714 34-214 (298)
206 PF12017 Tnp_P_element: Transp 21.3 1.2E+02 0.0025 31.6 4.1 36 680-715 199-234 (236)
207 COG1011 Predicted hydrolase (H 21.1 2.6E+02 0.0055 28.1 6.8 49 672-721 97-145 (229)
208 TIGR02009 PGMB-YQAB-SF beta-ph 21.0 3.7E+02 0.0081 25.8 7.7 38 675-714 141-181 (185)
209 TIGR00677 fadh2_euk methylenet 20.9 2.7E+02 0.0059 29.7 7.0 42 661-702 58-100 (281)
210 cd01019 ZnuA Zinc binding prot 20.6 2.1E+02 0.0045 30.6 6.1 53 661-713 196-252 (286)
211 TIGR01428 HAD_type_II 2-haloal 20.4 1.5E+02 0.0032 29.4 4.6 88 619-714 95-187 (198)
212 cd02072 Glm_B12_BD B12 binding 20.4 2.6E+02 0.0056 26.2 5.8 81 627-714 22-110 (128)
213 PF09926 DUF2158: Uncharacteri 20.3 82 0.0018 24.6 2.1 12 274-285 2-13 (53)
214 PRK11479 hypothetical protein; 20.0 28 0.0006 36.9 -0.7 19 266-284 58-76 (274)
No 1
>KOG0209 consensus P-type ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.2e-183 Score=1501.66 Aligned_cols=771 Identities=56% Similarity=0.925 Sum_probs=732.9
Q ss_pred ccccCCcceeeEEeecccccccccccchhhhHHHHHHHHhhccCCC-cch----hhhHHHHHHHHHHHHhhcccccccce
Q 003952 3 SFHVGGKVVDRVDLLRKKHWVWRLDVWPFAILYSGWLIAIVPSIDF-GDA----AIVLGGLVAFHILVWLFTAWSVDFKC 77 (784)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~-~~~----~~~~~~~~~~~~l~~l~~~w~~~~~~ 77 (784)
...|+ |.|+.+.||++||+.+|+|||||+++|+.|++.|+.++++ ++| +++++++.++|+|++|+++||++++|
T Consensus 3 ~~~v~-~~v~~~~l~~~~~l~~~lyV~Pf~~l~a~~~~~~~~~~~~~~~~~~~t~i~~g~l~~~hilvlL~~~Wsv~v~~ 81 (1160)
T KOG0209|consen 3 KFRVD-PLVEMVILYVKRPLHKRLYVWPFAILYAMWLTLWYPQADFYEEFRELTFIALGALSAIHILVLLFTFWSVKVRC 81 (1160)
T ss_pred ccccc-chhhhheeeeeccccccccccchHHHHHHHHHHhhhccccceeeeeeeEEEecHHHHHHHHHHHHHhhchheeE
Confidence 34555 9999999999999999999999999999999999999884 444 67789999999999999999999999
Q ss_pred eEEeccCCCcCCCcEEEEEeCCCCCceeeEEeeeeccccccCCCCCCceEEEEEeeEEEEEECCCCceeecCCCCchhhh
Q 003952 78 FAHYSKINDIHLADACKITPVKFCGSKEVVPLQFWKQSAVSSTPVDEDEICFDFRKQHFIYSREKGTFCKLPYPTKETFG 157 (784)
Q Consensus 78 ~~~~~~~~~~~~a~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~y~~~~~~~~f~~~~~~~~~~~~ 157 (784)
+++|++.+++++|+|++|+|++++|++++|||++... +++..++||+|||.||+|+++++.|.++.+|.++++.
T Consensus 82 ~~~~~~~~~v~~at~i~v~pt~nnGs~~lv~l~~~~~------~~~~~q~~F~Fqk~ry~~~~e~~~F~~~~fp~~~~~g 155 (1160)
T KOG0209|consen 82 FFTCSKTKDVSKATHILVTPTPNNGSSELVPLHRGVL------EDGMEQYFFEFQKKRYLYDEEKGKFSRLTFPTDEPFG 155 (1160)
T ss_pred EEeeccccCcccccEEEEEccCCCCCcceeEeeeccc------CCCceEEEEEEEEeeEEEcccccceeccccCcCCcch
Confidence 9999999999999999999999999999999997643 4667889999999999999999999999999999999
Q ss_pred hhhhcCCCCCHHHHHHHHhcCCCCccCCCCccHHHHHHHHhhhhHHHHHHHhhhhcccchhhhhHHHHHHHHHHHHHHHH
Q 003952 158 YYLKCTGHSTEAKIAVATEKWGRNVFEYPQPTFQKLMKENCMEPFFVFQVFCVGLWCLDEYWYYSLFTLFMLFMFESTMA 237 (784)
Q Consensus 158 ~~~~~~g~l~~~~v~~~~~~yG~N~~~~~~~s~~~ll~~~~~~pf~vfqi~~~~lw~l~~y~~~~~~~l~~l~~~~~~~~ 237 (784)
.|++++|...++++...+++||+|.+++|+|+|.++|+|++.+|||+||+||++|||+|+|||||+|+++|++.+|++.+
T Consensus 156 ~~~k~~G~~~~~~i~~a~~~~G~N~fdi~vPtF~eLFkE~A~aPfFVFQVFcvgLWCLDeyWYySlFtLfMli~fE~tlV 235 (1160)
T KOG0209|consen 156 YFQKSTGHEEESEIKLAKHKYGKNKFDIVVPTFSELFKEHAVAPFFVFQVFCVGLWCLDEYWYYSLFTLFMLIAFEATLV 235 (1160)
T ss_pred hhhhccCcchHHHHHHHHHHhcCCccccCCccHHHHHHHhccCceeeHhHHhHHHHHhHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999998888899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhhhCCceEEEEEcCeEEEeecCCCCCCcEEEEcCCCCCCCCCCeecceeeEeeCeeEeeccCCCCCCc
Q 003952 238 KSRLKTLTEIRRVRVDNQTIMVHRCGKWVKLAGTDLVPGDVVSIGRSSGQTGEDKSVPADMLILGGSAIVNEAILTGEST 317 (784)
Q Consensus 238 ~~~~~~~~~l~~~~~~~~~v~V~R~g~~~~I~s~~LvpGDiV~i~~ge~d~~~~~~vPaD~ill~G~~~VdES~LTGES~ 317 (784)
+||.+++.++|+|..+|+.+.|+|+++|+.+.++||+|||+|+|.+|. |+..||||.+||+|+|+||||||||||+
T Consensus 236 ~Qrm~~lse~R~Mg~kpy~I~v~R~kKW~~l~seeLlPgDvVSI~r~~----ed~~vPCDllLL~GsciVnEaMLtGESv 311 (1160)
T KOG0209|consen 236 KQRMRTLSEFRTMGNKPYTINVYRNKKWVKLMSEELLPGDVVSIGRGA----EDSHVPCDLLLLRGSCIVNEAMLTGESV 311 (1160)
T ss_pred HHHHHHHHHHHhcCCCceEEEEEecCcceeccccccCCCceEEeccCc----ccCcCCceEEEEecceeechhhhcCCCc
Confidence 999999999999999999999999999999999999999999999998 6679999999999999999999999999
Q ss_pred ceeeccccCCCCccccccccC-CCeeEEeeeeEeecCCCCCcCCCCCCCceEEEEEeeccccchhHHHHHhccccccccc
Q 003952 318 PQWKVSIMGRETGEKLSARRD-KSHVLFGGTKILQHTPDKTFPLKTPDGGCLAVVLRTGFETSQGKLMRTILFSTERVTA 396 (784)
Q Consensus 318 Pv~K~~~~~~~~~~~~~~~~~-~~~~lf~GT~v~~~~~~~~~~~~~~~g~~~~~V~~TG~~T~~gkl~~~i~~~~~~~~~ 396 (784)
|++|++++..+.++.++.+++ |.|++|+||+++|++++....+++|||+|+|+|+||||||+||+++|+|+++.+|.+.
T Consensus 312 Pl~KE~Ie~~~~d~~ld~~~d~k~hVlfGGTkivQht~p~~~slk~pDggc~a~VlrTGFeTSQGkLvRtilf~aervTa 391 (1160)
T KOG0209|consen 312 PLMKESIELRDSDDILDIDRDDKLHVLFGGTKIVQHTPPKKASLKTPDGGCVAYVLRTGFETSQGKLVRTILFSAERVTA 391 (1160)
T ss_pred cccccccccCChhhhcccccccceEEEEcCceEEEecCCccccccCCCCCeEEEEEeccccccCCceeeeEEecceeeee
Confidence 999999999999999999886 9999999999999999999999999999999999999999999999999999999999
Q ss_pred chhHHHHHHHHHHHHHHHHhhheeecCcCCccchhHHHHHHHHhhhhcccCCcchHHHHHHHHHHHHHHHhcCceecCCC
Q 003952 397 NSWESGLFILFLVVFAVIAAGYVLKKGMEDPTRSKYKLFLSCSLIITSVIPPELPMELSIAVNTSLIALARRGIFCTEPF 476 (784)
Q Consensus 397 ~~~~~~~fi~~ll~~aii~~~~~~~~~~~~~~~~~~~~~l~~i~ii~~~vP~~Lp~~lslav~~s~~~l~k~~I~~~~~~ 476 (784)
+|++++.||+||++||+++++|+|..|..+++|+.+++++.|++|+|++|||+|||++++|+|.|+.+|+|.+|||++|+
T Consensus 392 Nn~Etf~FILFLlVFAiaAa~Yvwv~Gskd~~RsrYKL~LeC~LIlTSVvPpELPmELSmAVNsSL~ALak~~vyCTEPF 471 (1160)
T KOG0209|consen 392 NNRETFIFILFLLVFAIAAAGYVWVEGSKDPTRSRYKLFLECTLILTSVVPPELPMELSMAVNSSLIALAKLGVYCTEPF 471 (1160)
T ss_pred ccHHHHHHHHHHHHHHHHhhheEEEecccCcchhhhheeeeeeEEEeccCCCCCchhhhHHHHHHHHHHHHhceeecCcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcCcCCceeEEEecccCcccCCceEEEEEEecCCC-ccccCCCCCcHHHHHHHHhccceEeeCCcccCCHHHHHHHhccC
Q 003952 477 RIPFAGKVDMCCFDKTGTLTSDDMEFRGVVGLSNA-ELEDDMTKVPVRTQEILASCHALVFVDNKLVGDPLEKAALKGID 555 (784)
Q Consensus 477 ~ie~lG~vd~icfDKTGTLT~~~m~v~~i~~~~~~-~~~~~~~~~~~~~~~~la~chsl~~~~~~~~gdple~All~~~~ 555 (784)
|||++|+||+||||||||||++.|.|+|+.+.+.+ ....+.++.|.++.+++|+||++...+++++|||+|+|++++.+
T Consensus 472 RIPfAGkvdvCCFDKTGTLT~d~lvv~Gvag~~~~~~~~~~~s~~p~~t~~vlAscHsLv~le~~lVGDPlEKA~l~~v~ 551 (1160)
T KOG0209|consen 472 RIPFAGKVDVCCFDKTGTLTEDDLVVEGVAGLSADEGALTPASKAPNETVLVLASCHSLVLLEDKLVGDPLEKATLEAVG 551 (1160)
T ss_pred ccccCCceeEEEecCCCccccccEEEEecccccCCcccccchhhCCchHHHHHHHHHHHHHhcCcccCChHHHHHHHhcC
Confidence 99999999999999999999999999999986543 22334667788899999999999999888999999999999999
Q ss_pred ccccCCCccccCCCCCcceeEEEEEccCCCCCeeEEEEEECC-----EEEEEEeCchHHHHHhhccCchhHHHHHHHHhh
Q 003952 556 WSYKSDEKAMPKRGGGNAVQIVQRHHFASHLKRMSVVVRVQE-----EFFAFVKGAPETIQDRLTDLPSSYIETYKKYTH 630 (784)
Q Consensus 556 ~~~~~~~~~~~~~~~~~~~~il~~~~Fss~~krmsviv~~~~-----~~~~~~KGapE~I~~~~~~~p~~~~~~~~~~~~ 630 (784)
|+++.++...+.++....++|.+||+|+|++|||||+++.++ ++++.+|||||+|++++.++|.+|++.|++|++
T Consensus 552 W~~~k~~~v~p~~~~~~~lkI~~ryhFsSaLKRmsvva~~~~~g~s~k~~~aVKGAPEvi~~ml~dvP~dY~~iYk~ytR 631 (1160)
T KOG0209|consen 552 WNLEKKNSVCPREGNGKKLKIIQRYHFSSALKRMSVVASHQGPGSSEKYFVAVKGAPEVIQEMLRDVPKDYDEIYKRYTR 631 (1160)
T ss_pred cccccCcccCCCcCCCcccchhhhhhHHHHHHHHHhhhhcccCCCceEEEEEecCCHHHHHHHHHhCchhHHHHHHHHhh
Confidence 999999988888887788999999999999999999999875 799999999999999999999999999999999
Q ss_pred ccCeEEEEEEEeCCCCChhhHhhhhhhhccCCcEEEEEEeecCCCCcchHHHHHHHhhCCCcEEEEcCCCHHHHHHHHHH
Q 003952 631 QGSRVLALAFKSLPDMTVSDARSLHRDEVENGLTFAGFAVFNCPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQ 710 (784)
Q Consensus 631 ~G~Rvlala~k~l~~~~~~~~~~~~r~~~E~~l~flG~l~~~d~lr~da~~~I~~L~~agi~v~MITGDn~~TA~~VA~~ 710 (784)
+|+||||+|||.++....++.++++|+++|+||+|+||++|.||+|+|++++|++|++++|+|+||||||++||+|||++
T Consensus 632 ~GsRVLALg~K~l~~~~~~q~rd~~Re~vEsdLtFaGFlif~CPlK~Ds~~~I~el~~SSH~vvMITGDnpLTAchVak~ 711 (1160)
T KOG0209|consen 632 QGSRVLALGYKPLGDMMVSQVRDLKREDVESDLTFAGFLIFSCPLKPDSKKTIKELNNSSHRVVMITGDNPLTACHVAKE 711 (1160)
T ss_pred ccceEEEEecccccccchhhhhhhhhhhhhhcceeeeeEEEeCCCCccHHHHHHHHhccCceEEEEeCCCccchheehhe
Confidence 99999999999999888889999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccCCcEEEec--CCCCCeeEEeCCCcccccccchhhhhc-cCCCeeEEEechhHHHHhcCchHhhhccccEEeC
Q 003952 711 VHIVTKPVLILCP--VKNGKVYEWVSPDETEKIQYSEKEVEG-LTDAHDLCIGGDCFEMLQQTSAVLRVIPYVKVLK 784 (784)
Q Consensus 711 ~gI~~~~~~il~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~-l~~~~~l~~tGd~l~~l~~~~~~~~~~~~~~VfA 784 (784)
+||+.+...+++. ..++..++|+++|++..+|+++...+. +...|++|+||++|+++.+++.+.++++|+||||
T Consensus 712 v~iv~k~~~vl~~~~~~~~~~~~w~s~d~t~~lp~~p~~~~~~l~~~~dlcitG~~l~~l~~~~~l~~l~~hv~VfA 788 (1160)
T KOG0209|consen 712 VGIVEKPTLVLDLPEEGDGNQLEWVSVDGTIVLPLKPGKKKTLLAETHDLCITGSALDHLQATDQLRRLIPHVWVFA 788 (1160)
T ss_pred eeeeccCceeeccCccCCCceeeEecCCCceeecCCCCccchhhhhhhhhhcchhHHHHHhhhHHHHHhhhheeEEE
Confidence 9999887777754 345678999999999999998876554 8889999999999999999999999999999998
No 2
>TIGR01657 P-ATPase-V P-type ATPase of unknown pump specificity (type V). These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in.
Probab=100.00 E-value=2.2e-119 Score=1108.66 Aligned_cols=719 Identities=42% Similarity=0.676 Sum_probs=605.1
Q ss_pred hhhHHHHHHHHHHHHhhcccccccceeEEeccCCCcCCCcEEEEEeCCCCCceeeEEeeeeccccc----cCCCCCCceE
Q 003952 52 AIVLGGLVAFHILVWLFTAWSVDFKCFAHYSKINDIHLADACKITPVKFCGSKEVVPLQFWKQSAV----SSTPVDEDEI 127 (784)
Q Consensus 52 ~~~~~~~~~~~~l~~l~~~w~~~~~~~~~~~~~~~~~~a~~~~v~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~ 127 (784)
+++++..++.|++++|+++|+++||++++|++|+..+.|+|+++.|.++.|+.+++++++...... .........+
T Consensus 17 ~~~~~~~~~~~g~~~l~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 96 (1054)
T TIGR01657 17 IIYLVTLILTFGLVLLLLTWLPEWKVKLRYVPVSNEDAETVVIVDPTPNSGSDYIVELSNKSLSNDLQTENAVEGGEEPI 96 (1054)
T ss_pred HHHHHHHHHHHHHHHHHHHhHHHHhhhEEEeeCCcccCcEEEEEECCcccCCceEEeecccccccccccccccCCCCceE
Confidence 344556778999999999999999999999999999999999999988999999999875322110 0112334678
Q ss_pred EEEEeeEEEEEECCCCc-eeecCCCCchh-hhhhhhc---CCCCCHHHHHHHHhcCCCCccCCCCccHHHHHHHHhhhhH
Q 003952 128 CFDFRKQHFIYSREKGT-FCKLPYPTKET-FGYYLKC---TGHSTEAKIAVATEKWGRNVFEYPQPTFQKLMKENCMEPF 202 (784)
Q Consensus 128 ~f~~~~~~y~~~~~~~~-f~~~~~~~~~~-~~~~~~~---~g~l~~~~v~~~~~~yG~N~~~~~~~s~~~ll~~~~~~pf 202 (784)
||+||+.||+|+++++. |.+++++.+.. +..+.+. ..||+++|+++|+++||+|++++|.|+|+++|++++++||
T Consensus 97 ~f~~~~~~y~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~GLs~~e~~~r~~~yG~N~i~~~~~s~~~ll~~~~~~p~ 176 (1054)
T TIGR01657 97 YFDFRKQRFSYHEKELKIFSPLPYLFKEKSFGVYSTCAGHSNGLTTGDIAQRKAKYGKNEIEIPVPSFLELLKEEVLHPF 176 (1054)
T ss_pred EEEEEEEEEEEECCCCceEEecccccccccchhhhhhhhhccCCCHHHHHHHHHhcCCCeeecCCCCHHHHHHHHHhchH
Confidence 99999999999999995 99999987654 4444332 3567999999999999999999999999999999999999
Q ss_pred HHHHHHhhhhcccchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhCCceEEEEEcCeEEEeecCCCCCCcEEEEc
Q 003952 203 FVFQVFCVGLWCLDEYWYYSLFTLFMLFMFESTMAKSRLKTLTEIRRVRVDNQTIMVHRCGKWVKLAGTDLVPGDVVSIG 282 (784)
Q Consensus 203 ~vfqi~~~~lw~l~~y~~~~~~~l~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~v~V~R~g~~~~I~s~~LvpGDiV~i~ 282 (784)
++||++|+++|++++||+|++++++++++.+....++++|+.++|++|...+..++|+|||+|++|+++||||||+|.|+
T Consensus 177 ~i~~i~~~~l~~~~~~~~~~~~i~~i~~~~~~~~~~~~~k~~~~L~~~~~~~~~v~V~Rdg~~~~I~s~eLvpGDiv~l~ 256 (1054)
T TIGR01657 177 YVFQVFSVILWLLDEYYYYSLCIVFMSSTSISLSVYQIRKQMQRLRDMVHKPQSVIVIRNGKWVTIASDELVPGDIVSIP 256 (1054)
T ss_pred HHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCeeEEEEECCEEEEEEcccCCCCCEEEEe
Confidence 99999999999999999999999999999999999999999999999987788999999999999999999999999999
Q ss_pred --CCCCCCCCCCeecceeeEeeCeeEeeccCCCCCCcceeeccccCC-CC-ccccccccCCCeeEEeeeeEeecCCCCCc
Q 003952 283 --RSSGQTGEDKSVPADMLILGGSAIVNEAILTGESTPQWKVSIMGR-ET-GEKLSARRDKSHVLFGGTKILQHTPDKTF 358 (784)
Q Consensus 283 --~ge~d~~~~~~vPaD~ill~G~~~VdES~LTGES~Pv~K~~~~~~-~~-~~~~~~~~~~~~~lf~GT~v~~~~~~~~~ 358 (784)
+|+ .|||||+|++|+|.||||+|||||.|+.|.+++.. .+ ++......+++|++|+||.|+|++++..
T Consensus 257 ~~~g~-------~iPaD~~ll~g~~~VdES~LTGES~Pv~K~~~~~~~~~~~~~~~~~~~~~~~lf~GT~v~~~~~~~g- 328 (1054)
T TIGR01657 257 RPEEK-------TMPCDSVLLSGSCIVNESMLTGESVPVLKFPIPDNGDDDEDLFLYETSKKHVLFGGTKILQIRPYPG- 328 (1054)
T ss_pred cCCCC-------EecceEEEEeCcEEEecccccCCccceecccCCccccccccccccccccceEEEcCCEEEEEecCCC-
Confidence 666 99999999999999999999999999999987541 11 1222334578999999999998654311
Q ss_pred CCCCCCCceEEEEEeeccccchhHHHHHhcccccccccchhHHHHHHHHHHHHHHHHhhheeecCcCCccchhHHHHHHH
Q 003952 359 PLKTPDGGCLAVVLRTGFETSQGKLMRTILFSTERVTANSWESGLFILFLVVFAVIAAGYVLKKGMEDPTRSKYKLFLSC 438 (784)
Q Consensus 359 ~~~~~~g~~~~~V~~TG~~T~~gkl~~~i~~~~~~~~~~~~~~~~fi~~ll~~aii~~~~~~~~~~~~~~~~~~~~~l~~ 438 (784)
+|.+.|+|++||++|.+|++++++.+++++.+++++++..|+.+++++|++++++++..++.. +.++...++.|
T Consensus 329 -----~g~~~~vV~~TG~~T~~G~i~~~i~~~~~~~~~~~~~~~~~~~~l~~~a~i~~i~~~~~~~~~-~~~~~~~~l~~ 402 (1054)
T TIGR01657 329 -----DTGCLAIVVRTGFSTSKGQLVRSILYPKPRVFKFYKDSFKFILFLAVLALIGFIYTIIELIKD-GRPLGKIILRS 402 (1054)
T ss_pred -----CCcEEEEEEeCCccccchHHHHHhhCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CCcHHHHHHHH
Confidence 478999999999999999999999999888899999999999999999888877766554332 45678899999
Q ss_pred HhhhhcccCCcchHHHHHHHHHHHHHHHhcCceecCCCCcCcCCceeEEEecccCcccCCceEEEEEEecCCCcc-----
Q 003952 439 SLIITSVIPPELPMELSIAVNTSLIALARRGIFCTEPFRIPFAGKVDMCCFDKTGTLTSDDMEFRGVVGLSNAEL----- 513 (784)
Q Consensus 439 i~ii~~~vP~~Lp~~lslav~~s~~~l~k~~I~~~~~~~ie~lG~vd~icfDKTGTLT~~~m~v~~i~~~~~~~~----- 513 (784)
+.+++++|||+||++++++++.|+.||+|++|+|++|.++|.+|++|+||||||||||+|+|+|.+++..+....
T Consensus 403 l~iiv~~vP~~LP~~~ti~l~~~~~rL~k~~il~~~~~~ie~lG~v~vicfDKTGTLTen~m~v~~v~~~~~~~~~~~~~ 482 (1054)
T TIGR01657 403 LDIITIVVPPALPAELSIGINNSLARLKKKGIFCTSPFRINFAGKIDVCCFDKTGTLTEDGLDLRGVQGLSGNQEFLKIV 482 (1054)
T ss_pred HHHHHhhcCchHHHHHHHHHHHHHHHHHHCCEEEcCcccceecceeeEEEEcCCCCCccCCeeEEeEecccCcccccccc
Confidence 999999999999999999999999999999999999999999999999999999999999999999987543211
Q ss_pred ccCCCCCcHHHHHHHHhccceEeeCCcccCCHHHHHHHhccCccccCC-CccccCC--------CCCcceeEEEEEccCC
Q 003952 514 EDDMTKVPVRTQEILASCHALVFVDNKLVGDPLEKAALKGIDWSYKSD-EKAMPKR--------GGGNAVQIVQRHHFAS 584 (784)
Q Consensus 514 ~~~~~~~~~~~~~~la~chsl~~~~~~~~gdple~All~~~~~~~~~~-~~~~~~~--------~~~~~~~il~~~~Fss 584 (784)
.......+.....++++||++...+|+++|||+|.|++++++|.+..+ ....+.. .....++++++|||+|
T Consensus 483 ~~~~~~~~~~~~~~~a~C~~~~~~~~~~~Gdp~E~al~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~il~~~pF~S 562 (1054)
T TIGR01657 483 TEDSSLKPSITHKALATCHSLTKLEGKLVGDPLDKKMFEATGWTLEEDDESAEPTSILAVVRTDDPPQELSIIRRFQFSS 562 (1054)
T ss_pred ccccccCchHHHHHHHhCCeeEEECCEEecCHHHHHHHHhCCCEEECCCCcccccccccceeccCCCceEEEEEEEeecC
Confidence 000112334567789999999988889999999999999999987652 2111110 1125689999999999
Q ss_pred CCCeeEEEEEECC--EEEEEEeCchHHHHHhhc--cCchhHHHHHHHHhhccCeEEEEEEEeCCCCChhhHhhhhhhhcc
Q 003952 585 HLKRMSVVVRVQE--EFFAFVKGAPETIQDRLT--DLPSSYIETYKKYTHQGSRVLALAFKSLPDMTVSDARSLHRDEVE 660 (784)
Q Consensus 585 ~~krmsviv~~~~--~~~~~~KGapE~I~~~~~--~~p~~~~~~~~~~~~~G~Rvlala~k~l~~~~~~~~~~~~r~~~E 660 (784)
++|||||+++..+ ++++++|||||.|+++|. ++|+++++.+++|+++|+||||+|||++++.+.++..+.+|+++|
T Consensus 563 ~~krMsvvv~~~~~~~~~~~~KGApE~Il~~c~~~~~p~~~~~~~~~~a~~G~RVLalA~k~l~~~~~~~~~~~~r~~~E 642 (1054)
T TIGR01657 563 ALQRMSVIVSTNDERSPDAFVKGAPETIQSLCSPETVPSDYQEVLKSYTREGYRVLALAYKELPKLTLQKAQDLSRDAVE 642 (1054)
T ss_pred CCCEEEEEEEEcCCCeEEEEEECCHHHHHHHcCCcCCChhHHHHHHHHHhcCCEEEEEEEeecCccchhhhhhccHHHHh
Confidence 9999999999753 578999999999999997 789999999999999999999999999986555556677899999
Q ss_pred CCcEEEEEEeecCCCCcchHHHHHHHhhCCCcEEEEcCCCHHHHHHHHHHcccccCC-cEEEec-----CCCCCeeEEeC
Q 003952 661 NGLTFAGFAVFNCPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKP-VLILCP-----VKNGKVYEWVS 734 (784)
Q Consensus 661 ~~l~flG~l~~~d~lr~da~~~I~~L~~agi~v~MITGDn~~TA~~VA~~~gI~~~~-~~il~~-----~~~~~~~~~~~ 734 (784)
+||+|+|+++|+||+|||++++|++||++||+++||||||++||.+||++|||++.. ..++.+ .++...+.|..
T Consensus 643 ~~L~flGli~~~d~lr~~~~~~I~~l~~agi~v~miTGD~~~TA~~iA~~~gii~~~~~vi~~~~~~~~~~~~~~~~~~~ 722 (1054)
T TIGR01657 643 SNLTFLGFIVFENPLKPDTKEVIKELKRASIRTVMITGDNPLTAVHVARECGIVNPSNTLILAEAEPPESGKPNQIKFEV 722 (1054)
T ss_pred cCceEEEEEEEecCCCccHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCCCceEEEeecccccCCCCceEEEEe
Confidence 999999999999999999999999999999999999999999999999999999654 444432 12345688988
Q ss_pred CCccc------ccccchh---hhhccCCCeeEEEechhHHHHhcC--chHhhhccccEEeC
Q 003952 735 PDETE------KIQYSEK---EVEGLTDAHDLCIGGDCFEMLQQT--SAVLRVIPYVKVLK 784 (784)
Q Consensus 735 ~~~~~------~~~~~~~---~~~~l~~~~~l~~tGd~l~~l~~~--~~~~~~~~~~~VfA 784 (784)
.++.. ..+.+.. ......+++++||||+.|+++.+. .++.+++.+++|||
T Consensus 723 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~itG~~l~~l~~~~~~~l~~~~~~~~VfA 783 (1054)
T TIGR01657 723 IDSIPFASTQVEIPYPLGQDSVEDLLASRYHLAMSGKAFAVLQAHSPELLLRLLSHTTVFA 783 (1054)
T ss_pred cCccccccccccccCcccccchhhhcccceEEEEEcHHHHHHHHhhHHHHHHHHhcCeEEE
Confidence 87632 1111110 112234567899999999998765 57889999999998
No 3
>KOG0208 consensus Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=6.6e-121 Score=1026.78 Aligned_cols=714 Identities=29% Similarity=0.460 Sum_probs=596.0
Q ss_pred hhHHHHHHHHHHHHhhcccccccceeEEeccCCCcCCCcEEEEEeCCCCCceeeEEeeeeccccc-c----CCCCCCceE
Q 003952 53 IVLGGLVAFHILVWLFTAWSVDFKCFAHYSKINDIHLADACKITPVKFCGSKEVVPLQFWKQSAV-S----STPVDEDEI 127 (784)
Q Consensus 53 ~~~~~~~~~~~l~~l~~~w~~~~~~~~~~~~~~~~~~a~~~~v~~~~~~~~~~~~~~~~~~~~~~-~----~~~~~~~~~ 127 (784)
++.+..++..|+++|+++|.++|+.++.+.+| ++++|++|.|... +|..++.++.+....+. + ...+....+
T Consensus 41 ~y~v~~vLTlG~~~Li~rWlP~~~vk~~~~Pc-sl~~ae~V~Ie~~--~g~~~~~~v~~~~~~~~~~~~~~~~~~~~~~r 117 (1140)
T KOG0208|consen 41 FYNVLCVLTLGLFHLIFRWLPKWKVKLRGSPC-SLADAEWVVIEDQ--NGTSEIVDVLAQSSEEPLSTSRYSQEGVGRVR 117 (1140)
T ss_pred hhHHHHHHHhhHHHHHHhhcchheEEEEeccc-CcccccEEEEEcC--CCcEEehhhhhhhccCCccccchhhcccchhh
Confidence 34444566789999999999999999999988 6899999999864 78899988875443211 1 112344568
Q ss_pred EEEEeeEEEEEECC-CCceeecCCCCc-----hhhhhhhhcCCCCCHHHHHHHHhcCCCCccCCCCccHHHHHHHHhhhh
Q 003952 128 CFDFRKQHFIYSRE-KGTFCKLPYPTK-----ETFGYYLKCTGHSTEAKIAVATEKWGRNVFEYPQPTFQKLMKENCMEP 201 (784)
Q Consensus 128 ~f~~~~~~y~~~~~-~~~f~~~~~~~~-----~~~~~~~~~~g~l~~~~v~~~~~~yG~N~~~~~~~s~~~ll~~~~~~p 201 (784)
+|.|++.+|.|.++ +..|.+ .++.+ ...+.......|++.+++..|+..||+|.+..+.++.++++.+|.++|
T Consensus 118 ~~~~kkl~~~~~~~~~~~w~~-~~~~~~~~~~~~~~~~~~~~~gL~~~~~~~r~~iyG~N~i~l~ik~i~~iLv~EvL~P 196 (1140)
T KOG0208|consen 118 DFAYKKLEYDPVSELRFIWPP-FQKAEFRDDPRWYSTESYVSNGLERQEIIDRRIIYGRNVISLPIKSISQILVKEVLNP 196 (1140)
T ss_pred hhhhhcceeccccccceeecc-ccchhhccchhhhccceeccCCccHHHHHhHHhhcCCceeeeecccHHHHHHHhccch
Confidence 99999999999886 444444 11111 112222333467788999999999999999999999999999999999
Q ss_pred HHHHHHHhhhhcccchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhCCceEEEEEcCeEEEeecCCCCCCcEEEE
Q 003952 202 FFVFQVFCVGLWCLDEYWYYSLFTLFMLFMFESTMAKSRLKTLTEIRRVRVDNQTIMVHRCGKWVKLAGTDLVPGDVVSI 281 (784)
Q Consensus 202 f~vfqi~~~~lw~l~~y~~~~~~~l~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~v~V~R~g~~~~I~s~~LvpGDiV~i 281 (784)
||+||+||+++|..|+|+||+.+++++.+......+++.++...++|+|...+..|+|+|+|.|++|+|+|||||||+.+
T Consensus 197 fYlFQ~fSv~lW~~d~Y~~YA~cI~iisv~Si~~sv~e~r~qs~rlr~mv~~~~~V~V~R~g~~~ti~S~eLVPGDil~i 276 (1140)
T KOG0208|consen 197 FYLFQAFSVALWLADSYYYYAFCIVIISVYSIVLSVYETRKQSIRLRSMVKFTCPVTVIRDGFWETVDSSELVPGDILYI 276 (1140)
T ss_pred HHHHHhHHhhhhhcccchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEECCEEEEEeccccccccEEEE
Confidence 99999999999999999999999999888888888888888889999999888899999999999999999999999999
Q ss_pred cCCCCCCCCCCeecceeeEeeCeeEeeccCCCCCCcceeeccccCCCC---ccccccccCCCeeEEeeeeEeecCCCCCc
Q 003952 282 GRSSGQTGEDKSVPADMLILGGSAIVNEAILTGESTPQWKVSIMGRET---GEKLSARRDKSHVLFGGTKILQHTPDKTF 358 (784)
Q Consensus 282 ~~ge~d~~~~~~vPaD~ill~G~~~VdES~LTGES~Pv~K~~~~~~~~---~~~~~~~~~~~~~lf~GT~v~~~~~~~~~ 358 (784)
.++ +...|||++|++|+|+||||||||||+|+.|.|++...+ ......+.++.|++|+||+++|.+...
T Consensus 277 ~~~------~~~~PcDa~Li~g~civNEsmLTGESVPv~K~~l~~~~~~~~~~~~~~~~~~rh~lfcGT~vlq~r~~~-- 348 (1140)
T KOG0208|consen 277 PPP------GKIMPCDALLISGDCIVNESMLTGESVPVTKTPLPMGTDSLDSITISMSTNSRHTLFCGTKVLQARAYL-- 348 (1140)
T ss_pred CCC------CeEeecceEEEeCcEEeecccccCCcccccccCCccccccCcCeeechhhcCcceeeccceEEEeecCC--
Confidence 973 249999999999999999999999999999999873222 224445568899999999999987542
Q ss_pred CCCCCCCceEEEEEeeccccchhHHHHHhcccccccccchhHHHHHHHHHHHHHHHHhhheeecCcCCccchhHHHHHHH
Q 003952 359 PLKTPDGGCLAVVLRTGFETSQGKLMRTILFSTERVTANSWESGLFILFLVVFAVIAAGYVLKKGMEDPTRSKYKLFLSC 438 (784)
Q Consensus 359 ~~~~~~g~~~~~V~~TG~~T~~gkl~~~i~~~~~~~~~~~~~~~~fi~~ll~~aii~~~~~~~~~~~~~~~~~~~~~l~~ 438 (784)
++.++|+|+||||+|.+|+++|+|+++++..+.++++++.|++++.++|+++++|..+.... .+.+....++++
T Consensus 349 -----g~~v~a~V~RTGF~T~KGqLVRsilyPkP~~fkfyrds~~fi~~l~~ia~~gfiy~~i~l~~-~g~~~~~iiirs 422 (1140)
T KOG0208|consen 349 -----GGPVLAMVLRTGFSTTKGQLVRSILYPKPVNFKFYRDSFKFILFLVIIALIGFIYTAIVLNL-LGVPLKTIIIRS 422 (1140)
T ss_pred -----CCceEEEEEeccccccccHHHHhhcCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHhHhHHH-cCCCHHHHhhhh
Confidence 67899999999999999999999999999999999999999999999999988876543322 244567788999
Q ss_pred HhhhhcccCCcchHHHHHHHHHHHHHHHhcCceecCCCCcCcCCceeEEEecccCcccCCceEEEEEEecCCC-----c-
Q 003952 439 SLIITSVIPPELPMELSIAVNTSLIALARRGIFCTEPFRIPFAGKVDMCCFDKTGTLTSDDMEFRGVVGLSNA-----E- 512 (784)
Q Consensus 439 i~ii~~~vP~~Lp~~lslav~~s~~~l~k~~I~~~~~~~ie~lG~vd~icfDKTGTLT~~~m~v~~i~~~~~~-----~- 512 (784)
++++|.++||+||++++++..++..||.|+||||.+|++|+.+|++|++|||||||||++++++.++....+. .
T Consensus 423 LDliTi~VPPALPAaltvG~~~a~~RLkkk~IfCisP~rIn~~G~i~~~cFDKTGTLTEdGLDl~gv~~~~~~~~~~~~~ 502 (1140)
T KOG0208|consen 423 LDLITIVVPPALPAALTVGIIYAQSRLKKKGIFCISPQRINLCGKLNLVCFDKTGTLTEDGLDLWGVVPVERNVDDGPEL 502 (1140)
T ss_pred hcEEEEecCCCchhhhhHHHHHHHHHHHhcCeEEcCccceeecceeeEEEEcCCCcccccceeEEEEEeccccccccchh
Confidence 9999999999999999999999999999999999999999999999999999999999999999999875421 0
Q ss_pred -------------cccCCCCCc-HHHHHHHHhccceEeeCCcccCCHHHHHHHhccCccccCCC---c-------c----
Q 003952 513 -------------LEDDMTKVP-VRTQEILASCHALVFVDNKLVGDPLEKAALKGIDWSYKSDE---K-------A---- 564 (784)
Q Consensus 513 -------------~~~~~~~~~-~~~~~~la~chsl~~~~~~~~gdple~All~~~~~~~~~~~---~-------~---- 564 (784)
+..+....+ ......+|+|||+...+|.++|||+|..|+++.+|.+.+.+ . .
T Consensus 503 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~a~atCHSL~~v~g~l~GDPLdlkmfe~t~w~~ee~~~~~~~~~~~~~~~p~v 582 (1140)
T KOG0208|consen 503 KVVTEDSLQLFYKLSLRSSSLPMGNLVAAMATCHSLTLVDGTLVGDPLDLKMFESTGWVYEEADIEDEATREFNTLIPTV 582 (1140)
T ss_pred hhhhhhhccceeeccccccCCchHHHHHHHhhhceeEEeCCeeccCceeeeeeeccceEEEeccccchhhhhhCCccCCE
Confidence 001111112 25567899999999999999999999999999999985421 0 0
Q ss_pred -ccC----CC----CCcceeEEEEEccCCCCCeeEEEEEEC--CEEEEEEeCchHHHHHhh--ccCchhHHHHHHHHhhc
Q 003952 565 -MPK----RG----GGNAVQIVQRHHFASHLKRMSVVVRVQ--EEFFAFVKGAPETIQDRL--TDLPSSYIETYKKYTHQ 631 (784)
Q Consensus 565 -~~~----~~----~~~~~~il~~~~Fss~~krmsviv~~~--~~~~~~~KGapE~I~~~~--~~~p~~~~~~~~~~~~~ 631 (784)
.+. ++ ....+.++++|||+|++||||||++.. ++.++|+|||||.|.+.| .++|.+|.+.++.|+.+
T Consensus 583 ~~p~~~~~~~~t~~~~~~~si~k~feF~S~LrRMSVIv~~~~e~~~~~ftKGaPE~I~~ic~p~tvP~dy~evl~~Yt~~ 662 (1140)
T KOG0208|consen 583 VRPPENAFNQSTECGEGEISIVKQFEFSSALRRMSVIVSTGGEDKMMVFTKGAPESIAEICKPETVPADYQEVLKEYTHQ 662 (1140)
T ss_pred eCCCcccccCCCcCCCcceEEEEecccchhhheEEEEEecCCCCceEeeccCCHHHHHHhcCcccCCccHHHHHHHHHhC
Confidence 010 11 112589999999999999999999987 478999999999999999 56899999999999999
Q ss_pred cCeEEEEEEEeCCCCChhhHhhhhhhhccCCcEEEEEEeecCCCCcchHHHHHHHhhCCCcEEEEcCCCHHHHHHHHHHc
Q 003952 632 GSRVLALAFKSLPDMTVSDARSLHRDEVENGLTFAGFAVFNCPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQV 711 (784)
Q Consensus 632 G~Rvlala~k~l~~~~~~~~~~~~r~~~E~~l~flG~l~~~d~lr~da~~~I~~L~~agi~v~MITGDn~~TA~~VA~~~ 711 (784)
|+||+|+|+|+++.....+.++++|+.+|+||+|+|+++|+|+||++++.+|++|++|+||++|+||||.+||++|||+|
T Consensus 663 GfRVIAlA~K~L~~~~~~~~~~~~Rd~vEs~l~FlGLiVmeNkLK~~T~~VI~eL~~AnIRtVMcTGDNllTaisVakeC 742 (1140)
T KOG0208|consen 663 GFRVIALASKELETSTLQKAQKLSRDTVESNLEFLGLIVMENKLKEETKRVIDELNRANIRTVMCTGDNLLTAISVAKEC 742 (1140)
T ss_pred CeEEEEEecCccCcchHHHHhhccHhhhhccceeeEEEEeecccccccHHHHHHHHhhcceEEEEcCCchheeeehhhcc
Confidence 99999999999987778899999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCC-cEEEecC-----CCCCeeEEeCCCccccccc----ch--hh----hh-ccCCCeeEEEechhHHHHhcC--ch
Q 003952 712 HIVTKP-VLILCPV-----KNGKVYEWVSPDETEKIQY----SE--KE----VE-GLTDAHDLCIGGDCFEMLQQT--SA 772 (784)
Q Consensus 712 gI~~~~-~~il~~~-----~~~~~~~~~~~~~~~~~~~----~~--~~----~~-~l~~~~~l~~tGd~l~~l~~~--~~ 772 (784)
||+... ..++.+. +....+.|..+++.+.... ++ .. .+ ...+.|++||+|+.+..+.++ +.
T Consensus 743 gmi~p~~~v~~~~~~~~~~~~~~~i~w~~ve~~~~~~~~~~~~~~~~~~~~~~d~~~~~~yhlA~sG~~f~~i~~~~~~l 822 (1140)
T KOG0208|consen 743 GMIEPQVKVIIPELEPPEDDSIAQIVWLCVESQTQFLDPKEPDPDLASVKLSLDVLSEKDYHLAMSGKTFQVILEHFPEL 822 (1140)
T ss_pred cccCCCCeEEEEeccCCccCCCceeEEEEccCccccCCCCccCccccCCccChhhhccceeEEEecCchhHHHHhhcHHH
Confidence 999554 4444321 2235689988886554321 11 00 11 223568999999999999976 56
Q ss_pred HhhhccccEEeC
Q 003952 773 VLRVIPYVKVLK 784 (784)
Q Consensus 773 ~~~~~~~~~VfA 784 (784)
+.+++.++.|||
T Consensus 823 ~~~Il~~~~VfA 834 (1140)
T KOG0208|consen 823 VPKILLKGTVFA 834 (1140)
T ss_pred HHHHHhcCeEEe
Confidence 889999999998
No 4
>COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.6e-87 Score=811.83 Aligned_cols=577 Identities=27% Similarity=0.362 Sum_probs=450.7
Q ss_pred hhhhhhhc-CCCCCHHHHHHHHhcCCCCccCCCC-ccHHHHHHHHhhhhHHHHHHHhhhhcccchhh----hhHHHHHHH
Q 003952 155 TFGYYLKC-TGHSTEAKIAVATEKWGRNVFEYPQ-PTFQKLMKENCMEPFFVFQVFCVGLWCLDEYW----YYSLFTLFM 228 (784)
Q Consensus 155 ~~~~~~~~-~g~l~~~~v~~~~~~yG~N~~~~~~-~s~~~ll~~~~~~pf~vfqi~~~~lw~l~~y~----~~~~~~l~~ 228 (784)
.+.++..+ ..|++++|+.+|++.||.|+++..+ .+++..|..++.+||..+++.+.++.+.-+.| .++.+++++
T Consensus 33 ~~~~~~~~~~~GLs~~e~~~r~~~~G~N~~~~~~~~~~~~~fl~~f~~~~~~iL~~~a~~s~~~~~~~~~~~~~~~I~~~ 112 (917)
T COG0474 33 LLLELFTSPTTGLSEEEVKRRLKKYGPNELPEEKKRSLLKKFLRQFKDPFIILLLVAALLSAFVGDWVDAGVDAIVILLV 112 (917)
T ss_pred HHHhhcCCcccCCCHHHHHHHHhhcCCccccccccCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCcceeeehHH
Confidence 33444333 3567889999999999999999765 59999999999999988888777665554444 344444444
Q ss_pred HHHHHHHHHHHHHHH---HHHHHhhhhCCceEEEEEcCeEEEeecCCCCCCcEEEEcCCCCCCCCCCeecceeeEeeCee
Q 003952 229 LFMFESTMAKSRLKT---LTEIRRVRVDNQTIMVHRCGKWVKLAGTDLVPGDVVSIGRSSGQTGEDKSVPADMLILGGSA 305 (784)
Q Consensus 229 l~~~~~~~~~~~~~~---~~~l~~~~~~~~~v~V~R~g~~~~I~s~~LvpGDiV~i~~ge~d~~~~~~vPaD~ill~G~~ 305 (784)
+++.......|..|+ +++|++|. +.+++|+|||+|++|+++||||||||.++.|+ .||||++|+++++
T Consensus 113 i~~n~~~g~~qe~~a~~~l~~lk~~~--~~~~~V~R~g~~~~i~a~eLVpGDiV~l~~gd-------~vPAD~rLl~~~~ 183 (917)
T COG0474 113 VVINALLGFVQEYRAEKALEALKKMS--SPKAKVLRDGKFVEIPASELVPGDIVLLEAGD-------VVPADLRLLESSD 183 (917)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhc--cCceEEEeCCcEEEecHHHCCCCcEEEECCCC-------ccccceEEEEecC
Confidence 444444445555444 66666665 67899999999999999999999999999776 9999999999987
Q ss_pred -EeeccCCCCCCcceeeccccCCCCccccccccCCCeeEEeeeeEeecCCCCCcCCCCCCCceEEEEEeeccccchhHHH
Q 003952 306 -IVNEAILTGESTPQWKVSIMGRETGEKLSARRDKSHVLFGGTKILQHTPDKTFPLKTPDGGCLAVVLRTGFETSQGKLM 384 (784)
Q Consensus 306 -~VdES~LTGES~Pv~K~~~~~~~~~~~~~~~~~~~~~lf~GT~v~~~~~~~~~~~~~~~g~~~~~V~~TG~~T~~gkl~ 384 (784)
.||||+|||||.|+.|.+.+....+.... .++.|++|+||.|. .|.+.|+|++||++|.+|++.
T Consensus 184 l~VdEs~LTGES~pv~K~~~~~~~~~~~~~--~d~~n~l~sGt~V~-------------~G~~~giVvaTG~~T~~G~ia 248 (917)
T COG0474 184 LEVDESALTGESLPVEKQALPLTKSDAPLG--LDRDNMLFSGTTVV-------------SGRAKGIVVATGFETEFGKIA 248 (917)
T ss_pred ceEEcccccCCCcchhcccccccccccccc--CCccceEEeCCEEE-------------cceEEEEEEEEcCccHHHHHH
Confidence 99999999999999999865543222222 24689999999999 799999999999999999999
Q ss_pred HHhcccccccccchhHHHHHHHHHHHHHHHHhhheeecCcCCccchhHHHHHHHHhhhhcccCCcchHHHHHHHHHHHHH
Q 003952 385 RTILFSTERVTANSWESGLFILFLVVFAVIAAGYVLKKGMEDPTRSKYKLFLSCSLIITSVIPPELPMELSIAVNTSLIA 464 (784)
Q Consensus 385 ~~i~~~~~~~~~~~~~~~~fi~~ll~~aii~~~~~~~~~~~~~~~~~~~~~l~~i~ii~~~vP~~Lp~~lslav~~s~~~ 464 (784)
+.+....+..+++++....+..+++.++++++++++..++......+...++.++.+++++||++||+.++++.+.+..+
T Consensus 249 ~~~~~~~~~~t~l~~~l~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~l~va~IPegLp~~vti~la~g~~~ 328 (917)
T COG0474 249 RLLPTKKEVKTPLQRKLNKLGKFLLVLALVLGALVFVVGLFRGGNGLLESFLTALALAVAAVPEGLPAVVTIALALGAQR 328 (917)
T ss_pred HhhccccccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHH
Confidence 99988767788999999999888888888877776655433212226788999999999999999999999999999999
Q ss_pred HHhcCceecCCCCcCcCCceeEEEecccCcccCCceEEEEEEecC-CCccccCCCCC---cHHHHHHHHhccceEeeC--
Q 003952 465 LARRGIFCTEPFRIPFAGKVDMCCFDKTGTLTSDDMEFRGVVGLS-NAELEDDMTKV---PVRTQEILASCHALVFVD-- 538 (784)
Q Consensus 465 l~k~~I~~~~~~~ie~lG~vd~icfDKTGTLT~~~m~v~~i~~~~-~~~~~~~~~~~---~~~~~~~la~chsl~~~~-- 538 (784)
|+|++++|+++.++|.+|++|++|+|||||||+|+|+|++++..+ ..+........ ..+....++.||+.....
T Consensus 329 mak~~~ivr~l~avE~LG~v~vICsDKTGTLTqN~M~v~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~lc~~~~~~~~~ 408 (917)
T COG0474 329 MAKDNAIVRSLNAIETLGSVDVICSDKTGTLTQNKMTVKKIYINGGGKDIDDKDLKDSPALLRFLLAAALCNSVTPEKNG 408 (917)
T ss_pred HHhccchhhccchhhhccCccEEEecCCCCCccCeEEEEEEEeCCCcccccccccccchHHHHHHHHHHhcCcccccccC
Confidence 999999999999999999999999999999999999999999874 22111000011 113456778999887543
Q ss_pred CcccCCHHHHHHHhccCccccCCCccccCCCCCcceeEEEEEccCCCCCeeEEEEEE-CCEEEEEEeCchHHHHHhhcc-
Q 003952 539 NKLVGDPLEKAALKGIDWSYKSDEKAMPKRGGGNAVQIVQRHHFASHLKRMSVVVRV-QEEFFAFVKGAPETIQDRLTD- 616 (784)
Q Consensus 539 ~~~~gdple~All~~~~~~~~~~~~~~~~~~~~~~~~il~~~~Fss~~krmsviv~~-~~~~~~~~KGapE~I~~~~~~- 616 (784)
....|||+|.|+++++.+.-... ........+++++.+||+|++|||||+++. ++++++++|||||.|.++|..
T Consensus 409 ~~~~gdptE~Al~~~a~~~~~~~----~~~~~~~~~~~~~~~PFdS~rKrMsviv~~~~~~~~~~~KGApe~il~~~~~~ 484 (917)
T COG0474 409 WYQAGDPTEGALVEFAEKLGFSL----DLSGLEVEYPILAEIPFDSERKRMSVIVKTDEGKYILFVKGAPEVILERCKSI 484 (917)
T ss_pred ceecCCccHHHHHHHHHhcCCcC----CHHHHhhhcceeEEecCCCCceEEEEEEEcCCCcEEEEEcCChHHHHHHhccc
Confidence 34589999999999886532210 111122345789999999999999999984 445899999999999999962
Q ss_pred ---------CchhHHHHHHHHhhccCeEEEEEEEeCCCCChhhHhhhhhhhccCCcEEEEEEeecCCCCcchHHHHHHHh
Q 003952 617 ---------LPSSYIETYKKYTHQGSRVLALAFKSLPDMTVSDARSLHRDEVENGLTFAGFAVFNCPIREDSAKILSELK 687 (784)
Q Consensus 617 ---------~p~~~~~~~~~~~~~G~Rvlala~k~l~~~~~~~~~~~~r~~~E~~l~flG~l~~~d~lr~da~~~I~~L~ 687 (784)
.++.+.+..++|+++|+||+++|||.++....... . ++.|+||+|+|+++|+||||+|++++|+.|+
T Consensus 485 ~~~~~~~~~~~~~~~~~~~~la~~glRvla~A~k~~~~~~~~~~---~-~~~E~dl~~lGl~g~~Dppr~~v~~aI~~l~ 560 (917)
T COG0474 485 GELEPLTEEGLRTLEEAVKELASEGLRVLAVAYKKLDRAEKDDE---V-DEIESDLVFLGLTGIEDPPREDVKEAIEELR 560 (917)
T ss_pred CcccccCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcccccch---h-hhhhccceeehhhhccCCCCccHHHHHHHHH
Confidence 35678889999999999999999997754332211 1 7889999999999999999999999999999
Q ss_pred hCCCcEEEEcCCCHHHHHHHHHHcccccCCc--EEEecCCCCCeeEEeCCCccc----c-------cc-cchhhhhccCC
Q 003952 688 NSSQDLAMITGDQALTACYVASQVHIVTKPV--LILCPVKNGKVYEWVSPDETE----K-------IQ-YSEKEVEGLTD 753 (784)
Q Consensus 688 ~agi~v~MITGDn~~TA~~VA~~~gI~~~~~--~il~~~~~~~~~~~~~~~~~~----~-------~~-~~~~~~~~l~~ 753 (784)
+|||++|||||||++||.+||++|||..... .+++- ..+...+.++.. . .| -|...++.+++
T Consensus 561 ~AGI~v~MiTGD~~~TA~aIa~~~Gi~~~~~~~~vi~G----~el~~l~~~el~~~~~~~~VfARvsP~qK~~IV~~lq~ 636 (917)
T COG0474 561 EAGIKVWMITGDHVETAIAIAKECGIEAEAESALVIDG----AELDALSDEELAELVEELSVFARVSPEQKARIVEALQK 636 (917)
T ss_pred HCCCcEEEECCCCHHHHHHHHHHcCCCCCCCceeEeeh----HHhhhcCHHHHHHHhhhCcEEEEcCHHHHHHHHHHHHh
Confidence 9999999999999999999999999986542 35421 112211111100 0 01 13344667777
Q ss_pred Cee-EEEechhHHHH
Q 003952 754 AHD-LCIGGDCFEML 767 (784)
Q Consensus 754 ~~~-l~~tGd~l~~l 767 (784)
.++ ++|||||.|+.
T Consensus 637 ~g~vVamtGDGvNDa 651 (917)
T COG0474 637 SGHVVAMTGDGVNDA 651 (917)
T ss_pred CCCEEEEeCCCchhH
Confidence 655 88999999987
No 5
>TIGR01523 ATPase-IID_K-Na potassium and/or sodium efflux P-type ATPase, fungal-type. The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump.
Probab=100.00 E-value=2.4e-84 Score=791.16 Aligned_cols=541 Identities=20% Similarity=0.241 Sum_probs=418.6
Q ss_pred CchhhhhhhhcC-CCCCHHHHHHHHhcCCCCccCCCC-ccHHHHHHHHhhhhHHHHHHHhhhhcccchhhhhHHHHHHHH
Q 003952 152 TKETFGYYLKCT-GHSTEAKIAVATEKWGRNVFEYPQ-PTFQKLMKENCMEPFFVFQVFCVGLWCLDEYWYYSLFTLFML 229 (784)
Q Consensus 152 ~~~~~~~~~~~~-g~l~~~~v~~~~~~yG~N~~~~~~-~s~~~ll~~~~~~pf~vfqi~~~~lw~l~~y~~~~~~~l~~l 229 (784)
.++.++.+.++. .|||++|+++|+++||+|+++.++ +++|.+|.+++.+||.++++++.+++++..+|.+++++++++
T Consensus 12 ~~~v~~~l~t~~~~GLs~~ea~~rl~~~G~N~l~~~~~~s~~~~~l~q~~~~~~~iL~~aails~~~~~~~~~~iIl~vv 91 (1053)
T TIGR01523 12 ADEAAEFIGTSIPEGLTHDEAQHRLKEVGENRLEADSGIDAKAMLLHQVCNAMCMVLIIAAAISFAMHDWIEGGVISAII 91 (1053)
T ss_pred HHHHHHHhCcCcccCCCHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHHhCHHHHHHHHHHHHHHHHhhHHHHHHHHhHH
Confidence 456677777663 567899999999999999999886 689999999999999999999999998888898888888877
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhh-CCceEEEEEcCeEEEeecCCCCCCcEEEEcCCCCCCCCCCeecceeeEeeC-eeEe
Q 003952 230 FMFESTMAKSRLKTLTEIRRVRV-DNQTIMVHRCGKWVKLAGTDLVPGDVVSIGRSSGQTGEDKSVPADMLILGG-SAIV 307 (784)
Q Consensus 230 ~~~~~~~~~~~~~~~~~l~~~~~-~~~~v~V~R~g~~~~I~s~~LvpGDiV~i~~ge~d~~~~~~vPaD~ill~G-~~~V 307 (784)
++...+..+|..++.+.++++.. .+.+++|+|||++++|+++||||||||.++.|+ +|||||+|+++ ++.|
T Consensus 92 ~in~~i~~~QE~~aekal~aL~~l~~~~~~ViRdg~~~~I~a~eLVpGDIv~L~~Gd-------~VPAD~rLi~~~~L~V 164 (1053)
T TIGR01523 92 ALNILIGFIQEYKAEKTMDSLKNLASPMAHVIRNGKSDAIDSHDLVPGDICLLKTGD-------TIPADLRLIETKNFDT 164 (1053)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccCCCceEEEeCCeeeecCHhhCCCCCEEEECCCC-------EeeccEEEEEeCceEE
Confidence 77777777776665555555444 356899999999999999999999999999776 99999999997 5999
Q ss_pred eccCCCCCCcceeeccccCCCCccccccccCCCeeEEeeeeEeecCCCCCcCCCCCCCceEEEEEeeccccchhHHHHHh
Q 003952 308 NEAILTGESTPQWKVSIMGRETGEKLSARRDKSHVLFGGTKILQHTPDKTFPLKTPDGGCLAVVLRTGFETSQGKLMRTI 387 (784)
Q Consensus 308 dES~LTGES~Pv~K~~~~~~~~~~~~~~~~~~~~~lf~GT~v~~~~~~~~~~~~~~~g~~~~~V~~TG~~T~~gkl~~~i 387 (784)
|||+|||||.|+.|.+.+....+. -....++.|++|+||.|. +|.+.|+|++||.+|..||+.+++
T Consensus 165 DES~LTGES~pV~K~~~~~~~~~~-~~~~~d~~n~lf~GT~V~-------------~G~g~~vVvatG~~T~~GkIa~~~ 230 (1053)
T TIGR01523 165 DEALLTGESLPVIKDAHATFGKEE-DTPIGDRINLAFSSSAVT-------------KGRAKGICIATALNSEIGAIAAGL 230 (1053)
T ss_pred EchhhcCCCCceeccccccccccc-cCCcccCCCccccCceEE-------------eeeEEEEEEEecCccHHHHHHHHH
Confidence 999999999999998632211000 011235689999999999 899999999999999999999987
Q ss_pred ccccc-----------------------------------ccccchhHHHHHHHHHHHHHHHHhhheeecCcCCccchhH
Q 003952 388 LFSTE-----------------------------------RVTANSWESGLFILFLVVFAVIAAGYVLKKGMEDPTRSKY 432 (784)
Q Consensus 388 ~~~~~-----------------------------------~~~~~~~~~~~fi~~ll~~aii~~~~~~~~~~~~~~~~~~ 432 (784)
...++ ..++.++....+..++.+++++.+..++..+.. ....
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tpLq~~l~~l~~~l~~i~~~~~~~~~~~~~~---~~~~ 307 (1053)
T TIGR01523 231 QGDGGLFQRPEKDDPNKRRKLNKWILKVTKKVTGAFLGLNVGTPLHRKLSKLAVILFCIAIIFAIIVMAAHKF---DVDK 307 (1053)
T ss_pred hhhhhccccccccccccchhhhcccccccccchhhccccCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhh---hhhH
Confidence 43211 126677776666665555554443333322211 1123
Q ss_pred HHHHHHHhhhhcccCCcchHHHHHHHHHHHHHHHhcCceecCCCCcCcCCceeEEEecccCcccCCceEEEEEEecCC--
Q 003952 433 KLFLSCSLIITSVIPPELPMELSIAVNTSLIALARRGIFCTEPFRIPFAGKVDMCCFDKTGTLTSDDMEFRGVVGLSN-- 510 (784)
Q Consensus 433 ~~~l~~i~ii~~~vP~~Lp~~lslav~~s~~~l~k~~I~~~~~~~ie~lG~vd~icfDKTGTLT~~~m~v~~i~~~~~-- 510 (784)
..++.++.+++++||++||+.++++++.+..||+|++++++++.++|.||+++++|+|||||||+|+|+|..++..+.
T Consensus 308 ~~~~~av~l~Va~VPegLp~~vti~La~g~~rMak~~~lVr~L~avEtLG~vtvICsDKTGTLT~N~M~V~~i~~~~~~~ 387 (1053)
T TIGR01523 308 EVAIYAICLAISIIPESLIAVLSITMAMGAANMSKRNVIVRKLDALEALGAVNDICSDKTGTITQGKMIARQIWIPRFGT 387 (1053)
T ss_pred HHHHHHHHHHHHHcccchHHHHHHHHHHHHHHHHhcCCEeccchhhhhccCccEEEecCcCccccceEEEEEEEEcCCce
Confidence 456677889999999999999999999999999999999999999999999999999999999999999998864210
Q ss_pred -------CccccC------------------------C--------C--C-----C---cHHHHHHHHhccceEeeC---
Q 003952 511 -------AELEDD------------------------M--------T--K-----V---PVRTQEILASCHALVFVD--- 538 (784)
Q Consensus 511 -------~~~~~~------------------------~--------~--~-----~---~~~~~~~la~chsl~~~~--- 538 (784)
..+.+. . . + . ........+.||+....+
T Consensus 388 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~lcn~a~~~~~~~ 467 (1053)
T TIGR01523 388 ISIDNSDDAFNPNEGNVSGIPRFSPYEYSHNEAADQDILKEFKDELKEIDLPEDIDMDLFIKLLETAALANIATVFKDDA 467 (1053)
T ss_pred EEecCCCCCCCCcccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHhccCCeeeccCC
Confidence 000000 0 0 0 0 012344567788766432
Q ss_pred -C--cccCCHHHHHHHhccC-ccccCC-----Ccccc-------------CCCCCcceeEEEEEccCCCCCeeEEEEEEC
Q 003952 539 -N--KLVGDPLEKAALKGID-WSYKSD-----EKAMP-------------KRGGGNAVQIVQRHHFASHLKRMSVVVRVQ 596 (784)
Q Consensus 539 -~--~~~gdple~All~~~~-~~~~~~-----~~~~~-------------~~~~~~~~~il~~~~Fss~~krmsviv~~~ 596 (784)
+ +..|||+|.|+++++. +.+... ..... ..+....+++++++||+|++||||++++.+
T Consensus 468 ~~~~~~~GdptE~ALl~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pFds~rK~msvv~~~~ 547 (1053)
T TIGR01523 468 TDCWKAHGDPTEIAIHVFAKKFDLPHNALTGEEDLLKSNENDQSSLSQHNEKPGSAQFEFIAEFPFDSEIKRMASIYEDN 547 (1053)
T ss_pred CCceeeCcCccHHHHHHHHHHcCCCcccccchhhhhhhccccccccccccccccccccceEEEeccCCCCCeEEEEEEeC
Confidence 1 3579999999998752 222100 00000 001124578999999999999999999875
Q ss_pred -C-EEEEEEeCchHHHHHhhccC---------------chhHHHHHHHHhhccCeEEEEEEEeCCCCChh--hH--hhhh
Q 003952 597 -E-EFFAFVKGAPETIQDRLTDL---------------PSSYIETYKKYTHQGSRVLALAFKSLPDMTVS--DA--RSLH 655 (784)
Q Consensus 597 -~-~~~~~~KGapE~I~~~~~~~---------------p~~~~~~~~~~~~~G~Rvlala~k~l~~~~~~--~~--~~~~ 655 (784)
+ ++++++|||||.|+++|... ++.+.+..++|+++|+||||+|||.++..+.. .. ...+
T Consensus 548 ~~~~~~~~~KGApe~il~~c~~~~~~~~~~~~~l~~~~~~~i~~~~~~~a~~GlRvLa~A~r~l~~~~~~~~~~~~~~~~ 627 (1053)
T TIGR01523 548 HGETYNIYAKGAFERIIECCSSSNGKDGVKISPLEDCDRELIIANMESLAAEGLRVLAFASKSFDKADNNDDQLKNETLN 627 (1053)
T ss_pred CCCEEEEEEeCChHHHHHhhhHhhcCCCCccccCCHHHHHHHHHHHHHHHhcCCeEEEEEEEECCchhccchhhhccccc
Confidence 3 47899999999999999531 23466778899999999999999998643211 11 1124
Q ss_pred hhhccCCcEEEEEEeecCCCCcchHHHHHHHhhCCCcEEEEcCCCHHHHHHHHHHcccccC
Q 003952 656 RDEVENGLTFAGFAVFNCPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTK 716 (784)
Q Consensus 656 r~~~E~~l~flG~l~~~d~lr~da~~~I~~L~~agi~v~MITGDn~~TA~~VA~~~gI~~~ 716 (784)
|+.+|+||+|+|+++|+||+|+|++++|+.||++||+|+||||||+.||.+||+++||.+.
T Consensus 628 ~~~~e~~L~~~G~~~~~Dp~r~~v~~aI~~l~~aGIkv~MiTGD~~~tA~~iA~~~Gi~~~ 688 (1053)
T TIGR01523 628 RATAESDLEFLGLIGIYDPPRNESAGAVEKCHQAGINVHMLTGDFPETAKAIAQEVGIIPP 688 (1053)
T ss_pred hhhhccCCEEEEEEeeecCCchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCc
Confidence 6778999999999999999999999999999999999999999999999999999999853
No 6
>KOG0202 consensus Ca2+ transporting ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.2e-83 Score=715.19 Aligned_cols=596 Identities=22% Similarity=0.292 Sum_probs=446.0
Q ss_pred CCCchhhhhhhhcC-CCCCHHHHHHHHhcCCCCccCCCC-ccHHHHHHHHhhhhHHHHHHHhhhhcccchhhhhHHHHHH
Q 003952 150 YPTKETFGYYLKCT-GHSTEAKIAVATEKWGRNVFEYPQ-PTFQKLMKENCMEPFFVFQVFCVGLWCLDEYWYYSLFTLF 227 (784)
Q Consensus 150 ~~~~~~~~~~~~~~-g~l~~~~v~~~~~~yG~N~~~~~~-~s~~~ll~~~~~~pf~vfqi~~~~lw~l~~y~~~~~~~l~ 227 (784)
.+.++.+++|..+. +||+.+|+.+|+++||.|+++.+. .++|+++.+||.+|+...++.+.++.+....|..++.+.+
T Consensus 7 ~~v~e~~~~f~t~~~~GLt~~ev~~r~~~yG~Nel~~ee~~~~wk~vLeQF~n~Li~iLL~sA~ISfvl~~~~e~~vI~l 86 (972)
T KOG0202|consen 7 KSVSEVLAEFGTDLEEGLTSDEVTRRRKKYGENELPAEEGESLWKLVLEQFDNPLILILLLSAAISFVLADFDEPFVITL 86 (972)
T ss_pred CcHHHHHHHhCcCcccCCCHHHHHHHHHhcCCccCccccCCcHHHHHHHHHHhHHHHHHHHHHHHHHHHHhcccceeeee
Confidence 34567788887764 688999999999999999999875 6999999999999999999998888877777777766666
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhh-CCceEEEEEcCeEEEeecCCCCCCcEEEEcCCCCCCCCCCeecceeeEeeC-ee
Q 003952 228 MLFMFESTMAKSRLKTLTEIRRVRV-DNQTIMVHRCGKWVKLAGTDLVPGDVVSIGRSSGQTGEDKSVPADMLILGG-SA 305 (784)
Q Consensus 228 ~l~~~~~~~~~~~~~~~~~l~~~~~-~~~~v~V~R~g~~~~I~s~~LvpGDiV~i~~ge~d~~~~~~vPaD~ill~G-~~ 305 (784)
++++.....++|.+++.+.|..++. .|..++|+|+|+.+.++++||||||||.++-|+ +||||.+|++- +.
T Consensus 87 iiv~nvtVG~~QEy~aEkalEaLk~l~p~~~~V~R~gk~~~i~A~eLVPGDiV~l~vGD-------kVPADlRl~e~~sl 159 (972)
T KOG0202|consen 87 IIVINVTVGFVQEYNAEKALEALKELVPPMAHVLRSGKLQHILARELVPGDIVELKVGD-------KIPADLRLIEAKSL 159 (972)
T ss_pred eeeeeeeeeeeeehhhHHHHHHHHhcCCccceEEecCcccceehhccCCCCEEEEecCC-------ccccceeEEeeeee
Confidence 5555444445666555555444444 588999999999999999999999999999876 99999999985 58
Q ss_pred EeeccCCCCCCcceeeccccCCCCccccccccCCCeeEEeeeeEeecCCCCCcCCCCCCCceEEEEEeeccccchhHHHH
Q 003952 306 IVNEAILTGESTPQWKVSIMGRETGEKLSARRDKSHVLFGGTKILQHTPDKTFPLKTPDGGCLAVVLRTGFETSQGKLMR 385 (784)
Q Consensus 306 ~VdES~LTGES~Pv~K~~~~~~~~~~~~~~~~~~~~~lf~GT~v~~~~~~~~~~~~~~~g~~~~~V~~TG~~T~~gkl~~ 385 (784)
.||||.|||||.|+.|..-.... +.-....+|.|++|+||.|. .|.++|+|+.||.+|..|++.+
T Consensus 160 ~iDeS~LTGEs~pv~K~t~~v~~--~~~~~~~dk~NiaFsGT~V~-------------~G~a~GIVi~TG~nTeiG~I~~ 224 (972)
T KOG0202|consen 160 RIDESSLTGESEPVSKDTDAVPK--DENADVQDKKNIAFSGTLVV-------------AGRAKGIVIGTGLNTEIGKIFK 224 (972)
T ss_pred eeecccccCCcccccccCccccC--CCCCccccceeeEeecceee-------------cCceeEEEEeccccchHHHHHH
Confidence 99999999999999997533221 11111236899999999999 8999999999999999999999
Q ss_pred HhcccccccccchhHHHHHHHHHH-HHHHHHhhheee-cCc-CCc---c---chhHHHHHHHHhhhhcccCCcchHHHHH
Q 003952 386 TILFSTERVTANSWESGLFILFLV-VFAVIAAGYVLK-KGM-EDP---T---RSKYKLFLSCSLIITSVIPPELPMELSI 456 (784)
Q Consensus 386 ~i~~~~~~~~~~~~~~~~fi~~ll-~~aii~~~~~~~-~~~-~~~---~---~~~~~~~l~~i~ii~~~vP~~Lp~~lsl 456 (784)
+|....+.+++.++....|-..|. +++++..+.|+. .|. .++ + +.....|--++.+.+++||++||+.+++
T Consensus 225 ~m~~~e~~kTPLqk~ld~~G~qLs~~is~i~v~v~~~nig~f~~p~~~g~~fk~~~~~f~IaVsLAVAAIPEGLPaVvT~ 304 (972)
T KOG0202|consen 225 MMQATESPKTPLQKKLDEFGKQLSKVISFICVGVWLLNIGHFLDPVHGGSWFKGALYYFKIAVSLAVAAIPEGLPAVVTT 304 (972)
T ss_pred HHhccCCCCCcHHHHHHHHHHHHHHHheehhhhHHHhhhhhhccccccccchhchhhhhhHHHHHHHHhccCCCcchhhh
Confidence 998877778888876655544443 333222222221 111 111 1 3334456667888999999999999999
Q ss_pred HHHHHHHHHHhcCceecCCCCcCcCCceeEEEecccCcccCCceEEEEEEecCCC--cc----------c------cCC-
Q 003952 457 AVNTSLIALARRGIFCTEPFRIPFAGKVDMCCFDKTGTLTSDDMEFRGVVGLSNA--EL----------E------DDM- 517 (784)
Q Consensus 457 av~~s~~~l~k~~I~~~~~~~ie~lG~vd~icfDKTGTLT~~~m~v~~i~~~~~~--~~----------~------~~~- 517 (784)
+++.+.+||+|++.++|....+|.||.++++|.|||||||+|+|.+..++..+.. +. . .+.
T Consensus 305 tLALG~~rMakknaIVRkLPsVETLGc~~VICSDKTGTLTtN~Mtv~~i~~~~~~~~~~~~f~~tg~ty~~~g~v~~~~~ 384 (972)
T KOG0202|consen 305 TLALGTRRMAKKNAIVRKLPSVETLGCVNVICSDKTGTLTTNQMTVSKIFIPDGGTATVDEFNPTGTTYSPEGEVFKDGL 384 (972)
T ss_pred hHHHhHHHHHhhhhhhhcccchhhccceeEEecCCCCcccccceEEEEEEecccccccccccccCCceeCCCCceEecCc
Confidence 9999999999999999999999999999999999999999999999999865421 00 0 000
Q ss_pred CCC--------cHHHHHHHHhccceEeeCCcc-----cCCHHHHHHHhccC-ccccCCC--ccccCCC------CCccee
Q 003952 518 TKV--------PVRTQEILASCHALVFVDNKL-----VGDPLEKAALKGID-WSYKSDE--KAMPKRG------GGNAVQ 575 (784)
Q Consensus 518 ~~~--------~~~~~~~la~chsl~~~~~~~-----~gdple~All~~~~-~~~~~~~--~~~~~~~------~~~~~~ 575 (784)
... -.+...+.+.||......+.. .|.|+|.|+...+. ..+.... ......+ -...++
T Consensus 385 ~~~~~~~~~~~l~~l~~i~~lCNda~v~~~~~~~~~~~G~pTE~AL~vlaeKm~l~~~~~~~~s~~~~~~c~~~~~~~~~ 464 (972)
T KOG0202|consen 385 YEKDKAGDNDLLQELAEICALCNDATVEYNDADCYEKVGEPTEGALIVLAEKMGLPGTRSTNLSNEEASACNRVYSRLFK 464 (972)
T ss_pred cccccccccHHHHHHHHHHHhhhhhhhhcCchhhHHhcCCchHHHHHHHHHHcCCCcchhhcccccccccchhHHHHhhh
Confidence 000 123345667888777665555 89999999886542 1111111 0000000 012345
Q ss_pred EEEEEccCCCCCeeEEEEEECC---EEEEEEeCchHHHHHhhcc---------C------chhHHHHHHHHhhccCeEEE
Q 003952 576 IVQRHHFASHLKRMSVVVRVQE---EFFAFVKGAPETIQDRLTD---------L------PSSYIETYKKYTHQGSRVLA 637 (784)
Q Consensus 576 il~~~~Fss~~krmsviv~~~~---~~~~~~KGapE~I~~~~~~---------~------p~~~~~~~~~~~~~G~Rvla 637 (784)
....+||||++|+|||.+.... .+..|+|||||.|+++|.+ . .+.+.+...+|+++|+||||
T Consensus 465 ~~~elpFssdrK~Msv~c~~~~~~~~~~~fvKGA~E~Vl~rcs~~~~~~g~~~~pLt~~~re~il~~~~~~g~~gLRvLa 544 (972)
T KOG0202|consen 465 KIAELPFSSDRKSMSVKCSPAHGQSGYKMFVKGAPESVLERCSTYYGSDGQTKVPLTQASRETILANVYEMGSEGLRVLA 544 (972)
T ss_pred heeEeecccccceEEEEEecCCCCccceEEecCChHHHHHhhhcEEccCCceeeeCcHHHHHHHHHHHHHHhhccceEEE
Confidence 5689999999999999999643 3789999999999999932 1 24566778899999999999
Q ss_pred EEEEeCCCCCh---hhHhhhhhhhccCCcEEEEEEeecCCCCcchHHHHHHHhhCCCcEEEEcCCCHHHHHHHHHHcccc
Q 003952 638 LAFKSLPDMTV---SDARSLHRDEVENGLTFAGFAVFNCPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIV 714 (784)
Q Consensus 638 la~k~l~~~~~---~~~~~~~r~~~E~~l~flG~l~~~d~lr~da~~~I~~L~~agi~v~MITGDn~~TA~~VA~~~gI~ 714 (784)
+|+++.+.... +.....+|...|+||+|+|++++.||+|++++++|+.|++|||||+||||||+.||.+|||++||.
T Consensus 545 lA~~~~~~~~~~~~~l~~~s~~~~~E~~LtFvGlVGi~DPPR~ev~~ai~~c~~aGIrV~mITGD~~~TA~AI~r~iGi~ 624 (972)
T KOG0202|consen 545 LASKDSPGQVPDDQDLNDTSNRATAESDLTFVGLVGILDPPRPEVADAIELCRQAGIRVIMITGDNKETAEAIAREIGIF 624 (972)
T ss_pred EEccCCcccChhhhhhcccccccccccceEEEEEeeccCCCchhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHhCCC
Confidence 99998764222 223345788999999999999999999999999999999999999999999999999999999998
Q ss_pred cCCcEEEecCCCCCeeEEeCCCcccc------------cccchhhhhccCCCee-EEEechhHHHH
Q 003952 715 TKPVLILCPVKNGKVYEWVSPDETEK------------IQYSEKEVEGLTDAHD-LCIGGDCFEML 767 (784)
Q Consensus 715 ~~~~~il~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~l~~~~~-l~~tGd~l~~l 767 (784)
.....+-...-.++.+.-.+.++... -..|.+.++.|++... ++|||||.|..
T Consensus 625 ~~~ed~~~~~~TG~efD~ls~~~~~~~~~~~~vFaR~~P~HK~kIVeaLq~~geivAMTGDGVNDA 690 (972)
T KOG0202|consen 625 SEDEDVSSMALTGSEFDDLSDEELDDAVRRVLVFARAEPQHKLKIVEALQSRGEVVAMTGDGVNDA 690 (972)
T ss_pred cCCccccccccchhhhhcCCHHHHHHHhhcceEEEecCchhHHHHHHHHHhcCCEEEecCCCccch
Confidence 55442221111122222222221110 1124566778888877 77999999975
No 7
>PRK10517 magnesium-transporting ATPase MgtA; Provisional
Probab=100.00 E-value=1.7e-81 Score=757.17 Aligned_cols=555 Identities=22% Similarity=0.275 Sum_probs=418.8
Q ss_pred CchhhhhhhhcCCCCCHHHHHHHHhcCCCCccCCCCc-cHHHHHHHHhhhhHHHHHHHhhh-hcccchhhhhHHHHHHHH
Q 003952 152 TKETFGYYLKCTGHSTEAKIAVATEKWGRNVFEYPQP-TFQKLMKENCMEPFFVFQVFCVG-LWCLDEYWYYSLFTLFML 229 (784)
Q Consensus 152 ~~~~~~~~~~~~g~l~~~~v~~~~~~yG~N~~~~~~~-s~~~ll~~~~~~pf~vfqi~~~~-lw~l~~y~~~~~~~l~~l 229 (784)
.++.++.+.++..|||++|+++|+++||+|+++.+++ ++|++|++++.+||+++++++.+ .|++++ |..++++++++
T Consensus 54 ~~~v~~~l~~~~~GLs~~ea~~r~~~~G~N~l~~~~~~s~~~~~~~~~~~p~~~lL~~aa~ls~~~~~-~~~a~~I~~iv 132 (902)
T PRK10517 54 EEELWKTFDTHPEGLNEAEVESAREQHGENELPAQKPLPWWVHLWVCYRNPFNILLTILGAISYATED-LFAAGVIALMV 132 (902)
T ss_pred HHHHHHHhCCCCCCCCHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHhHHHHHHHHHHHHHHHHcc-HHHHHHHHHHH
Confidence 4456777766666789999999999999999998875 79999999999999988776544 455555 45677777777
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhh-CCceEEEEEc------CeEEEeecCCCCCCcEEEEcCCCCCCCCCCeecceeeEee
Q 003952 230 FMFESTMAKSRLKTLTEIRRVRV-DNQTIMVHRC------GKWVKLAGTDLVPGDVVSIGRSSGQTGEDKSVPADMLILG 302 (784)
Q Consensus 230 ~~~~~~~~~~~~~~~~~l~~~~~-~~~~v~V~R~------g~~~~I~s~~LvpGDiV~i~~ge~d~~~~~~vPaD~ill~ 302 (784)
++......++++|+.+.++++.. .+.+++|+|| |++++|+++||||||+|.|++|+ +|||||+|++
T Consensus 133 ~i~~~i~~~qe~ra~~~~~~L~~l~~~~a~ViR~g~~~~~g~~~~I~~~eLvpGDiV~l~~Gd-------~IPaDg~li~ 205 (902)
T PRK10517 133 AISTLLNFIQEARSTKAADALKAMVSNTATVLRVINDKGENGWLEIPIDQLVPGDIIKLAAGD-------MIPADLRILQ 205 (902)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEECCccCCCCeEEEEEHHhCCCCCEEEECCCC-------EEeeeEEEEE
Confidence 77666777777776666555544 4678999999 78999999999999999999887 9999999999
Q ss_pred Ce-eEeeccCCCCCCcceeeccccCCCCccccccccCCCeeEEeeeeEeecCCCCCcCCCCCCCceEEEEEeeccccchh
Q 003952 303 GS-AIVNEAILTGESTPQWKVSIMGRETGEKLSARRDKSHVLFGGTKILQHTPDKTFPLKTPDGGCLAVVLRTGFETSQG 381 (784)
Q Consensus 303 G~-~~VdES~LTGES~Pv~K~~~~~~~~~~~~~~~~~~~~~lf~GT~v~~~~~~~~~~~~~~~g~~~~~V~~TG~~T~~g 381 (784)
|+ +.||||+|||||.|+.|.+.+..+.+.. ..+++|++|+||.|. +|.+.++|++||.+|..|
T Consensus 206 g~~l~VDES~LTGES~PV~K~~~~~~~~~~~---~~~~~n~vfaGT~V~-------------~G~~~~vV~atG~~T~~G 269 (902)
T PRK10517 206 ARDLFVAQASLTGESLPVEKFATTRQPEHSN---PLECDTLCFMGTNVV-------------SGTAQAVVIATGANTWFG 269 (902)
T ss_pred cCceEEEecCcCCCCCceecccccccccccC---ccccccceeeCceEe-------------eeeEEEEEEEeccccHHH
Confidence 96 7999999999999999987432211111 124688999999999 899999999999999999
Q ss_pred HHHHHhcccccccccchhHHHHHHHHH----HHHHHHHhhheeecCcCCccchhHHHHHHHHhhhhcccCCcchHHHHHH
Q 003952 382 KLMRTILFSTERVTANSWESGLFILFL----VVFAVIAAGYVLKKGMEDPTRSKYKLFLSCSLIITSVIPPELPMELSIA 457 (784)
Q Consensus 382 kl~~~i~~~~~~~~~~~~~~~~fi~~l----l~~aii~~~~~~~~~~~~~~~~~~~~~l~~i~ii~~~vP~~Lp~~lsla 457 (784)
++.+.+..++..+++.++....+...+ ++++.+.+.+.+.. ..++...++.++.+++.++||+||++++++
T Consensus 270 kI~~~v~~~~~~~t~lq~~~~~i~~~l~~~~~~~~~~v~~i~~~~-----~~~~~~~l~~alsv~V~~~Pe~LP~~vt~~ 344 (902)
T PRK10517 270 QLAGRVSEQDSEPNAFQQGISRVSWLLIRFMLVMAPVVLLINGYT-----KGDWWEAALFALSVAVGLTPEMLPMIVTST 344 (902)
T ss_pred HHHHHhhccCCCCCcHHHHHHHHHHHHHHHHHHHHHHhhhHHHHh-----cCCHHHHHHHHHHHHHHHcccHHHHHHHHH
Confidence 999999887777777766555443333 33332222221111 124556778889999999999999999999
Q ss_pred HHHHHHHHHhcCceecCCCCcCcCCceeEEEecccCcccCCceEEEEEEecCCCccccCCCCCcHHHHHHHHhccceEee
Q 003952 458 VNTSLIALARRGIFCTEPFRIPFAGKVDMCCFDKTGTLTSDDMEFRGVVGLSNAELEDDMTKVPVRTQEILASCHALVFV 537 (784)
Q Consensus 458 v~~s~~~l~k~~I~~~~~~~ie~lG~vd~icfDKTGTLT~~~m~v~~i~~~~~~~~~~~~~~~~~~~~~~la~chsl~~~ 537 (784)
++.+..+|+|+|++++++.++|.+|++|++|||||||||+|+|+|..+....+. ...+.....+.|... .
T Consensus 345 la~g~~~mak~~ilVk~l~aiE~lg~v~vic~DKTGTLT~n~m~V~~~~~~~~~--------~~~~ll~~a~l~~~~--~ 414 (902)
T PRK10517 345 LARGAVKLSKQKVIVKRLDAIQNFGAMDILCTDKTGTLTQDKIVLENHTDISGK--------TSERVLHSAWLNSHY--Q 414 (902)
T ss_pred HHHHHHHHHhCCcEEecchhhhhccCCCEEEecCCCccccceEEEEEEecCCCC--------CHHHHHHHHHhcCCc--C
Confidence 999999999999999999999999999999999999999999999987533221 011222222222211 1
Q ss_pred CCcccCCHHHHHHHhccCccccCCCccccCCCCCcceeEEEEEccCCCCCeeEEEEEEC-CEEEEEEeCchHHHHHhhcc
Q 003952 538 DNKLVGDPLEKAALKGIDWSYKSDEKAMPKRGGGNAVQIVQRHHFASHLKRMSVVVRVQ-EEFFAFVKGAPETIQDRLTD 616 (784)
Q Consensus 538 ~~~~~gdple~All~~~~~~~~~~~~~~~~~~~~~~~~il~~~~Fss~~krmsviv~~~-~~~~~~~KGapE~I~~~~~~ 616 (784)
...|||+|.|+++++.... .. .....++.++.+||+|++|||+++++.. +.+.+++|||||.|.++|..
T Consensus 415 --~~~~~p~d~All~~a~~~~-----~~---~~~~~~~~~~~~pFds~~k~msvvv~~~~~~~~~~~KGa~e~il~~c~~ 484 (902)
T PRK10517 415 --TGLKNLLDTAVLEGVDEES-----AR---SLASRWQKIDEIPFDFERRRMSVVVAENTEHHQLICKGALEEILNVCSQ 484 (902)
T ss_pred --CCCCCHHHHHHHHHHHhcc-----hh---hhhhcCceEEEeeeCCCcceEEEEEEECCCeEEEEEeCchHHHHHhchh
Confidence 2269999999998864211 00 0113466788999999999999998754 45789999999999999953
Q ss_pred C-------------chhHHHHHHHHhhccCeEEEEEEEeCCCCChhhHhhhhhhhccCCcEEEEEEeecCCCCcchHHHH
Q 003952 617 L-------------PSSYIETYKKYTHQGSRVLALAFKSLPDMTVSDARSLHRDEVENGLTFAGFAVFNCPIREDSAKIL 683 (784)
Q Consensus 617 ~-------------p~~~~~~~~~~~~~G~Rvlala~k~l~~~~~~~~~~~~r~~~E~~l~flG~l~~~d~lr~da~~~I 683 (784)
. .+++.+..++++++|+||+++|||+++.... ...+ ..|+|++|+|+++|+||+|||++++|
T Consensus 485 ~~~~~~~~~l~~~~~~~i~~~~~~~a~~G~rvlavA~k~~~~~~~----~~~~-~~e~~l~~lGli~~~Dp~R~~a~~aI 559 (902)
T PRK10517 485 VRHNGEIVPLDDIMLRRIKRVTDTLNRQGLRVVAVATKYLPAREG----DYQR-ADESDLILEGYIAFLDPPKETTAPAL 559 (902)
T ss_pred hhcCCCeecCCHHHHHHHHHHHHHHHhcCCEEEEEEEecCCcccc----cccc-ccccCceeeehHhhhCcchhhHHHHH
Confidence 2 1235566788999999999999998864321 1111 23789999999999999999999999
Q ss_pred HHHhhCCCcEEEEcCCCHHHHHHHHHHcccccCCcEEEecC-C--CC----------CeeEEeCCCcccccccchhhhhc
Q 003952 684 SELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLILCPV-K--NG----------KVYEWVSPDETEKIQYSEKEVEG 750 (784)
Q Consensus 684 ~~L~~agi~v~MITGDn~~TA~~VA~~~gI~~~~~~il~~~-~--~~----------~~~~~~~~~~~~~~~~~~~~~~~ 750 (784)
++|+++||+|+||||||+.||.+||+++||... ..+.+.+ + +. ..+.-.++++ |.+.++.
T Consensus 560 ~~l~~aGI~v~miTGD~~~tA~~IA~~lGI~~~-~v~~G~el~~l~~~el~~~~~~~~VfAr~sPe~------K~~IV~~ 632 (902)
T PRK10517 560 KALKASGVTVKILTGDSELVAAKVCHEVGLDAG-EVLIGSDIETLSDDELANLAERTTLFARLTPMH------KERIVTL 632 (902)
T ss_pred HHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCcc-CceeHHHHHhCCHHHHHHHHhhCcEEEEcCHHH------HHHHHHH
Confidence 999999999999999999999999999999522 1221111 0 00 0011111111 3345667
Q ss_pred cCCCee-EEEechhHHHH
Q 003952 751 LTDAHD-LCIGGDCFEML 767 (784)
Q Consensus 751 l~~~~~-l~~tGd~l~~l 767 (784)
++++++ ++|+|||+|+.
T Consensus 633 Lq~~G~vVam~GDGvNDa 650 (902)
T PRK10517 633 LKREGHVVGFMGDGINDA 650 (902)
T ss_pred HHHCCCEEEEECCCcchH
Confidence 776655 89999999986
No 8
>TIGR01524 ATPase-IIIB_Mg magnesium-translocating P-type ATPase. The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis.
Probab=100.00 E-value=8.1e-81 Score=751.73 Aligned_cols=555 Identities=21% Similarity=0.240 Sum_probs=421.6
Q ss_pred CchhhhhhhhcCCCCCHHHHHHHHhcCCCCccCCCCc-cHHHHHHHHhhhhHHHHHHHhhhhcccchhhhhHHHHHHHHH
Q 003952 152 TKETFGYYLKCTGHSTEAKIAVATEKWGRNVFEYPQP-TFQKLMKENCMEPFFVFQVFCVGLWCLDEYWYYSLFTLFMLF 230 (784)
Q Consensus 152 ~~~~~~~~~~~~g~l~~~~v~~~~~~yG~N~~~~~~~-s~~~ll~~~~~~pf~vfqi~~~~lw~l~~y~~~~~~~l~~l~ 230 (784)
.++.++.+.++..|||++|+++|+++||+|+++.+++ +++++|++++.+||.++++++.+++++.+.|+.+++++++++
T Consensus 20 ~~~~~~~l~~~~~GLs~~ev~~r~~~~G~N~l~~~~~~~~~~~~~~~~~~p~~~iL~~~a~ls~~~~~~~~~~iI~~iv~ 99 (867)
T TIGR01524 20 KETLLRKLGVHETGLTNVEVTERLAEFGPNQTVEEKKVPNLRLLIRAFNNPFIYILAMLMGVSYLTDDLEATVIIALMVL 99 (867)
T ss_pred HHHHHHHhCCCCCCCCHHHHHHHHHhcCCCcCCCCCCCCHHHHHHHHHhhHHHHHHHHHHHHHHHHhhHHHHHHhhhHHH
Confidence 3455666666556789999999999999999998864 799999999999999999998888888778888888877777
Q ss_pred HHHHHHHHHHHHHHHHHHhhhh-CCceEEEEE------cCeEEEeecCCCCCCcEEEEcCCCCCCCCCCeecceeeEeeC
Q 003952 231 MFESTMAKSRLKTLTEIRRVRV-DNQTIMVHR------CGKWVKLAGTDLVPGDVVSIGRSSGQTGEDKSVPADMLILGG 303 (784)
Q Consensus 231 ~~~~~~~~~~~~~~~~l~~~~~-~~~~v~V~R------~g~~~~I~s~~LvpGDiV~i~~ge~d~~~~~~vPaD~ill~G 303 (784)
+......+++.|+.+.+..+.. .+..++|+| ||++++|+++||||||+|.+++|+ +|||||+|++|
T Consensus 100 ~~~~i~~~~e~~a~ka~~~L~~l~~~~~~V~R~~~~~~dg~~~~I~~~eLv~GDiV~l~~Gd-------~VPaDg~li~g 172 (867)
T TIGR01524 100 ASGLLGFIQESRAERAAYALKNMVKNTATVLRVINENGNGSMDEVPIDALVPGDLIELAAGD-------IIPADARVISA 172 (867)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhccCeeEEEEecccCCCCeEEEEEhhcCCCCCEEEECCCC-------EEcccEEEEec
Confidence 7766666666555444444333 356799999 999999999999999999999887 99999999999
Q ss_pred e-eEeeccCCCCCCcceeeccccCCCCccccccccCCCeeEEeeeeEeecCCCCCcCCCCCCCceEEEEEeeccccchhH
Q 003952 304 S-AIVNEAILTGESTPQWKVSIMGRETGEKLSARRDKSHVLFGGTKILQHTPDKTFPLKTPDGGCLAVVLRTGFETSQGK 382 (784)
Q Consensus 304 ~-~~VdES~LTGES~Pv~K~~~~~~~~~~~~~~~~~~~~~lf~GT~v~~~~~~~~~~~~~~~g~~~~~V~~TG~~T~~gk 382 (784)
+ +.||||+|||||.|+.|.+.+....+.. ..+++|++|+||.|. +|.+.++|++||.+|..||
T Consensus 173 ~~l~VDES~LTGES~PV~K~~~~~~~~~~~---~~~~~n~vfaGT~v~-------------~G~~~~~V~~tG~~T~~gk 236 (867)
T TIGR01524 173 RDLFINQSALTGESLPVEKFVEDKRARDPE---ILERENLCFMGTNVL-------------SGHAQAVVLATGSSTWFGS 236 (867)
T ss_pred CceEEEcccccCCCCcccccCCcccccccc---ccccccceecCCeEE-------------EeEEEEEEEEEcCccHHHH
Confidence 6 7999999999999999987432211111 124689999999999 8999999999999999999
Q ss_pred HHHHhcccccccccchhHHHHHH----HHHHHHHHHHhhheeecCcCCccchhHHHHHHHHhhhhcccCCcchHHHHHHH
Q 003952 383 LMRTILFSTERVTANSWESGLFI----LFLVVFAVIAAGYVLKKGMEDPTRSKYKLFLSCSLIITSVIPPELPMELSIAV 458 (784)
Q Consensus 383 l~~~i~~~~~~~~~~~~~~~~fi----~~ll~~aii~~~~~~~~~~~~~~~~~~~~~l~~i~ii~~~vP~~Lp~~lslav 458 (784)
+.+.+.. .+..++.++....+. .+.++++++.+.+++.. ..++...++.++.++++++||+||+++++++
T Consensus 237 i~~~v~~-~~~~t~lq~~~~~i~~~~~~~~~~~~~i~~~~~~~~-----~~~~~~~~~~al~l~v~~iP~~Lp~~vt~~l 310 (867)
T TIGR01524 237 LAIAATE-RRGQTAFDKGVKSVSKLLIRFMLVMVPVVLMINGLM-----KGDWLEAFLFALAVAVGLTPEMLPMIVSSNL 310 (867)
T ss_pred HHHHhhC-CCCCCcHHHHHHHHHHHHHHHHHHHHHHheehHHHh-----cCCHHHHHHHHHHHHHHhCcchHHHHHHHHH
Confidence 9999877 444566655544433 33333333322222111 1245567888899999999999999999999
Q ss_pred HHHHHHHHhcCceecCCCCcCcCCceeEEEecccCcccCCceEEEEEEecCCCccccCCCCCcHHHHHHHHhccceEeeC
Q 003952 459 NTSLIALARRGIFCTEPFRIPFAGKVDMCCFDKTGTLTSDDMEFRGVVGLSNAELEDDMTKVPVRTQEILASCHALVFVD 538 (784)
Q Consensus 459 ~~s~~~l~k~~I~~~~~~~ie~lG~vd~icfDKTGTLT~~~m~v~~i~~~~~~~~~~~~~~~~~~~~~~la~chsl~~~~ 538 (784)
+.+..+|+|+|++++++.++|.+|++|++|||||||||+|+|+|.++...++. ..+....++.+++..
T Consensus 311 a~g~~~mak~~ilvk~l~aiE~lg~v~vic~DKTGTLT~~~m~v~~~~~~~~~---------~~~~~l~~a~l~~~~--- 378 (867)
T TIGR01524 311 AKGAINMSKKKVIVKELSAIQNFGAMDILCTDKTGTLTQDKIELEKHIDSSGE---------TSERVLKMAWLNSYF--- 378 (867)
T ss_pred HHHHHHHHhCCcEEccchhhhhccCccEEEecCCCccccCeEEEEEEecCCCC---------CHHHHHHHHHHhCCC---
Confidence 99999999999999999999999999999999999999999999998643321 112222223333221
Q ss_pred CcccCCHHHHHHHhccCccccCCCccccCCCCCcceeEEEEEccCCCCCeeEEEEEECC-EEEEEEeCchHHHHHhhccC
Q 003952 539 NKLVGDPLEKAALKGIDWSYKSDEKAMPKRGGGNAVQIVQRHHFASHLKRMSVVVRVQE-EFFAFVKGAPETIQDRLTDL 617 (784)
Q Consensus 539 ~~~~gdple~All~~~~~~~~~~~~~~~~~~~~~~~~il~~~~Fss~~krmsviv~~~~-~~~~~~KGapE~I~~~~~~~ 617 (784)
.+..+||+|+|+++++.... . ......++.++.+||+|++|||+++++..+ .+++++|||||.+.++|...
T Consensus 379 ~~~~~~p~~~Al~~~~~~~~---~-----~~~~~~~~~~~~~pF~s~~k~ms~~v~~~~~~~~~~~KGa~e~il~~c~~~ 450 (867)
T TIGR01524 379 QTGWKNVLDHAVLAKLDESA---A-----RQTASRWKKVDEIPFDFDRRRLSVVVENRAEVTRLICKGAVEEMLTVCTHK 450 (867)
T ss_pred CCCCCChHHHHHHHHHHhhc---h-----hhHhhcCceEEEeccCCCcCEEEEEEEcCCceEEEEEeCcHHHHHHhchhh
Confidence 12357999999998764210 0 011134667889999999999999987654 47899999999999999532
Q ss_pred -------------chhHHHHHHHHhhccCeEEEEEEEeCCCCChhhHhhhhhhhccCCcEEEEEEeecCCCCcchHHHHH
Q 003952 618 -------------PSSYIETYKKYTHQGSRVLALAFKSLPDMTVSDARSLHRDEVENGLTFAGFAVFNCPIREDSAKILS 684 (784)
Q Consensus 618 -------------p~~~~~~~~~~~~~G~Rvlala~k~l~~~~~~~~~~~~r~~~E~~l~flG~l~~~d~lr~da~~~I~ 684 (784)
.+++.+..+.++++|+||+++|||+++..+. +.. +..|++|+|+|+++|+||+|+|++++|+
T Consensus 451 ~~~~~~~~l~~~~~~~i~~~~~~~a~~G~rvlavA~~~~~~~~~----~~~-~~~e~~l~~lGli~l~Dp~R~~~~~aI~ 525 (867)
T TIGR01524 451 RFGGAVVTLSESEKSELQDMTAEMNRQGIRVIAVATKTLKVGEA----DFT-KTDEEQLIIEGFLGFLDPPKESTKEAIA 525 (867)
T ss_pred hcCCceecCCHHHHHHHHHHHHHHHhcCCEEEEEEEeccCcccc----ccc-ccccCCcEEEEEEEeeCCCchhHHHHHH
Confidence 2356677788999999999999999864321 111 1237899999999999999999999999
Q ss_pred HHhhCCCcEEEEcCCCHHHHHHHHHHcccccCCcEEEecCCC---C----------CeeEEeCCCcccccccchhhhhcc
Q 003952 685 ELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLILCPVKN---G----------KVYEWVSPDETEKIQYSEKEVEGL 751 (784)
Q Consensus 685 ~L~~agi~v~MITGDn~~TA~~VA~~~gI~~~~~~il~~~~~---~----------~~~~~~~~~~~~~~~~~~~~~~~l 751 (784)
+||++||+++||||||+.||.+||+++||.+.. .+.+.+-. . ..+.-.++++ |.+.++.+
T Consensus 526 ~l~~aGI~vvmiTGD~~~tA~aIA~~lGI~~~~-v~~g~~l~~~~~~el~~~~~~~~vfAr~~Pe~------K~~iV~~l 598 (867)
T TIGR01524 526 ALFKNGINVKVLTGDNEIVTARICQEVGIDAND-FLLGADIEELSDEELARELRKYHIFARLTPMQ------KSRIIGLL 598 (867)
T ss_pred HHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCC-eeecHhhhhCCHHHHHHHhhhCeEEEECCHHH------HHHHHHHH
Confidence 999999999999999999999999999996432 22211100 0 0011111111 33446677
Q ss_pred CCCee-EEEechhHHHH
Q 003952 752 TDAHD-LCIGGDCFEML 767 (784)
Q Consensus 752 ~~~~~-l~~tGd~l~~l 767 (784)
+++++ ++|+|||+|+.
T Consensus 599 q~~G~vVam~GDGvNDa 615 (867)
T TIGR01524 599 KKAGHTVGFLGDGINDA 615 (867)
T ss_pred HhCCCEEEEECCCcccH
Confidence 76654 99999999986
No 9
>TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others.
Probab=100.00 E-value=6.7e-81 Score=761.04 Aligned_cols=563 Identities=22% Similarity=0.234 Sum_probs=419.5
Q ss_pred chhhhhhhhc-CCCCC--HHHHHHHHhcCCCCccCCCCc-cHHHHHHHHhhhhHHHHHHHhhhhcccch-----------
Q 003952 153 KETFGYYLKC-TGHST--EAKIAVATEKWGRNVFEYPQP-TFQKLMKENCMEPFFVFQVFCVGLWCLDE----------- 217 (784)
Q Consensus 153 ~~~~~~~~~~-~g~l~--~~~v~~~~~~yG~N~~~~~~~-s~~~ll~~~~~~pf~vfqi~~~~lw~l~~----------- 217 (784)
++.++.+.++ ..||| ++|+++|+++||+|+++.|++ +++++|++++.+|++++++++.+++++-.
T Consensus 45 ~~~~~~l~t~~~~GLs~~~~ev~~r~~~yG~N~l~~~~~~s~~~~~~~~f~~~~~~~l~~~ails~~~~~~~~~~~~~~~ 124 (941)
T TIGR01517 45 EGIATKLKTDLNEGVRLSSSTLERREKVYGKNELPEKPPKSFLQIVWAALSDQTLILLSVAAVVSLVLGLPEPGEGKADT 124 (941)
T ss_pred HHHHHHhCcCcccCCCCCHHHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHhCHHHHHHHHHHHHHHHHhhcccccccCcc
Confidence 3456666555 34678 899999999999999998875 89999999999999888887776665522
Q ss_pred --hhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh--CCceEEEEEcCeEEEeecCCCCCCcEEEEcCCCCCCCCCCe
Q 003952 218 --YWYYSLFTLFMLFMFESTMAKSRLKTLTEIRRVRV--DNQTIMVHRCGKWVKLAGTDLVPGDVVSIGRSSGQTGEDKS 293 (784)
Q Consensus 218 --y~~~~~~~l~~l~~~~~~~~~~~~~~~~~l~~~~~--~~~~v~V~R~g~~~~I~s~~LvpGDiV~i~~ge~d~~~~~~ 293 (784)
.|+.++++++++++...+...+..++.++++++.. .+..++|+|||++++|+++||+|||+|.|++|+ .
T Consensus 125 ~~~~~~~~~il~~v~~~~~i~~~~e~~~~~~~~~l~~~~~~~~~~ViRdG~~~~I~~~~Lv~GDiV~l~~Gd-------~ 197 (941)
T TIGR01517 125 ETGWIEGVAILVSVILVVLVTAVNDYKKELQFRQLNREKSAQKIAVIRGGQEQQISIHDIVVGDIVSLSTGD-------V 197 (941)
T ss_pred ccchHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHhccCCCceEEEECCEEEEEeHHHCCCCCEEEECCCC-------E
Confidence 67778777766665555556666665555555543 366899999999999999999999999999887 9
Q ss_pred ecceeeEeeC-eeEeeccCCCCCCcceeeccccCCCCccccccccCCCeeEEeeeeEeecCCCCCcCCCCCCCceEEEEE
Q 003952 294 VPADMLILGG-SAIVNEAILTGESTPQWKVSIMGRETGEKLSARRDKSHVLFGGTKILQHTPDKTFPLKTPDGGCLAVVL 372 (784)
Q Consensus 294 vPaD~ill~G-~~~VdES~LTGES~Pv~K~~~~~~~~~~~~~~~~~~~~~lf~GT~v~~~~~~~~~~~~~~~g~~~~~V~ 372 (784)
|||||+|++| ++.||||+|||||.|+.|.+ ++.|++|+||.|. +|.+.++|+
T Consensus 198 IPaD~~li~g~~l~VdES~LTGES~pv~K~~--------------~~~n~v~~GT~v~-------------~G~~~~iV~ 250 (941)
T TIGR01517 198 VPADGVFISGLSLEIDESSITGESDPIKKGA--------------PKDSFLLSGTVVN-------------EGSGRMLVT 250 (941)
T ss_pred ecccEEEEEcCcEEEEecccCCCCCcccccC--------------CCCceEEeCCeEE-------------eeEEEEEEE
Confidence 9999999999 79999999999999999985 2357899999999 899999999
Q ss_pred eeccccchhHHHHHhcccccccccchhHH----HHHHHHHHHHHHHHhhhee----ecC-cCC------ccchhHHHHHH
Q 003952 373 RTGFETSQGKLMRTILFSTERVTANSWES----GLFILFLVVFAVIAAGYVL----KKG-MED------PTRSKYKLFLS 437 (784)
Q Consensus 373 ~TG~~T~~gkl~~~i~~~~~~~~~~~~~~----~~fi~~ll~~aii~~~~~~----~~~-~~~------~~~~~~~~~l~ 437 (784)
+||.+|..||+++.+..+++ .++.++.. ..+..+.++++++.++.++ ... ..+ ....+...++.
T Consensus 251 ~tG~~T~~gki~~~~~~~~~-~t~l~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 329 (941)
T TIGR01517 251 AVGVNSFGGKLMMELRAEGE-DTPLQEKLSELAGLIGKFGMGSAVLLFLVLSLRYVFRIIRGDGRDTEEDAQTFLDHFII 329 (941)
T ss_pred EeCCCcHHHHHHHhhccCCC-CCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccccchhhHHHHHHHHH
Confidence 99999999999999877543 34444332 2333332332322222111 110 000 01245667888
Q ss_pred HHhhhhcccCCcchHHHHHHHHHHHHHHHhcCceecCCCCcCcCCceeEEEecccCcccCCceEEEEEEecCCC-ccccC
Q 003952 438 CSLIITSVIPPELPMELSIAVNTSLIALARRGIFCTEPFRIPFAGKVDMCCFDKTGTLTSDDMEFRGVVGLSNA-ELEDD 516 (784)
Q Consensus 438 ~i~ii~~~vP~~Lp~~lslav~~s~~~l~k~~I~~~~~~~ie~lG~vd~icfDKTGTLT~~~m~v~~i~~~~~~-~~~~~ 516 (784)
++.+++++|||+||++++++++.++.+|+|+|++++++..+|.+|++|++|||||||||+|+|+|.+++..++. +....
T Consensus 330 al~llv~~iP~~Lp~~vti~l~~~~~~mak~~ilvk~l~a~E~lg~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~ 409 (941)
T TIGR01517 330 AVTIVVVAVPEGLPLAVTIALAYSMKKMMKDNNLVRHLAACETMGSATAICSDKTGTLTQNVMSVVQGYIGEQRFNVRDV 409 (941)
T ss_pred HHHHHHhhCCCchHHHHHHHHHHHHHHHHhCCCEEechHHhhhccCceEEEEcCcCceeeceEEEEEEEEecceEecCcc
Confidence 89999999999999999999999999999999999999999999999999999999999999999998754321 00000
Q ss_pred CCCCc---HHHHHHHHhccceEe-e-C----CcccCCHHHHHHHhccCccccCCCccccCCCCCcceeEEEEEccCCCCC
Q 003952 517 MTKVP---VRTQEILASCHALVF-V-D----NKLVGDPLEKAALKGIDWSYKSDEKAMPKRGGGNAVQIVQRHHFASHLK 587 (784)
Q Consensus 517 ~~~~~---~~~~~~la~chsl~~-~-~----~~~~gdple~All~~~~~~~~~~~~~~~~~~~~~~~~il~~~~Fss~~k 587 (784)
....+ .+.....+.|++... . + ....|||+|.|+++++.+.-. +.. .....+++++.+||+|++|
T Consensus 410 ~~~~~~~~~~~l~~~~~~~s~~~~~~~~~~~~~~~g~p~e~All~~~~~~~~-~~~-----~~~~~~~~~~~~pF~s~~k 483 (941)
T TIGR01517 410 LRNVPKHVRNILVEGISLNSSSEEVVDRGGKRAFIGSKTECALLGFLLLLGR-DYQ-----EVRAEEKVVKIYPFNSERK 483 (941)
T ss_pred cccCCHHHHHHHHHHHHhCCCCccccCCCCccccCCCccHHHHHHHHHHcCC-CHH-----HHHhhchhccccccCCCCC
Confidence 01111 112223344544432 1 1 146799999999998653210 000 0012356788999999999
Q ss_pred eeEEEEEECC-EEEEEEeCchHHHHHhhccC-------------chhHHHHHHHHhhccCeEEEEEEEeCCCCChhhHhh
Q 003952 588 RMSVVVRVQE-EFFAFVKGAPETIQDRLTDL-------------PSSYIETYKKYTHQGSRVLALAFKSLPDMTVSDARS 653 (784)
Q Consensus 588 rmsviv~~~~-~~~~~~KGapE~I~~~~~~~-------------p~~~~~~~~~~~~~G~Rvlala~k~l~~~~~~~~~~ 653 (784)
||+++++.++ ++++++|||||.|.++|... .+++.+.+++++++|+||+++|||.++..+..
T Consensus 484 ~msvv~~~~~~~~~~~~KGA~e~il~~c~~~~~~~g~~~~~~~~~~~i~~~~~~~a~~G~Rvl~~A~~~~~~~~~~---- 559 (941)
T TIGR01517 484 FMSVVVKHSGGKVREFRKGASEIVLKPCRKRLDSNGEATPISDDKDRCADVIEPLASDALRTICLAYRDFAPEEFP---- 559 (941)
T ss_pred eEEEEEEeCCCcEEEEEECChHHHHHhhhHHhhcCCCcccCcHHHHHHHHHHHHHHhcCCEEEEEEEEecCccccc----
Confidence 9999999764 58899999999999999532 23567788899999999999999998643221
Q ss_pred hhhhhccCCcEEEEEEeecCCCCcchHHHHHHHhhCCCcEEEEcCCCHHHHHHHHHHcccccCCcEEEecCCCC------
Q 003952 654 LHRDEVENGLTFAGFAVFNCPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLILCPVKNG------ 727 (784)
Q Consensus 654 ~~r~~~E~~l~flG~l~~~d~lr~da~~~I~~L~~agi~v~MITGDn~~TA~~VA~~~gI~~~~~~il~~~~~~------ 727 (784)
..+..|+||+|+|+++|+||+|+|++++|+.||++||+++|+||||+.||.+||++|||.+....+++-.+-.
T Consensus 560 -~~~~~e~~l~~lGli~~~Dplr~~~~~aI~~l~~aGI~v~miTGD~~~tA~~iA~~~GI~~~~~~vi~G~~~~~l~~~e 638 (941)
T TIGR01517 560 -RKDYPNGGLTLIGVVGIKDPLRPGVREAVQECQRAGITVRMVTGDNIDTAKAIARNCGILTFGGLAMEGKEFRRLVYEE 638 (941)
T ss_pred -cccccccCcEEEEEeeccCCCchhHHHHHHHHHHCCCEEEEECCCChHHHHHHHHHcCCCCCCceEeeHHHhhhCCHHH
Confidence 1234589999999999999999999999999999999999999999999999999999986554444211000
Q ss_pred --------CeeEEeCCCcccccccchhhhhccCCCe-eEEEechhHHHH
Q 003952 728 --------KVYEWVSPDETEKIQYSEKEVEGLTDAH-DLCIGGDCFEML 767 (784)
Q Consensus 728 --------~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~l~~tGd~l~~l 767 (784)
..+.-.++++ |...++.+++++ .++|+|||.|+.
T Consensus 639 l~~~i~~~~Vfar~sPe~------K~~iV~~lq~~g~vVam~GDGvNDa 681 (941)
T TIGR01517 639 MDPILPKLRVLARSSPLD------KQLLVLMLKDMGEVVAVTGDGTNDA 681 (941)
T ss_pred HHHHhccCeEEEECCHHH------HHHHHHHHHHCCCEEEEECCCCchH
Confidence 0011111111 334456666654 599999999987
No 10
>PRK15122 magnesium-transporting ATPase; Provisional
Probab=100.00 E-value=4.4e-80 Score=746.08 Aligned_cols=564 Identities=21% Similarity=0.278 Sum_probs=415.7
Q ss_pred CCchhhhhhhhcCCCCCHHHHHHHHhcCCCCccCCCC-ccHHHHHHHHhhhhHHHHHHHhhhhcccchhh----------
Q 003952 151 PTKETFGYYLKCTGHSTEAKIAVATEKWGRNVFEYPQ-PTFQKLMKENCMEPFFVFQVFCVGLWCLDEYW---------- 219 (784)
Q Consensus 151 ~~~~~~~~~~~~~g~l~~~~v~~~~~~yG~N~~~~~~-~s~~~ll~~~~~~pf~vfqi~~~~lw~l~~y~---------- 219 (784)
+.++.++++.++..|||++|+++|+++||+|+++.++ +++|.+|++++.+||.++++++.+++++.++|
T Consensus 31 ~~~~v~~~l~~~~~GLs~~ea~~rl~~~G~N~l~~~~~~~~~~~~l~~f~~~~~~iL~~aa~ls~~~~~~~~~~~~~~~~ 110 (903)
T PRK15122 31 SLEETLANLNTHRQGLTEEDAAERLQRYGPNEVAHEKPPHALVQLLQAFNNPFIYVLMVLAAISFFTDYWLPLRRGEETD 110 (903)
T ss_pred CHHHHHHHhCCCCCCCCHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhhccCCcccc
Confidence 3456677777766688999999999999999999876 57999999999999999888888887765433
Q ss_pred -hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh-CCceEEEEEc------CeEEEeecCCCCCCcEEEEcCCCCCCCCC
Q 003952 220 -YYSLFTLFMLFMFESTMAKSRLKTLTEIRRVRV-DNQTIMVHRC------GKWVKLAGTDLVPGDVVSIGRSSGQTGED 291 (784)
Q Consensus 220 -~~~~~~l~~l~~~~~~~~~~~~~~~~~l~~~~~-~~~~v~V~R~------g~~~~I~s~~LvpGDiV~i~~ge~d~~~~ 291 (784)
..++++++++++......+|.+++.+.++++.. .+.+++|+|| |++++|+++||+|||+|.|++|+
T Consensus 111 ~~~~~iI~~~v~l~~~i~~~qe~~a~~a~~~L~~l~~~~~~V~Rdg~~~~~g~~~~I~~~eLv~GDiV~l~~Gd------ 184 (903)
T PRK15122 111 LTGVIIILTMVLLSGLLRFWQEFRSNKAAEALKAMVRTTATVLRRGHAGAEPVRREIPMRELVPGDIVHLSAGD------ 184 (903)
T ss_pred HhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEECCccCCCCeEEEEEHHHCCCCCEEEECCCC------
Confidence 345555555555555666666666555544443 3678999999 48999999999999999999887
Q ss_pred CeecceeeEeeCe-eEeeccCCCCCCcceeeccccCC--------CCccccccccCCCeeEEeeeeEeecCCCCCcCCCC
Q 003952 292 KSVPADMLILGGS-AIVNEAILTGESTPQWKVSIMGR--------ETGEKLSARRDKSHVLFGGTKILQHTPDKTFPLKT 362 (784)
Q Consensus 292 ~~vPaD~ill~G~-~~VdES~LTGES~Pv~K~~~~~~--------~~~~~~~~~~~~~~~lf~GT~v~~~~~~~~~~~~~ 362 (784)
+|||||+|++|+ +.||||+|||||.|+.|.+.+.. ..++.. .-.+++|++|+||.|.
T Consensus 185 -~IPaDg~li~g~~l~VDES~LTGES~PV~K~~~~~~~~~~~~~~~~~~~~-~~~~~~n~vfaGT~V~------------ 250 (903)
T PRK15122 185 -MIPADVRLIESRDLFISQAVLTGEALPVEKYDTLGAVAGKSADALADDEG-SLLDLPNICFMGTNVV------------ 250 (903)
T ss_pred -EEeeeEEEEEcCceEEEccccCCCCcceeeeccccccccccccccccccC-CcccccceEEeCCEEE------------
Confidence 999999999996 69999999999999999863110 000111 1125689999999999
Q ss_pred CCCceEEEEEeeccccchhHHHHHhcccccccccchhHHHHHHHHHHHHHHHHhhheeecC-cCCccchhHHHHHHHHhh
Q 003952 363 PDGGCLAVVLRTGFETSQGKLMRTILFSTERVTANSWESGLFILFLVVFAVIAAGYVLKKG-MEDPTRSKYKLFLSCSLI 441 (784)
Q Consensus 363 ~~g~~~~~V~~TG~~T~~gkl~~~i~~~~~~~~~~~~~~~~fi~~ll~~aii~~~~~~~~~-~~~~~~~~~~~~l~~i~i 441 (784)
+|.+.++|++||.+|..|++.+.+.. ++..++.++....+...+..++++.+..++..+ +. ..++...++.++.+
T Consensus 251 -~G~~~~~V~atG~~T~~gkI~~~v~~-~~~~t~l~~~l~~i~~~l~~~~~~~~~~v~~~~~~~--~~~~~~~l~~aisl 326 (903)
T PRK15122 251 -SGTATAVVVATGSRTYFGSLAKSIVG-TRAQTAFDRGVNSVSWLLIRFMLVMVPVVLLINGFT--KGDWLEALLFALAV 326 (903)
T ss_pred -eeeEEEEEEEeccccHhhHHHHHhcC-CCCCCcHHHHHHHHHHHHHHHHHHHHHHhhhhhhhc--cCCHHHHHHHHHHH
Confidence 89999999999999999999999876 334455554333332222222221111111111 11 12456677888999
Q ss_pred hhcccCCcchHHHHHHHHHHHHHHHhcCceecCCCCcCcCCceeEEEecccCcccCCceEEEEEEecCCCccccCCCCCc
Q 003952 442 ITSVIPPELPMELSIAVNTSLIALARRGIFCTEPFRIPFAGKVDMCCFDKTGTLTSDDMEFRGVVGLSNAELEDDMTKVP 521 (784)
Q Consensus 442 i~~~vP~~Lp~~lslav~~s~~~l~k~~I~~~~~~~ie~lG~vd~icfDKTGTLT~~~m~v~~i~~~~~~~~~~~~~~~~ 521 (784)
+++++||+||++++++++.+..+|+|+|+++|++..+|.+|++|++|||||||||+|+|+|.+++..++.. .
T Consensus 327 ~V~~~Pe~Lp~~vt~~La~g~~~mak~~ilVk~l~avE~Lg~v~vIc~DKTGTLT~~~m~V~~~~~~~~~~--------~ 398 (903)
T PRK15122 327 AVGLTPEMLPMIVSSNLAKGAIAMARRKVVVKRLNAIQNFGAMDVLCTDKTGTLTQDRIILEHHLDVSGRK--------D 398 (903)
T ss_pred HHHHccchHHHHHHHHHHHHHHHHHHcCCeecccchhhhhcCCcEEEecCCcccccCeEEEEEEEcCCCCC--------h
Confidence 99999999999999999999999999999999999999999999999999999999999999987543310 1
Q ss_pred HHHHHHHHhccceEeeCCcccCCHHHHHHHhccCccccCCCccccCCCCCcceeEEEEEccCCCCCeeEEEEEE-CCEEE
Q 003952 522 VRTQEILASCHALVFVDNKLVGDPLEKAALKGIDWSYKSDEKAMPKRGGGNAVQIVQRHHFASHLKRMSVVVRV-QEEFF 600 (784)
Q Consensus 522 ~~~~~~la~chsl~~~~~~~~gdple~All~~~~~~~~~~~~~~~~~~~~~~~~il~~~~Fss~~krmsviv~~-~~~~~ 600 (784)
.+... ++.+++.. ...+|||+|+|+++++...-. . .....++.++.+||+|.+|||+++++. +++++
T Consensus 399 ~~~l~-~a~l~s~~---~~~~~~p~e~All~~a~~~~~---~-----~~~~~~~~~~~~pF~s~~k~ms~v~~~~~~~~~ 466 (903)
T PRK15122 399 ERVLQ-LAWLNSFH---QSGMKNLMDQAVVAFAEGNPE---I-----VKPAGYRKVDELPFDFVRRRLSVVVEDAQGQHL 466 (903)
T ss_pred HHHHH-HHHHhCCC---CCCCCChHHHHHHHHHHHcCc---h-----hhhhcCceEEEeeeCCCcCEEEEEEEcCCCcEE
Confidence 12222 22222211 123689999999998753210 0 011246678899999999999999986 45788
Q ss_pred EEEeCchHHHHHhhccC---------c----hhHHHHHHHHhhccCeEEEEEEEeCCCCChhhHhhhhhhhccCCcEEEE
Q 003952 601 AFVKGAPETIQDRLTDL---------P----SSYIETYKKYTHQGSRVLALAFKSLPDMTVSDARSLHRDEVENGLTFAG 667 (784)
Q Consensus 601 ~~~KGapE~I~~~~~~~---------p----~~~~~~~~~~~~~G~Rvlala~k~l~~~~~~~~~~~~r~~~E~~l~flG 667 (784)
+++|||||.|.++|... + +.+.+..+.++++|+||+++|||.++..... ...++..|+|++|+|
T Consensus 467 ~~~KGa~e~il~~c~~~~~~~~~~~l~~~~~~~i~~~~~~~a~~G~rvlavA~k~~~~~~~~---~~~~~~~e~~l~~lG 543 (903)
T PRK15122 467 LICKGAVEEMLAVATHVRDGDTVRPLDEARRERLLALAEAYNADGFRVLLVATREIPGGESR---AQYSTADERDLVIRG 543 (903)
T ss_pred EEECCcHHHHHHhchhhhcCCCeecCCHHHHHHHHHHHHHHHhCCCEEEEEEEeccCccccc---cccccccccCcEEEE
Confidence 99999999999999532 2 2355667889999999999999988643211 112345688999999
Q ss_pred EEeecCCCCcchHHHHHHHhhCCCcEEEEcCCCHHHHHHHHHHcccccCCcEEEecCCCCCeeEEeCCCccc--------
Q 003952 668 FAVFNCPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLILCPVKNGKVYEWVSPDETE-------- 739 (784)
Q Consensus 668 ~l~~~d~lr~da~~~I~~L~~agi~v~MITGDn~~TA~~VA~~~gI~~~~~~il~~~~~~~~~~~~~~~~~~-------- 739 (784)
+++|+||+|||++++|++||++||+|+||||||+.||.+||+++||... ..+.+. .++-.+.++..
T Consensus 544 li~l~Dp~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~aIA~~lGI~~~-~vi~G~-----el~~~~~~el~~~v~~~~V 617 (903)
T PRK15122 544 FLTFLDPPKESAAPAIAALRENGVAVKVLTGDNPIVTAKICREVGLEPG-EPLLGT-----EIEAMDDAALAREVEERTV 617 (903)
T ss_pred EEeccCccHHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCC-CccchH-----hhhhCCHHHHHHHhhhCCE
Confidence 9999999999999999999999999999999999999999999999632 122111 11100000000
Q ss_pred ---cccc-chhhhhccCCCee-EEEechhHHHH
Q 003952 740 ---KIQY-SEKEVEGLTDAHD-LCIGGDCFEML 767 (784)
Q Consensus 740 ---~~~~-~~~~~~~l~~~~~-l~~tGd~l~~l 767 (784)
..|. |.+.++.++++++ ++|+|||+|+.
T Consensus 618 fAr~sPe~K~~iV~~Lq~~G~vVamtGDGvNDa 650 (903)
T PRK15122 618 FAKLTPLQKSRVLKALQANGHTVGFLGDGINDA 650 (903)
T ss_pred EEEeCHHHHHHHHHHHHhCCCEEEEECCCchhH
Confidence 0011 3345667776665 99999999986
No 11
>TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116.
Probab=100.00 E-value=3.3e-80 Score=750.61 Aligned_cols=517 Identities=20% Similarity=0.229 Sum_probs=409.1
Q ss_pred CCchhhhhhhhcC-CCCC-HHHHHHHHhcCCCCccCCCC-ccHHHHHHHHh-hhhHHHHHHHhhhhcccchhhhhHHHHH
Q 003952 151 PTKETFGYYLKCT-GHST-EAKIAVATEKWGRNVFEYPQ-PTFQKLMKENC-MEPFFVFQVFCVGLWCLDEYWYYSLFTL 226 (784)
Q Consensus 151 ~~~~~~~~~~~~~-g~l~-~~~v~~~~~~yG~N~~~~~~-~s~~~ll~~~~-~~pf~vfqi~~~~lw~l~~y~~~~~~~l 226 (784)
+.++.++.+.++. .||| ++|+++|+++||+|+++.|. ++++.+|++++ .+||+++++++.+++++-+.|..+++++
T Consensus 8 ~~~~v~~~l~t~~~~GLs~~~ev~~r~~~~G~N~i~~~~~~s~~~~~l~~~~~~~~~~~L~~aa~ls~~~g~~~~~~~i~ 87 (884)
T TIGR01522 8 SVEETCSKLQTDLQNGLNSSQEASHRRAFHGWNEFDVEEDESLWKKFLSQFVKNPLILLLIASAVISVFMGNIDDAVSIT 87 (884)
T ss_pred CHHHHHHHhCcCcccCCCcHHHHHHHHHhcCCCcCCCCCCCCHHHHHHHHHhhChHHHHHHHHHHHHHHHcchhhHHHHH
Confidence 3556677776653 4667 88999999999999999886 68999999999 8999999999988877766677777766
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhh-CCceEEEEEcCeEEEeecCCCCCCcEEEEcCCCCCCCCCCeecceeeEeeCe-
Q 003952 227 FMLFMFESTMAKSRLKTLTEIRRVRV-DNQTIMVHRCGKWVKLAGTDLVPGDVVSIGRSSGQTGEDKSVPADMLILGGS- 304 (784)
Q Consensus 227 ~~l~~~~~~~~~~~~~~~~~l~~~~~-~~~~v~V~R~g~~~~I~s~~LvpGDiV~i~~ge~d~~~~~~vPaD~ill~G~- 304 (784)
+++++......++.+++.+.++++.. .|.+++|+|||++++|+++||||||+|.+++|+ +|||||+|++|+
T Consensus 88 ~~i~~~~~i~~~qe~~a~~~l~~L~~l~~~~~~ViRdg~~~~I~~~eLv~GDiv~l~~Gd-------~IPaDg~ii~g~~ 160 (884)
T TIGR01522 88 LAILIVVTVGFVQEYRSEKSLEALNKLVPPECHLIREGKLEHVLASTLVPGDLVCLSVGD-------RVPADLRIVEAVD 160 (884)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhccCCCeeEEEECCEEEEEEHHHCccCCEEEecCCC-------EEeeeEEEEEcCc
Confidence 66665555666677677677766655 577899999999999999999999999999887 999999999995
Q ss_pred eEeeccCCCCCCcceeeccccCCCCccccccccCCCeeEEeeeeEeecCCCCCcCCCCCCCceEEEEEeeccccchhHHH
Q 003952 305 AIVNEAILTGESTPQWKVSIMGRETGEKLSARRDKSHVLFGGTKILQHTPDKTFPLKTPDGGCLAVVLRTGFETSQGKLM 384 (784)
Q Consensus 305 ~~VdES~LTGES~Pv~K~~~~~~~~~~~~~~~~~~~~~lf~GT~v~~~~~~~~~~~~~~~g~~~~~V~~TG~~T~~gkl~ 384 (784)
+.||||+|||||.|+.|.+.+..... .....+++|++|+||.|. +|.+.++|++||.+|..|++.
T Consensus 161 l~VDES~LTGES~pv~K~~~~~~~~~--~~~~~~~~n~v~~GT~v~-------------~G~~~~~V~~tG~~T~~gki~ 225 (884)
T TIGR01522 161 LSIDESNLTGETTPVSKVTAPIPAAT--NGDLAERSNIAFMGTLVR-------------CGHGKGIVVGTGSNTEFGAVF 225 (884)
T ss_pred eEEEcccccCCCcceecccccccccc--cccccccCceEEeCCEEE-------------eeeEEEEEEEecCccHHHHHH
Confidence 89999999999999999874321111 011125689999999999 899999999999999999999
Q ss_pred HHhcccccccccchhHHHHHHHHHHH----HHHHHhhheeecCcCCccchhHHHHHHHHhhhhcccCCcchHHHHHHHHH
Q 003952 385 RTILFSTERVTANSWESGLFILFLVV----FAVIAAGYVLKKGMEDPTRSKYKLFLSCSLIITSVIPPELPMELSIAVNT 460 (784)
Q Consensus 385 ~~i~~~~~~~~~~~~~~~~fi~~ll~----~aii~~~~~~~~~~~~~~~~~~~~~l~~i~ii~~~vP~~Lp~~lslav~~ 460 (784)
+.+...++.+++.++....+...+.. ++++.+...|.. +.++...+..++.+++++|||+||++++++++.
T Consensus 226 ~~v~~~~~~kt~lq~~l~~l~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~v~llv~aiP~~Lp~~vt~~l~~ 300 (884)
T TIGR01522 226 KMMQAIEKPKTPLQKSMDLLGKQLSLVSFGVIGVICLVGWFQ-----GKDWLEMFTISVSLAVAAIPEGLPIIVTVTLAL 300 (884)
T ss_pred HHhccCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-----cCCHHHHHHHHHHHHHHHccchHHHHHHHHHHH
Confidence 99987777777766655433322211 111111111222 234566778888999999999999999999999
Q ss_pred HHHHHHhcCceecCCCCcCcCCceeEEEecccCcccCCceEEEEEEecCCCc--c-----ccC------CC------C-C
Q 003952 461 SLIALARRGIFCTEPFRIPFAGKVDMCCFDKTGTLTSDDMEFRGVVGLSNAE--L-----EDD------MT------K-V 520 (784)
Q Consensus 461 s~~~l~k~~I~~~~~~~ie~lG~vd~icfDKTGTLT~~~m~v~~i~~~~~~~--~-----~~~------~~------~-~ 520 (784)
+..+|+|+|++++++..+|.+|++|++|||||||||+|+|+|.+++..++.. . ..+ .. . .
T Consensus 301 ~~~r~ak~~ilvk~~~a~E~Lg~v~~Ic~DKTGTLT~n~m~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 380 (884)
T TIGR01522 301 GVLRMSKKRAIVRKLPSVETLGSVNVICSDKTGTLTKNHMTVTKIWTSDGLHTMLNAVSLNQFGEVIVDGDVLHGFYTVA 380 (884)
T ss_pred HHHHHhhcCCcccchHHHHhccCccEEEecCccccccCeEEEEEEEecCceEeeccCCccCCCCcccccccccccccCHH
Confidence 9999999999999999999999999999999999999999999987543210 0 000 00 0 0
Q ss_pred cHHHHHHHHhccceEee--CCcccCCHHHHHHHhccCccccCCCccccCCCCCcceeEEEEEccCCCCCeeEEEEEE--C
Q 003952 521 PVRTQEILASCHALVFV--DNKLVGDPLEKAALKGIDWSYKSDEKAMPKRGGGNAVQIVQRHHFASHLKRMSVVVRV--Q 596 (784)
Q Consensus 521 ~~~~~~~la~chsl~~~--~~~~~gdple~All~~~~~~~~~~~~~~~~~~~~~~~~il~~~~Fss~~krmsviv~~--~ 596 (784)
..+.....+.||+.... +++..|||+|+|+++++... .-+ .....++.++.+||+|++|||+++++. +
T Consensus 381 ~~~~l~~~~l~~~~~~~~~~~~~~g~p~e~All~~~~~~-~~~-------~~~~~~~~~~~~pF~s~~k~m~v~~~~~~~ 452 (884)
T TIGR01522 381 VSRILEAGNLCNNAKFRNEADTLLGNPTDVALIELLMKF-GLD-------DLRETYIRVAEVPFSSERKWMAVKCVHRQD 452 (884)
T ss_pred HHHHHHHHhhhCCCeecCCCCCcCCChHHHHHHHHHHHc-CcH-------hHHhhCcEEeEeCCCCCCCeEEEEEEEcCC
Confidence 01233455778877543 34678999999999976421 000 011246788999999999999999887 4
Q ss_pred CEEEEEEeCchHHHHHhhcc----------C----chhHHHHHHHHhhccCeEEEEEEEeCCCCChhhHhhhhhhhccCC
Q 003952 597 EEFFAFVKGAPETIQDRLTD----------L----PSSYIETYKKYTHQGSRVLALAFKSLPDMTVSDARSLHRDEVENG 662 (784)
Q Consensus 597 ~~~~~~~KGapE~I~~~~~~----------~----p~~~~~~~~~~~~~G~Rvlala~k~l~~~~~~~~~~~~r~~~E~~ 662 (784)
+++++++|||||.|..+|.. + ++++.+..++++++|+||+++|||.+ +.+
T Consensus 453 ~~~~~~~KGape~il~~c~~~~~~~g~~~~l~~~~~~~i~~~~~~~a~~G~rvl~~A~~~~----------------~~~ 516 (884)
T TIGR01522 453 RSEMCFMKGAYEQVLKYCTYYQKKDGKTLTLTQQQRDVIQEEAAEMASAGLRVIAFASGPE----------------KGQ 516 (884)
T ss_pred CeEEEEEeCChHHHHHhhhhhhhcCCCeeeCCHHHHHHHHHHHHHHHhcCCEEEEEEEEcC----------------CCC
Confidence 57889999999999999942 1 13456677889999999999999875 268
Q ss_pred cEEEEEEeecCCCCcchHHHHHHHhhCCCcEEEEcCCCHHHHHHHHHHcccccCCc
Q 003952 663 LTFAGFAVFNCPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPV 718 (784)
Q Consensus 663 l~flG~l~~~d~lr~da~~~I~~L~~agi~v~MITGDn~~TA~~VA~~~gI~~~~~ 718 (784)
|+|+|+++|+||+|||++++|+.|+++|++++|+||||+.||.++|+++||.+...
T Consensus 517 l~~lGli~l~Dp~r~~~~~~i~~l~~~Gi~v~miTGD~~~tA~~ia~~~Gi~~~~~ 572 (884)
T TIGR01522 517 LTFLGLVGINDPPRPGVKEAVTTLITGGVRIIMITGDSQETAVSIARRLGMPSKTS 572 (884)
T ss_pred eEEEEEEeccCcchhHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCCCC
Confidence 99999999999999999999999999999999999999999999999999985433
No 12
>TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase. This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast.
Probab=100.00 E-value=1e-79 Score=733.39 Aligned_cols=472 Identities=22% Similarity=0.245 Sum_probs=384.9
Q ss_pred CCCHHHHHHHHhcCCCCccCCCCccHHHHHHHHhhhhHHHHHHHhhhhcccchhhhhHHHHHHHHHHHHHHHHHHHHHHH
Q 003952 165 HSTEAKIAVATEKWGRNVFEYPQPTFQKLMKENCMEPFFVFQVFCVGLWCLDEYWYYSLFTLFMLFMFESTMAKSRLKTL 244 (784)
Q Consensus 165 ~l~~~~v~~~~~~yG~N~~~~~~~s~~~ll~~~~~~pf~vfqi~~~~lw~l~~y~~~~~~~l~~l~~~~~~~~~~~~~~~ 244 (784)
|||++|+++|+++||+|+++.+.+++|.+|.+++.+||.+.++++.++.+.-+.|..++++++++++......++++++.
T Consensus 1 GLs~~ea~~r~~~~G~N~~~~~~~~~~~~~~~~~~~~~~~lL~~aa~~s~~~~~~~~~~~i~~~~~i~~~i~~~qe~~a~ 80 (755)
T TIGR01647 1 GLTSAEAKKRLAKYGPNELPEKKVSPLLKFLGFFWNPLSWVMEAAAIIAIALENWVDFVIILGLLLLNATIGFIEENKAG 80 (755)
T ss_pred CcCHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhchHHHHHHHHHHHHHhhcchhhhhhhhhhhHHHHHHHHHHHHHHH
Confidence 57899999999999999999877888999999999999776666555444444556666666666666666677777776
Q ss_pred HHHHhhhh-CCceEEEEEcCeEEEeecCCCCCCcEEEEcCCCCCCCCCCeecceeeEeeCe-eEeeccCCCCCCcceeec
Q 003952 245 TEIRRVRV-DNQTIMVHRCGKWVKLAGTDLVPGDVVSIGRSSGQTGEDKSVPADMLILGGS-AIVNEAILTGESTPQWKV 322 (784)
Q Consensus 245 ~~l~~~~~-~~~~v~V~R~g~~~~I~s~~LvpGDiV~i~~ge~d~~~~~~vPaD~ill~G~-~~VdES~LTGES~Pv~K~ 322 (784)
+.++++.. .+.+++|+|||+|++|+++||+|||+|.+++|+ +|||||+|++|+ +.||||+|||||.|+.|.
T Consensus 81 ~~~~~L~~~~~~~~~V~Rdg~~~~I~~~~Lv~GDiV~l~~Gd-------~IPaDg~vi~g~~~~VDeS~LTGES~PV~K~ 153 (755)
T TIGR01647 81 NAVEALKQSLAPKARVLRDGKWQEIPASELVPGDVVRLKIGD-------IVPADCRLFEGDYIQVDQAALTGESLPVTKK 153 (755)
T ss_pred HHHHHHHhhCCCeEEEEECCEEEEEEhhhCcCCCEEEECCCC-------EEeceEEEEecCceEEEcccccCCccceEec
Confidence 66666654 578899999999999999999999999999887 999999999997 999999999999999998
Q ss_pred cccCCCCccccccccCCCeeEEeeeeEeecCCCCCcCCCCCCCceEEEEEeeccccchhHHHHHhcccccccccchhHHH
Q 003952 323 SIMGRETGEKLSARRDKSHVLFGGTKILQHTPDKTFPLKTPDGGCLAVVLRTGFETSQGKLMRTILFSTERVTANSWESG 402 (784)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~lf~GT~v~~~~~~~~~~~~~~~g~~~~~V~~TG~~T~~gkl~~~i~~~~~~~~~~~~~~~ 402 (784)
+ ++.+|+||.|. +|.+.++|++||.+|..|++.+.+...++++++.++...
T Consensus 154 ~----------------~~~v~aGT~v~-------------~G~~~~~V~~tG~~T~~g~i~~lv~~~~~~~~~lq~~~~ 204 (755)
T TIGR01647 154 T----------------GDIAYSGSTVK-------------QGEAEAVVTATGMNTFFGKAAALVQSTETGSGHLQKILS 204 (755)
T ss_pred c----------------CCeeeccCEEE-------------ccEEEEEEEEcCCccHHHHHHHHhhccCCCCCcHHHHHH
Confidence 5 78999999999 899999999999999999999999877766666655544
Q ss_pred H----HHHHHHHHHHHHhhheeecCcCCccchhHHHHHHHHhhhhcccCCcchHHHHHHHHHHHHHHHhcCceecCCCCc
Q 003952 403 L----FILFLVVFAVIAAGYVLKKGMEDPTRSKYKLFLSCSLIITSVIPPELPMELSIAVNTSLIALARRGIFCTEPFRI 478 (784)
Q Consensus 403 ~----fi~~ll~~aii~~~~~~~~~~~~~~~~~~~~~l~~i~ii~~~vP~~Lp~~lslav~~s~~~l~k~~I~~~~~~~i 478 (784)
. ++.+.++++++.+.+++... ..++...+..++.+++++||++||++++++++.+..+|+|+|+++|++..+
T Consensus 205 ~i~~~~~~~~~~~~~i~~~~~~~~~----~~~~~~~~~~~i~vlv~a~P~~Lp~~~~~~la~g~~r~ak~gilvk~l~al 280 (755)
T TIGR01647 205 KIGLFLIVLIGVLVLIELVVLFFGR----GESFREGLQFALVLLVGGIPIAMPAVLSVTMAVGAAELAKKKAIVTRLTAI 280 (755)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHc----CCCHHHHHHHHHHHHHHhCCcchHHHHHHHHHHHHHHHHhCCeEEcccHHH
Confidence 3 33333333333333322211 234566788889999999999999999999999999999999999999999
Q ss_pred CcCCceeEEEecccCcccCCceEEEEEEecCCCccccCCCCCcHHHHHHHHhccceEeeCCcccCCHHHHHHHhccCccc
Q 003952 479 PFAGKVDMCCFDKTGTLTSDDMEFRGVVGLSNAELEDDMTKVPVRTQEILASCHALVFVDNKLVGDPLEKAALKGIDWSY 558 (784)
Q Consensus 479 e~lG~vd~icfDKTGTLT~~~m~v~~i~~~~~~~~~~~~~~~~~~~~~~la~chsl~~~~~~~~gdple~All~~~~~~~ 558 (784)
|.+|++|++|||||||||+|+|+|.+++..++. . .+.+.....+.|.. +..+||+|+|+++++...
T Consensus 281 E~lg~v~~i~~DKTGTLT~~~~~v~~~~~~~~~-~------~~~~~l~~a~~~~~------~~~~~pi~~Ai~~~~~~~- 346 (755)
T TIGR01647 281 EELAGMDILCSDKTGTLTLNKLSIDEILPFFNG-F------DKDDVLLYAALASR------EEDQDAIDTAVLGSAKDL- 346 (755)
T ss_pred HhccCCcEEEecCCCccccCceEEEEEEecCCC-C------CHHHHHHHHHHhCC------CCCCChHHHHHHHHHHHh-
Confidence 999999999999999999999999998765321 0 01122333333431 235899999999865310
Q ss_pred cCCCccccCCCCCcceeEEEEEccCCCCCeeEEEEEEC--CEEEEEEeCchHHHHHhhcc---CchhHHHHHHHHhhccC
Q 003952 559 KSDEKAMPKRGGGNAVQIVQRHHFASHLKRMSVVVRVQ--EEFFAFVKGAPETIQDRLTD---LPSSYIETYKKYTHQGS 633 (784)
Q Consensus 559 ~~~~~~~~~~~~~~~~~il~~~~Fss~~krmsviv~~~--~~~~~~~KGapE~I~~~~~~---~p~~~~~~~~~~~~~G~ 633 (784)
+ .....+++.+.+||+|.+|+|+++++.. ++.+.++|||||.|.++|.. .++++.+..++++++|+
T Consensus 347 --~-------~~~~~~~~~~~~pf~~~~k~~~~~v~~~~~g~~~~~~kGa~e~il~~c~~~~~~~~~~~~~~~~~~~~G~ 417 (755)
T TIGR01647 347 --K-------EARDGYKVLEFVPFDPVDKRTEATVEDPETGKRFKVTKGAPQVILDLCDNKKEIEEKVEEKVDELASRGY 417 (755)
T ss_pred --H-------HHHhcCceEEEeccCCCCCeEEEEEEeCCCceEEEEEeCChHHHHHhcCCcHHHHHHHHHHHHHHHhCCC
Confidence 0 0012366788999999999999988763 56778999999999999954 45677888899999999
Q ss_pred eEEEEEEEeCCCCChhhHhhhhhhhccCCcEEEEEEeecCCCCcchHHHHHHHhhCCCcEEEEcCCCHHHHHHHHHHccc
Q 003952 634 RVLALAFKSLPDMTVSDARSLHRDEVENGLTFAGFAVFNCPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHI 713 (784)
Q Consensus 634 Rvlala~k~l~~~~~~~~~~~~r~~~E~~l~flG~l~~~d~lr~da~~~I~~L~~agi~v~MITGDn~~TA~~VA~~~gI 713 (784)
||+++|||+ .|++|+|+|+++|+||+|||++++|++||++||+++|+||||+.||.+||+++||
T Consensus 418 rvl~vA~~~----------------~e~~l~~~Gli~l~Dp~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~~IA~~lGI 481 (755)
T TIGR01647 418 RALGVARTD----------------EEGRWHFLGLLPLFDPPRHDTKETIERARHLGVEVKMVTGDHLAIAKETARRLGL 481 (755)
T ss_pred EEEEEEEEc----------------CCCCcEEEEEeeccCCChhhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCC
Confidence 999999973 1478999999999999999999999999999999999999999999999999999
Q ss_pred cc
Q 003952 714 VT 715 (784)
Q Consensus 714 ~~ 715 (784)
.+
T Consensus 482 ~~ 483 (755)
T TIGR01647 482 GT 483 (755)
T ss_pred CC
Confidence 74
No 13
>TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit. Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps.
Probab=100.00 E-value=1.9e-79 Score=750.26 Aligned_cols=528 Identities=21% Similarity=0.250 Sum_probs=407.5
Q ss_pred Cchhhhhhhhc-CCCCCHHHHHHHHhcCCCCccCCCC-ccHHHHHHHHhhhhHHHHHHHhhhh-cccc------------
Q 003952 152 TKETFGYYLKC-TGHSTEAKIAVATEKWGRNVFEYPQ-PTFQKLMKENCMEPFFVFQVFCVGL-WCLD------------ 216 (784)
Q Consensus 152 ~~~~~~~~~~~-~g~l~~~~v~~~~~~yG~N~~~~~~-~s~~~ll~~~~~~pf~vfqi~~~~l-w~l~------------ 216 (784)
.++.++.+.++ ..|||++|+++|+++||+|+++.++ .++|.+|.+++++||.+.++++.++ +++.
T Consensus 22 ~~~~~~~l~t~~~~GLs~~e~~~rl~~~G~N~l~~~~~~~~~~~~l~~~~~~~~~iL~~aa~l~~~~~~~~~~~~~~~~~ 101 (997)
T TIGR01106 22 LDELERKYGTDLSKGLSAARAAEILARDGPNALTPPPTTPEWVKFCRQLFGGFSMLLWIGAILCFLAYGIQASTEEEPQN 101 (997)
T ss_pred HHHHHHHhCcCcccCCCHHHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHhcchHHHHHHHHHHHHHHHHHhhccCCCccc
Confidence 44556666655 3477899999999999999998875 4799999999999998887777665 3321
Q ss_pred hhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh-CCceEEEEEcCeEEEeecCCCCCCcEEEEcCCCCCCCCCCeec
Q 003952 217 EYWYYSLFTLFMLFMFESTMAKSRLKTLTEIRRVRV-DNQTIMVHRCGKWVKLAGTDLVPGDVVSIGRSSGQTGEDKSVP 295 (784)
Q Consensus 217 ~y~~~~~~~l~~l~~~~~~~~~~~~~~~~~l~~~~~-~~~~v~V~R~g~~~~I~s~~LvpGDiV~i~~ge~d~~~~~~vP 295 (784)
++|+.++++++++++......++..|+.+.++++.. .+..++|+|||++++|+++||||||+|.|++|+ .||
T Consensus 102 ~~~~~~~~i~~vv~i~~~i~~~qe~ka~~~l~~l~~~~~~~~~ViRdg~~~~I~~~~lv~GDiv~l~~Gd-------~IP 174 (997)
T TIGR01106 102 DNLYLGVVLSAVVIITGCFSYYQEAKSSKIMESFKNMVPQQALVIRDGEKMSINAEQVVVGDLVEVKGGD-------RIP 174 (997)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCeeEEEECCEEEEeeHHHCCCCCEEEECCCC-------EEe
Confidence 356777776666666666667777777777766655 477899999999999999999999999999887 999
Q ss_pred ceeeEeeCe-eEeeccCCCCCCcceeeccccCCCCccccccccCCCeeEEeeeeEeecCCCCCcCCCCCCCceEEEEEee
Q 003952 296 ADMLILGGS-AIVNEAILTGESTPQWKVSIMGRETGEKLSARRDKSHVLFGGTKILQHTPDKTFPLKTPDGGCLAVVLRT 374 (784)
Q Consensus 296 aD~ill~G~-~~VdES~LTGES~Pv~K~~~~~~~~~~~~~~~~~~~~~lf~GT~v~~~~~~~~~~~~~~~g~~~~~V~~T 374 (784)
|||+|++|+ +.||||+|||||.|+.|.+... ...++ +..|++|+||.|+ +|.+.++|++|
T Consensus 175 aD~~il~~~~l~VdeS~LTGES~pv~K~~~~~--~~~~~----~~~n~l~~Gt~v~-------------~G~~~~~V~~t 235 (997)
T TIGR01106 175 ADLRIISAQGCKVDNSSLTGESEPQTRSPEFT--HENPL----ETRNIAFFSTNCV-------------EGTARGIVVNT 235 (997)
T ss_pred eeEEEEEccCcEEEccccCCCCCceeccCCCc--ccCcc----ccCCeEEeccEee-------------eeeEEEEEEEc
Confidence 999999996 8999999999999999986321 11122 3578999999999 89999999999
Q ss_pred ccccchhHHHHHhcccccccccchhHHHHHHHHH----HHHHHHHhhheeecCcCCccchhHHHHHHHHhhhhcccCCcc
Q 003952 375 GFETSQGKLMRTILFSTERVTANSWESGLFILFL----VVFAVIAAGYVLKKGMEDPTRSKYKLFLSCSLIITSVIPPEL 450 (784)
Q Consensus 375 G~~T~~gkl~~~i~~~~~~~~~~~~~~~~fi~~l----l~~aii~~~~~~~~~~~~~~~~~~~~~l~~i~ii~~~vP~~L 450 (784)
|.+|..|++.+.+...+.++++.++....+...+ ++++++.+.+++..+ ..+...+..++.++++++|++|
T Consensus 236 G~~T~~g~i~~~~~~~~~~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~i~v~v~~iP~~L 310 (997)
T TIGR01106 236 GDRTVMGRIASLASGLENGKTPIAIEIEHFIHIITGVAVFLGVSFFILSLILG-----YTWLEAVIFLIGIIVANVPEGL 310 (997)
T ss_pred cccchhhHHHhhhhhcccCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-----CCHHHHHHHHHHHHhhcCCccc
Confidence 9999999999988766656666655444443332 222322222222222 2345566777888888999999
Q ss_pred hHHHHHHHHHHHHHHHhcCceecCCCCcCcCCceeEEEecccCcccCCceEEEEEEecCCC----cccc----CCCC---
Q 003952 451 PMELSIAVNTSLIALARRGIFCTEPFRIPFAGKVDMCCFDKTGTLTSDDMEFRGVVGLSNA----ELED----DMTK--- 519 (784)
Q Consensus 451 p~~lslav~~s~~~l~k~~I~~~~~~~ie~lG~vd~icfDKTGTLT~~~m~v~~i~~~~~~----~~~~----~~~~--- 519 (784)
|+++++++..+..+|+++|++++++.++|.+|++|++|||||||||+|+|+|.+++..+.. .... ....
T Consensus 311 ~~~v~i~l~~~~~~m~~~~ilvk~~~aiE~lg~v~~ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 390 (997)
T TIGR01106 311 LATVTVCLTLTAKRMARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHMWFDNQIHEADTTEDQSGVSFDKSSA 390 (997)
T ss_pred hHHHHHHHHHHHHHHHHCCcEecCcHHHHHhcCCCEEEECCCCceecCceEEEEEEECCeEEecCCccCCCCccCCcccH
Confidence 9999999999999999999999999999999999999999999999999999998743211 0000 0000
Q ss_pred CcHHHHHHHHhccceEeeCC---------cccCCHHHHHHHhccCccccCCCccccCCCCCcceeEEEEEccCCCCCeeE
Q 003952 520 VPVRTQEILASCHALVFVDN---------KLVGDPLEKAALKGIDWSYKSDEKAMPKRGGGNAVQIVQRHHFASHLKRMS 590 (784)
Q Consensus 520 ~~~~~~~~la~chsl~~~~~---------~~~gdple~All~~~~~~~~~~~~~~~~~~~~~~~~il~~~~Fss~~krms 590 (784)
.......+++.||+.....+ ...|||+|.|+++++.+..... ......+++++.+||+|++|||+
T Consensus 391 ~~~~ll~~~alcn~~~~~~~~~~~~~~~~~~~gdp~E~ALl~~a~~~~~~~------~~~~~~~~~v~~~pF~s~rK~m~ 464 (997)
T TIGR01106 391 TWLALSRIAGLCNRAVFKAGQENVPILKRAVAGDASESALLKCIELCLGSV------MEMRERNPKVVEIPFNSTNKYQL 464 (997)
T ss_pred HHHHHHHHHHHcCCCeeccccCCCcccccccCcChHHHHHHHHHHHhCCCH------HHHHhhCceeEEeccCCCCceEE
Confidence 01134567788987664322 3579999999999875432111 01123567889999999999999
Q ss_pred EEEEEC----CEEEEEEeCchHHHHHhhccC-------------chhHHHHHHHHhhccCeEEEEEEEeCCCCChhhHhh
Q 003952 591 VVVRVQ----EEFFAFVKGAPETIQDRLTDL-------------PSSYIETYKKYTHQGSRVLALAFKSLPDMTVSDARS 653 (784)
Q Consensus 591 viv~~~----~~~~~~~KGapE~I~~~~~~~-------------p~~~~~~~~~~~~~G~Rvlala~k~l~~~~~~~~~~ 653 (784)
+++... +++++++|||||.|.++|..+ ++.+.+.+++|+++|+||+|+|||.++..+..+...
T Consensus 465 ~v~~~~~~~~~~~~~~~KGApe~Il~~c~~~~~~g~~~~l~~~~~~~~~~~~~~~a~~GlRvla~A~k~l~~~~~~~~~~ 544 (997)
T TIGR01106 465 SIHENEDPRDPRHLLVMKGAPERILERCSSILIHGKEQPLDEELKEAFQNAYLELGGLGERVLGFCHLYLPDEQFPEGFQ 544 (997)
T ss_pred EEEeccCCCCceEEEEEeCChHHHHHHhhHHhcCCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEEEeecCccccccccc
Confidence 887642 357899999999999999531 234677788999999999999999986432221111
Q ss_pred hhhh---hccCCcEEEEEEeecCCCCcchHHHHHHHhhCCCcEEEEcCCCHHHHHHHHHHcccccC
Q 003952 654 LHRD---EVENGLTFAGFAVFNCPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTK 716 (784)
Q Consensus 654 ~~r~---~~E~~l~flG~l~~~d~lr~da~~~I~~L~~agi~v~MITGDn~~TA~~VA~~~gI~~~ 716 (784)
.+++ ..|+||+|+|+++++||+|+|++++|++|+++||+++|+|||++.||.++|+++||++.
T Consensus 545 ~~~~~~~~~e~~L~flGli~i~Dplr~~v~~aI~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~ 610 (997)
T TIGR01106 545 FDTDDVNFPTDNLCFVGLISMIDPPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKGVGIISE 610 (997)
T ss_pred ccchhhhccccCcEEEEEEeccCCChHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCC
Confidence 1222 34899999999999999999999999999999999999999999999999999999854
No 14
>KOG0204 consensus Calcium transporting ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.1e-75 Score=652.57 Aligned_cols=555 Identities=21% Similarity=0.279 Sum_probs=407.3
Q ss_pred CHHHHHHHHhcCCCCccCCCC-ccHHHHHHHHhhhhHHHHHHHhhhhccc--------chhhhhHHHHHHHHH---HHHH
Q 003952 167 TEAKIAVATEKWGRNVFEYPQ-PTFQKLMKENCMEPFFVFQVFCVGLWCL--------DEYWYYSLFTLFMLF---MFES 234 (784)
Q Consensus 167 ~~~~v~~~~~~yG~N~~~~~~-~s~~~ll~~~~~~pf~vfqi~~~~lw~l--------~~y~~~~~~~l~~l~---~~~~ 234 (784)
+++|+.+|++.||+|.++.++ ++|+.+.+|.+.+.-.+++.+|.+..+. .+.||.+..+++.++ +..+
T Consensus 121 ~~~el~~Rr~~fG~N~~p~k~~K~Fl~fvweA~qD~TLiIL~vaAvvSl~lgi~~~g~~~GW~eG~aI~~sV~~VV~VtA 200 (1034)
T KOG0204|consen 121 EDDELERRRKIFGSNTYPEKPPKGFLRFVWEALQDVTLIILMVAAVVSLGLGIYTPGIEDGWIEGVAILLSVILVVLVTA 200 (1034)
T ss_pred ChHHHHHHHHhcCCCCCCCCCCccHHHHHHHHhccchHHHHHHHHHHHHhhhhccCCCCcccccchhheeeEEEEEEEee
Confidence 467899999999999999876 5999999999999988877777654321 345777776655332 2223
Q ss_pred HHHHHHHHHHHHHHhhhhCCceEEEEEcCeEEEeecCCCCCCcEEEEcCCCCCCCCCCeecceeeEeeC-eeEeeccCCC
Q 003952 235 TMAKSRLKTLTEIRRVRVDNQTIMVHRCGKWVKLAGTDLVPGDVVSIGRSSGQTGEDKSVPADMLILGG-SAIVNEAILT 313 (784)
Q Consensus 235 ~~~~~~~~~~~~l~~~~~~~~~v~V~R~g~~~~I~s~~LvpGDiV~i~~ge~d~~~~~~vPaD~ill~G-~~~VdES~LT 313 (784)
..-+++.+..+.|.+.. .+..+.|+|||+.++|+..|||+|||+.++-|+ .+||||++++| ++.+|||+||
T Consensus 201 ~nDy~qe~QF~~L~~~k-~~~k~~ViR~G~r~~isI~diVVGDIv~lk~GD-------qvPADGvli~gn~L~iDESSlT 272 (1034)
T KOG0204|consen 201 VNDYRQELQFRKLQKEK-RNIKFQVIRGGRRQQISIYDLVVGDIVQLKIGD-------QVPADGVLIQGNSLKIDESSLT 272 (1034)
T ss_pred cchhHHhhhhhhhhhhh-hceEEEEEECCEEEEEEEeeeeeccEEEeecCC-------ccccceEEEeccceeEeccccc
Confidence 33344444444444322 467899999999999999999999999999776 99999999999 5999999999
Q ss_pred CCCcceeeccccCCCCccccccccCCCeeEEeeeeEeecCCCCCcCCCCCCCceEEEEEeeccccchhHHHHHhcccccc
Q 003952 314 GESTPQWKVSIMGRETGEKLSARRDKSHVLFGGTKILQHTPDKTFPLKTPDGGCLAVVLRTGFETSQGKLMRTILFSTER 393 (784)
Q Consensus 314 GES~Pv~K~~~~~~~~~~~~~~~~~~~~~lf~GT~v~~~~~~~~~~~~~~~g~~~~~V~~TG~~T~~gkl~~~i~~~~~~ 393 (784)
|||.++.|.+ +++.+|++||++. +|.+.++|+.+|.+|..|+++.++....+.
T Consensus 273 GESd~v~k~~--------------~~dPfLlSGTkv~-------------eGsgkMlVTaVGmnt~wG~~m~~l~~~~~e 325 (1034)
T KOG0204|consen 273 GESDHVQKSL--------------DKDPFLLSGTKVM-------------EGSGKMLVTAVGMNTQWGIIMTLLGAGGEE 325 (1034)
T ss_pred CCCcceeccC--------------CCCCeEeecceee-------------cCcceEEEEEeeecchHhhHHHhhhcCCCc
Confidence 9999999975 3578999999999 999999999999999999999999877767
Q ss_pred cccchhHHHHH----HHHHHHHHHHHhh-----heeecCcCCc----------cchhHHHHHHHHhhhhcccCCcchHHH
Q 003952 394 VTANSWESGLF----ILFLVVFAVIAAG-----YVLKKGMEDP----------TRSKYKLFLSCSLIITSVIPPELPMEL 454 (784)
Q Consensus 394 ~~~~~~~~~~f----i~~ll~~aii~~~-----~~~~~~~~~~----------~~~~~~~~l~~i~ii~~~vP~~Lp~~l 454 (784)
.++.|...... ..+-+.+|.+.+. |+.-....+. ...+.+.|..++.+++.+||++||+++
T Consensus 326 ~tpLQ~kL~~lA~~Igk~Gl~~A~~~~~VL~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~f~i~VTilVVAVPEGLPLAV 405 (1034)
T KOG0204|consen 326 ETPLQVKLNGLATQIGKIGLLFAALTFIVLVIRFFIGKTKIEGGTGTTWSDEYIQEFVKFFIIAVTILVVAVPEGLPLAV 405 (1034)
T ss_pred CCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhheeeecCCCCCccccHHHHHHHHHHhhheeEEEEEECCCCccHHH
Confidence 77765433221 1112222222221 2111111110 112334556667888999999999999
Q ss_pred HHHHHHHHHHHHhcCceecCCCCcCcCCceeEEEecccCcccCCceEEEEEEecCCCccccCC--CCCcHHHHHHHH---
Q 003952 455 SIAVNTSLIALARRGIFCTEPFRIPFAGKVDMCCFDKTGTLTSDDMEFRGVVGLSNAELEDDM--TKVPVRTQEILA--- 529 (784)
Q Consensus 455 slav~~s~~~l~k~~I~~~~~~~ie~lG~vd~icfDKTGTLT~~~m~v~~i~~~~~~~~~~~~--~~~~~~~~~~la--- 529 (784)
++++++|+++|.+.+.+++...++|++|..+++|.|||||||.|+|+|...+..+.+.-..+. ..+|.....++-
T Consensus 406 TLsLAys~kkMmkD~~LVRhL~ACETMGsAT~ICsDKTGTLT~N~MtVV~~~~~~~~~k~~~~~~~~l~~~~~~ll~~gI 485 (1034)
T KOG0204|consen 406 TLSLAYSMKKMMKDNNLVRHLDACETMGSATAICSDKTGTLTTNRMTVVQSYIGSEHYKVNSPKSSNLPPSLLDLLLQGI 485 (1034)
T ss_pred HHHHHHHHHHHhcchhHHHHhHHHhhcCCceEEEecCcCceEeeeEEEEeeeeccccccccCcccccCCHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999988766543111111 245554433322
Q ss_pred ---hccceEe-eC----CcccCCHHHHHHHhccCccccCCCccccCCCCCcceeEEEEEccCCCCCeeEEEEEECCEE-E
Q 003952 530 ---SCHALVF-VD----NKLVGDPLEKAALKGIDWSYKSDEKAMPKRGGGNAVQIVQRHHFASHLKRMSVVVRVQEEF-F 600 (784)
Q Consensus 530 ---~chsl~~-~~----~~~~gdple~All~~~~~~~~~~~~~~~~~~~~~~~~il~~~~Fss~~krmsviv~~~~~~-~ 600 (784)
++.++.. .+ .+.+|+|+|+|+|.+... ++.+-.. .+.+.++.+.+||+|.+|||+|+++..+.. |
T Consensus 486 ~~Nt~g~v~~~~~~g~~~~~~GspTE~AlL~f~~~-LG~~~~~-----~R~e~~v~kv~~FNS~kK~~gvvi~~~~~~~y 559 (1034)
T KOG0204|consen 486 AQNTTGSVVKPEKGGEQPEQLGSPTECALLGFGLK-LGMDFQD-----VRPEEKVVKVYPFNSVKKRMGVVIKLPDGGHY 559 (1034)
T ss_pred hhcCCCeEEecCCCCcCccccCCHHHHHHHHHHHH-hCcchHh-----hcchhheeEEeccCcccceeeEEEEcCCCCeE
Confidence 2333332 12 247899999999987532 3322111 124567899999999999999999986643 5
Q ss_pred EEEeCchHHHHHhhccC--------------chhHHHHHHHHhhccCeEEEEEEEeCCCCChhhHhhhh-hhhccCCcEE
Q 003952 601 AFVKGAPETIQDRLTDL--------------PSSYIETYKKYTHQGSRVLALAFKSLPDMTVSDARSLH-RDEVENGLTF 665 (784)
Q Consensus 601 ~~~KGapE~I~~~~~~~--------------p~~~~~~~~~~~~~G~Rvlala~k~l~~~~~~~~~~~~-r~~~E~~l~f 665 (784)
+++|||+|.++++|..+ ...+++.++.|+.+|+|++++|||++.....++ .+++ .+..+.++++
T Consensus 560 ~~~KGAsEiVL~~C~~~~~~~g~~~~~~e~~~~~~~~~Ie~mA~~~LRti~lAy~df~~~~~~~-~~~~~~~~~~~~lt~ 638 (1034)
T KOG0204|consen 560 VHWKGASEIVLKSCEYYIDSNGELVPFNEDDRKSFKDVIEPMASEGLRTICLAYRDFVAGPDEE-PSWDNEELPEGGLTL 638 (1034)
T ss_pred EEEcChHHHHHHhhhheECCCCCEeeCCHHHHHHHHHHHHHHHHhhhheeeEEeeccccCCCCC-CCccccccCCCCeEE
Confidence 99999999999999432 234778899999999999999999965331111 1122 3567899999
Q ss_pred EEEEeecCCCCcchHHHHHHHhhCCCcEEEEcCCCHHHHHHHHHHcccccCCc--EEEecCCCCCeeEEeCCCccccc--
Q 003952 666 AGFAVFNCPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPV--LILCPVKNGKVYEWVSPDETEKI-- 741 (784)
Q Consensus 666 lG~l~~~d~lr~da~~~I~~L~~agi~v~MITGDn~~TA~~VA~~~gI~~~~~--~il~~~~~~~~~~~~~~~~~~~~-- 741 (784)
+|+++++||+|||++++|+.|++|||.|.|+||||..||.+||++|||++... .++ ++..++-.+.++..++
T Consensus 639 laivGIkDPvRPgV~~AV~~Cq~AGItVRMVTGDNI~TAkAIA~eCGILt~~~d~~~l----EG~eFr~~s~ee~~~i~p 714 (1034)
T KOG0204|consen 639 LAIVGIKDPVRPGVPEAVQLCQRAGITVRMVTGDNINTAKAIARECGILTPGGDFLAL----EGKEFRELSQEERDKIWP 714 (1034)
T ss_pred EEEeeccCCCCCCcHHHHHHHHHcCcEEEEEeCCcHHHHHHHHHHcccccCCCcccee----cchhhhhcCHHHHHhhhh
Confidence 99999999999999999999999999999999999999999999999996544 444 2223332222222111
Q ss_pred ---------ccch-hhhhccCCCee-EEEechhHHHH
Q 003952 742 ---------QYSE-KEVEGLTDAHD-LCIGGDCFEML 767 (784)
Q Consensus 742 ---------~~~~-~~~~~l~~~~~-l~~tGd~l~~l 767 (784)
|.+. -.++.+.++.+ +|+||||-|.-
T Consensus 715 kl~VlARSSP~DK~lLVk~L~~~g~VVAVTGDGTNDa 751 (1034)
T KOG0204|consen 715 KLRVLARSSPNDKHLLVKGLIKQGEVVAVTGDGTNDA 751 (1034)
T ss_pred hheeeecCCCchHHHHHHHHHhcCcEEEEecCCCCCc
Confidence 1111 12344445454 88999998764
No 15
>TIGR01116 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1, the latter of which is modelled by TIGR01522.
Probab=100.00 E-value=3.4e-74 Score=699.58 Aligned_cols=501 Identities=23% Similarity=0.297 Sum_probs=378.2
Q ss_pred HHHHhhhhHHHHHHHhhhhcccc----------hhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh-CCceEEEEEc
Q 003952 194 MKENCMEPFFVFQVFCVGLWCLD----------EYWYYSLFTLFMLFMFESTMAKSRLKTLTEIRRVRV-DNQTIMVHRC 262 (784)
Q Consensus 194 l~~~~~~pf~vfqi~~~~lw~l~----------~y~~~~~~~l~~l~~~~~~~~~~~~~~~~~l~~~~~-~~~~v~V~R~ 262 (784)
+.+++.+|+.++++++.++.++- ..|+.++++++++++......++++++.+.++++.. .+.+++|+||
T Consensus 1 ~~~~f~~~~~~iL~~aa~ls~~~~~~~~~~~~~~~~~~~~~Il~vi~~~~~i~~~qe~~a~~~~~~L~~~~~~~~~ViRd 80 (917)
T TIGR01116 1 VLEQFEDLLVRILLLAACVSFVLAWFEEGEETVTAFVEPFVILLILVANAIVGVWQERNAEKAIEALKEYESEHAKVLRD 80 (917)
T ss_pred ChHHHhCHHHHHHHHHHHHHHHHhcccccccccccHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEEEC
Confidence 35789999988887777665443 246677777777777777777777777777776655 5778999999
Q ss_pred CeEEEeecCCCCCCcEEEEcCCCCCCCCCCeecceeeEeeCe-eEeeccCCCCCCcceeeccccCCCCccccccccCCCe
Q 003952 263 GKWVKLAGTDLVPGDVVSIGRSSGQTGEDKSVPADMLILGGS-AIVNEAILTGESTPQWKVSIMGRETGEKLSARRDKSH 341 (784)
Q Consensus 263 g~~~~I~s~~LvpGDiV~i~~ge~d~~~~~~vPaD~ill~G~-~~VdES~LTGES~Pv~K~~~~~~~~~~~~~~~~~~~~ 341 (784)
|++++|+++||||||+|.+++|+ .|||||+|++|+ +.||||+|||||.|+.|.+.+..+.+. ...+++|
T Consensus 81 g~~~~I~~~~Lv~GDiv~l~~Gd-------~IPaD~~ll~~~~l~VdeS~LTGES~pv~K~~~~~~~~~~---~~~~~~n 150 (917)
T TIGR01116 81 GRWSVIKAKDLVPGDIVELAVGD-------KVPADIRVLSLKTLRVDQSILTGESVSVNKHTESVPDERA---VNQDKKN 150 (917)
T ss_pred CEEEEEEHHHCCCCCEEEECCCC-------EeeccEEEEEecceEEEcccccCCCCcccccccccCcccc---Ccccccc
Confidence 99999999999999999999877 999999999985 999999999999999998743211111 1124679
Q ss_pred eEEeeeeEeecCCCCCcCCCCCCCceEEEEEeeccccchhHHHHHhcccccccccchhHHHHHHHH----HHHHHHHHhh
Q 003952 342 VLFGGTKILQHTPDKTFPLKTPDGGCLAVVLRTGFETSQGKLMRTILFSTERVTANSWESGLFILF----LVVFAVIAAG 417 (784)
Q Consensus 342 ~lf~GT~v~~~~~~~~~~~~~~~g~~~~~V~~TG~~T~~gkl~~~i~~~~~~~~~~~~~~~~fi~~----ll~~aii~~~ 417 (784)
++|+||.+. +|.+.++|++||.+|..||+.+.+..++++.++.++....+... .++++++.+.
T Consensus 151 ~l~~GT~v~-------------~G~~~~~V~~tG~~T~~gki~~~~~~~~~~~t~lq~~l~~~~~~l~~~~~~~~~i~~~ 217 (917)
T TIGR01116 151 MLFSGTLVV-------------AGKARGVVVRTGMSTEIGKIRDEMRAAEQEDTPLQKKLDEFGELLSKVIGLICILVWV 217 (917)
T ss_pred eeeeCCEEe-------------cceEEEEEEEeCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999 89999999999999999999999988777777776655443322 2222222222
Q ss_pred heeecCcC-Ccc----chhHHHHHHHHhhhhcccCCcchHHHHHHHHHHHHHHHhcCceecCCCCcCcCCceeEEEeccc
Q 003952 418 YVLKKGME-DPT----RSKYKLFLSCSLIITSVIPPELPMELSIAVNTSLIALARRGIFCTEPFRIPFAGKVDMCCFDKT 492 (784)
Q Consensus 418 ~~~~~~~~-~~~----~~~~~~~l~~i~ii~~~vP~~Lp~~lslav~~s~~~l~k~~I~~~~~~~ie~lG~vd~icfDKT 492 (784)
+.+..... ... ......+..++.+++++||++||++++++.+.+..+|++++++++++..+|.+|++|++|||||
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~v~~iP~~Lp~~vti~l~~~~~~m~~~~ilvk~~~~iE~lg~v~~ic~DKT 297 (917)
T TIGR01116 218 INIGHFNDPALGGGWIQGAIYYFKIAVALAVAAIPEGLPAVITTCLALGTRKMAKKNAIVRKLPSVETLGCTTVICSDKT 297 (917)
T ss_pred HHHHHhccccccchhHHHHHHHHHHHHhhhhhccccccHHHHHHHHHHHHHHHHHCCcEecCcHHHHhccCceEEEecCC
Confidence 11111000 001 1122344456778889999999999999999999999999999999999999999999999999
Q ss_pred CcccCCceEEEEEEecCCC------------ccccCC---C----------CCcHHHHHHHHhccceEeeC----C--cc
Q 003952 493 GTLTSDDMEFRGVVGLSNA------------ELEDDM---T----------KVPVRTQEILASCHALVFVD----N--KL 541 (784)
Q Consensus 493 GTLT~~~m~v~~i~~~~~~------------~~~~~~---~----------~~~~~~~~~la~chsl~~~~----~--~~ 541 (784)
||||+|+|+|.+++..++. ...+.. . ........+++.||+..... + +.
T Consensus 298 GTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~lc~~~~~~~~~~~~~~~~ 377 (917)
T TIGR01116 298 GTLTTNQMSVCKVVALDPSSSSLNEFCVTGTTYAPEGGVIKDDGPVAGGQDAGLEELATIAALCNDSSLDFNERKGVYEK 377 (917)
T ss_pred ccccCCeEEEEEEEecCCcccccceEEecCCccCCCccccccCCcccccchHHHHHHHHHHHhcCCCeeeccccCCceee
Confidence 9999999999998764321 000000 0 00123455678899876432 1 24
Q ss_pred cCCHHHHHHHhccC---ccccCCCcc---ccCCC----CCcceeEEEEEccCCCCCeeEEEEEECCEEEEEEeCchHHHH
Q 003952 542 VGDPLEKAALKGID---WSYKSDEKA---MPKRG----GGNAVQIVQRHHFASHLKRMSVVVRVQEEFFAFVKGAPETIQ 611 (784)
Q Consensus 542 ~gdple~All~~~~---~~~~~~~~~---~~~~~----~~~~~~il~~~~Fss~~krmsviv~~~~~~~~~~KGapE~I~ 611 (784)
.|||+|.|+++++. ......... ....+ ....+++++.+||+|++|||||+++.++++++++|||||.|.
T Consensus 378 ~gdp~E~ALl~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pF~s~rK~msviv~~~~~~~~~~KGApe~il 457 (917)
T TIGR01116 378 VGEATEAALKVLVEKMGLPATKNGVSSKRRPALGCNSVWNDKFKKLATLEFSRDRKSMSVLCKPSTGNKLFVKGAPEGVL 457 (917)
T ss_pred ccChhHHHHHHHHHHcCCCchhcccccccccccchhHHHHhhcceeeecccChhhCeEEEEEeeCCcEEEEEcCChHHHH
Confidence 69999999998753 211111000 00000 123577899999999999999999987888999999999999
Q ss_pred HhhccC--------------chhHHHHHHHHhh-ccCeEEEEEEEeCCCCChh--hHhhhhhhhccCCcEEEEEEeecCC
Q 003952 612 DRLTDL--------------PSSYIETYKKYTH-QGSRVLALAFKSLPDMTVS--DARSLHRDEVENGLTFAGFAVFNCP 674 (784)
Q Consensus 612 ~~~~~~--------------p~~~~~~~~~~~~-~G~Rvlala~k~l~~~~~~--~~~~~~r~~~E~~l~flG~l~~~d~ 674 (784)
++|... .+.+.+..++|++ +|+||+++|||.++..... ......++.+|+||+|+|+++++||
T Consensus 458 ~~c~~~~~~~g~~~~l~~~~~~~i~~~~~~~a~~~GlRvl~~A~k~~~~~~~~~~~~~~~~~~~~e~~l~~lGl~~~~Dp 537 (917)
T TIGR01116 458 ERCTHILNGDGRAVPLTDKMKNTILSVIKEMGTTKALRCLALAFKDIPDPREEDLLSDPANFEAIESDLTFIGVVGMLDP 537 (917)
T ss_pred HhccceecCCCCeeeCCHHHHHHHHHHHHHHHhhcCCeEEEEEEEECCccccccccccchhhhhhcCCcEEEEEeeeeCC
Confidence 999531 1235667889999 9999999999998642211 0111244678999999999999999
Q ss_pred CCcchHHHHHHHhhCCCcEEEEcCCCHHHHHHHHHHcccccCC
Q 003952 675 IREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKP 717 (784)
Q Consensus 675 lr~da~~~I~~L~~agi~v~MITGDn~~TA~~VA~~~gI~~~~ 717 (784)
+|+|++++|+.||++|++++|+|||++.||.++|+++||...+
T Consensus 538 lr~~v~e~I~~l~~aGI~v~miTGD~~~tA~~ia~~~gi~~~~ 580 (917)
T TIGR01116 538 PRPEVADAIEKCRTAGIRVIMITGDNKETAEAICRRIGIFSPD 580 (917)
T ss_pred CchhHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHcCCCCCC
Confidence 9999999999999999999999999999999999999998543
No 16
>TIGR01652 ATPase-Plipid phospholipid-translocating P-type ATPase, flippase. This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes.
Probab=100.00 E-value=2.6e-68 Score=658.06 Aligned_cols=580 Identities=20% Similarity=0.270 Sum_probs=396.7
Q ss_pred CCCCccCCCCccHH----HHHHHHhhhhHHHHHHHhhhhcccch----hhhhHHHHHHHHHHHHH-HHHHHHHHHHHHHH
Q 003952 178 WGRNVFEYPQPTFQ----KLMKENCMEPFFVFQVFCVGLWCLDE----YWYYSLFTLFMLFMFES-TMAKSRLKTLTEIR 248 (784)
Q Consensus 178 yG~N~~~~~~~s~~----~ll~~~~~~pf~vfqi~~~~lw~l~~----y~~~~~~~l~~l~~~~~-~~~~~~~~~~~~l~ 248 (784)
|.+|.+...+.+++ ..|++||..|+++|.++..++.++.. .+...++.+++++++.. ...++..+..+.-+
T Consensus 1 ~~~N~i~tskY~~~~flp~~l~~qf~~~~N~yfl~i~ilq~ip~~s~~~~~t~~~pL~~v~~~~~~~~~~ed~~r~~~d~ 80 (1057)
T TIGR01652 1 FCSNKISTTKYTVLTFLPKNLFEQFKRFANLYFLVVALLQQVPILSPTYRGTSIVPLAFVLIVTAIKEAIEDIRRRRRDK 80 (1057)
T ss_pred CCCCcccCccCcchhhhHHHHHHHHHHHhhHHHHHHHHHHcCCCcCCCCccHhHHhHHHHHHHHHHHHHHHHHHHHHhHH
Confidence 67899988887664 77889999999887777777665532 12222333333222211 11222211111112
Q ss_pred hhhhCCceEEEEEc-CeEEEeecCCCCCCcEEEEcCCCCCCCCCCeecceeeEee-----CeeEeeccCCCCCCcceeec
Q 003952 249 RVRVDNQTIMVHRC-GKWVKLAGTDLVPGDVVSIGRSSGQTGEDKSVPADMLILG-----GSAIVNEAILTGESTPQWKV 322 (784)
Q Consensus 249 ~~~~~~~~v~V~R~-g~~~~I~s~~LvpGDiV~i~~ge~d~~~~~~vPaD~ill~-----G~~~VdES~LTGES~Pv~K~ 322 (784)
+. ++..++|+|+ |++++++++||+|||+|.|++|+ .||||++|++ |.|.||||+|||||.|+.|.
T Consensus 81 ~~--n~~~~~v~~~~~~~~~i~~~~l~~GDiv~l~~g~-------~iPaD~~ll~ss~~~g~~~v~~s~l~GEs~~~~k~ 151 (1057)
T TIGR01652 81 EV--NNRLTEVLEGHGQFVEIPWKDLRVGDIVKVKKDE-------RIPADLLLLSSSEPDGVCYVETANLDGETNLKLRQ 151 (1057)
T ss_pred HH--hCcEEEEECCCCcEEEeeeecccCCCEEEEcCCC-------cccceEEEEeccCCCceEEEEeeccCCeecceEee
Confidence 22 4678999997 89999999999999999999887 9999999997 78999999999999999998
Q ss_pred cccCCC--------------------Cccccc------c------ccCCCeeEEeeeeEeecCCCCCcCCCCCCCceEEE
Q 003952 323 SIMGRE--------------------TGEKLS------A------RRDKSHVLFGGTKILQHTPDKTFPLKTPDGGCLAV 370 (784)
Q Consensus 323 ~~~~~~--------------------~~~~~~------~------~~~~~~~lf~GT~v~~~~~~~~~~~~~~~g~~~~~ 370 (784)
+.+... +.+... . .-+..|++++||.+.. .|++.|+
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~i~~~~p~~~l~~F~G~~~~~~~~~~~l~~~N~l~rGs~l~n------------t~~~~gv 219 (1057)
T TIGR01652 152 ALEETQKMLDEDDIKNFSGEIECEQPNASLYSFQGNMTINGDRQYPLSPDNILLRGCTLRN------------TDWVIGV 219 (1057)
T ss_pred cchhhhccCChhhHhhceEEEEEcCCCCcceEEEEEEEECCCCcccCCHHHhHhcCCEecC------------CCeEEEE
Confidence 754211 000000 0 0124577777777772 4899999
Q ss_pred EEeeccccchhHHHHHhcccccccccchhHHHHHHHHHHHH----HHHHhhh--eeecCc-C-Cc-----------cchh
Q 003952 371 VLRTGFETSQGKLMRTILFSTERVTANSWESGLFILFLVVF----AVIAAGY--VLKKGM-E-DP-----------TRSK 431 (784)
Q Consensus 371 V~~TG~~T~~gkl~~~i~~~~~~~~~~~~~~~~fi~~ll~~----aii~~~~--~~~~~~-~-~~-----------~~~~ 431 (784)
|++||.+|..++ ....++.+.++.++....++.+++++ +++++.+ +|.... . .+ ....
T Consensus 220 VvyTG~~Tk~~~---n~~~~~~k~s~le~~ln~~~~~l~~~~i~l~~i~~i~~~~~~~~~~~~~~yl~~~~~~~~~~~~~ 296 (1057)
T TIGR01652 220 VVYTGHDTKLMR---NATQAPSKRSRLEKELNFLIIILFCLLFVLCLISSVGAGIWNDAHGKDLWYIRLDVSERNAAANG 296 (1057)
T ss_pred EEEEchhhhhhh---cCCCCcccccHHHHHHhhHHHHHHHHHHHHHHHHHHHHHheecccCCCccceecCcccccchhHH
Confidence 999999995544 44445556677776666555443322 2222221 221100 0 00 0112
Q ss_pred HHHHHHHHhhhhcccCCcchHHHHHHHHHHH------HHHHhc----CceecCCCCcCcCCceeEEEecccCcccCCceE
Q 003952 432 YKLFLSCSLIITSVIPPELPMELSIAVNTSL------IALARR----GIFCTEPFRIPFAGKVDMCCFDKTGTLTSDDME 501 (784)
Q Consensus 432 ~~~~l~~i~ii~~~vP~~Lp~~lslav~~s~------~~l~k~----~I~~~~~~~ie~lG~vd~icfDKTGTLT~~~m~ 501 (784)
...++.++.++..+||++||+.++++..... .+|.++ ++.+++...+|.||+|+++|+|||||||+|+|+
T Consensus 297 ~~~~~~~~~L~~~~IPisL~v~l~l~~~~~~~~i~~D~~m~~~~~~~~~~vr~~~~~E~LG~v~~I~sDKTGTLT~N~M~ 376 (1057)
T TIGR01652 297 FFSFLTFLILFSSLIPISLYVSLELVKSVQAYFINSDLQMYHEKTDTPASVRTSNLNEELGQVEYIFSDKTGTLTQNIME 376 (1057)
T ss_pred HHHHHHHHHHHhhhcceeeeehHHHHHHHHHHHHhhhhhhhccccCCcceeecCCChHHhcCeeEEEEcCCCceeeeeEE
Confidence 2356778889999999999999999987777 567764 599999999999999999999999999999999
Q ss_pred EEEEEecCCC-----c---------cc---c-------C--------------C--C----CCcHHHHHHHHhccceEee
Q 003952 502 FRGVVGLSNA-----E---------LE---D-------D--------------M--T----KVPVRTQEILASCHALVFV 537 (784)
Q Consensus 502 v~~i~~~~~~-----~---------~~---~-------~--------------~--~----~~~~~~~~~la~chsl~~~ 537 (784)
++++...+.. . .. + + . . +...+...+++.||++...
T Consensus 377 ~~~~~i~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~lC~~v~~~ 456 (1057)
T TIGR01652 377 FKKCSIAGVSYGDGFTEIKDAIRERLGSYVENENSMLVESKGFTFVDPRLVDLLKTNKPNAKRINEFFLALALCHTVVPE 456 (1057)
T ss_pred EEEEEECCEEecCCcchHHHHhhhcccccccccccccccccccccCcHHHHHhhhcCCchhHHHHHHHHHHHhcCccccc
Confidence 9998643210 0 00 0 0 0 0 0012355688999998754
Q ss_pred --CCc---c---cCCHHHHHHHhcc---CccccCCCcc-----ccCCCCCcceeEEEEEccCCCCCeeEEEEEECC-EEE
Q 003952 538 --DNK---L---VGDPLEKAALKGI---DWSYKSDEKA-----MPKRGGGNAVQIVQRHHFASHLKRMSVVVRVQE-EFF 600 (784)
Q Consensus 538 --~~~---~---~gdple~All~~~---~~~~~~~~~~-----~~~~~~~~~~~il~~~~Fss~~krmsviv~~~~-~~~ 600 (784)
+++ . .|+|+|.|+++++ |+.+...+.. .+..+....+++++.+||+|++|||||+++.++ +++
T Consensus 457 ~~~~~~~~~~y~~~sp~E~ALl~~a~~~g~~~~~~~~~~~~~~i~~~~~~~~~~il~~~pF~s~rKrmSviv~~~~~~~~ 536 (1057)
T TIGR01652 457 FNDDGPEEITYQAASPDEAALVKAARDVGFVFFERTPKSISLLIEMHGETKEYEILNVLEFNSDRKRMSVIVRNPDGRIK 536 (1057)
T ss_pred ccCCCCCceEEEccCCcHHHHHHHHHHCCCEEEEecCCceEEEEEeCCCEEEEEEEEecccCCCCCeEEEEEEeCCCeEE
Confidence 222 1 5899999999865 5544322211 122234457999999999999999999999865 688
Q ss_pred EEEeCchHHHHHhhccC----chhHHHHHHHHhhccCeEEEEEEEeCCCCChhhHh-----------------hhhhhhc
Q 003952 601 AFVKGAPETIQDRLTDL----PSSYIETYKKYTHQGSRVLALAFKSLPDMTVSDAR-----------------SLHRDEV 659 (784)
Q Consensus 601 ~~~KGapE~I~~~~~~~----p~~~~~~~~~~~~~G~Rvlala~k~l~~~~~~~~~-----------------~~~r~~~ 659 (784)
+++|||||.|.++|... ++.+.+.+++|+++|+||+++|||.+++.+..++. ...++++
T Consensus 537 l~~KGA~e~il~~~~~~~~~~~~~~~~~~~~~a~~GlRtL~~A~k~l~~~e~~~~~~~~~~a~~~~~~r~~~~~~~~~~i 616 (1057)
T TIGR01652 537 LLCKGADTVIFKRLSSGGNQVNEETKEHLENYASEGLRTLCIAYRELSEEEYEEWNEEYNEASTALTDREEKLDVVAESI 616 (1057)
T ss_pred EEEeCcHHHHHHHhhccchhHHHHHHHHHHHHHHcCCcEEEEEEEECCHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHH
Confidence 99999999999999642 45677889999999999999999999754332211 0113568
Q ss_pred cCCcEEEEEEeecCCCCcchHHHHHHHhhCCCcEEEEcCCCHHHHHHHHHHcccccCCcEEEecCCCCCeeEEeCCCccc
Q 003952 660 ENGLTFAGFAVFNCPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLILCPVKNGKVYEWVSPDETE 739 (784)
Q Consensus 660 E~~l~flG~l~~~d~lr~da~~~I~~L~~agi~v~MITGDn~~TA~~VA~~~gI~~~~~~il~~~~~~~~~~~~~~~~~~ 739 (784)
|+||+|+|+++++||||+|++++|+.||+|||++||+|||+++||++||++|||++....+..-+.+.. -.+...++
T Consensus 617 E~~L~~lG~~gieD~lq~~v~etI~~L~~AGIkv~mlTGD~~~TA~~IA~~~~ii~~~~~~~~i~~~~~-~~~~~~~~-- 693 (1057)
T TIGR01652 617 EKDLILLGATAIEDKLQEGVPETIELLRQAGIKIWVLTGDKVETAINIGYSCRLLSRNMEQIVITSESL-DATRSVEA-- 693 (1057)
T ss_pred HhcCEEEEEEEEhhhhhhccHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCeEEEEecCch-hhhHHHHH--
Confidence 999999999999999999999999999999999999999999999999999999965443221111000 00000000
Q ss_pred ccccch----hhh--hccCCCeeEEEechhHHHHhcCc---hHhhhccccE--EeC
Q 003952 740 KIQYSE----KEV--EGLTDAHDLCIGGDCFEMLQQTS---AVLRVIPYVK--VLK 784 (784)
Q Consensus 740 ~~~~~~----~~~--~~l~~~~~l~~tGd~l~~l~~~~---~~~~~~~~~~--VfA 784 (784)
.+.... ... ....+++.++++|+.|+.++++. .+.+++.+|+ |||
T Consensus 694 ~i~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~f~~l~~~~~~vV~a 749 (1057)
T TIGR01652 694 AIKFGLEGTSEEFNNLGDSGNVALVIDGKSLGYALDEELEKEFLQLALKCKAVICC 749 (1057)
T ss_pred HHHHHHHHHHHhhhhhccCCceEEEEccHHHHHHHhhHHHHHHHHHHhhCCEEEEe
Confidence 000000 000 01123456999999999988753 4677887776 775
No 17
>PRK14010 potassium-transporting ATPase subunit B; Provisional
Probab=100.00 E-value=4.5e-66 Score=597.52 Aligned_cols=422 Identities=16% Similarity=0.167 Sum_probs=319.5
Q ss_pred HHHHHHHHHhhhh-CC-ceEE-EEEcCeEEEeecCCCCCCcEEEEcCCCCCCCCCCeecceeeEeeCeeEeeccCCCCCC
Q 003952 240 RLKTLTEIRRVRV-DN-QTIM-VHRCGKWVKLAGTDLVPGDVVSIGRSSGQTGEDKSVPADMLILGGSAIVNEAILTGES 316 (784)
Q Consensus 240 ~~~~~~~l~~~~~-~~-~~v~-V~R~g~~~~I~s~~LvpGDiV~i~~ge~d~~~~~~vPaD~ill~G~~~VdES~LTGES 316 (784)
+.|+.+.++.+.. .+ .+++ |.|||++++|++++|+|||+|.+++|+ +|||||+|++|++.||||+|||||
T Consensus 87 e~ra~~~~~~L~~~~~~~~a~~v~rdg~~~~I~a~eLv~GDiV~v~~Gd-------~IPaDG~vieG~~~VDESaLTGES 159 (673)
T PRK14010 87 EGRGKAQANALRQTQTEMKARRIKQDGSYEMIDASDLKKGHIVRVATGE-------QIPNDGKVIKGLATVDESAITGES 159 (673)
T ss_pred HHHHHHHHHHHHcCCCcceEEEEEeCCEEEEEEHHHcCCCCEEEECCCC-------cccCCeEEEEcceEEecchhcCCC
Confidence 4455444444443 23 3565 789999999999999999999999887 999999999999999999999999
Q ss_pred cceeeccccCCCCccccccccCCCeeEEeeeeEeecCCCCCcCCCCCCCceEEEEEeeccccchhHHHHHhccccccccc
Q 003952 317 TPQWKVSIMGRETGEKLSARRDKSHVLFGGTKILQHTPDKTFPLKTPDGGCLAVVLRTGFETSQGKLMRTILFSTERVTA 396 (784)
Q Consensus 317 ~Pv~K~~~~~~~~~~~~~~~~~~~~~lf~GT~v~~~~~~~~~~~~~~~g~~~~~V~~TG~~T~~gkl~~~i~~~~~~~~~ 396 (784)
.|+.|++- +++ +.+|+||.+. +|.+.++|++||.+|..||+++++..+++++++
T Consensus 160 ~PV~K~~g------------~d~-~~V~aGT~v~-------------~G~~~i~Vta~g~~T~lgki~~lve~a~~~ktp 213 (673)
T PRK14010 160 APVIKESG------------GDF-DNVIGGTSVA-------------SDWLEVEITSEPGHSFLDKMIGLVEGATRKKTP 213 (673)
T ss_pred CceeccCC------------Ccc-CeeecCceee-------------cceEEEEEEEecccCHHHHHHHHHhhccccCCH
Confidence 99999861 112 4599999999 899999999999999999999999888877888
Q ss_pred chhHHHHHHHHHHHHHHHHhhheeecCcCCccchhHHHHHHHHhhhhcccCCcchHHHHHHHHHHHHHHHhcCceecCCC
Q 003952 397 NSWESGLFILFLVVFAVIAAGYVLKKGMEDPTRSKYKLFLSCSLIITSVIPPELPMELSIAVNTSLIALARRGIFCTEPF 476 (784)
Q Consensus 397 ~~~~~~~fi~~ll~~aii~~~~~~~~~~~~~~~~~~~~~l~~i~ii~~~vP~~Lp~~lslav~~s~~~l~k~~I~~~~~~ 476 (784)
++.....+...+.+++++...+++..... ......+...+.+++.+||++||..++++...++.+|+|+|+++|++.
T Consensus 214 ~e~~l~~l~~~l~ii~l~~~~~~~~~~~~---~~~~~~~~~~val~V~~IP~aL~~~~~~~~~~g~~r~ak~gvLvk~~~ 290 (673)
T PRK14010 214 NEIALFTLLMTLTIIFLVVILTMYPLAKF---LNFNLSIAMLIALAVCLIPTTIGGLLSAIGIAGMDRVTQFNILAKSGR 290 (673)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHHhh---ccHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhhCCEEEeCcH
Confidence 77554443332322222222211111100 012223444556666778999999999999999999999999999999
Q ss_pred CcCcCCceeEEEecccCcccCCceEEEEEEecCCCccccCCCCCcHHHHHHHHhccceEeeCCcccCCHHHHHHHhccCc
Q 003952 477 RIPFAGKVDMCCFDKTGTLTSDDMEFRGVVGLSNAELEDDMTKVPVRTQEILASCHALVFVDNKLVGDPLEKAALKGIDW 556 (784)
Q Consensus 477 ~ie~lG~vd~icfDKTGTLT~~~m~v~~i~~~~~~~~~~~~~~~~~~~~~~la~chsl~~~~~~~~gdple~All~~~~~ 556 (784)
.+|.+|++|++|||||||||+|++.+..+.+.++. ...+.....+.|+.. ..||+++|+++++.-
T Consensus 291 avE~lg~v~vI~~DKTGTLT~Gn~~~~~~~~~~~~--------~~~~ll~~a~~~~~~-------s~~P~~~AIv~~a~~ 355 (673)
T PRK14010 291 SVETCGDVNVLILDKTGTITYGNRMADAFIPVKSS--------SFERLVKAAYESSIA-------DDTPEGRSIVKLAYK 355 (673)
T ss_pred HHHHhhCCCEEEEeCCCcCCCCCeEEEEEEeCCCc--------cHHHHHHHHHHhcCC-------CCChHHHHHHHHHHH
Confidence 99999999999999999999988887776543321 011223333344422 359999999987631
Q ss_pred cccCCCccccCCCCCcceeEEEEEccCCCCCeeEEEEEECCEEEEEEeCchHHHHHhhc----cCchhHHHHHHHHhhcc
Q 003952 557 SYKSDEKAMPKRGGGNAVQIVQRHHFASHLKRMSVVVRVQEEFFAFVKGAPETIQDRLT----DLPSSYIETYKKYTHQG 632 (784)
Q Consensus 557 ~~~~~~~~~~~~~~~~~~~il~~~~Fss~~krmsviv~~~~~~~~~~KGapE~I~~~~~----~~p~~~~~~~~~~~~~G 632 (784)
. +.. . .....+..||++++|+|++.+ +++ .+.|||||.+.++|. ..|.++++..++++++|
T Consensus 356 ~---~~~-~-------~~~~~~~~pF~~~~k~~gv~~--~g~--~i~kGa~~~il~~~~~~g~~~~~~~~~~~~~~a~~G 420 (673)
T PRK14010 356 Q---HID-L-------PQEVGEYIPFTAETRMSGVKF--TTR--EVYKGAPNSMVKRVKEAGGHIPVDLDALVKGVSKKG 420 (673)
T ss_pred c---CCC-c-------hhhhcceeccccccceeEEEE--CCE--EEEECCHHHHHHHhhhcCCCCchHHHHHHHHHHhCC
Confidence 1 000 0 000123479999999999874 343 566999999999985 34667778888999999
Q ss_pred CeEEEEEEEeCCCCChhhHhhhhhhhccCCcEEEEEEeecCCCCcchHHHHHHHhhCCCcEEEEcCCCHHHHHHHHHHcc
Q 003952 633 SRVLALAFKSLPDMTVSDARSLHRDEVENGLTFAGFAVFNCPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVH 712 (784)
Q Consensus 633 ~Rvlala~k~l~~~~~~~~~~~~r~~~E~~l~flG~l~~~d~lr~da~~~I~~L~~agi~v~MITGDn~~TA~~VA~~~g 712 (784)
+|+++++ .|++++|+++++||+|||++++|++||++||+++||||||+.||.+||+++|
T Consensus 421 ~~~l~v~---------------------~~~~~lG~i~l~Dp~R~~a~e~I~~Lr~~GI~vvMiTGDn~~TA~aIA~elG 479 (673)
T PRK14010 421 GTPLVVL---------------------EDNEILGVIYLKDVIKDGLVERFRELREMGIETVMCTGDNELTAATIAKEAG 479 (673)
T ss_pred CeEEEEE---------------------ECCEEEEEEEeecCCcHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcC
Confidence 9999987 4679999999999999999999999999999999999999999999999999
Q ss_pred cccCCcEEEecCCCCCeeEEeCCCcccccccchhhhhccCCCee-EEEechhHHHH
Q 003952 713 IVTKPVLILCPVKNGKVYEWVSPDETEKIQYSEKEVEGLTDAHD-LCIGGDCFEML 767 (784)
Q Consensus 713 I~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-l~~tGd~l~~l 767 (784)
|.+....+.+++ |.+.++++|++++ ++|||||+|+.
T Consensus 480 I~~v~A~~~Ped-------------------K~~iV~~lQ~~G~~VaMtGDGvNDA 516 (673)
T PRK14010 480 VDRFVAECKPED-------------------KINVIREEQAKGHIVAMTGDGTNDA 516 (673)
T ss_pred CceEEcCCCHHH-------------------HHHHHHHHHhCCCEEEEECCChhhH
Confidence 964322222111 4556677777665 89999999986
No 18
>PRK01122 potassium-transporting ATPase subunit B; Provisional
Probab=100.00 E-value=4.3e-65 Score=589.88 Aligned_cols=427 Identities=17% Similarity=0.171 Sum_probs=326.7
Q ss_pred HHHHHHHHHHHHHHhhhh-CCc-eEEEEEcCe-EEEeecCCCCCCcEEEEcCCCCCCCCCCeecceeeEeeCeeEeeccC
Q 003952 235 TMAKSRLKTLTEIRRVRV-DNQ-TIMVHRCGK-WVKLAGTDLVPGDVVSIGRSSGQTGEDKSVPADMLILGGSAIVNEAI 311 (784)
Q Consensus 235 ~~~~~~~~~~~~l~~~~~-~~~-~v~V~R~g~-~~~I~s~~LvpGDiV~i~~ge~d~~~~~~vPaD~ill~G~~~VdES~ 311 (784)
...+++.|+.+.++.+.. .|. .++|+|+|+ +++|++++|+|||+|.+++|+ .|||||++++|.+.||||+
T Consensus 82 ~e~~ae~ra~~~~~sL~~l~~~~~a~vir~g~~~~~V~~~eL~~GDiV~v~~Gd-------~IPaDG~vieG~a~VDESa 154 (679)
T PRK01122 82 AEALAEGRGKAQADSLRGAKKDTFARKLREPGAAEEVPATELRKGDIVLVEAGE-------IIPADGEVIEGVASVDESA 154 (679)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCCeEEEEECCCEEEEEEHHHcCCCCEEEEcCCC-------EEEEEEEEEEccEEEEccc
Confidence 344555555555555544 343 699999988 999999999999999999887 9999999999999999999
Q ss_pred CCCCCcceeeccccCCCCccccccccCCCeeEEeeeeEeecCCCCCcCCCCCCCceEEEEEeeccccchhHHHHHhcccc
Q 003952 312 LTGESTPQWKVSIMGRETGEKLSARRDKSHVLFGGTKILQHTPDKTFPLKTPDGGCLAVVLRTGFETSQGKLMRTILFST 391 (784)
Q Consensus 312 LTGES~Pv~K~~~~~~~~~~~~~~~~~~~~~lf~GT~v~~~~~~~~~~~~~~~g~~~~~V~~TG~~T~~gkl~~~i~~~~ 391 (784)
|||||.|+.|++- +..+.+|+||.|+ +|.+.++|+++|.+|..||+++++...+
T Consensus 155 LTGES~PV~K~~G-------------~~~~~V~aGT~v~-------------~G~~~i~Vta~g~~S~lgki~~lve~a~ 208 (679)
T PRK01122 155 ITGESAPVIRESG-------------GDFSSVTGGTRVL-------------SDWIVIRITANPGESFLDRMIALVEGAK 208 (679)
T ss_pred ccCCCCceEeCCC-------------CccCeEEeceEEE-------------eeeEEEEEEEecccCHHHHHHHHHHhcc
Confidence 9999999999861 1122399999999 8999999999999999999999998877
Q ss_pred cccccchhHHHHHHHHHHH---HHHHHh-hheeecCcCCccchhHHHHHHHHhhhhcccCCcchHHHHHHHHHHHHHHHh
Q 003952 392 ERVTANSWESGLFILFLVV---FAVIAA-GYVLKKGMEDPTRSKYKLFLSCSLIITSVIPPELPMELSIAVNTSLIALAR 467 (784)
Q Consensus 392 ~~~~~~~~~~~~fi~~ll~---~aii~~-~~~~~~~~~~~~~~~~~~~l~~i~ii~~~vP~~Lp~~lslav~~s~~~l~k 467 (784)
.++++++.....+...+.+ ++++.. .+.++.+ .. ..+..++.+++++||++|+..++++...++.+|+|
T Consensus 209 ~~ktp~e~al~~l~~~l~~i~l~~~~~~~~~~~~~g-----~~--~~l~~~iallV~aiP~alg~l~~~i~i~g~~r~ak 281 (679)
T PRK01122 209 RQKTPNEIALTILLAGLTIIFLLVVATLPPFAAYSG-----GA--LSITVLVALLVCLIPTTIGGLLSAIGIAGMDRVLQ 281 (679)
T ss_pred ccCCHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHhC-----ch--HHHHHHHHHHHHcccchhhhHHHHHHHHHHHHHhc
Confidence 7778776543332221111 111111 1111112 11 24566678889999999999999999999999999
Q ss_pred cCceecCCCCcCcCCceeEEEecccCcccCCceEEEEEEecCCCccccCCCCCcHHHHHHHHhccceEeeCCcccCCHHH
Q 003952 468 RGIFCTEPFRIPFAGKVDMCCFDKTGTLTSDDMEFRGVVGLSNAELEDDMTKVPVRTQEILASCHALVFVDNKLVGDPLE 547 (784)
Q Consensus 468 ~~I~~~~~~~ie~lG~vd~icfDKTGTLT~~~m~v~~i~~~~~~~~~~~~~~~~~~~~~~la~chsl~~~~~~~~gdple 547 (784)
+|+++|++..+|.+|++|++|||||||||+|+|.+..+...++. ...+.....+.|... ..||.+
T Consensus 282 ~gvLvk~~~avE~lg~v~~I~~DKTGTLT~g~~~v~~~~~~~~~--------~~~~ll~~a~~~s~~-------s~hP~~ 346 (679)
T PRK01122 282 ANVIATSGRAVEAAGDVDTLLLDKTGTITLGNRQASEFLPVPGV--------TEEELADAAQLSSLA-------DETPEG 346 (679)
T ss_pred CCeeecCchHHHHhcCCCEEEEeCCCCCcCCcEEEEEEEeCCCC--------CHHHHHHHHHHhcCC-------CCCchH
Confidence 99999999999999999999999999999999999998764331 011223333334322 248999
Q ss_pred HHHHhccCccccCCCccccCCCCCcceeEEEEEccCCCCCeeEEEEEECCEEEEEEeCchHHHHHhhc----cCchhHHH
Q 003952 548 KAALKGIDWSYKSDEKAMPKRGGGNAVQIVQRHHFASHLKRMSVVVRVQEEFFAFVKGAPETIQDRLT----DLPSSYIE 623 (784)
Q Consensus 548 ~All~~~~~~~~~~~~~~~~~~~~~~~~il~~~~Fss~~krmsviv~~~~~~~~~~KGapE~I~~~~~----~~p~~~~~ 623 (784)
+|+++++.-..+... ....++..+.+||++.+++|++.. ++ ..++|||||.+.+.|. .+|+++++
T Consensus 347 ~AIv~~a~~~~~~~~-------~~~~~~~~~~~pF~s~~~~~gv~~--~g--~~~~kGa~e~il~~~~~~g~~~~~~~~~ 415 (679)
T PRK01122 347 RSIVVLAKQRFNLRE-------RDLQSLHATFVPFSAQTRMSGVDL--DG--REIRKGAVDAIRRYVESNGGHFPAELDA 415 (679)
T ss_pred HHHHHHHHhhcCCCc-------hhhccccceeEeecCcCceEEEEE--CC--EEEEECCHHHHHHHHHhcCCcChHHHHH
Confidence 999987642111000 001134567789999988888754 34 3789999999999984 35778888
Q ss_pred HHHHHhhccCeEEEEEEEeCCCCChhhHhhhhhhhccCCcEEEEEEeecCCCCcchHHHHHHHhhCCCcEEEEcCCCHHH
Q 003952 624 TYKKYTHQGSRVLALAFKSLPDMTVSDARSLHRDEVENGLTFAGFAVFNCPIREDSAKILSELKNSSQDLAMITGDQALT 703 (784)
Q Consensus 624 ~~~~~~~~G~Rvlala~k~l~~~~~~~~~~~~r~~~E~~l~flG~l~~~d~lr~da~~~I~~L~~agi~v~MITGDn~~T 703 (784)
..++++++|.|++++| .|++++|+++++||+|||++++|++||++||+++|+||||+.|
T Consensus 416 ~~~~~a~~G~~~l~va---------------------~~~~~lG~i~l~D~~R~~~~eai~~Lr~~GI~vvMiTGDn~~T 474 (679)
T PRK01122 416 AVDEVARKGGTPLVVA---------------------EDNRVLGVIYLKDIVKPGIKERFAELRKMGIKTVMITGDNPLT 474 (679)
T ss_pred HHHHHHhCCCcEEEEE---------------------ECCeEEEEEEEeccCchhHHHHHHHHHHCCCeEEEECCCCHHH
Confidence 8899999999999999 3678999999999999999999999999999999999999999
Q ss_pred HHHHHHHcccccCCcEEEecCCCCCeeEEeCCCcccccccchhhhhccCCCee-EEEechhHHHH
Q 003952 704 ACYVASQVHIVTKPVLILCPVKNGKVYEWVSPDETEKIQYSEKEVEGLTDAHD-LCIGGDCFEML 767 (784)
Q Consensus 704 A~~VA~~~gI~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-l~~tGd~l~~l 767 (784)
|.+||+++||.+....+.++ + |.+.++++|++++ ++|+|||.|+.
T Consensus 475 A~aIA~elGId~v~A~~~Pe-------------d------K~~iV~~lQ~~G~~VaMtGDGvNDA 520 (679)
T PRK01122 475 AAAIAAEAGVDDFLAEATPE-------------D------KLALIRQEQAEGRLVAMTGDGTNDA 520 (679)
T ss_pred HHHHHHHcCCcEEEccCCHH-------------H------HHHHHHHHHHcCCeEEEECCCcchH
Confidence 99999999995422222111 1 4455677777665 89999999986
No 19
>PLN03190 aminophospholipid translocase; Provisional
Probab=100.00 E-value=3.2e-64 Score=615.96 Aligned_cols=585 Identities=18% Similarity=0.235 Sum_probs=384.7
Q ss_pred hcCCCCccCCCCccHHHHHH----HHhhhhHHHHHHHhhhhcccchh----hhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 003952 176 EKWGRNVFEYPQPTFQKLMK----ENCMEPFFVFQVFCVGLWCLDEY----WYYSLFTLFMLFMFESTMAKSRLKTLTEI 247 (784)
Q Consensus 176 ~~yG~N~~~~~~~s~~~ll~----~~~~~pf~vfqi~~~~lw~l~~y----~~~~~~~l~~l~~~~~~~~~~~~~~~~~l 247 (784)
.+|..|.+...+.+++.++. +||..+.++|.++..++-++... ....++-|++++++ ........+.++-
T Consensus 85 ~~f~~N~i~TsKYt~~tFlP~~L~eQF~r~aN~YFL~I~ilq~ip~~s~~~~~t~~~PL~~vl~v--~~ike~~Ed~~r~ 162 (1178)
T PLN03190 85 FEFAGNSIRTAKYSVFSFLPRNLFEQFHRVAYIYFLVIAVLNQLPQLAVFGRGASILPLAFVLLV--TAVKDAYEDWRRH 162 (1178)
T ss_pred ccCCCCeeeccccccHHHHHHHHHHHHHhhhhHHHHHHHHHHhCCCcccCCcchHHHHHHHHHHH--HHHHHHHHHHHHH
Confidence 35999999999988776664 55555556655555555443321 22222222222222 2222222222222
Q ss_pred Hhhh-hCCceEEEEEcCeEEEeecCCCCCCcEEEEcCCCCCCCCCCeecceeeEee-----CeeEeeccCCCCCCcceee
Q 003952 248 RRVR-VDNQTIMVHRCGKWVKLAGTDLVPGDVVSIGRSSGQTGEDKSVPADMLILG-----GSAIVNEAILTGESTPQWK 321 (784)
Q Consensus 248 ~~~~-~~~~~v~V~R~g~~~~I~s~~LvpGDiV~i~~ge~d~~~~~~vPaD~ill~-----G~~~VdES~LTGES~Pv~K 321 (784)
+... .++..++|+|+|+++++++++|+|||+|.|++|| .+|||++|++ |.|.||||+|||||.|+.|
T Consensus 163 k~d~~~N~~~~~v~~~~~~~~i~~~~i~vGDiv~v~~ge-------~iPaD~~ll~Ss~~~G~~~Vdts~LdGEt~~k~k 235 (1178)
T PLN03190 163 RSDRIENNRLAWVLVDDQFQEKKWKDIRVGEIIKIQAND-------TLPCDMVLLSTSDPTGVAYVQTINLDGESNLKTR 235 (1178)
T ss_pred HhHHhhcCcEEEEEECCeEEEEeHHHCCCCCEEEECCCC-------EeeeeEEEEeccCCCceEEEEccccCCeeeeeEe
Confidence 2221 2567899999999999999999999999999887 9999999997 8899999999999999999
Q ss_pred ccccCC------------------CCccccccc-----------cCCCeeEEeeeeEeecCCCCCcCCCCCCCceEEEEE
Q 003952 322 VSIMGR------------------ETGEKLSAR-----------RDKSHVLFGGTKILQHTPDKTFPLKTPDGGCLAVVL 372 (784)
Q Consensus 322 ~~~~~~------------------~~~~~~~~~-----------~~~~~~lf~GT~v~~~~~~~~~~~~~~~g~~~~~V~ 372 (784)
.+.+.. |+.+.+... -+.+|++..|+.+.. ..++.|+|+
T Consensus 236 ~~~~~~~~~~~~~~~~~~~i~~e~Pn~~l~~F~G~i~~~~~~~~l~~~n~llRG~~Lrn------------T~~i~GvVV 303 (1178)
T PLN03190 236 YAKQETLSKIPEKEKINGLIKCEKPNRNIYGFQANMEVDGKRLSLGPSNIILRGCELKN------------TAWAIGVAV 303 (1178)
T ss_pred cccchhhhcchhhhhceEEEEEeCCCccceeEEEEEEECCCcccCCccceeeccceecC------------CceEEEEEE
Confidence 875321 111111111 022455555555552 578999999
Q ss_pred eeccccchhHHHHHhcccccccccchhHHHHHHHHHH----HHHHHHhhh--eeec-CcCC-----c------------c
Q 003952 373 RTGFETSQGKLMRTILFSTERVTANSWESGLFILFLV----VFAVIAAGY--VLKK-GMED-----P------------T 428 (784)
Q Consensus 373 ~TG~~T~~gkl~~~i~~~~~~~~~~~~~~~~fi~~ll----~~aii~~~~--~~~~-~~~~-----~------------~ 428 (784)
+||.+| |++.....+..+.+..++....++.+++ ++++++++. +|.. +..+ . .
T Consensus 304 YTG~dT---K~~~N~~~~~~K~S~le~~~N~~vi~l~~i~~~l~~i~~i~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~ 380 (1178)
T PLN03190 304 YCGRET---KAMLNNSGAPSKRSRLETRMNLEIIILSLFLIALCTIVSVCAAVWLRRHRDELDTIPFYRRKDFSEGGPKN 380 (1178)
T ss_pred Eechhh---hHhhcCCCCCCCccHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhhhccccccccccccccccccccccccc
Confidence 999999 4555544444456666666555443332 222222211 2211 1000 0 0
Q ss_pred -------chhHHHHHHHHhhhhcccCCcchHHHHHHHHHHHHHHHhcC----------ceecCCCCcCcCCceeEEEecc
Q 003952 429 -------RSKYKLFLSCSLIITSVIPPELPMELSIAVNTSLIALARRG----------IFCTEPFRIPFAGKVDMCCFDK 491 (784)
Q Consensus 429 -------~~~~~~~l~~i~ii~~~vP~~Lp~~lslav~~s~~~l~k~~----------I~~~~~~~ie~lG~vd~icfDK 491 (784)
......++.++.++..+||.+|++.+.++-......+.+.. ..|++....|.||+|+++|+||
T Consensus 381 ~~~~~~~~~~~~~f~~~lil~~~~IPISL~Vtleivk~~qa~~I~~D~~m~~~~~~~~~~vr~snl~EeLGqV~yIfSDK 460 (1178)
T PLN03190 381 YNYYGWGWEIFFTFLMSVIVFQIMIPISLYISMELVRVGQAYFMIRDDQMYDEASNSRFQCRALNINEDLGQIKYVFSDK 460 (1178)
T ss_pred cccchhhHHHHHHHHHHHHHHHhhcceeeeeeHHHHHHHHHHHHHhhhhcccccCCCcceeccCcchhhhccceEEEEcC
Confidence 00123345556777899999999999998865444444322 6789999999999999999999
Q ss_pred cCcccCCceEEEEEEecC-----CCc-----------------cccC--C------------C-C-----CcHHHHHHHH
Q 003952 492 TGTLTSDDMEFRGVVGLS-----NAE-----------------LEDD--M------------T-K-----VPVRTQEILA 529 (784)
Q Consensus 492 TGTLT~~~m~v~~i~~~~-----~~~-----------------~~~~--~------------~-~-----~~~~~~~~la 529 (784)
|||||+|+|.++.+...+ +.. ..+. . . . .-.+...+++
T Consensus 461 TGTLT~N~M~fk~~~i~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~fl~~la 540 (1178)
T PLN03190 461 TGTLTENKMEFQCASIWGVDYSDGRTPTQNDHAGYSVEVDGKILRPKMKVKVDPQLLELSKSGKDTEEAKHVHDFFLALA 540 (1178)
T ss_pred CCccccceEEEEEEEECCEEcccccccchhhhhccccccccccccccccccCCHHHHhhhhccccchhhHHHHHHHHHHH
Confidence 999999999999875421 000 0000 0 0 0 0124567899
Q ss_pred hccceEee--CC---------ccc-CCHHHHHHHhcc---CccccCCCc---cccCCCCCcceeEEEEEccCCCCCeeEE
Q 003952 530 SCHALVFV--DN---------KLV-GDPLEKAALKGI---DWSYKSDEK---AMPKRGGGNAVQIVQRHHFASHLKRMSV 591 (784)
Q Consensus 530 ~chsl~~~--~~---------~~~-gdple~All~~~---~~~~~~~~~---~~~~~~~~~~~~il~~~~Fss~~krmsv 591 (784)
.||++... ++ +.. ++|.|.|+++++ |..+...+. .....+....+++++.+||+|++|||||
T Consensus 541 lChtv~~~~~~~~~~~~~~~~~Y~a~SPdE~ALv~~a~~~G~~l~~r~~~~i~i~~~~~~~~~~il~~~pF~S~rKrMSv 620 (1178)
T PLN03190 541 ACNTIVPIVVDDTSDPTVKLMDYQGESPDEQALVYAAAAYGFMLIERTSGHIVIDIHGERQRFNVLGLHEFDSDRKRMSV 620 (1178)
T ss_pred hcCCceeeccCCCCCccccceEEecCCCcHHHHHHHHHHCCCeEecccCCeEEEeeccceecceeEEEecccccccEEEE
Confidence 99998652 11 123 489999999876 333322221 1123344567999999999999999999
Q ss_pred EEEEC-CEEEEEEeCchHHHHHhhcc-----CchhHHHHHHHHhhccCeEEEEEEEeCCCCChhhHhh------------
Q 003952 592 VVRVQ-EEFFAFVKGAPETIQDRLTD-----LPSSYIETYKKYTHQGSRVLALAFKSLPDMTVSDARS------------ 653 (784)
Q Consensus 592 iv~~~-~~~~~~~KGapE~I~~~~~~-----~p~~~~~~~~~~~~~G~Rvlala~k~l~~~~~~~~~~------------ 653 (784)
+++.+ +++++++|||||.|.++|.. .++.+.+.+++|+++|+|||++|||.+++.+.+++..
T Consensus 621 Iv~~~~~~~~l~~KGA~e~il~~~~~~~~~~~~~~~~~~l~~~a~~GlRtL~lA~k~l~~~e~~~~~~~~~~a~~~~~~r 700 (1178)
T PLN03190 621 ILGCPDKTVKVFVKGADTSMFSVIDRSLNMNVIRATEAHLHTYSSLGLRTLVVGMRELNDSEFEQWHFSFEAASTALIGR 700 (1178)
T ss_pred EEEcCCCcEEEEEecCcHHHHHhhcccccchhHHHHHHHHHHHHhcCCceEEEEEEeCCHHHHhhHHHHHHHhhhhhhhh
Confidence 99975 46889999999999999953 3556788899999999999999999997543332110
Q ss_pred -----hhhhhccCCcEEEEEEeecCCCCcchHHHHHHHhhCCCcEEEEcCCCHHHHHHHHHHcccccCCcEEEecCCCCC
Q 003952 654 -----LHRDEVENGLTFAGFAVFNCPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLILCPVKNGK 728 (784)
Q Consensus 654 -----~~r~~~E~~l~flG~l~~~d~lr~da~~~I~~L~~agi~v~MITGDn~~TA~~VA~~~gI~~~~~~il~~~~~~~ 728 (784)
.-++++|+||+|+|+++++||||++++++|+.|+++||++||+|||++.||++||++|||++.....+.-+.+..
T Consensus 701 ~~~l~~~~~~iE~dL~~lG~~~~~D~lr~~v~~~I~~l~~agi~v~mlTGD~~~tAi~IA~s~~Ll~~~~~~i~i~~~~~ 780 (1178)
T PLN03190 701 AALLRKVASNVENNLTILGASAIEDKLQQGVPEAIESLRTAGIKVWVLTGDKQETAISIGYSSKLLTNKMTQIIINSNSK 780 (1178)
T ss_pred HHHHHhhHHhhhcCcEEEEEEEEecCCchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHhCCCCCCCeeEEecCCch
Confidence 112568999999999999999999999999999999999999999999999999999999966533221111110
Q ss_pred eeEEeCCCcc----ccccc------ch-hhhhccCCCeeEEEechhHHHHhcC---chHhhhccccE--EeC
Q 003952 729 VYEWVSPDET----EKIQY------SE-KEVEGLTDAHDLCIGGDCFEMLQQT---SAVLRVIPYVK--VLK 784 (784)
Q Consensus 729 ~~~~~~~~~~----~~~~~------~~-~~~~~l~~~~~l~~tGd~l~~l~~~---~~~~~~~~~~~--VfA 784 (784)
.-.|...++. ..... +. ........+..++++|+.|+.++++ ..+.+++.+|+ |||
T Consensus 781 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lVIdG~~L~~~l~~~~~~~f~~l~~~~~~VI~c 852 (1178)
T PLN03190 781 ESCRKSLEDALVMSKKLTTVSGISQNTGGSSAAASDPVALIIDGTSLVYVLDSELEEQLFQLASKCSVVLCC 852 (1178)
T ss_pred hhHHHHHHHHhhhhhhccccccccccccccccccCCceEEEEEcHHHHHHhhhHHHHHHHHHHHhCCEEEEe
Confidence 0000000000 00000 00 0000112345699999999999864 46788888887 454
No 20
>TIGR01497 kdpB K+-transporting ATPase, B subunit. One sequence is apparently mis-annotated in the primary literature, but properly annotated by TIGR.
Probab=100.00 E-value=1.6e-62 Score=567.22 Aligned_cols=431 Identities=17% Similarity=0.144 Sum_probs=321.2
Q ss_pred HHHHHHHHHHHHHHHhhhh-CC-ceEEEEE-cCeEEEeecCCCCCCcEEEEcCCCCCCCCCCeecceeeEeeCeeEeecc
Q 003952 234 STMAKSRLKTLTEIRRVRV-DN-QTIMVHR-CGKWVKLAGTDLVPGDVVSIGRSSGQTGEDKSVPADMLILGGSAIVNEA 310 (784)
Q Consensus 234 ~~~~~~~~~~~~~l~~~~~-~~-~~v~V~R-~g~~~~I~s~~LvpGDiV~i~~ge~d~~~~~~vPaD~ill~G~~~VdES 310 (784)
....+++.|+.++++++.. .| ..++|+| ||++++|++++|+|||+|.+++|+ +|||||++++|++.||||
T Consensus 82 ~~e~~ae~ra~~~~~~L~~~~~~~~a~vlr~dg~~~~V~~~~L~~GDiV~V~~Gd-------~IPaDG~vieG~~~VDES 154 (675)
T TIGR01497 82 FAEAVAEGRGKAQADSLKGTKKTTFAKLLRDDGAIDKVPADQLKKGDIVLVEAGD-------VIPCDGEVIEGVASVDES 154 (675)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCceEEEEeeCCEEEEEEHHHCCCCCEEEECCCC-------EEeeeEEEEEccEEEEcc
Confidence 3344555555555555544 33 3578886 899999999999999999999887 999999999999999999
Q ss_pred CCCCCCcceeeccccCCCCccccccccCCCeeEEeeeeEeecCCCCCcCCCCCCCceEEEEEeeccccchhHHHHHhccc
Q 003952 311 ILTGESTPQWKVSIMGRETGEKLSARRDKSHVLFGGTKILQHTPDKTFPLKTPDGGCLAVVLRTGFETSQGKLMRTILFS 390 (784)
Q Consensus 311 ~LTGES~Pv~K~~~~~~~~~~~~~~~~~~~~~lf~GT~v~~~~~~~~~~~~~~~g~~~~~V~~TG~~T~~gkl~~~i~~~ 390 (784)
+|||||.|+.|++-. ..+.+|+||.+. +|.+.++|+++|.+|..||+++++..+
T Consensus 155 aLTGES~PV~K~~g~-------------~~~~V~aGT~v~-------------~G~~~i~Vt~~g~~S~lgri~~lve~a 208 (675)
T TIGR01497 155 AITGESAPVIKESGG-------------DFASVTGGTRIL-------------SDWLVVECTANPGETFLDRMIALVEGA 208 (675)
T ss_pred cccCCCCceeecCCC-------------CcceeecCcEEE-------------eeEEEEEEEEecccCHHHHHHHHHHhc
Confidence 999999999998611 112399999999 899999999999999999999999887
Q ss_pred ccccccchhHHHHHHHHHHHHH-HHHhhheeecCcCCccchhHHHHHHHHhhhhcccCCcchHHHHHHHHHHHHHHHhcC
Q 003952 391 TERVTANSWESGLFILFLVVFA-VIAAGYVLKKGMEDPTRSKYKLFLSCSLIITSVIPPELPMELSIAVNTSLIALARRG 469 (784)
Q Consensus 391 ~~~~~~~~~~~~~fi~~ll~~a-ii~~~~~~~~~~~~~~~~~~~~~l~~i~ii~~~vP~~Lp~~lslav~~s~~~l~k~~ 469 (784)
+.++++++.....+..++.++. ++.+.++....+. .. ...+...+.+++++||++|+..++.....++.+++|+|
T Consensus 209 ~~~ktplq~~l~~l~~~l~~v~li~~~~~~~~~~~~--~~--~~~~~~lvallV~aiP~aLg~l~~av~iag~~r~ar~g 284 (675)
T TIGR01497 209 QRRKTPNEIALTILLIALTLVFLLVTATLWPFAAYG--GN--AISVTVLVALLVCLIPTTIGGLLSAIGIAGMDRVLGFN 284 (675)
T ss_pred ccCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc--Ch--hHHHHHHHHHHHHhCchhhhhHHHHHHHHHHHHHHHCC
Confidence 7777877654433332222211 1111111111111 11 11344457778889999888777777678999999999
Q ss_pred ceecCCCCcCcCCceeEEEecccCcccCCceEEEEEEecCCCccccCCCCCcHHHHHHHHhccceEeeCCcccCCHHHHH
Q 003952 470 IFCTEPFRIPFAGKVDMCCFDKTGTLTSDDMEFRGVVGLSNAELEDDMTKVPVRTQEILASCHALVFVDNKLVGDPLEKA 549 (784)
Q Consensus 470 I~~~~~~~ie~lG~vd~icfDKTGTLT~~~m~v~~i~~~~~~~~~~~~~~~~~~~~~~la~chsl~~~~~~~~gdple~A 549 (784)
+++|++..+|.+|++|++|||||||||+|+|.+..+...++. ...+.....+.|... ..||+++|
T Consensus 285 vLvK~~~avE~lg~v~~I~~DKTGTLT~g~~~v~~~~~~~~~--------~~~~ll~~aa~~~~~-------s~hP~a~A 349 (675)
T TIGR01497 285 VIATSGRAVEACGDVDTLLLDKTGTITLGNRLASEFIPAQGV--------DEKTLADAAQLASLA-------DDTPEGKS 349 (675)
T ss_pred eEeeCcHHHHHhhCCCEEEECCCCcccCCCeEEEEEEecCCC--------cHHHHHHHHHHhcCC-------CCCcHHHH
Confidence 999999999999999999999999999999999998764331 011223333344322 36899999
Q ss_pred HHhccCccccCCCccccCCCCCcceeEEEEEccCCCCCeeEEEEEECCEEEEEEeCchHHHHHhhc----cCchhHHHHH
Q 003952 550 ALKGIDWSYKSDEKAMPKRGGGNAVQIVQRHHFASHLKRMSVVVRVQEEFFAFVKGAPETIQDRLT----DLPSSYIETY 625 (784)
Q Consensus 550 ll~~~~~~~~~~~~~~~~~~~~~~~~il~~~~Fss~~krmsviv~~~~~~~~~~KGapE~I~~~~~----~~p~~~~~~~ 625 (784)
+++++.. ...+.. ....+..+..||++.+++|++... ++ ..++|||||.+.+.|. ..|.++++.+
T Consensus 350 iv~~a~~-~~~~~~-------~~~~~~~~~~pf~~~~~~sg~~~~-~g--~~~~kGa~e~i~~~~~~~g~~~~~~~~~~~ 418 (675)
T TIGR01497 350 IVILAKQ-LGIRED-------DVQSLHATFVEFTAQTRMSGINLD-NG--RMIRKGAVDAIKRHVEANGGHIPTDLDQAV 418 (675)
T ss_pred HHHHHHH-cCCCcc-------ccccccceEEEEcCCCcEEEEEEe-CC--eEEEECCHHHHHHHHHhcCCCCcHHHHHHH
Confidence 9987531 100000 011234567899999777665432 34 3789999999988873 3577888889
Q ss_pred HHHhhccCeEEEEEEEeCCCCChhhHhhhhhhhccCCcEEEEEEeecCCCCcchHHHHHHHhhCCCcEEEEcCCCHHHHH
Q 003952 626 KKYTHQGSRVLALAFKSLPDMTVSDARSLHRDEVENGLTFAGFAVFNCPIREDSAKILSELKNSSQDLAMITGDQALTAC 705 (784)
Q Consensus 626 ~~~~~~G~Rvlala~k~l~~~~~~~~~~~~r~~~E~~l~flG~l~~~d~lr~da~~~I~~L~~agi~v~MITGDn~~TA~ 705 (784)
++++++|.|++++|+ |.+++|+++++||+|||++++|++||++|++++|+||||+.||.
T Consensus 419 ~~~a~~G~r~l~va~---------------------~~~~lG~i~l~D~~Rp~a~eaI~~l~~~Gi~v~miTGD~~~ta~ 477 (675)
T TIGR01497 419 DQVARQGGTPLVVCE---------------------DNRIYGVIYLKDIVKGGIKERFAQLRKMGIKTIMITGDNRLTAA 477 (675)
T ss_pred HHHHhCCCeEEEEEE---------------------CCEEEEEEEecccchhHHHHHHHHHHHCCCEEEEEcCCCHHHHH
Confidence 999999999999994 46899999999999999999999999999999999999999999
Q ss_pred HHHHHcccccCCcEEEecCCCCCeeEEeCCCcccccccchhhhhccCCCe-eEEEechhHHHH
Q 003952 706 YVASQVHIVTKPVLILCPVKNGKVYEWVSPDETEKIQYSEKEVEGLTDAH-DLCIGGDCFEML 767 (784)
Q Consensus 706 ~VA~~~gI~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~l~~tGd~l~~l 767 (784)
++|+++||.+....+.+ ++ |...++++++++ .++|+|||.|+.
T Consensus 478 ~iA~~lGI~~v~a~~~P-------------ed------K~~~v~~lq~~g~~VamvGDG~NDa 521 (675)
T TIGR01497 478 AIAAEAGVDDFIAEATP-------------ED------KIALIRQEQAEGKLVAMTGDGTNDA 521 (675)
T ss_pred HHHHHcCCCEEEcCCCH-------------HH------HHHHHHHHHHcCCeEEEECCCcchH
Confidence 99999999632221111 11 334455565554 499999999987
No 21
>KOG0205 consensus Plasma membrane H+-transporting ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.5e-63 Score=537.63 Aligned_cols=543 Identities=22% Similarity=0.266 Sum_probs=390.8
Q ss_pred CCCCchhhhhhhhcCCCCCHHHHHHHHhcCCCCccCCCCccHHHHHHHHhhhhH-HHHHHHhhhhcccc------hhhhh
Q 003952 149 PYPTKETFGYYLKCTGHSTEAKIAVATEKWGRNVFEYPQPTFQKLMKENCMEPF-FVFQVFCVGLWCLD------EYWYY 221 (784)
Q Consensus 149 ~~~~~~~~~~~~~~~g~l~~~~v~~~~~~yG~N~~~~~~~s~~~ll~~~~~~pf-~vfqi~~~~lw~l~------~y~~~ 221 (784)
..|.++.++++..++-||+++|+++|+++||+|+++.++.+-+.-|..-+.+|. ++++..++....+. .-|..
T Consensus 20 ~~p~eeVfeeL~~t~~GLt~~E~~eRlk~fG~NkleEkken~~lKFl~Fm~~PlswVMEaAAimA~~Lang~~~~~DW~D 99 (942)
T KOG0205|consen 20 AIPIEEVFEELLCTREGLTSDEVEERLKIFGPNKLEEKKESKFLKFLGFMWNPLSWVMEAAAIMAIGLANGGGRPPDWQD 99 (942)
T ss_pred cCchhhhHHHHhcCCCCCchHHHHHHHHhhCchhhhhhhhhHHHHHHHHHhchHHHHHHHHHHHHHHHhcCCCCCcchhh
Confidence 456778899988887788999999999999999999777554444445567787 67777665443332 12322
Q ss_pred HHHHHHHHHHHHHHHH-HHH---HHHHHHHHhhhhCCceEEEEEcCeEEEeecCCCCCCcEEEEcCCCCCCCCCCeecce
Q 003952 222 SLFTLFMLFMFESTMA-KSR---LKTLTEIRRVRVDNQTIMVHRCGKWVKLAGTDLVPGDVVSIGRSSGQTGEDKSVPAD 297 (784)
Q Consensus 222 ~~~~l~~l~~~~~~~~-~~~---~~~~~~l~~~~~~~~~v~V~R~g~~~~I~s~~LvpGDiV~i~~ge~d~~~~~~vPaD 297 (784)
-..+.. ++++.++.. .+. -....+|++- -..+..|+|||+|.++.+++||||||++|+.|+ +||||
T Consensus 100 F~gI~~-LLliNsti~FveE~nAGn~aa~L~a~--LA~KakVlRDGkw~E~eAs~lVPGDIlsik~Gd-------IiPaD 169 (942)
T KOG0205|consen 100 FVGICC-LLLINSTISFIEENNAGNAAAALMAG--LAPKAKVLRDGKWSEQEASILVPGDILSIKLGD-------IIPAD 169 (942)
T ss_pred hhhhhe-eeeecceeeeeeccccchHHHHHHhc--cCcccEEeecCeeeeeeccccccCceeeeccCC-------EecCc
Confidence 222222 222333332 222 2333344332 234678999999999999999999999999665 99999
Q ss_pred eeEeeCe-eEeeccCCCCCCcceeeccccCCCCccccccccCCCeeEEeeeeEeecCCCCCcCCCCCCCceEEEEEeecc
Q 003952 298 MLILGGS-AIVNEAILTGESTPQWKVSIMGRETGEKLSARRDKSHVLFGGTKILQHTPDKTFPLKTPDGGCLAVVLRTGF 376 (784)
Q Consensus 298 ~ill~G~-~~VdES~LTGES~Pv~K~~~~~~~~~~~~~~~~~~~~~lf~GT~v~~~~~~~~~~~~~~~g~~~~~V~~TG~ 376 (784)
++|++|+ +.||+|.|||||.|+.|.+ ++.+|+||+|. .|++.++|++||.
T Consensus 170 aRLl~gD~LkiDQSAlTGESLpvtKh~----------------gd~vfSgSTcK-------------qGE~eaVViATg~ 220 (942)
T KOG0205|consen 170 ARLLEGDPLKIDQSALTGESLPVTKHP----------------GDEVFSGSTCK-------------QGEIEAVVIATGV 220 (942)
T ss_pred cceecCCccccchhhhcCCccccccCC----------------CCceecccccc-------------cceEEEEEEEecc
Confidence 9999998 7899999999999999986 88999999999 6999999999999
Q ss_pred ccchhHHHHHhcccccccccchhH---HHHHHHHHHHHHHHHhhheeecCcCCccchhHHHHHHHHhh-hhcccCCcchH
Q 003952 377 ETSQGKLMRTILFSTERVTANSWE---SGLFILFLVVFAVIAAGYVLKKGMEDPTRSKYKLFLSCSLI-ITSVIPPELPM 452 (784)
Q Consensus 377 ~T~~gkl~~~i~~~~~~~~~~~~~---~~~fi~~ll~~aii~~~~~~~~~~~~~~~~~~~~~l~~i~i-i~~~vP~~Lp~ 452 (784)
+|..||....+.. ....--+++. ...|.+.++++.+++- |...... .+..++....-+++ ++.-||.++|.
T Consensus 221 ~TF~GkAA~LVds-t~~~GHFqkVLt~IGn~ci~si~~g~lie-~~vmy~~---q~R~~r~~i~nLlvllIGgiPiamPt 295 (942)
T KOG0205|consen 221 HTFFGKAAHLVDS-TNQVGHFQKVLTGIGNFCICSIALGMLIE-ITVMYPI---QHRLYRDGIDNLLVLLIGGIPIAMPT 295 (942)
T ss_pred ceeehhhHHhhcC-CCCcccHHHHHHhhhhHHHHHHHHHHHHH-HHhhhhh---hhhhhhhhhhheheeeecccccccce
Confidence 9999999988765 3332222322 1222222222222111 1111111 12233444444444 34449999999
Q ss_pred HHHHHHHHHHHHHHhcCceecCCCCcCcCCceeEEEecccCcccCCceEEEE--EEecCCCccccCCCCCcHHHHHHHHh
Q 003952 453 ELSIAVNTSLIALARRGIFCTEPFRIPFAGKVDMCCFDKTGTLTSDDMEFRG--VVGLSNAELEDDMTKVPVRTQEILAS 530 (784)
Q Consensus 453 ~lslav~~s~~~l~k~~I~~~~~~~ie~lG~vd~icfDKTGTLT~~~m~v~~--i~~~~~~~~~~~~~~~~~~~~~~la~ 530 (784)
.++..++.+..+|+|+|.+.+...+||.++.+|++|.|||||||.|++.+.. +... .+....+...++|+
T Consensus 296 VlsvTMAiGs~rLaqqgAItkrmtAIEemAGmdVLCSDKTGTLTlNkLSvdknl~ev~--------v~gv~~D~~~L~A~ 367 (942)
T KOG0205|consen 296 VLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEVF--------VKGVDKDDVLLTAA 367 (942)
T ss_pred eeeehhhHHHHHHHhcccHHHHHHHHHHhhCceEEeecCcCceeecceecCcCcceee--------ecCCChHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999876 3111 11222344444444
Q ss_pred ccceEeeCCcccCCHHHHHHHhccCccccCCCccccCCCCCcceeEEEEEccCCCCCeeEEEEEE-CCEEEEEEeCchHH
Q 003952 531 CHALVFVDNKLVGDPLEKAALKGIDWSYKSDEKAMPKRGGGNAVQIVQRHHFASHLKRMSVVVRV-QEEFFAFVKGAPET 609 (784)
Q Consensus 531 chsl~~~~~~~~gdple~All~~~~~~~~~~~~~~~~~~~~~~~~il~~~~Fss~~krmsviv~~-~~~~~~~~KGapE~ 609 (784)
-.| ..+| -|.+|+|++..+.- | +.....++.++-+||++..||.+..+.. +++.+..+|||||.
T Consensus 368 rAs--r~en---~DAID~A~v~~L~d---------P-Keara~ikevhF~PFnPV~Krta~ty~d~dG~~~r~sKGAPeq 432 (942)
T KOG0205|consen 368 RAS--RKEN---QDAIDAAIVGMLAD---------P-KEARAGIKEVHFLPFNPVDKRTALTYIDPDGNWHRVSKGAPEQ 432 (942)
T ss_pred HHh--hhcC---hhhHHHHHHHhhcC---------H-HHHhhCceEEeeccCCccccceEEEEECCCCCEEEecCCChHH
Confidence 333 2333 48999999988741 1 1223568999999999999998766655 45778999999999
Q ss_pred HHHhh---ccCchhHHHHHHHHhhccCeEEEEEEEeCCCCChhhHhhhhhhhccCCcEEEEEEeecCCCCcchHHHHHHH
Q 003952 610 IQDRL---TDLPSSYIETYKKYTHQGSRVLALAFKSLPDMTVSDARSLHRDEVENGLTFAGFAVFNCPIREDSAKILSEL 686 (784)
Q Consensus 610 I~~~~---~~~p~~~~~~~~~~~~~G~Rvlala~k~l~~~~~~~~~~~~r~~~E~~l~flG~l~~~d~lr~da~~~I~~L 686 (784)
|.+.| .++|+..++.+++|+.+|+|-+++|++..++... +.-.....|+|++-+-||+|.|+.++|+.-
T Consensus 433 il~l~~~~~~i~~~vh~~id~~AeRGlRSLgVArq~v~e~~~--------~~~g~pw~~~gllp~fdpprhdsa~tirra 504 (942)
T KOG0205|consen 433 ILKLCNEDHDIPERVHSIIDKFAERGLRSLAVARQEVPEKTK--------ESPGGPWEFVGLLPLFDPPRHDSAETIRRA 504 (942)
T ss_pred HHHHhhccCcchHHHHHHHHHHHHhcchhhhhhhhccccccc--------cCCCCCcccccccccCCCCccchHHHHHHH
Confidence 99999 4689999999999999999999999998875432 223466899999999999999999999999
Q ss_pred hhCCCcEEEEcCCCHHHHHHHHHHcccccC---CcEEEecCCCCCeeEEeCCCccc------c--cc-cchhhhhccCCC
Q 003952 687 KNSSQDLAMITGDQALTACYVASQVHIVTK---PVLILCPVKNGKVYEWVSPDETE------K--IQ-YSEKEVEGLTDA 754 (784)
Q Consensus 687 ~~agi~v~MITGDn~~TA~~VA~~~gI~~~---~~~il~~~~~~~~~~~~~~~~~~------~--~~-~~~~~~~~l~~~ 754 (784)
.+.|.+|.|+|||...-|...+|++|+-.. ....++.. +++...-.+.++.. . .| .+...++.+|++
T Consensus 505 l~lGv~VkmitgdqlaI~keTgrrlgmgtnmypss~llG~~-~~~~~~~~~v~elie~adgfAgVfpehKy~iV~~Lq~r 583 (942)
T KOG0205|consen 505 LNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGLG-KDGSMPGSPVDELIEKADGFAGVFPEHKYEIVKILQER 583 (942)
T ss_pred HhccceeeeecchHHHHHHhhhhhhccccCcCCchhhccCC-CCCCCCCCcHHHHhhhccCccccCHHHHHHHHHHHhhc
Confidence 999999999999999999999999999732 12333222 12222222222211 0 01 133456788887
Q ss_pred eeEE-EechhHHHH
Q 003952 755 HDLC-IGGDCFEML 767 (784)
Q Consensus 755 ~~l~-~tGd~l~~l 767 (784)
.++| |||||.|..
T Consensus 584 ~hi~gmtgdgvnda 597 (942)
T KOG0205|consen 584 KHIVGMTGDGVNDA 597 (942)
T ss_pred CceecccCCCcccc
Confidence 6654 999999875
No 22
>COG2217 ZntA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=4.1e-60 Score=548.02 Aligned_cols=432 Identities=24% Similarity=0.278 Sum_probs=353.2
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh-CCceEEEEE-cCeEEEeecCCCCCCcEEEEcCCCCCCCCCCeecc
Q 003952 219 WYYSLFTLFMLFMFESTMAKSRLKTLTEIRRVRV-DNQTIMVHR-CGKWVKLAGTDLVPGDVVSIGRSSGQTGEDKSVPA 296 (784)
Q Consensus 219 ~~~~~~~l~~l~~~~~~~~~~~~~~~~~l~~~~~-~~~~v~V~R-~g~~~~I~s~~LvpGDiV~i~~ge~d~~~~~~vPa 296 (784)
|..+.++++++.+.+....+.+.|+.+.++++.. .|..+++++ ||++++|+.+||.|||+|.|+||| +||+
T Consensus 174 f~~aa~ii~l~~~G~~LE~~a~~ra~~ai~~L~~l~p~~A~~~~~~~~~~~v~v~~v~~GD~v~VrpGE-------~IPv 246 (713)
T COG2217 174 FEEAAMLIFLFLLGRYLEARAKGRARRAIRALLDLAPKTATVVRGDGEEEEVPVEEVQVGDIVLVRPGE-------RIPV 246 (713)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCEEEEEecCCcEEEEEHHHCCCCCEEEECCCC-------EecC
Confidence 3455556666666777777777788888888766 789998887 555999999999999999999998 9999
Q ss_pred eeeEeeCeeEeeccCCCCCCcceeeccccCCCCccccccccCCCeeEEeeeeEeecCCCCCcCCCCCCCceEEEEEeecc
Q 003952 297 DMLILGGSAIVNEAILTGESTPQWKVSIMGRETGEKLSARRDKSHVLFGGTKILQHTPDKTFPLKTPDGGCLAVVLRTGF 376 (784)
Q Consensus 297 D~ill~G~~~VdES~LTGES~Pv~K~~~~~~~~~~~~~~~~~~~~~lf~GT~v~~~~~~~~~~~~~~~g~~~~~V~~TG~ 376 (784)
||++++|+..||||+|||||+|+.|.+ ++.+|+||.+. +|.....|+++|.
T Consensus 247 DG~V~~G~s~vDeS~iTGEs~PV~k~~----------------Gd~V~aGtiN~-------------~G~l~i~vt~~~~ 297 (713)
T COG2217 247 DGVVVSGSSSVDESMLTGESLPVEKKP----------------GDEVFAGTVNL-------------DGSLTIRVTRVGA 297 (713)
T ss_pred CeEEEeCcEEeecchhhCCCCCEecCC----------------CCEEeeeEEEC-------------CccEEEEEEecCc
Confidence 999999999999999999999999986 89999999999 8999999999999
Q ss_pred ccchhHHHHHhcccccccccc----hhHHHHHHHHHHHHHHHHhhheeecCcCCccchhHHHHHHHHhhhhcccCCcchH
Q 003952 377 ETSQGKLMRTILFSTERVTAN----SWESGLFILFLVVFAVIAAGYVLKKGMEDPTRSKYKLFLSCSLIITSVIPPELPM 452 (784)
Q Consensus 377 ~T~~gkl~~~i~~~~~~~~~~----~~~~~~fi~~ll~~aii~~~~~~~~~~~~~~~~~~~~~l~~i~ii~~~vP~~Lp~ 452 (784)
+|..+++++++..++.++.+. ++.+.+|++..++++++++..|+..+- .++...+..++.++++.|||+|-+
T Consensus 298 dt~la~Ii~LVe~Aq~~Ka~iqrlaDr~a~~fvp~vl~ia~l~f~~w~~~~~----~~~~~a~~~a~avLVIaCPCALgL 373 (713)
T COG2217 298 DTTLARIIRLVEEAQSSKAPIQRLADRVASYFVPVVLVIAALTFALWPLFGG----GDWETALYRALAVLVIACPCALGL 373 (713)
T ss_pred cCHHHHHHHHHHHHhhCCchHHHHHHHHHHccHHHHHHHHHHHHHHHHHhcC----CcHHHHHHHHHhheeeeCccHHHh
Confidence 999999999999888877664 445667888777777776665444331 235567889999999999999999
Q ss_pred HHHHHHHHHHHHHHhcCceecCCCCcCcCCceeEEEecccCcccCCceEEEEEEecCCCccccCCCCCcHHHHHHHHhcc
Q 003952 453 ELSIAVNTSLIALARRGIFCTEPFRIPFAGKVDMCCFDKTGTLTSDDMEFRGVVGLSNAELEDDMTKVPVRTQEILASCH 532 (784)
Q Consensus 453 ~lslav~~s~~~l~k~~I~~~~~~~ie~lG~vd~icfDKTGTLT~~~m~v~~i~~~~~~~~~~~~~~~~~~~~~~la~ch 532 (784)
+.++++..++.+.+|+||++|++..+|.++++|+++||||||||+|++.|..+...+++ ...+|+...
T Consensus 374 AtP~ai~~g~g~aA~~GILiK~g~~LE~l~~v~tvvFDKTGTLT~G~p~v~~v~~~~~~------------e~~~L~laA 441 (713)
T COG2217 374 ATPTAILVGIGRAARRGILIKGGEALERLAKVDTVVFDKTGTLTEGKPEVTDVVALDGD------------EDELLALAA 441 (713)
T ss_pred HHHHHHHHHHHHHHhCceEEeChHHHHhhccCCEEEEeCCCCCcCCceEEEEEecCCCC------------HHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999876431 112333333
Q ss_pred ceEeeCCcccCCHHHHHHHhccCccccCCCccccCCCCCcceeEEEEEccCCCCCeeEEEEEECCEEEEEEeCchHHHHH
Q 003952 533 ALVFVDNKLVGDPLEKAALKGIDWSYKSDEKAMPKRGGGNAVQIVQRHHFASHLKRMSVVVRVQEEFFAFVKGAPETIQD 612 (784)
Q Consensus 533 sl~~~~~~~~gdple~All~~~~~~~~~~~~~~~~~~~~~~~~il~~~~Fss~~krmsviv~~~~~~~~~~KGapE~I~~ 612 (784)
+++ ..+.||+.+|+++++.-.- . ...+..+..| ..++....+++ .+..|+++.+.+
T Consensus 442 alE----~~S~HPiA~AIv~~a~~~~-----~-------~~~~~~~~i~------G~Gv~~~v~g~--~v~vG~~~~~~~ 497 (713)
T COG2217 442 ALE----QHSEHPLAKAIVKAAAERG-----L-------PDVEDFEEIP------GRGVEAEVDGE--RVLVGNARLLGE 497 (713)
T ss_pred HHH----hcCCChHHHHHHHHHHhcC-----C-------CCccceeeec------cCcEEEEECCE--EEEEcCHHHHhh
Confidence 333 2357999999998653110 0 0011111111 34677777775 777899999987
Q ss_pred hhccCchhHHHHHHHHhhccCeEEEEEEEeCCCCChhhHhhhhhhhccCCcEEEEEEeecCCCCcchHHHHHHHhhCCCc
Q 003952 613 RLTDLPSSYIETYKKYTHQGSRVLALAFKSLPDMTVSDARSLHRDEVENGLTFAGFAVFNCPIREDSAKILSELKNSSQD 692 (784)
Q Consensus 613 ~~~~~p~~~~~~~~~~~~~G~Rvlala~k~l~~~~~~~~~~~~r~~~E~~l~flG~l~~~d~lr~da~~~I~~L~~agi~ 692 (784)
.-...+. ..+..+.+..+|..++.++ .|.+++|++.++|++|||++++|+.||+.|++
T Consensus 498 ~~~~~~~-~~~~~~~~~~~G~t~v~va---------------------~dg~~~g~i~~~D~~R~~a~~aI~~L~~~Gi~ 555 (713)
T COG2217 498 EGIDLPL-LSERIEALESEGKTVVFVA---------------------VDGKLVGVIALADELRPDAKEAIAALKALGIK 555 (713)
T ss_pred cCCCccc-hhhhHHHHHhcCCeEEEEE---------------------ECCEEEEEEEEeCCCChhHHHHHHHHHHCCCe
Confidence 6555554 6677888999999999988 46699999999999999999999999999999
Q ss_pred EEEEcCCCHHHHHHHHHHcccccCCcEEEecCCCCCeeEEeCCCcccccccchhhhhccCCCe-eEEEechhHHHH
Q 003952 693 LAMITGDQALTACYVASQVHIVTKPVLILCPVKNGKVYEWVSPDETEKIQYSEKEVEGLTDAH-DLCIGGDCFEML 767 (784)
Q Consensus 693 v~MITGDn~~TA~~VA~~~gI~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~l~~tGd~l~~l 767 (784)
++|+||||..||.+||+++||.+....+++++ |.+.++++++++ .++|+|||+|+.
T Consensus 556 ~~mLTGDn~~~A~~iA~~lGId~v~AellPed-------------------K~~~V~~l~~~g~~VamVGDGINDA 612 (713)
T COG2217 556 VVMLTGDNRRTAEAIAKELGIDEVRAELLPED-------------------KAEIVRELQAEGRKVAMVGDGINDA 612 (713)
T ss_pred EEEEcCCCHHHHHHHHHHcChHhheccCCcHH-------------------HHHHHHHHHhcCCEEEEEeCCchhH
Confidence 99999999999999999999987777777544 556677887665 599999999986
No 23
>KOG0203 consensus Na+/K+ ATPase, alpha subunit [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.4e-61 Score=539.22 Aligned_cols=533 Identities=21% Similarity=0.252 Sum_probs=404.3
Q ss_pred CCchhhhhhhhcC-CCCCHHHHHHHHhcCCCCccCCCCc-cHHHHHHHHhhhhHHHHHHHhhhhcccchh----------
Q 003952 151 PTKETFGYYLKCT-GHSTEAKIAVATEKWGRNVFEYPQP-TFQKLMKENCMEPFFVFQVFCVGLWCLDEY---------- 218 (784)
Q Consensus 151 ~~~~~~~~~~~~~-g~l~~~~v~~~~~~yG~N~~~~~~~-s~~~ll~~~~~~pf~vfqi~~~~lw~l~~y---------- 218 (784)
|.++..+.|..+. .|++.+++.+++.+-|+|.+..|+. +=|..|.++++.-|-+....+.++.++..+
T Consensus 43 ~~~eL~~r~~t~~~~Glt~~~A~~~L~rdG~NaL~Ppk~t~~wikf~kq~f~~~~ill~~~a~l~~~~y~~~~s~~~~~~ 122 (1019)
T KOG0203|consen 43 SVDELCERYGTSVSQGLTSQEAAEKLARDGPNALTPPKTTPEWIKFLRQLFGGFSILLWIGAILCFVAYGIQASTEDDPS 122 (1019)
T ss_pred CHHHHHHHhcCChhhcccHHHHHhhhccCCCCCCCCCCCChHHHHHHHHHhhhHHHHHHHHHHHHHHHHhhhcccCCCCC
Confidence 4556677776653 4568889999999999999999875 456667888888776655544444322111
Q ss_pred ---hhhHHHHHHHHHHHHHHHHHHHHHH---HHHHHhhhhCCceEEEEEcCeEEEeecCCCCCCcEEEEcCCCCCCCCCC
Q 003952 219 ---WYYSLFTLFMLFMFESTMAKSRLKT---LTEIRRVRVDNQTIMVHRCGKWVKLAGTDLVPGDVVSIGRSSGQTGEDK 292 (784)
Q Consensus 219 ---~~~~~~~l~~l~~~~~~~~~~~~~~---~~~l~~~~~~~~~v~V~R~g~~~~I~s~~LvpGDiV~i~~ge~d~~~~~ 292 (784)
.|.++++....++......+|..+. +..+++|. |..++|+|||....+.++|||+||+|.++-|+
T Consensus 123 ~~nly~giiL~~vv~vtg~~~~~qe~ks~~im~sF~~l~--P~~~~ViRdg~k~~i~~eelVvGD~v~vk~Gd------- 193 (1019)
T KOG0203|consen 123 DDNLYLGIVLAAVVIVTGLFSYYQEAKSSKIMDSFKNLV--PQQALVIRDGEKMTINAEELVVGDLVEVKGGD------- 193 (1019)
T ss_pred CcceEEEEEEEEEEEEEecCCCccchhhHHHHHHHhccc--hhhheeeecceeEEechhhcccccceeeccCC-------
Confidence 1112222222222223334454443 44555554 88999999999999999999999999999766
Q ss_pred eecceeeEeeCe-eEeeccCCCCCCcceeeccccCCCCccccccccCCCeeEEeeeeEeecCCCCCcCCCCCCCceEEEE
Q 003952 293 SVPADMLILGGS-AIVNEAILTGESTPQWKVSIMGRETGEKLSARRDKSHVLFGGTKILQHTPDKTFPLKTPDGGCLAVV 371 (784)
Q Consensus 293 ~vPaD~ill~G~-~~VdES~LTGES~Pv~K~~~~~~~~~~~~~~~~~~~~~lf~GT~v~~~~~~~~~~~~~~~g~~~~~V 371 (784)
+||||.+++++. |.||+|.|||||.|+.+.+..... .++ ...|+-|.+|.++ +|.+.++|
T Consensus 194 rVPADiRiis~~g~~vdnsslTGesEP~~~~~~~t~~--~~~----Et~Ni~f~st~~v-------------eG~~~giv 254 (1019)
T KOG0203|consen 194 RVPADIRIISATGCKVDNSSLTGESEPQTRSPEFTHE--NPL----ETRNIAFFSTNCV-------------EGTGRGIV 254 (1019)
T ss_pred cccceeEEEEecceeEeccccccccCCccCCcccccc--Cch----hheeeeeeeeEEe-------------cceEEEEE
Confidence 999999999986 999999999999999998743221 112 3578999999999 99999999
Q ss_pred EeeccccchhHHHHHhcccccccccchhHHHHHHHHHHHHHHHHhhheeecCcCCccchhHHHHHHHHhhhhcccCCcch
Q 003952 372 LRTGFETSQGKLMRTILFSTERVTANSWESGLFILFLVVFAVIAAGYVLKKGMEDPTRSKYKLFLSCSLIITSVIPPELP 451 (784)
Q Consensus 372 ~~TG~~T~~gkl~~~i~~~~~~~~~~~~~~~~fi~~ll~~aii~~~~~~~~~~~~~~~~~~~~~l~~i~ii~~~vP~~Lp 451 (784)
++||.+|..|++......-....++..++...|+.++..+|+...+.++..+..- +..+...+...+.++++.+|++||
T Consensus 255 i~tGd~Tv~G~ia~l~~~~~~~~t~~~~ei~~fi~~it~vAi~~~i~fF~~~~~~-gy~~l~avv~~i~iivAnvPeGL~ 333 (1019)
T KOG0203|consen 255 IATGDRTVMGRIASLASGLEDGKTPIAKEIEHFIHIITGVAIFLGISFFILALIL-GYEWLRAVVFLIGIIVANVPEGLL 333 (1019)
T ss_pred EecCCceEEeehhhhhccCCCCCCcchhhhhchHHHHHHHHHHHHHHHHHHHHhh-cchhHHHhhhhheeEEecCcCCcc
Confidence 9999999999998876554556677888888888777777766544444222211 344566677788999999999999
Q ss_pred HHHHHHHHHHHHHHHhcCceecCCCCcCcCCceeEEEecccCcccCCceEEEEEEecCCC---ccccC--------CCCC
Q 003952 452 MELSIAVNTSLIALARRGIFCTEPFRIPFAGKVDMCCFDKTGTLTSDDMEFRGVVGLSNA---ELEDD--------MTKV 520 (784)
Q Consensus 452 ~~lslav~~s~~~l~k~~I~~~~~~~ie~lG~vd~icfDKTGTLT~~~m~v~~i~~~~~~---~~~~~--------~~~~ 520 (784)
..++..+....+||++++.++++..++|++|...++|.|||||||+|+|+|..++..+.- +...+ .+..
T Consensus 334 ~tvTv~LtltakrMa~Knc~vknLeavetlGsts~I~SDktGTlTqnrMtVahlw~d~~i~~~d~~~~~~~~~~~~~~~~ 413 (1019)
T KOG0203|consen 334 ATVTVCLTLTAKRMARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHLWFDNQIHEADTTEDQSGQSFDKSSAT 413 (1019)
T ss_pred ceehhhHHHHHHHHhhceeEEeeeeheeecccceeEeecceeeEEecceEEEeeccCCceeeeechhhhhcccccccCch
Confidence 999999999999999999999999999999999999999999999999999998854321 11000 0111
Q ss_pred cHHHHHHHHhccceEeeCCc---------ccCCHHHHHHHhccCccccCCCccccCCCCCcceeEEEEEccCCCCCeeEE
Q 003952 521 PVRTQEILASCHALVFVDNK---------LVGDPLEKAALKGIDWSYKSDEKAMPKRGGGNAVQIVQRHHFASHLKRMSV 591 (784)
Q Consensus 521 ~~~~~~~la~chsl~~~~~~---------~~gdple~All~~~~~~~~~~~~~~~~~~~~~~~~il~~~~Fss~~krmsv 591 (784)
-.....+...|+.+....|+ ..||+.|.|+++++...+.+-.. .+...+.+...||+|.+|..-.
T Consensus 414 ~~~l~r~~~lCn~a~~~~gq~dvPv~kk~v~G~~se~ALlk~~e~~~~~~~~------~R~~~~kv~eipfNSt~Kyqls 487 (1019)
T KOG0203|consen 414 FIALSRIATLCNRAVFKPGQDDVPVLKRDVAGDASEVALLKFIELILGSVME------LRERNPKVAEIPFNSTNKYQLS 487 (1019)
T ss_pred HHHHHHHHHHhCcceecccccCCceeeeeccCCHHHHHHHHHHHHhcchHHH------HHHhhHHhhcCCcccccceEEE
Confidence 23445677789999876654 47999999999998655443211 1133455677899999999877
Q ss_pred EEEECC----EEEEEEeCchHHHHHhhccC-------------chhHHHHHHHHhhccCeEEEEEEEeCCCCChhhHhhh
Q 003952 592 VVRVQE----EFFAFVKGAPETIQDRLTDL-------------PSSYIETYKKYTHQGSRVLALAFKSLPDMTVSDARSL 654 (784)
Q Consensus 592 iv~~~~----~~~~~~KGapE~I~~~~~~~-------------p~~~~~~~~~~~~~G~Rvlala~k~l~~~~~~~~~~~ 654 (784)
+...++ ++.+.+|||||.++++|+++ .+.+.+.+.++...|.||++++++.+++....+-...
T Consensus 488 ih~~~d~~~~~~~l~mKGape~il~~CSTi~i~g~e~pld~~~~~~f~~ay~~lg~~GerVlgF~~~~l~~~~~p~~~~f 567 (1019)
T KOG0203|consen 488 IHETEDPSDPRFLLVMKGAPERILDRCSTILINGEEKPLDEKLKEAFQEAYLELGGLGERVLGFCDLELPDEKFPRGFQF 567 (1019)
T ss_pred EEecCCCCCccceeeecCChHHHHhhccceeecCCCCCcCHHHHHHHHHHHHHhhhcchHHHHHHHHhcchhcCCCceEe
Confidence 777655 67889999999999999543 2457778899999999999999999875433221111
Q ss_pred hh---hhccCCcEEEEEEeecCCCCcchHHHHHHHhhCCCcEEEEcCCCHHHHHHHHHHcccccCCc
Q 003952 655 HR---DEVENGLTFAGFAVFNCPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPV 718 (784)
Q Consensus 655 ~r---~~~E~~l~flG~l~~~d~lr~da~~~I~~L~~agi~v~MITGDn~~TA~~VA~~~gI~~~~~ 718 (784)
+- ...-.+|.|+|++.+-||+|..+++++..||+|||+|+|+|||+|.||.++|+++||+....
T Consensus 568 ~~d~~n~p~~nl~FlGl~s~idPPR~~vP~Av~~CrsAGIkvimVTgdhpiTAkAiA~~vgIi~~~~ 634 (1019)
T KOG0203|consen 568 DTDDVNFPTDNLRFLGLISMIDPPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKSVGIISEGS 634 (1019)
T ss_pred ecCCCCCcchhccccchhhccCCCcccCchhhhhhhhhCceEEEEecCccchhhhhhhheeeecCCc
Confidence 11 12236899999999999999999999999999999999999999999999999999985433
No 24
>TIGR01494 ATPase_P-type ATPase, P-type (transporting), HAD superfamily, subfamily IC. The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily.
Probab=100.00 E-value=1.3e-58 Score=532.54 Aligned_cols=392 Identities=35% Similarity=0.538 Sum_probs=319.9
Q ss_pred HHHHHHHhhhhCCceEEEEEcCeEEEeecCCCCCCcEEEEcCCCCCCCCCCeecceeeEeeCeeEeeccCCCCCCcceee
Q 003952 242 KTLTEIRRVRVDNQTIMVHRCGKWVKLAGTDLVPGDVVSIGRSSGQTGEDKSVPADMLILGGSAIVNEAILTGESTPQWK 321 (784)
Q Consensus 242 ~~~~~l~~~~~~~~~v~V~R~g~~~~I~s~~LvpGDiV~i~~ge~d~~~~~~vPaD~ill~G~~~VdES~LTGES~Pv~K 321 (784)
+..+.++++..+|..++|+|+| |++|++++|+|||+|.+++|+ .|||||+|++|++.||||+|||||.|+.|
T Consensus 22 ~~~~~l~~~~~~~~~~~v~r~g-~~~V~~~~l~~GDiv~v~~G~-------~iP~Dg~vl~g~~~vdes~LTGEs~pv~k 93 (499)
T TIGR01494 22 DAIRSLKDLLVNPETVTVLRNG-WKEIPASDLVPGDIVLVKSGE-------IVPADGVLLSGSCFVDESNLTGESVPVLK 93 (499)
T ss_pred HHHHHHhhccCCCCeEEEEECC-eEEEEHHHCCCCCEEEECCCC-------EeeeeEEEEEccEEEEcccccCCCCCeee
Confidence 3444444433468899999999 999999999999999999887 99999999999999999999999999999
Q ss_pred ccccCCCCccccccccCCCeeEEeeeeEeecCCCCCcCCCCCCCceEEEEEeeccccchhHHHHHhccccccccc----c
Q 003952 322 VSIMGRETGEKLSARRDKSHVLFGGTKILQHTPDKTFPLKTPDGGCLAVVLRTGFETSQGKLMRTILFSTERVTA----N 397 (784)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~lf~GT~v~~~~~~~~~~~~~~~g~~~~~V~~TG~~T~~gkl~~~i~~~~~~~~~----~ 397 (784)
.+ ++.+|+||.+. +|.....|+++|.+|..|++...+....+.+++ .
T Consensus 94 ~~----------------g~~v~~gs~~~-------------~G~~~~~v~~~~~~s~~~~i~~~v~~~~~~k~~~~~~~ 144 (499)
T TIGR01494 94 TA----------------GDAVFAGTYVF-------------NGTLIVVVSATGPNTFGGKIAVVVYTGFETKTPLQPKL 144 (499)
T ss_pred cc----------------CCccccCcEEe-------------ccEEEEEEEEeccccHHHHHHHHHHhcCCCCCchHHHH
Confidence 86 67899999999 899999999999999999999988665553333 2
Q ss_pred hhHH-HHHHHHHHHHHHHHhhheeecCcCCccchhHHHHHHHHhhhhcccCCcchHHHHHHHHHHHHHHHhcCceecCCC
Q 003952 398 SWES-GLFILFLVVFAVIAAGYVLKKGMEDPTRSKYKLFLSCSLIITSVIPPELPMELSIAVNTSLIALARRGIFCTEPF 476 (784)
Q Consensus 398 ~~~~-~~fi~~ll~~aii~~~~~~~~~~~~~~~~~~~~~l~~i~ii~~~vP~~Lp~~lslav~~s~~~l~k~~I~~~~~~ 476 (784)
++.. .+|+.++++++++.+.+|+..... ..++...+..++.+++.++|++||++++++...+..+++|+||+++++.
T Consensus 145 ~~~~~~~~~~~~~~la~~~~~~~~~~~~~--~~~~~~~~~~~~~vl~~~~P~aL~~~~~~~~~~~~~~~~~~gilvk~~~ 222 (499)
T TIGR01494 145 DRLSDIIFILFVLLIALAVFLFWAIGLWD--PNSIFKIFLRALILLVIAIPIALPLAVTIALAVGDARLAKKGIVVRSLN 222 (499)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcc--cccHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHCCcEEechh
Confidence 2333 456666666666665555433211 1135677889999999999999999999999999999999999999999
Q ss_pred CcCcCCceeEEEecccCcccCCceEEEEEEecCCCccccCCCCCcHHHHHHHHhccceEeeCCcccCCHHHHHHHhccCc
Q 003952 477 RIPFAGKVDMCCFDKTGTLTSDDMEFRGVVGLSNAELEDDMTKVPVRTQEILASCHALVFVDNKLVGDPLEKAALKGIDW 556 (784)
Q Consensus 477 ~ie~lG~vd~icfDKTGTLT~~~m~v~~i~~~~~~~~~~~~~~~~~~~~~~la~chsl~~~~~~~~gdple~All~~~~~ 556 (784)
.+|.+|++|++|||||||||+|+|+|.++...+. ...++||+|+|+++++.+
T Consensus 223 ~lE~l~~v~~i~fDKTGTLT~~~~~v~~~~~~~~----------------------------~~~s~hp~~~ai~~~~~~ 274 (499)
T TIGR01494 223 ALEELGKVDYICSDKTGTLTKNEMSFKKVSVLGG----------------------------EYLSGHPDERALVKSAKW 274 (499)
T ss_pred hhhhccCCcEEEeeCCCccccCceEEEEEEecCC----------------------------CcCCCChHHHHHHHHhhh
Confidence 9999999999999999999999999999875321 123689999999998754
Q ss_pred cccCCCccccCCCCCcceeEEEEEccCCCCCeeEEEEEECCEEEEEEeCchHHHHHhhccCchhHHHHHHHHhhccCeEE
Q 003952 557 SYKSDEKAMPKRGGGNAVQIVQRHHFASHLKRMSVVVRVQEEFFAFVKGAPETIQDRLTDLPSSYIETYKKYTHQGSRVL 636 (784)
Q Consensus 557 ~~~~~~~~~~~~~~~~~~~il~~~~Fss~~krmsviv~~~~~~~~~~KGapE~I~~~~~~~p~~~~~~~~~~~~~G~Rvl 636 (784)
. .++.+||++..++|+++++.+++ .++||+||.+.+.|.. +.+..+.++++|+|++
T Consensus 275 ~------------------~~~~~~f~~~~~~~~~~~~~~~~--~~~~G~~~~i~~~~~~----~~~~~~~~~~~g~~~~ 330 (499)
T TIGR01494 275 K------------------ILNVFEFSSVRKRMSVIVRGPDG--TYVKGAPEFVLSRVKD----LEEKVKELAQSGLRVL 330 (499)
T ss_pred c------------------CcceeccCCCCceEEEEEecCCc--EEEeCCHHHHHHhhHH----HHHHHHHHHhCCCEEE
Confidence 1 12467999999999999986444 5789999999998853 4445567889999999
Q ss_pred EEEEEeCCCCChhhHhhhhhhhccCCcEEEEEEeecCCCCcchHHHHHHHhhCCCcEEEEcCCCHHHHHHHHHHcccccC
Q 003952 637 ALAFKSLPDMTVSDARSLHRDEVENGLTFAGFAVFNCPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTK 716 (784)
Q Consensus 637 ala~k~l~~~~~~~~~~~~r~~~E~~l~flG~l~~~d~lr~da~~~I~~L~~agi~v~MITGDn~~TA~~VA~~~gI~~~ 716 (784)
++|++ .+++|++.++|++|+|++++|+.|+++|++++|+|||++.||.++|+++||..
T Consensus 331 ~~a~~---------------------~~~~g~i~l~d~lr~~~~~~i~~l~~~gi~~~~ltGD~~~~a~~ia~~lgi~~- 388 (499)
T TIGR01494 331 AVASK---------------------ETLLGLLGLEDPLRDDAKETISELREAGIRVIMLTGDNVLTAKAIAKELGIFA- 388 (499)
T ss_pred EEEEC---------------------CeEEEEEEecCCCchhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCcee-
Confidence 99963 27999999999999999999999999999999999999999999999999821
Q ss_pred CcEEEecCCCCCeeEEeCCCcccccccchhhhhccCCC-eeEEEechhHHHH
Q 003952 717 PVLILCPVKNGKVYEWVSPDETEKIQYSEKEVEGLTDA-HDLCIGGDCFEML 767 (784)
Q Consensus 717 ~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~l~~tGd~l~~l 767 (784)
.+. | ++ +.+.+++++++ +.++|+|||+|+.
T Consensus 389 --~~~-p------------~~------K~~~v~~l~~~g~~v~~vGDg~nD~ 419 (499)
T TIGR01494 389 --RVT-P------------EE------KAALVEALQKKGRVVAMTGDGVNDA 419 (499)
T ss_pred --ccC-H------------HH------HHHHHHHHHHCCCEEEEECCChhhH
Confidence 111 1 11 22334445444 4599999999987
No 25
>PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional
Probab=100.00 E-value=8.9e-58 Score=543.30 Aligned_cols=427 Identities=21% Similarity=0.240 Sum_probs=336.6
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh-CCceEEEEEcCeEEEeecCCCCCCcEEEEcCCCCCCCCCCeeccee
Q 003952 220 YYSLFTLFMLFMFESTMAKSRLKTLTEIRRVRV-DNQTIMVHRCGKWVKLAGTDLVPGDVVSIGRSSGQTGEDKSVPADM 298 (784)
Q Consensus 220 ~~~~~~l~~l~~~~~~~~~~~~~~~~~l~~~~~-~~~~v~V~R~g~~~~I~s~~LvpGDiV~i~~ge~d~~~~~~vPaD~ 298 (784)
..+.++++++.+.+....+++.|+.+.++++.. .|.+++|+|||++++|++++|+|||+|.|++|+ +|||||
T Consensus 207 ~~a~~i~~l~~~g~~le~~~~~ra~~~~~~L~~l~p~~a~vir~g~~~~v~~~~l~~GDiv~v~~G~-------~IP~Dg 279 (741)
T PRK11033 207 AEAAMVLLLFLIGERLEGYAASRARRGVSALMALVPETATRLRDGEREEVAIADLRPGDVIEVAAGG-------RLPADG 279 (741)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEEECCEEEEEEHHHCCCCCEEEECCCC-------EEecce
Confidence 344555555555666666777777777776655 688999999999999999999999999999988 999999
Q ss_pred eEeeCeeEeeccCCCCCCcceeeccccCCCCccccccccCCCeeEEeeeeEeecCCCCCcCCCCCCCceEEEEEeecccc
Q 003952 299 LILGGSAIVNEAILTGESTPQWKVSIMGRETGEKLSARRDKSHVLFGGTKILQHTPDKTFPLKTPDGGCLAVVLRTGFET 378 (784)
Q Consensus 299 ill~G~~~VdES~LTGES~Pv~K~~~~~~~~~~~~~~~~~~~~~lf~GT~v~~~~~~~~~~~~~~~g~~~~~V~~TG~~T 378 (784)
+|++|++.||||+|||||.|+.|.+ ++.+|+||.+. +|.+.+.|+++|.+|
T Consensus 280 ~vi~g~~~vdes~lTGEs~Pv~k~~----------------Gd~V~aGt~~~-------------~G~~~i~V~~~g~~s 330 (741)
T PRK11033 280 KLLSPFASFDESALTGESIPVERAT----------------GEKVPAGATSV-------------DRLVTLEVLSEPGAS 330 (741)
T ss_pred EEEECcEEeecccccCCCCCEecCC----------------CCeeccCCEEc-------------CceEEEEEEeccccC
Confidence 9999999999999999999999985 88999999999 899999999999999
Q ss_pred chhHHHHHhcccccccccch----hHHHHHHHHHHHHHHHHhhheeecCcCCccchhHHHHHHHHhhhhcccCCcchHHH
Q 003952 379 SQGKLMRTILFSTERVTANS----WESGLFILFLVVFAVIAAGYVLKKGMEDPTRSKYKLFLSCSLIITSVIPPELPMEL 454 (784)
Q Consensus 379 ~~gkl~~~i~~~~~~~~~~~----~~~~~fi~~ll~~aii~~~~~~~~~~~~~~~~~~~~~l~~i~ii~~~vP~~Lp~~l 454 (784)
..||+++.+..++.++++.+ +.+.+|++++++++++.+.+|+... ...+...+..++.++++.|||+|.++.
T Consensus 331 ~l~~I~~lv~~a~~~k~~~q~~~d~~a~~~~~~v~~~a~~~~~~~~~~~----~~~~~~~i~~a~svlviacPcaL~lat 406 (741)
T PRK11033 331 AIDRILHLIEEAEERRAPIERFIDRFSRIYTPAIMLVALLVILVPPLLF----AAPWQEWIYRGLTLLLIGCPCALVIST 406 (741)
T ss_pred HHHHHHHHHHHhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc----cCCHHHHHHHHHHHHHHhchhhhhhhh
Confidence 99999999988777666544 4456677777777766655442211 123445677888899999999999999
Q ss_pred HHHHHHHHHHHHhcCceecCCCCcCcCCceeEEEecccCcccCCceEEEEEEecCCCccccCCCCCcHHHHHHHHhccce
Q 003952 455 SIAVNTSLIALARRGIFCTEPFRIPFAGKVDMCCFDKTGTLTSDDMEFRGVVGLSNAELEDDMTKVPVRTQEILASCHAL 534 (784)
Q Consensus 455 slav~~s~~~l~k~~I~~~~~~~ie~lG~vd~icfDKTGTLT~~~m~v~~i~~~~~~~~~~~~~~~~~~~~~~la~chsl 534 (784)
++++..++.+++|+||++|++..+|.++++|++|||||||||+|+|+|..+...++. ..+. ++..+.++
T Consensus 407 P~a~~~~l~~aar~gilik~~~alE~l~~v~~v~fDKTGTLT~g~~~v~~~~~~~~~---------~~~~--~l~~aa~~ 475 (741)
T PRK11033 407 PAAITSGLAAAARRGALIKGGAALEQLGRVTTVAFDKTGTLTEGKPQVTDIHPATGI---------SESE--LLALAAAV 475 (741)
T ss_pred HHHHHHHHHHHHHCCeEEcCcHHHHHhhCCCEEEEeCCCCCcCCceEEEEEEecCCC---------CHHH--HHHHHHHH
Confidence 999999999999999999999999999999999999999999999999998765431 1122 22222233
Q ss_pred EeeCCcccCCHHHHHHHhccCccccCCCccccCCCCCcceeEEEEEccCCCCCee---EEEEEECCEEEEEEeCchHHHH
Q 003952 535 VFVDNKLVGDPLEKAALKGIDWSYKSDEKAMPKRGGGNAVQIVQRHHFASHLKRM---SVVVRVQEEFFAFVKGAPETIQ 611 (784)
Q Consensus 535 ~~~~~~~~gdple~All~~~~~~~~~~~~~~~~~~~~~~~~il~~~~Fss~~krm---sviv~~~~~~~~~~KGapE~I~ 611 (784)
+ ..+.||+++|+++++... + . .+||.++.+.+ ++....+++ .+..|+|+.+.
T Consensus 476 e----~~s~hPia~Ai~~~a~~~-----------~----~----~~~~~~~~~~~~g~Gv~~~~~g~--~~~ig~~~~~~ 530 (741)
T PRK11033 476 E----QGSTHPLAQAIVREAQVR-----------G----L----AIPEAESQRALAGSGIEGQVNGE--RVLICAPGKLP 530 (741)
T ss_pred h----cCCCCHHHHHHHHHHHhc-----------C----C----CCCCCcceEEEeeEEEEEEECCE--EEEEecchhhh
Confidence 2 225799999999875310 0 0 13455555554 455555665 34569999986
Q ss_pred HhhccCchhHHHHHHHHhhccCeEEEEEEEeCCCCChhhHhhhhhhhccCCcEEEEEEeecCCCCcchHHHHHHHhhCCC
Q 003952 612 DRLTDLPSSYIETYKKYTHQGSRVLALAFKSLPDMTVSDARSLHRDEVENGLTFAGFAVFNCPIREDSAKILSELKNSSQ 691 (784)
Q Consensus 612 ~~~~~~p~~~~~~~~~~~~~G~Rvlala~k~l~~~~~~~~~~~~r~~~E~~l~flG~l~~~d~lr~da~~~I~~L~~agi 691 (784)
+ +.+++.+..+.+..+|+|++++|+ |.+++|++.|+|++|||++++|++|++.|+
T Consensus 531 ~----~~~~~~~~~~~~~~~g~~~v~va~---------------------~~~~~g~i~l~d~~r~~a~~~i~~L~~~gi 585 (741)
T PRK11033 531 P----LADAFAGQINELESAGKTVVLVLR---------------------NDDVLGLIALQDTLRADARQAISELKALGI 585 (741)
T ss_pred h----ccHHHHHHHHHHHhCCCEEEEEEE---------------------CCEEEEEEEEecCCchhHHHHHHHHHHCCC
Confidence 5 345566677889999999999994 568999999999999999999999999999
Q ss_pred cEEEEcCCCHHHHHHHHHHcccccCCcEEEecCCCCCeeEEeCCCcccccccchhhhhccCCCeeEEEechhHHHH
Q 003952 692 DLAMITGDQALTACYVASQVHIVTKPVLILCPVKNGKVYEWVSPDETEKIQYSEKEVEGLTDAHDLCIGGDCFEML 767 (784)
Q Consensus 692 ~v~MITGDn~~TA~~VA~~~gI~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~tGd~l~~l 767 (784)
+++|+||||..+|.++|+++||... ...+ +++ |...++++++++.++|+|||+|..
T Consensus 586 ~~~llTGd~~~~a~~ia~~lgi~~~-~~~~-------------p~~------K~~~v~~l~~~~~v~mvGDgiNDa 641 (741)
T PRK11033 586 KGVMLTGDNPRAAAAIAGELGIDFR-AGLL-------------PED------KVKAVTELNQHAPLAMVGDGINDA 641 (741)
T ss_pred EEEEEcCCCHHHHHHHHHHcCCCee-cCCC-------------HHH------HHHHHHHHhcCCCEEEEECCHHhH
Confidence 9999999999999999999999521 1111 111 444566676667899999999986
No 26
>TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase. This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512.
Probab=100.00 E-value=1.9e-56 Score=519.63 Aligned_cols=438 Identities=20% Similarity=0.241 Sum_probs=335.0
Q ss_pred hhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh-CCceEEEEEcC-eEEEeecCCCCCCcEEEEcCCCCCCCCCCee
Q 003952 217 EYWYYSLFTLFMLFMFESTMAKSRLKTLTEIRRVRV-DNQTIMVHRCG-KWVKLAGTDLVPGDVVSIGRSSGQTGEDKSV 294 (784)
Q Consensus 217 ~y~~~~~~~l~~l~~~~~~~~~~~~~~~~~l~~~~~-~~~~v~V~R~g-~~~~I~s~~LvpGDiV~i~~ge~d~~~~~~v 294 (784)
..|..+.++++++++......++++|+.+.++++.. .|..++|+|+| ++++|++++|+|||+|.+++|+ .|
T Consensus 16 ~~~~~~~~i~~~~~~~~~i~~~~~~~~~~~l~~l~~~~~~~~~v~r~~g~~~~i~~~~l~~GDiv~v~~G~-------~i 88 (556)
T TIGR01525 16 GLVLEGALLLFLFLLGETLEERAKGRASDALSALLALAPSTARVLQGDGSEEEVPVEELQVGDIVIVRPGE-------RI 88 (556)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEECCCeEEEEEHHHCCCCCEEEECCCC-------Ee
Confidence 445566777777777777778888888888888876 67889999996 9999999999999999999887 99
Q ss_pred cceeeEeeCeeEeeccCCCCCCcceeeccccCCCCccccccccCCCeeEEeeeeEeecCCCCCcCCCCCCCceEEEEEee
Q 003952 295 PADMLILGGSAIVNEAILTGESTPQWKVSIMGRETGEKLSARRDKSHVLFGGTKILQHTPDKTFPLKTPDGGCLAVVLRT 374 (784)
Q Consensus 295 PaD~ill~G~~~VdES~LTGES~Pv~K~~~~~~~~~~~~~~~~~~~~~lf~GT~v~~~~~~~~~~~~~~~g~~~~~V~~T 374 (784)
||||+|++|++.||||+|||||.|+.|.+ ++.+|+||.+. +|.+.++|++|
T Consensus 89 P~Dg~vi~g~~~vdes~lTGEs~pv~k~~----------------g~~v~aGt~v~-------------~g~~~~~v~~~ 139 (556)
T TIGR01525 89 PVDGVVISGESEVDESALTGESMPVEKKE----------------GDEVFAGTING-------------DGSLTIRVTKL 139 (556)
T ss_pred ccceEEEecceEEeehhccCCCCCEecCC----------------cCEEeeceEEC-------------CceEEEEEEEe
Confidence 99999999999999999999999999985 78999999999 89999999999
Q ss_pred ccccchhHHHHHhcccccccccchh----HHHHHHHHHHHHHHHHhhheeecCcCCccchhHHHHHHHHhhhhcccCCcc
Q 003952 375 GFETSQGKLMRTILFSTERVTANSW----ESGLFILFLVVFAVIAAGYVLKKGMEDPTRSKYKLFLSCSLIITSVIPPEL 450 (784)
Q Consensus 375 G~~T~~gkl~~~i~~~~~~~~~~~~----~~~~fi~~ll~~aii~~~~~~~~~~~~~~~~~~~~~l~~i~ii~~~vP~~L 450 (784)
|.+|..|++.+.+..+..++++.++ .+.+|+.+.++++++++.+++..+. . ..+..++.+++..+||+|
T Consensus 140 g~~t~~~~i~~~~~~~~~~~~~~~~~~~~~a~~~~~~~l~~a~~~~~~~~~~~~-----~--~~~~~~~~vlv~~~P~al 212 (556)
T TIGR01525 140 GEDSTLAQIVKLVEEAQSSKAPIQRLADRIASYYVPAVLAIALLTFVVWLALGA-----L--GALYRALAVLVVACPCAL 212 (556)
T ss_pred cccCHHHHHHHHHHHHhhcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-----c--hHHHHHHHHHhhccccch
Confidence 9999999999998877666665443 3446666666666666655544331 1 567788889999999999
Q ss_pred hHHHHHHHHHHHHHHHhcCceecCCCCcCcCCceeEEEecccCcccCCceEEEEEEecCCCccccCCCCCcHHHHHHHHh
Q 003952 451 PMELSIAVNTSLIALARRGIFCTEPFRIPFAGKVDMCCFDKTGTLTSDDMEFRGVVGLSNAELEDDMTKVPVRTQEILAS 530 (784)
Q Consensus 451 p~~lslav~~s~~~l~k~~I~~~~~~~ie~lG~vd~icfDKTGTLT~~~m~v~~i~~~~~~~~~~~~~~~~~~~~~~la~ 530 (784)
|+++++++..++.+++|+||+++++..+|.+|++|++|||||||||+|+|+|.++...++.. .. ...++..
T Consensus 213 ~l~~~~~~~~~~~~~~~~gilvk~~~~le~l~~v~~i~fDKTGTLT~~~~~v~~~~~~~~~~-------~~--~~~~l~~ 283 (556)
T TIGR01525 213 GLATPVAILVAIGVAARRGILIKGGDALEKLAKVKTVVFDKTGTLTTGKPTVVDVEPLDDAS-------IS--EEELLAL 283 (556)
T ss_pred hehhHHHHHHHHHHHHHCCceecCchHHHHhhcCCEEEEeCCCCCcCCceEEEEEEecCCCC-------cc--HHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999987654311 00 1123444
Q ss_pred ccceEeeCCcccCCHHHHHHHhccCccccCCCccccCCCCCcceeEEEEEccCCCCCeeEEEEEECCEEEEEEeCchHHH
Q 003952 531 CHALVFVDNKLVGDPLEKAALKGIDWSYKSDEKAMPKRGGGNAVQIVQRHHFASHLKRMSVVVRVQEEFFAFVKGAPETI 610 (784)
Q Consensus 531 chsl~~~~~~~~gdple~All~~~~~~~~~~~~~~~~~~~~~~~~il~~~~Fss~~krmsviv~~~~~~~~~~KGapE~I 610 (784)
|.++.. ...||+++|+++++... ..+.. . . ++ .+.+ ...++.+..++. ..+..|+++.+
T Consensus 284 a~~~e~----~~~hp~~~Ai~~~~~~~-~~~~~---~----~-~~-~~~~------~~~gi~~~~~g~-~~~~lg~~~~~ 342 (556)
T TIGR01525 284 AAALEQ----SSSHPLARAIVRYAKKR-GLELP---K----Q-ED-VEEV------PGKGVEATVDGQ-EEVRIGNPRLL 342 (556)
T ss_pred HHHHhc----cCCChHHHHHHHHHHhc-CCCcc---c----c-cC-eeEe------cCCeEEEEECCe-eEEEEecHHHH
Confidence 444432 25799999999876421 00000 0 0 00 0011 112344444551 26778999987
Q ss_pred HHhhccCchhHHHHHHHHhhccCeEEEEEEEeCCCCChhhHhhhhhhhccCCcEEEEEEeecCCCCcchHHHHHHHhhCC
Q 003952 611 QDRLTDLPSSYIETYKKYTHQGSRVLALAFKSLPDMTVSDARSLHRDEVENGLTFAGFAVFNCPIREDSAKILSELKNSS 690 (784)
Q Consensus 611 ~~~~~~~p~~~~~~~~~~~~~G~Rvlala~k~l~~~~~~~~~~~~r~~~E~~l~flG~l~~~d~lr~da~~~I~~L~~ag 690 (784)
...-...+ .+.+..+.++++|+|+++++ .|.+++|.+.++|++||+++++|+.|++.|
T Consensus 343 ~~~~~~~~-~~~~~~~~~~~~g~~~~~v~---------------------~~~~~~g~i~~~d~~~~g~~e~l~~L~~~g 400 (556)
T TIGR01525 343 ELAAEPIS-ASPDLLNEGESQGKTVVFVA---------------------VDGELLGVIALRDQLRPEAKEAIAALKRAG 400 (556)
T ss_pred hhcCCCch-hhHHHHHHHhhCCcEEEEEE---------------------ECCEEEEEEEecccchHhHHHHHHHHHHcC
Confidence 22112222 33455677889999999998 456999999999999999999999999999
Q ss_pred -CcEEEEcCCCHHHHHHHHHHcccccCCcEEEecCCCCCeeEEeCCCcccccccchhhhhccC-CCeeEEEechhHHHHh
Q 003952 691 -QDLAMITGDQALTACYVASQVHIVTKPVLILCPVKNGKVYEWVSPDETEKIQYSEKEVEGLT-DAHDLCIGGDCFEMLQ 768 (784)
Q Consensus 691 -i~v~MITGDn~~TA~~VA~~~gI~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~~~l~~tGd~l~~l~ 768 (784)
+++.|+|||+..+|.++|+++||.+....+.+ ++ +...+++++ ....++|+||+.|.+.
T Consensus 401 ~i~v~ivTgd~~~~a~~i~~~lgi~~~f~~~~p-------------~~------K~~~v~~l~~~~~~v~~vGDg~nD~~ 461 (556)
T TIGR01525 401 GIKLVMLTGDNRSAAEAVAAELGIDEVHAELLP-------------ED------KLAIVKELQEEGGVVAMVGDGINDAP 461 (556)
T ss_pred CCeEEEEeCCCHHHHHHHHHHhCCCeeeccCCH-------------HH------HHHHHHHHHHcCCEEEEEECChhHHH
Confidence 99999999999999999999999532221110 01 223344444 2346999999999873
No 27
>TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase. .
Probab=100.00 E-value=9.7e-56 Score=510.66 Aligned_cols=426 Identities=22% Similarity=0.253 Sum_probs=327.3
Q ss_pred HHhhhhcccchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh-CCceEEEEEcCeEEEeecCCCCCCcEEEEcCCC
Q 003952 207 VFCVGLWCLDEYWYYSLFTLFMLFMFESTMAKSRLKTLTEIRRVRV-DNQTIMVHRCGKWVKLAGTDLVPGDVVSIGRSS 285 (784)
Q Consensus 207 i~~~~lw~l~~y~~~~~~~l~~l~~~~~~~~~~~~~~~~~l~~~~~-~~~~v~V~R~g~~~~I~s~~LvpGDiV~i~~ge 285 (784)
+.+++.|++.+| +.+.++++++++......++++|+.+.++++.. .|.+++|+|||+++++++++|+|||+|.+++|+
T Consensus 7 ~a~~~~~~~~~~-~~~~~i~~~~~~~~~l~~~~~~~a~~~l~~l~~~~~~~~~v~r~g~~~~i~~~~l~~GDiv~v~~G~ 85 (536)
T TIGR01512 7 LAALGAVAIGEY-LEGALLLLLFSIGETLEEYASGRARRALKALMELAPDTARVLRGGSLEEVAVEELKVGDVVVVKPGE 85 (536)
T ss_pred HHHHHHHHHhhH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEECCEEEEEEHHHCCCCCEEEEcCCC
Confidence 334445555554 556666666666777777888888888888776 688999999999999999999999999999887
Q ss_pred CCCCCCCeecceeeEeeCeeEeeccCCCCCCcceeeccccCCCCccccccccCCCeeEEeeeeEeecCCCCCcCCCCCCC
Q 003952 286 GQTGEDKSVPADMLILGGSAIVNEAILTGESTPQWKVSIMGRETGEKLSARRDKSHVLFGGTKILQHTPDKTFPLKTPDG 365 (784)
Q Consensus 286 ~d~~~~~~vPaD~ill~G~~~VdES~LTGES~Pv~K~~~~~~~~~~~~~~~~~~~~~lf~GT~v~~~~~~~~~~~~~~~g 365 (784)
.|||||++++|++.||||+|||||.|+.|.+ ++.+|+||.+. +|
T Consensus 86 -------~iP~Dg~ii~g~~~vdes~lTGEs~pv~k~~----------------g~~v~aGt~v~-------------~G 129 (536)
T TIGR01512 86 -------RVPVDGVVLSGTSTVDESALTGESVPVEKAP----------------GDEVFAGAINL-------------DG 129 (536)
T ss_pred -------EeecceEEEeCcEEEEecccCCCCCcEEeCC----------------CCEEEeeeEEC-------------Cc
Confidence 9999999999999999999999999999986 78999999999 89
Q ss_pred ceEEEEEeeccccchhHHHHHhcccccccccchhH----HHHHHHHHHHHHHHHhhheeecCcCCccchhHHHHHHHHhh
Q 003952 366 GCLAVVLRTGFETSQGKLMRTILFSTERVTANSWE----SGLFILFLVVFAVIAAGYVLKKGMEDPTRSKYKLFLSCSLI 441 (784)
Q Consensus 366 ~~~~~V~~TG~~T~~gkl~~~i~~~~~~~~~~~~~----~~~fi~~ll~~aii~~~~~~~~~~~~~~~~~~~~~l~~i~i 441 (784)
.+.++|++||.+|..|++.+.+..++.++++.++. +.+|++++++++++.+.+++..+ . ....+..++.+
T Consensus 130 ~~~~~V~~~g~~t~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~----~~~~~~~~~sv 203 (536)
T TIGR01512 130 VLTIVVTKLPADSTIAKIVNLVEEAQSRKAKTQRFIDRFARYYTPVVLAIALAIWLVPGLLK--R----WPFWVYRALVL 203 (536)
T ss_pred eEEEEEEEeccccHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc--c----cHHHHHHHHHH
Confidence 99999999999999999999988766666654443 44566666655655544443322 1 11267778889
Q ss_pred hhcccCCcchHHHHHHHHHHHHHHHhcCceecCCCCcCcCCceeEEEecccCcccCCceEEEEEEecCCCccccCCCCCc
Q 003952 442 ITSVIPPELPMELSIAVNTSLIALARRGIFCTEPFRIPFAGKVDMCCFDKTGTLTSDDMEFRGVVGLSNAELEDDMTKVP 521 (784)
Q Consensus 442 i~~~vP~~Lp~~lslav~~s~~~l~k~~I~~~~~~~ie~lG~vd~icfDKTGTLT~~~m~v~~i~~~~~~~~~~~~~~~~ 521 (784)
++.++||+||+++++++..++.+++|+||+++++.++|.+|++|++|||||||||+|+|++.++...
T Consensus 204 lv~~~P~aL~la~~~~~~~~~~~~~k~gilik~~~~le~l~~v~~i~fDKTGTLT~~~~~v~~~~~~------------- 270 (536)
T TIGR01512 204 LVVASPCALVISAPAAYLSAISAAARHGILIKGGAALEALAKIKTVAFDKTGTLTTGRPKVVDVVPA------------- 270 (536)
T ss_pred HhhcCccccccchHHHHHHHHHHHHHCCeEEcCcHHHHhhcCCCEEEECCCCCCcCCceEEEEeeHH-------------
Confidence 9999999999999999999999999999999999999999999999999999999999999987531
Q ss_pred HHHHHHHHhccceEeeCCcccCCHHHHHHHhccCccccCCCccccCCCCCcceeEEEEEccCCCCCeeEEEEEECCEEEE
Q 003952 522 VRTQEILASCHALVFVDNKLVGDPLEKAALKGIDWSYKSDEKAMPKRGGGNAVQIVQRHHFASHLKRMSVVVRVQEEFFA 601 (784)
Q Consensus 522 ~~~~~~la~chsl~~~~~~~~gdple~All~~~~~~~~~~~~~~~~~~~~~~~~il~~~~Fss~~krmsviv~~~~~~~~ 601 (784)
+ ++..+.++. ....||+++|+++++.-. + + +.-.+.+| ..++....+++ .
T Consensus 271 -~---~l~~a~~~e----~~~~hp~~~Ai~~~~~~~----~---~-------~~~~~~~~------g~gi~~~~~g~--~ 320 (536)
T TIGR01512 271 -E---VLRLAAAAE----QASSHPLARAIVDYARKR----E---N-------VESVEEVP------GEGVRAVVDGG--E 320 (536)
T ss_pred -H---HHHHHHHHh----ccCCCcHHHHHHHHHHhc----C---C-------CcceEEec------CCeEEEEECCe--E
Confidence 1 222222222 225799999999876311 0 0 00011111 12344445565 3
Q ss_pred EEeCchHHHHHhhccCchhHHHHHHHHhhccCeEEEEEEEeCCCCChhhHhhhhhhhccCCcEEEEEEeecCCCCcchHH
Q 003952 602 FVKGAPETIQDRLTDLPSSYIETYKKYTHQGSRVLALAFKSLPDMTVSDARSLHRDEVENGLTFAGFAVFNCPIREDSAK 681 (784)
Q Consensus 602 ~~KGapE~I~~~~~~~p~~~~~~~~~~~~~G~Rvlala~k~l~~~~~~~~~~~~r~~~E~~l~flG~l~~~d~lr~da~~ 681 (784)
+..|+++.+.+... ..+..+|.+++.++ .|..++|.+.++|++||++++
T Consensus 321 ~~ig~~~~~~~~~~----------~~~~~~~~~~~~v~---------------------~~~~~~g~i~~~d~l~~~~~e 369 (536)
T TIGR01512 321 VRIGNPRSLEAAVG----------ARPESAGKTIVHVA---------------------RDGTYLGYILLSDEPRPDAAE 369 (536)
T ss_pred EEEcCHHHHhhcCC----------cchhhCCCeEEEEE---------------------ECCEEEEEEEEeccchHHHHH
Confidence 45799987754321 14567888888776 567999999999999999999
Q ss_pred HHHHHhhCCC-cEEEEcCCCHHHHHHHHHHcccccCCcEEEecCCCCCeeEEeCCCcccccccchhhhhccCCCe-eEEE
Q 003952 682 ILSELKNSSQ-DLAMITGDQALTACYVASQVHIVTKPVLILCPVKNGKVYEWVSPDETEKIQYSEKEVEGLTDAH-DLCI 759 (784)
Q Consensus 682 ~I~~L~~agi-~v~MITGDn~~TA~~VA~~~gI~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~l~~ 759 (784)
+|+.|+++|+ ++.|+|||+..+|..+|+++||.+....+.+. + +...+++++.+. .++|
T Consensus 370 ~i~~L~~~Gi~~v~vvTgd~~~~a~~i~~~lgi~~~f~~~~p~-------------~------K~~~i~~l~~~~~~v~~ 430 (536)
T TIGR01512 370 AIAELKALGIEKVVMLTGDRRAVAERVARELGIDEVHAELLPE-------------D------KLEIVKELREKYGPVAM 430 (536)
T ss_pred HHHHHHHcCCCcEEEEcCCCHHHHHHHHHHcCChhhhhccCcH-------------H------HHHHHHHHHhcCCEEEE
Confidence 9999999999 99999999999999999999996432222211 1 233444444443 5999
Q ss_pred echhHHHHh
Q 003952 760 GGDCFEMLQ 768 (784)
Q Consensus 760 tGd~l~~l~ 768 (784)
+||+.|.+.
T Consensus 431 vGDg~nD~~ 439 (536)
T TIGR01512 431 VGDGINDAP 439 (536)
T ss_pred EeCCHHHHH
Confidence 999999874
No 28
>KOG0210 consensus P-type ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.4e-55 Score=479.58 Aligned_cols=557 Identities=22% Similarity=0.290 Sum_probs=386.5
Q ss_pred HHHhcCCCCccCCCCc---cHH-HHHHHHhhhhHHHHHHHhhhhcc--------cchhhhhHHHHHHHHHHHHHHHHHHH
Q 003952 173 VATEKWGRNVFEYPQP---TFQ-KLMKENCMEPFFVFQVFCVGLWC--------LDEYWYYSLFTLFMLFMFESTMAKSR 240 (784)
Q Consensus 173 ~~~~~yG~N~~~~~~~---s~~-~ll~~~~~~pf~vfqi~~~~lw~--------l~~y~~~~~~~l~~l~~~~~~~~~~~ 240 (784)
.++++|-+|.+...+. +|. ..+.+||...+++|.+...+..+ +..||..-.|.+.+.++-++..-.+|
T Consensus 74 ~~~~r~~pn~v~nqKyn~~tF~p~vl~~qF~~F~nlyfll~alsQ~ip~~~ig~l~ty~~pl~fvl~itl~keavdd~~r 153 (1051)
T KOG0210|consen 74 YRRRRFPPNEVRNQKYNIFTFVPAVLFEQFKFFLNLYFLLVALSQLIPALKIGYLSTYWGPLGFVLTITLIKEAVDDLKR 153 (1051)
T ss_pred cccccCCCchhhhcccceEEeeHHHHHHHHHHHHHHHHHHHHHHhhCchheecchhhhhHHHHHHHHHHHHHHHHHHHHH
Confidence 4577899999988764 433 44556665555444333322222 23444444444444444333333333
Q ss_pred HHHHHHHHhhhh-CCceEEEE-EcCeEEEeecCCCCCCcEEEEcCCCCCCCCCCeecceeeEee-----CeeEeeccCCC
Q 003952 241 LKTLTEIRRVRV-DNQTIMVH-RCGKWVKLAGTDLVPGDVVSIGRSSGQTGEDKSVPADMLILG-----GSAIVNEAILT 313 (784)
Q Consensus 241 ~~~~~~l~~~~~-~~~~v~V~-R~g~~~~I~s~~LvpGDiV~i~~ge~d~~~~~~vPaD~ill~-----G~~~VdES~LT 313 (784)
.++... +.+..+++ |+|-..+ +++++.+||+|.+..++ +||||+++|+ |+|.+-+-.|+
T Consensus 154 ------~~rd~~~Nse~y~~ltr~~~~~~-~Ss~i~vGDvi~v~K~~-------RVPADmilLrTsd~sg~~FiRTDQLD 219 (1051)
T KOG0210|consen 154 ------RRRDRELNSEKYTKLTRDGTRRE-PSSDIKVGDVIIVHKDE-------RVPADMILLRTSDKSGSCFIRTDQLD 219 (1051)
T ss_pred ------HHhhhhhhhhhheeeccCCcccc-cccccccccEEEEecCC-------cCCcceEEEEccCCCCceEEeccccC
Confidence 222222 33344454 6665444 99999999999999777 9999999994 88999999999
Q ss_pred CCCcceeeccccCCC------------------Ccccccc------c-------cCCCeeEEeeeeEeecCCCCCcCCCC
Q 003952 314 GESTPQWKVSIMGRE------------------TGEKLSA------R-------RDKSHVLFGGTKILQHTPDKTFPLKT 362 (784)
Q Consensus 314 GES~Pv~K~~~~~~~------------------~~~~~~~------~-------~~~~~~lf~GT~v~~~~~~~~~~~~~ 362 (784)
||+....|-|+|... ..+..++ . -+-.|+|+++|.+.
T Consensus 220 GETDWKLrl~vp~tQ~l~~~~el~~i~v~Ae~P~kdIh~F~Gt~~~~d~~~~~~LsventLWanTVvA------------ 287 (1051)
T KOG0210|consen 220 GETDWKLRLPVPRTQHLTEDSELMEISVYAEKPQKDIHSFVGTFTITDSDKPESLSVENTLWANTVVA------------ 287 (1051)
T ss_pred CcccceeeccchhhccCCcccchheEEEeccCcchhhHhhEEEEEEecCCCCCcccccceeeeeeeEe------------
Confidence 999988888875311 1111100 0 02357888888887
Q ss_pred CCCceEEEEEeeccccchhHHHHHhcc---cccccccchhHHHHHHHHHHHHHHHHh-hheeecCcCCccchhHHHHHHH
Q 003952 363 PDGGCLAVVLRTGFETSQGKLMRTILF---STERVTANSWESGLFILFLVVFAVIAA-GYVLKKGMEDPTRSKYKLFLSC 438 (784)
Q Consensus 363 ~~g~~~~~V~~TG~~T~~gkl~~~i~~---~~~~~~~~~~~~~~fi~~ll~~aii~~-~~~~~~~~~~~~~~~~~~~l~~ 438 (784)
+|.++|+|++||.+|. +++. |+.+.-..+.+...+..+|.++.++.+ +.+...|+. ..++..++++
T Consensus 288 -s~t~~gvVvYTG~dtR------svMNts~pr~KvGllelEiN~ltKiL~~~vlvLs~vmv~~~g~~---~~wyi~~~Rf 357 (1051)
T KOG0210|consen 288 -SGTAIGVVVYTGRDTR------SVMNTSRPRSKVGLLELEINGLTKILFCFVLVLSIVMVAMKGFG---SDWYIYIIRF 357 (1051)
T ss_pred -cCcEEEEEEEecccHH------HHhccCCcccccceeeeecccHHHHHHHHHHHHHHHHHHhhcCC---CchHHHHHHH
Confidence 7889999999999993 3332 222333455566555555555544433 334455643 4577888999
Q ss_pred HhhhhcccCCcchHHHHHHHHHHHHHHHh----cCceecCCCCcCcCCceeEEEecccCcccCCceEEEEEEecC----C
Q 003952 439 SLIITSVIPPELPMELSIAVNTSLIALAR----RGIFCTEPFRIPFAGKVDMCCFDKTGTLTSDDMEFRGVVGLS----N 510 (784)
Q Consensus 439 i~ii~~~vP~~Lp~~lslav~~s~~~l~k----~~I~~~~~~~ie~lG~vd~icfDKTGTLT~~~m~v~~i~~~~----~ 510 (784)
+.++.++||.+|-+.+.+|-........+ .|..++....-|.+|+|..+.+|||||||+|+|.++.++... .
T Consensus 358 llLFS~IIPISLRvnlDmaK~~ys~~i~~D~~IpgtvvRSstIPEeLGRIsylLtDKTGTLTqNEM~~KKiHLGTv~~s~ 437 (1051)
T KOG0210|consen 358 LLLFSSIIPISLRVNLDMAKIVYSWQIEHDKNIPGTVVRSSTIPEELGRISYLLTDKTGTLTQNEMEFKKIHLGTVAYSA 437 (1051)
T ss_pred HHHHhhhceeEEEEehhHHHhhHhhhcccCCCCCceeeecCCChHHhcceEEEEecCcCccccchheeeeeeeeeeeccH
Confidence 99999999999999998887666555443 367888888888999999999999999999999999887421 1
Q ss_pred C----------ccc---------------cCCCCCcHHHHHHHHhccceEe---eCCcc---cCCHHHHHHHhcc---Cc
Q 003952 511 A----------ELE---------------DDMTKVPVRTQEILASCHALVF---VDNKL---VGDPLEKAALKGI---DW 556 (784)
Q Consensus 511 ~----------~~~---------------~~~~~~~~~~~~~la~chsl~~---~~~~~---~gdple~All~~~---~~ 556 (784)
+ ... .+.+..-.+..+++|.||+... .||+. ..+|.|.|++++. |.
T Consensus 438 e~~~eV~~~i~s~~~~~~~~~~~~~~~~k~~~s~rv~~~V~alalCHNVTPv~e~~ge~sYQAaSPDEVAiVkwTe~VGl 517 (1051)
T KOG0210|consen 438 ETMDEVSQHIQSLYTPGRNKGKGALSRVKKDMSARVRNAVLALALCHNVTPVFEDDGEVSYQAASPDEVAIVKWTETVGL 517 (1051)
T ss_pred hHHHHHHHHHHHhhCCCcccccccchhhcCcccHHHHHHHHHHHHhccCCcccCCCceEEeecCCCCeEEEEEeeeecce
Confidence 0 000 0011112356789999999873 23343 4689999999865 33
Q ss_pred cccCCCcc-c--c-CCCCCcceeEEEEEccCCCCCeeEEEEEEC--CEEEEEEeCchHHHHHhhccCchhHHHHHHHHhh
Q 003952 557 SYKSDEKA-M--P-KRGGGNAVQIVQRHHFASHLKRMSVVVRVQ--EEFFAFVKGAPETIQDRLTDLPSSYIETYKKYTH 630 (784)
Q Consensus 557 ~~~~~~~~-~--~-~~~~~~~~~il~~~~Fss~~krmsviv~~~--~~~~~~~KGapE~I~~~~~~~p~~~~~~~~~~~~ 630 (784)
.+...+.. . . ..+....++|++.|||.|+.|||++||+.+ ++...|.|||.-.|..+. +..++.++...+||+
T Consensus 518 ~L~~Rd~~~itL~~~~~~~~~yqIL~vFPFtsEtKRMGIIVr~e~~~evtfylKGAD~VMs~iV-q~NdWleEE~gNMAR 596 (1051)
T KOG0210|consen 518 KLAKRDRHAITLRVPLDDELNYQILQVFPFTSETKRMGIIVRDETTEEVTFYLKGADVVMSGIV-QYNDWLEEECGNMAR 596 (1051)
T ss_pred EEeecccceEEEecCCCcceeEEEEEEeccccccceeeEEEecCCCceEEEEEecchHHHhccc-ccchhhhhhhhhhhh
Confidence 33333211 1 1 123345799999999999999999999987 689999999998887654 456788899999999
Q ss_pred ccCeEEEEEEEeCCCCChhhHhh---------hhh---------hhccCCcEEEEEEeecCCCCcchHHHHHHHhhCCCc
Q 003952 631 QGSRVLALAFKSLPDMTVSDARS---------LHR---------DEVENGLTFAGFAVFNCPIREDSAKILSELKNSSQD 692 (784)
Q Consensus 631 ~G~Rvlala~k~l~~~~~~~~~~---------~~r---------~~~E~~l~flG~l~~~d~lr~da~~~I~~L~~agi~ 692 (784)
+|+|+|.+|.|.+++.+++.++. .+| ..+|.||.++|+.+.||+|++|++.+++.||+|||+
T Consensus 597 EGLRtLVvakK~Ls~~eye~Fe~~y~~A~lSi~dR~~~ma~vv~~~LE~dlelL~LTGVEDkLQ~dVk~tLElLRNAgik 676 (1051)
T KOG0210|consen 597 EGLRTLVVAKKVLSEEEYEAFEEAYNAAKLSISDRDQKMANVVERYLERDLELLGLTGVEDKLQDDVKPTLELLRNAGIK 676 (1051)
T ss_pred hcceEEEEEecccCHHHHHHHHHHHHhhhCccchHHHHHHHHHHHHHHhhhHHhcccChHHHHhhhhHhHHHHHhhcCcE
Confidence 99999999999998665543221 122 268999999999999999999999999999999999
Q ss_pred EEEEcCCCHHHHHHHHHHcccccCCcEEEecCCCCCeeEEeCCCcccccccchhhhhccCCC--eeEEEechhHHHHhcC
Q 003952 693 LAMITGDQALTACYVASQVHIVTKPVLILCPVKNGKVYEWVSPDETEKIQYSEKEVEGLTDA--HDLCIGGDCFEMLQQT 770 (784)
Q Consensus 693 v~MITGDn~~TA~~VA~~~gI~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~~l~~tGd~l~~l~~~ 770 (784)
+||+|||..+||+.||+..+++.+.+.+..-. ++..... -..++..+.++ ..++|.|++++.+++.
T Consensus 677 iWMLTGDKlETA~ciAkSs~L~sR~q~ihv~~---------~v~sr~d---ah~eL~~lR~k~~~aLvi~G~Sl~~cl~y 744 (1051)
T KOG0210|consen 677 IWMLTGDKLETAICIAKSSRLFSRGQYIHVIR---------SVTSRGD---AHNELNNLRRKTDCALVIDGESLEFCLKY 744 (1051)
T ss_pred EEEEcCcchhheeeeehhccceecCceEEEEE---------ecCCchH---HHHHHHHhhcCCCcEEEEcCchHHHHHHH
Confidence 99999999999999999999998776665311 1110000 11233334443 4499999999999886
Q ss_pred --chHhhhcc
Q 003952 771 --SAVLRVIP 778 (784)
Q Consensus 771 --~~~~~~~~ 778 (784)
+++.++..
T Consensus 745 ye~Ef~el~~ 754 (1051)
T KOG0210|consen 745 YEDEFIELVC 754 (1051)
T ss_pred HHHHHHHHHH
Confidence 55655443
No 29
>TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase. One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification.
Probab=100.00 E-value=5.4e-55 Score=506.18 Aligned_cols=421 Identities=19% Similarity=0.236 Sum_probs=320.3
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh-CCceEEEEEc-CeEEEeecCCCCCCcEEEEcCCCCCCCCCCeec
Q 003952 218 YWYYSLFTLFMLFMFESTMAKSRLKTLTEIRRVRV-DNQTIMVHRC-GKWVKLAGTDLVPGDVVSIGRSSGQTGEDKSVP 295 (784)
Q Consensus 218 y~~~~~~~l~~l~~~~~~~~~~~~~~~~~l~~~~~-~~~~v~V~R~-g~~~~I~s~~LvpGDiV~i~~ge~d~~~~~~vP 295 (784)
|+..+.++++++.+.+....+.+.|+.+.++++.. .|.+++++|+ |++++|++++|+|||+|.|++|+ +||
T Consensus 53 ~~~~~~~i~~~~~~g~~le~~~~~~a~~~~~~L~~~~p~~a~~~~~~~~~~~v~~~~l~~GDii~v~~Ge-------~iP 125 (562)
T TIGR01511 53 FFDASAMLITFILLGRWLEMLAKGRASDALSKLAKLQPSTATLLTKDGSIEEVPVALLQPGDIVKVLPGE-------KIP 125 (562)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEECCCeEEEEEHHHCCCCCEEEECCCC-------Eec
Confidence 44444444444555555666666677777776655 5888999985 67799999999999999999988 999
Q ss_pred ceeeEeeCeeEeeccCCCCCCcceeeccccCCCCccccccccCCCeeEEeeeeEeecCCCCCcCCCCCCCceEEEEEeec
Q 003952 296 ADMLILGGSAIVNEAILTGESTPQWKVSIMGRETGEKLSARRDKSHVLFGGTKILQHTPDKTFPLKTPDGGCLAVVLRTG 375 (784)
Q Consensus 296 aD~ill~G~~~VdES~LTGES~Pv~K~~~~~~~~~~~~~~~~~~~~~lf~GT~v~~~~~~~~~~~~~~~g~~~~~V~~TG 375 (784)
|||+|++|++.||||+|||||.|+.|++ ++.+|+||.+. +|.+.++|++||
T Consensus 126 ~Dg~v~~g~~~vdes~lTGEs~pv~k~~----------------gd~V~aGt~~~-------------~g~~~~~v~~~g 176 (562)
T TIGR01511 126 VDGTVIEGESEVDESLVTGESLPVPKKV----------------GDPVIAGTVNG-------------TGSLVVRATATG 176 (562)
T ss_pred CceEEEECceEEehHhhcCCCCcEEcCC----------------CCEEEeeeEEC-------------CceEEEEEEEec
Confidence 9999999999999999999999999986 88999999999 899999999999
Q ss_pred cccchhHHHHHhcccccccccchh----HHHHHHHHHHHHHHHHhhheeecCcCCccchhHHHHHHHHhhhhcccCCcch
Q 003952 376 FETSQGKLMRTILFSTERVTANSW----ESGLFILFLVVFAVIAAGYVLKKGMEDPTRSKYKLFLSCSLIITSVIPPELP 451 (784)
Q Consensus 376 ~~T~~gkl~~~i~~~~~~~~~~~~----~~~~fi~~ll~~aii~~~~~~~~~~~~~~~~~~~~~l~~i~ii~~~vP~~Lp 451 (784)
.+|..||+++.+..++.++++.++ .+.+|++++++++++++.+|+ ..+..++.+++..|||+|+
T Consensus 177 ~~t~~~~i~~~v~~a~~~k~~~~~~~d~~a~~~~~~v~~~a~~~~~~~~------------~~~~~~~svlvvacPcaL~ 244 (562)
T TIGR01511 177 EDTTLAQIVRLVRQAQQSKAPIQRLADKVAGYFVPVVIAIALITFVIWL------------FALEFAVTVLIIACPCALG 244 (562)
T ss_pred CCChHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHH------------HHHHHHHHHHHHhccchhh
Confidence 999999999999877766665443 345566666666655544332 2567788899999999999
Q ss_pred HHHHHHHHHHHHHHHhcCceecCCCCcCcCCceeEEEecccCcccCCceEEEEEEecCCCccccCCCCCcHHHHHHHHhc
Q 003952 452 MELSIAVNTSLIALARRGIFCTEPFRIPFAGKVDMCCFDKTGTLTSDDMEFRGVVGLSNAELEDDMTKVPVRTQEILASC 531 (784)
Q Consensus 452 ~~lslav~~s~~~l~k~~I~~~~~~~ie~lG~vd~icfDKTGTLT~~~m~v~~i~~~~~~~~~~~~~~~~~~~~~~la~c 531 (784)
+++++++..++.+++|+||++|++..+|.++++|++|||||||||+|+|++.++...++. .. ..++..|
T Consensus 245 la~p~a~~~~~~~aa~~gIlik~~~~lE~l~~v~~i~fDKTGTLT~g~~~v~~i~~~~~~---------~~--~~~l~~a 313 (562)
T TIGR01511 245 LATPTVIAVATGLAAKNGVLIKDGDALERAANIDTVVFDKTGTLTQGKPTVTDVHVFGDR---------DR--TELLALA 313 (562)
T ss_pred hHHHHHHHHHHHHHHHCCeEEcChHHHHHhhCCCEEEECCCCCCcCCCEEEEEEecCCCC---------CH--HHHHHHH
Confidence 999999999999999999999999999999999999999999999999999998765431 01 1234444
Q ss_pred cceEeeCCcccCCHHHHHHHhccCccccCCCccccCCCCCcceeEEEEEccCCCCCeeEEEEEECCEEEEEEeCchHHHH
Q 003952 532 HALVFVDNKLVGDPLEKAALKGIDWSYKSDEKAMPKRGGGNAVQIVQRHHFASHLKRMSVVVRVQEEFFAFVKGAPETIQ 611 (784)
Q Consensus 532 hsl~~~~~~~~gdple~All~~~~~~~~~~~~~~~~~~~~~~~~il~~~~Fss~~krmsviv~~~~~~~~~~KGapE~I~ 611 (784)
++++. .+.||+++|+++++... +....+ ...+ +.. ...++.+..+++ .+..|+++.+.
T Consensus 314 a~~e~----~s~HPia~Ai~~~~~~~---~~~~~~----~~~~---~~~------~g~Gi~~~~~g~--~~~iG~~~~~~ 371 (562)
T TIGR01511 314 AALEA----GSEHPLAKAIVSYAKEK---GITLVE----VSDF---KAI------PGIGVEGTVEGT--KIQLGNEKLLG 371 (562)
T ss_pred HHHhc----cCCChHHHHHHHHHHhc---CCCcCC----CCCe---EEE------CCceEEEEECCE--EEEEECHHHHH
Confidence 44432 24699999999876311 000000 0011 111 122455666664 56789999986
Q ss_pred HhhccCchhHHHHHHHHhhccCeEEEEEEEeCCCCChhhHhhhhhhhccCCcEEEEEEeecCCCCcchHHHHHHHhhCCC
Q 003952 612 DRLTDLPSSYIETYKKYTHQGSRVLALAFKSLPDMTVSDARSLHRDEVENGLTFAGFAVFNCPIREDSAKILSELKNSSQ 691 (784)
Q Consensus 612 ~~~~~~p~~~~~~~~~~~~~G~Rvlala~k~l~~~~~~~~~~~~r~~~E~~l~flG~l~~~d~lr~da~~~I~~L~~agi 691 (784)
+....++ .+.++|.+++.++ .|.+++|.+.++|++||+++++|++||+.|+
T Consensus 372 ~~~~~~~--------~~~~~g~~~~~~~---------------------~~~~~~g~~~~~d~l~~~a~e~i~~Lk~~Gi 422 (562)
T TIGR01511 372 ENAIKID--------GKAEQGSTSVLVA---------------------VNGELAGVFALEDQLRPEAKEVIQALKRRGI 422 (562)
T ss_pred hCCCCCC--------hhhhCCCEEEEEE---------------------ECCEEEEEEEecccccHHHHHHHHHHHHcCC
Confidence 5433322 2357899999887 5779999999999999999999999999999
Q ss_pred cEEEEcCCCHHHHHHHHHHcccccCCcEEEecCCCCCeeEEeCCCcccccccchhhhhccCCC-eeEEEechhHHHHh
Q 003952 692 DLAMITGDQALTACYVASQVHIVTKPVLILCPVKNGKVYEWVSPDETEKIQYSEKEVEGLTDA-HDLCIGGDCFEMLQ 768 (784)
Q Consensus 692 ~v~MITGDn~~TA~~VA~~~gI~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~l~~tGd~l~~l~ 768 (784)
+++|+|||+..+|..+|+++||. +.... ..++ |...+++++++ ..++|+||+.|...
T Consensus 423 ~v~ilSgd~~~~a~~ia~~lgi~-----~~~~~---------~p~~------K~~~v~~l~~~~~~v~~VGDg~nD~~ 480 (562)
T TIGR01511 423 EPVMLTGDNRKTAKAVAKELGIN-----VRAEV---------LPDD------KAALIKELQEKGRVVAMVGDGINDAP 480 (562)
T ss_pred eEEEEcCCCHHHHHHHHHHcCCc-----EEccC---------ChHH------HHHHHHHHHHcCCEEEEEeCCCccHH
Confidence 99999999999999999999993 22110 0001 23334444433 46999999998863
No 30
>PRK10671 copA copper exporting ATPase; Provisional
Probab=100.00 E-value=4.1e-54 Score=521.52 Aligned_cols=431 Identities=21% Similarity=0.261 Sum_probs=329.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh-CCceEEEEEcCeEEEeecCCCCCCcEEEEcCCCCCCCCCCeecceeeE
Q 003952 222 SLFTLFMLFMFESTMAKSRLKTLTEIRRVRV-DNQTIMVHRCGKWVKLAGTDLVPGDVVSIGRSSGQTGEDKSVPADMLI 300 (784)
Q Consensus 222 ~~~~l~~l~~~~~~~~~~~~~~~~~l~~~~~-~~~~v~V~R~g~~~~I~s~~LvpGDiV~i~~ge~d~~~~~~vPaD~il 300 (784)
+.++++++.+......+.+.|+.+.++++.. .|..++|+|+|++++|++++|+|||+|.|++|+ +|||||+|
T Consensus 289 ~~~i~~~~~~g~~le~~~~~~~~~~~~~L~~l~p~~a~~~~~~~~~~v~~~~l~~GD~v~v~~G~-------~iP~Dg~v 361 (834)
T PRK10671 289 SAMIIGLINLGHMLEARARQRSSKALEKLLDLTPPTARVVTDEGEKSVPLADVQPGMLLRLTTGD-------RVPVDGEI 361 (834)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEEEeCCcEEEEEHHHcCCCCEEEEcCCC-------EeeeeEEE
Confidence 4555555555666666667677777777665 688999999999999999999999999999988 99999999
Q ss_pred eeCeeEeeccCCCCCCcceeeccccCCCCccccccccCCCeeEEeeeeEeecCCCCCcCCCCCCCceEEEEEeeccccch
Q 003952 301 LGGSAIVNEAILTGESTPQWKVSIMGRETGEKLSARRDKSHVLFGGTKILQHTPDKTFPLKTPDGGCLAVVLRTGFETSQ 380 (784)
Q Consensus 301 l~G~~~VdES~LTGES~Pv~K~~~~~~~~~~~~~~~~~~~~~lf~GT~v~~~~~~~~~~~~~~~g~~~~~V~~TG~~T~~ 380 (784)
++|++.||||+|||||.|+.|.+ ++.+|+||.+. +|.+.++|++||.+|..
T Consensus 362 ~~g~~~vdeS~lTGEs~pv~k~~----------------gd~V~aGt~~~-------------~G~~~~~v~~~g~~t~l 412 (834)
T PRK10671 362 TQGEAWLDEAMLTGEPIPQQKGE----------------GDSVHAGTVVQ-------------DGSVLFRASAVGSHTTL 412 (834)
T ss_pred EEceEEEeehhhcCCCCCEecCC----------------CCEEEecceec-------------ceeEEEEEEEEcCcChH
Confidence 99999999999999999999986 88999999999 89999999999999999
Q ss_pred hHHHHHhcccccccccc----hhHHHHHHHHHHHHHHHHhhheeecCcCCccchhHHHHHHHHhhhhcccCCcchHHHHH
Q 003952 381 GKLMRTILFSTERVTAN----SWESGLFILFLVVFAVIAAGYVLKKGMEDPTRSKYKLFLSCSLIITSVIPPELPMELSI 456 (784)
Q Consensus 381 gkl~~~i~~~~~~~~~~----~~~~~~fi~~ll~~aii~~~~~~~~~~~~~~~~~~~~~l~~i~ii~~~vP~~Lp~~lsl 456 (784)
|++++.+..++..+++. ++.+.+|++++++++++.+.+|+..+. ...+...+..++.+++..|||+|++++++
T Consensus 413 ~~i~~lv~~a~~~k~~~~~~~d~~a~~~v~~v~~~a~~~~~~~~~~~~---~~~~~~~~~~a~~vlv~acPcaL~la~p~ 489 (834)
T PRK10671 413 SRIIRMVRQAQSSKPEIGQLADKISAVFVPVVVVIALVSAAIWYFFGP---APQIVYTLVIATTVLIIACPCALGLATPM 489 (834)
T ss_pred HHHHHHHHHHhccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC---chHHHHHHHHHHHHHHHhcccchhhhHHH
Confidence 99999998766555543 344567777777777766655544331 11233456678889999999999999999
Q ss_pred HHHHHHHHHHhcCceecCCCCcCcCCceeEEEecccCcccCCceEEEEEEecCCCccccCCCCCcHHHHHHHHhccceEe
Q 003952 457 AVNTSLIALARRGIFCTEPFRIPFAGKVDMCCFDKTGTLTSDDMEFRGVVGLSNAELEDDMTKVPVRTQEILASCHALVF 536 (784)
Q Consensus 457 av~~s~~~l~k~~I~~~~~~~ie~lG~vd~icfDKTGTLT~~~m~v~~i~~~~~~~~~~~~~~~~~~~~~~la~chsl~~ 536 (784)
++..++.+++|+||++|++..+|.+|++|++|||||||||+|+|+|.++...++. ... .++..+.+++
T Consensus 490 a~~~~~~~~a~~gilvk~~~~le~l~~v~~v~fDKTGTLT~g~~~v~~~~~~~~~---------~~~--~~l~~a~~~e- 557 (834)
T PRK10671 490 SIISGVGRAAEFGVLVRDADALQRASTLDTLVFDKTGTLTEGKPQVVAVKTFNGV---------DEA--QALRLAAALE- 557 (834)
T ss_pred HHHHHHHHHHHCCeEEecHHHHHhhcCCCEEEEcCCCccccCceEEEEEEccCCC---------CHH--HHHHHHHHHh-
Confidence 9999999999999999999999999999999999999999999999988754321 011 1222222222
Q ss_pred eCCcccCCHHHHHHHhccCccccCCCccccCCCCCcceeEEEEEccCCCCCeeEEEEEECCEEEEEEeCchHHHHHhhcc
Q 003952 537 VDNKLVGDPLEKAALKGIDWSYKSDEKAMPKRGGGNAVQIVQRHHFASHLKRMSVVVRVQEEFFAFVKGAPETIQDRLTD 616 (784)
Q Consensus 537 ~~~~~~gdple~All~~~~~~~~~~~~~~~~~~~~~~~~il~~~~Fss~~krmsviv~~~~~~~~~~KGapE~I~~~~~~ 616 (784)
..+.||+++|+++++.- .. .+. ..+|.... ..++....+++ .+.+|+++.+.+....
T Consensus 558 ---~~s~hp~a~Ai~~~~~~-----~~-~~~-----------~~~~~~~~-g~Gv~~~~~g~--~~~~G~~~~~~~~~~~ 614 (834)
T PRK10671 558 ---QGSSHPLARAILDKAGD-----MT-LPQ-----------VNGFRTLR-GLGVSGEAEGH--ALLLGNQALLNEQQVD 614 (834)
T ss_pred ---CCCCCHHHHHHHHHHhh-----CC-CCC-----------cccceEec-ceEEEEEECCE--EEEEeCHHHHHHcCCC
Confidence 12579999999987531 00 000 01122111 12444445555 4677999988654322
Q ss_pred CchhHHHHHHHHhhccCeEEEEEEEeCCCCChhhHhhhhhhhccCCcEEEEEEeecCCCCcchHHHHHHHhhCCCcEEEE
Q 003952 617 LPSSYIETYKKYTHQGSRVLALAFKSLPDMTVSDARSLHRDEVENGLTFAGFAVFNCPIREDSAKILSELKNSSQDLAMI 696 (784)
Q Consensus 617 ~p~~~~~~~~~~~~~G~Rvlala~k~l~~~~~~~~~~~~r~~~E~~l~flG~l~~~d~lr~da~~~I~~L~~agi~v~MI 696 (784)
.+...+.++.+.++|.+++.+++ |..++|++.++|++||+++++|+.|++.|++++|+
T Consensus 615 -~~~~~~~~~~~~~~g~~~v~va~---------------------~~~~~g~~~l~d~~r~~a~~~i~~L~~~gi~v~~~ 672 (834)
T PRK10671 615 -TKALEAEITAQASQGATPVLLAV---------------------DGKAAALLAIRDPLRSDSVAALQRLHKAGYRLVML 672 (834)
T ss_pred -hHHHHHHHHHHHhCCCeEEEEEE---------------------CCEEEEEEEccCcchhhHHHHHHHHHHCCCeEEEE
Confidence 23456667788899999999983 45799999999999999999999999999999999
Q ss_pred cCCCHHHHHHHHHHcccccCCcEEEecCCCCCeeEEeCCCcccccccchhhhhccCCCe-eEEEechhHHHH
Q 003952 697 TGDQALTACYVASQVHIVTKPVLILCPVKNGKVYEWVSPDETEKIQYSEKEVEGLTDAH-DLCIGGDCFEML 767 (784)
Q Consensus 697 TGDn~~TA~~VA~~~gI~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~l~~tGd~l~~l 767 (784)
|||+..+|..+|+++||.+....+. +++ |...+++++.+. .++|+||+.|++
T Consensus 673 Tgd~~~~a~~ia~~lgi~~~~~~~~-------------p~~------K~~~i~~l~~~~~~v~~vGDg~nD~ 725 (834)
T PRK10671 673 TGDNPTTANAIAKEAGIDEVIAGVL-------------PDG------KAEAIKRLQSQGRQVAMVGDGINDA 725 (834)
T ss_pred cCCCHHHHHHHHHHcCCCEEEeCCC-------------HHH------HHHHHHHHhhcCCEEEEEeCCHHHH
Confidence 9999999999999999963111111 001 333445555443 699999999987
No 31
>KOG0207 consensus Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.9e-55 Score=498.11 Aligned_cols=426 Identities=20% Similarity=0.233 Sum_probs=340.7
Q ss_pred HHHHHHHHHHHHhhhh-CCceEEEEEcCe-EEEeecCCCCCCcEEEEcCCCCCCCCCCeecceeeEeeCeeEeeccCCCC
Q 003952 237 AKSRLKTLTEIRRVRV-DNQTIMVHRCGK-WVKLAGTDLVPGDVVSIGRSSGQTGEDKSVPADMLILGGSAIVNEAILTG 314 (784)
Q Consensus 237 ~~~~~~~~~~l~~~~~-~~~~v~V~R~g~-~~~I~s~~LvpGDiV~i~~ge~d~~~~~~vPaD~ill~G~~~VdES~LTG 314 (784)
.+.+.|+-..+.++.. .|.++.++.+|+ .++|+.+.+.+||+|.|.||+ +||+||++++|++.||||++||
T Consensus 359 ~~Ak~kts~alskLmsl~p~~a~ii~~g~~e~eI~v~lvq~gdivkV~pG~-------kiPvDG~Vv~Gss~VDEs~iTG 431 (951)
T KOG0207|consen 359 SLAKGKTSEALSKLMSLAPSKATIIEDGSEEKEIPVDLVQVGDIVKVKPGE-------KIPVDGVVVDGSSEVDESLITG 431 (951)
T ss_pred HHhhccchHHHHHHhhcCcccceEeecCCcceEeeeeeeccCCEEEECCCC-------ccccccEEEeCceeechhhccC
Confidence 4445555566666544 788999999996 899999999999999999998 9999999999999999999999
Q ss_pred CCcceeeccccCCCCccccccccCCCeeEEeeeeEeecCCCCCcCCCCCCCceEEEEEeeccccchhHHHHHhccccccc
Q 003952 315 ESTPQWKVSIMGRETGEKLSARRDKSHVLFGGTKILQHTPDKTFPLKTPDGGCLAVVLRTGFETSQGKLMRTILFSTERV 394 (784)
Q Consensus 315 ES~Pv~K~~~~~~~~~~~~~~~~~~~~~lf~GT~v~~~~~~~~~~~~~~~g~~~~~V~~TG~~T~~gkl~~~i~~~~~~~ 394 (784)
||+||.|.+ ++.+.+||.+. +|.....++++|.+|..+++++++..++..+
T Consensus 432 Es~PV~Kk~----------------gs~ViaGsiN~-------------nG~l~VkaT~~g~dttla~IvkLVEEAQ~sK 482 (951)
T KOG0207|consen 432 ESMPVPKKK----------------GSTVIAGSINL-------------NGTLLVKATKVGGDTTLAQIVKLVEEAQLSK 482 (951)
T ss_pred CceecccCC----------------CCeeeeeeecC-------------CceEEEEEEeccccchHHHHHHHHHHHHccc
Confidence 999999986 89999999999 8999999999999999999999999888877
Q ss_pred ccch----hHHHHHHHHHHHHHHHHhhheeecCcCCc--c----chhHHHHHHHHhhhhcccCCcchHHHHHHHHHHHHH
Q 003952 395 TANS----WESGLFILFLVVFAVIAAGYVLKKGMEDP--T----RSKYKLFLSCSLIITSVIPPELPMELSIAVNTSLIA 464 (784)
Q Consensus 395 ~~~~----~~~~~fi~~ll~~aii~~~~~~~~~~~~~--~----~~~~~~~l~~i~ii~~~vP~~Lp~~lslav~~s~~~ 464 (784)
.+.| +.+.+|.+++++++++.+..|+..+.... . ..+...|..++.+++++|||+|.++.+.|+..+...
T Consensus 483 apiQq~aDkia~yFvP~Vi~lS~~t~~~w~~~g~~~~~~~~~~~~~~~~a~~~aisVlviACPCaLgLATPtAvmvatgv 562 (951)
T KOG0207|consen 483 APIQQLADKIAGYFVPVVIVLSLATFVVWILIGKIVFKYPRSFFDAFSHAFQLAISVLVIACPCALGLATPTAVMVATGV 562 (951)
T ss_pred chHHHHHHHhhhcCCchhhHHHHHHHHHHHHHccccccCcchhhHHHHHHHHhhheEEEEECchhhhcCCceEEEEEech
Confidence 7654 45677888888888877766655543211 1 233445667788899999999999999999999999
Q ss_pred HHhcCceecCCCCcCcCCceeEEEecccCcccCCceEEEEEEecCCCccccCCCCCcHHHHHHHHhccceEeeCCcccCC
Q 003952 465 LARRGIFCTEPFRIPFAGKVDMCCFDKTGTLTSDDMEFRGVVGLSNAELEDDMTKVPVRTQEILASCHALVFVDNKLVGD 544 (784)
Q Consensus 465 l~k~~I~~~~~~~ie~lG~vd~icfDKTGTLT~~~m~v~~i~~~~~~~~~~~~~~~~~~~~~~la~chsl~~~~~~~~gd 544 (784)
.+++||++|+.+.+|.+.+|+++.||||||||+|++.|..+....+. .+.. .+++...+.+ .-+.|
T Consensus 563 gA~nGvLIKGge~LE~~hkv~tVvFDKTGTLT~G~~~V~~~~~~~~~--------~~~~--e~l~~v~a~E----s~SeH 628 (951)
T KOG0207|consen 563 GATNGVLIKGGEALEKAHKVKTVVFDKTGTLTEGKPTVVDFKSLSNP--------ISLK--EALALVAAME----SGSEH 628 (951)
T ss_pred hhhcceEEcCcHHHHHHhcCCEEEEcCCCceecceEEEEEEEecCCc--------ccHH--HHHHHHHHHh----cCCcC
Confidence 99999999999999999999999999999999999999999877652 1122 2222222222 22579
Q ss_pred HHHHHHHhccCccccCCCccccCCCCCcceeEEEEEccCCCCCeeEEEEEECCEEEEEEeCchHHHHHhhccCchhHHHH
Q 003952 545 PLEKAALKGIDWSYKSDEKAMPKRGGGNAVQIVQRHHFASHLKRMSVVVRVQEEFFAFVKGAPETIQDRLTDLPSSYIET 624 (784)
Q Consensus 545 ple~All~~~~~~~~~~~~~~~~~~~~~~~~il~~~~Fss~~krmsviv~~~~~~~~~~KGapE~I~~~~~~~p~~~~~~ 624 (784)
|+.+|+.+++.-...... ...+...-.|..+.+. +-+...++ ..+.|+-|++...-..+|++.++.
T Consensus 629 Pig~AIv~yak~~~~~~~----------~~~~~~~~~~pg~g~~--~~~~~~~~--~i~iGN~~~~~r~~~~~~~~i~~~ 694 (951)
T KOG0207|consen 629 PIGKAIVDYAKEKLVEPN----------PEGVLSFEYFPGEGIY--VTVTVDGN--EVLIGNKEWMSRNGCSIPDDILDA 694 (951)
T ss_pred chHHHHHHHHHhcccccC----------ccccceeecccCCCcc--cceEEeee--EEeechHHHHHhcCCCCchhHHHh
Confidence 999999998853321100 1111122222222222 22333333 377899999999888889999999
Q ss_pred HHHHhhccCeEEEEEEEeCCCCChhhHhhhhhhhccCCcEEEEEEeecCCCCcchHHHHHHHhhCCCcEEEEcCCCHHHH
Q 003952 625 YKKYTHQGSRVLALAFKSLPDMTVSDARSLHRDEVENGLTFAGFAVFNCPIREDSAKILSELKNSSQDLAMITGDQALTA 704 (784)
Q Consensus 625 ~~~~~~~G~Rvlala~k~l~~~~~~~~~~~~r~~~E~~l~flG~l~~~d~lr~da~~~I~~L~~agi~v~MITGDn~~TA 704 (784)
+++..++|+.+.+++ .|.+++|++.++|++|||+..+|+.||+.|++++|+||||..||
T Consensus 695 ~~~~e~~g~tvv~v~---------------------vn~~l~gv~~l~D~vr~~a~~av~~Lk~~Gi~v~mLTGDn~~aA 753 (951)
T KOG0207|consen 695 LTESERKGQTVVYVA---------------------VNGQLVGVFALEDQVRPDAALAVAELKSMGIKVVMLTGDNDAAA 753 (951)
T ss_pred hhhHhhcCceEEEEE---------------------ECCEEEEEEEeccccchhHHHHHHHHHhcCceEEEEcCCCHHHH
Confidence 999999999999999 57799999999999999999999999999999999999999999
Q ss_pred HHHHHHcccccCCcEEEecCCCCCeeEEeCCCcccccccchhhhhccCCC-eeEEEechhHHH
Q 003952 705 CYVASQVHIVTKPVLILCPVKNGKVYEWVSPDETEKIQYSEKEVEGLTDA-HDLCIGGDCFEM 766 (784)
Q Consensus 705 ~~VA~~~gI~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~l~~tGd~l~~ 766 (784)
.++|+++||.+....+++.+ |.+.+++++++ +.++|+|||+|+
T Consensus 754 ~svA~~VGi~~V~aev~P~~-------------------K~~~Ik~lq~~~~~VaMVGDGIND 797 (951)
T KOG0207|consen 754 RSVAQQVGIDNVYAEVLPEQ-------------------KAEKIKEIQKNGGPVAMVGDGIND 797 (951)
T ss_pred HHHHHhhCcceEEeccCchh-------------------hHHHHHHHHhcCCcEEEEeCCCCc
Confidence 99999999766666665433 44566777766 459999999994
No 32
>KOG0206 consensus P-type ATPase [General function prediction only]
Probab=100.00 E-value=4.6e-50 Score=475.48 Aligned_cols=573 Identities=21% Similarity=0.300 Sum_probs=374.7
Q ss_pred HHhcCCCCccCCCCccHHHHH----HHHhhhhHHHHHHHhhhhcccc---hhhhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 003952 174 ATEKWGRNVFEYPQPTFQKLM----KENCMEPFFVFQVFCVGLWCLD---EYWYYSLFTLFMLFMFESTMAKSRLKTLTE 246 (784)
Q Consensus 174 ~~~~yG~N~~~~~~~s~~~ll----~~~~~~pf~vfqi~~~~lw~l~---~y~~~~~~~l~~l~~~~~~~~~~~~~~~~~ 246 (784)
+...|-.|.+...+.+++.++ ++||..+-++|.++..+|.+.. -.++.+++ .++++...+.++......++
T Consensus 28 ~~~~~~~N~i~TtKYt~~tFlPk~l~eQf~r~aN~yFl~~~il~~ip~~~~~~~~~~~--pl~~vl~~t~iKd~~eD~rR 105 (1151)
T KOG0206|consen 28 PQRKYCDNRISTTKYTLFTFLPKNLFEQFHRVANLYFLFIAILQFIPLSPFNPYTTLV--PLLFVLGITAIKDAIEDYRR 105 (1151)
T ss_pred hhccccCCeeEEEeccchhhhHHHHHHHHHHHHHHHHHHHHHHHcCcccccCccceee--ceeeeehHHHHHHHHhhhhh
Confidence 455899999999888766655 4555555566666555554443 11222222 23334444555554444433
Q ss_pred HHhhhh-CCceEEEEEcCe-EEEeecCCCCCCcEEEEcCCCCCCCCCCeecceeeEee-----CeeEeeccCCCCCCcce
Q 003952 247 IRRVRV-DNQTIMVHRCGK-WVKLAGTDLVPGDVVSIGRSSGQTGEDKSVPADMLILG-----GSAIVNEAILTGESTPQ 319 (784)
Q Consensus 247 l~~~~~-~~~~v~V~R~g~-~~~I~s~~LvpGDiV~i~~ge~d~~~~~~vPaD~ill~-----G~~~VdES~LTGES~Pv 319 (784)
-+.... ++.+++|+|++. +++..|++|++||+|.+..++ .+|||.+||+ |.|+|++++|.||+...
T Consensus 106 ~~~D~~iN~~~~~v~~~~~~~~~~~wk~~~vGd~v~v~~~~-------~~paD~llLsss~~~~~cyveT~nLDGEtnLK 178 (1151)
T KOG0206|consen 106 HKQDKEVNNRKVEVLRGDGCFVEKKWKDVRVGDIVRVEKDE-------FVPADLLLLSSSDEDGICYVETANLDGETNLK 178 (1151)
T ss_pred hhccHHhhcceeEEecCCceeeeeccceeeeeeEEEeccCC-------ccccceEEecCCCCCceeEEEEeecCCccccc
Confidence 333332 677899999644 899999999999999999665 9999999995 77999999999999999
Q ss_pred eeccccCCCCc---c-ccccc---------------------------cCCCeeEEeeeeEeecCCCCCcCCCCCCCceE
Q 003952 320 WKVSIMGRETG---E-KLSAR---------------------------RDKSHVLFGGTKILQHTPDKTFPLKTPDGGCL 368 (784)
Q Consensus 320 ~K~~~~~~~~~---~-~~~~~---------------------------~~~~~~lf~GT~v~~~~~~~~~~~~~~~g~~~ 368 (784)
.|.+++..... + ..+.+ ....+++..|+++.. ...+.
T Consensus 179 ~k~~l~~~~~~~~~~~~~~~~~~i~cE~p~~~ly~f~g~l~~~~~~~pl~~~~~Llrg~~lrN------------T~~v~ 246 (1151)
T KOG0206|consen 179 VKQALECTSKLDSEDSLKNFKGWIECEDPNANLYTFVGNLELQGQIYPLSPDNLLLRGSRLRN------------TEWVY 246 (1151)
T ss_pred eeeehhhhhcccccccccccCCceEEcCCcccHhhhhhheeeccCCCCCcHHHcccCCceecc------------CcEEE
Confidence 99986542210 0 00000 012344445555442 57899
Q ss_pred EEEEeeccccchhHHHHHhcccccccccchhHHHHHHH----HHHHHHHHH---hhheeecC--------cCCcc---ch
Q 003952 369 AVVLRTGFETSQGKLMRTILFSTERVTANSWESGLFIL----FLVVFAVIA---AGYVLKKG--------MEDPT---RS 430 (784)
Q Consensus 369 ~~V~~TG~~T~~gkl~~~i~~~~~~~~~~~~~~~~fi~----~ll~~aii~---~~~~~~~~--------~~~~~---~~ 430 (784)
++|+.||.+| |+++....+..+.+...+....++. +++.++++. .+++.... +..+. ..
T Consensus 247 G~vv~tG~dt---K~~~n~~~~~~Krs~ier~~n~~i~~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (1151)
T KOG0206|consen 247 GVVVFTGHDT---KLMQNSGKPPSKRSRIERKMNKIIILLFVLLILMCLISAIGFAIWTRQDGRHNGEWWYLSPSEAAYA 323 (1151)
T ss_pred EEEEEcCCcc---hHHHhcCCCccccchhhhhhhhhHHHHHHHHHHHHHHHHhhhheeeeecccccCchhhhcCchHHHH
Confidence 9999999999 5555444444444443333322221 112222221 12221110 00001 12
Q ss_pred hHHHHHHHHhhhhcccCCcchHHHHHHHHHHHH------HHH----hcCceecCCCCcCcCCceeEEEecccCcccCCce
Q 003952 431 KYKLFLSCSLIITSVIPPELPMELSIAVNTSLI------ALA----RRGIFCTEPFRIPFAGKVDMCCFDKTGTLTSDDM 500 (784)
Q Consensus 431 ~~~~~l~~i~ii~~~vP~~Lp~~lslav~~s~~------~l~----k~~I~~~~~~~ie~lG~vd~icfDKTGTLT~~~m 500 (784)
.+..++..+.++..++|.+|.+.+.+.-..... .|. .....|+..+--|.+|+|+++..|||||||+|.|
T Consensus 324 ~~~~f~t~~il~~~liPISLyvsiEiik~~qs~fi~~D~~my~~e~d~~~~~rtsnl~eeLGqv~yIfSDKTGTLT~N~M 403 (1151)
T KOG0206|consen 324 GFVHFLTFIILYQYLIPISLYVSIEIVKVLQSIFINNDLDMYDEETDTPAQARTSNLNEELGQVEYIFSDKTGTLTQNSM 403 (1151)
T ss_pred HHHHHHHHHhhhhceEEEEEEEEeeehHHHHHHHcchHHHhhhccCCCccccccCCchhhhcceeEEEEcCcCcccccee
Confidence 234466777888899999999876554332221 222 3457788888889999999999999999999999
Q ss_pred EEEEEEecCCC------c----cc-----------------cC------------CCCCcHHHHHHHHhccceEeeC-Cc
Q 003952 501 EFRGVVGLSNA------E----LE-----------------DD------------MTKVPVRTQEILASCHALVFVD-NK 540 (784)
Q Consensus 501 ~v~~i~~~~~~------~----~~-----------------~~------------~~~~~~~~~~~la~chsl~~~~-~~ 540 (784)
++......+.. + .. .+ ..........++|.||+..... ++
T Consensus 404 ~F~kCsi~g~~yg~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~f~~~la~chtv~~e~~~~ 483 (1151)
T KOG0206|consen 404 EFKKCSINGTSYGRNVTEVEAALAKRSGGDVNEHKIKGFTFEDSRLVDGLWSSEPQAEDILEFFRALALCHTVIPEKDED 483 (1151)
T ss_pred eeecccccCcccccCCChhhcccCccccccccccccccceeccchhhccccccccCcchHHHHhhHHhccceeeeccCCC
Confidence 99976543211 0 00 00 0011124578999999998543 21
Q ss_pred ------ccCCHHHHHHHhcc---CccccCCC---ccccCCCCCcceeEEEEEccCCCCCeeEEEEEECC-EEEEEEeCch
Q 003952 541 ------LVGDPLEKAALKGI---DWSYKSDE---KAMPKRGGGNAVQIVQRHHFASHLKRMSVVVRVQE-EFFAFVKGAP 607 (784)
Q Consensus 541 ------~~gdple~All~~~---~~~~~~~~---~~~~~~~~~~~~~il~~~~Fss~~krmsviv~~~~-~~~~~~KGap 607 (784)
...+|.|.|+++++ +..+-... ......+....+++++..+|+|.|||||||++.++ +..++||||+
T Consensus 484 ~~~~~Y~A~SPDE~AlV~aAr~~gf~f~~Rt~~~vti~~~g~~~~y~lL~iLeF~S~RKRMSVIVR~p~g~i~LycKGAD 563 (1151)
T KOG0206|consen 484 SGKLSYEAESPDEAALVEAARELGFVFLGRTPDSVTIRELGVEETYELLNVLEFNSTRKRMSVIVRDPDGRILLYCKGAD 563 (1151)
T ss_pred ccceeeecCCCcHHHHHHHHHhcCceeeeccCceEEEeccccceeEEEEEEeccccccceeEEEEEcCCCcEEEEEcCcc
Confidence 24689999999865 33322111 11122334568999999999999999999999976 8999999999
Q ss_pred HHHHHhhcc----CchhHHHHHHHHhhccCeEEEEEEEeCCCCChhhHhhh---------hh--------hhccCCcEEE
Q 003952 608 ETIQDRLTD----LPSSYIETYKKYTHQGSRVLALAFKSLPDMTVSDARSL---------HR--------DEVENGLTFA 666 (784)
Q Consensus 608 E~I~~~~~~----~p~~~~~~~~~~~~~G~Rvlala~k~l~~~~~~~~~~~---------~r--------~~~E~~l~fl 666 (784)
..|.+++.. .-+.-.+.+++|+.+|+|+|++|||++++.+++++.+. +| +.+|+||+++
T Consensus 564 svI~erL~~~~~~~~e~T~~Hl~~yA~eGLRTLc~A~r~l~e~eY~~w~~~~~~A~ts~~~Re~~L~e~ae~iEk~L~LL 643 (1151)
T KOG0206|consen 564 SVIFERLSKNGEKLREKTQEHLEEYATEGLRTLCLAYRELDEEEYEEWNERYNEAKTSLTDREELLDEVAEEIEKDLILL 643 (1151)
T ss_pred hhhHhhhhhcchHHHHHHHHHHHHHHhhhhhHhhhhhhccCHHHHHHHHHHHHHHHhhccCHHHHHHHHHHHHHhcchhh
Confidence 999999963 22333457899999999999999999987766544321 22 5689999999
Q ss_pred EEEeecCCCCcchHHHHHHHhhCCCcEEEEcCCCHHHHHHHHHHcccccCCcEEEecCCCCCeeEEeCCCccc----ccc
Q 003952 667 GFAVFNCPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLILCPVKNGKVYEWVSPDETE----KIQ 742 (784)
Q Consensus 667 G~l~~~d~lr~da~~~I~~L~~agi~v~MITGDn~~TA~~VA~~~gI~~~~~~il~~~~~~~~~~~~~~~~~~----~~~ 742 (784)
|..++||+|+++++++|+.|++|||++||+|||..+||++||..|+++++....+.-...+.. .-...+... .+.
T Consensus 644 GATAIEDkLQdgVPetI~~L~~AGIKIWVLTGDK~ETAiNIg~sC~Ll~~~m~~i~i~~~~~~-~~~~~~~~~~~~~~l~ 722 (1151)
T KOG0206|consen 644 GATAIEDKLQDGVPETIAKLAQAGIKIWVLTGDKQETAINIGYSCRLLRQDMKLIIINTETSE-ELSSLDATAALKETLL 722 (1151)
T ss_pred cceeeechhccCchHHHHHHHHcCCEEEEEcCcHHHHHHHHHHhhcCCCCCceEEEEecCChh-hhcchhhHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999654333211111110 111111100 000
Q ss_pred --cch--hh-hhccC-CCeeEEEechhHHHHhcCc
Q 003952 743 --YSE--KE-VEGLT-DAHDLCIGGDCFEMLQQTS 771 (784)
Q Consensus 743 --~~~--~~-~~~l~-~~~~l~~tGd~l~~l~~~~ 771 (784)
.+. .. ..... +...++++|+.+.++++.+
T Consensus 723 ~~~~~~~~~~~~~~~~~~~aLVIDGktl~~aL~~~ 757 (1151)
T KOG0206|consen 723 RKFTEELEEAKLEHSEKPFALVIDGKTLAYALEDE 757 (1151)
T ss_pred HhhhHHHHHHhhccCcCCceEEEECHHHHhhhCch
Confidence 000 00 01111 3577999999999999874
No 33
>COG2216 KdpB High-affinity K+ transport system, ATPase chain B [Inorganic ion transport and metabolism]
Probab=100.00 E-value=3.5e-43 Score=374.15 Aligned_cols=417 Identities=18% Similarity=0.200 Sum_probs=302.5
Q ss_pred HHHHhhhhCCceEEEEEc-CeEEEeecCCCCCCcEEEEcCCCCCCCCCCeecceeeEeeCeeEeeccCCCCCCcceeecc
Q 003952 245 TEIRRVRVDNQTIMVHRC-GKWVKLAGTDLVPGDVVSIGRSSGQTGEDKSVPADMLILGGSAIVNEAILTGESTPQWKVS 323 (784)
Q Consensus 245 ~~l~~~~~~~~~v~V~R~-g~~~~I~s~~LvpGDiV~i~~ge~d~~~~~~vPaD~ill~G~~~VdES~LTGES~Pv~K~~ 323 (784)
..||+.+. ...++++++ |.++.+++.+|..||+|.|..|| .||+||.+++|.+.||||.+||||-||.|++
T Consensus 95 dsLr~~~~-~~~A~~l~~~g~~~~v~st~Lk~gdiV~V~age-------~IP~DGeVIeG~asVdESAITGESaPVires 166 (681)
T COG2216 95 DSLRKTKT-ETIARLLRADGSIEMVPATELKKGDIVLVEAGE-------IIPSDGEVIEGVASVDESAITGESAPVIRES 166 (681)
T ss_pred HHHHHHHH-HHHHHHhcCCCCeeeccccccccCCEEEEecCC-------CccCCCeEEeeeeecchhhccCCCcceeecc
Confidence 45665543 334566665 89999999999999999999887 9999999999999999999999999999997
Q ss_pred ccCCCCccccccccCCCeeEEeeeeEeecCCCCCcCCCCCCCceEEEEEeeccccchhHHHHHhcccccccccchhHHHH
Q 003952 324 IMGRETGEKLSARRDKSHVLFGGTKILQHTPDKTFPLKTPDGGCLAVVLRTGFETSQGKLMRTILFSTERVTANSWESGL 403 (784)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~lf~GT~v~~~~~~~~~~~~~~~g~~~~~V~~TG~~T~~gkl~~~i~~~~~~~~~~~~~~~~ 403 (784)
-. | .+-+-+||.++ +.+.+..++..--+|..-|++.++.-++.+++||......
T Consensus 167 Gg------------D-~ssVtGgT~v~-------------SD~l~irita~pG~sFlDrMI~LVEgA~R~KTPNEIAL~i 220 (681)
T COG2216 167 GG------------D-FSSVTGGTRVL-------------SDWLKIRITANPGETFLDRMIALVEGAERQKTPNEIALTI 220 (681)
T ss_pred CC------------C-cccccCCcEEe-------------eeeEEEEEEcCCCccHHHHHHHHhhchhccCChhHHHHHH
Confidence 21 2 24488999999 8999999999999999999999999888899998765544
Q ss_pred HHHHH-HHHHHH-HhhheeecCcCCccchhHHHHHHHHhhhhcccCCcchHHHHHHHHHHHHHHHhcCceecCCCCcCcC
Q 003952 404 FILFL-VVFAVI-AAGYVLKKGMEDPTRSKYKLFLSCSLIITSVIPPELPMELSIAVNTSLIALARRGIFCTEPFRIPFA 481 (784)
Q Consensus 404 fi~~l-l~~aii-~~~~~~~~~~~~~~~~~~~~~l~~i~ii~~~vP~~Lp~~lslav~~s~~~l~k~~I~~~~~~~ie~l 481 (784)
++..| ++|.++ +..|-+..... ..... +...+.++++.+|-....-++.-=..++.|+.+.+++-+++.++|.+
T Consensus 221 LL~~LTliFL~~~~Tl~p~a~y~~--g~~~~--i~~LiALlV~LIPTTIGgLLsAIGIAGMdRv~~~NViA~SGRAVEaa 296 (681)
T COG2216 221 LLSGLTLIFLLAVATLYPFAIYSG--GGAAS--VTVLVALLVCLIPTTIGGLLSAIGIAGMDRVTQFNVIATSGRAVEAA 296 (681)
T ss_pred HHHHHHHHHHHHHHhhhhHHHHcC--CCCcC--HHHHHHHHHHHhcccHHHHHHHhhhhhhhHhhhhceeecCcchhhhc
Confidence 43322 222222 22222211110 11111 22234566677888877777665667788999999999999999999
Q ss_pred CceeEEEecccCcccCCceEEEEEEecCCCccccCCCCCcHHHHHHHHhccceEeeCCcccCCHHHHHHHhccC---ccc
Q 003952 482 GKVDMCCFDKTGTLTSDDMEFRGVVGLSNAELEDDMTKVPVRTQEILASCHALVFVDNKLVGDPLEKAALKGID---WSY 558 (784)
Q Consensus 482 G~vd~icfDKTGTLT~~~m~v~~i~~~~~~~~~~~~~~~~~~~~~~la~chsl~~~~~~~~gdple~All~~~~---~~~ 558 (784)
|.||++..|||||+|-|+=.-..+.+.++. ..+...-.|...|+ .|.. |--+.+++.++ ..+
T Consensus 297 GDvdtliLDKTGTIT~GnR~A~~f~p~~gv---------~~~~la~aa~lsSl--~DeT----pEGrSIV~LA~~~~~~~ 361 (681)
T COG2216 297 GDVDTLLLDKTGTITLGNRQASEFIPVPGV---------SEEELADAAQLASL--ADET----PEGRSIVELAKKLGIEL 361 (681)
T ss_pred CCccEEEecccCceeecchhhhheecCCCC---------CHHHHHHHHHHhhh--ccCC----CCcccHHHHHHHhccCC
Confidence 999999999999999998777777766542 11111112222233 2322 22233333221 111
Q ss_pred cCCCccccCCCCCcceeEEEEEccCCCCCeeEEEEEECCEEEEEEeCchHHHHHhhc----cCchhHHHHHHHHhhccCe
Q 003952 559 KSDEKAMPKRGGGNAVQIVQRHHFASHLKRMSVVVRVQEEFFAFVKGAPETIQDRLT----DLPSSYIETYKKYTHQGSR 634 (784)
Q Consensus 559 ~~~~~~~~~~~~~~~~~il~~~~Fss~~krmsviv~~~~~~~~~~KGapE~I~~~~~----~~p~~~~~~~~~~~~~G~R 634 (784)
..++. . ..-.-.||+++.+.+++ -..++ ..+.|||++.++.... ++|+++++.+++-++.|-.
T Consensus 362 ~~~~~--------~--~~~~fvpFtA~TRmSGv-d~~~~--~~irKGA~dai~~~v~~~~g~~p~~l~~~~~~vs~~GGT 428 (681)
T COG2216 362 REDDL--------Q--SHAEFVPFTAQTRMSGV-DLPGG--REIRKGAVDAIRRYVRERGGHIPEDLDAAVDEVSRLGGT 428 (681)
T ss_pred Ccccc--------c--ccceeeecceecccccc-cCCCC--ceeecccHHHHHHHHHhcCCCCCHHHHHHHHHHHhcCCC
Confidence 11110 0 01245699887655443 33233 4788999999998874 4899999999999999999
Q ss_pred EEEEEEEeCCCCChhhHhhhhhhhccCCcEEEEEEeecCCCCcchHHHHHHHhhCCCcEEEEcCCCHHHHHHHHHHcccc
Q 003952 635 VLALAFKSLPDMTVSDARSLHRDEVENGLTFAGFAVFNCPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIV 714 (784)
Q Consensus 635 vlala~k~l~~~~~~~~~~~~r~~~E~~l~flG~l~~~d~lr~da~~~I~~L~~agi~v~MITGDn~~TA~~VA~~~gI~ 714 (784)
.|+++ .|..++|.+.++|-+||+.+|-+.+||++|||++|+||||+.||..||+|.|+.
T Consensus 429 PL~V~---------------------~~~~~~GVI~LkDivK~Gi~ERf~elR~MgIkTvM~TGDN~~TAa~IA~EAGVD 487 (681)
T COG2216 429 PLVVV---------------------ENGRILGVIYLKDIVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAAEAGVD 487 (681)
T ss_pred ceEEE---------------------ECCEEEEEEEehhhcchhHHHHHHHHHhcCCeEEEEeCCCHHHHHHHHHHhCch
Confidence 99998 577999999999999999999999999999999999999999999999999997
Q ss_pred cCCcEEEecCCCCCeeEEeCCCcccccccchhhhhccCCCee-EEEechhHHHH
Q 003952 715 TKPVLILCPVKNGKVYEWVSPDETEKIQYSEKEVEGLTDAHD-LCIGGDCFEML 767 (784)
Q Consensus 715 ~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-l~~tGd~l~~l 767 (784)
+.-.+..+++ |.+.+++.|.+++ ++|+|||=|..
T Consensus 488 dfiAeatPEd-------------------K~~~I~~eQ~~grlVAMtGDGTNDA 522 (681)
T COG2216 488 DFIAEATPED-------------------KLALIRQEQAEGRLVAMTGDGTNDA 522 (681)
T ss_pred hhhhcCChHH-------------------HHHHHHHHHhcCcEEEEcCCCCCcc
Confidence 6544433221 2334455555555 88999997654
No 34
>PF00122 E1-E2_ATPase: E1-E2 ATPase p-type cation-transporting ATPase superfamily signature H+-transporting ATPase (proton pump) signature sodium/potassium-transporting ATPase signature; InterPro: IPR008250 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane. ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the actuator (A) domain, and some transmembrane helices found in P-type ATPases []. It contains the TGES-loop which is essential for the metal ion binding which results in tight association between the A and P (phosphorylation) domains []. It does not contain the phosphorylation site. It is thought that the large movement of the actuator domain, which is transmitted to the transmembrane helices, is essential to the long distance coupling between formation/decomposition of the acyl phosphate in the cytoplasmic P-domain and the changes in the ion-binding sites buried deep in the membranous region []. This domain has a modulatory effect on the phosphoenzyme processing steps through its nucleotide binding [],[]. P-type (or E1-E2-type) ATPases that form an aspartyl phosphate intermediate in the course of ATP hydrolysis, can be divided into 4 major groups []: (1) Ca2+-transporting ATPases; (2) Na+/K+- and gastric H+/K+-transporting ATPases; (3) plasma membrane H+-transporting ATPases (proton pumps) of plants, fungi and lower eukaryotes; and (4) all bacterial P-type ATPases, except the g2+-ATPase of Salmonella typhimurium, which is more similar to the eukaryotic sequences. However, great variety of sequence analysis methods results in diversity of classification. More information about this protein can be found at Protein of the Month: ATP Synthases [].; GO: 0000166 nucleotide binding, 0046872 metal ion binding; PDB: 2XZB_A 1MHS_B 3TLM_A 3A3Y_A 2ZXE_A 3NAL_A 3NAM_A 3NAN_A 2YJ6_B 2IYE_A ....
Probab=100.00 E-value=1e-32 Score=286.16 Aligned_cols=219 Identities=25% Similarity=0.446 Sum_probs=171.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhh-CCce-EEEEEcCeEEEeecCCCCCCcEEEEcCCCCCCCCCCeecceeeEee-C
Q 003952 227 FMLFMFESTMAKSRLKTLTEIRRVRV-DNQT-IMVHRCGKWVKLAGTDLVPGDVVSIGRSSGQTGEDKSVPADMLILG-G 303 (784)
Q Consensus 227 ~~l~~~~~~~~~~~~~~~~~l~~~~~-~~~~-v~V~R~g~~~~I~s~~LvpGDiV~i~~ge~d~~~~~~vPaD~ill~-G 303 (784)
+++++......+++.|+.+.++++.. .+.. +.|+|||+|++++++||+|||+|.|++|+ .+||||+|++ |
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~r~~~~~~i~~~~L~~GDiI~l~~g~-------~vPaD~~ll~~g 76 (230)
T PF00122_consen 4 FLILLSNIIEIWQEYRSKKQLKKLNNLNPQKKVTVIRDGRWQKIPSSELVPGDIIILKAGD-------IVPADGILLESG 76 (230)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHCTTSSSEEEEEEETTEEEEEEGGGT-TTSEEEEETTE-------BESSEEEEEESS
T ss_pred EEhHHHHHHHHHHHHHHHHHHHHHhccCCCccEEEEeccccccchHhhccceeeeeccccc-------ccccCccceecc
Confidence 34444444555666666677766654 3444 99999999999999999999999999877 9999999999 9
Q ss_pred eeEeeccCCCCCCcceeeccccCCCCccccccccCCCeeEEeeeeEeecCCCCCcCCCCCCCceEEEEEeeccccchhHH
Q 003952 304 SAIVNEAILTGESTPQWKVSIMGRETGEKLSARRDKSHVLFGGTKILQHTPDKTFPLKTPDGGCLAVVLRTGFETSQGKL 383 (784)
Q Consensus 304 ~~~VdES~LTGES~Pv~K~~~~~~~~~~~~~~~~~~~~~lf~GT~v~~~~~~~~~~~~~~~g~~~~~V~~TG~~T~~gkl 383 (784)
.+.||||.||||+.|+.|.+. ..+.++++|+||.+. +|++.++|++||.+|..|++
T Consensus 77 ~~~vd~s~ltGes~pv~k~~~-----------~~~~~~~i~~Gs~v~-------------~g~~~~~Vi~tG~~t~~~~~ 132 (230)
T PF00122_consen 77 SAYVDESALTGESEPVKKTPL-----------PLNPGNIIFAGSIVV-------------SGWGIGVVIATGSDTKLGRI 132 (230)
T ss_dssp EEEEECHHHHSBSSEEEESSS-----------CCCTTTEE-TTEEEE-------------EEEEEEEEEE-GGGSHHHHH
T ss_pred ccccccccccccccccccccc-----------cccccchhhcccccc-------------ccccccccceeeeccccccc
Confidence 999999999999999999963 123599999999999 79999999999999999999
Q ss_pred HHHhcccccccccchhHHHHHHHHHH----HHHHHHhhheeecCcCCccchhHHHHHHHHhhhhcccCCcchHHHHHHHH
Q 003952 384 MRTILFSTERVTANSWESGLFILFLV----VFAVIAAGYVLKKGMEDPTRSKYKLFLSCSLIITSVIPPELPMELSIAVN 459 (784)
Q Consensus 384 ~~~i~~~~~~~~~~~~~~~~fi~~ll----~~aii~~~~~~~~~~~~~~~~~~~~~l~~i~ii~~~vP~~Lp~~lslav~ 459 (784)
.+.+..+..+.++.++....+...++ +++++...+++.. +...++...+..++.+++.++|++||++++++..
T Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~i~~l~~~~P~~l~~~~~~~~~ 209 (230)
T PF00122_consen 133 LQLVSKSESKKSPLERKLNKIAKILIIIILAIAILVFIIWFFN---DSGISFFKSFLFAISLLIVLIPCALPLALPLSLA 209 (230)
T ss_dssp HHHHHTSCSS-THHHHHHHHHHHHHHHHHHHHHHHHHHHCHTG---STTCHCCHHHHHHHHHHHHHS-TTHHHHHHHHHH
T ss_pred ccccccccccchhhhhhhHHHHHHHHhcccccchhhhccceec---ccccccccccccccceeeeecccceeehHHHHHH
Confidence 99998777766666665554443332 3333222222221 2345677889999999999999999999999999
Q ss_pred HHHHHHHhcCceecCCCCcC
Q 003952 460 TSLIALARRGIFCTEPFRIP 479 (784)
Q Consensus 460 ~s~~~l~k~~I~~~~~~~ie 479 (784)
.+..+|+|+||+|+++.++|
T Consensus 210 ~~~~~~~~~~i~v~~~~a~E 229 (230)
T PF00122_consen 210 IAARRLAKNGIIVKNLSALE 229 (230)
T ss_dssp HHHHHHHHTTEEESSTTHHH
T ss_pred HHHHHHHHCCEEEeCccccc
Confidence 99999999999999999887
No 35
>PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase). This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J ....
Probab=99.73 E-value=1.6e-18 Score=177.18 Aligned_cols=206 Identities=27% Similarity=0.361 Sum_probs=130.0
Q ss_pred eeEEEecccCcccCCceEEEEEEecCCCccccCCCCCcHHHHHHHHhccceEeeCCcccCCHHHHHHHhccCccccCCCc
Q 003952 484 VDMCCFDKTGTLTSDDMEFRGVVGLSNAELEDDMTKVPVRTQEILASCHALVFVDNKLVGDPLEKAALKGIDWSYKSDEK 563 (784)
Q Consensus 484 vd~icfDKTGTLT~~~m~v~~i~~~~~~~~~~~~~~~~~~~~~~la~chsl~~~~~~~~gdple~All~~~~~~~~~~~~ 563 (784)
|+++|||||||||++++.+ ... ....++..+.... ..+.||+..++..+....... .
T Consensus 1 i~~i~fDktGTLt~~~~~v---~~~--------------~~~~~~~~~~~~~----~~s~~p~~~~~~~~~~~~~~~-~- 57 (215)
T PF00702_consen 1 IDAICFDKTGTLTQGKMSV---APP--------------SNEAALAIAAALE----QGSEHPIGKAIVEFAKNHQWS-K- 57 (215)
T ss_dssp ESEEEEECCTTTBESHHEE---ESC--------------SHHHHHHHHHHHH----CTSTSHHHHHHHHHHHHHHHH-S-
T ss_pred CeEEEEecCCCcccCeEEE---Eec--------------cHHHHHHHHHHhh----hcCCCcchhhhhhhhhhccch-h-
Confidence 6899999999999999999 100 1112222222221 235699999998876421110 0
Q ss_pred cccCCCCCcceeEEEEEccCCCCCeeEEEEEECCEEEEEEeCchHHHHHhhccCchhHHHHHHHHhhccCeEEEEEEEeC
Q 003952 564 AMPKRGGGNAVQIVQRHHFASHLKRMSVVVRVQEEFFAFVKGAPETIQDRLTDLPSSYIETYKKYTHQGSRVLALAFKSL 643 (784)
Q Consensus 564 ~~~~~~~~~~~~il~~~~Fss~~krmsviv~~~~~~~~~~KGapE~I~~~~~~~p~~~~~~~~~~~~~G~Rvlala~k~l 643 (784)
+ .. +|.....+ +......+. +. |+++.+.+..... ............+|.+++.++
T Consensus 58 -----~----~~-----~~~~~~~~-~~~~~~~~~---~~-g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~---- 113 (215)
T PF00702_consen 58 -----S----LE-----SFSEFIGR-GISGDVDGI---YL-GSPEWIHELGIRV-ISPDLVEEIQESQGRTVIVLA---- 113 (215)
T ss_dssp -----C----CE-----EEEEETTT-EEEEEEHCH---EE-HHHHHHHHHHHHH-HHHHHHHHHHHHHHHHCEEEE----
T ss_pred -----h----hh-----hheeeeec-ccccccccc---cc-ccchhhhhccccc-cccchhhhHHHhhCCccccee----
Confidence 0 01 11111111 122222222 22 9999998876432 112222334466677777776
Q ss_pred CCCChhhHhhhhhhhccCCcEEEEEEeecCCCCcchHHHHHHHhhCCCcEEEEcCCCHHHHHHHHHHcccccCCcEEEec
Q 003952 644 PDMTVSDARSLHRDEVENGLTFAGFAVFNCPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLILCP 723 (784)
Q Consensus 644 ~~~~~~~~~~~~r~~~E~~l~flG~l~~~d~lr~da~~~I~~L~~agi~v~MITGDn~~TA~~VA~~~gI~~~~~~il~~ 723 (784)
.++.++|.+.+.|++||+++++|+.|+++|++++|+|||+..+|.++|+++||.+ ..+...
T Consensus 114 -----------------~~~~~~~~~~~~d~~~~~~~~~l~~L~~~Gi~~~i~TGD~~~~a~~~~~~lgi~~--~~v~a~ 174 (215)
T PF00702_consen 114 -----------------VNLIFLGLFGLRDPLRPGAKEALQELKEAGIKVAILTGDNESTASAIAKQLGIFD--SIVFAR 174 (215)
T ss_dssp -----------------ESHEEEEEEEEEEEBHTTHHHHHHHHHHTTEEEEEEESSEHHHHHHHHHHTTSCS--EEEEES
T ss_pred -----------------ecCeEEEEEeecCcchhhhhhhhhhhhccCcceeeeecccccccccccccccccc--cccccc
Confidence 3789999999999999999999999999999999999999999999999999932 112211
Q ss_pred CCCCCeeEEeCCCcccccccc--hhhhhccC-CCeeEEEechhHHHHh
Q 003952 724 VKNGKVYEWVSPDETEKIQYS--EKEVEGLT-DAHDLCIGGDCFEMLQ 768 (784)
Q Consensus 724 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~l~-~~~~l~~tGd~l~~l~ 768 (784)
. . -.++. + ...+++++ +...++|+||++|.+.
T Consensus 175 ~-----~--~kP~~------k~~~~~i~~l~~~~~~v~~vGDg~nD~~ 209 (215)
T PF00702_consen 175 V-----I--GKPEP------KIFLRIIKELQVKPGEVAMVGDGVNDAP 209 (215)
T ss_dssp H-----E--TTTHH------HHHHHHHHHHTCTGGGEEEEESSGGHHH
T ss_pred c-----c--ccccc------hhHHHHHHHHhcCCCEEEEEccCHHHHH
Confidence 1 0 01111 2 23455666 4557999999999874
No 36
>PF13246 Hydrolase_like2: Putative hydrolase of sodium-potassium ATPase alpha subunit
Probab=99.25 E-value=5.3e-12 Score=110.79 Aligned_cols=85 Identities=36% Similarity=0.463 Sum_probs=62.1
Q ss_pred HhccceEeeCC------cccCCHHHHHHHhccCccccCCCccccCCCCCcceeEEEEEccCCCCCeeEEEEEECCEEEEE
Q 003952 529 ASCHALVFVDN------KLVGDPLEKAALKGIDWSYKSDEKAMPKRGGGNAVQIVQRHHFASHLKRMSVVVRVQEEFFAF 602 (784)
Q Consensus 529 a~chsl~~~~~------~~~gdple~All~~~~~~~~~~~~~~~~~~~~~~~~il~~~~Fss~~krmsviv~~~~~~~~~ 602 (784)
+.||+.....+ +.+|||+|.|++.++.+.-.... .......+++++.+||+|++|||+|+++.++.++++
T Consensus 1 ~LCn~a~~~~~~~~~~~~~~G~ptE~ALl~~~~~~g~~~~----~~~~~~~~~~~~~~pF~S~rK~msvv~~~~~~~~~~ 76 (91)
T PF13246_consen 1 ALCNDAEIEYDDESKTEEIIGDPTEKALLRFAKKLGVGID----IKEIRSKYKIVAEIPFDSERKRMSVVVRNDGKYILY 76 (91)
T ss_pred CCccccEeecCCCCccccccCCcCHHHHHHHHHHcCCCCc----HHHHHhhcceeEEEccCcccceeEEEEeCCCEEEEE
Confidence 35777764211 27899999999998753211000 112235688999999999999999999933456779
Q ss_pred EeCchHHHHHhhccC
Q 003952 603 VKGAPETIQDRLTDL 617 (784)
Q Consensus 603 ~KGapE~I~~~~~~~ 617 (784)
+|||||.|+++|+.+
T Consensus 77 ~KGA~e~il~~Ct~i 91 (91)
T PF13246_consen 77 VKGAPEVILDRCTHI 91 (91)
T ss_pred cCCChHHHHHhcCCC
Confidence 999999999999753
No 37
>PF00690 Cation_ATPase_N: Cation transporter/ATPase, N-terminus; InterPro: IPR004014 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane. ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the conserved N-terminal region found in several classes of cation-transporting P-type ATPases, including those that transport H+ (3.6.3.6 from EC), Na+ (3.6.3.7 from EC), Ca2+ (3.6.3.8 from EC), Na+/K+ (3.6.3.9 from EC), and H+/K+ (3.6.3.10 from EC). In the H+/K+- and Na+/K+-exchange P-ATPases, this domain is found in the catalytic alpha chain. In gastric H+/K+-ATPases, this domain undergoes reversible sequential phosphorylation inducing conformational changes that may be important for regulating the function of these ATPases [, ]. More information about this protein can be found at Protein of the Month: ATP Synthases [].; PDB: 3KDP_C 3N2F_A 3B8E_A 3N23_A 2XZB_A 1MHS_B 3A3Y_A 2ZXE_A 3B8C_A 3B9B_A ....
Probab=98.55 E-value=9.1e-08 Score=79.45 Aligned_cols=61 Identities=13% Similarity=0.292 Sum_probs=51.6
Q ss_pred Cchhhhhhh-hcCCCCCHHHHHHHHhcCCCCccCCC-CccHHHHHHHHhhhhHHHHHHHhhhh
Q 003952 152 TKETFGYYL-KCTGHSTEAKIAVATEKWGRNVFEYP-QPTFQKLMKENCMEPFFVFQVFCVGL 212 (784)
Q Consensus 152 ~~~~~~~~~-~~~g~l~~~~v~~~~~~yG~N~~~~~-~~s~~~ll~~~~~~pf~vfqi~~~~l 212 (784)
.++.++.+. ....||+++|+++|+++||+|+++.+ .++++.+|.+++.+||+++++++.++
T Consensus 6 ~~~v~~~l~t~~~~GLs~~ev~~r~~~~G~N~l~~~~~~s~~~~~~~~f~~~~~~lL~~aail 68 (69)
T PF00690_consen 6 VEEVLKRLNTSSSQGLSSEEVEERRKKYGPNELPEPKKKSLWRIFLKQFKNPFIILLLIAAIL 68 (69)
T ss_dssp HHHHHHHHTTBTSSBBTHHHHHHHHHHHSSSSTTTTTSSSHHHHHHHHTTSHHHHHHHHHHHH
T ss_pred HHHHHHHHCcCCCCCCCHHHHHHHHHhcccccccccccCcHHHHHHHHHHhHHHHHHHHHHHH
Confidence 456677776 34577899999999999999999654 57999999999999999999888765
No 38
>smart00831 Cation_ATPase_N Cation transporter/ATPase, N-terminus. This entry represents the conserved N-terminal region found in several classes of cation-transporting P-type ATPases, including those that transport H+, Na+, Ca2+, Na+/K+, and H+/K+. In the H+/K+- and Na+/K+-exchange P-ATPases, this domain is found in the catalytic alpha chain. In gastric H+/K+-ATPases, this domain undergoes reversible sequential phosphorylation inducing conformational changes that may be important for regulating the function of these ATPases PUBMED:12480547, PUBMED:12529322.
Probab=98.28 E-value=1.2e-06 Score=71.57 Aligned_cols=51 Identities=14% Similarity=0.134 Sum_probs=45.1
Q ss_pred CCCCHHHHHHHHhcCCCCccCCCC-ccHHHHHHHHhhhhHHHHHHHhhhhcc
Q 003952 164 GHSTEAKIAVATEKWGRNVFEYPQ-PTFQKLMKENCMEPFFVFQVFCVGLWC 214 (784)
Q Consensus 164 g~l~~~~v~~~~~~yG~N~~~~~~-~s~~~ll~~~~~~pf~vfqi~~~~lw~ 214 (784)
.|++++|+++|+++||+|+++.+. ++++.++.+++.+|+.++++++.++++
T Consensus 9 ~GLs~~~v~~r~~~~G~N~l~~~~~~s~~~~~l~~~~~p~~~iL~~~a~is~ 60 (64)
T smart00831 9 SGLSSEEAARRLERYGPNELPPPKKRSPLLRFLRQFHNPLIYILLAAAVLSA 60 (64)
T ss_pred cCCCHHHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence 367899999999999999998876 799999999999999998888776654
No 39
>PF12409 P5-ATPase: P5-type ATPase cation transporter
Probab=97.84 E-value=2.8e-05 Score=71.82 Aligned_cols=57 Identities=19% Similarity=0.139 Sum_probs=48.8
Q ss_pred hhHHHHHHHHHHHHhhcccccccceeEEeccCCCcCCCcEEEEEeCCCCCceeeEEeeee
Q 003952 53 IVLGGLVAFHILVWLFTAWSVDFKCFAHYSKINDIHLADACKITPVKFCGSKEVVPLQFW 112 (784)
Q Consensus 53 ~~~~~~~~~~~l~~l~~~w~~~~~~~~~~~~~~~~~~a~~~~v~~~~~~~~~~~~~~~~~ 112 (784)
++.++.++..|+++|++||+++++.+++|++| ++++||||+|+.. .|..++++++..
T Consensus 19 l~~~l~ilT~Gll~L~~~W~p~~~~~~~~~~c-~l~~A~~vlI~~~--~~~~~i~~v~~~ 75 (119)
T PF12409_consen 19 LYYFLCILTLGLLYLVFRWFPKWWLKLTFKKC-SLEEADHVLIEDQ--DGEYEIVKVQKI 75 (119)
T ss_pred HHHHHHHHHHHHHHHHHhhHHHhheeeeEeEC-CHHHCcEEEEEeC--CCCEEEEEEEEE
Confidence 44455667889999999999999999999998 5999999999864 788999999753
No 40
>COG4087 Soluble P-type ATPase [General function prediction only]
Probab=95.98 E-value=0.013 Score=53.67 Aligned_cols=88 Identities=14% Similarity=0.128 Sum_probs=66.0
Q ss_pred cEEEEEEeecCCCCcchHHHHHHHhhCCCcEEEEcCCCHHHHHHHHHHcccccCCcEEEecCCCCCeeEEeCCCcccccc
Q 003952 663 LTFAGFAVFNCPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLILCPVKNGKVYEWVSPDETEKIQ 742 (784)
Q Consensus 663 l~flG~l~~~d~lr~da~~~I~~L~~agi~v~MITGDn~~TA~~VA~~~gI~~~~~~il~~~~~~~~~~~~~~~~~~~~~ 742 (784)
+...+.+.---+|=++++++|++|++. +++.+-|||..-+-...|+-+||.......- . + ..
T Consensus 19 ~~v~~tiatgGklf~ev~e~iqeL~d~-V~i~IASgDr~gsl~~lae~~gi~~~rv~a~--a------------~---~e 80 (152)
T COG4087 19 GKVLYTIATGGKLFSEVSETIQELHDM-VDIYIASGDRKGSLVQLAEFVGIPVERVFAG--A------------D---PE 80 (152)
T ss_pred ceEEEEEccCcEEcHhhHHHHHHHHHh-heEEEecCCcchHHHHHHHHcCCceeeeecc--c------------C---HH
Confidence 356677777778889999999999999 9999999999999999999999753211110 0 0 01
Q ss_pred cchhhhhccCCC-eeEEEechhHHHHh
Q 003952 743 YSEKEVEGLTDA-HDLCIGGDCFEMLQ 768 (784)
Q Consensus 743 ~~~~~~~~l~~~-~~l~~tGd~l~~l~ 768 (784)
.+.+.+.+|.+. +.++|+|+|.|..+
T Consensus 81 ~K~~ii~eLkk~~~k~vmVGnGaND~l 107 (152)
T COG4087 81 MKAKIIRELKKRYEKVVMVGNGANDIL 107 (152)
T ss_pred HHHHHHHHhcCCCcEEEEecCCcchHH
Confidence 144556677755 45889999999864
No 41
>COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=95.37 E-value=0.038 Score=56.50 Aligned_cols=50 Identities=14% Similarity=0.165 Sum_probs=45.1
Q ss_pred CCCCcchHHHHHHHhhCCCcEEEEcCCCHHHHHHHHHHcccccCCcEEEe
Q 003952 673 CPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLILC 722 (784)
Q Consensus 673 d~lr~da~~~I~~L~~agi~v~MITGDn~~TA~~VA~~~gI~~~~~~il~ 722 (784)
.+++|++.+.++.++++|++|++|||=...-+..+|+++|+.......+.
T Consensus 76 ~~l~~ga~elv~~lk~~G~~v~iiSgg~~~lv~~ia~~lg~d~~~an~l~ 125 (212)
T COG0560 76 LRLTPGAEELVAALKAAGAKVVIISGGFTFLVEPIAERLGIDYVVANELE 125 (212)
T ss_pred CcCCccHHHHHHHHHHCCCEEEEEcCChHHHHHHHHHHhCCchheeeEEE
Confidence 68899999999999999999999999999999999999999865555543
No 42
>KOG1615 consensus Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=95.37 E-value=0.036 Score=54.36 Aligned_cols=42 Identities=19% Similarity=0.214 Sum_probs=39.6
Q ss_pred CCCcchHHHHHHHhhCCCcEEEEcCCCHHHHHHHHHHccccc
Q 003952 674 PIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVT 715 (784)
Q Consensus 674 ~lr~da~~~I~~L~~agi~v~MITGDn~~TA~~VA~~~gI~~ 715 (784)
.+-|++++.++.|++.|.+|.+|||--..-+..||.++||..
T Consensus 88 ~lT~Gi~eLv~~L~~~~~~v~liSGGF~~~i~~Va~~Lgi~~ 129 (227)
T KOG1615|consen 88 TLTPGIRELVSRLHARGTQVYLISGGFRQLIEPVAEQLGIPK 129 (227)
T ss_pred ccCCCHHHHHHHHHHcCCeEEEEcCChHHHHHHHHHHhCCcH
Confidence 356999999999999999999999999999999999999984
No 43
>PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B.
Probab=95.08 E-value=0.024 Score=56.48 Aligned_cols=40 Identities=18% Similarity=0.323 Sum_probs=37.6
Q ss_pred cchHHHHHHHhhCCCcEEEEcCCCHHHHHHHHHHcccccC
Q 003952 677 EDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTK 716 (784)
Q Consensus 677 ~da~~~I~~L~~agi~v~MITGDn~~TA~~VA~~~gI~~~ 716 (784)
+++.+.|+.++++|++++++||+....+.++|+.+|+...
T Consensus 92 ~~~~e~i~~~~~~~~~v~IvS~~~~~~i~~~~~~~~i~~~ 131 (192)
T PF12710_consen 92 PDAMELIRELKDNGIKVVIVSGSPDEIIEPIAERLGIDDD 131 (192)
T ss_dssp TTHHHHHHHHHHTTSEEEEEEEEEHHHHHHHHHHTTSSEG
T ss_pred hhHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCce
Confidence 7888999999999999999999999999999999999753
No 44
>TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like. Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences.
Probab=93.61 E-value=0.17 Score=49.65 Aligned_cols=42 Identities=21% Similarity=0.289 Sum_probs=39.2
Q ss_pred CCCcchHHHHHHHhhCCCcEEEEcCCCHHHHHHHHHHccccc
Q 003952 674 PIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVT 715 (784)
Q Consensus 674 ~lr~da~~~I~~L~~agi~v~MITGDn~~TA~~VA~~~gI~~ 715 (784)
+++|++.+.++.|++.|++++++||.+...+..+++..|+..
T Consensus 73 ~~~~g~~~~l~~l~~~g~~~~ivS~~~~~~i~~~~~~~g~~~ 114 (177)
T TIGR01488 73 ALRPGARELISWLKERGIDTVIVSGGFDFFVEPVAEKLGIDD 114 (177)
T ss_pred CcCcCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCch
Confidence 368999999999999999999999999999999999999863
No 45
>PLN02954 phosphoserine phosphatase
Probab=93.08 E-value=0.24 Score=50.76 Aligned_cols=41 Identities=15% Similarity=0.251 Sum_probs=39.2
Q ss_pred CCCcchHHHHHHHhhCCCcEEEEcCCCHHHHHHHHHHcccc
Q 003952 674 PIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIV 714 (784)
Q Consensus 674 ~lr~da~~~I~~L~~agi~v~MITGDn~~TA~~VA~~~gI~ 714 (784)
+++|+++++++.|++.|+++.++||-....+..+++.+|+.
T Consensus 84 ~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~~l~~~gi~ 124 (224)
T PLN02954 84 RLSPGIPELVKKLRARGTDVYLVSGGFRQMIAPVAAILGIP 124 (224)
T ss_pred CCCccHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHhCCC
Confidence 47899999999999999999999999999999999999996
No 46
>TIGR00338 serB phosphoserine phosphatase SerB. Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins.
Probab=93.03 E-value=0.27 Score=50.18 Aligned_cols=42 Identities=24% Similarity=0.384 Sum_probs=40.0
Q ss_pred CCCcchHHHHHHHhhCCCcEEEEcCCCHHHHHHHHHHccccc
Q 003952 674 PIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVT 715 (784)
Q Consensus 674 ~lr~da~~~I~~L~~agi~v~MITGDn~~TA~~VA~~~gI~~ 715 (784)
+++|++++.++.|++.|+++.++||.+...+..+.+.+|+..
T Consensus 85 ~~~~g~~~~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~~i~~ 126 (219)
T TIGR00338 85 PLTEGAEELVKTLKEKGYKVAVISGGFDLFAEHVKDKLGLDA 126 (219)
T ss_pred CcCCCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCc
Confidence 689999999999999999999999999999999999999964
No 47
>TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein. This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338).
Probab=92.97 E-value=0.24 Score=50.25 Aligned_cols=41 Identities=10% Similarity=0.047 Sum_probs=38.2
Q ss_pred CCCcchHHHHHHHhhCCCcEEEEcCCCHHHHHHHHHHccccc
Q 003952 674 PIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVT 715 (784)
Q Consensus 674 ~lr~da~~~I~~L~~agi~v~MITGDn~~TA~~VA~~~gI~~ 715 (784)
+++|++++.|+.||+.+ ++.++||-....+..+++++||..
T Consensus 68 ~l~pga~ell~~lk~~~-~~~IVS~~~~~~~~~il~~lgi~~ 108 (203)
T TIGR02137 68 KPLEGAVEFVDWLRERF-QVVILSDTFYEFSQPLMRQLGFPT 108 (203)
T ss_pred CCCccHHHHHHHHHhCC-eEEEEeCChHHHHHHHHHHcCCch
Confidence 67999999999999975 999999999999999999999963
No 48
>TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact.
Probab=92.21 E-value=0.5 Score=46.65 Aligned_cols=96 Identities=14% Similarity=0.108 Sum_probs=61.3
Q ss_pred CCCCcchHHHHHHHhhCCCcEEEEcCCCHHHHHHHHHHcccccCCcEEEecC----CCCCeeEEeCCC---ccc-ccccc
Q 003952 673 CPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLILCPV----KNGKVYEWVSPD---ETE-KIQYS 744 (784)
Q Consensus 673 d~lr~da~~~I~~L~~agi~v~MITGDn~~TA~~VA~~~gI~~~~~~il~~~----~~~~~~~~~~~~---~~~-~~~~~ 744 (784)
.++++++.+.++.|++.|+++.++|+.+..++..+.+..|+.+....+.... .++.-..|.... +.. .-..|
T Consensus 71 ~~l~~g~~~ll~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~K 150 (188)
T TIGR01489 71 APIDPGFKEFIAFIKEHGIDFIVISDGNDFFIDPVLEGIGEKDVFIEIYSNPASFDNDGRHIVWPHHCHGCCSCPCGCCK 150 (188)
T ss_pred CCCCccHHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHHcCChhheeEEeccCceECCCCcEEEecCCCCccCcCCCCCCH
Confidence 5889999999999999999999999999999999999999865433344211 111111111110 000 00113
Q ss_pred hhhhhccCC--CeeEEEechhHHHHh
Q 003952 745 EKEVEGLTD--AHDLCIGGDCFEMLQ 768 (784)
Q Consensus 745 ~~~~~~l~~--~~~l~~tGd~l~~l~ 768 (784)
...++.+.. ...+++.||+.+.+.
T Consensus 151 ~~~~~~~~~~~~~~~i~iGD~~~D~~ 176 (188)
T TIGR01489 151 GKVIHKLSEPKYQHIIYIGDGVTDVC 176 (188)
T ss_pred HHHHHHHHhhcCceEEEECCCcchhc
Confidence 333443333 456899999998874
No 49
>TIGR01544 HAD-SF-IE haloacid dehalogenase superfamily, subfamily IE hydrolase, TIGR01544. This group of sequences was found during searches for members of the haloacid dehalogenase (HAD) superfamily. All of the conserved catalytic motifs are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches (IA, TIGR01493, TIGR01509, TIGR01549; IB, TIGR01488; IC, TIGR01494; ID, TIGR01658; IF TIGR01545) of that subfamily as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.
Probab=89.70 E-value=1 Score=47.87 Aligned_cols=48 Identities=10% Similarity=0.119 Sum_probs=42.8
Q ss_pred CCCCcchHHHHHHHhhCCCcEEEEcCCCHHHHHHHHHHcccccCCcEE
Q 003952 673 CPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLI 720 (784)
Q Consensus 673 d~lr~da~~~I~~L~~agi~v~MITGDn~~TA~~VA~~~gI~~~~~~i 720 (784)
-++||++.+.++.|++.|+++.++||=....+..+.++.|+......+
T Consensus 120 l~l~pG~~efl~~L~~~GIpv~IvS~G~~~~Ie~vL~~lgl~~~~~~I 167 (277)
T TIGR01544 120 VMLKDGYENFFDKLQQHSIPVFIFSAGIGNVLEEVLRQAGVYHPNVKV 167 (277)
T ss_pred CccCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHHcCCCCcCceE
Confidence 477999999999999999999999999999999999999987544444
No 50
>PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed
Probab=89.45 E-value=1.8 Score=44.25 Aligned_cols=41 Identities=15% Similarity=0.207 Sum_probs=37.9
Q ss_pred CCCcchHHHHHHHhhCCCcEEEEcCCCHHHHHHHHHHccccc
Q 003952 674 PIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVT 715 (784)
Q Consensus 674 ~lr~da~~~I~~L~~agi~v~MITGDn~~TA~~VA~~~gI~~ 715 (784)
+++|++.+.++.|++.|+++.++||=+...+..+.+.. +..
T Consensus 74 ~l~pG~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~-~~~ 114 (219)
T PRK09552 74 EIREGFHEFVQFVKENNIPFYVVSGGMDFFVYPLLQGL-IPK 114 (219)
T ss_pred CcCcCHHHHHHHHHHcCCeEEEECCCcHHHHHHHHHHh-CCc
Confidence 68999999999999999999999999999999999998 643
No 51
>PRK11009 aphA acid phosphatase/phosphotransferase; Provisional
Probab=89.38 E-value=0.85 Score=47.41 Aligned_cols=81 Identities=14% Similarity=0.093 Sum_probs=55.0
Q ss_pred CCCCcchHHHHHHHhhCCCcEEEEcC----CCHHHHHHHHHHccc--ccCCcEEEecCCCCCeeEEeCCCcccccccchh
Q 003952 673 CPIREDSAKILSELKNSSQDLAMITG----DQALTACYVASQVHI--VTKPVLILCPVKNGKVYEWVSPDETEKIQYSEK 746 (784)
Q Consensus 673 d~lr~da~~~I~~L~~agi~v~MITG----Dn~~TA~~VA~~~gI--~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~ 746 (784)
..+.+++++.+++|++.|+++.+||| -...|+..+.+..|| .+....++..+.. . + +-+..
T Consensus 113 a~p~~Ga~elL~~L~~~G~~I~iVTnR~~~k~~~t~~~Llk~~gip~~~~f~vil~gd~~-----~-------K-~~K~~ 179 (237)
T PRK11009 113 SIPKEVARQLIDMHVKRGDSIYFITGRTATKTETVSKTLADDFHIPADNMNPVIFAGDKP-----G-------Q-YTKTQ 179 (237)
T ss_pred CcchHHHHHHHHHHHHCCCeEEEEeCCCCcccHHHHHHHHHHcCCCcccceeEEEcCCCC-----C-------C-CCHHH
Confidence 45788899999999999999999999 457799999999999 4433444432210 0 0 00111
Q ss_pred hhhccCCCeeEEEechhHHHHhc
Q 003952 747 EVEGLTDAHDLCIGGDCFEMLQQ 769 (784)
Q Consensus 747 ~~~~l~~~~~l~~tGd~l~~l~~ 769 (784)
.++ +....++.||..+.+..
T Consensus 180 ~l~---~~~i~I~IGDs~~Di~a 199 (237)
T PRK11009 180 WLK---KKNIRIFYGDSDNDITA 199 (237)
T ss_pred HHH---hcCCeEEEcCCHHHHHH
Confidence 222 22237799999998864
No 52
>PRK13222 phosphoglycolate phosphatase; Provisional
Probab=89.23 E-value=1 Score=45.98 Aligned_cols=49 Identities=14% Similarity=0.165 Sum_probs=42.9
Q ss_pred CCCCcchHHHHHHHhhCCCcEEEEcCCCHHHHHHHHHHcccccCCcEEE
Q 003952 673 CPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLIL 721 (784)
Q Consensus 673 d~lr~da~~~I~~L~~agi~v~MITGDn~~TA~~VA~~~gI~~~~~~il 721 (784)
.++.|++.+.++.|++.|+++.++||.....+..+.+..|+......+.
T Consensus 92 ~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~~~~ 140 (226)
T PRK13222 92 SRLYPGVKETLAALKAAGYPLAVVTNKPTPFVAPLLEALGIADYFSVVI 140 (226)
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCccCccEEE
Confidence 4688999999999999999999999999999999999999875444444
No 53
>cd01427 HAD_like Haloacid dehalogenase-like hydrolases. The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.
Probab=89.07 E-value=0.67 Score=42.39 Aligned_cols=46 Identities=15% Similarity=0.150 Sum_probs=41.9
Q ss_pred eecCCCCcchHHHHHHHhhCCCcEEEEcCCCHHHHHHHHHHccccc
Q 003952 670 VFNCPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVT 715 (784)
Q Consensus 670 ~~~d~lr~da~~~I~~L~~agi~v~MITGDn~~TA~~VA~~~gI~~ 715 (784)
.-..++.+++.+.++.|++.|++++++||-+...+.++.+++|+..
T Consensus 20 ~~~~~~~~~~~~~l~~l~~~g~~i~ivS~~~~~~~~~~~~~~~~~~ 65 (139)
T cd01427 20 IEELELYPGVKEALKELKEKGIKLALATNKSRREVLELLEELGLDD 65 (139)
T ss_pred cccCCcCcCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHHHcCCch
Confidence 4456889999999999999999999999999999999999999853
No 54
>TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase. Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX.
Probab=88.70 E-value=1.8 Score=44.16 Aligned_cols=41 Identities=12% Similarity=0.157 Sum_probs=37.7
Q ss_pred CCCCcchHHHHHHHhhCCCcEEEEcCCCHHHHHHHHHHccc
Q 003952 673 CPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHI 713 (784)
Q Consensus 673 d~lr~da~~~I~~L~~agi~v~MITGDn~~TA~~VA~~~gI 713 (784)
.+++|++.+.++.|++.|+++.++||.....+..+.+..+.
T Consensus 69 ~~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~~~ 109 (214)
T TIGR03333 69 AEIREGFREFVAFINEHGIPFYVISGGMDFFVYPLLEGIVE 109 (214)
T ss_pred CcccccHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHhhCC
Confidence 47899999999999999999999999999999999988754
No 55
>TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672. Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion.
Probab=88.03 E-value=1.3 Score=46.01 Aligned_cols=81 Identities=16% Similarity=0.196 Sum_probs=54.0
Q ss_pred CCcchHHHHHHHhhCCCcEEEEcCC----CHHHHHHHHHHcccccCCcEEEecCCCCCeeEEeCCCcccccccchhhhhc
Q 003952 675 IREDSAKILSELKNSSQDLAMITGD----QALTACYVASQVHIVTKPVLILCPVKNGKVYEWVSPDETEKIQYSEKEVEG 750 (784)
Q Consensus 675 lr~da~~~I~~L~~agi~v~MITGD----n~~TA~~VA~~~gI~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 750 (784)
+++.+++.+++|++.|+++.++|+= ...++..+.+..||......++..+.... .++.....
T Consensus 115 p~~~a~elL~~l~~~G~~i~iVTnr~~~k~~~~a~~ll~~lGi~~~f~~i~~~d~~~~--------------~Kp~~~~~ 180 (237)
T TIGR01672 115 PKEVARQLIDMHQRRGDAIFFVTGRTPGKTDTVSKTLAKNFHIPAMNPVIFAGDKPGQ--------------YQYTKTQW 180 (237)
T ss_pred chhHHHHHHHHHHHCCCEEEEEeCCCCCcCHHHHHHHHHHhCCchheeEEECCCCCCC--------------CCCCHHHH
Confidence 3445999999999999999999996 67799999999999755455553221100 01101111
Q ss_pred cCCCeeEEEechhHHHHhc
Q 003952 751 LTDAHDLCIGGDCFEMLQQ 769 (784)
Q Consensus 751 l~~~~~l~~tGd~l~~l~~ 769 (784)
+.+....+|.||..+.+..
T Consensus 181 l~~~~i~i~vGDs~~DI~a 199 (237)
T TIGR01672 181 IQDKNIRIHYGDSDNDITA 199 (237)
T ss_pred HHhCCCeEEEeCCHHHHHH
Confidence 2222226799999999853
No 56
>PRK10826 2-deoxyglucose-6-phosphatase; Provisional
Probab=88.00 E-value=1.3 Score=45.36 Aligned_cols=49 Identities=8% Similarity=0.007 Sum_probs=43.6
Q ss_pred CCCCcchHHHHHHHhhCCCcEEEEcCCCHHHHHHHHHHcccccCCcEEE
Q 003952 673 CPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLIL 721 (784)
Q Consensus 673 d~lr~da~~~I~~L~~agi~v~MITGDn~~TA~~VA~~~gI~~~~~~il 721 (784)
.++.|++.++++.|++.|+++.++||........+.++.||......+.
T Consensus 91 ~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~~~~ 139 (222)
T PRK10826 91 RPLLPGVREALALCKAQGLKIGLASASPLHMLEAVLTMFDLRDYFDALA 139 (222)
T ss_pred CCCCCCHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHhCcchhcccEEE
Confidence 5788999999999999999999999999999999999999876554454
No 57
>PRK11133 serB phosphoserine phosphatase; Provisional
Probab=87.84 E-value=1 Score=49.13 Aligned_cols=43 Identities=14% Similarity=0.269 Sum_probs=39.4
Q ss_pred CCCCcchHHHHHHHhhCCCcEEEEcCCCHHHHHHHHHHccccc
Q 003952 673 CPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVT 715 (784)
Q Consensus 673 d~lr~da~~~I~~L~~agi~v~MITGDn~~TA~~VA~~~gI~~ 715 (784)
-++.|++.+.|+.|++.|+++.++||.....+..+.+++|+..
T Consensus 180 l~l~pGa~elL~~Lk~~G~~~aIvSgg~~~~~~~l~~~Lgld~ 222 (322)
T PRK11133 180 LPLMPGLTELVLKLQALGWKVAIASGGFTYFADYLRDKLRLDA 222 (322)
T ss_pred CCCChhHHHHHHHHHHcCCEEEEEECCcchhHHHHHHHcCCCe
Confidence 3689999999999999999999999999888999999999853
No 58
>TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein. The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity.
Probab=87.14 E-value=1.4 Score=44.48 Aligned_cols=49 Identities=14% Similarity=0.184 Sum_probs=42.3
Q ss_pred CCCCcchHHHHHHHhhCCCcEEEEcCCCHHHHHHHHHHcccccCCcEEE
Q 003952 673 CPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLIL 721 (784)
Q Consensus 673 d~lr~da~~~I~~L~~agi~v~MITGDn~~TA~~VA~~~gI~~~~~~il 721 (784)
.++.|++.++++.|++.|+++.++||.+...+..+-+..|+......+.
T Consensus 74 ~~~~~g~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~~l~~~f~~i~ 122 (205)
T TIGR01454 74 VEVFPGVPELLAELRADGVGTAIATGKSGPRARSLLEALGLLPLFDHVI 122 (205)
T ss_pred cccCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHcCChhheeeEE
Confidence 3788999999999999999999999999999999999999975433443
No 59
>PRK13288 pyrophosphatase PpaX; Provisional
Probab=86.80 E-value=1.3 Score=44.91 Aligned_cols=49 Identities=14% Similarity=0.026 Sum_probs=42.8
Q ss_pred CCCcchHHHHHHHhhCCCcEEEEcCCCHHHHHHHHHHcccccCCcEEEe
Q 003952 674 PIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLILC 722 (784)
Q Consensus 674 ~lr~da~~~I~~L~~agi~v~MITGDn~~TA~~VA~~~gI~~~~~~il~ 722 (784)
++.|++.+.++.|++.|+++.++||-....+..+-+..|+......++.
T Consensus 82 ~~~~g~~~~l~~L~~~g~~~~i~S~~~~~~~~~~l~~~gl~~~f~~i~~ 130 (214)
T PRK13288 82 TEYETVYETLKTLKKQGYKLGIVTTKMRDTVEMGLKLTGLDEFFDVVIT 130 (214)
T ss_pred ccCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCChhceeEEEe
Confidence 4789999999999999999999999999999999999999765444543
No 60
>TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702).
Probab=86.62 E-value=1.7 Score=43.94 Aligned_cols=48 Identities=10% Similarity=0.128 Sum_probs=42.4
Q ss_pred CCCcchHHHHHHHhhCCCcEEEEcCCCHHHHHHHHHHcccccCCcEEE
Q 003952 674 PIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLIL 721 (784)
Q Consensus 674 ~lr~da~~~I~~L~~agi~v~MITGDn~~TA~~VA~~~gI~~~~~~il 721 (784)
++.|++.++++.|++.|+++.++|+-+...+..+.+..|+......+.
T Consensus 85 ~~~~g~~~~L~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~~~~ 132 (213)
T TIGR01449 85 SVFPGVEATLGALRAKGLRLGLVTNKPTPLARPLLELLGLAKYFSVLI 132 (213)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCcHhhCcEEE
Confidence 679999999999999999999999999999999999999975444444
No 61
>PRK13582 thrH phosphoserine phosphatase; Provisional
Probab=85.96 E-value=1.9 Score=43.38 Aligned_cols=41 Identities=12% Similarity=0.024 Sum_probs=38.2
Q ss_pred CCCcchHHHHHHHhhCCCcEEEEcCCCHHHHHHHHHHccccc
Q 003952 674 PIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVT 715 (784)
Q Consensus 674 ~lr~da~~~I~~L~~agi~v~MITGDn~~TA~~VA~~~gI~~ 715 (784)
++.|++.+.++.|+++ +++.++||-....+..+.+++||..
T Consensus 68 ~~~pg~~e~L~~L~~~-~~~~IvS~~~~~~~~~~l~~~gl~~ 108 (205)
T PRK13582 68 DPLPGAVEFLDWLRER-FQVVILSDTFYEFAGPLMRQLGWPT 108 (205)
T ss_pred CCCCCHHHHHHHHHhc-CCEEEEeCCcHHHHHHHHHHcCCch
Confidence 5689999999999999 9999999999999999999999863
No 62
>COG0546 Gph Predicted phosphatases [General function prediction only]
Probab=85.85 E-value=2.7 Score=43.13 Aligned_cols=89 Identities=12% Similarity=0.072 Sum_probs=61.7
Q ss_pred cCCCCcchHHHHHHHhhCCCcEEEEcCCCHHHHHHHHHHcccccCCcEEEecCCCCCeeEEeCCCcccccccch-hhhhc
Q 003952 672 NCPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLILCPVKNGKVYEWVSPDETEKIQYSE-KEVEG 750 (784)
Q Consensus 672 ~d~lr~da~~~I~~L~~agi~v~MITGDn~~TA~~VA~~~gI~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 750 (784)
...+=|+++++++.|+++|++..++|+++...+..+.+..|+......+...+. .....+ .|... ....+
T Consensus 87 ~~~~~~gv~e~L~~L~~~g~~l~i~T~k~~~~~~~~l~~~gl~~~F~~i~g~~~----~~~~KP-----~P~~l~~~~~~ 157 (220)
T COG0546 87 ESRLFPGVKELLAALKSAGYKLGIVTNKPERELDILLKALGLADYFDVIVGGDD----VPPPKP-----DPEPLLLLLEK 157 (220)
T ss_pred cCccCCCHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHhCCccccceEEcCCC----CCCCCc-----CHHHHHHHHHH
Confidence 557789999999999999999999999999999999999999877666664110 000000 00000 11122
Q ss_pred cCC-CeeEEEechhHHHHhc
Q 003952 751 LTD-AHDLCIGGDCFEMLQQ 769 (784)
Q Consensus 751 l~~-~~~l~~tGd~l~~l~~ 769 (784)
+.. ..++.|+||..+.+..
T Consensus 158 ~~~~~~~~l~VGDs~~Di~a 177 (220)
T COG0546 158 LGLDPEEALMVGDSLNDILA 177 (220)
T ss_pred hCCChhheEEECCCHHHHHH
Confidence 222 2469999999998853
No 63
>PRK08238 hypothetical protein; Validated
Probab=85.12 E-value=2.2 Score=49.13 Aligned_cols=40 Identities=20% Similarity=0.286 Sum_probs=38.6
Q ss_pred CCCcchHHHHHHHhhCCCcEEEEcCCCHHHHHHHHHHccc
Q 003952 674 PIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHI 713 (784)
Q Consensus 674 ~lr~da~~~I~~L~~agi~v~MITGDn~~TA~~VA~~~gI 713 (784)
|++|++.+.|+++++.|++++++|+=+...+..+++..|+
T Consensus 72 p~~pga~e~L~~lk~~G~~v~LaTas~~~~a~~i~~~lGl 111 (479)
T PRK08238 72 PYNEEVLDYLRAERAAGRKLVLATASDERLAQAVAAHLGL 111 (479)
T ss_pred CCChhHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCC
Confidence 5789999999999999999999999999999999999998
No 64
>PRK13223 phosphoglycolate phosphatase; Provisional
Probab=84.40 E-value=2.3 Score=45.23 Aligned_cols=49 Identities=18% Similarity=0.135 Sum_probs=42.1
Q ss_pred CCCCcchHHHHHHHhhCCCcEEEEcCCCHHHHHHHHHHcccccCCcEEE
Q 003952 673 CPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLIL 721 (784)
Q Consensus 673 d~lr~da~~~I~~L~~agi~v~MITGDn~~TA~~VA~~~gI~~~~~~il 721 (784)
.++.|++.++++.|++.|+++.++||-+...+..+.++.|+......+.
T Consensus 100 ~~~~~g~~e~L~~Lk~~g~~l~ivTn~~~~~~~~~l~~~~i~~~f~~i~ 148 (272)
T PRK13223 100 TVVYPGVRDTLKWLKKQGVEMALITNKPERFVAPLLDQMKIGRYFRWII 148 (272)
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEECCcHHHHHHHHHHcCcHhhCeEEE
Confidence 4789999999999999999999999999999999999999865433344
No 65
>TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548. All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's.
Probab=83.65 E-value=2.9 Score=41.85 Aligned_cols=50 Identities=14% Similarity=0.119 Sum_probs=42.6
Q ss_pred cCCCCcchHHHHHHHhhCCCcEEEEcCCCHHHHHHHHHHcccccCCcEEE
Q 003952 672 NCPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLIL 721 (784)
Q Consensus 672 ~d~lr~da~~~I~~L~~agi~v~MITGDn~~TA~~VA~~~gI~~~~~~il 721 (784)
.+++.+.++++++.|++.|+++.++||-....+..+-+..|+......+.
T Consensus 104 ~~~~~~~~~~~L~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~f~~~~ 153 (197)
T TIGR01548 104 EDETLLTPKGLLRELHRAPKGMAVVTGRPRKDAAKFLTTHGLEILFPVQI 153 (197)
T ss_pred ccccccCHHHHHHHHHHcCCcEEEECCCCHHHHHHHHHHcCchhhCCEEE
Confidence 34567778999999999999999999999999999999999975544444
No 66
>TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490. A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog.
Probab=83.53 E-value=1.2 Score=44.69 Aligned_cols=43 Identities=7% Similarity=0.127 Sum_probs=40.4
Q ss_pred cCCCCcchHHHHHHHhhCCCcEEEEcCCCHHHHHHHHHHcccc
Q 003952 672 NCPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIV 714 (784)
Q Consensus 672 ~d~lr~da~~~I~~L~~agi~v~MITGDn~~TA~~VA~~~gI~ 714 (784)
..+++|++.+.|+.+++.|++++++||-....+..+++.+|+.
T Consensus 85 ~~~~~~~~~~~l~~l~~~g~~v~ivS~s~~~~v~~~~~~lg~~ 127 (202)
T TIGR01490 85 ESILYPEARDLIRWHKAEGHTIVLVSASLTILVKPLARILGID 127 (202)
T ss_pred HHhccHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHcCCc
Confidence 5578999999999999999999999999999999999999985
No 67
>TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II. Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related.
Probab=82.24 E-value=2.9 Score=41.83 Aligned_cols=48 Identities=17% Similarity=0.149 Sum_probs=41.2
Q ss_pred CCCcchHHHHHHHhhCCCcEEEEcCCCHHHHHHHHHHcccccCCcEEE
Q 003952 674 PIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLIL 721 (784)
Q Consensus 674 ~lr~da~~~I~~L~~agi~v~MITGDn~~TA~~VA~~~gI~~~~~~il 721 (784)
++.|++.++++.|++.|+++.++|+-+...+..+.+..|+.+....++
T Consensus 92 ~~~~~~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~gl~~~fd~i~ 139 (198)
T TIGR01428 92 PPHPDVPAGLRALKERGYRLAILSNGSPAMLKSLVKHAGLDDPFDAVL 139 (198)
T ss_pred CCCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHCCChhhhheeE
Confidence 678999999999999999999999988888889999999864444444
No 68
>TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal. This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog.
Probab=82.14 E-value=2.1 Score=42.73 Aligned_cols=41 Identities=20% Similarity=0.243 Sum_probs=39.1
Q ss_pred CCCcchHHHHHHHhhCCCcEEEEcCCCHHHHHHHHHHcccc
Q 003952 674 PIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIV 714 (784)
Q Consensus 674 ~lr~da~~~I~~L~~agi~v~MITGDn~~TA~~VA~~~gI~ 714 (784)
+++|++.+.++.|++.|+++.++||-....+..+++..|+.
T Consensus 80 ~~~~g~~e~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~g~~ 120 (201)
T TIGR01491 80 SLRDYAEELVRWLKEKGLKTAIVSGGIMCLAKKVAEKLNPD 120 (201)
T ss_pred CCCccHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHhCCC
Confidence 68999999999999999999999999999999999999975
No 69
>TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family. which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles.
Probab=81.53 E-value=4.5 Score=42.80 Aligned_cols=82 Identities=7% Similarity=0.053 Sum_probs=55.1
Q ss_pred cCCCCcchHHHHHHHhhCCCcEEEEcCCC---HHHHHHHHHHccccc--CCcEEEecCCCCCeeEEeCCCcccccccchh
Q 003952 672 NCPIREDSAKILSELKNSSQDLAMITGDQ---ALTACYVASQVHIVT--KPVLILCPVKNGKVYEWVSPDETEKIQYSEK 746 (784)
Q Consensus 672 ~d~lr~da~~~I~~L~~agi~v~MITGDn---~~TA~~VA~~~gI~~--~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~ 746 (784)
..++-|++.+.++.|++.|+++.++|+=. .......-+..|+.. ...+++.++ . +.+..
T Consensus 116 ~a~~ipGA~e~L~~L~~~G~~v~iVTnR~~~~~~~T~~~Lkk~Gi~~~~~d~lllr~~------------~----~~K~~ 179 (266)
T TIGR01533 116 QAKPVAGALDFLNYANSKGVKIFYVSNRSEKEKAATLKNLKRFGFPQADEEHLLLKKD------------K----SSKES 179 (266)
T ss_pred CCCcCccHHHHHHHHHHCCCeEEEEeCCCcchHHHHHHHHHHcCcCCCCcceEEeCCC------------C----CCcHH
Confidence 45678999999999999999999999955 333445556688853 234444221 0 11333
Q ss_pred hhhccCCCee-EEEechhHHHHhc
Q 003952 747 EVEGLTDAHD-LCIGGDCFEMLQQ 769 (784)
Q Consensus 747 ~~~~l~~~~~-l~~tGd~l~~l~~ 769 (784)
....+.++|+ +++.||-++.+..
T Consensus 180 rr~~I~~~y~Ivl~vGD~~~Df~~ 203 (266)
T TIGR01533 180 RRQKVQKDYEIVLLFGDNLLDFDD 203 (266)
T ss_pred HHHHHHhcCCEEEEECCCHHHhhh
Confidence 3344545677 7799999999854
No 70
>TIGR03351 PhnX-like phosphonatase-like hydrolase. This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the
Probab=81.16 E-value=5.7 Score=40.37 Aligned_cols=50 Identities=16% Similarity=0.157 Sum_probs=43.6
Q ss_pred CCCCcchHHHHHHHhhCCCcEEEEcCCCHHHHHHHHHHcccc--cCCcEEEe
Q 003952 673 CPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIV--TKPVLILC 722 (784)
Q Consensus 673 d~lr~da~~~I~~L~~agi~v~MITGDn~~TA~~VA~~~gI~--~~~~~il~ 722 (784)
.++.||+.+.++.|++.|+++.++||-....+..+-+..|+. +....+..
T Consensus 86 ~~l~~G~~~~L~~L~~~g~~~~ivT~~~~~~~~~~l~~~~l~~~~~f~~i~~ 137 (220)
T TIGR03351 86 PVALPGAEEAFRSLRSSGIKVALTTGFDRDTAERLLEKLGWTVGDDVDAVVC 137 (220)
T ss_pred CccCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHhhhhhhccCCEEEc
Confidence 478999999999999999999999999999999999999987 54445543
No 71
>PRK13226 phosphoglycolate phosphatase; Provisional
Probab=79.78 E-value=4.2 Score=41.93 Aligned_cols=48 Identities=10% Similarity=0.162 Sum_probs=41.0
Q ss_pred CCCcchHHHHHHHhhCCCcEEEEcCCCHHHHHHHHHHcccccCCcEEE
Q 003952 674 PIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLIL 721 (784)
Q Consensus 674 ~lr~da~~~I~~L~~agi~v~MITGDn~~TA~~VA~~~gI~~~~~~il 721 (784)
++.|++.+.++.|++.|+++.++|+.+...+..+-+..|+......+.
T Consensus 95 ~~~pg~~~~L~~L~~~g~~l~i~Tn~~~~~~~~~l~~~~l~~~f~~i~ 142 (229)
T PRK13226 95 QLFDGVEGMLQRLECAGCVWGIVTNKPEYLARLILPQLGWEQRCAVLI 142 (229)
T ss_pred eeCCCHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCchhcccEEE
Confidence 678999999999999999999999999988888888899865433333
No 72
>TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent.
Probab=79.72 E-value=6.3 Score=41.18 Aligned_cols=43 Identities=12% Similarity=0.063 Sum_probs=39.6
Q ss_pred CCCcchHHHHHHHhhCCCcEEEEcCCCHHHHHHHHHHcccccC
Q 003952 674 PIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTK 716 (784)
Q Consensus 674 ~lr~da~~~I~~L~~agi~v~MITGDn~~TA~~VA~~~gI~~~ 716 (784)
++.|++.++++.|++.|+++.++||.....+..+-++.|+...
T Consensus 99 ~~~pg~~e~L~~L~~~g~~l~IvT~~~~~~~~~~l~~~gl~~~ 141 (253)
T TIGR01422 99 SPIPGVIEVIAYLRARGIKIGSTTGYTREMMDVVAPEAALQGY 141 (253)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHHHHhcCC
Confidence 5689999999999999999999999999999999999998754
No 73
>TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549).
Probab=79.02 E-value=5.8 Score=40.31 Aligned_cols=48 Identities=15% Similarity=0.128 Sum_probs=41.0
Q ss_pred CCCcchHHHHHHHhhCCCcEEEEcCCCHHHHHHHHHHcccccCCcEEE
Q 003952 674 PIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLIL 721 (784)
Q Consensus 674 ~lr~da~~~I~~L~~agi~v~MITGDn~~TA~~VA~~~gI~~~~~~il 721 (784)
++.|++.++++.|++.|+++.++|+=+...+...-+..|+......+.
T Consensus 94 ~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~~~~l~~~f~~i~ 141 (221)
T TIGR02253 94 RVYPGVRDTLMELRESGYRLGIITDGLPVKQWEKLERLGVRDFFDAVI 141 (221)
T ss_pred CCCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHhCChHHhccEEE
Confidence 679999999999999999999999988888888889999875443444
No 74
>PRK13225 phosphoglycolate phosphatase; Provisional
Probab=77.93 E-value=5.2 Score=42.57 Aligned_cols=48 Identities=10% Similarity=0.128 Sum_probs=42.3
Q ss_pred CCCcchHHHHHHHhhCCCcEEEEcCCCHHHHHHHHHHcccccCCcEEE
Q 003952 674 PIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLIL 721 (784)
Q Consensus 674 ~lr~da~~~I~~L~~agi~v~MITGDn~~TA~~VA~~~gI~~~~~~il 721 (784)
++-|++.++++.|++.|+++.++|+.+...+..+-+..|+.+....+.
T Consensus 142 ~l~pg~~e~L~~L~~~gi~laIvSn~~~~~~~~~L~~~gl~~~F~~vi 189 (273)
T PRK13225 142 QLFPGVADLLAQLRSRSLCLGILSSNSRQNIEAFLQRQGLRSLFSVVQ 189 (273)
T ss_pred CcCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCChhheEEEE
Confidence 678999999999999999999999999999999999999975444443
No 75
>TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase. Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles.
Probab=77.91 E-value=2.9 Score=43.12 Aligned_cols=43 Identities=12% Similarity=0.130 Sum_probs=38.5
Q ss_pred cCCCCcchHHHHHHHhhCCCcEEEEcCCCHHHHHHHHHHcccc
Q 003952 672 NCPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIV 714 (784)
Q Consensus 672 ~d~lr~da~~~I~~L~~agi~v~MITGDn~~TA~~VA~~~gI~ 714 (784)
.+..-++++++|++|++.|+++++.||=.+..+...++++|+.
T Consensus 13 ~~~~~~~~~~ai~~l~~~G~~~vi~TgR~~~~~~~~~~~lg~~ 55 (225)
T TIGR02461 13 PGYEPGPAREALEELKDLGFPIVFVSSKTRAEQEYYREELGVE 55 (225)
T ss_pred CCCCchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCC
Confidence 3455567999999999999999999999999999999999974
No 76
>TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family. The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved.
Probab=77.87 E-value=2.7 Score=40.49 Aligned_cols=33 Identities=21% Similarity=0.136 Sum_probs=31.8
Q ss_pred HHHHHhhCCCcEEEEcCCCHHHHHHHHHHcccc
Q 003952 682 ILSELKNSSQDLAMITGDQALTACYVASQVHIV 714 (784)
Q Consensus 682 ~I~~L~~agi~v~MITGDn~~TA~~VA~~~gI~ 714 (784)
+|++|++.|+++.++||++...+..+.++.|+.
T Consensus 36 ~i~~Lk~~G~~i~IvTn~~~~~~~~~l~~~gi~ 68 (154)
T TIGR01670 36 GIRCALKSGIEVAIITGRKAKLVEDRCKTLGIT 68 (154)
T ss_pred HHHHHHHCCCEEEEEECCCCHHHHHHHHHcCCC
Confidence 999999999999999999999999999999985
No 77
>PRK01158 phosphoglycolate phosphatase; Provisional
Probab=77.68 E-value=2.8 Score=43.02 Aligned_cols=41 Identities=10% Similarity=0.070 Sum_probs=38.2
Q ss_pred CCCcchHHHHHHHhhCCCcEEEEcCCCHHHHHHHHHHcccc
Q 003952 674 PIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIV 714 (784)
Q Consensus 674 ~lr~da~~~I~~L~~agi~v~MITGDn~~TA~~VA~~~gI~ 714 (784)
.+-+.+.++|++|++.||++++.||-....+..+++++|+.
T Consensus 20 ~i~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~ 60 (230)
T PRK01158 20 RLSLKAVEAIRKAEKLGIPVILATGNVLCFARAAAKLIGTS 60 (230)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCCC
Confidence 37789999999999999999999999999999999999974
No 78
>TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED. HAD subfamilies caused by an overly broad single model.
Probab=77.21 E-value=8.8 Score=37.38 Aligned_cols=47 Identities=11% Similarity=0.157 Sum_probs=37.9
Q ss_pred CCCcchHHHHHHHhhCCCcEEEEcCCCHHHHHHHHHHcccccCCcEEE
Q 003952 674 PIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLIL 721 (784)
Q Consensus 674 ~lr~da~~~I~~L~~agi~v~MITGDn~~TA~~VA~~~gI~~~~~~il 721 (784)
++.|++.+.++.|++.|+++.++|+-.... ..+..++|+......++
T Consensus 85 ~~~~g~~~~l~~l~~~g~~~~i~Tn~~~~~-~~~~~~~~l~~~f~~i~ 131 (183)
T TIGR01509 85 KPLPGVEPLLEALRARGKKLALLTNSPRDH-AVLVQELGLRDLFDVVI 131 (183)
T ss_pred ccCcCHHHHHHHHHHCCCeEEEEeCCchHH-HHHHHhcCCHHHCCEEE
Confidence 678999999999999999999999977777 55555688875444444
No 79
>PLN03243 haloacid dehalogenase-like hydrolase; Provisional
Probab=76.70 E-value=5.7 Score=41.94 Aligned_cols=48 Identities=15% Similarity=0.101 Sum_probs=42.6
Q ss_pred CCCcchHHHHHHHhhCCCcEEEEcCCCHHHHHHHHHHcccccCCcEEE
Q 003952 674 PIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLIL 721 (784)
Q Consensus 674 ~lr~da~~~I~~L~~agi~v~MITGDn~~TA~~VA~~~gI~~~~~~il 721 (784)
++.|++.++++.|++.|+++.++|+-....+..+-+..|+.+....+.
T Consensus 109 ~l~pg~~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~~Fd~ii 156 (260)
T PLN03243 109 RLRPGSREFVQALKKHEIPIAVASTRPRRYLERAIEAVGMEGFFSVVL 156 (260)
T ss_pred ccCCCHHHHHHHHHHCCCEEEEEeCcCHHHHHHHHHHcCCHhhCcEEE
Confidence 568999999999999999999999999999999999999976544554
No 80
>TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily. The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences.
Probab=75.50 E-value=4.1 Score=42.65 Aligned_cols=41 Identities=12% Similarity=0.216 Sum_probs=38.3
Q ss_pred CCCcchHHHHHHHhhCCCcEEEEcCCCHHHHHHHHHHcccc
Q 003952 674 PIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIV 714 (784)
Q Consensus 674 ~lr~da~~~I~~L~~agi~v~MITGDn~~TA~~VA~~~gI~ 714 (784)
++-+++.++|++|++.|+++++.||.+...+..+.+++|+.
T Consensus 16 ~i~~~~~~~i~~l~~~G~~~~iaTGR~~~~~~~~~~~~~~~ 56 (256)
T TIGR00099 16 TISPSTKEALAKLREKGIKVVLATGRPYKEVKNILKELGLD 56 (256)
T ss_pred ccCHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCC
Confidence 57789999999999999999999999999999999999874
No 81
>PLN02770 haloacid dehalogenase-like hydrolase family protein
Probab=75.02 E-value=7.3 Score=40.72 Aligned_cols=48 Identities=10% Similarity=-0.015 Sum_probs=42.8
Q ss_pred CCCcchHHHHHHHhhCCCcEEEEcCCCHHHHHHHHHHcccccCCcEEE
Q 003952 674 PIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLIL 721 (784)
Q Consensus 674 ~lr~da~~~I~~L~~agi~v~MITGDn~~TA~~VA~~~gI~~~~~~il 721 (784)
++.|++.++++.|++.|+++.++|+-....+..+-+..||.+....+.
T Consensus 108 ~l~pgv~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~~Fd~iv 155 (248)
T PLN02770 108 KPLNGLYKLKKWIEDRGLKRAAVTNAPRENAELMISLLGLSDFFQAVI 155 (248)
T ss_pred CcCccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCChhhCcEEE
Confidence 578999999999999999999999999999999999999986555554
No 82
>TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal. TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases.
Probab=74.13 E-value=3.8 Score=41.70 Aligned_cols=41 Identities=15% Similarity=0.191 Sum_probs=38.7
Q ss_pred CCCcchHHHHHHHhhCCCcEEEEcCCCHHHHHHHHHHcccc
Q 003952 674 PIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIV 714 (784)
Q Consensus 674 ~lr~da~~~I~~L~~agi~v~MITGDn~~TA~~VA~~~gI~ 714 (784)
.+-+.+.++|++|++.|+++++.||=+...+..+++++++.
T Consensus 18 ~i~~~~~~~i~~l~~~g~~~~~~TGR~~~~~~~~~~~l~~~ 58 (215)
T TIGR01487 18 MISERAIEAIRKAEKKGIPVSLVTGNTVPFARALAVLIGTS 58 (215)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEcCCcchhHHHHHHHhCCC
Confidence 58899999999999999999999999999999999999875
No 83
>COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only]
Probab=73.96 E-value=4 Score=42.91 Aligned_cols=41 Identities=12% Similarity=0.236 Sum_probs=39.3
Q ss_pred CCcchHHHHHHHhhCCCcEEEEcCCCHHHHHHHHHHccccc
Q 003952 675 IREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVT 715 (784)
Q Consensus 675 lr~da~~~I~~L~~agi~v~MITGDn~~TA~~VA~~~gI~~ 715 (784)
+.+.++++|+++++.|+++++.||-....+..+.+++|+..
T Consensus 21 i~~~~~~al~~~~~~g~~v~iaTGR~~~~~~~~~~~l~~~~ 61 (264)
T COG0561 21 ISPETKEALARLREKGVKVVLATGRPLPDVLSILEELGLDG 61 (264)
T ss_pred cCHHHHHHHHHHHHCCCEEEEECCCChHHHHHHHHHcCCCc
Confidence 89999999999999999999999999999999999999864
No 84
>PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A ....
Probab=73.94 E-value=1.8 Score=38.67 Aligned_cols=48 Identities=13% Similarity=0.140 Sum_probs=35.9
Q ss_pred EEEeecCCCCcchHHHHHHHhhCCCcEEEEcCCCHHHHHHHH---HHcccc
Q 003952 667 GFAVFNCPIREDSAKILSELKNSSQDLAMITGDQALTACYVA---SQVHIV 714 (784)
Q Consensus 667 G~l~~~d~lr~da~~~I~~L~~agi~v~MITGDn~~TA~~VA---~~~gI~ 714 (784)
|.+.-.+.+=|++.++|+.|+++|++++.+|-....|...++ +++||.
T Consensus 7 Gvl~~g~~~ipga~e~l~~L~~~g~~~~~lTNns~~s~~~~~~~L~~~Gi~ 57 (101)
T PF13344_consen 7 GVLYNGNEPIPGAVEALDALRERGKPVVFLTNNSSRSREEYAKKLKKLGIP 57 (101)
T ss_dssp TTSEETTEE-TTHHHHHHHHHHTTSEEEEEES-SSS-HHHHHHHHHHTTTT
T ss_pred cEeEeCCCcCcCHHHHHHHHHHcCCCEEEEeCCCCCCHHHHHHHHHhcCcC
Confidence 334456677899999999999999999999998877766666 456765
No 85
>PHA03398 viral phosphatase superfamily protein; Provisional
Probab=73.83 E-value=7.5 Score=41.54 Aligned_cols=47 Identities=17% Similarity=0.064 Sum_probs=40.2
Q ss_pred CC-cchHHHHHHHhhCCCcEEEEcCCCHHHHHHHHHHcccccCCcEEE
Q 003952 675 IR-EDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLIL 721 (784)
Q Consensus 675 lr-~da~~~I~~L~~agi~v~MITGDn~~TA~~VA~~~gI~~~~~~il 721 (784)
+| |++.+++++|+++|+++.++|+-+...+.++.++.|+......+.
T Consensus 148 irdp~V~EtL~eLkekGikLaIvTNg~Re~v~~~Le~lgL~~yFDvII 195 (303)
T PHA03398 148 IRDPFVYDSLDELKERGCVLVLWSYGNREHVVHSLKETKLEGYFDIII 195 (303)
T ss_pred cCChhHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHcCCCccccEEE
Confidence 56 899999999999999999999777888899999999975444444
No 86
>TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB. The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene.
Probab=73.77 E-value=6.7 Score=40.00 Aligned_cols=42 Identities=21% Similarity=0.129 Sum_probs=37.6
Q ss_pred CCCcchHHHHH-HHhhCCCcEEEEcCCCHHHHHHHHHHccccc
Q 003952 674 PIREDSAKILS-ELKNSSQDLAMITGDQALTACYVASQVHIVT 715 (784)
Q Consensus 674 ~lr~da~~~I~-~L~~agi~v~MITGDn~~TA~~VA~~~gI~~ 715 (784)
.++|++.++|+ .+++.|++++++|+=....+..+|+..++..
T Consensus 94 ~l~pga~e~L~~~l~~~G~~v~IvSas~~~~~~~ia~~~~~~~ 136 (210)
T TIGR01545 94 TAFPLVAERLRQYLESSDADIWLITGSPQPLVEAVYFDSNFIH 136 (210)
T ss_pred CCCccHHHHHHHHHHhCCCEEEEEcCCcHHHHHHHHHhccccc
Confidence 56999999996 7899999999999999999999999976643
No 87
>PRK10513 sugar phosphate phosphatase; Provisional
Probab=73.74 E-value=4.5 Score=42.66 Aligned_cols=42 Identities=10% Similarity=0.165 Sum_probs=39.0
Q ss_pred CCCCcchHHHHHHHhhCCCcEEEEcCCCHHHHHHHHHHcccc
Q 003952 673 CPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIV 714 (784)
Q Consensus 673 d~lr~da~~~I~~L~~agi~v~MITGDn~~TA~~VA~~~gI~ 714 (784)
..+-+.++++|++|++.|+++++.||-....+..+.+++|+.
T Consensus 19 ~~i~~~~~~ai~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~ 60 (270)
T PRK10513 19 HTISPAVKQAIAAARAKGVNVVLTTGRPYAGVHRYLKELHME 60 (270)
T ss_pred CccCHHHHHHHHHHHHCCCEEEEecCCChHHHHHHHHHhCCC
Confidence 357889999999999999999999999999999999999973
No 88
>TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA. In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme.
Probab=73.57 E-value=5.1 Score=37.16 Aligned_cols=42 Identities=12% Similarity=0.174 Sum_probs=37.2
Q ss_pred CCCCcchHHHHHHHhhCCCcEEEEcCCC--------HHHHHHHHHHcccc
Q 003952 673 CPIREDSAKILSELKNSSQDLAMITGDQ--------ALTACYVASQVHIV 714 (784)
Q Consensus 673 d~lr~da~~~I~~L~~agi~v~MITGDn--------~~TA~~VA~~~gI~ 714 (784)
.++.|++.++++.|+++|+++.++|+.. ...+..+.+++|+.
T Consensus 24 ~~~~~~v~~~l~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~~l~~~~l~ 73 (132)
T TIGR01662 24 RILYPEVPDALAELKEAGYKVVIVTNQSGIGRGKFSSGRVARRLEELGVP 73 (132)
T ss_pred heeCCCHHHHHHHHHHCCCEEEEEECCccccccHHHHHHHHHHHHHCCCC
Confidence 4678999999999999999999999988 77788888888874
No 89
>PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=73.31 E-value=4.3 Score=43.04 Aligned_cols=42 Identities=14% Similarity=0.061 Sum_probs=38.7
Q ss_pred CCCCcchHHHHHHHhhCCCcEEEEcCCCHHHHHHHHHHcccc
Q 003952 673 CPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIV 714 (784)
Q Consensus 673 d~lr~da~~~I~~L~~agi~v~MITGDn~~TA~~VA~~~gI~ 714 (784)
+.+.++++++|+.|++.|+++++.||-....+..+++++|+.
T Consensus 20 ~~~~~~~~~ai~~l~~~Gi~~~iaTgR~~~~~~~~~~~l~l~ 61 (273)
T PRK00192 20 TYSYEPAKPALKALKEKGIPVIPCTSKTAAEVEVLRKELGLE 61 (273)
T ss_pred CcCcHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCC
Confidence 456688999999999999999999999999999999999975
No 90
>TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family. This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta
Probab=72.87 E-value=4.6 Score=42.34 Aligned_cols=40 Identities=13% Similarity=0.135 Sum_probs=36.7
Q ss_pred CCcchHHHHHHHhhCCCcEEEEcCCCHHHHHHHHHHcccc
Q 003952 675 IREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIV 714 (784)
Q Consensus 675 lr~da~~~I~~L~~agi~v~MITGDn~~TA~~VA~~~gI~ 714 (784)
.-+.+.++|+.|++.|++++++||-.+..+..+.+++|+.
T Consensus 17 ~~~~~~~~i~~l~~~g~~~~~~TgR~~~~~~~~~~~~~~~ 56 (256)
T TIGR01486 17 DWGPAKEVLERLQELGIPVIPCTSKTAAEVEYLRKELGLE 56 (256)
T ss_pred CchHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCC
Confidence 4456899999999999999999999999999999999974
No 91
>PRK10976 putative hydrolase; Provisional
Probab=72.84 E-value=4.4 Score=42.62 Aligned_cols=42 Identities=12% Similarity=0.174 Sum_probs=38.8
Q ss_pred CCCCcchHHHHHHHhhCCCcEEEEcCCCHHHHHHHHHHcccc
Q 003952 673 CPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIV 714 (784)
Q Consensus 673 d~lr~da~~~I~~L~~agi~v~MITGDn~~TA~~VA~~~gI~ 714 (784)
..+-+.+.++|++|+++||++++.||-....+..+.+++|+.
T Consensus 18 ~~is~~~~~ai~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~ 59 (266)
T PRK10976 18 HTLSPYAKETLKLLTARGIHFVFATGRHHVDVGQIRDNLEIK 59 (266)
T ss_pred CcCCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHhcCCC
Confidence 357889999999999999999999999999999999999974
No 92
>PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional
Probab=72.34 E-value=4.7 Score=42.62 Aligned_cols=42 Identities=17% Similarity=0.260 Sum_probs=39.2
Q ss_pred CCCCcchHHHHHHHhhCCCcEEEEcCCCHHHHHHHHHHcccc
Q 003952 673 CPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIV 714 (784)
Q Consensus 673 d~lr~da~~~I~~L~~agi~v~MITGDn~~TA~~VA~~~gI~ 714 (784)
..+-+.++++|++|++.|+++++.||=....+..+.+++|+.
T Consensus 18 ~~i~~~~~~ai~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~ 59 (272)
T PRK15126 18 HHLGEKTLSTLARLRERDITLTFATGRHVLEMQHILGALSLD 59 (272)
T ss_pred CcCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCC
Confidence 358899999999999999999999999999999999999974
No 93
>PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional
Probab=72.16 E-value=5.4 Score=42.01 Aligned_cols=41 Identities=12% Similarity=0.209 Sum_probs=38.3
Q ss_pred CCCcchHHHHHHHhhCCCcEEEEcCCCHHHHHHHHHHcccc
Q 003952 674 PIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIV 714 (784)
Q Consensus 674 ~lr~da~~~I~~L~~agi~v~MITGDn~~TA~~VA~~~gI~ 714 (784)
.+-+.++++|++|++.||++++.||=....+..+++++|+.
T Consensus 20 ~i~~~~~~ai~~~~~~G~~~~iaTGR~~~~~~~~~~~l~~~ 60 (272)
T PRK10530 20 TILPESLEALARAREAGYKVIIVTGRHHVAIHPFYQALALD 60 (272)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHhcCCC
Confidence 57889999999999999999999999999999999999874
No 94
>TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily. catalyze the same reaction as SPP.
Probab=72.00 E-value=5.4 Score=40.65 Aligned_cols=41 Identities=15% Similarity=0.214 Sum_probs=37.8
Q ss_pred CCCcchHHHHHHHhhCCCcEEEEcCCCHHHHHHHHHHcccc
Q 003952 674 PIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIV 714 (784)
Q Consensus 674 ~lr~da~~~I~~L~~agi~v~MITGDn~~TA~~VA~~~gI~ 714 (784)
.+-+.+.++|++|++.||++++.||-+...+..+++++|+.
T Consensus 15 ~i~~~~~~al~~l~~~Gi~~~~aTGR~~~~~~~~~~~l~~~ 55 (225)
T TIGR01482 15 AINESALEAIRKAESVGIPVVLVTGNSVQFARALAKLIGTP 55 (225)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCCC
Confidence 47788999999999999999999999999999999999953
No 95
>TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase. All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509).
Probab=71.95 E-value=7.9 Score=37.95 Aligned_cols=47 Identities=11% Similarity=0.099 Sum_probs=38.8
Q ss_pred CCCCcchHHHHHHHhhCCCcEEEEcCCCHHHHHHHHHHcccccCCcEEE
Q 003952 673 CPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLIL 721 (784)
Q Consensus 673 d~lr~da~~~I~~L~~agi~v~MITGDn~~TA~~VA~~~gI~~~~~~il 721 (784)
.++.|++.++++.|++.|+++.++|+- ..+..+-+..|+......+.
T Consensus 87 ~~~~~g~~~~l~~l~~~g~~i~i~S~~--~~~~~~l~~~~l~~~f~~v~ 133 (185)
T TIGR02009 87 AEVLPGIENFLKRLKKKGIAVGLGSSS--KNADRILAKLGLTDYFDAIV 133 (185)
T ss_pred CCCCcCHHHHHHHHHHcCCeEEEEeCc--hhHHHHHHHcChHHHCCEee
Confidence 478999999999999999999999986 56777888899875444444
No 96
>PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A ....
Probab=71.92 E-value=6.2 Score=37.74 Aligned_cols=48 Identities=13% Similarity=0.064 Sum_probs=42.6
Q ss_pred CCCcchHHHHHHHhhCCCcEEEEcCCCHHHHHHHHHHcccccCCcEEE
Q 003952 674 PIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLIL 721 (784)
Q Consensus 674 ~lr~da~~~I~~L~~agi~v~MITGDn~~TA~~VA~~~gI~~~~~~il 721 (784)
++.|++.+.++.|++.|++++++|+-.......+.++.|+......+.
T Consensus 77 ~~~~~~~~~L~~l~~~~~~~~i~Sn~~~~~~~~~l~~~~~~~~f~~i~ 124 (176)
T PF13419_consen 77 QPYPGVRELLERLKAKGIPLVIVSNGSRERIERVLERLGLDDYFDEII 124 (176)
T ss_dssp EESTTHHHHHHHHHHTTSEEEEEESSEHHHHHHHHHHTTHGGGCSEEE
T ss_pred chhhhhhhhhhhcccccceeEEeecCCccccccccccccccccccccc
Confidence 568999999999999999999999999999999999999985544444
No 97
>PRK14988 GMP/IMP nucleotidase; Provisional
Probab=71.26 E-value=9.7 Score=39.12 Aligned_cols=49 Identities=20% Similarity=0.265 Sum_probs=41.8
Q ss_pred CCCCcchHHHHHHHhhCCCcEEEEcCCCHHHHHHHHHHcccccCCcEEE
Q 003952 673 CPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLIL 721 (784)
Q Consensus 673 d~lr~da~~~I~~L~~agi~v~MITGDn~~TA~~VA~~~gI~~~~~~il 721 (784)
-++.|++.+.++.|++.|+++.++|.-+...+...-+..|+.+....++
T Consensus 92 ~~~~~g~~e~L~~Lk~~g~~~~i~Tn~~~~~~~~~l~~~~l~~~fd~iv 140 (224)
T PRK14988 92 AVLREDTVPFLEALKASGKRRILLTNAHPHNLAVKLEHTGLDAHLDLLL 140 (224)
T ss_pred CCcCCCHHHHHHHHHhCCCeEEEEeCcCHHHHHHHHHHCCcHHHCCEEE
Confidence 4678999999999999999999999988888888888899876444444
No 98
>TIGR01675 plant-AP plant acid phosphatase. This model explicitly excludes the VSPs which lack the nucleophilc aspartate. The possibility exists, however, that some members of this family may, while containing all of the conserved HAD-superfamily catalytic residues, lack activity and have a function related to the function of the VSPs rather than the acid phosphatases.
Probab=71.25 E-value=14 Score=38.23 Aligned_cols=90 Identities=12% Similarity=0.130 Sum_probs=57.7
Q ss_pred cCCCCcchHHHHHHHhhCCCcEEEEcCCCHHHHHHH---HHHcccccCCcEEEecCCCCCeeEEeCCCcccccccchhhh
Q 003952 672 NCPIREDSAKILSELKNSSQDLAMITGDQALTACYV---ASQVHIVTKPVLILCPVKNGKVYEWVSPDETEKIQYSEKEV 748 (784)
Q Consensus 672 ~d~lr~da~~~I~~L~~agi~v~MITGDn~~TA~~V---A~~~gI~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~ 748 (784)
+.|.-|++.+.++.|++.|++|+++||=......+. =++.|+..-..+++.+..+. ......+|....
T Consensus 118 ~apaip~al~l~~~l~~~G~~Vf~lTGR~e~~r~~T~~nL~~~G~~~~~~LiLR~~~d~---------~~~~~~yKs~~R 188 (229)
T TIGR01675 118 AAPALPEGLKLYQKIIELGIKIFLLSGRWEELRNATLDNLINAGFTGWKHLILRGLEDS---------NKTVVTYKSEVR 188 (229)
T ss_pred CCCCCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHHcCCCCcCeeeecCCCCC---------CchHhHHHHHHH
Confidence 347789999999999999999999999887552222 24467664455666331110 111223343333
Q ss_pred hccC-CCee-EEEechhHHHHhcC
Q 003952 749 EGLT-DAHD-LCIGGDCFEMLQQT 770 (784)
Q Consensus 749 ~~l~-~~~~-l~~tGd~l~~l~~~ 770 (784)
+++. +.|. +...||-++.|...
T Consensus 189 ~~l~~~GYrIv~~iGDq~sDl~G~ 212 (229)
T TIGR01675 189 KSLMEEGYRIWGNIGDQWSDLLGS 212 (229)
T ss_pred HHHHhCCceEEEEECCChHHhcCC
Confidence 3333 4566 66899999999764
No 99
>PLN02645 phosphoglycolate phosphatase
Probab=70.38 E-value=5.3 Score=43.39 Aligned_cols=55 Identities=13% Similarity=0.158 Sum_probs=43.3
Q ss_pred EEEeecCCCCcchHHHHHHHhhCCCcEEEEcCCCHHHHHHHH---HHcccccCCcEEE
Q 003952 667 GFAVFNCPIREDSAKILSELKNSSQDLAMITGDQALTACYVA---SQVHIVTKPVLIL 721 (784)
Q Consensus 667 G~l~~~d~lr~da~~~I~~L~~agi~v~MITGDn~~TA~~VA---~~~gI~~~~~~il 721 (784)
|.+.-.+.+=|++.++|+.|++.|++++++|+....+...++ +++|+......++
T Consensus 37 Gtl~~~~~~~~ga~e~l~~lr~~g~~~~~~TN~~~~~~~~~~~~l~~lGi~~~~~~I~ 94 (311)
T PLN02645 37 GVIWKGDKLIEGVPETLDMLRSMGKKLVFVTNNSTKSRAQYGKKFESLGLNVTEEEIF 94 (311)
T ss_pred CCeEeCCccCcCHHHHHHHHHHCCCEEEEEeCCCCCCHHHHHHHHHHCCCCCChhhEe
Confidence 555555666799999999999999999999999988887777 5678764444444
No 100
>TIGR01684 viral_ppase viral phosphatase. These proteins also include an N-terminal domain (ca. 125 aas) that is unique to this clade.
Probab=70.35 E-value=10 Score=40.53 Aligned_cols=47 Identities=19% Similarity=0.101 Sum_probs=41.2
Q ss_pred CC-cchHHHHHHHhhCCCcEEEEcCCCHHHHHHHHHHcccccCCcEEE
Q 003952 675 IR-EDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLIL 721 (784)
Q Consensus 675 lr-~da~~~I~~L~~agi~v~MITGDn~~TA~~VA~~~gI~~~~~~il 721 (784)
+| |++.+++++|++.|+++.+.|+=....+.++-+++||......+.
T Consensus 146 irdPgV~EaL~~LkekGikLaIaTS~~Re~v~~~L~~lGLd~YFdvII 193 (301)
T TIGR01684 146 IRDPRIYDSLTELKKRGCILVLWSYGDRDHVVESMRKVKLDRYFDIII 193 (301)
T ss_pred cCCHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHcCCCcccCEEE
Confidence 67 999999999999999999999988889999999999986544444
No 101
>PRK13478 phosphonoacetaldehyde hydrolase; Provisional
Probab=70.32 E-value=19 Score=38.02 Aligned_cols=43 Identities=9% Similarity=0.027 Sum_probs=38.1
Q ss_pred CCCCcchHHHHHHHhhCCCcEEEEcCCCHHHHHHHHHHccccc
Q 003952 673 CPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVT 715 (784)
Q Consensus 673 d~lr~da~~~I~~L~~agi~v~MITGDn~~TA~~VA~~~gI~~ 715 (784)
.++.|++.++++.|++.|+++.++||.....+..+-+..|+..
T Consensus 100 ~~~~pg~~elL~~L~~~g~~l~I~T~~~~~~~~~~l~~~~l~~ 142 (267)
T PRK13478 100 ATPIPGVLEVIAALRARGIKIGSTTGYTREMMDVVVPLAAAQG 142 (267)
T ss_pred CCCCCCHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHHhhcC
Confidence 3678999999999999999999999999988888888887764
No 102
>TIGR01990 bPGM beta-phosphoglucomutase. The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state.
Probab=70.29 E-value=9.2 Score=37.46 Aligned_cols=47 Identities=15% Similarity=0.231 Sum_probs=36.4
Q ss_pred CCCCcchHHHHHHHhhCCCcEEEEcCCCHHHHHHHHHHcccccCCcEEE
Q 003952 673 CPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLIL 721 (784)
Q Consensus 673 d~lr~da~~~I~~L~~agi~v~MITGDn~~TA~~VA~~~gI~~~~~~il 721 (784)
.++.|++.++|+.|+++|+++.++|+-. .+..+-+..|+......++
T Consensus 86 ~~~~pg~~~~L~~L~~~g~~~~i~s~~~--~~~~~l~~~~l~~~f~~~~ 132 (185)
T TIGR01990 86 ADVLPGIKNLLDDLKKNNIKIALASASK--NAPTVLEKLGLIDYFDAIV 132 (185)
T ss_pred cccCccHHHHHHHHHHCCCeEEEEeCCc--cHHHHHHhcCcHhhCcEEE
Confidence 3678999999999999999999999643 2456778888865444444
No 103
>PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=70.16 E-value=6.3 Score=41.76 Aligned_cols=41 Identities=10% Similarity=0.088 Sum_probs=37.3
Q ss_pred CCCcchHHHHHHHhhCCCcEEEEcCCCHHHHHHHHHHcccc
Q 003952 674 PIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIV 714 (784)
Q Consensus 674 ~lr~da~~~I~~L~~agi~v~MITGDn~~TA~~VA~~~gI~ 714 (784)
.+-+.++++|++|++.||++++.||=....+..+++++|+.
T Consensus 24 ~i~~~~~~ai~~l~~~Gi~~viaTGR~~~~i~~~~~~l~~~ 64 (271)
T PRK03669 24 YDWQPAAPWLTRLREAQVPVILCSSKTAAEMLPLQQTLGLQ 64 (271)
T ss_pred cCcHHHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHhCCC
Confidence 34567999999999999999999999999999999999973
No 104
>TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458. This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published.
Probab=69.93 E-value=5.8 Score=41.77 Aligned_cols=55 Identities=9% Similarity=0.071 Sum_probs=39.9
Q ss_pred EEEeecCC----CCcchHHHHHHHhhCCCcEEEEcCCCHHH---HHHHHHHcccccCCcEEE
Q 003952 667 GFAVFNCP----IREDSAKILSELKNSSQDLAMITGDQALT---ACYVASQVHIVTKPVLIL 721 (784)
Q Consensus 667 G~l~~~d~----lr~da~~~I~~L~~agi~v~MITGDn~~T---A~~VA~~~gI~~~~~~il 721 (784)
|.+.-.+. +=|++.++|+.|++.|++++++||.+..+ .....+++|+.-....++
T Consensus 10 Gtl~~~~~~~~~~~~~a~~al~~l~~~G~~~~~~Tn~~~~~~~~~~~~l~~~g~~~~~~~i~ 71 (257)
T TIGR01458 10 GVLYISDAKSGVAVPGSQEAVKRLRGASVKVRFVTNTTKESKQDLLERLQRLGFDISEDEVF 71 (257)
T ss_pred CeEEeCCCcccCcCCCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHHcCCCCCHHHeE
Confidence 45555555 77899999999999999999999977776 444455678753333343
No 105
>TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit. Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases.
Probab=69.72 E-value=4.9 Score=39.50 Aligned_cols=34 Identities=21% Similarity=0.135 Sum_probs=32.4
Q ss_pred HHHHHHhhCCCcEEEEcCCCHHHHHHHHHHcccc
Q 003952 681 KILSELKNSSQDLAMITGDQALTACYVASQVHIV 714 (784)
Q Consensus 681 ~~I~~L~~agi~v~MITGDn~~TA~~VA~~~gI~ 714 (784)
..|+.|+++|+++.++|+.+...+....+.+|+.
T Consensus 41 ~~~~~L~~~Gi~laIiT~k~~~~~~~~l~~lgi~ 74 (169)
T TIGR02726 41 MGVIVLQLCGIDVAIITSKKSGAVRHRAEELKIK 74 (169)
T ss_pred HHHHHHHHCCCEEEEEECCCcHHHHHHHHHCCCc
Confidence 4899999999999999999999999999999996
No 106
>TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase. Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes.
Probab=66.79 E-value=14 Score=36.89 Aligned_cols=47 Identities=13% Similarity=0.188 Sum_probs=36.8
Q ss_pred CCCcchHHHHHHHhhCCCcEEEEcCCCHHHHHHHHHHcccccCCcEEE
Q 003952 674 PIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLIL 721 (784)
Q Consensus 674 ~lr~da~~~I~~L~~agi~v~MITGDn~~TA~~VA~~~gI~~~~~~il 721 (784)
++-|++.++++.|++.|+++.++|+-.. .+..+-+..|+......+.
T Consensus 105 ~~~~g~~~~l~~L~~~g~~~~i~Sn~~~-~~~~~l~~~~l~~~fd~i~ 151 (203)
T TIGR02252 105 QVYPDAIKLLKDLRERGLILGVISNFDS-RLRGLLEALGLLEYFDFVV 151 (203)
T ss_pred eeCcCHHHHHHHHHHCCCEEEEEeCCch-hHHHHHHHCCcHHhcceEE
Confidence 5689999999999999999999997554 4567778888864444443
No 107
>PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification []. This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A ....
Probab=66.56 E-value=8.7 Score=39.28 Aligned_cols=42 Identities=19% Similarity=0.226 Sum_probs=39.2
Q ss_pred CCCCcchHHHHHHHhhCCCcEEEEcCCCHHHHHHHHHHcccc
Q 003952 673 CPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIV 714 (784)
Q Consensus 673 d~lr~da~~~I~~L~~agi~v~MITGDn~~TA~~VA~~~gI~ 714 (784)
..+-+.+.++|++|+++|+++++.||-.+..+..+.+++++.
T Consensus 14 ~~i~~~~~~al~~l~~~g~~~~i~TGR~~~~~~~~~~~~~~~ 55 (254)
T PF08282_consen 14 GKISPETIEALKELQEKGIKLVIATGRSYSSIKRLLKELGID 55 (254)
T ss_dssp SSSCHHHHHHHHHHHHTTCEEEEECSSTHHHHHHHHHHTTHC
T ss_pred CeeCHHHHHHHHhhcccceEEEEEccCcccccccccccccch
Confidence 356789999999999999999999999999999999999985
No 108
>PRK10444 UMP phosphatase; Provisional
Probab=66.42 E-value=5.4 Score=41.80 Aligned_cols=48 Identities=15% Similarity=0.181 Sum_probs=41.9
Q ss_pred EEEeecCCCCcchHHHHHHHhhCCCcEEEEcCCCHHHHHHHHHHc---ccc
Q 003952 667 GFAVFNCPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQV---HIV 714 (784)
Q Consensus 667 G~l~~~d~lr~da~~~I~~L~~agi~v~MITGDn~~TA~~VA~~~---gI~ 714 (784)
|.+.-.+.+=|++.++|+.|++.|++++.+||....+...+++++ |+.
T Consensus 10 GtL~~~~~~~p~a~~~l~~L~~~g~~~~~~Tn~~~~~~~~~~~~l~~~G~~ 60 (248)
T PRK10444 10 GVLMHDNVAVPGAAEFLHRILDKGLPLVLLTNYPSQTGQDLANRFATAGVD 60 (248)
T ss_pred CceEeCCeeCccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCC
Confidence 566666778899999999999999999999999999998888885 663
No 109
>TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those.
Probab=66.42 E-value=10 Score=39.69 Aligned_cols=55 Identities=9% Similarity=0.080 Sum_probs=41.2
Q ss_pred EEEeecCCCCcchHHHHHHHhhCCCcEEEEcC---CCHHHHHHHHHHcccccCCcEEE
Q 003952 667 GFAVFNCPIREDSAKILSELKNSSQDLAMITG---DQALTACYVASQVHIVTKPVLIL 721 (784)
Q Consensus 667 G~l~~~d~lr~da~~~I~~L~~agi~v~MITG---Dn~~TA~~VA~~~gI~~~~~~il 721 (784)
|.+.-.+.+=|++.++|+.|++.|++++.+|| -.+.......+++|+......++
T Consensus 10 Gtl~~~~~~i~~a~~~l~~l~~~g~~~~~~Tnn~~r~~~~~~~~l~~~g~~~~~~~ii 67 (249)
T TIGR01457 10 GTMYKGKERIPEAETFVHELQKRDIPYLFVTNNSTRTPESVAEMLASFDIPATLETVF 67 (249)
T ss_pred CceEcCCeeCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCCChhhEe
Confidence 44444556667999999999999999999997 55777777778888763333343
No 110
>PF00122 E1-E2_ATPase: E1-E2 ATPase p-type cation-transporting ATPase superfamily signature H+-transporting ATPase (proton pump) signature sodium/potassium-transporting ATPase signature; InterPro: IPR008250 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane. ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the actuator (A) domain, and some transmembrane helices found in P-type ATPases []. It contains the TGES-loop which is essential for the metal ion binding which results in tight association between the A and P (phosphorylation) domains []. It does not contain the phosphorylation site. It is thought that the large movement of the actuator domain, which is transmitted to the transmembrane helices, is essential to the long distance coupling between formation/decomposition of the acyl phosphate in the cytoplasmic P-domain and the changes in the ion-binding sites buried deep in the membranous region []. This domain has a modulatory effect on the phosphoenzyme processing steps through its nucleotide binding [],[]. P-type (or E1-E2-type) ATPases that form an aspartyl phosphate intermediate in the course of ATP hydrolysis, can be divided into 4 major groups []: (1) Ca2+-transporting ATPases; (2) Na+/K+- and gastric H+/K+-transporting ATPases; (3) plasma membrane H+-transporting ATPases (proton pumps) of plants, fungi and lower eukaryotes; and (4) all bacterial P-type ATPases, except the g2+-ATPase of Salmonella typhimurium, which is more similar to the eukaryotic sequences. However, great variety of sequence analysis methods results in diversity of classification. More information about this protein can be found at Protein of the Month: ATP Synthases [].; GO: 0000166 nucleotide binding, 0046872 metal ion binding; PDB: 2XZB_A 1MHS_B 3TLM_A 3A3Y_A 2ZXE_A 3NAL_A 3NAM_A 3NAN_A 2YJ6_B 2IYE_A ....
Probab=65.90 E-value=1.1e+02 Score=31.24 Aligned_cols=61 Identities=18% Similarity=0.254 Sum_probs=39.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHh---hh--h---CCceEEE----EEcCeEEEeecCCCCCCcEEEEcCC
Q 003952 224 FTLFMLFMFESTMAKSRLKTLTEIRR---VR--V---DNQTIMV----HRCGKWVKLAGTDLVPGDVVSIGRS 284 (784)
Q Consensus 224 ~~l~~l~~~~~~~~~~~~~~~~~l~~---~~--~---~~~~v~V----~R~g~~~~I~s~~LvpGDiV~i~~g 284 (784)
+++++..+++....+++.+..+++++ .. . +.....+ ++-|....+...|.+|-|.+.++.|
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~r~~~~~~i~~~~L~~GDiI~l~~g~~vPaD~~ll~~g 76 (230)
T PF00122_consen 4 FLILLSNIIEIWQEYRSKKQLKKLNNLNPQKKVTVIRDGRWQKIPSSELVPGDIIILKAGDIVPADGILLESG 76 (230)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHCTTSSSEEEEEEETTEEEEEEGGGT-TTSEEEEETTEBESSEEEEEESS
T ss_pred EEhHHHHHHHHHHHHHHHHHHHHHhccCCCccEEEEeccccccchHhhccceeeeecccccccccCccceecc
Confidence 34555555667777777777777643 11 1 2222233 2468899999999999999999833
No 111
>PRK11590 hypothetical protein; Provisional
Probab=65.79 E-value=12 Score=37.92 Aligned_cols=41 Identities=20% Similarity=0.062 Sum_probs=37.2
Q ss_pred CCCcchHHHH-HHHhhCCCcEEEEcCCCHHHHHHHHHHcccc
Q 003952 674 PIREDSAKIL-SELKNSSQDLAMITGDQALTACYVASQVHIV 714 (784)
Q Consensus 674 ~lr~da~~~I-~~L~~agi~v~MITGDn~~TA~~VA~~~gI~ 714 (784)
.+.|++.+.| +.|++.|++++++|+-....+..+++.+|+.
T Consensus 95 ~~~pga~e~L~~~l~~~G~~l~IvSas~~~~~~~il~~l~~~ 136 (211)
T PRK11590 95 TAFPVVQERLTTYLLSSDADVWLITGSPQPLVEQVYFDTPWL 136 (211)
T ss_pred cCCccHHHHHHHHHHhCCCEEEEEeCCcHHHHHHHHHHcccc
Confidence 4589999999 5789999999999999999999999999963
No 112
>TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein. This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate.
Probab=65.73 E-value=8 Score=39.41 Aligned_cols=38 Identities=16% Similarity=0.266 Sum_probs=35.5
Q ss_pred cchHHHHHHHhhCCCcEEEEcCCCHHHHHHHHHHcccc
Q 003952 677 EDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIV 714 (784)
Q Consensus 677 ~da~~~I~~L~~agi~v~MITGDn~~TA~~VA~~~gI~ 714 (784)
+.++++|+.|++.|++++++||=....+..+++++|+.
T Consensus 19 ~~~~~~l~~l~~~gi~~~i~TgR~~~~~~~~~~~l~~~ 56 (221)
T TIGR02463 19 QPAAPWLTRLQEAGIPVILCTSKTAAEVEYLQKALGLT 56 (221)
T ss_pred HHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCC
Confidence 44899999999999999999999999999999999974
No 113
>PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated
Probab=64.96 E-value=20 Score=41.21 Aligned_cols=48 Identities=6% Similarity=0.027 Sum_probs=43.1
Q ss_pred CCCcchHHHHHHHhhCCCcEEEEcCCCHHHHHHHHHHcccccCCcEEE
Q 003952 674 PIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLIL 721 (784)
Q Consensus 674 ~lr~da~~~I~~L~~agi~v~MITGDn~~TA~~VA~~~gI~~~~~~il 721 (784)
++.|++.++++.|++.|+++.++|+-....+..+-+.+|+.+....++
T Consensus 330 ~l~pG~~e~L~~Lk~~g~~l~IvS~~~~~~~~~~l~~~~l~~~f~~i~ 377 (459)
T PRK06698 330 ALYPNVKEIFTYIKENNCSIYIASNGLTEYLRAIVSYYDLDQWVTETF 377 (459)
T ss_pred CcCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHCCcHhhcceeE
Confidence 789999999999999999999999999999999999999976544444
No 114
>TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668. This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family.
Probab=64.58 E-value=11 Score=36.89 Aligned_cols=41 Identities=17% Similarity=0.188 Sum_probs=35.7
Q ss_pred CCCcchHHHHHHHhhCCCcEEEEcCCC-HHHHHHHHHHcccc
Q 003952 674 PIREDSAKILSELKNSSQDLAMITGDQ-ALTACYVASQVHIV 714 (784)
Q Consensus 674 ~lr~da~~~I~~L~~agi~v~MITGDn-~~TA~~VA~~~gI~ 714 (784)
.+-|++.++++.|++.|+++.++|+-+ ...+..+++.+|+.
T Consensus 43 ~~~pgv~e~L~~Lk~~g~~l~I~Sn~~~~~~~~~~~~~~gl~ 84 (170)
T TIGR01668 43 EAYPALRDWIEELKAAGRKLLIVSNNAGEQRAKAVEKALGIP 84 (170)
T ss_pred CcChhHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHcCCE
Confidence 568999999999999999999999987 56777888888874
No 115
>PLN02575 haloacid dehalogenase-like hydrolase
Probab=64.02 E-value=22 Score=39.67 Aligned_cols=49 Identities=16% Similarity=0.147 Sum_probs=43.5
Q ss_pred CCCcchHHHHHHHhhCCCcEEEEcCCCHHHHHHHHHHcccccCCcEEEe
Q 003952 674 PIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLILC 722 (784)
Q Consensus 674 ~lr~da~~~I~~L~~agi~v~MITGDn~~TA~~VA~~~gI~~~~~~il~ 722 (784)
++.|++.++++.|++.|+++.++|+-+...+..+=+..||.+....+..
T Consensus 216 ~l~pGa~ElL~~Lk~~GiklaIaSn~~~~~~~~~L~~lgL~~yFd~Iv~ 264 (381)
T PLN02575 216 RLRTGSQEFVNVLMNYKIPMALVSTRPRKTLENAIGSIGIRGFFSVIVA 264 (381)
T ss_pred CcCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCHHHceEEEe
Confidence 5789999999999999999999999999999999999999865555553
No 116
>COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only]
Probab=63.41 E-value=8.8 Score=36.89 Aligned_cols=34 Identities=24% Similarity=0.176 Sum_probs=32.1
Q ss_pred HHHHHHhhCCCcEEEEcCCCHHHHHHHHHHcccc
Q 003952 681 KILSELKNSSQDLAMITGDQALTACYVASQVHIV 714 (784)
Q Consensus 681 ~~I~~L~~agi~v~MITGDn~~TA~~VA~~~gI~ 714 (784)
-.|+.|.++||++-+|||-+...+..=|+++||-
T Consensus 42 ~Gik~l~~~Gi~vAIITGr~s~ive~Ra~~LGI~ 75 (170)
T COG1778 42 HGIKLLLKSGIKVAIITGRDSPIVEKRAKDLGIK 75 (170)
T ss_pred HHHHHHHHcCCeEEEEeCCCCHHHHHHHHHcCCc
Confidence 3799999999999999999999999999999996
No 117
>PHA02530 pseT polynucleotide kinase; Provisional
Probab=62.83 E-value=8.8 Score=41.17 Aligned_cols=46 Identities=7% Similarity=0.070 Sum_probs=42.8
Q ss_pred eecCCCCcchHHHHHHHhhCCCcEEEEcCCCHHHHHHHHHHccccc
Q 003952 670 VFNCPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVT 715 (784)
Q Consensus 670 ~~~d~lr~da~~~I~~L~~agi~v~MITGDn~~TA~~VA~~~gI~~ 715 (784)
...+++.+++.++|+.|++.|++++++||-...++..+.+.+|+..
T Consensus 183 ~~~~~~~~~~~~~l~~l~~~g~~i~i~T~r~~~~~~~~l~~l~~~~ 228 (300)
T PHA02530 183 VKEDKPNPMVVELVKMYKAAGYEIIVVSGRDGVCEEDTVEWLRQTD 228 (300)
T ss_pred cccCCCChhHHHHHHHHHhCCCEEEEEeCCChhhHHHHHHHHHHcC
Confidence 3678899999999999999999999999999999999999999874
No 118
>COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=62.06 E-value=1.3e+02 Score=37.82 Aligned_cols=91 Identities=19% Similarity=0.204 Sum_probs=51.7
Q ss_pred ccHHHHHHHHhhhhHHHHHHHhhhhcccchhhhhHHHHHHHHHHHHHHH---HHHHHHHHHHHHhhhh----CCceEEE-
Q 003952 188 PTFQKLMKENCMEPFFVFQVFCVGLWCLDEYWYYSLFTLFMLFMFESTM---AKSRLKTLTEIRRVRV----DNQTIMV- 259 (784)
Q Consensus 188 ~s~~~ll~~~~~~pf~vfqi~~~~lw~l~~y~~~~~~~l~~l~~~~~~~---~~~~~~~~~~l~~~~~----~~~~v~V- 259 (784)
.++..+|......++++.++.+.. .+++....++ ++..+..... ..+..++++++..-.. +.....+
T Consensus 80 ~~~~~iL~~~a~~s~~~~~~~~~~----~~~~~I~~~i-~~n~~~g~~qe~~a~~~l~~lk~~~~~~~~V~R~g~~~~i~ 154 (917)
T COG0474 80 DPFIILLLVAALLSAFVGDWVDAG----VDAIVILLVV-VINALLGFVQEYRAEKALEALKKMSSPKAKVLRDGKFVEIP 154 (917)
T ss_pred HHHHHHHHHHHHHHHHhhcccccC----cceeeehHHH-HHHHHHHHHHHHHHHHHHHHHHhhccCceEEEeCCcEEEec
Confidence 456667777777777766665443 3333333333 3322222322 2233455554443322 2333333
Q ss_pred ---EEcCeEEEeecCCCCCCcEEEEcC
Q 003952 260 ---HRCGKWVKLAGTDLVPGDVVSIGR 283 (784)
Q Consensus 260 ---~R~g~~~~I~s~~LvpGDiV~i~~ 283 (784)
++-|....+.+.|.+|-|...|+.
T Consensus 155 a~eLVpGDiV~l~~gd~vPAD~rLl~~ 181 (917)
T COG0474 155 ASELVPGDIVLLEAGDVVPADLRLLES 181 (917)
T ss_pred HHHCCCCcEEEECCCCccccceEEEEe
Confidence 346889999999999999999984
No 119
>PRK06769 hypothetical protein; Validated
Probab=61.62 E-value=14 Score=36.25 Aligned_cols=28 Identities=14% Similarity=0.114 Sum_probs=25.4
Q ss_pred CCCcchHHHHHHHhhCCCcEEEEcCCCH
Q 003952 674 PIREDSAKILSELKNSSQDLAMITGDQA 701 (784)
Q Consensus 674 ~lr~da~~~I~~L~~agi~v~MITGDn~ 701 (784)
++.|+++++++.|++.|+++.++|+...
T Consensus 28 ~~~pgv~e~L~~Lk~~G~~l~I~Tn~~~ 55 (173)
T PRK06769 28 TLFPFTKASLQKLKANHIKIFSFTNQPG 55 (173)
T ss_pred EECCCHHHHHHHHHHCCCEEEEEECCch
Confidence 4789999999999999999999998764
No 120
>PF13380 CoA_binding_2: CoA binding domain; PDB: 3FF4_A 2D5A_A 2D59_A 2E6U_X 1IUL_A 1IUK_A 1Y81_A 2DUW_A.
Probab=61.21 E-value=11 Score=34.56 Aligned_cols=87 Identities=14% Similarity=0.082 Sum_probs=49.1
Q ss_pred HHHHHHHhhccCeEEEEEEEeCCCCChhhHhhhhhhhccCCcEEEEEEeecCCCCcchHHHHHHHhhCCC-cEEEEcCCC
Q 003952 622 IETYKKYTHQGSRVLALAFKSLPDMTVSDARSLHRDEVENGLTFAGFAVFNCPIREDSAKILSELKNSSQ-DLAMITGDQ 700 (784)
Q Consensus 622 ~~~~~~~~~~G~Rvlala~k~l~~~~~~~~~~~~r~~~E~~l~flG~l~~~d~lr~da~~~I~~L~~agi-~v~MITGDn 700 (784)
...++.+.+.|++|..+.-|.-+-....-..++....-.-|+.. -.-..+.+.++++++.+.|+ .+|+.+|..
T Consensus 17 ~~v~~~l~~~G~~v~~Vnp~~~~i~G~~~y~sl~e~p~~iDlav------v~~~~~~~~~~v~~~~~~g~~~v~~~~g~~ 90 (116)
T PF13380_consen 17 YRVLRNLKAAGYEVYPVNPKGGEILGIKCYPSLAEIPEPIDLAV------VCVPPDKVPEIVDEAAALGVKAVWLQPGAE 90 (116)
T ss_dssp HHHHHHHHHTT-EEEEESTTCSEETTEE-BSSGGGCSST-SEEE------E-S-HHHHHHHHHHHHHHT-SEEEE-TTS-
T ss_pred HHHHHHHHhCCCEEEEECCCceEECcEEeeccccCCCCCCCEEE------EEcCHHHHHHHHHHHHHcCCCEEEEEcchH
Confidence 34567777899999988643211000000111111001223322 22346789999999999999 589999999
Q ss_pred HHHHHHHHHHcccc
Q 003952 701 ALTACYVASQVHIV 714 (784)
Q Consensus 701 ~~TA~~VA~~~gI~ 714 (784)
...+...|++.||-
T Consensus 91 ~~~~~~~a~~~gi~ 104 (116)
T PF13380_consen 91 SEELIEAAREAGIR 104 (116)
T ss_dssp -HHHHHHHHHTT-E
T ss_pred HHHHHHHHHHcCCE
Confidence 99999999999884
No 121
>TIGR01685 MDP-1 magnesium-dependent phosphatase-1. This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues.
Probab=60.27 E-value=15 Score=36.38 Aligned_cols=51 Identities=16% Similarity=0.115 Sum_probs=43.1
Q ss_pred EEEEEEeecCCCCcchHHHHHHHhhCCCcEEEEcC-CCHHHHHHHHHHcccc
Q 003952 664 TFAGFAVFNCPIREDSAKILSELKNSSQDLAMITG-DQALTACYVASQVHIV 714 (784)
Q Consensus 664 ~flG~l~~~d~lr~da~~~I~~L~~agi~v~MITG-Dn~~TA~~VA~~~gI~ 714 (784)
.......-+-++.|++.++++.|+++|+++.++|+ |...++..+-...||.
T Consensus 35 ~~~~~~~~~~~l~pGv~elL~~Lk~~G~~l~I~Sn~~~~~~~~~~L~~~~l~ 86 (174)
T TIGR01685 35 IIIDKSGTEVTLIKEVRDVLQTLKDAGTYLATASWNDVPEWAYEILGTFEIT 86 (174)
T ss_pred eEEeCCCCEEEEcccHHHHHHHHHHCCCEEEEEeCCCChHHHHHHHHhCCcC
Confidence 34455555668899999999999999999999996 4889999999999985
No 122
>PLN02811 hydrolase
Probab=59.75 E-value=27 Score=35.59 Aligned_cols=34 Identities=12% Similarity=0.205 Sum_probs=28.8
Q ss_pred cCCCCcchHHHHHHHhhCCCcEEEEcCCCHHHHH
Q 003952 672 NCPIREDSAKILSELKNSSQDLAMITGDQALTAC 705 (784)
Q Consensus 672 ~d~lr~da~~~I~~L~~agi~v~MITGDn~~TA~ 705 (784)
..++.|++.+.|+.|++.|+++.++||-+.....
T Consensus 76 ~~~l~~gv~e~l~~L~~~g~~~~i~S~~~~~~~~ 109 (220)
T PLN02811 76 TSDLMPGAERLVRHLHAKGIPIAIATGSHKRHFD 109 (220)
T ss_pred hCCCCccHHHHHHHHHHCCCcEEEEeCCchhhHH
Confidence 3467899999999999999999999997765443
No 123
>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)
Probab=58.83 E-value=15 Score=38.12 Aligned_cols=56 Identities=9% Similarity=0.122 Sum_probs=41.2
Q ss_pred EEEeecCCCCcchHHHHHHHhhCCCcEEEEcCCCHHHHH--HHHHHccccc-CCcEEEe
Q 003952 667 GFAVFNCPIREDSAKILSELKNSSQDLAMITGDQALTAC--YVASQVHIVT-KPVLILC 722 (784)
Q Consensus 667 G~l~~~d~lr~da~~~I~~L~~agi~v~MITGDn~~TA~--~VA~~~gI~~-~~~~il~ 722 (784)
|.+.-...+-|+++++++.|+++|+++.++|.-....+. ...++.|+.. ....+..
T Consensus 17 G~l~~~~~~~pga~e~L~~L~~~G~~~~ivTN~~~~~~~~~~~L~~~gl~~~~~~~Ii~ 75 (242)
T TIGR01459 17 GVIIDGNHTYPGAVQNLNKIIAQGKPVYFVSNSPRNIFSLHKTLKSLGINADLPEMIIS 75 (242)
T ss_pred cccccCCccCccHHHHHHHHHHCCCEEEEEeCCCCChHHHHHHHHHCCCCccccceEEc
Confidence 445556778899999999999999999999995443333 4567888864 4445543
No 124
>TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E. HAD subfamilies caused by an overly broad single model.
Probab=57.67 E-value=25 Score=33.24 Aligned_cols=46 Identities=20% Similarity=0.197 Sum_probs=36.9
Q ss_pred CCcchHHHHHHHhhCCCcEEEEcCCCHHHHHHHHHHcccccCCcEEE
Q 003952 675 IREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLIL 721 (784)
Q Consensus 675 lr~da~~~I~~L~~agi~v~MITGDn~~TA~~VA~~~gI~~~~~~il 721 (784)
..+++.+.++.|++.|+++.++|+-....+....+.. +......+.
T Consensus 65 ~~~g~~e~l~~L~~~g~~~~i~T~~~~~~~~~~~~~~-l~~~f~~i~ 110 (154)
T TIGR01549 65 YIRGAADLLKRLKEAGIKLGIISNGSLRAQKLLLRKH-LGDYFDLIL 110 (154)
T ss_pred eccCHHHHHHHHHHCcCeEEEEeCCchHHHHHHHHHH-HHhcCcEEE
Confidence 3479999999999999999999999999998888876 443333333
No 125
>PLN02940 riboflavin kinase
Probab=57.57 E-value=20 Score=40.22 Aligned_cols=50 Identities=10% Similarity=0.056 Sum_probs=40.4
Q ss_pred CCCCcchHHHHHHHhhCCCcEEEEcCCCHHHHHHHHH-HcccccCCcEEEe
Q 003952 673 CPIREDSAKILSELKNSSQDLAMITGDQALTACYVAS-QVHIVTKPVLILC 722 (784)
Q Consensus 673 d~lr~da~~~I~~L~~agi~v~MITGDn~~TA~~VA~-~~gI~~~~~~il~ 722 (784)
-++.|++.++++.|++.|+++.++|+-....+...-+ ..|+.+....++.
T Consensus 92 ~~l~pGv~elL~~Lk~~g~~l~IvTn~~~~~~~~~l~~~~gl~~~Fd~ii~ 142 (382)
T PLN02940 92 IKALPGANRLIKHLKSHGVPMALASNSPRANIEAKISCHQGWKESFSVIVG 142 (382)
T ss_pred CCCCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHhccChHhhCCEEEe
Confidence 3568999999999999999999999998888777665 6788655445543
No 126
>COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only]
Probab=56.68 E-value=22 Score=34.60 Aligned_cols=80 Identities=16% Similarity=0.174 Sum_probs=53.3
Q ss_pred HHHHHHHHhhccCeEEEEEEEeCCCCChhhHhhhhhhhccCCcEEEEEEeecCCCCcchHHHHHHHhhCCC---cEEEEc
Q 003952 621 YIETYKKYTHQGSRVLALAFKSLPDMTVSDARSLHRDEVENGLTFAGFAVFNCPIREDSAKILSELKNSSQ---DLAMIT 697 (784)
Q Consensus 621 ~~~~~~~~~~~G~Rvlala~k~l~~~~~~~~~~~~r~~~E~~l~flG~l~~~d~lr~da~~~I~~L~~agi---~v~MIT 697 (784)
..+.+.++...|.+++.++- +... | +..=..-+|+=.+.--.||-.+..=+.|++.++ +|+||
T Consensus 51 ~~~W~~e~k~~gi~v~vvSN-----n~e~------R--V~~~~~~l~v~fi~~A~KP~~~~fr~Al~~m~l~~~~vvmV- 116 (175)
T COG2179 51 LRAWLAELKEAGIKVVVVSN-----NKES------R--VARAAEKLGVPFIYRAKKPFGRAFRRALKEMNLPPEEVVMV- 116 (175)
T ss_pred HHHHHHHHHhcCCEEEEEeC-----CCHH------H--HHhhhhhcCCceeecccCccHHHHHHHHHHcCCChhHEEEE-
Confidence 34667788999999999872 1111 1 111111233333344557777777777777777 57776
Q ss_pred CCCHHHHHHHHHHcccc
Q 003952 698 GDQALTACYVASQVHIV 714 (784)
Q Consensus 698 GDn~~TA~~VA~~~gI~ 714 (784)
||...|=+--|...|+-
T Consensus 117 GDqL~TDVlggnr~G~~ 133 (175)
T COG2179 117 GDQLFTDVLGGNRAGMR 133 (175)
T ss_pred cchhhhhhhcccccCcE
Confidence 99999999999999985
No 127
>TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain. This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3.
Probab=56.05 E-value=16 Score=34.76 Aligned_cols=41 Identities=12% Similarity=0.195 Sum_probs=33.4
Q ss_pred CCCcchHHHHHHHhhCCCcEEEEcCCCH---------------HHHHHHHHHcccc
Q 003952 674 PIREDSAKILSELKNSSQDLAMITGDQA---------------LTACYVASQVHIV 714 (784)
Q Consensus 674 ~lr~da~~~I~~L~~agi~v~MITGDn~---------------~TA~~VA~~~gI~ 714 (784)
++.|++.++++.|++.|+++.++|..+. ..+..+.+.+|+.
T Consensus 27 ~~~~g~~~~l~~Lk~~g~~~~I~Sn~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~ 82 (147)
T TIGR01656 27 QLRPGAVPALLTLRAAGYTVVVVTNQSGIGRGYFSAEAFRAPNGRVLELLRQLGVA 82 (147)
T ss_pred EEcCChHHHHHHHHHCCCEEEEEeCCCcccCCcCCHHHHHHHHHHHHHHHHhCCCc
Confidence 5789999999999999999999998662 3445566778874
No 128
>PRK11587 putative phosphatase; Provisional
Probab=52.98 E-value=19 Score=36.66 Aligned_cols=41 Identities=12% Similarity=0.095 Sum_probs=35.1
Q ss_pred CCCcchHHHHHHHhhCCCcEEEEcCCCHHHHHHHHHHcccc
Q 003952 674 PIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIV 714 (784)
Q Consensus 674 ~lr~da~~~I~~L~~agi~v~MITGDn~~TA~~VA~~~gI~ 714 (784)
++.|++.++++.|++.|+++.++|+.+...+...-+..|+.
T Consensus 83 ~~~pg~~e~L~~L~~~g~~~~ivTn~~~~~~~~~l~~~~l~ 123 (218)
T PRK11587 83 TALPGAIALLNHLNKLGIPWAIVTSGSVPVASARHKAAGLP 123 (218)
T ss_pred eeCcCHHHHHHHHHHcCCcEEEEcCCCchHHHHHHHhcCCC
Confidence 57899999999999999999999998877666666677763
No 129
>PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional
Probab=52.92 E-value=18 Score=35.95 Aligned_cols=34 Identities=21% Similarity=0.149 Sum_probs=32.4
Q ss_pred HHHHHHhhCCCcEEEEcCCCHHHHHHHHHHcccc
Q 003952 681 KILSELKNSSQDLAMITGDQALTACYVASQVHIV 714 (784)
Q Consensus 681 ~~I~~L~~agi~v~MITGDn~~TA~~VA~~~gI~ 714 (784)
.+|+.|++.|+++.++||.....+..+++++|+.
T Consensus 55 ~~i~~L~~~Gi~v~I~T~~~~~~v~~~l~~lgl~ 88 (183)
T PRK09484 55 YGIRCLLTSGIEVAIITGRKSKLVEDRMTTLGIT 88 (183)
T ss_pred HHHHHHHHCCCEEEEEeCCCcHHHHHHHHHcCCc
Confidence 6999999999999999999999999999999985
No 130
>TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC. No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC.
Probab=52.37 E-value=16 Score=33.89 Aligned_cols=39 Identities=15% Similarity=0.069 Sum_probs=34.6
Q ss_pred CCCcchHHHHHHHhhCCCcEEEEcCC-CHHHHHHHHHHcc
Q 003952 674 PIREDSAKILSELKNSSQDLAMITGD-QALTACYVASQVH 712 (784)
Q Consensus 674 ~lr~da~~~I~~L~~agi~v~MITGD-n~~TA~~VA~~~g 712 (784)
++.+++.++++.|++.|+++.++|+- .+..+..+-+..|
T Consensus 29 ~~~~gv~e~L~~Lk~~g~~l~i~Sn~~~~~~~~~~l~~~~ 68 (128)
T TIGR01681 29 VTIKEIRDKLQTLKKNGFLLALASYNDDPHVAYELLKIFE 68 (128)
T ss_pred HHHHHHHHHHHHHHHCCeEEEEEeCCCCHHHHHHHHHhcc
Confidence 68999999999999999999999999 6777777777777
No 131
>TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase. This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast.
Probab=51.88 E-value=5.2e+02 Score=31.88 Aligned_cols=106 Identities=13% Similarity=0.087 Sum_probs=55.8
Q ss_pred HHHHHHHHhhhhHHHHHHHhhhhcccchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHh-hh------hCCceEEE---
Q 003952 190 FQKLMKENCMEPFFVFQVFCVGLWCLDEYWYYSLFTLFMLFMFESTMAKSRLKTLTEIRR-VR------VDNQTIMV--- 259 (784)
Q Consensus 190 ~~~ll~~~~~~pf~vfqi~~~~lw~l~~y~~~~~~~l~~l~~~~~~~~~~~~~~~~~l~~-~~------~~~~~v~V--- 259 (784)
|++-|++-+.--+.+.-+.+.++.-+.+..... +++++...+.....++..+..++|++ +. .+.....|
T Consensus 30 ~~~~~~~~~~~lL~~aa~~s~~~~~~~~~~~i~-~~~~i~~~i~~~qe~~a~~~~~~L~~~~~~~~~V~Rdg~~~~I~~~ 108 (755)
T TIGR01647 30 FLGFFWNPLSWVMEAAAIIAIALENWVDFVIIL-GLLLLNATIGFIEENKAGNAVEALKQSLAPKARVLRDGKWQEIPAS 108 (755)
T ss_pred HHHHHhchHHHHHHHHHHHHHhhcchhhhhhhh-hhhHHHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEECCEEEEEEhh
Confidence 444444433333344444555554444444333 33334444445555555555555543 11 12222222
Q ss_pred -EEcCeEEEeecCCCCCCcEEEEcCCCCCCCCCCeecceeeEeeCe
Q 003952 260 -HRCGKWVKLAGTDLVPGDVVSIGRSSGQTGEDKSVPADMLILGGS 304 (784)
Q Consensus 260 -~R~g~~~~I~s~~LvpGDiV~i~~ge~d~~~~~~vPaD~ill~G~ 304 (784)
+.-|....+...|.+|-|.+.++.. ..-+|=-.|.|+
T Consensus 109 ~Lv~GDiV~l~~Gd~IPaDg~vi~g~--------~~~VDeS~LTGE 146 (755)
T TIGR01647 109 ELVPGDVVRLKIGDIVPADCRLFEGD--------YIQVDQAALTGE 146 (755)
T ss_pred hCcCCCEEEECCCCEEeceEEEEecC--------ceEEEcccccCC
Confidence 3458889999999999999999732 234455555554
No 132
>PLN02887 hydrolase family protein
Probab=49.98 E-value=18 Score=42.75 Aligned_cols=42 Identities=21% Similarity=0.256 Sum_probs=38.7
Q ss_pred CCCCcchHHHHHHHhhCCCcEEEEcCCCHHHHHHHHHHcccc
Q 003952 673 CPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIV 714 (784)
Q Consensus 673 d~lr~da~~~I~~L~~agi~v~MITGDn~~TA~~VA~~~gI~ 714 (784)
..+-+.++++|++|++.||++++.||-....+..+.+++|+.
T Consensus 324 ~~Is~~t~eAI~kl~ekGi~~vIATGR~~~~i~~~l~~L~l~ 365 (580)
T PLN02887 324 SQISETNAKALKEALSRGVKVVIATGKARPAVIDILKMVDLA 365 (580)
T ss_pred CccCHHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhCcc
Confidence 358899999999999999999999999999999999999864
No 133
>PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=49.87 E-value=26 Score=37.62 Aligned_cols=42 Identities=12% Similarity=0.063 Sum_probs=38.2
Q ss_pred CCCCcchHHHHHHHhhCCCcEEEEcCCCHHHHHHHHHHcccc
Q 003952 673 CPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIV 714 (784)
Q Consensus 673 d~lr~da~~~I~~L~~agi~v~MITGDn~~TA~~VA~~~gI~ 714 (784)
+..-+.++++|+.|++.||.+++.||=.......+.+++|+.
T Consensus 17 ~~~~~~a~~aL~~Lk~~GI~vVlaTGRt~~ev~~l~~~Lgl~ 58 (302)
T PRK12702 17 FNSYGAARQALAALERRSIPLVLYSLRTRAQLEHLCRQLRLE 58 (302)
T ss_pred CcCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHhCCC
Confidence 345677999999999999999999999999999999999985
No 134
>PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional
Probab=47.91 E-value=47 Score=36.74 Aligned_cols=42 Identities=14% Similarity=0.110 Sum_probs=33.7
Q ss_pred CCCCcchHHHHHHHhhCCCcEEEEcCC---------------CHHHHHHHHHHcccc
Q 003952 673 CPIREDSAKILSELKNSSQDLAMITGD---------------QALTACYVASQVHIV 714 (784)
Q Consensus 673 d~lr~da~~~I~~L~~agi~v~MITGD---------------n~~TA~~VA~~~gI~ 714 (784)
.++.|++.+++++|++.|+++.++|.= ....+..+.+..|+.
T Consensus 29 ~~l~pGV~e~L~~Lk~~G~kL~IvTNq~g~G~~~~~~~~l~~~~~~i~~iL~~~gl~ 85 (354)
T PRK05446 29 LAFEPGVIPALLKLQKAGYKLVMVTNQDGLGTDSFPQEDFDPPHNLMMQIFESQGIK 85 (354)
T ss_pred ceECcCHHHHHHHHHhCCCeEEEEECCccccCccccHHHHhhHHHHHHHHHHHcCCc
Confidence 578999999999999999999999982 133456677777773
No 135
>PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B.
Probab=47.29 E-value=9.1 Score=37.67 Aligned_cols=13 Identities=54% Similarity=0.733 Sum_probs=12.2
Q ss_pred EEecccCcccCCc
Q 003952 487 CCFDKTGTLTSDD 499 (784)
Q Consensus 487 icfDKTGTLT~~~ 499 (784)
+|||.+||||.++
T Consensus 1 v~fD~DGTL~~~~ 13 (192)
T PF12710_consen 1 VIFDFDGTLTDSD 13 (192)
T ss_dssp EEEESBTTTBSSH
T ss_pred eEEecCcCeecCC
Confidence 6999999999988
No 136
>COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only]
Probab=46.80 E-value=74 Score=31.10 Aligned_cols=67 Identities=13% Similarity=0.166 Sum_probs=51.8
Q ss_pred HHHHhhccCeEEEEEEEeCCCCChhhHhhhhhhhccCCcEEEEEEeecCCCCcchHHHHHHHhhCCCcEEEEcCCCHHHH
Q 003952 625 YKKYTHQGSRVLALAFKSLPDMTVSDARSLHRDEVENGLTFAGFAVFNCPIREDSAKILSELKNSSQDLAMITGDQALTA 704 (784)
Q Consensus 625 ~~~~~~~G~Rvlala~k~l~~~~~~~~~~~~r~~~E~~l~flG~l~~~d~lr~da~~~I~~L~~agi~v~MITGDn~~TA 704 (784)
.+.+.++|.|.+.+- -|.+++..= ....-|+.++-+.+++++|+++.++|--++.-+
T Consensus 20 ~~~L~~~Gikgvi~D---------------------lDNTLv~wd--~~~~tpe~~~W~~e~k~~gi~v~vvSNn~e~RV 76 (175)
T COG2179 20 PDILKAHGIKGVILD---------------------LDNTLVPWD--NPDATPELRAWLAELKEAGIKVVVVSNNKESRV 76 (175)
T ss_pred HHHHHHcCCcEEEEe---------------------ccCceeccc--CCCCCHHHHHHHHHHHhcCCEEEEEeCCCHHHH
Confidence 456788999988774 123333321 224568888999999999999999999999999
Q ss_pred HHHHHHcccc
Q 003952 705 CYVASQVHIV 714 (784)
Q Consensus 705 ~~VA~~~gI~ 714 (784)
..+|..+|+.
T Consensus 77 ~~~~~~l~v~ 86 (175)
T COG2179 77 ARAAEKLGVP 86 (175)
T ss_pred HhhhhhcCCc
Confidence 9999999985
No 137
>TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family. This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association.
Probab=45.56 E-value=35 Score=36.27 Aligned_cols=56 Identities=7% Similarity=0.122 Sum_probs=38.7
Q ss_pred EEEeecCCCCcchHHHHHHHhhCCCcEEEEcCCCHHHHHH---HHHHcccccCCcEEEe
Q 003952 667 GFAVFNCPIREDSAKILSELKNSSQDLAMITGDQALTACY---VASQVHIVTKPVLILC 722 (784)
Q Consensus 667 G~l~~~d~lr~da~~~I~~L~~agi~v~MITGDn~~TA~~---VA~~~gI~~~~~~il~ 722 (784)
|.+.-.+.+=|++.++|+.|++.|++++.+||....+... --+++|+......+++
T Consensus 11 Gtl~~~~~~~~ga~e~l~~L~~~g~~~~~~Tnns~~~~~~~~~~l~~~G~~~~~~~i~t 69 (279)
T TIGR01452 11 GVLWLGERVVPGAPELLDRLARAGKAALFVTNNSTKSRAEYALKFARLGFNGLAEQLFS 69 (279)
T ss_pred CceEcCCeeCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCCChhhEec
Confidence 3344456667889999999999999999999965443333 3356788644444443
No 138
>cd02071 MM_CoA_mut_B12_BD methylmalonyl CoA mutase B12 binding domain. This domain binds to B12 (adenosylcobamide), which initiates the conversion of succinyl CoA and methylmalonyl CoA by forming an adenosyl radical, which then undergoes a rearrangement exchanging a hydrogen atom with a group attached to a neighboring carbon atom. This family is present in both mammals and bacteria. Bacterial members are heterodimers and involved in the fermentation of pyruvate to propionate. Mammalian members are homodimers and responsible for the conversion of odd-chain fatty acids and branched-chain amino acids via propionyl CoA to succinyl CoA for further degradation.
Probab=44.78 E-value=49 Score=30.41 Aligned_cols=82 Identities=9% Similarity=0.141 Sum_probs=55.6
Q ss_pred HHHhhccCeEEEEEEEeCCCCChhhHhhhhhhhccCCcEEEEEEeecCCCCcchHHHHHHHhhCCC-cE-EEEcCCCHHH
Q 003952 626 KKYTHQGSRVLALAFKSLPDMTVSDARSLHRDEVENGLTFAGFAVFNCPIREDSAKILSELKNSSQ-DL-AMITGDQALT 703 (784)
Q Consensus 626 ~~~~~~G~Rvlala~k~l~~~~~~~~~~~~r~~~E~~l~flG~l~~~d~lr~da~~~I~~L~~agi-~v-~MITGDn~~T 703 (784)
.-+...|++|+.++-. . ..+ +.-+...+.+-.++++-.......+.+++.++.|++.|. ++ +|+=|-.+.-
T Consensus 21 ~~l~~~G~~vi~lG~~-v---p~e---~~~~~a~~~~~d~V~iS~~~~~~~~~~~~~~~~L~~~~~~~i~i~~GG~~~~~ 93 (122)
T cd02071 21 RALRDAGFEVIYTGLR-Q---TPE---EIVEAAIQEDVDVIGLSSLSGGHMTLFPEVIELLRELGAGDILVVGGGIIPPE 93 (122)
T ss_pred HHHHHCCCEEEECCCC-C---CHH---HHHHHHHHcCCCEEEEcccchhhHHHHHHHHHHHHhcCCCCCEEEEECCCCHH
Confidence 3467899999998842 1 111 222333356667788877788889999999999999977 44 5566655433
Q ss_pred HHHHHHHcccc
Q 003952 704 ACYVASQVHIV 714 (784)
Q Consensus 704 A~~VA~~~gI~ 714 (784)
-..-.++.|+.
T Consensus 94 ~~~~~~~~G~d 104 (122)
T cd02071 94 DYELLKEMGVA 104 (122)
T ss_pred HHHHHHHCCCC
Confidence 35556689964
No 139
>TIGR01689 EcbF-BcbF capsule biosynthesis phosphatase. Due to the likelihood that the substrates of these enzymes are different depending on the nature of the particular polysaccharides associated with each species, this model has been classified as a subfamily despite the close homology.
Probab=44.64 E-value=20 Score=33.36 Aligned_cols=33 Identities=9% Similarity=-0.045 Sum_probs=28.3
Q ss_pred CCCCcchHHHHHHHhhCCCcEEEEcCCCHHHHH
Q 003952 673 CPIREDSAKILSELKNSSQDLAMITGDQALTAC 705 (784)
Q Consensus 673 d~lr~da~~~I~~L~~agi~v~MITGDn~~TA~ 705 (784)
+++.+++.+++++|++.|+.++.+||=......
T Consensus 23 ~~~~~~~ie~L~~l~~~G~~IiiaTGR~~~~~~ 55 (126)
T TIGR01689 23 VAPILAVIEKLRHYKALGFEIVISSSRNMRTYE 55 (126)
T ss_pred cccCHHHHHHHHHHHHCCCEEEEECCCCchhhh
Confidence 567889999999999999999999998765543
No 140
>COG4359 Uncharacterized conserved protein [Function unknown]
Probab=40.98 E-value=1e+02 Score=30.69 Aligned_cols=38 Identities=5% Similarity=0.033 Sum_probs=28.8
Q ss_pred CCCcchHHHHHHHhhCCCcEEEEcCCCHHHHHHHHHHc
Q 003952 674 PIREDSAKILSELKNSSQDLAMITGDQALTACYVASQV 711 (784)
Q Consensus 674 ~lr~da~~~I~~L~~agi~v~MITGDn~~TA~~VA~~~ 711 (784)
.++|+-++.++.+++.+++++++||--.---..+=...
T Consensus 73 ~Idp~fKef~e~ike~di~fiVvSsGm~~fI~~lfe~i 110 (220)
T COG4359 73 KIDPGFKEFVEWIKEHDIPFIVVSSGMDPFIYPLFEGI 110 (220)
T ss_pred ccCccHHHHHHHHHHcCCCEEEEeCCCchHHHHHHHhh
Confidence 56899999999999999999998875444444444433
No 141
>cd04728 ThiG Thiazole synthase (ThiG) is the tetrameric enzyme that is involved in the formation of the thiazole moiety of thiamin pyrophosphate, an essential ubiquitous cofactor that plays an important role in carbohydrate and amino acid metabolism. ThiG catalyzes the formation of thiazole from 1-deoxy-D-xylulose 5-phosphate (DXP) and dehydroglycine, with the help of the sulfur carrier protein ThiS that carries the sulfur needed for thiazole assembly on its carboxy terminus (ThiS-COSH).
Probab=40.97 E-value=2.3e+02 Score=29.65 Aligned_cols=90 Identities=9% Similarity=0.017 Sum_probs=66.2
Q ss_pred HHHHHHHHhhccCeEEEEEEEeCCC--CChhh---------------------------HhhhhhhhccCCcEEEEEEee
Q 003952 621 YIETYKKYTHQGSRVLALAFKSLPD--MTVSD---------------------------ARSLHRDEVENGLTFAGFAVF 671 (784)
Q Consensus 621 ~~~~~~~~~~~G~Rvlala~k~l~~--~~~~~---------------------------~~~~~r~~~E~~l~flG~l~~ 671 (784)
.+...+.+...|..++.+|.|..+. ...+. ...+.|+-...|+.=+=.+.=
T Consensus 22 ~~~~~~ai~aSg~~ivTva~rR~~~~~~~~~~~~~~i~~~~~~~lpNTaG~~ta~eAv~~a~lare~~~~~~iKlEVi~d 101 (248)
T cd04728 22 PAIMKEAIEASGAEIVTVALRRVNIGDPGGESFLDLLDKSGYTLLPNTAGCRTAEEAVRTARLAREALGTDWIKLEVIGD 101 (248)
T ss_pred HHHHHHHHHHhCCCEEEEEEEecccCCCCcchHHhhccccCCEECCCCCCCCCHHHHHHHHHHHHHHhCCCeEEEEEecC
Confidence 3344556677888899999887752 11111 122456666777776776666
Q ss_pred cCCCCcchHHHHHHHhhC---CCcEEEEcCCCHHHHHHHHHH
Q 003952 672 NCPIREDSAKILSELKNS---SQDLAMITGDQALTACYVASQ 710 (784)
Q Consensus 672 ~d~lr~da~~~I~~L~~a---gi~v~MITGDn~~TA~~VA~~ 710 (784)
..-|-||..++|+..++. |..|+=.+-|++.+|.+++.-
T Consensus 102 ~~~Llpd~~~tv~aa~~L~~~Gf~vlpyc~dd~~~ar~l~~~ 143 (248)
T cd04728 102 DKTLLPDPIETLKAAEILVKEGFTVLPYCTDDPVLAKRLEDA 143 (248)
T ss_pred ccccccCHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHc
Confidence 777899999999999998 999997888999999988876
No 142
>PRK11507 ribosome-associated protein; Provisional
Probab=40.85 E-value=32 Score=28.53 Aligned_cols=25 Identities=24% Similarity=0.230 Sum_probs=22.5
Q ss_pred EEEEcCeEEEeecCCCCCCcEEEEc
Q 003952 258 MVHRCGKWVKLAGTDLVPGDVVSIG 282 (784)
Q Consensus 258 ~V~R~g~~~~I~s~~LvpGDiV~i~ 282 (784)
.|..||+...-.-..|.|||+|.+.
T Consensus 38 ~V~VNGeve~rRgkKl~~GD~V~~~ 62 (70)
T PRK11507 38 QVKVDGAVETRKRCKIVAGQTVSFA 62 (70)
T ss_pred ceEECCEEecccCCCCCCCCEEEEC
Confidence 4777999999999999999999996
No 143
>TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED. HAD subfamilies caused by an overly broad single model.
Probab=40.54 E-value=1.8e+02 Score=27.99 Aligned_cols=87 Identities=11% Similarity=0.069 Sum_probs=47.5
Q ss_pred hhHHHHHHHHhhccCeEEEEEEEeCCCCChhhHhhhhhhhccCCcEEEEEEeecC--CCCcchHHHHHHHhhCCC---cE
Q 003952 619 SSYIETYKKYTHQGSRVLALAFKSLPDMTVSDARSLHRDEVENGLTFAGFAVFNC--PIREDSAKILSELKNSSQ---DL 693 (784)
Q Consensus 619 ~~~~~~~~~~~~~G~Rvlala~k~l~~~~~~~~~~~~r~~~E~~l~flG~l~~~d--~lr~da~~~I~~L~~agi---~v 693 (784)
+...+.++.+.++|+++..+.-... .......+..++. .|-..+.-++ .-||+..-....+++.|+ ++
T Consensus 88 ~g~~~~l~~l~~~g~~~~i~Tn~~~-----~~~~~~~~~~l~~--~f~~i~~~~~~~~~KP~~~~~~~~~~~~~~~~~~~ 160 (183)
T TIGR01509 88 PGVEPLLEALRARGKKLALLTNSPR-----DHAVLVQELGLRD--LFDVVIFSGDVGRGKPDPDIYLLALKKLGLKPEEC 160 (183)
T ss_pred cCHHHHHHHHHHCCCeEEEEeCCch-----HHHHHHHhcCCHH--HCCEEEEcCCCCCCCCCHHHHHHHHHHcCCCcceE
Confidence 4455667778888998876652211 1100011111111 1333332211 246655555555666666 46
Q ss_pred EEEcCCCHHHHHHHHHHcccc
Q 003952 694 AMITGDQALTACYVASQVHIV 714 (784)
Q Consensus 694 ~MITGDn~~TA~~VA~~~gI~ 714 (784)
+|+ ||++ .-+.-|+++|+.
T Consensus 161 ~~v-gD~~-~di~aA~~~G~~ 179 (183)
T TIGR01509 161 LFV-DDSP-AGIEAAKAAGMH 179 (183)
T ss_pred EEE-cCCH-HHHHHHHHcCCE
Confidence 776 9998 578899999984
No 144
>smart00577 CPDc catalytic domain of ctd-like phosphatases.
Probab=40.06 E-value=36 Score=32.36 Aligned_cols=88 Identities=16% Similarity=0.022 Sum_probs=57.1
Q ss_pred ecCCCCcchHHHHHHHhhCCCcEEEEcCCCHHHHHHHHHHcccccC-CcEEEecCCCCCeeEEeCCCcccccccchhhhh
Q 003952 671 FNCPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTK-PVLILCPVKNGKVYEWVSPDETEKIQYSEKEVE 749 (784)
Q Consensus 671 ~~d~lr~da~~~I~~L~~agi~v~MITGDn~~TA~~VA~~~gI~~~-~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 749 (784)
+.-++||++.+.++.|+ .++++.+.|.=+...|..+-+.+|+... ...++..++... ... . + ...++
T Consensus 42 ~~v~l~pG~~e~L~~L~-~~~~l~I~Ts~~~~~~~~il~~l~~~~~~f~~i~~~~d~~~---~KP-----~--~-~k~l~ 109 (148)
T smart00577 42 VYVKKRPGVDEFLKRAS-ELFELVVFTAGLRMYADPVLDLLDPKKYFGYRRLFRDECVF---VKG-----K--Y-VKDLS 109 (148)
T ss_pred EEEEECCCHHHHHHHHH-hccEEEEEeCCcHHHHHHHHHHhCcCCCEeeeEEECccccc---cCC-----e--E-eecHH
Confidence 44467999999999999 5799999999999999999999988532 133343221000 000 0 0 00112
Q ss_pred ccC-CCeeEEEechhHHHHhcC
Q 003952 750 GLT-DAHDLCIGGDCFEMLQQT 770 (784)
Q Consensus 750 ~l~-~~~~l~~tGd~l~~l~~~ 770 (784)
.+. .....+|.||....+...
T Consensus 110 ~l~~~p~~~i~i~Ds~~~~~aa 131 (148)
T smart00577 110 LLGRDLSNVIIIDDSPDSWPFH 131 (148)
T ss_pred HcCCChhcEEEEECCHHHhhcC
Confidence 222 234588999999888765
No 145
>TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase. These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA.
Probab=39.61 E-value=32 Score=34.56 Aligned_cols=43 Identities=16% Similarity=0.103 Sum_probs=31.7
Q ss_pred CCCCcchHHHHHHHhhCCCcEEEEcCCCHHH--HHHHHHHccccc
Q 003952 673 CPIREDSAKILSELKNSSQDLAMITGDQALT--ACYVASQVHIVT 715 (784)
Q Consensus 673 d~lr~da~~~I~~L~~agi~v~MITGDn~~T--A~~VA~~~gI~~ 715 (784)
.++.|++.++++.|++.|+++.++|...... +.......++.+
T Consensus 93 ~~~~~~~~~~L~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~l~~ 137 (211)
T TIGR02247 93 TKLRPSMMAAIKTLRAKGFKTACITNNFPTDHSAEEALLPGDIMA 137 (211)
T ss_pred cccChhHHHHHHHHHHCCCeEEEEeCCCCccchhhhHhhhhhhHh
Confidence 4678999999999999999999999876543 333333345543
No 146
>TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases.
Probab=39.43 E-value=48 Score=33.42 Aligned_cols=48 Identities=10% Similarity=0.035 Sum_probs=41.2
Q ss_pred CCCCcchHHHHHHHhhCCCcEEEEcCCCHHHHHHHHHHcccccCCcEEE
Q 003952 673 CPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLIL 721 (784)
Q Consensus 673 d~lr~da~~~I~~L~~agi~v~MITGDn~~TA~~VA~~~gI~~~~~~il 721 (784)
.++.|++.++++.|++. +++.++|+-....+..+-++.|+......+.
T Consensus 96 ~~~~~g~~~~L~~l~~~-~~~~i~Sn~~~~~~~~~l~~~~l~~~fd~i~ 143 (224)
T TIGR02254 96 HQLLPGAFELMENLQQK-FRLYIVTNGVRETQYKRLRKSGLFPFFDDIF 143 (224)
T ss_pred CeeCccHHHHHHHHHhc-CcEEEEeCCchHHHHHHHHHCCcHhhcCEEE
Confidence 46789999999999999 9999999998999899999999975444444
No 147
>smart00775 LNS2 LNS2 domain. This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance.
Probab=39.26 E-value=27 Score=33.74 Aligned_cols=34 Identities=15% Similarity=0.110 Sum_probs=30.9
Q ss_pred cCCCCcchHHHHHHHhhCCCcEEEEcCCCHHHHH
Q 003952 672 NCPIREDSAKILSELKNSSQDLAMITGDQALTAC 705 (784)
Q Consensus 672 ~d~lr~da~~~I~~L~~agi~v~MITGDn~~TA~ 705 (784)
++.+.|+++++++.+++.|++++.+||=....+.
T Consensus 25 ~~~~~~~~~~a~~~l~~~G~~ivy~TGRp~~~~~ 58 (157)
T smart00775 25 KDWTHPGVAKLYRDIQNNGYKILYLTARPIGQAD 58 (157)
T ss_pred cCcCCHHHHHHHHHHHHcCCeEEEEcCCcHHHHH
Confidence 4677899999999999999999999999888774
No 148
>PTZ00174 phosphomannomutase; Provisional
Probab=39.24 E-value=42 Score=34.92 Aligned_cols=35 Identities=17% Similarity=0.270 Sum_probs=30.0
Q ss_pred CCCcchHHHHHHHhhCCCcEEEEcCCCHHHHHHHH
Q 003952 674 PIREDSAKILSELKNSSQDLAMITGDQALTACYVA 708 (784)
Q Consensus 674 ~lr~da~~~I~~L~~agi~v~MITGDn~~TA~~VA 708 (784)
++-+.++++|+++++.||++++.||-.........
T Consensus 22 ~is~~~~~ai~~l~~~Gi~~viaTGR~~~~i~~~l 56 (247)
T PTZ00174 22 PITQEMKDTLAKLKSKGFKIGVVGGSDYPKIKEQL 56 (247)
T ss_pred CCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHH
Confidence 57889999999999999999999998887554443
No 149
>PTZ00445 p36-lilke protein; Provisional
Probab=38.75 E-value=45 Score=33.98 Aligned_cols=29 Identities=21% Similarity=0.208 Sum_probs=24.9
Q ss_pred CCCcchHHHHHHHhhCCCcEEEEcCCCHH
Q 003952 674 PIREDSAKILSELKNSSQDLAMITGDQAL 702 (784)
Q Consensus 674 ~lr~da~~~I~~L~~agi~v~MITGDn~~ 702 (784)
.++|+.+.-+++|+++||++.++|=-...
T Consensus 75 ~~tpefk~~~~~l~~~~I~v~VVTfSd~~ 103 (219)
T PTZ00445 75 SVTPDFKILGKRLKNSNIKISVVTFSDKE 103 (219)
T ss_pred cCCHHHHHHHHHHHHCCCeEEEEEccchh
Confidence 47999999999999999999999954443
No 150
>cd02067 B12-binding B12 binding domain (B12-BD). This domain binds different cobalamid derivates, like B12 (adenosylcobamide) or methylcobalamin or methyl-Co(III) 5-hydroxybenzimidazolylcobamide, it is found in several enzymes, such as glutamate mutase, methionine synthase and methylmalonyl-CoA mutase. Cobalamin undergoes a conformational change on binding the protein; the dimethylbenzimidazole group, which is coordinated to the cobalt in the free cofactor, moves away from the corrin and is replaced by a histidine contributed by the protein. The sequence Asp-X-His-X-X-Gly, which contains this histidine ligand, is conserved in many cobalamin-binding proteins.
Probab=38.59 E-value=72 Score=28.88 Aligned_cols=82 Identities=13% Similarity=0.231 Sum_probs=56.1
Q ss_pred HHHhhccCeEEEEEEEeCCCCChhhHhhhhhhhccCCcEEEEEEeecCCCCcchHHHHHHHhhCCC-cE-EEEcCCCHHH
Q 003952 626 KKYTHQGSRVLALAFKSLPDMTVSDARSLHRDEVENGLTFAGFAVFNCPIREDSAKILSELKNSSQ-DL-AMITGDQALT 703 (784)
Q Consensus 626 ~~~~~~G~Rvlala~k~l~~~~~~~~~~~~r~~~E~~l~flG~l~~~d~lr~da~~~I~~L~~agi-~v-~MITGDn~~T 703 (784)
..+...|++|+.++.. ++ .++ +-..-.+.+-.++|+-....+--+.+++.++.+|+.+- ++ +|+-|-....
T Consensus 21 ~~l~~~G~~V~~lg~~-~~---~~~---l~~~~~~~~pdvV~iS~~~~~~~~~~~~~i~~l~~~~~~~~~i~vGG~~~~~ 93 (119)
T cd02067 21 RALRDAGFEVIDLGVD-VP---PEE---IVEAAKEEDADAIGLSGLLTTHMTLMKEVIEELKEAGLDDIPVLVGGAIVTR 93 (119)
T ss_pred HHHHHCCCEEEECCCC-CC---HHH---HHHHHHHcCCCEEEEeccccccHHHHHHHHHHHHHcCCCCCeEEEECCCCCh
Confidence 3466799999887722 22 222 22223346667888888777777999999999999986 44 6777755444
Q ss_pred HHHHHHHcccc
Q 003952 704 ACYVASQVHIV 714 (784)
Q Consensus 704 A~~VA~~~gI~ 714 (784)
.-..+++.|..
T Consensus 94 ~~~~~~~~G~D 104 (119)
T cd02067 94 DFKFLKEIGVD 104 (119)
T ss_pred hHHHHHHcCCe
Confidence 35678888864
No 151
>TIGR01691 enolase-ppase 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. This enzyme is the enolase-phosphatase of methionine salvage, a pathway that regenerates methionine from methylthioadenosine (MTA). Adenosylmethionine (AdoMet) is a donor of different moieties for various processes, including methylation reactions. Use of AdoMet for spermidine biosynthesis, which leads to polyamine biosynthesis, leaves MTA as a by-product that must be cleared. In Bacillus subtilis and related species, this single protein is replaced by separate enzymes with enolase and phosphatase activities.
Probab=36.84 E-value=56 Score=33.57 Aligned_cols=41 Identities=10% Similarity=0.068 Sum_probs=34.9
Q ss_pred ecCCCCcchHHHHHHHhhCCCcEEEEcCCCHHHHHHHHHHc
Q 003952 671 FNCPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQV 711 (784)
Q Consensus 671 ~~d~lr~da~~~I~~L~~agi~v~MITGDn~~TA~~VA~~~ 711 (784)
++.++.||+.++++.|+++|+++.++|..+......+-+..
T Consensus 92 ~~~~lypgv~e~L~~Lk~~G~~l~I~Sn~s~~~~~~~~~~~ 132 (220)
T TIGR01691 92 LTSHLYPDVPPALEAWLQLGLRLAVYSSGSVPAQKLLFGHS 132 (220)
T ss_pred cccCcCcCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHhhc
Confidence 45689999999999999999999999998877766665554
No 152
>PRK09449 dUMP phosphatase; Provisional
Probab=36.75 E-value=50 Score=33.45 Aligned_cols=47 Identities=11% Similarity=0.087 Sum_probs=38.8
Q ss_pred CCCcchHHHHHHHhhCCCcEEEEcCCCHHHHHHHHHHcccccCCcEEE
Q 003952 674 PIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLIL 721 (784)
Q Consensus 674 ~lr~da~~~I~~L~~agi~v~MITGDn~~TA~~VA~~~gI~~~~~~il 721 (784)
++.|++.++++.|+ .|+++.++|......+...-++.|+......+.
T Consensus 95 ~~~~g~~~~L~~L~-~~~~~~i~Tn~~~~~~~~~l~~~~l~~~fd~v~ 141 (224)
T PRK09449 95 TPLPGAVELLNALR-GKVKMGIITNGFTELQQVRLERTGLRDYFDLLV 141 (224)
T ss_pred ccCccHHHHHHHHH-hCCeEEEEeCCcHHHHHHHHHhCChHHHcCEEE
Confidence 57899999999999 689999999988888888888899875433333
No 153
>PRK09456 ?-D-glucose-1-phosphatase; Provisional
Probab=36.56 E-value=2.5e+02 Score=27.83 Aligned_cols=89 Identities=18% Similarity=0.140 Sum_probs=51.2
Q ss_pred CchhHHHHHHHHhhccCeEEEEEEEeCCCCChhhHhhh--hhhhccCCcEEEEEEeecC--CCCcchHHHHHHHhhCCC-
Q 003952 617 LPSSYIETYKKYTHQGSRVLALAFKSLPDMTVSDARSL--HRDEVENGLTFAGFAVFNC--PIREDSAKILSELKNSSQ- 691 (784)
Q Consensus 617 ~p~~~~~~~~~~~~~G~Rvlala~k~l~~~~~~~~~~~--~r~~~E~~l~flG~l~~~d--~lr~da~~~I~~L~~agi- 691 (784)
..+...+.++.+.++|+++..++-..- ...... .+..+.. -|-.++.-.+ .-||+..-....+++.|+
T Consensus 85 ~~~g~~e~L~~l~~~g~~~~i~Sn~~~-----~~~~~~~~~~~~l~~--~fd~v~~s~~~~~~KP~p~~~~~~~~~~~~~ 157 (199)
T PRK09456 85 LRPEVIAIMHKLREQGHRVVVLSNTNR-----LHTTFWPEEYPEVRA--AADHIYLSQDLGMRKPEARIYQHVLQAEGFS 157 (199)
T ss_pred cCHHHHHHHHHHHhCCCcEEEEcCCch-----hhHHHHHhhchhHHH--hcCEEEEecccCCCCCCHHHHHHHHHHcCCC
Confidence 445677788889999999877763211 000000 0001111 1212222111 236776666666777787
Q ss_pred --cEEEEcCCCHHHHHHHHHHcccc
Q 003952 692 --DLAMITGDQALTACYVASQVHIV 714 (784)
Q Consensus 692 --~v~MITGDn~~TA~~VA~~~gI~ 714 (784)
+++|| ||++ +-+..|+++|+.
T Consensus 158 p~~~l~v-gD~~-~di~aA~~aG~~ 180 (199)
T PRK09456 158 AADAVFF-DDNA-DNIEAANALGIT 180 (199)
T ss_pred hhHeEEe-CCCH-HHHHHHHHcCCE
Confidence 46777 8987 469999999995
No 154
>COG0647 NagD Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism]
Probab=35.57 E-value=41 Score=35.67 Aligned_cols=45 Identities=18% Similarity=0.220 Sum_probs=39.6
Q ss_pred EEEeecCCCCcchHHHHHHHhhCCCcEEEEcCCCHHHHHHHHHHc
Q 003952 667 GFAVFNCPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQV 711 (784)
Q Consensus 667 G~l~~~d~lr~da~~~I~~L~~agi~v~MITGDn~~TA~~VA~~~ 711 (784)
|.+.--+.+=|++.++|+.|+++|++++.+|--...+...+++++
T Consensus 17 Gvl~~G~~~ipga~e~l~~L~~~g~~~iflTNn~~~s~~~~~~~L 61 (269)
T COG0647 17 GVLYRGNEAIPGAAEALKRLKAAGKPVIFLTNNSTRSREVVAARL 61 (269)
T ss_pred CceEeCCccCchHHHHHHHHHHcCCeEEEEeCCCCCCHHHHHHHH
Confidence 777788888999999999999999999999998888888666554
No 155
>TIGR02370 pyl_corrinoid methyltransferase cognate corrinoid proteins, Methanosarcina family. This model describes a subfamily of the B12 binding domain (pfam02607, pfam02310) proteins. Members of the seed alignment include corrinoid proteins specific to four different, mutally non-homologous enzymes of the genus Methanosarcina. Three of the four cognate enzymes (trimethylamine, dimethylamine, and monomethylamine methyltransferases) all have the unusual, ribosomally incorporated amino acid pyrrolysine at the active site. All act in systems in which a methyl group is transferred to the corrinoid protein to create methylcobalamin, from which the methyl group is later transferred elsewhere.
Probab=33.75 E-value=54 Score=32.99 Aligned_cols=80 Identities=13% Similarity=0.097 Sum_probs=55.9
Q ss_pred HHHhhccCeEEEEEEEeCCCCChhhHhhhhhhhccCCcEEEEEEeecCCCCcchHHHHHHHhhCCCc--E-EEEcCCCHH
Q 003952 626 KKYTHQGSRVLALAFKSLPDMTVSDARSLHRDEVENGLTFAGFAVFNCPIREDSAKILSELKNSSQD--L-AMITGDQAL 702 (784)
Q Consensus 626 ~~~~~~G~Rvlala~k~l~~~~~~~~~~~~r~~~E~~l~flG~l~~~d~lr~da~~~I~~L~~agi~--v-~MITGDn~~ 702 (784)
.-+...|++|+.++.. . ..++ +-..-.+.+-.++|+-+...+--++.++.|+.|++.|.+ + +|+-| .+.
T Consensus 106 ~~l~~~G~~vi~LG~~-v---p~e~---~v~~~~~~~pd~v~lS~~~~~~~~~~~~~i~~l~~~~~~~~v~i~vGG-~~~ 177 (197)
T TIGR02370 106 TMLRANGFDVIDLGRD-V---PIDT---VVEKVKKEKPLMLTGSALMTTTMYGQKDINDKLKEEGYRDSVKFMVGG-APV 177 (197)
T ss_pred HHHHhCCcEEEECCCC-C---CHHH---HHHHHHHcCCCEEEEccccccCHHHHHHHHHHHHHcCCCCCCEEEEEC-hhc
Confidence 3466789999998832 1 1222 222223466778888888888899999999999999875 4 56666 555
Q ss_pred HHHHHHHHcccc
Q 003952 703 TACYVASQVHIV 714 (784)
Q Consensus 703 TA~~VA~~~gI~ 714 (784)
+. ..|+++|-.
T Consensus 178 ~~-~~~~~~gad 188 (197)
T TIGR02370 178 TQ-DWADKIGAD 188 (197)
T ss_pred CH-HHHHHhCCc
Confidence 54 578888864
No 156
>TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.
Probab=33.53 E-value=67 Score=33.37 Aligned_cols=44 Identities=14% Similarity=0.086 Sum_probs=39.8
Q ss_pred cCCCCcchHHHHHHHhhCCCcEEEEcCCCHHHHHHHHHHccccc
Q 003952 672 NCPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVT 715 (784)
Q Consensus 672 ~d~lr~da~~~I~~L~~agi~v~MITGDn~~TA~~VA~~~gI~~ 715 (784)
..+..|...++|+++++.|+.++..||=.......+.++.++..
T Consensus 19 ~~~~~~~~~~~i~~~~~~gi~fv~aTGR~~~~~~~~~~~~~~~~ 62 (249)
T TIGR01485 19 DNQALLRLNALLEDHRGEDSLLVYSTGRSPHSYKELQKQKPLLT 62 (249)
T ss_pred ChHHHHHHHHHHHHhhccCceEEEEcCCCHHHHHHHHhcCCCCC
Confidence 34567899999999999999999999999999999999999764
No 157
>TIGR01664 DNA-3'-Pase DNA 3'-phosphatase. The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region.
Probab=33.36 E-value=59 Score=31.71 Aligned_cols=39 Identities=10% Similarity=0.193 Sum_probs=31.0
Q ss_pred CcchHHHHHHHhhCCCcEEEEcCCCHH------------HHHHHHHHcccc
Q 003952 676 REDSAKILSELKNSSQDLAMITGDQAL------------TACYVASQVHIV 714 (784)
Q Consensus 676 r~da~~~I~~L~~agi~v~MITGDn~~------------TA~~VA~~~gI~ 714 (784)
-|++.++++.|++.|+++.++|.-... .+..+-+..|+.
T Consensus 44 ~pgv~e~L~~Lk~~G~~l~I~TN~~~~~~~~~~~~~~~~~i~~~l~~~gl~ 94 (166)
T TIGR01664 44 YPEIPAKLQELDDEGYKIVIFTNQSGIGRGKLSAESFKNKIEAFLEKLKVP 94 (166)
T ss_pred cCCHHHHHHHHHHCCCEEEEEeCCcccccCcccHHHHHHHHHHHHHHcCCC
Confidence 489999999999999999999964431 345667788873
No 158
>TIGR01261 hisB_Nterm histidinol-phosphatase. This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis.
Probab=33.33 E-value=55 Score=31.75 Aligned_cols=41 Identities=15% Similarity=0.157 Sum_probs=33.0
Q ss_pred CCCcchHHHHHHHhhCCCcEEEEcCC---------------CHHHHHHHHHHcccc
Q 003952 674 PIREDSAKILSELKNSSQDLAMITGD---------------QALTACYVASQVHIV 714 (784)
Q Consensus 674 ~lr~da~~~I~~L~~agi~v~MITGD---------------n~~TA~~VA~~~gI~ 714 (784)
++-|++.++++.|++.|+++.++|-- ....+..+-++.|+.
T Consensus 29 ~~~pgv~e~L~~L~~~g~~l~IvSN~~g~~~~~~~~~~~~~~~~~~~~~l~~~gl~ 84 (161)
T TIGR01261 29 RFEKGVIPALLKLKKAGYKFVMVTNQDGLGTPSFPQADFDGPHNLMLQIFRSQGII 84 (161)
T ss_pred eECCCHHHHHHHHHHCCCeEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHCCCc
Confidence 46789999999999999999999974 234566677777874
No 159
>PRK02261 methylaspartate mutase subunit S; Provisional
Probab=33.24 E-value=1.3e+02 Score=28.42 Aligned_cols=81 Identities=11% Similarity=0.071 Sum_probs=56.3
Q ss_pred HHHhhccCeEEEEEEEeCCCCChhhHhhhhhhhccCCcEEEEEEeecCCCCcchHHHHHHHhhCCC-c-EEEEcCCC---
Q 003952 626 KKYTHQGSRVLALAFKSLPDMTVSDARSLHRDEVENGLTFAGFAVFNCPIREDSAKILSELKNSSQ-D-LAMITGDQ--- 700 (784)
Q Consensus 626 ~~~~~~G~Rvlala~k~l~~~~~~~~~~~~r~~~E~~l~flG~l~~~d~lr~da~~~I~~L~~agi-~-v~MITGDn--- 700 (784)
.-+..+|++|+.++... .. .++-+.-.+.+-.++|+-.+...-.+.+++.++.|++.+. . .+|+-|--
T Consensus 25 ~~lr~~G~eVi~LG~~v----p~---e~i~~~a~~~~~d~V~lS~~~~~~~~~~~~~~~~L~~~~~~~~~i~vGG~~~~~ 97 (137)
T PRK02261 25 RALTEAGFEVINLGVMT----SQ---EEFIDAAIETDADAILVSSLYGHGEIDCRGLREKCIEAGLGDILLYVGGNLVVG 97 (137)
T ss_pred HHHHHCCCEEEECCCCC----CH---HHHHHHHHHcCCCEEEEcCccccCHHHHHHHHHHHHhcCCCCCeEEEECCCCCC
Confidence 34668999999998432 11 2233344456777888888888999999999999999966 3 35666632
Q ss_pred ---HHHHHHHHHHccc
Q 003952 701 ---ALTACYVASQVHI 713 (784)
Q Consensus 701 ---~~TA~~VA~~~gI 713 (784)
+.-....++++|+
T Consensus 98 ~~~~~~~~~~l~~~G~ 113 (137)
T PRK02261 98 KHDFEEVEKKFKEMGF 113 (137)
T ss_pred ccChHHHHHHHHHcCC
Confidence 2334467888885
No 160
>TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase. These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA.
Probab=33.03 E-value=3e+02 Score=27.37 Aligned_cols=89 Identities=13% Similarity=0.140 Sum_probs=49.8
Q ss_pred hhHHHHHHHHhhccCeEEEEEEEeCCCCChhhHhhhhhhhccCCcEEEEEEeecC---CCCcchHHHHHHHhhCCC---c
Q 003952 619 SSYIETYKKYTHQGSRVLALAFKSLPDMTVSDARSLHRDEVENGLTFAGFAVFNC---PIREDSAKILSELKNSSQ---D 692 (784)
Q Consensus 619 ~~~~~~~~~~~~~G~Rvlala~k~l~~~~~~~~~~~~r~~~E~~l~flG~l~~~d---~lr~da~~~I~~L~~agi---~ 692 (784)
+...+.++.+.++|+++..+.-....... ......+..+..- |-..+ ..+ ..||+..-....+++.|+ +
T Consensus 97 ~~~~~~L~~L~~~g~~l~i~Sn~~~~~~~--~~~~~~~~~l~~~--fd~v~-~s~~~~~~KP~p~~~~~~~~~~g~~~~~ 171 (211)
T TIGR02247 97 PSMMAAIKTLRAKGFKTACITNNFPTDHS--AEEALLPGDIMAL--FDAVV-ESCLEGLRKPDPRIYQLMLERLGVAPEE 171 (211)
T ss_pred hhHHHHHHHHHHCCCeEEEEeCCCCccch--hhhHhhhhhhHhh--CCEEE-EeeecCCCCCCHHHHHHHHHHcCCCHHH
Confidence 44566778888899998777632111000 0000100011111 11222 222 247777666666777777 5
Q ss_pred EEEEcCCCHHHHHHHHHHcccc
Q 003952 693 LAMITGDQALTACYVASQVHIV 714 (784)
Q Consensus 693 v~MITGDn~~TA~~VA~~~gI~ 714 (784)
++|| ||. ..-+..|+++|+.
T Consensus 172 ~l~i-~D~-~~di~aA~~aG~~ 191 (211)
T TIGR02247 172 CVFL-DDL-GSNLKPAAALGIT 191 (211)
T ss_pred eEEE-cCC-HHHHHHHHHcCCE
Confidence 8999 876 5678899999984
No 161
>KOG4383 consensus Uncharacterized conserved protein [Function unknown]
Probab=32.18 E-value=22 Score=41.52 Aligned_cols=56 Identities=18% Similarity=0.283 Sum_probs=52.9
Q ss_pred ccCCcEEEEEEeecCCCCcchHHHHHHHhhCCCcEEEEcCCCHHHHHHHHHHcccc
Q 003952 659 VENGLTFAGFAVFNCPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIV 714 (784)
Q Consensus 659 ~E~~l~flG~l~~~d~lr~da~~~I~~L~~agi~v~MITGDn~~TA~~VA~~~gI~ 714 (784)
.-++-.|.|++..+-+.++|....|+.|-++.||.+--+-.+.+...-.|.++||-
T Consensus 811 a~sGQIf~GlVs~~Yea~ldiVriIdgL~naCiRfVYFS~EdELkSkVFAEKlGiE 866 (1354)
T KOG4383|consen 811 AFSGQIFCGLVSLHYEAILDIVRIIDGLDNACIRFVYFSKEDELKSKVFAEKLGIE 866 (1354)
T ss_pred HhccchhhhhhhhhccchhhHHHHHHHhhhhheeeeeecchHHHHHHHHHHHhccc
Confidence 34677899999999999999999999999999999999999999999999999996
No 162
>PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional
Probab=32.15 E-value=61 Score=38.85 Aligned_cols=40 Identities=13% Similarity=0.058 Sum_probs=36.4
Q ss_pred CCcchHHHHHHHhhCCCcEEEEcCCCHHHHHHHHHHcccc
Q 003952 675 IREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIV 714 (784)
Q Consensus 675 lr~da~~~I~~L~~agi~v~MITGDn~~TA~~VA~~~gI~ 714 (784)
.-+.+.++|+.|+++||.+++.||-...-+..+++++|+.
T Consensus 434 i~~~t~eAL~~L~ekGI~~VIATGRs~~~i~~l~~~Lgl~ 473 (694)
T PRK14502 434 SYSTALDALRLLKDKELPLVFCSAKTMGEQDLYRNELGIK 473 (694)
T ss_pred cCHHHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCCC
Confidence 4457899999999999999999999999999999999963
No 163
>TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB. The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear.
Probab=32.11 E-value=68 Score=31.96 Aligned_cols=39 Identities=13% Similarity=0.260 Sum_probs=35.6
Q ss_pred CCCcchHHHHHHHhhCCCcEEEEcCCCHHHHHHHHHHcc
Q 003952 674 PIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVH 712 (784)
Q Consensus 674 ~lr~da~~~I~~L~~agi~v~MITGDn~~TA~~VA~~~g 712 (784)
++-+++.++|++|++.|++++++||=....+....++++
T Consensus 17 ~~~~~~~~~l~~l~~~g~~~~i~TGR~~~~~~~~~~~~~ 55 (204)
T TIGR01484 17 ELSPETIEALERLREAGVKVVLVTGRSLAEIKELLKQLP 55 (204)
T ss_pred cCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHhCC
Confidence 467899999999999999999999999999999998854
No 164
>TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA. In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme.
Probab=31.64 E-value=2.7e+02 Score=25.38 Aligned_cols=91 Identities=15% Similarity=0.135 Sum_probs=49.1
Q ss_pred hhHHHHHHHHhhccCeEEEEEEEeCCCCC---hhhHhh-hhhhhccCCcEEEEEEeecCCCCcchHHHHHHHhhC-CC--
Q 003952 619 SSYIETYKKYTHQGSRVLALAFKSLPDMT---VSDARS-LHRDEVENGLTFAGFAVFNCPIREDSAKILSELKNS-SQ-- 691 (784)
Q Consensus 619 ~~~~~~~~~~~~~G~Rvlala~k~l~~~~---~~~~~~-~~r~~~E~~l~flG~l~~~d~lr~da~~~I~~L~~a-gi-- 691 (784)
++..+.++.+.++|+++..++-+...... ...... +.+- ++.+-.........||...-....+++. ++
T Consensus 28 ~~v~~~l~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~~l~~~----~l~~~~~~~~~~~~KP~~~~~~~~~~~~~~~~~ 103 (132)
T TIGR01662 28 PEVPDALAELKEAGYKVVIVTNQSGIGRGKFSSGRVARRLEEL----GVPIDVLYACPHCRKPKPGMFLEALKRFNEIDP 103 (132)
T ss_pred CCHHHHHHHHHHCCCEEEEEECCccccccHHHHHHHHHHHHHC----CCCEEEEEECCCCCCCChHHHHHHHHHcCCCCh
Confidence 44556777888899998888744311000 111111 1221 2222222211134466554444555555 35
Q ss_pred -cEEEEcCCCHHHHHHHHHHcccc
Q 003952 692 -DLAMITGDQALTACYVASQVHIV 714 (784)
Q Consensus 692 -~v~MITGDn~~TA~~VA~~~gI~ 714 (784)
+++| =||+..+-+..|+++|+.
T Consensus 104 ~~~v~-IGD~~~~Di~~A~~~Gi~ 126 (132)
T TIGR01662 104 EESVY-VGDQDLTDLQAAKRAGLA 126 (132)
T ss_pred hheEE-EcCCCcccHHHHHHCCCe
Confidence 3555 599878899999999985
No 165
>PRK00208 thiG thiazole synthase; Reviewed
Probab=31.44 E-value=4e+02 Score=27.91 Aligned_cols=90 Identities=9% Similarity=0.015 Sum_probs=65.8
Q ss_pred HHHHHHHHhhccCeEEEEEEEeCCCCC-hh------------------------h---HhhhhhhhccCCcEEEEEEeec
Q 003952 621 YIETYKKYTHQGSRVLALAFKSLPDMT-VS------------------------D---ARSLHRDEVENGLTFAGFAVFN 672 (784)
Q Consensus 621 ~~~~~~~~~~~G~Rvlala~k~l~~~~-~~------------------------~---~~~~~r~~~E~~l~flG~l~~~ 672 (784)
.+...+.+...|..++.+|.|..+... .+ + ...+-|+-...|+.=+=.+.=.
T Consensus 23 ~~~~~~ai~asg~~ivTvalrR~~~~~~~~~~~~~i~~~~~~~lpNTaG~~ta~eAv~~a~lare~~~~~~iKlEVi~d~ 102 (250)
T PRK00208 23 PQVMQEAIEASGAEIVTVALRRVNLGQGGDNLLDLLPPLGVTLLPNTAGCRTAEEAVRTARLAREALGTNWIKLEVIGDD 102 (250)
T ss_pred HHHHHHHHHHhCCCeEEEEEEeecCCCCcchHHhhccccCCEECCCCCCCCCHHHHHHHHHHHHHHhCCCeEEEEEecCC
Confidence 344455667788888888888765211 01 0 1235567777887777777767
Q ss_pred CCCCcchHHHHHHHhhC---CCcEEEEcCCCHHHHHHHHHH
Q 003952 673 CPIREDSAKILSELKNS---SQDLAMITGDQALTACYVASQ 710 (784)
Q Consensus 673 d~lr~da~~~I~~L~~a---gi~v~MITGDn~~TA~~VA~~ 710 (784)
+-+-||..++|+..++. |..|+=.+-|++.+|.+++.-
T Consensus 103 ~~llpd~~~tv~aa~~L~~~Gf~vlpyc~~d~~~ak~l~~~ 143 (250)
T PRK00208 103 KTLLPDPIETLKAAEILVKEGFVVLPYCTDDPVLAKRLEEA 143 (250)
T ss_pred CCCCcCHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHc
Confidence 77899999999999998 999987788888888888775
No 166
>PF03767 Acid_phosphat_B: HAD superfamily, subfamily IIIB (Acid phosphatase); InterPro: IPR005519 This family of class B acid phosphatases also contains a number of vegetative storage proteins (VPS25). The acid phosphatase activity of VPS has been experimentally demonstrated [].; GO: 0003993 acid phosphatase activity; PDB: 3PCT_C 2I34_A 2I33_A 1Z5U_D 1Z5G_A 2AUT_C 1Z88_B 3OCV_A 3OCZ_A 3OCX_A ....
Probab=31.20 E-value=36 Score=35.17 Aligned_cols=88 Identities=14% Similarity=0.162 Sum_probs=53.6
Q ss_pred CCCcchHHHHHHHhhCCCcEEEEcCCCHH---HHHHHHHHcccccCCcEEEecCCCCCeeEEeCCCcccccccchhhhhc
Q 003952 674 PIREDSAKILSELKNSSQDLAMITGDQAL---TACYVASQVHIVTKPVLILCPVKNGKVYEWVSPDETEKIQYSEKEVEG 750 (784)
Q Consensus 674 ~lr~da~~~I~~L~~agi~v~MITGDn~~---TA~~VA~~~gI~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 750 (784)
+.=|++.+.++.+++.|++|+.|||=+.. ....=-++.|+.....+++.+..... ......+|......
T Consensus 115 ~aip~a~~l~~~~~~~G~~V~~iT~R~~~~r~~T~~nL~~~G~~~~~~l~lr~~~~~~--------~~~~~~yK~~~r~~ 186 (229)
T PF03767_consen 115 PAIPGALELYNYARSRGVKVFFITGRPESQREATEKNLKKAGFPGWDHLILRPDKDPS--------KKSAVEYKSERRKE 186 (229)
T ss_dssp EEETTHHHHHHHHHHTTEEEEEEEEEETTCHHHHHHHHHHHTTSTBSCGEEEEESSTS--------S------SHHHHHH
T ss_pred cccHHHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHHcCCCccchhccccccccc--------cccccccchHHHHH
Confidence 44578999999999999999999995543 22223355676553455553322111 11123345544455
Q ss_pred cCCC-ee-EEEechhHHHHhc
Q 003952 751 LTDA-HD-LCIGGDCFEMLQQ 769 (784)
Q Consensus 751 l~~~-~~-l~~tGd~l~~l~~ 769 (784)
+.++ |+ ++..||-++.+..
T Consensus 187 i~~~Gy~Ii~~iGD~~~D~~~ 207 (229)
T PF03767_consen 187 IEKKGYRIIANIGDQLSDFSG 207 (229)
T ss_dssp HHHTTEEEEEEEESSGGGCHC
T ss_pred HHHcCCcEEEEeCCCHHHhhc
Confidence 5555 66 7799999998877
No 167
>TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase. This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812).
Probab=30.74 E-value=38 Score=33.17 Aligned_cols=27 Identities=22% Similarity=0.313 Sum_probs=24.3
Q ss_pred CCCcchHHHHHHHhhCCCcEEEEcCCC
Q 003952 674 PIREDSAKILSELKNSSQDLAMITGDQ 700 (784)
Q Consensus 674 ~lr~da~~~I~~L~~agi~v~MITGDn 700 (784)
++.|++.++|+.|+++|+++.++|.=+
T Consensus 26 ~~~pgv~e~L~~Lk~~G~~l~i~TN~~ 52 (176)
T TIGR00213 26 EFIDGVIDALRELKKMGYALVLVTNQS 52 (176)
T ss_pred EECCCHHHHHHHHHHCCCEEEEEeCCc
Confidence 357899999999999999999999755
No 168
>PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated
Probab=30.74 E-value=70 Score=31.36 Aligned_cols=27 Identities=15% Similarity=0.153 Sum_probs=24.9
Q ss_pred CCCcchHHHHHHHhhCCCcEEEEcCCC
Q 003952 674 PIREDSAKILSELKNSSQDLAMITGDQ 700 (784)
Q Consensus 674 ~lr~da~~~I~~L~~agi~v~MITGDn 700 (784)
.+.|++.++++.|++.|+++.++|..+
T Consensus 29 ~~~pgv~e~L~~Lk~~g~~l~I~Tn~~ 55 (181)
T PRK08942 29 IPIPGSIEAIARLKQAGYRVVVATNQS 55 (181)
T ss_pred EECCCHHHHHHHHHHCCCEEEEEeCCc
Confidence 468999999999999999999999876
No 169
>PRK10187 trehalose-6-phosphate phosphatase; Provisional
Probab=30.56 E-value=53 Score=34.76 Aligned_cols=40 Identities=18% Similarity=0.211 Sum_probs=35.3
Q ss_pred CCCcchHHHHHHHhh-CCCcEEEEcCCCHHHHHHHHHHccc
Q 003952 674 PIREDSAKILSELKN-SSQDLAMITGDQALTACYVASQVHI 713 (784)
Q Consensus 674 ~lr~da~~~I~~L~~-agi~v~MITGDn~~TA~~VA~~~gI 713 (784)
.+-++++++|+.|++ .|++++++||-....+....+.+++
T Consensus 36 ~i~~~~~~~L~~L~~~~g~~v~i~SGR~~~~~~~~~~~~~~ 76 (266)
T PRK10187 36 VVPDNILQGLQLLATANDGALALISGRSMVELDALAKPYRF 76 (266)
T ss_pred cCCHHHHHHHHHHHhCCCCcEEEEeCCCHHHHHHhcCcccc
Confidence 455889999999998 7999999999999999988887774
No 170
>cd05017 SIS_PGI_PMI_1 The members of this protein family contain the SIS (Sugar ISomerase) domain and have both the phosphoglucose isomerase (PGI) and the phosphomannose isomerase (PMI) functions. These functions catalyze the reversible reactions of glucose 6-phosphate to fructose 6-phosphate, and mannose 6-phosphate to fructose 6-phosphate, respectively at an equal rate. This protein contains two SIS domains. This alignment is based on the first SIS domain.
Probab=29.81 E-value=62 Score=29.44 Aligned_cols=36 Identities=17% Similarity=0.241 Sum_probs=27.5
Q ss_pred CcchHHHHHHHhhCCCcEEEEcCCCHHHHHHHHHHccc
Q 003952 676 REDSAKILSELKNSSQDLAMITGDQALTACYVASQVHI 713 (784)
Q Consensus 676 r~da~~~I~~L~~agi~v~MITGDn~~TA~~VA~~~gI 713 (784)
-+++.++++.+++.|++++-||++.++. ..|.+-|+
T Consensus 56 t~e~i~~~~~a~~~g~~iI~IT~~~~l~--~~~~~~~~ 91 (119)
T cd05017 56 TEETLSAVEQAKERGAKIVAITSGGKLL--EMAREHGV 91 (119)
T ss_pred CHHHHHHHHHHHHCCCEEEEEeCCchHH--HHHHHcCC
Confidence 4688899999999999999999988532 24554443
No 171
>PF14800 DUF4481: Domain of unknown function (DUF4481)
Probab=29.53 E-value=40 Score=35.76 Aligned_cols=66 Identities=14% Similarity=0.086 Sum_probs=36.1
Q ss_pred cccCCcceeeEEeecccccccccccchhhhHHHHHHHHhhccCCC---cch---hhhHHHHHHHHHHHHhhcccc
Q 003952 4 FHVGGKVVDRVDLLRKKHWVWRLDVWPFAILYSGWLIAIVPSIDF---GDA---AIVLGGLVAFHILVWLFTAWS 72 (784)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~---~~~---~~~~~~~~~~~~l~~l~~~w~ 72 (784)
-.+.+|.|.+..+|+-++.-+-.-+.-|+++ |..+|.....+ ..| +++-++.+++.+.+.|+.+|.
T Consensus 47 ~al~~p~VRRy~~yNs~~fr~~~a~I~yivl---w~~l~Stl~l~slg~~wv~~Llv~l~ai~lt~~l~lv~~~~ 118 (308)
T PF14800_consen 47 SALLDPQVRRYTLYNSRYFRLLVAVIFYIVL---WANLYSTLQLFSLGSHWVGWLLVNLAAIFLTMALILVFMRH 118 (308)
T ss_pred HhccchhheeeeeecchHHHHHHHHHHHHHH---HHHHHccchhhhcccHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3577899999999998876544322212222 33333222111 234 333333445666667777887
No 172
>cd04906 ACT_ThrD-I_1 First of two tandem C-terminal ACT domains of threonine dehydratase I (ThrD-I; L-threonine hydrolyase). This CD includes the first of two tandem C-terminal ACT domains of threonine dehydratase I (ThrD-I; L-threonine hydrolyase) which catalyzes the committed step in branched chain amino acid biosynthesis in plants and microorganisms, the pyridoxal 5'-phosphate (PLP)-dependent dehydration/deamination of L-threonine (or L-serine) to 2-ketobutyrate (or pyruvate). ThrD-I is a cooperative, feedback-regulated (isoleucine and valine) allosteric enzyme that forms a tetramer and contains four pyridoxal phosphate moieties. Members of this CD belong to the superfamily of ACT regulatory domains.
Probab=29.52 E-value=3.5e+02 Score=22.90 Aligned_cols=71 Identities=14% Similarity=0.225 Sum_probs=45.7
Q ss_pred CchhHHHHHHHHhhccCeEEEEEEEeCCCCChhhHhhhhhhhccCCcEEEEEEeecCCC-CcchHHHHHHHhhCCCcEEE
Q 003952 617 LPSSYIETYKKYTHQGSRVLALAFKSLPDMTVSDARSLHRDEVENGLTFAGFAVFNCPI-REDSAKILSELKNSSQDLAM 695 (784)
Q Consensus 617 ~p~~~~~~~~~~~~~G~Rvlala~k~l~~~~~~~~~~~~r~~~E~~l~flG~l~~~d~l-r~da~~~I~~L~~agi~v~M 695 (784)
.|..+.+.++.++ |.-+.-+.|+.... + .--..++++.+= +.+..++++.|+++|+++..
T Consensus 11 ~PG~L~~ll~~l~--~anI~~~~y~~~~~----------------~-~~~v~i~ie~~~~~~~~~~i~~~L~~~G~~~~~ 71 (85)
T cd04906 11 RPGSFKKFCELIG--PRNITEFNYRYADE----------------K-DAHIFVGVSVANGAEELAELLEDLKSAGYEVVD 71 (85)
T ss_pred CCcHHHHHHHHhC--CCceeEEEEEccCC----------------C-eeEEEEEEEeCCcHHHHHHHHHHHHHCCCCeEE
Confidence 3556666666666 44555566654321 1 112445677776 78899999999999999886
Q ss_pred EcCCCHHHHHHH
Q 003952 696 ITGDQALTACYV 707 (784)
Q Consensus 696 ITGDn~~TA~~V 707 (784)
+ .||..+..|.
T Consensus 72 ~-~~~~~~~~~l 82 (85)
T cd04906 72 L-SDDELAKTHL 82 (85)
T ss_pred C-CCCHHHHHHh
Confidence 5 4566555554
No 173
>TIGR00676 fadh2 5,10-methylenetetrahydrofolate reductase, prokaryotic form. This protein is an FAD-containing flavoprotein.
Probab=29.10 E-value=1.6e+02 Score=31.28 Aligned_cols=43 Identities=21% Similarity=0.284 Sum_probs=35.8
Q ss_pred cCCcEEEEEEeecCCCCcchHHHHHHHhhCCCc-EEEEcCCCHH
Q 003952 660 ENGLTFAGFAVFNCPIREDSAKILSELKNSSQD-LAMITGDQAL 702 (784)
Q Consensus 660 E~~l~flG~l~~~d~lr~da~~~I~~L~~agi~-v~MITGDn~~ 702 (784)
+.++..+--+...|.=|.+..+.+..++++|++ +..+|||.+.
T Consensus 56 ~~g~~~i~Hlt~r~~n~~~l~~~L~~~~~~Gi~nvL~l~GD~~~ 99 (272)
T TIGR00676 56 ETGIPTVPHLTCIGATREEIREILREYRELGIRHILALRGDPPK 99 (272)
T ss_pred hcCCCeeEEeeecCCCHHHHHHHHHHHHHCCCCEEEEeCCCCCC
Confidence 346777778888888888999999999999996 5559999983
No 174
>PRK11840 bifunctional sulfur carrier protein/thiazole synthase protein; Provisional
Probab=28.93 E-value=4e+02 Score=29.10 Aligned_cols=90 Identities=12% Similarity=0.067 Sum_probs=66.5
Q ss_pred HHHHHHHHhhccCeEEEEEEEeCCC--CChhh---------------------------HhhhhhhhccCCcEEEEEEee
Q 003952 621 YIETYKKYTHQGSRVLALAFKSLPD--MTVSD---------------------------ARSLHRDEVENGLTFAGFAVF 671 (784)
Q Consensus 621 ~~~~~~~~~~~G~Rvlala~k~l~~--~~~~~---------------------------~~~~~r~~~E~~l~flG~l~~ 671 (784)
.+...+.....|.-++.+|.|..+- ...+. ...+.|+....|+.=+=.+.=
T Consensus 96 ~~~~~~a~~asg~e~vTva~rr~~~~~~~~~~~~~~~~~~~~~~lpNTag~~ta~eAv~~a~lare~~~~~~iKlEvi~e 175 (326)
T PRK11840 96 FEETAAAVEASGAEIVTVAVRRVNVSDPGAPMLTDYIDPKKYTYLPNTAGCYTAEEAVRTLRLAREAGGWDLVKLEVLGD 175 (326)
T ss_pred HHHHHHHHHHhCCCEEEEEEEeecCcCCCcchHHHhhhhcCCEECccCCCCCCHHHHHHHHHHHHHhcCCCeEEEEEcCC
Confidence 4445566777888888888887651 11010 122456766777777777766
Q ss_pred cCCCCcchHHHHHHHhhC---CCcEEEEcCCCHHHHHHHHHH
Q 003952 672 NCPIREDSAKILSELKNS---SQDLAMITGDQALTACYVASQ 710 (784)
Q Consensus 672 ~d~lr~da~~~I~~L~~a---gi~v~MITGDn~~TA~~VA~~ 710 (784)
+.-+-||..++++..+.. |..|...+-|++.+|.+++.-
T Consensus 176 ~~~llpd~~~~v~aa~~L~~~Gf~v~~yc~~d~~~a~~l~~~ 217 (326)
T PRK11840 176 AKTLYPDMVETLKATEILVKEGFQVMVYCSDDPIAAKRLEDA 217 (326)
T ss_pred CCCcccCHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHhc
Confidence 667789999999999998 999989999999999998876
No 175
>TIGR01524 ATPase-IIIB_Mg magnesium-translocating P-type ATPase. The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis.
Probab=28.46 E-value=1.3e+03 Score=29.05 Aligned_cols=37 Identities=24% Similarity=0.382 Sum_probs=28.2
Q ss_pred EcCeEEEeecCCCCCCcEEEEcCCCCCCCCCCeecceeeEeeCee
Q 003952 261 RCGKWVKLAGTDLVPGDVVSIGRSSGQTGEDKSVPADMLILGGSA 305 (784)
Q Consensus 261 R~g~~~~I~s~~LvpGDiV~i~~ge~d~~~~~~vPaD~ill~G~~ 305 (784)
.-|....+...|.+|-|.+.++.. .+-+|=-.|.|+.
T Consensus 150 v~GDiV~l~~Gd~VPaDg~li~g~--------~l~VDES~LTGES 186 (867)
T TIGR01524 150 VPGDLIELAAGDIIPADARVISAR--------DLFINQSALTGES 186 (867)
T ss_pred CCCCEEEECCCCEEcccEEEEecC--------ceEEEcccccCCC
Confidence 358889999999999999999732 3556777777753
No 176
>PF13242 Hydrolase_like: HAD-hyrolase-like; PDB: 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A 2HX1_D 2X4D_A 3HLT_C 3L1U_B ....
Probab=28.10 E-value=64 Score=26.61 Aligned_cols=31 Identities=29% Similarity=0.225 Sum_probs=23.5
Q ss_pred HHHhhCCC---cEEEEcCCCHHHHHHHHHHccccc
Q 003952 684 SELKNSSQ---DLAMITGDQALTACYVASQVHIVT 715 (784)
Q Consensus 684 ~~L~~agi---~v~MITGDn~~TA~~VA~~~gI~~ 715 (784)
..+++.++ +++|| ||++.|=+..|+++|+..
T Consensus 12 ~a~~~~~~~~~~~~~V-GD~~~~Di~~a~~~G~~~ 45 (75)
T PF13242_consen 12 QALKRLGVDPSRCVMV-GDSLETDIEAAKAAGIDT 45 (75)
T ss_dssp HHHHHHTSGGGGEEEE-ESSTTTHHHHHHHTTSEE
T ss_pred HHHHHcCCCHHHEEEE-cCCcHhHHHHHHHcCCcE
Confidence 33344444 67777 999999999999999963
No 177
>KOG3040 consensus Predicted sugar phosphatase (HAD superfamily) [General function prediction only]
Probab=28.10 E-value=1.1e+02 Score=30.98 Aligned_cols=51 Identities=8% Similarity=0.124 Sum_probs=43.0
Q ss_pred EEEEEEeecCCCCcchHHHHHHHhhCCCcEEEEcCCCHHHHHHHHHH---cccc
Q 003952 664 TFAGFAVFNCPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQ---VHIV 714 (784)
Q Consensus 664 ~flG~l~~~d~lr~da~~~I~~L~~agi~v~MITGDn~~TA~~VA~~---~gI~ 714 (784)
.+-|.+-.++-.=|++.++++.|+.++.+|.-+|--....-..++++ ||+.
T Consensus 13 DlSGtLh~e~~avpga~eAl~rLr~~~~kVkFvTNttk~Sk~~l~~rL~rlgf~ 66 (262)
T KOG3040|consen 13 DLSGTLHIEDAAVPGAVEALKRLRDQHVKVKFVTNTTKESKRNLHERLQRLGFD 66 (262)
T ss_pred eccceEecccccCCCHHHHHHHHHhcCceEEEEecCcchhHHHHHHHHHHhCCC
Confidence 45689999999999999999999999999999998777776766665 5664
No 178
>TIGR01680 Veg_Stor_Prot vegetative storage protein. The proteins represented by this model are close relatives of the plant acid phosphatases (TIGR01675), are limited to members of the Phaseoleae including Glycine max (soybean) and Phaseolus vulgaris (kidney bean). These proteins are highly expressed in the leaves of repeatedly depodded plants. VSP differs most strinkingly from the acid phosphatases in the lack of the conserved nucleophilic aspartate residue in the N-terminus, thus, they should be inactive as phosphatases. This issue was confused by the publication in 1992 of an article claiming activity for the Glycine max VSP. In 1994 this assertion was refuted by the separation of the activity from the VSP.
Probab=27.93 E-value=1.7e+02 Score=31.11 Aligned_cols=90 Identities=16% Similarity=0.211 Sum_probs=55.9
Q ss_pred cCCCCcchHHHHHHHhhCCCcEEEEcCCCHH----HHHHHHHHcccccCCcEEEecCCCCCeeEEeCCCcccccccchhh
Q 003952 672 NCPIREDSAKILSELKNSSQDLAMITGDQAL----TACYVASQVHIVTKPVLILCPVKNGKVYEWVSPDETEKIQYSEKE 747 (784)
Q Consensus 672 ~d~lr~da~~~I~~L~~agi~v~MITGDn~~----TA~~VA~~~gI~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~ 747 (784)
+.|.=|++.+..+.+++.|++|+.|||-... |..+.. +.|+.....+++.+..+.. ......++...
T Consensus 143 ~ApAlp~al~ly~~l~~~G~kIf~VSgR~e~~r~aT~~NL~-kaGy~~~~~LiLR~~~D~~--------~~~av~yKs~~ 213 (275)
T TIGR01680 143 EAPALPETLKNYNKLVSLGFKIIFLSGRLKDKQAVTEANLK-KAGYHTWEKLILKDPQDNS--------AENAVEYKTAA 213 (275)
T ss_pred cCCCChHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHH-HcCCCCcceeeecCCCCCc--------cchhHHHHHHH
Confidence 4566779999999999999999999998753 444442 3677654556663221100 01122233222
Q ss_pred hhc-cCCCee-EEEechhHHHHhcC
Q 003952 748 VEG-LTDAHD-LCIGGDCFEMLQQT 770 (784)
Q Consensus 748 ~~~-l~~~~~-l~~tGd~l~~l~~~ 770 (784)
.++ ..+.|+ +...||-++.+...
T Consensus 214 R~~li~eGYrIv~~iGDq~sDl~G~ 238 (275)
T TIGR01680 214 RAKLIQEGYNIVGIIGDQWNDLKGE 238 (275)
T ss_pred HHHHHHcCceEEEEECCCHHhccCC
Confidence 222 235577 66899999999754
No 179
>TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116.
Probab=27.48 E-value=1.3e+03 Score=28.93 Aligned_cols=92 Identities=20% Similarity=0.155 Sum_probs=52.7
Q ss_pred HHHHhhhhcccchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHh---hhh----CCceEEE----EEcCeEEEeecCCC
Q 003952 205 FQVFCVGLWCLDEYWYYSLFTLFMLFMFESTMAKSRLKTLTEIRR---VRV----DNQTIMV----HRCGKWVKLAGTDL 273 (784)
Q Consensus 205 fqi~~~~lw~l~~y~~~~~~~l~~l~~~~~~~~~~~~~~~~~l~~---~~~----~~~~v~V----~R~g~~~~I~s~~L 273 (784)
--+++++++.+.+.....+++++. ..+.....++..+.+++|++ ... +.....| +.-|....+...|.
T Consensus 70 aa~ls~~~g~~~~~~~i~~~i~~~-~~i~~~qe~~a~~~l~~L~~l~~~~~~ViRdg~~~~I~~~eLv~GDiv~l~~Gd~ 148 (884)
T TIGR01522 70 SAVISVFMGNIDDAVSITLAILIV-VTVGFVQEYRSEKSLEALNKLVPPECHLIREGKLEHVLASTLVPGDLVCLSVGDR 148 (884)
T ss_pred HHHHHHHHcchhhHHHHHhHHHHH-HHHHHHHHHHHHHHHHHHhccCCCeeEEEECCEEEEEEHHHCccCCEEEecCCCE
Confidence 344555666666666554444433 33444444455566666652 111 2222222 23478899999999
Q ss_pred CCCcEEEEcCCCCCCCCCCeecceeeEeeCee
Q 003952 274 VPGDVVSIGRSSGQTGEDKSVPADMLILGGSA 305 (784)
Q Consensus 274 vpGDiV~i~~ge~d~~~~~~vPaD~ill~G~~ 305 (784)
+|-|.+.++.. ..=+|=-.|.|+.
T Consensus 149 IPaDg~ii~g~--------~l~VDES~LTGES 172 (884)
T TIGR01522 149 VPADLRIVEAV--------DLSIDESNLTGET 172 (884)
T ss_pred EeeeEEEEEcC--------ceEEEcccccCCC
Confidence 99999999832 2446666666753
No 180
>TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase. This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812).
Probab=27.31 E-value=3.4e+02 Score=26.34 Aligned_cols=38 Identities=16% Similarity=0.211 Sum_probs=28.1
Q ss_pred CCcchHHHHHHHhhCCC---cEEEEcCCCHHHHHHHHHHcccc
Q 003952 675 IREDSAKILSELKNSSQ---DLAMITGDQALTACYVASQVHIV 714 (784)
Q Consensus 675 lr~da~~~I~~L~~agi---~v~MITGDn~~TA~~VA~~~gI~ 714 (784)
-||+..-....+++.|+ +++|| ||. .+-+.-|++.|+.
T Consensus 105 ~KP~p~~~~~a~~~~~~~~~~~v~V-GDs-~~Di~aA~~aG~~ 145 (176)
T TIGR00213 105 RKPKPGMLLQARKELHIDMAQSYMV-GDK-LEDMQAGVAAKVK 145 (176)
T ss_pred CCCCHHHHHHHHHHcCcChhhEEEE-cCC-HHHHHHHHHCCCc
Confidence 36666555566677776 47775 997 4899999999984
No 181
>TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent.
Probab=26.89 E-value=3.2e+02 Score=28.23 Aligned_cols=89 Identities=9% Similarity=-0.048 Sum_probs=49.8
Q ss_pred hhHHHHHHHHhhccCeEEEEEEEeCCCCChhhHhh-hhhhhccCCcEEEEEEeecC--CCCcchHHHHHHHhhCCCc-E-
Q 003952 619 SSYIETYKKYTHQGSRVLALAFKSLPDMTVSDARS-LHRDEVENGLTFAGFAVFNC--PIREDSAKILSELKNSSQD-L- 693 (784)
Q Consensus 619 ~~~~~~~~~~~~~G~Rvlala~k~l~~~~~~~~~~-~~r~~~E~~l~flG~l~~~d--~lr~da~~~I~~L~~agi~-v- 693 (784)
+...+.++.+.++|+++-.+.- ........ +.+-.+.. .-|-..++-++ .-||+-......+++.|+. .
T Consensus 102 pg~~e~L~~L~~~g~~l~IvT~-----~~~~~~~~~l~~~gl~~-~f~d~ii~~~~~~~~KP~p~~~~~a~~~l~~~~~~ 175 (253)
T TIGR01422 102 PGVIEVIAYLRARGIKIGSTTG-----YTREMMDVVAPEAALQG-YRPDYNVTTDDVPAGRPAPWMALKNAIELGVYDVA 175 (253)
T ss_pred CCHHHHHHHHHHCCCeEEEECC-----CcHHHHHHHHHHHHhcC-CCCceEEccccCCCCCCCHHHHHHHHHHcCCCCch
Confidence 3455667778888988655442 11111111 11111111 11122222222 3477777777778888863 1
Q ss_pred -EEEcCCCHHHHHHHHHHcccc
Q 003952 694 -AMITGDQALTACYVASQVHIV 714 (784)
Q Consensus 694 -~MITGDn~~TA~~VA~~~gI~ 714 (784)
++.=||++ +-+.-|+..|+.
T Consensus 176 ~~l~IGDs~-~Di~aA~~aGi~ 196 (253)
T TIGR01422 176 ACVKVGDTV-PDIEEGRNAGMW 196 (253)
T ss_pred heEEECCcH-HHHHHHHHCCCe
Confidence 44459998 999999999995
No 182
>TIGR01501 MthylAspMutase methylaspartate mutase, S subunit. This model represents the S (sigma) subunit of methylaspartate mutase (glutamate mutase), a cobalamin-dependent enzyme that catalyzes the first step in a pathway of glutamate fermentation.
Probab=26.88 E-value=1.9e+02 Score=27.22 Aligned_cols=80 Identities=11% Similarity=0.059 Sum_probs=52.6
Q ss_pred HHhhccCeEEEEEEEeCCCCChhhHhhhhhhhccCCcEEEEEEeecCCCCcchHHHHHHHhhCCC--cEEEEcCCC----
Q 003952 627 KYTHQGSRVLALAFKSLPDMTVSDARSLHRDEVENGLTFAGFAVFNCPIREDSAKILSELKNSSQ--DLAMITGDQ---- 700 (784)
Q Consensus 627 ~~~~~G~Rvlala~k~l~~~~~~~~~~~~r~~~E~~l~flG~l~~~d~lr~da~~~I~~L~~agi--~v~MITGDn---- 700 (784)
-+...|++|+-++...- .++ .-+...|.+-.++|+-.+.-.--+..+++++.|+++|. ..+|+=|--
T Consensus 24 ~l~~~GfeVi~LG~~v~----~e~---~v~aa~~~~adiVglS~l~~~~~~~~~~~~~~l~~~gl~~~~vivGG~~vi~~ 96 (134)
T TIGR01501 24 AFTNAGFNVVNLGVLSP----QEE---FIKAAIETKADAILVSSLYGHGEIDCKGLRQKCDEAGLEGILLYVGGNLVVGK 96 (134)
T ss_pred HHHHCCCEEEECCCCCC----HHH---HHHHHHHcCCCEEEEecccccCHHHHHHHHHHHHHCCCCCCEEEecCCcCcCh
Confidence 45678999999985332 222 22223345667788777777767789999999999987 456677631
Q ss_pred --HHHHHHHHHHccc
Q 003952 701 --ALTACYVASQVHI 713 (784)
Q Consensus 701 --~~TA~~VA~~~gI 713 (784)
...-..-++++|+
T Consensus 97 ~d~~~~~~~l~~~Gv 111 (134)
T TIGR01501 97 QDFPDVEKRFKEMGF 111 (134)
T ss_pred hhhHHHHHHHHHcCC
Confidence 1112345788995
No 183
>TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein. The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity.
Probab=26.74 E-value=4.3e+02 Score=26.15 Aligned_cols=89 Identities=16% Similarity=0.015 Sum_probs=51.6
Q ss_pred chhHHHHHHHHhhccCeEEEEEEEeCCCCChhhHh-hhhhhhccCCcEEEEEEeecC--CCCcchHHHHHHHhhCCCcE-
Q 003952 618 PSSYIETYKKYTHQGSRVLALAFKSLPDMTVSDAR-SLHRDEVENGLTFAGFAVFNC--PIREDSAKILSELKNSSQDL- 693 (784)
Q Consensus 618 p~~~~~~~~~~~~~G~Rvlala~k~l~~~~~~~~~-~~~r~~~E~~l~flG~l~~~d--~lr~da~~~I~~L~~agi~v- 693 (784)
.+...+.++.+.++|+++..+.-+.- .... .+.+-.+.. .|-.+++-++ ..||+..-..+.+++.|++.
T Consensus 77 ~~g~~~~L~~L~~~g~~~~i~Sn~~~-----~~~~~~l~~~~l~~--~f~~i~~~~~~~~~KP~~~~~~~~~~~~~~~~~ 149 (205)
T TIGR01454 77 FPGVPELLAELRADGVGTAIATGKSG-----PRARSLLEALGLLP--LFDHVIGSDEVPRPKPAPDIVREALRLLDVPPE 149 (205)
T ss_pred CCCHHHHHHHHHHCCCeEEEEeCCch-----HHHHHHHHHcCChh--heeeEEecCcCCCCCCChHHHHHHHHHcCCChh
Confidence 34556677788889998877663211 1111 111111111 1223333322 35777766666677777742
Q ss_pred -EEEcCCCHHHHHHHHHHcccc
Q 003952 694 -AMITGDQALTACYVASQVHIV 714 (784)
Q Consensus 694 -~MITGDn~~TA~~VA~~~gI~ 714 (784)
++.=||+. .-+..|+++||.
T Consensus 150 ~~l~igD~~-~Di~aA~~~Gi~ 170 (205)
T TIGR01454 150 DAVMVGDAV-TDLASARAAGTA 170 (205)
T ss_pred heEEEcCCH-HHHHHHHHcCCe
Confidence 56679986 799999999995
No 184
>TIGR02329 propionate_PrpR propionate catabolism operon regulatory protein PrpR. At least five distinct pathways exists for the catabolism of propionate by way of propionyl-CoA. Members of this family represent the transcriptional regulatory protein PrpR, whose gene is found in most cases divergently transcribed from an operon for the methylcitric acid cycle of propionate catabolism. 2-methylcitric acid, a catabolite by this pathway, is a coactivator of PrpR.
Probab=26.70 E-value=4.3e+02 Score=31.00 Aligned_cols=80 Identities=11% Similarity=0.186 Sum_probs=50.6
Q ss_pred HHHHHHHHhhccCeEEEEEEEeCCCCChhhHhhhhhhhccCCcEEEEEEeecCCCCcchHHHHHHHhhCCCcEEEEcCCC
Q 003952 621 YIETYKKYTHQGSRVLALAFKSLPDMTVSDARSLHRDEVENGLTFAGFAVFNCPIREDSAKILSELKNSSQDLAMITGDQ 700 (784)
Q Consensus 621 ~~~~~~~~~~~G~Rvlala~k~l~~~~~~~~~~~~r~~~E~~l~flG~l~~~d~lr~da~~~I~~L~~agi~v~MITGDn 700 (784)
+-..+......+.++-.++|..+.. .+..+ .+-+.-++.. ..+.+ ..|+.+.|++|++.|+++++ ||.
T Consensus 86 il~al~~a~~~~~~ia~vg~~~~~~----~~~~~-~~ll~~~i~~---~~~~~--~~e~~~~~~~l~~~G~~~vi--G~~ 153 (526)
T TIGR02329 86 VMQALARARRIASSIGVVTHQDTPP----ALRRF-QAAFNLDIVQ---RSYVT--EEDARSCVNDLRARGIGAVV--GAG 153 (526)
T ss_pred HHHHHHHHHhcCCcEEEEecCcccH----HHHHH-HHHhCCceEE---EEecC--HHHHHHHHHHHHHCCCCEEE--CCh
Confidence 3344444455577888888865532 11111 1112222222 22222 57999999999999999888 777
Q ss_pred HHHHHHHHHHcccc
Q 003952 701 ALTACYVASQVHIV 714 (784)
Q Consensus 701 ~~TA~~VA~~~gI~ 714 (784)
++...|++.|+.
T Consensus 154 --~~~~~A~~~gl~ 165 (526)
T TIGR02329 154 --LITDLAEQAGLH 165 (526)
T ss_pred --HHHHHHHHcCCc
Confidence 678999999995
No 185
>TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668. This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family.
Probab=25.75 E-value=1.5e+02 Score=28.90 Aligned_cols=85 Identities=9% Similarity=0.147 Sum_probs=51.9
Q ss_pred CchhHHHHHHHHhhccCeEEEEEEEeCCCCChhhHhhhhhhhccCCcEEEEEEeecCCCCcchHHHHHHHhhCCCc---E
Q 003952 617 LPSSYIETYKKYTHQGSRVLALAFKSLPDMTVSDARSLHRDEVENGLTFAGFAVFNCPIREDSAKILSELKNSSQD---L 693 (784)
Q Consensus 617 ~p~~~~~~~~~~~~~G~Rvlala~k~l~~~~~~~~~~~~r~~~E~~l~flG~l~~~d~lr~da~~~I~~L~~agi~---v 693 (784)
..+...+.++.+.++|+++..+.-+.- ......+. + ..++.+ .....||+..-....+++.|++ +
T Consensus 44 ~~pgv~e~L~~Lk~~g~~l~I~Sn~~~----~~~~~~~~-~--~~gl~~-----~~~~~KP~p~~~~~~l~~~~~~~~~~ 111 (170)
T TIGR01668 44 AYPALRDWIEELKAAGRKLLIVSNNAG----EQRAKAVE-K--ALGIPV-----LPHAVKPPGCAFRRAHPEMGLTSEQV 111 (170)
T ss_pred cChhHHHHHHHHHHcCCEEEEEeCCch----HHHHHHHH-H--HcCCEE-----EcCCCCCChHHHHHHHHHcCCCHHHE
Confidence 345566778888899998877763210 01111110 0 122322 1234577666666667777773 5
Q ss_pred EEEcCCCHHHHHHHHHHcccc
Q 003952 694 AMITGDQALTACYVASQVHIV 714 (784)
Q Consensus 694 ~MITGDn~~TA~~VA~~~gI~ 714 (784)
+|| ||+..+-+.-|+++|+.
T Consensus 112 l~I-GDs~~~Di~aA~~aGi~ 131 (170)
T TIGR01668 112 AVV-GDRLFTDVMGGNRNGSY 131 (170)
T ss_pred EEE-CCcchHHHHHHHHcCCe
Confidence 555 99999999999999994
No 186
>PF02219 MTHFR: Methylenetetrahydrofolate reductase; InterPro: IPR003171 This family includes the 5,10-methylenetetrahydrofolate reductase 1.7.99.5 from EC from bacteria and methylenetetrahydrofolate reductase 1.5.1.20 from EC from eukaryotes. The structure for this domain is known [] to be a TIM barrel.; GO: 0004489 methylenetetrahydrofolate reductase (NADPH) activity, 0006555 methionine metabolic process, 0055114 oxidation-reduction process; PDB: 3IJD_B 1B5T_B 3FSU_C 1ZPT_C 2FMO_B 3FST_C 2FMN_C 1ZP3_A 1ZP4_B 1ZRQ_B ....
Probab=24.96 E-value=1.6e+02 Score=31.49 Aligned_cols=44 Identities=18% Similarity=0.106 Sum_probs=34.5
Q ss_pred cCCcEEEEEEeecCCCCcchHHHHHHHhhCCC-cEEEEcCCCHHH
Q 003952 660 ENGLTFAGFAVFNCPIREDSAKILSELKNSSQ-DLAMITGDQALT 703 (784)
Q Consensus 660 E~~l~flG~l~~~d~lr~da~~~I~~L~~agi-~v~MITGDn~~T 703 (784)
+.++..+--+...|.=|.+..+.+..+++.|| .+..+|||.+..
T Consensus 68 ~~g~~~i~Hlt~rd~n~~~l~~~L~~~~~~Gi~niL~l~GD~~~~ 112 (287)
T PF02219_consen 68 ETGIEPIPHLTCRDRNREALQSDLLGAHALGIRNILALTGDPPKG 112 (287)
T ss_dssp HTT--EEEEEESTTSBHHHHHHHHHHHHHTT--EEEEESS-TSTT
T ss_pred HhCCceEEeecccCCCHHHHHHHHHHHHHcCCCeEEEecCCCCCC
Confidence 46888888888888888899999999999999 689999998654
No 187
>PF13275 S4_2: S4 domain; PDB: 1P9K_A.
Probab=24.65 E-value=41 Score=27.44 Aligned_cols=25 Identities=40% Similarity=0.508 Sum_probs=14.3
Q ss_pred EEEEcCeEEEeecCCCCCCcEEEEc
Q 003952 258 MVHRCGKWVKLAGTDLVPGDVVSIG 282 (784)
Q Consensus 258 ~V~R~g~~~~I~s~~LvpGDiV~i~ 282 (784)
.|..||+...-....|.|||+|.+.
T Consensus 34 ~V~VNGe~e~rrg~Kl~~GD~V~~~ 58 (65)
T PF13275_consen 34 EVKVNGEVETRRGKKLRPGDVVEID 58 (65)
T ss_dssp HHEETTB----SS----SSEEEEET
T ss_pred ceEECCEEccccCCcCCCCCEEEEC
Confidence 3667999888899999999999994
No 188
>cd01137 PsaA Metal binding protein PsaA. These proteins have been shown to function as initial receptors in ABC transport of Mn2+ and as surface adhesins in some eubacterial species. They belong to the TroA superfamily of periplasmic metal binding proteins that share a distinct fold and ligand binding mechanism. A typical TroA protein is comprised of two globular subdomains connected by a single helix and can bind the metal ion in the cleft between these domains. In addition, these proteins sometimes have a low complexity region containing a metal-binding histidine-rich motif (repetitive HDH sequence).
Probab=24.38 E-value=2.7e+02 Score=29.73 Aligned_cols=54 Identities=15% Similarity=0.073 Sum_probs=42.3
Q ss_pred CCcEEEEEEeecCCCCc---chHHHHHHHhhCCCcEEEE-cCCCHHHHHHHHHHcccc
Q 003952 661 NGLTFAGFAVFNCPIRE---DSAKILSELKNSSQDLAMI-TGDQALTACYVASQVHIV 714 (784)
Q Consensus 661 ~~l~flG~l~~~d~lr~---da~~~I~~L~~agi~v~MI-TGDn~~TA~~VA~~~gI~ 714 (784)
-++..+|.+.+...-.| +..+.++.+++.+++++.. .+=+..++..+|++.|+-
T Consensus 194 yGl~~~~~~~~~~~~eps~~~l~~l~~~ik~~~v~~if~e~~~~~~~~~~ia~~~gv~ 251 (287)
T cd01137 194 YGLKEAYLWPINTEEEGTPKQVATLIEQVKKEKVPAVFVESTVNDRLMKQVAKETGAK 251 (287)
T ss_pred cCCeEeecccCCCCCCCCHHHHHHHHHHHHHhCCCEEEEeCCCChHHHHHHHHHhCCc
Confidence 57888888877544444 4477888889999997765 777888999999999984
No 189
>smart00306 HintN Hint (Hedgehog/Intein) domain N-terminal region. Hedgehog/Intein domain, N-terminal region. Domain has been split to accommodate large insertions of endonucleases.
Probab=23.82 E-value=88 Score=26.89 Aligned_cols=29 Identities=31% Similarity=0.524 Sum_probs=22.6
Q ss_pred CceEEEEEcCeEEEeecCCCCCCcEEEEc
Q 003952 254 NQTIMVHRCGKWVKLAGTDLVPGDVVSIG 282 (784)
Q Consensus 254 ~~~v~V~R~g~~~~I~s~~LvpGDiV~i~ 282 (784)
...+.+.++|+.+.+.+++|.+||.|.+.
T Consensus 71 ~H~~~~~~~~~~~w~~a~~l~~gd~v~~~ 99 (100)
T smart00306 71 DHLLLVRDGGKLVWVFASELKPGDYVLVP 99 (100)
T ss_pred CCEEEEecCCcEEEEEHHHCCCCCEEEec
Confidence 34566777777677889999999999875
No 190
>cd02070 corrinoid_protein_B12-BD B12 binding domain of corrinoid proteins. A family of small methanogenic corrinoid proteins that bind methyl-Co(III) 5-hydroxybenzimidazolylcobamide as a cofactor. They play a role on the methanogenesis from trimethylamine, dimethylamine or monomethylamine, which is initiated by a series of corrinoid-dependent methyltransferases.
Probab=23.73 E-value=1e+02 Score=31.09 Aligned_cols=80 Identities=14% Similarity=0.234 Sum_probs=55.0
Q ss_pred HHHhhccCeEEEEEEEeCCCCChhhHhhhhhhhccCCcEEEEEEeecCCCCcchHHHHHHHhhCCC--cE-EEEcCCCHH
Q 003952 626 KKYTHQGSRVLALAFKSLPDMTVSDARSLHRDEVENGLTFAGFAVFNCPIREDSAKILSELKNSSQ--DL-AMITGDQAL 702 (784)
Q Consensus 626 ~~~~~~G~Rvlala~k~l~~~~~~~~~~~~r~~~E~~l~flG~l~~~d~lr~da~~~I~~L~~agi--~v-~MITGDn~~ 702 (784)
.-+...|++|+.++. .+| .++ +-+.-.+.+-.++|+-.....--+..++.|+.||+.+. ++ +|+=| .+.
T Consensus 104 ~~l~~~G~~vi~lG~-~~p---~~~---l~~~~~~~~~d~v~lS~~~~~~~~~~~~~i~~lr~~~~~~~~~i~vGG-~~~ 175 (201)
T cd02070 104 TMLEANGFEVIDLGR-DVP---PEE---FVEAVKEHKPDILGLSALMTTTMGGMKEVIEALKEAGLRDKVKVMVGG-APV 175 (201)
T ss_pred HHHHHCCCEEEECCC-CCC---HHH---HHHHHHHcCCCEEEEeccccccHHHHHHHHHHHHHCCCCcCCeEEEEC-CcC
Confidence 356789999988872 222 222 22222345677888888777888999999999999987 66 45555 555
Q ss_pred HHHHHHHHcccc
Q 003952 703 TACYVASQVHIV 714 (784)
Q Consensus 703 TA~~VA~~~gI~ 714 (784)
+. ..++++|-.
T Consensus 176 ~~-~~~~~~GaD 186 (201)
T cd02070 176 NQ-EFADEIGAD 186 (201)
T ss_pred CH-HHHHHcCCc
Confidence 53 578888754
No 191
>PLN02779 haloacid dehalogenase-like hydrolase family protein
Probab=23.36 E-value=95 Score=33.19 Aligned_cols=39 Identities=10% Similarity=0.244 Sum_probs=33.4
Q ss_pred CCCcchHHHHHHHhhCCCcEEEEcCCCHHHHHHHHHHcc
Q 003952 674 PIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVH 712 (784)
Q Consensus 674 ~lr~da~~~I~~L~~agi~v~MITGDn~~TA~~VA~~~g 712 (784)
++.|++.+.++.|++.|+++.++|+-+......+=+..+
T Consensus 144 ~l~pGv~elL~~L~~~g~~l~IvTn~~~~~~~~~l~~~~ 182 (286)
T PLN02779 144 PLRPGVLRLMDEALAAGIKVAVCSTSNEKAVSKIVNTLL 182 (286)
T ss_pred CchhhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhc
Confidence 678999999999999999999999988877776655553
No 192
>PRK09456 ?-D-glucose-1-phosphatase; Provisional
Probab=23.16 E-value=96 Score=30.85 Aligned_cols=33 Identities=12% Similarity=0.424 Sum_probs=28.1
Q ss_pred CCCcchHHHHHHHhhCCCcEEEEcCCCHHHHHH
Q 003952 674 PIREDSAKILSELKNSSQDLAMITGDQALTACY 706 (784)
Q Consensus 674 ~lr~da~~~I~~L~~agi~v~MITGDn~~TA~~ 706 (784)
++.|++.++++.|++.|+++.++|.=+......
T Consensus 84 ~~~~g~~e~L~~l~~~g~~~~i~Sn~~~~~~~~ 116 (199)
T PRK09456 84 ALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTF 116 (199)
T ss_pred ccCHHHHHHHHHHHhCCCcEEEEcCCchhhHHH
Confidence 478999999999999999999999876655443
No 193
>cd00738 HGTP_anticodon HGTP anticodon binding domain, as found at the C-terminus of histidyl, glycyl, threonyl and prolyl tRNA synthetases, which are classified as a group of class II aminoacyl-tRNA synthetases (aaRS). In aaRSs, the anticodon binding domain is responsible for specificity in tRNA-binding, so that the activated amino acid is transferred to a ribose 3' OH group of the appropriate tRNA only. This domain is also found in the accessory subunit of mitochondrial polymerase gamma (Pol gamma b).
Probab=23.07 E-value=2.5e+02 Score=23.57 Aligned_cols=40 Identities=15% Similarity=0.040 Sum_probs=31.0
Q ss_pred CCCcchHHHHHHHhhCCCcEEE-EcCCCHHHHHHHHHHccc
Q 003952 674 PIREDSAKILSELKNSSQDLAM-ITGDQALTACYVASQVHI 713 (784)
Q Consensus 674 ~lr~da~~~I~~L~~agi~v~M-ITGDn~~TA~~VA~~~gI 713 (784)
..++.+.+..+.||+.|+++.+ .++.+..-...-|.+.|+
T Consensus 15 ~~~~~a~~~~~~Lr~~g~~v~~~~~~~~~~k~~~~a~~~g~ 55 (94)
T cd00738 15 EAREYAQKLLNALLANGIRVLYDDRERKIGKKFREADLRGV 55 (94)
T ss_pred HHHHHHHHHHHHHHHCCCEEEecCCCcCHhHHHHHHHhCCC
Confidence 4566777888899999999888 456777777777777776
No 194
>PF06783 UPF0239: Uncharacterised protein family (UPF0239); InterPro: IPR009621 This is a group of transmembrane proteins of unknown function.; GO: 0016021 integral to membrane
Probab=22.83 E-value=1e+02 Score=26.46 Aligned_cols=30 Identities=23% Similarity=0.300 Sum_probs=18.6
Q ss_pred CCCCccHHHHHHHHhhhhHHHHHHHhhhhc
Q 003952 184 EYPQPTFQKLMKENCMEPFFVFQVFCVGLW 213 (784)
Q Consensus 184 ~~~~~s~~~ll~~~~~~pf~vfqi~~~~lw 213 (784)
++|.|+|++.+.+.=+-.=-+||++|++..
T Consensus 11 ei~Eet~~e~llRYGLf~GAIFQliCilAi 40 (85)
T PF06783_consen 11 EIPEETFFENLLRYGLFVGAIFQLICILAI 40 (85)
T ss_pred cCCcchHHHHHHHHHHHHHHHHHHHHHHhe
Confidence 356778888777643222246888887543
No 195
>PF12689 Acid_PPase: Acid Phosphatase; InterPro: IPR010036 This entry represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterised as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues [, ].; GO: 0016791 phosphatase activity; PDB: 1U7P_A 1U7O_A 2WM8_A.
Probab=22.78 E-value=1.3e+02 Score=29.66 Aligned_cols=41 Identities=27% Similarity=0.261 Sum_probs=31.8
Q ss_pred CCCcchHHHHHHHhhCCCcEEEEc-CCCHHHHHHHHHHcccc
Q 003952 674 PIREDSAKILSELKNSSQDLAMIT-GDQALTACYVASQVHIV 714 (784)
Q Consensus 674 ~lr~da~~~I~~L~~agi~v~MIT-GDn~~TA~~VA~~~gI~ 714 (784)
.+-||+++++++|++.|+++.+.| =|.|..|..+=+.++|.
T Consensus 45 ~lypdv~~iL~~L~~~gv~lavASRt~~P~~A~~~L~~l~i~ 86 (169)
T PF12689_consen 45 SLYPDVPEILQELKERGVKLAVASRTDEPDWARELLKLLEID 86 (169)
T ss_dssp ---TTHHHHHHHHHHCT--EEEEE--S-HHHHHHHHHHTT-C
T ss_pred EeCcCHHHHHHHHHHCCCEEEEEECCCChHHHHHHHHhcCCC
Confidence 467999999999999999999999 58999999999999998
No 196
>TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549).
Probab=22.38 E-value=5.4e+02 Score=25.61 Aligned_cols=91 Identities=15% Similarity=0.082 Sum_probs=52.9
Q ss_pred chhHHHHHHHHhhccCeEEEEEEEeCCCCChhhHhhhhhhhccCCcEEEEEEeecC--CCCcchHHHHHHHhhCCCc--E
Q 003952 618 PSSYIETYKKYTHQGSRVLALAFKSLPDMTVSDARSLHRDEVENGLTFAGFAVFNC--PIREDSAKILSELKNSSQD--L 693 (784)
Q Consensus 618 p~~~~~~~~~~~~~G~Rvlala~k~l~~~~~~~~~~~~r~~~E~~l~flG~l~~~d--~lr~da~~~I~~L~~agi~--v 693 (784)
.+...+.++.+.++|+++..+.-..- ......+.+-.+.. -|-+++.-++ ..||+..-....+++.|+. =
T Consensus 96 ~~g~~~~L~~L~~~g~~~~i~Tn~~~----~~~~~~l~~~~l~~--~f~~i~~~~~~~~~KP~~~~~~~~~~~~~~~~~~ 169 (221)
T TIGR02253 96 YPGVRDTLMELRESGYRLGIITDGLP----VKQWEKLERLGVRD--FFDAVITSEEEGVEKPHPKIFYAALKRLGVKPEE 169 (221)
T ss_pred CCCHHHHHHHHHHCCCEEEEEeCCch----HHHHHHHHhCChHH--hccEEEEeccCCCCCCCHHHHHHHHHHcCCChhh
Confidence 34567778888889988666552210 00011112211111 1222332222 2467766677777787873 2
Q ss_pred EEEcCCCHHHHHHHHHHcccc
Q 003952 694 AMITGDQALTACYVASQVHIV 714 (784)
Q Consensus 694 ~MITGDn~~TA~~VA~~~gI~ 714 (784)
++.=||++.+-+.-|+++|+.
T Consensus 170 ~~~igDs~~~di~~A~~aG~~ 190 (221)
T TIGR02253 170 AVMVGDRLDKDIKGAKNLGMK 190 (221)
T ss_pred EEEECCChHHHHHHHHHCCCE
Confidence 455599999999999999996
No 197
>TIGR00640 acid_CoA_mut_C methylmalonyl-CoA mutase C-terminal domain. Methylmalonyl-CoA mutase (EC 5.4.99.2) catalyzes a reversible isomerization between L-methylmalonyl-CoA and succinyl-CoA. The enzyme uses an adenosylcobalamin cofactor. It may be a homodimer, as in mitochondrion, or a heterodimer with partially homologous beta chain that does not bind the adenosylcobalamin cofactor, as in Propionibacterium freudenreichii. The most similar archaeal sequences are separate chains, such as AF2215 and AF2219 of Archaeoglobus fulgidus, that correspond roughly to the first 500 and last 130 residues, respectively of known methylmalonyl-CoA mutases. This model describes the C-terminal domain subfamily. In a neighbor-joining tree (methylaspartate mutase S chain as the outgroup), AF2219 branches with a coenzyme B12-dependent enzyme known not to be 5.4.99.2.
Probab=22.32 E-value=1.9e+02 Score=27.12 Aligned_cols=82 Identities=15% Similarity=0.148 Sum_probs=56.9
Q ss_pred HHHhhccCeEEEEEEEeCCCCChhhHhhhhhhhccCCcEEEEEEeecCCCCcchHHHHHHHhhCCC-cE-EEEcCCCHHH
Q 003952 626 KKYTHQGSRVLALAFKSLPDMTVSDARSLHRDEVENGLTFAGFAVFNCPIREDSAKILSELKNSSQ-DL-AMITGDQALT 703 (784)
Q Consensus 626 ~~~~~~G~Rvlala~k~l~~~~~~~~~~~~r~~~E~~l~flG~l~~~d~lr~da~~~I~~L~~agi-~v-~MITGDn~~T 703 (784)
.-+...|+.|+-++... +.+ ..-+...|.+-..+|+-.+...-.+..+++++.|+++|. ++ +|+=|-.+.-
T Consensus 24 ~~l~~~GfeVi~lg~~~----s~e---~~v~aa~e~~adii~iSsl~~~~~~~~~~~~~~L~~~g~~~i~vivGG~~~~~ 96 (132)
T TIGR00640 24 TAYADLGFDVDVGPLFQ----TPE---EIARQAVEADVHVVGVSSLAGGHLTLVPALRKELDKLGRPDILVVVGGVIPPQ 96 (132)
T ss_pred HHHHhCCcEEEECCCCC----CHH---HHHHHHHHcCCCEEEEcCchhhhHHHHHHHHHHHHhcCCCCCEEEEeCCCChH
Confidence 45678899999887421 112 122234467788899988888888999999999999987 44 5555544444
Q ss_pred HHHHHHHcccc
Q 003952 704 ACYVASQVHIV 714 (784)
Q Consensus 704 A~~VA~~~gI~ 714 (784)
-..--+++|+.
T Consensus 97 ~~~~l~~~Gvd 107 (132)
T TIGR00640 97 DFDELKEMGVA 107 (132)
T ss_pred hHHHHHHCCCC
Confidence 45567788874
No 198
>TIGR02250 FCP1_euk FCP1-like phosphatase, phosphatase domain. This domain is related to domains found in the human NLI interacting factor-like phosphatases, and together both are detected by the Pfam model pfam03031.
Probab=22.27 E-value=1.2e+02 Score=29.23 Aligned_cols=44 Identities=14% Similarity=0.049 Sum_probs=38.7
Q ss_pred ecCCCCcchHHHHHHHhhCCCcEEEEcCCCHHHHHHHHHHccccc
Q 003952 671 FNCPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVT 715 (784)
Q Consensus 671 ~~d~lr~da~~~I~~L~~agi~v~MITGDn~~TA~~VA~~~gI~~ 715 (784)
..-.+||++.+.++.|++. +++.+.|.=....|..+.+.++...
T Consensus 55 ~~v~~rPgv~efL~~l~~~-yel~I~T~~~~~yA~~vl~~ldp~~ 98 (156)
T TIGR02250 55 YLTKLRPFLHEFLKEASKL-YEMHVYTMGTRAYAQAIAKLIDPDG 98 (156)
T ss_pred EEEEECCCHHHHHHHHHhh-cEEEEEeCCcHHHHHHHHHHhCcCC
Confidence 3446799999999999955 9999999999999999999998763
No 199
>cd00860 ThrRS_anticodon ThrRS Threonyl-anticodon binding domain. ThrRS belongs to class II aminoacyl-tRNA synthetases (aaRS). This alignment contains the anticodon binding domain, which is responsible for specificity in tRNA-binding, so that the activated amino acid is transferred to a ribose 3' OH group of the appropriate tRNA only.
Probab=22.22 E-value=1.6e+02 Score=24.66 Aligned_cols=46 Identities=7% Similarity=0.022 Sum_probs=36.2
Q ss_pred EeecCCCCcchHHHHHHHhhCCCcEEE-EcCCCHHHHHHHHHHcccc
Q 003952 669 AVFNCPIREDSAKILSELKNSSQDLAM-ITGDQALTACYVASQVHIV 714 (784)
Q Consensus 669 l~~~d~lr~da~~~I~~L~~agi~v~M-ITGDn~~TA~~VA~~~gI~ 714 (784)
+.+.+..++.+.+..+.|++.|++|.+ ..+.+..--..-|.+.|+.
T Consensus 7 i~~~~~~~~~a~~~~~~Lr~~g~~v~~d~~~~~~~~~~~~a~~~g~~ 53 (91)
T cd00860 7 IPVTDEHLDYAKEVAKKLSDAGIRVEVDLRNEKLGKKIREAQLQKIP 53 (91)
T ss_pred EeeCchHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHcCCC
Confidence 445566788899999999999999988 5666777777778888863
No 200
>COG0637 Predicted phosphatase/phosphohexomutase [General function prediction only]
Probab=22.19 E-value=1.3e+02 Score=30.73 Aligned_cols=50 Identities=16% Similarity=0.134 Sum_probs=43.5
Q ss_pred cCCCCcchHHHHHHHhhCCCcEEEEcCCCHHHHHHHHHHcccccCCcEEE
Q 003952 672 NCPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLIL 721 (784)
Q Consensus 672 ~d~lr~da~~~I~~L~~agi~v~MITGDn~~TA~~VA~~~gI~~~~~~il 721 (784)
..++.|++.+.++.|++.|+.+...|+=....+..+.+..|+.+....+.
T Consensus 84 ~~~~~pGv~~~l~~L~~~~i~~avaS~s~~~~~~~~L~~~gl~~~f~~~v 133 (221)
T COG0637 84 GLKPIPGVVELLEQLKARGIPLAVASSSPRRAAERVLARLGLLDYFDVIV 133 (221)
T ss_pred CCCCCccHHHHHHHHHhcCCcEEEecCChHHHHHHHHHHccChhhcchhc
Confidence 34789999999999999999999999999999999999999986554444
No 201
>PRK14715 DNA polymerase II large subunit; Provisional
Probab=21.90 E-value=59 Score=41.38 Aligned_cols=30 Identities=30% Similarity=0.504 Sum_probs=26.9
Q ss_pred ceEEEEEcCeEEEeecCCCCCCcEEEEcCC
Q 003952 255 QTIMVHRCGKWVKLAGTDLVPGDVVSIGRS 284 (784)
Q Consensus 255 ~~v~V~R~g~~~~I~s~~LvpGDiV~i~~g 284 (784)
..+.|+++|+|.+..+.||.|||.|.|...
T Consensus 988 HPVLv~~~Gk~i~K~A~dlK~GD~vvIPK~ 1017 (1627)
T PRK14715 988 HPVMVYENGKFIKKRAMDVKEGDLMLIPKL 1017 (1627)
T ss_pred CceEEeccCccceeehhhcCcCceeecccc
Confidence 457788999999999999999999999865
No 202
>TIGR03351 PhnX-like phosphonatase-like hydrolase. This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the
Probab=21.74 E-value=4.5e+02 Score=26.23 Aligned_cols=91 Identities=12% Similarity=0.037 Sum_probs=51.1
Q ss_pred chhHHHHHHHHhhccCeEEEEEEEeCCCCChhhHh-hhhhhhccCCcEEEEEEeecC--CCCcchHHHHHHHhhCCCc--
Q 003952 618 PSSYIETYKKYTHQGSRVLALAFKSLPDMTVSDAR-SLHRDEVENGLTFAGFAVFNC--PIREDSAKILSELKNSSQD-- 692 (784)
Q Consensus 618 p~~~~~~~~~~~~~G~Rvlala~k~l~~~~~~~~~-~~~r~~~E~~l~flG~l~~~d--~lr~da~~~I~~L~~agi~-- 692 (784)
.+...+.++.+.++|+++..+.-+. ..... .+.+-.+..+--|-.+++-.+ .-||+..-....+++.|++
T Consensus 89 ~~G~~~~L~~L~~~g~~~~ivT~~~-----~~~~~~~l~~~~l~~~~~f~~i~~~~~~~~~KP~p~~~~~a~~~~~~~~~ 163 (220)
T TIGR03351 89 LPGAEEAFRSLRSSGIKVALTTGFD-----RDTAERLLEKLGWTVGDDVDAVVCPSDVAAGRPAPDLILRAMELTGVQDV 163 (220)
T ss_pred CCCHHHHHHHHHHCCCEEEEEeCCc-----hHHHHHHHHHhhhhhhccCCEEEcCCcCCCCCCCHHHHHHHHHHcCCCCh
Confidence 3455666778888999876655221 11111 112222220011233333333 3466655555566777763
Q ss_pred -EEEEcCCCHHHHHHHHHHcccc
Q 003952 693 -LAMITGDQALTACYVASQVHIV 714 (784)
Q Consensus 693 -v~MITGDn~~TA~~VA~~~gI~ 714 (784)
-++.-||++ +-+.-|+.+|+.
T Consensus 164 ~~~~~igD~~-~Di~aa~~aG~~ 185 (220)
T TIGR03351 164 QSVAVAGDTP-NDLEAGINAGAG 185 (220)
T ss_pred hHeEEeCCCH-HHHHHHHHCCCC
Confidence 366668997 899999999995
No 203
>TIGR02251 HIF-SF_euk Dullard-like phosphatase domain. This domain is related to domains found in FCP1-like phosphatases (TIGR02250), and together both are detected by the Pfam model pfam03031.
Probab=21.60 E-value=1.3e+02 Score=29.06 Aligned_cols=44 Identities=14% Similarity=0.000 Sum_probs=38.7
Q ss_pred eecCCCCcchHHHHHHHhhCCCcEEEEcCCCHHHHHHHHHHcccc
Q 003952 670 VFNCPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIV 714 (784)
Q Consensus 670 ~~~d~lr~da~~~I~~L~~agi~v~MITGDn~~TA~~VA~~~gI~ 714 (784)
.+.=..||++.+.++.|.+. .++++.|--....|..+.+.++..
T Consensus 38 ~~~v~~RPgl~eFL~~l~~~-yei~I~Ts~~~~yA~~il~~ldp~ 81 (162)
T TIGR02251 38 PVYVFKRPHVDEFLERVSKW-YELVIFTASLEEYADPVLDILDRG 81 (162)
T ss_pred EEEEEECCCHHHHHHHHHhc-CEEEEEcCCcHHHHHHHHHHHCcC
Confidence 33446799999999999987 999999999999999999998864
No 204
>KOG4383 consensus Uncharacterized conserved protein [Function unknown]
Probab=21.45 E-value=64 Score=37.97 Aligned_cols=40 Identities=20% Similarity=0.243 Sum_probs=34.7
Q ss_pred EEEEcCeEEEeecCCCCCCcEEEEcCCCCCCCCCCeecceeeEeeCe
Q 003952 258 MVHRCGKWVKLAGTDLVPGDVVSIGRSSGQTGEDKSVPADMLILGGS 304 (784)
Q Consensus 258 ~V~R~g~~~~I~s~~LvpGDiV~i~~ge~d~~~~~~vPaD~ill~G~ 304 (784)
+.+|||+..+++..-||.||||-++||+ .-||.+.=++|+
T Consensus 159 ~afRDGhlm~lP~~LLVeGDiIa~RPGQ-------eafan~~g~~dd 198 (1354)
T KOG4383|consen 159 SAFRDGHLMELPRILLVEGDIIAFRPGQ-------EAFANCEGFDDD 198 (1354)
T ss_pred HHhccCeeeecceeEEEeccEEEecCCc-------cccccccccCCC
Confidence 3479999999999999999999999987 888888776663
No 205
>PRK01045 ispH 4-hydroxy-3-methylbut-2-enyl diphosphate reductase; Reviewed
Probab=21.38 E-value=1e+03 Score=25.61 Aligned_cols=151 Identities=14% Similarity=0.221 Sum_probs=89.8
Q ss_pred eeCCcccCCHHHHHHHhccCccccCCCccccCCCCCcceeEEEEEccCCCCCeeEEEEEECCEEEEEEeCchHHHHHhhc
Q 003952 536 FVDNKLVGDPLEKAALKGIDWSYKSDEKAMPKRGGGNAVQIVQRHHFASHLKRMSVVVRVQEEFFAFVKGAPETIQDRLT 615 (784)
Q Consensus 536 ~~~~~~~gdple~All~~~~~~~~~~~~~~~~~~~~~~~~il~~~~Fss~~krmsviv~~~~~~~~~~KGapE~I~~~~~ 615 (784)
..-|.++.||-...-|+..|-..-.+. +.-...-.|+.+-. |.|..+.+...
T Consensus 34 ytlG~iIHN~~vv~~L~~~GV~~v~~~--------------------~~v~~~~~ViirAH--------Gv~~~~~~~~~ 85 (298)
T PRK01045 34 YVRHEIVHNRYVVERLEKKGAIFVEEL--------------------DEVPDGAIVIFSAH--------GVSPAVREEAK 85 (298)
T ss_pred EEEecCccCHHHHHHHHHCCCEEecCc--------------------ccCCCCCEEEEeCC--------CCCHHHHHHHH
Confidence 456788999999998887664322211 10000114444432 55555554441
Q ss_pred ---------cCc--hhHHHHHHHHhhccCeEEEEEEEeCCCCC----h--hhH---hhh-hhhhcc-CCcEEEEEEeecC
Q 003952 616 ---------DLP--SSYIETYKKYTHQGSRVLALAFKSLPDMT----V--SDA---RSL-HRDEVE-NGLTFAGFAVFNC 673 (784)
Q Consensus 616 ---------~~p--~~~~~~~~~~~~~G~Rvlala~k~l~~~~----~--~~~---~~~-~r~~~E-~~l~flG~l~~~d 673 (784)
+.| ...+...++++++||.++.++-+.=++.. . +.. .+. +-+.++ .+..=++++.=--
T Consensus 86 ~~g~~viDaTCP~V~k~~~~v~~~~~~Gy~vvi~G~~~HpEv~gi~g~~~~~~~vv~~~~e~~~l~~~~~~~v~vvsQTT 165 (298)
T PRK01045 86 ERGLTVIDATCPLVTKVHKEVARMSREGYEIILIGHKGHPEVEGTMGQAPGGVYLVESPEDVAKLEVKDPDKLALVTQTT 165 (298)
T ss_pred HCCCeEEeCCCccchHHHHHHHHHHhCCCEEEEEeCCCCCeeeeeccCcCCCEEEEcCHHHHhhcccCCCCcEEEEEcCC
Confidence 234 35677789999999999999976544210 0 000 000 011111 1224466666556
Q ss_pred CCCcchHHHHHHHhhCCC--------cEEEEcCCCHHHHHHHHHHcccc
Q 003952 674 PIREDSAKILSELKNSSQ--------DLAMITGDQALTACYVASQVHIV 714 (784)
Q Consensus 674 ~lr~da~~~I~~L~~agi--------~v~MITGDn~~TA~~VA~~~gI~ 714 (784)
..+.+..+.++.|++..- .+..-|=+.+..+..+|+++...
T Consensus 166 ~~~~~~~~i~~~l~~~~~~~~v~~~nTIC~aT~~RQ~a~~~La~~vD~m 214 (298)
T PRK01045 166 LSVDDTAEIIAALKERFPEIQGPPKDDICYATQNRQEAVKELAPQADLV 214 (298)
T ss_pred CcHHHHHHHHHHHHHhCcCcccCCCCCcchhhHHHHHHHHHHHhhCCEE
Confidence 667888888888886542 23557889999999999988764
No 206
>PF12017 Tnp_P_element: Transposase protein; InterPro: IPR021896 Protein in this family are transposases found in insects. This region is about 230 amino acids in length and is found associated with PF05485 from PFAM.
Probab=21.29 E-value=1.2e+02 Score=31.63 Aligned_cols=36 Identities=14% Similarity=0.197 Sum_probs=33.6
Q ss_pred HHHHHHHhhCCCcEEEEcCCCHHHHHHHHHHccccc
Q 003952 680 AKILSELKNSSQDLAMITGDQALTACYVASQVHIVT 715 (784)
Q Consensus 680 ~~~I~~L~~agi~v~MITGDn~~TA~~VA~~~gI~~ 715 (784)
++.|+.|+++|+.|+=++-|.-.+=+..-+++||..
T Consensus 199 ~~iI~~l~~~g~~VvAivsD~g~~N~~~w~~Lgi~~ 234 (236)
T PF12017_consen 199 KNIIEKLHEIGYNVVAIVSDMGSNNISLWRELGISE 234 (236)
T ss_pred HHHHHHHHHCCCEEEEEECCCCcchHHHHHHcCCCC
Confidence 578999999999999999999999999999999964
No 207
>COG1011 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=21.13 E-value=2.6e+02 Score=28.10 Aligned_cols=49 Identities=14% Similarity=0.100 Sum_probs=40.0
Q ss_pred cCCCCcchHHHHHHHhhCCCcEEEEcCCCHHHHHHHHHHcccccCCcEEE
Q 003952 672 NCPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLIL 721 (784)
Q Consensus 672 ~d~lr~da~~~I~~L~~agi~v~MITGDn~~TA~~VA~~~gI~~~~~~il 721 (784)
.-++-+++.++++.|++. .++.++|-=....+....+++||.+....++
T Consensus 97 ~~~~~~~~~~~L~~l~~~-~~l~ilTNg~~~~~~~~l~~~gl~~~Fd~v~ 145 (229)
T COG1011 97 LLPDYPEALEALKELGKK-YKLGILTNGARPHQERKLRQLGLLDYFDAVF 145 (229)
T ss_pred hCccChhHHHHHHHHHhh-ccEEEEeCCChHHHHHHHHHcCChhhhheEE
Confidence 346678899999999988 9999999878888899999999776555554
No 208
>TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase. All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509).
Probab=21.03 E-value=3.7e+02 Score=25.83 Aligned_cols=38 Identities=8% Similarity=0.042 Sum_probs=25.6
Q ss_pred CCcchHHHHHHHhhCCC---cEEEEcCCCHHHHHHHHHHcccc
Q 003952 675 IREDSAKILSELKNSSQ---DLAMITGDQALTACYVASQVHIV 714 (784)
Q Consensus 675 lr~da~~~I~~L~~agi---~v~MITGDn~~TA~~VA~~~gI~ 714 (784)
.||+..-....+++.|+ +++|| ||.. .-+.-|+++|+.
T Consensus 141 ~kp~~~~~~~~~~~~~~~~~~~v~I-gD~~-~di~aA~~~G~~ 181 (185)
T TIGR02009 141 GKPHPETFLLAAELLGVSPNECVVF-EDAL-AGVQAARAAGMF 181 (185)
T ss_pred CCCChHHHHHHHHHcCCCHHHeEEE-eCcH-hhHHHHHHCCCe
Confidence 35554333344445554 68888 9995 799999999984
No 209
>TIGR00677 fadh2_euk methylenetetrahydrofolate reductase, eukaryotic type. This protein is an FAD-containing flavoprotein.
Probab=20.92 E-value=2.7e+02 Score=29.73 Aligned_cols=42 Identities=12% Similarity=0.033 Sum_probs=35.0
Q ss_pred CCcEEEEEEeecCCCCcchHHHHHHHhhCCCc-EEEEcCCCHH
Q 003952 661 NGLTFAGFAVFNCPIREDSAKILSELKNSSQD-LAMITGDQAL 702 (784)
Q Consensus 661 ~~l~flG~l~~~d~lr~da~~~I~~L~~agi~-v~MITGDn~~ 702 (784)
.++..+--+...|.=|.+..+.+..++++||+ +..+|||.+.
T Consensus 58 ~g~~~i~Hltcr~~~~~~l~~~L~~~~~~Gi~niLal~GD~p~ 100 (281)
T TIGR00677 58 VGVETCMHLTCTNMPIEMIDDALERAYSNGIQNILALRGDPPH 100 (281)
T ss_pred cCCCeeEEeccCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCC
Confidence 46677777777888788899999999999995 7799999963
No 210
>cd01019 ZnuA Zinc binding protein ZnuA. These proteins have been shown to function as initial receptors in the ABC uptake of Zn2+. They belong to the TroA superfamily of periplasmic metal binding proteins that share a distinct fold and ligand binding mechanism. They are comprised of two globular subdomains connected by a single helix and bind their specific ligands in the cleft between these domains. A typical TroA protein is comprised of two globular subdomains connected by a single helix and can bind the metal ion in the cleft between these domains. In addition, these proteins sometimes have a low complexity region containing a metal-binding histidine-rich motif (repetitive HDH sequence).
Probab=20.62 E-value=2.1e+02 Score=30.57 Aligned_cols=53 Identities=25% Similarity=0.169 Sum_probs=41.9
Q ss_pred CCcEEEEEEeecCCCCcc---hHHHHHHHhhCCCcEEEE-cCCCHHHHHHHHHHccc
Q 003952 661 NGLTFAGFAVFNCPIRED---SAKILSELKNSSQDLAMI-TGDQALTACYVASQVHI 713 (784)
Q Consensus 661 ~~l~flG~l~~~d~lr~d---a~~~I~~L~~agi~v~MI-TGDn~~TA~~VA~~~gI 713 (784)
-++..++++.....-.|. ..++++.+++.+++++.. ++-+..++..+|++.|+
T Consensus 196 ~gl~~~~~~~~~~~~eps~~~l~~l~~~ik~~~v~~If~e~~~~~~~~~~ia~~~g~ 252 (286)
T cd01019 196 YGLTQAGVFTIDPEIDPGAKRLAKIRKEIKEKGATCVFAEPQFHPKIAETLAEGTGA 252 (286)
T ss_pred cCCceeeeecCCCCCCCCHHHHHHHHHHHHHcCCcEEEecCCCChHHHHHHHHhcCc
Confidence 467788887765544444 447889999999998766 77799999999999997
No 211
>TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II. Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related.
Probab=20.35 E-value=1.5e+02 Score=29.36 Aligned_cols=88 Identities=8% Similarity=0.060 Sum_probs=49.2
Q ss_pred hhHHHHHHHHhhccCeEEEEEEEeCCCCChhhHhh-hhhhhccCCcEEEEEEeecC--CCCcchHHHHHHHhhCCCc--E
Q 003952 619 SSYIETYKKYTHQGSRVLALAFKSLPDMTVSDARS-LHRDEVENGLTFAGFAVFNC--PIREDSAKILSELKNSSQD--L 693 (784)
Q Consensus 619 ~~~~~~~~~~~~~G~Rvlala~k~l~~~~~~~~~~-~~r~~~E~~l~flG~l~~~d--~lr~da~~~I~~L~~agi~--v 693 (784)
++..+.++.+.++|+++..+.-. ....... +.+-.+.. -|-+++.-++ .-||+..-....+++.|+. -
T Consensus 95 ~~~~~~L~~L~~~g~~~~i~Sn~-----~~~~~~~~l~~~gl~~--~fd~i~~s~~~~~~KP~~~~~~~~~~~~~~~p~~ 167 (198)
T TIGR01428 95 PDVPAGLRALKERGYRLAILSNG-----SPAMLKSLVKHAGLDD--PFDAVLSADAVRAYKPAPQVYQLALEALGVPPDE 167 (198)
T ss_pred CCHHHHHHHHHHCCCeEEEEeCC-----CHHHHHHHHHHCCChh--hhheeEehhhcCCCCCCHHHHHHHHHHhCCChhh
Confidence 45566778888899998777621 1111111 11111110 1222222211 2377765555566667763 2
Q ss_pred EEEcCCCHHHHHHHHHHcccc
Q 003952 694 AMITGDQALTACYVASQVHIV 714 (784)
Q Consensus 694 ~MITGDn~~TA~~VA~~~gI~ 714 (784)
++.=||++ .-+.-|+++||-
T Consensus 168 ~~~vgD~~-~Di~~A~~~G~~ 187 (198)
T TIGR01428 168 VLFVASNP-WDLGGAKKFGFK 187 (198)
T ss_pred EEEEeCCH-HHHHHHHHCCCc
Confidence 56679998 788889999984
No 212
>cd02072 Glm_B12_BD B12 binding domain of glutamate mutase (Glm). Glutamate mutase catalysis the conversion of (S)-glutamate with (2S,3S)-3-methylaspartate. The rearrangement reaction is initiated by the extraction of a hydrogen from the protein-bound substrate by a 5'-desoxyadenosyl radical, which is generated by the homolytic cleavage of the organometallic bond of the cofactor B12. Glm is a heterotetrameric molecule consisting of two alpha and two epsilon polypeptide chains.
Probab=20.35 E-value=2.6e+02 Score=26.18 Aligned_cols=81 Identities=11% Similarity=0.064 Sum_probs=55.0
Q ss_pred HHhhccCeEEEEEEEeCCCCChhhHhhhhhhhccCCcEEEEEEeecCCCCcchHHHHHHHhhCCC-cE-EEEcCCCH---
Q 003952 627 KYTHQGSRVLALAFKSLPDMTVSDARSLHRDEVENGLTFAGFAVFNCPIREDSAKILSELKNSSQ-DL-AMITGDQA--- 701 (784)
Q Consensus 627 ~~~~~G~Rvlala~k~l~~~~~~~~~~~~r~~~E~~l~flG~l~~~d~lr~da~~~I~~L~~agi-~v-~MITGDn~--- 701 (784)
-+...|+.|+-++...- .+ ..-+...|.+-.++|+-.+.-.=-+..+++++.|+++|+ .+ +|+-|--.
T Consensus 22 ~L~~~GfeVidLG~~v~----~e---~~v~aa~~~~adiVglS~L~t~~~~~~~~~~~~l~~~gl~~v~vivGG~~~i~~ 94 (128)
T cd02072 22 AFTEAGFNVVNLGVLSP----QE---EFIDAAIETDADAILVSSLYGHGEIDCKGLREKCDEAGLKDILLYVGGNLVVGK 94 (128)
T ss_pred HHHHCCCEEEECCCCCC----HH---HHHHHHHHcCCCEEEEeccccCCHHHHHHHHHHHHHCCCCCCeEEEECCCCCCh
Confidence 45678999999985322 12 222233456777888888888888899999999999998 55 55555421
Q ss_pred ---HHHHHHHHHcccc
Q 003952 702 ---LTACYVASQVHIV 714 (784)
Q Consensus 702 ---~TA~~VA~~~gI~ 714 (784)
..-..-.+++|+.
T Consensus 95 ~d~~~~~~~L~~~Gv~ 110 (128)
T cd02072 95 QDFEDVEKRFKEMGFD 110 (128)
T ss_pred hhhHHHHHHHHHcCCC
Confidence 2233557788874
No 213
>PF09926 DUF2158: Uncharacterized small protein (DUF2158); InterPro: IPR019226 This entry represents a family of predominantly prokaryotic proteins with no known function.
Probab=20.33 E-value=82 Score=24.61 Aligned_cols=12 Identities=33% Similarity=0.454 Sum_probs=10.5
Q ss_pred CCCcEEEEcCCC
Q 003952 274 VPGDVVSIGRSS 285 (784)
Q Consensus 274 vpGDiV~i~~ge 285 (784)
.+||+|.++.|.
T Consensus 2 ~~GDvV~LKSGG 13 (53)
T PF09926_consen 2 KIGDVVQLKSGG 13 (53)
T ss_pred CCCCEEEEccCC
Confidence 589999999885
No 214
>PRK11479 hypothetical protein; Provisional
Probab=20.05 E-value=28 Score=36.93 Aligned_cols=19 Identities=26% Similarity=0.466 Sum_probs=16.2
Q ss_pred EEeecCCCCCCcEEEEcCC
Q 003952 266 VKLAGTDLVPGDVVSIGRS 284 (784)
Q Consensus 266 ~~I~s~~LvpGDiV~i~~g 284 (784)
+.|+.++|.|||||....+
T Consensus 58 ~~Vs~~~LqpGDLVFfst~ 76 (274)
T PRK11479 58 KEITAPDLKPGDLLFSSSL 76 (274)
T ss_pred cccChhhCCCCCEEEEecC
Confidence 3789999999999998743
Done!