Query         003952
Match_columns 784
No_of_seqs    440 out of 3076
Neff          7.9 
Searched_HMMs 29240
Date          Mon Mar 25 09:22:31 2013
Command       hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/003952.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/003952hhsearch_pdb -cpu 12 -v 0 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 2zxe_A Na, K-ATPase alpha subu 100.0   7E-81 2.4E-85  768.8  39.4  530  151-715    52-640 (1028)
  2 3ixz_A Potassium-transporting  100.0 5.9E-79   2E-83  752.8  45.0  532  151-715    57-645 (1034)
  3 1mhs_A Proton pump, plasma mem 100.0 1.9E-79 6.4E-84  739.0  31.2  479  164-715    86-576 (920)
  4 3ar4_A Sarcoplasmic/endoplasmi 100.0 7.5E-78 2.6E-82  741.8  45.5  541  151-716     9-645 (995)
  5 3b8c_A ATPase 2, plasma membra 100.0 4.8E-81 1.6E-85  753.4  -3.3  493  151-715    18-529 (885)
  6 3rfu_A Copper efflux ATPase; a 100.0 3.3E-63 1.1E-67  587.7  26.1  438  216-767   185-629 (736)
  7 3j08_A COPA, copper-exporting  100.0 1.4E-62 4.9E-67  578.1  27.1  448  202-767    77-531 (645)
  8 3j09_A COPA, copper-exporting  100.0 1.2E-61   4E-66  577.8  34.7  448  202-767   155-609 (723)
  9 2hc8_A PACS, cation-transporti  99.9 2.9E-26   1E-30  207.9  10.3  110  243-390     2-111 (113)
 10 2kij_A Copper-transporting ATP  99.9 6.1E-25 2.1E-29  202.7  10.5  111  242-390     7-123 (124)
 11 2yj3_A Copper-transporting ATP  99.6 5.2E-20 1.8E-24  193.5   0.0  208  460-768     4-212 (263)
 12 3gwi_A Magnesium-transporting   99.7 8.8E-17   3E-21  156.8  12.6  120  542-674    32-165 (170)
 13 3a1c_A Probable copper-exporti  99.7   1E-16 3.5E-21  170.4  13.8  194  461-714     9-203 (287)
 14 3skx_A Copper-exporting P-type  99.4 4.1E-13 1.4E-17  140.7  13.6  219  472-768     1-219 (280)
 15 4fe3_A Cytosolic 5'-nucleotida  98.9 2.2E-10 7.6E-15  121.9   0.5   97  672-768   139-244 (297)
 16 1svj_A Potassium-transporting   98.7 4.9E-08 1.7E-12   93.1   9.6  138  491-677    13-156 (156)
 17 2kmv_A Copper-transporting ATP  98.1 3.2E-05 1.1E-09   75.9  14.5   54  600-674   132-185 (185)
 18 2arf_A Wilson disease ATPase;   97.0  0.0036 1.2E-07   60.0  10.6   53  600-673   113-165 (165)
 19 3n28_A Phosphoserine phosphata  92.1   0.058   2E-06   57.5   2.7   42  674-715   178-219 (335)
 20 3mmz_A Putative HAD family hyd  90.5    0.15 5.1E-06   48.8   3.5   33  682-714    47-79  (176)
 21 2hsz_A Novel predicted phospha  90.3    0.52 1.8E-05   47.1   7.6   49  673-721   113-161 (243)
 22 1l6r_A Hypothetical protein TA  90.3    0.23 7.9E-06   49.7   4.8   42  673-714    21-62  (227)
 23 3kd3_A Phosphoserine phosphohy  89.2    0.82 2.8E-05   44.0   7.7   40  675-714    83-122 (219)
 24 4gxt_A A conserved functionall  88.2     0.2 6.8E-06   54.6   2.6   42  673-714   220-261 (385)
 25 1k1e_A Deoxy-D-mannose-octulos  87.9    0.37 1.3E-05   46.1   4.1   39  676-714    37-75  (180)
 26 2nyv_A Pgpase, PGP, phosphogly  87.2     1.1 3.6E-05   44.1   7.2   49  673-721    82-130 (222)
 27 2pib_A Phosphorylated carbohyd  87.2    0.79 2.7E-05   43.9   6.1   49  673-721    83-131 (216)
 28 3p96_A Phosphoserine phosphata  87.0    0.23 7.8E-06   54.6   2.2   41  674-714   256-296 (415)
 29 4ex6_A ALNB; modified rossman   86.8    0.65 2.2E-05   45.7   5.4   48  674-721   104-151 (237)
 30 3pct_A Class C acid phosphatas  86.8    0.49 1.7E-05   48.4   4.4   82  672-769    99-188 (260)
 31 3fvv_A Uncharacterized protein  86.2    0.55 1.9E-05   46.2   4.4   41  674-714    92-132 (232)
 32 1nnl_A L-3-phosphoserine phosp  85.9     0.5 1.7E-05   46.4   3.9   42  673-714    85-126 (225)
 33 3ocu_A Lipoprotein E; hydrolas  85.9    0.42 1.4E-05   49.0   3.3   82  672-769    99-188 (262)
 34 4ap9_A Phosphoserine phosphata  84.8    0.17 5.8E-06   48.4  -0.2   85  674-767    79-163 (201)
 35 3s6j_A Hydrolase, haloacid deh  84.4       1 3.4E-05   44.0   5.3   48  674-721    91-138 (233)
 36 3n07_A 3-deoxy-D-manno-octulos  84.4    0.45 1.6E-05   46.4   2.7   34  681-714    59-92  (195)
 37 3m9l_A Hydrolase, haloacid deh  84.3     1.5 5.3E-05   42.0   6.6   44  674-717    70-113 (205)
 38 3e58_A Putative beta-phosphogl  84.2       1 3.5E-05   43.0   5.3   48  674-721    89-136 (214)
 39 2wm8_A MDP-1, magnesium-depend  83.8       1 3.4E-05   43.1   4.9   43  674-716    68-111 (187)
 40 3mc1_A Predicted phosphatase,   83.4    0.78 2.7E-05   44.7   4.0   49  673-721    85-133 (226)
 41 2p9j_A Hypothetical protein AQ  83.2    0.95 3.2E-05   42.0   4.3   40  675-714    37-76  (162)
 42 2no4_A (S)-2-haloacid dehaloge  83.1     1.5 5.2E-05   43.2   6.1   48  674-721   105-152 (240)
 43 3kzx_A HAD-superfamily hydrola  83.0     1.6 5.4E-05   42.7   6.1   48  674-721   103-150 (231)
 44 3sd7_A Putative phosphatase; s  82.3     1.5 5.3E-05   43.1   5.8   49  673-721   109-157 (240)
 45 3um9_A Haloacid dehalogenase,   82.1     1.8 6.1E-05   42.1   6.1   49  673-721    95-143 (230)
 46 3mn1_A Probable YRBI family ph  82.0    0.95 3.2E-05   43.6   3.9   33  682-714    54-86  (189)
 47 1zrn_A L-2-haloacid dehalogena  81.9     1.4 4.9E-05   43.0   5.3   48  674-721    95-142 (232)
 48 3nuq_A Protein SSM1, putative   81.2     1.8 6.2E-05   44.0   6.0   49  673-721   141-191 (282)
 49 1te2_A Putative phosphatase; s  81.2     2.1 7.1E-05   41.2   6.2   48  674-721    94-141 (226)
 50 4eze_A Haloacid dehalogenase-l  80.2       1 3.5E-05   47.5   3.7   42  674-715   179-220 (317)
 51 3umb_A Dehalogenase-like hydro  79.2     2.2 7.5E-05   41.5   5.6   49  673-721    98-146 (233)
 52 3kbb_A Phosphorylated carbohyd  79.1     2.6   9E-05   40.7   6.1   48  674-721    84-131 (216)
 53 3iru_A Phoshonoacetaldehyde hy  78.9     3.9 0.00013   40.9   7.6   48  674-721   111-159 (277)
 54 3ij5_A 3-deoxy-D-manno-octulos  78.9     1.4 4.7E-05   43.5   3.9   33  682-714    84-116 (211)
 55 3e8m_A Acylneuraminate cytidyl  78.5     1.6 5.6E-05   40.4   4.2   33  682-714    39-71  (164)
 56 2hcf_A Hydrolase, haloacid deh  77.5     3.2 0.00011   40.3   6.3   43  674-716    93-136 (234)
 57 2fi1_A Hydrolase, haloacid deh  77.3     5.1 0.00017   37.5   7.4   80  675-768    83-166 (190)
 58 2obb_A Hypothetical protein; s  76.9     2.5 8.5E-05   39.0   4.8   40  675-714    25-67  (142)
 59 3ib6_A Uncharacterized protein  76.9     3.1  0.0001   39.7   5.7   49  673-721    33-84  (189)
 60 3d6j_A Putative haloacid dehal  76.1     4.6 0.00016   38.6   6.9   47  675-721    90-136 (225)
 61 2go7_A Hydrolase, haloacid deh  75.7     3.8 0.00013   38.5   6.1   42  674-716    85-126 (207)
 62 2hdo_A Phosphoglycolate phosph  75.2     3.5 0.00012   39.4   5.7   47  674-721    83-129 (209)
 63 2hi0_A Putative phosphoglycola  75.0     3.5 0.00012   40.7   5.8   46  675-721   111-156 (240)
 64 3n1u_A Hydrolase, HAD superfam  74.7     1.3 4.4E-05   42.8   2.3   33  682-714    54-86  (191)
 65 3m1y_A Phosphoserine phosphata  74.5     1.8   6E-05   41.8   3.3   44  673-716    74-117 (217)
 66 2pr7_A Haloacid dehalogenase/e  73.7     1.9 6.6E-05   38.1   3.2   48  674-721    18-65  (137)
 67 2ah5_A COG0546: predicted phos  72.8     4.5 0.00016   39.0   5.9   47  674-721    84-130 (210)
 68 3dv9_A Beta-phosphoglucomutase  72.6     2.9 9.8E-05   41.0   4.4   44  673-717   107-150 (247)
 69 3nas_A Beta-PGM, beta-phosphog  71.6     2.9  0.0001   40.7   4.2   46  674-721    92-137 (233)
 70 2gmw_A D,D-heptose 1,7-bisphos  71.3       4 0.00014   39.8   5.0   42  673-714    49-105 (211)
 71 1l7m_A Phosphoserine phosphata  71.3     2.4 8.1E-05   40.4   3.4   42  673-714    75-116 (211)
 72 2r8e_A 3-deoxy-D-manno-octulos  70.9       3  0.0001   39.9   4.0   34  681-714    60-93  (188)
 73 2fea_A 2-hydroxy-3-keto-5-meth  69.6     2.1 7.3E-05   42.4   2.6   42  673-716    76-117 (236)
 74 3nvb_A Uncharacterized protein  69.4     4.3 0.00015   43.9   5.1   79  619-710   208-292 (387)
 75 1wr8_A Phosphoglycolate phosph  69.4     4.3 0.00015   40.1   4.9   41  674-714    20-60  (231)
 76 2w43_A Hypothetical 2-haloalka  69.3     4.3 0.00015   38.6   4.7   81  673-768    73-157 (201)
 77 1rku_A Homoserine kinase; phos  69.2     3.5 0.00012   39.5   4.0   42  673-715    68-109 (206)
 78 3qxg_A Inorganic pyrophosphata  69.1     6.9 0.00024   38.4   6.3   44  673-717   108-151 (243)
 79 2fpr_A Histidine biosynthesis   66.8     3.9 0.00013   38.7   3.7   42  673-714    41-97  (176)
 80 1qq5_A Protein (L-2-haloacid d  66.6     7.5 0.00026   38.5   6.1   47  673-721    92-138 (253)
 81 2o2x_A Hypothetical protein; s  66.5     4.2 0.00014   39.7   4.0   42  673-714    55-111 (218)
 82 3l8h_A Putative haloacid dehal  66.4     5.2 0.00018   37.4   4.5   39  674-712    27-80  (179)
 83 2wf7_A Beta-PGM, beta-phosphog  65.8     4.5 0.00015   38.7   4.1   45  674-720    91-135 (221)
 84 3qnm_A Haloacid dehalogenase-l  64.8     5.6 0.00019   38.5   4.6   47  674-721   107-153 (240)
 85 3ewi_A N-acylneuraminate cytid  64.7     1.6 5.6E-05   41.3   0.5   44  662-713    30-75  (168)
 86 1xvi_A MPGP, YEDP, putative ma  62.7     8.3 0.00028   39.2   5.6   40  675-714    27-66  (275)
 87 3ed5_A YFNB; APC60080, bacillu  62.5     8.3 0.00028   37.3   5.4   48  673-721   102-149 (238)
 88 3l5k_A Protein GS1, haloacid d  61.5      14 0.00047   36.3   6.9   44  673-716   111-155 (250)
 89 3pdw_A Uncharacterized hydrola  61.4       7 0.00024   39.2   4.7   40  675-714    23-65  (266)
 90 1rkq_A Hypothetical protein YI  60.9     6.1 0.00021   40.4   4.2   41  674-714    22-62  (282)
 91 3qgm_A P-nitrophenyl phosphata  60.8     3.8 0.00013   41.2   2.6   43  672-714    22-67  (268)
 92 2hoq_A Putative HAD-hydrolase   60.2     9.5 0.00033   37.3   5.4   48  674-721    94-141 (241)
 93 2zos_A MPGP, mannosyl-3-phosph  60.1     4.4 0.00015   40.6   2.8   38  677-714    20-57  (249)
 94 3cnh_A Hydrolase family protei  59.5      11 0.00037   35.6   5.5   47  674-721    86-132 (200)
 95 2pq0_A Hypothetical conserved   59.3       6 0.00021   39.5   3.8   40  674-713    20-59  (258)
 96 3epr_A Hydrolase, haloacid deh  58.6     5.4 0.00019   40.1   3.3   40  674-714    22-64  (264)
 97 2zg6_A Putative uncharacterize  58.4     6.6 0.00022   38.1   3.7   47  674-721    95-141 (220)
 98 2i7d_A 5'(3')-deoxyribonucleot  57.2     3.1 0.00011   39.8   1.1   41  673-713    72-113 (193)
 99 3pgv_A Haloacid dehalogenase-l  57.0     7.5 0.00026   39.6   4.1   42  673-714    37-78  (285)
100 2qlt_A (DL)-glycerol-3-phospha  56.6      15 0.00053   36.9   6.3   41  674-714   114-155 (275)
101 2b30_A Pvivax hypothetical pro  55.8     7.9 0.00027   40.1   4.0   42  673-714    44-88  (301)
102 2om6_A Probable phosphoserine   54.4      16 0.00055   35.0   5.9   47  675-721   100-149 (235)
103 2i33_A Acid phosphatase; HAD s  53.5      11 0.00037   38.3   4.5   50  673-722   100-154 (258)
104 4eek_A Beta-phosphoglucomutase  53.5     9.7 0.00033   37.7   4.1   43  673-715   109-151 (259)
105 4dw8_A Haloacid dehalogenase-l  53.1      14 0.00048   37.1   5.4   42  673-714    21-62  (279)
106 1qyi_A ZR25, hypothetical prot  53.0     9.9 0.00034   41.0   4.3   44  673-716   214-257 (384)
107 2jmz_A Hypothetical protein MJ  52.7      14 0.00047   35.5   4.9   32  254-285   102-133 (186)
108 2p11_A Hypothetical protein; p  52.3     8.4 0.00029   37.6   3.4   42  673-715    95-136 (231)
109 1nf2_A Phosphatase; structural  50.0      15 0.00051   37.0   4.9   40  674-714    19-58  (268)
110 3ddh_A Putative haloacid dehal  49.4      16 0.00054   34.9   4.8   48  674-721   105-153 (234)
111 3dnp_A Stress response protein  48.3      17 0.00058   36.8   5.1   41  674-714    23-63  (290)
112 1nrw_A Hypothetical protein, h  47.7      16 0.00055   37.2   4.8   42  673-714    20-61  (288)
113 3mpo_A Predicted hydrolase of   47.2      17 0.00058   36.5   4.9   42  673-714    21-62  (279)
114 2pr7_A Haloacid dehalogenase/e  47.0      87   0.003   26.8   9.1   87  620-714    22-113 (137)
115 4as2_A Phosphorylcholine phosp  46.6     7.8 0.00027   40.9   2.1   39  673-711   142-180 (327)
116 3dao_A Putative phosphatse; st  44.8      17 0.00057   36.9   4.3   41  674-714    39-79  (283)
117 2oda_A Hypothetical protein ps  44.3      15 0.00053   35.1   3.8   37  673-709    35-71  (196)
118 3kc2_A Uncharacterized protein  43.6      13 0.00044   39.6   3.3   51  671-721    26-80  (352)
119 2gfh_A Haloacid dehalogenase-l  43.5      26  0.0009   34.9   5.5   47  674-721   121-167 (260)
120 1xpj_A Hypothetical protein; s  42.3      14 0.00049   32.6   3.0   29  674-702    24-52  (126)
121 3n28_A Phosphoserine phosphata  42.2      20  0.0007   37.3   4.6   49  667-715    36-95  (335)
122 1vjr_A 4-nitrophenylphosphatas  42.2      13 0.00044   37.2   2.9   42  673-714    32-76  (271)
123 1q92_A 5(3)-deoxyribonucleotid  41.9     7.2 0.00025   37.3   0.9   42  673-714    74-116 (197)
124 1swv_A Phosphonoacetaldehyde h  41.0      22 0.00077   35.0   4.5   42  674-715   103-144 (267)
125 2lcj_A PAB POLC intein; hydrol  40.6      30   0.001   33.0   5.1   33  253-285    91-123 (185)
126 1yns_A E-1 enzyme; hydrolase f  40.6      37  0.0013   34.0   6.1   49  673-721   129-180 (261)
127 2pke_A Haloacid delahogenase-l  40.3      32  0.0011   33.6   5.5   46  674-720   112-157 (251)
128 1y8a_A Hypothetical protein AF  40.2      18 0.00062   37.7   3.8   40  674-714   103-142 (332)
129 2i6x_A Hydrolase, haloacid deh  40.2      16 0.00056   34.5   3.2   46  674-720    89-140 (211)
130 3kbb_A Phosphorylated carbohyd  37.1      65  0.0022   30.4   7.1   86  620-714    88-179 (216)
131 3u26_A PF00702 domain protein;  35.2      48  0.0016   31.5   5.8   47  674-721   100-146 (234)
132 1at0_A 17-hedgehog; developmen  35.0      95  0.0033   28.2   7.4   31  254-284    71-103 (145)
133 3f9r_A Phosphomannomutase; try  34.1      34  0.0012   34.0   4.6   37  674-713    21-57  (246)
134 3k1z_A Haloacid dehalogenase-l  33.6      31  0.0011   34.2   4.2   46  674-720   106-151 (263)
135 2b0c_A Putative phosphatase; a  33.1     5.1 0.00017   38.0  -1.8   42  674-715    91-133 (206)
136 1zjj_A Hypothetical protein PH  32.5      20 0.00069   35.8   2.6   38  677-714    20-60  (263)
137 4gib_A Beta-phosphoglucomutase  31.5      65  0.0022   31.6   6.2   47  673-721   115-161 (250)
138 1ltq_A Polynucleotide kinase;   30.9      25 0.00085   35.9   3.0   34  670-703   184-217 (301)
139 3zvl_A Bifunctional polynucleo  29.8      35  0.0012   37.0   4.0   40  675-714    88-139 (416)
140 4g9b_A Beta-PGM, beta-phosphog  29.5      81  0.0028   30.7   6.4   46  674-721    95-140 (243)
141 1ccw_A Protein (glutamate muta  29.3      54  0.0018   29.5   4.6   82  626-714    25-114 (137)
142 3um9_A Haloacid dehalogenase,   28.9 1.4E+02  0.0049   27.9   8.1   87  619-714    99-191 (230)
143 1rlm_A Phosphatase; HAD family  28.3      21 0.00073   35.8   1.8   40  674-713    20-60  (271)
144 2oyc_A PLP phosphatase, pyrido  28.0      30   0.001   35.4   2.9   42  673-714    36-80  (306)
145 3fzq_A Putative hydrolase; YP_  27.7      25 0.00085   35.0   2.2   41  674-714    22-62  (274)
146 3umb_A Dehalogenase-like hydro  26.6 1.5E+02  0.0051   27.9   7.7   87  619-714   102-194 (233)
147 3zx4_A MPGP, mannosyl-3-phosph  26.5      41  0.0014   33.3   3.6   36  674-713    16-51  (259)
148 2q5c_A NTRC family transcripti  26.1 1.6E+02  0.0055   28.1   7.6   81  620-714    82-162 (196)
149 4dcc_A Putative haloacid dehal  26.1      50  0.0017   31.6   4.1   42  674-716   112-159 (229)
150 2hx1_A Predicted sugar phospha  26.0      34  0.0012   34.4   2.9   42  673-714    29-73  (284)
151 1zrn_A L-2-haloacid dehalogena  25.9 1.7E+02  0.0058   27.6   8.0   86  620-714    99-190 (232)
152 4g9b_A Beta-PGM, beta-phosphog  25.8      84  0.0029   30.6   5.8   86  619-714    98-188 (243)
153 2rbk_A Putative uncharacterize  25.3      18 0.00061   36.1   0.6   37  675-712    21-57  (261)
154 3p6l_A Sugar phosphate isomera  25.0 2.7E+02  0.0092   27.1   9.6   95  620-714    23-130 (262)
155 3l7y_A Putative uncharacterize  23.9      36  0.0012   34.7   2.7   39  675-713    55-94  (304)
156 1u02_A Trehalose-6-phosphate p  23.8      36  0.0012   33.5   2.6   37  674-711    23-59  (239)
157 3umg_A Haloacid dehalogenase;   23.2      57   0.002   31.3   3.9   40  674-714   116-155 (254)
158 2no4_A (S)-2-haloacid dehaloge  23.1   2E+02   0.007   27.2   8.0   87  619-714   108-200 (240)
159 2hhl_A CTD small phosphatase-l  22.6      62  0.0021   31.0   3.9   43  673-716    67-109 (195)
160 3fst_A 5,10-methylenetetrahydr  22.4   1E+02  0.0035   31.8   5.7   83  621-703    41-124 (304)
161 4gib_A Beta-phosphoglucomutase  21.5 1.2E+02  0.0042   29.5   6.0   86  619-714   119-209 (250)
162 2b82_A APHA, class B acid phos  21.1      35  0.0012   33.1   1.7   32  675-706    89-120 (211)
163 2l82_A Designed protein OR32;   21.1 1.1E+02  0.0037   26.2   4.5   18  622-639    16-33  (162)
164 2i2x_B MTAC, methyltransferase  21.0      97  0.0033   31.1   5.1   80  626-713   145-224 (258)
165 2ght_A Carboxy-terminal domain  21.0      70  0.0024   30.1   3.8   41  674-715    55-95  (181)
166 1s2o_A SPP, sucrose-phosphatas  20.8      65  0.0022   31.6   3.8   37  677-714    22-58  (244)
167 2yxb_A Coenzyme B12-dependent   20.7      77  0.0026   29.3   4.0   81  626-714    40-123 (161)
168 2pib_A Phosphorylated carbohyd  20.7 2.1E+02  0.0073   26.0   7.4   87  619-714    87-179 (216)
169 3kzx_A HAD-superfamily hydrola  20.7 3.4E+02   0.012   25.3   9.0   86  620-714   107-199 (231)
170 2x4d_A HLHPP, phospholysine ph  20.6      96  0.0033   30.1   5.0   40  675-714    33-75  (271)
171 3smv_A S-(-)-azetidine-2-carbo  20.5      65  0.0022   30.5   3.6   39  673-712    98-136 (240)

No 1  
>2zxe_A Na, K-ATPase alpha subunit; membrane protein, ION pump, ATPase, K+ binding, haloacid dehydrogenease superfamily, phosphate analogue; HET: CLR NAG NDG; 2.40A {Squalus acanthias} PDB: 3a3y_A* 3b8e_A* 3kdp_A* 3n2f_A* 3n23_A* 1mo7_A 1mo8_A* 1q3i_A
Probab=100.00  E-value=7e-81  Score=768.75  Aligned_cols=530  Identities=22%  Similarity=0.265  Sum_probs=415.3

Q ss_pred             CCchhhhhhhhc-CCCCCHHHHHHHHhcCCCCccCCCC-ccHHHHHHHHhhhhHHHHHHHhhhh----cccc--------
Q 003952          151 PTKETFGYYLKC-TGHSTEAKIAVATEKWGRNVFEYPQ-PTFQKLMKENCMEPFFVFQVFCVGL----WCLD--------  216 (784)
Q Consensus       151 ~~~~~~~~~~~~-~g~l~~~~v~~~~~~yG~N~~~~~~-~s~~~ll~~~~~~pf~vfqi~~~~l----w~l~--------  216 (784)
                      +.++.++.+.++ ..|||++|+++|+++||+|+++.++ +++|.+|.+++.+||.++++++.++    |.++        
T Consensus        52 ~~~~~~~~l~t~~~~GLs~~e~~~r~~~~G~N~l~~~~~~~~~~~~~~~~~~~~~~iL~~aa~ls~~~~~~~~~~~~~~~  131 (1028)
T 2zxe_A           52 SLDELHNKYGTDLTRGLTNARAKEILARDGPNSLTPPPTTPEWIKFCRQLFGGFSILLWIGAILCFLAYGIQAATEDEPA  131 (1028)
T ss_dssp             CHHHHHHHHTCCSSSCBCHHHHHHHHHHHCCSCCCCCCCCCHHHHHHTTTTSTHHHHHHHHHHHHHHHHHHHHHSSCCCC
T ss_pred             CHHHHHHHhCcCccCCCCHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHhHHHHHHHHHHHHHHHHHHhhcccccccc
Confidence            345567777765 3578999999999999999999874 6999999999999998887766544    3322        


Q ss_pred             -hhhhhHHHHHHHHHHHHHHHHHHHHHH---HHHHHhhhhCCceEEEEEcCeEEEeecCCCCCCcEEEEcCCCCCCCCCC
Q 003952          217 -EYWYYSLFTLFMLFMFESTMAKSRLKT---LTEIRRVRVDNQTIMVHRCGKWVKLAGTDLVPGDVVSIGRSSGQTGEDK  292 (784)
Q Consensus       217 -~y~~~~~~~l~~l~~~~~~~~~~~~~~---~~~l~~~~~~~~~v~V~R~g~~~~I~s~~LvpGDiV~i~~ge~d~~~~~  292 (784)
                       ++|++++++++++++......+|+.|+   +++|++|  .|..++|+|||++++|+++||+|||+|.|++|+       
T Consensus       132 ~~~~~~~~~i~~vv~i~~~~~~~qe~ka~~~~~~L~~l--~~~~a~V~Rdg~~~~I~~~~Lv~GDiV~l~~Gd-------  202 (1028)
T 2zxe_A          132 NDNLYLGVVLSTVVIVTGCFSYYQEAKSSRIMDSFKNM--VPQQALVIRDGEKSTINAEFVVAGDLVEVKGGD-------  202 (1028)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHHTCCCCCHHHHHHTT--SCSEEEEEETTEEEEEEGGGCCTTCEEEEETTC-------
T ss_pred             cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh--CCCeeEEEECCEEEEEEHHHCCcCCEEEECCCC-------
Confidence             356666666666665555666666554   4455555  478899999999999999999999999999887       


Q ss_pred             eecceeeEeeCe-eEeeccCCCCCCcceeeccccCCCCccccccccCCCeeEEeeeeEeecCCCCCcCCCCCCCceEEEE
Q 003952          293 SVPADMLILGGS-AIVNEAILTGESTPQWKVSIMGRETGEKLSARRDKSHVLFGGTKILQHTPDKTFPLKTPDGGCLAVV  371 (784)
Q Consensus       293 ~vPaD~ill~G~-~~VdES~LTGES~Pv~K~~~~~~~~~~~~~~~~~~~~~lf~GT~v~~~~~~~~~~~~~~~g~~~~~V  371 (784)
                      +|||||+|++|+ |.||||+|||||.|+.|.+.+..+  +.+    ++.|++|+||.|.             +|.+.++|
T Consensus       203 ~IPaD~~ll~g~~~~VdeS~LTGES~pv~K~~~~~~~--~~~----~~~n~v~~GT~v~-------------~G~~~~~V  263 (1028)
T 2zxe_A          203 RIPADLRIISAHGCKVDNSSLTGESEPQTRSPEFSSE--NPL----ETRNIAFFSTNCV-------------EGTARGVV  263 (1028)
T ss_dssp             BCCSEEEEEEEEEEEEECHHHHSCCSCEECCSSCCCS--STT----TCSSEECTTCEEE-------------EEEEEEEE
T ss_pred             EeeceEEEEeeCcEEEEcCccCCCCcceecccCCCCC--Ccc----cccceEEeCceEE-------------cceEEEEE
Confidence            999999999995 899999999999999998743221  122    4688999999999             79999999


Q ss_pred             EeeccccchhHHHHHhcccccccccchhHHHHHHHHHHHHHHHHhhheeecCcCCccchhHHHHHHHHhhhhcccCCcch
Q 003952          372 LRTGFETSQGKLMRTILFSTERVTANSWESGLFILFLVVFAVIAAGYVLKKGMEDPTRSKYKLFLSCSLIITSVIPPELP  451 (784)
Q Consensus       372 ~~TG~~T~~gkl~~~i~~~~~~~~~~~~~~~~fi~~ll~~aii~~~~~~~~~~~~~~~~~~~~~l~~i~ii~~~vP~~Lp  451 (784)
                      ++||.+|..|++++++..++.+.++.++....|..+++.++++.++.++..++. ...++...+..++.+++++||++||
T Consensus       264 ~~tG~~T~~g~i~~~~~~~~~~~t~lq~~~~~~~~~l~~~~l~~~~~~~~~~~~-~~~~~~~~~~~~i~llv~~iP~~Lp  342 (1028)
T 2zxe_A          264 VYTGDRTVMGRIATLASGLEVGRTPIAIEIEHFIHIITGVAVFLGVSFFILSLI-LGYSWLEAVIFLIGIIVANVPEGLL  342 (1028)
T ss_dssp             EECGGGSHHHHHHHHHHHSCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-TTCCHHHHHHHHHHHHHHHSCTTHH
T ss_pred             EEeccccHHHHHHHhccCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-ccCcHHHHHHHHHHHHHHHcCchHH
Confidence            999999999999999998888889888887777666555544333222211110 0123556677788889999999999


Q ss_pred             HHHHHHHHHHHHHHHhcCceecCCCCcCcCCceeEEEecccCcccCCceEEEEEEecCCC---c-ccc----CCCCCc--
Q 003952          452 MELSIAVNTSLIALARRGIFCTEPFRIPFAGKVDMCCFDKTGTLTSDDMEFRGVVGLSNA---E-LED----DMTKVP--  521 (784)
Q Consensus       452 ~~lslav~~s~~~l~k~~I~~~~~~~ie~lG~vd~icfDKTGTLT~~~m~v~~i~~~~~~---~-~~~----~~~~~~--  521 (784)
                      ++++++++.+..+|+|+|++|+++.++|.+|++|++|||||||||+|+|+|.+++..+..   + ...    ......  
T Consensus       343 ~~vti~l~~~~~~mak~~ilvk~~~avE~Lg~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  422 (1028)
T 2zxe_A          343 ATVTVCLTLTAKRMARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHMWFDNQIHEADTTENQSGAAFDKTSAT  422 (1028)
T ss_dssp             HHHHHHHHHHHHHHHTTTEEESSTTHHHHHHHCCEEEECCCCCCBCSSCEEEEEEETTEEEECCCCTTCCSCCCCSSCHH
T ss_pred             HHHHHHHHHHHHHHhhCCceeccchHhhhhcCceEEeccCCCCCCCCeEEEEEEEECCeeeeccCCCCccccccccCCHH
Confidence            999999999999999999999999999999999999999999999999999998754211   0 000    000011  


Q ss_pred             -HHHHHHHHhccceEeeCC---------cccCCHHHHHHHhccCccccCCCccccCCCCCcceeEEEEEccCCCCCeeEE
Q 003952          522 -VRTQEILASCHALVFVDN---------KLVGDPLEKAALKGIDWSYKSDEKAMPKRGGGNAVQIVQRHHFASHLKRMSV  591 (784)
Q Consensus       522 -~~~~~~la~chsl~~~~~---------~~~gdple~All~~~~~~~~~~~~~~~~~~~~~~~~il~~~~Fss~~krmsv  591 (784)
                       .....+++.||+.....+         ...|||+|.|+++++.+.....      .+....+++++.+||+|++|||++
T Consensus       423 ~~~l~~~~alc~~~~~~~~~~~hp~~~~~~~gdp~E~Al~~~a~~~~~~~------~~~~~~~~~~~~~pF~s~rk~msv  496 (1028)
T 2zxe_A          423 WSALSRIAALCNRAVFQAGQDNVPILKRSVAGDASESALLKCIELCCGSV------QGMRDRNPKIVEIPFNSTNKYQLS  496 (1028)
T ss_dssp             HHHHHHHHHHSCCCEECTTCTTSCGGGSCEESCHHHHHHHHHHHHHHSCH------HHHHHHSCEEEEECCCTTTCEEEE
T ss_pred             HHHHHHHHHhcCCCeeecCCCCCccccceeCCCchHHHHHHHHHHhCCCH------HHHHHhCceEEEeccCcccceEEE
Confidence             144567788998765421         2579999999999875431100      001134778999999999999999


Q ss_pred             EEEE----CCEEEEEEeCchHHHHHhhccC-------------chhHHHHHHHHhhccCeEEEEEEEeCCCCChhhHhhh
Q 003952          592 VVRV----QEEFFAFVKGAPETIQDRLTDL-------------PSSYIETYKKYTHQGSRVLALAFKSLPDMTVSDARSL  654 (784)
Q Consensus       592 iv~~----~~~~~~~~KGapE~I~~~~~~~-------------p~~~~~~~~~~~~~G~Rvlala~k~l~~~~~~~~~~~  654 (784)
                      +++.    ++++++++|||||.|.++|...             ++.+.+.+++|+++|+|||++|||++++.+..+....
T Consensus       497 i~~~~~~~~~~~~~~~KGA~e~il~~c~~~~~~g~~~~l~~~~~~~~~~~~~~~a~~G~RvL~~A~~~l~~~~~~~~~~~  576 (1028)
T 2zxe_A          497 IHENEKSSESRYLLVMKGAPERILDRCSTILLNGAEEPLKEDMKEAFQNAYLELGGLGERVLGFCHFALPEDKYNEGYPF  576 (1028)
T ss_dssp             EEECSCTTTCCEEEEEEECHHHHHTTEEEECBTTBCCBCCHHHHHHHHHHHHHHHHTTCEEEEEEEEECCSTTSCTTCCC
T ss_pred             EEeccCCCCCcEEEEEeCCcHHHHHHhhhhhcCCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEEEEecCcccccccccc
Confidence            9986    3567899999999999999531             2456778899999999999999999965322111111


Q ss_pred             h---hhhccCCcEEEEEEeecCCCCcchHHHHHHHhhCCCcEEEEcCCCHHHHHHHHHHccccc
Q 003952          655 H---RDEVENGLTFAGFAVFNCPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVT  715 (784)
Q Consensus       655 ~---r~~~E~~l~flG~l~~~d~lr~da~~~I~~L~~agi~v~MITGDn~~TA~~VA~~~gI~~  715 (784)
                      +   .+..|+|++|+|+++++||+|||++++|++|+++||+++|+||||+.||.+||++|||..
T Consensus       577 ~~~~~~~~e~~l~~lG~i~i~Dplr~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lgi~~  640 (1028)
T 2zxe_A          577 DADEPNFPTTDLCFVGLMAMIDPPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKGVGIIS  640 (1028)
T ss_dssp             CTTTTCSCCSSEEEEEEEEEECCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTSSC
T ss_pred             chhhhhhhhcCeEEEeeeccCCCCChhHHHHHHHHHHcCCEEEEECCCCHHHHHHHHHHcCCCC
Confidence            1   234589999999999999999999999999999999999999999999999999999984


No 2  
>3ixz_A Potassium-transporting ATPase alpha; ION pump, H+, K+-ATPase, P-type ATPase, membrane protein, hydrolase, aluminium fluoride, ATP-binding; 6.50A {Sus scrofa} PDB: 2yn9_A 2xzb_A 1iwc_A 1iwf_A
Probab=100.00  E-value=5.9e-79  Score=752.83  Aligned_cols=532  Identities=20%  Similarity=0.237  Sum_probs=419.1

Q ss_pred             CCchhhhhhhhcC-CCCCHHHHHHHHhcCCCCccCCCC-ccHHHHHHHHhhhhHHHHHHHhhhhccc-------------
Q 003952          151 PTKETFGYYLKCT-GHSTEAKIAVATEKWGRNVFEYPQ-PTFQKLMKENCMEPFFVFQVFCVGLWCL-------------  215 (784)
Q Consensus       151 ~~~~~~~~~~~~~-g~l~~~~v~~~~~~yG~N~~~~~~-~s~~~ll~~~~~~pf~vfqi~~~~lw~l-------------  215 (784)
                      +.++.++.+.++. .|||++|+++|+++||+|+++.++ +++|..|.+++.+||.++++++.++.++             
T Consensus        57 ~~~~~~~~l~~~~~~GLs~~ea~~rl~~~G~N~l~~~~~~~~~~~~~~q~~~~~~~il~~aa~~~~~~~~~~~~~~~~~~  136 (1034)
T 3ixz_A           57 SVAELEQKYQTSATKGLSASLAAELLLRDGPNALRPPRGTPEYVKFARQLAGGLQCLMWVAAAICLIAFAIQASEGDLTT  136 (1034)
T ss_pred             CHHHHHHHhCCCcccCCCHHHHHHHHHhhCCCCCCCCCCCCHHHHHHHHHhChHHHHHHHHHHHHHHHHHHhhccCCCcc
Confidence            3556778887764 578999999999999999998776 5899999999999998777655444321             


Q ss_pred             chhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh-CCceEEEEEcCeEEEeecCCCCCCcEEEEcCCCCCCCCCCee
Q 003952          216 DEYWYYSLFTLFMLFMFESTMAKSRLKTLTEIRRVRV-DNQTIMVHRCGKWVKLAGTDLVPGDVVSIGRSSGQTGEDKSV  294 (784)
Q Consensus       216 ~~y~~~~~~~l~~l~~~~~~~~~~~~~~~~~l~~~~~-~~~~v~V~R~g~~~~I~s~~LvpGDiV~i~~ge~d~~~~~~v  294 (784)
                      .++|++++++++++++......+|..|+.+.++++.. .+..++|+|||++++|+++||||||+|.|++|+       +|
T Consensus       137 ~~~~~~~~~i~~vv~i~~~~~~~qe~ka~~al~~L~~l~~~~a~ViRdG~~~~I~~~eLv~GDiV~l~~Gd-------~V  209 (1034)
T 3ixz_A          137 DDNLYLALALIAVVVVTGCFGYYQEFKSTNIIASFKNLVPQQATVIRDGDKFQINADQLVVGDLVEMKGGD-------RV  209 (1034)
T ss_pred             ccchhhhhhhheeeeHHHHHHHHHHHHHHHHHHHHhccCCCeeEEEECCEEEEEEHHHCCCCcEEEEcCCc-------ee
Confidence            1346667666666666666677777777666665554 477899999999999999999999999999887       99


Q ss_pred             cceeeEeeCe-eEeeccCCCCCCcceeeccccCCCCccccccccCCCeeEEeeeeEeecCCCCCcCCCCCCCceEEEEEe
Q 003952          295 PADMLILGGS-AIVNEAILTGESTPQWKVSIMGRETGEKLSARRDKSHVLFGGTKILQHTPDKTFPLKTPDGGCLAVVLR  373 (784)
Q Consensus       295 PaD~ill~G~-~~VdES~LTGES~Pv~K~~~~~~~~~~~~~~~~~~~~~lf~GT~v~~~~~~~~~~~~~~~g~~~~~V~~  373 (784)
                      ||||+|++|+ +.||||+|||||.|+.|.+....  +..+    +.+|++|+||.+.             +|.+.++|++
T Consensus       210 PAD~~ll~~~~l~VdES~LTGES~pv~K~~~~~~--~~~~----~~~n~~f~GT~v~-------------~G~~~~vVv~  270 (1034)
T 3ixz_A          210 PADIRILQAQGRKVDNSSLTGESEPQTRSPECTH--ESPL----ETRNIAFFSTMCL-------------EGTAQGLVVN  270 (1034)
T ss_pred             cCCeEEEEeCCceEEecccCCCCCCeeccCCCcc--cccc----ccccceecceeEE-------------eecceEEEEe
Confidence            9999999986 79999999999999999874321  1111    3579999999999             7999999999


Q ss_pred             eccccchhHHHHHhcccccccccchhHHHHHHHHHHHHHHHHhhheeecCcCCccchhHHHHHHHHhhhhcccCCcchHH
Q 003952          374 TGFETSQGKLMRTILFSTERVTANSWESGLFILFLVVFAVIAAGYVLKKGMEDPTRSKYKLFLSCSLIITSVIPPELPME  453 (784)
Q Consensus       374 TG~~T~~gkl~~~i~~~~~~~~~~~~~~~~fi~~ll~~aii~~~~~~~~~~~~~~~~~~~~~l~~i~ii~~~vP~~Lp~~  453 (784)
                      ||.+|..|++.+++...+++.++.++....|...+..++++.+..++..++. ....+...++.++.+++++||++||++
T Consensus       271 tG~~T~~GkI~~~~~~~~~~~tpl~~~~~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~i~l~v~~iPe~Lp~~  349 (1034)
T 3ixz_A          271 TGDRTIIGRIASLASGVENEKTPIAIEIEHFVDIIAGLAILFGATFFIVAMC-IGYTFLRAMVFFMAIVVAYVPEGLLAT  349 (1034)
T ss_pred             ehhhhHhhHHHHhhcccccCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hcchHHHHHHHHHHHHHheeccccHHH
Confidence            9999999999999988888888888877777665554444332222211110 123466778889999999999999999


Q ss_pred             HHHHHHHHHHHHHhcCceecCCCCcCcCCceeEEEecccCcccCCceEEEEEEecCCC-cc--ccC-----CC---CCcH
Q 003952          454 LSIAVNTSLIALARRGIFCTEPFRIPFAGKVDMCCFDKTGTLTSDDMEFRGVVGLSNA-EL--EDD-----MT---KVPV  522 (784)
Q Consensus       454 lslav~~s~~~l~k~~I~~~~~~~ie~lG~vd~icfDKTGTLT~~~m~v~~i~~~~~~-~~--~~~-----~~---~~~~  522 (784)
                      ++++++.+..+|+|+|++|+++.++|.+|++|++|||||||||+|+|+|.+++..+.. ..  ..+     ..   ....
T Consensus       350 vti~la~~~~rmak~~~lvr~l~avE~LG~v~~IcsDKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  429 (1034)
T 3ixz_A          350 VTVCLSLTAKRLASKNCVVKNLEAVETLGSTSVICSDKTGTLTQNRMTVSHLWFDNHIHSADTTEDQSGQTFDQSSETWR  429 (1034)
T ss_pred             HHHHHHHHHHHHhhCCeEecChHHHHhhcCCcEEEcCCCCCcccCeEEEEEEEECCccccccCcccccccccCcCCHHHH
Confidence            9999999999999999999999999999999999999999999999999998754321 00  000     00   0112


Q ss_pred             HHHHHHHhccceEeeCC---------cccCCHHHHHHHhccCccccCCCccccCCCCCcceeEEEEEccCCCCCeeEEEE
Q 003952          523 RTQEILASCHALVFVDN---------KLVGDPLEKAALKGIDWSYKSDEKAMPKRGGGNAVQIVQRHHFASHLKRMSVVV  593 (784)
Q Consensus       523 ~~~~~la~chsl~~~~~---------~~~gdple~All~~~~~~~~~~~~~~~~~~~~~~~~il~~~~Fss~~krmsviv  593 (784)
                      ....+++.||+....++         ...|||+|.|++++..+.....      .+....+++++.+||+|++|||++++
T Consensus       430 ~l~~~~~lc~~a~~~~~~~~~~~~~~~~~gdp~e~All~~~~~~~~~~------~~~~~~~~~~~~~pF~s~rk~m~~v~  503 (1034)
T 3ixz_A          430 ALCRVLTLCNRAAFKSGQDAVPVPKRIVIGDASETALLKFSELTLGNA------MGYRERFPKVCEIPFNSTNKFQLSIH  503 (1034)
T ss_pred             HHHHHHHHhccceeccCcCCCcccCceeccCchHHHHHHHHHHhCCCh------HHHHHhCcceEEeeecCCCceEEEEE
Confidence            34567788998764422         3579999999999875432211      11124577899999999999998887


Q ss_pred             EEC----CEEEEEEeCchHHHHHhhccC-------------chhHHHHHHHHhhccCeEEEEEEEeCCCCChhhHhh---
Q 003952          594 RVQ----EEFFAFVKGAPETIQDRLTDL-------------PSSYIETYKKYTHQGSRVLALAFKSLPDMTVSDARS---  653 (784)
Q Consensus       594 ~~~----~~~~~~~KGapE~I~~~~~~~-------------p~~~~~~~~~~~~~G~Rvlala~k~l~~~~~~~~~~---  653 (784)
                      ...    +++++++|||||.|.++|...             .+.+.+.+++++.+|+|||++|||.++..+..+...   
T Consensus       504 ~~~~~~~~~~~l~~KGApe~il~~c~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~G~RvLa~A~~~l~~~~~~~~~~~~~  583 (1034)
T 3ixz_A          504 TLEDPRDPRHVLVMKGAPERVLERCSSILIKGQELPLDEQWREAFQTAYLSLGGLGERVLGFCQLYLSEKDYPPGYAFDV  583 (1034)
T ss_pred             EecCCCCccEEEEEeCChHHHHHHhHHhhcCCceecCCHHHHHHHHHHHHHHHhcCcHhheEeEEecChhhcccccccch
Confidence            753    468899999999999999531             234677889999999999999999987543222111   


Q ss_pred             hhhhhccCCcEEEEEEeecCCCCcchHHHHHHHhhCCCcEEEEcCCCHHHHHHHHHHccccc
Q 003952          654 LHRDEVENGLTFAGFAVFNCPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVT  715 (784)
Q Consensus       654 ~~r~~~E~~l~flG~l~~~d~lr~da~~~I~~L~~agi~v~MITGDn~~TA~~VA~~~gI~~  715 (784)
                      ...+..|+||+|+|+++++||+|++++++|++|+++||+++|+|||++.||.++|+++||..
T Consensus       584 ~~~~~~e~~l~~lGlv~i~Dp~r~~~~~aI~~l~~aGI~vvmiTGd~~~tA~~ia~~lgi~~  645 (1034)
T 3ixz_A          584 EAMNFPTSGLSFAGLVSMIDPPRATVPDAVLKCRTAGIRVIMVTGDHPITAKAIAASVGIIS  645 (1034)
T ss_pred             hhhhccccCcEEEEEEeccCCCchhHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCCCC
Confidence            12335689999999999999999999999999999999999999999999999999999974


No 3  
>1mhs_A Proton pump, plasma membrane ATPase; ION transport, membrane protein, P-type ATPase, active transport, cryo-electron microscopy; 8.00A {Neurospora crassa} SCOP: i.18.1.1
Probab=100.00  E-value=1.9e-79  Score=739.02  Aligned_cols=479  Identities=20%  Similarity=0.230  Sum_probs=384.1

Q ss_pred             CCCCHHHHHHHHhcCCCCccCCCCccHHHHHHHHhhhhH-HHHHHHhhhhcccchhhhhHHHHHHHHHHHHHHHHHHHHH
Q 003952          164 GHSTEAKIAVATEKWGRNVFEYPQPTFQKLMKENCMEPF-FVFQVFCVGLWCLDEYWYYSLFTLFMLFMFESTMAKSRLK  242 (784)
Q Consensus       164 g~l~~~~v~~~~~~yG~N~~~~~~~s~~~ll~~~~~~pf-~vfqi~~~~lw~l~~y~~~~~~~l~~l~~~~~~~~~~~~~  242 (784)
                      .|||++|+++|+++||+|+++.++++++..|.+++.+|+ +++++++++.|++++|++++ ++++++++......+++++
T Consensus        86 ~GLs~~ea~~r~~~~G~N~l~~~~~~~~~~~l~~f~~~~~~ll~~aai~s~~~g~~~~~~-~i~~vv~i~~~i~~~qe~~  164 (920)
T 1mhs_A           86 VGLTSEEVVQRRRKYGLNQMKEEKENHFLKFLGFFVGPIQFVMEGAAVLAAGLEDWVDFG-VICGLLLLNAVVGFVQEFQ  164 (920)
T ss_dssp             CCCCSHHHHHHHHHTSSSSCCCCCCSSHHHHTHHHHHHHHHHHHHHHHHCTTCSCSSHHH-HHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCHHHHHHHHHhcCCCccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHH-HHHHHHHHHHHHHHHHHHH
Confidence            467888999999999999999888889999999999998 55677777888888776554 3444444445556667777


Q ss_pred             HHHHHHhhhh-CCceEEEEEcCeEEEeecCCCCCCcEEEEcCCCCCCCCCCeecceeeEeeCe--eEeeccCCCCCCcce
Q 003952          243 TLTEIRRVRV-DNQTIMVHRCGKWVKLAGTDLVPGDVVSIGRSSGQTGEDKSVPADMLILGGS--AIVNEAILTGESTPQ  319 (784)
Q Consensus       243 ~~~~l~~~~~-~~~~v~V~R~g~~~~I~s~~LvpGDiV~i~~ge~d~~~~~~vPaD~ill~G~--~~VdES~LTGES~Pv  319 (784)
                      +.+.++++.. .+..++|+|||+|++|+++||+|||+|.|++|+       +|||||+|++|+  +.||||+|||||.|+
T Consensus       165 a~~a~~~L~~l~~~~a~V~RdG~~~~I~~~eLv~GDiV~l~~Gd-------~VPaDg~ll~g~~~l~VDES~LTGES~PV  237 (920)
T 1mhs_A          165 AGSIVDELKKTLALKAVVLRDGTLKEIEAPEVVPGDILQVEEGT-------IIPADGRIVTDDAFLQVDQSALTGESLAV  237 (920)
T ss_dssp             HHHHHHTTTTCCCSSCEEECSSSEEECCTTTSCTTSEEEECTTC-------BCSSEEEEEEESSCCEEBCTTTSSCCCCE
T ss_pred             HHHHHHHhhccCCCEEEEEECCEEEEEEHHHcCCCCEEEeCCCC-------ccccceEEEecCceeeeeccccCCCCcce
Confidence            7666666654 467899999999999999999999999999887       999999999997  599999999999999


Q ss_pred             eeccccCCCCccccccccCCCeeEEeeeeEeecCCCCCcCCCCCCCceEEEEEeeccccchhHHHHHhcccccccccchh
Q 003952          320 WKVSIMGRETGEKLSARRDKSHVLFGGTKILQHTPDKTFPLKTPDGGCLAVVLRTGFETSQGKLMRTILFSTERVTANSW  399 (784)
Q Consensus       320 ~K~~~~~~~~~~~~~~~~~~~~~lf~GT~v~~~~~~~~~~~~~~~g~~~~~V~~TG~~T~~gkl~~~i~~~~~~~~~~~~  399 (784)
                      .|.+                ++.+|+||.+.             +|.+.++|++||.+|..|++.+.+...+.+.++.++
T Consensus       238 ~K~~----------------gd~v~sGT~v~-------------~G~~~~~V~~tG~~T~~g~I~~lv~~a~~~~~~l~~  288 (920)
T 1mhs_A          238 DKHK----------------GDQVFASSAVK-------------RGEAFVVITATGDNTFVGRAAALVNAASGGSGHFTE  288 (920)
T ss_dssp             ECCS----------------SCEECSCBCCS-------------CCCEEEEEEECSTTCSTTTTTSSCCCCCCCCCHHHH
T ss_pred             EecC----------------CCeeecCceEe-------------cceEEEEEEEeCCcCHHHHHHHHHhhcccCCchHHH
Confidence            9985                78999999999             899999999999999999999988777666676665


Q ss_pred             HHHHHHHHHHHHHHHHhhheeecCcCCccchhHHHHHHHHhhhhcccCCcchHHHHHHHHHHHHHHHhcCceecCCCCcC
Q 003952          400 ESGLFILFLVVFAVIAAGYVLKKGMEDPTRSKYKLFLSCSLIITSVIPPELPMELSIAVNTSLIALARRGIFCTEPFRIP  479 (784)
Q Consensus       400 ~~~~fi~~ll~~aii~~~~~~~~~~~~~~~~~~~~~l~~i~ii~~~vP~~Lp~~lslav~~s~~~l~k~~I~~~~~~~ie  479 (784)
                      ....+..+++.++++.+..+|..++. ...++...+..++.+++++|||+||++++++++.+..+|+|+|++|+++.++|
T Consensus       289 ~~~~i~~~l~~~~~~~~~i~~~~~~~-~~~~~~~~l~~av~llV~aiP~aLp~~vti~la~g~~~mak~~ilvk~~~aiE  367 (920)
T 1mhs_A          289 VLNGIGTILLILVIFTLLIVWVSSFY-RSNPIVQILEFTLAITIIGVPVGLPAVVTTTMAVGAAYLAKKKAIVQKLSAIE  367 (920)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHTTTT-TTCCHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHTTCCCCCTTTHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHh-cCCcHHHHHHHHHHHHHHhCchhHHHHHHHHHHHHHHHHHhCCeEEecCchhh
Confidence            55444333332222222222222211 12345667788888999999999999999999999999999999999999999


Q ss_pred             cCCceeEEEecccCcccCCceEEEEEEecCCCccccCCCCCcHHHHHHHHhccceEeeCCcccCCHHHHHHHhccCcccc
Q 003952          480 FAGKVDMCCFDKTGTLTSDDMEFRGVVGLSNAELEDDMTKVPVRTQEILASCHALVFVDNKLVGDPLEKAALKGIDWSYK  559 (784)
Q Consensus       480 ~lG~vd~icfDKTGTLT~~~m~v~~i~~~~~~~~~~~~~~~~~~~~~~la~chsl~~~~~~~~gdple~All~~~~~~~~  559 (784)
                      .+|++|++|||||||||+|+|+|.+++..++.        .+.+.....+.|+...  ++  .+||+|.|+++++.....
T Consensus       368 ~Lg~v~vIc~DKTGTLT~n~m~v~~~~~~~g~--------~~~~ll~~a~l~~~~~--~~--~~~P~e~Al~~~~~~~~~  435 (920)
T 1mhs_A          368 SLAGVEILCSDKTGTLTKNKLSLHDPYTVAGV--------DPEDLMLTACLAASRK--KK--GIDAIDKAFLKSLKYYPR  435 (920)
T ss_dssp             HHHTCCEEEEETBTTTBSSCSCCCCCBCCSCC--------CCTHHHHHHHHSCCCS--SC--SCCSHHHHHHHHHHHSSS
T ss_pred             hhccCcEEEECCCCCccccceeEEEEeecCCC--------CHHHHHHHHHHhcCCc--cc--CCChHHHHHHHHHHhccc
Confidence            99999999999999999999999988654321        0112333334454321  11  159999999987532110


Q ss_pred             CCCccccCCCCCcceeEEEEEccCCCCCeeEEEEEE-CCEEEEEEeCchHHHHHhhcc---Cc----hhHHHHHHHHhhc
Q 003952          560 SDEKAMPKRGGGNAVQIVQRHHFASHLKRMSVVVRV-QEEFFAFVKGAPETIQDRLTD---LP----SSYIETYKKYTHQ  631 (784)
Q Consensus       560 ~~~~~~~~~~~~~~~~il~~~~Fss~~krmsviv~~-~~~~~~~~KGapE~I~~~~~~---~p----~~~~~~~~~~~~~  631 (784)
                             ..+....+++++.+||+|.+|||+++++. +++.+.++|||||.|.++|..   ++    +.+.+..++++++
T Consensus       436 -------~~~~~~~~~~~~~~pF~s~~k~ms~iv~~~~g~~~~~~KGape~il~~c~~~~~~~~~~~~~~~~~~~~~a~~  508 (920)
T 1mhs_A          436 -------AKSVLSKYKVLQFHPFDPVSKKVVAVVESPQGERITCVKGAPLFVLKTVEEDHPIPEEVDQAYKNKVAEFATR  508 (920)
T ss_dssp             -------CCGGGSCCCEEEEEEEETTTTEEEEEECCSSSSCEEEEEECHHHHHHHCCCSSCCCHHHHHHHHHHHHHHHTS
T ss_pred             -------chhhccccceeEEeeccCCCCeEEEEEEeCCCcEEEEEeCCHHHHHHhccccCCCCHHHHHHHHHHHHHHHhC
Confidence                   00112357889999999999999999875 356678999999999999954   33    3466778899999


Q ss_pred             cCeEEEEEEEeCCCCChhhHhhhhhhhccCCcEEEEEEeecCCCCcchHHHHHHHhhCCCcEEEEcCCCHHHHHHHHHHc
Q 003952          632 GSRVLALAFKSLPDMTVSDARSLHRDEVENGLTFAGFAVFNCPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQV  711 (784)
Q Consensus       632 G~Rvlala~k~l~~~~~~~~~~~~r~~~E~~l~flG~l~~~d~lr~da~~~I~~L~~agi~v~MITGDn~~TA~~VA~~~  711 (784)
                      |+||+++|||..                |++++|+|+++++||+|||++++|++||++||+++||||||+.||.+||+++
T Consensus       509 G~RvL~vA~~~~----------------e~~l~~lGli~i~Dp~R~ea~~aI~~l~~aGI~v~MiTGD~~~TA~aIA~~l  572 (920)
T 1mhs_A          509 GFRSLGVARKRG----------------EGSWEILGIMPCMDPPRHDTYKTVCEAKTLGLSIKMLTGDAVGIARETSRQL  572 (920)
T ss_dssp             SCCCCEECCCSS----------------SCSCCCCBBCCCCCCCCHHHHHHHHHHHHHTCEEEEEESSCHHHHHHHHHHH
T ss_pred             CCEEEEEEEecc----------------ccccEEEEEEEEeccccccHHHHHHHHhhcCceEEEEcCCCHHHHHHHHHHc
Confidence            999999998731                4789999999999999999999999999999999999999999999999999


Q ss_pred             cccc
Q 003952          712 HIVT  715 (784)
Q Consensus       712 gI~~  715 (784)
                      ||..
T Consensus       573 GI~~  576 (920)
T 1mhs_A          573 GLGT  576 (920)
T ss_dssp             TSSC
T ss_pred             CCCc
Confidence            9963


No 4  
>3ar4_A Sarcoplasmic/endoplasmic reticulum calcium ATPase; P-type ATPase, hydrolase, calcium transport, calcium binding binding; HET: ATP TG1 PTY; 2.15A {Oryctolagus cuniculus} PDB: 2ear_A* 2eas_A* 2eat_A* 2eau_A* 2dqs_A* 2zbe_A 2zbf_A* 2zbg_A* 3ar2_A* 2zbd_A* 3ar3_A* 3ar5_A* 3ar6_A* 3ar7_A* 3ar8_A* 3ar9_A* 3n5k_A* 1kju_A 1iwo_A 1t5s_A* ...
Probab=100.00  E-value=7.5e-78  Score=741.84  Aligned_cols=541  Identities=23%  Similarity=0.277  Sum_probs=404.8

Q ss_pred             CCchhhhhhhhc-CCCCCHHHHHHHHhcCCCCccCCCC-ccHHHHHHHHhhhhHHHHHHHhh----hhcccch------h
Q 003952          151 PTKETFGYYLKC-TGHSTEAKIAVATEKWGRNVFEYPQ-PTFQKLMKENCMEPFFVFQVFCV----GLWCLDE------Y  218 (784)
Q Consensus       151 ~~~~~~~~~~~~-~g~l~~~~v~~~~~~yG~N~~~~~~-~s~~~ll~~~~~~pf~vfqi~~~----~lw~l~~------y  218 (784)
                      +.++.++.+.++ ..|||++|+++|+++||+|+++.++ ++++++|++|+.+|++++++++.    ++|+.+.      .
T Consensus         9 ~~~~~~~~l~~~~~~GLs~~e~~~r~~~~G~N~l~~~~~~~~~~~~~~qf~~~~~~~l~~~a~~s~~~~~~~~~~~~~~~   88 (995)
T 3ar4_A            9 STEECLAYFGVSETTGLTPDQVKRHLEKYGHNELPAEEGKSLWELVIEQFEDLLVRILLLAACISFVLAWFEEGEETITA   88 (995)
T ss_dssp             CHHHHHHHHTCCTTTCBCHHHHHHHHHHHCCSSCCCCCCCCHHHHHHGGGCSHHHHHHHHHHHHHHHHTTSCCSSGGGSS
T ss_pred             CHHHHHHHhCCCcccCCCHHHHHHHHHhcCCCccCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccchhh
Confidence            355677787765 3578999999999999999999875 59999999999999977655443    3443331      3


Q ss_pred             hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh-CCceEEEEEcCe--EEEeecCCCCCCcEEEEcCCCCCCCCCCeec
Q 003952          219 WYYSLFTLFMLFMFESTMAKSRLKTLTEIRRVRV-DNQTIMVHRCGK--WVKLAGTDLVPGDVVSIGRSSGQTGEDKSVP  295 (784)
Q Consensus       219 ~~~~~~~l~~l~~~~~~~~~~~~~~~~~l~~~~~-~~~~v~V~R~g~--~~~I~s~~LvpGDiV~i~~ge~d~~~~~~vP  295 (784)
                      |+.++++++++++......+++.|+.+.++++.. .+..++|+|||+  +++|+++||+|||+|.|++|+       +||
T Consensus        89 ~~~~~~i~~~~~~~~~i~~~qe~~a~~al~~L~~~~~~~a~V~R~g~~~~~~I~~~~lv~GDiV~l~~Gd-------~IP  161 (995)
T 3ar4_A           89 FVEPFVILLILIANAIVGVWQERNAENAIEALKEYEPEMGKVYRADRKSVQRIKARDIVPGDIVEVAVGD-------KVP  161 (995)
T ss_dssp             SHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHGGGSCSEEEEEBTTCSSCEEEEGGGCCTTCEEEEETTC-------BCC
T ss_pred             HHHhHHhhHHHHHHHHHHHHHHHHHHHHHHHHHccCCCeEEEEeCCCceEEEEEHHHCCCCCEEEECCCC-------ccc
Confidence            5556666666655555666776665444444433 478899999887  699999999999999999887       999


Q ss_pred             ceeeEee---CeeEeeccCCCCCCcceeeccccCCCCccccccccCCCeeEEeeeeEeecCCCCCcCCCCCCCceEEEEE
Q 003952          296 ADMLILG---GSAIVNEAILTGESTPQWKVSIMGRETGEKLSARRDKSHVLFGGTKILQHTPDKTFPLKTPDGGCLAVVL  372 (784)
Q Consensus       296 aD~ill~---G~~~VdES~LTGES~Pv~K~~~~~~~~~~~~~~~~~~~~~lf~GT~v~~~~~~~~~~~~~~~g~~~~~V~  372 (784)
                      |||+|++   |+|.||||+|||||.|+.|.+.+..+.+.   ...+++|++|+||.+.             +|.+.++|+
T Consensus       162 aD~~ll~~~s~~l~VdeS~LTGES~pv~K~~~~~~~~~~---~~~~~~~~v~~GT~v~-------------~G~~~~~V~  225 (995)
T 3ar4_A          162 ADIRILSIKSTTLRVDQSILTGESVSVIKHTEPVPDPRA---VNQDKKNMLFSGTNIA-------------AGKALGIVA  225 (995)
T ss_dssp             SEEEEEEECSSCEEEECHHHHCCCSCEEECCSCCCCTTC---CGGGCTTEECTTCEEE-------------ECEEEEEEE
T ss_pred             ccEEEEEEeeceEEEEcccccCCCcceeccccccCCccc---CcccccceEecCCEEE-------------cceEEEEEE
Confidence            9999975   46899999999999999998754322111   1235789999999999             799999999


Q ss_pred             eeccccchhHHHHHhcccccccccchhHHHHHHH----HHHHHHHHHhhheeecCcCCc--cchh----HHHHHHHHhhh
Q 003952          373 RTGFETSQGKLMRTILFSTERVTANSWESGLFIL----FLVVFAVIAAGYVLKKGMEDP--TRSK----YKLFLSCSLII  442 (784)
Q Consensus       373 ~TG~~T~~gkl~~~i~~~~~~~~~~~~~~~~fi~----~ll~~aii~~~~~~~~~~~~~--~~~~----~~~~l~~i~ii  442 (784)
                      +||.+|..|++++++..++.++++.++....+..    ++++++++.+..++.. +.++  ..++    ...+..++.++
T Consensus       226 ~tG~~T~~g~i~~~~~~~~~~~tplq~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ai~l~  304 (995)
T 3ar4_A          226 TTGVSTEIGKIRDQMAATEQDKTPLQQKLDEFGEQLSKVISLICVAVWLINIGH-FNDPVHGGSWIRGAIYYFKIAVALA  304 (995)
T ss_dssp             ECGGGSHHHHHHHHHHTCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTGGG-GGSCSSSSCHHHHHHHHHHHHHHHH
T ss_pred             EcCcchHHHHHHHHhhcCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hccccccchHHHHHHHHHHHHHHHH
Confidence            9999999999999998888878877665544433    3333333222211100 1111  1111    23455678888


Q ss_pred             hcccCCcchHHHHHHHHHHHHHHHhcCceecCCCCcCcCCceeEEEecccCcccCCceEEEEEEecCC------------
Q 003952          443 TSVIPPELPMELSIAVNTSLIALARRGIFCTEPFRIPFAGKVDMCCFDKTGTLTSDDMEFRGVVGLSN------------  510 (784)
Q Consensus       443 ~~~vP~~Lp~~lslav~~s~~~l~k~~I~~~~~~~ie~lG~vd~icfDKTGTLT~~~m~v~~i~~~~~------------  510 (784)
                      +++|||+||++++++++.+..+|+|+|++|+++.++|.+|++|++|||||||||+|+|+|.++...+.            
T Consensus       305 v~aiP~~Lp~~vt~~la~~~~~ma~~~~lvr~~~~iE~Lg~v~~ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~  384 (995)
T 3ar4_A          305 VAAIPEGLPAVITTCLALGTRRMAKKNAIVRSLPSVETLGCTSVICSDKTGTLTTNQMSVCKMFIIDKVDGDFCSLNEFS  384 (995)
T ss_dssp             HHHSCTTHHHHHHHHHHHHHHHHHHTTEEESCTTHHHHHHTCCEEEEESTTTTBCCCCEEEEEEEEEEEETTEEEEEEEE
T ss_pred             HHhcCcchHHHHHHHHHHHHHHhccCCcEeccchhhhhhcCceEEEecCCCCcccCceEEEEEEecCcccCcccccceee
Confidence            99999999999999999999999999999999999999999999999999999999999999875321            


Q ss_pred             ---CccccCCC-------------CCcHHHHHHHHhccceEeeC---C---cccCCHHHHHHHhcc---CccccCCCccc
Q 003952          511 ---AELEDDMT-------------KVPVRTQEILASCHALVFVD---N---KLVGDPLEKAALKGI---DWSYKSDEKAM  565 (784)
Q Consensus       511 ---~~~~~~~~-------------~~~~~~~~~la~chsl~~~~---~---~~~gdple~All~~~---~~~~~~~~~~~  565 (784)
                         ....+...             ........+++.||+.....   +   +..|||+|.|+++++   ++ +.......
T Consensus       385 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~~alc~~~~~~~~~~~~~~~~~g~p~E~Al~~~a~~~g~-~~~~~~~i  463 (995)
T 3ar4_A          385 ITGSTYAPEGEVLKNDKPIRSGQFDGLVELATICALCNDSSLDFNETKGVYEKVGEATETALTTLVEKMNV-FNTEVRNL  463 (995)
T ss_dssp             ECCSSSSSCCCEEETTEECCGGGCHHHHHHHHHHHHSCCCEEEEETTTTEEEEESCHHHHHHHHHHHHHCT-TCCCCTTS
T ss_pred             ccCCCcCCccccccccccccccccHHHHHHHHHHHHcCCCcccccCCCCceeecCCccHHHHHHHHHHcCC-cccccccc
Confidence               00000000             00113445678899875321   1   246999999998755   22 11110000


Q ss_pred             cCC--------CCCcceeEEEEEccCCCCCeeEEEEEECC------EEEEEEeCchHHHHHhhccC-------------c
Q 003952          566 PKR--------GGGNAVQIVQRHHFASHLKRMSVVVRVQE------EFFAFVKGAPETIQDRLTDL-------------P  618 (784)
Q Consensus       566 ~~~--------~~~~~~~il~~~~Fss~~krmsviv~~~~------~~~~~~KGapE~I~~~~~~~-------------p  618 (784)
                      +..        .....+++++++||+|++|||||+++..+      +..+++|||||.|.++|...             .
T Consensus       464 ~~~~~~~~~~~~~~~~~~~~~~~pF~s~rk~msvi~~~~~g~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~l~~~~~  543 (995)
T 3ar4_A          464 SKVERANACNSVIRQLMKKEFTLEFSRDRKSMSVYCSPAKSSRAAVGNKMFVKGAPEGVIDRCNYVRVGTTRVPMTGPVK  543 (995)
T ss_dssp             CTTTSTTHHHHHHHHHEEEEEEEEEETTTTEEEEEEEESSCCSCSCCCEEEEEECHHHHHHTEEEEEETTEEEECCHHHH
T ss_pred             ccccccccchhhhhhhCceEEEeecCCCCCeeEEEEecCCCCccccceEEEEcCCHHHHHHhcchhhcCCCcccCCHHHH
Confidence            000        01245899999999999999999998643      47899999999999999532             1


Q ss_pred             hhHHHHHHHH--hhccCeEEEEEEEeCCCCChh-hH-hhhhhhhccCCcEEEEEEeecCCCCcchHHHHHHHhhCCCcEE
Q 003952          619 SSYIETYKKY--THQGSRVLALAFKSLPDMTVS-DA-RSLHRDEVENGLTFAGFAVFNCPIREDSAKILSELKNSSQDLA  694 (784)
Q Consensus       619 ~~~~~~~~~~--~~~G~Rvlala~k~l~~~~~~-~~-~~~~r~~~E~~l~flG~l~~~d~lr~da~~~I~~L~~agi~v~  694 (784)
                      +.+.+.+++|  +++|+|||++|||+++..... .. ....++.+|+|++|+|+++++||+|||++++|+.|+++||+++
T Consensus       544 ~~~~~~~~~~~~a~~GlRvLa~A~k~~~~~~~~~~~~~~~~~~~~e~~l~~lG~~~i~D~lr~~~~~~I~~l~~~Gi~v~  623 (995)
T 3ar4_A          544 EKILSVIKEWGTGRDTLRCLALATRDTPPKREEMVLDDSSRFMEYETDLTFVGVVGMLDPPRKEVMGSIQLCRDAGIRVI  623 (995)
T ss_dssp             HHHHHHHHHHHHSTTCCEEEEEEEESSCCCGGGCCTTCGGGHHHHTCSEEEEEEEEEECCBCTTHHHHHHHHHHTTCEEE
T ss_pred             HHHHHHHHHHHhhhccceEEEEEEEecCccccccccccchhhhhhccCcEEEEEEeecCCCchhHHHHHHHHHHcCCEEE
Confidence            3466778889  999999999999998642211 00 1234577899999999999999999999999999999999999


Q ss_pred             EEcCCCHHHHHHHHHHcccccC
Q 003952          695 MITGDQALTACYVASQVHIVTK  716 (784)
Q Consensus       695 MITGDn~~TA~~VA~~~gI~~~  716 (784)
                      |+||||+.||.++|+++||...
T Consensus       624 miTGD~~~ta~~ia~~lgi~~~  645 (995)
T 3ar4_A          624 MITGDNKGTAIAICRRIGIFGE  645 (995)
T ss_dssp             EEESSCHHHHHHHHHHHTSSCT
T ss_pred             EECCCCHHHHHHHHHHcCcCCC
Confidence            9999999999999999999753


No 5  
>3b8c_A ATPase 2, plasma membrane-type; P-type ATPase, proton pump, ATP-binding, hydrogen ION transport, hydrolase, ION transport; HET: ACP; 3.60A {Arabidopsis thaliana}
Probab=100.00  E-value=4.8e-81  Score=753.42  Aligned_cols=493  Identities=22%  Similarity=0.238  Sum_probs=388.4

Q ss_pred             CCchhhhhhhhcCCCCCHHHHHHHHhcCCCCccCCCCccHHHHHHHHhhhhHH-HHHHHhhhhcccc------hhhhhHH
Q 003952          151 PTKETFGYYLKCTGHSTEAKIAVATEKWGRNVFEYPQPTFQKLMKENCMEPFF-VFQVFCVGLWCLD------EYWYYSL  223 (784)
Q Consensus       151 ~~~~~~~~~~~~~g~l~~~~v~~~~~~yG~N~~~~~~~s~~~ll~~~~~~pf~-vfqi~~~~lw~l~------~y~~~~~  223 (784)
                      +.++.++.+.++..|||++|+++|+++||+|+++.++++++..|.+++.+||+ ++++++++.|++.      ..|+.++
T Consensus        18 ~~~~~~~~l~~~~~GLs~~e~~~r~~~~G~N~l~~~~~~~~~~~l~~~~~p~~~il~~aaiis~~l~~~~~~~~~~~~~~   97 (885)
T 3b8c_A           18 PIEEVFQQLKCSREGLTTQEGEDRIQIFGPNKLEEKKESKLLKFLGFMWNPLSWVMEMAAIMAIALANGDGRPPDWQDFV   97 (885)
T ss_dssp             STTCCTTTSSSCSSCSTHHHHHHHSSSCCSCCTTTTCCCTTSSTTSCCCGGGSSHHHHHHHGGGGSSCCTTSCSCCTTHH
T ss_pred             CHHHHHHHhCCCCCCCCHHHHHHHHHhcCCCccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccHHHHH
Confidence            35567777776666789999999999999999998888888888999999994 5666666777765      1344455


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhhhh-CCceEEEEEcCeEEEeecCCCCCCcEEEEcCCCCCCCCCCeecceeeEee
Q 003952          224 FTLFMLFMFESTMAKSRLKTLTEIRRVRV-DNQTIMVHRCGKWVKLAGTDLVPGDVVSIGRSSGQTGEDKSVPADMLILG  302 (784)
Q Consensus       224 ~~l~~l~~~~~~~~~~~~~~~~~l~~~~~-~~~~v~V~R~g~~~~I~s~~LvpGDiV~i~~ge~d~~~~~~vPaD~ill~  302 (784)
                      .+++++++......++++|+.+.++++.. .+.+++|+|||+|++|+++||+|||+|.|++|+       +|||||+|++
T Consensus        98 ~I~~~v~i~~~l~~~qe~ka~~al~~L~~~~~~~a~V~RdG~~~~I~~~~Lv~GDiV~l~~Gd-------~IPaDg~ll~  170 (885)
T 3b8c_A           98 GIICLLVINSTISFIEENNAGNAAAALMAGLAPKTKVLRDGKWSEQEAAILVPGDIVSIKLGD-------IIPADARLLE  170 (885)
T ss_dssp             HHHHHTTTTTTTTTTTTTTTTTHHHHTTTSCSCCCCCCCSSCSCCCCTTTTCTTSBCCCCSSC-------CCSSCCCCCC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCeEEEEECCEEEEEEHHHCCCCCEEEECCCC-------EEeeceEEEE
Confidence            54444444333445555555555555443 467789999999999999999999999999887       9999999999


Q ss_pred             Ce-eEeeccCCCCCCcceeeccccCCCCccccccccCCCeeEEeeeeEeecCCCCCcCCCCCCCceEEEEEeeccccchh
Q 003952          303 GS-AIVNEAILTGESTPQWKVSIMGRETGEKLSARRDKSHVLFGGTKILQHTPDKTFPLKTPDGGCLAVVLRTGFETSQG  381 (784)
Q Consensus       303 G~-~~VdES~LTGES~Pv~K~~~~~~~~~~~~~~~~~~~~~lf~GT~v~~~~~~~~~~~~~~~g~~~~~V~~TG~~T~~g  381 (784)
                      |+ +.||||+|||||.|+.|.+                ++.+|+||.+.             +|.+.++|++||.+|..|
T Consensus       171 g~~l~VdES~LTGES~Pv~K~~----------------g~~v~~GT~v~-------------~G~~~~~V~~tG~~T~~g  221 (885)
T 3b8c_A          171 GDPLKVDQSALTGESLPVTKHP----------------GQEVFSGSTCK-------------QGEIEAVVIATGVHTFFG  221 (885)
T ss_dssp             SSCBCCCCCSTTCCSSCCCBSS----------------CCCCCSCCCCC-------------SCCCCCBCCSCTTTTTST
T ss_pred             cCcccccccccCCCCcceEecC----------------CCccccCeEEe-------------eeEEEEEEEEcCcccHHH
Confidence            97 4899999999999999986                78999999999             899999999999999999


Q ss_pred             HHHHHhcccccccccchhHHHHHHHH----HHH-HHHHHhhheeecCcCCccchhHHHHHHHHhhhhcccCCcchHHHHH
Q 003952          382 KLMRTILFSTERVTANSWESGLFILF----LVV-FAVIAAGYVLKKGMEDPTRSKYKLFLSCSLIITSVIPPELPMELSI  456 (784)
Q Consensus       382 kl~~~i~~~~~~~~~~~~~~~~fi~~----ll~-~aii~~~~~~~~~~~~~~~~~~~~~l~~i~ii~~~vP~~Lp~~lsl  456 (784)
                      ++.+.+.. .++.++.++....+..+    +++ ++++.+..++..     ..++...+..++.+++++||++||+++++
T Consensus       222 ~i~~lv~~-~~~~~~lq~~~~~i~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~v~llv~aiP~aLp~~vti  295 (885)
T 3b8c_A          222 KAAHLVDS-TNQVGHFQKVLTAIGNFCICSIAIGMVIEIIVMYPIQ-----RRKYRDGIDNLLVLLIGGIPIAMPTVLSV  295 (885)
T ss_dssp             TCCCSCCS-CSCCSTTTTTTHHHHHHHHHHHHHHHHHHSTTTTTTT-----CSCSTTHHHHHHHHTTTTCCSSTTTHHHH
T ss_pred             HHHHHHhc-ccccChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-----cCcHHHHHHHHHHHHHHHhhhHHHHHHHH
Confidence            99987765 44555555444333322    111 111111122211     12345567888999999999999999999


Q ss_pred             HHHHHHHHHHhcCceecCCCCcCcCCceeEEEecccCcccCCceEEEEEE-ecCCCccccCCCCCcHHHHHHHHhccceE
Q 003952          457 AVNTSLIALARRGIFCTEPFRIPFAGKVDMCCFDKTGTLTSDDMEFRGVV-GLSNAELEDDMTKVPVRTQEILASCHALV  535 (784)
Q Consensus       457 av~~s~~~l~k~~I~~~~~~~ie~lG~vd~icfDKTGTLT~~~m~v~~i~-~~~~~~~~~~~~~~~~~~~~~la~chsl~  535 (784)
                      +++.+..+|+|+|++||++.++|.+|++|++|||||||||+|+|+|.... .....      ...+.+.....+.|+...
T Consensus       296 ~la~g~~r~ak~~ilvk~~~aiE~Lg~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~------~~~~~~ll~~aa~~~~~~  369 (885)
T 3b8c_A          296 TMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLVEVFCK------GVEKDQVLLFAAMASRVE  369 (885)
T ss_dssp             TTTHHHHHHTTTSCCCSSGGGHHHHTTCCCCEEECCCCCSCCCCCCCSCCCCSSCS------STTHHHHHHHHHHHCCSS
T ss_pred             HHHHHHHHHHhCCeEeCCchHHHHHhCCCEEEECCCCCcccCceEEEEEEEeccCC------CCCHHHHHHHHHHHhCCC
Confidence            99999999999999999999999999999999999999999999997421 11000      011223344555666431


Q ss_pred             eeCCcccCCHHHHHHHhccCccccCCCccccCCCCCcceeEEEEEccCCCCCeeEEEEEE-CCEEEEEEeCchHHHHHhh
Q 003952          536 FVDNKLVGDPLEKAALKGIDWSYKSDEKAMPKRGGGNAVQIVQRHHFASHLKRMSVVVRV-QEEFFAFVKGAPETIQDRL  614 (784)
Q Consensus       536 ~~~~~~~gdple~All~~~~~~~~~~~~~~~~~~~~~~~~il~~~~Fss~~krmsviv~~-~~~~~~~~KGapE~I~~~~  614 (784)
                            .+||+|.|++++++-.          ......+++++.+||+|.+|||+++++. +++.+.++|||||.+.++|
T Consensus       370 ------~~~p~~~Al~~~~~~~----------~~~~~~~~~~~~~pF~s~~k~~sv~~~~~~g~~~~~~KGa~e~il~~c  433 (885)
T 3b8c_A          370 ------NQDAIDAAMVGMLADP----------KEARAGIREVHFLPFNPVDKRTALTYIDGSGNWHRVSKGAPEQILELA  433 (885)
T ss_dssp             ------SCCSHHHHHHHTTCCT----------TCCCCSSCCBCCCCCCTTTCCCCCBBCSSSSCBCBCCCCSGGGTSSSS
T ss_pred             ------CCCchHHHHHHHhhch----------hhHhhcCceeecccCCcccceEEEEEEecCCcEEEEEeCCHHHHHHhc
Confidence                  4899999999876410          0112346677889999999999988874 5566789999999999999


Q ss_pred             c---cCchhHHHHHHHHhhccCeEEEEEEEeCCCCChhhHhhhhhhhccCCcEEEEEEeecCCCCcchHHHHHHHhhCCC
Q 003952          615 T---DLPSSYIETYKKYTHQGSRVLALAFKSLPDMTVSDARSLHRDEVENGLTFAGFAVFNCPIREDSAKILSELKNSSQ  691 (784)
Q Consensus       615 ~---~~p~~~~~~~~~~~~~G~Rvlala~k~l~~~~~~~~~~~~r~~~E~~l~flG~l~~~d~lr~da~~~I~~L~~agi  691 (784)
                      .   ..++++.+.+++++++|+||+++|||++++.+        ++..|+|++|+|+++++||+|||++++|++||++||
T Consensus       434 ~~~~~~~~~~~~~~~~~a~~G~rvl~vA~~~~~~~~--------~~~~e~~l~~lGli~i~Dp~R~~a~~aI~~l~~aGI  505 (885)
T 3b8c_A          434 KASNDLSKKVLSIIDKYAERGLRSLAVARQVVPEKT--------KESPGAPWEFVGLLPLFDPPRHDSAETIRRALNLGV  505 (885)
T ss_dssp             CCCSTTTTTHHHHHHHHTTTTCEEEEECCBCCCSSS--------SSCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHTTC
T ss_pred             cCchhhHHHHHHHHHHHHhCCCeEEEEEEecccccc--------ccccccCcEEEEEEEeecccchhHHHHHHHHHHcCC
Confidence            4   45778889999999999999999999886432        356788999999999999999999999999999999


Q ss_pred             cEEEEcCCCHHHHHHHHHHccccc
Q 003952          692 DLAMITGDQALTACYVASQVHIVT  715 (784)
Q Consensus       692 ~v~MITGDn~~TA~~VA~~~gI~~  715 (784)
                      +++||||||+.||.+||+++||..
T Consensus       506 ~v~MiTGD~~~tA~~iA~~lGi~~  529 (885)
T 3b8c_A          506 NVKMITGDQLAIGKETGRRLGMGT  529 (885)
T ss_dssp             CCEEEESSCHHHHTHHHHTTTCTT
T ss_pred             cEEEEcCCChHHHHHHHHHhCCcc
Confidence            999999999999999999999964


No 6  
>3rfu_A Copper efflux ATPase; alpha helical, CPC, CXXC, ATP-binding, hydrolase, ION transp magnesium, Cu+, membrane, metal-binding; 3.20A {Legionella pneumophila subsp}
Probab=100.00  E-value=3.3e-63  Score=587.65  Aligned_cols=438  Identities=19%  Similarity=0.229  Sum_probs=347.0

Q ss_pred             chhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh-CCceEEEEE-cCeEEEeecCCCCCCcEEEEcCCCCCCCCCCe
Q 003952          216 DEYWYYSLFTLFMLFMFESTMAKSRLKTLTEIRRVRV-DNQTIMVHR-CGKWVKLAGTDLVPGDVVSIGRSSGQTGEDKS  293 (784)
Q Consensus       216 ~~y~~~~~~~l~~l~~~~~~~~~~~~~~~~~l~~~~~-~~~~v~V~R-~g~~~~I~s~~LvpGDiV~i~~ge~d~~~~~~  293 (784)
                      ..||..+.++++++++......+++.|+.+.++++.. .|.+++|+| ||++++|++++|+|||+|.|++||       +
T Consensus       185 ~~yfe~a~~ii~~~llg~~le~~a~~~~~~ai~~L~~l~p~~a~vv~~dg~~~~v~~~~l~~GDiv~v~~Ge-------~  257 (736)
T 3rfu_A          185 AVYFEAAAVITTLVLLGQVLELKAREQTGSAIRALLKLVPESAHRIKEDGSEEEVSLDNVAVGDLLRVRPGE-------K  257 (736)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHHHHHHCCCSSHHHHHTCCCCCEEEEEETTEEEEEEETTTCCTTCEECCCSSE-------E
T ss_pred             ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEecCCEEEEEEHhhCCCCCEEEECCCC-------c
Confidence            3466666676677777777777777776667776655 588899998 999999999999999999999988       9


Q ss_pred             ecceeeEeeCeeEeeccCCCCCCcceeeccccCCCCccccccccCCCeeEEeeeeEeecCCCCCcCCCCCCCceEEEEEe
Q 003952          294 VPADMLILGGSAIVNEAILTGESTPQWKVSIMGRETGEKLSARRDKSHVLFGGTKILQHTPDKTFPLKTPDGGCLAVVLR  373 (784)
Q Consensus       294 vPaD~ill~G~~~VdES~LTGES~Pv~K~~~~~~~~~~~~~~~~~~~~~lf~GT~v~~~~~~~~~~~~~~~g~~~~~V~~  373 (784)
                      |||||+|++|++.||||+|||||.|+.|.+                ++.+|+||.+.             +|.+.++|++
T Consensus       258 IPaDg~vl~G~~~VDES~LTGES~Pv~K~~----------------gd~v~~Gt~~~-------------~G~~~~~v~~  308 (736)
T 3rfu_A          258 IPVDGEVQEGRSFVDESMVTGEPIPVAKEA----------------SAKVIGATINQ-------------TGSFVMKALH  308 (736)
T ss_dssp             CCSCEEECSSCEEEECSSSTTCSSCEEECT----------------TCEECTTCEEE-------------SCCCCEEECC
T ss_pred             ccccEEEEECceEeeecccCCccccEEecc----------------CCcCCCceEec-------------cceEEEEEEE
Confidence            999999999999999999999999999986                78999999999             8999999999


Q ss_pred             eccccchhHHHHHhcccccccccc----hhHHHHHHHHHHHHHHHHhhheeecCcCCccchhHHHHHHHHhhhhcccCCc
Q 003952          374 TGFETSQGKLMRTILFSTERVTAN----SWESGLFILFLVVFAVIAAGYVLKKGMEDPTRSKYKLFLSCSLIITSVIPPE  449 (784)
Q Consensus       374 TG~~T~~gkl~~~i~~~~~~~~~~----~~~~~~fi~~ll~~aii~~~~~~~~~~~~~~~~~~~~~l~~i~ii~~~vP~~  449 (784)
                      ||.+|..||+++++..++.++++.    ++.+.+|+.++++++++.+.+|+..+.   ...+...+..++.+++++|||+
T Consensus       309 ~G~~T~l~~I~~lv~~a~~~k~~~q~~~d~~a~~~v~~vl~ia~~~~~~w~~~~~---~~~~~~~l~~ai~vlviacPca  385 (736)
T 3rfu_A          309 VGSDTMLARIVQMVSDAQRSRAPIQRLADTVSGWFVPAVILVAVLSFIVWALLGP---QPALSYGLIAAVSVLIIACPCA  385 (736)
T ss_dssp             CSTTSHHHHHHHHHHHHHSSCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCS---SSSTTHHHHHHHHHHHHHCCST
T ss_pred             echhhHHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC---CchHHHHHHHHHHhHHHhhhhH
Confidence            999999999999998776666554    445667777777777777666655442   1234567888899999999999


Q ss_pred             chHHHHHHHHHHHHHHHhcCceecCCCCcCcCCceeEEEecccCcccCCceEEEEEEecCCCccccCCCCCcHHHHHHHH
Q 003952          450 LPMELSIAVNTSLIALARRGIFCTEPFRIPFAGKVDMCCFDKTGTLTSDDMEFRGVVGLSNAELEDDMTKVPVRTQEILA  529 (784)
Q Consensus       450 Lp~~lslav~~s~~~l~k~~I~~~~~~~ie~lG~vd~icfDKTGTLT~~~m~v~~i~~~~~~~~~~~~~~~~~~~~~~la  529 (784)
                      ||+++++++..+..+++|+||+||++.++|.+|++|++|||||||||+|+|.|.++. .++.         ..+  .++.
T Consensus       386 L~la~p~a~~~~~~~~a~~gilvk~~~alE~l~~v~~i~fDKTGTLT~g~~~v~~i~-~~~~---------~~~--~~l~  453 (736)
T 3rfu_A          386 LGLATPMSIMVGVGKGAQSGVLIKNAEALERMEKVNTLVVDKTGTLTEGHPKLTRIV-TDDF---------VED--NALA  453 (736)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTEEESCHHHHHHHTSCCEEEECCBTTTBCSSCEEEEEE-ESSS---------CHH--HHHH
T ss_pred             HHHHHHHHHHHHHHHHhhcceeechHHHHHHhcCCCEEEEeCCCCCcCCceEEEEEE-ecCC---------CHH--HHHH
Confidence            999999999999999999999999999999999999999999999999999999988 2221         111  1222


Q ss_pred             hccceEeeCCcccCCHHHHHHHhccCccccCCCccccCCCCCcceeEEEEEccCCCCCeeEEEEEECCEEEEEEeCchHH
Q 003952          530 SCHALVFVDNKLVGDPLEKAALKGIDWSYKSDEKAMPKRGGGNAVQIVQRHHFASHLKRMSVVVRVQEEFFAFVKGAPET  609 (784)
Q Consensus       530 ~chsl~~~~~~~~gdple~All~~~~~~~~~~~~~~~~~~~~~~~~il~~~~Fss~~krmsviv~~~~~~~~~~KGapE~  609 (784)
                      .++++.    ..+.||+++|+++++...               .+......+|++..++ ++....+++  .+.+|+++.
T Consensus       454 ~aa~le----~~s~hPla~Aiv~~a~~~---------------~~~~~~~~~f~~~~g~-gv~~~~~g~--~~~~G~~~~  511 (736)
T 3rfu_A          454 LAAALE----HQSEHPLANAIVHAAKEK---------------GLSLGSVEAFEAPTGK-GVVGQVDGH--HVAIGNARL  511 (736)
T ss_dssp             HHHHHH----HSSCCHHHHHHHHHHHTT---------------CCCCCCCSCCCCCTTT-EEEECSSSS--CEEEESHHH
T ss_pred             HHHHHh----hcCCChHHHHHHHHHHhc---------------CCCccCcccccccCCc-eEEEEECCE--EEEEcCHHH
Confidence            222332    225799999999876311               0011122356666554 566666665  567899999


Q ss_pred             HHHhhccCchhHHHHHHHHhhccCeEEEEEEEeCCCCChhhHhhhhhhhccCCcEEEEEEeecCCCCcchHHHHHHHhhC
Q 003952          610 IQDRLTDLPSSYIETYKKYTHQGSRVLALAFKSLPDMTVSDARSLHRDEVENGLTFAGFAVFNCPIREDSAKILSELKNS  689 (784)
Q Consensus       610 I~~~~~~~p~~~~~~~~~~~~~G~Rvlala~k~l~~~~~~~~~~~~r~~~E~~l~flG~l~~~d~lr~da~~~I~~L~~a  689 (784)
                      +.+..... +.+.+..++++++|+|++++|+                     |.+++|+++++|++|++++++|++||++
T Consensus       512 ~~~~~~~~-~~~~~~~~~~~~~G~~vl~va~---------------------d~~~~G~i~i~D~i~~~~~~aI~~L~~~  569 (736)
T 3rfu_A          512 MQEHGGDN-APLFEKADELRGKGASVMFMAV---------------------DGKTVALLVVEDPIKSSTPETILELQQS  569 (736)
T ss_dssp             HHHHCCCC-HHHHHHHHHHHHTTCEEEEEEE---------------------TTEEEEEEEEECCBCSSHHHHHHHHHHH
T ss_pred             HHHcCCCh-hHHHHHHHHHHhcCCeEEEEEE---------------------CCEEEEEEEeeccchhhHHHHHHHHHHC
Confidence            98766443 4567778999999999999994                     5689999999999999999999999999


Q ss_pred             CCcEEEEcCCCHHHHHHHHHHcccccCCcEEEecCCCCCeeEEeCCCcccccccchhhhhccCCC-eeEEEechhHHHH
Q 003952          690 SQDLAMITGDQALTACYVASQVHIVTKPVLILCPVKNGKVYEWVSPDETEKIQYSEKEVEGLTDA-HDLCIGGDCFEML  767 (784)
Q Consensus       690 gi~v~MITGDn~~TA~~VA~~~gI~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~l~~tGd~l~~l  767 (784)
                      |++++|+|||+..||.++|+++||.+....+.++             +      |...+++++++ ..++|+|||.|++
T Consensus       570 Gi~v~mlTGd~~~~a~~ia~~lgi~~v~a~~~P~-------------~------K~~~v~~l~~~g~~V~~vGDG~ND~  629 (736)
T 3rfu_A          570 GIEIVMLTGDSKRTAEAVAGTLGIKKVVAEIMPE-------------D------KSRIVSELKDKGLIVAMAGDGVNDA  629 (736)
T ss_dssp             TCEEEEECSSCHHHHHHHHHHHTCCCEECSCCHH-------------H------HHHHHHHHHHHSCCEEEEECSSTTH
T ss_pred             CCeEEEECCCCHHHHHHHHHHcCCCEEEEecCHH-------------H------HHHHHHHHHhcCCEEEEEECChHhH
Confidence            9999999999999999999999996321111110             1      33344455443 3599999999986


No 7  
>3j08_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus}
Probab=100.00  E-value=1.4e-62  Score=578.14  Aligned_cols=448  Identities=20%  Similarity=0.225  Sum_probs=347.0

Q ss_pred             HHHHHHHhhhhcccchhhhh--HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh-CCceEEEEEcCeEEEeecCCCCCCcE
Q 003952          202 FFVFQVFCVGLWCLDEYWYY--SLFTLFMLFMFESTMAKSRLKTLTEIRRVRV-DNQTIMVHRCGKWVKLAGTDLVPGDV  278 (784)
Q Consensus       202 f~vfqi~~~~lw~l~~y~~~--~~~~l~~l~~~~~~~~~~~~~~~~~l~~~~~-~~~~v~V~R~g~~~~I~s~~LvpGDi  278 (784)
                      .|++++++++.|..++|+||  +.++++++.+......+++.|+.+.++++.. .|.+++|+|||+|++|+++||+|||+
T Consensus        77 a~~~s~~~~~~~~~~~~~~~~~~~~i~~~~~ig~~le~~~~~~~~~~l~~l~~l~~~~a~v~r~g~~~~i~~~~l~~GDi  156 (645)
T 3j08_A           77 AFLASVLSTAGVLPREYSFYETSVLLLAFLLLGRTLEARAKSRTGEAIKKLVGLQAKTAVVIRDGKEIAVPVEEVAVGDI  156 (645)
T ss_dssp             HHHHHHHHHHHHCCSCSSCCCSHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHTSCSEEEEEETTEEEEEEGGGCCTTCE
T ss_pred             HHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCEEEEEEHHHCCCCCE
Confidence            45677777777777775333  4445555555555555665554444444433 58899999999999999999999999


Q ss_pred             EEEcCCCCCCCCCCeecceeeEeeCeeEeeccCCCCCCcceeeccccCCCCccccccccCCCeeEEeeeeEeecCCCCCc
Q 003952          279 VSIGRSSGQTGEDKSVPADMLILGGSAIVNEAILTGESTPQWKVSIMGRETGEKLSARRDKSHVLFGGTKILQHTPDKTF  358 (784)
Q Consensus       279 V~i~~ge~d~~~~~~vPaD~ill~G~~~VdES~LTGES~Pv~K~~~~~~~~~~~~~~~~~~~~~lf~GT~v~~~~~~~~~  358 (784)
                      |.|++|+       +|||||+|++|++.||||+|||||.|+.|.+                ++.+|+||.+.        
T Consensus       157 v~v~~Ge-------~IPaDg~vl~G~~~VdeS~LTGES~Pv~K~~----------------g~~v~~Gt~~~--------  205 (645)
T 3j08_A          157 VIVRPGE-------KIPVDGVVVEGESYVDESMISGEPVPVLKSK----------------GDEVFGATINN--------  205 (645)
T ss_dssp             EEECTTC-------BCCSEEEEEECCEEEECHHHHCCSSCEEECT----------------TCEECTTCEEC--------
T ss_pred             EEECCCC-------EEeeEEEEEECcEEEEcccccCCCCceecCC----------------CCEeeccEEEe--------
Confidence            9999887       9999999999999999999999999999986                88999999999        


Q ss_pred             CCCCCCCceEEEEEeeccccchhHHHHHhcccccccccchh----HHHHHHHHHHHHHHHHhhheeecCcCCccchhHHH
Q 003952          359 PLKTPDGGCLAVVLRTGFETSQGKLMRTILFSTERVTANSW----ESGLFILFLVVFAVIAAGYVLKKGMEDPTRSKYKL  434 (784)
Q Consensus       359 ~~~~~~g~~~~~V~~TG~~T~~gkl~~~i~~~~~~~~~~~~----~~~~fi~~ll~~aii~~~~~~~~~~~~~~~~~~~~  434 (784)
                           +|.+.++|++||.+|..|++++.+..++.++++.++    .+.+|+.++++++++++.+|+..+    ..++...
T Consensus       206 -----~g~~~~~v~~~G~~T~l~~i~~lv~~a~~~k~~~~~~~d~~~~~~~~~vl~~a~~~~~~~~~~~----~~~~~~~  276 (645)
T 3j08_A          206 -----TGVLKIRATRVGGETLLAQIVKLVEDAMGSKPPIQRLADKVVAYFIPTVLLVAISAFIYWYFIA----HAPLLFA  276 (645)
T ss_dssp             -----SSCEEEEEEECGGGSHHHHHHHHHSCCCCCCCSHHHHHHHHHHHHHHHHHHHHHHHHHCSSCCC----SCSCCCT
T ss_pred             -----cCcEEEEEEEcCCccHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc----CCcHHHH
Confidence                 899999999999999999999999888777766554    345566666667776666655432    1123345


Q ss_pred             HHHHHhhhhcccCCcchHHHHHHHHHHHHHHHhcCceecCCCCcCcCCceeEEEecccCcccCCceEEEEEEecCCCccc
Q 003952          435 FLSCSLIITSVIPPELPMELSIAVNTSLIALARRGIFCTEPFRIPFAGKVDMCCFDKTGTLTSDDMEFRGVVGLSNAELE  514 (784)
Q Consensus       435 ~l~~i~ii~~~vP~~Lp~~lslav~~s~~~l~k~~I~~~~~~~ie~lG~vd~icfDKTGTLT~~~m~v~~i~~~~~~~~~  514 (784)
                      +..++.+++.+|||+||+++++++..++.+++|+||+||++.++|.+|++|++|||||||||+|+|+|.++...+.+   
T Consensus       277 ~~~~i~vlvia~P~aL~la~p~a~~~~~~~~a~~gilvk~~~~lE~lg~v~~i~fDKTGTLT~~~~~v~~~~~~~~~---  353 (645)
T 3j08_A          277 FTTLIAVLVVACPCAFGLATPTALTVGMGKGAELGILIKNADALEVAEKVTAVIFDKTGTLTKGKPEVTDLVPLNGD---  353 (645)
T ss_dssp             TTTTHHHHHHHSCTTHHHHHHHHHHHHHHHHHTTCCCCSSTTHHHHGGGCCEEEEEGGGTSSSSCCEEEEEEESSSC---
T ss_pred             HHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHCCeEecCchHHHHhhCCCEEEEcCcccccCCCeEEEEEEeCCCC---
Confidence            66778888999999999999999999999999999999999999999999999999999999999999999876421   


Q ss_pred             cCCCCCcHHHHHHHHhccceEeeCCcccCCHHHHHHHhccCccccCCCccccCCCCCcceeEEEEEccCCCCCeeEEEEE
Q 003952          515 DDMTKVPVRTQEILASCHALVFVDNKLVGDPLEKAALKGIDWSYKSDEKAMPKRGGGNAVQIVQRHHFASHLKRMSVVVR  594 (784)
Q Consensus       515 ~~~~~~~~~~~~~la~chsl~~~~~~~~gdple~All~~~~~~~~~~~~~~~~~~~~~~~~il~~~~Fss~~krmsviv~  594 (784)
                            ..+.....+.|..       .+.||+++|+++++...-   ....    ...        +|++...+ ++.. 
T Consensus       354 ------~~~~l~~aa~~e~-------~s~hPla~Aiv~~a~~~g---~~~~----~~~--------~~~~~~g~-g~~~-  403 (645)
T 3j08_A          354 ------ERELLRLAAIAER-------RSEHPIAEAIVKKALEHG---IELG----EPE--------KVEVIAGE-GVVA-  403 (645)
T ss_dssp             ------HHHHHHHHHHHHT-------TCCSHHHHHHHHHHHHTT---CCCC----SCC--------CCEEETTT-EEEE-
T ss_pred             ------HHHHHHHHHHHhh-------cCCChhHHHHHHHHHhcC---CCcC----Ccc--------ceEEecCC-ceEE-
Confidence                  1233333444432       257999999998763110   0000    000        11111111 2222 


Q ss_pred             ECCEEEEEEeCchHHHHHhhccCchhHHHHHHHHhhccCeEEEEEEEeCCCCChhhHhhhhhhhccCCcEEEEEEeecCC
Q 003952          595 VQEEFFAFVKGAPETIQDRLTDLPSSYIETYKKYTHQGSRVLALAFKSLPDMTVSDARSLHRDEVENGLTFAGFAVFNCP  674 (784)
Q Consensus       595 ~~~~~~~~~KGapE~I~~~~~~~p~~~~~~~~~~~~~G~Rvlala~k~l~~~~~~~~~~~~r~~~E~~l~flG~l~~~d~  674 (784)
                           ..+.+|+++.+.+.....++.+.+.+++++.+|+|++++++                     |++++|+++++|+
T Consensus       404 -----~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~va~---------------------~~~~~G~i~~~D~  457 (645)
T 3j08_A          404 -----DGILVGNKRLMEDFGVAVSNEVELALEKLEREAKTAVIVAR---------------------NGRVEGIIAVSDT  457 (645)
T ss_dssp             -----TTEEEECHHHHHHTTCCCCHHHHHHHHHHHTTTCCCEEEEE---------------------TTEEEEEEEEECC
T ss_pred             -----EEEEECCHHHHHhcCCCccHHHHHHHHHHHhcCCeEEEEEE---------------------CCEEEEEEEecCC
Confidence                 14678999999887777788899999999999999999994                     6799999999999


Q ss_pred             CCcchHHHHHHHhhCCCcEEEEcCCCHHHHHHHHHHcccccCCcEEEecCCCCCeeEEeCCCcccccccchhhhhccCCC
Q 003952          675 IREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLILCPVKNGKVYEWVSPDETEKIQYSEKEVEGLTDA  754 (784)
Q Consensus       675 lr~da~~~I~~L~~agi~v~MITGDn~~TA~~VA~~~gI~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~  754 (784)
                      +||+++++|+.|+++|++++|+|||+..+|.++|+++||......+.             +++      |...+++++++
T Consensus       458 l~~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~lgi~~~~~~~~-------------P~~------K~~~v~~l~~~  518 (645)
T 3j08_A          458 LKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLDLVIAEVL-------------PHQ------KSEEVKKLQAK  518 (645)
T ss_dssp             CTTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCSEEECSCC-------------TTC------HHHHHHHHTTT
T ss_pred             chhHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCCEEEEeCC-------------HHh------HHHHHHHHhhC
Confidence            99999999999999999999999999999999999999963211111             111      34455666666


Q ss_pred             eeEEEechhHHHH
Q 003952          755 HDLCIGGDCFEML  767 (784)
Q Consensus       755 ~~l~~tGd~l~~l  767 (784)
                      ..++|+|||.|++
T Consensus       519 ~~v~~vGDg~ND~  531 (645)
T 3j08_A          519 EVVAFVGDGINDA  531 (645)
T ss_dssp             CCEEEEECSSSCH
T ss_pred             CeEEEEeCCHhHH
Confidence            6799999999876


No 8  
>3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus}
Probab=100.00  E-value=1.2e-61  Score=577.83  Aligned_cols=448  Identities=20%  Similarity=0.227  Sum_probs=348.9

Q ss_pred             HHHHHHHhhhhcccchhhhh--HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh-CCceEEEEEcCeEEEeecCCCCCCcE
Q 003952          202 FFVFQVFCVGLWCLDEYWYY--SLFTLFMLFMFESTMAKSRLKTLTEIRRVRV-DNQTIMVHRCGKWVKLAGTDLVPGDV  278 (784)
Q Consensus       202 f~vfqi~~~~lw~l~~y~~~--~~~~l~~l~~~~~~~~~~~~~~~~~l~~~~~-~~~~v~V~R~g~~~~I~s~~LvpGDi  278 (784)
                      .|++++++++.|..++|+||  +.++++++.+......+.+.|+.+.++++.. .|..++|+|||+|++|+++||+|||+
T Consensus       155 a~~~s~~~~~~~~~~~~~~~~~~~~i~~~~~ig~~le~~~~~~~~~~i~~l~~l~~~~a~v~r~g~~~~i~~~~l~~GDi  234 (723)
T 3j09_A          155 AFLASVLSTAGVLPREYSFYETSVLLLAFLLLGRTLEARAKSRTGEAIKKLVGLQAKTAVVIRDGKEIAVPVEEVAVGDI  234 (723)
T ss_dssp             HHHHHHHHHHTTTTCCCCCCTTHHHHHHHHHHHHHHHHHHHTTCCCTTHHHHHTSCSEEEEEETTEEEEEEGGGCCTTCE
T ss_pred             HHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeeEEEECCEEEEEEHHHCCCCCE
Confidence            45677777777776775333  4445555555555556666555445555433 58899999999999999999999999


Q ss_pred             EEEcCCCCCCCCCCeecceeeEeeCeeEeeccCCCCCCcceeeccccCCCCccccccccCCCeeEEeeeeEeecCCCCCc
Q 003952          279 VSIGRSSGQTGEDKSVPADMLILGGSAIVNEAILTGESTPQWKVSIMGRETGEKLSARRDKSHVLFGGTKILQHTPDKTF  358 (784)
Q Consensus       279 V~i~~ge~d~~~~~~vPaD~ill~G~~~VdES~LTGES~Pv~K~~~~~~~~~~~~~~~~~~~~~lf~GT~v~~~~~~~~~  358 (784)
                      |.|++|+       +|||||+|++|++.||||+|||||.|+.|.+                ++.+|+||.+.        
T Consensus       235 v~v~~Ge-------~IPaDg~vl~G~~~VdeS~LTGES~pv~K~~----------------g~~v~~Gt~~~--------  283 (723)
T 3j09_A          235 VIVRPGE-------KIPVDGVVVEGESYVDESMISGEPVPVLKSK----------------GDEVFGATINN--------  283 (723)
T ss_dssp             EEECTTC-------BCCSEEEEEECCEEEECHHHHCCSSCEEECT----------------TCEECTTCEEC--------
T ss_pred             EEECCCC-------EEeeEEEEEECCeEEecccccCCCcceeecC----------------CCeeccceEEe--------
Confidence            9999887       9999999999999999999999999999986                88999999999        


Q ss_pred             CCCCCCCceEEEEEeeccccchhHHHHHhcccccccccchh----HHHHHHHHHHHHHHHHhhheeecCcCCccchhHHH
Q 003952          359 PLKTPDGGCLAVVLRTGFETSQGKLMRTILFSTERVTANSW----ESGLFILFLVVFAVIAAGYVLKKGMEDPTRSKYKL  434 (784)
Q Consensus       359 ~~~~~~g~~~~~V~~TG~~T~~gkl~~~i~~~~~~~~~~~~----~~~~fi~~ll~~aii~~~~~~~~~~~~~~~~~~~~  434 (784)
                           +|.+.++|++||.+|..|++++.+..++.++++.++    .+.+|+.++++++++++.+|+..+    ..++...
T Consensus       284 -----~g~~~~~v~~~g~~T~l~~i~~lv~~a~~~k~~~~~~~d~~~~~~~~~vl~~a~~~~~~~~~~~----~~~~~~~  354 (723)
T 3j09_A          284 -----TGVLKIRATRVGGETLLAQIVKLVEDAMGSKPPIQRLADKVVAYFIPTVLLVAISAFIYWYFIA----HAPLLFA  354 (723)
T ss_dssp             -----SSCEEEEEEECGGGSHHHHHHHHHSSSCCSCCHHHHHHHHHHHHHHHHHHHHHHHHHTTSCSST----TCTTCCS
T ss_pred             -----cCcEEEEEEEecCccHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc----CCcHHHH
Confidence                 899999999999999999999999888777766544    345666666777777666665432    1234455


Q ss_pred             HHHHHhhhhcccCCcchHHHHHHHHHHHHHHHhcCceecCCCCcCcCCceeEEEecccCcccCCceEEEEEEecCCCccc
Q 003952          435 FLSCSLIITSVIPPELPMELSIAVNTSLIALARRGIFCTEPFRIPFAGKVDMCCFDKTGTLTSDDMEFRGVVGLSNAELE  514 (784)
Q Consensus       435 ~l~~i~ii~~~vP~~Lp~~lslav~~s~~~l~k~~I~~~~~~~ie~lG~vd~icfDKTGTLT~~~m~v~~i~~~~~~~~~  514 (784)
                      +..++.+++.+|||+||+++++++..++.+++|+||+||++.++|.+|++|++|||||||||+|+|+|.++...+.+   
T Consensus       355 ~~~~i~vlvia~P~aL~la~p~a~~~~~~~~a~~gilvk~~~~lE~lg~v~~i~fDKTGTLT~g~~~v~~~~~~~~~---  431 (723)
T 3j09_A          355 FTTLIAVLVVACPCAFGLATPTALTVGMGKGAELGILIKNADALEVAEKVTAVIFDKTGTLTKGKPEVTDLVPLNGD---  431 (723)
T ss_dssp             HHHHHHHHHHHSCTTHHHHHHHHHHHHHHHHHTTTCEESSTTHHHHGGGCCEEEEEHHHHTSCSCCEEEEEEESSSC---
T ss_pred             HHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHCCeEEeChHHHHHhhcCCEEEEcCCCccccCceEEEEEEeCCCC---
Confidence            77788899999999999999999999999999999999999999999999999999999999999999999876421   


Q ss_pred             cCCCCCcHHHHHHHHhccceEeeCCcccCCHHHHHHHhccCccccCCCccccCCCCCcceeEEEEEccCCCCCeeEEEEE
Q 003952          515 DDMTKVPVRTQEILASCHALVFVDNKLVGDPLEKAALKGIDWSYKSDEKAMPKRGGGNAVQIVQRHHFASHLKRMSVVVR  594 (784)
Q Consensus       515 ~~~~~~~~~~~~~la~chsl~~~~~~~~gdple~All~~~~~~~~~~~~~~~~~~~~~~~~il~~~~Fss~~krmsviv~  594 (784)
                            ..+.....+.+..       .+.||+++|+++++...-   ....    ...        +|.+...+ ++.. 
T Consensus       432 ------~~~~l~~aa~~e~-------~s~hP~~~Ai~~~a~~~~---~~~~----~~~--------~~~~~~g~-g~~~-  481 (723)
T 3j09_A          432 ------ERELLRLAAIAER-------RSEHPIAEAIVKKALEHG---IELG----EPE--------KVEVIAGE-GVVA-  481 (723)
T ss_dssp             ------HHHHHHHHHHHHT-------TCCSHHHHHHHHHHHHTT---CCCC----SCC--------CCEEETTT-EEEE-
T ss_pred             ------HHHHHHHHHHHhc-------cCCCchhHHHHHHHHhcC---CCcC----Ccc--------ceEEecCC-ceEE-
Confidence                  1223333333322       257999999998763110   0000    000        11111111 2222 


Q ss_pred             ECCEEEEEEeCchHHHHHhhccCchhHHHHHHHHhhccCeEEEEEEEeCCCCChhhHhhhhhhhccCCcEEEEEEeecCC
Q 003952          595 VQEEFFAFVKGAPETIQDRLTDLPSSYIETYKKYTHQGSRVLALAFKSLPDMTVSDARSLHRDEVENGLTFAGFAVFNCP  674 (784)
Q Consensus       595 ~~~~~~~~~KGapE~I~~~~~~~p~~~~~~~~~~~~~G~Rvlala~k~l~~~~~~~~~~~~r~~~E~~l~flG~l~~~d~  674 (784)
                           ..+.+|+++.+.+.....++.+.+.++.++.+|+|++++|                     .|++|+|+++++|+
T Consensus       482 -----~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~va---------------------~~~~~~G~i~i~D~  535 (723)
T 3j09_A          482 -----DGILVGNKRLMEDFGVAVSNEVELALEKLEREAKTAVIVA---------------------RNGRVEGIIAVSDT  535 (723)
T ss_dssp             -----TTEEEECHHHHHHTTCCCCHHHHHHHHHHHTTTCEEEEEE---------------------ETTEEEEEEEEECC
T ss_pred             -----EEEEECCHHHHHhcCCCccHHHHHHHHHHHhcCCeEEEEE---------------------ECCEEEEEEeecCC
Confidence                 1467899999988777778889999999999999999999                     46799999999999


Q ss_pred             CCcchHHHHHHHhhCCCcEEEEcCCCHHHHHHHHHHcccccCCcEEEecCCCCCeeEEeCCCcccccccchhhhhccCCC
Q 003952          675 IREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLILCPVKNGKVYEWVSPDETEKIQYSEKEVEGLTDA  754 (784)
Q Consensus       675 lr~da~~~I~~L~~agi~v~MITGDn~~TA~~VA~~~gI~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~  754 (784)
                      +||+++++|+.|+++|++++|+|||+..||.++|+++||......+.             +++      |...+++++++
T Consensus       536 ~~~~~~~~i~~l~~~Gi~v~~~TGd~~~~a~~ia~~lgi~~~~~~~~-------------P~~------K~~~v~~l~~~  596 (723)
T 3j09_A          536 LKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLDLVIAEVL-------------PHQ------KSEEVKKLQAK  596 (723)
T ss_dssp             SCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCSEEECSCC-------------TTC------HHHHHHHHTTT
T ss_pred             cchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCcEEEccCC-------------HHH------HHHHHHHHhcC
Confidence            99999999999999999999999999999999999999963211111             111      44456666666


Q ss_pred             eeEEEechhHHHH
Q 003952          755 HDLCIGGDCFEML  767 (784)
Q Consensus       755 ~~l~~tGd~l~~l  767 (784)
                      ..++|+|||.|++
T Consensus       597 ~~v~~vGDg~ND~  609 (723)
T 3j09_A          597 EVVAFVGDGINDA  609 (723)
T ss_dssp             CCEEEEECSSTTH
T ss_pred             CeEEEEECChhhH
Confidence            6799999999976


No 9  
>2hc8_A PACS, cation-transporting ATPase, P-type; copper, COPA, COPB, actuator, transport protein; 1.65A {Archaeoglobus fulgidus} PDB: 2voy_F
Probab=99.93  E-value=2.9e-26  Score=207.87  Aligned_cols=110  Identities=23%  Similarity=0.369  Sum_probs=101.1

Q ss_pred             HHHHHHhhhhCCceEEEEEcCeEEEeecCCCCCCcEEEEcCCCCCCCCCCeecceeeEeeCeeEeeccCCCCCCcceeec
Q 003952          243 TLTEIRRVRVDNQTIMVHRCGKWVKLAGTDLVPGDVVSIGRSSGQTGEDKSVPADMLILGGSAIVNEAILTGESTPQWKV  322 (784)
Q Consensus       243 ~~~~l~~~~~~~~~v~V~R~g~~~~I~s~~LvpGDiV~i~~ge~d~~~~~~vPaD~ill~G~~~VdES~LTGES~Pv~K~  322 (784)
                      ++++|.++.  |..++|+|+|+|++|++++|+|||+|.|++|+       +|||||+|++|++.||||+|||||.|+.|.
T Consensus         2 al~~L~~l~--p~~a~v~r~g~~~~i~~~~l~~GDiv~v~~G~-------~iPaDg~v~~g~~~vdeS~LTGEs~pv~k~   72 (113)
T 2hc8_A            2 AIKKLVGLQ--AKTAVVIRDGKEIAVPVEEVAVGDIVIVRPGE-------KIPVDGVVVEGESYVDESMISGEPVPVLKS   72 (113)
T ss_dssp             HHHHHHHHS--CSEEEEEETTEEEEEEGGGCCTTCEEEECTTC-------BCCSEEEEEECCEEEECHHHHCCSSCEEEC
T ss_pred             HHHHHhcCC--CCEEEEEECCEEEEEEHHHCCCCCEEEECCCC-------EEeeeEEEEEceEEEEccccCCCCccEEEC
Confidence            345666654  78999999999999999999999999999887       999999999999999999999999999998


Q ss_pred             cccCCCCccccccccCCCeeEEeeeeEeecCCCCCcCCCCCCCceEEEEEeeccccchhHHHHHhccc
Q 003952          323 SIMGRETGEKLSARRDKSHVLFGGTKILQHTPDKTFPLKTPDGGCLAVVLRTGFETSQGKLMRTILFS  390 (784)
Q Consensus       323 ~~~~~~~~~~~~~~~~~~~~lf~GT~v~~~~~~~~~~~~~~~g~~~~~V~~TG~~T~~gkl~~~i~~~  390 (784)
                      +                ++.+|+||.+.             +|.+.++|++||.+|..|++++++..+
T Consensus        73 ~----------------g~~v~aGt~~~-------------~G~~~~~V~~~g~~T~~~~i~~lv~~a  111 (113)
T 2hc8_A           73 K----------------GDEVFGATINN-------------TGVLKIRATRVGGETLLAQIVKLVEDA  111 (113)
T ss_dssp             T----------------TCEECTTCEEC-------------SSCEEEEEEECGGGSHHHHHHHHHHHH
T ss_pred             C----------------CCEEEeCCEEe-------------eceEEEEEEEecCcCHHHHHHHHHHHh
Confidence            6                78999999999             899999999999999999999987543


No 10 
>2kij_A Copper-transporting ATPase 1; actuator, menkes disease, alternative splicing, ATP-binding, cell membrane, cytoplasm, disease mutation; NMR {Homo sapiens}
Probab=99.91  E-value=6.1e-25  Score=202.73  Aligned_cols=111  Identities=16%  Similarity=0.302  Sum_probs=100.3

Q ss_pred             HHHHHHHhhhhCCceEEEEEcCe------EEEeecCCCCCCcEEEEcCCCCCCCCCCeecceeeEeeCeeEeeccCCCCC
Q 003952          242 KTLTEIRRVRVDNQTIMVHRCGK------WVKLAGTDLVPGDVVSIGRSSGQTGEDKSVPADMLILGGSAIVNEAILTGE  315 (784)
Q Consensus       242 ~~~~~l~~~~~~~~~v~V~R~g~------~~~I~s~~LvpGDiV~i~~ge~d~~~~~~vPaD~ill~G~~~VdES~LTGE  315 (784)
                      +++++|.++  .|..++|+|+|+      +++|++++|+|||+|.|++|+       +|||||+|++|++.||||+||||
T Consensus         7 ~~l~~L~~l--~p~~a~v~r~g~~~~~~~~~~v~~~~l~~GDiv~v~~G~-------~iPaDg~vi~g~~~vdeS~LTGE   77 (124)
T 2kij_A            7 EALAKLISL--QATEATIVTLDSDNILLSEEQVDVELVQRGDIIKVVPGG-------KFPVDGRVIEGHSMVDESLITGE   77 (124)
T ss_dssp             CHHHHHHHT--CCSEEEEEECSSSTTCCEEEEEETTTCCTTCEEECCTTC-------BCSSCEEECSCCCEEECTTTTCC
T ss_pred             HHHHHHhcc--CCCEEEEEECCCCCceeEEEEEeHHHCCCCCEEEECCCC-------EEEeeEEEEEccEEEEeccccCC
Confidence            445566555  488999999764      789999999999999999887       99999999999999999999999


Q ss_pred             CcceeeccccCCCCccccccccCCCeeEEeeeeEeecCCCCCcCCCCCCCceEEEEEeeccccchhHHHHHhccc
Q 003952          316 STPQWKVSIMGRETGEKLSARRDKSHVLFGGTKILQHTPDKTFPLKTPDGGCLAVVLRTGFETSQGKLMRTILFS  390 (784)
Q Consensus       316 S~Pv~K~~~~~~~~~~~~~~~~~~~~~lf~GT~v~~~~~~~~~~~~~~~g~~~~~V~~TG~~T~~gkl~~~i~~~  390 (784)
                      |.|+.|.+                ++.+|+||.+.             +|.+.++|++||.+|.+|++++++..+
T Consensus        78 s~pv~k~~----------------g~~v~aGt~~~-------------~G~~~~~v~~~g~~T~~~~I~~lv~~a  123 (124)
T 2kij_A           78 AMPVAKKP----------------GSTVIAGSINQ-------------NGSLLICATHVGADTTLSQIVKLVEEA  123 (124)
T ss_dssp             SSCEECCT----------------TEEECTTCEEE-------------SSCCEEEECSCTTTCHHHHHHHHTTTT
T ss_pred             CccEEeCC----------------CCEEEcCCEEe-------------eeEEEEEEEEecccCHHHHHHHHHHhh
Confidence            99999986                89999999999             899999999999999999999988654


No 11 
>2yj3_A Copper-transporting ATPase; hydrolase, P-type ATPase, COPB, heavy metal translocation; 2.20A {Sulfolobus solfataricus} PDB: 2iye_A 2yj6_A* 2yj5_A* 2yj4_A*
Probab=99.62  E-value=5.2e-20  Score=193.48  Aligned_cols=208  Identities=16%  Similarity=0.159  Sum_probs=132.2

Q ss_pred             HHHHHHHhcCceecCCCCcCcCCceeEEEecccCcccCCceEEEEEEecCCCccccCCCCCcHHHHHHHHhccceEeeCC
Q 003952          460 TSLIALARRGIFCTEPFRIPFAGKVDMCCFDKTGTLTSDDMEFRGVVGLSNAELEDDMTKVPVRTQEILASCHALVFVDN  539 (784)
Q Consensus       460 ~s~~~l~k~~I~~~~~~~ie~lG~vd~icfDKTGTLT~~~m~v~~i~~~~~~~~~~~~~~~~~~~~~~la~chsl~~~~~  539 (784)
                      .++.+++|+||++|++..+|.++++|++|||||||||+|++.+..+.  +..              .++....++.    
T Consensus         4 ~a~~~~~~~gil~k~~~~le~l~~i~~v~fDktGTLT~g~~~v~~~~--~~~--------------~~l~~~~~~e----   63 (263)
T 2yj3_A            4 SLYEKMLHKGMIIKNSNVYEKIKEIDTIIFEKTGTLTYGTPIVTQFI--GDS--------------LSLAYAASVE----   63 (263)
Confidence            46778999999999999999999999999999999999999998874  111              1222222222    


Q ss_pred             cccCCHHHHHHHhccCccccCCCccccCCCCCcceeEEEEEccCCCCCeeEEEEEECCEEEEEEeCchHHHHHhhccCch
Q 003952          540 KLVGDPLEKAALKGIDWSYKSDEKAMPKRGGGNAVQIVQRHHFASHLKRMSVVVRVQEEFFAFVKGAPETIQDRLTDLPS  619 (784)
Q Consensus       540 ~~~gdple~All~~~~~~~~~~~~~~~~~~~~~~~~il~~~~Fss~~krmsviv~~~~~~~~~~KGapE~I~~~~~~~p~  619 (784)
                      ..+.||+.+|+.+++...    .           +.....-.|..-. ..++.....+.  .+..|+++           
T Consensus        64 ~~s~hp~a~ai~~~~~~~----g-----------~~~~~~~~~~~~~-G~g~~~~~~~~--~~~~G~~~-----------  114 (263)
T 2yj3_A           64 ALSSHPIAKAIVKYAKEQ----G-----------VKILEVKDFKEIS-GIGVRGKISDK--IIEVKKAE-----------  114 (263)
Confidence            125699999988765311    0           0000000000000 00110100110  11123222           


Q ss_pred             hHHHHHHHHhhccCeEEEEEEEeCCCCChhhHhhhhhhhccCCcEEEEEEeecCCCCcchHHHHHHHhhCCCcEEEEcCC
Q 003952          620 SYIETYKKYTHQGSRVLALAFKSLPDMTVSDARSLHRDEVENGLTFAGFAVFNCPIREDSAKILSELKNSSQDLAMITGD  699 (784)
Q Consensus       620 ~~~~~~~~~~~~G~Rvlala~k~l~~~~~~~~~~~~r~~~E~~l~flG~l~~~d~lr~da~~~I~~L~~agi~v~MITGD  699 (784)
                                 +|.+ +.++                     .+-.+.|.+.+.++++|+++++|+.|++.|++++|+|||
T Consensus       115 -----------~~~~-~~~~---------------------~~~~~~~~~~~~~~~~~g~~~~l~~L~~~g~~~~i~T~~  161 (263)
T 2yj3_A          115 -----------NNND-IAVY---------------------INGEPIASFNISDVPRPNLKDYLEKLKNEGLKIIILSGD  161 (263)
Confidence                       2333 3333                     344689999999999999999999999999999999999


Q ss_pred             CHHHHHHHHHHcccccCCcEEEecCCCCCeeEEeCCCcccccccchhhhhccCCC-eeEEEechhHHHHh
Q 003952          700 QALTACYVASQVHIVTKPVLILCPVKNGKVYEWVSPDETEKIQYSEKEVEGLTDA-HDLCIGGDCFEMLQ  768 (784)
Q Consensus       700 n~~TA~~VA~~~gI~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~l~~tGd~l~~l~  768 (784)
                      +..++..+++++||.+....+++..                   +...+++++.+ ..++|+||+.+.+.
T Consensus       162 ~~~~~~~~~~~~gl~~~f~~~~p~~-------------------k~~~~~~l~~~~~~~~~VGD~~~D~~  212 (263)
T 2yj3_A          162 KEDKVKELSKELNIQEYYSNLSPED-------------------KVRIIEKLKQNGNKVLMIGDGVNDAA  212 (263)
Confidence            9999999999999965444443211                   11112223222 35888999887764


No 12 
>3gwi_A Magnesium-transporting ATPase, P-type 1; P-type ATPase, nucleotide binding, ATP binding, MGTA, membra protein, cell inner membrane; 1.60A {Escherichia coli}
Probab=99.69  E-value=8.8e-17  Score=156.84  Aligned_cols=120  Identities=28%  Similarity=0.300  Sum_probs=93.7

Q ss_pred             cCCHHHHHHHhccCccccCCCccccCCCCCcceeEEEEEccCCCCCeeEEEEEEC-CEEEEEEeCchHHHHHhhccC---
Q 003952          542 VGDPLEKAALKGIDWSYKSDEKAMPKRGGGNAVQIVQRHHFASHLKRMSVVVRVQ-EEFFAFVKGAPETIQDRLTDL---  617 (784)
Q Consensus       542 ~gdple~All~~~~~~~~~~~~~~~~~~~~~~~~il~~~~Fss~~krmsviv~~~-~~~~~~~KGapE~I~~~~~~~---  617 (784)
                      .+||+|.|+++++...-     .   ......+++++.+||+|++|||||+++.. +++++++|||||.|+++|..+   
T Consensus        32 ~~n~~d~Ail~~~~~~~-----~---~~~~~~~~~~~eiPFds~rKrmsvv~~~~~g~~~l~~KGApE~IL~~C~~~~~~  103 (170)
T 3gwi_A           32 LKNLLDTAVLEGTDEES-----A---RSLASRWQKIDEIPFDFERRRMSVVVAENTEHHQLVCKGALQEILNVCSQVRHN  103 (170)
T ss_dssp             CCCHHHHHHHHTSCHHH-----H---HHHHHHSEEEEEECCCTTTCEEEEEEESSSSEEEEEEEECHHHHHTTEEEEEET
T ss_pred             CCChHHHHHHHHHHhcC-----h---hhhhhcCeEEeeEecCcccCcEEEEEEeCCCCEEEEEcCCcHHHHHHhHHHhcC
Confidence            47999999999864210     0   00124588999999999999999999864 578899999999999999642   


Q ss_pred             ----------chhHHHHHHHHhhccCeEEEEEEEeCCCCChhhHhhhhhhhccCCcEEEEEEeecCC
Q 003952          618 ----------PSSYIETYKKYTHQGSRVLALAFKSLPDMTVSDARSLHRDEVENGLTFAGFAVFNCP  674 (784)
Q Consensus       618 ----------p~~~~~~~~~~~~~G~Rvlala~k~l~~~~~~~~~~~~r~~~E~~l~flG~l~~~d~  674 (784)
                                .+.+.+.++.|+++|+||||+|||.++....    ... .+.|+||+|+|+++|-|.
T Consensus       104 g~~~~l~~~~~~~i~~~~~~la~~GlRvLavA~k~~~~~~~----~~~-~~~E~~L~f~G~~g~~~~  165 (170)
T 3gwi_A          104 GEIVPLDDIMLRKIKRVTDTLNRQGLRVVAVATKYLPAREG----DYQ-RADESDLILEGYIAFLDH  165 (170)
T ss_dssp             TEEEECCHHHHHHHHHHHHHHHHTTCEEEEEEEEEEECCSS----CCC-GGGSCSEEEEEEEEEEC-
T ss_pred             CCcccCCHHHHHHHHHHHHHHHhCCCEEEEEEEEECCCCcc----ccC-ccccCCcEEEehhccccc
Confidence                      2467788999999999999999999965321    112 246999999999999874


No 13 
>3a1c_A Probable copper-exporting P-type ATPase A; ATP-binding, cell membrane, copper transport, hydrolase, ION transport, magnesium, membrane; HET: ACP; 1.85A {Archaeoglobus fulgidus} PDB: 3a1d_A* 3a1e_A* 2b8e_A 2voy_J 2voy_I
Probab=99.69  E-value=1e-16  Score=170.42  Aligned_cols=194  Identities=21%  Similarity=0.227  Sum_probs=141.8

Q ss_pred             HHHHHHhcCceecCCCCcCcCCceeEEEecccCcccCCceEEEEEEecCCCccccCCCCCcHHHHHHHHhccceEeeCCc
Q 003952          461 SLIALARRGIFCTEPFRIPFAGKVDMCCFDKTGTLTSDDMEFRGVVGLSNAELEDDMTKVPVRTQEILASCHALVFVDNK  540 (784)
Q Consensus       461 s~~~l~k~~I~~~~~~~ie~lG~vd~icfDKTGTLT~~~m~v~~i~~~~~~~~~~~~~~~~~~~~~~la~chsl~~~~~~  540 (784)
                      +..+++|+||+++++..+|.+++++++|||||||||.+.+.+..+...++          ..  ..++..|+++.    .
T Consensus         9 ~~~~~~~~gilik~~~~le~l~~i~~viFD~dGTL~ds~~~~~~~~~~~~----------~~--~~~l~~~~~~e----~   72 (287)
T 3a1c_A            9 GSRKGAELGILIKNADALEVAEKVTAVIFDKTGTLTKGKPEVTDLVPLNG----------DE--RELLRLAAIAE----R   72 (287)
T ss_dssp             -----CCCCEEECSTTHHHHHHHCCEEEEECCCCCBCSCCEEEEEEESSS----------CH--HHHHHHHHHHT----T
T ss_pred             hHHHHHHCCEEEeCcHHHHHhhcCCEEEEeCCCCCcCCCEEEEEEEeCCC----------CH--HHHHHHHHHHh----h
Confidence            45678999999999999999999999999999999999999998876543          11  22344455543    3


Q ss_pred             ccCCHHHHHHHhccCc-cccCCCccccCCCCCcceeEEEEEccCCCCCeeEEEEEECCEEEEEEeCchHHHHHhhccCch
Q 003952          541 LVGDPLEKAALKGIDW-SYKSDEKAMPKRGGGNAVQIVQRHHFASHLKRMSVVVRVQEEFFAFVKGAPETIQDRLTDLPS  619 (784)
Q Consensus       541 ~~gdple~All~~~~~-~~~~~~~~~~~~~~~~~~~il~~~~Fss~~krmsviv~~~~~~~~~~KGapE~I~~~~~~~p~  619 (784)
                      .+.||++.|+.+++.. .+....        ...+   ..+      ..+++..   .   .+.+|+++.+.+.....|+
T Consensus        73 ~s~hp~~~a~~~~~~~~g~~~~~--------~~~~---~~~------~G~~~~~---~---~~~~g~~~~~~~~~~~~~~  129 (287)
T 3a1c_A           73 RSEHPIAEAIVKKALEHGIELGE--------PEKV---EVI------AGEGVVA---D---GILVGNKRLMEDFGVAVSN  129 (287)
T ss_dssp             TCCSHHHHHHHHHHHHTTCCCCC--------CSCE---EEE------TTTEEEE---T---TEEEECHHHHHHTTCCCCH
T ss_pred             cCCCHHHHHHHHHHHhcCCCccc--------cccc---eee------cCCCeEE---E---EEEECCHHHHHhcCCCccH
Confidence            3689999999876521 010000        0001   111      0112211   1   3557888877665555556


Q ss_pred             hHHHHHHHHhhccCeEEEEEEEeCCCCChhhHhhhhhhhccCCcEEEEEEeecCCCCcchHHHHHHHhhCCCcEEEEcCC
Q 003952          620 SYIETYKKYTHQGSRVLALAFKSLPDMTVSDARSLHRDEVENGLTFAGFAVFNCPIREDSAKILSELKNSSQDLAMITGD  699 (784)
Q Consensus       620 ~~~~~~~~~~~~G~Rvlala~k~l~~~~~~~~~~~~r~~~E~~l~flG~l~~~d~lr~da~~~I~~L~~agi~v~MITGD  699 (784)
                      .+.+..+.+..+|.+++++++                     +..+.|.+...++++|++.++|+.|++.|+++.++||+
T Consensus       130 ~~~~~~~~~~~~g~~~i~~~~---------------------d~~~~~~~~~~~~~~~g~~~~l~~L~~~g~~~~i~T~~  188 (287)
T 3a1c_A          130 EVELALEKLEREAKTAVIVAR---------------------NGRVEGIIAVSDTLKESAKPAVQELKRMGIKVGMITGD  188 (287)
T ss_dssp             HHHHHHHHHHHTTCEEEEEEE---------------------TTEEEEEEEEECCBCTTHHHHHHHHHHTTCEEEEECSS
T ss_pred             HHHHHHHHHHhCCCeEEEEEE---------------------CCEEEEEEEeccccchhHHHHHHHHHHCCCeEEEEeCC
Confidence            677778889999999999984                     45789999999999999999999999999999999999


Q ss_pred             CHHHHHHHHHHcccc
Q 003952          700 QALTACYVASQVHIV  714 (784)
Q Consensus       700 n~~TA~~VA~~~gI~  714 (784)
                      +...+..+++.+|+.
T Consensus       189 ~~~~~~~~l~~~gl~  203 (287)
T 3a1c_A          189 NWRSAEAISRELNLD  203 (287)
T ss_dssp             CHHHHHHHHHHHTCS
T ss_pred             CHHHHHHHHHHhCCc
Confidence            999999999999985


No 14 
>3skx_A Copper-exporting P-type ATPase B; P1B-ATPase, ATP binding domain, copper(II) transporter, MEMB protein, hydrolase; 1.59A {Archaeoglobus fulgidus} PDB: 3sky_A*
Probab=99.45  E-value=4.1e-13  Score=140.74  Aligned_cols=219  Identities=21%  Similarity=0.204  Sum_probs=144.3

Q ss_pred             ecCCCCcCcCCceeEEEecccCcccCCceEEEEEEecCCCccccCCCCCcHHHHHHHHhccceEeeCCcccCCHHHHHHH
Q 003952          472 CTEPFRIPFAGKVDMCCFDKTGTLTSDDMEFRGVVGLSNAELEDDMTKVPVRTQEILASCHALVFVDNKLVGDPLEKAAL  551 (784)
Q Consensus       472 ~~~~~~ie~lG~vd~icfDKTGTLT~~~m~v~~i~~~~~~~~~~~~~~~~~~~~~~la~chsl~~~~~~~~gdple~All  551 (784)
                      +|++..+|.+++++.+|||++||||.|++.|.++...++.         ......+++.+..       ...+|...++.
T Consensus         1 ~k~~~~~e~~~~ik~i~FD~DGTL~d~~~~v~~~~~~~~~---------~~~~~~~~~~~~~-------~s~~~~~~a~~   64 (280)
T 3skx_A            1 MRDRQAFERAKDLQAVIFDKTGTLTEGRFGVTDIVGFNHS---------EDELLQIAASLEA-------RSEHPIAAAIV   64 (280)
T ss_dssp             ----CHHHHGGGCCEEEEECCCCCEEEEEEEEEEEESSSC---------HHHHHHHHHHHHT-------TCCSHHHHHHH
T ss_pred             CCChHHHHHhcCCCEEEEeCCCcCCCCcEEEEEEEecCCC---------HHHHHHHHHHhhc-------cCCCHHHHHHH
Confidence            4678899999999999999999999999999999876431         1233333333322       13578888877


Q ss_pred             hccCccccCCCccccCCCCCcceeEEEEEccCCCCCeeEEEEEECCEEEEEEeCchHHHHHhhccCchhHHHHHHHHhhc
Q 003952          552 KGIDWSYKSDEKAMPKRGGGNAVQIVQRHHFASHLKRMSVVVRVQEEFFAFVKGAPETIQDRLTDLPSSYIETYKKYTHQ  631 (784)
Q Consensus       552 ~~~~~~~~~~~~~~~~~~~~~~~~il~~~~Fss~~krmsviv~~~~~~~~~~KGapE~I~~~~~~~p~~~~~~~~~~~~~  631 (784)
                      +.+... ..     +.    ...+.+..++      ..++....++.  .+..|+++.+.+.....+..    ...+..+
T Consensus        65 ~~~~~~-g~-----~~----~~~~~~~~~~------g~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~----~~~~~~~  122 (280)
T 3skx_A           65 EEAEKR-GF-----GL----TEVEEFRAIP------GKGVEGIVNGR--RYMVVSPGYIRELGIKTDES----VEKLKQQ  122 (280)
T ss_dssp             HHHHHT-TC-----CC----CCCEEEEEET------TTEEEEEETTE--EEEEECHHHHHHTTCCCCTT----HHHHHTT
T ss_pred             HHHHhc-CC-----CC----CCccceeecC------CCEEEEEECCE--EEEEecHHHHHHcCCCchHH----HHHHHhC
Confidence            655210 00     00    0111122221      11222333443  34568888888776555433    4456788


Q ss_pred             cCeEEEEEEEeCCCCChhhHhhhhhhhccCCcEEEEEEeecCCCCcchHHHHHHHhhCCCcEEEEcCCCHHHHHHHHHHc
Q 003952          632 GSRVLALAFKSLPDMTVSDARSLHRDEVENGLTFAGFAVFNCPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQV  711 (784)
Q Consensus       632 G~Rvlala~k~l~~~~~~~~~~~~r~~~E~~l~flG~l~~~d~lr~da~~~I~~L~~agi~v~MITGDn~~TA~~VA~~~  711 (784)
                      +.+++.+++                     +..++|.+.+.++++|++.++++.|++.|+++.|+||++...+..+++++
T Consensus       123 ~~~~~~~~~---------------------~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~~~~~  181 (280)
T 3skx_A          123 GKTVVFILK---------------------NGEVSGVIALADRIRPESREAISKLKAIGIKCMMLTGDNRFVAKWVAEEL  181 (280)
T ss_dssp             TCEEEEEEE---------------------TTEEEEEEEEEEEECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHH
T ss_pred             CCeEEEEEE---------------------CCEEEEEEEecCCCCHhHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHc
Confidence            889888873                     45789999999999999999999999999999999999999999999999


Q ss_pred             ccccCCcEEEecCCCCCeeEEeCCCcccccccchhhhhccCCCeeEEEechhHHHHh
Q 003952          712 HIVTKPVLILCPVKNGKVYEWVSPDETEKIQYSEKEVEGLTDAHDLCIGGDCFEMLQ  768 (784)
Q Consensus       712 gI~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~tGd~l~~l~  768 (784)
                      |+......+.+.                   -+...++.+.+.++++|.||+.|.+.
T Consensus       182 gl~~~f~~~~~~-------------------~k~~~~k~~~~~~~~~~vGD~~nDi~  219 (280)
T 3skx_A          182 GLDDYFAEVLPH-------------------EKAEKVKEVQQKYVTAMVGDGVNDAP  219 (280)
T ss_dssp             TCSEEECSCCGG-------------------GHHHHHHHHHTTSCEEEEECTTTTHH
T ss_pred             CChhHhHhcCHH-------------------HHHHHHHHHHhcCCEEEEeCCchhHH
Confidence            985321111110                   02223334445567899999887763


No 15 
>4fe3_A Cytosolic 5'-nucleotidase 3; substrate complex, HAD-like, protein binding; HET: U5P; 1.74A {Mus musculus} PDB: 2g09_A* 2bdu_A* 2g08_A 2g06_A* 2g0a_A* 2q4t_A* 2g07_A* 2jga_A 2vkq_A 2cn1_A
Probab=98.88  E-value=2.2e-10  Score=121.95  Aligned_cols=97  Identities=10%  Similarity=0.100  Sum_probs=63.3

Q ss_pred             cCCCCcchHHHHHHHhhCCCcEEEEcCCCHHHHHHHHHHcccccCCcEEEecC---CCCCe-eEEeCC--Cccc--cccc
Q 003952          672 NCPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLILCPV---KNGKV-YEWVSP--DETE--KIQY  743 (784)
Q Consensus       672 ~d~lr~da~~~I~~L~~agi~v~MITGDn~~TA~~VA~~~gI~~~~~~il~~~---~~~~~-~~~~~~--~~~~--~~~~  743 (784)
                      ..++||+++++++.|+++|++++|+|||+..++.++|+++|+......+....   +++.. ..+...  +...  ....
T Consensus       139 ~i~l~~g~~e~i~~l~~~gi~v~ivSgg~~~~i~~i~~~~g~~~~~~~i~~n~l~~~~~~~~~~~~~~~i~~~~k~~~~~  218 (297)
T 4fe3_A          139 DVMLKEGYENFFGKLQQHGIPVFIFSAGIGDVLEEVIRQAGVYHSNVKVVSNFMDFDENGVLKGFKGELIHVFNKHDGAL  218 (297)
T ss_dssp             CCCBCBTHHHHHHHHHHTTCCEEEEEEEEHHHHHHHHHHTTCCCTTEEEEEECEEECTTSBEEEECSSCCCTTCHHHHHH
T ss_pred             CCCCCCcHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHHHcCCCcccceEEeeeEEEcccceeEeccccccchhhcccHHH
Confidence            47999999999999999999999999999999999999999976554444321   11111 111110  0000  0000


Q ss_pred             chhhhhccC-CCeeEEEechhHHHHh
Q 003952          744 SEKEVEGLT-DAHDLCIGGDCFEMLQ  768 (784)
Q Consensus       744 ~~~~~~~l~-~~~~l~~tGd~l~~l~  768 (784)
                      +.....+++ +...++|+|||+|.+-
T Consensus       219 k~~~~~~~~~~~~~v~~vGDGiNDa~  244 (297)
T 4fe3_A          219 KNTDYFSQLKDNSNIILLGDSQGDLR  244 (297)
T ss_dssp             TCHHHHHHTTTCCEEEEEESSGGGGG
T ss_pred             HHHHHHHhhccCCEEEEEeCcHHHHH
Confidence            112223344 3456999999999973


No 16 
>1svj_A Potassium-transporting ATPase B chain; alpha-beta sandwich, hydrolase; NMR {Escherichia coli} SCOP: d.220.1.1 PDB: 1u7q_A 2a00_A* 2a29_A*
Probab=98.69  E-value=4.9e-08  Score=93.12  Aligned_cols=138  Identities=12%  Similarity=0.163  Sum_probs=86.6

Q ss_pred             ccCcccCCceEEEEEEecCCCccccCCCCCcHHHHHHHHhccceEeeCCcccCCHHHHHHHhccCccccCCCccccCCCC
Q 003952          491 KTGTLTSDDMEFRGVVGLSNAELEDDMTKVPVRTQEILASCHALVFVDNKLVGDPLEKAALKGIDWSYKSDEKAMPKRGG  570 (784)
Q Consensus       491 KTGTLT~~~m~v~~i~~~~~~~~~~~~~~~~~~~~~~la~chsl~~~~~~~~gdple~All~~~~~~~~~~~~~~~~~~~  570 (784)
                      ..||+|-|+..+..+...++.         ..+..+.+|.  +++    ..+.||+.+|+++++.-...     ...   
T Consensus        13 ~~~tit~gnr~vt~v~~~~g~---------~e~elL~lAA--s~E----~~SeHPla~AIv~~A~~~~~-----l~~---   69 (156)
T 1svj_A           13 SSGHGGRHNRQASEFIPAQGV---------DEKTLADAAQ--LAS----LADETPEGRSIVILAKQRFN-----LRE---   69 (156)
T ss_dssp             --------CEEEEEEEECTTS---------CHHHHHHHHH--HTT----SSCCSHHHHHHHHHHHHHTT-----CCC---
T ss_pred             CCCceecCCCeEEEEEecCCC---------CHHHHHHHHH--HHh----CcCCCHHHHHHHHHHHHhcC-----CCc---
Confidence            469999999999999765431         1122222222  222    22579999999987642100     000   


Q ss_pred             Cccee--EEEEEccCCCCCeeEEEEEECCEEEEEEeCchHHHHHhh----ccCchhHHHHHHHHhhccCeEEEEEEEeCC
Q 003952          571 GNAVQ--IVQRHHFASHLKRMSVVVRVQEEFFAFVKGAPETIQDRL----TDLPSSYIETYKKYTHQGSRVLALAFKSLP  644 (784)
Q Consensus       571 ~~~~~--il~~~~Fss~~krmsviv~~~~~~~~~~KGapE~I~~~~----~~~p~~~~~~~~~~~~~G~Rvlala~k~l~  644 (784)
                       ...+  .....+|++.-++++|  ..+++  .+.+|+++.|.+++    ..+|+.+.+..+.++++|.+++++|     
T Consensus        70 -~~~~~~~~~~~~F~a~~G~~Gv--~v~G~--~v~vGn~~~i~~l~~~~gi~~~~~~~~~~~~la~~G~T~v~VA-----  139 (156)
T 1svj_A           70 -RDVQSLHATFVPFTAQSRMSGI--NIDNR--MIRKGSVDAIRRHVEANGGHFPTDVDQKVDQVARQGATPLVVV-----  139 (156)
T ss_dssp             -CCHHHHTCEEEEEETTTTEEEE--EETTE--EEEEEEHHHHHHHHHHHTCCCCHHHHHHHHHHHHTTCEEEEEE-----
T ss_pred             -ccccccccceeeccccCCCCeE--EECCE--EEEEeCcHHHHHHHHHcCCCCcHHHHHHHHHHHhCCCCEEEEE-----
Confidence             0000  0123588888877787  34665  68899977655554    4567778888999999999999999     


Q ss_pred             CCChhhHhhhhhhhccCCcEEEEEEeecCCCCc
Q 003952          645 DMTVSDARSLHRDEVENGLTFAGFAVFNCPIRE  677 (784)
Q Consensus       645 ~~~~~~~~~~~r~~~E~~l~flG~l~~~d~lr~  677 (784)
                                      .|..++|++.+.|++||
T Consensus       140 ----------------~d~~l~GvIalaD~iK~  156 (156)
T 1svj_A          140 ----------------EGSRVLGVIALKDIVKG  156 (156)
T ss_dssp             ----------------ETTEEEEEEEEEECCCC
T ss_pred             ----------------ECCEEEEEEEEecCCCC
Confidence                            46789999999999997


No 17 
>2kmv_A Copper-transporting ATPase 1; menkes, nucleotide binding protein, alternative splicing, ATP-binding, cell membrane, cytoplasm, disease mutation; NMR {Homo sapiens} PDB: 2kmx_A*
Probab=98.14  E-value=3.2e-05  Score=75.89  Aligned_cols=54  Identities=9%  Similarity=0.099  Sum_probs=45.6

Q ss_pred             EEEEeCchHHHHHhhccCchhHHHHHHHHhhccCeEEEEEEEeCCCCChhhHhhhhhhhccCCcEEEEEEeecCC
Q 003952          600 FAFVKGAPETIQDRLTDLPSSYIETYKKYTHQGSRVLALAFKSLPDMTVSDARSLHRDEVENGLTFAGFAVFNCP  674 (784)
Q Consensus       600 ~~~~KGapE~I~~~~~~~p~~~~~~~~~~~~~G~Rvlala~k~l~~~~~~~~~~~~r~~~E~~l~flG~l~~~d~  674 (784)
                      +.+..|++++|.+....+|+...+.+..+..+|..++.+|                     .|-.++|++.+.|+
T Consensus       132 ~~v~iGn~~~m~~~gi~i~~~~~~~~~~~~~~G~T~V~va---------------------idg~l~g~iavaD~  185 (185)
T 2kmv_A          132 YKVLIGNREWMIRNGLVINNDVNDFMTEHERKGRTAVLVA---------------------VDDELCGLIAIADT  185 (185)
T ss_dssp             EEEEEECHHHHHHHTCCCCHHHHHHHHHHHHTTCEEEEEE---------------------ETTEEEEEEEEECC
T ss_pred             eEEEECCHHHHHHcCCCCCHHHHHHHHHHHhCCCeEEEEE---------------------ECCEEEEEEEEEcC
Confidence            4678899999988777777777777888899999999999                     45689999999985


No 18 
>2arf_A Wilson disease ATPase; P-type ATPase,ATP7B, copper transport, nucleotide binding, ATP binding, hydrolase; NMR {Homo sapiens} PDB: 2koy_A
Probab=96.98  E-value=0.0036  Score=60.05  Aligned_cols=53  Identities=13%  Similarity=0.187  Sum_probs=43.6

Q ss_pred             EEEEeCchHHHHHhhccCchhHHHHHHHHhhccCeEEEEEEEeCCCCChhhHhhhhhhhccCCcEEEEEEeecC
Q 003952          600 FAFVKGAPETIQDRLTDLPSSYIETYKKYTHQGSRVLALAFKSLPDMTVSDARSLHRDEVENGLTFAGFAVFNC  673 (784)
Q Consensus       600 ~~~~KGapE~I~~~~~~~p~~~~~~~~~~~~~G~Rvlala~k~l~~~~~~~~~~~~r~~~E~~l~flG~l~~~d  673 (784)
                      +.+..|++++|.+....+|+...+.+..+..+|..++.+|                     .|-.++|++.+.|
T Consensus       113 ~~v~iGn~~~m~~~gi~~~~~~~~~~~~~~~~G~T~v~va---------------------~dg~~~g~i~l~D  165 (165)
T 2arf_A          113 FSVLIGNREWLRRNGLTISSDVSDAMTDHEMKGQTAILVA---------------------IDGVLCGMIAIAD  165 (165)
T ss_dssp             EEEEEECHHHHHHHHCSSCHHHHHHHHHHHTTTSEEEEEE---------------------ETTEEEEEEEECC
T ss_pred             eEEEEcCHHHHHhcCCCCCHHHHHHHHHHHhCCCeEEEEE---------------------ECCEEEEEEEEEC
Confidence            4677899999988766677777777778888999999999                     4668999999987


No 19 
>3n28_A Phosphoserine phosphatase; HAD family hydrolase, structural genomics, PSI, protein STRU initiative, nysgrc; 2.30A {Vibrio cholerae}
Probab=92.14  E-value=0.058  Score=57.49  Aligned_cols=42  Identities=14%  Similarity=0.280  Sum_probs=40.2

Q ss_pred             CCCcchHHHHHHHhhCCCcEEEEcCCCHHHHHHHHHHccccc
Q 003952          674 PIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVT  715 (784)
Q Consensus       674 ~lr~da~~~I~~L~~agi~v~MITGDn~~TA~~VA~~~gI~~  715 (784)
                      +++|++.+.++.|++.|+++.|+||++...+..+++++|+..
T Consensus       178 ~~~pg~~~~l~~L~~~g~~~~ivS~~~~~~~~~~~~~lgl~~  219 (335)
T 3n28_A          178 PLMPELPELVATLHAFGWKVAIASGGFTYFSDYLKEQLSLDY  219 (335)
T ss_dssp             CCCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCSE
T ss_pred             CcCcCHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHcCCCe
Confidence            789999999999999999999999999999999999999964


No 20 
>3mmz_A Putative HAD family hydrolase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.84A {Streptomyces avermitilis}
Probab=90.51  E-value=0.15  Score=48.83  Aligned_cols=33  Identities=15%  Similarity=0.231  Sum_probs=32.0

Q ss_pred             HHHHHhhCCCcEEEEcCCCHHHHHHHHHHcccc
Q 003952          682 ILSELKNSSQDLAMITGDQALTACYVASQVHIV  714 (784)
Q Consensus       682 ~I~~L~~agi~v~MITGDn~~TA~~VA~~~gI~  714 (784)
                      +|+.|++.|+++.++||++...+..+++++||.
T Consensus        47 ~l~~L~~~g~~~~i~T~~~~~~~~~~~~~lgi~   79 (176)
T 3mmz_A           47 GIAALRKSGLTMLILSTEQNPVVAARARKLKIP   79 (176)
T ss_dssp             HHHHHHHTTCEEEEEESSCCHHHHHHHHHHTCC
T ss_pred             HHHHHHHCCCeEEEEECcChHHHHHHHHHcCCe
Confidence            999999999999999999999999999999985


No 21 
>2hsz_A Novel predicted phosphatase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: UNL; 1.90A {Haemophilus somnus 129PT} SCOP: c.108.1.6
Probab=90.34  E-value=0.52  Score=47.13  Aligned_cols=49  Identities=16%  Similarity=0.097  Sum_probs=42.3

Q ss_pred             CCCCcchHHHHHHHhhCCCcEEEEcCCCHHHHHHHHHHcccccCCcEEE
Q 003952          673 CPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLIL  721 (784)
Q Consensus       673 d~lr~da~~~I~~L~~agi~v~MITGDn~~TA~~VA~~~gI~~~~~~il  721 (784)
                      .++.|++.++++.|++.|+++.++|+.....+..+.+++|+......+.
T Consensus       113 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~gl~~~f~~~~  161 (243)
T 2hsz_A          113 SRLYPNVKETLEALKAQGYILAVVTNKPTKHVQPILTAFGIDHLFSEML  161 (243)
T ss_dssp             CEECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGCSEEE
T ss_pred             CccCCCHHHHHHHHHHCCCEEEEEECCcHHHHHHHHHHcCchheEEEEE
Confidence            3567999999999999999999999999999999999999875444444


No 22 
>1l6r_A Hypothetical protein TA0175; structural genomics, putative hydrolas midwest center for structural genomics, MCSG, PSI; 1.40A {Thermoplasma acidophilum} SCOP: c.108.1.10 PDB: 1kyt_A
Probab=90.33  E-value=0.23  Score=49.69  Aligned_cols=42  Identities=7%  Similarity=0.103  Sum_probs=39.1

Q ss_pred             CCCCcchHHHHHHHhhCCCcEEEEcCCCHHHHHHHHHHcccc
Q 003952          673 CPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIV  714 (784)
Q Consensus       673 d~lr~da~~~I~~L~~agi~v~MITGDn~~TA~~VA~~~gI~  714 (784)
                      ..+.+++.++|++|++.|++++++||++...+..+++++|+.
T Consensus        21 ~~i~~~~~~~l~~l~~~g~~~~i~TGr~~~~~~~~~~~l~~~   62 (227)
T 1l6r_A           21 RLISTKAIESIRSAEKKGLTVSLLSGNVIPVVYALKIFLGIN   62 (227)
T ss_dssp             SCBCHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCC
T ss_pred             CcCCHHHHHHHHHHHHCCCEEEEECCCCcHHHHHHHHHhCCC
Confidence            467889999999999999999999999999999999999974


No 23 
>3kd3_A Phosphoserine phosphohydrolase-like protein; csgid, niaid, S genomics, national institute of allergy and infectious DISE (niaid); 1.70A {Francisella tularensis subsp}
Probab=89.17  E-value=0.82  Score=43.96  Aligned_cols=40  Identities=15%  Similarity=0.275  Sum_probs=38.3

Q ss_pred             CCcchHHHHHHHhhCCCcEEEEcCCCHHHHHHHHHHcccc
Q 003952          675 IREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIV  714 (784)
Q Consensus       675 lr~da~~~I~~L~~agi~v~MITGDn~~TA~~VA~~~gI~  714 (784)
                      +.|++.+.++.|++.|+++.++||.....+..+.+.+|+.
T Consensus        83 ~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~~~~~~~~  122 (219)
T 3kd3_A           83 LTDGIKELVQDLKNKGFEIWIFSGGLSESIQPFADYLNIP  122 (219)
T ss_dssp             BCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCC
T ss_pred             CChhHHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHcCCC
Confidence            7899999999999999999999999999999999999985


No 24 
>4gxt_A A conserved functionally unknown protein; structural genomics, PSI-biology; 1.82A {Anaerococcus prevotii}
Probab=88.21  E-value=0.2  Score=54.62  Aligned_cols=42  Identities=7%  Similarity=0.050  Sum_probs=39.3

Q ss_pred             CCCCcchHHHHHHHhhCCCcEEEEcCCCHHHHHHHHHHcccc
Q 003952          673 CPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIV  714 (784)
Q Consensus       673 d~lr~da~~~I~~L~~agi~v~MITGDn~~TA~~VA~~~gI~  714 (784)
                      -.++|++++.|+.||+.|++|+||||.....+..+|+++|+.
T Consensus       220 ir~~p~~~eLi~~L~~~G~~v~IVSgg~~~~v~~ia~~lg~~  261 (385)
T 4gxt_A          220 IRTLDEMVDLYRSLEENGIDCYIVSASFIDIVRAFATDTNNN  261 (385)
T ss_dssp             CEECHHHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHCTTSS
T ss_pred             ceeCHHHHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHhCcc
Confidence            347899999999999999999999999999999999999874


No 25 
>1k1e_A Deoxy-D-mannose-octulosonate 8-phosphate phosphat; structural genomics, KDO 8-P phosphatase, structure function project, S2F; HET: MES; 1.67A {Haemophilus influenzae RD} SCOP: c.108.1.5 PDB: 1j8d_A*
Probab=87.87  E-value=0.37  Score=46.12  Aligned_cols=39  Identities=10%  Similarity=0.099  Sum_probs=36.3

Q ss_pred             CcchHHHHHHHhhCCCcEEEEcCCCHHHHHHHHHHcccc
Q 003952          676 REDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIV  714 (784)
Q Consensus       676 r~da~~~I~~L~~agi~v~MITGDn~~TA~~VA~~~gI~  714 (784)
                      .+++.++|+.|++.|++++++||++...+..+++++|+.
T Consensus        37 ~~~~~~~l~~L~~~G~~~~i~Tg~~~~~~~~~~~~lgl~   75 (180)
T 1k1e_A           37 HVRDGLGIKMLMDADIQVAVLSGRDSPILRRRIADLGIK   75 (180)
T ss_dssp             EHHHHHHHHHHHHTTCEEEEEESCCCHHHHHHHHHHTCC
T ss_pred             ccchHHHHHHHHHCCCeEEEEeCCCcHHHHHHHHHcCCc
Confidence            456789999999999999999999999999999999985


No 26 
>2nyv_A Pgpase, PGP, phosphoglycolate phosphatase; structural genomics, PSI-2, protein structure initiative; 2.10A {Aquifex aeolicus} PDB: 2yy6_A
Probab=87.20  E-value=1.1  Score=44.09  Aligned_cols=49  Identities=14%  Similarity=0.087  Sum_probs=42.1

Q ss_pred             CCCCcchHHHHHHHhhCCCcEEEEcCCCHHHHHHHHHHcccccCCcEEE
Q 003952          673 CPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLIL  721 (784)
Q Consensus       673 d~lr~da~~~I~~L~~agi~v~MITGDn~~TA~~VA~~~gI~~~~~~il  721 (784)
                      .++.|++.++++.|++.|+++.++|+.....+..+.+.+|+......+.
T Consensus        82 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~~~f~~i~  130 (222)
T 2nyv_A           82 TKPYPEIPYTLEALKSKGFKLAVVSNKLEELSKKILDILNLSGYFDLIV  130 (222)
T ss_dssp             CEECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGCSEEE
T ss_pred             CccCCCHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCHHHheEEE
Confidence            3568999999999999999999999999999999999999875444444


No 27 
>2pib_A Phosphorylated carbohydrates phosphatase TM_1254; 3D-structure, structural genomics, NPPSFA; HET: MSE GOL; 1.73A {Thermotoga maritima MSB8} PDB: 3kbb_A*
Probab=87.15  E-value=0.79  Score=43.89  Aligned_cols=49  Identities=12%  Similarity=0.030  Sum_probs=42.7

Q ss_pred             CCCCcchHHHHHHHhhCCCcEEEEcCCCHHHHHHHHHHcccccCCcEEE
Q 003952          673 CPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLIL  721 (784)
Q Consensus       673 d~lr~da~~~I~~L~~agi~v~MITGDn~~TA~~VA~~~gI~~~~~~il  721 (784)
                      .++.|++.+.++.|++.|+++.++|+.....+..+.+..|+......+.
T Consensus        83 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~~~~f~~~~  131 (216)
T 2pib_A           83 LKENPGVREALEFVKSKRIKLALATSTPQREALERLRRLDLEKYFDVMV  131 (216)
T ss_dssp             CCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGCSEEE
T ss_pred             CCcCcCHHHHHHHHHHCCCCEEEEeCCcHHhHHHHHHhcChHHhcCEEe
Confidence            3568999999999999999999999999999999999999975544444


No 28 
>3p96_A Phosphoserine phosphatase SERB; ssgcid, structural genomics, structural genomics center for infectious disease, hydrolas; 2.05A {Mycobacterium avium}
Probab=86.99  E-value=0.23  Score=54.62  Aligned_cols=41  Identities=10%  Similarity=0.105  Sum_probs=39.8

Q ss_pred             CCCcchHHHHHHHhhCCCcEEEEcCCCHHHHHHHHHHcccc
Q 003952          674 PIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIV  714 (784)
Q Consensus       674 ~lr~da~~~I~~L~~agi~v~MITGDn~~TA~~VA~~~gI~  714 (784)
                      ++.|++.+.++.|++.|+++.++||.....+..+++++|+.
T Consensus       256 ~~~pg~~e~l~~Lk~~G~~~~ivS~~~~~~~~~~~~~lgl~  296 (415)
T 3p96_A          256 ELMPGARTTLRTLRRLGYACGVVSGGFRRIIEPLAEELMLD  296 (415)
T ss_dssp             CBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCS
T ss_pred             ccCccHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHcCcc
Confidence            78999999999999999999999999999999999999995


No 29 
>4ex6_A ALNB; modified rossman fold, phosphatase, magnesium binding, hydro; 1.25A {Streptomyces SP} PDB: 4ex7_A
Probab=86.83  E-value=0.65  Score=45.72  Aligned_cols=48  Identities=21%  Similarity=0.131  Sum_probs=42.4

Q ss_pred             CCCcchHHHHHHHhhCCCcEEEEcCCCHHHHHHHHHHcccccCCcEEE
Q 003952          674 PIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLIL  721 (784)
Q Consensus       674 ~lr~da~~~I~~L~~agi~v~MITGDn~~TA~~VA~~~gI~~~~~~il  721 (784)
                      ++.|++.+.++.|++.|+++.++|+.....+..+.+..|+......+.
T Consensus       104 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~~  151 (237)
T 4ex6_A          104 LLYPGVLEGLDRLSAAGFRLAMATSKVEKAARAIAELTGLDTRLTVIA  151 (237)
T ss_dssp             GBCTTHHHHHHHHHHTTEEEEEECSSCHHHHHHHHHHHTGGGTCSEEE
T ss_pred             ccCCCHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCchhheeeEE
Confidence            468999999999999999999999999999999999999876554444


No 30 
>3pct_A Class C acid phosphatase; hydrolase, outer membrane; 1.85A {Pasteurella multocida}
Probab=86.80  E-value=0.49  Score=48.45  Aligned_cols=82  Identities=9%  Similarity=0.097  Sum_probs=57.1

Q ss_pred             cCCCCcchHHHHHHHhhCCCcEEEEcCCCH----HHHHHHHHHcccccCC--cEEEecCCCCCeeEEeCCCcccccccch
Q 003952          672 NCPIREDSAKILSELKNSSQDLAMITGDQA----LTACYVASQVHIVTKP--VLILCPVKNGKVYEWVSPDETEKIQYSE  745 (784)
Q Consensus       672 ~d~lr~da~~~I~~L~~agi~v~MITGDn~----~TA~~VA~~~gI~~~~--~~il~~~~~~~~~~~~~~~~~~~~~~~~  745 (784)
                      ..++.|++.+.++.|++.|+++.+|||=..    ..+..--+++||....  .+++....                +.+.
T Consensus        99 ~~~~~pg~~ell~~L~~~G~~i~ivTgR~~~~~r~~T~~~L~~lGi~~~~~~~Lilr~~~----------------~~K~  162 (260)
T 3pct_A           99 QSAAIPGAVEFSNYVNANGGTMFFVSNRRDDVEKAGTVDDMKRLGFTGVNDKTLLLKKDK----------------SNKS  162 (260)
T ss_dssp             CCEECTTHHHHHHHHHHTTCEEEEEEEEETTTSHHHHHHHHHHHTCCCCSTTTEEEESSC----------------SSSH
T ss_pred             CCCCCccHHHHHHHHHHCCCeEEEEeCCCccccHHHHHHHHHHcCcCccccceeEecCCC----------------CChH
Confidence            357789999999999999999999998654    4666777888997432  45553220                1133


Q ss_pred             hhhhccCC-Cee-EEEechhHHHHhc
Q 003952          746 KEVEGLTD-AHD-LCIGGDCFEMLQQ  769 (784)
Q Consensus       746 ~~~~~l~~-~~~-l~~tGd~l~~l~~  769 (784)
                      ....++.+ .+. +++.||.++.|..
T Consensus       163 ~~r~~L~~~gy~iv~~iGD~~~Dl~~  188 (260)
T 3pct_A          163 VRFKQVEDMGYDIVLFVGDNLNDFGD  188 (260)
T ss_dssp             HHHHHHHTTTCEEEEEEESSGGGGCG
T ss_pred             HHHHHHHhcCCCEEEEECCChHHcCc
Confidence            33333333 455 7799999999875


No 31 
>3fvv_A Uncharacterized protein; unknown function, structural genomics, PSI,MCSG, protein STR initiative, midwest center for structural genomics; 2.10A {Bordetella pertussis}
Probab=86.16  E-value=0.55  Score=46.24  Aligned_cols=41  Identities=7%  Similarity=0.154  Sum_probs=39.2

Q ss_pred             CCCcchHHHHHHHhhCCCcEEEEcCCCHHHHHHHHHHcccc
Q 003952          674 PIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIV  714 (784)
Q Consensus       674 ~lr~da~~~I~~L~~agi~v~MITGDn~~TA~~VA~~~gI~  714 (784)
                      ++.|++.+.++.|++.|+++.++||.....+..+++.+|+.
T Consensus        92 ~~~~g~~~~l~~l~~~g~~~~ivS~~~~~~~~~~~~~~g~~  132 (232)
T 3fvv_A           92 SLTVQAVDVVRGHLAAGDLCALVTATNSFVTAPIARAFGVQ  132 (232)
T ss_dssp             GCCHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCC
T ss_pred             hcCHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCC
Confidence            47999999999999999999999999999999999999985


No 32 
>1nnl_A L-3-phosphoserine phosphatase; PSP, HPSP, phospho-aspartyl, hydrolase; 1.53A {Homo sapiens} SCOP: c.108.1.4 PDB: 1l8l_A* 1l8o_A
Probab=85.93  E-value=0.5  Score=46.40  Aligned_cols=42  Identities=19%  Similarity=0.230  Sum_probs=39.8

Q ss_pred             CCCCcchHHHHHHHhhCCCcEEEEcCCCHHHHHHHHHHcccc
Q 003952          673 CPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIV  714 (784)
Q Consensus       673 d~lr~da~~~I~~L~~agi~v~MITGDn~~TA~~VA~~~gI~  714 (784)
                      .++.|++.++++.|++.|+++.++||.+...+..+.+++|+.
T Consensus        85 ~~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~~gl~  126 (225)
T 1nnl_A           85 PHLTPGIRELVSRLQERNVQVFLISGGFRSIVEHVASKLNIP  126 (225)
T ss_dssp             CCBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCC
T ss_pred             CCCCccHHHHHHHHHHCCCcEEEEeCChHHHHHHHHHHcCCC
Confidence            478999999999999999999999999999999999999986


No 33 
>3ocu_A Lipoprotein E; hydrolase, outer membrane; HET: NMN; 1.35A {Haemophilus influenzae} PDB: 3ocv_A* 3ocw_A* 3ocx_A* 3ocz_A* 3ocy_A* 3sf0_A* 2hlk_A 2hll_A 3et4_A 3et5_A
Probab=85.90  E-value=0.42  Score=49.01  Aligned_cols=82  Identities=6%  Similarity=0.023  Sum_probs=57.1

Q ss_pred             cCCCCcchHHHHHHHhhCCCcEEEEcCCCH----HHHHHHHHHcccccCC--cEEEecCCCCCeeEEeCCCcccccccch
Q 003952          672 NCPIREDSAKILSELKNSSQDLAMITGDQA----LTACYVASQVHIVTKP--VLILCPVKNGKVYEWVSPDETEKIQYSE  745 (784)
Q Consensus       672 ~d~lr~da~~~I~~L~~agi~v~MITGDn~----~TA~~VA~~~gI~~~~--~~il~~~~~~~~~~~~~~~~~~~~~~~~  745 (784)
                      +.++.|++.+.++.|++.|+++.+|||=..    ..+..--++.||....  .+++.+..                +.+.
T Consensus        99 ~~~~~pG~~ell~~L~~~G~ki~ivTgR~~~~~r~~T~~~L~~lGi~~~~~~~Lilr~~~----------------~~K~  162 (262)
T 3ocu_A           99 QSRAVPGAVEFNNYVNSHNGKVFYVTNRKDSTEKSGTIDDMKRLGFNGVEESAFYLKKDK----------------SAKA  162 (262)
T ss_dssp             CCEECTTHHHHHHHHHHTTEEEEEEEEEETTTTHHHHHHHHHHHTCSCCSGGGEEEESSC----------------SCCH
T ss_pred             CCCCCccHHHHHHHHHHCCCeEEEEeCCCccchHHHHHHHHHHcCcCcccccceeccCCC----------------CChH
Confidence            356789999999999999999999998644    4666667789997433  55553221                1133


Q ss_pred             hhhhccCCC-ee-EEEechhHHHHhc
Q 003952          746 KEVEGLTDA-HD-LCIGGDCFEMLQQ  769 (784)
Q Consensus       746 ~~~~~l~~~-~~-l~~tGd~l~~l~~  769 (784)
                      .....+.+. +. +++.||-+..|..
T Consensus       163 ~~r~~l~~~Gy~iv~~vGD~~~Dl~~  188 (262)
T 3ocu_A          163 ARFAEIEKQGYEIVLYVGDNLDDFGN  188 (262)
T ss_dssp             HHHHHHHHTTEEEEEEEESSGGGGCS
T ss_pred             HHHHHHHhcCCCEEEEECCChHHhcc
Confidence            333333333 55 7899999999975


No 34 
>4ap9_A Phosphoserine phosphatase; hydrolase, haloacid dehalogenase superfamily, NDSB; HET: 1PS; 1.78A {Thermococcus onnurineus} PDB: 4b6j_A
Probab=84.79  E-value=0.17  Score=48.39  Aligned_cols=85  Identities=6%  Similarity=-0.006  Sum_probs=54.9

Q ss_pred             CCCcchHHHHHHHhhCCCcEEEEcCCCHHHHHHHHHHcccccCCcEEEecCCCCCeeEEeCCCcccccccchhhhhccCC
Q 003952          674 PIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLILCPVKNGKVYEWVSPDETEKIQYSEKEVEGLTD  753 (784)
Q Consensus       674 ~lr~da~~~I~~L~~agi~v~MITGDn~~TA~~VA~~~gI~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  753 (784)
                      +++|++.+.++.|++.|+++.++||++...+..+ +.+|+... ...+...+  ..+....+..    ..+...++.+ .
T Consensus        79 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~-~~~~~~~~-~~~~~~~~--~~~~~~~~~~----~~k~~~l~~l-~  149 (201)
T 4ap9_A           79 NVSPEARELVETLREKGFKVVLISGSFEEVLEPF-KELGDEFM-ANRAIFED--GKFQGIRLRF----RDKGEFLKRF-R  149 (201)
T ss_dssp             CCCHHHHHHHHHHHHTTCEEEEEEEEETTTSGGG-TTTSSEEE-EEEEEEET--TEEEEEECCS----SCHHHHHGGG-T
T ss_pred             CCChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHH-HHcCchhh-eeeEEeeC--CceECCcCCc----cCHHHHHHhc-C
Confidence            7899999999999999999999999999998888 99998543 21111110  1111100000    0122334445 4


Q ss_pred             CeeEEEechhHHHH
Q 003952          754 AHDLCIGGDCFEML  767 (784)
Q Consensus       754 ~~~l~~tGd~l~~l  767 (784)
                      ...+++.||+.+.+
T Consensus       150 ~~~~i~iGD~~~Di  163 (201)
T 4ap9_A          150 DGFILAMGDGYADA  163 (201)
T ss_dssp             TSCEEEEECTTCCH
T ss_pred             cCcEEEEeCCHHHH
Confidence            45688889987765


No 35 
>3s6j_A Hydrolase, haloacid dehalogenase-like family; structural genomics, PSI-2; 2.20A {Pseudomonas syringae PV}
Probab=84.40  E-value=1  Score=43.95  Aligned_cols=48  Identities=13%  Similarity=0.108  Sum_probs=41.6

Q ss_pred             CCCcchHHHHHHHhhCCCcEEEEcCCCHHHHHHHHHHcccccCCcEEE
Q 003952          674 PIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLIL  721 (784)
Q Consensus       674 ~lr~da~~~I~~L~~agi~v~MITGDn~~TA~~VA~~~gI~~~~~~il  721 (784)
                      ++.+++.+.++.|++.|+++.++|+.....+..+.+..|+......+.
T Consensus        91 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~~  138 (233)
T 3s6j_A           91 IALPGAVELLETLDKENLKWCIATSGGIDTATINLKALKLDINKINIV  138 (233)
T ss_dssp             EECTTHHHHHHHHHHTTCCEEEECSSCHHHHHHHHHTTTCCTTSSCEE
T ss_pred             ccCCCHHHHHHHHHHCCCeEEEEeCCchhhHHHHHHhcchhhhhheee
Confidence            457999999999999999999999999999999999999875444443


No 36 
>3n07_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; structural genomics, phosphatase, PSI-2, protein structure initiative; HET: MSE; 1.76A {Vibrio cholerae}
Probab=84.39  E-value=0.45  Score=46.42  Aligned_cols=34  Identities=21%  Similarity=0.210  Sum_probs=32.1

Q ss_pred             HHHHHHhhCCCcEEEEcCCCHHHHHHHHHHcccc
Q 003952          681 KILSELKNSSQDLAMITGDQALTACYVASQVHIV  714 (784)
Q Consensus       681 ~~I~~L~~agi~v~MITGDn~~TA~~VA~~~gI~  714 (784)
                      ..|+.|+++|+++.++||++...+..+++++||.
T Consensus        59 ~~l~~L~~~G~~~~ivT~~~~~~~~~~l~~lgi~   92 (195)
T 3n07_A           59 YGVKALMNAGIEIAIITGRRSQIVENRMKALGIS   92 (195)
T ss_dssp             HHHHHHHHTTCEEEEECSSCCHHHHHHHHHTTCC
T ss_pred             HHHHHHHHCCCEEEEEECcCHHHHHHHHHHcCCc
Confidence            3499999999999999999999999999999986


No 37 
>3m9l_A Hydrolase, haloacid dehalogenase-like family; HAD family hydrolase, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Pseudomonas fluorescens} PDB: 2ybd_A* 3r09_A*
Probab=84.33  E-value=1.5  Score=42.03  Aligned_cols=44  Identities=11%  Similarity=0.104  Sum_probs=39.6

Q ss_pred             CCCcchHHHHHHHhhCCCcEEEEcCCCHHHHHHHHHHcccccCC
Q 003952          674 PIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKP  717 (784)
Q Consensus       674 ~lr~da~~~I~~L~~agi~v~MITGDn~~TA~~VA~~~gI~~~~  717 (784)
                      ++.|++.+.++.|++.|+++.++|+.....+..+.+.+|+....
T Consensus        70 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f  113 (205)
T 3m9l_A           70 RPAPGAVELVRELAGRGYRLGILTRNARELAHVTLEAIGLADCF  113 (205)
T ss_dssp             EECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGS
T ss_pred             CCCccHHHHHHHHHhcCCeEEEEeCCchHHHHHHHHHcCchhhc
Confidence            45789999999999999999999999999999999999986543


No 38 
>3e58_A Putative beta-phosphoglucomutase; structu genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.86A {Streptococcus thermophilus lmg 18311}
Probab=84.24  E-value=1  Score=42.97  Aligned_cols=48  Identities=15%  Similarity=0.164  Sum_probs=42.0

Q ss_pred             CCCcchHHHHHHHhhCCCcEEEEcCCCHHHHHHHHHHcccccCCcEEE
Q 003952          674 PIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLIL  721 (784)
Q Consensus       674 ~lr~da~~~I~~L~~agi~v~MITGDn~~TA~~VA~~~gI~~~~~~il  721 (784)
                      ++.|++.+.++.|++.|+++.++|+.....+..+.+..|+......+.
T Consensus        89 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~~  136 (214)
T 3e58_A           89 LIFPDVLKVLNEVKSQGLEIGLASSSVKADIFRALEENRLQGFFDIVL  136 (214)
T ss_dssp             HBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCSEEE
T ss_pred             CcCchHHHHHHHHHHCCCCEEEEeCCcHHHHHHHHHHcCcHhheeeEe
Confidence            468999999999999999999999999999999999999975444444


No 39 
>2wm8_A MDP-1, magnesium-dependent phosphatase 1; haloacid dehalogenase, protein phosphatase, hydrolase, magne metal-binding; 1.75A {Homo sapiens} PDB: 1u7o_A 1u7p_A
Probab=83.82  E-value=1  Score=43.13  Aligned_cols=43  Identities=9%  Similarity=0.038  Sum_probs=39.4

Q ss_pred             CCCcchHHHHHHHhhCCCcEEEEcCCC-HHHHHHHHHHcccccC
Q 003952          674 PIREDSAKILSELKNSSQDLAMITGDQ-ALTACYVASQVHIVTK  716 (784)
Q Consensus       674 ~lr~da~~~I~~L~~agi~v~MITGDn-~~TA~~VA~~~gI~~~  716 (784)
                      ++.|++.++|+.|++.|+++.++||-. ...+..+.+.+|+...
T Consensus        68 ~~~~g~~e~L~~L~~~G~~v~ivT~~~~~~~~~~~l~~~gl~~~  111 (187)
T 2wm8_A           68 RLYPEVPEVLKRLQSLGVPGAAASRTSEIEGANQLLELFDLFRY  111 (187)
T ss_dssp             CCCTTHHHHHHHHHHHTCCEEEEECCSCHHHHHHHHHHTTCTTT
T ss_pred             CcchhHHHHHHHHHHCCceEEEEeCCCChHHHHHHHHHcCcHhh
Confidence            678999999999999999999999998 7899999999998643


No 40 
>3mc1_A Predicted phosphatase, HAD family; PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.93A {Clostridium acetobutylicum} SCOP: c.108.1.0
Probab=83.36  E-value=0.78  Score=44.68  Aligned_cols=49  Identities=14%  Similarity=0.137  Sum_probs=42.6

Q ss_pred             CCCCcchHHHHHHHhhCCCcEEEEcCCCHHHHHHHHHHcccccCCcEEE
Q 003952          673 CPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLIL  721 (784)
Q Consensus       673 d~lr~da~~~I~~L~~agi~v~MITGDn~~TA~~VA~~~gI~~~~~~il  721 (784)
                      .++.|++.+.++.|++.|+++.++|+.....+..+.+..|+......+.
T Consensus        85 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f~~~~  133 (226)
T 3mc1_A           85 NKVYDGIEALLSSLKDYGFHLVVATSKPTVFSKQILEHFKLAFYFDAIV  133 (226)
T ss_dssp             CCBCTTHHHHHHHHHHHTCEEEEEEEEEHHHHHHHHHHTTCGGGCSEEE
T ss_pred             CccCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhCCHhheeeee
Confidence            3678999999999999999999999999999999999999875444444


No 41 
>2p9j_A Hypothetical protein AQ2171; secsg, riken, PSI, structural GENO protein structure initiative, southeast collaboratory for S genomics; 2.40A {Aquifex aeolicus}
Probab=83.21  E-value=0.95  Score=42.04  Aligned_cols=40  Identities=13%  Similarity=0.086  Sum_probs=36.9

Q ss_pred             CCcchHHHHHHHhhCCCcEEEEcCCCHHHHHHHHHHcccc
Q 003952          675 IREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIV  714 (784)
Q Consensus       675 lr~da~~~I~~L~~agi~v~MITGDn~~TA~~VA~~~gI~  714 (784)
                      +.+++.++|+.|++.|+++.++||.+...+..+.+++|+.
T Consensus        37 ~~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~   76 (162)
T 2p9j_A           37 FNVLDGIGIKLLQKMGITLAVISGRDSAPLITRLKELGVE   76 (162)
T ss_dssp             EEHHHHHHHHHHHTTTCEEEEEESCCCHHHHHHHHHTTCC
T ss_pred             ecccHHHHHHHHHHCCCEEEEEeCCCcHHHHHHHHHcCCH
Confidence            3577899999999999999999999999999999999985


No 42 
>2no4_A (S)-2-haloacid dehalogenase IVA; HAD superfamily, rossman fold, hydrol; 1.93A {Burkholderia cepacia} PDB: 2no5_A*
Probab=83.12  E-value=1.5  Score=43.21  Aligned_cols=48  Identities=15%  Similarity=0.074  Sum_probs=41.9

Q ss_pred             CCCcchHHHHHHHhhCCCcEEEEcCCCHHHHHHHHHHcccccCCcEEE
Q 003952          674 PIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLIL  721 (784)
Q Consensus       674 ~lr~da~~~I~~L~~agi~v~MITGDn~~TA~~VA~~~gI~~~~~~il  721 (784)
                      ++.|++.+.++.|++.|+++.++|+.....+..+.+.+|+......+.
T Consensus       105 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~~  152 (240)
T 2no4_A          105 SAYPDAAETLEKLKSAGYIVAILSNGNDEMLQAALKASKLDRVLDSCL  152 (240)
T ss_dssp             CBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCSEEE
T ss_pred             CCCCCHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHhcCcHHHcCEEE
Confidence            678999999999999999999999999999999999999875444444


No 43 
>3kzx_A HAD-superfamily hydrolase, subfamily IA, variant; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ehrlich chaffeensis; 1.90A {Ehrlichia chaffeensis}
Probab=82.99  E-value=1.6  Score=42.66  Aligned_cols=48  Identities=10%  Similarity=0.158  Sum_probs=42.0

Q ss_pred             CCCcchHHHHHHHhhCCCcEEEEcCCCHHHHHHHHHHcccccCCcEEE
Q 003952          674 PIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLIL  721 (784)
Q Consensus       674 ~lr~da~~~I~~L~~agi~v~MITGDn~~TA~~VA~~~gI~~~~~~il  721 (784)
                      ++.|++.+.++.|++.|+++.++|+.....+..+.+..|+......+.
T Consensus       103 ~~~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~f~~i~  150 (231)
T 3kzx_A          103 MLNDGAIELLDTLKENNITMAIVSNKNGERLRSEIHHKNLTHYFDSII  150 (231)
T ss_dssp             EECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCGGGCSEEE
T ss_pred             eECcCHHHHHHHHHHCCCeEEEEECCCHHHHHHHHHHCCchhheeeEE
Confidence            468999999999999999999999999999999999999975444444


No 44 
>3sd7_A Putative phosphatase; structural genomics, haloacid dehalogenase-like hydrolase, H center for structural genomics of infectious diseases; HET: PGE; 1.70A {Clostridium difficile}
Probab=82.32  E-value=1.5  Score=43.12  Aligned_cols=49  Identities=20%  Similarity=0.097  Sum_probs=42.4

Q ss_pred             CCCCcchHHHHHHHhhCCCcEEEEcCCCHHHHHHHHHHcccccCCcEEE
Q 003952          673 CPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLIL  721 (784)
Q Consensus       673 d~lr~da~~~I~~L~~agi~v~MITGDn~~TA~~VA~~~gI~~~~~~il  721 (784)
                      .++.|++.+.++.|++.|+++.++|+.....+..+.+++|+......+.
T Consensus       109 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~~  157 (240)
T 3sd7_A          109 NKIYENMKEILEMLYKNGKILLVATSKPTVFAETILRYFDIDRYFKYIA  157 (240)
T ss_dssp             CEECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCGGGCSEEE
T ss_pred             cccCccHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHcCcHhhEEEEE
Confidence            3568999999999999999999999999999999999999975444444


No 45 
>3um9_A Haloacid dehalogenase, type II; haloacid dehalogenase-like hydrolase protein superfamily, defluorinase, hydrolase; 2.19A {Polaromonas SP}
Probab=82.14  E-value=1.8  Score=42.07  Aligned_cols=49  Identities=10%  Similarity=0.109  Sum_probs=42.4

Q ss_pred             CCCCcchHHHHHHHhhCCCcEEEEcCCCHHHHHHHHHHcccccCCcEEE
Q 003952          673 CPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLIL  721 (784)
Q Consensus       673 d~lr~da~~~I~~L~~agi~v~MITGDn~~TA~~VA~~~gI~~~~~~il  721 (784)
                      .++.|++.+.++.|++.|+++.++|+.....+..+.+.+|+......+.
T Consensus        95 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~~  143 (230)
T 3um9_A           95 LTPFADVPQALQQLRAAGLKTAILSNGSRHSIRQVVGNSGLTNSFDHLI  143 (230)
T ss_dssp             CCBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHTCGGGCSEEE
T ss_pred             CCCCCCHHHHHHHHHhCCCeEEEEeCCCHHHHHHHHHHCCChhhcceeE
Confidence            4678999999999999999999999999999999999999875444444


No 46 
>3mn1_A Probable YRBI family phosphatase; structural genomics, PSI, protein structure initiative, NYSG phosphatase; 1.80A {Pseudomonas syringae PV} PDB: 3nrj_A
Probab=82.04  E-value=0.95  Score=43.65  Aligned_cols=33  Identities=21%  Similarity=0.136  Sum_probs=32.1

Q ss_pred             HHHHHhhCCCcEEEEcCCCHHHHHHHHHHcccc
Q 003952          682 ILSELKNSSQDLAMITGDQALTACYVASQVHIV  714 (784)
Q Consensus       682 ~I~~L~~agi~v~MITGDn~~TA~~VA~~~gI~  714 (784)
                      +|+.|++.|+++.++||++..++..+++++||.
T Consensus        54 ~l~~L~~~g~~~~i~T~~~~~~~~~~~~~lgl~   86 (189)
T 3mn1_A           54 GIKMLIASGVTTAIISGRKTAIVERRAKSLGIE   86 (189)
T ss_dssp             HHHHHHHTTCEEEEECSSCCHHHHHHHHHHTCS
T ss_pred             HHHHHHHCCCEEEEEECcChHHHHHHHHHcCCH
Confidence            999999999999999999999999999999985


No 47 
>1zrn_A L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseudomonas SP} SCOP: c.108.1.1 PDB: 1zrm_A 1jud_A 1qh9_A
Probab=81.91  E-value=1.4  Score=43.05  Aligned_cols=48  Identities=19%  Similarity=0.147  Sum_probs=41.4

Q ss_pred             CCCcchHHHHHHHhhCCCcEEEEcCCCHHHHHHHHHHcccccCCcEEE
Q 003952          674 PIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLIL  721 (784)
Q Consensus       674 ~lr~da~~~I~~L~~agi~v~MITGDn~~TA~~VA~~~gI~~~~~~il  721 (784)
                      ++.|++.+.++.|++.|+++.++|+.....+..+.+.+|+......+.
T Consensus        95 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f~~~~  142 (232)
T 1zrn_A           95 APFSEVPDSLRELKRRGLKLAILSNGSPQSIDAVVSHAGLRDGFDHLL  142 (232)
T ss_dssp             EECTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCSEEE
T ss_pred             CCCccHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHhcChHhhhheEE
Confidence            578999999999999999999999999999999999999875443443


No 48 
>3nuq_A Protein SSM1, putative nucleotide phosphatase; suppresses the 6-AU sensitivity of transcription elongation II; 1.70A {Saccharomyces cerevisiae} PDB: 3onn_A 3opx_A*
Probab=81.22  E-value=1.8  Score=44.02  Aligned_cols=49  Identities=14%  Similarity=-0.017  Sum_probs=43.0

Q ss_pred             CCCCcchHHHHHHHhhCCC--cEEEEcCCCHHHHHHHHHHcccccCCcEEE
Q 003952          673 CPIREDSAKILSELKNSSQ--DLAMITGDQALTACYVASQVHIVTKPVLIL  721 (784)
Q Consensus       673 d~lr~da~~~I~~L~~agi--~v~MITGDn~~TA~~VA~~~gI~~~~~~il  721 (784)
                      -++.|++.++++.|++.|+  ++.++|+.....+..+.+.+|+......+.
T Consensus       141 ~~~~p~~~~~L~~L~~~g~~~~l~i~Tn~~~~~~~~~l~~~gl~~~fd~v~  191 (282)
T 3nuq_A          141 LKPDIPLRNMLLRLRQSGKIDKLWLFTNAYKNHAIRCLRLLGIADLFDGLT  191 (282)
T ss_dssp             CCCCHHHHHHHHHHHHSSSCSEEEEECSSCHHHHHHHHHHHTCTTSCSEEE
T ss_pred             cCcChhHHHHHHHHHhCCCCceEEEEECCChHHHHHHHHhCCcccccceEE
Confidence            4678999999999999999  999999999999999999999976555554


No 49 
>1te2_A Putative phosphatase; structural genomics, phosphates, PSI, protein S initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Escherichia coli} SCOP: c.108.1.6
Probab=81.18  E-value=2.1  Score=41.21  Aligned_cols=48  Identities=6%  Similarity=-0.006  Sum_probs=40.7

Q ss_pred             CCCcchHHHHHHHhhCCCcEEEEcCCCHHHHHHHHHHcccccCCcEEE
Q 003952          674 PIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLIL  721 (784)
Q Consensus       674 ~lr~da~~~I~~L~~agi~v~MITGDn~~TA~~VA~~~gI~~~~~~il  721 (784)
                      ++.+++.+.++.|++.|+++.++|+.....+..+.+..|+......+.
T Consensus        94 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~~~~~~~~~~  141 (226)
T 1te2_A           94 PLLPGVREAVALCKEQGLLVGLASASPLHMLEKVLTMFDLRDSFDALA  141 (226)
T ss_dssp             CBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCSEEE
T ss_pred             CcCccHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHhcCcHhhCcEEE
Confidence            557899999999999999999999999998899999999875433443


No 50 
>4eze_A Haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 2.27A {Salmonella enterica subsp}
Probab=80.20  E-value=1  Score=47.51  Aligned_cols=42  Identities=14%  Similarity=0.182  Sum_probs=39.9

Q ss_pred             CCCcchHHHHHHHhhCCCcEEEEcCCCHHHHHHHHHHccccc
Q 003952          674 PIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVT  715 (784)
Q Consensus       674 ~lr~da~~~I~~L~~agi~v~MITGDn~~TA~~VA~~~gI~~  715 (784)
                      ++.|++.++++.|++.|+++.++||.....+..+++++|+..
T Consensus       179 ~l~pg~~e~L~~Lk~~G~~v~IvSn~~~~~~~~~l~~lgl~~  220 (317)
T 4eze_A          179 TLSPGLLTILPVIKAKGFKTAIISGGLDIFTQRLKARYQLDY  220 (317)
T ss_dssp             CBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCSE
T ss_pred             EECcCHHHHHHHHHhCCCEEEEEeCccHHHHHHHHHHcCCCe
Confidence            489999999999999999999999999999999999999963


No 51 
>3umb_A Dehalogenase-like hydrolase; 2.20A {Ralstonia solanacearum}
Probab=79.24  E-value=2.2  Score=41.54  Aligned_cols=49  Identities=8%  Similarity=0.085  Sum_probs=42.5

Q ss_pred             CCCCcchHHHHHHHhhCCCcEEEEcCCCHHHHHHHHHHcccccCCcEEE
Q 003952          673 CPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLIL  721 (784)
Q Consensus       673 d~lr~da~~~I~~L~~agi~v~MITGDn~~TA~~VA~~~gI~~~~~~il  721 (784)
                      .++.|++.++++.|++.|+++.++|+.....+..+.+.+|+......+.
T Consensus        98 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f~~~~  146 (233)
T 3umb_A           98 LSAFPENVPVLRQLREMGLPLGILSNGNPQMLEIAVKSAGMSGLFDHVL  146 (233)
T ss_dssp             CEECTTHHHHHHHHHTTTCCEEEEESSCHHHHHHHHHTTTCTTTCSEEE
T ss_pred             CCCCCCHHHHHHHHHhCCCcEEEEeCCCHHHHHHHHHHCCcHhhcCEEE
Confidence            4568999999999999999999999999999999999999875544444


No 52 
>3kbb_A Phosphorylated carbohydrates phosphatase TM_1254; hydrolase, arbohydrate metabolism, COBA magnesium, manganese, metal-binding, nickel; HET: MSE GOL; 1.74A {Thermotoga maritima MSB8}
Probab=79.06  E-value=2.6  Score=40.66  Aligned_cols=48  Identities=13%  Similarity=0.041  Sum_probs=42.4

Q ss_pred             CCCcchHHHHHHHhhCCCcEEEEcCCCHHHHHHHHHHcccccCCcEEE
Q 003952          674 PIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLIL  721 (784)
Q Consensus       674 ~lr~da~~~I~~L~~agi~v~MITGDn~~TA~~VA~~~gI~~~~~~il  721 (784)
                      ++.|++.++++.|++.|+++.++|+-+...+..+-+.+|+.+....+.
T Consensus        84 ~~~pg~~~~l~~L~~~g~~~~i~tn~~~~~~~~~l~~~~l~~~fd~~~  131 (216)
T 3kbb_A           84 KENPGVREALEFVKSKRIKLALATSTPQREALERLRRLDLEKYFDVMV  131 (216)
T ss_dssp             CBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGCSEEE
T ss_pred             ccCccHHHHHHHHHHcCCCcccccCCcHHHHHHHHHhcCCCccccccc
Confidence            457899999999999999999999999999999999999986544444


No 53 
>3iru_A Phoshonoacetaldehyde hydrolase like protein; phosphonoacetaldehyde hydrolase like P structural genomics, PSI-2, protein structure initiative; 2.30A {Oleispira antarctica} SCOP: c.108.1.0
Probab=78.88  E-value=3.9  Score=40.86  Aligned_cols=48  Identities=8%  Similarity=-0.031  Sum_probs=41.5

Q ss_pred             CCCcchHHHHHHHhhCCCcEEEEcCCCHHHHHHHHHHcccccC-CcEEE
Q 003952          674 PIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTK-PVLIL  721 (784)
Q Consensus       674 ~lr~da~~~I~~L~~agi~v~MITGDn~~TA~~VA~~~gI~~~-~~~il  721 (784)
                      ++.+++.+.++.|++.|+++.++|+.....+..+.+.+|+... ...+.
T Consensus       111 ~~~~~~~~~l~~l~~~g~~~~i~tn~~~~~~~~~l~~~~~~~~~~~~~~  159 (277)
T 3iru_A          111 QLIPGWKEVFDKLIAQGIKVGGNTGYGPGMMAPALIAAKEQGYTPASTV  159 (277)
T ss_dssp             CBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHHHTTCCCSEEE
T ss_pred             ccCcCHHHHHHHHHHcCCeEEEEeCCchHHHHHHHHhcCcccCCCceEe
Confidence            5689999999999999999999999999999999999998754 34443


No 54 
>3ij5_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; IDP022 hydrolase, lipopolysaccharide biosynthesis, magnesium, STRU genomics; 1.95A {Yersinia pestis}
Probab=78.87  E-value=1.4  Score=43.54  Aligned_cols=33  Identities=30%  Similarity=0.221  Sum_probs=32.1

Q ss_pred             HHHHHhhCCCcEEEEcCCCHHHHHHHHHHcccc
Q 003952          682 ILSELKNSSQDLAMITGDQALTACYVASQVHIV  714 (784)
Q Consensus       682 ~I~~L~~agi~v~MITGDn~~TA~~VA~~~gI~  714 (784)
                      +|+.|+++|+++.++||++...+..+++++||.
T Consensus        84 ~L~~L~~~G~~l~I~T~~~~~~~~~~l~~lgi~  116 (211)
T 3ij5_A           84 GIRCLITSDIDVAIITGRRAKLLEDRANTLGIT  116 (211)
T ss_dssp             HHHHHHHTTCEEEEECSSCCHHHHHHHHHHTCC
T ss_pred             HHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCc
Confidence            999999999999999999999999999999995


No 55 
>3e8m_A Acylneuraminate cytidylyltransferase; 2-keto-3-deoxynononic acid 9-phosphate phosphohydrolase, nucleotidyltransferase; HET: PEG PG4 EDO PGE; 1.10A {Bacteroides thetaiotaomicron} PDB: 3e84_A 3e81_A*
Probab=78.47  E-value=1.6  Score=40.43  Aligned_cols=33  Identities=12%  Similarity=0.115  Sum_probs=31.9

Q ss_pred             HHHHHhhCCCcEEEEcCCCHHHHHHHHHHcccc
Q 003952          682 ILSELKNSSQDLAMITGDQALTACYVASQVHIV  714 (784)
Q Consensus       682 ~I~~L~~agi~v~MITGDn~~TA~~VA~~~gI~  714 (784)
                      +++.|++.|+++.++||++...+..+++++|+.
T Consensus        39 ~l~~l~~~g~~~~i~T~~~~~~~~~~~~~~gl~   71 (164)
T 3e8m_A           39 GIFWAHNKGIPVGILTGEKTEIVRRRAEKLKVD   71 (164)
T ss_dssp             HHHHHHHTTCCEEEECSSCCHHHHHHHHHTTCS
T ss_pred             HHHHHHHCCCEEEEEeCCChHHHHHHHHHcCCC
Confidence            899999999999999999999999999999985


No 56 
>2hcf_A Hydrolase, haloacid dehalogenase-like family; NP_662590.1, ST genomics, PSI-2, protein structure initiative; 1.80A {Chlorobaculum tepidum} SCOP: c.108.1.6
Probab=77.47  E-value=3.2  Score=40.26  Aligned_cols=43  Identities=16%  Similarity=0.137  Sum_probs=38.8

Q ss_pred             CCCcchHHHHHHHhhC-CCcEEEEcCCCHHHHHHHHHHcccccC
Q 003952          674 PIREDSAKILSELKNS-SQDLAMITGDQALTACYVASQVHIVTK  716 (784)
Q Consensus       674 ~lr~da~~~I~~L~~a-gi~v~MITGDn~~TA~~VA~~~gI~~~  716 (784)
                      ++.|++.+.++.|++. |+++.++|+.....+..+.+..|+...
T Consensus        93 ~~~~~~~~~l~~l~~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~  136 (234)
T 2hcf_A           93 TLLEGVRELLDALSSRSDVLLGLLTGNFEASGRHKLKLPGIDHY  136 (234)
T ss_dssp             EECTTHHHHHHHHHTCTTEEEEEECSSCHHHHHHHHHTTTCSTT
T ss_pred             CcCCCHHHHHHHHHhCCCceEEEEcCCcHHHHHHHHHHCCchhh
Confidence            3579999999999999 999999999999999999999998754


No 57 
>2fi1_A Hydrolase, haloacid dehalogenase-like family; structural genomics, haloacid dehalogenase-like F PSI, protein structure initiative; 1.40A {Streptococcus pneumoniae} SCOP: c.108.1.3
Probab=77.33  E-value=5.1  Score=37.46  Aligned_cols=80  Identities=10%  Similarity=0.027  Sum_probs=51.9

Q ss_pred             CCcchHHHHHHHhhCCCcEEEEcCCCHHHHHHHHHHcccccCCcEEEecCCCCCeeEEeCCCcccccccchh----hhhc
Q 003952          675 IREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLILCPVKNGKVYEWVSPDETEKIQYSEK----EVEG  750 (784)
Q Consensus       675 lr~da~~~I~~L~~agi~v~MITGDn~~TA~~VA~~~gI~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~  750 (784)
                      +.|++.+.++.|++.|+++.++|+... .+..+.++.|+......+.....    +.        ...-++.    ..+.
T Consensus        83 ~~~~~~~~l~~l~~~g~~~~i~t~~~~-~~~~~l~~~~~~~~f~~~~~~~~----~~--------~~kp~~~~~~~~~~~  149 (190)
T 2fi1_A           83 LFEGVSDLLEDISNQGGRHFLVSHRND-QVLEILEKTSIAAYFTEVVTSSS----GF--------KRKPNPESMLYLREK  149 (190)
T ss_dssp             BCTTHHHHHHHHHHTTCEEEEECSSCT-HHHHHHHHTTCGGGEEEEECGGG----CC--------CCTTSCHHHHHHHHH
T ss_pred             cCcCHHHHHHHHHHCCCcEEEEECCcH-HHHHHHHHcCCHhheeeeeeccc----cC--------CCCCCHHHHHHHHHH
Confidence            589999999999999999999998765 56777888887643333332110    00        0000111    1223


Q ss_pred             cCCCeeEEEechhHHHHh
Q 003952          751 LTDAHDLCIGGDCFEMLQ  768 (784)
Q Consensus       751 l~~~~~l~~tGd~l~~l~  768 (784)
                      +.-+ ++++.||+.+.+.
T Consensus       150 ~~~~-~~~~iGD~~~Di~  166 (190)
T 2fi1_A          150 YQIS-SGLVIGDRPIDIE  166 (190)
T ss_dssp             TTCS-SEEEEESSHHHHH
T ss_pred             cCCC-eEEEEcCCHHHHH
Confidence            3334 7899999988874


No 58 
>2obb_A Hypothetical protein; structural genomics, PSI-2, PR structure initiative, midwest center for structural genomic unknown function; 2.20A {Bacteroides thetaiotaomicron} SCOP: c.108.1.25
Probab=76.95  E-value=2.5  Score=38.97  Aligned_cols=40  Identities=10%  Similarity=-0.060  Sum_probs=34.0

Q ss_pred             CCcchHHHHHHHhhCCCcEEEEcCCC---HHHHHHHHHHcccc
Q 003952          675 IREDSAKILSELKNSSQDLAMITGDQ---ALTACYVASQVHIV  714 (784)
Q Consensus       675 lr~da~~~I~~L~~agi~v~MITGDn---~~TA~~VA~~~gI~  714 (784)
                      +-|++.++|++|++.|+++++.||-+   ...+....++.|+.
T Consensus        25 ~~~~~~~al~~l~~~G~~iii~TgR~~~~~~~~~~~l~~~gi~   67 (142)
T 2obb_A           25 EIPFAVETLKLLQQEKHRLILWSVREGELLDEAIEWCRARGLE   67 (142)
T ss_dssp             BCTTHHHHHHHHHHTTCEEEECCSCCHHHHHHHHHHHHTTTCC
T ss_pred             cCHHHHHHHHHHHHCCCEEEEEeCCCcccHHHHHHHHHHcCCC
Confidence            34689999999999999999999976   56677778888874


No 59 
>3ib6_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.20A {Listeria monocytogenes}
Probab=76.87  E-value=3.1  Score=39.75  Aligned_cols=49  Identities=14%  Similarity=0.174  Sum_probs=41.8

Q ss_pred             CCCCcchHHHHHHHhhCCCcEEEEcCCCH---HHHHHHHHHcccccCCcEEE
Q 003952          673 CPIREDSAKILSELKNSSQDLAMITGDQA---LTACYVASQVHIVTKPVLIL  721 (784)
Q Consensus       673 d~lr~da~~~I~~L~~agi~v~MITGDn~---~TA~~VA~~~gI~~~~~~il  721 (784)
                      .++.|++.++++.|++.|+++.++|+-..   ..+..+.+..|+......+.
T Consensus        33 ~~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~~~~l~~~gl~~~fd~i~   84 (189)
T 3ib6_A           33 VVLRKNAKETLEKVKQLGFKQAILSNTATSDTEVIKRVLTNFGIIDYFDFIY   84 (189)
T ss_dssp             CCBCTTHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHTTCGGGEEEEE
T ss_pred             ceeCcCHHHHHHHHHHCCCEEEEEECCCccchHHHHHHHHhcCchhheEEEE
Confidence            47899999999999999999999998765   88899999999975444444


No 60 
>3d6j_A Putative haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides fragilis nctc 9343}
Probab=76.08  E-value=4.6  Score=38.61  Aligned_cols=47  Identities=13%  Similarity=0.082  Sum_probs=39.7

Q ss_pred             CCcchHHHHHHHhhCCCcEEEEcCCCHHHHHHHHHHcccccCCcEEE
Q 003952          675 IREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLIL  721 (784)
Q Consensus       675 lr~da~~~I~~L~~agi~v~MITGDn~~TA~~VA~~~gI~~~~~~il  721 (784)
                      +.+++.+.++.|++.|+++.++|+.....+..+.+..|+......+.
T Consensus        90 ~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~~~~~~~~~~~~~~~  136 (225)
T 3d6j_A           90 LFPDTLPTLTHLKKQGIRIGIISTKYRFRILSFLRNHMPDDWFDIII  136 (225)
T ss_dssp             ECTTHHHHHHHHHHHTCEEEEECSSCHHHHHHHHHTSSCTTCCSEEE
T ss_pred             cCcCHHHHHHHHHHCCCeEEEEECCCHHHHHHHHHHcCchhheeeee
Confidence            36899999999999999999999999999999999999865433333


No 61 
>2go7_A Hydrolase, haloacid dehalogenase-like family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.10A {Streptococcus pneumoniae} SCOP: c.108.1.6
Probab=75.68  E-value=3.8  Score=38.48  Aligned_cols=42  Identities=7%  Similarity=0.028  Sum_probs=36.9

Q ss_pred             CCCcchHHHHHHHhhCCCcEEEEcCCCHHHHHHHHHHcccccC
Q 003952          674 PIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTK  716 (784)
Q Consensus       674 ~lr~da~~~I~~L~~agi~v~MITGDn~~TA~~VA~~~gI~~~  716 (784)
                      .+.|++.+.++.|++.|+++.++|+++..... +.+..|+...
T Consensus        85 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~-~~~~~~~~~~  126 (207)
T 2go7_A           85 VLMPGAREVLAWADESGIQQFIYTHKGNNAFT-ILKDLGVESY  126 (207)
T ss_dssp             EECTTHHHHHHHHHHTTCEEEEECSSCTHHHH-HHHHHTCGGG
T ss_pred             eeCcCHHHHHHHHHHCCCeEEEEeCCchHHHH-HHHHcCchhh
Confidence            45899999999999999999999999988888 8888887643


No 62 
>2hdo_A Phosphoglycolate phosphatase; NP_784602.1, structur genomics, PSI-2, protein structure initiative, joint center structural genomics; HET: MSE; 1.50A {Lactobacillus plantarum} SCOP: c.108.1.6
Probab=75.23  E-value=3.5  Score=39.41  Aligned_cols=47  Identities=6%  Similarity=0.102  Sum_probs=39.9

Q ss_pred             CCCcchHHHHHHHhhCCCcEEEEcCCCHHHHHHHHHHcccccCCcEEE
Q 003952          674 PIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLIL  721 (784)
Q Consensus       674 ~lr~da~~~I~~L~~agi~v~MITGDn~~TA~~VA~~~gI~~~~~~il  721 (784)
                      ++.|++.+.++.|++. +++.++|+.....+..+.+.+|+......+.
T Consensus        83 ~~~~~~~~~l~~l~~~-~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~~  129 (209)
T 2hdo_A           83 ELYPGITSLFEQLPSE-LRLGIVTSQRRNELESGMRSYPFMMRMAVTI  129 (209)
T ss_dssp             EECTTHHHHHHHSCTT-SEEEEECSSCHHHHHHHHTTSGGGGGEEEEE
T ss_pred             CcCCCHHHHHHHHHhc-CcEEEEeCCCHHHHHHHHHHcChHhhccEEE
Confidence            4689999999999999 9999999999999999999999864433333


No 63 
>2hi0_A Putative phosphoglycolate phosphatase; YP_619066.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.51A {Lactobacillus delbrueckii}
Probab=75.05  E-value=3.5  Score=40.73  Aligned_cols=46  Identities=9%  Similarity=0.078  Sum_probs=39.2

Q ss_pred             CCcchHHHHHHHhhCCCcEEEEcCCCHHHHHHHHHHcccccCCcEEE
Q 003952          675 IREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLIL  721 (784)
Q Consensus       675 lr~da~~~I~~L~~agi~v~MITGDn~~TA~~VA~~~gI~~~~~~il  721 (784)
                      +.|++.++++.|++.|+++.++|+.....+..+-+++|+. ....+.
T Consensus       111 ~~~g~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~-~f~~~~  156 (240)
T 2hi0_A          111 PFPGILDLMKNLRQKGVKLAVVSNKPNEAVQVLVEELFPG-SFDFAL  156 (240)
T ss_dssp             ECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHSTT-TCSEEE
T ss_pred             cCCCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCc-ceeEEE
Confidence            5689999999999999999999999988888889999975 434444


No 64 
>3n1u_A Hydrolase, HAD superfamily, subfamily III A; structural genomics, PSI-2; 1.80A {Legionella pneumophila} SCOP: c.108.1.0
Probab=74.74  E-value=1.3  Score=42.84  Aligned_cols=33  Identities=24%  Similarity=0.122  Sum_probs=31.6

Q ss_pred             HHHHHhhCCCcEEEEcCCCHHHHHHHHHHcccc
Q 003952          682 ILSELKNSSQDLAMITGDQALTACYVASQVHIV  714 (784)
Q Consensus       682 ~I~~L~~agi~v~MITGDn~~TA~~VA~~~gI~  714 (784)
                      +|+.|++.|+++.++||++...+..+++++|+.
T Consensus        54 ~l~~L~~~g~~~~ivTn~~~~~~~~~l~~lgl~   86 (191)
T 3n1u_A           54 GLKLLMAAGIQVAIITTAQNAVVDHRMEQLGIT   86 (191)
T ss_dssp             HHHHHHHTTCEEEEECSCCSHHHHHHHHHHTCC
T ss_pred             HHHHHHHCCCeEEEEeCcChHHHHHHHHHcCCc
Confidence            499999999999999999999999999999986


No 65 
>3m1y_A Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, phophoserine phosphatase, protein structure initiative, structural genomics; 2.40A {Helicobacter pylori} SCOP: c.108.1.0
Probab=74.46  E-value=1.8  Score=41.79  Aligned_cols=44  Identities=18%  Similarity=0.295  Sum_probs=40.6

Q ss_pred             CCCCcchHHHHHHHhhCCCcEEEEcCCCHHHHHHHHHHcccccC
Q 003952          673 CPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTK  716 (784)
Q Consensus       673 d~lr~da~~~I~~L~~agi~v~MITGDn~~TA~~VA~~~gI~~~  716 (784)
                      -++.|++.+.++.|++.|+++.++|+.....+..+.+.+|+...
T Consensus        74 ~~~~~~~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~gl~~~  117 (217)
T 3m1y_A           74 LPLFEGALELVSALKEKNYKVVCFSGGFDLATNHYRDLLHLDAA  117 (217)
T ss_dssp             CCBCBTHHHHHHHHHTTTEEEEEEEEEEHHHHHHHHHHHTCSEE
T ss_pred             CcCCCCHHHHHHHHHHCCCEEEEEcCCchhHHHHHHHHcCcchh
Confidence            46899999999999999999999999999999999999998643


No 66 
>2pr7_A Haloacid dehalogenase/epoxide hydrolase family; NP_599989.1, uncharacterized protein, structural genomics; 1.44A {Corynebacterium glutamicum atcc 13032}
Probab=73.71  E-value=1.9  Score=38.10  Aligned_cols=48  Identities=8%  Similarity=0.035  Sum_probs=40.6

Q ss_pred             CCCcchHHHHHHHhhCCCcEEEEcCCCHHHHHHHHHHcccccCCcEEE
Q 003952          674 PIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLIL  721 (784)
Q Consensus       674 ~lr~da~~~I~~L~~agi~v~MITGDn~~TA~~VA~~~gI~~~~~~il  721 (784)
                      ++.|++.++++.|++.|+++.++|+.....+..+.+++|+......+.
T Consensus        18 ~~~~~~~~~l~~L~~~G~~~~i~S~~~~~~~~~~l~~~~l~~~f~~i~   65 (137)
T 2pr7_A           18 EDQRRWRNLLAAAKKNGVGTVILSNDPGGLGAAPIRELETNGVVDKVL   65 (137)
T ss_dssp             HHHHHHHHHHHHHHHTTCEEEEEECSCCGGGGHHHHHHHHTTSSSEEE
T ss_pred             ccCccHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHCChHhhccEEE
Confidence            467889999999999999999999999988888889999865444443


No 67 
>2ah5_A COG0546: predicted phosphatases; MCSG, structural genomics, hydrola haloacid dehalogenase-like, PSI; 1.74A {Streptococcus pneumoniae} SCOP: c.108.1.6
Probab=72.84  E-value=4.5  Score=38.97  Aligned_cols=47  Identities=23%  Similarity=0.116  Sum_probs=40.0

Q ss_pred             CCCcchHHHHHHHhhCCCcEEEEcCCCHHHHHHHHHHcccccCCcEEE
Q 003952          674 PIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLIL  721 (784)
Q Consensus       674 ~lr~da~~~I~~L~~agi~v~MITGDn~~TA~~VA~~~gI~~~~~~il  721 (784)
                      ++.|++.+.++.|++ |+++.++|+.+...+..+-+++|+......+.
T Consensus        84 ~~~~g~~~~l~~L~~-~~~l~i~T~~~~~~~~~~l~~~gl~~~f~~i~  130 (210)
T 2ah5_A           84 QLFPQIIDLLEELSS-SYPLYITTTKDTSTAQDMAKNLEIHHFFDGIY  130 (210)
T ss_dssp             EECTTHHHHHHHHHT-TSCEEEEEEEEHHHHHHHHHHTTCGGGCSEEE
T ss_pred             CCCCCHHHHHHHHHc-CCeEEEEeCCCHHHHHHHHHhcCchhheeeee
Confidence            467999999999999 99999999998888888899999975544444


No 68 
>3dv9_A Beta-phosphoglucomutase; structural genomics, APC60149, PSI- protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.72A {Bacteroides vulgatus}
Probab=72.59  E-value=2.9  Score=41.04  Aligned_cols=44  Identities=9%  Similarity=0.074  Sum_probs=35.6

Q ss_pred             CCCCcchHHHHHHHhhCCCcEEEEcCCCHHHHHHHHHHcccccCC
Q 003952          673 CPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKP  717 (784)
Q Consensus       673 d~lr~da~~~I~~L~~agi~v~MITGDn~~TA~~VA~~~gI~~~~  717 (784)
                      .++.|++.+.++.|++.|+++.++|+.....+....+. |+....
T Consensus       107 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~-~l~~~f  150 (247)
T 3dv9_A          107 AERMPGALEVLTKIKSEGLTPMVVTGSGQTSLLDRLNH-NFPGIF  150 (247)
T ss_dssp             CCBCTTHHHHHHHHHHTTCEEEEECSCC---CHHHHHH-HSTTTC
T ss_pred             CCCCCCHHHHHHHHHHcCCcEEEEcCCchHHHHHHHHh-hHHHhc
Confidence            46789999999999999999999999988878877777 887544


No 69 
>3nas_A Beta-PGM, beta-phosphoglucomutase; PSI, structural genomics, protein structure initiative, NEW research center for structural genomics; 3.00A {Bacillus subtilis}
Probab=71.58  E-value=2.9  Score=40.69  Aligned_cols=46  Identities=15%  Similarity=0.269  Sum_probs=37.7

Q ss_pred             CCCcchHHHHHHHhhCCCcEEEEcCCCHHHHHHHHHHcccccCCcEEE
Q 003952          674 PIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLIL  721 (784)
Q Consensus       674 ~lr~da~~~I~~L~~agi~v~MITGDn~~TA~~VA~~~gI~~~~~~il  721 (784)
                      ++.|++.+.++.|++.|+++.++|+...  +..+.+..|+......+.
T Consensus        92 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~--~~~~l~~~gl~~~f~~i~  137 (233)
T 3nas_A           92 DLLPGIGRLLCQLKNENIKIGLASSSRN--APKILRRLAIIDDFHAIV  137 (233)
T ss_dssp             GSCTTHHHHHHHHHHTTCEEEECCSCTT--HHHHHHHTTCTTTCSEEC
T ss_pred             CcCcCHHHHHHHHHHCCCcEEEEcCchh--HHHHHHHcCcHhhcCEEe
Confidence            4689999999999999999999999754  777888999875444443


No 70 
>2gmw_A D,D-heptose 1,7-bisphosphate phosphatase; Zn-binding protein, hydrolase; 1.50A {Escherichia coli} SCOP: c.108.1.19 PDB: 3esq_A 3esr_A 3l1u_A 3l1v_A 3l8e_A 3l8f_A 3l8g_A*
Probab=71.34  E-value=4  Score=39.79  Aligned_cols=42  Identities=12%  Similarity=0.113  Sum_probs=37.0

Q ss_pred             CCCCcchHHHHHHHhhCCCcEEEEcCCC---------------HHHHHHHHHHcccc
Q 003952          673 CPIREDSAKILSELKNSSQDLAMITGDQ---------------ALTACYVASQVHIV  714 (784)
Q Consensus       673 d~lr~da~~~I~~L~~agi~v~MITGDn---------------~~TA~~VA~~~gI~  714 (784)
                      -++.|++.++|+.|++.|+++.++|+..               ...+..+.++.|+.
T Consensus        49 ~~~~pg~~e~L~~L~~~G~~~~ivTn~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~  105 (211)
T 2gmw_A           49 FEFIDGVIDAMRELKKMGFALVVVTNQSGIARGKFTEAQFETLTEWMDWSLADRDVD  105 (211)
T ss_dssp             CCBCTTHHHHHHHHHHTTCEEEEEEECTHHHHTSSCHHHHHHHHHHHHHHHHHTTCC
T ss_pred             CcCCcCHHHHHHHHHHCCCeEEEEECcCCcCCCccCHHHHHHHHHHHHHHHHHcCCc
Confidence            3678999999999999999999999998               46777888888875


No 71 
>1l7m_A Phosphoserine phosphatase; rossmann fold, four-helix bundle, B-hairpin, structural genomics, BSGC structure funded by NIH; 1.48A {Methanocaldococcus jannaschii} SCOP: c.108.1.4 PDB: 1f5s_A 1l7n_A 1l7p_A* 1l7o_A* 1j97_A*
Probab=71.33  E-value=2.4  Score=40.41  Aligned_cols=42  Identities=17%  Similarity=0.265  Sum_probs=38.1

Q ss_pred             CCCCcchHHHHHHHhhCCCcEEEEcCCCHHHHHHHHHHcccc
Q 003952          673 CPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIV  714 (784)
Q Consensus       673 d~lr~da~~~I~~L~~agi~v~MITGDn~~TA~~VA~~~gI~  714 (784)
                      .++.|+++++++.|++.|+++.++||.....+..+.+++|+.
T Consensus        75 ~~l~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~~~~~~~~  116 (211)
T 1l7m_A           75 ITPTEGAEETIKELKNRGYVVAVVSGGFDIAVNKIKEKLGLD  116 (211)
T ss_dssp             CCBCTTHHHHHHHHHHTTEEEEEEEEEEHHHHHHHHHHHTCS
T ss_pred             CCCCccHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHcCCC
Confidence            467789999999999999999999999998888889998874


No 72 
>2r8e_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; YRBI, divalent metal, HAD superfamily, KDO 8-P, hydrolase; 1.40A {Escherichia coli O6} PDB: 2r8x_A 2r8y_A 2r8z_A 3hyc_A 3i6b_A*
Probab=70.91  E-value=3  Score=39.88  Aligned_cols=34  Identities=21%  Similarity=0.120  Sum_probs=32.2

Q ss_pred             HHHHHHhhCCCcEEEEcCCCHHHHHHHHHHcccc
Q 003952          681 KILSELKNSSQDLAMITGDQALTACYVASQVHIV  714 (784)
Q Consensus       681 ~~I~~L~~agi~v~MITGDn~~TA~~VA~~~gI~  714 (784)
                      .+|+.|++.|+++.++||++...+..+++++|+.
T Consensus        60 ~~l~~L~~~g~~v~ivT~~~~~~~~~~l~~lgl~   93 (188)
T 2r8e_A           60 YGIRCALTSDIEVAIITGRKAKLVEDRCATLGIT   93 (188)
T ss_dssp             HHHHHHHTTTCEEEEECSSCCHHHHHHHHHHTCC
T ss_pred             HHHHHHHHCCCeEEEEeCCChHHHHHHHHHcCCc
Confidence            4899999999999999999999999999999985


No 73 
>2fea_A 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; 2633731, structural genomics, joint center for structural GE JCSG; HET: MSE; 2.00A {Bacillus subtilis} SCOP: c.108.1.20
Probab=69.63  E-value=2.1  Score=42.37  Aligned_cols=42  Identities=19%  Similarity=0.244  Sum_probs=37.3

Q ss_pred             CCCCcchHHHHHHHhhCCCcEEEEcCCCHHHHHHHHHHcccccC
Q 003952          673 CPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTK  716 (784)
Q Consensus       673 d~lr~da~~~I~~L~~agi~v~MITGDn~~TA~~VA~~~gI~~~  716 (784)
                      -++.|++.++++.|+++|+++.++|+.....+..+.+  |+...
T Consensus        76 ~~~~pg~~~~l~~L~~~g~~~~ivS~~~~~~~~~~l~--~l~~~  117 (236)
T 2fea_A           76 AKIREGFREFVAFINEHEIPFYVISGGMDFFVYPLLE--GIVEK  117 (236)
T ss_dssp             CCBCTTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHHT--TTSCG
T ss_pred             CCCCccHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHh--cCCCC
Confidence            4789999999999999999999999999988888888  77443


No 74 
>3nvb_A Uncharacterized protein; protein FKBH, protein fkbhstructural genomics, PSI-2, protei structure initiative; 1.71A {Bacteroides fragilis} PDB: 3slr_A
Probab=69.43  E-value=4.3  Score=43.91  Aligned_cols=79  Identities=14%  Similarity=0.014  Sum_probs=53.3

Q ss_pred             hhHHHHHHHHhhccCeEEEEEEEeCCCCChh-hHhhhhhhhccCCcEEEEEEeecCCC-----CcchHHHHHHHhhCCCc
Q 003952          619 SSYIETYKKYTHQGSRVLALAFKSLPDMTVS-DARSLHRDEVENGLTFAGFAVFNCPI-----REDSAKILSELKNSSQD  692 (784)
Q Consensus       619 ~~~~~~~~~~~~~G~Rvlala~k~l~~~~~~-~~~~~~r~~~E~~l~flG~l~~~d~l-----r~da~~~I~~L~~agi~  692 (784)
                      ..+...+..+..+|.|++.+-   ++.--.+ ... ...+  + .      +-+.|..     -|++++.|+.|+++|++
T Consensus       208 ~~~~~~~~~l~~~~iK~lv~D---vDnTL~~G~l~-~dG~--~-~------~~~~dg~g~g~~ypgv~e~L~~Lk~~Gi~  274 (387)
T 3nvb_A          208 SRTIDIIAAIQGKFKKCLILD---LDNTIWGGVVG-DDGW--E-N------IQVGHGLGIGKAFTEFQEWVKKLKNRGII  274 (387)
T ss_dssp             HHHHHHHHHHTTCCCCEEEEC---CBTTTBBSCHH-HHCG--G-G------SBCSSSSSTHHHHHHHHHHHHHHHHTTCE
T ss_pred             HHHHHHHHHHHhCCCcEEEEc---CCCCCCCCeec-CCCc--e-e------EEeccCccccccCHHHHHHHHHHHHCCCE
Confidence            445567788899999998874   2210000 000 0000  0 0      1144433     37899999999999999


Q ss_pred             EEEEcCCCHHHHHHHHHH
Q 003952          693 LAMITGDQALTACYVASQ  710 (784)
Q Consensus       693 v~MITGDn~~TA~~VA~~  710 (784)
                      +.++|+-+...+..+.++
T Consensus       275 laI~Snn~~~~v~~~l~~  292 (387)
T 3nvb_A          275 IAVCSKNNEGKAKEPFER  292 (387)
T ss_dssp             EEEEEESCHHHHHHHHHH
T ss_pred             EEEEcCCCHHHHHHHHhh
Confidence            999999999999999998


No 75 
>1wr8_A Phosphoglycolate phosphatase; alpha / beta core domain, HAD superfamily, structural genomi structural genomics/proteomics initiative, RSGI; 1.60A {Pyrococcus horikoshii} SCOP: c.108.1.10
Probab=69.37  E-value=4.3  Score=40.08  Aligned_cols=41  Identities=12%  Similarity=0.139  Sum_probs=37.6

Q ss_pred             CCCcchHHHHHHHhhCCCcEEEEcCCCHHHHHHHHHHcccc
Q 003952          674 PIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIV  714 (784)
Q Consensus       674 ~lr~da~~~I~~L~~agi~v~MITGDn~~TA~~VA~~~gI~  714 (784)
                      .+.+.+.++|++|++.|++++++||-....+..+.+++|+.
T Consensus        20 ~i~~~~~~al~~l~~~G~~v~i~TGR~~~~~~~~~~~l~~~   60 (231)
T 1wr8_A           20 MIHEKALEAIRRAESLGIPIMLVTGNTVQFAEAASILIGTS   60 (231)
T ss_dssp             CBCHHHHHHHHHHHHTTCCEEEECSSCHHHHHHHHHHHTCC
T ss_pred             cCCHHHHHHHHHHHHCCCEEEEEcCCChhHHHHHHHHcCCC
Confidence            46788999999999999999999999999999999999864


No 76 
>2w43_A Hypothetical 2-haloalkanoic acid dehalogenase; hydrolase, metabolic process; HET: MES; 1.66A {Sulfolobus tokodaii} PDB: 2w11_A
Probab=69.27  E-value=4.3  Score=38.60  Aligned_cols=81  Identities=10%  Similarity=-0.012  Sum_probs=54.5

Q ss_pred             CCCCcchHHHHHHHhhCCCcEEEEcCCCHHHHHHHHHHcccccCCcEEEecCCCCCeeEEeCCCcccccccchh----hh
Q 003952          673 CPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLILCPVKNGKVYEWVSPDETEKIQYSEK----EV  748 (784)
Q Consensus       673 d~lr~da~~~I~~L~~agi~v~MITGDn~~TA~~VA~~~gI~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~----~~  748 (784)
                      .++.|++.+ ++.|++. +++.++|+.+...+..+.+.+|+......+...+..+.           .-| ++.    ..
T Consensus        73 ~~~~~~~~~-l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~-----------~Kp-~~~~~~~~~  138 (201)
T 2w43_A           73 LKAYEDTKY-LKEISEI-AEVYALSNGSINEVKQHLERNGLLRYFKGIFSAESVKE-----------YKP-SPKVYKYFL  138 (201)
T ss_dssp             CEECGGGGG-HHHHHHH-SEEEEEESSCHHHHHHHHHHTTCGGGCSEEEEGGGGTC-----------CTT-CHHHHHHHH
T ss_pred             cccCCChHH-HHHHHhC-CeEEEEeCcCHHHHHHHHHHCCcHHhCcEEEehhhcCC-----------CCC-CHHHHHHHH
Confidence            356799999 9999999 99999999999999999999998754444442211000           000 111    12


Q ss_pred             hccCCCeeEEEechhHHHHh
Q 003952          749 EGLTDAHDLCIGGDCFEMLQ  768 (784)
Q Consensus       749 ~~l~~~~~l~~tGd~l~~l~  768 (784)
                      +++. ..++++.||+.+.+.
T Consensus       139 ~~~~-~~~~~~vGD~~~Di~  157 (201)
T 2w43_A          139 DSIG-AKEAFLVSSNAFDVI  157 (201)
T ss_dssp             HHHT-CSCCEEEESCHHHHH
T ss_pred             HhcC-CCcEEEEeCCHHHhH
Confidence            2333 446888899988774


No 77 
>1rku_A Homoserine kinase; phosphoserine phosphatase, phosphoserine:homoserine phosphotransferase, THRH, phosphoserine phosphoryl donor; 1.47A {Pseudomonas aeruginosa} SCOP: c.108.1.11 PDB: 1rkv_A
Probab=69.22  E-value=3.5  Score=39.47  Aligned_cols=42  Identities=10%  Similarity=0.036  Sum_probs=38.9

Q ss_pred             CCCCcchHHHHHHHhhCCCcEEEEcCCCHHHHHHHHHHccccc
Q 003952          673 CPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVT  715 (784)
Q Consensus       673 d~lr~da~~~I~~L~~agi~v~MITGDn~~TA~~VA~~~gI~~  715 (784)
                      -++.|++.+.++.|++. +++.++|+.+...+..+.+.+|+..
T Consensus        68 ~~~~~g~~~~l~~l~~~-~~~~i~s~~~~~~~~~~l~~~gl~~  109 (206)
T 1rku_A           68 LKPLEGAVEFVDWLRER-FQVVILSDTFYEFSQPLMRQLGFPT  109 (206)
T ss_dssp             CCCCTTHHHHHHHHHTT-SEEEEEEEEEHHHHHHHHHHTTCCC
T ss_pred             cCCCccHHHHHHHHHhc-CcEEEEECChHHHHHHHHHHcCCcc
Confidence            36799999999999999 9999999999999999999999864


No 78 
>3qxg_A Inorganic pyrophosphatase; hydrolase, magnesium binding site, NEW YORK research center for structural genomics; HET: TLA; 1.24A {Bacteroides thetaiotaomicron} PDB: 3qu2_A* 3qx7_A 3quq_A* 3r9k_A 3qut_A 3qu9_A* 3qu7_A 3qu5_A 3qyp_A 3quc_A 3qub_A 3qu4_A
Probab=69.10  E-value=6.9  Score=38.38  Aligned_cols=44  Identities=11%  Similarity=0.077  Sum_probs=37.8

Q ss_pred             CCCCcchHHHHHHHhhCCCcEEEEcCCCHHHHHHHHHHcccccCC
Q 003952          673 CPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKP  717 (784)
Q Consensus       673 d~lr~da~~~I~~L~~agi~v~MITGDn~~TA~~VA~~~gI~~~~  717 (784)
                      .++.|++.+.++.|++.|+++.++|+.....+....+. |+....
T Consensus       108 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~-~l~~~f  151 (243)
T 3qxg_A          108 AERMPGAWELLQKVKSEGLTPMVVTGSGQLSLLERLEH-NFPGMF  151 (243)
T ss_dssp             CCBCTTHHHHHHHHHHTTCEEEEECCCCCHHHHTTHHH-HSTTTC
T ss_pred             CCCCCCHHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHH-hHHHhc
Confidence            35789999999999999999999999988888777777 887544


No 79 
>2fpr_A Histidine biosynthesis bifunctional protein HISB; histidinola phosphate phosphatase, bifunctional enzyme structural genomics; 1.70A {Escherichia coli} SCOP: c.108.1.19 PDB: 2fps_A 2fpu_A* 2fpx_A 2fpw_A*
Probab=66.76  E-value=3.9  Score=38.70  Aligned_cols=42  Identities=14%  Similarity=0.113  Sum_probs=36.7

Q ss_pred             CCCCcchHHHHHHHhhCCCcEEEEcCC---------------CHHHHHHHHHHcccc
Q 003952          673 CPIREDSAKILSELKNSSQDLAMITGD---------------QALTACYVASQVHIV  714 (784)
Q Consensus       673 d~lr~da~~~I~~L~~agi~v~MITGD---------------n~~TA~~VA~~~gI~  714 (784)
                      -++.|++.++|+.|++.|+++.++|+-               ....+..+.++.|+.
T Consensus        41 ~~~~pg~~e~L~~L~~~G~~l~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~   97 (176)
T 2fpr_A           41 LAFEPGVIPQLLKLQKAGYKLVMITNQDGLGTQSFPQADFDGPHNLMMQIFTSQGVQ   97 (176)
T ss_dssp             CCBCTTHHHHHHHHHHTTEEEEEEEECTTTTBTTBCHHHHHHHHHHHHHHHHHTTCC
T ss_pred             CcCCccHHHHHHHHHHCCCEEEEEECCccccccccchHhhhhhHHHHHHHHHHcCCC
Confidence            467899999999999999999999997               456777888888885


No 80 
>1qq5_A Protein (L-2-haloacid dehalogenase); hydrolase; 1.52A {Xanthobacter autotrophicus} SCOP: c.108.1.1 PDB: 1qq6_A* 1qq7_A* 1aq6_A
Probab=66.62  E-value=7.5  Score=38.52  Aligned_cols=47  Identities=13%  Similarity=0.104  Sum_probs=40.0

Q ss_pred             CCCCcchHHHHHHHhhCCCcEEEEcCCCHHHHHHHHHHcccccCCcEEE
Q 003952          673 CPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLIL  721 (784)
Q Consensus       673 d~lr~da~~~I~~L~~agi~v~MITGDn~~TA~~VA~~~gI~~~~~~il  721 (784)
                      .++.|++.++++.|+  |+++.++|+.+...+..+.+.+|+......+.
T Consensus        92 ~~~~~~~~~~l~~l~--g~~~~i~t~~~~~~~~~~l~~~gl~~~f~~~~  138 (253)
T 1qq5_A           92 LTPYPDAAQCLAELA--PLKRAILSNGAPDMLQALVANAGLTDSFDAVI  138 (253)
T ss_dssp             CCBCTTHHHHHHHHT--TSEEEEEESSCHHHHHHHHHHTTCGGGCSEEE
T ss_pred             CCCCccHHHHHHHHc--CCCEEEEeCcCHHHHHHHHHHCCchhhccEEE
Confidence            367899999999999  99999999999999999999999875444443


No 81 
>2o2x_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; 1.50A {Mesorhizobium loti} SCOP: c.108.1.19
Probab=66.46  E-value=4.2  Score=39.72  Aligned_cols=42  Identities=5%  Similarity=0.066  Sum_probs=37.1

Q ss_pred             CCCCcchHHHHHHHhhCCCcEEEEcCCCH---------------HHHHHHHHHcccc
Q 003952          673 CPIREDSAKILSELKNSSQDLAMITGDQA---------------LTACYVASQVHIV  714 (784)
Q Consensus       673 d~lr~da~~~I~~L~~agi~v~MITGDn~---------------~TA~~VA~~~gI~  714 (784)
                      .++.|++.++|+.|++.|+++.++|+-..               ..+..+.+++|+.
T Consensus        55 ~~~~~g~~e~L~~L~~~G~~~~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~  111 (218)
T 2o2x_A           55 IVLRPQMLPAIATANRAGIPVVVVTNQSGIARGYFGWSAFAAVNGRVLELLREEGVF  111 (218)
T ss_dssp             CCBCGGGHHHHHHHHHHTCCEEEEEECHHHHTTSCCHHHHHHHHHHHHHHHHHTTCC
T ss_pred             CeECcCHHHHHHHHHHCCCEEEEEcCcCCCCcccccHHHHHHHHHHHHHHHHHcCCc
Confidence            57889999999999999999999999877               5777888888873


No 82 
>3l8h_A Putative haloacid dehalogenase-like hydrolase; HAD superfamily, GMHB, D-glycero-D-manno-heptose-1, 7-bispho phosphatase; HET: FX1; 1.68A {Bordetella bronchiseptica}
Probab=66.40  E-value=5.2  Score=37.43  Aligned_cols=39  Identities=10%  Similarity=0.065  Sum_probs=33.6

Q ss_pred             CCCcchHHHHHHHhhCCCcEEEEcCCCH---------------HHHHHHHHHcc
Q 003952          674 PIREDSAKILSELKNSSQDLAMITGDQA---------------LTACYVASQVH  712 (784)
Q Consensus       674 ~lr~da~~~I~~L~~agi~v~MITGDn~---------------~TA~~VA~~~g  712 (784)
                      ++.|++.++++.|++.|+++.++|+...               ..+..+.+++|
T Consensus        27 ~~~~g~~~~l~~L~~~g~~~~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~g   80 (179)
T 3l8h_A           27 IALPGSLQAIARLTQADWTVVLATNQSGLARGLFDTATLNAIHDKMHRALAQMG   80 (179)
T ss_dssp             CBCTTHHHHHHHHHHTTCEEEEEEECTTTTTTSSCHHHHHHHHHHHHHHHHHTT
T ss_pred             eECcCHHHHHHHHHHCCCEEEEEECCCccccCcCCHHHHHHHHHHHHHHHHhCC
Confidence            6789999999999999999999999875               45566677777


No 83 
>2wf7_A Beta-PGM, beta-phosphoglucomutase; transition state analogue, haloacid dehalogenase superfamily, isomerase, phosphotransferase; HET: G7P; 1.05A {Lactococcus lactis} PDB: 1o03_A* 1z4n_A* 1z4o_A* 1zol_A 2wf5_A* 2wf6_A* 1o08_A* 2wf8_A* 2wf9_A* 2wfa_A 2whe_A 1lvh_A* 3fm9_A
Probab=65.78  E-value=4.5  Score=38.71  Aligned_cols=45  Identities=9%  Similarity=0.201  Sum_probs=35.8

Q ss_pred             CCCcchHHHHHHHhhCCCcEEEEcCCCHHHHHHHHHHcccccCCcEE
Q 003952          674 PIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLI  720 (784)
Q Consensus       674 ~lr~da~~~I~~L~~agi~v~MITGDn~~TA~~VA~~~gI~~~~~~i  720 (784)
                      ++.|++.+.++.|++.|+++.++|++  ..+..+.+.+|+......+
T Consensus        91 ~~~~~~~~~l~~l~~~g~~~~i~t~~--~~~~~~l~~~~l~~~f~~~  135 (221)
T 2wf7_A           91 DVYPGILQLLKDLRSNKIKIALASAS--KNGPFLLERMNLTGYFDAI  135 (221)
T ss_dssp             GBCTTHHHHHHHHHHTTCEEEECCCC--TTHHHHHHHTTCGGGCSEE
T ss_pred             CCCCCHHHHHHHHHHCCCeEEEEcCc--HHHHHHHHHcChHHHcceE
Confidence            46799999999999999999999998  3456677888886543333


No 84 
>3qnm_A Haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 1.70A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0
Probab=64.84  E-value=5.6  Score=38.53  Aligned_cols=47  Identities=9%  Similarity=0.030  Sum_probs=40.2

Q ss_pred             CCCcchHHHHHHHhhCCCcEEEEcCCCHHHHHHHHHHcccccCCcEEE
Q 003952          674 PIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLIL  721 (784)
Q Consensus       674 ~lr~da~~~I~~L~~agi~v~MITGDn~~TA~~VA~~~gI~~~~~~il  721 (784)
                      ++.|++.+.++.|+ .|+++.++|+.....+..+-+.+|+......+.
T Consensus       107 ~~~~~~~~~l~~l~-~g~~~~i~sn~~~~~~~~~l~~~~l~~~f~~~~  153 (240)
T 3qnm_A          107 GLMPHAKEVLEYLA-PQYNLYILSNGFRELQSRKMRSAGVDRYFKKII  153 (240)
T ss_dssp             CBSTTHHHHHHHHT-TTSEEEEEECSCHHHHHHHHHHHTCGGGCSEEE
T ss_pred             CcCccHHHHHHHHH-cCCeEEEEeCCchHHHHHHHHHcChHhhceeEE
Confidence            56899999999999 999999999999999999999999875444444


No 85 
>3ewi_A N-acylneuraminate cytidylyltransferase; beta barrel, HAD-like, rossmannoid fold, nucleotidyltransferase, nucleus; 1.90A {Mus musculus}
Probab=64.65  E-value=1.6  Score=41.35  Aligned_cols=44  Identities=14%  Similarity=-0.047  Sum_probs=34.8

Q ss_pred             CcEEEEEEeecCCCCcchHHHHHHHhhCCCcEEEEcCCCHHHHHHHHH--Hccc
Q 003952          662 GLTFAGFAVFNCPIREDSAKILSELKNSSQDLAMITGDQALTACYVAS--QVHI  713 (784)
Q Consensus       662 ~l~flG~l~~~d~lr~da~~~I~~L~~agi~v~MITGDn~~TA~~VA~--~~gI  713 (784)
                      +...++.+.++|.      .+|+.|++.|+++.|+||+  ..+..+++  ++||
T Consensus        30 ~g~~~~~f~~~D~------~~L~~Lk~~Gi~~~I~Tg~--~~~~~~l~~l~lgi   75 (168)
T 3ewi_A           30 DQKEIISYDVKDA------IGISLLKKSGIEVRLISER--ACSKQTLSALKLDC   75 (168)
T ss_dssp             SCCCEEEEEHHHH------HHHHHHHHTTCEEEEECSS--CCCHHHHHTTCCCC
T ss_pred             CCCEEEEEecCcH------HHHHHHHHCCCEEEEEeCc--HHHHHHHHHhCCCc
Confidence            3455666666665      3899999999999999999  67888899  6676


No 86 
>1xvi_A MPGP, YEDP, putative mannosyl-3-phosphoglycerate phosphatase; hypothetical protein, conserved protein, phophatase-like domain; HET: 1PE PG4 PGE; 2.26A {Escherichia coli K12} SCOP: c.108.1.10
Probab=62.74  E-value=8.3  Score=39.20  Aligned_cols=40  Identities=10%  Similarity=0.201  Sum_probs=36.4

Q ss_pred             CCcchHHHHHHHhhCCCcEEEEcCCCHHHHHHHHHHcccc
Q 003952          675 IREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIV  714 (784)
Q Consensus       675 lr~da~~~I~~L~~agi~v~MITGDn~~TA~~VA~~~gI~  714 (784)
                      +-+.+.++|++|++.|+++++.||-....+..+.+++|+.
T Consensus        27 ~~~~~~~~l~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~   66 (275)
T 1xvi_A           27 DWQPAAPWLTRLREANVPVILCSSKTSAEMLYLQKTLGLQ   66 (275)
T ss_dssp             SCCTTHHHHHHHHHTTCCEEEECSSCHHHHHHHHHHTTCT
T ss_pred             CCHHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCC
Confidence            3467899999999999999999999999999999999874


No 87 
>3ed5_A YFNB; APC60080, bacillus subtilis subsp. subtilis STR. 168, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.72A {Bacillus subtilis} PDB: 3i76_A
Probab=62.51  E-value=8.3  Score=37.27  Aligned_cols=48  Identities=15%  Similarity=0.122  Sum_probs=41.0

Q ss_pred             CCCCcchHHHHHHHhhCCCcEEEEcCCCHHHHHHHHHHcccccCCcEEE
Q 003952          673 CPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLIL  721 (784)
Q Consensus       673 d~lr~da~~~I~~L~~agi~v~MITGDn~~TA~~VA~~~gI~~~~~~il  721 (784)
                      .++.|++.+.++.|++. +++.++|+.....+..+.+..|+......+.
T Consensus       102 ~~~~~~~~~~l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~l~~~f~~~~  149 (238)
T 3ed5_A          102 HQLIDGAFDLISNLQQQ-FDLYIVTNGVSHTQYKRLRDSGLFPFFKDIF  149 (238)
T ss_dssp             CCBCTTHHHHHHHHHTT-SEEEEEECSCHHHHHHHHHHTTCGGGCSEEE
T ss_pred             CCCCccHHHHHHHHHhc-CeEEEEeCCCHHHHHHHHHHcChHhhhheEE
Confidence            36789999999999999 9999999999999999999999875444444


No 88 
>3l5k_A Protein GS1, haloacid dehalogenase-like hydrolase domain- containing protein 1A; HDHD1A, haloacid dehalogenase-like hydrolase domain containing 1A; 2.00A {Homo sapiens}
Probab=61.49  E-value=14  Score=36.30  Aligned_cols=44  Identities=9%  Similarity=0.163  Sum_probs=34.4

Q ss_pred             CCCCcchHHHHHHHhhCCCcEEEEcCCCHHHHHHHH-HHcccccC
Q 003952          673 CPIREDSAKILSELKNSSQDLAMITGDQALTACYVA-SQVHIVTK  716 (784)
Q Consensus       673 d~lr~da~~~I~~L~~agi~v~MITGDn~~TA~~VA-~~~gI~~~  716 (784)
                      .++.|++.++++.|++.|+++.++|+.....+...- +..|+...
T Consensus       111 ~~~~~~~~~~l~~l~~~g~~~~i~sn~~~~~~~~~l~~~~~l~~~  155 (250)
T 3l5k_A          111 AALMPGAEKLIIHLRKHGIPFALATSSRSASFDMKTSRHKEFFSL  155 (250)
T ss_dssp             CCBCTTHHHHHHHHHHTTCCEEEECSCCHHHHHHHTTTCHHHHTT
T ss_pred             CCCCCCHHHHHHHHHhCCCcEEEEeCCCHHHHHHHHHhccCHHhh
Confidence            367899999999999999999999999876655443 33466543


No 89 
>3pdw_A Uncharacterized hydrolase YUTF; structural genomics, PSI2, NYSGXRC, protein structure initia YORK SGX research center for structural genomics; 1.60A {Bacillus subtilis} SCOP: c.108.1.0
Probab=61.40  E-value=7  Score=39.19  Aligned_cols=40  Identities=13%  Similarity=0.132  Sum_probs=32.8

Q ss_pred             CCcchHHHHHHHhhCCCcEEEEcC---CCHHHHHHHHHHcccc
Q 003952          675 IREDSAKILSELKNSSQDLAMITG---DQALTACYVASQVHIV  714 (784)
Q Consensus       675 lr~da~~~I~~L~~agi~v~MITG---Dn~~TA~~VA~~~gI~  714 (784)
                      +=++++++|++|+++|++++++||   -.........+++|+.
T Consensus        23 ~~~~~~~ai~~l~~~Gi~v~laTgrs~r~~~~~~~~l~~lg~~   65 (266)
T 3pdw_A           23 KIEEACEFVRTLKDRGVPYLFVTNNSSRTPKQVADKLVSFDIP   65 (266)
T ss_dssp             HHHHHHHHHHHHHHTTCCEEEEESCCSSCHHHHHHHHHHTTCC
T ss_pred             eCccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCC
Confidence            346899999999999999999998   5666666677778874


No 90 
>1rkq_A Hypothetical protein YIDA; two domain structure with beta-alpha sandwich. stucture contains A magnesium ION., PSI, protein structure initiative; 1.40A {Escherichia coli} SCOP: c.108.1.10
Probab=60.93  E-value=6.1  Score=40.36  Aligned_cols=41  Identities=10%  Similarity=0.174  Sum_probs=37.9

Q ss_pred             CCCcchHHHHHHHhhCCCcEEEEcCCCHHHHHHHHHHcccc
Q 003952          674 PIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIV  714 (784)
Q Consensus       674 ~lr~da~~~I~~L~~agi~v~MITGDn~~TA~~VA~~~gI~  714 (784)
                      .+-+.+.++|++|++.|+++++.||-....+..+.+++|+.
T Consensus        22 ~i~~~~~~aL~~l~~~Gi~vviaTGR~~~~~~~~~~~l~l~   62 (282)
T 1rkq_A           22 TISPAVKNAIAAARARGVNVVLTTGRPYAGVHNYLKELHME   62 (282)
T ss_dssp             CCCHHHHHHHHHHHHTTCEEEEECSSCGGGTHHHHHHTTCC
T ss_pred             cCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHhCCC
Confidence            46788999999999999999999999999999999999874


No 91 
>3qgm_A P-nitrophenyl phosphatase (PHO2); structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 2.00A {Archaeoglobus fulgidus} SCOP: c.108.1.0
Probab=60.78  E-value=3.8  Score=41.19  Aligned_cols=43  Identities=5%  Similarity=0.026  Sum_probs=34.8

Q ss_pred             cCCCCcchHHHHHHHhhCCCcEEEEcC---CCHHHHHHHHHHcccc
Q 003952          672 NCPIREDSAKILSELKNSSQDLAMITG---DQALTACYVASQVHIV  714 (784)
Q Consensus       672 ~d~lr~da~~~I~~L~~agi~v~MITG---Dn~~TA~~VA~~~gI~  714 (784)
                      .+.+=|+++++|++|++.|++++++||   -.........+++|+.
T Consensus        22 ~~~~~~~~~~ai~~l~~~Gi~v~l~Tgr~~r~~~~~~~~l~~lg~~   67 (268)
T 3qgm_A           22 SVTPIPEGVEGVKKLKELGKKIIFVSNNSTRSRRILLERLRSFGLE   67 (268)
T ss_dssp             TTEECHHHHHHHHHHHHTTCEEEEEECCSSSCHHHHHHHHHHTTCC
T ss_pred             CCEeCcCHHHHHHHHHHcCCeEEEEeCcCCCCHHHHHHHHHHCCCC
Confidence            334457899999999999999999999   5666666677778874


No 92 
>2hoq_A Putative HAD-hydrolase PH1655; haloacid dehalogenase, structural genomics, NPPSFA, national on protein structural and functional analyses; 1.70A {Pyrococcus horikoshii}
Probab=60.19  E-value=9.5  Score=37.31  Aligned_cols=48  Identities=15%  Similarity=0.124  Sum_probs=41.1

Q ss_pred             CCCcchHHHHHHHhhCCCcEEEEcCCCHHHHHHHHHHcccccCCcEEE
Q 003952          674 PIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLIL  721 (784)
Q Consensus       674 ~lr~da~~~I~~L~~agi~v~MITGDn~~TA~~VA~~~gI~~~~~~il  721 (784)
                      ++.|++.+.++.|++.|+++.++|+.....+..+.+..|+......+.
T Consensus        94 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f~~~~  141 (241)
T 2hoq_A           94 REVPGARKVLIRLKELGYELGIITDGNPVKQWEKILRLELDDFFEHVI  141 (241)
T ss_dssp             CBCTTHHHHHHHHHHHTCEEEEEECSCHHHHHHHHHHTTCGGGCSEEE
T ss_pred             CCCccHHHHHHHHHHCCCEEEEEECCCchhHHHHHHHcCcHhhccEEE
Confidence            568999999999999999999999999988999999999875433333


No 93 
>2zos_A MPGP, mannosyl-3-phosphoglycerate phosphatase; haloacid dehalogenase like hydrolase, mannosylglycerate, cytoplasm, hydrolase, magnesium; 1.70A {Pyrococcus horikoshii} PDB: 1wzc_A
Probab=60.07  E-value=4.4  Score=40.64  Aligned_cols=38  Identities=13%  Similarity=0.270  Sum_probs=35.0

Q ss_pred             cchHHHHHHHhhCCCcEEEEcCCCHHHHHHHHHHcccc
Q 003952          677 EDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIV  714 (784)
Q Consensus       677 ~da~~~I~~L~~agi~v~MITGDn~~TA~~VA~~~gI~  714 (784)
                      +.+.++|++|++.|++++++||-....+..+.+++|+.
T Consensus        20 ~~~~~~l~~l~~~g~~~~i~Tgr~~~~~~~~~~~~~~~   57 (249)
T 2zos_A           20 DPAKPIIEELKDMGFEIIFNSSKTRAEQEYYRKELEVE   57 (249)
T ss_dssp             GGGHHHHHHHHHTTEEEEEBCSSCHHHHHHHHHHHTCC
T ss_pred             HHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCC
Confidence            45999999999999999999999999999999998873


No 94 
>3cnh_A Hydrolase family protein; NP_295428.1, predicted hydrolase of haloacid dehalogenase-LI superfamily; HET: MSE PG4; 1.66A {Deinococcus radiodurans R1}
Probab=59.48  E-value=11  Score=35.55  Aligned_cols=47  Identities=6%  Similarity=0.024  Sum_probs=40.3

Q ss_pred             CCCcchHHHHHHHhhCCCcEEEEcCCCHHHHHHHHHHcccccCCcEEE
Q 003952          674 PIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLIL  721 (784)
Q Consensus       674 ~lr~da~~~I~~L~~agi~v~MITGDn~~TA~~VA~~~gI~~~~~~il  721 (784)
                      ++.|++.+.++.|++.| ++.++|+.+...+..+.+.+|+......+.
T Consensus        86 ~~~~~~~~~l~~l~~~g-~~~i~s~~~~~~~~~~l~~~~~~~~f~~~~  132 (200)
T 3cnh_A           86 QPRPEVLALARDLGQRY-RMYSLNNEGRDLNEYRIRTFGLGEFLLAFF  132 (200)
T ss_dssp             CBCHHHHHHHHHHTTTS-EEEEEECCCHHHHHHHHHHHTGGGTCSCEE
T ss_pred             ccCccHHHHHHHHHHcC-CEEEEeCCcHHHHHHHHHhCCHHHhcceEE
Confidence            46799999999999999 999999999999999999999875433333


No 95 
>2pq0_A Hypothetical conserved protein GK1056; hyopthetical protein, structural genomics, unknown function; 2.60A {Geobacillus kaustophilus} PDB: 2qyh_A
Probab=59.31  E-value=6  Score=39.52  Aligned_cols=40  Identities=23%  Similarity=0.230  Sum_probs=36.7

Q ss_pred             CCCcchHHHHHHHhhCCCcEEEEcCCCHHHHHHHHHHccc
Q 003952          674 PIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHI  713 (784)
Q Consensus       674 ~lr~da~~~I~~L~~agi~v~MITGDn~~TA~~VA~~~gI  713 (784)
                      .+.+.+.++|++|++.|+++++.||-....+..+.+++|+
T Consensus        20 ~i~~~~~~al~~l~~~G~~~~~aTGR~~~~~~~~~~~l~~   59 (258)
T 2pq0_A           20 QLPLSTIEAVRRLKQSGVYVAIATGRAPFMFEHVRKQLGI   59 (258)
T ss_dssp             CCCHHHHHHHHHHHHTTCEEEEECSSCGGGSHHHHHHHTC
T ss_pred             ccCHHHHHHHHHHHHCCCEEEEECCCChHHHHHHHHhcCC
Confidence            5678899999999999999999999999999999999875


No 96 
>3epr_A Hydrolase, haloacid dehalogenase-like family; structural genomics, unknown function, HAD superfamily hydro PSI-2; 1.55A {Streptococcus agalactiae serogroup V} SCOP: c.108.1.14 PDB: 1ys9_A 1wvi_A 1ydf_A
Probab=58.56  E-value=5.4  Score=40.11  Aligned_cols=40  Identities=8%  Similarity=0.136  Sum_probs=35.4

Q ss_pred             CCCcchHHHHHHHhhCCCcEEEEc---CCCHHHHHHHHHHcccc
Q 003952          674 PIREDSAKILSELKNSSQDLAMIT---GDQALTACYVASQVHIV  714 (784)
Q Consensus       674 ~lr~da~~~I~~L~~agi~v~MIT---GDn~~TA~~VA~~~gI~  714 (784)
                      ++ |+++++|++++++|++++++|   |-.........+++|+.
T Consensus        22 ~i-~~~~eal~~l~~~G~~vvl~Tn~~gr~~~~~~~~l~~lg~~   64 (264)
T 3epr_A           22 RI-PAGERFIERLQEKGIPYMLVTNNTTRTPESVQEMLRGFNVE   64 (264)
T ss_dssp             EC-HHHHHHHHHHHHHTCCEEEEECCCSSCHHHHHHHHHTTTCC
T ss_pred             EC-cCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHCCCC
Confidence            56 899999999999999999999   77777888888888885


No 97 
>2zg6_A Putative uncharacterized protein ST2620, probable 2-haloalkanoic; probable 2-haloalkanoic acid dehalogenase, hydrolase, structural genomics; 2.40A {Sulfolobus tokodaii}
Probab=58.37  E-value=6.6  Score=38.06  Aligned_cols=47  Identities=13%  Similarity=0.171  Sum_probs=38.2

Q ss_pred             CCCcchHHHHHHHhhCCCcEEEEcCCCHHHHHHHHHHcccccCCcEEE
Q 003952          674 PIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLIL  721 (784)
Q Consensus       674 ~lr~da~~~I~~L~~agi~v~MITGDn~~TA~~VA~~~gI~~~~~~il  721 (784)
                      ++.|++.++++.|++.|+++.++|+... .+..+.+.+|+......+.
T Consensus        95 ~~~~~~~~~l~~l~~~g~~~~i~Tn~~~-~~~~~l~~~gl~~~f~~~~  141 (220)
T 2zg6_A           95 FLYDDTLEFLEGLKSNGYKLALVSNASP-RVKTLLEKFDLKKYFDALA  141 (220)
T ss_dssp             EECTTHHHHHHHHHTTTCEEEECCSCHH-HHHHHHHHHTCGGGCSEEC
T ss_pred             eECcCHHHHHHHHHHCCCEEEEEeCCcH-HHHHHHHhcCcHhHeeEEE
Confidence            4679999999999999999999999866 4778888899865433333


No 98 
>2i7d_A 5'(3')-deoxyribonucleotidase, cytosolic type; hydrolase; HET: DUR; 1.20A {Homo sapiens} PDB: 2jar_A* 2jao_A*
Probab=57.16  E-value=3.1  Score=39.77  Aligned_cols=41  Identities=7%  Similarity=-0.001  Sum_probs=35.0

Q ss_pred             CCCCcchHHHHHHHhhC-CCcEEEEcCCCHHHHHHHHHHccc
Q 003952          673 CPIREDSAKILSELKNS-SQDLAMITGDQALTACYVASQVHI  713 (784)
Q Consensus       673 d~lr~da~~~I~~L~~a-gi~v~MITGDn~~TA~~VA~~~gI  713 (784)
                      .++.|++.++++.|++. |+++.++|+-....+..+.+..|+
T Consensus        72 ~~~~~g~~e~L~~L~~~~g~~~~ivT~~~~~~~~~~l~~~gl  113 (193)
T 2i7d_A           72 LEPIPGALDAVREMNDLPDTQVFICTSPLLKYHHCVGEKYRW  113 (193)
T ss_dssp             CCBCTTHHHHHHHHHTSTTEEEEEEECCCSSCTTTHHHHHHH
T ss_pred             CccCcCHHHHHHHHHhCCCCeEEEEeCCChhhHHHHHHHhCc
Confidence            46789999999999999 999999999877777666776666


No 99 
>3pgv_A Haloacid dehalogenase-like hydrolase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: EPE; 2.39A {Klebsiella pneumoniae subsp}
Probab=57.03  E-value=7.5  Score=39.58  Aligned_cols=42  Identities=12%  Similarity=0.138  Sum_probs=38.5

Q ss_pred             CCCCcchHHHHHHHhhCCCcEEEEcCCCHHHHHHHHHHcccc
Q 003952          673 CPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIV  714 (784)
Q Consensus       673 d~lr~da~~~I~~L~~agi~v~MITGDn~~TA~~VA~~~gI~  714 (784)
                      ..+-+.+.++|++|++.|+++++.||-....+..+.+++|+.
T Consensus        37 ~~i~~~~~~al~~l~~~G~~v~iaTGR~~~~~~~~~~~l~~~   78 (285)
T 3pgv_A           37 HFLTPYAKETLKLLTARGINFVFATGRHYIDVGQIRDNLGIR   78 (285)
T ss_dssp             SCCCHHHHHHHHHHHTTTCEEEEECSSCGGGGHHHHHHHCSC
T ss_pred             CcCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHhcCCC
Confidence            356788999999999999999999999999999999999974


No 100
>2qlt_A (DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, saccharom cerevisiae, structural genomics, PSI-2, protein structure initiative; 1.60A {Saccharomyces cerevisiae}
Probab=56.60  E-value=15  Score=36.88  Aligned_cols=41  Identities=15%  Similarity=0.001  Sum_probs=37.2

Q ss_pred             CCCcchHHHHHHHhhC-CCcEEEEcCCCHHHHHHHHHHcccc
Q 003952          674 PIREDSAKILSELKNS-SQDLAMITGDQALTACYVASQVHIV  714 (784)
Q Consensus       674 ~lr~da~~~I~~L~~a-gi~v~MITGDn~~TA~~VA~~~gI~  714 (784)
                      .+.+++.+.++.|++. |+++.++|+.....+..+.+..|+.
T Consensus       114 ~~~~g~~~~L~~l~~~~g~~l~i~T~~~~~~~~~~l~~~~l~  155 (275)
T 2qlt_A          114 IEVPGAVKLCNALNALPKEKWAVATSGTRDMAKKWFDILKIK  155 (275)
T ss_dssp             EECTTHHHHHHHHHTSCGGGEEEECSSCHHHHHHHHHHHTCC
T ss_pred             CcCcCHHHHHHHHHhccCCeEEEEeCCCHHHHHHHHHHcCCC
Confidence            3479999999999999 9999999999999999999988875


No 101
>2b30_A Pvivax hypothetical protein; SGPP, structural genomics, PSI, protein structure initiative; 2.70A {Plasmodium vivax} SCOP: c.108.1.10
Probab=55.76  E-value=7.9  Score=40.07  Aligned_cols=42  Identities=7%  Similarity=0.112  Sum_probs=37.9

Q ss_pred             CCCCcchHHHHHHHhhCCCcEEEEcCCCHHHHHHHH--HHcc-cc
Q 003952          673 CPIREDSAKILSELKNSSQDLAMITGDQALTACYVA--SQVH-IV  714 (784)
Q Consensus       673 d~lr~da~~~I~~L~~agi~v~MITGDn~~TA~~VA--~~~g-I~  714 (784)
                      ..+-+.+.++|++|++.|+++++.||-....+..+.  +++| +.
T Consensus        44 ~~is~~~~~al~~l~~~Gi~v~iaTGR~~~~~~~~~~~~~l~~~~   88 (301)
T 2b30_A           44 IKVPSENIDAIKEAIEKGYMVSICTGRSKVGILSAFGEENLKKMN   88 (301)
T ss_dssp             TCSCHHHHHHHHHHHHHTCEEEEECSSCHHHHHHHHCHHHHHHHT
T ss_pred             CccCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHhhHHhhcccc
Confidence            356788999999999999999999999999999999  9888 64


No 102
>2om6_A Probable phosphoserine phosphatase; rossmann fold, B-hairpin, four-helix bundle, structural GENO NPPSFA; 2.20A {Pyrococcus horikoshii}
Probab=54.38  E-value=16  Score=34.96  Aligned_cols=47  Identities=11%  Similarity=0.032  Sum_probs=39.9

Q ss_pred             CCcchHHHHHHHhhCCCcEEEEcCCC---HHHHHHHHHHcccccCCcEEE
Q 003952          675 IREDSAKILSELKNSSQDLAMITGDQ---ALTACYVASQVHIVTKPVLIL  721 (784)
Q Consensus       675 lr~da~~~I~~L~~agi~v~MITGDn---~~TA~~VA~~~gI~~~~~~il  721 (784)
                      +.+++.+.++.|++.|+++.++|+..   ...+..+.+..|+......+.
T Consensus       100 ~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~~~~l~~~~l~~~f~~~~  149 (235)
T 2om6_A          100 VLEGTKEALQFVKERGLKTAVIGNVMFWPGSYTRLLLERFGLMEFIDKTF  149 (235)
T ss_dssp             BCTTHHHHHHHHHHTTCEEEEEECCCSSCHHHHHHHHHHTTCGGGCSEEE
T ss_pred             cCccHHHHHHHHHHCCCEEEEEcCCcccchhHHHHHHHhCCcHHHhhhhe
Confidence            47999999999999999999999999   888888999999875433333


No 103
>2i33_A Acid phosphatase; HAD superfamily, hydrolase; 1.57A {Bacillus anthracis} PDB: 2i34_A
Probab=53.53  E-value=11  Score=38.26  Aligned_cols=50  Identities=16%  Similarity=0.106  Sum_probs=37.5

Q ss_pred             CCCCcchHHHHHHHhhCCCcEEEEcCCCH---HHHHHHHHHcccc--cCCcEEEe
Q 003952          673 CPIREDSAKILSELKNSSQDLAMITGDQA---LTACYVASQVHIV--TKPVLILC  722 (784)
Q Consensus       673 d~lr~da~~~I~~L~~agi~v~MITGDn~---~TA~~VA~~~gI~--~~~~~il~  722 (784)
                      .++-|++.++|+.|++.|+++.++||-..   ......-+.+|+.  .....++.
T Consensus       100 ~~~~pg~~e~L~~L~~~Gi~i~iaTnr~~~~~~~~~~~L~~~Gl~~v~~~~vi~~  154 (258)
T 2i33_A          100 AEALPGSIDFLKYTESKGVDIYYISNRKTNQLDATIKNLERVGAPQATKEHILLQ  154 (258)
T ss_dssp             CEECTTHHHHHHHHHHTTCEEEEEEEEEGGGHHHHHHHHHHHTCSSCSTTTEEEE
T ss_pred             CCcCccHHHHHHHHHHCCCEEEEEcCCchhHHHHHHHHHHHcCCCcCCCceEEEC
Confidence            46679999999999999999999999763   3344445677886  44455553


No 104
>4eek_A Beta-phosphoglucomutase-related protein; hydrolase, magnesium binding site, enzyme function initiativ; 1.60A {Deinococcus radiodurans} PDB: 4eel_A* 4een_A
Probab=53.48  E-value=9.7  Score=37.67  Aligned_cols=43  Identities=12%  Similarity=0.078  Sum_probs=39.1

Q ss_pred             CCCCcchHHHHHHHhhCCCcEEEEcCCCHHHHHHHHHHccccc
Q 003952          673 CPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVT  715 (784)
Q Consensus       673 d~lr~da~~~I~~L~~agi~v~MITGDn~~TA~~VA~~~gI~~  715 (784)
                      .++.|++.+.++.|++.|+++.++|+.....+..+.+..|+..
T Consensus       109 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~  151 (259)
T 4eek_A          109 VTAIEGAAETLRALRAAGVPFAIGSNSERGRLHLKLRVAGLTE  151 (259)
T ss_dssp             CEECTTHHHHHHHHHHHTCCEEEECSSCHHHHHHHHHHTTCHH
T ss_pred             CCcCccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHhcChHh
Confidence            3567899999999999999999999999999999999999863


No 105
>4dw8_A Haloacid dehalogenase-like hydrolase; HAD, putative phosphatase, enzyme function initiative, EFI, structural genomics; 1.50A {Bacteroides thetaiotaomicron} PDB: 3niw_A 4dwo_A
Probab=53.07  E-value=14  Score=37.12  Aligned_cols=42  Identities=12%  Similarity=0.211  Sum_probs=38.5

Q ss_pred             CCCCcchHHHHHHHhhCCCcEEEEcCCCHHHHHHHHHHcccc
Q 003952          673 CPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIV  714 (784)
Q Consensus       673 d~lr~da~~~I~~L~~agi~v~MITGDn~~TA~~VA~~~gI~  714 (784)
                      ..+-+.+.++|++|++.|+++++.||-....+..+.+++|+.
T Consensus        21 ~~i~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~   62 (279)
T 4dw8_A           21 KEISSRNRETLIRIQEQGIRLVLASGRPTYGIVPLANELRMN   62 (279)
T ss_dssp             SCCCHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTGG
T ss_pred             CccCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHhCCC
Confidence            356789999999999999999999999999999999999973


No 106
>1qyi_A ZR25, hypothetical protein; structural genomics, PSI, protein structure initiative, NORT structural genomics consortium, NESG; 2.50A {Staphylococcus aureus subsp} SCOP: c.108.1.13
Probab=53.03  E-value=9.9  Score=41.05  Aligned_cols=44  Identities=14%  Similarity=0.194  Sum_probs=40.3

Q ss_pred             CCCCcchHHHHHHHhhCCCcEEEEcCCCHHHHHHHHHHcccccC
Q 003952          673 CPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTK  716 (784)
Q Consensus       673 d~lr~da~~~I~~L~~agi~v~MITGDn~~TA~~VA~~~gI~~~  716 (784)
                      -++.|++.++++.|+++|+++.++|+-....+..+-+..|+...
T Consensus       214 ~~l~pGv~elL~~Lk~~Gi~laIvTn~~~~~~~~~L~~lgL~~~  257 (384)
T 1qyi_A          214 LRPVDEVKVLLNDLKGAGFELGIATGRPYTETVVPFENLGLLPY  257 (384)
T ss_dssp             SSCHHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCGGG
T ss_pred             CCcCcCHHHHHHHHHhCCCEEEEEeCCcHHHHHHHHHHcCChHh
Confidence            46789999999999999999999999999999999999999754


No 107
>2jmz_A Hypothetical protein MJ0781; unknown function; NMR {Methanocaldococcus jannaschii} PDB: 2jnq_A
Probab=52.72  E-value=14  Score=35.45  Aligned_cols=32  Identities=13%  Similarity=0.378  Sum_probs=27.7

Q ss_pred             CceEEEEEcCeEEEeecCCCCCCcEEEEcCCC
Q 003952          254 NQTIMVHRCGKWVKLAGTDLVPGDVVSIGRSS  285 (784)
Q Consensus       254 ~~~v~V~R~g~~~~I~s~~LvpGDiV~i~~ge  285 (784)
                      .-.+.+.++|+.+.+.+++|.|||.|.+..+.
T Consensus       102 ~Hp~~v~~~g~~~w~~A~eLk~GD~v~~~~~~  133 (186)
T 2jmz_A          102 DHPVYISKTGEVLEINAEMVKVGDYIYIPKNN  133 (186)
T ss_dssp             TCEEEEEETTEEEEEEGGGCCTTSEEEEECSS
T ss_pred             CCEEEEeCCCeEEEEEhhcCCCCCEEEecccC
Confidence            45788889999899999999999999998653


No 108
>2p11_A Hypothetical protein; putative haloacid dehalogenase-like hydrolase, structural GE joint center for structural genomics, JCSG; 2.20A {Burkholderia xenovorans}
Probab=52.27  E-value=8.4  Score=37.62  Aligned_cols=42  Identities=5%  Similarity=0.046  Sum_probs=38.3

Q ss_pred             CCCCcchHHHHHHHhhCCCcEEEEcCCCHHHHHHHHHHccccc
Q 003952          673 CPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVT  715 (784)
Q Consensus       673 d~lr~da~~~I~~L~~agi~v~MITGDn~~TA~~VA~~~gI~~  715 (784)
                      .++.|++.++++.|++.| ++.++|+-....+..+.+..|+..
T Consensus        95 ~~~~~g~~~~l~~l~~~g-~~~i~Tn~~~~~~~~~l~~~gl~~  136 (231)
T 2p11_A           95 SRVYPGALNALRHLGARG-PTVILSDGDVVFQPRKIARSGLWD  136 (231)
T ss_dssp             GGBCTTHHHHHHHHHTTS-CEEEEEECCSSHHHHHHHHTTHHH
T ss_pred             CCcCccHHHHHHHHHhCC-CEEEEeCCCHHHHHHHHHHcCcHH
Confidence            467999999999999999 999999999999999999999863


No 109
>1nf2_A Phosphatase; structural proteomics, HAD NEW fold, structural genomics, BSGC structure funded by NIH structure initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.108.1.10
Probab=49.99  E-value=15  Score=36.98  Aligned_cols=40  Identities=10%  Similarity=0.118  Sum_probs=36.3

Q ss_pred             CCCcchHHHHHHHhhCCCcEEEEcCCCHHHHHHHHHHcccc
Q 003952          674 PIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIV  714 (784)
Q Consensus       674 ~lr~da~~~I~~L~~agi~v~MITGDn~~TA~~VA~~~gI~  714 (784)
                      .+-+.+.++|++ ++.|+++++.||-....+..+.+++|+.
T Consensus        19 ~i~~~~~~al~~-~~~Gi~v~iaTGR~~~~~~~~~~~l~~~   58 (268)
T 1nf2_A           19 EISEKDRRNIEK-LSRKCYVVFASGRMLVSTLNVEKKYFKR   58 (268)
T ss_dssp             CCCHHHHHHHHH-HTTTSEEEEECSSCHHHHHHHHHHHSSS
T ss_pred             ccCHHHHHHHHH-HhCCCEEEEECCCChHHHHHHHHHhCCC
Confidence            466789999999 9999999999999999999999999873


No 110
>3ddh_A Putative haloacid dehalogenase-like family hydrol; hydrolase, HAD superfamily, ST genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides thetaiotaomicron}
Probab=49.37  E-value=16  Score=34.90  Aligned_cols=48  Identities=15%  Similarity=0.044  Sum_probs=41.3

Q ss_pred             CCCcchHHHHHHHhhCC-CcEEEEcCCCHHHHHHHHHHcccccCCcEEE
Q 003952          674 PIREDSAKILSELKNSS-QDLAMITGDQALTACYVASQVHIVTKPVLIL  721 (784)
Q Consensus       674 ~lr~da~~~I~~L~~ag-i~v~MITGDn~~TA~~VA~~~gI~~~~~~il  721 (784)
                      ++.|++.+.++.|++.| +++.++|+.....+..+.+.+|+......+.
T Consensus       105 ~~~~~~~~~l~~l~~~g~~~~~i~t~~~~~~~~~~l~~~~~~~~f~~~~  153 (234)
T 3ddh_A          105 ELLPGVKETLKTLKETGKYKLVVATKGDLLDQENKLERSGLSPYFDHIE  153 (234)
T ss_dssp             CBCTTHHHHHHHHHHHCCCEEEEEEESCHHHHHHHHHHHTCGGGCSEEE
T ss_pred             CcCccHHHHHHHHHhCCCeEEEEEeCCchHHHHHHHHHhCcHhhhheee
Confidence            56899999999999999 9999999999988899999999875444444


No 111
>3dnp_A Stress response protein YHAX; structural PSI-2, protein structure initiative, midwest center for STR genomics, MCSG, unknown function; HET: MSE; 1.85A {Bacillus subtilis} SCOP: c.108.1.0
Probab=48.29  E-value=17  Score=36.75  Aligned_cols=41  Identities=12%  Similarity=0.191  Sum_probs=38.0

Q ss_pred             CCCcchHHHHHHHhhCCCcEEEEcCCCHHHHHHHHHHcccc
Q 003952          674 PIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIV  714 (784)
Q Consensus       674 ~lr~da~~~I~~L~~agi~v~MITGDn~~TA~~VA~~~gI~  714 (784)
                      .+-+.+.++|++|++.|+++++.||-....+..+.+++|+.
T Consensus        23 ~i~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~~~~~   63 (290)
T 3dnp_A           23 KIHQATKDAIEYVKKKGIYVTLVTNRHFRSAQKIAKSLKLD   63 (290)
T ss_dssp             CCCHHHHHHHHHHHHTTCEEEEBCSSCHHHHHHHHHHTTCC
T ss_pred             ccCHHHHHHHHHHHHCCCEEEEECCCChHHHHHHHHHcCCC
Confidence            56788999999999999999999999999999999999874


No 112
>1nrw_A Hypothetical protein, haloacid dehalogenase-like hydrolase; structural genomics, PSI, protein structure initiative; 1.70A {Bacillus subtilis} SCOP: c.108.1.10
Probab=47.75  E-value=16  Score=37.17  Aligned_cols=42  Identities=10%  Similarity=0.179  Sum_probs=37.3

Q ss_pred             CCCCcchHHHHHHHhhCCCcEEEEcCCCHHHHHHHHHHcccc
Q 003952          673 CPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIV  714 (784)
Q Consensus       673 d~lr~da~~~I~~L~~agi~v~MITGDn~~TA~~VA~~~gI~  714 (784)
                      ..+.+.+.++|+.|++.|+++++.||-+...+..+.+++|+.
T Consensus        20 ~~i~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~   61 (288)
T 1nrw_A           20 HQVSLENENALRQAQRDGIEVVVSTGRAHFDVMSIFEPLGIK   61 (288)
T ss_dssp             SCCCHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHGGGTCC
T ss_pred             CccCHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCC
Confidence            346788899999999999999999999999999999988763


No 113
>3mpo_A Predicted hydrolase of the HAD superfamily; SGX, PSI, structural genomics, protein structure initiative; 2.90A {Lactobacillus brevis} SCOP: c.108.1.0
Probab=47.22  E-value=17  Score=36.48  Aligned_cols=42  Identities=10%  Similarity=0.073  Sum_probs=37.0

Q ss_pred             CCCCcchHHHHHHHhhCCCcEEEEcCCCHHHHHHHHHHcccc
Q 003952          673 CPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIV  714 (784)
Q Consensus       673 d~lr~da~~~I~~L~~agi~v~MITGDn~~TA~~VA~~~gI~  714 (784)
                      ..+-+.+.++|++|++.|+++++.||-....+..+.+++|+.
T Consensus        21 ~~i~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~   62 (279)
T 3mpo_A           21 NELAQATIDAVQAAKAQGIKVVLCTGRPLTGVQPYLDAMDID   62 (279)
T ss_dssp             ---CHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCC
T ss_pred             CcCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCC
Confidence            356788999999999999999999999999999999999874


No 114
>2pr7_A Haloacid dehalogenase/epoxide hydrolase family; NP_599989.1, uncharacterized protein, structural genomics; 1.44A {Corynebacterium glutamicum atcc 13032}
Probab=46.98  E-value=87  Score=26.77  Aligned_cols=87  Identities=10%  Similarity=0.057  Sum_probs=48.8

Q ss_pred             hHHHHHHHHhhccCeEEEEEEEeCCCCChhhHhhhhhhhccCCcEEEEEEeec--CCCCcchHHHHHHHhhCCC---cEE
Q 003952          620 SYIETYKKYTHQGSRVLALAFKSLPDMTVSDARSLHRDEVENGLTFAGFAVFN--CPIREDSAKILSELKNSSQ---DLA  694 (784)
Q Consensus       620 ~~~~~~~~~~~~G~Rvlala~k~l~~~~~~~~~~~~r~~~E~~l~flG~l~~~--d~lr~da~~~I~~L~~agi---~v~  694 (784)
                      ...+.++.+.++|+++..+.-+...  ....  .+.+-.+..-  |-.++.-.  ..-||+..-.-+.+++.|+   +++
T Consensus        22 ~~~~~l~~L~~~G~~~~i~S~~~~~--~~~~--~l~~~~l~~~--f~~i~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~~   95 (137)
T 2pr7_A           22 RWRNLLAAAKKNGVGTVILSNDPGG--LGAA--PIRELETNGV--VDKVLLSGELGVEKPEEAAFQAAADAIDLPMRDCV   95 (137)
T ss_dssp             HHHHHHHHHHHTTCEEEEEECSCCG--GGGH--HHHHHHHTTS--SSEEEEHHHHSCCTTSHHHHHHHHHHTTCCGGGEE
T ss_pred             cHHHHHHHHHHCCCEEEEEeCCCHH--HHHH--HHHHCChHhh--ccEEEEeccCCCCCCCHHHHHHHHHHcCCCcccEE
Confidence            4556778888899998777633211  0010  0111111111  11222111  2346665555556677777   477


Q ss_pred             EEcCCCHHHHHHHHHHcccc
Q 003952          695 MITGDQALTACYVASQVHIV  714 (784)
Q Consensus       695 MITGDn~~TA~~VA~~~gI~  714 (784)
                      || ||++. -+..|+++|+.
T Consensus        96 ~v-gD~~~-di~~a~~~G~~  113 (137)
T 2pr7_A           96 LV-DDSIL-NVRGAVEAGLV  113 (137)
T ss_dssp             EE-ESCHH-HHHHHHHHTCE
T ss_pred             EE-cCCHH-HHHHHHHCCCE
Confidence            76 99986 69999999984


No 115
>4as2_A Phosphorylcholine phosphatase; hydrolase, HAD superfamily, alkylammonium compounds; HET: BTB; 2.12A {Pseudomonas aeruginosa} PDB: 4as3_A*
Probab=46.57  E-value=7.8  Score=40.89  Aligned_cols=39  Identities=10%  Similarity=0.132  Sum_probs=36.5

Q ss_pred             CCCCcchHHHHHHHhhCCCcEEEEcCCCHHHHHHHHHHc
Q 003952          673 CPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQV  711 (784)
Q Consensus       673 d~lr~da~~~I~~L~~agi~v~MITGDn~~TA~~VA~~~  711 (784)
                      -.+.|++.+.++.|++.|++|++|||=+......+|..+
T Consensus       142 ~~~~~~~~~l~~~l~~~G~~v~ivSas~~~~v~~~a~~~  180 (327)
T 4as2_A          142 PRVFSGQRELYNKLMENGIEVYVISAAHEELVRMVAADP  180 (327)
T ss_dssp             CEECHHHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHTCG
T ss_pred             cccCHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHhhc
Confidence            356899999999999999999999999999999999986


No 116
>3dao_A Putative phosphatse; structural genomics, joint center for S genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE 1PE CIT; 1.80A {Eubacterium rectale}
Probab=44.76  E-value=17  Score=36.91  Aligned_cols=41  Identities=10%  Similarity=0.118  Sum_probs=37.5

Q ss_pred             CCCcchHHHHHHHhhCCCcEEEEcCCCHHHHHHHHHHcccc
Q 003952          674 PIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIV  714 (784)
Q Consensus       674 ~lr~da~~~I~~L~~agi~v~MITGDn~~TA~~VA~~~gI~  714 (784)
                      .+-+.+.++|++|++.|+++++.||-....+..+.+++|+.
T Consensus        39 ~i~~~~~~al~~l~~~G~~v~iaTGR~~~~~~~~~~~l~~~   79 (283)
T 3dao_A           39 LIDPEYMSVIDRLIDKGIIFVVCSGRQFSSEFKLFAPIKHK   79 (283)
T ss_dssp             CCCHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHTGGGGGG
T ss_pred             cCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCC
Confidence            56789999999999999999999999999999999888753


No 117
>2oda_A Hypothetical protein pspto_2114; haloacid dehalogenase, phosphonoacetaldehyde hydrolase, protein binding; HET: EPE; 1.90A {Pseudomonas syringae PV}
Probab=44.31  E-value=15  Score=35.15  Aligned_cols=37  Identities=14%  Similarity=0.133  Sum_probs=31.3

Q ss_pred             CCCCcchHHHHHHHhhCCCcEEEEcCCCHHHHHHHHH
Q 003952          673 CPIREDSAKILSELKNSSQDLAMITGDQALTACYVAS  709 (784)
Q Consensus       673 d~lr~da~~~I~~L~~agi~v~MITGDn~~TA~~VA~  709 (784)
                      .++.|++.++++.|++.|+++.++||-....+..+++
T Consensus        35 ~~~~pg~~e~L~~L~~~g~~~~i~T~~~~~~~~~~~~   71 (196)
T 2oda_A           35 AQLTPGAQNALKALRDQGMPCAWIDELPEALSTPLAA   71 (196)
T ss_dssp             GSBCTTHHHHHHHHHHHTCCEEEECCSCHHHHHHHHT
T ss_pred             CCcCcCHHHHHHHHHHCCCEEEEEcCChHHHHHHhcC
Confidence            3678999999999999999999999988877754443


No 118
>3kc2_A Uncharacterized protein YKR070W; HAD-like, mitochondral protein, PSI, MCSG, structural genomi protein structure initiative; HET: MSE; 1.55A {Saccharomyces cerevisiae} PDB: 3rf6_A*
Probab=43.63  E-value=13  Score=39.61  Aligned_cols=51  Identities=12%  Similarity=0.186  Sum_probs=37.8

Q ss_pred             ecCCCCcchHHHHHHHhhCCCcEEEEcCCC----HHHHHHHHHHcccccCCcEEE
Q 003952          671 FNCPIREDSAKILSELKNSSQDLAMITGDQ----ALTACYVASQVHIVTKPVLIL  721 (784)
Q Consensus       671 ~~d~lr~da~~~I~~L~~agi~v~MITGDn----~~TA~~VA~~~gI~~~~~~il  721 (784)
                      -.+.+=|++.++|+.|++.|++++.+|+-.    ...+...++.+||.-....++
T Consensus        26 ~g~~~~p~a~~~l~~l~~~g~~~~~vTNn~~~~~~~~~~~l~~~lgi~~~~~~i~   80 (352)
T 3kc2_A           26 RGKKPIAGASDALKLLNRNKIPYILLTNGGGFSERARTEFISSKLDVDVSPLQII   80 (352)
T ss_dssp             ETTEECTTHHHHHHHHHHTTCCEEEECSCCSSCHHHHHHHHHHHHTSCCCGGGEE
T ss_pred             cCCeeCcCHHHHHHHHHHCCCEEEEEeCCCCCCchHHHHHHHHhcCCCCChhhEe
Confidence            344556899999999999999999999876    345556666788864334444


No 119
>2gfh_A Haloacid dehalogenase-like hydrolase domain conta; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.90A {Mus musculus} SCOP: c.108.1.6 PDB: 2w4m_A
Probab=43.49  E-value=26  Score=34.92  Aligned_cols=47  Identities=17%  Similarity=0.155  Sum_probs=40.3

Q ss_pred             CCCcchHHHHHHHhhCCCcEEEEcCCCHHHHHHHHHHcccccCCcEEE
Q 003952          674 PIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLIL  721 (784)
Q Consensus       674 ~lr~da~~~I~~L~~agi~v~MITGDn~~TA~~VA~~~gI~~~~~~il  721 (784)
                      ++.|++.++++.|++ ++++.++|+.....+..+.+.+|+......+.
T Consensus       121 ~~~~g~~~~L~~L~~-~~~l~i~Tn~~~~~~~~~l~~~gl~~~f~~i~  167 (260)
T 2gfh_A          121 ILADDVKAMLTELRK-EVRLLLLTNGDRQTQREKIEACACQSYFDAIV  167 (260)
T ss_dssp             CCCHHHHHHHHHHHT-TSEEEEEECSCHHHHHHHHHHHTCGGGCSEEE
T ss_pred             CCCcCHHHHHHHHHc-CCcEEEEECcChHHHHHHHHhcCHHhhhheEE
Confidence            678999999999998 59999999999999999999999975544443


No 120
>1xpj_A Hypothetical protein; structural genomics, MCSG, protein STR initiative, PSI, midwest center for structural genomics, UN function; HET: TLA; 2.30A {Vibrio cholerae} SCOP: c.108.1.18
Probab=42.31  E-value=14  Score=32.65  Aligned_cols=29  Identities=17%  Similarity=0.122  Sum_probs=25.7

Q ss_pred             CCCcchHHHHHHHhhCCCcEEEEcCCCHH
Q 003952          674 PIREDSAKILSELKNSSQDLAMITGDQAL  702 (784)
Q Consensus       674 ~lr~da~~~I~~L~~agi~v~MITGDn~~  702 (784)
                      ++.+++.++|+.|++.|+++++.||-...
T Consensus        24 ~~~~~~~~~l~~l~~~Gi~~~iaTGR~~~   52 (126)
T 1xpj_A           24 LPRLDVIEQLREYHQLGFEIVISTARNMR   52 (126)
T ss_dssp             CBCHHHHHHHHHHHHTTCEEEEEECTTTT
T ss_pred             CCCHHHHHHHHHHHhCCCeEEEEeCCChh
Confidence            46688999999999999999999998753


No 121
>3n28_A Phosphoserine phosphatase; HAD family hydrolase, structural genomics, PSI, protein STRU initiative, nysgrc; 2.30A {Vibrio cholerae}
Probab=42.23  E-value=20  Score=37.34  Aligned_cols=49  Identities=8%  Similarity=0.127  Sum_probs=41.3

Q ss_pred             EEEeecCCCCcchHHHHHHHh-hC----------CCcEEEEcCCCHHHHHHHHHHccccc
Q 003952          667 GFAVFNCPIREDSAKILSELK-NS----------SQDLAMITGDQALTACYVASQVHIVT  715 (784)
Q Consensus       667 G~l~~~d~lr~da~~~I~~L~-~a----------gi~v~MITGDn~~TA~~VA~~~gI~~  715 (784)
                      |++.+..++-++..+++.++. ..          |+.++++||+.......++++.|+..
T Consensus        36 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~atGr~~~~l~~~~~~~gld~   95 (335)
T 3n28_A           36 SWIVFGHYLTPAQFEDMDFFTNRFNAILDMWKVGRYEVALMDGELTSEHETILKALELDY   95 (335)
T ss_dssp             CEEEEESCCCHHHHHHHHHHHTSCCCEEEEEEETTEEEEEESSCCCHHHHHHHHHHTCEE
T ss_pred             eEEEECCCCCHHHHHHHHHHhcccccchheeecccceEEEecCCchHHHHHHHHHcCCCE
Confidence            455677888888889998887 33          79999999999999999999999863


No 122
>1vjr_A 4-nitrophenylphosphatase; TM1742, structural genomics, JCSG, protein structure initiative, joint center for structural G hydrolase; 2.40A {Thermotoga maritima} SCOP: c.108.1.14 PDB: 1pw5_A*
Probab=42.17  E-value=13  Score=37.21  Aligned_cols=42  Identities=14%  Similarity=0.101  Sum_probs=36.5

Q ss_pred             CCCCcchHHHHHHHhhCCCcEEEEc---CCCHHHHHHHHHHcccc
Q 003952          673 CPIREDSAKILSELKNSSQDLAMIT---GDQALTACYVASQVHIV  714 (784)
Q Consensus       673 d~lr~da~~~I~~L~~agi~v~MIT---GDn~~TA~~VA~~~gI~  714 (784)
                      .++-+++.++|+.|++.|++++++|   |-.........+++|+.
T Consensus        32 ~~~~~~~~~~l~~l~~~G~~~~~aTn~~gr~~~~~~~~~~~lg~~   76 (271)
T 1vjr_A           32 DSLLPGSLEFLETLKEKNKRFVFFTNNSSLGAQDYVRKLRNMGVD   76 (271)
T ss_dssp             TEECTTHHHHHHHHHHTTCEEEEEESCTTSCHHHHHHHHHHTTCC
T ss_pred             CEECcCHHHHHHHHHHcCCeEEEEECCCCCCHHHHHHHHHHcCCC
Confidence            5566889999999999999999999   88888888888888874


No 123
>1q92_A 5(3)-deoxyribonucleotidase; alpha-beta rossman fold, hydrolase; HET: DRM; 1.40A {Homo sapiens} SCOP: c.108.1.8 PDB: 1mh9_A* 1q91_A* 1z4m_A* 1z4i_A* 1z4j_A* 1z4l_A* 1z4k_A* 1z4p_X* 1z4q_A* 2jau_A* 2jaw_A* 3u19_A* 3u13_A 4e88_A
Probab=41.85  E-value=7.2  Score=37.28  Aligned_cols=42  Identities=10%  Similarity=0.035  Sum_probs=34.0

Q ss_pred             CCCCcchHHHHHHHhhC-CCcEEEEcCCCHHHHHHHHHHcccc
Q 003952          673 CPIREDSAKILSELKNS-SQDLAMITGDQALTACYVASQVHIV  714 (784)
Q Consensus       673 d~lr~da~~~I~~L~~a-gi~v~MITGDn~~TA~~VA~~~gI~  714 (784)
                      -++.|++.++++.|++. |+++.++|+-....+..+-+..|+.
T Consensus        74 ~~~~~g~~e~L~~L~~~~g~~~~ivT~~~~~~~~~~l~~~~l~  116 (197)
T 1q92_A           74 LEPLPGAVEAVKEMASLQNTDVFICTSPIKMFKYCPYEKYAWV  116 (197)
T ss_dssp             CCBCTTHHHHHHHHHHSTTEEEEEEECCCSCCSSHHHHHHHHH
T ss_pred             CCcCcCHHHHHHHHHhcCCCeEEEEeCCccchHHHHHHHhchH
Confidence            46789999999999999 9999999997766655555555554


No 124
>1swv_A Phosphonoacetaldehyde hydrolase; HAD enzyme superfamily, phosphonotase, metal binding; 2.30A {Bacillus cereus} SCOP: c.108.1.3 PDB: 1sww_A 2iof_A* 2ioh_A 1rql_A 1rqn_A 2iof_K* 1rdf_A 1fez_A
Probab=40.98  E-value=22  Score=35.04  Aligned_cols=42  Identities=12%  Similarity=0.128  Sum_probs=37.9

Q ss_pred             CCCcchHHHHHHHhhCCCcEEEEcCCCHHHHHHHHHHccccc
Q 003952          674 PIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVT  715 (784)
Q Consensus       674 ~lr~da~~~I~~L~~agi~v~MITGDn~~TA~~VA~~~gI~~  715 (784)
                      ++.+++.+.++.|++.|+++.++|++....+..+.+.+|+..
T Consensus       103 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~~~~  144 (267)
T 1swv_A          103 SPINGVKEVIASLRERGIKIGSTTGYTREMMDIVAKEAALQG  144 (267)
T ss_dssp             CBCTTHHHHHHHHHHTTCEEEEBCSSCHHHHHHHHHHHHHTT
T ss_pred             ccCccHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHcCCcc
Confidence            467999999999999999999999999999898988888764


No 125
>2lcj_A PAB POLC intein; hydrolase; NMR {Pyrococcus abyssi}
Probab=40.58  E-value=30  Score=32.98  Aligned_cols=33  Identities=15%  Similarity=0.348  Sum_probs=28.5

Q ss_pred             CCceEEEEEcCeEEEeecCCCCCCcEEEEcCCC
Q 003952          253 DNQTIMVHRCGKWVKLAGTDLVPGDVVSIGRSS  285 (784)
Q Consensus       253 ~~~~v~V~R~g~~~~I~s~~LvpGDiV~i~~ge  285 (784)
                      ....+.+.++|+...+.+++|.|||.|.+.+++
T Consensus        91 ~~H~~~v~~~g~~~~~~A~eLk~GD~v~v~~~~  123 (185)
T 2lcj_A           91 VDHPVLVYENGRFIEKRAFEVKEGDKVLVSELE  123 (185)
T ss_dssp             SSSEEEEEETTEEEEEEGGGCCTTCEEEECCCC
T ss_pred             CCCEEEEecCCeEEEEEHHHCCCCCEEEEcccc
Confidence            346788999999999999999999999998754


No 126
>1yns_A E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo sapiens} SCOP: c.108.1.22 PDB: 1zs9_A
Probab=40.55  E-value=37  Score=33.95  Aligned_cols=49  Identities=4%  Similarity=0.004  Sum_probs=38.8

Q ss_pred             CCCCcchHHHHHHHhhCCCcEEEEcCCCHHHHHHHHHHc---ccccCCcEEE
Q 003952          673 CPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQV---HIVTKPVLIL  721 (784)
Q Consensus       673 d~lr~da~~~I~~L~~agi~v~MITGDn~~TA~~VA~~~---gI~~~~~~il  721 (784)
                      .++.|++.++++.|+++|+++.++|.-+...+..+-+..   |+......+.
T Consensus       129 ~~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~~~~~~~l~~~fd~i~  180 (261)
T 1yns_A          129 AEFFADVVPAVRKWREAGMKVYIYSSGSVEAQKLLFGHSTEGDILELVDGHF  180 (261)
T ss_dssp             BCCCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHTBTTBCCGGGCSEEE
T ss_pred             cccCcCHHHHHHHHHhCCCeEEEEeCCCHHHHHHHHHhhcccChHhhccEEE
Confidence            478999999999999999999999999888777776644   4654433443


No 127
>2pke_A Haloacid delahogenase-like family hydrolase; NP_639141.1, ST genomics, joint center for structural genomics, JCSG; 1.81A {Xanthomonas campestris PV}
Probab=40.33  E-value=32  Score=33.60  Aligned_cols=46  Identities=9%  Similarity=0.036  Sum_probs=39.3

Q ss_pred             CCCcchHHHHHHHhhCCCcEEEEcCCCHHHHHHHHHHcccccCCcEE
Q 003952          674 PIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLI  720 (784)
Q Consensus       674 ~lr~da~~~I~~L~~agi~v~MITGDn~~TA~~VA~~~gI~~~~~~i  720 (784)
                      ++.|++.++++.|+ .|+++.++|+.....+....+..|+......+
T Consensus       112 ~~~~~~~~~l~~l~-~~~~~~i~t~~~~~~~~~~l~~~~l~~~f~~i  157 (251)
T 2pke_A          112 EVIAGVREAVAAIA-ADYAVVLITKGDLFHQEQKIEQSGLSDLFPRI  157 (251)
T ss_dssp             CBCTTHHHHHHHHH-TTSEEEEEEESCHHHHHHHHHHHSGGGTCCCE
T ss_pred             CcCccHHHHHHHHH-CCCEEEEEeCCCHHHHHHHHHHcCcHHhCcee
Confidence            56899999999999 99999999999998899999999987543333


No 128
>1y8a_A Hypothetical protein AF1437; structural genomics, protein structu initiative, PSI, midwest center for structural genomics; 1.40A {Archaeoglobus fulgidus} SCOP: c.108.1.24
Probab=40.21  E-value=18  Score=37.73  Aligned_cols=40  Identities=15%  Similarity=0.121  Sum_probs=35.4

Q ss_pred             CCCcchHHHHHHHhhCCCcEEEEcCCCHHHHHHHHHHcccc
Q 003952          674 PIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIV  714 (784)
Q Consensus       674 ~lr~da~~~I~~L~~agi~v~MITGDn~~TA~~VA~~~gI~  714 (784)
                      ++++++.++++.|++ |+.+.++|||+...+..+++.+++.
T Consensus       103 ~~~~~~~~~l~~l~~-g~~~~i~t~~~~~~~~~~~~~~~~~  142 (332)
T 1y8a_A          103 KFVPDAEKAMATLQE-RWTPVVISTSYTQYLRRTASMIGVR  142 (332)
T ss_dssp             CBCTTHHHHHHHHHT-TCEEEEEEEEEHHHHHHHHHHTTCC
T ss_pred             CCHHHHHHHHHHHHc-CCcEEEEECCceEEEcccchhhhhh
Confidence            569999999999999 9999999999977777888888774


No 129
>2i6x_A Hydrolase, haloacid dehalogenase-like family; HAD superfamily, struct genomics, PSI-2, protein structure initiative; HET: MSE; 2.40A {Porphyromonas gingivalis}
Probab=40.16  E-value=16  Score=34.55  Aligned_cols=46  Identities=9%  Similarity=0.065  Sum_probs=37.5

Q ss_pred             CCCcchHHHHHHHhhCCCcEEEEcCCCHHHHHHHHHH------cccccCCcEE
Q 003952          674 PIREDSAKILSELKNSSQDLAMITGDQALTACYVASQ------VHIVTKPVLI  720 (784)
Q Consensus       674 ~lr~da~~~I~~L~~agi~v~MITGDn~~TA~~VA~~------~gI~~~~~~i  720 (784)
                      ++.|++.+.++.|++ |+++.++|+.....+..+.+.      .|+......+
T Consensus        89 ~~~~~~~~~l~~l~~-g~~~~i~t~~~~~~~~~~~~~l~~~~~~~l~~~f~~~  140 (211)
T 2i6x_A           89 EISAEKFDYIDSLRP-DYRLFLLSNTNPYVLDLAMSPRFLPSGRTLDSFFDKV  140 (211)
T ss_dssp             EECHHHHHHHHHHTT-TSEEEEEECCCHHHHHHHTSTTSSTTCCCGGGGSSEE
T ss_pred             ccChHHHHHHHHHHc-CCeEEEEeCCCHHHHHHHHhhhccccccCHHHHcCeE
Confidence            457999999999999 999999999988888888777      6876433333


No 130
>3kbb_A Phosphorylated carbohydrates phosphatase TM_1254; hydrolase, arbohydrate metabolism, COBA magnesium, manganese, metal-binding, nickel; HET: MSE GOL; 1.74A {Thermotoga maritima MSB8}
Probab=37.08  E-value=65  Score=30.37  Aligned_cols=86  Identities=14%  Similarity=0.075  Sum_probs=50.9

Q ss_pred             hHHHHHHHHhhccCeEEEEEEEeCCCCChhhHh-hhhhhhccCCcEEEEEEeec--CCCCcchHHHHHHHhhCCC---cE
Q 003952          620 SYIETYKKYTHQGSRVLALAFKSLPDMTVSDAR-SLHRDEVENGLTFAGFAVFN--CPIREDSAKILSELKNSSQ---DL  693 (784)
Q Consensus       620 ~~~~~~~~~~~~G~Rvlala~k~l~~~~~~~~~-~~~r~~~E~~l~flG~l~~~--d~lr~da~~~I~~L~~agi---~v  693 (784)
                      ...+.++.+.++|+++..+.-     ....... .+.+-.+..-  |-..+.-+  ...||+..-....+++.|+   ++
T Consensus        88 g~~~~l~~L~~~g~~~~i~tn-----~~~~~~~~~l~~~~l~~~--fd~~~~~~~~~~~KP~p~~~~~a~~~lg~~p~e~  160 (216)
T 3kbb_A           88 GVREALEFVKSKRIKLALATS-----TPQREALERLRRLDLEKY--FDVMVFGDQVKNGKPDPEIYLLVLERLNVVPEKV  160 (216)
T ss_dssp             THHHHHHHHHHTTCEEEEECS-----SCHHHHHHHHHHTTCGGG--CSEEECGGGSSSCTTSTHHHHHHHHHHTCCGGGE
T ss_pred             cHHHHHHHHHHcCCCcccccC-----CcHHHHHHHHHhcCCCcc--ccccccccccCCCcccHHHHHHHHHhhCCCccce
Confidence            456677888899988765541     1111111 1111112111  22222222  2457777767777777787   57


Q ss_pred             EEEcCCCHHHHHHHHHHcccc
Q 003952          694 AMITGDQALTACYVASQVHIV  714 (784)
Q Consensus       694 ~MITGDn~~TA~~VA~~~gI~  714 (784)
                      +|| ||++ +-+.-|+++||.
T Consensus       161 l~V-gDs~-~Di~aA~~aG~~  179 (216)
T 3kbb_A          161 VVF-EDSK-SGVEAAKSAGIE  179 (216)
T ss_dssp             EEE-ECSH-HHHHHHHHTTCC
T ss_pred             EEE-ecCH-HHHHHHHHcCCc
Confidence            777 8996 789999999995


No 131
>3u26_A PF00702 domain protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, unknown function; 1.59A {Pyrococcus horikoshii} SCOP: c.108.1.1 PDB: 1x42_A
Probab=35.18  E-value=48  Score=31.55  Aligned_cols=47  Identities=19%  Similarity=0.159  Sum_probs=40.4

Q ss_pred             CCCcchHHHHHHHhhCCCcEEEEcCCCHHHHHHHHHHcccccCCcEEE
Q 003952          674 PIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLIL  721 (784)
Q Consensus       674 ~lr~da~~~I~~L~~agi~v~MITGDn~~TA~~VA~~~gI~~~~~~il  721 (784)
                      ++.|++.+.++.|++. +++.++|+.....+..+.+..|+......+.
T Consensus       100 ~~~~~~~~~l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~~~~~f~~~~  146 (234)
T 3u26_A          100 ELYPEVVEVLKSLKGK-YHVGMITDSDTEQAMAFLDALGIKDLFDSIT  146 (234)
T ss_dssp             CBCTTHHHHHHHHTTT-SEEEEEESSCHHHHHHHHHHTTCGGGCSEEE
T ss_pred             CcCcCHHHHHHHHHhC-CcEEEEECCCHHHHHHHHHHcCcHHHcceeE
Confidence            5679999999999999 9999999999999999999999875444443


No 132
>1at0_A 17-hedgehog; developmental signaling molecule, cholesterol transfer, signaling protein; 1.90A {Drosophila melanogaster} SCOP: b.86.1.1
Probab=35.04  E-value=95  Score=28.15  Aligned_cols=31  Identities=10%  Similarity=0.027  Sum_probs=24.8

Q ss_pred             CceEEEEEc--CeEEEeecCCCCCCcEEEEcCC
Q 003952          254 NQTIMVHRC--GKWVKLAGTDLVPGDVVSIGRS  284 (784)
Q Consensus       254 ~~~v~V~R~--g~~~~I~s~~LvpGDiV~i~~g  284 (784)
                      ...+.+..+  ++...+.+++|+|||.|.+..|
T Consensus        71 ~H~i~v~~~~~~~~~~v~A~~l~~GD~v~~~~~  103 (145)
T 1at0_A           71 AHLVSVWQPESQKLTFVFADRIEEKNQVLVRDV  103 (145)
T ss_dssp             TCEEEEEETTTTEEEEEEGGGCCTTCEEEEECT
T ss_pred             CCEEEEecCCCCcEEEEEHHHCcCCCEEEEecC
Confidence            345667765  4578899999999999999866


No 133
>3f9r_A Phosphomannomutase; trypanosome glycobiology structural genomics, isomerase, structural genomics consortium, SGC; 1.85A {Trypanosoma brucei} SCOP: c.108.1.0 PDB: 2i54_A* 2i55_A*
Probab=34.08  E-value=34  Score=34.01  Aligned_cols=37  Identities=5%  Similarity=0.086  Sum_probs=31.7

Q ss_pred             CCCcchHHHHHHHhhCCCcEEEEcCCCHHHHHHHHHHccc
Q 003952          674 PIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHI  713 (784)
Q Consensus       674 ~lr~da~~~I~~L~~agi~v~MITGDn~~TA~~VA~~~gI  713 (784)
                      .+-+++.++|++|++.|+++++.||-....   +.+.++.
T Consensus        21 ~i~~~~~~~l~~l~~~g~~~~iaTGR~~~~---~~~~l~~   57 (246)
T 3f9r_A           21 CQTDEMRALIKRARGAGFCVGTVGGSDFAK---QVEQLGR   57 (246)
T ss_dssp             CCCHHHHHHHHHHHHTTCEEEEECSSCHHH---HHHHHCT
T ss_pred             ccCHHHHHHHHHHHHCCCEEEEECCCCHHH---HHHHhhh
Confidence            577899999999999999999999998874   5666663


No 134
>3k1z_A Haloacid dehalogenase-like hydrolase domain-conta protein 3; HDHD3, haloacid dehalogenase-like hydrolase domain containin structural genomics; 1.55A {Homo sapiens}
Probab=33.55  E-value=31  Score=34.18  Aligned_cols=46  Identities=11%  Similarity=0.094  Sum_probs=37.3

Q ss_pred             CCCcchHHHHHHHhhCCCcEEEEcCCCHHHHHHHHHHcccccCCcEE
Q 003952          674 PIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLI  720 (784)
Q Consensus       674 ~lr~da~~~I~~L~~agi~v~MITGDn~~TA~~VA~~~gI~~~~~~i  720 (784)
                      ++.|++.++++.|++.|+++.++|+.... +..+-+.+|+......+
T Consensus       106 ~~~~~~~~~l~~l~~~g~~~~i~tn~~~~-~~~~l~~~gl~~~f~~~  151 (263)
T 3k1z_A          106 QVLDGAEDTLRECRTRGLRLAVISNFDRR-LEGILGGLGLREHFDFV  151 (263)
T ss_dssp             EECTTHHHHHHHHHHTTCEEEEEESCCTT-HHHHHHHTTCGGGCSCE
T ss_pred             eECcCHHHHHHHHHhCCCcEEEEeCCcHH-HHHHHHhCCcHHhhhEE
Confidence            35799999999999999999999987664 57888889986543333


No 135
>2b0c_A Putative phosphatase; alpha-D-glucose-1-phosphate, structural genomic protein structure initiative, midwest center for structural genomics, MCSG; HET: G1P; 2.00A {Escherichia coli} SCOP: c.108.1.2
Probab=33.10  E-value=5.1  Score=38.01  Aligned_cols=42  Identities=12%  Similarity=0.336  Sum_probs=33.2

Q ss_pred             CCCcchHHHHHHHhhCCCcEEEEcCCCHHHHHHHHHH-ccccc
Q 003952          674 PIREDSAKILSELKNSSQDLAMITGDQALTACYVASQ-VHIVT  715 (784)
Q Consensus       674 ~lr~da~~~I~~L~~agi~v~MITGDn~~TA~~VA~~-~gI~~  715 (784)
                      ++.|++.+.++.|++.|+++.++|+.....+..+.+. .|+..
T Consensus        91 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~~~~~~~l~~  133 (206)
T 2b0c_A           91 ALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEIRD  133 (206)
T ss_dssp             EECHHHHHHHHHHHHTTCEEEEEECCCCCTTSCCGGGCHHHHH
T ss_pred             ccCccHHHHHHHHHHCCCeEEEEECCChHHHHHHHHhccChhh
Confidence            4679999999999999999999999776665555554 56543


No 136
>1zjj_A Hypothetical protein PH1952; alpha/beta hydrolase fold, HAD superfamily, structural genom riken structural genomics/proteomics initiative; 1.85A {Pyrococcus horikoshii}
Probab=32.51  E-value=20  Score=35.77  Aligned_cols=38  Identities=16%  Similarity=0.180  Sum_probs=32.9

Q ss_pred             cchHHHHHHHhhCCCcEEEEcCCCHHHHHHHHHH---cccc
Q 003952          677 EDSAKILSELKNSSQDLAMITGDQALTACYVASQ---VHIV  714 (784)
Q Consensus       677 ~da~~~I~~L~~agi~v~MITGDn~~TA~~VA~~---~gI~  714 (784)
                      +++.++|+.|++.|++++++||-...+...++++   +|+.
T Consensus        20 ~~~~~~l~~l~~~g~~~~~~T~r~~~~~~~~~~~l~~lg~~   60 (263)
T 1zjj_A           20 PGVRELIEFLKERGIPFAFLTNNSTKTPEMYREKLLKMGID   60 (263)
T ss_dssp             TTHHHHHHHHHHHTCCEEEEESCCSSCHHHHHHHHHTTTCC
T ss_pred             ccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHCCCC
Confidence            7899999999999999999999988777777776   4664


No 137
>4gib_A Beta-phosphoglucomutase; rossmann fold, HAD-like, structural genomics, center for structural genomics of infectious DISE csgid, isomerase; 2.27A {Clostridium difficile}
Probab=31.53  E-value=65  Score=31.58  Aligned_cols=47  Identities=17%  Similarity=0.207  Sum_probs=36.9

Q ss_pred             CCCCcchHHHHHHHhhCCCcEEEEcCCCHHHHHHHHHHcccccCCcEEE
Q 003952          673 CPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLIL  721 (784)
Q Consensus       673 d~lr~da~~~I~~L~~agi~v~MITGDn~~TA~~VA~~~gI~~~~~~il  721 (784)
                      .++.|++.+.++.|++.|+++.+.|+-.  .+..+-+.+|+.+....+.
T Consensus       115 ~~~~p~~~~ll~~Lk~~g~~i~i~~~~~--~~~~~L~~~gl~~~Fd~i~  161 (250)
T 4gib_A          115 NDILPGIESLLIDVKSNNIKIGLSSASK--NAINVLNHLGISDKFDFIA  161 (250)
T ss_dssp             GGSCTTHHHHHHHHHHTTCEEEECCSCT--THHHHHHHHTCGGGCSEEC
T ss_pred             cccchhHHHHHHHHHhcccccccccccc--hhhhHhhhcccccccceee
Confidence            4578999999999999999988776543  4667788899986655555


No 138
>1ltq_A Polynucleotide kinase; phosphatase, alpha/beta, P-loop, transferase; HET: ADP; 2.33A {Enterobacteria phage T4} SCOP: c.108.1.9 c.37.1.1 PDB: 1rc8_A* 1rpz_A* 1rrc_A* 2ia5_A
Probab=30.85  E-value=25  Score=35.89  Aligned_cols=34  Identities=9%  Similarity=0.022  Sum_probs=29.6

Q ss_pred             eecCCCCcchHHHHHHHhhCCCcEEEEcCCCHHH
Q 003952          670 VFNCPIREDSAKILSELKNSSQDLAMITGDQALT  703 (784)
Q Consensus       670 ~~~d~lr~da~~~I~~L~~agi~v~MITGDn~~T  703 (784)
                      ..++++.|++.++++.|++.|+++.++||=....
T Consensus       184 ~~~~~~~~g~~e~L~~L~~~g~~~~v~T~k~~~~  217 (301)
T 1ltq_A          184 CDTDVINPMVVELSKMYALMGYQIVVVSGRESGT  217 (301)
T ss_dssp             GGGCCBCHHHHHHHHHHHHTTCEEEEEECSCCCC
T ss_pred             ccccCCChHHHHHHHHHHHCCCeEEEEeCCCccc
Confidence            3467889999999999999999999999987543


No 139
>3zvl_A Bifunctional polynucleotide phosphatase/kinase; hydrolase-transferase complex, base excision repair, BER, non-homologous END-joining, NHEJ; 1.65A {Mus musculus} PDB: 3zvm_A* 3zvn_A* 1yj5_A 3u7e_B* 3u7f_B* 3u7h_B* 3u7g_A*
Probab=29.83  E-value=35  Score=37.02  Aligned_cols=40  Identities=18%  Similarity=0.164  Sum_probs=33.5

Q ss_pred             CCcchHHHHHHHhhCCCcEEEEcCCC------------HHHHHHHHHHcccc
Q 003952          675 IREDSAKILSELKNSSQDLAMITGDQ------------ALTACYVASQVHIV  714 (784)
Q Consensus       675 lr~da~~~I~~L~~agi~v~MITGDn------------~~TA~~VA~~~gI~  714 (784)
                      +-|++.++|+.|+++|+++.++|+-.            ...+..+.+++|+.
T Consensus        88 ~~pgv~e~L~~L~~~G~~l~IvTN~~gi~~g~~~~~~~~~~~~~~l~~lgl~  139 (416)
T 3zvl_A           88 LYPEIPKKLQELAAEGYKLVIFTNQMGIGRGKLPAEVFKGKVEAVLEKLGVP  139 (416)
T ss_dssp             SCTTHHHHHHHHHHTTCEEEEEEECHHHHTTSSCHHHHHHHHHHHHHHHTSC
T ss_pred             hcccHHHHHHHHHHCCCeEEEEeCCccccCCCCCHHHHHHHHHHHHHHcCCC
Confidence            67999999999999999999999955            22367778888873


No 140
>4g9b_A Beta-PGM, beta-phosphoglucomutase; HAD, putative phosphoglucomutase, enzyme function initiative structural genomics, isomerase; 1.70A {Escherichia coli}
Probab=29.53  E-value=81  Score=30.74  Aligned_cols=46  Identities=7%  Similarity=0.090  Sum_probs=36.8

Q ss_pred             CCCcchHHHHHHHhhCCCcEEEEcCCCHHHHHHHHHHcccccCCcEEE
Q 003952          674 PIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLIL  721 (784)
Q Consensus       674 ~lr~da~~~I~~L~~agi~v~MITGDn~~TA~~VA~~~gI~~~~~~il  721 (784)
                      ++.|++.+.++.|++.|+++.++|...  .+..+-+..|+......+.
T Consensus        95 ~~~pg~~~ll~~L~~~g~~i~i~t~~~--~~~~~l~~~gl~~~fd~i~  140 (243)
T 4g9b_A           95 AVLPGIRSLLADLRAQQISVGLASVSL--NAPTILAALELREFFTFCA  140 (243)
T ss_dssp             GBCTTHHHHHHHHHHTTCEEEECCCCT--THHHHHHHTTCGGGCSEEC
T ss_pred             cccccHHHHHHhhhcccccceeccccc--chhhhhhhhhhcccccccc
Confidence            568999999999999999999999754  3556678889876555554


No 141
>1ccw_A Protein (glutamate mutase); coenzyme B12, radical reaction, TIM-barrel rossman-fold, isomerase; HET: CNC TAR; 1.60A {Clostridium cochlearium} SCOP: c.23.6.1 PDB: 1cb7_A* 1b1a_A 1i9c_A* 1be1_A 1fmf_A 1id8_A*
Probab=29.29  E-value=54  Score=29.46  Aligned_cols=82  Identities=10%  Similarity=0.026  Sum_probs=53.6

Q ss_pred             HHHhhccCeEEEEEEEeCCCCChhhHhhhhhhhccCCcEEEEEEeecCCCCcchHHHHHHHhhCCC--cEEEEcCCC---
Q 003952          626 KKYTHQGSRVLALAFKSLPDMTVSDARSLHRDEVENGLTFAGFAVFNCPIREDSAKILSELKNSSQ--DLAMITGDQ---  700 (784)
Q Consensus       626 ~~~~~~G~Rvlala~k~l~~~~~~~~~~~~r~~~E~~l~flG~l~~~d~lr~da~~~I~~L~~agi--~v~MITGDn---  700 (784)
                      .-+...|++|+.++.. .+   .++   +-+...+.+-..+|+-....+--+..+++++.|+++|.  -.+|+-|=-   
T Consensus        25 ~~l~~~G~~Vi~lG~~-~p---~e~---~v~~a~~~~~d~v~lS~~~~~~~~~~~~~i~~l~~~g~~~i~v~vGG~~~~~   97 (137)
T 1ccw_A           25 HAFTNAGFNVVNIGVL-SP---QEL---FIKAAIETKADAILVSSLYGQGEIDCKGLRQKCDEAGLEGILLYVGGNIVVG   97 (137)
T ss_dssp             HHHHHTTCEEEEEEEE-EC---HHH---HHHHHHHHTCSEEEEEECSSTHHHHHTTHHHHHHHTTCTTCEEEEEESCSSS
T ss_pred             HHHHHCCCEEEECCCC-CC---HHH---HHHHHHhcCCCEEEEEecCcCcHHHHHHHHHHHHhcCCCCCEEEEECCCcCc
Confidence            4567899999999863 22   222   22223345666778877777777789999999999886  235666621   


Q ss_pred             ---HHHHHHHHHHcccc
Q 003952          701 ---ALTACYVASQVHIV  714 (784)
Q Consensus       701 ---~~TA~~VA~~~gI~  714 (784)
                         .......+++.|+.
T Consensus        98 ~~~~~~~~~~~~~~G~d  114 (137)
T 1ccw_A           98 KQHWPDVEKRFKDMGYD  114 (137)
T ss_dssp             SCCHHHHHHHHHHTTCS
T ss_pred             hHhhhhhHHHHHHCCCC
Confidence               12224568899984


No 142
>3um9_A Haloacid dehalogenase, type II; haloacid dehalogenase-like hydrolase protein superfamily, defluorinase, hydrolase; 2.19A {Polaromonas SP}
Probab=28.94  E-value=1.4e+02  Score=27.86  Aligned_cols=87  Identities=7%  Similarity=0.056  Sum_probs=48.9

Q ss_pred             hhHHHHHHHHhhccCeEEEEEEEeCCCCChhhHhh-hhhhhccCCcEEEEEEeec--CCCCcchHHHHHHHhhCCC---c
Q 003952          619 SSYIETYKKYTHQGSRVLALAFKSLPDMTVSDARS-LHRDEVENGLTFAGFAVFN--CPIREDSAKILSELKNSSQ---D  692 (784)
Q Consensus       619 ~~~~~~~~~~~~~G~Rvlala~k~l~~~~~~~~~~-~~r~~~E~~l~flG~l~~~--d~lr~da~~~I~~L~~agi---~  692 (784)
                      +...+.++.+.++|+++..+.-.     ....... +.+..+..-  |-..+.-+  ..-||+..-.-..++..|+   +
T Consensus        99 ~~~~~~l~~l~~~g~~~~i~s~~-----~~~~~~~~l~~~~l~~~--f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~  171 (230)
T 3um9_A           99 ADVPQALQQLRAAGLKTAILSNG-----SRHSIRQVVGNSGLTNS--FDHLISVDEVRLFKPHQKVYELAMDTLHLGESE  171 (230)
T ss_dssp             TTHHHHHHHHHHTTCEEEEEESS-----CHHHHHHHHHHHTCGGG--CSEEEEGGGTTCCTTCHHHHHHHHHHHTCCGGG
T ss_pred             CCHHHHHHHHHhCCCeEEEEeCC-----CHHHHHHHHHHCCChhh--cceeEehhhcccCCCChHHHHHHHHHhCCCccc
Confidence            34566677888899998776621     1111111 111111111  22222222  2345555555555566676   5


Q ss_pred             EEEEcCCCHHHHHHHHHHcccc
Q 003952          693 LAMITGDQALTACYVASQVHIV  714 (784)
Q Consensus       693 v~MITGDn~~TA~~VA~~~gI~  714 (784)
                      ++++ ||+. +=+..|+.+|+-
T Consensus       172 ~~~i-GD~~-~Di~~a~~aG~~  191 (230)
T 3um9_A          172 ILFV-SCNS-WDATGAKYFGYP  191 (230)
T ss_dssp             EEEE-ESCH-HHHHHHHHHTCC
T ss_pred             EEEE-eCCH-HHHHHHHHCCCE
Confidence            7777 9997 889999999984


No 143
>1rlm_A Phosphatase; HAD family, rossman fold, hydrolase; 1.90A {Escherichia coli} SCOP: c.108.1.10 PDB: 1rlt_A 1rlo_A* 2hf2_A
Probab=28.28  E-value=21  Score=35.82  Aligned_cols=40  Identities=13%  Similarity=0.136  Sum_probs=33.6

Q ss_pred             CCCcch-HHHHHHHhhCCCcEEEEcCCCHHHHHHHHHHccc
Q 003952          674 PIREDS-AKILSELKNSSQDLAMITGDQALTACYVASQVHI  713 (784)
Q Consensus       674 ~lr~da-~~~I~~L~~agi~v~MITGDn~~TA~~VA~~~gI  713 (784)
                      .+-+.+ .++|++|++.|+++++.||=....+..+.+++++
T Consensus        20 ~i~~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~   60 (271)
T 1rlm_A           20 TYNQPRFMAQYQELKKRGIKFVVASGNQYYQLISFFPELKD   60 (271)
T ss_dssp             CCCHHHHHHHHHHHHHHTCEEEEECSSCHHHHGGGCTTTTT
T ss_pred             cCCHHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHhcCC
Confidence            355664 8999999999999999999999888887777763


No 144
>2oyc_A PLP phosphatase, pyridoxal phosphate phosphatase; structural genomics, NYSGXRC, NEW YORK SGX research center for structural genomics, PSI-2; 1.72A {Homo sapiens} PDB: 2p27_A 2p69_A* 2cft_A* 2cfs_A 2cfr_A*
Probab=27.97  E-value=30  Score=35.44  Aligned_cols=42  Identities=5%  Similarity=0.038  Sum_probs=33.8

Q ss_pred             CCCCcchHHHHHHHhhCCCcEEEEc---CCCHHHHHHHHHHcccc
Q 003952          673 CPIREDSAKILSELKNSSQDLAMIT---GDQALTACYVASQVHIV  714 (784)
Q Consensus       673 d~lr~da~~~I~~L~~agi~v~MIT---GDn~~TA~~VA~~~gI~  714 (784)
                      +++-+++.++|+.|++.|++++++|   |-.........+++|+.
T Consensus        36 ~~~~~~~~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~~~~~~g~~   80 (306)
T 2oyc_A           36 ERAVPGAPELLERLARAGKAALFVSNNSRRARPELALRFARLGFG   80 (306)
T ss_dssp             TEECTTHHHHHHHHHHTTCEEEEEECCCSSCHHHHHHHHHHTTCC
T ss_pred             CccCcCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHhcCCC
Confidence            4556789999999999999999999   56666666666777774


No 145
>3fzq_A Putative hydrolase; YP_001086940.1, putative haloacid dehalogenase-like hydrolas structural genomics, joint center for structural genomics; HET: MSE; 2.10A {Clostridium difficile} SCOP: c.108.1.0
Probab=27.70  E-value=25  Score=34.97  Aligned_cols=41  Identities=12%  Similarity=0.044  Sum_probs=36.9

Q ss_pred             CCCcchHHHHHHHhhCCCcEEEEcCCCHHHHHHHHHHcccc
Q 003952          674 PIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIV  714 (784)
Q Consensus       674 ~lr~da~~~I~~L~~agi~v~MITGDn~~TA~~VA~~~gI~  714 (784)
                      .+-+.+.++|+++++.|+++++.||-....+..+.+++|+.
T Consensus        22 ~i~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~~~~~   62 (274)
T 3fzq_A           22 GIPESAKHAIRLCQKNHCSVVICTGRSMGTIQDDVLSLGVD   62 (274)
T ss_dssp             BCCHHHHHHHHHHHHTTCEEEEECSSCTTTSCHHHHTTCCS
T ss_pred             cCCHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHcCCC
Confidence            46788999999999999999999999999999998888863


No 146
>3umb_A Dehalogenase-like hydrolase; 2.20A {Ralstonia solanacearum}
Probab=26.59  E-value=1.5e+02  Score=27.89  Aligned_cols=87  Identities=6%  Similarity=-0.028  Sum_probs=48.2

Q ss_pred             hhHHHHHHHHhhccCeEEEEEEEeCCCCChhhHhh-hhhhhccCCcEEEEEEeecC--CCCcchHHHHHHHhhCCC---c
Q 003952          619 SSYIETYKKYTHQGSRVLALAFKSLPDMTVSDARS-LHRDEVENGLTFAGFAVFNC--PIREDSAKILSELKNSSQ---D  692 (784)
Q Consensus       619 ~~~~~~~~~~~~~G~Rvlala~k~l~~~~~~~~~~-~~r~~~E~~l~flG~l~~~d--~lr~da~~~I~~L~~agi---~  692 (784)
                      +...+.++.+.++|+++..+.-     ........ +.+..+..-  |-..+.-++  .-||+..-....+++.|+   +
T Consensus       102 ~~~~~~l~~l~~~g~~~~i~t~-----~~~~~~~~~l~~~~l~~~--f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~  174 (233)
T 3umb_A          102 PENVPVLRQLREMGLPLGILSN-----GNPQMLEIAVKSAGMSGL--FDHVLSVDAVRLYKTAPAAYALAPRAFGVPAAQ  174 (233)
T ss_dssp             TTHHHHHHHHHTTTCCEEEEES-----SCHHHHHHHHHTTTCTTT--CSEEEEGGGTTCCTTSHHHHTHHHHHHTSCGGG
T ss_pred             CCHHHHHHHHHhCCCcEEEEeC-----CCHHHHHHHHHHCCcHhh--cCEEEEecccCCCCcCHHHHHHHHHHhCCCccc
Confidence            3456677888889998877662     11111111 111112111  222232222  335554444445555565   6


Q ss_pred             EEEEcCCCHHHHHHHHHHcccc
Q 003952          693 LAMITGDQALTACYVASQVHIV  714 (784)
Q Consensus       693 v~MITGDn~~TA~~VA~~~gI~  714 (784)
                      ++|+ ||+ .+=+..|+.+|+-
T Consensus       175 ~~~v-GD~-~~Di~~a~~~G~~  194 (233)
T 3umb_A          175 ILFV-SSN-GWDACGATWHGFT  194 (233)
T ss_dssp             EEEE-ESC-HHHHHHHHHHTCE
T ss_pred             EEEE-eCC-HHHHHHHHHcCCE
Confidence            8888 999 6788999999985


No 147
>3zx4_A MPGP, mannosyl-3-phosphoglycerate phosphatase; hydrolase, haloalkanoid acid dehalogenase-like phosphatase, crystallographic snapshot; HET: 2M8; 1.74A {Thermus thermophilus} PDB: 3zty_A 3zu6_A* 3ztw_A* 3zw7_A* 3zwd_A* 3zwk_A 3zup_A* 3zx5_A*
Probab=26.47  E-value=41  Score=33.35  Aligned_cols=36  Identities=8%  Similarity=0.034  Sum_probs=32.0

Q ss_pred             CCCcchHHHHHHHhhCCCcEEEEcCCCHHHHHHHHHHccc
Q 003952          674 PIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHI  713 (784)
Q Consensus       674 ~lr~da~~~I~~L~~agi~v~MITGDn~~TA~~VA~~~gI  713 (784)
                      .+-+.+.++|++|++.|+++++.||-....+.    ++|+
T Consensus        16 ~i~~~~~~al~~l~~~Gi~v~iaTGR~~~~~~----~l~~   51 (259)
T 3zx4_A           16 GELGPAREALERLRALGVPVVPVTAKTRKEVE----ALGL   51 (259)
T ss_dssp             SSCSTTHHHHHHHHHTTCCEEEBCSSCHHHHH----HTTC
T ss_pred             cCCHHHHHHHHHHHHCCCeEEEEeCCCHHHHH----HcCC
Confidence            56788999999999999999999999988776    7775


No 148
>2q5c_A NTRC family transcriptional regulator; structural genomics, protein structure initiative; HET: SO4 GOL; 1.49A {Clostridium acetobutylicum atcc 824}
Probab=26.13  E-value=1.6e+02  Score=28.09  Aligned_cols=81  Identities=10%  Similarity=0.104  Sum_probs=53.3

Q ss_pred             hHHHHHHHHhhccCeEEEEEEEeCCCCChhhHhhhhhhhccCCcEEEEEEeecCCCCcchHHHHHHHhhCCCcEEEEcCC
Q 003952          620 SYIETYKKYTHQGSRVLALAFKSLPDMTVSDARSLHRDEVENGLTFAGFAVFNCPIREDSAKILSELKNSSQDLAMITGD  699 (784)
Q Consensus       620 ~~~~~~~~~~~~G~Rvlala~k~l~~~~~~~~~~~~r~~~E~~l~flG~l~~~d~lr~da~~~I~~L~~agi~v~MITGD  699 (784)
                      ++-..+....+.+.++-.++|...... ...+.+    -+..++..   ..+  .-..|+.+.|++|++.|+++++=  |
T Consensus        82 Dil~al~~a~~~~~kIavvg~~~~~~~-~~~~~~----ll~~~i~~---~~~--~~~~e~~~~i~~l~~~G~~vvVG--~  149 (196)
T 2q5c_A           82 DTMRAVYNAKRFGNELALIAYKHSIVD-KHEIEA----MLGVKIKE---FLF--SSEDEITTLISKVKTENIKIVVS--G  149 (196)
T ss_dssp             HHHHHHHHHGGGCSEEEEEEESSCSSC-HHHHHH----HHTCEEEE---EEE--CSGGGHHHHHHHHHHTTCCEEEE--C
T ss_pred             HHHHHHHHHHhhCCcEEEEeCcchhhH-HHHHHH----HhCCceEE---EEe--CCHHHHHHHHHHHHHCCCeEEEC--C
Confidence            455666666677889999999776432 111111    11222222   222  33578999999999999999764  3


Q ss_pred             CHHHHHHHHHHcccc
Q 003952          700 QALTACYVASQVHIV  714 (784)
Q Consensus       700 n~~TA~~VA~~~gI~  714 (784)
                        .+++..|++.|+.
T Consensus       150 --~~~~~~A~~~Gl~  162 (196)
T 2q5c_A          150 --KTVTDEAIKQGLY  162 (196)
T ss_dssp             --HHHHHHHHHTTCE
T ss_pred             --HHHHHHHHHcCCc
Confidence              3679999999985


No 149
>4dcc_A Putative haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 1.65A {Bacteroides thetaiotaomicron} PDB: 4dfd_A 4f71_A 4f72_A
Probab=26.06  E-value=50  Score=31.63  Aligned_cols=42  Identities=10%  Similarity=0.154  Sum_probs=35.2

Q ss_pred             CCCcchHHHHHHHhhCCCcEEEEcCCCHHHHHHHH------HHcccccC
Q 003952          674 PIREDSAKILSELKNSSQDLAMITGDQALTACYVA------SQVHIVTK  716 (784)
Q Consensus       674 ~lr~da~~~I~~L~~agi~v~MITGDn~~TA~~VA------~~~gI~~~  716 (784)
                      ++.|++.++++.|++. +++.++|+.+...+..+.      +..|+...
T Consensus       112 ~~~~~~~~~l~~l~~~-~~~~i~Sn~~~~~~~~~~~~l~~~~~~~l~~~  159 (229)
T 4dcc_A          112 DIPTYKLDLLLKLREK-YVVYLLSNTNDIHWKWVCKNAFPYRTFKVEDY  159 (229)
T ss_dssp             CCCHHHHHHHHHHTTT-SEEEEEECCCHHHHHHHHHHTSCBTTBCHHHH
T ss_pred             hccHHHHHHHHHHHhc-CcEEEEECCChHHHHHHHhhhhhhccCCHHHh
Confidence            4679999999999999 999999999998888777      55677543


No 150
>2hx1_A Predicted sugar phosphatases of the HAD superfamily; ZP_00311070.1, possible sugar phosphatase, structural genomics; HET: MSE EPE; 2.10A {Cytophaga hutchinsonii}
Probab=26.02  E-value=34  Score=34.43  Aligned_cols=42  Identities=12%  Similarity=0.093  Sum_probs=34.1

Q ss_pred             CCCCcchHHHHHHHhhCCCcEEEEcC---CCHHHHHHHHHHcccc
Q 003952          673 CPIREDSAKILSELKNSSQDLAMITG---DQALTACYVASQVHIV  714 (784)
Q Consensus       673 d~lr~da~~~I~~L~~agi~v~MITG---Dn~~TA~~VA~~~gI~  714 (784)
                      +++-+++.++|+.|++.|++++++||   -.........+++|+.
T Consensus        29 ~~~~~~~~~~l~~l~~~g~~~~~~Tn~~~r~~~~~~~~l~~lg~~   73 (284)
T 2hx1_A           29 NGLLPGIENTFDYLKAQGQDYYIVTNDASRSPEQLADSYHKLGLF   73 (284)
T ss_dssp             TEECTTHHHHHHHHHHTTCEEEEEECCCSSCHHHHHHHHHHTTCT
T ss_pred             CeeChhHHHHHHHHHHCCCEEEEEeCCCCcCHHHHHHHHHHCCcC
Confidence            34457899999999999999999996   5566666777888875


No 151
>1zrn_A L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseudomonas SP} SCOP: c.108.1.1 PDB: 1zrm_A 1jud_A 1qh9_A
Probab=25.89  E-value=1.7e+02  Score=27.56  Aligned_cols=86  Identities=7%  Similarity=0.066  Sum_probs=46.4

Q ss_pred             hHHHHHHHHhhccCeEEEEEEEeCCCCChhhHhh-hhhhhccCCcEEEEEEeecC--CCCcchHHHHHHHhhCCC---cE
Q 003952          620 SYIETYKKYTHQGSRVLALAFKSLPDMTVSDARS-LHRDEVENGLTFAGFAVFNC--PIREDSAKILSELKNSSQ---DL  693 (784)
Q Consensus       620 ~~~~~~~~~~~~G~Rvlala~k~l~~~~~~~~~~-~~r~~~E~~l~flG~l~~~d--~lr~da~~~I~~L~~agi---~v  693 (784)
                      ...+.++.+.++|+++..+.-+     ....... +.+-.+..  .|-..+.-++  .-||+..-....+++.|+   ++
T Consensus        99 ~~~~~l~~l~~~g~~~~i~t~~-----~~~~~~~~l~~~~l~~--~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~  171 (232)
T 1zrn_A           99 EVPDSLRELKRRGLKLAILSNG-----SPQSIDAVVSHAGLRD--GFDHLLSVDPVQVYKPDNRVYELAEQALGLDRSAI  171 (232)
T ss_dssp             THHHHHHHHHHTTCEEEEEESS-----CHHHHHHHHHHTTCGG--GCSEEEESGGGTCCTTSHHHHHHHHHHHTSCGGGE
T ss_pred             cHHHHHHHHHHCCCEEEEEeCC-----CHHHHHHHHHhcChHh--hhheEEEecccCCCCCCHHHHHHHHHHcCCCcccE
Confidence            4456677788889988766521     1111111 11111111  1223332222  345554333344555566   58


Q ss_pred             EEEcCCCHHHHHHHHHHcccc
Q 003952          694 AMITGDQALTACYVASQVHIV  714 (784)
Q Consensus       694 ~MITGDn~~TA~~VA~~~gI~  714 (784)
                      +|+ ||+. .-+..|+.+|+.
T Consensus       172 ~~i-GD~~-~Di~~a~~aG~~  190 (232)
T 1zrn_A          172 LFV-ASNA-WDATGARYFGFP  190 (232)
T ss_dssp             EEE-ESCH-HHHHHHHHHTCC
T ss_pred             EEE-eCCH-HHHHHHHHcCCE
Confidence            888 9997 788899999984


No 152
>4g9b_A Beta-PGM, beta-phosphoglucomutase; HAD, putative phosphoglucomutase, enzyme function initiative structural genomics, isomerase; 1.70A {Escherichia coli}
Probab=25.79  E-value=84  Score=30.59  Aligned_cols=86  Identities=12%  Similarity=-0.025  Sum_probs=50.5

Q ss_pred             hhHHHHHHHHhhccCeEEEEEEEeCCCCChhhHhhhhhhhccCCcEEEEEEeecC--CCCcchHHHHHHHhhCCC---cE
Q 003952          619 SSYIETYKKYTHQGSRVLALAFKSLPDMTVSDARSLHRDEVENGLTFAGFAVFNC--PIREDSAKILSELKNSSQ---DL  693 (784)
Q Consensus       619 ~~~~~~~~~~~~~G~Rvlala~k~l~~~~~~~~~~~~r~~~E~~l~flG~l~~~d--~lr~da~~~I~~L~~agi---~v  693 (784)
                      +...+.++.+.++|+++..+.-+    ...  ...+.+-.+..-  |-.++.-++  .-||+-.-....+++.|+   ++
T Consensus        98 pg~~~ll~~L~~~g~~i~i~t~~----~~~--~~~l~~~gl~~~--fd~i~~~~~~~~~KP~p~~~~~a~~~lg~~p~e~  169 (243)
T 4g9b_A           98 PGIRSLLADLRAQQISVGLASVS----LNA--PTILAALELREF--FTFCADASQLKNSKPDPEIFLAACAGLGVPPQAC  169 (243)
T ss_dssp             TTHHHHHHHHHHTTCEEEECCCC----TTH--HHHHHHTTCGGG--CSEECCGGGCSSCTTSTHHHHHHHHHHTSCGGGE
T ss_pred             ccHHHHHHhhhcccccceecccc----cch--hhhhhhhhhccc--cccccccccccCCCCcHHHHHHHHHHcCCChHHE
Confidence            34566777888899876443311    111  111222222211  222222222  347777667777777787   68


Q ss_pred             EEEcCCCHHHHHHHHHHcccc
Q 003952          694 AMITGDQALTACYVASQVHIV  714 (784)
Q Consensus       694 ~MITGDn~~TA~~VA~~~gI~  714 (784)
                      +|| ||++ +-+.-|+++|+.
T Consensus       170 l~V-gDs~-~di~aA~~aG~~  188 (243)
T 4g9b_A          170 IGI-EDAQ-AGIDAINASGMR  188 (243)
T ss_dssp             EEE-ESSH-HHHHHHHHHTCE
T ss_pred             EEE-cCCH-HHHHHHHHcCCE
Confidence            888 9996 799999999995


No 153
>2rbk_A Putative uncharacterized protein; HAD-like phosphatase, unknown function; 1.00A {Bacteroides thetaiotaomicron} SCOP: c.108.1.10 PDB: 1ymq_A 2rb5_A 2rav_A 2rar_A
Probab=25.26  E-value=18  Score=36.07  Aligned_cols=37  Identities=14%  Similarity=0.156  Sum_probs=32.9

Q ss_pred             CCcchHHHHHHHhhCCCcEEEEcCCCHHHHHHHHHHcc
Q 003952          675 IREDSAKILSELKNSSQDLAMITGDQALTACYVASQVH  712 (784)
Q Consensus       675 lr~da~~~I~~L~~agi~v~MITGDn~~TA~~VA~~~g  712 (784)
                      +.+.++++|++|++.|+++++.||-+ ..+..+.+++|
T Consensus        21 i~~~~~~al~~l~~~G~~~~iaTGR~-~~~~~~~~~l~   57 (261)
T 2rbk_A           21 IPSSTIEALEAAHAKGLKIFIATGRP-KAIINNLSELQ   57 (261)
T ss_dssp             CCHHHHHHHHHHHHTTCEEEEECSSC-GGGCCSCHHHH
T ss_pred             CCHHHHHHHHHHHHCCCEEEEECCCh-HHHHHHHHHhC
Confidence            67889999999999999999999998 77777777777


No 154
>3p6l_A Sugar phosphate isomerase/epimerase; TIM barrel, structural genomics, joint center for structural genomics, JCSG; HET: CIT; 1.85A {Parabacteroides distasonis}
Probab=25.01  E-value=2.7e+02  Score=27.09  Aligned_cols=95  Identities=12%  Similarity=0.124  Sum_probs=66.3

Q ss_pred             hHHHHHHHHhhccCeEEEEEEEeC-----------CCCChhhHhhhhhhhccCCcEEEEEEeecCCCCcchHHHHHHHhh
Q 003952          620 SYIETYKKYTHQGSRVLALAFKSL-----------PDMTVSDARSLHRDEVENGLTFAGFAVFNCPIREDSAKILSELKN  688 (784)
Q Consensus       620 ~~~~~~~~~~~~G~Rvlala~k~l-----------~~~~~~~~~~~~r~~~E~~l~flG~l~~~d~lr~da~~~I~~L~~  688 (784)
                      .+.+.++..++.|+.-+=+.....           ...+..+...+.+.--+.++.+.++-...+...++.+++|+..+.
T Consensus        23 ~~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~i~~~~~~~~~~~~~~~~~i~~A~~  102 (262)
T 3p6l_A           23 PLTEALDKTQELGLKYIEIYPGHKLGGKWGDKVFDFNLDAQTQKEIKELAASKGIKIVGTGVYVAEKSSDWEKMFKFAKA  102 (262)
T ss_dssp             CHHHHHHHHHHTTCCEEEECTTEECCGGGTTCEESTTCCHHHHHHHHHHHHHTTCEEEEEEEECCSSTTHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHcCCCEEeecCCcccccccccccccccCCHHHHHHHHHHHHHcCCeEEEEeccCCccHHHHHHHHHHHHH
Confidence            466778888899999888764321           112223344444444567888888877777778899999999999


Q ss_pred             CCCcEEEE-cC-CCHHHHHHHHHHcccc
Q 003952          689 SSQDLAMI-TG-DQALTACYVASQVHIV  714 (784)
Q Consensus       689 agi~v~MI-TG-Dn~~TA~~VA~~~gI~  714 (784)
                      .|.+.+.+ +| +.-......|++.|+.
T Consensus       103 lGa~~v~~~~~~~~~~~l~~~a~~~gv~  130 (262)
T 3p6l_A          103 MDLEFITCEPALSDWDLVEKLSKQYNIK  130 (262)
T ss_dssp             TTCSEEEECCCGGGHHHHHHHHHHHTCE
T ss_pred             cCCCEEEecCCHHHHHHHHHHHHHhCCE
Confidence            99976555 44 4556677788888873


No 155
>3l7y_A Putative uncharacterized protein SMU.1108C; hydrolase; 2.00A {Streptococcus mutans}
Probab=23.86  E-value=36  Score=34.70  Aligned_cols=39  Identities=10%  Similarity=0.106  Sum_probs=34.6

Q ss_pred             CCcc-hHHHHHHHhhCCCcEEEEcCCCHHHHHHHHHHccc
Q 003952          675 IRED-SAKILSELKNSSQDLAMITGDQALTACYVASQVHI  713 (784)
Q Consensus       675 lr~d-a~~~I~~L~~agi~v~MITGDn~~TA~~VA~~~gI  713 (784)
                      +-+. +.++|++|++.|+.+++.||-....+..+.+++|+
T Consensus        55 i~~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~   94 (304)
T 3l7y_A           55 YDHNRFQRILKQLQERDIRFVVASSNPYRQLREHFPDCHE   94 (304)
T ss_dssp             CCHHHHHHHHHHHHHTTCEEEEECSSCHHHHHTTCTTTGG
T ss_pred             cCHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHhCC
Confidence            4555 78999999999999999999999999988888775


No 156
>1u02_A Trehalose-6-phosphate phosphatase related protein; structural genomics, PSI; 1.92A {Thermoplasma acidophilum} SCOP: c.108.1.15
Probab=23.83  E-value=36  Score=33.47  Aligned_cols=37  Identities=16%  Similarity=0.126  Sum_probs=33.2

Q ss_pred             CCCcchHHHHHHHhhCCCcEEEEcCCCHHHHHHHHHHc
Q 003952          674 PIREDSAKILSELKNSSQDLAMITGDQALTACYVASQV  711 (784)
Q Consensus       674 ~lr~da~~~I~~L~~agi~v~MITGDn~~TA~~VA~~~  711 (784)
                      .+-+.+.++|++|++.| +++++||=....+..+.+++
T Consensus        23 ~i~~~~~~al~~l~~~g-~v~iaTGR~~~~~~~~~~~l   59 (239)
T 1u02_A           23 YADAGLLSLISDLKERF-DTYIVTGRSPEEISRFLPLD   59 (239)
T ss_dssp             CCCHHHHHHHHHHHHHS-EEEEECSSCHHHHHHHSCSS
T ss_pred             CCCHHHHHHHHHHhcCC-CEEEEeCCCHHHHHHHhccc
Confidence            46788999999999999 99999999999988887765


No 157
>3umg_A Haloacid dehalogenase; defluorinase, hydrolase; 2.25A {Rhodococcus jostii}
Probab=23.17  E-value=57  Score=31.32  Aligned_cols=40  Identities=15%  Similarity=0.061  Sum_probs=36.5

Q ss_pred             CCCcchHHHHHHHhhCCCcEEEEcCCCHHHHHHHHHHcccc
Q 003952          674 PIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIV  714 (784)
Q Consensus       674 ~lr~da~~~I~~L~~agi~v~MITGDn~~TA~~VA~~~gI~  714 (784)
                      ++.|++.+.++.|++. +++.++|+.....+..+.+.+|+.
T Consensus       116 ~~~~~~~~~l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~~~  155 (254)
T 3umg_A          116 TPWPDSVPGLTAIKAE-YIIGPLSNGNTSLLLDMAKNAGIP  155 (254)
T ss_dssp             CBCTTHHHHHHHHHHH-SEEEECSSSCHHHHHHHHHHHTCC
T ss_pred             cCCcCHHHHHHHHHhC-CeEEEEeCCCHHHHHHHHHhCCCC
Confidence            6689999999999997 999999999999999999999984


No 158
>2no4_A (S)-2-haloacid dehalogenase IVA; HAD superfamily, rossman fold, hydrol; 1.93A {Burkholderia cepacia} PDB: 2no5_A*
Probab=23.14  E-value=2e+02  Score=27.23  Aligned_cols=87  Identities=11%  Similarity=0.042  Sum_probs=47.5

Q ss_pred             hhHHHHHHHHhhccCeEEEEEEEeCCCCChhhHhh-hhhhhccCCcEEEEEEeecC--CCCcchHHHHHHHhhCCC---c
Q 003952          619 SSYIETYKKYTHQGSRVLALAFKSLPDMTVSDARS-LHRDEVENGLTFAGFAVFNC--PIREDSAKILSELKNSSQ---D  692 (784)
Q Consensus       619 ~~~~~~~~~~~~~G~Rvlala~k~l~~~~~~~~~~-~~r~~~E~~l~flG~l~~~d--~lr~da~~~I~~L~~agi---~  692 (784)
                      +...+.++.+.++|+++..+.-.     ....... +.+-.+..  .|-+.+.-++  .-||+..-....+++.|+   +
T Consensus       108 ~~~~~~l~~l~~~g~~~~i~s~~-----~~~~~~~~l~~~~l~~--~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~  180 (240)
T 2no4_A          108 PDAAETLEKLKSAGYIVAILSNG-----NDEMLQAALKASKLDR--VLDSCLSADDLKIYKPDPRIYQFACDRLGVNPNE  180 (240)
T ss_dssp             TTHHHHHHHHHHTTCEEEEEESS-----CHHHHHHHHHHTTCGG--GCSEEEEGGGTTCCTTSHHHHHHHHHHHTCCGGG
T ss_pred             CCHHHHHHHHHHCCCEEEEEcCC-----CHHHHHHHHHhcCcHH--HcCEEEEccccCCCCCCHHHHHHHHHHcCCCccc
Confidence            44566677888899988766521     1111111 11111111  1333333332  245554444444556666   5


Q ss_pred             EEEEcCCCHHHHHHHHHHcccc
Q 003952          693 LAMITGDQALTACYVASQVHIV  714 (784)
Q Consensus       693 v~MITGDn~~TA~~VA~~~gI~  714 (784)
                      ++|+ ||+. .=+..|+.+|+.
T Consensus       181 ~~~i-GD~~-~Di~~a~~aG~~  200 (240)
T 2no4_A          181 VCFV-SSNA-WDLGGAGKFGFN  200 (240)
T ss_dssp             EEEE-ESCH-HHHHHHHHHTCE
T ss_pred             EEEE-eCCH-HHHHHHHHCCCE
Confidence            8888 9996 678889999974


No 159
>2hhl_A CTD small phosphatase-like protein; CTD phosphatase, keggins anion, structural genomics, PSI, protein structure initiative; HET: KEG; 2.10A {Homo sapiens}
Probab=22.60  E-value=62  Score=31.03  Aligned_cols=43  Identities=16%  Similarity=0.033  Sum_probs=39.3

Q ss_pred             CCCCcchHHHHHHHhhCCCcEEEEcCCCHHHHHHHHHHcccccC
Q 003952          673 CPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTK  716 (784)
Q Consensus       673 d~lr~da~~~I~~L~~agi~v~MITGDn~~TA~~VA~~~gI~~~  716 (784)
                      -.+||++.+.++.|++. +++++.|.-....|..+.+.+|+...
T Consensus        67 v~~RPgv~efL~~l~~~-~~i~I~Tss~~~~a~~vl~~ld~~~~  109 (195)
T 2hhl_A           67 VLKRPHVDEFLQRMGQL-FECVLFTASLAKYADPVADLLDRWGV  109 (195)
T ss_dssp             EEECTTHHHHHHHHHHH-SEEEEECSSCHHHHHHHHHHHCCSSC
T ss_pred             EEeCcCHHHHHHHHHcC-CeEEEEcCCCHHHHHHHHHHhCCccc
Confidence            35799999999999998 99999999999999999999998643


No 160
>3fst_A 5,10-methylenetetrahydrofolate reductase; TIM barrel, flavin, amino-acid biosynthesis, FAD, flavoprotein, methionine biosynthesis, NAD; HET: FAD MRY; 1.65A {Escherichia coli k-12} PDB: 3fsu_A* 1zp3_A* 1zpt_A* 1zrq_A* 1zp4_A* 2fmn_A* 2fmo_A* 1b5t_A*
Probab=22.37  E-value=1e+02  Score=31.83  Aligned_cols=83  Identities=8%  Similarity=0.090  Sum_probs=50.4

Q ss_pred             HHHHHHHHhhccCeEEEEEEEeCCCCChhhHhhhhhhhccCCcEEEEEEeecCCCCcchHHHHHHHhhCCC-cEEEEcCC
Q 003952          621 YIETYKKYTHQGSRVLALAFKSLPDMTVSDARSLHRDEVENGLTFAGFAVFNCPIREDSAKILSELKNSSQ-DLAMITGD  699 (784)
Q Consensus       621 ~~~~~~~~~~~G~Rvlala~k~l~~~~~~~~~~~~r~~~E~~l~flG~l~~~d~lr~da~~~I~~L~~agi-~v~MITGD  699 (784)
                      +.+.++.+...+-..+.+.|-.-.........-..+-.-+.++..+--+...|.=|.+..+.+..++++|| ++..+|||
T Consensus        41 l~~~~~~l~~l~p~fvsVT~gagg~~r~~t~~~a~~i~~~~g~~~v~Hltc~~~~~~~l~~~L~~~~~~GI~nILaLrGD  120 (304)
T 3fst_A           41 LWNSIDRLSSLKPKFVSVTYGANSGERDRTHSIIKGIKDRTGLEAAPHLTCIDATPDELRTIARDYWNNGIRHIVALRGD  120 (304)
T ss_dssp             HHHHHHHHHTTCCSEEEECCCTTSSCHHHHHHHHHHHHHHHCCCEEEEEESTTSCHHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred             HHHHHHHHhcCCCCEEEEeeCCCCcchhHHHHHHHHHHHHhCCCeeEEeecCCCCHHHHHHHHHHHHHCCCCEEEEecCC
Confidence            33456666655544555544222111001111111122245777788888889899999999999999999 58889999


Q ss_pred             CHHH
Q 003952          700 QALT  703 (784)
Q Consensus       700 n~~T  703 (784)
                      .+..
T Consensus       121 pp~~  124 (304)
T 3fst_A          121 LPPG  124 (304)
T ss_dssp             CC--
T ss_pred             CCCC
Confidence            8765


No 161
>4gib_A Beta-phosphoglucomutase; rossmann fold, HAD-like, structural genomics, center for structural genomics of infectious DISE csgid, isomerase; 2.27A {Clostridium difficile}
Probab=21.47  E-value=1.2e+02  Score=29.48  Aligned_cols=86  Identities=8%  Similarity=-0.002  Sum_probs=50.1

Q ss_pred             hhHHHHHHHHhhccCeEEEEEEEeCCCCChhhHhhhhhhhccCCcEEEEEEeecC--CCCcchHHHHHHHhhCCC---cE
Q 003952          619 SSYIETYKKYTHQGSRVLALAFKSLPDMTVSDARSLHRDEVENGLTFAGFAVFNC--PIREDSAKILSELKNSSQ---DL  693 (784)
Q Consensus       619 ~~~~~~~~~~~~~G~Rvlala~k~l~~~~~~~~~~~~r~~~E~~l~flG~l~~~d--~lr~da~~~I~~L~~agi---~v  693 (784)
                      +...+.++.+.++|.++.....      .......+.+-.+..-  |-.++.-++  ..||+..-....+++.|+   ++
T Consensus       119 p~~~~ll~~Lk~~g~~i~i~~~------~~~~~~~L~~~gl~~~--Fd~i~~~~~~~~~KP~p~~~~~a~~~lg~~p~e~  190 (250)
T 4gib_A          119 PGIESLLIDVKSNNIKIGLSSA------SKNAINVLNHLGISDK--FDFIADAGKCKNNKPHPEIFLMSAKGLNVNPQNC  190 (250)
T ss_dssp             TTHHHHHHHHHHTTCEEEECCS------CTTHHHHHHHHTCGGG--CSEECCGGGCCSCTTSSHHHHHHHHHHTCCGGGE
T ss_pred             hhHHHHHHHHHhcccccccccc------cchhhhHhhhcccccc--cceeecccccCCCCCcHHHHHHHHHHhCCChHHe
Confidence            3456677788888987643221      1111112222222221  222222222  357777777777777787   57


Q ss_pred             EEEcCCCHHHHHHHHHHcccc
Q 003952          694 AMITGDQALTACYVASQVHIV  714 (784)
Q Consensus       694 ~MITGDn~~TA~~VA~~~gI~  714 (784)
                      +|| ||++ .-+.-|+++|+.
T Consensus       191 l~V-GDs~-~Di~aA~~aG~~  209 (250)
T 4gib_A          191 IGI-EDAS-AGIDAINSANMF  209 (250)
T ss_dssp             EEE-ESSH-HHHHHHHHTTCE
T ss_pred             EEE-CCCH-HHHHHHHHcCCE
Confidence            776 8997 789999999994


No 162
>2b82_A APHA, class B acid phosphatase; DDDD acid phosphatase, metallo-ENZ hydrolase; HET: ADN; 1.25A {Escherichia coli} SCOP: c.108.1.12 PDB: 2b8j_A* 2hf7_A 1rmt_A* 1n9k_A 1rmq_A 1n8n_A* 1rmy_A* 2g1a_A* 3cz4_A 2heg_A* 1z5g_A 1z5u_A* 1z88_A 2aut_A
Probab=21.14  E-value=35  Score=33.06  Aligned_cols=32  Identities=9%  Similarity=0.142  Sum_probs=26.3

Q ss_pred             CCcchHHHHHHHhhCCCcEEEEcCCCHHHHHH
Q 003952          675 IREDSAKILSELKNSSQDLAMITGDQALTACY  706 (784)
Q Consensus       675 lr~da~~~I~~L~~agi~v~MITGDn~~TA~~  706 (784)
                      +++++.+.++.|++.|+++.++||-....+..
T Consensus        89 ~~~~~~e~l~~L~~~G~~l~ivTn~~~~~~~~  120 (211)
T 2b82_A           89 PKEVARQLIDMHVRRGDAIFFVTGRSPTKTET  120 (211)
T ss_dssp             ECHHHHHHHHHHHHHTCEEEEEECSCCCSSCC
T ss_pred             CcHHHHHHHHHHHHCCCEEEEEcCCcHHHHHH
Confidence            36789999999999999999999986543333


No 163
>2l82_A Designed protein OR32; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, de novo protein; NMR {Artificial gene}
Probab=21.08  E-value=1.1e+02  Score=26.18  Aligned_cols=18  Identities=33%  Similarity=0.418  Sum_probs=13.6

Q ss_pred             HHHHHHHhhccCeEEEEE
Q 003952          622 IETYKKYTHQGSRVLALA  639 (784)
Q Consensus       622 ~~~~~~~~~~G~Rvlala  639 (784)
                      .+...+..++|.||+.+-
T Consensus        16 keivreikrqgvrvvlly   33 (162)
T 2l82_A           16 KEIVREIKRQGVRVVLLY   33 (162)
T ss_dssp             HHHHHHHHHTTCEEEEEE
T ss_pred             HHHHHHHHhCCeEEEEEe
Confidence            445677789999998764


No 164
>2i2x_B MTAC, methyltransferase 1; TIM barrel and helix bundle (MTAB), rossman fold and helix B (MTAC); HET: B13; 2.50A {Methanosarcina barkeri}
Probab=21.05  E-value=97  Score=31.05  Aligned_cols=80  Identities=11%  Similarity=0.064  Sum_probs=52.6

Q ss_pred             HHHhhccCeEEEEEEEeCCCCChhhHhhhhhhhccCCcEEEEEEeecCCCCcchHHHHHHHhhCCCcEEEEcCCCHHHHH
Q 003952          626 KKYTHQGSRVLALAFKSLPDMTVSDARSLHRDEVENGLTFAGFAVFNCPIREDSAKILSELKNSSQDLAMITGDQALTAC  705 (784)
Q Consensus       626 ~~~~~~G~Rvlala~k~l~~~~~~~~~~~~r~~~E~~l~flG~l~~~d~lr~da~~~I~~L~~agi~v~MITGDn~~TA~  705 (784)
                      .-+...|++|+.++.. .+..   ++   -+.-.+.+-..+|+-....+-.+..++.|+.|++.|.++.++=|=...+ .
T Consensus       145 ~~L~~~G~~Vi~LG~~-vp~e---~l---~~~~~~~~~d~V~lS~l~~~~~~~~~~~i~~l~~~~~~~~v~vGG~~~~-~  216 (258)
T 2i2x_B          145 ALLRANGYNVVDLGRD-VPAE---EV---LAAVQKEKPIMLTGTALMTTTMYAFKEVNDMLLENGIKIPFACGGGAVN-Q  216 (258)
T ss_dssp             HHHHHTTCEEEEEEEE-CCSH---HH---HHHHHHHCCSEEEEECCCTTTTTHHHHHHHHHHTTTCCCCEEEESTTCC-H
T ss_pred             HHHHHCCCEEEECCCC-CCHH---HH---HHHHHHcCCCEEEEEeeccCCHHHHHHHHHHHHhcCCCCcEEEECccCC-H
Confidence            3467899999999974 3322   11   1112234566788888777778899999999999998764443434333 3


Q ss_pred             HHHHHccc
Q 003952          706 YVASQVHI  713 (784)
Q Consensus       706 ~VA~~~gI  713 (784)
                      ..++++|-
T Consensus       217 ~~~~~iga  224 (258)
T 2i2x_B          217 DFVSQFAL  224 (258)
T ss_dssp             HHHHTSTT
T ss_pred             HHHHHcCC
Confidence            45666664


No 165
>2ght_A Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1; protein-peptide complex, HAD superfamily, hydrolase; HET: SEP; 1.80A {Homo sapiens} PDB: 2ghq_A* 3pgl_A* 1t9z_A* 1ta0_A* 3l0c_A 3l0y_A 3l0b_A* 2q5e_A
Probab=21.00  E-value=70  Score=30.12  Aligned_cols=41  Identities=17%  Similarity=0.053  Sum_probs=38.3

Q ss_pred             CCCcchHHHHHHHhhCCCcEEEEcCCCHHHHHHHHHHccccc
Q 003952          674 PIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVT  715 (784)
Q Consensus       674 ~lr~da~~~I~~L~~agi~v~MITGDn~~TA~~VA~~~gI~~  715 (784)
                      .+||++.+.++.|++. +++++.|.-....|..+.+.++...
T Consensus        55 ~~rPg~~efL~~l~~~-~~i~I~T~~~~~~a~~vl~~ld~~~   95 (181)
T 2ght_A           55 LKRPHVDEFLQRMGEL-FECVLFTASLAKYADPVADLLDKWG   95 (181)
T ss_dssp             EECTTHHHHHHHHHHH-SEEEEECSSCHHHHHHHHHHHCTTC
T ss_pred             EeCCCHHHHHHHHHhC-CCEEEEcCCCHHHHHHHHHHHCCCC
Confidence            5799999999999997 9999999999999999999999864


No 166
>1s2o_A SPP, sucrose-phosphatase; phosphohydrolase, HAD superfamily, cyanobacteria; 1.40A {Synechocystis SP} SCOP: c.108.1.10 PDB: 1tj3_A 1tj4_A* 1tj5_A* 1u2s_A* 1u2t_A* 2b1q_A* 2b1r_A* 2d2v_A*
Probab=20.80  E-value=65  Score=31.64  Aligned_cols=37  Identities=24%  Similarity=0.234  Sum_probs=30.8

Q ss_pred             cchHHHHHHHhhCCCcEEEEcCCCHHHHHHHHHHcccc
Q 003952          677 EDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIV  714 (784)
Q Consensus       677 ~da~~~I~~L~~agi~v~MITGDn~~TA~~VA~~~gI~  714 (784)
                      +.+.++|++++ .|+++++.||=....+..+.+++|+.
T Consensus        22 ~~~~~~l~~~~-~gi~v~iaTGR~~~~~~~~~~~l~l~   58 (244)
T 1s2o_A           22 EHLQEYLGDRR-GNFYLAYATGRSYHSARELQKQVGLM   58 (244)
T ss_dssp             HHHHHHHHTTG-GGEEEEEECSSCHHHHHHHHHHHTCC
T ss_pred             HHHHHHHHHhc-CCCEEEEEcCCCHHHHHHHHHHcCCC
Confidence            45667777766 58999999999999999999998764


No 167
>2yxb_A Coenzyme B12-dependent mutase; alpha/beta, structural genomics, NPPSFA, national project on structural and functional analyses; 1.80A {Aeropyrum pernix}
Probab=20.73  E-value=77  Score=29.30  Aligned_cols=81  Identities=11%  Similarity=0.159  Sum_probs=54.2

Q ss_pred             HHHhhccCeEEEEEEEeCCCCChhhHhhhhhhhccCCcEEEEEEeecCCCCcchHHHHHHHhhCCC--cEEEEcCCCHHH
Q 003952          626 KKYTHQGSRVLALAFKSLPDMTVSDARSLHRDEVENGLTFAGFAVFNCPIREDSAKILSELKNSSQ--DLAMITGDQALT  703 (784)
Q Consensus       626 ~~~~~~G~Rvlala~k~l~~~~~~~~~~~~r~~~E~~l~flG~l~~~d~lr~da~~~I~~L~~agi--~v~MITGDn~~T  703 (784)
                      ..+...|++|+.++...    ..++   +-+...+.+-..+|+-.....-.+..+++|+.|++.|.  -.+|+=| .+.+
T Consensus        40 ~~l~~~G~eVi~lG~~~----p~e~---lv~aa~~~~~diV~lS~~~~~~~~~~~~~i~~L~~~g~~~i~v~vGG-~~~~  111 (161)
T 2yxb_A           40 RALRDAGFEVVYTGLRQ----TPEQ---VAMAAVQEDVDVIGVSILNGAHLHLMKRLMAKLRELGADDIPVVLGG-TIPI  111 (161)
T ss_dssp             HHHHHTTCEEECCCSBC----CHHH---HHHHHHHTTCSEEEEEESSSCHHHHHHHHHHHHHHTTCTTSCEEEEE-CCCH
T ss_pred             HHHHHCCCEEEECCCCC----CHHH---HHHHHHhcCCCEEEEEeechhhHHHHHHHHHHHHhcCCCCCEEEEeC-CCch
Confidence            34677899999887321    2222   22233346677888888877888999999999999885  3466667 4333


Q ss_pred             -HHHHHHHcccc
Q 003952          704 -ACYVASQVHIV  714 (784)
Q Consensus       704 -A~~VA~~~gI~  714 (784)
                       -...+++.|+.
T Consensus       112 ~~~~~l~~~G~d  123 (161)
T 2yxb_A          112 PDLEPLRSLGIR  123 (161)
T ss_dssp             HHHHHHHHTTCC
T ss_pred             hcHHHHHHCCCc
Confidence             33357788874


No 168
>2pib_A Phosphorylated carbohydrates phosphatase TM_1254; 3D-structure, structural genomics, NPPSFA; HET: MSE GOL; 1.73A {Thermotoga maritima MSB8} PDB: 3kbb_A*
Probab=20.71  E-value=2.1e+02  Score=26.04  Aligned_cols=87  Identities=14%  Similarity=0.087  Sum_probs=47.7

Q ss_pred             hhHHHHHHHHhhccCeEEEEEEEeCCCCChhhHhh-hhhhhccCCcEEEEEEeecC--CCCcchHHHHHHHhhCCC---c
Q 003952          619 SSYIETYKKYTHQGSRVLALAFKSLPDMTVSDARS-LHRDEVENGLTFAGFAVFNC--PIREDSAKILSELKNSSQ---D  692 (784)
Q Consensus       619 ~~~~~~~~~~~~~G~Rvlala~k~l~~~~~~~~~~-~~r~~~E~~l~flG~l~~~d--~lr~da~~~I~~L~~agi---~  692 (784)
                      +...+.++.+.++|+++..+.-     ........ +.+-.+..  .|-..+.-++  .-||+....-..++..|+   +
T Consensus        87 ~~~~~~l~~l~~~g~~~~i~s~-----~~~~~~~~~l~~~~~~~--~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~  159 (216)
T 2pib_A           87 PGVREALEFVKSKRIKLALATS-----TPQREALERLRRLDLEK--YFDVMVFGDQVKNGKPDPEIYLLVLERLNVVPEK  159 (216)
T ss_dssp             TTHHHHHHHHHHTTCEEEEECS-----SCHHHHHHHHHHTTCGG--GCSEEECGGGSSSCTTSTHHHHHHHHHHTCCGGG
T ss_pred             cCHHHHHHHHHHCCCCEEEEeC-----CcHHhHHHHHHhcChHH--hcCEEeecccCCCCCcCcHHHHHHHHHcCCCCce
Confidence            4566777888889998876652     11111111 11111111  1222222222  235555444455566666   4


Q ss_pred             EEEEcCCCHHHHHHHHHHcccc
Q 003952          693 LAMITGDQALTACYVASQVHIV  714 (784)
Q Consensus       693 v~MITGDn~~TA~~VA~~~gI~  714 (784)
                      ++|+ ||+. +=+..|+.+|+.
T Consensus       160 ~i~i-GD~~-~Di~~a~~aG~~  179 (216)
T 2pib_A          160 VVVF-EDSK-SGVEAAKSAGIE  179 (216)
T ss_dssp             EEEE-ECSH-HHHHHHHHTTCC
T ss_pred             EEEE-eCcH-HHHHHHHHcCCc
Confidence            6665 9997 899999999983


No 169
>3kzx_A HAD-superfamily hydrolase, subfamily IA, variant; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ehrlich chaffeensis; 1.90A {Ehrlichia chaffeensis}
Probab=20.67  E-value=3.4e+02  Score=25.28  Aligned_cols=86  Identities=16%  Similarity=0.203  Sum_probs=46.2

Q ss_pred             hHHHHHHHHhhccCeEEEEEEEeCCCCChhhHhh-hhhhhccCCcEEEEEEeecC--CCCcchHHHHHHHhhCCC----c
Q 003952          620 SYIETYKKYTHQGSRVLALAFKSLPDMTVSDARS-LHRDEVENGLTFAGFAVFNC--PIREDSAKILSELKNSSQ----D  692 (784)
Q Consensus       620 ~~~~~~~~~~~~G~Rvlala~k~l~~~~~~~~~~-~~r~~~E~~l~flG~l~~~d--~lr~da~~~I~~L~~agi----~  692 (784)
                      ...+.++.+.++|+++..+.-...     ..... +.+-.+..  .|-+.+.-++  .-||+.......+++.|+    +
T Consensus       107 ~~~~~l~~l~~~g~~~~i~T~~~~-----~~~~~~l~~~gl~~--~f~~i~~~~~~~~~Kp~~~~~~~~~~~lgi~~~~~  179 (231)
T 3kzx_A          107 GAIELLDTLKENNITMAIVSNKNG-----ERLRSEIHHKNLTH--YFDSIIGSGDTGTIKPSPEPVLAALTNINIEPSKE  179 (231)
T ss_dssp             THHHHHHHHHHTTCEEEEEEEEEH-----HHHHHHHHHTTCGG--GCSEEEEETSSSCCTTSSHHHHHHHHHHTCCCSTT
T ss_pred             CHHHHHHHHHHCCCeEEEEECCCH-----HHHHHHHHHCCchh--heeeEEcccccCCCCCChHHHHHHHHHcCCCcccC
Confidence            445566778888999887764321     11110 11111111  1222222222  234444444445556666    3


Q ss_pred             EEEEcCCCHHHHHHHHHHcccc
Q 003952          693 LAMITGDQALTACYVASQVHIV  714 (784)
Q Consensus       693 v~MITGDn~~TA~~VA~~~gI~  714 (784)
                      ++ .=||+. +=+..|+.+|+.
T Consensus       180 ~v-~vGD~~-~Di~~a~~aG~~  199 (231)
T 3kzx_A          180 VF-FIGDSI-SDIQSAIEAGCL  199 (231)
T ss_dssp             EE-EEESSH-HHHHHHHHTTCE
T ss_pred             EE-EEcCCH-HHHHHHHHCCCe
Confidence            44 449999 999999999974


No 170
>2x4d_A HLHPP, phospholysine phosphohistidine inorganic pyrophos phosphatase; hydrolase; 1.92A {Homo sapiens}
Probab=20.57  E-value=96  Score=30.09  Aligned_cols=40  Identities=13%  Similarity=0.055  Sum_probs=35.1

Q ss_pred             CCcchHHHHHHHhhCCCcEEEEc---CCCHHHHHHHHHHcccc
Q 003952          675 IREDSAKILSELKNSSQDLAMIT---GDQALTACYVASQVHIV  714 (784)
Q Consensus       675 lr~da~~~I~~L~~agi~v~MIT---GDn~~TA~~VA~~~gI~  714 (784)
                      +-+.+.++++.|++.|++++.+|   |-.........+++|+.
T Consensus        33 ~~~~~~~a~~~l~~~G~~~~~~t~~~gr~~~~~~~~l~~~g~~   75 (271)
T 2x4d_A           33 AIAGSVEAVARLKRSRLKVRFCTNESAASRAELVGQLQRLGFD   75 (271)
T ss_dssp             ECTTHHHHHHHHHHSSSEEEEECCCCSSCHHHHHHHHHHTTCC
T ss_pred             cCcCHHHHHHHHHHCCCcEEEEECCCCCCHHHHHHHHHHCCCC
Confidence            45788999999999999999999   99988888888888774


No 171
>3smv_A S-(-)-azetidine-2-carboxylate hydrolase; haloacid dehalogenase superfamily, L-azetidine-2- carboxylate; HET: GOL; 1.38A {Pseudomonas}
Probab=20.52  E-value=65  Score=30.51  Aligned_cols=39  Identities=15%  Similarity=0.157  Sum_probs=32.9

Q ss_pred             CCCCcchHHHHHHHhhCCCcEEEEcCCCHHHHHHHHHHcc
Q 003952          673 CPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVH  712 (784)
Q Consensus       673 d~lr~da~~~I~~L~~agi~v~MITGDn~~TA~~VA~~~g  712 (784)
                      .++.|++.++++.|++ |+++.++|+.....+..+.+.++
T Consensus        98 ~~~~~~~~~~l~~l~~-~~~~~i~tn~~~~~~~~~l~~l~  136 (240)
T 3smv_A           98 WPAFPDTVEALQYLKK-HYKLVILSNIDRNEFKLSNAKLG  136 (240)
T ss_dssp             CCBCTTHHHHHHHHHH-HSEEEEEESSCHHHHHHHHTTTC
T ss_pred             CCCCCcHHHHHHHHHh-CCeEEEEeCCChhHHHHHHHhcC
Confidence            3678999999999999 89999999988877777766643


Done!