Your job contains 1 sequence.
>003954
MSFGSNSVGMGSRVVAEIFPHCHSMASGAIAQFPLSLSIKNAMDAGEMGLIGEQFDPSVV
GRIREEEFESRSGSDNVEGASGDDQEANEDGPPRKKKYHRHTPHQIQELESFFKECPHPD
EKQRSELSRRLGLESKQIKFWFQNRRTQMKTQMERHENIILRQEHDKLRAENEMLKDAMK
NPTCNNCGGPAVPGSVSNYELQQLRIENARLKDELGRICILANKFLGRPLTSSAGPISPQ
GVNSSLELGVGRNGFGGVANIPGSMMQTSLEFVEGPVMSLTMPHDRNMLIDLALTAMDEL
IKMAEADSPLWIKSLDGGRDVFNQEEYMRTFSPCIGMKPNGFVTEASRETGMVIINSSAL
IETMMDANRWAEMFPCMIARSATTDVLLSPSVTGTKNGALQVMVAEFQVLSPLVPVRQAK
FLRFCKQHIEGVWAVVDVSIDTNREGLSADPFQTYRRLPSGFVVQDVPNNYSKVTWIEHA
EYDESIVHHLCRPLLSSGMGFGAPKWVATLQRQCECLAVLMSSTITVQDQSGISPIGRKS
MLKLAQRMTYNFCSGVCASSVRKWDKLCVGNVGEDVRVLTRKNVNDPGEPPGVVLCAATT
VWLPMTRQRLFDFMRDERMRSEWDILSNGGPLQEMVHIAKGQAPGNCASLLRAGAMNVND
SGMLILQETWNDSSGSLVVYAPVDVPSMSMVMNGGDSTCVALLPSGFAILPDGYFGHGGL
INSNGTMVKTEGSSNESGGCLLTVGFQILVNSLPTAKLTVESVETVNNLISCTIQKIKAA
VLET
The BLAST search returned 2 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 003954
(784 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2127008 - symbol:ANL2 "ANTHOCYANINLESS 2" spec... 2367 1.1e-245 1
TAIR|locus:2098866 - symbol:HDG1 "AT3G61150" species:3702... 2215 1.4e-229 1
TAIR|locus:2135368 - symbol:PDF2 "AT4G04890" species:3702... 1947 3.5e-201 1
TAIR|locus:2119048 - symbol:ATML1 "AT4G21750" species:370... 1881 3.5e-194 1
TAIR|locus:2145116 - symbol:HDG7 "AT5G52170" species:3702... 1309 4.8e-194 2
TAIR|locus:2206880 - symbol:HDG11 "AT1G73360" species:370... 1492 5.8e-153 1
TAIR|locus:2030913 - symbol:HDG12 "homeodomain GLABROUS 1... 1332 2.5e-149 2
TAIR|locus:2207235 - symbol:HDG2 "AT1G05230" species:3702... 1285 5.0e-131 1
TAIR|locus:2131814 - symbol:FWA "AT4G25530" species:3702 ... 950 2.1e-124 2
TAIR|locus:2129396 - symbol:HDG4 "AT4G17710" species:3702... 783 3.5e-107 2
TAIR|locus:2097770 - symbol:HDG8 "AT3G03260" species:3702... 1029 6.7e-104 1
TAIR|locus:2167230 - symbol:HDG9 "AT5G17320" species:3702... 924 9.0e-93 1
TAIR|locus:2062540 - symbol:HDG3 "AT2G32370" species:3702... 900 2.1e-92 2
TAIR|locus:2023932 - symbol:HDG10 "AT1G34650" species:370... 792 8.7e-79 1
TAIR|locus:2182850 - symbol:AT5G07260 "AT5G07260" species... 354 3.7e-35 2
TAIR|locus:2116442 - symbol:AT4G26920 "AT4G26920" species... 193 4.2e-23 2
TAIR|locus:2034086 - symbol:ATHB-15 "AT1G52150" species:3... 148 2.3e-15 3
TAIR|locus:2134088 - symbol:HB-8 "AT4G32880" species:3702... 151 1.1e-14 3
TAIR|locus:2061544 - symbol:PHB "AT2G34710" species:3702 ... 154 1.2e-14 3
TAIR|locus:2028140 - symbol:PHV "AT1G30490" species:3702 ... 158 1.3e-14 3
TAIR|locus:2175856 - symbol:REV "AT5G60690" species:3702 ... 144 9.9e-13 4
UNIPROTKB|G3V2N3 - symbol:PRRX1 "Paired mesoderm homeobox... 150 1.6e-09 1
TAIR|locus:2202795 - symbol:AtHB23 "homeobox protein 23" ... 163 2.3e-09 1
TAIR|locus:2040520 - symbol:HB22 "homeobox protein 22" sp... 146 4.4e-09 1
UNIPROTKB|J9P9S0 - symbol:PRRX1 "Uncharacterized protein"... 153 7.0e-09 1
UNIPROTKB|Q643W9 - symbol:Prrx1 "Paired mesoderm homeobox... 153 7.0e-09 1
UNIPROTKB|H0YJ32 - symbol:SHOX2 "Short stature homeobox p... 143 9.2e-09 1
UNIPROTKB|A2VE85 - symbol:PRRX1 "Paired related homeobox ... 154 2.2e-08 1
UNIPROTKB|E2RGD6 - symbol:PRRX1 "Uncharacterized protein"... 154 2.2e-08 1
MGI|MGI:97712 - symbol:Prrx1 "paired related homeobox 1" ... 154 2.2e-08 1
RGD|628884 - symbol:Prrx1 "paired related homeobox 1" spe... 154 2.2e-08 1
ZFIN|ZDB-GENE-030131-9033 - symbol:prrx1b "paired related... 152 3.8e-08 1
UNIPROTKB|P54821 - symbol:PRRX1 "Paired mesoderm homeobox... 151 5.1e-08 1
UNIPROTKB|F1RUB4 - symbol:RHOXF1 "Uncharacterized protein... 134 8.4e-08 1
TAIR|locus:2205075 - symbol:ATHB13 species:3702 "Arabidop... 152 8.7e-08 1
TAIR|locus:2144578 - symbol:HB51 "homeobox 51" species:37... 148 9.1e-08 1
UNIPROTKB|G3X7M1 - symbol:SHOX "Uncharacterized protein" ... 152 9.9e-08 1
UNIPROTKB|H0YLI9 - symbol:SHOX "Short stature homeobox pr... 146 1.2e-07 1
ZFIN|ZDB-GENE-051030-21 - symbol:shox "short stature home... 151 1.3e-07 1
FB|FBgn0025334 - symbol:PHDP "Putative homeodomain protei... 144 1.7e-07 1
UNIPROTKB|F1Q361 - symbol:SHOX "Uncharacterized protein" ... 149 1.9e-07 1
UNIPROTKB|F1SHT7 - symbol:HOXA11 "Uncharacterized protein... 149 2.4e-07 1
UNIPROTKB|Q8N693 - symbol:ESX1 "Homeobox protein ESX1" sp... 151 2.6e-07 1
UNIPROTKB|F1NYF2 - symbol:NKX6-2 "Uncharacterized protein... 129 2.9e-07 1
UNIPROTKB|K7GS77 - symbol:LOC100520816 "Uncharacterized p... 147 3.1e-07 1
TAIR|locus:2062754 - symbol:HB-7 "homeobox 7" species:370... 145 3.4e-07 1
UNIPROTKB|F1SG33 - symbol:LOC100520816 "Uncharacterized p... 147 3.4e-07 1
UNIPROTKB|H0YMR3 - symbol:SHOX "Short stature homeobox pr... 146 3.5e-07 1
MGI|MGI:98218 - symbol:Prrx2 "paired related homeobox 2" ... 144 3.7e-07 1
RGD|3674 - symbol:Shox2 "short stature homeobox 2" specie... 143 3.9e-07 1
UNIPROTKB|O35750 - symbol:Shox2 "Short stature homeobox p... 143 3.9e-07 1
TAIR|locus:2055028 - symbol:HB4 "homeobox-leucine zipper ... 147 4.0e-07 1
UNIPROTKB|O15266 - symbol:SHOX "Short stature homeobox pr... 146 4.1e-07 1
WB|WBGene00000439 - symbol:ceh-16 species:6239 "Caenorhab... 134 4.2e-07 1
UNIPROTKB|G1K361 - symbol:PRRX1 "Paired mesoderm homeobox... 140 4.6e-07 1
UNIPROTKB|E1C1I8 - symbol:LOC100858967 "Uncharacterized p... 138 4.7e-07 1
UNIPROTKB|F1RSD4 - symbol:PRRX1 "Uncharacterized protein"... 127 4.7e-07 1
RGD|620371 - symbol:Rax "retina and anterior neural fold ... 147 4.9e-07 1
UNIPROTKB|Q9JLT7 - symbol:Rax "Retinal homeobox protein R... 147 4.9e-07 1
RGD|1311471 - symbol:Prrx2 "paired related homeobox 2" sp... 143 5.0e-07 1
UNIPROTKB|G3MZU0 - symbol:GSC2 "Uncharacterized protein" ... 126 6.0e-07 1
UNIPROTKB|J9NW39 - symbol:ARX "Uncharacterized protein" s... 149 6.7e-07 1
UNIPROTKB|E2QVR4 - symbol:ARX "Uncharacterized protein" s... 149 7.6e-07 1
RGD|2320224 - symbol:LOC100364841 "rCG53272-like" species... 125 7.7e-07 1
UNIPROTKB|F6XTT5 - symbol:ARX "Uncharacterized protein" s... 149 7.8e-07 1
UNIPROTKB|F1NFE6 - symbol:SHOX "Uncharacterized protein" ... 139 7.9e-07 1
MGI|MGI:109632 - symbol:Rax "retina and anterior neural f... 145 8.1e-07 1
FB|FBgn0000061 - symbol:al "aristaless" species:7227 "Dro... 146 9.2e-07 1
TAIR|locus:2103396 - symbol:HAT3 "homeobox-leucine zipper... 145 9.6e-07 2
UNIPROTKB|F1P4U7 - symbol:HOXD11 "Homeobox protein Hox-D1... 124 9.9e-07 1
UNIPROTKB|G3V2N9 - symbol:NOBOX "Homeobox protein NOBOX" ... 124 9.9e-07 1
UNIPROTKB|G1K2Z3 - symbol:PRRX1 "Paired mesoderm homeobox... 140 1.1e-06 1
UNIPROTKB|Q05437 - symbol:PRRX1 "Paired mesoderm homeobox... 140 1.1e-06 1
UNIPROTKB|I3LRI8 - symbol:I3LRI8 "Uncharacterized protein... 146 1.1e-06 1
UNIPROTKB|I3L828 - symbol:SHOX2 "Uncharacterized protein"... 143 1.2e-06 1
TAIR|locus:2041283 - symbol:HB6 "homeobox protein 6" spec... 135 1.2e-06 2
UNIPROTKB|Q99811 - symbol:PRRX2 "Paired mesoderm homeobox... 140 1.2e-06 1
UNIPROTKB|Q9GMA3 - symbol:VSX1 "Visual system homeobox 1"... 144 1.2e-06 1
UNIPROTKB|E1BLB9 - symbol:E1BLB9 "Uncharacterized protein... 143 1.3e-06 1
UNIPROTKB|O60902 - symbol:SHOX2 "Short stature homeobox p... 143 1.3e-06 1
TAIR|locus:2154724 - symbol:HB52 "homeobox protein 52" sp... 123 1.3e-06 1
UNIPROTKB|Q9NZR4 - symbol:VSX1 "Visual system homeobox 1"... 143 1.6e-06 1
TAIR|locus:2049614 - symbol:HB17 "homeobox-leucine zipper... 140 1.6e-06 1
WB|WBGene00003377 - symbol:mls-2 species:6239 "Caenorhabd... 142 1.7e-06 1
ZFIN|ZDB-GENE-020905-5 - symbol:prrx1a "paired related ho... 138 1.8e-06 1
UNIPROTKB|F1P4U9 - symbol:HOXD8 "Homeobox protein Hox-D8"... 121 2.1e-06 1
UNIPROTKB|J9NTV3 - symbol:GSC2 "Uncharacterized protein" ... 121 2.1e-06 1
MGI|MGI:1201673 - symbol:Shox2 "short stature homeobox 2"... 141 2.1e-06 1
UNIPROTKB|A6NLG4 - symbol:SHOX2 "cDNA FLJ38019 fis, clone... 131 2.1e-06 1
FB|FBgn0020617 - symbol:Rx "Retinal Homeobox" species:722... 147 2.3e-06 1
UNIPROTKB|Q9PVX0 - symbol:RX2 "Retinal homeobox protein R... 140 2.4e-06 1
UNIPROTKB|Q96QS3 - symbol:ARX "Homeobox protein ARX" spec... 144 2.6e-06 1
MGI|MGI:1097716 - symbol:Arx "aristaless related homeobox... 144 2.6e-06 1
RGD|1562672 - symbol:Arx "aristaless related homeobox" sp... 144 2.6e-06 1
UNIPROTKB|D4A5S8 - symbol:Arx "Homeobox protein ARX" spec... 144 2.6e-06 1
UNIPROTKB|F1LQW2 - symbol:Arx "Homeobox protein ARX" spec... 144 2.6e-06 1
FB|FBgn0051481 - symbol:pb "proboscipedia" species:7227 "... 143 2.9e-06 3
ZFIN|ZDB-GENE-990415-4 - symbol:hoxa11b "homeo box A11b" ... 138 3.0e-06 1
ZFIN|ZDB-GENE-010108-1 - symbol:vox "ventral homeobox" sp... 137 3.2e-06 1
UNIPROTKB|F6Y4K5 - symbol:SHOX2 "Uncharacterized protein"... 139 3.2e-06 1
WARNING: Descriptions of 367 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2127008 [details] [associations]
symbol:ANL2 "ANTHOCYANINLESS 2" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM;IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0043481 "anthocyanin accumulation in tissues in
response to UV light" evidence=IMP] [GO:0048364 "root development"
evidence=IMP] [GO:0048765 "root hair cell differentiation"
evidence=IMP] [GO:0006473 "protein acetylation" evidence=RCA]
[GO:0042335 "cuticle development" evidence=IMP] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 INTERPRO:IPR002913 GO:GO:0005634
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 GO:GO:0043481 GO:GO:0042335 Gene3D:1.10.10.60
SUPFAM:SSF46689 Pfam:PF01852 SMART:SM00234 PROSITE:PS50848
EMBL:AF058919 EMBL:AL161472 EMBL:U85254 EMBL:AF077335 EMBL:AK226968
IPI:IPI00538459 PIR:T01237 RefSeq:NP_567183.2 UniGene:At.24442
ProteinModelPortal:Q0WV12 SMR:Q0WV12 STRING:Q0WV12 PaxDb:Q0WV12
PRIDE:Q0WV12 EnsemblPlants:AT4G00730.1 GeneID:828022
KEGG:ath:AT4G00730 TAIR:At4g00730 eggNOG:euNOG18333
HOGENOM:HOG000243256 InParanoid:Q0WV12 OMA:MAGTING PhylomeDB:Q0WV12
ProtClustDB:CLSN2685237 Genevestigator:Q0WV12 GO:GO:0048765
Uniprot:Q0WV12
Length = 802
Score = 2367 (838.3 bits), Expect = 1.1e-245, P = 1.1e-245
Identities = 479/732 (65%), Positives = 558/732 (76%)
Query: 52 GEQFDPSVVGRIREEEFESRSGSDNVEGASGDDQEANEDGPPRKKKYHRHTPHQIQELES 111
G+ FD SV R REEE ESRSGSDNVEG SG+DQ+A D PPRKK+YHRHTP QIQELES
Sbjct: 93 GDTFDGSVNRRSREEEHESRSGSDNVEGISGEDQDA-ADKPPRKKRYHRHTPQQIQELES 151
Query: 112 FFKECPHPDEKQRSELSRRLGLESKQIKFWFQNRRTQMKTQMERHENIILRQEHDKLRAE 171
FKECPHPDEKQR ELS+RL LE++Q+KFWFQNRRTQMKTQ+ERHEN +LRQE+DKLRAE
Sbjct: 152 MFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQLERHENALLRQENDKLRAE 211
Query: 172 NEMLKDAMKNPTCNNCGGPAVPGSVSNYELQQLRIENARLKDELGRICILANKFLGRPLT 231
N +++AM+NP C NCGGPA+ G VS E LRIENARLKDEL R+C L KFLG
Sbjct: 212 NMSIREAMRNPICTNCGGPAMLGDVS-LEEHHLRIENARLKDELDRVCNLTGKFLGHHHN 270
Query: 232 SSAGPISPQGVNSSLELGVGRNGFGGVANIPGSMMQTS--LEFVEGPVMSLTMPHDRNML 289
NSSLEL VG N GG P L + + +++L
Sbjct: 271 HH--------YNSSLELAVGTNNNGGHFAFPPDFGGGGGCLPPQQQQSTVINGIDQKSVL 322
Query: 290 IDLALTAMDELIKMAEADSPLWIKSLDGGRDVFNQEEYMRTFSPCIGMKPNGFVTEASRE 349
++LALTAMDEL+K+A+++ PLW+KSLDG RD NQ+EYMRTFS KP G TEASR
Sbjct: 323 LELALTAMDELVKLAQSEEPLWVKSLDGERDELNQDEYMRTFS---STKPTGLATEASRT 379
Query: 350 TGMVIINSSALIETMMDANRWAEMFPCMIARSATTDVLLSPSVTGTKNGALQVMVAEFQV 409
+GMVIINS AL+ET+MD+NRW EMFPC +AR+ TTDV+ S + GT NGALQ+M AE QV
Sbjct: 380 SGMVIINSLALVETLMDSNRWTEMFPCNVARATTTDVI-SGGMAGTINGALQLMNAELQV 438
Query: 410 LSPLVPVRQAKFLRFCKQHIEGVWAVVDVSIDTNREGLSADPFQTYRRLPSGFVVQDVPN 469
LSPLVPVR FLRFCKQH EGVWAVVDVSID RE P RRLPSG VVQDV N
Sbjct: 439 LSPLVPVRNVNFLRFCKQHAEGVWAVVDVSIDPVRENSGGAP--VIRRLPSGCVVQDVSN 496
Query: 470 NYSKVTWIEHAEYDESIVHHLCRPLLSSGMGFGAPKWVATLQRQCECLAVLMSSTITVQD 529
YSKVTW+EHAEYDE+ +H L RPLL SG+GFG+ +W+ATLQRQCECLA+L+SS++T D
Sbjct: 497 GYSKVTWVEHAEYDENQIHQLYRPLLRSGLGFGSQRWLATLQRQCECLAILISSSVTSHD 556
Query: 530 QSGISPIGRKSMLKLAQRMTYNFCSGVCASSVRKWDKLCVGNVGEDVRVLTRKNVNDPGE 589
+ I+P GRKSMLKLAQRMT+NFCSG+ A SV W KL VGNV DVRV+TRK+V+DPGE
Sbjct: 557 NTSITPGGRKSMLKLAQRMTFNFCSGISAPSVHNWSKLTVGNVDPDVRVMTRKSVDDPGE 616
Query: 590 PPGVVLCAATTVWLPMTRQRLFDFMRDERMRSEWDILSNGGPLQEMVHIAKGQAPGNCAS 649
PPG+VL AAT+VWLP QRL+DF+R+ERMR EWDILSNGGP+QEM HI KGQ G S
Sbjct: 617 PPGIVLSAATSVWLPAAPQRLYDFLRNERMRCEWDILSNGGPMQEMAHITKGQDQG--VS 674
Query: 650 LLRAGAMNVNDSGMLILQETWNDSSGSLVVYAPVDVPSMSMVMNGGDSTCVALLPSGFAI 709
LLR+ AMN N S MLILQET D+SG+LVVYAPVD+P+M +VMNGGDS+ VALLPSGFA+
Sbjct: 675 LLRSNAMNANQSSMLILQETCIDASGALVVYAPVDIPAMHVVMNGGDSSYVALLPSGFAV 734
Query: 710 LPDGYFGHGGLINSNGTMVKTEGSSNESGGCLLTVGFQILVNSLPTAKLTVESVETVNNL 769
LPDG GG + +G + G GG LLTV FQILVN+LPTAKLTVESVETVNNL
Sbjct: 735 LPDGGIDGGG--SGDGDQ-RPVG-----GGSLLTVAFQILVNNLPTAKLTVESVETVNNL 786
Query: 770 ISCTIQKIKAAV 781
ISCT+QKI+AA+
Sbjct: 787 ISCTVQKIRAAL 798
>TAIR|locus:2098866 [details] [associations]
symbol:HDG1 "AT3G61150" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;IEA;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0006473 "protein acetylation" evidence=RCA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
INTERPRO:IPR002913 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 EMBL:AL137898 Pfam:PF01852
SMART:SM00234 PROSITE:PS50848 HOGENOM:HOG000243256
ProtClustDB:CLSN2685237 KO:K09338 EMBL:AJ224338 EMBL:AY050866
EMBL:AY096757 IPI:IPI00541112 PIR:T47907 RefSeq:NP_191674.1
UniGene:At.21209 HSSP:Q8C172 ProteinModelPortal:Q9M2E8 SMR:Q9M2E8
IntAct:Q9M2E8 PaxDb:Q9M2E8 PRIDE:Q9M2E8 EnsemblPlants:AT3G61150.1
GeneID:825287 KEGG:ath:AT3G61150 TAIR:At3g61150 eggNOG:NOG267226
InParanoid:Q9M2E8 OMA:HTEYDEN PhylomeDB:Q9M2E8
Genevestigator:Q9M2E8 Uniprot:Q9M2E8
Length = 808
Score = 2215 (784.8 bits), Expect = 1.4e-229, P = 1.4e-229
Identities = 465/785 (59%), Positives = 567/785 (72%)
Query: 25 MASGAIA---QFPLSLS-IKNAMDA-GEMGLIGEQFDPSVVGRI-REEEFESRSGSDNVE 78
+ S AIA P S S + + GEM GE + +V + R E+ ESRS SDN E
Sbjct: 35 LGSAAIAPSQSLPFSSSGLSLGLQTNGEMSRNGEIMESNVSRKSSRGEDVESRSESDNAE 94
Query: 79 GASGDDQEANEDGPPRKKKYHRHTPHQIQELESFFKECPHPDEKQRSELSRRLGLESKQI 138
SGDD + ++ +KK+YHRHTP QIQ+LES FKEC HPDEKQR +LSRRL L+ +Q+
Sbjct: 95 AVSGDDLDTSDRPLKKKKRYHRHTPKQIQDLESVFKECAHPDEKQRLDLSRRLNLDPRQV 154
Query: 139 KFWFQNRRTQMKTQMERHENIILRQEHDKLRAENEMLKDAMKNPTCNNCGGPAVPGSVSN 198
KFWFQNRRTQMKTQ+ERHEN +LRQE+DKLRAEN +++AM+NP C NCGGPAV G +S
Sbjct: 155 KFWFQNRRTQMKTQIERHENALLRQENDKLRAENMSVREAMRNPMCGNCGGPAVIGEISM 214
Query: 199 YELQQLRIENARLKDELGRICILANKFLGRPLTSSAGPISPQGVNSSLELGVGRNGFGGV 258
E Q LRIEN+RLKDEL R+C L KFLGR S P +S+L LGVG G GG
Sbjct: 215 EE-QHLRIENSRLKDELDRVCALTGKFLGRSNGSHHIP------DSALVLGVGV-GSGG- 265
Query: 259 ANIPGS-------MMQTSLEFV------EGPVMSLT--MP------HDRNMLIDLALTAM 297
N+ G + Q S F G V ++ P R+ +DLAL AM
Sbjct: 266 CNVGGGFTLSSPLLPQASPRFEISNGTGSGLVATVNRQQPVSVSDFDQRSRYLDLALAAM 325
Query: 298 DELIKMAEADSPLWIKSLDGGRDVFNQEEYMRTFSPCIGMKPNGFVTEASRETGMVIINS 357
DEL+KMA+ PLW++S D G +V NQEEY +FS C+G K +GFV+EAS+E G VIINS
Sbjct: 326 DELVKMAQTREPLWVRSSDSGFEVLNQEEYDTSFSRCVGPKQDGFVSEASKEAGTVIINS 385
Query: 358 SALIETMMDANRWAEMFPCMIARSATTDVLLSPSVTGTKNGALQVMVAEFQVLSPLVPVR 417
AL+ET+MD+ RWAEMFP M++R++TT+++ S G +NGAL +M AE Q+LSPLVPVR
Sbjct: 386 LALVETLMDSERWAEMFPSMVSRTSTTEIISSGM--GGRNGALHLMHAELQLLSPLVPVR 443
Query: 418 QAKFLRFCKQHIEGVWAVVDVSIDTNREGLSADPFQTYRRLPSGFVVQDVPNNYSKVTWI 477
Q FLRFCKQH EGVWAVVDVSID+ REG S+ + RRLPSG +VQD+ N YSKVTWI
Sbjct: 444 QVSFLRFCKQHAEGVWAVVDVSIDSIREGSSS----SCRRLPSGCLVQDMANGYSKVTWI 499
Query: 478 EHAEYDESIVHHLCRPLLSSGMGFGAPKWVATLQRQCECLAVLMSSTI-TVQDQSGISPI 536
EH EYDE+ +H L RPLL G+ FGA +W+A LQRQCECL +LMSST+ T + S I+
Sbjct: 500 EHTEYDENHIHRLYRPLLRCGLAFGAHRWMAALQRQCECLTILMSSTVSTSTNPSPINCN 559
Query: 537 GRKSMLKLAQRMTYNFCSGVCASSVRKWDKLCVGNVGEDVRVLTRKNVNDPGEPPGVVLC 596
GRKSMLKLA+RMT NFC GVCASS++KW KL VGNV EDVR++TRK+VN+PGEPPG++L
Sbjct: 560 GRKSMLKLAKRMTDNFCGGVCASSLQKWSKLNVGNVDEDVRIMTRKSVNNPGEPPGIILN 619
Query: 597 AATTVWLPMTRQRLFDFMRDERMRSEWDILSNGGPLQEMVHIAKGQAPGNCASLLRAGAM 656
AAT+VW+P++ +RLFDF+ +ER+RSEWDILSNGGP++EM HIAKG N SLLRA A+
Sbjct: 620 AATSVWMPVSPRRLFDFLGNERLRSEWDILSNGGPMKEMAHIAKGHDRSNSVSLLRASAI 679
Query: 657 NVNDSGMLILQETWNDSSGSLVVYAPVDVPSMSMVMNGGDSTCVALLPSGFAILPDGYFG 716
N N S MLILQET D++G++VVYAPVD+P+M VMNGGDS VALLPSGFAILP+G G
Sbjct: 680 NANQSSMLILQETSIDAAGAVVVYAPVDIPAMQAVMNGGDSAYVALLPSGFAILPNGQAG 739
Query: 717 HGGLINSNGTMVKTEGSSNESGGCLLTVGFQILVNSLPTAKLTVESVETVNNLISCTIQK 776
+ G E GG LLTV FQILVNSLPTAKLTVESVETVNNLISCT+QK
Sbjct: 740 TQRCAAEERNSIGN-GGCMEEGGSLLTVAFQILVNSLPTAKLTVESVETVNNLISCTVQK 798
Query: 777 IKAAV 781
IKAA+
Sbjct: 799 IKAAL 803
>TAIR|locus:2135368 [details] [associations]
symbol:PDF2 "AT4G04890" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS;IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;IEA;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0009913 "epidermal cell differentiation"
evidence=IMP] [GO:0048825 "cotyledon development" evidence=IGI]
[GO:0006473 "protein acetylation" evidence=RCA] [GO:0009793 "embryo
development ending in seed dormancy" evidence=RCA] [GO:0010027
"thylakoid membrane organization" evidence=RCA] [GO:0010228
"vegetative to reproductive phase transition of meristem"
evidence=RCA] [GO:0016226 "iron-sulfur cluster assembly"
evidence=RCA] [GO:0048481 "ovule development" evidence=RCA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
INTERPRO:IPR002913 GO:GO:0005634 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0003677 EMBL:AL161502 GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689
Gene3D:3.30.530.20 InterPro:IPR023393 Pfam:PF01852 SMART:SM00234
PROSITE:PS50848 HOGENOM:HOG000243256 KO:K09338 HSSP:Q6B2C0
eggNOG:NOG261733 ProtClustDB:CLSN2681990 GO:GO:0048825
GO:GO:0009913 EMBL:AF128393 EMBL:AB056455 EMBL:AF424560
EMBL:AY062575 EMBL:BT000144 IPI:IPI00536198 PIR:E85061
RefSeq:NP_567274.1 UniGene:At.4047 ProteinModelPortal:Q93V99
SMR:Q93V99 IntAct:Q93V99 PaxDb:Q93V99 PRIDE:Q93V99
EnsemblPlants:AT4G04890.1 GeneID:825828 KEGG:ath:AT4G04890
TAIR:At4g04890 InParanoid:Q93V99 OMA:MIPARHM PhylomeDB:Q93V99
Genevestigator:Q93V99 Uniprot:Q93V99
Length = 743
Score = 1947 (690.4 bits), Expect = 3.5e-201, P = 3.5e-201
Identities = 393/728 (53%), Positives = 517/728 (71%)
Query: 56 DPSVVGRIREEEFESRSGSD-NVEGASGDDQEANEDGPPRKKKYHRHTPHQIQELESFFK 114
D + G RE++FE++SG++ E SG++ + P +KK+YHRHT QIQELESFFK
Sbjct: 24 DLGITGS-REDDFETKSGTEVTTENPSGEELQDPSQRPNKKKRYHRHTQRQIQELESFFK 82
Query: 115 ECPHPDEKQRSELSRRLGLESKQIKFWFQNRRTQMKTQMERHENIILRQEHDKLRAENEM 174
ECPHPD+KQR ELSR L LE Q+KFWFQN+RTQMK Q ERHEN IL+ ++DKLRAEN
Sbjct: 83 ECPHPDDKQRKELSRDLNLEPLQVKFWFQNKRTQMKAQSERHENQILKSDNDKLRAENNR 142
Query: 175 LKDAMKNPTCNNCGGPAVPGSVSNYELQQLRIENARLKDELGRICILANKFLGRPLTSSA 234
K+A+ N TC NCGGPA G +S ++ Q LRIENARL++E+ RI +A K++G+PL SS
Sbjct: 143 YKEALSNATCPNCGGPAAIGEMS-FDEQHLRIENARLREEIDRISAIAAKYVGKPLGSSF 201
Query: 235 GPISPQGVNSSLELGVGRNGFGGVANIPGSMMQTSLEFVEGPVMSLTMPHDRNMLIDLAL 294
P++ + SL+L VG FG G M T + + +S+ D+ ++++LA+
Sbjct: 202 APLAIHAPSRSLDLEVGN--FGNQTGFVGEMYGTG-DILRS--VSIPSETDKPIIVELAV 256
Query: 295 TAMDELIKMAEADSPLWIKSLDGGRDVFNQEEYMRTFSPCIGMKPNGFVTEASRETGMVI 354
AM+EL++MA+ PLW+ S D ++ N+EEY RTF IG KP G +EASR++ +VI
Sbjct: 257 AAMEELVRMAQTGDPLWL-STDNSVEILNEEEYFRTFPRGIGPKPLGLRSEASRQSAVVI 315
Query: 355 INSSALIETMMDANRWAEMFPCMIARSATTDVLLSPSVTGTKNGALQVMVAEFQVLSPLV 414
+N L+E +MD N+W+ +F +++R+ T +VL S V G NGALQVM AEFQV SPLV
Sbjct: 316 MNHINLVEILMDVNQWSCVFSGIVSRALTLEVL-STGVAGNYNGALQVMTAEFQVPSPLV 374
Query: 415 PVRQAKFLRFCKQHIEGVWAVVDVSIDTNREGLSADPFQTYRRLPSGFVVQDVPNNYSKV 474
P R+ F+R+CKQH +G WAVVDVS+D+ R + P RR PSG ++Q++PN YSKV
Sbjct: 375 PTRENYFVRYCKQHSDGSWAVVDVSLDSLRP---STPILRTRRRPSGCLIQELPNGYSKV 431
Query: 475 TWIEHAEYDESIVHHLCRPLLSSGMGFGAPKWVATLQRQCECLAVLMSSTITVQDQSGI- 533
TWIEH E D+ VH++ +PL+ SG+ FGA +WVATL+RQCE LA M+S I D S I
Sbjct: 432 TWIEHMEVDDRSVHNMYKPLVQSGLAFGAKRWVATLERQCERLASSMASNIP-GDLSVIT 490
Query: 534 SPIGRKSMLKLAQRMTYNFCSGVCASSVRKWDKLCVGNVGEDVRVLTRKNVNDPGEPPGV 593
SP GRKSMLKLA+RM +FCSGV AS+ W + +DVRV+TRK+++DPG PPG+
Sbjct: 491 SPEGRKSMLKLAERMVMSFCSGVGASTAHAWTTMSTTG-SDDVRVMTRKSMDDPGRPPGI 549
Query: 594 VLCAATTVWLPMTRQRLFDFMRDERMRSEWDILSNGGPLQEMVHIAKGQAPGNCASLLRA 653
VL AAT+ W+P+ +R+FDF+RDE R EWDILSNGG +QEM HIA G PGNC SLLR
Sbjct: 550 VLSAATSFWIPVAPKRVFDFLRDENSRKEWDILSNGGMVQEMAHIANGHEPGNCVSLLRV 609
Query: 654 GAMNVNDSGMLILQETWNDSSGSLVVYAPVDVPSMSMVMNGGDSTCVALLPSGFAILPDG 713
+ N + S MLILQE+ D+SGS V+YAPVD+ +M++V++GGD VALLPSGFAILPDG
Sbjct: 610 NSGNSSQSNMLILQESCTDASGSYVIYAPVDIVAMNVVLSGGDPDYVALLPSGFAILPDG 669
Query: 714 YFGHGGLINSNGTMVKTEGSSNESGGCLLTVGFQILVNSLPTAKLTVESVETVNNLISCT 773
G GG N + MV T SS GG LLTV FQILV+S+PTAKL++ SV TVN+LI CT
Sbjct: 670 SVG-GGDGNQHQEMVSTT-SSGSCGGSLLTVAFQILVDSVPTAKLSLGSVATVNSLIKCT 727
Query: 774 IQKIKAAV 781
+++IKAAV
Sbjct: 728 VERIKAAV 735
>TAIR|locus:2119048 [details] [associations]
symbol:ATML1 "AT4G21750" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;IEA;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA;IDA] [GO:0009913 "epidermal cell differentiation"
evidence=IGI] [GO:0048825 "cotyledon development" evidence=IGI]
[GO:0006473 "protein acetylation" evidence=RCA] [GO:0009793 "embryo
development ending in seed dormancy" evidence=RCA] [GO:0010027
"thylakoid membrane organization" evidence=RCA] [GO:0010075
"regulation of meristem growth" evidence=RCA] [GO:0010228
"vegetative to reproductive phase transition of meristem"
evidence=RCA] [GO:0016226 "iron-sulfur cluster assembly"
evidence=RCA] [GO:0048481 "ovule development" evidence=RCA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
INTERPRO:IPR002913 GO:GO:0005634 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:3.30.530.20
InterPro:IPR023393 Pfam:PF01852 SMART:SM00234 PROSITE:PS50848
HOGENOM:HOG000243256 EMBL:AL161555 HSSP:Q6B2C0 EMBL:U37589
EMBL:AL035527 EMBL:AY091104 EMBL:AY150491 EMBL:AK229970
IPI:IPI00535360 PIR:T05850 RefSeq:NP_001031692.1 RefSeq:NP_193906.2
UniGene:At.2706 ProteinModelPortal:Q8RWU4 SMR:Q8RWU4 STRING:Q8RWU4
PRIDE:Q8RWU4 EnsemblPlants:AT4G21750.1 EnsemblPlants:AT4G21750.2
GeneID:828263 KEGG:ath:AT4G21750 TAIR:At4g21750 eggNOG:NOG261733
InParanoid:Q8RWU4 OMA:HAWTTLS PhylomeDB:Q8RWU4
ProtClustDB:CLSN2681990 Genevestigator:Q8RWU4 GO:GO:0048825
GO:GO:0009913 Uniprot:Q8RWU4
Length = 762
Score = 1881 (667.2 bits), Expect = 3.5e-194, P = 3.5e-194
Identities = 392/746 (52%), Positives = 516/746 (69%)
Query: 56 DPSVVGRIREEEFESRSGSD-NVEGASGDDQEANEDGPPRKKKYHRHTPHQIQELESFFK 114
D + G EE+FE++SG++ +E ++ + P +KK+YHRHT QIQELESFFK
Sbjct: 24 DLGITGS-HEEDFETKSGAEVTMENPLEEELQDPNQRPNKKKRYHRHTQRQIQELESFFK 82
Query: 115 ECPHPDEKQRSELSRRLGLESKQIKFWFQNRRTQMKTQMERHENIILRQEHDKLRAENEM 174
ECPHPD+KQR ELSR L LE Q+KFWFQN+RTQMK Q ERHEN IL+ E+DKLRAEN
Sbjct: 83 ECPHPDDKQRKELSRELSLEPLQVKFWFQNKRTQMKAQHERHENQILKSENDKLRAENNR 142
Query: 175 LKDAMKNPTCNNCGGPAVPGSVSNYELQQLRIENARLKDELGRICILANKFLGRPL--TS 232
KDA+ N TC NCGGPA G +S ++ Q LRIENARL++E+ RI +A K++G+PL S
Sbjct: 143 YKDALSNATCPNCGGPAAIGEMS-FDEQHLRIENARLREEIDRISAIAAKYVGKPLMANS 201
Query: 233 SAGP--ISPQGVNS-SLELGVGR--NGFGGVANIPGSMMQTSLEFVEGPVMSLTMPHDRN 287
S+ P S + S SL+L VG N G M +S + + +S+ D+
Sbjct: 202 SSFPQLSSSHHIPSRSLDLEVGNFGNNNNSHTGFVGEMFGSS-DILRS--VSIPSEADKP 258
Query: 288 MLIDLALTAMDELIKMAEADSPLWIKSLDGGRDVFNQEEYMRTFSPCIGMKPNGFVTEAS 347
M+++LA+ AM+EL++MA+ PLW+ S D ++ N+EEY RTF IG KP G +EAS
Sbjct: 259 MIVELAVAAMEELVRMAQTGDPLWVSS-DNSVEILNEEEYFRTFPRGIGPKPIGLRSEAS 317
Query: 348 RETGMVIINSSALIETMMDANRWAEMFPCMIARSATTDVLLSPSVTGTKNGALQVMVAEF 407
RE+ +VI+N LIE +MD N+W+ +F +++R+ T +VL S V G NGALQVM AEF
Sbjct: 318 RESTVVIMNHINLIEILMDVNQWSSVFCGIVSRALTLEVL-STGVAGNYNGALQVMTAEF 376
Query: 408 QVLSPLVPVRQAKFLRFCKQHIEGVWAVVDVSIDTNREGLSADPFQTYRRLPSGFVVQDV 467
QV SPLVP R+ F+R+CKQH +G+WAVVDVS+D+ L P RR PSG ++Q++
Sbjct: 377 QVPSPLVPTRENYFVRYCKQHSDGIWAVVDVSLDS----LRPSPITRSRRRPSGCLIQEL 432
Query: 468 PNNYSKVTWIEHAEYDESIVHHLCRPLLSSGMGFGAPKWVATLQRQCECLAVLMSSTITV 527
N YSKVTW+EH E D+ VH++ +PL+++G+ FGA +WVATL RQCE LA M+S I
Sbjct: 433 QNGYSKVTWVEHIEVDDRSVHNMYKPLVNTGLAFGAKRWVATLDRQCERLASSMASNIPA 492
Query: 528 QDQSGI-SPIGRKSMLKLAQRMTYNFCSGVCASSVRKWDKLCVGNVGEDVRVLTRKNVND 586
D S I SP GRKSMLKLA+RM +FC+GV AS+ W L +DVRV+TRK+++D
Sbjct: 493 CDLSVITSPEGRKSMLKLAERMVMSFCTGVGASTAHAWTTLSTTG-SDDVRVMTRKSMDD 551
Query: 587 PGEPPGVVLCAATTVWLPMTRQRLFDFMRDERMRSEWDILSNGGPLQEMVHIAKGQAPGN 646
PG PPG+VL AAT+ W+P+ +R+FDF+RDE RSEWDILSNGG +QEM HIA G+ PGN
Sbjct: 552 PGRPPGIVLSAATSFWIPVAPKRVFDFLRDENSRSEWDILSNGGLVQEMAHIANGRDPGN 611
Query: 647 CASLLRAGAMNVNDSGMLILQETWNDSSGSLVVYAPVDVPSMSMVMNGGDSTCVALLPSG 706
SLLR + N S MLILQE+ D+SGS V+YAPVD+ +M++V++GGD VALLPSG
Sbjct: 612 SVSLLRVNSGNSGQSNMLILQESCTDASGSYVIYAPVDIIAMNVVLSGGDPDYVALLPSG 671
Query: 707 FAILPDGYF-GHGGLINSN-GTMVKTEGSSNE---------SGGCLLTVGFQILVNSLPT 755
FAILPDG G GG N++ G V+ G N GG LLTV FQILV+S+PT
Sbjct: 672 FAILPDGSARGGGGSANASAGAGVEGGGEGNNLEVVTTTGSCGGSLLTVAFQILVDSVPT 731
Query: 756 AKLTVESVETVNNLISCTIQKIKAAV 781
AKL++ SV TVN+LI CT+++IKAA+
Sbjct: 732 AKLSLGSVATVNSLIKCTVERIKAAL 757
>TAIR|locus:2145116 [details] [associations]
symbol:HDG7 "AT5G52170" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA;IDA] [GO:0006473 "protein acetylation" evidence=RCA]
InterPro:IPR001356 InterPro:IPR009057 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 INTERPRO:IPR002913 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689 Pfam:PF01852
SMART:SM00234 PROSITE:PS50848 eggNOG:euNOG18333
HOGENOM:HOG000243256 HSSP:Q6B2C0 EMBL:AB025603 IPI:IPI00525258
RefSeq:NP_200030.1 UniGene:At.55500 ProteinModelPortal:Q9LTK3
SMR:Q9LTK3 EnsemblPlants:AT5G52170.1 GeneID:835293
KEGG:ath:AT5G52170 TAIR:At5g52170 InParanoid:Q9LTK3
PhylomeDB:Q9LTK3 Genevestigator:Q9LTK3 Uniprot:Q9LTK3
Length = 682
Score = 1309 (465.8 bits), Expect = 4.8e-194, Sum P(2) = 4.8e-194
Identities = 255/435 (58%), Positives = 332/435 (76%)
Query: 347 SRETGMVIINSSALIETMMDANRWAEMFPCMIARSATTDVLLSPSVTGTKNGALQVMVAE 406
SRETG+V+INS AL+ET+MD N+WAEMF C++A ++T +V+ + S G++NG++ +M AE
Sbjct: 258 SRETGLVLINSLALVETLMDTNKWAEMFECIVAVASTLEVISNGS-DGSRNGSILLMQAE 316
Query: 407 FQVLSPLVPVRQAKFLRFCKQHIEGVWAVVDVSIDTNREGLSADPFQTYRRLPSGFVVQD 466
FQV+SPLVP++Q KFLR+CKQH +G+WAVVDVS D NR + + + PSG ++QD
Sbjct: 317 FQVMSPLVPIKQKKFLRYCKQHGDGLWAVVDVSYDINRGNENLKSYGGSKMFPSGCIIQD 376
Query: 467 VPNNYSKVTWIEHAEYDESIVHHLCRPLLSSGMGFGAPKWVATLQRQCECLAVLMSSTIT 526
+ N SKVTWIEH+EY+ES H L +PLLSS +G GA KW+ATLQRQCE +L+SS
Sbjct: 377 IGNGCSKVTWIEHSEYEESHTHSLYQPLLSSSVGLGATKWLATLQRQCESFTMLLSS--- 433
Query: 527 VQDQSGISPIGRKSMLKLAQRMTYNFCSGVCASSVRKWDKLCVGNVGEDVRVLTRKNVND 586
+D +G+S G KS+LKLAQRM NF SG+ AS + KW+KL NVG+D R+LTRK++
Sbjct: 434 -EDHTGLSHAGTKSILKLAQRMKLNFYSGITASCIHKWEKLLAENVGQDTRILTRKSL-- 490
Query: 587 PGEPPGVVLCAATTVWLPMTRQRLFDFMRDERMRSEWDILSNGGPLQEMVHIAKGQAPGN 646
EP G+VL AAT++WLP+T+QRLF+F+ D + R++WDILSNG ++ + + KGQ G+
Sbjct: 491 --EPSGIVLSAATSLWLPVTQQRLFEFLCDGKCRNQWDILSNGASMENTLLVPKGQQEGS 548
Query: 647 CASLLRAGAMNVNDSGMLILQETWNDSSGSLVVYAPVDVPSMSMVMNGGDSTCVALLPSG 706
C SLLRA + N+S MLILQETWND SG+LVVYAPVD+PSM+ VM+GGDS VALLPSG
Sbjct: 549 CVSLLRAAGNDQNESSMLILQETWNDVSGALVVYAPVDIPSMNTVMSGGDSAYVALLPSG 608
Query: 707 FAILPDGYFGHGGLINSNGTMVKTEGSSNESGGCLLTVGFQILVNSLPTAKLTVESVETV 766
F+ILPDG +++G +V + ES GCLLTVGFQILVNSLPTAKL VESVETV
Sbjct: 609 FSILPDGSSSSSDQFDTDGGLV-----NQESKGCLLTVGFQILVNSLPTAKLNVESVETV 663
Query: 767 NNLISCTIQKIKAAV 781
NNLI+CTI KI+AA+
Sbjct: 664 NNLIACTIHKIRAAL 678
Score = 593 (213.8 bits), Expect = 4.8e-194, Sum P(2) = 4.8e-194
Identities = 121/217 (55%), Positives = 157/217 (72%)
Query: 47 EMGLIGEQFDPSV-VGRIREEEFESRSGSDNVEGASGDDQEANEDGPPRKK---KYHRHT 102
E+ + F+PS +G+++++EFESRS SD+ A D++ E P +KK KYHRHT
Sbjct: 6 EVDMSRGDFNPSFFLGKLKDDEFESRSLSDDSFDAMSGDEDKQEQRPKKKKRKTKYHRHT 65
Query: 103 PHQIQELESFFKECPHPDEKQRSELSRRLGLESKQIKFWFQNRRTQMKTQMERHENIILR 162
+QIQELESFFKECPHP+EKQR EL ++L LESKQIKFWFQNRRTQMKTQ+ERHEN+IL+
Sbjct: 66 SYQIQELESFFKECPHPNEKQRLELGKKLTLESKQIKFWFQNRRTQMKTQLERHENVILK 125
Query: 163 QEHDKLRAENEMLKDAMKNPTCNNCGGPAVPGSVSNYELQQLRIENARLKDELGRICILA 222
QE++KLR EN LK++M+ C +CGG +PG VS +E QLRIENA+LK+EL RIC LA
Sbjct: 126 QENEKLRLENSFLKESMRGSLCIDCGGAVIPGEVS-FEQHQLRIENAKLKEELDRICALA 184
Query: 223 NKFLGRPLTSSAGPISPQGVNSSLELGVGRNGFGGVA 259
N+F+G + S P S G+ S L +G GG +
Sbjct: 185 NRFIGGSI-SLEQP-SNGGIGSQ-HLPIGHCVSGGTS 218
Score = 90 (36.7 bits), Expect = 7.1e-141, Sum P(2) = 7.1e-141
Identities = 56/224 (25%), Positives = 104/224 (46%)
Query: 114 KECPHPDEKQR-SELSRRLGLESKQIKFWFQN-RRTQMKTQMERHENIILRQEHDKLRAE 171
K+ P +K+R ++ R + ++++ +F+ K ++E + + L + K +
Sbjct: 47 KQEQRPKKKKRKTKYHRHTSYQIQELESFFKECPHPNEKQRLELGKKLTLESKQIKFWFQ 106
Query: 172 NEMLKDAMKNPTCNNCGGPAVPGSVSNYELQQLRIENARLKDEL-GRICI-LANKFLGRP 229
N + MK + + E ++LR+EN+ LK+ + G +CI +
Sbjct: 107 NR--RTQMKTQLERH------ENVILKQENEKLRLENSFLKESMRGSLCIDCGGAVIPGE 158
Query: 230 LTSSAGPISPQGVNSSLELGVGRNGFGGVAN--IPGSMMQTSLEFVE-GPVMSLTMP--H 284
++ + + N+ L+ + R +AN I GS+ SLE G + S +P H
Sbjct: 159 VSFEQHQLRIE--NAKLKEELDR--ICALANRFIGGSI---SLEQPSNGGIGSQHLPIGH 211
Query: 285 DRN-----MLIDLALTAMDELIKMAEADSPLWI-KSLDGGRDVF 322
+ M +DLA+ AMDEL+K+AE ++ LW KS G + F
Sbjct: 212 CVSGGTSLMFMDLAMEAMDELLKLAELETSLWSSKSEKGSMNHF 255
>TAIR|locus:2206880 [details] [associations]
symbol:HDG11 "AT1G73360" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS;IDA] [GO:0005634 "nucleus"
evidence=ISM;IEA;ISS;IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;ISS] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0010091 "trichome branching"
evidence=IGI;IMP] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
INTERPRO:IPR002913 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:3.30.530.20
InterPro:IPR023393 Pfam:PF01852 SMART:SM00234 PROSITE:PS50848
HOGENOM:HOG000243256 GO:GO:0010091 HSSP:P02836 KO:K09338
EMBL:AC012396 EMBL:BT003979 EMBL:BT004915 IPI:IPI00520147
PIR:B96760 RefSeq:NP_177479.1 UniGene:At.34997
ProteinModelPortal:Q9FX31 SMR:Q9FX31 IntAct:Q9FX31 PaxDb:Q9FX31
PRIDE:Q9FX31 EnsemblPlants:AT1G73360.1 GeneID:843671
KEGG:ath:AT1G73360 TAIR:At1g73360 eggNOG:NOG70408 InParanoid:Q9FX31
OMA:MKLAQRM PhylomeDB:Q9FX31 ProtClustDB:CLSN2679864
Genevestigator:Q9FX31 Uniprot:Q9FX31
Length = 722
Score = 1492 (530.3 bits), Expect = 5.8e-153, P = 5.8e-153
Identities = 323/724 (44%), Positives = 457/724 (63%)
Query: 72 SGSDNVEGASGDDQEANEDGPPRKKKYHRHTPHQIQELESFFKECPHPDEKQRSELSRRL 131
SGS + G + +KK+YHRHT QIQ LES FKECPHPDEKQR++LSR L
Sbjct: 10 SGSGSGGDGGGSHHHDGSETDRKKKRYHRHTAQQIQRLESSFKECPHPDEKQRNQLSREL 69
Query: 132 GLESKQIKFWFQNRRTQMKTQMERHENIILRQEHDKLRAENEMLKDAMKNPTCNNCGGPA 191
GL +QIKFWFQNRRTQ+K Q ER +N L+ E+DK+R EN +++A+K+ C NCGGP
Sbjct: 70 GLAPRQIKFWFQNRRTQLKAQHERADNSALKAENDKIRCENIAIREALKHAICPNCGGPP 129
Query: 192 VPGSVSNYELQQLRIENARLKDELGRICILANKFLGRPLT--SSAGP--ISPQGVNSSLE 247
V ++ Q+LRIENA L++EL R+ +A+K++GRP++ S+ P ISP ++ +
Sbjct: 130 VSED-PYFDEQKLRIENAHLREELERMSTIASKYMGRPISQLSTLHPMHISPLDLSMTSL 188
Query: 248 LGVGRNGFGGVAN---IPGSMMQT--SLEFVEGPVMSLTMPHDRNMLIDLALTAMDELIK 302
G G G G + +PGS M + P ++++ D+ ++ +ALTAM+EL++
Sbjct: 189 TGCGPFGHGPSLDFDLLPGSSMAVGPNNNLQSQPNLAIS-DMDKPIMTGIALTAMEELLR 247
Query: 303 MAEADSPLWIKSLDGGRDVFNQEEYMRTFSPCIGMKPN-GFVTEASRETGMVIINSSALI 361
+ + + PLW ++ DG RD+ N Y F N F EASR +G+V +N+ AL+
Sbjct: 248 LLQTNEPLWTRT-DGCRDILNLGSYENVFPRSSNRGKNQNFRVEASRSSGIVFMNAMALV 306
Query: 362 ETMMDANRWAEMFPCMIARSATTDVLLSPSVTGTKNGALQVMVAEFQVLSPLVPVRQAKF 421
+ MD +W E+FP +IA S T V+ S + GT GAL ++ E +VLSPLV R+
Sbjct: 307 DMFMDCVKWTELFPSIIAASKTLAVI-SSGMGGTHEGALHLLYEEMEVLSPLVATREFCE 365
Query: 422 LRFCKQHIEGVWAVVDVSIDTNREGLSADPFQTYRRLPSGFVVQDVPNNYSKVTWIEHAE 481
LR+C+Q +G W VV+VS D + Q+YR PSG ++QD+PN YSKVTW+EH E
Sbjct: 366 LRYCQQTEQGSWIVVNVSYDLPQ---FVSHSQSYR-FPSGCLIQDMPNGYSKVTWVEHIE 421
Query: 482 YDES-IVHHLCRPLLSSGMGFGAPKWVATLQRQCECLAVLMSSTITVQDQSGI--SPIGR 538
+E +VH L R ++ G+ FGA +WV TLQR CE A L + +D G+ SP G+
Sbjct: 422 TEEKELVHELYREIIHRGIAFGADRWVTTLQRMCERFASLSVPASSSRDLGGVILSPEGK 481
Query: 539 KSMLKLAQRMTYNFCSGVCASSVRKWDKLCVGNVGE-DVRVLTRKNVNDPGEPPGVVLCA 597
+SM++LAQRM N+C V S+ + V + E +RV K+ P EP G VLCA
Sbjct: 482 RSMMRLAQRMISNYCLSVSRSNNTR--STVVSELNEVGIRVTAHKS---P-EPNGTVLCA 535
Query: 598 ATTVWLPMTRQRLFDFMRDERMRSEWDILSNGGPLQEMVHIAKGQAPGNCASLLRAGAMN 657
ATT WLP + Q +F+F++DER R +WD+LSNG +QE+ HI+ G PGNC S+LR G+
Sbjct: 536 ATTFWLPNSPQNVFNFLKDERTRPQWDVLSNGNAVQEVAHISNGSHPGNCISVLR-GSNA 594
Query: 658 VNDSGMLILQETWNDSSGSLVVYAPVDVPSMSMVMNGGDSTCVALLPSGFAILPDGYFGH 717
+ + MLILQE+ DSSG+ VVY+PVD+ ++++ M+G D + + LL SGF I PDG
Sbjct: 595 THSNNMLILQESSTDSSGAFVVYSPVDLAALNIAMSGEDPSYIPLLSSGFTISPDG---- 650
Query: 718 GGLINSNGTMVKTEGSSNESGGCLLTVGFQILVNSLPTAKLTVESVETVNNLISCTIQKI 777
G + G + G ++ SG L+TVGFQI+V++LPTAKL +ESVETVNNLI T+ +I
Sbjct: 651 NGSNSEQGGASTSSGRASASGS-LITVGFQIMVSNLPTAKLNMESVETVNNLIGTTVHQI 709
Query: 778 KAAV 781
K A+
Sbjct: 710 KTAL 713
>TAIR|locus:2030913 [details] [associations]
symbol:HDG12 "homeodomain GLABROUS 12" species:3702
"Arabidopsis thaliana" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM;IEA;ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0010091 "trichome
branching" evidence=IGI] [GO:0000724 "double-strand break repair
via homologous recombination" evidence=RCA] [GO:0031507
"heterochromatin assembly" evidence=RCA] [GO:0045787 "positive
regulation of cell cycle" evidence=RCA] [GO:0048451 "petal
formation" evidence=RCA] [GO:0048453 "sepal formation"
evidence=RCA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 INTERPRO:IPR002913 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 EMBL:AC034106 Gene3D:1.10.10.60 SUPFAM:SSF46689
Gene3D:3.30.530.20 InterPro:IPR023393 Pfam:PF01852 SMART:SM00234
PROSITE:PS50848 HOGENOM:HOG000243256 GO:GO:0010091 HSSP:P02836
KO:K09338 eggNOG:NOG70408 ProtClustDB:CLSN2679864 EMBL:AF424554
EMBL:BT001050 IPI:IPI00531481 PIR:D86314 RefSeq:NP_564041.2
UniGene:At.15827 ProteinModelPortal:Q9LMT8 SMR:Q9LMT8 PaxDb:Q9LMT8
PRIDE:Q9LMT8 EnsemblPlants:AT1G17920.1 GeneID:838371
KEGG:ath:AT1G17920 TAIR:At1g17920 InParanoid:Q9LMT8 OMA:CENIAMQ
PhylomeDB:Q9LMT8 Genevestigator:Q9LMT8 Uniprot:Q9LMT8
Length = 687
Score = 1332 (473.9 bits), Expect = 2.5e-149, Sum P(2) = 2.5e-149
Identities = 282/657 (42%), Positives = 417/657 (63%)
Query: 84 DQEANEDGPPRKKKYHRHTPHQIQELESFFKECPHPDEKQRSELSRRLGLESKQIKFWFQ 143
D E +KK++HRHTPHQIQ LES F EC HPDEKQR++LSR LGL +QIKFWFQ
Sbjct: 11 DSSETEKKNKKKKRFHRHTPHQIQRLESTFNECQHPDEKQRNQLSRELGLAPRQIKFWFQ 70
Query: 144 NRRTQMKTQMERHENIILRQEHDKLRAENEMLKDAMKNPTCNNCGGPAVPGSVSNYELQQ 203
NRRTQ K Q ER +N L++E+DK+R EN +++A+K+ C +CG V S ++ Q+
Sbjct: 71 NRRTQKKAQHERADNCALKEENDKIRCENIAIREAIKHAICPSCGDSPV-NEDSYFDEQK 129
Query: 204 LRIENARLKDELGRICILANKFLGRPLTSSAGPISPQGVNSSLEL-GVGRNGFGGVANIP 262
LRIENA+L+DEL R+ +A KFLGRP++ ++P V S LEL G + + +P
Sbjct: 130 LRIENAQLRDELERVSSIAAKFLGRPISHLPPLLNPMHV-SPLELFHTGPSLDFDL--LP 186
Query: 263 GSMMQTSLEFVEGPVMSLTMPHDRNMLIDLALTAMDELIKMAEADSPLWIKSLDGGRDVF 322
GS S+ + + D++++ ++A+TAM+EL+++ + + PLWIK+ DG RDV
Sbjct: 187 GSCSSMSVPSLPSQPNLVLSEMDKSLMTNIAVTAMEELLRLLQTNEPLWIKT-DGCRDVL 245
Query: 323 NQEEY--MRTFSPCIGMKPNGFVTEASRETGMVIINSSALIETMMDANRWAEMFPCMIAR 380
N E Y M T S G K N EASR +G+V N+ L++ +M++ + E+FP ++A
Sbjct: 246 NLENYENMFTRSSTSGGKKNNLGMEASRSSGVVFTNAITLVDMLMNSVKLTELFPSIVAS 305
Query: 381 SATTDVLLSPSVTGTKNGALQVMVAEFQVLSPLVPVRQAKFLRFCKQHIEGVWAVVDVSI 440
S T V+ S + G AL +M+ E QVLSPLV R+ LR+C+Q G WA+V+VS
Sbjct: 306 SKTLAVI-SSGLRGNHGDALHLMIEELQVLSPLVTTREFCVLRYCQQIEHGTWAIVNVSY 364
Query: 441 DTNREGLSADPFQTYRRLPSGFVVQDVPNNYSKVTWIEHAEYDESI-VHHLCRPLLSSGM 499
+ + +S ++YR PSG ++QD+ N YSKVTW+EH E++E +H + + ++ G+
Sbjct: 365 EFP-QFISQS--RSYR-FPSGCLIQDMSNGYSKVTWVEHGEFEEQEPIHEMFKDIVHKGL 420
Query: 500 GFGAPKWVATLQRQCECLAVLMSSTITVQDQSGI--SPIGRKSMLKLAQRMTYNFCSGVC 557
FGA +W+ATLQR CE L+ + D G+ SP G++S+++LA RM NFC V
Sbjct: 421 AFGAERWIATLQRMCERFTNLLEPATSSLDLGGVIPSPEGKRSIMRLAHRMVSNFCLSVG 480
Query: 558 ASSVRKWDKLCVGNVGE-DVRVLTRKNVNDPGEPPGVVLCAATTVWLPMTRQRLFDFMRD 616
S+ + V + E +RV + K+ + EP G+VLCAAT+ WLP++ Q +F+F++D
Sbjct: 481 TSNNTR--STVVSGLDEFGIRVTSHKSRH---EPNGMVLCAATSFWLPISPQNVFNFLKD 535
Query: 617 ERMRSEWDILSNGGPLQEMVHIAKGQAPGNCASLLRAGAMNVNDSGMLILQETWNDSSGS 676
ER R +WD+LSNG +QE+ HI G PGNC S+LR + + + MLILQE+ DSS +
Sbjct: 536 ERTRPQWDVLSNGNSVQEVAHITNGSNPGNCISVLRGFNASSSQNNMLILQESCIDSSSA 595
Query: 677 -LVVYAPVDVPSMSMVMNGGDSTCVALLPSGFAILPDGYFGHGGLINSNGTMVKTEG 732
LV+Y PVD+P++++ M+G D++ + +LPSGFAI PDG GG + + G + G
Sbjct: 596 ALVIYTPVDLPALNIAMSGQDTSYIPILPSGFAISPDGSSKGGGSLITVGFQIMVSG 652
Score = 147 (56.8 bits), Expect = 2.5e-149, Sum P(2) = 2.5e-149
Identities = 30/58 (51%), Positives = 43/58 (74%)
Query: 724 NGTMVKTEGSSNESGGCLLTVGFQILVNSLPTAKLTVESVETVNNLISCTIQKIKAAV 781
+G + +GSS + GG L+TVGFQI+V+ L AKL +ES+ETVNNLI+ T+ +IK +
Sbjct: 625 SGFAISPDGSS-KGGGSLITVGFQIMVSGLQPAKLNMESMETVNNLINTTVHQIKTTL 681
>TAIR|locus:2207235 [details] [associations]
symbol:HDG2 "AT1G05230" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;IEA;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0010090 "trichome morphogenesis" evidence=IMP]
[GO:0010103 "stomatal complex morphogenesis" evidence=RCA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
INTERPRO:IPR002913 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0005634 GO:GO:0010090 GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:3.30.530.20
InterPro:IPR023393 Pfam:PF01852 SMART:SM00234 PROSITE:PS50848
HOGENOM:HOG000243256 eggNOG:NOG261733 ProtClustDB:CLSN2681990
EMBL:AC000098 EMBL:AY037177 EMBL:AY091690 IPI:IPI00530516
PIR:G86186 RefSeq:NP_001184911.1 RefSeq:NP_172015.1
RefSeq:NP_849596.1 UniGene:At.19179 UniGene:At.50922
ProteinModelPortal:Q94C37 SMR:Q94C37 STRING:Q94C37 PaxDb:Q94C37
PRIDE:Q94C37 EnsemblPlants:AT1G05230.1 EnsemblPlants:AT1G05230.2
EnsemblPlants:AT1G05230.4 GeneID:839256 KEGG:ath:AT1G05230
TAIR:At1g05230 InParanoid:Q94C37 OMA:VGVITNQ PhylomeDB:Q94C37
Genevestigator:Q94C37 Uniprot:Q94C37
Length = 721
Score = 1285 (457.4 bits), Expect = 5.0e-131, P = 5.0e-131
Identities = 288/625 (46%), Positives = 400/625 (64%)
Query: 162 RQEHDKLRAENEMLK-DAMK-NPTCNNCGGPAVPGSVSNYELQQLRIENARLKDELGRIC 219
R E+ LRAENE L+ D ++ N P G + + ++ + +L+ E R+
Sbjct: 125 RHENSHLRAENEKLRNDNLRYREALANASCPNCGGPTA---IGEMSFDEHQLRLENARLR 181
Query: 220 ILANKFLGRPLTSSAGPISPQGVNSSLELGVGRNGFGGVANIPGSMMQTSLEFVEGPVMS 279
++ P+S + S L R + NI G + + + S
Sbjct: 182 EEIDRISAIAAKYVGKPVSNYPLMSPPPLPP-RPLELAMGNIGGEAYGNNPNDL---LKS 237
Query: 280 LTMP--HDRNMLIDLALTAMDELIKMAEADSPLWIKSLDGGRDVFNQEEYMRTFSPCIGM 337
+T P D+ ++IDL++ AM+EL++M + D PLW KSL V ++EEY RTF IG
Sbjct: 238 ITAPTESDKPVIIDLSVAAMEELMRMVQVDEPLW-KSL-----VLDEEEYARTFPRGIGP 291
Query: 338 KPNGFVTEASRETGMVIINSSALIETMMDANRWAEMFPCMIARSATTDVLLSPSVTGTKN 397
+P G+ +EASRE+ +VI+N ++E +MD N+W+ +F M++R+ T VL S V G N
Sbjct: 292 RPAGYRSEASRESAVVIMNHVNIVEILMDVNQWSTIFAGMVSRAMTLAVL-STGVAGNYN 350
Query: 398 GALQVMVAEFQVLSPLVPVRQAKFLRFCKQHIEGVWAVVDVSIDTNREGLSADPFQTYRR 457
GALQVM AEFQV SPLVP R+ F R+CKQ +G WAVVD+S+D+ L +P RR
Sbjct: 351 GALQVMSAEFQVPSPLVPTRETYFARYCKQQGDGSWAVVDISLDS----LQPNPPARCRR 406
Query: 458 LPSGFVVQDVPNNYSKVTWIEHAEYDESIVHHLCRPLLSSGMGFGAPKWVATLQRQCECL 517
SG ++Q++PN YSKVTW+EH E D+ VH+L + ++S+G FGA +WVA L RQCE L
Sbjct: 407 RASGCLIQELPNGYSKVTWVEHVEVDDRGVHNLYKHMVSTGHAFGAKRWVAILDRQCERL 466
Query: 518 AVLMSSTITVQDQSGIS-PIGRKSMLKLAQRMTYNFCSGVCASSVRKWDKLCVGNVGEDV 576
A +M++ I+ + I+ GR+SMLKLA+RM +FC+GV AS+ W L G EDV
Sbjct: 467 ASVMATNISSGEVGVITNQEGRRSMLKLAERMVISFCAGVSASTAHTWTTLS-GTGAEDV 525
Query: 577 RVLTRKNVNDPGEPPGVVLCAATTVWLPMTRQRLFDFMRDERMRSEWDILSNGGPLQEMV 636
RV+TRK+V+DPG PPG+VL AAT+ W+P+ +R+FDF+RDE R+EWDILSNGG +QEM
Sbjct: 526 RVMTRKSVDDPGRPPGIVLSAATSFWIPVPPKRVFDFLRDENSRNEWDILSNGGVVQEMA 585
Query: 637 HIAKGQAPGNCASLLRAGAMNVNDSGMLILQETWNDSSGSLVVYAPVDVPSMSMVMNGGD 696
HIA G+ GNC SLLR + N + S MLILQE+ D + S V+YAPVD+ +M++V+NGGD
Sbjct: 586 HIANGRDTGNCVSLLRVNSANSSQSNMLILQESCTDPTASFVIYAPVDIVAMNIVLNGGD 645
Query: 697 STCVALLPSGFAILPDGYFGHGGLINSNGTMVKTEGSSNESGGCLLTVGFQILVNSLPTA 756
VALLPSGFAILPDG N+N G+ GG LLTV FQILV+S+PTA
Sbjct: 646 PDYVALLPSGFAILPDG--------NANS------GAPGGDGGSLLTVAFQILVDSVPTA 691
Query: 757 KLTVESVETVNNLISCTIQKIKAAV 781
KL++ SV TVNNLI+CT+++IKA++
Sbjct: 692 KLSLGSVATVNNLIACTVERIKASM 716
Score = 733 (263.1 bits), Expect = 1.6e-72, P = 1.6e-72
Identities = 153/334 (45%), Positives = 224/334 (67%)
Query: 61 GRIREEEFES---RSGSDNVEGASGDDQEANEDGPPRKKKYHRHTPHQIQELESFFKECP 117
G +R++EF+S +SGS+N EG SG+DQ+ P +KK+YHRHT QIQE+E+FFKECP
Sbjct: 30 GFLRDDEFDSPNTKSGSENQEGGSGNDQDPLH--PNKKKRYHRHTQLQIQEMEAFFKECP 87
Query: 118 HPDEKQRSELSRRLGLESKQIKFWFQNRRTQMKTQMERHENIILRQEHDKLRAENEMLKD 177
HPD+KQR +LSR L LE Q+KFWFQN+RTQMK ERHEN LR E++KLR +N ++
Sbjct: 88 HPDDKQRKQLSRELNLEPLQVKFWFQNKRTQMKNHHERHENSHLRAENEKLRNDNLRYRE 147
Query: 178 AMKNPTCNNCGGPAVPGSVSNYELQQLRIENARLKDELGRICILANKFLGRPLTS----S 233
A+ N +C NCGGP G +S ++ QLR+ENARL++E+ RI +A K++G+P+++ S
Sbjct: 148 ALANASCPNCGGPTAIGEMS-FDEHQLRLENARLREEIDRISAIAAKYVGKPVSNYPLMS 206
Query: 234 AGPISPQGVNSSLELGVGRNGFGGVANIPGSMMQTSLEFVEGPVMSLTMPHDRNMLIDLA 293
P+ P+ LEL +G G N P ++++ + P S D+ ++IDL+
Sbjct: 207 PPPLPPR----PLELAMGNIGGEAYGNNPNDLLKS----ITAPTES-----DKPVIIDLS 253
Query: 294 LTAMDELIKMAEADSPLWIKSLDGGRDVFNQEEYMRTFSPCIGMKPNGFVTEASRETGMV 353
+ AM+EL++M + D PLW KSL V ++EEY RTF IG +P G+ +EASRE+ +V
Sbjct: 254 VAAMEELMRMVQVDEPLW-KSL-----VLDEEEYARTFPRGIGPRPAGYRSEASRESAVV 307
Query: 354 IINSSALIETMMDANRWAEMFPCMIARSATTDVL 387
I+N ++E +MD N+W+ +F M++R+ T VL
Sbjct: 308 IMNHVNIVEILMDVNQWSTIFAGMVSRAMTLAVL 341
>TAIR|locus:2131814 [details] [associations]
symbol:FWA "AT4G25530" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;ISS;IDA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0006349 "regulation of gene expression by genetic
imprinting" evidence=IEP] [GO:0031047 "gene silencing by RNA"
evidence=IMP] [GO:0005515 "protein binding" evidence=IPI]
[GO:0009909 "regulation of flower development" evidence=IEP;RCA]
[GO:0042803 "protein homodimerization activity" evidence=IPI]
[GO:0007155 "cell adhesion" evidence=RCA] [GO:0010090 "trichome
morphogenesis" evidence=RCA] [GO:0045010 "actin nucleation"
evidence=RCA] [GO:0048573 "photoperiodism, flowering" evidence=RCA]
[GO:0048765 "root hair cell differentiation" evidence=RCA]
[GO:0071555 "cell wall organization" evidence=RCA] [GO:0009911
"positive regulation of flower development" evidence=IMP]
InterPro:IPR001356 InterPro:IPR009057 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 INTERPRO:IPR002913 GO:GO:0007275
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 EMBL:AL022197 EMBL:AL161563
Gene3D:1.10.10.60 SUPFAM:SSF46689 Pfam:PF01852 SMART:SM00234
PROSITE:PS50848 GO:GO:0009911 GO:GO:0031047 HOGENOM:HOG000243256
GO:GO:0006349 EMBL:AF178688 EMBL:AF243535 IPI:IPI00545721
PIR:A85295 RefSeq:NP_567722.1 UniGene:At.2139
ProteinModelPortal:Q9FVI6 SMR:Q9FVI6 IntAct:Q9FVI6 STRING:Q9FVI6
PaxDb:Q9FVI6 PRIDE:Q9FVI6 EnsemblPlants:AT4G25530.1 GeneID:828658
KEGG:ath:AT4G25530 TAIR:At4g25530 eggNOG:NOG295539
InParanoid:Q9FVI6 PhylomeDB:Q9FVI6 Genevestigator:Q9FVI6
GermOnline:AT4G25530 Uniprot:Q9FVI6
Length = 686
Score = 950 (339.5 bits), Expect = 2.1e-124, Sum P(2) = 2.1e-124
Identities = 206/475 (43%), Positives = 296/475 (62%)
Query: 262 PGSMMQTSLEFVEGPVMSLTMPHDRNMLIDLALTAMDELIKMAEADSPLW-IKSLDGGRD 320
PG L+F G + T + ++ ++LA+TA+ ELI + E D P W I + +
Sbjct: 189 PGINATPVLDFSGG---TRTSEKETSIFLNLAITALRELITLGEVDCPFWMIDPIVRSKG 245
Query: 321 VFN-QEEYMRTFSPCIGMKPNGFVTEASRETGMVIINSSALIETMMDANRWAEMFPCMIA 379
V E+Y +F+ KP G + EASR G+V + L++T+MD +W +F I
Sbjct: 246 VSKIYEKYRSSFNNVT--KPPGQIVEASRAKGLVPMTCVTLVKTLMDTGKWVNVF-APIV 302
Query: 380 RSATTDVLLSPSVTGTKNGALQVMVAEFQVLSPLVPVRQAKFLRFCKQHIEGVWAVVDVS 439
A+T +LS GTK+G+LQ + AEFQV+SPLVP R+ F+R+CK+ +G+W VVDV+
Sbjct: 303 PVASTHKVLSTGSGGTKSGSLQQIQAEFQVISPLVPKRKVTFIRYCKEIRQGLWVVVDVT 362
Query: 440 IDTNREGLSADPFQTYRRLPSGFVVQDVPNNYSKVTWIEHAEYDESIVHHLCRPLLSSGM 499
N L P+ +RLPSG ++ D+ N YS+VTWIE AEY+ES +H L +PL+ G+
Sbjct: 363 PTQNPTLL---PYGCSKRLPSGLIIDDLSNGYSQVTWIEQAEYNESHIHQLYQPLIGYGI 419
Query: 500 GFGAPKWVATLQRQCECLAVLMSSTITVQDQSGISPIGRKSMLKLAQRMTYNFCSGVCAS 559
G GA +W+ATLQR CE L+ L S+ +T + G+S G ++KLAQRMT N+ G+ +
Sbjct: 420 GLGAKRWLATLQRHCESLSTLSSTNLT-EISPGLSAKGATEIVKLAQRMTLNYYRGITSP 478
Query: 560 SVRKWDKLCVGNVGEDVRVLTRKNVNDPGEPPGVVLCAATTVWLPMTRQRLFDFMRDERM 619
SV KW K+ V NV +++ + RKNVN+PGE G+VL A+T+VWLP+ + LF F+
Sbjct: 479 SVDKWQKIQVENVAQNMSFMIRKNVNEPGELTGIVLSASTSVWLPVNQHTLFAFISHLSF 538
Query: 620 RSEWDILSNGGPLQEMVHIAKGQAPGNCASLLRAGAMNVNDSGMLILQETWNDSSGSLVV 679
R EWDIL+N ++E + I K + GN SLL+ VN+ GML+LQE WND+SG++VV
Sbjct: 539 RHEWDILTNDTTMEETIRIQKAKRHGNIISLLKI----VNN-GMLVLQEIWNDASGAMVV 593
Query: 680 YAPVDVPSMSMVMNGGDSTCVALLPSGFAILPDGYFG--HGGLINSNGTMVKTEG 732
YAPV+ S+ +V G +S V LPSGF+I+PDG G H G N+ G + T G
Sbjct: 594 YAPVETNSIELVKRGENSDSVKFLPSGFSIVPDGVNGSYHRG--NTGGGCLLTFG 646
Score = 293 (108.2 bits), Expect = 2.1e-124, Sum P(2) = 2.1e-124
Identities = 72/197 (36%), Positives = 104/197 (52%)
Query: 54 QFDPSVVGRIREEEFESRSGSDNVEGASGDDQEANEDGPPRKKKYHRHTPHQIQELESFF 113
Q D VG I + D + SG + ++DG R ++ HR T +Q QELE+F+
Sbjct: 4 QGDLDAVGNIPKPGEAEGDEIDMINDMSGVN---DQDGG-RMRRTHRRTAYQTQELENFY 59
Query: 114 KECPHPDEKQRSELSRRLGLESKQIKFWFQNRRTQMKTQMERHENIILRQEHDKLRAENE 173
E PHP E+QR EL +RL + Q+K WFQN+R K + EN+ LR+EHD+L A +
Sbjct: 60 MENPHPTEEQRYELGQRLNMGVNQVKNWFQNKRNLEKINNDHLENVTLREEHDRLLATQD 119
Query: 174 MLKDAMKNPTCNNCGGPAVPGSVSNYELQQLRIENARLKDELGRICILANKFLGRPLTSS 233
L+ AM CN CG G + YE+Q+L ENA L+ E+ + +++L P
Sbjct: 120 QLRSAMLRSLCNICGKATNCGD-TEYEVQKLMAENANLEREIDQF---NSRYLSHPKQRM 175
Query: 234 AGPISPQGVNSSLELGV 250
S Q +SS G+
Sbjct: 176 VST-SEQAPSSSSNPGI 191
Score = 257 (95.5 bits), Expect = 2.5e-44, Sum P(2) = 2.5e-44
Identities = 60/130 (46%), Positives = 84/130 (64%)
Query: 656 MNVNDSGMLILQETWNDSSGSLVVYAPVDVPSMSMVMNGGDSTCVALLPSGFAILPDGYF 715
+ + ++GML+LQE WND+SG++VVYAPV+ S+ +V G +S V LPSGF+I+PDG
Sbjct: 570 LKIVNNGMLVLQEIWNDASGAMVVYAPVETNSIELVKRGENSDSVKFLPSGFSIVPDGV- 628
Query: 716 GHGGLINSNGTMVKTEGSSNESGGCLLTVGFQILVNSLPTAKLTVESVETVNNLISCTIQ 775
NG+ + N GGCLLT G QILV PTA L +V++V L++ TI
Sbjct: 629 --------NGSYHR----GNTGGGCLLTFGLQILVGINPTAALIQGTVKSVETLMAHTIV 676
Query: 776 KIKAAV-LET 784
KIK+A+ L+T
Sbjct: 677 KIKSALDLQT 686
>TAIR|locus:2129396 [details] [associations]
symbol:HDG4 "AT4G17710" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;IEA;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0006944 "cellular membrane fusion" evidence=RCA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
INTERPRO:IPR002913 GO:GO:0005634 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
EMBL:AL161547 Gene3D:1.10.10.60 SUPFAM:SSF46689 Pfam:PF01852
SMART:SM00234 PROSITE:PS50848 HOGENOM:HOG000243256 KO:K09338
HSSP:Q6B2C0 EMBL:Z97344 eggNOG:NOG264325 EMBL:AY133700
IPI:IPI00546205 PIR:B71447 RefSeq:NP_193506.2 UniGene:At.32974
ProteinModelPortal:Q8L7H4 SMR:Q8L7H4 IntAct:Q8L7H4 PaxDb:Q8L7H4
PRIDE:Q8L7H4 EnsemblPlants:AT4G17710.1 GeneID:827492
KEGG:ath:AT4G17710 TAIR:At4g17710 InParanoid:Q8L7H4
PhylomeDB:Q8L7H4 Genevestigator:Q8L7H4 Uniprot:Q8L7H4
Length = 709
Score = 783 (280.7 bits), Expect = 3.5e-107, Sum P(2) = 3.5e-107
Identities = 190/500 (38%), Positives = 289/500 (57%)
Query: 290 IDLALTAMDELIKMAEADSPLWIKS-LDGGRDVFNQEEYMRTFSPCIGMKPNGFVTEASR 348
++LA++ EL KM + + PLW K LD N+EEY + F + + F EASR
Sbjct: 237 MELAVSCARELAKMCDINEPLWNKKRLDNESVCLNEEEYKKMFLWPLMNDDDRFRREASR 296
Query: 349 ETGMVIINSSALIETMMDANRWAEMFPCMIARSATTDVLLSPSVTGTKNGALQVMVAEFQ 408
++++N L++ +DA++W+EMF I SA T ++S +G +G L +M AE Q
Sbjct: 297 ANAVIMLNCITLVKAFLDADKWSEMF-FPIVSSAKTAQIISSGASGP-SGTLLLMFAELQ 354
Query: 409 VLSPLVPVRQAKFLRFCKQHIE-GVWAVVDVSIDTNREGLSADPFQTYRRLPSGFVVQDV 467
V+SPLVP R+A FLR+ +Q+ E G W VVD ID + SA YRR PSG ++Q +
Sbjct: 355 VVSPLVPTREAYFLRYVEQNAEEGKWMVVDFPIDRIKPA-SATTTDQYRRKPSGCIIQAM 413
Query: 468 PNNYSKVTWIEHAEYDESIVH-HLCRPLLSSGMGFGAPKWVATLQRQCECLAVLMSSTIT 526
N YS+VTW+EH E +E V + R + SG+ FGA +W++ L+RQCE +A LM++ IT
Sbjct: 414 RNGYSQVTWVEHVEVEEKHVQDEVVREFVESGVAFGAERWLSVLKRQCERMASLMATNIT 473
Query: 527 VQDQSGISPI--GRKSMLKLAQRMTYNFCSGVCASSVRKWDKLCVGNVGEDVRVLTRKNV 584
G+ P RK+++KL+QRM FC + S + K + V++++RK
Sbjct: 474 ---DLGVIPSVEARKNLMKLSQRMVKTFCLNIINSHGQAPTK-------DTVKIVSRKVC 523
Query: 585 NDPGEPPGVVLCAATTVWLPMTRQRLFDFMRDERMRSEWDILSNGGPLQEMVHIAKGQAP 644
G+V CA + LP + Q++FD +RD + S+ +IL G QE+ HIA G
Sbjct: 524 G------GLVPCAVSVTLLPYSHQQVFDLLRDNQRLSQLEILFMGSSFQEVAHIANGSHL 577
Query: 645 GNCASLLRAGA-MNVNDSGMLILQETWNDSSGSLVVYAPVDVPSMSMVMNGGDSTCVALL 703
GN SLLR N + + L+LQET D+SGSL+VY+ VD ++ + MNG D + + LL
Sbjct: 578 GNSISLLRINVESNSSHNVELMLQETCTDNSGSLLVYSTVDPVAVQLAMNGEDPSEIPLL 637
Query: 704 PSGFAILPDGYFGHGGLIN-SNGTMVKTEGSSNESGGCLLTVGFQILVNSLPTAKLTVES 762
P GF+++P +N S+G EGSS S CLLTV Q+L +++ T +L + +
Sbjct: 638 PVGFSVVP---------VNPSDGV----EGSSVSSPSCLLTVAIQVLGSNVTTERLDLST 684
Query: 763 VETVNNLISCTIQKIKAAVL 782
V +N+ I T+ +I +A++
Sbjct: 685 VSVINHRICATVNRITSALV 704
Score = 297 (109.6 bits), Expect = 3.5e-107, Sum P(2) = 3.5e-107
Identities = 64/154 (41%), Positives = 90/154 (58%)
Query: 67 EFESRSGSDNVEGASGDDQEANEDGPP--RKKKYHRHTPHQIQELESFFKECPHPDEKQR 124
+ ES SG G + A E PP +KK+YHRHT QIQ++E+ FKE HPD K R
Sbjct: 59 KIESGSGKSTGSGHDPVENTAIEQEPPAAKKKRYHRHTASQIQQMEALFKENAHPDTKTR 118
Query: 125 SELSRRLGLESKQIKFWFQNRRTQMKTQMERHENIILRQEHDKLRAENEMLKDAMKNPTC 184
LS++LGL Q+KFWFQN+RTQ+K Q R +N L+ E++ L+ E++ ++ + C
Sbjct: 119 LRLSKKLGLSPIQVKFWFQNKRTQIKAQQSRSDNAKLKAENETLKTESQNIQSNFQCLFC 178
Query: 185 NNCGGPAVPGSVSNYELQQLRIENARLKDELGRI 218
+ CG LR+ENARL+ EL R+
Sbjct: 179 STCG-------------HNLRLENARLRQELDRL 199
Score = 46 (21.3 bits), Expect = 1.1e-80, Sum P(2) = 1.1e-80
Identities = 18/49 (36%), Positives = 25/49 (51%)
Query: 122 KQRSELSRRLGLESKQIKFWFQNRRTQMKTQMERHENIILRQEHDKLRA 170
K ++E + L ES+ I+ FQ R EN LRQE D+LR+
Sbjct: 154 KLKAE-NETLKTESQNIQSNFQCLFCSTCGHNLRLENARLRQELDRLRS 201
>TAIR|locus:2097770 [details] [associations]
symbol:HDG8 "AT3G03260" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057 Pfam:PF00046
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 INTERPRO:IPR002913
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689
Gene3D:3.30.530.20 InterPro:IPR023393 Pfam:PF01852 SMART:SM00234
PROSITE:PS50848 HOGENOM:HOG000243256 KO:K09338 EMBL:AC012328
EMBL:AK117867 IPI:IPI00538783 RefSeq:NP_186976.2 UniGene:At.41007
ProteinModelPortal:Q9M9P4 SMR:Q9M9P4 PRIDE:Q9M9P4
EnsemblPlants:AT3G03260.1 GeneID:821305 KEGG:ath:AT3G03260
TAIR:At3g03260 InParanoid:Q9M9P4 OMA:LNMESVA PhylomeDB:Q9M9P4
Genevestigator:Q9M9P4 Uniprot:Q9M9P4
Length = 699
Score = 1029 (367.3 bits), Expect = 6.7e-104, P = 6.7e-104
Identities = 258/724 (35%), Positives = 401/724 (55%)
Query: 75 DNVEGASGDDQEANEDGPPR-KKKYHRHTPHQIQELESFFKECPHPDEKQRSELSRRLGL 133
+N G+SG++Q + D K+ HRHTP QIQ LE++FKECPHPDE+QR++L R L L
Sbjct: 3 NNGGGSSGNEQYTSGDAKQNGKRTCHRHTPQQIQRLEAYFKECPHPDERQRNQLCRELKL 62
Query: 134 ESKQIKFWFQNRRTQMKTQMERHENIILRQEHDKLRAENEMLKDAMKNPTCNNCGGPAVP 193
E QIKFWFQN+RTQ KTQ +R N++LR E++ L+++NE + DA+K+ C CGGP
Sbjct: 63 EPDQIKFWFQNKRTQSKTQEDRSTNVLLRGENETLQSDNEAMLDALKSVLCPACGGPPFG 122
Query: 194 GSVSNYELQQLRIENARLKDELGRICILANKFL-GRPLTSSAGPISPQGVNSSLE-LGVG 251
+ LQ+LR ENARLKD RI ++ P + P SL+ + G
Sbjct: 123 REERGHNLQKLRFENARLKDHRDRISNFVDQHKPNEPTVEDSLAYVP-----SLDRISYG 177
Query: 252 RNGFGGVANIPGSMMQTSLEFVEGPVMSLTMPHDRNMLIDLALTAMDELIKMAEADSPLW 311
NG G + S + + ++ ++ T D ++L ++A +A++EL ++ A+ W
Sbjct: 178 ING-GNMYEPSSSYGPPNFQIIQPRPLAET---DMSLLSEIAASAVEELKRLFLAEEQFW 233
Query: 312 IKSLDGGRDVFNQEEYMRTFSPCIG-MKPNGFVTEASRETGMVIINSSALIETMMDANRW 370
+KS V + E Y R FS + E+S+ +V + + LI+ +D +W
Sbjct: 234 VKSCIDETYVIDTESYER-FSHAVKHFSSTTAHVESSKAVTVVHVEAINLIQMFLDPEKW 292
Query: 371 AEMFPCMIARSATTDVLLSP-SVTGTKNGALQVMVAEFQVLSPLVPVRQAKFLRFCKQHI 429
E+FP ++ ++ T VL S + G N LQVM + +LSPLVP R+ +R C++
Sbjct: 293 KELFPTIVNKANTIHVLGSGLPIRGNCN-VLQVMWEQLHILSPLVPAREFMVVRCCQEIE 351
Query: 430 EGVWAVVDVSIDTNREGLSADPFQTYRRLPSGFVVQDVPNNYSKVTWIEHAEYDESI-VH 488
+G+W + DVS N + +A Y+R PSG ++Q +P+ +SKV WIEH E D + H
Sbjct: 352 KGIWIIADVSHRANFDFGNA---ACYKR-PSGCLIQALPDAHSKVMWIEHVEVDHKLDTH 407
Query: 489 HLCRPLLSSGMGFGAPKWVATLQRQCECLAVLMSSTITVQDQSGISPIG--RKSMLKLAQ 546
+ R LLS G G+GA +W+ TL+R CE +A+ T+ D+S + G R+S++KL +
Sbjct: 408 KIYRDLLSGGSGYGAKRWIVTLERMCERMALSSIQTLPPSDRSEVITTGEARRSVMKLGE 467
Query: 547 RMTYNFCSGVCASSVRKWDKLCVGNVGEDVRVLTRKNVNDPGEPPGVVLCAATTVWLPMT 606
RM NF + S K D G VRV R N+ + G+PPG+V+ A++++ +P+T
Sbjct: 468 RMVKNFNEMLTMSG--KIDFPQQSKNG--VRVSIRMNI-EAGQPPGIVVSASSSLAIPLT 522
Query: 607 RQRLFDFMRDERMRSEWDILSNGGPLQEMVHIAKGQAPGNCASLLRA--------GAMNV 658
++F F+++ R +WDILS G + E+ I G + NC ++LR M V
Sbjct: 523 PLQVFAFLQNLDTRQQWDILSYGTVVNEIARIVTGSSETNCVTILRVHPTHEENNDKMVV 582
Query: 659 NDS---GMLILQETWNDSSGSLVVYAPVDVPSMSMVMNGG-DSTCVALLPSGFAILPDGY 714
DS ML+LQ+ + D+ G ++VYAP+D+ +M ++G D + + +LPSGF I DG
Sbjct: 583 QDSCKDDMLMLQDCYMDALGGMIVYAPMDMATMHFAVSGEVDPSHIPILPSGFVISSDG- 641
Query: 715 FGHGGLINSNGTMVKTEGSSNESGGCLLTVGFQILVNSLPTAKLTVESVETVNNLISCTI 774
+ GT++ SG N + ++ +SV+TV+ LIS TI
Sbjct: 642 --RRSTVEDGGTLLTVAFQILVSGKA----------NR--SREVNEKSVDTVSALISSTI 687
Query: 775 QKIK 778
Q+IK
Sbjct: 688 QRIK 691
>TAIR|locus:2167230 [details] [associations]
symbol:HDG9 "AT5G17320" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA;IDA] InterPro:IPR001356 InterPro:IPR009057
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
INTERPRO:IPR002913 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:3.30.530.20
InterPro:IPR023393 Pfam:PF01852 SMART:SM00234 PROSITE:PS50848
HOGENOM:HOG000243256 EMBL:AB005238 ProtClustDB:CLSN2679643
IPI:IPI00529269 RefSeq:NP_197234.1 UniGene:At.54882
ProteinModelPortal:Q9FFI0 SMR:Q9FFI0 EnsemblPlants:AT5G17320.1
GeneID:831598 KEGG:ath:AT5G17320 TAIR:At5g17320 eggNOG:KOG0493
InParanoid:Q9FFI0 PhylomeDB:Q9FFI0 Genevestigator:Q9FFI0
Uniprot:Q9FFI0
Length = 718
Score = 924 (330.3 bits), Expect = 9.0e-93, P = 9.0e-93
Identities = 251/735 (34%), Positives = 378/735 (51%)
Query: 75 DNVEGASGDDQEANEDGPPRKKKYHRHTPHQIQELESFFKECPHPDEKQRSELSRRLGLE 134
DN +D +AN + KK YHRHT QI LE++FKECPHPDE QR L L L+
Sbjct: 7 DNSSDERENDVDANTNNRHEKKGYHRHTNEQIHRLETYFKECPHPDEFQRRLLGEELNLK 66
Query: 135 SKQIKFWFQNRRTQMKTQMERHENIILRQEHDKLRAENEMLKDAMKNPTCNNCGGPAVPG 194
KQIKFWFQN+RTQ K+ E+ +N LR E+ K+R ENE ++DA+ N C CGG PG
Sbjct: 67 PKQIKFWFQNKRTQAKSHNEKADNAALRAENIKIRRENESMEDALNNVVCPPCGGRG-PG 125
Query: 195 SVSNYE-LQQLRIENARLKDELGRICILANKFLGRPLTSSAGPISPQGVNSSLELGVGRN 253
LQ+LR +NA LKDE R+ ++ G + + G ++ R
Sbjct: 126 REDQLRHLQKLRAQNAYLKDEYERVSNYLKQYGGHSMHNVEATPYLHGPSNHASTSKNRP 185
Query: 254 GFGGVANIPGSMMQTSLEFVEGPV----MSLTMPHDRNMLIDLA----LTAMDELIKMAE 305
G ++ + + S F GP M+ T P +++ L+ ++++ +
Sbjct: 186 ALYGTSS--NRLPEPSSIF-RGPYTRGNMNTTAPPQPRKPLEMQNFQPLSQLEKIAMLEA 242
Query: 306 ADSPLW-IKSLDGGRDVFNQEEYMR---TFSPCIGMK------PNGFVTEASRETGMVII 355
A+ + + SL D ++ + P + K NG E+S++ +V +
Sbjct: 243 AEKAVSEVLSLIQMDDTMWKKSSIDDRLVIDPGLYEKYFTKTNTNGR-PESSKDVVVVQM 301
Query: 356 NSSALIETMMDANRWAEMFPCMIARSATTDVLLSPSVTGTKNGALQVMVAEFQVLSPLVP 415
++ LI+ + A +WA +FP ++ + T VL S G K + +V+ + +LSPLVP
Sbjct: 302 DAGNLIDIFLTAEKWARLFPTIVNEAKTIHVLDSVDHRG-KTFS-RVIYEQLHILSPLVP 359
Query: 416 VRQAKFLRFCKQHIEGVWAVVDVSIDT-NREGLSADPFQTYRRLPSGFVVQDVPNNYSKV 474
R+ LR C+Q + VW + DVS N E + P T R PSG ++Q +P+ +SKV
Sbjct: 360 PREFMILRTCQQIEDNVWMIADVSCHLPNIEFDLSFPICTKR--PSGVLIQALPHGFSKV 417
Query: 475 TWIEHAEYDESIV--HHLCRPLLSSGMGFGAPKWVATLQRQCECLAVLMS-STITVQDQS 531
TWIEH +++ V H L R LL G G+GA +W TL+R CE L S + D
Sbjct: 418 TWIEHVVVNDNRVRPHKLYRDLLYGGFGYGARRWTVTLERTCERLIFSTSVPALPNNDNP 477
Query: 532 GISPI--GRKSMLKLAQRMTYNFCSGVCASSVRKWDKLCVGNVGED-VRVLTRKNVNDPG 588
G+ GR S++ L +RM NF + V K D +R+ R N N+ G
Sbjct: 478 GVVQTIRGRNSVMHLGERMLRNFAWMM--KMVNKLDFSPQSETNNSGIRIGVRIN-NEAG 534
Query: 589 EPPGVVLCAATTVWLPMTRQRLFDFMRDERMRSEWDILSNGGPLQEMVHIAKGQAPGNCA 648
+PPG+++CA +++ LP+ +++DF+++ +R +WD+L +G P E G P N
Sbjct: 535 QPPGLIVCAGSSLSLPLPPVQVYDFLKNLEVRHQWDVLCHGNPATEAARFVTGSNPRNTV 594
Query: 649 SLLRAGAMNVNDSGMLILQETWNDSSGSLVVYAPVDVPSMSMVMNGG-DSTCVALLPSGF 707
S L ++N ++ILQ+++ D+ G +V YAP+D+ + ++G D T + +LPSGF
Sbjct: 595 SFLEPSIRDINTK-LMILQDSFKDALGGMVAYAPMDLNTACAAISGDIDPTTIPILPSGF 653
Query: 708 AILPDGYFGHGGLINSNGTMVKTEGSSNESGGCLLTVGFQILVNS---LPTAKLTVESVE 764
I DG G + EG S LLTV FQILV+ P L V S
Sbjct: 654 MISRDGRPSEG----------EAEGGSYT----LLTVAFQILVSGPSYSPDTNLEV-SAT 698
Query: 765 TVNNLISCTIQKIKA 779
TVN LIS T+Q+IKA
Sbjct: 699 TVNTLISSTVQRIKA 713
>TAIR|locus:2062540 [details] [associations]
symbol:HDG3 "AT2G32370" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;IEA;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0048825 "cotyledon development" evidence=IGI]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
INTERPRO:IPR002913 GO:GO:0005634 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:3.30.530.20
InterPro:IPR023393 Pfam:PF01852 SMART:SM00234 PROSITE:PS50848
HOGENOM:HOG000243256 KO:K09338 eggNOG:NOG261733 GO:GO:0048825
EMBL:AC005700 EMBL:EF988635 IPI:IPI00527257 PIR:C84732
RefSeq:NP_180796.2 UniGene:At.38083 ProteinModelPortal:Q9ZV65
SMR:Q9ZV65 PaxDb:Q9ZV65 PRIDE:Q9ZV65 EnsemblPlants:AT2G32370.1
GeneID:817798 KEGG:ath:AT2G32370 TAIR:At2g32370 InParanoid:A7LBA8
PhylomeDB:Q9ZV65 Genevestigator:Q9ZV65 Uniprot:Q9ZV65
Length = 725
Score = 900 (321.9 bits), Expect = 3.1e-90, P = 3.1e-90
Identities = 190/470 (40%), Positives = 288/470 (61%)
Query: 254 GFGGVANIPGSMMQTSLEFVEGPVMSLTMPHDRNMLIDLALTAMDELIKMAEADSPLWIK 313
G G N+ +T+ GP + T P ++++LA AM+EL+ MA+ PLW+
Sbjct: 224 GMGSKGNVGNHSRETT-----GPADANTKP----IIMELAFGAMEELLVMAQVAEPLWMG 274
Query: 314 SLDGGRDVFNQEEYMRTFSPCIGMKPNGFVTEASRETGMVIINSSALIETMMDANRWAEM 373
+G N +EY +TF +G + GF TEASRET +V + + ++E +M N W+ M
Sbjct: 275 GFNGTSLALNLDEYEKTFRTGLGPRLGGFRTEASRETALVAMCPTGIVEMLMQENLWSTM 334
Query: 374 FPCMIARSATTDVLLSPSVTGTKNGALQVMVAEFQVLSPLVPVRQAKFLRFCKQHIEGVW 433
F ++ R+ T + +++ + G NG LQ+M AE+QVLSPLV R++ F+R+CKQ EG+W
Sbjct: 335 FAGIVGRARTHEQIMADAA-GNFNGNLQIMSAEYQVLSPLVTTRESYFVRYCKQQGEGLW 393
Query: 434 AVVDVSIDTNREGLSADPFQTYRRLPSGFVVQDVPNNYSKVTWIEHAEYDESIVHHLCRP 493
AVVD+SID ++ RR PSG ++Q++ + YSKVTW+EH E D++ + +
Sbjct: 394 AVVDISIDHLLPNINLK----CRRRPSGCLIQEMHSGYSKVTWVEHVEVDDAGSYSIFEK 449
Query: 494 LLSSGMGFGAPKWVATLQRQCECLAVLMSS---TITVQDQSGISPIGRKSMLKLAQRMTY 550
L+ +G F A +WV TL RQCE ++ ++S+ ++ D ++ G+ SMLK+A+R+
Sbjct: 450 LICTGQAFAANRWVGTLVRQCERISSILSTDFQSVDSGDHITLTNHGKMSMLKIAERIAR 509
Query: 551 NFCSGVCASSVRKWDKLCVGNVGEDVRVLTRKNVNDPGEPPGVVLCAATTVWLPMTRQRL 610
F +G+ ++ + G GED+RV+T K+VNDPG+PPGV++CAAT+ WLP +
Sbjct: 510 TFFAGMTNAT---GSTIFSGVEGEDIRVMTMKSVNDPGKPPGVIICAATSFWLPAPPNTV 566
Query: 611 FDFMRDERMRSEWDILSNGGPLQEMVHIAKGQAPGNCASLLRAGAMNVNDSGMLILQETW 670
FDF+R+ R WD+L NG + ++ I G NCASLLR G + + S M+I+QET
Sbjct: 567 FDFLREATHRHNWDVLCNGEMMHKIAEITNGIDKRNCASLLRHG--HTSKSKMMIVQETS 624
Query: 671 NDSSGSLVVYAPVDVPSMSMVMNGG-DSTCVALLPSGFAILPDGYFGHGG 719
D + S V+YAPVD+ SM + ++GG D V +LPSGFAI PDG GG
Sbjct: 625 TDPTASFVLYAPVDMTSMDITLHGGGDPDFVVILPSGFAIFPDGTGKPGG 674
Score = 715 (256.8 bits), Expect = 2.1e-92, Sum P(2) = 2.1e-92
Identities = 156/380 (41%), Positives = 232/380 (61%)
Query: 65 EEEFESRSGSDNVEGASGDDQEANEDGPPRKKKYHRHTPHQIQELESFFKECPHPDEKQR 124
+++F+S + S G G+ N+ +KKKY+RHT QI E+E+FF+ECPHPD+KQR
Sbjct: 42 DQDFDSGNTSS---GNHGEGLGNNQAPRHKKKKYNRHTQLQISEMEAFFRECPHPDDKQR 98
Query: 125 SELSRRLGLESKQIKFWFQNRRTQMKTQMERHENIILRQEHDKLRAENEMLKDAMKNPTC 184
+LS +LGL+ QIKFWFQN+RTQ K Q ER EN LR ++ LR+EN+ L++A+ C
Sbjct: 99 YDLSAQLGLDPVQIKFWFQNKRTQNKNQQERFENSELRNLNNHLRSENQRLREAIHQALC 158
Query: 185 NNCGGPAVPGSVSNYELQQLRIENARLKDELGRICILANKF---LGRPLTSSAGPISPQG 241
CGG G ++ +E LRI NARL +E+ ++ + A K G P+ S +SP
Sbjct: 159 PKCGGQTAIGEMT-FEEHHLRILNARLTEEIKQLSVTAEKISRLTGIPVRSHPR-VSPPN 216
Query: 242 VNSSLELGVGRNGFGGVANIPGSMMQTSLEFVEGPVMSLTMPHDRNMLIDLALTAMDELI 301
+ E G+G G N+ +T+ GP + T P ++++LA AM+EL+
Sbjct: 217 PPPNFEFGMGSKG-----NVGNHSRETT-----GPADANTKP----IIMELAFGAMEELL 262
Query: 302 KMAEADSPLWIKSLDGGRDVFNQEEYMRTFSPCIGMKPNGFVTEASRETGMVIINSSALI 361
MA+ PLW+ +G N +EY +TF +G + GF TEASRET +V + + ++
Sbjct: 263 VMAQVAEPLWMGGFNGTSLALNLDEYEKTFRTGLGPRLGGFRTEASRETALVAMCPTGIV 322
Query: 362 ETMMDANRWAEMFPCMIARSATTDVLLSPSVTGTKNGALQVMVAEFQVLSPLVPVRQAKF 421
E +M N W+ MF ++ R+ T + +++ + G NG LQ+M AE+QVLSPLV R++ F
Sbjct: 323 EMLMQENLWSTMFAGIVGRARTHEQIMADAA-GNFNGNLQIMSAEYQVLSPLVTTRESYF 381
Query: 422 LRFCKQHIEGVWAVVDVSID 441
+R+CKQ EG+WAVVD+SID
Sbjct: 382 VRYCKQQGEGLWAVVDISID 401
Score = 225 (84.3 bits), Expect = 2.1e-92, Sum P(2) = 2.1e-92
Identities = 55/123 (44%), Positives = 74/123 (60%)
Query: 657 NVNDSGMLILQETWNDSSGSLVVYAPVDVPSMSMVMNGG-DSTCVALLPSGFAILPDGYF 715
+ + S M+I+QET D + S V+YAPVD+ SM + ++GG D V +LPSGFAI PDG
Sbjct: 611 HTSKSKMMIVQETSTDPTASFVLYAPVDMTSMDITLHGGGDPDFVVILPSGFAIFPDGTG 670
Query: 716 GHGGLINSNGTMVKTEGSSNESGGCLLTVGFQILVNSLPTAKLTVESVETVNNLISCTIQ 775
GG + GG LLT+ FQ+LV S P A+L+V SV T NLI T++
Sbjct: 671 KPGG----------------KEGGSLLTISFQMLVESGPEARLSVSSVATTENLIRTTVR 714
Query: 776 KIK 778
+IK
Sbjct: 715 RIK 717
Score = 44 (20.5 bits), Expect = 2.1e-14, Sum P(2) = 2.1e-14
Identities = 13/51 (25%), Positives = 26/51 (50%)
Query: 237 ISPQGVNSSLELG--VGRNGFGGVANIPGSMMQTSLEFVEGPVMSLTMPHD 285
++ G S L++ + R F G+ N GS + + +E + VM++ +D
Sbjct: 492 LTNHGKMSMLKIAERIARTFFAGMTNATGSTIFSGVEGEDIRVMTMKSVND 542
>TAIR|locus:2023932 [details] [associations]
symbol:HDG10 "AT1G34650" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057 Pfam:PF00046
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 INTERPRO:IPR002913
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689
Gene3D:3.30.530.20 InterPro:IPR023393 Pfam:PF01852 SMART:SM00234
PROSITE:PS50848 HOGENOM:HOG000243256 EMBL:AC007894 EMBL:AC023279
IPI:IPI00526139 PIR:B86470 RefSeq:NP_174724.1 UniGene:At.51941
ProteinModelPortal:Q9S9Z0 SMR:Q9S9Z0 EnsemblPlants:AT1G34650.1
GeneID:840369 KEGG:ath:AT1G34650 TAIR:At1g34650 InParanoid:Q9S9Z0
PhylomeDB:Q9S9Z0 ProtClustDB:CLSN2679643 Genevestigator:Q9S9Z0
Uniprot:Q9S9Z0
Length = 708
Score = 792 (283.9 bits), Expect = 8.7e-79, P = 8.7e-79
Identities = 224/728 (30%), Positives = 359/728 (49%)
Query: 80 ASGDDQEANEDGPPRKKKYHRHTPHQIQELESFFKECPHPDEKQRSELSRRLGLESKQIK 139
+S +D ++E+G + H H+ HQ+Q LE+FF ECPHPD+ QR +L L L+ KQIK
Sbjct: 3 SSHNDSSSDEEGIDSNNRRH-HSNHQVQRLEAFFHECPHPDDSQRRQLGNELNLKHKQIK 61
Query: 140 FWFQNRRTQMKTQMERHENIILRQEHDKLRAENEMLKDAMKNPTCNNCGGPAVPGSVSNY 199
FWFQNRRTQ + E+ +NI LR E+ K+R NE ++ A++ C CGGP G
Sbjct: 62 FWFQNRRTQARIHNEKADNIALRVENMKIRCVNEAMEKALETVLCPPCGGPH--GKEEQL 119
Query: 200 -ELQQLRIENARLKDELGRICILANKFLGRPLTSSAGPISPQGVNSSLELGVGRNG-FGG 257
LQ+LR +N LK E R+ K G + S G ++ R +G
Sbjct: 120 CNLQKLRTKNVILKTEYERLSSYLTKHGGYSIPSVDALPDLHGPSTYGSTSNNRPASYGS 179
Query: 258 VAN-IPGSMMQTSLEFVEGPVMSLTMP------H-------DRNMLIDLALTAMDELIKM 303
+N +P F + + +P H ++N + ++A A+ E++ +
Sbjct: 180 SSNHLPQQSSLLRRPFTRELINTTPLPKPVLLQHFQQLSQLEKNRMFEIAKNAVAEVMSL 239
Query: 304 AEADSPLWIKSLDGGRDVFNQEEYMRTFSPCIGMKPNGFVTEASRETGMVIINSSALIET 363
+ + +WIKS GR + + Y R F+ +K + ++ E+ M ++
Sbjct: 240 IQMEHSMWIKSTIDGRAIIDPGNYKRYFTKNSHLKSRSAL-QSHHESSMEVVVVQMDARN 298
Query: 364 MMDANRWAEMFPCM---IARSATTDVLLSPSVTGTKNGALQVMVAEFQVLSPLVPVRQAK 420
++D E + + I A T +L S+ + +V+ + +LSPLV R+
Sbjct: 299 LVDMFLNTEKWARLFPTIVTEAKTIHVLD-SMDHPRQTFSRVVYEQLHILSPLVLPREFI 357
Query: 421 FLRFCKQHIEGVWAVVDVSIDT-NREGLSADPFQTYRRLPSGFVVQDVPNNYSKVTWIEH 479
LR C+Q E +W + DVS N E S P T R PSG ++Q +P+ SKVTWIEH
Sbjct: 358 ILRTCQQMKEDLWLIADVSCYLQNVEFESTAPICTKR--PSGVLIQALPHGRSKVTWIEH 415
Query: 480 AEYDESI-VHHLCRPLLSSGMGFGAPKWVATLQRQCECLAVLMSSTITVQDQSGISPIGR 538
E + + H L R LL G G+GA +W ATLQR CE L++ + D G+ +
Sbjct: 416 VEVTDKVWPHQLYRDLLYGGFGYGARRWTATLQRMCERLSLYSMTDFPPTDYPGV--VKT 473
Query: 539 KSMLKLAQRMTYNFCSGVCASSVRKWDKLCV----GNVGEDVRVLTRKNVNDPGEPPGVV 594
+ + A ++ DKL + G VR+ R N + G+PPG++
Sbjct: 474 IEGRRSVMSLGERMLKNF-AWIMKMSDKLDLPQQSGANNSGVRISVRTNT-EAGQPPGLI 531
Query: 595 LCAATTVWLPMTRQRLFDFMRDERMRSEWDILSNGGPLQEMVHIAKGQAPGNCASLLRAG 654
+CA +++ LP+ +++DF+R+ +R +WD+ G P+ E G N + L+
Sbjct: 532 VCAGSSLSLPLPPLQVYDFLRNLEVRHQWDVHCQGNPVTEAARFVTGPDQKNNVTFLQPS 591
Query: 655 AMNVNDSGMLILQETWNDSSGSLVVYAPVDVPSMSMVMNGG-DSTCVALLPSGFAILPDG 713
+ V + ++ILQ+ + D+ G +VVYAP+++ + ++G D + + +LPSGF I D
Sbjct: 592 S--VGEYKLMILQDGFIDALGGMVVYAPMNLNTAYSAISGQVDPSTIPILPSGFIISRD- 648
Query: 714 YFGHGGLINSNGTMVKTEGSSNESGGCLLTVGFQILVN--SLPTAKLTVESVETVNNLIS 771
S+ + + +G S LLT+ FQI V S T +S TVN L+S
Sbjct: 649 ---------SHPSSSEVDGGSMT----LLTLAFQIFVTGPSYYTDLNLKDSATTVNTLVS 695
Query: 772 CTIQKIKA 779
+Q+IKA
Sbjct: 696 SAVQRIKA 703
>TAIR|locus:2182850 [details] [associations]
symbol:AT5G07260 "AT5G07260" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0006944 "cellular membrane fusion" evidence=RCA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=RCA] INTERPRO:IPR002913 EMBL:CP002688
GenomeReviews:BA000015_GR Pfam:PF01852 PROSITE:PS50848
EMBL:BT003974 EMBL:BT005131 IPI:IPI00531581 RefSeq:NP_196343.2
UniGene:At.23335 ProteinModelPortal:Q84JD1 PaxDb:Q84JD1
EnsemblPlants:AT5G07260.1 GeneID:830617 KEGG:ath:AT5G07260
TAIR:At5g07260 HOGENOM:HOG000147055 InParanoid:Q84JD1
PhylomeDB:Q84JD1 ProtClustDB:CLSN2686056 ArrayExpress:Q84JD1
Genevestigator:Q84JD1 Uniprot:Q84JD1
Length = 541
Score = 354 (129.7 bits), Expect = 3.7e-35, Sum P(2) = 3.7e-35
Identities = 106/377 (28%), Positives = 180/377 (47%)
Query: 386 VLLSPSVTGTKNGALQVMVAEFQVLSPLVPVRQAKFLRFCKQHIEG-VWAVVDVSIDTNR 444
++ SV + G ++ V +SPL+ R K LR + HIE WA+ ++S+ +
Sbjct: 175 IIADVSVESQQRGLQKINVNFMPQISPLIQTRNVKLLRRSR-HIEDDTWAIAEISMYFSS 233
Query: 445 EGLSADPFQTYRRLPSGFVVQDVPNNYSKVTWIEHAEYDESIVHHLCRPLLSSGMGFGAP 504
P Y R PSG+++Q + N SKVT ++H Y E + +S FGA
Sbjct: 234 YAQHLRP--EYMRFPSGYLIQHIANGISKVTILDHWVYKEEEGMNT----FNSNSEFGAQ 287
Query: 505 KWVATLQRQ----CECLAVLMSSTITVQDQSGISPIGRKSMLKLAQRMTYNFCSGVCASS 560
+W+ LQ+ C + I + DQ I RK++L L+ M FCSGVC +
Sbjct: 288 RWLTALQKHYYNTCPVSIPSIGHNIQIFDQ-----ICRKNLLNLSSFMVNVFCSGVCGIT 342
Query: 561 VRKWDKL-CVGNVGEDVRVLTRKNVNDPGEPPGVVLCAATTVWLPMTRQR-LFDFMRDER 618
++W++L VG ++R+ T+++ G P VL +AT + T+ +F +
Sbjct: 343 GQRWNRLNTVGVSANNIRMFTQESRGMSGIP--CVLVSATGLARMHTKPEVMFGLINGAE 400
Query: 619 MRSEWDILSNGGPLQEMVHIAKGQAPGNCASLLRAGAMNVNDSGMLILQETWNDSSGSLV 678
+ W L + ++E++ I + N S+ + ++QET+ D SG+++
Sbjct: 401 KQEIWSYLESAKDMKELIRIGRHPNSWNEVSVFSIEWKGSKE--WYLIQETYYDESGAMI 458
Query: 679 VYAPVDVPSMSMVMNGGDSTCVALLPSGFAILP----DGYFGHGGLINSNGTMVKTEGSS 734
++ V+ P + +NGGD + V LLPSGF I+P + + + ++ TMV S
Sbjct: 459 IHTCVEAPYFAAAINGGDLSGVELLPSGFTIIPCESQECFVTASCYVKADQTMVT---SP 515
Query: 735 NESGGCLLTVGFQILVN 751
NE G + + IL N
Sbjct: 516 NELGSYMENMVTNILGN 532
Score = 329 (120.9 bits), Expect = 4.6e-32, Sum P(2) = 4.6e-32
Identities = 97/351 (27%), Positives = 167/351 (47%)
Query: 296 AMDELIKMAEADSPLWIKSLDGGRDVFNQEEYMRTFSPCIGMKPNGFVTEASRETGMVII 355
++ E++ +A +P+W + GR N +EY P GFV E SR + V
Sbjct: 99 SLKEVVFLARQRTPMWTSN---GR--LNLDEYYSKLFPWYARNAPGFVHEVSRASAFVPC 153
Query: 356 NSSALIETMMDANRWAEMFPCMIARSATTDVLLSPSVTGTKNGALQVMVAEFQVLSPLVP 415
++S+L+ +M+ W ++FP +IA DV SV + G ++ V +SPL+
Sbjct: 154 DASSLVANLMNHVSWQKIFPSIIA-----DV----SVESQQRGLQKINVNFMPQISPLIQ 204
Query: 416 VRQAKFLRFCKQHIEG-VWAVVDVSIDTNREGLSADPFQTYRRLPSGFVVQDVPNNYSKV 474
R K LR + HIE WA+ ++S+ + P Y R PSG+++Q + N SKV
Sbjct: 205 TRNVKLLRRSR-HIEDDTWAIAEISMYFSSYAQHLRP--EYMRFPSGYLIQHIANGISKV 261
Query: 475 TWIEHAEYDESIVHHLCRPLLSSGMGFGAPKWVATLQRQ----CECLAVLMSSTITVQDQ 530
T ++H Y E + +S FGA +W+ LQ+ C + I + DQ
Sbjct: 262 TILDHWVYKEEEGMNT----FNSNSEFGAQRWLTALQKHYYNTCPVSIPSIGHNIQIFDQ 317
Query: 531 SGISPIGRKSMLKLAQRMTYNFCSGVCASSVRKWDKL-CVGNVGEDVRVLTRKNVNDPGE 589
I RK++L L+ M FCSGVC + ++W++L VG ++R+ T+++ G
Sbjct: 318 -----ICRKNLLNLSSFMVNVFCSGVCGITGQRWNRLNTVGVSANNIRMFTQESRGMSGI 372
Query: 590 PPGVVLCAATTVWLPMTRQRLFDFMRDERMRSEWDILSNGGPLQEMVHIAK 640
P V++ A + + +F + + W L + ++E++ I +
Sbjct: 373 PC-VLVSATGLARMHTKPEVMFGLINGAEKQEIWSYLESAKDMKELIRIGR 422
Score = 94 (38.1 bits), Expect = 3.7e-35, Sum P(2) = 3.7e-35
Identities = 24/65 (36%), Positives = 38/65 (58%)
Query: 159 IILRQEHDKLRAENEMLKDAMKNPT-CNNCGGPAVPGSVSNYELQQLRIENARLKDELGR 217
I L Q++D LRAEN AM +P+ C +C P + + E ++L +ENARL+ E+
Sbjct: 9 IFLHQQNDLLRAENRARIHAMTSPSICRSCEEPII-----STEERELWLENARLRSEIDT 63
Query: 218 I-CIL 221
+ C +
Sbjct: 64 LTCFI 68
>TAIR|locus:2116442 [details] [associations]
symbol:AT4G26920 "AT4G26920" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] INTERPRO:IPR002913 EMBL:CP002687
GenomeReviews:CT486007_GR EMBL:AL161566 GO:GO:0003677 Pfam:PF01852
PROSITE:PS50848 HOGENOM:HOG000147055 IPI:IPI00519973 PIR:D85312
RefSeq:NP_194422.1 UniGene:At.54524 ProteinModelPortal:Q9M0J8
STRING:Q9M0J8 PaxDb:Q9M0J8 PRIDE:Q9M0J8 EnsemblPlants:AT4G26920.1
GeneID:828799 KEGG:ath:AT4G26920 TAIR:At4g26920 eggNOG:NOG311290
OMA:WIIADIS PhylomeDB:Q9M0J8 ArrayExpress:Q9M0J8
Genevestigator:Q9M0J8 Uniprot:Q9M0J8
Length = 461
Score = 193 (73.0 bits), Expect = 4.2e-23, Sum P(2) = 4.2e-23
Identities = 51/190 (26%), Positives = 95/190 (50%)
Query: 287 NMLIDLALTAMDELIKMAEADSPLWIKSLDGGRDVFNQEEYMRTFSPCIGMKPNGFVTEA 346
N+ + LA ++E+I +A +SPLW +S ++ EY F P FV EA
Sbjct: 63 NLWVVLACI-VNEIIALATLESPLWRRSQR--EEMLTLNEYYSRFFPWYAKNVPRFVHEA 119
Query: 347 SRETGMVIINSSALIETMMDANRWAEMFPCMIARSATTDVLLSPSVTGTKNGALQVMVAE 406
SR + ++ +++S L+ + + RW +FP ++ + S+ + + ++ E
Sbjct: 120 SRASEVIHVDASWLLTKLKNPMRWVTIFPSLVG---------NVSIESSNDDVRMIIDME 170
Query: 407 FQVL-SPLVPVRQAKFLRFCKQHIEGVWAVVDVSIDTNREGLSADPFQTYRRLPSGFVVQ 465
F L +P++P R+ K LR+C + W + D+S+ + S D + R PSGF+++
Sbjct: 171 FLTLITPVIPTRKVKVLRYCHRIANDTWIIADISMYLS--SYSDDLRPEFLRFPSGFIIK 228
Query: 466 DVPNNYSKVT 475
V + +VT
Sbjct: 229 HVARIF-RVT 237
Score = 154 (59.3 bits), Expect = 4.2e-23, Sum P(2) = 4.2e-23
Identities = 51/200 (25%), Positives = 102/200 (51%)
Query: 537 GRKSMLKLAQRMTYNFCSGVCASSVRKWDKLCVGNVGEDVRVLTRKNVNDPGEPPGVVLC 596
G+ ++L+ ++R+ + FCSG C + L G DVRV + ++ + P G++
Sbjct: 241 GKNNLLQASKRLVHIFCSGTCGVIGNRGRWLGAGR-RFDVRVSSLESRDMIRHPYGIISA 299
Query: 597 AATTVWLPMTRQRLFDFMRD-ERMRSEWDILSNGGPLQEMVHIAKGQAPG-NCASLLRAG 654
+ T + + LF + +++ + +G L++++ I + N SL +
Sbjct: 300 SGLTK-IHAKPEILFPLIYGVKKLEIHNHLRLSGNDLKQVLRITRDDITSRNDVSLF-SF 357
Query: 655 AMNVNDSGMLILQETWNDSSGSLVVYAPVDVPSMSMVMNGGDSTCVALLPSGFAILPDGY 714
+N N + + +LQE +N++S S+V+++ +DV S++ ++NG D + P GF I+P
Sbjct: 358 RLN-NSTEVFLLQEAYNEASSSMVIHSILDVSSLAKIING-DRSYSFTYPCGFTIMPGQN 415
Query: 715 FGH--GGLINSNGTM-VKTE 731
G G + S G + + TE
Sbjct: 416 SGDEDAGCVVSVGFLTIATE 435
Score = 58 (25.5 bits), Expect = 4.1e-13, Sum P(2) = 4.1e-13
Identities = 12/39 (30%), Positives = 20/39 (51%)
Query: 726 TMVKTEGSSNESGGCLLTVGFQILVNSLPTAKLTVESVE 764
T++ + S +E GC+++VGF + A V VE
Sbjct: 409 TIMPGQNSGDEDAGCVVSVGFLTIATEEIVANTLVSDVE 447
>TAIR|locus:2034086 [details] [associations]
symbol:ATHB-15 "AT1G52150" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS;TAS] [GO:0005634 "nucleus" evidence=ISM;ISS;IDA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0009965 "leaf morphogenesis" evidence=IMP]
[GO:0009855 "determination of bilateral symmetry" evidence=RCA;IMP]
[GO:0010014 "meristem initiation" evidence=RCA;IMP] [GO:0009887
"organ morphogenesis" evidence=RCA;IMP] [GO:0010073 "meristem
maintenance" evidence=RCA;TAS] [GO:0010075 "regulation of meristem
growth" evidence=RCA;IMP] [GO:0010087 "phloem or xylem
histogenesis" evidence=IMP] [GO:0048263 "determination of dorsal
identity" evidence=IMP] [GO:0080060 "integument development"
evidence=IGI] [GO:0006995 "cellular response to nitrogen
starvation" evidence=RCA] [GO:0007155 "cell adhesion" evidence=RCA]
[GO:0009944 "polarity specification of adaxial/abaxial axis"
evidence=RCA] [GO:0010051 "xylem and phloem pattern formation"
evidence=RCA] [GO:0010089 "xylem development" evidence=RCA]
[GO:0010090 "trichome morphogenesis" evidence=RCA] [GO:0045010
"actin nucleation" evidence=RCA] [GO:0048439 "flower morphogenesis"
evidence=RCA] [GO:0048519 "negative regulation of biological
process" evidence=RCA] [GO:0048765 "root hair cell differentiation"
evidence=RCA] [GO:0071555 "cell wall organization" evidence=RCA]
InterPro:IPR001356 InterPro:IPR009057 Pfam:PF00046 PROSITE:PS50071
SMART:SM00389 INTERPRO:IPR002913 EMBL:CP002684 GO:GO:0005634
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
Gene3D:3.30.530.20 InterPro:IPR023393 Pfam:PF01852 SMART:SM00234
PROSITE:PS50848 GO:GO:0009965 GO:GO:0010087 KO:K09338
HOGENOM:HOG000272677 ProtClustDB:CLSN2679470 GO:GO:0080060
InterPro:IPR013978 Pfam:PF08670 GO:GO:0010075 GO:GO:0048263
EMBL:AC006216 GO:GO:0010014 IPI:IPI00545601 RefSeq:NP_849795.1
UniGene:At.11011 ProteinModelPortal:B3H4G8 SMR:B3H4G8 STRING:B3H4G8
PRIDE:B3H4G8 EnsemblPlants:AT1G52150.2 GeneID:841645
KEGG:ath:AT1G52150 OMA:EHVASMA Genevestigator:B3H4G8 Uniprot:B3H4G8
Length = 837
Score = 148 (57.2 bits), Expect = 2.3e-15, Sum P(3) = 2.3e-15
Identities = 34/85 (40%), Positives = 49/85 (57%)
Query: 97 KYHRHTPHQIQELESFFKECPHPDEKQRSELSRRL----GLESKQIKFWFQNRRTQMKTQ 152
KY R+TP Q++ LE + +CP P +R +L R +E KQIK WFQNRR + K
Sbjct: 17 KYVRYTPEQVEALERLYHDCPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREK-- 74
Query: 153 MERHENIILRQEHDKLRAENEMLKD 177
+R E L+ + KL A N++L +
Sbjct: 75 -QRKEASRLQAVNRKLTAMNKLLME 98
Score = 130 (50.8 bits), Expect = 2.3e-15, Sum P(3) = 2.3e-15
Identities = 70/301 (23%), Positives = 125/301 (41%)
Query: 340 NGFVTEASRETGMVIINSSALIETMMDANRWAEMFPCMIARSATTDVLLSPSVTGTKNGA 399
+G A+R G+V + + + E + D W C +VL P+ G G
Sbjct: 200 HGCTGVAARACGLVGLEPTRVAEIVKDRPSWFR--ECRAVE--VMNVL--PTANG---GT 250
Query: 400 LQVMVAEFQVLSPLVPVRQAKFLRFCKQHIEGVWAVVDVSIDTNREGLSADPFQTYRR-- 457
++++ + + L P R LR+ +G V + S+ + + G S Q + R
Sbjct: 251 VELLYMQLYAPTTLAPPRDFWLLRYTSVLEDGSLVVCERSLKSTQNGPSMPLVQNFVRAE 310
Query: 458 -LPSGFVVQDVPNNYSKVTWIEHAEYDESIVHHLCRPLLSSGMGFGAPKWVATLQRQCEC 516
L SG++++ S + ++H + + V + RPL S +A L RQ +
Sbjct: 311 MLSSGYLIRPCDGGGSIIHIVDHMDLEACSVPEVLRPLYESPKVLAQKTTMAAL-RQLKQ 369
Query: 517 LAVLMSSTITVQDQSGISPIGRK--SMLKLAQRMTYNFCSGVCASSVRKWDKLCVGNVGE 574
+A +T Q S ++ GR+ ++ L+QR++ F V + W +G+ +
Sbjct: 370 IA----QEVT-QTNSSVNGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWS--VIGDSMD 422
Query: 575 DVRVLTRKNVND---------PGEPP--GVVLCAATTVWLPMTRQR-LFDFMRDERMRSE 622
DV + + + G P VVLCA ++ L L F+R+ R SE
Sbjct: 423 DVTITVNSSPDKLMGLNLTFANGFAPVSNVVLCAKASMLLQNVPPAILLRFLREHR--SE 480
Query: 623 W 623
W
Sbjct: 481 W 481
Score = 51 (23.0 bits), Expect = 2.3e-15, Sum P(3) = 2.3e-15
Identities = 15/62 (24%), Positives = 31/62 (50%)
Query: 721 INSNGTMVKTEGSSNES-GGCLLTVGFQILVNSLPTAKLTVESVETVNNLISCTIQKIKA 779
I S GT T+ S N + ++T+ F+ + S + + + V +IS ++Q++
Sbjct: 612 IGSAGTKASTDQSGNSTCARSVMTIAFEFGIESHMQEHVASMARQYVRGIIS-SVQRVAL 670
Query: 780 AV 781
A+
Sbjct: 671 AL 672
Score = 45 (20.9 bits), Expect = 6.6e-05, Sum P(3) = 6.6e-05
Identities = 21/63 (33%), Positives = 29/63 (46%)
Query: 121 EKQRSELSRRLGLESKQIKFWFQNRRTQMKTQMERHENIILRQEHDKLRAENEMLKDAMK 180
EKQR E SR L++ K N K ME EN L+++ +L EN +
Sbjct: 73 EKQRKEASR---LQAVNRKLTAMN-----KLLME--ENDRLQKQVSQLVHENSYFRQHTP 122
Query: 181 NPT 183
NP+
Sbjct: 123 NPS 125
>TAIR|locus:2134088 [details] [associations]
symbol:HB-8 "AT4G32880" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;ISS;IDA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0008284 "positive regulation of cell
proliferation" evidence=IMP] [GO:0010089 "xylem development"
evidence=RCA;IMP] [GO:0045597 "positive regulation of cell
differentiation" evidence=IMP] [GO:0009733 "response to auxin
stimulus" evidence=IEP] [GO:0010014 "meristem initiation"
evidence=RCA;IMP] [GO:0010072 "primary shoot apical meristem
specification" evidence=RCA;IMP] [GO:0010067 "procambium
histogenesis" evidence=IEP] [GO:0007062 "sister chromatid cohesion"
evidence=RCA] [GO:0007155 "cell adhesion" evidence=RCA] [GO:0009793
"embryo development ending in seed dormancy" evidence=RCA]
[GO:0009855 "determination of bilateral symmetry" evidence=RCA]
[GO:0009880 "embryonic pattern specification" evidence=RCA]
[GO:0009887 "organ morphogenesis" evidence=RCA] [GO:0009888 "tissue
development" evidence=RCA] [GO:0009944 "polarity specification of
adaxial/abaxial axis" evidence=RCA] [GO:0010090 "trichome
morphogenesis" evidence=RCA] [GO:0010228 "vegetative to
reproductive phase transition of meristem" evidence=RCA]
[GO:0010431 "seed maturation" evidence=RCA] [GO:0010638 "positive
regulation of organelle organization" evidence=RCA] [GO:0016049
"cell growth" evidence=RCA] [GO:0033044 "regulation of chromosome
organization" evidence=RCA] [GO:0042546 "cell wall biogenesis"
evidence=RCA] [GO:0044036 "cell wall macromolecule metabolic
process" evidence=RCA] [GO:0045010 "actin nucleation" evidence=RCA]
[GO:0045595 "regulation of cell differentiation" evidence=RCA]
[GO:0048589 "developmental growth" evidence=RCA] [GO:0048765 "root
hair cell differentiation" evidence=RCA] [GO:0051301 "cell
division" evidence=RCA] [GO:0071555 "cell wall organization"
evidence=RCA] InterPro:IPR001356 InterPro:IPR004827
InterPro:IPR009057 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00338 SMART:SM00389 INTERPRO:IPR002913 GO:GO:0005634
GO:GO:0030154 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0009733
GO:GO:0008284 GO:GO:0043565 GO:GO:0045597 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0010072
Gene3D:3.30.530.20 InterPro:IPR023393 Pfam:PF01852 SMART:SM00234
PROSITE:PS50848 GO:GO:0010089 KO:K09338 HSSP:P10037
HOGENOM:HOG000272677 ProtClustDB:CLSN2679470 InterPro:IPR013978
Pfam:PF08670 EMBL:AL161582 EMBL:Z50851 EMBL:AJ441292 EMBL:AY099631
EMBL:BT008798 IPI:IPI00546637 PIR:T10695 RefSeq:NP_195014.1
UniGene:At.31628 ProteinModelPortal:Q39123 SMR:Q39123 IntAct:Q39123
STRING:Q39123 PaxDb:Q39123 PRIDE:Q39123 EnsemblPlants:AT4G32880.1
GeneID:829424 KEGG:ath:AT4G32880 TAIR:At4g32880 eggNOG:NOG325934
InParanoid:Q39123 OMA:DAVMCCS PhylomeDB:Q39123
Genevestigator:Q39123 GO:GO:0010067 Uniprot:Q39123
Length = 833
Score = 151 (58.2 bits), Expect = 1.1e-14, Sum P(3) = 1.1e-14
Identities = 34/85 (40%), Positives = 49/85 (57%)
Query: 97 KYHRHTPHQIQELESFFKECPHPDEKQRSELSRRL----GLESKQIKFWFQNRRTQMKTQ 152
KY R+TP Q++ LE + +CP P +R +L R +E KQIK WFQNRR + K
Sbjct: 15 KYVRYTPEQVEALERLYNDCPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREK-- 72
Query: 153 MERHENIILRQEHDKLRAENEMLKD 177
+R E L+ + KL A N++L +
Sbjct: 73 -QRKEASRLQAVNRKLTAMNKLLME 96
Score = 126 (49.4 bits), Expect = 1.1e-14, Sum P(3) = 1.1e-14
Identities = 75/316 (23%), Positives = 129/316 (40%)
Query: 336 GMKPN----GFVTEASRETGMVIINSSALIETMMDANRWAEMF---PCMIARSATTDVLL 388
GMKP G V + TG + + L+ +D R AE+ PC + + D++
Sbjct: 184 GMKPGPDSIGIVAISHGCTG-IAARACGLVG--LDPTRVAEILKDKPCWLRDCRSLDIV- 239
Query: 389 SPSVTGTKNGA-LQVMVAEFQVLSPLVPVRQAKFLRFCKQHIEGVWAVVDVSIDTNREGL 447
+V T NG L+++ + + L P R LR+ +G + + S++ + G
Sbjct: 240 --NVLSTANGGTLELIYMQLYAPTTLAPARDFWMLRYTSVMEDGSLVICERSLNNTQNGP 297
Query: 448 SADPFQTYRR---LPSGFVVQDVPNNYSKVTWIEHAEYDESIVHHLCRPLLSSGMGFGAP 504
S P + R LPSG++++ S + ++H + + V + R L S
Sbjct: 298 SMPPSPHFVRAEILPSGYLIRPCEGGGSILHIVDHFDLEPWSVPEVLRSLYES------- 350
Query: 505 KWVATLQRQCECLAVLMSSTITVQD--QSGISPIGRK--SMLKLAQRMTYNFCSGVCASS 560
+TL Q +A L Q+ Q ++ GR+ ++ L+QR++ F V S
Sbjct: 351 ---STLLAQRTTMAALRYLRQISQEISQPNVTGWGRRPAALRALSQRLSKGFNEAVNGFS 407
Query: 561 VRKWDKLCVGNVGEDVRVLTRKN------------VNDPGEPPGVVLCAATTVWLP-MTR 607
W L + +DV +L + N P VLCA ++ L +
Sbjct: 408 DEGWSILESDGI-DDVTLLVNSSPTKMMMTSSLPFANGYTSMPSAVLCAKASMLLQNVPP 466
Query: 608 QRLFDFMRDERMRSEW 623
L F+R+ R EW
Sbjct: 467 SILLRFLREHRQ--EW 480
Score = 57 (25.1 bits), Expect = 1.0e-07, Sum P(3) = 1.0e-07
Identities = 53/217 (24%), Positives = 89/217 (41%)
Query: 507 VATLQRQCECLAVLMSSTITVQDQS-GISPIGRKSMLKLAQRMTYNFCSGVCASSVRKWD 565
+AT CE + +T Q Q SP G +L +A F S ++V +W
Sbjct: 125 LATTDTSCESVVTSGQHHLTPQHQPRDASPAG---LLSIADETLTEFISKATGTAV-EWV 180
Query: 566 KLCVGNVGED-VRVLTRKNVNDPGEPPGVVLCAATTVWLPMTR--QRLFD---FMRDERM 619
++ G D + ++ + G G+ A V L TR + L D ++RD R
Sbjct: 181 QMPGMKPGPDSIGIVAISH----G-CTGIAARACGLVGLDPTRVAEILKDKPCWLRDCRS 235
Query: 620 RSEWDILS--NGGPLQEM---VHIAKGQAPGNCASLLRAGAMNVNDSGMLILQETWNDSS 674
++LS NGG L+ + ++ AP +LR ++ + D ++I + + N++
Sbjct: 236 LDIVNVLSTANGGTLELIYMQLYAPTTLAPARDFWMLRYTSV-MEDGSLVICERSLNNTQ 294
Query: 675 GSLVVYAPVDVPSMSMVMNGGDSTCVALLPSGFAILP 711
P PS V +LPSG+ I P
Sbjct: 295 NG-----PSMPPSPHFVR-------AEILPSGYLIRP 319
Score = 45 (20.9 bits), Expect = 1.1e-14, Sum P(3) = 1.1e-14
Identities = 27/114 (23%), Positives = 55/114 (48%)
Query: 678 VVYAPVDVPSMSMVMNGGDSTCVALLPSGFAILP-----DGYFGHGGLINSNGTMV--KT 730
+++AP+D S S D+ ++PSGF I+P +G + L ++ V +T
Sbjct: 567 LIFAPIDA-SFS-----DDA---PIIPSGFRIIPLDSKSEGLSPNRTLDLASALDVGSRT 617
Query: 731 EGSSNESGG---CLLTVGFQILVNSLPTAKLTVESVETVNNLISCTIQKIKAAV 781
G S S G ++T+ FQ+ + + + V ++I+ ++Q++ A+
Sbjct: 618 AGDSCGSRGNSKSVMTIAFQLAFEMHMQENVASMARQYVRSVIA-SVQRVALAL 670
Score = 45 (20.9 bits), Expect = 1.0e-07, Sum P(3) = 1.0e-07
Identities = 16/52 (30%), Positives = 21/52 (40%)
Query: 723 SNGTMVKTEGSSNESGGCLLTVGFQ---ILVNSLPTAKLTVESVETVNNLIS 771
S G G S+E L + G +LVNS PT + S+ N S
Sbjct: 396 SKGFNEAVNGFSDEGWSILESDGIDDVTLLVNSSPTKMMMTSSLPFANGYTS 447
>TAIR|locus:2061544 [details] [associations]
symbol:PHB "AT2G34710" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;ISS;IDA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0009855 "determination of bilateral symmetry"
evidence=RCA;IMP] [GO:0009944 "polarity specification of
adaxial/abaxial axis" evidence=RCA;IMP] [GO:0010014 "meristem
initiation" evidence=RCA;IMP] [GO:0010072 "primary shoot apical
meristem specification" evidence=RCA;IMP] [GO:0080060 "integument
development" evidence=IGI] [GO:0007062 "sister chromatid cohesion"
evidence=RCA] [GO:0007131 "reciprocal meiotic recombination"
evidence=RCA] [GO:0007155 "cell adhesion" evidence=RCA] [GO:0009640
"photomorphogenesis" evidence=RCA] [GO:0009793 "embryo development
ending in seed dormancy" evidence=RCA] [GO:0009845 "seed
germination" evidence=RCA] [GO:0009880 "embryonic pattern
specification" evidence=RCA] [GO:0009909 "regulation of flower
development" evidence=RCA] [GO:0009933 "meristem structural
organization" evidence=RCA] [GO:0009965 "leaf morphogenesis"
evidence=RCA] [GO:0010051 "xylem and phloem pattern formation"
evidence=RCA] [GO:0010073 "meristem maintenance" evidence=RCA]
[GO:0010075 "regulation of meristem growth" evidence=RCA]
[GO:0010090 "trichome morphogenesis" evidence=RCA] [GO:0010162
"seed dormancy process" evidence=RCA] [GO:0010182 "sugar mediated
signaling pathway" evidence=RCA] [GO:0010228 "vegetative to
reproductive phase transition of meristem" evidence=RCA]
[GO:0010431 "seed maturation" evidence=RCA] [GO:0010564 "regulation
of cell cycle process" evidence=RCA] [GO:0016049 "cell growth"
evidence=RCA] [GO:0016567 "protein ubiquitination" evidence=RCA]
[GO:0019915 "lipid storage" evidence=RCA] [GO:0033044 "regulation
of chromosome organization" evidence=RCA] [GO:0042138 "meiotic DNA
double-strand break formation" evidence=RCA] [GO:0045010 "actin
nucleation" evidence=RCA] [GO:0045132 "meiotic chromosome
segregation" evidence=RCA] [GO:0045595 "regulation of cell
differentiation" evidence=RCA] [GO:0048366 "leaf development"
evidence=RCA] [GO:0048589 "developmental growth" evidence=RCA]
[GO:0048765 "root hair cell differentiation" evidence=RCA]
[GO:0048825 "cotyledon development" evidence=RCA] [GO:0050826
"response to freezing" evidence=RCA] [GO:0051301 "cell division"
evidence=RCA] [GO:0071555 "cell wall organization" evidence=RCA]
[GO:0009955 "adaxial/abaxial pattern specification" evidence=IMP]
InterPro:IPR001356 InterPro:IPR009057 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 INTERPRO:IPR002913 GO:GO:0005634
GO:GO:0030154 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003677
GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 EMBL:AC003096
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0010072 Gene3D:3.30.530.20
InterPro:IPR023393 Pfam:PF01852 SMART:SM00234 PROSITE:PS50848
GO:GO:0009855 GO:GO:0009944 KO:K09338 EMBL:Y11122 EMBL:AJ441291
EMBL:AY099791 EMBL:BT000335 IPI:IPI00538463 PIR:T01364
RefSeq:NP_181018.1 UniGene:At.37771 HSSP:P10037
ProteinModelPortal:O04291 SMR:O04291 IntAct:O04291 STRING:O04291
PaxDb:O04291 PRIDE:O04291 EnsemblPlants:AT2G34710.1 GeneID:818036
KEGG:ath:AT2G34710 TAIR:At2g34710 eggNOG:NOG264261
HOGENOM:HOG000272677 InParanoid:O04291 OMA:NRKLNAM PhylomeDB:O04291
ProtClustDB:CLSN2679470 Genevestigator:O04291 GO:GO:0080060
InterPro:IPR013978 Pfam:PF08670 Uniprot:O04291
Length = 852
Score = 154 (59.3 bits), Expect = 1.2e-14, Sum P(3) = 1.2e-14
Identities = 37/97 (38%), Positives = 53/97 (54%)
Query: 88 NEDGPPR---KKKYHRHTPHQIQELESFFKECPHPDEKQRSELSRRL----GLESKQIKF 140
N + P + KY R+TP Q++ LE + ECP P +R +L R +E KQIK
Sbjct: 13 NRESPDKGLDSGKYVRYTPEQVEALERVYTECPKPSSLRRQQLIRECPILSNIEPKQIKV 72
Query: 141 WFQNRRTQMKTQMERHENIILRQEHDKLRAENEMLKD 177
WFQNRR + K +R E L+ + KL A N++L +
Sbjct: 73 WFQNRRCREK---QRKEAARLQTVNRKLNAMNKLLME 106
Score = 106 (42.4 bits), Expect = 1.2e-14, Sum P(3) = 1.2e-14
Identities = 68/293 (23%), Positives = 115/293 (39%)
Query: 346 ASRETGMVIINSSALIETMMDANRWAEMFPCMIARSATTDVLLSPSVTGTKNGALQVMVA 405
A+R G+V + + E + D W C RS T + + P+ G G ++++
Sbjct: 219 AARACGLVSLEPMKVAEILKDRPSWLR--DC---RSVDT-LSVIPAGNG---GTIELIYT 269
Query: 406 EFQVLSPLVPVRQAKFLRFCKQHIEGVWAVVDVSIDTNREGLSADPFQTYRRL---PSGF 462
+ + L R LR+ +G + V + S+ + G + P + R PSGF
Sbjct: 270 QMYAPTTLAAARDFWTLRYSTCLEDGSYVVCERSLTSATGGPTGPPSSNFVRAEMKPSGF 329
Query: 463 VVQDVPNNYSKVTWIEHAEYDESIVHHLCRPLLSSGMGFGAPKWVATLQRQCECLAVLMS 522
+++ S + ++H + D V + RPL S VA L+ + +
Sbjct: 330 LIRPCDGGGSILHIVDHVDLDAWSVPEVMRPLYESSKILAQKMTVAALRHVRQ---IAQE 386
Query: 523 STITVQDQSGISPIGRKSMLKLAQRMTYNFCSGVCASSVRKWDKLCVGNVG-EDVRVLTR 581
++ VQ G P ++ +QR+ F V W + G+ G EDV V+
Sbjct: 387 TSGEVQYGGGRQPAVLRTF---SQRLCRGFNDAVNGFVDDGWSPM--GSDGAEDVTVMIN 441
Query: 582 KNVNDPGEP-------PGV---VLCAATTVWLPMTRQR-LFDFMRDERMRSEW 623
+ G P VLCA ++ L L F+R+ R SEW
Sbjct: 442 LSPGKFGGSQYGNSFLPSFGSGVLCAKASMLLQNVPPAVLVRFLREHR--SEW 492
Score = 62 (26.9 bits), Expect = 1.2e-14, Sum P(3) = 1.2e-14
Identities = 24/92 (26%), Positives = 44/92 (47%)
Query: 702 LLPSGFAILP--DGYFGHGGLINSNGTMVKT-EGSSNESG-----GC----LLTVGFQIL 749
LLPSGF I+P +G N + EGS+ ++G GC +LT+ FQ
Sbjct: 595 LLPSGFRIIPLEQKSTPNGASANRTLDLASALEGSTRQAGEADPNGCNFRSVLTIAFQFT 654
Query: 750 VNSLPTAKLTVESVETVNNLISCTIQKIKAAV 781
++ + + + V +++ +IQ++ A+
Sbjct: 655 FDNHSRDSVASMARQYVRSIVG-SIQRVALAI 685
Score = 46 (21.3 bits), Expect = 9.0e-07, Sum P(2) = 9.0e-07
Identities = 19/69 (27%), Positives = 36/69 (52%)
Query: 517 LAVLMSSTITVQD---QSGISPIGRKSML----KLAQRMTYNFCSGVCASSVRK---WDK 566
L +L ++ + +QD + GRK++ K+ Q+ + +GVCASS+ + +++
Sbjct: 767 LDMLETTLVALQDIMLDKTLDEPGRKALCSEFPKIMQQGYAHLPAGVCASSMGRMVSYEQ 826
Query: 567 LCVGNVGED 575
V V ED
Sbjct: 827 ATVWKVLED 835
>TAIR|locus:2028140 [details] [associations]
symbol:PHV "AT1G30490" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0009943 "adaxial/abaxial axis specification"
evidence=IMP] [GO:0009855 "determination of bilateral symmetry"
evidence=RCA;IMP] [GO:0009944 "polarity specification of
adaxial/abaxial axis" evidence=RCA;IMP] [GO:0010014 "meristem
initiation" evidence=RCA;IMP] [GO:0010072 "primary shoot apical
meristem specification" evidence=RCA;IMP] [GO:0005515 "protein
binding" evidence=IPI] [GO:0009880 "embryonic pattern
specification" evidence=IGI] [GO:0080060 "integument development"
evidence=IGI] [GO:0007155 "cell adhesion" evidence=RCA] [GO:0010051
"xylem and phloem pattern formation" evidence=RCA] [GO:0010073
"meristem maintenance" evidence=RCA] [GO:0010075 "regulation of
meristem growth" evidence=RCA] [GO:0010090 "trichome morphogenesis"
evidence=RCA] [GO:0045010 "actin nucleation" evidence=RCA]
[GO:0048765 "root hair cell differentiation" evidence=RCA]
[GO:0071555 "cell wall organization" evidence=RCA]
InterPro:IPR001356 InterPro:IPR009057 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 INTERPRO:IPR002913 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0030154 GO:GO:0003677
GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 EMBL:AC009917
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0010072 Gene3D:3.30.530.20
InterPro:IPR023393 Pfam:PF01852 SMART:SM00234 PROSITE:PS50848
GO:GO:0009855 GO:GO:0009880 GO:GO:0009944 KO:K09338 HSSP:P10037
HOGENOM:HOG000272677 ProtClustDB:CLSN2679470 GO:GO:0080060
InterPro:IPR013978 Pfam:PF08670 EMBL:Y10922 EMBL:AJ440967
EMBL:AK221046 EMBL:AK226570 IPI:IPI00523245 PIR:H86429
RefSeq:NP_174337.1 UniGene:At.27961 UniGene:At.33151
ProteinModelPortal:O04292 SMR:O04292 IntAct:O04292 STRING:O04292
PRIDE:O04292 EnsemblPlants:AT1G30490.1 GeneID:839928
KEGG:ath:AT1G30490 TAIR:At1g30490 eggNOG:NOG326783
InParanoid:O04292 OMA:ICRSYRI PhylomeDB:O04292
Genevestigator:O04292 Uniprot:O04292
Length = 841
Score = 158 (60.7 bits), Expect = 1.3e-14, Sum P(3) = 1.3e-14
Identities = 38/101 (37%), Positives = 58/101 (57%)
Query: 81 SGDDQEANEDGPPRKKKYHRHTPHQIQELESFFKECPHPDEKQRSELSRRL----GLESK 136
S DD+++ + G KY R+TP Q++ LE + ECP P +R +L R +E +
Sbjct: 6 SMDDRDSPDKGFD-SGKYVRYTPEQVEALERVYAECPKPSSLRRQQLIRECPILCNIEPR 64
Query: 137 QIKFWFQNRRTQMKTQMERHENIILRQEHDKLRAENEMLKD 177
QIK WFQNRR + K +R E+ L+ + KL A N++L +
Sbjct: 65 QIKVWFQNRRCREK---QRKESARLQTVNRKLSAMNKLLME 102
Score = 108 (43.1 bits), Expect = 1.3e-14, Sum P(3) = 1.3e-14
Identities = 63/292 (21%), Positives = 115/292 (39%)
Query: 346 ASRETGMVIINSSALIETMMDANRWAEMFPCMIARSATTDVLLSPSVTGTKNGALQVMVA 405
A+R G+V + + E + D W C+ T +V+ P+ G G ++++
Sbjct: 215 AARACGLVSLEPMKVAEILKDRPSWFRDCRCV----ETLNVI--PTGNG---GTIELVNT 265
Query: 406 EFQVLSPLVPVRQAKFLRFCKQHIEGVWAVVDVSIDTNREGLS---ADPFQTYRRLPSGF 462
+ + L R LR+ +G + V + S+ + G + + F + L SGF
Sbjct: 266 QIYAPTTLAAARDFWTLRYSTSLEDGSYVVCERSLTSATGGPNGPLSSSFVRAKMLSSGF 325
Query: 463 VVQDVPNNYSKVTWIEHAEYDESIVHHLCRPLLSSGMGFGAPKWVATLQRQCECLAVLMS 522
+++ S + ++H + D S V + RPL S VA L+ + +
Sbjct: 326 LIRPCDGGGSIIHIVDHVDLDVSSVPEVLRPLYESSKILAQKMTVAALRHVRQ---IAQE 382
Query: 523 STITVQDQSGISPIGRKSMLKLAQRMTYNFCSGVCASSVRKWDKLCVGNVGEDVRVLTRK 582
++ VQ G P ++ +QR+ F V W + + GED+ ++
Sbjct: 383 TSGEVQYSGGRQPAVLRTF---SQRLCRGFNDAVNGFVDDGWSPMS-SDGGEDITIMINS 438
Query: 583 N-VNDPGEPPGV---------VLCAATTVWLPMTRQR-LFDFMRDERMRSEW 623
+ G G VLCA ++ L L F+R+ R +EW
Sbjct: 439 SSAKFAGSQYGSSFLPSFGSGVLCAKASMLLQNVPPLVLIRFLREHR--AEW 488
Score = 55 (24.4 bits), Expect = 1.3e-14, Sum P(3) = 1.3e-14
Identities = 22/88 (25%), Positives = 41/88 (46%)
Query: 702 LLPSGFAILP-DGYFG---HGGLINSNGTMVKTEGSS---NESGGCL-LTVGFQILVNSL 753
LLPSGF ++P D H + +GS+ +E+ L LT+ FQ ++
Sbjct: 591 LLPSGFRVIPLDQKTNPNDHQSASRTRDLASSLDGSTKTDSETNSRLVLTIAFQFTFDNH 650
Query: 754 PTAKLTVESVETVNNLISCTIQKIKAAV 781
+ + + V N++ +IQ++ A+
Sbjct: 651 SRDNVATMARQYVRNVVG-SIQRVALAI 677
Score = 42 (19.8 bits), Expect = 8.3e-07, Sum P(2) = 8.3e-07
Identities = 16/69 (23%), Positives = 35/69 (50%)
Query: 517 LAVLMSSTITVQD---QSGISPIGRKSML----KLAQRMTYNFCSGVCASSVRK---WDK 566
L +L ++ + +QD + GR+++ K+ Q+ N +G+C SS+ + +++
Sbjct: 756 LDMLETTLVALQDIMLDKTLDDSGRRALCSEFAKIMQQGYANLPAGICVSSMGRPVSYEQ 815
Query: 567 LCVGNVGED 575
V V +D
Sbjct: 816 ATVWKVVDD 824
>TAIR|locus:2175856 [details] [associations]
symbol:REV "AT5G60690" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;ISS;IDA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0008289 "lipid binding" evidence=ISS]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0030154 "cell differentiation" evidence=IMP] [GO:0010014
"meristem initiation" evidence=RCA;IMP] [GO:0009956 "radial pattern
formation" evidence=IMP] [GO:0010051 "xylem and phloem pattern
formation" evidence=RCA;IMP] [GO:0009855 "determination of
bilateral symmetry" evidence=RCA;IMP] [GO:0009944 "polarity
specification of adaxial/abaxial axis" evidence=RCA;IMP]
[GO:0007155 "cell adhesion" evidence=RCA] [GO:0009887 "organ
morphogenesis" evidence=RCA] [GO:0009965 "leaf morphogenesis"
evidence=RCA] [GO:0010072 "primary shoot apical meristem
specification" evidence=RCA] [GO:0010073 "meristem maintenance"
evidence=RCA] [GO:0010075 "regulation of meristem growth"
evidence=RCA] [GO:0010090 "trichome morphogenesis" evidence=RCA]
[GO:0016049 "cell growth" evidence=RCA] [GO:0045010 "actin
nucleation" evidence=RCA] [GO:0045595 "regulation of cell
differentiation" evidence=RCA] [GO:0048439 "flower morphogenesis"
evidence=RCA] [GO:0048519 "negative regulation of biological
process" evidence=RCA] [GO:0048589 "developmental growth"
evidence=RCA] [GO:0048765 "root hair cell differentiation"
evidence=RCA] [GO:0071555 "cell wall organization" evidence=RCA]
InterPro:IPR001356 InterPro:IPR009057 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 INTERPRO:IPR002913 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0030154 GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 EMBL:AB005246 Gene3D:1.10.10.60
SUPFAM:SSF46689 Gene3D:3.30.530.20 InterPro:IPR023393 Pfam:PF01852
SMART:SM00234 PROSITE:PS50848 GO:GO:0010051 GO:GO:0009855
GO:GO:0009944 KO:K09338 HSSP:P10037 ProtClustDB:CLSN2679470
InterPro:IPR013978 Pfam:PF08670 GO:GO:0009956 GO:GO:0010014
EMBL:AF188994 EMBL:AY170127 EMBL:AF233592 EMBL:AK229564
EMBL:EF598684 EMBL:EF598685 EMBL:EF598686 EMBL:EF598687
EMBL:EF598688 EMBL:EF598689 EMBL:EF598690 EMBL:EF598691
EMBL:EF598692 EMBL:EF598693 EMBL:EF598694 EMBL:EF598695
EMBL:EF598696 EMBL:EF598697 EMBL:EF598698 EMBL:EF598699
EMBL:EF598700 EMBL:EF598701 EMBL:EF598702 EMBL:EF598703
EMBL:EF598704 EMBL:EF598705 EMBL:EF598706 IPI:IPI00531930
RefSeq:NP_200877.1 UniGene:At.49201 UniGene:At.7238
ProteinModelPortal:Q9SE43 SMR:Q9SE43 STRING:Q9SE43 PaxDb:Q9SE43
PRIDE:Q9SE43 EnsemblPlants:AT5G60690.1 GeneID:836190
KEGG:ath:AT5G60690 TAIR:At5g60690 eggNOG:NOG323815
InParanoid:Q9M5B6 OMA:TIELVYM PhylomeDB:Q9SE43
Genevestigator:Q9SE43 Uniprot:Q9SE43
Length = 842
Score = 144 (55.7 bits), Expect = 9.9e-13, Sum P(4) = 9.9e-13
Identities = 39/109 (35%), Positives = 57/109 (52%)
Query: 77 VEGASGDDQEANEDGPPR----KKKYHRHTPHQIQELESFFKECPHPDEKQRSELSRRLG 132
+E A + +E + D R KY R+T Q++ LE + ECP P +R +L R
Sbjct: 1 MEMAVANHRERSSDSMNRHLDSSGKYVRYTAEQVEALERVYAECPKPSSLRRQQLIRECS 60
Query: 133 L----ESKQIKFWFQNRRTQMKTQMERHENIILRQEHDKLRAENEMLKD 177
+ E KQIK WFQNRR + K +R E L+ + KL A N++L +
Sbjct: 61 ILANIEPKQIKVWFQNRRCRDK---QRKEASRLQSVNRKLSAMNKLLME 106
Score = 112 (44.5 bits), Expect = 9.9e-13, Sum P(4) = 9.9e-13
Identities = 82/363 (22%), Positives = 145/363 (39%)
Query: 273 VEGPVMSLTMPHDRNMLIDLALTAMDELIKMAEADSPLWIKSLDGGRDVFNQEEYMRTFS 332
V P SL + L+ +A + E + A + W++ + G + + + F+
Sbjct: 142 VTTPQHSLRDANSPAGLLSIAEETLAEFLSKATGTAVDWVQ-MPGMKP---GPDSVGIFA 197
Query: 333 PCIGMKPNGFVTEASRETGMVIINSSALIETMMDANRWAEMFPCMIARSATTDVLLSPSV 392
I + NG A+R G+V + + E + D W C RS + P+
Sbjct: 198 --ISQRCNGV---AARACGLVSLEPMKIAEILKDRPSWFR--DC---RSLEVFTMF-PAG 246
Query: 393 TGTKNGALQVMVAEFQVLSPLVPVRQAKFLRFCKQHIEGVWAVVDVSIDTNREG---LSA 449
G G ++++ + + L P R LR+ G + V + S+ + G SA
Sbjct: 247 NG---GTIELVYMQTYAPTTLAPARDFWTLRYTTSLDNGSFVVCERSLSGSGAGPNAASA 303
Query: 450 DPFQTYRRLPSGFVVQDVPNNYSKVTWIEHAEYDESIVHHLCRPLLSSGMGFGAPKWVAT 509
F L SG++++ S + ++H + V + RPL S A K +
Sbjct: 304 SQFVRAEMLSSGYLIRPCDGGGSIIHIVDHLNLEAWSVPDVLRPLYESSKVV-AQKMTIS 362
Query: 510 LQRQCECLAVLMSSTITVQDQSG--ISPIGRK-SMLK-LAQRMTYNFCSGVCASSVRKWD 565
R LA Q+ +G + +GR+ ++L+ +QR++ F V W
Sbjct: 363 ALRYIRQLA---------QESNGEVVYGLGRQPAVLRTFSQRLSRGFNDAVNGFGDDGWS 413
Query: 566 KL-CVGNVGEDVRVLTRKNVNDPGEPP---GVVLCAATTVWLPMTRQR-LFDFMRDERMR 620
+ C G V + + K++N+ G VLCA ++ L L F+R+ R
Sbjct: 414 TMHCDGAEDIIVAINSTKHLNNISNSLSFLGGVLCAKASMLLQNVPPAVLIRFLREHR-- 471
Query: 621 SEW 623
SEW
Sbjct: 472 SEW 474
Score = 50 (22.7 bits), Expect = 9.9e-13, Sum P(4) = 9.9e-13
Identities = 12/48 (25%), Positives = 26/48 (54%)
Query: 734 SNESGGCLLTVGFQILVNSLPTAKLTVESVETVNNLISCTIQKIKAAV 781
S+ S C+LT+ FQ + + + + V ++IS ++Q++ A+
Sbjct: 626 SSSSSRCILTIAFQFPFENNLQENVAGMACQYVRSVIS-SVQRVAMAI 672
Score = 40 (19.1 bits), Expect = 9.8e-12, Sum P(4) = 9.8e-12
Identities = 11/33 (33%), Positives = 15/33 (45%)
Query: 737 SGGCLLTVGFQILVNSLPTAKLTVESVETVNNL 769
SG C+ T+G + K+ S E NNL
Sbjct: 797 SGICVSTMGRHVSYEQAVAWKVFAASEENNNNL 829
Score = 39 (18.8 bits), Expect = 9.9e-13, Sum P(4) = 9.9e-13
Identities = 6/10 (60%), Positives = 9/10 (90%)
Query: 702 LLPSGFAILP 711
L+PSGF ++P
Sbjct: 577 LVPSGFRVIP 586
Score = 37 (18.1 bits), Expect = 1.5e-11, Sum P(4) = 1.5e-11
Identities = 7/12 (58%), Positives = 8/12 (66%)
Query: 702 LLPSGFAILPDG 713
L+ GFA LP G
Sbjct: 787 LMQQGFACLPSG 798
>UNIPROTKB|G3V2N3 [details] [associations]
symbol:PRRX1 "Paired mesoderm homeobox protein 1"
species:9606 "Homo sapiens" [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005730 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 EMBL:Z97200 HGNC:HGNC:9142 ChiTaRS:PRRX1
ProteinModelPortal:G3V2N3 SMR:G3V2N3 Ensembl:ENST00000497230
ArrayExpress:G3V2N3 Bgee:G3V2N3 Uniprot:G3V2N3
Length = 200
Score = 150 (57.9 bits), Expect = 1.6e-09, P = 1.6e-09
Identities = 43/138 (31%), Positives = 72/138 (52%)
Query: 36 SLSIKNAMDAGEMG-LIGEQFDPSV--VGRIREEEFESRSGSDNVEGASGDDQEANEDGP 92
+ S+ + +D E G ++ Q D +V GR E SGSD + +DQ +E+
Sbjct: 33 NFSVSHLLDLEEAGDMVAAQADENVGEAGRSLLESPGLTSGSDTPQ--QDNDQLNSEEKK 90
Query: 93 PRKKKYHRHT--PHQIQELESFFKECPHPDEKQRSELSRRLGLESKQIKFWFQNRRTQMK 150
RK++ +R T Q+Q LE F+ +PD R +L+RR+ L +++ WFQNRR + +
Sbjct: 91 KRKQRRNRTTFNSSQLQALERVFERTHYPDAFVREDLARRVNLTEARVQVWFQNRRAKFR 150
Query: 151 TQMERHENIILRQEHDKL 168
R+E +L ++ L
Sbjct: 151 ----RNERAMLANKNASL 164
>TAIR|locus:2202795 [details] [associations]
symbol:AtHB23 "homeobox protein 23" species:3702
"Arabidopsis thaliana" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=ISM;IEA;ISS] [GO:0006355 "regulation
of transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0009739 "response
to gibberellin stimulus" evidence=IEP] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR003106 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 Pfam:PF02183 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009739 GO:GO:0000976
KO:K09338 HOGENOM:HOG000006025 EMBL:AC005508 EMBL:BT009727
EMBL:AK228056 EMBL:AY084913 IPI:IPI00532646 PIR:F86396
RefSeq:NP_564268.1 UniGene:At.43561 ProteinModelPortal:Q8LFD3
SMR:Q8LFD3 STRING:Q8LFD3 PRIDE:Q8LFD3 EnsemblPlants:AT1G26960.1
GeneID:839587 KEGG:ath:AT1G26960 GeneFarm:3956 TAIR:At1g26960
eggNOG:NOG257807 InParanoid:Q8LFD3 OMA:LAFFPEN PhylomeDB:Q8LFD3
ProtClustDB:CLSN2917066 Genevestigator:Q8LFD3 GermOnline:AT1G26960
Uniprot:Q8LFD3
Length = 255
Score = 163 (62.4 bits), Expect = 2.3e-09, P = 2.3e-09
Identities = 42/111 (37%), Positives = 66/111 (59%)
Query: 71 RSGSDNVEGASG-D---DQEANEDGPPRKKKYHRHTPHQIQELESFFKECPHPDEKQRSE 126
RS +NV+G D D+E ++DG +K R Q++ LE F+ + ++ E
Sbjct: 41 RSPMNNVQGFCNLDMNGDEEYSDDGSKMGEKKRRLNMEQLKALEKDFELGNKLESDRKLE 100
Query: 127 LSRRLGLESKQIKFWFQNRRTQMKT-QMERHENIILRQEHDKLRAENEMLK 176
L+R LGL+ +QI WFQNRR + KT Q+E+ +++ RQ + LR ENE+L+
Sbjct: 101 LARALGLQPRQIAIWFQNRRARSKTKQLEKDYDMLKRQ-FESLRDENEVLQ 150
>TAIR|locus:2040520 [details] [associations]
symbol:HB22 "homeobox protein 22" species:3702
"Arabidopsis thaliana" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM;IEA;ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0003700 GO:GO:0006351 EMBL:AC006919 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0000976 KO:K09338 HOGENOM:HOG000006025
EMBL:AC006282 EMBL:DQ056569 IPI:IPI00527137 PIR:E84782
RefSeq:NP_850266.1 UniGene:At.53052 ProteinModelPortal:Q4PSR7
SMR:Q4PSR7 EnsemblPlants:AT2G36610.1 GeneID:818233
KEGG:ath:AT2G36610 GeneFarm:3964 TAIR:At2g36610 eggNOG:NOG297545
InParanoid:Q4PSR7 OMA:MEYWSSS PhylomeDB:Q4PSR7
ProtClustDB:CLSN2918190 Genevestigator:Q4PSR7 GermOnline:AT2G36610
Uniprot:Q4PSR7
Length = 185
Score = 146 (56.5 bits), Expect = 4.4e-09, P = 4.4e-09
Identities = 40/108 (37%), Positives = 63/108 (58%)
Query: 81 SGDDQEANE-DGPPRKKKYHRHTPHQIQELE-SFFKECP-HPDEK------QRSELSRRL 131
SG +E+N +G +KKK + T Q++ LE SF +E +PD K ++ +LS+ L
Sbjct: 56 SGYGEESNSFNGQEKKKK--KMTSEQLKFLERSFQEEIKLNPDRKMKLNPDRKMKLSKEL 113
Query: 132 GLESKQIKFWFQNRRTQMKTQMERHENIILRQEHDKLRAENEMLKDAM 179
GL+ +QI WFQNR+ + K + H LRQE D + E E+L++ +
Sbjct: 114 GLQPRQIAVWFQNRKARWKNKQLEHLYESLRQEFDIVSREKELLQEEL 161
>UNIPROTKB|J9P9S0 [details] [associations]
symbol:PRRX1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 GeneTree:ENSGT00700000104279
CTD:5396 KO:K09329 EMBL:AAEX03005214 EMBL:AAEX03005215
GeneID:609105 KEGG:cfa:609105 RefSeq:XP_862211.1
ProteinModelPortal:J9P9S0 Ensembl:ENSCAFT00000049641 Uniprot:J9P9S0
Length = 217
Score = 153 (58.9 bits), Expect = 7.0e-09, P = 7.0e-09
Identities = 44/138 (31%), Positives = 72/138 (52%)
Query: 36 SLSIKNAMDAGEMG-LIGEQFDPSV--VGRIREEEFESRSGSDNVEGASGDDQEANEDGP 92
+ S+ + +D E G ++ Q D SV GR E SGSD + +DQ +E+
Sbjct: 33 NFSVSHLLDLEEAGDMVAAQADESVGEAGRSLLESPGLTSGSDTPQ--QDNDQLNSEEKK 90
Query: 93 PRKKKYHRHT--PHQIQELESFFKECPHPDEKQRSELSRRLGLESKQIKFWFQNRRTQMK 150
RK++ +R T Q+Q LE F+ +PD R +L+RR+ L +++ WFQNRR + +
Sbjct: 91 KRKQRRNRTTFNSSQLQALERVFERTHYPDAFVREDLARRVNLTEARVQVWFQNRRAKFR 150
Query: 151 TQMERHENIILRQEHDKL 168
R+E +L ++ L
Sbjct: 151 ----RNERAMLANKNASL 164
>UNIPROTKB|Q643W9 [details] [associations]
symbol:Prrx1 "Paired mesoderm homeobox protein 1"
species:10116 "Rattus norvegicus" [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
RGD:628884 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 HOGENOM:HOG000231518
EMBL:CH473958 HOVERGEN:HBG021349 UniGene:Rn.203584 EMBL:AY730764
IPI:IPI00471690 SMR:Q643W9 STRING:Q643W9 Ensembl:ENSRNOT00000042557
Genevestigator:Q643W9 Uniprot:Q643W9
Length = 217
Score = 153 (58.9 bits), Expect = 7.0e-09, P = 7.0e-09
Identities = 44/138 (31%), Positives = 72/138 (52%)
Query: 36 SLSIKNAMDAGEMG-LIGEQFDPSV--VGRIREEEFESRSGSDNVEGASGDDQEANEDGP 92
+ S+ + +D E G ++ Q D SV GR E SGSD + +DQ +E+
Sbjct: 33 NFSVSHLLDLEEAGDMVAAQADESVGEAGRSLLESPGLTSGSDTPQ--QDNDQLNSEEKK 90
Query: 93 PRKKKYHRHT--PHQIQELESFFKECPHPDEKQRSELSRRLGLESKQIKFWFQNRRTQMK 150
RK++ +R T Q+Q LE F+ +PD R +L+RR+ L +++ WFQNRR + +
Sbjct: 91 KRKQRRNRTTFNSSQLQALERVFERTHYPDAFVREDLARRVNLTEARVQVWFQNRRAKFR 150
Query: 151 TQMERHENIILRQEHDKL 168
R+E +L ++ L
Sbjct: 151 ----RNERAMLANKNASL 164
>UNIPROTKB|H0YJ32 [details] [associations]
symbol:SHOX2 "Short stature homeobox protein 2"
species:9606 "Homo sapiens" [GO:0000976 "transcription regulatory
region sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0000976 HGNC:HGNC:10854
EMBL:AC112502 Ensembl:ENST00000555977 Uniprot:H0YJ32
Length = 178
Score = 143 (55.4 bits), Expect = 9.2e-09, P = 9.2e-09
Identities = 31/88 (35%), Positives = 48/88 (54%)
Query: 75 DNVEGASGDDQEANEDGPPRKKKYHRHTPHQIQELESFFKECPHPDEKQRSELSRRLGLE 134
D E A G + E R+ + + T Q+ ELE F E +PD R ELS+RLGL
Sbjct: 26 DRKEDAKGMEDEGQTKIKQRRSRTN-FTLEQLNELERLFDETHYPDAFMREELSQRLGLS 84
Query: 135 SKQIKFWFQNRRTQMKTQMER-HENIIL 161
+++ WFQNRR + + Q + H+ +++
Sbjct: 85 EARVQVWFQNRRAKCRKQENQLHKGVLI 112
>UNIPROTKB|A2VE85 [details] [associations]
symbol:PRRX1 "Paired related homeobox 1" species:9913 "Bos
taurus" [GO:0071837 "HMG box domain binding" evidence=IEA]
[GO:0060021 "palate development" evidence=IEA] [GO:0051216
"cartilage development" evidence=IEA] [GO:0048844 "artery
morphogenesis" evidence=IEA] [GO:0048701 "embryonic cranial
skeleton morphogenesis" evidence=IEA] [GO:0045880 "positive
regulation of smoothened signaling pathway" evidence=IEA]
[GO:0042474 "middle ear morphogenesis" evidence=IEA] [GO:0042472
"inner ear morphogenesis" evidence=IEA] [GO:0030326 "embryonic limb
morphogenesis" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0002053 "positive regulation of mesenchymal cell proliferation"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0042472
GO:GO:0030326 GO:GO:0051216 HOGENOM:HOG000231518 GO:GO:0060021
InterPro:IPR003654 Pfam:PF03826 PROSITE:PS50803 GO:GO:0048844
GO:GO:0048701 GeneTree:ENSGT00700000104279 GO:GO:0002053
GO:GO:0045880 GO:GO:0042474 eggNOG:NOG267226 CTD:5396
HOVERGEN:HBG021349 KO:K09329 OrthoDB:EOG4RR6J8 OMA:WGSAAPY
EMBL:DAAA02042867 EMBL:DAAA02042868 EMBL:BC133623 IPI:IPI00717328
RefSeq:NP_001075208.1 UniGene:Bt.78963 SMR:A2VE85
Ensembl:ENSBTAT00000006003 GeneID:540901 KEGG:bta:540901
InParanoid:A2VE85 NextBio:20878904 Uniprot:A2VE85
Length = 245
Score = 154 (59.3 bits), Expect = 2.2e-08, P = 2.2e-08
Identities = 51/170 (30%), Positives = 81/170 (47%)
Query: 36 SLSIKNAMDAGEMG-LIGEQFDPSV--VGRIREEEFESRSGSDNVEGASGDDQEANEDGP 92
+ S+ + +D E G ++ Q D SV GR E SGSD + +DQ +E+
Sbjct: 33 NFSVSHLLDLEEAGDMVAAQADESVGEAGRSLLESPGLTSGSDTPQ--QDNDQLNSEEKK 90
Query: 93 PRKKKYHRHT--PHQIQELESFFKECPHPDEKQRSELSRRLGLESKQIKFWFQNRRTQMK 150
RK++ +R T Q+Q LE F+ +PD R +L+RR+ L +++ WFQNRR + +
Sbjct: 91 KRKQRRNRTTFNSSQLQALERVFERTHYPDAFVREDLARRVNLTEARVQVWFQNRRAKFR 150
Query: 151 TQ---MERHENIILRQEH--DKLRAENEMLKDAMKNPTCNNCGGPAVPGS 195
M ++N L + + D E ++ PT G A P S
Sbjct: 151 RNERAMLANKNASLLKSYSGDVTAVEQPIVPRPAPRPTDYLSWGTASPYS 200
>UNIPROTKB|E2RGD6 [details] [associations]
symbol:PRRX1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071837 "HMG box domain binding"
evidence=IEA] [GO:0060021 "palate development" evidence=IEA]
[GO:0051216 "cartilage development" evidence=IEA] [GO:0048844
"artery morphogenesis" evidence=IEA] [GO:0048701 "embryonic cranial
skeleton morphogenesis" evidence=IEA] [GO:0045880 "positive
regulation of smoothened signaling pathway" evidence=IEA]
[GO:0042474 "middle ear morphogenesis" evidence=IEA] [GO:0042472
"inner ear morphogenesis" evidence=IEA] [GO:0030326 "embryonic limb
morphogenesis" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0002053 "positive regulation of mesenchymal cell proliferation"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0042472
GO:GO:0030326 GO:GO:0051216 GO:GO:0060021 InterPro:IPR003654
Pfam:PF03826 PROSITE:PS50803 GO:GO:0048844 GO:GO:0048701
GeneTree:ENSGT00700000104279 GO:GO:0002053 GO:GO:0045880
GO:GO:0042474 CTD:5396 KO:K09329 OMA:WGSAAPY EMBL:AAEX03005214
EMBL:AAEX03005215 RefSeq:XP_850725.1 ProteinModelPortal:E2RGD6
SMR:E2RGD6 Ensembl:ENSCAFT00000023797 GeneID:609105 KEGG:cfa:609105
NextBio:20894722 Uniprot:E2RGD6
Length = 245
Score = 154 (59.3 bits), Expect = 2.2e-08, P = 2.2e-08
Identities = 51/170 (30%), Positives = 81/170 (47%)
Query: 36 SLSIKNAMDAGEMG-LIGEQFDPSV--VGRIREEEFESRSGSDNVEGASGDDQEANEDGP 92
+ S+ + +D E G ++ Q D SV GR E SGSD + +DQ +E+
Sbjct: 33 NFSVSHLLDLEEAGDMVAAQADESVGEAGRSLLESPGLTSGSDTPQ--QDNDQLNSEEKK 90
Query: 93 PRKKKYHRHT--PHQIQELESFFKECPHPDEKQRSELSRRLGLESKQIKFWFQNRRTQMK 150
RK++ +R T Q+Q LE F+ +PD R +L+RR+ L +++ WFQNRR + +
Sbjct: 91 KRKQRRNRTTFNSSQLQALERVFERTHYPDAFVREDLARRVNLTEARVQVWFQNRRAKFR 150
Query: 151 TQ---MERHENIILRQEH--DKLRAENEMLKDAMKNPTCNNCGGPAVPGS 195
M ++N L + + D E ++ PT G A P S
Sbjct: 151 RNERAMLANKNASLLKSYSGDVTAVEQPIVPRPAPRPTDYLSWGTASPYS 200
>MGI|MGI:97712 [details] [associations]
symbol:Prrx1 "paired related homeobox 1" species:10090 "Mus
musculus" [GO:0000122 "negative regulation of transcription from
RNA polymerase II promoter" evidence=ISO] [GO:0002053 "positive
regulation of mesenchymal cell proliferation" evidence=IGI]
[GO:0003677 "DNA binding" evidence=IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0030326 "embryonic limb morphogenesis" evidence=IGI]
[GO:0042472 "inner ear morphogenesis" evidence=IGI] [GO:0042474
"middle ear morphogenesis" evidence=IGI;IMP] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0045880 "positive
regulation of smoothened signaling pathway" evidence=IGI]
[GO:0048701 "embryonic cranial skeleton morphogenesis"
evidence=IGI;IMP] [GO:0048704 "embryonic skeletal system
morphogenesis" evidence=IGI;IMP] [GO:0048844 "artery morphogenesis"
evidence=IGI;IMP] [GO:0051216 "cartilage development"
evidence=IGI;IMP] [GO:0060021 "palate development" evidence=IMP]
[GO:0071837 "HMG box domain binding" evidence=IPI]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
MGI:MGI:97712 GO:GO:0005634 GO:GO:0003677 GO:GO:0043565
GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0000122
GO:GO:0042472 GO:GO:0030326 GO:GO:0051216 HOGENOM:HOG000231518
GO:GO:0060021 InterPro:IPR003654 Pfam:PF03826 PROSITE:PS50803
GO:GO:0048844 GO:GO:0048701 GeneTree:ENSGT00700000104279
GO:GO:0002053 GO:GO:0045880 GO:GO:0042474 eggNOG:NOG267226 CTD:5396
HOVERGEN:HBG021349 KO:K09329 OrthoDB:EOG4RR6J8 OMA:WGSAAPY
ChiTaRS:PRRX1 EMBL:L06502 EMBL:U03873 EMBL:X59725 EMBL:BC092372
IPI:IPI00118248 IPI:IPI00230653 PIR:I48902 PIR:S26076
RefSeq:NP_035257.1 RefSeq:NP_783617.2 UniGene:Mm.288642
ProteinModelPortal:P63013 SMR:P63013 IntAct:P63013 STRING:P63013
PhosphoSite:P63013 PRIDE:P63013 Ensembl:ENSMUST00000027878
Ensembl:ENSMUST00000075805 GeneID:18933 KEGG:mmu:18933
UCSC:uc007dhh.1 UCSC:uc007dhi.1 InParanoid:P63013 NextBio:295248
Bgee:P63013 CleanEx:MM_PRRX1 Genevestigator:P63013
GermOnline:ENSMUSG00000026586 Uniprot:P63013
Length = 245
Score = 154 (59.3 bits), Expect = 2.2e-08, P = 2.2e-08
Identities = 51/170 (30%), Positives = 81/170 (47%)
Query: 36 SLSIKNAMDAGEMG-LIGEQFDPSV--VGRIREEEFESRSGSDNVEGASGDDQEANEDGP 92
+ S+ + +D E G ++ Q D SV GR E SGSD + +DQ +E+
Sbjct: 33 NFSVSHLLDLEEAGDMVAAQADESVGEAGRSLLESPGLTSGSDTPQ--QDNDQLNSEEKK 90
Query: 93 PRKKKYHRHT--PHQIQELESFFKECPHPDEKQRSELSRRLGLESKQIKFWFQNRRTQMK 150
RK++ +R T Q+Q LE F+ +PD R +L+RR+ L +++ WFQNRR + +
Sbjct: 91 KRKQRRNRTTFNSSQLQALERVFERTHYPDAFVREDLARRVNLTEARVQVWFQNRRAKFR 150
Query: 151 TQ---MERHENIILRQEH--DKLRAENEMLKDAMKNPTCNNCGGPAVPGS 195
M ++N L + + D E ++ PT G A P S
Sbjct: 151 RNERAMLANKNASLLKSYSGDVTAVEQPIVPRPAPRPTDYLSWGTASPYS 200
>RGD|628884 [details] [associations]
symbol:Prrx1 "paired related homeobox 1" species:10116 "Rattus
norvegicus" [GO:0000122 "negative regulation of transcription from
RNA polymerase II promoter" evidence=IDA] [GO:0002053 "positive
regulation of mesenchymal cell proliferation" evidence=IEA;ISO]
[GO:0003677 "DNA binding" evidence=ISO] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0005730
"nucleolus" evidence=IEA;ISO] [GO:0030326 "embryonic limb
morphogenesis" evidence=IEA;ISO] [GO:0042472 "inner ear
morphogenesis" evidence=IEA;ISO] [GO:0042474 "middle ear
morphogenesis" evidence=IEA;ISO] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0045880 "positive regulation of
smoothened signaling pathway" evidence=IEA;ISO] [GO:0048701
"embryonic cranial skeleton morphogenesis" evidence=IEA;ISO]
[GO:0048704 "embryonic skeletal system morphogenesis" evidence=ISO]
[GO:0048844 "artery morphogenesis" evidence=IEA;ISO] [GO:0051216
"cartilage development" evidence=IEA;ISO] [GO:0060021 "palate
development" evidence=IEA;ISO] [GO:0071837 "HMG box domain binding"
evidence=IEA;ISO] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 RGD:628884 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0000122 GO:GO:0042472
GO:GO:0030326 GO:GO:0051216 HOGENOM:HOG000231518 GO:GO:0060021
InterPro:IPR003654 Pfam:PF03826 PROSITE:PS50803 GO:GO:0048844
GO:GO:0048701 GeneTree:ENSGT00700000104279 GO:GO:0002053
GO:GO:0045880 GO:GO:0042474 eggNOG:NOG267226 CTD:5396
HOVERGEN:HBG021349 KO:K09329 OrthoDB:EOG4RR6J8 OMA:WGSAAPY
EMBL:S82911 IPI:IPI00198569 RefSeq:NP_722543.1 UniGene:Rn.203584
ProteinModelPortal:P63014 SMR:P63014 STRING:P63014
Ensembl:ENSRNOT00000004950 GeneID:266813 KEGG:rno:266813
UCSC:RGD:628884 InParanoid:P63014 NextBio:624741
ArrayExpress:P63014 Genevestigator:P63014
GermOnline:ENSRNOG00000003720 Uniprot:P63014
Length = 245
Score = 154 (59.3 bits), Expect = 2.2e-08, P = 2.2e-08
Identities = 51/170 (30%), Positives = 81/170 (47%)
Query: 36 SLSIKNAMDAGEMG-LIGEQFDPSV--VGRIREEEFESRSGSDNVEGASGDDQEANEDGP 92
+ S+ + +D E G ++ Q D SV GR E SGSD + +DQ +E+
Sbjct: 33 NFSVSHLLDLEEAGDMVAAQADESVGEAGRSLLESPGLTSGSDTPQ--QDNDQLNSEEKK 90
Query: 93 PRKKKYHRHT--PHQIQELESFFKECPHPDEKQRSELSRRLGLESKQIKFWFQNRRTQMK 150
RK++ +R T Q+Q LE F+ +PD R +L+RR+ L +++ WFQNRR + +
Sbjct: 91 KRKQRRNRTTFNSSQLQALERVFERTHYPDAFVREDLARRVNLTEARVQVWFQNRRAKFR 150
Query: 151 TQ---MERHENIILRQEH--DKLRAENEMLKDAMKNPTCNNCGGPAVPGS 195
M ++N L + + D E ++ PT G A P S
Sbjct: 151 RNERAMLANKNASLLKSYSGDVTAVEQPIVPRPAPRPTDYLSWGTASPYS 200
>ZFIN|ZDB-GENE-030131-9033 [details] [associations]
symbol:prrx1b "paired related homeobox 1b"
species:7955 "Danio rerio" [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0010628 "positive regulation of gene expression"
evidence=IMP] [GO:0007275 "multicellular organismal development"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 ZFIN:ZDB-GENE-030131-9033 GO:GO:0007275 GO:GO:0005634
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0010628 HOGENOM:HOG000231518 InterPro:IPR003654 Pfam:PF03826
PROSITE:PS50803 GeneTree:ENSGT00700000104279 HSSP:P10037
eggNOG:NOG267226 HOVERGEN:HBG021349 KO:K09329 OMA:WGSAAPY
EMBL:CU571309 EMBL:BC064671 IPI:IPI00499847 RefSeq:NP_956344.1
UniGene:Dr.76340 SMR:Q6P295 Ensembl:ENSDART00000061588
GeneID:337089 KEGG:dre:337089 CTD:337089 InParanoid:Q6P295
NextBio:20812053 Uniprot:Q6P295
Length = 245
Score = 152 (58.6 bits), Expect = 3.8e-08, P = 3.8e-08
Identities = 43/138 (31%), Positives = 72/138 (52%)
Query: 36 SLSIKNAMDAGEMG-LIGEQFDPSV--VGRIREEEFESRSGSDNVEGASGDDQEANEDGP 92
+ S+ + +D E ++G Q D SV GR E SGSD + ++Q +E+
Sbjct: 35 NFSVSHLLDLEEAREMVGSQVDESVGETGRTMLESPGLTSGSDTTQ--QENEQLNSEEKK 92
Query: 93 PRKKKYHRHT--PHQIQELESFFKECPHPDEKQRSELSRRLGLESKQIKFWFQNRRTQMK 150
RK++ +R T Q+Q LE F+ +PD R +L+RR+ L +++ WFQNRR + +
Sbjct: 93 KRKQRRNRTTFNSSQLQALERVFERTHYPDAFVREDLARRVNLTEARVQVWFQNRRAKFR 152
Query: 151 TQMERHENIILRQEHDKL 168
R+E +L ++ L
Sbjct: 153 ----RNERAMLASKNASL 166
>UNIPROTKB|P54821 [details] [associations]
symbol:PRRX1 "Paired mesoderm homeobox protein 1"
species:9606 "Homo sapiens" [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0002053 "positive regulation of mesenchymal cell
proliferation" evidence=IEA] [GO:0030326 "embryonic limb
morphogenesis" evidence=IEA] [GO:0042472 "inner ear morphogenesis"
evidence=IEA] [GO:0042474 "middle ear morphogenesis" evidence=IEA]
[GO:0045880 "positive regulation of smoothened signaling pathway"
evidence=IEA] [GO:0048701 "embryonic cranial skeleton
morphogenesis" evidence=IEA] [GO:0048844 "artery morphogenesis"
evidence=IEA] [GO:0051216 "cartilage development" evidence=IEA]
[GO:0060021 "palate development" evidence=IEA] [GO:0071837 "HMG box
domain binding" evidence=IEA] [GO:0003713 "transcription
coactivator activity" evidence=TAS] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005730 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0000122 GO:GO:0003713 GO:GO:0042472
GO:GO:0030326 GO:GO:0051216 HOGENOM:HOG000231518 GO:GO:0060021
InterPro:IPR003654 Pfam:PF03826 PROSITE:PS50803 GO:GO:0048844
GO:GO:0048701 GO:GO:0002053 GO:GO:0045880 GO:GO:0042474
eggNOG:NOG267226 CTD:5396 HOVERGEN:HBG021349 KO:K09329
OrthoDB:EOG4RR6J8 EMBL:AB451463 EMBL:Z97200 EMBL:BC074993
EMBL:M95929 IPI:IPI00008822 IPI:IPI00221036 RefSeq:NP_008833.1
RefSeq:NP_073207.1 UniGene:Hs.283416 ProteinModelPortal:P54821
SMR:P54821 STRING:P54821 PhosphoSite:P54821 DMDM:6174916
PRIDE:P54821 DNASU:5396 Ensembl:ENST00000239461
Ensembl:ENST00000367760 GeneID:5396 KEGG:hsa:5396 UCSC:uc001ghe.3
UCSC:uc001ghf.3 GeneCards:GC01P170632 HGNC:HGNC:9142 HPA:HPA051084
MIM:167420 MIM:202650 neXtProt:NX_P54821 Orphanet:990
PharmGKB:PA33466 InParanoid:P54821 OMA:WGSAAPY PhylomeDB:P54821
ChiTaRS:PRRX1 GenomeRNAi:5396 NextBio:20925 ArrayExpress:P54821
Bgee:P54821 CleanEx:HS_PRRX1 Genevestigator:P54821
GermOnline:ENSG00000116132 Uniprot:P54821
Length = 245
Score = 151 (58.2 bits), Expect = 5.1e-08, P = 5.1e-08
Identities = 50/170 (29%), Positives = 81/170 (47%)
Query: 36 SLSIKNAMDAGEMG-LIGEQFDPSV--VGRIREEEFESRSGSDNVEGASGDDQEANEDGP 92
+ S+ + +D E G ++ Q D +V GR E SGSD + +DQ +E+
Sbjct: 33 NFSVSHLLDLEEAGDMVAAQADENVGEAGRSLLESPGLTSGSDTPQ--QDNDQLNSEEKK 90
Query: 93 PRKKKYHRHT--PHQIQELESFFKECPHPDEKQRSELSRRLGLESKQIKFWFQNRRTQMK 150
RK++ +R T Q+Q LE F+ +PD R +L+RR+ L +++ WFQNRR + +
Sbjct: 91 KRKQRRNRTTFNSSQLQALERVFERTHYPDAFVREDLARRVNLTEARVQVWFQNRRAKFR 150
Query: 151 TQ---MERHENIILRQEH--DKLRAENEMLKDAMKNPTCNNCGGPAVPGS 195
M ++N L + + D E ++ PT G A P S
Sbjct: 151 RNERAMLANKNASLLKSYSGDVTAVEQPIVPRPAPRPTDYLSWGTASPYS 200
>UNIPROTKB|F1RUB4 [details] [associations]
symbol:RHOXF1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0019953 "sexual
reproduction" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0019953
OMA:NKRARCR GeneTree:ENSGT00530000063899 EMBL:FP102657
Ensembl:ENSSSCT00000013790 Uniprot:F1RUB4
Length = 181
Score = 134 (52.2 bits), Expect = 8.4e-08, P = 8.4e-08
Identities = 40/125 (32%), Positives = 60/125 (48%)
Query: 44 DAGEMGLIGEQFDP-SVVGRIREEEFESRSGSDNVEGASGDDQE-------ANEDGPPRK 95
+ G+ GL DP + G I +E G D +G E A E PR
Sbjct: 39 EEGDPGLA----DPVNHEGNINQEGDGDHEGGDGGQGPGEQPPEEPGQVAPAAEAPQPRN 94
Query: 96 KKYHR-----HTPHQIQELESFFKECPHPDEKQRSELSRRLGLESKQIKFWFQNRRTQMK 150
++ R TP Q+QELE F+ +PD R EL+RR+ + +++ WF+NRR + +
Sbjct: 95 RRQRRIQRKKFTPVQLQELEGLFQRTQYPDVPTRRELARRMDVTETRVQIWFKNRRAKYR 154
Query: 151 TQMER 155
+MER
Sbjct: 155 -RMER 158
>TAIR|locus:2205075 [details] [associations]
symbol:ATHB13 species:3702 "Arabidopsis thaliana"
[GO:0000976 "transcription regulatory region sequence-specific DNA
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA;ISS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM;IEA;ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;ISS] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA;IDA] [GO:0009744 "response to sucrose
stimulus" evidence=IMP] [GO:0009965 "leaf morphogenesis"
evidence=IMP] [GO:0048826 "cotyledon morphogenesis" evidence=IMP]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR003106
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 Pfam:PF02183
PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009744
GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0009965 GO:GO:0000976 KO:K09338 EMBL:AF208044
EMBL:AC013289 EMBL:AY057572 EMBL:AY133645 EMBL:AY086888
IPI:IPI00519626 PIR:H96719 RefSeq:NP_177136.1 UniGene:At.23736
UniGene:At.68137 ProteinModelPortal:Q8LC03 SMR:Q8LC03 STRING:Q8LC03
PaxDb:Q8LC03 PRIDE:Q8LC03 EnsemblPlants:AT1G69780.1 GeneID:843314
KEGG:ath:AT1G69780 GeneFarm:3958 TAIR:At1g69780 eggNOG:NOG250192
HOGENOM:HOG000006025 InParanoid:Q8LC03 OMA:NPILPSC PhylomeDB:Q8LC03
ProtClustDB:CLSN2682576 Genevestigator:Q8LC03 GO:GO:0048826
Uniprot:Q8LC03
Length = 294
Score = 152 (58.6 bits), Expect = 8.7e-08, P = 8.7e-08
Identities = 33/94 (35%), Positives = 59/94 (62%)
Query: 84 DQEANEDGPPRKKKYHRHTPHQIQELESFFKECPHPDEKQRSELSRRLGLESKQIKFWFQ 143
+++ ++DG +K R Q++ LE F+ + +++ +L+R LGL+ +QI WFQ
Sbjct: 72 EEDYSDDGSQMGEKKRRLNMEQVKTLEKNFELGNKLEPERKMQLARALGLQPRQIAIWFQ 131
Query: 144 NRRTQMKT-QMERHENIILRQEHDKLRAENEMLK 176
NRR + KT Q+E+ + + RQ D L+AEN++L+
Sbjct: 132 NRRARWKTKQLEKDYDTLKRQ-FDTLKAENDLLQ 164
>TAIR|locus:2144578 [details] [associations]
symbol:HB51 "homeobox 51" species:3702 "Arabidopsis
thaliana" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM;IEA;ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA;IDA] [GO:0009965 "leaf
morphogenesis" evidence=IMP] [GO:0010434 "bract formation"
evidence=IGI] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IGI] [GO:0048510 "regulation of timing of
transition from vegetative to reproductive phase" evidence=IGI]
[GO:0010582 "floral meristem determinacy" evidence=IGI] [GO:0048443
"stamen development" evidence=RCA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0045893 GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
EMBL:AB005235 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009965
GO:GO:0048510 GO:GO:0010582 GO:GO:0000976 HOGENOM:HOG000006025
EMBL:AL162506 IPI:IPI00533817 IPI:IPI01019585 PIR:T48406
RefSeq:NP_195999.2 UniGene:At.54712 ProteinModelPortal:Q9LZR0
SMR:Q9LZR0 GeneID:831723 KEGG:ath:AT5G03790 GeneFarm:3983
TAIR:At5g03790 eggNOG:KOG0483 InParanoid:Q9LZR0 OMA:AHPRTEN
ArrayExpress:Q9LZR0 Genevestigator:Q9LZR0 GermOnline:AT5G03790
GO:GO:0010434 Uniprot:Q9LZR0
Length = 235
Score = 148 (57.2 bits), Expect = 9.1e-08, P = 9.1e-08
Identities = 39/94 (41%), Positives = 55/94 (58%)
Query: 88 NEDGPPRKKKYHRHTPHQIQELESFFKECPHPDEKQRSELSRRLGLESKQIKFWFQNRRT 147
N + KKK R T Q+ LE F+E D ++ +LSR LGL+ +QI WFQNRR
Sbjct: 70 NNNNEMIKKK--RLTSGQLASLERSFQEEIKLDSDRKVKLSRELGLQPRQIAVWFQNRRA 127
Query: 148 QMKT-QMERHENIILRQEHDKLRAENEMLKDAMK 180
+ K Q+E+ + LRQE+D + E +ML D +K
Sbjct: 128 RWKAKQLEQLYDS-LRQEYDVVSREKQMLHDEVK 160
>UNIPROTKB|G3X7M1 [details] [associations]
symbol:SHOX "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 InterPro:IPR003654 Pfam:PF03826 PROSITE:PS50803
GO:GO:0000976 GeneTree:ENSGT00700000104279 KO:K09331 CTD:6473
OMA:SNHCPVH EMBL:DAAA02005893 RefSeq:NP_001178475.1
UniGene:Bt.106108 Ensembl:ENSBTAT00000038279 GeneID:615159
KEGG:bta:615159 NextBio:20899478 Uniprot:G3X7M1
Length = 306
Score = 152 (58.6 bits), Expect = 9.9e-08, P = 9.9e-08
Identities = 56/191 (29%), Positives = 85/191 (44%)
Query: 4 GSNSVGMGSRVVAEIFPHCHSMASGAIAQFPLSLSIKNAMDAGEMG--LIGEQFDPSV-V 60
GS G G + E + + SG L +S N D E G F V
Sbjct: 23 GSGGGGGGKK---ESITYREVLESGLARSRELGVSESNLHDITEAGGHCPVHLFKDHVDT 79
Query: 61 GRIREEEFESRSGSDNVEGASG--DDQEA-NEDGPPRKKKYHRHTP---HQIQELESFFK 114
+ + +EF S ++ + DD ++ +EDG + K+ T Q+ ELE F
Sbjct: 80 EKDKLKEFGSGRAAEGIYDCKDKRDDVKSEDEDGQTKLKQRRSRTNFTLEQLNELERLFD 139
Query: 115 ECPHPDEKQRSELSRRLGLESKQIKFWFQNRRTQMKTQMER-HENIIL-RQEH-DKLRAE 171
E +PD R ELS+RLGL +++ WFQNRR + + Q + H ++IL H D R
Sbjct: 140 ETHYPDAFMREELSQRLGLSEARVQVWFQNRRAKCRKQENQMHNSVILGTASHLDACRVA 199
Query: 172 NEMLKDAMKNP 182
+ A++ P
Sbjct: 200 PYVNMGALRMP 210
>UNIPROTKB|H0YLI9 [details] [associations]
symbol:SHOX "Short stature homeobox protein" species:9606
"Homo sapiens" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0000976 EMBL:BX004827
HGNC:HGNC:10853 ProteinModelPortal:H0YLI9 SMR:H0YLI9
Ensembl:ENST00000558872 Bgee:H0YLI9 Uniprot:H0YLI9
Length = 225
Score = 146 (56.5 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 37/106 (34%), Positives = 55/106 (51%)
Query: 83 DDQEANEDGPPRKKKYHRHTP---HQIQELESFFKECPHPDEKQRSELSRRLGLESKQIK 139
D + +EDG + K+ T Q+ ELE F E +PD R ELS+RLGL +++
Sbjct: 103 DVKSEDEDGQTKLKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQ 162
Query: 140 FWFQNRRTQMKTQMER-HENIIL-RQEH-DKLRAENEMLKDAMKNP 182
WFQNRR + + Q + H+ +IL H D R + A++ P
Sbjct: 163 VWFQNRRAKCRKQENQMHKGVILGTANHLDACRVAPYVNMGALRMP 208
>ZFIN|ZDB-GENE-051030-21 [details] [associations]
symbol:shox "short stature homeobox" species:7955
"Danio rerio" [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0000976
"transcription regulatory region sequence-specific DNA binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
ZFIN:ZDB-GENE-051030-21 GO:GO:0005634 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0000976
GeneTree:ENSGT00700000104279 EMBL:BX294669 IPI:IPI00742503
Ensembl:ENSDART00000029238 ArrayExpress:F1Q5T6 Bgee:F1Q5T6
Uniprot:F1Q5T6
Length = 304
Score = 151 (58.2 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 37/111 (33%), Positives = 57/111 (51%)
Query: 75 DNVEGASGDDQEANEDGPPRKKKYHRHTPHQIQELESFFKECPHPDEKQRSELSRRLGLE 134
D E +D++A R+ + + T Q+ ELE F E +PD R ELS+RLGL
Sbjct: 91 DKKEDVKSEDEDAQSKLKQRRSRTN-FTLEQLNELERLFDETHYPDAFMREELSQRLGLS 149
Query: 135 SKQIKFWFQNRRTQMKTQMER-HENIIL-RQEH-DKLRAENEMLKDAMKNP 182
+++ WFQNRR + + Q + H+ +IL H D R + A++ P
Sbjct: 150 EARVQVWFQNRRAKCRKQENQMHKGVILGTASHLDACRVAPYVNMGALRMP 200
>FB|FBgn0025334 [details] [associations]
symbol:PHDP "Putative homeodomain protein" species:7227
"Drosophila melanogaster" [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 EMBL:AE013599 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689 HSSP:P06601
GeneTree:ENSGT00700000104256 FlyBase:FBgn0025334 EMBL:BT028839
RefSeq:NP_523834.1 UniGene:Dm.5689 SMR:Q9W1H7 IntAct:Q9W1H7
MINT:MINT-1561397 STRING:Q9W1H7 EnsemblMetazoa:FBtr0072224
GeneID:37788 KEGG:dme:Dmel_CG11182 UCSC:CG11182-RA CTD:37788
InParanoid:Q9W1H7 OMA:YKLRANE GenomeRNAi:37788 NextBio:805410
Uniprot:Q9W1H7
Length = 220
Score = 144 (55.7 bits), Expect = 1.7e-07, P = 1.7e-07
Identities = 38/122 (31%), Positives = 61/122 (50%)
Query: 82 GDDQEANEDGPPRKKKYHRHTPHQIQELESFFKECPHPDEKQRSELSRRLGLESKQIKFW 141
GDD + D +++ T +Q+ ELE F E +PD R E++ +L L +++ W
Sbjct: 100 GDDGLSLTDKSKQRRIRTTFTSNQLNELEKIFLETHYPDIYTREEIASKLHLTEARVQVW 159
Query: 142 FQNRRTQMKTQMERHENIILRQEHDKLRAENEMLKDAMKNPTCNNCG-GPAVPGSVSNYE 200
FQNRR + + Q ERH I++ + KL D KNP + GP++ G + +
Sbjct: 160 FQNRRAKFRKQ-ERHAIYIMKDKSSKL--------DGRKNPVAGSKYLGPSLKGPQNGHG 210
Query: 201 LQ 202
Q
Sbjct: 211 RQ 212
>UNIPROTKB|F1Q361 [details] [associations]
symbol:SHOX "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 InterPro:IPR003654 Pfam:PF03826 PROSITE:PS50803
GO:GO:0000976 GeneTree:ENSGT00700000104279 OMA:SNHCPVH
EMBL:AAEX03026084 Ensembl:ENSCAFT00000017459 Uniprot:F1Q361
Length = 291
Score = 149 (57.5 bits), Expect = 1.9e-07, P = 1.9e-07
Identities = 39/125 (31%), Positives = 64/125 (51%)
Query: 61 GRIREEEFESRSGSDNVEGASGDDQEANEDGPPRKKKYHRHTPHQIQELESFFKECPHPD 120
GR E +E + ++V+ +D++ R+ + + T Q+ ELE F E +PD
Sbjct: 87 GRAAEGVYECKEKREDVKS---EDEDGQTKLKQRRSRTN-FTLEQLNELERLFDETHYPD 142
Query: 121 EKQRSELSRRLGLESKQIKFWFQNRRTQMKTQMER-HENIIL-RQEH-DKLRAENEMLKD 177
R ELS+RLGL +++ WFQNRR + + Q + H+ +IL H D R +
Sbjct: 143 AFMREELSQRLGLSEARVQVWFQNRRAKCRKQENQMHKGVILGTASHLDACRVAPYVNMG 202
Query: 178 AMKNP 182
A++ P
Sbjct: 203 ALRMP 207
>UNIPROTKB|F1SHT7 [details] [associations]
symbol:HOXA11 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0060351 "cartilage development involved in endochondral
bone morphogenesis" evidence=IEA] [GO:0060272 "embryonic skeletal
joint morphogenesis" evidence=IEA] [GO:0048589 "developmental
growth" evidence=IEA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0042733 "embryonic
digit morphogenesis" evidence=IEA] [GO:0032993 "protein-DNA
complex" evidence=IEA] [GO:0032332 "positive regulation of
chondrocyte differentiation" evidence=IEA] [GO:0010720 "positive
regulation of cell development" evidence=IEA] [GO:0009954
"proximal/distal pattern formation" evidence=IEA] [GO:0009953
"dorsal/ventral pattern formation" evidence=IEA] [GO:0009952
"anterior/posterior pattern specification" evidence=IEA]
[GO:0007501 "mesodermal cell fate specification" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0005667 "transcription factor complex"
evidence=IEA] [GO:0001759 "organ induction" evidence=IEA]
[GO:0001658 "branching involved in ureteric bud morphogenesis"
evidence=IEA] [GO:0001656 "metanephros development" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005737 GO:GO:0045893 GO:GO:0005730
GO:GO:0009952 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0005667
GO:GO:0007501 GO:GO:0032332 GO:GO:0048589 GO:GO:0009953
GO:GO:0009954 GO:GO:0042733 GO:GO:0001658 GO:GO:0001656
GO:GO:0032993 GO:GO:0001759 GO:GO:0060351 OMA:GGCRETA GO:GO:0010720
InterPro:IPR021918 Pfam:PF12045 GeneTree:ENSGT00700000104263
EMBL:CU570959 EMBL:CU480612 Ensembl:ENSSSCT00000018179
Uniprot:F1SHT7
Length = 316
Score = 149 (57.5 bits), Expect = 2.4e-07, P = 2.4e-07
Identities = 49/158 (31%), Positives = 71/158 (44%)
Query: 3 FGSNSVGMGSRVVAEIFPHCHSMASGAIAQFPLSLSIKNAMDAGEMGLIGEQFDPSVVGR 62
F + G + + +P S GA A S + A A G S G
Sbjct: 143 FFETAYGTPENLASSDYPGDKSTEKGAPAAAATSAAAAAAAAAAATGTPATSSSDSGAGG 202
Query: 63 IRE-----EEFESR---SGSDNVEGASG--DDQEANEDGPPRKKKYHRHTPHQIQELESF 112
RE EE E R S + E +SG +D+ G +KK +T +QI+ELE
Sbjct: 203 CREAAAAAEEKERRRRPESSSSPESSSGHTEDKAGGSSGQRTRKKRCPYTKYQIRELERE 262
Query: 113 FKECPHPDEKQRSELSRRLGLESKQIKFWFQNRRTQMK 150
F + ++++R +LSR L L +Q+K WFQNRR + K
Sbjct: 263 FFFSVYINKEKRLQLSRMLNLTDRQVKIWFQNRRMKEK 300
>UNIPROTKB|Q8N693 [details] [associations]
symbol:ESX1 "Homeobox protein ESX1" species:9606 "Homo
sapiens" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IDA] [GO:0043565
"sequence-specific DNA binding" evidence=IDA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0051726
"regulation of cell cycle" evidence=IDA] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0005737
GO:GO:0045892 GO:GO:0043565 GO:GO:0003700 GO:GO:0006357
GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0051726
EMBL:CH471120 GO:GO:0060716 InterPro:IPR013847 PRINTS:PR00028
GO:GO:0060713 EMBL:AY114148 EMBL:AL049631 EMBL:BC042633
EMBL:BC053599 IPI:IPI00166966 RefSeq:NP_703149.1 UniGene:Hs.223782
ProteinModelPortal:Q8N693 SMR:Q8N693 IntAct:Q8N693 STRING:Q8N693
PhosphoSite:Q8N693 DMDM:116241356 PRIDE:Q8N693
Ensembl:ENST00000372588 GeneID:80712 KEGG:hsa:80712 UCSC:uc004ely.3
CTD:80712 GeneCards:GC0XM103494 HGNC:HGNC:14865 HPA:HPA051992
MIM:300154 neXtProt:NX_Q8N693 PharmGKB:PA27892 eggNOG:NOG264325
HOGENOM:HOG000198273 HOVERGEN:HBG084082 InParanoid:Q8N693
OMA:MAPVPPW OrthoDB:EOG4MKNHC PhylomeDB:Q8N693 GenomeRNAi:80712
NextBio:71013 ArrayExpress:Q8N693 Bgee:Q8N693 CleanEx:HS_ESX1
Genevestigator:Q8N693 GermOnline:ENSG00000123576 Uniprot:Q8N693
Length = 406
Score = 151 (58.2 bits), Expect = 2.6e-07, P = 2.6e-07
Identities = 35/100 (35%), Positives = 55/100 (55%)
Query: 53 EQFDPSVVGRIREEEFESRSGSDNVEGASGDDQEANEDGPPRKKKYHR--HTPHQIQELE 110
+Q +P ++ +E+E ++ + + A G Q A PP +K+ R T Q+QELE
Sbjct: 97 QQEEPPLLELKQEQEEPPQTTVEGPQPAEGP-QTAEGPQPPERKRRRRTAFTQFQLQELE 155
Query: 111 SFFKECPHPDEKQRSELSRRLGLESKQIKFWFQNRRTQMK 150
+FF E +PD R L+ RL L +++ WFQNRR + K
Sbjct: 156 NFFDESQYPDVVARERLAARLNLTEDRVQVWFQNRRAKWK 195
>UNIPROTKB|F1NYF2 [details] [associations]
symbol:NKX6-2 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0010454 "negative regulation of cell fate
commitment" evidence=IEA] [GO:0010455 "positive regulation of cell
fate commitment" evidence=IEA] [GO:0021912 "regulation of
transcription from RNA polymerase II promoter involved in spinal
cord motor neuron fate specification" evidence=IEA] [GO:0021913
"regulation of transcription from RNA polymerase II promoter
involved in ventral spinal cord interneuron specification"
evidence=IEA] [GO:0022010 "central nervous system myelination"
evidence=IEA] [GO:0031018 "endocrine pancreas development"
evidence=IEA] [GO:0045686 "negative regulation of glial cell
differentiation" evidence=IEA] [GO:0045687 "positive regulation of
glial cell differentiation" evidence=IEA] [GO:0050885
"neuromuscular process controlling balance" evidence=IEA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0030154
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0000122 GO:GO:0000976
GeneTree:ENSGT00680000099625 GO:GO:0010455 GO:GO:0010454
EMBL:AADN02047157 EMBL:AADN02047158 IPI:IPI00600245
Ensembl:ENSGALT00000018301 Uniprot:F1NYF2
Length = 133
Score = 129 (50.5 bits), Expect = 2.9e-07, P = 2.9e-07
Identities = 38/112 (33%), Positives = 59/112 (52%)
Query: 88 NEDGPPRKKKYHRHT--PHQIQELESFFKECPHPDEKQRSELSRRLGLESKQIKFWFQNR 145
++DG KKK+ R T QI LE F++ + +R+ L+ LG+ Q+K WFQNR
Sbjct: 18 DKDG---KKKHSRPTFSGQQIFALEKTFEQTKYLAGPERARLAYSLGMTESQVKVWFQNR 74
Query: 146 RTQMKTQMERH--ENIILRQEHDKLRAENEMLKDAMKNPTCNNCGGPAVPGS 195
RT+ + +RH E +++HD +E E LK++ N + P P S
Sbjct: 75 RTKWR---KRHAAEMASAKKKHD---SETEKLKESSDNEDDDEYNKPLDPNS 120
>UNIPROTKB|K7GS77 [details] [associations]
symbol:LOC100520816 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR003654
Pfam:PF03826 PROSITE:PS50803 GeneTree:ENSGT00700000104279
EMBL:FP015869 GeneID:100520816 RefSeq:XP_003134962.1
Ensembl:ENSSSCT00000035048 Uniprot:K7GS77
Length = 292
Score = 147 (56.8 bits), Expect = 3.1e-07, P = 3.1e-07
Identities = 39/125 (31%), Positives = 62/125 (49%)
Query: 61 GRIREEEFESRSGSDNVEGASGDDQEANEDGPPRKKKYHRHTPHQIQELESFFKECPHPD 120
GR E ++ + D E +D++ R+ + + T Q+ ELE F E +PD
Sbjct: 88 GRAAEGIYDCK---DKREDVKSEDEDGQTKLKQRRSRTN-FTLEQLNELERLFDETHYPD 143
Query: 121 EKQRSELSRRLGLESKQIKFWFQNRRTQMKTQMER-HENIIL-RQEH-DKLRAENEMLKD 177
R ELS+RLGL +++ WFQNRR + + Q + H+ +IL H D R +
Sbjct: 144 AFMREELSQRLGLSEARVQVWFQNRRAKCRKQENQMHKGVILGTASHLDACRVAPYVNMG 203
Query: 178 AMKNP 182
A++ P
Sbjct: 204 ALRMP 208
>TAIR|locus:2062754 [details] [associations]
symbol:HB-7 "homeobox 7" species:3702 "Arabidopsis
thaliana" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM;IEA;ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IDA]
[GO:0009409 "response to cold" evidence=RCA] [GO:0009414 "response
to water deprivation" evidence=IEP;RCA] [GO:0009737 "response to
abscisic acid stimulus" evidence=IEP;RCA] [GO:0009738 "abscisic
acid mediated signaling pathway" evidence=IGI;RCA] [GO:0042538
"hyperosmotic salinity response" evidence=RCA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR003106 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 Pfam:PF02183 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
GO:GO:0045893 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0009738
GO:GO:0009414 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0000976 eggNOG:NOG252905 HOGENOM:HOG000006310
ProtClustDB:CLSN2683559 EMBL:X67032 EMBL:AC005819 EMBL:AY045826
EMBL:AY091364 IPI:IPI00544746 PIR:H84905 PIR:S47137
RefSeq:NP_182191.1 UniGene:At.136 ProteinModelPortal:P46897
SMR:P46897 STRING:P46897 EnsemblPlants:AT2G46680.1 GeneID:819280
KEGG:ath:AT2G46680 GeneFarm:3966 TAIR:At2g46680 InParanoid:P46897
OMA:THHESEN PhylomeDB:P46897 Genevestigator:P46897 Uniprot:P46897
Length = 258
Score = 145 (56.1 bits), Expect = 3.4e-07, P = 3.4e-07
Identities = 31/83 (37%), Positives = 50/83 (60%)
Query: 95 KKKYHRHTPHQIQELESFFKECPHPDEKQRSELSRRLGLESKQIKFWFQNRRTQMKT-QM 153
K R + QI+ LE F+ + +++ +L+R LGL+ +Q+ WFQN+R + K+ Q+
Sbjct: 30 KNNQRRFSDEQIKSLEMMFESETRLEPRKKVQLARELGLQPRQVAIWFQNKRARWKSKQL 89
Query: 154 ERHENIILRQEHDKLRAENEMLK 176
E NI LRQ +D L ++ E LK
Sbjct: 90 ETEYNI-LRQNYDNLASQFESLK 111
>UNIPROTKB|F1SG33 [details] [associations]
symbol:LOC100520816 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 InterPro:IPR003654 Pfam:PF03826 PROSITE:PS50803
GO:GO:0000976 GeneTree:ENSGT00700000104279 KO:K09331 OMA:SNHCPVH
EMBL:FP015869 RefSeq:XP_003134961.1 Ensembl:ENSSSCT00000013224
GeneID:100520816 KEGG:ssc:100520816 Uniprot:F1SG33
Length = 300
Score = 147 (56.8 bits), Expect = 3.4e-07, P = 3.4e-07
Identities = 39/125 (31%), Positives = 62/125 (49%)
Query: 61 GRIREEEFESRSGSDNVEGASGDDQEANEDGPPRKKKYHRHTPHQIQELESFFKECPHPD 120
GR E ++ + D E +D++ R+ + + T Q+ ELE F E +PD
Sbjct: 88 GRAAEGIYDCK---DKREDVKSEDEDGQTKLKQRRSRTN-FTLEQLNELERLFDETHYPD 143
Query: 121 EKQRSELSRRLGLESKQIKFWFQNRRTQMKTQMER-HENIIL-RQEH-DKLRAENEMLKD 177
R ELS+RLGL +++ WFQNRR + + Q + H+ +IL H D R +
Sbjct: 144 AFMREELSQRLGLSEARVQVWFQNRRAKCRKQENQMHKGVILGTASHLDACRVAPYVNMG 203
Query: 178 AMKNP 182
A++ P
Sbjct: 204 ALRMP 208
>UNIPROTKB|H0YMR3 [details] [associations]
symbol:SHOX "Short stature homeobox protein" species:9606
"Homo sapiens" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0000976 EMBL:BX004827
HGNC:HGNC:10853 ProteinModelPortal:H0YMR3 SMR:H0YMR3
Ensembl:ENST00000560001 Bgee:H0YMR3 Uniprot:H0YMR3
Length = 279
Score = 146 (56.5 bits), Expect = 3.5e-07, P = 3.5e-07
Identities = 37/106 (34%), Positives = 55/106 (51%)
Query: 83 DDQEANEDGPPRKKKYHRHTP---HQIQELESFFKECPHPDEKQRSELSRRLGLESKQIK 139
D + +EDG + K+ T Q+ ELE F E +PD R ELS+RLGL +++
Sbjct: 103 DVKSEDEDGQTKLKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQ 162
Query: 140 FWFQNRRTQMKTQMER-HENIIL-RQEH-DKLRAENEMLKDAMKNP 182
WFQNRR + + Q + H+ +IL H D R + A++ P
Sbjct: 163 VWFQNRRAKCRKQENQMHKGVILGTANHLDACRVAPYVNMGALRMP 208
>MGI|MGI:98218 [details] [associations]
symbol:Prrx2 "paired related homeobox 2" species:10090 "Mus
musculus" [GO:0002053 "positive regulation of mesenchymal cell
proliferation" evidence=IGI] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0030326 "embryonic limb
morphogenesis" evidence=IGI] [GO:0042472 "inner ear morphogenesis"
evidence=IGI] [GO:0042474 "middle ear morphogenesis" evidence=IGI]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0045880 "positive regulation of smoothened signaling pathway"
evidence=IGI] [GO:0048701 "embryonic cranial skeleton
morphogenesis" evidence=IGI] [GO:0048704 "embryonic skeletal system
morphogenesis" evidence=IGI] [GO:0048844 "artery morphogenesis"
evidence=IGI] [GO:0051216 "cartilage development" evidence=IGI]
[GO:0071837 "HMG box domain binding" evidence=IPI]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
MGI:MGI:98218 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0042472 GO:GO:0030326
GO:GO:0051216 HOGENOM:HOG000231518 InterPro:IPR003654 Pfam:PF03826
PROSITE:PS50803 GO:GO:0048844 GO:GO:0048701 GO:GO:0002053
GO:GO:0045880 GO:GO:0042474 HOVERGEN:HBG021349 KO:K09329
eggNOG:NOG309174 CTD:51450 EMBL:X52875 EMBL:X14572 IPI:IPI00319581
PIR:I48410 RefSeq:NP_033142.2 UniGene:Mm.1802
ProteinModelPortal:Q06348 SMR:Q06348 MINT:MINT-1782155
STRING:Q06348 PhosphoSite:Q06348 PRIDE:Q06348 GeneID:20204
KEGG:mmu:20204 InParanoid:Q06348 NextBio:297791 CleanEx:MM_PRRX2
Genevestigator:Q06348 GermOnline:ENSMUSG00000039476 Uniprot:Q06348
Length = 247
Score = 144 (55.7 bits), Expect = 3.7e-07, P = 3.7e-07
Identities = 42/133 (31%), Positives = 61/133 (45%)
Query: 26 ASGAIAQFPLSLSIKNAMDAGEMGLIGEQFDPSVVGRIREEEFESRS---GSDNVEGASG 82
A G AQ + S+ + +D E+ G + V G +R GS E A
Sbjct: 22 APGDCAQARKNFSVSHLLDLEEVAAAGRRAAGPVSGPAEARVGAAREPSGGSSGTEAAPQ 81
Query: 83 D-DQEANEDGPPRKKKYHRH----TPHQIQELESFFKECPHPDEKQRSELSRRLGLESKQ 137
D D + G RKKK R+ Q+Q LE F+ +PD R EL+RR+ L +
Sbjct: 82 DGDCPSPGRGTKRKKKQRRNRTTFNSSQLQALERVFERTHYPDAFVREELARRVNLSEAR 141
Query: 138 IKFWFQNRRTQMK 150
++ WFQNRR + +
Sbjct: 142 VQVWFQNRRAKFR 154
>RGD|3674 [details] [associations]
symbol:Shox2 "short stature homeobox 2" species:10116 "Rattus
norvegicus" [GO:0000122 "negative regulation of transcription from
RNA polymerase II promoter" evidence=IEA;ISO] [GO:0000976
"transcription regulatory region sequence-specific DNA binding"
evidence=IEA] [GO:0001649 "osteoblast differentiation"
evidence=IEA;ISO] [GO:0002053 "positive regulation of mesenchymal
cell proliferation" evidence=IEA;ISO] [GO:0002062 "chondrocyte
differentiation" evidence=ISO] [GO:0002063 "chondrocyte development"
evidence=IEA;ISO] [GO:0003170 "heart valve development"
evidence=IEA;ISO] [GO:0003209 "cardiac atrium morphogenesis"
evidence=IEA;ISO] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0030326 "embryonic limb morphogenesis"
evidence=IEA;ISO] [GO:0032330 "regulation of chondrocyte
differentiation" evidence=IEA;ISO] [GO:0035115 "embryonic forelimb
morphogenesis" evidence=ISO] [GO:0045880 "positive regulation of
smoothened signaling pathway" evidence=IEA;ISO] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA;ISO] [GO:0048557 "embryonic digestive tract
morphogenesis" evidence=IEA;ISO] [GO:0048598 "embryonic
morphogenesis" evidence=ISO] [GO:0048743 "positive regulation of
skeletal muscle fiber development" evidence=IEA;ISO] [GO:0050772
"positive regulation of axonogenesis" evidence=IEA;ISO] [GO:0060272
"embryonic skeletal joint morphogenesis" evidence=IEA;ISO]
[GO:0060351 "cartilage development involved in endochondral bone
morphogenesis" evidence=IEA;ISO] [GO:0060415 "muscle tissue
morphogenesis" evidence=IEA;ISO] [GO:2000172 "regulation of branching
morphogenesis of a nerve" evidence=IEA;ISO] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046
PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 RGD:3674
GO:GO:0005634 GO:GO:0045944 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0000122 GO:GO:0030326 GO:GO:0050772
GO:GO:0032330 GO:GO:0001649 HOGENOM:HOG000231518 InterPro:IPR003654
Pfam:PF03826 PROSITE:PS50803 GO:GO:0000976 GO:GO:0060272
GO:GO:0002053 GO:GO:0048743 GO:GO:0060351 GO:GO:0002063 GO:GO:0045880
GO:GO:0003209 GO:GO:0048557 GO:GO:0060415 GO:GO:2000172 CTD:6474
eggNOG:NOG113578 HOVERGEN:HBG007233 KO:K09331 OrthoDB:EOG41C6X2
GO:GO:0003170 EMBL:AJ002258 EMBL:AJ002259 EMBL:AJ002260
IPI:IPI00231489 IPI:IPI00559825 RefSeq:NP_037160.1 UniGene:Rn.11258
ProteinModelPortal:O35750 SMR:O35750 STRING:O35750 GeneID:25546
KEGG:rno:25546 UCSC:RGD:3674 InParanoid:O35750 NextBio:607081
Genevestigator:O35750 GermOnline:ENSRNOG00000012478 Uniprot:O35750
Length = 237
Score = 143 (55.4 bits), Expect = 3.9e-07, P = 3.9e-07
Identities = 31/88 (35%), Positives = 48/88 (54%)
Query: 75 DNVEGASGDDQEANEDGPPRKKKYHRHTPHQIQELESFFKECPHPDEKQRSELSRRLGLE 134
D E A G + E R+ + + T Q+ ELE F E +PD R ELS+RLGL
Sbjct: 28 DRKEDAKGMEDEGQTKIKQRRSRTN-FTLEQLNELERLFDETHYPDAFMREELSQRLGLS 86
Query: 135 SKQIKFWFQNRRTQMKTQMER-HENIIL 161
+++ WFQNRR + + Q + H+ +++
Sbjct: 87 EARVQVWFQNRRAKCRKQENQLHKGVLI 114
>UNIPROTKB|O35750 [details] [associations]
symbol:Shox2 "Short stature homeobox protein 2"
species:10116 "Rattus norvegicus" [GO:0000976 "transcription
regulatory region sequence-specific DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 RGD:3674 GO:GO:0005634 GO:GO:0045944
GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0000122
GO:GO:0030326 GO:GO:0050772 GO:GO:0032330 GO:GO:0001649
HOGENOM:HOG000231518 InterPro:IPR003654 Pfam:PF03826
PROSITE:PS50803 GO:GO:0000976 GO:GO:0060272 GO:GO:0002053
GO:GO:0048743 GO:GO:0060351 GO:GO:0002063 GO:GO:0045880
GO:GO:0003209 GO:GO:0048557 GO:GO:0060415 GO:GO:2000172 CTD:6474
eggNOG:NOG113578 HOVERGEN:HBG007233 KO:K09331 OrthoDB:EOG41C6X2
GO:GO:0003170 EMBL:AJ002258 EMBL:AJ002259 EMBL:AJ002260
IPI:IPI00231489 IPI:IPI00559825 RefSeq:NP_037160.1 UniGene:Rn.11258
ProteinModelPortal:O35750 SMR:O35750 STRING:O35750 GeneID:25546
KEGG:rno:25546 UCSC:RGD:3674 InParanoid:O35750 NextBio:607081
Genevestigator:O35750 GermOnline:ENSRNOG00000012478 Uniprot:O35750
Length = 237
Score = 143 (55.4 bits), Expect = 3.9e-07, P = 3.9e-07
Identities = 31/88 (35%), Positives = 48/88 (54%)
Query: 75 DNVEGASGDDQEANEDGPPRKKKYHRHTPHQIQELESFFKECPHPDEKQRSELSRRLGLE 134
D E A G + E R+ + + T Q+ ELE F E +PD R ELS+RLGL
Sbjct: 28 DRKEDAKGMEDEGQTKIKQRRSRTN-FTLEQLNELERLFDETHYPDAFMREELSQRLGLS 86
Query: 135 SKQIKFWFQNRRTQMKTQMER-HENIIL 161
+++ WFQNRR + + Q + H+ +++
Sbjct: 87 EARVQVWFQNRRAKCRKQENQLHKGVLI 114
>TAIR|locus:2055028 [details] [associations]
symbol:HB4 "homeobox-leucine zipper protein 4"
species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM;IEA;ISS] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS;IMP] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0009641 "shade
avoidance" evidence=IEP] [GO:0009725 "response to hormone stimulus"
evidence=IMP] [GO:0009506 "plasmodesma" evidence=IDA] [GO:0010218
"response to far red light" evidence=IEP] InterPro:IPR001356
InterPro:IPR003106 InterPro:IPR006712 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 Pfam:PF02183 Pfam:PF04618
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00340 SMART:SM00389
GO:GO:0009506 GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 GO:GO:0010218
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009725 EMBL:AC002388
KO:K09338 HOGENOM:HOG000241612 EMBL:Y09582 EMBL:AJ441251
IPI:IPI00540244 PIR:T00402 RefSeq:NP_182018.1 UniGene:At.44957
ProteinModelPortal:P92953 SMR:P92953 PaxDb:P92953 PRIDE:P92953
EnsemblPlants:AT2G44910.1 GeneID:819100 KEGG:ath:AT2G44910
GeneFarm:3965 TAIR:At2g44910 eggNOG:NOG279137 InParanoid:P92953
OMA:RGGDENE PhylomeDB:P92953 ProtClustDB:CLSN2683322
ArrayExpress:P92953 Genevestigator:P92953 GermOnline:AT2G44910
GO:GO:0009641 Uniprot:P92953
Length = 318
Score = 147 (56.8 bits), Expect = 4.0e-07, P = 4.0e-07
Identities = 43/153 (28%), Positives = 74/153 (48%)
Query: 24 SMASGAIAQFPLSLSIKNAMDAGEMGLIGEQFDPSVVGRIREEEFESRSGSDNVEGASGD 83
+ +S A+ ++ ++ ++ L G + D +V E E E R+ G+ G
Sbjct: 92 AQSSVAVVDLEEEAAVVSSPNSAVSSLSGNKRDLAVARGGDENEAE-RASCSRGGGSGGS 150
Query: 84 DQEANEDGPPRKKKYHRHTPHQIQELESFFKECPHPDEKQRSELSRRLGLESKQIKFWFQ 143
D E +G +KK R + Q LE FKE + KQ+ L+++L L ++Q++ WFQ
Sbjct: 151 DDEDGGNGDGSRKKL-RLSKDQALVLEETFKEHSTLNPKQKLALAKQLNLRARQVEVWFQ 209
Query: 144 NRRTQMKTQMERHENIILRQEHDKLRAENEMLK 176
NRR + K + + L++ D L EN L+
Sbjct: 210 NRRARTKLKQTEVDCEYLKRCCDNLTEENRRLQ 242
>UNIPROTKB|O15266 [details] [associations]
symbol:SHOX "Short stature homeobox protein" species:9606
"Homo sapiens" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006366
"transcription from RNA polymerase II promoter" evidence=TAS]
[GO:0001501 "skeletal system development" evidence=TAS] [GO:0005515
"protein binding" evidence=IPI] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0006366 GO:GO:0001501 HOGENOM:HOG000231518
InterPro:IPR003654 Pfam:PF03826 PROSITE:PS50803 GO:GO:0000976
Orphanet:137693 eggNOG:NOG113578 HOVERGEN:HBG007233 KO:K09331
OrthoDB:EOG41C6X2 EMBL:Y11536 EMBL:Y11535 EMBL:U82668 EMBL:U89331
EMBL:BX004827 IPI:IPI00005744 IPI:IPI00411417 RefSeq:NP_000442.1
RefSeq:NP_006874.1 UniGene:Hs.105932 ProteinModelPortal:O15266
SMR:O15266 IntAct:O15266 STRING:O15266 PhosphoSite:O15266
PRIDE:O15266 DNASU:6473 Ensembl:ENST00000334060
Ensembl:ENST00000381575 Ensembl:ENST00000381578
Ensembl:ENST00000554971 GeneID:6473 KEGG:hsa:6473 UCSC:uc004cph.1
UCSC:uc004cpi.3 CTD:6473 GeneCards:GC0XP000585 HGNC:HGNC:10853
MIM:127300 MIM:249700 MIM:300582 MIM:312865 MIM:400020
neXtProt:NX_O15266 Orphanet:2632 Orphanet:240 PharmGKB:PA134978644
InParanoid:O15266 OMA:SNHCPVH PhylomeDB:O15266 GenomeRNAi:6473
NextBio:25145 Bgee:O15266 CleanEx:HS_SHOX Genevestigator:O15266
Uniprot:O15266
Length = 292
Score = 146 (56.5 bits), Expect = 4.1e-07, P = 4.1e-07
Identities = 37/106 (34%), Positives = 55/106 (51%)
Query: 83 DDQEANEDGPPRKKKYHRHTP---HQIQELESFFKECPHPDEKQRSELSRRLGLESKQIK 139
D + +EDG + K+ T Q+ ELE F E +PD R ELS+RLGL +++
Sbjct: 103 DVKSEDEDGQTKLKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQ 162
Query: 140 FWFQNRRTQMKTQMER-HENIIL-RQEH-DKLRAENEMLKDAMKNP 182
WFQNRR + + Q + H+ +IL H D R + A++ P
Sbjct: 163 VWFQNRRAKCRKQENQMHKGVILGTANHLDACRVAPYVNMGALRMP 208
>WB|WBGene00000439 [details] [associations]
symbol:ceh-16 species:6239 "Caenorhabditis elegans"
[GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA;IDA] [GO:0000976
"transcription regulatory region sequence-specific DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0040015 "negative regulation of multicellular organism growth"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0009792
"embryo development ending in birth or egg hatching" evidence=IMP]
[GO:0009957 "epidermal cell fate specification" evidence=IMP]
[GO:0010172 "embryonic body morphogenesis" evidence=IMP]
[GO:0045026 "plasma membrane fusion" evidence=IGI;IMP] [GO:0048859
"formation of anatomical boundary" evidence=IMP] [GO:0000122
"negative regulation of transcription from RNA polymerase II
promoter" evidence=IMP] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IMP]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0009792
GO:GO:0043565 GO:GO:0045944 GO:GO:0040011 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0000122 GO:GO:0040015 GO:GO:0000976 GO:GO:0010172
GO:GO:0009957 GO:GO:0048859 GeneTree:ENSGT00680000099870
EMBL:AY647457 EMBL:FO080380 PIR:S44752 PIR:T15488
RefSeq:NP_498898.2 UniGene:Cel.25260 ProteinModelPortal:P34326
SMR:P34326 STRING:P34326 EnsemblMetazoa:C13G5.1.1
EnsemblMetazoa:C13G5.1.2 GeneID:191618 KEGG:cel:CELE_C13G5.1
UCSC:C13G5.1 CTD:191618 WormBase:C13G5.1 eggNOG:NOG306728
HOGENOM:HOG000022417 InParanoid:P34326 OMA:PTFASPN NextBio:949698
GO:GO:0045026 PROSITE:PS00033 Uniprot:P34326
Length = 187
Score = 134 (52.2 bits), Expect = 4.2e-07, P = 4.2e-07
Identities = 41/141 (29%), Positives = 64/141 (45%)
Query: 13 RVVAEIFPHCHSMASGAIAQFPLSLSIKNAMDAGEMGLIGEQFDPSVVGRIREEEFES-- 70
R+++ +P C S A P S+S A G + + P+ V R + S
Sbjct: 9 RILSSPYP-CPSPTISTPATSPSSISPTFASPNGTPNIASSMY-PAWVFSTRYSDRPSAG 66
Query: 71 -RSGSDNVEGASGDDQEANEDGPPRKKKYHRHTPHQIQELESFFKECPHPDEKQRSELSR 129
R ++G + E+ PR T Q+ L++ F+E + EK+R EL+
Sbjct: 67 PRHRKSRKRESTGSSGSSEEEKRPRTA----FTGDQLDRLKTEFRESRYLTEKRRQELAH 122
Query: 130 RLGLESKQIKFWFQNRRTQMK 150
LGL QIK WFQN+R ++K
Sbjct: 123 ELGLNESQIKIWFQNKRAKLK 143
>UNIPROTKB|G1K361 [details] [associations]
symbol:PRRX1 "Paired mesoderm homeobox protein 1"
species:9031 "Gallus gallus" [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0002053 "positive
regulation of mesenchymal cell proliferation" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0030326 "embryonic limb
morphogenesis" evidence=IEA] [GO:0042472 "inner ear morphogenesis"
evidence=IEA] [GO:0042474 "middle ear morphogenesis" evidence=IEA]
[GO:0045880 "positive regulation of smoothened signaling pathway"
evidence=IEA] [GO:0048701 "embryonic cranial skeleton
morphogenesis" evidence=IEA] [GO:0048844 "artery morphogenesis"
evidence=IEA] [GO:0051216 "cartilage development" evidence=IEA]
[GO:0060021 "palate development" evidence=IEA] [GO:0071837 "HMG box
domain binding" evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 EMBL:AADN02033985
EMBL:AADN02033987 EMBL:AADN02033986 ProteinModelPortal:G1K361
Ensembl:ENSGALT00000033836 Uniprot:G1K361
Length = 214
Score = 140 (54.3 bits), Expect = 4.6e-07, P = 4.6e-07
Identities = 42/138 (30%), Positives = 70/138 (50%)
Query: 36 SLSIKNAMDAGEMG-LIGEQFDPS--VVGRIREEEFESRSGSDNVEGASGDDQEANEDGP 92
+ S+ + +D E G ++ Q D GR E SGSD + +DQ +E+
Sbjct: 33 NFSVSHLLDLEEAGDMVAAQGDEGGGEPGRSLLESPGLTSGSDTPQ--QDNDQLNSEEKK 90
Query: 93 PRKKKYHRHT--PHQIQELESFFKECPHPDEKQRSELSRRLGLESKQIKFWFQNRRTQMK 150
RK++ +R T Q+Q LE F+ +PD R +L+RR+ L +++ WFQNRR + +
Sbjct: 91 KRKQRRNRTTFNSSQLQALERVFERTHYPDAFVREDLARRVNLTEARVQVWFQNRRAKFR 150
Query: 151 TQMERHENIILRQEHDKL 168
R+E +L ++ L
Sbjct: 151 ----RNERAMLASKNASL 164
>UNIPROTKB|E1C1I8 [details] [associations]
symbol:LOC100858967 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104263 EMBL:AADN02000990 EMBL:AADN02000991
EMBL:AADN02000992 EMBL:AADN02000993 IPI:IPI00818363
Ensembl:ENSGALT00000037817 ArrayExpress:E1C1I8 Uniprot:E1C1I8
Length = 203
Score = 138 (53.6 bits), Expect = 4.7e-07, P = 4.7e-07
Identities = 36/98 (36%), Positives = 56/98 (57%)
Query: 57 PSVVGRIREEEFESR--SGSDNVEGASGDDQE--ANEDGPPRKKKYHRHTPHQIQELESF 112
P + R R R SGS + E +SG+++E + G +KK +T +QI+ELE
Sbjct: 91 PRTIRRTRAARRRPRPESGS-SPESSSGNNEEKSGSSSGQRTRKKRCPYTKYQIRELERE 149
Query: 113 FKECPHPDEKQRSELSRRLGLESKQIKFWFQNRRTQMK 150
F + ++++R +LSR L L +Q+K WFQNRR + K
Sbjct: 150 FFFSVYINKEKRLQLSRMLNLTDRQVKIWFQNRRMKEK 187
>UNIPROTKB|F1RSD4 [details] [associations]
symbol:PRRX1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 GeneTree:ENSGT00700000104279
EMBL:CU138499 Ensembl:ENSSSCT00000006879 Uniprot:F1RSD4
Length = 141
Score = 127 (49.8 bits), Expect = 4.7e-07, P = 4.7e-07
Identities = 30/88 (34%), Positives = 50/88 (56%)
Query: 83 DDQEANEDGPPRKKKYHRHT--PHQIQELESFFKECPHPDEKQRSELSRRLGLESKQIKF 140
DDQ +E+ RK++ +R T Q+Q LE F+ +PD R +L+RR+ L +++
Sbjct: 3 DDQLNSEEKKKRKQRRNRTTFNSSQLQALERVFERTHYPDAFVREDLARRVNLTEARVQV 62
Query: 141 WFQNRRTQMKTQMERHENIILRQEHDKL 168
WFQNRR + + R+E +L ++ L
Sbjct: 63 WFQNRRAKFR----RNERAMLANKNASL 86
>RGD|620371 [details] [associations]
symbol:Rax "retina and anterior neural fold homeobox"
species:10116 "Rattus norvegicus" [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0007389 "pattern specification
process" evidence=ISO] [GO:0007420 "brain development"
evidence=ISO] [GO:0021854 "hypothalamus development" evidence=ISO]
[GO:0043010 "camera-type eye development" evidence=ISO] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0060173 "limb
development" evidence=ISO] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 RGD:620371 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0043010
HOGENOM:HOG000231518 InterPro:IPR003654 Pfam:PF03826
PROSITE:PS50803 GO:GO:0007389 GO:GO:0060173 eggNOG:NOG261733
GO:GO:0021854 HOVERGEN:HBG021349 OrthoDB:EOG4V4387 CTD:30062
KO:K09332 EMBL:AF320225 EMBL:AF320224 EMBL:AF135839 IPI:IPI00204057
IPI:IPI00760132 RefSeq:NP_446130.1 UniGene:Rn.87955
ProteinModelPortal:Q9JLT7 SMR:Q9JLT7 STRING:Q9JLT7 PRIDE:Q9JLT7
GeneID:114213 KEGG:rno:114213 UCSC:RGD:620371 InParanoid:Q9JLT7
NextBio:618425 ArrayExpress:Q9JLT7 Genevestigator:Q9JLT7
GermOnline:ENSRNOG00000016944 Uniprot:Q9JLT7
Length = 342
Score = 147 (56.8 bits), Expect = 4.9e-07, P = 4.9e-07
Identities = 41/136 (30%), Positives = 70/136 (51%)
Query: 65 EEEFESRSGSDNVEG-ASGDDQEANEDGPPRKKKYHRH----TPHQIQELESFFKECPHP 119
+E+ E+R G A+GD + + E+ PP KKK+ R+ T +Q+ ELE F++ +P
Sbjct: 104 KEQGEARPSPGLPVGPAAGDSKLSEEEEPP-KKKHRRNRTTFTTYQLHELERAFEKSHYP 162
Query: 120 DEKQRSELSRRLGLESKQIKFWFQNRRTQMKTQMERHENIILRQEHDKLRAENEMLKDAM 179
D R EL+ ++ L +++ WFQNRR + + Q E+ E ++ + L + + +
Sbjct: 163 DVYSREELAGKVNLPEVRVQVWFQNRRAKWRRQ-EKLEVSSMKLQDSPLLSFSRSPPSSA 221
Query: 180 KNPTCNNCGGPAVPGS 195
P G PGS
Sbjct: 222 LAPLGGPGSGSGPPGS 237
>UNIPROTKB|Q9JLT7 [details] [associations]
symbol:Rax "Retinal homeobox protein Rx" species:10116
"Rattus norvegicus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 RGD:620371 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0043010
HOGENOM:HOG000231518 InterPro:IPR003654 Pfam:PF03826
PROSITE:PS50803 GO:GO:0007389 GO:GO:0060173 eggNOG:NOG261733
GO:GO:0021854 HOVERGEN:HBG021349 OrthoDB:EOG4V4387 CTD:30062
KO:K09332 EMBL:AF320225 EMBL:AF320224 EMBL:AF135839 IPI:IPI00204057
IPI:IPI00760132 RefSeq:NP_446130.1 UniGene:Rn.87955
ProteinModelPortal:Q9JLT7 SMR:Q9JLT7 STRING:Q9JLT7 PRIDE:Q9JLT7
GeneID:114213 KEGG:rno:114213 UCSC:RGD:620371 InParanoid:Q9JLT7
NextBio:618425 ArrayExpress:Q9JLT7 Genevestigator:Q9JLT7
GermOnline:ENSRNOG00000016944 Uniprot:Q9JLT7
Length = 342
Score = 147 (56.8 bits), Expect = 4.9e-07, P = 4.9e-07
Identities = 41/136 (30%), Positives = 70/136 (51%)
Query: 65 EEEFESRSGSDNVEG-ASGDDQEANEDGPPRKKKYHRH----TPHQIQELESFFKECPHP 119
+E+ E+R G A+GD + + E+ PP KKK+ R+ T +Q+ ELE F++ +P
Sbjct: 104 KEQGEARPSPGLPVGPAAGDSKLSEEEEPP-KKKHRRNRTTFTTYQLHELERAFEKSHYP 162
Query: 120 DEKQRSELSRRLGLESKQIKFWFQNRRTQMKTQMERHENIILRQEHDKLRAENEMLKDAM 179
D R EL+ ++ L +++ WFQNRR + + Q E+ E ++ + L + + +
Sbjct: 163 DVYSREELAGKVNLPEVRVQVWFQNRRAKWRRQ-EKLEVSSMKLQDSPLLSFSRSPPSSA 221
Query: 180 KNPTCNNCGGPAVPGS 195
P G PGS
Sbjct: 222 LAPLGGPGSGSGPPGS 237
>RGD|1311471 [details] [associations]
symbol:Prrx2 "paired related homeobox 2" species:10116 "Rattus
norvegicus" [GO:0002053 "positive regulation of mesenchymal cell
proliferation" evidence=IEA;ISO] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0030326 "embryonic limb morphogenesis"
evidence=IEA;ISO] [GO:0042472 "inner ear morphogenesis"
evidence=IEA;ISO] [GO:0042474 "middle ear morphogenesis"
evidence=IEA;ISO] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0045880 "positive regulation of smoothened
signaling pathway" evidence=IEA;ISO] [GO:0048701 "embryonic cranial
skeleton morphogenesis" evidence=IEA;ISO] [GO:0048704 "embryonic
skeletal system morphogenesis" evidence=ISO] [GO:0048844 "artery
morphogenesis" evidence=IEA;ISO] [GO:0051216 "cartilage
development" evidence=IEA;ISO] [GO:0071837 "HMG box domain binding"
evidence=ISO] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 RGD:1311471 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0042472 GO:GO:0030326
GO:GO:0051216 InterPro:IPR003654 Pfam:PF03826 PROSITE:PS50803
GO:GO:0048844 GO:GO:0048701 GeneTree:ENSGT00700000104279
GO:GO:0002053 GO:GO:0045880 GO:GO:0042474 EMBL:CH474001 KO:K09329
OrthoDB:EOG4RR6J8 CTD:51450 IPI:IPI00372003 RefSeq:NP_001099209.1
UniGene:Rn.93004 Ensembl:ENSRNOT00000008270 GeneID:113931
KEGG:rno:113931 UCSC:RGD:1311471 NextBio:618046 Uniprot:D3ZLB3
Length = 248
Score = 143 (55.4 bits), Expect = 5.0e-07, P = 5.0e-07
Identities = 42/134 (31%), Positives = 61/134 (45%)
Query: 26 ASGAIAQFPLSLSIKNAMDAGEMGLIGEQFDPSVVG-RIREEEFESRSGSDNVEGASGDD 84
A G AQ + S+ + +D E+ G + V G RE SG + A+ D
Sbjct: 22 APGDCAQARKNFSVSHLLDLEEVAAAGRRAAGPVPGPEAREGAAREPSGGSSGSEAAPQD 81
Query: 85 QEANEDG----PPRKKKYHRH----TPHQIQELESFFKECPHPDEKQRSELSRRLGLESK 136
E G RKKK R+ Q+Q LE F+ +PD R EL+RR+ L
Sbjct: 82 GECAAPGHGSATKRKKKQRRNRTTFNSSQLQALERVFERTHYPDAFVREELARRVNLSEA 141
Query: 137 QIKFWFQNRRTQMK 150
+++ WFQNRR + +
Sbjct: 142 RVQVWFQNRRAKFR 155
>UNIPROTKB|G3MZU0 [details] [associations]
symbol:GSC2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0006357 "regulation
of transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
GO:GO:0006357 Gene3D:1.10.10.60 SUPFAM:SSF46689
GeneTree:ENSGT00700000104273 EMBL:DAAA02045756 EMBL:DAAA02045757
Ensembl:ENSBTAT00000065062 OMA:KPPRESC Uniprot:G3MZU0
Length = 169
Score = 126 (49.4 bits), Expect = 6.0e-07, P = 6.0e-07
Identities = 25/76 (32%), Positives = 42/76 (55%)
Query: 79 GASGDDQEANEDGPPRKKKYHR--HTPHQIQELESFFKECPHPDEKQRSELSRRLGLESK 136
G G A GPPR+ + HR + Q++ LE+ F + +PD R L+ R+ L +
Sbjct: 73 GGPGAQPGAGVQGPPRRTRRHRTIFSEEQLRALEALFMQNQYPDVGTRERLAGRIRLREE 132
Query: 137 QIKFWFQNRRTQMKTQ 152
+++ WF+NRR + + Q
Sbjct: 133 RVEVWFKNRRAKWRHQ 148
>UNIPROTKB|J9NW39 [details] [associations]
symbol:ARX "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0007275 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR003654
Pfam:PF03826 PROSITE:PS50803 GeneTree:ENSGT00700000104279
EMBL:AAEX03026212 EMBL:AAEX03026213 Ensembl:ENSCAFT00000048909
Uniprot:J9NW39
Length = 520
Score = 149 (57.5 bits), Expect = 6.7e-07, P = 6.7e-07
Identities = 42/131 (32%), Positives = 69/131 (52%)
Query: 22 CHSMASGAIAQFPLSLSIKNAMDAGEMGLIGEQFDPSVVGRIREEEFESRSGSDNVEGAS 81
C A+GA+A + + A+ A E G + P + E+ E + G D+V ++
Sbjct: 219 CAVAATGAVAAAAAAAAAAAAV-ATE----GGELSPKEELLLHPEDAEGKDGEDSVCLSA 273
Query: 82 GDDQEANEDGPPRKKKYHR--HTPHQIQELESFFKECPHPDEKQRSELSRRLGLESKQIK 139
G D E E RK++ +R T +Q++ELE F++ +PD R EL+ RL L +++
Sbjct: 274 GSDSE--EGLLKRKQRRYRTTFTSYQLEELERAFQKTHYPDVFTREELAMRLDLTEARVQ 331
Query: 140 FWFQNRRTQMK 150
WFQNRR + +
Sbjct: 332 VWFQNRRAKWR 342
>UNIPROTKB|E2QVR4 [details] [associations]
symbol:ARX "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR003654 Pfam:PF03826
PROSITE:PS50803 Ensembl:ENSCAFT00000021479 Uniprot:E2QVR4
Length = 564
Score = 149 (57.5 bits), Expect = 7.6e-07, P = 7.6e-07
Identities = 42/131 (32%), Positives = 69/131 (52%)
Query: 22 CHSMASGAIAQFPLSLSIKNAMDAGEMGLIGEQFDPSVVGRIREEEFESRSGSDNVEGAS 81
C A+GA+A + + A+ A E G + P + E+ E + G D+V ++
Sbjct: 263 CAVAATGAVAAAAAAAAAAAAV-ATE----GGELSPKEELLLHPEDAEGKDGEDSVCLSA 317
Query: 82 GDDQEANEDGPPRKKKYHR--HTPHQIQELESFFKECPHPDEKQRSELSRRLGLESKQIK 139
G D E E RK++ +R T +Q++ELE F++ +PD R EL+ RL L +++
Sbjct: 318 GSDSE--EGLLKRKQRRYRTTFTSYQLEELERAFQKTHYPDVFTREELAMRLDLTEARVQ 375
Query: 140 FWFQNRRTQMK 150
WFQNRR + +
Sbjct: 376 VWFQNRRAKWR 386
>RGD|2320224 [details] [associations]
symbol:LOC100364841 "rCG53272-like" species:10116 "Rattus
norvegicus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 RGD:2320224 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 GeneTree:ENSGT00530000063899
IPI:IPI00959398 Ensembl:ENSRNOT00000035489 Uniprot:F1M524
Length = 96
Score = 125 (49.1 bits), Expect = 7.7e-07, P = 7.7e-07
Identities = 23/67 (34%), Positives = 40/67 (59%)
Query: 94 RKKKYHRHTPH-----QIQELESFFKECPHPDEKQRSELSRRLGLESKQIKFWFQNRRTQ 148
R +++ R +P+ Q++E+E+ F+E P+PD R EL+R L + ++K WF NRR +
Sbjct: 7 RHRRHRRSSPYLFTQWQVEEMENLFEETPYPDVLTRGELARTLNVPEVKVKVWFSNRRAK 66
Query: 149 MKTQMER 155
+ R
Sbjct: 67 QRKNERR 73
>UNIPROTKB|F6XTT5 [details] [associations]
symbol:ARX "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0007275 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR003654
Pfam:PF03826 PROSITE:PS50803 GeneTree:ENSGT00700000104279
OMA:VTHPEER Ensembl:ENSCAFT00000021479 EMBL:AAEX03026212
EMBL:AAEX03026213 Uniprot:F6XTT5
Length = 574
Score = 149 (57.5 bits), Expect = 7.8e-07, P = 7.8e-07
Identities = 42/131 (32%), Positives = 69/131 (52%)
Query: 22 CHSMASGAIAQFPLSLSIKNAMDAGEMGLIGEQFDPSVVGRIREEEFESRSGSDNVEGAS 81
C A+GA+A + + A+ A E G + P + E+ E + G D+V ++
Sbjct: 273 CAVAATGAVAAAAAAAAAAAAV-ATE----GGELSPKEELLLHPEDAEGKDGEDSVCLSA 327
Query: 82 GDDQEANEDGPPRKKKYHR--HTPHQIQELESFFKECPHPDEKQRSELSRRLGLESKQIK 139
G D E E RK++ +R T +Q++ELE F++ +PD R EL+ RL L +++
Sbjct: 328 GSDSE--EGLLKRKQRRYRTTFTSYQLEELERAFQKTHYPDVFTREELAMRLDLTEARVQ 385
Query: 140 FWFQNRRTQMK 150
WFQNRR + +
Sbjct: 386 VWFQNRRAKWR 396
>UNIPROTKB|F1NFE6 [details] [associations]
symbol:SHOX "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0001649 "osteoblast
differentiation" evidence=IEA] [GO:0002053 "positive regulation of
mesenchymal cell proliferation" evidence=IEA] [GO:0002063
"chondrocyte development" evidence=IEA] [GO:0003170 "heart valve
development" evidence=IEA] [GO:0003209 "cardiac atrium
morphogenesis" evidence=IEA] [GO:0030326 "embryonic limb
morphogenesis" evidence=IEA] [GO:0032330 "regulation of chondrocyte
differentiation" evidence=IEA] [GO:0045880 "positive regulation of
smoothened signaling pathway" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0048557 "embryonic digestive tract morphogenesis"
evidence=IEA] [GO:0048743 "positive regulation of skeletal muscle
fiber development" evidence=IEA] [GO:0050772 "positive regulation
of axonogenesis" evidence=IEA] [GO:0060272 "embryonic skeletal
joint morphogenesis" evidence=IEA] [GO:0060351 "cartilage
development involved in endochondral bone morphogenesis"
evidence=IEA] [GO:0060415 "muscle tissue morphogenesis"
evidence=IEA] [GO:2000172 "regulation of branching morphogenesis of
a nerve" evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
Pfam:PF00046 PROSITE:PS50071 SMART:SM00389 GO:GO:0007275
GO:GO:0005634 GO:GO:0043565 GO:GO:0045944 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0000122 GO:GO:0032330
InterPro:IPR003654 Pfam:PF03826 PROSITE:PS50803
GeneTree:ENSGT00700000104279 GO:GO:0002053 GO:GO:0048743
GO:GO:0045880 GO:GO:2000172 EMBL:AADN02017635 EMBL:AADN02017636
EMBL:AADN02017637 EMBL:AADN02017638 IPI:IPI00577004
Ensembl:ENSGALT00000026949 OMA:ARVQXVQ Uniprot:F1NFE6
Length = 221
Score = 139 (54.0 bits), Expect = 7.9e-07, P = 7.9e-07
Identities = 39/126 (30%), Positives = 64/126 (50%)
Query: 61 GRIREEEFESRSGSDNVEGASGDDQEANEDGPPRKKKYHRHTPHQIQELESFFKECPHPD 120
GR E +E + ++V+ +D++ R+ + + T Q+ ELE F E +PD
Sbjct: 22 GRTAEGIYECKEKREDVKS---EDEDGQTKLKQRRSRTN-FTLEQLNELERLFDETHYPD 77
Query: 121 EKQRSELSRRLGLESKQIK-FWFQNRRTQMKTQMER-HENIIL-RQEH-DKLRAENEMLK 176
R ELS+RLGL +++ WFQNRR + + Q + H+ +IL H D R +
Sbjct: 78 AFMREELSQRLGLSEARVQQVWFQNRRAKCRKQENQMHKGVILGTASHLDACRVAPYVNM 137
Query: 177 DAMKNP 182
A++ P
Sbjct: 138 GALRMP 143
>MGI|MGI:109632 [details] [associations]
symbol:Rax "retina and anterior neural fold homeobox"
species:10090 "Mus musculus" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0007389 "pattern specification
process" evidence=IMP] [GO:0007420 "brain development"
evidence=IMP] [GO:0021854 "hypothalamus development" evidence=IMP]
[GO:0043010 "camera-type eye development" evidence=IMP] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0060173 "limb
development" evidence=IMP] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 MGI:MGI:109632 GO:GO:0005634 EMBL:CH466528
GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0043010 HOGENOM:HOG000231518
InterPro:IPR003654 Pfam:PF03826 PROSITE:PS50803 GO:GO:0007389
GO:GO:0060173 eggNOG:NOG261733 GO:GO:0021854
GeneTree:ENSGT00700000104256 CleanEx:MM_RAX HOVERGEN:HBG021349
OrthoDB:EOG4V4387 CTD:30062 KO:K09332 OMA:CGPGFGD ChiTaRS:RAX
EMBL:AF001906 EMBL:U73177 EMBL:BC024731 EMBL:BC058757
IPI:IPI00132598 RefSeq:NP_038861.2 UniGene:Mm.489746
ProteinModelPortal:O35602 SMR:O35602 STRING:O35602
PhosphoSite:O35602 PRIDE:O35602 Ensembl:ENSMUST00000025396
GeneID:19434 KEGG:mmu:19434 InParanoid:Q6GT92 NextBio:296571
Bgee:O35602 Genevestigator:O35602 GermOnline:ENSMUSG00000024518
Uniprot:O35602
Length = 342
Score = 145 (56.1 bits), Expect = 8.1e-07, P = 8.1e-07
Identities = 40/136 (29%), Positives = 69/136 (50%)
Query: 65 EEEFESRSGSDNVEGASGDDQEANEDGPPRKKKYHRH----TPHQIQELESFFKECPHPD 120
+E+ E+R G + D + +E+ PP KKK+ R+ T +Q+ ELE F++ +PD
Sbjct: 104 KEQGEARPSPGLSVGPAAGDSKLSEEEPP-KKKHRRNRTTFTTYQLHELERAFEKSHYPD 162
Query: 121 EKQRSELSRRLGLESKQIKFWFQNRRTQMKTQMERHENIILRQEHDKLRAENEMLKDAMK 180
R EL+ ++ L +++ WFQNRR + + Q E+ E ++ + L + + +
Sbjct: 163 VYSREELAGKVNLPEVRVQVWFQNRRAKWRRQ-EKLEVSSMKLQDSPLLSFSRSPPSSAL 221
Query: 181 NPTCNNCG-GPAVPGS 195
P G G PGS
Sbjct: 222 APLGTGPGSGSGPPGS 237
>FB|FBgn0000061 [details] [associations]
symbol:al "aristaless" species:7227 "Drosophila melanogaster"
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS;NAS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS;NAS] [GO:0007449 "proximal/distal pattern formation,
imaginal disc" evidence=NAS] [GO:0048800 "antennal morphogenesis"
evidence=IMP] [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0035015
"elongation of arista core" evidence=IMP] [GO:0045747 "positive
regulation of Notch signaling pathway" evidence=IEP] [GO:0035218
"leg disc development" evidence=IMP] [GO:0022416 "chaeta
development" evidence=IMP] [GO:0043234 "protein complex"
evidence=IPI] [GO:0043565 "sequence-specific DNA binding"
evidence=IDA;IPI] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IMP] [GO:0007480 "imaginal
disc-derived leg morphogenesis" evidence=IMP] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0045892 GO:GO:0043234
EMBL:AE014134 GO:GO:0003700 GO:GO:0045747 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0022416 InterPro:IPR003654 Pfam:PF03826
PROSITE:PS50803 GeneTree:ENSGT00700000104013 EMBL:L08401
EMBL:AY121696 PIR:A40685 RefSeq:NP_722629.1 UniGene:Dm.6423
PDB:3A01 PDB:3A02 PDB:3LNQ PDBsum:3A01 PDBsum:3A02 PDBsum:3LNQ
ProteinModelPortal:Q06453 SMR:Q06453 DIP:DIP-23247N IntAct:Q06453
MINT:MINT-827785 STRING:Q06453 EnsemblMetazoa:FBtr0078053
GeneID:33208 KEGG:dme:Dmel_CG3935 UCSC:CG3935-RA CTD:33208
FlyBase:FBgn0000061 eggNOG:NOG313402 InParanoid:Q06453 KO:K09452
OMA:FTHLGFQ OrthoDB:EOG41ZCSM PhylomeDB:Q06453
EvolutionaryTrace:Q06453 GenomeRNAi:33208 NextBio:782439
Bgee:Q06453 GermOnline:CG3935 GO:GO:0000976 GO:GO:0035015
GO:GO:0007480 Uniprot:Q06453
Length = 408
Score = 146 (56.5 bits), Expect = 9.2e-07, P = 9.2e-07
Identities = 33/84 (39%), Positives = 49/84 (58%)
Query: 72 SGSDNVEGASGD-DQEANEDGPPRKKKYHR--HTPHQIQELESFFKECPHPDEKQRSELS 128
SG N + G+ D EA+E P RK++ +R T Q++ELE F +PD R EL+
Sbjct: 60 SGGTNSPVSDGNSDCEADEYAPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTREELA 119
Query: 129 RRLGLESKQIKFWFQNRRTQMKTQ 152
++GL +I+ WFQNRR + + Q
Sbjct: 120 MKIGLTEARIQVWFQNRRAKWRKQ 143
>TAIR|locus:2103396 [details] [associations]
symbol:HAT3 "homeobox-leucine zipper protein 3"
species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM;IEA;ISS] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] InterPro:IPR001356
InterPro:IPR003106 InterPro:IPR006712 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 Pfam:PF02183 Pfam:PF04618
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00340 SMART:SM00389
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689
EMBL:AL138646 KO:K09338 HOGENOM:HOG000241612
ProtClustDB:CLSN2683322 EMBL:U09338 EMBL:U09339 EMBL:AJ440781
EMBL:AY099565 EMBL:BT008713 IPI:IPI00525230 PIR:T47850 PIR:T52350
RefSeq:NP_191598.1 UniGene:At.21112 ProteinModelPortal:P46602
SMR:P46602 IntAct:P46602 EnsemblPlants:AT3G60390.1 GeneID:825210
KEGG:ath:AT3G60390 GeneFarm:3969 TAIR:At3g60390 eggNOG:NOG246006
InParanoid:P46602 OMA:IQNTWIN PhylomeDB:P46602
Genevestigator:P46602 GermOnline:AT3G60390 Uniprot:P46602
Length = 315
Score = 145 (56.1 bits), Expect = 9.6e-07, Sum P(2) = 9.6e-07
Identities = 36/116 (31%), Positives = 60/116 (51%)
Query: 61 GRIREEEFESRSGSDNVEGASGDDQEANEDGPPRKKKYHRHTPHQIQELESFFKECPHPD 120
GR+ + E E S S G DD++ + +G +K R + Q LE FKE +
Sbjct: 129 GRVEDNEIERASCS---LGGGSDDEDGSGNGDDSSRKKLRLSKEQALVLEETFKEHSTLN 185
Query: 121 EKQRSELSRRLGLESKQIKFWFQNRRTQMKTQMERHENIILRQEHDKLRAENEMLK 176
KQ+ L+++L L ++Q++ WFQNRR + K + + L++ + L EN L+
Sbjct: 186 PKQKMALAKQLNLRTRQVEVWFQNRRARTKLKQTEVDCEYLKRCCENLTDENRRLQ 241
Score = 41 (19.5 bits), Expect = 9.6e-07, Sum P(2) = 9.6e-07
Identities = 8/20 (40%), Positives = 14/20 (70%)
Query: 230 LTSSAGPISPQGVNSSLELG 249
+TSS+ ++P +NSS +G
Sbjct: 277 VTSSSSSVAPPVMNSSSPMG 296
>UNIPROTKB|F1P4U7 [details] [associations]
symbol:HOXD11 "Homeobox protein Hox-D11" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0001656 "metanephros development" evidence=IEA]
[GO:0001658 "branching involved in ureteric bud morphogenesis"
evidence=IEA] [GO:0001759 "organ induction" evidence=IEA]
[GO:0009952 "anterior/posterior pattern specification"
evidence=IEA] [GO:0009953 "dorsal/ventral pattern formation"
evidence=IEA] [GO:0009954 "proximal/distal pattern formation"
evidence=IEA] [GO:0010720 "positive regulation of cell development"
evidence=IEA] [GO:0032332 "positive regulation of chondrocyte
differentiation" evidence=IEA] [GO:0042733 "embryonic digit
morphogenesis" evidence=IEA] [GO:0048589 "developmental growth"
evidence=IEA] [GO:0060272 "embryonic skeletal joint morphogenesis"
evidence=IEA] [GO:0060351 "cartilage development involved in
endochondral bone morphogenesis" evidence=IEA] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0032332 GO:GO:0048589 GO:GO:0001759
GO:GO:0010720 GeneTree:ENSGT00700000104263 IPI:IPI00583692
EMBL:AADN02020032 Ensembl:ENSGALT00000015085 Uniprot:F1P4U7
Length = 109
Score = 124 (48.7 bits), Expect = 9.9e-07, P = 9.9e-07
Identities = 30/88 (34%), Positives = 53/88 (60%)
Query: 64 REEEFESRSGSDNVEGASGDDQEANEDGPPR-KKKYHRHTPHQIQELESFFKECPHPDEK 122
+E++ + SG+ + G + ++ + P R +KK +T +QI+ELE F + +++
Sbjct: 6 QEKKVTTASGAASPPGEAVAEKSNSSAVPQRSRKKRCPYTKYQIRELEREFFFNVYINKE 65
Query: 123 QRSELSRRLGLESKQIKFWFQNRRTQMK 150
+R +LSR L L +Q+K WFQNRR + K
Sbjct: 66 KRLQLSRMLNLTDRQVKIWFQNRRMKEK 93
>UNIPROTKB|G3V2N9 [details] [associations]
symbol:NOBOX "Homeobox protein NOBOX" species:9606 "Homo
sapiens" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0000976 EMBL:AC004534 HGNC:HGNC:22448
ProteinModelPortal:G3V2N9 SMR:G3V2N9 Ensembl:ENST00000555556
ArrayExpress:G3V2N9 Bgee:G3V2N9 Uniprot:G3V2N9
Length = 166
Score = 124 (48.7 bits), Expect = 9.9e-07, P = 9.9e-07
Identities = 27/82 (32%), Positives = 47/82 (57%)
Query: 80 ASGDDQEANEDGPP------RKKKYHRHTPHQIQELESFFKECPHPDEKQRSELSRRLGL 133
A + ++ GPP RKK + Q++ELE F+E +PD +R E+++ +G+
Sbjct: 41 AQSNQNRDHKQGPPEVTCQIRKKTRTLYRSDQLEELEKIFQEDHYPDSDKRREIAQTVGV 100
Query: 134 ESKQIKFWFQNRRTQMKTQMER 155
++I WFQNRR + + +ME+
Sbjct: 101 TPQRIMVWFQNRRAKWR-KMEK 121
>UNIPROTKB|G1K2Z3 [details] [associations]
symbol:PRRX1 "Paired mesoderm homeobox protein 1"
species:9031 "Gallus gallus" [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0002053 "positive
regulation of mesenchymal cell proliferation" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0030326 "embryonic limb
morphogenesis" evidence=IEA] [GO:0042472 "inner ear morphogenesis"
evidence=IEA] [GO:0042474 "middle ear morphogenesis" evidence=IEA]
[GO:0045880 "positive regulation of smoothened signaling pathway"
evidence=IEA] [GO:0048701 "embryonic cranial skeleton
morphogenesis" evidence=IEA] [GO:0048844 "artery morphogenesis"
evidence=IEA] [GO:0051216 "cartilage development" evidence=IEA]
[GO:0060021 "palate development" evidence=IEA] [GO:0071837 "HMG box
domain binding" evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0007275 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR003654
Pfam:PF03826 PROSITE:PS50803 GeneTree:ENSGT00700000104279
OMA:WGSAAPY EMBL:AADN02033985 EMBL:AADN02033987 EMBL:AADN02033986
Ensembl:ENSGALT00000005264 Uniprot:G1K2Z3
Length = 245
Score = 140 (54.3 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 42/138 (30%), Positives = 70/138 (50%)
Query: 36 SLSIKNAMDAGEMG-LIGEQFDPS--VVGRIREEEFESRSGSDNVEGASGDDQEANEDGP 92
+ S+ + +D E G ++ Q D GR E SGSD + +DQ +E+
Sbjct: 33 NFSVSHLLDLEEAGDMVAAQGDEGGGEPGRSLLESPGLTSGSDTPQ--QDNDQLNSEEKK 90
Query: 93 PRKKKYHRHT--PHQIQELESFFKECPHPDEKQRSELSRRLGLESKQIKFWFQNRRTQMK 150
RK++ +R T Q+Q LE F+ +PD R +L+RR+ L +++ WFQNRR + +
Sbjct: 91 KRKQRRNRTTFNSSQLQALERVFERTHYPDAFVREDLARRVNLTEARVQVWFQNRRAKFR 150
Query: 151 TQMERHENIILRQEHDKL 168
R+E +L ++ L
Sbjct: 151 ----RNERAMLASKNASL 164
>UNIPROTKB|Q05437 [details] [associations]
symbol:PRRX1 "Paired mesoderm homeobox protein 1"
species:9031 "Gallus gallus" [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0007275 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 HOGENOM:HOG000231518
InterPro:IPR003654 Pfam:PF03826 PROSITE:PS50803 eggNOG:NOG267226
EMBL:D13433 EMBL:S69088 IPI:IPI00592701 PIR:I51226
RefSeq:NP_001007822.1 UniGene:Gga.1546 ProteinModelPortal:Q05437
SMR:Q05437 IntAct:Q05437 STRING:Q05437 GeneID:373941
KEGG:gga:373941 CTD:5396 HOVERGEN:HBG021349 InParanoid:Q05437
KO:K09329 OrthoDB:EOG4RR6J8 NextBio:20813473 Uniprot:Q05437
Length = 245
Score = 140 (54.3 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 42/138 (30%), Positives = 70/138 (50%)
Query: 36 SLSIKNAMDAGEMG-LIGEQFDPS--VVGRIREEEFESRSGSDNVEGASGDDQEANEDGP 92
+ S+ + +D E G ++ Q D GR E SGSD + +DQ +E+
Sbjct: 33 NFSVSHLLDLEEAGDMVAAQGDEGGGEPGRSLLESPGLTSGSDTPQ--QDNDQLNSEEKK 90
Query: 93 PRKKKYHRHT--PHQIQELESFFKECPHPDEKQRSELSRRLGLESKQIKFWFQNRRTQMK 150
RK++ +R T Q+Q LE F+ +PD R +L+RR+ L +++ WFQNRR + +
Sbjct: 91 KRKQRRNRTTFNSSQLQALERVFERTHYPDAFVREDLARRVNLTEARVQVWFQNRRAKFR 150
Query: 151 TQMERHENIILRQEHDKL 168
R+E +L ++ L
Sbjct: 151 ----RNERAMLASKNASL 164
>UNIPROTKB|I3LRI8 [details] [associations]
symbol:I3LRI8 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0046622 "positive
regulation of organ growth" evidence=IEA] [GO:0042127 "regulation
of cell proliferation" evidence=IEA] [GO:0021853 "cerebral cortex
GABAergic interneuron migration" evidence=IEA] [GO:0021846 "cell
proliferation in forebrain" evidence=IEA] [GO:0021831 "embryonic
olfactory bulb interneuron precursor migration" evidence=IEA]
[GO:0021800 "cerebral cortex tangential migration" evidence=IEA]
[GO:0021759 "globus pallidus development" evidence=IEA] [GO:0007411
"axon guidance" evidence=IEA] [GO:0001764 "neuron migration"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0007411
GO:GO:0001764 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0042127 GO:GO:0046622 InterPro:IPR003654
Pfam:PF03826 PROSITE:PS50803 GeneTree:ENSGT00700000104279
OMA:VTHPEER GO:GO:0021846 GO:GO:0021853 GO:GO:0021800 GO:GO:0021831
GO:GO:0021759 EMBL:FP339588 Ensembl:ENSSSCT00000032103
Uniprot:I3LRI8
Length = 451
Score = 146 (56.5 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 36/111 (32%), Positives = 59/111 (53%)
Query: 42 AMDAGEMGLIGEQFDPSVVGRIREEEFESRSGSDNVEGASGDDQEANEDGPPRKKKYHR- 100
A A + G + P + E+ E + G D+V ++G D E E RK++ +R
Sbjct: 165 AASAAAVATEGGELSPKEELLLHPEDAEGKDGEDSVCLSAGSDSE--EGLLKRKQRRYRT 222
Query: 101 -HTPHQIQELESFFKECPHPDEKQRSELSRRLGLESKQIKFWFQNRRTQMK 150
T +Q++ELE F++ +PD R EL+ RL L +++ WFQNRR + +
Sbjct: 223 TFTSYQLEELERAFQKTHYPDVFTREELAMRLDLTEARVQVWFQNRRAKWR 273
>UNIPROTKB|I3L828 [details] [associations]
symbol:SHOX2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:2000172 "regulation
of branching morphogenesis of a nerve" evidence=IEA] [GO:0060415
"muscle tissue morphogenesis" evidence=IEA] [GO:0060351 "cartilage
development involved in endochondral bone morphogenesis"
evidence=IEA] [GO:0060272 "embryonic skeletal joint morphogenesis"
evidence=IEA] [GO:0050772 "positive regulation of axonogenesis"
evidence=IEA] [GO:0048743 "positive regulation of skeletal muscle
fiber development" evidence=IEA] [GO:0048557 "embryonic digestive
tract morphogenesis" evidence=IEA] [GO:0045944 "positive regulation
of transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0045880 "positive regulation of smoothened signaling pathway"
evidence=IEA] [GO:0032330 "regulation of chondrocyte
differentiation" evidence=IEA] [GO:0030326 "embryonic limb
morphogenesis" evidence=IEA] [GO:0003209 "cardiac atrium
morphogenesis" evidence=IEA] [GO:0003170 "heart valve development"
evidence=IEA] [GO:0002063 "chondrocyte development" evidence=IEA]
[GO:0002053 "positive regulation of mesenchymal cell proliferation"
evidence=IEA] [GO:0001649 "osteoblast differentiation"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0045944 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0000122 GO:GO:0030326
GO:GO:0050772 GO:GO:0032330 GO:GO:0001649 InterPro:IPR003654
Pfam:PF03826 PROSITE:PS50803 GO:GO:0000976
GeneTree:ENSGT00700000104279 GO:GO:0060272 GO:GO:0002053
GO:GO:0048743 GO:GO:0060351 GO:GO:0002063 GO:GO:0045880
GO:GO:0003209 GO:GO:0048557 GO:GO:0060415 GO:GO:2000172 CTD:6474
KO:K09331 OMA:CTEAGRD GO:GO:0003170 EMBL:FP312663
RefSeq:NP_001230281.1 UniGene:Ssc.38718 Ensembl:ENSSSCT00000025053
GeneID:100628206 KEGG:ssc:100628206 Uniprot:I3L828
Length = 321
Score = 143 (55.4 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 31/88 (35%), Positives = 48/88 (54%)
Query: 75 DNVEGASGDDQEANEDGPPRKKKYHRHTPHQIQELESFFKECPHPDEKQRSELSRRLGLE 134
D E A G + E R+ + + T Q+ ELE F E +PD R ELS+RLGL
Sbjct: 124 DRKEDAKGMEDEGQTKIKQRRSRTN-FTLEQLNELERLFDETHYPDAFMREELSQRLGLS 182
Query: 135 SKQIKFWFQNRRTQMKTQMER-HENIIL 161
+++ WFQNRR + + Q + H+ +++
Sbjct: 183 EARVQVWFQNRRAKCRKQENQLHKGVLI 210
>TAIR|locus:2041283 [details] [associations]
symbol:HB6 "homeobox protein 6" species:3702 "Arabidopsis
thaliana" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA;ISS;TAS]
[GO:0005634 "nucleus" evidence=ISM;IEA;ISS;IDA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA;ISS]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA;IDA]
[GO:0009414 "response to water deprivation" evidence=IEP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0009738 "abscisic
acid mediated signaling pathway" evidence=TAS] [GO:0009788
"negative regulation of abscisic acid mediated signaling pathway"
evidence=IMP] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0009269 "response to desiccation"
evidence=RCA] [GO:0009409 "response to cold" evidence=RCA]
[GO:0009651 "response to salt stress" evidence=RCA] [GO:0009737
"response to abscisic acid stimulus" evidence=RCA] [GO:0042744
"hydrogen peroxide catabolic process" evidence=RCA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR003106
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 Pfam:PF02183
PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0045893 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0009738 GO:GO:0009414 GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009788
EMBL:AC006592 GO:GO:0000976 KO:K09338 HOGENOM:HOG000006025
ProtClustDB:CLSN2685900 EMBL:X67034 EMBL:AY060569 EMBL:AY063819
EMBL:AY094457 EMBL:AY122903 EMBL:AF104900 IPI:IPI00548532
PIR:E84612 PIR:S47136 RefSeq:NP_565536.1 UniGene:At.25257
ProteinModelPortal:P46668 SMR:P46668 STRING:P46668
EnsemblPlants:AT2G22430.1 GeneID:816775 KEGG:ath:AT2G22430
GeneFarm:3962 TAIR:At2g22430 eggNOG:NOG255500 InParanoid:P46668
OMA:ESDISVK PhylomeDB:P46668 Genevestigator:P46668
GermOnline:AT2G22430 Uniprot:P46668
Length = 311
Score = 135 (52.6 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 46/133 (34%), Positives = 71/133 (53%)
Query: 67 EFESR-SGSDNVEGASGDDQEANEDGPPRKKKYHRHTPHQIQELESFFKECPHPDEKQRS 125
EF+S G + E A + E G KK+ R + +Q++ LE F E + E +R
Sbjct: 35 EFQSMLEGYEEEEEAIVE--ERGHVGLSEKKR--RLSINQVKALEKNF-ELENKLEPERK 89
Query: 126 -ELSRRLGLESKQIKFWFQNRRTQMKT-QMERHENII------LRQEHDKLRAENE-MLK 176
+L++ LGL+ +Q+ WFQNRR + KT Q+E+ ++ LR D LR +NE +L+
Sbjct: 90 VKLAQELGLQPRQVAVWFQNRRARWKTKQLEKDYGVLKTQYDSLRHNFDSLRRDNESLLQ 149
Query: 177 DAMKNPTCNNCGG 189
+ K T N GG
Sbjct: 150 EISKLKTKLNGGG 162
Score = 51 (23.0 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 14/34 (41%), Positives = 21/34 (61%)
Query: 653 AGAMNVNDSGMLILQETWNDSSGSLVVYAPVDVP 686
AG+ + +DS L+ +E SS ++ V APV VP
Sbjct: 235 AGSSDSSDSSALLNEE----SSSNVTVAAPVTVP 264
>UNIPROTKB|Q99811 [details] [associations]
symbol:PRRX2 "Paired mesoderm homeobox protein 2"
species:9606 "Homo sapiens" [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0002053 "positive regulation of
mesenchymal cell proliferation" evidence=IEA] [GO:0030326
"embryonic limb morphogenesis" evidence=IEA] [GO:0042472 "inner ear
morphogenesis" evidence=IEA] [GO:0042474 "middle ear morphogenesis"
evidence=IEA] [GO:0045880 "positive regulation of smoothened
signaling pathway" evidence=IEA] [GO:0048701 "embryonic cranial
skeleton morphogenesis" evidence=IEA] [GO:0048844 "artery
morphogenesis" evidence=IEA] [GO:0051216 "cartilage development"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=NAS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=NAS]
[GO:0000228 "nuclear chromosome" evidence=NAS] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0043565 EMBL:CH471090
GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0042472
GO:GO:0030326 GO:GO:0051216 HOGENOM:HOG000231518 InterPro:IPR003654
Pfam:PF03826 PROSITE:PS50803 GO:GO:0048844 GO:GO:0048701
EMBL:AL590369 GO:GO:0000228 GO:GO:0002053 GO:GO:0045880
GO:GO:0042474 HOVERGEN:HBG021349 KO:K09329 OrthoDB:EOG4RR6J8
eggNOG:NOG309174 EMBL:AF061970 EMBL:BC014645 EMBL:U81600
IPI:IPI00018429 RefSeq:NP_057391.1 UniGene:Hs.660115
ProteinModelPortal:Q99811 SMR:Q99811 STRING:Q99811
PhosphoSite:Q99811 DMDM:12644475 PRIDE:Q99811
Ensembl:ENST00000372469 GeneID:51450 KEGG:hsa:51450 UCSC:uc004byh.3
CTD:51450 GeneCards:GC09P132427 HGNC:HGNC:21338 HPA:HPA026808
MIM:604675 neXtProt:NX_Q99811 PharmGKB:PA134871679
InParanoid:Q99811 OMA:GVSMANS PhylomeDB:Q99811 ChiTaRS:PRRX2
GenomeRNAi:51450 NextBio:55055 Bgee:Q99811 CleanEx:HS_PRRX2
Genevestigator:Q99811 GermOnline:ENSG00000167157 Uniprot:Q99811
Length = 253
Score = 140 (54.3 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 40/136 (29%), Positives = 60/136 (44%)
Query: 24 SMASGAIAQFPLSLSIKNAMDAGEMGLIGE-QFDPSVVGRIREEEFESRSGSDNVEGASG 82
++ G AQ + S+ + +D E+ G P RE SG + A+
Sbjct: 25 ALGPGDCAQARKNFSVSHLLDLEEVAAAGRLAARPGARAEAREGAAREPSGGSSGSEAAP 84
Query: 83 DDQEANEDG----PPRKKKYHRH----TPHQIQELESFFKECPHPDEKQRSELSRRLGLE 134
D E G RKKK R+ Q+Q LE F+ +PD R EL+RR+ L
Sbjct: 85 QDGECPSPGRGSAAKRKKKQRRNRTTFNSSQLQALERVFERTHYPDAFVREELARRVNLS 144
Query: 135 SKQIKFWFQNRRTQMK 150
+++ WFQNRR + +
Sbjct: 145 EARVQVWFQNRRAKFR 160
>UNIPROTKB|Q9GMA3 [details] [associations]
symbol:VSX1 "Visual system homeobox 1" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0060040 "retinal
bipolar neuron differentiation" evidence=IEA] [GO:0042551 "neuron
maturation" evidence=IEA] [GO:0007601 "visual perception"
evidence=IEA] [GO:0050896 "response to stimulus" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0007601 GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 GO:GO:0050896 Gene3D:1.10.10.60
SUPFAM:SSF46689 GeneTree:ENSGT00700000104013 GO:GO:0060040
GO:GO:0042551 eggNOG:NOG237888 HOGENOM:HOG000115909
InterPro:IPR023339 PROSITE:PS51496 EMBL:AF251032 IPI:IPI00716722
RefSeq:NP_777192.1 UniGene:Bt.5555 ProteinModelPortal:Q9GMA3
SMR:Q9GMA3 PRIDE:Q9GMA3 Ensembl:ENSBTAT00000004329 GeneID:286802
KEGG:bta:286802 CTD:30813 HOVERGEN:HBG036251 InParanoid:Q9GMA3
KO:K09335 OMA:WGSDHLK OrthoDB:EOG4907B0 NextBio:20806456
Uniprot:Q9GMA3
Length = 365
Score = 144 (55.7 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 36/96 (37%), Positives = 54/96 (56%)
Query: 64 REEEFESRSGSDNVEGASGD--DQEANEDGPPRKKKYHR--HTPHQIQELESFFKECPHP 119
R++ ES S SD + S D D++A+ RKK+ HR T HQ++ELE F E +P
Sbjct: 131 RQKRSESVSTSDE-DSPSEDRSDRKASPAPSKRKKRRHRTVFTAHQLEELEKAFSEAHYP 189
Query: 120 DEKQRSELSRRLGLESKQIKFWFQNRRTQMKTQMER 155
D R L+ + L +I+ WFQNRR + + + +R
Sbjct: 190 DVYAREMLAMKTELPEDRIQVWFQNRRAKWRKREKR 225
>UNIPROTKB|E1BLB9 [details] [associations]
symbol:E1BLB9 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:2000172 "regulation
of branching morphogenesis of a nerve" evidence=IEA] [GO:0060415
"muscle tissue morphogenesis" evidence=IEA] [GO:0060351 "cartilage
development involved in endochondral bone morphogenesis"
evidence=IEA] [GO:0060272 "embryonic skeletal joint morphogenesis"
evidence=IEA] [GO:0050772 "positive regulation of axonogenesis"
evidence=IEA] [GO:0048743 "positive regulation of skeletal muscle
fiber development" evidence=IEA] [GO:0048557 "embryonic digestive
tract morphogenesis" evidence=IEA] [GO:0045944 "positive regulation
of transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0045880 "positive regulation of smoothened signaling pathway"
evidence=IEA] [GO:0032330 "regulation of chondrocyte
differentiation" evidence=IEA] [GO:0030326 "embryonic limb
morphogenesis" evidence=IEA] [GO:0003209 "cardiac atrium
morphogenesis" evidence=IEA] [GO:0003170 "heart valve development"
evidence=IEA] [GO:0002063 "chondrocyte development" evidence=IEA]
[GO:0002053 "positive regulation of mesenchymal cell proliferation"
evidence=IEA] [GO:0001649 "osteoblast differentiation"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0045944 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0000122 GO:GO:0030326
GO:GO:0050772 GO:GO:0032330 GO:GO:0001649 InterPro:IPR003654
Pfam:PF03826 PROSITE:PS50803 GO:GO:0000976
GeneTree:ENSGT00700000104279 GO:GO:0060272 GO:GO:0002053
GO:GO:0048743 GO:GO:0060351 GO:GO:0002063 GO:GO:0045880
GO:GO:0003209 GO:GO:0048557 GO:GO:0060415 GO:GO:2000172 OMA:CTEAGRD
GO:GO:0003170 EMBL:DAAA02002472 IPI:IPI00838807 UniGene:Bt.59425
Ensembl:ENSBTAT00000044731 NextBio:20874258 Uniprot:E1BLB9
Length = 331
Score = 143 (55.4 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 31/88 (35%), Positives = 48/88 (54%)
Query: 75 DNVEGASGDDQEANEDGPPRKKKYHRHTPHQIQELESFFKECPHPDEKQRSELSRRLGLE 134
D E A G + E R+ + + T Q+ ELE F E +PD R ELS+RLGL
Sbjct: 122 DRKEDAKGMEDEGQTKIKQRRSRTN-FTLEQLNELERLFDETHYPDAFMREELSQRLGLS 180
Query: 135 SKQIKFWFQNRRTQMKTQMER-HENIIL 161
+++ WFQNRR + + Q + H+ +++
Sbjct: 181 EARVQVWFQNRRAKCRKQENQLHKGVLI 208
>UNIPROTKB|O60902 [details] [associations]
symbol:SHOX2 "Short stature homeobox protein 2"
species:9606 "Homo sapiens" [GO:0000976 "transcription regulatory
region sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0001649
"osteoblast differentiation" evidence=IEA] [GO:0002053 "positive
regulation of mesenchymal cell proliferation" evidence=IEA]
[GO:0002063 "chondrocyte development" evidence=IEA] [GO:0003170
"heart valve development" evidence=IEA] [GO:0003209 "cardiac atrium
morphogenesis" evidence=IEA] [GO:0030326 "embryonic limb
morphogenesis" evidence=IEA] [GO:0032330 "regulation of chondrocyte
differentiation" evidence=IEA] [GO:0045880 "positive regulation of
smoothened signaling pathway" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0048557 "embryonic digestive tract morphogenesis"
evidence=IEA] [GO:0048743 "positive regulation of skeletal muscle
fiber development" evidence=IEA] [GO:0050772 "positive regulation
of axonogenesis" evidence=IEA] [GO:0060272 "embryonic skeletal
joint morphogenesis" evidence=IEA] [GO:0060351 "cartilage
development involved in endochondral bone morphogenesis"
evidence=IEA] [GO:0060415 "muscle tissue morphogenesis"
evidence=IEA] [GO:2000172 "regulation of branching morphogenesis of
a nerve" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0001501 "skeletal system development" evidence=TAS] [GO:0007399
"nervous system development" evidence=TAS] [GO:0007507 "heart
development" evidence=TAS] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
GO:GO:0007399 GO:GO:0007507 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0001501 HOGENOM:HOG000231518
InterPro:IPR003654 Pfam:PF03826 PROSITE:PS50803 GO:GO:0000976
EMBL:AJ002367 EMBL:AJ002368 EMBL:BC008829 EMBL:AF022654
EMBL:AF023203 IPI:IPI00218369 IPI:IPI00295006 IPI:IPI00793628
RefSeq:NP_001157150.1 RefSeq:NP_003021.3 RefSeq:NP_006875.2
UniGene:Hs.55967 ProteinModelPortal:O60902 SMR:O60902 IntAct:O60902
STRING:O60902 PhosphoSite:O60902 PaxDb:O60902 PRIDE:O60902
DNASU:6474 Ensembl:ENST00000389589 Ensembl:ENST00000425436
GeneID:6474 KEGG:hsa:6474 UCSC:uc003fbr.3 UCSC:uc003fbs.3
UCSC:uc010hvw.3 CTD:6474 GeneCards:GC03M157813 HGNC:HGNC:10854
MIM:602504 neXtProt:NX_O60902 PharmGKB:PA35756 eggNOG:NOG113578
HOVERGEN:HBG007233 InParanoid:O60902 KO:K09331 OMA:CTEAGRD
OrthoDB:EOG41C6X2 GenomeRNAi:6474 NextBio:25151 ArrayExpress:O60902
Bgee:O60902 CleanEx:HS_SHOX2 Genevestigator:O60902
GermOnline:ENSG00000168779 Uniprot:O60902
Length = 331
Score = 143 (55.4 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 31/88 (35%), Positives = 48/88 (54%)
Query: 75 DNVEGASGDDQEANEDGPPRKKKYHRHTPHQIQELESFFKECPHPDEKQRSELSRRLGLE 134
D E A G + E R+ + + T Q+ ELE F E +PD R ELS+RLGL
Sbjct: 122 DRKEDAKGMEDEGQTKIKQRRSRTN-FTLEQLNELERLFDETHYPDAFMREELSQRLGLS 180
Query: 135 SKQIKFWFQNRRTQMKTQMER-HENIIL 161
+++ WFQNRR + + Q + H+ +++
Sbjct: 181 EARVQVWFQNRRAKCRKQENQLHKGVLI 208
>TAIR|locus:2154724 [details] [associations]
symbol:HB52 "homeobox protein 52" species:3702
"Arabidopsis thaliana" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM;IEA;ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0009637 "response
to blue light" evidence=IEP] [GO:0009646 "response to absence of
light" evidence=IEP] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 GO:GO:0009637
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009646 EMBL:AB007644
EMBL:BT015927 EMBL:BT021920 EMBL:AK229211 IPI:IPI00520413
RefSeq:NP_200209.1 UniGene:At.29523 ProteinModelPortal:Q9FN29
SMR:Q9FN29 EnsemblPlants:AT5G53980.1 GeneID:835481
KEGG:ath:AT5G53980 GeneFarm:3987 TAIR:At5g53980 eggNOG:NOG240187
HOGENOM:HOG000029156 InParanoid:Q9FN29 OMA:DELYACF PhylomeDB:Q9FN29
ProtClustDB:CLSN2916425 Genevestigator:Q9FN29 GermOnline:AT5G53980
Uniprot:Q9FN29
Length = 156
Score = 123 (48.4 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 30/93 (32%), Positives = 51/93 (54%)
Query: 95 KKKYHRHTPHQIQELESFFKECPHPDEKQRSELSRRLGLESKQIKFWFQNRRTQMKTQME 154
K K R T Q+++LE F + + +LS +LGL +Q+ WFQN+R + KTQ
Sbjct: 9 KNKKKRLTQDQVRQLEKCFTMNKKLEPDLKLQLSNQLGLPQRQVAVWFQNKRARFKTQSL 68
Query: 155 RHENIILRQEH-----DKLRAENEM--LKDAMK 180
++ L+ +H DK + E+++ L+D +K
Sbjct: 69 EVQHCTLQSKHEAALSDKAKLEHQVQFLQDELK 101
>UNIPROTKB|Q9NZR4 [details] [associations]
symbol:VSX1 "Visual system homeobox 1" species:9606 "Homo
sapiens" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0050896 "response to stimulus" evidence=IEA]
[GO:0007601 "visual perception" evidence=IEA] [GO:0042551 "neuron
maturation" evidence=IEA] [GO:0060040 "retinal bipolar neuron
differentiation" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0007601
GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 GO:GO:0050896
Gene3D:1.10.10.60 SUPFAM:SSF46689 EMBL:AL080312 GO:GO:0060040
GO:GO:0042551 Orphanet:98973 eggNOG:NOG237888 InterPro:IPR023339
PROSITE:PS51496 CTD:30813 HOVERGEN:HBG036251 KO:K09335 OMA:WGSDHLK
EMBL:AF176797 EMBL:AF251033 EMBL:AF251034 EMBL:DQ854807
EMBL:DQ854808 EMBL:DQ854809 EMBL:DQ854810 EMBL:DQ854811
EMBL:DQ854812 EMBL:BC126228 EMBL:BC136497 EMBL:GU138372
IPI:IPI00165074 IPI:IPI00215633 IPI:IPI00215634 IPI:IPI00215635
IPI:IPI00886819 IPI:IPI00909178 IPI:IPI00915914 IPI:IPI00943354
RefSeq:NP_001243200.1 RefSeq:NP_001243201.1 RefSeq:NP_055403.2
RefSeq:NP_955457.1 UniGene:Hs.274264 ProteinModelPortal:Q9NZR4
SMR:Q9NZR4 STRING:Q9NZR4 PhosphoSite:Q9NZR4 DMDM:25009572
PRIDE:Q9NZR4 Ensembl:ENST00000376707 Ensembl:ENST00000376709
Ensembl:ENST00000398332 Ensembl:ENST00000409285
Ensembl:ENST00000409958 Ensembl:ENST00000424574
Ensembl:ENST00000429762 Ensembl:ENST00000444511
Ensembl:ENST00000451258 GeneID:30813 KEGG:hsa:30813 UCSC:uc002wuf.3
UCSC:uc002wug.1 UCSC:uc010gdd.2 UCSC:uc010gdf.2
GeneCards:GC20M025051 HGNC:HGNC:12723 MIM:122000 MIM:148300
MIM:605020 MIM:614195 neXtProt:NX_Q9NZR4 Orphanet:2335
PharmGKB:PA37334 InParanoid:Q9NZR4 PhylomeDB:Q9NZR4
GenomeRNAi:30813 NextBio:52864 Bgee:Q9NZR4 CleanEx:HS_VSX1
Genevestigator:Q9NZR4 GermOnline:ENSG00000100987 Uniprot:Q9NZR4
Length = 365
Score = 143 (55.4 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 34/101 (33%), Positives = 54/101 (53%)
Query: 57 PSVVGRIREEEFESRSGSDNVEGASGDDQEANEDGPPRKKKYHR--HTPHQIQELESFFK 114
P +GR + + S S D+ + +D +A+ RKK+ HR T HQ++ELE F
Sbjct: 126 PPALGRQKRSDSVSTSDEDS-QSEDRNDLKASPTLGKRKKRRHRTVFTAHQLEELEKAFS 184
Query: 115 ECPHPDEKQRSELSRRLGLESKQIKFWFQNRRTQMKTQMER 155
E +PD R L+ + L +I+ WFQNRR + + + +R
Sbjct: 185 EAHYPDVYAREMLAVKTELPEDRIQVWFQNRRAKWRKREKR 225
>TAIR|locus:2049614 [details] [associations]
symbol:HB17 "homeobox-leucine zipper protein 17"
species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM;IEA;ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] InterPro:IPR001356
InterPro:IPR003106 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 Pfam:PF02183 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00340 SMART:SM00389 GO:GO:0005634 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 KO:K09338 EMBL:AJ431181
EMBL:AC005560 IPI:IPI00540169 PIR:F84424 RefSeq:NP_178252.2
UniGene:At.42490 HSSP:P01366 ProteinModelPortal:Q8S9N6 SMR:Q8S9N6
PRIDE:Q8S9N6 EnsemblPlants:AT2G01430.1 GeneID:814671
KEGG:ath:AT2G01430 GeneFarm:3960 TAIR:At2g01430 eggNOG:NOG248755
HOGENOM:HOG000241612 InParanoid:Q8S9N6 OMA:PRCERIT PhylomeDB:Q8S9N6
ProtClustDB:CLSN2917976 Genevestigator:Q8S9N6 GermOnline:AT2G01430
Uniprot:Q8S9N6
Length = 275
Score = 140 (54.3 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 46/116 (39%), Positives = 66/116 (56%)
Query: 82 GDDQE-ANEDG--PPRKKKYHRHTPHQIQELESFFKECPHPDEKQRSELSRRLGLESKQI 138
GDD+E +++DG PPRKK R T Q + LE F++ + KQ+ L++ L L +QI
Sbjct: 123 GDDEEFSHDDGSAPPRKKL--RLTREQSRLLEDSFRQNHTLNPKQKEVLAKHLMLRPRQI 180
Query: 139 KFWFQNRRTQMK---TQME----RHENIILRQEHDKLRAENEMLKDAMK-NPTCNN 186
+ WFQNRR + K T+ME + L +E+ +L E E L+ AMK PT N
Sbjct: 181 EVWFQNRRARSKLKQTEMECEYLKRWFGSLTEENHRLHREVEELR-AMKVGPTTVN 235
>WB|WBGene00003377 [details] [associations]
symbol:mls-2 species:6239 "Caenorhabditis elegans"
[GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0042661 "regulation of mesodermal cell
fate specification" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0000132 "establishment of mitotic
spindle orientation" evidence=IMP] [GO:0008284 "positive regulation
of cell proliferation" evidence=IMP] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IMP] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0000132 GO:GO:0002119
GO:GO:0008284 GO:GO:0043565 GO:GO:0045944 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104206 GO:GO:0042661 HSSP:P13297
eggNOG:NOG312519 EMBL:FO080826 RefSeq:NP_508815.2
ProteinModelPortal:Q18533 SMR:Q18533 STRING:Q18533
EnsemblMetazoa:C39E6.4 GeneID:180751 KEGG:cel:CELE_C39E6.4
UCSC:C39E6.4 CTD:180751 WormBase:C39E6.4 HOGENOM:HOG000020310
InParanoid:Q18533 OMA:MTTMSSQ NextBio:910768 Uniprot:Q18533
Length = 341
Score = 142 (55.0 bits), Expect = 1.7e-06, P = 1.7e-06
Identities = 43/125 (34%), Positives = 61/125 (48%)
Query: 52 GEQFDPSVVGRIREEEFESRSGS-------DNVEGASGDDQEANEDGPP--RKKKYHR-H 101
GE+ D G+ E +S GS D+ + G D EAN P RKKK
Sbjct: 150 GEEKDEKSEGKDGETR-DSTGGSPLESDAEDDDDIGRGSDDEANSSDPSQNRKKKTRTVF 208
Query: 102 TPHQIQELESFFKECP-HPDEKQRSELSRRLGLESKQIKFWFQNRRTQMKTQMERHENII 160
+ Q+ +LE F EC + ++RS L+++L L Q+K WFQNRR + K Q + + I
Sbjct: 209 SRSQVSQLEMMF-ECKRYLSSQERSNLAQKLHLTETQVKIWFQNRRNKFKRQAQTDDTNI 267
Query: 161 LRQEH 165
Q H
Sbjct: 268 SLQMH 272
>ZFIN|ZDB-GENE-020905-5 [details] [associations]
symbol:prrx1a "paired related homeobox 1a"
species:7955 "Danio rerio" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 ZFIN:ZDB-GENE-020905-5 GO:GO:0007275 GO:GO:0005634
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
HOGENOM:HOG000231518 InterPro:IPR003654 Pfam:PF03826
PROSITE:PS50803 GeneTree:ENSGT00700000104279 HSSP:P06601
HOVERGEN:HBG021349 OrthoDB:EOG4RR6J8 eggNOG:NOG309174 EMBL:BX548024
EMBL:BC053228 IPI:IPI00493267 RefSeq:NP_999899.1 UniGene:Dr.32622
SMR:Q7T373 Ensembl:ENSDART00000041365 GeneID:406431 KEGG:dre:406431
CTD:406431 InParanoid:Q7T373 OMA:CANNTTA NextBio:20818028
Uniprot:Q7T373
Length = 245
Score = 138 (53.6 bits), Expect = 1.8e-06, P = 1.8e-06
Identities = 41/139 (29%), Positives = 72/139 (51%)
Query: 36 SLSIKNAMDAGEMG-LIGEQFDPSV--VGRIREEEFESRSGSDNVEGASGDDQEAN-EDG 91
+ S+ + +D E ++G Q + S GR E SGSD + ++++ N E+
Sbjct: 35 NFSVSHLLDLEEAREMVGAQAEESAGEAGRSMLESPGLTSGSDTTQQ---ENEQLNAEEK 91
Query: 92 PPRKKKYHRHT--PHQIQELESFFKECPHPDEKQRSELSRRLGLESKQIKFWFQNRRTQM 149
RK++ +R T Q+Q LE F+ +PD R +L+RR+ L +++ WFQNRR +
Sbjct: 92 KKRKQRRNRTTFNSSQLQALERVFERTHYPDAFVREDLARRVNLTEARVQVWFQNRRAKF 151
Query: 150 KTQMERHENIILRQEHDKL 168
+ R+E +L ++ L
Sbjct: 152 R----RNERAMLASKNASL 166
>UNIPROTKB|F1P4U9 [details] [associations]
symbol:HOXD8 "Homeobox protein Hox-D8" species:9031 "Gallus
gallus" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
GO:GO:0007275 GO:GO:0005634 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0000976
GeneTree:ENSGT00700000104054 IPI:IPI00576774 EMBL:AADN02020025
EMBL:AADN02020026 EMBL:AADN02020027 EMBL:AADN02020028
EMBL:AADN02020029 EMBL:AADN02020030 Ensembl:ENSGALT00000015083
ArrayExpress:F1P4U9 Uniprot:F1P4U9
Length = 148
Score = 121 (47.7 bits), Expect = 2.1e-06, P = 2.1e-06
Identities = 28/82 (34%), Positives = 44/82 (53%)
Query: 92 PPRKKKYHRHTPHQIQELESFFKECPHPDEKQRSELSRRLGLESKQIKFWFQNRRTQMKT 151
P R++ ++ Q ELE F P+ K+R E+S LGL +Q+K WFQNRR + K
Sbjct: 53 PGRRRGRQTYSRFQTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWKK 112
Query: 152 QMERHENIILRQEHDKLRAENE 173
+ + + +QE + A+ E
Sbjct: 113 ENNKDKFPASKQEGKEGEAKKE 134
>UNIPROTKB|J9NTV3 [details] [associations]
symbol:GSC2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 EMBL:AAEX03014876
EMBL:AAEX03014875 Ensembl:ENSCAFT00000044353
GeneTree:ENSGT00700000105407 Uniprot:J9NTV3
Length = 158
Score = 121 (47.7 bits), Expect = 2.1e-06, P = 2.1e-06
Identities = 26/76 (34%), Positives = 42/76 (55%)
Query: 79 GASGDDQEANEDGPPRKKKYHR--HTPHQIQELESFFKECPHPDEKQRSELSRRLGLESK 136
G SG A GP R+ + HR + Q+Q LE+ F + +PD R L+ R+ L +
Sbjct: 63 GGSGALPGAGGPGPQRRTRRHRTIFSEEQLQALEALFVQNQYPDVGTRERLAGRIRLREE 122
Query: 137 QIKFWFQNRRTQMKTQ 152
+++ WF+NRR + + Q
Sbjct: 123 RVEVWFKNRRAKWRHQ 138
>MGI|MGI:1201673 [details] [associations]
symbol:Shox2 "short stature homeobox 2" species:10090 "Mus
musculus" [GO:0000122 "negative regulation of transcription from
RNA polymerase II promoter" evidence=IDA] [GO:0000976
"transcription regulatory region sequence-specific DNA binding"
evidence=IEA] [GO:0001649 "osteoblast differentiation"
evidence=IMP] [GO:0002053 "positive regulation of mesenchymal cell
proliferation" evidence=IMP] [GO:0002062 "chondrocyte
differentiation" evidence=IMP] [GO:0002063 "chondrocyte
development" evidence=IMP] [GO:0003170 "heart valve development"
evidence=IMP] [GO:0003209 "cardiac atrium morphogenesis"
evidence=IMP] [GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0030326 "embryonic limb morphogenesis" evidence=IMP]
[GO:0032330 "regulation of chondrocyte differentiation"
evidence=IMP] [GO:0035115 "embryonic forelimb morphogenesis"
evidence=IMP] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0045880 "positive regulation of smoothened
signaling pathway" evidence=IMP] [GO:0045944 "positive regulation
of transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0048557 "embryonic digestive tract morphogenesis" evidence=IMP]
[GO:0048598 "embryonic morphogenesis" evidence=IMP] [GO:0048743
"positive regulation of skeletal muscle fiber development"
evidence=IMP] [GO:0050772 "positive regulation of axonogenesis"
evidence=IMP] [GO:0060272 "embryonic skeletal joint morphogenesis"
evidence=IMP] [GO:0060351 "cartilage development involved in
endochondral bone morphogenesis" evidence=IMP] [GO:0060415 "muscle
tissue morphogenesis" evidence=IMP] [GO:2000172 "regulation of
branching morphogenesis of a nerve" evidence=IMP]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 EMBL:U66918 MGI:MGI:1201673
GO:GO:0005634 GO:GO:0045944 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0000122 GO:GO:0030326 GO:GO:0050772
GO:GO:0032330 GO:GO:0001649 HOGENOM:HOG000231518 InterPro:IPR003654
Pfam:PF03826 PROSITE:PS50803 GO:GO:0000976
GeneTree:ENSGT00700000104279 GO:GO:0060272 GO:GO:0002053
GO:GO:0048743 GO:GO:0060351 GO:GO:0002063 GO:GO:0045880
GO:GO:0003209 GO:GO:0048557 GO:GO:0060415 GO:GO:2000172 CTD:6474
eggNOG:NOG113578 HOVERGEN:HBG007233 KO:K09331 OMA:CTEAGRD
OrthoDB:EOG41C6X2 EMBL:U67055 EMBL:U65071 EMBL:U65072
IPI:IPI00230342 IPI:IPI00625691 RefSeq:NP_038693.1 UniGene:Mm.39093
ProteinModelPortal:P70390 SMR:P70390 STRING:P70390
PhosphoSite:P70390 PRIDE:P70390 Ensembl:ENSMUST00000029422
Ensembl:ENSMUST00000162060 Ensembl:ENSMUST00000162439 GeneID:20429
KEGG:mmu:20429 UCSC:uc008pld.1 UCSC:uc008ple.1 InParanoid:P70390
NextBio:298446 Bgee:P70390 CleanEx:MM_SHOX2 Genevestigator:P70390
GermOnline:ENSMUSG00000027833 GO:GO:0003170 Uniprot:P70390
Length = 331
Score = 141 (54.7 bits), Expect = 2.1e-06, P = 2.1e-06
Identities = 32/84 (38%), Positives = 46/84 (54%)
Query: 83 DDQEANEDGPPRKKKYHRH----TPHQIQELESFFKECPHPDEKQRSELSRRLGLESKQI 138
DD + ED K K R T Q+ ELE F E +PD R ELS+RLGL ++
Sbjct: 125 DDAKGMEDEGQTKIKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARV 184
Query: 139 KFWFQNRRTQMKTQMER-HENIIL 161
+ WFQNRR + + Q + H+ +++
Sbjct: 185 QVWFQNRRAKCRKQENQLHKGVLI 208
>UNIPROTKB|A6NLG4 [details] [associations]
symbol:SHOX2 "cDNA FLJ38019 fis, clone CTONG2012758, highly
similar to Short stature homeobox protein 2" species:9606 "Homo
sapiens" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 EMBL:CH471052
GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
HOGENOM:HOG000231518 InterPro:IPR003654 Pfam:PF03826
PROSITE:PS50803 GO:GO:0000976 UniGene:Hs.55967 HGNC:HGNC:10854
HOVERGEN:HBG007233 NextBio:25151 EMBL:AC112502 EMBL:AK095338
IPI:IPI01024865 SMR:A6NLG4 STRING:A6NLG4 Ensembl:ENST00000441443
Ensembl:ENST00000490689 Uniprot:A6NLG4
Length = 190
Score = 131 (51.2 bits), Expect = 2.1e-06, P = 2.1e-06
Identities = 25/61 (40%), Positives = 38/61 (62%)
Query: 102 TPHQIQELESFFKECPHPDEKQRSELSRRLGLESKQIKFWFQNRRTQMKTQMER-HENII 160
T Q+ ELE F E +PD R ELS+RLGL +++ WFQNRR + + Q + H+ ++
Sbjct: 19 TLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQVWFQNRRAKCRKQENQLHKGVL 78
Query: 161 L 161
+
Sbjct: 79 I 79
>FB|FBgn0020617 [details] [associations]
symbol:Rx "Retinal Homeobox" species:7227 "Drosophila
melanogaster" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS;NAS] [GO:0007420
"brain development" evidence=NAS] [GO:0043565 "sequence-specific
DNA binding" evidence=IEA] [GO:0022008 "neurogenesis" evidence=IMP]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
EMBL:AE013599 GO:GO:0005634 GO:GO:0022008 GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689
InterPro:IPR003654 Pfam:PF03826 PROSITE:PS50803 eggNOG:NOG261733
GeneTree:ENSGT00700000104256 EMBL:AJ223300 EMBL:AY118390
RefSeq:NP_726006.2 UniGene:Dm.3064 ProteinModelPortal:Q9W2Q1
SMR:Q9W2Q1 STRING:Q9W2Q1 EnsemblMetazoa:FBtr0071518 GeneID:37367
KEGG:dme:Dmel_CG10052 CTD:37367 FlyBase:FBgn0020617
InParanoid:Q9W2Q1 OMA:MVEANQL OrthoDB:EOG43BK55 PhylomeDB:Q9W2Q1
GenomeRNAi:37367 NextBio:803298 Bgee:Q9W2Q1 GermOnline:CG10052
Uniprot:Q9W2Q1
Length = 873
Score = 147 (56.8 bits), Expect = 2.3e-06, P = 2.3e-06
Identities = 42/131 (32%), Positives = 66/131 (50%)
Query: 41 NAMDAGEMGLIGEQFDPSVVGRIRE-EEFESRSGSDNVEG-ASGDDQEANEDGPPRKKKY 98
N+ D GE + D V G E+ + S+ E SG D E +D KKK+
Sbjct: 472 NSGDHGER--LNADSDSLVNGSCASSEDLNQTNSSEQGEKITSGSDDEGQDDNCA-KKKH 528
Query: 99 HRH----TPHQIQELESFFKECPHPDEKQRSELSRRLGLESKQIKFWFQNRRTQMKTQME 154
R+ T +Q+ ELE F++ +PD R EL+ ++ L +++ WFQNRR + + Q E
Sbjct: 529 RRNRTTFTTYQLHELERAFEKSHYPDVYSREELAMKVNLPEVRVQVWFQNRRAKWRRQ-E 587
Query: 155 RHENIILRQEH 165
+ E++ L H
Sbjct: 588 KSESLRLGLTH 598
>UNIPROTKB|Q9PVX0 [details] [associations]
symbol:RX2 "Retinal homeobox protein Rx2" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0007275 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689
InterPro:IPR003654 Pfam:PF03826 PROSITE:PS50803 HOVERGEN:HBG021349
EMBL:AB020318 IPI:IPI00590568 UniGene:Gga.27
ProteinModelPortal:Q9PVX0 SMR:Q9PVX0 Uniprot:Q9PVX0
Length = 317
Score = 140 (54.3 bits), Expect = 2.4e-06, P = 2.4e-06
Identities = 29/94 (30%), Positives = 52/94 (55%)
Query: 61 GRIREEEFESRSGSDNVEGASGDDQEANEDGPPRKKKYHR--HTPHQIQELESFFKECPH 118
GR +E + + G GD + ++E+ P +K + +R T +Q+ ELE F++ +
Sbjct: 87 GRFQEPYCPGSASPELPAGDGGDGKPSDEEQPKKKHRRNRTTFTTYQLHELERAFEKSHY 146
Query: 119 PDEKQRSELSRRLGLESKQIKFWFQNRRTQMKTQ 152
PD R EL+ ++ L +++ WFQNRR + + Q
Sbjct: 147 PDVYSREELAMKVNLPEVRVQVWFQNRRAKWRRQ 180
>UNIPROTKB|Q96QS3 [details] [associations]
symbol:ARX "Homeobox protein ARX" species:9606 "Homo
sapiens" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
[GO:0007411 "axon guidance" evidence=IEA] [GO:0021759 "globus
pallidus development" evidence=IEA] [GO:0021800 "cerebral cortex
tangential migration" evidence=IEA] [GO:0021831 "embryonic
olfactory bulb interneuron precursor migration" evidence=IEA]
[GO:0021846 "cell proliferation in forebrain" evidence=IEA]
[GO:0021853 "cerebral cortex GABAergic interneuron migration"
evidence=IEA] [GO:0042127 "regulation of cell proliferation"
evidence=IEA] [GO:0046622 "positive regulation of organ growth"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0007411 GO:GO:0001764 GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0042127 Orphanet:777 GO:GO:0046622 InterPro:IPR003654
Pfam:PF03826 PROSITE:PS50803 eggNOG:NOG313402 KO:K09452
HOGENOM:HOG000012381 HOVERGEN:HBG004285 EMBL:AY038071
IPI:IPI00045066 RefSeq:NP_620689.1 UniGene:Hs.300304
ProteinModelPortal:Q96QS3 SMR:Q96QS3 STRING:Q96QS3
PhosphoSite:Q96QS3 DMDM:27923733 PaxDb:Q96QS3 PRIDE:Q96QS3
Ensembl:ENST00000379044 GeneID:170302 KEGG:hsa:170302
UCSC:uc004dbp.4 CTD:170302 GeneCards:GC0XM025021 HGNC:HGNC:18060
MIM:300004 MIM:300215 MIM:300382 MIM:300419 MIM:308350 MIM:309510
neXtProt:NX_Q96QS3 Orphanet:1934 Orphanet:2508 Orphanet:94083
Orphanet:3175 Orphanet:3451 Orphanet:452 PharmGKB:PA25024
InParanoid:Q96QS3 OMA:VTHPEER PhylomeDB:Q96QS3 GenomeRNAi:170302
NextBio:88881 Bgee:Q96QS3 CleanEx:HS_ARX Genevestigator:Q96QS3
GermOnline:ENSG00000004848 GO:GO:0021846 GO:GO:0021853
GO:GO:0021800 GO:GO:0021831 GO:GO:0021759 Uniprot:Q96QS3
Length = 562
Score = 144 (55.7 bits), Expect = 2.6e-06, P = 2.6e-06
Identities = 36/111 (32%), Positives = 59/111 (53%)
Query: 42 AMDAGEMGLIGEQFDPSVVGRIREEEFESRSGSDNVEGASGDDQEANEDGPPRKKKYHR- 100
A A + G + P + E+ E + G D+V ++G D E E RK++ +R
Sbjct: 276 AAAAAAVATEGGELSPKEELLLHPEDAEGKDGEDSVCLSAGSDSE--EGLLKRKQRRYRT 333
Query: 101 -HTPHQIQELESFFKECPHPDEKQRSELSRRLGLESKQIKFWFQNRRTQMK 150
T +Q++ELE F++ +PD R EL+ RL L +++ WFQNRR + +
Sbjct: 334 TFTSYQLEELERAFQKTHYPDVFTREELAMRLDLTEARVQVWFQNRRAKWR 384
>MGI|MGI:1097716 [details] [associations]
symbol:Arx "aristaless related homeobox" species:10090 "Mus
musculus" [GO:0001764 "neuron migration" evidence=IMP] [GO:0003677
"DNA binding" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IDA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IC] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0007411 "axon guidance" evidence=IMP] [GO:0021759
"globus pallidus development" evidence=IMP] [GO:0021772 "olfactory
bulb development" evidence=IMP] [GO:0021800 "cerebral cortex
tangential migration" evidence=IMP] [GO:0021831 "embryonic
olfactory bulb interneuron precursor migration" evidence=IMP]
[GO:0021846 "cell proliferation in forebrain" evidence=IMP]
[GO:0021853 "cerebral cortex GABAergic interneuron migration"
evidence=IMP] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0030900 "forebrain development" evidence=IMP] [GO:0042127
"regulation of cell proliferation" evidence=IMP] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0046622 "positive
regulation of organ growth" evidence=IMP] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 MGI:MGI:1097716 GO:GO:0005634
GO:GO:0007411 GO:GO:0001764 GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0042127
GO:GO:0046622 InterPro:IPR003654 Pfam:PF03826 PROSITE:PS50803
eggNOG:NOG313402 KO:K09452 GeneTree:ENSGT00700000104279
HOGENOM:HOG000012381 HOVERGEN:HBG004285 OrthoDB:EOG43TZW9
CTD:170302 GO:GO:0021846 GO:GO:0021853 GO:GO:0021800 GO:GO:0021831
GO:GO:0021759 EMBL:AB006103 EMBL:AB026674 EMBL:AL590876
EMBL:BC052033 IPI:IPI00126550 RefSeq:NP_031518.2 UniGene:Mm.275547
ProteinModelPortal:O35085 SMR:O35085 STRING:O35085
PhosphoSite:O35085 PRIDE:O35085 Ensembl:ENSMUST00000046565
Ensembl:ENSMUST00000113947 GeneID:11878 KEGG:mmu:11878
UCSC:uc009tsq.1 InParanoid:O35085 NextBio:279907 Bgee:O35085
CleanEx:MM_ARX Genevestigator:O35085 GermOnline:ENSMUSG00000035277
Uniprot:O35085
Length = 564
Score = 144 (55.7 bits), Expect = 2.6e-06, P = 2.6e-06
Identities = 36/111 (32%), Positives = 59/111 (53%)
Query: 42 AMDAGEMGLIGEQFDPSVVGRIREEEFESRSGSDNVEGASGDDQEANEDGPPRKKKYHR- 100
A A + G + P + E+ E + G D+V ++G D E E RK++ +R
Sbjct: 278 AAAAAAVATEGGELSPKEELLLHPEDAEGKDGEDSVCLSAGSDSE--EGLLKRKQRRYRT 335
Query: 101 -HTPHQIQELESFFKECPHPDEKQRSELSRRLGLESKQIKFWFQNRRTQMK 150
T +Q++ELE F++ +PD R EL+ RL L +++ WFQNRR + +
Sbjct: 336 TFTSYQLEELERAFQKTHYPDVFTREELAMRLDLTEARVQVWFQNRRAKWR 386
>RGD|1562672 [details] [associations]
symbol:Arx "aristaless related homeobox" species:10116 "Rattus
norvegicus" [GO:0001764 "neuron migration" evidence=ISO]
[GO:0003674 "molecular_function" evidence=ND] [GO:0003682
"chromatin binding" evidence=ISO] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0007411 "axon guidance" evidence=ISO] [GO:0008150
"biological_process" evidence=ND] [GO:0021759 "globus pallidus
development" evidence=ISO] [GO:0021772 "olfactory bulb development"
evidence=ISO] [GO:0021800 "cerebral cortex tangential migration"
evidence=ISO] [GO:0021831 "embryonic olfactory bulb interneuron
precursor migration" evidence=ISO] [GO:0021846 "cell proliferation
in forebrain" evidence=ISO] [GO:0021853 "cerebral cortex GABAergic
interneuron migration" evidence=ISO] [GO:0030154 "cell
differentiation" evidence=IEA] [GO:0030900 "forebrain development"
evidence=ISO] [GO:0042127 "regulation of cell proliferation"
evidence=ISO] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0046622 "positive regulation of organ growth"
evidence=ISO] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 RGD:1562672 GO:GO:0005634 GO:GO:0007411 GO:GO:0001764
GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0042127 GO:GO:0046622 InterPro:IPR003654
Pfam:PF03826 PROSITE:PS50803 eggNOG:NOG313402 KO:K09452
HOGENOM:HOG000012381 HOVERGEN:HBG004285 CTD:170302 GO:GO:0021846
GO:GO:0021853 GO:GO:0021800 GO:GO:0021831 GO:GO:0021759
EMBL:EF638804 IPI:IPI00858330 RefSeq:NP_001093644.1
UniGene:Rn.22484 ProteinModelPortal:A6YP92 SMR:A6YP92 STRING:A6YP92
GeneID:317268 KEGG:rno:317268 NextBio:671526 ArrayExpress:A6YP92
Genevestigator:A6YP92 Uniprot:A6YP92
Length = 566
Score = 144 (55.7 bits), Expect = 2.6e-06, P = 2.6e-06
Identities = 36/111 (32%), Positives = 59/111 (53%)
Query: 42 AMDAGEMGLIGEQFDPSVVGRIREEEFESRSGSDNVEGASGDDQEANEDGPPRKKKYHR- 100
A A + G + P + E+ E + G D+V ++G D E E RK++ +R
Sbjct: 280 AAAAAAVATEGGELSPKEELLLHPEDAEGKDGEDSVCLSAGSDSE--EGLLKRKQRRYRT 337
Query: 101 -HTPHQIQELESFFKECPHPDEKQRSELSRRLGLESKQIKFWFQNRRTQMK 150
T +Q++ELE F++ +PD R EL+ RL L +++ WFQNRR + +
Sbjct: 338 TFTSYQLEELERAFQKTHYPDVFTREELAMRLDLTEARVQVWFQNRRAKWR 388
>UNIPROTKB|D4A5S8 [details] [associations]
symbol:Arx "Homeobox protein ARX" species:10116 "Rattus
norvegicus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0007275 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR003654
Pfam:PF03826 PROSITE:PS50803 IPI:IPI00950113
Ensembl:ENSRNOT00000067410 ArrayExpress:D4A5S8 Uniprot:D4A5S8
Length = 566
Score = 144 (55.7 bits), Expect = 2.6e-06, P = 2.6e-06
Identities = 36/111 (32%), Positives = 59/111 (53%)
Query: 42 AMDAGEMGLIGEQFDPSVVGRIREEEFESRSGSDNVEGASGDDQEANEDGPPRKKKYHR- 100
A A + G + P + E+ E + G D+V ++G D E E RK++ +R
Sbjct: 280 AAAAAAVATEGGELSPKEELLLHPEDAEGKDGEDSVCLSAGSDSE--EGLLKRKQRRYRT 337
Query: 101 -HTPHQIQELESFFKECPHPDEKQRSELSRRLGLESKQIKFWFQNRRTQMK 150
T +Q++ELE F++ +PD R EL+ RL L +++ WFQNRR + +
Sbjct: 338 TFTSYQLEELERAFQKTHYPDVFTREELAMRLDLTEARVQVWFQNRRAKWR 388
>UNIPROTKB|F1LQW2 [details] [associations]
symbol:Arx "Homeobox protein ARX" species:10116 "Rattus
norvegicus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 RGD:1562672 GO:GO:0005634 GO:GO:0007411 GO:GO:0001764
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0042127 GO:GO:0046622 InterPro:IPR003654 Pfam:PF03826
PROSITE:PS50803 GeneTree:ENSGT00700000104279 GO:GO:0021846
GO:GO:0021853 GO:GO:0021800 GO:GO:0021831 GO:GO:0021759
IPI:IPI00858330 Ensembl:ENSRNOT00000049655 ArrayExpress:F1LQW2
Uniprot:F1LQW2
Length = 566
Score = 144 (55.7 bits), Expect = 2.6e-06, P = 2.6e-06
Identities = 36/111 (32%), Positives = 59/111 (53%)
Query: 42 AMDAGEMGLIGEQFDPSVVGRIREEEFESRSGSDNVEGASGDDQEANEDGPPRKKKYHR- 100
A A + G + P + E+ E + G D+V ++G D E E RK++ +R
Sbjct: 280 AAAAAAVATEGGELSPKEELLLHPEDAEGKDGEDSVCLSAGSDSE--EGLLKRKQRRYRT 337
Query: 101 -HTPHQIQELESFFKECPHPDEKQRSELSRRLGLESKQIKFWFQNRRTQMK 150
T +Q++ELE F++ +PD R EL+ RL L +++ WFQNRR + +
Sbjct: 338 TFTSYQLEELERAFQKTHYPDVFTREELAMRLDLTEARVQVWFQNRRAKWR 388
>FB|FBgn0051481 [details] [associations]
symbol:pb "proboscipedia" species:7227 "Drosophila
melanogaster" [GO:0005634 "nucleus" evidence=ISS;NAS;IDA]
[GO:0006357 "regulation of transcription from RNA polymerase II
promoter" evidence=ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS;NAS] [GO:0007381
"specification of segmental identity, labial segment"
evidence=IMP;NAS] [GO:0007382 "specification of segmental identity,
maxillary segment" evidence=IMP;NAS] [GO:0043565 "sequence-specific
DNA binding" evidence=IEA] [GO:0048728 "proboscis development"
evidence=IMP] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 EMBL:AE014297
GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 EMBL:AE001572
eggNOG:NOG321520 GO:GO:0048728 GO:GO:0007381 EMBL:S94723
EMBL:S94709 EMBL:S94714 EMBL:S94717 EMBL:S94719 EMBL:X63729
EMBL:X63728 PIR:S20881 RefSeq:NP_476669.3 RefSeq:NP_996161.1
RefSeq:NP_996162.1 RefSeq:NP_996163.1 UniGene:Dm.5646
ProteinModelPortal:P31264 SMR:P31264 STRING:P31264
EnsemblMetazoa:FBtr0089276 GeneID:40826 KEGG:dme:Dmel_CG31481
UCSC:CG31481-RA CTD:40826 FlyBase:FBgn0051481
GeneTree:ENSGT00700000104446 InParanoid:P31264 KO:K09302
OMA:FEAPPIN OrthoDB:EOG4H189X PhylomeDB:P31264 GenomeRNAi:40826
NextBio:820784 Bgee:P31264 GermOnline:CG31481 GO:GO:0007382
Uniprot:P31264
Length = 782
Score = 143 (55.4 bits), Expect = 2.9e-06, Sum P(3) = 2.9e-06
Identities = 48/184 (26%), Positives = 93/184 (50%)
Query: 25 MASGAIAQFPLSLSIKNAMDAG-EMGLIGEQFD--PSVVGR--IREEEFESRSGSDNVEG 79
+ SGAI +++++ + G +G++ + D SV ++E++ +S ++N +G
Sbjct: 125 VGSGAIGGVGVNVNVNVGVGVGYPVGVVPQTPDGMDSVPEYPWMKEKKTSRKSSNNNNQG 184
Query: 80 ASGDDQEANEDGPPRKKKYHRHTPHQIQELESFFKECPHPDEKQRSELSRRLGLESKQIK 139
+ + E+G PR+ + +T Q+ ELE F + +R E++ L L +Q+K
Sbjct: 185 DNSITEFVPENGLPRRLRT-AYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQVK 243
Query: 140 FWFQNRRTQMKTQ-MERHENIILRQEHDKLRAENEMLKDAMKNP--TCNNCGGPA--VPG 194
WFQNRR + K Q + + ++ D L+ +++ D+ N +C C P+ +P
Sbjct: 244 VWFQNRRMKHKRQTLSKTDD---EDNKDSLKGDDDQ-SDSNSNSKKSCQGCELPSDDIPD 299
Query: 195 SVSN 198
S SN
Sbjct: 300 STSN 303
Score = 48 (22.0 bits), Expect = 2.9e-06, Sum P(3) = 2.9e-06
Identities = 19/80 (23%), Positives = 31/80 (38%)
Query: 660 DSGMLILQETWNDSSGSLVVYAPVDVPSMSMVMNGGDSTCVALLPSGFAILPDGYFGHGG 719
D G +I +E + SS + PS+ D++ V P+ A+ +
Sbjct: 378 DDGQVIKKEAVSTSSKASPFGYENSTPSLVSFRRDSDASAVGNAPTSKAVGKKRFQSAAN 437
Query: 720 LINSNGTMVKTEGSSNESGG 739
I + T + S N SGG
Sbjct: 438 AI-ATPTPLSDSNSGNGSGG 456
Score = 47 (21.6 bits), Expect = 2.9e-06, Sum P(3) = 2.9e-06
Identities = 12/24 (50%), Positives = 15/24 (62%)
Query: 233 SAGPISPQGVNSSLELGVGRNGFG 256
SAG ++P NSSLE G+ N G
Sbjct: 320 SAGNLTP---NSSLETGISSNLMG 340
Score = 46 (21.3 bits), Expect = 3.6e-06, Sum P(3) = 3.6e-06
Identities = 21/88 (23%), Positives = 39/88 (44%)
Query: 240 QGVNSSLELGVGRNGFGGVANI-PGSMMQTSLEFVEGPVMSLTMPHDRNML-IDLALTAM 297
+G N++ N G N+ P S ++T + +M T N++ D ++ +
Sbjct: 305 RGHNNNTPSATNNNPSAG--NLTPNSSLETG---ISSNLMGSTTVSASNVISADSSVASS 359
Query: 298 DELIKMAEADSPLWIKSLDGGRDVFNQE 325
L + E SP+ +K D G+ V +E
Sbjct: 360 VSLDEDIEESSPIKVKKKDDGQ-VIKKE 386
>ZFIN|ZDB-GENE-990415-4 [details] [associations]
symbol:hoxa11b "homeo box A11b" species:7955 "Danio
rerio" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0007275 "multicellular organismal
development" evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 ZFIN:ZDB-GENE-990415-4 GO:GO:0007275 GO:GO:0005634
GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 eggNOG:NOG274734
HOGENOM:HOG000231898 HOVERGEN:HBG052048 KO:K09296
InterPro:IPR021918 Pfam:PF12045 OrthoDB:EOG4KKZ3X EMBL:AF287137
EMBL:DQ060539 EMBL:Y07698 IPI:IPI00487877 RefSeq:NP_571222.1
UniGene:Dr.85393 ProteinModelPortal:Q9DDU1 SMR:Q9DDU1 GeneID:30382
KEGG:dre:30382 CTD:30382 InParanoid:Q9DDU1 NextBio:20806797
ArrayExpress:Q9DDU1 Uniprot:Q9DDU1
Length = 283
Score = 138 (53.6 bits), Expect = 3.0e-06, P = 3.0e-06
Identities = 42/144 (29%), Positives = 63/144 (43%)
Query: 7 SVGMGSRVVAEIFPHCHSMASGAIAQFPLSLSIKNAMDAGEMGLIGEQFDPSVVGRIREE 66
SVG V+ + F A G + P + A E S G E
Sbjct: 127 SVGRNG-VLPQAFDQFFETAYGNVENQPTEHPVDRATSKAPPP--AESGSDSCRGTDETE 183
Query: 67 EFESRSGSDNVEGASGDDQEANEDGPPRKKKYHRHTPHQIQELESFFKECPHPDEKQRSE 126
E S + G + D + +G +KK +T +QI+ELE F + ++++R +
Sbjct: 184 RCEETSSPEPSSGNNEDKFSGSSNGQKTRKKRCPYTKYQIRELEREFFFSVYINKEKRLQ 243
Query: 127 LSRRLGLESKQIKFWFQNRRTQMK 150
LSR L L +Q+K WFQNRR + K
Sbjct: 244 LSRMLNLTDRQVKIWFQNRRMKEK 267
>ZFIN|ZDB-GENE-010108-1 [details] [associations]
symbol:vox "ventral homeobox" species:7955 "Danio
rerio" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0000976
"transcription regulatory region sequence-specific DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0009953
"dorsal/ventral pattern formation" evidence=IGI] [GO:0042661
"regulation of mesodermal cell fate specification" evidence=IGI]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 Pfam:PF00046 PRINTS:PR00031
PROSITE:PS50071 SMART:SM00389 ZFIN:ZDB-GENE-010108-1 GO:GO:0005634
GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009953
GO:GO:0000976 GO:GO:0042661 EMBL:BC092695 IPI:IPI00629975
UniGene:Dr.82511 STRING:Q568V6 HOGENOM:HOG000170671
HOVERGEN:HBG098403 InParanoid:Q568V6 ArrayExpress:Q568V6
Uniprot:Q568V6
Length = 265
Score = 137 (53.3 bits), Expect = 3.2e-06, P = 3.2e-06
Identities = 34/98 (34%), Positives = 57/98 (58%)
Query: 68 FESRSGSDNVEGASGDD-QEANEDGPPRKKKYHRHTPHQIQELESFFKECPHPDEKQRSE 126
+ES + + E AS +D +A +DG R+ + + TP QI +LE F + + D +R +
Sbjct: 116 YESEAAAS--ECASVEDGHDAEKDGATRRIRT-KFTPEQIDKLEKIFNKHKYLDAGERVK 172
Query: 127 LSRRLGLESKQIKFWFQNRRTQMKTQM-ERHENIILRQ 163
+ +LGL QI+ WFQNRR ++K ++ E + +L Q
Sbjct: 173 TALKLGLSETQIRTWFQNRRMKLKREVQEMRADFLLPQ 210
>UNIPROTKB|F6Y4K5 [details] [associations]
symbol:SHOX2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 InterPro:IPR003654 Pfam:PF03826 PROSITE:PS50803
GO:GO:0000976 GeneTree:ENSGT00700000104279 CTD:6474 KO:K09331
OMA:CTEAGRD EMBL:AAEX03013721 Ensembl:ENSCAFT00000014128
RefSeq:XP_003639881.1 GeneID:485732 KEGG:cfa:485732 Uniprot:F6Y4K5
Length = 319
Score = 139 (54.0 bits), Expect = 3.2e-06, P = 3.2e-06
Identities = 30/85 (35%), Positives = 47/85 (55%)
Query: 78 EGASGDDQEANEDGPPRKKKYHRHTPHQIQELESFFKECPHPDEKQRSELSRRLGLESKQ 137
E A G + E R+ + + T Q+ ELE F E +PD R ELS+RLGL +
Sbjct: 125 EDAKGMEDEGQTKIKQRRSRTN-FTLEQLNELERLFDETHYPDAFMREELSQRLGLSEAR 183
Query: 138 IKFWFQNRRTQMKTQMER-HENIIL 161
++ WFQNRR + + Q + H+ +++
Sbjct: 184 VQVWFQNRRAKCRKQENQLHKGVLI 208
>UNIPROTKB|Q5XKR4 [details] [associations]
symbol:OTP "Homeobox protein orthopedia" species:9606 "Homo
sapiens" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0002052 "positive regulation of neuroblast
proliferation" evidence=IEA] [GO:0021879 "forebrain neuron
differentiation" evidence=IEA] [GO:0021979 "hypothalamus cell
differentiation" evidence=IEA] [GO:0021985 "neurohypophysis
development" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR003654
Pfam:PF03826 PROSITE:PS50803 GO:GO:0000976 GO:GO:0021879
GO:GO:0002052 HSSP:P06601 eggNOG:NOG256838 HOVERGEN:HBG001617
OrthoDB:EOG4FXR8D CTD:23440 EMBL:BC001800 IPI:IPI00029796
RefSeq:NP_115485.1 UniGene:Hs.202247 ProteinModelPortal:Q5XKR4
SMR:Q5XKR4 STRING:Q5XKR4 DMDM:74762283 PRIDE:Q5XKR4 DNASU:23440
Ensembl:ENST00000306422 GeneID:23440 KEGG:hsa:23440 UCSC:uc003kfg.3
GeneCards:GC05M076960 HGNC:HGNC:8518 HPA:HPA039365 MIM:604529
neXtProt:NX_Q5XKR4 PharmGKB:PA32844 HOGENOM:HOG000039976
InParanoid:Q5XKR4 OMA:RWATAGM PhylomeDB:Q5XKR4 GenomeRNAi:23440
NextBio:45713 Bgee:Q5XKR4 CleanEx:HS_OTP Genevestigator:Q5XKR4
GO:GO:0021979 GO:GO:0021985 Uniprot:Q5XKR4
Length = 325
Score = 139 (54.0 bits), Expect = 3.3e-06, P = 3.3e-06
Identities = 27/74 (36%), Positives = 42/74 (56%)
Query: 78 EGASGDDQEANEDGPPRKKKYH-RHTPHQIQELESFFKECPHPDEKQRSELSRRLGLESK 136
+G Q + G ++K++ R TP Q+ ELE F + +PD R EL+ R+GL
Sbjct: 87 QGGPNPSQAGQQQGQQKQKRHRTRFTPAQLNELERSFAKTHYPDIFMREELALRIGLTES 146
Query: 137 QIKFWFQNRRTQMK 150
+++ WFQNRR + K
Sbjct: 147 RVQVWFQNRRAKWK 160
>UNIPROTKB|F2Z5H5 [details] [associations]
symbol:OTP "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0021985
"neurohypophysis development" evidence=IEA] [GO:0021979
"hypothalamus cell differentiation" evidence=IEA] [GO:0021879
"forebrain neuron differentiation" evidence=IEA] [GO:0002052
"positive regulation of neuroblast proliferation" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0000976 "transcription regulatory
region sequence-specific DNA binding" evidence=IEA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR003654 Pfam:PF03826
PROSITE:PS50803 GeneTree:ENSGT00700000104013 GO:GO:0000976
GO:GO:0021879 GO:GO:0002052 OMA:RWATAGM GO:GO:0021979 GO:GO:0021985
EMBL:CU856635 RefSeq:XP_003123766.1 ProteinModelPortal:F2Z5H5
SMR:F2Z5H5 Ensembl:ENSSSCT00000015401 GeneID:100520724
KEGG:ssc:100520724 Uniprot:F2Z5H5
Length = 325
Score = 139 (54.0 bits), Expect = 3.3e-06, P = 3.3e-06
Identities = 27/74 (36%), Positives = 42/74 (56%)
Query: 78 EGASGDDQEANEDGPPRKKKYH-RHTPHQIQELESFFKECPHPDEKQRSELSRRLGLESK 136
+G Q + G ++K++ R TP Q+ ELE F + +PD R EL+ R+GL
Sbjct: 87 QGGPNPSQAGQQQGQQKQKRHRTRFTPAQLNELERSFAKTHYPDIFMREELALRIGLTES 146
Query: 137 QIKFWFQNRRTQMK 150
+++ WFQNRR + K
Sbjct: 147 RVQVWFQNRRAKWK 160
>MGI|MGI:99835 [details] [associations]
symbol:Otp "orthopedia homolog (Drosophila)" species:10090
"Mus musculus" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0002052 "positive
regulation of neuroblast proliferation" evidence=IMP] [GO:0003677
"DNA binding" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0021879 "forebrain neuron differentiation"
evidence=IMP] [GO:0021979 "hypothalamus cell differentiation"
evidence=IMP] [GO:0021985 "neurohypophysis development"
evidence=IMP] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 MGI:MGI:99835 GO:GO:0005634
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689
InterPro:IPR003654 Pfam:PF03826 PROSITE:PS50803
GeneTree:ENSGT00700000104013 GO:GO:0000976 GO:GO:0021879
GO:GO:0002052 eggNOG:NOG256838 HOVERGEN:HBG001617 OrthoDB:EOG4FXR8D
CTD:23440 HOGENOM:HOG000039976 OMA:RWATAGM GO:GO:0021979
GO:GO:0021985 EMBL:Y10413 IPI:IPI00114250 RefSeq:NP_035151.1
UniGene:Mm.42051 ProteinModelPortal:O09113 SMR:O09113 STRING:O09113
PRIDE:O09113 DNASU:18420 Ensembl:ENSMUST00000022195 GeneID:18420
KEGG:mmu:18420 UCSC:uc007rly.1 InParanoid:O09113 NextBio:294068
Bgee:O09113 CleanEx:MM_OTP Genevestigator:O09113
GermOnline:ENSMUSG00000021685 Uniprot:O09113
Length = 325
Score = 139 (54.0 bits), Expect = 3.3e-06, P = 3.3e-06
Identities = 27/74 (36%), Positives = 42/74 (56%)
Query: 78 EGASGDDQEANEDGPPRKKKYH-RHTPHQIQELESFFKECPHPDEKQRSELSRRLGLESK 136
+G Q + G ++K++ R TP Q+ ELE F + +PD R EL+ R+GL
Sbjct: 87 QGGPNPSQAGQQQGQQKQKRHRTRFTPAQLNELERSFAKTHYPDIFMREELALRIGLTES 146
Query: 137 QIKFWFQNRRTQMK 150
+++ WFQNRR + K
Sbjct: 147 RVQVWFQNRRAKWK 160
>UNIPROTKB|G3V7E0 [details] [associations]
symbol:Otp "Protein Otp" species:10116 "Rattus norvegicus"
[GO:0000976 "transcription regulatory region sequence-specific DNA
binding" evidence=IEA] [GO:0002052 "positive regulation of
neuroblast proliferation" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0021879
"forebrain neuron differentiation" evidence=IEA] [GO:0021979
"hypothalamus cell differentiation" evidence=IEA] [GO:0021985
"neurohypophysis development" evidence=IEA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 RGD:727945 GO:GO:0005634 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR003654 Pfam:PF03826
PROSITE:PS50803 GeneTree:ENSGT00700000104013 GO:GO:0000976
EMBL:CH473955 CTD:23440 OMA:RWATAGM RefSeq:NP_001093993.1
UniGene:Rn.7202 ProteinModelPortal:G3V7E0 SMR:G3V7E0 PRIDE:G3V7E0
Ensembl:ENSRNOT00000014036 GeneID:294640 KEGG:rno:294640
NextBio:638354 Uniprot:G3V7E0
Length = 325
Score = 139 (54.0 bits), Expect = 3.3e-06, P = 3.3e-06
Identities = 27/74 (36%), Positives = 42/74 (56%)
Query: 78 EGASGDDQEANEDGPPRKKKYH-RHTPHQIQELESFFKECPHPDEKQRSELSRRLGLESK 136
+G Q + G ++K++ R TP Q+ ELE F + +PD R EL+ R+GL
Sbjct: 87 QGGPNPSQAGQQQGQQKQKRHRTRFTPAQLNELERSFAKTHYPDIFMREELALRIGLTES 146
Query: 137 QIKFWFQNRRTQMK 150
+++ WFQNRR + K
Sbjct: 147 RVQVWFQNRRAKWK 160
>UNIPROTKB|F6USR4 [details] [associations]
symbol:MEOX2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0001525 "angiogenesis" evidence=IEA] [GO:0001757 "somite
specification" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0007519 "skeletal muscle tissue development" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0060021 "palate development" evidence=IEA] [GO:0060173 "limb
development" evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0005737 GO:GO:0043565
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 EMBL:AADN02000860 EMBL:AADN02000861
EMBL:AADN02000862 EMBL:AADN02000863 EMBL:AADN02000864
IPI:IPI00821029 ProteinModelPortal:F6USR4
Ensembl:ENSGALT00000037944 ArrayExpress:F6USR4 Uniprot:F6USR4
Length = 154
Score = 119 (46.9 bits), Expect = 3.4e-06, P = 3.4e-06
Identities = 33/88 (37%), Positives = 46/88 (52%)
Query: 67 EFESRSGSDNVEGASGDDQEANE----DGPPRKKKYHRHTPHQIQELESFFKECPHPDEK 122
E E RSG + S D QE N + PRK++ T QI+ELE+ F +
Sbjct: 9 ETEKRSGKRKSD--SSDSQEGNYKSEVNSKPRKERT-AFTKEQIRELEAEFAHHNYLTRL 65
Query: 123 QRSELSRRLGLESKQIKFWFQNRRTQMK 150
+R E++ L L +Q+K WFQNRR + K
Sbjct: 66 RRYEIAVNLDLTERQVKVWFQNRRMKWK 93
>RGD|1595784 [details] [associations]
symbol:Hoxc9 "homeobox C9" species:10116 "Rattus norvegicus"
[GO:0000976 "transcription regulatory region sequence-specific DNA
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0009952 "anterior/posterior pattern
specification" evidence=IEA;ISO] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0048704 "embryonic skeletal system
morphogenesis" evidence=IEA;ISO] [GO:0048706 "embryonic skeletal
system development" evidence=ISO] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 RGD:1595784 GO:GO:0007275
GO:GO:0005634 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0000976
eggNOG:NOG314669 EMBL:S76301 EMBL:M37568 IPI:IPI01016344 PIR:D43559
UniGene:Rn.91646 ProteinModelPortal:P18866 SMR:P18866 STRING:P18866
UCSC:RGD:1595784 HOVERGEN:HBG107057 Genevestigator:P18866
Uniprot:P18866
Length = 108
Score = 119 (46.9 bits), Expect = 3.4e-06, P = 3.4e-06
Identities = 30/83 (36%), Positives = 45/83 (54%)
Query: 92 PPRKKKYHRHTPHQIQELESFFKECPHPDEKQRSELSRRLGLESKQIKFWFQNRRTQMKT 151
P R+ ++ +Q ELE F P+ K+R E+S LGL +Q+K WFQNRR + K
Sbjct: 13 PGRRSGRQTYSRYQTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWKK 72
Query: 152 QMERHENIILRQEHDKLRAE-NE 173
+ + + R E +K+ E NE
Sbjct: 73 ENNKDKLPGARDE-EKVEEEGNE 94
>UNIPROTKB|P18866 [details] [associations]
symbol:Hoxc8 "Homeobox protein Hox-C8" species:10116
"Rattus norvegicus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
RGD:1595784 GO:GO:0007275 GO:GO:0005634 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0000976 eggNOG:NOG314669 EMBL:S76301 EMBL:M37568
IPI:IPI01016344 PIR:D43559 UniGene:Rn.91646
ProteinModelPortal:P18866 SMR:P18866 STRING:P18866 UCSC:RGD:1595784
HOVERGEN:HBG107057 Genevestigator:P18866 Uniprot:P18866
Length = 108
Score = 119 (46.9 bits), Expect = 3.4e-06, P = 3.4e-06
Identities = 30/83 (36%), Positives = 45/83 (54%)
Query: 92 PPRKKKYHRHTPHQIQELESFFKECPHPDEKQRSELSRRLGLESKQIKFWFQNRRTQMKT 151
P R+ ++ +Q ELE F P+ K+R E+S LGL +Q+K WFQNRR + K
Sbjct: 13 PGRRSGRQTYSRYQTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWKK 72
Query: 152 QMERHENIILRQEHDKLRAE-NE 173
+ + + R E +K+ E NE
Sbjct: 73 ENNKDKLPGARDE-EKVEEEGNE 94
>ZFIN|ZDB-GENE-040426-1457 [details] [associations]
symbol:shox2 "short stature homeobox 2"
species:7955 "Danio rerio" [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0000976 "transcription
regulatory region sequence-specific DNA binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0007507 "heart
development" evidence=IMP] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
ZFIN:ZDB-GENE-040426-1457 GO:GO:0005634 GO:GO:0007507 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 HOGENOM:HOG000231518
InterPro:IPR003654 Pfam:PF03826 PROSITE:PS50803 GO:GO:0000976
GeneTree:ENSGT00700000104279 HSSP:P06601 CTD:6474 eggNOG:NOG113578
HOVERGEN:HBG007233 KO:K09331 OrthoDB:EOG41C6X2 EMBL:BX004974
EMBL:BC056324 EMBL:BC065345 IPI:IPI00491363 RefSeq:NP_957490.1
UniGene:Dr.26980 SMR:Q7SZN8 Ensembl:ENSDART00000009564
GeneID:394171 KEGG:dre:394171 InParanoid:Q7SZN8 NextBio:20815116
Uniprot:Q7SZN8
Length = 299
Score = 138 (53.6 bits), Expect = 3.5e-06, P = 3.5e-06
Identities = 58/225 (25%), Positives = 100/225 (44%)
Query: 2 SFGSNSVGMGSRVVAEIFPHCHSMASGAIAQFPLSLSIK-NAMDAGEMGLIGEQFDPSVV 60
+F S S + E+ + + +G++ SLS N + + G + P
Sbjct: 6 AFVSKSFDQKVKEKKEVITYREVLETGSVRNRE-SLSADPNREEISSITRSGVRSSPVRE 64
Query: 61 GRIREEEFESRSGSDNVEGASGDDQEANEDGPP------RKKKYHRH----TPHQIQELE 110
+ E S S + + D +E ED P K K R T Q+ ELE
Sbjct: 65 ADMLASERSRDSSSPKLTDGNTDMKERKEDCKPLEDETQTKIKQRRSRTNFTLEQLNELE 124
Query: 111 SFFKECPHPDEKQRSELSRRLGLESKQIKFWFQNRRTQMKTQMER-HENIIL--RQEHDK 167
F E +PD R ELS+RLGL +++ WFQNRR + + Q + H+ +++ + +
Sbjct: 125 RLFDETHYPDAFMREELSQRLGLSEARVQVWFQNRRAKCRKQENQLHKGVLIGAASQFEA 184
Query: 168 LRAENEMLKDAMKNP--TCNNCGGPAVPGSVSNYELQ-QLRIENA 209
R + A++ P ++C P P S +++Q QL++++A
Sbjct: 185 CRVAPYVNVGALRMPFQQDSHCNVP--PFS---FQVQAQLQLDSA 224
>UNIPROTKB|E2QZN5 [details] [associations]
symbol:SHOX2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 InterPro:IPR003654 Pfam:PF03826 PROSITE:PS50803
GO:GO:0000976 Ensembl:ENSCAFT00000014128 Uniprot:E2QZN5
Length = 334
Score = 139 (54.0 bits), Expect = 3.6e-06, P = 3.6e-06
Identities = 30/85 (35%), Positives = 47/85 (55%)
Query: 78 EGASGDDQEANEDGPPRKKKYHRHTPHQIQELESFFKECPHPDEKQRSELSRRLGLESKQ 137
E A G + E R+ + + T Q+ ELE F E +PD R ELS+RLGL +
Sbjct: 128 EDAKGMEDEGQTKIKQRRSRTN-FTLEQLNELERLFDETHYPDAFMREELSQRLGLSEAR 186
Query: 138 IKFWFQNRRTQMKTQMER-HENIIL 161
++ WFQNRR + + Q + H+ +++
Sbjct: 187 VQVWFQNRRAKCRKQENQLHKGVLI 211
>WB|WBGene00044330 [details] [associations]
symbol:alr-1 species:6239 "Caenorhabditis elegans"
[GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 eggNOG:NOG313402 KO:K09452
GeneTree:ENSGT00700000104279 HSSP:P06601 EMBL:Z68008 PIR:T24046
RefSeq:NP_509860.1 ProteinModelPortal:Q21836 SMR:Q21836
STRING:Q21836 EnsemblMetazoa:R08B4.2 GeneID:181302
KEGG:cel:CELE_R08B4.2 UCSC:R08B4.2 CTD:181302 WormBase:R08B4.2
HOGENOM:HOG000021099 InParanoid:Q21836 OMA:ERSSTHH NextBio:913362
Uniprot:Q21836
Length = 362
Score = 139 (54.0 bits), Expect = 4.2e-06, P = 4.2e-06
Identities = 53/202 (26%), Positives = 87/202 (43%)
Query: 69 ESRSGSDNVE-GASGDDQEANEDGPPRKKKYHRHT--PHQIQELESFFKECPHPDEKQRS 125
E+ S DN E G+ D + +D RK++ +R T Q+ ELE F +PD R
Sbjct: 89 EAASVLDNRENGSPSDGTNSPDDNGKRKQRRYRTTFSAFQLDELEKVFARTHYPDVFTRE 148
Query: 126 ELSRRLGLESKQIKFWFQNRRTQMKTQMERHENIILRQEHDKLRAENEMLKDAMKNPTCN 185
EL+ R+ L +++ WFQNRR + + Q ER H +A + NP
Sbjct: 149 ELATRVQLTEARVQVWFQNRRAKYRKQ-ERSST------HHPYQAPMSIPNSNGDNPYQM 201
Query: 186 NCGGPAVPGSVSNYELQQLRIENARLKDELGRICILANKFLGRPLTSSAGPISPQGVNSS 245
A+ +++ L E R+ R ++ P+T+S+ PI P V +
Sbjct: 202 MLSQEAIFAAINQQAAAHLLNEQVRIATSDRR-----SQSPSVPVTTSS-PILPTSVTPT 255
Query: 246 LELGVGRNG-FGGVANIPGSMM 266
+ N FGG+ + ++
Sbjct: 256 FQNADALNMLFGGITPVTQQLL 277
>UNIPROTKB|G1K364 [details] [associations]
symbol:LOC100858967 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0001656
"metanephros development" evidence=IEA] [GO:0001658 "branching
involved in ureteric bud morphogenesis" evidence=IEA] [GO:0001759
"organ induction" evidence=IEA] [GO:0005667 "transcription factor
complex" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0007501 "mesodermal cell
fate specification" evidence=IEA] [GO:0009952 "anterior/posterior
pattern specification" evidence=IEA] [GO:0009953 "dorsal/ventral
pattern formation" evidence=IEA] [GO:0009954 "proximal/distal
pattern formation" evidence=IEA] [GO:0010720 "positive regulation
of cell development" evidence=IEA] [GO:0032332 "positive regulation
of chondrocyte differentiation" evidence=IEA] [GO:0032993
"protein-DNA complex" evidence=IEA] [GO:0042733 "embryonic digit
morphogenesis" evidence=IEA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0048589
"developmental growth" evidence=IEA] [GO:0060272 "embryonic
skeletal joint morphogenesis" evidence=IEA] [GO:0060351 "cartilage
development involved in endochondral bone morphogenesis"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
UniGene:Gga.957 OMA:GGCRETA NextBio:20815412 InterPro:IPR021918
Pfam:PF12045 GeneTree:ENSGT00700000104263 EMBL:AADN02000990
EMBL:AADN02000991 EMBL:AADN02000992 EMBL:AADN02000993
Ensembl:ENSGALT00000037819 Uniprot:G1K364
Length = 296
Score = 137 (53.3 bits), Expect = 4.4e-06, P = 4.4e-06
Identities = 33/89 (37%), Positives = 53/89 (59%)
Query: 64 REEEFESRSGSDNVEGASGDDQE--ANEDGPPRKKKYHRHTPHQIQELESFFKECPHPDE 121
+E SGS + E +SG+++E + G +KK +T +QI+ELE F + ++
Sbjct: 193 KERRRRPESGS-SPESSSGNNEEKSGSSSGQRTRKKRCPYTKYQIRELEREFFFSVYINK 251
Query: 122 KQRSELSRRLGLESKQIKFWFQNRRTQMK 150
++R +LSR L L +Q+K WFQNRR + K
Sbjct: 252 EKRLQLSRMLNLTDRQVKIWFQNRRMKEK 280
>UNIPROTKB|P31258 [details] [associations]
symbol:HOXA11 "Homeobox protein Hox-A11" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0001656
"metanephros development" evidence=IEA] [GO:0001658 "branching
involved in ureteric bud morphogenesis" evidence=IEA] [GO:0001759
"organ induction" evidence=IEA] [GO:0005667 "transcription factor
complex" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0007501 "mesodermal cell
fate specification" evidence=IEA] [GO:0009952 "anterior/posterior
pattern specification" evidence=IEA] [GO:0009953 "dorsal/ventral
pattern formation" evidence=IEA] [GO:0009954 "proximal/distal
pattern formation" evidence=IEA] [GO:0010720 "positive regulation
of cell development" evidence=IEA] [GO:0032332 "positive regulation
of chondrocyte differentiation" evidence=IEA] [GO:0032993
"protein-DNA complex" evidence=IEA] [GO:0042733 "embryonic digit
morphogenesis" evidence=IEA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0048589
"developmental growth" evidence=IEA] [GO:0060272 "embryonic
skeletal joint morphogenesis" evidence=IEA] [GO:0060351 "cartilage
development involved in endochondral bone morphogenesis"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0007275 GO:GO:0005737 GO:GO:0045893
GO:GO:0005730 GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0005667 GO:GO:0032332 GO:GO:0048589 GO:GO:0032993
GO:GO:0001759 EMBL:M81250 IPI:IPI00585648 RefSeq:NP_989950.1
RefSeq:XP_003640756.1 RefSeq:XP_003640763.1 UniGene:Gga.957
ProteinModelPortal:P31258 SMR:P31258 STRING:P31258 GeneID:100858967
GeneID:100859078 GeneID:395327 KEGG:gga:100858967
KEGG:gga:100859078 KEGG:gga:395327 CTD:3207 eggNOG:NOG274734
HOGENOM:HOG000231898 HOVERGEN:HBG052048 InParanoid:P31258 KO:K09296
OMA:GGCRETA NextBio:20815412 ArrayExpress:P31258 GO:GO:0010720
InterPro:IPR021918 Pfam:PF12045 Uniprot:P31258
Length = 297
Score = 137 (53.3 bits), Expect = 4.5e-06, P = 4.5e-06
Identities = 33/89 (37%), Positives = 53/89 (59%)
Query: 64 REEEFESRSGSDNVEGASGDDQE--ANEDGPPRKKKYHRHTPHQIQELESFFKECPHPDE 121
+E SGS + E +SG+++E + G +KK +T +QI+ELE F + ++
Sbjct: 194 KERRRRPESGS-SPESSSGNNEEKSGSSSGQRTRKKRCPYTKYQIRELEREFFFSVYINK 252
Query: 122 KQRSELSRRLGLESKQIKFWFQNRRTQMK 150
++R +LSR L L +Q+K WFQNRR + K
Sbjct: 253 EKRLQLSRMLNLTDRQVKIWFQNRRMKEK 281
>UNIPROTKB|H0YIA6 [details] [associations]
symbol:HOXA11 "Homeobox protein Hox-A11" species:9606 "Homo
sapiens" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005737 GO:GO:0005730
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 EMBL:AC004080 InterPro:IPR021918
Pfam:PF12045 HGNC:HGNC:5101 ChiTaRS:HOXA11 Ensembl:ENST00000517402
Uniprot:H0YIA6
Length = 283
Score = 136 (52.9 bits), Expect = 5.0e-06, P = 5.0e-06
Identities = 41/135 (30%), Positives = 65/135 (48%)
Query: 16 AEIFPHCHSMASGAIAQFPLSLSIKNAMDAGEMGLIGEQFDPSVVGRIREEEFESRSGSD 75
AE P + S A A ++ D+G G E + + R ES S +
Sbjct: 135 AEKGPPAATATSAAAAAAATGAPATSSSDSGGGGGCRETA-AAAEEKERRRRPESSSSPE 193
Query: 76 NVEGASGDDQEANEDGPPRKKKYHRHTPHQIQELESFFKECPHPDEKQRSELSRRLGLES 135
+ G + +D+ G +KK +T +QI+ELE F + ++++R +LSR L L
Sbjct: 194 SSSGHT-EDKAGGSSGQRTRKKRCPYTKYQIRELEREFFFSVYINKEKRLQLSRMLNLTD 252
Query: 136 KQIKFWFQNRRTQMK 150
+Q+K WFQNRR + K
Sbjct: 253 RQVKIWFQNRRMKEK 267
>TAIR|locus:2171489 [details] [associations]
symbol:HAT2 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;IEA;ISS]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0009733 "response to auxin stimulus"
evidence=RCA;IMP] [GO:0009734 "auxin mediated signaling pathway"
evidence=IEP] [GO:0009826 "unidimensional cell growth"
evidence=IMP] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IMP] [GO:0009641 "shade avoidance"
evidence=IEP] InterPro:IPR001356 InterPro:IPR003106
InterPro:IPR006712 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 Pfam:PF02183 Pfam:PF04618 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00340 SMART:SM00389 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0045892 GO:GO:0009734
GO:GO:0003677 GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009826 KO:K09338
HOGENOM:HOG000241612 GO:GO:0009641 EMBL:AB018117
ProtClustDB:CLSN2685891 EMBL:AB067629 EMBL:AJ431183 EMBL:AF428450
EMBL:AY052324 EMBL:AY061904 EMBL:U09335 IPI:IPI00526064 PIR:T52368
RefSeq:NP_199548.1 UniGene:At.25127 ProteinModelPortal:P46601
SMR:P46601 IntAct:P46601 STRING:P46601 EnsemblPlants:AT5G47370.1
GeneID:834784 KEGG:ath:AT5G47370 GeneFarm:3986 TAIR:At5g47370
eggNOG:NOG256142 InParanoid:P46601 OMA:IPINPWA PhylomeDB:P46601
Genevestigator:P46601 GermOnline:AT5G47370 Uniprot:P46601
Length = 283
Score = 136 (52.9 bits), Expect = 5.0e-06, P = 5.0e-06
Identities = 39/115 (33%), Positives = 60/115 (52%)
Query: 72 SGSDNVE-----GASGDDQEANEDGPPRKKKYHRHTPHQIQELESFFKECPHPDEKQRSE 126
SG D+ E G S + EDG +K R + Q LE FKE + KQ+
Sbjct: 100 SGDDHDEITPDRGYSRGTSDEEEDGGETSRKKLRLSKDQSAFLEETFKEHNTLNPKQKLA 159
Query: 127 LSRRLGLESKQIKFWFQNRRTQMKTQMERHENIILRQEHDKLRAENEML-KDAMK 180
L+++L L ++Q++ WFQNRR + K + + L++ +KL EN L K+AM+
Sbjct: 160 LAKKLNLTARQVEVWFQNRRARTKLKQTEVDCEYLKRCVEKLTEENRRLQKEAME 214
>ZFIN|ZDB-GENE-000823-8 [details] [associations]
symbol:hoxa11a "homeo box A11a" species:7955 "Danio
rerio" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0007275 "multicellular
organismal development" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
Pfam:PF00046 PROSITE:PS50071 SMART:SM00389 ZFIN:ZDB-GENE-000823-8
GO:GO:0007275 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 eggNOG:NOG286554 HOGENOM:HOG000231898
HOVERGEN:HBG052048 InterPro:IPR021918 Pfam:PF12045
OrthoDB:EOG4KKZ3X EMBL:CR382300 EMBL:AF071240 EMBL:AF287138
IPI:IPI00484931 RefSeq:NP_571619.1 UniGene:Dr.85394
ProteinModelPortal:Q9DDU0 SMR:Q9DDU0 GeneID:58061 KEGG:dre:58061
CTD:58061 NextBio:20892323 ArrayExpress:Q9DDU0 Uniprot:Q9DDU0
Length = 284
Score = 136 (52.9 bits), Expect = 5.1e-06, P = 5.1e-06
Identities = 32/90 (35%), Positives = 53/90 (58%)
Query: 64 REEEFESRSGSDNVEGASGDDQEANE---DGPPRKKKYHRHTPHQIQELESFFKECPHPD 120
++ E + R + + E +SG+++E GP +KK +T QI+ELE F + +
Sbjct: 179 QQPEGKERPETSSPESSSGNNEEKTSGANSGPRFRKKRCPYTKFQIRELEREFFFSVYIN 238
Query: 121 EKQRSELSRRLGLESKQIKFWFQNRRTQMK 150
+++R +LSR L L +Q+K WFQNRR + K
Sbjct: 239 KEKRLQLSRMLNLTDRQVKMWFQNRRMKEK 268
>UNIPROTKB|E1BNP2 [details] [associations]
symbol:HOXA11 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005667 "transcription factor complex" evidence=ISS]
[GO:0060351 "cartilage development involved in endochondral bone
morphogenesis" evidence=ISS] [GO:0048589 "developmental growth"
evidence=ISS] [GO:0032332 "positive regulation of chondrocyte
differentiation" evidence=ISS] [GO:0030326 "embryonic limb
morphogenesis" evidence=ISS] [GO:0010720 "positive regulation of
cell development" evidence=ISS] [GO:0009953 "dorsal/ventral pattern
formation" evidence=ISS] [GO:0007275 "multicellular organismal
development" evidence=ISS] [GO:0001658 "branching involved in
ureteric bud morphogenesis" evidence=ISS] [GO:0001501 "skeletal
system development" evidence=ISS] [GO:0043234 "protein complex"
evidence=ISS] [GO:0032993 "protein-DNA complex" evidence=ISS]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0007501 "mesodermal cell fate specification"
evidence=ISS] [GO:0060272 "embryonic skeletal joint morphogenesis"
evidence=IEA] [GO:0042733 "embryonic digit morphogenesis"
evidence=IEA] [GO:0009954 "proximal/distal pattern formation"
evidence=IEA] [GO:0009952 "anterior/posterior pattern
specification" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0001759 "organ induction"
evidence=IEA] [GO:0001656 "metanephros development" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005737 GO:GO:0045893 GO:GO:0005730
GO:GO:0009952 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0005667
GO:GO:0007501 GO:GO:0030326 GO:GO:0032332 GO:GO:0048589
GO:GO:0009953 GO:GO:0009954 GO:GO:0042733 GO:GO:0001658
GO:GO:0001656 GO:GO:0032993 GO:GO:0001759 GO:GO:0060351 OMA:GGCRETA
GO:GO:0010720 InterPro:IPR021918 Pfam:PF12045
GeneTree:ENSGT00700000104263 EMBL:DAAA02010937 IPI:IPI00715888
Ensembl:ENSBTAT00000019611 Uniprot:E1BNP2
Length = 315
Score = 137 (53.3 bits), Expect = 5.2e-06, P = 5.2e-06
Identities = 48/158 (30%), Positives = 70/158 (44%)
Query: 3 FGSNSVGMGSRVVAEIFPHCHSMASGAIAQFPLSLSIKNAMDAGEMGLIGEQFDPSVVGR 62
F + G + + +P S G A S + A A G S G
Sbjct: 143 FFETAYGTPENLASSDYPGDKSAEKGPPAAAATSAAAAAAA-AAATGTPATSSSDSGAGG 201
Query: 63 IRE-----EEFESR---SGSDNVEGASG--DDQEANEDGPPRKKKYHRHTPHQIQELESF 112
RE EE E R S + E +SG +D+ G +KK +T +QI+ELE
Sbjct: 202 CREAAAAAEEKERRRRPESSSSPESSSGHTEDKAGGSSGQRTRKKRCPYTKYQIRELERE 261
Query: 113 FKECPHPDEKQRSELSRRLGLESKQIKFWFQNRRTQMK 150
F + ++++R +LSR L L +Q+K WFQNRR + K
Sbjct: 262 FFFSVYINKEKRLQLSRMLNLTDRQVKIWFQNRRMKEK 299
>MGI|MGI:1890816 [details] [associations]
symbol:Vsx1 "visual system homeobox 1 homolog (zebrafish)"
species:10090 "Mus musculus" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0007601 "visual perception"
evidence=IMP] [GO:0042551 "neuron maturation" evidence=IGI]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0048666 "neuron development" evidence=IMP] [GO:0050896
"response to stimulus" evidence=IEA] [GO:0060040 "retinal bipolar
neuron differentiation" evidence=IGI;IMP] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 MGI:MGI:1890816 GO:GO:0005634
GO:GO:0007601 GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
GO:GO:0050896 Gene3D:1.10.10.60 SUPFAM:SSF46689
GeneTree:ENSGT00700000104013 GO:GO:0060040 GO:GO:0042551
eggNOG:NOG237888 HOGENOM:HOG000115909 InterPro:IPR023339
PROSITE:PS51496 CTD:30813 HOVERGEN:HBG036251 KO:K09335 OMA:WGSDHLK
OrthoDB:EOG4907B0 EMBL:AY056825 EMBL:AF395732 EMBL:AF391757
EMBL:AF391758 EMBL:BC057647 IPI:IPI00125937 PIR:JC7750
RefSeq:NP_473409.1 UniGene:Mm.207061 ProteinModelPortal:Q91V10
SMR:Q91V10 STRING:Q91V10 PhosphoSite:Q91V10 PRIDE:Q91V10
Ensembl:ENSMUST00000046095 GeneID:114889 KEGG:mmu:114889
InParanoid:Q91V10 NextBio:368909 Bgee:Q91V10 CleanEx:MM_VSX1
Genevestigator:Q91V10 GermOnline:ENSMUSG00000033080 Uniprot:Q91V10
Length = 363
Score = 138 (53.6 bits), Expect = 5.5e-06, P = 5.5e-06
Identities = 42/136 (30%), Positives = 64/136 (47%)
Query: 24 SMASGAIAQFPLSLSIKNAMDAGEMGLI--GEQFDPSVVGRIREEEFESRSGSDNVEGAS 81
S A+ A A+ L ++ AG + G P +G + E S S D+
Sbjct: 98 SAAAAARARCLLLADLRLLPSAGPEPAVAQGPVHPPPALGSQQRSESVSTSDGDSPSEEK 157
Query: 82 GDDQEANEDGPPRKKKYHR--HTPHQIQELESFFKECPHPDEKQRSELSRRLGLESKQIK 139
D + + G RKK+ HR T HQ++ELE F E +PD R L+ + L +I+
Sbjct: 158 NDPKMSLILGK-RKKRRHRTVFTAHQLEELEKAFGEAHYPDVYAREMLAAKTELPEDRIQ 216
Query: 140 FWFQNRRTQMKTQMER 155
WFQNRR + + + +R
Sbjct: 217 VWFQNRRAKWRKREKR 232
>UNIPROTKB|D6RAR5 [details] [associations]
symbol:D6RAR5 "Uncharacterized protein" species:9606 "Homo
sapiens" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 EMBL:AC004080
HOGENOM:HOG000294138 IPI:IPI00382764 ProteinModelPortal:D6RAR5
SMR:D6RAR5 Ensembl:ENST00000470747 Uniprot:D6RAR5
Length = 112
Score = 117 (46.2 bits), Expect = 5.5e-06, P = 5.5e-06
Identities = 34/101 (33%), Positives = 48/101 (47%)
Query: 51 IGEQFDPSVVGRIREEEFESRSGSDNVEGASGDDQEANE-DGPPRKKKYHRHTPHQIQEL 109
+ + PS G E E+ SG D ++ AN +KK +T HQ EL
Sbjct: 4 VDREKQPSE-GAFSENNAENESGGDKPP-IDPNNPAANWLHARSTRKKRCPYTKHQTLEL 61
Query: 110 ESFFKECPHPDEKQRSELSRRLGLESKQIKFWFQNRRTQMK 150
E F + +R E++R L L +Q+K WFQNRR +MK
Sbjct: 62 EKEFLFNMYLTRDRRYEVARLLNLTERQVKIWFQNRRMKMK 102
>UNIPROTKB|D6RBG8 [details] [associations]
symbol:PITX2 "Pituitary homeobox 2" species:9606 "Homo
sapiens" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
HOGENOM:HOG000231518 EMBL:AC017068 HGNC:HGNC:9005 ChiTaRS:PITX2
IPI:IPI00967695 ProteinModelPortal:D6RBG8 SMR:D6RBG8
Ensembl:ENST00000511990 ArrayExpress:D6RBG8 Bgee:D6RBG8
Uniprot:D6RBG8
Length = 118
Score = 117 (46.2 bits), Expect = 5.5e-06, P = 5.5e-06
Identities = 24/80 (30%), Positives = 45/80 (56%)
Query: 82 GDDQEANEDGPPRKKKYHRHTPH----QIQELESFFKECPHPDEKQRSELSRRLGLESKQ 137
G +++ + P +KK+ R H Q+QELE+ F+ +PD R E++ L +
Sbjct: 23 GKNEDVGAEDPSKKKRQRRQRTHFTSQQLQELEATFQRNRYPDMSTREEIAVWTNLTEAR 82
Query: 138 IKFWFQNRRTQMKTQMERHE 157
++ WF+NRR + + + ER++
Sbjct: 83 VRVWFKNRRAKWRKR-ERNQ 101
>TAIR|locus:2084228 [details] [associations]
symbol:HB-1 "homeobox 1" species:3702 "Arabidopsis
thaliana" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=ISM;IEA;ISS] [GO:0006355 "regulation
of transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA;IDA] [GO:0009637
"response to blue light" evidence=IEP] [GO:0009651 "response to
salt stress" evidence=IEP] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IDA] [GO:0010167 "response
to nitrate" evidence=RCA] [GO:0015706 "nitrate transport"
evidence=RCA] [GO:0015996 "chlorophyll catabolic process"
evidence=RCA] [GO:0042803 "protein homodimerization activity"
evidence=IDA] [GO:0009965 "leaf morphogenesis" evidence=IMP]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR003106
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 Pfam:PF02183
PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0045893
GO:GO:0042803 GO:GO:0009651 GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 GO:GO:0009637 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0009965 EMBL:AC009325 GO:GO:0000976 KO:K09338
HOGENOM:HOG000006025 EMBL:X58821 EMBL:AY058188 EMBL:AY098972
EMBL:M90416 IPI:IPI00536407 PIR:S16325 RefSeq:NP_186796.1
UniGene:At.41275 UniGene:At.47815 ProteinModelPortal:Q02283
SMR:Q02283 STRING:Q02283 EnsemblPlants:AT3G01470.1 GeneID:821138
KEGG:ath:AT3G01470 GeneFarm:3968 TAIR:At3g01470 eggNOG:NOG245596
InParanoid:Q02283 OMA:QVHLLEK PhylomeDB:Q02283
ProtClustDB:CLSN2684999 Genevestigator:Q02283 GermOnline:AT3G01470
Uniprot:Q02283
Length = 272
Score = 135 (52.6 bits), Expect = 5.9e-06, P = 5.9e-06
Identities = 41/143 (28%), Positives = 73/143 (51%)
Query: 84 DQEANEDGPPRKKKYHRHTPHQIQELESFFKECPHPDEKQRSELSRRLGLESKQIKFWFQ 143
D + +D P KK+ R T Q+ LE F+ + +++++L+++LGL+ +Q+ WFQ
Sbjct: 57 DDDFYDDQLPEKKR--RLTTEQVHLLEKSFETENKLEPERKTQLAKKLGLQPRQVAVWFQ 114
Query: 144 NRRTQMKT-QMERHENII------LRQEHDKLRAENEMLKDAMKNPTCNNCGGPAV---- 192
NRR + KT Q+ER +++ L +D + +N+ L+ + + T G
Sbjct: 115 NRRARWKTKQLERDYDLLKSTYDQLLSNYDSIVMDNDKLRSEVTSLTEKLQGKQETANEP 174
Query: 193 PGSVSN-YELQQLRIENARLKDE 214
PG V +L + I A +K E
Sbjct: 175 PGQVPEPNQLDPVYINAAAIKTE 197
>UNIPROTKB|F1NZJ4 [details] [associations]
symbol:HOXD8 "Homeobox protein Hox-D8" species:9031 "Gallus
gallus" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
GO:GO:0007275 GO:GO:0005634 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0000976
GeneTree:ENSGT00700000104054 EMBL:AADN02020025 EMBL:AADN02020026
EMBL:AADN02020027 EMBL:AADN02020028 EMBL:AADN02020029
EMBL:AADN02020030 IPI:IPI00818317 Ensembl:ENSGALT00000038689
ArrayExpress:F1NZJ4 Uniprot:F1NZJ4
Length = 168
Score = 121 (47.7 bits), Expect = 6.2e-06, P = 6.2e-06
Identities = 28/82 (34%), Positives = 44/82 (53%)
Query: 92 PPRKKKYHRHTPHQIQELESFFKECPHPDEKQRSELSRRLGLESKQIKFWFQNRRTQMKT 151
P R++ ++ Q ELE F P+ K+R E+S LGL +Q+K WFQNRR + K
Sbjct: 73 PGRRRGRQTYSRFQTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWKK 132
Query: 152 QMERHENIILRQEHDKLRAENE 173
+ + + +QE + A+ E
Sbjct: 133 ENNKDKFPASKQEGKEGEAKKE 154
>UNIPROTKB|P31270 [details] [associations]
symbol:HOXA11 "Homeobox protein Hox-A11" species:9606 "Homo
sapiens" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0001656 "metanephros development" evidence=IEA]
[GO:0001759 "organ induction" evidence=IEA] [GO:0009952
"anterior/posterior pattern specification" evidence=IEA]
[GO:0009954 "proximal/distal pattern formation" evidence=IEA]
[GO:0042733 "embryonic digit morphogenesis" evidence=IEA]
[GO:0060272 "embryonic skeletal joint morphogenesis" evidence=IEA]
[GO:0007501 "mesodermal cell fate specification" evidence=ISS]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0032993 "protein-DNA complex" evidence=ISS]
[GO:0043234 "protein complex" evidence=ISS] [GO:0001501 "skeletal
system development" evidence=ISS] [GO:0001658 "branching involved
in ureteric bud morphogenesis" evidence=ISS] [GO:0007275
"multicellular organismal development" evidence=ISS] [GO:0009953
"dorsal/ventral pattern formation" evidence=ISS] [GO:0010720
"positive regulation of cell development" evidence=ISS] [GO:0030326
"embryonic limb morphogenesis" evidence=ISS] [GO:0032332 "positive
regulation of chondrocyte differentiation" evidence=ISS]
[GO:0048589 "developmental growth" evidence=ISS] [GO:0060351
"cartilage development involved in endochondral bone morphogenesis"
evidence=ISS] [GO:0005667 "transcription factor complex"
evidence=ISS] [GO:0009653 "anatomical structure morphogenesis"
evidence=TAS] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005737 GO:GO:0045893 GO:GO:0005730
GO:GO:0009952 EMBL:CH471073 GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 EMBL:CH236948 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0005667 GO:GO:0007501
GO:GO:0030326 GO:GO:0032332 GO:GO:0048589 GO:GO:0009953
GO:GO:0009954 GO:GO:0042733 GO:GO:0001658 GO:GO:0001656
GO:GO:0032993 GO:GO:0001759 GO:GO:0060351 EMBL:AC004080 CTD:3207
eggNOG:NOG274734 HOGENOM:HOG000231898 HOVERGEN:HBG052048 KO:K09296
OMA:GGCRETA GO:GO:0010720 InterPro:IPR021918 Pfam:PF12045
EMBL:AF071164 EMBL:AF039307 EMBL:BC040948 IPI:IPI00010754
PIR:S14931 RefSeq:NP_005514.1 UniGene:Hs.249171
ProteinModelPortal:P31270 SMR:P31270 IntAct:P31270 STRING:P31270
PhosphoSite:P31270 DMDM:13124744 PRIDE:P31270 DNASU:3207
Ensembl:ENST00000006015 GeneID:3207 KEGG:hsa:3207 UCSC:uc003syx.3
GeneCards:GC07M027220 HGNC:HGNC:5101 HPA:HPA035623 MIM:142958
MIM:605432 neXtProt:NX_P31270 Orphanet:71289 PharmGKB:PA29378
InParanoid:P31270 OrthoDB:EOG4KKZ3X PhylomeDB:P31270 ChiTaRS:HOXA11
GenomeRNAi:3207 NextBio:12762 Bgee:P31270 CleanEx:HS_HOXA11
Genevestigator:P31270 GermOnline:ENSG00000005073 Uniprot:P31270
Length = 313
Score = 136 (52.9 bits), Expect = 6.6e-06, P = 6.6e-06
Identities = 41/135 (30%), Positives = 65/135 (48%)
Query: 16 AEIFPHCHSMASGAIAQFPLSLSIKNAMDAGEMGLIGEQFDPSVVGRIREEEFESRSGSD 75
AE P + S A A ++ D+G G E + + R ES S +
Sbjct: 165 AEKGPPAATATSAAAAAAATGAPATSSSDSGGGGGCRETA-AAAEEKERRRRPESSSSPE 223
Query: 76 NVEGASGDDQEANEDGPPRKKKYHRHTPHQIQELESFFKECPHPDEKQRSELSRRLGLES 135
+ G + +D+ G +KK +T +QI+ELE F + ++++R +LSR L L
Sbjct: 224 SSSGHT-EDKAGGSSGQRTRKKRCPYTKYQIRELEREFFFSVYINKEKRLQLSRMLNLTD 282
Query: 136 KQIKFWFQNRRTQMK 150
+Q+K WFQNRR + K
Sbjct: 283 RQVKIWFQNRRMKEK 297
>RGD|1564605 [details] [associations]
symbol:Hoxa11 "homeobox A11" species:10116 "Rattus norvegicus"
[GO:0001501 "skeletal system development" evidence=ISO] [GO:0001656
"metanephros development" evidence=ISO] [GO:0001658 "branching
involved in ureteric bud morphogenesis" evidence=ISO] [GO:0001759
"organ induction" evidence=ISO] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005667 "transcription factor complex"
evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0007275 "multicellular organismal
development" evidence=ISO] [GO:0007501 "mesodermal cell fate
specification" evidence=ISO] [GO:0009952 "anterior/posterior
pattern specification" evidence=ISO] [GO:0009953 "dorsal/ventral
pattern formation" evidence=ISO] [GO:0009954 "proximal/distal
pattern formation" evidence=ISO] [GO:0010720 "positive regulation
of cell development" evidence=ISO] [GO:0030326 "embryonic limb
morphogenesis" evidence=ISO] [GO:0032330 "regulation of chondrocyte
differentiation" evidence=ISO] [GO:0032332 "positive regulation of
chondrocyte differentiation" evidence=ISO] [GO:0032993 "protein-DNA
complex" evidence=ISO] [GO:0035115 "embryonic forelimb
morphogenesis" evidence=ISO] [GO:0042733 "embryonic digit
morphogenesis" evidence=ISO] [GO:0043234 "protein complex"
evidence=ISO] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=ISO] [GO:0048589 "developmental growth"
evidence=ISO] [GO:0060272 "embryonic skeletal joint morphogenesis"
evidence=ISO] [GO:0060351 "cartilage development involved in
endochondral bone morphogenesis" evidence=ISO] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 RGD:1564605 GO:GO:0005634
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 KO:K09295 CTD:3207 KO:K09296
OMA:GGCRETA InterPro:IPR021918 Pfam:PF12045
GeneTree:ENSGT00700000104263 EMBL:CH474011 EMBL:AC122669
RefSeq:NP_001123350.1 RefSeq:XP_003749800.1 RefSeq:XP_003752232.1
RefSeq:XP_003753947.1 UniGene:Rn.224575 Ensembl:ENSRNOT00000010256
GeneID:100909443 GeneID:100911743 GeneID:368057 KEGG:rno:100909443
KEGG:rno:100911743 KEGG:rno:368057 NextBio:691993 Uniprot:G3V6Z0
Length = 313
Score = 136 (52.9 bits), Expect = 6.6e-06, P = 6.6e-06
Identities = 39/131 (29%), Positives = 66/131 (50%)
Query: 20 PHCHSMASGAIAQFPLSLSIKNAMDAGEMGLIGEQFDPSVVGRIREEEFESRSGSDNVEG 79
P + ++ A+A ++ D G G G Q + + + R ES S ++ G
Sbjct: 171 PTAAATSAAAVAAAATGAPATSSSDGGGGG--GCQ-EAAAEEKERRRRPESSSSPESSSG 227
Query: 80 ASGDDQEANEDGPPRKKKYHRHTPHQIQELESFFKECPHPDEKQRSELSRRLGLESKQIK 139
+ +D+ G +KK +T +QI+ELE F + ++++R +LSR L L +Q+K
Sbjct: 228 HT-EDKAGGSGGQRTRKKRCPYTKYQIRELEREFFFSVYINKEKRLQLSRMLNLTDRQVK 286
Query: 140 FWFQNRRTQMK 150
WFQNRR + K
Sbjct: 287 IWFQNRRMKEK 297
>UNIPROTKB|A8MWF9 [details] [associations]
symbol:MEOX1 "Homeobox protein MOX-1" species:9606 "Homo
sapiens" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0001757 "somite specification" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0071837 "HMG box domain
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0043565 GO:GO:0045944 GO:GO:0003700
GO:GO:0003682 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0001757 EMBL:AC068675 EMBL:AC004149
RefSeq:NP_001035091.1 UniGene:Hs.438 DNASU:4222 GeneID:4222
KEGG:hsa:4222 CTD:4222 HGNC:HGNC:7013 PharmGKB:PA30747
HOGENOM:HOG000230987 KO:K09322 GenomeRNAi:4222 NextBio:16659
IPI:IPI00744956 ProteinModelPortal:A8MWF9 SMR:A8MWF9 STRING:A8MWF9
Ensembl:ENST00000393661 HOVERGEN:HBG100054 ArrayExpress:A8MWF9
Bgee:A8MWF9 Uniprot:A8MWF9
Length = 139
Score = 116 (45.9 bits), Expect = 7.1e-06, P = 7.1e-06
Identities = 32/113 (28%), Positives = 51/113 (45%)
Query: 43 MDAGEMGLI----GEQFDPSVVGRIREEEFESRSGSDNVEGASGDDQEANEDGPPRKKKY 98
M +GL+ G D V+G E E +S E + + +G + +K
Sbjct: 1 MGTSSLGLVDTTGGPGDDYGVLGSTANET-EKKSSRRRKESSDNQENRGKPEGSSKARKE 59
Query: 99 HR-HTPHQIQELESFFKECPHPDEKQRSELSRRLGLESKQIKFWFQNRRTQMK 150
T Q++ELE+ F + +R E++ L L +Q+K WFQNRR + K
Sbjct: 60 RTAFTKEQLRELEAEFAHHNYLTRLRRYEIAVNLDLSERQVKVWFQNRRMKWK 112
>RGD|2301305 [details] [associations]
symbol:Rhox3 "reproductive homeobox on X chromosome 3"
species:10116 "Rattus norvegicus" [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0043565 "sequence-specific
DNA binding" evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
Pfam:PF00046 PROSITE:PS50071 SMART:SM00389 RGD:2301305
GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 GeneTree:ENSGT00530000064309 HOGENOM:HOG000230944
HOVERGEN:HBG063782 EMBL:DQ058651 IPI:IPI00679242
RefSeq:NP_001020917.3 RefSeq:NP_001129079.1 UniGene:Rn.18342
Ensembl:ENSRNOT00000041904 GeneID:100190895 GeneID:363439
KEGG:rno:100190895 KEGG:rno:363439 UCSC:RGD:2301305 CTD:100190895
InParanoid:Q4TU79 OrthoDB:EOG4C2HCN NextBio:20795562
Genevestigator:Q4TU79 Uniprot:Q4TU79
Length = 158
Score = 116 (45.9 bits), Expect = 7.1e-06, P = 7.1e-06
Identities = 31/106 (29%), Positives = 50/106 (47%)
Query: 45 AGEMGLIGEQFDPSVVGRIREEEFESRSGSDNVEGASGDDQEANEDGPPRKKKYHRHTPH 104
AG GL+ + G ++ E + E A G ++ PR++ HR T
Sbjct: 48 AGTAGLVDTDVNKEDGGANGGQKNEQQLKEPIPEHAEGKSVQSVPRQVPRRRLRHRFTQW 107
Query: 105 QIQELESFFKECPHPDEKQRSELSRRLGLESKQIKFWFQNRRTQMK 150
Q++ELES FK + R +L+R +G+ +K WF+ RR Q +
Sbjct: 108 QLEELESIFKANCFLSVEARKQLARWMGVTEAIVKRWFRKRREQYR 153
>FB|FBgn0015524 [details] [associations]
symbol:otp "orthopedia" species:7227 "Drosophila
melanogaster" [GO:0003677 "DNA binding" evidence=IDA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISS;NAS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS;NAS] [GO:0007417 "central nervous system development"
evidence=NAS] [GO:0007379 "segment specification" evidence=NAS]
[GO:0000976 "transcription regulatory region sequence-specific DNA
binding" evidence=IEA] [GO:0046331 "lateral inhibition"
evidence=IMP] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 EMBL:AE013599
GO:GO:0007275 GO:GO:0005634 GO:GO:0003677 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0046331 InterPro:IPR003654
PROSITE:PS50803 GeneTree:ENSGT00700000104013 GO:GO:0000976
eggNOG:NOG256838 EMBL:BT023887 EMBL:BT030422 RefSeq:NP_001036563.1
RefSeq:NP_001097388.2 UniGene:Dm.14052 ProteinModelPortal:P56672
SMR:P56672 DIP:DIP-17198N MINT:MINT-743840 STRING:P56672
EnsemblMetazoa:FBtr0290289 GeneID:37364 KEGG:dme:Dmel_CG10036
UCSC:CG10036-RC CTD:23440 FlyBase:FBgn0015524 InParanoid:P56672
OMA:HAGVNSF OrthoDB:EOG4J6Q7G PhylomeDB:P56672 GenomeRNAi:37364
NextBio:803284 Bgee:P56672 GermOnline:CG10036 Uniprot:P56672
Length = 409
Score = 134 (52.2 bits), Expect = 7.2e-06, Sum P(2) = 7.2e-06
Identities = 28/80 (35%), Positives = 44/80 (55%)
Query: 72 SGSDNVEGASGDDQEANEDGPPRKKKYH-RHTPHQIQELESFFKECPHPDEKQRSELSRR 130
SG+ N +G+ N +K++ R TP Q+ ELE F + +PD R E++ R
Sbjct: 86 SGNGNGNNNNGNGNNNNSMQQQDQKRHRTRFTPAQLNELERCFSKTHYPDIFMREEIAMR 145
Query: 131 LGLESKQIKFWFQNRRTQMK 150
+GL +++ WFQNRR + K
Sbjct: 146 IGLTESRVQVWFQNRRAKWK 165
Score = 49 (22.3 bits), Expect = 7.2e-06, Sum P(2) = 7.2e-06
Identities = 22/63 (34%), Positives = 28/63 (44%)
Query: 229 PLTSSAGPISPQGVNSSLELGVGRNGFGGVANIPGSMM-QTSLEFVE-GPV--MSLTMPH 284
PL+SS G+N LG G G+ + SMM Q S+ V GP S T P
Sbjct: 232 PLSSSLNSGLNSGINMGSALGAGSYQHYGLNALGDSMMYQHSVGGVSCGPSGSPSATTPP 291
Query: 285 DRN 287
+ N
Sbjct: 292 NMN 294
>ZFIN|ZDB-GENE-990415-237 [details] [associations]
symbol:rx2 "retinal homeobox gene 2" species:7955
"Danio rerio" [GO:0003677 "DNA binding" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0060219 "camera-type eye photoreceptor cell differentiation"
evidence=IGI] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 ZFIN:ZDB-GENE-990415-237 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689
HOGENOM:HOG000231518 InterPro:IPR003654 Pfam:PF03826
PROSITE:PS50803 eggNOG:NOG261733 GO:GO:0060219 HOVERGEN:HBG021349
OrthoDB:EOG4V4387 KO:K09332 EMBL:AF001908 IPI:IPI00483924
RefSeq:NP_571301.1 UniGene:Dr.75762 ProteinModelPortal:O42357
SMR:O42357 STRING:O42357 GeneID:30473 KEGG:dre:30473 CTD:30473
InParanoid:O42357 NextBio:20806866 ArrayExpress:O42357
Uniprot:O42357
Length = 327
Score = 136 (52.9 bits), Expect = 7.3e-06, P = 7.3e-06
Identities = 31/99 (31%), Positives = 54/99 (54%)
Query: 76 NVEGASGDDQEANEDGPPRKKKYHR--HTPHQIQELESFFKECPHPDEKQRSELSRRLGL 133
NVE S +ED P +K + +R T +Q+ ELE F++ +PD R EL+ ++ L
Sbjct: 115 NVESDSRSPDIPDEDQPKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAMKVNL 174
Query: 134 ESKQIKFWFQNRRTQMKTQMERHENIILRQEHDKLRAEN 172
+++ WFQNRR + + Q E+ + ++ +R+ N
Sbjct: 175 PEVRVQVWFQNRRAKWRRQ-EKMDTGTMKLHDSPIRSFN 212
>WB|WBGene00000452 [details] [associations]
symbol:ceh-31 species:6239 "Caenorhabditis elegans"
[GO:0000976 "transcription regulatory region sequence-specific DNA
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0007275 GO:GO:0005634 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0000976 eggNOG:NOG263484 EMBL:FO080757
GeneTree:ENSGT00700000104454 HOGENOM:HOG000020180 PIR:T25611
RefSeq:NP_508525.3 ProteinModelPortal:Q22910 SMR:Q22910
PaxDb:Q22910 EnsemblMetazoa:C33D12.1 GeneID:191621
KEGG:cel:CELE_C33D12.1 UCSC:C33D12.1 CTD:191621 WormBase:C33D12.1
InParanoid:Q22910 OMA:MELAHRM NextBio:949710 Uniprot:Q22910
Length = 260
Score = 133 (51.9 bits), Expect = 8.5e-06, P = 8.5e-06
Identities = 42/131 (32%), Positives = 60/131 (45%)
Query: 24 SMASGAIAQFPLSLSIKNAMDAGEMGLIGEQFDPSVVGRIREEEFES--RSGSDNVEGAS 81
S + GA S I + +D + DPS I E S R GS N E +
Sbjct: 26 SSSGGAKINLNSSFRISDLLDPTSHST--NEPDPSPTS-INSSESPSSPRIGSPNTERSV 82
Query: 82 GDDQEANEDGPPRKKKYHRHTPHQIQELESFFKECPHPDEKQRSELSRRLGLESKQIKFW 141
+ RK + T Q+QELE+ F++ + + R EL+ R+GL Q+K W
Sbjct: 83 NESPTCVGSKKARKARTI-FTDKQLQELENTFEKQKYLSVQDRMELAHRMGLTDTQVKTW 141
Query: 142 FQNRRTQMKTQ 152
+QNRRT+ K Q
Sbjct: 142 YQNRRTKWKRQ 152
>UNIPROTKB|G3ECA1 [details] [associations]
symbol:HoxA10 "Homebox A10" species:9823 "Sus scrofa"
[GO:0005634 "nucleus" evidence=IEA] [GO:0043565 "sequence-specific
DNA binding" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 KO:K09295
GeneTree:ENSGT00700000104054 EMBL:CU570959 EMBL:HQ700342
RefSeq:NP_001231267.1 UniGene:Ssc.100927 UniGene:Ssc.26254
SMR:G3ECA1 Ensembl:ENSSSCT00000028043 GeneID:100620451
KEGG:ssc:100620451 OMA:GNTKGEN Uniprot:G3ECA1
Length = 94
Score = 115 (45.5 bits), Expect = 9.0e-06, P = 9.0e-06
Identities = 30/83 (36%), Positives = 44/83 (53%)
Query: 78 EGASGDDQEANE-DGPPRKKKYHRHTPHQIQELESFFKECPHPDEKQRSELSRRLGLESK 136
+G S + AN +KK +T HQ ELE F + ++R E+SR + L +
Sbjct: 3 QGNSKGENAANWLTAKSGRKKRCPYTKHQTLELEKEFLFNMYLTRERRLEISRSVHLTDR 62
Query: 137 QIKFWFQNRRTQMKTQMERHENI 159
Q+K WFQNRR ++K +M R I
Sbjct: 63 QVKIWFQNRRMKLK-KMNRENRI 84
>WB|WBGene00000434 [details] [associations]
symbol:ceh-9 species:6239 "Caenorhabditis elegans"
[GO:0000976 "transcription regulatory region sequence-specific DNA
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0007275 GO:GO:0005634 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0000976 GeneTree:ENSGT00700000104206 EMBL:FO081483
EMBL:X52811 PIR:S13129 RefSeq:NP_001021797.1 UniGene:Cel.30778
ProteinModelPortal:P56407 SMR:P56407 EnsemblMetazoa:Y65B4BR.9
GeneID:267057 KEGG:cel:CELE_Y65B4BR.9 UCSC:Y65B4BR.9 CTD:267057
WormBase:Y65B4BR.9 eggNOG:NOG237842 InParanoid:P56407 OMA:FSGKQVF
NextBio:953494 Uniprot:P56407
Length = 147
Score = 115 (45.5 bits), Expect = 9.0e-06, P = 9.0e-06
Identities = 35/103 (33%), Positives = 53/103 (51%)
Query: 50 LIGEQFD-PSVVGRIREEEF-ESRSGSDNVEGASGDDQEANEDGPPRKKKYHRHTPHQIQ 107
LI + D P+V G I +EF +S D + + + + + RKK + Q+
Sbjct: 30 LIKDILDLPTVNGEI--DEFGRCKSSLDQAKESPIEKCQKTK----RKKARTTFSGKQVF 83
Query: 108 ELESFFKECPHPDEKQRSELSRRLGLESKQIKFWFQNRRTQMK 150
ELE F+ + RSEL++RL + Q+K WFQNRRT+ K
Sbjct: 84 ELEKQFEAKKYLSSSDRSELAKRLDVTETQVKIWFQNRRTKWK 126
>UNIPROTKB|I3LGC8 [details] [associations]
symbol:VSX1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0060040 "retinal
bipolar neuron differentiation" evidence=IEA] [GO:0042551 "neuron
maturation" evidence=IEA] [GO:0007601 "visual perception"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0007601
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
GeneTree:ENSGT00700000104013 GO:GO:0060040 GO:GO:0042551
InterPro:IPR023339 PROSITE:PS51496 OMA:WGSDHLK EMBL:FP565328
Ensembl:ENSSSCT00000025097 Uniprot:I3LGC8
Length = 365
Score = 136 (52.9 bits), Expect = 9.2e-06, P = 9.2e-06
Identities = 37/108 (34%), Positives = 55/108 (50%)
Query: 57 PSVVGR-----IREEEFESRSGSDNVEGASGDDQEANEDGPPRKKKYHRH----TPHQIQ 107
P V+GR IR++ ES S S+ + D + P K+K RH T HQ++
Sbjct: 119 PHVLGRSPPTSIRQKRSESVSTSEE-DSLPEDRSDLKLPPTPGKRKKRRHRTVFTAHQLE 177
Query: 108 ELESFFKECPHPDEKQRSELSRRLGLESKQIKFWFQNRRTQMKTQMER 155
ELE F E +PD R L+ + L +I+ WFQNRR + + + +R
Sbjct: 178 ELEKAFSEAHYPDVYAREMLAVKTELPEDRIQVWFQNRRAKWRKREKR 225
>UNIPROTKB|E2R114 [details] [associations]
symbol:HOXA11 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
CTD:3207 KO:K09296 OMA:GGCRETA InterPro:IPR021918 Pfam:PF12045
GeneTree:ENSGT00700000104263 EMBL:AAEX03009390
RefSeq:XP_003431971.2 Ensembl:ENSCAFT00000004754 GeneID:100683897
KEGG:cfa:100683897 Uniprot:E2R114
Length = 327
Score = 135 (52.6 bits), Expect = 9.5e-06, P = 9.5e-06
Identities = 42/150 (28%), Positives = 66/150 (44%)
Query: 4 GSNSVGMGSRVVAEIFPHCHSMASGAIAQFPLSLSIKNAMDAGEMGLIGEQFDPSVVGRI 63
G S G A + A+ A A + + G G + +
Sbjct: 162 GDKSADKGPPAAAATSAAAAAAAAAAAAAAAAATGTGTPATSSSDGGGGGCREAAAAAAA 221
Query: 64 REEEFESR-SGSDNVEGASG--DDQEANEDGPPRKKKYHRHTPHQIQELESFFKECPHPD 120
E+E R S + E +SG +D+ G +KK +T +QI+ELE F + +
Sbjct: 222 EEKERRRRPESSSSPESSSGHTEDKAGGSSGQRTRKKRCPYTKYQIRELEREFFFSVYIN 281
Query: 121 EKQRSELSRRLGLESKQIKFWFQNRRTQMK 150
+++R +LSR L L +Q+K WFQNRR + K
Sbjct: 282 KEKRLQLSRMLNLTDRQVKIWFQNRRMKEK 311
>MGI|MGI:96172 [details] [associations]
symbol:Hoxa11 "homeobox A11" species:10090 "Mus musculus"
[GO:0001501 "skeletal system development" evidence=IGI;IMP]
[GO:0001656 "metanephros development" evidence=IGI] [GO:0001658
"branching involved in ureteric bud morphogenesis" evidence=IGI]
[GO:0001759 "organ induction" evidence=IGI] [GO:0003677 "DNA
binding" evidence=TAS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005667 "transcription factor complex" evidence=IDA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IDA] [GO:0007501 "mesodermal cell fate specification"
evidence=IDA] [GO:0009952 "anterior/posterior pattern
specification" evidence=IGI] [GO:0009953 "dorsal/ventral pattern
formation" evidence=IGI] [GO:0009954 "proximal/distal pattern
formation" evidence=IGI] [GO:0010720 "positive regulation of cell
development" evidence=IGI] [GO:0030326 "embryonic limb
morphogenesis" evidence=IGI] [GO:0032330 "regulation of chondrocyte
differentiation" evidence=IGI] [GO:0032332 "positive regulation of
chondrocyte differentiation" evidence=IGI] [GO:0032993 "protein-DNA
complex" evidence=IDA] [GO:0035115 "embryonic forelimb
morphogenesis" evidence=IGI] [GO:0042733 "embryonic digit
morphogenesis" evidence=IGI] [GO:0043234 "protein complex"
evidence=IDA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0048589 "developmental growth"
evidence=IGI] [GO:0060272 "embryonic skeletal joint morphogenesis"
evidence=IGI] [GO:0060351 "cartilage development involved in
endochondral bone morphogenesis" evidence=IGI] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 MGI:MGI:96172 GO:GO:0005737
GO:GO:0045893 GO:GO:0005730 GO:GO:0009952 GO:GO:0003677
GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0005667
GO:GO:0007501 GO:GO:0032332 GO:GO:0048589 GO:GO:0009953
GO:GO:0009954 GO:GO:0042733 GO:GO:0001658 GO:GO:0001656
GO:GO:0060272 GO:GO:0032993 GO:GO:0001759 GO:GO:0060351 CTD:3207
eggNOG:NOG274734 HOGENOM:HOG000231898 HOVERGEN:HBG052048 KO:K09296
OMA:GGCRETA GO:GO:0010720 InterPro:IPR021918 Pfam:PF12045
OrthoDB:EOG4KKZ3X EMBL:U20371 EMBL:U20370 EMBL:AK133481
EMBL:BC119302 IPI:IPI00133248 PIR:G37290 RefSeq:NP_034580.1
UniGene:Mm.26954 ProteinModelPortal:P31311 SMR:P31311 IntAct:P31311
MINT:MINT-1172550 STRING:P31311 PhosphoSite:P31311 PRIDE:P31311
Ensembl:ENSMUST00000048026 GeneID:15396 KEGG:mmu:15396
UCSC:uc009byn.1 GeneTree:ENSGT00700000104263 InParanoid:P31311
NextBio:288080 Bgee:P31311 CleanEx:MM_HOXA11 Genevestigator:P31311
GermOnline:ENSMUSG00000038210 Uniprot:P31311
Length = 313
Score = 134 (52.2 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 42/136 (30%), Positives = 67/136 (49%)
Query: 16 AEIFPHCHSMASGA-IAQFPLSLSIKNAMDAGEMGLIGEQFDPSVVGRIREEEFESRSGS 74
AE P + S A +A ++ D G G G Q + + + R ES S
Sbjct: 166 AEKGPQAAAATSAAAVAAAATGAPATSSSDGGGGG--GCQ-EAAAEEKERRRRPESSSSP 222
Query: 75 DNVEGASGDDQEANEDGPPRKKKYHRHTPHQIQELESFFKECPHPDEKQRSELSRRLGLE 134
++ G + +D+ G +KK +T +QI+ELE F + ++++R +LSR L L
Sbjct: 223 ESSSGHT-EDKAGGSGGQRTRKKRCPYTKYQIRELEREFFFSVYINKEKRLQLSRMLNLT 281
Query: 135 SKQIKFWFQNRRTQMK 150
+Q+K WFQNRR + K
Sbjct: 282 DRQVKIWFQNRRMKEK 297
>UNIPROTKB|F1SPT6 [details] [associations]
symbol:ISX "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 GeneTree:ENSGT00700000104256
OMA:CCEAPKK EMBL:FP565732 Ensembl:ENSSSCT00000000161 Uniprot:F1SPT6
Length = 242
Score = 131 (51.2 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 37/123 (30%), Positives = 59/123 (47%)
Query: 73 GSDNVEGASGDDQEANEDGPPRKKKYHRH-----TPHQIQELESFFKECPHPDEKQRSEL 127
G+ A + Q D PP +KK R T Q+QELE F +PD R++L
Sbjct: 54 GAQQAAAADPEPQRPPRDQPPEEKKGKRRIRTTFTTEQLQELEKIFHFTHYPDVHIRNQL 113
Query: 128 SRRLGLESKQIKFWFQNRRTQMKTQMERHENIILRQEHDKLRAENEMLKDAMKNPTCNNC 187
+ R+ L +++ WFQN+R + + Q ER + L A +++ + A+ PT +
Sbjct: 114 AARINLPEARVQIWFQNQRAKRRKQ-ERTGS---------LGAPSQLSEAALAPPTNPDV 163
Query: 188 GGP 190
GP
Sbjct: 164 AGP 166
>UNIPROTKB|H9L2H7 [details] [associations]
symbol:Gga.20677 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104054 EMBL:AADN02023992
Ensembl:ENSGALT00000035897 Uniprot:H9L2H7
Length = 95
Score = 114 (45.2 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 25/65 (38%), Positives = 38/65 (58%)
Query: 95 KKKYHRHTPHQIQELESFFKECPHPDEKQRSELSRRLGLESKQIKFWFQNRRTQMKTQME 154
+KK +T HQ ELE F + ++R E+S+ + L +Q+K WFQNRR ++K +M
Sbjct: 22 RKKRCPYTKHQTLELEKEFLFNMYLTRERRLEISKSINLTDRQVKIWFQNRRMKLK-KMN 80
Query: 155 RHENI 159
R I
Sbjct: 81 RENRI 85
>UNIPROTKB|H9L2H8 [details] [associations]
symbol:Gga.20677 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104054 EMBL:AADN02023992
Ensembl:ENSGALT00000035898 Uniprot:H9L2H8
Length = 99
Score = 114 (45.2 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 25/65 (38%), Positives = 38/65 (58%)
Query: 95 KKKYHRHTPHQIQELESFFKECPHPDEKQRSELSRRLGLESKQIKFWFQNRRTQMKTQME 154
+KK +T HQ ELE F + ++R E+S+ + L +Q+K WFQNRR ++K +M
Sbjct: 26 RKKRCPYTKHQTLELEKEFLFNMYLTRERRLEISKSINLTDRQVKIWFQNRRMKLK-KMN 84
Query: 155 RHENI 159
R I
Sbjct: 85 RENRI 89
>UNIPROTKB|F1SHT6 [details] [associations]
symbol:F1SHT6 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104054 EMBL:CU480612
ProteinModelPortal:F1SHT6 SMR:F1SHT6 Ensembl:ENSSSCT00000018180
OMA:RRYEISQ Uniprot:F1SHT6
Length = 93
Score = 114 (45.2 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 26/65 (40%), Positives = 38/65 (58%)
Query: 95 KKKYHRHTPHQIQELESFFKECPHPDEKQRSELSRRLGLESKQIKFWFQNRRTQMKTQME 154
+KK +T HQ ELE F + ++R E+SR + L +Q+K WFQNRR ++K +M
Sbjct: 20 RKKRCPYTKHQTLELEKEFLFNMYLTRERRLEISRSVHLTDRQVKIWFQNRRMKLK-KMN 78
Query: 155 RHENI 159
R I
Sbjct: 79 RENRI 83
>TAIR|locus:2150901 [details] [associations]
symbol:HB-3 "homeobox 3" species:3702 "Arabidopsis
thaliana" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=ISM;IEA;ISS] [GO:0006355 "regulation
of transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA;IDA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR003106
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 Pfam:PF02183
PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0000976 KO:K09338 HOGENOM:HOG000006025
ProtClustDB:CLSN2684985 EMBL:AL353993 EMBL:X62644 EMBL:AK229364
EMBL:U09340 IPI:IPI00541406 IPI:IPI00570430 PIR:S20930 PIR:T49950
PIR:T52370 RefSeq:NP_568309.2 UniGene:At.49022
ProteinModelPortal:Q00466 SMR:Q00466 EnsemblPlants:AT5G15150.1
GeneID:831367 KEGG:ath:AT5G15150 GeneFarm:3985 TAIR:At5g15150
eggNOG:NOG322183 InParanoid:Q00466 OMA:EERNNIN PhylomeDB:Q00466
Genevestigator:Q00466 GermOnline:AT5G15150 Uniprot:Q00466
Length = 314
Score = 133 (51.9 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 32/103 (31%), Positives = 60/103 (58%)
Query: 76 NVEGASGDDQEANEDGPPRK--KKYHRHTPHQIQELESFFKECPHPDEKQRSELSRRLGL 133
N + G++ ++DG +K R Q++ LE F+ + +++ +L++ LGL
Sbjct: 92 NDQDQVGEEDNLSDDGSHMMLGEKKKRLNLEQVRALEKSFELGNKLEPERKMQLAKALGL 151
Query: 134 ESKQIKFWFQNRRTQMKT-QMERHENIILRQEHDKLRAENEML 175
+ +QI WFQNRR + KT Q+ER + L+++ D L+++N+ L
Sbjct: 152 QPRQIAIWFQNRRARWKTKQLERDYDS-LKKQFDVLKSDNDSL 193
>UNIPROTKB|O75360 [details] [associations]
symbol:PROP1 "Homeobox protein prophet of Pit-1"
species:9606 "Homo sapiens" [GO:0000976 "transcription regulatory
region sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0001568 "blood
vessel development" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0005667 "transcription factor complex"
evidence=IEA] [GO:0008013 "beta-catenin binding" evidence=IEA]
[GO:0008022 "protein C-terminus binding" evidence=IEA] [GO:0009953
"dorsal/ventral pattern formation" evidence=IEA] [GO:0016477 "cell
migration" evidence=IEA] [GO:0021979 "hypothalamus cell
differentiation" evidence=IEA] [GO:0043066 "negative regulation of
apoptotic process" evidence=IEA] [GO:0045944 "positive regulation
of transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0048850 "hypophysis morphogenesis" evidence=IEA] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=IEA]
[GO:0060126 "somatotropin secreting cell differentiation"
evidence=IEA] [GO:0007417 "central nervous system development"
evidence=TAS] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 GO:GO:0043066
GO:GO:0016477 GO:GO:0045944 GO:GO:0007417 GO:GO:0003700
GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0005667
GO:GO:0000122 GO:GO:0001568 GO:GO:0009953 GO:GO:0000976
GO:GO:0060070 Orphanet:95494 MIM:262600 Orphanet:226307
GO:GO:0021979 GO:GO:0060126 CTD:5626 eggNOG:NOG293463
HOGENOM:HOG000115706 HOVERGEN:HBG053691 KO:K09327 OrthoDB:EOG4BZN3X
GO:GO:0048850 OMA:TCFPHPY EMBL:AF076214 EMBL:AF076215 EMBL:AF041141
EMBL:AF041139 EMBL:AF041140 EMBL:AC136940 EMBL:BC069076
IPI:IPI00025308 RefSeq:NP_006252.3 UniGene:Hs.158301
ProteinModelPortal:O75360 SMR:O75360 STRING:O75360
PhosphoSite:O75360 PRIDE:O75360 Ensembl:ENST00000308304 GeneID:5626
KEGG:hsa:5626 UCSC:uc003mif.1 GeneCards:GC05M177419 HGNC:HGNC:9455
MIM:601538 neXtProt:NX_O75360 Orphanet:90695 PharmGKB:PA33808
InParanoid:O75360 PhylomeDB:O75360 GenomeRNAi:5626 NextBio:21868
Bgee:O75360 CleanEx:HS_PROP1 Genevestigator:O75360
GermOnline:ENSG00000175325 Uniprot:O75360
Length = 226
Score = 129 (50.5 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 30/79 (37%), Positives = 43/79 (54%)
Query: 79 GASGDDQEANEDGPPRKKKYHRHT--PHQIQELESFFKECPHPDEKQRSELSRRLGLESK 136
G S + + G P ++ HR T P Q+++LES F +PD R L+R GL
Sbjct: 52 GRSRFSPQGGQRGRPHSRRRHRTTFSPVQLEQLESAFGRNQYPDIWARESLARDTGLSEA 111
Query: 137 QIKFWFQNRRTQMKTQMER 155
+I+ WFQNRR + + Q ER
Sbjct: 112 RIQVWFQNRRAKQRKQ-ER 129
>UNIPROTKB|P24341 [details] [associations]
symbol:HOXD10 "Homeobox protein Hox-D10" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0007275 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 EMBL:D10287 IPI:IPI00593695
PIR:A37914 UniGene:Gga.20677 ProteinModelPortal:P24341 SMR:P24341
eggNOG:KOG0487 Uniprot:P24341
Length = 95
Score = 113 (44.8 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 25/65 (38%), Positives = 38/65 (58%)
Query: 95 KKKYHRHTPHQIQELESFFKECPHPDEKQRSELSRRLGLESKQIKFWFQNRRTQMKTQME 154
+KK +T HQ ELE F + ++R E+S+ + L +Q+K WFQNRR ++K +M
Sbjct: 22 RKKRCPYTKHQTLELEKEFLFNMYLTRERRLEISKSVNLTDRQVKIWFQNRRMKLK-KMS 80
Query: 155 RHENI 159
R I
Sbjct: 81 RENRI 85
>RGD|1586211 [details] [associations]
symbol:Hoxb8 "homeo box B8" species:10116 "Rattus norvegicus"
[GO:0000976 "transcription regulatory region sequence-specific DNA
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0007625 "grooming behavior" evidence=ISO]
[GO:0008344 "adult locomotory behavior" evidence=ISO] [GO:0009952
"anterior/posterior pattern specification" evidence=ISO]
[GO:0019233 "sensory perception of pain" evidence=ISO] [GO:0021516
"dorsal spinal cord development" evidence=ISO] [GO:0045638
"negative regulation of myeloid cell differentiation"
evidence=ISO;ISS] [GO:0048704 "embryonic skeletal system
morphogenesis" evidence=ISO] [GO:0048705 "skeletal system
morphogenesis" evidence=ISO] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
RGD:1586211 GO:GO:0007275 GO:GO:0005634 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0000976 GO:GO:0045638 eggNOG:NOG314669 EMBL:M37565
IPI:IPI00476117 PIR:A43559 UniGene:Rn.231433
ProteinModelPortal:P18863 SMR:P18863 STRING:P18863 UCSC:RGD:1586211
Genevestigator:P18863 Uniprot:P18863
Length = 92
Score = 113 (44.8 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 25/71 (35%), Positives = 40/71 (56%)
Query: 101 HTPHQIQELESFFKECPHPDEKQRSELSRRLGLESKQIKFWFQNRRTQMKTQMERHENII 160
++ +Q ELE F P+ K+R E+S LGL +Q+K WFQNRR + K + + +
Sbjct: 18 YSRYQTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWKKENNKDKFPS 77
Query: 161 LRQEHDKLRAE 171
+ E ++L E
Sbjct: 78 SKCEQEELEKE 88
>RGD|1305667 [details] [associations]
symbol:Vsx1 "visual system homeobox 1" species:10116 "Rattus
norvegicus" [GO:0003674 "molecular_function" evidence=ND]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0007601
"visual perception" evidence=IEA;ISO] [GO:0008150
"biological_process" evidence=ND] [GO:0042551 "neuron maturation"
evidence=IEA;ISO] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0048666 "neuron development" evidence=ISO]
[GO:0060040 "retinal bipolar neuron differentiation"
evidence=IEA;ISO] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 RGD:1305667 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR023339
PROSITE:PS51496 IPI:IPI00877372 Ensembl:ENSRNOT00000009723
UCSC:RGD:1305667 Uniprot:D3ZV45
Length = 360
Score = 134 (52.2 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 32/95 (33%), Positives = 50/95 (52%)
Query: 70 SRSGSDNVEGASGDDQEANEDGPP-------RKKKYHR--HTPHQIQELESFFKECPHPD 120
S+ S+N+ + GD ++ P RKK+ HR T HQ++ELE F E +PD
Sbjct: 135 SQQRSENISTSDGDSPSEEKNDPKMSLTLGKRKKRRHRTVFTAHQLEELEKAFGEAHYPD 194
Query: 121 EKQRSELSRRLGLESKQIKFWFQNRRTQMKTQMER 155
R L+ + L +I+ WFQNRR + + + +R
Sbjct: 195 VYAREMLAVKTELPEDRIQVWFQNRRAKWRKREKR 229
>UNIPROTKB|A5D7C5 [details] [associations]
symbol:MEOX2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0060173 "limb
development" evidence=IEA] [GO:0060021 "palate development"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0007519 "skeletal muscle tissue development"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0001757
"somite specification" evidence=IEA] [GO:0001525 "angiogenesis"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0005737
GO:GO:0043565 GO:GO:0003700 GO:GO:0001525 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0060021
GO:GO:0060173 eggNOG:NOG250192 GO:GO:0007519 GO:GO:0001757
GeneTree:ENSGT00660000095141 HOGENOM:HOG000230987
HOVERGEN:HBG052456 KO:K09322 CTD:4223 OMA:DHTLFGC OrthoDB:EOG4PZJ7H
EMBL:DAAA02009993 EMBL:DAAA02009994 EMBL:DAAA02009995 EMBL:BC140506
IPI:IPI00711174 RefSeq:NP_001091514.1 UniGene:Bt.63482 SMR:A5D7C5
Ensembl:ENSBTAT00000004198 GeneID:518540 KEGG:bta:518540
InParanoid:A5D7C5 NextBio:20872676 Uniprot:A5D7C5
Length = 303
Score = 132 (51.5 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 40/116 (34%), Positives = 55/116 (47%)
Query: 41 NAMDAGEMGLIGEQFDPSVVGR--IREEEFESRSGSDNVEGASGDDQEANE----DGPPR 94
N+ G G P GR + E E RSGS + S D QE N + PR
Sbjct: 129 NSSSLGSSTPTGAACPPGDYGRQALSPAEAEKRSGSKR-KSDSSDSQEGNYKSEVNSKPR 187
Query: 95 KKKYHRHTPHQIQELESFFKECPHPDEKQRSELSRRLGLESKQIKFWFQNRRTQMK 150
K++ T QI+ELE+ F + +R E++ L L +Q+K WFQNRR + K
Sbjct: 188 KERT-AFTKEQIRELEAEFAHHNYLTRLRRYEIAVNLDLTERQVKVWFQNRRMKWK 242
>TAIR|locus:2079542 [details] [associations]
symbol:HB-12 "homeobox 12" species:3702 "Arabidopsis
thaliana" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM;IEA;ISS;IDA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0009651 "response
to salt stress" evidence=IGI;RCA] [GO:0009737 "response to abscisic
acid stimulus" evidence=IEP;RCA;IMP] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IDA]
[GO:0009414 "response to water deprivation" evidence=IEP]
[GO:0009615 "response to virus" evidence=IEP] [GO:0006970 "response
to osmotic stress" evidence=IEP] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR003106 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 Pfam:PF02183 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 GO:GO:0007275
GO:GO:0009737 GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0045893 GO:GO:0009651 GO:GO:0009414 GO:GO:0003700
GO:GO:0006351 GO:GO:0009615 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0000976 EMBL:AF001949 EMBL:AL138642 EMBL:AY059828
EMBL:BT002206 EMBL:AY087187 IPI:IPI00522302 PIR:T47981 PIR:T51751
RefSeq:NP_191748.1 UniGene:At.25517 HSSP:P02836
ProteinModelPortal:Q9M276 SMR:Q9M276 STRING:Q9M276
EnsemblPlants:AT3G61890.1 GeneID:825362 KEGG:ath:AT3G61890
GeneFarm:3970 TAIR:At3g61890 eggNOG:NOG252905 HOGENOM:HOG000006310
InParanoid:Q9M276 KO:K09338 OMA:HELMNIV PhylomeDB:Q9M276
ProtClustDB:CLSN2683559 Genevestigator:Q9M276 GermOnline:AT3G61890
Uniprot:Q9M276
Length = 235
Score = 129 (50.5 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 27/90 (30%), Positives = 52/90 (57%)
Query: 88 NEDGPPRKKKYHRHTPHQIQELESFFKECPHPDEKQRSELSRRLGLESKQIKFWFQNRRT 147
N+ + R + QI+ LE F+ + +++ +++R LGL+ +Q+ WFQN+R
Sbjct: 21 NKKKMKKSNNQKRFSEEQIKSLELIFESETRLEPRKKVQVARELGLQPRQVAIWFQNKRA 80
Query: 148 QMKT-QMERHENIILRQEHDKLRAENEMLK 176
+ KT Q+E+ N LR ++ L ++ E++K
Sbjct: 81 RWKTKQLEKEYNT-LRANYNNLASQFEIMK 109
>TAIR|locus:2129061 [details] [associations]
symbol:HAT1 species:3702 "Arabidopsis thaliana"
[GO:0000976 "transcription regulatory region sequence-specific DNA
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA;ISS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM;IEA;ISS;IDA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003006
"developmental process involved in reproduction" evidence=IGI]
[GO:0005515 "protein binding" evidence=IPI] [GO:0010582 "floral
meristem determinacy" evidence=IGI] [GO:0043621 "protein
self-association" evidence=IPI] [GO:0048467 "gynoecium development"
evidence=IGI] [GO:0048507 "meristem development" evidence=IGI]
[GO:0080127 "fruit septum development" evidence=IGI]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR003106
InterPro:IPR006712 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 Pfam:PF02183 Pfam:PF04618 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00340 SMART:SM00389
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0010582
EMBL:Z97343 GO:GO:0000976 KO:K09338 HOGENOM:HOG000241612
eggNOG:KOG0483 EMBL:AL161546 EMBL:U09332 EMBL:U09333 EMBL:AJ441252
EMBL:BT005756 EMBL:BT006112 EMBL:AY087322 EMBL:AK228587
IPI:IPI00538010 PIR:B71444 RefSeq:NP_193476.1 UniGene:At.19738
ProteinModelPortal:P46600 SMR:P46600 EnsemblPlants:AT4G17460.1
GeneID:827457 KEGG:ath:AT4G17460 GeneFarm:3979 TAIR:At4g17460
InParanoid:P46600 OMA:LMCPSCE PhylomeDB:P46600
ProtClustDB:CLSN2685891 Genevestigator:P46600 GermOnline:AT4G17460
GO:GO:0080127 GO:GO:0048467 Uniprot:P46600
Length = 282
Score = 131 (51.2 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 43/132 (32%), Positives = 69/132 (52%)
Query: 58 SVVGRIREEEFESRSGS---DNVE------GASG-DDQEANEDGPPRKKKYHRHTPHQIQ 107
+V G+ R E E SG D+++ + G D+E + G +KK R + Q
Sbjct: 87 TVSGKRRSTEREGTSGGGCGDDLDITLDRSSSRGTSDEEEDYGGETCRKKL-RLSKDQSA 145
Query: 108 ELESFFKECPHPDEKQRSELSRRLGLESKQIKFWFQNRRTQMKTQMERHENIILRQEHDK 167
LE FKE + KQ+ L+++LGL ++Q++ WFQNRR + K + + L++ +K
Sbjct: 146 VLEDTFKEHNTLNPKQKLALAKKLGLTARQVEVWFQNRRARTKLKQTEVDCEYLKRCVEK 205
Query: 168 LRAENEML-KDA 178
L EN L K+A
Sbjct: 206 LTEENRRLEKEA 217
>UNIPROTKB|F1PP15 [details] [associations]
symbol:RHOXF1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0019953
"sexual reproduction" evidence=IEA] [GO:0043565 "sequence-specific
DNA binding" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0019953 OMA:NKRARCR
GeneTree:ENSGT00530000063899 EMBL:AAEX03026834
Ensembl:ENSCAFT00000029306 Uniprot:F1PP15
Length = 182
Score = 123 (48.4 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 38/124 (30%), Positives = 61/124 (49%)
Query: 43 MDAGEMGLIGEQFDPSVVGRIREEEFESRSGSDNVEGASGDDQE----ANEDGP------ 92
+D G GL+G D + G E + G + + G QE A E+ P
Sbjct: 38 IDEGNPGLVG---DINCEGDFNREGIVNHEG-EGIHEVGGGVQELGQLAPEELPQAVAAR 93
Query: 93 ---PRKKKY---HRHTPHQIQELESFFKECPHPDEKQRSELSRRLGLESKQIKFWFQNRR 146
PR+++ ++ T Q+QELES F+ +PD R EL+RR+ + +++ WF+NRR
Sbjct: 94 APQPRRRRRAQRNKFTQVQVQELESAFQHTQYPDVLTRQELARRMDVTEIRVQVWFKNRR 153
Query: 147 TQMK 150
+ K
Sbjct: 154 AKYK 157
>RGD|1564332 [details] [associations]
symbol:Rhox11 "reproductive homeobox 11" species:10116 "Rattus
norvegicus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057 Pfam:PF00046
PROSITE:PS50071 SMART:SM00389 RGD:1564332 GO:GO:0005634
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
OrthoDB:EOG4FFD33 GeneTree:ENSGT00530000063899 EMBL:DQ058658
IPI:IPI00358669 RefSeq:NP_001020044.1 UniGene:Rn.153915
Ensembl:ENSRNOT00000035449 GeneID:298346 KEGG:rno:298346
UCSC:RGD:1564332 CTD:194738 eggNOG:KOG0490 HOGENOM:HOG000136395
HOVERGEN:HBG067324 InParanoid:Q4TU72 NextBio:643503
Genevestigator:Q4TU72 Uniprot:Q4TU72
Length = 215
Score = 127 (49.8 bits), Expect = 2.0e-05, P = 2.0e-05
Identities = 26/78 (33%), Positives = 48/78 (61%)
Query: 93 PRKKKYHRHTPHQIQELESFFKECPHPDEKQRSELSRRLGLESKQIKFWFQNRRTQM-KT 151
PRK ++ TP Q+ E+++ F+E +PD +R EL+ + ++ +++K WF N+R ++ K
Sbjct: 97 PRKP--YKFTPGQLWEMQAVFEETQYPDAFRRKELAELMNVDEQKVKDWFNNKRAKLRKI 154
Query: 152 QMERHENIILRQEHDKLR 169
Q E + I+ D+LR
Sbjct: 155 QREILKGKIITPTQDELR 172
>UNIPROTKB|F1P2W4 [details] [associations]
symbol:NKX6-2 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0000976 GeneTree:ENSGT00680000099625 EMBL:AADN02047157
EMBL:AADN02047158 IPI:IPI00822098 Ensembl:ENSGALT00000038553
Uniprot:F1P2W4
Length = 250
Score = 129 (50.5 bits), Expect = 2.2e-05, P = 2.2e-05
Identities = 38/112 (33%), Positives = 59/112 (52%)
Query: 88 NEDGPPRKKKYHRHT--PHQIQELESFFKECPHPDEKQRSELSRRLGLESKQIKFWFQNR 145
++DG KKK+ R T QI LE F++ + +R+ L+ LG+ Q+K WFQNR
Sbjct: 124 DKDG---KKKHSRPTFSGQQIFALEKTFEQTKYLAGPERARLAYSLGMTESQVKVWFQNR 180
Query: 146 RTQMKTQMERH--ENIILRQEHDKLRAENEMLKDAMKNPTCNNCGGPAVPGS 195
RT+ + +RH E +++HD +E E LK++ N + P P S
Sbjct: 181 RTKWR---KRHAAEMASAKKKHD---SETEKLKESSDNEDDDEYNKPLDPNS 226
>RGD|3079 [details] [associations]
symbol:Meox2 "mesenchyme homeobox 2" species:10116 "Rattus
norvegicus" [GO:0001525 "angiogenesis" evidence=IEA;ISO] [GO:0001757
"somite specification" evidence=IEA;ISO] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA;ISO] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0007519 "skeletal muscle tissue
development" evidence=IEA;ISO] [GO:0016607 "nuclear speck"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA;ISO] [GO:0060021 "palate development" evidence=IEA;ISO]
[GO:0060173 "limb development" evidence=IEA;ISO] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 RGD:3079 GO:GO:0005737 GO:GO:0016607
GO:GO:0043565 GO:GO:0003700 GO:GO:0001525 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0060021
GO:GO:0060173 eggNOG:NOG250192 GO:GO:0007519 GO:GO:0001757
HOGENOM:HOG000230987 HOVERGEN:HBG052456 KO:K09322 CTD:4223
OrthoDB:EOG4PZJ7H EMBL:Z17223 IPI:IPI00210232 PIR:A48130
RefSeq:NP_058845.1 UniGene:Rn.34890 ProteinModelPortal:P39020
SMR:P39020 STRING:P39020 GeneID:29279 KEGG:rno:29279 UCSC:RGD:3079
InParanoid:P39020 NextBio:608651 Genevestigator:P39020
GermOnline:ENSRNOG00000006588 Uniprot:P39020
Length = 303
Score = 131 (51.2 bits), Expect = 2.2e-05, P = 2.2e-05
Identities = 40/116 (34%), Positives = 55/116 (47%)
Query: 41 NAMDAGEMGLIGEQFDPSVVGR--IREEEFESRSGSDNVEGASGDDQEANE----DGPPR 94
N+ G G P GR + E E RSGS + S D QE N + PR
Sbjct: 129 NSSSLGSSTPTGAACAPRDYGRQALSPAEVEKRSGSKR-KSDSSDSQEGNYKSEVNSKPR 187
Query: 95 KKKYHRHTPHQIQELESFFKECPHPDEKQRSELSRRLGLESKQIKFWFQNRRTQMK 150
K++ T QI+ELE+ F + +R E++ L L +Q+K WFQNRR + K
Sbjct: 188 KERT-AFTKEQIRELEAEFAHHNYLTRLRRYEIAVNLDLTERQVKVWFQNRRMKWK 242
>UNIPROTKB|P39020 [details] [associations]
symbol:Meox2 "Homeobox protein MOX-2" species:10116 "Rattus
norvegicus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 RGD:3079 GO:GO:0005737 GO:GO:0016607
GO:GO:0043565 GO:GO:0003700 GO:GO:0001525 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0060021
GO:GO:0060173 eggNOG:NOG250192 GO:GO:0007519 GO:GO:0001757
HOGENOM:HOG000230987 HOVERGEN:HBG052456 KO:K09322 CTD:4223
OrthoDB:EOG4PZJ7H EMBL:Z17223 IPI:IPI00210232 PIR:A48130
RefSeq:NP_058845.1 UniGene:Rn.34890 ProteinModelPortal:P39020
SMR:P39020 STRING:P39020 GeneID:29279 KEGG:rno:29279 UCSC:RGD:3079
InParanoid:P39020 NextBio:608651 Genevestigator:P39020
GermOnline:ENSRNOG00000006588 Uniprot:P39020
Length = 303
Score = 131 (51.2 bits), Expect = 2.2e-05, P = 2.2e-05
Identities = 40/116 (34%), Positives = 55/116 (47%)
Query: 41 NAMDAGEMGLIGEQFDPSVVGR--IREEEFESRSGSDNVEGASGDDQEANE----DGPPR 94
N+ G G P GR + E E RSGS + S D QE N + PR
Sbjct: 129 NSSSLGSSTPTGAACAPRDYGRQALSPAEVEKRSGSKR-KSDSSDSQEGNYKSEVNSKPR 187
Query: 95 KKKYHRHTPHQIQELESFFKECPHPDEKQRSELSRRLGLESKQIKFWFQNRRTQMK 150
K++ T QI+ELE+ F + +R E++ L L +Q+K WFQNRR + K
Sbjct: 188 KERT-AFTKEQIRELEAEFAHHNYLTRLRRYEIAVNLDLTERQVKVWFQNRRMKWK 242
>TAIR|locus:2129136 [details] [associations]
symbol:HB-2 "homeobox protein 2" species:3702
"Arabidopsis thaliana" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=ISM;IEA;ISS;IDA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA;ISS]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA;IDA]
[GO:0008283 "cell proliferation" evidence=IMP] [GO:0009733
"response to auxin stimulus" evidence=IMP] [GO:0009826
"unidimensional cell growth" evidence=IMP] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IDA]
[GO:0048364 "root development" evidence=IMP] [GO:0009735 "response
to cytokinin stimulus" evidence=IEP] [GO:0009641 "shade avoidance"
evidence=IEP] [GO:0010017 "red or far-red light signaling pathway"
evidence=IEP] [GO:0010218 "response to far red light" evidence=IEP]
[GO:0042803 "protein homodimerization activity" evidence=IDA]
[GO:0010016 "shoot system morphogenesis" evidence=IMP]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR003106
InterPro:IPR006712 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 Pfam:PF02183 Pfam:PF04618 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00340 SMART:SM00389
GO:GO:0005634 GO:GO:0045892 GO:GO:0042803 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0009735 GO:GO:0009733 GO:GO:0008283
GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 GO:GO:0010218
GO:GO:0048364 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009826
EMBL:AL161544 GO:GO:0009585 GO:GO:0000976 GO:GO:0010017 KO:K09338
GO:GO:0009641 EMBL:Z97342 EMBL:M90394 EMBL:Z19602 EMBL:X68145
EMBL:X68146 EMBL:AF375453 EMBL:AY081747 EMBL:EF193551 EMBL:EF193552
EMBL:EF193553 EMBL:EF193554 EMBL:EF193555 EMBL:EF193556
EMBL:EF193557 EMBL:EF193558 EMBL:EF193559 EMBL:EF193560
EMBL:EF193561 EMBL:EF193562 EMBL:EF193563 EMBL:EF193564
EMBL:EF193565 EMBL:AY174653 EMBL:AY174654 EMBL:AY174655
EMBL:AY174656 IPI:IPI00517186 PIR:S31424 RefSeq:NP_193411.1
UniGene:At.24419 UniGene:At.74809 ProteinModelPortal:Q05466
SMR:Q05466 IntAct:Q05466 STRING:Q05466 EnsemblPlants:AT4G16780.1
GeneID:827384 KEGG:ath:AT4G16780 GeneFarm:3977 TAIR:At4g16780
eggNOG:NOG150160 InParanoid:Q05466 OMA:EDGDNSR PhylomeDB:Q05466
ProtClustDB:CLSN2685845 Genevestigator:Q05466 GermOnline:AT4G16780
GO:GO:0010016 Uniprot:Q05466
Length = 284
Score = 130 (50.8 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 34/106 (32%), Positives = 56/106 (52%)
Query: 71 RSGSDNVEGASGDDQEANEDGPPRKKKYHRHTPHQIQELESFFKECPHPDEKQRSELSRR 130
R + +G+ G + EDG +KK R + Q LE FK+ + KQ+ L+++
Sbjct: 106 REEDTDPQGSRGISDD--EDGDNSRKKL-RLSKDQSAILEETFKDHSTLNPKQKQALAKQ 162
Query: 131 LGLESKQIKFWFQNRRTQMKTQMERHENIILRQEHDKLRAENEMLK 176
LGL ++Q++ WFQNRR + K + + LR+ + L EN L+
Sbjct: 163 LGLRARQVEVWFQNRRARTKLKQTEVDCEFLRRCCENLTEENRRLQ 208
>UNIPROTKB|F1RQG1 [details] [associations]
symbol:PRRX2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0007275 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR003654
Pfam:PF03826 PROSITE:PS50803 GeneTree:ENSGT00700000104279
OMA:GVSMANS EMBL:CU915659 Ensembl:ENSSSCT00000006245 Uniprot:F1RQG1
Length = 211
Score = 126 (49.4 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 36/114 (31%), Positives = 51/114 (44%)
Query: 46 GEMGLIGE-QFDPSVVGRIREEEFESRSGSDNVEGASGDDQEANEDG----PPRKKKYHR 100
GE+ G P+ RE SG + A+ D E G RKKK R
Sbjct: 5 GEVAATGRLAARPAARAEAREGAAREPSGGSSGSEAAPQDGECPSPGRGGAAKRKKKQRR 64
Query: 101 H----TPHQIQELESFFKECPHPDEKQRSELSRRLGLESKQIKFWFQNRRTQMK 150
+ Q+Q LE F+ +PD R EL+RR+ L +++ WFQNRR + +
Sbjct: 65 NRTTFNSSQLQALERVFERTHYPDAFVREELARRVNLSEARVQVWFQNRRAKFR 118
>UNIPROTKB|F1NNC8 [details] [associations]
symbol:TLX1 "T-cell leukemia homeobox protein 1"
species:9031 "Gallus gallus" [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0007417 "central nervous system development"
evidence=IEA] [GO:0008284 "positive regulation of cell
proliferation" evidence=IEA] [GO:0030182 "neuron differentiation"
evidence=IEA] [GO:0045165 "cell fate commitment" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0046982 "protein
heterodimerization activity" evidence=IEA] [GO:0048536 "spleen
development" evidence=IEA] [GO:0048645 "organ formation"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0008284 GO:GO:0043565
GO:GO:0045944 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0045165
GeneTree:ENSGT00700000104454 IPI:IPI00573767 EMBL:AADN02030793
Ensembl:ENSGALT00000012707 OMA:XLISELE ArrayExpress:F1NNC8
Uniprot:F1NNC8
Length = 141
Score = 111 (44.1 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 30/94 (31%), Positives = 48/94 (51%)
Query: 92 PPRKKKYHRH-TPHQIQELESFFKECPHPDEKQRSELSRRLGLESKQIKFWFQNRRTQMK 150
PP+KKK T QI ELE F + +R+ L++ L + Q+K WFQNRRT+ +
Sbjct: 9 PPKKKKPRTSFTRLQICELEKRFHRQKYLASAERAALAKALKMTDAQVKTWFQNRRTKWR 68
Query: 151 TQMERHENIILRQEHDKL--RAENEMLKDAMKNP 182
Q E RQ+ +++ + + E + + P
Sbjct: 69 RQTAE-EREAERQQANRILMQLQQEAFQKTINQP 101
>UNIPROTKB|F1MCF6 [details] [associations]
symbol:CDX1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0060349 "bone
morphogenesis" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0009952 "anterior/posterior pattern specification"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0000976
"transcription regulatory region sequence-specific DNA binding"
evidence=IEA] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
GO:GO:0009952 GO:GO:0045944 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00530000063388 GO:GO:0000976 GO:GO:0060349
EMBL:DAAA02020624 IPI:IPI00867478 Ensembl:ENSBTAT00000015934
OMA:MTIKEEY Uniprot:F1MCF6
Length = 118
Score = 111 (44.1 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 25/60 (41%), Positives = 35/60 (58%)
Query: 91 GPPRKKKYHR--HTPHQIQELESFFKECPHPDEKQRSELSRRLGLESKQIKFWFQNRRTQ 148
G R K +R +T HQ ELE F + +++SEL+ LGL +Q+K WFQNRR +
Sbjct: 2 GKTRTKDKYRVVYTDHQRLELEKEFHYSRYITIRRKSELAANLGLTERQVKIWFQNRRAK 61
>UNIPROTKB|I3L383 [details] [associations]
symbol:HOXB8 "Homeobox protein Hox-B8" species:9606 "Homo
sapiens" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0000976 EMBL:AC103702 HGNC:HGNC:5119 Ensembl:ENST00000498634
Uniprot:I3L383
Length = 128
Score = 111 (44.1 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 27/78 (34%), Positives = 44/78 (56%)
Query: 101 HTPHQIQELESFFKECPHPDEKQRSELSRRLGLESKQIKFWFQNRRTQMKTQMERHENII 160
++ +Q ELE F P+ K+R E+S LGL +Q+K WFQNRR + K + + +
Sbjct: 2 YSRYQTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWKKENNKDKFPS 61
Query: 161 LRQEHDKLRAENEMLKDA 178
+ E ++L E + L+ A
Sbjct: 62 SKCEQEEL--EKQKLERA 77
>WB|WBGene00006778 [details] [associations]
symbol:unc-42 species:6239 "Caenorhabditis elegans"
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0040011 "locomotion" evidence=IMP] [GO:0030163 "protein
catabolic process" evidence=IMP] [GO:0045944 "positive regulation
of transcription from RNA polymerase II promoter" evidence=IMP]
[GO:0048665 "neuron fate specification" evidence=IMP]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0043565 GO:GO:0045944 GO:GO:0040011
GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0030163
GO:GO:0048665 GeneTree:ENSGT00700000104273 EMBL:Z70754 EMBL:Z70780
PIR:T22296 RefSeq:NP_505519.3 ProteinModelPortal:G5EBS8 SMR:G5EBS8
IntAct:G5EBS8 EnsemblMetazoa:F58E6.10 GeneID:192081
KEGG:cel:CELE_F58E6.10 CTD:192081 WormBase:F58E6.10 OMA:AAFQKSH
NextBio:951506 Uniprot:G5EBS8
Length = 264
Score = 129 (50.5 bits), Expect = 2.6e-05, P = 2.6e-05
Identities = 42/136 (30%), Positives = 65/136 (47%)
Query: 56 DPSVVGRIREEEFESRSGSDNVEGASGDDQEANEDGPPRKKKYHR--HTPHQIQELESFF 113
DPS G ++ + E GS V G+S A P +++ HR T Q+QEL++ F
Sbjct: 52 DPSSDGAFKKIKTEGLGGS--VFGSS----IAGVTNTPARRR-HRTTFTQEQLQELDAAF 104
Query: 114 KECPHPDEKQRSELSRRLGLESKQIKFWFQNRRTQMKTQMERHENIILRQEHDKL-RAEN 172
++ +PD R EL+R L +I+ WFQNRR + + E+ N + H L N
Sbjct: 105 QKSHYPDIYVREELARITKLNEARIQVWFQNRRAKHRKH-EKQLNKAINPPHSFLSNPAN 163
Query: 173 EMLKDAMKNPTCNNCG 188
+++ M N G
Sbjct: 164 TLMRQGMYPAALNRDG 179
>TAIR|locus:2170194 [details] [associations]
symbol:HAT14 "homeobox from Arabidopsis thaliana"
species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM;IEA;ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] InterPro:IPR001356
InterPro:IPR003106 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 Pfam:PF02183 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00340 SMART:SM00389 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 KO:K09338 HOGENOM:HOG000241612
EMBL:AP002032 EMBL:AJ431182 EMBL:BT005879 EMBL:AK227423 EMBL:U09334
IPI:IPI00522942 IPI:IPI00547278 PIR:T52367 RefSeq:NP_196289.2
RefSeq:NP_974743.1 UniGene:At.357 ProteinModelPortal:P46665
SMR:P46665 IntAct:P46665 PaxDb:P46665 PRIDE:P46665
EnsemblPlants:AT5G06710.1 GeneID:830560 KEGG:ath:AT5G06710
GeneFarm:3984 TAIR:At5g06710 eggNOG:NOG310615 InParanoid:P46665
OMA:KTSTPFY PhylomeDB:P46665 ProtClustDB:CLSN2917817
Genevestigator:P46665 Uniprot:P46665
Length = 336
Score = 131 (51.2 bits), Expect = 2.8e-05, P = 2.8e-05
Identities = 40/119 (33%), Positives = 58/119 (48%)
Query: 65 EEEFESRSGSDNVE-GASGDDQEANED--GPPRKKKYHRHTPHQIQELESFFKECPHPDE 121
E R D VE AS E N+D G RKK R + Q LE FKE +
Sbjct: 157 ERRSNKRDIDDEVERSASRASNEDNDDENGSTRKKL--RLSKDQSAFLEDSFKEHSTLNP 214
Query: 122 KQRSELSRRLGLESKQIKFWFQNRRTQMKTQMERHENIILRQEHDKLRAENEMLKDAMK 180
KQ+ L+++L L +Q++ WFQNRR + K + + L++ + L EN L+ +K
Sbjct: 215 KQKIALAKQLNLRPRQVEVWFQNRRARTKLKQTEVDCEYLKRCCESLTEENRRLQKEVK 273
>UNIPROTKB|E1C121 [details] [associations]
symbol:PITX1 "Pituitary homeobox 1" species:9031 "Gallus
gallus" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR016233
InterPro:IPR017970 Pfam:PF00046 PIRSF:PIRSF000563 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0007275 GO:GO:0005634
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
InterPro:IPR003654 Pfam:PF03826 PROSITE:PS50803 UniGene:Gga.962
CTD:5307 KO:K09356 GeneTree:ENSGT00700000104438 EMBL:AADN02028369
IPI:IPI00971376 RefSeq:NP_001161156.1 RefSeq:NP_001161157.1
RefSeq:NP_001161158.1 Ensembl:ENSGALT00000009427 GeneID:374201
KEGG:gga:374201 NextBio:20813705 Uniprot:E1C121
Length = 302
Score = 130 (50.8 bits), Expect = 2.8e-05, P = 2.8e-05
Identities = 33/104 (31%), Positives = 52/104 (50%)
Query: 66 EEFESRSGSDNVEGASGDDQEANEDG----PPRKKKYHRHTPH----QIQELESFFKECP 117
E S S V ++ NEDG P +KKK R H Q+QELE+ F+
Sbjct: 42 ENSASESSDTEVPEKERSGEQKNEDGAADDPAKKKKQRRQRTHFTSQQLQELEATFQRNR 101
Query: 118 HPDEKQRSELSRRLGLESKQIKFWFQNRRTQMKTQMERHENIIL 161
+PD R E++ L +++ WF+NRR + + + ER++ + L
Sbjct: 102 YPDMSMREEIAVWTNLTEPRVRVWFKNRRAKWRKR-ERNQQMDL 144
>UNIPROTKB|Q6XYB7 [details] [associations]
symbol:LBX2 "Transcription factor LBX2" species:9606 "Homo
sapiens" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 EMBL:CH471053
GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
SUPFAM:SSF46689 HSSP:P13297 HOGENOM:HOG000007247 HOVERGEN:HBG006244
KO:K09353 EMBL:AY305861 EMBL:AY203953 EMBL:BC150517 IPI:IPI00376237
IPI:IPI00550811 RefSeq:NP_001009812.1 UniGene:Hs.722114
ProteinModelPortal:Q6XYB7 SMR:Q6XYB7 IntAct:Q6XYB7
PhosphoSite:Q6XYB7 DMDM:74749508 PaxDb:Q6XYB7 PRIDE:Q6XYB7
DNASU:85474 Ensembl:ENST00000377566 Ensembl:ENST00000460508
GeneID:85474 KEGG:hsa:85474 UCSC:uc002slv.4 UCSC:uc002slw.3
CTD:85474 GeneCards:GC02M074724 HGNC:HGNC:15525 HPA:HPA044257
MIM:607164 neXtProt:NX_Q6XYB7 PharmGKB:PA30305 eggNOG:NOG235470
InParanoid:Q6XYB7 OMA:MVPRAPS GenomeRNAi:85474 NextBio:76128
ArrayExpress:Q6XYB7 Bgee:Q6XYB7 CleanEx:HS_LBX2
Genevestigator:Q6XYB7 Uniprot:Q6XYB7
Length = 198
Score = 124 (48.7 bits), Expect = 2.9e-05, P = 2.9e-05
Identities = 45/138 (32%), Positives = 70/138 (50%)
Query: 78 EGASGDDQEANEDGP-PRKKKYHR--HTPHQIQELESFFKECPHPDEKQRSELSRRLGLE 134
EG +G D A GP RK++ R T Q+ ELE F + +R L+ RLGL
Sbjct: 68 EGRAGPD--ALGPGPFGRKRRKSRTAFTAQQVLELERRFVFQKYLAPSERDGLATRLGLA 125
Query: 135 SKQIKFWFQNRRTQMKTQMERHENIILRQEHDKLRAEN-EMLKD-AMKN--PTCNNCGGP 190
+ Q+ WFQNRR ++K +E +R + LRA + E+L A+ P C GP
Sbjct: 126 NAQVVTWFQNRRAKLKRDVEE-----MRADVASLRALSPEVLCSLALPEGAPDPGLCLGP 180
Query: 191 AVPGSVSNYELQQLRIEN 208
A P S + +++++++
Sbjct: 181 AGPDSRPHLSDEEIQVDD 198
>UNIPROTKB|Q0P031 [details] [associations]
symbol:vsx1 "Visual system homeobox 1" species:8355
"Xenopus laevis" [GO:0003674 "molecular_function" evidence=ND]
[GO:0005634 "nucleus" evidence=ISS] [GO:0060040 "retinal bipolar
neuron differentiation" evidence=IEP] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0060040 InterPro:IPR023339 PROSITE:PS51496 CTD:30813
HOVERGEN:HBG036251 KO:K09335 EMBL:DQ324366 RefSeq:NP_001090191.1
UniGene:Xl.12402 ProteinModelPortal:Q0P031 SMR:Q0P031 GeneID:779073
KEGG:xla:779073 Xenbase:XB-GENE-866467 Uniprot:Q0P031
Length = 344
Score = 131 (51.2 bits), Expect = 2.9e-05, P = 2.9e-05
Identities = 31/84 (36%), Positives = 46/84 (54%)
Query: 69 ESRSGSDNVEGASGDDQEANEDGPPRKKKYHR--HTPHQIQELESFFKECPHPDEKQRSE 126
E+ S D++ G +D +A+ RKK+ HR T HQ+ ELE F E +PD R
Sbjct: 124 ENISDDDSILGDK-NDLKASSAQSKRKKRRHRTVFTAHQLDELEKSFNEAHYPDVYAREM 182
Query: 127 LSRRLGLESKQIKFWFQNRRTQMK 150
L+ + L +I+ WFQNRR + +
Sbjct: 183 LALKTELPEDRIQVWFQNRRAKWR 206
>UNIPROTKB|O76762 [details] [associations]
symbol:abd-A "Homeobox protein abdominal-A homolog"
species:7165 "Anopheles gambiae" [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=ISS]
[GO:0009952 "anterior/posterior pattern specification"
evidence=ISS] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0009952
GO:GO:0043565 GO:GO:0003700 eggNOG:NOG328968 OrthoDB:EOG4F7M1W
Gene3D:1.10.10.60 InterPro:IPR022132 InterPro:IPR020479
Pfam:PF12407 PRINTS:PR00024 SUPFAM:SSF46689 EMBL:AF080566
EMBL:AAAB01008850 RefSeq:XP_311627.4 HSSP:P02833
ProteinModelPortal:O76762 SMR:O76762 EnsemblMetazoa:AGAP004662-RA
GeneID:1272718 KEGG:aga:AgaP_AGAP004662 VectorBase:AGAP004662
CTD:1272718 HOGENOM:HOG000231181 InParanoid:O76762 Uniprot:O76762
Length = 308
Score = 130 (50.8 bits), Expect = 2.9e-05, P = 2.9e-05
Identities = 34/100 (34%), Positives = 54/100 (54%)
Query: 87 ANEDGPPRKKKYHRHTPHQIQELESFFKECPHPDEKQRSELSRRLGLESKQIKFWFQNRR 146
A +G PR++ +T Q ELE F + ++R E++ L L +QIK WFQNRR
Sbjct: 131 AGPNGCPRRRGRQTYTRFQTLELEKEFHFNHYLTRRRRIEIAHALCLTERQIKIWFQNRR 190
Query: 147 TQMKTQMERHENIIL-----RQEHDKLRAENEMLKDAMKN 181
++K ++ + I R+E DK++ NE LK A ++
Sbjct: 191 MKLKKELRAVKEINEQARREREEQDKMK--NESLKSAQQH 228
>UNIPROTKB|F1NNJ9 [details] [associations]
symbol:NKX6-2 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0010454 "negative regulation of cell fate
commitment" evidence=IEA] [GO:0010455 "positive regulation of cell
fate commitment" evidence=IEA] [GO:0021912 "regulation of
transcription from RNA polymerase II promoter involved in spinal
cord motor neuron fate specification" evidence=IEA] [GO:0021913
"regulation of transcription from RNA polymerase II promoter
involved in ventral spinal cord interneuron specification"
evidence=IEA] [GO:0022010 "central nervous system myelination"
evidence=IEA] [GO:0031018 "endocrine pancreas development"
evidence=IEA] [GO:0045686 "negative regulation of glial cell
differentiation" evidence=IEA] [GO:0045687 "positive regulation of
glial cell differentiation" evidence=IEA] [GO:0050885
"neuromuscular process controlling balance" evidence=IEA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0030154
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0000122 GO:GO:0000976
GeneTree:ENSGT00680000099625 GO:GO:0010455 GO:GO:0010454 CTD:84504
KO:K09350 OMA:GPAGFKA EMBL:AADN02047157 EMBL:AADN02047158
IPI:IPI00604205 RefSeq:NP_001186477.1 UniGene:Gga.2725
Ensembl:ENSGALT00000017097 GeneID:395591 KEGG:gga:395591
NextBio:20815664 Uniprot:F1NNJ9
Length = 278
Score = 129 (50.5 bits), Expect = 3.0e-05, P = 3.0e-05
Identities = 38/112 (33%), Positives = 59/112 (52%)
Query: 88 NEDGPPRKKKYHRHT--PHQIQELESFFKECPHPDEKQRSELSRRLGLESKQIKFWFQNR 145
++DG KKK+ R T QI LE F++ + +R+ L+ LG+ Q+K WFQNR
Sbjct: 146 DKDG---KKKHSRPTFSGQQIFALEKTFEQTKYLAGPERARLAYSLGMTESQVKVWFQNR 202
Query: 146 RTQMKTQMERH--ENIILRQEHDKLRAENEMLKDAMKNPTCNNCGGPAVPGS 195
RT+ + +RH E +++HD +E E LK++ N + P P S
Sbjct: 203 RTKWR---KRHAAEMASAKKKHD---SETEKLKESSDNEDDDEYNKPLDPNS 248
>UNIPROTKB|F1P452 [details] [associations]
symbol:PITX1 "Pituitary homeobox 1" species:9031 "Gallus
gallus" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0000988 "protein binding transcription
factor activity" evidence=IEA] [GO:0005667 "transcription factor
complex" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0014707 "branchiomeric
skeletal muscle development" evidence=IEA] [GO:0021983 "pituitary
gland development" evidence=IEA] [GO:0035116 "embryonic hindlimb
morphogenesis" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0048625 "myoblast cell fate commitment" evidence=IEA]
[GO:0051216 "cartilage development" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR016233
InterPro:IPR017970 Pfam:PF00046 PIRSF:PIRSF000563 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0007275 GO:GO:0005737
GO:GO:0005730 GO:GO:0043565 GO:GO:0045944 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0005667 InterPro:IPR003654
Pfam:PF03826 PROSITE:PS50803 GO:GO:0000988 OMA:CKNSYLP
GeneTree:ENSGT00700000104438 EMBL:AADN02028369 IPI:IPI00820270
Ensembl:ENSGALT00000010289 Uniprot:F1P452
Length = 311
Score = 130 (50.8 bits), Expect = 3.0e-05, P = 3.0e-05
Identities = 32/101 (31%), Positives = 54/101 (53%)
Query: 69 ESRSGSDNV---EGASGDDQ-EANEDGPPRKKKYHRHTPH----QIQELESFFKECPHPD 120
E + G +N+ EG G+ + D P +KKK R H Q+QELE+ F+ +PD
Sbjct: 55 ERKRGKENLTKREGGGGNAAADGAADDPAKKKKQRRQRTHFTSQQLQELEATFQRNRYPD 114
Query: 121 EKQRSELSRRLGLESKQIKFWFQNRRTQMKTQMERHENIIL 161
R E++ L +++ WF+NRR + + + ER++ + L
Sbjct: 115 MSMREEIAVWTNLTEPRVRVWFKNRRAKWRKR-ERNQQMDL 154
>UNIPROTKB|P56673 [details] [associations]
symbol:PITX1 "Pituitary homeobox 1" species:9031 "Gallus
gallus" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR016233
InterPro:IPR017970 Pfam:PF00046 PIRSF:PIRSF000563 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0007275 GO:GO:0005634
GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
SUPFAM:SSF46689 InterPro:IPR003654 Pfam:PF03826 PROSITE:PS50803
EMBL:AF069397 IPI:IPI00589641 UniGene:Gga.962
ProteinModelPortal:P56673 SMR:P56673 STRING:P56673 eggNOG:NOG249113
HOGENOM:HOG000273886 HOVERGEN:HBG068770 InParanoid:P56673
OrthoDB:EOG4R503Q Uniprot:P56673
Length = 311
Score = 130 (50.8 bits), Expect = 3.0e-05, P = 3.0e-05
Identities = 36/113 (31%), Positives = 58/113 (51%)
Query: 53 EQFDPSVVGRIREEEFESRSGSDNVEGASGDDQEANEDGPPRKKKYHRHTPH----QIQE 108
E D V + R E ++R D G++G A D P +KKK R H Q+QE
Sbjct: 47 ESSDTDVPEKERSESRKTRE--DGGAGSAGCTGAA--DDPAKKKKQRRQRTHFTSQQLQE 102
Query: 109 LESFFKECPHPDEKQRSELSRRLGLESKQIKFWFQNRRTQMKTQMERHENIIL 161
LE+ F+ +PD R E++ L +++ WF+NRR + + + ER++ + L
Sbjct: 103 LEATFQRNRYPDMSMREEIAVWTNLTEPRVRVWFKNRRAKWRKR-ERNQQMDL 154
>UNIPROTKB|F1NVB2 [details] [associations]
symbol:TLX3 "T-cell leukemia homeobox protein 3"
species:9031 "Gallus gallus" [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0002087 "regulation of respiratory gaseous
exchange by neurological system process" evidence=IEA] [GO:0007417
"central nervous system development" evidence=IEA] [GO:0007585
"respiratory gaseous exchange" evidence=IEA] [GO:0045665 "negative
regulation of neuron differentiation" evidence=IEA] [GO:0048665
"neuron fate specification" evidence=IEA] [GO:0001764 "neuron
migration" evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104454 EMBL:AADN02035942 IPI:IPI00814284
Ensembl:ENSGALT00000003427 OMA:LAFPIAR ArrayExpress:F1NVB2
Uniprot:F1NVB2
Length = 136
Score = 110 (43.8 bits), Expect = 3.1e-05, P = 3.1e-05
Identities = 33/106 (31%), Positives = 52/106 (49%)
Query: 88 NEDGPPRKKKYHRHTPHQIQELESFFKECPHPDEKQRSELSRRLGLESKQIKFWFQNRRT 147
N P RKK + QI ELE F + +R+ L++ L + Q+K WFQNRRT
Sbjct: 5 NRTPPKRKKPRTSFSRVQICELEKRFHRQKYLASAERAALAKSLKMTDAQVKTWFQNRRT 64
Query: 148 QMKTQM------ERHE--NIILRQEHDKLRAE-NEMLKDAMKNPTC 184
+ + Q ER + ++L+ +HD + NE ++ +P C
Sbjct: 65 KWRRQTAEEREAERQQASRLMLQLQHDAFQKSLNESIQP---DPLC 107
>UNIPROTKB|F2Z538 [details] [associations]
symbol:F2Z538 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057 Pfam:PF00046
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
GeneTree:ENSGT00700000104279 EMBL:CU137739
Ensembl:ENSSSCT00000006878 OMA:QSSRVWY Uniprot:F2Z538
Length = 145
Score = 110 (43.8 bits), Expect = 3.1e-05, P = 3.1e-05
Identities = 29/92 (31%), Positives = 50/92 (54%)
Query: 83 DDQEANEDGPPRKKKYHRHT--PHQIQELESFFKECPHPDEKQRSELSRRLGLESKQI-- 138
DDQ +E+ RK++ +R T Q+Q LE F+ +PD R +L+RR+ L ++
Sbjct: 3 DDQLNSEEKKKRKQRRNRTTFNSSQLQALERVFERTHYPDAFVREDLARRVNLTEARVQQ 62
Query: 139 --KFWFQNRRTQMKTQMERHENIILRQEHDKL 168
+ W+QNRR + + R+E +L ++ L
Sbjct: 63 SSRVWYQNRRAKFR----RNERAMLANKNASL 90
>ZFIN|ZDB-GENE-990708-7 [details] [associations]
symbol:otpb "orthopedia homolog b" species:7955
"Danio rerio" [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0000976 "transcription
regulatory region sequence-specific DNA binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0021884 "forebrain
neuron development" evidence=IGI] [GO:0021854 "hypothalamus
development" evidence=IMP] [GO:0030154 "cell differentiation"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
ZFIN:ZDB-GENE-990708-7 GO:GO:0005634 GO:GO:0007399 GO:GO:0030154
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689
InterPro:IPR003654 Pfam:PF03826 PROSITE:PS50803
GeneTree:ENSGT00700000104013 GO:GO:0000976 HSSP:P06601
EMBL:AF071496 EMBL:BC076366 IPI:IPI00512446 IPI:IPI00817208
RefSeq:NP_571175.1 UniGene:Dr.81295 ProteinModelPortal:Q6DGH9
SMR:Q6DGH9 STRING:Q6DGH9 Ensembl:ENSDART00000081249
Ensembl:ENSDART00000134606 GeneID:30316 KEGG:dre:30316 CTD:30316
eggNOG:NOG256838 HOVERGEN:HBG001617 InParanoid:Q6DGH9
OrthoDB:EOG4FXR8D NextBio:20806755 ArrayExpress:Q6DGH9 Bgee:Q6DGH9
Uniprot:Q6DGH9
Length = 315
Score = 130 (50.8 bits), Expect = 3.1e-05, P = 3.1e-05
Identities = 29/71 (40%), Positives = 42/71 (59%)
Query: 85 QEANEDGPPR---KKKYHR--HTPHQIQELESFFKECPHPDEKQRSELSRRLGLESKQIK 139
Q +N+ G + K+K HR TP Q+ ELE F + +PD R EL+ R+GL +++
Sbjct: 85 QNSNQTGGQQNQQKQKRHRTRFTPAQLNELERSFAKTHYPDIFMREELALRIGLTESRVQ 144
Query: 140 FWFQNRRTQMK 150
WFQNRR + K
Sbjct: 145 VWFQNRRAKWK 155
>UNIPROTKB|P29552 [details] [associations]
symbol:abd-A "Homeobox protein abdominal-A homolog"
species:7159 "Aedes aegypti" [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=ISS]
[GO:0009952 "anterior/posterior pattern specification"
evidence=ISS] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0009952
GO:GO:0043565 GO:GO:0003700 EMBL:CH477608 EMBL:X67132
RefSeq:XP_001660313.1 ProteinModelPortal:P29552 SMR:P29552
EnsemblMetazoa:AAEL009742-RA GeneID:5572355
KEGG:aag:AaeL_AAEL009742 VectorBase:AAEL009742 eggNOG:NOG328968
InParanoid:P29552 OrthoDB:EOG4F7M1W PhylomeDB:P29552
Gene3D:1.10.10.60 InterPro:IPR022132 InterPro:IPR020479
Pfam:PF12407 PRINTS:PR00024 SUPFAM:SSF46689 Uniprot:P29552
Length = 239
Score = 127 (49.8 bits), Expect = 3.1e-05, P = 3.1e-05
Identities = 33/100 (33%), Positives = 54/100 (54%)
Query: 87 ANEDGPPRKKKYHRHTPHQIQELESFFKECPHPDEKQRSELSRRLGLESKQIKFWFQNRR 146
A +G PR++ +T Q ELE F + ++R E++ L L +QIK WFQNRR
Sbjct: 14 AGPNGCPRRRGRQTYTRFQTLELEKEFHFNHYLTRRRRIEIAHALCLTERQIKIWFQNRR 73
Query: 147 TQMKTQMERHENIIL-----RQEHDKLRAENEMLKDAMKN 181
++K ++ + I R+E DK++ N+ LK A ++
Sbjct: 74 MKLKKELRAVKEINEQARREREEQDKMK--NDSLKSAQQH 111
>MGI|MGI:96204 [details] [associations]
symbol:Hoxd12 "homeobox D12" species:10090 "Mus musculus"
[GO:0001501 "skeletal system development" evidence=IMP] [GO:0003677
"DNA binding" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005667 "transcription factor complex" evidence=IDA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0007389 "pattern specification process"
evidence=IGI] [GO:0042733 "embryonic digit morphogenesis"
evidence=IGI] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 MGI:MGI:96204 GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 EMBL:CH466519 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0005667 GO:GO:0001501
GO:GO:0007389 GO:GO:0042733 GeneTree:ENSGT00700000104263
HOGENOM:HOG000231177 HOVERGEN:HBG052050 KO:K09297 CTD:3238
eggNOG:NOG241833 OMA:PDGLPWG OrthoDB:EOG43N7DG EMBL:X58849
EMBL:AK031206 EMBL:AL928644 EMBL:BC145656 IPI:IPI00136959
PIR:S16317 RefSeq:NP_032300.2 UniGene:Mm.57124
ProteinModelPortal:P23812 SMR:P23812 IntAct:P23812 STRING:P23812
PhosphoSite:P23812 PRIDE:P23812 Ensembl:ENSMUST00000001878
GeneID:15432 KEGG:mmu:15432 UCSC:uc008kdv.1 InParanoid:Q8BSN0
NextBio:288198 Bgee:P23812 CleanEx:MM_HOXD12 Genevestigator:P23812
GermOnline:ENSMUSG00000001823 Uniprot:P23812
Length = 268
Score = 128 (50.1 bits), Expect = 3.5e-05, P = 3.5e-05
Identities = 29/71 (40%), Positives = 42/71 (59%)
Query: 92 PPR-KKKYHRHTPHQIQELESFFKECPHPDEKQRSELSRRLGLESKQIKFWFQNRRTQMK 150
P R +KK +T QI ELE+ F + ++R ELS RL L +Q+K WFQNRR + K
Sbjct: 197 PGRARKKRKPYTKQQIAELENEFLVNEFINRQKRKELSNRLNLSDQQVKIWFQNRRMKKK 256
Query: 151 TQMERHENIIL 161
++R + + L
Sbjct: 257 RVVQREQALAL 267
>ZFIN|ZDB-GENE-070216-1 [details] [associations]
symbol:otpa "orthopedia homolog a" species:7955
"Danio rerio" [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0000976
"transcription regulatory region sequence-specific DNA binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0021884 "forebrain neuron development"
evidence=IGI;IMP] [GO:0007632 "visual behavior" evidence=IMP]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 ZFIN:ZDB-GENE-070216-1 GO:GO:0005634
GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR003654
Pfam:PF03826 PROSITE:PS50803 GeneTree:ENSGT00700000104013
GO:GO:0000976 GO:GO:0021884 eggNOG:NOG256838 HOVERGEN:HBG001617
OrthoDB:EOG4FXR8D HOGENOM:HOG000039976 OMA:RWATAGM EMBL:CU459136
EMBL:BC162329 EMBL:BC162331 IPI:IPI00484790 RefSeq:NP_001122175.1
UniGene:Dr.87162 STRING:B3DGA5 Ensembl:ENSDART00000027268
GeneID:560759 KEGG:dre:560759 CTD:560759 NextBio:20883602
Uniprot:B3DGA5
Length = 332
Score = 130 (50.8 bits), Expect = 3.5e-05, P = 3.5e-05
Identities = 25/66 (37%), Positives = 39/66 (59%)
Query: 85 QEANEDGPPRKKKYHRHTPHQIQELESFFKECPHPDEKQRSELSRRLGLESKQIKFWFQN 144
Q +++ +K+ R TP Q+ ELE F + +PD R EL+ R+GL +++ WFQN
Sbjct: 105 QSSSQQSQKQKRHRTRFTPAQLNELERSFAKTHYPDIFMREELALRIGLTESRVQVWFQN 164
Query: 145 RRTQMK 150
RR + K
Sbjct: 165 RRAKWK 170
>MGI|MGI:103219 [details] [associations]
symbol:Meox2 "mesenchyme homeobox 2" species:10090 "Mus
musculus" [GO:0001525 "angiogenesis" evidence=IMP] [GO:0001757
"somite specification" evidence=IGI] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0007519 "skeletal muscle tissue development" evidence=IMP]
[GO:0043565 "sequence-specific DNA binding" evidence=ISO]
[GO:0060021 "palate development" evidence=IMP] [GO:0060173 "limb
development" evidence=IMP] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 MGI:MGI:103219 GO:GO:0005737 GO:GO:0016607
GO:GO:0043565 GO:GO:0003700 GO:GO:0001525 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0060021
GO:GO:0060173 eggNOG:NOG250192 GO:GO:0007519 GO:GO:0001757
GeneTree:ENSGT00660000095141 HOGENOM:HOG000230987
HOVERGEN:HBG052456 KO:K09322 CTD:4223 OMA:DHTLFGC OrthoDB:EOG4PZJ7H
EMBL:Z16406 EMBL:AK028352 EMBL:AK031152 EMBL:AK142690 EMBL:S79168
IPI:IPI00108444 PIR:B49122 RefSeq:NP_032610.1 UniGene:Mm.341398
ProteinModelPortal:P32443 SMR:P32443 STRING:P32443
PhosphoSite:P32443 PRIDE:P32443 Ensembl:ENSMUST00000041183
GeneID:17286 KEGG:mmu:17286 UCSC:uc007nkf.1 InParanoid:P32443
NextBio:291796 Bgee:P32443 CleanEx:MM_MEOX2 Genevestigator:P32443
GermOnline:ENSMUSG00000036144 Uniprot:P32443
Length = 303
Score = 129 (50.5 bits), Expect = 3.7e-05, P = 3.7e-05
Identities = 39/116 (33%), Positives = 55/116 (47%)
Query: 41 NAMDAGEMGLIGEQFDPSVVGR--IREEEFESRSGSDNVEGASGDDQEANE----DGPPR 94
N+ G G P GR + + E RSGS + S D QE N + PR
Sbjct: 129 NSSSLGSSTPTGAACAPGDYGRQALSPADVEKRSGSKR-KSDSSDSQEGNYKSEVNSKPR 187
Query: 95 KKKYHRHTPHQIQELESFFKECPHPDEKQRSELSRRLGLESKQIKFWFQNRRTQMK 150
K++ T QI+ELE+ F + +R E++ L L +Q+K WFQNRR + K
Sbjct: 188 KERT-AFTKEQIRELEAEFAHHNYLTRLRRYEIAVNLDLTERQVKVWFQNRRMKWK 242
>UNIPROTKB|Q9Y2V3 [details] [associations]
symbol:RAX "Retinal homeobox protein Rx" species:9606 "Homo
sapiens" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0007389 "pattern specification process"
evidence=IEA] [GO:0021854 "hypothalamus development" evidence=IEA]
[GO:0043010 "camera-type eye development" evidence=IEA] [GO:0060173
"limb development" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0007601 "visual perception" evidence=TAS]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0007601 GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0043010
HOGENOM:HOG000231518 InterPro:IPR003654 Pfam:PF03826
PROSITE:PS50803 GO:GO:0007389 GO:GO:0060173 eggNOG:NOG261733
GO:GO:0021854 Orphanet:2542 EMBL:AC067859 CleanEx:HS_RAX
HOVERGEN:HBG021349 OrthoDB:EOG4V4387 CTD:30062 KO:K09332
EMBL:AF115392 IPI:IPI00021025 RefSeq:NP_038463.2 UniGene:Hs.278957
ProteinModelPortal:Q9Y2V3 SMR:Q9Y2V3 STRING:Q9Y2V3
PhosphoSite:Q9Y2V3 DMDM:296452886 PaxDb:Q9Y2V3 PRIDE:Q9Y2V3
DNASU:30062 Ensembl:ENST00000334889 GeneID:30062 KEGG:hsa:30062
UCSC:uc002lhx.3 GeneCards:GC18M056909 H-InvDB:HIX0202674
HGNC:HGNC:18662 MIM:601881 MIM:611038 neXtProt:NX_Q9Y2V3
PharmGKB:PA38626 InParanoid:Q9Y2V3 OMA:CGPGFGD PhylomeDB:Q9Y2V3
ChiTaRS:RAX GenomeRNAi:30062 NextBio:52852 ArrayExpress:Q9Y2V3
Bgee:Q9Y2V3 Genevestigator:Q9Y2V3 GermOnline:ENSG00000134438
Uniprot:Q9Y2V3
Length = 346
Score = 130 (50.8 bits), Expect = 3.8e-05, P = 3.8e-05
Identities = 34/117 (29%), Positives = 63/117 (53%)
Query: 80 ASGDDQEANEDGPPRKKKYHR--HTPHQIQELESFFKECPHPDEKQRSELSRRLGLESKQ 137
A+G+ + + E+ P +K + +R T +Q+ ELE F++ +PD R EL+ ++ L +
Sbjct: 120 ATGEAKLSEEEQPKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAGKVNLPEVR 179
Query: 138 IKFWFQNRRTQMKTQMERHENIILRQEHDKLRAENEMLKDAMKNPTC---NNCGGPA 191
++ WFQNRR + + Q E+ E ++ + L + + A +P + GGPA
Sbjct: 180 VQVWFQNRRAKWRRQ-EKLEVSSMKLQDSPLLSFSRSPPSATLSPLGAGPGSGGGPA 235
>RGD|1309797 [details] [associations]
symbol:Hoxd12 "homeo box D12" species:10116 "Rattus norvegicus"
[GO:0001501 "skeletal system development" evidence=IEA;ISO]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0005667 "transcription factor complex"
evidence=IEA;ISO] [GO:0007389 "pattern specification process"
evidence=IEA;ISO] [GO:0042733 "embryonic digit morphogenesis"
evidence=IEA;ISO] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 RGD:1309797 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0005667 GO:GO:0001501 GO:GO:0007389 GO:GO:0042733 OMA:PDGLPWG
OrthoDB:EOG43N7DG IPI:IPI00368581 Ensembl:ENSRNOT00000002154
Uniprot:D4ACD1
Length = 278
Score = 128 (50.1 bits), Expect = 3.8e-05, P = 3.8e-05
Identities = 29/71 (40%), Positives = 42/71 (59%)
Query: 92 PPR-KKKYHRHTPHQIQELESFFKECPHPDEKQRSELSRRLGLESKQIKFWFQNRRTQMK 150
P R +KK +T QI ELE+ F + ++R ELS RL L +Q+K WFQNRR + K
Sbjct: 207 PGRARKKRKPYTKQQIAELENEFLVNEFINRQKRKELSNRLNLSDQQVKIWFQNRRMKKK 266
Query: 151 TQMERHENIIL 161
++R + + L
Sbjct: 267 RVVQREQALAL 277
>UNIPROTKB|H0YJC8 [details] [associations]
symbol:PITX1 "Pituitary homeobox 1" species:9606 "Homo
sapiens" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 EMBL:AC008406
HGNC:HGNC:9004 ChiTaRS:PITX1 Ensembl:ENST00000503586 Uniprot:H0YJC8
Length = 208
Score = 124 (48.7 bits), Expect = 3.8e-05, P = 3.8e-05
Identities = 31/102 (30%), Positives = 52/102 (50%)
Query: 64 REEEFESRSGSDNVEGASGDDQEANEDGPPRKKKYHRHTPH----QIQELESFFKECPHP 119
+E E + D+ G +G D P +KKK R H Q+QELE+ F+ +P
Sbjct: 99 KERGGEPKGPEDSGAGGTGC---GGADDPAKKKKQRRQRTHFTSQQLQELEATFQRNRYP 155
Query: 120 DEKQRSELSRRLGLESKQIKFWFQNRRTQMKTQMERHENIIL 161
D R E++ L +++ WF+NRR + + + ER++ + L
Sbjct: 156 DMSMREEIAVWTNLTEPRVRVWFKNRRAKWRKR-ERNQQLDL 196
>ZFIN|ZDB-GENE-070626-1 [details] [associations]
symbol:nkx6.2 "NK6 transcription factor related,
locus 2" species:7955 "Danio rerio" [GO:0043565 "sequence-specific
DNA binding" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0000976 "transcription
regulatory region sequence-specific DNA binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003310 "pancreatic A
cell differentiation" evidence=IGI;IMP] [GO:0003309 "type B
pancreatic cell differentiation" evidence=IGI;IMP] [GO:0031018
"endocrine pancreas development" evidence=IGI;IMP] [GO:0021522
"spinal cord motor neuron differentiation" evidence=IGI;IMP]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 ZFIN:ZDB-GENE-070626-1 GO:GO:0005634
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0021522 GO:GO:0000976 GO:GO:0003310
GO:GO:0003309 eggNOG:NOG265304 HOGENOM:HOG000060127
HOVERGEN:HBG070987 OrthoDB:EOG4JT064 EMBL:DQ416765 IPI:IPI00511922
UniGene:Dr.15365 STRING:A3QRJ9 InParanoid:A3QRJ9 Uniprot:A3QRJ9
Length = 280
Score = 128 (50.1 bits), Expect = 3.9e-05, P = 3.9e-05
Identities = 37/112 (33%), Positives = 59/112 (52%)
Query: 88 NEDGPPRKKKYHRHT--PHQIQELESFFKECPHPDEKQRSELSRRLGLESKQIKFWFQNR 145
++DG KKK+ R T QI LE F++ + +R+ L+ LG+ Q+K WFQNR
Sbjct: 146 DKDG---KKKHSRPTFSGQQIFALEKTFEQTKYLAGPERARLAYSLGMTESQVKVWFQNR 202
Query: 146 RTQMKTQMERH--ENIILRQEHDKLRAENEMLKDAMKNPTCNNCGGPAVPGS 195
RT+ + +RH E +++HD +E E +K++ N + P P S
Sbjct: 203 RTKWR---KRHAAEMATAKKKHD---SETEKMKESSDNDEDDEYNKPLDPNS 248
>UNIPROTKB|F1NE15 [details] [associations]
symbol:LOC100858551 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0005667
"transcription factor complex" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0009952 "anterior/posterior pattern
specification" evidence=IEA] [GO:0009954 "proximal/distal pattern
formation" evidence=IEA] [GO:0030879 "mammary gland development"
evidence=IEA] [GO:0035115 "embryonic forelimb morphogenesis"
evidence=IEA] [GO:0048706 "embryonic skeletal system development"
evidence=IEA] [GO:0060216 "definitive hemopoiesis" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005737 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0005667
GeneTree:ENSGT00700000104054 EMBL:AADN02000988 IPI:IPI00821899
Ensembl:ENSGALT00000018034 Uniprot:F1NE15
Length = 60
Score = 109 (43.4 bits), Expect = 4.0e-05, P = 4.0e-05
Identities = 24/56 (42%), Positives = 33/56 (58%)
Query: 95 KKKYHRHTPHQIQELESFFKECPHPDEKQRSELSRRLGLESKQIKFWFQNRRTQMK 150
+KK +T HQ ELE F + +R E++R L L +Q+K WFQNRR +MK
Sbjct: 2 RKKRCPYTKHQTLELEKEFLFNMYLTRDRRYEVARLLNLTERQVKIWFQNRRMKMK 57
>RGD|621233 [details] [associations]
symbol:Cdx1 "caudal type homeo box 1" species:10116 "Rattus
norvegicus" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;TAS] [GO:0005634 "nucleus" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0007389
"pattern specification process" evidence=ISO] [GO:0009952
"anterior/posterior pattern specification" evidence=IEA;ISO]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA;ISO] [GO:0060349 "bone
morphogenesis" evidence=IEA;ISO] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 RGD:621233 GO:GO:0005634 GO:GO:0009952 GO:GO:0045944
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0000976 GO:GO:0060349 eggNOG:NOG291290
HOGENOM:HOG000115975 HOVERGEN:HBG005302 OrthoDB:EOG42FSK7
EMBL:M91450 IPI:IPI00766495 PIR:S27397 ProteinModelPortal:Q05095
SMR:Q05095 STRING:Q05095 UCSC:RGD:621233 InParanoid:Q05095
ArrayExpress:Q05095 Genevestigator:Q05095
GermOnline:ENSRNOG00000018624 Uniprot:Q05095
Length = 123
Score = 109 (43.4 bits), Expect = 4.0e-05, P = 4.0e-05
Identities = 24/55 (43%), Positives = 33/55 (60%)
Query: 95 KKKYHR-HTPHQIQELESFFKECPHPDEKQRSELSRRLGLESKQIKFWFQNRRTQ 148
K KY +T HQ ELE F + +++SEL+ LGL +Q+K WFQNRR +
Sbjct: 5 KDKYRVVYTDHQRLELEKEFHYSRYITIRRKSELAANLGLTERQVKIWFQNRRAK 59
>UNIPROTKB|Q05095 [details] [associations]
symbol:Cdx1 "Homeobox protein CDX-1" species:10116 "Rattus
norvegicus" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 RGD:621233
GO:GO:0005634 GO:GO:0009952 GO:GO:0045944 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0000976 GO:GO:0060349 eggNOG:NOG291290 HOGENOM:HOG000115975
HOVERGEN:HBG005302 OrthoDB:EOG42FSK7 EMBL:M91450 IPI:IPI00766495
PIR:S27397 ProteinModelPortal:Q05095 SMR:Q05095 STRING:Q05095
UCSC:RGD:621233 InParanoid:Q05095 ArrayExpress:Q05095
Genevestigator:Q05095 GermOnline:ENSRNOG00000018624 Uniprot:Q05095
Length = 123
Score = 109 (43.4 bits), Expect = 4.0e-05, P = 4.0e-05
Identities = 24/55 (43%), Positives = 33/55 (60%)
Query: 95 KKKYHR-HTPHQIQELESFFKECPHPDEKQRSELSRRLGLESKQIKFWFQNRRTQ 148
K KY +T HQ ELE F + +++SEL+ LGL +Q+K WFQNRR +
Sbjct: 5 KDKYRVVYTDHQRLELEKEFHYSRYITIRRKSELAANLGLTERQVKIWFQNRRAK 59
>UNIPROTKB|Q9GLL9 [details] [associations]
symbol:PROP1 "Homeobox protein prophet of Pit-1"
species:9823 "Sus scrofa" [GO:0060126 "somatotropin secreting cell
differentiation" evidence=IEA] [GO:0060070 "canonical Wnt receptor
signaling pathway" evidence=IEA] [GO:0048850 "hypophysis
morphogenesis" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0043066 "negative regulation of apoptotic process"
evidence=IEA] [GO:0021979 "hypothalamus cell differentiation"
evidence=IEA] [GO:0016477 "cell migration" evidence=IEA]
[GO:0009953 "dorsal/ventral pattern formation" evidence=IEA]
[GO:0008022 "protein C-terminus binding" evidence=IEA] [GO:0008013
"beta-catenin binding" evidence=IEA] [GO:0005667 "transcription
factor complex" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0001568 "blood vessel development" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0043066 GO:GO:0016477 GO:GO:0043565
GO:GO:0045944 GO:GO:0003700 GO:GO:0003682 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0005667 GO:GO:0000122 GO:GO:0001568
GO:GO:0009953 GO:GO:0060070 GeneTree:ENSGT00700000104273
GO:GO:0021979 GO:GO:0060126 CTD:5626 HOVERGEN:HBG053691 KO:K09327
GO:GO:0048850 OMA:TCFPHPY EMBL:AF232676 EMBL:AB187272 EMBL:EF188259
RefSeq:NP_001001263.1 UniGene:Ssc.15921 UniGene:Ssc.86965
ProteinModelPortal:Q9GLL9 SMR:Q9GLL9 Ensembl:ENSSSCT00000028015
GeneID:397280 KEGG:ssc:397280 Uniprot:Q9GLL9
Length = 226
Score = 125 (49.1 bits), Expect = 4.3e-05, P = 4.3e-05
Identities = 28/72 (38%), Positives = 41/72 (56%)
Query: 86 EANEDGPPRKKKYHRHT--PHQIQELESFFKECPHPDEKQRSELSRRLGLESKQIKFWFQ 143
+ + G P ++ HR T P Q+++LES F +PD R L+R GL +I+ WFQ
Sbjct: 59 QGGQRGRPHSRRRHRTTFSPAQLEQLESAFGRNQYPDIWAREGLARDTGLSEARIQVWFQ 118
Query: 144 NRRTQMKTQMER 155
NRR + + Q ER
Sbjct: 119 NRRAKQRKQ-ER 129
>UNIPROTKB|B0W1V2 [details] [associations]
symbol:abd-A "Homeobox protein abdominal-A homolog"
species:7176 "Culex quinquefasciatus" [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0009952 "anterior/posterior
pattern specification" evidence=ISS] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
GO:GO:0009952 GO:GO:0043565 GO:GO:0003700 eggNOG:NOG328968
OrthoDB:EOG4F7M1W Gene3D:1.10.10.60 InterPro:IPR022132
InterPro:IPR020479 Pfam:PF12407 PRINTS:PR00024 SUPFAM:SSF46689
EMBL:DS231824 RefSeq:XP_001842686.1 ProteinModelPortal:B0W1V2
SMR:B0W1V2 EnsemblMetazoa:CPIJ001016-RA GeneID:6032019
KEGG:cqu:CpipJ_CPIJ001016 VectorBase:CPIJ001016 OMA:CHGIASP
PhylomeDB:B0W1V2 Uniprot:B0W1V2
Length = 216
Score = 124 (48.7 bits), Expect = 4.6e-05, P = 4.6e-05
Identities = 32/97 (32%), Positives = 53/97 (54%)
Query: 90 DGPPRKKKYHRHTPHQIQELESFFKECPHPDEKQRSELSRRLGLESKQIKFWFQNRRTQM 149
+G PR++ +T Q ELE F + ++R E++ L L +QIK WFQNRR ++
Sbjct: 39 NGCPRRRGRQTYTRFQTLELEKEFHFNHYLTRRRRIEIAHALCLTERQIKIWFQNRRMKL 98
Query: 150 KTQMERHENIIL-----RQEHDKLRAENEMLKDAMKN 181
K ++ + I R+E DK++ N+ LK A ++
Sbjct: 99 KKELRAVKEINEQARREREEQDKMK--NDSLKSAQQH 133
>UNIPROTKB|P23459 [details] [associations]
symbol:HOXD8 "Homeobox protein Hox-D8" species:9031 "Gallus
gallus" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
GO:GO:0007275 GO:GO:0005634 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0000976 HOVERGEN:HBG016849 KO:K09308 EMBL:X57158
IPI:IPI00576774 PIR:I50145 RefSeq:NP_997060.1 UniGene:Gga.3187
ProteinModelPortal:P23459 SMR:P23459 GeneID:396301 KEGG:gga:396301
CTD:3234 NextBio:20816351 Uniprot:P23459
Length = 188
Score = 121 (47.7 bits), Expect = 4.7e-05, P = 4.7e-05
Identities = 28/82 (34%), Positives = 44/82 (53%)
Query: 92 PPRKKKYHRHTPHQIQELESFFKECPHPDEKQRSELSRRLGLESKQIKFWFQNRRTQMKT 151
P R++ ++ Q ELE F P+ K+R E+S LGL +Q+K WFQNRR + K
Sbjct: 93 PGRRRGRQTYSRFQTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWKK 152
Query: 152 QMERHENIILRQEHDKLRAENE 173
+ + + +QE + A+ E
Sbjct: 153 ENNKDKFPASKQEGKEGEAKKE 174
>UNIPROTKB|F1SEJ3 [details] [associations]
symbol:MEOX2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0060173 "limb
development" evidence=IEA] [GO:0060021 "palate development"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0007519 "skeletal muscle tissue development"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0001757
"somite specification" evidence=IEA] [GO:0001525 "angiogenesis"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0005737
GO:GO:0043565 GO:GO:0003700 GO:GO:0001525 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0060021
GO:GO:0060173 GO:GO:0007519 GO:GO:0001757
GeneTree:ENSGT00660000095141 KO:K09322 OMA:DHTLFGC EMBL:FP565218
RefSeq:XP_003482725.1 Ensembl:ENSSSCT00000016732 GeneID:100736898
KEGG:ssc:100736898 Uniprot:F1SEJ3
Length = 303
Score = 128 (50.1 bits), Expect = 4.8e-05, P = 4.8e-05
Identities = 39/116 (33%), Positives = 54/116 (46%)
Query: 41 NAMDAGEMGLIGEQFDPSVVGR--IREEEFESRSGSDNVEGASGDDQEANE----DGPPR 94
N+ G G P GR + E E RSG + S D QE N + PR
Sbjct: 129 NSSSLGSSTPTGAACPPGDYGRQALSPAEAEKRSGGKR-KSDSSDSQEGNYKSEVNSKPR 187
Query: 95 KKKYHRHTPHQIQELESFFKECPHPDEKQRSELSRRLGLESKQIKFWFQNRRTQMK 150
K++ T QI+ELE+ F + +R E++ L L +Q+K WFQNRR + K
Sbjct: 188 KERT-AFTKEQIRELEAEFAHHNYLTRLRRYEIAVNLDLTERQVKVWFQNRRMKWK 242
>TAIR|locus:2059143 [details] [associations]
symbol:HAT9 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;IEA;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0006473 "protein acetylation" evidence=RCA]
InterPro:IPR001356 InterPro:IPR003106 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 Pfam:PF02183 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00340 SMART:SM00389 GO:GO:0005634
EMBL:AC004786 EMBL:AC005617 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
SUPFAM:SSF46689 KO:K09338 HOGENOM:HOG000241612
ProtClustDB:CLSN2683864 EMBL:U09341 EMBL:U09342 EMBL:AJ441253
EMBL:AK229218 IPI:IPI00526618 PIR:A84617 PIR:T52371 PIR:T52372
RefSeq:NP_179865.1 UniGene:At.12844 UniGene:At.67823
ProteinModelPortal:P46603 SMR:P46603 EnsemblPlants:AT2G22800.1
GeneID:816811 KEGG:ath:AT2G22800 GeneFarm:3963 TAIR:At2g22800
eggNOG:NOG323848 InParanoid:P46603 OMA:MHMPAST PhylomeDB:P46603
Genevestigator:P46603 GermOnline:AT2G22800 Uniprot:P46603
Length = 274
Score = 127 (49.8 bits), Expect = 4.8e-05, P = 4.8e-05
Identities = 39/118 (33%), Positives = 59/118 (50%)
Query: 59 VVGRIREEEFESRSGSDNVEGASGDDQEANEDGPPRKKKYHRHTPHQIQELESFFKECPH 118
VV R R+ ES + E D E +E+G +KK R T Q LE FK+
Sbjct: 77 VVKRERDGGEESPEEEEMTERVISDYHE-DEEGISARKKL-RLTKQQSALLEESFKDHST 134
Query: 119 PDEKQRSELSRRLGLESKQIKFWFQNRRTQMKTQMERHENIILRQEHDKLRAENEMLK 176
+ KQ+ L+R+L L +Q++ WFQNRR + K + + L++ + L EN L+
Sbjct: 135 LNPKQKQVLARQLNLRPRQVEVWFQNRRARTKLKQTEVDCEFLKKCCETLADENIRLQ 192
>TAIR|locus:2137599 [details] [associations]
symbol:HAT22 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;IEA;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0009735 "response to cytokinin stimulus"
evidence=IEP] [GO:0006473 "protein acetylation" evidence=RCA]
InterPro:IPR001356 InterPro:IPR003106 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 Pfam:PF02183 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00340 SMART:SM00389 GO:GO:0005634
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0009735 EMBL:AL035709
EMBL:AL161592 GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 KO:K09338 HOGENOM:HOG000241612
EMBL:U09336 EMBL:U09337 EMBL:AJ441254 EMBL:BT002318 EMBL:AY087563
EMBL:M90417 IPI:IPI00522748 PIR:T06026 RefSeq:NP_195493.1
UniGene:At.23912 ProteinModelPortal:P46604 SMR:P46604 IntAct:P46604
EnsemblPlants:AT4G37790.1 GeneID:829935 KEGG:ath:AT4G37790
GeneFarm:3981 TAIR:At4g37790 eggNOG:NOG259949 InParanoid:P46604
OMA:TTERVVC PhylomeDB:P46604 ProtClustDB:CLSN2683864
Genevestigator:P46604 GermOnline:AT4G37790 Uniprot:P46604
Length = 278
Score = 127 (49.8 bits), Expect = 4.9e-05, P = 4.9e-05
Identities = 39/130 (30%), Positives = 63/130 (48%)
Query: 61 GRI-REEEFESRSGSDNVEGAS--------GDDQEANEDGPPRKKKYHRHTPHQIQELES 111
GR+ RE E G + E + DD + +E+G +KK R T Q LE
Sbjct: 83 GRVKREREISGGDGEEEAEETTERVVCSRVSDDHD-DEEGVSARKKL-RLTKQQSALLED 140
Query: 112 FFKECPHPDEKQRSELSRRLGLESKQIKFWFQNRRTQMKTQMERHENIILRQEHDKLRAE 171
FK + KQ+ L+R+L L +Q++ WFQNRR + K + + L++ + L E
Sbjct: 141 NFKLHSTLNPKQKQALARQLNLRPRQVEVWFQNRRARTKLKQTEVDCEFLKKCCETLTDE 200
Query: 172 NEMLKDAMKN 181
N L+ +++
Sbjct: 201 NRRLQKELQD 210
>UNIPROTKB|F1NC59 [details] [associations]
symbol:F1NC59 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0005667
GeneTree:ENSGT00700000104054 OMA:RRYEISQ EMBL:AADN02000989
IPI:IPI00822649 Ensembl:ENSGALT00000037820 Uniprot:F1NC59
Length = 59
Score = 108 (43.1 bits), Expect = 5.1e-05, P = 5.1e-05
Identities = 23/56 (41%), Positives = 34/56 (60%)
Query: 95 KKKYHRHTPHQIQELESFFKECPHPDEKQRSELSRRLGLESKQIKFWFQNRRTQMK 150
+KK +T HQ ELE F + ++R E+SR + L +Q+K WFQNRR ++K
Sbjct: 1 RKKRCPYTKHQTLELEKEFLFNMYLTRERRLEISRTVHLTDRQVKIWFQNRRMKLK 56
>UNIPROTKB|F1NHM4 [details] [associations]
symbol:CDX4 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00530000063388 GO:GO:0000976 EMBL:AADN02013531
EMBL:AADN02013532 IPI:IPI00820756 Ensembl:ENSGALT00000039471
Uniprot:F1NHM4
Length = 60
Score = 108 (43.1 bits), Expect = 5.1e-05, P = 5.1e-05
Identities = 24/55 (43%), Positives = 34/55 (61%)
Query: 95 KKKYHR-HTPHQIQELESFFKECPHPDEKQRSELSRRLGLESKQIKFWFQNRRTQ 148
K+KY +T HQ ELE F + +++SEL+ LGL +Q+K WFQNRR +
Sbjct: 1 KEKYRVVYTDHQRLELEKEFHCNRYITIRRKSELAANLGLSERQVKIWFQNRRAK 55
>UNIPROTKB|F6R243 [details] [associations]
symbol:CDX1 "Homeobox protein CDX-1" species:9031 "Gallus
gallus" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0009952
"anterior/posterior pattern specification" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0060349 "bone
morphogenesis" evidence=IEA] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0000976 EMBL:AADN02028624 IPI:IPI00819151
ProteinModelPortal:F6R243 Ensembl:ENSGALT00000040457 Uniprot:F6R243
Length = 117
Score = 108 (43.1 bits), Expect = 5.1e-05, P = 5.1e-05
Identities = 37/115 (32%), Positives = 53/115 (46%)
Query: 91 GPPRKKKYHR--HTPHQIQELESFFKECPHPDEKQRSELSRRLGLESKQIKFWFQNRRTQ 148
G R K +R +T HQ ELE F + ++++EL+ LGL +Q+K WFQNRR +
Sbjct: 1 GKTRTKDKYRVVYTDHQRLELEKEFHYSRYITIRRKAELAAALGLTERQVKIWFQNRRAK 60
Query: 149 MKTQMERHENIILRQEHDKLRAENEMLKDAM--KNPTCNNCGGPAVPGSVSNYEL 201
ER N Q+ + + A+ P C G A P VS+ L
Sbjct: 61 -----ERKVNKKKLQQQSQPTSTTTPTPPAVGTPGPMGTLCSGSA-PSLVSSSPL 109
>RGD|1309960 [details] [associations]
symbol:Obox5 "oocyte specific homeobox 5" species:10116 "Rattus
norvegicus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 RGD:1309960 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 IPI:IPI00366620
RefSeq:XP_001072735.2 RefSeq:XP_577758.4 PRIDE:D3ZYG1
Ensembl:ENSRNOT00000045660 GeneID:308331 GeneID:502295
KEGG:rno:308331 KEGG:rno:502295 UCSC:RGD:1309960 CTD:252829
CTD:502295 GeneTree:ENSGT00390000000605 OMA:PSADELW
OrthoDB:EOG4V172T NextBio:658610 Uniprot:D3ZYG1
Length = 312
Score = 128 (50.1 bits), Expect = 5.1e-05, P = 5.1e-05
Identities = 34/129 (26%), Positives = 59/129 (45%)
Query: 31 AQFPLSLSIKNAMDAGEMGLIGEQFDPSVVGRIREEEFE-SRSGSDNVEG---ASGDDQE 86
+Q P + A G+ L+ + +RE++ S ++E D
Sbjct: 23 SQLPQEPAWNLAFQMGQSPLVTSRTPMQSSPSVREQKVHWQESQGSSIESRPLVESDKYG 82
Query: 87 ANEDGP--PRKKKYHRHTPHQIQE---LESFFKECPHPDEKQRSELSRRLGLESKQIKFW 141
+ GP PRK + + T + ++ L+ F EC +PD+K EL+ +G+ K+IK W
Sbjct: 83 KKQTGPVAPRKPRMEKRTQYSTKQKSVLQECFAECQYPDQKLCMELASLVGVTEKEIKVW 142
Query: 142 FQNRRTQMK 150
F+N R + K
Sbjct: 143 FKNNRAKCK 151
>UNIPROTKB|F1RZG1 [details] [associations]
symbol:HOXD8 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0048705 "skeletal
system morphogenesis" evidence=IEA] [GO:0009952 "anterior/posterior
pattern specification" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR001356
InterPro:IPR001827 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0009952 GO:GO:0043565
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0000122 GO:GO:0048705
GeneTree:ENSGT00700000104332 OMA:GQEYFHP EMBL:CU570829
Ensembl:ENSSSCT00000017404 Uniprot:F1RZG1
Length = 221
Score = 124 (48.7 bits), Expect = 5.1e-05, P = 5.1e-05
Identities = 30/95 (31%), Positives = 49/95 (51%)
Query: 92 PPRKKKYHRHTPHQIQELESFFKECPHPDEKQRSELSRRLGLESKQIKFWFQNRRTQMKT 151
P R++ ++ Q ELE F P+ K+R E+S L L +Q+K WFQNRR + K
Sbjct: 126 PGRRRGRQTYSRFQTLELEKEFLFNPYLTRKRRIEVSHALALTERQVKIWFQNRRMKWKK 185
Query: 152 QMERHENIILRQEH---DKLRAENEMLKDAMKNPT 183
+ + + + RQE + + E+ +D + PT
Sbjct: 186 ENNKDKFPVSRQEAKDGETKKEAQELEEDRAEGPT 220
>UNIPROTKB|E2RMI2 [details] [associations]
symbol:VSX1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0060040
"retinal bipolar neuron differentiation" evidence=IEA] [GO:0042551
"neuron maturation" evidence=IEA] [GO:0007601 "visual perception"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0007601
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
GeneTree:ENSGT00700000104013 GO:GO:0060040 GO:GO:0042551
InterPro:IPR023339 PROSITE:PS51496 CTD:30813 KO:K09335 OMA:WGSDHLK
EMBL:AAEX03013434 RefSeq:XP_850138.1 ProteinModelPortal:E2RMI2
Ensembl:ENSCAFT00000007019 GeneID:608128 KEGG:cfa:608128
NextBio:20893801 Uniprot:E2RMI2
Length = 363
Score = 129 (50.5 bits), Expect = 5.4e-05, P = 5.4e-05
Identities = 34/102 (33%), Positives = 52/102 (50%)
Query: 57 PSVVGRIREEEFESRSGSDNV-EGASGDDQEANEDGPPRKKKYHR--HTPHQIQELESFF 113
P+ + + E S D+ E SG +A+ RKK+ HR T HQ++ELE F
Sbjct: 125 PATLSSQKRSESVLTSDEDSPSEDRSG--LKASPSSGKRKKRRHRTVFTAHQLEELEKAF 182
Query: 114 KECPHPDEKQRSELSRRLGLESKQIKFWFQNRRTQMKTQMER 155
E +PD R L+ + L +I+ WFQNRR + + + +R
Sbjct: 183 SEAHYPDVYAREMLAVKTELPEDRIQVWFQNRRAKWRKREKR 224
>UNIPROTKB|Q7YRX0 [details] [associations]
symbol:RAX2 "Retina and anterior neural fold homeobox
protein 2" species:9913 "Bos taurus" [GO:0005634 "nucleus"
evidence=IEA] [GO:0050896 "response to stimulus" evidence=IEA]
[GO:0007601 "visual perception" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0007601 GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 GO:GO:0050896 Gene3D:1.10.10.60
SUPFAM:SSF46689 HOGENOM:HOG000231518 HSSP:P06601
GeneTree:ENSGT00700000104256 HOVERGEN:HBG021349 EMBL:AY211276
IPI:IPI00706984 RefSeq:NP_872594.1 UniGene:Bt.87576
ProteinModelPortal:Q7YRX0 SMR:Q7YRX0 STRING:Q7YRX0
Ensembl:ENSBTAT00000012858 GeneID:359713 KEGG:bta:359713 CTD:84839
eggNOG:NOG248147 InParanoid:Q7YRX0 KO:K09333 OMA:SFGPHAF
OrthoDB:EOG4V4387 NextBio:20812744 Uniprot:Q7YRX0
Length = 184
Score = 120 (47.3 bits), Expect = 5.5e-05, P = 5.5e-05
Identities = 27/81 (33%), Positives = 45/81 (55%)
Query: 80 ASGDDQEANEDGPPRKKKYHR--HTPHQIQELESFFKECPHPDEKQRSELSRRLGLESKQ 137
A G E+ P +K + +R T +Q+ +LE F+ +PD R EL+ ++ L +
Sbjct: 11 AEGGGPGPGEEAPKKKHRRNRTTFTTYQLHQLERAFEASHYPDVYSREELAAKVHLPEVR 70
Query: 138 IKFWFQNRRTQMKTQMERHEN 158
++ WFQNRR + + Q ER E+
Sbjct: 71 VQVWFQNRRAKWRRQ-ERLES 90
>UNIPROTKB|Q9PVY0 [details] [associations]
symbol:RX1 "Retinal homeobox protein Rx1" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0007275 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689
HOGENOM:HOG000231518 InterPro:IPR003654 Pfam:PF03826
PROSITE:PS50803 eggNOG:NOG261733 GeneTree:ENSGT00700000104256
HOVERGEN:HBG021349 OrthoDB:EOG4V4387 EMBL:AB015750 EMBL:AF420601
IPI:IPI00599352 RefSeq:NP_989435.2 UniGene:Gga.48437
UniGene:Gga.55791 ProteinModelPortal:Q9PVY0 SMR:Q9PVY0 PRIDE:Q9PVY0
Ensembl:ENSGALT00000032299 GeneID:373893 KEGG:gga:373893 CTD:30062
InParanoid:Q9PVY0 KO:K09332 NextBio:20813425 ArrayExpress:Q9PVY0
Uniprot:Q9PVY0
Length = 228
Score = 124 (48.7 bits), Expect = 5.8e-05, P = 5.8e-05
Identities = 30/102 (29%), Positives = 53/102 (51%)
Query: 87 ANEDGPPRKKKYHR--HTPHQIQELESFFKECPHPDEKQRSELSRRLGLESKQIKFWFQN 144
A E+ P +K + +R T +Q+ ELE F++ +PD R EL+ ++ L +++ WFQN
Sbjct: 27 AEEEQPKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAMKVNLPEVRVQVWFQN 86
Query: 145 RRTQMKTQMERHENIILRQEHDKLRAENEMLKDAMKNPTCNN 186
RR + + Q E+ E ++ + + N A P N+
Sbjct: 87 RRAKWRRQ-EKMEASSMKLHDTPMLSFNRPPMTANVGPMSNS 127
>UNIPROTKB|O93385 [details] [associations]
symbol:PITX2 "Pituitary homeobox 2" species:9031 "Gallus
gallus" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0001078 "RNA
polymerase II core promoter proximal region sequence-specific DNA
binding transcription factor activity involved in negative
regulation of transcription" evidence=IEA] [GO:0001102 "RNA
polymerase II activating transcription factor binding"
evidence=IEA] [GO:0001105 "RNA polymerase II transcription
coactivator activity" evidence=IEA] [GO:0001191 "RNA polymerase II
transcription factor binding transcription factor activity involved
in negative regulation of transcription" evidence=IEA] [GO:0001569
"patterning of blood vessels" evidence=IEA] [GO:0001570
"vasculogenesis" evidence=IEA] [GO:0001701 "in utero embryonic
development" evidence=IEA] [GO:0001764 "neuron migration"
evidence=IEA] [GO:0002074 "extraocular skeletal muscle development"
evidence=IEA] [GO:0003171 "atrioventricular valve development"
evidence=IEA] [GO:0003253 "cardiac neural crest cell migration
involved in outflow tract morphogenesis" evidence=IEA] [GO:0003350
"pulmonary myocardium development" evidence=IEA] [GO:0005667
"transcription factor complex" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0007520 "myoblast fusion"
evidence=IEA] [GO:0016055 "Wnt receptor signaling pathway"
evidence=IEA] [GO:0021763 "subthalamic nucleus development"
evidence=IEA] [GO:0021855 "hypothalamus cell migration"
evidence=IEA] [GO:0021983 "pituitary gland development"
evidence=IEA] [GO:0030334 "regulation of cell migration"
evidence=IEA] [GO:0031076 "embryonic camera-type eye development"
evidence=IEA] [GO:0031490 "chromatin DNA binding" evidence=IEA]
[GO:0035116 "embryonic hindlimb morphogenesis" evidence=IEA]
[GO:0035886 "vascular smooth muscle cell differentiation"
evidence=IEA] [GO:0035993 "deltoid tuberosity development"
evidence=IEA] [GO:0042476 "odontogenesis" evidence=IEA] [GO:0042803
"protein homodimerization activity" evidence=IEA] [GO:0043388
"positive regulation of DNA binding" evidence=IEA] [GO:0048536
"spleen development" evidence=IEA] [GO:0048557 "embryonic digestive
tract morphogenesis" evidence=IEA] [GO:0051219 "phosphoprotein
binding" evidence=IEA] [GO:0055009 "atrial cardiac muscle tissue
morphogenesis" evidence=IEA] [GO:0055015 "ventricular cardiac
muscle cell development" evidence=IEA] [GO:0060412 "ventricular
septum morphogenesis" evidence=IEA] [GO:0060460 "left lung
morphogenesis" evidence=IEA] [GO:0060577 "pulmonary vein
morphogenesis" evidence=IEA] [GO:0060578 "superior vena cava
morphogenesis" evidence=IEA] [GO:0061031 "endodermal digestive
tract morphogenesis" evidence=IEA] [GO:0061072 "iris morphogenesis"
evidence=IEA] [GO:0061325 "cell proliferation involved in outflow
tract morphogenesis" evidence=IEA] [GO:0070986 "left/right axis
specification" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0061184 "positive regulation of dermatome development"
evidence=IDA] [GO:0045663 "positive regulation of myoblast
differentiation" evidence=IDA] [GO:0030326 "embryonic limb
morphogenesis" evidence=IDA] [GO:2000287 "positive regulation of
myotome development" evidence=IDA] [GO:2000288 "positive regulation
of myoblast proliferation" evidence=IDA] [GO:0007368 "determination
of left/right symmetry" evidence=IEP] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR016233 InterPro:IPR017970
Pfam:PF00046 PIRSF:PIRSF000563 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005737 GO:GO:0016055 GO:GO:0001078
GO:GO:0045944 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0005667
GO:GO:0030334 GO:GO:0030326 GO:GO:0007368 InterPro:IPR003654
Pfam:PF03826 PROSITE:PS50803 GO:GO:0000976 GO:GO:0001105
GO:GO:0031490 GO:GO:0001191 GO:GO:0045663 GO:GO:0043388
GO:GO:2000288 eggNOG:NOG249113 HOVERGEN:HBG068770 EMBL:AF076640
EMBL:AF077092 EMBL:AF063935 IPI:IPI00573554 IPI:IPI00602044
PIR:JW0097 RefSeq:NP_990341.1 UniGene:Gga.3398
ProteinModelPortal:O93385 SMR:O93385 STRING:O93385 GeneID:395862
KEGG:gga:395862 CTD:5308 KO:K04686 NextBio:20815929 GO:GO:0061184
GO:GO:2000287 Uniprot:O93385
Length = 333
Score = 128 (50.1 bits), Expect = 5.9e-05, P = 5.9e-05
Identities = 39/155 (25%), Positives = 73/155 (47%)
Query: 8 VGMGSRVVAEIFPHCHSMASGAIAQFPLSLSIKNAMDAGEMGLIGEQFDPSV-VGRIREE 66
+G G+ + P S +S Q P +L++ A+ G+ E + V I +
Sbjct: 13 LGAGNNKLCSSSPSSSSSSSSCHHQQP-ALAMATALAPGQARSSLEAAKHRLEVHTISDT 71
Query: 67 EFESRSGSDNVEGASGDDQEANEDGPPRKKKYHRHTPH----QIQELESFFKECPHPDEK 122
S ++ + G ++A + P +KK+ R H Q+QELE+ F+ +PD
Sbjct: 72 S--SPEAAEKEKSQQGKSEDAGPEDPSKKKRQRRQRTHFTSQQLQELEATFQRNRYPDMS 129
Query: 123 QRSELSRRLGLESKQIKFWFQNRRTQMKTQMERHE 157
R E++ L +++ WF+NRR + + + ER++
Sbjct: 130 TREEIAVWTNLTEARVRVWFKNRRAKWRKR-ERNQ 163
>UNIPROTKB|F1NPM5 [details] [associations]
symbol:GSC "Homeobox protein goosecoid" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0005667 "transcription factor complex"
evidence=IEA] [GO:0021904 "dorsal/ventral neural tube patterning"
evidence=IEA] [GO:0023019 "signal transduction involved in
regulation of gene expression" evidence=IEA] [GO:0030178 "negative
regulation of Wnt receptor signaling pathway" evidence=IEA]
[GO:0030900 "forebrain development" evidence=IEA] [GO:0042474
"middle ear morphogenesis" evidence=IEA] [GO:0048644 "muscle organ
morphogenesis" evidence=IEA] [GO:0048704 "embryonic skeletal system
morphogenesis" evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0005667 GO:GO:0000122 GO:GO:0030178
GO:GO:0023019 IPI:IPI00594603 OMA:PVGPSCC
GeneTree:ENSGT00700000104273 EMBL:AADN02003672
Ensembl:ENSGALT00000017878 Uniprot:F1NPM5
Length = 246
Score = 125 (49.1 bits), Expect = 5.9e-05, P = 5.9e-05
Identities = 23/61 (37%), Positives = 40/61 (65%)
Query: 94 RKKKYHR--HTPHQIQELESFFKECPHPDEKQRSELSRRLGLESKQIKFWFQNRRTQMKT 151
R+K+ HR T Q++ LE+ F+E +PD R +L+RR+ L ++++ WF+NRR + +
Sbjct: 149 RRKRRHRTIFTDEQLEALENLFQETKYPDVGTREQLARRVHLREEKVEVWFKNRRAKWRR 208
Query: 152 Q 152
Q
Sbjct: 209 Q 209
>UNIPROTKB|F1PF43 [details] [associations]
symbol:VAX2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0060041
"retina development in camera-type eye" evidence=IEA] [GO:0048048
"embryonic eye morphogenesis" evidence=IEA] [GO:0031490 "chromatin
DNA binding" evidence=IEA] [GO:0030900 "forebrain development"
evidence=IEA] [GO:0009950 "dorsal/ventral axis specification"
evidence=IEA] [GO:0007409 "axonogenesis" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0000976 "transcription regulatory
region sequence-specific DNA binding" evidence=IEA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0005737
GO:GO:0030900 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0000122 GO:GO:0060041
GO:GO:0007409 GO:GO:0048048 GO:GO:0000976 GO:GO:0031490
GO:GO:0009950 GeneTree:ENSGT00680000099870 OMA:LGEADHC
EMBL:AAEX03007653 EMBL:AAEX03007652 Ensembl:ENSCAFT00000005524
Uniprot:F1PF43
Length = 247
Score = 125 (49.1 bits), Expect = 5.9e-05, P = 5.9e-05
Identities = 26/66 (39%), Positives = 37/66 (56%)
Query: 90 DGPPRKKKYHRHTPHQIQELESFFKECPHPDEKQRSELSRRLGLESKQIKFWFQNRRTQM 149
D P R + T Q+ LE F+ C + ++R+EL+R+L L Q+K WFQNRRT+
Sbjct: 57 DRPKRTRT--SFTAEQLYRLEMEFQRCQYVVGRERTELARQLNLSETQVKVWFQNRRTKQ 114
Query: 150 KTQMER 155
K R
Sbjct: 115 KKDQSR 120
>UNIPROTKB|E2RDU9 [details] [associations]
symbol:MEOX2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0060173
"limb development" evidence=IEA] [GO:0060021 "palate development"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0007519 "skeletal muscle tissue development"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0001757
"somite specification" evidence=IEA] [GO:0001525 "angiogenesis"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0005737
GO:GO:0043565 GO:GO:0003700 GO:GO:0001525 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0060021
GO:GO:0060173 GO:GO:0007519 GO:GO:0001757
GeneTree:ENSGT00660000095141 KO:K09322 CTD:4223 OMA:DHTLFGC
EMBL:AAEX03009347 RefSeq:XP_539446.2 Ensembl:ENSCAFT00000003805
GeneID:482329 KEGG:cfa:482329 NextBio:20856948 Uniprot:E2RDU9
Length = 303
Score = 127 (49.8 bits), Expect = 6.1e-05, P = 6.1e-05
Identities = 39/116 (33%), Positives = 54/116 (46%)
Query: 41 NAMDAGEMGLIGEQFDPSVVGR--IREEEFESRSGSDNVEGASGDDQEANE----DGPPR 94
N+ G G P GR + E E RSG + S D QE N + PR
Sbjct: 129 NSSSLGSSTPTGAACAPGDYGRQALSPAEAEKRSGGKR-KSDSSDSQEGNYKSEVNSKPR 187
Query: 95 KKKYHRHTPHQIQELESFFKECPHPDEKQRSELSRRLGLESKQIKFWFQNRRTQMK 150
K++ T QI+ELE+ F + +R E++ L L +Q+K WFQNRR + K
Sbjct: 188 KERT-AFTKEQIRELEAEFAHHNYLTRLRRYEIAVNLDLTERQVKVWFQNRRMKWK 242
>UNIPROTKB|P50222 [details] [associations]
symbol:MEOX2 "Homeobox protein MOX-2" species:9606 "Homo
sapiens" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0001525 "angiogenesis"
evidence=IEA] [GO:0001757 "somite specification" evidence=IEA]
[GO:0007519 "skeletal muscle tissue development" evidence=IEA]
[GO:0060021 "palate development" evidence=IEA] [GO:0060173 "limb
development" evidence=IEA] [GO:0016607 "nuclear speck"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0007275 "multicellular
organismal development" evidence=TAS] [GO:0008015 "blood
circulation" evidence=TAS] [GO:0043565 "sequence-specific DNA
binding" evidence=IDA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0007275 GO:GO:0005737 GO:GO:0008015
GO:GO:0016607 GO:GO:0043565 GO:GO:0003700 GO:GO:0001525
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0060021 GO:GO:0060173 eggNOG:NOG250192 GO:GO:0007519
GO:GO:0001757 HOGENOM:HOG000230987 HOVERGEN:HBG052456 KO:K09322
EMBL:X82629 EMBL:L36328 EMBL:AC005550 EMBL:AC004452 EMBL:BC017021
IPI:IPI00030729 PIR:A55641 PIR:A56837 RefSeq:NP_005915.2
UniGene:Hs.170355 ProteinModelPortal:P50222 SMR:P50222
IntAct:P50222 MINT:MINT-202865 STRING:P50222 PhosphoSite:P50222
DMDM:93141286 PRIDE:P50222 DNASU:4223 Ensembl:ENST00000262041
GeneID:4223 KEGG:hsa:4223 UCSC:uc003stc.3 CTD:4223
GeneCards:GC07M015617 H-InvDB:HIX0006493 HGNC:HGNC:7014 MIM:600535
neXtProt:NX_P50222 PharmGKB:PA30748 InParanoid:P50222 OMA:DHTLFGC
OrthoDB:EOG4PZJ7H PhylomeDB:P50222 GenomeRNAi:4223 NextBio:16667
ArrayExpress:P50222 Bgee:P50222 CleanEx:HS_MEOX2
Genevestigator:P50222 GermOnline:ENSG00000106511 Uniprot:P50222
Length = 304
Score = 127 (49.8 bits), Expect = 6.2e-05, P = 6.2e-05
Identities = 39/116 (33%), Positives = 54/116 (46%)
Query: 41 NAMDAGEMGLIGEQFDPSVVGR--IREEEFESRSGSDNVEGASGDDQEANE----DGPPR 94
N+ G G P GR + E E RSG + S D QE N + PR
Sbjct: 130 NSSSLGSSTPTGAACAPGDYGRQALSPAEAEKRSGGKR-KSDSSDSQEGNYKSEVNSKPR 188
Query: 95 KKKYHRHTPHQIQELESFFKECPHPDEKQRSELSRRLGLESKQIKFWFQNRRTQMK 150
K++ T QI+ELE+ F + +R E++ L L +Q+K WFQNRR + K
Sbjct: 189 KERT-AFTKEQIRELEAEFAHHNYLTRLRRYEIAVNLDLTERQVKVWFQNRRMKWK 243
>ZFIN|ZDB-GENE-990415-15 [details] [associations]
symbol:arxa "aristaless related homeobox a"
species:7955 "Danio rerio" [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 ZFIN:ZDB-GENE-990415-15 GO:GO:0007275 GO:GO:0005634
GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
SUPFAM:SSF46689 InterPro:IPR003654 Pfam:PF03826 PROSITE:PS50803
eggNOG:NOG313402 KO:K09452 EMBL:AB006104 IPI:IPI00502004
RefSeq:NP_571459.1 UniGene:Dr.9011 ProteinModelPortal:O42115
SMR:O42115 STRING:O42115 PRIDE:O42115 Ensembl:ENSDART00000080810
GeneID:30657 KEGG:dre:30657 CTD:30657 GeneTree:ENSGT00700000104279
HOGENOM:HOG000012381 HOVERGEN:HBG004285 InParanoid:O42115
OMA:HYLEGGP OrthoDB:EOG43TZW9 NextBio:20807013 ArrayExpress:O42115
Bgee:O42115 Uniprot:O42115
Length = 453
Score = 130 (50.8 bits), Expect = 6.2e-05, P = 6.2e-05
Identities = 30/82 (36%), Positives = 49/82 (59%)
Query: 71 RSGSDNVEGASGDDQEANEDGPPRKKKYHR--HTPHQIQELESFFKECPHPDEKQRSELS 128
+ G D+V ++G D E E RK++ +R T +Q++ELE F++ +PD R EL+
Sbjct: 192 KDGEDSVCLSAGSDSE--EGMLKRKQRRYRTTFTSYQLEELERAFQKTHYPDVFTREELA 249
Query: 129 RRLGLESKQIKFWFQNRRTQMK 150
RL L +++ WFQNRR + +
Sbjct: 250 MRLDLTEARVQVWFQNRRAKWR 271
>UNIPROTKB|F1SMS6 [details] [associations]
symbol:RAX "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0060173 "limb
development" evidence=IEA] [GO:0043010 "camera-type eye
development" evidence=IEA] [GO:0021854 "hypothalamus development"
evidence=IEA] [GO:0007389 "pattern specification process"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0043010
InterPro:IPR003654 Pfam:PF03826 PROSITE:PS50803 GO:GO:0007389
GO:GO:0060173 GO:GO:0021854 GeneTree:ENSGT00700000104256
OMA:CGPGFGD EMBL:CU076088 Ensembl:ENSSSCT00000005417 Uniprot:F1SMS6
Length = 347
Score = 128 (50.1 bits), Expect = 6.4e-05, P = 6.4e-05
Identities = 39/128 (30%), Positives = 65/128 (50%)
Query: 71 RSGSDNVEGASGDDQEANEDGPPRKKKYHRH----TPHQIQELESFFKECPHPDEKQRSE 126
RS V A+ D + +E+ P KKK+ R+ T +Q+ ELE F++ +PD R E
Sbjct: 111 RSPGLPVGPAAPSDSKLSEEEQP-KKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREE 169
Query: 127 LSRRLGLESKQIKFWFQNRRTQMKTQMERHENIILRQEHDKLRAENEMLKDAMKNP---T 183
L+ ++ L +++ WFQNRR + + Q E+ E ++ + L + + A P +
Sbjct: 170 LAGKVNLPEVRVQVWFQNRRAKWRRQ-EKLEVSSMKLQDSPLLSFSRSPPAAALAPLGAS 228
Query: 184 CNNCGGPA 191
GGPA
Sbjct: 229 PEGSGGPA 236
>UNIPROTKB|E1BF87 [details] [associations]
symbol:PRRX2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0051216 "cartilage
development" evidence=IEA] [GO:0048844 "artery morphogenesis"
evidence=IEA] [GO:0048701 "embryonic cranial skeleton
morphogenesis" evidence=IEA] [GO:0045880 "positive regulation of
smoothened signaling pathway" evidence=IEA] [GO:0042474 "middle ear
morphogenesis" evidence=IEA] [GO:0042472 "inner ear morphogenesis"
evidence=IEA] [GO:0030326 "embryonic limb morphogenesis"
evidence=IEA] [GO:0002053 "positive regulation of mesenchymal cell
proliferation" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0042472
GO:GO:0030326 GO:GO:0051216 InterPro:IPR003654 Pfam:PF03826
PROSITE:PS50803 GO:GO:0048844 GO:GO:0048701
GeneTree:ENSGT00700000104279 GO:GO:0002053 GO:GO:0045880
GO:GO:0042474 OMA:GVSMANS EMBL:DAAA02032213 EMBL:DAAA02032214
EMBL:DAAA02032215 IPI:IPI00713783 Ensembl:ENSBTAT00000003817
Uniprot:E1BF87
Length = 166
Score = 113 (44.8 bits), Expect = 6.4e-05, Sum P(2) = 6.4e-05
Identities = 24/61 (39%), Positives = 35/61 (57%)
Query: 94 RKKKYHRH----TPHQIQELESFFKECPHPDEKQRSELSRRLGLESKQIKFWFQNRRTQM 149
RKKK R+ Q+Q LE F+ +PD R EL+RR+ L +++ WFQNRR +
Sbjct: 13 RKKKQRRNRTTFNSSQLQALERVFERTHYPDAFVREELARRVNLSEARVQVWFQNRRAKF 72
Query: 150 K 150
+
Sbjct: 73 R 73
Score = 37 (18.1 bits), Expect = 6.4e-05, Sum P(2) = 6.4e-05
Identities = 9/20 (45%), Positives = 14/20 (70%)
Query: 189 GPAVPG-SVSNYELQQLRIE 207
GPA PG S++N + LR++
Sbjct: 133 GPATPGVSMAN-SIASLRLK 151
>ZFIN|ZDB-GENE-990415-205 [details] [associations]
symbol:vsx1 "visual system homeobox 1 homolog,
chx10-like" species:7955 "Danio rerio" [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0007601 "visual perception" evidence=IEA]
[GO:0050896 "response to stimulus" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
ZFIN:ZDB-GENE-990415-205 GO:GO:0007275 GO:GO:0005634 GO:GO:0007601
GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 GO:GO:0050896
Gene3D:1.10.10.60 SUPFAM:SSF46689 eggNOG:NOG237888
HOGENOM:HOG000115909 InterPro:IPR023339 PROSITE:PS51496 CTD:30813
HOVERGEN:HBG036251 KO:K09335 OrthoDB:EOG4907B0 EMBL:AF025348
IPI:IPI00513332 RefSeq:NP_571408.1 UniGene:Dr.558
ProteinModelPortal:O42250 SMR:O42250 STRING:O42250 GeneID:30598
KEGG:dre:30598 InParanoid:O42250 NextBio:20806965
ArrayExpress:O42250 Uniprot:O42250
Length = 344
Score = 133 (51.9 bits), Expect = 6.4e-05, Sum P(2) = 6.4e-05
Identities = 28/74 (37%), Positives = 40/74 (54%)
Query: 81 SGDDQEANEDGPPRKKKYHRH----TPHQIQELESFFKECPHPDEKQRSELSRRLGLESK 136
SGD + G +K+K RH T HQ++ELE F E +PD R L+ + L
Sbjct: 134 SGDRNDGKNSGNSQKRKKRRHRTVFTSHQLEELEKAFNEAHYPDVYAREMLAMKTELPED 193
Query: 137 QIKFWFQNRRTQMK 150
+I+ WFQNRR + +
Sbjct: 194 RIQVWFQNRRAKWR 207
Score = 38 (18.4 bits), Expect = 6.4e-05, Sum P(2) = 6.4e-05
Identities = 11/39 (28%), Positives = 20/39 (51%)
Query: 631 PLQE-MVHIAKGQAPGNCASLLRAGAMNVNDSGMLILQE 668
PL E +++ AK G+CA L ++ M I+++
Sbjct: 234 PLPESIINSAKSGMMGSCAPWLLGEPAGMHKKSMEIVKK 272
>UNIPROTKB|E1BHB8 [details] [associations]
symbol:LOC615339 "Uncharacterized protein" species:9913
"Bos taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0060173 "limb
development" evidence=IEA] [GO:0043010 "camera-type eye
development" evidence=IEA] [GO:0021854 "hypothalamus development"
evidence=IEA] [GO:0007389 "pattern specification process"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0043010
InterPro:IPR003654 Pfam:PF03826 PROSITE:PS50803 GO:GO:0007389
GO:GO:0060173 GO:GO:0021854 GeneTree:ENSGT00700000104256
OMA:CGPGFGD EMBL:DAAA02057180 IPI:IPI00710082
Ensembl:ENSBTAT00000030986 Uniprot:E1BHB8
Length = 351
Score = 128 (50.1 bits), Expect = 6.5e-05, P = 6.5e-05
Identities = 26/75 (34%), Positives = 44/75 (58%)
Query: 80 ASGDDQEANEDGPPRKKKYHR--HTPHQIQELESFFKECPHPDEKQRSELSRRLGLESKQ 137
A GD + E+ P +K + +R T +Q+ ELE F++ +PD R EL+ ++ L +
Sbjct: 121 APGDSKLLEEEQPKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAGKVNLPEVR 180
Query: 138 IKFWFQNRRTQMKTQ 152
++ WFQNRR + + Q
Sbjct: 181 VQVWFQNRRAKWRRQ 195
>MGI|MGI:107374 [details] [associations]
symbol:Pitx1 "paired-like homeodomain transcription factor 1"
species:10090 "Mus musculus" [GO:0000988 "protein binding
transcription factor activity" evidence=IPI] [GO:0001501 "skeletal
system development" evidence=IMP] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISO] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005667 "transcription factor complex"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0014707 "branchiomeric skeletal muscle development"
evidence=IMP] [GO:0021983 "pituitary gland development"
evidence=IMP] [GO:0035116 "embryonic hindlimb morphogenesis"
evidence=IGI] [GO:0035137 "hindlimb morphogenesis"
evidence=IDA;IMP] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IGI;IDA] [GO:0048625
"myoblast cell fate commitment" evidence=IMP] [GO:0051216
"cartilage development" evidence=IMP] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR016233 InterPro:IPR017970
Pfam:PF00046 PIRSF:PIRSF000563 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 MGI:MGI:107374 GO:GO:0005737 GO:GO:0005730
GO:GO:0043565 GO:GO:0045944 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0005667 GO:GO:0051216
GO:GO:0035116 GO:GO:0021983 InterPro:IPR003654 Pfam:PF03826
PROSITE:PS50803 GO:GO:0000988 GO:GO:0048625 GO:GO:0014707
eggNOG:NOG249113 HOGENOM:HOG000273886 HOVERGEN:HBG068770
OrthoDB:EOG4R503Q CTD:5307 KO:K09356 OMA:CKNSYLP EMBL:U54499
EMBL:U71206 EMBL:BC012696 EMBL:U70371 IPI:IPI00108083
RefSeq:NP_035227.1 UniGene:Mm.135195 ProteinModelPortal:P70314
SMR:P70314 STRING:P70314 PhosphoSite:P70314 PRIDE:P70314
Ensembl:ENSMUST00000021968 GeneID:18740 KEGG:mmu:18740
InParanoid:P70314 NextBio:294881 Bgee:P70314 CleanEx:MM_PITX1
Genevestigator:P70314 GermOnline:ENSMUSG00000021506 Uniprot:P70314
Length = 315
Score = 127 (49.8 bits), Expect = 6.7e-05, P = 6.7e-05
Identities = 33/102 (32%), Positives = 55/102 (53%)
Query: 64 REEEFESRSGSDNVEGASGDDQEANEDGPPRKKKYHRHTPH----QIQELESFFKECPHP 119
+E E++ D G++G A ED P +KKK R H Q+QELE+ F+ +P
Sbjct: 58 KERGGEAKGPEDGGAGSAGCGGGA-ED-PAKKKKQRRQRTHFTSQQLQELEATFQRNRYP 115
Query: 120 DEKQRSELSRRLGLESKQIKFWFQNRRTQMKTQMERHENIIL 161
D R E++ L +++ WF+NRR + + + ER++ + L
Sbjct: 116 DMSMREEIAVWTNLTEPRVRVWFKNRRAKWRKR-ERNQQLDL 156
>ZFIN|ZDB-GENE-050419-191 [details] [associations]
symbol:alx1 "ALX homeobox 1" species:7955 "Danio
rerio" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0048701
"embryonic cranial skeleton morphogenesis" evidence=IMP]
[GO:0001755 "neural crest cell migration" evidence=IMP] [GO:0007275
"multicellular organismal development" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
ZFIN:ZDB-GENE-050419-191 GO:GO:0007275 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR003654
Pfam:PF03826 PROSITE:PS50803 GeneTree:ENSGT00700000104013
EMBL:BX649507 IPI:IPI00619192 Ensembl:ENSDART00000091244
Uniprot:F1QTN5
Length = 321
Score = 127 (49.8 bits), Expect = 7.0e-05, P = 7.0e-05
Identities = 39/130 (30%), Positives = 63/130 (48%)
Query: 72 SGSDNVE-GASGDDQEANEDGPPRKKKYHR--HTPHQIQELESFFKECPHPDEKQRSELS 128
SG D + G+ ++N KK+ HR T Q++ELE F++ +PD R +L+
Sbjct: 98 SGPDKTDLDELGEKCDSNVSSS--KKRRHRTTFTSAQLEELEKVFQKTHYPDVYVREQLA 155
Query: 129 RRLGLESKQIKFWFQNRRTQMKTQMERHENIILRQEHDKLRAENEMLK--DAMKNPTCNN 186
R L +++ WFQNRR + + + ER+ I + H + ML D+ + N
Sbjct: 156 MRTELTEARVQVWFQNRRAKWRKR-ERYGQIQQAKSHFAATYDISMLPRTDSYSQISNNL 214
Query: 187 CGGPAVPGSV 196
GP+ SV
Sbjct: 215 WTGPSAGSSV 224
>FB|FBgn0085396 [details] [associations]
symbol:CG34367 species:7227 "Drosophila melanogaster"
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 EMBL:AE014134 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR003654 Pfam:PF03826
PROSITE:PS50803 GO:GO:0000976 GeneTree:ENSGT00700000104279
UniGene:Dm.26780 GeneID:5740879 KEGG:dme:Dmel_CG34367
FlyBase:FBgn0085396 GenomeRNAi:5740879 NextBio:20891918
RefSeq:NP_001097140.1 ProteinModelPortal:A8DYR8 SMR:A8DYR8
EnsemblMetazoa:FBtr0112592 UCSC:CG34367-RC InParanoid:A8DYR8
OrthoDB:EOG4M640D PhylomeDB:A8DYR8 Bgee:A8DYR8 Uniprot:A8DYR8
Length = 420
Score = 129 (50.5 bits), Expect = 7.1e-05, P = 7.1e-05
Identities = 33/93 (35%), Positives = 48/93 (51%)
Query: 66 EEFESRSGSDNVEGASGDDQEANEDGPPRKKKYHRHTPHQIQELESFFKECPHPDEKQRS 125
EE S S N E D + + +++ T Q+ ELE F+E +PD R
Sbjct: 166 EECVSPEPSRNREHC--DPLDTSLVNTKQRRSRTNFTLDQLNELERLFEETHYPDAFMRE 223
Query: 126 ELSRRLGLESKQIKFWFQNRRTQMKTQMERHEN 158
ELS+RLGL +++ WFQNRR + + +HEN
Sbjct: 224 ELSQRLGLSEARVQVWFQNRRAKCR----KHEN 252
>POMBASE|SPBC21B10.13c [details] [associations]
symbol:yox1 "MBF complex negative regulatory component
Yox1" species:4896 "Schizosaccharomyces pombe" [GO:0000083
"regulation of transcription involved in G1/S phase of mitotic cell
cycle" evidence=IC;TAS] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IMP]
[GO:0000978 "RNA polymerase II core promoter proximal region
sequence-specific DNA binding" evidence=IC;IMP] [GO:0001078 "RNA
polymerase II core promoter proximal region sequence-specific DNA
binding transcription factor activity involved in negative
regulation of transcription" evidence=NAS] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA;IPI]
[GO:0030907 "MBF transcription complex" evidence=NAS] [GO:0043565
"sequence-specific DNA binding" evidence=ISM] [GO:0071276 "cellular
response to cadmium ion" evidence=IMP] [GO:0071585 "detoxification
of cadmium ion" evidence=IMP] [GO:0071930 "negative regulation of
transcription involved in G1/S phase of mitotic cell cycle"
evidence=IMP] [GO:0071931 "positive regulation of transcription
involved in G1/S phase of mitotic cell cycle" evidence=IMP]
InterPro:IPR001356 InterPro:IPR009057 Pfam:PF00046 PROSITE:PS50071
SMART:SM00389 PomBase:SPBC21B10.13c EMBL:CU329671 GO:GO:0071276
GO:GO:0071585 GO:GO:0001078 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0000978 GO:GO:0030907 GO:GO:0071931 eggNOG:COG5576
GO:GO:0071930 EMBL:L14773 OrthoDB:EOG4NKG55 PIR:S50010
RefSeq:NP_595674.1 ProteinModelPortal:P40923 STRING:P40923
EnsemblFungi:SPBC21B10.13c.1 GeneID:2540309 KEGG:spo:SPBC21B10.13c
NextBio:20801438 Uniprot:P40923
Length = 201
Score = 121 (47.7 bits), Expect = 7.4e-05, P = 7.4e-05
Identities = 34/125 (27%), Positives = 59/125 (47%)
Query: 70 SRSGSDNVEGASGDDQEANEDGPPRKKKYHRHTPH-QIQELESFFKECPHPDEKQRSELS 128
S+SG+ + S ++ + +ED +KK R T + LE +F + P P +R ELS
Sbjct: 8 SKSGNTGKDLISNNEAKNHEDEETHQKKRRRRTTDAEATLLEQYFLKTPKPSLIERQELS 67
Query: 129 RRL--GLESKQIKFWFQNRRTQMKTQMERHENIILRQEHDKLRAENEMLKDAMKNPTCNN 186
++L + ++++ WFQN+R + R N + R + EN +L+ C
Sbjct: 68 KKLKSSMTPRELQIWFQNKRQSL-----RRSNCLSRNRLEGT-GENSLLRRKSTLTLCET 121
Query: 187 CGGPA 191
G A
Sbjct: 122 STGQA 126
>UNIPROTKB|F1NYD6 [details] [associations]
symbol:VSX1 "Visual system homeobox 1" species:9031 "Gallus
gallus" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0007601 "visual perception" evidence=IEA] [GO:0042551 "neuron
maturation" evidence=IEA] [GO:0060040 "retinal bipolar neuron
differentiation" evidence=IEA] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
GeneTree:ENSGT00700000104013 InterPro:IPR023339 PROSITE:PS51496
IPI:IPI00577521 EMBL:AADN02041203 Ensembl:ENSGALT00000013957
OMA:MEVSRKA Uniprot:F1NYD6
Length = 215
Score = 122 (48.0 bits), Expect = 7.9e-05, P = 7.9e-05
Identities = 28/77 (36%), Positives = 39/77 (50%)
Query: 78 EGASGDDQEANEDGPPRKKKYHRH----TPHQIQELESFFKECPHPDEKQRSELSRRLGL 133
+ SGD E K+K RH T HQ++ELE F E +PD R L+ + L
Sbjct: 2 DSLSGDASELKMPASQIKRKKRRHRTVFTAHQLEELEKAFNEAHYPDVYAREMLAVKTEL 61
Query: 134 ESKQIKFWFQNRRTQMK 150
+I+ WFQNRR + +
Sbjct: 62 PEDRIQVWFQNRRAKWR 78
>ZFIN|ZDB-GENE-000823-1 [details] [associations]
symbol:hoxa9a "homeo box A9a" species:7955 "Danio
rerio" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA]
InterPro:IPR001356 InterPro:IPR006711 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 Pfam:PF04617 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 ZFIN:ZDB-GENE-000823-1 GO:GO:0007275
GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
eggNOG:NOG286554 GeneTree:ENSGT00700000104054 EMBL:CR382300
HOVERGEN:HBG016849 EMBL:AF071248 EMBL:BC090700 EMBL:DQ060535
EMBL:Y14538 IPI:IPI00499910 RefSeq:NP_571607.2 UniGene:Dr.5730
ProteinModelPortal:Q9PWL6 SMR:Q9PWL6 STRING:Q9PWL6
Ensembl:ENSDART00000006934 Ensembl:ENSDART00000147736 GeneID:58047
KEGG:dre:58047 CTD:58047 HOGENOM:HOG000231180 InParanoid:Q9PWL6
OrthoDB:EOG4D26QZ NextBio:20892311 Bgee:Q9PWL6 InterPro:IPR017112
PIRSF:PIRSF037109 Uniprot:Q9PWL6
Length = 250
Score = 124 (48.7 bits), Expect = 8.0e-05, P = 8.0e-05
Identities = 33/89 (37%), Positives = 46/89 (51%)
Query: 66 EEFESRSGSDNVEGASGDDQE---ANE-DGPPRKKKYHRHTPHQIQELESFFKECPHPDE 121
E + S ++EG G D E +N +KK +T HQI ELE F +
Sbjct: 152 ESSRTAEKSGDIEGKPGADPENPVSNWLHASSTRKKRCPYTKHQILELEKEFLFNTYLTR 211
Query: 122 KQRSELSRRLGLESKQIKFWFQNRRTQMK 150
+R E++R L L +Q+K WFQNRR +MK
Sbjct: 212 DRRYEVARLLNLTERQVKIWFQNRRMKMK 240
>ZFIN|ZDB-GENE-000822-3 [details] [associations]
symbol:hoxc11b "homeo box C11b" species:7955 "Danio
rerio" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 ZFIN:ZDB-GENE-000822-3 GO:GO:0005634
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 InterPro:IPR021918 Pfam:PF12045
GeneTree:ENSGT00700000104263 EMBL:CABZ01085068 IPI:IPI00611149
RefSeq:XP_699549.1 UniGene:Dr.75785 UniGene:Dr.91190
Ensembl:ENSDART00000111698 GeneID:570925 KEGG:dre:570925 CTD:570925
NextBio:20890353 Bgee:F1RAP5 Uniprot:F1RAP5
Length = 306
Score = 126 (49.4 bits), Expect = 8.1e-05, P = 8.1e-05
Identities = 35/92 (38%), Positives = 54/92 (58%)
Query: 64 REEEFESRSGSDNVEGASG---DDQ-EANEDGPPR-KKKYHRHTPHQIQELESFFKECPH 118
+E E E + S + E +SG D+Q ++ PR +KK +T QI+ELE F +
Sbjct: 199 KELECEKNTTSGSFETSSGTKNDNQTKSGHSTTPRMRKKRCPYTKFQIRELEREFFFNVY 258
Query: 119 PDEKQRSELSRRLGLESKQIKFWFQNRRTQMK 150
++++R +LSR L L +Q+K WFQNRR + K
Sbjct: 259 INKEKRLQLSRILNLTDRQVKIWFQNRRMKEK 290
>FB|FBgn0010323 [details] [associations]
symbol:Gsc "Goosecoid" species:7227 "Drosophila melanogaster"
[GO:0005634 "nucleus" evidence=IC;ISS;NAS] [GO:0046982 "protein
heterodimerization activity" evidence=IPI] [GO:0001078 "RNA
polymerase II core promoter proximal region sequence-specific DNA
binding transcription factor activity involved in negative
regulation of transcription" evidence=IDA] [GO:0042803 "protein
homodimerization activity" evidence=IPI] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=NAS] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0007275 GO:GO:0005634 EMBL:AE014134
GO:GO:0001078 GO:GO:0043565 Gene3D:1.10.10.60 SUPFAM:SSF46689
CTD:145258 eggNOG:NOG247162 KO:K09324 EMBL:X95420 EMBL:U52968
PIR:S70617 RefSeq:NP_476949.1 UniGene:Dm.4841
ProteinModelPortal:P54366 SMR:P54366 IntAct:P54366 MINT:MINT-314608
STRING:P54366 PRIDE:P54366 GeneID:33240 KEGG:dme:Dmel_CG2851
FlyBase:FBgn0010323 HOGENOM:HOG000276707 InParanoid:P54366
OrthoDB:EOG4RV17N GenomeRNAi:33240 NextBio:782613 Bgee:P54366
GermOnline:CG2851 Uniprot:P54366
Length = 419
Score = 134 (52.2 bits), Expect = 8.2e-05, Sum P(2) = 8.2e-05
Identities = 30/100 (30%), Positives = 56/100 (56%)
Query: 92 PPRKKKYHR--HTPHQIQELESFFKECPHPDEKQRSELSRRLGLESKQIKFWFQNRRTQM 149
PP++K+ HR T Q+++LE+ F + +PD R +L+ ++ L+ ++++ WF+NRR +
Sbjct: 282 PPKRKRRHRTIFTEEQLEQLEATFDKTHYPDVVLREQLALKVDLKEERVEVWFKNRRAKW 341
Query: 150 KTQMERHENIILRQEHDKLRAENEMLKDAMKNPTCNNCGG 189
+ Q R+E ++LR E + N T N+ G
Sbjct: 342 RKQK--------REEQERLRKLQEEQCGSTTNGTTNSSSG 373
Score = 39 (18.8 bits), Expect = 8.2e-05, Sum P(2) = 8.2e-05
Identities = 8/22 (36%), Positives = 14/22 (63%)
Query: 723 SNGTMVKTEGSSNESGGCLLTV 744
+NGT + G+++ +G LTV
Sbjct: 364 TNGTTNSSSGTTSSTGNGSLTV 385
>UNIPROTKB|F1NFN6 [details] [associations]
symbol:DLX5 "Homeobox protein DLX-5" species:9031 "Gallus
gallus" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0001649
"osteoblast differentiation" evidence=IEA] [GO:0001958
"endochondral ossification" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0007411 "axon guidance" evidence=IEA] [GO:0008283
"cell proliferation" evidence=IEA] [GO:0030326 "embryonic limb
morphogenesis" evidence=IEA] [GO:0030855 "epithelial cell
differentiation" evidence=IEA] [GO:0042472 "inner ear
morphogenesis" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0048646 "anatomical structure formation involved in
morphogenesis" evidence=IEA] [GO:0050679 "positive regulation of
epithelial cell proliferation" evidence=IEA] [GO:0060021 "palate
development" evidence=IEA] [GO:0060166 "olfactory pit development"
evidence=IEA] [GO:0060325 "face morphogenesis" evidence=IEA]
[GO:0071837 "HMG box domain binding" evidence=IEA] [GO:0090263
"positive regulation of canonical Wnt receptor signaling pathway"
evidence=IEA] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
GO:GO:0005737 GO:GO:0008283 GO:GO:0045944 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0000976 GO:GO:0090263 GO:GO:0050679
GeneTree:ENSGT00700000104439 EMBL:AC145963 IPI:IPI00821107
Ensembl:ENSGALT00000014862 ArrayExpress:F1NFN6 Uniprot:F1NFN6
Length = 77
Score = 106 (42.4 bits), Expect = 8.3e-05, P = 8.3e-05
Identities = 23/70 (32%), Positives = 42/70 (60%)
Query: 90 DGPPRKKKYHR--HTPHQIQELESFFKECPHPDEKQRSELSRRLGLESKQIKFWFQNRRT 147
+G P+K + R ++ Q+ L+ F++ + +R+EL+ LGL Q+K WFQN+R+
Sbjct: 1 NGKPKKVRKPRTIYSSFQLAALQRRFQKTQYLALPERAELAASLGLTQTQVKIWFQNKRS 60
Query: 148 QMKTQMERHE 157
++K M+ E
Sbjct: 61 KIKKIMKNGE 70
>UNIPROTKB|P14839 [details] [associations]
symbol:HOXB6 "Homeobox protein Hox-B6" species:9031 "Gallus
gallus" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071
SMART:SM00389 GO:GO:0007275 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 EMBL:X16847 IPI:IPI00589688
PIR:S08303 ProteinModelPortal:P14839 SMR:P14839 Uniprot:P14839
Length = 84
Score = 106 (42.4 bits), Expect = 8.3e-05, P = 8.3e-05
Identities = 27/81 (33%), Positives = 43/81 (53%)
Query: 91 GPPRKKKYHRHTPHQIQELESFFKECPHPDEKQRSELSRRLGLESKQIKFWFQNRRTQMK 150
GP R+ + +T +Q ELE F + ++R E++ L L +QIK WFQNRR + K
Sbjct: 5 GPARRGR-QTYTRYQTLELEKEFHFNRYLTRRRRIEIAHSLCLTERQIKIWFQNRRMKWK 63
Query: 151 TQMERHENIILRQEHDKLRAE 171
+ + + L E ++ AE
Sbjct: 64 KENKLLSSSQLSAEEEEKTAE 84
>UNIPROTKB|F1MJX0 [details] [associations]
symbol:CDX2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0060711 "labyrinthine layer development" evidence=IEA]
[GO:0045597 "positive regulation of cell differentiation"
evidence=IEA] [GO:0045197 "establishment or maintenance of
epithelial cell apical/basal polarity" evidence=IEA] [GO:0035019
"somatic stem cell maintenance" evidence=IEA] [GO:0017053
"transcriptional repressor complex" evidence=IEA] [GO:0009952
"anterior/posterior pattern specification" evidence=IEA]
[GO:0008333 "endosome to lysosome transport" evidence=IEA]
[GO:0003714 "transcription corepressor activity" evidence=IEA]
[GO:0001829 "trophectodermal cell differentiation" evidence=IEA]
[GO:0001568 "blood vessel development" evidence=IEA] [GO:0000794
"condensed nuclear chromosome" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0000976
"transcription regulatory region sequence-specific DNA binding"
evidence=IEA] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 GO:GO:0017053
GO:GO:0003714 GO:GO:0009952 GO:GO:0045597 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00530000063388 GO:GO:0000122 GO:GO:0001829
GO:GO:0000794 GO:GO:0008333 GO:GO:0035019 GO:GO:0001568
GO:GO:0000976 GO:GO:0060711 GO:GO:0045197 EMBL:DAAA02033157
IPI:IPI00838985 Ensembl:ENSBTAT00000047376 Uniprot:F1MJX0
Length = 142
Score = 106 (42.4 bits), Expect = 8.3e-05, P = 8.3e-05
Identities = 23/55 (41%), Positives = 33/55 (60%)
Query: 95 KKKYHR-HTPHQIQELESFFKECPHPDEKQRSELSRRLGLESKQIKFWFQNRRTQ 148
K KY +T HQ ELE F + ++++EL+ LGL +Q+K WFQNRR +
Sbjct: 22 KDKYRVVYTDHQRLELEKEFHYSRYITIRRKAELAATLGLSERQVKIWFQNRRAK 76
>UNIPROTKB|F6VMK5 [details] [associations]
symbol:NKX3-1 "Uncharacterized protein" species:9796 "Equus
caballus" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=ISS] [GO:0000988 "protein
binding transcription factor activity" evidence=ISS] [GO:0001047
"core promoter binding" evidence=ISS] [GO:0001934 "positive
regulation of protein phosphorylation" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0004882 "androgen receptor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0006919
"activation of cysteine-type endopeptidase activity involved in
apoptotic process" evidence=ISS] [GO:0007431 "salivary gland
development" evidence=ISS] [GO:0008284 "positive regulation of cell
proliferation" evidence=ISS] [GO:0008285 "negative regulation of
cell proliferation" evidence=ISS] [GO:0010628 "positive regulation
of gene expression" evidence=ISS] [GO:0010942 "positive regulation
of cell death" evidence=ISS] [GO:0014068 "positive regulation of
phosphatidylinositol 3-kinase cascade" evidence=ISS] [GO:0030284
"estrogen receptor activity" evidence=ISS] [GO:0030295 "protein
kinase activator activity" evidence=ISS] [GO:0030331 "estrogen
receptor binding" evidence=ISS] [GO:0030521 "androgen receptor
signaling pathway" evidence=ISS] [GO:0033574 "response to
testosterone stimulus" evidence=ISS] [GO:0043280 "positive
regulation of cysteine-type endopeptidase activity involved in
apoptotic process" evidence=ISS] [GO:0043491 "protein kinase B
signaling cascade" evidence=ISS] [GO:0043569 "negative regulation
of insulin-like growth factor receptor signaling pathway"
evidence=ISS] [GO:0043621 "protein self-association" evidence=ISS]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0045931 "positive regulation of
mitotic cell cycle" evidence=ISS] [GO:0045944 "positive regulation
of transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0048754 "branching morphogenesis of an epithelial tube"
evidence=ISS] [GO:0050680 "negative regulation of epithelial cell
proliferation" evidence=ISS] [GO:0051781 "positive regulation of
cell division" evidence=ISS] [GO:0060442 "branching involved in
prostate gland morphogenesis" evidence=ISS] [GO:0060664 "epithelial
cell proliferation involved in salivary gland morphogenesis"
evidence=ISS] [GO:0060770 "negative regulation of epithelial cell
proliferation involved in prostate gland development" evidence=ISS]
[GO:0071383 "cellular response to steroid hormone stimulus"
evidence=ISS] [GO:0071899 "negative regulation of estrogen receptor
binding" evidence=ISS] [GO:2000836 "positive regulation of androgen
secretion" evidence=ISS] [GO:2001022 "positive regulation of
response to DNA damage stimulus" evidence=ISS] [GO:2001244
"positive regulation of intrinsic apoptotic signaling pathway"
evidence=ISS] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0045892 GO:GO:0007507
GO:GO:0045931 GO:GO:0008284 GO:GO:0051781 GO:GO:0045944
GO:GO:0071456 GO:GO:0014068 GO:GO:0030295 GO:GO:0043621
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0008584 GO:GO:0001756 GO:GO:0006919 GO:GO:0035690
GO:GO:0010942 GO:GO:0060037 GO:GO:0033574 GO:GO:0001047
GO:GO:0008656 GO:GO:0043491 GO:GO:0000976 GO:GO:0004882
GO:GO:0071347 GO:GO:0071356 GO:GO:0030331 GO:GO:0000983
GO:GO:0060770 GO:GO:0001656 GO:GO:2001244 GO:GO:0043569
GO:GO:0048754 GeneTree:ENSGT00700000104206 GO:GO:0045930
GO:GO:2001022 GO:GO:0060442 GO:GO:0071850 GO:GO:0000988
GO:GO:0030284 GO:GO:0060664 GO:GO:0071899 GO:GO:0035907
GO:GO:2000836 OMA:YCLGGWN Ensembl:ENSECAT00000001320 Uniprot:F6VMK5
Length = 142
Score = 106 (42.4 bits), Expect = 8.3e-05, P = 8.3e-05
Identities = 26/79 (32%), Positives = 39/79 (49%)
Query: 72 SGSDNVEGASGDDQEANEDGPPRKKKYHRHTPHQIQELESFFKECPHPDEKQRSELSRRL 131
S +N GAS + ++ R + HT Q+ ELE F + +R+ L++ L
Sbjct: 12 SDCENTSGASRGLPQPSKQPQKRSRAAFSHT--QVIELERKFSRQKYLSAPERAHLAKNL 69
Query: 132 GLESKQIKFWFQNRRTQMK 150
L Q+K WFQNRR + K
Sbjct: 70 KLTETQVKIWFQNRRYKTK 88
>UNIPROTKB|Q9IAL2 [details] [associations]
symbol:VSX1 "Visual system homeobox 1" species:9031 "Gallus
gallus" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0007601 "visual perception" evidence=IEA]
[GO:0050896 "response to stimulus" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0007275 GO:GO:0005634 GO:GO:0007601
GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 GO:GO:0050896
Gene3D:1.10.10.60 SUPFAM:SSF46689 eggNOG:NOG237888
HOGENOM:HOG000115909 InterPro:IPR023339 PROSITE:PS51496 CTD:30813
HOVERGEN:HBG036251 KO:K09335 OrthoDB:EOG4907B0 EMBL:AF178670
IPI:IPI00577521 RefSeq:NP_990100.1 UniGene:Gga.3158
ProteinModelPortal:Q9IAL2 SMR:Q9IAL2 GeneID:395537 KEGG:gga:395537
InParanoid:Q9IAL2 NextBio:20815614 Uniprot:Q9IAL2
Length = 350
Score = 127 (49.8 bits), Expect = 8.3e-05, P = 8.3e-05
Identities = 31/83 (37%), Positives = 42/83 (50%)
Query: 72 SGSDNVEGASGDDQEANEDGPPRKKKYHRH----TPHQIQELESFFKECPHPDEKQRSEL 127
S SD + SGD E K+K RH T HQ++ELE F E +PD R L
Sbjct: 132 SASDE-DSLSGDASELKMPASQIKRKKRRHRTVFTAHQLEELEKAFNEAHYPDVYAREML 190
Query: 128 SRRLGLESKQIKFWFQNRRTQMK 150
+ + L +I+ WFQNRR + +
Sbjct: 191 AVKTELPEDRIQVWFQNRRAKWR 213
>UNIPROTKB|Q90VZ9 [details] [associations]
symbol:HOXA7 "Homeobox protein Hox-A7" species:9031 "Gallus
gallus" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
InterPro:IPR017970 InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025
PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
GO:GO:0007275 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 HOGENOM:HOG000231181 eggNOG:NOG238660
HOVERGEN:HBG016849 EMBL:AJ291729 EMBL:AF408695 IPI:IPI00573429
RefSeq:NP_989926.1 RefSeq:XP_003640750.1 RefSeq:XP_003640779.1
UniGene:Gga.5122 ProteinModelPortal:Q90VZ9 SMR:Q90VZ9
GeneID:100858514 GeneID:100858856 GeneID:395290 KEGG:gga:100858514
KEGG:gga:100858856 KEGG:gga:395290 CTD:3204 InParanoid:Q90VZ9
KO:K09307 OrthoDB:EOG4W9J4Z NextBio:20815375 Uniprot:Q90VZ9
Length = 219
Score = 122 (48.0 bits), Expect = 8.6e-05, P = 8.6e-05
Identities = 48/164 (29%), Positives = 70/164 (42%)
Query: 2 SFGSNS----VGMGSRVVAEIFPHCHSMASGAIAQFPLSLSIKNAMDAGEMGLIG-EQFD 56
SF SNS G G+ A P +++ S I Q P S DA + +Q
Sbjct: 30 SFASNSQRSGYGPGAGAFASSMPGLYNVNS-TIYQSPFSSGYSLGSDAYNLHCSSFDQNI 88
Query: 57 PSVVGRIREEEFESRSGSDNVEGASGDDQE---ANEDGPPRKKKYHRHTPHQIQELESFF 113
P + + + E S+ A + + GP RK+ +T +Q ELE F
Sbjct: 89 PVLCNDLTKPSCEKAEESNLHNQAEANFRIYPWMRSSGPDRKRGRQTYTRYQTLELEKEF 148
Query: 114 KECPHPDEKQRSELSRRLGLESKQIKFWFQNRRTQMKTQMERHE 157
+ ++R E++ L L +QIK WFQNRR MK + E E
Sbjct: 149 HFNRYLTRRRRIEIAHALCLTERQIKIWFQNRR--MKWKKEHKE 190
>ZFIN|ZDB-GENE-990714-27 [details] [associations]
symbol:pitx2 "paired-like homeodomain transcription
factor 2" species:7955 "Danio rerio" [GO:0021501 "prechordal plate
formation" evidence=IGI] [GO:0060971 "embryonic heart tube
left/right pattern formation" evidence=IDA] [GO:0071907
"determination of digestive tract left/right asymmetry"
evidence=IDA] [GO:0048382 "mesendoderm development" evidence=IDA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0043114
"regulation of vascular permeability" evidence=IGI] [GO:0061386
"closure of optic fissure" evidence=IMP] [GO:0048593 "camera-type
eye morphogenesis" evidence=IMP] [GO:0048703 "embryonic
viscerocranium morphogenesis" evidence=IMP] [GO:0048384 "retinoic
acid receptor signaling pathway" evidence=IMP] [GO:0060325 "face
morphogenesis" evidence=IMP] [GO:0048596 "embryonic camera-type eye
morphogenesis" evidence=IMP] [GO:0048701 "embryonic cranial
skeleton morphogenesis" evidence=IMP] [GO:0007275 "multicellular
organismal development" evidence=IEA] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR016233 InterPro:IPR017970
Pfam:PF00046 PIRSF:PIRSF000563 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 ZFIN:ZDB-GENE-990714-27 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0048384
InterPro:IPR003654 Pfam:PF03826 PROSITE:PS50803 GO:GO:0060325
GO:GO:0048382 GO:GO:0071907 GO:GO:0048703 GO:GO:0060971
GO:GO:0021501 GO:GO:0061386 eggNOG:NOG249113 HOGENOM:HOG000273886
HOVERGEN:HBG068770 GeneTree:ENSGT00700000104438 CTD:5308 KO:K04686
EMBL:AF156905 EMBL:AF156906 EMBL:AF181681 EMBL:AF132446
EMBL:AF132447 EMBL:BC092922 IPI:IPI00486280 IPI:IPI00507463
RefSeq:NP_571050.1 UniGene:Dr.81292 ProteinModelPortal:Q9W5Z2
SMR:Q9W5Z2 STRING:Q9W5Z2 Ensembl:ENSDART00000052569
Ensembl:ENSDART00000148319 GeneID:30164 KEGG:dre:30164
InParanoid:Q568C4 OMA:DMYPSYT NextBio:20806634 Bgee:Q9W5Z2
Uniprot:Q9W5Z2
Length = 314
Score = 126 (49.4 bits), Expect = 8.6e-05, P = 8.6e-05
Identities = 29/91 (31%), Positives = 50/91 (54%)
Query: 72 SGSDNVEGASGDDQ-EANEDGPPRKKKYHRHTPH----QIQELESFFKECPHPDEKQRSE 126
S ++VE G + E + D P +KK+ R H Q+QELE+ F+ +PD R E
Sbjct: 55 SSPESVEKEKGQSKNEDSNDDPSKKKRQRRQRTHFTSQQLQELEATFQRNRYPDMSTREE 114
Query: 127 LSRRLGLESKQIKFWFQNRRTQMKTQMERHE 157
++ L +++ WF+NRR + + + ER++
Sbjct: 115 IAVWTNLTEARVRVWFKNRRAKWRKR-ERNQ 144
>ZFIN|ZDB-GENE-060421-3623 [details] [associations]
symbol:pitx1 "paired-like homeodomain
transcription factor 1" species:7955 "Danio rerio" [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR016233
InterPro:IPR017970 Pfam:PF00046 PIRSF:PIRSF000563 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 ZFIN:ZDB-GENE-060421-3623
GO:GO:0007275 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR003654 Pfam:PF03826
PROSITE:PS50803 HOVERGEN:HBG068770 OMA:CKNSYLP
GeneTree:ENSGT00700000104438 EMBL:CABZ01050114 EMBL:CABZ01050115
EMBL:EU580407 IPI:IPI00632106 UniGene:Dr.93570 STRING:B2LT56
Ensembl:ENSDART00000062803 Uniprot:B2LT56
Length = 285
Score = 125 (49.1 bits), Expect = 8.9e-05, P = 8.9e-05
Identities = 34/114 (29%), Positives = 58/114 (50%)
Query: 57 PSVVGRIREEEFESRSGSDNVEGASGDD--QEANEDG---PPRKKKYHRHTPH----QIQ 107
P RE + S S + E A + ++ ++DG P+KKK R H Q+Q
Sbjct: 12 PRSASSTRETLENTSSESSDTEAAEKERSVEQRSDDGNADDPKKKKQRRQRTHFTSQQLQ 71
Query: 108 ELESFFKECPHPDEKQRSELSRRLGLESKQIKFWFQNRRTQMKTQMERHENIIL 161
ELE+ F+ +PD R E++ L +++ WF+NRR + + + ER++ + L
Sbjct: 72 ELEATFQRNRYPDMSTREEIAVWTNLTEARVRVWFKNRRAKWRKR-ERNQQMDL 124
>UNIPROTKB|E1BBM6 [details] [associations]
symbol:VAX2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0060041 "retina
development in camera-type eye" evidence=IEA] [GO:0048048
"embryonic eye morphogenesis" evidence=IEA] [GO:0031490 "chromatin
DNA binding" evidence=IEA] [GO:0030900 "forebrain development"
evidence=IEA] [GO:0009950 "dorsal/ventral axis specification"
evidence=IEA] [GO:0007409 "axonogenesis" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0000976 "transcription regulatory
region sequence-specific DNA binding" evidence=IEA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0005737
GO:GO:0030900 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0000122 GO:GO:0060041
GO:GO:0007409 GO:GO:0048048 GO:GO:0000976 GO:GO:0031490
GO:GO:0009950 GeneTree:ENSGT00680000099870 KO:K09318 CTD:25806
OMA:LGEADHC EMBL:DAAA02030410 EMBL:DAAA02030411 IPI:IPI00689758
RefSeq:NP_001179242.1 UniGene:Bt.106472 Ensembl:ENSBTAT00000014023
GeneID:539808 KEGG:bta:539808 NextBio:20878236 Uniprot:E1BBM6
Length = 286
Score = 125 (49.1 bits), Expect = 8.9e-05, P = 8.9e-05
Identities = 26/66 (39%), Positives = 37/66 (56%)
Query: 90 DGPPRKKKYHRHTPHQIQELESFFKECPHPDEKQRSELSRRLGLESKQIKFWFQNRRTQM 149
D P R + T Q+ LE F+ C + ++R+EL+R+L L Q+K WFQNRRT+
Sbjct: 97 DRPKRTRT--SFTAEQLYRLEMEFQRCQYVVGRERTELARQLNLSETQVKVWFQNRRTKQ 154
Query: 150 KTQMER 155
K R
Sbjct: 155 KKDQSR 160
>TAIR|locus:2102107 [details] [associations]
symbol:HB20 "homeobox protein 20" species:3702
"Arabidopsis thaliana" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=ISM;IEA;ISS] [GO:0006355 "regulation
of transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0009733 "response
to auxin stimulus" evidence=IEP] [GO:0000041 "transition metal ion
transport" evidence=RCA] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR003106 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 Pfam:PF02183 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0009733 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0000976 KO:K09338
HOGENOM:HOG000006025 EMBL:AC008261 EMBL:AK228890 EMBL:BT029221
EMBL:AY087631 IPI:IPI00546192 RefSeq:NP_186771.1 UniGene:At.41313
HSSP:P14859 ProteinModelPortal:Q8LAT0 SMR:Q8LAT0 IntAct:Q8LAT0
PaxDb:Q8LAT0 PRIDE:Q8LAT0 EnsemblPlants:AT3G01220.1 GeneID:821232
KEGG:ath:AT3G01220 GeneFarm:3967 TAIR:At3g01220 eggNOG:NOG328135
InParanoid:Q8LAT0 OMA:SDINLEM PhylomeDB:Q8LAT0
ProtClustDB:CLSN2684985 Genevestigator:Q8LAT0 Uniprot:Q8LAT0
Length = 286
Score = 125 (49.1 bits), Expect = 8.9e-05, P = 8.9e-05
Identities = 34/116 (29%), Positives = 66/116 (56%)
Query: 83 DDQEANEDGPPRK--KKYHRHTPHQIQELESFFKECPHPDEKQRSELSRRLGLESKQIKF 140
D++ ++DG +K R Q++ LE F+ + +++ +L++ LG++ +QI
Sbjct: 71 DEENLSDDGAHTMLGEKKKRLQLEQVKALEKSFELGNKLEPERKIQLAKALGMQPRQIAI 130
Query: 141 WFQNRRTQMKT-QMERHENIILRQEHDKLRAEN--------EMLKD--AMKNPTCN 185
WFQNRR + KT Q+ER + L+++ + L+++N ++L + A+KN CN
Sbjct: 131 WFQNRRARWKTRQLERDYDS-LKKQFESLKSDNASLLAYNKKLLAEVMALKNKECN 185
>UNIPROTKB|Q9BQY4 [details] [associations]
symbol:RHOXF2 "Rhox homeobox family member 2" species:9606
"Homo sapiens" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 UniGene:Hs.567620 HPA:HPA003314 eggNOG:NOG259605
HOGENOM:HOG000154119 HOVERGEN:HBG094802 OrthoDB:EOG4Q84ZH
EMBL:AF317219 EMBL:AL590526 EMBL:AK058125 EMBL:BC021719
IPI:IPI00032523 RefSeq:NP_115887.1 ProteinModelPortal:Q9BQY4
SMR:Q9BQY4 IntAct:Q9BQY4 MINT:MINT-1435872 STRING:Q9BQY4
DMDM:37537987 PaxDb:Q9BQY4 PeptideAtlas:Q9BQY4 PRIDE:Q9BQY4
DNASU:84528 Ensembl:ENST00000371388 GeneID:84528 KEGG:hsa:84528
UCSC:uc004esj.4 CTD:84528 GeneCards:GC0XP119292 H-InvDB:HIX0056374
HGNC:HGNC:30011 MIM:300447 neXtProt:NX_Q9BQY4 PharmGKB:PA162401288
InParanoid:Q9BQY4 OMA:WGHSHSS GenomeRNAi:84528 NextBio:74363
Bgee:Q9BQY4 CleanEx:HS_RHOXF2 Genevestigator:Q9BQY4
GermOnline:ENSG00000131721 Uniprot:Q9BQY4
Length = 288
Score = 125 (49.1 bits), Expect = 9.1e-05, P = 9.1e-05
Identities = 35/117 (29%), Positives = 55/117 (47%)
Query: 59 VVGRIREEEFESRSGSD-NVEGASGDDQEAN-------------EDGPPRKKKYHRHTPH 104
V G + E + E SGSD NVE + ++E E G ++ H TP
Sbjct: 85 VPGHLWEGDLEGTSGSDGNVEDSDQSEKEPGQQYSRPQGAVGGLEPGNAQQPNVHAFTPL 144
Query: 105 QIQELESFFKECPHPDEKQRSELSRRLGLESKQIKFWFQNRRTQMKTQMERHENIIL 161
Q+QELE F+ P E R L+R + + ++ WF+NRR + + RH+ ++
Sbjct: 145 QLQELERIFQREQFPSEFLRRRLARSMNVTELAVQIWFENRRAKWR----RHQRALM 197
>UNIPROTKB|F1NH36 [details] [associations]
symbol:Gga.55791 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0007389 "pattern specification process"
evidence=IEA] [GO:0021854 "hypothalamus development" evidence=IEA]
[GO:0043010 "camera-type eye development" evidence=IEA] [GO:0060173
"limb development" evidence=IEA] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0007275 GO:GO:0005634
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
InterPro:IPR003654 Pfam:PF03826 PROSITE:PS50803
GeneTree:ENSGT00700000104256 EMBL:AADN02057236 EMBL:AADN02063546
IPI:IPI00822313 Ensembl:ENSGALT00000021906 OMA:MVDDSCL
ArrayExpress:F1NH36 Uniprot:F1NH36
Length = 262
Score = 124 (48.7 bits), Expect = 9.2e-05, P = 9.2e-05
Identities = 30/102 (29%), Positives = 53/102 (51%)
Query: 87 ANEDGPPRKKKYHR--HTPHQIQELESFFKECPHPDEKQRSELSRRLGLESKQIKFWFQN 144
A E+ P +K + +R T +Q+ ELE F++ +PD R EL+ ++ L +++ WFQN
Sbjct: 61 AEEEQPKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAMKVNLPEVRVQVWFQN 120
Query: 145 RRTQMKTQMERHENIILRQEHDKLRAENEMLKDAMKNPTCNN 186
RR + + Q E+ E ++ + + N A P N+
Sbjct: 121 RRAKWRRQ-EKMEASSMKLHDTPMLSFNRPPMTANVGPMSNS 161
>UNIPROTKB|Q9UIW0 [details] [associations]
symbol:VAX2 "Ventral anterior homeobox 2" species:9606
"Homo sapiens" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0016055 "Wnt receptor signaling pathway"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0007409 "axonogenesis" evidence=IEA]
[GO:0009950 "dorsal/ventral axis specification" evidence=IEA]
[GO:0031490 "chromatin DNA binding" evidence=IEA] [GO:0048048
"embryonic eye morphogenesis" evidence=IEA] [GO:0060041 "retina
development in camera-type eye" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0030900 "forebrain development" evidence=ISS]
[GO:0007398 "ectoderm development" evidence=TAS] [GO:0007601
"visual perception" evidence=TAS] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0005737 EMBL:CH471053
GO:GO:0016055 GO:GO:0007601 GO:GO:0030900 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0000122 GO:GO:0060041 GO:GO:0007409
GO:GO:0048048 GO:GO:0000976 GO:GO:0007398 GO:GO:0031490
GO:GO:0009950 eggNOG:NOG309408 HOGENOM:HOG000049217
HOVERGEN:HBG007558 KO:K09318 OrthoDB:EOG4QVCD6 CTD:25806
EMBL:Y17791 EMBL:BT007035 EMBL:BC006336 IPI:IPI00018903
RefSeq:NP_036608.1 UniGene:Hs.249170 ProteinModelPortal:Q9UIW0
SMR:Q9UIW0 STRING:Q9UIW0 PhosphoSite:Q9UIW0 DMDM:20532295
PaxDb:Q9UIW0 PRIDE:Q9UIW0 DNASU:25806 Ensembl:ENST00000234392
GeneID:25806 KEGG:hsa:25806 UCSC:uc002shh.3 GeneCards:GC02P071127
HGNC:HGNC:12661 MIM:604295 neXtProt:NX_Q9UIW0 PharmGKB:PA37284
InParanoid:Q9UIW0 OMA:LGEADHC PhylomeDB:Q9UIW0 GenomeRNAi:25806
NextBio:47023 ArrayExpress:Q9UIW0 Bgee:Q9UIW0 CleanEx:HS_VAX2
Genevestigator:Q9UIW0 GermOnline:ENSG00000116035 Uniprot:Q9UIW0
Length = 290
Score = 125 (49.1 bits), Expect = 9.3e-05, P = 9.3e-05
Identities = 26/66 (39%), Positives = 37/66 (56%)
Query: 90 DGPPRKKKYHRHTPHQIQELESFFKECPHPDEKQRSELSRRLGLESKQIKFWFQNRRTQM 149
D P R + T Q+ LE F+ C + ++R+EL+R+L L Q+K WFQNRRT+
Sbjct: 100 DRPKRTRT--SFTAEQLYRLEMEFQRCQYVVGRERTELARQLNLSETQVKVWFQNRRTKQ 157
Query: 150 KTQMER 155
K R
Sbjct: 158 KKDQSR 163
>UNIPROTKB|F1PUR9 [details] [associations]
symbol:DUXA "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 Pfam:PF00046 PRINTS:PR00031
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0000976 OMA:PGYATKQ
EMBL:AAEX03000701 Ensembl:ENSCAFT00000003829
GeneTree:ENSGT00610000085975 Uniprot:F1PUR9
Length = 163
Score = 114 (45.2 bits), Expect = 9.3e-05, P = 9.3e-05
Identities = 26/96 (27%), Positives = 47/96 (48%)
Query: 62 RIREEEFESRSGSDNVEGASGDDQEANEDGPPRKKKYHR--HTPHQIQELESFFKECPHP 119
R + + +S D +S D E+ P R+ + R +T Q+ L F P+P
Sbjct: 66 RRARHQCQKKSEPDEDLESSQDQDYPEEEIPSREDRRCRTSYTSSQLHTLIEAFTNNPYP 125
Query: 120 DEKQRSELSRRLGLESKQIKFWFQNRRTQMKTQMER 155
R +L++ +G+ +++ WFQNRR++ Q +R
Sbjct: 126 GIDTREQLAKEIGIPESRVQIWFQNRRSRFHVQRKR 161
>MGI|MGI:1346018 [details] [associations]
symbol:Vax2 "ventral anterior homeobox containing gene 2"
species:10090 "Mus musculus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IGI]
[GO:0000976 "transcription regulatory region sequence-specific DNA
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0007409
"axonogenesis" evidence=IMP] [GO:0009950 "dorsal/ventral axis
specification" evidence=IMP] [GO:0016055 "Wnt receptor signaling
pathway" evidence=IEA] [GO:0030900 "forebrain development"
evidence=IMP] [GO:0031490 "chromatin DNA binding" evidence=IDA]
[GO:0043010 "camera-type eye development" evidence=IGI] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0048048
"embryonic eye morphogenesis" evidence=IDA;IMP] [GO:0060041 "retina
development in camera-type eye" evidence=IDA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 MGI:MGI:1346018 GO:GO:0005634 GO:GO:0005737
GO:GO:0016055 GO:GO:0030900 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0000122 GO:GO:0060041 GO:GO:0007409 GO:GO:0048048
GO:GO:0000976 GO:GO:0031490 GO:GO:0009950 eggNOG:NOG309408
GeneTree:ENSGT00680000099870 HOGENOM:HOG000049217
HOVERGEN:HBG007558 KO:K09318 OrthoDB:EOG4QVCD6 CTD:25806
OMA:LGEADHC EMBL:AB020498 EMBL:Y17792 EMBL:AF028715 IPI:IPI00123684
RefSeq:NP_036042.1 UniGene:Mm.307165 ProteinModelPortal:Q9WTP9
SMR:Q9WTP9 STRING:Q9WTP9 PhosphoSite:Q9WTP9 PRIDE:Q9WTP9
Ensembl:ENSMUST00000037807 GeneID:24113 KEGG:mmu:24113
InParanoid:Q9WTP9 NextBio:304143 Bgee:Q9WTP9 CleanEx:MM_VAX2
Genevestigator:Q9WTP9 GermOnline:ENSMUSG00000034777 Uniprot:Q9WTP9
Length = 292
Score = 125 (49.1 bits), Expect = 9.4e-05, P = 9.4e-05
Identities = 26/66 (39%), Positives = 37/66 (56%)
Query: 90 DGPPRKKKYHRHTPHQIQELESFFKECPHPDEKQRSELSRRLGLESKQIKFWFQNRRTQM 149
D P R + T Q+ LE F+ C + ++R+EL+R+L L Q+K WFQNRRT+
Sbjct: 100 DRPKRTRT--SFTAEQLYRLEMEFQRCQYVVGRERTELARQLNLSETQVKVWFQNRRTKQ 157
Query: 150 KTQMER 155
K R
Sbjct: 158 KKDQSR 163
>RGD|621133 [details] [associations]
symbol:Vax2 "ventral anterior homeobox 2" species:10116 "Rattus
norvegicus" [GO:0000122 "negative regulation of transcription from
RNA polymerase II promoter" evidence=IEA;ISO] [GO:0000976
"transcription regulatory region sequence-specific DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA;ISO] [GO:0005737 "cytoplasm" evidence=IEA;ISO]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0007409 "axonogenesis" evidence=IEA;ISO] [GO:0009950
"dorsal/ventral axis specification" evidence=IEA;ISO] [GO:0016055
"Wnt receptor signaling pathway" evidence=IEA] [GO:0030900
"forebrain development" evidence=IEA;ISO;ISS] [GO:0031490
"chromatin DNA binding" evidence=IEA;ISO] [GO:0043010 "camera-type
eye development" evidence=ISO] [GO:0048048 "embryonic eye
morphogenesis" evidence=IEA;ISO] [GO:0060041 "retina development in
camera-type eye" evidence=IEA;ISO] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 RGD:621133 GO:GO:0005634 GO:GO:0005737 GO:GO:0016055
GO:GO:0030900 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0000122
GO:GO:0060041 GO:GO:0007409 GO:GO:0048048 GO:GO:0000976
GO:GO:0031490 GO:GO:0009950 eggNOG:NOG309408 HOGENOM:HOG000049217
HOVERGEN:HBG007558 KO:K09318 OrthoDB:EOG4QVCD6 CTD:25806
EMBL:AF113516 IPI:IPI00204233 RefSeq:NP_072159.1 UniGene:Rn.48765
ProteinModelPortal:Q9JLZ9 GeneID:64572 KEGG:rno:64572
UCSC:RGD:621133 InParanoid:Q9JLZ9 NextBio:613528
Genevestigator:Q9JLZ9 GermOnline:ENSRNOG00000013261 Uniprot:Q9JLZ9
Length = 292
Score = 125 (49.1 bits), Expect = 9.4e-05, P = 9.4e-05
Identities = 26/66 (39%), Positives = 37/66 (56%)
Query: 90 DGPPRKKKYHRHTPHQIQELESFFKECPHPDEKQRSELSRRLGLESKQIKFWFQNRRTQM 149
D P R + T Q+ LE F+ C + ++R+EL+R+L L Q+K WFQNRRT+
Sbjct: 100 DRPKRTRT--SFTAEQLYRLEMEFQRCQYVVGRERTELARQLNLSETQVKVWFQNRRTKQ 157
Query: 150 KTQMER 155
K R
Sbjct: 158 KKDQSR 163
>UNIPROTKB|Q9JLZ9 [details] [associations]
symbol:Vax2 "Ventral anterior homeobox 2" species:10116
"Rattus norvegicus" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 RGD:621133 GO:GO:0005634
GO:GO:0005737 GO:GO:0016055 GO:GO:0030900 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0000122 GO:GO:0060041 GO:GO:0007409
GO:GO:0048048 GO:GO:0000976 GO:GO:0031490 GO:GO:0009950
eggNOG:NOG309408 HOGENOM:HOG000049217 HOVERGEN:HBG007558 KO:K09318
OrthoDB:EOG4QVCD6 CTD:25806 EMBL:AF113516 IPI:IPI00204233
RefSeq:NP_072159.1 UniGene:Rn.48765 ProteinModelPortal:Q9JLZ9
GeneID:64572 KEGG:rno:64572 UCSC:RGD:621133 InParanoid:Q9JLZ9
NextBio:613528 Genevestigator:Q9JLZ9 GermOnline:ENSRNOG00000013261
Uniprot:Q9JLZ9
Length = 292
Score = 125 (49.1 bits), Expect = 9.4e-05, P = 9.4e-05
Identities = 26/66 (39%), Positives = 37/66 (56%)
Query: 90 DGPPRKKKYHRHTPHQIQELESFFKECPHPDEKQRSELSRRLGLESKQIKFWFQNRRTQM 149
D P R + T Q+ LE F+ C + ++R+EL+R+L L Q+K WFQNRRT+
Sbjct: 100 DRPKRTRT--SFTAEQLYRLEMEFQRCQYVVGRERTELARQLNLSETQVKVWFQNRRTKQ 157
Query: 150 KTQMER 155
K R
Sbjct: 158 KKDQSR 163
>MGI|MGI:1859288 [details] [associations]
symbol:Barhl1 "BarH-like 1 (Drosophila)" species:10090 "Mus
musculus" [GO:0001077 "RNA polymerase II core promoter proximal
region sequence-specific DNA binding transcription factor activity
involved in positive regulation of transcription" evidence=IDA]
[GO:0001764 "neuron migration" evidence=IMP] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0007605 "sensory perception of
sound" evidence=IMP] [GO:0030901 "midbrain development"
evidence=IMP] [GO:0043524 "negative regulation of neuron apoptotic
process" evidence=IMP] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IDA] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 MGI:MGI:1859288 GO:GO:0005634
GO:GO:0001764 GO:GO:0043565 GO:GO:0043524 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0001077
GO:GO:0007605 GO:GO:0030901 GeneTree:ENSGT00700000104206
eggNOG:NOG263484 KO:K09360 CTD:56751 HOGENOM:HOG000231533
HOVERGEN:HBG050663 OMA:DCLETGA OrthoDB:EOG4F4SBJ EMBL:AJ237590
EMBL:AB043980 EMBL:AF264026 EMBL:BC055731 IPI:IPI00122197
RefSeq:NP_001157658.1 RefSeq:NP_062319.1 UniGene:Mm.21390
ProteinModelPortal:P63157 SMR:P63157 STRING:P63157
PhosphoSite:P63157 PRIDE:P63157 Ensembl:ENSMUST00000050776
Ensembl:ENSMUST00000113847 Ensembl:ENSMUST00000113849 GeneID:54422
KEGG:mmu:54422 InParanoid:P63157 NextBio:311296 Bgee:P63157
CleanEx:MM_BARHL1 Genevestigator:P63157
GermOnline:ENSMUSG00000026805 Uniprot:P63157
Length = 327
Score = 126 (49.4 bits), Expect = 9.4e-05, P = 9.4e-05
Identities = 45/148 (30%), Positives = 67/148 (45%)
Query: 12 SRVVAEIFPHCHSMASGAIAQFPLSLSIKNAMD--AGEMGL-IGEQF----DPSVVGRIR 64
S ++ +I C +A+ A P S S + A G + GE F D SV
Sbjct: 95 SFLIRDILADCKPLAACA----PYSSSGQPAAPEPGGRLAAKAGEDFRDKLDKSVSSASS 150
Query: 65 EEEFESRSGSDNVEGASGDDQEANEDGPPRKKKYHRHTPHQIQELESFFKECPHPDEKQR 124
+ E++ + D E +S D PRK + T HQ+ +LE F+ + + R
Sbjct: 151 DSEYKVKEEGDR-EISSSRDSPPVRLKKPRKART-AFTDHQLAQLERSFERQKYLSVQDR 208
Query: 125 SELSRRLGLESKQIKFWFQNRRTQMKTQ 152
EL+ L L Q+K W+QNRRT+ K Q
Sbjct: 209 MELAASLNLTDTQVKTWYQNRRTKWKRQ 236
>RGD|620648 [details] [associations]
symbol:Barhl1 "BarH-like homeobox 1" species:10116 "Rattus
norvegicus" [GO:0001077 "RNA polymerase II core promoter proximal
region sequence-specific DNA binding transcription factor activity
involved in positive regulation of transcription" evidence=IEA;ISO]
[GO:0001764 "neuron migration" evidence=IEA;ISO] [GO:0005634
"nucleus" evidence=IEA;ISO] [GO:0007605 "sensory perception of
sound" evidence=IEA;ISO] [GO:0030901 "midbrain development"
evidence=IEA;ISO] [GO:0043524 "negative regulation of neuron
apoptotic process" evidence=IEA;ISO] [GO:0043565 "sequence-specific
DNA binding" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=ISO]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
RGD:620648 GO:GO:0005634 GO:GO:0001764 GO:GO:0043565 GO:GO:0043524
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0001077 GO:GO:0007605 GO:GO:0030901
GeneTree:ENSGT00700000104206 eggNOG:NOG263484 KO:K09360 CTD:56751
HOGENOM:HOG000231533 HOVERGEN:HBG050663 OMA:DCLETGA
OrthoDB:EOG4F4SBJ EMBL:AB043981 IPI:IPI00201978 RefSeq:NP_476450.1
UniGene:Rn.162655 ProteinModelPortal:P63156 SMR:P63156
Ensembl:ENSRNOT00000017725 GeneID:117232 KEGG:rno:117232
UCSC:RGD:620648 InParanoid:P63156 NextBio:620058
Genevestigator:P63156 GermOnline:ENSRNOG00000013209 Uniprot:P63156
Length = 327
Score = 126 (49.4 bits), Expect = 9.4e-05, P = 9.4e-05
Identities = 45/148 (30%), Positives = 67/148 (45%)
Query: 12 SRVVAEIFPHCHSMASGAIAQFPLSLSIKNAMD--AGEMGL-IGEQF----DPSVVGRIR 64
S ++ +I C +A+ A P S S + A G + GE F D SV
Sbjct: 95 SFLIRDILADCKPLAACA----PYSSSGQPAAPEPGGRLAAKAGEDFRDKLDKSVSSASS 150
Query: 65 EEEFESRSGSDNVEGASGDDQEANEDGPPRKKKYHRHTPHQIQELESFFKECPHPDEKQR 124
+ E++ + D E +S D PRK + T HQ+ +LE F+ + + R
Sbjct: 151 DSEYKVKEEGDR-EISSSRDSPPVRLKKPRKART-AFTDHQLAQLERSFERQKYLSVQDR 208
Query: 125 SELSRRLGLESKQIKFWFQNRRTQMKTQ 152
EL+ L L Q+K W+QNRRT+ K Q
Sbjct: 209 MELAASLNLTDTQVKTWYQNRRTKWKRQ 236
>UNIPROTKB|Q9YH13 [details] [associations]
symbol:HOXC8 "Homeobox protein Hox-C8" species:9031 "Gallus
gallus" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
GO:GO:0007275 GO:GO:0005634 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0000976 HOVERGEN:HBG016849 KO:K09308 EMBL:X94179
IPI:IPI00581117 RefSeq:NP_990224.1 UniGene:Gga.413
ProteinModelPortal:Q9YH13 SMR:Q9YH13 GeneID:395711 KEGG:gga:395711
CTD:3224 NextBio:20815781 Uniprot:Q9YH13
Length = 242
Score = 123 (48.4 bits), Expect = 9.5e-05, P = 9.5e-05
Identities = 52/181 (28%), Positives = 83/181 (45%)
Query: 12 SRVVAEIFPH-CHSMASGAIAQFPLSLSIKNAMDAGEM---------GLIGEQFDPSVVG 61
S V E F H S+++ Q P +L+ DA + L G Q + +VV
Sbjct: 53 SHHVQEFFHHGTSSISNSGYQQNPCALACHG--DASKFYGYEALPRQSLYGAQQETTVV- 109
Query: 62 RIREEEFESRSGSDNVEGASGDDQEANED---------GPPRKKKYHRHTPHQIQELESF 112
+ + +S S S++ EG +Q ++ P R+ ++ +Q ELE
Sbjct: 110 --QYPDCKSSSNSNSSEGQGHLNQNSSPSLMFPWMRPHAPGRRSGRQTYSRYQTLELEKE 167
Query: 113 FKECPHPDEKQRSELSRRLGLESKQIKFWFQNRRTQMKTQMERHENIILRQEHDKLRAEN 172
F P+ K+R E+S LGL +Q+K WFQNRR MK + E +++ L D+ + E
Sbjct: 168 FLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRR--MKWKKENNKDK-LPGARDEEKTEE 224
Query: 173 E 173
E
Sbjct: 225 E 225
>UNIPROTKB|E2QRS0 [details] [associations]
symbol:HOXC8 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 GO:GO:0007275
GO:GO:0005634 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0000976
GeneTree:ENSGT00700000104054 EMBL:AAEX03014973 EMBL:AAEX03014974
Ensembl:ENSCAFT00000010684 Ensembl:ENSCAFT00000047496
NextBio:20892804 Uniprot:E2QRS0
Length = 242
Score = 123 (48.4 bits), Expect = 9.5e-05, P = 9.5e-05
Identities = 55/192 (28%), Positives = 87/192 (45%)
Query: 4 GSNSVGM--GSRVVAEIFPHCHS-MASGAIAQFPLSLSIKNAMDAGEM---------GLI 51
G ++ G S V + F H S ++S Q P SLS DA + L
Sbjct: 43 GGSAPGFQHASHHVQDFFHHGASGISSPGYQQNPCSLSCHG--DASKFYGYEALPRQSLY 100
Query: 52 GEQFDPSVVGRIREEEFESRSGSDNVEGASGDDQEANED---------GPPRKKKYHRHT 102
G Q + SVV + + +S + +++ EG +Q ++ P R+ ++
Sbjct: 101 GAQQEASVV---QYPDCKSSANTNSSEGQGHLNQNSSPSLMFPWMRPHAPGRRSGRQTYS 157
Query: 103 PHQIQELESFFKECPHPDEKQRSELSRRLGLESKQIKFWFQNRRTQMKTQMERHENIILR 162
+Q ELE F P+ K+R E+S LGL +Q+K WFQNRR + K + + + R
Sbjct: 158 RYQTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWKKENNKDKLPGAR 217
Query: 163 QEHDKLRAE-NE 173
E +K+ E NE
Sbjct: 218 DE-EKVEEEGNE 228
>UNIPROTKB|P31277 [details] [associations]
symbol:HOXD11 "Homeobox protein Hox-D11" species:9606 "Homo
sapiens" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0001656 "metanephros development" evidence=IEA] [GO:0001759
"organ induction" evidence=IEA] [GO:0009952 "anterior/posterior
pattern specification" evidence=IEA] [GO:0009954 "proximal/distal
pattern formation" evidence=IEA] [GO:0010720 "positive regulation
of cell development" evidence=IEA] [GO:0032332 "positive regulation
of chondrocyte differentiation" evidence=IEA] [GO:0042733
"embryonic digit morphogenesis" evidence=IEA] [GO:0048589
"developmental growth" evidence=IEA] [GO:0060272 "embryonic
skeletal joint morphogenesis" evidence=IEA] [GO:0060351 "cartilage
development involved in endochondral bone morphogenesis"
evidence=IEA] [GO:0005634 "nucleus" evidence=NAS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=NAS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=NAS] [GO:0001658 "branching involved in
ureteric bud morphogenesis" evidence=ISS] [GO:0009953
"dorsal/ventral pattern formation" evidence=ISS] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0009952
GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0032332
GO:GO:0048589 GO:GO:0009953 GO:GO:0009954 GO:GO:0042733
GO:GO:0001658 GO:GO:0001656 GO:GO:0001759 GO:GO:0060351
EMBL:AC009336 HOGENOM:HOG000231898 HOVERGEN:HBG052048 KO:K09296
GO:GO:0010720 InterPro:IPR021918 Pfam:PF12045 OrthoDB:EOG4KKZ3X
CTD:3237 EMBL:AF154915 IPI:IPI00305856 PIR:S14938
RefSeq:NP_067015.2 UniGene:Hs.421136 ProteinModelPortal:P31277
SMR:P31277 STRING:P31277 DMDM:223590220 PRIDE:P31277 DNASU:3237
Ensembl:ENST00000249504 GeneID:3237 KEGG:hsa:3237 UCSC:uc002uki.3
GeneCards:GC02P176936 HGNC:HGNC:5134 MIM:142986 neXtProt:NX_P31277
PharmGKB:PA29408 eggNOG:NOG305087 OMA:SPCTKAT GenomeRNAi:3237
NextBio:12883 ArrayExpress:P31277 Bgee:P31277 CleanEx:HS_HOXD11
Genevestigator:P31277 GermOnline:ENSG00000128713 Uniprot:P31277
Length = 338
Score = 126 (49.4 bits), Expect = 0.00010, P = 0.00010
Identities = 31/82 (37%), Positives = 49/82 (59%)
Query: 72 SGSDNV--EGASGDDQEANEDGPPR-KKKYHRHTPHQIQELESFFKECPHPDEKQRSELS 128
SG D G +G ++ ++ P R +KK +T +QI+ELE F + ++++R +LS
Sbjct: 241 SGGDGEGPPGEAGAEKSSSAVAPQRSRKKRCPYTKYQIRELEREFFFNVYINKEKRLQLS 300
Query: 129 RRLGLESKQIKFWFQNRRTQMK 150
R L L +Q+K WFQNRR + K
Sbjct: 301 RMLNLTDRQVKIWFQNRRMKEK 322
>UNIPROTKB|F1LV35 [details] [associations]
symbol:LOC100361016 "Protein LOC100361016" species:10116
"Rattus norvegicus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 GeneTree:ENSGT00390000000605
IPI:IPI00561949 Ensembl:ENSRNOT00000046416 Uniprot:F1LV35
Length = 302
Score = 125 (49.1 bits), Expect = 0.00010, P = 0.00010
Identities = 37/128 (28%), Positives = 59/128 (46%)
Query: 31 AQFPLSLSIKNAMDAGEMGLIGE----QFDPSVVGRIREEEFESRSGSDNVEGASGDDQE 86
+Q P + A G+ L+ Q PSV + + S ++ A D
Sbjct: 32 SQLPQEPAWNLAFQMGQSPLVTSRTPMQSSPSVPEQNLNWQESQGSSRESKPMALSDKYG 91
Query: 87 ANEDGP--PRKKKYHR--HTPHQIQELESFFKECPHPDEKQRSELSRRLGLESKQIKFWF 142
+ GP PRK++ R ++ Q L+ F EC +PD+KQ EL+ + + K+IK WF
Sbjct: 92 GKQTGPVAPRKRRKERTQYSAKQKSVLQEHFAECQYPDKKQCLELASLVRVTEKEIKVWF 151
Query: 143 QNRRTQMK 150
+N R + K
Sbjct: 152 KNNRAKCK 159
>ZFIN|ZDB-GENE-990415-111 [details] [associations]
symbol:hoxc11a "homeo box C11a" species:7955 "Danio
rerio" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
ZFIN:ZDB-GENE-990415-111 GO:GO:0007275 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 HOGENOM:HOG000231898
HOVERGEN:HBG052048 KO:K09296 InterPro:IPR021918 Pfam:PF12045
GeneTree:ENSGT00700000104263 eggNOG:NOG298161 OrthoDB:EOG4J3WHN
OMA:EEHTNSG EMBL:BC091858 EMBL:DQ060558 EMBL:AF071258 EMBL:Y14541
IPI:IPI00502457 RefSeq:NP_571240.1 UniGene:Dr.132200 HSSP:P09631
ProteinModelPortal:Q58EL0 SMR:Q58EL0 Ensembl:ENSDART00000103146
GeneID:30403 KEGG:dre:30403 CTD:30403 InParanoid:Q58EL0
NextBio:20806813 ArrayExpress:Q58EL0 Bgee:Q58EL0 Uniprot:Q58EL0
Length = 306
Score = 125 (49.1 bits), Expect = 0.00010, P = 0.00010
Identities = 31/88 (35%), Positives = 51/88 (57%)
Query: 65 EEEFESRSGS-DNVEGASGDDQEANEDGPPR-KKKYHRHTPHQIQELESFFKECPHPDEK 122
+EE + SGS + G+ +++ PR +KK ++ QI+ELE F + +++
Sbjct: 203 DEEEHTNSGSCTSAATKDGNASKSSHSSTPRTRKKRCPYSKFQIRELEREFFFNVYINKE 262
Query: 123 QRSELSRRLGLESKQIKFWFQNRRTQMK 150
+R +LSR L L +Q+K WFQNRR + K
Sbjct: 263 KRLQLSRMLNLTDRQVKIWFQNRRMKEK 290
>WB|WBGene00000430 [details] [associations]
symbol:ceh-5 species:6239 "Caenorhabditis elegans"
[GO:0000976 "transcription regulatory region sequence-specific DNA
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0007275 GO:GO:0005634 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0000976 EMBL:Z81036 PIR:S05706 PIR:T19335 RefSeq:NP_492586.2
ProteinModelPortal:P20269 SMR:P20269 EnsemblMetazoa:C16C2.1
GeneID:191616 KEGG:cel:CELE_C16C2.1 UCSC:C16C2.1 CTD:191616
WormBase:C16C2.1 eggNOG:NOG309408 GeneTree:ENSGT00680000099870
HOGENOM:HOG000017392 InParanoid:P20269 OMA:QNYWTAA NextBio:949690
Uniprot:P20269
Length = 134
Score = 105 (42.0 bits), Expect = 0.00011, P = 0.00011
Identities = 20/49 (40%), Positives = 29/49 (59%)
Query: 102 TPHQIQELESFFKECPHPDEKQRSELSRRLGLESKQIKFWFQNRRTQMK 150
T Q+++LE F + R++L+ LGL Q+K WFQNRRT+ K
Sbjct: 43 TDEQLEKLEESFNTSGYLSGSTRAKLAESLGLSDNQVKVWFQNRRTKQK 91
>UNIPROTKB|F1RK76 [details] [associations]
symbol:GSC2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0006357 "regulation
of transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
GO:GO:0006357 Gene3D:1.10.10.60 SUPFAM:SSF46689
GeneTree:ENSGT00700000104273 EMBL:CU618331
Ensembl:ENSSSCT00000011076 OMA:GRRAVQC Uniprot:F1RK76
Length = 217
Score = 121 (47.7 bits), Expect = 0.00011, P = 0.00011
Identities = 27/81 (33%), Positives = 45/81 (55%)
Query: 74 SDNVEGASGDDQEANEDGPPRKKKYHR--HTPHQIQELESFFKECPHPDEKQRSELSRRL 131
+ + EG SG A GP R+ + HR + Q+Q LE+ F + +PD R L+ R+
Sbjct: 117 ASSTEG-SGALPGAGSPGPQRRTRRHRTIFSEEQLQALEALFVQNQYPDVGTRERLAGRI 175
Query: 132 GLESKQIKFWFQNRRTQMKTQ 152
L ++++ WF+NRR + + Q
Sbjct: 176 RLREERVEVWFKNRRAKWRHQ 196
>UNIPROTKB|F1N0Z3 [details] [associations]
symbol:ESX1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0051726 "regulation
of cell cycle" evidence=IEA] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0005737 GO:GO:0045892 GO:GO:0043565
GO:GO:0003700 GO:GO:0006357 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0051726 GO:GO:0060716 GO:GO:0060713 OMA:MAPVPPW
GeneTree:ENSGT00530000063899 EMBL:DAAA02071417 IPI:IPI00695216
UniGene:Bt.54351 Ensembl:ENSBTAT00000007812 Uniprot:F1N0Z3
Length = 279
Score = 124 (48.7 bits), Expect = 0.00011, P = 0.00011
Identities = 33/96 (34%), Positives = 51/96 (53%)
Query: 69 ESRSGSDNVEGASGDDQ---EANEDGP-----PRKK--KYHR----HTPHQIQELESFFK 114
E+R+G +N EG GD + + E GP P+ K R T Q+ ELE F+
Sbjct: 86 ENRAGDENREGNGGDIEPPPQQEEPGPQAVQGPQNAAVKPRRCRTVFTQLQLLELERVFR 145
Query: 115 ECPHPDEKQRSELSRRLGLESKQIKFWFQNRRTQMK 150
+PD R +++RRL L ++++ WFQNRR + +
Sbjct: 146 RVQYPDVFAREDIARRLNLAERRVQVWFQNRRAKWR 181
>UNIPROTKB|P24342 [details] [associations]
symbol:HOXD11 "Homeobox protein Hox-D11" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0007275 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 HOVERGEN:HBG052048 KO:K09296
InterPro:IPR021918 Pfam:PF12045 EMBL:M81249 EMBL:D10288
IPI:IPI00583692 PIR:B37914 RefSeq:NP_989951.1 UniGene:Gga.958
ProteinModelPortal:P24342 SMR:P24342 STRING:P24342 GeneID:395328
KEGG:gga:395328 CTD:3237 eggNOG:NOG244779 NextBio:20815413
Uniprot:P24342
Length = 280
Score = 124 (48.7 bits), Expect = 0.00011, P = 0.00011
Identities = 30/88 (34%), Positives = 53/88 (60%)
Query: 64 REEEFESRSGSDNVEGASGDDQEANEDGPPR-KKKYHRHTPHQIQELESFFKECPHPDEK 122
+E++ + SG+ + G + ++ + P R +KK +T +QI+ELE F + +++
Sbjct: 177 QEKKVTTASGAASPPGEAVAEKSNSSAVPQRSRKKRCPYTKYQIRELEREFFFNVYINKE 236
Query: 123 QRSELSRRLGLESKQIKFWFQNRRTQMK 150
+R +LSR L L +Q+K WFQNRR + K
Sbjct: 237 KRLQLSRMLNLTDRQVKIWFQNRRMKEK 264
>UNIPROTKB|O42173 [details] [associations]
symbol:pv.1 "Homeobox protein pv.1" species:8355 "Xenopus
laevis" [GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IMP] [GO:0001707 "mesoderm
formation" evidence=IMP] [GO:0005634 "nucleus" evidence=IC]
[GO:0030509 "BMP signaling pathway" evidence=IMP] [GO:0043565
"sequence-specific DNA binding" evidence=IDA] [GO:0045606 "positive
regulation of epidermal cell differentiation" evidence=IMP]
[GO:0045647 "negative regulation of erythrocyte differentiation"
evidence=IMP] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IMP] [GO:0048264 "determination of ventral
identity" evidence=IMP] [GO:0050768 "negative regulation of
neurogenesis" evidence=IMP] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0000122 GO:GO:0030509 GO:GO:0001707 GO:GO:0048264
GO:GO:0050768 HSSP:P06602 GO:GO:0045647 EMBL:AF012925
RefSeq:NP_001081704.1 UniGene:Xl.1420 ProteinModelPortal:O42173
GeneID:398007 KEGG:xla:398007 CTD:398007 Xenbase:XB-GENE-920512
HOVERGEN:HBG082072 GO:GO:0045606 Uniprot:O42173
Length = 282
Score = 124 (48.7 bits), Expect = 0.00011, P = 0.00011
Identities = 41/131 (31%), Positives = 61/131 (46%)
Query: 46 GEMGLIGEQFDPSVVGRIRE----EEFES-RSGSDNVEGASG---DDQEANED--GPPRK 95
GE G + PS R ++F S S D+ EG+ + QE D G K
Sbjct: 66 GEQGKKLQYSSPSSAALHRSWGSSDDFSSVGSEDDSTEGSPSPMRNSQETETDHRGESPK 125
Query: 96 KKYHRH-----TPHQIQELESFFKECPHPDEKQRSELSRRLGLESKQIKFWFQNRRTQMK 150
RH TP QI +LE F + + +R +L+ L L Q+K WFQNRR ++K
Sbjct: 126 SDLQRHLRTAFTPQQISKLEQAFNKQRYLGASERKKLATSLRLSEIQVKTWFQNRRMKLK 185
Query: 151 TQME-RHENII 160
Q++ + N++
Sbjct: 186 RQIQDQQHNMV 196
>UNIPROTKB|E1C654 [details] [associations]
symbol:VAX1 "Ventral anterior homeobox 1" species:9031
"Gallus gallus" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0000976 GeneTree:ENSGT00680000099870 EMBL:AADN02030950
EMBL:AADN02030951 EMBL:AADN02030952 IPI:IPI00682449
Ensembl:ENSGALT00000033072 Uniprot:E1C654
Length = 219
Score = 121 (47.7 bits), Expect = 0.00011, P = 0.00011
Identities = 25/61 (40%), Positives = 36/61 (59%)
Query: 90 DGPPRKKKYHRHTPHQIQELESFFKECPHPDEKQRSELSRRLGLESKQIKFWFQNRRTQM 149
D P R + T Q+ LE F+ C + ++R+EL+R+L L Q+K WFQNRRT+
Sbjct: 97 DRPKRTRT--SFTAEQLYRLEMEFQRCQYVVGRERTELARQLNLSETQVKVWFQNRRTKQ 154
Query: 150 K 150
K
Sbjct: 155 K 155
>RGD|69253 [details] [associations]
symbol:Pitx1 "paired-like homeodomain 1" species:10116 "Rattus
norvegicus" [GO:0000988 "protein binding transcription factor
activity" evidence=IEA;ISO] [GO:0001501 "skeletal system
development" evidence=ISO] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IMP] [GO:0005634
"nucleus" evidence=ISO] [GO:0005667 "transcription factor complex"
evidence=IEA;ISO] [GO:0005730 "nucleolus" evidence=IEA;ISO]
[GO:0005737 "cytoplasm" evidence=IEA;ISO] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355 "regulation
of transcription, DNA-dependent" evidence=IMP] [GO:0014707
"branchiomeric skeletal muscle development" evidence=IEA;ISO]
[GO:0021983 "pituitary gland development" evidence=IEA;ISO]
[GO:0035116 "embryonic hindlimb morphogenesis" evidence=IEA;ISO]
[GO:0035137 "hindlimb morphogenesis" evidence=ISO] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA;ISO] [GO:0048625 "myoblast cell fate commitment"
evidence=IEA;ISO] [GO:0051216 "cartilage development"
evidence=IEA;ISO] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR016233 InterPro:IPR017970 Pfam:PF00046 PIRSF:PIRSF000563
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 RGD:69253
GO:GO:0005737 GO:GO:0005730 GO:GO:0043565 GO:GO:0045944
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0005667 GO:GO:0051216 GO:GO:0035116 GO:GO:0021983
InterPro:IPR003654 Pfam:PF03826 PROSITE:PS50803 GO:GO:0000988
GO:GO:0048625 GO:GO:0014707 eggNOG:NOG249113 HOGENOM:HOG000273886
HOVERGEN:HBG068770 OrthoDB:EOG4R503Q CTD:5307 KO:K09356 OMA:CKNSYLP
EMBL:AB047298 EMBL:BC061966 IPI:IPI00198722 RefSeq:NP_446076.1
UniGene:Rn.74248 ProteinModelPortal:Q99NA7 SMR:Q99NA7 STRING:Q99NA7
Ensembl:ENSRNOT00000015307 GeneID:113983 KEGG:rno:113983
UCSC:RGD:69253 GeneTree:ENSGT00700000104438 InParanoid:Q99NA7
NextBio:618121 Genevestigator:Q99NA7 GermOnline:ENSRNOG00000011423
Uniprot:Q99NA7
Length = 315
Score = 125 (49.1 bits), Expect = 0.00011, P = 0.00011
Identities = 30/99 (30%), Positives = 52/99 (52%)
Query: 69 ESRSGSDNV--EGASGDDQEANEDGPPRKKKYHRHTPH----QIQELESFFKECPHPDEK 122
+ R G V +G +G + + P +KKK R H Q+QELE+ F+ +PD
Sbjct: 58 KERGGEAKVPEDGGAGSAGCGSAEDPAKKKKQRRQRTHFTSQQLQELEATFQRNRYPDMS 117
Query: 123 QRSELSRRLGLESKQIKFWFQNRRTQMKTQMERHENIIL 161
R E++ L +++ WF+NRR + + + ER++ + L
Sbjct: 118 MREEIAVWTNLTEPRVRVWFKNRRAKWRKR-ERNQQLDL 155
>UNIPROTKB|F8VSA3 [details] [associations]
symbol:HOXD8 "Homeobox protein Hox-D8" species:9606 "Homo
sapiens" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 GO:GO:0007275 GO:GO:0005634
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 EMBL:AC009336 IPI:IPI01018181
HGNC:HGNC:5139 ProteinModelPortal:F8VSA3 SMR:F8VSA3
Ensembl:ENST00000548663 ArrayExpress:F8VSA3 Bgee:F8VSA3
Uniprot:F8VSA3
Length = 186
Score = 118 (46.6 bits), Expect = 0.00011, P = 0.00011
Identities = 26/73 (35%), Positives = 40/73 (54%)
Query: 92 PPRKKKYHRHTPHQIQELESFFKECPHPDEKQRSELSRRLGLESKQIKFWFQNRRTQMKT 151
P R++ ++ Q ELE F P+ K+R E+S L L +Q+K WFQNRR + K
Sbjct: 91 PGRRRGRQTYSRFQTLELEKEFLFNPYLTRKRRIEVSHALALTERQVKIWFQNRRMKWKK 150
Query: 152 QMERHENIILRQE 164
+ + + + RQE
Sbjct: 151 ENNKDKFPVSRQE 163
>UNIPROTKB|F1P5G0 [details] [associations]
symbol:VAX1 "Ventral anterior homeobox 1" species:9031
"Gallus gallus" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0000976 GeneTree:ENSGT00680000099870 EMBL:AADN02030950
EMBL:AADN02030951 EMBL:AADN02030952 IPI:IPI01017344
Ensembl:ENSGALT00000015072 Uniprot:F1P5G0
Length = 220
Score = 121 (47.7 bits), Expect = 0.00011, P = 0.00011
Identities = 25/61 (40%), Positives = 36/61 (59%)
Query: 90 DGPPRKKKYHRHTPHQIQELESFFKECPHPDEKQRSELSRRLGLESKQIKFWFQNRRTQM 149
D P R + T Q+ LE F+ C + ++R+EL+R+L L Q+K WFQNRRT+
Sbjct: 97 DRPKRTRT--SFTAEQLYRLEMEFQRCQYVVGRERTELARQLNLSETQVKVWFQNRRTKQ 154
Query: 150 K 150
K
Sbjct: 155 K 155
>WB|WBGene00020485 [details] [associations]
symbol:ceh-54 species:6239 "Caenorhabditis elegans"
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 EMBL:FO080546 HSSP:P06601
GeneTree:ENSGT00700000104256 PIR:T16866 RefSeq:NP_509037.1
UniGene:Cel.367 ProteinModelPortal:Q22459 SMR:Q22459 DIP:DIP-24677N
IntAct:Q22459 MINT:MINT-1110113 EnsemblMetazoa:T13C5.4
GeneID:188474 KEGG:cel:CELE_T13C5.4 UCSC:T13C5.4 CTD:188474
WormBase:T13C5.4 eggNOG:NOG295926 HOGENOM:HOG000020434
InParanoid:Q22459 OMA:ATRDSEN NextBio:938936 Uniprot:Q22459
Length = 220
Score = 121 (47.7 bits), Expect = 0.00011, P = 0.00011
Identities = 24/73 (32%), Positives = 44/73 (60%)
Query: 85 QEANEDGPPRKKKYHRHT--PHQIQELESFFKECPHPDEKQRSELSRRLGLESKQIKFWF 142
+ +N P RKK+ +R T +QI E+E F E +PD R +L+ ++ L ++++ WF
Sbjct: 34 KRSNNFNPDRKKR-NRITFDANQIDEMEKVFAENQYPDTMSREKLANKIQLHEERVQIWF 92
Query: 143 QNRRTQMKTQMER 155
QNRR + + + ++
Sbjct: 93 QNRRAKYRREQKQ 105
>ZFIN|ZDB-GENE-980528-2060 [details] [associations]
symbol:gsc "goosecoid" species:7955 "Danio rerio"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0009950
"dorsal/ventral axis specification" evidence=IEP] [GO:0007420
"brain development" evidence=IGI] [GO:0021999 "neural plate
anterior/posterior regionalization" evidence=IGI] [GO:0009953
"dorsal/ventral pattern formation" evidence=IGI;IDA] [GO:0009948
"anterior/posterior axis specification" evidence=IDA] [GO:0007275
"multicellular organismal development" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
ZFIN:ZDB-GENE-980528-2060 GO:GO:0005634 GO:GO:0007420 GO:GO:0043565
GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009948
GO:GO:0009950 GO:GO:0021999 HOVERGEN:HBG005921 OMA:PVGPSCC
GeneTree:ENSGT00700000104273 EMBL:AL772209 IPI:IPI00487794
UniGene:Dr.289 SMR:Q7ZZR4 Ensembl:ENSDART00000082085
InParanoid:Q7ZZR4 Uniprot:Q7ZZR4
Length = 240
Score = 122 (48.0 bits), Expect = 0.00012, P = 0.00012
Identities = 22/61 (36%), Positives = 40/61 (65%)
Query: 94 RKKKYHR--HTPHQIQELESFFKECPHPDEKQRSELSRRLGLESKQIKFWFQNRRTQMKT 151
R+K+ HR T Q++ LE+ F+E +PD R +L+R++ L ++++ WF+NRR + +
Sbjct: 144 RRKRRHRTIFTDEQLEALENLFQETKYPDVGTREQLARKVHLREEKVEVWFKNRRAKWRR 203
Query: 152 Q 152
Q
Sbjct: 204 Q 204
>UNIPROTKB|E1BI54 [details] [associations]
symbol:HOXC8 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0048705 "skeletal
system morphogenesis" evidence=IEA] [GO:0030182 "neuron
differentiation" evidence=IEA] [GO:0009952 "anterior/posterior
pattern specification" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0000976
"transcription regulatory region sequence-specific DNA binding"
evidence=IEA] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR001827 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0030182
GO:GO:0009952 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0000122 GO:GO:0000976
GO:GO:0048705 GeneTree:ENSGT00700000104332 KO:K09308 OMA:HHGTSSI
CTD:3224 EMBL:DAAA02012840 IPI:IPI00711888 RefSeq:XP_002687278.1
RefSeq:XP_002704291.1 ProteinModelPortal:E1BI54 SMR:E1BI54
Ensembl:ENSBTAT00000016117 GeneID:100295249 KEGG:bta:100295249
Uniprot:E1BI54
Length = 242
Score = 122 (48.0 bits), Expect = 0.00012, P = 0.00012
Identities = 54/192 (28%), Positives = 87/192 (45%)
Query: 4 GSNSVGM--GSRVVAEIFPHCHS-MASGAIAQFPLSLSIKNAMDAGEM---------GLI 51
G ++ G S V + F H S +++ Q P SLS DA + L
Sbjct: 43 GGSAPGFQHASHHVQDFFHHGTSGISNSGYQQNPCSLSCHG--DASKFYGYEALPRQSLY 100
Query: 52 GEQFDPSVVGRIREEEFESRSGSDNVEGASGDDQEANED---------GPPRKKKYHRHT 102
G Q + SVV + + +S + +++ EG +Q ++ P R+ ++
Sbjct: 101 GAQQEASVV---QYPDCKSSANTNSSEGQGHLNQNSSPSLMFPWMRPHAPGRRSGRQTYS 157
Query: 103 PHQIQELESFFKECPHPDEKQRSELSRRLGLESKQIKFWFQNRRTQMKTQMERHENIILR 162
+Q ELE F P+ K+R E+S LGL +Q+K WFQNRR + K + + + R
Sbjct: 158 RYQTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWKKENNKDKLPGAR 217
Query: 163 QEHDKLRAE-NE 173
E +K+ E NE
Sbjct: 218 DE-EKVEEEGNE 228
>UNIPROTKB|P31273 [details] [associations]
symbol:HOXC8 "Homeobox protein Hox-C8" species:9606 "Homo
sapiens" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0009952 "anterior/posterior pattern
specification" evidence=IEA] [GO:0030182 "neuron differentiation"
evidence=IEA] [GO:0048705 "skeletal system morphogenesis"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=NAS] [GO:0005634 "nucleus" evidence=NAS]
[GO:0007275 "multicellular organismal development" evidence=NAS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=NAS] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR001827 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 GO:GO:0007275 GO:GO:0005634
GO:GO:0030182 GO:GO:0009952 EMBL:CH471054 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 HOGENOM:HOG000231181 GO:GO:0000122 GO:GO:0000976
GO:GO:0048705 HOVERGEN:HBG016849 eggNOG:NOG314669 OrthoDB:EOG4H464V
KO:K09308 OMA:HHGTSSI CTD:3224 EMBL:AY014300 EMBL:AY014299
EMBL:AK290959 EMBL:BC053898 EMBL:X99680 EMBL:X99681 IPI:IPI00010756
PIR:S15534 RefSeq:NP_073149.1 UniGene:Hs.664500
ProteinModelPortal:P31273 SMR:P31273 DIP:DIP-52312N IntAct:P31273
MINT:MINT-2802457 STRING:P31273 PhosphoSite:P31273 DMDM:13124745
PRIDE:P31273 DNASU:3224 Ensembl:ENST00000040584 GeneID:3224
KEGG:hsa:3224 UCSC:uc001ser.3 GeneCards:GC12P054402 HGNC:HGNC:5129
HPA:HPA028911 MIM:142970 neXtProt:NX_P31273 PharmGKB:PA29404
InParanoid:P31273 PhylomeDB:P31273 ChiTaRS:HOXC8 GenomeRNAi:3224
NextBio:12831 Bgee:P31273 CleanEx:HS_HOXC8 Genevestigator:P31273
GermOnline:ENSG00000037965 Uniprot:P31273
Length = 242
Score = 122 (48.0 bits), Expect = 0.00012, P = 0.00012
Identities = 54/192 (28%), Positives = 87/192 (45%)
Query: 4 GSNSVGM--GSRVVAEIFPHCHS-MASGAIAQFPLSLSIKNAMDAGEM---------GLI 51
G ++ G S V + F H S +++ Q P SLS DA + L
Sbjct: 43 GGSAPGFQHASHHVQDFFHHGTSGISNSGYQQNPCSLSCHG--DASKFYGYEALPRQSLY 100
Query: 52 GEQFDPSVVGRIREEEFESRSGSDNVEGASGDDQEANED---------GPPRKKKYHRHT 102
G Q + SVV + + +S + +++ EG +Q ++ P R+ ++
Sbjct: 101 GAQQEASVV---QYPDCKSSANTNSSEGQGHLNQNSSPSLMFPWMRPHAPGRRSGRQTYS 157
Query: 103 PHQIQELESFFKECPHPDEKQRSELSRRLGLESKQIKFWFQNRRTQMKTQMERHENIILR 162
+Q ELE F P+ K+R E+S LGL +Q+K WFQNRR + K + + + R
Sbjct: 158 RYQTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWKKENNKDKLPGAR 217
Query: 163 QEHDKLRAE-NE 173
E +K+ E NE
Sbjct: 218 DE-EKVEEEGNE 228
>MGI|MGI:96198 [details] [associations]
symbol:Hoxc8 "homeobox C8" species:10090 "Mus musculus"
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IDA] [GO:0000976 "transcription
regulatory region sequence-specific DNA binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0009952 "anterior/posterior pattern specification"
evidence=IGI;IMP] [GO:0030182 "neuron differentiation"
evidence=IMP] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0048705 "skeletal system morphogenesis"
evidence=IGI;IMP] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR001827 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 MGI:MGI:96198 GO:GO:0005634
GO:GO:0030182 GO:GO:0009952 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 HOGENOM:HOG000231181 GO:GO:0000122 GO:GO:0000976
GO:GO:0048705 HOVERGEN:HBG016849 GeneTree:ENSGT00700000104332
eggNOG:NOG314669 OrthoDB:EOG4H464V KO:K09308 OMA:HHGTSSI CTD:3224
EMBL:X07439 EMBL:X07646 EMBL:M35603 EMBL:X03659 IPI:IPI00132381
PIR:B25180 PIR:B36023 PIR:S13785 RefSeq:NP_034596.1 UniGene:Mm.6167
ProteinModelPortal:P09025 SMR:P09025 IntAct:P09025 MINT:MINT-210049
STRING:P09025 PhosphoSite:P09025 PRIDE:P09025 DNASU:15426
Ensembl:ENSMUST00000001703 GeneID:15426 KEGG:mmu:15426
UCSC:uc012aaf.1 InParanoid:P09025 NextBio:288178 Bgee:P09025
CleanEx:MM_HOXC8 Genevestigator:P09025
GermOnline:ENSMUSG00000001657 Uniprot:P09025
Length = 242
Score = 122 (48.0 bits), Expect = 0.00012, P = 0.00012
Identities = 54/192 (28%), Positives = 87/192 (45%)
Query: 4 GSNSVGM--GSRVVAEIFPHCHS-MASGAIAQFPLSLSIKNAMDAGEM---------GLI 51
G ++ G S V + F H S +++ Q P SLS DA + L
Sbjct: 43 GGSAPGFQHASHHVQDFFHHGTSGISNSGYQQNPCSLSCHG--DASKFYGYEALPRQSLY 100
Query: 52 GEQFDPSVVGRIREEEFESRSGSDNVEGASGDDQEANED---------GPPRKKKYHRHT 102
G Q + SVV + + +S + +++ EG +Q ++ P R+ ++
Sbjct: 101 GAQQEASVV---QYPDCKSSANTNSSEGQGHLNQNSSPSLMFPWMRPHAPGRRSGRQTYS 157
Query: 103 PHQIQELESFFKECPHPDEKQRSELSRRLGLESKQIKFWFQNRRTQMKTQMERHENIILR 162
+Q ELE F P+ K+R E+S LGL +Q+K WFQNRR + K + + + R
Sbjct: 158 RYQTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWKKENNKDKLPGAR 217
Query: 163 QEHDKLRAE-NE 173
E +K+ E NE
Sbjct: 218 DE-EKVEEEGNE 228
>RGD|2821 [details] [associations]
symbol:Hoxc8 "homeobox C8" species:10116 "Rattus norvegicus"
[GO:0000122 "negative regulation of transcription from RNA polymerase
II promoter" evidence=IEA] [GO:0000976 "transcription regulatory
region sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0009952
"anterior/posterior pattern specification" evidence=IEA] [GO:0030182
"neuron differentiation" evidence=IEA] [GO:0048705 "skeletal system
morphogenesis" evidence=IEA] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR001827 InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046
PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071
SMART:SM00389 RGD:2821 GO:GO:0005634 GO:GO:0030182 GO:GO:0009952
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0000122 GO:GO:0000976 GO:GO:0048705
GeneTree:ENSGT00700000104332 KO:K09308 OMA:HHGTSSI CTD:3224
UniGene:Rn.91646 EMBL:AC116663 IPI:IPI00919307 RefSeq:NP_001170797.2
ProteinModelPortal:F1MAK7 SMR:F1MAK7 Ensembl:ENSRNOT00000031404
GeneID:24460 KEGG:rno:24460 NextBio:744549 Uniprot:F1MAK7
Length = 242
Score = 122 (48.0 bits), Expect = 0.00012, P = 0.00012
Identities = 54/192 (28%), Positives = 87/192 (45%)
Query: 4 GSNSVGM--GSRVVAEIFPHCHS-MASGAIAQFPLSLSIKNAMDAGEM---------GLI 51
G ++ G S V + F H S +++ Q P SLS DA + L
Sbjct: 43 GGSAPGFQHASHHVQDFFHHGTSGISNSGYQQNPCSLSCHG--DASKFYGYEALPRQSLY 100
Query: 52 GEQFDPSVVGRIREEEFESRSGSDNVEGASGDDQEANED---------GPPRKKKYHRHT 102
G Q + SVV + + +S + +++ EG +Q ++ P R+ ++
Sbjct: 101 GAQQEASVV---QYPDCKSSANTNSSEGQGHLNQNSSPSLMFPWMRPHAPGRRSGRQTYS 157
Query: 103 PHQIQELESFFKECPHPDEKQRSELSRRLGLESKQIKFWFQNRRTQMKTQMERHENIILR 162
+Q ELE F P+ K+R E+S LGL +Q+K WFQNRR + K + + + R
Sbjct: 158 RYQTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWKKENNKDKLPGAR 217
Query: 163 QEHDKLRAE-NE 173
E +K+ E NE
Sbjct: 218 DE-EKVEEEGNE 228
>UNIPROTKB|F1S3F6 [details] [associations]
symbol:VSX2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0060040 "retinal bipolar neuron differentiation"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0045165 "cell
fate commitment" evidence=IEA] [GO:0008285 "negative regulation of
cell proliferation" evidence=IEA] [GO:0008284 "positive regulation
of cell proliferation" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005737 GO:GO:0008285 GO:GO:0005730
GO:GO:0008284 GO:GO:0043565 GO:GO:0045944 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR003654 Pfam:PF03826
PROSITE:PS50803 GeneTree:ENSGT00700000104013 GO:GO:0045165
GO:GO:0060040 InterPro:IPR023339 PROSITE:PS51496 OMA:FSKPEYQ
EMBL:CU463324 Ensembl:ENSSSCT00000002627 Uniprot:F1S3F6
Length = 377
Score = 126 (49.4 bits), Expect = 0.00012, P = 0.00012
Identities = 30/89 (33%), Positives = 47/89 (52%)
Query: 70 SRSGSDNVEGASGDDQEANEDG----PPRKKKYHRHTPH----QIQELESFFKECPHPDE 121
S++ S + E S D++ ++ RKK+ HR T H Q++ELE F E +PD
Sbjct: 132 SQTASSDSEDVSSSDRKMSKSALNQTKKRKKRRHRRTGHLSSYQLEELEKAFNEAHYPDV 191
Query: 122 KQRSELSRRLGLESKQIKFWFQNRRTQMK 150
R L+ + L +I+ WFQNRR + +
Sbjct: 192 YAREMLAMKTELPEDRIQVWFQNRRAKWR 220
WARNING: HSPs involving 217 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.318 0.133 0.396 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 784 784 0.00095 121 3 11 22 0.40 34
37 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 467
No. of states in DFA: 627 (67 KB)
Total size of DFA: 404 KB (2196 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 73.03u 0.10s 73.13t Elapsed: 00:00:04
Total cpu time: 73.06u 0.11s 73.17t Elapsed: 00:00:04
Start: Tue May 21 15:49:31 2013 End: Tue May 21 15:49:35 2013
WARNINGS ISSUED: 2