Your job contains 1 sequence.
>003957
MWAMSHKSFVNIPYSLLLECVKHPSLTVDSEMHLSDALLIWIDANIAQLESSNRVEDDLT
ILKEIRISILPLWFAAGKRRSSYFSKLSDESVNSILRLVKVHPACLIKVLEDVELKHLRI
RLTEYSEKVNLSGCPQMTSAILLLSVLDSLHCLDPTSRKIFECLDKDQSRIPLGFLPIFS
FEAVQEVNICKCHALHLESAVECFSKSFPSLRTIKAAYHLDFKTLNLHKLVQKCPMLCEV
DLTVDPSPVIPTKVSVVSSSSALMPLVLNKSIAGDSSLYATSVYHSGPSPSKITKLTLEG
RSDMCDADLEFISKYCVSLGYINIKGCVSVTDVCISNLIRRCVKLQSIIVCDTSFGVYSI
RALCSEVPYCNSSALCGKRNFNTLASNLQMLHMACCNGVDGMYLLELMCQARKLKSLCLS
GTQLADKALYNFSGSSLEMLDVSDTMISGAALAYMVHGNSGLKYLNARGCKNLFQQESNG
RGIEFSSYPCADLFAELGRTRKLEEIVLGWGFSFLSLEVLKPAIKLLHSITVGLGGSLGE
DALRLLPTTCPMLELVVLYFQVMSDSIIINILESLRRLQVLAICHCLGDLSISSFKLPLP
NLRKLKLERVTPWMTNNDLVILTQNCSELVELSLVGCTLLSSDSQLIISQGWPGLISLHL
EECGDITAYGVTSLFNCIALEDLLLRHNGPGIPRDFILDAASKMPMLRLVSLDLCDASDG
NFEIPDYADRYSLSTVKITKCKSKNRNLCHNWSEARRQSSVHKESLVLVWNSKNLIRTVV
KERL
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 003957
(784 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:505006471 - symbol:AT4G15475 "AT4G15475" speci... 162 3.1e-08 1
TAIR|locus:2198903 - symbol:AT1G80630 species:3702 "Arabi... 141 1.3e-06 2
TAIR|locus:2149805 - symbol:AT5G01720 "AT5G01720" species... 155 2.6e-06 2
TAIR|locus:2143320 - symbol:AT5G27920 "AT5G27920" species... 143 3.9e-06 1
WB|WBGene00015350 - symbol:C02F5.7 species:6239 "Caenorha... 139 6.4e-06 1
UNIPROTKB|F1NHD2 - symbol:FBXL2 "Uncharacterized protein"... 134 1.9e-05 1
TAIR|locus:2027082 - symbol:SKP2A species:3702 "Arabidops... 131 3.0e-05 1
UNIPROTKB|F1NNA4 - symbol:FBXL7 "Uncharacterized protein"... 123 0.00025 1
TAIR|locus:2040105 - symbol:EBF1 "AT2G25490" species:3702... 126 0.00026 1
UNIPROTKB|F1PWK1 - symbol:FBXL2 "Uncharacterized protein"... 126 0.00069 2
RGD|1305813 - symbol:Fbxl7 "F-box and leucine-rich repeat... 119 0.00091 1
>TAIR|locus:505006471 [details] [associations]
symbol:AT4G15475 "AT4G15475" species:3702 "Arabidopsis
thaliana" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0006486 "protein glycosylation" evidence=RCA]
InterPro:IPR001810 PROSITE:PS50181 SMART:SM00256 EMBL:CP002687
GenomeReviews:CT486007_GR EMBL:AL161541 SUPFAM:SSF81383
InterPro:IPR006553 SMART:SM00367 EMBL:Z97339 eggNOG:NOG300245
KO:K10268 EMBL:AF360328 EMBL:AF361808 EMBL:AY056338 EMBL:AY084229
IPI:IPI00544862 RefSeq:NP_567467.1 UniGene:At.26216
UniGene:At.66613 ProteinModelPortal:Q9C5D2 SMR:Q9C5D2
EnsemblPlants:AT4G15475.1 GeneID:827219 KEGG:ath:AT4G15475
TAIR:At4g15475 HOGENOM:HOG000243338 InParanoid:Q9C5D2 OMA:NGCHNIG
PhylomeDB:Q9C5D2 ProtClustDB:CLSN2689449 Genevestigator:Q9C5D2
Uniprot:Q9C5D2
Length = 610
Score = 162 (62.1 bits), Expect = 3.1e-08, P = 3.1e-08
Identities = 88/406 (21%), Positives = 171/406 (42%)
Query: 335 ISNL-IRRCVKLQSIIVCDTSFGVYSIRALCSEVPYCNSSALCGKRNFNTLASNLQMLHM 393
I NL + C + S+ +C + S+++L + Y L F L+ L++
Sbjct: 142 IENLSLIWCPNVSSVGLCSLAQKCTSLKSLDLQGCYVGDQGLAAVGKF---CKQLEELNL 198
Query: 394 ACCNGVDGMYLLELMCQARK-LKSLCLSGT-QLADKALYNFSGSSLEMLDV---SDTMIS 448
C G+ + +++L+ K LKS+ ++ + ++ D +L GS ++L+V I
Sbjct: 199 RFCEGLTDVGVIDLVVGCSKSLKSIGVAASAKITDLSL-EAVGSHCKLLEVLYLDSEYIH 257
Query: 449 GAALAYMVHGNSGLKYLNARGCKNLFQQESNGRGIEFSSYPCADLFA----------ELG 498
L + G LK L + C ++ G +S L++ +G
Sbjct: 258 DKGLIAVAQGCHRLKNLKLQ-CVSVTDVAFAAVGELCTSLERLALYSFQHFTDKGMRAIG 316
Query: 499 R-TRKLEEIVLG--WGFSFLSLEVLKPAIKLLHSITVGLGGSLGEDALRLLPTTCPML-E 554
+ ++KL+++ L + S LE + K L + + ++G + + +CP L E
Sbjct: 317 KGSKKLKDLTLSDCYFVSCKGLEAIAHGCKELERVEINGCHNIGTRGIEAIGKSCPRLKE 376
Query: 555 LVVLYFQVMSDSIIINILESLRRLQVLAICHC--LGDLSISSFXXXXXXXXXXXXERVTP 612
L +LY Q + +S + I + + L++L + C +GD+++ S R
Sbjct: 377 LALLYCQRIGNSALQEIGKGCKSLEILHLVDCSGIGDIAMCSIAKGCRNLKKLHIRRCYE 436
Query: 613 WMTNNDLVILTQNCSELVELSLVGCTXXXXXXXXXXXXGWPGLISLHLEECGDITAYGVT 672
+ N ++ + ++C L ELSL C G L L++ C I+ G+T
Sbjct: 437 -IGNKGIISIGKHCKSLTELSLRFCDKVGNKALIAIGKGC-SLQQLNVSGCNQISDAGIT 494
Query: 673 SLFN-CIALE--DLLLRHNGPGIPRDFILDAASKMPMLRLVSLDLC 715
++ C L D+ + N +P + + PML+ + L C
Sbjct: 495 AIARGCPQLTHLDISVLQNIGDMP---LAELGEGCPMLKDLVLSHC 537
Score = 140 (54.3 bits), Expect = 7.6e-06, P = 7.6e-06
Identities = 110/490 (22%), Positives = 199/490 (40%)
Query: 244 VDPSPVIPTKVSVVSSSSALMPLVLNKSIAGDSSLYATSVYHSGPSPSKITKLTLEGRSD 303
V+ S + T ++ +++ P + N S+ ++ + + + + L L+G
Sbjct: 122 VESSSLTDTGLTALANG---FPRIENLSLIWCPNVSSVGLCSLAQKCTSLKSLDLQG-CY 177
Query: 304 MCDADLEFISKYCVSLGYINIKGCVSVTDVCISNLIRRCVK-LQSIIVCD----TSFGVY 358
+ D L + K+C L +N++ C +TDV + +L+ C K L+SI V T +
Sbjct: 178 VGDQGLAAVGKFCKQLEELNLRFCEGLTDVGVIDLVVGCSKSLKSIGVAASAKITDLSLE 237
Query: 359 SIRALCS--EVPYCNSSALCGKRNFNTLAS--NLQMLHMACCNGVDGMYL-LELMCQARK 413
++ + C EV Y +S + K L+ L + C + D + + +C +
Sbjct: 238 AVGSHCKLLEVLYLDSEYIHDKGLIAVAQGCHRLKNLKLQCVSVTDVAFAAVGELCTS-- 295
Query: 414 LKSLCLSGTQ-LADKALYNFS-GSS-LEMLDVSDT-MISGAALAYMVHGNSGLKYLNARG 469
L+ L L Q DK + GS L+ L +SD +S L + HG L+ + G
Sbjct: 296 LERLALYSFQHFTDKGMRAIGKGSKKLKDLTLSDCYFVSCKGLEAIAHGCKELERVEING 355
Query: 470 CKNLFQQESNGRGIEFSSYPCADLFAELGRTRKLEEIVLGWGFSFLSLEVLK--PAIKLL 527
C N+ RGIE C L EL + I G S L E+ K ++++L
Sbjct: 356 CHNI-----GTRGIEAIGKSCPRL-KELALLY-CQRI----GNSALQ-EIGKGCKSLEIL 403
Query: 528 HSITVGLGGSLGEDALRLLPTTCPMLE-LVVLYFQVMSDSIIINILESLRRLQVLAICHC 586
H V G +G+ A+ + C L+ L + + + II+I + + L L++ C
Sbjct: 404 H--LVDCSG-IGDIAMCSIAKGCRNLKKLHIRRCYEIGNKGIISIGKHCKSLTELSLRFC 460
Query: 587 --LGDLSISSFXXXXXXXXXXXXERVTPWMTNNDLVILTQNCSELVELSLVGCTXXXXXX 644
+G+ ++ + +++ + + + C +L L +
Sbjct: 461 DKVGNKALIAIGKGCSLQQLNVSG--CNQISDAGITAIARGCPQLTHLDISVLQNIGDMP 518
Query: 645 XXXXXXGWPGLISLHLEECGDITAYGVTSLFN-CIALEDLLLRHNGPGIPRDFILDAASK 703
G P L L L C IT G+ L C LE + + PGI + S
Sbjct: 519 LAELGEGCPMLKDLVLSHCHHITDNGLNHLVQKCKLLETCHMVYC-PGITSAGVATVVSS 577
Query: 704 MPMLRLVSLD 713
P ++ V ++
Sbjct: 578 CPHIKKVLIE 587
>TAIR|locus:2198903 [details] [associations]
symbol:AT1G80630 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] EMBL:CP002684
GenomeReviews:CT485782_GR EMBL:AC018849 EMBL:AY086192 EMBL:BT043494
EMBL:AK229669 IPI:IPI00540486 PIR:E96838 RefSeq:NP_565242.1
UniGene:At.33886 ProteinModelPortal:Q9M8N0 SMR:Q9M8N0
EnsemblPlants:AT1G80630.1 GeneID:844402 KEGG:ath:AT1G80630
TAIR:At1g80630 eggNOG:NOG286398 HOGENOM:HOG000153253
InParanoid:Q9M8N0 OMA:CLLLREI PhylomeDB:Q9M8N0
ProtClustDB:CLSN2689365 Genevestigator:Q9M8N0 Uniprot:Q9M8N0
Length = 578
Score = 141 (54.7 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 60/250 (24%), Positives = 104/250 (41%)
Query: 238 CEVDLTVDPSPVIPTKVSVVSSSSALMPLVLNKSIAG---DSSLYATSVYHSGPSPSKIT 294
C +L + S + + +++S+ + +L G D LY Y S +
Sbjct: 243 CLTELDLSDSFLSDDLLCLIASAKLPLKKLLLSDCHGFTFDGILYLLDKYQS------LV 296
Query: 295 KLTLEGRSDMCDADLEFISKYCVSLGYINIKGCVSVTDVCISNLIRRCVKLQSIIVCDTS 354
L L+G + + D + + + L ++N+ C +T + ++I RCV L+ +I+ T+
Sbjct: 297 HLNLKGANFLSDEMVMKLGMFFRRLTFLNLSFCSKLTGLAFFSIIERCVSLRCMIMVGTN 356
Query: 355 FGVYSIRALCSEVPYCNSSALCGKRNFNTLASNLQMLHMAC----------CNGVDGMYL 404
FGV + L RN N L L+ + C C G+ +
Sbjct: 357 FGVEEYTKDTKDFK-SGVKFLYLSRNHNLLDECLEKISRHCPFIESLDVAQCPGITRDGI 415
Query: 405 LELMCQARKLKSLCLSG-TQLADKALYNFSGSSLEMLDVSDTMISGAALAYMVHGNSGLK 463
LE+ KL+SL +S T + + +F LE L T I AL + GL
Sbjct: 416 LEVWRNCGKLRSLDISRCTGIKSLGVVDFELPKLESLRACGTWIDDEALDMISKKCRGLL 475
Query: 464 YLNARGCKNL 473
+L+ +GC N+
Sbjct: 476 HLDLQGCLNV 485
Score = 53 (23.7 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 11/35 (31%), Positives = 23/35 (65%)
Query: 654 GLISLHLEECGDITAYGVTSLF-NCIALEDLLLRH 687
GL+ L L+ C ++++ GV + +CI L ++ L++
Sbjct: 473 GLLHLDLQGCLNVSSRGVKEVVQSCIRLREINLKY 507
>TAIR|locus:2149805 [details] [associations]
symbol:AT5G01720 "AT5G01720" species:3702 "Arabidopsis
thaliana" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS;TAS]
[GO:0009407 "toxin catabolic process" evidence=RCA] PROSITE:PS50181
EMBL:CP002688 GenomeReviews:BA000015_GR InterPro:IPR006553
SMART:SM00367 EMBL:AL161946 eggNOG:NOG300245 KO:K10268
EMBL:AY091103 EMBL:AY122938 EMBL:AK229588 EMBL:AY086589
IPI:IPI00541061 PIR:T48193 RefSeq:NP_568094.2 UniGene:At.24859
ProteinModelPortal:Q8RWU5 SMR:Q8RWU5 PRIDE:Q8RWU5
EnsemblPlants:AT5G01720.1 GeneID:831688 KEGG:ath:AT5G01720
TAIR:At5g01720 HOGENOM:HOG000244114 InParanoid:Q8RWU5 OMA:SINLSYC
PhylomeDB:Q8RWU5 ProtClustDB:CLSN2690716 Genevestigator:Q8RWU5
Uniprot:Q8RWU5
Length = 665
Score = 155 (59.6 bits), Expect = 2.6e-06, Sum P(2) = 2.6e-06
Identities = 118/535 (22%), Positives = 211/535 (39%)
Query: 199 SAVECFSKSFPSLRTIKAAYHLDFKTLN---LHKLVQKCPMLCEVDLTVDPSPVIPTKVS 255
S ++ FS + S +++ + K L L +++ + ++DLT P V +S
Sbjct: 33 SDLKSFSLTCKSFYQLESKHRGSLKPLRSDYLPRILTRYRNTTDLDLTFCPR-VTDYALS 91
Query: 256 VVSSSSALMPLVLNKSIAGDSSLYATSVYHSGPSPSKITKLTLEGRSDMCDADLEFISKY 315
VV S P + + ++ S A + + ++ L ++M DAD +++
Sbjct: 92 VVGCLSG--PTLRSLDLSRSGSFSAAGLLRLALKCVNLVEIDLSNATEMRDADAAVVAE- 148
Query: 316 CVSLGYINIKGCVSVTDVCISNLIRRCVKLQSIIV--C----DTSFGVYSIRALCSEVPY 369
SL + + C +TD+ I + C KL ++ + C D G+ +++ C ++
Sbjct: 149 ARSLERLKLGRCKMLTDMGIGCIAVGCKKLNTVSLKWCVGVGDLGVGLLAVK--CKDIRT 206
Query: 370 CNSSAL--CGKRNFNTLA-SNLQMLHMACCNGVDGMYLLELMCQARKLKSLCLSGTQ-LA 425
+ S L GK + L +L+ L + C GVD L L + LK L S Q L
Sbjct: 207 LDLSYLPITGKCLHDILKLQHLEELLLEGCFGVDDDSLKSLRHDCKSLKKLDASSCQNLT 266
Query: 426 DKALYNF-SGSS-LEMLDVSD-TMISGAALAYMVHGNSGLKYLNARGCKNLFQQESNGRG 482
+ L + SG+ L+ LD+S + + A + S L+ + GC G
Sbjct: 267 HRGLTSLLSGAGYLQRLDLSHCSSVISLDFASSLKKVSALQSIRLDGCS------VTPDG 320
Query: 483 IEFSSYPCADLFAELGRTRKLEEIVLGWGFSFLSLEVLKPAIKLLHSITVGLGGSLGEDA 542
++ C L E+ ++ + V G S L V+K +K L + + L +
Sbjct: 321 LKAIGTLCNSL-KEVSLSKCVS--VTDEGLSSL---VMK--LKDLRKLDITCCRKLSRVS 372
Query: 543 LRLLPTTCPML-ELVVLYFQVMSDSIIINILESLRRLQVLAIC-HCLGDLSISSFXXXXX 600
+ + +CP+L L + ++S I + R L+ L + + + D + S
Sbjct: 373 ITQIANSCPLLVSLKMESCSLVSREAFWLIGQKCRLLEELDLTDNEIDDEGLKSISSCLS 432
Query: 601 XXXXXXXERVTPWMTNNDLVILTQNCSELVELSLVGCTXXXXXXXXXXXXGWPGLISLHL 660
+ +T+ L + CS L EL L G L ++++
Sbjct: 433 LSSLKLGICLN--ITDKGLSYIGMGCSNLRELDLYRSVGITDVGISTIAQGCIHLETINI 490
Query: 661 EECGDITAYGVTSLFNCIALEDLLLRHNGPGIPRDFILDAASKMPMLRLVSLDLC 715
C DIT + SL C L+ R P I + A + L V L C
Sbjct: 491 SYCQDITDKSLVSLSKCSLLQTFESR-GCPNITSQGLAAIAVRCKRLAKVDLKKC 544
Score = 37 (18.1 bits), Expect = 2.6e-06, Sum P(2) = 2.6e-06
Identities = 10/23 (43%), Positives = 14/23 (60%)
Query: 84 FSKLSDESVNSILRLVKVHPACL 106
F LS+E V IL L+ +P+ L
Sbjct: 13 FDLLSEELVFIILDLISPNPSDL 35
>TAIR|locus:2143320 [details] [associations]
symbol:AT5G27920 "AT5G27920" species:3702 "Arabidopsis
thaliana" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0009407 "toxin catabolic
process" evidence=RCA] EMBL:CP002688 GenomeReviews:BA000015_GR
InterPro:IPR006553 SMART:SM00367 KO:K10268 HOGENOM:HOG000244114
EMBL:BT005940 EMBL:AK117239 IPI:IPI00538711 RefSeq:NP_568502.1
UniGene:At.30778 ProteinModelPortal:Q8GZ31 SMR:Q8GZ31
EnsemblPlants:AT5G27920.1 GeneID:832858 KEGG:ath:AT5G27920
TAIR:At5g27920 InParanoid:Q8GZ31 OMA:GFWALAY PhylomeDB:Q8GZ31
ProtClustDB:CLSN2689880 Genevestigator:Q8GZ31 Uniprot:Q8GZ31
Length = 642
Score = 143 (55.4 bits), Expect = 3.9e-06, P = 3.9e-06
Identities = 85/379 (22%), Positives = 162/379 (42%)
Query: 235 PMLCEVDLTVDPSPVIPTKVSVVSSSSALMPLVLNKSIAGDSSLYATSVYHSGPSPSKIT 294
P L EVD+T + +S+V + L + ++ S + Y G K
Sbjct: 248 PSLQEVDVTRCDRVSLSGLISIVRGHPDIQLLKASHCVSEVSGSFLK--YIKGLKHLKT- 304
Query: 295 KLTLEGRSDMCDADLEFISKYCVSLGYINIKGCVSVTDVCISNLIRRCVKLQSI-IVCD- 352
+ ++G + + D+ L +S C SL I + CV VTD+ + +L R C+ L+++ + C
Sbjct: 305 -IWIDG-AHVSDSSLVSLSSSCRSLMEIGLSRCVDVTDIGMISLARNCLNLKTLNLACCG 362
Query: 353 --TSFGVYSIRALCS-----EVPYCNSSALCGKRNFNTLASNLQMLHMACCNGVD--GMY 403
T + ++ C ++ C+ G ++ + +Q L + C GV+ G+
Sbjct: 363 FVTDVAISAVAQSCRNLGTLKLESCHLITEKGLQSLGCYSMLVQELDLTDCYGVNDRGLE 422
Query: 404 LLELMCQARKLK-SLCLSGTQLADKALYNFSGSSLEMLDVSDTMISGAALAYMVHGNSGL 462
+ ++LK LC T ++DK +++ ++L++ +G G+ GL
Sbjct: 423 YISKCSNLQRLKLGLC---TNISDKGIFHIGSKCSKLLELDLYRCAG-------FGDDGL 472
Query: 463 KYLNARGCKNL------FQQESNGRGIEFSSYPCADLFAELGRTRKLEEIVLGWGFSFLS 516
L+ RGCK+L + E G+E +L + L R L+ I G G
Sbjct: 473 AALS-RGCKSLNRLILSYCCELTDTGVE--QIRQLELLSHL-ELRGLKNIT-GVG----- 522
Query: 517 LEVLKPAIKLLHSITVGLGGSLGEDALRLLPTTCPMLELVVLYFQVMSDSIIINILESLR 576
L + K L + V L ++ + L L + L +SD+ + ++ +L
Sbjct: 523 LAAIASGCKKLGYLDVKLCENIDDSGFWALAYFSKNLRQINLCNCSVSDTALCMLMSNLS 582
Query: 577 RLQVLAICHCLGDLSISSF 595
R+Q + + H L +++ F
Sbjct: 583 RVQDVDLVH-LSRVTVEGF 600
>WB|WBGene00015350 [details] [associations]
symbol:C02F5.7 species:6239 "Caenorhabditis elegans"
[GO:0071688 "striated muscle myosin thick filament assembly"
evidence=IMP] InterPro:IPR001810 PROSITE:PS50181 SMART:SM00256
GO:GO:0071688 GeneTree:ENSGT00700000104023 InterPro:IPR006553
SMART:SM00367 EMBL:FO080288 eggNOG:NOG300245 KO:K10268
HOGENOM:HOG000230659 OMA:LTENVFG PIR:G88523 PIR:S44609
RefSeq:NP_741248.1 RefSeq:NP_741249.1 ProteinModelPortal:P34284
SMR:P34284 IntAct:P34284 MINT:MINT-227871 STRING:P34284
PaxDb:P34284 PRIDE:P34284 EnsemblMetazoa:C02F5.7b.1
EnsemblMetazoa:C02F5.7b.2 GeneID:3564805 KEGG:cel:CELE_C02F5.7
UCSC:C02F5.7a.1 CTD:3564805 WormBase:C02F5.7a WormBase:C02F5.7b
InParanoid:P34284 NextBio:954051 Uniprot:P34284
Length = 466
Score = 139 (54.0 bits), Expect = 6.4e-06, P = 6.4e-06
Identities = 54/201 (26%), Positives = 93/201 (46%)
Query: 292 KITKLTLEGRSDMCDADLEFISKYCVSLGYINIKGCVSVTDVCISNLIRRCVKLQSIIV- 350
K+ L LE S + D +++I C +L Y+NI C ++ D + ++ C L ++I+
Sbjct: 176 KLNYLNLENCSSITDRAMKYIGDGCPNLSYLNISWCDAIQDRGVQIILSNCKSLDTLILR 235
Query: 351 -CD-TSFGVY-SIRALCSEVPYCNSSALCGK------RNFNTLASNLQMLHMACCNGVDG 401
C+ + V+ S+ A + N C + +N A+ L+ L M+ CN +
Sbjct: 236 GCEGLTENVFGSVEAHMGAIKKLNLLQ-CFQLTDITVQNIANGATALEYLCMSNCNQISD 294
Query: 402 MYLLELMCQARKLKSLCLSG-TQLADKALYNFSGS--SLEMLDVSD-TMISGAALAYMVH 457
L+ L + LK L LSG T L D + LE LD+ D ++IS + + +
Sbjct: 295 RSLVSLGQHSHNLKVLELSGCTLLGDNGFIPLARGCRQLERLDMEDCSLISDHTINSLAN 354
Query: 458 GNSGLKYLNARGCKNLFQQES 478
+ L+ L+ C+ L ES
Sbjct: 355 NCTALRELSLSHCE-LITDES 374
Score = 119 (46.9 bits), Expect = 0.00097, P = 0.00096
Identities = 68/321 (21%), Positives = 134/321 (41%)
Query: 462 LKYLNARGCKNLFQQE-----SNGRGIE-FSSYPC---ADLFAE-LGR-TRKLEEIVLGW 510
LK L+ +GC+N+ S +E S Y C D E LGR KL + L
Sbjct: 125 LKELSLKGCENVHDSALRTFTSRCPNLEHLSLYRCKRVTDASCENLGRYCHKLNYLNLEN 184
Query: 511 GFSFL--SLEVLKPAIKLLHSITVGLGGSLGEDALRLLPTTCPMLELVVLY-FQVMSDSI 567
S +++ + L + + ++ + ++++ + C L+ ++L + +++++
Sbjct: 185 CSSITDRAMKYIGDGCPNLSYLNISWCDAIQDRGVQIILSNCKSLDTLILRGCEGLTENV 244
Query: 568 IINI---LESLRRLQVLAICHCLGDLSISSFXXXXXXXXXXXXERVTPWMTNNDLVILTQ 624
++ + ++++L +L C L D+++ + +++ LV L Q
Sbjct: 245 FGSVEAHMGAIKKLNLLQ-CFQLTDITVQNIANGATALEYLCMSNCNQ-ISDRSLVSLGQ 302
Query: 625 NCSELVELSLVGCTXXXXXXXXXXXXGWPGLISLHLEECGDITAYGVTSLFN-CIALEDL 683
+ L L L GCT G L L +E+C I+ + + SL N C AL +L
Sbjct: 303 HSHNLKVLELSGCTLLGDNGFIPLARGCRQLERLDMEDCSLISDHTINSLANNCTALREL 362
Query: 684 LLRHNGPGIPRDFILDAASK-MPMLRLVSLDLC-DASDGNFEIPDYADRYSLSTVKITKC 741
L H I + I + ASK L ++ LD C +D + +L + + C
Sbjct: 363 SLSHCEL-ITDESIQNLASKHRETLNVLELDNCPQLTDSTLSHLRHCK--ALKRIDLYDC 419
Query: 742 KSKNRNLCHNWSEARRQSSVH 762
++ ++ + R +H
Sbjct: 420 QNVSKEAIVRFQHHRPNIEIH 440
>UNIPROTKB|F1NHD2 [details] [associations]
symbol:FBXL2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0006513 "protein monoubiquitination"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
InterPro:IPR001810 PROSITE:PS50181 SMART:SM00256 GO:GO:0016020
GO:GO:0006511 GO:GO:0004842 GeneTree:ENSGT00700000104023
InterPro:IPR006553 SMART:SM00367 GO:GO:0006513 OMA:LTENVFG
EMBL:AADN02001289 IPI:IPI00581819 Ensembl:ENSGALT00000019534
Uniprot:F1NHD2
Length = 423
Score = 134 (52.2 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 68/308 (22%), Positives = 137/308 (44%)
Query: 184 VQEVNICKCHALHLESAVECFSKSFPSLRTIKAAYHLDFKTLNLHKLVQKCPMLCEVDLT 243
++++++ CH + +S+++ F+++ ++ + + L + C L +DLT
Sbjct: 80 LRQLSLRGCHVVG-DSSLKTFAQNCRNIEHLNLNGCTKITDSTCYSLSRFCSKLKHLDLT 138
Query: 244 VDPSPVIPTKVSVVSSSSALMPLV-LNKSIAGDSSLYATSVYHSGPSPSKITKLTLEGRS 302
S V T S+ S L LN S + G S K L L G +
Sbjct: 139 ---SCVAITNSSLKGLSEGCRNLEHLNLSWCDQITKDGIEALVKGCSGLKA--LFLRGCT 193
Query: 303 DMCDADLEFISKYCVSLGYINIKGCVSVTDVCISNLIRRCVKLQSIIV---CD-TSFGVY 358
+ D L+ I +C L +N++ C ++D I + R C +LQS+ V C+ T +
Sbjct: 194 QLEDEALKHIQNHCHELAILNLQSCTQISDEGIVKICRGCHRLQSLCVSGCCNLTDASLT 253
Query: 359 SIRALCSEVPYCNSSALCGK---RNFNTLASN---LQMLHMACCNGVDGMYLLELMCQAR 412
++ C + + A C + F LA N L+ + + C + L++L
Sbjct: 254 ALGLNCPRLKILEA-ARCSQLTDAGFTLLARNCHELEKMDLEECVLITDSTLIQLSIHCP 312
Query: 413 KLKSLCLSGTQL-ADKALYNFSGSS-----LEMLDVSDTM-ISGAALAYMVHGNSGLKYL 465
KL++L LS +L D + + S S+ L++L++ + + I+ L ++ + ++ L+ +
Sbjct: 313 KLQALSLSHCELITDDGILHLSNSTCGHERLQVLELDNCLLITDVTLEHLENCHN-LERI 371
Query: 466 NARGCKNL 473
C+ +
Sbjct: 372 ELYDCQQV 379
Score = 119 (46.9 bits), Expect = 0.00083, P = 0.00083
Identities = 67/274 (24%), Positives = 111/274 (40%)
Query: 414 LKSLCLSGTQLA-DKALYNFSGS--SLEMLDVSD-TMISGAALAYMVHGNSGLKYLNARG 469
L+ L L G + D +L F+ + ++E L+++ T I+ + + S LK+L+
Sbjct: 80 LRQLSLRGCHVVGDSSLKTFAQNCRNIEHLNLNGCTKITDSTCYSLSRFCSKLKHLDLTS 139
Query: 470 CKNLFQQESNGRGIEFSSYPCADLFAELGRTRKLEEIVLGWGFSFLS--LEVLKPAIKLL 527
C + S+ +G+ S C R LE + L W +E L L
Sbjct: 140 CVAI--TNSSLKGL---SEGC----------RNLEHLNLSWCDQITKDGIEALVKGCSGL 184
Query: 528 HSITVGLGGSLGEDALRLLPTTCPMLELVVLYFQV---MSDSIIINILESLRRLQVLAIC 584
++ + L ++AL+ + C EL +L Q +SD I+ I RLQ L +
Sbjct: 185 KALFLRGCTQLEDEALKHIQNHCH--ELAILNLQSCTQISDEGIVKICRGCHRLQSLCVS 242
Query: 585 HC--LGDLSISSFXXXXXXXXXXXXERVTPWMTNNDLVILTQNCSELVELSLVGCTXXXX 642
C L D S+++ R + +T+ +L +NC EL ++ L C
Sbjct: 243 GCCNLTDASLTALGLNCPRLKILEAARCSQ-LTDAGFTLLARNCHELEKMDLEECVLITD 301
Query: 643 XXXXXXXXGWPGLISLHLEECGDITAYGVTSLFN 676
P L +L L C IT G+ L N
Sbjct: 302 STLIQLSIHCPKLQALSLSHCELITDDGILHLSN 335
>TAIR|locus:2027082 [details] [associations]
symbol:SKP2A species:3702 "Arabidopsis thaliana"
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0005515 "protein binding"
evidence=IPI] [GO:0019005 "SCF ubiquitin ligase complex"
evidence=IDA;IPI] [GO:0031146 "SCF-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=IDA;IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0010311 "lateral root
formation" evidence=IMP] [GO:0051781 "positive regulation of cell
division" evidence=IMP] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IDA] [GO:0016567 "protein ubiquitination"
evidence=IDA] [GO:0071365 "cellular response to auxin stimulus"
evidence=IDA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=RCA] InterPro:IPR001810 Pfam:PF00646
PROSITE:PS50181 SMART:SM00256 UniPathway:UPA00143 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009734 GO:GO:0051781
SUPFAM:SSF81383 GO:GO:0010311 EMBL:AC015447 GO:GO:0019005
GO:GO:0071365 GO:GO:0004842 InterPro:IPR006553 SMART:SM00367
GO:GO:0031146 KO:K10268 EMBL:AY058081 EMBL:AY090308 EMBL:AY085898
IPI:IPI00519620 PIR:B86347 RefSeq:NP_564139.1 UniGene:At.25230
ProteinModelPortal:Q9LPL4 SMR:Q9LPL4 IntAct:Q9LPL4 STRING:Q9LPL4
EnsemblPlants:AT1G21410.1 GeneID:838740 KEGG:ath:AT1G21410
TAIR:At1g21410 eggNOG:NOG257455 HOGENOM:HOG000238537
InParanoid:Q9LPL4 OMA:NLNISQC PhylomeDB:Q9LPL4
ProtClustDB:CLSN2687892 Genevestigator:Q9LPL4 Uniprot:Q9LPL4
Length = 360
Score = 131 (51.2 bits), Expect = 3.0e-05, P = 3.0e-05
Identities = 70/266 (26%), Positives = 116/266 (43%)
Query: 230 LVQKCPMLCEVDLTVDPSPVIPTKVSVVSSSS-ALMPLVLNKSIA-GDSSLYATSVYHSG 287
LV K L ++L D + V +++ L L L+KS+ D SLYA + H
Sbjct: 85 LVPKFVKLQTLNLRQDKPQLEDNAVEAIANHCHELQELDLSKSLKITDRSLYALA--HGC 142
Query: 288 PSPSKITKLTLEGRSDMCDADLEFISKYCVSLGYINIKGCV-SVTDVCISNLIRRCVKLQ 346
P +TKL L G + D + +++++C L +N+ GCV +VTD + + C ++Q
Sbjct: 143 PD---LTKLNLSGCTSFSDTAIAYLTRFCRKLKVLNLCGCVKAVTDNALEAIGNNCNQMQ 199
Query: 347 SIIV--CD--TSFGVYSIRALCSEVPYCNSSALCG-----KRNFNTLAS---NLQMLHMA 394
S+ + C+ + GV S+ C P + LCG + LA +L+ L +
Sbjct: 200 SLNLGWCENISDDGVMSLAYGC---PDLRTLDLCGCVLITDESVVALADWCVHLRSLGLY 256
Query: 395 CCNGVDGMYLLELMCQARKLKSLCLSGTQLADKALYNFSGSSLEMLDVSD-TMISGAALA 453
C + + L K K + K Y+ G L L++S T ++ +A+
Sbjct: 257 YCRNITDRAMYSLAQSGVKNKP---GSWKSVKKGKYDEEG--LRSLNISQCTALTPSAVQ 311
Query: 454 YM------VHGNSGLKYLNARGCKNL 473
+ +H SG L GC NL
Sbjct: 312 AVCDSFPALHTCSGRHSLVMSGCLNL 337
>UNIPROTKB|F1NNA4 [details] [associations]
symbol:FBXL7 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000086 "G2/M transition of mitotic cell cycle"
evidence=IEA] [GO:0005813 "centrosome" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] [GO:0008283 "cell proliferation"
evidence=IEA] [GO:0019005 "SCF ubiquitin ligase complex"
evidence=IEA] [GO:0031146 "SCF-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=IEA]
InterPro:IPR001810 PROSITE:PS50181 SMART:SM00256 GO:GO:0005813
GO:GO:0000086 GO:GO:0007067 GO:GO:0008283 SUPFAM:SSF81383
GO:GO:0019005 GeneTree:ENSGT00700000104023 InterPro:IPR006553
SMART:SM00367 GO:GO:0031146 OMA:LMLETVI EMBL:AADN02007618
IPI:IPI00583555 Ensembl:ENSGALT00000021147 Uniprot:F1NNA4
Length = 376
Score = 123 (48.4 bits), Expect = 0.00025, P = 0.00025
Identities = 33/131 (25%), Positives = 65/131 (49%)
Query: 291 SKITKLTLEGRSDMCDADLEFISKYCVSLGYINIKGCVSVTDVCISNLIRRCVKLQSI-- 348
S++ L++ + D + +I+KYC L Y+N +GC +TD + L + C KL+S+
Sbjct: 247 SRLRYLSIAHCGRITDVGIRYIAKYCSKLRYLNARGCEGITDHGVEYLAKNCTKLKSLDI 306
Query: 349 ----IVCDTSFGVYSIRAL-CSEVPYCNSSALCGKRNFNTLASN---LQMLHMACCN-GV 399
+V DT ++ + + ++ G+ +A+N LQML++ C+ V
Sbjct: 307 GKCPLVSDTGLEFLALNCFNLKRLSLKSCESITGQ-GLQIVAANCFDLQMLNVQDCDVSV 365
Query: 400 DGMYLLELMCQ 410
D + ++ C+
Sbjct: 366 DALRFVKRHCK 376
>TAIR|locus:2040105 [details] [associations]
symbol:EBF1 "AT2G25490" species:3702 "Arabidopsis
thaliana" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM;IDA;TAS]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=RCA;TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0009723 "response to ethylene stimulus" evidence=IMP]
[GO:0010105 "negative regulation of ethylene mediated signaling
pathway" evidence=TAS] [GO:0042752 "regulation of circadian rhythm"
evidence=RCA] InterPro:IPR001810 Pfam:PF00646 PROSITE:PS50181
SMART:SM00256 UniPathway:UPA00143 GO:GO:0005634 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0009873 GO:GO:0009723
SUPFAM:SSF81383 GO:GO:0016567 GO:GO:0006511 GO:GO:0010105
InterPro:IPR006553 SMART:SM00367 EMBL:AC006300 EMBL:AJ609238
EMBL:AY072205 EMBL:AY091333 EMBL:AK317560 EMBL:AK229995
IPI:IPI00530647 PIR:A84649 RefSeq:NP_565597.1 UniGene:At.24288
UniGene:At.67740 ProteinModelPortal:Q9SKK0 SMR:Q9SKK0 IntAct:Q9SKK0
STRING:Q9SKK0 PRIDE:Q9SKK0 EnsemblPlants:AT2G25490.1 GeneID:817087
KEGG:ath:AT2G25490 TAIR:At2g25490 eggNOG:NOG300245
HOGENOM:HOG000238885 InParanoid:Q9SKK0 KO:K14515 OMA:KCAISDS
PhylomeDB:Q9SKK0 ProtClustDB:CLSN2686700 Genevestigator:Q9SKK0
Uniprot:Q9SKK0
Length = 628
Score = 126 (49.4 bits), Expect = 0.00026, P = 0.00026
Identities = 110/496 (22%), Positives = 203/496 (40%)
Query: 213 TIKAAYHLDFKTLNLHKLVQKCPMLCEVDLTVDPSPVIPTKVSVVSSSSA-LMPLVLNK- 270
+I+ + L L + + CP L + L + S + + ++ A L L LN+
Sbjct: 155 SIRGSNSAKVSDLGLRSIGRSCPSLGSLSLW-NVSTITDNGLLEIAEGCAQLEKLELNRC 213
Query: 271 SIAGDSSLYATSVYHSGPSPSKITKLTLEGRSDMCDADLEFISKYCVSLGYINIKGCVSV 330
S D L A + S P+ +T+LTLE S + D L I++ C L ++IK C V
Sbjct: 214 STITDKGLVA--IAKSCPN---LTELTLEACSRIGDEGLLAIARSCSKLKSVSIKNCPLV 268
Query: 331 TDVCISNLIRR--C----VKLQSIIVCDTSFGVYSIRALC-SEVPYCNSSALCGKRNFNT 383
D I++L+ C +KLQ + V D S V L +++ S + ++ F
Sbjct: 269 RDQGIASLLSNTTCSLAKLKLQMLNVTDVSLAVVGHYGLSITDLVLAGLSHV-SEKGFWV 327
Query: 384 LASN--LQMLH---MACCNGVDGMYLLELMCQARKLKSLCLSGTQL-ADKALYNFSGSSL 437
+ + LQ L+ + C GV M L + +K +S + L +D L +F+ +SL
Sbjct: 328 MGNGVGLQKLNSLTITACQGVTDMGLESVGKGCPNMKKAIISKSPLLSDNGLVSFAKASL 387
Query: 438 EM----LDVSDTMISGAALAYMVHGNSGLKYLNARGCKNLFQQESNGRGIEFSSYPCADL 493
+ L+ + +++ LK + C ++ + G+ SS+ C+ L
Sbjct: 388 SLESLQLEECHRVTQFGFFGSLLNCGEKLKAFSLVNCLSIRDLTT---GLPASSH-CSAL 443
Query: 494 FAELGRTRKLEEIVLGWGFSFLSLEVLKPAIKLLHSITV-GLGGSLGEDALRLLPTTCPM 552
R+ + GF +L + L I + GL G L L+ ++ +
Sbjct: 444 -----RSLSIRNCP---GFGDANLAAIGKLCPQLEDIDLCGLKGITESGFLHLIQSS--L 493
Query: 553 LELVVLYFQVMSDSIIINIL-ESLRRLQVLAI--CHCLGDLSISSFXXXXXXXXXXXXER 609
+++ ++D +I I + L+VL I C + D S+ S +
Sbjct: 494 VKINFSGCSNLTDRVISAITARNGWTLEVLNIDGCSNITDASLVSIAANCQILSDLDISK 553
Query: 610 VTPWMTNNDLVILTQNCS-ELVELSLVGCTXXXXXXXXXXXXGWPGLISLHLEECGDITA 668
++++ + L + +L LS+ GC+ L+ L+L++C I+
Sbjct: 554 CA--ISDSGIQALASSDKLKLQILSVAGCSMVTDKSLPAIVGLGSTLLGLNLQQCRSISN 611
Query: 669 YGVTSLFNCIALEDLL 684
V L + D+L
Sbjct: 612 STVDFLVERLYKCDIL 627
>UNIPROTKB|F1PWK1 [details] [associations]
symbol:FBXL2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0016020 "membrane" evidence=IEA] [GO:0006513
"protein monoubiquitination" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
InterPro:IPR001810 PROSITE:PS50181 SMART:SM00256 GO:GO:0016020
GO:GO:0006511 GO:GO:0004842 GeneTree:ENSGT00700000104023
InterPro:IPR006553 SMART:SM00367 GO:GO:0006513 OMA:LTENVFG
EMBL:AAEX03013456 Ensembl:ENSCAFT00000007462 Uniprot:F1PWK1
Length = 422
Score = 126 (49.4 bits), Expect = 0.00069, Sum P(2) = 0.00069
Identities = 74/311 (23%), Positives = 129/311 (41%)
Query: 293 ITKLTLEGRSDMCDADLEFISKYCVSLGYINIKGCVSVTDVCISNLIRRCVKLQSI---- 348
+ KL+L G + D+ L+ ++ C ++ ++N+ GC +TD +L R C KL+ +
Sbjct: 79 LRKLSLRGCIGVGDSSLKTFAQNCRNIEHLNLNGCTKITDSTCYSLSRFCSKLKHLDLTS 138
Query: 349 IVCDTSFGVYSIRALCSEVPYCNSSALCG---KRNFNTLASN---LQMLHMACCNGVDGM 402
V T+ + I C + Y N S C K L L+ L + C ++
Sbjct: 139 CVSITNSSLKGISEGCRNLEYLNLS-WCDQITKDGIEALVRGCRGLKALLLRGCTQLEDE 197
Query: 403 YLLELMCQARKLKSLCL-SGTQLADKALYNFSGSS--LEMLDVSD-TMISGAALAYMVHG 458
L + +L SL L S +++ D+ + L+ L +S + ++ A+L +
Sbjct: 198 ALKHIQNYCHELVSLNLQSCSRITDEGVVQICRGCHRLQALCLSGCSNLTDASLTALALN 257
Query: 459 NSGLKYLNARGCKNLFQQESNGRGIEFSSYPCADLFAELGRTRKLEEIVLGWGFSFLSLE 518
L+ L A C +L G + C DL LEE +L + + L
Sbjct: 258 CPRLQILEAARCSHL-----TDAGFTLLARNCHDL-----EKMDLEECILITDSTLIQLS 307
Query: 519 VLKPAIKLLHSITVGLGGSLGEDA-LRLLPTTCPMLELVVLYFQ--VMSDSIIINILESL 575
V P ++ L L + +D L L +TC L VL ++ + + LE+
Sbjct: 308 VHCPKLQALSLSHCEL---ITDDGILHLSNSTCGHERLRVLELDNCLLITDVALEHLENC 364
Query: 576 RRLQVLAICHC 586
R L+ L + C
Sbjct: 365 RGLERLELYDC 375
Score = 38 (18.4 bits), Expect = 0.00069, Sum P(2) = 0.00069
Identities = 8/25 (32%), Positives = 14/25 (56%)
Query: 116 KHLRIRLTEYSEKVNLSGCPQMTSA 140
K L +R+ + + V L C Q++ A
Sbjct: 16 KELLLRIFSFLDIVTLCRCAQISKA 40
>RGD|1305813 [details] [associations]
symbol:Fbxl7 "F-box and leucine-rich repeat protein 7"
species:10116 "Rattus norvegicus" [GO:0000086 "G2/M transition of
mitotic cell cycle" evidence=IEA;ISO] [GO:0005813 "centrosome"
evidence=IEA;ISO] [GO:0007067 "mitosis" evidence=IEA;ISO]
[GO:0008283 "cell proliferation" evidence=IEA;ISO] [GO:0016567
"protein ubiquitination" evidence=ISO] [GO:0019005 "SCF ubiquitin
ligase complex" evidence=IEA;ISO] [GO:0031146 "SCF-dependent
proteasomal ubiquitin-dependent protein catabolic process"
evidence=IEA;ISO] InterPro:IPR001810 PROSITE:PS50181 SMART:SM00256
RGD:1305813 GO:GO:0005813 GO:GO:0000086 GO:GO:0007067 GO:GO:0008283
SUPFAM:SSF81383 GO:GO:0019005 GeneTree:ENSGT00700000104023
InterPro:IPR006553 SMART:SM00367 GO:GO:0031146 IPI:IPI00373157
Ensembl:ENSRNOT00000031170 Uniprot:F1M6W6
Length = 449
Score = 119 (46.9 bits), Expect = 0.00091, P = 0.00091
Identities = 34/133 (25%), Positives = 67/133 (50%)
Query: 291 SKITKLTLEGRSDMCDADLEFISKYCVSLGYINIKGCVSVTDVCISNLIRRCVKLQSI-- 348
S++ L++ + D + +++KYC L Y+N +GC +TD + L + C KL+S+
Sbjct: 308 SRLRYLSIAHCGRITDVGIRYVAKYCSKLRYLNARGCEGITDHGVEYLAKNCTKLKSLDI 367
Query: 349 ----IVCDTSFGVYSIRALC---SEVPYCNSSALCGKRNFNTLASN---LQMLHMACCN- 397
+V DT G+ S+ C + + ++ G+ +A+N LQML++ C
Sbjct: 368 GKCPLVSDT--GLESLALNCFNLKRLSLKSCESITGQ-GLQIVAANCFDLQMLNVQDCEV 424
Query: 398 GVDGMYLLELMCQ 410
V+ + ++ C+
Sbjct: 425 SVEALRFVKRHCK 437
Score = 119 (46.9 bits), Expect = 0.00091, P = 0.00091
Identities = 50/182 (27%), Positives = 78/182 (42%)
Query: 306 DADLEFISKYCVSLGYINIKGCVSVTDVCISNLIRRCVKLQSIIVCD----TSFGVYSIR 361
D L I+ +C L ++ ++ CV +TD + L+ C ++ + V D + FG+ I
Sbjct: 245 DEGLHTIAAHCTQLTHLYLRRCVRLTDEGLRYLVIYCTSIKELSVSDCRFVSDFGLREIA 304
Query: 362 ALCSEVPYCNSSALCGK------RNFNTLASNLQMLHMACCNGVDGMYLLELMCQARKLK 415
L S + Y S A CG+ R S L+ L+ C G+ + L KLK
Sbjct: 305 KLESRLRYL-SIAHCGRITDVGIRYVAKYCSKLRYLNARGCEGITDHGVEYLAKNCTKLK 363
Query: 416 SL----C--LSGTQLADKALYNFSGSSLEMLDVSDTMISGAALAYMVHGNSGLKYLNARG 469
SL C +S T L AL F+ L + I+G L + L+ LN +
Sbjct: 364 SLDIGKCPLVSDTGLESLALNCFNLKRLSLKSCES--ITGQGLQIVAANCFDLQMLNVQD 421
Query: 470 CK 471
C+
Sbjct: 422 CE 423
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.322 0.136 0.408 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 784 747 0.00089 121 3 11 22 0.49 33
37 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 11
No. of states in DFA: 619 (66 KB)
Total size of DFA: 379 KB (2185 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 62.54u 0.11s 62.65t Elapsed: 00:00:04
Total cpu time: 62.55u 0.11s 62.66t Elapsed: 00:00:04
Start: Fri May 10 11:05:18 2013 End: Fri May 10 11:05:22 2013