Query 003962
Match_columns 783
No_of_seqs 387 out of 3676
Neff 7.0
Searched_HMMs 46136
Date Thu Mar 28 15:05:27 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/003962.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/003962hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN00142 sucrose synthase 100.0 5E-193 1E-197 1675.3 70.5 778 6-783 29-809 (815)
2 TIGR02470 sucr_synth sucrose s 100.0 3E-191 6E-196 1661.8 75.3 776 6-781 5-784 (784)
3 PF00862 Sucrose_synth: Sucros 100.0 5E-164 1E-168 1330.4 33.6 527 6-532 22-550 (550)
4 TIGR02468 sucrsPsyn_pln sucros 100.0 1.3E-58 2.8E-63 552.1 40.9 455 253-745 168-671 (1050)
5 KOG0853 Glycosyltransferase [C 100.0 7.4E-59 1.6E-63 515.0 26.7 491 171-772 1-495 (495)
6 TIGR02472 sucr_P_syn_N sucrose 100.0 2.3E-51 4.9E-56 466.9 41.2 426 255-742 1-438 (439)
7 PLN02939 transferase, transfer 100.0 3.1E-46 6.6E-51 439.9 49.7 515 177-745 383-967 (977)
8 PRK00654 glgA glycogen synthas 100.0 2.1E-43 4.5E-48 404.5 40.1 427 255-744 1-462 (466)
9 TIGR03449 mycothiol_MshA UDP-N 100.0 9.7E-43 2.1E-47 390.5 39.6 399 257-744 1-401 (405)
10 TIGR02095 glgA glycogen/starch 100.0 5.2E-42 1.1E-46 393.7 41.6 435 255-744 1-472 (473)
11 PLN02316 synthase/transferase 100.0 3.7E-41 8.1E-46 403.8 43.1 408 253-744 586-1033(1036)
12 cd03800 GT1_Sucrose_synthase T 100.0 6.6E-41 1.4E-45 371.9 40.5 397 256-739 1-397 (398)
13 PRK14098 glycogen synthase; Pr 100.0 8.6E-41 1.9E-45 384.0 41.4 440 252-744 4-485 (489)
14 PRK10307 putative glycosyl tra 100.0 2.5E-40 5.4E-45 372.6 39.5 396 255-744 1-407 (412)
15 cd03791 GT1_Glycogen_synthase_ 100.0 4.5E-40 9.7E-45 377.4 40.4 432 256-743 1-475 (476)
16 PRK14099 glycogen synthase; Pr 100.0 1.5E-39 3.3E-44 373.4 41.9 434 254-745 3-479 (485)
17 cd03796 GT1_PIG-A_like This fa 100.0 6E-40 1.3E-44 368.2 36.9 365 256-744 1-367 (398)
18 TIGR02149 glgA_Coryne glycogen 100.0 2E-38 4.4E-43 352.4 39.4 378 255-744 1-386 (388)
19 PRK15427 colanic acid biosynth 100.0 1.6E-38 3.6E-43 357.9 38.9 281 381-744 116-405 (406)
20 cd04962 GT1_like_5 This family 100.0 3.7E-38 8E-43 347.3 39.5 366 255-744 1-370 (371)
21 PLN02871 UDP-sulfoquinovose:DA 100.0 1.9E-38 4E-43 363.6 37.7 374 252-744 56-434 (465)
22 PRK15484 lipopolysaccharide 1, 100.0 7.1E-38 1.5E-42 349.8 38.8 375 253-745 1-378 (380)
23 cd03818 GT1_ExpC_like This fam 100.0 3.9E-37 8.5E-42 345.1 38.0 363 294-740 15-396 (396)
24 cd03805 GT1_ALG2_like This fam 100.0 7.2E-37 1.6E-41 340.5 35.7 386 255-738 1-392 (392)
25 TIGR03088 stp2 sugar transfera 100.0 2.3E-36 4.9E-41 335.2 37.7 365 256-744 3-372 (374)
26 KOG1111 N-acetylglucosaminyltr 100.0 1.2E-37 2.6E-42 326.4 25.6 372 255-757 1-374 (426)
27 cd05844 GT1_like_7 Glycosyltra 100.0 3.3E-36 7.2E-41 331.2 35.3 280 382-740 81-366 (367)
28 cd04955 GT1_like_6 This family 100.0 1.8E-35 3.9E-40 323.8 39.0 361 256-743 1-363 (363)
29 PRK15179 Vi polysaccharide bio 100.0 6.2E-36 1.3E-40 352.3 36.4 458 179-743 204-692 (694)
30 PRK15490 Vi polysaccharide bio 100.0 2.4E-35 5.2E-40 333.6 38.9 398 273-744 169-575 (578)
31 cd03792 GT1_Trehalose_phosphor 100.0 2.4E-35 5.2E-40 327.6 36.5 287 381-744 83-371 (372)
32 cd03819 GT1_WavL_like This fam 100.0 2.7E-35 5.9E-40 321.8 33.2 347 276-734 8-355 (355)
33 cd03821 GT1_Bme6_like This fam 100.0 8.9E-35 1.9E-39 315.2 36.9 372 256-739 1-374 (375)
34 cd03799 GT1_amsK_like This is 100.0 5.7E-34 1.2E-38 310.6 36.7 271 382-738 78-355 (355)
35 cd03795 GT1_like_4 This family 100.0 1.1E-33 2.5E-38 308.5 37.6 354 256-735 1-357 (357)
36 cd03813 GT1_like_3 This family 100.0 4.2E-35 9.1E-40 336.8 27.1 292 382-743 172-475 (475)
37 cd03794 GT1_wbuB_like This fam 100.0 2.2E-33 4.7E-38 305.4 37.5 387 256-739 1-394 (394)
38 cd03802 GT1_AviGT4_like This f 100.0 1.9E-33 4.2E-38 304.7 36.7 333 255-743 1-335 (335)
39 cd03801 GT1_YqgM_like This fam 100.0 3.9E-33 8.4E-38 299.5 38.5 373 256-742 1-373 (374)
40 cd03814 GT1_like_2 This family 100.0 1.5E-33 3.2E-38 306.3 35.6 363 256-743 1-364 (364)
41 cd04951 GT1_WbdM_like This fam 100.0 3.7E-33 8.1E-38 304.8 37.1 281 382-743 78-359 (360)
42 cd03822 GT1_ecORF704_like This 100.0 6.9E-33 1.5E-37 301.7 38.7 357 256-742 1-365 (366)
43 cd03817 GT1_UGDG_like This fam 100.0 9.9E-33 2.1E-37 299.6 37.5 370 256-743 1-372 (374)
44 cd03807 GT1_WbnK_like This fam 100.0 4.8E-33 1E-37 300.5 34.6 363 256-743 1-365 (365)
45 PLN02846 digalactosyldiacylgly 100.0 3.4E-33 7.3E-38 315.0 34.0 372 253-745 3-392 (462)
46 cd03812 GT1_CapH_like This fam 100.0 2.9E-33 6.2E-38 306.2 32.0 346 256-726 1-347 (358)
47 cd03816 GT1_ALG1_like This fam 100.0 8.6E-33 1.9E-37 312.4 36.0 391 252-739 1-411 (415)
48 PRK09922 UDP-D-galactose:(gluc 100.0 1.9E-33 4.2E-38 311.2 29.5 268 382-744 83-355 (359)
49 cd03825 GT1_wcfI_like This fam 100.0 9.3E-33 2E-37 302.2 34.3 343 255-744 1-364 (365)
50 cd03806 GT1_ALG11_like This fa 100.0 1.8E-32 4E-37 310.0 34.8 383 257-736 3-418 (419)
51 cd03820 GT1_amsD_like This fam 100.0 3.6E-32 7.8E-37 291.2 35.2 345 256-739 1-347 (348)
52 PLN02949 transferase, transfer 100.0 5.3E-32 1.2E-36 308.6 38.4 394 249-744 28-456 (463)
53 PRK10125 putative glycosyl tra 100.0 1.1E-32 2.4E-37 310.1 32.0 278 381-744 92-404 (405)
54 cd03809 GT1_mtfB_like This fam 100.0 1.1E-32 2.4E-37 300.0 30.7 364 256-739 1-364 (365)
55 cd03808 GT1_cap1E_like This fa 100.0 7.9E-32 1.7E-36 289.8 36.7 356 256-739 1-358 (359)
56 cd03823 GT1_ExpE7_like This fa 100.0 8.8E-32 1.9E-36 291.4 35.9 354 256-743 1-358 (359)
57 cd03798 GT1_wlbH_like This fam 100.0 2.1E-31 4.6E-36 287.5 38.6 284 381-743 91-375 (377)
58 TIGR03087 stp1 sugar transfera 100.0 1.4E-32 2.9E-37 308.6 26.2 283 382-743 103-395 (397)
59 TIGR02918 accessory Sec system 100.0 1.2E-31 2.5E-36 308.6 31.5 280 381-744 209-499 (500)
60 cd03811 GT1_WabH_like This fam 100.0 4.4E-31 9.6E-36 282.8 32.3 272 382-730 80-352 (353)
61 cd04946 GT1_AmsK_like This fam 100.0 1.1E-30 2.3E-35 294.6 31.0 276 381-739 125-406 (407)
62 COG0297 GlgA Glycogen synthase 100.0 1.6E-29 3.5E-34 285.4 34.9 438 255-745 1-478 (487)
63 PLN02275 transferase, transfer 100.0 2.9E-29 6.4E-34 279.5 30.6 318 294-703 23-370 (371)
64 cd04949 GT1_gtfA_like This fam 100.0 2.3E-29 4.9E-34 278.8 29.5 273 382-738 98-372 (372)
65 cd03804 GT1_wbaZ_like This fam 100.0 1.6E-29 3.4E-34 278.0 25.0 263 382-738 82-350 (351)
66 PLN02501 digalactosyldiacylgly 100.0 1.3E-28 2.7E-33 281.3 28.8 273 382-744 433-709 (794)
67 PHA01630 putative group 1 glyc 100.0 2E-28 4.3E-33 268.4 26.2 258 389-745 52-331 (331)
68 cd03793 GT1_Glycogen_synthase_ 100.0 1.6E-26 3.6E-31 262.1 31.2 331 381-744 146-586 (590)
69 PRK00726 murG undecaprenyldiph 99.9 2.1E-25 4.6E-30 246.5 31.6 343 255-743 2-356 (357)
70 PHA01633 putative glycosyl tra 99.9 3.3E-25 7.1E-30 241.5 27.5 224 447-739 89-334 (335)
71 cd03788 GT1_TPS Trehalose-6-Ph 99.9 1.9E-25 4.1E-30 255.5 24.8 312 383-740 131-457 (460)
72 cd03785 GT1_MurG MurG is an N- 99.9 3.4E-24 7.3E-29 235.4 30.3 325 276-736 8-349 (350)
73 TIGR01133 murG undecaprenyldip 99.9 9E-24 2E-28 231.9 29.7 316 294-736 19-346 (348)
74 TIGR02400 trehalose_OtsA alpha 99.9 2.1E-23 4.6E-28 237.5 28.6 317 375-741 120-453 (456)
75 PRK05749 3-deoxy-D-manno-octul 99.9 6.1E-23 1.3E-27 232.6 29.7 285 382-743 123-418 (425)
76 PF00534 Glycos_transf_1: Glyc 99.9 3.9E-23 8.5E-28 204.0 16.3 160 545-724 12-172 (172)
77 PRK13609 diacylglycerol glucos 99.9 4.8E-22 1E-26 221.9 27.0 263 382-744 103-371 (380)
78 cd04950 GT1_like_1 Glycosyltra 99.9 5.2E-21 1.1E-25 213.4 31.5 267 380-743 99-370 (373)
79 PLN03063 alpha,alpha-trehalose 99.9 2.7E-21 5.8E-26 233.1 27.5 323 374-744 139-477 (797)
80 PLN02605 monogalactosyldiacylg 99.9 1.6E-20 3.5E-25 210.2 28.0 263 382-742 99-379 (382)
81 TIGR02094 more_P_ylases alpha- 99.9 3.7E-20 8E-25 216.1 30.5 349 371-742 149-598 (601)
82 PRK14501 putative bifunctional 99.9 1.7E-20 3.6E-25 226.0 24.5 322 374-745 125-463 (726)
83 cd01635 Glycosyltransferase_GT 99.9 5.2E-20 1.1E-24 186.6 23.8 121 553-688 109-229 (229)
84 COG0438 RfaG Glycosyltransfera 99.8 5.1E-19 1.1E-23 187.2 27.3 291 384-745 84-377 (381)
85 PRK13608 diacylglycerol glucos 99.8 7E-19 1.5E-23 197.6 26.2 262 382-743 103-370 (391)
86 TIGR00236 wecB UDP-N-acetylglu 99.8 4.7E-18 1E-22 188.8 23.5 274 382-740 85-363 (365)
87 TIGR02398 gluc_glyc_Psyn gluco 99.8 3.7E-17 8.1E-22 186.0 29.2 317 383-741 132-479 (487)
88 PRK09814 beta-1,6-galactofuran 99.8 2.2E-17 4.7E-22 181.6 22.8 240 383-732 63-319 (333)
89 PRK00025 lpxB lipid-A-disaccha 99.8 1.3E-16 2.8E-21 177.8 26.1 249 382-725 84-356 (380)
90 cd04299 GT1_Glycogen_Phosphory 99.8 1.8E-16 3.9E-21 188.4 28.4 344 375-742 240-687 (778)
91 cd03786 GT1_UDP-GlcNAc_2-Epime 99.7 1.2E-16 2.6E-21 176.6 23.0 252 382-718 87-345 (363)
92 KOG1387 Glycosyltransferase [C 99.7 3.6E-15 7.8E-20 156.7 30.3 393 249-742 37-456 (465)
93 PLN03064 alpha,alpha-trehalose 99.7 1.8E-15 3.9E-20 182.4 27.2 320 374-742 223-559 (934)
94 TIGR03713 acc_sec_asp1 accesso 99.7 4.6E-15 9.9E-20 171.5 27.3 169 548-741 319-518 (519)
95 KOG2941 Beta-1,4-mannosyltrans 99.7 1.8E-14 3.8E-19 151.7 25.9 376 296-739 33-436 (444)
96 PF13692 Glyco_trans_1_4: Glyc 99.6 4.9E-15 1.1E-19 140.3 9.4 130 548-704 2-133 (135)
97 PF05693 Glycogen_syn: Glycoge 99.6 1.7E-13 3.7E-18 155.6 21.2 332 383-744 143-581 (633)
98 TIGR00215 lpxB lipid-A-disacch 99.5 1.8E-12 3.9E-17 145.6 25.8 251 382-724 88-365 (385)
99 PF13524 Glyco_trans_1_2: Glyc 99.4 3.6E-12 7.9E-17 113.3 10.8 92 643-740 1-92 (92)
100 PF00982 Glyco_transf_20: Glyc 99.3 8.6E-11 1.9E-15 134.4 21.4 313 383-742 141-472 (474)
101 PF13579 Glyco_trans_4_4: Glyc 99.3 1.5E-11 3.3E-16 118.0 9.0 160 278-503 1-160 (160)
102 PRK10117 trehalose-6-phosphate 99.2 1.2E-09 2.5E-14 124.0 24.4 314 383-743 123-452 (474)
103 PF13439 Glyco_transf_4: Glyco 99.2 6.4E-11 1.4E-15 115.6 12.1 168 275-509 9-176 (177)
104 PRK12446 undecaprenyldiphospho 99.2 7.8E-09 1.7E-13 114.8 30.0 327 276-741 10-348 (352)
105 COG0707 MurG UDP-N-acetylgluco 99.2 2.8E-08 6E-13 110.1 33.1 313 276-725 9-339 (357)
106 PLN02205 alpha,alpha-trehalose 99.2 2E-09 4.4E-14 130.9 26.1 312 385-742 203-549 (854)
107 TIGR02919 accessory Sec system 99.1 6.5E-09 1.4E-13 118.1 24.7 143 548-724 282-425 (438)
108 COG0380 OtsA Trehalose-6-phosp 99.1 1.6E-08 3.6E-13 114.3 25.5 323 374-742 139-477 (486)
109 cd03784 GT1_Gtf_like This fami 99.0 1.2E-07 2.7E-12 106.6 25.7 135 545-720 237-381 (401)
110 PF08323 Glyco_transf_5: Starc 98.9 5.4E-09 1.2E-13 110.3 10.5 186 256-467 1-232 (245)
111 TIGR01426 MGT glycosyltransfer 98.9 8.3E-07 1.8E-11 99.8 28.9 111 614-741 273-389 (392)
112 PF09314 DUF1972: Domain of un 98.9 4.4E-08 9.5E-13 98.2 15.8 182 254-505 1-185 (185)
113 TIGR03492 conserved hypothetic 98.8 1.3E-06 2.9E-11 98.6 26.9 272 381-740 91-394 (396)
114 PF13528 Glyco_trans_1_3: Glyc 98.7 1.1E-06 2.3E-11 95.7 22.0 116 546-701 191-315 (318)
115 TIGR03568 NeuC_NnaA UDP-N-acet 98.7 2E-06 4.2E-11 96.2 23.4 266 382-741 92-364 (365)
116 PF13477 Glyco_trans_4_2: Glyc 98.5 1.8E-06 3.9E-11 82.1 13.8 123 294-458 15-139 (139)
117 COG1519 KdtA 3-deoxy-D-manno-o 98.4 0.00019 4.2E-09 79.6 28.2 156 548-727 231-403 (419)
118 PF02350 Epimerase_2: UDP-N-ac 98.4 2.3E-05 4.9E-10 87.0 20.7 271 383-742 67-345 (346)
119 TIGR00661 MJ1255 conserved hyp 98.4 6E-05 1.3E-09 82.7 22.6 69 615-693 228-302 (321)
120 PHA03392 egt ecdysteroid UDP-g 98.3 0.00033 7.2E-09 81.7 28.9 139 548-724 297-446 (507)
121 PF13844 Glyco_transf_41: Glyc 98.3 2.4E-05 5.3E-10 88.9 17.0 184 535-744 274-466 (468)
122 TIGR03590 PseG pseudaminic aci 98.2 0.00012 2.6E-09 78.9 21.2 98 548-673 171-269 (279)
123 PF04007 DUF354: Protein of un 98.0 0.0012 2.6E-08 72.7 23.1 62 634-703 243-307 (335)
124 COG1819 Glycosyl transferases, 98.0 0.00045 9.9E-09 78.4 20.3 158 546-742 236-399 (406)
125 PLN02448 UDP-glycosyltransfera 98.0 0.0086 1.9E-07 69.2 30.3 138 547-722 274-428 (459)
126 PF02684 LpxB: Lipid-A-disacch 97.9 0.0027 5.8E-08 71.0 23.6 241 381-716 80-346 (373)
127 KOG3742 Glycogen synthase [Car 97.9 2.8E-05 6.2E-10 85.2 7.3 108 628-740 492-608 (692)
128 COG0763 LpxB Lipid A disacchar 97.8 0.0026 5.6E-08 70.2 20.4 199 381-670 83-289 (381)
129 COG3914 Spy Predicted O-linked 97.6 0.0011 2.5E-08 75.6 15.9 181 537-743 421-612 (620)
130 cd04300 GT1_Glycogen_Phosphory 97.6 0.0012 2.5E-08 79.5 15.9 152 538-698 520-689 (797)
131 COG4641 Uncharacterized protei 97.6 0.0052 1.1E-07 67.4 19.5 192 495-743 161-360 (373)
132 COG0381 WecB UDP-N-acetylgluco 97.6 0.035 7.6E-07 61.6 25.6 274 382-744 91-370 (383)
133 COG0058 GlgP Glucan phosphoryl 97.4 0.004 8.6E-08 74.2 16.4 143 540-690 479-630 (750)
134 PRK10017 colanic acid biosynth 97.4 0.13 2.8E-06 58.8 28.0 139 564-724 260-406 (426)
135 PRK14986 glycogen phosphorylas 97.3 0.0027 5.9E-08 76.4 14.6 153 538-699 533-703 (815)
136 PRK01021 lpxB lipid-A-disaccha 97.3 0.038 8.3E-07 64.9 23.1 243 382-722 309-583 (608)
137 PRK14985 maltodextrin phosphor 97.3 0.0022 4.7E-08 76.9 12.9 149 538-695 519-685 (798)
138 PLN03007 UDP-glucosyltransfera 97.2 0.7 1.5E-05 53.8 35.6 78 615-704 344-438 (482)
139 TIGR02093 P_ylase glycogen/sta 97.2 0.0044 9.6E-08 74.4 14.5 151 538-697 517-685 (794)
140 PF12000 Glyco_trans_4_3: Gkyc 97.1 0.0046 9.9E-08 61.6 11.2 110 371-509 55-170 (171)
141 PLN02208 glycosyltransferase f 97.0 1 2.2E-05 51.9 31.3 153 547-723 251-415 (442)
142 PLN02562 UDP-glycosyltransfera 97.0 1.2 2.5E-05 51.5 31.8 88 615-716 327-419 (448)
143 PLN02554 UDP-glycosyltransfera 96.8 1.7 3.6E-05 50.7 31.8 88 616-716 342-447 (481)
144 PLN00414 glycosyltransferase f 96.7 1.8 3.8E-05 50.0 31.1 93 618-724 314-417 (446)
145 PLN02173 UDP-glucosyl transfer 96.7 1.9 4E-05 49.9 33.1 79 616-704 317-406 (449)
146 PRK02797 4-alpha-L-fucosyltran 96.6 0.39 8.4E-06 52.1 21.5 170 547-744 144-316 (322)
147 PLN02670 transferase, transfer 96.5 2.5 5.4E-05 49.2 31.0 112 618-744 341-465 (472)
148 PLN02863 UDP-glucoronosyl/UDP- 96.5 2.5 5.5E-05 49.2 32.7 118 616-746 343-473 (477)
149 PRK14089 ipid-A-disaccharide s 96.3 0.066 1.4E-06 59.5 14.2 91 548-670 168-260 (347)
150 PF08288 PIGA: PIGA (GPI ancho 96.2 0.027 5.9E-07 49.3 8.0 72 335-417 13-86 (90)
151 PLN02410 UDP-glucoronosyl/UDP- 96.1 4 8.6E-05 47.2 31.1 92 616-722 324-421 (451)
152 PLN02210 UDP-glucosyl transfer 96.0 4.1 9E-05 47.1 33.4 131 547-704 269-413 (456)
153 PLN02992 coniferyl-alcohol glu 96.0 4.3 9.4E-05 47.3 27.5 79 616-704 338-425 (481)
154 PF00343 Phosphorylase: Carboh 96.0 0.14 3E-06 61.3 15.4 151 538-697 434-602 (713)
155 COG1817 Uncharacterized protei 95.8 1.1 2.3E-05 48.6 19.4 111 559-704 199-312 (346)
156 COG4671 Predicted glycosyl tra 95.7 3.3 7.1E-05 45.7 23.0 134 546-704 218-363 (400)
157 PF11440 AGT: DNA alpha-glucos 95.6 2.4 5.2E-05 45.2 20.8 145 545-703 177-350 (355)
158 PLN02555 limonoid glucosyltran 95.6 6.4 0.00014 45.9 30.2 94 615-723 336-441 (480)
159 KOG1050 Trehalose-6-phosphate 95.6 0.87 1.9E-05 55.3 20.1 154 546-705 274-439 (732)
160 PF07429 Glyco_transf_56: 4-al 95.3 1.3 2.9E-05 48.7 18.6 123 547-682 183-308 (360)
161 PF06258 Mito_fiss_Elm1: Mitoc 95.2 1.8 3.9E-05 47.5 19.7 110 546-674 145-259 (311)
162 COG3980 spsG Spore coat polysa 94.7 1.3 2.8E-05 47.3 16.0 139 547-722 158-305 (318)
163 PF04464 Glyphos_transf: CDP-G 94.5 0.29 6.3E-06 54.6 11.7 236 384-704 79-334 (369)
164 COG3660 Predicted nucleoside-d 94.0 5.8 0.00013 42.1 18.6 112 545-675 159-276 (329)
165 PLN02152 indole-3-acetate beta 93.3 20 0.00043 41.6 30.3 140 547-704 261-415 (455)
166 PF05159 Capsule_synth: Capsul 92.9 11 0.00024 40.1 19.9 123 545-696 114-244 (269)
167 PF04101 Glyco_tran_28_C: Glyc 91.4 0.11 2.4E-06 51.0 2.1 91 616-721 55-155 (167)
168 PLN03015 UDP-glucosyl transfer 91.3 34 0.00074 39.8 31.9 72 627-704 342-424 (470)
169 PF00201 UDPGT: UDP-glucoronos 90.1 1.2 2.6E-05 51.8 9.4 135 547-718 276-417 (500)
170 cd03789 GT1_LPS_heptosyltransf 90.0 1.9 4.2E-05 46.0 10.2 98 550-670 124-223 (279)
171 PLN02764 glycosyltransferase f 88.6 54 0.0012 38.0 33.6 91 618-722 319-420 (453)
172 PLN03004 UDP-glycosyltransfera 87.7 7.2 0.00016 45.1 13.4 85 616-716 334-430 (451)
173 COG2327 WcaK Polysaccharide py 87.5 55 0.0012 37.0 27.8 88 616-716 266-357 (385)
174 TIGR03609 S_layer_CsaB polysac 86.9 32 0.00069 37.1 17.2 86 563-670 190-275 (298)
175 PF01075 Glyco_transf_9: Glyco 86.8 6.6 0.00014 40.9 11.6 103 546-670 104-208 (247)
176 PRK10422 lipopolysaccharide co 86.2 6.4 0.00014 43.7 11.6 103 547-670 183-287 (352)
177 TIGR02195 heptsyl_trn_II lipop 85.2 9 0.0002 42.0 12.2 102 545-670 171-276 (334)
178 PLN02167 UDP-glycosyltransfera 81.2 63 0.0014 37.6 17.5 79 616-704 340-432 (475)
179 PRK05562 precorrin-2 dehydroge 80.8 63 0.0014 33.8 15.4 120 641-767 86-212 (223)
180 TIGR02193 heptsyl_trn_I lipopo 80.7 18 0.00039 39.3 12.2 99 547-670 179-279 (319)
181 PF11997 DUF3492: Domain of un 79.5 3.2 6.8E-05 44.6 5.6 79 382-460 171-255 (268)
182 TIGR02201 heptsyl_trn_III lipo 78.9 16 0.00034 40.4 11.1 102 548-670 182-285 (344)
183 PF10087 DUF2325: Uncharacteri 78.9 4.5 9.8E-05 36.2 5.6 84 582-679 2-90 (97)
184 KOG4626 O-linked N-acetylgluco 78.3 28 0.00062 41.2 12.7 194 538-758 751-952 (966)
185 PF08660 Alg14: Oligosaccharid 76.9 13 0.00029 37.0 8.8 63 382-463 91-159 (170)
186 PF06925 MGDG_synth: Monogalac 76.6 15 0.00032 36.3 9.0 61 382-465 88-152 (169)
187 PRK10964 ADP-heptose:LPS hepto 76.3 24 0.00053 38.5 11.6 96 550-670 181-278 (322)
188 COG0859 RfaF ADP-heptose:LPS h 76.3 23 0.00051 39.1 11.5 98 548-670 176-276 (334)
189 PLN00164 glucosyltransferase; 76.1 38 0.00083 39.5 13.6 92 618-723 341-445 (480)
190 PF01975 SurE: Survival protei 75.5 27 0.00059 35.7 10.7 38 255-318 1-38 (196)
191 PLN02534 UDP-glycosyltransfera 75.2 1.8E+02 0.0038 34.2 33.1 77 616-704 344-442 (491)
192 PRK10916 ADP-heptose:LPS hepto 70.3 37 0.00081 37.5 11.3 100 548-670 181-286 (348)
193 PF03401 TctC: Tripartite tric 67.8 95 0.0021 33.3 13.4 151 548-722 78-244 (274)
194 PLN02207 UDP-glycosyltransfera 67.7 2.4E+02 0.0053 32.9 17.5 79 616-704 332-424 (468)
195 PF04230 PS_pyruv_trans: Polys 67.1 1.5E+02 0.0033 30.2 16.1 96 560-672 189-284 (286)
196 COG1618 Predicted nucleotide k 67.0 1.2E+02 0.0027 30.3 12.4 130 251-415 2-139 (179)
197 PF12038 DUF3524: Domain of un 64.0 19 0.00041 35.8 6.4 110 382-504 58-168 (168)
198 PF03016 Exostosin: Exostosin 62.5 18 0.00039 38.8 6.7 70 630-700 227-299 (302)
199 KOG0780 Signal recognition par 62.2 2.2E+02 0.0047 32.4 14.6 201 550-769 156-380 (483)
200 PRK00676 hemA glutamyl-tRNA re 61.7 2.1E+02 0.0045 31.9 14.7 125 578-725 173-305 (338)
201 PF04413 Glycos_transf_N: 3-De 59.7 41 0.00088 34.0 8.2 71 383-468 95-167 (186)
202 KOG1192 UDP-glucuronosyl and U 58.9 2.4E+02 0.0052 32.5 15.6 142 548-722 278-434 (496)
203 TIGR01470 cysG_Nterm siroheme 57.2 2.3E+02 0.005 29.0 15.8 162 579-764 32-201 (205)
204 TIGR00087 surE 5'/3'-nucleotid 56.4 2.1E+02 0.0046 30.3 13.2 36 380-415 83-129 (244)
205 COG2910 Putative NADH-flavin r 56.3 11 0.00023 38.2 3.2 33 255-316 1-33 (211)
206 PRK13932 stationary phase surv 55.8 1.7E+02 0.0037 31.3 12.4 35 380-414 88-133 (257)
207 COG1703 ArgK Putative periplas 55.1 2.1E+02 0.0045 31.4 12.8 144 235-416 25-176 (323)
208 PF10933 DUF2827: Protein of u 54.3 1.2E+02 0.0027 33.8 11.2 162 539-725 180-345 (364)
209 PF05686 Glyco_transf_90: Glyc 46.3 52 0.0011 37.4 7.2 81 661-745 234-318 (395)
210 PF09752 DUF2048: Uncharacteri 43.9 1.3E+02 0.0029 33.5 9.6 33 382-414 173-205 (348)
211 smart00672 CAP10 Putative lipo 43.7 91 0.002 33.3 8.1 85 658-746 162-250 (256)
212 KOG1021 Acetylglucosaminyltran 43.7 1.9E+02 0.0042 33.6 11.4 96 631-732 335-433 (464)
213 KOG0832 Mitochondrial/chloropl 43.5 2.5E+02 0.0055 29.5 10.7 125 547-704 107-233 (251)
214 COG1647 Esterase/lipase [Gener 41.4 1.4E+02 0.003 31.4 8.5 44 370-415 73-116 (243)
215 PF05728 UPF0227: Uncharacteri 39.5 2.7E+02 0.0058 28.2 10.4 30 386-415 61-90 (187)
216 COG0482 TrmU Predicted tRNA(5- 37.3 36 0.00078 38.0 3.9 105 277-415 11-125 (356)
217 PF15024 Glyco_transf_18: Glyc 36.1 92 0.002 36.8 7.1 154 548-745 277-456 (559)
218 TIGR00715 precor6x_red precorr 36.1 1.4E+02 0.0031 31.8 8.1 54 641-702 198-253 (256)
219 PLN00016 RNA-binding protein; 35.8 35 0.00077 38.1 3.7 20 294-317 71-90 (378)
220 PF10649 DUF2478: Protein of u 35.7 67 0.0015 31.8 5.1 40 632-671 85-130 (159)
221 PRK04020 rps2P 30S ribosomal p 35.6 2.6E+02 0.0056 28.9 9.6 150 558-739 47-199 (204)
222 COG0496 SurE Predicted acid ph 34.9 2.5E+02 0.0054 30.0 9.5 35 382-416 82-127 (252)
223 PRK13933 stationary phase surv 34.9 5.1E+02 0.011 27.7 12.0 35 380-414 84-129 (253)
224 PRK13935 stationary phase surv 34.6 6E+02 0.013 27.2 13.1 35 380-414 83-128 (253)
225 PRK03359 putative electron tra 34.6 1.4E+02 0.0031 31.8 7.8 34 383-416 112-149 (256)
226 PRK10840 transcriptional regul 34.5 4.9E+02 0.011 26.1 12.5 110 579-704 3-124 (216)
227 PRK12342 hypothetical protein; 33.8 1.3E+02 0.0027 32.2 7.2 34 383-416 109-146 (254)
228 TIGR03642 cas_csx13 CRISPR-ass 32.3 1.5E+02 0.0033 28.1 6.7 101 294-406 9-116 (124)
229 cd01020 TroA_b Metal binding p 31.8 2.3E+02 0.005 30.1 9.0 101 633-741 46-147 (264)
230 PRK06988 putative formyltransf 30.6 2.7E+02 0.0058 30.6 9.4 13 295-307 17-29 (312)
231 PF03033 Glyco_transf_28: Glyc 30.2 38 0.00083 31.5 2.4 21 395-415 110-130 (139)
232 COG2204 AtoC Response regulato 29.0 6.7E+02 0.015 29.3 12.5 108 580-705 5-121 (464)
233 PRK13934 stationary phase surv 29.0 7.6E+02 0.016 26.6 12.5 34 381-414 82-127 (266)
234 COG1797 CobB Cobyrinic acid a, 28.7 2.4E+02 0.0051 32.6 8.5 62 602-673 260-332 (451)
235 TIGR01568 A_thal_3678 uncharac 28.2 1E+02 0.0023 25.9 4.3 51 198-249 7-59 (66)
236 PRK05331 putative phosphate ac 28.0 7.1E+02 0.015 27.7 12.2 53 556-622 8-61 (334)
237 COG2236 Predicted phosphoribos 27.5 1.3E+02 0.0028 30.8 5.7 49 361-410 8-56 (192)
238 PLN03228 methylthioalkylmalate 27.3 1.1E+03 0.024 27.9 14.5 109 109-234 18-143 (503)
239 COG4088 Predicted nucleotide k 26.5 3.2E+02 0.007 28.6 8.2 50 364-414 56-108 (261)
240 TIGR02990 ectoine_eutA ectoine 25.6 4.5E+02 0.0098 27.7 9.7 33 382-414 180-214 (239)
241 TIGR00732 dprA DNA protecting 25.6 6E+02 0.013 26.4 10.5 124 560-698 82-218 (220)
242 PLN02657 3,8-divinyl protochlo 25.3 62 0.0013 36.6 3.4 52 237-317 43-94 (390)
243 PF02601 Exonuc_VII_L: Exonucl 25.2 9E+02 0.02 26.3 12.9 42 547-588 41-86 (319)
244 CHL00194 ycf39 Ycf39; Provisio 24.9 62 0.0013 35.1 3.2 33 255-316 1-33 (317)
245 PF04844 Ovate: Transcriptiona 24.6 1.2E+02 0.0027 24.9 4.0 49 199-249 2-52 (59)
246 COG1519 KdtA 3-deoxy-D-manno-o 24.4 5.4E+02 0.012 29.5 10.4 102 549-671 51-153 (419)
247 PF10649 DUF2478: Protein of u 23.6 7.3E+02 0.016 24.6 14.0 108 294-415 18-132 (159)
248 PF13407 Peripla_BP_4: Peripla 23.5 4.2E+02 0.0092 27.0 9.1 38 636-673 51-89 (257)
249 KOG2452 Formyltetrahydrofolate 23.3 86 0.0019 35.8 3.8 39 255-324 1-39 (881)
250 PRK11519 tyrosine kinase; Prov 23.2 1.3E+03 0.029 28.3 14.6 45 371-415 623-669 (719)
251 PF03358 FMN_red: NADPH-depend 23.2 1.2E+02 0.0026 28.8 4.6 35 255-307 1-35 (152)
252 PRK13288 pyrophosphatase PpaX; 23.0 6.3E+02 0.014 25.3 10.1 120 559-700 83-210 (214)
253 COG0373 HemA Glutamyl-tRNA red 22.8 1.2E+03 0.026 26.8 15.7 111 580-725 203-319 (414)
254 TIGR01286 nifK nitrogenase mol 22.6 1.2E+03 0.025 27.7 13.3 99 558-671 191-316 (515)
255 PLN02778 3,5-epimerase/4-reduc 22.6 84 0.0018 34.0 3.6 31 252-307 7-37 (298)
256 COG1618 Predicted nucleotide k 22.4 1.9E+02 0.0041 29.0 5.5 72 631-704 92-175 (179)
257 PRK13478 phosphonoacetaldehyde 22.2 8E+02 0.017 25.7 11.1 99 558-675 101-207 (267)
258 PRK13398 3-deoxy-7-phosphohept 22.1 9.9E+02 0.022 25.6 12.0 110 551-672 28-142 (266)
259 TIGR02853 spore_dpaA dipicolin 21.6 4E+02 0.0087 28.8 8.6 55 294-352 15-71 (287)
260 PRK07742 phosphate butyryltran 21.4 5.6E+02 0.012 27.9 9.7 81 549-649 16-99 (299)
261 COG0569 TrkA K+ transport syst 21.0 5.7E+02 0.012 26.5 9.3 34 382-415 65-102 (225)
262 PF03668 ATP_bind_2: P-loop AT 20.8 3E+02 0.0064 30.0 7.2 122 155-307 123-275 (284)
263 PRK08057 cobalt-precorrin-6x r 20.5 7.1E+02 0.015 26.4 10.0 23 652-674 203-225 (248)
264 PRK10360 DNA-binding transcrip 20.3 7.7E+02 0.017 23.6 11.1 74 631-704 37-116 (196)
265 KOG0853 Glycosyltransferase [C 20.3 2.8E+02 0.0061 32.5 7.3 101 445-579 204-304 (495)
266 PRK02122 glucosamine-6-phospha 20.2 95 0.0021 37.8 3.7 42 251-315 366-407 (652)
267 PRK00346 surE 5'(3')-nucleotid 20.0 1.1E+03 0.023 25.2 11.6 35 381-415 80-125 (250)
No 1
>PLN00142 sucrose synthase
Probab=100.00 E-value=5.4e-193 Score=1675.29 Aligned_cols=778 Identities=79% Similarity=1.275 Sum_probs=752.8
Q ss_pred hHHHHHHHhcCCcccchhHHHHHHHhhh--hhhhccccCCcHHHHHhhcceeeEcCCeEEEEEcCCCceEEEEEEecCcc
Q 003962 6 CFLCCRIEGKGKGILQNHQLIAEFESIS--EENRKHLTEGAFGEVLRATQEAIVLPPWVALAVRPRPGVWEYIRVNVHAL 83 (783)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (783)
+.|+++|+++||++|++|||+++|+++. +.++.++.+|+||++|++||||||.|||||||||||||+|||||||++||
T Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~r~~~~~~~~~~~~~~~l 108 (815)
T PLN00142 29 KALLSRYVAQGKGILQPHQLIDELEAVIDDDEERKKLLDGPFGDILRSTQEAIVLPPFVALAVRPRPGVWEYVRVNVSEL 108 (815)
T ss_pred HHHHHHHHhcCCCcccHHHHHHHHHHHhhhhhhhhhhccCcHHHHHHhhhhhhccCCeeEEEEcCCCcceEEEEEEhhhC
Confidence 5689999999999999999999999994 44577899999999999999999999999999999999999999999999
Q ss_pred eeeecCHHHHhhhcccccCCcCCCCceeeeeccccccCCCCCCCCCCCCchhhhhhHhhhhhhcCCCCCchhHHHHHhhc
Q 003962 84 VVEELLVAEYLHFKEELVDGGSNGNFVLELDFEPFNASFPRPTLSKSIGNGVEFLNRHLSAKLFHDKESMHPLLEFLRVH 163 (783)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (783)
+||+|||+|||+|||+|||++.+++++|||||+|||++|||+|+|+||||||+|||||||||||+|++++++||||||+|
T Consensus 109 ~~~~~~~~~yl~~ke~~~~~~~~~~~~le~d~~pf~~~~p~~~~~~~ig~g~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 188 (815)
T PLN00142 109 SVEELTVSEYLKFKEELVDGSWNDNFVLELDFEPFNASFPRPTLSSSIGNGVQFLNRHLSSKLFRDKESLEPLLDFLRAH 188 (815)
T ss_pred ceeeecHHHhhhhhHhhcCcccCCCceEEEecccccccCCCCCCcccccccHHHHHHHHHHhhccCchhhhhHHHHHHHh
Confidence 99999999999999999999889999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCeeeecccCCCChHHHHHHHHHHHHHhhcCCCCCCchHHHHHhhhcCcccCCCCcHHHHHHHHHHHHHhhcCCChhc
Q 003962 164 CHKGKNMMLNDRIQNLNSLQHVLRKAEEYLTTVVPETPFSELALRFQEIGLERGWGDTAERALEMIQLLLDLLEAPDPCT 243 (783)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~p~~~~ 243 (783)
+|+|++|||||||+|+++||++|++|++||+++|+||||++|+++||+|||||||||||+||+|||++|+|+|++|||++
T Consensus 189 ~~~g~~~~~~~~~~~~~~l~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~g~~~gwg~~~~~~~~~~~~l~~~~~~p~~~~ 268 (815)
T PLN00142 189 NHKGETLMLNDRIQTLSKLQSALRKAEEYLSKLPKDTPYSEFEHRFQELGLEKGWGDTAERVLETIHLLLDLLQAPDPST 268 (815)
T ss_pred hcCCceeeecCCCCCHHHHHHHHHHHHHHHHhCCCCCCchHHHHHHHHhCCCCCcCccHHHHHHHHHHHHHHHhCCChhH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhccCCCcceEEEEcccccccccCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHHCCCceeeceeEEeCCCCCCCCC
Q 003962 244 LETFLGRIPMVFNVVILTPHGYFAQDDVLGYPDTGGQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRLLPDAVGT 323 (783)
Q Consensus 244 ~~~f~~~~pm~~rI~iis~h~~~~~~~~lg~p~tGG~~vyv~d~araL~~eLa~~L~~~GheV~~~i~VvT~~~~~~~g~ 323 (783)
||+|++||||+|||+|||+||||+|.+++|+||||||++||+|||||||++|+++|+++||+|+|+|+|+||.+++..|+
T Consensus 269 ~e~f~~~~p~~~~i~~iS~Hg~~~~~~~lG~~DtGGQ~vYVl~~aral~~el~~~l~~~G~~v~~~v~i~TR~i~~~~~~ 348 (815)
T PLN00142 269 LEKFLGRIPMVFNVVIFSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKQQGLDIKPQILIVTRLIPDAKGT 348 (815)
T ss_pred HHHHHhhhhHhHhhheecccccccccccCCCCCCCCceehHHHHHHHHHHHHHHHHHhcCCCccceeEEEEeccCCccCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccceeeeecCccCeEEEEeccCCCccccccccccccchhhHHHHHHHHHHHHHHHcCCCceEEEEcCCCchHHHHHHHH
Q 003962 324 TCGQRLEKVYGTKYSDILRVPFRTEKGVVRKWISRFEVWPYLETYTEDVAVEIAKELQGKPDLIIGNYSDGNIVASLLAH 403 (783)
Q Consensus 324 ~~~~~~e~i~~~~~v~Ilrvp~~~~~~~~~~~isr~~i~~~l~~f~~~~~~~l~~~l~~~pDIIh~h~~~~~lva~llar 403 (783)
+|+++.|.+.++++++|+|+|+++.++++++|++|+++|||+..|+.++.+.+.++.+++||+||+|||+++++|.++++
T Consensus 349 ~~~~~~e~v~~~~~~~I~rvP~g~~~~~l~~~i~ke~l~p~L~~f~~~~~~~~~~~~~~~PDlIHaHYwdsg~vA~~La~ 428 (815)
T PLN00142 349 TCNQRLEKVSGTEHSHILRVPFRTEKGILRKWISRFDVWPYLETFAEDAASEILAELQGKPDLIIGNYSDGNLVASLLAH 428 (815)
T ss_pred cccCcceeccCCCceEEEecCCCCCccccccccCHHHHHHHHHHHHHHHHHHHHHhcCCCCCEEEECCccHHHHHHHHHH
Confidence 99999999999999999999999977899999999999999999999999998877778999999999999999999999
Q ss_pred hcCCcEEEEecCCCccCCCCCchhhhhccccccccchhhHhHHhhhcCCEEEcCCHHHHhhccccccccccccccccccc
Q 003962 404 KLGVTQCTIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGL 483 (783)
Q Consensus 404 ~lgvp~v~t~H~l~~~~~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~~~~~~~~v~qy~~~~~f~~p~l 483 (783)
++|||+|+|+|++++.|+..++.+|+..++.|+|++++++|.++++.||+||++|.++++++++.++||++|.+||||++
T Consensus 429 ~lgVP~v~T~HsL~k~K~~~~~~~~~~~e~~y~~~~r~~aE~~a~~~Ad~IIasT~qEi~g~~~~i~qy~sh~~f~~p~L 508 (815)
T PLN00142 429 KLGVTQCTIAHALEKTKYPDSDIYWKKFDDKYHFSCQFTADLIAMNHADFIITSTYQEIAGSKDTVGQYESHTAFTLPGL 508 (815)
T ss_pred HhCCCEEEEcccchhhhccccCCcccccchhhhhhhchHHHHHHHHhhhHHHhCcHHHHhcccchhhhhhcccccccchh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeeeccCCCCCCcEEEecCCccCCCCCCCchHHHhhccCchhhHHhhcChhhhhhhhccccCCCCcEEEEEecccCCCCH
Q 003962 484 YRVVHGIDVFDPKFNIVSPGADMSIYFPYTEEKRRLKSFHPEIEELLYSDVENKEHLCVLKDRNKPILFTMARLDRVKNL 563 (783)
Q Consensus 484 ~~v~~gi~~~~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~~~~~l~~~~~~~~~~gll~~~~k~iIl~vGRL~~~Kgl 563 (783)
|++++|++++++|++|||||+|.+.|.|+.....+.+.+++.|++++|++.+.++++|++.++++++|+++||+++.||+
T Consensus 509 ~rvv~GId~~~~ki~VVppGvD~~~F~P~~~~~~rl~~l~n~I~~~l~~~~~~~e~lg~l~~~~kpvIl~VGRL~~~KGi 588 (815)
T PLN00142 509 YRVVHGIDVFDPKFNIVSPGADMSIYFPYTEKQKRLTSLHPSIEELLYSPEQNDEHIGYLKDRKKPIIFSMARLDRVKNL 588 (815)
T ss_pred hhhhccccccccCeeEECCCCChhhcCCCChHHhhHHhhcccchhhcCChHHHHHHhCCccCCCCcEEEEEecCcccCCH
Confidence 99999999999999999999999999999888888888999999999999999999998878889999999999999999
Q ss_pred HHHHHHHHHhHccCCCeEEEEEeCCCC-CCCccHHHHHHHHHHHHHHHHcCCCCcEEEccCCCCcCChHHHHHHHHccCc
Q 003962 564 TGLVEWYGKNAKLRELVNLVVVGGDRR-KESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKG 642 (783)
Q Consensus 564 ~~LieA~~~l~~~~~~~~LvIVG~g~~-~~~~~~ee~~~~~~l~~li~~~~L~~~V~flG~~~~~~~~~el~~~ia~aad 642 (783)
+.|++|++++.+.+++++|+|+|++.+ ..+.+.++.+++++++++++++++.++|+|+|.+.+..+.+++|+++++++|
T Consensus 589 d~LIeA~a~l~~l~~~~~LVIVGgg~d~~~s~d~ee~~el~~L~~La~~lgL~~~V~flG~~~~~~~~~eLyr~iadaaD 668 (815)
T PLN00142 589 TGLVEWYGKNKRLRELVNLVVVGGFIDPSKSKDREEIAEIKKMHSLIEKYNLKGQFRWIAAQTNRVRNGELYRYIADTKG 668 (815)
T ss_pred HHHHHHHHHHHHhCCCcEEEEEECCccccccccHHHHHHHHHHHHHHHHcCCCCcEEEcCCcCCcccHHHHHHHHHhhCC
Confidence 999999999988888999999999843 3445667777888999999999999999999988888888999999997789
Q ss_pred EEEeCCCCCCCcHHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHHHHHHHHHHHHHHhhCCHHHHHHHHHHHH
Q 003962 643 AFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGL 722 (783)
Q Consensus 643 vfV~PS~~E~fGltvlEAMa~GlPVVat~~GG~~EiI~dg~~G~li~p~d~e~lAeaI~~~l~~l~~dp~~~~~ms~~a~ 722 (783)
+||+||.+|+||++++||||||+|||+|+.||+.|+|.+|++|++++|+|++++|++|.+++++|..|++.|++|+++|+
T Consensus 669 VfVlPS~~EgFGLvvLEAMA~GlPVVATdvGG~~EIV~dG~tG~LV~P~D~eaLA~aI~~lLekLl~Dp~lr~~mg~~Ar 748 (815)
T PLN00142 669 AFVQPALYEAFGLTVVEAMTCGLPTFATCQGGPAEIIVDGVSGFHIDPYHGDEAANKIADFFEKCKEDPSYWNKISDAGL 748 (815)
T ss_pred EEEeCCcccCCCHHHHHHHHcCCCEEEcCCCCHHHHhcCCCcEEEeCCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999889999999999999999
Q ss_pred HHHHHhCCHHHHHHHHHHHHHHhcchhhhcchhHHHhhhHHHHHHHhhcccccccCCccCC
Q 003962 723 KRIEEKYTWKIYSQRLLTLTGVYGFWKHVSNLDRLESRRYLEMFYALKYRKLAESVPLAVE 783 (783)
Q Consensus 723 ~~v~~~ysw~~~a~~ll~ly~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 783 (783)
+++.++|||+.++++++++..+||||+++++++|++++|||||||+||||+||++||+++|
T Consensus 749 ~rv~e~FSWe~~A~rll~L~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~ 809 (815)
T PLN00142 749 QRIYECYTWKIYAERLLTLGGVYGFWKYVSKLERRETRRYLEMFYNLKFRELAKTVPLAVD 809 (815)
T ss_pred HHHHHhCCHHHHHHHHHHHHhhcchhhhcchHhHHHHHHHHHHHHHhhhHHHhhcCCcccc
Confidence 9999999999999999999999999999999999999999999999999999999999976
No 2
>TIGR02470 sucr_synth sucrose synthase. This model represents sucrose synthase, an enzyme that, despite its name, generally uses rather produces sucrose. Sucrose plus UDP (or ADP) becomes D-fructose plus UDP-glucose (or ADP-glucose), which is then available for cell wall (or starch) biosynthesis. The enzyme is homologous to sucrose phosphate synthase, which catalyzes the penultimate step in sucrose synthesis. Sucrose synthase is found, so far, exclusively in plants and cyanobacteria.
Probab=100.00 E-value=2.7e-191 Score=1661.85 Aligned_cols=776 Identities=74% Similarity=1.210 Sum_probs=749.4
Q ss_pred hHHHHHHHhcCCcccchhHHHHHHHhhh--hhhhccccCCcHHHHHhhcceeeEcCCeEEEEEcCCCceEEEEEEecCcc
Q 003962 6 CFLCCRIEGKGKGILQNHQLIAEFESIS--EENRKHLTEGAFGEVLRATQEAIVLPPWVALAVRPRPGVWEYIRVNVHAL 83 (783)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (783)
+.|+++|+++||++||+|||+++|++++ +.++.++.+|+||++|++||||||.|||||||||||||+|||||||++||
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qe~~~~~~~~~~~~r~~~~~~~~~~~~~~~l 84 (784)
T TIGR02470 5 RQLLSRYVSQGKRYLLRHQLLDEFEQYCSDADKEKKLSESALGKLIFSTQEAIVLPPWVALAVRPRIGVWEYVRVNVEEL 84 (784)
T ss_pred HHHHHHHHhcCCCcccHHHHHHHHHHHhhhhhhhhhhccCcHHHHHHhhhhheecCCeeEEEEcCCCcceEEEEEEhhhC
Confidence 5789999999999999999999999995 33466899999999999999999999999999999999999999999999
Q ss_pred eeeecCHHHHhhhcccccCCcCCCCceeeeeccccccCCCCCCCCCCCCchhhhhhHhhhhhhcCCCCCchhHHHHHhhc
Q 003962 84 VVEELLVAEYLHFKEELVDGGSNGNFVLELDFEPFNASFPRPTLSKSIGNGVEFLNRHLSAKLFHDKESMHPLLEFLRVH 163 (783)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (783)
+||+|||+|||+|||+|||++.+++++|||||+|||++||+|++||||||||+|||||||||||+|++++++||||||.|
T Consensus 85 ~~~~~~~~~yl~~ke~~~~~~~~~~~~le~d~~pf~~~~p~~~~~~~ig~g~~~~~r~~s~~~~~~~~~~~~~~~~l~~~ 164 (784)
T TIGR02470 85 SVEELTISEYLDFKEQLVNGHPNDGFVLELDFEPFNASFPRPSDSKSIGNGVQFLNRHLSSKLFQDPESMEPLLNFLRVH 164 (784)
T ss_pred ceeeecHHHHhhhhHhhcCcccCCCceEEEecccccccCCCCCCcccccccHHHHHHHHHHHhcCCchhhhhHHHHHHHh
Confidence 99999999999999999999889999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCeeeecccCCCChHHHHHHHHHHHHHhhcCCCCCCchHHHHHhhhcCcccCCCCcHHHHHHHHHHHHHhhcCCChhc
Q 003962 164 CHKGKNMMLNDRIQNLNSLQHVLRKAEEYLTTVVPETPFSELALRFQEIGLERGWGDTAERALEMIQLLLDLLEAPDPCT 243 (783)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~p~~~~ 243 (783)
+|+|++|||||||+|+++||++|++|++||+++|+||||++|+++||+|||||||||||+||+|||++|+|+|++|||++
T Consensus 165 ~~~g~~~~~~~~~~~~~~l~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~g~~~gwg~~~~~~~~~~~~l~~~~~~p~~~~ 244 (784)
T TIGR02470 165 NYNGIQLMINDRIQSVSHLQSQLRKAEEFLSALPPDTPYSEFEFELQELGFEPGWGDTAQRVLETLHLLDDLLEAPDPSV 244 (784)
T ss_pred ccCCceeeecCCCCCHHHHHHHHHHHHHHHHhCCCCCChhHHHHHHHHhCCCCCcCccHHHHHHHHHHHHHHHhCCChhH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhccCCCcceEEEEcccccccccCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHHCCCceeeceeEEeCCCCCCCCC
Q 003962 244 LETFLGRIPMVFNVVILTPHGYFAQDDVLGYPDTGGQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRLLPDAVGT 323 (783)
Q Consensus 244 ~~~f~~~~pm~~rI~iis~h~~~~~~~~lg~p~tGG~~vyv~d~araL~~eLa~~L~~~GheV~~~i~VvT~~~~~~~g~ 323 (783)
||+|++||||+|||+|||+||+|+|.+++|.||||||++||++||||||++|+++|+++||+|+|+|+|+||.+++..++
T Consensus 245 ~e~f~~~~p~~~rIa~lS~Hg~~~~~~~lG~~DtGGq~vYV~elaraL~~~~~~~La~~G~~v~~~V~I~TR~~~~~~~~ 324 (784)
T TIGR02470 245 LEAFLGRIPMVFNVVILSPHGYFGQENVLGLPDTGGQVVYILDQVRALENEMLQRIKLQGLEITPKILIVTRLIPDAEGT 324 (784)
T ss_pred HHHHHhhCCccceEEEEecccccCCccccCCCCCCCceeHHHHHHHHHHHHHHHHHHhcCCCccceEEEEecCCCCcccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999998899
Q ss_pred cccceeeeecCccCeEEEEeccCCCcc-ccccccccccchhhHHHHHHHHHHHHHHHcCCCceEEEEcCCCchHHHHHHH
Q 003962 324 TCGQRLEKVYGTKYSDILRVPFRTEKG-VVRKWISRFEVWPYLETYTEDVAVEIAKELQGKPDLIIGNYSDGNIVASLLA 402 (783)
Q Consensus 324 ~~~~~~e~i~~~~~v~Ilrvp~~~~~~-~~~~~isr~~i~~~l~~f~~~~~~~l~~~l~~~pDIIh~h~~~~~lva~lla 402 (783)
+|+++.+.+.++++++|+|+|+++..+ ++++|++++++|||+..|+.++.+++..+.+++||+||+|||+++++|.+++
T Consensus 325 ~~~~~~e~~~~~~~~~I~rvp~g~~~~~~~~~~i~k~~l~p~l~~f~~~~~~~~~~~~~~~pDlIHahy~d~glva~lla 404 (784)
T TIGR02470 325 TCNQRLEKVYGTEHAWILRVPFRTENGIILRNWISRFEIWPYLETFAEDAEKEILAELQGKPDLIIGNYSDGNLVASLLA 404 (784)
T ss_pred ccccccccccCCCceEEEEecCCCCcccccccccCHHHHHHHHHHHHHHHHHHHHHhcCCCCCEEEECCCchHHHHHHHH
Confidence 999999999999999999999999877 7999999999999999999999999887777899999999999999999999
Q ss_pred HhcCCcEEEEecCCCccCCCCCchhhhhccccccccchhhHhHHhhhcCCEEEcCCHHHHhhcccccccccccccccccc
Q 003962 403 HKLGVTQCTIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTFQEIAGSKDTVGQYESHTAFTLPG 482 (783)
Q Consensus 403 r~lgvp~v~t~H~l~~~~~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~~~~~~~~v~qy~~~~~f~~p~ 482 (783)
+++|||+|+|+|++++.++..++.+|...+.+|+++++++++.++++.||+|||+|+++++++++.++||++|..||||+
T Consensus 405 ~~lgVP~v~t~HsL~~~K~~~~g~~~~~~e~~~~~~~r~~ae~~~~~~AD~IItsT~qEi~~~~~~v~qY~s~~~ft~p~ 484 (784)
T TIGR02470 405 RKLGVTQCTIAHALEKTKYPDSDIYWQEFEDKYHFSCQFTADLIAMNAADFIITSTYQEIAGTKDSVGQYESHQAFTMPG 484 (784)
T ss_pred HhcCCCEEEECCcchhhcccccccccccchhHHHhhhhhhHHHHHHhcCCEEEECcHHHhhhhhhhhhhhhhcccccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ceeeeccCCCCCCcEEEecCCccCCCCCCCchHHHhhccCchhhHHhhcChhhhhhhhccccCCCCcEEEEEecccCCCC
Q 003962 483 LYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEEKRRLKSFHPEIEELLYSDVENKEHLCVLKDRNKPILFTMARLDRVKN 562 (783)
Q Consensus 483 l~~v~~gi~~~~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~~~~~l~~~~~~~~~~gll~~~~k~iIl~vGRL~~~Kg 562 (783)
+|++++|++++++|++|||||+|.+.|+|++...++....++.+++++|++++.++++|++.++++|+|+++||+++.||
T Consensus 485 Ly~vvnGid~~~~Ki~VVpPGVD~~iF~P~~~~~~r~~~~~~~ie~ll~~~~~~~~~~G~l~d~~kpiIl~VGRL~~~KG 564 (784)
T TIGR02470 485 LYRVVHGIDVFDPKFNIVSPGADESIYFPYSDKEKRLTNLHPEIEELLFSLEDNDEHYGYLKDPNKPIIFSMARLDRVKN 564 (784)
T ss_pred eeeeecCccCCcCCeEEECCCcChhhcCCCCchhhhhhhhhcchhhhccchhhHHHHhCCCCCCCCcEEEEEeCCCccCC
Confidence 99999999999999999999999999999988877877788999999999999999999988889999999999999999
Q ss_pred HHHHHHHHHHhHccCCCeEEEEEeCCCC-CCCccHHHHHHHHHHHHHHHHcCCCCcEEEccCCCCcCChHHHHHHHHccC
Q 003962 563 LTGLVEWYGKNAKLRELVNLVVVGGDRR-KESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTK 641 (783)
Q Consensus 563 l~~LieA~~~l~~~~~~~~LvIVG~g~~-~~~~~~ee~~~~~~l~~li~~~~L~~~V~flG~~~~~~~~~el~~~ia~aa 641 (783)
++.|++|+++++++.++++|+|+|++.+ ..+.+.++.+++++++++++++++.++|+|+|.+.+..+.+++|+++++++
T Consensus 565 id~LIeA~~~l~~l~~~~~LVIVGGg~~~~~s~d~ee~~~i~~L~~la~~~gL~g~V~flG~~~~~~~~~elyr~iAd~a 644 (784)
T TIGR02470 565 LTGLVECYGRSPKLRELVNLVVVAGKLDAKESKDREEQAEIEKMHNLIDQYQLHGQIRWIGAQLNRVRNGELYRYIADTK 644 (784)
T ss_pred HHHHHHHHHHhHhhCCCeEEEEEeCCcccccccchhHHHHHHHHHHHHHHhCCCCeEEEccCcCCcccHHHHHHHhhccC
Confidence 9999999999887778899999999865 455677888889999999999999999999998766778889999998878
Q ss_pred cEEEeCCCCCCCcHHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHHHHHHHHHHHHHHhhCCHHHHHHHHHHH
Q 003962 642 GAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGG 721 (783)
Q Consensus 642 dvfV~PS~~E~fGltvlEAMa~GlPVVat~~GG~~EiI~dg~~G~li~p~d~e~lAeaI~~~l~~l~~dp~~~~~ms~~a 721 (783)
|+||+||++|+||++++|||+||+|||||+.||+.|+|.+|.+|++++|+|++++|++|.+++++|..||+.|++|+++|
T Consensus 645 dVfV~PS~~EpFGLvvLEAMAcGlPVVAT~~GG~~EiV~dg~tGfLVdp~D~eaLA~aL~~ll~kll~dp~~~~~ms~~a 724 (784)
T TIGR02470 645 GIFVQPALYEAFGLTVLEAMTCGLPTFATRFGGPLEIIQDGVSGFHIDPYHGEEAAEKIVDFFEKCDEDPSYWQKISQGG 724 (784)
T ss_pred cEEEECCcccCCCHHHHHHHHcCCCEEEcCCCCHHHHhcCCCcEEEeCCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999988999999999999999
Q ss_pred HHHHHHhCCHHHHHHHHHHHHHHhcchhhhcchhHHHhhhHHHHHHHhhcccccccCCcc
Q 003962 722 LKRIEEKYTWKIYSQRLLTLTGVYGFWKHVSNLDRLESRRYLEMFYALKYRKLAESVPLA 781 (783)
Q Consensus 722 ~~~v~~~ysw~~~a~~ll~ly~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 781 (783)
++++.++|||+.++++++++..+||||+++++++|++++|||||||+|+|||||++||++
T Consensus 725 ~~rV~~~FSW~~~A~~ll~l~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~ 784 (784)
T TIGR02470 725 LQRIYEKYTWKIYSERLLTLAGIYGFWKFVSKLEREETRRYLEMFYHLKYRPLAEAVPLA 784 (784)
T ss_pred HHHHHHhCCHHHHHHHHHHHHhhhhHhhhccHHHHHHHHHHHHHHHHhhhHHHHhhccCC
Confidence 999999999999999999999999999999999999999999999999999999999975
No 3
>PF00862 Sucrose_synth: Sucrose synthase; InterPro: IPR000368 Sucrose synthases catalyse the synthesis of sucrose 2.4.1.13 from EC in the following reaction: UDP-glucose + D-fructose = UDP + sucrose This family includes the bulk of the sucrose synthase protein. However the carboxyl terminal region of the sucrose synthases belongs to the glycosyl transferase family IPR001296 from INTERPRO. This enzyme is found mainly in plants but also appears in bacteria.; GO: 0005985 sucrose metabolic process; PDB: 2R60_A 2R66_A 2R68_A 3S27_G 3S29_A 3S28_A.
Probab=100.00 E-value=5.2e-164 Score=1330.41 Aligned_cols=527 Identities=72% Similarity=1.187 Sum_probs=457.2
Q ss_pred hHHHHHHHhcCCcccchhHHHHHHHhhhhhhhc--cccCCcHHHHHhhcceeeEcCCeEEEEEcCCCceEEEEEEecCcc
Q 003962 6 CFLCCRIEGKGKGILQNHQLIAEFESISEENRK--HLTEGAFGEVLRATQEAIVLPPWVALAVRPRPGVWEYIRVNVHAL 83 (783)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (783)
..|++||+++||+|||||||+++|+++++++++ +..+|+||++|++||||||.|||||||||||||+|||||||+++|
T Consensus 22 ~~llsr~~~~gk~~l~r~~ll~ef~~~~~~~~~~~~~~~g~lg~ll~~tQEaIv~pp~v~lavRPrpg~WeyvRv~~~~L 101 (550)
T PF00862_consen 22 KRLLSRYVAQGKRYLLRHDLLDEFEAYCEDDKEKLFLLSGPLGELLRSTQEAIVLPPWVALAVRPRPGVWEYVRVNVDDL 101 (550)
T ss_dssp HHHHHHHHHHHTSSEEEECHHHHHTHHHHSTTTGCCT--STHHHHHHTEEEEEECSSEEEEEEEEETTEEEEEEEESSSS
T ss_pred HHHHHHHHHcCcccccHHHHHHHHHHHHhcccchhhcccchHHHHHHhcceeEecCCeEEEEEcCCCccEEEEEEEhhhC
Confidence 468999999999999999999999999876655 567899999999999999999999999999999999999999999
Q ss_pred eeeecCHHHHhhhcccccCCcCCCCceeeeeccccccCCCCCCCCCCCCchhhhhhHhhhhhhcCCCCCchhHHHHHhhc
Q 003962 84 VVEELLVAEYLHFKEELVDGGSNGNFVLELDFEPFNASFPRPTLSKSIGNGVEFLNRHLSAKLFHDKESMHPLLEFLRVH 163 (783)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (783)
+||+|||+|||+|||+|||++++++++|||||+|||++||+|++||||||||+|||||||||||+|++++++||||||.|
T Consensus 102 ~vE~ltvseyL~fKE~LV~~~~~~~~vLElDf~PFn~~~Prlt~s~sIGnGv~FLNR~LSsklf~d~e~~~~Ll~fL~~h 181 (550)
T PF00862_consen 102 SVEELTVSEYLKFKERLVDGSANDEFVLELDFEPFNASFPRLTDSSSIGNGVQFLNRHLSSKLFQDKESLEPLLDFLRVH 181 (550)
T ss_dssp EEEEE-HHHHHHHHHHHHHSS-SSTTS-EEE-GGGHTTS----SGGGTTBHHHHHHHHHHHHHTT-HHHHHHHHHHHHH-
T ss_pred cceecCHHHHHHHHHHHcCCccCCCCeeeeecccccccCCCCCCcccccccHHHHHHHHHHHhcCChHHHHHHHHHHHHh
Confidence 99999999999999999999989999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCeeeecccCCCChHHHHHHHHHHHHHhhcCCCCCCchHHHHHhhhcCcccCCCCcHHHHHHHHHHHHHhhcCCChhc
Q 003962 164 CHKGKNMMLNDRIQNLNSLQHVLRKAEEYLTTVVPETPFSELALRFQEIGLERGWGDTAERALEMIQLLLDLLEAPDPCT 243 (783)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~p~~~~ 243 (783)
+|+|++|||||||+|+++||+||++|++||+++|+||||++|+++||+|||||||||||+||+|||++|+|+|+||||++
T Consensus 182 ~~~G~~Lmlndri~s~~~L~~aL~~A~~~L~~~p~~tpy~~f~~~~q~~Gfe~GWG~ta~rv~et~~lL~dll~aPdp~~ 261 (550)
T PF00862_consen 182 NYNGQQLMLNDRIQSVSKLQSALRKAEEFLSKLPPDTPYSEFEHKLQELGFEPGWGDTAERVLETMHLLSDLLEAPDPST 261 (550)
T ss_dssp EETTEEBSB-TT--SHHHHHHHHHHHHHHHHHS-TT-BHHHHHHHHHHHTB-B-S-SBHHHHHHHHHHHHHHHHS--HHH
T ss_pred ccCCeEeeecCCCCCHHHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHHHHHhCCCchH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhccCCCcceEEEEcccccccccCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHHCCCceeeceeEEeCCCCCCCCC
Q 003962 244 LETFLGRIPMVFNVVILTPHGYFAQDDVLGYPDTGGQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRLLPDAVGT 323 (783)
Q Consensus 244 ~~~f~~~~pm~~rI~iis~h~~~~~~~~lg~p~tGG~~vyv~d~araL~~eLa~~L~~~GheV~~~i~VvT~~~~~~~g~ 323 (783)
||+|++||||+++||++||||||+|+||+|+||||||++||+|||||||++|..+++.+|.+|.|+|+|+||.+|++.|+
T Consensus 262 LE~Fl~RiPmvf~vvliSpHG~f~q~nvLG~pDTGGQVvYVleqarALe~e~~~ri~~~gl~i~p~i~i~TRlIpd~~~t 341 (550)
T PF00862_consen 262 LEKFLSRIPMVFNVVLISPHGYFGQENVLGRPDTGGQVVYVLEQARALENEMLYRIKLQGLDITPKIDIVTRLIPDAKGT 341 (550)
T ss_dssp HHHHHHHS---SEEEEE--SS--STTSTTSSTTSSHHHHHHHHHHHHHHHHTHHHHHHTT-----EEEEEEE--TBTTCG
T ss_pred HHHHhhhcceeEEEEEEcCccccccccccCCCCCCCcEEEEeHHHHHHHHHHHHHHHhcCCCCCCceeeecccccCCcCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccceeeeecCccCeEEEEeccCCCccccccccccccchhhHHHHHHHHHHHHHHHcCCCceEEEEcCCCchHHHHHHHH
Q 003962 324 TCGQRLEKVYGTKYSDILRVPFRTEKGVVRKWISRFEVWPYLETYTEDVAVEIAKELQGKPDLIIGNYSDGNIVASLLAH 403 (783)
Q Consensus 324 ~~~~~~e~i~~~~~v~Ilrvp~~~~~~~~~~~isr~~i~~~l~~f~~~~~~~l~~~l~~~pDIIh~h~~~~~lva~llar 403 (783)
+|+++++++.+++|++|+||||++.+|++++|+||+++|||++.|+.++.+++.++++++||+||+||+++|++|+++++
T Consensus 342 ~~~q~le~~~gt~~a~IlRvPF~~~~gi~~kwisrf~lWPyLe~fa~d~~~~i~~e~~~~PdlI~GnYsDgnlvA~LLs~ 421 (550)
T PF00862_consen 342 TCNQRLEKVSGTENARILRVPFGPEKGILRKWISRFDLWPYLEEFADDAEREILAELQGKPDLIIGNYSDGNLVASLLSR 421 (550)
T ss_dssp GGTSSEEEETTESSEEEEEE-ESESTEEE-S---GGG-GGGHHHHHHHHHHHHHHHHTS--SEEEEEHHHHHHHHHHHHH
T ss_pred CccccccccCCCCCcEEEEecCCCCcchhhhccchhhchhhHHHHHHHHHHHHHHHhCCCCcEEEeccCcchHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcCCcEEEEecCCCccCCCCCchhhhhccccccccchhhHhHHhhhcCCEEEcCCHHHHhhccccccccccccccccccc
Q 003962 404 KLGVTQCTIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGL 483 (783)
Q Consensus 404 ~lgvp~v~t~H~l~~~~~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~~~~~~~~v~qy~~~~~f~~p~l 483 (783)
++|+|+|+|+|+++++||+.++++|+.++.+|||+||+++|.++|++||+|||||+|++++.++.+|||+||.+||||||
T Consensus 422 ~lgv~~~~iaHsLek~Ky~~s~~~w~e~e~~Yhfs~qftAd~iamn~adfIItST~QEI~g~~~~~gqyes~~~ftlpgL 501 (550)
T PF00862_consen 422 KLGVTQCFIAHSLEKTKYEDSDLYWKEIEEKYHFSCQFTADLIAMNAADFIITSTYQEIAGQKDTVGQYESHKAFTLPGL 501 (550)
T ss_dssp HHT-EEEEE-SS-HHHHHHTTTTTSHHHHHHH-HHHHHHHHHHHHHHSSEEEESSHHHHHB-SSSBHTTGGGSSEEETTT
T ss_pred hcCCceehhhhccccccccccCCCHHHHHhhccchhhhhHHHHHhhcCCEEEEcchHhhcCCccccCCccchhhcchHhH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeeeccCCCCCCcEEEecCCccCCCCCCCchHHHhhccCchhhHHhhcC
Q 003962 484 YRVVHGIDVFDPKFNIVSPGADMSIYFPYTEEKRRLKSFHPEIEELLYS 532 (783)
Q Consensus 484 ~~v~~gi~~~~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~~~~~l~~ 532 (783)
||+++||++|+|||+|||||+|.++|+|++.+++|++.+|++|+++||+
T Consensus 502 yrvv~Gi~vFdPkfNiv~PGad~~iyFpyt~~~~Rl~~~~~~ie~Llfs 550 (550)
T PF00862_consen 502 YRVVNGIDVFDPKFNIVSPGADESIYFPYTEKERRLTSLHPEIEELLFS 550 (550)
T ss_dssp EEEEES--TT-TTEEE------TTTS--TT-TTTS-GGGHHHHHHHHH-
T ss_pred HhhhccccccCCcccccCCCCCcceecCCccccccchhhhHHHHHHhcC
Confidence 9999999999999999999999999999999999999999999999985
No 4
>TIGR02468 sucrsPsyn_pln sucrose phosphate synthase/possible sucrose phosphate phosphatase, plant. Members of this family are sucrose-phosphate synthases of plants. This enzyme is known to exist in multigene families in several species of both monocots and dicots. The N-terminal domain is the glucosyltransferase domain. Members of this family also have a variable linker region and a C-terminal domain that resembles sucrose phosphate phosphatase (SPP) (EC 3.1.3.24) (see TIGR01485), the next and final enzyme of sucrose biosynthesis. The SPP-like domain likely serves a binding and not a catalytic function, as the reported SPP is always encoded by a distinct protein.
Probab=100.00 E-value=1.3e-58 Score=552.07 Aligned_cols=455 Identities=26% Similarity=0.463 Sum_probs=356.0
Q ss_pred CcceEEEEcccccccccCC-CC-CCCCCcchhhHHHHHHHHHHHHHHHHHHCC--CceeeceeEEeCCCCCC-CCCcccc
Q 003962 253 MVFNVVILTPHGYFAQDDV-LG-YPDTGGQVVYILDQVRALEDEMLLRIKQQG--LDITPQILIITRLLPDA-VGTTCGQ 327 (783)
Q Consensus 253 m~~rI~iis~h~~~~~~~~-lg-~p~tGG~~vyv~d~araL~~eLa~~L~~~G--heV~~~i~VvT~~~~~~-~g~~~~~ 327 (783)
+.|+|++||+||.|+.+++ +| .+|||||.+||. +||++|+++| |+|+ |+||...++ .+..|.+
T Consensus 168 ~~~~I~liS~HG~~~~~~~elg~~~DtGGq~vYV~--------ELAraLa~~~gv~~Vd----l~TR~~~~~~~~~~y~~ 235 (1050)
T TIGR02468 168 KKLYIVLISLHGLVRGENMELGRDSDTGGQVKYVV--------ELARALGSMPGVYRVD----LLTRQVSSPDVDWSYGE 235 (1050)
T ss_pred CceEEEEEccccCccccCcccCCCCCCCChHHHHH--------HHHHHHHhCCCCCEEE----EEeCCcCccccccccCC
Confidence 4689999999999998888 88 599999999999 5555568888 8999 999997643 3455777
Q ss_pred eeeee------------cCccCeEEEEeccCCCccccccccccccchhhHHHHHHHHHHHHHHH-------c----CCCc
Q 003962 328 RLEKV------------YGTKYSDILRVPFRTEKGVVRKWISRFEVWPYLETYTEDVAVEIAKE-------L----QGKP 384 (783)
Q Consensus 328 ~~e~i------------~~~~~v~Ilrvp~~~~~~~~~~~isr~~i~~~l~~f~~~~~~~l~~~-------l----~~~p 384 (783)
+.|.+ ...+|++|+|+|+++.. +++++..+|+|+..|+..+...+.+. . ...|
T Consensus 236 p~e~~~~~~~~~~~~~~~~~~g~rIvRip~GP~~----~~l~Ke~L~~~l~ef~d~~l~~~~~~~~~~~~~~~~~~~~~p 311 (1050)
T TIGR02468 236 PTEMLTPRSSENDGDEMGESSGAYIIRIPFGPRD----KYIPKEELWPYIPEFVDGALSHIVNMSKVLGEQIGSGHPVWP 311 (1050)
T ss_pred ccccccccccccccccccCCCCeEEEEeccCCCC----CCcCHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhccccCCCC
Confidence 76544 24469999999999763 35778999999999999988876531 1 1249
Q ss_pred eEEEEcCCCchHHHHHHHHhcCCcEEEEecCCCccCCC----CCchhhhhccccccccchhhHhHHhhhcCCEEEcCCHH
Q 003962 385 DLIIGNYSDGNIVASLLAHKLGVTQCTIAHALEKTKYP----DSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTFQ 460 (783)
Q Consensus 385 DIIh~h~~~~~lva~llar~lgvp~v~t~H~l~~~~~~----~s~~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~ 460 (783)
||||+|||+++.+|.++++.+|+|+|+|.|+++..+.. .....+......|++..++.+|..+++.||.|||+|.+
T Consensus 312 DvIHaHyw~sG~aa~~L~~~lgVP~V~T~HSLgr~K~~~ll~~g~~~~~~~~~~y~~~~Ri~~Ee~~l~~Ad~VIasT~q 391 (1050)
T TIGR02468 312 YVIHGHYADAGDSAALLSGALNVPMVLTGHSLGRDKLEQLLKQGRMSKEEINSTYKIMRRIEAEELSLDASEIVITSTRQ 391 (1050)
T ss_pred CEEEECcchHHHHHHHHHHhhCCCEEEECccchhhhhhhhcccccccccccccccchHHHHHHHHHHHHhcCEEEEeCHH
Confidence 99999999999999999999999999999999776643 23335566777889999999999999999999999999
Q ss_pred HHhhccccccccccccccccccceee-----eccCC---CCCCcEEEecCCccCCCCCCCchHHHhhccCchhhHHhhcC
Q 003962 461 EIAGSKDTVGQYESHTAFTLPGLYRV-----VHGID---VFDPKFNIVSPGADMSIYFPYTEEKRRLKSFHPEIEELLYS 532 (783)
Q Consensus 461 ~~~~~~~~v~qy~~~~~f~~p~l~~v-----~~gi~---~~~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~~~~~l~~ 532 (783)
++.. ||..|.+|. |.++++ .+|+. .+.+|+.|||||||.+.|.|......+... ..++....
T Consensus 392 E~~e------q~~lY~~~~-~~~~~~~~~~~~~gv~~~g~~~~ri~VIPpGVD~~~F~P~~~~~~~~~~---~~~~~~~~ 461 (1050)
T TIGR02468 392 EIEE------QWGLYDGFD-VILERKLRARARRGVSCYGRFMPRMAVIPPGMEFSHIVPHDGDMDGETE---GNEEHPAK 461 (1050)
T ss_pred HHHH------HHHHhccCC-chhhhhhhhhhcccccccccCCCCeEEeCCCCcHHHccCCCccccchhc---cccccccc
Confidence 9873 555555555 544443 23333 246799999999999999986432211000 00000000
Q ss_pred hh----hhhhhhccccCCCCcEEEEEecccCCCCHHHHHHHHHHhHccC--CCeEEEEEeCCCCCCCccHHHHHHHHHHH
Q 003962 533 DV----ENKEHLCVLKDRNKPILFTMARLDRVKNLTGLVEWYGKNAKLR--ELVNLVVVGGDRRKESKDLEEQAEMKKMY 606 (783)
Q Consensus 533 ~~----~~~~~~gll~~~~k~iIl~vGRL~~~Kgl~~LieA~~~l~~~~--~~~~LvIVG~g~~~~~~~~ee~~~~~~l~ 606 (783)
+. .....++ .++++++|+++||+++.||++.|++|++.+.+.. +++. +|+|++++..........+...+.
T Consensus 462 ~~~~~~~~l~r~~--~~pdkpvIL~VGRL~p~KGi~~LIeAf~~L~~l~~~~nL~-LIiG~gdd~d~l~~~~~~~l~~L~ 538 (1050)
T TIGR02468 462 PDPPIWSEIMRFF--TNPRKPMILALARPDPKKNITTLVKAFGECRPLRELANLT-LIMGNRDDIDEMSSGSSSVLTSVL 538 (1050)
T ss_pred ccchhhHHHHhhc--ccCCCcEEEEEcCCccccCHHHHHHHHHHhHhhccCCCEE-EEEecCchhhhhhccchHHHHHHH
Confidence 00 0011222 2678899999999999999999999999997643 3454 466876542111111234567788
Q ss_pred HHHHHcCCCCcEEEccCCCCcCChHHHHHHHHcc---CcEEEeCCCCCCCcHHHHHHHHcCCcEEEcCccccccccccCc
Q 003962 607 SLIDQYKLNGQFRWISSQMNRVRNGELYRYICDT---KGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGK 683 (783)
Q Consensus 607 ~li~~~~L~~~V~flG~~~~~~~~~el~~~ia~a---advfV~PS~~E~fGltvlEAMa~GlPVVat~~GG~~EiI~dg~ 683 (783)
++++++++.++|.|+| +++.+++..+|+.+ +|+||+||++|+||++++||||||+|||+|+.||+.|+|.++.
T Consensus 539 ~li~~lgL~g~V~FlG----~v~~edvp~lYr~Ad~s~DVFV~PS~~EgFGLvlLEAMAcGlPVVASdvGG~~EII~~g~ 614 (1050)
T TIGR02468 539 KLIDKYDLYGQVAYPK----HHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPMVATKNGGPVDIHRVLD 614 (1050)
T ss_pred HHHHHhCCCCeEEecC----CCCHHHHHHHHHHhhhcCCeeeCCcccCCCCHHHHHHHHhCCCEEEeCCCCcHHHhccCC
Confidence 9999999999999999 66778888888742 2799999999999999999999999999999999999999999
Q ss_pred eEEEECCCCHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHh
Q 003962 684 SGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEEKYTWKIYSQRLLTLTGVY 745 (783)
Q Consensus 684 ~G~li~p~d~e~lAeaI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~~~a~~ll~ly~~~ 745 (783)
+|++++|.|++++|++|..++ .|++.|++|+++|++++ ++|||+.++++|++++...
T Consensus 615 nGlLVdP~D~eaLA~AL~~LL----~Dpelr~~m~~~gr~~v-~~FSWe~ia~~yl~~i~~~ 671 (1050)
T TIGR02468 615 NGLLVDPHDQQAIADALLKLV----ADKQLWAECRQNGLKNI-HLFSWPEHCKTYLSRIASC 671 (1050)
T ss_pred cEEEECCCCHHHHHHHHHHHh----hCHHHHHHHHHHHHHHH-HHCCHHHHHHHHHHHHHHH
Confidence 999999999999999997665 89999999999999998 5799999999999998765
No 5
>KOG0853 consensus Glycosyltransferase [Cell wall/membrane/envelope biogenesis]
Probab=100.00 E-value=7.4e-59 Score=515.02 Aligned_cols=491 Identities=41% Similarity=0.643 Sum_probs=433.6
Q ss_pred ecccCCCChHHHHHHHHHHHHHhhcCCCCCCchHHHHHhhhcCcccCCCCcHHHHHHHHHHHHHhhcCCChhcHHHHhcc
Q 003962 171 MLNDRIQNLNSLQHVLRKAEEYLTTVVPETPFSELALRFQEIGLERGWGDTAERALEMIQLLLDLLEAPDPCTLETFLGR 250 (783)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~p~~~~~~~f~~~ 250 (783)
|.||++++...+|+.+.+|+..++.. .+||+..|.+.+++.++++|||.++.+|..++++++
T Consensus 1 ~~~~~~~~~~~~qk~~~~~m~~~~~~-~~t~~~~~~~~~~~~~~~~~gg~er~~v~~~~~l~s----------------- 62 (495)
T KOG0853|consen 1 MTNDSSSNISELQKVLWKAMIEKSLL-VSTPEKPFEHVTFIHPDLGIGGAERLVVDAAVHLLS----------------- 62 (495)
T ss_pred CcchhhhHHHHhhhhhhhhhhhhhcc-cccccccchhheeeccccccCchHHHhHHHHHHHHh-----------------
Confidence 78999999999999999999999999 999999999999999999999999999999999888
Q ss_pred CCCcceEEEEcccccccccCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHHCCCceeeceeEEeCCCCCCCCCcccceee
Q 003962 251 IPMVFNVVILTPHGYFAQDDVLGYPDTGGQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRLLPDAVGTTCGQRLE 330 (783)
Q Consensus 251 ~pm~~rI~iis~h~~~~~~~~lg~p~tGG~~vyv~d~araL~~eLa~~L~~~GheV~~~i~VvT~~~~~~~g~~~~~~~e 330 (783)
++. ++|.||+||+++|+++++++|+.+|..+..+.+.++++.|++++...|...| +..+
T Consensus 63 ----------------~~~-~lg~~d~G~qV~~l~~h~~al~~~~~~~~~~~~l~~~~~i~vv~~~lP~~~~----~~~~ 121 (495)
T KOG0853|consen 63 ----------------GQD-VLGLPDTGGQVVYLTSHEDALEMPLLLRCFAETLDGTPPILVVGDWLPRAMG----QFLE 121 (495)
T ss_pred ----------------ccc-ccCCCCCCceEEEEehhhhhhcchHHHHHHHHHhcCCCceEEEEeecCcccc----hhhh
Confidence 566 9999999999999999999999999999999999999999999999888765 4566
Q ss_pred eecCccCeEEEEeccCCCccccccccccccchhhHHHHHHHHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHhcCCcEE
Q 003962 331 KVYGTKYSDILRVPFRTEKGVVRKWISRFEVWPYLETYTEDVAVEIAKELQGKPDLIIGNYSDGNIVASLLAHKLGVTQC 410 (783)
Q Consensus 331 ~i~~~~~v~Ilrvp~~~~~~~~~~~isr~~i~~~l~~f~~~~~~~l~~~l~~~pDIIh~h~~~~~lva~llar~lgvp~v 410 (783)
...++.+++|+++|++ +..+|+ +..|+++..|+ .+...+.+.+++ ||++|.++++.+..+.+++.+.|++.+
T Consensus 122 ~~~~~~~~~il~~~~~----~~~k~~--~~~d~~i~d~~-~~~~~l~~~~~~-p~~~~~i~~~~h~~~~lla~r~g~~~~ 193 (495)
T KOG0853|consen 122 QVAGCAYLRILRIPFG----ILFKWA--EKVDPIIEDFV-SACVPLLKQLSG-PDVIIKIYFYCHFPDSLLAKRLGVLKV 193 (495)
T ss_pred hhhccceeEEEEeccc----hhhhhh--hhhceeecchH-HHHHHHHHHhcC-CcccceeEEeccchHHHhccccCccce
Confidence 6777789999999993 455677 78999999998 566778888777 999999999999999999999999999
Q ss_pred EEecCCCccCCCCCchhhhhccccccccchhhHhHHhhhcCCEEEcCCHHHHhhcccccccccccccccccc-ceeeecc
Q 003962 411 TIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTFQEIAGSKDTVGQYESHTAFTLPG-LYRVVHG 489 (783)
Q Consensus 411 ~t~H~l~~~~~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~~~~~~~~v~qy~~~~~f~~p~-l~~v~~g 489 (783)
.+.|.++..+++..+.+|+.+...|+++++|.++...++++| ++++++++++.....+||+++..+++|. .++.+++
T Consensus 194 l~~~~l~~~e~e~~~~~~~~~~ns~~~~~~f~~~~~~L~~~d--~~~~y~ei~~s~~~~~~~~~~~~~~~~~r~~~~v~~ 271 (495)
T KOG0853|consen 194 LYRHALDKIEEETTGLAWKILVNSYFTKRQFKATFVSLSNSD--ITSTYPEIDGSWFTYGQYESHLELRLPVRLYRGVSG 271 (495)
T ss_pred eehhhhhhhhhhhhhccceEecchhhhhhhhhhhhhhcCCCC--cceeeccccchhccccccccchhcccccceeeeecc
Confidence 999999999999999999999999999999999999999999 9999999999999999999999999997 8899999
Q ss_pred CCCCCCcEEEecCCccCCCCCCCchHHHhhccCchhhHHhhcChhhhhhhhccccCCCCcEEEEEecccCCCCHHHHHHH
Q 003962 490 IDVFDPKFNIVSPGADMSIYFPYTEEKRRLKSFHPEIEELLYSDVENKEHLCVLKDRNKPILFTMARLDRVKNLTGLVEW 569 (783)
Q Consensus 490 i~~~~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~~~~~l~~~~~~~~~~gll~~~~k~iIl~vGRL~~~Kgl~~LieA 569 (783)
++.+.++++++++|.|.+.+.|.-.. ++. .+ +.
T Consensus 272 ~d~~~~siN~~~pgkd~~l~l~a~~~------~~~----------------~i--~~----------------------- 304 (495)
T KOG0853|consen 272 IDRFFPSINRFEPGKDQDLALPAFTL------LHD----------------SI--PE----------------------- 304 (495)
T ss_pred cceEeeeeeecCCCCCceeehhhHHh------hhc----------------cc--CC-----------------------
Confidence 99999999999999999887762211 000 00 00
Q ss_pred HHHhHccCCCeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHHcCCCCcEEEccCCCCcCChHHHHHHHHccCcEEEeCCC
Q 003962 570 YGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPAL 649 (783)
Q Consensus 570 ~~~l~~~~~~~~LvIVG~g~~~~~~~~ee~~~~~~l~~li~~~~L~~~V~flG~~~~~~~~~el~~~ia~aadvfV~PS~ 649 (783)
...++.+++++|+. ...+.+.|+.++.++|+++++++++.++++|.-. ..+..+-|++++++..+|++|+.
T Consensus 305 -----~~~~~~hl~~~g~~-G~d~~~sen~~~~~el~~lie~~~l~g~~v~~~~---s~~~~~~yrl~adt~~v~~qPa~ 375 (495)
T KOG0853|consen 305 -----PSISSEHLVVAGSR-GYDERDSENVEYLKELLSLIEEYDLLGQFVWFLP---STTRVAKYRLAADTKGVLYQPAN 375 (495)
T ss_pred -----CCCCceEEEEecCC-CccccchhhHHHHHHHHHHHHHhCccCceEEEec---CCchHHHHHHHHhcceEEecCCC
Confidence 12245667777732 0235688999999999999999999765555532 33345669999998899999999
Q ss_pred CCCCcHHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHH---HHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHH
Q 003962 650 YEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGE---QAAEILVDFFEKCKADPSYWDKISLGGLKRIE 726 (783)
Q Consensus 650 ~E~fGltvlEAMa~GlPVVat~~GG~~EiI~dg~~G~li~p~d~e---~lAeaI~~~l~~l~~dp~~~~~ms~~a~~~v~ 726 (783)
|.||+|.+|||+||+|||||+.||+.|+|.++.+|++++| +.+ .+|+++ .+|..||++|.+|+++|+++++
T Consensus 376 -E~FGiv~IEAMa~glPvvAt~~GGP~EiV~~~~tG~l~dp-~~e~~~~~a~~~----~kl~~~p~l~~~~~~~G~~rV~ 449 (495)
T KOG0853|consen 376 -EHFGIVPIEAMACGLPVVATNNGGPAEIVVHGVTGLLIDP-GQEAVAELADAL----LKLRRDPELWARMGKNGLKRVK 449 (495)
T ss_pred -CCccceeHHHHhcCCCEEEecCCCceEEEEcCCcceeeCC-chHHHHHHHHHH----HHHhcCHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999 444 366666 6677999999999999999999
Q ss_pred HhCCHHHHHHHHHHHHHHhcchhhhcchhHHHhhhHHHHHHHhhcc
Q 003962 727 EKYTWKIYSQRLLTLTGVYGFWKHVSNLDRLESRRYLEMFYALKYR 772 (783)
Q Consensus 727 ~~ysw~~~a~~ll~ly~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~ 772 (783)
+.|||+.+.+++.++...+.+|+.++...+...+||++|||+|.||
T Consensus 450 e~fs~~~~~~ri~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 495 (495)
T KOG0853|consen 450 EMFSWQHYSERIASVLGKYLQWEKVSSLDSLEDRRYISLFYALSFR 495 (495)
T ss_pred HHHhHHHHHHHHHHHhHhcCCcccccccccccccccHHHHHHhhcC
Confidence 9999999999999999999999999999999999999999999986
No 6
>TIGR02472 sucr_P_syn_N sucrose-phosphate synthase, putative, glycosyltransferase domain. This family consists of the N-terminal regions, or in some cases the entirety, of bacterial proteins closely related to plant sucrose-phosphate synthases (SPS). The C-terminal domain (TIGR02471), found with most members of this family, resembles both bona fide plant sucrose-phosphate phosphatases (SPP) and the SPP-like domain of plant SPS. At least two members of this family lack the SPP-like domain, which may have binding or regulatory rather than enzymatic activity by analogy to plant SPS. This enzyme produces sucrose 6-phosphate and UDP from UDP-glucose and D-fructose 6-phosphate, and may be encoded near the gene for fructokinase.
Probab=100.00 E-value=2.3e-51 Score=466.88 Aligned_cols=426 Identities=31% Similarity=0.560 Sum_probs=315.7
Q ss_pred ceEEEEcccccccccC-CCCC-CCCCcchhhHHHHHHHHHHHHHHHHHHCCC--ceeeceeEEeCCCCCCC-CCccccee
Q 003962 255 FNVVILTPHGYFAQDD-VLGY-PDTGGQVVYILDQVRALEDEMLLRIKQQGL--DITPQILIITRLLPDAV-GTTCGQRL 329 (783)
Q Consensus 255 ~rI~iis~h~~~~~~~-~lg~-p~tGG~~vyv~d~araL~~eLa~~L~~~Gh--eV~~~i~VvT~~~~~~~-g~~~~~~~ 329 (783)
+||+++|+||+|+|.+ ++|+ |+.||+++|+. +|+++|+++|| +|+ |+|+..+... ++.+....
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~p~~GG~~~~v~--------~La~~L~~~G~~~~V~----v~t~~~~~~~~~~~~~~~~ 68 (439)
T TIGR02472 1 LYLLLLSLHGLIRGHDLELGRDADTGGQTKYVL--------ELARALARRSEVEQVD----LVTRLIKDAKVSPDYAQPI 68 (439)
T ss_pred CeEEEEeCCcCCCCCccccCCCCCCCCcchHHH--------HHHHHHHhCCCCcEEE----EEeccccCcCCCCccCCCe
Confidence 4799999999999999 6774 99999999999 67777899997 999 9998765421 12333333
Q ss_pred eeecCccCeEEEEeccCCCccccccccccccchhhHHHHHHHHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHhcCCcE
Q 003962 330 EKVYGTKYSDILRVPFRTEKGVVRKWISRFEVWPYLETYTEDVAVEIAKELQGKPDLIIGNYSDGNIVASLLAHKLGVTQ 409 (783)
Q Consensus 330 e~i~~~~~v~Ilrvp~~~~~~~~~~~isr~~i~~~l~~f~~~~~~~l~~~l~~~pDIIh~h~~~~~lva~llar~lgvp~ 409 (783)
+.+ .+++.++|+|+.+. .+.++...++++..+...+.+.+.+ ...+|||||+|++.++.++.++++..++|+
T Consensus 69 ~~~--~~gv~v~r~~~~~~-----~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~DvIH~h~~~~~~~~~~~~~~~~~p~ 140 (439)
T TIGR02472 69 ERI--APGARIVRLPFGPR-----RYLRKELLWPYLDELADNLLQHLRQ-QGHLPDLIHAHYADAGYVGARLSRLLGVPL 140 (439)
T ss_pred eEe--CCCcEEEEecCCCC-----CCcChhhhhhhHHHHHHHHHHHHHH-cCCCCCEEEEcchhHHHHHHHHHHHhCCCE
Confidence 322 35789999998653 2344556778877777665554433 234799999999888889999999999999
Q ss_pred EEEecCCCccCCC---CCchhhhhccccccccchhhHhHHhhhcCCEEEcCCHHHHhhccccccccccccccccccceee
Q 003962 410 CTIAHALEKTKYP---DSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRV 486 (783)
Q Consensus 410 v~t~H~l~~~~~~---~s~~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~~~~~~~~v~qy~~~~~f~~p~l~~v 486 (783)
|+|.|++...... .....+..+...|++......++.+++.+|.||++|.+++.. . +..
T Consensus 141 V~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~s~~~~~~---~---------------~~~ 202 (439)
T TIGR02472 141 IFTGHSLGREKRRRLLAAGLKPQQIEKQYNISRRIEAEEETLAHASLVITSTHQEIEE---Q---------------YAL 202 (439)
T ss_pred EEecccccchhhhhcccCCCChhhhhhhcchHHHHHHHHHHHHhCCEEEECCHHHHHH---H---------------HHh
Confidence 9999986432210 111112222223444444456778899999999999765431 0 111
Q ss_pred eccCCCCCCcEEEecCCccCCCCCCCchHHHhhccCchhhHHhhcChhhhhhhhccccCCCCcEEEEEecccCCCCHHHH
Q 003962 487 VHGIDVFDPKFNIVSPGADMSIYFPYTEEKRRLKSFHPEIEELLYSDVENKEHLCVLKDRNKPILFTMARLDRVKNLTGL 566 (783)
Q Consensus 487 ~~gi~~~~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~~~~~l~~~~~~~~~~gll~~~~k~iIl~vGRL~~~Kgl~~L 566 (783)
..+++ +.|+.+||||+|.+.|.|........ .+ ....+.++. ++++++|+++||+.+.||++.|
T Consensus 203 ~~~~~--~~ki~vIpnGvd~~~f~~~~~~~~~~-----~~-------~~~~~~~~~--~~~~~~i~~vGrl~~~Kg~~~l 266 (439)
T TIGR02472 203 YDSYQ--PERMQVIPPGVDLSRFYPPQSSEETS-----EI-------DNLLAPFLK--DPEKPPILAISRPDRRKNIPSL 266 (439)
T ss_pred ccCCC--ccceEEECCCcChhhcCCCCccccch-----hH-------HHHHHhhcc--ccCCcEEEEEcCCcccCCHHHH
Confidence 11333 67999999999999887753221100 00 000112333 4567899999999999999999
Q ss_pred HHHHHHhHccCCCeEEE-EEeCCCCCCCccHHHHHHHHHHHHHHHHcCCCCcEEEccCCCCcCChHHHHHHHHcc---Cc
Q 003962 567 VEWYGKNAKLRELVNLV-VVGGDRRKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDT---KG 642 (783)
Q Consensus 567 ieA~~~l~~~~~~~~Lv-IVG~g~~~~~~~~ee~~~~~~l~~li~~~~L~~~V~flG~~~~~~~~~el~~~ia~a---ad 642 (783)
++|++++.+..+..+++ |+|+|++..........+.+++..+++++++.++|+|+| .++.+++..+++.+ +|
T Consensus 267 i~A~~~l~~~~~~~~l~li~G~g~~~~~l~~~~~~~~~~~~~~~~~~~l~~~V~f~g----~~~~~~~~~~~~~a~~~~D 342 (439)
T TIGR02472 267 VEAYGRSPKLQEMANLVLVLGCRDDIRKMESQQREVLQKVLLLIDRYDLYGKVAYPK----HHRPDDVPELYRLAARSRG 342 (439)
T ss_pred HHHHHhChhhhhhccEEEEeCCccccccccHHHHHHHHHHHHHHHHcCCCceEEecC----CCCHHHHHHHHHHHhhcCC
Confidence 99998754332334444 567776532222222344566778899999999999999 66678888888742 39
Q ss_pred EEEeCCCCCCCcHHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHHHHHHHHHHHHHHhhCCHHHHHHHHHHHH
Q 003962 643 AFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGL 722 (783)
Q Consensus 643 vfV~PS~~E~fGltvlEAMa~GlPVVat~~GG~~EiI~dg~~G~li~p~d~e~lAeaI~~~l~~l~~dp~~~~~ms~~a~ 722 (783)
+||+||.+|+||++++||||||+|||+|+.||+.|+|.++.+|++++|+|++++|++|.+++ +|++.+++|+++++
T Consensus 343 v~v~pS~~E~fg~~~lEAma~G~PvV~s~~gg~~eiv~~~~~G~lv~~~d~~~la~~i~~ll----~~~~~~~~~~~~a~ 418 (439)
T TIGR02472 343 IFVNPALTEPFGLTLLEAAACGLPIVATDDGGPRDIIANCRNGLLVDVLDLEAIASALEDAL----SDSSQWQLWSRNGI 418 (439)
T ss_pred EEecccccCCcccHHHHHHHhCCCEEEeCCCCcHHHhcCCCcEEEeCCCCHHHHHHHHHHHH----hCHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999997666 89999999999999
Q ss_pred HHHHHhCCHHHHHHHHHHHH
Q 003962 723 KRIEEKYTWKIYSQRLLTLT 742 (783)
Q Consensus 723 ~~v~~~ysw~~~a~~ll~ly 742 (783)
+++.++|||+.++++|+++.
T Consensus 419 ~~~~~~fsw~~~~~~~~~l~ 438 (439)
T TIGR02472 419 EGVRRHYSWDAHVEKYLRIL 438 (439)
T ss_pred HHHHHhCCHHHHHHHHHHHh
Confidence 99999999999999999875
No 7
>PLN02939 transferase, transferring glycosyl groups
Probab=100.00 E-value=3.1e-46 Score=439.92 Aligned_cols=515 Identities=16% Similarity=0.196 Sum_probs=370.7
Q ss_pred CChHHHHHHHHHHHHHhhcCCCCCC--------chHHHHHhhhcCcccCCCCcHHHHHHHH---------HHHHHhhcCC
Q 003962 177 QNLNSLQHVLRKAEEYLTTVVPETP--------FSELALRFQEIGLERGWGDTAERALEMI---------QLLLDLLEAP 239 (783)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~r~~~~~---------~~~~~~~~~p 239 (783)
++++.+|+.|.+..+.-++...+.| |+++..++++|=+++-.+.+.+..+..| ....++.+.+
T Consensus 383 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lll~id~~~~~~~~~~~~a~~lr~~~~~~~~~~~~~~~~~~~~~ 462 (977)
T PLN02939 383 ESIKEFQDTLSKLKEESKKRSLEHPADDMPSEFWSRILLLIDGWLLEKKISNNDAKLLREMVWKRDGRIREAYLSCKGKN 462 (977)
T ss_pred HHHHHHHHHHHHHHhhhhcccccCchhhCCHHHHHHHHHHHHHHHHhccCChhhHHHHHHHHHhhhhhHHHHHHHHhcCc
Confidence 4688899999999999999888888 9999999999999999999999998888 4678889999
Q ss_pred ChhcHHHHhccC----CCcceEEEEcccccccccCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHHCCCceeeceeEEeC
Q 003962 240 DPCTLETFLGRI----PMVFNVVILTPHGYFAQDDVLGYPDTGGQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITR 315 (783)
Q Consensus 240 ~~~~~~~f~~~~----pm~~rI~iis~h~~~~~~~~lg~p~tGG~~vyv~d~araL~~eLa~~L~~~GheV~~~i~VvT~ 315 (783)
|...+..|+.-. .+.|||++||.--.|- ..|||..-++. .|.++|+++||+|. |+++
T Consensus 463 ~~~~~~~~~~~~~~~~~~~mkILfVasE~aP~-------aKtGGLaDVv~--------sLPkAL~~~GhdV~----VIlP 523 (977)
T PLN02939 463 EREAVENFLKLTLSGTSSGLHIVHIAAEMAPV-------AKVGGLADVVS--------GLGKALQKKGHLVE----IVLP 523 (977)
T ss_pred hHHHHHHHHHhccCCCCCCCEEEEEEcccccc-------cccccHHHHHH--------HHHHHHHHcCCeEE----EEeC
Confidence 999999988522 2569999999776643 57999999999 66667799999999 9999
Q ss_pred CCCCCCCCccc-c-----eee-eecC-----------ccCeEEEEeccCCCccccccccccccch---hhHHH--HHHHH
Q 003962 316 LLPDAVGTTCG-Q-----RLE-KVYG-----------TKYSDILRVPFRTEKGVVRKWISRFEVW---PYLET--YTEDV 372 (783)
Q Consensus 316 ~~~~~~g~~~~-~-----~~e-~i~~-----------~~~v~Ilrvp~~~~~~~~~~~isr~~i~---~~l~~--f~~~~ 372 (783)
.++........ . ... .+.+ .+|+.++.+.......+ ..+..++ .-.++ |+..+
T Consensus 524 ~Y~~i~~~~~~~~~~~~~~~~~~~~g~~~~~~v~~~~~~GV~vyfId~~~~~~f----F~R~~iYg~~Dn~~RF~~FsrA 599 (977)
T PLN02939 524 KYDCMQYDQIRNLKVLDVVVESYFDGNLFKNKIWTGTVEGLPVYFIEPQHPSKF----FWRAQYYGEHDDFKRFSYFSRA 599 (977)
T ss_pred CCcccChhhhhcccccceEEEEeecCceeEEEEEEEEECCeeEEEEecCCchhc----cCCCCCCCCccHHHHHHHHHHH
Confidence 87633200000 0 000 0000 12344443321000001 1111222 11122 34444
Q ss_pred HHHHHHHcCCCceEEEEcCCCchHHHHHHHHh------cCCcEEEEecCCCccCCCC-Cch-----hhhhcc--ccc--c
Q 003962 373 AVEIAKELQGKPDLIIGNYSDGNIVASLLAHK------LGVTQCTIAHALEKTKYPD-SDI-----YWKNLD--DKY--H 436 (783)
Q Consensus 373 ~~~l~~~l~~~pDIIh~h~~~~~lva~llar~------lgvp~v~t~H~l~~~~~~~-s~~-----~~~~~~--~~y--~ 436 (783)
.-++....+.+|||||||.|..++++.++.+. .++|.|+|+|++....... ..+ .+..+. ... .
T Consensus 600 aLe~~~~~~~~PDIIH~HDW~TaLV~pll~~~y~~~~~~~~ktVfTIHNl~yQG~f~~~~l~~lGL~~~~l~~~d~le~~ 679 (977)
T PLN02939 600 ALELLYQSGKKPDIIHCHDWQTAFVAPLYWDLYAPKGFNSARICFTCHNFEYQGTAPASDLASCGLDVHQLDRPDRMQDN 679 (977)
T ss_pred HHHHHHhcCCCCCEEEECCccHHHHHHHHHHHHhhccCCCCcEEEEeCCCcCCCcCCHHHHHHcCCCHHHccChhhhhhc
Confidence 44555555678999999999998876655432 3589999999986544221 111 111111 000 0
Q ss_pred ccchhhHhHHhhhcCCEEEcCCHHHHhhccccccccccccccccccceeeeccCCCCCCcEEEecCCccCCCCCCCchHH
Q 003962 437 FSCQFTADLIAMNHTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEEK 516 (783)
Q Consensus 437 f~~~~~~e~~a~~~AD~IIt~S~~~~~~~~~~v~qy~~~~~f~~p~l~~v~~gi~~~~~k~~VIpnGvD~~~f~p~~~~~ 516 (783)
+..++..-+.++..||.|+|+|+..+..+... +-++ |.+. +.....|+.+|+||||.+.|.|..+..
T Consensus 680 ~~~~iN~LK~GIv~AD~VtTVSptYA~EI~te-~G~G------L~~~------L~~~~~Kl~gIlNGID~e~wnPatD~~ 746 (977)
T PLN02939 680 AHGRINVVKGAIVYSNIVTTVSPTYAQEVRSE-GGRG------LQDT------LKFHSKKFVGILNGIDTDTWNPSTDRF 746 (977)
T ss_pred cCCchHHHHHHHHhCCeeEeeeHHHHHHHHHH-hccc------hHHH------hccccCCceEEecceehhhcCCccccc
Confidence 11222223446668999999999988755431 1110 1000 122367999999999999999876432
Q ss_pred HhhccCchhhHHhhcChhhhhhhhccccC-CCCcEEEEEecccCCCCHHHHHHHHHHhHccCCCeEEEEEeCCCCCCCcc
Q 003962 517 RRLKSFHPEIEELLYSDVENKEHLCVLKD-RNKPILFTMARLDRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKD 595 (783)
Q Consensus 517 ~r~~~~~~~~~~~l~~~~~~~~~~gll~~-~~k~iIl~vGRL~~~Kgl~~LieA~~~l~~~~~~~~LvIVG~g~~~~~~~ 595 (783)
-....-...++.+..++...++++|+..+ ++.|+|+++||+.+.||++.+++|+.++.+ ++++|+|+|+|+..
T Consensus 747 L~~~Ys~~dl~GK~~nK~aLRkelGL~~~d~d~pLIg~VGRL~~QKGiDlLleA~~~Ll~--~dvqLVIvGdGp~~---- 820 (977)
T PLN02939 747 LKVQYNANDLQGKAANKAALRKQLGLSSADASQPLVGCITRLVPQKGVHLIRHAIYKTAE--LGGQFVLLGSSPVP---- 820 (977)
T ss_pred cccccChhhhhhhhhhhHHHHHHhCCCcccccceEEEEeecCCcccChHHHHHHHHHHhh--cCCEEEEEeCCCcH----
Confidence 11111123345555566778899998432 467999999999999999999999998865 57999999999752
Q ss_pred HHHHHHHHHHHHHHHHcCCCCcEEEccCCCCcCChHHHHHHHHccCcEEEeCCCCCCCcHHHHHHHHcCCcEEEcCcccc
Q 003962 596 LEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGP 675 (783)
Q Consensus 596 ~ee~~~~~~l~~li~~~~L~~~V~flG~~~~~~~~~el~~~ia~aadvfV~PS~~E~fGltvlEAMa~GlPVVat~~GG~ 675 (783)
...+.++.+++++++.++|.|+| ..+......+++ ++|+||+||.+|+||++++|||+||+|+|++++||.
T Consensus 821 ----~~e~eL~~La~~l~l~drV~FlG----~~de~lah~IYA-aADIFLmPSr~EPfGLvqLEAMAyGtPPVVs~vGGL 891 (977)
T PLN02939 821 ----HIQREFEGIADQFQSNNNIRLIL----KYDEALSHSIYA-ASDMFIIPSMFEPCGLTQMIAMRYGSVPIVRKTGGL 891 (977)
T ss_pred ----HHHHHHHHHHHHcCCCCeEEEEe----ccCHHHHHHHHH-hCCEEEECCCccCCcHHHHHHHHCCCCEEEecCCCC
Confidence 33567888999999999999999 555556667888 599999999999999999999999999999999999
Q ss_pred cccccc---------CceEEEECCCCHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHh
Q 003962 676 AEIIVN---------GKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEEKYTWKIYSQRLLTLTGVY 745 (783)
Q Consensus 676 ~EiI~d---------g~~G~li~p~d~e~lAeaI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~~~a~~ll~ly~~~ 745 (783)
.|+|.+ +.+||+++++|+++++++|.+++..+..||+.|++|+++++ .++|||+.++++|+++|...
T Consensus 892 ~DtV~d~d~e~i~~eg~NGfLf~~~D~eaLa~AL~rAL~~~~~dpe~~~~L~~~am---~~dFSWe~~A~qYeeLY~~l 967 (977)
T PLN02939 892 NDSVFDFDDETIPVELRNGFTFLTPDEQGLNSALERAFNYYKRKPEVWKQLVQKDM---NIDFSWDSSASQYEELYQRA 967 (977)
T ss_pred cceeecCCccccccCCCceEEecCCCHHHHHHHHHHHHHHhccCHHHHHHHHHHHH---HhcCCHHHHHHHHHHHHHHH
Confidence 999976 57999999999999999999888666679999999998764 37899999999999998753
No 8
>PRK00654 glgA glycogen synthase; Provisional
Probab=100.00 E-value=2.1e-43 Score=404.53 Aligned_cols=427 Identities=17% Similarity=0.225 Sum_probs=291.9
Q ss_pred ceEEEEcccccccccCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHHCCCceeeceeEEeCCCCCCCCCc-ccceeeee-
Q 003962 255 FNVVILTPHGYFAQDDVLGYPDTGGQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRLLPDAVGTT-CGQRLEKV- 332 (783)
Q Consensus 255 ~rI~iis~h~~~~~~~~lg~p~tGG~~vyv~d~araL~~eLa~~L~~~GheV~~~i~VvT~~~~~~~g~~-~~~~~e~i- 332 (783)
|||+++|.+.+|. ..+||+..++. .|+++|+++||+|. |+|+.++...... .......+
T Consensus 1 m~i~~vs~e~~P~-------~k~GGl~~~v~--------~L~~~L~~~G~~V~----v~~p~y~~~~~~~~~~~~~~~~~ 61 (466)
T PRK00654 1 MKILFVASECAPL-------IKTGGLGDVVG--------ALPKALAALGHDVR----VLLPGYPAIREKLRDAQVVGRLD 61 (466)
T ss_pred CeEEEEEcccccC-------cccCcHHHHHH--------HHHHHHHHCCCcEE----EEecCCcchhhhhcCceEEEEee
Confidence 7999999998854 35899999999 66667799999999 9998865421110 00011111
Q ss_pred --------cCccCeEEEEeccCCCccccccccccccchhh---HHH--HHHHHHHHHHHHcCCCceEEEEcCCCchHHHH
Q 003962 333 --------YGTKYSDILRVPFRTEKGVVRKWISRFEVWPY---LET--YTEDVAVEIAKELQGKPDLIIGNYSDGNIVAS 399 (783)
Q Consensus 333 --------~~~~~v~Ilrvp~~~~~~~~~~~isr~~i~~~---l~~--f~~~~~~~l~~~l~~~pDIIh~h~~~~~lva~ 399 (783)
...+++++++++.... ..+..++.+ ..+ |+..+..++...+..+|||||+|+|.+++++.
T Consensus 62 ~~~~~~~~~~~~gv~v~~v~~~~~-------~~~~~~y~~~d~~~r~~~f~~~~~~~~~~~~~~pDiiH~h~w~~~~~~~ 134 (466)
T PRK00654 62 LFTVLFGHLEGDGVPVYLIDAPHL-------FDRPSGYGYPDNGERFAFFSWAAAEFAEGLDPRPDIVHAHDWHTGLIPA 134 (466)
T ss_pred eEEEEEEeEEcCCceEEEEeCHHH-------cCCCCCCCCcChHHHHHHHHHHHHHHHHhcCCCCceEEECCcHHHHHHH
Confidence 1124677777765221 111122222 122 22333334444455689999999999999998
Q ss_pred HHHHhc-----CCcEEEEecCCCccCCCCC------chhhhhc-cccccccchhhHhHHhhhcCCEEEcCCHHHHhhccc
Q 003962 400 LLAHKL-----GVTQCTIAHALEKTKYPDS------DIYWKNL-DDKYHFSCQFTADLIAMNHTDFIITSTFQEIAGSKD 467 (783)
Q Consensus 400 llar~l-----gvp~v~t~H~l~~~~~~~s------~~~~~~~-~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~~~~~~~ 467 (783)
++++.. ++|+|+|+|++........ ++.+..+ .....+...+...+.+++.||.|+|+|+..++.+.+
T Consensus 135 ~l~~~~~~~~~~~~~v~TiH~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vitvS~~~~~ei~~ 214 (466)
T PRK00654 135 LLKEKYWRGYPDIKTVFTIHNLAYQGLFPAEILGELGLPAEAFHLEGLEFYGQISFLKAGLYYADRVTTVSPTYAREITT 214 (466)
T ss_pred HHHHhhhccCCCCCEEEEcCCCcCCCcCCHHHHHHcCCChHHcCchhhhcCCcccHHHHHHHhcCcCeeeCHHHHHHhcc
Confidence 888663 7999999999854321110 0000000 011111112233456789999999999987765433
Q ss_pred cccccccccccccccceeeeccCCCCCCcEEEecCCccCCCCCCCchHHHhhccCc-hhhHHhhcChhhhhhhhccccCC
Q 003962 468 TVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEEKRRLKSFH-PEIEELLYSDVENKEHLCVLKDR 546 (783)
Q Consensus 468 ~v~qy~~~~~f~~p~l~~v~~gi~~~~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~-~~~~~~l~~~~~~~~~~gll~~~ 546 (783)
....|+ +.+. +.....|+.+|+||+|.+.|.|....... ..+. ..++....++...++++|+. ++
T Consensus 215 ~~~~~g------l~~~------~~~~~~ki~vI~NGid~~~~~p~~~~~~~-~~~~~~~~~~k~~~k~~l~~~~gl~-~~ 280 (466)
T PRK00654 215 PEFGYG------LEGL------LRARSGKLSGILNGIDYDIWNPETDPLLA-ANYSADDLEGKAENKRALQERFGLP-DD 280 (466)
T ss_pred ccCCcC------hHHH------HHhcccCceEecCCCCccccCCccCcccc-cccChhhhhchHHHHHHHHHHhCCC-CC
Confidence 210000 0000 01125689999999999999886432100 0000 11222223344567788883 34
Q ss_pred CCcEEEEEecccCCCCHHHHHHHHHHhHccCCCeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHHcCCCCcEEE-ccCCC
Q 003962 547 NKPILFTMARLDRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLNGQFRW-ISSQM 625 (783)
Q Consensus 547 ~k~iIl~vGRL~~~Kgl~~LieA~~~l~~~~~~~~LvIVG~g~~~~~~~~ee~~~~~~l~~li~~~~L~~~V~f-lG~~~ 625 (783)
+.++|+++||+++.||++.+++|+.++.+. +++|+|+|+|+. ...+++++++++++ +++.+ .|
T Consensus 281 ~~~~i~~vGRl~~~KG~~~li~a~~~l~~~--~~~lvivG~g~~---------~~~~~l~~l~~~~~--~~v~~~~g--- 344 (466)
T PRK00654 281 DAPLFAMVSRLTEQKGLDLVLEALPELLEQ--GGQLVLLGTGDP---------ELEEAFRALAARYP--GKVGVQIG--- 344 (466)
T ss_pred CCcEEEEeeccccccChHHHHHHHHHHHhc--CCEEEEEecCcH---------HHHHHHHHHHHHCC--CcEEEEEe---
Confidence 678999999999999999999999998763 799999999853 24467888888876 45665 45
Q ss_pred CcCChHHHHHHHHccCcEEEeCCCCCCCcHHHHHHHHcCCcEEEcCccccccccccC------ceEEEECCCCHHHHHHH
Q 003962 626 NRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNG------KSGYHIDPYHGEQAAEI 699 (783)
Q Consensus 626 ~~~~~~el~~~ia~aadvfV~PS~~E~fGltvlEAMa~GlPVVat~~GG~~EiI~dg------~~G~li~p~d~e~lAea 699 (783)
. +.+.+..+++ ++|++|+||.+|+||++++|||+||+|+|+|++||+.|+|.++ .+|++++|+|+++++++
T Consensus 345 -~-~~~~~~~~~~-~aDv~v~PS~~E~~gl~~lEAma~G~p~V~~~~gG~~e~v~~~~~~~~~~~G~lv~~~d~~~la~~ 421 (466)
T PRK00654 345 -Y-DEALAHRIYA-GADMFLMPSRFEPCGLTQLYALRYGTLPIVRRTGGLADTVIDYNPEDGEATGFVFDDFNAEDLLRA 421 (466)
T ss_pred -C-CHHHHHHHHh-hCCEEEeCCCCCCchHHHHHHHHCCCCEEEeCCCCccceeecCCCCCCCCceEEeCCCCHHHHHHH
Confidence 2 3344556677 5999999999999999999999999999999999999999988 89999999999999999
Q ss_pred HHHHHHHhhCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Q 003962 700 LVDFFEKCKADPSYWDKISLGGLKRIEEKYTWKIYSQRLLTLTGV 744 (783)
Q Consensus 700 I~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~~~a~~ll~ly~~ 744 (783)
|.++++ +..|++.|++|++++++ ++|||+.++++|+++|+.
T Consensus 422 i~~~l~-~~~~~~~~~~~~~~~~~---~~fsw~~~a~~~~~lY~~ 462 (466)
T PRK00654 422 LRRALE-LYRQPPLWRALQRQAMA---QDFSWDKSAEEYLELYRR 462 (466)
T ss_pred HHHHHH-HhcCHHHHHHHHHHHhc---cCCChHHHHHHHHHHHHH
Confidence 988763 23577889999988863 689999999999999974
No 9
>TIGR03449 mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-inositol-1-phosphate 1-alpha-D-N-acetylglucosaminyltransferase. Members of this protein family, found exclusively in the Actinobacteria, are MshA, the glycosyltransferase of mycothiol biosynthesis. Mycothiol replaces glutathione in these species.
Probab=100.00 E-value=9.7e-43 Score=390.51 Aligned_cols=399 Identities=21% Similarity=0.291 Sum_probs=298.0
Q ss_pred EEEEcccccccccCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHHCCCceeeceeEEeCCCCCCCCCcccceeeeecCcc
Q 003962 257 VVILTPHGYFAQDDVLGYPDTGGQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRLLPDAVGTTCGQRLEKVYGTK 336 (783)
Q Consensus 257 I~iis~h~~~~~~~~lg~p~tGG~~vyv~d~araL~~eLa~~L~~~GheV~~~i~VvT~~~~~~~g~~~~~~~e~i~~~~ 336 (783)
|++++.|+.|. -+.+..+.||.++|+. +|+++|+++||+|+ |+|.......+. .....+
T Consensus 1 ~~~~~~~~~~~--~~~~~~~~GG~e~~v~--------~la~~L~~~G~~V~----v~~~~~~~~~~~-------~~~~~~ 59 (405)
T TIGR03449 1 VAMISMHTSPL--QQPGTGDAGGMNVYIL--------ETATELARRGIEVD----IFTRATRPSQPP-------VVEVAP 59 (405)
T ss_pred CeEEeccCCcc--ccCCCcCCCCceehHH--------HHHHHHhhCCCEEE----EEecccCCCCCC-------ccccCC
Confidence 57888898754 3455667799999999 77777899999999 999764322111 111224
Q ss_pred CeEEEEeccCCCccccccccccccchhhHHHHHHHHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHhcCCcEEEEecCC
Q 003962 337 YSDILRVPFRTEKGVVRKWISRFEVWPYLETYTEDVAVEIAKELQGKPDLIIGNYSDGNIVASLLAHKLGVTQCTIAHAL 416 (783)
Q Consensus 337 ~v~Ilrvp~~~~~~~~~~~isr~~i~~~l~~f~~~~~~~l~~~l~~~pDIIh~h~~~~~lva~llar~lgvp~v~t~H~l 416 (783)
++++.+++..+..+. ....+..++..|.....+.++.....+||+||+|.+.+++.+.++++..++|+|+|.|++
T Consensus 60 ~~~v~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~Diih~h~~~~~~~~~~~~~~~~~p~v~t~h~~ 134 (405)
T TIGR03449 60 GVRVRNVVAGPYEGL-----DKEDLPTQLCAFTGGVLRAEARHEPGYYDLIHSHYWLSGQVGWLLRDRWGVPLVHTAHTL 134 (405)
T ss_pred CcEEEEecCCCcccC-----CHHHHHHHHHHHHHHHHHHHhhccCCCCCeEEechHHHHHHHHHHHHhcCCCEEEeccch
Confidence 688888876543221 111122222334434443444433458999999998788888888888999999999986
Q ss_pred CccCCCCCchhhhhccccccccchhhHhHHhhhcCCEEEcCCHHHHhhccccccccccccccccccceeeeccCCCCCCc
Q 003962 417 EKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPK 496 (783)
Q Consensus 417 ~~~~~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~~~~~~~~v~qy~~~~~f~~p~l~~v~~gi~~~~~k 496 (783)
...+ ..++........ ......+...++.+|.++++|+...+.+.+. .+.+ ..|
T Consensus 135 ~~~~----~~~~~~~~~~~~-~~~~~~e~~~~~~~d~vi~~s~~~~~~~~~~-------------------~~~~--~~k 188 (405)
T TIGR03449 135 AAVK----NAALADGDTPEP-EARRIGEQQLVDNADRLIANTDEEARDLVRH-------------------YDAD--PDR 188 (405)
T ss_pred HHHH----HHhccCCCCCch-HHHHHHHHHHHHhcCeEEECCHHHHHHHHHH-------------------cCCC--hhh
Confidence 4211 001100000000 0112234567899999999998766532221 1222 678
Q ss_pred EEEecCCccCCCCCCCchHHHhhccCchhhHHhhcChhhhhhhhccccCCCCcEEEEEecccCCCCHHHHHHHHHHhHcc
Q 003962 497 FNIVSPGADMSIYFPYTEEKRRLKSFHPEIEELLYSDVENKEHLCVLKDRNKPILFTMARLDRVKNLTGLVEWYGKNAKL 576 (783)
Q Consensus 497 ~~VIpnGvD~~~f~p~~~~~~r~~~~~~~~~~~l~~~~~~~~~~gll~~~~k~iIl~vGRL~~~Kgl~~LieA~~~l~~~ 576 (783)
+.+||||+|.+.|.|..... .++++|+ ++++++|+|+||+.+.||++.+++|+.++.+.
T Consensus 189 i~vi~ngvd~~~~~~~~~~~-------------------~~~~~~~--~~~~~~i~~~G~l~~~K~~~~li~a~~~l~~~ 247 (405)
T TIGR03449 189 IDVVAPGADLERFRPGDRAT-------------------ERARLGL--PLDTKVVAFVGRIQPLKAPDVLLRAVAELLDR 247 (405)
T ss_pred EEEECCCcCHHHcCCCcHHH-------------------HHHhcCC--CCCCcEEEEecCCCcccCHHHHHHHHHHHHhh
Confidence 99999999998887653221 1244665 56788999999999999999999999999877
Q ss_pred CCC--eEEEEEeCCCCCCCccHHHHHHHHHHHHHHHHcCCCCcEEEccCCCCcCChHHHHHHHHccCcEEEeCCCCCCCc
Q 003962 577 REL--VNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFG 654 (783)
Q Consensus 577 ~~~--~~LvIVG~g~~~~~~~~ee~~~~~~l~~li~~~~L~~~V~flG~~~~~~~~~el~~~ia~aadvfV~PS~~E~fG 654 (783)
.++ ++|+|+|++..+. ..+.++++++++++++.++|+|+| .++.+++..+++. +|++|+||..|+||
T Consensus 248 ~~~~~~~l~ivG~~~~~g------~~~~~~l~~~~~~~~l~~~v~~~g----~~~~~~~~~~l~~-ad~~v~ps~~E~~g 316 (405)
T TIGR03449 248 DPDRNLRVIVVGGPSGSG------LATPDALIELAAELGIADRVRFLP----PRPPEELVHVYRA-ADVVAVPSYNESFG 316 (405)
T ss_pred CCCcceEEEEEeCCCCCc------chHHHHHHHHHHHcCCCceEEECC----CCCHHHHHHHHHh-CCEEEECCCCCCcC
Confidence 776 9999999753210 023467888899999999999999 7778999999995 99999999999999
Q ss_pred HHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhCCHHHH
Q 003962 655 LTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEEKYTWKIY 734 (783)
Q Consensus 655 ltvlEAMa~GlPVVat~~GG~~EiI~dg~~G~li~p~d~e~lAeaI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~~~ 734 (783)
++++|||+||+|||+|+.||..|+|.++.+|++++++|+++++++|.+++ +|++.+++|++++++.+ ++|||+.+
T Consensus 317 ~~~lEAma~G~Pvi~~~~~~~~e~i~~~~~g~~~~~~d~~~la~~i~~~l----~~~~~~~~~~~~~~~~~-~~fsw~~~ 391 (405)
T TIGR03449 317 LVAMEAQACGTPVVAARVGGLPVAVADGETGLLVDGHDPADWADALARLL----DDPRTRIRMGAAAVEHA-AGFSWAAT 391 (405)
T ss_pred hHHHHHHHcCCCEEEecCCCcHhhhccCCceEECCCCCHHHHHHHHHHHH----hCHHHHHHHHHHHHHHH-HhCCHHHH
Confidence 99999999999999999999999999999999999999999999997766 79999999999999987 78999999
Q ss_pred HHHHHHHHHH
Q 003962 735 SQRLLTLTGV 744 (783)
Q Consensus 735 a~~ll~ly~~ 744 (783)
+++++++|..
T Consensus 392 ~~~~~~~y~~ 401 (405)
T TIGR03449 392 ADGLLSSYRD 401 (405)
T ss_pred HHHHHHHHHH
Confidence 9999999864
No 10
>TIGR02095 glgA glycogen/starch synthases, ADP-glucose type. This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate.
Probab=100.00 E-value=5.2e-42 Score=393.73 Aligned_cols=435 Identities=16% Similarity=0.193 Sum_probs=297.1
Q ss_pred ceEEEEcccccccccCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHHCCCceeeceeEEeCCCCCCCCCccc-----cee
Q 003962 255 FNVVILTPHGYFAQDDVLGYPDTGGQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRLLPDAVGTTCG-----QRL 329 (783)
Q Consensus 255 ~rI~iis~h~~~~~~~~lg~p~tGG~~vyv~d~araL~~eLa~~L~~~GheV~~~i~VvT~~~~~~~g~~~~-----~~~ 329 (783)
|||+++|...+|. -.+||+..++. .|+++|+++||+|. |+|+.++........ ...
T Consensus 1 m~i~~vs~E~~P~-------~k~GGl~~~v~--------~L~~aL~~~G~~v~----v~~p~y~~~~~~~~~~~~~~~~~ 61 (473)
T TIGR02095 1 MRVLFVAAEMAPF-------AKTGGLADVVG--------ALPKALAALGHDVR----VLLPAYGCIEDEVDDQVKVVELV 61 (473)
T ss_pred CeEEEEEeccccc-------cCcCcHHHHHH--------HHHHHHHHcCCeEE----EEecCCcChhhhhccCeEEEEEE
Confidence 7999999997753 35899999999 66666799999999 999887642211000 000
Q ss_pred e--------e----ecCccCeEEEEeccCCCcccccc-c-cccccchhhHHHH--HHHHHHHHHHHcCCCceEEEEcCCC
Q 003962 330 E--------K----VYGTKYSDILRVPFRTEKGVVRK-W-ISRFEVWPYLETY--TEDVAVEIAKELQGKPDLIIGNYSD 393 (783)
Q Consensus 330 e--------~----i~~~~~v~Ilrvp~~~~~~~~~~-~-isr~~i~~~l~~f--~~~~~~~l~~~l~~~pDIIh~h~~~ 393 (783)
. . ....+++.++++.... ++.. . +...+......+| +..+..++....+.+|||||+|.|.
T Consensus 62 ~~~~~~~~~~~~~~~~~~~~v~~~~i~~~~---~~~r~~~~y~~~~~d~~~r~~~f~~a~~~~~~~~~~~~DiiH~hdw~ 138 (473)
T TIGR02095 62 DLSVGPRTLYVKVFEGVVEGVPVYFIDNPS---LFDRPGGIYGDDYPDNAERFAFFSRAAAELLSGLGWQPDVVHAHDWH 138 (473)
T ss_pred EEeecCceeEEEEEEEEECCceEEEEECHH---HcCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCEEEECCcH
Confidence 0 0 0112356666664321 0000 0 1100000111222 2233334444445789999999999
Q ss_pred chHHHHHHHHhcC---CcEEEEecCCCccCC-CCCchhh-----hhcc-ccccccchhhHhHHhhhcCCEEEcCCHHHHh
Q 003962 394 GNIVASLLAHKLG---VTQCTIAHALEKTKY-PDSDIYW-----KNLD-DKYHFSCQFTADLIAMNHTDFIITSTFQEIA 463 (783)
Q Consensus 394 ~~lva~llar~lg---vp~v~t~H~l~~~~~-~~s~~~~-----~~~~-~~y~f~~~~~~e~~a~~~AD~IIt~S~~~~~ 463 (783)
+++++.++++..+ +|.|+|+|++..... +.....+ ..+. ..+.+...+...+.+++.||.|+|+|+..++
T Consensus 139 ~~~~~~~l~~~~~~~~~~~v~TiH~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~v~tVS~~~~~ 218 (473)
T TIGR02095 139 TALVPALLKAVYRPNPIKTVFTIHNLAYQGVFPADDFSELGLPPEYFHMEGLEFYGRVNFLKGGIVYADRVTTVSPTYAR 218 (473)
T ss_pred HHHHHHHHHhhccCCCCCEEEEcCCCccCCcCCHHHHHHcCCChHHcCchhhhcCCchHHHHHHHHhCCcCeecCHhHHH
Confidence 9999998888776 999999999764322 1111111 0000 1111111233456689999999999998776
Q ss_pred hccccccccccccccccccceeeeccCCCCCCcEEEecCCccCCCCCCCchHHHhhccCchhhHHhhcChhhhhhhhccc
Q 003962 464 GSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEEKRRLKSFHPEIEELLYSDVENKEHLCVL 543 (783)
Q Consensus 464 ~~~~~v~qy~~~~~f~~p~l~~v~~gi~~~~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~~~~~l~~~~~~~~~~gll 543 (783)
.+.+....+ .+.+. +.....++.+|+||+|.+.|.|..+.......-...++....+....++++|+.
T Consensus 219 ei~~~~~~~------~l~~~------l~~~~~ki~~I~NGid~~~~~p~~~~~~~~~~~~~~~~~k~~~k~~l~~~~gl~ 286 (473)
T TIGR02095 219 EILTPEFGY------GLDGV------LKARSGKLRGILNGIDTEVWNPATDPYLKANYSADDLAGKAENKEALQEELGLP 286 (473)
T ss_pred HhcCCcCCc------cchhH------HHhcCCCeEEEeCCCCccccCCCCCcccccCcCccchhhhhhhHHHHHHHcCCC
Confidence 544321000 00000 011256899999999999998864321100000011122222344567888985
Q ss_pred cCCCCcEEEEEecccCCCCHHHHHHHHHHhHccCCCeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHHcCCCCcEEEccC
Q 003962 544 KDRNKPILFTMARLDRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISS 623 (783)
Q Consensus 544 ~~~~k~iIl~vGRL~~~Kgl~~LieA~~~l~~~~~~~~LvIVG~g~~~~~~~~ee~~~~~~l~~li~~~~L~~~V~flG~ 623 (783)
.++++++|+++||+.+.||++.+++|+.++.+. +++|+|+|+|+. ...+++++++++++ +++.+.+
T Consensus 287 ~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~--~~~lvi~G~g~~---------~~~~~l~~~~~~~~--~~v~~~~- 352 (473)
T TIGR02095 287 VDDDVPLFGVISRLTQQKGVDLLLAALPELLEL--GGQLVVLGTGDP---------ELEEALRELAERYP--GNVRVII- 352 (473)
T ss_pred ccCCCCEEEEEecCccccChHHHHHHHHHHHHc--CcEEEEECCCCH---------HHHHHHHHHHHHCC--CcEEEEE-
Confidence 445789999999999999999999999998763 599999999853 23466777777654 6788887
Q ss_pred CCCcCChHHHHHHHHccCcEEEeCCCCCCCcHHHHHHHHcCCcEEEcCccccccccccC------ceEEEECCCCHHHHH
Q 003962 624 QMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNG------KSGYHIDPYHGEQAA 697 (783)
Q Consensus 624 ~~~~~~~~el~~~ia~aadvfV~PS~~E~fGltvlEAMa~GlPVVat~~GG~~EiI~dg------~~G~li~p~d~e~lA 697 (783)
..+.+++..+++. +|++|+||.+|+||++++|||+||+|+|+|++||..|+|.++ .+|++++++|+++++
T Consensus 353 ---~~~~~~~~~~~~~-aDv~l~pS~~E~~gl~~lEAma~G~pvI~s~~gg~~e~v~~~~~~~~~~~G~l~~~~d~~~la 428 (473)
T TIGR02095 353 ---GYDEALAHLIYAG-ADFILMPSRFEPCGLTQLYAMRYGTVPIVRRTGGLADTVVDGDPEAESGTGFLFEEYDPGALL 428 (473)
T ss_pred ---cCCHHHHHHHHHh-CCEEEeCCCcCCcHHHHHHHHHCCCCeEEccCCCccceEecCCCCCCCCceEEeCCCCHHHHH
Confidence 5566677778884 999999999999999999999999999999999999999998 899999999999999
Q ss_pred HHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Q 003962 698 EILVDFFEKCKADPSYWDKISLGGLKRIEEKYTWKIYSQRLLTLTGV 744 (783)
Q Consensus 698 eaI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~~~a~~ll~ly~~ 744 (783)
++|.+++....+|++.|++|++++++ ++|||+.++++|+++|+.
T Consensus 429 ~~i~~~l~~~~~~~~~~~~~~~~~~~---~~fsw~~~a~~~~~~Y~~ 472 (473)
T TIGR02095 429 AALSRALRLYRQDPSLWEALQKNAMS---QDFSWDKSAKQYVELYRS 472 (473)
T ss_pred HHHHHHHHHHhcCHHHHHHHHHHHhc---cCCCcHHHHHHHHHHHHh
Confidence 99988875444599999999998863 689999999999999964
No 11
>PLN02316 synthase/transferase
Probab=100.00 E-value=3.7e-41 Score=403.78 Aligned_cols=408 Identities=14% Similarity=0.082 Sum_probs=284.5
Q ss_pred CcceEEEEcccccccccCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHHCCCceeeceeEEeCCCCCCCCCc-cccee-e
Q 003962 253 MVFNVVILTPHGYFAQDDVLGYPDTGGQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRLLPDAVGTT-CGQRL-E 330 (783)
Q Consensus 253 m~~rI~iis~h~~~~~~~~lg~p~tGG~~vyv~d~araL~~eLa~~L~~~GheV~~~i~VvT~~~~~~~g~~-~~~~~-e 330 (783)
.+|||++||.+..|- ..+||+..++. .|+++|+++||+|. |+|+.++...... ..... .
T Consensus 586 ~pM~Il~VSsE~~P~-------aKvGGLgDVV~--------sLp~ALa~~Gh~V~----VitP~Y~~i~~~~~~~~~~~~ 646 (1036)
T PLN02316 586 PPMHIVHIAVEMAPI-------AKVGGLGDVVT--------SLSRAVQDLNHNVD----IILPKYDCLNLSHVKDLHYQR 646 (1036)
T ss_pred CCcEEEEEEcccCCC-------CCcCcHHHHHH--------HHHHHHHHcCCEEE----EEecCCcccchhhcccceEEE
Confidence 359999999998753 35899999999 66666799999999 9999876311000 00000 0
Q ss_pred ee-----------cCccCeEEEEeccCCCccccccccccccchh---hHHH--HHHHHHHHHHHHcCCCceEEEEcCCCc
Q 003962 331 KV-----------YGTKYSDILRVPFRTEKGVVRKWISRFEVWP---YLET--YTEDVAVEIAKELQGKPDLIIGNYSDG 394 (783)
Q Consensus 331 ~i-----------~~~~~v~Ilrvp~~~~~~~~~~~isr~~i~~---~l~~--f~~~~~~~l~~~l~~~pDIIh~h~~~~ 394 (783)
.+ ...+++.++.+.... +++ .+..++. ..++ |+..+..++......+|||||+|+|.+
T Consensus 647 ~~~~~~~~~~v~~~~~~GV~vyfl~~~~--~~F----~r~~~Yg~~Dd~~RF~~F~~Aale~l~~~~~~PDIIHaHDW~t 720 (1036)
T PLN02316 647 SYSWGGTEIKVWFGKVEGLSVYFLEPQN--GMF----WAGCVYGCRNDGERFGFFCHAALEFLLQSGFHPDIIHCHDWSS 720 (1036)
T ss_pred EeccCCEEEEEEEEEECCcEEEEEeccc--ccc----CCCCCCCchhHHHHHHHHHHHHHHHHHhcCCCCCEEEECCChH
Confidence 00 011244555443211 111 1111111 1222 233333344444456899999999998
Q ss_pred hHHHHHHHHh------cCCcEEEEecCCCccCCCCCchhhhhccccccccchhhHhHHhhhcCCEEEcCCHHHHhhcccc
Q 003962 395 NIVASLLAHK------LGVTQCTIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTFQEIAGSKDT 468 (783)
Q Consensus 395 ~lva~llar~------lgvp~v~t~H~l~~~~~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~~~~~~~~ 468 (783)
++++.++++. .++|+|+|+|++.... + .-..++..||.|+|+|+..+..+...
T Consensus 721 alva~llk~~~~~~~~~~~p~V~TiHnl~~~~---------------n------~lk~~l~~AD~ViTVS~tya~EI~~~ 779 (1036)
T PLN02316 721 APVAWLFKDHYAHYGLSKARVVFTIHNLEFGA---------------N------HIGKAMAYADKATTVSPTYSREVSGN 779 (1036)
T ss_pred HHHHHHHHHhhhhhccCCCCEEEEeCCcccch---------------h------HHHHHHHHCCEEEeCCHHHHHHHHhc
Confidence 8988888774 3589999999864211 0 01246789999999999877643321
Q ss_pred ccccccccccccccceeeeccCCCCCCcEEEecCCccCCCCCCCchHHHhhccCc-hhhHHhhcChhhhhhhhccccCCC
Q 003962 469 VGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEEKRRLKSFH-PEIEELLYSDVENKEHLCVLKDRN 547 (783)
Q Consensus 469 v~qy~~~~~f~~p~l~~v~~gi~~~~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~-~~~~~~l~~~~~~~~~~gll~~~~ 547 (783)
+ .+.....|+.+|+||||.+.|.|.++.......-. ..++....+....++.+|+. +.+
T Consensus 780 ---~----------------~l~~~~~Kl~vI~NGID~~~w~P~tD~~lp~~y~~~~~~~gK~~~k~~Lr~~lGL~-~~d 839 (1036)
T PLN02316 780 ---S----------------AIAPHLYKFHGILNGIDPDIWDPYNDNFIPVPYTSENVVEGKRAAKEALQQRLGLK-QAD 839 (1036)
T ss_pred ---c----------------CcccccCCEEEEECCccccccCCcccccccccCCchhhhhhhhhhHHHHHHHhCCC-ccc
Confidence 0 12212468999999999999988643211000000 00111222334567788983 246
Q ss_pred CcEEEEEecccCCCCHHHHHHHHHHhHccCCCeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHHcCC--CCcEEEccCCC
Q 003962 548 KPILFTMARLDRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKL--NGQFRWISSQM 625 (783)
Q Consensus 548 k~iIl~vGRL~~~Kgl~~LieA~~~l~~~~~~~~LvIVG~g~~~~~~~~ee~~~~~~l~~li~~~~L--~~~V~flG~~~ 625 (783)
.|+|+++|||.++||++.|++|+.++.+ .+++|+|+|+|++. .....++++++++++ +++|.|.|.
T Consensus 840 ~plVg~VGRL~~qKGvdlLi~Al~~ll~--~~~qlVIvG~Gpd~--------~~e~~l~~La~~Lg~~~~~rV~f~g~-- 907 (1036)
T PLN02316 840 LPLVGIITRLTHQKGIHLIKHAIWRTLE--RNGQVVLLGSAPDP--------RIQNDFVNLANQLHSSHHDRARLCLT-- 907 (1036)
T ss_pred CeEEEEEeccccccCHHHHHHHHHHHhh--cCcEEEEEeCCCCH--------HHHHHHHHHHHHhCccCCCeEEEEec--
Confidence 7999999999999999999999999865 47999999999752 345678888988865 578999883
Q ss_pred CcCChHHHHHHHHccCcEEEeCCCCCCCcHHHHHHHHcCCcEEEcCccccccccccC-------------ceEEEECCCC
Q 003962 626 NRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNG-------------KSGYHIDPYH 692 (783)
Q Consensus 626 ~~~~~~el~~~ia~aadvfV~PS~~E~fGltvlEAMa~GlPVVat~~GG~~EiI~dg-------------~~G~li~p~d 692 (783)
.+......+++ ++|+||+||++|+||++++|||+||+|+|++++||++|+|.++ .+||++++.|
T Consensus 908 --~de~lah~iya-aADiflmPS~~EP~GLvqLEAMa~GtppVvs~vGGL~DtV~d~d~~~~~~~~~g~~~tGflf~~~d 984 (1036)
T PLN02316 908 --YDEPLSHLIYA-GADFILVPSIFEPCGLTQLTAMRYGSIPVVRKTGGLFDTVFDVDHDKERAQAQGLEPNGFSFDGAD 984 (1036)
T ss_pred --CCHHHHHHHHH-hCcEEEeCCcccCccHHHHHHHHcCCCeEEEcCCCcHhhccccccccccccccccCCceEEeCCCC
Confidence 32222236677 5999999999999999999999999999999999999999884 6899999999
Q ss_pred HHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Q 003962 693 GEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEEKYTWKIYSQRLLTLTGV 744 (783)
Q Consensus 693 ~e~lAeaI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~~~a~~ll~ly~~ 744 (783)
+++++.+|.+++... ++....+++.+++.+.+.|||+.++++|+++|+.
T Consensus 985 ~~aLa~AL~raL~~~---~~~~~~~~~~~r~~m~~dFSW~~~A~~Y~~LY~~ 1033 (1036)
T PLN02316 985 AAGVDYALNRAISAW---YDGRDWFNSLCKRVMEQDWSWNRPALDYMELYHS 1033 (1036)
T ss_pred HHHHHHHHHHHHhhh---hhhHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHH
Confidence 999999998887422 3444556777777778899999999999999964
No 12
>cd03800 GT1_Sucrose_synthase This family is most closely related to the GT1 family of glycosyltransferases. The sucrose-phosphate synthases in this family may be unique to plants and photosynthetic bacteria. This enzyme catalyzes the synthesis of sucrose 6-phosphate from fructose 6-phosphate and uridine 5'-diphosphate-glucose, a key regulatory step of sucrose metabolism. The activity of this enzyme is regulated by phosphorylation and moderated by the concentration of various metabolites and light.
Probab=100.00 E-value=6.6e-41 Score=371.85 Aligned_cols=397 Identities=33% Similarity=0.552 Sum_probs=301.4
Q ss_pred eEEEEcccccccccCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHHCCCceeeceeEEeCCCCCCCCCcccceeeeecCc
Q 003962 256 NVVILTPHGYFAQDDVLGYPDTGGQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRLLPDAVGTTCGQRLEKVYGT 335 (783)
Q Consensus 256 rI~iis~h~~~~~~~~lg~p~tGG~~vyv~d~araL~~eLa~~L~~~GheV~~~i~VvT~~~~~~~g~~~~~~~e~i~~~ 335 (783)
||+|++.|+.+.. ..|.|+.||.+.++. +|++.|+++||+|+ |+|...+..... .....
T Consensus 1 ~~~~~~~~~~~~~--~~~~~~~GG~~~~~~--------~l~~~L~~~g~~V~----v~~~~~~~~~~~-------~~~~~ 59 (398)
T cd03800 1 RIALISLHGSPLA--QPGGADTGGQNVYVL--------ELARALARLGHEVD----IFTRRIDDALPP-------IVELA 59 (398)
T ss_pred CeEEEeccccccc--cCCCCCCCceeehHH--------HHHHHHhccCceEE----EEEecCCcccCC-------ccccc
Confidence 5889999976532 245689999999999 66667789999999 998654332111 01122
Q ss_pred cCeEEEEeccCCCccccccccccccchhhHHHHHHHHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHhcCCcEEEEecC
Q 003962 336 KYSDILRVPFRTEKGVVRKWISRFEVWPYLETYTEDVAVEIAKELQGKPDLIIGNYSDGNIVASLLAHKLGVTQCTIAHA 415 (783)
Q Consensus 336 ~~v~Ilrvp~~~~~~~~~~~isr~~i~~~l~~f~~~~~~~l~~~l~~~pDIIh~h~~~~~lva~llar~lgvp~v~t~H~ 415 (783)
.++.+.+++..+.. ..++...++++..|...+...+.... .+||+||+|++..+.++..+++..++|+|++.|+
T Consensus 60 ~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~Div~~~~~~~~~~~~~~~~~~~~~~i~~~h~ 133 (398)
T cd03800 60 PGVRVVRVPAGPAE-----YLPKEELWPYLDEFADDLLRFLRREG-GRPDLIHAHYWDSGLVALLLARRLGIPLVHTFHS 133 (398)
T ss_pred cceEEEeccccccc-----CCChhhcchhHHHHHHHHHHHHHhcC-CCccEEEEecCccchHHHHHHhhcCCceEEEeec
Confidence 36778887765421 12233456666666666655554432 3899999999888888888999999999999998
Q ss_pred CCccCCCCCchhhhhccccccccchhhHhHHhhhcCCEEEcCCHHHHhhccccccccccccccccccceeeeccCCCCCC
Q 003962 416 LEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDP 495 (783)
Q Consensus 416 l~~~~~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~~~~~~~~v~qy~~~~~f~~p~l~~v~~gi~~~~~ 495 (783)
+...........|. +........+...++.+|.++++|......+.+.. +. ...
T Consensus 134 ~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~ad~ii~~s~~~~~~~~~~~-------------------~~--~~~ 187 (398)
T cd03800 134 LGAVKRRHLGAADT-----YEPARRIEAEERLLRAADRVIASTPQEAEELYSLY-------------------GA--YPR 187 (398)
T ss_pred ccccCCcccccccc-----cchhhhhhHHHHHHhhCCEEEEcCHHHHHHHHHHc-------------------cc--ccc
Confidence 75433222111111 11122234466788999999999987765332221 11 144
Q ss_pred cEEEecCCccCCCCCCCchHHHhhccCchhhHHhhcChhhhhhhhccccCCCCcEEEEEecccCCCCHHHHHHHHHHhHc
Q 003962 496 KFNIVSPGADMSIYFPYTEEKRRLKSFHPEIEELLYSDVENKEHLCVLKDRNKPILFTMARLDRVKNLTGLVEWYGKNAK 575 (783)
Q Consensus 496 k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~~~~~l~~~~~~~~~~gll~~~~k~iIl~vGRL~~~Kgl~~LieA~~~l~~ 575 (783)
++.+||||+|.+.|.+....... ++.++. ..++++|+|+||+++.||++.+++++..+.+
T Consensus 188 ~~~vi~ng~~~~~~~~~~~~~~~------------------~~~~~~--~~~~~~i~~~gr~~~~k~~~~ll~a~~~l~~ 247 (398)
T cd03800 188 RIRVVPPGVDLERFTPYGRAEAR------------------RARLLR--DPDKPRILAVGRLDPRKGIDTLIRAYAELPE 247 (398)
T ss_pred ccEEECCCCCccceecccchhhH------------------HHhhcc--CCCCcEEEEEcccccccCHHHHHHHHHHHHH
Confidence 68999999999887665432210 122333 4567899999999999999999999999988
Q ss_pred cCCCeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHHcCCCCcEEEccCCCCcCChHHHHHHHHccCcEEEeCCCCCCCcH
Q 003962 576 LRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGL 655 (783)
Q Consensus 576 ~~~~~~LvIVG~g~~~~~~~~ee~~~~~~l~~li~~~~L~~~V~flG~~~~~~~~~el~~~ia~aadvfV~PS~~E~fGl 655 (783)
..++++|+++|++..... ......++.+++++++.++|.|+| .++.+++..+++. +|++++||..|+||+
T Consensus 248 ~~~~~~l~i~G~~~~~~~-----~~~~~~~~~~~~~~~~~~~v~~~g----~~~~~~~~~~~~~-adi~l~ps~~e~~~~ 317 (398)
T cd03800 248 LRERANLVIVGGPRDDIL-----AMDEEELRELARELGVIDRVDFPG----RVSREDLPALYRA-ADVFVNPALYEPFGL 317 (398)
T ss_pred hCCCeEEEEEECCCCcch-----hhhhHHHHHHHHhcCCCceEEEec----cCCHHHHHHHHHh-CCEEEecccccccCc
Confidence 888999999999875211 112244677888899999999999 7788999999996 999999999999999
Q ss_pred HHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhCCHHHHH
Q 003962 656 TVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEEKYTWKIYS 735 (783)
Q Consensus 656 tvlEAMa~GlPVVat~~GG~~EiI~dg~~G~li~p~d~e~lAeaI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~~~a 735 (783)
+++|||+||+|||+|+.||..|+|+++++|++++++|+++++++|.+++ +|++.+++|++++++.+.++|||+.++
T Consensus 318 ~l~Ea~a~G~Pvi~s~~~~~~e~i~~~~~g~~~~~~~~~~l~~~i~~l~----~~~~~~~~~~~~a~~~~~~~~s~~~~~ 393 (398)
T cd03800 318 TALEAMACGLPVVATAVGGPRDIVVDGVTGLLVDPRDPEALAAALRRLL----TDPALRRRLSRAGLRRARARYTWERVA 393 (398)
T ss_pred HHHHHHhcCCCEEECCCCCHHHHccCCCCeEEeCCCCHHHHHHHHHHHH----hCHHHHHHHHHHHHHHHHHhCCHHHHH
Confidence 9999999999999999999999999999999999999999999997665 899999999999999999999999999
Q ss_pred HHHH
Q 003962 736 QRLL 739 (783)
Q Consensus 736 ~~ll 739 (783)
++++
T Consensus 394 ~~~~ 397 (398)
T cd03800 394 ARLL 397 (398)
T ss_pred HHHh
Confidence 9986
No 13
>PRK14098 glycogen synthase; Provisional
Probab=100.00 E-value=8.6e-41 Score=384.04 Aligned_cols=440 Identities=16% Similarity=0.175 Sum_probs=298.5
Q ss_pred CCcceEEEEcccccccccCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHHCCCceeeceeEEeCCCCCCCCCc--ccc--
Q 003962 252 PMVFNVVILTPHGYFAQDDVLGYPDTGGQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRLLPDAVGTT--CGQ-- 327 (783)
Q Consensus 252 pm~~rI~iis~h~~~~~~~~lg~p~tGG~~vyv~d~araL~~eLa~~L~~~GheV~~~i~VvT~~~~~~~g~~--~~~-- 327 (783)
|| |||+++|.--.|- ..|||..-++- .|.++|+++||+|. |+++.+..-.... ...
T Consensus 4 ~~-~~il~v~~E~~p~-------~k~Ggl~dv~~--------~Lp~al~~~g~~v~----v~~P~y~~~~~~~~~~~~~~ 63 (489)
T PRK14098 4 RN-FKVLYVSGEVSPF-------VRVSALADFMA--------SFPQALEEEGFEAR----IMMPKYGTINDRKFRLHDVL 63 (489)
T ss_pred CC-cEEEEEeecchhh-------cccchHHHHHH--------HHHHHHHHCCCeEE----EEcCCCCchhhhhhccccce
Confidence 66 9999999877643 57999998888 56666799999999 9998875432110 000
Q ss_pred eeeeec--CccCeEEEEec--cCCCcc---c-cc--cccccccch----------hhHHHH--HHHHHHHHHHHcCCCce
Q 003962 328 RLEKVY--GTKYSDILRVP--FRTEKG---V-VR--KWISRFEVW----------PYLETY--TEDVAVEIAKELQGKPD 385 (783)
Q Consensus 328 ~~e~i~--~~~~v~Ilrvp--~~~~~~---~-~~--~~isr~~i~----------~~l~~f--~~~~~~~l~~~l~~~pD 385 (783)
....+. -.....+.++- ..+..+ + +. .+..|..++ .-.++| +..+..++......+||
T Consensus 64 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~f~r~~~y~~~~~g~~~~d~~~rf~~f~~a~l~~~~~~~~~pD 143 (489)
T PRK14098 64 RLSDIEVPLKEKTDLLHVKVTALPSSKIQTYFLYNEKYFKRNGLFTDMSLGGDLKGSAEKVIFFNVGVLETLQRLGWKPD 143 (489)
T ss_pred EEEEEEEeecCeeEEEEEEEecccCCCceEEEEeCHHHcCCCCcCCCCccCCCCCcHHHHHHHHHHHHHHHHHhcCCCCC
Confidence 111110 00011222110 000000 0 00 001111111 112233 22333344444456899
Q ss_pred EEEEcCCCchHHHHHHHHhc-------CCcEEEEecCCCccCCCCCchh-----hhhccccccccchhhHhHHhhhcCCE
Q 003962 386 LIIGNYSDGNIVASLLAHKL-------GVTQCTIAHALEKTKYPDSDIY-----WKNLDDKYHFSCQFTADLIAMNHTDF 453 (783)
Q Consensus 386 IIh~h~~~~~lva~llar~l-------gvp~v~t~H~l~~~~~~~s~~~-----~~~~~~~y~f~~~~~~e~~a~~~AD~ 453 (783)
|||+|.|.+++++.++++.. ++|.|+|+|++........... +........+...+...+.+++.||.
T Consensus 144 iiH~hdw~t~l~~~~l~~~~~~~~~~~~~~~V~TiHn~~~qg~~~~~~~~~~~~~~~~~~~~~~~~~~n~lk~~i~~ad~ 223 (489)
T PRK14098 144 IIHCHDWYAGLVPLLLKTVYADHEFFKDIKTVLTIHNVYRQGVLPFKVFQKLLPEEVCSGLHREGDEVNMLYTGVEHADL 223 (489)
T ss_pred EEEecCcHHHHHHHHHHHHhhhccccCCCCEEEEcCCCcccCCCCHHHHHHhCCHHhhhhhhhcCCcccHHHHHHHhcCc
Confidence 99999999999998887654 7999999999754332111100 00000000111123345668899999
Q ss_pred EEcCCHHHHhhccccccccccccccccccceeeeccCCCCCCcEEEecCCccCCCCCCCchHHHhhccCchhhHHhhcCh
Q 003962 454 IITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEEKRRLKSFHPEIEELLYSD 533 (783)
Q Consensus 454 IIt~S~~~~~~~~~~v~qy~~~~~f~~p~l~~v~~gi~~~~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~~~~~l~~~ 533 (783)
|+|+|+..++.+.+.. .+ .+.+++..+ ....|+.+|+||+|.+.|.|..+...+...-...++...-++
T Consensus 224 VitVS~~~a~ei~~~~-~~----~~gl~~~l~------~~~~kl~~I~NGID~~~~~p~~d~~~~~~~~~~~~~~k~~~k 292 (489)
T PRK14098 224 LTTTSPRYAEEIAGDG-EE----AFGLDKVLE------ERKMRLHGILNGIDTRQWNPSTDKLIKKRYSIERLDGKLENK 292 (489)
T ss_pred ceeeCHHHHHHhCcCC-CC----CcChHHHHH------hcCCCeeEEeCCccccccCCcccccccccCCcchhhhHHHHH
Confidence 9999998887554310 00 011111111 115789999999999999987543211111012233334445
Q ss_pred hhhhhhhccccCCCCcEEEEEecccCCCCHHHHHHHHHHhHccCCCeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHHcC
Q 003962 534 VENKEHLCVLKDRNKPILFTMARLDRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYK 613 (783)
Q Consensus 534 ~~~~~~~gll~~~~k~iIl~vGRL~~~Kgl~~LieA~~~l~~~~~~~~LvIVG~g~~~~~~~~ee~~~~~~l~~li~~~~ 613 (783)
...++.+|+..+++.++|+++||+.+.||++.|++|+.++.+ ++++|+|+|+|+. .+.+.+++++++++
T Consensus 293 ~~l~~~lgl~~~~~~~~i~~vgRl~~~KG~d~li~a~~~l~~--~~~~lvivG~G~~---------~~~~~l~~l~~~~~ 361 (489)
T PRK14098 293 KALLEEVGLPFDEETPLVGVIINFDDFQGAELLAESLEKLVE--LDIQLVICGSGDK---------EYEKRFQDFAEEHP 361 (489)
T ss_pred HHHHHHhCCCCccCCCEEEEeccccccCcHHHHHHHHHHHHh--cCcEEEEEeCCCH---------HHHHHHHHHHHHCC
Confidence 667788899766788999999999999999999999999875 4799999999853 24567888888764
Q ss_pred CCCcEEEccCCCCcCChHHHHHHHHccCcEEEeCCCCCCCcHHHHHHHHcCCcEEEcCcccccccccc----CceEEEEC
Q 003962 614 LNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVN----GKSGYHID 689 (783)
Q Consensus 614 L~~~V~flG~~~~~~~~~el~~~ia~aadvfV~PS~~E~fGltvlEAMa~GlPVVat~~GG~~EiI~d----g~~G~li~ 689 (783)
++|.|+| .++.+++..+++. +|+||+||.+|+||++.+|||+||+|+|++++||..|.|.+ +.+|++++
T Consensus 362 --~~V~~~g----~~~~~~~~~~~a~-aDi~l~PS~~E~~Gl~~lEAma~G~ppVv~~~GGl~d~v~~~~~~~~~G~l~~ 434 (489)
T PRK14098 362 --EQVSVQT----EFTDAFFHLAIAG-LDMLLMPGKIESCGMLQMFAMSYGTIPVAYAGGGIVETIEEVSEDKGSGFIFH 434 (489)
T ss_pred --CCEEEEE----ecCHHHHHHHHHh-CCEEEeCCCCCCchHHHHHHHhCCCCeEEecCCCCceeeecCCCCCCceeEeC
Confidence 7899999 6677788888885 99999999999999999999999999999999999998864 67999999
Q ss_pred CCCHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Q 003962 690 PYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEEKYTWKIYSQRLLTLTGV 744 (783)
Q Consensus 690 p~d~e~lAeaI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~~~a~~ll~ly~~ 744 (783)
++|+++++++|.++++ +..|++.|+++++++. .++|||+.++++|+++|+.
T Consensus 435 ~~d~~~la~ai~~~l~-~~~~~~~~~~~~~~~~---~~~fsw~~~a~~y~~lY~~ 485 (489)
T PRK14098 435 DYTPEALVAKLGEALA-LYHDEERWEELVLEAM---ERDFSWKNSAEEYAQLYRE 485 (489)
T ss_pred CCCHHHHHHHHHHHHH-HHcCHHHHHHHHHHHh---cCCCChHHHHHHHHHHHHH
Confidence 9999999999988763 5578999999988764 4789999999999999964
No 14
>PRK10307 putative glycosyl transferase; Provisional
Probab=100.00 E-value=2.5e-40 Score=372.64 Aligned_cols=396 Identities=12% Similarity=0.095 Sum_probs=285.2
Q ss_pred ceEEEEcccccccccCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHHCCCceeeceeEEeCCCCCCCCC---cccceeee
Q 003962 255 FNVVILTPHGYFAQDDVLGYPDTGGQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRLLPDAVGT---TCGQRLEK 331 (783)
Q Consensus 255 ~rI~iis~h~~~~~~~~lg~p~tGG~~vyv~d~araL~~eLa~~L~~~GheV~~~i~VvT~~~~~~~g~---~~~~~~e~ 331 (783)
|||++++.+++ |+.||.+.++. +|+++|.++||+|+ |+|+....+.+. ........
T Consensus 1 mkIlii~~~~~---------P~~~g~~~~~~--------~l~~~L~~~G~~V~----vit~~~~~~~~~~~~~~~~~~~~ 59 (412)
T PRK10307 1 MKILVYGINYA---------PELTGIGKYTG--------EMAEWLAARGHEVR----VITAPPYYPQWRVGEGYSAWRYR 59 (412)
T ss_pred CeEEEEecCCC---------CCccchhhhHH--------HHHHHHHHCCCeEE----EEecCCCCCCCCCCcccccccce
Confidence 79999998876 55789999998 67777899999999 999752111110 00100011
Q ss_pred ecCccCeEEEEeccCCCccccccccccccchhhHHHHHHHHHHHHHHHcCCCceEEEEcCCCc--hHHHHHHHHhcCCcE
Q 003962 332 VYGTKYSDILRVPFRTEKGVVRKWISRFEVWPYLETYTEDVAVEIAKELQGKPDLIIGNYSDG--NIVASLLAHKLGVTQ 409 (783)
Q Consensus 332 i~~~~~v~Ilrvp~~~~~~~~~~~isr~~i~~~l~~f~~~~~~~l~~~l~~~pDIIh~h~~~~--~lva~llar~lgvp~ 409 (783)
....++++++|+|...... ...+. .+.. ...|.......+.+....+||+||+|.+.. ...+.+++++.++|+
T Consensus 60 ~~~~~~i~v~r~~~~~~~~--~~~~~--~~~~-~~~~~~~~~~~~~~~~~~~~Div~~~~p~~~~~~~~~~~~~~~~~~~ 134 (412)
T PRK10307 60 RESEGGVTVWRCPLYVPKQ--PSGLK--RLLH-LGSFALSSFFPLLAQRRWRPDRVIGVVPTLFCAPGARLLARLSGART 134 (412)
T ss_pred eeecCCeEEEEccccCCCC--ccHHH--HHHH-HHHHHHHHHHHHhhccCCCCCEEEEeCCcHHHHHHHHHHHHhhCCCE
Confidence 1123578999988642210 00010 1111 122333334444433336899999988654 456777888899999
Q ss_pred EEEecCCCccCCCCCchhhhhccccccccchhhHhHHhhhcCCEEEcCCHHHHhhccccccccccccccccccceeeecc
Q 003962 410 CTIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHG 489 (783)
Q Consensus 410 v~t~H~l~~~~~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~~~~~~~~v~qy~~~~~f~~p~l~~v~~g 489 (783)
++++|+.+..... .................+..+++.+|.|+++|+...+.+++ .+
T Consensus 135 v~~~~d~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~S~~~~~~~~~--------------------~~ 190 (412)
T PRK10307 135 WLHIQDYEVDAAF----GLGLLKGGKVARLATAFERSLLRRFDNVSTISRSMMNKARE--------------------KG 190 (412)
T ss_pred EEEeccCCHHHHH----HhCCccCcHHHHHHHHHHHHHHhhCCEEEecCHHHHHHHHH--------------------cC
Confidence 9999986432100 00000000000001124667889999999999988764322 13
Q ss_pred CCCCCCcEEEecCCccCCCCCCCchHHHhhccCchhhHHhhcChhhhhhhhccccCCCCcEEEEEecccCCCCHHHHHHH
Q 003962 490 IDVFDPKFNIVSPGADMSIYFPYTEEKRRLKSFHPEIEELLYSDVENKEHLCVLKDRNKPILFTMARLDRVKNLTGLVEW 569 (783)
Q Consensus 490 i~~~~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~~~~~l~~~~~~~~~~gll~~~~k~iIl~vGRL~~~Kgl~~LieA 569 (783)
++ ..++.+||||+|.+.|.|...... ...++.+|+ ++++++|+|+||+.+.||++.|++|
T Consensus 191 ~~--~~~i~vi~ngvd~~~~~~~~~~~~----------------~~~~~~~~~--~~~~~~i~~~G~l~~~kg~~~li~a 250 (412)
T PRK10307 191 VA--AEKVIFFPNWSEVARFQPVADADV----------------DALRAQLGL--PDGKKIVLYSGNIGEKQGLELVIDA 250 (412)
T ss_pred CC--cccEEEECCCcCHhhcCCCCccch----------------HHHHHHcCC--CCCCEEEEEcCccccccCHHHHHHH
Confidence 33 678999999999988876532110 012345666 5677899999999999999999999
Q ss_pred HHHhHccCCCeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHHcCCCCcEEEccCCCCcCChHHHHHHHHccCcEEEeCCC
Q 003962 570 YGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPAL 649 (783)
Q Consensus 570 ~~~l~~~~~~~~LvIVG~g~~~~~~~~ee~~~~~~l~~li~~~~L~~~V~flG~~~~~~~~~el~~~ia~aadvfV~PS~ 649 (783)
+.++.+ .++++|+|+|+|+. .++++++++++++. +|+|+| .++.+++..+++. +|++|+||.
T Consensus 251 ~~~l~~-~~~~~l~ivG~g~~-----------~~~l~~~~~~~~l~-~v~f~G----~~~~~~~~~~~~~-aDi~v~ps~ 312 (412)
T PRK10307 251 ARRLRD-RPDLIFVICGQGGG-----------KARLEKMAQCRGLP-NVHFLP----LQPYDRLPALLKM-ADCHLLPQK 312 (412)
T ss_pred HHHhcc-CCCeEEEEECCChh-----------HHHHHHHHHHcCCC-ceEEeC----CCCHHHHHHHHHh-cCEeEEeec
Confidence 998854 57899999999964 36788889999986 799999 6778899999995 999999999
Q ss_pred CCC----CcHHHHHHHHcCCcEEEcCccc--cccccccCceEEEECCCCHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHH
Q 003962 650 YEA----FGLTVVEAMTCGLPTFATCKGG--PAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLK 723 (783)
Q Consensus 650 ~E~----fGltvlEAMa~GlPVVat~~GG--~~EiI~dg~~G~li~p~d~e~lAeaI~~~l~~l~~dp~~~~~ms~~a~~ 723 (783)
.|+ +|.+++|||+||+|||+|+.|| ..|++. .+|++++++|++++|++|.+++ +|++.+++|+++|++
T Consensus 313 ~e~~~~~~p~kl~eama~G~PVi~s~~~g~~~~~~i~--~~G~~~~~~d~~~la~~i~~l~----~~~~~~~~~~~~a~~ 386 (412)
T PRK10307 313 AGAADLVLPSKLTNMLASGRNVVATAEPGTELGQLVE--GIGVCVEPESVEALVAAIAALA----RQALLRPKLGTVARE 386 (412)
T ss_pred cCcccccCcHHHHHHHHcCCCEEEEeCCCchHHHHHh--CCcEEeCCCCHHHHHHHHHHHH----hCHHHHHHHHHHHHH
Confidence 998 5777999999999999998877 458886 5999999999999999997665 899999999999999
Q ss_pred HHHHhCCHHHHHHHHHHHHHH
Q 003962 724 RIEEKYTWKIYSQRLLTLTGV 744 (783)
Q Consensus 724 ~v~~~ysw~~~a~~ll~ly~~ 744 (783)
.++++|||+.++++++++|+.
T Consensus 387 ~~~~~fs~~~~~~~~~~~~~~ 407 (412)
T PRK10307 387 YAERTLDKENVLRQFIADIRG 407 (412)
T ss_pred HHHHHcCHHHHHHHHHHHHHH
Confidence 999999999999999999874
No 15
>cd03791 GT1_Glycogen_synthase_DULL1_like This family is most closely related to the GT1 family of glycosyltransferases. Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms.
Probab=100.00 E-value=4.5e-40 Score=377.41 Aligned_cols=432 Identities=17% Similarity=0.169 Sum_probs=295.4
Q ss_pred eEEEEcccccccccCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHHCCCceeeceeEEeCCCCCCCCC--cccceee---
Q 003962 256 NVVILTPHGYFAQDDVLGYPDTGGQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRLLPDAVGT--TCGQRLE--- 330 (783)
Q Consensus 256 rI~iis~h~~~~~~~~lg~p~tGG~~vyv~d~araL~~eLa~~L~~~GheV~~~i~VvT~~~~~~~g~--~~~~~~e--- 330 (783)
||+++|+-.+|- ..+||...++. .|+++|+++||+|+ |+|+.++..... .......
T Consensus 1 ~Il~v~~E~~p~-------~k~GGl~~~~~--------~L~~aL~~~G~~V~----Vi~p~y~~~~~~~~~~~~~~~~~~ 61 (476)
T cd03791 1 KVLFVASEVAPF-------AKTGGLGDVVG--------ALPKALAKLGHDVR----VIMPKYGRILDELRGQLLVLRLFG 61 (476)
T ss_pred CEEEEEcccccc-------ccCCcHHHHHH--------HHHHHHHHCCCeEE----EEecCCcchhhHhccCeEEEEEEe
Confidence 689999887643 36899999999 66666799999999 999876643211 0000000
Q ss_pred ------------eecCccCeEEEEeccCCCcccccccc--ccccchh-hHH---HHHHHHHHHHHHHcCCCceEEEEcCC
Q 003962 331 ------------KVYGTKYSDILRVPFRTEKGVVRKWI--SRFEVWP-YLE---TYTEDVAVEIAKELQGKPDLIIGNYS 392 (783)
Q Consensus 331 ------------~i~~~~~v~Ilrvp~~~~~~~~~~~i--sr~~i~~-~l~---~f~~~~~~~l~~~l~~~pDIIh~h~~ 392 (783)
.....+++.+++++...... +.++ +....|. ... .|...+. +++..+..+|||||+|.|
T Consensus 62 ~~~~~~~~~~~~~~~~~~gv~~~~l~~~~~~~--~~~~~~~~~~~~~~~~~~~~~f~~~~~-~~l~~~~~~pDviH~hd~ 138 (476)
T cd03791 62 VPVGGRPEYVGVFELPVDGVPVYFLDNPDYFD--RPGLYDDSGYDYEDNAERFALFSRAAL-ELLRRLGWKPDIIHCHDW 138 (476)
T ss_pred eccCCceeEEEEEEEEeCCceEEEEcChHHcC--CCCCCCccCCCCccHHHHHHHHHHHHH-HHHHhcCCCCcEEEECch
Confidence 00112356666664422110 0000 0001111 112 2222333 344444578999999999
Q ss_pred CchHHHHHHHHhc------CCcEEEEecCCCccCCCCCch------hh--hhccccccccchhhHhHHhhhcCCEEEcCC
Q 003962 393 DGNIVASLLAHKL------GVTQCTIAHALEKTKYPDSDI------YW--KNLDDKYHFSCQFTADLIAMNHTDFIITST 458 (783)
Q Consensus 393 ~~~lva~llar~l------gvp~v~t~H~l~~~~~~~s~~------~~--~~~~~~y~f~~~~~~e~~a~~~AD~IIt~S 458 (783)
.+++++.++++.. ++|+|+|+|++.......... .| ......+.+...+..++.++..||.|+++|
T Consensus 139 ~t~~~~~~l~~~~~~~~~~~~~~v~tiH~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~v~~vS 218 (476)
T cd03791 139 HTGLVPALLKEKYADPFFKNIKTVFTIHNLAYQGVFPLEALEDLGLPWEELFHIDGLEFYGQVNFLKAGIVYADAVTTVS 218 (476)
T ss_pred HHHHHHHHHHHhhccccCCCCCEEEEeCCCCCCCCCCHHHHHHcCCCccchhhhcccccCCcccHHHHHHHhcCcCeecC
Confidence 9888888887764 899999999986543211110 00 000111122334456778899999999999
Q ss_pred HHHHhhccccccccccccccccccceeeeccCCCCCCcEEEecCCccCCCCCCCchHHHhhccCchhhHHhhcChhhhhh
Q 003962 459 FQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEEKRRLKSFHPEIEELLYSDVENKE 538 (783)
Q Consensus 459 ~~~~~~~~~~v~qy~~~~~f~~p~l~~v~~gi~~~~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~~~~~l~~~~~~~~ 538 (783)
+..++.+.+..+-+. + . ..+.....|+.+|+||+|.+.|.|...............+....+....++
T Consensus 219 ~~~~~~i~~~~~~~g------l---~---~~~~~~~~ki~~I~NGid~~~~~p~~~~~~~~~~~~~~~~~~~~~k~~l~~ 286 (476)
T cd03791 219 PTYAREILTPEFGEG------L---D---GLLRARAGKLSGILNGIDYDVWNPATDPHLPANYSADDLEGKAENKAALQE 286 (476)
T ss_pred HhHHHHhCCCCCCcc------h---H---HHHHhccCCeEEEeCCCcCcccCccccchhhhcCCccccccHHHHHHHHHH
Confidence 887775443210000 0 0 001112578999999999999988654321111111122233444556778
Q ss_pred hhccccCCCCcEEEEEecccCCCCHHHHHHHHHHhHccCCCeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHHcCCCCcE
Q 003962 539 HLCVLKDRNKPILFTMARLDRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLNGQF 618 (783)
Q Consensus 539 ~~gll~~~~k~iIl~vGRL~~~Kgl~~LieA~~~l~~~~~~~~LvIVG~g~~~~~~~~ee~~~~~~l~~li~~~~L~~~V 618 (783)
++|+..++++++|+|+||+.+.||++.+++++.++.+. +++|+|+|+|+. ...+.++++++++ .+++
T Consensus 287 ~~g~~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~--~~~lvi~G~g~~---------~~~~~~~~~~~~~--~~~v 353 (476)
T cd03791 287 ELGLPVDPDAPLFGFVGRLTEQKGIDLLLEALPELLEL--GGQLVILGSGDP---------EYEEALRELAARY--PGRV 353 (476)
T ss_pred HcCCCcCCCCCEEEEEeeccccccHHHHHHHHHHHHHc--CcEEEEEecCCH---------HHHHHHHHHHHhC--CCcE
Confidence 88885567889999999999999999999999998764 499999999853 2345667777765 4688
Q ss_pred EEccCCCCcCChHHHHHHHHccCcEEEeCCCCCCCcHHHHHHHHcCCcEEEcCccccccccccCc------eEEEECCCC
Q 003962 619 RWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGK------SGYHIDPYH 692 (783)
Q Consensus 619 ~flG~~~~~~~~~el~~~ia~aadvfV~PS~~E~fGltvlEAMa~GlPVVat~~GG~~EiI~dg~------~G~li~p~d 692 (783)
.+++ ..+.+++..+++ ++|++++||.+|+||++++|||+||+|||+|+.||..|+|.++. +|++++|+|
T Consensus 354 ~~~~----~~~~~~~~~~~~-~aDv~l~pS~~E~~gl~~lEAma~G~pvI~~~~gg~~e~v~~~~~~~~~~~G~~~~~~~ 428 (476)
T cd03791 354 AVLI----GYDEALAHLIYA-GADFFLMPSRFEPCGLTQMYAMRYGTVPIVRATGGLADTVIDYNEDTGEGTGFVFEGYN 428 (476)
T ss_pred EEEE----eCCHHHHHHHHH-hCCEEECCCCCCCCcHHHHHHhhCCCCCEECcCCCccceEeCCcCCCCCCCeEEeCCCC
Confidence 8776 344555666777 49999999999999999999999999999999999999999988 999999999
Q ss_pred HHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Q 003962 693 GEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEEKYTWKIYSQRLLTLTG 743 (783)
Q Consensus 693 ~e~lAeaI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~~~a~~ll~ly~ 743 (783)
+++++++|.++++ ...+++.|.++++++.+ +.|||+.++++|+++|+
T Consensus 429 ~~~l~~~i~~~l~-~~~~~~~~~~~~~~~~~---~~fsw~~~a~~~~~~y~ 475 (476)
T cd03791 429 ADALLAALRRALA-LYRDPEAWRKLQRNAMA---QDFSWDRSAKEYLELYR 475 (476)
T ss_pred HHHHHHHHHHHHH-HHcCHHHHHHHHHHHhc---cCCChHHHHHHHHHHHh
Confidence 9999999988763 34578999999888865 57999999999999985
No 16
>PRK14099 glycogen synthase; Provisional
Probab=100.00 E-value=1.5e-39 Score=373.36 Aligned_cols=434 Identities=16% Similarity=0.178 Sum_probs=287.7
Q ss_pred cceEEEEcccccccccCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHHCCCceeeceeEEeCCCCCCCC--Ccccceeee
Q 003962 254 VFNVVILTPHGYFAQDDVLGYPDTGGQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRLLPDAVG--TTCGQRLEK 331 (783)
Q Consensus 254 ~~rI~iis~h~~~~~~~~lg~p~tGG~~vyv~d~araL~~eLa~~L~~~GheV~~~i~VvT~~~~~~~g--~~~~~~~e~ 331 (783)
.|||+++|.--.| -..|||..-++- .|.++|+++||+|. |+++.+..-.. ... .....
T Consensus 3 ~~~il~v~~E~~p-------~~k~ggl~dv~~--------~lp~~l~~~g~~v~----v~~P~y~~~~~~~~~~-~~~~~ 62 (485)
T PRK14099 3 PLRVLSVASEIFP-------LIKTGGLADVAG--------ALPAALKAHGVEVR----TLVPGYPAVLAGIEDA-EQVHS 62 (485)
T ss_pred CcEEEEEEecccc-------ccCCCcHHHHHH--------HHHHHHHHCCCcEE----EEeCCCcchhhhhcCc-eEEEE
Confidence 4999999977654 367999998888 56666799999999 99987754311 011 01111
Q ss_pred ec---C---------ccCeEEEEeccCCCcccc-ccc-cc-c---ccchhhHHHH--HHHHHHHHHHHc--CCCceEEEE
Q 003962 332 VY---G---------TKYSDILRVPFRTEKGVV-RKW-IS-R---FEVWPYLETY--TEDVAVEIAKEL--QGKPDLIIG 389 (783)
Q Consensus 332 i~---~---------~~~v~Ilrvp~~~~~~~~-~~~-is-r---~~i~~~l~~f--~~~~~~~l~~~l--~~~pDIIh~ 389 (783)
+. + .+++.+.-+... .++ +.. +. . .+...-.++| +..+.-++...+ +.+|||||+
T Consensus 63 ~~~~~~~~~~~~~~~~~~v~~~~~~~~---~~f~r~~~~y~~~~~~~~~d~~~rf~~f~~a~~~~~~~~~~~~~pDIiH~ 139 (485)
T PRK14099 63 FPDLFGGPARLLAARAGGLDLFVLDAP---HLYDRPGNPYVGPDGKDWPDNAQRFAALARAAAAIGQGLVPGFVPDIVHA 139 (485)
T ss_pred EeeeCCceEEEEEEEeCCceEEEEeCh---HhhCCCCCCCCCccCCCCCcHHHHHHHHHHHHHHHHhhhccCCCCCEEEE
Confidence 11 1 012222222100 010 000 00 0 0111112233 333333444332 468999999
Q ss_pred cCCCchHHHHHHHH--hcCCcEEEEecCCCccCCCCCc------hhhhhcc-ccccccchhhHhHHhhhcCCEEEcCCHH
Q 003962 390 NYSDGNIVASLLAH--KLGVTQCTIAHALEKTKYPDSD------IYWKNLD-DKYHFSCQFTADLIAMNHTDFIITSTFQ 460 (783)
Q Consensus 390 h~~~~~lva~llar--~lgvp~v~t~H~l~~~~~~~s~------~~~~~~~-~~y~f~~~~~~e~~a~~~AD~IIt~S~~ 460 (783)
|.|.+++++.++.. ..++|.|+|+|++......... ..+..+. ....+.......+.++..||.|+|+|+.
T Consensus 140 Hdw~~~l~~~~l~~~~~~~~~~V~TiHn~~~qg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~i~~ad~vitVS~~ 219 (485)
T PRK14099 140 HDWQAGLAPAYLHYSGRPAPGTVFTIHNLAFQGQFPRELLGALGLPPSAFSLDGVEYYGGIGYLKAGLQLADRITTVSPT 219 (485)
T ss_pred CCcHHHHHHHHHHhCCCCCCCEEEeCCCCCCCCcCCHHHHHHcCCChHHcCchhhhhCCCccHHHHHHHhcCeeeecChh
Confidence 99999888877764 2468999999997543311110 0111100 0001111112345678999999999998
Q ss_pred HHhhccccccccccccccccccceeeeccCCCCCCcEEEecCCccCCCCCCCchHHHhhccCchhhHHhhcChhhhhhhh
Q 003962 461 EIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEEKRRLKSFHPEIEELLYSDVENKEHL 540 (783)
Q Consensus 461 ~~~~~~~~v~qy~~~~~f~~p~l~~v~~gi~~~~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~~~~~l~~~~~~~~~~ 540 (783)
.++.+.+...-+ .+.+. +.....|+.+|+||+|.+.|.|.++.......-...++....+....++++
T Consensus 220 ~a~ei~~~~~g~------gl~~~------l~~~~~ki~vI~NGID~~~f~p~~~~~~~~~~~~~~~~~k~~~k~~l~~~~ 287 (485)
T PRK14099 220 YALEIQGPEAGM------GLDGL------LRQRADRLSGILNGIDTAVWNPATDELIAATYDVETLAARAANKAALQARF 287 (485)
T ss_pred HHHHHhcccCCc------ChHHH------HHhhCCCeEEEecCCchhhccccccchhhhcCChhHHHhHHHhHHHHHHHc
Confidence 877544321000 00000 011256899999999999998875432111100112222333445667888
Q ss_pred ccccCCCCcEEEEEecccCCCCHHHHHHHHHHhHccCCCeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHHcCCCCcE-E
Q 003962 541 CVLKDRNKPILFTMARLDRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLNGQF-R 619 (783)
Q Consensus 541 gll~~~~k~iIl~vGRL~~~Kgl~~LieA~~~l~~~~~~~~LvIVG~g~~~~~~~~ee~~~~~~l~~li~~~~L~~~V-~ 619 (783)
|+..+++.++|+++||+.++||++.|++|+.++.+ .+++|+|+|+|+. ...+.+++++++++ +++ .
T Consensus 288 gl~~~~~~~li~~VgRL~~~KG~d~Li~A~~~l~~--~~~~lvivG~G~~---------~~~~~l~~l~~~~~--~~v~~ 354 (485)
T PRK14099 288 GLDPDPDALLLGVISRLSWQKGLDLLLEALPTLLG--EGAQLALLGSGDA---------ELEARFRAAAQAYP--GQIGV 354 (485)
T ss_pred CCCcccCCcEEEEEecCCccccHHHHHHHHHHHHh--cCcEEEEEecCCH---------HHHHHHHHHHHHCC--CCEEE
Confidence 98544567899999999999999999999999875 4799999999853 23466777777764 455 7
Q ss_pred EccCCCCcCChHHHHHHHHccCcEEEeCCCCCCCcHHHHHHHHcCCcEEEcCccccccccccC---------ceEEEECC
Q 003962 620 WISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNG---------KSGYHIDP 690 (783)
Q Consensus 620 flG~~~~~~~~~el~~~ia~aadvfV~PS~~E~fGltvlEAMa~GlPVVat~~GG~~EiI~dg---------~~G~li~p 690 (783)
|+|+ .+++..++..++|+||+||.+|+||++++|||+||+|+|+|++||+.|+|.++ .+|++++|
T Consensus 355 ~~G~------~~~l~~~~~a~aDifv~PS~~E~fGl~~lEAma~G~ppVvs~~GGl~d~V~~~~~~~~~~~~~~G~l~~~ 428 (485)
T PRK14099 355 VIGY------DEALAHLIQAGADALLVPSRFEPCGLTQLCALRYGAVPVVARVGGLADTVVDANEMAIATGVATGVQFSP 428 (485)
T ss_pred EeCC------CHHHHHHHHhcCCEEEECCccCCCcHHHHHHHHCCCCcEEeCCCCccceeecccccccccCCCceEEeCC
Confidence 8883 46788877535999999999999999999999999999999999999999875 68999999
Q ss_pred CCHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHh
Q 003962 691 YHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEEKYTWKIYSQRLLTLTGVY 745 (783)
Q Consensus 691 ~d~e~lAeaI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~~~a~~ll~ly~~~ 745 (783)
+|+++++++|.+++ .+.+|++.|++|++++++ ++|||+.++++|+++|+..
T Consensus 429 ~d~~~La~ai~~a~-~l~~d~~~~~~l~~~~~~---~~fSw~~~a~~y~~lY~~l 479 (485)
T PRK14099 429 VTADALAAALRKTA-ALFADPVAWRRLQRNGMT---TDVSWRNPAQHYAALYRSL 479 (485)
T ss_pred CCHHHHHHHHHHHH-HHhcCHHHHHHHHHHhhh---hcCChHHHHHHHHHHHHHH
Confidence 99999999998754 245899999999999863 7899999999999999753
No 17
>cd03796 GT1_PIG-A_like This family is most closely related to the GT1 family of glycosyltransferases. Phosphatidylinositol glycan-class A (PIG-A), an X-linked gene in humans, is necessary for the synthesis of N-acetylglucosaminyl-phosphatidylinositol, a very early intermediate in glycosyl phosphatidylinositol (GPI)-anchor biosynthesis. The GPI-anchor is an important cellular structure that facilitates the attachment of many proteins to cell surfaces. Somatic mutations in PIG-A have been associated with Paroxysmal Nocturnal Hemoglobinuria (PNH), an acquired hematological disorder.
Probab=100.00 E-value=6e-40 Score=368.20 Aligned_cols=365 Identities=18% Similarity=0.231 Sum_probs=272.0
Q ss_pred eEEEEcccccccccCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHHCCCceeeceeEEeCCCCCCCCCcccceeeeecCc
Q 003962 256 NVVILTPHGYFAQDDVLGYPDTGGQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRLLPDAVGTTCGQRLEKVYGT 335 (783)
Q Consensus 256 rI~iis~h~~~~~~~~lg~p~tGG~~vyv~d~araL~~eLa~~L~~~GheV~~~i~VvT~~~~~~~g~~~~~~~e~i~~~ 335 (783)
||+++++..+ |..||.+.++. +|++.|+++||+|+ |+|...+...+. . ...
T Consensus 1 kI~~v~~~~~---------p~~GG~e~~~~--------~la~~L~~~G~~V~----v~~~~~~~~~~~----~----~~~ 51 (398)
T cd03796 1 RICMVSDFFY---------PNLGGVETHIY--------QLSQCLIKRGHKVV----VITHAYGNRVGI----R----YLT 51 (398)
T ss_pred CeeEEeeccc---------cccccHHHHHH--------HHHHHHHHcCCeeE----EEeccCCcCCCc----c----ccc
Confidence 6899987776 45799999999 77777899999999 998754322111 0 112
Q ss_pred cCeEEEEeccCCCccccccccccccchhhHHHHHHHHHHHHHHHcCCCceEEEEcCCCch--HHHHHHHHhcCCcEEEEe
Q 003962 336 KYSDILRVPFRTEKGVVRKWISRFEVWPYLETYTEDVAVEIAKELQGKPDLIIGNYSDGN--IVASLLAHKLGVTQCTIA 413 (783)
Q Consensus 336 ~~v~Ilrvp~~~~~~~~~~~isr~~i~~~l~~f~~~~~~~l~~~l~~~pDIIh~h~~~~~--lva~llar~lgvp~v~t~ 413 (783)
.++.+.++|...... ...+... ..+.. .++.+.. +.+|||||+|.+.+. ..+.++++..++|+|++.
T Consensus 52 ~~i~v~~~p~~~~~~-------~~~~~~~-~~~~~-~l~~~~~--~~~~DiIh~~~~~~~~~~~~~~~~~~~~~~~v~t~ 120 (398)
T cd03796 52 NGLKVYYLPFVVFYN-------QSTLPTF-FGTFP-LLRNILI--RERITIVHGHQAFSALAHEALLHARTMGLKTVFTD 120 (398)
T ss_pred CceeEEEecceeccC-------Cccccch-hhhHH-HHHHHHH--hcCCCEEEECCCCchHHHHHHHHhhhcCCcEEEEe
Confidence 357888887653210 0011111 11111 1222222 357999999987653 346777888999999999
Q ss_pred cCCCccCCCCCchhhhhccccccccchhhHhHHhhhcCCEEEcCCHHHHhhccccccccccccccccccceeeeccCCCC
Q 003962 414 HALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVF 493 (783)
Q Consensus 414 H~l~~~~~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~~~~~~~~v~qy~~~~~f~~p~l~~v~~gi~~~ 493 (783)
|+..... +..... . .......++++|.+|++|....+... ...+++
T Consensus 121 h~~~~~~----~~~~~~----~-----~~~~~~~~~~~d~ii~~s~~~~~~~~-------------------~~~~~~-- 166 (398)
T cd03796 121 HSLFGFA----DASSIH----T-----NKLLRFSLADVDHVICVSHTSKENTV-------------------LRASLD-- 166 (398)
T ss_pred ccccccc----chhhHH----h-----hHHHHHhhccCCEEEEecHhHhhHHH-------------------HHhCCC--
Confidence 9853211 100000 0 01123467899999999987654110 011233
Q ss_pred CCcEEEecCCccCCCCCCCchHHHhhccCchhhHHhhcChhhhhhhhccccCCCCcEEEEEecccCCCCHHHHHHHHHHh
Q 003962 494 DPKFNIVSPGADMSIYFPYTEEKRRLKSFHPEIEELLYSDVENKEHLCVLKDRNKPILFTMARLDRVKNLTGLVEWYGKN 573 (783)
Q Consensus 494 ~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~~~~~l~~~~~~~~~~gll~~~~k~iIl~vGRL~~~Kgl~~LieA~~~l 573 (783)
..|+.+||||+|.+.|.|.... .++++++|+++||+.+.||++.|++|+..+
T Consensus 167 ~~k~~vi~ngvd~~~f~~~~~~----------------------------~~~~~~~i~~~grl~~~Kg~~~li~a~~~l 218 (398)
T cd03796 167 PERVSVIPNAVDSSDFTPDPSK----------------------------RDNDKITIVVISRLVYRKGIDLLVGIIPEI 218 (398)
T ss_pred hhhEEEEcCccCHHHcCCCccc----------------------------CCCCceEEEEEeccchhcCHHHHHHHHHHH
Confidence 5689999999999877664321 045678999999999999999999999999
Q ss_pred HccCCCeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHHcCCCCcEEEccCCCCcCChHHHHHHHHccCcEEEeCCCCCCC
Q 003962 574 AKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAF 653 (783)
Q Consensus 574 ~~~~~~~~LvIVG~g~~~~~~~~ee~~~~~~l~~li~~~~L~~~V~flG~~~~~~~~~el~~~ia~aadvfV~PS~~E~f 653 (783)
.+..++++|+|+|+|+. .+.++++++++++.++|.|+| .++.+++..+++. +|++|+||..|+|
T Consensus 219 ~~~~~~~~l~i~G~g~~-----------~~~l~~~~~~~~l~~~v~~~G----~~~~~~~~~~l~~-ad~~v~pS~~E~~ 282 (398)
T cd03796 219 CKKHPNVRFIIGGDGPK-----------RILLEEMREKYNLQDRVELLG----AVPHERVRDVLVQ-GHIFLNTSLTEAF 282 (398)
T ss_pred HhhCCCEEEEEEeCCch-----------HHHHHHHHHHhCCCCeEEEeC----CCCHHHHHHHHHh-CCEEEeCChhhcc
Confidence 88889999999999853 366888999999999999999 7778999999995 9999999999999
Q ss_pred cHHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhCCHHH
Q 003962 654 GLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEEKYTWKI 733 (783)
Q Consensus 654 GltvlEAMa~GlPVVat~~GG~~EiI~dg~~G~li~p~d~e~lAeaI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~~ 733 (783)
|++++|||+||+|||+|+.||..|++.++. +++++ .|+++++++|.+++ .++.....+++++++++.++|||+.
T Consensus 283 g~~~~EAma~G~PVI~s~~gg~~e~i~~~~-~~~~~-~~~~~l~~~l~~~l----~~~~~~~~~~~~~~~~~~~~fs~~~ 356 (398)
T cd03796 283 CIAIVEAASCGLLVVSTRVGGIPEVLPPDM-ILLAE-PDVESIVRKLEEAI----SILRTGKHDPWSFHNRVKKMYSWED 356 (398)
T ss_pred CHHHHHHHHcCCCEEECCCCCchhheeCCc-eeecC-CCHHHHHHHHHHHH----hChhhhhhHHHHHHHHHHhhCCHHH
Confidence 999999999999999999999999998764 44454 48999999997776 5666666788999999999999999
Q ss_pred HHHHHHHHHHH
Q 003962 734 YSQRLLTLTGV 744 (783)
Q Consensus 734 ~a~~ll~ly~~ 744 (783)
++++++++|+.
T Consensus 357 ~~~~~~~~y~~ 367 (398)
T cd03796 357 VAKRTEKVYDR 367 (398)
T ss_pred HHHHHHHHHHH
Confidence 99999999864
No 18
>TIGR02149 glgA_Coryne glycogen synthase, Corynebacterium family. This model describes Corynebacterium glutamicum GlgA and closely related proteins in several other species. This enzyme is required for glycogen biosynthesis and appears to replace the distantly related TIGR02095 family of ADP-glucose type glycogen synthase in Corynebacterium glutamicum, Mycobacterium tuberculosis, Bifidobacterium longum, and Streptomyces coelicolor.
Probab=100.00 E-value=2e-38 Score=352.43 Aligned_cols=378 Identities=21% Similarity=0.317 Sum_probs=273.4
Q ss_pred ceEEEEcccccccccCCCCCCC-CCcchhhHHHHHHHHHHHHHHHHHHCCCceeeceeEEeCCCCCCCCCcccceeeeec
Q 003962 255 FNVVILTPHGYFAQDDVLGYPD-TGGQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRLLPDAVGTTCGQRLEKVY 333 (783)
Q Consensus 255 ~rI~iis~h~~~~~~~~lg~p~-tGG~~vyv~d~araL~~eLa~~L~~~GheV~~~i~VvT~~~~~~~g~~~~~~~e~i~ 333 (783)
|||++++..+. |+ .||.++++. +|+++|+++ |+|+ |+|..... .
T Consensus 1 mkI~~i~~~~~---------p~~~GG~~~~v~--------~l~~~l~~~-~~v~----v~~~~~~~-------------~ 45 (388)
T TIGR02149 1 MKVTVLTREYP---------PNVYGGAGVHVE--------ELTRELARL-MDVD----VRCFGDQR-------------F 45 (388)
T ss_pred CeeEEEecccC---------ccccccHhHHHH--------HHHHHHHHh-cCee----EEcCCCch-------------h
Confidence 79999987654 34 499999999 555666766 7777 66643211 1
Q ss_pred CccCeEEEEeccCCCccccccccccccchhhHHHHHHHHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHhcCCcEEEEe
Q 003962 334 GTKYSDILRVPFRTEKGVVRKWISRFEVWPYLETYTEDVAVEIAKELQGKPDLIIGNYSDGNIVASLLAHKLGVTQCTIA 413 (783)
Q Consensus 334 ~~~~v~Ilrvp~~~~~~~~~~~isr~~i~~~l~~f~~~~~~~l~~~l~~~pDIIh~h~~~~~lva~llar~lgvp~v~t~ 413 (783)
..+++.+.+++..... ......+..+..+.. ......+||+||+|.+.+++.+.++++..++|+|++.
T Consensus 46 ~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~---~~~~~~~~divh~~~~~~~~~~~~~~~~~~~p~v~~~ 113 (388)
T TIGR02149 46 DSEGLTVKGYRPWSEL---------KEANKALGTFSVDLA---MANDPVDADVVHSHTWYTFLAGHLAKKLYDKPLVVTA 113 (388)
T ss_pred cCCCeEEEEecChhhc---------cchhhhhhhhhHHHH---HhhCCCCCCeEeecchhhhhHHHHHHHhcCCCEEEEe
Confidence 1235666665432210 011111222221211 1111246999999998777777777778899999999
Q ss_pred cCCCccCCCCCchhhhhccccccccchhhHhHHhhhcCCEEEcCCHHHHhhccccccccccccccccccceeeeccCCCC
Q 003962 414 HALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVF 493 (783)
Q Consensus 414 H~l~~~~~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~~~~~~~~v~qy~~~~~f~~p~l~~v~~gi~~~ 493 (783)
|++...... ........+.+.. ..+...++.+|.||++|+...+.+.+.. .+++
T Consensus 114 h~~~~~~~~----~~~~~~~~~~~~~--~~~~~~~~~ad~vi~~S~~~~~~~~~~~------------------~~~~-- 167 (388)
T TIGR02149 114 HSLEPLRPW----KEEQLGGGYKLSS--WAEKTAIEAADRVIAVSGGMREDILKYY------------------PDLD-- 167 (388)
T ss_pred ecccccccc----cccccccchhHHH--HHHHHHHhhCCEEEEccHHHHHHHHHHc------------------CCCC--
Confidence 987532210 0000111121111 2356788999999999988766433221 1222
Q ss_pred CCcEEEecCCccCCCCCCCchHHHhhccCchhhHHhhcChhhhhhhhccccCCCCcEEEEEecccCCCCHHHHHHHHHHh
Q 003962 494 DPKFNIVSPGADMSIYFPYTEEKRRLKSFHPEIEELLYSDVENKEHLCVLKDRNKPILFTMARLDRVKNLTGLVEWYGKN 573 (783)
Q Consensus 494 ~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~~~~~l~~~~~~~~~~gll~~~~k~iIl~vGRL~~~Kgl~~LieA~~~l 573 (783)
..++.+||||+|.+.|.|..... .++.+|+ ++++++|+|+||+.+.||++.|++|+.++
T Consensus 168 ~~~i~vi~ng~~~~~~~~~~~~~-------------------~~~~~~~--~~~~~~i~~~Grl~~~Kg~~~li~a~~~l 226 (388)
T TIGR02149 168 PEKVHVIYNGIDTKEYKPDDGNV-------------------VLDRYGI--DRSRPYILFVGRITRQKGVPHLLDAVHYI 226 (388)
T ss_pred cceEEEecCCCChhhcCCCchHH-------------------HHHHhCC--CCCceEEEEEcccccccCHHHHHHHHHHH
Confidence 56899999999998887653322 2344666 66788999999999999999999999987
Q ss_pred HccCCCeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHHcCC-CCcEEEccCCCCcCChHHHHHHHHccCcEEEeCCCCCC
Q 003962 574 AKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKL-NGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEA 652 (783)
Q Consensus 574 ~~~~~~~~LvIVG~g~~~~~~~~ee~~~~~~l~~li~~~~L-~~~V~flG~~~~~~~~~el~~~ia~aadvfV~PS~~E~ 652 (783)
. ++++++++|+|++. .+..+++++.+..++. .++|.|++ +.++.+++..+++. +|++|+||.+|+
T Consensus 227 ~---~~~~l~i~g~g~~~-------~~~~~~~~~~~~~~~~~~~~v~~~~---~~~~~~~~~~~~~~-aDv~v~ps~~e~ 292 (388)
T TIGR02149 227 P---KDVQVVLCAGAPDT-------PEVAEEVRQAVALLDRNRTGIIWIN---KMLPKEELVELLSN-AEVFVCPSIYEP 292 (388)
T ss_pred h---hcCcEEEEeCCCCc-------HHHHHHHHHHHHHhccccCceEEec---CCCCHHHHHHHHHh-CCEEEeCCccCC
Confidence 5 47889999988652 1234566677777665 34588765 26778999999995 999999999999
Q ss_pred CcHHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCH------HHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHH
Q 003962 653 FGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHG------EQAAEILVDFFEKCKADPSYWDKISLGGLKRIE 726 (783)
Q Consensus 653 fGltvlEAMa~GlPVVat~~GG~~EiI~dg~~G~li~p~d~------e~lAeaI~~~l~~l~~dp~~~~~ms~~a~~~v~ 726 (783)
||++++|||+||+|||+|+.||..|++.++.+|++++++|+ ++++++|.+++ +|++.+++|++++++.+.
T Consensus 293 ~g~~~lEA~a~G~PvI~s~~~~~~e~i~~~~~G~~~~~~~~~~~~~~~~l~~~i~~l~----~~~~~~~~~~~~a~~~~~ 368 (388)
T TIGR02149 293 LGIVNLEAMACGTPVVASATGGIPEVVVDGETGFLVPPDNSDADGFQAELAKAINILL----ADPELAKKMGIAGRKRAE 368 (388)
T ss_pred CChHHHHHHHcCCCEEEeCCCCHHHHhhCCCceEEcCCCCCcccchHHHHHHHHHHHH----hCHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999988 88888886655 899999999999999999
Q ss_pred HhCCHHHHHHHHHHHHHH
Q 003962 727 EKYTWKIYSQRLLTLTGV 744 (783)
Q Consensus 727 ~~ysw~~~a~~ll~ly~~ 744 (783)
++|||+.+++++.++|+.
T Consensus 369 ~~~s~~~~~~~~~~~y~~ 386 (388)
T TIGR02149 369 EEFSWGSIAKKTVEMYRK 386 (388)
T ss_pred HhCCHHHHHHHHHHHHHh
Confidence 999999999999999864
No 19
>PRK15427 colanic acid biosynthesis glycosyltransferase WcaL; Provisional
Probab=100.00 E-value=1.6e-38 Score=357.89 Aligned_cols=281 Identities=18% Similarity=0.270 Sum_probs=231.1
Q ss_pred CCCceEEEEcCCCchHHHHHHHH--hcCCcEEEEecCCCccCCCCCchhhhhccccccccchhhHhHHhhhcCCEEEcCC
Q 003962 381 QGKPDLIIGNYSDGNIVASLLAH--KLGVTQCTIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITST 458 (783)
Q Consensus 381 ~~~pDIIh~h~~~~~lva~llar--~lgvp~v~t~H~l~~~~~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt~S 458 (783)
+.+||+||+|++..+..+..+++ ..+.|.++|+|+..... ......+. ......++++|+|+++|
T Consensus 116 ~~~~diihaH~~~~~~~~~~~~~~~~~~~~~~~t~Hg~d~~~--------~~~~~~~~-----~~~~~~~~~ad~vv~~S 182 (406)
T PRK15427 116 PFVADVFIAHFGPAGVTAAKLRELGVLRGKIATIFHGIDISS--------REVLNHYT-----PEYQQLFRRGDLMLPIS 182 (406)
T ss_pred cCCCCEEEEcCChHHHHHHHHHHhCCCCCCeEEEEccccccc--------chhhhhhh-----HHHHHHHHhCCEEEECC
Confidence 35799999999877777777766 34557789999853211 00001111 01234578999999999
Q ss_pred HHHHhhccccccccccccccccccceeeeccCCCCCCcEEEecCCccCCCCCCCchHHHhhccCchhhHHhhcChhhhhh
Q 003962 459 FQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEEKRRLKSFHPEIEELLYSDVENKE 538 (783)
Q Consensus 459 ~~~~~~~~~~v~qy~~~~~f~~p~l~~v~~gi~~~~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~~~~~l~~~~~~~~ 538 (783)
+...+.+.+. |++ .+|+.+||||+|.+.|.+.....
T Consensus 183 ~~~~~~l~~~--------------------g~~--~~ki~vi~nGvd~~~f~~~~~~~---------------------- 218 (406)
T PRK15427 183 DLWAGRLQKM--------------------GCP--PEKIAVSRMGVDMTRFSPRPVKA---------------------- 218 (406)
T ss_pred HHHHHHHHHc--------------------CCC--HHHEEEcCCCCCHHHcCCCcccc----------------------
Confidence 8776633221 333 67899999999998886532110
Q ss_pred hhccccCCCCcEEEEEecccCCCCHHHHHHHHHHhHccCCCeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHHcCCCCcE
Q 003962 539 HLCVLKDRNKPILFTMARLDRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLNGQF 618 (783)
Q Consensus 539 ~~gll~~~~k~iIl~vGRL~~~Kgl~~LieA~~~l~~~~~~~~LvIVG~g~~~~~~~~ee~~~~~~l~~li~~~~L~~~V 618 (783)
..++..|+|+||+.+.||++.+++|++.+.+..++++|+|+|+|+. .++++++++++++.++|
T Consensus 219 ------~~~~~~il~vGrl~~~Kg~~~ll~a~~~l~~~~~~~~l~ivG~G~~-----------~~~l~~~~~~~~l~~~V 281 (406)
T PRK15427 219 ------PATPLEIISVARLTEKKGLHVAIEACRQLKEQGVAFRYRILGIGPW-----------ERRLRTLIEQYQLEDVV 281 (406)
T ss_pred ------CCCCeEEEEEeCcchhcCHHHHHHHHHHHHhhCCCEEEEEEECchh-----------HHHHHHHHHHcCCCCeE
Confidence 2345679999999999999999999999988888999999999954 46789999999999999
Q ss_pred EEccCCCCcCChHHHHHHHHccCcEEEeCCCC------CCCcHHHHHHHHcCCcEEEcCccccccccccCceEEEECCCC
Q 003962 619 RWISSQMNRVRNGELYRYICDTKGAFVQPALY------EAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYH 692 (783)
Q Consensus 619 ~flG~~~~~~~~~el~~~ia~aadvfV~PS~~------E~fGltvlEAMa~GlPVVat~~GG~~EiI~dg~~G~li~p~d 692 (783)
.|+| .++.+++..+++. +|+||+||.. ||||++++|||+||+|||+|+.||..|+|.+|.+|++++|+|
T Consensus 282 ~~~G----~~~~~el~~~l~~-aDv~v~pS~~~~~g~~Eg~p~~llEAma~G~PVI~t~~~g~~E~v~~~~~G~lv~~~d 356 (406)
T PRK15427 282 EMPG----FKPSHEVKAMLDD-ADVFLLPSVTGADGDMEGIPVALMEAMAVGIPVVSTLHSGIPELVEADKSGWLVPEND 356 (406)
T ss_pred EEeC----CCCHHHHHHHHHh-CCEEEECCccCCCCCccCccHHHHHHHhCCCCEEEeCCCCchhhhcCCCceEEeCCCC
Confidence 9999 7778999999996 9999999974 999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhC-CHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Q 003962 693 GEQAAEILVDFFEKCKA-DPSYWDKISLGGLKRIEEKYTWKIYSQRLLTLTGV 744 (783)
Q Consensus 693 ~e~lAeaI~~~l~~l~~-dp~~~~~ms~~a~~~v~~~ysw~~~a~~ll~ly~~ 744 (783)
++++|++|.+++ + |++.+++|+++|++++.++|||+.+++++.++|+.
T Consensus 357 ~~~la~ai~~l~----~~d~~~~~~~~~~ar~~v~~~f~~~~~~~~l~~~~~~ 405 (406)
T PRK15427 357 AQALAQRLAAFS----QLDTDELAPVVKRAREKVETDFNQQVINRELASLLQA 405 (406)
T ss_pred HHHHHHHHHHHH----hCCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhh
Confidence 999999997665 7 99999999999999999999999999999999864
No 20
>cd04962 GT1_like_5 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=100.00 E-value=3.7e-38 Score=347.28 Aligned_cols=366 Identities=20% Similarity=0.293 Sum_probs=265.9
Q ss_pred ceEEEEcccccccccCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHHCCCceeeceeEEeCCCCCCCCCcccceeeeecC
Q 003962 255 FNVVILTPHGYFAQDDVLGYPDTGGQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRLLPDAVGTTCGQRLEKVYG 334 (783)
Q Consensus 255 ~rI~iis~h~~~~~~~~lg~p~tGG~~vyv~d~araL~~eLa~~L~~~GheV~~~i~VvT~~~~~~~g~~~~~~~e~i~~ 334 (783)
|||++++. |..||.+.++. +|++.|+++||+|+ |+|...+.... ..
T Consensus 1 mki~~~~~------------p~~gG~~~~~~--------~la~~L~~~G~~v~----v~~~~~~~~~~----------~~ 46 (371)
T cd04962 1 MKIGIVCY------------PTYGGSGVVAT--------ELGKALARRGHEVH----FITSSRPFRLD----------EY 46 (371)
T ss_pred CceeEEEE------------eCCCCccchHH--------HHHHHHHhcCCceE----EEecCCCcchh----------hh
Confidence 78999972 34599999999 66777899999999 88875332100 01
Q ss_pred ccCeEEEEeccCCCccccccccccccchhhHHHHHHHHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHh----cCCcEE
Q 003962 335 TKYSDILRVPFRTEKGVVRKWISRFEVWPYLETYTEDVAVEIAKELQGKPDLIIGNYSDGNIVASLLAHK----LGVTQC 410 (783)
Q Consensus 335 ~~~v~Ilrvp~~~~~~~~~~~isr~~i~~~l~~f~~~~~~~l~~~l~~~pDIIh~h~~~~~lva~llar~----lgvp~v 410 (783)
..+..+..++.... +. .....+.......+.+.+ . +.+||+||+|++.+...+..++++ .++|++
T Consensus 47 ~~~~~~~~~~~~~~-~~-------~~~~~~~~~~~~~l~~~i-~--~~~~divh~~~~~~~~~~~~~~~~~~~~~~~~~i 115 (371)
T cd04962 47 SPNIFFHEVEVPQY-PL-------FQYPPYDLALASKIAEVA-K--RYKLDLLHVHYAVPHAVAAYLAREILGKKDLPVV 115 (371)
T ss_pred ccCeEEEEeccccc-ch-------hhcchhHHHHHHHHHHHH-h--cCCccEEeecccCCccHHHHHHHHhcCcCCCcEE
Confidence 11233333332211 00 011111111222222222 2 358999999987654443344332 279999
Q ss_pred EEecCCCccCCCCCchhhhhccccccccchhhHhHHhhhcCCEEEcCCHHHHhhccccccccccccccccccceeeeccC
Q 003962 411 TIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGI 490 (783)
Q Consensus 411 ~t~H~l~~~~~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~~~~~~~~v~qy~~~~~f~~p~l~~v~~gi 490 (783)
++.|+....... ....+. ...+..++.+|.|+++|....+.+.+. |
T Consensus 116 ~~~h~~~~~~~~--------~~~~~~-----~~~~~~~~~~d~ii~~s~~~~~~~~~~---~------------------ 161 (371)
T cd04962 116 TTLHGTDITLVG--------QDPSFQ-----PATRFSIEKSDGVTAVSESLRQETYEL---F------------------ 161 (371)
T ss_pred EEEcCCcccccc--------ccccch-----HHHHHHHhhCCEEEEcCHHHHHHHHHh---c------------------
Confidence 999975321110 011111 124467889999999998876533221 0
Q ss_pred CCCCCcEEEecCCccCCCCCCCchHHHhhccCchhhHHhhcChhhhhhhhccccCCCCcEEEEEecccCCCCHHHHHHHH
Q 003962 491 DVFDPKFNIVSPGADMSIYFPYTEEKRRLKSFHPEIEELLYSDVENKEHLCVLKDRNKPILFTMARLDRVKNLTGLVEWY 570 (783)
Q Consensus 491 ~~~~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~~~~~l~~~~~~~~~~gll~~~~k~iIl~vGRL~~~Kgl~~LieA~ 570 (783)
....++.+||||+|...|.+...... ++.++. .+++++++++||+.+.||++.+++++
T Consensus 162 -~~~~~i~vi~n~~~~~~~~~~~~~~~-------------------~~~~~~--~~~~~~il~~g~l~~~K~~~~li~a~ 219 (371)
T cd04962 162 -DITKEIEVIPNFVDEDRFRPKPDEAL-------------------KRRLGA--PEGEKVLIHISNFRPVKRIDDVIRIF 219 (371)
T ss_pred -CCcCCEEEecCCcCHhhcCCCchHHH-------------------HHhcCC--CCCCeEEEEecccccccCHHHHHHHH
Confidence 11568999999999887765433211 233455 56778899999999999999999999
Q ss_pred HHhHccCCCeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHHcCCCCcEEEccCCCCcCChHHHHHHHHccCcEEEeCCCC
Q 003962 571 GKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALY 650 (783)
Q Consensus 571 ~~l~~~~~~~~LvIVG~g~~~~~~~~ee~~~~~~l~~li~~~~L~~~V~flG~~~~~~~~~el~~~ia~aadvfV~PS~~ 650 (783)
..+.+. .+++|+++|+|++ .+.+++.++++++.++|.|+|.+ +++..+++. +|++|+||..
T Consensus 220 ~~l~~~-~~~~l~i~G~g~~-----------~~~~~~~~~~~~~~~~v~~~g~~------~~~~~~~~~-~d~~v~ps~~ 280 (371)
T cd04962 220 AKVRKE-VPARLLLVGDGPE-----------RSPAERLARELGLQDDVLFLGKQ------DHVEELLSI-ADLFLLPSEK 280 (371)
T ss_pred HHHHhc-CCceEEEEcCCcC-----------HHHHHHHHHHcCCCceEEEecCc------ccHHHHHHh-cCEEEeCCCc
Confidence 998765 5689999999965 25677888889998999999943 357788885 9999999999
Q ss_pred CCCcHHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhCC
Q 003962 651 EAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEEKYT 730 (783)
Q Consensus 651 E~fGltvlEAMa~GlPVVat~~GG~~EiI~dg~~G~li~p~d~e~lAeaI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ys 730 (783)
|+||++++|||+||+|||+|+.||.+|++.++.+|++++++|+++++++|.+++ +|++.+++|++++++.+.++||
T Consensus 281 E~~~~~~~EAma~g~PvI~s~~~~~~e~i~~~~~G~~~~~~~~~~l~~~i~~l~----~~~~~~~~~~~~~~~~~~~~fs 356 (371)
T cd04962 281 ESFGLAALEAMACGVPVVASNAGGIPEVVKHGETGFLVDVGDVEAMAEYALSLL----EDDELWQEFSRAARNRAAERFD 356 (371)
T ss_pred CCCccHHHHHHHcCCCEEEeCCCCchhhhcCCCceEEcCCCCHHHHHHHHHHHH----hCHHHHHHHHHHHHHHHHHhCC
Confidence 999999999999999999999999999999999999999999999999997665 8999999999999999889999
Q ss_pred HHHHHHHHHHHHHH
Q 003962 731 WKIYSQRLLTLTGV 744 (783)
Q Consensus 731 w~~~a~~ll~ly~~ 744 (783)
|+.+++++.++|+.
T Consensus 357 ~~~~~~~~~~~y~~ 370 (371)
T cd04962 357 SERIVPQYEALYRR 370 (371)
T ss_pred HHHHHHHHHHHHHh
Confidence 99999999999863
No 21
>PLN02871 UDP-sulfoquinovose:DAG sulfoquinovosyltransferase
Probab=100.00 E-value=1.9e-38 Score=363.58 Aligned_cols=374 Identities=17% Similarity=0.222 Sum_probs=264.2
Q ss_pred CCcceEEEEcccccccccCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHHCCCceeeceeEEeCCCCCCCCCcccceeee
Q 003962 252 PMVFNVVILTPHGYFAQDDVLGYPDTGGQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRLLPDAVGTTCGQRLEK 331 (783)
Q Consensus 252 pm~~rI~iis~h~~~~~~~~lg~p~tGG~~vyv~d~araL~~eLa~~L~~~GheV~~~i~VvT~~~~~~~g~~~~~~~e~ 331 (783)
.++|||++++ +..| -+..||.+.++. +|+++|+++||+|+ |+|....... .
T Consensus 56 ~~~mrI~~~~-~~~~-------~~~~gG~~~~~~--------~l~~~L~~~G~eV~----vlt~~~~~~~---------~ 106 (465)
T PLN02871 56 SRPRRIALFV-EPSP-------FSYVSGYKNRFQ--------NFIRYLREMGDEVL----VVTTDEGVPQ---------E 106 (465)
T ss_pred CCCceEEEEE-CCcC-------CcccccHHHHHH--------HHHHHHHHCCCeEE----EEecCCCCCc---------c
Confidence 4569999996 3321 145799999999 66677799999999 9986532110 0
Q ss_pred ecCccCeEEEEeccCCCccccccccccccchhhHHHHHHHHHHHHHHHcCCCceEEEEcCCCc-hHHHHHHHHhcCCcEE
Q 003962 332 VYGTKYSDILRVPFRTEKGVVRKWISRFEVWPYLETYTEDVAVEIAKELQGKPDLIIGNYSDG-NIVASLLAHKLGVTQC 410 (783)
Q Consensus 332 i~~~~~v~Ilrvp~~~~~~~~~~~isr~~i~~~l~~f~~~~~~~l~~~l~~~pDIIh~h~~~~-~lva~llar~lgvp~v 410 (783)
..++.+.+++..+. +. .... .+.+ .+...+. .+++ +.+|||||+|.+.. .+.+..+++..++|+|
T Consensus 107 ---~~g~~v~~~~~~~~-~~----~~~~-~~~~--~~~~~l~-~~i~--~~kpDiIh~~~~~~~~~~~~~~ak~~~ip~V 172 (465)
T PLN02871 107 ---FHGAKVIGSWSFPC-PF----YQKV-PLSL--ALSPRII-SEVA--RFKPDLIHASSPGIMVFGALFYAKLLCVPLV 172 (465)
T ss_pred ---ccCceeeccCCcCC-cc----CCCc-eeec--cCCHHHH-HHHH--hCCCCEEEECCCchhHHHHHHHHHHhCCCEE
Confidence 11334433322111 00 0000 0000 0001122 2222 24799999998654 3456667788899999
Q ss_pred EEecCCCccCCCCCchhhhhccccccccchhhHhHHhhhcCCEEEcCCHHHHhhccccccccccccccccccceeeeccC
Q 003962 411 TIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGI 490 (783)
Q Consensus 411 ~t~H~l~~~~~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~~~~~~~~v~qy~~~~~f~~p~l~~v~~gi 490 (783)
++.|+......+... +..+... .....+..++.+|.|+++|....+.+.+. +.
T Consensus 173 ~~~h~~~~~~~~~~~--~~~~~~~-----~~~~~r~~~~~ad~ii~~S~~~~~~l~~~--------------------~~ 225 (465)
T PLN02871 173 MSYHTHVPVYIPRYT--FSWLVKP-----MWDIIRFLHRAADLTLVTSPALGKELEAA--------------------GV 225 (465)
T ss_pred EEEecCchhhhhccc--chhhHHH-----HHHHHHHHHhhCCEEEECCHHHHHHHHHc--------------------CC
Confidence 999985432211111 1111000 01123456789999999998876643221 11
Q ss_pred CCCCCcEEEecCCccCCCCCCCchHHHhhccCchhhHHhhcChhhhhhhhccccCCCCcEEEEEecccCCCCHHHHHHHH
Q 003962 491 DVFDPKFNIVSPGADMSIYFPYTEEKRRLKSFHPEIEELLYSDVENKEHLCVLKDRNKPILFTMARLDRVKNLTGLVEWY 570 (783)
Q Consensus 491 ~~~~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~~~~~l~~~~~~~~~~gll~~~~k~iIl~vGRL~~~Kgl~~LieA~ 570 (783)
...+++.+||||+|.+.|.|....... +.++.. ..+++++|+|+||+.+.||++.+++++
T Consensus 226 -~~~~kv~vi~nGvd~~~f~p~~~~~~~------------------~~~~~~-~~~~~~~i~~vGrl~~~K~~~~li~a~ 285 (465)
T PLN02871 226 -TAANRIRVWNKGVDSESFHPRFRSEEM------------------RARLSG-GEPEKPLIVYVGRLGAEKNLDFLKRVM 285 (465)
T ss_pred -CCcCeEEEeCCccCccccCCccccHHH------------------HHHhcC-CCCCCeEEEEeCCCchhhhHHHHHHHH
Confidence 115689999999999988775432111 112211 134678999999999999999999999
Q ss_pred HHhHccCCCeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHHcCCCCcEEEccCCCCcCChHHHHHHHHccCcEEEeCCCC
Q 003962 571 GKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALY 650 (783)
Q Consensus 571 ~~l~~~~~~~~LvIVG~g~~~~~~~~ee~~~~~~l~~li~~~~L~~~V~flG~~~~~~~~~el~~~ia~aadvfV~PS~~ 650 (783)
+++ ++++|+|+|+|+. .++++++++. .+|.|+| .++.+++..+|+. +|++|+||..
T Consensus 286 ~~~----~~~~l~ivG~G~~-----------~~~l~~~~~~----~~V~f~G----~v~~~ev~~~~~~-aDv~V~pS~~ 341 (465)
T PLN02871 286 ERL----PGARLAFVGDGPY-----------REELEKMFAG----TPTVFTG----MLQGDELSQAYAS-GDVFVMPSES 341 (465)
T ss_pred HhC----CCcEEEEEeCChH-----------HHHHHHHhcc----CCeEEec----cCCHHHHHHHHHH-CCEEEECCcc
Confidence 876 5799999999853 3455555543 4799999 7777899999995 9999999999
Q ss_pred CCCcHHHHHHHHcCCcEEEcCcccccccccc---CceEEEECCCCHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHH
Q 003962 651 EAFGLTVVEAMTCGLPTFATCKGGPAEIIVN---GKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEE 727 (783)
Q Consensus 651 E~fGltvlEAMa~GlPVVat~~GG~~EiI~d---g~~G~li~p~d~e~lAeaI~~~l~~l~~dp~~~~~ms~~a~~~v~~ 727 (783)
|+||++++|||+||+|||+|+.||..|++.+ +.+|++++|+|+++++++|.+++ +|++.+++|++++++.+ +
T Consensus 342 E~~g~~vlEAmA~G~PVI~s~~gg~~eiv~~~~~~~~G~lv~~~d~~~la~~i~~ll----~~~~~~~~~~~~a~~~~-~ 416 (465)
T PLN02871 342 ETLGFVVLEAMASGVPVVAARAGGIPDIIPPDQEGKTGFLYTPGDVDDCVEKLETLL----ADPELRERMGAAAREEV-E 416 (465)
T ss_pred cccCcHHHHHHHcCCCEEEcCCCCcHhhhhcCCCCCceEEeCCCCHHHHHHHHHHHH----hCHHHHHHHHHHHHHHH-H
Confidence 9999999999999999999999999999999 99999999999999999997666 89999999999999988 6
Q ss_pred hCCHHHHHHHHHH-HHHH
Q 003962 728 KYTWKIYSQRLLT-LTGV 744 (783)
Q Consensus 728 ~ysw~~~a~~ll~-ly~~ 744 (783)
+|||+.+++++++ .|..
T Consensus 417 ~fsw~~~a~~l~~~~Y~~ 434 (465)
T PLN02871 417 KWDWRAATRKLRNEQYSA 434 (465)
T ss_pred hCCHHHHHHHHHHHHHHH
Confidence 8999999999998 5764
No 22
>PRK15484 lipopolysaccharide 1,2-N-acetylglucosaminetransferase; Provisional
Probab=100.00 E-value=7.1e-38 Score=349.80 Aligned_cols=375 Identities=18% Similarity=0.232 Sum_probs=275.8
Q ss_pred CcceEEEEcccccccccCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHHCCCceeeceeEEeCCCCCCCCCcccceeeee
Q 003962 253 MVFNVVILTPHGYFAQDDVLGYPDTGGQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRLLPDAVGTTCGQRLEKV 332 (783)
Q Consensus 253 m~~rI~iis~h~~~~~~~~lg~p~tGG~~vyv~d~araL~~eLa~~L~~~GheV~~~i~VvT~~~~~~~g~~~~~~~e~i 332 (783)
|+-||++++.-.+|-|. ...||+++++. +++++|+. +|+ |+|...+.- + ..+
T Consensus 1 ~~~~~~~~~~~~~~~p~-----~~~g~ve~~~~--------~~~~~l~~---~~~----~~~~~~~~~--~----~~~-- 52 (380)
T PRK15484 1 MIDKIIFTVTPIFSIPP-----RGAAAVETWIY--------QVAKRTSI---PNR----IACIKNPGY--P----EYT-- 52 (380)
T ss_pred CCceEEEEeccCCCCCC-----ccccHHHHHHH--------HhhhhccC---Cee----EEEecCCCC--C----chh--
Confidence 77899999887776543 34699999999 66666743 999 999876531 0 000
Q ss_pred cCccCeEEEEeccCCCcc-ccccccccccchhhHHHHHHHHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHhcCCcEEE
Q 003962 333 YGTKYSDILRVPFRTEKG-VVRKWISRFEVWPYLETYTEDVAVEIAKELQGKPDLIIGNYSDGNIVASLLAHKLGVTQCT 411 (783)
Q Consensus 333 ~~~~~v~Ilrvp~~~~~~-~~~~~isr~~i~~~l~~f~~~~~~~l~~~l~~~pDIIh~h~~~~~lva~llar~lgvp~v~ 411 (783)
...+|+.++++++....+ ...+|.+. ..++| .......+......++||||+|... .+...+..+..++|.+.
T Consensus 53 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~----~~~~~~~~~~~~~~~~~vi~v~~~~-~~~~~~~~~~~~~~~v~ 126 (380)
T PRK15484 53 KVNDNCDIHYIGFSRIYKRLFQKWTRL-DPLPY----SQRILNIAHKFTITKDSVIVIHNSM-KLYRQIRERAPQAKLVM 126 (380)
T ss_pred hccCCCceEEEEeccccchhhhhhhcc-CchhH----HHHHHHHHHhcCCCCCcEEEEeCcH-HhHHHHHhhCCCCCEEE
Confidence 112357778876643211 11222222 22333 2223333333223579999999754 34555555666789999
Q ss_pred EecCCCccCCCCCchhhhhccccccccchhhHhHHhhhcCCEEEcCCHHHHhhccccccccccccccccccceeeeccCC
Q 003962 412 IAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGID 491 (783)
Q Consensus 412 t~H~l~~~~~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~~~~~~~~v~qy~~~~~f~~p~l~~v~~gi~ 491 (783)
+.|+... + ..++.++.||++|+...+.+.+. .+
T Consensus 127 ~~h~~~~--------------~------------~~~~~~~~ii~~S~~~~~~~~~~---------------------~~ 159 (380)
T PRK15484 127 HMHNAFE--------------P------------ELLDKNAKIIVPSQFLKKFYEER---------------------LP 159 (380)
T ss_pred EEecccC--------------h------------hHhccCCEEEEcCHHHHHHHHhh---------------------CC
Confidence 9996311 0 12446799999998776532211 12
Q ss_pred CCCCcEEEecCCccCCCCCCCchHHHhhccCchhhHHhhcChhhhhhhhccccCCCCcEEEEEecccCCCCHHHHHHHHH
Q 003962 492 VFDPKFNIVSPGADMSIYFPYTEEKRRLKSFHPEIEELLYSDVENKEHLCVLKDRNKPILFTMARLDRVKNLTGLVEWYG 571 (783)
Q Consensus 492 ~~~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~~~~~l~~~~~~~~~~gll~~~~k~iIl~vGRL~~~Kgl~~LieA~~ 571 (783)
..++.+||||+|.+.|.+..... .++.+|+ ++++++|+|+||+.+.||++.|++|+.
T Consensus 160 --~~~i~vIpngvd~~~~~~~~~~~-------------------~~~~~~~--~~~~~~il~~Grl~~~Kg~~~Li~A~~ 216 (380)
T PRK15484 160 --NADISIVPNGFCLETYQSNPQPN-------------------LRQQLNI--SPDETVLLYAGRISPDKGILLLMQAFE 216 (380)
T ss_pred --CCCEEEecCCCCHHHcCCcchHH-------------------HHHHhCC--CCCCeEEEEeccCccccCHHHHHHHHH
Confidence 56789999999998887643321 1234565 556788999999999999999999999
Q ss_pred HhHccCCCeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHHcCCCCcEEEccCCCCcCChHHHHHHHHccCcEEEeCCCC-
Q 003962 572 KNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALY- 650 (783)
Q Consensus 572 ~l~~~~~~~~LvIVG~g~~~~~~~~ee~~~~~~l~~li~~~~L~~~V~flG~~~~~~~~~el~~~ia~aadvfV~PS~~- 650 (783)
++.+..|+++|+|+|+|+... ..+...+.+++++++++++ .+|.|+| .++.+++..+++. +|++|+||.+
T Consensus 217 ~l~~~~p~~~lvivG~g~~~~--~~~~~~~~~~l~~~~~~l~--~~v~~~G----~~~~~~l~~~~~~-aDv~v~pS~~~ 287 (380)
T PRK15484 217 KLATAHSNLKLVVVGDPTASS--KGEKAAYQKKVLEAAKRIG--DRCIMLG----GQPPEKMHNYYPL-ADLVVVPSQVE 287 (380)
T ss_pred HHHHhCCCeEEEEEeCCcccc--ccchhHHHHHHHHHHHhcC--CcEEEeC----CCCHHHHHHHHHh-CCEEEeCCCCc
Confidence 998888999999999986521 1122345566777777765 5899999 7777899999995 9999999975
Q ss_pred CCCcHHHHHHHHcCCcEEEcCccccccccccCceEE-EECCCCHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhC
Q 003962 651 EAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGY-HIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEEKY 729 (783)
Q Consensus 651 E~fGltvlEAMa~GlPVVat~~GG~~EiI~dg~~G~-li~p~d~e~lAeaI~~~l~~l~~dp~~~~~ms~~a~~~v~~~y 729 (783)
|+||++++|||+||+|||+|+.||..|++.++.+|+ +++|.|++++|++|.+++ +|++. .+|++++++.+.++|
T Consensus 288 E~f~~~~lEAma~G~PVI~s~~gg~~Eiv~~~~~G~~l~~~~d~~~la~~I~~ll----~d~~~-~~~~~~ar~~~~~~f 362 (380)
T PRK15484 288 EAFCMVAVEAMAAGKPVLASTKGGITEFVLEGITGYHLAEPMTSDSIISDINRTL----ADPEL-TQIAEQAKDFVFSKY 362 (380)
T ss_pred cccccHHHHHHHcCCCEEEeCCCCcHhhcccCCceEEEeCCCCHHHHHHHHHHHH----cCHHH-HHHHHHHHHHHHHhC
Confidence 999999999999999999999999999999999999 568899999999996665 88885 789999999999999
Q ss_pred CHHHHHHHHHHHHHHh
Q 003962 730 TWKIYSQRLLTLTGVY 745 (783)
Q Consensus 730 sw~~~a~~ll~ly~~~ 745 (783)
||+.++++++++|..|
T Consensus 363 sw~~~a~~~~~~l~~~ 378 (380)
T PRK15484 363 SWEGVTQRFEEQIHNW 378 (380)
T ss_pred CHHHHHHHHHHHHHHh
Confidence 9999999999998764
No 23
>cd03818 GT1_ExpC_like This family is most closely related to the GT1 family of glycosyltransferases. ExpC in Rhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucan (exopolysaccharide II).
Probab=100.00 E-value=3.9e-37 Score=345.05 Aligned_cols=363 Identities=15% Similarity=0.207 Sum_probs=247.6
Q ss_pred HHHHHHHHCCCceeeceeEEeCCCCCCCCCcccceeeeecCccCeEEEEeccCCCccccccccccccchhhHHHHHH---
Q 003962 294 EMLLRIKQQGLDITPQILIITRLLPDAVGTTCGQRLEKVYGTKYSDILRVPFRTEKGVVRKWISRFEVWPYLETYTE--- 370 (783)
Q Consensus 294 eLa~~L~~~GheV~~~i~VvT~~~~~~~g~~~~~~~e~i~~~~~v~Ilrvp~~~~~~~~~~~isr~~i~~~l~~f~~--- 370 (783)
+|+++|+++||+|+ ++|....... .+ ++++++++..+... ...++|...+..
T Consensus 15 ~la~~L~~~G~~v~----~~~~~~~~~~-----------~~--~v~~~~~~~~~~~~--------~~~~~~~~~~~~~~~ 69 (396)
T cd03818 15 HLAPALAAQGHEVV----FLTEPNAAPP-----------PG--GVRVVRYRPPRGPT--------SGTHPYLREFEEAVL 69 (396)
T ss_pred HHHHHHHHCCCEEE----EEecCCCCCC-----------CC--CeeEEEecCCCCCC--------CCCCccchhHHHHHH
Confidence 57778899999999 9987643211 11 57888876543211 022222222211
Q ss_pred ---HHHHHHHH--HcCCCceEEEEcCCCchHHHHHHHHh-cCCcEEEEecCCCccCCCCCchhhh-hcccc----ccccc
Q 003962 371 ---DVAVEIAK--ELQGKPDLIIGNYSDGNIVASLLAHK-LGVTQCTIAHALEKTKYPDSDIYWK-NLDDK----YHFSC 439 (783)
Q Consensus 371 ---~~~~~l~~--~l~~~pDIIh~h~~~~~lva~llar~-lgvp~v~t~H~l~~~~~~~s~~~~~-~~~~~----y~f~~ 439 (783)
.+...+.. ..+.+|||||+|...+ .+..+++. .++|+|...|-+..... ++.... ..... .+...
T Consensus 70 ~~~~~~~~~~~~~~~~~~pdvi~~h~~~~--~~~~l~~~~~~~~~v~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 145 (396)
T cd03818 70 RGQAVARALLALRAKGFRPDVIVAHPGWG--ETLFLKDVWPDAPLIGYFEFYYRAEG--ADVGFDPEFPPSLDDALRLRN 145 (396)
T ss_pred HHHHHHHHHHHHHhcCCCCCEEEECCccc--hhhhHHHhCCCCCEEEEEeeeecCCC--CCCCCCCCCCCchhHHHHHHH
Confidence 11112221 2245899999997544 22334444 46888876653221110 110000 00000 11111
Q ss_pred hhhHhHHhhhcCCEEEcCCHHHHhhccccccccccccccccccceeeeccCCCCCCcEEEecCCccCCCCCCCchHHHhh
Q 003962 440 QFTADLIAMNHTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEEKRRL 519 (783)
Q Consensus 440 ~~~~e~~a~~~AD~IIt~S~~~~~~~~~~v~qy~~~~~f~~p~l~~v~~gi~~~~~k~~VIpnGvD~~~f~p~~~~~~r~ 519 (783)
........++.+|.+|++|....+.+.+. +..|+.|||||+|.+.|.|........
T Consensus 146 ~~~~~~~~~~~ad~vi~~s~~~~~~~~~~------------------------~~~ki~vI~ngvd~~~f~~~~~~~~~~ 201 (396)
T cd03818 146 RNALILLALAQADAGVSPTRWQRSTFPAE------------------------LRSRISVIHDGIDTDRLRPDPQARLRL 201 (396)
T ss_pred hhhHhHHHHHhCCEEECCCHHHHhhCcHh------------------------hccceEEeCCCccccccCCCchhhhcc
Confidence 11123457899999999998876632211 146899999999999988765432211
Q ss_pred ccCchhhHHhhcChhhhhhhhccccCCCCcEEEEEec-ccCCCCHHHHHHHHHHhHccCCCeEEEEEeCCCCCCCccHHH
Q 003962 520 KSFHPEIEELLYSDVENKEHLCVLKDRNKPILFTMAR-LDRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEE 598 (783)
Q Consensus 520 ~~~~~~~~~~l~~~~~~~~~~gll~~~~k~iIl~vGR-L~~~Kgl~~LieA~~~l~~~~~~~~LvIVG~g~~~~~~~~ee 598 (783)
. ...++ .+++++|+|+|| +.+.||++.+++|+.++.+..|+++|+|+|++....+...+.
T Consensus 202 ~-----------------~~~~~--~~~~~~i~~vgR~l~~~Kg~~~ll~a~~~l~~~~~~~~lvivG~~~~~~g~~~~~ 262 (396)
T cd03818 202 P-----------------NGRVL--TPGDEVITFVARNLEPYRGFHVFMRALPRLLRARPDARVVIVGGDGVSYGAPPPD 262 (396)
T ss_pred c-----------------ccccC--CCCCeEEEEECCCcccccCHHHHHHHHHHHHHHCCCcEEEEEcCCCcccCCCCCC
Confidence 0 11122 456789999998 999999999999999998888999999999853211110000
Q ss_pred H-HHHHHHHHHHHHcC---CCCcEEEccCCCCcCChHHHHHHHHccCcEEEeCCCCCCCcHHHHHHHHcCCcEEEcCccc
Q 003962 599 Q-AEMKKMYSLIDQYK---LNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGG 674 (783)
Q Consensus 599 ~-~~~~~l~~li~~~~---L~~~V~flG~~~~~~~~~el~~~ia~aadvfV~PS~~E~fGltvlEAMa~GlPVVat~~GG 674 (783)
. .+.+ .++++++ ..++|.|+| .++.+++..+++. +|++|+||..|++|++++||||||+|||+|+.||
T Consensus 263 ~~~~~~---~~~~~~~~~~~~~~V~f~G----~v~~~~~~~~l~~-adv~v~~s~~e~~~~~llEAmA~G~PVIas~~~g 334 (396)
T cd03818 263 GESWKQ---HMLDELGGRLDLSRVHFLG----RVPYDQYLALLQV-SDVHVYLTYPFVLSWSLLEAMACGCLVVGSDTAP 334 (396)
T ss_pred cccHHH---HHHHHhhcccCcceEEEeC----CCCHHHHHHHHHh-CcEEEEcCcccccchHHHHHHHCCCCEEEcCCCC
Confidence 0 0112 2223322 247899999 7788999999995 9999999999999999999999999999999999
Q ss_pred cccccccCceEEEECCCCHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHH
Q 003962 675 PAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEEKYTWKIYSQRLLT 740 (783)
Q Consensus 675 ~~EiI~dg~~G~li~p~d~e~lAeaI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~~~a~~ll~ 740 (783)
..|+|.++.+|++++++|++++|++|.+++ +|++.+++|+++|++++.++|||+.++++|++
T Consensus 335 ~~e~i~~~~~G~lv~~~d~~~la~~i~~ll----~~~~~~~~l~~~ar~~~~~~fs~~~~~~~~~~ 396 (396)
T cd03818 335 VREVITDGENGLLVDFFDPDALAAAVIELL----DDPARRARLRRAARRTALRYDLLSVCLPRQLA 396 (396)
T ss_pred chhhcccCCceEEcCCCCHHHHHHHHHHHH----hCHHHHHHHHHHHHHHHHHhccHHHHHHHHhC
Confidence 999999999999999999999999997666 89999999999999999889999999999863
No 24
>cd03805 GT1_ALG2_like This family is most closely related to the GT1 family of glycosyltransferases. ALG2, a 1,3-mannosyltransferase, in yeast catalyzes the mannosylation of Man(2)GlcNAc(2)-dolichol diphosphate and Man(1)GlcNAc(2)-dolichol diphosphate to form Man(3)GlcNAc(2)-dolichol diphosphate. A deficiency of this enzyme causes an abnormal accumulation of Man1GlcNAc2-PP-dolichol and Man2GlcNAc2-PP-dolichol, which is associated with a type of congenital disorders of glycosylation (CDG), designated CDG-Ii, in humans.
Probab=100.00 E-value=7.2e-37 Score=340.49 Aligned_cols=386 Identities=20% Similarity=0.278 Sum_probs=262.6
Q ss_pred ceEEEEcccccccccCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHHCCCceeeceeEEeCCCCCCCCCcccceeeeecC
Q 003962 255 FNVVILTPHGYFAQDDVLGYPDTGGQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRLLPDAVGTTCGQRLEKVYG 334 (783)
Q Consensus 255 ~rI~iis~h~~~~~~~~lg~p~tGG~~vyv~d~araL~~eLa~~L~~~GheV~~~i~VvT~~~~~~~g~~~~~~~e~i~~ 334 (783)
|||+++.|... .||.++++. +|+++|+++||+|+ |+|...+.. .+. ....+
T Consensus 1 mkIl~~~~~~~-----------~gG~e~~~~--------~la~~L~~~G~~V~----v~~~~~~~~---~~~---~~~~~ 51 (392)
T cd03805 1 LRVAFIHPDLG-----------IGGAERLVV--------DAALALQSRGHEVT----IYTSHHDPS---HCF---EETKD 51 (392)
T ss_pred CeEEEECCCCC-----------CchHHHHHH--------HHHHHHHhCCCeEE----EEcCCCCch---hcc---hhccC
Confidence 79999976643 589999999 66667799999999 998643211 000 00110
Q ss_pred ccCeEEEEeccCCCccccccccccccchhhHHHHHHHHHHHHH--HHcCCCceEEEEcCCCchHHHHHHHHhcCCcEEEE
Q 003962 335 TKYSDILRVPFRTEKGVVRKWISRFEVWPYLETYTEDVAVEIA--KELQGKPDLIIGNYSDGNIVASLLAHKLGVTQCTI 412 (783)
Q Consensus 335 ~~~v~Ilrvp~~~~~~~~~~~isr~~i~~~l~~f~~~~~~~l~--~~l~~~pDIIh~h~~~~~lva~llar~lgvp~v~t 412 (783)
.++.+...+.....+. ..+ ...+..+.......+. .....++|+||+|....+.. ++....+.|++++
T Consensus 52 -~~~~i~~~~~~~~~~~----~~~---~~~~~~~~~~~~~~~~~~~~~~~~~Dvi~~~~~~~~~~--~~~~~~~~~~i~~ 121 (392)
T cd03805 52 -GTLPVRVRGDWLPRSI----FGR---FHILCAYLRMLYLALYLLLLPDEKYDVFIVDQVSACVP--LLKLFSPSKILFY 121 (392)
T ss_pred -CeeEEEEEeEEEcchh----hHh---HHHHHHHHHHHHHHHHHHhcccCCCCEEEEcCcchHHH--HHHHhcCCcEEEE
Confidence 0122222211000000 000 0011111111111111 12246899999986544332 2233334899999
Q ss_pred ecCCCccCCCCCchhhhhccccccccchhhHhHHhhhcCCEEEcCCHHHHhhccccccccccccccccccceeeeccCCC
Q 003962 413 AHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDV 492 (783)
Q Consensus 413 ~H~l~~~~~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~~~~~~~~v~qy~~~~~f~~p~l~~v~~gi~~ 492 (783)
.|........... .++.+ ++. .....+..+++.+|.|+++|....+.+.+..+ ...
T Consensus 122 ~h~~~~~~~~~~~-~~~~~---~~~-~~~~~e~~~~~~ad~ii~~s~~~~~~~~~~~~------------------~~~- 177 (392)
T cd03805 122 CHFPDQLLAQRGS-LLKRL---YRK-PFDWLEEFTTGMADKIVVNSNFTASVFKKTFP------------------SLA- 177 (392)
T ss_pred EecChHHhcCCCc-HHHHH---HHH-HHHHHHHHHhhCceEEEEcChhHHHHHHHHhc------------------ccc-
Confidence 9942211000000 01111 110 01124667899999999999876653332211 111
Q ss_pred CCCcEEEecCCccCCCCCCCchHHHhhccCchhhHHhhcChhhhhhhhccccCCCCcEEEEEecccCCCCHHHHHHHHHH
Q 003962 493 FDPKFNIVSPGADMSIYFPYTEEKRRLKSFHPEIEELLYSDVENKEHLCVLKDRNKPILFTMARLDRVKNLTGLVEWYGK 572 (783)
Q Consensus 493 ~~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~~~~~l~~~~~~~~~~gll~~~~k~iIl~vGRL~~~Kgl~~LieA~~~ 572 (783)
..++.+|+||+|.+.|.|....... +..+. .+++++|+++||+.+.||++.+++|+.+
T Consensus 178 -~~~~~vi~n~vd~~~~~~~~~~~~~-------------------~~~~~--~~~~~~i~~~grl~~~Kg~~~ll~a~~~ 235 (392)
T cd03805 178 -KNPREVVYPCVDTDSFESTSEDPDP-------------------GLLIP--KSGKKTFLSINRFERKKNIALAIEAFAI 235 (392)
T ss_pred -cCCcceeCCCcCHHHcCcccccccc-------------------ccccc--CCCceEEEEEeeecccCChHHHHHHHHH
Confidence 2344699999999888664332110 11122 4667899999999999999999999999
Q ss_pred hHccC---CCeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHH-cCCCCcEEEccCCCCcCChHHHHHHHHccCcEEEeCC
Q 003962 573 NAKLR---ELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQ-YKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPA 648 (783)
Q Consensus 573 l~~~~---~~~~LvIVG~g~~~~~~~~ee~~~~~~l~~li~~-~~L~~~V~flG~~~~~~~~~el~~~ia~aadvfV~PS 648 (783)
+.+.. ++++|+++|+++.. ..++..+.+++++++++ +++.++|.|+| .++.+++..+++. +|++++||
T Consensus 236 l~~~~~~~~~~~l~i~G~~~~~---~~~~~~~~~~l~~~~~~~~~l~~~V~f~g----~~~~~~~~~~l~~-ad~~l~~s 307 (392)
T cd03805 236 LKDKLAEFKNVRLVIAGGYDPR---VAENVEYLEELQRLAEELLLLEDQVIFLP----SISDSQKELLLSS-ARALLYTP 307 (392)
T ss_pred HHhhcccccCeEEEEEcCCCCC---CchhHHHHHHHHHHHHHhcCCCceEEEeC----CCChHHHHHHHhh-CeEEEECC
Confidence 98876 79999999998652 12233556788899999 99999999999 7778899999985 99999999
Q ss_pred CCCCCcHHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHh
Q 003962 649 LYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEEK 728 (783)
Q Consensus 649 ~~E~fGltvlEAMa~GlPVVat~~GG~~EiI~dg~~G~li~p~d~e~lAeaI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ 728 (783)
..|+||++++|||+||+|||+|+.||..|+|.++.+|+++++ |+++++++|.+++ +|++.+++|+++|++++.++
T Consensus 308 ~~E~~g~~~lEAma~G~PvI~s~~~~~~e~i~~~~~g~~~~~-~~~~~a~~i~~l~----~~~~~~~~~~~~a~~~~~~~ 382 (392)
T cd03805 308 SNEHFGIVPLEAMYAGKPVIACNSGGPLETVVDGETGFLCEP-TPEEFAEAMLKLA----NDPDLADRMGAAGRKRVKEK 382 (392)
T ss_pred CcCCCCchHHHHHHcCCCEEEECCCCcHHHhccCCceEEeCC-CHHHHHHHHHHHH----hChHHHHHHHHHHHHHHHHh
Confidence 999999999999999999999999999999999999999976 8999999996665 89999999999999999999
Q ss_pred CCHHHHHHHH
Q 003962 729 YTWKIYSQRL 738 (783)
Q Consensus 729 ysw~~~a~~l 738 (783)
|||+.+++++
T Consensus 383 ~s~~~~~~~~ 392 (392)
T cd03805 383 FSTEAFAERL 392 (392)
T ss_pred cCHHHHhhhC
Confidence 9999998864
No 25
>TIGR03088 stp2 sugar transferase, PEP-CTERM/EpsH1 system associated. Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate.
Probab=100.00 E-value=2.3e-36 Score=335.17 Aligned_cols=365 Identities=17% Similarity=0.198 Sum_probs=261.0
Q ss_pred eEEEEcccccccccCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHHCCCceeeceeEEeCCCCCCCCCcccceeeeecCc
Q 003962 256 NVVILTPHGYFAQDDVLGYPDTGGQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRLLPDAVGTTCGQRLEKVYGT 335 (783)
Q Consensus 256 rI~iis~h~~~~~~~~lg~p~tGG~~vyv~d~araL~~eLa~~L~~~GheV~~~i~VvT~~~~~~~g~~~~~~~e~i~~~ 335 (783)
||+.+.++. +.||.+.++. +|++.|.+.|+++. |++....+ ...... ..
T Consensus 3 ~il~ii~~~-----------~~GG~e~~~~--------~l~~~l~~~~~~~~----v~~~~~~~----~~~~~~----~~ 51 (374)
T TIGR03088 3 LIVHVVYRF-----------DVGGLENGLV--------NLINHLPADRYRHA----VVALTEVS----AFRKRI----QR 51 (374)
T ss_pred eEEEEeCCC-----------CCCcHHHHHH--------HHHhhccccccceE----EEEcCCCC----hhHHHH----Hh
Confidence 677776544 3599999999 66666788999988 77642211 111111 11
Q ss_pred cCeEEEEeccCCCccccccccccccchhhHHHHHHHHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHhcCCcE-EEEec
Q 003962 336 KYSDILRVPFRTEKGVVRKWISRFEVWPYLETYTEDVAVEIAKELQGKPDLIIGNYSDGNIVASLLAHKLGVTQ-CTIAH 414 (783)
Q Consensus 336 ~~v~Ilrvp~~~~~~~~~~~isr~~i~~~l~~f~~~~~~~l~~~l~~~pDIIh~h~~~~~lva~llar~lgvp~-v~t~H 414 (783)
.++.+++++.... ..+ .+...+.+.+.+ .+|||||+|...+ ..+.++++..++|. +.+.|
T Consensus 52 ~~i~~~~~~~~~~-----------~~~----~~~~~l~~~l~~---~~~Divh~~~~~~-~~~~~~~~~~~~~~~i~~~h 112 (374)
T TIGR03088 52 PDVAFYALHKQPG-----------KDV----AVYPQLYRLLRQ---LRPDIVHTRNLAA-LEAQLPAALAGVPARIHGEH 112 (374)
T ss_pred cCceEEEeCCCCC-----------CCh----HHHHHHHHHHHH---hCCCEEEEcchhH-HHHHHHHHhcCCCeEEEeec
Confidence 2566776654321 011 111222233332 4799999997543 44455666778775 44555
Q ss_pred CCCccCCCCCchhhhhccccccccchhhHhHHhhhcCCEEEcCCHHHHhhccccccccccccccccccceeeeccCCCCC
Q 003962 415 ALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFD 494 (783)
Q Consensus 415 ~l~~~~~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~~~~~~~~v~qy~~~~~f~~p~l~~v~~gi~~~~ 494 (783)
+....... ...| .+. ...+...+.+|.+|++|....+.+.+.. ++. .
T Consensus 113 ~~~~~~~~--~~~~-----~~~-----~~~~~~~~~~~~~i~vs~~~~~~~~~~~-------------------~~~--~ 159 (374)
T TIGR03088 113 GRDVFDLD--GSNW-----KYR-----WLRRLYRPLIHHYVAVSRDLEDWLRGPV-------------------KVP--P 159 (374)
T ss_pred Ccccccch--hhHH-----HHH-----HHHHHHHhcCCeEEEeCHHHHHHHHHhc-------------------CCC--h
Confidence 43211100 0011 111 1223445678999999988766332221 222 6
Q ss_pred CcEEEecCCccCCCCCCCchHHHhhccCchhhHHhhcChhhhhhhhccccCCCCcEEEEEecccCCCCHHHHHHHHHHhH
Q 003962 495 PKFNIVSPGADMSIYFPYTEEKRRLKSFHPEIEELLYSDVENKEHLCVLKDRNKPILFTMARLDRVKNLTGLVEWYGKNA 574 (783)
Q Consensus 495 ~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~~~~~l~~~~~~~~~~gll~~~~k~iIl~vGRL~~~Kgl~~LieA~~~l~ 574 (783)
.++.+|+||+|.+.|.|........ ...... +.++++|+++||+++.||++.+++|+..+.
T Consensus 160 ~~~~vi~ngvd~~~~~~~~~~~~~~-----------------~~~~~~--~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~ 220 (374)
T TIGR03088 160 AKIHQIYNGVDTERFHPSRGDRSPI-----------------LPPDFF--ADESVVVGTVGRLQAVKDQPTLVRAFALLV 220 (374)
T ss_pred hhEEEeccCccccccCCCccchhhh-----------------hHhhcC--CCCCeEEEEEecCCcccCHHHHHHHHHHHH
Confidence 7899999999998887653221100 001111 456789999999999999999999999987
Q ss_pred ccCC----CeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHHcCCCCcEEEccCCCCcCChHHHHHHHHccCcEEEeCCCC
Q 003962 575 KLRE----LVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALY 650 (783)
Q Consensus 575 ~~~~----~~~LvIVG~g~~~~~~~~ee~~~~~~l~~li~~~~L~~~V~flG~~~~~~~~~el~~~ia~aadvfV~PS~~ 650 (783)
+..+ +++|+++|+|+. .+++++.++++++.+++.|+|.+ .++..+++. +|++|+||..
T Consensus 221 ~~~~~~~~~~~l~i~G~g~~-----------~~~~~~~~~~~~~~~~v~~~g~~------~~~~~~~~~-adi~v~pS~~ 282 (374)
T TIGR03088 221 RQLPEGAERLRLVIVGDGPA-----------RGACEQMVRAAGLAHLVWLPGER------DDVPALMQA-LDLFVLPSLA 282 (374)
T ss_pred HhCcccccceEEEEecCCch-----------HHHHHHHHHHcCCcceEEEcCCc------CCHHHHHHh-cCEEEecccc
Confidence 6654 789999999864 35778889999999999999943 467888885 9999999999
Q ss_pred CCCcHHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhCC
Q 003962 651 EAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEEKYT 730 (783)
Q Consensus 651 E~fGltvlEAMa~GlPVVat~~GG~~EiI~dg~~G~li~p~d~e~lAeaI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ys 730 (783)
|+||++++|||+||+|||+|+.||..|++.++.+|++++++|++++|++|.+++ +|++.+++++++|++++.++||
T Consensus 283 Eg~~~~~lEAma~G~Pvv~s~~~g~~e~i~~~~~g~~~~~~d~~~la~~i~~l~----~~~~~~~~~~~~a~~~~~~~fs 358 (374)
T TIGR03088 283 EGISNTILEAMASGLPVIATAVGGNPELVQHGVTGALVPPGDAVALARALQPYV----SDPAARRAHGAAGRARAEQQFS 358 (374)
T ss_pred ccCchHHHHHHHcCCCEEEcCCCCcHHHhcCCCceEEeCCCCHHHHHHHHHHHH----hCHHHHHHHHHHHHHHHHHhCC
Confidence 999999999999999999999999999999999999999999999999997665 7999999999999999999999
Q ss_pred HHHHHHHHHHHHHH
Q 003962 731 WKIYSQRLLTLTGV 744 (783)
Q Consensus 731 w~~~a~~ll~ly~~ 744 (783)
|+.+++++.++|+.
T Consensus 359 ~~~~~~~~~~~y~~ 372 (374)
T TIGR03088 359 INAMVAAYAGLYDQ 372 (374)
T ss_pred HHHHHHHHHHHHHH
Confidence 99999999999964
No 26
>KOG1111 consensus N-acetylglucosaminyltransferase complex, subunit PIG-A/SPT14, required for phosphatidylinositol biosynthesis/Sulfolipid synthase [Cell wall/membrane/envelope biogenesis; Posttranslational modification, protein turnover, chaperones; Lipid transport and metabolism]
Probab=100.00 E-value=1.2e-37 Score=326.45 Aligned_cols=372 Identities=17% Similarity=0.225 Sum_probs=282.7
Q ss_pred ceEEEEcccccccccCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHHCCCceeeceeEEeCCCCCCCCCcccceeeeecC
Q 003962 255 FNVVILTPHGYFAQDDVLGYPDTGGQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRLLPDAVGTTCGQRLEKVYG 334 (783)
Q Consensus 255 ~rI~iis~h~~~~~~~~lg~p~tGG~~vyv~d~araL~~eLa~~L~~~GheV~~~i~VvT~~~~~~~g~~~~~~~e~i~~ 334 (783)
++|+++|+|.| |.+||.+.++. .|++.|.+.||.|. ++|..+.+..|-++-
T Consensus 1 ~~i~mVsdff~---------P~~ggveshiy--------~lSq~li~lghkVv----vithayg~r~giryl-------- 51 (426)
T KOG1111|consen 1 SRILMVSDFFY---------PSTGGVESHIY--------ALSQCLIRLGHKVV----VITHAYGNRVGIRYL-------- 51 (426)
T ss_pred CcceeeCcccc---------cCCCChhhhHH--------HhhcchhhcCCeEE----EEeccccCccceeee--------
Confidence 57999999999 56899999999 88999999999999 999998776654322
Q ss_pred ccCeEEEEeccCCCccccccccccccchhhHHHHHHHHHHHHHHHcCCCceEEEEcCCCch--HHHHHHHHhcCCcEEEE
Q 003962 335 TKYSDILRVPFRTEKGVVRKWISRFEVWPYLETYTEDVAVEIAKELQGKPDLIIGNYSDGN--IVASLLAHKLGVTQCTI 412 (783)
Q Consensus 335 ~~~v~Ilrvp~~~~~~~~~~~isr~~i~~~l~~f~~~~~~~l~~~l~~~pDIIh~h~~~~~--lva~llar~lgvp~v~t 412 (783)
+.+.++..+|+... ++...+|-+...+.-....+++ ++..|||+|.+.+. --+.+.++.+|...|+|
T Consensus 52 t~glkVyylp~~v~--------~n~tT~ptv~~~~Pllr~i~lr---E~I~ivhghs~fS~lahe~l~hartMGlktVfT 120 (426)
T KOG1111|consen 52 TNGLKVYYLPAVVG--------YNQTTFPTVFSDFPLLRPILLR---ERIEIVHGHSPFSYLAHEALMHARTMGLKTVFT 120 (426)
T ss_pred cCCceEEEEeeeee--------ecccchhhhhccCcccchhhhh---hceEEEecCChHHHHHHHHHHHHHhcCceEEEe
Confidence 33578888877532 1112222221111111222232 37999999998874 46777889999999999
Q ss_pred ecCCCccCCCCCchhhhhccccccccchhhHhHHhhhcCCEEEcCCHHHHhhccccccccccccccccccceeeeccCCC
Q 003962 413 AHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDV 492 (783)
Q Consensus 413 ~H~l~~~~~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~~~~~~~~v~qy~~~~~f~~p~l~~v~~gi~~ 492 (783)
-|++.. ..+..-....... ...+...|.+||+|+...++ + .+...++
T Consensus 121 dHSlfG----fad~~si~~n~ll---------~~sL~~id~~IcVshtsken---t----------------vlr~~L~- 167 (426)
T KOG1111|consen 121 DHSLFG----FADIGSILTNKLL---------PLSLANIDRIICVSHTSKEN---T----------------VLRGALA- 167 (426)
T ss_pred cccccc----ccchhhhhhccee---------eeeecCCCcEEEEeecCCCc---e----------------EEEeccC-
Confidence 999633 2222221111111 13577999999999776552 1 1112333
Q ss_pred CCCcEEEecCCccCCCCCCCchHHHhhccCchhhHHhhcChhhhhhhhccccCCCCcEEEEEecccCCCCHHHHHHHHHH
Q 003962 493 FDPKFNIVSPGADMSIYFPYTEEKRRLKSFHPEIEELLYSDVENKEHLCVLKDRNKPILFTMARLDRVKNLTGLVEWYGK 572 (783)
Q Consensus 493 ~~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~~~~~l~~~~~~~~~~gll~~~~k~iIl~vGRL~~~Kgl~~LieA~~~ 572 (783)
+.|+.+|||.++.+.|.|...... ..+...|..++||...||++.|++++.+
T Consensus 168 -p~kvsvIPnAv~~~~f~P~~~~~~---------------------------S~~i~~ivv~sRLvyrKGiDll~~iIp~ 219 (426)
T KOG1111|consen 168 -PAKVSVIPNAVVTHTFTPDAADKP---------------------------SADIITIVVASRLVYRKGIDLLLEIIPS 219 (426)
T ss_pred -HhHeeeccceeeccccccCccccC---------------------------CCCeeEEEEEeeeeeccchHHHHHHHHH
Confidence 779999999999999999654310 2334679999999999999999999999
Q ss_pred hHccCCCeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHHcCCCCcEEEccCCCCcCChHHHHHHHHccCcEEEeCCCCCC
Q 003962 573 NAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEA 652 (783)
Q Consensus 573 l~~~~~~~~LvIVG~g~~~~~~~~ee~~~~~~l~~li~~~~L~~~V~flG~~~~~~~~~el~~~ia~aadvfV~PS~~E~ 652 (783)
+.+++|+++++|+|+||.+ ..+++..+++.++++|.++| .++.+++-+.+++ .|+|+.||+.|+
T Consensus 220 vc~~~p~vrfii~GDGPk~-----------i~lee~lEk~~l~~rV~~lG----~v~h~~Vr~vl~~-G~IFlntSlTEa 283 (426)
T KOG1111|consen 220 VCDKHPEVRFIIIGDGPKR-----------IDLEEMLEKLFLQDRVVMLG----TVPHDRVRDVLVR-GDIFLNTSLTEA 283 (426)
T ss_pred HHhcCCCeeEEEecCCccc-----------chHHHHHHHhhccCceEEec----ccchHHHHHHHhc-CcEEeccHHHHH
Confidence 9999999999999999873 46778888899999999999 7888999999996 999999999999
Q ss_pred CcHHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhCCHH
Q 003962 653 FGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEEKYTWK 732 (783)
Q Consensus 653 fGltvlEAMa~GlPVVat~~GG~~EiI~dg~~G~li~p~d~e~lAeaI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~ 732 (783)
||++++|||+||+|||+|+.||++|++.++ -.......++++++++.+.+.++...|. .-.+++.+-|+|+
T Consensus 284 fc~~ivEAaScGL~VVsTrVGGIpeVLP~d--~i~~~~~~~~dl~~~v~~ai~~~~~~p~-------~~h~~v~~~y~w~ 354 (426)
T KOG1111|consen 284 FCMVIVEAASCGLPVVSTRVGGIPEVLPED--MITLGEPGPDDLVGAVEKAITKLRTLPL-------EFHDRVKKMYSWK 354 (426)
T ss_pred HHHHHHHHHhCCCEEEEeecCCccccCCcc--ceeccCCChHHHHHHHHHHHHHhccCch-------hHHHHHHHhccHH
Confidence 999999999999999999999999999664 2324445799999999998877777644 3456777889999
Q ss_pred HHHHHHHHHHHHhcchhhhcchhHH
Q 003962 733 IYSQRLLTLTGVYGFWKHVSNLDRL 757 (783)
Q Consensus 733 ~~a~~ll~ly~~~~~w~~~~~~~~~ 757 (783)
..+++.+.+| |+.++...+.
T Consensus 355 dVa~rTekvy-----~r~~~t~~~~ 374 (426)
T KOG1111|consen 355 DVAERTEKVY-----DRAATTSIRN 374 (426)
T ss_pred HHHHHHHHHH-----HHHhhccCcC
Confidence 9999999995 5555544333
No 27
>cd05844 GT1_like_7 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center
Probab=100.00 E-value=3.3e-36 Score=331.23 Aligned_cols=280 Identities=21% Similarity=0.307 Sum_probs=230.2
Q ss_pred CCceEEEEcCCCchHHHHHHHHhcCCcEEEEecCCCccCCCCCchhhhhccccccccchhhHhHHhhhcCCEEEcCCHHH
Q 003962 382 GKPDLIIGNYSDGNIVASLLAHKLGVTQCTIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTFQE 461 (783)
Q Consensus 382 ~~pDIIh~h~~~~~lva~llar~lgvp~v~t~H~l~~~~~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~ 461 (783)
.+||+||+|....+..+..++++.|+|++++.|+........ +..... +. .....+...++.+|.|+++|+..
T Consensus 81 ~~~dvvh~~~~~~~~~~~~~~~~~~~p~i~~~h~~~~~~~~~----~~~~~~-~~--~~~~~~~~~~~~~d~ii~~s~~~ 153 (367)
T cd05844 81 HRPDLVHAHFGFDGVYALPLARRLGVPLVVTFHGFDATTSLA----LLLRSR-WA--LYARRRRRLARRAALFIAVSQFI 153 (367)
T ss_pred hCCCEEEeccCchHHHHHHHHHHcCCCEEEEEeCccccccch----hhcccc-hh--HHHHHHHHHHHhcCEEEECCHHH
Confidence 479999999877777888888999999999999754322111 100000 10 11123445678999999999887
Q ss_pred HhhccccccccccccccccccceeeeccCCCCCCcEEEecCCccCCCCCCCchHHHhhccCchhhHHhhcChhhhhhhhc
Q 003962 462 IAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEEKRRLKSFHPEIEELLYSDVENKEHLC 541 (783)
Q Consensus 462 ~~~~~~~v~qy~~~~~f~~p~l~~v~~gi~~~~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~~~~~l~~~~~~~~~~g 541 (783)
.+.+.+. |++ .+++.++|||+|.+.|.|...
T Consensus 154 ~~~~~~~--------------------~~~--~~~i~vi~~g~d~~~~~~~~~--------------------------- 184 (367)
T cd05844 154 RDRLLAL--------------------GFP--PEKVHVHPIGVDTAKFTPATP--------------------------- 184 (367)
T ss_pred HHHHHHc--------------------CCC--HHHeEEecCCCCHHhcCCCCC---------------------------
Confidence 6632221 333 678999999999887755321
Q ss_pred cccCCCCcEEEEEecccCCCCHHHHHHHHHHhHccCCCeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHHcCCCCcEEEc
Q 003962 542 VLKDRNKPILFTMARLDRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLNGQFRWI 621 (783)
Q Consensus 542 ll~~~~k~iIl~vGRL~~~Kgl~~LieA~~~l~~~~~~~~LvIVG~g~~~~~~~~ee~~~~~~l~~li~~~~L~~~V~fl 621 (783)
..+++.++++|++.+.||++.+++|+..+.+..++++|+|+|+|+. .++++++++++++.++|+|+
T Consensus 185 ---~~~~~~i~~~G~~~~~K~~~~li~a~~~l~~~~~~~~l~ivG~g~~-----------~~~~~~~~~~~~~~~~v~~~ 250 (367)
T cd05844 185 ---ARRPPRILFVGRFVEKKGPLLLLEAFARLARRVPEVRLVIIGDGPL-----------LAALEALARALGLGGRVTFL 250 (367)
T ss_pred ---CCCCcEEEEEEeeccccChHHHHHHHHHHHHhCCCeEEEEEeCchH-----------HHHHHHHHHHcCCCCeEEEC
Confidence 3456789999999999999999999999988889999999998843 46788889999999999999
Q ss_pred cCCCCcCChHHHHHHHHccCcEEEeCCC------CCCCcHHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHHH
Q 003962 622 SSQMNRVRNGELYRYICDTKGAFVQPAL------YEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQ 695 (783)
Q Consensus 622 G~~~~~~~~~el~~~ia~aadvfV~PS~------~E~fGltvlEAMa~GlPVVat~~GG~~EiI~dg~~G~li~p~d~e~ 695 (783)
| .++.+++..+++. +|++|+||. .|+||++++|||+||+|||+|+.||..|++.++.+|+++++.|+++
T Consensus 251 g----~~~~~~l~~~~~~-ad~~v~ps~~~~~~~~E~~~~~~~EA~a~G~PvI~s~~~~~~e~i~~~~~g~~~~~~d~~~ 325 (367)
T cd05844 251 G----AQPHAEVRELMRR-ARIFLQPSVTAPSGDAEGLPVVLLEAQASGVPVVATRHGGIPEAVEDGETGLLVPEGDVAA 325 (367)
T ss_pred C----CCCHHHHHHHHHh-CCEEEECcccCCCCCccCCchHHHHHHHcCCCEEEeCCCCchhheecCCeeEEECCCCHHH
Confidence 9 7778999999995 999999997 5999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHH
Q 003962 696 AAEILVDFFEKCKADPSYWDKISLGGLKRIEEKYTWKIYSQRLLT 740 (783)
Q Consensus 696 lAeaI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~~~a~~ll~ 740 (783)
++++|.+++ +|++.+++|++++++.+.++|||+.+++++.+
T Consensus 326 l~~~i~~l~----~~~~~~~~~~~~a~~~~~~~~s~~~~~~~l~~ 366 (367)
T cd05844 326 LAAALGRLL----ADPDLRARMGAAGRRRVEERFDLRRQTAKLEA 366 (367)
T ss_pred HHHHHHHHH----cCHHHHHHHHHHHHHHHHHHCCHHHHHHHHhc
Confidence 999997665 89999999999999999999999999999875
No 28
>cd04955 GT1_like_6 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=100.00 E-value=1.8e-35 Score=323.84 Aligned_cols=361 Identities=17% Similarity=0.201 Sum_probs=255.0
Q ss_pred eEEEEcccccccccCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHHCCCceeeceeEEeCCCCCCCCCcccceeeeecCc
Q 003962 256 NVVILTPHGYFAQDDVLGYPDTGGQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRLLPDAVGTTCGQRLEKVYGT 335 (783)
Q Consensus 256 rI~iis~h~~~~~~~~lg~p~tGG~~vyv~d~araL~~eLa~~L~~~GheV~~~i~VvT~~~~~~~g~~~~~~~e~i~~~ 335 (783)
||+|++.+++| |..||.+.++. +|++.|.++||+|+ |+|........ ....
T Consensus 1 ~i~~i~~~~~~--------~~~gG~~~~~~--------~la~~L~~~g~~v~----v~~~~~~~~~~---------~~~~ 51 (363)
T cd04955 1 KIAIIGTRGIP--------AKYGGFETFVE--------ELAPRLVARGHEVT----VYCRSPYPKQK---------ETEY 51 (363)
T ss_pred CeEEEecCcCC--------cccCcHHHHHH--------HHHHHHHhcCCCEE----EEEccCCCCCc---------cccc
Confidence 69999999885 35799999999 77777899999999 98875432210 1122
Q ss_pred cCeEEEEeccCCCccccccccccccchhhHHHHHHHHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHhcCCcEEEEecC
Q 003962 336 KYSDILRVPFRTEKGVVRKWISRFEVWPYLETYTEDVAVEIAKELQGKPDLIIGNYSDGNIVASLLAHKLGVTQCTIAHA 415 (783)
Q Consensus 336 ~~v~Ilrvp~~~~~~~~~~~isr~~i~~~l~~f~~~~~~~l~~~l~~~pDIIh~h~~~~~lva~llar~lgvp~v~t~H~ 415 (783)
.+++++++|.....+. ..+.+ .+ ......+. .+.++|+||...+.. ..+..++++.++|++++.|+
T Consensus 52 ~~i~~~~~~~~~~~~~--------~~~~~--~~-~~~~~~~~--~~~~~~~i~~~~~~~-~~~~~~~~~~~~~~v~~~h~ 117 (363)
T cd04955 52 NGVRLIHIPAPEIGGL--------GTIIY--DI-LAILHALF--VKRDIDHVHALGPAI-APFLPLLRLKGKKVVVNMDG 117 (363)
T ss_pred CCceEEEcCCCCccch--------hhhHH--HH-HHHHHHHh--ccCCeEEEEecCccH-HHHHHHHHhcCCCEEEEccC
Confidence 4677887776431110 00000 00 01111111 134567777655544 34444555669999999998
Q ss_pred CCccCCCCCchhhhhccccccccchhhHhHHhhhcCCEEEcCCHHHHhhccccccccccccccccccceeeeccCCCCCC
Q 003962 416 LEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDP 495 (783)
Q Consensus 416 l~~~~~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~~~~~~~~v~qy~~~~~f~~p~l~~v~~gi~~~~~ 495 (783)
..... ..|...... + ....+..+++.+|.|+++|+...+.+++. | |. +
T Consensus 118 ~~~~~-----~~~~~~~~~--~--~~~~~~~~~~~ad~ii~~s~~~~~~~~~~---~----------------~~----~ 165 (363)
T cd04955 118 LEWKR-----AKWGRPAKR--Y--LKFGEKLAVKFADRLIADSPGIKEYLKEK---Y----------------GR----D 165 (363)
T ss_pred cceee-----cccccchhH--H--HHHHHHHHHhhccEEEeCCHHHHHHHHHh---c----------------CC----C
Confidence 64321 112111111 0 11235667889999999998877643221 1 11 2
Q ss_pred cEEEecCCccCCCCCCCchHHHhhccCchhhHHhhcChhhhhhhhccccCCCCcEEEEEecccCCCCHHHHHHHHHHhHc
Q 003962 496 KFNIVSPGADMSIYFPYTEEKRRLKSFHPEIEELLYSDVENKEHLCVLKDRNKPILFTMARLDRVKNLTGLVEWYGKNAK 575 (783)
Q Consensus 496 k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~~~~~l~~~~~~~~~~gll~~~~k~iIl~vGRL~~~Kgl~~LieA~~~l~~ 575 (783)
+ .+||||+|...+.+.... .+..+. .+++.++++||+.+.||++.+++|+.++.+
T Consensus 166 ~-~~i~ngv~~~~~~~~~~~---------------------~~~~~~---~~~~~i~~~G~~~~~Kg~~~li~a~~~l~~ 220 (363)
T cd04955 166 S-TYIPYGADHVVSSEEDEI---------------------LKKYGL---EPGRYYLLVGRIVPENNIDDLIEAFSKSNS 220 (363)
T ss_pred C-eeeCCCcChhhcchhhhh---------------------HHhcCC---CCCcEEEEEecccccCCHHHHHHHHHhhcc
Confidence 2 899999998766541110 112332 234578899999999999999999998754
Q ss_pred cCCCeEEEEEeCCCCCCCccHHHHHHHHHHHHHHH-HcCCCCcEEEccCCCCcCChHHHHHHHHccCcEEEeCCCC-CCC
Q 003962 576 LRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLID-QYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALY-EAF 653 (783)
Q Consensus 576 ~~~~~~LvIVG~g~~~~~~~~ee~~~~~~l~~li~-~~~L~~~V~flG~~~~~~~~~el~~~ia~aadvfV~PS~~-E~f 653 (783)
+++|+++|+++.. ..+.+.+. .+++.++|+|+| .++.+++..+++. +|++++||.. |+|
T Consensus 221 ---~~~l~ivG~~~~~-----------~~~~~~~~~~~~~~~~V~~~g----~~~~~~~~~~~~~-ad~~v~ps~~~e~~ 281 (363)
T cd04955 221 ---GKKLVIVGNADHN-----------TPYGKLLKEKAAADPRIIFVG----PIYDQELLELLRY-AALFYLHGHSVGGT 281 (363)
T ss_pred ---CceEEEEcCCCCc-----------chHHHHHHHHhCCCCcEEEcc----ccChHHHHHHHHh-CCEEEeCCccCCCC
Confidence 7999999998642 12233333 667789999999 7778899999996 9999999998 999
Q ss_pred cHHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhCCHHH
Q 003962 654 GLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEEKYTWKI 733 (783)
Q Consensus 654 GltvlEAMa~GlPVVat~~GG~~EiI~dg~~G~li~p~d~e~lAeaI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~~ 733 (783)
|++++|||+||+|||+|+.|+..|++.+ +|++++++|. ++++|..++ +|++.+.++++++++.+.++|||+.
T Consensus 282 ~~~~~EAma~G~PvI~s~~~~~~e~~~~--~g~~~~~~~~--l~~~i~~l~----~~~~~~~~~~~~~~~~~~~~fs~~~ 353 (363)
T cd04955 282 NPSLLEAMAYGCPVLASDNPFNREVLGD--KAIYFKVGDD--LASLLEELE----ADPEEVSAMAKAARERIREKYTWEK 353 (363)
T ss_pred ChHHHHHHHcCCCEEEecCCccceeecC--CeeEecCchH--HHHHHHHHH----hCHHHHHHHHHHHHHHHHHhCCHHH
Confidence 9999999999999999999999999966 7999988775 888886555 8999999999999999988999999
Q ss_pred HHHHHHHHHH
Q 003962 734 YSQRLLTLTG 743 (783)
Q Consensus 734 ~a~~ll~ly~ 743 (783)
++++++++|+
T Consensus 354 ~~~~~~~~y~ 363 (363)
T cd04955 354 IADQYEELYK 363 (363)
T ss_pred HHHHHHHHhC
Confidence 9999999874
No 29
>PRK15179 Vi polysaccharide biosynthesis protein TviE; Provisional
Probab=100.00 E-value=6.2e-36 Score=352.34 Aligned_cols=458 Identities=13% Similarity=0.140 Sum_probs=290.9
Q ss_pred hHHHHHHHHHHHHHhhcCCCCCCchHH-------HHHhhhcCcccCCCCcHHHHHHHHHHHHHhhcCCChhcHHHHhccC
Q 003962 179 LNSLQHVLRKAEEYLTTVVPETPFSEL-------ALRFQEIGLERGWGDTAERALEMIQLLLDLLEAPDPCTLETFLGRI 251 (783)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~p~~~~~~~f~~~~ 251 (783)
.++=..++++|.+..+.=. .-|.+. ...+|.+|=|.-=-++.-|+.-+-+++...-+-- +...++. .
T Consensus 204 ~~~A~~~~~~a~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~---~ 277 (694)
T PRK15179 204 LWRARDVLQAGLDAIGDGA--RKLTRRLVDLNADLAALRRLGVEGDGRDVPVSILVLEKMLQEIGRRR-NAEYDAG---P 277 (694)
T ss_pred HHHHHHHHHHHHHhhCcch--HHHHHHHHHHHHHHHHHHHcCcccccCCCceeeeeHHHHHHHHhhcC-cccccCC---C
Confidence 3444455666655544322 122222 2346777777666667778877777776653211 1111110 0
Q ss_pred CCcc-eEEEEcccccccccCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHHCCC------------ceeeceeEEeCCCC
Q 003962 252 PMVF-NVVILTPHGYFAQDDVLGYPDTGGQVVYILDQVRALEDEMLLRIKQQGL------------DITPQILIITRLLP 318 (783)
Q Consensus 252 pm~~-rI~iis~h~~~~~~~~lg~p~tGG~~vyv~d~araL~~eLa~~L~~~Gh------------eV~~~i~VvT~~~~ 318 (783)
-.+. ||+++.+.. ..||.+.++++++ ..|.++|. ++. |++++..
T Consensus 278 ~~~~~rIl~vi~sl-----------~~GGAEr~~~~La--------~~l~~~~~~~~~~~g~g~~~~~~--V~~~~~~-- 334 (694)
T PRK15179 278 ESFVGPVLMINGSL-----------GAGGAERQFVNTA--------VALQSAIQQGQSIAGYGVLGPVQ--VVCRSLR-- 334 (694)
T ss_pred CCCcceEEEEeCCC-----------CCCcHHHHHHHHH--------HHHHhcccCcccccCccCCCCcE--EEEEecc--
Confidence 1234 888886544 3599999999544 45567643 233 2244321
Q ss_pred CCCCC-cccceeeeecCccCeEEEEeccCCCccccc--ccccc-----ccchhhHHHHHHHHHHHHHHHcCCCceEEEEc
Q 003962 319 DAVGT-TCGQRLEKVYGTKYSDILRVPFRTEKGVVR--KWISR-----FEVWPYLETYTEDVAVEIAKELQGKPDLIIGN 390 (783)
Q Consensus 319 ~~~g~-~~~~~~e~i~~~~~v~Ilrvp~~~~~~~~~--~~isr-----~~i~~~l~~f~~~~~~~l~~~l~~~pDIIh~h 390 (783)
...|+ .+...+. ..++.+..++..+..+... .+... ..+.......... +.++++. .+|||||+|
T Consensus 335 ~~~g~~~~~~~L~----~~Gv~v~~l~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~-L~~~lk~--~kpDIVH~h 407 (694)
T PRK15179 335 SREGADFFAATLA----DAGIPVSVYSDMQAWGGCEFSSLLAPYREYLRFLPKQIIEGTTK-LTDVMRS--SVPSVVHIW 407 (694)
T ss_pred cccCcchHHHHHH----hCCCeEEEeccCCccCcccccccchhhHHHhhhcchhHHHHHHH-HHHHHHH--cCCcEEEEe
Confidence 11111 1111111 1345666655443211100 00000 0000011111222 2233332 479999999
Q ss_pred CCCchHHHHHHHHhcCCcEEE-EecCCCccCCCCCchhhhhccccccccchhhHhHHhhhcCCEEEcCCHHHHhhccccc
Q 003962 391 YSDGNIVASLLAHKLGVTQCT-IAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTFQEIAGSKDTV 469 (783)
Q Consensus 391 ~~~~~lva~llar~lgvp~v~-t~H~l~~~~~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~~~~~~~~v 469 (783)
.+.+++++.++++..++|+|+ +.|++...... . .|+. .|. .....+....++.+|++|....+.+.+.
T Consensus 408 ~~~a~~lg~lAa~~~gvPvIv~t~h~~~~~~~~--~-~~~~---~~~----~l~~~l~~~~~~i~Vs~S~~~~~~l~~~- 476 (694)
T PRK15179 408 QDGSIFACALAALLAGVPRIVLSVRTMPPVDRP--D-RYRV---EYD----IIYSELLKMRGVALSSNSQFAAHRYADW- 476 (694)
T ss_pred CCcHHHHHHHHHHHcCCCEEEEEeCCCccccch--h-HHHH---HHH----HHHHHHHhcCCeEEEeCcHHHHHHHHHH-
Confidence 998888899999989999876 56765321111 0 1110 011 0111122234456677776554422111
Q ss_pred cccccccccccccceeeeccCCCCCCcEEEecCCccCCCCCCCchHHHhhccCchhhHHhhcChhhhhhhhccccCCCCc
Q 003962 470 GQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEEKRRLKSFHPEIEELLYSDVENKEHLCVLKDRNKP 549 (783)
Q Consensus 470 ~qy~~~~~f~~p~l~~v~~gi~~~~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~~~~~l~~~~~~~~~~gll~~~~k~ 549 (783)
.|++ ..|+.|||||+|.+.|.+........ ..+....+.+.+
T Consensus 477 ------------------~g~~--~~kI~VI~NGVd~~~f~~~~~~~~~~------------------~~~~~~~~~~~~ 518 (694)
T PRK15179 477 ------------------LGVD--ERRIPVVYNGLAPLKSVQDDACTAMM------------------AQFDARTSDARF 518 (694)
T ss_pred ------------------cCCC--hhHEEEECCCcCHHhcCCCchhhHHH------------------HhhccccCCCCe
Confidence 1333 67999999999988776533221110 011111134567
Q ss_pred EEEEEecccCCCCHHHHHHHHHHhHccCCCeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHHcCCCCcEEEccCCCCcCC
Q 003962 550 ILFTMARLDRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVR 629 (783)
Q Consensus 550 iIl~vGRL~~~Kgl~~LieA~~~l~~~~~~~~LvIVG~g~~~~~~~~ee~~~~~~l~~li~~~~L~~~V~flG~~~~~~~ 629 (783)
+|+++||+++.||++.+++|+.++.+..|+++|+|+|+|+. .++++++++++++.++|.|+|++.
T Consensus 519 vIg~VGRL~~~KG~~~LI~A~a~l~~~~p~~~LvIvG~G~~-----------~~~L~~l~~~lgL~~~V~flG~~~---- 583 (694)
T PRK15179 519 TVGTVMRVDDNKRPFLWVEAAQRFAASHPKVRFIMVGGGPL-----------LESVREFAQRLGMGERILFTGLSR---- 583 (694)
T ss_pred EEEEEEeCCccCCHHHHHHHHHHHHHHCcCeEEEEEccCcc-----------hHHHHHHHHHcCCCCcEEEcCCcc----
Confidence 89999999999999999999999988889999999999964 367889999999999999999543
Q ss_pred hHHHHHHHHccCcEEEeCCCCCCCcHHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCH--HHHHHHHHHHHHHh
Q 003962 630 NGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHG--EQAAEILVDFFEKC 707 (783)
Q Consensus 630 ~~el~~~ia~aadvfV~PS~~E~fGltvlEAMa~GlPVVat~~GG~~EiI~dg~~G~li~p~d~--e~lAeaI~~~l~~l 707 (783)
++..+++ ++|+||+||.+|+||++++|||+||+|||+|+.||+.|+|.++.+|++++|+|. ++++++|.+++..+
T Consensus 584 --dv~~ll~-aaDv~VlpS~~Egfp~vlLEAMA~G~PVVat~~gG~~EiV~dg~~GlLv~~~d~~~~~La~aL~~ll~~l 660 (694)
T PRK15179 584 --RVGYWLT-QFNAFLLLSRFEGLPNVLIEAQFSGVPVVTTLAGGAGEAVQEGVTGLTLPADTVTAPDVAEALARIHDMC 660 (694)
T ss_pred --hHHHHHH-hcCEEEeccccccchHHHHHHHHcCCeEEEECCCChHHHccCCCCEEEeCCCCCChHHHHHHHHHHHhCh
Confidence 5677777 499999999999999999999999999999999999999999999999998874 68999998877544
Q ss_pred hCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Q 003962 708 KADPSYWDKISLGGLKRIEEKYTWKIYSQRLLTLTG 743 (783)
Q Consensus 708 ~~dp~~~~~ms~~a~~~v~~~ysw~~~a~~ll~ly~ 743 (783)
..++ .+++++++++.++|||+.++++++++|+
T Consensus 661 ~~~~----~l~~~ar~~a~~~FS~~~~~~~~~~lY~ 692 (694)
T PRK15179 661 AADP----GIARKAADWASARFSLNQMIASTVRCYQ 692 (694)
T ss_pred hccH----HHHHHHHHHHHHhCCHHHHHHHHHHHhC
Confidence 4444 5678899999899999999999999995
No 30
>PRK15490 Vi polysaccharide biosynthesis protein TviE; Provisional
Probab=100.00 E-value=2.4e-35 Score=333.64 Aligned_cols=398 Identities=15% Similarity=0.132 Sum_probs=269.3
Q ss_pred CCCCCCcchhhHHHHHHHHHHHHHHHHHHCCCceeeceeEEeCCCCCCCCCcccceeeeecCccCeEEEEeccCCCcc--
Q 003962 273 GYPDTGGQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRLLPDAVGTTCGQRLEKVYGTKYSDILRVPFRTEKG-- 350 (783)
Q Consensus 273 g~p~tGG~~vyv~d~araL~~eLa~~L~~~GheV~~~i~VvT~~~~~~~g~~~~~~~e~i~~~~~v~Ilrvp~~~~~~-- 350 (783)
|.-..||.+..+..+|-++++...+.=+-.|+.|.-.|.++|+......|..+....-.-.+.+...+-+++..-+..
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (578)
T PRK15490 169 GSLGSGGAERQISRLAIEIARKYRQKGKIGGLKVEEPVELIIRSLTPELRQDFFLKEVLEEQVEVLEIAKITGNLFDDAT 248 (578)
T ss_pred cCCCCCchHHHHHHHHHHHHHHHHhcccccccccccceeEEEeecCcccCcchhHHHHHhcCCceEEeeccchhhhhhcc
Confidence 334579999999988776655544444445777777777999987766665443221111333334454554221111
Q ss_pred ----ccccccccccchhhHHHHHHHHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHhcCCcEEEE-ecCCCccCCCCCc
Q 003962 351 ----VVRKWISRFEVWPYLETYTEDVAVEIAKELQGKPDLIIGNYSDGNIVASLLAHKLGVTQCTI-AHALEKTKYPDSD 425 (783)
Q Consensus 351 ----~~~~~isr~~i~~~l~~f~~~~~~~l~~~l~~~pDIIh~h~~~~~lva~llar~lgvp~v~t-~H~l~~~~~~~s~ 425 (783)
.++.+++. ..|. ..+-...+..+++ ..+|||||+|...++..+.++++..|+|++++ .|+..... ...
T Consensus 249 ~~~~~~~~~~~~--~~~~-~~~~~~~l~~~ir--~~rpDIVHt~~~~a~l~g~laA~lagvpviv~~~h~~~~~~--~~r 321 (578)
T PRK15490 249 IESPELRLLLSH--LPPV-CKYGIKHLVPHLC--ERKLDYLSVWQDGACLMIALAALIAGVPRIQLGLRGLPPVV--RKR 321 (578)
T ss_pred ccchHHHHHHhc--CChH-HHHHHHHHHHHHH--HcCCCEEEEcCcccHHHHHHHHHhcCCCEEEEeecccCCcc--hhh
Confidence 01111110 0000 1111122222333 25899999999888888999999999999654 66521110 000
Q ss_pred hhhhhccccccccchhhHhHHhhhcCCEEEcCCHHHHhhccccccccccccccccccceeeeccCCCCCCcEEEecCCcc
Q 003962 426 IYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGAD 505 (783)
Q Consensus 426 ~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~~~~~~~~v~qy~~~~~f~~p~l~~v~~gi~~~~~k~~VIpnGvD 505 (783)
.+...+.... ........+| +++.|....+.+.+. .+++ +.|+.|||||+|
T Consensus 322 ----~~~~e~~~~~---~a~~i~~~sd-~v~~s~~v~~~l~~~-------------------lgip--~~KI~VIyNGVD 372 (578)
T PRK15490 322 ----LFKPEYEPLY---QALAVVPGVD-FMSNNHCVTRHYADW-------------------LKLE--AKHFQVVYNGVL 372 (578)
T ss_pred ----HHHHHHHHhh---hhceeEecch-hhhccHHHHHHHHHH-------------------hCCC--HHHEEEEeCCcc
Confidence 0001110000 0001133344 445554443321111 1333 779999999999
Q ss_pred CCCCCCCchHHHhhccCchhhHHhhcChhhhhh--hhccccCCCCcEEEEEecccCCCCHHHHHHHHHHhHccCCCeEEE
Q 003962 506 MSIYFPYTEEKRRLKSFHPEIEELLYSDVENKE--HLCVLKDRNKPILFTMARLDRVKNLTGLVEWYGKNAKLRELVNLV 583 (783)
Q Consensus 506 ~~~f~p~~~~~~r~~~~~~~~~~~l~~~~~~~~--~~gll~~~~k~iIl~vGRL~~~Kgl~~LieA~~~l~~~~~~~~Lv 583 (783)
...|.|....... .++ ..++ +++.++|+++||+.+.||...+++++.++.+..|+++|+
T Consensus 373 ~~rf~p~~~~~~~-----------------~r~~~~~~l--~~~~~vIg~VgRl~~~Kg~~~LI~A~a~llk~~pdirLv 433 (578)
T PRK15490 373 PPSTEPSSEVPHK-----------------IWQQFTQKT--QDADTTIGGVFRFVGDKNPFAWIDFAARYLQHHPATRFV 433 (578)
T ss_pred hhhcCccchhhHH-----------------HHHHhhhcc--CCCCcEEEEEEEEehhcCHHHHHHHHHHHHhHCCCeEEE
Confidence 9988775422110 001 1233 345678999999999999999999999988888999999
Q ss_pred EEeCCCCCCCccHHHHHHHHHHHHHHHHcCCCCcEEEccCCCCcCChHHHHHHHHccCcEEEeCCCCCCCcHHHHHHHHc
Q 003962 584 VVGGDRRKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTC 663 (783)
Q Consensus 584 IVG~g~~~~~~~~ee~~~~~~l~~li~~~~L~~~V~flG~~~~~~~~~el~~~ia~aadvfV~PS~~E~fGltvlEAMa~ 663 (783)
|+|+|+. .++++++++++++.++|.|+|++ +++..+|+. +|+||+||.+|+||++++|||+|
T Consensus 434 IVGdG~~-----------~eeLk~la~elgL~d~V~FlG~~------~Dv~~~Laa-ADVfVlPS~~EGfp~vlLEAMA~ 495 (578)
T PRK15490 434 LVGDGDL-----------RAEAQKRAEQLGILERILFVGAS------RDVGYWLQK-MNVFILFSRYEGLPNVLIEAQMV 495 (578)
T ss_pred EEeCchh-----------HHHHHHHHHHcCCCCcEEECCCh------hhHHHHHHh-CCEEEEcccccCccHHHHHHHHh
Confidence 9999954 46788999999999999999942 467788885 99999999999999999999999
Q ss_pred CCcEEEcCccccccccccCceEEEECCCCHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Q 003962 664 GLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEEKYTWKIYSQRLLTLTG 743 (783)
Q Consensus 664 GlPVVat~~GG~~EiI~dg~~G~li~p~d~e~lAeaI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~~~a~~ll~ly~ 743 (783)
|+|||+|+.||..|+|.+|++|++++++|++++++++..+ ..+..+...+..|+++|++++.++|||+.++++|+++|.
T Consensus 496 GlPVVATdvGG~~EiV~dG~nG~LVp~~D~~aLa~ai~lA-~aL~~ll~~~~~mg~~ARe~V~e~FS~e~Mv~~y~ki~~ 574 (578)
T PRK15490 496 GVPVISTPAGGSAECFIEGVSGFILDDAQTVNLDQACRYA-EKLVNLWRSRTGICQQTQSFLQERFTVEHMVGTFVKTIA 574 (578)
T ss_pred CCCEEEeCCCCcHHHcccCCcEEEECCCChhhHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999998877432 233455556678999999999999999999999999986
Q ss_pred H
Q 003962 744 V 744 (783)
Q Consensus 744 ~ 744 (783)
.
T Consensus 575 ~ 575 (578)
T PRK15490 575 S 575 (578)
T ss_pred h
Confidence 4
No 31
>cd03792 GT1_Trehalose_phosphorylase Trehalose phosphorylase (TP) reversibly catalyzes trehalose synthesis and degradation from alpha-glucose-1-phosphate (alpha-Glc-1-P) and glucose. The catalyzing activity includes the phosphorolysis of trehalose, which produce alpha-Glc-1-P and glucose, and the subsequent synthesis of trehalose. This family is most closely related to the GT1 family of glycosyltransferases.
Probab=100.00 E-value=2.4e-35 Score=327.60 Aligned_cols=287 Identities=18% Similarity=0.202 Sum_probs=214.5
Q ss_pred CCCceEEEEcCCCchHHHHHHHHhcCCcEEEEecCCCccCCCCCchhhhhccccccccchhhHhHHhhhcCCEEEcCCHH
Q 003962 381 QGKPDLIIGNYSDGNIVASLLAHKLGVTQCTIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTFQ 460 (783)
Q Consensus 381 ~~~pDIIh~h~~~~~lva~llar~lgvp~v~t~H~l~~~~~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~ 460 (783)
..+|||||+|++....+ ..+++..++|+|++.|+..... ....|+ .....++.+|.+++.|..
T Consensus 83 ~~~~Dvv~~h~~~~~~~-~~~~~~~~~~~i~~~H~~~~~~---~~~~~~-------------~~~~~~~~~d~~i~~~~~ 145 (372)
T cd03792 83 DLDADVVVIHDPQPLAL-PLFKKKRGRPWIWRCHIDLSSP---NRRVWD-------------FLQPYIEDYDAAVFHLPE 145 (372)
T ss_pred cCCCCEEEECCCCchhH-HHhhhcCCCeEEEEeeeecCCC---cHHHHH-------------HHHHHHHhCCEEeecHHH
Confidence 35899999998765332 2223334899999999743211 111111 112356789999888844
Q ss_pred HHhhccccccccccccccccccceeeeccCCCCCCcEEEecCCccCCCCC--CCchHHHhhccCchhhHHhhcChhhhhh
Q 003962 461 EIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYF--PYTEEKRRLKSFHPEIEELLYSDVENKE 538 (783)
Q Consensus 461 ~~~~~~~~v~qy~~~~~f~~p~l~~v~~gi~~~~~k~~VIpnGvD~~~f~--p~~~~~~r~~~~~~~~~~~l~~~~~~~~ 538 (783)
.+. .++. ..++ +||||+|..... +...... ...++
T Consensus 146 ~~~------------------------~~~~--~~~~-vipngvd~~~~~~~~~~~~~~----------------~~~~~ 182 (372)
T cd03792 146 YVP------------------------PQVP--PRKV-IIPPSIDPLSGKNRELSPADI----------------EYILE 182 (372)
T ss_pred hcC------------------------CCCC--CceE-EeCCCCCCCccccCCCCHHHH----------------HHHHH
Confidence 322 1222 4455 999999975322 1111111 12234
Q ss_pred hhccccCCCCcEEEEEecccCCCCHHHHHHHHHHhHccCCCeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHHcCCCCcE
Q 003962 539 HLCVLKDRNKPILFTMARLDRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLNGQF 618 (783)
Q Consensus 539 ~~gll~~~~k~iIl~vGRL~~~Kgl~~LieA~~~l~~~~~~~~LvIVG~g~~~~~~~~ee~~~~~~l~~li~~~~L~~~V 618 (783)
.+|+ ++++++|+++||+++.||++.+++|++.+.+..++++|+|+|+|+.... +..+.++++.+..++.++|
T Consensus 183 ~~~~--~~~~~~i~~vgrl~~~Kg~~~ll~a~~~l~~~~~~~~l~i~G~g~~~~~------~~~~~~~~~~~~~~~~~~v 254 (372)
T cd03792 183 KYGI--DPERPYITQVSRFDPWKDPFGVIDAYRKVKERVPDPQLVLVGSGATDDP------EGWIVYEEVLEYAEGDPDI 254 (372)
T ss_pred HhCC--CCCCcEEEEEeccccccCcHHHHHHHHHHHhhCCCCEEEEEeCCCCCCc------hhHHHHHHHHHHhCCCCCe
Confidence 5666 6788999999999999999999999999988778999999999975211 1122344555566778899
Q ss_pred EEccCCCCcCChHHHHHHHHccCcEEEeCCCCCCCcHHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHHHHHH
Q 003962 619 RWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAE 698 (783)
Q Consensus 619 ~flG~~~~~~~~~el~~~ia~aadvfV~PS~~E~fGltvlEAMa~GlPVVat~~GG~~EiI~dg~~G~li~p~d~e~lAe 698 (783)
.|+|... ++.+++..+++ ++|+||+||.+|+||++++|||+||+|||+|+.||..++|.++.+|++++ +++++++
T Consensus 255 ~~~~~~~--~~~~~~~~~~~-~ad~~v~~s~~Eg~g~~~lEA~a~G~Pvv~s~~~~~~~~i~~~~~g~~~~--~~~~~a~ 329 (372)
T cd03792 255 HVLTLPP--VSDLEVNALQR-ASTVVLQKSIREGFGLTVTEALWKGKPVIAGPVGGIPLQIEDGETGFLVD--TVEEAAV 329 (372)
T ss_pred EEEecCC--CCHHHHHHHHH-hCeEEEeCCCccCCCHHHHHHHHcCCCEEEcCCCCchhhcccCCceEEeC--CcHHHHH
Confidence 9998431 26678888888 49999999999999999999999999999999999999999999999987 5678888
Q ss_pred HHHHHHHHhhCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Q 003962 699 ILVDFFEKCKADPSYWDKISLGGLKRIEEKYTWKIYSQRLLTLTGV 744 (783)
Q Consensus 699 aI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~~~a~~ll~ly~~ 744 (783)
+|.+++ .|++.+++|+++|++.+.++|||+.++++++++|+.
T Consensus 330 ~i~~ll----~~~~~~~~~~~~a~~~~~~~~s~~~~~~~~~~~~~~ 371 (372)
T cd03792 330 RILYLL----RDPELRRKMGANAREHVRENFLITRHLKDYLYLISK 371 (372)
T ss_pred HHHHHH----cCHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHh
Confidence 886655 899999999999999998999999999999999864
No 32
>cd03819 GT1_WavL_like This family is most closely related to the GT1 family of glycosyltransferases. WavL in Vibrio cholerae has been shown to be involved in the biosynthesis of the lipopolysaccharide core.
Probab=100.00 E-value=2.7e-35 Score=321.79 Aligned_cols=347 Identities=19% Similarity=0.241 Sum_probs=259.6
Q ss_pred CCCcchhhHHHHHHHHHHHHHHHHHHCCCceeeceeEEeCCCCCCCCCcccceeeeecCccCeEEEEeccCCCccccccc
Q 003962 276 DTGGQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRLLPDAVGTTCGQRLEKVYGTKYSDILRVPFRTEKGVVRKW 355 (783)
Q Consensus 276 ~tGG~~vyv~d~araL~~eLa~~L~~~GheV~~~i~VvT~~~~~~~g~~~~~~~e~i~~~~~v~Ilrvp~~~~~~~~~~~ 355 (783)
+.||.+.++. +|+++|+++||+|. +++...+.. ... ...++.+++++....+
T Consensus 8 ~~gG~e~~~~--------~l~~~L~~~g~~v~----v~~~~~~~~------~~~----~~~~~~~~~~~~~~~~------ 59 (355)
T cd03819 8 ESGGVERGTL--------ELARALVERGHRSL----VASAGGRLV------AEL----EAEGSRHIKLPFISKN------ 59 (355)
T ss_pred ccCcHHHHHH--------HHHHHHHHcCCEEE----EEcCCCchH------HHH----HhcCCeEEEccccccc------
Confidence 4599999999 67777899999999 887532111 111 1124556666654321
Q ss_pred cccccchhhHHHHHHHHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHhcCCcEEEEecCCCccCCCCCchhhhhccccc
Q 003962 356 ISRFEVWPYLETYTEDVAVEIAKELQGKPDLIIGNYSDGNIVASLLAHKLGVTQCTIAHALEKTKYPDSDIYWKNLDDKY 435 (783)
Q Consensus 356 isr~~i~~~l~~f~~~~~~~l~~~l~~~pDIIh~h~~~~~lva~llar~lgvp~v~t~H~l~~~~~~~s~~~~~~~~~~y 435 (783)
.+..+. +.....+.+. +.+||+||+|+....+.+.++++..++|++++.|+......
T Consensus 60 -----~~~~~~-~~~~l~~~~~---~~~~dii~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~-------------- 116 (355)
T cd03819 60 -----PLRILL-NVARLRRLIR---EEKVDIVHARSRAPAWSAYLAARRTRPPFVTTVHGFYSVNF-------------- 116 (355)
T ss_pred -----hhhhHH-HHHHHHHHHH---HcCCCEEEECCCchhHHHHHHHHhcCCCEEEEeCCchhhHH--------------
Confidence 111111 1112222222 25799999998877778888888889999999998633110
Q ss_pred cccchhhHhHHhhhcCCEEEcCCHHHHhhccccccccccccccccccceeeeccCCCCCCcEEEecCCccCCCCCCCchH
Q 003962 436 HFSCQFTADLIAMNHTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEE 515 (783)
Q Consensus 436 ~f~~~~~~e~~a~~~AD~IIt~S~~~~~~~~~~v~qy~~~~~f~~p~l~~v~~gi~~~~~k~~VIpnGvD~~~f~p~~~~ 515 (783)
.....+..+|.++++|+...+.+.+. .+++ ..++.+||||+|...|.+....
T Consensus 117 -------~~~~~~~~~~~vi~~s~~~~~~~~~~-------------------~~~~--~~k~~~i~ngi~~~~~~~~~~~ 168 (355)
T cd03819 117 -------RYNAIMARGDRVIAVSNFIADHIREN-------------------YGVD--PDRIRVIPRGVDLDRFDPGAVP 168 (355)
T ss_pred -------HHHHHHHhcCEEEEeCHHHHHHHHHh-------------------cCCC--hhhEEEecCCccccccCccccc
Confidence 01234678999999998776633311 1232 6789999999999887654322
Q ss_pred HHhhccCchhhHHhhcChhhhhhhhccccCCCCcEEEEEecccCCCCHHHHHHHHHHhHccCCCeEEEEEeCCCCCCCcc
Q 003962 516 KRRLKSFHPEIEELLYSDVENKEHLCVLKDRNKPILFTMARLDRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKD 595 (783)
Q Consensus 516 ~~r~~~~~~~~~~~l~~~~~~~~~~gll~~~~k~iIl~vGRL~~~Kgl~~LieA~~~l~~~~~~~~LvIVG~g~~~~~~~ 595 (783)
.... ...++.++. ++++++++++||+++.||++.+++++.++.+..++++|+|+|+++..
T Consensus 169 ~~~~--------------~~~~~~~~~--~~~~~~i~~~Gr~~~~Kg~~~li~~~~~l~~~~~~~~l~ivG~~~~~---- 228 (355)
T cd03819 169 PERI--------------LALAREWPL--PKGKPVILLPGRLTRWKGQEVFIEALARLKKDDPDVHLLIVGDAQGR---- 228 (355)
T ss_pred hHHH--------------HHHHHHcCC--CCCceEEEEeeccccccCHHHHHHHHHHHHhcCCCeEEEEEECCccc----
Confidence 1110 012334444 56778999999999999999999999999887789999999998652
Q ss_pred HHHHHHHHHHHHHHHHcCCCCcEEEccCCCCcCChHHHHHHHHccCcEEEeCC-CCCCCcHHHHHHHHcCCcEEEcCccc
Q 003962 596 LEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPA-LYEAFGLTVVEAMTCGLPTFATCKGG 674 (783)
Q Consensus 596 ~ee~~~~~~l~~li~~~~L~~~V~flG~~~~~~~~~el~~~ia~aadvfV~PS-~~E~fGltvlEAMa~GlPVVat~~GG 674 (783)
....+.+.+.++++++.++|.|+|. .+++..+++. +|++++|| ..|+||++++|||+||+|||+|+.||
T Consensus 229 ---~~~~~~~~~~~~~~~~~~~v~~~g~------~~~~~~~l~~-ad~~i~ps~~~e~~~~~l~EA~a~G~PvI~~~~~~ 298 (355)
T cd03819 229 ---RFYYAELLELIKRLGLQDRVTFVGH------CSDMPAAYAL-ADIVVSASTEPEAFGRTAVEAQAMGRPVIASDHGG 298 (355)
T ss_pred ---chHHHHHHHHHHHcCCcceEEEcCC------cccHHHHHHh-CCEEEecCCCCCCCchHHHHHHhcCCCEEEcCCCC
Confidence 1334556677888898899999994 4578888885 99999999 79999999999999999999999999
Q ss_pred cccccccCceEEEECCCCHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhCCHHHH
Q 003962 675 PAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEEKYTWKIY 734 (783)
Q Consensus 675 ~~EiI~dg~~G~li~p~d~e~lAeaI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~~~ 734 (783)
..|++.++.+|++++++|+++++++|..++ ..|++.+++++++|++.+.++|||+.+
T Consensus 299 ~~e~i~~~~~g~~~~~~~~~~l~~~i~~~~---~~~~~~~~~~~~~a~~~~~~~f~~~~~ 355 (355)
T cd03819 299 ARETVRPGETGLLVPPGDAEALAQALDQIL---SLLPEGRAKMFAKARMCVETLFSYDRM 355 (355)
T ss_pred cHHHHhCCCceEEeCCCCHHHHHHHHHHHH---hhCHHHHHHHHHHHHHHHHHhhhhccC
Confidence 999999999999999999999999996554 268999999999999999999999863
No 33
>cd03821 GT1_Bme6_like This family is most closely related to the GT1 family of glycosyltransferases. Bme6 in Brucella melitensis has been shown to be involved in the biosynthesis of a polysaccharide.
Probab=100.00 E-value=8.9e-35 Score=315.19 Aligned_cols=372 Identities=18% Similarity=0.211 Sum_probs=262.4
Q ss_pred eEEEEcccccccccCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHHCCCceeeceeEEeCCCCCCCCCcccceeeeecCc
Q 003962 256 NVVILTPHGYFAQDDVLGYPDTGGQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRLLPDAVGTTCGQRLEKVYGT 335 (783)
Q Consensus 256 rI~iis~h~~~~~~~~lg~p~tGG~~vyv~d~araL~~eLa~~L~~~GheV~~~i~VvT~~~~~~~g~~~~~~~e~i~~~ 335 (783)
||++++++.+ |..||.+.++. +|++.|+++||+|+ ++|.......... ...
T Consensus 1 kIl~i~~~~~---------~~~gG~~~~~~--------~l~~~L~~~g~~v~----v~~~~~~~~~~~~------~~~-- 51 (375)
T cd03821 1 KILHVIPSFD---------PKYGGPVRVVL--------NLSKALAKLGHEVT----VATTDAGGDPLLV------ALN-- 51 (375)
T ss_pred CeEEEcCCCC---------cccCCeehHHH--------HHHHHHHhcCCcEE----EEecCCCCccchh------hcc--
Confidence 6888887764 46799999999 67777889999999 8876533211000 000
Q ss_pred cCeEEEEeccCCCccccccccccccchhhHHHHHHHHHHHHHHHcCCCceEEEEcCCCc--hHHHHHHHHhcCCcEEEEe
Q 003962 336 KYSDILRVPFRTEKGVVRKWISRFEVWPYLETYTEDVAVEIAKELQGKPDLIIGNYSDG--NIVASLLAHKLGVTQCTIA 413 (783)
Q Consensus 336 ~~v~Ilrvp~~~~~~~~~~~isr~~i~~~l~~f~~~~~~~l~~~l~~~pDIIh~h~~~~--~lva~llar~lgvp~v~t~ 413 (783)
+........ .. .. ......................+||+||+|.... ...+...++..++|++++.
T Consensus 52 -~~~~~~~~~-~~-~~---------~~~~~~~~~~~~~~~~~~~~~~~~dii~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 119 (375)
T cd03821 52 -GVPVKLFSI-NV-AY---------GLNLARYLFPPSLLAWLRLNIREADIVHVHGLWSYPSLAAARAARKYGIPYVVSP 119 (375)
T ss_pred -Cceeeeccc-ch-hh---------hhhhhhhccChhHHHHHHHhCCCCCEEEEecccchHHHHHHHHHHHhCCCEEEEc
Confidence 000000000 00 00 0000000000111111222245899999987433 4566666777899999999
Q ss_pred cCCCccCCCCCchhhhhccccccccchhhHhHHhhhcCCEEEcCCHHHHhhccccccccccccccccccceeeeccCCCC
Q 003962 414 HALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVF 493 (783)
Q Consensus 414 H~l~~~~~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~~~~~~~~v~qy~~~~~f~~p~l~~v~~gi~~~ 493 (783)
|+........ ...+.. ...........++.++.++++|......... . ..
T Consensus 120 ~~~~~~~~~~-~~~~~~------~~~~~~~~~~~~~~~~~i~~~s~~~~~~~~~---------------------~--~~ 169 (375)
T cd03821 120 HGMLDPWALP-HKALKK------RLAWFLFERRLLQAAAAVHATSEQEAAEIRR---------------------L--GL 169 (375)
T ss_pred cccccccccc-cchhhh------HHHHHHHHHHHHhcCCEEEECCHHHHHHHHh---------------------h--CC
Confidence 9863322110 001110 0111223456788999999999766542111 1 12
Q ss_pred CCcEEEecCCccCCCCCCCchHHHhhccCchhhHHhhcChhhhhhhhccccCCCCcEEEEEecccCCCCHHHHHHHHHHh
Q 003962 494 DPKFNIVSPGADMSIYFPYTEEKRRLKSFHPEIEELLYSDVENKEHLCVLKDRNKPILFTMARLDRVKNLTGLVEWYGKN 573 (783)
Q Consensus 494 ~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~~~~~l~~~~~~~~~~gll~~~~k~iIl~vGRL~~~Kgl~~LieA~~~l 573 (783)
..++.++|||+|.+.+.+...... ++..+. +.++++|+++||+.+.||++.+++++.++
T Consensus 170 ~~~~~vi~~~~~~~~~~~~~~~~~-------------------~~~~~~--~~~~~~i~~~G~~~~~K~~~~li~a~~~l 228 (375)
T cd03821 170 KAPIAVIPNGVDIPPFAALPSRGR-------------------RRKFPI--LPDKRIILFLGRLHPKKGLDLLIEAFAKL 228 (375)
T ss_pred cccEEEcCCCcChhccCcchhhhh-------------------hhhccC--CCCCcEEEEEeCcchhcCHHHHHHHHHHh
Confidence 668999999999988766443211 122333 56788999999999999999999999999
Q ss_pred HccCCCeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHHcCCCCcEEEccCCCCcCChHHHHHHHHccCcEEEeCCCCCCC
Q 003962 574 AKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAF 653 (783)
Q Consensus 574 ~~~~~~~~LvIVG~g~~~~~~~~ee~~~~~~l~~li~~~~L~~~V~flG~~~~~~~~~el~~~ia~aadvfV~PS~~E~f 653 (783)
.+..++++|+++|.+... +...+..+++++++.++|.|+| .++.+++..+++. +|++|+||..|+|
T Consensus 229 ~~~~~~~~l~i~G~~~~~---------~~~~~~~~~~~~~~~~~v~~~g----~~~~~~~~~~~~~-adv~v~ps~~e~~ 294 (375)
T cd03821 229 AERFPDWHLVIAGPDEGG---------YRAELKQIAAALGLEDRVTFTG----MLYGEDKAAALAD-ADLFVLPSHSENF 294 (375)
T ss_pred hhhcCCeEEEEECCCCcc---------hHHHHHHHHHhcCccceEEEcC----CCChHHHHHHHhh-CCEEEeccccCCC
Confidence 988899999999987542 2345556678889999999999 7777899999996 9999999999999
Q ss_pred cHHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhCCHHH
Q 003962 654 GLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEEKYTWKI 733 (783)
Q Consensus 654 GltvlEAMa~GlPVVat~~GG~~EiI~dg~~G~li~p~d~e~lAeaI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~~ 733 (783)
|++++|||+||+|||+|+.||..|++.+ .+|+++++ +.++++++|.+++ +|++.++++++++++.+.++|||+.
T Consensus 295 ~~~~~Eama~G~PvI~~~~~~~~~~~~~-~~~~~~~~-~~~~~~~~i~~l~----~~~~~~~~~~~~~~~~~~~~~s~~~ 368 (375)
T cd03821 295 GIVVAEALACGTPVVTTDKVPWQELIEY-GCGWVVDD-DVDALAAALRRAL----ELPQRLKAMGENGRALVEERFSWTA 368 (375)
T ss_pred CcHHHHHHhcCCCEEEcCCCCHHHHhhc-CceEEeCC-ChHHHHHHHHHHH----hCHHHHHHHHHHHHHHHHHhcCHHH
Confidence 9999999999999999999999999988 78998865 5699999996665 8999999999999999999999999
Q ss_pred HHHHHH
Q 003962 734 YSQRLL 739 (783)
Q Consensus 734 ~a~~ll 739 (783)
++++++
T Consensus 369 ~~~~~~ 374 (375)
T cd03821 369 IAQQLL 374 (375)
T ss_pred HHHHhh
Confidence 999886
No 34
>cd03799 GT1_amsK_like This is a family of GT1 glycosyltransferases found specifically in certain bacteria. amsK in Erwinia amylovora, has been reported to be involved in the biosynthesis of amylovoran, a exopolysaccharide acting as a virulence factor.
Probab=100.00 E-value=5.7e-34 Score=310.64 Aligned_cols=271 Identities=21% Similarity=0.285 Sum_probs=224.2
Q ss_pred CCceEEEEcCCCc-hHHHHHHHHhcCCcEEEEecCCCccCCCCCchhhhhccccccccchhhHhHHhhhcCCEEEcCCHH
Q 003962 382 GKPDLIIGNYSDG-NIVASLLAHKLGVTQCTIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTFQ 460 (783)
Q Consensus 382 ~~pDIIh~h~~~~-~lva~llar~lgvp~v~t~H~l~~~~~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~ 460 (783)
.+||+||+|+... ...+.+.++..++|++++.|+..... .... ......++.+|.++++|+.
T Consensus 78 ~~~Dii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~---------------~~~~~~~~~~~~vi~~s~~ 140 (355)
T cd03799 78 LGIDHIHAHFGTTPATVAMLASRLGGIPYSFTAHGKDIFR--SPDA---------------IDLDEKLARADFVVAISEY 140 (355)
T ss_pred cCCCEEEECCCCchHHHHHHHHHhcCCCEEEEEecccccc--cCch---------------HHHHHHHhhCCEEEECCHH
Confidence 5799999998754 45555666666899999999743211 0000 1234568899999999998
Q ss_pred HHhhccccccccccccccccccceeeeccCCCCCCcEEEecCCccCCCCCCCchHHHhhccCchhhHHhhcChhhhhhhh
Q 003962 461 EIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEEKRRLKSFHPEIEELLYSDVENKEHL 540 (783)
Q Consensus 461 ~~~~~~~~v~qy~~~~~f~~p~l~~v~~gi~~~~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~~~~~l~~~~~~~~~~ 540 (783)
.++.+++.. +.. ..++.++|||+|.+.+.+....
T Consensus 141 ~~~~l~~~~-------------------~~~--~~~~~vi~~~~d~~~~~~~~~~------------------------- 174 (355)
T cd03799 141 NRQQLIRLL-------------------GCD--PDKIHVVHCGVDLERFPPRPPP------------------------- 174 (355)
T ss_pred HHHHHHHhc-------------------CCC--cccEEEEeCCcCHHHcCCcccc-------------------------
Confidence 877433321 222 6789999999998877554300
Q ss_pred ccccCCCCcEEEEEecccCCCCHHHHHHHHHHhHccCCCeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHHcCCCCcEEE
Q 003962 541 CVLKDRNKPILFTMARLDRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLNGQFRW 620 (783)
Q Consensus 541 gll~~~~k~iIl~vGRL~~~Kgl~~LieA~~~l~~~~~~~~LvIVG~g~~~~~~~~ee~~~~~~l~~li~~~~L~~~V~f 620 (783)
...+++.|+++|++.+.||++.+++++.++.+..++++|+++|+++. ...+.+.++++++.++|+|
T Consensus 175 ---~~~~~~~i~~~g~~~~~k~~~~l~~~~~~l~~~~~~~~l~i~G~~~~-----------~~~~~~~~~~~~~~~~v~~ 240 (355)
T cd03799 175 ---PPGEPLRILSVGRLVEKKGLDYLLEALALLKDRGIDFRLDIVGDGPL-----------RDELEALIAELGLEDRVTL 240 (355)
T ss_pred ---ccCCCeEEEEEeeeccccCHHHHHHHHHHHhhcCCCeEEEEEECCcc-----------HHHHHHHHHHcCCCCeEEE
Confidence 03456789999999999999999999999988788999999999865 3567788888899899999
Q ss_pred ccCCCCcCChHHHHHHHHccCcEEEeCCCC------CCCcHHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHH
Q 003962 621 ISSQMNRVRNGELYRYICDTKGAFVQPALY------EAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGE 694 (783)
Q Consensus 621 lG~~~~~~~~~el~~~ia~aadvfV~PS~~------E~fGltvlEAMa~GlPVVat~~GG~~EiI~dg~~G~li~p~d~e 694 (783)
.| .++.+++..+++. +|++++||.. |+||++++|||+||+|||+|+.|+..|++.++.+|++++++|++
T Consensus 241 ~g----~~~~~~l~~~~~~-adi~l~~s~~~~~~~~e~~~~~~~Ea~a~G~Pvi~~~~~~~~~~i~~~~~g~~~~~~~~~ 315 (355)
T cd03799 241 LG----AKSQEEVRELLRA-ADLFVLPSVTAADGDREGLPVVLMEAMAMGLPVISTDVSGIPELVEDGETGLLVPPGDPE 315 (355)
T ss_pred CC----cCChHHHHHHHHh-CCEEEecceecCCCCccCccHHHHHHHHcCCCEEecCCCCcchhhhCCCceEEeCCCCHH
Confidence 99 7778899999996 9999999998 99999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhCCHHHHHHHH
Q 003962 695 QAAEILVDFFEKCKADPSYWDKISLGGLKRIEEKYTWKIYSQRL 738 (783)
Q Consensus 695 ~lAeaI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~~~a~~l 738 (783)
+++++|.+++ +|++.+.+|+++|++.++++|||+..++++
T Consensus 316 ~l~~~i~~~~----~~~~~~~~~~~~a~~~~~~~~s~~~~~~~l 355 (355)
T cd03799 316 ALADAIERLL----DDPELRREMGEAGRARVEEEFDIRKQAARL 355 (355)
T ss_pred HHHHHHHHHH----hCHHHHHHHHHHHHHHHHHhcCHHHHhhcC
Confidence 9999997766 799999999999999999999999998763
No 35
>cd03795 GT1_like_4 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP-linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=100.00 E-value=1.1e-33 Score=308.49 Aligned_cols=354 Identities=19% Similarity=0.242 Sum_probs=256.0
Q ss_pred eEEEEcccccccccCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHHCCCceeeceeEEeCCCCCCCCCcccceeeeecCc
Q 003962 256 NVVILTPHGYFAQDDVLGYPDTGGQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRLLPDAVGTTCGQRLEKVYGT 335 (783)
Q Consensus 256 rI~iis~h~~~~~~~~lg~p~tGG~~vyv~d~araL~~eLa~~L~~~GheV~~~i~VvT~~~~~~~g~~~~~~~e~i~~~ 335 (783)
||+++++..+ |+.||.+.++. +|+++|.++||+|+ |++......... . ..
T Consensus 1 kil~i~~~~~---------p~~gG~~~~~~--------~l~~~L~~~g~~v~----v~~~~~~~~~~~------~---~~ 50 (357)
T cd03795 1 RVLHVGKFYP---------PDRGGIEQVIR--------DLAEGLAARGIEVA----VLCASPEPKGRD------E---ER 50 (357)
T ss_pred CeeEecCCCC---------CCCCcHHHHHH--------HHHHHHHhCCCceE----EEecCCCCcchh------h---hc
Confidence 6889986665 45799999999 67777899999999 887653322110 0 11
Q ss_pred cCeEEEEeccCCCccccccccccccchhhHHHHHHHHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHhcCCcEEEEecC
Q 003962 336 KYSDILRVPFRTEKGVVRKWISRFEVWPYLETYTEDVAVEIAKELQGKPDLIIGNYSDGNIVASLLAHKLGVTQCTIAHA 415 (783)
Q Consensus 336 ~~v~Ilrvp~~~~~~~~~~~isr~~i~~~l~~f~~~~~~~l~~~l~~~pDIIh~h~~~~~lva~llar~lgvp~v~t~H~ 415 (783)
.+..+.+++..... ...+....+ ...+. ....+||+||+|++.............++|.+.+.|+
T Consensus 51 ~~~~~~~~~~~~~~----------~~~~~~~~~----~~~~~-~~~~~~Dii~~~~~~~~~~~~~~~~~~~~~~i~~~h~ 115 (357)
T cd03795 51 NGHRVIRAPSLLNV----------ASTPFSPSF----FKQLK-KLAKKADVIHLHFPNPLADLALLLLPRKKPVVVHWHS 115 (357)
T ss_pred cCceEEEeeccccc----------ccccccHHH----HHHHH-hcCCCCCEEEEecCcchHHHHHHHhccCceEEEEEcC
Confidence 23345554432210 011110111 11111 2245899999998765333323333368899999996
Q ss_pred CCccCCCCCchhhhhccccccccchhhHhHHhhhcCCEEEcCCHHHHhhccccccccccccccccccceeeeccCCCCCC
Q 003962 416 LEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDP 495 (783)
Q Consensus 416 l~~~~~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~~~~~~~~v~qy~~~~~f~~p~l~~v~~gi~~~~~ 495 (783)
..... .. ....++ ..+...++.+|.++++|+...+.+... .....
T Consensus 116 ~~~~~----~~----~~~~~~-----~~~~~~~~~~d~vi~~s~~~~~~~~~~----------------------~~~~~ 160 (357)
T cd03795 116 DIVKQ----KL----LLKLYR-----PLQRRFLRRADAIVATSPNYAETSPVL----------------------RRFRD 160 (357)
T ss_pred hhhcc----ch----hhhhhh-----HHHHHHHHhcCEEEeCcHHHHHHHHHh----------------------cCCcc
Confidence 32111 00 001111 124457899999999998765522211 11146
Q ss_pred cEEEecCCccCCCCCCCchHHHhhccCchhhHHhhcChhhhhhhhccccCCCCcEEEEEecccCCCCHHHHHHHHHHhHc
Q 003962 496 KFNIVSPGADMSIYFPYTEEKRRLKSFHPEIEELLYSDVENKEHLCVLKDRNKPILFTMARLDRVKNLTGLVEWYGKNAK 575 (783)
Q Consensus 496 k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~~~~~l~~~~~~~~~~gll~~~~k~iIl~vGRL~~~Kgl~~LieA~~~l~~ 575 (783)
++.+||||+|.+.+.+...... ..... +.+++.|+|+||+.+.||++.+++|+.++.
T Consensus 161 ~~~~i~~gi~~~~~~~~~~~~~--------------------~~~~~--~~~~~~i~~~G~~~~~K~~~~li~a~~~l~- 217 (357)
T cd03795 161 KVRVIPLGLDPARYPRPDALEE--------------------AIWRR--AAGRPFFLFVGRLVYYKGLDVLLEAAAALP- 217 (357)
T ss_pred ceEEecCCCChhhcCCcchhhh--------------------HhhcC--CCCCcEEEEecccccccCHHHHHHHHHhcc-
Confidence 7899999999987765432211 00111 456789999999999999999999999885
Q ss_pred cCCCeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHHcCCCCcEEEccCCCCcCChHHHHHHHHccCcEEEeCCC--CCCC
Q 003962 576 LRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPAL--YEAF 653 (783)
Q Consensus 576 ~~~~~~LvIVG~g~~~~~~~~ee~~~~~~l~~li~~~~L~~~V~flG~~~~~~~~~el~~~ia~aadvfV~PS~--~E~f 653 (783)
+++|+|+|+|+. ...+.+.++++++.++|.|+| .++.+++..+++. +|++++||. .|+|
T Consensus 218 ---~~~l~i~G~g~~-----------~~~~~~~~~~~~~~~~V~~~g----~v~~~~~~~~~~~-ad~~i~ps~~~~e~~ 278 (357)
T cd03795 218 ---DAPLVIVGEGPL-----------EAELEALAAALGLLDRVRFLG----RLDDEEKAALLAA-CDVFVFPSVERSEAF 278 (357)
T ss_pred ---CcEEEEEeCChh-----------HHHHHHHHHhcCCcceEEEcC----CCCHHHHHHHHHh-CCEEEeCCccccccc
Confidence 799999999854 356778888889999999999 7778899999985 999999996 5999
Q ss_pred cHHHHHHHHcCCcEEEcCcccccccccc-CceEEEECCCCHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhCCHH
Q 003962 654 GLTVVEAMTCGLPTFATCKGGPAEIIVN-GKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEEKYTWK 732 (783)
Q Consensus 654 GltvlEAMa~GlPVVat~~GG~~EiI~d-g~~G~li~p~d~e~lAeaI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~ 732 (783)
|++++|||+||+|||+|+.|+..+.+.+ +.+|++++++|+++++++|.+++ +|++.+++|++++++.+.++|||+
T Consensus 279 g~~~~Ea~~~g~Pvi~~~~~~~~~~i~~~~~~g~~~~~~d~~~~~~~i~~l~----~~~~~~~~~~~~~~~~~~~~~s~~ 354 (357)
T cd03795 279 GIVLLEAMAFGKPVISTEIGTGGSYVNLHGVTGLVVPPGDPAALAEAIRRLL----EDPELRERLGEAARERAEEEFTAD 354 (357)
T ss_pred chHHHHHHHcCCCEEecCCCCchhHHhhCCCceEEeCCCCHHHHHHHHHHHH----HCHHHHHHHHHHHHHHHHHhcchH
Confidence 9999999999999999999999999886 89999999999999999997766 899999999999999999999999
Q ss_pred HHH
Q 003962 733 IYS 735 (783)
Q Consensus 733 ~~a 735 (783)
.++
T Consensus 355 ~~~ 357 (357)
T cd03795 355 RMV 357 (357)
T ss_pred hhC
Confidence 764
No 36
>cd03813 GT1_like_3 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=100.00 E-value=4.2e-35 Score=336.78 Aligned_cols=292 Identities=18% Similarity=0.236 Sum_probs=232.4
Q ss_pred CCceEEEEcCCC-chHHHHHHHHhcCCcEEEEecCCCccCCC--CCchhhhh--ccc-cccccchhhHhHHhhhcCCEEE
Q 003962 382 GKPDLIIGNYSD-GNIVASLLAHKLGVTQCTIAHALEKTKYP--DSDIYWKN--LDD-KYHFSCQFTADLIAMNHTDFII 455 (783)
Q Consensus 382 ~~pDIIh~h~~~-~~lva~llar~lgvp~v~t~H~l~~~~~~--~s~~~~~~--~~~-~y~f~~~~~~e~~a~~~AD~II 455 (783)
.++||||+|... +++.+.+++++.|+|+|+|.|+....... .....|.. +.. ..++ ....++.+++.||.|+
T Consensus 172 ~~~dviH~~s~~~~g~~~~~~~~~~~~p~I~t~Hg~~~~e~~~~~~~~~~~~~~~~~~~~~~--~~~l~~~~~~~ad~Ii 249 (475)
T cd03813 172 PKADVYHAVSTGYAGLLGALAKARRGTPFLLTEHGIYTRERKIELLQADWEMSYFRRLWIRF--FESLGRLAYQAADRIT 249 (475)
T ss_pred CCCCEEeccCcchHHHHHHHHHHHhCCCEEEecCCccHHHHHHHHHhcccchHHHHHHHHHH--HHHHHHHHHHhCCEEE
Confidence 578999999754 36788888999999999999986321100 00000100 000 0011 1123566889999999
Q ss_pred cCCHHHHhhccccccccccccccccccceeeeccCCCCCCcEEEecCCccCCCCCCCchHHHhhccCchhhHHhhcChhh
Q 003962 456 TSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEEKRRLKSFHPEIEELLYSDVE 535 (783)
Q Consensus 456 t~S~~~~~~~~~~v~qy~~~~~f~~p~l~~v~~gi~~~~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~~~~~l~~~~~ 535 (783)
++|....+... ..|++ .+|+.|||||+|.+.|.+....
T Consensus 250 ~~s~~~~~~~~--------------------~~g~~--~~ki~vIpNgid~~~f~~~~~~-------------------- 287 (475)
T cd03813 250 TLYEGNRERQI--------------------EDGAD--PEKIRVIPNGIDPERFAPARRA-------------------- 287 (475)
T ss_pred ecCHHHHHHHH--------------------HcCCC--HHHeEEeCCCcCHHHcCCcccc--------------------
Confidence 99987654211 12333 6799999999999888664321
Q ss_pred hhhhhccccCCCCcEEEEEecccCCCCHHHHHHHHHHhHccCCCeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHHcCCC
Q 003962 536 NKEHLCVLKDRNKPILFTMARLDRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLN 615 (783)
Q Consensus 536 ~~~~~gll~~~~k~iIl~vGRL~~~Kgl~~LieA~~~l~~~~~~~~LvIVG~g~~~~~~~~ee~~~~~~l~~li~~~~L~ 615 (783)
+ .+.++++|+++||+.+.||++.+++|+..+.+..|+++|+|+|+++.. ..+.++++++++++++.
T Consensus 288 -----~--~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~p~~~l~IvG~g~~~-------~~~~~e~~~li~~l~l~ 353 (475)
T cd03813 288 -----R--PEKEPPVVGLIGRVVPIKDIKTFIRAAAIVRKKIPDAEGWVIGPTDED-------PEYAEECRELVESLGLE 353 (475)
T ss_pred -----c--cCCCCcEEEEEeccccccCHHHHHHHHHHHHHhCCCeEEEEECCCCcC-------hHHHHHHHHHHHHhCCC
Confidence 0 045678999999999999999999999999988899999999998531 14567889999999999
Q ss_pred CcEEEccCCCCcCChHHHHHHHHccCcEEEeCCCCCCCcHHHHHHHHcCCcEEEcCcccccccccc------CceEEEEC
Q 003962 616 GQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVN------GKSGYHID 689 (783)
Q Consensus 616 ~~V~flG~~~~~~~~~el~~~ia~aadvfV~PS~~E~fGltvlEAMa~GlPVVat~~GG~~EiI~d------g~~G~li~ 689 (783)
++|+|+| . .++..+++ .+|++|+||..|+||++++|||+||+|||+|+.||..|++.+ |.+|++++
T Consensus 354 ~~V~f~G----~---~~v~~~l~-~aDv~vlpS~~Eg~p~~vlEAma~G~PVVatd~g~~~elv~~~~~~~~g~~G~lv~ 425 (475)
T cd03813 354 DNVKFTG----F---QNVKEYLP-KLDVLVLTSISEGQPLVILEAMAAGIPVVATDVGSCRELIEGADDEALGPAGEVVP 425 (475)
T ss_pred CeEEEcC----C---ccHHHHHH-hCCEEEeCchhhcCChHHHHHHHcCCCEEECCCCChHHHhcCCcccccCCceEEEC
Confidence 9999999 2 34666777 499999999999999999999999999999999999999998 67999999
Q ss_pred CCCHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Q 003962 690 PYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEEKYTWKIYSQRLLTLTG 743 (783)
Q Consensus 690 p~d~e~lAeaI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~~~a~~ll~ly~ 743 (783)
|+|++++|++|.+++ +|++.+++|+++|++++.+.|+|+.++++|.++|+
T Consensus 426 ~~d~~~la~ai~~ll----~~~~~~~~~~~~a~~~v~~~~s~~~~~~~y~~lY~ 475 (475)
T cd03813 426 PADPEALARAILRLL----KDPELRRAMGEAGRKRVERYYTLERMIDSYRRLYL 475 (475)
T ss_pred CCCHHHHHHHHHHHh----cCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHhC
Confidence 999999999997665 89999999999999999999999999999999984
No 37
>cd03794 GT1_wbuB_like This family is most closely related to the GT1 family of glycosyltransferases. wbuB in E. coli is involved in the biosynthesis of the O26 O-antigen. It has been proposed to function as an N-acetyl-L-fucosamine (L-FucNAc) transferase.
Probab=100.00 E-value=2.2e-33 Score=305.40 Aligned_cols=387 Identities=18% Similarity=0.245 Sum_probs=271.8
Q ss_pred eEEEEcccccccccCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHHCCCceeeceeEEeCCCCCCCCCcccceeeeecCc
Q 003962 256 NVVILTPHGYFAQDDVLGYPDTGGQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRLLPDAVGTTCGQRLEKVYGT 335 (783)
Q Consensus 256 rI~iis~h~~~~~~~~lg~p~tGG~~vyv~d~araL~~eLa~~L~~~GheV~~~i~VvT~~~~~~~g~~~~~~~e~i~~~ 335 (783)
||++++++.. |..||...++. .++++|+++||+|+ +++............. ......
T Consensus 1 kIl~i~~~~~---------~~~~G~~~~~~--------~l~~~L~~~g~~v~----~~~~~~~~~~~~~~~~--~~~~~~ 57 (394)
T cd03794 1 KILILSQYFP---------PELGGGAFRTT--------ELAEELVKRGHEVT----VITGSPNYPSGKIYKG--YKREEV 57 (394)
T ss_pred CEEEEecccC---------CccCCcceeHH--------HHHHHHHhCCceEE----EEecCCCccccccccc--ceEEec
Confidence 6899997765 23488899999 66677789999999 8876543222111000 011122
Q ss_pred cCeEEEEeccCCCccccccccccccchhhHHHHHHHHHHHHHHHcCCCceEEEEcCCCc--hHHHHHHHHhcCCcEEEEe
Q 003962 336 KYSDILRVPFRTEKGVVRKWISRFEVWPYLETYTEDVAVEIAKELQGKPDLIIGNYSDG--NIVASLLAHKLGVTQCTIA 413 (783)
Q Consensus 336 ~~v~Ilrvp~~~~~~~~~~~isr~~i~~~l~~f~~~~~~~l~~~l~~~pDIIh~h~~~~--~lva~llar~lgvp~v~t~ 413 (783)
.++++.+++....... .+.. .+..+ ..|.......+.. ...+||+||++.+.. ...+..+++..++|+++++
T Consensus 58 ~~~~~~~~~~~~~~~~--~~~~--~~~~~-~~~~~~~~~~~~~-~~~~~D~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 131 (394)
T cd03794 58 DGVRVHRVPLPPYKKN--GLLK--RLLNY-LSFALSALLALLK-RRRRPDVIIATSPPLLIALAALLLARLKGAPFVLEV 131 (394)
T ss_pred CCeEEEEEecCCCCcc--chHH--HHHhh-hHHHHHHHHHHHh-cccCCCEEEEcCChHHHHHHHHHHHHhcCCCEEEEe
Confidence 3577777766543210 0000 01111 1222222223221 246899999997432 4556666777799999999
Q ss_pred cCCCccCCCCCchhhhhccccccccchhhHhHHhhhcCCEEEcCCHHHHhhccccccccccccccccccceeeeccCCCC
Q 003962 414 HALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVF 493 (783)
Q Consensus 414 H~l~~~~~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~~~~~~~~v~qy~~~~~f~~p~l~~v~~gi~~~ 493 (783)
|++.............. ...+. .....+...++.+|.++++|+...+.+.. .++.
T Consensus 132 h~~~~~~~~~~~~~~~~-~~~~~--~~~~~~~~~~~~~d~vi~~s~~~~~~~~~--------------------~~~~-- 186 (394)
T cd03794 132 RDLWPESAVALGLLKNG-SLLYR--LLRKLERLIYRRADAIVVISPGMREYLVR--------------------RGVP-- 186 (394)
T ss_pred hhhcchhHHHccCcccc-chHHH--HHHHHHHHHHhcCCEEEEECHHHHHHHHh--------------------cCCC--
Confidence 98654321111000000 00001 11123556789999999999988763321 1222
Q ss_pred CCcEEEecCCccCCCCCCCchHHHhhccCchhhHHhhcChhhhhhhhccccCCCCcEEEEEecccCCCCHHHHHHHHHHh
Q 003962 494 DPKFNIVSPGADMSIYFPYTEEKRRLKSFHPEIEELLYSDVENKEHLCVLKDRNKPILFTMARLDRVKNLTGLVEWYGKN 573 (783)
Q Consensus 494 ~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~~~~~l~~~~~~~~~~gll~~~~k~iIl~vGRL~~~Kgl~~LieA~~~l 573 (783)
..++.++|||+|...+.+......+ ...+. ..+++.|+++|++.+.||++.+++++.++
T Consensus 187 ~~~~~~i~~~~~~~~~~~~~~~~~~-------------------~~~~~--~~~~~~i~~~G~~~~~k~~~~l~~~~~~l 245 (394)
T cd03794 187 PEKISVIPNGVDLELFKPPPADESL-------------------RKELG--LDDKFVVLYAGNIGRAQGLDTLLEAAALL 245 (394)
T ss_pred cCceEEcCCCCCHHHcCCccchhhh-------------------hhccC--CCCcEEEEEecCcccccCHHHHHHHHHHH
Confidence 6789999999998877655432110 11122 45678899999999999999999999999
Q ss_pred HccCCCeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHHcCCCCcEEEccCCCCcCChHHHHHHHHccCcEEEeCCCCCCC
Q 003962 574 AKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAF 653 (783)
Q Consensus 574 ~~~~~~~~LvIVG~g~~~~~~~~ee~~~~~~l~~li~~~~L~~~V~flG~~~~~~~~~el~~~ia~aadvfV~PS~~E~f 653 (783)
.+. ++++|+++|+|+. ...+.+.+...++ ++|.++| .++.+++..+++. +|++++|+..|++
T Consensus 246 ~~~-~~~~l~i~G~~~~-----------~~~~~~~~~~~~~-~~v~~~g----~~~~~~~~~~~~~-~di~i~~~~~~~~ 307 (394)
T cd03794 246 KDR-PDIRFLIVGDGPE-----------KEELKELAKALGL-DNVTFLG----RVPKEELPELLAA-ADVGLVPLKPGPA 307 (394)
T ss_pred hhc-CCeEEEEeCCccc-----------HHHHHHHHHHcCC-CcEEEeC----CCChHHHHHHHHh-hCeeEEeccCccc
Confidence 877 8999999999865 2455555666665 6799999 7778899999996 9999999998875
Q ss_pred -----cHHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHh
Q 003962 654 -----GLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEEK 728 (783)
Q Consensus 654 -----GltvlEAMa~GlPVVat~~GG~~EiI~dg~~G~li~p~d~e~lAeaI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ 728 (783)
|++++|||+||+|||+|+.+|..+++.++.+|++++++|+++++++|.+++ .|++.++++++++++.+.++
T Consensus 308 ~~~~~p~~~~Ea~~~G~pvi~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~i~~~~----~~~~~~~~~~~~~~~~~~~~ 383 (394)
T cd03794 308 FEGVSPSKLFEYMAAGKPVLASVDGESAELVEEAGAGLVVPPGDPEALAAAILELL----DDPEERAEMGENGRRYVEEK 383 (394)
T ss_pred ccccCchHHHHHHHCCCcEEEecCCCchhhhccCCcceEeCCCCHHHHHHHHHHHH----hChHHHHHHHHHHHHHHHHh
Confidence 888999999999999999999999999989999999999999999997665 89999999999999999889
Q ss_pred CCHHHHHHHHH
Q 003962 729 YTWKIYSQRLL 739 (783)
Q Consensus 729 ysw~~~a~~ll 739 (783)
|||+.++++++
T Consensus 384 ~s~~~~~~~~~ 394 (394)
T cd03794 384 FSREKLAERLL 394 (394)
T ss_pred hcHHHHHHhcC
Confidence 99999998863
No 38
>cd03802 GT1_AviGT4_like This family is most closely related to the GT1 family of glycosyltransferases. aviGT4 in Streptomyces viridochromogenes has been shown to be involved in biosynthesis of oligosaccharide antibiotic avilamycin A. Inactivation of aviGT4 resulted in a mutant that accumulated a novel avilamycin derivative lacking the terminal eurekanate residue.
Probab=100.00 E-value=1.9e-33 Score=304.67 Aligned_cols=333 Identities=17% Similarity=0.178 Sum_probs=237.3
Q ss_pred ceEEEEcccccccccCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHHCCCceeeceeEEeCCCCCCCCCcccceeeeecC
Q 003962 255 FNVVILTPHGYFAQDDVLGYPDTGGQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRLLPDAVGTTCGQRLEKVYG 334 (783)
Q Consensus 255 ~rI~iis~h~~~~~~~~lg~p~tGG~~vyv~d~araL~~eLa~~L~~~GheV~~~i~VvT~~~~~~~g~~~~~~~e~i~~ 334 (783)
|||+++++..++- +.|..||.++++. +|++.|.++||+|+ +++...+.... ..
T Consensus 1 MkI~~i~~~~~~~-----~~~~~GG~~~~~~--------~l~~~L~~~g~~V~----v~~~~~~~~~~-----~~----- 53 (335)
T cd03802 1 MRIALVAPPREPV-----PPPAYGGTERVVA--------ALTEGLVARGHEVT----LFASGDSKTAA-----PL----- 53 (335)
T ss_pred CeEEEEcCCcccC-----CCcccCcHHHHHH--------HHHHHHHhcCceEE----EEecCCCCccc-----ce-----
Confidence 7999999776531 3367899999999 66666789999999 88865322110 00
Q ss_pred ccCeEEEEeccCCCccccccccccccchhhHHHHHHHHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHhcCCcEEEEec
Q 003962 335 TKYSDILRVPFRTEKGVVRKWISRFEVWPYLETYTEDVAVEIAKELQGKPDLIIGNYSDGNIVASLLAHKLGVTQCTIAH 414 (783)
Q Consensus 335 ~~~v~Ilrvp~~~~~~~~~~~isr~~i~~~l~~f~~~~~~~l~~~l~~~pDIIh~h~~~~~lva~llar~lgvp~v~t~H 414 (783)
......+.. .............. .....+.. ..+|||||+|.+..... +++..++|+|++.|
T Consensus 54 ---~~~~~~~~~---------~~~~~~~~~~~~~~-~~~~~~~~--~~~~Divh~~~~~~~~~---~~~~~~~~~v~~~h 115 (335)
T cd03802 54 ---VPVVPEPLR---------LDAPGRDRAEAEAL-ALAERALA--AGDFDIVHNHSLHLPLP---FARPLPVPVVTTLH 115 (335)
T ss_pred ---eeccCCCcc---------cccchhhHhhHHHH-HHHHHHHh--cCCCCEEEecCcccchh---hhcccCCCEEEEec
Confidence 000000000 00000000001111 11222222 35799999998877554 56778999999999
Q ss_pred CCCccCCCCCchhhhhccccccccchhhHhHHhhhcCCEEEcCCHHHHhhccccccccccccccccccceeeeccCCCCC
Q 003962 415 ALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFD 494 (783)
Q Consensus 415 ~l~~~~~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~~~~~~~~v~qy~~~~~f~~p~l~~v~~gi~~~~ 494 (783)
+....... + ........+.++++|....... .. .
T Consensus 116 ~~~~~~~~-----~---------------~~~~~~~~~~~~~~s~~~~~~~------------------------~~--~ 149 (335)
T cd03802 116 GPPDPELL-----K---------------LYYAARPDVPFVSISDAQRRPW------------------------PP--L 149 (335)
T ss_pred CCCCcccc-----h---------------HHHhhCcCCeEEEecHHHHhhc------------------------cc--c
Confidence 86432100 0 1134567788899997765410 01 1
Q ss_pred CcEEEecCCccCCCCCCCchHHHhhccCchhhHHhhcChhhhhhhhccccCCCCcEEEEEecccCCCCHHHHHHHHHHhH
Q 003962 495 PKFNIVSPGADMSIYFPYTEEKRRLKSFHPEIEELLYSDVENKEHLCVLKDRNKPILFTMARLDRVKNLTGLVEWYGKNA 574 (783)
Q Consensus 495 ~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~~~~~l~~~~~~~~~~gll~~~~k~iIl~vGRL~~~Kgl~~LieA~~~l~ 574 (783)
.++.+||||+|.+.|.+. ..++..++++||+.+.||++.+++++.+
T Consensus 150 ~~~~vi~ngvd~~~~~~~--------------------------------~~~~~~i~~~Gr~~~~Kg~~~li~~~~~-- 195 (335)
T cd03802 150 PWVATVHNGIDLDDYPFR--------------------------------GPKGDYLLFLGRISPEKGPHLAIRAARR-- 195 (335)
T ss_pred cccEEecCCcChhhCCCC--------------------------------CCCCCEEEEEEeeccccCHHHHHHHHHh--
Confidence 578899999999877551 2356689999999999999999999764
Q ss_pred ccCCCeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHHcC-CCCcEEEccCCCCcCChHHHHHHHHccCcEEEeCCC-CCC
Q 003962 575 KLRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYK-LNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPAL-YEA 652 (783)
Q Consensus 575 ~~~~~~~LvIVG~g~~~~~~~~ee~~~~~~l~~li~~~~-L~~~V~flG~~~~~~~~~el~~~ia~aadvfV~PS~-~E~ 652 (783)
.+++|+|+|+++.. ..+...+.+.. +.++|.|+| .++..++..+++. +|++|+||. .|+
T Consensus 196 ---~~~~l~i~G~~~~~-----------~~~~~~~~~~~~~~~~v~~~G----~~~~~~~~~~~~~-~d~~v~ps~~~E~ 256 (335)
T cd03802 196 ---AGIPLKLAGPVSDP-----------DYFYREIAPELLDGPDIEYLG----EVGGAEKAELLGN-ARALLFPILWEEP 256 (335)
T ss_pred ---cCCeEEEEeCCCCH-----------HHHHHHHHHhcccCCcEEEeC----CCCHHHHHHHHHh-CcEEEeCCcccCC
Confidence 36899999999652 23333333332 568999999 7777899999995 999999998 599
Q ss_pred CcHHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhCCHH
Q 003962 653 FGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEEKYTWK 732 (783)
Q Consensus 653 fGltvlEAMa~GlPVVat~~GG~~EiI~dg~~G~li~p~d~e~lAeaI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~ 732 (783)
||++++|||+||+|||+|+.||..|++.++.+|+++++ +++++++|.++. .++ .+++++++.++|||+
T Consensus 257 ~~~~~lEAma~G~PvI~~~~~~~~e~i~~~~~g~l~~~--~~~l~~~l~~l~----~~~------~~~~~~~~~~~~s~~ 324 (335)
T cd03802 257 FGLVMIEAMACGTPVIAFRRGAVPEVVEDGVTGFLVDS--VEELAAAVARAD----RLD------RAACRRRAERRFSAA 324 (335)
T ss_pred cchHHHHHHhcCCCEEEeCCCCchhheeCCCcEEEeCC--HHHHHHHHHHHh----ccH------HHHHHHHHHHhCCHH
Confidence 99999999999999999999999999999999999985 999999996653 332 256788888999999
Q ss_pred HHHHHHHHHHH
Q 003962 733 IYSQRLLTLTG 743 (783)
Q Consensus 733 ~~a~~ll~ly~ 743 (783)
.++++|+++|+
T Consensus 325 ~~~~~~~~~y~ 335 (335)
T cd03802 325 RMVDDYLALYR 335 (335)
T ss_pred HHHHHHHHHhC
Confidence 99999999884
No 39
>cd03801 GT1_YqgM_like This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold.
Probab=100.00 E-value=3.9e-33 Score=299.53 Aligned_cols=373 Identities=23% Similarity=0.337 Sum_probs=271.7
Q ss_pred eEEEEcccccccccCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHHCCCceeeceeEEeCCCCCCCCCcccceeeeecCc
Q 003962 256 NVVILTPHGYFAQDDVLGYPDTGGQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRLLPDAVGTTCGQRLEKVYGT 335 (783)
Q Consensus 256 rI~iis~h~~~~~~~~lg~p~tGG~~vyv~d~araL~~eLa~~L~~~GheV~~~i~VvT~~~~~~~g~~~~~~~e~i~~~ 335 (783)
||+++++... |..||...++. .|++.|.+.||+|. +++.......... ....
T Consensus 1 kI~ii~~~~~---------~~~~G~~~~~~--------~l~~~L~~~g~~v~----i~~~~~~~~~~~~------~~~~- 52 (374)
T cd03801 1 KILLVTPEYP---------PSVGGAERHVL--------ELARALAARGHEVT----VLTPGDGGLPDEE------EVGG- 52 (374)
T ss_pred CeeEEecccC---------CccCcHhHHHH--------HHHHHHHhcCceEE----EEecCCCCCCcee------eecC-
Confidence 6889987654 23689999999 67777788999999 8887643321110 0000
Q ss_pred cCeEEEEeccCCCccccccccccccchhhHHHHHHHHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHhcCCcEEEEecC
Q 003962 336 KYSDILRVPFRTEKGVVRKWISRFEVWPYLETYTEDVAVEIAKELQGKPDLIIGNYSDGNIVASLLAHKLGVTQCTIAHA 415 (783)
Q Consensus 336 ~~v~Ilrvp~~~~~~~~~~~isr~~i~~~l~~f~~~~~~~l~~~l~~~pDIIh~h~~~~~lva~llar~lgvp~v~t~H~ 415 (783)
......+... ..........+... ...+.. ..+||+||++.+.........++..++|++++.|+
T Consensus 53 --~~~~~~~~~~----------~~~~~~~~~~~~~~-~~~~~~--~~~~Dii~~~~~~~~~~~~~~~~~~~~~~i~~~h~ 117 (374)
T cd03801 53 --IVVVRPPPLL----------RVRRLLLLLLLALR-LRRLLR--RERFDVVHAHDWLALLAAALAARLLGIPLVLTVHG 117 (374)
T ss_pred --cceecCCccc----------ccchhHHHHHHHHH-HHHHhh--hcCCcEEEEechhHHHHHHHHHHhcCCcEEEEecc
Confidence 0000000000 00000011111112 222222 24799999998877555557778889999999998
Q ss_pred CCccCCCCCchhhhhccccccccchhhHhHHhhhcCCEEEcCCHHHHhhccccccccccccccccccceeeeccCCCCCC
Q 003962 416 LEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDP 495 (783)
Q Consensus 416 l~~~~~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~~~~~~~~v~qy~~~~~f~~p~l~~v~~gi~~~~~ 495 (783)
......... ...............++.+|.+++.|....+.+.+.. +.. ..
T Consensus 118 ~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~d~~i~~s~~~~~~~~~~~-------------------~~~--~~ 168 (374)
T cd03801 118 LEFGRPGNE--------LGLLLKLARALERRALRRADRIIAVSEATREELRELG-------------------GVP--PE 168 (374)
T ss_pred chhhccccc--------hhHHHHHHHHHHHHHHHhCCEEEEecHHHHHHHHhcC-------------------CCC--CC
Confidence 754332111 0000011112355678999999999988776433321 111 35
Q ss_pred cEEEecCCccCCCCCCCchHHHhhccCchhhHHhhcChhhhhhhhccccCCCCcEEEEEecccCCCCHHHHHHHHHHhHc
Q 003962 496 KFNIVSPGADMSIYFPYTEEKRRLKSFHPEIEELLYSDVENKEHLCVLKDRNKPILFTMARLDRVKNLTGLVEWYGKNAK 575 (783)
Q Consensus 496 k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~~~~~l~~~~~~~~~~gll~~~~k~iIl~vGRL~~~Kgl~~LieA~~~l~~ 575 (783)
++.++|||+|...+.+.. ...+ ..... ..+++.|+++|++.+.||++.+++++..+.+
T Consensus 169 ~~~~i~~~~~~~~~~~~~-~~~~-------------------~~~~~--~~~~~~i~~~g~~~~~k~~~~~i~~~~~~~~ 226 (374)
T cd03801 169 KITVIPNGVDTERFRPAP-RAAR-------------------RRLGI--PEDEPVILFVGRLVPRKGVDLLLEALAKLRK 226 (374)
T ss_pred cEEEecCcccccccCccc-hHHH-------------------hhcCC--cCCCeEEEEecchhhhcCHHHHHHHHHHHhh
Confidence 899999999998776543 1110 11121 4567899999999999999999999999988
Q ss_pred cCCCeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHHcCCCCcEEEccCCCCcCChHHHHHHHHccCcEEEeCCCCCCCcH
Q 003962 576 LRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGL 655 (783)
Q Consensus 576 ~~~~~~LvIVG~g~~~~~~~~ee~~~~~~l~~li~~~~L~~~V~flG~~~~~~~~~el~~~ia~aadvfV~PS~~E~fGl 655 (783)
..++++|+++|++. ....+.+.+++++..++|.++| .++.+++..+++. +|++++|+..|++|+
T Consensus 227 ~~~~~~l~i~G~~~-----------~~~~~~~~~~~~~~~~~v~~~g----~~~~~~~~~~~~~-~di~i~~~~~~~~~~ 290 (374)
T cd03801 227 EYPDVRLVIVGDGP-----------LREELEALAAELGLGDRVTFLG----FVPDEDLPALYAA-ADVFVLPSLYEGFGL 290 (374)
T ss_pred hcCCeEEEEEeCcH-----------HHHHHHHHHHHhCCCcceEEEe----ccChhhHHHHHHh-cCEEEecchhccccc
Confidence 88899999999774 3466777788888999999999 7777899999996 999999999999999
Q ss_pred HHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhCCHHHHH
Q 003962 656 TVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEEKYTWKIYS 735 (783)
Q Consensus 656 tvlEAMa~GlPVVat~~GG~~EiI~dg~~G~li~p~d~e~lAeaI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~~~a 735 (783)
+++|||+||+|||+++.++..|++.++.+|+++++.|+++++++|.+++ .|++.++++++++++.+.+.|||+.++
T Consensus 291 ~~~Ea~~~g~pvI~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~i~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~ 366 (374)
T cd03801 291 VLLEAMAAGLPVVASDVGGIPEVVEDGETGLLVPPGDPEALAEAILRLL----DDPELRRRLGEAARERVAERFSWDRVA 366 (374)
T ss_pred hHHHHHHcCCcEEEeCCCChhHHhcCCcceEEeCCCCHHHHHHHHHHHH----cChHHHHHHHHHHHHHHHHhcCHHHHH
Confidence 9999999999999999999999999999999999999999999996665 899999999999999999999999999
Q ss_pred HHHHHHH
Q 003962 736 QRLLTLT 742 (783)
Q Consensus 736 ~~ll~ly 742 (783)
+++.++|
T Consensus 367 ~~~~~~~ 373 (374)
T cd03801 367 ARTEEVY 373 (374)
T ss_pred HHHHHhh
Confidence 9999876
No 40
>cd03814 GT1_like_2 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=100.00 E-value=1.5e-33 Score=306.32 Aligned_cols=363 Identities=20% Similarity=0.277 Sum_probs=259.8
Q ss_pred eEEEEcccccccccCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHHCCCceeeceeEEeCCCCCCCCCcccceeeeecCc
Q 003962 256 NVVILTPHGYFAQDDVLGYPDTGGQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRLLPDAVGTTCGQRLEKVYGT 335 (783)
Q Consensus 256 rI~iis~h~~~~~~~~lg~p~tGG~~vyv~d~araL~~eLa~~L~~~GheV~~~i~VvT~~~~~~~g~~~~~~~e~i~~~ 335 (783)
||+++++... |..||.+.++. .|+++|+++||+|+ ++|......... ..
T Consensus 1 kIl~i~~~~~---------p~~~G~~~~~~--------~l~~~L~~~g~~v~----~~~~~~~~~~~~--~~-------- 49 (364)
T cd03814 1 RIAIVTDTFL---------PQVNGVVRTLQ--------RLVEHLRARGHEVL----VIAPGPFRESEG--PA-------- 49 (364)
T ss_pred CeEEEecccC---------ccccceehHHH--------HHHHHHHHCCCEEE----EEeCCchhhccC--CC--------
Confidence 6899986664 44589999999 77777899999999 888754321110 00
Q ss_pred cCeEEEEeccCCCccccccccccccchhhHHHHHHHHHHHHHHHcCCCceEEEEcCCCc-hHHHHHHHHhcCCcEEEEec
Q 003962 336 KYSDILRVPFRTEKGVVRKWISRFEVWPYLETYTEDVAVEIAKELQGKPDLIIGNYSDG-NIVASLLAHKLGVTQCTIAH 414 (783)
Q Consensus 336 ~~v~Ilrvp~~~~~~~~~~~isr~~i~~~l~~f~~~~~~~l~~~l~~~pDIIh~h~~~~-~lva~llar~lgvp~v~t~H 414 (783)
....+...+......+ +.... ...... .... ..+||+||++.... +..+..++++.++|++.+.|
T Consensus 50 ~~~~~~~~~~~~~~~~------~~~~~-----~~~~~~-~~~~--~~~pdii~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 115 (364)
T cd03814 50 RVVPVPSVPLPGYPEI------RLALP-----PRRRVR-RLLD--AFAPDVVHIATPGPLGLAALRAARRLGIPVVTSYH 115 (364)
T ss_pred CceeecccccCcccce------Eeccc-----chhhHH-HHHH--hcCCCEEEEeccchhhHHHHHHHHHcCCCEEEEEe
Confidence 1122222221111000 00000 001111 1122 34799999886654 56677778889999999999
Q ss_pred CCCccCCCCCchhhhhccccccccchhhHhHHhhhcCCEEEcCCHHHHhhccccccccccccccccccceeeeccCCCCC
Q 003962 415 ALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFD 494 (783)
Q Consensus 415 ~l~~~~~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~~~~~~~~v~qy~~~~~f~~p~l~~v~~gi~~~~ 494 (783)
+......... .............+...+.+|.+++.|....+.... .. .
T Consensus 116 ~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~d~i~~~s~~~~~~~~~----------------------~~--~ 164 (364)
T cd03814 116 TDFPEYLRYY-------GLGPLSWLAWAYLRWFHNRADRVLVPSPSLADELRA----------------------RG--F 164 (364)
T ss_pred cChHHHhhhc-------ccchHhHhhHHHHHHHHHhCCEEEeCCHHHHHHHhc----------------------cC--C
Confidence 7533111000 000000000122345678999999999877652111 11 4
Q ss_pred CcEEEecCCccCCCCCCCchHHHhhccCchhhHHhhcChhhhhhhhccccCCCCcEEEEEecccCCCCHHHHHHHHHHhH
Q 003962 495 PKFNIVSPGADMSIYFPYTEEKRRLKSFHPEIEELLYSDVENKEHLCVLKDRNKPILFTMARLDRVKNLTGLVEWYGKNA 574 (783)
Q Consensus 495 ~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~~~~~l~~~~~~~~~~gll~~~~k~iIl~vGRL~~~Kgl~~LieA~~~l~ 574 (783)
.++.+++||+|.+.|.|....... ++.++ +.+++.++++||+.+.||++.+++++.++.
T Consensus 165 ~~~~~~~~g~~~~~~~~~~~~~~~------------------~~~~~---~~~~~~i~~~G~~~~~k~~~~~i~~~~~l~ 223 (364)
T cd03814 165 RRVRLWPRGVDTELFHPRRRDEAL------------------RARLG---PPDRPVLLYVGRLAPEKNLEALLDADLPLR 223 (364)
T ss_pred CceeecCCCccccccCcccccHHH------------------HHHhC---CCCCeEEEEEeccccccCHHHHHHHHHHhh
Confidence 578899999999888765432211 11222 345678999999999999999999999998
Q ss_pred ccCCCeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHHcCCCCcEEEccCCCCcCChHHHHHHHHccCcEEEeCCCCCCCc
Q 003962 575 KLRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFG 654 (783)
Q Consensus 575 ~~~~~~~LvIVG~g~~~~~~~~ee~~~~~~l~~li~~~~L~~~V~flG~~~~~~~~~el~~~ia~aadvfV~PS~~E~fG 654 (783)
+. ++++|+|+|+++.. ..++ +..++|.|+| .++.+++..+++. +|++++||..|+||
T Consensus 224 ~~-~~~~l~i~G~~~~~-----------~~~~------~~~~~v~~~g----~~~~~~~~~~~~~-~d~~l~~s~~e~~~ 280 (364)
T cd03814 224 RR-PPVRLVIVGDGPAR-----------ARLE------ARYPNVHFLG----FLDGEELAAAYAS-ADVFVFPSRTETFG 280 (364)
T ss_pred hc-CCceEEEEeCCchH-----------HHHh------ccCCcEEEEe----ccCHHHHHHHHHh-CCEEEECcccccCC
Confidence 77 89999999998641 2222 4567899999 6778999999995 99999999999999
Q ss_pred HHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhCCHHHH
Q 003962 655 LTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEEKYTWKIY 734 (783)
Q Consensus 655 ltvlEAMa~GlPVVat~~GG~~EiI~dg~~G~li~p~d~e~lAeaI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~~~ 734 (783)
++++|||+||+|||+++.|+..|++.++.+|+++++.|.++++++|.+++ .|++.+++|++++++.+ ++|||+.+
T Consensus 281 ~~~lEa~a~g~PvI~~~~~~~~~~i~~~~~g~~~~~~~~~~l~~~i~~l~----~~~~~~~~~~~~~~~~~-~~~~~~~~ 355 (364)
T cd03814 281 LVVLEAMASGLPVVAPDAGGPADIVTDGENGLLVEPGDAEAFAAALAALL----ADPELRRRMAARARAEA-ERRSWEAF 355 (364)
T ss_pred cHHHHHHHcCCCEEEcCCCCchhhhcCCcceEEcCCCCHHHHHHHHHHHH----cCHHHHHHHHHHHHHHH-hhcCHHHH
Confidence 99999999999999999999999999999999999999999999997665 89999999999999998 88999999
Q ss_pred HHHHHHHHH
Q 003962 735 SQRLLTLTG 743 (783)
Q Consensus 735 a~~ll~ly~ 743 (783)
+++++++|+
T Consensus 356 ~~~~~~~~~ 364 (364)
T cd03814 356 LDNLLEAYR 364 (364)
T ss_pred HHHHHHhhC
Confidence 999999873
No 41
>cd04951 GT1_WbdM_like This family is most closely related to the GT1 family of glycosyltransferases and is named after WbdM in Escherichia coli. In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have
Probab=100.00 E-value=3.7e-33 Score=304.78 Aligned_cols=281 Identities=22% Similarity=0.270 Sum_probs=218.9
Q ss_pred CCceEEEEcCCCchHHHHHHHHhc-CCcEEEEecCCCccCCCCCchhhhhccccccccchhhHhHHhhhcCCEEEcCCHH
Q 003962 382 GKPDLIIGNYSDGNIVASLLAHKL-GVTQCTIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTFQ 460 (783)
Q Consensus 382 ~~pDIIh~h~~~~~lva~llar~l-gvp~v~t~H~l~~~~~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~ 460 (783)
.+||+||+|....+..+.+++... ++|++++.|+..... .+. . .........++.++++|..
T Consensus 78 ~~pdiv~~~~~~~~~~~~l~~~~~~~~~~v~~~h~~~~~~------~~~------~-----~~~~~~~~~~~~~~~~s~~ 140 (360)
T cd04951 78 FKPDVVHAHMFHANIFARLLRLFLPSPPLICTAHSKNEGG------RLR------M-----LAYRLTDFLSDLTTNVSKE 140 (360)
T ss_pred cCCCEEEEcccchHHHHHHHHhhCCCCcEEEEeeccCchh------HHH------H-----HHHHHHhhccCceEEEcHH
Confidence 479999999887766666665543 678999999753211 000 0 1112234456777888876
Q ss_pred HHhhccccccccccccccccccceeeeccCCCCCCcEEEecCCccCCCCCCCchHHHhhccCchhhHHhhcChhhhhhhh
Q 003962 461 EIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEEKRRLKSFHPEIEELLYSDVENKEHL 540 (783)
Q Consensus 461 ~~~~~~~~v~qy~~~~~f~~p~l~~v~~gi~~~~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~~~~~l~~~~~~~~~~ 540 (783)
..+.+.+. .+++ ..++.+||||+|...|.+...... ..++.+
T Consensus 141 ~~~~~~~~-------------------~~~~--~~~~~~i~ng~~~~~~~~~~~~~~-----------------~~~~~~ 182 (360)
T cd04951 141 ALDYFIAS-------------------KAFN--ANKSFVVYNGIDTDRFRKDPARRL-----------------KIRNAL 182 (360)
T ss_pred HHHHHHhc-------------------cCCC--cccEEEEccccchhhcCcchHHHH-----------------HHHHHc
Confidence 65532211 1122 578999999999887765433221 123455
Q ss_pred ccccCCCCcEEEEEecccCCCCHHHHHHHHHHhHccCCCeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHHcCCCCcEEE
Q 003962 541 CVLKDRNKPILFTMARLDRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLNGQFRW 620 (783)
Q Consensus 541 gll~~~~k~iIl~vGRL~~~Kgl~~LieA~~~l~~~~~~~~LvIVG~g~~~~~~~~ee~~~~~~l~~li~~~~L~~~V~f 620 (783)
++ ++++++++++||+.+.||++.+++++.++.+..++++|+|+|+|+. .+++.+.++++++.++|.|
T Consensus 183 ~~--~~~~~~~l~~g~~~~~kg~~~li~a~~~l~~~~~~~~l~i~G~g~~-----------~~~~~~~~~~~~~~~~v~~ 249 (360)
T cd04951 183 GV--KNDTFVILAVGRLVEAKDYPNLLKAFAKLLSDYLDIKLLIAGDGPL-----------RATLERLIKALGLSNRVKL 249 (360)
T ss_pred Cc--CCCCEEEEEEeeCchhcCcHHHHHHHHHHHhhCCCeEEEEEcCCCc-----------HHHHHHHHHhcCCCCcEEE
Confidence 66 5678899999999999999999999999988888999999999865 3567788888888899999
Q ss_pred ccCCCCcCChHHHHHHHHccCcEEEeCCCCCCCcHHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHHHHHHHH
Q 003962 621 ISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEIL 700 (783)
Q Consensus 621 lG~~~~~~~~~el~~~ia~aadvfV~PS~~E~fGltvlEAMa~GlPVVat~~GG~~EiI~dg~~G~li~p~d~e~lAeaI 700 (783)
+|.+ +++..+++. +|++|+||..|+||++++|||+||+|||+++.|+..|++++ +|+.++++|+++++++|
T Consensus 250 ~g~~------~~~~~~~~~-ad~~v~~s~~e~~~~~~~Ea~a~G~PvI~~~~~~~~e~i~~--~g~~~~~~~~~~~~~~i 320 (360)
T cd04951 250 LGLR------DDIAAYYNA-ADLFVLSSAWEGFGLVVAEAMACELPVVATDAGGVREVVGD--SGLIVPISDPEALANKI 320 (360)
T ss_pred eccc------ccHHHHHHh-hceEEecccccCCChHHHHHHHcCCCEEEecCCChhhEecC--CceEeCCCCHHHHHHHH
Confidence 9943 357778885 99999999999999999999999999999999999999977 79999999999999999
Q ss_pred HHHHHHhhCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Q 003962 701 VDFFEKCKADPSYWDKISLGGLKRIEEKYTWKIYSQRLLTLTG 743 (783)
Q Consensus 701 ~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~~~a~~ll~ly~ 743 (783)
.++++ .++..++.++++ ++.+.++|||+.++++|+++|+
T Consensus 321 ~~ll~---~~~~~~~~~~~~-~~~~~~~~s~~~~~~~~~~~y~ 359 (360)
T cd04951 321 DEILK---MSGEERDIIGAR-RERIVKKFSINSIVQQWLTLYT 359 (360)
T ss_pred HHHHh---CCHHHHHHHHHH-HHHHHHhcCHHHHHHHHHHHhh
Confidence 77652 577777777777 8888899999999999999985
No 42
>cd03822 GT1_ecORF704_like This family is most closely related to the GT1 family of glycosyltransferases. ORF704 in E. coli has been shown to be involved in the biosynthesis of O-specific mannose homopolysaccharides.
Probab=100.00 E-value=6.9e-33 Score=301.72 Aligned_cols=357 Identities=17% Similarity=0.216 Sum_probs=250.5
Q ss_pred eEEEEcccccccccCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHHCCCceeeceeEEeCCCCCCCCCcccceeeeecCc
Q 003962 256 NVVILTPHGYFAQDDVLGYPDTGGQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRLLPDAVGTTCGQRLEKVYGT 335 (783)
Q Consensus 256 rI~iis~h~~~~~~~~lg~p~tGG~~vyv~d~araL~~eLa~~L~~~GheV~~~i~VvT~~~~~~~g~~~~~~~e~i~~~ 335 (783)
||++++++. |..||.+.++. +|+++|.+.||+|+ +++............ ..
T Consensus 1 kI~~v~~~~----------~~~gG~~~~~~--------~l~~~L~~~g~~v~----v~~~~~~~~~~~~~~-------~~ 51 (366)
T cd03822 1 RIALVSPYP----------PRKCGIATFTT--------DLVNALSARGPDVL----VVSVAALYPSLLYGG-------EQ 51 (366)
T ss_pred CeEEecCCC----------CCCCcHHHHHH--------HHHHHhhhcCCeEE----EEEeecccCcccCCC-------cc
Confidence 689998653 34799999999 67777899999999 776543221110000 00
Q ss_pred cCeEEEEeccCCCccccccccccccchhhHHHHHHHHHHHHHHHcCCCceEEEEcCCCc---hHHHHH---HHHhcCCcE
Q 003962 336 KYSDILRVPFRTEKGVVRKWISRFEVWPYLETYTEDVAVEIAKELQGKPDLIIGNYSDG---NIVASL---LAHKLGVTQ 409 (783)
Q Consensus 336 ~~v~Ilrvp~~~~~~~~~~~isr~~i~~~l~~f~~~~~~~l~~~l~~~pDIIh~h~~~~---~lva~l---lar~lgvp~ 409 (783)
...... .......+ .... .... ..+||+||++.+.+ ...... ..+..++|+
T Consensus 52 ~~~~~~---------------~~~~~~~~-----~~~~-~~~~--~~~~dii~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 108 (366)
T cd03822 52 EVVRVI---------------VLDNPLDY-----RRAA-RAIR--LSGPDVVVIQHEYGIFGGEAGLYLLLLLRGLGIPV 108 (366)
T ss_pred cceeee---------------ecCCchhH-----HHHH-HHHh--hcCCCEEEEeeccccccchhhHHHHHHHhhcCCCE
Confidence 000000 00011111 1112 2222 24799999877432 122222 224489999
Q ss_pred EEEecCCCccCCCCCchhhhhccccccccchhhHhHHhhhcCCEEEcCCHHHHhhccccccccccccccccccceeeecc
Q 003962 410 CTIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHG 489 (783)
Q Consensus 410 v~t~H~l~~~~~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~~~~~~~~v~qy~~~~~f~~p~l~~v~~g 489 (783)
|++.|+.... ....+ ........++.+|.|+++|..... +..
T Consensus 109 i~~~h~~~~~----~~~~~-----------~~~~~~~~~~~~d~ii~~s~~~~~---~~~-------------------- 150 (366)
T cd03822 109 VVTLHTVLLH----EPRPG-----------DRALLRLLLRRADAVIVMSSELLR---ALL-------------------- 150 (366)
T ss_pred EEEEecCCcc----ccchh-----------hhHHHHHHHhcCCEEEEeeHHHHH---HHH--------------------
Confidence 9999986110 00000 012234568899999999733322 111
Q ss_pred CCCCCCcEEEecCCccCCCCCCCchHHHhhccCchhhHHhhcChhhhhhhhccccCCCCcEEEEEecccCCCCHHHHHHH
Q 003962 490 IDVFDPKFNIVSPGADMSIYFPYTEEKRRLKSFHPEIEELLYSDVENKEHLCVLKDRNKPILFTMARLDRVKNLTGLVEW 569 (783)
Q Consensus 490 i~~~~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~~~~~l~~~~~~~~~~gll~~~~k~iIl~vGRL~~~Kgl~~LieA 569 (783)
......++.++|||+|...+.+..... ..+. ..++++|+++||+.+.||++.+++|
T Consensus 151 ~~~~~~~~~~i~~~~~~~~~~~~~~~~----------------------~~~~--~~~~~~i~~~G~~~~~K~~~~ll~a 206 (366)
T cd03822 151 LRAYPEKIAVIPHGVPDPPAEPPESLK----------------------ALGG--LDGRPVLLTFGLLRPYKGLELLLEA 206 (366)
T ss_pred hhcCCCcEEEeCCCCcCcccCCchhhH----------------------hhcC--CCCCeEEEEEeeccCCCCHHHHHHH
Confidence 011146899999999987665433211 1111 4567899999999999999999999
Q ss_pred HHHhHccCCCeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHHcCCCCcEEEccCCCCcCChHHHHHHHHccCcEEEeCCC
Q 003962 570 YGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPAL 649 (783)
Q Consensus 570 ~~~l~~~~~~~~LvIVG~g~~~~~~~~ee~~~~~~l~~li~~~~L~~~V~flG~~~~~~~~~el~~~ia~aadvfV~PS~ 649 (783)
+.++.+..++++|+|+|++..... .......++++++++.++|.|+|. .++.+++..+++. +|++++||.
T Consensus 207 ~~~~~~~~~~~~l~i~G~~~~~~~------~~~~~~~~~i~~~~~~~~v~~~~~---~~~~~~~~~~~~~-ad~~v~ps~ 276 (366)
T cd03822 207 LPLLVAKHPDVRLLVAGETHPDLE------RYRGEAYALAERLGLADRVIFINR---YLPDEELPELFSA-ADVVVLPYR 276 (366)
T ss_pred HHHHHhhCCCeEEEEeccCccchh------hhhhhhHhHHHhcCCCCcEEEecC---cCCHHHHHHHHhh-cCEEEeccc
Confidence 999998888999999999865210 000111145788899999999981 3778999999996 999999999
Q ss_pred CC--CCcHHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHH
Q 003962 650 YE--AFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEE 727 (783)
Q Consensus 650 ~E--~fGltvlEAMa~GlPVVat~~GG~~EiI~dg~~G~li~p~d~e~lAeaI~~~l~~l~~dp~~~~~ms~~a~~~v~~ 727 (783)
+| +||++++|||+||+|||+|+.|| .+.+.++.+|++++++|+++++++|..++ +|++.+.+|++++++.+.+
T Consensus 277 ~e~~~~~~~~~Ea~a~G~PvI~~~~~~-~~~i~~~~~g~~~~~~d~~~~~~~l~~l~----~~~~~~~~~~~~~~~~~~~ 351 (366)
T cd03822 277 SADQTQSGVLAYAIGFGKPVISTPVGH-AEEVLDGGTGLLVPPGDPAALAEAIRRLL----ADPELAQALRARAREYARA 351 (366)
T ss_pred ccccccchHHHHHHHcCCCEEecCCCC-hheeeeCCCcEEEcCCCHHHHHHHHHHHH----cChHHHHHHHHHHHHHHhh
Confidence 99 99999999999999999999999 77778888999999999999999996665 8999999999999999966
Q ss_pred hCCHHHHHHHHHHHH
Q 003962 728 KYTWKIYSQRLLTLT 742 (783)
Q Consensus 728 ~ysw~~~a~~ll~ly 742 (783)
|||+.+++++.++|
T Consensus 352 -~s~~~~~~~~~~~~ 365 (366)
T cd03822 352 -MSWERVAERYLRLL 365 (366)
T ss_pred -CCHHHHHHHHHHHh
Confidence 99999999999987
No 43
>cd03817 GT1_UGDG_like This family is most closely related to the GT1 family of glycosyltransferases. UDP-glucose-diacylglycerol glucosyltransferase (UGDG; also known as 1,2-diacylglycerol 3-glucosyltransferase) catalyzes the transfer of glucose from UDP-glucose to 1,2-diacylglycerol forming 3-D-glucosyl-1,2-diacylglycerol.
Probab=100.00 E-value=9.9e-33 Score=299.57 Aligned_cols=370 Identities=20% Similarity=0.318 Sum_probs=262.8
Q ss_pred eEEEEcccccccccCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHHCCCceeeceeEEeCCCCCCCCCcccceeeeecCc
Q 003962 256 NVVILTPHGYFAQDDVLGYPDTGGQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRLLPDAVGTTCGQRLEKVYGT 335 (783)
Q Consensus 256 rI~iis~h~~~~~~~~lg~p~tGG~~vyv~d~araL~~eLa~~L~~~GheV~~~i~VvT~~~~~~~g~~~~~~~e~i~~~ 335 (783)
||++++...+ |..||...++. +|+++|.++||+|+ ++|...+...... ..
T Consensus 1 kil~~~~~~~---------p~~~G~~~~~~--------~l~~~L~~~g~~v~----v~~~~~~~~~~~~---------~~ 50 (374)
T cd03817 1 KIGIFTDTYL---------PQVNGVATSIR--------RLAEELEKRGHEVY----VVAPSYPGAPEEE---------EV 50 (374)
T ss_pred CeeEeehhcc---------CCCCCeehHHH--------HHHHHHHHcCCeEE----EEeCCCCCCCccc---------cc
Confidence 6888886654 56799999998 77777899999999 8887644321110 00
Q ss_pred cCeEEEEeccCCCccccccccccccchhhHHHHHHHHHHHHHHHcCCCceEEEEcCCCc-hHHHHHHHHhcCCcEEEEec
Q 003962 336 KYSDILRVPFRTEKGVVRKWISRFEVWPYLETYTEDVAVEIAKELQGKPDLIIGNYSDG-NIVASLLAHKLGVTQCTIAH 414 (783)
Q Consensus 336 ~~v~Ilrvp~~~~~~~~~~~isr~~i~~~l~~f~~~~~~~l~~~l~~~pDIIh~h~~~~-~lva~llar~lgvp~v~t~H 414 (783)
......+.+... ..+... . ..+... ...... ..+||+||++.+.. +..+..++++.++|++.+.|
T Consensus 51 ~~~~~~~~~~~~--------~~~~~~-~--~~~~~~-~~~~~~--~~~~Div~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 116 (374)
T cd03817 51 VVVRPFRVPTFK--------YPDFRL-P--LPIPRA-LIIILK--ELGPDIVHTHTPFSLGLLGLRVARKLGIPVVATYH 116 (374)
T ss_pred ccccccccccch--------hhhhhc-c--ccHHHH-HHHHHh--hcCCCEEEECCchhhhhHHHHHHHHcCCCEEEEec
Confidence 011111111100 000000 0 011111 112222 35799999987644 55677788889999999999
Q ss_pred CCCccCCCCCchhhhhccccccccchh-hHhHHhhhcCCEEEcCCHHHHhhccccccccccccccccccceeeeccCCCC
Q 003962 415 ALEKTKYPDSDIYWKNLDDKYHFSCQF-TADLIAMNHTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVF 493 (783)
Q Consensus 415 ~l~~~~~~~s~~~~~~~~~~y~f~~~~-~~e~~a~~~AD~IIt~S~~~~~~~~~~v~qy~~~~~f~~p~l~~v~~gi~~~ 493 (783)
+..... ... ............. ..+...++.+|.++++|....+.+.+. +.
T Consensus 117 ~~~~~~-~~~----~~~~~~~~~~~~~~~~~~~~~~~~d~i~~~s~~~~~~~~~~--------------------~~--- 168 (374)
T cd03817 117 TMYEDY-THY----VPLGRLLARAVVRRKLSRRFYNRCDAVIAPSEKIADLLREY--------------------GV--- 168 (374)
T ss_pred CCHHHH-HHH----HhcccchhHHHHHHHHHHHHhhhCCEEEeccHHHHHHHHhc--------------------CC---
Confidence 854311 000 0000000000011 235567889999999998765532211 12
Q ss_pred CCcEEEecCCccCCCCCCCchHHHhhccCchhhHHhhcChhhhhhhhccccCCCCcEEEEEecccCCCCHHHHHHHHHHh
Q 003962 494 DPKFNIVSPGADMSIYFPYTEEKRRLKSFHPEIEELLYSDVENKEHLCVLKDRNKPILFTMARLDRVKNLTGLVEWYGKN 573 (783)
Q Consensus 494 ~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~~~~~l~~~~~~~~~~gll~~~~k~iIl~vGRL~~~Kgl~~LieA~~~l 573 (783)
..++.++|||+|...+.+...... ++.++. +.+++.|+++|++.+.||++.+++++.++
T Consensus 169 ~~~~~vi~~~~~~~~~~~~~~~~~-------------------~~~~~~--~~~~~~i~~~G~~~~~k~~~~l~~~~~~~ 227 (374)
T cd03817 169 KRPIEVIPTGIDLDRFEPVDGDDE-------------------RRKLGI--PEDEPVLLYVGRLAKEKNIDFLIRAFARL 227 (374)
T ss_pred CCceEEcCCccchhccCccchhHH-------------------HHhcCC--CCCCeEEEEEeeeecccCHHHHHHHHHHH
Confidence 346899999999988766543221 122333 55678899999999999999999999999
Q ss_pred HccCCCeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHHcCCCCcEEEccCCCCcCChHHHHHHHHccCcEEEeCCCCCCC
Q 003962 574 AKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAF 653 (783)
Q Consensus 574 ~~~~~~~~LvIVG~g~~~~~~~~ee~~~~~~l~~li~~~~L~~~V~flG~~~~~~~~~el~~~ia~aadvfV~PS~~E~f 653 (783)
.+..++++|+++|+++. .+.+.++++++++.++|.|+| .++.+++..+++. +|++++||..|++
T Consensus 228 ~~~~~~~~l~i~G~~~~-----------~~~~~~~~~~~~~~~~v~~~g----~~~~~~~~~~~~~-ad~~l~~s~~e~~ 291 (374)
T cd03817 228 LKEEPDVKLVIVGDGPE-----------REELEELARELGLADRVIFTG----FVPREELPDYYKA-ADLFVFASTTETQ 291 (374)
T ss_pred HHhCCCeEEEEEeCCch-----------HHHHHHHHHHcCCCCcEEEec----cCChHHHHHHHHH-cCEEEecccccCc
Confidence 88778999999999854 356778888889999999999 7778899999996 9999999999999
Q ss_pred cHHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhCCHHH
Q 003962 654 GLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEEKYTWKI 733 (783)
Q Consensus 654 GltvlEAMa~GlPVVat~~GG~~EiI~dg~~G~li~p~d~e~lAeaI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~~ 733 (783)
|++++|||+||+|||+++.|+..|++.++.+|+++++.+. +++++|.+++ +|++.+++|++++++.+.+ ++
T Consensus 292 ~~~~~Ea~~~g~PvI~~~~~~~~~~i~~~~~g~~~~~~~~-~~~~~i~~l~----~~~~~~~~~~~~~~~~~~~-~~--- 362 (374)
T cd03817 292 GLVLLEAMAAGLPVVAVDAPGLPDLVADGENGFLFPPGDE-ALAEALLRLL----QDPELRRRLSKNAEESAEK-FS--- 362 (374)
T ss_pred ChHHHHHHHcCCcEEEeCCCChhhheecCceeEEeCCCCH-HHHHHHHHHH----hChHHHHHHHHHHHHHHHH-HH---
Confidence 9999999999999999999999999999999999998887 8999996655 8999999999999999854 44
Q ss_pred HHHHHHHHHH
Q 003962 734 YSQRLLTLTG 743 (783)
Q Consensus 734 ~a~~ll~ly~ 743 (783)
.++++.++|+
T Consensus 363 ~~~~~~~~~~ 372 (374)
T cd03817 363 FAKKVEKLYE 372 (374)
T ss_pred HHHHHHHHHh
Confidence 5666766664
No 44
>cd03807 GT1_WbnK_like This family is most closely related to the GT1 family of glycosyltransferases. WbnK in Shigella dysenteriae has been shown to be involved in the type 7 O-antigen biosynthesis.
Probab=100.00 E-value=4.8e-33 Score=300.52 Aligned_cols=363 Identities=17% Similarity=0.186 Sum_probs=264.0
Q ss_pred eEEEEcccccccccCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHHCCCceeeceeEEeCCCCCCCCCcccceeeeecCc
Q 003962 256 NVVILTPHGYFAQDDVLGYPDTGGQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRLLPDAVGTTCGQRLEKVYGT 335 (783)
Q Consensus 256 rI~iis~h~~~~~~~~lg~p~tGG~~vyv~d~araL~~eLa~~L~~~GheV~~~i~VvT~~~~~~~g~~~~~~~e~i~~~ 335 (783)
||+++.+-.. .||.+.++. .|++.|.+.|++|. +++....... ..... .
T Consensus 1 ~i~~i~~~~~-----------~gG~~~~~~--------~l~~~l~~~~~~v~----~~~~~~~~~~----~~~~~----~ 49 (365)
T cd03807 1 KVLHVITGLD-----------VGGAERMLV--------RLLKGLDRDRFEHV----VISLTDRGEL----GEELE----E 49 (365)
T ss_pred CeEEEEeecc-----------CccHHHHHH--------HHHHHhhhccceEE----EEecCcchhh----hHHHH----h
Confidence 5777765442 389999999 67777889999999 7775432211 11111 1
Q ss_pred cCeEEEEeccCCCccccccccccccchhhHHHHHHHHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHh-cCCcEEEEec
Q 003962 336 KYSDILRVPFRTEKGVVRKWISRFEVWPYLETYTEDVAVEIAKELQGKPDLIIGNYSDGNIVASLLAHK-LGVTQCTIAH 414 (783)
Q Consensus 336 ~~v~Ilrvp~~~~~~~~~~~isr~~i~~~l~~f~~~~~~~l~~~l~~~pDIIh~h~~~~~lva~llar~-lgvp~v~t~H 414 (783)
.++.+..++.... ...+. +.....+.+. +.+||+||++.......+.+.+.. .++|++.+.|
T Consensus 50 ~~i~v~~~~~~~~----------~~~~~----~~~~~~~~~~---~~~~div~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 112 (365)
T cd03807 50 AGVPVYCLGKRPG----------RPDPG----ALLRLYKLIR---RLRPDVVHTWMYHADLYGGLAARLAGVPPVIWGIR 112 (365)
T ss_pred cCCeEEEEecccc----------cccHH----HHHHHHHHHH---hhCCCEEEeccccccHHHHHHHHhcCCCcEEEEec
Confidence 2455665554321 01111 1112222222 247999999887766666666666 6889999999
Q ss_pred CCCccCCCCCchhhhhccccccccchhhHhHHhhhcCCEEEcCCHHHHhhccccccccccccccccccceeeeccCCCCC
Q 003962 415 ALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFD 494 (783)
Q Consensus 415 ~l~~~~~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~~~~~~~~v~qy~~~~~f~~p~l~~v~~gi~~~~ 494 (783)
+...... .|. ... .........+.+|.++++|....+.+.+. +++ .
T Consensus 113 ~~~~~~~-----~~~--~~~-----~~~~~~~~~~~~~~~i~~s~~~~~~~~~~--------------------~~~--~ 158 (365)
T cd03807 113 HSDLDLG-----KKS--TRL-----VARLRRLLSSFIPLIVANSAAAAEYHQAI--------------------GYP--P 158 (365)
T ss_pred CCccccc-----chh--HhH-----HHHHHHHhccccCeEEeccHHHHHHHHHc--------------------CCC--h
Confidence 8643321 111 000 11123456678899999998776532211 233 6
Q ss_pred CcEEEecCCccCCCCCCCchHHHhhccCchhhHHhhcChhhhhhhhccccCCCCcEEEEEecccCCCCHHHHHHHHHHhH
Q 003962 495 PKFNIVSPGADMSIYFPYTEEKRRLKSFHPEIEELLYSDVENKEHLCVLKDRNKPILFTMARLDRVKNLTGLVEWYGKNA 574 (783)
Q Consensus 495 ~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~~~~~l~~~~~~~~~~gll~~~~k~iIl~vGRL~~~Kgl~~LieA~~~l~ 574 (783)
.++.++|||+|...+.+...... ..++.+++ +++++.|+++||+++.||++.+++++..+.
T Consensus 159 ~~~~vi~~~~~~~~~~~~~~~~~-----------------~~~~~~~~--~~~~~~i~~~G~~~~~K~~~~li~a~~~l~ 219 (365)
T cd03807 159 KKIVVIPNGVDTERFSPDLDARA-----------------RLREELGL--PEDTFLIGIVARLHPQKDHATLLRAAALLL 219 (365)
T ss_pred hheeEeCCCcCHHhcCCcccchH-----------------HHHHhcCC--CCCCeEEEEecccchhcCHHHHHHHHHHHH
Confidence 68999999999887765543221 12244566 567789999999999999999999999998
Q ss_pred ccCCCeEEEEEeCCCCCCCccHHHHHHHHHHHHHHH-HcCCCCcEEEccCCCCcCChHHHHHHHHccCcEEEeCCCCCCC
Q 003962 575 KLRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLID-QYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAF 653 (783)
Q Consensus 575 ~~~~~~~LvIVG~g~~~~~~~~ee~~~~~~l~~li~-~~~L~~~V~flG~~~~~~~~~el~~~ia~aadvfV~PS~~E~f 653 (783)
+..++++|+++|.++.. ........ .+++.++|.|+|.. +++..+++. +|++++||.+|+|
T Consensus 220 ~~~~~~~l~i~G~~~~~-----------~~~~~~~~~~~~~~~~v~~~g~~------~~~~~~~~~-adi~v~ps~~e~~ 281 (365)
T cd03807 220 KKFPNARLLLVGDGPDR-----------ANLELLALKELGLEDKVILLGER------SDVPALLNA-LDVFVLSSLSEGF 281 (365)
T ss_pred HhCCCeEEEEecCCcch-----------hHHHHHHHHhcCCCceEEEcccc------ccHHHHHHh-CCEEEeCCccccC
Confidence 88889999999998652 23334444 78888999999932 457788885 9999999999999
Q ss_pred cHHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhCCHHH
Q 003962 654 GLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEEKYTWKI 733 (783)
Q Consensus 654 GltvlEAMa~GlPVVat~~GG~~EiI~dg~~G~li~p~d~e~lAeaI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~~ 733 (783)
|++++|||+||+|||+|+.||..|++.+ +|++++++|+++++++|.+++ +|++.+.++++++++.+.++|||+.
T Consensus 282 ~~~~~Ea~a~g~PvI~~~~~~~~e~~~~--~g~~~~~~~~~~l~~~i~~l~----~~~~~~~~~~~~~~~~~~~~~s~~~ 355 (365)
T cd03807 282 PNVLLEAMACGLPVVATDVGDNAELVGD--TGFLVPPGDPEALAEAIEALL----ADPALRQALGEAARERIEENFSIEA 355 (365)
T ss_pred CcHHHHHHhcCCCEEEcCCCChHHHhhc--CCEEeCCCCHHHHHHHHHHHH----hChHHHHHHHHHHHHHHHHhCCHHH
Confidence 9999999999999999999999999977 899999999999999997766 7999999999999999999999999
Q ss_pred HHHHHHHHHH
Q 003962 734 YSQRLLTLTG 743 (783)
Q Consensus 734 ~a~~ll~ly~ 743 (783)
.++++.++|+
T Consensus 356 ~~~~~~~~y~ 365 (365)
T cd03807 356 MVEAYEELYR 365 (365)
T ss_pred HHHHHHHHhC
Confidence 9999999873
No 45
>PLN02846 digalactosyldiacylglycerol synthase
Probab=100.00 E-value=3.4e-33 Score=315.02 Aligned_cols=372 Identities=13% Similarity=0.121 Sum_probs=240.5
Q ss_pred CcceEEEEcccccccccCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHHCC-CceeeceeEEeCCCCCCCC-------Cc
Q 003962 253 MVFNVVILTPHGYFAQDDVLGYPDTGGQVVYILDQVRALEDEMLLRIKQQG-LDITPQILIITRLLPDAVG-------TT 324 (783)
Q Consensus 253 m~~rI~iis~h~~~~~~~~lg~p~tGG~~vyv~d~araL~~eLa~~L~~~G-heV~~~i~VvT~~~~~~~g-------~~ 324 (783)
+.|||+|++..+. |..+|..+.+. .++..|+++| |+|+ |+.+..+.... ..
T Consensus 3 ~~mrIaivTdt~l---------P~vnGva~s~~--------~~a~~L~~~G~heV~----vvaP~~~~~~~~~~~~~~~~ 61 (462)
T PLN02846 3 KKQHIAIFTTASL---------PWMTGTAVNPL--------FRAAYLAKDGDREVT----LVIPWLSLKDQKLVYPNKIT 61 (462)
T ss_pred CCCEEEEEEcCCC---------CCCCCeeccHH--------HHHHHHHhcCCcEEE----EEecCCcccccccccccccc
Confidence 4699999998776 67899999999 6777889999 7999 99876543210 00
Q ss_pred ccceeee---ecCccCeEEEEeccCCCccccccccc--cccchhhHHHHHHHHHHHHHHHcCCCceEEEEcCCCc-hHH-
Q 003962 325 CGQRLEK---VYGTKYSDILRVPFRTEKGVVRKWIS--RFEVWPYLETYTEDVAVEIAKELQGKPDLIIGNYSDG-NIV- 397 (783)
Q Consensus 325 ~~~~~e~---i~~~~~v~Ilrvp~~~~~~~~~~~is--r~~i~~~l~~f~~~~~~~l~~~l~~~pDIIh~h~~~~-~lv- 397 (783)
++...++ +....+.++.++|..+...+ +...+ +..+++. .++.+.+. +.+|||||.+.+.. ++.
T Consensus 62 f~~~~~~e~~~~~~~~~~v~r~~s~~~p~y-p~r~~~~~r~~~~~-----~~i~~~l~---~~~pDVIHv~tP~~LG~~~ 132 (462)
T PLN02846 62 FSSPSEQEAYVRQWLEERISFLPKFSIKFY-PGKFSTDKRSILPV-----GDISETIP---DEEADIAVLEEPEHLTWYH 132 (462)
T ss_pred ccCchhhhhhhhhhccCeEEEecccccccC-cccccccccccCCh-----HHHHHHHH---hcCCCEEEEcCchhhhhHH
Confidence 0001000 10001234555544332110 11000 0111111 12222222 25799999998876 554
Q ss_pred -HHHHHHhcCCcEEEEecCCCccCCCCCchhhhhccccccccchhhHhHHhhhcCCEEEcCCHHHHhhcccccccccccc
Q 003962 398 -ASLLAHKLGVTQCTIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTFQEIAGSKDTVGQYESHT 476 (783)
Q Consensus 398 -a~llar~lgvp~v~t~H~l~~~~~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~~~~~~~~v~qy~~~~ 476 (783)
|..+++++++ +|.+.|+... .|.. .++. .....+..........-.++|.+++.|....+ +
T Consensus 133 ~g~~~~~k~~~-vV~tyHT~y~-~Y~~---~~~~-g~~~~~l~~~~~~~~~r~~~d~vi~pS~~~~~-l----------- 194 (462)
T PLN02846 133 HGKRWKTKFRL-VIGIVHTNYL-EYVK---REKN-GRVKAFLLKYINSWVVDIYCHKVIRLSAATQD-Y----------- 194 (462)
T ss_pred HHHHHHhcCCc-EEEEECCChH-HHHH---Hhcc-chHHHHHHHHHHHHHHHHhcCEEEccCHHHHH-H-----------
Confidence 6666777765 8889998321 1100 0000 00000000000011112358999999974432 0
Q ss_pred ccccccceeeeccCCCCCCcEEEecCCccCCCCCCCchHHHhhccCchhhHHhhcChhhhhhhhccccCCC--CcEEEEE
Q 003962 477 AFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEEKRRLKSFHPEIEELLYSDVENKEHLCVLKDRN--KPILFTM 554 (783)
Q Consensus 477 ~f~~p~l~~v~~gi~~~~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~~~~~l~~~~~~~~~~gll~~~~--k~iIl~v 554 (783)
.....+.++|||.+.|.|....... ..+ ..+ .+.++|+
T Consensus 195 -----------------~~~~i~~v~GVd~~~f~~~~~~~~~--------------------~~~---~~~~~~~~~l~v 234 (462)
T PLN02846 195 -----------------PRSIICNVHGVNPKFLEIGKLKLEQ--------------------QKN---GEQAFTKGAYYI 234 (462)
T ss_pred -----------------hhCEEecCceechhhcCCCcccHhh--------------------hcC---CCCCcceEEEEE
Confidence 1122234589999988776432111 011 122 3568999
Q ss_pred ecccCCCCHHHHHHHHHHhHccCCCeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHHcCCCCcEEEccCCCCcCChHHHH
Q 003962 555 ARLDRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELY 634 (783)
Q Consensus 555 GRL~~~Kgl~~LieA~~~l~~~~~~~~LvIVG~g~~~~~~~~ee~~~~~~l~~li~~~~L~~~V~flG~~~~~~~~~el~ 634 (783)
|||.+.||++.|++|+.++.+..++++|+|+|+|++ .++++++++++++..++ |.| ....++++
T Consensus 235 GRL~~eK~~~~Li~a~~~l~~~~~~~~l~ivGdGp~-----------~~~L~~~a~~l~l~~~v-f~G----~~~~~~~~ 298 (462)
T PLN02846 235 GKMVWSKGYKELLKLLHKHQKELSGLEVDLYGSGED-----------SDEVKAAAEKLELDVRV-YPG----RDHADPLF 298 (462)
T ss_pred ecCcccCCHHHHHHHHHHHHhhCCCeEEEEECCCcc-----------HHHHHHHHHhcCCcEEE-ECC----CCCHHHHH
Confidence 999999999999999999988778999999999987 36788899998886555 788 33444444
Q ss_pred HHHHccCcEEEeCCCCCCCcHHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHHHHHHHHHHHHHHhhCCHHHH
Q 003962 635 RYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYW 714 (783)
Q Consensus 635 ~~ia~aadvfV~PS~~E~fGltvlEAMa~GlPVVat~~GG~~EiI~dg~~G~li~p~d~e~lAeaI~~~l~~l~~dp~~~ 714 (783)
+ ++|+||+||.+|+||++++||||||+|||+++.++ .+++.++.+|+.++ |.+++++++..++. .++
T Consensus 299 ---~-~~DvFv~pS~~Et~g~v~lEAmA~G~PVVa~~~~~-~~~v~~~~ng~~~~--~~~~~a~ai~~~l~---~~~--- 365 (462)
T PLN02846 299 ---H-DYKVFLNPSTTDVVCTTTAEALAMGKIVVCANHPS-NEFFKQFPNCRTYD--DGKGFVRATLKALA---EEP--- 365 (462)
T ss_pred ---H-hCCEEEECCCcccchHHHHHHHHcCCcEEEecCCC-cceeecCCceEecC--CHHHHHHHHHHHHc---cCc---
Confidence 4 58999999999999999999999999999999998 59999999999985 89999999987763 233
Q ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHHHHh
Q 003962 715 DKISLGGLKRIEEKYTWKIYSQRLLTLTGVY 745 (783)
Q Consensus 715 ~~ms~~a~~~v~~~ysw~~~a~~ll~ly~~~ 745 (783)
..++.+++ +.|||+..+++++++|+.-
T Consensus 366 ~~~~~~a~----~~~SWe~~~~~l~~~~~~~ 392 (462)
T PLN02846 366 APLTDAQR----HELSWEAATERFLRVADLD 392 (462)
T ss_pred hhHHHHHH----HhCCHHHHHHHHHHHhccC
Confidence 23333332 5899999999999999864
No 46
>cd03812 GT1_CapH_like This family is most closely related to the GT1 family of glycosyltransferases. capH in Staphylococcus aureus has been shown to be required for the biosynthesis of the type 1 capsular polysaccharide (CP1).
Probab=100.00 E-value=2.9e-33 Score=306.19 Aligned_cols=346 Identities=14% Similarity=0.193 Sum_probs=246.6
Q ss_pred eEEEEcccccccccCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHHCCCceeeceeEEeCCCCCCCCCcccceeeeecCc
Q 003962 256 NVVILTPHGYFAQDDVLGYPDTGGQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRLLPDAVGTTCGQRLEKVYGT 335 (783)
Q Consensus 256 rI~iis~h~~~~~~~~lg~p~tGG~~vyv~d~araL~~eLa~~L~~~GheV~~~i~VvT~~~~~~~g~~~~~~~e~i~~~ 335 (783)
||+++++.. ..||.+.++. ++++.|++.||+|+ +++...... ...... ..
T Consensus 1 kIl~~~~~~-----------~~GG~~~~~~--------~l~~~L~~~~~~v~----~i~~~~~~~---~~~~~~----~~ 50 (358)
T cd03812 1 KILHIVGTM-----------NRGGIETFIM--------NYYRNLDRSKIQFD----FLVTSKEEG---DYDDEI----EK 50 (358)
T ss_pred CEEEEeCCC-----------CCccHHHHHH--------HHHHhcCccceEEE----EEEeCCCCc---chHHHH----HH
Confidence 578887543 3599999999 55566678999999 887643221 011111 11
Q ss_pred cCeEEEEeccCCCccccccccccccchhhHHHHHHHHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHhcCCcE-EEEec
Q 003962 336 KYSDILRVPFRTEKGVVRKWISRFEVWPYLETYTEDVAVEIAKELQGKPDLIIGNYSDGNIVASLLAHKLGVTQ-CTIAH 414 (783)
Q Consensus 336 ~~v~Ilrvp~~~~~~~~~~~isr~~i~~~l~~f~~~~~~~l~~~l~~~pDIIh~h~~~~~lva~llar~lgvp~-v~t~H 414 (783)
.++.+++++.... ..+ .+.....+ +.. +.+||+||+|......++..+++..+.|. +.+.|
T Consensus 51 ~~~~~~~~~~~~~-----------~~~----~~~~~~~~-~~~--~~~~Dvv~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 112 (358)
T cd03812 51 LGGKIYYIPARKK-----------NPL----KYFKKLYK-LIK--KNKYDIVHVHGSSASGFILLAAKKAGVKVRIAHSH 112 (358)
T ss_pred cCCeEEEecCCCc-----------cHH----HHHHHHHH-HHh--cCCCCEEEEeCcchhHHHHHHHhhCCCCeEEEEec
Confidence 2455555443321 111 12222222 222 35899999999877667777777778775 55677
Q ss_pred CCCccCCCCCchhhhhccccccccchhhHhHHhhhcCCEEEcCCHHHHhhccccccccccccccccccceeeeccCCCCC
Q 003962 415 ALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFD 494 (783)
Q Consensus 415 ~l~~~~~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~~~~~~~~v~qy~~~~~f~~p~l~~v~~gi~~~~ 494 (783)
............. .. ...+...++.+|.++++|....+.+... + ..
T Consensus 113 ~~~~~~~~~~~~~--------~~---~~~~~~~~~~~~~~i~~s~~~~~~~~~~---------------------~--~~ 158 (358)
T cd03812 113 NTSDSHDKKKKIL--------KY---KVLRKLINRLATDYLACSEEAGKWLFGK---------------------V--KN 158 (358)
T ss_pred cccccccccchhh--------HH---HHHHHHHHhcCCEEEEcCHHHHHHHHhC---------------------C--Cc
Confidence 6432221110000 00 1224456889999999998776532211 1 15
Q ss_pred CcEEEecCCccCCCCCCCchHHHhhccCchhhHHhhcChhhhhhhhccccCCCCcEEEEEecccCCCCHHHHHHHHHHhH
Q 003962 495 PKFNIVSPGADMSIYFPYTEEKRRLKSFHPEIEELLYSDVENKEHLCVLKDRNKPILFTMARLDRVKNLTGLVEWYGKNA 574 (783)
Q Consensus 495 ~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~~~~~l~~~~~~~~~~gll~~~~k~iIl~vGRL~~~Kgl~~LieA~~~l~ 574 (783)
.++.+||||+|.+.+.+....... ++..+. ..+++.|+|+||+.+.||++.+++++.++.
T Consensus 159 ~~~~vi~ngvd~~~~~~~~~~~~~------------------~~~~~~--~~~~~~i~~vGr~~~~Kg~~~li~a~~~l~ 218 (358)
T cd03812 159 KKFKVIPNGIDLEKFIFNEEIRKK------------------RRELGI--LEDKFVIGHVGRFSEQKNHEFLIEIFAELL 218 (358)
T ss_pred ccEEEEeccCcHHHcCCCchhhhH------------------HHHcCC--CCCCEEEEEEeccccccChHHHHHHHHHHH
Confidence 789999999999877655332111 122333 567889999999999999999999999999
Q ss_pred ccCCCeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHHcCCCCcEEEccCCCCcCChHHHHHHHHccCcEEEeCCCCCCCc
Q 003962 575 KLRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFG 654 (783)
Q Consensus 575 ~~~~~~~LvIVG~g~~~~~~~~ee~~~~~~l~~li~~~~L~~~V~flG~~~~~~~~~el~~~ia~aadvfV~PS~~E~fG 654 (783)
+..++++++|+|+|+. .+.+++.++++++.++|.|+|. .+++..+++. +|++|+||.+|+||
T Consensus 219 ~~~~~~~l~ivG~g~~-----------~~~~~~~~~~~~~~~~v~~~g~------~~~~~~~~~~-adi~v~ps~~E~~~ 280 (358)
T cd03812 219 KKNPNAKLLLVGDGEL-----------EEEIKKKVKELGLEDKVIFLGV------RNDVPELLQA-MDVFLFPSLYEGLP 280 (358)
T ss_pred HhCCCeEEEEEeCCch-----------HHHHHHHHHhcCCCCcEEEecc------cCCHHHHHHh-cCEEEecccccCCC
Confidence 8889999999999864 3567888889999999999994 3467888885 99999999999999
Q ss_pred HHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHH
Q 003962 655 LTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIE 726 (783)
Q Consensus 655 ltvlEAMa~GlPVVat~~GG~~EiI~dg~~G~li~p~d~e~lAeaI~~~l~~l~~dp~~~~~ms~~a~~~v~ 726 (783)
++++|||+||+|||+|+.||..|++.+ ..|++..+++++++|++|.+++ +||+.++.++..+.....
T Consensus 281 ~~~lEAma~G~PvI~s~~~~~~~~i~~-~~~~~~~~~~~~~~a~~i~~l~----~~~~~~~~~~~~~~~~~~ 347 (358)
T cd03812 281 LVLIEAQASGLPCILSDTITKEVDLTD-LVKFLSLDESPEIWAEEILKLK----SEDRRERSSESIKKKGLD 347 (358)
T ss_pred HHHHHHHHhCCCEEEEcCCchhhhhcc-CccEEeCCCCHHHHHHHHHHHH----hCcchhhhhhhhhhccch
Confidence 999999999999999999999999998 4677777778999999997666 899999988888776653
No 47
>cd03816 GT1_ALG1_like This family is most closely related to the GT1 family of glycosyltransferases. The yeast gene ALG1 has been shown to function as a mannosyltransferase that catalyzes the formation of dolichol pyrophosphate (Dol-PP)-GlcNAc2Man from GDP-Man and Dol-PP-Glc-NAc2, and participates in the formation of the lipid-linked precursor oligosaccharide for N-glycosylation. In humans ALG1 has been associated with the congenital disorders of glycosylation (CDG) designated as subtype CDG-Ik.
Probab=100.00 E-value=8.6e-33 Score=312.38 Aligned_cols=391 Identities=12% Similarity=0.072 Sum_probs=255.8
Q ss_pred CCcceEEEEcccccccccCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHHCCCceeeceeEEeCCCCCCCCCcccceeee
Q 003962 252 PMVFNVVILTPHGYFAQDDVLGYPDTGGQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRLLPDAVGTTCGQRLEK 331 (783)
Q Consensus 252 pm~~rI~iis~h~~~~~~~~lg~p~tGG~~vyv~d~araL~~eLa~~L~~~GheV~~~i~VvT~~~~~~~g~~~~~~~e~ 331 (783)
|.-.||++++.- . +|.+..+. +++++|+++||+|+ |+|...+... +.
T Consensus 1 ~~~~~~~~~~~~-~------------~~~~~R~~--------~~a~~L~~~G~~V~----ii~~~~~~~~--------~~ 47 (415)
T cd03816 1 PKRKRVCVLVLG-D------------IGRSPRMQ--------YHALSLAKHGWKVD----LVGYLETPPH--------DE 47 (415)
T ss_pred CCccEEEEEEec-c------------cCCCHHHH--------HHHHHHHhcCceEE----EEEecCCCCC--------HH
Confidence 344678888742 1 35556667 67777899999999 8886532210 11
Q ss_pred ecCccCeEEEEeccCC-CccccccccccccchhhHHHHHH---HHHHHHHHHcCCCceEEEEcCCCc---hHHHHHHHHh
Q 003962 332 VYGTKYSDILRVPFRT-EKGVVRKWISRFEVWPYLETYTE---DVAVEIAKELQGKPDLIIGNYSDG---NIVASLLAHK 404 (783)
Q Consensus 332 i~~~~~v~Ilrvp~~~-~~~~~~~~isr~~i~~~l~~f~~---~~~~~l~~~l~~~pDIIh~h~~~~---~lva~llar~ 404 (783)
.....++.+++++..+ ..+. ......+...... .....+.. ..+||+||+|.+.. ...+.++++.
T Consensus 48 ~~~~~~v~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~l~~--~~~~Dvi~~~~~~~~~~~~~a~~~~~~ 119 (415)
T cd03816 48 ILSNPNITIHPLPPPPQRLNK------LPFLLFAPLKVLWQFFSLLWLLYK--LRPADYILIQNPPSIPTLLIAWLYCLL 119 (415)
T ss_pred HhcCCCEEEEECCCCcccccc------chHHHHHHHHHHHHHHHHHHHHHh--cCCCCEEEEeCCCCchHHHHHHHHHHH
Confidence 1122467788776653 1110 0011112111111 11111222 24799999987554 3456667777
Q ss_pred cCCcEEEEecCCCccCCCCCchhhhhccccccccchhhHhHHhhhcCCEEEcCCHHHHhhccccccccccccccccccce
Q 003962 405 LGVTQCTIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLY 484 (783)
Q Consensus 405 lgvp~v~t~H~l~~~~~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~~~~~~~~v~qy~~~~~f~~p~l~ 484 (783)
.++|+|++.|+....... ...........+ ....+...++.+|.||++|+...+.+.+
T Consensus 120 ~~~~~V~~~h~~~~~~~~---~~~~~~~~~~~~--~~~~e~~~~~~ad~ii~vS~~~~~~l~~----------------- 177 (415)
T cd03816 120 RRTKLIIDWHNYGYTILA---LKLGENHPLVRL--AKWYEKLFGRLADYNLCVTKAMKEDLQQ----------------- 177 (415)
T ss_pred hCCeEEEEcCCchHHHHh---cccCCCCHHHHH--HHHHHHHHhhcCCEeeecCHHHHHHHHh-----------------
Confidence 899999999986421110 000000000111 1123667789999999999987764322
Q ss_pred eeeccCCCCCCcEEEecCCccCCCCCCCchHHHhhccCchhhHHhhcChhh-hhhhhccccCCCCcEEEEEecccCCCCH
Q 003962 485 RVVHGIDVFDPKFNIVSPGADMSIYFPYTEEKRRLKSFHPEIEELLYSDVE-NKEHLCVLKDRNKPILFTMARLDRVKNL 563 (783)
Q Consensus 485 ~v~~gi~~~~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~~~~~l~~~~~-~~~~~gll~~~~k~iIl~vGRL~~~Kgl 563 (783)
.|++ ..|+.|||||. ...|.|........... . ...-+++.. .....+.. +++..+++++||+.+.||+
T Consensus 178 ---~~~~--~~ki~vI~Ng~-~~~f~p~~~~~~~~~~~-~--~~~~~~~~~~~~~~~~~~-~~~~~vi~~~grl~~~K~~ 247 (415)
T cd03816 178 ---FNNW--KIRATVLYDRP-PEQFRPLPLEEKHELFL-K--LAKTFLTRELRIGAVQLS-EERPALLVSSTSWTPDEDF 247 (415)
T ss_pred ---hhcc--CCCeeecCCCC-HHHceeCcHHHHHHHHH-h--ccccccccccccccceec-CCCceEEEEeccccCCCCH
Confidence 1333 78999999994 45676654322110000 0 000000000 00011221 2344678889999999999
Q ss_pred HHHHHHHHHhHc------cCCCeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHHcCCCCcEEEccCCCCcCChHHHHHHH
Q 003962 564 TGLVEWYGKNAK------LRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYI 637 (783)
Q Consensus 564 ~~LieA~~~l~~------~~~~~~LvIVG~g~~~~~~~~ee~~~~~~l~~li~~~~L~~~V~flG~~~~~~~~~el~~~i 637 (783)
+.|++|+..+.+ .+|+++|+|+|+|+. .++++++++++++.+.+.+.| +++.+++..++
T Consensus 248 ~~li~A~~~l~~~~~~~~~~~~i~l~ivG~G~~-----------~~~l~~~~~~~~l~~~~~~~g----~~~~~~~~~~l 312 (415)
T cd03816 248 GILLDALVAYEKSAATGPKLPKLLCIITGKGPL-----------KEKYLERIKELKLKKVTIRTP----WLSAEDYPKLL 312 (415)
T ss_pred HHHHHHHHHHHHhhcccccCCCEEEEEEecCcc-----------HHHHHHHHHHcCCCcEEEEcC----cCCHHHHHHHH
Confidence 999999999874 347899999999965 467888999999965444556 67789999999
Q ss_pred HccCcEEEeCC---CCCCCcHHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHHHHHHHHHHHHHHhhCC---H
Q 003962 638 CDTKGAFVQPA---LYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKAD---P 711 (783)
Q Consensus 638 a~aadvfV~PS---~~E~fGltvlEAMa~GlPVVat~~GG~~EiI~dg~~G~li~p~d~e~lAeaI~~~l~~l~~d---p 711 (783)
+. +|++|.|+ ..|+||++++||||||+|||+|+.||..|+|+++.+|++++ |++++|++|..++ +| +
T Consensus 313 ~~-aDv~v~~~~~~~~~~~p~~~~Eama~G~PVI~s~~~~~~eiv~~~~~G~lv~--d~~~la~~i~~ll----~~~~~~ 385 (415)
T cd03816 313 AS-ADLGVSLHTSSSGLDLPMKVVDMFGCGLPVCALDFKCIDELVKHGENGLVFG--DSEELAEQLIDLL----SNFPNR 385 (415)
T ss_pred Hh-CCEEEEccccccccCCcHHHHHHHHcCCCEEEeCCCCHHHHhcCCCCEEEEC--CHHHHHHHHHHHH----hcCCCH
Confidence 95 99999753 25889999999999999999999999999999999999994 8999999997766 77 9
Q ss_pred HHHHHHHHHHHHHHHHhCCHHHHHHHHH
Q 003962 712 SYWDKISLGGLKRIEEKYTWKIYSQRLL 739 (783)
Q Consensus 712 ~~~~~ms~~a~~~v~~~ysw~~~a~~ll 739 (783)
+.+++|+++|++.. .++|+...++.+
T Consensus 386 ~~~~~m~~~~~~~~--~~~~~~~~~~~~ 411 (415)
T cd03816 386 GKLNSLKKGAQEES--ELRWDENWDRVV 411 (415)
T ss_pred HHHHHHHHHHHHhh--hcCHHHHHHHHh
Confidence 99999999999986 678876666554
No 48
>PRK09922 UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D-galactosyltransferase; Provisional
Probab=100.00 E-value=1.9e-33 Score=311.25 Aligned_cols=268 Identities=16% Similarity=0.207 Sum_probs=203.0
Q ss_pred CCceEEEEcCCCchHHHHHHHHhcCCcE--EEEecCCCccCCCCCchhhhhccccccccchhhHhHHhhhcCCEEEcCCH
Q 003962 382 GKPDLIIGNYSDGNIVASLLAHKLGVTQ--CTIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTF 459 (783)
Q Consensus 382 ~~pDIIh~h~~~~~lva~llar~lgvp~--v~t~H~l~~~~~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~ 459 (783)
.+||+||+|.......+.++++..++|. +.+.|...... + .+ ....+..+|.++++|.
T Consensus 83 ~~~Dii~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~-------~-----~~--------~~~~~~~~d~~i~~S~ 142 (359)
T PRK09922 83 TQPDIVICIDVISCLYANKARKKSGKQFKIFSWPHFSLDHK-------K-----HA--------ECKKITCADYHLAISS 142 (359)
T ss_pred cCCCEEEEcCHHHHHHHHHHHHHhCCCCeEEEEecCccccc-------c-----hh--------hhhhhhcCCEEEEcCH
Confidence 5799999998766667777777777654 44555321100 0 00 0012468999999998
Q ss_pred HHHhhccccccccccccccccccceeeeccCCCCCCcEEEecCCccCCCCCCCchHHHhhccCchhhHHhhcChhhhhhh
Q 003962 460 QEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEEKRRLKSFHPEIEELLYSDVENKEH 539 (783)
Q Consensus 460 ~~~~~~~~~v~qy~~~~~f~~p~l~~v~~gi~~~~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~~~~~l~~~~~~~~~ 539 (783)
...+.+.+ .|++ .+++.+||||+|.+.+.....
T Consensus 143 ~~~~~~~~--------------------~~~~--~~ki~vi~N~id~~~~~~~~~------------------------- 175 (359)
T PRK09922 143 GIKEQMMA--------------------RGIS--AQRISVIYNPVEIKTIIIPPP------------------------- 175 (359)
T ss_pred HHHHHHHH--------------------cCCC--HHHEEEEcCCCCHHHccCCCc-------------------------
Confidence 77663221 2333 668999999999654432110
Q ss_pred hccccCCCCcEEEEEeccc--CCCCHHHHHHHHHHhHccCCCeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHHcCCCCc
Q 003962 540 LCVLKDRNKPILFTMARLD--RVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLNGQ 617 (783)
Q Consensus 540 ~gll~~~~k~iIl~vGRL~--~~Kgl~~LieA~~~l~~~~~~~~LvIVG~g~~~~~~~~ee~~~~~~l~~li~~~~L~~~ 617 (783)
...+++.++++||+. +.||+..+++++.++. ++++|+|+|+|++ .++++++++++++.++
T Consensus 176 ----~~~~~~~i~~~Grl~~~~~k~~~~l~~a~~~~~---~~~~l~ivG~g~~-----------~~~l~~~~~~~~l~~~ 237 (359)
T PRK09922 176 ----ERDKPAVFLYVGRLKFEGQKNVKELFDGLSQTT---GEWQLHIIGDGSD-----------FEKCKAYSRELGIEQR 237 (359)
T ss_pred ----ccCCCcEEEEEEEEecccCcCHHHHHHHHHhhC---CCeEEEEEeCCcc-----------HHHHHHHHHHcCCCCe
Confidence 023467899999996 4699999999998874 3799999999965 3678889999999999
Q ss_pred EEEccCCCCcCChHHHHHHHHccCcEEEeCCCCCCCcHHHHHHHHcCCcEEEcC-ccccccccccCceEEEECCCCHHHH
Q 003962 618 FRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATC-KGGPAEIIVNGKSGYHIDPYHGEQA 696 (783)
Q Consensus 618 V~flG~~~~~~~~~el~~~ia~aadvfV~PS~~E~fGltvlEAMa~GlPVVat~-~GG~~EiI~dg~~G~li~p~d~e~l 696 (783)
|.|+|++.+ +.+++..+++. +|++|+||.+|+||++++||||||+|||+|+ .||+.|+|.+|.+|++++|+|++++
T Consensus 238 v~f~G~~~~--~~~~~~~~~~~-~d~~v~~s~~Egf~~~~lEAma~G~Pvv~s~~~~g~~eiv~~~~~G~lv~~~d~~~l 314 (359)
T PRK09922 238 IIWHGWQSQ--PWEVVQQKIKN-VSALLLTSKFEGFPMTLLEAMSYGIPCISSDCMSGPRDIIKPGLNGELYTPGNIDEF 314 (359)
T ss_pred EEEecccCC--cHHHHHHHHhc-CcEEEECCcccCcChHHHHHHHcCCCEEEeCCCCChHHHccCCCceEEECCCCHHHH
Confidence 999996543 34677888885 9999999999999999999999999999999 8999999999999999999999999
Q ss_pred HHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Q 003962 697 AEILVDFFEKCKADPSYWDKISLGGLKRIEEKYTWKIYSQRLLTLTGV 744 (783)
Q Consensus 697 AeaI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~~~a~~ll~ly~~ 744 (783)
|++|.+++ +|++.+ +..+......+|+-+.+++++..+|..
T Consensus 315 a~~i~~l~----~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~ 355 (359)
T PRK09922 315 VGKLNKVI----SGEVKY---QHDAIPNSIERFYEVLYFKNLNNALFS 355 (359)
T ss_pred HHHHHHHH----hCcccC---CHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 99997766 788754 233333444778889999999888753
No 49
>cd03825 GT1_wcfI_like This family is most closely related to the GT1 family of glycosyltransferases. wcfI in Bacteroides fragilis has been shown to be involved in the capsular polysaccharide biosynthesis.
Probab=100.00 E-value=9.3e-33 Score=302.25 Aligned_cols=343 Identities=19% Similarity=0.240 Sum_probs=246.5
Q ss_pred ceEEEEcccccccccCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHHCCCceeeceeEEeCCCCCCCCCcccceeeeecC
Q 003962 255 FNVVILTPHGYFAQDDVLGYPDTGGQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRLLPDAVGTTCGQRLEKVYG 334 (783)
Q Consensus 255 ~rI~iis~h~~~~~~~~lg~p~tGG~~vyv~d~araL~~eLa~~L~~~GheV~~~i~VvT~~~~~~~g~~~~~~~e~i~~ 334 (783)
|||++++... ..||.+.++. .+++.|.++||+|+ +++....
T Consensus 1 MkIl~~~~~~-----------~~gG~~~~~~--------~l~~~l~~~G~~v~----v~~~~~~---------------- 41 (365)
T cd03825 1 MKVLHLNTSD-----------ISGGAARAAY--------RLHRALQAAGVDST----MLVQEKK---------------- 41 (365)
T ss_pred CeEEEEecCC-----------CCCcHHHHHH--------HHHHHHHhcCCcee----EEEeecc----------------
Confidence 7999997542 2489999999 66677799999999 7764320
Q ss_pred ccCeEEEEeccCCCccccccccccccchhhHHHHHHHHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHhc--CCcEEEE
Q 003962 335 TKYSDILRVPFRTEKGVVRKWISRFEVWPYLETYTEDVAVEIAKELQGKPDLIIGNYSDGNIVASLLAHKL--GVTQCTI 412 (783)
Q Consensus 335 ~~~v~Ilrvp~~~~~~~~~~~isr~~i~~~l~~f~~~~~~~l~~~l~~~pDIIh~h~~~~~lva~llar~l--gvp~v~t 412 (783)
. ..+.+. ..+|||||+|....+........+. ++|.|++
T Consensus 42 ------------~------------------------~~~~~~---~~~~diih~~~~~~~~~~~~~~~~~~~~~~~v~~ 82 (365)
T cd03825 42 ------------A------------------------LISKIE---IINADIVHLHWIHGGFLSIEDLSKLLDRKPVVWT 82 (365)
T ss_pred ------------h------------------------hhhChh---cccCCEEEEEccccCccCHHHHHHHHcCCCEEEE
Confidence 0 000111 2479999999866544444444444 9999999
Q ss_pred ecCCCccCC----CCCchhhhhc------ccccc---ccchhh-H-hHHhhhcCCEEEcCCHHHHhhccccccccccccc
Q 003962 413 AHALEKTKY----PDSDIYWKNL------DDKYH---FSCQFT-A-DLIAMNHTDFIITSTFQEIAGSKDTVGQYESHTA 477 (783)
Q Consensus 413 ~H~l~~~~~----~~s~~~~~~~------~~~y~---f~~~~~-~-e~~a~~~AD~IIt~S~~~~~~~~~~v~qy~~~~~ 477 (783)
+|+...... ......|... ...+. +..+.. . .......++.++++|....+.+.+..
T Consensus 83 ~hd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~s~~~~~~~~~~~-------- 154 (365)
T cd03825 83 LHDMWPFTGGCHYPGGCDRYKTECGNCPQLGSYPEKDLSRWIWRRKRKAWADLNLTIVAPSRWLADCARSSS-------- 154 (365)
T ss_pred cccCcccccccCCccccccccccCCCCCCCCCCCcccHHHHHHHHHHHHhccCCcEEEehhHHHHHHHHhcc--------
Confidence 998643211 1000001000 00000 011110 0 11122467788888876554322210
Q ss_pred cccccceeeeccCCCCCCcEEEecCCccCCCCCCCchHHHhhccCchhhHHhhcChhhhhhhhccccCCCCcEEEEEecc
Q 003962 478 FTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEEKRRLKSFHPEIEELLYSDVENKEHLCVLKDRNKPILFTMARL 557 (783)
Q Consensus 478 f~~p~l~~v~~gi~~~~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~~~~~l~~~~~~~~~~gll~~~~k~iIl~vGRL 557 (783)
.++ ..++.++|||+|.+.|.|...... ++.+++ +++++++++.|+.
T Consensus 155 -----------~~~--~~~~~vi~ngi~~~~~~~~~~~~~-------------------~~~~~~--~~~~~~i~~~~~~ 200 (365)
T cd03825 155 -----------LFK--GIPIEVIPNGIDTTIFRPRDKREA-------------------RKRLGL--PADKKIILFGAVG 200 (365)
T ss_pred -----------ccC--CCceEEeCCCCcccccCCCcHHHH-------------------HHHhCC--CCCCeEEEEEecC
Confidence 122 578999999999998876543321 233455 5566777777777
Q ss_pred cC--CCCHHHHHHHHHHhHcc-CCCeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHHcCCCCcEEEccCCCCcCC-hHHH
Q 003962 558 DR--VKNLTGLVEWYGKNAKL-RELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVR-NGEL 633 (783)
Q Consensus 558 ~~--~Kgl~~LieA~~~l~~~-~~~~~LvIVG~g~~~~~~~~ee~~~~~~l~~li~~~~L~~~V~flG~~~~~~~-~~el 633 (783)
.. .||++.+++++..+.+. .+++.++++|++... .. .++..+|.|+| +++ .+++
T Consensus 201 ~~~~~K~~~~ll~a~~~l~~~~~~~~~~~i~G~~~~~-----------~~-------~~~~~~v~~~g----~~~~~~~~ 258 (365)
T cd03825 201 GTDPRKGFDELIEALKRLAERWKDDIELVVFGASDPE-----------IP-------PDLPFPVHYLG----SLNDDESL 258 (365)
T ss_pred CCccccCHHHHHHHHHHhhhccCCCeEEEEeCCCchh-----------hh-------ccCCCceEecC----CcCCHHHH
Confidence 65 89999999999998765 578999999998641 00 14567899999 555 6778
Q ss_pred HHHHHccCcEEEeCCCCCCCcHHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHHHHHHHHHHHHHHhhCCHHH
Q 003962 634 YRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSY 713 (783)
Q Consensus 634 ~~~ia~aadvfV~PS~~E~fGltvlEAMa~GlPVVat~~GG~~EiI~dg~~G~li~p~d~e~lAeaI~~~l~~l~~dp~~ 713 (783)
..+++. +|++++||..|+||++++|||+||+|||+++.||..|++.++.+|+++++.|+++++++|.+++ .|++.
T Consensus 259 ~~~~~~-ad~~l~ps~~e~~g~~~~Eam~~g~PvI~~~~~~~~e~~~~~~~g~~~~~~~~~~~~~~l~~l~----~~~~~ 333 (365)
T cd03825 259 ALIYSA-ADVFVVPSLQENFPNTAIEALACGTPVVAFDVGGIPDIVDHGVTGYLAKPGDPEDLAEGIEWLL----ADPDE 333 (365)
T ss_pred HHHHHh-CCEEEeccccccccHHHHHHHhcCCCEEEecCCCChhheeCCCceEEeCCCCHHHHHHHHHHHH----hCHHH
Confidence 888885 9999999999999999999999999999999999999999999999999999999999997766 79999
Q ss_pred HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Q 003962 714 WDKISLGGLKRIEEKYTWKIYSQRLLTLTGV 744 (783)
Q Consensus 714 ~~~ms~~a~~~v~~~ysw~~~a~~ll~ly~~ 744 (783)
+.+|++++++.+.++|||+.++++|+++|+.
T Consensus 334 ~~~~~~~~~~~~~~~~s~~~~~~~~~~~y~~ 364 (365)
T cd03825 334 REELGEAARELAENEFDSRVQAKRYLSLYEE 364 (365)
T ss_pred HHHHHHHHHHHHHHhcCHHHHHHHHHHHHhh
Confidence 9999999999999999999999999999863
No 50
>cd03806 GT1_ALG11_like This family is most closely related to the GT1 family of glycosyltransferases. ALG11 in yeast is involved in adding the final 1,2-linked Man to the Man5GlcNAc2-PP-Dol synthesized on the cytosolic face of the ER. The deletion analysis of ALG11 was shown to block the early steps of core biosynthesis that takes place on the cytoplasmic face of the ER and lead to a defect in the assembly of lipid-linked oligosaccharides.
Probab=100.00 E-value=1.8e-32 Score=310.02 Aligned_cols=383 Identities=17% Similarity=0.187 Sum_probs=249.0
Q ss_pred EEEEcccccccccCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHHC--CCceeeceeEEeCCCCCCCCCcc--cceeeee
Q 003962 257 VVILTPHGYFAQDDVLGYPDTGGQVVYILDQVRALEDEMLLRIKQQ--GLDITPQILIITRLLPDAVGTTC--GQRLEKV 332 (783)
Q Consensus 257 I~iis~h~~~~~~~~lg~p~tGG~~vyv~d~araL~~eLa~~L~~~--GheV~~~i~VvT~~~~~~~g~~~--~~~~e~i 332 (783)
|+++.|+-- ..||.++.+++.|++| .++ ||+|+ |+|.........-. ......+
T Consensus 3 ~~f~hp~~~----------~ggg~ervl~~a~~~l--------~~~~~~~~v~----i~t~~~~~~~~~~l~~~~~~f~~ 60 (419)
T cd03806 3 VGFFHPYCN----------AGGGGERVLWCAVRAL--------QKRYPNNIVV----IYTGDLDATPEEILEKVESRFNI 60 (419)
T ss_pred EEEECCCCC----------CCCCchHHHHHHHHHH--------HHhCCCcEEE----EECCCCCCCHHHHHHHHHHhcCe
Confidence 667766543 2379999999777665 555 88898 99987433210000 0001111
Q ss_pred cCccCeEEEEec-cCCCccccccccccccchhhHHHHHHHHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHhcCCcEEE
Q 003962 333 YGTKYSDILRVP-FRTEKGVVRKWISRFEVWPYLETYTEDVAVEIAKELQGKPDLIIGNYSDGNIVASLLAHKLGVTQCT 411 (783)
Q Consensus 333 ~~~~~v~Ilrvp-~~~~~~~~~~~isr~~i~~~l~~f~~~~~~~l~~~l~~~pDIIh~h~~~~~lva~llar~lgvp~v~ 411 (783)
...+++.++++. .+. .+-++...|+.. +.+++..+...+....+.+||||+.+...+. ...++....++|++.
T Consensus 61 ~~~~~~~~~~~~~~~~--~~~~~~~~r~~~---~~~~~~~~~~~~~~~~~~~pDv~i~~~g~~~-~~~~~~~~~~~~~i~ 134 (419)
T cd03806 61 ELDRPRIVFFLLKYRK--LVEASTYPRFTL---LGQALGSMILGLEALLKLVPDIFIDTMGYPF-TYPLVRLLGGCPVGA 134 (419)
T ss_pred ecCCCceEEEEeccee--eeccccCCceee---HHHHHHHHHHHHHHHHhcCCCEEEEcCCccc-HHHHHHHhcCCeEEE
Confidence 112344544443 111 011111222222 1233333333333332447999998864331 111122234889999
Q ss_pred EecCCCccCCCCCc--hhhh-------------h---ccccccccchhhHhHHhhhcCCEEEcCCHHHHhhccccccccc
Q 003962 412 IAHALEKTKYPDSD--IYWK-------------N---LDDKYHFSCQFTADLIAMNHTDFIITSTFQEIAGSKDTVGQYE 473 (783)
Q Consensus 412 t~H~l~~~~~~~s~--~~~~-------------~---~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~~~~~~~~v~qy~ 473 (783)
.+| ++..-.+.. ...+ . .............+...++.||.|+++|....+.+++..+
T Consensus 135 y~h--~P~~~~d~l~~~~~~~~~~~~~~~~~~~~~~~~~k~~y~~~~~~~~~~~~~~aD~ii~~S~~~~~~~~~~~~--- 209 (419)
T cd03806 135 YVH--YPTISTDMLQKVRSREASYNNSATIARSPVLSKAKLLYYRLFAFLYGLAGSFADVVMVNSTWTRNHIRSLWK--- 209 (419)
T ss_pred Eec--CCcchHHHHHHHhhccccccCccchhccchHHHHHHHHHHHHHHHHHHHhhcCCEEEECCHHHHHHHHHHhC---
Confidence 999 221000000 0000 0 0000000000124667899999999999877664433210
Q ss_pred cccccccccceeeeccCCCCCCcEEEecCCccCCCCCCCchHHHhhccCchhhHHhhcChhhhhhhhccccCCCCcEEEE
Q 003962 474 SHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEEKRRLKSFHPEIEELLYSDVENKEHLCVLKDRNKPILFT 553 (783)
Q Consensus 474 ~~~~f~~p~l~~v~~gi~~~~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~~~~~l~~~~~~~~~~gll~~~~k~iIl~ 553 (783)
. ..++.||+||+|.+.|.+.... ...++++|+|
T Consensus 210 -----------------~--~~~~~vi~~gvd~~~~~~~~~~----------------------------~~~~~~~il~ 242 (419)
T cd03806 210 -----------------R--NTKPSIVYPPCDVEELLKLPLD----------------------------EKTRENQILS 242 (419)
T ss_pred -----------------c--CCCcEEEcCCCCHHHhcccccc----------------------------cccCCcEEEE
Confidence 1 2478999999998776543210 0345679999
Q ss_pred EecccCCCCHHHHHHHHHHhHccCC-----CeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHHcCCCCcEEEccCCCCcC
Q 003962 554 MARLDRVKNLTGLVEWYGKNAKLRE-----LVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRV 628 (783)
Q Consensus 554 vGRL~~~Kgl~~LieA~~~l~~~~~-----~~~LvIVG~g~~~~~~~~ee~~~~~~l~~li~~~~L~~~V~flG~~~~~~ 628 (783)
+||+.+.||++.+++|+.++.+..+ +++|+|+|++... +...+.++++++++++++.++|.|+| .+
T Consensus 243 vgr~~~~K~~~~li~A~~~l~~~~~~~~~~~~~lvivG~~~~~-----~~~~~~~~L~~~~~~l~l~~~V~f~g----~v 313 (419)
T cd03806 243 IAQFRPEKNHPLQLRAFAKLLKRLPEEIKEKIKLVLIGSCRNE-----DDEKRVEDLKLLAKELGLEDKVEFVV----NA 313 (419)
T ss_pred EEeecCCCCHHHHHHHHHHHHHhCcccccCceEEEEEcCCCCc-----ccHHHHHHHHHHHHHhCCCCeEEEec----CC
Confidence 9999999999999999999987665 4999999998642 11235678899999999999999999 78
Q ss_pred ChHHHHHHHHccCcEEEeCCCCCCCcHHHHHHHHcCCcEEEcCcccc-ccccc---cCceEEEECCCCHHHHHHHHHHHH
Q 003962 629 RNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGP-AEIIV---NGKSGYHIDPYHGEQAAEILVDFF 704 (783)
Q Consensus 629 ~~~el~~~ia~aadvfV~PS~~E~fGltvlEAMa~GlPVVat~~GG~-~EiI~---dg~~G~li~p~d~e~lAeaI~~~l 704 (783)
+.+++..+++. +|++|+|+..|+||++++|||+||+|||+++.||+ .|++. +|.+|++++ |++++|++|.+++
T Consensus 314 ~~~~l~~~l~~-adv~v~~s~~E~Fgi~~lEAMa~G~pvIa~~~ggp~~~iv~~~~~g~~G~l~~--d~~~la~ai~~ll 390 (419)
T cd03806 314 PFEELLEELST-ASIGLHTMWNEHFGIGVVEYMAAGLIPLAHASGGPLLDIVVPWDGGPTGFLAS--TAEEYAEAIEKIL 390 (419)
T ss_pred CHHHHHHHHHh-CeEEEECCccCCcccHHHHHHHcCCcEEEEcCCCCchheeeccCCCCceEEeC--CHHHHHHHHHHHH
Confidence 88999999996 99999999999999999999999999999999886 57887 899999985 9999999997776
Q ss_pred HHhhCCH-HHHHHHHHHHHHHHHHhCCHHHHHH
Q 003962 705 EKCKADP-SYWDKISLGGLKRIEEKYTWKIYSQ 736 (783)
Q Consensus 705 ~~l~~dp-~~~~~ms~~a~~~v~~~ysw~~~a~ 736 (783)
+++ ..++.+ .++++.+.++|||+.+.+
T Consensus 391 ----~~~~~~~~~~-~~~~~~~~~~fs~~~f~~ 418 (419)
T cd03806 391 ----SLSEEERLRI-RRAARSSVKRFSDEEFER 418 (419)
T ss_pred ----hCCHHHHHHH-HHHHHHHHHhhCHHHhcc
Confidence 544 455555 555555779999998754
No 51
>cd03820 GT1_amsD_like This family is most closely related to the GT1 family of glycosyltransferases. AmSD in Erwinia amylovora has been shown to be involved in the biosynthesis of amylovoran, the acidic exopolysaccharide acting as a virulence factor. This enzyme may be responsible for the formation of galactose alpha-1,6 linkages in amylovoran.
Probab=100.00 E-value=3.6e-32 Score=291.18 Aligned_cols=345 Identities=17% Similarity=0.233 Sum_probs=249.9
Q ss_pred eEEEEcccccccccCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHHCCCceeeceeEEeCCCCCCCCCcccceeeeecCc
Q 003962 256 NVVILTPHGYFAQDDVLGYPDTGGQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRLLPDAVGTTCGQRLEKVYGT 335 (783)
Q Consensus 256 rI~iis~h~~~~~~~~lg~p~tGG~~vyv~d~araL~~eLa~~L~~~GheV~~~i~VvT~~~~~~~g~~~~~~~e~i~~~ 335 (783)
||++++++.. + .||...++. +|++.|+++||+|+ +++....+. . . ....
T Consensus 1 kI~i~~~~~~---------~-~gG~~~~~~--------~l~~~L~~~g~~v~----v~~~~~~~~--~----~---~~~~ 49 (348)
T cd03820 1 KILFVIPSLG---------N-AGGAERVLS--------NLANALAEKGHEVT----IISLDKGEP--P----F---YELD 49 (348)
T ss_pred CeEEEecccc---------C-CCChHHHHH--------HHHHHHHhCCCeEE----EEecCCCCC--C----c---cccC
Confidence 6888886654 1 689999999 67777888999999 888654320 0 0 0111
Q ss_pred cCeEEEEeccCCCccccccccccccchhhHHHHHHHHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHhcC-CcEEEEec
Q 003962 336 KYSDILRVPFRTEKGVVRKWISRFEVWPYLETYTEDVAVEIAKELQGKPDLIIGNYSDGNIVASLLAHKLG-VTQCTIAH 414 (783)
Q Consensus 336 ~~v~Ilrvp~~~~~~~~~~~isr~~i~~~l~~f~~~~~~~l~~~l~~~pDIIh~h~~~~~lva~llar~lg-vp~v~t~H 414 (783)
.++.+..++....... . ..+ .+... ...+++ ..+||+||++.+. ....+.....+ +|++.+.|
T Consensus 50 ~~~~~~~~~~~~~~~~----~---~~~----~~~~~-~~~~l~--~~~~d~i~~~~~~--~~~~~~~~~~~~~~~i~~~~ 113 (348)
T cd03820 50 PKIKVIDLGDKRDSKL----L---ARF----KKLRR-LRKLLK--NNKPDVVISFLTS--LLTFLASLGLKIVKLIVSEH 113 (348)
T ss_pred Cccceeecccccccch----h---ccc----cchHH-HHHhhc--ccCCCEEEEcCch--HHHHHHHHhhccccEEEecC
Confidence 2345555544321100 0 000 01111 122222 2589999999876 22222333344 49999999
Q ss_pred CCCccCCCCCchhhhhccccccccchhhHhHHhhhcCCEEEcCCHHHHhhccccccccccccccccccceeeeccCCCCC
Q 003962 415 ALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFD 494 (783)
Q Consensus 415 ~l~~~~~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~~~~~~~~v~qy~~~~~f~~p~l~~v~~gi~~~~ 494 (783)
+....... ...+ .......++.+|.+++.|...... . .....
T Consensus 114 ~~~~~~~~--~~~~------------~~~~~~~~~~~d~ii~~s~~~~~~---~---------------------~~~~~ 155 (348)
T cd03820 114 NSPDAYKK--RLRR------------LLLRRLLYRRADAVVVLTEEDRAL---Y---------------------YKKFN 155 (348)
T ss_pred CCccchhh--hhHH------------HHHHHHHHhcCCEEEEeCHHHHHH---h---------------------hccCC
Confidence 75322100 0000 012456789999999999876410 0 01126
Q ss_pred CcEEEecCCccCCCCCCCchHHHhhccCchhhHHhhcChhhhhhhhccccCCCCcEEEEEecccCCCCHHHHHHHHHHhH
Q 003962 495 PKFNIVSPGADMSIYFPYTEEKRRLKSFHPEIEELLYSDVENKEHLCVLKDRNKPILFTMARLDRVKNLTGLVEWYGKNA 574 (783)
Q Consensus 495 ~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~~~~~l~~~~~~~~~~gll~~~~k~iIl~vGRL~~~Kgl~~LieA~~~l~ 574 (783)
.++.++|||+|...+.+. ...+++.++++|++.+.||++.+++++.++.
T Consensus 156 ~~~~vi~~~~~~~~~~~~-------------------------------~~~~~~~i~~~g~~~~~K~~~~l~~~~~~l~ 204 (348)
T cd03820 156 KNVVVIPNPLPFPPEEPS-------------------------------SDLKSKRILAVGRLVPQKGFDLLIEAWAKIA 204 (348)
T ss_pred CCeEEecCCcChhhcccc-------------------------------CCCCCcEEEEEEeeccccCHHHHHHHHHHHH
Confidence 689999999998755432 0356778999999999999999999999998
Q ss_pred ccCCCeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHHcCCCCcEEEccCCCCcCChHHHHHHHHccCcEEEeCCCCCCCc
Q 003962 575 KLRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFG 654 (783)
Q Consensus 575 ~~~~~~~LvIVG~g~~~~~~~~ee~~~~~~l~~li~~~~L~~~V~flG~~~~~~~~~el~~~ia~aadvfV~PS~~E~fG 654 (783)
+..++++|+|+|++.. ...+.++++++++.++|.+.|. .+++..+++. +|+++.||.+|+||
T Consensus 205 ~~~~~~~l~i~G~~~~-----------~~~~~~~~~~~~~~~~v~~~g~------~~~~~~~~~~-ad~~i~ps~~e~~~ 266 (348)
T cd03820 205 KKHPDWKLRIVGDGPE-----------REALEALIKELGLEDRVILLGF------TKNIEEYYAK-ASIFVLTSRFEGFP 266 (348)
T ss_pred hcCCCeEEEEEeCCCC-----------HHHHHHHHHHcCCCCeEEEcCC------cchHHHHHHh-CCEEEeCccccccC
Confidence 8889999999999865 2566778889999999999993 4678888886 99999999999999
Q ss_pred HHHHHHHHcCCcEEEcCcc-ccccccccCceEEEECCCCHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhCCHHH
Q 003962 655 LTVVEAMTCGLPTFATCKG-GPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEEKYTWKI 733 (783)
Q Consensus 655 ltvlEAMa~GlPVVat~~G-G~~EiI~dg~~G~li~p~d~e~lAeaI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~~ 733 (783)
++++|||+||+|||+|+.+ +..+++.++.+|+++++.|+++++++|.+++ .||+.+++|++++++.+ ++|+|+.
T Consensus 267 ~~~~Ea~a~G~Pvi~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~ll----~~~~~~~~~~~~~~~~~-~~~~~~~ 341 (348)
T cd03820 267 MVLLEAMAFGLPVISFDCPTGPSEIIEDGVNGLLVPNGDVEALAEALLRLM----EDEELRKRMGANARESA-ERFSIEN 341 (348)
T ss_pred HHHHHHHHcCCCEEEecCCCchHhhhccCcceEEeCCCCHHHHHHHHHHHH----cCHHHHHHHHHHHHHHH-HHhCHHH
Confidence 9999999999999999865 5677888888999999999999999997765 89999999999997655 8899999
Q ss_pred HHHHHH
Q 003962 734 YSQRLL 739 (783)
Q Consensus 734 ~a~~ll 739 (783)
++++|.
T Consensus 342 ~~~~~~ 347 (348)
T cd03820 342 IIKQWE 347 (348)
T ss_pred HHHHhc
Confidence 999875
No 52
>PLN02949 transferase, transferring glycosyl groups
Probab=100.00 E-value=5.3e-32 Score=308.57 Aligned_cols=394 Identities=18% Similarity=0.231 Sum_probs=258.1
Q ss_pred ccCCCcceEEEEcccccccccCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHHCCCceeeceeEEeCCCCCCCCCcccce
Q 003962 249 GRIPMVFNVVILTPHGYFAQDDVLGYPDTGGQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRLLPDAVGTTCGQR 328 (783)
Q Consensus 249 ~~~pm~~rI~iis~h~~~~~~~~lg~p~tGG~~vyv~d~araL~~eLa~~L~~~GheV~~~i~VvT~~~~~~~g~~~~~~ 328 (783)
+|....++|+++.|+-. ..||.+..+.+-+++ |.++|+++. |.|.|... +... .+.
T Consensus 28 ~~~~~~~~v~f~HP~~~----------~ggG~ERvl~~a~~~--------l~~~~~~~~--v~iyt~~~-d~~~---~~~ 83 (463)
T PLN02949 28 ARRSRKRAVGFFHPYTN----------DGGGGERVLWCAVRA--------IQEENPDLD--CVIYTGDH-DASP---DSL 83 (463)
T ss_pred cccCCCcEEEEECCCCC----------CCCChhhHHHHHHHH--------HHhhCCCCe--EEEEcCCC-CCCH---HHH
Confidence 44455678999976653 337999999966665 477898544 33777552 2111 111
Q ss_pred eeeecCccCeEE------EEeccCCCccccccccccccchhhHH---HHHHHHHHHHHHHcCCCceEEEEcCCCchHHHH
Q 003962 329 LEKVYGTKYSDI------LRVPFRTEKGVVRKWISRFEVWPYLE---TYTEDVAVEIAKELQGKPDLIIGNYSDGNIVAS 399 (783)
Q Consensus 329 ~e~i~~~~~v~I------lrvp~~~~~~~~~~~isr~~i~~~l~---~f~~~~~~~l~~~l~~~pDIIh~h~~~~~lva~ 399 (783)
+.....+-++++ +++.. ++|+.+ ..|+++. +....+...+.......||+++-....+ ...
T Consensus 84 l~~~~~~~~i~~~~~~~~v~l~~-------~~~~~~-~~~~~~t~~~~~~~~~~l~~~~~~~~~p~v~vDt~~~~--~~~ 153 (463)
T PLN02949 84 AARARDRFGVELLSPPKVVHLRK-------RKWIEE-ETYPRFTMIGQSLGSVYLAWEALCKFTPLYFFDTSGYA--FTY 153 (463)
T ss_pred HHHHHhhcceecCCCceEEEecc-------cccccc-ccCCceehHHHHHHHHHHHHHHHHhcCCCEEEeCCCcc--cHH
Confidence 111111222221 11111 245543 4455422 2222211111111123566555322212 222
Q ss_pred HHHHhcCCcEEEEecCCCccC------------CCC----Cchhhhhcc-ccccccchh-hHhHHhhhcCCEEEcCCHHH
Q 003962 400 LLAHKLGVTQCTIAHALEKTK------------YPD----SDIYWKNLD-DKYHFSCQF-TADLIAMNHTDFIITSTFQE 461 (783)
Q Consensus 400 llar~lgvp~v~t~H~l~~~~------------~~~----s~~~~~~~~-~~y~f~~~~-~~e~~a~~~AD~IIt~S~~~ 461 (783)
.+++..++|+++.+|-..... +.. ....|.... ..|+ ..+ ..+....+.||.|+++|...
T Consensus 154 pl~~~~~~~v~~yvH~p~~~~dm~~~v~~~~~~~~~~~~~a~~~~~~~~k~~Y~--~~~~~l~~~~~~~ad~ii~nS~~t 231 (463)
T PLN02949 154 PLARLFGCKVVCYTHYPTISSDMISRVRDRSSMYNNDASIARSFWLSTCKILYY--RAFAWMYGLVGRCAHLAMVNSSWT 231 (463)
T ss_pred HHHHhcCCcEEEEEeCCcchHHHHHHHhhcccccCccchhhccchhHHHHHHHH--HHHHHHHHHHcCCCCEEEECCHHH
Confidence 334556999999999422110 000 000000000 0011 011 13445678999999999887
Q ss_pred HhhccccccccccccccccccceeeeccCCCCCCcEEEecCCccCCCCCCCchHHHhhccCchhhHHhhcChhhhhhhhc
Q 003962 462 IAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEEKRRLKSFHPEIEELLYSDVENKEHLC 541 (783)
Q Consensus 462 ~~~~~~~v~qy~~~~~f~~p~l~~v~~gi~~~~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~~~~~l~~~~~~~~~~g 541 (783)
.+.+++.. +. +.++.+++||+|.+.+.+....
T Consensus 232 ~~~l~~~~-------------------~~---~~~i~vvyp~vd~~~~~~~~~~-------------------------- 263 (463)
T PLN02949 232 KSHIEALW-------------------RI---PERIKRVYPPCDTSGLQALPLE-------------------------- 263 (463)
T ss_pred HHHHHHHc-------------------CC---CCCeEEEcCCCCHHHcccCCcc--------------------------
Confidence 66443321 11 3478899999997655221100
Q ss_pred cccCCCCcEEEEEecccCCCCHHHHHHHHHHhHc----cCCCeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHHcCCCCc
Q 003962 542 VLKDRNKPILFTMARLDRVKNLTGLVEWYGKNAK----LRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLNGQ 617 (783)
Q Consensus 542 ll~~~~k~iIl~vGRL~~~Kgl~~LieA~~~l~~----~~~~~~LvIVG~g~~~~~~~~ee~~~~~~l~~li~~~~L~~~ 617 (783)
.+.+++.++++||+.+.||++.+++|++++.+ ..++++|+|+|+++.. +...+.++++++++++++.++
T Consensus 264 --~~~~~~~il~vGR~~~~Kg~~llI~A~~~l~~~~~~~~~~~~LvIvG~~~~~-----~~~~~~~eL~~la~~l~L~~~ 336 (463)
T PLN02949 264 --RSEDPPYIISVAQFRPEKAHALQLEAFALALEKLDADVPRPKLQFVGSCRNK-----EDEERLQKLKDRAKELGLDGD 336 (463)
T ss_pred --ccCCCCEEEEEEeeeccCCHHHHHHHHHHHHHhccccCCCcEEEEEeCCCCc-----ccHHHHHHHHHHHHHcCCCCc
Confidence 02345789999999999999999999998764 2478999999998531 112455788899999999999
Q ss_pred EEEccCCCCcCChHHHHHHHHccCcEEEeCCCCCCCcHHHHHHHHcCCcEEEcCccccc-ccccc---CceEEEECCCCH
Q 003962 618 FRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPA-EIIVN---GKSGYHIDPYHG 693 (783)
Q Consensus 618 V~flG~~~~~~~~~el~~~ia~aadvfV~PS~~E~fGltvlEAMa~GlPVVat~~GG~~-EiI~d---g~~G~li~p~d~ 693 (783)
|.|+| .++.+++..+++. ++++|+||..|+||++++|||+||+|||+++.||+. |+|.+ |.+|++++ |+
T Consensus 337 V~f~g----~v~~~el~~ll~~-a~~~v~~s~~E~FGivvlEAMA~G~PVIa~~~gGp~~eIV~~~~~g~tG~l~~--~~ 409 (463)
T PLN02949 337 VEFHK----NVSYRDLVRLLGG-AVAGLHSMIDEHFGISVVEYMAAGAVPIAHNSAGPKMDIVLDEDGQQTGFLAT--TV 409 (463)
T ss_pred EEEeC----CCCHHHHHHHHHh-CcEEEeCCccCCCChHHHHHHHcCCcEEEeCCCCCcceeeecCCCCcccccCC--CH
Confidence 99999 6778999999996 999999999999999999999999999999999985 77765 67899885 89
Q ss_pred HHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Q 003962 694 EQAAEILVDFFEKCKADPSYWDKISLGGLKRIEEKYTWKIYSQRLLTLTGV 744 (783)
Q Consensus 694 e~lAeaI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~~~a~~ll~ly~~ 744 (783)
+++|++|.++++ .+++.+++|+++|++++ ++|||+.+++++.+.+..
T Consensus 410 ~~la~ai~~ll~---~~~~~r~~m~~~ar~~~-~~FS~e~~~~~~~~~i~~ 456 (463)
T PLN02949 410 EEYADAILEVLR---MRETERLEIAAAARKRA-NRFSEQRFNEDFKDAIRP 456 (463)
T ss_pred HHHHHHHHHHHh---CCHHHHHHHHHHHHHHH-HHcCHHHHHHHHHHHHHH
Confidence 999999977762 36888999999999998 779999999999998764
No 53
>PRK10125 putative glycosyl transferase; Provisional
Probab=100.00 E-value=1.1e-32 Score=310.15 Aligned_cols=278 Identities=15% Similarity=0.097 Sum_probs=193.9
Q ss_pred CCCceEEEEcCCCc---hHHH--H----HHHHhcCCcEEEEecCCCccC----CCCCchhhhhccc---c---c-----c
Q 003962 381 QGKPDLIIGNYSDG---NIVA--S----LLAHKLGVTQCTIAHALEKTK----YPDSDIYWKNLDD---K---Y-----H 436 (783)
Q Consensus 381 ~~~pDIIh~h~~~~---~lva--~----llar~lgvp~v~t~H~l~~~~----~~~s~~~~~~~~~---~---y-----~ 436 (783)
..+|||||.|...+ ++.. . +..+..++|+|.|.|+.+... ++.....|+.-+. . | .
T Consensus 92 ~~~pDviHlH~~~~~~~~~~~l~~~~~~~~~~~~~~piV~TlHd~~~~tg~c~~~~~C~~~~~~c~~Cp~l~~~~~~~~d 171 (405)
T PRK10125 92 TPGPVVLHFHVLHSYWLNLKSVVRFCEKVKNHKPDVTLVWTLHDHWSVTGRCAFTDGCEGWKTGCQKCPTLNNYPPVKVD 171 (405)
T ss_pred ccCCCEEEEecccCceecHHHHHHHHhhhhcccCCCCEEEecccccccCCCcCCCcccccccccCCCCCCccCCCCCccc
Confidence 45799999988765 3321 1 112345799999999976432 2222223332110 0 1 1
Q ss_pred cc-----chhhHhHHhhhcCCEEEcCCHHHHhhccccccccccccccccccceeeeccCCCCCCcEEEecCCccCCCCCC
Q 003962 437 FS-----CQFTADLIAMNHTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFP 511 (783)
Q Consensus 437 f~-----~~~~~e~~a~~~AD~IIt~S~~~~~~~~~~v~qy~~~~~f~~p~l~~v~~gi~~~~~k~~VIpnGvD~~~f~p 511 (783)
.+ .....-....+.++.+|++|...++.+.+. .+ ..++.|||||+|++.+.+
T Consensus 172 ~~~~~~~~k~~~~~~~~~~~~~iV~~S~~l~~~~~~~---------------------~~--~~~i~vI~NGid~~~~~~ 228 (405)
T PRK10125 172 RAHQLVAGKRQLFREMLALGCQFISPSQHVADAFNSL---------------------YG--PGRCRIINNGIDMATEAI 228 (405)
T ss_pred hHHHHHHHHHHHHHHHhhcCcEEEEcCHHHHHHHHHH---------------------cC--CCCEEEeCCCcCcccccc
Confidence 01 000011122346789999998776632211 12 468999999999754332
Q ss_pred CchHHHhhccCchhhHHhhcChhhhhhhhccccCCCCcEEEEEecc--cCCCCHHHHHHHHHHhHccCCCeEEEEEeCCC
Q 003962 512 YTEEKRRLKSFHPEIEELLYSDVENKEHLCVLKDRNKPILFTMARL--DRVKNLTGLVEWYGKNAKLRELVNLVVVGGDR 589 (783)
Q Consensus 512 ~~~~~~r~~~~~~~~~~~l~~~~~~~~~~gll~~~~k~iIl~vGRL--~~~Kgl~~LieA~~~l~~~~~~~~LvIVG~g~ 589 (783)
....... .. ++++++|+++|+. .+.||+..|++|+.++. ++++|+|+|+++
T Consensus 229 ~~~~~~~----------------------~~--~~~~~~il~v~~~~~~~~Kg~~~li~A~~~l~---~~~~L~ivG~g~ 281 (405)
T PRK10125 229 LAELPPV----------------------RE--TQGKPKIAVVAHDLRYDGKTDQQLVREMMALG---DKIELHTFGKFS 281 (405)
T ss_pred ccccccc----------------------cc--CCCCCEEEEEEeccccCCccHHHHHHHHHhCC---CCeEEEEEcCCC
Confidence 2111000 00 3467789999994 47899999999998763 579999999985
Q ss_pred CCCCccHHHHHHHHHHHHHHHHcCCCCcEEEccCCCCcCChHHHHHHHHccCcEEEeCCCCCCCcHHHHHHHHcCCcEEE
Q 003962 590 RKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFA 669 (783)
Q Consensus 590 ~~~~~~~ee~~~~~~l~~li~~~~L~~~V~flG~~~~~~~~~el~~~ia~aadvfV~PS~~E~fGltvlEAMa~GlPVVa 669 (783)
.. ...+|.++|... +..++..+|+. +|+||+||.+|+||++++||||||+|||+
T Consensus 282 ~~----------------------~~~~v~~~g~~~---~~~~l~~~y~~-aDvfV~pS~~Egfp~vilEAmA~G~PVVa 335 (405)
T PRK10125 282 PF----------------------TAGNVVNHGFET---DKRKLMSALNQ-MDALVFSSRVDNYPLILCEALSIGVPVIA 335 (405)
T ss_pred cc----------------------cccceEEecCcC---CHHHHHHHHHh-CCEEEECCccccCcCHHHHHHHcCCCEEE
Confidence 31 024688998544 34678888885 99999999999999999999999999999
Q ss_pred cCccccccccccCceEEEECCCCHHHHHHHHHHHHHHhhCCHHHHHH----HHHHHHHHHHHhCCHHHHHHHHHHHHHH
Q 003962 670 TCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDK----ISLGGLKRIEEKYTWKIYSQRLLTLTGV 744 (783)
Q Consensus 670 t~~GG~~EiI~dg~~G~li~p~d~e~lAeaI~~~l~~l~~dp~~~~~----ms~~a~~~v~~~ysw~~~a~~ll~ly~~ 744 (783)
|+.||++|+|.++ +|++++|+|++++|+++ ++...++ +.+++++++.++|||+.++++|+++|+.
T Consensus 336 t~~gG~~Eiv~~~-~G~lv~~~d~~~La~~~---------~~~~~~~~~~~~~~~~r~~~~~~fs~~~~~~~y~~lY~~ 404 (405)
T PRK10125 336 THSDAAREVLQKS-GGKTVSEEEVLQLAQLS---------KPEIAQAVFGTTLAEFSQRSRAAYSGQQMLEEYVNFYQN 404 (405)
T ss_pred eCCCChHHhEeCC-cEEEECCCCHHHHHhcc---------CHHHHHHhhhhHHHHHHHHHHHhCCHHHHHHHHHHHHHh
Confidence 9999999999875 99999999999999854 4444433 3456888988999999999999999964
No 54
>cd03809 GT1_mtfB_like This family is most closely related to the GT1 family of glycosyltransferases. mtfB (mannosyltransferase B) in E. coli has been shown to direct the growth of the O9-specific polysaccharide chain. It transfers two mannoses into the position 3 of the previously synthesized polysaccharide.
Probab=100.00 E-value=1.1e-32 Score=300.03 Aligned_cols=364 Identities=20% Similarity=0.234 Sum_probs=256.4
Q ss_pred eEEEEcccccccccCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHHCCCceeeceeEEeCCCCCCCCCcccceeeeecCc
Q 003962 256 NVVILTPHGYFAQDDVLGYPDTGGQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRLLPDAVGTTCGQRLEKVYGT 335 (783)
Q Consensus 256 rI~iis~h~~~~~~~~lg~p~tGG~~vyv~d~araL~~eLa~~L~~~GheV~~~i~VvT~~~~~~~g~~~~~~~e~i~~~ 335 (783)
||++++.+..++ ..||.+.|+. +|+++|++.||+|+ +++............ ..
T Consensus 1 ~ili~~~~~~~~--------~~gG~~~~~~--------~l~~~L~~~~~~v~----~~~~~~~~~~~~~~~-----~~-- 53 (365)
T cd03809 1 RILIDARFLASR--------RPTGIGRYAR--------ELLRALLKLDPEEV----LLLLPGAPGLLLLPL-----RA-- 53 (365)
T ss_pred CEEEechhhhcC--------CCCcHHHHHH--------HHHHHHHhcCCceE----EEEecCccccccccc-----hh--
Confidence 578888666521 5799999999 67777899999999 777653322110000 00
Q ss_pred cCeEEEEeccCCCccccccccccccchhhHHHHHHHHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHhcCCcEEEEecC
Q 003962 336 KYSDILRVPFRTEKGVVRKWISRFEVWPYLETYTEDVAVEIAKELQGKPDLIIGNYSDGNIVASLLAHKLGVTQCTIAHA 415 (783)
Q Consensus 336 ~~v~Ilrvp~~~~~~~~~~~isr~~i~~~l~~f~~~~~~~l~~~l~~~pDIIh~h~~~~~lva~llar~lgvp~v~t~H~ 415 (783)
.... .... .....+.............+. ..+||+||++++..... +..++|+++++|+
T Consensus 54 -~~~~---~~~~---------~~~~~~~~~~~~~~~~~~~~~---~~~~Dii~~~~~~~~~~-----~~~~~~~i~~~hd 112 (365)
T cd03809 54 -ALRL---LLRL---------PRRLLWGLLFLLRAGDRLLLL---LLGLDLLHSPHNTAPLL-----RLRGVPVVVTIHD 112 (365)
T ss_pred -cccc---cccc---------ccccccchhhHHHHHHHHHhh---hcCCCeeeecccccCcc-----cCCCCCEEEEecc
Confidence 0000 0000 001111111111111111111 25899999998766433 6679999999998
Q ss_pred CCccCCCCCchhhhhccccccccchhhHhHHhhhcCCEEEcCCHHHHhhccccccccccccccccccceeeeccCCCCCC
Q 003962 416 LEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDP 495 (783)
Q Consensus 416 l~~~~~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~~~~~~~~v~qy~~~~~f~~p~l~~v~~gi~~~~~ 495 (783)
+.....+.....+ ............++.+|.++++|+..++.+.+.. +++ ..
T Consensus 113 ~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~d~~i~~s~~~~~~~~~~~-------------------~~~--~~ 164 (365)
T cd03809 113 LIPLRFPEYFSPG-------FRRYFRRLLRRALRRADAIITVSEATKRDLLRYL-------------------GVP--PD 164 (365)
T ss_pred chhhhCcccCCHH-------HHHHHHHHHHHHHHHcCEEEEccHHHHHHHHHHh-------------------CcC--HH
Confidence 7543332211111 0001112345678999999999988776433321 111 56
Q ss_pred cEEEecCCccCCCCCCCchHHHhhccCchhhHHhhcChhhhhhhhccccCCCCcEEEEEecccCCCCHHHHHHHHHHhHc
Q 003962 496 KFNIVSPGADMSIYFPYTEEKRRLKSFHPEIEELLYSDVENKEHLCVLKDRNKPILFTMARLDRVKNLTGLVEWYGKNAK 575 (783)
Q Consensus 496 k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~~~~~l~~~~~~~~~~gll~~~~k~iIl~vGRL~~~Kgl~~LieA~~~l~~ 575 (783)
++.++|||+|...+.+...... ..... ..+++.|+++||+.+.||++.+++++..+.+
T Consensus 165 ~~~vi~~~~~~~~~~~~~~~~~--------------------~~~~~--~~~~~~i~~~G~~~~~K~~~~~l~~~~~~~~ 222 (365)
T cd03809 165 KIVVIPLGVDPRFRPPPAEAEV--------------------LRALY--LLPRPYFLYVGTIEPRKNLERLLEAFARLPA 222 (365)
T ss_pred HEEeeccccCccccCCCchHHH--------------------HHHhc--CCCCCeEEEeCCCccccCHHHHHHHHHHHHH
Confidence 8999999999887766543210 11122 4567899999999999999999999999998
Q ss_pred cCCCeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHHcCCCCcEEEccCCCCcCChHHHHHHHHccCcEEEeCCCCCCCcH
Q 003962 576 LRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGL 655 (783)
Q Consensus 576 ~~~~~~LvIVG~g~~~~~~~~ee~~~~~~l~~li~~~~L~~~V~flG~~~~~~~~~el~~~ia~aadvfV~PS~~E~fGl 655 (783)
..++++|+++|.+... .......+++.+..++|.|+| .++.+++..+++. +|++++||.+|+||+
T Consensus 223 ~~~~~~l~i~G~~~~~----------~~~~~~~~~~~~~~~~v~~~g----~~~~~~~~~~~~~-~d~~l~ps~~e~~~~ 287 (365)
T cd03809 223 KGPDPKLVIVGKRGWL----------NEELLARLRELGLGDRVRFLG----YVSDEELAALYRG-ARAFVFPSLYEGFGL 287 (365)
T ss_pred hcCCCCEEEecCCccc----------cHHHHHHHHHcCCCCeEEECC----CCChhHHHHHHhh-hhhhcccchhccCCC
Confidence 8778999999987652 122223336678889999999 7778899999995 999999999999999
Q ss_pred HHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhCCHHHHH
Q 003962 656 TVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEEKYTWKIYS 735 (783)
Q Consensus 656 tvlEAMa~GlPVVat~~GG~~EiI~dg~~G~li~p~d~e~lAeaI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~~~a 735 (783)
+++|||+||+|||+|+.|+..|++. .+|++++++|+++++++|.+++ .|++.+.++++++++.+ ++|||+..+
T Consensus 288 ~~~Ea~a~G~pvI~~~~~~~~e~~~--~~~~~~~~~~~~~~~~~i~~l~----~~~~~~~~~~~~~~~~~-~~~sw~~~~ 360 (365)
T cd03809 288 PVLEAMACGTPVIASNISSLPEVAG--DAALYFDPLDPEALAAAIERLL----EDPALREELRERGLARA-KRFSWEKTA 360 (365)
T ss_pred CHHHHhcCCCcEEecCCCCccceec--CceeeeCCCCHHHHHHHHHHHh----cCHHHHHHHHHHHHHHH-HhCCHHHHH
Confidence 9999999999999999999999984 4699999999999999996655 89999999999999665 889999999
Q ss_pred HHHH
Q 003962 736 QRLL 739 (783)
Q Consensus 736 ~~ll 739 (783)
++++
T Consensus 361 ~~~~ 364 (365)
T cd03809 361 RRTL 364 (365)
T ss_pred HHHh
Confidence 9886
No 55
>cd03808 GT1_cap1E_like This family is most closely related to the GT1 family of glycosyltransferases. cap1E in Streptococcus pneumoniae is required for the synthesis of type 1 capsular polysaccharides.
Probab=100.00 E-value=7.9e-32 Score=289.84 Aligned_cols=356 Identities=18% Similarity=0.275 Sum_probs=257.6
Q ss_pred eEEEEcccccccccCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHHCCCceeeceeEEeCCCCCCCCCcccceeeeecCc
Q 003962 256 NVVILTPHGYFAQDDVLGYPDTGGQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRLLPDAVGTTCGQRLEKVYGT 335 (783)
Q Consensus 256 rI~iis~h~~~~~~~~lg~p~tGG~~vyv~d~araL~~eLa~~L~~~GheV~~~i~VvT~~~~~~~g~~~~~~~e~i~~~ 335 (783)
||+++++. .||.+.++. +|++.|.++||+|+ +++....... ....
T Consensus 1 kIl~i~~~-------------~~g~~~~~~--------~l~~~L~~~g~~v~----~~~~~~~~~~----------~~~~ 45 (359)
T cd03808 1 KILHIVTV-------------DGGLYSFRL--------PLIKALRAAGYEVH----VVAPPGDELE----------ELEA 45 (359)
T ss_pred CeeEEEec-------------chhHHHHHH--------HHHHHHHhcCCeeE----EEecCCCccc----------cccc
Confidence 57777754 378888888 67777889999999 8876533221 1112
Q ss_pred cCeEEEEeccCCCccccccccccccchhhHHHHHHHHHHHHHHHcCCCceEEEEcCCCchHHHHHHHH-hcCCcEEEEec
Q 003962 336 KYSDILRVPFRTEKGVVRKWISRFEVWPYLETYTEDVAVEIAKELQGKPDLIIGNYSDGNIVASLLAH-KLGVTQCTIAH 414 (783)
Q Consensus 336 ~~v~Ilrvp~~~~~~~~~~~isr~~i~~~l~~f~~~~~~~l~~~l~~~pDIIh~h~~~~~lva~llar-~lgvp~v~t~H 414 (783)
.++.++.+|..... . ..+..+..+ .. ...+.. +.+||+||++...+...+.+.++ ..+.+++.+.|
T Consensus 46 ~~~~~~~~~~~~~~------~---~~~~~~~~~-~~-~~~~~~--~~~~dvv~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 112 (359)
T cd03808 46 LGVKVIPIPLDRRG------I---NPFKDLKAL-LR-LYRLLR--KERPDIVHTHTPKPGILGRLAARLAGVPKVIYTVH 112 (359)
T ss_pred CCceEEeccccccc------c---ChHhHHHHH-HH-HHHHHH--hcCCCEEEEccccchhHHHHHHHHcCCCCEEEEec
Confidence 35666666664310 1 111111111 11 122222 35799999998777777777776 44567777888
Q ss_pred CCCccCCCCCchhhhhccccccccchhhHhHHhhhcCCEEEcCCHHHHhhccccccccccccccccccceeeeccCCCCC
Q 003962 415 ALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFD 494 (783)
Q Consensus 415 ~l~~~~~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~~~~~~~~v~qy~~~~~f~~p~l~~v~~gi~~~~ 494 (783)
+........ ...+. .....++..++.+|.+++.|+...+.+.+.. ..+ ..
T Consensus 113 ~~~~~~~~~-~~~~~---------~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~~-------------------~~~-~~ 162 (359)
T cd03808 113 GLGFVFTSG-GLKRR---------LYLLLERLALRFTDKVIFQNEDDRDLALKLG-------------------IIK-KK 162 (359)
T ss_pred Ccchhhccc-hhHHH---------HHHHHHHHHHhhccEEEEcCHHHHHHHHHhc-------------------CCC-cC
Confidence 754322111 00000 0112345678899999999988766332220 111 13
Q ss_pred CcEEEecCCccCCCCCCCchHHHhhccCchhhHHhhcChhhhhhhhccccCCCCcEEEEEecccCCCCHHHHHHHHHHhH
Q 003962 495 PKFNIVSPGADMSIYFPYTEEKRRLKSFHPEIEELLYSDVENKEHLCVLKDRNKPILFTMARLDRVKNLTGLVEWYGKNA 574 (783)
Q Consensus 495 ~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~~~~~l~~~~~~~~~~gll~~~~k~iIl~vGRL~~~Kgl~~LieA~~~l~ 574 (783)
.++.+++||+|.+.+.+.... .+.+++.|+++||+.+.||++.+++++..+.
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~----------------------------~~~~~~~i~~~G~~~~~k~~~~li~~~~~l~ 214 (359)
T cd03808 163 KTVLIPGSGVDLDRFSPSPEP----------------------------IPEDDPVFLFVARLLKDKGIDELLEAARILK 214 (359)
T ss_pred ceEEecCCCCChhhcCccccc----------------------------cCCCCcEEEEEeccccccCHHHHHHHHHHHH
Confidence 467788999998766543221 0356789999999999999999999999998
Q ss_pred ccCCCeEEEEEeCCCCCCCccHHHHHHHHHHHH-HHHHcCCCCcEEEccCCCCcCChHHHHHHHHccCcEEEeCCCCCCC
Q 003962 575 KLRELVNLVVVGGDRRKESKDLEEQAEMKKMYS-LIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAF 653 (783)
Q Consensus 575 ~~~~~~~LvIVG~g~~~~~~~~ee~~~~~~l~~-li~~~~L~~~V~flG~~~~~~~~~el~~~ia~aadvfV~PS~~E~f 653 (783)
+..++++|+|+|++... ..... .+.+.+..++|.|+|. .+++..+++. +|++++||..|+|
T Consensus 215 ~~~~~~~l~i~G~~~~~-----------~~~~~~~~~~~~~~~~v~~~g~------~~~~~~~~~~-adi~i~ps~~e~~ 276 (359)
T cd03808 215 AKGPNVRLLLVGDGDEE-----------NPAAILEIEKLGLEGRVEFLGF------RDDVPELLAA-ADVFVLPSYREGL 276 (359)
T ss_pred hcCCCeEEEEEcCCCcc-----------hhhHHHHHHhcCCcceEEEeec------cccHHHHHHh-ccEEEecCcccCc
Confidence 87889999999999762 11111 3666777889999994 3568888885 9999999999999
Q ss_pred cHHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhCCHHH
Q 003962 654 GLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEEKYTWKI 733 (783)
Q Consensus 654 GltvlEAMa~GlPVVat~~GG~~EiI~dg~~G~li~p~d~e~lAeaI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~~ 733 (783)
|++++|||+||+|||+|+.++..|++.++.+|++++++|+++++++|.+++ .|++.++++++++++.+.++|||+.
T Consensus 277 ~~~~~Ea~~~G~Pvi~s~~~~~~~~i~~~~~g~~~~~~~~~~~~~~i~~l~----~~~~~~~~~~~~~~~~~~~~~s~~~ 352 (359)
T cd03808 277 PRVLLEAMAMGRPVIATDVPGCREAVIDGVNGFLVPPGDAEALADAIERLI----EDPELRARMGQAARKRAEEEFDEEI 352 (359)
T ss_pred chHHHHHHHcCCCEEEecCCCchhhhhcCcceEEECCCCHHHHHHHHHHHH----hCHHHHHHHHHHHHHHHHHhcCHHH
Confidence 999999999999999999999999999999999999999999999997655 8999999999999999999999999
Q ss_pred HHHHHH
Q 003962 734 YSQRLL 739 (783)
Q Consensus 734 ~a~~ll 739 (783)
++++++
T Consensus 353 ~~~~~~ 358 (359)
T cd03808 353 VVKKLL 358 (359)
T ss_pred HHHHhh
Confidence 999876
No 56
>cd03823 GT1_ExpE7_like This family is most closely related to the GT1 family of glycosyltransferases. ExpE7 in Sinorhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucans (exopolysaccharide II).
Probab=100.00 E-value=8.8e-32 Score=291.40 Aligned_cols=354 Identities=15% Similarity=0.178 Sum_probs=246.5
Q ss_pred eEEEEcccccccccCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHHCCCceeeceeEEeCCCCCCCCCcccceeeeecCc
Q 003962 256 NVVILTPHGYFAQDDVLGYPDTGGQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRLLPDAVGTTCGQRLEKVYGT 335 (783)
Q Consensus 256 rI~iis~h~~~~~~~~lg~p~tGG~~vyv~d~araL~~eLa~~L~~~GheV~~~i~VvT~~~~~~~g~~~~~~~e~i~~~ 335 (783)
||++++++..+ ..+||.+.++. .|+++|+++||+|+ +++.......... . .
T Consensus 1 kIl~i~~~~~~--------~~~gG~~~~~~--------~l~~~L~~~g~~v~----v~~~~~~~~~~~~-~--------~ 51 (359)
T cd03823 1 RILVVNHLYPP--------RSVGGAEVVAH--------DLAEALAKRGHEVA----VLTAGEDPPRQDK-E--------V 51 (359)
T ss_pred CeeEEcccCCc--------ccccchHHHHH--------HHHHHHHhcCCceE----EEeCCCCCCCccc-c--------c
Confidence 68899866543 24699999999 66666789999999 8876533221110 0 0
Q ss_pred cCeEEEEecc--CCCccccccccccccchhhHHHHHHHHHHHHHHHcCCCceEEEEcCCCc-hHHHHHHHHhcCCcEEEE
Q 003962 336 KYSDILRVPF--RTEKGVVRKWISRFEVWPYLETYTEDVAVEIAKELQGKPDLIIGNYSDG-NIVASLLAHKLGVTQCTI 412 (783)
Q Consensus 336 ~~v~Ilrvp~--~~~~~~~~~~isr~~i~~~l~~f~~~~~~~l~~~l~~~pDIIh~h~~~~-~lva~llar~lgvp~v~t 412 (783)
.+..+...+. ....... ........+...........+... .+||+||+|.... +......++..++|++++
T Consensus 52 ~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~--~~~dii~~~~~~~~~~~~~~~~~~~~~~~i~~ 126 (359)
T cd03823 52 IGVVVYGRPIDEVLRSALP---RDLFHLSDYDNPAVVAEFARLLED--FRPDVVHFHHLQGLGVSILRAARDRGIPIVLT 126 (359)
T ss_pred ccceeeccccccccCCCch---hhhhHHHhccCHHHHHHHHHHHHH--cCCCEEEECCccchHHHHHHHHHhcCCCEEEE
Confidence 0111111110 0000000 000001111111111222333332 4799999998754 334445667789999999
Q ss_pred ecCCCccCCCCCchhhhhccccccccchhhHhHHhhhcCCEEEcCCHHHHhhccccccccccccccccccceeeeccCCC
Q 003962 413 AHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDV 492 (783)
Q Consensus 413 ~H~l~~~~~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~~~~~~~~v~qy~~~~~f~~p~l~~v~~gi~~ 492 (783)
.|+...... +. .......|.++++|+...+.+.+. +..
T Consensus 127 ~hd~~~~~~------~~---------------~~~~~~~d~ii~~s~~~~~~~~~~--------------------~~~- 164 (359)
T cd03823 127 LHDYWLICP------RQ---------------GLFKKGGDAVIAPSRFLLDRYVAN--------------------GLF- 164 (359)
T ss_pred Eeeeeeecc------hh---------------hhhccCCCEEEEeCHHHHHHHHHc--------------------CCC-
Confidence 997532110 00 011223399999998776633221 121
Q ss_pred CCCcEEEecCCccCCCCCCCchHHHhhccCchhhHHhhcChhhhhhhhccccCCCCcEEEEEecccCCCCHHHHHHHHHH
Q 003962 493 FDPKFNIVSPGADMSIYFPYTEEKRRLKSFHPEIEELLYSDVENKEHLCVLKDRNKPILFTMARLDRVKNLTGLVEWYGK 572 (783)
Q Consensus 493 ~~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~~~~~l~~~~~~~~~~gll~~~~k~iIl~vGRL~~~Kgl~~LieA~~~ 572 (783)
..++.+|+||+|...+.+... +. +.++++++++||+.+.||++.+++++.+
T Consensus 165 -~~~~~vi~n~~~~~~~~~~~~--------------------------~~--~~~~~~i~~~G~~~~~k~~~~li~~~~~ 215 (359)
T cd03823 165 -AEKISVIRNGIDLDRAKRPRR--------------------------AP--PGGRLRFGFIGQLTPHKGVDLLLEAFKR 215 (359)
T ss_pred -ccceEEecCCcChhhcccccc--------------------------CC--CCCceEEEEEecCccccCHHHHHHHHHH
Confidence 468999999999887654321 01 4567889999999999999999999999
Q ss_pred hHccCCCeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHHcCCCCcEEEccCCCCcCChHHHHHHHHccCcEEEeCCC-CC
Q 003962 573 NAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPAL-YE 651 (783)
Q Consensus 573 l~~~~~~~~LvIVG~g~~~~~~~~ee~~~~~~l~~li~~~~L~~~V~flG~~~~~~~~~el~~~ia~aadvfV~PS~-~E 651 (783)
+.+ ++++|+++|+++.. ....... +..++|.++| .++.+++..+++. +|++++||. .|
T Consensus 216 l~~--~~~~l~i~G~~~~~-----------~~~~~~~---~~~~~v~~~g----~~~~~~~~~~~~~-ad~~i~ps~~~e 274 (359)
T cd03823 216 LPR--GDIELVIVGNGLEL-----------EEESYEL---EGDPRVEFLG----AYPQEEIDDFYAE-IDVLVVPSIWPE 274 (359)
T ss_pred HHh--cCcEEEEEcCchhh-----------hHHHHhh---cCCCeEEEeC----CCCHHHHHHHHHh-CCEEEEcCcccC
Confidence 876 78999999998652 1111111 5668999999 7778999999995 999999997 79
Q ss_pred CCcHHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhCCH
Q 003962 652 AFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEEKYTW 731 (783)
Q Consensus 652 ~fGltvlEAMa~GlPVVat~~GG~~EiI~dg~~G~li~p~d~e~lAeaI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw 731 (783)
+||++++|||+||+|||+|+.||..|++.++.+|++++++|+++++++|.+++ +|++.++++++++++....
T Consensus 275 ~~~~~~~Ea~a~G~Pvi~~~~~~~~e~i~~~~~g~~~~~~d~~~l~~~i~~l~----~~~~~~~~~~~~~~~~~~~---- 346 (359)
T cd03823 275 NFPLVIREALAAGVPVIASDIGGMAELVRDGVNGLLFPPGDAEDLAAALERLI----DDPDLLERLRAGIEPPRSI---- 346 (359)
T ss_pred CCChHHHHHHHCCCCEEECCCCCHHHHhcCCCcEEEECCCCHHHHHHHHHHHH----hChHHHHHHHHhHHHhhhH----
Confidence 99999999999999999999999999999999999999999999999997766 7999999999999887633
Q ss_pred HHHHHHHHHHHH
Q 003962 732 KIYSQRLLTLTG 743 (783)
Q Consensus 732 ~~~a~~ll~ly~ 743 (783)
+.++++++++|+
T Consensus 347 ~~~~~~~~~~~~ 358 (359)
T cd03823 347 EDQAEEYLKLYR 358 (359)
T ss_pred HHHHHHHHHHhh
Confidence 999999999875
No 57
>cd03798 GT1_wlbH_like This family is most closely related to the GT1 family of glycosyltransferases. wlbH in Bordetella parapertussis has been shown to be required for the biosynthesis of a trisaccharide that, when attached to the B. pertussis lipopolysaccharide (LPS) core (band B), generates band A LPS.
Probab=100.00 E-value=2.1e-31 Score=287.47 Aligned_cols=284 Identities=27% Similarity=0.437 Sum_probs=232.0
Q ss_pred CCCceEEEEcCCCc-hHHHHHHHHhcCCcEEEEecCCCccCCCCCchhhhhccccccccchhhHhHHhhhcCCEEEcCCH
Q 003962 381 QGKPDLIIGNYSDG-NIVASLLAHKLGVTQCTIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTF 459 (783)
Q Consensus 381 ~~~pDIIh~h~~~~-~lva~llar~lgvp~v~t~H~l~~~~~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~ 459 (783)
..+||+||+++... ...+..+++..++|++.+.|+.......... .........++.+|.+++.|+
T Consensus 91 ~~~~dii~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~~~-------------~~~~~~~~~~~~~d~ii~~s~ 157 (377)
T cd03798 91 RFRPDLIHAHFAYPDGFAAALLKRKLGIPLVVTLHGSDVNLLPRKR-------------LLRALLRRALRRADAVIAVSE 157 (377)
T ss_pred cCCCCEEEEeccchHHHHHHHHHHhcCCCEEEEeecchhcccCchh-------------hHHHHHHHHHhcCCeEEeCCH
Confidence 45899999987654 5667777888899999999986443321111 111234457889999999998
Q ss_pred HHHhhccccccccccccccccccceeeeccCCCCCCcEEEecCCccCCCCCCCchHHHhhccCchhhHHhhcChhhhhhh
Q 003962 460 QEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEEKRRLKSFHPEIEELLYSDVENKEH 539 (783)
Q Consensus 460 ~~~~~~~~~v~qy~~~~~f~~p~l~~v~~gi~~~~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~~~~~l~~~~~~~~~ 539 (783)
...+.+.+. + ....++.++|||+|...+.+...... ..
T Consensus 158 ~~~~~~~~~--------------------~--~~~~~~~~i~~~~~~~~~~~~~~~~~--------------------~~ 195 (377)
T cd03798 158 ALADELKAL--------------------G--IDPEKVTVIPNGVDTERFSPADRAEA--------------------RK 195 (377)
T ss_pred HHHHHHHHh--------------------c--CCCCceEEcCCCcCcccCCCcchHHH--------------------Hh
Confidence 877643321 1 12678999999999988876543211 01
Q ss_pred hccccCCCCcEEEEEecccCCCCHHHHHHHHHHhHccCCCeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHHcCCCCcEE
Q 003962 540 LCVLKDRNKPILFTMARLDRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLNGQFR 619 (783)
Q Consensus 540 ~gll~~~~k~iIl~vGRL~~~Kgl~~LieA~~~l~~~~~~~~LvIVG~g~~~~~~~~ee~~~~~~l~~li~~~~L~~~V~ 619 (783)
.+. ..+++.++++|++.+.||++.+++++..+.+..++++++++|.++. ...+.+.++++++.++|.
T Consensus 196 ~~~--~~~~~~i~~~g~~~~~k~~~~li~~~~~~~~~~~~~~l~i~g~~~~-----------~~~~~~~~~~~~~~~~v~ 262 (377)
T cd03798 196 LGL--PEDKKVILFVGRLVPRKGIDYLIEALARLLKKRPDVHLVIVGDGPL-----------REALEALAAELGLEDRVT 262 (377)
T ss_pred ccC--CCCceEEEEeccCccccCHHHHHHHHHHHHhcCCCeEEEEEcCCcc-----------hHHHHHHHHhcCCcceEE
Confidence 122 4567899999999999999999999999988888999999999864 356777788888889999
Q ss_pred EccCCCCcCChHHHHHHHHccCcEEEeCCCCCCCcHHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHHHHHHH
Q 003962 620 WISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEI 699 (783)
Q Consensus 620 flG~~~~~~~~~el~~~ia~aadvfV~PS~~E~fGltvlEAMa~GlPVVat~~GG~~EiI~dg~~G~li~p~d~e~lAea 699 (783)
+.| .++.+++..+++. +|++++|+..|++|++++|||+||+|||+++.|+..|++.++.+|++++++|+++++++
T Consensus 263 ~~g----~~~~~~~~~~~~~-ad~~i~~~~~~~~~~~~~Ea~~~G~pvI~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~ 337 (377)
T cd03798 263 FLG----AVPHEEVPAYYAA-ADVFVLPSLREGFGLVLLEAMACGLPVVATDVGGIPEIITDGENGLLVPPGDPEALAEA 337 (377)
T ss_pred EeC----CCCHHHHHHHHHh-cCeeecchhhccCChHHHHHHhcCCCEEEecCCChHHHhcCCcceeEECCCCHHHHHHH
Confidence 999 7788999999996 99999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Q 003962 700 LVDFFEKCKADPSYWDKISLGGLKRIEEKYTWKIYSQRLLTLTG 743 (783)
Q Consensus 700 I~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~~~a~~ll~ly~ 743 (783)
|.+++ +++.. +++.++++.+.++|||+..++++.++++
T Consensus 338 i~~~~----~~~~~--~~~~~~~~~~~~~~s~~~~~~~~~~~~~ 375 (377)
T cd03798 338 ILRLL----ADPWL--RLGRAARRRVAERFSWENVAERLLELYR 375 (377)
T ss_pred HHHHh----cCcHH--HHhHHHHHHHHHHhhHHHHHHHHHHHHh
Confidence 97766 78776 7888999999999999999999999875
No 58
>TIGR03087 stp1 sugar transferase, PEP-CTERM/EpsH1 system associated. Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate.
Probab=100.00 E-value=1.4e-32 Score=308.59 Aligned_cols=283 Identities=16% Similarity=0.162 Sum_probs=205.0
Q ss_pred CCceEEEEcCCCchHHHHHHH-HhcCCcEEEEecCCCccCCCCCc--hhhhhcccccccc--chhhHhHHhhhcCCEEEc
Q 003962 382 GKPDLIIGNYSDGNIVASLLA-HKLGVTQCTIAHALEKTKYPDSD--IYWKNLDDKYHFS--CQFTADLIAMNHTDFIIT 456 (783)
Q Consensus 382 ~~pDIIh~h~~~~~lva~lla-r~lgvp~v~t~H~l~~~~~~~s~--~~~~~~~~~y~f~--~~~~~e~~a~~~AD~IIt 456 (783)
.++|+||+++...+ ..+. +..++|.|++.|+.+...+.... ..+. ....|+.. .....|+..++.+|.|++
T Consensus 103 ~~~D~v~~~~~~~~---~~~~~~~~~~p~i~~~~d~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~e~~~~~~ad~vi~ 178 (397)
T TIGR03087 103 EPVDAIVVFSSAMA---QYVTPHVRGVPRIVDFVDVDSDKWLQYARTKRWP-LRWIYRREGRLLLAYERAIAARFDAATF 178 (397)
T ss_pred CCCCEEEEeccccc---eeccccccCCCeEeehhhHHHHHHHHHHhccCcc-hhHHHHHHHHHHHHHHHHHHhhCCeEEE
Confidence 57999999875432 2222 34689999999986432211000 0000 00011110 111346778899999999
Q ss_pred CCHHHHhhccccccccccccccccccceeeeccCCCCCCcEEEecCCccCCCCCCCchHHHhhccCchhhHHhhcChhhh
Q 003962 457 STFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEEKRRLKSFHPEIEELLYSDVEN 536 (783)
Q Consensus 457 ~S~~~~~~~~~~v~qy~~~~~f~~p~l~~v~~gi~~~~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~~~~~l~~~~~~ 536 (783)
+|+.+.+.+++.. +.. ..++.+||||+|.+.|.|......
T Consensus 179 ~S~~~~~~l~~~~-------------------~~~--~~~v~vipngvd~~~f~~~~~~~~------------------- 218 (397)
T TIGR03087 179 VSRAEAELFRRLA-------------------PEA--AGRITAFPNGVDADFFSPDRDYPN------------------- 218 (397)
T ss_pred cCHHHHHHHHHhC-------------------CCC--CCCeEEeecccchhhcCCCccccC-------------------
Confidence 9998877433221 111 568999999999988866432110
Q ss_pred hhhhccccCCCCcEEEEEecccCCCCHHHHH----HHHHHhHccCCCeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHHc
Q 003962 537 KEHLCVLKDRNKPILFTMARLDRVKNLTGLV----EWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQY 612 (783)
Q Consensus 537 ~~~~gll~~~~k~iIl~vGRL~~~Kgl~~Li----eA~~~l~~~~~~~~LvIVG~g~~~~~~~~ee~~~~~~l~~li~~~ 612 (783)
.+ ..++++|+|+||+++.||++.++ +++..+.+..|+++|+|+|+|+. +. ++++
T Consensus 219 ----~~--~~~~~~ilf~G~l~~~k~~~~l~~~~~~~~~~l~~~~p~~~l~ivG~g~~------------~~----~~~l 276 (397)
T TIGR03087 219 ----PY--PPGKRVLVFTGAMDYWPNIDAVVWFAERVFPAVRARRPAAEFYIVGAKPS------------PA----VRAL 276 (397)
T ss_pred ----CC--CCCCcEEEEEEecCCccCHHHHHHHHHHHHHHHHHHCCCcEEEEECCCCh------------HH----HHHh
Confidence 01 34567899999999999999988 56666777779999999999964 12 2333
Q ss_pred CCCCcEEEccCCCCcCChHHHHHHHHccCcEEEeCCC-CCCCcHHHHHHHHcCCcEEEcCccccccccccCceEEEECCC
Q 003962 613 KLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPAL-YEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPY 691 (783)
Q Consensus 613 ~L~~~V~flG~~~~~~~~~el~~~ia~aadvfV~PS~-~E~fGltvlEAMa~GlPVVat~~GG~~EiI~dg~~G~li~p~ 691 (783)
+..++|.|+|. ++ ++..+++. +|++|+||. .||+|++++|||+||+|||+|+.|+ ..+...+++|++++ +
T Consensus 277 ~~~~~V~~~G~----v~--~~~~~~~~-adv~v~Ps~~~eG~~~~~lEAma~G~PVV~t~~~~-~~i~~~~~~g~lv~-~ 347 (397)
T TIGR03087 277 AALPGVTVTGS----VA--DVRPYLAH-AAVAVAPLRIARGIQNKVLEAMAMAKPVVASPEAA-EGIDALPGAELLVA-A 347 (397)
T ss_pred ccCCCeEEeee----cC--CHHHHHHh-CCEEEecccccCCcccHHHHHHHcCCCEEecCccc-ccccccCCcceEeC-C
Confidence 44578999994 33 47788885 999999997 6999999999999999999998764 33444456799886 8
Q ss_pred CHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Q 003962 692 HGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEEKYTWKIYSQRLLTLTG 743 (783)
Q Consensus 692 d~e~lAeaI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~~~a~~ll~ly~ 743 (783)
|++++|++|.+++ +|++.+++|+++|++++.++|||+.+++++.+++.
T Consensus 348 ~~~~la~ai~~ll----~~~~~~~~~~~~ar~~v~~~fsw~~~~~~~~~~l~ 395 (397)
T TIGR03087 348 DPADFAAAILALL----ANPAEREELGQAARRRVLQHYHWPRNLARLDALLE 395 (397)
T ss_pred CHHHHHHHHHHHH----cCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHhc
Confidence 9999999996665 89999999999999999999999999999999874
No 59
>TIGR02918 accessory Sec system glycosylation protein GtfA. Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus. Members are associated with glycosylation of serine-rich glycoproteins exported by the accessory Sec system.
Probab=100.00 E-value=1.2e-31 Score=308.58 Aligned_cols=280 Identities=21% Similarity=0.244 Sum_probs=212.0
Q ss_pred CCCceEEEEcCCCchHHHHHHHHhcCCcEEEEecCCCccCCCCCc--hhhhhccccccccchhhHhHHhhhcCCEEEcCC
Q 003962 381 QGKPDLIIGNYSDGNIVASLLAHKLGVTQCTIAHALEKTKYPDSD--IYWKNLDDKYHFSCQFTADLIAMNHTDFIITST 458 (783)
Q Consensus 381 ~~~pDIIh~h~~~~~lva~llar~lgvp~v~t~H~l~~~~~~~s~--~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt~S 458 (783)
..++||+|++.+.....+ ++....++|.++++|+-+........ ..|.. .|. ......+.+|.+|++|
T Consensus 209 ~~~~di~i~dr~~~~~~~-~~~~~~~~~~v~~lH~~h~~~~~~~~~~~~~~~---~y~------~~~~~~~~~D~iI~~S 278 (500)
T TIGR02918 209 LTKKDIIILDRSTGIGQA-VLENKGPAKLGVVVHAEHFSESATNETYILWNN---YYE------YQFSNADYIDFFITAT 278 (500)
T ss_pred CCCCCEEEEcCCcccchH-HHhcCCCceEEEEEChhhhcCccCcchhHHHHH---HHH------HHHhchhhCCEEEECC
Confidence 357999999776653333 44555689999999984422211111 11221 111 1123467889999999
Q ss_pred HHHHhhccccccccccccccccccceeeeccCCCCCCcEEEecCCccCCCCCCCchHHHhhccCchhhHHhhcChhhhhh
Q 003962 459 FQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEEKRRLKSFHPEIEELLYSDVENKE 538 (783)
Q Consensus 459 ~~~~~~~~~~v~qy~~~~~f~~p~l~~v~~gi~~~~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~~~~~l~~~~~~~~ 538 (783)
+...+.+.+..++|. .. .+++.+||||++...+.|..
T Consensus 279 ~~~~~~l~~~~~~~~----------------~~--~~ki~viP~g~~~~~~~~~~------------------------- 315 (500)
T TIGR02918 279 DIQNQILKNQFKKYY----------------NI--EPRIYTIPVGSLDELQYPEQ------------------------- 315 (500)
T ss_pred HHHHHHHHHHhhhhc----------------CC--CCcEEEEcCCCcccccCccc-------------------------
Confidence 887665444433331 11 56889999998755433210
Q ss_pred hhccccCCCCcEEEEEecccCCCCHHHHHHHHHHhHccCCCeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHHcCCCCcE
Q 003962 539 HLCVLKDRNKPILFTMARLDRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLNGQF 618 (783)
Q Consensus 539 ~~gll~~~~k~iIl~vGRL~~~Kgl~~LieA~~~l~~~~~~~~LvIVG~g~~~~~~~~ee~~~~~~l~~li~~~~L~~~V 618 (783)
..++..|+++||+.+.||++.|++|+.++.+..|+++|+|+|+|+. .+.++++++++++.++|
T Consensus 316 ------~r~~~~il~vGrl~~~Kg~~~li~A~~~l~~~~p~~~l~i~G~G~~-----------~~~l~~~i~~~~l~~~V 378 (500)
T TIGR02918 316 ------ERKPFSIITASRLAKEKHIDWLVKAVVKAKKSVPELTFDIYGEGGE-----------KQKLQKIINENQAQDYI 378 (500)
T ss_pred ------ccCCeEEEEEeccccccCHHHHHHHHHHHHhhCCCeEEEEEECchh-----------HHHHHHHHHHcCCCCeE
Confidence 2334579999999999999999999999998899999999999953 46788999999999999
Q ss_pred EEccCCCCcCChHHHHHHHHccCcEEEeCCCCCCCcHHHHHHHHcCCcEEEcCcc-ccccccccCceEEEECCC----C-
Q 003962 619 RWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKG-GPAEIIVNGKSGYHIDPY----H- 692 (783)
Q Consensus 619 ~flG~~~~~~~~~el~~~ia~aadvfV~PS~~E~fGltvlEAMa~GlPVVat~~G-G~~EiI~dg~~G~li~p~----d- 692 (783)
.|+| ..+..+ +++ .+|++|+||.+||||++++||||||+|||+|+.+ |++|+|.+|.+|++++++ |
T Consensus 379 ~f~G----~~~~~~---~~~-~adv~v~pS~~Egfgl~~lEAma~G~PVI~~dv~~G~~eiI~~g~nG~lv~~~~~~~d~ 450 (500)
T TIGR02918 379 HLKG----HRNLSE---VYK-DYELYLSASTSEGFGLTLMEAVGSGLGMIGFDVNYGNPTFIEDNKNGYLIPIDEEEDDE 450 (500)
T ss_pred EEcC----CCCHHH---HHH-hCCEEEEcCccccccHHHHHHHHhCCCEEEecCCCCCHHHccCCCCEEEEeCCccccch
Confidence 9999 444444 455 5999999999999999999999999999999986 899999999999999843 3
Q ss_pred ---HHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Q 003962 693 ---GEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEEKYTWKIYSQRLLTLTGV 744 (783)
Q Consensus 693 ---~e~lAeaI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~~~a~~ll~ly~~ 744 (783)
++++|++|.+++ + ++.+++|+++|++.+ ++|||+.++++|.++++.
T Consensus 451 ~~~~~~la~~I~~ll----~-~~~~~~~~~~a~~~a-~~fs~~~v~~~w~~ll~~ 499 (500)
T TIGR02918 451 DQIITALAEKIVEYF----N-SNDIDAFHEYSYQIA-EGFLTANIIEKWKKLVRE 499 (500)
T ss_pred hHHHHHHHHHHHHHh----C-hHHHHHHHHHHHHHH-HhcCHHHHHHHHHHHHhh
Confidence 777888886554 4 556999999999976 889999999999998753
No 60
>cd03811 GT1_WabH_like This family is most closely related to the GT1 family of glycosyltransferases. WabH in Klebsiella pneumoniae has been shown to transfer a GlcNAc residue from UDP-GlcNAc onto the acceptor GalUA residue in the cellular outer core.
Probab=100.00 E-value=4.4e-31 Score=282.83 Aligned_cols=272 Identities=21% Similarity=0.284 Sum_probs=212.0
Q ss_pred CCceEEEEcCC-CchHHHHHHHHhcCCcEEEEecCCCccCCCCCchhhhhccccccccchhhHhHHhhhcCCEEEcCCHH
Q 003962 382 GKPDLIIGNYS-DGNIVASLLAHKLGVTQCTIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTFQ 460 (783)
Q Consensus 382 ~~pDIIh~h~~-~~~lva~llar~lgvp~v~t~H~l~~~~~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~ 460 (783)
.+||+||++.. ...+.+.+.++. ++|.+++.|+............+ ......++.+|.+++.|..
T Consensus 80 ~~~dii~~~~~~~~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~d~ii~~s~~ 145 (353)
T cd03811 80 EKPDVVISHLTTTPNVLALLAARL-GTKLIVWEHNSLSLELKRKLRLL-------------LLIRKLYRRADKIVAVSEG 145 (353)
T ss_pred cCCCEEEEcCccchhHHHHHHhhc-CCceEEEEcCcchhhhccchhHH-------------HHHHhhccccceEEEeccc
Confidence 37999999988 444555544444 89999999986543211110000 2345678999999999987
Q ss_pred HHhhccccccccccccccccccceeeeccCCCCCCcEEEecCCccCCCCCCCchHHHhhccCchhhHHhhcChhhhhhhh
Q 003962 461 EIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEEKRRLKSFHPEIEELLYSDVENKEHL 540 (783)
Q Consensus 461 ~~~~~~~~v~qy~~~~~f~~p~l~~v~~gi~~~~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~~~~~l~~~~~~~~~~ 540 (783)
..+.+.+.. +. ...++.+||||+|.+.+.+...... ..
T Consensus 146 ~~~~~~~~~-------------------~~--~~~~~~vi~~~~~~~~~~~~~~~~~---------------------~~ 183 (353)
T cd03811 146 VKEDLLKLL-------------------GI--PPDKIEVIYNPIDIEEIRALAEEPL---------------------EL 183 (353)
T ss_pred hhhhHHHhh-------------------cC--CccccEEecCCcChhhcCcccchhh---------------------hc
Confidence 665332221 11 1468999999999887765433211 01
Q ss_pred ccccCCCCcEEEEEecccCCCCHHHHHHHHHHhHccCCCeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHHcCCCCcEEE
Q 003962 541 CVLKDRNKPILFTMARLDRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLNGQFRW 620 (783)
Q Consensus 541 gll~~~~k~iIl~vGRL~~~Kgl~~LieA~~~l~~~~~~~~LvIVG~g~~~~~~~~ee~~~~~~l~~li~~~~L~~~V~f 620 (783)
+. +.++++++++||+.+.||++.+++++.++.+..++++|+++|+++. ..++.+.++++++.++|.|
T Consensus 184 ~~--~~~~~~i~~~g~~~~~k~~~~~i~~~~~l~~~~~~~~l~i~G~~~~-----------~~~~~~~~~~~~~~~~v~~ 250 (353)
T cd03811 184 GI--PPDGPVILAVGRLSPQKGFDTLIRAFALLRKEGPDARLVILGDGPL-----------REELEALAKELGLADRVHF 250 (353)
T ss_pred CC--CCCceEEEEEecchhhcChHHHHHHHHHhhhcCCCceEEEEcCCcc-----------HHHHHHHHHhcCCCccEEE
Confidence 22 4667899999999999999999999999988888999999999864 3566688899999999999
Q ss_pred ccCCCCcCChHHHHHHHHccCcEEEeCCCCCCCcHHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHHHHHHHH
Q 003962 621 ISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEIL 700 (783)
Q Consensus 621 lG~~~~~~~~~el~~~ia~aadvfV~PS~~E~fGltvlEAMa~GlPVVat~~GG~~EiI~dg~~G~li~p~d~e~lAeaI 700 (783)
.|.. +++..+++. +|++|+||.+|++|++++|||+||+|||+|+.||..|++.++.+|+++++.|.+++++.+
T Consensus 251 ~g~~------~~~~~~~~~-~d~~i~ps~~e~~~~~~~Ea~~~G~PvI~~~~~~~~e~i~~~~~g~~~~~~~~~~~~~~~ 323 (353)
T cd03811 251 LGFQ------SNPYPYLKA-ADLFVLSSRYEGFPNVLLEAMALGTPVVATDCPGPREILEDGENGLLVPVGDEAALAAAA 323 (353)
T ss_pred eccc------CCHHHHHHh-CCEEEeCcccCCCCcHHHHHHHhCCCEEEcCCCChHHHhcCCCceEEECCCCHHHHHHHH
Confidence 9943 346777885 999999999999999999999999999999999999999999999999999999996444
Q ss_pred HHHHHHhhCCHHHHHHHHHHHHHHHHHhCC
Q 003962 701 VDFFEKCKADPSYWDKISLGGLKRIEEKYT 730 (783)
Q Consensus 701 ~~~l~~l~~dp~~~~~ms~~a~~~v~~~ys 730 (783)
..+ ..+..+++.++++++++++.+.++|+
T Consensus 324 ~~i-~~~~~~~~~~~~~~~~~~~~~~~~~~ 352 (353)
T cd03811 324 LAL-LDLLLDPELRERLAAAARERVAREYS 352 (353)
T ss_pred HHH-HhccCChHHHHHHHHHHHHHHHHHhc
Confidence 433 56779999999999999999888886
No 61
>cd04946 GT1_AmsK_like This family is most closely related to the GT1 family of glycosyltransferases. AmsK is involved in the biosynthesis of amylovoran, which functions as a virulence factor. It functions as a glycosyl transferase which transfers galactose from UDP-galactose to a lipid-linked amylovoran-subunit precursor. The members of this family are found mainly in bacteria and Archaea.
Probab=99.98 E-value=1.1e-30 Score=294.62 Aligned_cols=276 Identities=16% Similarity=0.216 Sum_probs=218.9
Q ss_pred CCCceEEEEcCCCc-hHHHHHHHHhcCCc-EEEEecCCCccCCCCCchhhhhccccccccchhhHhHHhhhcCCEEEcCC
Q 003962 381 QGKPDLIIGNYSDG-NIVASLLAHKLGVT-QCTIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITST 458 (783)
Q Consensus 381 ~~~pDIIh~h~~~~-~lva~llar~lgvp-~v~t~H~l~~~~~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt~S 458 (783)
..++|++|++.... +..+.+++++.+.+ +|.++|+..... ......+. ......++.+|.|+++|
T Consensus 125 ~~~~~v~~sy~~~~~~~~~~~l~~~~~~~~~i~~~Hg~d~~~--------~~~~~~~~-----~~~~~~~~~~d~ii~~S 191 (407)
T cd04946 125 DGQGTVFYSYWLHETAYALALLKKEYLRKRVISRAHGYDLYE--------DRYPSGYI-----PLRRYLLSSLDAVFPCS 191 (407)
T ss_pred ccCceEEEEecCchHHHHHHHHHHhcCCceEEEEeccchhhh--------hhccccch-----HHHHHHHhcCCEEEECC
Confidence 35788999865544 44555677777776 899999853211 11111111 12234578999999999
Q ss_pred HHHHhhccccccccccccccccccceeeeccCCCCCCcEEEecCCccCCCCCCCchHHHhhccCchhhHHhhcChhhhhh
Q 003962 459 FQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEEKRRLKSFHPEIEELLYSDVENKE 538 (783)
Q Consensus 459 ~~~~~~~~~~v~qy~~~~~f~~p~l~~v~~gi~~~~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~~~~~l~~~~~~~~ 538 (783)
....+.+++.. +....++.+++||+|...+.+..
T Consensus 192 ~~~~~~l~~~~---------------------~~~~~ki~vi~~gv~~~~~~~~~------------------------- 225 (407)
T cd04946 192 EQGRNYLQKRY---------------------PAYKEKIKVSYLGVSDPGIISKP------------------------- 225 (407)
T ss_pred HHHHHHHHHHC---------------------CCccccEEEEECCcccccccCCC-------------------------
Confidence 98877444332 11266889999999987554321
Q ss_pred hhccccCCCCcEEEEEecccCCCCHHHHHHHHHHhHccCC--CeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHHcCCCC
Q 003962 539 HLCVLKDRNKPILFTMARLDRVKNLTGLVEWYGKNAKLRE--LVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLNG 616 (783)
Q Consensus 539 ~~gll~~~~k~iIl~vGRL~~~Kgl~~LieA~~~l~~~~~--~~~LvIVG~g~~~~~~~~ee~~~~~~l~~li~~~~L~~ 616 (783)
...+++.|+++||+.+.||++.+++|+.++.+.+| ++.++++|+|+. .+.+++++++.+..+
T Consensus 226 -----~~~~~~~il~~Grl~~~Kg~~~li~a~~~l~~~~p~~~l~~~iiG~g~~-----------~~~l~~~~~~~~~~~ 289 (407)
T cd04946 226 -----SKDDTLRIVSCSYLVPVKRVDLIIKALAALAKARPSIKIKWTHIGGGPL-----------EDTLKELAESKPENI 289 (407)
T ss_pred -----CCCCCEEEEEeeccccccCHHHHHHHHHHHHHhCCCceEEEEEEeCchH-----------HHHHHHHHHhcCCCc
Confidence 03456789999999999999999999999988776 466788999854 356778888888888
Q ss_pred cEEEccCCCCcCChHHHHHHHHc-cCcEEEeCCCCCCCcHHHHHHHHcCCcEEEcCccccccccccCceEEEECCC-CHH
Q 003962 617 QFRWISSQMNRVRNGELYRYICD-TKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPY-HGE 694 (783)
Q Consensus 617 ~V~flG~~~~~~~~~el~~~ia~-aadvfV~PS~~E~fGltvlEAMa~GlPVVat~~GG~~EiI~dg~~G~li~p~-d~e 694 (783)
+|.|+| .++.+++.++++. .+|++|.||.+||+|++++|||+||+|||+|+.||..|+|.++++|++++++ |++
T Consensus 290 ~V~f~G----~v~~~e~~~~~~~~~~~v~v~~S~~Eg~p~~llEAma~G~PVIas~vgg~~e~i~~~~~G~l~~~~~~~~ 365 (407)
T cd04946 290 SVNFTG----ELSNSEVYKLYKENPVDVFVNLSESEGLPVSIMEAMSFGIPVIATNVGGTPEIVDNGGNGLLLSKDPTPN 365 (407)
T ss_pred eEEEec----CCChHHHHHHHhhcCCCEEEeCCccccccHHHHHHHHcCCCEEeCCCCCcHHHhcCCCcEEEeCCCCCHH
Confidence 999999 7778999999974 3789999999999999999999999999999999999999999999999875 899
Q ss_pred HHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHH
Q 003962 695 QAAEILVDFFEKCKADPSYWDKISLGGLKRIEEKYTWKIYSQRLL 739 (783)
Q Consensus 695 ~lAeaI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~~~a~~ll 739 (783)
+++++|.+++ +||+.+++|+++|++.+.++|||+...+++.
T Consensus 366 ~la~~I~~ll----~~~~~~~~m~~~ar~~~~~~f~~~~~~~~~~ 406 (407)
T cd04946 366 ELVSSLSKFI----DNEEEYQTMREKAREKWEENFNASKNYREFA 406 (407)
T ss_pred HHHHHHHHHH----hCHHHHHHHHHHHHHHHHHHcCHHHhHHHhc
Confidence 9999997665 7999999999999999999999999988875
No 62
>COG0297 GlgA Glycogen synthase [Carbohydrate transport and metabolism]
Probab=99.97 E-value=1.6e-29 Score=285.43 Aligned_cols=438 Identities=17% Similarity=0.192 Sum_probs=297.6
Q ss_pred ceEEEEcccccccccCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHHCCCceeeceeEEeCCCCCCCCCcccceeeeecC
Q 003962 255 FNVVILTPHGYFAQDDVLGYPDTGGQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRLLPDAVGTTCGQRLEKVYG 334 (783)
Q Consensus 255 ~rI~iis~h~~~~~~~~lg~p~tGG~~vyv~d~araL~~eLa~~L~~~GheV~~~i~VvT~~~~~~~g~~~~~~~e~i~~ 334 (783)
|||+.++....| --++||....+. .|.+.|++.|++|+ |+.+.++. ....+....+.+..
T Consensus 1 M~Il~v~~E~~p-------~vK~GGLaDv~~--------alpk~L~~~g~~v~----v~lP~y~~-~~~~~~~~~~~~~~ 60 (487)
T COG0297 1 MKILFVASEIFP-------FVKTGGLADVVG--------ALPKALAKRGVDVR----VLLPSYPK-VQKEWRDLLKVVGK 60 (487)
T ss_pred CcceeeeeeecC-------ccccCcHHHHHH--------HhHHHHHhcCCeEE----EEcCCchh-hhhhhccccceeeE
Confidence 788888877664 257999999888 56667899999999 88877763 22222221111110
Q ss_pred c-------cCeEEEEeccCC--Ccc-ccc--cccccc--cchhh---HHHHH--HHHHHHHHHHcC--CCceEEEEcCCC
Q 003962 335 T-------KYSDILRVPFRT--EKG-VVR--KWISRF--EVWPY---LETYT--EDVAVEIAKELQ--GKPDLIIGNYSD 393 (783)
Q Consensus 335 ~-------~~v~Ilrvp~~~--~~~-~~~--~~isr~--~i~~~---l~~f~--~~~~~~l~~~l~--~~pDIIh~h~~~ 393 (783)
. ....+....... ..- ++. ....|. ..+.+ .++|+ ..+..++..... ..|||||+|+|.
T Consensus 61 ~~~~~~~~~~~~~~~~~~~~~~v~~~lid~~~~f~r~~~~~~~~~d~~~Rf~~F~~a~~~~~~~~~~~~~pDIvH~hDWq 140 (487)
T COG0297 61 FGVLKGGRAQLFIVKEYGKDGGVDLYLIDNPALFKRPDSTLYGYYDNAERFAFFSLAAAELAPLGLISWLPDIVHAHDWQ 140 (487)
T ss_pred eeeeecccceEEEEEeecccCCCcEEEecChhhcCccccccCCCCcHHHHHHHHHHHHHHHhhhcCCCCCCCEEEeecHH
Confidence 0 001111111100 000 111 111110 11111 12222 223333333322 379999999999
Q ss_pred chHHHHHHHHh----cCCcEEEEecCCCccCCCC-Cchhhhhcc-cccc-----ccchhhHhHHhhhcCCEEEcCCHHHH
Q 003962 394 GNIVASLLAHK----LGVTQCTIAHALEKTKYPD-SDIYWKNLD-DKYH-----FSCQFTADLIAMNHTDFIITSTFQEI 462 (783)
Q Consensus 394 ~~lva~llar~----lgvp~v~t~H~l~~~~~~~-s~~~~~~~~-~~y~-----f~~~~~~e~~a~~~AD~IIt~S~~~~ 462 (783)
.++++.+++.. ..+|.|+|+|++....... .-..+-.+. ..|+ +-.+....+..+..||.|.|+|+..+
T Consensus 141 t~L~~~~lk~~~~~~~~i~tVfTIHNl~~qG~~~~~~~~~lgLp~~~~~~~~l~~~~~~~~lK~gi~~ad~vttVSptYa 220 (487)
T COG0297 141 TGLLPAYLKQRYRSGYIIPTVFTIHNLAYQGLFRLQYLEELGLPFEAYASFGLEFYGQISFLKGGLYYADAVTTVSPTYA 220 (487)
T ss_pred HHHHHHHHhhcccccccCCeEEEEeeceeecccchhhHHHhcCCHHHhhhceeeecCcchhhhhhheeccEEEEECHHHH
Confidence 99999999984 4799999999976554332 111111111 0111 11223345667889999999999888
Q ss_pred hhccccccccccccccccccceeeeccCCCCCCcEEEecCCccCCCCCCCchHHHhhccCchhhHHhhcChhhhhhhhcc
Q 003962 463 AGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEEKRRLKSFHPEIEELLYSDVENKEHLCV 542 (783)
Q Consensus 463 ~~~~~~v~qy~~~~~f~~p~l~~v~~gi~~~~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~~~~~l~~~~~~~~~~gl 542 (783)
..+... .|.. .+.++. .....++.-|-||+|.+.+.|.++.......-.+.+..+..|...+.+++|+
T Consensus 221 ~Ei~t~--~~g~----gl~g~l------~~~~~~l~GI~NgiD~~~wnp~~d~~~~~~y~~~~~~~k~~nk~~L~~~~gL 288 (487)
T COG0297 221 GEIYTP--EYGE----GLEGLL------SWRSGKLSGILNGIDYDLWNPETDPYIAANYSAEVLPAKAENKVALQERLGL 288 (487)
T ss_pred Hhhccc--cccc----cchhhh------hhccccEEEEEeeEEecccCcccccchhccCCccchhhhHHHHHHHHHHhCC
Confidence 754411 1210 011111 1113578899999999999998765432222223333477788889999999
Q ss_pred ccCCCCcEEEEEecccCCCCHHHHHHHHHHhHccCCCeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHHcCCCCcEEEcc
Q 003962 543 LKDRNKPILFTMARLDRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLNGQFRWIS 622 (783)
Q Consensus 543 l~~~~k~iIl~vGRL~~~Kgl~~LieA~~~l~~~~~~~~LvIVG~g~~~~~~~~ee~~~~~~l~~li~~~~L~~~V~flG 622 (783)
..+.+.|++.++||++.+||++.+++++..+.+.. +++|+.|.|.. .....+..+++.+.. ++...-
T Consensus 289 ~~~~~~pl~~~vsRl~~QKG~dl~~~~i~~~l~~~--~~~vilG~gd~---------~le~~~~~la~~~~~--~~~~~i 355 (487)
T COG0297 289 DVDLPGPLFGFVSRLTAQKGLDLLLEAIDELLEQG--WQLVLLGTGDP---------ELEEALRALASRHPG--RVLVVI 355 (487)
T ss_pred CCCCCCcEEEEeeccccccchhHHHHHHHHHHHhC--ceEEEEecCcH---------HHHHHHHHHHHhcCc--eEEEEe
Confidence 76778899999999999999999999999998864 99999999932 456778888888764 454443
Q ss_pred CCCCcCChHHHHHHHHccCcEEEeCCCCCCCcHHHHHHHHcCCcEEEcCcccccccccc--------CceEEEECCCCHH
Q 003962 623 SQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVN--------GKSGYHIDPYHGE 694 (783)
Q Consensus 623 ~~~~~~~~~el~~~ia~aadvfV~PS~~E~fGltvlEAMa~GlPVVat~~GG~~EiI~d--------g~~G~li~p~d~e 694 (783)
.. ++.+++.+...+|++++||++|+||++-++||..|++.|++.+||.+|.|.+ ..+||++.+.|++
T Consensus 356 ----~~-~~~la~~i~agaD~~lmPSrfEPcGL~ql~amryGtvpIv~~tGGLadTV~~~~~~~~~~~gtGf~f~~~~~~ 430 (487)
T COG0297 356 ----GY-DEPLAHLIYAGADVILMPSRFEPCGLTQLYAMRYGTLPIVRETGGLADTVVDRNEWLIQGVGTGFLFLQTNPD 430 (487)
T ss_pred ----ee-cHHHHHHHHhcCCEEEeCCcCcCCcHHHHHHHHcCCcceEcccCCccceecCccchhccCceeEEEEecCCHH
Confidence 22 3456666655799999999999999999999999999999999999999975 4699999999999
Q ss_pred HHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHh
Q 003962 695 QAAEILVDFFEKCKADPSYWDKISLGGLKRIEEKYTWKIYSQRLLTLTGVY 745 (783)
Q Consensus 695 ~lAeaI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~~~a~~ll~ly~~~ 745 (783)
+++.+|.+++.-...++..|+.+..++.. ..|+|+..+++|.++|+..
T Consensus 431 ~l~~al~rA~~~y~~~~~~w~~~~~~~m~---~d~sw~~sa~~y~~lY~~~ 478 (487)
T COG0297 431 HLANALRRALVLYRAPPLLWRKVQPNAMG---ADFSWDLSAKEYVELYKPL 478 (487)
T ss_pred HHHHHHHHHHHHhhCCHHHHHHHHHhhcc---cccCchhHHHHHHHHHHHH
Confidence 99999999986555566669999998887 6899999999999999875
No 63
>PLN02275 transferase, transferring glycosyl groups
Probab=99.97 E-value=2.9e-29 Score=279.49 Aligned_cols=318 Identities=12% Similarity=0.072 Sum_probs=212.0
Q ss_pred HHHHHHHHCCC-ceeeceeEEeCCCCCCCCCcccceeeeecCccCeEEEEeccCCCccccccccccccchh---hHHHH-
Q 003962 294 EMLLRIKQQGL-DITPQILIITRLLPDAVGTTCGQRLEKVYGTKYSDILRVPFRTEKGVVRKWISRFEVWP---YLETY- 368 (783)
Q Consensus 294 eLa~~L~~~Gh-eV~~~i~VvT~~~~~~~g~~~~~~~e~i~~~~~v~Ilrvp~~~~~~~~~~~isr~~i~~---~l~~f- 368 (783)
+++.+|+++|+ +|+ |+|...+ +. ........+++++++|. +... .. +. ..+. |+...
T Consensus 23 ~~~~~l~~~~~~~v~----vi~~~~~---~~-----~~~~~~~~~v~v~r~~~-~~~~--~~-~~--~~~~~~~~~~~~~ 84 (371)
T PLN02275 23 YHALSLARQASFQVD----VVAYGGS---EP-----IPALLNHPSIHIHLMVQ-PRLL--QR-LP--RVLYALALLLKVA 84 (371)
T ss_pred HHHHHHHhcCCceEE----EEEecCC---CC-----CHHHhcCCcEEEEECCC-cccc--cc-cc--cchHHHHHHHHHH
Confidence 35556788876 799 8875321 11 11112234689999986 3211 00 11 1222 22211
Q ss_pred --HHHHHHHHHHHcCCCceEEEEcCCCc---hHHHHHHHHhcCCcEEEEecCCCccCCCCCchhhhhccccccccchhhH
Q 003962 369 --TEDVAVEIAKELQGKPDLIIGNYSDG---NIVASLLAHKLGVTQCTIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTA 443 (783)
Q Consensus 369 --~~~~~~~l~~~l~~~pDIIh~h~~~~---~lva~llar~lgvp~v~t~H~l~~~~~~~s~~~~~~~~~~y~f~~~~~~ 443 (783)
.......+.. ...+||+||+|.+.. ...+.++++..++|++++.|+++...... .. ........+ ....
T Consensus 85 ~~~~~~~~~~~~-~~~~~DvV~~~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~~~~-~~--~~~~~~~~~--~~~~ 158 (371)
T PLN02275 85 IQFLMLLWFLCV-KIPRPDVFLVQNPPSVPTLAVVKLACWLRRAKFVIDWHNFGYTLLAL-SL--GRSHPLVRL--YRWY 158 (371)
T ss_pred HHHHHHHHHHHh-hCCCCCEEEEeCCCCcHHHHHHHHHHHHhCCCEEEEcCCccHHHHhc-cc--CCCCHHHHH--HHHH
Confidence 1111111111 146899999987553 45667778888999999999864211000 00 000000111 1123
Q ss_pred hHHhhhcCCEEEcCCHHHHhhccccccccccccccccccceeeeccCCCCCCcEEEecCCccCCCCCCCchHHHhhccCc
Q 003962 444 DLIAMNHTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEEKRRLKSFH 523 (783)
Q Consensus 444 e~~a~~~AD~IIt~S~~~~~~~~~~v~qy~~~~~f~~p~l~~v~~gi~~~~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~ 523 (783)
++..++.+|.||++|+...+.+.+. .|+ ++.+|+||. .+.|.|......
T Consensus 159 e~~~~~~ad~ii~~S~~~~~~l~~~-------------------~g~-----~i~vi~n~~-~~~f~~~~~~~~------ 207 (371)
T PLN02275 159 ERHYGKMADGHLCVTKAMQHELDQN-------------------WGI-----RATVLYDQP-PEFFRPASLEIR------ 207 (371)
T ss_pred HHHHHhhCCEEEECCHHHHHHHHHh-------------------cCC-----CeEEECCCC-HHHcCcCCchhc------
Confidence 6678899999999999877633221 122 278999985 455655432110
Q ss_pred hhhHHhhcChhhhhhhhccccCCCCcEEEEEecccCCCCHHHHHHHHHHhH-----------------ccCCCeEEEEEe
Q 003962 524 PEIEELLYSDVENKEHLCVLKDRNKPILFTMARLDRVKNLTGLVEWYGKNA-----------------KLRELVNLVVVG 586 (783)
Q Consensus 524 ~~~~~~l~~~~~~~~~~gll~~~~k~iIl~vGRL~~~Kgl~~LieA~~~l~-----------------~~~~~~~LvIVG 586 (783)
. ..+.+.+++++||+.+.||++.+++|+..+. +..|+++|+|+|
T Consensus 208 ------------------~-~~~~~~~i~~~grl~~~k~~~~li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~i~l~ivG 268 (371)
T PLN02275 208 ------------------L-RPNRPALVVSSTSWTPDEDFGILLEAAVMYDRRVAARLNESDSASGKQSLYPRLLFIITG 268 (371)
T ss_pred ------------------c-cCCCcEEEEEeCceeccCCHHHHHHHHHHHHhhhhhccccccccccccccCCCeEEEEEe
Confidence 0 0223457889999999999999999998874 235789999999
Q ss_pred CCCCCCCccHHHHHHHHHHHHHHHHcCCCCcEEEccCCCCcCChHHHHHHHHccCcEEEeCCC---CCCCcHHHHHHHHc
Q 003962 587 GDRRKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPAL---YEAFGLTVVEAMTC 663 (783)
Q Consensus 587 ~g~~~~~~~~ee~~~~~~l~~li~~~~L~~~V~flG~~~~~~~~~el~~~ia~aadvfV~PS~---~E~fGltvlEAMa~ 663 (783)
+|+. .+++++.++++++++ +.|.+. .++.+++..+|+. +|++|.|+. .|+||++++|||||
T Consensus 269 ~G~~-----------~~~l~~~~~~~~l~~-v~~~~~---~~~~~~~~~~l~~-aDv~v~~~~s~~~e~~p~~llEAmA~ 332 (371)
T PLN02275 269 KGPQ-----------KAMYEEKISRLNLRH-VAFRTM---WLEAEDYPLLLGS-ADLGVSLHTSSSGLDLPMKVVDMFGC 332 (371)
T ss_pred CCCC-----------HHHHHHHHHHcCCCc-eEEEcC---CCCHHHHHHHHHh-CCEEEEeccccccccccHHHHHHHHC
Confidence 9975 368889999999976 887651 4677899999995 999998632 48999999999999
Q ss_pred CCcEEEcCccccccccccCceEEEECCCCHHHHHHHHHHH
Q 003962 664 GLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDF 703 (783)
Q Consensus 664 GlPVVat~~GG~~EiI~dg~~G~li~p~d~e~lAeaI~~~ 703 (783)
|+|||+|+.||.+|+|++|.+|++++ |++++|++|.++
T Consensus 333 G~PVVa~~~gg~~eiv~~g~~G~lv~--~~~~la~~i~~l 370 (371)
T PLN02275 333 GLPVCAVSYSCIGELVKDGKNGLLFS--SSSELADQLLEL 370 (371)
T ss_pred CCCEEEecCCChHHHccCCCCeEEEC--CHHHHHHHHHHh
Confidence 99999999999999999999999997 699999999654
No 64
>cd04949 GT1_gtfA_like This family is most closely related to the GT1 family of glycosyltransferases and is named after gtfA in Streptococcus gordonii, where it plays a role in the O-linked glycosylation of GspB, a cell surface glycoprotein involved in platelet binding. In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltra
Probab=99.97 E-value=2.3e-29 Score=278.77 Aligned_cols=273 Identities=22% Similarity=0.285 Sum_probs=212.1
Q ss_pred CCceEEEEcCCCchHHHHHHHHhcCCcEEEEecCCCccCCCCC-chhhhhccccccccchhhHhHHhhhcCCEEEcCCHH
Q 003962 382 GKPDLIIGNYSDGNIVASLLAHKLGVTQCTIAHALEKTKYPDS-DIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTFQ 460 (783)
Q Consensus 382 ~~pDIIh~h~~~~~lva~llar~lgvp~v~t~H~l~~~~~~~s-~~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~ 460 (783)
.++|+||++....... .++......+.+.++|+......... ...|+.. +. .....++.+|.||++|+.
T Consensus 98 ~~~diii~~~~~~~~~-~~~~~~~~~~~i~~~h~~~~~~~~~~~~~~~~~~---~~------~~~~~~~~~d~ii~~s~~ 167 (372)
T cd04949 98 TKPDVFILDRPTLDGQ-ALLNMKKAAKVVVVLHSNHVSDNNDPVHSLINNF---YE------YVFENLDKVDGVIVATEQ 167 (372)
T ss_pred CCCCEEEECCccccch-hHHhccCCceEEEEEChHHhCCcccccccccchh---hH------HHHhChhhCCEEEEccHH
Confidence 5899999987765333 23344445677899997543221111 0111111 11 112346789999999988
Q ss_pred HHhhccccccccccccccccccceeeeccCCCCCCcEEEecCCccCCCCCCCchHHHhhccCchhhHHhhcChhhhhhhh
Q 003962 461 EIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEEKRRLKSFHPEIEELLYSDVENKEHL 540 (783)
Q Consensus 461 ~~~~~~~~v~qy~~~~~f~~p~l~~v~~gi~~~~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~~~~~l~~~~~~~~~~ 540 (783)
.++.+.+..+ . ..++.+||||++...+.+....
T Consensus 168 ~~~~l~~~~~-------------------~---~~~v~~ip~g~~~~~~~~~~~~------------------------- 200 (372)
T cd04949 168 QKQDLQKQFG-------------------N---YNPIYTIPVGSIDPLKLPAQFK------------------------- 200 (372)
T ss_pred HHHHHHHHhC-------------------C---CCceEEEcccccChhhcccchh-------------------------
Confidence 7764433321 0 2348899999998766553200
Q ss_pred ccccCCCCcEEEEEecccCCCCHHHHHHHHHHhHccCCCeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHHcCCCCcEEE
Q 003962 541 CVLKDRNKPILFTMARLDRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLNGQFRW 620 (783)
Q Consensus 541 gll~~~~k~iIl~vGRL~~~Kgl~~LieA~~~l~~~~~~~~LvIVG~g~~~~~~~~ee~~~~~~l~~li~~~~L~~~V~f 620 (783)
...+..++++||+.+.||++.+++++.++.+..|+++|+|+|.|+. ...+..+++++++.++|.|
T Consensus 201 ----~~~~~~i~~vgrl~~~K~~~~li~a~~~l~~~~~~~~l~i~G~g~~-----------~~~~~~~~~~~~~~~~v~~ 265 (372)
T cd04949 201 ----QRKPHKIITVARLAPEKQLDQLIKAFAKVVKQVPDATLDIYGYGDE-----------EEKLKELIEELGLEDYVFL 265 (372)
T ss_pred ----hcCCCeEEEEEccCcccCHHHHHHHHHHHHHhCCCcEEEEEEeCch-----------HHHHHHHHHHcCCcceEEE
Confidence 3455689999999999999999999999998899999999999964 2456777788899999999
Q ss_pred ccCCCCcCChHHHHHHHHccCcEEEeCCCCCCCcHHHHHHHHcCCcEEEcCcc-ccccccccCceEEEECCCCHHHHHHH
Q 003962 621 ISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKG-GPAEIIVNGKSGYHIDPYHGEQAAEI 699 (783)
Q Consensus 621 lG~~~~~~~~~el~~~ia~aadvfV~PS~~E~fGltvlEAMa~GlPVVat~~G-G~~EiI~dg~~G~li~p~d~e~lAea 699 (783)
.|.. +++.++++. +|++|.||.+|+||++++|||+||+|||+++.+ |+.++|.++.+|++++++|++++|++
T Consensus 266 ~g~~------~~~~~~~~~-ad~~v~~S~~Eg~~~~~lEAma~G~PvI~~~~~~g~~~~v~~~~~G~lv~~~d~~~la~~ 338 (372)
T cd04949 266 KGYT------RDLDEVYQK-AQLSLLTSQSEGFGLSLMEALSHGLPVISYDVNYGPSEIIEDGENGYLVPKGDIEALAEA 338 (372)
T ss_pred cCCC------CCHHHHHhh-hhEEEecccccccChHHHHHHhCCCCEEEecCCCCcHHHcccCCCceEeCCCcHHHHHHH
Confidence 9943 357778885 999999999999999999999999999999987 89999999999999999999999999
Q ss_pred HHHHHHHhhCCHHHHHHHHHHHHHHHHHhCCHHHHHHHH
Q 003962 700 LVDFFEKCKADPSYWDKISLGGLKRIEEKYTWKIYSQRL 738 (783)
Q Consensus 700 I~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~~~a~~l 738 (783)
|..++ .|++.+++|++++++.+ ++|||+.++++|
T Consensus 339 i~~ll----~~~~~~~~~~~~a~~~~-~~~s~~~~~~~w 372 (372)
T cd04949 339 IIELL----NDPKLLQKFSEAAYENA-ERYSEENVWEKW 372 (372)
T ss_pred HHHHH----cCHHHHHHHHHHHHHHH-HHhhHHHHHhcC
Confidence 97666 89999999999999995 899999998874
No 65
>cd03804 GT1_wbaZ_like This family is most closely related to the GT1 family of glycosyltransferases. wbaZ in Salmonella enterica has been shown to possess the mannosyl transferase activity. The members of this family are found in certain bacteria and Archaea.
Probab=99.97 E-value=1.6e-29 Score=278.00 Aligned_cols=263 Identities=20% Similarity=0.266 Sum_probs=190.6
Q ss_pred CCceEEEEcCCCchHHHHHHHHhcCCcEEEEecCCCccCCCCCchh------hhhccccccccchhhHhHHhhhcCCEEE
Q 003962 382 GKPDLIIGNYSDGNIVASLLAHKLGVTQCTIAHALEKTKYPDSDIY------WKNLDDKYHFSCQFTADLIAMNHTDFII 455 (783)
Q Consensus 382 ~~pDIIh~h~~~~~lva~llar~lgvp~v~t~H~l~~~~~~~s~~~------~~~~~~~y~f~~~~~~e~~a~~~AD~II 455 (783)
.++|+||++.... +..+.+..++|.+..+|+.....+...+.+ +......+........+...++++|.++
T Consensus 82 ~~~D~v~~~~~~~---~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii 158 (351)
T cd03804 82 SGYDLVISSSHAV---AKGVITRPDQLHICYCHTPMRYAWDLYHDYLKESGLGKRLALRLLLHYLRIWDRRSAARVDYFI 158 (351)
T ss_pred cCCCEEEEcCcHH---hccccCCCCCcEEEEeCCchHHHhcCchHhhhhcccchhhHHHHHHHHHHHHHHHHhcCCCEEE
Confidence 5799999875422 222224567898989887321111100000 0000000000111123456689999999
Q ss_pred cCCHHHHhhccccccccccccccccccceeeeccCCCCCCcEEEecCCccCCCCCCCchHHHhhccCchhhHHhhcChhh
Q 003962 456 TSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEEKRRLKSFHPEIEELLYSDVE 535 (783)
Q Consensus 456 t~S~~~~~~~~~~v~qy~~~~~f~~p~l~~v~~gi~~~~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~~~~~l~~~~~ 535 (783)
++|+..++.+.+. +..+..+|+||+|.+.|.+..
T Consensus 159 ~~S~~~~~~~~~~------------------------~~~~~~vi~~~~d~~~~~~~~---------------------- 192 (351)
T cd03804 159 ANSRFVARRIKKY------------------------YGRDATVIYPPVDTDRFTPAE---------------------- 192 (351)
T ss_pred ECCHHHHHHHHHH------------------------hCCCcEEECCCCCHhhcCcCC----------------------
Confidence 9999887743322 133567999999987665421
Q ss_pred hhhhhccccCCCCcEEEEEecccCCCCHHHHHHHHHHhHccCCCeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHHcCCC
Q 003962 536 NKEHLCVLKDRNKPILFTMARLDRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLN 615 (783)
Q Consensus 536 ~~~~~gll~~~~k~iIl~vGRL~~~Kgl~~LieA~~~l~~~~~~~~LvIVG~g~~~~~~~~ee~~~~~~l~~li~~~~L~ 615 (783)
..++.++++||+.+.||++.+++|+.+++ ++|+|+|+|+. .+.+++ +..
T Consensus 193 ----------~~~~~il~~G~~~~~K~~~~li~a~~~~~-----~~l~ivG~g~~-----------~~~l~~-----~~~ 241 (351)
T cd03804 193 ----------EKEDYYLSVGRLVPYKRIDLAIEAFNKLG-----KRLVVIGDGPE-----------LDRLRA-----KAG 241 (351)
T ss_pred ----------CCCCEEEEEEcCccccChHHHHHHHHHCC-----CcEEEEECChh-----------HHHHHh-----hcC
Confidence 23457899999999999999999998763 78999999954 122222 456
Q ss_pred CcEEEccCCCCcCChHHHHHHHHccCcEEEeCCCCCCCcHHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHHH
Q 003962 616 GQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQ 695 (783)
Q Consensus 616 ~~V~flG~~~~~~~~~el~~~ia~aadvfV~PS~~E~fGltvlEAMa~GlPVVat~~GG~~EiI~dg~~G~li~p~d~e~ 695 (783)
++|.|+| .++.+++..+++. +|++|+||. |+||++++|||+||+|||+++.||..|++.++.+|++++++|+++
T Consensus 242 ~~V~~~g----~~~~~~~~~~~~~-ad~~v~ps~-e~~g~~~~Eama~G~Pvi~~~~~~~~e~i~~~~~G~~~~~~~~~~ 315 (351)
T cd03804 242 PNVTFLG----RVSDEELRDLYAR-ARAFLFPAE-EDFGIVPVEAMASGTPVIAYGKGGALETVIDGVTGILFEEQTVES 315 (351)
T ss_pred CCEEEec----CCCHHHHHHHHHh-CCEEEECCc-CCCCchHHHHHHcCCCEEEeCCCCCcceeeCCCCEEEeCCCCHHH
Confidence 8999999 7788999999995 999999999 999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhCCHHHHHHHH
Q 003962 696 AAEILVDFFEKCKADPSYWDKISLGGLKRIEEKYTWKIYSQRL 738 (783)
Q Consensus 696 lAeaI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~~~a~~l 738 (783)
+|++|..++ +|++ .+.+++++++ ++|+|+.+.+++
T Consensus 316 la~~i~~l~----~~~~---~~~~~~~~~~-~~~~~~~~~~~~ 350 (351)
T cd03804 316 LAAAVERFE----KNED---FDPQAIRAHA-ERFSESRFREKI 350 (351)
T ss_pred HHHHHHHHH----hCcc---cCHHHHHHHH-HhcCHHHHHHHh
Confidence 999997665 6773 2344455555 579999998875
No 66
>PLN02501 digalactosyldiacylglycerol synthase
Probab=99.97 E-value=1.3e-28 Score=281.33 Aligned_cols=273 Identities=11% Similarity=0.083 Sum_probs=194.5
Q ss_pred CCceEEEEcCCCc-hHH--HHHHHHhcCCcEEEEecCCCccCCCCCchhhhhccccccccchhhHhHHhh-hcCCEEEcC
Q 003962 382 GKPDLIIGNYSDG-NIV--ASLLAHKLGVTQCTIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAM-NHTDFIITS 457 (783)
Q Consensus 382 ~~pDIIh~h~~~~-~lv--a~llar~lgvp~v~t~H~l~~~~~~~s~~~~~~~~~~y~f~~~~~~e~~a~-~~AD~IIt~ 457 (783)
..|||||.+.+.. ++. |..+|++++ |+|.++|+............+ + .. +..+ ....+.. .+||.|+++
T Consensus 433 f~PDVVHLatP~~LGw~~~Glr~ArKl~-PVVasyHTny~eYl~~y~~g~--L-~~--~llk-~l~~~v~r~hcD~VIaP 505 (794)
T PLN02501 433 KDADIAILEEPEHLNWYHHGKRWTDKFN-HVVGVVHTNYLEYIKREKNGA--L-QA--FFVK-HINNWVTRAYCHKVLRL 505 (794)
T ss_pred cCCCEEEECCchhhccHHHHHHHHHHcC-CeEEEEeCCcHHHHhHhcchh--H-HH--HHHH-HHHHHHHHhhCCEEEcC
Confidence 5799999998876 677 888999999 999999985432111100000 0 00 0000 0011111 128999999
Q ss_pred CHHHHhhccccccccccccccccccceeeeccCCCCCCcEEEecCCccCCCCCCCchHHHhhccCchhhHHhhcChhhhh
Q 003962 458 TFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEEKRRLKSFHPEIEELLYSDVENK 537 (783)
Q Consensus 458 S~~~~~~~~~~v~qy~~~~~f~~p~l~~v~~gi~~~~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~~~~~l~~~~~~~ 537 (783)
|..... + . ...+..+ ||||++.|.|......+
T Consensus 506 S~atq~-L-------------------------~--~~vI~nV-nGVDte~F~P~~r~~~~------------------- 537 (794)
T PLN02501 506 SAATQD-L-------------------------P--KSVICNV-HGVNPKFLKIGEKVAEE------------------- 537 (794)
T ss_pred CHHHHH-h-------------------------c--ccceeec-ccccccccCCcchhHHH-------------------
Confidence 965542 0 0 1112222 69999999887553221
Q ss_pred hhhccccCCCCcEEEEEecccCCCCHHHHHHHHHHhHccCCCeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHHcCCCCc
Q 003962 538 EHLCVLKDRNKPILFTMARLDRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLNGQ 617 (783)
Q Consensus 538 ~~~gll~~~~k~iIl~vGRL~~~Kgl~~LieA~~~l~~~~~~~~LvIVG~g~~~~~~~~ee~~~~~~l~~li~~~~L~~~ 617 (783)
..+|. +...+.++|+|||.+.||++.|++|++.+.+..++++|+|+|+|+. .+++++++.++++ +
T Consensus 538 r~lgi--~~~~kgiLfVGRLa~EKGld~LLeAla~L~~~~pnvrLvIVGDGP~-----------reeLe~la~eLgL--~ 602 (794)
T PLN02501 538 RELGQ--QAFSKGAYFLGKMVWAKGYRELIDLLAKHKNELDGFNLDVFGNGED-----------AHEVQRAAKRLDL--N 602 (794)
T ss_pred HhcCC--ccccCceEEEEcccccCCHHHHHHHHHHHHhhCCCeEEEEEcCCcc-----------HHHHHHHHHHcCC--E
Confidence 12344 2233458999999999999999999999988778999999999976 3677888888887 4
Q ss_pred EEEccCCCCcCChHHHHHHHHccCcEEEeCCCCCCCcHHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHHHHH
Q 003962 618 FRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAA 697 (783)
Q Consensus 618 V~flG~~~~~~~~~el~~~ia~aadvfV~PS~~E~fGltvlEAMa~GlPVVat~~GG~~EiI~dg~~G~li~p~d~e~lA 697 (783)
|.|+|.+.+ ...+|+ ++|+||+||.+|+||++++||||||+|||+|+.+|. +++.++.+|+++ +|+++++
T Consensus 603 V~FLG~~dd------~~~lya-saDVFVlPS~sEgFGlVlLEAMA~GlPVVATd~pG~-e~V~~g~nGll~--~D~EafA 672 (794)
T PLN02501 603 LNFLKGRDH------ADDSLH-GYKVFINPSISDVLCTATAEALAMGKFVVCADHPSN-EFFRSFPNCLTY--KTSEDFV 672 (794)
T ss_pred EEecCCCCC------HHHHHH-hCCEEEECCCcccchHHHHHHHHcCCCEEEecCCCC-ceEeecCCeEec--CCHHHHH
Confidence 999994332 235666 599999999999999999999999999999999985 457788888865 6899999
Q ss_pred HHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Q 003962 698 EILVDFFEKCKADPSYWDKISLGGLKRIEEKYTWKIYSQRLLTLTGV 744 (783)
Q Consensus 698 eaI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~~~a~~ll~ly~~ 744 (783)
++|.+++ .|+..+..+.+ ...|||+..++++++....
T Consensus 673 eAI~~LL----sd~~~rl~~~a------~~~~SWeAaadrLle~~~~ 709 (794)
T PLN02501 673 AKVKEAL----ANEPQPLTPEQ------RYNLSWEAATQRFMEYSDL 709 (794)
T ss_pred HHHHHHH----hCchhhhHHHH------HhhCCHHHHHHHHHHhhcc
Confidence 9997776 56654333221 2489999999999997654
No 67
>PHA01630 putative group 1 glycosyl transferase
Probab=99.96 E-value=2e-28 Score=268.43 Aligned_cols=258 Identities=15% Similarity=0.138 Sum_probs=188.7
Q ss_pred EcCCCchHHHHHHHHhcCCcEEEEecCCCccCCCCCchhhhhccccccccchhhHhHHh-hhcCCEEEcCCHHHHhhccc
Q 003962 389 GNYSDGNIVASLLAHKLGVTQCTIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIA-MNHTDFIITSTFQEIAGSKD 467 (783)
Q Consensus 389 ~h~~~~~lva~llar~lgvp~v~t~H~l~~~~~~~s~~~~~~~~~~y~f~~~~~~e~~a-~~~AD~IIt~S~~~~~~~~~ 467 (783)
.|+....+..+-..++.|+|+++++|+... ... ..+... .+.+|.||++|....+.+.+
T Consensus 52 ~~~~~~~~~~~~~~~~~~~~~v~e~~~~~~------------------l~~--~~~~~~~~~~ad~ii~~S~~~~~~l~~ 111 (331)
T PHA01630 52 YYTIFNSMLFWKGIPHVGKNIVFEVADTDA------------------ISH--TALYFFRNQPVDEIVVPSQWSKNAFYT 111 (331)
T ss_pred ehhhhhHHHHHhhccccCCceEEEEEeech------------------hhH--HHHHHHhhccCCEEEECCHHHHHHHHH
Confidence 344333455555556678999999997210 000 112334 67899999999988764322
Q ss_pred cccccccccccccccceeeeccCCCCCCcEEEecCCccCCCCCCCchHHHhhccCchhhHHhhcChhhhhhhhccccCCC
Q 003962 468 TVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEEKRRLKSFHPEIEELLYSDVENKEHLCVLKDRN 547 (783)
Q Consensus 468 ~v~qy~~~~~f~~p~l~~v~~gi~~~~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~~~~~l~~~~~~~~~~gll~~~~ 547 (783)
. |++. +.++.+||||+|.+.|.|.... ..+
T Consensus 112 ~--------------------g~~~-~~~i~vIpNGVd~~~f~~~~~~-----------------------------~~~ 141 (331)
T PHA01630 112 S--------------------GLKI-PQPIYVIPHNLNPRMFEYKPKE-----------------------------KPH 141 (331)
T ss_pred c--------------------CCCC-CCCEEEECCCCCHHHcCCCccc-----------------------------cCC
Confidence 1 2221 3589999999999877654211 123
Q ss_pred CcEEEEEecccCCCCHHHHHHHHHHhHccCCCeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHHcCCCCcEEEccCCCCc
Q 003962 548 KPILFTMARLDRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNR 627 (783)
Q Consensus 548 k~iIl~vGRL~~~Kgl~~LieA~~~l~~~~~~~~LvIVG~g~~~~~~~~ee~~~~~~l~~li~~~~L~~~V~flG~~~~~ 627 (783)
+.++++.|++.+.||++.|++|++++.+..++++++++|++... .++ .++.+ +.| .
T Consensus 142 ~~vl~~~g~~~~~Kg~d~Li~A~~~l~~~~~~~~llivG~~~~~-----------~~l------~~~~~---~~~----~ 197 (331)
T PHA01630 142 PCVLAILPHSWDRKGGDIVVKIFHELQNEGYDFYFLIKSSNMLD-----------PRL------FGLNG---VKT----P 197 (331)
T ss_pred CEEEEEeccccccCCHHHHHHHHHHHHhhCCCEEEEEEeCcccc-----------hhh------ccccc---eec----c
Confidence 45677888999999999999999999888889999999976431 111 12222 234 5
Q ss_pred CChHHHHHHHHccCcEEEeCCCCCCCcHHHHHHHHcCCcEEEcCccccccccccCceEEEECC-----------------
Q 003962 628 VRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDP----------------- 690 (783)
Q Consensus 628 ~~~~el~~~ia~aadvfV~PS~~E~fGltvlEAMa~GlPVVat~~GG~~EiI~dg~~G~li~p----------------- 690 (783)
++.+++..+|+. +|+||+||.+|+||++++||||||+|||+|+.||..|+|.++.+|+++++
T Consensus 198 v~~~~l~~~y~~-aDv~v~pS~~E~fgl~~lEAMA~G~PVIas~~gg~~E~i~~~~ng~lv~~~~~~~~~~~~~~~~G~~ 276 (331)
T PHA01630 198 LPDDDIYSLFAG-CDILFYPVRGGAFEIPVIEALALGLDVVVTEKGAWSEWVLSNLDVYWIKSGRKPKLWYTNPIHVGYF 276 (331)
T ss_pred CCHHHHHHHHHh-CCEEEECCccccCChHHHHHHHcCCCEEEeCCCCchhhccCCCceEEeeecccccccccCCcccccc
Confidence 677999999995 99999999999999999999999999999999999999999988887753
Q ss_pred --CCHHHHHHHHHHHHHHhhCC--HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHh
Q 003962 691 --YHGEQAAEILVDFFEKCKAD--PSYWDKISLGGLKRIEEKYTWKIYSQRLLTLTGVY 745 (783)
Q Consensus 691 --~d~e~lAeaI~~~l~~l~~d--p~~~~~ms~~a~~~v~~~ysw~~~a~~ll~ly~~~ 745 (783)
.|.+++++++.+++ .| ++.++++..++.+.+.++|||+.++++++++|+.|
T Consensus 277 v~~~~~~~~~~ii~~l----~~~~~~~~~~~~~~~~~~~~~~fs~~~ia~k~~~l~~~~ 331 (331)
T PHA01630 277 LDPDIEDAYQKLLEAL----ANWTPEKKKENLEGRAILYRENYSYNAIAKMWEKILEKY 331 (331)
T ss_pred cCCCHHHHHHHHHHHH----hCCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhcC
Confidence 27788888887665 44 24444444445555669999999999999998753
No 68
>cd03793 GT1_Glycogen_synthase_GSY2_like Glycogen synthase, which is most closely related to the GT1 family of glycosyltransferases, catalyzes the transfer of a glucose molecule from UDP-glucose to a terminal branch of a glycogen molecule, a rate-limit step of glycogen biosynthesis. GSY2, the member of this family in S. cerevisiae, has been shown to possess glycogen synthase activity.
Probab=99.95 E-value=1.6e-26 Score=262.08 Aligned_cols=331 Identities=15% Similarity=0.143 Sum_probs=207.8
Q ss_pred CCCceEEEEcCCCchHHHHHHH-HhcCCcEEEEecCCCccCCCCC---chh-------hhhccccccccchhhHhHHhhh
Q 003962 381 QGKPDLIIGNYSDGNIVASLLA-HKLGVTQCTIAHALEKTKYPDS---DIY-------WKNLDDKYHFSCQFTADLIAMN 449 (783)
Q Consensus 381 ~~~pDIIh~h~~~~~lva~lla-r~lgvp~v~t~H~l~~~~~~~s---~~~-------~~~~~~~y~f~~~~~~e~~a~~ 449 (783)
..++||+|+|.|..+..+..++ +..++|.|+|.|+.+...+... +++ |........+..+...|+.+..
T Consensus 146 ~~~~dViH~HeWm~g~a~~~lK~~~~~VptVfTtHAT~~GR~l~~g~~~~y~~l~~~~~d~eA~~~~I~~r~~iE~~aa~ 225 (590)
T cd03793 146 DEPAVVAHFHEWQAGVGLPLLRKRKVDVSTIFTTHATLLGRYLCAGNVDFYNNLDYFDVDKEAGKRGIYHRYCIERAAAH 225 (590)
T ss_pred CCCCeEEEEcchhHhHHHHHHHHhCCCCCEEEEecccccccccccCCcccchhhhhcchhhhhhcccchHHHHHHHHHHh
Confidence 3679999999999988888888 5578999999999766554111 111 1111122233344456888999
Q ss_pred cCCEEEcCCHHHHhhccccccccccccccccccceeeeccCCCCCCcEEEecCCccCCCCCCCchHHHhhccCchhhHHh
Q 003962 450 HTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEEKRRLKSFHPEIEEL 529 (783)
Q Consensus 450 ~AD~IIt~S~~~~~~~~~~v~qy~~~~~f~~p~l~~v~~gi~~~~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~~~~~ 529 (783)
.||.++|+|+.+...+.... +.+ +++ |||||+|.+.|.+..+.......-..+|.+.
T Consensus 226 ~Ad~fttVS~it~~E~~~Ll-------------------~~~--pd~--ViPNGid~~~f~~~~e~~~~~~~~k~ki~~f 282 (590)
T cd03793 226 CAHVFTTVSEITAYEAEHLL-------------------KRK--PDV--VLPNGLNVKKFSALHEFQNLHAQSKEKINEF 282 (590)
T ss_pred hCCEEEECChHHHHHHHHHh-------------------CCC--CCE--EeCCCcchhhcccchhhhhhhHHhhhhhhHH
Confidence 99999999998887555442 121 444 9999999999877654332211112222221
Q ss_pred hcChhhhhhhhccccCCCCcEEEE-EecccC-CCCHHHHHHHHHHhHcc----CCC---eEEEEEeCCCCC---CCccHH
Q 003962 530 LYSDVENKEHLCVLKDRNKPILFT-MARLDR-VKNLTGLVEWYGKNAKL----REL---VNLVVVGGDRRK---ESKDLE 597 (783)
Q Consensus 530 l~~~~~~~~~~gll~~~~k~iIl~-vGRL~~-~Kgl~~LieA~~~l~~~----~~~---~~LvIVG~g~~~---~~~~~e 597 (783)
. ....+.++++ ++++++++| +||+.. .||++.||+|++++... ..+ +-|+|+=.+... .+....
T Consensus 283 ~--~~~~~~~~~~--~~d~tli~f~~GR~e~~nKGiDvlIeAl~rLn~~l~~~~~~~tVvafii~p~~~~~~~~~~l~g~ 358 (590)
T cd03793 283 V--RGHFYGHYDF--DLDKTLYFFTAGRYEFSNKGADMFLEALARLNYLLKVEGSDTTVVAFFIMPAKTNNFNVESLKGQ 358 (590)
T ss_pred H--HHHHhhhcCC--CCCCeEEEEEeeccccccCCHHHHHHHHHHHHHHHHhcCCCCeEEEEEEecCccCCcCHHhhcch
Confidence 1 1123455666 677888777 799998 99999999999998651 222 233444332110 000000
Q ss_pred -----HHHHHH------------------------------------------------------------HHHHHHHHc
Q 003962 598 -----EQAEMK------------------------------------------------------------KMYSLIDQY 612 (783)
Q Consensus 598 -----e~~~~~------------------------------------------------------------~l~~li~~~ 612 (783)
-.+-.+ .+-..+++.
T Consensus 359 ~~~~~l~~~~~~i~~~i~~~~~~~~l~~~~~~~~~~~~~~~~~~~kr~~~~~~~~~~~p~~tH~~~~~~~D~il~~~r~~ 438 (590)
T cd03793 359 AVRKQLRDTVNSVKEKIGKRLFEAALKGKLPDLEELLDKEDKVMLKRRIFALQRHSLPPVVTHNMVDDANDPILNHIRRI 438 (590)
T ss_pred HHHHHHHHHHHHHHHHhhhhhhhHhhccCCCChhhhcchhhHHHHHHHHHhhccCCCCCeeeecCCcCccCHHHHHHHHh
Confidence 000001 111122222
Q ss_pred CCC----Cc--EEEcc---CCCCcCChHHHHHHHHccCcEEEeCCCCCCCcHHHHHHHHcCCcEEEcCcccc----cccc
Q 003962 613 KLN----GQ--FRWIS---SQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGP----AEII 679 (783)
Q Consensus 613 ~L~----~~--V~flG---~~~~~~~~~el~~~ia~aadvfV~PS~~E~fGltvlEAMa~GlPVVat~~GG~----~EiI 679 (783)
+|. ++ |.|++ ..+|.+-..+.+.+++ .+|++|+||++|+||++++||||||+|||+|+.+|+ .|++
T Consensus 439 ~l~N~~~drVkvif~P~~L~~~~~~~g~~y~E~~~-g~dl~v~PS~yE~fG~~~lEAma~G~PvI~t~~~gf~~~v~E~v 517 (590)
T cd03793 439 QLFNSPEDRVKVVFHPEFLSSTNPLLGLDYEEFVR-GCHLGVFPSYYEPWGYTPAECTVMGIPSITTNLSGFGCFMEEHI 517 (590)
T ss_pred cCcCCCCCeEEEEEcccccCCCCCcCCcchHHHhh-hceEEEeccccCCCCcHHHHHHHcCCCEEEccCcchhhhhHHHh
Confidence 332 22 44443 1122333445667777 599999999999999999999999999999999998 5666
Q ss_pred ccC-ceEEEECC-------CCHHHHHHHHHHHHHHhhCCHHHHHHHHHHHH-HHHHHhCCHHHHHHHHHHHHHH
Q 003962 680 VNG-KSGYHIDP-------YHGEQAAEILVDFFEKCKADPSYWDKISLGGL-KRIEEKYTWKIYSQRLLTLTGV 744 (783)
Q Consensus 680 ~dg-~~G~li~p-------~d~e~lAeaI~~~l~~l~~dp~~~~~ms~~a~-~~v~~~ysw~~~a~~ll~ly~~ 744 (783)
.++ ..|+.+.+ .+.++++++| .++... +.++++.++++ ++..+.|+|+..++.|.+.|..
T Consensus 518 ~~~~~~gi~V~~r~~~~~~e~v~~La~~m----~~~~~~-~~r~~~~~r~~~~r~s~~f~W~~~~~~Y~~A~~~ 586 (590)
T cd03793 518 EDPESYGIYIVDRRFKSPDESVQQLTQYM----YEFCQL-SRRQRIIQRNRTERLSDLLDWRNLGRYYRKARQL 586 (590)
T ss_pred ccCCCceEEEecCCccchHHHHHHHHHHH----HHHhCC-cHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 555 35777763 3344455555 444444 56777777655 3444889999999999998764
No 69
>PRK00726 murG undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase; Provisional
Probab=99.95 E-value=2.1e-25 Score=246.51 Aligned_cols=343 Identities=15% Similarity=0.132 Sum_probs=233.1
Q ss_pred ceEEEEcccccccccCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHHCCCceeeceeEEeCCCCCCCCCcccceeeeecC
Q 003962 255 FNVVILTPHGYFAQDDVLGYPDTGGQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRLLPDAVGTTCGQRLEKVYG 334 (783)
Q Consensus 255 ~rI~iis~h~~~~~~~~lg~p~tGG~~vyv~d~araL~~eLa~~L~~~GheV~~~i~VvT~~~~~~~g~~~~~~~e~i~~ 334 (783)
|||+|++.. +||.+.... +|++.|.++||+|+ ++|..... . ....+.
T Consensus 2 ~~i~i~~~g-------------~gG~~~~~~--------~la~~L~~~g~ev~----vv~~~~~~-~----~~~~~~--- 48 (357)
T PRK00726 2 KKILLAGGG-------------TGGHVFPAL--------ALAEELKKRGWEVL----YLGTARGM-E----ARLVPK--- 48 (357)
T ss_pred cEEEEEcCc-------------chHhhhHHH--------HHHHHHHhCCCEEE----EEECCCch-h----hhcccc---
Confidence 898888621 367777777 67777899999999 88864311 0 001111
Q ss_pred ccCeEEEEeccCCCcccccccccccc-chhhHHHHHHHHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHhcCCcEEEEe
Q 003962 335 TKYSDILRVPFRTEKGVVRKWISRFE-VWPYLETYTEDVAVEIAKELQGKPDLIIGNYSDGNIVASLLAHKLGVTQCTIA 413 (783)
Q Consensus 335 ~~~v~Ilrvp~~~~~~~~~~~isr~~-i~~~l~~f~~~~~~~l~~~l~~~pDIIh~h~~~~~lva~llar~lgvp~v~t~ 413 (783)
.++.+++++.....+. ...++.. .+.++.. ... ..++++ +.+|||||+|.+..++.+.++++..++|++++.
T Consensus 49 -~g~~~~~~~~~~~~~~--~~~~~l~~~~~~~~~-~~~-~~~~ik--~~~pDvv~~~~~~~~~~~~~~~~~~~~p~v~~~ 121 (357)
T PRK00726 49 -AGIEFHFIPSGGLRRK--GSLANLKAPFKLLKG-VLQ-ARKILK--RFKPDVVVGFGGYVSGPGGLAARLLGIPLVIHE 121 (357)
T ss_pred -CCCcEEEEeccCcCCC--ChHHHHHHHHHHHHH-HHH-HHHHHH--hcCCCEEEECCCcchhHHHHHHHHcCCCEEEEc
Confidence 2567777776432110 0000000 1111111 111 122222 247999999987777888888888999999876
Q ss_pred cCCCccCCCCCchhhhhccccccccchhhHhHHhhhcCCEEEcCCHHHHhhccccccccccccccccccceeeeccCCCC
Q 003962 414 HALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVF 493 (783)
Q Consensus 414 H~l~~~~~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~~~~~~~~v~qy~~~~~f~~p~l~~v~~gi~~~ 493 (783)
|+... . ...++.++.+|.+++++++... .+ .
T Consensus 122 ~~~~~-----------~-----------~~~r~~~~~~d~ii~~~~~~~~-------------------------~~--~ 152 (357)
T PRK00726 122 QNAVP-----------G-----------LANKLLARFAKKVATAFPGAFP-------------------------EF--F 152 (357)
T ss_pred CCCCc-----------c-----------HHHHHHHHHhchheECchhhhh-------------------------cc--C
Confidence 64211 0 1134567789999998864321 01 2
Q ss_pred CCcEEEecCCccCCCCCCCchHHHhhccCchhhHHhhcChhhhhhhhccccCCCCcEEEEEecccCCCCHHHHH-HHHHH
Q 003962 494 DPKFNIVSPGADMSIYFPYTEEKRRLKSFHPEIEELLYSDVENKEHLCVLKDRNKPILFTMARLDRVKNLTGLV-EWYGK 572 (783)
Q Consensus 494 ~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~~~~~l~~~~~~~~~~gll~~~~k~iIl~vGRL~~~Kgl~~Li-eA~~~ 572 (783)
..++.+++||+|.+.+.+.... +++++ +++.++|+++|+....|++..++ +|+.+
T Consensus 153 ~~~i~vi~n~v~~~~~~~~~~~----------------------~~~~~--~~~~~~i~~~gg~~~~~~~~~~l~~a~~~ 208 (357)
T PRK00726 153 KPKAVVTGNPVREEILALAAPP----------------------ARLAG--REGKPTLLVVGGSQGARVLNEAVPEALAL 208 (357)
T ss_pred CCCEEEECCCCChHhhcccchh----------------------hhccC--CCCCeEEEEECCcHhHHHHHHHHHHHHHH
Confidence 6789999999998765442211 12344 45677889999988888876555 99988
Q ss_pred hHccCCCeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHHcCCCCcEEEccCCCCcCChHHHHHHHHccCcEEEeCCCCCC
Q 003962 573 NAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEA 652 (783)
Q Consensus 573 l~~~~~~~~LvIVG~g~~~~~~~~ee~~~~~~l~~li~~~~L~~~V~flG~~~~~~~~~el~~~ia~aadvfV~PS~~E~ 652 (783)
+.+. + ..++++|+|.. +.+.+..+ +++. |.+.|++ +++..+++. +|++|.+|-
T Consensus 209 ~~~~-~-~~~~~~G~g~~------------~~~~~~~~-~~~~--v~~~g~~------~~~~~~~~~-~d~~i~~~g--- 261 (357)
T PRK00726 209 LPEA-L-QVIHQTGKGDL------------EEVRAAYA-AGIN--AEVVPFI------DDMAAAYAA-ADLVICRAG--- 261 (357)
T ss_pred hhhC-c-EEEEEcCCCcH------------HHHHHHhh-cCCc--EEEeehH------hhHHHHHHh-CCEEEECCC---
Confidence 8653 3 56788898852 33344444 6663 9999943 467888885 999999762
Q ss_pred CcHHHHHHHHcCCcEEEcCccc--------cccccccCceEEEECCCC--HHHHHHHHHHHHHHhhCCHHHHHHHHHHHH
Q 003962 653 FGLTVVEAMTCGLPTFATCKGG--------PAEIIVNGKSGYHIDPYH--GEQAAEILVDFFEKCKADPSYWDKISLGGL 722 (783)
Q Consensus 653 fGltvlEAMa~GlPVVat~~GG--------~~EiI~dg~~G~li~p~d--~e~lAeaI~~~l~~l~~dp~~~~~ms~~a~ 722 (783)
+++++|||+||+|+|++..++ .++.+.+..+|+++++.| +++++++|.+++ +|++.+++|+++++
T Consensus 262 -~~~~~Ea~~~g~Pvv~~~~~~~~~~~~~~~~~~i~~~~~g~~~~~~~~~~~~l~~~i~~ll----~~~~~~~~~~~~~~ 336 (357)
T PRK00726 262 -ASTVAELAAAGLPAILVPLPHAADDHQTANARALVDAGAALLIPQSDLTPEKLAEKLLELL----SDPERLEAMAEAAR 336 (357)
T ss_pred -HHHHHHHHHhCCCEEEecCCCCCcCcHHHHHHHHHHCCCEEEEEcccCCHHHHHHHHHHHH----cCHHHHHHHHHHHH
Confidence 689999999999999987653 235677777999999888 999999996655 89999999999999
Q ss_pred HHHHHhCCHHHHHHHHHHHHH
Q 003962 723 KRIEEKYTWKIYSQRLLTLTG 743 (783)
Q Consensus 723 ~~v~~~ysw~~~a~~ll~ly~ 743 (783)
+.+ +.++-+.+++.++++.+
T Consensus 337 ~~~-~~~~~~~~~~~~~~~~~ 356 (357)
T PRK00726 337 ALG-KPDAAERLADLIEELAR 356 (357)
T ss_pred hcC-CcCHHHHHHHHHHHHhh
Confidence 986 88999999999988753
No 70
>PHA01633 putative glycosyl transferase group 1
Probab=99.94 E-value=3.3e-25 Score=241.51 Aligned_cols=224 Identities=15% Similarity=0.161 Sum_probs=167.7
Q ss_pred hhhcCCEEEcCCHHHHhhccccccccccccccccccceeeeccCCCCCCcEEEecCCccCCCCCCCchHHHhhccCchhh
Q 003962 447 AMNHTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEEKRRLKSFHPEI 526 (783)
Q Consensus 447 a~~~AD~IIt~S~~~~~~~~~~v~qy~~~~~f~~p~l~~v~~gi~~~~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~~ 526 (783)
.|.+.+.+|++|...++.+.+. |++ .+ + +|+||+|.+.|.|.......
T Consensus 89 ~m~~~~~vIavS~~t~~~L~~~--------------------G~~--~~-i-~I~~GVD~~~f~p~~~~~~~-------- 136 (335)
T PHA01633 89 YLLQDVKFIPNSKFSAENLQEV--------------------GLQ--VD-L-PVFHGINFKIVENAEKLVPQ-------- 136 (335)
T ss_pred HHhcCCEEEeCCHHHHHHHHHh--------------------CCC--Cc-e-eeeCCCChhhcCccchhhHH--------
Confidence 4566778999998877643321 333 22 3 47899999988775421110
Q ss_pred HHhhcChhhhhhhhccccCCCCcEEEEEecccCCCCHHHHHHHHHHhHccCCC----eEEEEEeCCCCCCCccHHHHHHH
Q 003962 527 EELLYSDVENKEHLCVLKDRNKPILFTMARLDRVKNLTGLVEWYGKNAKLREL----VNLVVVGGDRRKESKDLEEQAEM 602 (783)
Q Consensus 527 ~~~l~~~~~~~~~~gll~~~~k~iIl~vGRL~~~Kgl~~LieA~~~l~~~~~~----~~LvIVG~g~~~~~~~~ee~~~~ 602 (783)
.+++++.. .++.++++++||+++.||++.|++|+.++.+..|+ ++++++|++
T Consensus 137 ---------~r~~~~~~-~~~~~~i~~vGRl~~~KG~~~LI~A~~~L~~~~p~~~~~i~l~ivG~~-------------- 192 (335)
T PHA01633 137 ---------LKQKLDKD-FPDTIKFGIVSGLTKRKNMDLMLQVFNELNTKYPDIAKKIHFFVISHK-------------- 192 (335)
T ss_pred ---------HHHHhCcC-CCCCeEEEEEeCCccccCHHHHHHHHHHHHHhCCCccccEEEEEEcHH--------------
Confidence 12233321 13567899999999999999999999999877664 578877632
Q ss_pred HHHHHHHHHcCCCCcEEEccCCCCcCChHHHHHHHHccCcEEEeCCCCCCCcHHHHHHHHcCCcEEEcCccccccccc--
Q 003962 603 KKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIV-- 680 (783)
Q Consensus 603 ~~l~~li~~~~L~~~V~flG~~~~~~~~~el~~~ia~aadvfV~PS~~E~fGltvlEAMa~GlPVVat~~GG~~EiI~-- 680 (783)
..+++++.++|+|+|... .++.+++.++++. +|+||+||.+|+||++++|||+||+|||+|+.||..|++.
T Consensus 193 -----~~~~l~l~~~V~f~g~~G-~~~~~dl~~~y~~-aDifV~PS~~EgfGlvlLEAMA~G~PVVas~~~~l~Ei~g~~ 265 (335)
T PHA01633 193 -----QFTQLEVPANVHFVAEFG-HNSREYIFAFYGA-MDFTIVPSGTEGFGMPVLESMAMGTPVIHQLMPPLDEFTSWQ 265 (335)
T ss_pred -----HHHHcCCCCcEEEEecCC-CCCHHHHHHHHHh-CCEEEECCccccCCHHHHHHHHcCCCEEEccCCCceeecCCc
Confidence 124567788999996332 4567899999995 9999999999999999999999999999999999988643
Q ss_pred --------------cC--ceEEEECCCCHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHH
Q 003962 681 --------------NG--KSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEEKYTWKIYSQRLL 739 (783)
Q Consensus 681 --------------dg--~~G~li~p~d~e~lAeaI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~~~a~~ll 739 (783)
++ ..||.+++.|++++|++|..+++. .|++ ..+.++++++ +.|+|+.++++|+
T Consensus 266 ~~~Li~~~~v~~~~~~~~g~g~~~~~~d~~~la~ai~~~~~~--~~~~---~~~~~~~~~a-~~f~~~~~~~~~~ 334 (335)
T PHA01633 266 WNLLIKSSKVEEYYDKEHGQKWKIHKFQIEDMANAIILAFEL--QDRE---ERSMKLKELA-KKYDIRNLYTRFL 334 (335)
T ss_pred cceeeCCCCHHHhcCcccCceeeecCCCHHHHHHHHHHHHhc--cChh---hhhHHHHHHH-HhcCHHHHHHHhh
Confidence 22 247789999999999999877631 3443 3367777776 8999999999986
No 71
>cd03788 GT1_TPS Trehalose-6-Phosphate Synthase (TPS) is a glycosyltransferase that catalyses the synthesis of alpha,alpha-1,1-trehalose-6-phosphate from glucose-6-phosphate using a UDP-glucose donor. It is a key enzyme in the trehalose synthesis pathway. Trehalose is a nonreducing disaccharide present in a wide variety of organisms and may serve as a source of energy and carbon. It is characterized most notably in insect, plant, and microbial cells. Its production is often associated with a variety of stress conditions, including desiccation, dehydration, heat, cold, and oxidation. This family represents the catalytic domain of the TPS. Some members of this domain family coexist with a C-terminal trehalose phosphatase domain.
Probab=99.94 E-value=1.9e-25 Score=255.53 Aligned_cols=312 Identities=13% Similarity=0.072 Sum_probs=213.4
Q ss_pred CceEEEEcCCCchHHHHHHHHh-cCCcEEEEecCCCccCCCCCchhhhhccccccccchhhHhHHhhhcCCEEEcCCHHH
Q 003962 383 KPDLIIGNYSDGNIVASLLAHK-LGVTQCTIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTFQE 461 (783)
Q Consensus 383 ~pDIIh~h~~~~~lva~llar~-lgvp~v~t~H~l~~~~~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~ 461 (783)
..|+|+.|.+...+++.++.++ .+.|+++..|... |.+.. |..+.. + ..-...+-.+|.|...|...
T Consensus 131 ~~d~iwihDyhl~llp~~lr~~~~~~~i~~f~Hipf----P~~e~-~~~lp~------~-~~ll~~~l~~D~igF~t~~~ 198 (460)
T cd03788 131 PGDLVWVHDYHLLLLPQMLRERGPDARIGFFLHIPF----PSSEI-FRCLPW------R-EELLRGLLGADLIGFQTERY 198 (460)
T ss_pred CCCEEEEeChhhhHHHHHHHhhCCCCeEEEEEeCCC----CChHH-HhhCCC------h-HHHHHHHhcCCEEEECCHHH
Confidence 5799999999877777777655 3589999999753 22222 221111 0 11223566799999998765
Q ss_pred HhhccccccccccccccccccceeeeccCCCCCCcEEEecCCccCCCCCCCchHHHhhccCchhhHHhhcChhhhhhhhc
Q 003962 462 IAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEEKRRLKSFHPEIEELLYSDVENKEHLC 541 (783)
Q Consensus 462 ~~~~~~~v~qy~~~~~f~~p~l~~v~~gi~~~~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~~~~~l~~~~~~~~~~g 541 (783)
...+.+.......... +. .......|. ..++.++|||||.+.|.+......... ..++..+
T Consensus 199 ~~~Fl~~~~~~l~~~~-~~-~~~i~~~g~---~~~i~vip~GID~~~f~~~~~~~~~~~--------------~~~~~~~ 259 (460)
T cd03788 199 ARNFLSCCSRLLGLEV-TD-DGGVEYGGR---RVRVGAFPIGIDPDAFRKLAASPEVQE--------------RAAELRE 259 (460)
T ss_pred HHHHHHHHHHHcCCcc-cC-CceEEECCE---EEEEEEEeCeEcHHHHHHHhcCchhHH--------------HHHHHHH
Confidence 5433332111100000 00 000011111 346889999999988865422111000 0011223
Q ss_pred cccCCCCcEEEEEecccCCCCHHHHHHHHHHhHccCCC----eEEEEEeCCCCCCCccHHHHHHHHHHHHHHHHcCCC--
Q 003962 542 VLKDRNKPILFTMARLDRVKNLTGLVEWYGKNAKLREL----VNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLN-- 615 (783)
Q Consensus 542 ll~~~~k~iIl~vGRL~~~Kgl~~LieA~~~l~~~~~~----~~LvIVG~g~~~~~~~~ee~~~~~~l~~li~~~~L~-- 615 (783)
. .+++++|+++||+++.||+..+++|++++.+.+|+ ++|+++|++... ...+.....+++++++.+.+..
T Consensus 260 ~--~~~~~~il~vgRl~~~Kgi~~ll~A~~~ll~~~p~~~~~v~Lv~vg~~~~g--~~~~~~~l~~~l~~~v~~in~~~g 335 (460)
T cd03788 260 R--LGGRKLIVGVDRLDYSKGIPERLLAFERLLERYPEWRGKVVLVQIAVPSRT--DVPEYQELRREVEELVGRINGKFG 335 (460)
T ss_pred h--cCCCEEEEEecCccccCCHHHHHHHHHHHHHhChhhcCCEEEEEEccCCCc--CcHHHHHHHHHHHHHHHHHHhccC
Confidence 3 45788999999999999999999999999887776 679999875421 1122234455666666554321
Q ss_pred ----CcEEEccCCCCcCChHHHHHHHHccCcEEEeCCCCCCCcHHHHHHHHcCCc----EEEcCccccccccccCceEEE
Q 003962 616 ----GQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLP----TFATCKGGPAEIIVNGKSGYH 687 (783)
Q Consensus 616 ----~~V~flG~~~~~~~~~el~~~ia~aadvfV~PS~~E~fGltvlEAMa~GlP----VVat~~GG~~EiI~dg~~G~l 687 (783)
..|.+++ ..++.+++..+|+. +|+||+||..||||++++|||+||+| ||+|+.+|..+. +.+|++
T Consensus 336 ~~~~~~v~~~~---g~v~~~el~~~y~~-aDv~v~pS~~Eg~~lv~lEAma~g~p~~g~vV~S~~~G~~~~---~~~g~l 408 (460)
T cd03788 336 TLDWTPVRYLY---RSLPREELAALYRA-ADVALVTPLRDGMNLVAKEYVACQDDDPGVLILSEFAGAAEE---LSGALL 408 (460)
T ss_pred CCCceeEEEEe---CCCCHHHHHHHHHh-ccEEEeCccccccCcccceeEEEecCCCceEEEeccccchhh---cCCCEE
Confidence 2355553 16788999999995 99999999999999999999999999 999999888877 568999
Q ss_pred ECCCCHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHH
Q 003962 688 IDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEEKYTWKIYSQRLLT 740 (783)
Q Consensus 688 i~p~d~e~lAeaI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~~~a~~ll~ 740 (783)
++|.|++++|++|.++++ .+++.++++++++++.+ .+|||+..++++++
T Consensus 409 v~p~d~~~la~ai~~~l~---~~~~e~~~~~~~~~~~v-~~~~~~~w~~~~l~ 457 (460)
T cd03788 409 VNPYDIDEVADAIHRALT---MPLEERRERHRKLREYV-RTHDVQAWANSFLD 457 (460)
T ss_pred ECCCCHHHHHHHHHHHHc---CCHHHHHHHHHHHHHHH-HhCCHHHHHHHHHH
Confidence 999999999999977762 35678889999999998 78999999999875
No 72
>cd03785 GT1_MurG MurG is an N-acetylglucosaminyltransferase, the last enzyme involved in the intracellular phase of peptidoglycan biosynthesis. It transfers N-acetyl-D-glucosamine (GlcNAc) from UDP-GlcNAc to the C4 hydroxyl of a lipid-linked N-acetylmuramoyl pentapeptide (NAM). The resulting disaccharide is then transported across the cell membrane, where it is polymerized into NAG-NAM cell-wall repeat structure. MurG belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains, each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=99.93 E-value=3.4e-24 Score=235.44 Aligned_cols=325 Identities=14% Similarity=0.115 Sum_probs=221.2
Q ss_pred CCCcchhhHHHHHHHHHHHHHHHHHHCCCceeeceeEEeCCCCCCCCCcccceeeeecCccCeEEEEeccCCCccccccc
Q 003962 276 DTGGQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRLLPDAVGTTCGQRLEKVYGTKYSDILRVPFRTEKGVVRKW 355 (783)
Q Consensus 276 ~tGG~~vyv~d~araL~~eLa~~L~~~GheV~~~i~VvT~~~~~~~g~~~~~~~e~i~~~~~v~Ilrvp~~~~~~~~~~~ 355 (783)
.+||...++. +|++.|.++||+|+ |+|...... .+. ....++++.++|+....+
T Consensus 8 ~~gG~~~~~~--------~la~~l~~~G~ev~----v~~~~~~~~--------~~~-~~~~~~~~~~~~~~~~~~----- 61 (350)
T cd03785 8 GTGGHIFPAL--------ALAEELRERGAEVL----FLGTKRGLE--------ARL-VPKAGIPLHTIPVGGLRR----- 61 (350)
T ss_pred CchhhhhHHH--------HHHHHHHhCCCEEE----EEECCCcch--------hhc-ccccCCceEEEEecCcCC-----
Confidence 3588888888 77777899999999 888753211 000 111256777777643211
Q ss_pred cccccchhhHHHH---HH--HHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHhcCCcEEEEecCCCccCCCCCchhhhh
Q 003962 356 ISRFEVWPYLETY---TE--DVAVEIAKELQGKPDLIIGNYSDGNIVASLLAHKLGVTQCTIAHALEKTKYPDSDIYWKN 430 (783)
Q Consensus 356 isr~~i~~~l~~f---~~--~~~~~l~~~l~~~pDIIh~h~~~~~lva~llar~lgvp~v~t~H~l~~~~~~~s~~~~~~ 430 (783)
...+..+..+ .. .....+.+ +.+||+||+|.+..++.+.++++..++|+++..|+... .
T Consensus 62 ---~~~~~~~~~~~~~~~~~~~~~~~i~--~~~pDvI~~~~~~~~~~~~~~a~~~~~p~v~~~~~~~~-----------~ 125 (350)
T cd03785 62 ---KGSLKKLKAPFKLLKGVLQARKILK--KFKPDVVVGFGGYVSGPVGLAAKLLGIPLVIHEQNAVP-----------G 125 (350)
T ss_pred ---CChHHHHHHHHHHHHHHHHHHHHHH--hcCCCEEEECCCCcchHHHHHHHHhCCCEEEEcCCCCc-----------c
Confidence 1111111111 11 11122222 24799999998776777788888899999876554211 0
Q ss_pred ccccccccchhhHhHHhhhcCCEEEcCCHHHHhhccccccccccccccccccceeeeccCCCCCCcEEEecCCccCCCCC
Q 003962 431 LDDKYHFSCQFTADLIAMNHTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYF 510 (783)
Q Consensus 431 ~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~~~~~~~~v~qy~~~~~f~~p~l~~v~~gi~~~~~k~~VIpnGvD~~~f~ 510 (783)
...++.++.+|.|+++|+...+. +. +.++.+|+||+|.+.+.
T Consensus 126 -----------~~~~~~~~~~~~vi~~s~~~~~~-------------------------~~--~~~~~~i~n~v~~~~~~ 167 (350)
T cd03785 126 -----------LANRLLARFADRVALSFPETAKY-------------------------FP--KDKAVVTGNPVREEILA 167 (350)
T ss_pred -----------HHHHHHHHhhCEEEEcchhhhhc-------------------------CC--CCcEEEECCCCchHHhh
Confidence 01234566799999999876541 11 56899999999987665
Q ss_pred CCchHHHhhccCchhhHHhhcChhhhhhhhccccCCCCcEEEEEecccCCCCHHH-HHHHHHHhHccCCCeEE-EEEeCC
Q 003962 511 PYTEEKRRLKSFHPEIEELLYSDVENKEHLCVLKDRNKPILFTMARLDRVKNLTG-LVEWYGKNAKLRELVNL-VVVGGD 588 (783)
Q Consensus 511 p~~~~~~r~~~~~~~~~~~l~~~~~~~~~~gll~~~~k~iIl~vGRL~~~Kgl~~-LieA~~~l~~~~~~~~L-vIVG~g 588 (783)
+... ++.+++ ++++++|+++|+....|+... +++++..+.+ +++++ +++|++
T Consensus 168 ~~~~----------------------~~~~~~--~~~~~~i~~~~g~~~~~~~~~~l~~a~~~l~~--~~~~~~~i~G~g 221 (350)
T cd03785 168 LDRE----------------------RARLGL--RPGKPTLLVFGGSQGARAINEAVPEALAELLR--KRLQVIHQTGKG 221 (350)
T ss_pred hhhh----------------------HHhcCC--CCCCeEEEEECCcHhHHHHHHHHHHHHHHhhc--cCeEEEEEcCCc
Confidence 4221 133555 567778888887777777654 5588888763 45664 466776
Q ss_pred CCCCCccHHHHHHHHHHHHHHHHcCCCCcEEEccCCCCcCChHHHHHHHHccCcEEEeCCCCCCCcHHHHHHHHcCCcEE
Q 003962 589 RRKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTF 668 (783)
Q Consensus 589 ~~~~~~~~ee~~~~~~l~~li~~~~L~~~V~flG~~~~~~~~~el~~~ia~aadvfV~PS~~E~fGltvlEAMa~GlPVV 668 (783)
. .+++++.++++ .++|.|.|++ +++..+++. +|++|.+|- +++++|||+||+|||
T Consensus 222 -~-----------~~~l~~~~~~~--~~~v~~~g~~------~~~~~~l~~-ad~~v~~sg----~~t~~Eam~~G~Pvv 276 (350)
T cd03785 222 -D-----------LEEVKKAYEEL--GVNYEVFPFI------DDMAAAYAA-ADLVISRAG----ASTVAELAALGLPAI 276 (350)
T ss_pred -c-----------HHHHHHHHhcc--CCCeEEeehh------hhHHHHHHh-cCEEEECCC----HhHHHHHHHhCCCEE
Confidence 2 24556666665 4789999943 467788885 999998762 689999999999999
Q ss_pred EcCccc--------cccccccCceEEEECCC--CHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhCCHHHHHH
Q 003962 669 ATCKGG--------PAEIIVNGKSGYHIDPY--HGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEEKYTWKIYSQ 736 (783)
Q Consensus 669 at~~GG--------~~EiI~dg~~G~li~p~--d~e~lAeaI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~~~a~ 736 (783)
+++.++ ..+.+.++.+|++++++ |+++++++|.+++ +|++.+++|++++++++ +.+.-+++++
T Consensus 277 ~~~~~~~~~~~~~~~~~~l~~~g~g~~v~~~~~~~~~l~~~i~~ll----~~~~~~~~~~~~~~~~~-~~~~~~~i~~ 349 (350)
T cd03785 277 LIPLPYAADDHQTANARALVKAGAAVLIPQEELTPERLAAALLELL----SDPERLKAMAEAARSLA-RPDAAERIAD 349 (350)
T ss_pred EeecCCCCCCcHHHhHHHHHhCCCEEEEecCCCCHHHHHHHHHHHh----cCHHHHHHHHHHHHhcC-CCCHHHHHHh
Confidence 987654 24667777799999987 8999999997666 89999999999999887 5666666553
No 73
>TIGR01133 murG undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase. RL J Bacteriol 1993 Mar;175(6):1841-3
Probab=99.93 E-value=9e-24 Score=231.87 Aligned_cols=316 Identities=15% Similarity=0.120 Sum_probs=205.4
Q ss_pred HHHHHHHHCCCceeeceeEEeCCCCCCCCCcccceeeeecCccCeEEEEeccCCCccccccccccccchhhHHHHHH--H
Q 003962 294 EMLLRIKQQGLDITPQILIITRLLPDAVGTTCGQRLEKVYGTKYSDILRVPFRTEKGVVRKWISRFEVWPYLETYTE--D 371 (783)
Q Consensus 294 eLa~~L~~~GheV~~~i~VvT~~~~~~~g~~~~~~~e~i~~~~~v~Ilrvp~~~~~~~~~~~isr~~i~~~l~~f~~--~ 371 (783)
.|+++|.++||+|+ ++|+..... . . .....++.+.+++.....+ ......+.....+.. .
T Consensus 19 ~La~~L~~~g~eV~----vv~~~~~~~--~----~---~~~~~g~~~~~i~~~~~~~-----~~~~~~l~~~~~~~~~~~ 80 (348)
T TIGR01133 19 AVAEELIKRGVEVL----WLGTKRGLE--K----R---LVPKAGIEFYFIPVGGLRR-----KGSFRLIKTPLKLLKAVF 80 (348)
T ss_pred HHHHHHHhCCCEEE----EEeCCCcch--h----c---ccccCCCceEEEeccCcCC-----CChHHHHHHHHHHHHHHH
Confidence 67788899999999 888632110 0 0 0111356777777653211 000111111111111 1
Q ss_pred HHHHHHHHcCCCceEEEEcCCCchHHHHHHHHhcCCcEEEEecCCCccCCCCCchhhhhccccccccchhhHhHHhhhcC
Q 003962 372 VAVEIAKELQGKPDLIIGNYSDGNIVASLLAHKLGVTQCTIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHT 451 (783)
Q Consensus 372 ~~~~l~~~l~~~pDIIh~h~~~~~lva~llar~lgvp~v~t~H~l~~~~~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~A 451 (783)
...++.+ +.+||+||+|....+..+.++++..++|+|+..|+... . ..+++..+.+
T Consensus 81 ~l~~~i~--~~~pDvVi~~~~~~~~~~~~~~~~~~~p~v~~~~~~~~-----------------~-----~~~~~~~~~~ 136 (348)
T TIGR01133 81 QARRILK--KFKPDAVIGFGGYVSGPAGLAAKLLGIPLFHHEQNAVP-----------------G-----LTNKLLSRFA 136 (348)
T ss_pred HHHHHHH--hcCCCEEEEcCCcccHHHHHHHHHcCCCEEEECCCCCc-----------------c-----HHHHHHHHHh
Confidence 1222222 25799999998776777777888899998754332110 0 0134567789
Q ss_pred CEEEcCCHHHHhhccccccccccccccccccceeeeccCCCCCCcEEEecCCccCCCCCCCchHHHhhccCchhhHHhhc
Q 003962 452 DFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEEKRRLKSFHPEIEELLY 531 (783)
Q Consensus 452 D~IIt~S~~~~~~~~~~v~qy~~~~~f~~p~l~~v~~gi~~~~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~~~~~l~ 531 (783)
|.+++.|+.+.+. -+..+|+||+|...+.+....
T Consensus 137 d~ii~~~~~~~~~------------------------------~~~~~i~n~v~~~~~~~~~~~---------------- 170 (348)
T TIGR01133 137 KKVLISFPGAKDH------------------------------FEAVLVGNPVRQEIRSLPVPR---------------- 170 (348)
T ss_pred CeeEECchhHhhc------------------------------CCceEEcCCcCHHHhcccchh----------------
Confidence 9999999876541 023689999987655432111
Q ss_pred ChhhhhhhhccccCCCCcEEEEEecccCCCCHHH-HHHHHHHhHccCCCeEEEEEeCCCCCCCccHHHHHHHHHHHHHHH
Q 003962 532 SDVENKEHLCVLKDRNKPILFTMARLDRVKNLTG-LVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLID 610 (783)
Q Consensus 532 ~~~~~~~~~gll~~~~k~iIl~vGRL~~~Kgl~~-LieA~~~l~~~~~~~~LvIVG~g~~~~~~~~ee~~~~~~l~~li~ 610 (783)
+.+++ ++++++|+++|+....|++.. +++++.++.+. ++++++++++.. .+++++.++
T Consensus 171 ------~~~~~--~~~~~~i~~~gg~~~~~~~~~~l~~a~~~l~~~--~~~~~~~~g~~~-----------~~~l~~~~~ 229 (348)
T TIGR01133 171 ------ERFGL--REGKPTILVLGGSQGAKILNELVPKALAKLAEK--GIQIVHQTGKND-----------LEKVKNVYQ 229 (348)
T ss_pred ------hhcCC--CCCCeEEEEECCchhHHHHHHHHHHHHHHHhhc--CcEEEEECCcch-----------HHHHHHHHh
Confidence 12455 567788999998888888654 55888887653 456655444321 256677777
Q ss_pred HcCCCCcEEEccCCCCcCChHHHHHHHHccCcEEEeCCCCCCCcHHHHHHHHcCCcEEEcCccc-------cccccccCc
Q 003962 611 QYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGG-------PAEIIVNGK 683 (783)
Q Consensus 611 ~~~L~~~V~flG~~~~~~~~~el~~~ia~aadvfV~PS~~E~fGltvlEAMa~GlPVVat~~GG-------~~EiI~dg~ 683 (783)
++++.+.+.|.. .++..+|+ ++|++|.+| + |++++|||+||+|+|+++.+| ..+++.++.
T Consensus 230 ~~~l~~~v~~~~--------~~~~~~l~-~ad~~v~~~---g-~~~l~Ea~~~g~Pvv~~~~~~~~~~~~~~~~~i~~~~ 296 (348)
T TIGR01133 230 ELGIEAIVTFID--------ENMAAAYA-AADLVISRA---G-ASTVAELAAAGVPAILIPYPYAADDQYYNAKFLEDLG 296 (348)
T ss_pred hCCceEEecCcc--------cCHHHHHH-hCCEEEECC---C-hhHHHHHHHcCCCEEEeeCCCCccchhhHHHHHHHCC
Confidence 777755555552 14667777 499999875 2 789999999999999997754 235788899
Q ss_pred eEEEECCCC--HHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhCCHHHHHH
Q 003962 684 SGYHIDPYH--GEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEEKYTWKIYSQ 736 (783)
Q Consensus 684 ~G~li~p~d--~e~lAeaI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~~~a~ 736 (783)
+|++++++| +++++++|.+++ +||+.+++|++++++++ +...-+++++
T Consensus 297 ~G~~~~~~~~~~~~l~~~i~~ll----~~~~~~~~~~~~~~~~~-~~~~~~~i~~ 346 (348)
T TIGR01133 297 AGLVIRQKELLPEKLLEALLKLL----LDPANLEAMAEAARKLA-KPDAAKRIAE 346 (348)
T ss_pred CEEEEecccCCHHHHHHHHHHHH----cCHHHHHHHHHHHHhcC-CccHHHHHHh
Confidence 999999876 999999996665 89999999999998876 4455554443
No 74
>TIGR02400 trehalose_OtsA alpha,alpha-trehalose-phosphate synthase [UDP-forming]. This enzyme catalyzes the key, penultimate step in biosynthesis of trehalose, a compatible solute made as an osmoprotectant in some species in all three domains of life. The gene symbol OtsA stands for osmotically regulated trehalose synthesis A. Trehalose helps protect against both osmotic and thermal stresses, and is made from two glucose subunits. This model excludes glucosylglycerol-phosphate synthase, an enzyme of an analogous osmoprotectant system in many cyanobacterial strains. This model does not identify archaeal examples, as they are more divergent than glucosylglycerol-phosphate synthase. Sequences that score in the gray zone between the trusted and noise cutoffs include a number of yeast multidomain proteins in which the N-terminal domain may be functionally equivalent to this family. The gray zone also includes the OtsA of Cornyebacterium glutamicum (and related species), shown to be responsib
Probab=99.92 E-value=2.1e-23 Score=237.52 Aligned_cols=317 Identities=16% Similarity=0.170 Sum_probs=215.8
Q ss_pred HHHHHcCCCceEEEEcCCCchHHHHHHHHhc-CCcEEEEecCCCccCCCCCchhhhhccccccccchhhHhHHhhhcCCE
Q 003962 375 EIAKELQGKPDLIIGNYSDGNIVASLLAHKL-GVTQCTIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDF 453 (783)
Q Consensus 375 ~l~~~l~~~pDIIh~h~~~~~lva~llar~l-gvp~v~t~H~l~~~~~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~AD~ 453 (783)
.+....+ .-|+|..|...-.+++.++.++. ..++.+..|.. +|.++++ ..+- ....-+..|-.||.
T Consensus 120 ~i~~~~~-~~d~vwvhDYhl~l~p~~lr~~~~~~~igfFlHip----fP~~e~f-~~lp-------~r~~il~gll~~dl 186 (456)
T TIGR02400 120 ALAPLLQ-PGDIVWVHDYHLMLLPAMLRELGVQNKIGFFLHIP----FPSSEIY-RTLP-------WRRELLEGLLAYDL 186 (456)
T ss_pred HHHHhCC-CCCEEEEecchhhHHHHHHHhhCCCCeEEEEEeCC----CCChHHH-hhCC-------cHHHHHHHHhcCCE
Confidence 3444333 45899999998878888887764 45788889954 2333322 1111 11122347889999
Q ss_pred EEcCCHHHHhhccccccccccccccccccceeeeccCCC--CCCcEEEecCCccCCCCCCCchHHHhhccCchhhHHhhc
Q 003962 454 IITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDV--FDPKFNIVSPGADMSIYFPYTEEKRRLKSFHPEIEELLY 531 (783)
Q Consensus 454 IIt~S~~~~~~~~~~v~qy~~~~~f~~p~l~~v~~gi~~--~~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~~~~~l~ 531 (783)
|-..|+..++.+.+....... +-....++.. -..++.++|||+|.+.|.+..........
T Consensus 187 igF~t~~~~~~Fl~~~~~~l~--------~~~~~~~~~~~g~~~~v~viP~GID~~~f~~~~~~~~~~~~---------- 248 (456)
T TIGR02400 187 VGFQTYDDARNFLSAVSRELG--------LETLPNGVESGGRTVRVGAFPIGIDVDRFAEQAKKPSVQKR---------- 248 (456)
T ss_pred EEECCHHHHHHHHHHHHHHhC--------CcccCCceEECCcEEEEEEecCcCCHHHHHHHhcChhHHHH----------
Confidence 999999888765554322110 0000011111 13468899999999988754322110000
Q ss_pred ChhhhhhhhccccCCCCcEEEEEecccCCCCHHHHHHHHHHhHccCCC----eEEEEEeCCCCCCCccHHHHHHHHHHHH
Q 003962 532 SDVENKEHLCVLKDRNKPILFTMARLDRVKNLTGLVEWYGKNAKLREL----VNLVVVGGDRRKESKDLEEQAEMKKMYS 607 (783)
Q Consensus 532 ~~~~~~~~~gll~~~~k~iIl~vGRL~~~Kgl~~LieA~~~l~~~~~~----~~LvIVG~g~~~~~~~~ee~~~~~~l~~ 607 (783)
....++.+ .++++|+++||+++.||+..+++|++++.+.+|+ +.|+++|+.... ...+.....+.+++
T Consensus 249 -~~~lr~~~-----~~~~vIl~VgRLd~~KGi~~ll~A~~~ll~~~p~~~~~v~Lv~v~~p~rg--~~~~~~~l~~~i~~ 320 (456)
T TIGR02400 249 -IAELRESL-----KGRKLIIGVDRLDYSKGLPERLLAFERFLEEHPEWRGKVVLVQIAVPSRG--DVPEYQQLRRQVEE 320 (456)
T ss_pred -HHHHHHHc-----CCCeEEEEccccccccCHHHHHHHHHHHHHhCccccCceEEEEEecCCcc--CchHHHHHHHHHHH
Confidence 00112222 3677999999999999999999999999877775 568888643211 11122233344444
Q ss_pred HHHHcCC-CC-----cEEEccCCCCcCChHHHHHHHHccCcEEEeCCCCCCCcHHHHHHHHcCCc----EEEcCcccccc
Q 003962 608 LIDQYKL-NG-----QFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLP----TFATCKGGPAE 677 (783)
Q Consensus 608 li~~~~L-~~-----~V~flG~~~~~~~~~el~~~ia~aadvfV~PS~~E~fGltvlEAMa~GlP----VVat~~GG~~E 677 (783)
++.+.+. .+ .|.+++ ..++.+++..+|+. +|++|+||..||||++++||||||+| +|+|+.+|..+
T Consensus 321 lv~~in~~~~~~~~~pv~~l~---~~~~~~el~aly~a-aDv~vv~S~~EG~~Lv~lEamA~g~P~~g~vVlS~~~G~~~ 396 (456)
T TIGR02400 321 LVGRINGRFGTLDWTPIRYLN---RSYDREELMALYRA-ADVGLVTPLRDGMNLVAKEYVAAQDPKDGVLILSEFAGAAQ 396 (456)
T ss_pred HHHHHHhccCCCCCccEEEEc---CCCCHHHHHHHHHh-CcEEEECccccccCccHHHHHHhcCCCCceEEEeCCCCChH
Confidence 4332221 11 144544 26678999999995 99999999999999999999999999 99999999888
Q ss_pred ccccCceEEEECCCCHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHH
Q 003962 678 IIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEEKYTWKIYSQRLLTL 741 (783)
Q Consensus 678 iI~dg~~G~li~p~d~e~lAeaI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~~~a~~ll~l 741 (783)
.+. +|++++|.|++++|++|.++++ .+++.++++.+++++++ .+||+...++++++-
T Consensus 397 ~l~---~gllVnP~d~~~lA~aI~~aL~---~~~~er~~r~~~~~~~v-~~~~~~~W~~~~l~~ 453 (456)
T TIGR02400 397 ELN---GALLVNPYDIDGMADAIARALT---MPLEEREERHRAMMDKL-RKNDVQRWREDFLSD 453 (456)
T ss_pred HhC---CcEEECCCCHHHHHHHHHHHHc---CCHHHHHHHHHHHHHHH-hhCCHHHHHHHHHHH
Confidence 873 7999999999999999987763 47888999999999998 679999999998863
No 75
>PRK05749 3-deoxy-D-manno-octulosonic-acid transferase; Reviewed
Probab=99.92 E-value=6.1e-23 Score=232.63 Aligned_cols=285 Identities=15% Similarity=0.116 Sum_probs=192.7
Q ss_pred CCceEEEEcCCCchHHHHHHHHhcCCcEEEEecCCCccCCCCCchhhhhccccccccchhhHhHHhhhcCCEEEcCCHHH
Q 003962 382 GKPDLIIGNYSDGNIVASLLAHKLGVTQCTIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTFQE 461 (783)
Q Consensus 382 ~~pDIIh~h~~~~~lva~llar~lgvp~v~t~H~l~~~~~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~ 461 (783)
.+||+||++.++.-......+++.|+|++++-|.+... +...|+.+ ....+..++.+|.|++.|+..
T Consensus 123 ~~Pd~v~~~~~~~~~~~l~~~~~~~ip~vl~~~~~~~~----s~~~~~~~---------~~~~r~~~~~~d~ii~~S~~~ 189 (425)
T PRK05749 123 WRPKLVIIMETELWPNLIAELKRRGIPLVLANARLSER----SFKRYQKF---------KRFYRLLFKNIDLVLAQSEED 189 (425)
T ss_pred hCCCEEEEEecchhHHHHHHHHHCCCCEEEEeccCChh----hHHHHHHH---------HHHHHHHHHhCCEEEECCHHH
Confidence 36999998755432222334677899998876643211 11112111 012345688999999999988
Q ss_pred HhhccccccccccccccccccceeeeccCCCCCCcEEEecCCccCCCCCCCchHHHhhccCchhhHHhhcChhhhhhhhc
Q 003962 462 IAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEEKRRLKSFHPEIEELLYSDVENKEHLC 541 (783)
Q Consensus 462 ~~~~~~~v~qy~~~~~f~~p~l~~v~~gi~~~~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~~~~~l~~~~~~~~~~g 541 (783)
.+.+.+ .|++ .+ +.+++|+ +.+.+.+....... ...++.++
T Consensus 190 ~~~l~~--------------------~g~~--~~-i~vi~n~-~~d~~~~~~~~~~~---------------~~~r~~~~ 230 (425)
T PRK05749 190 AERFLA--------------------LGAK--NE-VTVTGNL-KFDIEVPPELAARA---------------ATLRRQLA 230 (425)
T ss_pred HHHHHH--------------------cCCC--CC-cEecccc-cccCCCChhhHHHH---------------HHHHHHhc
Confidence 763322 1333 44 7788874 33333222111110 01223333
Q ss_pred cccCCCCcEEEEEecccCCCCHHHHHHHHHHhHccCCCeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHHcCCCCcEEEc
Q 003962 542 VLKDRNKPILFTMARLDRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLNGQFRWI 621 (783)
Q Consensus 542 ll~~~~k~iIl~vGRL~~~Kgl~~LieA~~~l~~~~~~~~LvIVG~g~~~~~~~~ee~~~~~~l~~li~~~~L~~~V~fl 621 (783)
+++++++++|+. .|+.+.+++|+.++.+..|+++|+|+|+|+. ..++++++++++++. .+.|.
T Consensus 231 ----~~~~vil~~~~~--~~~~~~ll~A~~~l~~~~~~~~liivG~g~~----------r~~~l~~~~~~~gl~-~~~~~ 293 (425)
T PRK05749 231 ----PNRPVWIAASTH--EGEEELVLDAHRALLKQFPNLLLILVPRHPE----------RFKEVEELLKKAGLS-YVRRS 293 (425)
T ss_pred ----CCCcEEEEeCCC--chHHHHHHHHHHHHHHhCCCcEEEEcCCChh----------hHHHHHHHHHhCCCc-EEEcc
Confidence 356788888764 6889999999999888789999999999863 125678888888885 35555
Q ss_pred cCCCCc--------CChHHHHHHHHccCcEE-EeCCCCCCCcHHHHHHHHcCCcEEEcCc-cccccccccC-ceEEEECC
Q 003962 622 SSQMNR--------VRNGELYRYICDTKGAF-VQPALYEAFGLTVVEAMTCGLPTFATCK-GGPAEIIVNG-KSGYHIDP 690 (783)
Q Consensus 622 G~~~~~--------~~~~el~~~ia~aadvf-V~PS~~E~fGltvlEAMa~GlPVVat~~-GG~~EiI~dg-~~G~li~p 690 (783)
|..... -..+++..+|+. +|++ +.||..|++|.+++|||+||+|||+++. ++..|+++.. .+|+++.+
T Consensus 294 ~~~~~~~~~~v~l~~~~~el~~~y~~-aDi~~v~~S~~e~~g~~~lEAma~G~PVI~g~~~~~~~e~~~~~~~~g~~~~~ 372 (425)
T PRK05749 294 QGEPPSADTDVLLGDTMGELGLLYAI-ADIAFVGGSLVKRGGHNPLEPAAFGVPVISGPHTFNFKEIFERLLQAGAAIQV 372 (425)
T ss_pred CCCCCCCCCcEEEEecHHHHHHHHHh-CCEEEECCCcCCCCCCCHHHHHHhCCCEEECCCccCHHHHHHHHHHCCCeEEE
Confidence 421100 024689999985 9995 5578889999999999999999999854 6667766553 46888889
Q ss_pred CCHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Q 003962 691 YHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEEKYTWKIYSQRLLTLTG 743 (783)
Q Consensus 691 ~d~e~lAeaI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~~~a~~ll~ly~ 743 (783)
+|++++|++|..++ +||+.+++|+++|++.+.++ ...++++++++.
T Consensus 373 ~d~~~La~~l~~ll----~~~~~~~~m~~~a~~~~~~~---~~~~~~~~~~l~ 418 (425)
T PRK05749 373 EDAEDLAKAVTYLL----TDPDARQAYGEAGVAFLKQN---QGALQRTLQLLE 418 (425)
T ss_pred CCHHHHHHHHHHHh----cCHHHHHHHHHHHHHHHHhC---ccHHHHHHHHHH
Confidence 99999999997665 89999999999999999665 355666666654
No 76
>PF00534 Glycos_transf_1: Glycosyl transferases group 1; InterPro: IPR001296 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Proteins containign this domain transfer UDP, ADP, GDP or CMP linked sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides. The bacterial enzymes are involved in various biosynthetic processes that include exopolysaccharide biosynthesis, lipopolysaccharide core biosynthesis and the biosynthesis of the slime polysaccaride colanic acid. Mutations in this domain of the human N-acetylglucosaminyl-phosphatidylinositol biosynthetic protein are the cause of paroxysmal nocturnal hemoglobinuria (PNH), an acquired hemolytic blood disorder characterised by venous thrombosis, erythrocyte hemolysis, infections and defective hematopoiesis.; GO: 0009058 biosynthetic process; PDB: 2L7C_A 2IV3_B 2IUY_B 2XA9_A 2XA1_B 2X6R_A 2XMP_B 2XA2_B 2X6Q_A 3QHP_B ....
Probab=99.90 E-value=3.9e-23 Score=203.99 Aligned_cols=160 Identities=31% Similarity=0.501 Sum_probs=143.5
Q ss_pred CCCCcEEEEEecccCCCCHHHHHHHHHHhHcc-CCCeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHHcCCCCcEEEccC
Q 003962 545 DRNKPILFTMARLDRVKNLTGLVEWYGKNAKL-RELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISS 623 (783)
Q Consensus 545 ~~~k~iIl~vGRL~~~Kgl~~LieA~~~l~~~-~~~~~LvIVG~g~~~~~~~~ee~~~~~~l~~li~~~~L~~~V~flG~ 623 (783)
+.++++|+++||+++.||++.+++++..+.+. .+++.|+|+|.+. ....+...++.+++..++.|+|
T Consensus 12 ~~~~~~il~~g~~~~~K~~~~li~a~~~l~~~~~~~~~l~i~G~~~-----------~~~~~~~~~~~~~~~~~i~~~~- 79 (172)
T PF00534_consen 12 PDKKKIILFIGRLDPEKGIDLLIEAFKKLKEKKNPNYKLVIVGDGE-----------YKKELKNLIEKLNLKENIIFLG- 79 (172)
T ss_dssp -TTSEEEEEESESSGGGTHHHHHHHHHHHHHHHHTTEEEEEESHCC-----------HHHHHHHHHHHTTCGTTEEEEE-
T ss_pred CCCCeEEEEEecCccccCHHHHHHHHHHHHhhcCCCeEEEEEcccc-----------cccccccccccccccccccccc-
Confidence 67889999999999999999999999999864 7899999999663 3467888999999999999999
Q ss_pred CCCcCChHHHHHHHHccCcEEEeCCCCCCCcHHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHHHHHHHHHHH
Q 003962 624 QMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDF 703 (783)
Q Consensus 624 ~~~~~~~~el~~~ia~aadvfV~PS~~E~fGltvlEAMa~GlPVVat~~GG~~EiI~dg~~G~li~p~d~e~lAeaI~~~ 703 (783)
..+.+++..++.. +|++|+||..|+||++++|||+||+|||+|+.|+..|++.++.+|++++++|+++++++|..+
T Consensus 80 ---~~~~~~l~~~~~~-~di~v~~s~~e~~~~~~~Ea~~~g~pvI~~~~~~~~e~~~~~~~g~~~~~~~~~~l~~~i~~~ 155 (172)
T PF00534_consen 80 ---YVPDDELDELYKS-SDIFVSPSRNEGFGLSLLEAMACGCPVIASDIGGNNEIINDGVNGFLFDPNDIEELADAIEKL 155 (172)
T ss_dssp ---SHSHHHHHHHHHH-TSEEEE-BSSBSS-HHHHHHHHTT-EEEEESSTHHHHHSGTTTSEEEESTTSHHHHHHHHHHH
T ss_pred ---ccccccccccccc-ceeccccccccccccccccccccccceeeccccCCceeeccccceEEeCCCCHHHHHHHHHHH
Confidence 6667899999996 999999999999999999999999999999999999999999999999999999999999766
Q ss_pred HHHhhCCHHHHHHHHHHHHHH
Q 003962 704 FEKCKADPSYWDKISLGGLKR 724 (783)
Q Consensus 704 l~~l~~dp~~~~~ms~~a~~~ 724 (783)
+ .|++.++.|+++++++
T Consensus 156 l----~~~~~~~~l~~~~~~~ 172 (172)
T PF00534_consen 156 L----NDPELRQKLGKNARER 172 (172)
T ss_dssp H----HHHHHHHHHHHHHHHH
T ss_pred H----CCHHHHHHHHHHhcCC
Confidence 6 8999999999999875
No 77
>PRK13609 diacylglycerol glucosyltransferase; Provisional
Probab=99.90 E-value=4.8e-22 Score=221.88 Aligned_cols=263 Identities=12% Similarity=0.055 Sum_probs=179.4
Q ss_pred CCceEEEEcCCCchHHHHHHHHhcCCcEEEEecCCCccCCCCCchhhhhccccccccchhhHhHHhhhcCCEEEcCCHHH
Q 003962 382 GKPDLIIGNYSDGNIVASLLAHKLGVTQCTIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTFQE 461 (783)
Q Consensus 382 ~~pDIIh~h~~~~~lva~llar~lgvp~v~t~H~l~~~~~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~ 461 (783)
.+||+||++++..++.....++..++|++++.+++... ..+..+.+|.++++|+..
T Consensus 103 ~~pD~Vi~~~~~~~~~~~~~~~~~~ip~~~~~td~~~~------------------------~~~~~~~ad~i~~~s~~~ 158 (380)
T PRK13609 103 EKPDIVINTFPIIAVPELKKQTGISIPTYNVLTDFCLH------------------------KIWVHREVDRYFVATDHV 158 (380)
T ss_pred hCcCEEEEcChHHHHHHHHHhcCCCCCeEEEeCCCCCC------------------------cccccCCCCEEEECCHHH
Confidence 47999999877655444334445679987666543210 012466899999999877
Q ss_pred HhhccccccccccccccccccceeeeccCCCCCCcEEEecCCccCCCCCCCchHHHhhccCchhhHHhhcChhhhhhhhc
Q 003962 462 IAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEEKRRLKSFHPEIEELLYSDVENKEHLC 541 (783)
Q Consensus 462 ~~~~~~~v~qy~~~~~f~~p~l~~v~~gi~~~~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~~~~~l~~~~~~~~~~g 541 (783)
.+.+.+ .|++ .+|+.++++.++.. |.+.... ...++++|
T Consensus 159 ~~~l~~--------------------~gi~--~~ki~v~G~p~~~~-f~~~~~~------------------~~~~~~~~ 197 (380)
T PRK13609 159 KKVLVD--------------------IGVP--PEQVVETGIPIRSS-FELKINP------------------DIIYNKYQ 197 (380)
T ss_pred HHHHHH--------------------cCCC--hhHEEEECcccChH-HcCcCCH------------------HHHHHHcC
Confidence 653221 2444 67888876655432 2221111 11235567
Q ss_pred cccCCCCc-EEEEEecccCCCCHHHHHHHHHHhHccCCCeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHHcCCCCcEEE
Q 003962 542 VLKDRNKP-ILFTMARLDRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLNGQFRW 620 (783)
Q Consensus 542 ll~~~~k~-iIl~vGRL~~~Kgl~~LieA~~~l~~~~~~~~LvIVG~g~~~~~~~~ee~~~~~~l~~li~~~~L~~~V~f 620 (783)
+ +++++ ++++.|++...||+..+++++.+. ++++++++|++.. ...++++++++.++ ++|.|
T Consensus 198 l--~~~~~~il~~~G~~~~~k~~~~li~~l~~~----~~~~~viv~G~~~---------~~~~~l~~~~~~~~--~~v~~ 260 (380)
T PRK13609 198 L--CPNKKILLIMAGAHGVLGNVKELCQSLMSV----PDLQVVVVCGKNE---------ALKQSLEDLQETNP--DALKV 260 (380)
T ss_pred C--CCCCcEEEEEcCCCCCCcCHHHHHHHHhhC----CCcEEEEEeCCCH---------HHHHHHHHHHhcCC--CcEEE
Confidence 6 55555 455668888899999999987542 6789988866421 23456666666554 68999
Q ss_pred ccCCCCcCChHHHHHHHHccCcEEEeCCCCCCCcHHHHHHHHcCCcEEEcC-ccccc----cccccCceEEEECCCCHHH
Q 003962 621 ISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATC-KGGPA----EIIVNGKSGYHIDPYHGEQ 695 (783)
Q Consensus 621 lG~~~~~~~~~el~~~ia~aadvfV~PS~~E~fGltvlEAMa~GlPVVat~-~GG~~----EiI~dg~~G~li~p~d~e~ 695 (783)
+|++. ++..+|+ ++|++|. ++.|++++|||+||+|||+++ .+|.. +.+.+ +|+.+...|+++
T Consensus 261 ~g~~~------~~~~l~~-~aD~~v~----~~gg~t~~EA~a~g~PvI~~~~~~g~~~~n~~~~~~--~G~~~~~~~~~~ 327 (380)
T PRK13609 261 FGYVE------NIDELFR-VTSCMIT----KPGGITLSEAAALGVPVILYKPVPGQEKENAMYFER--KGAAVVIRDDEE 327 (380)
T ss_pred Eechh------hHHHHHH-hccEEEe----CCCchHHHHHHHhCCCEEECCCCCCcchHHHHHHHh--CCcEEEECCHHH
Confidence 99442 4667777 4999984 567999999999999999985 55531 23332 354445579999
Q ss_pred HHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Q 003962 696 AAEILVDFFEKCKADPSYWDKISLGGLKRIEEKYTWKIYSQRLLTLTGV 744 (783)
Q Consensus 696 lAeaI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~~~a~~ll~ly~~ 744 (783)
++++|.+++ +|++.+++|++++++.. ..++++.+++.+++++..
T Consensus 328 l~~~i~~ll----~~~~~~~~m~~~~~~~~-~~~s~~~i~~~i~~~~~~ 371 (380)
T PRK13609 328 VFAKTEALL----QDDMKLLQMKEAMKSLY-LPEPADHIVDDILAENHV 371 (380)
T ss_pred HHHHHHHHH----CCHHHHHHHHHHHHHhC-CCchHHHHHHHHHHhhhh
Confidence 999996665 89999999999998765 678999999999987643
No 78
>cd04950 GT1_like_1 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center
Probab=99.89 E-value=5.2e-21 Score=213.38 Aligned_cols=267 Identities=13% Similarity=0.065 Sum_probs=178.4
Q ss_pred cCCCceEEEEcCCCchHHHHHHHHhcCCcEEEEecCCCccCCCCCchhhhhccccccccchhhHhHHhhhcCCEEEcCCH
Q 003962 380 LQGKPDLIIGNYSDGNIVASLLAHKLGVTQCTIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTF 459 (783)
Q Consensus 380 l~~~pDIIh~h~~~~~lva~llar~lgvp~v~t~H~l~~~~~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~ 459 (783)
++.+.+|++++.+....++ +...+.++|+.+++..... +... .. ....+...++.||.|+|+|+
T Consensus 99 ~~~~~~i~~~~~P~~~~~~---~~~~~~~~Vyd~~D~~~~~-~~~~-------~~-----~~~~e~~~~~~ad~vi~~S~ 162 (373)
T cd04950 99 LGFGRPILWYYTPYTLPVA---ALLQASLVVYDCVDDLSAF-PGGP-------PE-----LLEAERRLLKRADLVFTTSP 162 (373)
T ss_pred cCCCCcEEEEeCccHHHHH---hhcCCCeEEEEcccchhcc-CCCC-------HH-----HHHHHHHHHHhCCEEEECCH
Confidence 4556667766655443333 3356788999998753322 1100 00 01346678999999999998
Q ss_pred HHHhhccccccccccccccccccceeeeccCCCCCCcEEEecCCccCCCCCCCchHHHhhccCchhhHHhhcChhhhhhh
Q 003962 460 QEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEEKRRLKSFHPEIEELLYSDVENKEH 539 (783)
Q Consensus 460 ~~~~~~~~~v~qy~~~~~f~~p~l~~v~~gi~~~~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~~~~~l~~~~~~~~~ 539 (783)
...+.+++. .+++.+||||+|.+.|.+........ +
T Consensus 163 ~l~~~~~~~-------------------------~~~i~~i~ngvd~~~f~~~~~~~~~~------------------~- 198 (373)
T cd04950 163 SLYEAKRRL-------------------------NPNVVLVPNGVDYEHFAAARDPPPPP------------------A- 198 (373)
T ss_pred HHHHHHhhC-------------------------CCCEEEcccccCHHHhhcccccCCCh------------------h-
Confidence 776522111 36889999999998886643221000 0
Q ss_pred hccccCCCCcEEEEEecccCCCCHHHHHHHHHHhHccCCCeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHHcCCCCcEE
Q 003962 540 LCVLKDRNKPILFTMARLDRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLNGQFR 619 (783)
Q Consensus 540 ~gll~~~~k~iIl~vGRL~~~Kgl~~LieA~~~l~~~~~~~~LvIVG~g~~~~~~~~ee~~~~~~l~~li~~~~L~~~V~ 619 (783)
. ....++++|+|+|++++.++++.+.+++. ..|+++|+|+|++.... .... ....+||.
T Consensus 199 ~--~~~~~~~~i~y~G~l~~~~d~~ll~~la~----~~p~~~~vliG~~~~~~-----------~~~~----~~~~~nV~ 257 (373)
T cd04950 199 D--LAALPRPVIGYYGAIAEWLDLELLEALAK----ARPDWSFVLIGPVDVSI-----------DPSA----LLRLPNVH 257 (373)
T ss_pred H--HhcCCCCEEEEEeccccccCHHHHHHHHH----HCCCCEEEEECCCcCcc-----------ChhH----hccCCCEE
Confidence 0 01346789999999999888876655543 35889999999983210 0111 11247899
Q ss_pred EccCCCCcCChHHHHHHHHccCcEEEeCCCC-----CCCcHHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHH
Q 003962 620 WISSQMNRVRNGELYRYICDTKGAFVQPALY-----EAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGE 694 (783)
Q Consensus 620 flG~~~~~~~~~el~~~ia~aadvfV~PS~~-----E~fGltvlEAMa~GlPVVat~~GG~~EiI~dg~~G~li~p~d~e 694 (783)
|+| .++.+++..+++. +|++++|+.. +++|++++||||||+|||+|+.++. +..+..+++ .++|++
T Consensus 258 ~~G----~~~~~~l~~~l~~-~Dv~l~P~~~~~~~~~~~P~Kl~EylA~G~PVVat~~~~~---~~~~~~~~~-~~~d~~ 328 (373)
T cd04950 258 YLG----PKPYKELPAYLAG-FDVAILPFRLNELTRATSPLKLFEYLAAGKPVVATPLPEV---RRYEDEVVL-IADDPE 328 (373)
T ss_pred EeC----CCCHHHHHHHHHh-CCEEecCCccchhhhcCCcchHHHHhccCCCEEecCcHHH---HhhcCcEEE-eCCCHH
Confidence 999 7788999999995 9999999863 4689999999999999999986654 444444444 456999
Q ss_pred HHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Q 003962 695 QAAEILVDFFEKCKADPSYWDKISLGGLKRIEEKYTWKIYSQRLLTLTG 743 (783)
Q Consensus 695 ~lAeaI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~~~a~~ll~ly~ 743 (783)
+++++|.+++. .+.....+ ++.+ +.+.|||+..++++++...
T Consensus 329 ~~~~ai~~~l~---~~~~~~~~---~~~~-~~~~~sW~~~a~~~~~~l~ 370 (373)
T cd04950 329 EFVAAIEKALL---EDGPARER---RRLR-LAAQNSWDARAAEMLEALQ 370 (373)
T ss_pred HHHHHHHHHHh---cCCchHHH---HHHH-HHHHCCHHHHHHHHHHHHH
Confidence 99999987652 23222211 2222 4588999999999996543
No 79
>PLN03063 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=99.88 E-value=2.7e-21 Score=233.09 Aligned_cols=323 Identities=13% Similarity=0.122 Sum_probs=214.5
Q ss_pred HHHHHHcCCCceEEEEcCCCchHHHHHHHHh-cCCcEEEEecCCCccCCCCCchhhhhccccccccchhhHhHHhhhcCC
Q 003962 374 VEIAKELQGKPDLIIGNYSDGNIVASLLAHK-LGVTQCTIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTD 452 (783)
Q Consensus 374 ~~l~~~l~~~pDIIh~h~~~~~lva~llar~-lgvp~v~t~H~l~~~~~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~AD 452 (783)
..+....+ .-|+|-.|.....+++.++.++ ...++.+..|..++ .+.++. .+ + +-..-+..|-.||
T Consensus 139 ~~i~~~~~-~~d~vWvhDYhL~llp~~lR~~~~~~~igfFlHiPFP----s~e~fr-~l-p------~r~~il~gll~aD 205 (797)
T PLN03063 139 DVVKENYE-EGDVVWCHDYHLMFLPQYLKEYNNKMKVGWFLHTPFP----SSEIYK-TL-P------SRSELLRAVLTAD 205 (797)
T ss_pred HHHHHhcC-CCCEEEEecchhhhHHHHHHHhCCCCcEEEEecCCCC----CHHHHh-hC-C------CHHHHHHHHhcCC
Confidence 34444433 3489999998887777777765 46788899997533 333221 11 0 1112234778999
Q ss_pred EEEcCCHHHHhhccccccccccccccccccceeeeccCCCCCCcEEEecCCccCCCCCCCchHHHhhccCchhhHHhhcC
Q 003962 453 FIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEEKRRLKSFHPEIEELLYS 532 (783)
Q Consensus 453 ~IIt~S~~~~~~~~~~v~qy~~~~~f~~p~l~~v~~gi~~~~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~~~~~l~~ 532 (783)
.|-..|+..+..+.+......... .+..++ ..+|- ..++.++|||||.+.|.+.......... .
T Consensus 206 ligF~t~~y~r~Fl~~~~r~l~~~-~~~~~i--~~~gr---~~~I~viP~GID~~~f~~~~~~~~~~~~----~------ 269 (797)
T PLN03063 206 LIGFHTYDFARHFLSACTRILGVE-GTHEGV--VDQGK---VTRVAVFPIGIDPERFINTCELPEVKQH----M------ 269 (797)
T ss_pred EEEeCCHHHHHHHHHHHHHHhCcc-ccCCce--EECCe---EEEEEEEecccCHHHHHHHhcChhHHHH----H------
Confidence 999999887765444322111000 000000 01111 2468899999999887653221100000 0
Q ss_pred hhhhhhhhccccCCCCcEEEEEecccCCCCHHHHHHHHHHhHccCCCeE----EEEEeCCCCCCCccHHHHHHHHHHHHH
Q 003962 533 DVENKEHLCVLKDRNKPILFTMARLDRVKNLTGLVEWYGKNAKLRELVN----LVVVGGDRRKESKDLEEQAEMKKMYSL 608 (783)
Q Consensus 533 ~~~~~~~~gll~~~~k~iIl~vGRL~~~Kgl~~LieA~~~l~~~~~~~~----LvIVG~g~~~~~~~~ee~~~~~~l~~l 608 (783)
...++. ..++++|+++||+++.||+..+++|++++.+.+|+++ |+.++.. .+ +.. .+.+++++.
T Consensus 270 -~~lr~~-----~~~~~lIl~VgRLd~~KGi~~lL~Afe~lL~~~P~~~~kvvLvqia~p-sr-~~~----~~y~~l~~~ 337 (797)
T PLN03063 270 -KELKRF-----FAGRKVILGVDRLDMIKGIPQKYLAFEKFLEENPEWRDKVMLVQIAVP-TR-NDV----PEYQKLKSQ 337 (797)
T ss_pred -HHHHHh-----cCCCeEEEEecccccccCHHHHHHHHHHHHHhCccccCcEEEEEEecC-CC-Cch----HHHHHHHHH
Confidence 001111 2357899999999999999999999999988888753 5544432 21 111 122334444
Q ss_pred HHHcC--CC---CcEEEccC--CCCcCChHHHHHHHHccCcEEEeCCCCCCCcHHHHHHHHcCCc----EEEcCcccccc
Q 003962 609 IDQYK--LN---GQFRWISS--QMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLP----TFATCKGGPAE 677 (783)
Q Consensus 609 i~~~~--L~---~~V~flG~--~~~~~~~~el~~~ia~aadvfV~PS~~E~fGltvlEAMa~GlP----VVat~~GG~~E 677 (783)
++++. ++ +.+.|.+. ....++.+++..+|+ +||+||+||..||||++++||||||+| +|+|..+|.++
T Consensus 338 v~~l~g~In~~~g~~~~~pv~~l~~~v~~~el~aly~-~ADvfvvtSlrEGmnLv~lEamA~g~p~~gvlVlSe~~G~~~ 416 (797)
T PLN03063 338 VHELVGRINGRFGSVSSVPIHHLDCSVDFNYLCALYA-ITDVMLVTSLRDGMNLVSYEFVACQKAKKGVLVLSEFAGAGQ 416 (797)
T ss_pred HHHHHHHhhcccccCCCceeEEecCCCCHHHHHHHHH-hCCEEEeCccccccCcchhhHheeecCCCCCEEeeCCcCchh
Confidence 44332 21 22233321 112678899999999 499999999999999999999999999 99999999999
Q ss_pred ccccCceEEEECCCCHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Q 003962 678 IIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEEKYTWKIYSQRLLTLTGV 744 (783)
Q Consensus 678 iI~dg~~G~li~p~d~e~lAeaI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~~~a~~ll~ly~~ 744 (783)
.+ +.+|++++|.|++++|++|.++++ .+++.+++..+++++++ .++||...++.+++-+..
T Consensus 417 ~l--~~~allVnP~D~~~lA~AI~~aL~---m~~~er~~r~~~~~~~v-~~~~~~~Wa~~fl~~l~~ 477 (797)
T PLN03063 417 SL--GAGALLVNPWNITEVSSAIKEALN---MSDEERETRHRHNFQYV-KTHSAQKWADDFMSELND 477 (797)
T ss_pred hh--cCCeEEECCCCHHHHHHHHHHHHh---CCHHHHHHHHHHHHHhh-hhCCHHHHHHHHHHHHHH
Confidence 76 557999999999999999987773 48888999999999988 889999999999886654
No 80
>PLN02605 monogalactosyldiacylglycerol synthase
Probab=99.87 E-value=1.6e-20 Score=210.18 Aligned_cols=263 Identities=15% Similarity=0.128 Sum_probs=183.1
Q ss_pred CCceEEEEcCCCc-hHHHHHHHH-----hcCCcEEEEecCCCccCCCCCchhhhhccccccccchhhHhHHhhhcCCEEE
Q 003962 382 GKPDLIIGNYSDG-NIVASLLAH-----KLGVTQCTIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFII 455 (783)
Q Consensus 382 ~~pDIIh~h~~~~-~lva~llar-----~lgvp~v~t~H~l~~~~~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~AD~II 455 (783)
.+||+||++++.. ...+..+++ ..++|++++++++.... ..+..+.+|.++
T Consensus 99 ~~pDvIi~thp~~~~~~~~~l~~~~~~~~~~~p~~~~~tD~~~~~-----------------------~~w~~~~~d~~~ 155 (382)
T PLN02605 99 YKPDIIVSVHPLMQHVPLRVLRWQGKELGKKIPFTTVVTDLGTCH-----------------------PTWFHKGVTRCF 155 (382)
T ss_pred cCcCEEEEeCcCcccCHHHHHHHHhhccCCCCCEEEEECCCCCcC-----------------------cccccCCCCEEE
Confidence 4799999976543 222223332 24789888777642100 012467999999
Q ss_pred cCCHHHHhhccccccccccccccccccceeeeccCCCCCCcEEEecCCccCCCCCCCchHHHhhccCchhhHHhhcChhh
Q 003962 456 TSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEEKRRLKSFHPEIEELLYSDVE 535 (783)
Q Consensus 456 t~S~~~~~~~~~~v~qy~~~~~f~~p~l~~v~~gi~~~~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~~~~~l~~~~~ 535 (783)
++|+...+.+. ..|++ .+|+.++++++|.+.+.+.... ..
T Consensus 156 ~~s~~~~~~l~--------------------~~g~~--~~ki~v~g~~v~~~f~~~~~~~------------------~~ 195 (382)
T PLN02605 156 CPSEEVAKRAL--------------------KRGLE--PSQIRVYGLPIRPSFARAVRPK------------------DE 195 (382)
T ss_pred ECCHHHHHHHH--------------------HcCCC--HHHEEEECcccCHhhccCCCCH------------------HH
Confidence 99987765322 12444 7899999999987544332211 12
Q ss_pred hhhhhccccCCCCcEEEEEecccCCCCHHHHHHHHHHhHc----cCCCeE-EEEEeCCCCCCCccHHHHHHHHHHHHHHH
Q 003962 536 NKEHLCVLKDRNKPILFTMARLDRVKNLTGLVEWYGKNAK----LRELVN-LVVVGGDRRKESKDLEEQAEMKKMYSLID 610 (783)
Q Consensus 536 ~~~~~gll~~~~k~iIl~vGRL~~~Kgl~~LieA~~~l~~----~~~~~~-LvIVG~g~~~~~~~~ee~~~~~~l~~li~ 610 (783)
.++.+|+ ++++++|+++|+....|++..+++++..... ..++.+ ++++|++. ...+++++.
T Consensus 196 ~r~~~gl--~~~~~~il~~Gg~~g~~~~~~li~~l~~~~~~~~~~~~~~~~~vi~G~~~----------~~~~~L~~~-- 261 (382)
T PLN02605 196 LRRELGM--DEDLPAVLLMGGGEGMGPLEETARALGDSLYDKNLGKPIGQVVVICGRNK----------KLQSKLESR-- 261 (382)
T ss_pred HHHHcCC--CCCCcEEEEECCCcccccHHHHHHHHHHhhccccccCCCceEEEEECCCH----------HHHHHHHhh--
Confidence 3466788 7788999999999999999999999976531 135565 56666552 112233322
Q ss_pred HcCCCCcEEEccCCCCcCChHHHHHHHHccCcEEEeCCCCCCCcHHHHHHHHcCCcEEEcCc------cccccccccCce
Q 003962 611 QYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCK------GGPAEIIVNGKS 684 (783)
Q Consensus 611 ~~~L~~~V~flG~~~~~~~~~el~~~ia~aadvfV~PS~~E~fGltvlEAMa~GlPVVat~~------GG~~EiI~dg~~ 684 (783)
....+|+|+|++. ++..+|+ ++|++|.++ .|+|++|||+||+|+|+++. |+.. .+.++..
T Consensus 262 --~~~~~v~~~G~~~------~~~~l~~-aaDv~V~~~----g~~ti~EAma~g~PvI~~~~~pgqe~gn~~-~i~~~g~ 327 (382)
T PLN02605 262 --DWKIPVKVRGFVT------NMEEWMG-ACDCIITKA----GPGTIAEALIRGLPIILNGYIPGQEEGNVP-YVVDNGF 327 (382)
T ss_pred --cccCCeEEEeccc------cHHHHHH-hCCEEEECC----CcchHHHHHHcCCCEEEecCCCccchhhHH-HHHhCCc
Confidence 2245799999543 5788888 599999865 48999999999999999983 4443 3444556
Q ss_pred EEEECCCCHHHHHHHHHHHHHHhhCC-HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Q 003962 685 GYHIDPYHGEQAAEILVDFFEKCKAD-PSYWDKISLGGLKRIEEKYTWKIYSQRLLTLT 742 (783)
Q Consensus 685 G~li~p~d~e~lAeaI~~~l~~l~~d-p~~~~~ms~~a~~~v~~~ysw~~~a~~ll~ly 742 (783)
|+.+ .|+++++++|.+++ .| ++.+++|++++++.+ ...+++.+++.+.++.
T Consensus 328 g~~~--~~~~~la~~i~~ll----~~~~~~~~~m~~~~~~~~-~~~a~~~i~~~l~~~~ 379 (382)
T PLN02605 328 GAFS--ESPKEIARIVAEWF----GDKSDELEAMSENALKLA-RPEAVFDIVHDLHELV 379 (382)
T ss_pred eeec--CCHHHHHHHHHHHH----cCCHHHHHHHHHHHHHhc-CCchHHHHHHHHHHHh
Confidence 7754 69999999997766 66 999999999999987 7788899998887653
No 81
>TIGR02094 more_P_ylases alpha-glucan phosphorylases. This family consists of known phosphorylases, and homologs believed to share the function of using inorganic phosphate to cleave an alpha 1,4 linkage between the terminal glucose residue and the rest of the polymer (maltodextrin, glycogen, etc.). The name of the glucose storage polymer substrate, and therefore the name of this enzyme, depends on the chain lengths and branching patterns. A number of the members of this family have been shown to operate on small maltodextrins, as may be obtained by utilization of exogenous sources. This family represents a distinct clade from the related family modeled by TIGR02093/PF00343.
Probab=99.87 E-value=3.7e-20 Score=216.06 Aligned_cols=349 Identities=13% Similarity=0.134 Sum_probs=243.9
Q ss_pred HHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHh--------------cCCcEEEEecCCCccC---CCCCch-------
Q 003962 371 DVAVEIAKELQGKPDLIIGNYSDGNIVASLLAHK--------------LGVTQCTIAHALEKTK---YPDSDI------- 426 (783)
Q Consensus 371 ~~~~~l~~~l~~~pDIIh~h~~~~~lva~llar~--------------lgvp~v~t~H~l~~~~---~~~s~~------- 426 (783)
.+.-+.++.++.+||+||+|.+.++++...+.+. .+.+.++|.|++.... ++...+
T Consensus 149 ~a~l~~l~~l~~~pdviH~ND~Htal~~~el~r~l~~~~~~~~~a~~~~~~~~vfTiHt~~~qG~e~f~~~~~~~~~~~~ 228 (601)
T TIGR02094 149 IGGVRALRALGIDPDVYHLNEGHAAFVTLERIRELIAQGLSFEEAWEAVRKSSLFTTHTPVPAGHDVFPEDLMRKYFGDY 228 (601)
T ss_pred HHHHHHHHHcCCCceEEEeCCchHHHHHHHHHHHHHHcCCCHHHHHHhcCCeEEEeCCCchHHHhhhcCHHHHHHHhhhh
Confidence 3333444556679999999999998877665332 1366899999976654 221111
Q ss_pred ------hhhhcc---ccc-cccchhhHhHHhhhcCCEEEcCCHHHHhhccccccccccccccccccceeeeccCCCCCCc
Q 003962 427 ------YWKNLD---DKY-HFSCQFTADLIAMNHTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPK 496 (783)
Q Consensus 427 ------~~~~~~---~~y-~f~~~~~~e~~a~~~AD~IIt~S~~~~~~~~~~v~qy~~~~~f~~p~l~~v~~gi~~~~~k 496 (783)
.+..+. ..+ ....++..-+.++..||.|.++|+...+-.++..+.+ + ...+....+
T Consensus 229 ~~~~gl~~~~~~~~~~~~~~~~~~vnm~~lai~~S~~vngVS~lh~~v~~~l~~~l-----------~---~~~~~~~~~ 294 (601)
T TIGR02094 229 AANLGLPREQLLALGRENPDDPEPFNMTVLALRLSRIANGVSKLHGEVSRKMWQFL-----------Y---PGYEEEEVP 294 (601)
T ss_pred hhHhCCCHHHHHhhhhhccCccCceeHHHHHHHhCCeeeeecHHHHHHHHHHHHhh-----------h---hhcccccCC
Confidence 111000 000 0012345566789999999999987665322221110 0 011111335
Q ss_pred EEEecCCccCCCCCCCchHHHhhccCchh---------------------h-HHhhcChhhhhh----------------
Q 003962 497 FNIVSPGADMSIYFPYTEEKRRLKSFHPE---------------------I-EELLYSDVENKE---------------- 538 (783)
Q Consensus 497 ~~VIpnGvD~~~f~p~~~~~~r~~~~~~~---------------------~-~~~l~~~~~~~~---------------- 538 (783)
+.-|-||||...+.|.+...-......+. + +.+.-++..+.+
T Consensus 295 i~gItNGId~~~W~~~~~~~l~~~y~~~~w~~~~~~~~~~~~~~~~~~~~l~~~K~~~K~~L~~~v~~~~~~~~~~~g~~ 374 (601)
T TIGR02094 295 IGYVTNGVHNPTWVAPELRDLYERYLGENWRELLADEELWEAIDDIPDEELWEVHLKLKARLIDYIRRRLRERWLRRGAD 374 (601)
T ss_pred ccceeCCccccccCCHHHHHHHHHhCCcchhccchhhhhhhhcccccHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccCc
Confidence 88899999999998765433211111111 1 233333333333
Q ss_pred -----hhccccCCCCcEEEEEecccCCCCHHHHHHHHHHhHccC----CCeEEEEEeCCCCCCCccHHHHHHHHHHHHHH
Q 003962 539 -----HLCVLKDRNKPILFTMARLDRVKNLTGLVEWYGKNAKLR----ELVNLVVVGGDRRKESKDLEEQAEMKKMYSLI 609 (783)
Q Consensus 539 -----~~gll~~~~k~iIl~vGRL~~~Kgl~~LieA~~~l~~~~----~~~~LvIVG~g~~~~~~~~ee~~~~~~l~~li 609 (783)
.+|+..+++.+++++++|+..+||++++++++.++.+.- .++++|+.|.+... |...++.++.+..++
T Consensus 375 ~~~~~~~gl~~dpd~~~ig~v~Rl~~yKr~dLil~~i~~l~~i~~~~~~pvq~V~~Gka~p~---d~~gk~~i~~i~~la 451 (601)
T TIGR02094 375 AAILMATDRFLDPDVLTIGFARRFATYKRADLIFRDLERLARILNNPERPVQIVFAGKAHPA---DGEGKEIIQRIVEFS 451 (601)
T ss_pred chhhhhhccccCCCCcEEEEEEcchhhhhHHHHHHHHHHHHHHhhCCCCCeEEEEEEecCcc---cchHHHHHHHHHHHH
Confidence 355556788999999999999999999999988886421 36999999998652 445556778888888
Q ss_pred HHcCCCCcEEEccCCCCcCChHHHHHHHHccCcEEEe-CCC-CCCCcHHHHHHHHcCCcEEEcCccccccccccCceEEE
Q 003962 610 DQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQ-PAL-YEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYH 687 (783)
Q Consensus 610 ~~~~L~~~V~flG~~~~~~~~~el~~~ia~aadvfV~-PS~-~E~fGltvlEAMa~GlPVVat~~GG~~EiI~dg~~G~l 687 (783)
++....++|.|+- --+..+.+.|-.++|++++ ||. +|++|++-+=||..|.+.+++..|...|.. ++.|||.
T Consensus 452 ~~~~~~~kv~f~~-----~Yd~~lA~~i~aG~Dv~L~~Psr~~EacGtsqMka~~nGgL~~sv~DG~~~E~~-~~~nGf~ 525 (601)
T TIGR02094 452 KRPEFRGRIVFLE-----NYDINLARYLVSGVDVWLNNPRRPLEASGTSGMKAAMNGVLNLSILDGWWGEGY-DGDNGWA 525 (601)
T ss_pred hcccCCCCEEEEc-----CCCHHHHHHHhhhheeEEeCCCCCcCCchHHHHHHHHcCCceeecccCcccccC-CCCcEEE
Confidence 8755678999985 2456777777778999999 999 999999999999999999999999988887 6779999
Q ss_pred ECC------------CCHHHHHHHHHHHH-HHhhCC-----HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Q 003962 688 IDP------------YHGEQAAEILVDFF-EKCKAD-----PSYWDKISLGGLKRIEEKYTWKIYSQRLLTLT 742 (783)
Q Consensus 688 i~p------------~d~e~lAeaI~~~l-~~l~~d-----p~~~~~ms~~a~~~v~~~ysw~~~a~~ll~ly 742 (783)
|.+ .|++++-++|.+.+ ....++ |..|.+|.++|.+.....|||++++++|.++|
T Consensus 526 f~~~~~~~~~~~~d~~da~~l~~~L~~ai~~~yy~~~~~~~p~~W~~~~k~am~~~~~~fsw~r~a~~Y~~~y 598 (601)
T TIGR02094 526 IGDGEEYDDEEEQDRLDAEALYDLLENEVIPLYYDRDEKGIPADWVEMMKESIATIAPRFSTNRMVREYVDKF 598 (601)
T ss_pred ECCCccccccccccCCCHHHHHHHHHHHHHHHHhcCCcccCcHHHHHHHHHHHhccCCCCCHHHHHHHHHHHh
Confidence 984 79999999997766 333343 66799999999988767899999999999987
No 82
>PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional
Probab=99.86 E-value=1.7e-20 Score=226.04 Aligned_cols=322 Identities=15% Similarity=0.119 Sum_probs=213.2
Q ss_pred HHHHHHcCCCceEEEEcCCCchHHHHHHHHhc-CCcEEEEecCCCccCCCCCchhhhhccccccccchhhHhHHhhhcCC
Q 003962 374 VEIAKELQGKPDLIIGNYSDGNIVASLLAHKL-GVTQCTIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTD 452 (783)
Q Consensus 374 ~~l~~~l~~~pDIIh~h~~~~~lva~llar~l-gvp~v~t~H~l~~~~~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~AD 452 (783)
..+....+ .-|+|..|.....+++.++.++. ..++.+..|...+ .+.+... + + ....-...|-.+|
T Consensus 125 ~~~~~~~~-~~d~vwvhDYhl~l~p~~lr~~~~~~~igfFlH~pfP----~~~~f~~-l-p------~~~~ll~~ll~~D 191 (726)
T PRK14501 125 EAIAAIAR-PGDVVWVHDYQLMLLPAMLRERLPDARIGFFLHIPFP----SFEVFRL-L-P------WREEILEGLLGAD 191 (726)
T ss_pred HHHHHhcC-CCCEEEEeCchhhhHHHHHHhhCCCCcEEEEeeCCCC----ChHHHhh-C-C------ChHHHHHHHhcCC
Confidence 33444333 45899999998878888887653 5788889997533 2332221 1 1 1122245788999
Q ss_pred EEEcCCHHHHhhccccccccccccccccccceeeeccCCCCCCcEEEecCCccCCCCCCCchHHHhhccCchhhHHhhcC
Q 003962 453 FIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEEKRRLKSFHPEIEELLYS 532 (783)
Q Consensus 453 ~IIt~S~~~~~~~~~~v~qy~~~~~f~~p~l~~v~~gi~~~~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~~~~~l~~ 532 (783)
.|-..|......+.+.+....... +..+ .....|- ..++.++|||||.+.|.+......... ..
T Consensus 192 ligf~t~~~~r~Fl~~~~~~l~~~--~~~~-~~~~~gr---~~~v~v~p~GID~~~f~~~~~~~~~~~----~~------ 255 (726)
T PRK14501 192 LIGFHTYDYVRHFLSSVLRVLGYE--TELG-EIRLGGR---IVRVDAFPMGIDYDKFHNSAQDPEVQE----EI------ 255 (726)
T ss_pred eEEeCCHHHHHHHHHHHHHHcCCc--cCCC-eEEECCE---EEEEEEEECeEcHHHHHHHhcCchHHH----HH------
Confidence 999999876665444322211000 0000 0011111 235789999999998876432111000 00
Q ss_pred hhhhhhhhccccCCCCcEEEEEecccCCCCHHHHHHHHHHhHccCCC----eEEEEEeCCCCCCCccHHHHHHHHHHHHH
Q 003962 533 DVENKEHLCVLKDRNKPILFTMARLDRVKNLTGLVEWYGKNAKLREL----VNLVVVGGDRRKESKDLEEQAEMKKMYSL 608 (783)
Q Consensus 533 ~~~~~~~~gll~~~~k~iIl~vGRL~~~Kgl~~LieA~~~l~~~~~~----~~LvIVG~g~~~~~~~~ee~~~~~~l~~l 608 (783)
...++. ..++++|+++||+++.||+..+++|++++.+.+|+ ++|+++|.+.... ..+..+..+++.++
T Consensus 256 -~~lr~~-----~~~~~~il~VgRl~~~Kgi~~~l~A~~~ll~~~p~~~~~v~lv~v~~~sr~~--~~~~~~l~~~~~~~ 327 (726)
T PRK14501 256 -RRLRQD-----LRGRKIILSIDRLDYTKGIPRRLLAFERFLEKNPEWRGKVRLVQVAVPSRTG--VPQYQEMKREIDEL 327 (726)
T ss_pred -HHHHHH-----cCCCEEEEEecCcccccCHHHHHHHHHHHHHhCccccCCEEEEEEecCCCcc--hHHHHHHHHHHHHH
Confidence 001111 24677999999999999999999999999887775 6899998542210 12223444555555
Q ss_pred HHHcCC-------CCcEEEccCCCCcCChHHHHHHHHccCcEEEeCCCCCCCcHHHHHHHHc-----CCcEEEcCccccc
Q 003962 609 IDQYKL-------NGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTC-----GLPTFATCKGGPA 676 (783)
Q Consensus 609 i~~~~L-------~~~V~flG~~~~~~~~~el~~~ia~aadvfV~PS~~E~fGltvlEAMa~-----GlPVVat~~GG~~ 676 (783)
+.+.+. .+-+.+.| .++.+++..+|+. +|+||+||..||||++++|||+| |.||++...|+..
T Consensus 328 v~~in~~~~~~~~~pv~~~~~----~~~~~~l~~ly~~-aDv~v~~S~~EG~~lv~~Eama~~~~~~g~~vls~~~G~~~ 402 (726)
T PRK14501 328 VGRINGEFGTVDWTPIHYFYR----SLPFEELVALYRA-ADVALVTPLRDGMNLVAKEYVASRTDGDGVLILSEMAGAAA 402 (726)
T ss_pred HHHHHhhcCCCCcceEEEEeC----CCCHHHHHHHHHh-ccEEEecccccccCcccceEEEEcCCCCceEEEecccchhH
Confidence 544331 12234556 6788999999995 99999999999999999999999 5577777788888
Q ss_pred cccccCceEEEECCCCHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHh
Q 003962 677 EIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEEKYTWKIYSQRLLTLTGVY 745 (783)
Q Consensus 677 EiI~dg~~G~li~p~d~e~lAeaI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~~~a~~ll~ly~~~ 745 (783)
+++ .|++++|.|++++|++|.+++. .+++.+.+..+++++++ .+|||+.+++++++.|...
T Consensus 403 ~l~----~~llv~P~d~~~la~ai~~~l~---~~~~e~~~r~~~~~~~v-~~~~~~~w~~~~l~~l~~~ 463 (726)
T PRK14501 403 ELA----EALLVNPNDIEGIAAAIKRALE---MPEEEQRERMQAMQERL-RRYDVHKWASDFLDELREA 463 (726)
T ss_pred HhC----cCeEECCCCHHHHHHHHHHHHc---CCHHHHHHHHHHHHHHH-HhCCHHHHHHHHHHHHHHH
Confidence 875 4899999999999999987762 23445555556788888 7899999999999987653
No 83
>cd01635 Glycosyltransferase_GTB_type Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. The structures of the formed glycoconjugates are extremely diverse, reflecting a wide range of biological functions. The members of this family share a common GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=99.86 E-value=5.2e-20 Score=186.60 Aligned_cols=121 Identities=31% Similarity=0.519 Sum_probs=103.4
Q ss_pred EEecccCCCCHHHHHHHHHHhHccCCCeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHHcCCCCcEEEccCCCCcCChHH
Q 003962 553 TMARLDRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGE 632 (783)
Q Consensus 553 ~vGRL~~~Kgl~~LieA~~~l~~~~~~~~LvIVG~g~~~~~~~~ee~~~~~~l~~li~~~~L~~~V~flG~~~~~~~~~e 632 (783)
|+|++.+.||++.+++++..+.+..++++++++|++.+. ......+..++..++|.++| .++..+
T Consensus 109 ~~g~~~~~k~~~~~~~a~~~l~~~~~~~~~~i~G~~~~~-----------~~~~~~~~~~~~~~~v~~~~----~~~~~~ 173 (229)
T cd01635 109 FVGRLAPEKGLDDLIEAFALLKERGPDLKLVIAGDGPER-----------EYLEELLAALLLLDRVIFLG----GLDPEE 173 (229)
T ss_pred EEEeecccCCHHHHHHHHHHHHHhCCCeEEEEEeCCCCh-----------HHHHHHHHhcCCcccEEEeC----CCCcHH
Confidence 999999999999999999999988889999999998652 23333366777889999999 443445
Q ss_pred HHHHHHccCcEEEeCCCCCCCcHHHHHHHHcCCcEEEcCccccccccccCceEEEE
Q 003962 633 LYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHI 688 (783)
Q Consensus 633 l~~~ia~aadvfV~PS~~E~fGltvlEAMa~GlPVVat~~GG~~EiI~dg~~G~li 688 (783)
....+.+.+|+++.|+..|++|++++|||+||+|+|+|+.++..|++.++.+|+++
T Consensus 174 ~~~~~~~~~di~l~~~~~e~~~~~~~Eam~~g~pvi~s~~~~~~e~i~~~~~g~~~ 229 (229)
T cd01635 174 LLALLLAAADVFVLPSLREGFGLVVLEAMACGLPVIATDVGGPPEIVEDGLTGLLV 229 (229)
T ss_pred HHHHHhhcCCEEEecccccCcChHHHHHHhCCCCEEEcCCCCcceEEECCCceEEC
Confidence 55555545999999999999999999999999999999999999999999999874
No 84
>COG0438 RfaG Glycosyltransferase [Cell envelope biogenesis, outer membrane]
Probab=99.84 E-value=5.1e-19 Score=187.19 Aligned_cols=291 Identities=23% Similarity=0.318 Sum_probs=209.4
Q ss_pred ceEEEEcCCCchH---HHHHHHHhcCCcEEEEecCCCccCCCCCchhhhhccccccccchhhHhHHhhhcCCEEEcCCHH
Q 003962 384 PDLIIGNYSDGNI---VASLLAHKLGVTQCTIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTFQ 460 (783)
Q Consensus 384 pDIIh~h~~~~~l---va~llar~lgvp~v~t~H~l~~~~~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~ 460 (783)
+|++|.+...... .........+.+.+...|....................+. .........+..+.+++.+..
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~ 160 (381)
T COG0438 84 YDIIHAHSLLLAPGGLLALLLLKLLGIPLVVTLHGLIPRILLLPRLLLLLGLLRLL---LKRLKKALRLLADRVIAVSPA 160 (381)
T ss_pred cceeeccccccccchhHHHhhccccCCcEEEeecCCcccccccccchhhHHHHHHH---HHHHHHhccccccEEEECCHH
Confidence 5999977665432 3455555677888888888644322111111000000000 000011112247888888865
Q ss_pred HHhhccccccccccccccccccceeeeccCCCCCCcEEEecCCccCCCCCCCchHHHhhccCchhhHHhhcChhhhhhhh
Q 003962 461 EIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEEKRRLKSFHPEIEELLYSDVENKEHL 540 (783)
Q Consensus 461 ~~~~~~~~v~qy~~~~~f~~p~l~~v~~gi~~~~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~~~~~l~~~~~~~~~~ 540 (783)
.....+.. .. ..++.+++|+++.+.+.+.. .
T Consensus 161 ~~~~~~~~--------------------~~---~~~~~~~~~~~~~~~~~~~~--------------------------~ 191 (381)
T COG0438 161 LKELLEAL--------------------GV---PNKIVVIPNGIDTEKFAPAR--------------------------I 191 (381)
T ss_pred HHHHHHHh--------------------CC---CCCceEecCCcCHHHcCccc--------------------------c
Confidence 42211111 01 23788999999988776540 1
Q ss_pred ccccCCCCcEEEEEecccCCCCHHHHHHHHHHhHccCCCeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHHcCCCCcEEE
Q 003962 541 CVLKDRNKPILFTMARLDRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLNGQFRW 620 (783)
Q Consensus 541 gll~~~~k~iIl~vGRL~~~Kgl~~LieA~~~l~~~~~~~~LvIVG~g~~~~~~~~ee~~~~~~l~~li~~~~L~~~V~f 620 (783)
++..+.....++++||+.+.||++.+++++..+.+..+++.++++|.+... .+.+..++.+++..++|.|
T Consensus 192 ~~~~~~~~~~i~~~g~~~~~k~~~~~i~~~~~~~~~~~~~~~~~~g~~~~~----------~~~~~~~~~~~~~~~~v~~ 261 (381)
T COG0438 192 GLLPEGGKFVVLYVGRLDPEKGLDLLIEAAAKLKKRGPDIKLVIVGDGPER----------REELEKLAKKLGLEDNVKF 261 (381)
T ss_pred CCCcccCceEEEEeeccChhcCHHHHHHHHHHhhhhcCCeEEEEEcCCCcc----------HHHHHHHHHHhCCCCcEEE
Confidence 111011147899999999999999999999999987777999999999651 2455568888888889999
Q ss_pred ccCCCCcCChHHHHHHHHccCcEEEeCCCCCCCcHHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHHHHHHHH
Q 003962 621 ISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEIL 700 (783)
Q Consensus 621 lG~~~~~~~~~el~~~ia~aadvfV~PS~~E~fGltvlEAMa~GlPVVat~~GG~~EiI~dg~~G~li~p~d~e~lAeaI 700 (783)
+| .++.+++..+++. +|++++||.+|+||++++|||+||+|||+++.++..|++.++.+|+++++.|.+++++++
T Consensus 262 ~g----~~~~~~~~~~~~~-~~~~v~ps~~e~~~~~~~Ea~a~g~pvi~~~~~~~~e~~~~~~~g~~~~~~~~~~~~~~i 336 (381)
T COG0438 262 LG----YVPDEELAELLAS-ADVFVLPSLSEGFGLVLLEAMAAGTPVIASDVGGIPEVVEDGETGLLVPPGDVEELADAL 336 (381)
T ss_pred ec----ccCHHHHHHHHHh-CCEEEeccccccchHHHHHHHhcCCcEEECCCCChHHHhcCCCceEecCCCCHHHHHHHH
Confidence 99 5556788887775 899999999999999999999999999999999999999998779877777899999999
Q ss_pred HHHHHHhhCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHh
Q 003962 701 VDFFEKCKADPSYWDKISLGGLKRIEEKYTWKIYSQRLLTLTGVY 745 (783)
Q Consensus 701 ~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~~~a~~ll~ly~~~ 745 (783)
..++ ++++.++.+++.+++.+.+.|+|+..++++.+++...
T Consensus 337 ~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 377 (381)
T COG0438 337 EQLL----EDPELREELGEAARERVEEEFSWERIAEQLLELYEEL 377 (381)
T ss_pred HHHh----cCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHH
Confidence 7766 7778899999877777778999999999999987653
No 85
>PRK13608 diacylglycerol glucosyltransferase; Provisional
Probab=99.83 E-value=7e-19 Score=197.61 Aligned_cols=262 Identities=15% Similarity=0.135 Sum_probs=176.9
Q ss_pred CCceEEEEcCCCchHHHHHHHHhcCCcEEEEecCCCccCCCCCchhhhhccccccccchhhHhHHhhhcCCEEEcCCHHH
Q 003962 382 GKPDLIIGNYSDGNIVASLLAHKLGVTQCTIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTFQE 461 (783)
Q Consensus 382 ~~pDIIh~h~~~~~lva~llar~lgvp~v~t~H~l~~~~~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~ 461 (783)
.+||+||++++.+++.....++..++|+++..++.... . .+..+.+|.+++.|+..
T Consensus 103 ~kPDvVi~~~p~~~~~~l~~~~~~~iP~~~v~td~~~~------~------------------~w~~~~~d~~~v~s~~~ 158 (391)
T PRK13608 103 EKPDLILLTFPTPVMSVLTEQFNINIPVATVMTDYRLH------K------------------NWITPYSTRYYVATKET 158 (391)
T ss_pred hCcCEEEECCcHHHHHHHHHhcCCCCCEEEEeCCCCcc------c------------------ccccCCCCEEEECCHHH
Confidence 58999999866553322222344689976544432100 0 12356899999999887
Q ss_pred HhhccccccccccccccccccceeeeccCCCCCCcEEEecCCccCCCCCCCchHHHhhccCchhhHHhhcChhhhhhhhc
Q 003962 462 IAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEEKRRLKSFHPEIEELLYSDVENKEHLC 541 (783)
Q Consensus 462 ~~~~~~~v~qy~~~~~f~~p~l~~v~~gi~~~~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~~~~~l~~~~~~~~~~g 541 (783)
.+.+. ..|++ .+|+.+++++++.....+.... ..++++|
T Consensus 159 ~~~l~--------------------~~gi~--~~ki~v~GiPv~~~f~~~~~~~-------------------~~~~~~~ 197 (391)
T PRK13608 159 KQDFI--------------------DVGID--PSTVKVTGIPIDNKFETPIDQK-------------------QWLIDNN 197 (391)
T ss_pred HHHHH--------------------HcCCC--HHHEEEECeecChHhcccccHH-------------------HHHHHcC
Confidence 66322 12554 6788888887764322221111 1234567
Q ss_pred cccCCCCcE-EEEEecccCCCCHHHHHHHHHHhHccCCCeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHHcCCCCcEEE
Q 003962 542 VLKDRNKPI-LFTMARLDRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLNGQFRW 620 (783)
Q Consensus 542 ll~~~~k~i-Il~vGRL~~~Kgl~~LieA~~~l~~~~~~~~LvIVG~g~~~~~~~~ee~~~~~~l~~li~~~~L~~~V~f 620 (783)
+ ++++++ +++.|+++..||+..+++++.+ ..+++++++++|+.. +..+++.+.++..++|.+
T Consensus 198 l--~~~~~~ilv~~G~lg~~k~~~~li~~~~~---~~~~~~~vvv~G~~~------------~l~~~l~~~~~~~~~v~~ 260 (391)
T PRK13608 198 L--DPDKQTILMSAGAFGVSKGFDTMITDILA---KSANAQVVMICGKSK------------ELKRSLTAKFKSNENVLI 260 (391)
T ss_pred C--CCCCCEEEEECCCcccchhHHHHHHHHHh---cCCCceEEEEcCCCH------------HHHHHHHHHhccCCCeEE
Confidence 6 455554 5678999989999999998632 346788877765421 111233334445568999
Q ss_pred ccCCCCcCChHHHHHHHHccCcEEEeCCCCCCCcHHHHHHHHcCCcEEEcC-cccc----ccccccCceEEEECCCCHHH
Q 003962 621 ISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATC-KGGP----AEIIVNGKSGYHIDPYHGEQ 695 (783)
Q Consensus 621 lG~~~~~~~~~el~~~ia~aadvfV~PS~~E~fGltvlEAMa~GlPVVat~-~GG~----~EiI~dg~~G~li~p~d~e~ 695 (783)
+|++ +++..+|+. +|++|. ++.|+|+.|||+||+|+|+++ .+|. ...+.+...|+.. .|+++
T Consensus 261 ~G~~------~~~~~~~~~-aDl~I~----k~gg~tl~EA~a~G~PvI~~~~~pgqe~~N~~~~~~~G~g~~~--~~~~~ 327 (391)
T PRK13608 261 LGYT------KHMNEWMAS-SQLMIT----KPGGITISEGLARCIPMIFLNPAPGQELENALYFEEKGFGKIA--DTPEE 327 (391)
T ss_pred Eecc------chHHHHHHh-hhEEEe----CCchHHHHHHHHhCCCEEECCCCCCcchhHHHHHHhCCcEEEe--CCHHH
Confidence 9953 357888884 999996 457999999999999999995 3331 2233455566654 48999
Q ss_pred HHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Q 003962 696 AAEILVDFFEKCKADPSYWDKISLGGLKRIEEKYTWKIYSQRLLTLTG 743 (783)
Q Consensus 696 lAeaI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~~~a~~ll~ly~ 743 (783)
++++|.+++ +|++.+++|++++++.. ..++++.+++++++++.
T Consensus 328 l~~~i~~ll----~~~~~~~~m~~~~~~~~-~~~s~~~i~~~l~~l~~ 370 (391)
T PRK13608 328 AIKIVASLT----NGNEQLTNMISTMEQDK-IKYATQTICRDLLDLIG 370 (391)
T ss_pred HHHHHHHHh----cCHHHHHHHHHHHHHhc-CCCCHHHHHHHHHHHhh
Confidence 999996665 89999999999999986 67999999999998754
No 86
>TIGR00236 wecB UDP-N-acetylglucosamine 2-epimerase. Epimerase activity was also demonstrated in a bifunctional rat enzyme, for which the N-terminal domain appears to be orthologous. The set of proteins found above the suggested cutoff includes E. coli WecB in one of two deeply branched clusters and the rat UDP-N-acetylglucosamine 2-epimerase domain in the other.
Probab=99.80 E-value=4.7e-18 Score=188.82 Aligned_cols=274 Identities=12% Similarity=0.056 Sum_probs=179.5
Q ss_pred CCceEEEEcCCC-chHHHHHHHHhcCCcEEEEecCCCccCCCCCchhhhhccccccccchhhHhHH-hhhcCCEEEcCCH
Q 003962 382 GKPDLIIGNYSD-GNIVASLLAHKLGVTQCTIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLI-AMNHTDFIITSTF 459 (783)
Q Consensus 382 ~~pDIIh~h~~~-~~lva~llar~lgvp~v~t~H~l~~~~~~~s~~~~~~~~~~y~f~~~~~~e~~-a~~~AD~IIt~S~ 459 (783)
.+||+||+|... ..+.+.++++..|+|++.+-+++.... ....|... ..+. .-+.+|.++++|+
T Consensus 85 ~~pDiv~~~gd~~~~la~a~aa~~~~ipv~h~~~g~~s~~---~~~~~~~~-----------~~r~~~~~~ad~~~~~s~ 150 (365)
T TIGR00236 85 EKPDIVLVQGDTTTTLAGALAAFYLQIPVGHVEAGLRTGD---RYSPMPEE-----------INRQLTGHIADLHFAPTE 150 (365)
T ss_pred cCCCEEEEeCCchHHHHHHHHHHHhCCCEEEEeCCCCcCC---CCCCCccH-----------HHHHHHHHHHHhccCCCH
Confidence 479999999643 467788999999999876655441100 00001100 0112 2335899999998
Q ss_pred HHHhhccccccccccccccccccceeeeccCCCCCCcEEEecCCccCCCCCCCchHHHhhccCchhhHHhhcChhhhhhh
Q 003962 460 QEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEEKRRLKSFHPEIEELLYSDVENKEH 539 (783)
Q Consensus 460 ~~~~~~~~~v~qy~~~~~f~~p~l~~v~~gi~~~~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~~~~~l~~~~~~~~~ 539 (783)
..++.+.+ .|++ ++++.+++||+....+.+..... ....++.
T Consensus 151 ~~~~~l~~--------------------~G~~--~~~I~vign~~~d~~~~~~~~~~----------------~~~~~~~ 192 (365)
T TIGR00236 151 QAKDNLLR--------------------ENVK--ADSIFVTGNTVIDALLTNVEIAY----------------SSPVLSE 192 (365)
T ss_pred HHHHHHHH--------------------cCCC--cccEEEeCChHHHHHHHHHhhcc----------------chhHHHh
Confidence 87764322 1444 77999999997322221111000 0011223
Q ss_pred hccccCCCCcEEEEEe-ccc-CCCCHHHHHHHHHHhHccCCCeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHHcCCCCc
Q 003962 540 LCVLKDRNKPILFTMA-RLD-RVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLNGQ 617 (783)
Q Consensus 540 ~gll~~~~k~iIl~vG-RL~-~~Kgl~~LieA~~~l~~~~~~~~LvIVG~g~~~~~~~~ee~~~~~~l~~li~~~~L~~~ 617 (783)
++. +++++++++ |.. ..||+..+++|+.++.+..|+++++++|++.. ...+ .+.+.++..++
T Consensus 193 ~~~----~~~~vl~~~hr~~~~~k~~~~ll~a~~~l~~~~~~~~~vi~~~~~~---------~~~~---~~~~~~~~~~~ 256 (365)
T TIGR00236 193 FGE----DKRYILLTLHRRENVGEPLENIFKAIREIVEEFEDVQIVYPVHLNP---------VVRE---PLHKHLGDSKR 256 (365)
T ss_pred cCC----CCCEEEEecCchhhhhhHHHHHHHHHHHHHHHCCCCEEEEECCCCh---------HHHH---HHHHHhCCCCC
Confidence 332 334555555 542 45899999999999887778899999865422 0111 13334456678
Q ss_pred EEEccCCCCcCChHHHHHHHHccCcEEEeCCCCCCCcHHHHHHHHcCCcEEEc-CccccccccccCceEEEECCCCHHHH
Q 003962 618 FRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFAT-CKGGPAEIIVNGKSGYHIDPYHGEQA 696 (783)
Q Consensus 618 V~flG~~~~~~~~~el~~~ia~aadvfV~PS~~E~fGltvlEAMa~GlPVVat-~~GG~~EiI~dg~~G~li~p~d~e~l 696 (783)
|.|+| .+...++..++++ +|+++.+| |..++|||+||+|||++ +.|+..|++.+| +|+++ +.|++++
T Consensus 257 v~~~~----~~~~~~~~~~l~~-ad~vv~~S-----g~~~~EA~a~g~PvI~~~~~~~~~e~~~~g-~~~lv-~~d~~~i 324 (365)
T TIGR00236 257 VHLIE----PLEYLDFLNLAAN-SHLILTDS-----GGVQEEAPSLGKPVLVLRDTTERPETVEAG-TNKLV-GTDKENI 324 (365)
T ss_pred EEEEC----CCChHHHHHHHHh-CCEEEECC-----hhHHHHHHHcCCCEEECCCCCCChHHHhcC-ceEEe-CCCHHHH
Confidence 99999 6667788888986 99999887 66789999999999996 778888998877 55566 4799999
Q ss_pred HHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHH
Q 003962 697 AEILVDFFEKCKADPSYWDKISLGGLKRIEEKYTWKIYSQRLLT 740 (783)
Q Consensus 697 AeaI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~~~a~~ll~ 740 (783)
+++|.+++ +|++.+++|++++.... +..+++++++.+.+
T Consensus 325 ~~ai~~ll----~~~~~~~~~~~~~~~~g-~~~a~~ri~~~l~~ 363 (365)
T TIGR00236 325 TKAAKRLL----TDPDEYKKMSNASNPYG-DGEASERIVEELLN 363 (365)
T ss_pred HHHHHHHH----hChHHHHHhhhcCCCCc-CchHHHHHHHHHHh
Confidence 99996665 89999998887663222 34556666655554
No 87
>TIGR02398 gluc_glyc_Psyn glucosylglycerol-phosphate synthase. Glucosylglycerol-phosphate synthase catalyzes the key step in the biosynthesis of the osmolyte glucosylglycerol. It is known in several cyanobacteria and in Pseudomonas anguilliseptica. The enzyme is closely related to the alpha,alpha-trehalose-phosphate synthase, likewise involved in osmolyte biosynthesis, of E. coli and many other bacteria. A close homolog from Xanthomonas campestris is excluded from this model and scores between trusted and noise.
Probab=99.79 E-value=3.7e-17 Score=186.03 Aligned_cols=317 Identities=11% Similarity=0.057 Sum_probs=216.0
Q ss_pred CceEEEEcCCCchHHHHHHHHhc-CCcEEEEecCCCccCCCCCchhhhhccccccccchhhHhHHhhhcCCEEEcCCHHH
Q 003962 383 KPDLIIGNYSDGNIVASLLAHKL-GVTQCTIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTFQE 461 (783)
Q Consensus 383 ~pDIIh~h~~~~~lva~llar~l-gvp~v~t~H~l~~~~~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~ 461 (783)
.-|+|-.|.....+++.++.++. ..++-+..|..+ |.+++.. .+ + .-..-+..|-.||.|=.-|+..
T Consensus 132 ~~d~vWVhDYhL~llp~~LR~~~~~~~IgfFlHiPF----Ps~eifr-~L-P------~r~~ll~glL~aDliGFqt~~y 199 (487)
T TIGR02398 132 EGATVWVHDYNLWLVPGYIRQLRPDLKIAFFHHTPF----PSADVFN-IL-P------WREQIIGSLLCCDYIGFHIPRY 199 (487)
T ss_pred CCCEEEEecchhhHHHHHHHHhCCCCeEEEEeeCCC----CChHHHh-hC-C------chHHHHHHHhcCCeEEeCCHHH
Confidence 45899999988877888777653 467778888643 3333221 11 0 1112234677999999999887
Q ss_pred Hhhccccccccccccccc----cccc---------eeeeccCCCCCC--cEEEecCCccCCCCCCCchHHHhhccCchhh
Q 003962 462 IAGSKDTVGQYESHTAFT----LPGL---------YRVVHGIDVFDP--KFNIVSPGADMSIYFPYTEEKRRLKSFHPEI 526 (783)
Q Consensus 462 ~~~~~~~v~qy~~~~~f~----~p~l---------~~v~~gi~~~~~--k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~~ 526 (783)
+..+.+.+........-. .++. .....++..... ++.++|.|||.+.|.+......... .
T Consensus 200 ~~~Fl~~~~r~lg~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~gr~v~v~~~PiGID~~~f~~~~~~~~~~~----~- 274 (487)
T TIGR02398 200 VENFVDAARGLMPLQTVSRQNVDPRFITVGTALGEERMTTALDTGNRVVKLGAHPVGTDPERIRSALAAASIRE----M- 274 (487)
T ss_pred HHHHHHHHHHHhCCccccccccccccccccccccccccccceeECCEEEEEEEEECEecHHHHHHHhcCchHHH----H-
Confidence 766555433221100000 0000 000001221122 4678999999998855321110000 0
Q ss_pred HHhhcChhhhhhhhccccCCCCcEEEEEecccCCCCHHHHHHHHHHhHccCCC----eEEEEEeCCCCCCCccHHHHHHH
Q 003962 527 EELLYSDVENKEHLCVLKDRNKPILFTMARLDRVKNLTGLVEWYGKNAKLREL----VNLVVVGGDRRKESKDLEEQAEM 602 (783)
Q Consensus 527 ~~~l~~~~~~~~~~gll~~~~k~iIl~vGRL~~~Kgl~~LieA~~~l~~~~~~----~~LvIVG~g~~~~~~~~ee~~~~ 602 (783)
....++++| ++++|++++|++..||+...++||+++.+.+|+ +.|+++|.+... ...+.....
T Consensus 275 ------~~~lr~~~~-----~~kiIl~VDRLDy~KGI~~kl~Afe~~L~~~Pe~~gkv~Lvqi~~psr~--~v~~y~~l~ 341 (487)
T TIGR02398 275 ------MERIRSELA-----GVKLILSAERVDYTKGILEKLNAYERLLERRPELLGKVTLVTACVPAAS--GMTIYDELQ 341 (487)
T ss_pred ------HHHHHHHcC-----CceEEEEecccccccCHHHHHHHHHHHHHhCccccCceEEEEEeCCCcc--cchHHHHHH
Confidence 011233333 578999999999999999999999999888885 699999987542 233445566
Q ss_pred HHHHHHHHHc-------CCCCcEEEccCCCCcCChHHHHHHHHccCcEEEeCCCCCCCcHHHHHHHHcCC----cEEEcC
Q 003962 603 KKMYSLIDQY-------KLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGL----PTFATC 671 (783)
Q Consensus 603 ~~l~~li~~~-------~L~~~V~flG~~~~~~~~~el~~~ia~aadvfV~PS~~E~fGltvlEAMa~Gl----PVVat~ 671 (783)
+++++++.+. +..+-+.+.+ .++.+++..+|+ .||+++.||+.||++++..|+|+|+. |+|.|.
T Consensus 342 ~~v~~~v~~IN~~fg~~~~~pv~~~~~----~v~~~el~alYr-~ADV~lvT~lrDGmNLVa~Eyva~~~~~~GvLILSe 416 (487)
T TIGR02398 342 GQIEQAVGRINGRFARIGWTPLQFFTR----SLPYEEVSAWFA-MADVMWITPLRDGLNLVAKEYVAAQGLLDGVLVLSE 416 (487)
T ss_pred HHHHHHHHHHhhccCCCCCccEEEEcC----CCCHHHHHHHHH-hCCEEEECccccccCcchhhHHhhhcCCCCCEEEec
Confidence 6777777765 3334456666 788999999999 49999999999999999999999998 999999
Q ss_pred ccccccccccCceEEEECCCCHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHH
Q 003962 672 KGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEEKYTWKIYSQRLLTL 741 (783)
Q Consensus 672 ~GG~~EiI~dg~~G~li~p~d~e~lAeaI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~~~a~~ll~l 741 (783)
.+|.++.. ..+++++|.|++++|++|.++++ ..++.+++--+..++.+ ..+|....++.+++-
T Consensus 417 faGaa~~l---~~AllVNP~d~~~~A~ai~~AL~---m~~~Er~~R~~~l~~~v-~~~d~~~W~~~fl~~ 479 (487)
T TIGR02398 417 FAGAAVEL---KGALLTNPYDPVRMDETIYVALA---MPKAEQQARMREMFDAV-NYYDVQRWADEFLAA 479 (487)
T ss_pred cccchhhc---CCCEEECCCCHHHHHHHHHHHHc---CCHHHHHHHHHHHHHHH-hhCCHHHHHHHHHHH
Confidence 99998766 35899999999999999998874 45556666666677777 788988888888763
No 88
>PRK09814 beta-1,6-galactofuranosyltransferase; Provisional
Probab=99.77 E-value=2.2e-17 Score=181.61 Aligned_cols=240 Identities=15% Similarity=0.150 Sum_probs=164.0
Q ss_pred Cc-eEEEEcCCCch---HHHHHH--HHhcCCcEEEEecCCCccCCCCCchhhhhccccccccchhhHhHHhhhcCCEEEc
Q 003962 383 KP-DLIIGNYSDGN---IVASLL--AHKLGVTQCTIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIIT 456 (783)
Q Consensus 383 ~p-DIIh~h~~~~~---lva~ll--ar~lgvp~v~t~H~l~~~~~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt 456 (783)
++ |+||.+++... +...++ .++.|+|+|+++|++++....... + + ...+...++.||.||+
T Consensus 63 ~~~Dvv~~~~P~~~~~~~~~~~~~~~k~~~~k~i~~ihD~~~~~~~~~~---------~-~---~~~~~~~~~~aD~iI~ 129 (333)
T PRK09814 63 KPGDIVIFQFPTWNGFEFDRLFVDKLKKKQVKIIILIHDIEPLRFDSNY---------Y-L---MKEEIDMLNLADVLIV 129 (333)
T ss_pred CCCCEEEEECCCCchHHHHHHHHHHHHHcCCEEEEEECCcHHHhccccc---------h-h---hHHHHHHHHhCCEEEE
Confidence 45 99999887542 112222 234489999999997653211000 0 0 1235678999999999
Q ss_pred CCHHHHhhccccccccccccccccccceeeeccCCCCCCcEEEecCCccCCCCCCCchHHHhhccCchhhHHhhcChhhh
Q 003962 457 STFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEEKRRLKSFHPEIEELLYSDVEN 536 (783)
Q Consensus 457 ~S~~~~~~~~~~v~qy~~~~~f~~p~l~~v~~gi~~~~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~~~~~l~~~~~~ 536 (783)
.|+.+.+.+++ +|+. ..++.++++..+.....+. .
T Consensus 130 ~S~~~~~~l~~--------------------~g~~--~~~i~~~~~~~~~~~~~~~----~------------------- 164 (333)
T PRK09814 130 HSKKMKDRLVE--------------------EGLT--TDKIIVQGIFDYLNDIELV----K------------------- 164 (333)
T ss_pred CCHHHHHHHHH--------------------cCCC--cCceEeccccccccccccc----c-------------------
Confidence 99988774332 2333 4567666665543211100 0
Q ss_pred hhhhccccCCCCcEEEEEecccCCCCHHHHHHHHHHhHccCCCeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHHcCCCC
Q 003962 537 KEHLCVLKDRNKPILFTMARLDRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLNG 616 (783)
Q Consensus 537 ~~~~gll~~~~k~iIl~vGRL~~~Kgl~~LieA~~~l~~~~~~~~LvIVG~g~~~~~~~~ee~~~~~~l~~li~~~~L~~ 616 (783)
....++.|+|+|++++.+++ ....++++|+|+|+|+.. + ...+
T Consensus 165 -------~~~~~~~i~yaG~l~k~~~l----------~~~~~~~~l~i~G~g~~~-----------~---------~~~~ 207 (333)
T PRK09814 165 -------TPSFQKKINFAGNLEKSPFL----------KNWSQGIKLTVFGPNPED-----------L---------ENSA 207 (333)
T ss_pred -------cccCCceEEEecChhhchHH----------HhcCCCCeEEEECCCccc-----------c---------ccCC
Confidence 02345689999999954321 113467999999999752 1 2457
Q ss_pred cEEEccCCCCcCChHHHHHHHHccCcEEEeCC-C----------CCCCcHHHHHHHHcCCcEEEcCccccccccccCceE
Q 003962 617 QFRWISSQMNRVRNGELYRYICDTKGAFVQPA-L----------YEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSG 685 (783)
Q Consensus 617 ~V~flG~~~~~~~~~el~~~ia~aadvfV~PS-~----------~E~fGltvlEAMa~GlPVVat~~GG~~EiI~dg~~G 685 (783)
+|.|+| +++.+++..+++. |+.+.+. . .-++|.++.|+||||+|||+++.++.+|+|+++.+|
T Consensus 208 ~V~f~G----~~~~eel~~~l~~--~~gLv~~~~~~~~~~~~y~~~~~P~K~~~ymA~G~PVI~~~~~~~~~~V~~~~~G 281 (333)
T PRK09814 208 NISYKG----WFDPEELPNELSK--GFGLVWDGDTNDGEYGEYYKYNNPHKLSLYLAAGLPVIVWSKAAIADFIVENGLG 281 (333)
T ss_pred CeEEec----CCCHHHHHHHHhc--CcCeEEcCCCCCccchhhhhccchHHHHHHHHCCCCEEECCCccHHHHHHhCCce
Confidence 899999 7888999999985 4333322 1 135788999999999999999999999999999999
Q ss_pred EEECCCCHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhCCHH
Q 003962 686 YHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEEKYTWK 732 (783)
Q Consensus 686 ~li~p~d~e~lAeaI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~ 732 (783)
++++ +.++++++|..+ +++.+++|++++++.+ +++.-.
T Consensus 282 ~~v~--~~~el~~~l~~~------~~~~~~~m~~n~~~~~-~~~~~g 319 (333)
T PRK09814 282 FVVD--SLEELPEIIDNI------TEEEYQEMVENVKKIS-KLLRNG 319 (333)
T ss_pred EEeC--CHHHHHHHHHhc------CHHHHHHHHHHHHHHH-HHHhcc
Confidence 9998 788899988542 4577899999999877 444433
No 89
>PRK00025 lpxB lipid-A-disaccharide synthase; Reviewed
Probab=99.76 E-value=1.3e-16 Score=177.82 Aligned_cols=249 Identities=14% Similarity=0.132 Sum_probs=161.3
Q ss_pred CCceEEEEcCCCc-hHHHHHHHHhcCCcEEEEecCCCccCCCCCchhhhhccccccccchhhHhHHhhhcCCEEEcCCHH
Q 003962 382 GKPDLIIGNYSDG-NIVASLLAHKLGVTQCTIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTFQ 460 (783)
Q Consensus 382 ~~pDIIh~h~~~~-~lva~llar~lgvp~v~t~H~l~~~~~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~ 460 (783)
.+||+||++.+.+ .......+++.|+|+++..|.. .|...... . ....+.+|.++++|+.
T Consensus 84 ~kPdivi~~~~~~~~~~~a~~a~~~~ip~i~~~~~~----------~~~~~~~~--------~-~~~~~~~d~i~~~~~~ 144 (380)
T PRK00025 84 EPPDVFIGIDAPDFNLRLEKKLRKAGIPTIHYVSPS----------VWAWRQGR--------A-FKIAKATDHVLALFPF 144 (380)
T ss_pred cCCCEEEEeCCCCCCHHHHHHHHHCCCCEEEEeCCc----------hhhcCchH--------H-HHHHHHHhhheeCCcc
Confidence 4799999876532 2222344566799988765531 12111000 0 1236688999999976
Q ss_pred HHhhccccccccccccccccccceeeeccCCCCCCcEEEecCCccCCCCCCCchHHHhhccCchhhHHhhcChhhhhhhh
Q 003962 461 EIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEEKRRLKSFHPEIEELLYSDVENKEHL 540 (783)
Q Consensus 461 ~~~~~~~~v~qy~~~~~f~~p~l~~v~~gi~~~~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~~~~~l~~~~~~~~~~ 540 (783)
..+.+.+ .|+ ++.+++|.+......+... .+.++.+
T Consensus 145 ~~~~~~~--------------------~g~-----~~~~~G~p~~~~~~~~~~~-------------------~~~~~~l 180 (380)
T PRK00025 145 EAAFYDK--------------------LGV-----PVTFVGHPLADAIPLLPDR-------------------AAARARL 180 (380)
T ss_pred CHHHHHh--------------------cCC-----CeEEECcCHHHhcccccCh-------------------HHHHHHc
Confidence 5442111 111 2555666554322111111 1223456
Q ss_pred ccccCCCCcEEE-EEe-cccCC-CCHHHHHHHHHHhHccCCCeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHHc-CCCC
Q 003962 541 CVLKDRNKPILF-TMA-RLDRV-KNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQY-KLNG 616 (783)
Q Consensus 541 gll~~~~k~iIl-~vG-RL~~~-Kgl~~LieA~~~l~~~~~~~~LvIVG~g~~~~~~~~ee~~~~~~l~~li~~~-~L~~ 616 (783)
|+ ++++++++ +.| |.... ++++.+++++..+.+..++++++++|+++. ..+++++.++++ ++.
T Consensus 181 ~~--~~~~~~il~~~gsr~~~~~~~~~~l~~a~~~l~~~~~~~~~ii~~~~~~----------~~~~~~~~~~~~~~~~- 247 (380)
T PRK00025 181 GL--DPDARVLALLPGSRGQEIKRLLPPFLKAAQLLQQRYPDLRFVLPLVNPK----------RREQIEEALAEYAGLE- 247 (380)
T ss_pred CC--CCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHhCCCeEEEEecCChh----------hHHHHHHHHhhcCCCC-
Confidence 76 55566654 444 44444 457899999999987788999999987432 234566666666 543
Q ss_pred cEEEccCCCCcCChHHHHHHHHccCcEEEeCCCCCCCcHHHHHHHHcCCcEEEc-----------------Ccccccccc
Q 003962 617 QFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFAT-----------------CKGGPAEII 679 (783)
Q Consensus 617 ~V~flG~~~~~~~~~el~~~ia~aadvfV~PS~~E~fGltvlEAMa~GlPVVat-----------------~~GG~~EiI 679 (783)
+.+.. +++..+++. +|++|.+| |.+.+|||+||+|+|++ +.++.++++
T Consensus 248 -v~~~~--------~~~~~~~~~-aDl~v~~s-----G~~~lEa~a~G~PvI~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 312 (380)
T PRK00025 248 -VTLLD--------GQKREAMAA-ADAALAAS-----GTVTLELALLKVPMVVGYKVSPLTFWIAKRLVKVPYVSLPNLL 312 (380)
T ss_pred -eEEEc--------ccHHHHHHh-CCEEEECc-----cHHHHHHHHhCCCEEEEEccCHHHHHHHHHHHcCCeeehHHHh
Confidence 55543 367888884 99999987 88889999999999987 567777888
Q ss_pred ccCc--eEEEECCCCHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHH
Q 003962 680 VNGK--SGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRI 725 (783)
Q Consensus 680 ~dg~--~G~li~p~d~e~lAeaI~~~l~~l~~dp~~~~~ms~~a~~~v 725 (783)
.++. .+++.+..|++++++++.+++ .|++.+++|++++.+..
T Consensus 313 ~~~~~~~~~~~~~~~~~~l~~~i~~ll----~~~~~~~~~~~~~~~~~ 356 (380)
T PRK00025 313 AGRELVPELLQEEATPEKLARALLPLL----ADGARRQALLEGFTELH 356 (380)
T ss_pred cCCCcchhhcCCCCCHHHHHHHHHHHh----cCHHHHHHHHHHHHHHH
Confidence 7764 557777889999999997666 89999999999875544
No 90
>cd04299 GT1_Glycogen_Phosphorylase_like This family is most closely related to the oligosaccharide phosphorylase domain family and other unidentified sequences. Oligosaccharide phosphorylase catalyzes the breakdown of oligosaccharides into glucose-1-phosphate units. They are important allosteric enzymes in carbohydrate metabolism. The members of this family are found in bacteria and Archaea.
Probab=99.76 E-value=1.8e-16 Score=188.36 Aligned_cols=344 Identities=14% Similarity=0.116 Sum_probs=234.6
Q ss_pred HHHHHcCCCceEEEEcCCCchHHHH-----HHHHh----------cCCcEEEEecCCCccC---CCCCch----------
Q 003962 375 EIAKELQGKPDLIIGNYSDGNIVAS-----LLAHK----------LGVTQCTIAHALEKTK---YPDSDI---------- 426 (783)
Q Consensus 375 ~l~~~l~~~pDIIh~h~~~~~lva~-----llar~----------lgvp~v~t~H~l~~~~---~~~s~~---------- 426 (783)
++++.+..+|||||+|.+.++++.. ++... .+.+.|+|.|+..+.. ++...+
T Consensus 240 ~~Lr~lg~~pdViH~ND~Haal~~lE~~R~ll~~~g~~~~~A~e~vr~~tvFTtHTpvpqG~d~Fp~~l~~~~~~~~~~~ 319 (778)
T cd04299 240 RALRALGIKPTVYHMNEGHAAFLGLERIRELMAEGGLSFDEALEAVRASTVFTTHTPVPAGHDRFPPDLVERYFGPYARE 319 (778)
T ss_pred HHHHHhCCCCeEEEeCCCcHHHHHHHHHHHHHHHcCCCHHHHHHhhCCeEEEecCCchHHHhhhCCHHHHHHHhhHHHHH
Confidence 4445556689999999999988776 44321 1356899999975544 221111
Q ss_pred ---hhhhccccc-cc----cchhhHhHHhhhcCCEEEcCCHHHHhhccccccccccccccccccceeeeccCCCCCCcEE
Q 003962 427 ---YWKNLDDKY-HF----SCQFTADLIAMNHTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFN 498 (783)
Q Consensus 427 ---~~~~~~~~y-~f----~~~~~~e~~a~~~AD~IIt~S~~~~~~~~~~v~qy~~~~~f~~p~l~~v~~gi~~~~~k~~ 498 (783)
.+..+...- .+ ..++..-..++..|+.|.++|+-.-.-.++.... ...|.+....++.
T Consensus 320 lgl~~~~~~~lg~e~~~~~~~~~nM~~laL~~S~~vNgVS~lHg~vsr~mf~~--------------~~~g~p~~~~~i~ 385 (778)
T cd04299 320 LGLSRDRFLALGRENPGDDPEPFNMAVLALRLAQRANGVSRLHGEVSREMFAG--------------LWPGFPVEEVPIG 385 (778)
T ss_pred cCCCHHHHhhhccccccCccCceeHHHHHHHhcCeeeeecHHHHHHHHHHhhh--------------hhccCCcccCcee
Confidence 111110000 00 1234556678999999999998653323333211 1123332244688
Q ss_pred EecCCccCCCCC-CCchHHHhhccC-------------------chh---hHHhhcChhhhhhh----------------
Q 003962 499 IVSPGADMSIYF-PYTEEKRRLKSF-------------------HPE---IEELLYSDVENKEH---------------- 539 (783)
Q Consensus 499 VIpnGvD~~~f~-p~~~~~~r~~~~-------------------~~~---~~~~l~~~~~~~~~---------------- 539 (783)
-|.||||...+. |.....-. +.+ .+. .+...-++..+.+.
T Consensus 386 ~ITNGVh~~~W~~P~~~~l~~-~~~g~~w~~~~~~~~~~~~~~~i~d~~lw~~K~~~K~~L~~~v~~~~~~~~~~~g~~~ 464 (778)
T cd04299 386 HVTNGVHVPTWVAPEMRELYD-RYLGGDWRERPTDPELWEAVDDIPDEELWEVRQQLRRRLIEFVRRRLRRQWLRRGASA 464 (778)
T ss_pred ceeCCcchhhhcCHHHHHHHH-HhcCcchhhccchHHHHhhhcCCCcHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCch
Confidence 899999998887 43222110 000 001 11111111111111
Q ss_pred -----hccccCCCCcEEEEEecccCCCCHHHHHHHHHHhHccC----CCeEEEEEeCCCCCCCccHHHHHHHHHHHHHHH
Q 003962 540 -----LCVLKDRNKPILFTMARLDRVKNLTGLVEWYGKNAKLR----ELVNLVVVGGDRRKESKDLEEQAEMKKMYSLID 610 (783)
Q Consensus 540 -----~gll~~~~k~iIl~vGRL~~~Kgl~~LieA~~~l~~~~----~~~~LvIVG~g~~~~~~~~ee~~~~~~l~~li~ 610 (783)
.+...+++.++|+++.|+..+|+.+++++.+.++.+.- ..+++|+.|.+.+. |...+..++.+.++++
T Consensus 465 ~~~~~~~~~ldpd~ltigfarRfa~YKR~~Lil~dl~rl~~il~~~~~pvQ~IfaGKAhP~---d~~gK~iIk~i~~~a~ 541 (778)
T cd04299 465 EEIGEADDVLDPNVLTIGFARRFATYKRATLLLRDPERLKRLLNDPERPVQFIFAGKAHPA---DEPGKELIQEIVEFSR 541 (778)
T ss_pred hhhhhcCCccCCCccEEeeeecchhhhhHHHHHHHHHHHHHHhhCCCCCeEEEEEEecCcc---chHHHHHHHHHHHHHh
Confidence 13334677889999999999999999999988875521 35999999998753 4455678888888888
Q ss_pred HcCCCCcEEEccCCCCcCChHHHHHHHHccCcEEEeCCC--CCCCcHHHHHHHHcCCcEEEcCccccccccccCceEEEE
Q 003962 611 QYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPAL--YEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHI 688 (783)
Q Consensus 611 ~~~L~~~V~flG~~~~~~~~~el~~~ia~aadvfV~PS~--~E~fGltvlEAMa~GlPVVat~~GG~~EiI~dg~~G~li 688 (783)
+....++|.|+- -.+..+.+.|-..+|++++||+ +|++|++-+-||.-|.+.+++-.|...|-. +|.|||.|
T Consensus 542 ~p~~~~kVvfle-----~Yd~~lA~~LvaG~DvwLn~prrp~EAsGTSgMKA~~NG~LnlSvlDGww~E~~-~g~nGwai 615 (778)
T cd04299 542 RPEFRGRIVFLE-----DYDMALARHLVQGVDVWLNTPRRPLEASGTSGMKAALNGGLNLSVLDGWWDEGY-DGENGWAI 615 (778)
T ss_pred CcCCCCcEEEEc-----CCCHHHHHHHHhhhhhcccCCCCCCCCCccchHHHHHcCCeeeecccCcccccc-CCCCceEe
Confidence 767778999995 3456777777778999999999 999999999999999999999999999987 88999999
Q ss_pred CC------------CCHHHHHHHHHHHHH-HhhC-----CHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Q 003962 689 DP------------YHGEQAAEILVDFFE-KCKA-----DPSYWDKISLGGLKRIEEKYTWKIYSQRLLTLT 742 (783)
Q Consensus 689 ~p------------~d~e~lAeaI~~~l~-~l~~-----dp~~~~~ms~~a~~~v~~~ysw~~~a~~ll~ly 742 (783)
.+ .|++++-+.|.+.+- ...+ .|..|.+|.+++++.+...|||++++++|.+-+
T Consensus 616 g~~~~~~~~~~~d~~da~~Ly~~Le~~i~p~yy~r~~~g~p~~W~~~~k~sm~~~~p~fs~~Rmv~eY~~~~ 687 (778)
T cd04299 616 GDGDEYEDDEYQDAEEAEALYDLLENEVIPLFYDRDEGGYPPGWVAMMKHSMATLGPRFSAERMVREYVERF 687 (778)
T ss_pred CCCccccChhhcchhhHHHHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHhcccCCCHHHHHHHHHHHh
Confidence 88 566667677754433 2223 278899999999999888999999999999754
No 91
>cd03786 GT1_UDP-GlcNAc_2-Epimerase Bacterial members of the UDP-N-Acetylglucosamine (GlcNAc) 2-Epimerase family are known to catalyze the reversible interconversion of UDP-GlcNAc and UDP-N-acetylmannosamine (UDP-ManNAc). The enzyme serves to produce an activated form of ManNAc residues (UDP-ManNAc) for use in the biosynthesis of a variety of cell surface polysaccharides; The mammalian enzyme is bifunctional, catalyzing both the inversion of stereochemistry at C-2 and the hydrolysis of the UDP-sugar linkage to generate free ManNAc. It also catalyzes the phosphorylation of ManNAc to generate ManNAc 6-phosphate, a precursor to salic acids. In mammals, sialic acids are found at the termini of oligosaccharides in a large variety of cell surface glycoconjugates and are key mediators of cell-cell recognition events. Mutations in human members of this family have been associated with Sialuria, a rare disease caused by the disorders of sialic acid metabolism. This family belongs to the GT-B st
Probab=99.74 E-value=1.2e-16 Score=176.57 Aligned_cols=252 Identities=17% Similarity=0.131 Sum_probs=167.3
Q ss_pred CCceEEEEcCCCc-hHHHHHHHHhcCCcEEEEecCCCccCCCCCchhhhhccccccccchhhHhHHhhhcCCEEEcCCHH
Q 003962 382 GKPDLIIGNYSDG-NIVASLLAHKLGVTQCTIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTFQ 460 (783)
Q Consensus 382 ~~pDIIh~h~~~~-~lva~llar~lgvp~v~t~H~l~~~~~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~ 460 (783)
.+||+||+|.... .+.+.++++..|+|++.+.|+... +.... .|.. . .....+.+|.++++|+.
T Consensus 87 ~~pDvV~~~g~~~~~~~~~~aa~~~~iPvv~~~~g~~s--~~~~~-~~~~----~--------r~~~~~~ad~~~~~s~~ 151 (363)
T cd03786 87 EKPDLVLVLGDTNETLAAALAAFKLGIPVAHVEAGLRS--FDRGM-PDEE----N--------RHAIDKLSDLHFAPTEE 151 (363)
T ss_pred hCCCEEEEeCCchHHHHHHHHHHHcCCCEEEEeccccc--CCCCC-CchH----H--------HHHHHHHhhhccCCCHH
Confidence 4799999996543 567788888899998877765422 10000 1110 0 11235678999999988
Q ss_pred HHhhccccccccccccccccccceeeeccCCCCCCcEEEecCCc-cCCCCCCCchHHHhhccCchhhHHhhcChhhhhhh
Q 003962 461 EIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGA-DMSIYFPYTEEKRRLKSFHPEIEELLYSDVENKEH 539 (783)
Q Consensus 461 ~~~~~~~~v~qy~~~~~f~~p~l~~v~~gi~~~~~k~~VIpnGv-D~~~f~p~~~~~~r~~~~~~~~~~~l~~~~~~~~~ 539 (783)
..+.+. ..|++ +.++.+++|++ |...+.+...... ..++.
T Consensus 152 ~~~~l~--------------------~~G~~--~~kI~vign~v~d~~~~~~~~~~~~-----------------~~~~~ 192 (363)
T cd03786 152 ARRNLL--------------------QEGEP--PERIFVVGNTMIDALLRLLELAKKE-----------------LILEL 192 (363)
T ss_pred HHHHHH--------------------HcCCC--cccEEEECchHHHHHHHHHHhhccc-----------------hhhhh
Confidence 766322 12454 77899999985 5322211110000 01123
Q ss_pred hccccCCCCcEEEEEecccC---CCCHHHHHHHHHHhHccCCCeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHHcCC-C
Q 003962 540 LCVLKDRNKPILFTMARLDR---VKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKL-N 615 (783)
Q Consensus 540 ~gll~~~~k~iIl~vGRL~~---~Kgl~~LieA~~~l~~~~~~~~LvIVG~g~~~~~~~~ee~~~~~~l~~li~~~~L-~ 615 (783)
+|+ ++++.++++.||... .||++.+++++.++.+. ++.+++.|++.. .+++++.++++++ .
T Consensus 193 ~~~--~~~~~vlv~~~r~~~~~~~k~~~~l~~al~~l~~~--~~~vi~~~~~~~-----------~~~l~~~~~~~~~~~ 257 (363)
T cd03786 193 LGL--LPKKYILVTLHRVENVDDGEQLEEILEALAELAEE--DVPVVFPNHPRT-----------RPRIREAGLEFLGHH 257 (363)
T ss_pred ccc--CCCCEEEEEeCCccccCChHHHHHHHHHHHHHHhc--CCEEEEECCCCh-----------HHHHHHHHHhhccCC
Confidence 454 445557778999875 79999999999988653 466666665532 3567777777776 6
Q ss_pred CcEEEccCCCCcCChHHHHHHHHccCcEEEeCCCCCCCcHHHHHHHHcCCcEEEcCc-cccccccccCceEEEECCCCHH
Q 003962 616 GQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCK-GGPAEIIVNGKSGYHIDPYHGE 694 (783)
Q Consensus 616 ~~V~flG~~~~~~~~~el~~~ia~aadvfV~PS~~E~fGltvlEAMa~GlPVVat~~-GG~~EiI~dg~~G~li~p~d~e 694 (783)
++|+|+| .....++..+++. +|++|.||- | ++.|||+||+|||+++. +...+.+.+|. ++.+. .|++
T Consensus 258 ~~v~~~~----~~~~~~~~~l~~~-ad~~v~~Sg----g-i~~Ea~~~g~PvI~~~~~~~~~~~~~~g~-~~~~~-~~~~ 325 (363)
T cd03786 258 PNVLLIS----PLGYLYFLLLLKN-ADLVLTDSG----G-IQEEASFLGVPVLNLRDRTERPETVESGT-NVLVG-TDPE 325 (363)
T ss_pred CCEEEEC----CcCHHHHHHHHHc-CcEEEEcCc----c-HHhhhhhcCCCEEeeCCCCccchhhheee-EEecC-CCHH
Confidence 7899998 5556788888885 999999984 4 47899999999999964 44667765542 33332 3699
Q ss_pred HHHHHHHHHHHHhhCCHHHHHHHH
Q 003962 695 QAAEILVDFFEKCKADPSYWDKIS 718 (783)
Q Consensus 695 ~lAeaI~~~l~~l~~dp~~~~~ms 718 (783)
+++++|.+++ +|+..+.+|.
T Consensus 326 ~i~~~i~~ll----~~~~~~~~~~ 345 (363)
T cd03786 326 AILAAIEKLL----SDEFAYSLMS 345 (363)
T ss_pred HHHHHHHHHh----cCchhhhcCC
Confidence 9999997665 7887776653
No 92
>KOG1387 consensus Glycosyltransferase [Cell wall/membrane/envelope biogenesis]
Probab=99.73 E-value=3.6e-15 Score=156.66 Aligned_cols=393 Identities=16% Similarity=0.210 Sum_probs=245.4
Q ss_pred ccCCC-cceEEEEcccccccccCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHHCCCceeeceeEEeCCCCCCCCC----
Q 003962 249 GRIPM-VFNVVILTPHGYFAQDDVLGYPDTGGQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRLLPDAVGT---- 323 (783)
Q Consensus 249 ~~~pm-~~rI~iis~h~~~~~~~~lg~p~tGG~~vyv~d~araL~~eLa~~L~~~GheV~~~i~VvT~~~~~~~g~---- 323 (783)
++.+. ...|+++.|+-. ..||-+.+..--+|++.+. -..+-. .|.|..+ +....
T Consensus 37 ~~~~k~~ktvgfFHPYCN----------AGGGGErVLW~Avr~~q~k------~~n~~~----viYsGD~-n~t~~~IL~ 95 (465)
T KOG1387|consen 37 NRAEKNVKTVGFFHPYCN----------AGGGGERVLWKAVRITQRK------FPNNVI----VIYSGDF-NVTPENILN 95 (465)
T ss_pred hhhhhhceEEEEeccccc----------CCCCcceehhHHHHHHHHh------CCCceE----EEEeCCC-CCCHHHHHH
Confidence 34343 355777766554 2377888888777765221 122222 3566543 21110
Q ss_pred cccceeeeecCccCeEEEEeccCCCccccccccccccchhhHH---HHHHHHHHHHHHHcCCCceEEEEcCCCchHHHHH
Q 003962 324 TCGQRLEKVYGTKYSDILRVPFRTEKGVVRKWISRFEVWPYLE---TYTEDVAVEIAKELQGKPDLIIGNYSDGNIVASL 400 (783)
Q Consensus 324 ~~~~~~e~i~~~~~v~Ilrvp~~~~~~~~~~~isr~~i~~~l~---~f~~~~~~~l~~~l~~~pDIIh~h~~~~~lva~l 400 (783)
...+..+.--+.+++..+.+..+. |+. ..-|+... .-.....-.+.+..+..|||.+-..-.+ +.-..
T Consensus 96 k~k~~F~idlDs~nI~Fi~Lk~R~-------lVe-a~~~~hfTllgQaigsmIl~~Eai~r~~Pdi~IDtMGY~-fs~p~ 166 (465)
T KOG1387|consen 96 KVKNKFDIDLDSDNIFFIYLKLRY-------LVE-ASTWKHFTLLGQAIGSMILAFEAIIRFPPDIFIDTMGYP-FSYPI 166 (465)
T ss_pred HHHHhcCceecccceEEEEEEeee-------eee-cccccceehHHHHHHHHHHHHHHHHhCCchheEecCCCc-chhHH
Confidence 011122222334566666655542 222 13333321 1111222223334457899998433222 22233
Q ss_pred HHHhcCCcEEEEecCCCcc-CC-------CCC-chhhhhccccccccchhhHhHHhhhcCCEEEcCCHHHHhhccccccc
Q 003962 401 LAHKLGVTQCTIAHALEKT-KY-------PDS-DIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTFQEIAGSKDTVGQ 471 (783)
Q Consensus 401 lar~lgvp~v~t~H~l~~~-~~-------~~s-~~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~~~~~~~~v~q 471 (783)
.++..++|++.-+|-.-.. .. +.+ -+.|..+.-.-.|++. -..+=..||.++++|.-....+...++
T Consensus 167 ~r~l~~~~V~aYvHYP~iS~DML~~l~qrq~s~~l~~~KlaY~rlFa~l---Y~~~G~~ad~vm~NssWT~nHI~qiW~- 242 (465)
T KOG1387|consen 167 FRRLRRIPVVAYVHYPTISTDMLKKLFQRQKSGILVWGKLAYWRLFALL---YQSAGSKADIVMTNSSWTNNHIKQIWQ- 242 (465)
T ss_pred HHHHccCceEEEEecccccHHHHHHHHhhhhcchhhhHHHHHHHHHHHH---HHhccccceEEEecchhhHHHHHHHhh-
Confidence 4557789999988842111 00 011 1222222111111111 123456899999999765544333321
Q ss_pred cccccccccccceeeeccCCCCCCcEEEecCCccCCCCCCCchHHHhhccCchhhHHhhcChhhhhhhhccccCCCCcEE
Q 003962 472 YESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEEKRRLKSFHPEIEELLYSDVENKEHLCVLKDRNKPIL 551 (783)
Q Consensus 472 y~~~~~f~~p~l~~v~~gi~~~~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~~~~~l~~~~~~~~~~gll~~~~k~iI 551 (783)
..+..+|.|.-+.+... ...+. ...+.+.+
T Consensus 243 ----------------------~~~~~iVyPPC~~e~lk---------------------------s~~~t-e~~r~~~l 272 (465)
T KOG1387|consen 243 ----------------------SNTCSIVYPPCSTEDLK---------------------------SKFGT-EGERENQL 272 (465)
T ss_pred ----------------------ccceeEEcCCCCHHHHH---------------------------HHhcc-cCCcceEE
Confidence 23556776655543111 11121 24566889
Q ss_pred EEEecccCCCCHHHHHHHHHHhHcc------CCCeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHHcCCCCcEEEccCCC
Q 003962 552 FTMARLDRVKNLTGLVEWYGKNAKL------RELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQM 625 (783)
Q Consensus 552 l~vGRL~~~Kgl~~LieA~~~l~~~------~~~~~LvIVG~g~~~~~~~~ee~~~~~~l~~li~~~~L~~~V~flG~~~ 625 (783)
+++|.+.|.||.. +++.++....+ .++++|+|||+-..+ +..+..+.|+.++++++++++|.|--
T Consensus 273 l~l~Q~RPEKnH~-~Lql~Al~~~~~pl~a~~~~iKL~ivGScRne-----eD~ervk~Lkd~a~~L~i~~~v~F~~--- 343 (465)
T KOG1387|consen 273 LSLAQFRPEKNHK-ILQLFALYLKNEPLEASVSPIKLIIVGSCRNE-----EDEERVKSLKDLAEELKIPKHVQFEK--- 343 (465)
T ss_pred EEEeecCcccccH-HHHHHHHHHhcCchhhccCCceEEEEeccCCh-----hhHHHHHHHHHHHHhcCCccceEEEe---
Confidence 9999999999999 66555444333 355899999998652 33456788999999999999999997
Q ss_pred CcCChHHHHHHHHccCcEEEeCCCCCCCcHHHHHHHHcCCcEEEcCcccc-cccccc---CceEEEECCCCHHHHHHHHH
Q 003962 626 NRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGP-AEIIVN---GKSGYHIDPYHGEQAAEILV 701 (783)
Q Consensus 626 ~~~~~~el~~~ia~aadvfV~PS~~E~fGltvlEAMa~GlPVVat~~GG~-~EiI~d---g~~G~li~p~d~e~lAeaI~ 701 (783)
.++.+++..++.. |.+.|+.-..|-||+.++|+||+|+-.|+-+.||+ -|||.+ ..+||+.. +.++.|++|.
T Consensus 344 -N~Py~~lv~lL~~-a~iGvh~MwNEHFGIsVVEyMAAGlIpi~h~SgGP~lDIV~~~~G~~tGFla~--t~~EYaE~iL 419 (465)
T KOG1387|consen 344 -NVPYEKLVELLGK-ATIGVHTMWNEHFGISVVEYMAAGLIPIVHNSGGPLLDIVTPWDGETTGFLAP--TDEEYAEAIL 419 (465)
T ss_pred -cCCHHHHHHHhcc-ceeehhhhhhhhcchhHHHHHhcCceEEEeCCCCCceeeeeccCCccceeecC--ChHHHHHHHH
Confidence 7889999999996 99999999999999999999999999999999998 566653 35899984 7889999999
Q ss_pred HHHHHhhCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Q 003962 702 DFFEKCKADPSYWDKISLGGLKRIEEKYTWKIYSQRLLTLT 742 (783)
Q Consensus 702 ~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~~~a~~ll~ly 742 (783)
+++. .|++.+..|.++||..+ .+|+=....+.+.+.+
T Consensus 420 kIv~---~~~~~r~~~r~~AR~s~-~RFsE~~F~kd~~~~i 456 (465)
T KOG1387|consen 420 KIVK---LNYDERNMMRRNARKSL-ARFGELKFDKDWENPI 456 (465)
T ss_pred HHHH---cCHHHHHHHHHHHHHHH-HHhhHHHHHHhHhHHH
Confidence 8875 78888999999999987 8898888887777553
No 93
>PLN03064 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=99.71 E-value=1.8e-15 Score=182.36 Aligned_cols=320 Identities=12% Similarity=0.114 Sum_probs=211.9
Q ss_pred HHHHHHcCCCceEEEEcCCCchHHHHHHHHhc-CCcEEEEecCCCccCCCCCchhhhhccccccccchhhHhHHhhhcCC
Q 003962 374 VEIAKELQGKPDLIIGNYSDGNIVASLLAHKL-GVTQCTIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTD 452 (783)
Q Consensus 374 ~~l~~~l~~~pDIIh~h~~~~~lva~llar~l-gvp~v~t~H~l~~~~~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~AD 452 (783)
..+....+ .-|+|..|.+...+++.++.++. ..++.+..|..++ .++++ ..+ -+-..-+..|-.||
T Consensus 223 ~~i~~~~~-~gD~VWVHDYHL~LlP~~LR~~~p~~~IGfFlHiPFP----s~Eif-r~L-------P~r~elL~glL~aD 289 (934)
T PLN03064 223 DVVNEHYE-EGDVVWCHDYHLMFLPKCLKEYNSNMKVGWFLHTPFP----SSEIH-RTL-------PSRSELLRSVLAAD 289 (934)
T ss_pred HHHHHhcC-CCCEEEEecchhhHHHHHHHHhCCCCcEEEEecCCCC----ChHHH-hhC-------CcHHHHHHHHhcCC
Confidence 33444433 34899999988878888887764 5788889997533 33322 111 11122344678999
Q ss_pred EEEcCCHHHHhhccccccccccccccccccceeeeccCCCCCC--cEEEecCCccCCCCCCCchHHHhhccCchhhHHhh
Q 003962 453 FIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDP--KFNIVSPGADMSIYFPYTEEKRRLKSFHPEIEELL 530 (783)
Q Consensus 453 ~IIt~S~~~~~~~~~~v~qy~~~~~f~~p~l~~v~~gi~~~~~--k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~~~~~l 530 (783)
.|=..|+..+..+......... +-....++..... ++.+.|-|||.+.|......... ++.
T Consensus 290 lIGFqT~~y~rhFl~~c~rlLg--------~~~~~~~v~~~Gr~v~V~~~PiGID~~~f~~~~~~~~v--------~~~- 352 (934)
T PLN03064 290 LVGFHTYDYARHFVSACTRILG--------LEGTPEGVEDQGRLTRVAAFPIGIDSDRFIRALETPQV--------QQH- 352 (934)
T ss_pred eEEeCCHHHHHHHHHHHHHHhC--------ccccCCeEEECCEEEEEEEEeCEEcHHHHHHHhcChhH--------HHH-
Confidence 9999998877655443221110 1111112222222 35678999999877543211110 000
Q ss_pred cChhhhhhhhccccCCCCcEEEEEecccCCCCHHHHHHHHHHhHccCCCeE--EEEE--eCCCCCCCccHHHHHHHHHHH
Q 003962 531 YSDVENKEHLCVLKDRNKPILFTMARLDRVKNLTGLVEWYGKNAKLRELVN--LVVV--GGDRRKESKDLEEQAEMKKMY 606 (783)
Q Consensus 531 ~~~~~~~~~~gll~~~~k~iIl~vGRL~~~Kgl~~LieA~~~l~~~~~~~~--LvIV--G~g~~~~~~~~ee~~~~~~l~ 606 (783)
....++.+ .++.+|++++|++..||+...++||+++.+.+|+++ ++++ .-... +...+......++.
T Consensus 353 --~~~lr~~~-----~g~kiIlgVDRLD~~KGI~~kL~AfE~fL~~~Pe~r~kVVLvQIa~psr--~~v~eY~~l~~~V~ 423 (934)
T PLN03064 353 --IKELKERF-----AGRKVMLGVDRLDMIKGIPQKILAFEKFLEENPEWRDKVVLLQIAVPTR--TDVPEYQKLTSQVH 423 (934)
T ss_pred --HHHHHHHh-----CCceEEEEeeccccccCHHHHHHHHHHHHHhCccccCCEEEEEEcCCCC--CCcHHHHHHHHHHH
Confidence 01122222 356799999999999999999999999988888754 4444 32211 11123333444455
Q ss_pred HHHHHcCC-CCc-----EEEccCCCCcCChHHHHHHHHccCcEEEeCCCCCCCcHHHHHHHHcCC----cEEEcCccccc
Q 003962 607 SLIDQYKL-NGQ-----FRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGL----PTFATCKGGPA 676 (783)
Q Consensus 607 ~li~~~~L-~~~-----V~flG~~~~~~~~~el~~~ia~aadvfV~PS~~E~fGltvlEAMa~Gl----PVVat~~GG~~ 676 (783)
+++.+.+- .+. |.++. ..++.+++..+|+. +|+++.||..||++++..|||+|+. ++|.|..+|.+
T Consensus 424 ~~V~rIN~~fg~~~w~Pv~~~~---~~l~~eeL~AlY~~-ADV~lvTslrDGmNLva~Eyva~~~~~~GvLILSEfaGaa 499 (934)
T PLN03064 424 EIVGRINGRFGTLTAVPIHHLD---RSLDFHALCALYAV-TDVALVTSLRDGMNLVSYEFVACQDSKKGVLILSEFAGAA 499 (934)
T ss_pred HHHHHHhhhccCCCcceEEEec---cCCCHHHHHHHHHh-CCEEEeCccccccCchHHHHHHhhcCCCCCeEEeCCCchH
Confidence 55554331 112 45443 24788999999995 9999999999999999999999944 44448899988
Q ss_pred cccccCceEEEECCCCHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Q 003962 677 EIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEEKYTWKIYSQRLLTLT 742 (783)
Q Consensus 677 EiI~dg~~G~li~p~d~e~lAeaI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~~~a~~ll~ly 742 (783)
+.+ +..+++++|.|++++|++|.++++ .+++.+++..+++++++ ..+||...++.+++-.
T Consensus 500 ~~L--~~~AllVNP~D~~~vA~AI~~AL~---M~~~Er~~r~~~~~~~V-~~~d~~~Wa~~fl~~L 559 (934)
T PLN03064 500 QSL--GAGAILVNPWNITEVAASIAQALN---MPEEEREKRHRHNFMHV-TTHTAQEWAETFVSEL 559 (934)
T ss_pred HHh--CCceEEECCCCHHHHHHHHHHHHh---CCHHHHHHHHHHHHhhc-ccCCHHHHHHHHHHHH
Confidence 887 446999999999999999988773 48999999999999998 7899999999977633
No 94
>TIGR03713 acc_sec_asp1 accessory Sec system protein Asp1. This protein is designated Asp1 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown.
Probab=99.69 E-value=4.6e-15 Score=171.46 Aligned_cols=169 Identities=12% Similarity=0.145 Sum_probs=146.4
Q ss_pred CcEEEEEe--cccCCCCHHHHHHHHHHhHccCCCeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHHcCCC----------
Q 003962 548 KPILFTMA--RLDRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLN---------- 615 (783)
Q Consensus 548 k~iIl~vG--RL~~~Kgl~~LieA~~~l~~~~~~~~LvIVG~g~~~~~~~~ee~~~~~~l~~li~~~~L~---------- 615 (783)
+..+++++ || +.|.++.+++++.++....|++.|.+.|.+.+. ...+.++++++++++.
T Consensus 319 ~~~~I~v~idrL-~ek~~~~~I~av~~~~~~~p~~~L~~~gy~~~~--------~~~~~l~~~i~~~~~~~~~~~~~~~~ 389 (519)
T TIGR03713 319 YETEIGFWIDGL-SDEELQQILQQLLQYILKNPDYELKILTYNNDN--------DITQLLEDILEQINEEYNQDKNFFSL 389 (519)
T ss_pred cceEEEEEcCCC-ChHHHHHHHHHHHHHHhhCCCeEEEEEEecCch--------hHHHHHHHHHHHHHhhhchhhhcccc
Confidence 34678888 99 999999999999999999999999999988531 1235666777777665
Q ss_pred -------------------CcEEEccCCCCcCChHHHHHHHHccCcEEEeCCCCCCCcHHHHHHHHcCCcEEEcCccccc
Q 003962 616 -------------------GQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPA 676 (783)
Q Consensus 616 -------------------~~V~flG~~~~~~~~~el~~~ia~aadvfV~PS~~E~fGltvlEAMa~GlPVVat~~GG~~ 676 (783)
.+|.|.| ..+..++.+.+.+ +.++|.+|..|+|+ +.+||+++|+|+| .-|+.
T Consensus 390 ~~~~~~~~~~~~~~~~~~~~~v~f~g----y~~e~dl~~~~~~-arl~id~s~~eg~~-~~ieAiS~GiPqI---nyg~~ 460 (519)
T TIGR03713 390 SEQDENQPILQTDEEQKEKERIAFTT----LTNEEDLISALDK-LRLIIDLSKEPDLY-TQISGISAGIPQI---NKVET 460 (519)
T ss_pred chhhhhhhcccchhhcccccEEEEEe----cCCHHHHHHHHhh-heEEEECCCCCChH-HHHHHHHcCCCee---ecCCc
Confidence 7899999 4444578888986 89999999999999 9999999999999 44679
Q ss_pred cccccCceEEEECCCCHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHH
Q 003962 677 EIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEEKYTWKIYSQRLLTL 741 (783)
Q Consensus 677 EiI~dg~~G~li~p~d~e~lAeaI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~~~a~~ll~l 741 (783)
++|.||+||+++ +|.++++++|..+| .++..|++++..+.+.+ ++||-+.+.++|.++
T Consensus 461 ~~V~d~~NG~li--~d~~~l~~al~~~L----~~~~~wn~~~~~sy~~~-~~yS~~~i~~kW~~~ 518 (519)
T TIGR03713 461 DYVEHNKNGYII--DDISELLKALDYYL----DNLKNWNYSLAYSIKLI-DDYSSENIIERLNEL 518 (519)
T ss_pred eeeEcCCCcEEe--CCHHHHHHHHHHHH----hCHHHHHHHHHHHHHHH-HHhhHHHHHHHHHhh
Confidence 999999999999 59999999997776 89999999999999998 899999999988764
No 95
>KOG2941 consensus Beta-1,4-mannosyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.67 E-value=1.8e-14 Score=151.70 Aligned_cols=376 Identities=13% Similarity=0.108 Sum_probs=238.1
Q ss_pred HHHHHHCCCceeeceeEEeCCCCCCCCCcccceeeeecCccCeEEEEeccCCCccccccccccccchhhHHHHHHHHHH-
Q 003962 296 LLRIKQQGLDITPQILIITRLLPDAVGTTCGQRLEKVYGTKYSDILRVPFRTEKGVVRKWISRFEVWPYLETYTEDVAV- 374 (783)
Q Consensus 296 a~~L~~~GheV~~~i~VvT~~~~~~~g~~~~~~~e~i~~~~~v~Ilrvp~~~~~~~~~~~isr~~i~~~l~~f~~~~~~- 374 (783)
|..|++.|++|+ ++.-..+. +.+.+-.-++++|+.+|--+.....++ .-. --+..|.....-
T Consensus 33 A~Sla~~gf~Vd----liGy~~s~--------p~e~l~~hprI~ih~m~~l~~~~~~p~----~~~-l~lKvf~Qfl~Ll 95 (444)
T KOG2941|consen 33 ALSLAKLGFQVD----LIGYVESI--------PLEELLNHPRIRIHGMPNLPFLQGGPR----VLF-LPLKVFWQFLSLL 95 (444)
T ss_pred HHHHHHcCCeEE----EEEecCCC--------ChHHHhcCCceEEEeCCCCcccCCCch----hhh-hHHHHHHHHHHHH
Confidence 445789999999 66433211 223334456789988876554322211 111 111222221111
Q ss_pred HHHHHcCCCceEEEEcCCCc---hHHHHHHHHhcCCcEEEEecCCCcc-CCCCCchhhhhccccccccchhhHhHHhhhc
Q 003962 375 EIAKELQGKPDLIIGNYSDG---NIVASLLAHKLGVTQCTIAHALEKT-KYPDSDIYWKNLDDKYHFSCQFTADLIAMNH 450 (783)
Q Consensus 375 ~l~~~l~~~pDIIh~h~~~~---~lva~llar~lgvp~v~t~H~l~~~-~~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~ 450 (783)
..+.. .+.||+|....+++ -.++.+++...|.+++++.|++..+ ....+ ......-. .+....|...-+.
T Consensus 96 ~aL~~-~~~~~~ilvQNPP~iPtliv~~~~~~l~~~KfiIDWHNy~Ysl~l~~~---~g~~h~lV--~l~~~~E~~fgk~ 169 (444)
T KOG2941|consen 96 WALFV-LRPPDIILVQNPPSIPTLIVCVLYSILTGAKFIIDWHNYGYSLQLKLK---LGFQHPLV--RLVRWLEKYFGKL 169 (444)
T ss_pred HHHHh-ccCCcEEEEeCCCCCchHHHHHHHHHHhcceEEEEehhhHHHHHHHhh---cCCCCchH--HHHHHHHHHhhcc
Confidence 11111 35899999877765 3577777788899999999997654 11000 00000011 1122346677889
Q ss_pred CCEEEcCCHHHHhhccccccccccccccccccceeeeccCCCCCCcEEEec---C--CccCC----CCCCCch----HHH
Q 003962 451 TDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVS---P--GADMS----IYFPYTE----EKR 517 (783)
Q Consensus 451 AD~IIt~S~~~~~~~~~~v~qy~~~~~f~~p~l~~v~~gi~~~~~k~~VIp---n--GvD~~----~f~p~~~----~~~ 517 (783)
||.-.|+|..+.+.+.+.+|- . +..|++ + +.+.+ .|-+... -..
T Consensus 170 a~~nLcVT~AMr~dL~qnWgi-------------------~----ra~v~YDrPps~~~~l~~~H~lf~~l~~d~~~f~a 226 (444)
T KOG2941|consen 170 ADYNLCVTKAMREDLIQNWGI-------------------N----RAKVLYDRPPSKPTPLDEQHELFMKLAGDHSPFRA 226 (444)
T ss_pred cccchhhHHHHHHHHHHhcCC-------------------c----eeEEEecCCCCCCCchhHHHHHHhhhccccchhhh
Confidence 999999999988765555431 1 111211 1 11111 1222111 011
Q ss_pred hhccCchhhHHhhcChhhhhhhhccccCCCCcEEEEEecccCCCCHHHHHHHHHHhHc-------cCCCeEEEEEeCCCC
Q 003962 518 RLKSFHPEIEELLYSDVENKEHLCVLKDRNKPILFTMARLDRVKNLTGLVEWYGKNAK-------LRELVNLVVVGGDRR 590 (783)
Q Consensus 518 r~~~~~~~~~~~l~~~~~~~~~~gll~~~~k~iIl~vGRL~~~Kgl~~LieA~~~l~~-------~~~~~~LvIVG~g~~ 590 (783)
| ....+.++..+|..-+...-.-. ......++++....++..++..|++|+..-.+ ..|..-++|-|.||.
T Consensus 227 r-~~q~~~~~~taf~~k~~s~~v~~-~~~~pallvsSTswTpDEdf~ILL~AL~~y~~~~~~~~~~lP~llciITGKGPl 304 (444)
T KOG2941|consen 227 R-EPQDKALERTAFTKKDASGDVQL-LPERPALLVSSTSWTPDEDFGILLEALVIYEEQLYDKTHNLPSLLCIITGKGPL 304 (444)
T ss_pred c-ccccchhhhhhHhhhcccchhhh-ccCCCeEEEecCCCCCcccHHHHHHHHHhhhhhhhhccCCCCcEEEEEcCCCch
Confidence 1 11123444455544333111111 13344567888889999999999999984322 247777888888976
Q ss_pred CCCccHHHHHHHHHHHHHHHHcCCCCcEEEccCCCCcCChHHHHHHHHccCcEEEeC--CC-CCCCcHHHHHHHHcCCcE
Q 003962 591 KESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQP--AL-YEAFGLTVVEAMTCGLPT 667 (783)
Q Consensus 591 ~~~~~~ee~~~~~~l~~li~~~~L~~~V~flG~~~~~~~~~el~~~ia~aadvfV~P--S~-~E~fGltvlEAMa~GlPV 667 (783)
.+++.+.++++++. +|.+.- .+...++...+++ ++|+.|+- |. .=..|++|+....||+||
T Consensus 305 -----------kE~Y~~~I~~~~~~-~v~~~t---pWL~aEDYP~ll~-saDlGVcLHtSSSGLDLPMKVVDMFGcglPv 368 (444)
T KOG2941|consen 305 -----------KEKYSQEIHEKNLQ-HVQVCT---PWLEAEDYPKLLA-SADLGVCLHTSSSGLDLPMKVVDMFGCGLPV 368 (444)
T ss_pred -----------hHHHHHHHHHhccc-ceeeee---cccccccchhHhh-ccccceEeeecCcccCcchhHHHhhcCCCce
Confidence 36778889998884 566654 3777888888888 49977763 33 334899999999999999
Q ss_pred EEcCccccccccccCceEEEECCCCHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHH
Q 003962 668 FATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEEKYTWKIYSQRLL 739 (783)
Q Consensus 668 Vat~~GG~~EiI~dg~~G~li~p~d~e~lAeaI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~~~a~~ll 739 (783)
+|-+...+.|+|+||+||++|+ |.+++|+++..+++..-.|.+..+++.+++++. +.+.|+..-++..
T Consensus 369 cA~~fkcl~ELVkh~eNGlvF~--Ds~eLa~ql~~lf~~fp~~a~~l~~lkkn~~e~--~e~RW~~~W~~~~ 436 (444)
T KOG2941|consen 369 CAVNFKCLDELVKHGENGLVFE--DSEELAEQLQMLFKNFPDNADELNQLKKNLREE--QELRWDESWERTA 436 (444)
T ss_pred eeecchhHHHHHhcCCCceEec--cHHHHHHHHHHHHhcCCCCHHHHHHHHHhhHHH--HhhhHHHHHHHhh
Confidence 9999999999999999999998 899999999999987777999999999999987 5677776655544
No 96
>PF13692 Glyco_trans_1_4: Glycosyl transferases group 1; PDB: 3OY2_A 3OY7_B 2Q6V_A 2HY7_A 3CV3_A 3CUY_A.
Probab=99.58 E-value=4.9e-15 Score=140.30 Aligned_cols=130 Identities=21% Similarity=0.282 Sum_probs=96.4
Q ss_pred CcEEEEEecccCCCCHHHHHH-HHHHhHccCCCeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHHcCCCCcEEEccCCCC
Q 003962 548 KPILFTMARLDRVKNLTGLVE-WYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMN 626 (783)
Q Consensus 548 k~iIl~vGRL~~~Kgl~~Lie-A~~~l~~~~~~~~LvIVG~g~~~~~~~~ee~~~~~~l~~li~~~~L~~~V~flG~~~~ 626 (783)
.++|+++|++.+.||++.+++ ++.++.+..|++.|+|+|++++ +++++ ..++|+|+|
T Consensus 2 ~~~i~~~g~~~~~k~~~~li~~~~~~l~~~~p~~~l~i~G~~~~-------------~l~~~-----~~~~v~~~g---- 59 (135)
T PF13692_consen 2 ILYIGYLGRIRPDKGLEELIEAALERLKEKHPDIELIIIGNGPD-------------ELKRL-----RRPNVRFHG---- 59 (135)
T ss_dssp -EEEE--S-SSGGGTHHHHHH-HHHHHHHHSTTEEEEEECESS--------------HHCCH-----HHCTEEEE-----
T ss_pred cccccccccccccccccchhhhHHHHHHHHCcCEEEEEEeCCHH-------------HHHHh-----cCCCEEEcC----
Confidence 357999999999999999999 9999999899999999999863 12222 235899999
Q ss_pred cCChHHHHHHHHccCcEEEeCCC-CCCCcHHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHHHHHHHHHHHH
Q 003962 627 RVRNGELYRYICDTKGAFVQPAL-YEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFF 704 (783)
Q Consensus 627 ~~~~~el~~~ia~aadvfV~PS~-~E~fGltvlEAMa~GlPVVat~~GG~~EiI~dg~~G~li~p~d~e~lAeaI~~~l 704 (783)
++ +++..+++. +|+++.|+. .++++.+++|||++|+|||+++. +..+++.....|.++ ++|+++++++|.+++
T Consensus 60 ~~--~e~~~~l~~-~dv~l~p~~~~~~~~~k~~e~~~~G~pvi~~~~-~~~~~~~~~~~~~~~-~~~~~~l~~~i~~l~ 133 (135)
T PF13692_consen 60 FV--EELPEILAA-ADVGLIPSRFNEGFPNKLLEAMAAGKPVIASDN-GAEGIVEEDGCGVLV-ANDPEELAEAIERLL 133 (135)
T ss_dssp S---HHHHHHHHC--SEEEE-BSS-SCC-HHHHHHHCTT--EEEEHH-HCHCHS---SEEEE--TT-HHHHHHHHHHHH
T ss_pred CH--HHHHHHHHh-CCEEEEEeeCCCcCcHHHHHHHHhCCCEEECCc-chhhheeecCCeEEE-CCCHHHHHHHHHHHh
Confidence 55 589999996 999999986 67899999999999999999988 577777656677777 889999999997765
No 97
>PF05693 Glycogen_syn: Glycogen synthase; InterPro: IPR008631 This family consists of the eukaryotic glycogen synthase proteins GYS1, GYS2 and GYS3. Glycogen synthase (GS) is the enzyme responsible for the synthesis of -1,4-linked glucose chains in glycogen. It is the rate limiting enzyme in the synthesis of the polysaccharide, and its activity is highly regulated through phosphorylation at multiple sites and also by allosteric effectors, mainly glucose 6-phosphate (G6P) [].; GO: 0004373 glycogen (starch) synthase activity, 0005978 glycogen biosynthetic process; PDB: 3NB0_C 3RT1_C 3RSZ_D 3O3C_B 3NAZ_B 3NCH_D.
Probab=99.56 E-value=1.7e-13 Score=155.56 Aligned_cols=332 Identities=15% Similarity=0.145 Sum_probs=181.6
Q ss_pred CceEEEEcCCCchHHHHHHHH-hcCCcEEEEecCCCccCCC---CCchh-------hhhccccccccchhhHhHHhhhcC
Q 003962 383 KPDLIIGNYSDGNIVASLLAH-KLGVTQCTIAHALEKTKYP---DSDIY-------WKNLDDKYHFSCQFTADLIAMNHT 451 (783)
Q Consensus 383 ~pDIIh~h~~~~~lva~llar-~lgvp~v~t~H~l~~~~~~---~s~~~-------~~~~~~~y~f~~~~~~e~~a~~~A 451 (783)
+.-|.|+|-|..+....++.+ ...|..|+|.|+.-...+. ..++| +......+....+...|+.+.+.|
T Consensus 143 ~~ViaHfHEWmaG~gll~lr~~~~~VaTvFTTHAT~lGR~l~~~~~~~Y~~L~~~~~d~eA~~~~i~~k~~iEraaA~~A 222 (633)
T PF05693_consen 143 PKVIAHFHEWMAGVGLLYLRKRKPDVATVFTTHATLLGRYLAANNKDFYNNLDKFNGDQEAGERNIYHKHSIERAAAHYA 222 (633)
T ss_dssp EEEEEEEESGGGTTHHHHHHHTT-SCEEEEEESS-HHHHHHTTTSS-TTTSGTTS-HHHHHHHTT-HHHHHHHHHHHHHS
T ss_pred CcEEEEechHhHhHHHHHHhccCCCeeEEEEecccchhhHhhcCCCcHHHHhhccCccccccCccchHHHHHHHHHHHhc
Confidence 455778999987554443333 3467789999984322211 11111 222223344444566788899999
Q ss_pred CEEEcCCHHHHhhccccccccccccccccccceeeeccCCCCCCcEEEecCCccCCCCCCCchHHHhhccCchhhHHhhc
Q 003962 452 DFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEEKRRLKSFHPEIEELLY 531 (783)
Q Consensus 452 D~IIt~S~~~~~~~~~~v~qy~~~~~f~~p~l~~v~~gi~~~~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~~~~~l~ 531 (783)
|+..|+|+-.+...+..++ ...=.|+|||+|.+.|....+.+.....-..+|.+.+-
T Consensus 223 dvFTTVSeITa~Ea~~LL~-----------------------r~pDvV~pNGl~v~~~~~~~efqnl~~~~k~ki~~fv~ 279 (633)
T PF05693_consen 223 DVFTTVSEITAKEAEHLLK-----------------------RKPDVVTPNGLNVDKFPALHEFQNLHAKAKEKIHEFVR 279 (633)
T ss_dssp SEEEESSHHHHHHHHHHHS-----------------------S--SEE----B-GGGTSSTTHHHHHHHHHHHHHHHHHH
T ss_pred CeeeehhhhHHHHHHHHhC-----------------------CCCCEEcCCCccccccccchHHHHHHHHHHHHHHHHHH
Confidence 9999999877665443321 11225889999998776554433221111233333221
Q ss_pred ChhhhhhhhccccCCCCcEEEEEeccc-CCCCHHHHHHHHHHhHcc----CCC---eEEEEEeCCCCCCCccHHHH----
Q 003962 532 SDVENKEHLCVLKDRNKPILFTMARLD-RVKNLTGLVEWYGKNAKL----REL---VNLVVVGGDRRKESKDLEEQ---- 599 (783)
Q Consensus 532 ~~~~~~~~~gll~~~~k~iIl~vGRL~-~~Kgl~~LieA~~~l~~~----~~~---~~LvIVG~g~~~~~~~~ee~---- 599 (783)
+ .+..++.+ .+++..+|+..||.. +.||++.+|||++++... ..+ +-|+|+=..-.... .|..
T Consensus 280 ~--~f~g~~df-d~d~tl~~ftsGRYEf~NKG~D~fieAL~rLn~~lk~~~~~~tVVaFii~pa~~~~~~--ve~l~~~a 354 (633)
T PF05693_consen 280 G--HFYGHYDF-DLDKTLYFFTSGRYEFRNKGIDVFIEALARLNHRLKQAGSDKTVVAFIIVPAKTNSFN--VESLKGQA 354 (633)
T ss_dssp H--HSTT---S--GGGEEEEEEESSS-TTTTTHHHHHHHHHHHHHHHHHTT-S-EEEEEEE---SEEEE---HHHHHHHH
T ss_pred H--HhcccCCC-CccceEEEEeeeceeeecCCccHHHHHHHHHHHHHhhcCCCCeEEEEEEecCccCCcC--HHHHhhHH
Confidence 0 01111222 123456788999998 789999999999998531 222 22444433211100 0000
Q ss_pred ------------------------------------------------------------------HHHHHHHHHHHHcC
Q 003962 600 ------------------------------------------------------------------AEMKKMYSLIDQYK 613 (783)
Q Consensus 600 ------------------------------------------------------------------~~~~~l~~li~~~~ 613 (783)
...+.+-..+++.+
T Consensus 355 ~~~~l~~t~~~i~~~~g~~~~~~~~~~~~p~~~~~~~~~~~~~lkr~i~~~~r~~lPPi~TH~l~d~~~DpILn~irr~~ 434 (633)
T PF05693_consen 355 VTKQLRDTVDEIQEKIGKRLFESCLSGRLPDLNELLDKEDIVRLKRCIFALQRNSLPPITTHNLHDDSNDPILNMIRRLG 434 (633)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHSSS-SHHHCS-HHHHHHHHHHHHTT--T----SBSEEETTTTT-HHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCCCCChHHhcChhhHHHHHHHHHHhccCCCCCeeeeCCCCCccCHHHHHHHhCC
Confidence 01223334444555
Q ss_pred CC----Cc--EEEcc---CCCCcCChHHHHHHHHccCcEEEeCCCCCCCcHHHHHHHHcCCcEEEcCcccccccccc---
Q 003962 614 LN----GQ--FRWIS---SQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVN--- 681 (783)
Q Consensus 614 L~----~~--V~flG---~~~~~~~~~el~~~ia~aadvfV~PS~~E~fGltvlEAMa~GlPVVat~~GG~~EiI~d--- 681 (783)
+. ++ |.|++ ...|.+-+-+.+.+++. +|+.|+||+||++|.|-+|+.++|+|.|+|+..|....+++
T Consensus 435 L~N~~~drVKVIF~P~yL~~~dgif~l~Y~dfv~G-cdLgvFPSYYEPWGYTPlE~~a~gVPsITTnLsGFG~~~~~~~~ 513 (633)
T PF05693_consen 435 LFNNPEDRVKVIFHPEYLSGTDGIFNLDYYDFVRG-CDLGVFPSYYEPWGYTPLECTAFGVPSITTNLSGFGCWMQEHIE 513 (633)
T ss_dssp ----TT-SEEEEE--S---TTSSSS-S-HHHHHHH-SSEEEE--SSBSS-HHHHHHHHTT--EEEETTBHHHHHHHTTS-
T ss_pred CCCCCCCceEEEEeeccccCCCCCCCCCHHHHhcc-CceeeeccccccccCChHHHhhcCCceeeccchhHHHHHHHhhc
Confidence 53 23 45554 12234445567777774 99999999999999999999999999999999998765542
Q ss_pred --CceEEEE-C--CCCHHHHHHHHHHHHHHhhC-CHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Q 003962 682 --GKSGYHI-D--PYHGEQAAEILVDFFEKCKA-DPSYWDKISLGGLKRIEEKYTWKIYSQRLLTLTGV 744 (783)
Q Consensus 682 --g~~G~li-~--p~d~e~lAeaI~~~l~~l~~-dp~~~~~ms~~a~~~v~~~ysw~~~a~~ll~ly~~ 744 (783)
...|+.+ + -.+.++.+++|.+.+..... ++..+..+..++.+. .+..+|+....-|.+.|..
T Consensus 514 ~~~~~GV~VvdR~~~n~~e~v~~la~~l~~f~~~~~rqri~~Rn~ae~L-S~~~dW~~~~~yY~~Ay~~ 581 (633)
T PF05693_consen 514 DPEEYGVYVVDRRDKNYDESVNQLADFLYKFCQLSRRQRIIQRNRAERL-SDLADWKNFGKYYEKAYDL 581 (633)
T ss_dssp HHGGGTEEEE-SSSS-HHHHHHHHHHHHHHHHT--HHHHHHHHHHHHHH-GGGGBHHHHCHHHHHHHHH
T ss_pred cCcCCcEEEEeCCCCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH-HHhCCHHHHHHHHHHHHHH
Confidence 3456543 3 34788888888777655444 555666666666554 4889999999999988765
No 98
>TIGR00215 lpxB lipid-A-disaccharide synthase. Lipid-A precursor biosynthesis producing lipid A disaccharide in a condensation reaction. transcribed as part of an operon including lpxA
Probab=99.53 E-value=1.8e-12 Score=145.57 Aligned_cols=251 Identities=15% Similarity=0.089 Sum_probs=155.8
Q ss_pred CCceEEEEcCCCc-hHHHHHHHHhcCCcEEEEecCCCccCCCCCchhhhhccccccccchhhHhHHhhhcCCEEEcCCHH
Q 003962 382 GKPDLIIGNYSDG-NIVASLLAHKLGVTQCTIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTFQ 460 (783)
Q Consensus 382 ~~pDIIh~h~~~~-~lva~llar~lgvp~v~t~H~l~~~~~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~ 460 (783)
.+||+|++....+ ++.....++.+|+|+++.+. . .-+.|.... -+...+.+|.|+++++.
T Consensus 88 ~kPd~vi~~g~~~~~~~~a~aa~~~gip~v~~i~-P-------~~waw~~~~-----------~r~l~~~~d~v~~~~~~ 148 (385)
T TIGR00215 88 AKPDLLVGIDAPDFNLTKELKKKDPGIKIIYYIS-P-------QVWAWRKWR-----------AKKIEKATDFLLAILPF 148 (385)
T ss_pred cCCCEEEEeCCCCccHHHHHHHhhCCCCEEEEeC-C-------cHhhcCcch-----------HHHHHHHHhHhhccCCC
Confidence 5899999877644 55555678889999875431 1 112232211 22456789999999977
Q ss_pred HHhhccccccccccccccccccceeeeccCCCCCCcEEEecCCccCCCCCCCchHHHhhccCchhhHHhhcChhhhhhhh
Q 003962 461 EIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEEKRRLKSFHPEIEELLYSDVENKEHL 540 (783)
Q Consensus 461 ~~~~~~~~v~qy~~~~~f~~p~l~~v~~gi~~~~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~~~~~l~~~~~~~~~~ 540 (783)
+.+.+++ + ..+..++.|++-.+........ ...++.+
T Consensus 149 e~~~~~~--------------------~-----g~~~~~vGnPv~~~~~~~~~~~------------------~~~r~~l 185 (385)
T TIGR00215 149 EKAFYQK--------------------K-----NVPCRFVGHPLLDAIPLYKPDR------------------KSAREKL 185 (385)
T ss_pred cHHHHHh--------------------c-----CCCEEEECCchhhhccccCCCH------------------HHHHHHc
Confidence 6552111 0 2245567776633221110111 1123456
Q ss_pred ccccCCCCcEEEEEe--cccC-CCCHHHHHHHHHHhHccCCCeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHHcCCCCc
Q 003962 541 CVLKDRNKPILFTMA--RLDR-VKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLNGQ 617 (783)
Q Consensus 541 gll~~~~k~iIl~vG--RL~~-~Kgl~~LieA~~~l~~~~~~~~LvIVG~g~~~~~~~~ee~~~~~~l~~li~~~~L~~~ 617 (783)
|+ ++++++|+.+| |..+ .|++..+++++..+.+..|++++++++.+.. ..+.++++.+.++...+
T Consensus 186 gl--~~~~~~Ilvl~GSR~aei~k~~~~ll~a~~~l~~~~p~~~~vi~~~~~~----------~~~~~~~~~~~~~~~~~ 253 (385)
T TIGR00215 186 GI--DHNGETLALLPGSRGSEVEKLFPLFLKAAQLLEQQEPDLRRVLPVVNFK----------RRLQFEQIKAEYGPDLQ 253 (385)
T ss_pred CC--CCCCCEEEEECCCCHHHHHHhHHHHHHHHHHHHHhCCCeEEEEEeCCch----------hHHHHHHHHHHhCCCCc
Confidence 76 66777776653 7776 7899999999999988888999877654421 12345555666666667
Q ss_pred EEEccCCCCcCChHHHHHHHHccCcEEEeCCCCCCCcHHHHHHHHcCCcEEEcC-cc----------------ccccccc
Q 003962 618 FRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATC-KG----------------GPAEIIV 680 (783)
Q Consensus 618 V~flG~~~~~~~~~el~~~ia~aadvfV~PS~~E~fGltvlEAMa~GlPVVat~-~G----------------G~~EiI~ 680 (783)
|.+.+ .+...+|+ ++|++|.+| |.+.+|||+||+|+|.+. .. +.+.++.
T Consensus 254 v~~~~--------~~~~~~l~-aADl~V~~S-----Gt~tlEa~a~G~P~Vv~yk~~pl~~~~~~~~~~~~~~~~~nil~ 319 (385)
T TIGR00215 254 LHLID--------GDARKAMF-AADAALLAS-----GTAALEAALIKTPMVVGYRMKPLTFLIARRLVKTDYISLPNILA 319 (385)
T ss_pred EEEEC--------chHHHHHH-hCCEEeecC-----CHHHHHHHHcCCCEEEEEcCCHHHHHHHHHHHcCCeeeccHHhc
Confidence 77765 13456777 599999999 878889999999999872 11 1222232
Q ss_pred cCceEE-EE-CCCCHHHHHHHHHHHHHHhhCCH----HHHHHHHHHHHHH
Q 003962 681 NGKSGY-HI-DPYHGEQAAEILVDFFEKCKADP----SYWDKISLGGLKR 724 (783)
Q Consensus 681 dg~~G~-li-~p~d~e~lAeaI~~~l~~l~~dp----~~~~~ms~~a~~~ 724 (783)
+..... ++ +.-+++.+++.+.+++ .|+ +.++++.+.-.+.
T Consensus 320 ~~~~~pel~q~~~~~~~l~~~~~~ll----~~~~~~~~~~~~~~~~~~~~ 365 (385)
T TIGR00215 320 NRLLVPELLQEECTPHPLAIALLLLL----ENGLKAYKEMHRERQFFEEL 365 (385)
T ss_pred CCccchhhcCCCCCHHHHHHHHHHHh----cCCcccHHHHHHHHHHHHHH
Confidence 221111 11 2346888888886655 888 8777776655443
No 99
>PF13524 Glyco_trans_1_2: Glycosyl transferases group 1
Probab=99.37 E-value=3.6e-12 Score=113.31 Aligned_cols=92 Identities=22% Similarity=0.397 Sum_probs=85.2
Q ss_pred EEEeCCCCCCCcHHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHHHHHHHHHHHHHHhhCCHHHHHHHHHHHH
Q 003962 643 AFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGL 722 (783)
Q Consensus 643 vfV~PS~~E~fGltvlEAMa~GlPVVat~~GG~~EiI~dg~~G~li~p~d~e~lAeaI~~~l~~l~~dp~~~~~ms~~a~ 722 (783)
+++.|+...++++.++|+||||+|||+++.++..+++.+|..++.++ |++++++++..++ +||+.+++++++|+
T Consensus 1 i~Ln~~~~~~~~~r~~E~~a~G~~vi~~~~~~~~~~~~~~~~~~~~~--~~~el~~~i~~ll----~~~~~~~~ia~~a~ 74 (92)
T PF13524_consen 1 INLNPSRSDGPNMRIFEAMACGTPVISDDSPGLREIFEDGEHIITYN--DPEELAEKIEYLL----ENPEERRRIAKNAR 74 (92)
T ss_pred CEeeCCCCCCCchHHHHHHHCCCeEEECChHHHHHHcCCCCeEEEEC--CHHHHHHHHHHHH----CCHHHHHHHHHHHH
Confidence 35678888999999999999999999999999999999999999998 9999999996555 89999999999999
Q ss_pred HHHHHhCCHHHHHHHHHH
Q 003962 723 KRIEEKYTWKIYSQRLLT 740 (783)
Q Consensus 723 ~~v~~~ysw~~~a~~ll~ 740 (783)
+.+.++|||+..++++++
T Consensus 75 ~~v~~~~t~~~~~~~il~ 92 (92)
T PF13524_consen 75 ERVLKRHTWEHRAEQILE 92 (92)
T ss_pred HHHHHhCCHHHHHHHHHC
Confidence 999999999999999863
No 100
>PF00982 Glyco_transf_20: Glycosyltransferase family 20; InterPro: IPR001830 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 20 GT20 from CAZY comprises enzymes with only one known activity; alpha, alpha-trehalose-phosphate synthase [UDP-forming] (2.4.1.15 from EC). Synthesis of trehalose in the yeast Saccharomyces cerevisiae is catalysed by the trehalose-6-phosphate (Tre6P) synthase/phosphatase complex, which is composed of at least three different subunits encoded by the genes TPS1, TPS2, and TSL1. Tps1 and Tps2 carry the catalytic activities of trehalose synthesis, namely Tre6P synthase (Tps1) and Tre6P phosphatase (Tps2), while TsI1 has regulatory functions. There is some evidence that TsI1 and Tps3 may share a common function with respect to regulation and/or structural stabilisation of the Tre6P synthase/phosphatase complex in exponentially growing, heat-shocked cells []. OtsA (trehalose-6-phosphate synthase) from Escherichia coli has homology to the full-length TPS1, the N-terminal part of TPS2 and an internal region of TPS3 (TSL1) of yeast [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1UQU_A 2WTX_A 1UQT_B 1GZ5_B.
Probab=99.32 E-value=8.6e-11 Score=134.41 Aligned_cols=313 Identities=14% Similarity=0.131 Sum_probs=179.1
Q ss_pred CceEEEEcCCCchHHHHHHHHhc-CCcEEEEecCCCccCCCCCchhhhhccccccccchhhHhHHhhhcCCEEEcCCHHH
Q 003962 383 KPDLIIGNYSDGNIVASLLAHKL-GVTQCTIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTFQE 461 (783)
Q Consensus 383 ~pDIIh~h~~~~~lva~llar~l-gvp~v~t~H~l~~~~~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~ 461 (783)
.-|+|-.|...-.+++.++.++. +.++.+..|..++ .+++ ++.+ .....-+..|-.||.|-..|+..
T Consensus 141 ~~D~VWVhDYhL~llP~~LR~~~~~~~IgfFlHiPFP----s~e~-fr~l-------P~r~eiL~glL~aDlIgFqt~~~ 208 (474)
T PF00982_consen 141 PGDLVWVHDYHLMLLPQMLRERGPDARIGFFLHIPFP----SSEI-FRCL-------PWREEILRGLLGADLIGFQTFEY 208 (474)
T ss_dssp TT-EEEEESGGGTTHHHHHHHTT--SEEEEEE-S--------HHH-HTTS-------TTHHHHHHHHTTSSEEEESSHHH
T ss_pred CCCEEEEeCCcHHHHHHHHHhhcCCceEeeEEecCCC----CHHH-HhhC-------CcHHHHHHHhhcCCEEEEecHHH
Confidence 67899999888777777777764 6788889997533 2221 1111 01122234677999999999887
Q ss_pred Hhhccccccccccccccccccceeeec--cCCCCCC--cEEEecCCccCCCCCCCchHHHhhccCchhhHHhhcChhhhh
Q 003962 462 IAGSKDTVGQYESHTAFTLPGLYRVVH--GIDVFDP--KFNIVSPGADMSIYFPYTEEKRRLKSFHPEIEELLYSDVENK 537 (783)
Q Consensus 462 ~~~~~~~v~qy~~~~~f~~p~l~~v~~--gi~~~~~--k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~~~~~l~~~~~~~ 537 (783)
+..+...+..... +-.... ++..... ++.+.|-|||.+.+......... ...+ ...+
T Consensus 209 ~~nFl~~~~r~lg--------~~~~~~~~~v~~~Gr~v~v~~~pigId~~~~~~~~~~~~v----~~~~-------~~l~ 269 (474)
T PF00982_consen 209 ARNFLSCCKRLLG--------LEVDSDRGTVEYNGRRVRVGVFPIGIDPDAFAQLARSPEV----QERA-------EELR 269 (474)
T ss_dssp HHHHHHHHHHHS---------EEEEETTE-EEETTEEEEEEE------HHHHHHHHH-S-------HHH-------HHHH
T ss_pred HHHHHHHHHHHcC--------CcccCCCceEEECCEEEEEEEeeccCChHHHHhhccChHH----HHHH-------HHHH
Confidence 7765444322211 111111 1222222 45678999998766422111000 0000 0112
Q ss_pred hhhccccCCCCcEEEEEecccCCCCHHHHHHHHHHhHccCC----CeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHH--
Q 003962 538 EHLCVLKDRNKPILFTMARLDRVKNLTGLVEWYGKNAKLRE----LVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQ-- 611 (783)
Q Consensus 538 ~~~gll~~~~k~iIl~vGRL~~~Kgl~~LieA~~~l~~~~~----~~~LvIVG~g~~~~~~~~ee~~~~~~l~~li~~-- 611 (783)
+.++ .+..+|+.+.|++..||+..=+.||.++.+.+| .+.|+-++..... ...+.....+++.+++.+
T Consensus 270 ~~~~----~~~~ii~gvDrld~~kGi~~kl~Afe~fL~~~P~~~~kv~liQi~~psr~--~~~~y~~~~~~v~~~v~~IN 343 (474)
T PF00982_consen 270 EKFK----GKRKIIVGVDRLDYTKGIPEKLRAFERFLERYPEYRGKVVLIQIAVPSRE--DVPEYQELRREVEELVGRIN 343 (474)
T ss_dssp HHTT----T-SEEEEEE--B-GGG-HHHHHHHHHHHHHH-GGGTTTEEEEEE--B-ST--TSHHHHHHHHHHHHHHHHHH
T ss_pred HhcC----CCcEEEEEeccchhhcCHHHHHHHHHHHHHhCcCccCcEEEEEEeeccCc--cchhHHHHHHHHHHHHHHHH
Confidence 2221 234799999999999999999999999977665 4777777764332 223344455555555554
Q ss_pred --cCCCC--cEEEccCCCCcCChHHHHHHHHccCcEEEeCCCCCCCcHHHHHHHHcCCc----EEEcCccccccccccCc
Q 003962 612 --YKLNG--QFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLP----TFATCKGGPAEIIVNGK 683 (783)
Q Consensus 612 --~~L~~--~V~flG~~~~~~~~~el~~~ia~aadvfV~PS~~E~fGltvlEAMa~GlP----VVat~~GG~~EiI~dg~ 683 (783)
++-.+ -|.++. ..++.++++.+++. +|+++.+|..+|..++..|+.+|..+ +|.|...|.++.+.++
T Consensus 344 ~~~g~~~~~PI~~~~---~~~~~~~~~aly~~-aDv~lvTslrDGmNLva~Eyva~q~~~~GvLiLSefaGaa~~L~~~- 418 (474)
T PF00982_consen 344 GKYGTPDWTPIIYIY---RSLSFEELLALYRA-ADVALVTSLRDGMNLVAKEYVACQDDNPGVLILSEFAGAAEQLSEA- 418 (474)
T ss_dssp HHH-BTTB-SEEEE----S---HHHHHHHHHH--SEEEE--SSBS--HHHHHHHHHS-TS--EEEEETTBGGGGT-TTS-
T ss_pred hhcccCCceeEEEEe---cCCCHHHHHHHHHh-hhhEEecchhhccCCcceEEEEEecCCCCceEeeccCCHHHHcCCc-
Confidence 33322 366665 25788999999995 99999999999999999999999775 7778888888888543
Q ss_pred eEEEECCCCHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Q 003962 684 SGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEEKYTWKIYSQRLLTLT 742 (783)
Q Consensus 684 ~G~li~p~d~e~lAeaI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~~~a~~ll~ly 742 (783)
.++++|.|.+++|++|.++++ .+++.++..-+..++.+ ..+|-...++++++-.
T Consensus 419 -al~VNP~d~~~~A~ai~~AL~---M~~~Er~~r~~~~~~~v-~~~~~~~W~~~~l~~L 472 (474)
T PF00982_consen 419 -ALLVNPWDIEEVADAIHEALT---MPPEERKERHARLREYV-REHDVQWWAESFLRDL 472 (474)
T ss_dssp --EEE-TT-HHHHHHHHHHHHT-----HHHHHHHHHHHHHHH-HHT-HHHHHHHHHHHH
T ss_pred -cEEECCCChHHHHHHHHHHHc---CCHHHHHHHHHHHHHHh-HhCCHHHHHHHHHHHh
Confidence 589999999999999998874 57777777777888887 7889998888887643
No 101
>PF13579 Glyco_trans_4_4: Glycosyl transferase 4-like domain; PDB: 3C4Q_B 3C4V_A 3C48_B 1Z2T_A.
Probab=99.26 E-value=1.5e-11 Score=117.99 Aligned_cols=160 Identities=14% Similarity=0.226 Sum_probs=84.7
Q ss_pred CcchhhHHHHHHHHHHHHHHHHHHCCCceeeceeEEeCCCCCCCCCcccceeeeecCccCeEEEEeccCCCccccccccc
Q 003962 278 GGQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRLLPDAVGTTCGQRLEKVYGTKYSDILRVPFRTEKGVVRKWIS 357 (783)
Q Consensus 278 GG~~vyv~d~araL~~eLa~~L~~~GheV~~~i~VvT~~~~~~~g~~~~~~~e~i~~~~~v~Ilrvp~~~~~~~~~~~is 357 (783)
||.+.|+. +|+++|.++||+|+ |+|...+... ... ...++.+.++|.......
T Consensus 1 GG~~~~~~--------~l~~~L~~~G~~V~----v~~~~~~~~~------~~~---~~~~~~~~~~~~~~~~~~------ 53 (160)
T PF13579_consen 1 GGIERYVR--------ELARALAARGHEVT----VVTPQPDPED------DEE---EEDGVRVHRLPLPRRPWP------ 53 (160)
T ss_dssp SHHHHHHH--------HHHHHHHHTT-EEE----EEEE---GGG-------SE---EETTEEEEEE--S-SSSG------
T ss_pred CCHHHHHH--------HHHHHHHHCCCEEE----EEecCCCCcc------ccc---ccCCceEEeccCCccchh------
Confidence 89999999 77777899999999 9986543321 101 123688888887654211
Q ss_pred cccchhhHHHHHHHHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHhcCCcEEEEecCCCccCCCCCchhhhhccccccc
Q 003962 358 RFEVWPYLETYTEDVAVEIAKELQGKPDLIIGNYSDGNIVASLLAHKLGVTQCTIAHALEKTKYPDSDIYWKNLDDKYHF 437 (783)
Q Consensus 358 r~~i~~~l~~f~~~~~~~l~~~l~~~pDIIh~h~~~~~lva~llar~lgvp~v~t~H~l~~~~~~~s~~~~~~~~~~y~f 437 (783)
...+. +.... ..++.....+||+||+|++..++++.++++..++|+|+++|+..... ...|... .
T Consensus 54 -~~~~~----~~~~~-~~~l~~~~~~~Dvv~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~----~~~~~~~--~--- 118 (160)
T PF13579_consen 54 -LRLLR----FLRRL-RRLLAARRERPDVVHAHSPTAGLVAALARRRRGIPLVVTVHGTLFRR----GSRWKRR--L--- 118 (160)
T ss_dssp -GGHCC----HHHHH-HHHCHHCT---SEEEEEHHHHHHHHHHHHHHHT--EEEE-SS-T----------HHHH--H---
T ss_pred -hhhHH----HHHHH-HHHHhhhccCCeEEEecccchhHHHHHHHHccCCcEEEEECCCchhh----ccchhhH--H---
Confidence 01111 11122 22222235789999999976667777776678999999999843211 0111100 0
Q ss_pred cchhhHhHHhhhcCCEEEcCCHHHHhhccccccccccccccccccceeeeccCCCCCCcEEEecCC
Q 003962 438 SCQFTADLIAMNHTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPG 503 (783)
Q Consensus 438 ~~~~~~e~~a~~~AD~IIt~S~~~~~~~~~~v~qy~~~~~f~~p~l~~v~~gi~~~~~k~~VIpnG 503 (783)
....+...++.||.++++|+..++.+.+ .|++ ++|+.|||||
T Consensus 119 --~~~~~~~~~~~ad~vi~~S~~~~~~l~~--------------------~g~~--~~ri~vipnG 160 (160)
T PF13579_consen 119 --YRWLERRLLRRADRVIVVSEAMRRYLRR--------------------YGVP--PDRIHVIPNG 160 (160)
T ss_dssp --HHHHHHHHHHH-SEEEESSHHHHHHHHH--------------------H-----GGGEEE----
T ss_pred --HHHHHHHHHhcCCEEEECCHHHHHHHHH--------------------hCCC--CCcEEEeCcC
Confidence 1123667899999999999988774333 2444 7899999998
No 102
>PRK10117 trehalose-6-phosphate synthase; Provisional
Probab=99.24 E-value=1.2e-09 Score=124.04 Aligned_cols=314 Identities=14% Similarity=0.082 Sum_probs=208.1
Q ss_pred CceEEEEcCCCchHHHHHHHHh-cCCcEEEEecCCCccCCCCCchhhhhccccccccchhhHhHHhhhcCCEEEcCCHHH
Q 003962 383 KPDLIIGNYSDGNIVASLLAHK-LGVTQCTIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTFQE 461 (783)
Q Consensus 383 ~pDIIh~h~~~~~lva~llar~-lgvp~v~t~H~l~~~~~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~ 461 (783)
.-|+|-.|....-+++..+.++ ...++-+..|... |.+++. ..+- +-..-...|-.+|.|=.-|+..
T Consensus 123 ~~D~VWVHDYhL~llp~~LR~~~~~~~IgFFlHiPF----Ps~eif-r~LP-------~r~eil~glL~aDlIGFqt~~y 190 (474)
T PRK10117 123 DDDIIWIHDYHLLPFASELRKRGVNNRIGFFLHIPF----PTPEIF-NALP-------PHDELLEQLCDYDLLGFQTEND 190 (474)
T ss_pred CCCEEEEeccHhhHHHHHHHHhCCCCcEEEEEeCCC----CChHHH-hhCC-------ChHHHHHHHHhCccceeCCHHH
Confidence 4589999998877777777665 3568888888653 333322 1111 1122234677999999999887
Q ss_pred HhhccccccccccccccccccceeeeccCCCCCCcEEEecCCccCCCCCCCchHHHhhccCchhhHHhhcChhhhhhhhc
Q 003962 462 IAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEEKRRLKSFHPEIEELLYSDVENKEHLC 541 (783)
Q Consensus 462 ~~~~~~~v~qy~~~~~f~~p~l~~v~~gi~~~~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~~~~~l~~~~~~~~~~g 541 (783)
+..+.+.+....... ...+......|- .-++.+.|-|||.+.|......... .. ..+.++.+
T Consensus 191 ~rnFl~~~~~~lg~~--~~~~~~v~~~gr---~v~v~~~PigID~~~~~~~a~~~~~-----~~-------~~~lr~~~- 252 (474)
T PRK10117 191 RLAFLDCLSNLTRVT--TRSGKSHTAWGK---AFRTEVYPIGIEPDEIAKQAAGPLP-----PK-------LAQLKAEL- 252 (474)
T ss_pred HHHHHHHHHHHcCCc--ccCCCeEEECCe---EEEEEEEECeEcHHHHHHHhhchHH-----HH-------HHHHHHHc-
Confidence 765554432211000 000000000010 1246678999998776432111000 00 01122222
Q ss_pred cccCCCCcEEEEEecccCCCCHHHHHHHHHHhHccCCC----eEEEEEeCCCCCCCccHHHHHHHHHHHHHHHHcCC---
Q 003962 542 VLKDRNKPILFTMARLDRVKNLTGLVEWYGKNAKLREL----VNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKL--- 614 (783)
Q Consensus 542 ll~~~~k~iIl~vGRL~~~Kgl~~LieA~~~l~~~~~~----~~LvIVG~g~~~~~~~~ee~~~~~~l~~li~~~~L--- 614 (783)
.++.+|+.+.|+|..||+..=++||+++.+.+|+ +.|+-++... .+...+......++.+++.+.+-
T Consensus 253 ----~~~~lilgVDRLDytKGi~~rl~Afe~fL~~~Pe~~gkvvlvQia~ps--R~~v~~Y~~l~~~v~~~vg~INg~fg 326 (474)
T PRK10117 253 ----KNVQNIFSVERLDYSKGLPERFLAYEALLEKYPQHHGKIRYTQIAPTS--RGDVQAYQDIRHQLETEAGRINGKYG 326 (474)
T ss_pred ----CCCeEEEEecccccccCHHHHHHHHHHHHHhChhhcCCEEEEEEcCCC--CCccHHHHHHHHHHHHHHHHHHhccC
Confidence 3567999999999999999999999999877764 6677776432 23334445556666666665432
Q ss_pred -CC--cEEEccCCCCcCChHHHHHHHHccCcEEEeCCCCCCCcHHHHHHHHcCC-----cEEEcCccccccccccCceEE
Q 003962 615 -NG--QFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGL-----PTFATCKGGPAEIIVNGKSGY 686 (783)
Q Consensus 615 -~~--~V~flG~~~~~~~~~el~~~ia~aadvfV~PS~~E~fGltvlEAMa~Gl-----PVVat~~GG~~EiI~dg~~G~ 686 (783)
.+ -|+++. ..++.+++..+|+. ||+++.+++-+|..|+..|+.+|-. ..|-|...|.++.+. ..+
T Consensus 327 ~~~w~Pv~y~~---~~~~~~~l~alyr~-ADv~lVTplRDGMNLVAkEyva~q~~~~~GvLILSefAGaA~~L~---~Al 399 (474)
T PRK10117 327 QLGWTPLYYLN---QHFDRKLLMKIFRY-SDVGLVTPLRDGMNLVAKEYVAAQDPANPGVLVLSQFAGAANELT---SAL 399 (474)
T ss_pred CCCceeEEEec---CCCCHHHHHHHHHh-ccEEEecccccccccccchheeeecCCCCccEEEecccchHHHhC---CCe
Confidence 12 245544 36788999999994 9999999999999999999999975 377899988888873 388
Q ss_pred EECCCCHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Q 003962 687 HIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEEKYTWKIYSQRLLTLTG 743 (783)
Q Consensus 687 li~p~d~e~lAeaI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~~~a~~ll~ly~ 743 (783)
+++|.|.+++|++|.++++ .+++.+++--+..++.+ ..+|....++.+++-..
T Consensus 400 lVNP~d~~~~A~Ai~~AL~---Mp~~Er~~R~~~l~~~v-~~~dv~~W~~~fL~~L~ 452 (474)
T PRK10117 400 IVNPYDRDEVAAALDRALT---MPLAERISRHAEMLDVI-VKNDINHWQECFISDLK 452 (474)
T ss_pred EECCCCHHHHHHHHHHHHc---CCHHHHHHHHHHHHHHh-hhCCHHHHHHHHHHHHH
Confidence 9999999999999998874 57777777777777777 78899999998887543
No 103
>PF13439 Glyco_transf_4: Glycosyltransferase Family 4; PDB: 2JJM_E 3MBO_C 2GEJ_A 2GEK_A.
Probab=99.23 E-value=6.4e-11 Score=115.60 Aligned_cols=168 Identities=17% Similarity=0.255 Sum_probs=83.3
Q ss_pred CCCCcchhhHHHHHHHHHHHHHHHHHHCCCceeeceeEEeCCCCCCCCCcccceeeeecCccCeEEEEeccCCCcccccc
Q 003962 275 PDTGGQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRLLPDAVGTTCGQRLEKVYGTKYSDILRVPFRTEKGVVRK 354 (783)
Q Consensus 275 p~tGG~~vyv~d~araL~~eLa~~L~~~GheV~~~i~VvT~~~~~~~g~~~~~~~e~i~~~~~v~Ilrvp~~~~~~~~~~ 354 (783)
+..||.+.++. +|+++|+++||+|+ |+|....+..... ........+....
T Consensus 9 ~~~GG~e~~~~--------~l~~~l~~~G~~v~----v~~~~~~~~~~~~-----------~~~~~~~~~~~~~------ 59 (177)
T PF13439_consen 9 PNIGGAERVVL--------NLARALAKRGHEVT----VVSPGVKDPIEEE-----------LVKIFVKIPYPIR------ 59 (177)
T ss_dssp TSSSHHHHHHH--------HHHHHHHHTT-EEE----EEESS-TTS-SST-----------EEEE---TT-SST------
T ss_pred CCCChHHHHHH--------HHHHHHHHCCCEEE----EEEcCCCccchhh-----------ccceeeeeecccc------
Confidence 45799999999 67777899999999 9887654432111 0011111111110
Q ss_pred ccccccchhhHHHHHHHHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHhcCCcEEEEecCCCccCCCCCchhhhhcccc
Q 003962 355 WISRFEVWPYLETYTEDVAVEIAKELQGKPDLIIGNYSDGNIVASLLAHKLGVTQCTIAHALEKTKYPDSDIYWKNLDDK 434 (783)
Q Consensus 355 ~isr~~i~~~l~~f~~~~~~~l~~~l~~~pDIIh~h~~~~~lva~llar~lgvp~v~t~H~l~~~~~~~s~~~~~~~~~~ 434 (783)
....+.......+.+.+.+. +|||||+|.+.....+..... ++|.|.+.|+..... ..+......
T Consensus 60 -----~~~~~~~~~~~~~~~~i~~~---~~DiVh~~~~~~~~~~~~~~~--~~~~v~~~H~~~~~~-----~~~~~~~~~ 124 (177)
T PF13439_consen 60 -----KRFLRSFFFMRRLRRLIKKE---KPDIVHIHGPPAFWIALLACR--KVPIVYTIHGPYFER-----RFLKSKLSP 124 (177)
T ss_dssp -----SS--HHHHHHHHHHHHHHHH---T-SEEECCTTHCCCHHHHHHH--CSCEEEEE-HHH--H-----HTTTTSCCC
T ss_pred -----cccchhHHHHHHHHHHHHHc---CCCeEEecccchhHHHHHhcc--CCCEEEEeCCCcccc-----cccccccch
Confidence 00111111222223333332 799999998765444444444 999999999854210 000000000
Q ss_pred ccccchhhHhHHhhhcCCEEEcCCHHHHhhccccccccccccccccccceeeeccCCCCCCcEEEecCCccCCCC
Q 003962 435 YHFSCQFTADLIAMNHTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIY 509 (783)
Q Consensus 435 y~f~~~~~~e~~a~~~AD~IIt~S~~~~~~~~~~v~qy~~~~~f~~p~l~~v~~gi~~~~~k~~VIpnGvD~~~f 509 (783)
+... .........+.+|.+|++|...++.+.+ . |++ +.|+.|||||+|++.|
T Consensus 125 ~~~~-~~~~~~~~~~~~~~ii~vS~~~~~~l~~-~-------------------~~~--~~ki~vI~ngid~~~F 176 (177)
T PF13439_consen 125 YSYL-NFRIERKLYKKADRIIAVSESTKDELIK-F-------------------GIP--PEKIHVIYNGIDTDRF 176 (177)
T ss_dssp HHHH-HHCTTHHHHCCSSEEEESSHHHHHHHHH-H-------------------T----SS-EEE----B-CCCH
T ss_pred hhhh-hhhhhhhHHhcCCEEEEECHHHHHHHHH-h-------------------CCc--ccCCEEEECCccHHHc
Confidence 0000 0011223478999999999988774443 2 344 7899999999999877
No 104
>PRK12446 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; Reviewed
Probab=99.23 E-value=7.8e-09 Score=114.83 Aligned_cols=327 Identities=13% Similarity=0.052 Sum_probs=171.4
Q ss_pred CCCcchhhHHHHHHHHHHHHHHHHHHCCCceeeceeEEeCCCCCCCCCcccceeeeecCccCeEEEEeccCCCccccccc
Q 003962 276 DTGGQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRLLPDAVGTTCGQRLEKVYGTKYSDILRVPFRTEKGVVRKW 355 (783)
Q Consensus 276 ~tGG~~vyv~d~araL~~eLa~~L~~~GheV~~~i~VvT~~~~~~~g~~~~~~~e~i~~~~~v~Ilrvp~~~~~~~~~~~ 355 (783)
.|||...-.+ .+++.|+++||+|. ++++...... +-++ ..+..+..++..+..+ .
T Consensus 10 GTGGHi~Pal--------a~a~~l~~~g~~v~----~vg~~~~~e~--------~l~~-~~g~~~~~~~~~~l~~---~- 64 (352)
T PRK12446 10 GSAGHVTPNL--------AIIPYLKEDNWDIS----YIGSHQGIEK--------TIIE-KENIPYYSISSGKLRR---Y- 64 (352)
T ss_pred CcHHHHHHHH--------HHHHHHHhCCCEEE----EEECCCcccc--------ccCc-ccCCcEEEEeccCcCC---C-
Confidence 3677766666 67777888999999 8876532211 0011 1133444444322110 0
Q ss_pred cccccchhhHHHHHHHHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHhcCCcEEEEecCCCccCCCCCchhhhhccccc
Q 003962 356 ISRFEVWPYLETYTEDVAVEIAKELQGKPDLIIGNYSDGNIVASLLAHKLGVTQCTIAHALEKTKYPDSDIYWKNLDDKY 435 (783)
Q Consensus 356 isr~~i~~~l~~f~~~~~~~l~~~l~~~pDIIh~h~~~~~lva~llar~lgvp~v~t~H~l~~~~~~~s~~~~~~~~~~y 435 (783)
.+ ...+.....+.....+.+.-..+.+||+||++....+..+.++++.+++|.++.-.+...
T Consensus 65 ~~-~~~~~~~~~~~~~~~~~~~i~~~~kPdvvi~~Ggy~s~p~~~aa~~~~~p~~i~e~n~~~----------------- 126 (352)
T PRK12446 65 FD-LKNIKDPFLVMKGVMDAYVRIRKLKPDVIFSKGGFVSVPVVIGGWLNRVPVLLHESDMTP----------------- 126 (352)
T ss_pred ch-HHHHHHHHHHHHHHHHHHHHHHhcCCCEEEecCchhhHHHHHHHHHcCCCEEEECCCCCc-----------------
Confidence 00 001111111222222211111235899999987666667789999999998653332111
Q ss_pred cccchhhHhHHhhhcCCEEEcCCHHHHhhccccccccccccccccccceeeeccCCCCCCcEEEecCCccCCCCCCCchH
Q 003962 436 HFSCQFTADLIAMNHTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEE 515 (783)
Q Consensus 436 ~f~~~~~~e~~a~~~AD~IIt~S~~~~~~~~~~v~qy~~~~~f~~p~l~~v~~gi~~~~~k~~VIpnGvD~~~f~p~~~~ 515 (783)
-...++..+.+|.|.++-+.... +++ .+|+.++.|.+..+...+...
T Consensus 127 -----g~~nr~~~~~a~~v~~~f~~~~~-------------------------~~~--~~k~~~tG~Pvr~~~~~~~~~- 173 (352)
T PRK12446 127 -----GLANKIALRFASKIFVTFEEAAK-------------------------HLP--KEKVIYTGSPVREEVLKGNRE- 173 (352)
T ss_pred -----cHHHHHHHHhhCEEEEEccchhh-------------------------hCC--CCCeEEECCcCCcccccccch-
Confidence 01233567788888765432221 122 457778878776644322111
Q ss_pred HHhhccCchhhHHhhcChhhhhhhhccccCCCCcEEEEEecccCCCCHHHH-HHHHHHhHccCCCeEEEEEeCCCCCCCc
Q 003962 516 KRRLKSFHPEIEELLYSDVENKEHLCVLKDRNKPILFTMARLDRVKNLTGL-VEWYGKNAKLRELVNLVVVGGDRRKESK 594 (783)
Q Consensus 516 ~~r~~~~~~~~~~~l~~~~~~~~~~gll~~~~k~iIl~vGRL~~~Kgl~~L-ieA~~~l~~~~~~~~LvIVG~g~~~~~~ 594 (783)
..++.+|+ ++++++|+.+|-=--.+.+..+ .+++..+. .+++++++.+..+
T Consensus 174 -------------------~~~~~~~l--~~~~~~iLv~GGS~Ga~~in~~~~~~l~~l~---~~~~vv~~~G~~~---- 225 (352)
T PRK12446 174 -------------------KGLAFLGF--SRKKPVITIMGGSLGAKKINETVREALPELL---LKYQIVHLCGKGN---- 225 (352)
T ss_pred -------------------HHHHhcCC--CCCCcEEEEECCccchHHHHHHHHHHHHhhc---cCcEEEEEeCCch----
Confidence 11234565 5667777666543223445333 33444442 2467666654421
Q ss_pred cHHHHHHHHHHHHHHHHcCCCCcEEEccCCCCcCChHHHHHHHHccCcEEEeCCCCCCCcHHHHHHHHcCCcEEEcCcc-
Q 003962 595 DLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKG- 673 (783)
Q Consensus 595 ~~ee~~~~~~l~~li~~~~L~~~V~flG~~~~~~~~~el~~~ia~aadvfV~PS~~E~fGltvlEAMa~GlPVVat~~G- 673 (783)
+.+....+ .++...++. .+++..+|+. +|++|.= +-+.|+.|++++|+|.|.....
T Consensus 226 ----------~~~~~~~~---~~~~~~~f~-----~~~m~~~~~~-adlvIsr----~G~~t~~E~~~~g~P~I~iP~~~ 282 (352)
T PRK12446 226 ----------LDDSLQNK---EGYRQFEYV-----HGELPDILAI-TDFVISR----AGSNAIFEFLTLQKPMLLIPLSK 282 (352)
T ss_pred ----------HHHHHhhc---CCcEEecch-----hhhHHHHHHh-CCEEEEC----CChhHHHHHHHcCCCEEEEcCCC
Confidence 11111111 133344522 2457778884 9998874 3478999999999999987442
Q ss_pred ----c----cccccccCceEEEECCC--CHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHH
Q 003962 674 ----G----PAEIIVNGKSGYHIDPY--HGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEEKYTWKIYSQRLLTL 741 (783)
Q Consensus 674 ----G----~~EiI~dg~~G~li~p~--d~e~lAeaI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~~~a~~ll~l 741 (783)
+ .++.+.+-..|..+... +++.+++++.+++ .|++.+++ ++ +.+.....++++.++
T Consensus 283 ~~~~~~Q~~Na~~l~~~g~~~~l~~~~~~~~~l~~~l~~ll----~~~~~~~~---~~-----~~~~~~~aa~~i~~~ 348 (352)
T PRK12446 283 FASRGDQILNAESFERQGYASVLYEEDVTVNSLIKHVEELS----HNNEKYKT---AL-----KKYNGKEAIQTIIDH 348 (352)
T ss_pred CCCCchHHHHHHHHHHCCCEEEcchhcCCHHHHHHHHHHHH----cCHHHHHH---HH-----HHcCCCCHHHHHHHH
Confidence 1 12234444456665432 5677888886554 78765432 11 334555555555443
No 105
>COG0707 MurG UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase [Cell envelope biogenesis, outer membrane]
Probab=99.21 E-value=2.8e-08 Score=110.09 Aligned_cols=313 Identities=14% Similarity=0.119 Sum_probs=179.5
Q ss_pred CCCcchhhHHHHHHHHHHHHHHHHHHCCCc-eeeceeEEeCCCCCCCCCcccceeeeecCccCeEEEEeccCCCcccccc
Q 003962 276 DTGGQVVYILDQVRALEDEMLLRIKQQGLD-ITPQILIITRLLPDAVGTTCGQRLEKVYGTKYSDILRVPFRTEKGVVRK 354 (783)
Q Consensus 276 ~tGG~~vyv~d~araL~~eLa~~L~~~Ghe-V~~~i~VvT~~~~~~~g~~~~~~~e~i~~~~~v~Ilrvp~~~~~~~~~~ 354 (783)
.|||...-.+ .+++.|.++|++ |. ++..... ..+.+....+..+..++......
T Consensus 9 GTGGHv~pAl--------Al~~~l~~~g~~~v~----~~~~~~~---------~e~~l~~~~~~~~~~I~~~~~~~---- 63 (357)
T COG0707 9 GTGGHVFPAL--------ALAEELAKRGWEQVI----VLGTGDG---------LEAFLVKQYGIEFELIPSGGLRR---- 63 (357)
T ss_pred CCccchhHHH--------HHHHHHHhhCccEEE----Eeccccc---------ceeeeccccCceEEEEecccccc----
Confidence 3677766666 678889999996 44 4422211 11111222256666666654211
Q ss_pred ccccccchhhHH-----HHHHHHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHhcCCcEEEEecCCCccCCCCCchhhh
Q 003962 355 WISRFEVWPYLE-----TYTEDVAVEIAKELQGKPDLIIGNYSDGNIVASLLAHKLGVTQCTIAHALEKTKYPDSDIYWK 429 (783)
Q Consensus 355 ~isr~~i~~~l~-----~f~~~~~~~l~~~l~~~pDIIh~h~~~~~lva~llar~lgvp~v~t~H~l~~~~~~~s~~~~~ 429 (783)
...+..+. -......+.+++. .+||+|++........+.+++..+|+|+++.-.+... ...|+
T Consensus 64 ----~~~~~~~~~~~~~~~~~~~a~~il~~--~kPd~vig~Ggyvs~P~~~Aa~~~~iPv~ihEqn~~~------G~ank 131 (357)
T COG0707 64 ----KGSLKLLKAPFKLLKGVLQARKILKK--LKPDVVIGTGGYVSGPVGIAAKLLGIPVIIHEQNAVP------GLANK 131 (357)
T ss_pred ----cCcHHHHHHHHHHHHHHHHHHHHHHH--cCCCEEEecCCccccHHHHHHHhCCCCEEEEecCCCc------chhHH
Confidence 11121111 1111222334443 4799999987777778888899999999876665422 12232
Q ss_pred hccccccccchhhHhHHhhhcCCEEEcCCHHHHhhccccccccccccccccccceeeeccCCCCCCcEEEecCCccCCCC
Q 003962 430 NLDDKYHFSCQFTADLIAMNHTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIY 509 (783)
Q Consensus 430 ~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~~~~~~~~v~qy~~~~~f~~p~l~~v~~gi~~~~~k~~VIpnGvD~~~f 509 (783)
+..+.|+.|.+.-.... .+++ +.++.++.|.+..+..
T Consensus 132 ----------------~~~~~a~~V~~~f~~~~-------------------------~~~~--~~~~~~tG~Pvr~~~~ 168 (357)
T COG0707 132 ----------------ILSKFAKKVASAFPKLE-------------------------AGVK--PENVVVTGIPVRPEFE 168 (357)
T ss_pred ----------------HhHHhhceeeecccccc-------------------------ccCC--CCceEEecCcccHHhh
Confidence 23445666544332110 1122 5578888888876655
Q ss_pred CCCchHHHhhccCchhhHHhhcChhhhhhhhccccCCCCcEEEEEec-ccCCCCHHHHHH-HHHHhHccCCCeEEEEEeC
Q 003962 510 FPYTEEKRRLKSFHPEIEELLYSDVENKEHLCVLKDRNKPILFTMAR-LDRVKNLTGLVE-WYGKNAKLRELVNLVVVGG 587 (783)
Q Consensus 510 ~p~~~~~~r~~~~~~~~~~~l~~~~~~~~~~gll~~~~k~iIl~vGR-L~~~Kgl~~Lie-A~~~l~~~~~~~~LvIVG~ 587 (783)
. ......+. .+ ..++++|+.+|- ..-.+ +..++. +...+.+ +++++...+
T Consensus 169 ~-~~~~~~~~--------------------~~---~~~~~~ilV~GGS~Ga~~-ln~~v~~~~~~l~~---~~~v~~~~G 220 (357)
T COG0707 169 E-LPAAEVRK--------------------DG---RLDKKTILVTGGSQGAKA-LNDLVPEALAKLAN---RIQVIHQTG 220 (357)
T ss_pred c-cchhhhhh--------------------hc---cCCCcEEEEECCcchhHH-HHHHHHHHHHHhhh---CeEEEEEcC
Confidence 4 22211111 11 125677777665 33322 333333 3333322 566666665
Q ss_pred CCCCCCccHHHHHHHHHHHHHHHHcCCCCcEEEccCCCCcCChHHHHHHHHccCcEEEeCCCCCCCcHHHHHHHHcCCcE
Q 003962 588 DRRKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPT 667 (783)
Q Consensus 588 g~~~~~~~~ee~~~~~~l~~li~~~~L~~~V~flG~~~~~~~~~el~~~ia~aadvfV~PS~~E~fGltvlEAMa~GlPV 667 (783)
... .++++..-.+++. ++..++.. ++..+|+. +|+.|.= +=++|+-|..++|+|+
T Consensus 221 ~~~-----------~~~~~~~~~~~~~---~~v~~f~~------dm~~~~~~-ADLvIsR----aGa~Ti~E~~a~g~P~ 275 (357)
T COG0707 221 KND-----------LEELKSAYNELGV---VRVLPFID------DMAALLAA-ADLVISR----AGALTIAELLALGVPA 275 (357)
T ss_pred cch-----------HHHHHHHHhhcCc---EEEeeHHh------hHHHHHHh-ccEEEeC----CcccHHHHHHHhCCCE
Confidence 421 2344444444443 77777433 47888885 9999974 3478999999999999
Q ss_pred EEcCcccc--------ccccccCceEEEECCCC--HHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHH
Q 003962 668 FATCKGGP--------AEIIVNGKSGYHIDPYH--GEQAAEILVDFFEKCKADPSYWDKISLGGLKRI 725 (783)
Q Consensus 668 Vat~~GG~--------~EiI~dg~~G~li~p~d--~e~lAeaI~~~l~~l~~dp~~~~~ms~~a~~~v 725 (783)
|--..+.. +..+++-..|..++-.+ ++.+++.|.+++ .+|+..++|++++++..
T Consensus 276 IliP~p~~~~~~Q~~NA~~l~~~gaa~~i~~~~lt~~~l~~~i~~l~----~~~~~l~~m~~~a~~~~ 339 (357)
T COG0707 276 ILVPYPPGADGHQEYNAKFLEKAGAALVIRQSELTPEKLAELILRLL----SNPEKLKAMAENAKKLG 339 (357)
T ss_pred EEeCCCCCccchHHHHHHHHHhCCCEEEeccccCCHHHHHHHHHHHh----cCHHHHHHHHHHHHhcC
Confidence 98754433 23344445677776444 778888886665 89999999999998765
No 106
>PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming]
Probab=99.21 E-value=2e-09 Score=130.88 Aligned_cols=312 Identities=14% Similarity=0.121 Sum_probs=205.7
Q ss_pred eEEEEcCCCchHHHHHHHHhc-CCcEEEEecCCCccCCCCCchhhhhccccccccchhhHhHHhhhcCCEEEcCCHHHHh
Q 003962 385 DLIIGNYSDGNIVASLLAHKL-GVTQCTIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTFQEIA 463 (783)
Q Consensus 385 DIIh~h~~~~~lva~llar~l-gvp~v~t~H~l~~~~~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~~~ 463 (783)
|+|..|....-+++.++.++. ..++.+..|..+ |.++++. .+ -+...-+..|-.||.|=..|+..+.
T Consensus 203 d~VWVhDYhL~llP~~LR~~~~~~~IgfFlHiPF----Ps~eifr-~L-------P~r~eiL~glL~aDlIGFht~~yar 270 (854)
T PLN02205 203 DFVWIHDYHLMVLPTFLRKRFNRVKLGFFLHSPF----PSSEIYK-TL-------PIREELLRALLNSDLIGFHTFDYAR 270 (854)
T ss_pred CEEEEeCchhhHHHHHHHhhCCCCcEEEEecCCC----CChHHHh-hC-------CcHHHHHHHHhcCCeEEecCHHHHH
Confidence 899999988877777776654 578888999753 3333221 11 1112234577899999999988777
Q ss_pred hccccccccccccccccccceeeeccCCCCCC--cEEEecCCccCCCCCCCch---HHHhhccCchhhHHhhcChhhhhh
Q 003962 464 GSKDTVGQYESHTAFTLPGLYRVVHGIDVFDP--KFNIVSPGADMSIYFPYTE---EKRRLKSFHPEIEELLYSDVENKE 538 (783)
Q Consensus 464 ~~~~~v~qy~~~~~f~~p~l~~v~~gi~~~~~--k~~VIpnGvD~~~f~p~~~---~~~r~~~~~~~~~~~l~~~~~~~~ 538 (783)
.+...+........ ... +...++.+... ++.+.|-|||.+.|..... ...+. .+.++
T Consensus 271 ~Fl~~~~r~lgl~~-~~~---~g~~~~~~~Gr~v~v~~~PigId~~~~~~~~~~~~~~~~~--------------~~l~~ 332 (854)
T PLN02205 271 HFLSCCSRMLGLSY-ESK---RGYIGLEYYGRTVSIKILPVGIHMGQLQSVLSLPETEAKV--------------KELIK 332 (854)
T ss_pred HHHHHHHHHhCCcc-cCC---CcceeEEECCcEEEEEEEeCeEcHHHHHHHhcChhHHHHH--------------HHHHH
Confidence 65554322110000 000 00012222222 4667899999876643211 11111 11222
Q ss_pred hhccccCCCCcEEEEEecccCCCCHHHHHHHHHHhHccCCCe----EEEEEeCCCCCCCccHHHHHHHHHHHHHHHHc--
Q 003962 539 HLCVLKDRNKPILFTMARLDRVKNLTGLVEWYGKNAKLRELV----NLVVVGGDRRKESKDLEEQAEMKKMYSLIDQY-- 612 (783)
Q Consensus 539 ~~gll~~~~k~iIl~vGRL~~~Kgl~~LieA~~~l~~~~~~~----~LvIVG~g~~~~~~~~ee~~~~~~l~~li~~~-- 612 (783)
+++ .+++.+|+.+.|++..||+..=+.||+++.+.+|++ .|+-+.-... +...+..+...++.+++.+.
T Consensus 333 ~~~---~~~~~~ilgVDrlD~~KGi~~kl~A~e~~L~~~P~~~gkvvlvQia~psr--~~~~~y~~~~~ev~~~v~rIN~ 407 (854)
T PLN02205 333 QFC---DQDRIMLLGVDDMDIFKGISLKLLAMEQLLMQHPEWQGKVVLVQIANPAR--GKGKDVKEVQAETHSTVKRINE 407 (854)
T ss_pred Hhc---cCCCEEEEEccCcccccCHHHHHHHHHHHHHhCccccCCEEEEEEecCCC--cccHHHHHHHHHHHHHHHHHHh
Confidence 332 246789999999999999999999999998887764 6766665433 22233444555555555543
Q ss_pred --CCCC--cEEEccCCCCcCChHHHHHHHHccCcEEEeCCCCCCCcHHHHHHHHcCC-------------------cEEE
Q 003962 613 --KLNG--QFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGL-------------------PTFA 669 (783)
Q Consensus 613 --~L~~--~V~flG~~~~~~~~~el~~~ia~aadvfV~PS~~E~fGltvlEAMa~Gl-------------------PVVa 669 (783)
+-.+ .|+++- ..++.+|+..+|+ .||+++.++..+|..|+..|+.+|.. .+|.
T Consensus 408 ~fg~~~~~Pv~~~~---~~~~~~e~~aly~-~ADv~lVT~lRDGMNLva~Eyia~~~~~~~~~~~~~~~~~~~~~gvLiL 483 (854)
T PLN02205 408 TFGKPGYDPIVLID---APLKFYERVAYYV-VAECCLVTAVRDGMNLIPYEYIISRQGNEKLDKLLGLEPSTPKKSMLVV 483 (854)
T ss_pred hcCCCCCceEEEEe---cCCCHHHHHHHHH-hccEEEeccccccccccchheeEEccCccccccccccccccCCCCceEe
Confidence 2222 366664 2678899999999 49999999999999999999999864 3677
Q ss_pred cCccccccccccCceEEEECCCCHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Q 003962 670 TCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEEKYTWKIYSQRLLTLT 742 (783)
Q Consensus 670 t~~GG~~EiI~dg~~G~li~p~d~e~lAeaI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~~~a~~ll~ly 742 (783)
|...|++..+. ..++++|.|.+++|++|.+++. .+++.++.--+..++++ ..+|-...++.++.-.
T Consensus 484 SEfaGaa~~L~---~Ai~VNP~d~~~~a~ai~~AL~---m~~~Er~~R~~~~~~~v-~~~d~~~W~~~fl~~l 549 (854)
T PLN02205 484 SEFIGCSPSLS---GAIRVNPWNIDAVADAMDSALE---MAEPEKQLRHEKHYRYV-STHDVGYWARSFLQDL 549 (854)
T ss_pred eeccchhHHhC---cCeEECCCCHHHHHHHHHHHHc---CCHHHHHHHHHHHHHHH-hhCCHHHHHHHHHHHH
Confidence 88888877662 3789999999999999998874 45666666566677777 7788888888877543
No 107
>TIGR02919 accessory Sec system glycosyltransferase GtfB. Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus.
Probab=99.15 E-value=6.5e-09 Score=118.08 Aligned_cols=143 Identities=11% Similarity=0.095 Sum_probs=110.2
Q ss_pred CcEEEEEecccCCCCHHHHHHHHHHhHccCCCeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHHcCCCCcEEEccCCCCc
Q 003962 548 KPILFTMARLDRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNR 627 (783)
Q Consensus 548 k~iIl~vGRL~~~Kgl~~LieA~~~l~~~~~~~~LvIVG~g~~~~~~~~ee~~~~~~l~~li~~~~L~~~V~flG~~~~~ 627 (783)
+.-+++++. +..+++++++.+..|++.|.| |.+.. ...++.++ +++ ++-+.+.|...
T Consensus 282 ~~~~l~~t~-------s~~I~~i~~Lv~~lPd~~f~I-ga~te----------~s~kL~~L-~~y--~nvvly~~~~~-- 338 (438)
T TIGR02919 282 RKQALILTN-------SDQIEHLEEIVQALPDYHFHI-AALTE----------MSSKLMSL-DKY--DNVKLYPNITT-- 338 (438)
T ss_pred cccEEEECC-------HHHHHHHHHHHHhCCCcEEEE-EecCc----------ccHHHHHH-Hhc--CCcEEECCcCh--
Confidence 334666662 999999999999999999999 66643 12677777 666 45666666333
Q ss_pred CChHHHHHHHHccCcEEEeCCCCCCCcHHHHHHHHcCCcEEEcC-ccccccccccCceEEEECCCCHHHHHHHHHHHHHH
Q 003962 628 VRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATC-KGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEK 706 (783)
Q Consensus 628 ~~~~el~~~ia~aadvfV~PS~~E~fGltvlEAMa~GlPVVat~-~GG~~EiI~dg~~G~li~p~d~e~lAeaI~~~l~~ 706 (783)
..+-.++. .||+++-.|..|+|++++.||++.|+|+++.+ .-|+.++|.+ |.+++.+|+++++++|.+++
T Consensus 339 ---~~l~~ly~-~~dlyLdin~~e~~~~al~eA~~~G~pI~afd~t~~~~~~i~~---g~l~~~~~~~~m~~~i~~lL-- 409 (438)
T TIGR02919 339 ---QKIQELYQ-TCDIYLDINHGNEILNAVRRAFEYNLLILGFEETAHNRDFIAS---ENIFEHNEVDQLISKLKDLL-- 409 (438)
T ss_pred ---HHHHHHHH-hccEEEEccccccHHHHHHHHHHcCCcEEEEecccCCcccccC---CceecCCCHHHHHHHHHHHh--
Confidence 34555566 49999999999999999999999999999984 4467788866 88999999999999997776
Q ss_pred hhCCHHHHHHHHHHHHHH
Q 003962 707 CKADPSYWDKISLGGLKR 724 (783)
Q Consensus 707 l~~dp~~~~~ms~~a~~~ 724 (783)
.||+.+++.-..-++.
T Consensus 410 --~d~~~~~~~~~~q~~~ 425 (438)
T TIGR02919 410 --NDPNQFRELLEQQREH 425 (438)
T ss_pred --cCHHHHHHHHHHHHHH
Confidence 8998776654444433
No 108
>COG0380 OtsA Trehalose-6-phosphate synthase [Carbohydrate transport and metabolism]
Probab=99.11 E-value=1.6e-08 Score=114.34 Aligned_cols=323 Identities=15% Similarity=0.108 Sum_probs=209.0
Q ss_pred HHHHHHcCCCceEEEEcCCCchHHHHHHHHhc-CCcEEEEecCCCccCCCCCchhhhhccccccccchhhHhHHhhhcCC
Q 003962 374 VEIAKELQGKPDLIIGNYSDGNIVASLLAHKL-GVTQCTIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTD 452 (783)
Q Consensus 374 ~~l~~~l~~~pDIIh~h~~~~~lva~llar~l-gvp~v~t~H~l~~~~~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~AD 452 (783)
.++....+ +=|+|..|...--+++.++..+. ..++.+..|..++. +.+.. -+ .+...-...+-.||
T Consensus 139 d~i~~~~~-~gDiIWVhDYhL~L~P~mlR~~~~~~~IgfFlHiPfPs----sEvfr-~l-------P~r~eIl~gll~~d 205 (486)
T COG0380 139 DKIVEIYE-PGDIIWVHDYHLLLVPQMLRERIPDAKIGFFLHIPFPS----SEVFR-CL-------PWREEILEGLLGAD 205 (486)
T ss_pred HHHHHhcC-CCCEEEEEechhhhhHHHHHHhCCCceEEEEEeCCCCC----HHHHh-hC-------chHHHHHHHhhcCC
Confidence 34444433 34999999988877777777664 46778888875432 22211 00 01112234677999
Q ss_pred EEEcCCHHHHhhccccccccccccccccccceeeec-cCCCCCCcEEEecCCccCCCCCCCchHHHhhccCchhhHHhhc
Q 003962 453 FIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVH-GIDVFDPKFNIVSPGADMSIYFPYTEEKRRLKSFHPEIEELLY 531 (783)
Q Consensus 453 ~IIt~S~~~~~~~~~~v~qy~~~~~f~~p~l~~v~~-gi~~~~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~~~~~l~ 531 (783)
.|=..++..+..+.+.+.+.... + +...+.+ +.+....++..+|=|+|...|.......... ..+
T Consensus 206 ligFqt~~y~~nF~~~~~r~~~~---~--~~~~~~~~~~~~~~v~v~a~PIgID~~~~~~~~~~~~v~----~~~----- 271 (486)
T COG0380 206 LIGFQTESYARNFLDLCSRLLGV---T--GDADIRFNGADGRIVKVGAFPIGIDPEEFERALKSPSVQ----EKV----- 271 (486)
T ss_pred eeEecCHHHHHHHHHHHHHhccc---c--ccccccccccCCceEEEEEEeeecCHHHHHHhhcCCchh----hHH-----
Confidence 99999988777655554432110 0 0000111 1110012456678899987664322111000 000
Q ss_pred ChhhhhhhhccccCCCCcEEEEEecccCCCCHHHHHHHHHHhHccCC----CeEEEEEeCCCCCCCccHHHHHHHHHHHH
Q 003962 532 SDVENKEHLCVLKDRNKPILFTMARLDRVKNLTGLVEWYGKNAKLRE----LVNLVVVGGDRRKESKDLEEQAEMKKMYS 607 (783)
Q Consensus 532 ~~~~~~~~~gll~~~~k~iIl~vGRL~~~Kgl~~LieA~~~l~~~~~----~~~LvIVG~g~~~~~~~~ee~~~~~~l~~ 607 (783)
.+.++.+ ..++.+|+.+.|+|..||+..=+.||.++.+.+| .+.|+-++.... ....+......++..
T Consensus 272 --~el~~~~----~~~~kiivgvDRlDy~kGi~~rl~Afe~lL~~~Pe~~~kvvliQi~~pSr--~~v~~y~~~~~~i~~ 343 (486)
T COG0380 272 --LELKAEL----GRNKKLIVGVDRLDYSKGIPQRLLAFERLLEEYPEWRGKVVLLQIAPPSR--EDVEEYQALRLQIEE 343 (486)
T ss_pred --HHHHHHh----cCCceEEEEehhcccccCcHHHHHHHHHHHHhChhhhCceEEEEecCCCc--cccHHHHHHHHHHHH
Confidence 0111222 2347899999999999999999999999987766 466777776543 223333445555555
Q ss_pred HHHHcC-CCCc-----EEEccCCCCcCChHHHHHHHHccCcEEEeCCCCCCCcHHHHHHHHcC----CcEEEcCcccccc
Q 003962 608 LIDQYK-LNGQ-----FRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCG----LPTFATCKGGPAE 677 (783)
Q Consensus 608 li~~~~-L~~~-----V~flG~~~~~~~~~el~~~ia~aadvfV~PS~~E~fGltvlEAMa~G----lPVVat~~GG~~E 677 (783)
++.+.+ ..++ |.|+- ..++..+++.+++. +|+++.+++-+|..++..|+.+|- =|.|-|...|.+.
T Consensus 344 ~V~rIN~~fG~~~~~Pv~~l~---~~~~~~~l~al~~~-aDv~lVtplrDGMNLvakEyVa~q~~~~G~LiLSeFaGaa~ 419 (486)
T COG0380 344 LVGRINGEFGSLSWTPVHYLH---RDLDRNELLALYRA-ADVMLVTPLRDGMNLVAKEYVAAQRDKPGVLILSEFAGAAS 419 (486)
T ss_pred HHHHHHhhcCCCCcceeEEEe---ccCCHHHHHHHHhh-hceeeeccccccccHHHHHHHHhhcCCCCcEEEeccccchh
Confidence 555432 1233 44444 25778999999995 999999999999999999999984 4778888888877
Q ss_pred ccccCceEEEECCCCHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Q 003962 678 IIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEEKYTWKIYSQRLLTLT 742 (783)
Q Consensus 678 iI~dg~~G~li~p~d~e~lAeaI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~~~a~~ll~ly 742 (783)
.+.+ .++++|.|.+++|++|.++++ .+++.+++.-+..++.+ ..+|-...++.+++-.
T Consensus 420 ~L~~---AliVNP~d~~~va~ai~~AL~---m~~eEr~~r~~~~~~~v-~~~d~~~W~~~fl~~l 477 (486)
T COG0380 420 ELRD---ALIVNPWDTKEVADAIKRALT---MSLEERKERHEKLLKQV-LTHDVARWANSFLDDL 477 (486)
T ss_pred hhcc---CEeECCCChHHHHHHHHHHhc---CCHHHHHHHHHHHHHHH-HhhhHHHHHHHHHHHH
Confidence 7744 789999999999999998875 57777777777777777 7788888888876543
No 109
>cd03784 GT1_Gtf_like This family includes the Gtfs, a group of homologous glycosyltransferases involved in the final stages of the biosynthesis of antibiotics vancomycin and related chloroeremomycin. Gtfs transfer sugar moieties from an activated NDP-sugar donor to the oxidatively cross-linked heptapeptide core of vancomycin group antibiotics. The core structure is important for the bioactivity of the antibiotics.
Probab=98.98 E-value=1.2e-07 Score=106.57 Aligned_cols=135 Identities=17% Similarity=0.084 Sum_probs=85.9
Q ss_pred CCCCcEEEEEecccC---CCCHHHHHHHHHHhHccCCCeEEE-EEeCCCCCCCccHHHHHHHHHHHHHHHHcCCCCcEEE
Q 003962 545 DRNKPILFTMARLDR---VKNLTGLVEWYGKNAKLRELVNLV-VVGGDRRKESKDLEEQAEMKKMYSLIDQYKLNGQFRW 620 (783)
Q Consensus 545 ~~~k~iIl~vGRL~~---~Kgl~~LieA~~~l~~~~~~~~Lv-IVG~g~~~~~~~~ee~~~~~~l~~li~~~~L~~~V~f 620 (783)
+.+++++++.|+... .+-...+++++... +.+++ .+|..... . ..+.++|.+
T Consensus 237 ~~~~~v~v~~Gs~~~~~~~~~~~~~~~a~~~~-----~~~~i~~~g~~~~~------------~-------~~~~~~v~~ 292 (401)
T cd03784 237 AGRPPVYVGFGSMVVRDPEALARLDVEAVATL-----GQRAILSLGWGGLG------------A-------EDLPDNVRV 292 (401)
T ss_pred CCCCcEEEeCCCCcccCHHHHHHHHHHHHHHc-----CCeEEEEccCcccc------------c-------cCCCCceEE
Confidence 344567788888754 23444555665543 34444 44544321 0 245678999
Q ss_pred ccCCCCcCChHHHHHHHHccCcEEEeCCCCCCCcHHHHHHHHcCCcEEEcCccc----cccccccCceEEEECCC--CHH
Q 003962 621 ISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGG----PAEIIVNGKSGYHIDPY--HGE 694 (783)
Q Consensus 621 lG~~~~~~~~~el~~~ia~aadvfV~PS~~E~fGltvlEAMa~GlPVVat~~GG----~~EiI~dg~~G~li~p~--d~e 694 (783)
.+ +++..+++. .+|++|.- |-..|+.||+++|+|+|.....+ .++.+.....|..+++. +++
T Consensus 293 ~~----~~p~~~ll~----~~d~~I~h----gG~~t~~eal~~GvP~v~~P~~~dQ~~~a~~~~~~G~g~~l~~~~~~~~ 360 (401)
T cd03784 293 VD----FVPHDWLLP----RCAAVVHH----GGAGTTAAALRAGVPQLVVPFFGDQPFWAARVAELGAGPALDPRELTAE 360 (401)
T ss_pred eC----CCCHHHHhh----hhheeeec----CCchhHHHHHHcCCCEEeeCCCCCcHHHHHHHHHCCCCCCCCcccCCHH
Confidence 98 566666655 59999953 33469999999999999986655 24455555578777665 678
Q ss_pred HHHHHHHHHHHHhhCCHHHHHHHHHH
Q 003962 695 QAAEILVDFFEKCKADPSYWDKISLG 720 (783)
Q Consensus 695 ~lAeaI~~~l~~l~~dp~~~~~ms~~ 720 (783)
++++++.+++ .++ .+++..+.
T Consensus 361 ~l~~al~~~l----~~~-~~~~~~~~ 381 (401)
T cd03784 361 RLAAALRRLL----DPP-SRRRAAAL 381 (401)
T ss_pred HHHHHHHHHh----CHH-HHHHHHHH
Confidence 8888886655 543 44444433
No 110
>PF08323 Glyco_transf_5: Starch synthase catalytic domain; InterPro: IPR013534 This region represents the catalytic domain of glycogen (or starch) synthases that use ADP-glucose (2.4.1.21 from EC), rather than UDP-glucose (2.4.1.11 from EC) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate.; PDB: 2BIS_C 3L01_A 3FRO_A 2R4U_A 2R4T_A 3D1J_A 3COP_A 3GUH_A 2QZS_A 3CX4_A ....
Probab=98.90 E-value=5.4e-09 Score=110.30 Aligned_cols=186 Identities=15% Similarity=0.109 Sum_probs=102.8
Q ss_pred eEEEEcccccccccCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHHCCCceeeceeEEeCCCCCCCCCcc-cceeeeec-
Q 003962 256 NVVILTPHGYFAQDDVLGYPDTGGQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRLLPDAVGTTC-GQRLEKVY- 333 (783)
Q Consensus 256 rI~iis~h~~~~~~~~lg~p~tGG~~vyv~d~araL~~eLa~~L~~~GheV~~~i~VvT~~~~~~~g~~~-~~~~e~i~- 333 (783)
||+++|.-..|- ..+||...++. .|+++|+++||+|. |+++.+........ ........
T Consensus 1 kIl~vt~E~~P~-------~k~GGLgdv~~--------~L~kaL~~~G~~V~----Vi~P~y~~~~~~~~~~~~~~~~~~ 61 (245)
T PF08323_consen 1 KILMVTSEYAPF-------AKVGGLGDVVG--------SLPKALAKQGHDVR----VIMPKYGFIDEEYFQLEPVRRLSV 61 (245)
T ss_dssp EEEEE-S-BTTT-------B-SSHHHHHHH--------HHHHHHHHTT-EEE----EEEE-THHHHHHCTTEEEEEEES-
T ss_pred CEEEEEcccCcc-------cccCcHhHHHH--------HHHHHHHhcCCeEE----EEEccchhhhhhhhcceEEEEecc
Confidence 789999776532 47899999999 66666799999999 99887642111100 00010000
Q ss_pred -------------------CccCeEEEEeccCCCccccccccccccch--------hhHHH--HHHHHHHHHHHHcCCCc
Q 003962 334 -------------------GTKYSDILRVPFRTEKGVVRKWISRFEVW--------PYLET--YTEDVAVEIAKELQGKP 384 (783)
Q Consensus 334 -------------------~~~~v~Ilrvp~~~~~~~~~~~isr~~i~--------~~l~~--f~~~~~~~l~~~l~~~p 384 (783)
..+++.++-+.... +..+..++ .-.++ ++..+..++...++.+|
T Consensus 62 ~~~~~v~~~~~~~~~v~~~~~~~v~v~~i~~~~-------~f~r~~iY~~~~~~~~d~~~rf~~fs~a~le~~~~l~~~p 134 (245)
T PF08323_consen 62 PFGGPVPVGVWYEVRVYRYPVDGVPVYFIDNPE-------YFDRPGIYGDNGGDYPDNAERFAFFSRAALELLKKLGWKP 134 (245)
T ss_dssp STTCEEEEE----EEEEEEEETTEEEEEEESHH-------HHGSSSSSBSTSSBHTTHHHHHHHHHHHHHHHHCTCT-S-
T ss_pred ccccccccccceEEEEEEEEcCCccEEEecChh-------hccccceeccCCCcchhHHHHHHHHHHHHHHHHHhhCCCC
Confidence 01234444332211 11111222 11223 33344445555555689
Q ss_pred eEEEEcCCCchHHHHHHHHhc-------CCcEEEEecCCCccCCCCC-c-----hhhhh--ccccccccchhhHhHHhhh
Q 003962 385 DLIIGNYSDGNIVASLLAHKL-------GVTQCTIAHALEKTKYPDS-D-----IYWKN--LDDKYHFSCQFTADLIAMN 449 (783)
Q Consensus 385 DIIh~h~~~~~lva~llar~l-------gvp~v~t~H~l~~~~~~~s-~-----~~~~~--~~~~y~f~~~~~~e~~a~~ 449 (783)
||||+|.|..++++.+++... ++|+|+|+|++........ . +.+.. ....+.+...+...+.++.
T Consensus 135 DIIH~hDW~tal~p~~lk~~~~~~~~~~~~~~v~TIHN~~yqg~~~~~~~~~~gl~~~~~~~~~~~~~~~~in~lk~gi~ 214 (245)
T PF08323_consen 135 DIIHCHDWHTALAPLYLKERYQQDPFFANIPTVFTIHNLEYQGIFPPEDLKALGLPDEYFQNLDEYEFYGQINFLKAGIV 214 (245)
T ss_dssp SEEEEECGGGTTHHHHHHHCCSS------SEEEEEESSTT---EEEGGGGGCTT-GGGGS-STTTTEETTEEEHHHHHHH
T ss_pred CEEEecCchHHHHHHHhccccccccccccceeEEEEcccccCCcCCHHHHHHcCCCHHHhccccccccccccCHHHHHHH
Confidence 999999999999999998876 5999999999765432211 1 11111 1122233334455668899
Q ss_pred cCCEEEcCCHHHHhhccc
Q 003962 450 HTDFIITSTFQEIAGSKD 467 (783)
Q Consensus 450 ~AD~IIt~S~~~~~~~~~ 467 (783)
.||.|+|+|+..++.+.+
T Consensus 215 ~AD~v~TVS~~Ya~Ei~~ 232 (245)
T PF08323_consen 215 YADKVTTVSPTYAREIQT 232 (245)
T ss_dssp HSSEEEESSHHHHHHTTS
T ss_pred hcCEeeeCCHHHHHHHhC
Confidence 999999999998875443
No 111
>TIGR01426 MGT glycosyltransferase, MGT family. This model describes the MGT (macroside glycosyltransferase) subfamily of the UDP-glucuronosyltransferase family. Members include a number of glucosyl transferases for macrolide antibiotic inactivation, but also include transferases of glucose-related sugars for macrolide antibiotic production.
Probab=98.90 E-value=8.3e-07 Score=99.81 Aligned_cols=111 Identities=21% Similarity=0.252 Sum_probs=74.0
Q ss_pred CCCcEEEccCCCCcCChHHHHHHHHccCcEEEeCCCCCCCcHHHHHHHHcCCcEEEcCcccc----ccccccCceEEEEC
Q 003962 614 LNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGP----AEIIVNGKSGYHID 689 (783)
Q Consensus 614 L~~~V~flG~~~~~~~~~el~~~ia~aadvfV~PS~~E~fGltvlEAMa~GlPVVat~~GG~----~EiI~dg~~G~li~ 689 (783)
+.++|.+.+ +++..++ +. .+|++|..+- . .|+.||+++|+|+|+....+- ...+.+...|..++
T Consensus 273 ~~~~v~~~~----~~p~~~l---l~-~~~~~I~hgG---~-~t~~Eal~~G~P~v~~p~~~dq~~~a~~l~~~g~g~~l~ 340 (392)
T TIGR01426 273 LPPNVEVRQ----WVPQLEI---LK-KADAFITHGG---M-NSTMEALFNGVPMVAVPQGADQPMTARRIAELGLGRHLP 340 (392)
T ss_pred CCCCeEEeC----CCCHHHH---Hh-hCCEEEECCC---c-hHHHHHHHhCCCEEecCCcccHHHHHHHHHHCCCEEEec
Confidence 457899888 5555554 44 5999997542 2 489999999999999754432 33344555777776
Q ss_pred CC--CHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHH
Q 003962 690 PY--HGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEEKYTWKIYSQRLLTL 741 (783)
Q Consensus 690 p~--d~e~lAeaI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~~~a~~ll~l 741 (783)
.. ++++++++|.+++ .|+++++++.+- .+.+...-.-+..++.++++
T Consensus 341 ~~~~~~~~l~~ai~~~l----~~~~~~~~~~~l-~~~~~~~~~~~~aa~~i~~~ 389 (392)
T TIGR01426 341 PEEVTAEKLREAVLAVL----SDPRYAERLRKM-RAEIREAGGARRAADEIEGF 389 (392)
T ss_pred cccCCHHHHHHHHHHHh----cCHHHHHHHHHH-HHHHHHcCCHHHHHHHHHHh
Confidence 43 5788888886665 888877666443 33343445666666666554
No 112
>PF09314 DUF1972: Domain of unknown function (DUF1972); InterPro: IPR015393 This domain is functionally uncharacterised and found in bacterial glycosyltransferases and rhamnosyltransferases.
Probab=98.89 E-value=4.4e-08 Score=98.25 Aligned_cols=182 Identities=19% Similarity=0.176 Sum_probs=117.1
Q ss_pred cceEEEEcccccccccCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHHCCCceeeceeEEeCCCCCCCCCcccceeeeec
Q 003962 254 VFNVVILTPHGYFAQDDVLGYPDTGGQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRLLPDAVGTTCGQRLEKVY 333 (783)
Q Consensus 254 ~~rI~iis~h~~~~~~~~lg~p~tGG~~vyv~d~araL~~eLa~~L~~~GheV~~~i~VvT~~~~~~~g~~~~~~~e~i~ 333 (783)
|.||+|+...|.|. ..||.|+.+. +|+.+|+++||+|+ |.|+...... . ..
T Consensus 1 mkkIaIiGtrGIPa--------~YGGfET~ve--------~L~~~l~~~g~~v~----Vyc~~~~~~~------~---~~ 51 (185)
T PF09314_consen 1 MKKIAIIGTRGIPA--------RYGGFETFVE--------ELAPRLVSKGIDVT----VYCRSDYYPY------K---EF 51 (185)
T ss_pred CceEEEEeCCCCCc--------ccCcHHHHHH--------HHHHHHhcCCceEE----EEEccCCCCC------C---Cc
Confidence 45899999999965 4699999999 88889999999999 9988632211 1 12
Q ss_pred CccCeEEEEeccCCCccccccccccccchhhHHHHHHHHHHHHHHHcCCCceEEEEcCCC-chHHHHHHHHh--cCCcEE
Q 003962 334 GTKYSDILRVPFRTEKGVVRKWISRFEVWPYLETYTEDVAVEIAKELQGKPDLIIGNYSD-GNIVASLLAHK--LGVTQC 410 (783)
Q Consensus 334 ~~~~v~Ilrvp~~~~~~~~~~~isr~~i~~~l~~f~~~~~~~l~~~l~~~pDIIh~h~~~-~~lva~llar~--lgvp~v 410 (783)
...+++++.+|.... |. ...+.|--.-+..++.. .+.-+.+.||||.+... ++.+..++.+. .|.|++
T Consensus 52 ~y~gv~l~~i~~~~~-g~-------~~si~yd~~sl~~al~~-~~~~~~~~~ii~ilg~~~g~~~~~~~r~~~~~g~~v~ 122 (185)
T PF09314_consen 52 EYNGVRLVYIPAPKN-GS-------AESIIYDFLSLLHALRF-IKQDKIKYDIILILGYGIGPFFLPFLRKLRKKGGKVV 122 (185)
T ss_pred ccCCeEEEEeCCCCC-Cc-------hHHHHHHHHHHHHHHHH-HhhccccCCEEEEEcCCccHHHHHHHHhhhhcCCcEE
Confidence 234789999987542 21 11111100001111111 11112357899987766 45555555443 477999
Q ss_pred EEecCCCccCCCCCchhhhhccccccccchhhHhHHhhhcCCEEEcCCHHHHhhccccccccccccccccccceeeeccC
Q 003962 411 TIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGI 490 (783)
Q Consensus 411 ~t~H~l~~~~~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~~~~~~~~v~qy~~~~~f~~p~l~~v~~gi 490 (783)
++.|+++... .+|..+..+|- ...|+++.+.||.+|+-|....+.+++..
T Consensus 123 vN~DGlEWkR-----~KW~~~~k~~l----k~~E~~avk~ad~lIaDs~~I~~y~~~~y--------------------- 172 (185)
T PF09314_consen 123 VNMDGLEWKR-----AKWGRPAKKYL----KFSEKLAVKYADRLIADSKGIQDYIKERY--------------------- 172 (185)
T ss_pred ECCCcchhhh-----hhcCHHHHHHH----HHHHHHHHHhCCEEEEcCHHHHHHHHHHc---------------------
Confidence 9999986532 46666655542 35688899999999999987665433331
Q ss_pred CCCCCcEEEecCCcc
Q 003962 491 DVFDPKFNIVSPGAD 505 (783)
Q Consensus 491 ~~~~~k~~VIpnGvD 505 (783)
+ ..+..+|++|+|
T Consensus 173 ~--~~~s~~IaYGad 185 (185)
T PF09314_consen 173 G--RKKSTFIAYGAD 185 (185)
T ss_pred C--CCCcEEecCCCC
Confidence 1 367889999987
No 113
>TIGR03492 conserved hypothetical protein. This protein family is restricted to the Cyanobacteria, in one or two copies, save for instances in the genus Deinococcus. This protein shows some sequence similarity, especially toward the C-terminus, to lipid-A-disaccharide synthase (TIGR00215 or pfam02684). The function is unknown.
Probab=98.83 E-value=1.3e-06 Score=98.60 Aligned_cols=272 Identities=15% Similarity=0.145 Sum_probs=154.7
Q ss_pred CCCceEEEEcCCCchHHHHHHHHhcCCcEEE-EecCCCccCCCCCchhhhhcccccccc---c--hhhHhHHhhhcCCEE
Q 003962 381 QGKPDLIIGNYSDGNIVASLLAHKLGVTQCT-IAHALEKTKYPDSDIYWKNLDDKYHFS---C--QFTADLIAMNHTDFI 454 (783)
Q Consensus 381 ~~~pDIIh~h~~~~~lva~llar~lgvp~v~-t~H~l~~~~~~~s~~~~~~~~~~y~f~---~--~~~~e~~a~~~AD~I 454 (783)
.++||+|.+- |++++.++|+..|+|+++ -.|.... +..+...| ...+.|+-. . -+..-++.-+.||.|
T Consensus 91 ~~~p~~v~~~---Gg~v~~~aA~~~~~p~~~~~~~esn~--~~~~~~~~-~~~~~~~~~~G~~~~p~e~n~l~~~~a~~v 164 (396)
T TIGR03492 91 AKKGDLIVAV---GDIVPLLFAWLSGKPYAFVGTAKSDY--YWESGPRR-SPSDEYHRLEGSLYLPWERWLMRSRRCLAV 164 (396)
T ss_pred hhcCCEEEEE---CcHHHHHHHHHcCCCceEEEeeccce--eecCCCCC-ccchhhhccCCCccCHHHHHHhhchhhCEE
Confidence 3489999976 456678888889999876 3343111 11111111 111111100 0 001123455788999
Q ss_pred EcCCHHHHhhccccccccccccccccccceeeeccCCCCCCcEEEecCCccCCCCCCCchHHHhhccCchhhHHhhcChh
Q 003962 455 ITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEEKRRLKSFHPEIEELLYSDV 534 (783)
Q Consensus 455 It~S~~~~~~~~~~v~qy~~~~~f~~p~l~~v~~gi~~~~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~~~~~l~~~~ 534 (783)
.+..+...+.+++. ..++.++.|.+=...... ..
T Consensus 165 ~~~~~~t~~~l~~~-------------------------g~k~~~vGnPv~d~l~~~-~~-------------------- 198 (396)
T TIGR03492 165 FVRDRLTARDLRRQ-------------------------GVRASYLGNPMMDGLEPP-ER-------------------- 198 (396)
T ss_pred eCCCHHHHHHHHHC-------------------------CCeEEEeCcCHHhcCccc-cc--------------------
Confidence 88887665522211 236677776543222111 00
Q ss_pred hhhhhhccccCCCCc-EEEEEecc-c-CCCCHHHHHHHHHHhHccCCCeEEEEEe-CCCCCCCccHHHHHHHHHHHHHHH
Q 003962 535 ENKEHLCVLKDRNKP-ILFTMARL-D-RVKNLTGLVEWYGKNAKLRELVNLVVVG-GDRRKESKDLEEQAEMKKMYSLID 610 (783)
Q Consensus 535 ~~~~~~gll~~~~k~-iIl~vGRL-~-~~Kgl~~LieA~~~l~~~~~~~~LvIVG-~g~~~~~~~~ee~~~~~~l~~li~ 610 (783)
.++ +++++ +++.-|+- . ..+++..+++++..+.+. +++++++.- ++.+ .+.+++..+
T Consensus 199 -----~~l--~~~~~~lllLpGSR~ae~~~~lp~~l~al~~L~~~-~~~~~v~~~~~~~~-----------~~~~~~~l~ 259 (396)
T TIGR03492 199 -----KPL--LTGRFRIALLPGSRPPEAYRNLKLLLRALEALPDS-QPFVFLAAIVPSLS-----------LEKLQAILE 259 (396)
T ss_pred -----ccc--CCCCCEEEEECCCCHHHHHccHHHHHHHHHHHhhC-CCeEEEEEeCCCCC-----------HHHHHHHHH
Confidence 022 23334 44555544 2 357888999999999765 778887765 3332 233444444
Q ss_pred HcCCC--------------CcEEEccCCCCcCChHHHHHHHHccCcEEEeCCCCCCCcHHHHHHHHcCCcEEEcCcccc-
Q 003962 611 QYKLN--------------GQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGP- 675 (783)
Q Consensus 611 ~~~L~--------------~~V~flG~~~~~~~~~el~~~ia~aadvfV~PS~~E~fGltvlEAMa~GlPVVat~~GG~- 675 (783)
+.+.. +++.+.. ...+++.+++. ||++|..| |.+..|++++|+|+|.....+.
T Consensus 260 ~~g~~~~~~~~~~~~~~~~~~~~v~~------~~~~~~~~l~~-ADlvI~rS-----Gt~T~E~a~lg~P~Ilip~~~~q 327 (396)
T TIGR03492 260 DLGWQLEGSSEDQTSLFQKGTLEVLL------GRGAFAEILHW-ADLGIAMA-----GTATEQAVGLGKPVIQLPGKGPQ 327 (396)
T ss_pred hcCceecCCccccchhhccCceEEEe------chHhHHHHHHh-CCEEEECc-----CHHHHHHHHhCCCEEEEeCCCCH
Confidence 43432 1244443 12467788884 99999874 4555999999999999874433
Q ss_pred --cccccc-----CceEEEECCCCHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHH
Q 003962 676 --AEIIVN-----GKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEEKYTWKIYSQRLLT 740 (783)
Q Consensus 676 --~EiI~d-----g~~G~li~p~d~e~lAeaI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~~~a~~ll~ 740 (783)
..+.+. | .+..+...+++.+++++.+++ .|++.+++|.+++++........+.+++.+.+
T Consensus 328 ~na~~~~~~~~l~g-~~~~l~~~~~~~l~~~l~~ll----~d~~~~~~~~~~~~~~lg~~~a~~~ia~~i~~ 394 (396)
T TIGR03492 328 FTYGFAEAQSRLLG-GSVFLASKNPEQAAQVVRQLL----ADPELLERCRRNGQERMGPPGASARIAESILK 394 (396)
T ss_pred HHHHHHHhhHhhcC-CEEecCCCCHHHHHHHHHHHH----cCHHHHHHHHHHHHHhcCCCCHHHHHHHHHHH
Confidence 122222 3 344455667888988886655 89999888886565554344555555554443
No 114
>PF13528 Glyco_trans_1_3: Glycosyl transferase family 1
Probab=98.74 E-value=1.1e-06 Score=95.74 Aligned_cols=116 Identities=17% Similarity=0.184 Sum_probs=80.1
Q ss_pred CCCcEEEEEecccCCCCHHHHHHHHHHhHccCCCeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHHcCCCCcEEEccCCC
Q 003962 546 RNKPILFTMARLDRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQM 625 (783)
Q Consensus 546 ~~k~iIl~vGRL~~~Kgl~~LieA~~~l~~~~~~~~LvIVG~g~~~~~~~~ee~~~~~~l~~li~~~~L~~~V~flG~~~ 625 (783)
+.+.+++++|..+.. .++++++.+ ++..++++|....+ ...++|.+.++
T Consensus 191 ~~~~iLv~~gg~~~~----~~~~~l~~~----~~~~~~v~g~~~~~---------------------~~~~ni~~~~~-- 239 (318)
T PF13528_consen 191 DEPKILVYFGGGGPG----DLIEALKAL----PDYQFIVFGPNAAD---------------------PRPGNIHVRPF-- 239 (318)
T ss_pred CCCEEEEEeCCCcHH----HHHHHHHhC----CCCeEEEEcCCccc---------------------ccCCCEEEeec--
Confidence 345688999987765 666776664 57889999766311 01578998863
Q ss_pred CcCChHHHHHHHHccCcEEEeCCCCCCCcH-HHHHHHHcCCcEEEcCcccccc------ccccCceEEEECCC--CHHHH
Q 003962 626 NRVRNGELYRYICDTKGAFVQPALYEAFGL-TVVEAMTCGLPTFATCKGGPAE------IIVNGKSGYHIDPY--HGEQA 696 (783)
Q Consensus 626 ~~~~~~el~~~ia~aadvfV~PS~~E~fGl-tvlEAMa~GlPVVat~~GG~~E------iI~dg~~G~li~p~--d~e~l 696 (783)
...++.++|+. ||++|.-+ |. |+.||+++|+|++.-...+..| .++.-..|..+++. +++.+
T Consensus 240 ---~~~~~~~~m~~-ad~vIs~~-----G~~t~~Ea~~~g~P~l~ip~~~~~EQ~~~a~~l~~~G~~~~~~~~~~~~~~l 310 (318)
T PF13528_consen 240 ---STPDFAELMAA-ADLVISKG-----GYTTISEALALGKPALVIPRPGQDEQEYNARKLEELGLGIVLSQEDLTPERL 310 (318)
T ss_pred ---ChHHHHHHHHh-CCEEEECC-----CHHHHHHHHHcCCCEEEEeCCCCchHHHHHHHHHHCCCeEEcccccCCHHHH
Confidence 33578888985 99999752 44 5999999999999987755433 33444466665533 56777
Q ss_pred HHHHH
Q 003962 697 AEILV 701 (783)
Q Consensus 697 AeaI~ 701 (783)
++.|.
T Consensus 311 ~~~l~ 315 (318)
T PF13528_consen 311 AEFLE 315 (318)
T ss_pred HHHHh
Confidence 77773
No 115
>TIGR03568 NeuC_NnaA UDP-N-acetyl-D-glucosamine 2-epimerase, UDP-hydrolysing. This family of enzymes catalyzes the combined epimerization and UDP-hydrolysis of UDP-N-acetylglucosamine to N-acetylmannosamine. This is in contrast to the related enzyme WecB (TIGR00236) which retains the UDP moiety. NeuC acts in concert with NeuA and NeuB to synthesize CMP-N5-acetyl-neuraminate.
Probab=98.71 E-value=2e-06 Score=96.23 Aligned_cols=266 Identities=17% Similarity=0.212 Sum_probs=150.9
Q ss_pred CCceEEEEcCCC-chHHHHHHHHhcCCcEEEEecCCCccCCCCCchhhhhccccccccchhhHhHHhhhcCCEEEcCCHH
Q 003962 382 GKPDLIIGNYSD-GNIVASLLAHKLGVTQCTIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTFQ 460 (783)
Q Consensus 382 ~~pDIIh~h~~~-~~lva~llar~lgvp~v~t~H~l~~~~~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~ 460 (783)
.+||+|.++... ..+.++++|..+++|++. +|+-..+. + ..+... -...-+-|+..+++++.
T Consensus 92 ~~Pd~vlv~GD~~~~la~alaA~~~~IPv~H-veaG~rs~----~----~~eE~~--------r~~i~~la~l~f~~t~~ 154 (365)
T TIGR03568 92 LKPDLVVVLGDRFEMLAAAIAAALLNIPIAH-IHGGEVTE----G----AIDESI--------RHAITKLSHLHFVATEE 154 (365)
T ss_pred hCCCEEEEeCCchHHHHHHHHHHHhCCcEEE-EECCccCC----C----CchHHH--------HHHHHHHHhhccCCCHH
Confidence 479999998854 467889999999999764 44321111 0 001110 11223456777888877
Q ss_pred HHhhccccccccccccccccccceeeeccCCCCCCcEEEecC-CccCCCCCCCchHHHhhccCchhhHHhhcChhhhhhh
Q 003962 461 EIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSP-GADMSIYFPYTEEKRRLKSFHPEIEELLYSDVENKEH 539 (783)
Q Consensus 461 ~~~~~~~~v~qy~~~~~f~~p~l~~v~~gi~~~~~k~~VIpn-GvD~~~f~p~~~~~~r~~~~~~~~~~~l~~~~~~~~~ 539 (783)
..+.+.+ -|++ +.++.++.| ++|.-....... .....+.
T Consensus 155 ~~~~L~~--------------------eg~~--~~~i~~tG~~~iD~l~~~~~~~------------------~~~~~~~ 194 (365)
T TIGR03568 155 YRQRVIQ--------------------MGED--PDRVFNVGSPGLDNILSLDLLS------------------KEELEEK 194 (365)
T ss_pred HHHHHHH--------------------cCCC--CCcEEEECCcHHHHHHhhhccC------------------HHHHHHH
Confidence 6653221 1333 556766654 666432211111 1123345
Q ss_pred hccccCCCCcE-EEEEeccc--CCCCHHHHHHHHHHhHccCCCeEEEEEeC--CCCCCCccHHHHHHHHHHHHHHHHcCC
Q 003962 540 LCVLKDRNKPI-LFTMARLD--RVKNLTGLVEWYGKNAKLRELVNLVVVGG--DRRKESKDLEEQAEMKKMYSLIDQYKL 614 (783)
Q Consensus 540 ~gll~~~~k~i-Il~vGRL~--~~Kgl~~LieA~~~l~~~~~~~~LvIVG~--g~~~~~~~~ee~~~~~~l~~li~~~~L 614 (783)
+|+ +.++++ ++.+-|-. .....+.+.+.+..+.+...++ +++.. ++.. ....+.+.++...
T Consensus 195 lgl--~~~~~~vlvt~Hp~~~~~~~~~~~l~~li~~L~~~~~~~--~vi~P~~~p~~-------~~i~~~i~~~~~~--- 260 (365)
T TIGR03568 195 LGI--DLDKPYALVTFHPVTLEKESAEEQIKELLKALDELNKNY--IFTYPNADAGS-------RIINEAIEEYVNE--- 260 (365)
T ss_pred hCC--CCCCCEEEEEeCCCcccccCchHHHHHHHHHHHHhccCC--EEEEeCCCCCc-------hHHHHHHHHHhcC---
Confidence 666 433334 44454432 3333344444444444332334 44432 2221 0112233333211
Q ss_pred CCcEEEccCCCCcCChHHHHHHHHccCcEEEeCCCCCCCcHHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHH
Q 003962 615 NGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGE 694 (783)
Q Consensus 615 ~~~V~flG~~~~~~~~~el~~~ia~aadvfV~PS~~E~fGltvlEAMa~GlPVVat~~GG~~EiI~dg~~G~li~p~d~e 694 (783)
.++|.+++ .++..++..+++. |+++|--|. | .+.||.++|+|||+ .|.-+|.+..|.+++++ +.|++
T Consensus 261 ~~~v~l~~----~l~~~~~l~Ll~~-a~~vitdSS----g-gi~EA~~lg~Pvv~--l~~R~e~~~~g~nvl~v-g~~~~ 327 (365)
T TIGR03568 261 HPNFRLFK----SLGQERYLSLLKN-ADAVIGNSS----S-GIIEAPSFGVPTIN--IGTRQKGRLRADSVIDV-DPDKE 327 (365)
T ss_pred CCCEEEEC----CCChHHHHHHHHh-CCEEEEcCh----h-HHHhhhhcCCCEEe--ecCCchhhhhcCeEEEe-CCCHH
Confidence 46799999 7888999999996 999985432 3 34899999999995 45678888888888888 55899
Q ss_pred HHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHH
Q 003962 695 QAAEILVDFFEKCKADPSYWDKISLGGLKRIEEKYTWKIYSQRLLTL 741 (783)
Q Consensus 695 ~lAeaI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~~~a~~ll~l 741 (783)
++.+++.++ .+++.++.+ ......|.....++++.++
T Consensus 328 ~I~~a~~~~-----~~~~~~~~~-----~~~~~pygdg~as~rI~~~ 364 (365)
T TIGR03568 328 EIVKAIEKL-----LDPAFKKSL-----KNVKNPYGDGNSSERIIEI 364 (365)
T ss_pred HHHHHHHHH-----hChHHHHHH-----hhCCCCCCCChHHHHHHHh
Confidence 999998663 344433332 1222457666677776553
No 116
>PF13477 Glyco_trans_4_2: Glycosyl transferase 4-like
Probab=98.52 E-value=1.8e-06 Score=82.12 Aligned_cols=123 Identities=23% Similarity=0.236 Sum_probs=76.8
Q ss_pred HHHHHHHHCCCceeeceeEEeCCCCCCCCCcccceeeeecCccCeEEEEeccCCCccccccccccccchhhHHHHHHHHH
Q 003962 294 EMLLRIKQQGLDITPQILIITRLLPDAVGTTCGQRLEKVYGTKYSDILRVPFRTEKGVVRKWISRFEVWPYLETYTEDVA 373 (783)
Q Consensus 294 eLa~~L~~~GheV~~~i~VvT~~~~~~~g~~~~~~~e~i~~~~~v~Ilrvp~~~~~~~~~~~isr~~i~~~l~~f~~~~~ 373 (783)
.+++.|+++|++|+ ++|..... +......++.+.+++.... ..++++. +. ..
T Consensus 15 ~~~~~L~~~g~~V~----ii~~~~~~----------~~~~~~~~i~~~~~~~~~k-----------~~~~~~~-~~-~l- 66 (139)
T PF13477_consen 15 NLAKELKKRGYDVH----IITPRNDY----------EKYEIIEGIKVIRLPSPRK-----------SPLNYIK-YF-RL- 66 (139)
T ss_pred HHHHHHHHCCCEEE----EEEcCCCc----------hhhhHhCCeEEEEecCCCC-----------ccHHHHH-HH-HH-
Confidence 56677899999999 98874321 1112234678888764321 1344442 21 22
Q ss_pred HHHHHHcCCCceEEEEcCCCc-hHHHHHHHHhcC-CcEEEEecCCCccCCCCCchhhhhccccccccchhhHhHHhhhcC
Q 003962 374 VEIAKELQGKPDLIIGNYSDG-NIVASLLAHKLG-VTQCTIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHT 451 (783)
Q Consensus 374 ~~l~~~l~~~pDIIh~h~~~~-~lva~llar~lg-vp~v~t~H~l~~~~~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~A 451 (783)
..+.+ +.+|||||+|...+ ++++.++++..+ +|++++.|+..... .+. ..+ +. ....+.+++.|
T Consensus 67 ~k~ik--~~~~DvIh~h~~~~~~~~~~l~~~~~~~~~~i~~~hg~~~~~--~~~-~~~-------~~--~~~~~~~~k~~ 132 (139)
T PF13477_consen 67 RKIIK--KEKPDVIHCHTPSPYGLFAMLAKKLLKNKKVIYTVHGSDFYN--SSK-KKK-------LK--KFIIKFAFKRA 132 (139)
T ss_pred HHHhc--cCCCCEEEEecCChHHHHHHHHHHHcCCCCEEEEecCCeeec--CCc-hHH-------HH--HHHHHHHHHhC
Confidence 23333 25799999999886 788888889998 99999999864311 110 000 00 11345688999
Q ss_pred CEEEcCC
Q 003962 452 DFIITST 458 (783)
Q Consensus 452 D~IIt~S 458 (783)
|.|++.|
T Consensus 133 ~~ii~~~ 139 (139)
T PF13477_consen 133 DKIIVQS 139 (139)
T ss_pred CEEEEcC
Confidence 9999865
No 117
>COG1519 KdtA 3-deoxy-D-manno-octulosonic-acid transferase [Cell envelope biogenesis, outer membrane]
Probab=98.42 E-value=0.00019 Score=79.58 Aligned_cols=156 Identities=16% Similarity=0.145 Sum_probs=114.6
Q ss_pred CcEEEEEecccCCCCHHHHHHHHHHhHccCCCeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHHcCCC------------
Q 003962 548 KPILFTMARLDRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLN------------ 615 (783)
Q Consensus 548 k~iIl~vGRL~~~Kgl~~LieA~~~l~~~~~~~~LvIVG~g~~~~~~~~ee~~~~~~l~~li~~~~L~------------ 615 (783)
+++++..+. ...--+.+++++..+++.+|++.+++|=..|+ -.+.++++++..|+.
T Consensus 231 r~v~iaaST--H~GEeei~l~~~~~l~~~~~~~llIlVPRHpE----------Rf~~v~~l~~~~gl~~~~rS~~~~~~~ 298 (419)
T COG1519 231 RPVWVAAST--HEGEEEIILDAHQALKKQFPNLLLILVPRHPE----------RFKAVENLLKRKGLSVTRRSQGDPPFS 298 (419)
T ss_pred CceEEEecC--CCchHHHHHHHHHHHHhhCCCceEEEecCChh----------hHHHHHHHHHHcCCeEEeecCCCCCCC
Confidence 777777777 33445678999999999999999999988875 357788888888772
Q ss_pred CcEEEccCCCCcCChHHHHHHHHccCcEE-EeCCCCCCCcHHHHHHHHcCCcEEEc----CccccccccccCceEEEECC
Q 003962 616 GQFRWISSQMNRVRNGELYRYICDTKGAF-VQPALYEAFGLTVVEAMTCGLPTFAT----CKGGPAEIIVNGKSGYHIDP 690 (783)
Q Consensus 616 ~~V~flG~~~~~~~~~el~~~ia~aadvf-V~PS~~E~fGltvlEAMa~GlPVVat----~~GG~~EiI~dg~~G~li~p 690 (783)
+.=.++| | ..+|+..+|.- +|+. |--|+.+--|--.+|+.++|+|||.- +...+.+-+...+.|+.++
T Consensus 299 ~tdV~l~---D--tmGEL~l~y~~-adiAFVGGSlv~~GGHN~LEpa~~~~pvi~Gp~~~Nf~ei~~~l~~~ga~~~v~- 371 (419)
T COG1519 299 DTDVLLG---D--TMGELGLLYGI-ADIAFVGGSLVPIGGHNPLEPAAFGTPVIFGPYTFNFSDIAERLLQAGAGLQVE- 371 (419)
T ss_pred CCcEEEE---e--cHhHHHHHHhh-ccEEEECCcccCCCCCChhhHHHcCCCEEeCCccccHHHHHHHHHhcCCeEEEC-
Confidence 1113344 2 46899998884 7754 44566655566799999999999985 3334444444555788887
Q ss_pred CCHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHH
Q 003962 691 YHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEE 727 (783)
Q Consensus 691 ~d~e~lAeaI~~~l~~l~~dp~~~~~ms~~a~~~v~~ 727 (783)
|.+.+++++ +.+..|++.+++|++++...+.+
T Consensus 372 -~~~~l~~~v----~~l~~~~~~r~~~~~~~~~~v~~ 403 (419)
T COG1519 372 -DADLLAKAV----ELLLADEDKREAYGRAGLEFLAQ 403 (419)
T ss_pred -CHHHHHHHH----HHhcCCHHHHHHHHHHHHHHHHH
Confidence 577777777 44558899999999999998854
No 118
>PF02350 Epimerase_2: UDP-N-acetylglucosamine 2-epimerase; InterPro: IPR003331 UDP-N-acetylglucosamine 2-epimerase 5.1.3.14 from EC catalyses the production of UDP-ManNAc from UDP-GlcNAc. Some of the enzymes is this family are bifunctional. In microorganisms the epimerase is involved in in the synthesis of the capsule precursor UDP-ManNAcA [, ]. The protein from rat liver displays both epimerase and kinase activity [].; GO: 0008761 UDP-N-acetylglucosamine 2-epimerase activity, 0006047 UDP-N-acetylglucosamine metabolic process, 0009103 lipopolysaccharide biosynthetic process; PDB: 1V4V_B 3BEO_B 3DZC_B 3OT5_B 1O6C_B 1VGV_D 1F6D_C.
Probab=98.40 E-value=2.3e-05 Score=87.04 Aligned_cols=271 Identities=16% Similarity=0.175 Sum_probs=143.6
Q ss_pred CceEEEEcCCCc-hHHHHHHHHhcCCcEEEEecCCCccCCCCCchhhhhccccccccchhhHhHHhhhcCCEEEcCCHHH
Q 003962 383 KPDLIIGNYSDG-NIVASLLAHKLGVTQCTIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTFQE 461 (783)
Q Consensus 383 ~pDIIh~h~~~~-~lva~llar~lgvp~v~t~H~l~~~~~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~ 461 (783)
+||+|..+.-.. .+.++++|..+++|++..--++-... ..-...+...+ ...-+-||.-+++|+..
T Consensus 67 ~Pd~Vlv~GD~~~~la~alaA~~~~ipv~HieaGlRs~d-----~~~g~~de~~R--------~~i~~la~lhf~~t~~~ 133 (346)
T PF02350_consen 67 KPDAVLVLGDRNEALAAALAAFYLNIPVAHIEAGLRSGD-----RTEGMPDEINR--------HAIDKLAHLHFAPTEEA 133 (346)
T ss_dssp T-SEEEEETTSHHHHHHHHHHHHTT-EEEEES-----S------TTSSTTHHHHH--------HHHHHH-SEEEESSHHH
T ss_pred CCCEEEEEcCCchHHHHHHHHHHhCCCEEEecCCCCccc-----cCCCCchhhhh--------hhhhhhhhhhccCCHHH
Confidence 799999887665 67889999999999554433332111 00001111111 12345789999999887
Q ss_pred HhhccccccccccccccccccceeeeccCCCCCCcEEEecC-CccCCCCCCCchHHHhhccCchhhHHhhcChhhhhhhh
Q 003962 462 IAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSP-GADMSIYFPYTEEKRRLKSFHPEIEELLYSDVENKEHL 540 (783)
Q Consensus 462 ~~~~~~~v~qy~~~~~f~~p~l~~v~~gi~~~~~k~~VIpn-GvD~~~f~p~~~~~~r~~~~~~~~~~~l~~~~~~~~~~ 540 (783)
++.+.+. |++ +.++.++.| ++|.-. ....... +.. ...
T Consensus 134 ~~~L~~~--------------------G~~--~~rI~~vG~~~~D~l~-----~~~~~~~---~~~-----------~~~ 172 (346)
T PF02350_consen 134 RERLLQE--------------------GEP--PERIFVVGNPGIDALL-----QNKEEIE---EKY-----------KNS 172 (346)
T ss_dssp HHHHHHT--------------------T----GGGEEE---HHHHHHH-----HHHHTTC---C-H-----------HHH
T ss_pred HHHHHhc--------------------CCC--CCeEEEEChHHHHHHH-----HhHHHHh---hhh-----------hhH
Confidence 7643332 454 678888765 444220 0000000 000 001
Q ss_pred ccccCCCCcE-EEEEecccC---CCCHHHHHHHHHHhHccCCCeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHHcCCCC
Q 003962 541 CVLKDRNKPI-LFTMARLDR---VKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLNG 616 (783)
Q Consensus 541 gll~~~~k~i-Il~vGRL~~---~Kgl~~LieA~~~l~~~~~~~~LvIVG~g~~~~~~~~ee~~~~~~l~~li~~~~L~~ 616 (783)
++.....+++ +++.=|... ......+.+++..+.+. +++.+++.....+ .....+.+..+++ +
T Consensus 173 ~i~~~~~~~~iLvt~H~~t~~~~~~~~~~i~~~l~~L~~~-~~~~vi~~~hn~p---------~~~~~i~~~l~~~---~ 239 (346)
T PF02350_consen 173 GILQDAPKPYILVTLHPVTNEDNPERLEQILEALKALAER-QNVPVIFPLHNNP---------RGSDIIIEKLKKY---D 239 (346)
T ss_dssp HHHHCTTSEEEEEE-S-CCCCTHH--HHHHHHHHHHHHHH-TTEEEEEE--S-H---------HHHHHHHHHHTT----T
T ss_pred HHHhccCCCEEEEEeCcchhcCChHHHHHHHHHHHHHHhc-CCCcEEEEecCCc---------hHHHHHHHHhccc---C
Confidence 2211234444 444434433 34567888888888876 7898998887544 2234445555544 3
Q ss_pred cEEEccCCCCcCChHHHHHHHHccCcEEEeCCCCCCCcHHHH-HHHHcCCcEEEc-CccccccccccCceEEEECCCCHH
Q 003962 617 QFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVV-EAMTCGLPTFAT-CKGGPAEIIVNGKSGYHIDPYHGE 694 (783)
Q Consensus 617 ~V~flG~~~~~~~~~el~~~ia~aadvfV~PS~~E~fGltvl-EAMa~GlPVVat-~~GG~~EiI~dg~~G~li~p~d~e 694 (783)
+++++. .+...+++.+++. +++.|-= .| .+. ||.++|+|||.- +.|--.+-+..+.+-+ +. .|++
T Consensus 240 ~v~~~~----~l~~~~~l~ll~~-a~~vvgd-----Ss-GI~eEa~~lg~P~v~iR~~geRqe~r~~~~nvl-v~-~~~~ 306 (346)
T PF02350_consen 240 NVRLIE----PLGYEEYLSLLKN-ADLVVGD-----SS-GIQEEAPSLGKPVVNIRDSGERQEGRERGSNVL-VG-TDPE 306 (346)
T ss_dssp TEEEE--------HHHHHHHHHH-ESEEEES-----SH-HHHHHGGGGT--EEECSSS-S-HHHHHTTSEEE-ET-SSHH
T ss_pred CEEEEC----CCCHHHHHHHHhc-ceEEEEc-----Cc-cHHHHHHHhCCeEEEecCCCCCHHHHhhcceEE-eC-CCHH
Confidence 899998 7888999999996 8888753 35 677 999999999998 5555677777776555 76 6899
Q ss_pred HHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Q 003962 695 QAAEILVDFFEKCKADPSYWDKISLGGLKRIEEKYTWKIYSQRLLTLT 742 (783)
Q Consensus 695 ~lAeaI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~~~a~~ll~ly 742 (783)
++.++|.+++ .+++.+.++.. ....|.-...++++.++.
T Consensus 307 ~I~~ai~~~l----~~~~~~~~~~~-----~~npYgdG~as~rI~~~L 345 (346)
T PF02350_consen 307 AIIQAIEKAL----SDKDFYRKLKN-----RPNPYGDGNASERIVEIL 345 (346)
T ss_dssp HHHHHHHHHH----H-HHHHHHHHC-----S--TT-SS-HHHHHHHHH
T ss_pred HHHHHHHHHH----hChHHHHhhcc-----CCCCCCCCcHHHHHHHhh
Confidence 9999997766 45444443321 123565555566655543
No 119
>TIGR00661 MJ1255 conserved hypothetical protein. This model represents nearly the full length of MJ1255 from Methanococcus jannaschii and of an unpublished protein from Vibrio cholerae, as well as the C-terminal half of a protein from Methanobacterium thermoautotrophicum. A small region (~50 amino acids) within the domain appears related to a family of sugar transferases.
Probab=98.35 E-value=6e-05 Score=82.66 Aligned_cols=69 Identities=13% Similarity=0.046 Sum_probs=51.3
Q ss_pred CCcEEEccCCCCcCChHHHHHHHHccCcEEEeCCCCCCCcHHHHHHHHcCCcEEEcCcccccc------ccccCceEEEE
Q 003962 615 NGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAE------IIVNGKSGYHI 688 (783)
Q Consensus 615 ~~~V~flG~~~~~~~~~el~~~ia~aadvfV~PS~~E~fGltvlEAMa~GlPVVat~~GG~~E------iI~dg~~G~li 688 (783)
.+++.+.+ +.+ +++..+|.. +|++|.-+- ..++.||+++|+|++.....+..| .+++...|..+
T Consensus 228 ~~~v~~~~----~~~-~~~~~~l~~-ad~vI~~~G----~~t~~Ea~~~g~P~l~ip~~~~~eQ~~na~~l~~~g~~~~l 297 (321)
T TIGR00661 228 NENVEIRR----ITT-DNFKELIKN-AELVITHGG----FSLISEALSLGKPLIVIPDLGQFEQGNNAVKLEDLGCGIAL 297 (321)
T ss_pred CCCEEEEE----CCh-HHHHHHHHh-CCEEEECCC----hHHHHHHHHcCCCEEEEcCCCcccHHHHHHHHHHCCCEEEc
Confidence 46888887 333 578888885 999998753 247999999999999987765434 34555678888
Q ss_pred CCCCH
Q 003962 689 DPYHG 693 (783)
Q Consensus 689 ~p~d~ 693 (783)
+..+.
T Consensus 298 ~~~~~ 302 (321)
T TIGR00661 298 EYKEL 302 (321)
T ss_pred ChhhH
Confidence 76666
No 120
>PHA03392 egt ecdysteroid UDP-glucosyltransferase; Provisional
Probab=98.32 E-value=0.00033 Score=81.71 Aligned_cols=139 Identities=14% Similarity=0.038 Sum_probs=89.8
Q ss_pred CcEEEEEecccCC-----CCHHHHHHHHHHhHccCCCeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHHcCCCCcEEEcc
Q 003962 548 KPILFTMARLDRV-----KNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLNGQFRWIS 622 (783)
Q Consensus 548 k~iIl~vGRL~~~-----Kgl~~LieA~~~l~~~~~~~~LvIVG~g~~~~~~~~ee~~~~~~l~~li~~~~L~~~V~flG 622 (783)
.+++++.|..... +-+..+++|++++ + .++++..++... . .++++||.+.+
T Consensus 297 g~V~vS~GS~~~~~~~~~~~~~~~l~a~~~l----~-~~viw~~~~~~~-----------~--------~~~p~Nv~i~~ 352 (507)
T PHA03392 297 GVVYVSFGSSIDTNDMDNEFLQMLLRTFKKL----P-YNVLWKYDGEVE-----------A--------INLPANVLTQK 352 (507)
T ss_pred cEEEEECCCCCcCCCCCHHHHHHHHHHHHhC----C-CeEEEEECCCcC-----------c--------ccCCCceEEec
Confidence 4678899987532 2345666666654 3 466665554221 0 24578999988
Q ss_pred CCCCcCChHHHHHHHHccCcEEEeCCCCCCCcHHHHHHHHcCCcEEEcCcc----ccccccccCceEEEECCC--CHHHH
Q 003962 623 SQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKG----GPAEIIVNGKSGYHIDPY--HGEQA 696 (783)
Q Consensus 623 ~~~~~~~~~el~~~ia~aadvfV~PS~~E~fGltvlEAMa~GlPVVat~~G----G~~EiI~dg~~G~li~p~--d~e~l 696 (783)
+++..++... . .+++||.= |=..++.||+.+|+|+|+.... ..+..++.-+.|..++.. +.+++
T Consensus 353 ----w~Pq~~lL~h-p-~v~~fItH----GG~~s~~Eal~~GvP~v~iP~~~DQ~~Na~rv~~~G~G~~l~~~~~t~~~l 422 (507)
T PHA03392 353 ----WFPQRAVLKH-K-NVKAFVTQ----GGVQSTDEAIDALVPMVGLPMMGDQFYNTNKYVELGIGRALDTVTVSAAQL 422 (507)
T ss_pred ----CCCHHHHhcC-C-CCCEEEec----CCcccHHHHHHcCCCEEECCCCccHHHHHHHHHHcCcEEEeccCCcCHHHH
Confidence 7777776531 1 37788863 3345899999999999997443 344455555578887754 56778
Q ss_pred HHHHHHHHHHhhCCHHHHHHHHHHHHHH
Q 003962 697 AEILVDFFEKCKADPSYWDKISLGGLKR 724 (783)
Q Consensus 697 AeaI~~~l~~l~~dp~~~~~ms~~a~~~ 724 (783)
.++|.+++ +||++++...+-+...
T Consensus 423 ~~ai~~vl----~~~~y~~~a~~ls~~~ 446 (507)
T PHA03392 423 VLAIVDVI----ENPKYRKNLKELRHLI 446 (507)
T ss_pred HHHHHHHh----CCHHHHHHHHHHHHHH
Confidence 88886555 8988877665554443
No 121
>PF13844 Glyco_transf_41: Glycosyl transferase family 41; PDB: 3PE4_C 3PE3_D 3TAX_C 2XGO_A 2JLB_B 2XGM_A 2VSY_B 2XGS_B 2VSN_A.
Probab=98.26 E-value=2.4e-05 Score=88.90 Aligned_cols=184 Identities=13% Similarity=0.089 Sum_probs=119.7
Q ss_pred hhhhhhccccCCCCcEEEEEecccCCCCHHHHHHHHHHhHccCCCeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHHcCC
Q 003962 535 ENKEHLCVLKDRNKPILFTMARLDRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKL 614 (783)
Q Consensus 535 ~~~~~~gll~~~~k~iIl~vGRL~~~Kgl~~LieA~~~l~~~~~~~~LvIVG~g~~~~~~~~ee~~~~~~l~~li~~~~L 614 (783)
..|+.+|+ +++..++++..++ .|=-+..++++.++.+.-|+.+|++...... ..+.+++.+.+.|+
T Consensus 274 ~~R~~~gL--p~d~vvF~~fn~~--~KI~p~~l~~W~~IL~~vP~S~L~L~~~~~~----------~~~~l~~~~~~~Gv 339 (468)
T PF13844_consen 274 TTRAQYGL--PEDAVVFGSFNNL--FKISPETLDLWARILKAVPNSRLWLLRFPAS----------GEARLRRRFAAHGV 339 (468)
T ss_dssp EETGGGT----SSSEEEEE-S-G--GG--HHHHHHHHHHHHHSTTEEEEEEETSTT----------HHHHHHHHHHHTTS
T ss_pred cCHHHcCC--CCCceEEEecCcc--ccCCHHHHHHHHHHHHhCCCcEEEEeeCCHH----------HHHHHHHHHHHcCC
Confidence 45788999 6676666666665 4556888999999999899999999875432 13567888889998
Q ss_pred C-CcEEEccCCCCcCChHHHHHHHHccCcEEEeCCCCCCCcHHHHHHHHcCCcEEEcCcccccc-----ccc-cCceEEE
Q 003962 615 N-GQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAE-----IIV-NGKSGYH 687 (783)
Q Consensus 615 ~-~~V~flG~~~~~~~~~el~~~ia~aadvfV~PS~~E~fGltvlEAMa~GlPVVat~~GG~~E-----iI~-dg~~G~l 687 (783)
. +++.|.+ ..+.++..+.+.. +|+++=|-. =+-|.|.+||+.+|+|||+-.-..... ++. -|-..++
T Consensus 340 ~~~Ri~f~~----~~~~~ehl~~~~~-~DI~LDT~p-~nG~TTt~dALwmGVPvVTl~G~~~~sR~~aSiL~~lGl~ElI 413 (468)
T PF13844_consen 340 DPDRIIFSP----VAPREEHLRRYQL-ADICLDTFP-YNGGTTTLDALWMGVPVVTLPGETMASRVGASILRALGLPELI 413 (468)
T ss_dssp -GGGEEEEE-------HHHHHHHGGG--SEEE--SS-S--SHHHHHHHHHT--EEB---SSGGGSHHHHHHHHHT-GGGB
T ss_pred ChhhEEEcC----CCCHHHHHHHhhh-CCEEeeCCC-CCCcHHHHHHHHcCCCEEeccCCCchhHHHHHHHHHcCCchhc
Confidence 6 7899998 5666777777775 999998743 334689999999999999864222222 111 1323333
Q ss_pred ECCCCHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHh--CCHHHHHHHHHHHHHH
Q 003962 688 IDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEEK--YTWKIYSQRLLTLTGV 744 (783)
Q Consensus 688 i~p~d~e~lAeaI~~~l~~l~~dp~~~~~ms~~a~~~v~~~--ysw~~~a~~ll~ly~~ 744 (783)
.. |.++..+.-.++ ..|++.+++++++-++...+. |+-..+++++++.|+.
T Consensus 414 A~--s~~eYv~~Av~L----a~D~~~l~~lR~~Lr~~~~~SpLfd~~~~ar~lE~a~~~ 466 (468)
T PF13844_consen 414 AD--SEEEYVEIAVRL----ATDPERLRALRAKLRDRRSKSPLFDPKRFARNLEAAYRQ 466 (468)
T ss_dssp -S--SHHHHHHHHHHH----HH-HHHHHHHHHHHHHHHHHSGGG-HHHHHHHHHHHHHH
T ss_pred CC--CHHHHHHHHHHH----hCCHHHHHHHHHHHHHHHhhCCCCCHHHHHHHHHHHHHH
Confidence 43 788888877554 489999999999998876443 8999999999998864
No 122
>TIGR03590 PseG pseudaminic acid biosynthesis-associated protein PseG. This protein is found in association with enzymes involved in the biosynthesis of pseudaminic acid, a component of polysaccharide in certain Pseudomonas strains as well as a modification of flagellin in Campylobacter and Hellicobacter. The role of this protein is unclear, although it may participate in N-acetylation in conjunction with, or in the absence of PseH (TIGR03585) as it often scores above the trusted cutoff to pfam00583 representing a family of acetyltransferases.
Probab=98.24 E-value=0.00012 Score=78.87 Aligned_cols=98 Identities=14% Similarity=0.250 Sum_probs=70.1
Q ss_pred CcEEEEEecccCCCCHHHHHHHHHHhHccCCCeEE-EEEeCCCCCCCccHHHHHHHHHHHHHHHHcCCCCcEEEccCCCC
Q 003962 548 KPILFTMARLDRVKNLTGLVEWYGKNAKLRELVNL-VVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMN 626 (783)
Q Consensus 548 k~iIl~vGRL~~~Kgl~~LieA~~~l~~~~~~~~L-vIVG~g~~~~~~~~ee~~~~~~l~~li~~~~L~~~V~flG~~~~ 626 (783)
+.+++++|..++.+....+++++.++. +++++ +++|.+... .+++++.++.. +++++.++
T Consensus 171 ~~iLi~~GG~d~~~~~~~~l~~l~~~~---~~~~i~vv~G~~~~~----------~~~l~~~~~~~---~~i~~~~~--- 231 (279)
T TIGR03590 171 RRVLVSFGGADPDNLTLKLLSALAESQ---INISITLVTGSSNPN----------LDELKKFAKEY---PNIILFID--- 231 (279)
T ss_pred CeEEEEeCCcCCcCHHHHHHHHHhccc---cCceEEEEECCCCcC----------HHHHHHHHHhC---CCEEEEeC---
Confidence 457999999998776677888887653 34443 355655321 24556665543 47888873
Q ss_pred cCChHHHHHHHHccCcEEEeCCCCCCCcHHHHHHHHcCCcEEEcCcc
Q 003962 627 RVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKG 673 (783)
Q Consensus 627 ~~~~~el~~~ia~aadvfV~PS~~E~fGltvlEAMa~GlPVVat~~G 673 (783)
..++..+|+. +|++|.+ .|.|+.|++++|+|+|+....
T Consensus 232 ---~~~m~~lm~~-aDl~Is~-----~G~T~~E~~a~g~P~i~i~~~ 269 (279)
T TIGR03590 232 ---VENMAELMNE-ADLAIGA-----AGSTSWERCCLGLPSLAICLA 269 (279)
T ss_pred ---HHHHHHHHHH-CCEEEEC-----CchHHHHHHHcCCCEEEEEec
Confidence 3468888885 9999984 679999999999999987553
No 123
>PF04007 DUF354: Protein of unknown function (DUF354); InterPro: IPR007152 Members of this family are around 350 amino acids in length. They are found in archaea and some bacteria and have no known function.
Probab=97.99 E-value=0.0012 Score=72.73 Aligned_cols=62 Identities=13% Similarity=0.168 Sum_probs=43.3
Q ss_pred HHHHHccCcEEEeCCCCCCCcHHHHHHHHcCCcEEEcCccc---cccccccCceEEEECCCCHHHHHHHHHHH
Q 003962 634 YRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGG---PAEIIVNGKSGYHIDPYHGEQAAEILVDF 703 (783)
Q Consensus 634 ~~~ia~aadvfV~PS~~E~fGltvlEAMa~GlPVVat~~GG---~~EiI~dg~~G~li~p~d~e~lAeaI~~~ 703 (783)
..+++- ||++|- +-|....||...|+|+|.+..|- .-+... +.|+++.-.|++++.+.+...
T Consensus 243 ~~Ll~~-a~l~Ig-----~ggTMa~EAA~LGtPaIs~~~g~~~~vd~~L~--~~Gll~~~~~~~ei~~~v~~~ 307 (335)
T PF04007_consen 243 LDLLYY-ADLVIG-----GGGTMAREAALLGTPAISCFPGKLLAVDKYLI--EKGLLYHSTDPDEIVEYVRKN 307 (335)
T ss_pred HHHHHh-cCEEEe-----CCcHHHHHHHHhCCCEEEecCCcchhHHHHHH--HCCCeEecCCHHHHHHHHHHh
Confidence 355554 889985 34667899999999999875442 222232 347788888999988866443
No 124
>COG1819 Glycosyl transferases, related to UDP-glucuronosyltransferase [Carbohydrate transport and metabolism / Signal transduction mechanisms]
Probab=97.98 E-value=0.00045 Score=78.36 Aligned_cols=158 Identities=17% Similarity=0.133 Sum_probs=103.1
Q ss_pred CCCcEEEEEecccCCCCHHHHHHHHHHhHccCCCeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHHcCCCCcEEEccCCC
Q 003962 546 RNKPILFTMARLDRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQM 625 (783)
Q Consensus 546 ~~k~iIl~vGRL~~~Kgl~~LieA~~~l~~~~~~~~LvIVG~g~~~~~~~~ee~~~~~~l~~li~~~~L~~~V~flG~~~ 625 (783)
..+++.++.|..... .+.+-.+...+.+ -++++++..++.+. ..-++++++...+
T Consensus 236 d~~~vyvslGt~~~~--~~l~~~~~~a~~~--l~~~vi~~~~~~~~------------------~~~~~p~n~~v~~--- 290 (406)
T COG1819 236 DRPIVYVSLGTVGNA--VELLAIVLEALAD--LDVRVIVSLGGARD------------------TLVNVPDNVIVAD--- 290 (406)
T ss_pred CCCeEEEEcCCcccH--HHHHHHHHHHHhc--CCcEEEEecccccc------------------ccccCCCceEEec---
Confidence 345566777876654 3333333333333 25677777765221 1225678899888
Q ss_pred CcCChHHHHHHHHccCcEEEeCCCCCCCcHHHHHHHHcCCcEEEcCcc----ccccccccCceEEEEC--CCCHHHHHHH
Q 003962 626 NRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKG----GPAEIIVNGKSGYHID--PYHGEQAAEI 699 (783)
Q Consensus 626 ~~~~~~el~~~ia~aadvfV~PS~~E~fGltvlEAMa~GlPVVat~~G----G~~EiI~dg~~G~li~--p~d~e~lAea 699 (783)
.++..++.. .+|++|+. -|+| ++.||+..|+|+|+-..+ ..++-+++-..|..+. .-+.+.++++
T Consensus 291 -~~p~~~~l~----~ad~vI~h---GG~g-tt~eaL~~gvP~vv~P~~~DQ~~nA~rve~~G~G~~l~~~~l~~~~l~~a 361 (406)
T COG1819 291 -YVPQLELLP----RADAVIHH---GGAG-TTSEALYAGVPLVVIPDGADQPLNAERVEELGAGIALPFEELTEERLRAA 361 (406)
T ss_pred -CCCHHHHhh----hcCEEEec---CCcc-hHHHHHHcCCCEEEecCCcchhHHHHHHHHcCCceecCcccCCHHHHHHH
Confidence 777777666 69999986 3444 899999999999997444 3455666667887776 5789999999
Q ss_pred HHHHHHHhhCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Q 003962 700 LVDFFEKCKADPSYWDKISLGGLKRIEEKYTWKIYSQRLLTLT 742 (783)
Q Consensus 700 I~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~~~a~~ll~ly 742 (783)
|.+++ .|+.+++...+.. +...+.-.-+..++.++++.
T Consensus 362 v~~vL----~~~~~~~~~~~~~-~~~~~~~g~~~~a~~le~~~ 399 (406)
T COG1819 362 VNEVL----ADDSYRRAAERLA-EEFKEEDGPAKAADLLEEFA 399 (406)
T ss_pred HHHHh----cCHHHHHHHHHHH-HHhhhcccHHHHHHHHHHHH
Confidence 96666 8888766654443 34435555555555555543
No 125
>PLN02448 UDP-glycosyltransferase family protein
Probab=97.95 E-value=0.0086 Score=69.19 Aligned_cols=138 Identities=11% Similarity=0.090 Sum_probs=77.9
Q ss_pred CCcEEEEEecccC--CCCHHHHHHHHHHhHccCCCeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHHcCCCCcEEEccCC
Q 003962 547 NKPILFTMARLDR--VKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQ 624 (783)
Q Consensus 547 ~k~iIl~vGRL~~--~Kgl~~LieA~~~l~~~~~~~~LvIVG~g~~~~~~~~ee~~~~~~l~~li~~~~L~~~V~flG~~ 624 (783)
+..+.++.|.... .+-+..++++++.. +..++++..+.. ..+.+.. .+++...+
T Consensus 274 ~~vvyvsfGs~~~~~~~~~~~~~~~l~~~-----~~~~lw~~~~~~------------~~~~~~~-----~~~~~v~~-- 329 (459)
T PLN02448 274 GSVLYVSLGSFLSVSSAQMDEIAAGLRDS-----GVRFLWVARGEA------------SRLKEIC-----GDMGLVVP-- 329 (459)
T ss_pred CceEEEeecccccCCHHHHHHHHHHHHhC-----CCCEEEEEcCch------------hhHhHhc-----cCCEEEec--
Confidence 4467788888743 22244444444432 456777655421 1111111 24666666
Q ss_pred CCcCChHHHHHHHHccCcE--EEeCCCCCCCcHHHHHHHHcCCcEEEcCcc----ccccccccC-ceEEEEC-------C
Q 003962 625 MNRVRNGELYRYICDTKGA--FVQPALYEAFGLTVVEAMTCGLPTFATCKG----GPAEIIVNG-KSGYHID-------P 690 (783)
Q Consensus 625 ~~~~~~~el~~~ia~aadv--fV~PS~~E~fGltvlEAMa~GlPVVat~~G----G~~EiI~dg-~~G~li~-------p 690 (783)
+++..++.. ..++ ||.= +=-++++||+++|+|+|+-... ..+..+.+. ..|+-+. .
T Consensus 330 --w~pQ~~iL~----h~~v~~fvtH----gG~nS~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~G~~~~~~~~~~~~ 399 (459)
T PLN02448 330 --WCDQLKVLC----HSSVGGFWTH----CGWNSTLEAVFAGVPMLTFPLFWDQPLNSKLIVEDWKIGWRVKREVGEETL 399 (459)
T ss_pred --cCCHHHHhc----cCccceEEec----CchhHHHHHHHcCCCEEeccccccchhhHHHHHHHhCceEEEecccccCCc
Confidence 777777766 2444 6542 2235899999999999997544 334445442 3566553 1
Q ss_pred CCHHHHHHHHHHHHHHhhCCH-HHHHHHHHHHH
Q 003962 691 YHGEQAAEILVDFFEKCKADP-SYWDKISLGGL 722 (783)
Q Consensus 691 ~d~e~lAeaI~~~l~~l~~dp-~~~~~ms~~a~ 722 (783)
-+.+++++++.+++ .|+ +..++|.+++.
T Consensus 400 ~~~~~l~~av~~vl----~~~~~~~~~~r~~a~ 428 (459)
T PLN02448 400 VGREEIAELVKRFM----DLESEEGKEMRRRAK 428 (459)
T ss_pred CcHHHHHHHHHHHh----cCCchhHHHHHHHHH
Confidence 36788888887766 554 33444444444
No 126
>PF02684 LpxB: Lipid-A-disaccharide synthetase; InterPro: IPR003835 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. These enzymes belong to the glycosyltransferase family 19 GT19 from CAZY. Lipid-A-disaccharide synthetase 2.4.1.182 from EC is involved with acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase 2.3.1.129 from EC and tetraacyldisaccharide 4'-kinase 2.7.1.130 from EC in the biosynthesis of the phosphorylated glycolipid, lipid A, in the outer membrane of Escherichia coli and other bacteria. These enzymes catalyse the first disaccharide step in the synthesis of lipid-A-disaccharide.; GO: 0008915 lipid-A-disaccharide synthase activity, 0009245 lipid A biosynthetic process
Probab=97.88 E-value=0.0027 Score=71.02 Aligned_cols=241 Identities=20% Similarity=0.210 Sum_probs=138.1
Q ss_pred CCCceEEEE-cCCCchHHHHHHHHhcCCc--EEEEecCCCccCCCCCchhhhhccccccccchhhHhHHhhhcCCEEEcC
Q 003962 381 QGKPDLIIG-NYSDGNIVASLLAHKLGVT--QCTIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITS 457 (783)
Q Consensus 381 ~~~pDIIh~-h~~~~~lva~llar~lgvp--~v~t~H~l~~~~~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt~ 457 (783)
..+||+++. -+++.|+-....+++.|++ +++-+- ..-+-|+.-. -+..-+..|.++|.
T Consensus 80 ~~~pd~vIlID~pgFNlrlak~lk~~~~~~~viyYI~--------PqvWAWr~~R-----------~~~i~~~~D~ll~i 140 (373)
T PF02684_consen 80 EEKPDVVILIDYPGFNLRLAKKLKKRGIPIKVIYYIS--------PQVWAWRPGR-----------AKKIKKYVDHLLVI 140 (373)
T ss_pred HcCCCEEEEeCCCCccHHHHHHHHHhCCCceEEEEEC--------CceeeeCccH-----------HHHHHHHHhheeEC
Confidence 368999996 4455587666666777777 554332 1233343221 11234577888888
Q ss_pred CHHHHhhccccccccccccccccccceeeeccCCCCCCcEEEecCC-ccCCCCCCCchHHHhhccCchhhHHhhcChhhh
Q 003962 458 TFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPG-ADMSIYFPYTEEKRRLKSFHPEIEELLYSDVEN 536 (783)
Q Consensus 458 S~~~~~~~~~~v~qy~~~~~f~~p~l~~v~~gi~~~~~k~~VIpnG-vD~~~f~p~~~~~~r~~~~~~~~~~~l~~~~~~ 536 (783)
=+-+.+- |. .+|+ +...|.|. +|.-...+... ..
T Consensus 141 fPFE~~~-------y~-------------~~g~-----~~~~VGHPl~d~~~~~~~~~--------------------~~ 175 (373)
T PF02684_consen 141 FPFEPEF-------YK-------------KHGV-----PVTYVGHPLLDEVKPEPDRA--------------------EA 175 (373)
T ss_pred CcccHHH-------Hh-------------ccCC-----CeEEECCcchhhhccCCCHH--------------------HH
Confidence 8766552 11 1222 35555443 33321111111 11
Q ss_pred hhhhccccCCCCcE-EEEEe-cccC-CCCHHHHHHHHHHhHccCCCeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHHcC
Q 003962 537 KEHLCVLKDRNKPI-LFTMA-RLDR-VKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYK 613 (783)
Q Consensus 537 ~~~~gll~~~~k~i-Il~vG-RL~~-~Kgl~~LieA~~~l~~~~~~~~LvIVG~g~~~~~~~~ee~~~~~~l~~li~~~~ 613 (783)
++.+ + ++++++ .+..| |-.+ .+.+..+++++.++.+.+|+.++++...... ..+.+.+.....+
T Consensus 176 ~~~~-l--~~~~~iIaLLPGSR~~EI~rllP~~l~aa~~l~~~~p~l~fvvp~a~~~----------~~~~i~~~~~~~~ 242 (373)
T PF02684_consen 176 REKL-L--DPDKPIIALLPGSRKSEIKRLLPIFLEAAKLLKKQRPDLQFVVPVAPEV----------HEELIEEILAEYP 242 (373)
T ss_pred HHhc-C--CCCCcEEEEeCCCCHHHHHHHHHHHHHHHHHHHHhCCCeEEEEecCCHH----------HHHHHHHHHHhhC
Confidence 2223 3 455654 45566 3444 4566899999999999999999998876522 1223445555555
Q ss_pred CCCcEEEccCCCCcCChHHHHHHHHccCcEEEeCCCCCCCcHHHHHHHHcCCcEEEc-Ccccc----------------c
Q 003962 614 LNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFAT-CKGGP----------------A 676 (783)
Q Consensus 614 L~~~V~flG~~~~~~~~~el~~~ia~aadvfV~PS~~E~fGltvlEAMa~GlPVVat-~~GG~----------------~ 676 (783)
.+-.+.... ++-+..|+. ||+.+.. .|.+.+|++.+|+|.|+. ..+.. +
T Consensus 243 ~~~~~~~~~--------~~~~~~m~~-ad~al~~-----SGTaTLE~Al~g~P~Vv~Yk~~~lt~~iak~lvk~~~isL~ 308 (373)
T PF02684_consen 243 PDVSIVIIE--------GESYDAMAA-ADAALAA-----SGTATLEAALLGVPMVVAYKVSPLTYFIAKRLVKVKYISLP 308 (373)
T ss_pred CCCeEEEcC--------CchHHHHHh-Ccchhhc-----CCHHHHHHHHhCCCEEEEEcCcHHHHHHHHHhhcCCEeech
Confidence 433444432 356777874 8887765 488999999999999986 33222 2
Q ss_pred cccccCc--eEEEECCCCHHHHHHHHHHHHHHhhCCHHHHHH
Q 003962 677 EIIVNGK--SGYHIDPYHGEQAAEILVDFFEKCKADPSYWDK 716 (783)
Q Consensus 677 EiI~dg~--~G~li~p~d~e~lAeaI~~~l~~l~~dp~~~~~ 716 (783)
.++.+.. --++-+..+++.+++++.+++ .|++.++.
T Consensus 309 Niia~~~v~PEliQ~~~~~~~i~~~~~~ll----~~~~~~~~ 346 (373)
T PF02684_consen 309 NIIAGREVVPELIQEDATPENIAAELLELL----ENPEKRKK 346 (373)
T ss_pred hhhcCCCcchhhhcccCCHHHHHHHHHHHh----cCHHHHHH
Confidence 2222211 112223457889999886665 78776433
No 127
>KOG3742 consensus Glycogen synthase [Carbohydrate transport and metabolism]
Probab=97.86 E-value=2.8e-05 Score=85.15 Aligned_cols=108 Identities=23% Similarity=0.322 Sum_probs=71.4
Q ss_pred CChHHHHHHHHccCcEEEeCCCCCCCcHHHHHHHHcCCcEEEcCccccc----cccccC-ceEEEE-CC--CCHHHHHHH
Q 003962 628 VRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPA----EIIVNG-KSGYHI-DP--YHGEQAAEI 699 (783)
Q Consensus 628 ~~~~el~~~ia~aadvfV~PS~~E~fGltvlEAMa~GlPVVat~~GG~~----EiI~dg-~~G~li-~p--~d~e~lAea 699 (783)
++.+|..+ .+.+.|+||+||++|.|-.|.--+|.|-|+|+..|.. |.|++. .-|+.+ |- ..+++-.+.
T Consensus 492 lDYeeFVR----GCHLGVFPSYYEPWGYTPAECTVMGiPSvtTNlSGFGcfMeehi~d~~ayGIYIvDRRfks~deSv~q 567 (692)
T KOG3742|consen 492 LDYEEFVR----GCHLGVFPSYYEPWGYTPAECTVMGIPSVTTNLSGFGCFMEEHIEDPQAYGIYIVDRRFKSPDESVQQ 567 (692)
T ss_pred CCHHHHhc----cccccccccccCCCCCCchheEEeccccccccccchhhhHHHHhcCchhceEEEEecccCChhhHHHH
Confidence 34455555 6999999999999999999999999999999988864 444443 346544 31 245555555
Q ss_pred HHHHHHHhhCCHHHHHHHHHHHH-HHHHHhCCHHHHHHHHHH
Q 003962 700 LVDFFEKCKADPSYWDKISLGGL-KRIEEKYTWKIYSQRLLT 740 (783)
Q Consensus 700 I~~~l~~l~~dp~~~~~ms~~a~-~~v~~~ysw~~~a~~ll~ 740 (783)
+.+++... .....|+++.++.+ ++...-.+|+.+-.-|.+
T Consensus 568 L~~~m~~F-~~qsRRQRIiqRNrtErLSdLLDWk~lG~~Y~~ 608 (692)
T KOG3742|consen 568 LASFMYEF-CKQSRRQRIIQRNRTERLSDLLDWKYLGRYYRK 608 (692)
T ss_pred HHHHHHHH-HHHHHHHHHHHhcchhhHHHHHhHHHHhHHHHH
Confidence 55555322 24455666665544 344455778776555443
No 128
>COG0763 LpxB Lipid A disaccharide synthetase [Cell envelope biogenesis, outer membrane]
Probab=97.76 E-value=0.0026 Score=70.15 Aligned_cols=199 Identities=17% Similarity=0.151 Sum_probs=117.8
Q ss_pred CCCceEEEEcCCC-chHHHHHHHHhcC--CcEEEEecCCCccCCCCCchhhhhccccccccchhhHhHHhhhcCCEEEcC
Q 003962 381 QGKPDLIIGNYSD-GNIVASLLAHKLG--VTQCTIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITS 457 (783)
Q Consensus 381 ~~~pDIIh~h~~~-~~lva~llar~lg--vp~v~t~H~l~~~~~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt~ 457 (783)
..+||++++-+++ .|+-....-|+.| +|+|+.+- .+-+-|+.-. -....+..|++.+.
T Consensus 83 ~~kpD~~i~IDsPdFnl~vak~lrk~~p~i~iihYV~--------PsVWAWr~~R-----------a~~i~~~~D~lLai 143 (381)
T COG0763 83 ANKPDVLILIDSPDFNLRVAKKLRKAGPKIKIIHYVS--------PSVWAWRPKR-----------AVKIAKYVDHLLAI 143 (381)
T ss_pred hcCCCEEEEeCCCCCchHHHHHHHHhCCCCCeEEEEC--------cceeeechhh-----------HHHHHHHhhHeeee
Confidence 4689999975554 4664444445555 77665443 2344554331 12346788999998
Q ss_pred CHHHHhhccccccccccccccccccceeeeccCCCCCCcEEEecC-CccCCCCCCCchHHHhhccCchhhHHhhcChhhh
Q 003962 458 TFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSP-GADMSIYFPYTEEKRRLKSFHPEIEELLYSDVEN 536 (783)
Q Consensus 458 S~~~~~~~~~~v~qy~~~~~f~~p~l~~v~~gi~~~~~k~~VIpn-GvD~~~f~p~~~~~~r~~~~~~~~~~~l~~~~~~ 536 (783)
=+-+.+-+.+. |+ ..+.|.+ =+|.-.+.+... ..
T Consensus 144 lPFE~~~y~k~--------------------g~-----~~~yVGHpl~d~i~~~~~r~--------------------~a 178 (381)
T COG0763 144 LPFEPAFYDKF--------------------GL-----PCTYVGHPLADEIPLLPDRE--------------------AA 178 (381)
T ss_pred cCCCHHHHHhc--------------------CC-----CeEEeCChhhhhccccccHH--------------------HH
Confidence 87766522221 11 2344433 334332333322 23
Q ss_pred hhhhccccCCCCc-EEEEEec-ccC-CCCHHHHHHHHHHhHccCCCeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHHcC
Q 003962 537 KEHLCVLKDRNKP-ILFTMAR-LDR-VKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYK 613 (783)
Q Consensus 537 ~~~~gll~~~~k~-iIl~vGR-L~~-~Kgl~~LieA~~~l~~~~~~~~LvIVG~g~~~~~~~~ee~~~~~~l~~li~~~~ 613 (783)
++.+|+ +.+++ +.+..|+ -++ .+....+.+++..+++++|+.++++--.... .+.+.....+..
T Consensus 179 r~~l~~--~~~~~~lalLPGSR~sEI~rl~~~f~~a~~~l~~~~~~~~~vlp~~~~~-----------~~~~~~~~~~~~ 245 (381)
T COG0763 179 REKLGI--DADEKTLALLPGSRRSEIRRLLPPFVQAAQELKARYPDLKFVLPLVNAK-----------YRRIIEEALKWE 245 (381)
T ss_pred HHHhCC--CCCCCeEEEecCCcHHHHHHHHHHHHHHHHHHHhhCCCceEEEecCcHH-----------HHHHHHHHhhcc
Confidence 466777 54544 4566664 333 4678889999999999999999998876632 122222222222
Q ss_pred C-CCcEEEccCCCCcCChHHHHHHHHccCcEEEeCCCCCCCcHHHHHHHHcCCcEEEc
Q 003962 614 L-NGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFAT 670 (783)
Q Consensus 614 L-~~~V~flG~~~~~~~~~el~~~ia~aadvfV~PS~~E~fGltvlEAMa~GlPVVat 670 (783)
. ...+...+ ++-+..++. ||+.+.. .|.+.+|+|.+|+|.|++
T Consensus 246 ~~~~~~~~~~--------~~~~~a~~~-aD~al~a-----SGT~tLE~aL~g~P~Vv~ 289 (381)
T COG0763 246 VAGLSLILID--------GEKRKAFAA-ADAALAA-----SGTATLEAALAGTPMVVA 289 (381)
T ss_pred ccCceEEecC--------chHHHHHHH-hhHHHHh-----ccHHHHHHHHhCCCEEEE
Confidence 1 12233332 455667774 8877654 589999999999999997
No 129
>COG3914 Spy Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones]
Probab=97.64 E-value=0.0011 Score=75.61 Aligned_cols=181 Identities=14% Similarity=0.176 Sum_probs=125.9
Q ss_pred hhhhccccCCCCcEEEEEecccCCCCHHHHHHHHHHhHccCCCeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHHcCCC-
Q 003962 537 KEHLCVLKDRNKPILFTMARLDRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLN- 615 (783)
Q Consensus 537 ~~~~gll~~~~k~iIl~vGRL~~~Kgl~~LieA~~~l~~~~~~~~LvIVG~g~~~~~~~~ee~~~~~~l~~li~~~~L~- 615 (783)
|+..|+ +++..++++.++. .|-...+..-+.++.+.-|+..|++-|+|++. +....+++++++.|+.
T Consensus 421 R~~lgl--p~~avVf~c~~n~--~K~~pev~~~wmqIL~~vP~Svl~L~~~~~~~--------~~~~~l~~la~~~Gv~~ 488 (620)
T COG3914 421 RAQLGL--PEDAVVFCCFNNY--FKITPEVFALWMQILSAVPNSVLLLKAGGDDA--------EINARLRDLAEREGVDS 488 (620)
T ss_pred hhhcCC--CCCeEEEEecCCc--ccCCHHHHHHHHHHHHhCCCcEEEEecCCCcH--------HHHHHHHHHHHHcCCCh
Confidence 355788 5665555555554 45556666666666677899999999998652 4568899999999985
Q ss_pred CcEEEccCCCCcCChHHHHHHHHccCcEEEeCCCCCCCcHHHHHHHHcCCcEEEc-------Ccccccccccc-CceEEE
Q 003962 616 GQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFAT-------CKGGPAEIIVN-GKSGYH 687 (783)
Q Consensus 616 ~~V~flG~~~~~~~~~el~~~ia~aadvfV~PS~~E~fGltvlEAMa~GlPVVat-------~~GG~~EiI~d-g~~G~l 687 (783)
.+.+|.+ +.++++....+. .+|+++=+.-|-| +.|.+||+-+|+||++- ..|+ .++.. |..-++
T Consensus 489 eRL~f~p----~~~~~~h~a~~~-iADlvLDTyPY~g-~TTa~daLwm~vPVlT~~G~~FasR~~~--si~~~agi~e~v 560 (620)
T COG3914 489 ERLRFLP----PAPNEDHRARYG-IADLVLDTYPYGG-HTTASDALWMGVPVLTRVGEQFASRNGA--SIATNAGIPELV 560 (620)
T ss_pred hheeecC----CCCCHHHHHhhc-hhheeeecccCCC-ccchHHHHHhcCceeeeccHHHHHhhhH--HHHHhcCCchhh
Confidence 7999999 666677666666 5999987655433 46899999999999874 2332 23322 333344
Q ss_pred ECCCCHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHH--hCCHHHHHHHHHHHHH
Q 003962 688 IDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEE--KYTWKIYSQRLLTLTG 743 (783)
Q Consensus 688 i~p~d~e~lAeaI~~~l~~l~~dp~~~~~ms~~a~~~v~~--~ysw~~~a~~ll~ly~ 743 (783)
.+ +.++..++-..| -.|...+++.+..-.+.... -|+-+..++++.++|.
T Consensus 561 A~--s~~dYV~~av~~----g~dral~q~~r~~l~~~r~tspL~d~~~far~le~~y~ 612 (620)
T COG3914 561 AD--SRADYVEKAVAF----GSDRALRQQVRAELKRSRQTSPLFDPKAFARKLETLYW 612 (620)
T ss_pred cC--CHHHHHHHHHHh----cccHHHHHhhHHHHHhccccCcccCHHHHHHHHHHHHH
Confidence 44 556665555433 37887888877765555544 4899999999999975
No 130
>cd04300 GT1_Glycogen_Phosphorylase This is a family of oligosaccharide phosphorylases. It includes yeast and mammalian glycogen phosphorylases, plant starch/glucan phosphorylase, as well as the maltodextrin phosphorylases of bacteria. The members of this family catalyze the breakdown of oligosaccharides into glucose-1-phosphate units. They are important allosteric enzymes in carbohydrate metabolism. The allosteric control mechanisms of yeast and mammalian members of this family are different from that of bacterial members. The members of this family belong to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=97.59 E-value=0.0012 Score=79.54 Aligned_cols=152 Identities=15% Similarity=0.107 Sum_probs=110.8
Q ss_pred hhhccccCCCCcEEEEEecccCCCCHHH----HHHHHHHhHccC----CCeEEEEEeCCCCCCCccHHHHHHHHHHHHHH
Q 003962 538 EHLCVLKDRNKPILFTMARLDRVKNLTG----LVEWYGKNAKLR----ELVNLVVVGGDRRKESKDLEEQAEMKKMYSLI 609 (783)
Q Consensus 538 ~~~gll~~~~k~iIl~vGRL~~~Kgl~~----LieA~~~l~~~~----~~~~LvIVG~g~~~~~~~~ee~~~~~~l~~li 609 (783)
+..|+.-+++...++++-|+..+|...+ .++-+.++++.- ....+++.|...+. +...+..++.+..++
T Consensus 520 ~~~g~~ldp~slfdvq~KR~heYKRq~LNil~ii~~y~~i~~~p~~~~~P~~~IFaGKAaP~---y~~aK~iIklI~~va 596 (797)
T cd04300 520 KTTGVEVDPDSLFDVQVKRIHEYKRQLLNVLHIIHLYNRIKENPNADIVPRTFIFGGKAAPG---YYMAKLIIKLINAVA 596 (797)
T ss_pred HHhCCccCCCccEEEEeeechhhhhhhhHHHhhHHHHHHHHhCCCcCCCCeEEEEeccCCCC---cHHHHHHHHHHHHHH
Confidence 3446666888899999999999999888 445566665431 12667777765443 344455666666666
Q ss_pred HHc----CCCC--cEEEccCCCCcCChHHHHHHHHccCcEEEeCCC--CCCCcHHHHHHHHcCCcEEEcCcccccccccc
Q 003962 610 DQY----KLNG--QFRWISSQMNRVRNGELYRYICDTKGAFVQPAL--YEAFGLTVVEAMTCGLPTFATCKGGPAEIIVN 681 (783)
Q Consensus 610 ~~~----~L~~--~V~flG~~~~~~~~~el~~~ia~aadvfV~PS~--~E~fGltvlEAMa~GlPVVat~~GG~~EiI~d 681 (783)
+.. ...+ +|.|+. - .+=.+.+.+-.++|+-.+-|+ .|+.|..-+=+|.-|.++++|-.|...|+.++
T Consensus 597 ~~in~Dp~v~~~lkVVFle----n-Y~VslAe~iipaaDvseqis~ag~EASGTsnMK~~lNGaltlgtlDGanvEi~e~ 671 (797)
T cd04300 597 DVVNNDPDVGDKLKVVFLP----N-YNVSLAEKIIPAADLSEQISTAGKEASGTGNMKFMLNGALTIGTLDGANVEIAEE 671 (797)
T ss_pred HHhccChhcCCceEEEEeC----C-CChHHHHHhhhhhhhhhhCCCCCccccCCchhhHHhcCceeeecccchhHHHHHH
Confidence 632 2344 788986 2 233556666668999999877 89999999999999999999999999999987
Q ss_pred --CceEEEECCCCHHHHHH
Q 003962 682 --GKSGYHIDPYHGEQAAE 698 (783)
Q Consensus 682 --g~~G~li~p~d~e~lAe 698 (783)
++|+|+|-. +.++..+
T Consensus 672 vG~eN~fiFG~-~~~ev~~ 689 (797)
T cd04300 672 VGEENIFIFGL-TAEEVEA 689 (797)
T ss_pred hCcCcEEEeCC-CHHHHHH
Confidence 789999964 5555443
No 131
>COG4641 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=97.59 E-value=0.0052 Score=67.41 Aligned_cols=192 Identities=13% Similarity=0.069 Sum_probs=124.6
Q ss_pred CcEEEecCCccCCCCCCCchHHHhhccCchhhHHhhcChhhhhhhhccccCCCCcEEEEEecccCCCCHHHHHHHHHHhH
Q 003962 495 PKFNIVSPGADMSIYFPYTEEKRRLKSFHPEIEELLYSDVENKEHLCVLKDRNKPILFTMARLDRVKNLTGLVEWYGKNA 574 (783)
Q Consensus 495 ~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~~~~~l~~~~~~~~~~gll~~~~k~iIl~vGRL~~~Kgl~~LieA~~~l~ 574 (783)
.+...++.++|.+.|.|.+.... -.--+.++|.-.+. -++.+-+.+-.-.
T Consensus 161 ~~~~~~~~a~d~~~~~~i~~da~-----------------------------~~~dL~~ign~~pD-r~e~~ke~~~~ps 210 (373)
T COG4641 161 RNCYYLPWAVDDSLFHPIPPDAS-----------------------------YDVDLNLIGNPYPD-RVEEIKEFFVEPS 210 (373)
T ss_pred cceeccCccCCchhcccCCcccc-----------------------------ceeeeEEecCCCcc-HHHHHHHHhhccc
Confidence 35667899999999998864321 11246778876654 2222222221111
Q ss_pred c-cCCCeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHHcCCCCcEEEccCCCCcCCh-HHHHHHHHccCcEEEeCCC---
Q 003962 575 K-LRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRN-GELYRYICDTKGAFVQPAL--- 649 (783)
Q Consensus 575 ~-~~~~~~LvIVG~g~~~~~~~~ee~~~~~~l~~li~~~~L~~~V~flG~~~~~~~~-~el~~~ia~aadvfV~PS~--- 649 (783)
. +.-+-++.+.|..-.. . +....-.+++..+| +... ..+...+.- .++++.=++
T Consensus 211 ~kl~v~rr~~~~g~~y~~---------------~-~~~~~~~~~~~yIg----~~~~~~~v~~~~~~-~~~~~n~~r~~~ 269 (373)
T COG4641 211 FKLMVDRRFYVLGPRYPD---------------D-IWGRTWEPNVQYIG----YYNPKDGVPNAFKR-DDVTLNINRASI 269 (373)
T ss_pred hhhhccceeeecCCccch---------------h-hhcccccchhhhhh----ccCccchhhhcccc-cceeeeecHHHH
Confidence 1 1112355666655210 0 11111134566666 3333 555555553 666665433
Q ss_pred CCC---CcHHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHH
Q 003962 650 YEA---FGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIE 726 (783)
Q Consensus 650 ~E~---fGltvlEAMa~GlPVVat~~GG~~EiI~dg~~G~li~p~d~e~lAeaI~~~l~~l~~dp~~~~~ms~~a~~~v~ 726 (783)
-++ +.+.+.|+|+||.|.+++..-+..-.+.+|+.=++.. |..++.+++..++ ..++.++++.+.|.+++.
T Consensus 270 ~~~l~~~~~RvFeiagc~~~liT~~~~~~e~~f~pgk~~iv~~--d~kdl~~~~~yll----~h~~erkeiae~~ye~V~ 343 (373)
T COG4641 270 ANALFSPTNRVFEIAGCGGFLITDYWKDLEKFFKPGKDIIVYQ--DSKDLKEKLKYLL----NHPDERKEIAECAYERVL 343 (373)
T ss_pred HhhcCCchhhHHHHhhcCCccccccHHHHHHhcCCchheEEec--CHHHHHHHHHHHh----cCcchHHHHHHhhHHHHH
Confidence 233 3778999999999999999888988998887766665 8999999995554 899999999999999999
Q ss_pred HhCCHHHHHHHHHHHHH
Q 003962 727 EKYTWKIYSQRLLTLTG 743 (783)
Q Consensus 727 ~~ysw~~~a~~ll~ly~ 743 (783)
..||.+.-+.++++...
T Consensus 344 ~~ht~~~r~~~~~~~i~ 360 (373)
T COG4641 344 ARHTYEERIFKLLNEIA 360 (373)
T ss_pred HhccHHHHHHHHHHHHH
Confidence 99999988877766543
No 132
>COG0381 WecB UDP-N-acetylglucosamine 2-epimerase [Cell envelope biogenesis, outer membrane]
Probab=97.56 E-value=0.035 Score=61.55 Aligned_cols=274 Identities=16% Similarity=0.196 Sum_probs=165.2
Q ss_pred CCceEEEEcCCCc-hHHHHHHHHhcCCcEEEEecCCCccCCCCCchhhhhccccccccchhhHhHHhhhcCCEEEcCCHH
Q 003962 382 GKPDLIIGNYSDG-NIVASLLAHKLGVTQCTIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTFQ 460 (783)
Q Consensus 382 ~~pDIIh~h~~~~-~lva~llar~lgvp~v~t~H~l~~~~~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~ 460 (783)
.+||+|..|.-.. .++++++|...++|+...--++-. .+.+|..- + .....-.-||.-+++|..
T Consensus 91 ~kPD~VlVhGDT~t~lA~alaa~~~~IpV~HvEAGlRt-----~~~~~PEE---~-------NR~l~~~~S~~hfapte~ 155 (383)
T COG0381 91 EKPDLVLVHGDTNTTLAGALAAFYLKIPVGHVEAGLRT-----GDLYFPEE---I-------NRRLTSHLSDLHFAPTEI 155 (383)
T ss_pred hCCCEEEEeCCcchHHHHHHHHHHhCCceEEEeccccc-----CCCCCcHH---H-------HHHHHHHhhhhhcCChHH
Confidence 5799999887655 567789999999998876655421 11122110 0 011233466777888877
Q ss_pred HHhhccccccccccccccccccceeeeccCCCCCCcEEEecCCc-cCCCCCCCchHHHhhccCchhhHHhhcChhhhhhh
Q 003962 461 EIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGA-DMSIYFPYTEEKRRLKSFHPEIEELLYSDVENKEH 539 (783)
Q Consensus 461 ~~~~~~~~v~qy~~~~~f~~p~l~~v~~gi~~~~~k~~VIpnGv-D~~~f~p~~~~~~r~~~~~~~~~~~l~~~~~~~~~ 539 (783)
.++.+. .-|++ +.++.|+.|-+ |.-.+. ..+.. ........
T Consensus 156 ar~nLl--------------------~EG~~--~~~IfvtGnt~iDal~~~-----~~~~~-----------~~~~~~~~ 197 (383)
T COG0381 156 ARKNLL--------------------REGVP--EKRIFVTGNTVIDALLNT-----RDRVL-----------EDSKILAK 197 (383)
T ss_pred HHHHHH--------------------HcCCC--ccceEEeCChHHHHHHHH-----Hhhhc-----------cchhhHHh
Confidence 766322 22554 66788888744 211110 00000 00000111
Q ss_pred hccccCCC-CcEEEEEecccCC-CCHHHHHHHHHHhHccCCCeEEEEEeCCCCCCCccHHHHHHHHHHHHHH-HHcCCCC
Q 003962 540 LCVLKDRN-KPILFTMARLDRV-KNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLI-DQYKLNG 616 (783)
Q Consensus 540 ~gll~~~~-k~iIl~vGRL~~~-Kgl~~LieA~~~l~~~~~~~~LvIVG~g~~~~~~~~ee~~~~~~l~~li-~~~~L~~ 616 (783)
+ + .+.+ +.++++.=|-... +++..+++++.++.++++++.++.--... ..+++.. +.++-..
T Consensus 198 ~-~-~~~~~~~iLvT~HRreN~~~~~~~i~~al~~i~~~~~~~~viyp~H~~-------------~~v~e~~~~~L~~~~ 262 (383)
T COG0381 198 G-L-DDKDKKYILVTAHRRENVGEPLEEICEALREIAEEYPDVIVIYPVHPR-------------PRVRELVLKRLKNVE 262 (383)
T ss_pred h-h-ccccCcEEEEEcchhhcccccHHHHHHHHHHHHHhCCCceEEEeCCCC-------------hhhhHHHHHHhCCCC
Confidence 1 1 1333 4455555565543 99999999999999988777665543321 2233333 4556666
Q ss_pred cEEEccCCCCcCChHHHHHHHHccCcEEEeCCCCCCCcHHHHHHHHcCCcEEEcC-ccccccccccCceEEEECCCCHHH
Q 003962 617 QFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATC-KGGPAEIIVNGKSGYHIDPYHGEQ 695 (783)
Q Consensus 617 ~V~flG~~~~~~~~~el~~~ia~aadvfV~PS~~E~fGltvlEAMa~GlPVVat~-~GG~~EiI~dg~~G~li~p~d~e~ 695 (783)
+|.++. ++...+...++.. | .++++ ..|-..=||-..|+||++-+ .-.-+|-++.| .-.++. .|.+.
T Consensus 263 ~v~li~----pl~~~~f~~L~~~-a-~~ilt----DSGgiqEEAp~lg~Pvl~lR~~TERPE~v~ag-t~~lvg-~~~~~ 330 (383)
T COG0381 263 RVKLID----PLGYLDFHNLMKN-A-FLILT----DSGGIQEEAPSLGKPVLVLRDTTERPEGVEAG-TNILVG-TDEEN 330 (383)
T ss_pred cEEEeC----CcchHHHHHHHHh-c-eEEEe----cCCchhhhHHhcCCcEEeeccCCCCccceecC-ceEEeC-ccHHH
Confidence 799997 7788888888886 5 33333 23556789999999999974 34556766555 344554 47788
Q ss_pred HHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Q 003962 696 AAEILVDFFEKCKADPSYWDKISLGGLKRIEEKYTWKIYSQRLLTLTGV 744 (783)
Q Consensus 696 lAeaI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~~~a~~ll~ly~~ 744 (783)
+.+++..++ +|++..++|+... ..|.=...++++.++...
T Consensus 331 i~~~~~~ll----~~~~~~~~m~~~~-----npYgdg~as~rIv~~l~~ 370 (383)
T COG0381 331 ILDAATELL----EDEEFYERMSNAK-----NPYGDGNASERIVEILLN 370 (383)
T ss_pred HHHHHHHHh----hChHHHHHHhccc-----CCCcCcchHHHHHHHHHH
Confidence 888885544 8988888876633 456656666666665544
No 133
>COG0058 GlgP Glucan phosphorylase [Carbohydrate transport and metabolism]
Probab=97.37 E-value=0.004 Score=74.19 Aligned_cols=143 Identities=17% Similarity=0.153 Sum_probs=111.1
Q ss_pred hccccCCCCcEEEEEecccCCCCHHHHH----HHHHHhH-ccCCCeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHHcCC
Q 003962 540 LCVLKDRNKPILFTMARLDRVKNLTGLV----EWYGKNA-KLRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKL 614 (783)
Q Consensus 540 ~gll~~~~k~iIl~vGRL~~~Kgl~~Li----eA~~~l~-~~~~~~~LvIVG~g~~~~~~~~ee~~~~~~l~~li~~~~L 614 (783)
.|+..+++...++++-|+.++|...+.+ ..+..++ ...|.+.+++.|...+ .+......++.+...++..+.
T Consensus 479 ~gi~~~p~~lfd~~~kRiheYKRq~Lnl~~i~~ly~~i~~d~~prv~~iFaGKAhP---~y~~aK~iIk~I~~~a~~in~ 555 (750)
T COG0058 479 TGIEVDPNALFDGQARRIHEYKRQLLNLLDIERLYRILKEDWVPRVQIIFAGKAHP---ADYAAKEIIKLINDVADVINN 555 (750)
T ss_pred cCCccCCCcceeeeehhhhhhhhhHHhHhhHHHHHHHHhcCCCCceEEEEeccCCC---cchHHHHHHHHHHHHHHhhcc
Confidence 3555578888999999999999877665 3444444 3345566677776554 245556777788888888777
Q ss_pred CCcEEEccCCCCcCChHHHHHHHHccCcEEEeCCC--CCCCcHHHHHHHHcCCcEEEcCccccccccc--cCceEEEECC
Q 003962 615 NGQFRWISSQMNRVRNGELYRYICDTKGAFVQPAL--YEAFGLTVVEAMTCGLPTFATCKGGPAEIIV--NGKSGYHIDP 690 (783)
Q Consensus 615 ~~~V~flG~~~~~~~~~el~~~ia~aadvfV~PS~--~E~fGltvlEAMa~GlPVVat~~GG~~EiI~--dg~~G~li~p 690 (783)
..+|.|+. - .+-.+.+.|-.++||-.+.|+ .|+.|..-+-||.-|.++++|-.|...|+.+ ++.|||+|-.
T Consensus 556 ~lkVvFl~----n-YdvslA~~iipa~Dvweqis~a~~EASGTsnMK~alNGaltigtlDGanvEi~e~vg~~N~~~fG~ 630 (750)
T COG0058 556 KLKVVFLP----N-YDVSLAELLIPAADVWEQIPTAGKEASGTSNMKAALNGALTLGTLDGANVEIYEHVGGENGWIFGE 630 (750)
T ss_pred cceEEEeC----C-CChhHHHhhcccccccccCCCCCccccCcCcchHHhcCCceeeccccHHHHHHHhcCCCceEEeCC
Confidence 78899996 2 334566666668999999876 8999999999999999999999999999997 8999999964
No 134
>PRK10017 colanic acid biosynthesis protein; Provisional
Probab=97.36 E-value=0.13 Score=58.84 Aligned_cols=139 Identities=11% Similarity=0.097 Sum_probs=74.6
Q ss_pred HHHHHHHHHhHccCCCeEEEEEeCC--CCCCCccHHHHHHHHHHHHHHHHcCCCCcEEEccCCCCcCChHHHHHHHHccC
Q 003962 564 TGLVEWYGKNAKLRELVNLVVVGGD--RRKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTK 641 (783)
Q Consensus 564 ~~LieA~~~l~~~~~~~~LvIVG~g--~~~~~~~~ee~~~~~~l~~li~~~~L~~~V~flG~~~~~~~~~el~~~ia~aa 641 (783)
..+.+++..+.+. +++++++-.. .+.... ......+++.+.+.-..+++.+. +..+..|+..+++. +
T Consensus 260 ~~la~~i~~Li~~--g~~Vv~lp~~~~~~~~~~-----dD~~~~~~l~~~~~~~~~~~vi~---~~~~~~e~~~iIs~-~ 328 (426)
T PRK10017 260 KAFAGVVNRIIDE--GYQVIALSTCTGIDSYNK-----DDRMVALNLRQHVSDPARYHVVM---DELNDLEMGKILGA-C 328 (426)
T ss_pred HHHHHHHHHHHHC--CCeEEEEecccCccCCCC-----chHHHHHHHHHhcccccceeEec---CCCChHHHHHHHhh-C
Confidence 3455666666543 4555555432 111000 11122334444444334455443 13345688889986 9
Q ss_pred cEEEeCCCCCCCcHHHHHHHHcCCcEEEcCc----cccccccccCceEEEEC--CCCHHHHHHHHHHHHHHhhCCHHHHH
Q 003962 642 GAFVQPALYEAFGLTVVEAMTCGLPTFATCK----GGPAEIIVNGKSGYHID--PYHGEQAAEILVDFFEKCKADPSYWD 715 (783)
Q Consensus 642 dvfV~PS~~E~fGltvlEAMa~GlPVVat~~----GG~~EiI~dg~~G~li~--p~d~e~lAeaI~~~l~~l~~dp~~~~ 715 (783)
|++|-.-+. +++=|++.|+|+|+-.. -|..+-+ |...+.++ .-+.+++.+++.+++ +|.+.++
T Consensus 329 dl~ig~RlH-----a~I~a~~~gvP~i~i~Y~~K~~~~~~~l--g~~~~~~~~~~l~~~~Li~~v~~~~----~~r~~~~ 397 (426)
T PRK10017 329 ELTVGTRLH-----SAIISMNFGTPAIAINYEHKSAGIMQQL--GLPEMAIDIRHLLDGSLQAMVADTL----GQLPALN 397 (426)
T ss_pred CEEEEecch-----HHHHHHHcCCCEEEeeehHHHHHHHHHc--CCccEEechhhCCHHHHHHHHHHHH----hCHHHHH
Confidence 998865443 57889999999999643 2333333 22334444 335667777775554 7766544
Q ss_pred HHHHHHHHH
Q 003962 716 KISLGGLKR 724 (783)
Q Consensus 716 ~ms~~a~~~ 724 (783)
+.-+.+.+.
T Consensus 398 ~~l~~~v~~ 406 (426)
T PRK10017 398 ARLAEAVSR 406 (426)
T ss_pred HHHHHHHHH
Confidence 433333333
No 135
>PRK14986 glycogen phosphorylase; Provisional
Probab=97.33 E-value=0.0027 Score=76.41 Aligned_cols=153 Identities=13% Similarity=0.120 Sum_probs=113.6
Q ss_pred hhhccccCCCCcEEEEEecccCCCCHHH-HHHH---HHHhHccC----CCeEEEEEeCCCCCCCccHHHHHHHHHHHHHH
Q 003962 538 EHLCVLKDRNKPILFTMARLDRVKNLTG-LVEW---YGKNAKLR----ELVNLVVVGGDRRKESKDLEEQAEMKKMYSLI 609 (783)
Q Consensus 538 ~~~gll~~~~k~iIl~vGRL~~~Kgl~~-LieA---~~~l~~~~----~~~~LvIVG~g~~~~~~~~ee~~~~~~l~~li 609 (783)
++.|..-+++...++++-|+..+|...+ ++.. +.++++.- ....+++.|...+. +...+..++.+..++
T Consensus 533 ~~~g~~ldp~sLfd~qakR~heYKRq~LNil~~i~ry~~i~~~p~~~~~P~~~IFaGKAaP~---y~~aK~iIk~I~~va 609 (815)
T PRK14986 533 QQLNVVVNPKALFDVQIKRIHEYKRQLMNVLHVITRYNRIKADPDAKWVPRVNIFAGKAASA---YYMAKHIIHLINDVA 609 (815)
T ss_pred HHhCCccCcccceeeeehhhhhhhhhhHHHhhhHHHHHHHHhCCCcCCCCeEEEEeecCCCC---cHHHHHHHHHHHHHH
Confidence 3447666888889999999999999888 5544 55555431 23677777766543 455566777777777
Q ss_pred H----HcCCCC--cEEEccCCCCcCChHHHHHHHHccCcEEEeCCC--CCCCcHHHHHHHHcCCcEEEcCcccccccccc
Q 003962 610 D----QYKLNG--QFRWISSQMNRVRNGELYRYICDTKGAFVQPAL--YEAFGLTVVEAMTCGLPTFATCKGGPAEIIVN 681 (783)
Q Consensus 610 ~----~~~L~~--~V~flG~~~~~~~~~el~~~ia~aadvfV~PS~--~E~fGltvlEAMa~GlPVVat~~GG~~EiI~d 681 (783)
+ +-.+.+ +|.|+. - ..=.+.+.+-.++|+-.+-|+ .|+.|..-+=+|.-|.+.++|-.|...|+.++
T Consensus 610 ~~in~Dp~v~~~lkVVFle----n-Y~vslAe~lipg~Dv~eqis~ag~EASGTsnMK~alNGaLtlgtlDG~nvEi~e~ 684 (815)
T PRK14986 610 KVINNDPQIGDKLKVVFIP----N-YSVSLAQLIIPAADLSEQISLAGTEASGTSNMKFALNGALTIGTLDGANVEMLEH 684 (815)
T ss_pred HHhccChhhcCceeEEEeC----C-CCHHHHHHhhhhhhhhhhCCCCCccccCcchhhHHhcCceeeeccCCchhHHHHh
Confidence 7 223345 799996 2 334566666668999999877 89999999999999999999999999999986
Q ss_pred --CceEEEECCCCHHHHHHH
Q 003962 682 --GKSGYHIDPYHGEQAAEI 699 (783)
Q Consensus 682 --g~~G~li~p~d~e~lAea 699 (783)
++|||.|-. +.++.++.
T Consensus 685 vG~eN~~~fG~-~~~ev~~~ 703 (815)
T PRK14986 685 VGEENIFIFGN-TAEEVEAL 703 (815)
T ss_pred cCCCcEEEeCC-CHHHHHHH
Confidence 889999964 56665543
No 136
>PRK01021 lpxB lipid-A-disaccharide synthase; Reviewed
Probab=97.30 E-value=0.038 Score=64.91 Aligned_cols=243 Identities=16% Similarity=0.136 Sum_probs=131.3
Q ss_pred CCceEEEE-cCCCchHHHHHHHHhcCC--cEEEEecCCCccCCCCCchhhhhccccccccchhhHhHHhhhcCCEEEcCC
Q 003962 382 GKPDLIIG-NYSDGNIVASLLAHKLGV--TQCTIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITST 458 (783)
Q Consensus 382 ~~pDIIh~-h~~~~~lva~llar~lgv--p~v~t~H~l~~~~~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt~S 458 (783)
.+||++++ .+++.|+-.+..+++.|+ |+++-+- .+-+.|+.- + -+..-+..|.++|.=
T Consensus 309 ~kPD~vIlID~PgFNlrLAK~lkk~Gi~ipviyYVs--------PqVWAWR~~--R---------ikki~k~vD~ll~If 369 (608)
T PRK01021 309 TNPRTVICIDFPDFHFLLIKKLRKRGYKGKIVHYVC--------PSIWAWRPK--R---------KTILEKYLDLLLLIL 369 (608)
T ss_pred cCCCEEEEeCCCCCCHHHHHHHHhcCCCCCEEEEEC--------ccceeeCcc--h---------HHHHHHHhhhheecC
Confidence 58999997 455558755556677785 8765432 223344322 1 112345778888888
Q ss_pred HHHHhhccccccccccccccccccceeeeccCCCCCCcEEEecC-CccCCCCCCCchHHHhhccCchhhHHhhcChhhhh
Q 003962 459 FQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSP-GADMSIYFPYTEEKRRLKSFHPEIEELLYSDVENK 537 (783)
Q Consensus 459 ~~~~~~~~~~v~qy~~~~~f~~p~l~~v~~gi~~~~~k~~VIpn-GvD~~~f~p~~~~~~r~~~~~~~~~~~l~~~~~~~ 537 (783)
+-|.+- |+ .+|+ +...|.+ =+|.-...+.. .+.+
T Consensus 370 PFE~~~-------------------y~-~~gv-----~v~yVGHPL~d~i~~~~~~--------------------~~~r 404 (608)
T PRK01021 370 PFEQNL-------------------FK-DSPL-----RTVYLGHPLVETISSFSPN--------------------LSWK 404 (608)
T ss_pred ccCHHH-------------------HH-hcCC-----CeEEECCcHHhhcccCCCH--------------------HHHH
Confidence 766552 11 1233 3445543 33432111111 1224
Q ss_pred hhhccccCCCCcE-EEEEe-cccC-CCCHHHHHHHHH--HhHccCCCeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHHc
Q 003962 538 EHLCVLKDRNKPI-LFTMA-RLDR-VKNLTGLVEWYG--KNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQY 612 (783)
Q Consensus 538 ~~~gll~~~~k~i-Il~vG-RL~~-~Kgl~~LieA~~--~l~~~~~~~~LvIVG~g~~~~~~~~ee~~~~~~l~~li~~~ 612 (783)
+++|+ ++++++ .+..| |-.+ .+.+..+++++. .+. ++.++++..... ...+.+++.++..
T Consensus 405 ~~lgl--~~~~~iIaLLPGSR~~EI~rllPv~l~aa~~~~l~---~~l~fvvp~a~~----------~~~~~i~~~~~~~ 469 (608)
T PRK01021 405 EQLHL--PSDKPIVAAFPGSRRGDILRNLTIQVQAFLASSLA---STHQLLVSSANP----------KYDHLILEVLQQE 469 (608)
T ss_pred HHcCC--CCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHhc---cCeEEEEecCch----------hhHHHHHHHHhhc
Confidence 55777 545554 45666 3434 467788888887 443 357777753321 1123344444332
Q ss_pred CCCCcEEEccCCCCcCChHHHHHHHHccCcEEEeCCCCCCCcHHHHHHHHcCCcEEEc-Ccc------------------
Q 003962 613 KLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFAT-CKG------------------ 673 (783)
Q Consensus 613 ~L~~~V~flG~~~~~~~~~el~~~ia~aadvfV~PS~~E~fGltvlEAMa~GlPVVat-~~G------------------ 673 (783)
+. -.+..+. ..+-+.+++ +||+.+.. .|.+.+|++.+|+|.|+. ..+
T Consensus 470 ~~-~~~~ii~-------~~~~~~~m~-aaD~aLaa-----SGTaTLEaAL~g~PmVV~YK~s~Lty~Iak~Lvki~i~yI 535 (608)
T PRK01021 470 GC-LHSHIVP-------SQFRYELMR-ECDCALAK-----CGTIVLETALNQTPTIVTCQLRPFDTFLAKYIFKIILPAY 535 (608)
T ss_pred CC-CCeEEec-------CcchHHHHH-hcCeeeec-----CCHHHHHHHHhCCCEEEEEecCHHHHHHHHHHHhccCCee
Confidence 21 1234432 012367777 49988876 589999999999999985 222
Q ss_pred ccccccccCc--eEEE--ECCCCHHHHHHHHHHHHHHhhCCHHHHHHHHHHHH
Q 003962 674 GPAEIIVNGK--SGYH--IDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGL 722 (783)
Q Consensus 674 G~~EiI~dg~--~G~l--i~p~d~e~lAeaI~~~l~~l~~dp~~~~~ms~~a~ 722 (783)
+.+.++.+.. --++ =+.-+++.+++++ +++ .|++.++++.+.-.
T Consensus 536 sLpNIIagr~VvPEllqgQ~~~tpe~La~~l-~lL----~d~~~r~~~~~~l~ 583 (608)
T PRK01021 536 SLPNIILGSTIFPEFIGGKKDFQPEEVAAAL-DIL----KTSQSKEKQKDACR 583 (608)
T ss_pred ehhHHhcCCCcchhhcCCcccCCHHHHHHHH-HHh----cCHHHHHHHHHHHH
Confidence 1122222111 1122 0234688888875 544 78877766655443
No 137
>PRK14985 maltodextrin phosphorylase; Provisional
Probab=97.27 E-value=0.0022 Score=76.92 Aligned_cols=149 Identities=11% Similarity=0.021 Sum_probs=107.3
Q ss_pred hhhccccCCCCcEEEEEecccCCCCHHH-HHHH---HHHhHccC----CCeEEEEEeCCCCCCCccHHHHHHHHHHHHHH
Q 003962 538 EHLCVLKDRNKPILFTMARLDRVKNLTG-LVEW---YGKNAKLR----ELVNLVVVGGDRRKESKDLEEQAEMKKMYSLI 609 (783)
Q Consensus 538 ~~~gll~~~~k~iIl~vGRL~~~Kgl~~-LieA---~~~l~~~~----~~~~LvIVG~g~~~~~~~~ee~~~~~~l~~li 609 (783)
++.|..-+++...++++-|+..+|...+ ++.. +.++++.- ....+++.|...+. +...+..++.+..++
T Consensus 519 ~~~g~~ldp~slfdvq~kR~heYKRq~Lnil~ii~~y~~i~~~p~~~~~P~~~IFaGKAaP~---y~~aK~iIklI~~va 595 (798)
T PRK14985 519 QRTGIEINPQAIFDVQIKRLHEYKRQHLNLLHILALYKEIRENPQADRVPRVFLFGAKAAPG---YYLAKNIIFAINKVA 595 (798)
T ss_pred HHhCCccCchhcchhhHhhhhhhhhhhhHhhhhHHHHHHHHhCCCcCCCCeEEEEeecCCCC---cHHHHHHHHHHHHHH
Confidence 3446666788888999999999998888 5544 44554420 12677777776543 344455566666666
Q ss_pred HHcC----CCC--cEEEccCCCCcCChHHHHHHHHccCcEEEeCCC--CCCCcHHHHHHHHcCCcEEEcCcccccccccc
Q 003962 610 DQYK----LNG--QFRWISSQMNRVRNGELYRYICDTKGAFVQPAL--YEAFGLTVVEAMTCGLPTFATCKGGPAEIIVN 681 (783)
Q Consensus 610 ~~~~----L~~--~V~flG~~~~~~~~~el~~~ia~aadvfV~PS~--~E~fGltvlEAMa~GlPVVat~~GG~~EiI~d 681 (783)
+..+ ..+ +|.|+. - .+=.+.+.+-.++|+-.+-|+ .|+.|..-+=+|.-|.++++|-.|...|+.++
T Consensus 596 ~~in~Dp~v~~~lkVVFle----n-Y~VslAe~lipaaDvseqis~ag~EASGTsnMK~amNGaLtlgtlDGanvEi~e~ 670 (798)
T PRK14985 596 EVINNDPLVGDKLKVVFLP----D-YCVSAAELLIPAADISEQISTAGKEASGTGNMKLALNGALTVGTLDGANVEIAEQ 670 (798)
T ss_pred HHhcCChhhCCceeEEEeC----C-CChHHHHHHhhhhhhhhhCCCCCccccCcchhHHHhcCceeeecccchHHHHHHH
Confidence 4442 234 789986 2 234556666668999999876 89999999999999999999999999999876
Q ss_pred --CceEEEECCCCHHH
Q 003962 682 --GKSGYHIDPYHGEQ 695 (783)
Q Consensus 682 --g~~G~li~p~d~e~ 695 (783)
++|||.|-. +.++
T Consensus 671 vG~eN~f~fG~-~~~e 685 (798)
T PRK14985 671 VGEENIFIFGH-TVEQ 685 (798)
T ss_pred hCcCcEEEeCC-CHHH
Confidence 789999954 3443
No 138
>PLN03007 UDP-glucosyltransferase family protein
Probab=97.23 E-value=0.7 Score=53.84 Aligned_cols=78 Identities=12% Similarity=0.168 Sum_probs=46.8
Q ss_pred CCcEEEccCCCCcCChHHHHHHHHccCc--EEEeCCCCCCCcHHHHHHHHcCCcEEEcCccc----ccccccc-CceEEE
Q 003962 615 NGQFRWISSQMNRVRNGELYRYICDTKG--AFVQPALYEAFGLTVVEAMTCGLPTFATCKGG----PAEIIVN-GKSGYH 687 (783)
Q Consensus 615 ~~~V~flG~~~~~~~~~el~~~ia~aad--vfV~PS~~E~fGltvlEAMa~GlPVVat~~GG----~~EiI~d-g~~G~l 687 (783)
..+++..+ +++..++.. .++ +||.= =| -++++||+++|+|+|+-...+ .+..+.+ -..|+-
T Consensus 344 ~~g~~v~~----w~PQ~~iL~----h~~v~~fvtH---~G-~nS~~Eal~~GVP~v~~P~~~DQ~~na~~~~~~~~~G~~ 411 (482)
T PLN03007 344 GKGLIIRG----WAPQVLILD----HQATGGFVTH---CG-WNSLLEGVAAGLPMVTWPVGAEQFYNEKLVTQVLRTGVS 411 (482)
T ss_pred cCCEEEec----CCCHHHHhc----cCccceeeec---Cc-chHHHHHHHcCCCeeeccchhhhhhhHHHHHHhhcceeE
Confidence 35677777 666766655 343 46642 22 348999999999999974432 3322221 123433
Q ss_pred E--------C--CCCHHHHHHHHHHHH
Q 003962 688 I--------D--PYHGEQAAEILVDFF 704 (783)
Q Consensus 688 i--------~--p~d~e~lAeaI~~~l 704 (783)
+ + .-+.+++++++.+++
T Consensus 412 ~~~~~~~~~~~~~~~~~~l~~av~~~m 438 (482)
T PLN03007 412 VGAKKLVKVKGDFISREKVEKAVREVI 438 (482)
T ss_pred eccccccccccCcccHHHHHHHHHHHh
Confidence 2 1 126788888887666
No 139
>TIGR02093 P_ylase glycogen/starch/alpha-glucan phosphorylases. This family consists of phosphorylases. Members use phosphate to break alpha 1,4 linkages between pairs of glucose residues at the end of long glucose polymers, releasing alpha-D-glucose 1-phosphate. The nomenclature convention is to preface the name according to the natural substrate, as in glycogen phosphorylase, starch phosphorylase, maltodextrin phosphorylase, etc. Name differences among these substrates reflect differences in patterns of branching with alpha 1,6 linkages. Members include allosterically regulated and unregulated forms. A related family, TIGR02094, contains examples known to act well on particularly small alpha 1,4 glucans, as may be found after import from exogenous sources.
Probab=97.20 E-value=0.0044 Score=74.43 Aligned_cols=151 Identities=18% Similarity=0.106 Sum_probs=107.8
Q ss_pred hhhccccCCCCcEEEEEecccCCCCHHH-HH---HHHHHhHccC----CCeEEEEEeCCCCCCCccHHHHHHHHHHHHHH
Q 003962 538 EHLCVLKDRNKPILFTMARLDRVKNLTG-LV---EWYGKNAKLR----ELVNLVVVGGDRRKESKDLEEQAEMKKMYSLI 609 (783)
Q Consensus 538 ~~~gll~~~~k~iIl~vGRL~~~Kgl~~-Li---eA~~~l~~~~----~~~~LvIVG~g~~~~~~~~ee~~~~~~l~~li 609 (783)
++.|..-+++...++++-|+..+|...+ ++ +.+.++++.- ....+++.|...+. +...+..++.+..++
T Consensus 517 ~~~g~~ldp~slfdvq~KR~heYKRq~LNil~ii~~y~~i~~~p~~~~~P~~~IFaGKAaP~---y~~aK~iIklI~~va 593 (794)
T TIGR02093 517 EHTGVEVDPNSIFDVQVKRLHEYKRQLLNVLHVIYLYNRIKEDPPKDIVPRTVIFGGKAAPG---YHMAKLIIKLINSVA 593 (794)
T ss_pred HhcCCccCccccchhhheechhhhHHHHHHhhhHHHHHHHHhCCCcCCCCeEEEEEecCCCC---cHHHHHHHHHHHHHH
Confidence 3456666888888999999999999888 44 4455554421 13567777765543 344445566666666
Q ss_pred HHc----CCCC--cEEEccCCCCcCChHHHHHHHHccCcEEEeCCC--CCCCcHHHHHHHHcCCcEEEcCcccccccccc
Q 003962 610 DQY----KLNG--QFRWISSQMNRVRNGELYRYICDTKGAFVQPAL--YEAFGLTVVEAMTCGLPTFATCKGGPAEIIVN 681 (783)
Q Consensus 610 ~~~----~L~~--~V~flG~~~~~~~~~el~~~ia~aadvfV~PS~--~E~fGltvlEAMa~GlPVVat~~GG~~EiI~d 681 (783)
+.. ...+ +|.|+. - .+=.+.+.+-.++|+-.+-|+ .|+.|..-+=+|.-|.++++|-.|...|+.++
T Consensus 594 ~~iN~Dp~v~~~lkVVFle----n-Y~VslAe~iipaaDvseqistag~EASGTsnMK~alNGaltlgtlDGanvEi~e~ 668 (794)
T TIGR02093 594 EVVNNDPAVGDKLKVVFVP----N-YNVSLAELIIPAADLSEQISTAGKEASGTGNMKFMLNGALTIGTLDGANVEIREE 668 (794)
T ss_pred HHhccChhhCCceeEEEeC----C-CChHHHHHhhhhhhhhhhCCCCCccccCcchhHHHhcCcceeecccchhHHHHHH
Confidence 432 2334 789986 2 233455666668999999877 89999999999999999999999999999987
Q ss_pred --CceEEEECCCCHHHHH
Q 003962 682 --GKSGYHIDPYHGEQAA 697 (783)
Q Consensus 682 --g~~G~li~p~d~e~lA 697 (783)
++|+|+|-. +.++..
T Consensus 669 vG~eN~fiFG~-~~~ev~ 685 (794)
T TIGR02093 669 VGAENIFIFGL-TVEEVE 685 (794)
T ss_pred hCcccEEEcCC-CHHHHH
Confidence 789999953 444443
No 140
>PF12000 Glyco_trans_4_3: Gkycosyl transferase family 4 group; InterPro: IPR022623 This presumed domain is functionally uncharacterised and found in bacteria. This region is about 170 amino acids in length and is found N-terminal to PF00534 from PFAM. There is a single completely conserved residue G that may be functionally important.
Probab=97.10 E-value=0.0046 Score=61.59 Aligned_cols=110 Identities=18% Similarity=0.242 Sum_probs=61.6
Q ss_pred HHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHhc-CCcEEEEecCCCccCCCCCchhh-----hhccccccccchhhHh
Q 003962 371 DVAVEIAKELQGKPDLIIGNYSDGNIVASLLAHKL-GVTQCTIAHALEKTKYPDSDIYW-----KNLDDKYHFSCQFTAD 444 (783)
Q Consensus 371 ~~~~~l~~~l~~~pDIIh~h~~~~~lva~llar~l-gvp~v~t~H~l~~~~~~~s~~~~-----~~~~~~y~f~~~~~~e 444 (783)
.++..|++. +..||||++|...| .+..++..+ ++|++.-+--+.... .++..+ .......+...+-+..
T Consensus 55 ~a~~~L~~~-Gf~PDvI~~H~GWG--e~Lflkdv~P~a~li~Y~E~~y~~~--g~d~~FDpe~p~~~~~~~~~r~rN~~~ 129 (171)
T PF12000_consen 55 RAARQLRAQ-GFVPDVIIAHPGWG--ETLFLKDVFPDAPLIGYFEFYYRAS--GADVGFDPEFPPSLDDRARLRMRNAHN 129 (171)
T ss_pred HHHHHHHHc-CCCCCEEEEcCCcc--hhhhHHHhCCCCcEEEEEEEEecCC--CCcCCCCCCCCCCHHHHHHHHHHhHHH
Confidence 444555554 67899999998766 333455555 778664211100000 011111 0111112222222345
Q ss_pred HHhhhcCCEEEcCCHHHHhhccccccccccccccccccceeeeccCCCCCCcEEEecCCccCCCC
Q 003962 445 LIAMNHTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIY 509 (783)
Q Consensus 445 ~~a~~~AD~IIt~S~~~~~~~~~~v~qy~~~~~f~~p~l~~v~~gi~~~~~k~~VIpnGvD~~~f 509 (783)
...+..||..|+.|.-.+..+.. .+.+|+.||+-|||++.+
T Consensus 130 l~~l~~~D~~isPT~wQ~~~fP~------------------------~~r~kI~VihdGiDt~~~ 170 (171)
T PF12000_consen 130 LLALEQADAGISPTRWQRSQFPA------------------------EFRSKISVIHDGIDTDRF 170 (171)
T ss_pred HHHHHhCCcCcCCCHHHHHhCCH------------------------HHHcCcEEeecccchhhc
Confidence 66888999999999766552221 125799999999999765
No 141
>PLN02208 glycosyltransferase family protein
Probab=97.02 E-value=1 Score=51.88 Aligned_cols=153 Identities=9% Similarity=0.021 Sum_probs=78.3
Q ss_pred CCcEEEEEecccCCCCHHHHHHHHHHh-HccCCCeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHHcCCCCcEEEccCCC
Q 003962 547 NKPILFTMARLDRVKNLTGLVEWYGKN-AKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQM 625 (783)
Q Consensus 547 ~k~iIl~vGRL~~~Kgl~~LieA~~~l-~~~~~~~~LvIVG~g~~~~~~~~ee~~~~~~l~~li~~~~L~~~V~flG~~~ 625 (783)
+..+.++.|.+.. -.-..+.|.+..+ ....| . ++++-.+.+.. +..+ ..-+.+.+.++ ..++.+.+
T Consensus 251 ~sVvyvSfGS~~~-l~~~q~~e~~~~l~~s~~p-f-~wv~r~~~~~~--~~~~-~lp~~f~~r~~----~~g~~v~~--- 317 (442)
T PLN02208 251 KSVVFCSLGSQII-LEKDQFQELCLGMELTGLP-F-LIAVKPPRGSS--TVQE-GLPEGFEERVK----GRGVVWGG--- 317 (442)
T ss_pred CcEEEEecccccc-CCHHHHHHHHHHHHhCCCc-E-EEEEeCCCccc--chhh-hCCHHHHHHHh----cCCcEeec---
Confidence 4567788888763 2445566655554 22233 3 34443211100 0000 00011222222 23566666
Q ss_pred CcCChHHHHHHHHccCcEEEeCCCCCCCcHHHHHHHHcCCcEEEcCc----ccccccccc-CceEEEECC-----CCHHH
Q 003962 626 NRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCK----GGPAEIIVN-GKSGYHIDP-----YHGEQ 695 (783)
Q Consensus 626 ~~~~~~el~~~ia~aadvfV~PS~~E~fGltvlEAMa~GlPVVat~~----GG~~EiI~d-g~~G~li~p-----~d~e~ 695 (783)
+++..++... .+.++||. - +=-++++||+++|+|+|+-.. ...+..+.+ -..|..++. -+.++
T Consensus 318 -W~PQ~~iL~H--~~v~~Fvt--H--cG~nS~~Eai~~GVP~l~~P~~~DQ~~na~~~~~~~g~gv~~~~~~~~~~~~~~ 390 (442)
T PLN02208 318 -WVQQPLILDH--PSIGCFVN--H--CGPGTIWESLVSDCQMVLIPFLSDQVLFTRLMTEEFEVSVEVSREKTGWFSKES 390 (442)
T ss_pred -cCCHHHHhcC--CccCeEEc--c--CCchHHHHHHHcCCCEEecCcchhhHHHHHHHHHHhceeEEeccccCCcCcHHH
Confidence 6666666552 11234442 1 122489999999999999643 334444433 356777753 26788
Q ss_pred HHHHHHHHHHHhhCCH-HHHHHHHHHHHH
Q 003962 696 AAEILVDFFEKCKADP-SYWDKISLGGLK 723 (783)
Q Consensus 696 lAeaI~~~l~~l~~dp-~~~~~ms~~a~~ 723 (783)
++++|.+++ .++ +..+++.+++.+
T Consensus 391 l~~ai~~~m----~~~~e~g~~~r~~~~~ 415 (442)
T PLN02208 391 LSNAIKSVM----DKDSDLGKLVRSNHTK 415 (442)
T ss_pred HHHHHHHHh----cCCchhHHHHHHHHHH
Confidence 888887766 554 334455554443
No 142
>PLN02562 UDP-glycosyltransferase
Probab=96.96 E-value=1.2 Score=51.53 Aligned_cols=88 Identities=17% Similarity=0.161 Sum_probs=58.1
Q ss_pred CCcEEEccCCCCcCChHHHHHHHHccCcEEEeCCCCCCCcHHHHHHHHcCCcEEEcC----ccccccccccC-ceEEEEC
Q 003962 615 NGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATC----KGGPAEIIVNG-KSGYHID 689 (783)
Q Consensus 615 ~~~V~flG~~~~~~~~~el~~~ia~aadvfV~PS~~E~fGltvlEAMa~GlPVVat~----~GG~~EiI~dg-~~G~li~ 689 (783)
.+++...+ +++..++... . +.++||.= =| -.+++||+.+|+|+|+.. ....+..+.+. ..|+-+.
T Consensus 327 ~~~~~v~~----w~PQ~~iL~h-~-~v~~fvtH---~G-~nS~~Eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~~~ 396 (448)
T PLN02562 327 SKQGKVVS----WAPQLEVLKH-Q-AVGCYLTH---CG-WNSTMEAIQCQKRLLCYPVAGDQFVNCAYIVDVWKIGVRIS 396 (448)
T ss_pred ccCEEEEe----cCCHHHHhCC-C-ccceEEec---Cc-chhHHHHHHcCCCEEeCCcccchHHHHHHHHHHhCceeEeC
Confidence 35777777 7777777662 1 13355542 22 348999999999999863 34445555442 4677775
Q ss_pred CCCHHHHHHHHHHHHHHhhCCHHHHHH
Q 003962 690 PYHGEQAAEILVDFFEKCKADPSYWDK 716 (783)
Q Consensus 690 p~d~e~lAeaI~~~l~~l~~dp~~~~~ 716 (783)
.-+.+++++++.+++ .|++++++
T Consensus 397 ~~~~~~l~~~v~~~l----~~~~~r~~ 419 (448)
T PLN02562 397 GFGQKEVEEGLRKVM----EDSGMGER 419 (448)
T ss_pred CCCHHHHHHHHHHHh----CCHHHHHH
Confidence 567889999997766 67765544
No 143
>PLN02554 UDP-glycosyltransferase family protein
Probab=96.78 E-value=1.7 Score=50.70 Aligned_cols=88 Identities=16% Similarity=0.064 Sum_probs=52.4
Q ss_pred CcEEEccCCCCcCChHHHHHHHHccCcEEEeCCCCCCCcHHHHHHHHcCCcEEEcCcc----ccc-cccccCceEEEECC
Q 003962 616 GQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKG----GPA-EIIVNGKSGYHIDP 690 (783)
Q Consensus 616 ~~V~flG~~~~~~~~~el~~~ia~aadvfV~PS~~E~fGltvlEAMa~GlPVVat~~G----G~~-EiI~dg~~G~li~p 690 (783)
+++.+.+ +++..++... . +.++||.= =| -++++||+.+|+|+|+-... ..+ .+++.-+.|..++.
T Consensus 342 ~~g~v~~----W~PQ~~iL~H-~-~v~~FvtH---~G-~nS~~Ea~~~GVP~l~~P~~~DQ~~Na~~~v~~~g~Gv~l~~ 411 (481)
T PLN02554 342 DIGKVIG----WAPQVAVLAK-P-AIGGFVTH---CG-WNSILESLWFGVPMAAWPLYAEQKFNAFEMVEELGLAVEIRK 411 (481)
T ss_pred cCceEEe----eCCHHHHhCC-c-ccCccccc---Cc-cchHHHHHHcCCCEEecCccccchhhHHHHHHHhCceEEeec
Confidence 4566666 6777776631 1 34455531 22 24899999999999997443 333 33444345766531
Q ss_pred -------------CCHHHHHHHHHHHHHHhhCCHHHHHH
Q 003962 691 -------------YHGEQAAEILVDFFEKCKADPSYWDK 716 (783)
Q Consensus 691 -------------~d~e~lAeaI~~~l~~l~~dp~~~~~ 716 (783)
-+.++++++|.+++. .|++++++
T Consensus 412 ~~~~~~~~~~~~~~~~e~l~~av~~vm~---~~~~~r~~ 447 (481)
T PLN02554 412 YWRGDLLAGEMETVTAEEIERGIRCLME---QDSDVRKR 447 (481)
T ss_pred cccccccccccCeEcHHHHHHHHHHHhc---CCHHHHHH
Confidence 267788888876662 25554444
No 144
>PLN00414 glycosyltransferase family protein
Probab=96.71 E-value=1.8 Score=50.05 Aligned_cols=93 Identities=9% Similarity=0.042 Sum_probs=57.3
Q ss_pred EEEccCCCCcCChHHHHHHHHccCcEEEeCCCCCCCcHHHHHHHHcCCcEEEcCc----cccccccc-cCceEEEECC--
Q 003962 618 FRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCK----GGPAEIIV-NGKSGYHIDP-- 690 (783)
Q Consensus 618 V~flG~~~~~~~~~el~~~ia~aadvfV~PS~~E~fGltvlEAMa~GlPVVat~~----GG~~EiI~-dg~~G~li~p-- 690 (783)
..+.| +++..++... . +.++||.= +=-++++||+++|+|+|+-.. .-.+..+. .-..|..+..
T Consensus 314 ~vv~~----w~PQ~~vL~h-~-~v~~fvtH----~G~nS~~Ea~~~GvP~l~~P~~~dQ~~na~~~~~~~g~g~~~~~~~ 383 (446)
T PLN00414 314 IVWEG----WVEQPLILSH-P-SVGCFVNH----CGFGSMWESLVSDCQIVFIPQLADQVLITRLLTEELEVSVKVQRED 383 (446)
T ss_pred eEEec----cCCHHHHhcC-C-ccceEEec----CchhHHHHHHHcCCCEEecCcccchHHHHHHHHHHhCeEEEecccc
Confidence 44455 6677777652 1 23557652 223589999999999999743 33444553 3457777742
Q ss_pred ---CCHHHHHHHHHHHHHHhhCCH-HHHHHHHHHHHHH
Q 003962 691 ---YHGEQAAEILVDFFEKCKADP-SYWDKISLGGLKR 724 (783)
Q Consensus 691 ---~d~e~lAeaI~~~l~~l~~dp-~~~~~ms~~a~~~ 724 (783)
-+.+++++++.+++ .++ +..+++.+++++.
T Consensus 384 ~~~~~~~~i~~~v~~~m----~~~~e~g~~~r~~a~~~ 417 (446)
T PLN00414 384 SGWFSKESLRDTVKSVM----DKDSEIGNLVKRNHKKL 417 (446)
T ss_pred CCccCHHHHHHHHHHHh----cCChhhHHHHHHHHHHH
Confidence 36788888887766 554 4455555555543
No 145
>PLN02173 UDP-glucosyl transferase family protein
Probab=96.68 E-value=1.9 Score=49.86 Aligned_cols=79 Identities=14% Similarity=0.135 Sum_probs=51.0
Q ss_pred CcEEEccCCCCcCChHHHHHHHHccCcEEEeCCCCCCCcHHHHHHHHcCCcEEEcC----ccccccccccC-ceEEEECC
Q 003962 616 GQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATC----KGGPAEIIVNG-KSGYHIDP 690 (783)
Q Consensus 616 ~~V~flG~~~~~~~~~el~~~ia~aadvfV~PS~~E~fGltvlEAMa~GlPVVat~----~GG~~EiI~dg-~~G~li~p 690 (783)
+++.+.+ +++..++... .+.++||.= +=.++++||+++|+|+|+-. ..-.+..+.+. ..|+-+..
T Consensus 317 ~~~~i~~----W~PQ~~iL~H--~~v~~FvtH----cGwnS~~Eai~~GVP~l~~P~~~DQ~~Na~~v~~~~g~Gv~v~~ 386 (449)
T PLN02173 317 DKSLVLK----WSPQLQVLSN--KAIGCFMTH----CGWNSTMEGLSLGVPMVAMPQWTDQPMNAKYIQDVWKVGVRVKA 386 (449)
T ss_pred CceEEeC----CCCHHHHhCC--CccceEEec----CccchHHHHHHcCCCEEecCchhcchHHHHHHHHHhCceEEEee
Confidence 5678777 7777676652 112355532 22468999999999999974 33344455553 46666532
Q ss_pred ------CCHHHHHHHHHHHH
Q 003962 691 ------YHGEQAAEILVDFF 704 (783)
Q Consensus 691 ------~d~e~lAeaI~~~l 704 (783)
-+.+++++++.+++
T Consensus 387 ~~~~~~~~~e~v~~av~~vm 406 (449)
T PLN02173 387 EKESGIAKREEIEFSIKEVM 406 (449)
T ss_pred cccCCcccHHHHHHHHHHHh
Confidence 15788999997776
No 146
>PRK02797 4-alpha-L-fucosyltransferase; Provisional
Probab=96.60 E-value=0.39 Score=52.06 Aligned_cols=170 Identities=11% Similarity=0.011 Sum_probs=115.9
Q ss_pred CCcEEEEEecc-cCCCCHHHHHHHHHHhHccCCCeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHHcCCCCcEEEccCCC
Q 003962 547 NKPILFTMARL-DRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQM 625 (783)
Q Consensus 547 ~k~iIl~vGRL-~~~Kgl~~LieA~~~l~~~~~~~~LvIVG~g~~~~~~~~ee~~~~~~l~~li~~~~L~~~V~flG~~~ 625 (783)
+.++.+-+|+- ++..+...+++++.+... .++++++.=+-|.. ..++++++.+..+++--.+++..+-
T Consensus 144 ~~~~tIlvGNSgd~SN~Hie~L~~l~~~~~--~~v~ii~PlsYp~g------n~~Yi~~V~~~~~~lF~~~~~~~L~--- 212 (322)
T PRK02797 144 AGKMTILVGNSGDRSNRHIEALRALHQQFG--DNVKIIVPMGYPAN------NQAYIEEVRQAGLALFGAENFQILT--- 212 (322)
T ss_pred CCceEEEEeCCCCCcccHHHHHHHHHHHhC--CCeEEEEECCcCCC------CHHHHHHHHHHHHHhcCcccEEehh---
Confidence 34566677765 577888888888876643 67887776554321 1268888888888876557888886
Q ss_pred CcCChHHHHHHHHccCcEEEeCC-CCCCCcHHHHHHHHcCCcEEEc-CccccccccccCceEEEECCCCHHHHHHHHHHH
Q 003962 626 NRVRNGELYRYICDTKGAFVQPA-LYEAFGLTVVEAMTCGLPTFAT-CKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDF 703 (783)
Q Consensus 626 ~~~~~~el~~~ia~aadvfV~PS-~~E~fGltvlEAMa~GlPVVat-~~GG~~EiI~dg~~G~li~p~d~e~lAeaI~~~ 703 (783)
+.++.+|..++++. +|+.++-- +-+|.| +++=.+..|+||+.+ +..-..++.+.|..- +++..+. -..+.+
T Consensus 213 e~l~f~eYl~lL~~-~Dl~~f~~~RQQgiG-nl~lLi~~G~~v~l~r~n~fwqdl~e~gv~V-lf~~d~L---~~~~v~- 285 (322)
T PRK02797 213 EKLPFDDYLALLRQ-CDLGYFIFARQQGIG-TLCLLIQLGKPVVLSRDNPFWQDLTEQGLPV-LFTGDDL---DEDIVR- 285 (322)
T ss_pred hhCCHHHHHHHHHh-CCEEEEeechhhHHh-HHHHHHHCCCcEEEecCCchHHHHHhCCCeE-EecCCcc---cHHHHH-
Confidence 57888999999996 99999865 478888 566689999999998 556667776666443 3443322 111211
Q ss_pred HHHhhCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Q 003962 704 FEKCKADPSYWDKISLGGLKRIEEKYTWKIYSQRLLTLTGV 744 (783)
Q Consensus 704 l~~l~~dp~~~~~ms~~a~~~v~~~ysw~~~a~~ll~ly~~ 744 (783)
+..++|...-++.+. |+-+.+++.|.+++..
T Consensus 286 --------e~~rql~~~dk~~I~--Ff~pn~~~~W~~~l~~ 316 (322)
T PRK02797 286 --------EAQRQLASVDKNIIA--FFSPNYLQGWRNALAI 316 (322)
T ss_pred --------HHHHHHHhhCcceee--ecCHhHHHHHHHHHHH
Confidence 112334444555553 9999999999888754
No 147
>PLN02670 transferase, transferring glycosyl groups
Probab=96.50 E-value=2.5 Score=49.17 Aligned_cols=112 Identities=15% Similarity=0.111 Sum_probs=66.3
Q ss_pred EEEccCCCCcCChHHHHHHHHccCcEEEeCCCCCCCcHHHHHHHHcCCcEEEcC----ccccccccccCceEEEECC---
Q 003962 618 FRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATC----KGGPAEIIVNGKSGYHIDP--- 690 (783)
Q Consensus 618 V~flG~~~~~~~~~el~~~ia~aadvfV~PS~~E~fGltvlEAMa~GlPVVat~----~GG~~EiI~dg~~G~li~p--- 690 (783)
+.+.+ +++..++... . +.++||.= +=-++++||+++|+|+|+-. ....+..+..-+.|..++.
T Consensus 341 ~vv~~----W~PQ~~IL~H-~-~v~~FvtH----cGwnS~~Eai~~GVP~l~~P~~~DQ~~Na~~v~~~g~Gv~l~~~~~ 410 (472)
T PLN02670 341 MIHVG----WVPQVKILSH-E-SVGGFLTH----CGWNSVVEGLGFGRVLILFPVLNEQGLNTRLLHGKKLGLEVPRDER 410 (472)
T ss_pred eEEeC----cCCHHHHhcC-c-ccceeeec----CCcchHHHHHHcCCCEEeCcchhccHHHHHHHHHcCeeEEeecccc
Confidence 55556 6666666552 1 13335531 22358999999999999974 3334445555567887753
Q ss_pred ---CCHHHHHHHHHHHHHHhhCCH---HHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Q 003962 691 ---YHGEQAAEILVDFFEKCKADP---SYWDKISLGGLKRIEEKYTWKIYSQRLLTLTGV 744 (783)
Q Consensus 691 ---~d~e~lAeaI~~~l~~l~~dp---~~~~~ms~~a~~~v~~~ysw~~~a~~ll~ly~~ 744 (783)
-+.++++++|.+++ .|+ +++++. +...+.+.+.=+-..+++.+++....
T Consensus 411 ~~~~~~e~i~~av~~vm----~~~~g~~~r~~a-~~l~~~~~~~~~~~~~~~~~~~~l~~ 465 (472)
T PLN02670 411 DGSFTSDSVAESVRLAM----VDDAGEEIRDKA-KEMRNLFGDMDRNNRYVDELVHYLRE 465 (472)
T ss_pred CCcCcHHHHHHHHHHHh----cCcchHHHHHHH-HHHHHHHhCcchhHHHHHHHHHHHHH
Confidence 25788888887766 554 333332 22233344555666777777665543
No 148
>PLN02863 UDP-glucoronosyl/UDP-glucosyl transferase family protein
Probab=96.49 E-value=2.5 Score=49.17 Aligned_cols=118 Identities=14% Similarity=0.119 Sum_probs=65.9
Q ss_pred CcEEEccCCCCcCChHHHHHHHHccCcEEEeCCCCCCCcHHHHHHHHcCCcEEEcCc----ccccccccc-CceEEEECC
Q 003962 616 GQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCK----GGPAEIIVN-GKSGYHIDP 690 (783)
Q Consensus 616 ~~V~flG~~~~~~~~~el~~~ia~aadvfV~PS~~E~fGltvlEAMa~GlPVVat~~----GG~~EiI~d-g~~G~li~p 690 (783)
.+++..+ +++..++... .+.++||.= =| -.+++||+++|+|+|+-.. .-.+..+.+ -+.|.-+..
T Consensus 343 ~g~~v~~----w~PQ~~vL~h--~~v~~fvtH---~G-~nS~~Eal~~GvP~l~~P~~~DQ~~na~~v~~~~gvG~~~~~ 412 (477)
T PLN02863 343 RGLVIRG----WAPQVAILSH--RAVGAFLTH---CG-WNSVLEGLVAGVPMLAWPMAADQFVNASLLVDELKVAVRVCE 412 (477)
T ss_pred CCEEecC----CCCHHHHhcC--CCcCeEEec---CC-chHHHHHHHcCCCEEeCCccccchhhHHHHHHhhceeEEecc
Confidence 4577777 6666666552 125566652 22 3489999999999999643 333444433 256776622
Q ss_pred -----CCHHHHHHHHHHHHHHhhCCHHHHHH---HHHHHHHHHHHhCCHHHHHHHHHHHHHHhc
Q 003962 691 -----YHGEQAAEILVDFFEKCKADPSYWDK---ISLGGLKRIEEKYTWKIYSQRLLTLTGVYG 746 (783)
Q Consensus 691 -----~d~e~lAeaI~~~l~~l~~dp~~~~~---ms~~a~~~v~~~ysw~~~a~~ll~ly~~~~ 746 (783)
-+.+++++++.+++. ++++++++ +++.+++.+.+.=+-.+..+++.+-+..+|
T Consensus 413 ~~~~~~~~~~v~~~v~~~m~---~~~~~r~~a~~l~e~a~~Av~~gGSS~~~l~~~v~~i~~~~ 473 (477)
T PLN02863 413 GADTVPDSDELARVFMESVS---ENQVERERAKELRRAALDAIKERGSSVKDLDGFVKHVVELG 473 (477)
T ss_pred CCCCCcCHHHHHHHHHHHhh---ccHHHHHHHHHHHHHHHHHhccCCcHHHHHHHHHHHHHHhc
Confidence 257788888877652 34443332 333333333333334444455555444444
No 149
>PRK14089 ipid-A-disaccharide synthase; Provisional
Probab=96.29 E-value=0.066 Score=59.52 Aligned_cols=91 Identities=15% Similarity=0.046 Sum_probs=57.3
Q ss_pred CcEEEEEeccc--CCCCHHHHHHHHHHhHccCCCeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHHcCCCCcEEEccCCC
Q 003962 548 KPILFTMARLD--RVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQM 625 (783)
Q Consensus 548 k~iIl~vGRL~--~~Kgl~~LieA~~~l~~~~~~~~LvIVG~g~~~~~~~~ee~~~~~~l~~li~~~~L~~~V~flG~~~ 625 (783)
+.+.++.|+-. -.+.+..+++++.++.+.. ..+++.|.... +.+++...+. ..+.+.+
T Consensus 168 ~~I~llPGSR~~Ei~~llP~~~~aa~~L~~~~--~~~~i~~a~~~------------~~i~~~~~~~---~~~~~~~--- 227 (347)
T PRK14089 168 GTIAFMPGSRKSEIKRLMPIFKELAKKLEGKE--KILVVPSFFKG------------KDLKEIYGDI---SEFEISY--- 227 (347)
T ss_pred CEEEEECCCCHHHHHHHHHHHHHHHHHHhhcC--cEEEEeCCCcH------------HHHHHHHhcC---CCcEEec---
Confidence 34455666532 2366777889999988653 56777665421 2333333322 2344543
Q ss_pred CcCChHHHHHHHHccCcEEEeCCCCCCCcHHHHHHHHcCCcEEEc
Q 003962 626 NRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFAT 670 (783)
Q Consensus 626 ~~~~~~el~~~ia~aadvfV~PS~~E~fGltvlEAMa~GlPVVat 670 (783)
+.+.+++ +||+.+.. .|.+.+|++.+|+|.|..
T Consensus 228 ------~~~~~m~-~aDlal~~-----SGT~TLE~al~g~P~Vv~ 260 (347)
T PRK14089 228 ------DTHKALL-EAEFAFIC-----SGTATLEAALIGTPFVLA 260 (347)
T ss_pred ------cHHHHHH-hhhHHHhc-----CcHHHHHHHHhCCCEEEE
Confidence 2456677 48888765 488888999999999986
No 150
>PF08288 PIGA: PIGA (GPI anchor biosynthesis); InterPro: IPR013234 This domain is found on phosphatidylinositol N-acetylglucosaminyltransferase proteins. These proteins are involved in GPI anchor biosynthesis and are associated with the disease paroxysmal nocturnal haemoglobinuria [].; GO: 0006506 GPI anchor biosynthetic process
Probab=96.15 E-value=0.027 Score=49.33 Aligned_cols=72 Identities=18% Similarity=0.137 Sum_probs=49.6
Q ss_pred ccCeEEEEeccCCCccccccccccccchhhHHHHHHHHHHHHHHHcCCCceEEEEcCCCc--hHHHHHHHHhcCCcEEEE
Q 003962 335 TKYSDILRVPFRTEKGVVRKWISRFEVWPYLETYTEDVAVEIAKELQGKPDLIIGNYSDG--NIVASLLAHKLGVTQCTI 412 (783)
Q Consensus 335 ~~~v~Ilrvp~~~~~~~~~~~isr~~i~~~l~~f~~~~~~~l~~~l~~~pDIIh~h~~~~--~lva~llar~lgvp~v~t 412 (783)
+.+.++..+|+... ......|.+-.... ..+.+.. +++.||||+|.+.+ +.-+.+.|+.+|++.|+|
T Consensus 13 tngLKVYYlP~~~~--------~~~~t~Pt~~~~~p-l~R~Ili--rE~I~IVHgH~a~S~l~hE~i~hA~~mGlktVfT 81 (90)
T PF08288_consen 13 TNGLKVYYLPLKVF--------YNQCTLPTLFGSFP-LLRNILI--RERIDIVHGHQAFSTLCHEAILHARTMGLKTVFT 81 (90)
T ss_pred CCCeEEEeecchhh--------hcCcchHHHHHhhH-HHHHHHH--HcCeeEEEeehhhhHHHHHHHHHHHhCCCcEEee
Confidence 45789999998753 22334444433332 2333332 35799999999876 457888899999999999
Q ss_pred ecCCC
Q 003962 413 AHALE 417 (783)
Q Consensus 413 ~H~l~ 417 (783)
-|++.
T Consensus 82 DHSLf 86 (90)
T PF08288_consen 82 DHSLF 86 (90)
T ss_pred ccccc
Confidence 99873
No 151
>PLN02410 UDP-glucoronosyl/UDP-glucosyl transferase family protein
Probab=96.07 E-value=4 Score=47.23 Aligned_cols=92 Identities=11% Similarity=0.153 Sum_probs=56.9
Q ss_pred CcEEEccCCCCcCChHHHHHHHHccCcEEEeCCCCCCCcHHHHHHHHcCCcEEEcC----ccccccccccC-ceEEEEC-
Q 003962 616 GQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATC----KGGPAEIIVNG-KSGYHID- 689 (783)
Q Consensus 616 ~~V~flG~~~~~~~~~el~~~ia~aadvfV~PS~~E~fGltvlEAMa~GlPVVat~----~GG~~EiI~dg-~~G~li~- 689 (783)
++....+ +++..++... . +.++||.= =|+ ++++||+++|+|+|+-. ....+..+.+. +.|+.+.
T Consensus 324 ~~g~v~~----w~PQ~~iL~h-~-~v~~fvtH---~G~-nS~~Ea~~~GvP~l~~P~~~DQ~~na~~~~~~~~~G~~~~~ 393 (451)
T PLN02410 324 GRGYIVK----WAPQKEVLSH-P-AVGGFWSH---CGW-NSTLESIGEGVPMICKPFSSDQKVNARYLECVWKIGIQVEG 393 (451)
T ss_pred CCeEEEc----cCCHHHHhCC-C-ccCeeeec---Cch-hHHHHHHHcCCCEEeccccccCHHHHHHHHHHhCeeEEeCC
Confidence 5666666 7777777662 1 24446642 223 48999999999999964 33344444443 5777663
Q ss_pred CCCHHHHHHHHHHHHHHhhCCHHHHHHHHHHHH
Q 003962 690 PYHGEQAAEILVDFFEKCKADPSYWDKISLGGL 722 (783)
Q Consensus 690 p~d~e~lAeaI~~~l~~l~~dp~~~~~ms~~a~ 722 (783)
.-+.+++++++.+++ .|++ .+++.++++
T Consensus 394 ~~~~~~v~~av~~lm----~~~~-~~~~r~~a~ 421 (451)
T PLN02410 394 DLDRGAVERAVKRLM----VEEE-GEEMRKRAI 421 (451)
T ss_pred cccHHHHHHHHHHHH----cCCc-HHHHHHHHH
Confidence 346788999997766 5553 334444443
No 152
>PLN02210 UDP-glucosyl transferase
Probab=96.04 E-value=4.1 Score=47.15 Aligned_cols=131 Identities=10% Similarity=0.120 Sum_probs=71.6
Q ss_pred CCcEEEEEecccCCCCHHHHHHHHHHhHccCCCeEEEE-EeCCCCCCCccHHHHHHHHHHHHHHHHcCCCCcEEEccCCC
Q 003962 547 NKPILFTMARLDRVKNLTGLVEWYGKNAKLRELVNLVV-VGGDRRKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQM 625 (783)
Q Consensus 547 ~k~iIl~vGRL~~~Kgl~~LieA~~~l~~~~~~~~LvI-VG~g~~~~~~~~ee~~~~~~l~~li~~~~L~~~V~flG~~~ 625 (783)
...+.++.|.+... .-+.+-+++..+... +.++++ ++..... .+ ...+.+... .++....+
T Consensus 269 ~svvyvsfGS~~~~-~~~~~~e~a~~l~~~--~~~flw~~~~~~~~--~~------~~~~~~~~~----~~~g~v~~--- 330 (456)
T PLN02210 269 SSVVYISFGSMLES-LENQVETIAKALKNR--GVPFLWVIRPKEKA--QN------VQVLQEMVK----EGQGVVLE--- 330 (456)
T ss_pred CceEEEEecccccC-CHHHHHHHHHHHHhC--CCCEEEEEeCCccc--cc------hhhHHhhcc----CCCeEEEe---
Confidence 34678888887542 334444555444443 235444 4422110 00 111222211 13334455
Q ss_pred CcCChHHHHHHHHccC--cEEEeCCCCCCCcHHHHHHHHcCCcEEEcCc----ccccccccc-CceEEEECC------CC
Q 003962 626 NRVRNGELYRYICDTK--GAFVQPALYEAFGLTVVEAMTCGLPTFATCK----GGPAEIIVN-GKSGYHIDP------YH 692 (783)
Q Consensus 626 ~~~~~~el~~~ia~aa--dvfV~PS~~E~fGltvlEAMa~GlPVVat~~----GG~~EiI~d-g~~G~li~p------~d 692 (783)
+++..++.. + + ++||.= =|+ ++++||+.+|+|+|+-.. .-.+..+.+ -+.|..+.. -+
T Consensus 331 -w~PQ~~iL~---h-~~vg~FitH---~G~-nS~~Eai~~GVP~v~~P~~~DQ~~na~~~~~~~g~G~~l~~~~~~~~~~ 401 (456)
T PLN02210 331 -WSPQEKILS---H-MAISCFVTH---CGW-NSTIETVVAGVPVVAYPSWTDQPIDARLLVDVFGIGVRMRNDAVDGELK 401 (456)
T ss_pred -cCCHHHHhc---C-cCcCeEEee---CCc-ccHHHHHHcCCCEEecccccccHHHHHHHHHHhCeEEEEeccccCCcCC
Confidence 667777655 2 4 366642 222 389999999999999644 334445554 357877642 36
Q ss_pred HHHHHHHHHHHH
Q 003962 693 GEQAAEILVDFF 704 (783)
Q Consensus 693 ~e~lAeaI~~~l 704 (783)
.+++++++.+++
T Consensus 402 ~~~l~~av~~~m 413 (456)
T PLN02210 402 VEEVERCIEAVT 413 (456)
T ss_pred HHHHHHHHHHHh
Confidence 788889997766
No 153
>PLN02992 coniferyl-alcohol glucosyltransferase
Probab=95.96 E-value=4.3 Score=47.28 Aligned_cols=79 Identities=14% Similarity=0.071 Sum_probs=50.3
Q ss_pred CcEEEccCCCCcCChHHHHHHHHccCcEEEeCCCCCCCcHHHHHHHHcCCcEEEcCcc----cccccc-ccCceEEEECC
Q 003962 616 GQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKG----GPAEII-VNGKSGYHIDP 690 (783)
Q Consensus 616 ~~V~flG~~~~~~~~~el~~~ia~aadvfV~PS~~E~fGltvlEAMa~GlPVVat~~G----G~~EiI-~dg~~G~li~p 690 (783)
..+.+.+ +++..++...- +.+.||.= +=-++++||+.+|+|+|+-... ..+..+ +.-+.|..++.
T Consensus 338 rg~vv~~----W~PQ~~iL~h~--~vg~FitH----~G~nS~~Eal~~GVP~l~~P~~~DQ~~na~~~~~~~g~gv~~~~ 407 (481)
T PLN02992 338 RGFVVPS----WAPQAEILAHQ--AVGGFLTH----CGWSSTLESVVGGVPMIAWPLFAEQNMNAALLSDELGIAVRSDD 407 (481)
T ss_pred CCEEEee----cCCHHHHhCCc--ccCeeEec----CchhHHHHHHHcCCCEEecCccchhHHHHHHHHHHhCeeEEecC
Confidence 3577777 66777766521 12235532 2235899999999999997443 344454 24446777743
Q ss_pred ----CCHHHHHHHHHHHH
Q 003962 691 ----YHGEQAAEILVDFF 704 (783)
Q Consensus 691 ----~d~e~lAeaI~~~l 704 (783)
-+.++++++|.+++
T Consensus 408 ~~~~~~~~~l~~av~~vm 425 (481)
T PLN02992 408 PKEVISRSKIEALVRKVM 425 (481)
T ss_pred CCCcccHHHHHHHHHHHh
Confidence 36788888887776
No 154
>PF00343 Phosphorylase: Carbohydrate phosphorylase; InterPro: IPR000811 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 35 GT35 from CAZY comprises enzymes with only one known activity; glycogen and starch phosphorylase (2.4.1.1 from EC). The main role of glycogen phosphorylase (GPase) is to provide phosphorylated glucose molecules (G-1-P) []. GPase is a highly regulated allosteric enzyme. The net effect of the regulatory site allows the enzyme to operate at a variety of rates; the enzyme is not simply regulated as "on" or "off", but rather it can be thought of being set to operate at an ideal rate based on changing conditions at in the cell. The most important allosteric effector is the phosphate molecule covalently attached to Ser14. This switches GPase from the b (inactive) state to the a (active) state. Upon phosphorylation, GPase attains about 80% of its Vmax. When the enzyme is not phosphorylated, GPase activity is practically non-existent at low AMP levels. There is some apparent controversy as to the structure of GPase. All sources agree that the enzyme is multimeric, but there is apparent controversy as to the enzyme being a tetramer or a dimer. Apparently, GPase (in the a form) forms tetramers in the crystal form. The consensus seems to be that `regardless of the a or b form, GPase functions as a dimer in vivo []. The GPase monomer is best described as consisting of two domains, an N-terminal domain and a C-terminal domain []. The C-terminal domain is often referred to as the catalytic domain. It consists of a beta-sheet core surrounded by layers of helical segments []. The vitamin cofactor pyridoxal phosphate (PLP) is covalently attached to the amino acid backbone. The N-terminal domain also consists of a central beta-sheet core and is surrounded by layers of helical segments. The N-terminal domain contains different allosteric effector sites to regulate the enzyme. Bacterial phosphorylases follow the same catalytic mechanisms as their plant and animal counterparts, but differ considerably in terms of their substrate specificity and regulation. The catalytic domains are highly conserved while the regulatory sites are only poorly conserved. For maltodextrin phosphorylase from Escherichia coli the physiological role of the enzyme in the utilisation of maltidextrins is known in detail; that of all the other bacterial phosphorylases is still unclear. Roles in regulatuon of endogenous glycogen metabolism in periods of starvation, and sporulation, stress response or quick adaptation to changing environments are possible [].; GO: 0004645 phosphorylase activity, 0005975 carbohydrate metabolic process; PDB: 1YGP_B 2AW3_B 2AV6_B 1AHP_B 1QM5_A 1L5W_A 2ECP_A 2ASV_A 1L5V_B 1E4O_B ....
Probab=95.96 E-value=0.14 Score=61.28 Aligned_cols=151 Identities=13% Similarity=0.119 Sum_probs=96.9
Q ss_pred hhhccccCCCCcEEEEEecccCCCCHHHH----HHHHHHhHcc----CCCeEEEEEeCCCCCCCccHHHHHHHHHHHHHH
Q 003962 538 EHLCVLKDRNKPILFTMARLDRVKNLTGL----VEWYGKNAKL----RELVNLVVVGGDRRKESKDLEEQAEMKKMYSLI 609 (783)
Q Consensus 538 ~~~gll~~~~k~iIl~vGRL~~~Kgl~~L----ieA~~~l~~~----~~~~~LvIVG~g~~~~~~~~ee~~~~~~l~~li 609 (783)
+..|..-+++...++++-|+..+|...+. ++-+.++++. ...+.+++.|...+. |...+..++.+.+++
T Consensus 434 ~~~~~~ldp~slfdv~~rR~heYKRq~LniL~ii~~y~rik~~p~~~~~Pv~~IFaGKAhP~---d~~gK~iIk~I~~va 510 (713)
T PF00343_consen 434 KRTGVELDPDSLFDVQARRFHEYKRQLLNILHIIDRYNRIKNNPNKKIRPVQFIFAGKAHPG---DYMGKEIIKLINNVA 510 (713)
T ss_dssp HHHSS---TTSEEEEEES-SCCCCTHHHHHHHHHHHHHHHHHSTTSCCS-EEEEEE----TT----HHHHHHHHHHHHHH
T ss_pred HHhCCCCCcchhhhhhhhhcccccccCcccccHHHHHHHHHhcccCCCCCeEEEEeccCCCC---cHHHHHHHHHHHHHH
Confidence 34455447777888999999999998883 4556666543 123678888876553 444455566666655
Q ss_pred HH----cCCCC--cEEEccCCCCcCChHHHHHHHHccCcEEEeCCC--CCCCcHHHHHHHHcCCcEEEcCcccccccccc
Q 003962 610 DQ----YKLNG--QFRWISSQMNRVRNGELYRYICDTKGAFVQPAL--YEAFGLTVVEAMTCGLPTFATCKGGPAEIIVN 681 (783)
Q Consensus 610 ~~----~~L~~--~V~flG~~~~~~~~~el~~~ia~aadvfV~PS~--~E~fGltvlEAMa~GlPVVat~~GG~~EiI~d 681 (783)
+. -.+.+ +|.|+. - .+=.+.+.+-.++||-.+.|+ .|+.|..-+=||.-|.+.++|-.|...|+.+.
T Consensus 511 ~~in~Dp~v~~~lkVvFle----n-YdvslA~~lipg~DVwln~p~~p~EASGTSgMK~~~NGaL~lstlDG~niEi~e~ 585 (713)
T PF00343_consen 511 EVINNDPEVGDRLKVVFLE----N-YDVSLAEKLIPGVDVWLNIPTRPKEASGTSGMKAAMNGALNLSTLDGWNIEIAEA 585 (713)
T ss_dssp HHHCT-TTTCCGEEEEEET----T--SHHHHHHHGGG-SEEEE---TTSSSS-SHHHHHHHTT-EEEEESSTCHHHHHHH
T ss_pred HHHhcChhhccceeEEeec----C-CcHHHHHHHhhhhhhhhhCCCCCccccCCCcchhhcCCCeEEecccchhHHHHHh
Confidence 43 23334 789996 2 344667777778999999876 89999999999999999999999999999864
Q ss_pred --CceEEEECCCCHHHHH
Q 003962 682 --GKSGYHIDPYHGEQAA 697 (783)
Q Consensus 682 --g~~G~li~p~d~e~lA 697 (783)
.+|+|+|-. +.+++.
T Consensus 586 vG~eN~fiFG~-~~~ev~ 602 (713)
T PF00343_consen 586 VGEENIFIFGL-TAEEVE 602 (713)
T ss_dssp H-GGGSEEES--BHHHHH
T ss_pred cCCCcEEEcCC-CHHHHH
Confidence 468899854 455543
No 155
>COG1817 Uncharacterized protein conserved in archaea [Function unknown]
Probab=95.78 E-value=1.1 Score=48.60 Aligned_cols=111 Identities=14% Similarity=0.149 Sum_probs=61.6
Q ss_pred CCCCHHHHHHHHHHhHccCCCeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHHcCCCCcEEEccCCCCcCChHHHHHHHH
Q 003962 559 RVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYIC 638 (783)
Q Consensus 559 ~~Kgl~~LieA~~~l~~~~~~~~LvIVG~g~~~~~~~~ee~~~~~~l~~li~~~~L~~~V~flG~~~~~~~~~el~~~ia 638 (783)
..++++.+.+++..+++.. .|++-.. ++.++..+.+. ++... .... +-..++.
T Consensus 199 g~~~~~~~~~li~~l~k~g----iV~ipr~--------------~~~~eife~~~---n~i~p-----k~~v-D~l~Lly 251 (346)
T COG1817 199 GDRGISVLPDLIKELKKYG----IVLIPRE--------------KEQAEIFEGYR---NIIIP-----KKAV-DTLSLLY 251 (346)
T ss_pred cccchhhHHHHHHHHHhCc----EEEecCc--------------hhHHHHHhhhc---cccCC-----cccc-cHHHHHh
Confidence 4677777888888777632 4444433 22334444432 12111 1111 2122333
Q ss_pred ccCcEEEeCCCCCCCcHHHHHHHHcCCcEEEcCcc---ccccccccCceEEEECCCCHHHHHHHHHHHH
Q 003962 639 DTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKG---GPAEIIVNGKSGYHIDPYHGEQAAEILVDFF 704 (783)
Q Consensus 639 ~aadvfV~PS~~E~fGltvlEAMa~GlPVVat~~G---G~~EiI~dg~~G~li~p~d~e~lAeaI~~~l 704 (783)
- |++++ -+-|.---||...|+|.|++.-| +.-+.. -+.|.++..+|+.+..+...+.+
T Consensus 252 y-a~lvi-----g~ggTMarEaAlLGtpaIs~~pGkll~vdk~l--ie~G~~~~s~~~~~~~~~a~~~l 312 (346)
T COG1817 252 Y-ATLVI-----GAGGTMAREAALLGTPAISCYPGKLLAVDKYL--IEKGLLYHSTDEIAIVEYAVRNL 312 (346)
T ss_pred h-hheee-----cCCchHHHHHHHhCCceEEecCCccccccHHH--HhcCceeecCCHHHHHHHHHHHh
Confidence 2 55555 34466679999999999998644 222222 23688888888887666665444
No 156
>COG4671 Predicted glycosyl transferase [General function prediction only]
Probab=95.70 E-value=3.3 Score=45.67 Aligned_cols=134 Identities=15% Similarity=0.115 Sum_probs=74.5
Q ss_pred CCCcEEEEEecccCCCCHH---HHHHHHHHhHccCCCeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHHcCCCCcEEEcc
Q 003962 546 RNKPILFTMARLDRVKNLT---GLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLNGQFRWIS 622 (783)
Q Consensus 546 ~~k~iIl~vGRL~~~Kgl~---~LieA~~~l~~~~~~~~LvIVG~g~~~~~~~~ee~~~~~~l~~li~~~~L~~~V~flG 622 (783)
.+..+++++|-= .-|-+ ..++|+..+....+ .-++|.|..-.. +...++.....-.++|..+-
T Consensus 218 E~~~Ilvs~GGG--~dG~eLi~~~l~A~~~l~~l~~-~~~ivtGP~MP~-----------~~r~~l~~~A~~~p~i~I~~ 283 (400)
T COG4671 218 EGFDILVSVGGG--ADGAELIETALAAAQLLAGLNH-KWLIVTGPFMPE-----------AQRQKLLASAPKRPHISIFE 283 (400)
T ss_pred ccceEEEecCCC--hhhHHHHHHHHHHhhhCCCCCc-ceEEEeCCCCCH-----------HHHHHHHHhcccCCCeEEEE
Confidence 445677777742 23322 23333333333222 236666766542 23334444444456788876
Q ss_pred CCCCcCChHHHHHHHHccCcEEEeCCCCCCCcHHHHHHHHcCCcEEEcCcccccc--ccc------cCceEEEEC-CCCH
Q 003962 623 SQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAE--IIV------NGKSGYHID-PYHG 693 (783)
Q Consensus 623 ~~~~~~~~~el~~~ia~aadvfV~PS~~E~fGltvlEAMa~GlPVVat~~GG~~E--iI~------dg~~G~li~-p~d~ 693 (783)
+.. ++..+++. |+..|.=+- + +|+.|-++.|+|.+.-..+.+.| .|. =|-..++.+ .-++
T Consensus 284 f~~------~~~~ll~g-A~~vVSm~G---Y-NTvCeILs~~k~aLivPr~~p~eEQliRA~Rl~~LGL~dvL~pe~lt~ 352 (400)
T COG4671 284 FRN------DFESLLAG-ARLVVSMGG---Y-NTVCEILSFGKPALIVPRAAPREEQLIRAQRLEELGLVDVLLPENLTP 352 (400)
T ss_pred hhh------hHHHHHHh-hheeeeccc---c-hhhhHHHhCCCceEEeccCCCcHHHHHHHHHHHhcCcceeeCcccCCh
Confidence 433 56778885 888876432 2 58999999999999876655544 221 132333322 2247
Q ss_pred HHHHHHHHHHH
Q 003962 694 EQAAEILVDFF 704 (783)
Q Consensus 694 e~lAeaI~~~l 704 (783)
+.+|++|...+
T Consensus 353 ~~La~al~~~l 363 (400)
T COG4671 353 QNLADALKAAL 363 (400)
T ss_pred HHHHHHHHhcc
Confidence 77888885544
No 157
>PF11440 AGT: DNA alpha-glucosyltransferase; InterPro: IPR016223 The T4 bacteriophage of E.coli protects its DNA via two glycosyltransferases which glucosylate 5-hydroxymethyl cytosines (5-HMC) using UDP-glucose. These two proteins are the retaining alpha-glucosyltransferase (AGT) and the inverting beta-glucosyltransferase (BGT). The proteins in this family are AGT. AGT adopts the GT-B fold and binds both the sugar donor and acceptor to the C-terminal domain. There is evidence for a role of AGT in the base-flipping mechanism and for its specific recognition of the acceptor base [].; PDB: 1YA6_B 1Y8Z_B 1Y6F_B 1XV5_A 1Y6G_B.
Probab=95.60 E-value=2.4 Score=45.15 Aligned_cols=145 Identities=17% Similarity=0.093 Sum_probs=82.3
Q ss_pred CCCCcEE---EEEecccCCCCHHHHHHHHHHhHccCCCeEEEEEeCCCCCCCccHHHHHHHHHHHH----------HHHH
Q 003962 545 DRNKPIL---FTMARLDRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYS----------LIDQ 611 (783)
Q Consensus 545 ~~~k~iI---l~vGRL~~~Kgl~~LieA~~~l~~~~~~~~LvIVG~g~~~~~~~~ee~~~~~~l~~----------li~~ 611 (783)
+.++... .|+||....||+..+++..++..+. ++..-++-|=.... +.+.-... .+.+
T Consensus 177 d~se~nmnv~~yigR~Tt~kG~~~mfD~h~~~lK~-~~~~t~~~GierS~--------A~~~i~d~~~~~~y~~~~~~~~ 247 (355)
T PF11440_consen 177 DVSEKNMNVNRYIGRQTTWKGPRRMFDLHEKILKP-AGFKTIMEGIERSP--------AKISIKDHGIPYEYYPKLDCDE 247 (355)
T ss_dssp -GGGSEEEEEEEE--SSGGG-HHHHHHHHHHTTTT-TT-EEEEE---SST--------HHHHHHHTT--EEEE-CTGGGG
T ss_pred hhHhhhcccceeeeeeeeecCcHHHhhhHHHhcCC-cchhHHhhhhhcCC--------ceeeeecCCcccccCccccccC
Confidence 3444444 8999999999999999998886654 56777776643210 11111100 0111
Q ss_pred cCC--CCcEEEccCCCCcCChHHHHHHHHccCcEEEeCCC------CCCCcHHHHHHHHcCC-cEEEcCcccccc-----
Q 003962 612 YKL--NGQFRWISSQMNRVRNGELYRYICDTKGAFVQPAL------YEAFGLTVVEAMTCGL-PTFATCKGGPAE----- 677 (783)
Q Consensus 612 ~~L--~~~V~flG~~~~~~~~~el~~~ia~aadvfV~PS~------~E~fGltvlEAMa~Gl-PVVat~~GG~~E----- 677 (783)
..+ ...+-.+| +.-++|....|+. +...++-+. -+..-.+-+|..|||+ ||+-+..|...-
T Consensus 248 ~~~~pN~~~~v~~----~Yi~~E~~~~Mak-s~Fgy~~~k~~~~y~~r~mEYt~iE~~A~GtIPVF~k~~GEN~r~~~D~ 322 (355)
T PF11440_consen 248 PKPAPNSPVPVYG----PYIRSEGLERMAK-SLFGYQLSKLQQKYLQRSMEYTQIELIAVGTIPVFDKSWGENNRFTLDG 322 (355)
T ss_dssp ---SSS--EEEES----S--HHHHHHHHHT-EEEEEE-----GGG-SS---HHHHHHHHCTSEEEEEHHHHHHSB-TTTS
T ss_pred cccCCCCcceecc----hhhhHHHHHHHhh-ccceeecHHHHHHHHHhhhhhheeeeeeeceeeeeeccccccceeeecC
Confidence 111 23466777 6778899999996 656655443 3457789999999997 888887776544
Q ss_pred --ccccCceEEEECCCCHHHHHHHHHHH
Q 003962 678 --IIVNGKSGYHIDPYHGEQAAEILVDF 703 (783)
Q Consensus 678 --iI~dg~~G~li~p~d~e~lAeaI~~~ 703 (783)
.+.+.-+.+.+|..|.++..++|.++
T Consensus 323 ~~~~~~~~~~I~~De~dle~T~ekl~E~ 350 (355)
T PF11440_consen 323 TRYIDHPYSAIYFDENDLESTVEKLIEV 350 (355)
T ss_dssp SBGGSS--S-EEE-TTSHHHHHHHHHHH
T ss_pred ceeeccCcceeEeccchHHHHHHHHHHH
Confidence 33344467789999999999998654
No 158
>PLN02555 limonoid glucosyltransferase
Probab=95.59 E-value=6.4 Score=45.91 Aligned_cols=94 Identities=17% Similarity=0.182 Sum_probs=57.3
Q ss_pred CCcEEEccCCCCcCChHHHHHHHHccCcEEEeCCCCCCCcHHHHHHHHcCCcEEEcCc----cccccccccC-ceEEEEC
Q 003962 615 NGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCK----GGPAEIIVNG-KSGYHID 689 (783)
Q Consensus 615 ~~~V~flG~~~~~~~~~el~~~ia~aadvfV~PS~~E~fGltvlEAMa~GlPVVat~~----GG~~EiI~dg-~~G~li~ 689 (783)
.+++...+ +++..++... .+.++||.= +=-++++||+.+|+|+|+... ...+..+.+. +.|+-+.
T Consensus 336 ~~~g~v~~----W~PQ~~iL~H--~~v~~FvtH----~G~nS~~Eai~~GVP~l~~P~~~DQ~~Na~~~~~~~gvGv~l~ 405 (480)
T PLN02555 336 GDKGKIVQ----WCPQEKVLAH--PSVACFVTH----CGWNSTMEALSSGVPVVCFPQWGDQVTDAVYLVDVFKTGVRLC 405 (480)
T ss_pred CCceEEEe----cCCHHHHhCC--CccCeEEec----CCcchHHHHHHcCCCEEeCCCccccHHHHHHHHHHhCceEEcc
Confidence 45666666 6777776642 135566642 223489999999999999743 3344444444 5677662
Q ss_pred -----C--CCHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHH
Q 003962 690 -----P--YHGEQAAEILVDFFEKCKADPSYWDKISLGGLK 723 (783)
Q Consensus 690 -----p--~d~e~lAeaI~~~l~~l~~dp~~~~~ms~~a~~ 723 (783)
. -+.++++++|.+++ .+++ .++|.++|++
T Consensus 406 ~~~~~~~~v~~~~v~~~v~~vm----~~~~-g~~~r~ra~~ 441 (480)
T PLN02555 406 RGEAENKLITREEVAECLLEAT----VGEK-AAELKQNALK 441 (480)
T ss_pred CCccccCcCcHHHHHHHHHHHh----cCch-HHHHHHHHHH
Confidence 1 25788888887766 4432 3444444443
No 159
>KOG1050 consensus Trehalose-6-phosphate synthase component TPS1 and related subunits [Carbohydrate transport and metabolism]
Probab=95.55 E-value=0.87 Score=55.26 Aligned_cols=154 Identities=13% Similarity=0.178 Sum_probs=110.5
Q ss_pred CCCcEEEEEecccCCCCHHHHHHHHHHhHccCC----CeEEEEEeCCCCCCCccH-HHHHHHHHHHHHHHH-cCC--CCc
Q 003962 546 RNKPILFTMARLDRVKNLTGLVEWYGKNAKLRE----LVNLVVVGGDRRKESKDL-EEQAEMKKMYSLIDQ-YKL--NGQ 617 (783)
Q Consensus 546 ~~k~iIl~vGRL~~~Kgl~~LieA~~~l~~~~~----~~~LvIVG~g~~~~~~~~-ee~~~~~~l~~li~~-~~L--~~~ 617 (783)
.++.+|+-+-|++..||+..=+.++.++...+| .+.++.+..+......+. +...+.......+.+ .+- ...
T Consensus 274 ~g~klilgvD~~d~~kg~~~Kl~a~e~~L~~~pe~~~kVvliqi~~~~~~~~~~v~~~k~~v~~~v~rIn~~f~~~~~~p 353 (732)
T KOG1050|consen 274 KGKKLILGVDRLDSIKGIQLKLLAFEQFLEEYPEWIDKVVLIQIENPKRTDGKEVEELKFCVSVHVRRINEKFGSASYQP 353 (732)
T ss_pred cCCceEecccccccccCchHHHHHHHHHHHhChhhhceEEEEEEecCCcccchHHHHHHHHhHhhhhhhhhccCCcccce
Confidence 467789999999999999988888888877665 466777766654222211 112222222222222 121 123
Q ss_pred EEEccCCCCcCChHHHHHHHHccCcEEEeCCCCCCCcHHHHHHHHcC----CcEEEcCccccccccccCceEEEECCCCH
Q 003962 618 FRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCG----LPTFATCKGGPAEIIVNGKSGYHIDPYHG 693 (783)
Q Consensus 618 V~flG~~~~~~~~~el~~~ia~aadvfV~PS~~E~fGltvlEAMa~G----lPVVat~~GG~~EiI~dg~~G~li~p~d~ 693 (783)
|+++- ..++..++.++++ .+|+....++-+|..++.+|+.+|. .+.|.+..-|..+..+++ ..+++|.|.
T Consensus 354 V~~~~---~~~~~~~l~a~~~-Vaev~~v~s~rdGmnl~~~e~i~~~~~~~~~lVlsef~G~~~tl~d~--aivvnpw~~ 427 (732)
T KOG1050|consen 354 VHSLL---KDLPFLELLALYK-VAEVCPVTSWRDGMNLVFLEYILCQENKKSVLVLSEFIGDDTTLEDA--AIVVNPWDG 427 (732)
T ss_pred EEEee---ccCCHHHHhhhHH-hhhheeecccccccchhhhHHHHhhcccCCceEEeeecccccccccc--CEEECCcch
Confidence 44443 3677788999888 4999999999999999999999985 778888888888877554 678899999
Q ss_pred HHHHHHHHHHHH
Q 003962 694 EQAAEILVDFFE 705 (783)
Q Consensus 694 e~lAeaI~~~l~ 705 (783)
++++.+|..++.
T Consensus 428 ~~~~~~i~~al~ 439 (732)
T KOG1050|consen 428 DEFAILISKALT 439 (732)
T ss_pred HHHHHHHHHHhh
Confidence 999999987773
No 160
>PF07429 Glyco_transf_56: 4-alpha-L-fucosyltransferase glycosyl transferase group 56; InterPro: IPR009993 This family contains the bacterial enzyme 4-alpha-L-fucosyltransferase (Fuc4NAc transferase) (approximately 360 residues long). This catalyses the synthesis of Fuc4NAc-ManNAcA-GlcNAc-PP-Und (lipid III) as part of the biosynthetic pathway of enterobacterial common antigen (ECA), a polysaccharide comprised of the trisaccharide repeat unit Fuc4NAc-ManNAcA-GlcNAc [].; GO: 0008417 fucosyltransferase activity, 0009246 enterobacterial common antigen biosynthetic process, 0009276 Gram-negative-bacterium-type cell wall
Probab=95.31 E-value=1.3 Score=48.70 Aligned_cols=123 Identities=11% Similarity=0.070 Sum_probs=87.5
Q ss_pred CCcEEEEEecc-cCCCCHHHHHHHHHHhHccCCCeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHHcCCCCcEEEccCCC
Q 003962 547 NKPILFTMARL-DRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQM 625 (783)
Q Consensus 547 ~k~iIl~vGRL-~~~Kgl~~LieA~~~l~~~~~~~~LvIVG~g~~~~~~~~ee~~~~~~l~~li~~~~L~~~V~flG~~~ 625 (783)
+++.-+-+|+- ++..|...+++++.+.. ..++++++-=+-+.. ..++++++.+..+++--.+++..+-
T Consensus 183 ~~~ltILvGNSgd~sNnHieaL~~L~~~~--~~~~kIivPLsYg~~------n~~Yi~~V~~~~~~lF~~~~~~iL~--- 251 (360)
T PF07429_consen 183 KGKLTILVGNSGDPSNNHIEALEALKQQF--GDDVKIIVPLSYGAN------NQAYIQQVIQAGKELFGAENFQILT--- 251 (360)
T ss_pred CCceEEEEcCCCCCCccHHHHHHHHHHhc--CCCeEEEEECCCCCc------hHHHHHHHHHHHHHhcCccceeEhh---
Confidence 34555667764 57778888888776533 356776665333220 1367888888888876557888775
Q ss_pred CcCChHHHHHHHHccCcEEEeCCC-CCCCcHHHHHHHHcCCcEEEcCcccc-ccccccC
Q 003962 626 NRVRNGELYRYICDTKGAFVQPAL-YEAFGLTVVEAMTCGLPTFATCKGGP-AEIIVNG 682 (783)
Q Consensus 626 ~~~~~~el~~~ia~aadvfV~PS~-~E~fGltvlEAMa~GlPVVat~~GG~-~EiI~dg 682 (783)
+.++-+|..++++. +|+.++... -.|.| +++=.+.+|+||+-+...-. .++.+.+
T Consensus 252 e~mpf~eYl~lL~~-cDl~if~~~RQQgiG-nI~lLl~~G~~v~L~~~np~~~~l~~~~ 308 (360)
T PF07429_consen 252 EFMPFDEYLALLSR-CDLGIFNHNRQQGIG-NICLLLQLGKKVFLSRDNPFWQDLKEQG 308 (360)
T ss_pred hhCCHHHHHHHHHh-CCEEEEeechhhhHh-HHHHHHHcCCeEEEecCChHHHHHHhCC
Confidence 47889999999996 999999875 78888 56779999999999865544 4444443
No 161
>PF06258 Mito_fiss_Elm1: Mitochondrial fission ELM1; InterPro: IPR009367 This family consists of several hypothetical eukaryotic and prokaryotic proteins. The function of this family is unknown.
Probab=95.20 E-value=1.8 Score=47.47 Aligned_cols=110 Identities=14% Similarity=0.075 Sum_probs=65.5
Q ss_pred CCCcEEEEEecccCCC--CHH---HHHHHHHHhHccCCCeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHHcCCCCcEEE
Q 003962 546 RNKPILFTMARLDRVK--NLT---GLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLNGQFRW 620 (783)
Q Consensus 546 ~~k~iIl~vGRL~~~K--gl~---~LieA~~~l~~~~~~~~LvIVG~g~~~~~~~~ee~~~~~~l~~li~~~~L~~~V~f 620 (783)
+.+.+.+.+|.=++.- +-+ .+++.+..+.+..+ ..+.|...-... .+..+.+.+..+ -.+.+.+
T Consensus 145 ~~p~~avLIGG~s~~~~~~~~~~~~l~~~l~~~~~~~~-~~~~vttSRRTp-------~~~~~~L~~~~~---~~~~~~~ 213 (311)
T PF06258_consen 145 PRPRVAVLIGGDSKHYRWDEEDAERLLDQLAALAAAYG-GSLLVTTSRRTP-------PEAEAALRELLK---DNPGVYI 213 (311)
T ss_pred CCCeEEEEECcCCCCcccCHHHHHHHHHHHHHHHHhCC-CeEEEEcCCCCc-------HHHHHHHHHhhc---CCCceEE
Confidence 4455667888643322 223 56666666666555 788888876432 122333333332 3456633
Q ss_pred ccCCCCcCChHHHHHHHHccCcEEEeCCCCCCCcHHHHHHHHcCCcEEEcCccc
Q 003962 621 ISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGG 674 (783)
Q Consensus 621 lG~~~~~~~~~el~~~ia~aadvfV~PS~~E~fGltvlEAMa~GlPVVat~~GG 674 (783)
.. .. ...-+..+++. +|.+|.+.- .-.-+.||.++|+||..-...+
T Consensus 214 ~~-~~---~~nPy~~~La~-ad~i~VT~D---SvSMvsEA~~tG~pV~v~~l~~ 259 (311)
T PF06258_consen 214 WD-GT---GENPYLGFLAA-ADAIVVTED---SVSMVSEAAATGKPVYVLPLPG 259 (311)
T ss_pred ec-CC---CCCcHHHHHHh-CCEEEEcCc---cHHHHHHHHHcCCCEEEecCCC
Confidence 33 12 12235667774 999998744 3345899999999999987766
No 162
>COG3980 spsG Spore coat polysaccharide biosynthesis protein, predicted glycosyltransferase [Cell envelope biogenesis, outer membrane]
Probab=94.72 E-value=1.3 Score=47.33 Aligned_cols=139 Identities=19% Similarity=0.270 Sum_probs=80.1
Q ss_pred CCcEEEEEecccCCCCHHHHHHHHHHhHccCCCeEEEEEeC-CCCCCCccHHHHHHHHHHHHHHHHcCCCCcEEEccCCC
Q 003962 547 NKPILFTMARLDRVKNLTGLVEWYGKNAKLRELVNLVVVGG-DRRKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQM 625 (783)
Q Consensus 547 ~k~iIl~vGRL~~~Kgl~~LieA~~~l~~~~~~~~LvIVG~-g~~~~~~~~ee~~~~~~l~~li~~~~L~~~V~flG~~~ 625 (783)
.+.+++++|--++ ||+.. +.++.+.. .++++.||-+ +.+ ....+++.+++ .+++.++-
T Consensus 158 ~r~ilI~lGGsDp-k~lt~--kvl~~L~~--~~~nl~iV~gs~~p----------~l~~l~k~~~~---~~~i~~~~--- 216 (318)
T COG3980 158 KRDILITLGGSDP-KNLTL--KVLAELEQ--KNVNLHIVVGSSNP----------TLKNLRKRAEK---YPNINLYI--- 216 (318)
T ss_pred hheEEEEccCCCh-hhhHH--HHHHHhhc--cCeeEEEEecCCCc----------chhHHHHHHhh---CCCeeeEe---
Confidence 3457888887666 66543 44444443 2366655544 322 13445555554 46777764
Q ss_pred CcCChHHHHHHHHccCcEEEeCCCCCCCcHHHHHHHHcCCcEEE----cCcccccccccc----CceEEEECCCCHHHHH
Q 003962 626 NRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFA----TCKGGPAEIIVN----GKSGYHIDPYHGEQAA 697 (783)
Q Consensus 626 ~~~~~~el~~~ia~aadvfV~PS~~E~fGltvlEAMa~GlPVVa----t~~GG~~EiI~d----g~~G~li~p~d~e~lA 697 (783)
...++.++|.+ +|+.+.. -|.|+.||...|+|.++ .+.-..+..... ...|++. ......
T Consensus 217 ---~~~dma~LMke-~d~aI~A-----aGstlyEa~~lgvP~l~l~~a~NQ~~~a~~f~~lg~~~~l~~~l---~~~~~~ 284 (318)
T COG3980 217 ---DTNDMAELMKE-ADLAISA-----AGSTLYEALLLGVPSLVLPLAENQIATAKEFEALGIIKQLGYHL---KDLAKD 284 (318)
T ss_pred ---cchhHHHHHHh-cchheec-----cchHHHHHHHhcCCceEEeeeccHHHHHHHHHhcCchhhccCCC---chHHHH
Confidence 34568888887 8877753 48899999999999333 232222222211 2345553 234444
Q ss_pred HHHHHHHHHhhCCHHHHHHHHHHHH
Q 003962 698 EILVDFFEKCKADPSYWDKISLGGL 722 (783)
Q Consensus 698 eaI~~~l~~l~~dp~~~~~ms~~a~ 722 (783)
..+.+ +..|+..++.++....
T Consensus 285 ~~~~~----i~~d~~~rk~l~~~~~ 305 (318)
T COG3980 285 YEILQ----IQKDYARRKNLSFGSK 305 (318)
T ss_pred HHHHH----hhhCHHHhhhhhhccc
Confidence 55533 3478888877766543
No 163
>PF04464 Glyphos_transf: CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase ; InterPro: IPR007554 Wall-associated teichoic acids are a heterogeneous class of phosphate-rich polymers that are covalently linked to the cell wall peptidoglycan of Gram-positive bacteria. They consist of a main chain of phosphodiester-linked polyols and/or sugar moieties attached to peptidoglycan via a linkage unit. CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase is responsible for the polymerisation of the main chain of the teichoic acid by sequential transfer of glycerol-phosphate units from CDP-glycerol to the linkage unit lipid [].; GO: 0047355 CDP-glycerol glycerophosphotransferase activity, 0016020 membrane; PDB: 3L7K_B 3L7L_D 3L7I_A 3L7J_D 3L7M_D.
Probab=94.51 E-value=0.29 Score=54.63 Aligned_cols=236 Identities=14% Similarity=0.138 Sum_probs=103.0
Q ss_pred ceEEEEcCCCchHHHHHHHHhcCCcEEEEecCCCccCCCCCchhhhhccccccccchhhHhHHhhhcCCEEEcCCHHHHh
Q 003962 384 PDLIIGNYSDGNIVASLLAHKLGVTQCTIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTFQEIA 463 (783)
Q Consensus 384 pDIIh~h~~~~~lva~llar~lgvp~v~t~H~l~~~~~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~~~ 463 (783)
..+++++.....+. ....+.+.++|.+.||. +.+.- .+...... ... ..........|.++++|+.+..
T Consensus 79 Ak~~i~~~~~~~~~--~~~~~~~~~~i~lwHG~-~~K~~----g~~~~~~~-~~~---~~~~~~~~~~d~~~~~s~~~~~ 147 (369)
T PF04464_consen 79 AKYIISDSYFPDLI--YFKKRKNQKYIQLWHGI-PLKKI----GYDSPDNK-NYR---KNYKRNYRNYDYFIVSSEFEKE 147 (369)
T ss_dssp EEEEEESS---T----TS---TTSEEEE--SS---SB------GGG-S----TS----HHHHHHHTT-SEEEESSHHHHH
T ss_pred CcEEEECCCCCccc--ccccCCCcEEEEecCCC-ccccc----chhccccc-cch---hhhhhhccCCcEEEECCHHHHH
Confidence 57888774333222 12334678999999997 33311 01000000 000 0112356788999999987766
Q ss_pred hccccccccccccccccccceeeeccCCCCCCcEEEecCCccCC-CC-CCCchHHHhhccCchhhHHhhcChhhhhhhhc
Q 003962 464 GSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMS-IY-FPYTEEKRRLKSFHPEIEELLYSDVENKEHLC 541 (783)
Q Consensus 464 ~~~~~v~qy~~~~~f~~p~l~~v~~gi~~~~~k~~VIpnGvD~~-~f-~p~~~~~~r~~~~~~~~~~~l~~~~~~~~~~g 541 (783)
-+.+.. +++ ..++. ..|..-. .+ ...... .....+.+|
T Consensus 148 ~~~~~f-------------------~~~--~~~i~--~~G~PR~D~l~~~~~~~-----------------~~~i~~~~~ 187 (369)
T PF04464_consen 148 IFKKAF-------------------GYP--EDKIL--VTGYPRNDYLFNKSKEN-----------------RNRIKKKLG 187 (369)
T ss_dssp HHHHHT-------------------T----GGGEE--ES--GGGHHHHHSTT-H-----------------HHHHHHHTT
T ss_pred HHHHHh-------------------ccC--cceEE--EeCCCeEhHHhccCHHH-----------------HHHHHHHhc
Confidence 433322 222 33443 3444211 11 111110 112345567
Q ss_pred cccCCCCcEEEEEecccCCCCH------HHHH--HHHHHhHccCCCeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHH-c
Q 003962 542 VLKDRNKPILFTMARLDRVKNL------TGLV--EWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQ-Y 612 (783)
Q Consensus 542 ll~~~~k~iIl~vGRL~~~Kgl------~~Li--eA~~~l~~~~~~~~LvIVG~g~~~~~~~~ee~~~~~~l~~li~~-~ 612 (783)
+ +.++.+|+|+=.+.....- ...+ +.+. ....+++.+++-.... +...... .
T Consensus 188 ~--~~~~k~ILyaPT~R~~~~~~~~~~~~~~~~~~~l~--~~~~~~~~li~k~Hp~---------------~~~~~~~~~ 248 (369)
T PF04464_consen 188 I--DKDKKVILYAPTWRDNSSNEYFKFFFSDLDFEKLN--FLLKNNYVLIIKPHPN---------------MKKKFKDFK 248 (369)
T ss_dssp ----SS-EEEEEE----GGG--GGSS----TT-HHHHH--HHHTTTEEEEE--SHH---------------HHTT----T
T ss_pred c--CCCCcEEEEeeccccccccccccccccccCHHHHH--HHhCCCcEEEEEeCch---------------hhhchhhhh
Confidence 6 6777799999665432221 2222 2222 2234677777665431 1111111 3
Q ss_pred CCCCcEEEccCCCCcCChHHHHHHHHccCcEEEeCCCCCCCcHHHHHHHHcCCcEEEc--Cc-------cccccccccCc
Q 003962 613 KLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFAT--CK-------GGPAEIIVNGK 683 (783)
Q Consensus 613 ~L~~~V~flG~~~~~~~~~el~~~ia~aadvfV~PS~~E~fGltvlEAMa~GlPVVat--~~-------GG~~EiI~dg~ 683 (783)
...++|.++.. ..+++.++.. +|++|.= ++-++.|++.+++|||-. +. |...+ ..+..
T Consensus 249 ~~~~~i~~~~~------~~~~~~ll~~-aDiLITD-----ySSi~fD~~~l~KPiify~~D~~~Y~~~rg~~~~-~~~~~ 315 (369)
T PF04464_consen 249 EDNSNIIFVSD------NEDIYDLLAA-ADILITD-----YSSIIFDFLLLNKPIIFYQPDLEEYEKERGFYFD-YEEDL 315 (369)
T ss_dssp T-TTTEEE-TT-------S-HHHHHHT--SEEEES-----S-THHHHHGGGT--EEEE-TTTTTTTTTSSBSS--TTTSS
T ss_pred ccCCcEEECCC------CCCHHHHHHh-cCEEEEe-----chhHHHHHHHhCCCEEEEeccHHHHhhccCCCCc-hHhhC
Confidence 34578888751 2368888885 9999963 556899999999999964 33 22223 22233
Q ss_pred eEEEECCCCHHHHHHHHHHHH
Q 003962 684 SGYHIDPYHGEQAAEILVDFF 704 (783)
Q Consensus 684 ~G~li~p~d~e~lAeaI~~~l 704 (783)
.|-.+. +.+++.++|..++
T Consensus 316 pg~~~~--~~~eL~~~i~~~~ 334 (369)
T PF04464_consen 316 PGPIVY--NFEELIEAIENII 334 (369)
T ss_dssp SS-EES--SHHHHHHHHTTHH
T ss_pred CCceeC--CHHHHHHHHHhhh
Confidence 455554 8999999996655
No 164
>COG3660 Predicted nucleoside-diphosphate-sugar epimerase [Cell envelope biogenesis, outer membrane]
Probab=93.98 E-value=5.8 Score=42.06 Aligned_cols=112 Identities=9% Similarity=0.033 Sum_probs=64.2
Q ss_pred CCCCcEEEEEecccCCCCH-----HHHHHHHHHhHccCCCeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHH-cCCCCcE
Q 003962 545 DRNKPILFTMARLDRVKNL-----TGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQ-YKLNGQF 618 (783)
Q Consensus 545 ~~~k~iIl~vGRL~~~Kgl-----~~LieA~~~l~~~~~~~~LvIVG~g~~~~~~~~ee~~~~~~l~~li~~-~~L~~~V 618 (783)
.+...+-+.+|.-.+.-.+ ..++.++-+..+. ..+.+++--.-... +..+.+++. +.-..-+
T Consensus 159 ~~rq~vAVlVGg~nk~f~~~~d~a~q~~~~l~k~l~~-~g~~~lisfSRRTp-----------~~~~s~l~~~l~s~~~i 226 (329)
T COG3660 159 LPRQRVAVLVGGNNKAFVFQEDKAHQFASLLVKILEN-QGGSFLISFSRRTP-----------DTVKSILKNNLNSSPGI 226 (329)
T ss_pred CCCceEEEEecCCCCCCccCHHHHHHHHHHHHHHHHh-CCceEEEEeecCCc-----------HHHHHHHHhccccCcee
Confidence 4555677888876654443 2233333333222 24566666554321 344555554 4444557
Q ss_pred EEccCCCCcCChHHHHHHHHccCcEEEeCCCCCCCcHHHHHHHHcCCcEEEcCcccc
Q 003962 619 RWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGP 675 (783)
Q Consensus 619 ~flG~~~~~~~~~el~~~ia~aadvfV~PS~~E~fGltvlEAMa~GlPVVat~~GG~ 675 (783)
.|-+.-++..+ ...+++ +||.+|.+.-. =.-..||.+.|+||++-.-.+.
T Consensus 227 ~w~~~d~g~NP---Y~~~La-~Adyii~TaDS---inM~sEAasTgkPv~~~~~~~~ 276 (329)
T COG3660 227 VWNNEDTGYNP---YIDMLA-AADYIISTADS---INMCSEAASTGKPVFILEPPNF 276 (329)
T ss_pred EeCCCCCCCCc---hHHHHh-hcceEEEecch---hhhhHHHhccCCCeEEEecCCc
Confidence 77764333333 455666 59999987552 2246899999999998754443
No 165
>PLN02152 indole-3-acetate beta-glucosyltransferase
Probab=93.29 E-value=20 Score=41.60 Aligned_cols=140 Identities=16% Similarity=0.162 Sum_probs=71.7
Q ss_pred CCcEEEEEeccc--CCCCHHHHHHHHHHhHccCCCeEEEEEeCCCCC-CCccHHHHHHHHHHHHHHHHcCCCCcEEEccC
Q 003962 547 NKPILFTMARLD--RVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRK-ESKDLEEQAEMKKMYSLIDQYKLNGQFRWISS 623 (783)
Q Consensus 547 ~k~iIl~vGRL~--~~Kgl~~LieA~~~l~~~~~~~~LvIVG~g~~~-~~~~~ee~~~~~~l~~li~~~~L~~~V~flG~ 623 (783)
+..+.++.|.+. +.+.+..++.++..+. .--|.++.+.... ...+.+............++ ..++....+
T Consensus 261 ~sVvyvsfGS~~~l~~~q~~ela~gL~~s~----~~flWv~r~~~~~~~~~~~~~~~~~~~~~~f~e~--~~~~g~v~~- 333 (455)
T PLN02152 261 SSVIYVSFGTMVELSKKQIEELARALIEGK----RPFLWVITDKLNREAKIEGEEETEIEKIAGFRHE--LEEVGMIVS- 333 (455)
T ss_pred CceEEEEecccccCCHHHHHHHHHHHHHcC----CCeEEEEecCcccccccccccccccccchhHHHh--ccCCeEEEe-
Confidence 355678888875 3455666666666553 2233444432110 00000000000001122222 235555666
Q ss_pred CCCcCChHHHHHHHHccCc--EEEeCCCCCCCcHHHHHHHHcCCcEEEcCc----cccccccccC-ceEEEEC-----CC
Q 003962 624 QMNRVRNGELYRYICDTKG--AFVQPALYEAFGLTVVEAMTCGLPTFATCK----GGPAEIIVNG-KSGYHID-----PY 691 (783)
Q Consensus 624 ~~~~~~~~el~~~ia~aad--vfV~PS~~E~fGltvlEAMa~GlPVVat~~----GG~~EiI~dg-~~G~li~-----p~ 691 (783)
+++..++.. ... +||.= +=.++++||+.+|+|+|+-.. ...+..+.+. +.|+-+. .-
T Consensus 334 ---W~PQ~~iL~----h~~vg~fvtH----~G~nS~~Ea~~~GvP~l~~P~~~DQ~~na~~~~~~~~~G~~~~~~~~~~~ 402 (455)
T PLN02152 334 ---WCSQIEVLR----HRAVGCFVTH----CGWSSSLESLVLGVPVVAFPMWSDQPANAKLLEEIWKTGVRVRENSEGLV 402 (455)
T ss_pred ---eCCHHHHhC----CcccceEEee----CCcccHHHHHHcCCCEEeccccccchHHHHHHHHHhCceEEeecCcCCcC
Confidence 666666655 244 44432 223589999999999999643 3334444441 2455442 12
Q ss_pred CHHHHHHHHHHHH
Q 003962 692 HGEQAAEILVDFF 704 (783)
Q Consensus 692 d~e~lAeaI~~~l 704 (783)
+.+++++++.+++
T Consensus 403 ~~e~l~~av~~vm 415 (455)
T PLN02152 403 ERGEIRRCLEAVM 415 (455)
T ss_pred cHHHHHHHHHHHH
Confidence 6788999997776
No 166
>PF05159 Capsule_synth: Capsule polysaccharide biosynthesis protein; InterPro: IPR007833 This family includes export proteins involved in capsule polysaccharide biosynthesis, such as KpsS P42218 from SWISSPROT and LipB P57038 from SWISSPROT. Capsule polysaccharide modification protein lipB/A is involved in the phospholipid modification of the capsular polysaccharide and is a strong requirement for its translocation to the cell surface. The capsule of Neisseria meningitidis serogroup B and of other meningococcal serogroups and other Gram-negative bacterial pathogens, are anchored in the outer membrane through a 1,2-diacylglycerol moiety. The lipA and lipB genes are located on the 3' end of the ctr operon. lipA and lipB do not encode proteins responsible for diacylglycerophosphatidic acid substitution of the meningococcal capsule polymer, but they are required for proper translocation and surface expression of the lipidated polymer []. KpsS is an unusual sulphate-modified form of the capsular polysaccharide in Rhizobium loti (Mesorhizobium loti). Many plants, including R. loti, enter into symbiotic relationships with bacteria that allow survival in nutrient-limiting environments. KpsS functions as a fucosyl sulphotransferase in vitro. The kpsS gene product shares no significant amino acid similarity with previously identified sulphotransferases []. Sulphated cell surface polysaccharides are required for optimum nodule formation but limit growth rate and nodule colonisation in M. loti [].; GO: 0000271 polysaccharide biosynthetic process, 0015774 polysaccharide transport
Probab=92.93 E-value=11 Score=40.06 Aligned_cols=123 Identities=19% Similarity=0.172 Sum_probs=69.0
Q ss_pred CCCCcEEEEEecccCC-------CCHHHHHHHHHHhHccCCCeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHHc-CCCC
Q 003962 545 DRNKPILFTMARLDRV-------KNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQY-KLNG 616 (783)
Q Consensus 545 ~~~k~iIl~vGRL~~~-------Kgl~~LieA~~~l~~~~~~~~LvIVG~g~~~~~~~~ee~~~~~~l~~li~~~-~L~~ 616 (783)
..++++|++....... .+...+.+.+..+.+..|+++++|== .|...... . .....+. +. .
T Consensus 114 ~~~~~~vlv~lQ~~~D~~i~~~~~~~~~~~~~l~~~~~~~p~~~lvvK~-HP~~~~~~--------~-~~~~~~~~~~-~ 182 (269)
T PF05159_consen 114 SKNKKYVLVPLQVENDSQIRYHSPSQADFLDMLESFAKENPDAKLVVKP-HPDERGGN--------K-YSYLEELPNL-P 182 (269)
T ss_pred cCCCCEEEEEeeCCcCcchhccCCcHhHHHHHHHHHHHHCCCCEEEEEE-CchhhCCC--------C-hhHhhhhhcC-C
Confidence 5677888888887654 24456667777777767888876544 34210000 0 0222222 33 3
Q ss_pred cEEEccCCCCcCChHHHHHHHHccCcEEEeCCCCCCCcHHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHHHH
Q 003962 617 QFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQA 696 (783)
Q Consensus 617 ~V~flG~~~~~~~~~el~~~ia~aadvfV~PS~~E~fGltvlEAMa~GlPVVat~~GG~~EiI~dg~~G~li~p~d~e~l 696 (783)
++.++.. . ..++.++.. +|.+|.- .+.+-+||+.+|+||++....-. ...|+..+....+.+
T Consensus 183 ~~~~~~~---~---~~~~~Ll~~-s~~Vvti-----nStvGlEAll~gkpVi~~G~~~Y------~~~glt~~~~~~~~~ 244 (269)
T PF05159_consen 183 NVVIIDD---D---VNLYELLEQ-SDAVVTI-----NSTVGLEALLHGKPVIVFGRAFY------AGWGLTDDRKLDEFW 244 (269)
T ss_pred CeEEECC---C---CCHHHHHHh-CCEEEEE-----CCHHHHHHHHcCCceEEecCccc------CCCCccCcCCchhhh
Confidence 4444431 2 245666665 6655542 24588999999999999633222 124666655443333
No 167
>PF04101 Glyco_tran_28_C: Glycosyltransferase family 28 C-terminal domain; InterPro: IPR007235 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 28 GT28 from CAZY comprises enzymes with a number of known activities; 1,2-diacylglycerol 3-beta-galactosyltransferase (2.4.1.46 from EC); 1,2-diacylglycerol 3-beta-glucosyltransferase (2.4.1.157 from EC); beta-N-acetylglucosamine transferase (2.4.1 from EC). Structural analysis suggests the C-terminal domain contains the UDP-GlcNAc binding site.; GO: 0016758 transferase activity, transferring hexosyl groups, 0030246 carbohydrate binding, 0005975 carbohydrate metabolic process, 0030259 lipid glycosylation; PDB: 2KS6_A 2JZC_A 1NLM_B 1F0K_B.
Probab=91.41 E-value=0.11 Score=51.03 Aligned_cols=91 Identities=16% Similarity=0.195 Sum_probs=55.2
Q ss_pred CcEEEccCCCCcCChHHHHHHHHccCcEEEeCCCCCCCcHHHHHHHHcCCcEEEcCccc--------cccccccCceEEE
Q 003962 616 GQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGG--------PAEIIVNGKSGYH 687 (783)
Q Consensus 616 ~~V~flG~~~~~~~~~el~~~ia~aadvfV~PS~~E~fGltvlEAMa~GlPVVat~~GG--------~~EiI~dg~~G~l 687 (783)
.+|.+.++.. ++..+|+. +|+.|.- +=+.|+.|++++|+|.|.-...+ .+..+.....|..
T Consensus 55 ~~v~~~~~~~------~m~~~m~~-aDlvIs~----aG~~Ti~E~l~~g~P~I~ip~~~~~~~~q~~na~~~~~~g~~~~ 123 (167)
T PF04101_consen 55 PNVKVFGFVD------NMAELMAA-ADLVISH----AGAGTIAEALALGKPAIVIPLPGAADNHQEENAKELAKKGAAIM 123 (167)
T ss_dssp CCCEEECSSS------SHHHHHHH-HSEEEEC----S-CHHHHHHHHCT--EEEE--TTT-T-CHHHHHHHHHHCCCCCC
T ss_pred CcEEEEechh------hHHHHHHH-cCEEEeC----CCccHHHHHHHcCCCeeccCCCCcchHHHHHHHHHHHHcCCccc
Confidence 6899998543 36777774 9988874 23579999999999998865555 2222333333443
Q ss_pred ECCC--CHHHHHHHHHHHHHHhhCCHHHHHHHHHHH
Q 003962 688 IDPY--HGEQAAEILVDFFEKCKADPSYWDKISLGG 721 (783)
Q Consensus 688 i~p~--d~e~lAeaI~~~l~~l~~dp~~~~~ms~~a 721 (783)
+... +++.+.++| +.+..++....++++++
T Consensus 124 ~~~~~~~~~~L~~~i----~~l~~~~~~~~~~~~~~ 155 (167)
T PF04101_consen 124 LDESELNPEELAEAI----EELLSDPEKLKEMAKAA 155 (167)
T ss_dssp SECCC-SCCCHHHHH----HCHCCCHH-SHHHCCCH
T ss_pred cCcccCCHHHHHHHH----HHHHcCcHHHHHHHHHH
Confidence 3322 356778888 45558888777766654
No 168
>PLN03015 UDP-glucosyl transferase
Probab=91.32 E-value=34 Score=39.83 Aligned_cols=72 Identities=17% Similarity=0.116 Sum_probs=42.5
Q ss_pred cCChHHHHHHHHccCcEEEeCCCCCCCcHHHHHHHHcCCcEEEcCcc----cccccc-ccCceEEEEC------CCCHHH
Q 003962 627 RVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKG----GPAEII-VNGKSGYHID------PYHGEQ 695 (783)
Q Consensus 627 ~~~~~el~~~ia~aadvfV~PS~~E~fGltvlEAMa~GlPVVat~~G----G~~EiI-~dg~~G~li~------p~d~e~ 695 (783)
+++..++... .+.+.||.= +=-++++||+++|+|+|+-..- -.+..+ +.-..|.-+. .-..++
T Consensus 342 W~PQ~~vL~h--~~vg~fvtH----~GwnS~~Eai~~GvP~v~~P~~~DQ~~na~~~~~~~gvg~~~~~~~~~~~v~~e~ 415 (470)
T PLN03015 342 WAPQVEILSH--RSIGGFLSH----CGWSSVLESLTKGVPIVAWPLYAEQWMNATLLTEEIGVAVRTSELPSEKVIGREE 415 (470)
T ss_pred cCCHHHHhcc--CccCeEEec----CCchhHHHHHHcCCCEEecccccchHHHHHHHHHHhCeeEEecccccCCccCHHH
Confidence 6666666652 123345532 1234899999999999997432 233333 2334565552 125678
Q ss_pred HHHHHHHHH
Q 003962 696 AAEILVDFF 704 (783)
Q Consensus 696 lAeaI~~~l 704 (783)
++++|.+++
T Consensus 416 i~~~v~~lm 424 (470)
T PLN03015 416 VASLVRKIV 424 (470)
T ss_pred HHHHHHHHH
Confidence 888887666
No 169
>PF00201 UDPGT: UDP-glucoronosyl and UDP-glucosyl transferase; InterPro: IPR002213 UDP glycosyltransferases (UGT) are a superfamily of enzymes that catalyzes the addition of the glycosyl group from a UTP-sugar to a small hydrophobic molecule. This family currently consist of: Mammalian UDP-glucuronosyl transferases (2.4.1.17 from EC) (UDPGT) []. A large family of membrane-bound microsomal enzymes which catalyze the transfer of glucuronic acid to a wide variety of exogenous and endogenous lipophilic substrates. These enzymes are of major importance in the detoxification and subsequent elimination of xenobiotics such as drugs and carcinogens. A large number of putative UDPGT from Caenorhabditis elegans. Mammalian 2-hydroxyacylsphingosine 1-beta-galactosyltransferase [] (2.4.1.45 from EC) (also known as UDP-galactose-ceramide galactosyltransferase). This enzyme catalyzes the transfer of galactose to ceramide, a key enzymatic step in the biosynthesis of galactocerebrosides, which are abundant sphingolipids of the myelin membrane of the central nervous system and peripheral nervous system. Plants flavonol O(3)-glucosyltransferase (2.4.1.91 from EC). An enzyme [] that catalyzes the transfer of glucose from UDP-glucose to a flavanol. This reaction is essential and one of the last steps in anthocyanin pigment biosynthesis. Baculoviruses ecdysteroid UDP-glucosyltransferase (2.4.1 from EC) [] (egt). This enzyme catalyzes the transfer of glucose from UDP-glucose to ectysteroids which are insect molting hormones. The expression of egt in the insect host interferes with the normal insect development by blocking the molting process. Prokaryotic zeaxanthin glucosyltransferase (2.4.1 from EC) (gene crtX), an enzyme involved in carotenoid biosynthesis and that catalyses the glycosylation reaction which converts zeaxanthin to zeaxanthin-beta-diglucoside. Streptomyces macrolide glycosyltransferases (2.4.1 from EC) []. These enzymes specifically inactivates macrolide anitibiotics via 2'-O-glycosylation using UDP-glucose. These enzymes share a conserved domain of about 50 amino acid residues located in their C-terminal section.; GO: 0016758 transferase activity, transferring hexosyl groups, 0008152 metabolic process; PDB: 3HBJ_A 3HBF_A 2PQ6_A 3IA7_B 3RSC_A 3IAA_B 2IYA_A 2IYF_B 2O6L_A 2VCH_A ....
Probab=90.12 E-value=1.2 Score=51.84 Aligned_cols=135 Identities=10% Similarity=0.093 Sum_probs=74.1
Q ss_pred CCcEEEEEecccCCCCHHHHHHHHHHhHccCCCeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHHcCCCCcEEEccCCCC
Q 003962 547 NKPILFTMARLDRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMN 626 (783)
Q Consensus 547 ~k~iIl~vGRL~~~Kgl~~LieA~~~l~~~~~~~~LvIVG~g~~~~~~~~ee~~~~~~l~~li~~~~L~~~V~flG~~~~ 626 (783)
+..++++.|.+.. ......++++.+.-+..|+ ++++.-++... . .+++++....
T Consensus 276 ~~vv~vsfGs~~~-~~~~~~~~~~~~~~~~~~~-~~iW~~~~~~~-----------~---------~l~~n~~~~~---- 329 (500)
T PF00201_consen 276 KGVVYVSFGSIVS-SMPEEKLKEIAEAFENLPQ-RFIWKYEGEPP-----------E---------NLPKNVLIVK---- 329 (500)
T ss_dssp TEEEEEE-TSSST-T-HHHHHHHHHHHHHCSTT-EEEEEETCSHG-----------C---------HHHTTEEEES----
T ss_pred CCEEEEecCcccc-hhHHHHHHHHHHHHhhCCC-ccccccccccc-----------c---------cccceEEEec----
Confidence 4457888898753 2333323333333333355 66666555210 0 1235777776
Q ss_pred cCChHHHHHHHHc-cCcEEEeCCCCCCCcHHHHHHHHcCCcEEEcCc----cccccccccCceEEEECCC--CHHHHHHH
Q 003962 627 RVRNGELYRYICD-TKGAFVQPALYEAFGLTVVEAMTCGLPTFATCK----GGPAEIIVNGKSGYHIDPY--HGEQAAEI 699 (783)
Q Consensus 627 ~~~~~el~~~ia~-aadvfV~PS~~E~fGltvlEAMa~GlPVVat~~----GG~~EiI~dg~~G~li~p~--d~e~lAea 699 (783)
+++..++.. + ..++||. =|--.++.||+.+|+|+|+-.. ...+..+++-..|..++.. +.+++.++
T Consensus 330 W~PQ~~lL~---hp~v~~fit----HgG~~s~~Ea~~~gvP~l~~P~~~DQ~~na~~~~~~G~g~~l~~~~~~~~~l~~a 402 (500)
T PF00201_consen 330 WLPQNDLLA---HPRVKLFIT----HGGLNSTQEALYHGVPMLGIPLFGDQPRNAARVEEKGVGVVLDKNDLTEEELRAA 402 (500)
T ss_dssp S--HHHHHT---STTEEEEEE----S--HHHHHHHHHCT--EEE-GCSTTHHHHHHHHHHTTSEEEEGGGC-SHHHHHHH
T ss_pred cccchhhhh---cccceeeee----ccccchhhhhhhccCCccCCCCcccCCccceEEEEEeeEEEEEecCCcHHHHHHH
Confidence 777766653 2 2345553 2223589999999999999743 3445555555578888754 45778888
Q ss_pred HHHHHHHhhCCHHHHHHHH
Q 003962 700 LVDFFEKCKADPSYWDKIS 718 (783)
Q Consensus 700 I~~~l~~l~~dp~~~~~ms 718 (783)
|.+++ +|+++++...
T Consensus 403 i~~vl----~~~~y~~~a~ 417 (500)
T PF00201_consen 403 IREVL----ENPSYKENAK 417 (500)
T ss_dssp HHHHH----HSHHHHHHHH
T ss_pred HHHHH----hhhHHHHHHH
Confidence 86655 7887665433
No 170
>cd03789 GT1_LPS_heptosyltransferase Lipopolysaccharide heptosyltransferase is involved in the biosynthesis of lipooligosaccharide (LOS). Lipopolysaccharide (LPS) is a major component of the outer membrane of gram-negative bacteria. LPS heptosyltransferase transfers heptose molecules from ADP-heptose to 3-deoxy-D-manno-octulosonic acid (KDO), a part of the inner core component of LPS. This family belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=89.98 E-value=1.9 Score=46.03 Aligned_cols=98 Identities=13% Similarity=0.089 Sum_probs=63.8
Q ss_pred EEEEEecccCCCC--HHHHHHHHHHhHccCCCeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHHcCCCCcEEEccCCCCc
Q 003962 550 ILFTMARLDRVKN--LTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNR 627 (783)
Q Consensus 550 iIl~vGRL~~~Kg--l~~LieA~~~l~~~~~~~~LvIVG~g~~~~~~~~ee~~~~~~l~~li~~~~L~~~V~flG~~~~~ 627 (783)
+++..|.-.+.|. .+...+.+..+.+. +++++++|+..+ .+...++.+..+....+.+.| .
T Consensus 124 i~i~~~~~~~~k~w~~~~~~~l~~~l~~~--~~~ivl~g~~~e-----------~~~~~~i~~~~~~~~~~~~~~----~ 186 (279)
T cd03789 124 VVLPPGASGPAKRWPAERFAALADRLLAR--GARVVLTGGPAE-----------RELAEEIAAALGGPRVVNLAG----K 186 (279)
T ss_pred EEECCCCCCccccCCHHHHHHHHHHHHHC--CCEEEEEechhh-----------HHHHHHHHHhcCCCccccCcC----C
Confidence 4445554444443 45777777777764 788999987632 233344444443223355666 5
Q ss_pred CChHHHHHHHHccCcEEEeCCCCCCCcHHHHHHHHcCCcEEEc
Q 003962 628 VRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFAT 670 (783)
Q Consensus 628 ~~~~el~~~ia~aadvfV~PS~~E~fGltvlEAMa~GlPVVat 670 (783)
.+..|+..+++. +|++|.+-. | ++--|.+.|+|+|+-
T Consensus 187 ~~l~e~~~li~~-~~l~I~~Ds----g-~~HlA~a~~~p~i~l 223 (279)
T cd03789 187 TSLRELAALLAR-ADLVVTNDS----G-PMHLAAALGTPTVAL 223 (279)
T ss_pred CCHHHHHHHHHh-CCEEEeeCC----H-HHHHHHHcCCCEEEE
Confidence 678999999996 999998742 4 344456999999996
No 171
>PLN02764 glycosyltransferase family protein
Probab=88.59 E-value=54 Score=38.03 Aligned_cols=91 Identities=9% Similarity=0.039 Sum_probs=55.4
Q ss_pred EEEccCCCCcCChHHHHHHHHccCcEEEeCCCCCCCcHHHHHHHHcCCcEEEcCcc----cccccccc-CceEEEECC--
Q 003962 618 FRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKG----GPAEIIVN-GKSGYHIDP-- 690 (783)
Q Consensus 618 V~flG~~~~~~~~~el~~~ia~aadvfV~PS~~E~fGltvlEAMa~GlPVVat~~G----G~~EiI~d-g~~G~li~p-- 690 (783)
+...+ +++..++... . +.++||.= +=-++++||+.+|+|+|+-... ..+..+.+ -..|+.+.+
T Consensus 319 ~v~~~----W~PQ~~vL~h-~-~v~~FvtH----~G~nS~~Eal~~GVP~l~~P~~~DQ~~na~~l~~~~g~gv~~~~~~ 388 (453)
T PLN02764 319 VVWGG----WVQQPLILSH-P-SVGCFVSH----CGFGSMWESLLSDCQIVLVPQLGDQVLNTRLLSDELKVSVEVAREE 388 (453)
T ss_pred cEEeC----CCCHHHHhcC-c-ccCeEEec----CCchHHHHHHHcCCCEEeCCcccchHHHHHHHHHHhceEEEecccc
Confidence 45555 7777777662 1 24556652 2235899999999999997443 33445533 346666532
Q ss_pred ---CCHHHHHHHHHHHHHHhhCCH-HHHHHHHHHHH
Q 003962 691 ---YHGEQAAEILVDFFEKCKADP-SYWDKISLGGL 722 (783)
Q Consensus 691 ---~d~e~lAeaI~~~l~~l~~dp-~~~~~ms~~a~ 722 (783)
-+.+++++++.+++ .++ +..+++.+++.
T Consensus 389 ~~~~~~e~i~~av~~vm----~~~~~~g~~~r~~a~ 420 (453)
T PLN02764 389 TGWFSKESLRDAINSVM----KRDSEIGNLVKKNHT 420 (453)
T ss_pred CCccCHHHHHHHHHHHh----cCCchhHHHHHHHHH
Confidence 26788888887766 554 33444444443
No 172
>PLN03004 UDP-glycosyltransferase
Probab=87.72 E-value=7.2 Score=45.11 Aligned_cols=85 Identities=14% Similarity=0.128 Sum_probs=55.8
Q ss_pred CcEEEccCCCCcCChHHHHHHHHccCcE--EEeCCCCCCCcHHHHHHHHcCCcEEEc----Ccccccccccc-CceEEEE
Q 003962 616 GQFRWISSQMNRVRNGELYRYICDTKGA--FVQPALYEAFGLTVVEAMTCGLPTFAT----CKGGPAEIIVN-GKSGYHI 688 (783)
Q Consensus 616 ~~V~flG~~~~~~~~~el~~~ia~aadv--fV~PS~~E~fGltvlEAMa~GlPVVat----~~GG~~EiI~d-g~~G~li 688 (783)
.++...+ +++..++.. ..++ ||. -+=-++++||+++|+|+|+. +....+..+.+ -+.|..+
T Consensus 334 ~g~~v~~----W~PQ~~iL~----H~~v~~FvT----H~G~nS~lEal~~GVP~v~~P~~~DQ~~na~~~~~~~g~g~~l 401 (451)
T PLN03004 334 KGMVVKS----WAPQVPVLN----HKAVGGFVT----HCGWNSILEAVCAGVPMVAWPLYAEQRFNRVMIVDEIKIAISM 401 (451)
T ss_pred CcEEEEe----eCCHHHHhC----CCccceEec----cCcchHHHHHHHcCCCEEeccccccchhhHHHHHHHhCceEEe
Confidence 4677776 667777665 3665 553 12235899999999999996 34444555543 2578777
Q ss_pred CC-----CCHHHHHHHHHHHHHHhhCCHHHHHH
Q 003962 689 DP-----YHGEQAAEILVDFFEKCKADPSYWDK 716 (783)
Q Consensus 689 ~p-----~d~e~lAeaI~~~l~~l~~dp~~~~~ 716 (783)
+. -+.++++++|.+++ .|++++++
T Consensus 402 ~~~~~~~~~~e~l~~av~~vm----~~~~~r~~ 430 (451)
T PLN03004 402 NESETGFVSSTEVEKRVQEII----GECPVRER 430 (451)
T ss_pred cCCcCCccCHHHHHHHHHHHh----cCHHHHHH
Confidence 52 26788888887766 67654443
No 173
>COG2327 WcaK Polysaccharide pyruvyl transferase family protein [Cell wall/membrane/envelope biogenesis]
Probab=87.54 E-value=55 Score=36.96 Aligned_cols=88 Identities=17% Similarity=0.276 Sum_probs=55.2
Q ss_pred CcEEEccCCCCcCChHHHHHHHHccCcEEEeCCCCCCCcHHHHHHHHcCCcEEEcCcccc-cccccc-CceEE--EECCC
Q 003962 616 GQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGP-AEIIVN-GKSGY--HIDPY 691 (783)
Q Consensus 616 ~~V~flG~~~~~~~~~el~~~ia~aadvfV~PS~~E~fGltvlEAMa~GlPVVat~~GG~-~EiI~d-g~~G~--li~p~ 691 (783)
.++.+.. +. ...++...++. +|++|-.-+. +++=||+.|+|+|+-.+..= ..+.++ |..|+ .+.|.
T Consensus 266 ~~i~~~~---d~-~~~~~~~~l~~-~dl~Vg~R~H-----saI~al~~g~p~i~i~Y~~K~~~l~~~~gl~~~~~~i~~~ 335 (385)
T COG2327 266 AEILVSS---DE-YAEELGGILAA-CDLIVGMRLH-----SAIMALAFGVPAIAIAYDPKVRGLMQDLGLPGFAIDIDPL 335 (385)
T ss_pred cceEeec---ch-HHHHHHHHhcc-CceEEeehhH-----HHHHHHhcCCCeEEEeecHHHHHHHHHcCCCcccccCCCC
Confidence 6677764 12 23566668885 8888854432 57889999999999744322 222222 33344 35577
Q ss_pred CHHHHHHHHHHHHHHhhCCHHHHHH
Q 003962 692 HGEQAAEILVDFFEKCKADPSYWDK 716 (783)
Q Consensus 692 d~e~lAeaI~~~l~~l~~dp~~~~~ 716 (783)
|.+.+.+...+.+. .+++.+++
T Consensus 336 ~~~~l~~~~~e~~~---~~~~~~~~ 357 (385)
T COG2327 336 DAEILSAVVLERLT---KLDELRER 357 (385)
T ss_pred chHHHHHHHHHHHh---ccHHHHhh
Confidence 88888888887663 45554444
No 174
>TIGR03609 S_layer_CsaB polysaccharide pyruvyl transferase CsaB. The CsaB protein (cell surface anchoring B) of Bacillus anthracis adds a pyruvoyl group to peptidoglycan-associated polysaccharide. This addition is required for proteins with an S-layer homology domain (pfam00395) to bind. Within the larger group of proteins described by Pfam model pfam04230, this model represents a distinct clade that nearly exactly follows the phylogenetic distribution of the S-layer homology domain (pfam00395).
Probab=86.85 E-value=32 Score=37.11 Aligned_cols=86 Identities=16% Similarity=0.139 Sum_probs=53.2
Q ss_pred HHHHHHHHHHhHccCCCeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHHcCCCCcEEEccCCCCcCChHHHHHHHHccCc
Q 003962 563 LTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKG 642 (783)
Q Consensus 563 l~~LieA~~~l~~~~~~~~LvIVG~g~~~~~~~~ee~~~~~~l~~li~~~~L~~~V~flG~~~~~~~~~el~~~ia~aad 642 (783)
+..+++++..+.+.. +++++++.-... .| .+..+.+.+.+.-...+ +. ..+..|+...+++ ++
T Consensus 190 ~~~l~~~l~~l~~~~-g~~v~~i~~~~~---~D------~~~~~~l~~~~~~~~~i--~~----~~~~~e~~~~i~~-~~ 252 (298)
T TIGR03609 190 LLRLLRALDRLQRDT-GAFVLFLPFQQP---QD------LPLARALRDQLLGPAEV--LS----PLDPEELLGLFAS-AR 252 (298)
T ss_pred HHHHHHHHHHHHHhh-CCeEEEEeCCcc---hh------HHHHHHHHHhcCCCcEE--Ee----cCCHHHHHHHHhh-CC
Confidence 556777777765542 456666654321 11 12333444444322333 23 4567899999996 99
Q ss_pred EEEeCCCCCCCcHHHHHHHHcCCcEEEc
Q 003962 643 AFVQPALYEAFGLTVVEAMTCGLPTFAT 670 (783)
Q Consensus 643 vfV~PS~~E~fGltvlEAMa~GlPVVat 670 (783)
++|-..+. ..+=|+++|+|+++-
T Consensus 253 ~vI~~RlH-----~~I~A~~~gvP~i~i 275 (298)
T TIGR03609 253 LVIGMRLH-----ALILAAAAGVPFVAL 275 (298)
T ss_pred EEEEechH-----HHHHHHHcCCCEEEe
Confidence 88866553 578899999999975
No 175
>PF01075 Glyco_transf_9: Glycosyltransferase family 9 (heptosyltransferase); InterPro: IPR002201 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 9 GT9 from CAZY comprises enzymes with two known activity; lipopolysaccharide N-acetylglucosaminyltransferase (2.4.1.56 from EC), heptosyltransferase (2.4 from EC). Heptosyltransferase I is thought to add L-glycero-D-manno-heptose to the inner 3-deoxy-D-manno-octulosonic acid (Kdo) residue of the lipopolysaccharide core []. Heptosyltransferase II is a glycosyltransferase involved in the synthesis of the inner core region of lipopolysaccharide []. Lipopolysaccharide is a major component of the outer leaflet of the outer membrane in Gram-negative bacteria. It is composed of three domains; lipid A, Core oligosaccharide and the O-antigen. These enzymes transfer heptose to the lipopolysaccharide core [].; GO: 0016757 transferase activity, transferring glycosyl groups, 0008152 metabolic process; PDB: 1PSW_A 2H1F_A 2GT1_A 3TOV_A 2H1H_A.
Probab=86.82 E-value=6.6 Score=40.89 Aligned_cols=103 Identities=16% Similarity=0.081 Sum_probs=61.4
Q ss_pred CCCcEEEEEecccCCCCHHH--HHHHHHHhHccCCCeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHHcCCCCcEEEccC
Q 003962 546 RNKPILFTMARLDRVKNLTG--LVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISS 623 (783)
Q Consensus 546 ~~k~iIl~vGRL~~~Kgl~~--LieA~~~l~~~~~~~~LvIVG~g~~~~~~~~ee~~~~~~l~~li~~~~L~~~V~flG~ 623 (783)
+++.+++..|.-.+.|.... ..+.+..+.+.. ++++++|+..+ .+.+....+.+... ...+.+.|
T Consensus 104 ~~~~i~i~~~a~~~~k~wp~e~~~~l~~~l~~~~--~~vvl~g~~~~---------~~~~~~~~~~~~~~-~~~~~~~~- 170 (247)
T PF01075_consen 104 DKPYIGINPGASWPSKRWPAEKWAELIERLKERG--YRVVLLGGPEE---------QEKEIADQIAAGLQ-NPVINLAG- 170 (247)
T ss_dssp TSSEEEEE---SSGGGS--HHHHHHHHHHHCCCT---EEEE--SSHH---------HHHHHHHHHHTTHT-TTTEEETT-
T ss_pred cCCeEEEeecCCCccccCCHHHHHHHHHHHHhhC--ceEEEEccchH---------HHHHHHHHHHHhcc-cceEeecC-
Confidence 44556777777667776555 777777776643 78889898732 01222333333322 12678888
Q ss_pred CCCcCChHHHHHHHHccCcEEEeCCCCCCCcHHHHHHHHcCCcEEEc
Q 003962 624 QMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFAT 670 (783)
Q Consensus 624 ~~~~~~~~el~~~ia~aadvfV~PS~~E~fGltvlEAMa~GlPVVat 670 (783)
..+..++..+++. +|++|.+-. . .+-=|.|.|+|+|+-
T Consensus 171 ---~~~l~e~~ali~~-a~~~I~~Dt---g--~~HlA~a~~~p~v~l 208 (247)
T PF01075_consen 171 ---KTSLRELAALISR-ADLVIGNDT---G--PMHLAAALGTPTVAL 208 (247)
T ss_dssp ---TS-HHHHHHHHHT-SSEEEEESS---H--HHHHHHHTT--EEEE
T ss_pred ---CCCHHHHHHHHhc-CCEEEecCC---h--HHHHHHHHhCCEEEE
Confidence 6778999999996 999998732 2 466789999999996
No 176
>PRK10422 lipopolysaccharide core biosynthesis protein; Provisional
Probab=86.17 E-value=6.4 Score=43.70 Aligned_cols=103 Identities=9% Similarity=0.027 Sum_probs=66.1
Q ss_pred CCcEEEEEecccCCCCHH--HHHHHHHHhHccCCCeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHHcCCCCcEEEccCC
Q 003962 547 NKPILFTMARLDRVKNLT--GLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQ 624 (783)
Q Consensus 547 ~k~iIl~vGRL~~~Kgl~--~LieA~~~l~~~~~~~~LvIVG~g~~~~~~~~ee~~~~~~l~~li~~~~L~~~V~flG~~ 624 (783)
++.+++..|.-.+.|... ...+.+..+.+ .+.+++++|+..+ .+.+...++.+.......+.+.|
T Consensus 183 ~~~i~i~pga~~~~K~Wp~e~fa~l~~~L~~--~~~~vvl~ggp~e---------~e~~~~~~i~~~~~~~~~~~l~g-- 249 (352)
T PRK10422 183 QNYVVIQPTARQIFKCWDNDKFSAVIDALQA--RGYEVVLTSGPDK---------DDLACVNEIAQGCQTPPVTALAG-- 249 (352)
T ss_pred CCeEEEecCCCccccCCCHHHHHHHHHHHHH--CCCeEEEEcCCCh---------HHHHHHHHHHHhcCCCccccccC--
Confidence 345667777655667644 66677666654 3578888876532 11222333443332223355677
Q ss_pred CCcCChHHHHHHHHccCcEEEeCCCCCCCcHHHHHHHHcCCcEEEc
Q 003962 625 MNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFAT 670 (783)
Q Consensus 625 ~~~~~~~el~~~ia~aadvfV~PS~~E~fGltvlEAMa~GlPVVat 670 (783)
..+..|+..+++. ++++|..-. | .+-=|-|.|+|+|+-
T Consensus 250 --~~sL~el~ali~~-a~l~v~nDS----G-p~HlAaA~g~P~v~l 287 (352)
T PRK10422 250 --KTTFPELGALIDH-AQLFIGVDS----A-PAHIAAAVNTPLICL 287 (352)
T ss_pred --CCCHHHHHHHHHh-CCEEEecCC----H-HHHHHHHcCCCEEEE
Confidence 7788999999996 999997633 3 355577999999985
No 177
>TIGR02195 heptsyl_trn_II lipopolysaccharide heptosyltransferase II. This family consists of examples of ADP-heptose:LPS heptosyltransferase II, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria.
Probab=85.24 E-value=9 Score=42.02 Aligned_cols=102 Identities=16% Similarity=0.105 Sum_probs=64.2
Q ss_pred CCCCc-EEEEEec-ccCCCCHH--HHHHHHHHhHccCCCeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHHcCCCCcEEE
Q 003962 545 DRNKP-ILFTMAR-LDRVKNLT--GLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLNGQFRW 620 (783)
Q Consensus 545 ~~~k~-iIl~vGR-L~~~Kgl~--~LieA~~~l~~~~~~~~LvIVG~g~~~~~~~~ee~~~~~~l~~li~~~~L~~~V~f 620 (783)
+.+++ +++..|. ..+.|... ...+.+..+.+ .+.+++++|+..+ .+...++.+..+ ...+.+
T Consensus 171 ~~~~~~i~i~pga~~~~~K~Wp~e~~~~li~~l~~--~~~~ivl~G~~~e-----------~~~~~~i~~~~~-~~~~~l 236 (334)
T TIGR02195 171 DTERPIIAFCPGAEFGPAKRWPHEHYAELAKRLID--QGYQVVLFGSAKD-----------HPAGNEIEALLP-GELRNL 236 (334)
T ss_pred CCCCCEEEEcCCCCCCccCCCCHHHHHHHHHHHHH--CCCEEEEEEChhh-----------HHHHHHHHHhCC-cccccC
Confidence 33444 4556654 34666555 67777766654 2578899987633 122233333322 122346
Q ss_pred ccCCCCcCChHHHHHHHHccCcEEEeCCCCCCCcHHHHHHHHcCCcEEEc
Q 003962 621 ISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFAT 670 (783)
Q Consensus 621 lG~~~~~~~~~el~~~ia~aadvfV~PS~~E~fGltvlEAMa~GlPVVat 670 (783)
.| ..+..++..+++. +|++|..-. | .+-=|-|.|+|+|+-
T Consensus 237 ~g----~~sL~el~ali~~-a~l~I~~DS----G-p~HlAaA~~~P~i~l 276 (334)
T TIGR02195 237 AG----ETSLDEAVDLIAL-AKAVVTNDS----G-LMHVAAALNRPLVAL 276 (334)
T ss_pred CC----CCCHHHHHHHHHh-CCEEEeeCC----H-HHHHHHHcCCCEEEE
Confidence 67 6788999999996 999997633 3 355677999999984
No 178
>PLN02167 UDP-glycosyltransferase family protein
Probab=81.20 E-value=63 Score=37.65 Aligned_cols=79 Identities=14% Similarity=0.076 Sum_probs=48.6
Q ss_pred CcEEEccCCCCcCChHHHHHHHHccCcEEEeCCCCCCCcHHHHHHHHcCCcEEEcCcc----cccc-ccccCceEEEECC
Q 003962 616 GQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKG----GPAE-IIVNGKSGYHIDP 690 (783)
Q Consensus 616 ~~V~flG~~~~~~~~~el~~~ia~aadvfV~PS~~E~fGltvlEAMa~GlPVVat~~G----G~~E-iI~dg~~G~li~p 690 (783)
++....+ +++..++...= +.++||.= =|+ ++++||+++|+|+|+-... -.+. +++.-+.|+.+..
T Consensus 340 ~rg~v~~----w~PQ~~iL~h~--~vg~fvtH---~G~-nS~~Eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~~~~ 409 (475)
T PLN02167 340 GRGLVCG----WAPQVEILAHK--AIGGFVSH---CGW-NSVLESLWFGVPIATWPMYAEQQLNAFTMVKELGLAVELRL 409 (475)
T ss_pred cCeeeec----cCCHHHHhcCc--ccCeEEee---CCc-ccHHHHHHcCCCEEeccccccchhhHHHHHHHhCeeEEeec
Confidence 4455556 67777766521 24456642 223 3899999999999996433 2332 2434346776642
Q ss_pred ---------CCHHHHHHHHHHHH
Q 003962 691 ---------YHGEQAAEILVDFF 704 (783)
Q Consensus 691 ---------~d~e~lAeaI~~~l 704 (783)
-+.+++++++.+++
T Consensus 410 ~~~~~~~~~~~~~~l~~av~~~m 432 (475)
T PLN02167 410 DYVSAYGEIVKADEIAGAVRSLM 432 (475)
T ss_pred ccccccCCcccHHHHHHHHHHHh
Confidence 26788888887766
No 179
>PRK05562 precorrin-2 dehydrogenase; Provisional
Probab=80.84 E-value=63 Score=33.77 Aligned_cols=120 Identities=8% Similarity=-0.032 Sum_probs=61.9
Q ss_pred CcEEEeCCCCCCCcH-HHHHHHHcCCcEEEcCcccccccc-----ccCceEEEE-CCCCHHHHHHHHHHHHHHhhCCHHH
Q 003962 641 KGAFVQPALYEAFGL-TVVEAMTCGLPTFATCKGGPAEII-----VNGKSGYHI-DPYHGEQAAEILVDFFEKCKADPSY 713 (783)
Q Consensus 641 advfV~PS~~E~fGl-tvlEAMa~GlPVVat~~GG~~EiI-----~dg~~G~li-~p~d~e~lAeaI~~~l~~l~~dp~~ 713 (783)
+++.+..+-.+...- ..-+|.+.|.+|.+.+.....+++ ..|.--+-+ ..+..-.+|..|.+-++.++.+-+.
T Consensus 86 ~~LViaATdD~~vN~~I~~~a~~~~~lvn~vd~p~~~dFi~PAiv~rg~l~IaIST~G~sP~lar~lR~~ie~~l~~~~~ 165 (223)
T PRK05562 86 KHLIVIATDDEKLNNKIRKHCDRLYKLYIDCSDYKKGLCIIPYQRSTKNFVFALNTKGGSPKTSVFIGEKVKNFLKKYDD 165 (223)
T ss_pred CcEEEECCCCHHHHHHHHHHHHHcCCeEEEcCCcccCeEEeeeEEecCCEEEEEECCCcCcHHHHHHHHHHHHHHHHHHH
Confidence 544444433333333 345566779999887665544443 333222222 2234456777777766666644455
Q ss_pred HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHhcchhhhcchhHHHhhhHHHHHH
Q 003962 714 WDKISLGGLKRIEEKYTWKIYSQRLLTLTGVYGFWKHVSNLDRLESRRYLEMFY 767 (783)
Q Consensus 714 ~~~ms~~a~~~v~~~ysw~~~a~~ll~ly~~~~~w~~~~~~~~~~~~~~~~~~~ 767 (783)
+-+.....|+.++++ ..-+++++....-.+|+.+.+.. ...-|.|++
T Consensus 166 l~~~l~~~R~~vk~~----~~r~~i~~~l~~~~~~~~l~~~~---~~~~l~~~~ 212 (223)
T PRK05562 166 FIEYVTKIRNKAKKN----ELKDEIIEFICSDDFYFFYKKGK---ANLILSMFY 212 (223)
T ss_pred HHHHHHHHHHHHHhh----hHHHHHHHHHhChHHHHHHHcch---HHHHHHHhh
Confidence 556666677777554 23333333333334666663332 234455554
No 180
>TIGR02193 heptsyl_trn_I lipopolysaccharide heptosyltransferase I. This family consists of examples of ADP-heptose:LPS heptosyltransferase I, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria.
Probab=80.67 E-value=18 Score=39.29 Aligned_cols=99 Identities=13% Similarity=0.039 Sum_probs=64.8
Q ss_pred CCcEEEEEecccCCCCH--HHHHHHHHHhHccCCCeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHHcCCCCcEEEccCC
Q 003962 547 NKPILFTMARLDRVKNL--TGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQ 624 (783)
Q Consensus 547 ~k~iIl~vGRL~~~Kgl--~~LieA~~~l~~~~~~~~LvIVG~g~~~~~~~~ee~~~~~~l~~li~~~~L~~~V~flG~~ 624 (783)
++.+++..|.=.+.|.. +...+.+..+.+. +++++++|+++. +.+...++.+..+ +..+.|
T Consensus 179 ~~~i~i~~gas~~~K~wp~e~~~~l~~~l~~~--~~~~vl~~g~~~----------e~~~~~~i~~~~~---~~~l~g-- 241 (319)
T TIGR02193 179 APYAVLLHATSRDDKTWPEERWRELARLLLAR--GLQIVLPWGNDA----------EKQRAERIAEALP---GAVVLP-- 241 (319)
T ss_pred CCEEEEEeCCCcccCCCCHHHHHHHHHHHHHC--CCeEEEeCCCHH----------HHHHHHHHHhhCC---CCeecC--
Confidence 34456777754566665 4667777776542 678888866642 2233344444322 235667
Q ss_pred CCcCChHHHHHHHHccCcEEEeCCCCCCCcHHHHHHHHcCCcEEEc
Q 003962 625 MNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFAT 670 (783)
Q Consensus 625 ~~~~~~~el~~~ia~aadvfV~PS~~E~fGltvlEAMa~GlPVVat 670 (783)
..+..++..+++. ++++|..-. | .+-=|-|.|+|+|+-
T Consensus 242 --~~sL~el~ali~~-a~l~I~~DS----g-p~HlAaa~g~P~i~l 279 (319)
T TIGR02193 242 --KMSLAEVAALLAG-ADAVVGVDT----G-LTHLAAALDKPTVTL 279 (319)
T ss_pred --CCCHHHHHHHHHc-CCEEEeCCC----h-HHHHHHHcCCCEEEE
Confidence 6788999999996 999998633 2 355577899999985
No 181
>PF11997 DUF3492: Domain of unknown function (DUF3492); InterPro: IPR022622 This domain is functionally uncharacterised and is found in bacteria, archaea and eukaryotes. It is typically between 259 to 282 amino acids in length. This region is found N-terminal PF00534 from PFAM. There are two conserved sequence motifs: GGVS and EHGIY.
Probab=79.55 E-value=3.2 Score=44.63 Aligned_cols=79 Identities=11% Similarity=0.032 Sum_probs=48.2
Q ss_pred CCceEEEEcCCC-chHHHHHHHHhcCCcEEEEecCCCccCC-C-CCchhhh---hccccccccchhhHhHHhhhcCCEEE
Q 003962 382 GKPDLIIGNYSD-GNIVASLLAHKLGVTQCTIAHALEKTKY-P-DSDIYWK---NLDDKYHFSCQFTADLIAMNHTDFII 455 (783)
Q Consensus 382 ~~pDIIh~h~~~-~~lva~llar~lgvp~v~t~H~l~~~~~-~-~s~~~~~---~~~~~y~f~~~~~~e~~a~~~AD~II 455 (783)
.+.||.|+.... ++++|++++.+.|+|+++|-|+...... . -....|. ..............-+.++..||.|+
T Consensus 171 P~advyHsvstGyAgl~g~~~k~~~g~P~lLTEHGIY~RER~~ei~~a~w~~~~~~~r~~wi~~f~~l~~~~Y~~Ad~I~ 250 (268)
T PF11997_consen 171 PKADVYHSVSTGYAGLLGALAKYRYGRPFLLTEHGIYTREREIEILQADWIWESPYVRDLWIRFFESLSRLAYRAADRIT 250 (268)
T ss_pred CCCCEEecCCccHHHHHHHHHHHHhCCCEEEecCCccHHHHHHHHHhcccccchHHHHHHHHHHHHHHHHHHHHhhCeec
Confidence 467999987765 4889999999999999999999622110 0 0011111 00000000001123456899999999
Q ss_pred cCCHH
Q 003962 456 TSTFQ 460 (783)
Q Consensus 456 t~S~~ 460 (783)
+.++.
T Consensus 251 ~l~~~ 255 (268)
T PF11997_consen 251 PLYEY 255 (268)
T ss_pred ccchh
Confidence 99864
No 182
>TIGR02201 heptsyl_trn_III lipopolysaccharide heptosyltransferase III, putative. This family consists of examples of the putative ADP-heptose:LPS heptosyltransferase III, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria. This enzyme may be less widely distributed than heptosyltransferases I and II.
Probab=78.95 E-value=16 Score=40.36 Aligned_cols=102 Identities=12% Similarity=0.041 Sum_probs=63.7
Q ss_pred CcEEEEEecccCCCCH--HHHHHHHHHhHccCCCeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHHcCCCCcEEEccCCC
Q 003962 548 KPILFTMARLDRVKNL--TGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQM 625 (783)
Q Consensus 548 k~iIl~vGRL~~~Kgl--~~LieA~~~l~~~~~~~~LvIVG~g~~~~~~~~ee~~~~~~l~~li~~~~L~~~V~flG~~~ 625 (783)
+.+++..|.-.+.|.. +...+.+..+.+ .+.+++++|+..+ .+.+..+++.+..+...-+.+.|
T Consensus 182 ~~i~i~p~a~~~~K~Wp~e~~~~l~~~l~~--~~~~ivl~g~p~~---------~e~~~~~~i~~~~~~~~~~~l~g--- 247 (344)
T TIGR02201 182 NYIVIQPTSRWFFKCWDNDRFSALIDALHA--RGYEVVLTSGPDK---------DELAMVNEIAQGCQTPRVTSLAG--- 247 (344)
T ss_pred CEEEEeCCCCccccCCCHHHHHHHHHHHHh--CCCeEEEecCCCH---------HHHHHHHHHHhhCCCCcccccCC---
Confidence 3455666654455544 455666666654 3578899986532 11222233333333222344677
Q ss_pred CcCChHHHHHHHHccCcEEEeCCCCCCCcHHHHHHHHcCCcEEEc
Q 003962 626 NRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFAT 670 (783)
Q Consensus 626 ~~~~~~el~~~ia~aadvfV~PS~~E~fGltvlEAMa~GlPVVat 670 (783)
..+..|+..+++. ++++|-.-. | .+-=|-|.|+|+|+-
T Consensus 248 -~~sL~el~ali~~-a~l~Vs~DS----G-p~HlAaA~g~p~v~L 285 (344)
T TIGR02201 248 -KLTLPQLAALIDH-ARLFIGVDS----V-PMHMAAALGTPLVAL 285 (344)
T ss_pred -CCCHHHHHHHHHh-CCEEEecCC----H-HHHHHHHcCCCEEEE
Confidence 7788999999996 999998632 2 466688999999985
No 183
>PF10087 DUF2325: Uncharacterized protein conserved in bacteria (DUF2325); InterPro: IPR016772 There is currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=78.91 E-value=4.5 Score=36.24 Aligned_cols=84 Identities=13% Similarity=0.176 Sum_probs=57.0
Q ss_pred EEEEeCCCCCCCccHHHHHHHHHHHHHHHHcCCCCcEEEccCCCCcCChHH--HHHHHHccCcEEEeCCCCCCCc---HH
Q 003962 582 LVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGE--LYRYICDTKGAFVQPALYEAFG---LT 656 (783)
Q Consensus 582 LvIVG~g~~~~~~~~ee~~~~~~l~~li~~~~L~~~V~flG~~~~~~~~~e--l~~~ia~aadvfV~PS~~E~fG---lt 656 (783)
++|||+-.+ ....+++.++++|. ...++|... .....+ +...+.+ +|+.|++.-+=+.. .+
T Consensus 2 vliVGG~~~----------~~~~~~~~~~~~G~--~~~~hg~~~-~~~~~~~~l~~~i~~-aD~VIv~t~~vsH~~~~~v 67 (97)
T PF10087_consen 2 VLIVGGRED----------RERRYKRILEKYGG--KLIHHGRDG-GDEKKASRLPSKIKK-ADLVIVFTDYVSHNAMWKV 67 (97)
T ss_pred EEEEcCCcc----------cHHHHHHHHHHcCC--EEEEEecCC-CCccchhHHHHhcCC-CCEEEEEeCCcChHHHHHH
Confidence 678888433 24778889999885 455554333 233334 8888885 99999987654433 44
Q ss_pred HHHHHHcCCcEEEcCcccccccc
Q 003962 657 VVEAMTCGLPTFATCKGGPAEII 679 (783)
Q Consensus 657 vlEAMa~GlPVVat~~GG~~EiI 679 (783)
--+|-..|+|++.++..|...+.
T Consensus 68 k~~akk~~ip~~~~~~~~~~~l~ 90 (97)
T PF10087_consen 68 KKAAKKYGIPIIYSRSRGVSSLE 90 (97)
T ss_pred HHHHHHcCCcEEEECCCCHHHHH
Confidence 57778889999999866665543
No 184
>KOG4626 consensus O-linked N-acetylglucosamine transferase OGT [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms]
Probab=78.30 E-value=28 Score=41.17 Aligned_cols=194 Identities=14% Similarity=0.107 Sum_probs=122.8
Q ss_pred hhhccccCCCCcEEEEEecccCCCCHHHHHHHHHHhHccCCCeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHHcCCC-C
Q 003962 538 EHLCVLKDRNKPILFTMARLDRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLN-G 616 (783)
Q Consensus 538 ~~~gll~~~~k~iIl~vGRL~~~Kgl~~LieA~~~l~~~~~~~~LvIVG~g~~~~~~~~ee~~~~~~l~~li~~~~L~-~ 616 (783)
..+|+ +++..++...-.|- |=-...++.+.++.+.-|+..|++.--..- ..+.++..+.+.|++ +
T Consensus 751 ~~y~L--p~d~vvf~~FNqLy--KidP~~l~~W~~ILk~VPnS~LwllrfPa~----------ge~rf~ty~~~~Gl~p~ 816 (966)
T KOG4626|consen 751 SQYGL--PEDAVVFCNFNQLY--KIDPSTLQMWANILKRVPNSVLWLLRFPAV----------GEQRFRTYAEQLGLEPD 816 (966)
T ss_pred CCCCC--CCCeEEEeechhhh--cCCHHHHHHHHHHHHhCCcceeEEEecccc----------chHHHHHHHHHhCCCcc
Confidence 44676 56665555555443 334567788888877789888887654321 126788889999996 6
Q ss_pred cEEEccCCCCcCChHHHHHHHHccCcEEEeCCCCCCCcHHHHHHHHcCCcEEEcCcccccccc-----ccCceEEEECCC
Q 003962 617 QFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEII-----VNGKSGYHIDPY 691 (783)
Q Consensus 617 ~V~flG~~~~~~~~~el~~~ia~aadvfV~PS~~E~fGltvlEAMa~GlPVVat~~GG~~EiI-----~dg~~G~li~p~ 691 (783)
+|.|.. -...+|=.+-.. -+||.+-+-++-|.- |-.|.+-+|+|+|.-.-.-.+.-| .--..|-++. .
T Consensus 817 riifs~----va~k~eHvrr~~-LaDv~LDTplcnGhT-Tg~dvLw~GvPmVTmpge~lAsrVa~Sll~~~Gl~hlia-k 889 (966)
T KOG4626|consen 817 RIIFSP----VAAKEEHVRRGQ-LADVCLDTPLCNGHT-TGMDVLWAGVPMVTMPGETLASRVAASLLTALGLGHLIA-K 889 (966)
T ss_pred ceeecc----ccchHHHHHhhh-hhhhcccCcCcCCcc-cchhhhccCCceeecccHHHHHHHHHHHHHHcccHHHHh-h
Confidence 888886 333455555555 478888776655533 567889999999975322111111 1111333342 3
Q ss_pred CHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHH--HhCCHHHHHHHHHHHHHHhcchhhhcchhHHH
Q 003962 692 HGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIE--EKYTWKIYSQRLLTLTGVYGFWKHVSNLDRLE 758 (783)
Q Consensus 692 d~e~lAeaI~~~l~~l~~dp~~~~~ms~~a~~~v~--~~ysw~~~a~~ll~ly~~~~~w~~~~~~~~~~ 758 (783)
+-++..+.-.+ +..|.+..+++...-+..-. .-|+-..++..++++|.. .|+.-.+-+.-+
T Consensus 890 ~~eEY~~iaV~----Latd~~~L~~lr~~l~~~r~~splfd~~q~~~~LE~~y~~--MW~~y~~G~~p~ 952 (966)
T KOG4626|consen 890 NREEYVQIAVR----LATDKEYLKKLRAKLRKARASSPLFDTKQYAKGLERLYLQ--MWKKYCSGEVPD 952 (966)
T ss_pred hHHHHHHHHHH----hhcCHHHHHHHHHHHHHHhcCCCccCchHHHHHHHHHHHH--HHHHhccCCCCc
Confidence 66776666544 44888888887776554432 249999999999999865 787755544433
No 185
>PF08660 Alg14: Oligosaccharide biosynthesis protein Alg14 like; InterPro: IPR013969 Alg14 is involved dolichol-linked oligosaccharide biosynthesis and anchors the catalytic subunit Alg13 to the ER membrane [].
Probab=76.88 E-value=13 Score=37.01 Aligned_cols=63 Identities=19% Similarity=0.145 Sum_probs=43.3
Q ss_pred CCceEEEEcCCCchHHHHHHHHhc------CCcEEEEecCCCccCCCCCchhhhhccccccccchhhHhHHhhhcCCEEE
Q 003962 382 GKPDLIIGNYSDGNIVASLLAHKL------GVTQCTIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFII 455 (783)
Q Consensus 382 ~~pDIIh~h~~~~~lva~llar~l------gvp~v~t~H~l~~~~~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~AD~II 455 (783)
.+||+|++|.+..+....++++.+ |.++|++--- .. +...-..-++.+.-||..+
T Consensus 91 ~rPdvii~nGpg~~vp~~~~~~l~~~~~~~~~kiIyIES~-aR------------------v~~lSlTGklly~~aD~f~ 151 (170)
T PF08660_consen 91 ERPDVIISNGPGTCVPVCLAAKLLRLLGLRGSKIIYIESF-AR------------------VKTLSLTGKLLYPFADRFI 151 (170)
T ss_pred hCCCEEEEcCCceeeHHHHHHHHHHHhhccCCcEEEEEee-ee------------------cCCCchHHHHHHHhCCEEE
Confidence 479999999998888888888888 8887764221 00 0000112345677899999
Q ss_pred cCCHHHHh
Q 003962 456 TSTFQEIA 463 (783)
Q Consensus 456 t~S~~~~~ 463 (783)
+-.++.++
T Consensus 152 VQW~~l~~ 159 (170)
T PF08660_consen 152 VQWEELAE 159 (170)
T ss_pred EcCHHHHh
Confidence 99988766
No 186
>PF06925 MGDG_synth: Monogalactosyldiacylglycerol (MGDG) synthase; InterPro: IPR009695 This entry represents a conserved region of approximately 180 residues found towirds the N terminus of a number of plant and bacterial diacylglycerol glucosyltransferases, such as monogalactosyldiacylglycerol synthase [].; GO: 0016758 transferase activity, transferring hexosyl groups, 0009247 glycolipid biosynthetic process
Probab=76.59 E-value=15 Score=36.33 Aligned_cols=61 Identities=18% Similarity=0.138 Sum_probs=36.3
Q ss_pred CCceEEEEcCCCchHH-HH-HHHHh-c-CCcEEEEecCCCccCCCCCchhhhhccccccccchhhHhHHhhhcCCEEEcC
Q 003962 382 GKPDLIIGNYSDGNIV-AS-LLAHK-L-GVTQCTIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITS 457 (783)
Q Consensus 382 ~~pDIIh~h~~~~~lv-a~-llar~-l-gvp~v~t~H~l~~~~~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt~ 457 (783)
.+||+|+|.++..+.+ .. +.++. . ++|+++.+-++.... .. +.-..+|..++.
T Consensus 88 ~~PD~IIsThp~~~~~~l~~lk~~~~~~~~p~~tvvTD~~~~H-----~~------------------W~~~~~D~y~Va 144 (169)
T PF06925_consen 88 FQPDLIISTHPFPAQVPLSRLKRRGRLPNIPVVTVVTDFDTVH-----PF------------------WIHPGVDRYFVA 144 (169)
T ss_pred cCCCEEEECCcchhhhHHHHHHHhhcccCCcEEEEEcCCCCCC-----cC------------------eecCCCCEEEEC
Confidence 5799999988876433 33 33333 3 477654444331100 01 234588999999
Q ss_pred CHHHHhhc
Q 003962 458 TFQEIAGS 465 (783)
Q Consensus 458 S~~~~~~~ 465 (783)
|+..++.+
T Consensus 145 se~~~~~l 152 (169)
T PF06925_consen 145 SEEVKEEL 152 (169)
T ss_pred CHHHHHHH
Confidence 99887743
No 187
>PRK10964 ADP-heptose:LPS heptosyl transferase I; Provisional
Probab=76.32 E-value=24 Score=38.48 Aligned_cols=96 Identities=15% Similarity=0.110 Sum_probs=61.2
Q ss_pred EEEEEecccCCCCHH--HHHHHHHHhHccCCCeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHHcCCCCcEEEccCCCCc
Q 003962 550 ILFTMARLDRVKNLT--GLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNR 627 (783)
Q Consensus 550 iIl~vGRL~~~Kgl~--~LieA~~~l~~~~~~~~LvIVG~g~~~~~~~~ee~~~~~~l~~li~~~~L~~~V~flG~~~~~ 627 (783)
+++..|.-...|... ...+.+..+.+ .+.++++.|+++. +.+...++.+. ...+.+.| .
T Consensus 181 i~~~~~~s~~~k~Wp~e~~a~li~~l~~--~~~~ivl~~G~~~----------e~~~~~~i~~~---~~~~~l~g----~ 241 (322)
T PRK10964 181 LVFLHATTRDDKHWPEAHWRELIGLLAP--SGLRIKLPWGAEH----------EEQRAKRLAEG---FPYVEVLP----K 241 (322)
T ss_pred EEEEeCCCcccccCCHHHHHHHHHHHHH--CCCeEEEeCCCHH----------HHHHHHHHHcc---CCcceecC----C
Confidence 334445433455444 67777777654 2567777654532 22333333332 23466777 6
Q ss_pred CChHHHHHHHHccCcEEEeCCCCCCCcHHHHHHHHcCCcEEEc
Q 003962 628 VRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFAT 670 (783)
Q Consensus 628 ~~~~el~~~ia~aadvfV~PS~~E~fGltvlEAMa~GlPVVat 670 (783)
.+..|+..+++. +|++|..-. | .+-=|-|+|+|+|+-
T Consensus 242 ~sL~elaali~~-a~l~I~nDS----G-p~HlA~A~g~p~val 278 (322)
T PRK10964 242 LSLEQVARVLAG-AKAVVSVDT----G-LSHLTAALDRPNITL 278 (322)
T ss_pred CCHHHHHHHHHh-CCEEEecCC----c-HHHHHHHhCCCEEEE
Confidence 788999999996 999998643 3 466788999999995
No 188
>COG0859 RfaF ADP-heptose:LPS heptosyltransferase [Cell envelope biogenesis, outer membrane]
Probab=76.30 E-value=23 Score=39.07 Aligned_cols=98 Identities=16% Similarity=0.130 Sum_probs=68.7
Q ss_pred CcEEEEEe-cccCCCCHH--HHHHHHHHhHccCCCeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHHcCCCCcEEEccCC
Q 003962 548 KPILFTMA-RLDRVKNLT--GLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQ 624 (783)
Q Consensus 548 k~iIl~vG-RL~~~Kgl~--~LieA~~~l~~~~~~~~LvIVG~g~~~~~~~~ee~~~~~~l~~li~~~~L~~~V~flG~~ 624 (783)
+.+++..| +-...|+.. ...+.+..+.+.. .++++.|+. + +.+...++.+.+. +.+.+.|
T Consensus 176 ~~i~i~pg~s~~~~K~wp~e~~~~l~~~l~~~~--~~Vvl~g~~-~----------e~e~~~~i~~~~~--~~~~l~~-- 238 (334)
T COG0859 176 PYIVINPGASRGSAKRWPLEHYAELAELLIAKG--YQVVLFGGP-D----------EEERAEEIAKGLP--NAVILAG-- 238 (334)
T ss_pred CeEEEeccccccccCCCCHHHHHHHHHHHHHCC--CEEEEecCh-H----------HHHHHHHHHHhcC--CccccCC--
Confidence 45677777 555677655 6777777777654 789999988 2 2344455555543 2333677
Q ss_pred CCcCChHHHHHHHHccCcEEEeCCCCCCCcHHHHHHHHcCCcEEEc
Q 003962 625 MNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFAT 670 (783)
Q Consensus 625 ~~~~~~~el~~~ia~aadvfV~PS~~E~fGltvlEAMa~GlPVVat 670 (783)
..+..++..+++. ||++|.+.. | .+-=|-|.|+|+|+-
T Consensus 239 --k~sL~e~~~li~~-a~l~I~~DS----g-~~HlAaA~~~P~I~i 276 (334)
T COG0859 239 --KTSLEELAALIAG-ADLVIGNDS----G-PMHLAAALGTPTIAL 276 (334)
T ss_pred --CCCHHHHHHHHhc-CCEEEccCC----h-HHHHHHHcCCCEEEE
Confidence 7888999999996 999998744 3 355588999999996
No 189
>PLN00164 glucosyltransferase; Provisional
Probab=76.08 E-value=38 Score=39.53 Aligned_cols=92 Identities=12% Similarity=0.106 Sum_probs=52.7
Q ss_pred EEEccCCCCcCChHHHHHHHHccCcEEEeCCCCCCCcHHHHHHHHcCCcEEEcC----cccccccc-ccCceEEEECC--
Q 003962 618 FRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATC----KGGPAEII-VNGKSGYHIDP-- 690 (783)
Q Consensus 618 V~flG~~~~~~~~~el~~~ia~aadvfV~PS~~E~fGltvlEAMa~GlPVVat~----~GG~~EiI-~dg~~G~li~p-- 690 (783)
+...+ +++..++... . +.++||.= =|+ ++++||+++|+|+|+-. ..-.+..+ +.-..|+.++.
T Consensus 341 ~~v~~----w~PQ~~iL~h-~-~vg~fvtH---~Gw-nS~~Eai~~GVP~l~~P~~~DQ~~Na~~~~~~~gvG~~~~~~~ 410 (480)
T PLN00164 341 LVWPT----WAPQKEILAH-A-AVGGFVTH---CGW-NSVLESLWHGVPMAPWPLYAEQHLNAFELVADMGVAVAMKVDR 410 (480)
T ss_pred eEEee----cCCHHHHhcC-c-ccCeEEee---ccc-chHHHHHHcCCCEEeCCccccchhHHHHHHHHhCeEEEecccc
Confidence 55555 6666666552 0 12245532 222 48999999999999963 33344334 33356776642
Q ss_pred -----CCHHHHHHHHHHHHHHhhCCHH-HHHHHHHHHHH
Q 003962 691 -----YHGEQAAEILVDFFEKCKADPS-YWDKISLGGLK 723 (783)
Q Consensus 691 -----~d~e~lAeaI~~~l~~l~~dp~-~~~~ms~~a~~ 723 (783)
-+.++++++|.+++ .+++ ..+++.+++.+
T Consensus 411 ~~~~~~~~e~l~~av~~vm----~~~~~~~~~~r~~a~~ 445 (480)
T PLN00164 411 KRDNFVEAAELERAVRSLM----GGGEEEGRKAREKAAE 445 (480)
T ss_pred ccCCcCcHHHHHHHHHHHh----cCCchhHHHHHHHHHH
Confidence 25788888887666 5543 24444444433
No 190
>PF01975 SurE: Survival protein SurE; InterPro: IPR002828 This entry represents a SurE-like structural domain with a 3-layer alpha/bete/alpha topology that bears some topological similarity to the N-terminal domain of the glutaminase/asparaginase family. This domain is found in the stationary phase survival protein SurE, a metal ion-dependent phosphatase found in eubacteria, archaea and eukaryotes. In Escherichia coli, SurE also has activity as a nucleotidase and exopolyphosphatase, and may be involved in the stress response []. E. coli cells with mutations in the surE gene survive poorly in stationary phase []. The structure of SurE homologues have been determined from Thermotoga maritima [] and the archaea Pyrobaculum aerophilum []. The T. maritima SurE homologue has phosphatase activity that is inhibited by vanadate or tungstate, both of which bind adjacent to the divalent metal ion. This domain is found in acid phosphatases (3.1.3.2 from EC), 5'-nucleotidases (3.1.3.5 from EC), 3'-nucleotidases (3.1.3.6 from EC) and exopolyphosphatases (3.6.1.11 from EC).; GO: 0016787 hydrolase activity; PDB: 1L5X_B 2V4O_D 2V4N_A 2WQK_B 2E6G_G 2E69_D 2E6C_C 2E6B_D 2E6E_A 2E6H_A ....
Probab=75.45 E-value=27 Score=35.70 Aligned_cols=38 Identities=13% Similarity=0.178 Sum_probs=26.1
Q ss_pred ceEEEEcccccccccCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHHCCCceeeceeEEeCCCC
Q 003962 255 FNVVILTPHGYFAQDDVLGYPDTGGQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRLLP 318 (783)
Q Consensus 255 ~rI~iis~h~~~~~~~~lg~p~tGG~~vyv~d~araL~~eLa~~L~~~GheV~~~i~VvT~~~~ 318 (783)
|||++....|+-. ..+. .|++.|++.||+|. |+++...
T Consensus 1 M~ILlTNDDGi~a--------------~Gi~--------aL~~~L~~~g~~V~----VvAP~~~ 38 (196)
T PF01975_consen 1 MRILLTNDDGIDA--------------PGIR--------ALAKALSALGHDVV----VVAPDSE 38 (196)
T ss_dssp SEEEEE-SS-TTS--------------HHHH--------HHHHHHTTTSSEEE----EEEESSS
T ss_pred CeEEEEcCCCCCC--------------HHHH--------HHHHHHHhcCCeEE----EEeCCCC
Confidence 8999999988822 2244 55667777789999 9987644
No 191
>PLN02534 UDP-glycosyltransferase
Probab=75.16 E-value=1.8e+02 Score=34.23 Aligned_cols=77 Identities=9% Similarity=0.090 Sum_probs=46.1
Q ss_pred CcEEEccCCCCcCChHHHHHHHHccCcE--EEeCCCCCCCcHHHHHHHHcCCcEEEcCccc----ccccccc-CceEEEE
Q 003962 616 GQFRWISSQMNRVRNGELYRYICDTKGA--FVQPALYEAFGLTVVEAMTCGLPTFATCKGG----PAEIIVN-GKSGYHI 688 (783)
Q Consensus 616 ~~V~flG~~~~~~~~~el~~~ia~aadv--fV~PS~~E~fGltvlEAMa~GlPVVat~~GG----~~EiI~d-g~~G~li 688 (783)
.++.+.| +++..++.. ..++ ||.- +=.++++||+.+|+|+|+-...+ .+..+.+ =+.|+-+
T Consensus 344 ~g~~v~~----w~pq~~iL~----h~~v~~fvtH----~G~ns~~ea~~~GvP~v~~P~~~dq~~na~~~~e~~~vGv~~ 411 (491)
T PLN02534 344 RGLLIKG----WAPQVLILS----HPAIGGFLTH----CGWNSTIEGICSGVPMITWPLFAEQFLNEKLIVEVLRIGVRV 411 (491)
T ss_pred CCeeccC----CCCHHHHhc----CCccceEEec----CccHHHHHHHHcCCCEEeccccccHHHHHHHHHHhhcceEEe
Confidence 4566666 666666665 3444 5542 33468999999999999974432 2222221 1233322
Q ss_pred C---------------CCCHHHHHHHHHHHH
Q 003962 689 D---------------PYHGEQAAEILVDFF 704 (783)
Q Consensus 689 ~---------------p~d~e~lAeaI~~~l 704 (783)
. --+.+++++++.+++
T Consensus 412 ~~~~~~~~~~~~~~~~~v~~eev~~~v~~~m 442 (491)
T PLN02534 412 GVEVPVRWGDEERVGVLVKKDEVEKAVKTLM 442 (491)
T ss_pred cccccccccccccccCccCHHHHHHHHHHHh
Confidence 1 025788889987776
No 192
>PRK10916 ADP-heptose:LPS heptosyltransferase II; Provisional
Probab=70.31 E-value=37 Score=37.48 Aligned_cols=100 Identities=14% Similarity=0.049 Sum_probs=62.0
Q ss_pred CcEEEEEecc-cCCCCHH--HHHHHHHHhHccCCCeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHHcCCC--Cc-EEEc
Q 003962 548 KPILFTMARL-DRVKNLT--GLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLN--GQ-FRWI 621 (783)
Q Consensus 548 k~iIl~vGRL-~~~Kgl~--~LieA~~~l~~~~~~~~LvIVG~g~~~~~~~~ee~~~~~~l~~li~~~~L~--~~-V~fl 621 (783)
+.+++..|.- .+.|... ...+.+..+.+ .+++++++|+..+ .+...++.+...-. .+ +.+.
T Consensus 181 ~~i~i~pga~~~~~K~Wp~e~~a~l~~~l~~--~~~~vvl~Gg~~e-----------~~~~~~i~~~~~~~~~~~~~~l~ 247 (348)
T PRK10916 181 PIIGFCPGAEFGPAKRWPHYHYAELAQQLID--EGYQVVLFGSAKD-----------HEAGNEILAALNTEQQAWCRNLA 247 (348)
T ss_pred CEEEEeCCCCCccccCCCHHHHHHHHHHHHH--CCCeEEEEeCHHh-----------HHHHHHHHHhcccccccceeecc
Confidence 3455666653 3556543 55666666653 3678888887632 22233333333211 12 4556
Q ss_pred cCCCCcCChHHHHHHHHccCcEEEeCCCCCCCcHHHHHHHHcCCcEEEc
Q 003962 622 SSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFAT 670 (783)
Q Consensus 622 G~~~~~~~~~el~~~ia~aadvfV~PS~~E~fGltvlEAMa~GlPVVat 670 (783)
| ..+..++..+++. ++++|..-. | .+-=|-|.|+|+|+-
T Consensus 248 g----~~sL~el~ali~~-a~l~I~nDT----G-p~HlAaA~g~P~val 286 (348)
T PRK10916 248 G----ETQLEQAVILIAA-CKAIVTNDS----G-LMHVAAALNRPLVAL 286 (348)
T ss_pred C----CCCHHHHHHHHHh-CCEEEecCC----h-HHHHHHHhCCCEEEE
Confidence 6 6778999999996 999997633 3 456688999999984
No 193
>PF03401 TctC: Tripartite tricarboxylate transporter family receptor; InterPro: IPR005064 Bordetella pertussis, the causative agent of human whooping cough (pertussis), is an obligate human pathogen with diverse high-affinity transport systems for the assimilation of iron, a biometal that is essential for growth []. Periplasmic binding proteins of a new family, particularly well represented in this organism (and more generally in beta-proteobacteria), have been called Bug receptors []. They adopt a characteristic Venus flytrap fold with two globular domains bisected by a ligand-binding cleft. The family is specific for carboxylated solutes, with a characteristic mode of binding involving two highly conserved beta strand-beta turn-alpha helix motifs originating from each domain. These two motifs form hydrogen bonds with a carboxylate group of the ligand, both directly and via conserved water molecules, and have thus been termed the carboxylate pincers. Domain 1 recognises the ligand and the carboxylate group serves as an initial anchoring point. Domain 2 discriminates between productively and non-productively bound ligands as proper interactions with this domain is needed for the of the closed conformation []. BugE has a glutamate bound ligand. No charged residues are involved in glutamate binding by BugE, unlike what has been described for all glutamate receptors reported so far. The Bug architecture is highly conserved despite limited sequence identity [].; GO: 0030288 outer membrane-bounded periplasmic space; PDB: 2QPQ_C 2DVZ_A 2F5X_A.
Probab=67.84 E-value=95 Score=33.31 Aligned_cols=151 Identities=15% Similarity=0.158 Sum_probs=83.2
Q ss_pred CcEEEEEecccCCCCHHHHHHHHHHhHccCCCeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHHcCCCCcEEEccCCCCc
Q 003962 548 KPILFTMARLDRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNR 627 (783)
Q Consensus 548 k~iIl~vGRL~~~Kgl~~LieA~~~l~~~~~~~~LvIVG~g~~~~~~~~ee~~~~~~l~~li~~~~L~~~V~flG~~~~~ 627 (783)
.+.++.++.=.+.|+++.|++++++.+. .+++-..|.|.. ..-....+.+..|++ ++++++...
T Consensus 78 ~~~vl~v~~dsp~~t~~eli~~ak~~p~---~~~~g~~g~g~~----------~hl~~~~l~~~~G~~--~~~Vpy~G~- 141 (274)
T PF03401_consen 78 DPNVLVVRADSPYKTLEELIEYAKANPG---KLTFGSSGPGSS----------DHLAAALLAKAAGIK--FTHVPYDGG- 141 (274)
T ss_dssp EEEEEEEETTSS-SSHHHHHHHHHCSCC---C-EEEESSTTSH----------HHHHHHHHHHHHT-----EEEE-SSH-
T ss_pred cceEEEEeCCCccccHHHHHHHHHhCCC---CeEEEecCCCch----------HHHHHHHHHHHhCCc--eEEEEeCCc-
Confidence 3567777777799999999999976532 233433333311 111234455666763 444443222
Q ss_pred CChHHHHHHHHccCcEEEeCCCCCCCcHHHHHHHHcCC--cEEEc---Ccc-----------ccccccccCceEEEECCC
Q 003962 628 VRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGL--PTFAT---CKG-----------GPAEIIVNGKSGYHIDPY 691 (783)
Q Consensus 628 ~~~~el~~~ia~aadvfV~PS~~E~fGltvlEAMa~Gl--PVVat---~~G-----------G~~EiI~dg~~G~li~p~ 691 (783)
.+.+..++....|+.+.. .-......-.|. |+.++ +.. |..++....-.|+..+++
T Consensus 142 --~~~~~allgG~vd~~~~~------~~~~~~~~~~G~~k~Lav~~~~r~~~~pdvPT~~E~G~~d~~~~~~~g~~~p~g 213 (274)
T PF03401_consen 142 --AEALTALLGGHVDAAFGS------PGEALPYVEAGDLKPLAVFSDERSPALPDVPTFKEQGYPDIVFGSWRGLFAPKG 213 (274)
T ss_dssp --HHHHHHHHTTSSSEEEEE------HHHHHHHHHTTSEEEEEECSSS-BTTCTTS-BTTTTT-TTG--EEEEEEEEETT
T ss_pred --cHHHHHHhCCeeeEEeec------HHHHHHHHhCCCceEEEEecCccccccCCCCCHHHhCccceeeeeeeeeecCCC
Confidence 345566666666665543 112333334442 22221 111 222333344568999999
Q ss_pred CHHHHHHHHHHHHHHhhCCHHHHHHHHHHHH
Q 003962 692 HGEQAAEILVDFFEKCKADPSYWDKISLGGL 722 (783)
Q Consensus 692 d~e~lAeaI~~~l~~l~~dp~~~~~ms~~a~ 722 (783)
-+++..+++.+++++..+||+..+.+.+.+.
T Consensus 214 tp~~~~~~l~~a~~~~~~~pe~~~~~~~~g~ 244 (274)
T PF03401_consen 214 TPDEIVDKLADAIKKALEDPEFQEFLEKMGL 244 (274)
T ss_dssp S-HHHHHHHHHHHHHHHT-HHHHHHHHHHTE
T ss_pred CCHHHHHHHHHHHHHHhCCHHHHHHHHHCCC
Confidence 9999999999999999999998776666554
No 194
>PLN02207 UDP-glycosyltransferase
Probab=67.74 E-value=2.4e+02 Score=32.87 Aligned_cols=79 Identities=15% Similarity=0.070 Sum_probs=48.3
Q ss_pred CcEEEccCCCCcCChHHHHHHHHccCcEEEeCCCCCCCcHHHHHHHHcCCcEEEcCcc----cccccccc-CceEEEEC-
Q 003962 616 GQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKG----GPAEIIVN-GKSGYHID- 689 (783)
Q Consensus 616 ~~V~flG~~~~~~~~~el~~~ia~aadvfV~PS~~E~fGltvlEAMa~GlPVVat~~G----G~~EiI~d-g~~G~li~- 689 (783)
++....+ +.+..++...= +.+.||.= =| -++++||+.+|+|+++-... ..+..+.+ -+.|+-+.
T Consensus 332 ~~g~i~~----W~PQ~~IL~H~--~vg~FvTH---~G-wnS~~Eai~~GVP~l~~P~~~DQ~~Na~~~~~~~gvGv~~~~ 401 (468)
T PLN02207 332 GRGMICG----WSPQVEILAHK--AVGGFVSH---CG-WNSIVESLWFGVPIVTWPMYAEQQLNAFLMVKELKLAVELKL 401 (468)
T ss_pred CCeEEEE----eCCHHHHhccc--ccceeeec---Cc-cccHHHHHHcCCCEEecCccccchhhHHHHHHHhCceEEEec
Confidence 4555556 77777776631 23445532 12 24799999999999996433 33443333 34565331
Q ss_pred --------CCCHHHHHHHHHHHH
Q 003962 690 --------PYHGEQAAEILVDFF 704 (783)
Q Consensus 690 --------p~d~e~lAeaI~~~l 704 (783)
.-+.++++++|.+++
T Consensus 402 ~~~~~~~~~v~~e~i~~av~~vm 424 (468)
T PLN02207 402 DYRVHSDEIVNANEIETAIRCVM 424 (468)
T ss_pred ccccccCCcccHHHHHHHHHHHH
Confidence 126789999998877
No 195
>PF04230 PS_pyruv_trans: Polysaccharide pyruvyl transferase; InterPro: IPR007345 Pyruvyl-transferases are involved in peptidoglycan-associated polymer biosynthesis. CsaB in Bacillus anthracis is necessary for the non-covalent anchoring of proteins containing an SLH (S-layer homology) domain to peptidoglycan-associated pyruvylated polysaccharides. WcaK and AmsJ are involved in the biosynthesis of colanic acid in Escherichia coli and of amylovoran in Erwinia amylovora [, ].
Probab=67.12 E-value=1.5e+02 Score=30.21 Aligned_cols=96 Identities=13% Similarity=0.086 Sum_probs=54.9
Q ss_pred CCCHHHHHHHHHHhHccCCCeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHHcCCCCcEEEccCCCCcCChHHHHHHHHc
Q 003962 560 VKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICD 639 (783)
Q Consensus 560 ~Kgl~~LieA~~~l~~~~~~~~LvIVG~g~~~~~~~~ee~~~~~~l~~li~~~~L~~~V~flG~~~~~~~~~el~~~ia~ 639 (783)
..-...+.+.+..+.+......++......... ................++..+.. ..+..++..+++.
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~ 257 (286)
T PF04230_consen 189 EEYIEEIAELIQRLLDKGYKIVLLPFSPSDDDE--------DDDDFNEIDIKAEKFFNVIIIDY---SLSPDELLELISQ 257 (286)
T ss_pred hhHHHHHHHHHHHhhcccceeEEEEeeeccchh--------hHHHHHhhhhhcccccceeEecC---CCCHHHHHHHHhc
Confidence 344555666666666633344444444443310 01111111100222234444442 5667899999996
Q ss_pred cCcEEEeCCCCCCCcHHHHHHHHcCCcEEEcCc
Q 003962 640 TKGAFVQPALYEAFGLTVVEAMTCGLPTFATCK 672 (783)
Q Consensus 640 aadvfV~PS~~E~fGltvlEAMa~GlPVVat~~ 672 (783)
++++|...+. ..+=|+++|+|+|+-..
T Consensus 258 -~~~~Is~RlH-----~~I~a~~~g~P~i~i~y 284 (286)
T PF04230_consen 258 -ADLVISMRLH-----GAILALSLGVPVIAISY 284 (286)
T ss_pred -CCEEEecCCH-----HHHHHHHcCCCEEEEec
Confidence 9999987764 57889999999998643
No 196
>COG1618 Predicted nucleotide kinase [Nucleotide transport and metabolism]
Probab=66.95 E-value=1.2e+02 Score=30.26 Aligned_cols=130 Identities=17% Similarity=0.256 Sum_probs=63.2
Q ss_pred CCCcceEEEEcccccccccCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHHCCCceeeceeEEeCCCCCCCCCcccceee
Q 003962 251 IPMVFNVVILTPHGYFAQDDVLGYPDTGGQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRLLPDAVGTTCGQRLE 330 (783)
Q Consensus 251 ~pm~~rI~iis~h~~~~~~~~lg~p~tGG~~vyv~d~araL~~eLa~~L~~~GheV~~~i~VvT~~~~~~~g~~~~~~~e 330 (783)
++|.|||.|-.+ |.+ |-...+. .+++.|.+.|+.|.. ++|...-+ .|....-...
T Consensus 2 ~~~~mki~ITG~------------PGv-GKtTl~~--------ki~e~L~~~g~kvgG---f~t~EVR~-gGkR~GF~Iv 56 (179)
T COG1618 2 IKMAMKIFITGR------------PGV-GKTTLVL--------KIAEKLREKGYKVGG---FITPEVRE-GGKRIGFKIV 56 (179)
T ss_pred CCcceEEEEeCC------------CCc-cHHHHHH--------HHHHHHHhcCceeee---EEeeeeec-CCeEeeeEEE
Confidence 578999977632 323 4555555 788889999999873 45544322 2332232333
Q ss_pred eecCccCeEEEEeccCCCcccccccccccc-chhhHHHHHHHHHHHHHHHcCCCceEEEEcCCCc-----hHHHHHHHH-
Q 003962 331 KVYGTKYSDILRVPFRTEKGVVRKWISRFE-VWPYLETYTEDVAVEIAKELQGKPDLIIGNYSDG-----NIVASLLAH- 403 (783)
Q Consensus 331 ~i~~~~~v~Ilrvp~~~~~~~~~~~isr~~-i~~~l~~f~~~~~~~l~~~l~~~pDIIh~h~~~~-----~lva~llar- 403 (783)
.+...+..+..++.+.... +.+.- ....++..+..+++.... ..|+|+..--.+ .-+-..+-.
T Consensus 57 dl~tg~~~~la~~~~~~~r------vGkY~V~v~~le~i~~~al~rA~~----~aDvIIIDEIGpMElks~~f~~~ve~v 126 (179)
T COG1618 57 DLATGEEGILARVGFSRPR------VGKYGVNVEGLEEIAIPALRRALE----EADVIIIDEIGPMELKSKKFREAVEEV 126 (179)
T ss_pred EccCCceEEEEEcCCCCcc------cceEEeeHHHHHHHhHHHHHHHhh----cCCEEEEecccchhhccHHHHHHHHHH
Confidence 3332223333343332110 11111 112233344444443332 379998644322 112222222
Q ss_pred -hcCCcEEEEecC
Q 003962 404 -KLGVTQCTIAHA 415 (783)
Q Consensus 404 -~lgvp~v~t~H~ 415 (783)
..+.|++.|+|-
T Consensus 127 l~~~kpliatlHr 139 (179)
T COG1618 127 LKSGKPLIATLHR 139 (179)
T ss_pred hcCCCcEEEEEec
Confidence 347899999994
No 197
>PF12038 DUF3524: Domain of unknown function (DUF3524); InterPro: IPR022701 This domain is functionally uncharacterised and is found in bacteria and eukaryotes. It is about 170 amino acids in length and is found associated with PF00534 from PFAM. Two conserved sequence motifs are found within this entry: HENQ and FNS. There is also a single completely conserved residue S that may be functionally important.
Probab=64.03 E-value=19 Score=35.76 Aligned_cols=110 Identities=12% Similarity=0.093 Sum_probs=55.1
Q ss_pred CCceEEEEcCCCc-hHHHHHHHHhcCCcEEEEecCCCccCCCCCchhhhhccccccccchhhHhHHhhhcCCEEEcCCHH
Q 003962 382 GKPDLIIGNYSDG-NIVASLLAHKLGVTQCTIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTFQ 460 (783)
Q Consensus 382 ~~pDIIh~h~~~~-~lva~llar~lgvp~v~t~H~l~~~~~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~ 460 (783)
..+|+|.+.+-.. +-...+.-...++|.++-+|....+ ||.+...-.. -.|.+ ......-.||.|+.+|.-
T Consensus 58 ~~~dll~aTsmldLa~l~gL~p~l~~~p~ilYFHENQl~-YP~~~~~~rd--~~~~~-----~ni~saLaAD~v~FNS~~ 129 (168)
T PF12038_consen 58 HSYDLLFATSMLDLATLRGLRPDLANVPKILYFHENQLA-YPVSPGQERD--FQYGM-----NNIYSALAADRVVFNSAF 129 (168)
T ss_pred cCCCEEEeeccccHHHHHhhccCCCCCCEEEEEecCccc-CCCCCCcccc--ccHHH-----HHHHHHHhceeeeecchh
Confidence 4689999765432 2222223344579999999975332 4433321111 11211 122344589999999976
Q ss_pred HHhhccccccccccccccccccceeeeccCCCCCCcEEEecCCc
Q 003962 461 EIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGA 504 (783)
Q Consensus 461 ~~~~~~~~v~qy~~~~~f~~p~l~~v~~gi~~~~~k~~VIpnGv 504 (783)
-.+.+-+.++++-.. ||...- ..-++...+|..|+|.|+
T Consensus 130 nr~sFL~~~~~fL~~----~PD~~p-~~~~~~I~~Ks~VL~~pi 168 (168)
T PF12038_consen 130 NRDSFLDGIPSFLKR----MPDHRP-KGLVERIRAKSQVLPVPI 168 (168)
T ss_pred hHHHHHHHHHHHHHH----CCCCCc-hhHHHHHhccCeecCCCC
Confidence 555444444333221 222110 111111245777777764
No 198
>PF03016 Exostosin: Exostosin family; InterPro: IPR004263 Hereditary multiple exostoses (EXT) is an autosomal dominant disorder that is characterised by the appearance of multiple outgrowths of the long bones (exostoses) at their epiphyses []. Mutations in two homologous genes, EXT1 and EXT2, are responsible for the EXT syndrome. The human and mouse EXT genes have at least two homologs in the invertebrate Caenorhabditis elegans, indicating that they do not function exclusively as regulators of bone growth. EXT1 and EXT2 have both been shown to encode glycosyltransferases involved in the chain elongation step of heparan sulphate biosynthesis [].; GO: 0016020 membrane
Probab=62.53 E-value=18 Score=38.75 Aligned_cols=70 Identities=13% Similarity=0.120 Sum_probs=48.2
Q ss_pred hHHHHHHHHccCcEEEeCCCCCCCcHHHHHHHHcCC-cEEEcCc--cccccccccCceEEEECCCCHHHHHHHH
Q 003962 630 NGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGL-PTFATCK--GGPAEIIVNGKSGYHIDPYHGEQAAEIL 700 (783)
Q Consensus 630 ~~el~~~ia~aadvfV~PS~~E~fGltvlEAMa~Gl-PVVat~~--GG~~EiI~dg~~G~li~p~d~e~lAeaI 700 (783)
..+....|++ +..+++|.-...+..-++|||++|| |||.++. -...++|.=....+.++..+..++-+.|
T Consensus 227 ~~~~~~~l~~-S~FCL~p~G~~~~s~Rl~eal~~GcIPVii~d~~~lPf~~~ldw~~fsv~v~~~~~~~l~~iL 299 (302)
T PF03016_consen 227 PSEYMELLRN-SKFCLCPRGDGPWSRRLYEALAAGCIPVIISDDYVLPFEDVLDWSRFSVRVPEADLPELPEIL 299 (302)
T ss_pred chHHHHhccc-CeEEEECCCCCcccchHHHHhhhceeeEEecCcccCCcccccCHHHEEEEECHHHHHHHHHHH
Confidence 3456667775 7778888776668889999999997 8888742 2235566445567778766665555444
No 199
>KOG0780 consensus Signal recognition particle, subunit Srp54 [Intracellular trafficking, secretion, and vesicular transport]
Probab=62.18 E-value=2.2e+02 Score=32.38 Aligned_cols=201 Identities=11% Similarity=0.075 Sum_probs=116.3
Q ss_pred EEEEEecccCCCCHHHHHHHHHHhHccCCCeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHHcCCCCcEEEccCCCCcCC
Q 003962 550 ILFTMARLDRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVR 629 (783)
Q Consensus 550 iIl~vGRL~~~Kgl~~LieA~~~l~~~~~~~~LvIVG~g~~~~~~~~ee~~~~~~l~~li~~~~L~~~V~flG~~~~~~~ 629 (783)
.|=|.|+.+..+-+..+.+...+.++ .++.++||-..- ....|.+..++|.+..+..+ +++|.|.=.-+--..
T Consensus 156 ~iP~ygsyte~dpv~ia~egv~~fKk--e~fdvIIvDTSG----Rh~qe~sLfeEM~~v~~ai~-Pd~vi~VmDasiGQa 228 (483)
T KOG0780|consen 156 RVPFYGSYTEADPVKIASEGVDRFKK--ENFDVIIVDTSG----RHKQEASLFEEMKQVSKAIK-PDEIIFVMDASIGQA 228 (483)
T ss_pred CCeeEecccccchHHHHHHHHHHHHh--cCCcEEEEeCCC----chhhhHHHHHHHHHHHhhcC-CCeEEEEEeccccHh
Confidence 34566788888889999999999987 567788886432 23455667788888877776 577777631111123
Q ss_pred hHHHHHHHHccCcE--EEeCCC----CCCCcHHHHHHHHcCCcEEEcCccccccccccC----ceEEEECCCCHHHHHHH
Q 003962 630 NGELYRYICDTKGA--FVQPAL----YEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNG----KSGYHIDPYHGEQAAEI 699 (783)
Q Consensus 630 ~~el~~~ia~aadv--fV~PS~----~E~fGltvlEAMa~GlPVVat~~GG~~EiI~dg----~~G~li~p~d~e~lAea 699 (783)
.++..+.+.++.|+ .+++-+ --|-.++.+ .+.++||+--.+|..-|-.+.- -.+-+.--+|.+.+.++
T Consensus 229 ae~Qa~aFk~~vdvg~vIlTKlDGhakGGgAlSaV--aaTksPIiFIGtGEhmdDlE~F~pk~FvsrlLGmGDi~glvek 306 (483)
T KOG0780|consen 229 AEAQARAFKETVDVGAVILTKLDGHAKGGGALSAV--AATKSPIIFIGTGEHMDDLEPFDPKPFVSRLLGMGDIEGLVEK 306 (483)
T ss_pred HHHHHHHHHHhhccceEEEEecccCCCCCceeeeh--hhhCCCEEEEecCccccccCCCChHHHHHHHhccccHHHHHHH
Confidence 44555666555553 333333 112233344 3578999987666544433211 01112234577777777
Q ss_pred HHHHHHHhhCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHh----------cchhhhcc-hh---HHHhhhHHHH
Q 003962 700 LVDFFEKCKADPSYWDKISLGGLKRIEEKYTWKIYSQRLLTLTGVY----------GFWKHVSN-LD---RLESRRYLEM 765 (783)
Q Consensus 700 I~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~~~a~~ll~ly~~~----------~~w~~~~~-~~---~~~~~~~~~~ 765 (783)
+.++. ..+++++.+++. +-+||...+.+++-.+.+.- ||- .+++ .+ ....+||+-|
T Consensus 307 ~~ev~--~~d~~el~~kl~-------~gkFtlrd~y~Qfq~imkmGp~s~v~~MiPG~s-~m~~~~e~Es~~~~krm~~m 376 (483)
T KOG0780|consen 307 VQEVG--KDDAKELVEKLK-------QGKFTLRDFYDQFQNIMKMGPLSQVLGMIPGMS-MMSKGNEEESSAKLKRMMTM 376 (483)
T ss_pred HHHHh--hhhHHHHHHHHH-------hCCccHHHHHHHHHHHHhhCCHHHHHhhCCCcc-cCCCcchhHHHHHHHHHHHH
Confidence 76654 112233333222 24799999999998887653 343 4443 22 3355667666
Q ss_pred HHHh
Q 003962 766 FYAL 769 (783)
Q Consensus 766 ~~~~ 769 (783)
+=.+
T Consensus 377 mDsM 380 (483)
T KOG0780|consen 377 MDSM 380 (483)
T ss_pred HHhc
Confidence 5443
No 200
>PRK00676 hemA glutamyl-tRNA reductase; Validated
Probab=61.69 E-value=2.1e+02 Score=31.93 Aligned_cols=125 Identities=8% Similarity=-0.040 Sum_probs=70.5
Q ss_pred CCeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHHcCCCCcEEEccCCCCcCChHHHH----HHHHccCcEEEeCC--CCC
Q 003962 578 ELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELY----RYICDTKGAFVQPA--LYE 651 (783)
Q Consensus 578 ~~~~LvIVG~g~~~~~~~~ee~~~~~~l~~li~~~~L~~~V~flG~~~~~~~~~el~----~~ia~aadvfV~PS--~~E 651 (783)
.+.+++++|.|. .-+..-+...+.|. .+|.+...+....+.++++ .+... +|+.+..| ..-
T Consensus 173 ~~k~vLvIGaGe-----------m~~l~a~~L~~~g~-~~i~v~nRt~~~~~~~~~~~~~~~~~~~-~DvVIs~t~~Tas 239 (338)
T PRK00676 173 KKASLLFIGYSE-----------INRKVAYYLQRQGY-SRITFCSRQQLTLPYRTVVREELSFQDP-YDVIFFGSSESAY 239 (338)
T ss_pred cCCEEEEEcccH-----------HHHHHHHHHHHcCC-CEEEEEcCCccccchhhhhhhhhhcccC-CCEEEEcCCcCCC
Confidence 467999999992 22222333334454 4688877665555666655 55665 89999752 333
Q ss_pred CCcHHHHHHHHcCCcEEEcCccccccccc--cCceEEEECCCCHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHH
Q 003962 652 AFGLTVVEAMTCGLPTFATCKGGPAEIIV--NGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRI 725 (783)
Q Consensus 652 ~fGltvlEAMa~GlPVVat~~GG~~EiI~--dg~~G~li~p~d~e~lAeaI~~~l~~l~~dp~~~~~ms~~a~~~v 725 (783)
+.|....|.+..-.+-+.-|.+-|+++=. ...+-.++ |.|++.+.+. .|-..|++....+...+
T Consensus 240 ~~p~i~~~~~~~~~~r~~iDLAvPRdId~v~~~~~v~Ly---~iDdL~~i~~-------~n~~~R~~~~~~ae~iI 305 (338)
T PRK00676 240 AFPHLSWESLADIPDRIVFDFNVPRTFPWSETPFPHRYL---DMDFISEWVQ-------KHLQCRKEVNNKHKLSL 305 (338)
T ss_pred CCceeeHHHHhhccCcEEEEecCCCCCccccccCCcEEE---EhHHHHHHHH-------HHHHHHHHHHHHHHHHH
Confidence 45555555554322246678887777631 12223344 6777766663 24444555555555544
No 201
>PF04413 Glycos_transf_N: 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase); InterPro: IPR007507 This is a domain found in proteins that transfer activated sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides. Proteins bearing this domain transfer UDP, ADP, GDP or CMP linked sugars. This region is flanked at the N terminus by a signal peptide and at the C terminus by a glycosyl transferase group 1 domain (IPR001296 from INTERPRO). The eukaryotic glycogen synthases may be distant members of this bacterial family [].; GO: 0005529 sugar binding, 0016740 transferase activity, 0005975 carbohydrate metabolic process; PDB: 2XCI_A 2XCU_B.
Probab=59.70 E-value=41 Score=34.03 Aligned_cols=71 Identities=15% Similarity=0.157 Sum_probs=29.5
Q ss_pred CceEEEEcCCCc--hHHHHHHHHhcCCcEEEEecCCCccCCCCCchhhhhccccccccchhhHhHHhhhcCCEEEcCCHH
Q 003962 383 KPDLIIGNYSDG--NIVASLLAHKLGVTQCTIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTFQ 460 (783)
Q Consensus 383 ~pDIIh~h~~~~--~lva~llar~lgvp~v~t~H~l~~~~~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~ 460 (783)
+||+++.-..+. |++. .+++.|+|++..-=-+... +-..|+.+ . ..-+..++..|.|.+.|+.
T Consensus 95 ~P~~~i~~EtElWPnll~--~a~~~~ip~~LvNarls~~----s~~~~~~~-------~--~~~r~~l~~f~~i~aqs~~ 159 (186)
T PF04413_consen 95 RPDLLIWVETELWPNLLR--EAKRRGIPVVLVNARLSER----SFRRYRRF-------P--FLFRPLLSRFDRILAQSEA 159 (186)
T ss_dssp --SEEEEES----HHHHH--H-----S-EEEEEE---------------------------HHHHHHGGG-SEEEESSHH
T ss_pred CCCEEEEEccccCHHHHH--HHhhcCCCEEEEeeeeccc----cchhhhhh-------H--HHHHHHHHhCCEEEECCHH
Confidence 599988765543 4443 4566789976533222111 11111111 1 1123468899999999998
Q ss_pred HHhhcccc
Q 003962 461 EIAGSKDT 468 (783)
Q Consensus 461 ~~~~~~~~ 468 (783)
.++.+...
T Consensus 160 da~r~~~l 167 (186)
T PF04413_consen 160 DAERFRKL 167 (186)
T ss_dssp HHHHHHTT
T ss_pred HHHHHHHc
Confidence 88754433
No 202
>KOG1192 consensus UDP-glucuronosyl and UDP-glucosyl transferase [Carbohydrate transport and metabolism; Energy production and conversion]
Probab=58.88 E-value=2.4e+02 Score=32.51 Aligned_cols=142 Identities=11% Similarity=0.120 Sum_probs=75.7
Q ss_pred CcEEEEEecccC-----CCCHHHHHHHHHHhHccCCCeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHHcC--CCCcEEE
Q 003962 548 KPILFTMARLDR-----VKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYK--LNGQFRW 620 (783)
Q Consensus 548 k~iIl~vGRL~~-----~Kgl~~LieA~~~l~~~~~~~~LvIVG~g~~~~~~~~ee~~~~~~l~~li~~~~--L~~~V~f 620 (783)
..++++.|.+.. .+-...++.+++++ +++.++++=..... .. +.+... ..++|..
T Consensus 278 ~vvyvSfGS~~~~~~lp~~~~~~l~~~l~~~----~~~~FiW~~~~~~~-----------~~---~~~~~~~~~~~nV~~ 339 (496)
T KOG1192|consen 278 SVVYISFGSMVNSADLPEEQKKELAKALESL----QGVTFLWKYRPDDS-----------IY---FPEGLPNRGRGNVVL 339 (496)
T ss_pred CeEEEECCcccccccCCHHHHHHHHHHHHhC----CCceEEEEecCCcc-----------hh---hhhcCCCCCcCceEE
Confidence 556777787753 34445555565554 46666665554321 00 222221 1357888
Q ss_pred ccCCCCcCChHHHHHHHHcc-CcEEEeCCCCCCCcHHHHHHHHcCCcEEEc----Ccccccccc-ccCceEEEECC--CC
Q 003962 621 ISSQMNRVRNGELYRYICDT-KGAFVQPALYEAFGLTVVEAMTCGLPTFAT----CKGGPAEII-VNGKSGYHIDP--YH 692 (783)
Q Consensus 621 lG~~~~~~~~~el~~~ia~a-advfV~PS~~E~fGltvlEAMa~GlPVVat----~~GG~~EiI-~dg~~G~li~p--~d 692 (783)
.+ +++..++. +... .++||. .=|++ +++||..+|+|+++. +..-.+..+ .+|..|....- .+
T Consensus 340 ~~----W~PQ~~ll--l~H~~v~~FvT---HgG~n-St~E~~~~GvP~v~~Plf~DQ~~Na~~i~~~g~~~v~~~~~~~~ 409 (496)
T KOG1192|consen 340 SK----WAPQNDLL--LDHPAVGGFVT---HGGWN-STLESIYSGVPMVCVPLFGDQPLNARLLVRHGGGGVLDKRDLVS 409 (496)
T ss_pred ec----CCCcHHHh--cCCCcCcEEEE---CCccc-HHHHHHhcCCceecCCccccchhHHHHHHhCCCEEEEehhhcCc
Confidence 77 66667765 2222 334442 23444 459999999999964 333344444 44444444321 12
Q ss_pred HHHHHHHHHHHHHHhhCCHHHHHHHHHHHH
Q 003962 693 GEQAAEILVDFFEKCKADPSYWDKISLGGL 722 (783)
Q Consensus 693 ~e~lAeaI~~~l~~l~~dp~~~~~ms~~a~ 722 (783)
.+ +.+++..++ .++++.+...+-+.
T Consensus 410 ~~-~~~~~~~il----~~~~y~~~~~~l~~ 434 (496)
T KOG1192|consen 410 EE-LLEAIKEIL----ENEEYKEAAKRLSE 434 (496)
T ss_pred HH-HHHHHHHHH----cChHHHHHHHHHHH
Confidence 22 566665554 77776655444443
No 203
>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain. This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.
Probab=57.24 E-value=2.3e+02 Score=29.02 Aligned_cols=162 Identities=12% Similarity=0.031 Sum_probs=79.1
Q ss_pred CeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHHcCCCCcEEEccCCCCcCChHHHHHHHHccCcEEEeCCCC-CCCcHHH
Q 003962 579 LVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALY-EAFGLTV 657 (783)
Q Consensus 579 ~~~LvIVG~g~~~~~~~~ee~~~~~~l~~li~~~~L~~~V~flG~~~~~~~~~el~~~ia~aadvfV~PS~~-E~fGltv 657 (783)
+++++++..... +++..+++. ++|.|... ... ...+.+ +++++...-. |-.--..
T Consensus 32 ga~VtVvsp~~~------------~~l~~l~~~----~~i~~~~~---~~~----~~dl~~-~~lVi~at~d~~ln~~i~ 87 (205)
T TIGR01470 32 GAQLRVIAEELE------------SELTLLAEQ----GGITWLAR---CFD----ADILEG-AFLVIAATDDEELNRRVA 87 (205)
T ss_pred CCEEEEEcCCCC------------HHHHHHHHc----CCEEEEeC---CCC----HHHhCC-cEEEEECCCCHHHHHHHH
Confidence 456667765433 234444432 46777651 111 123443 6654443322 2333456
Q ss_pred HHHHHcCCcEEEcCccccccc-----cccCceEEEE-CCCCHHHHHHHHHHHHHHhhC-CHHHHHHHHHHHHHHHHHhCC
Q 003962 658 VEAMTCGLPTFATCKGGPAEI-----IVNGKSGYHI-DPYHGEQAAEILVDFFEKCKA-DPSYWDKISLGGLKRIEEKYT 730 (783)
Q Consensus 658 lEAMa~GlPVVat~~GG~~Ei-----I~dg~~G~li-~p~d~e~lAeaI~~~l~~l~~-dp~~~~~ms~~a~~~v~~~ys 730 (783)
.+|-..|+||-+.+.....++ +..|.--+-+ ..+..-.+|..|.+-++.++. +-..+-++....|..+++...
T Consensus 88 ~~a~~~~ilvn~~d~~e~~~f~~pa~~~~g~l~iaisT~G~sP~la~~lr~~ie~~l~~~~~~~~~~~~~~R~~~k~~~~ 167 (205)
T TIGR01470 88 HAARARGVPVNVVDDPELCSFIFPSIVDRSPVVVAISSGGAAPVLARLLRERIETLLPPSLGDLATLAATWRDAVKKRLP 167 (205)
T ss_pred HHHHHcCCEEEECCCcccCeEEEeeEEEcCCEEEEEECCCCCcHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHhhCC
Confidence 677788999977665554444 3344322222 233445677777766666553 223344555566666655443
Q ss_pred HHHHHHHHHHHHHHhcchhhhcchhHHHhhhHHH
Q 003962 731 WKIYSQRLLTLTGVYGFWKHVSNLDRLESRRYLE 764 (783)
Q Consensus 731 w~~~a~~ll~ly~~~~~w~~~~~~~~~~~~~~~~ 764 (783)
-..--++++.-.-.-.++..+.+-...+..++++
T Consensus 168 ~~~~r~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 201 (205)
T TIGR01470 168 NGAARRRFWEKFFDGAFAERVLAGREEQAERVLA 201 (205)
T ss_pred CHHHHHHHHHHHhccHHHHHHHcCCHHHHHHHHH
Confidence 2222222222111123555555555555555554
No 204
>TIGR00087 surE 5'/3'-nucleotidase SurE. E. coli SurE is Recommended cutoffs are 15 for homology, 40 for probable orthology, and 200 for orthology with full-length homology.
Probab=56.41 E-value=2.1e+02 Score=30.31 Aligned_cols=36 Identities=31% Similarity=0.433 Sum_probs=23.2
Q ss_pred cCCCceEEEE--cC-C--------CchHHHHHHHHhcCCcEEEEecC
Q 003962 380 LQGKPDLIIG--NY-S--------DGNIVASLLAHKLGVTQCTIAHA 415 (783)
Q Consensus 380 l~~~pDIIh~--h~-~--------~~~lva~llar~lgvp~v~t~H~ 415 (783)
+..+||+|++ |. . -|...|++-+...|+|-+..-..
T Consensus 83 ~~~~pDLVvSGiN~G~N~g~~v~ySGTVgAA~ea~~~GipaiA~S~~ 129 (244)
T TIGR00087 83 MPEVPDLVISGINAGENLGTDVTYSGTVGAAMEAAIHGVPAIAISLQ 129 (244)
T ss_pred ccCCCCeEEeccccCCCCCccEecchhHHHHHHHHHcCCCeEEEEec
Confidence 3567999994 11 1 12355666677889998876653
No 205
>COG2910 Putative NADH-flavin reductase [General function prediction only]
Probab=56.32 E-value=11 Score=38.20 Aligned_cols=33 Identities=21% Similarity=0.368 Sum_probs=26.1
Q ss_pred ceEEEEcccccccccCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHHCCCceeeceeEEeCC
Q 003962 255 FNVVILTPHGYFAQDDVLGYPDTGGQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRL 316 (783)
Q Consensus 255 ~rI~iis~h~~~~~~~~lg~p~tGG~~vyv~d~araL~~eLa~~L~~~GheV~~~i~VvT~~ 316 (783)
|||+||+..|+.| . ++++...++||+|+ -++|.
T Consensus 1 mKIaiIgAsG~~G--------------s-----------~i~~EA~~RGHeVT----AivRn 33 (211)
T COG2910 1 MKIAIIGASGKAG--------------S-----------RILKEALKRGHEVT----AIVRN 33 (211)
T ss_pred CeEEEEecCchhH--------------H-----------HHHHHHHhCCCeeE----EEEeC
Confidence 8999999887733 1 56677889999999 77775
No 206
>PRK13932 stationary phase survival protein SurE; Provisional
Probab=55.84 E-value=1.7e+02 Score=31.30 Aligned_cols=35 Identities=37% Similarity=0.616 Sum_probs=22.6
Q ss_pred cCCCceEEEE--cC-C--------CchHHHHHHHHhcCCcEEEEec
Q 003962 380 LQGKPDLIIG--NY-S--------DGNIVASLLAHKLGVTQCTIAH 414 (783)
Q Consensus 380 l~~~pDIIh~--h~-~--------~~~lva~llar~lgvp~v~t~H 414 (783)
+..+||+|++ |. . -|...|++-+...|+|-+..-.
T Consensus 88 ~~~~pDLVvSGIN~G~N~G~dv~ySGTVgAA~Ea~~~GiPsIA~S~ 133 (257)
T PRK13932 88 LPEKPDLIVSGINYGSNTATNTLYSGTVAAALEGAIQGIPSLAFSL 133 (257)
T ss_pred cCCCCCEEEECCcCCCCCCcCEecchhHHHHHHHHHcCCCeEEEEc
Confidence 3467999995 11 1 1235566667778999886655
No 207
>COG1703 ArgK Putative periplasmic protein kinase ArgK and related GTPases of G3E family [Amino acid transport and metabolism]
Probab=55.11 E-value=2.1e+02 Score=31.42 Aligned_cols=144 Identities=16% Similarity=0.137 Sum_probs=75.2
Q ss_pred hhcCCChh----cHHHHhccCCCcceEEEEcccccccccCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHHCCCceeece
Q 003962 235 LLEAPDPC----TLETFLGRIPMVFNVVILTPHGYFAQDDVLGYPDTGGQVVYILDQVRALEDEMLLRIKQQGLDITPQI 310 (783)
Q Consensus 235 ~~~~p~~~----~~~~f~~~~pm~~rI~iis~h~~~~~~~~lg~p~tGG~~vyv~d~araL~~eLa~~L~~~GheV~~~i 310 (783)
++|...|. .-+..-...|..-|--+|...|.|| -|-...+- .|...|.++||.|.
T Consensus 25 lvEs~~~~h~~~a~~ll~~l~p~tG~a~viGITG~PG----------aGKSTli~--------~L~~~l~~~G~rVa--- 83 (323)
T COG1703 25 LVESRRPDHRALARELLRALYPRTGNAHVIGITGVPG----------AGKSTLIE--------ALGRELRERGHRVA--- 83 (323)
T ss_pred HHhcCCchhhhHHHHHHHHHhhcCCCCcEEEecCCCC----------CchHHHHH--------HHHHHHHHCCcEEE---
Confidence 45555444 3333334445544444555555543 25555555 67778899999999
Q ss_pred eEEeCCCCC--CCCCcccc--eeeeecCccCeEEEEeccCCCccccccccccccchhhHHHHHHHHHHHHHHHcCCCceE
Q 003962 311 LIITRLLPD--AVGTTCGQ--RLEKVYGTKYSDILRVPFRTEKGVVRKWISRFEVWPYLETYTEDVAVEIAKELQGKPDL 386 (783)
Q Consensus 311 ~VvT~~~~~--~~g~~~~~--~~e~i~~~~~v~Ilrvp~~~~~~~~~~~isr~~i~~~l~~f~~~~~~~l~~~l~~~pDI 386 (783)
|+.-.... ..|.-..+ +.......+|+-|-.+|.+...| .+| .-+.++..-+. ...+|+
T Consensus 84 -VlAVDPSSp~TGGsiLGDRiRM~~~~~~~~vFiRs~~srG~lG----GlS---------~at~~~i~~ld---AaG~Dv 146 (323)
T COG1703 84 -VLAVDPSSPFTGGSILGDRIRMQRLAVDPGVFIRSSPSRGTLG----GLS---------RATREAIKLLD---AAGYDV 146 (323)
T ss_pred -EEEECCCCCCCCccccccHhhHHhhccCCCeEEeecCCCccch----hhh---------HHHHHHHHHHH---hcCCCE
Confidence 66554332 22322222 33344445677777777775433 122 22223332222 246999
Q ss_pred EEEcCCCchHHHHHHHHhcCCcEEEEecCC
Q 003962 387 IIGNYSDGNIVASLLAHKLGVTQCTIAHAL 416 (783)
Q Consensus 387 Ih~h~~~~~lva~llar~lgvp~v~t~H~l 416 (783)
|+.-....+-.=.-++....+-++++..+.
T Consensus 147 IIVETVGvGQsev~I~~~aDt~~~v~~pg~ 176 (323)
T COG1703 147 IIVETVGVGQSEVDIANMADTFLVVMIPGA 176 (323)
T ss_pred EEEEecCCCcchhHHhhhcceEEEEecCCC
Confidence 997765443222223344455566666654
No 208
>PF10933 DUF2827: Protein of unknown function (DUF2827); InterPro: IPR021234 This is a family of uncharacterised proteins found in Burkholderia.
Probab=54.33 E-value=1.2e+02 Score=33.81 Aligned_cols=162 Identities=12% Similarity=0.139 Sum_probs=102.7
Q ss_pred hhcccc-CCCCcEEEEEecccCCCCHHHHHHHHHHhHccCCC-eEEEEEeCCCCCCCccHHHHHHHHHHHHHHHHcCC--
Q 003962 539 HLCVLK-DRNKPILFTMARLDRVKNLTGLVEWYGKNAKLREL-VNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKL-- 614 (783)
Q Consensus 539 ~~gll~-~~~k~iIl~vGRL~~~Kgl~~LieA~~~l~~~~~~-~~LvIVG~g~~~~~~~~ee~~~~~~l~~li~~~~L-- 614 (783)
++|... .+.+.+-+|=-+++-.|+-..=+=+..+.-+..|+ +..+.|-...+. .+...+..++..+.+
T Consensus 180 ~FGY~p~~~~~RvavfEPNi~vvK~~~~PmLi~E~aYR~~P~~v~~~~V~Nt~~~--------ke~~~F~~f~~~ldlvr 251 (364)
T PF10933_consen 180 RFGYQPGRPGKRVAVFEPNISVVKTCFIPMLICEEAYRADPDAVEHVYVTNTYHL--------KEHPTFVNFANSLDLVR 251 (364)
T ss_pred ccccccCCCCceEEEecCCceEEeecCccHHHHHHHHHhChhhcceEEEecchhh--------hcCHHHHHHHHhhHHhh
Confidence 355532 23344555556677677643322222222223343 455666554331 123455566665554
Q ss_pred CCcEEEccCCCCcCChHHHHHHHHccCcEEEeCCCCCCCcHHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHH
Q 003962 615 NGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGE 694 (783)
Q Consensus 615 ~~~V~flG~~~~~~~~~el~~~ia~aadvfV~PS~~E~fGltvlEAMa~GlPVVat~~GG~~EiI~dg~~G~li~p~d~e 694 (783)
+++..|-| +. +++.++++-.|++|.=.+.-+....-.||+--|=|.|-.. ..+. +.|+..+..|..
T Consensus 252 ~gkasfeg----R~---~~p~fla~~tD~VvSHqWeN~lNYlY~daLyggYPLVHNS-----~~l~--d~GYYY~~fD~~ 317 (364)
T PF10933_consen 252 DGKASFEG----RF---DFPDFLAQHTDAVVSHQWENPLNYLYYDALYGGYPLVHNS-----PLLK--DVGYYYPDFDAF 317 (364)
T ss_pred cCeeEEee----ec---ChHHHHHhCCCEEEeccccchhhHHHHHHHhcCCCcccCc-----chhc--ccCcCCCCccHH
Confidence 57889998 54 4566777778999987776667888999999999998742 2332 379999999999
Q ss_pred HHHHHHHHHHHHhhCCHHHHHHHHHHHHHHH
Q 003962 695 QAAEILVDFFEKCKADPSYWDKISLGGLKRI 725 (783)
Q Consensus 695 ~lAeaI~~~l~~l~~dp~~~~~ms~~a~~~v 725 (783)
+=++++.+++. +....++...+++++.+
T Consensus 318 ~G~r~L~~A~~---~HD~~~~~Y~~ra~~~l 345 (364)
T PF10933_consen 318 EGARQLLRAIR---EHDADLDAYRARARRLL 345 (364)
T ss_pred HHHHHHHHHHH---HccccHHHHHHHHHHHH
Confidence 99999988875 44455666666666655
No 209
>PF05686 Glyco_transf_90: Glycosyl transferase family 90; InterPro: IPR006598 Cryptococcus neoformans is a pathogenic fungus which most commonly affects the central nervous system and causes fatal meningoencephalitis primarily in patients with AIDS. This fungus produces a thick extracellular polysaccharide capsule which is well recognised as a virulence factor. CAP10 is required for capsule formation and virulence [].
Probab=46.34 E-value=52 Score=37.44 Aligned_cols=81 Identities=12% Similarity=-0.057 Sum_probs=55.3
Q ss_pred HHcCCcEEEcCc---cccccccccCceEEEECC-CCHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhCCHHHHHH
Q 003962 661 MTCGLPTFATCK---GGPAEIIVNGKSGYHIDP-YHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEEKYTWKIYSQ 736 (783)
Q Consensus 661 Ma~GlPVVat~~---GG~~EiI~dg~~G~li~p-~d~e~lAeaI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~~~a~ 736 (783)
|+||-.|+.... .-..+.+..+++=+-+.. +|-+++.++| +-+.+|++..++|+++|.+.+.+..+.+.+..
T Consensus 234 L~c~SvVl~~~~~~~e~f~~~L~P~vHYVPV~~~~d~sdL~~~v----~w~~~~~~~A~~IA~~g~~f~~~~L~~~~~~~ 309 (395)
T PF05686_consen 234 LACNSVVLKVKSPYYEFFYRALKPWVHYVPVKRDDDLSDLEEKV----EWLNAHDDEAQRIAENGQRFAREYLTMEDVYC 309 (395)
T ss_pred HcCCceEEEeCCcHHHHHHhhhcccccEEEeccccchhhHHHHh----hhcccChHHHHHHHHHHHHHHHHHhhhhHHHH
Confidence 666666665321 122333445555555655 4678888888 44558999999999999999988888877777
Q ss_pred HHHHHHHHh
Q 003962 737 RLLTLTGVY 745 (783)
Q Consensus 737 ~ll~ly~~~ 745 (783)
=+..+...|
T Consensus 310 Y~~~LL~eY 318 (395)
T PF05686_consen 310 YWRRLLLEY 318 (395)
T ss_pred HHHHHHHHH
Confidence 666666555
No 210
>PF09752 DUF2048: Uncharacterized conserved protein (DUF2048); InterPro: IPR019149 This family of proteins has no known function.
Probab=43.90 E-value=1.3e+02 Score=33.48 Aligned_cols=33 Identities=21% Similarity=0.139 Sum_probs=24.2
Q ss_pred CCceEEEEcCCCchHHHHHHHHhcCCcEEEEec
Q 003962 382 GKPDLIIGNYSDGNIVASLLAHKLGVTQCTIAH 414 (783)
Q Consensus 382 ~~pDIIh~h~~~~~lva~llar~lgvp~v~t~H 414 (783)
+-.-+..+-.+.|+..|++++.....|+....+
T Consensus 173 G~~~~g~~G~SmGG~~A~laa~~~p~pv~~vp~ 205 (348)
T PF09752_consen 173 GYGPLGLTGISMGGHMAALAASNWPRPVALVPC 205 (348)
T ss_pred CCCceEEEEechhHhhHHhhhhcCCCceeEEEe
Confidence 344577777888889999999887777655444
No 211
>smart00672 CAP10 Putative lipopolysaccharide-modifying enzyme.
Probab=43.71 E-value=91 Score=33.27 Aligned_cols=85 Identities=9% Similarity=-0.026 Sum_probs=53.9
Q ss_pred HHHHHcCCcEEEcCc---cccccccccCceEEEECCCCH-HHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhCCHHH
Q 003962 658 VEAMTCGLPTFATCK---GGPAEIIVNGKSGYHIDPYHG-EQAAEILVDFFEKCKADPSYWDKISLGGLKRIEEKYTWKI 733 (783)
Q Consensus 658 lEAMa~GlPVVat~~---GG~~EiI~dg~~G~li~p~d~-e~lAeaI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~~ 733 (783)
-=-|+|+-.|+.... .-..+.++.++.=+-+.+... +++.++|.-+ .++++..++|+++|++.+.+..+.+.
T Consensus 162 ~~~l~~~Svvl~~~~~~~~~~~~~L~P~~HYvPv~~d~sd~~l~~~i~~~----~~~~~~a~~Ia~~~~~~~~~~L~~~~ 237 (256)
T smart00672 162 KYILACDSVVLKVKPEYYEFFSRGLQPWVHYWPIKSDLSCRELKEAVDWG----NEHDKKAQEIGKRGSEFIQQNLSMED 237 (256)
T ss_pred HHHHhcCceEEEeCCchhHHHHhcccCccceEEeeCCCchhhHHHHHHHH----HhCHHHHHHHHHHHHHHHHHHcCHHH
Confidence 334566655555432 112223334444444544222 3388888444 48999999999999999988888888
Q ss_pred HHHHHHHHHHHhc
Q 003962 734 YSQRLLTLTGVYG 746 (783)
Q Consensus 734 ~a~~ll~ly~~~~ 746 (783)
+..-+..+...|+
T Consensus 238 ~~~Y~~~ll~eya 250 (256)
T smart00672 238 VYDYMFHLLQEYA 250 (256)
T ss_pred HHHHHHHHHHHHH
Confidence 8777777766553
No 212
>KOG1021 consensus Acetylglucosaminyltransferase EXT1/exostosin 1 [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis; Extracellular structures]
Probab=43.69 E-value=1.9e+02 Score=33.63 Aligned_cols=96 Identities=7% Similarity=0.041 Sum_probs=57.6
Q ss_pred HHHHHHHHccCcEEEeCCCCCCCcHHHHHHHHcCC-cEEEcCc--cccccccccCceEEEECCCCHHHHHHHHHHHHHHh
Q 003962 631 GELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGL-PTFATCK--GGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKC 707 (783)
Q Consensus 631 ~el~~~ia~aadvfV~PS~~E~fGltvlEAMa~Gl-PVVat~~--GG~~EiI~dg~~G~li~p~d~e~lAeaI~~~l~~l 707 (783)
....+.|++ +-.+++|+-++...-.++||+.+|| |||.++. ....+++.-..-++.++ .+++-+.|.+.+..
T Consensus 335 ~~y~~~m~~-S~FCL~p~Gd~~ts~R~fdai~~gCvPViisd~~~lpf~~~~d~~~fSV~v~---~~~v~~~~~~iL~~- 409 (464)
T KOG1021|consen 335 LNYMEGMQD-SKFCLCPPGDTPTSPRLFDAIVSGCVPVIISDGIQLPFGDVLDWTEFSVFVP---EKDVPELIKNILLS- 409 (464)
T ss_pred chHHHHhhc-CeEEECCCCCCcccHhHHHHHHhCCccEEEcCCcccCcCCCccceEEEEEEE---HHHhhhHHHHHHHh-
Confidence 345667775 8888999998888889999999998 9999865 23344554444556664 33333333443321
Q ss_pred hCCHHHHHHHHHHHHHHHHHhCCHH
Q 003962 708 KADPSYWDKISLGGLKRIEEKYTWK 732 (783)
Q Consensus 708 ~~dp~~~~~ms~~a~~~v~~~ysw~ 732 (783)
.......+|.++-...+..++.|.
T Consensus 410 -i~~~~~~~m~~~v~~~v~r~~~~~ 433 (464)
T KOG1021|consen 410 -IPEEEVLRMRENVIRLVPRHFLKK 433 (464)
T ss_pred -cCHHHHHHHHHHHHHHHHhhEEeC
Confidence 122333445554444444445444
No 213
>KOG0832 consensus Mitochondrial/chloroplast ribosomal protein S2 [Translation, ribosomal structure and biogenesis]
Probab=43.53 E-value=2.5e+02 Score=29.46 Aligned_cols=125 Identities=15% Similarity=0.206 Sum_probs=68.5
Q ss_pred CCcEEEEEecccCCCCHHHHHHHHHHhHccCCCeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHHcCCCCcEEEccCCCC
Q 003962 547 NKPILFTMARLDRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMN 626 (783)
Q Consensus 547 ~k~iIl~vGRL~~~Kgl~~LieA~~~l~~~~~~~~LvIVG~g~~~~~~~~ee~~~~~~l~~li~~~~L~~~V~flG~~~~ 626 (783)
..-+|+|+|+ ..+...++|.+++=...+.-.+ -..|+-... .. .....+.. +.+.+++.+.|....
T Consensus 107 r~GiILFv~t---n~~~~~~ve~aA~r~~gy~~~~-~w~~G~lTN-~~-----~l~g~~~~--~~~~~pd~~~f~~t~-- 172 (251)
T KOG0832|consen 107 RGGIILFVGT---NNGFKDLVERAARRAGGYSHNR-KWLGGLLTN-AR-----ELFGALVR--KFLSLPDALCFLPTL-- 172 (251)
T ss_pred cCCeEEEEec---CcchHHHHHHHHHHhcCceeee-eeccceeec-ch-----hhcccccc--cccCCCcceeecccC--
Confidence 3457899997 5666777776665433322222 222332111 00 00001111 223456667776521
Q ss_pred cCChHHHHHHHHccCcEEEeCCCCCCCcHHHHHHHHcCCcEEEc-CccccccccccCceEEEECCCC-HHHHHHHHHHHH
Q 003962 627 RVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFAT-CKGGPAEIIVNGKSGYHIDPYH-GEQAAEILVDFF 704 (783)
Q Consensus 627 ~~~~~el~~~ia~aadvfV~PS~~E~fGltvlEAMa~GlPVVat-~~GG~~EiI~dg~~G~li~p~d-~e~lAeaI~~~l 704 (783)
..|++|.-...|... +++||.-++.|+|+- |....+++| -+.++.+| .-...+-+..++
T Consensus 173 -------------~~D~vvvln~~e~~s-AilEA~K~~IPTIgIVDtN~~P~li-----TYpVPaNDDs~~sv~f~~~l~ 233 (251)
T KOG0832|consen 173 -------------TPDLVVVLNPEENHS-AILEAAKMAIPTIGIVDTNCNPELI-----TYPVPANDDSPASVEFILNLL 233 (251)
T ss_pred -------------CcceeEecCcccccH-HHHHHHHhCCCeEEEecCCCCccce-----eeccCCCCCcHHHHHHHHHHH
Confidence 237888877777766 899999999999996 666667776 34454433 333334444433
No 214
>COG1647 Esterase/lipase [General function prediction only]
Probab=41.38 E-value=1.4e+02 Score=31.39 Aligned_cols=44 Identities=20% Similarity=0.175 Sum_probs=29.9
Q ss_pred HHHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHhcCCcEEEEecC
Q 003962 370 EDVAVEIAKELQGKPDLIIGNYSDGNIVASLLAHKLGVTQCTIAHA 415 (783)
Q Consensus 370 ~~~~~~l~~~l~~~pDIIh~h~~~~~lva~llar~lgvp~v~t~H~ 415 (783)
.+..+.+.. .+-..|.++--+.|++.+..+|..+.++-++..-+
T Consensus 73 ~d~Y~~L~~--~gy~eI~v~GlSmGGv~alkla~~~p~K~iv~m~a 116 (243)
T COG1647 73 EDGYRDLKE--AGYDEIAVVGLSMGGVFALKLAYHYPPKKIVPMCA 116 (243)
T ss_pred HHHHHHHHH--cCCCeEEEEeecchhHHHHHHHhhCCccceeeecC
Confidence 344444443 24556777888999999999999887665555443
No 215
>PF05728 UPF0227: Uncharacterised protein family (UPF0227); InterPro: IPR008886 Despite being classed as uncharacterised proteins, the members of this family are almost certainly enzymes in that they contain a domain distantly related to IPR000073 from INTERPRO. One of the members of this family YqiA has been shown to be a esterase []. Other members, which include the Escherichia coli (strain K12) YcfP protein are uncharacterised.
Probab=39.53 E-value=2.7e+02 Score=28.19 Aligned_cols=30 Identities=27% Similarity=0.359 Sum_probs=22.6
Q ss_pred EEEEcCCCchHHHHHHHHhcCCcEEEEecC
Q 003962 386 LIIGNYSDGNIVASLLAHKLGVTQCTIAHA 415 (783)
Q Consensus 386 IIh~h~~~~~lva~llar~lgvp~v~t~H~ 415 (783)
++..-++.|++.|..++.+.++|.|.+-=+
T Consensus 61 ~~liGSSlGG~~A~~La~~~~~~avLiNPa 90 (187)
T PF05728_consen 61 VVLIGSSLGGFYATYLAERYGLPAVLINPA 90 (187)
T ss_pred eEEEEEChHHHHHHHHHHHhCCCEEEEcCC
Confidence 455555678899999999999998765433
No 216
>COG0482 TrmU Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain [Translation, ribosomal structure and biogenesis]
Probab=37.34 E-value=36 Score=37.99 Aligned_cols=105 Identities=16% Similarity=0.141 Sum_probs=51.7
Q ss_pred CCcchhhHHHHHHHHHHHHHHHHHHCCCceeeceeEEeCCCCC-CCCCcccce-----eeeecCccCeEEEEeccCCCcc
Q 003962 277 TGGQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRLLPD-AVGTTCGQR-----LEKVYGTKYSDILRVPFRTEKG 350 (783)
Q Consensus 277 tGG~~vyv~d~araL~~eLa~~L~~~GheV~~~i~VvT~~~~~-~~g~~~~~~-----~e~i~~~~~v~Ilrvp~~~~~~ 350 (783)
+||+-..+. |..|+++||+|. =++-...+ ..+..|... .+.+...=|+....
T Consensus 11 SGGVDSSVa----------A~lLk~QGyeVi----Gl~m~~~~~~~~~~C~s~~d~~da~~va~~LGIp~~~-------- 68 (356)
T COG0482 11 SGGVDSSVA----------AYLLKEQGYEVI----GLFMKNWDEDGGGGCCSEEDLRDAERVADQLGIPLYV-------- 68 (356)
T ss_pred cCCHHHHHH----------HHHHHHcCCeEE----EEEEEeeccCCCCcCCchhHHHHHHHHHHHhCCceEE--------
Confidence 578766665 345899999998 44444333 222233311 12222212233333
Q ss_pred ccccccccccchhhHHHHHHHHHHHHHHHcC----CCceEEEEcCCCchHHHHHHHHhcCCcEEEEecC
Q 003962 351 VVRKWISRFEVWPYLETYTEDVAVEIAKELQ----GKPDLIIGNYSDGNIVASLLAHKLGVTQCTIAHA 415 (783)
Q Consensus 351 ~~~~~isr~~i~~~l~~f~~~~~~~l~~~l~----~~pDIIh~h~~~~~lva~llar~lgvp~v~t~H~ 415 (783)
+.+.+.|.......++.+.. ..|||.--+.-...... -.+..+|.-.+.|-|=
T Consensus 69 -----------vdf~~~y~~~V~~~f~~~Y~~G~TPNPci~CN~~iKF~~~l-~~a~~lgad~iATGHY 125 (356)
T COG0482 69 -----------VDFEKEFWNKVFEYFLAEYKAGKTPNPCILCNKEIKFKALL-DYAKELGADYIATGHY 125 (356)
T ss_pred -----------EchHHHHHHHHHHHHHHHHhCCCCCCcchhcCHHHHHHHHH-HHHHHcCCCeEEEeee
Confidence 33334444433333333322 45776543333332222 2334489889999984
No 217
>PF15024 Glyco_transf_18: Glycosyltransferase family 18
Probab=36.14 E-value=92 Score=36.85 Aligned_cols=154 Identities=13% Similarity=0.120 Sum_probs=96.1
Q ss_pred CcEEEEEeccc-CCCCHHHHHHHHHHhHccCCCeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHHcCCCCcEEEccCCCC
Q 003962 548 KPILFTMARLD-RVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMN 626 (783)
Q Consensus 548 k~iIl~vGRL~-~~Kgl~~LieA~~~l~~~~~~~~LvIVG~g~~~~~~~~ee~~~~~~l~~li~~~~L~~~V~flG~~~~ 626 (783)
++..+-.|.-. -.||-+..++.+.+.. .++-.|.+.... ...++.-|.=+|
T Consensus 277 ~~~AlVyGK~~~~w~~k~~~l~~l~~~~----eih~tV~~~~~~--------------------~~~~P~~V~NHG---- 328 (559)
T PF15024_consen 277 KNQALVYGKERYMWKGKEKYLDVLHKYM----EIHGTVYDEPQR--------------------PPNVPSFVKNHG---- 328 (559)
T ss_pred cceeEEEccchhhhcCcHHHHHHHHhhc----EEEEEeccCCCC--------------------CcccchhhhhcC----
Confidence 34445555543 3567777777776543 344444333211 112344466667
Q ss_pred cCChHHHHHHHHccCcEEEeCCC-CCCCcHHHHHHHHcCCcEEEcCccccccc-----cc-------------------c
Q 003962 627 RVRNGELYRYICDTKGAFVQPAL-YEAFGLTVVEAMTCGLPTFATCKGGPAEI-----IV-------------------N 681 (783)
Q Consensus 627 ~~~~~el~~~ia~aadvfV~PS~-~E~fGltvlEAMa~GlPVVat~~GG~~Ei-----I~-------------------d 681 (783)
.++..|+..++.. +-+||=--. +| |=+-+||+|.|+|-+-.....+..- .. .
T Consensus 329 ~l~~~ef~~lL~~-akvfiGlGfP~E--gPaPlEAia~G~vFlNp~~~pp~s~~n~~ff~~KPt~r~~~SQhPY~e~~iG 405 (559)
T PF15024_consen 329 ILSGDEFQQLLRK-AKVFIGLGFPYE--GPAPLEAIANGCVFLNPRFNPPHSRLNTEFFKGKPTLREWTSQHPYAEEFIG 405 (559)
T ss_pred cCCHHHHHHHHHh-hhEeeecCCCCC--CCChHHHHHcCCccccccCCCCCcccccccccCCCCcceeccCChHHHhhCC
Confidence 6778999999996 889886433 55 4468999999999888755433211 10 1
Q ss_pred CceEEEECCCCHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHh
Q 003962 682 GKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEEKYTWKIYSQRLLTLTGVY 745 (783)
Q Consensus 682 g~~G~li~p~d~e~lAeaI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~~~a~~ll~ly~~~ 745 (783)
.-.-+.++-+|.+++-+||.+++. .+- --++--.||-+.+.+++-.+.+.-
T Consensus 406 ~PhVytVd~~n~~~v~~Avk~il~----~~v---------~Py~P~efT~egmLeRv~~~ie~q 456 (559)
T PF15024_consen 406 EPHVYTVDINNSTEVEAAVKAILA----TPV---------EPYLPYEFTCEGMLERVNALIEKQ 456 (559)
T ss_pred CCeEEEEcCCCHHHHHHHHHHHHh----cCC---------CCcCCcccCHHHHHHHHHHHHHhh
Confidence 124577888999999999987773 221 123345688888888887776643
No 218
>TIGR00715 precor6x_red precorrin-6x reductase. This enzyme was found to be a monomer by gel filtration.
Probab=36.12 E-value=1.4e+02 Score=31.83 Aligned_cols=54 Identities=17% Similarity=0.004 Sum_probs=32.0
Q ss_pred CcEEEeCCCCC--CCcHHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHHHHHHHHHH
Q 003962 641 KGAFVQPALYE--AFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVD 702 (783)
Q Consensus 641 advfV~PS~~E--~fGltvlEAMa~GlPVVat~~GG~~EiI~dg~~G~li~p~d~e~lAeaI~~ 702 (783)
+|++|.=-.-+ ++--++--|+.+|+|||.-+.+-... + +-.+ .+.+++.+.+.+
T Consensus 198 i~~lVtK~SG~~Gg~~eKi~AA~~lgi~vivI~RP~~~~----~--~~~~--~~~~el~~~l~~ 253 (256)
T TIGR00715 198 IDAVVTKASGEQGGELEKVKAAEALGINVIRIARPQTIP----G--VAIF--DDISQLNQFVAR 253 (256)
T ss_pred CCEEEEcCCCCccchHHHHHHHHHcCCcEEEEeCCCCCC----C--CccC--CCHHHHHHHHHH
Confidence 55666532222 45567888999999999987764211 1 1122 367776666643
No 219
>PLN00016 RNA-binding protein; Provisional
Probab=35.81 E-value=35 Score=38.14 Aligned_cols=20 Identities=20% Similarity=0.287 Sum_probs=16.3
Q ss_pred HHHHHHHHCCCceeeceeEEeCCC
Q 003962 294 EMLLRIKQQGLDITPQILIITRLL 317 (783)
Q Consensus 294 eLa~~L~~~GheV~~~i~VvT~~~ 317 (783)
.|++.|.++||+|+ ++++..
T Consensus 71 ~lv~~L~~~G~~V~----~l~R~~ 90 (378)
T PLN00016 71 YLAKELVKAGHEVT----LFTRGK 90 (378)
T ss_pred HHHHHHHHCCCEEE----EEecCC
Confidence 56677889999999 888864
No 220
>PF10649 DUF2478: Protein of unknown function (DUF2478); InterPro: IPR018912 This is a family of hypothetical bacterial proteins encoded in the vicinity of molybdenum ABC transporter gene-products MobA, MobB and MobC. However the function could not be confirmed.
Probab=35.71 E-value=67 Score=31.79 Aligned_cols=40 Identities=20% Similarity=0.429 Sum_probs=30.0
Q ss_pred HHHHHHHccCcEEEeCCC----CCCCcH--HHHHHHHcCCcEEEcC
Q 003962 632 ELYRYICDTKGAFVQPAL----YEAFGL--TVVEAMTCGLPTFATC 671 (783)
Q Consensus 632 el~~~ia~aadvfV~PS~----~E~fGl--tvlEAMa~GlPVVat~ 671 (783)
.+.+.+.+.+|++|+--+ .|+-|+ .+.+|++.|+||+++-
T Consensus 85 ~l~~al~~~~DLlivNkFGk~Ea~G~Glr~~i~~A~~~giPVLt~V 130 (159)
T PF10649_consen 85 ALRRALAEGADLLIVNKFGKQEAEGRGLRDEIAAALAAGIPVLTAV 130 (159)
T ss_pred HHHHHHhcCCCEEEEcccHHhhhcCCCHHHHHHHHHHCCCCEEEEE
Confidence 345566667888888655 455665 5899999999999973
No 221
>PRK04020 rps2P 30S ribosomal protein S2; Provisional
Probab=35.61 E-value=2.6e+02 Score=28.89 Aligned_cols=150 Identities=17% Similarity=0.110 Sum_probs=78.5
Q ss_pred cCCCCHHHHHHHHHHhHccCCCeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHHcCCC-CcEEEccCCCCcCChHHHHHH
Q 003962 558 DRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLN-GQFRWISSQMNRVRNGELYRY 636 (783)
Q Consensus 558 ~~~Kgl~~LieA~~~l~~~~~~~~LvIVG~g~~~~~~~~ee~~~~~~l~~li~~~~L~-~~V~flG~~~~~~~~~el~~~ 636 (783)
+..|=+..|..|+.-+... ..-++++||..+. ..+.+++.++..+.. -+=+|+| +...+..+-.+
T Consensus 47 dL~kT~~~L~~A~~~i~~~-~~~~ILfVgTk~~----------~~~~v~k~A~~~g~~~v~~RWlg---G~LTN~~~~~~ 112 (204)
T PRK04020 47 DVRKTDERIRIAAKFLSRY-EPEKILVVSSRQY----------GQKPVQKFAEVVGAKAITGRFIP---GTLTNPSLKGY 112 (204)
T ss_pred cHHHHHHHHHHHHHHHHHh-cCCeEEEEeCCHH----------HHHHHHHHHHHhCCeeecCccCC---CcCcCcchhcc
Confidence 3345556666666665554 3457888998753 123445555555432 1126887 22222233222
Q ss_pred HHccCcEEEeCCCCCCCcHHHHHHHHcCCcEEEc-CccccccccccCceEEEECCCC-HHHHHHHHHHHHHHhhCCHHHH
Q 003962 637 ICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFAT-CKGGPAEIIVNGKSGYHIDPYH-GEQAAEILVDFFEKCKADPSYW 714 (783)
Q Consensus 637 ia~aadvfV~PS~~E~fGltvlEAMa~GlPVVat-~~GG~~EiI~dg~~G~li~p~d-~e~lAeaI~~~l~~l~~dp~~~ 714 (783)
+ .-|+.+..... .-..++.||.-.|.|||+- |+-..++.| -+.++.+| .-.....+..++ .+
T Consensus 113 ~--~Pdliiv~dp~-~~~~AI~EA~kl~IP~IaivDTn~dp~~V-----dypIP~Ndds~~SI~li~~ll----~~---- 176 (204)
T PRK04020 113 I--EPDVVVVTDPR-GDAQAVKEAIEVGIPVVALCDTDNLTSNV-----DLVIPTNNKGRKALALVYWLL----AR---- 176 (204)
T ss_pred C--CCCEEEEECCc-ccHHHHHHHHHhCCCEEEEEeCCCCcccC-----ceeECCCCchHHHHHHHHHHH----HH----
Confidence 2 13444443221 1256899999999999995 666666665 44565443 333333343333 11
Q ss_pred HHHHHHHHHHHHHhCCHHHHHHHHH
Q 003962 715 DKISLGGLKRIEEKYTWKIYSQRLL 739 (783)
Q Consensus 715 ~~ms~~a~~~v~~~ysw~~~a~~ll 739 (783)
....++..+.+.-.|+...+.++
T Consensus 177 --aIl~~kg~~~~~~~~~v~~~~f~ 199 (204)
T PRK04020 177 --EILRERGEIKPDEDLPVPVEDFE 199 (204)
T ss_pred --HHHHhhCccCCCCCCCcCHHHHh
Confidence 11223333455566766665554
No 222
>COG0496 SurE Predicted acid phosphatase [General function prediction only]
Probab=34.92 E-value=2.5e+02 Score=29.96 Aligned_cols=35 Identities=31% Similarity=0.558 Sum_probs=23.6
Q ss_pred CCceEEEE--cC----C-----CchHHHHHHHHhcCCcEEEEecCC
Q 003962 382 GKPDLIIG--NY----S-----DGNIVASLLAHKLGVTQCTIAHAL 416 (783)
Q Consensus 382 ~~pDIIh~--h~----~-----~~~lva~llar~lgvp~v~t~H~l 416 (783)
.+||+|.+ |. . -|...|++=+..+|+|-|..-+..
T Consensus 82 ~~pDLVvSGIN~G~Nlg~dv~ySGTVaaA~Ea~~~GipsIA~S~~~ 127 (252)
T COG0496 82 PRPDLVVSGINAGANLGDDVIYSGTVAAAMEAALLGIPAIAISLAY 127 (252)
T ss_pred CCCCEEEeCccCCCccccceeeeehHHHHHHHHHcCccceeeeehh
Confidence 34999995 11 1 134566667788999998877754
No 223
>PRK13933 stationary phase survival protein SurE; Provisional
Probab=34.92 E-value=5.1e+02 Score=27.69 Aligned_cols=35 Identities=17% Similarity=0.319 Sum_probs=22.6
Q ss_pred cCCCceEEEE--cC----C-----CchHHHHHHHHhcCCcEEEEec
Q 003962 380 LQGKPDLIIG--NY----S-----DGNIVASLLAHKLGVTQCTIAH 414 (783)
Q Consensus 380 l~~~pDIIh~--h~----~-----~~~lva~llar~lgvp~v~t~H 414 (783)
+..+||+|++ |. . -|...|++-+...|+|-+..-.
T Consensus 84 ~~~~pDLVvSGIN~G~N~g~dv~ySGTVgAA~ea~~~GiPsiA~S~ 129 (253)
T PRK13933 84 VPDNIDMVISGINKGLNIGNDILYSGTVSAAIEGAIYKVPSIAVSA 129 (253)
T ss_pred cCCCCCEEEECCcCCCCCCcCCccchhHHHHHHHHHcCCCeEEEEe
Confidence 3568999995 11 1 1235566667788999886554
No 224
>PRK13935 stationary phase survival protein SurE; Provisional
Probab=34.63 E-value=6e+02 Score=27.16 Aligned_cols=35 Identities=29% Similarity=0.486 Sum_probs=22.5
Q ss_pred cCCCceEEEE--cC----C-----CchHHHHHHHHhcCCcEEEEec
Q 003962 380 LQGKPDLIIG--NY----S-----DGNIVASLLAHKLGVTQCTIAH 414 (783)
Q Consensus 380 l~~~pDIIh~--h~----~-----~~~lva~llar~lgvp~v~t~H 414 (783)
+..+||+|++ |. . -|...|+.-+...|+|-+..-.
T Consensus 83 ~~~~pDLVvSGIN~G~N~g~~v~ySGTVgAA~ea~~~GiPaiA~S~ 128 (253)
T PRK13935 83 MDKKVDLVISGINRGPNLGTDVLYSGTVSGALEGAMMGVPSIAISS 128 (253)
T ss_pred ccCCCCEEEeCCccCCCCCcCCcccHhHHHHHHHHhcCCCeEEEEc
Confidence 3468999995 11 1 1234566667778999887665
No 225
>PRK03359 putative electron transfer flavoprotein FixA; Reviewed
Probab=34.63 E-value=1.4e+02 Score=31.85 Aligned_cols=34 Identities=24% Similarity=0.240 Sum_probs=25.9
Q ss_pred CceEEEE--cCCC--chHHHHHHHHhcCCcEEEEecCC
Q 003962 383 KPDLIIG--NYSD--GNIVASLLAHKLGVTQCTIAHAL 416 (783)
Q Consensus 383 ~pDIIh~--h~~~--~~lva~llar~lgvp~v~t~H~l 416 (783)
.||+|.| ...+ .+.++..+|..+|+|++..+-.+
T Consensus 112 ~~DLVl~G~~s~D~~tgqvg~~lAe~Lg~P~vt~v~~l 149 (256)
T PRK03359 112 GFDLILCGDGSSDLYAQQVGLLVGEILNIPAINGVSKI 149 (256)
T ss_pred CCCEEEEcCccccCCCCcHHHHHHHHhCCCceeeEEEE
Confidence 4999996 2233 37899999999999988766543
No 226
>PRK10840 transcriptional regulator RcsB; Provisional
Probab=34.46 E-value=4.9e+02 Score=26.08 Aligned_cols=110 Identities=9% Similarity=0.114 Sum_probs=64.7
Q ss_pred CeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHHcCCCCcEEEccCCCCcCChHHHHHHHHc-cCcEEEeCCCCCC----C
Q 003962 579 LVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICD-TKGAFVQPALYEA----F 653 (783)
Q Consensus 579 ~~~LvIVG~g~~~~~~~~ee~~~~~~l~~li~~~~L~~~V~flG~~~~~~~~~el~~~ia~-aadvfV~PS~~E~----f 653 (783)
+.+++|+.+.+. ....+....+..+ .+..++. ..+..+....+.. ..|++++-....+ .
T Consensus 3 ~~~Ilivdd~~~----------~~~~l~~~L~~~~---~~~~v~~---~~~~~~~~~~~~~~~~DlvllD~~l~~~~~~~ 66 (216)
T PRK10840 3 NMNVIIADDHPI----------VLFGIRKSLEQIE---WVNVVGE---FEDSTALINNLPKLDAHVLITDLSMPGDKYGD 66 (216)
T ss_pred ceEEEEECCcHH----------HHHHHHHHHhcCC---CCEEEEE---ECCHHHHHHHHHhCCCCEEEEeCcCCCCCCCC
Confidence 356777777642 2234445544332 2222221 1123455555542 3688877543332 5
Q ss_pred cHHHHHHHH---cCCcEEE-cCcccc---ccccccCceEEEECCCCHHHHHHHHHHHH
Q 003962 654 GLTVVEAMT---CGLPTFA-TCKGGP---AEIIVNGKSGYHIDPYHGEQAAEILVDFF 704 (783)
Q Consensus 654 GltvlEAMa---~GlPVVa-t~~GG~---~EiI~dg~~G~li~p~d~e~lAeaI~~~l 704 (783)
|+.+++.+. .++|+|+ |..... .+.++.|..||+..|.+++++.++|....
T Consensus 67 g~~~~~~l~~~~~~~~iIvls~~~~~~~~~~a~~~Ga~~yl~K~~~~~~l~~ai~~v~ 124 (216)
T PRK10840 67 GITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAALQ 124 (216)
T ss_pred HHHHHHHHHHHCCCCcEEEEEecCCHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHHH
Confidence 777777764 3467776 333322 34467799999999999999999997655
No 227
>PRK12342 hypothetical protein; Provisional
Probab=33.83 E-value=1.3e+02 Score=32.22 Aligned_cols=34 Identities=21% Similarity=0.198 Sum_probs=26.2
Q ss_pred CceEEEEc--CCC--chHHHHHHHHhcCCcEEEEecCC
Q 003962 383 KPDLIIGN--YSD--GNIVASLLAHKLGVTQCTIAHAL 416 (783)
Q Consensus 383 ~pDIIh~h--~~~--~~lva~llar~lgvp~v~t~H~l 416 (783)
.||+|.|- ..+ .+.++..+|..+|+|++..+..+
T Consensus 109 ~~DLVl~G~~s~D~~tgqvg~~lA~~Lg~P~vt~v~~~ 146 (254)
T PRK12342 109 GFDLLLFGEGSGDLYAQQVGLLLGELLQLPVINAVSKI 146 (254)
T ss_pred CCCEEEEcCCcccCCCCCHHHHHHHHhCCCcEeeEEEE
Confidence 49999962 233 37899999999999998777654
No 228
>TIGR03642 cas_csx13 CRISPR-associated protein, Csx13 family. This model describes a protein N-terminal protein sequence domain strictly associated with CRISPR and CRISPR-associated protein systems. This model and TIGR02584 identify two separate clades from a larger homology domain family, both CRISPR-associated, while other homologs are found that may not be. Members are found in bacteria that include Pelotomaculum thermopropionicum SI, Thermoanaerobacter tengcongensis MB4, and Roseiflexus sp. RS-1, and in archaea that include Thermoplasma volcanium, Picrophilus torridus, and Methanospirillum hungatei. The molecular function is unknown.
Probab=32.34 E-value=1.5e+02 Score=28.11 Aligned_cols=101 Identities=20% Similarity=0.193 Sum_probs=49.8
Q ss_pred HHHHHHHHCCCceeeceeEEeCCCCCCC-CCcccceeeeecCccCeEEEEeccCCCccccccccccccchhhHHHHHHHH
Q 003962 294 EMLLRIKQQGLDITPQILIITRLLPDAV-GTTCGQRLEKVYGTKYSDILRVPFRTEKGVVRKWISRFEVWPYLETYTEDV 372 (783)
Q Consensus 294 eLa~~L~~~GheV~~~i~VvT~~~~~~~-g~~~~~~~e~i~~~~~v~Ilrvp~~~~~~~~~~~isr~~i~~~l~~f~~~~ 372 (783)
|...+|.++|..++ .|.+++...+... |..-- ..+-.......+|+.++.. ... ..-..-.+.+...+
T Consensus 9 Etl~aL~~~g~~i~-ev~lI~T~~~~v~~~~~~l-~~~l~~~~~~~~i~~i~~~-~~D--------I~t~~d~~~~~~~I 77 (124)
T TIGR03642 9 EAIDYLKKKGEPIS-DVILIYTKDPYVLSALRAL-KDSLLKKFYKAEVHKIPLK-FDD--------ILSDEDILTFMSIA 77 (124)
T ss_pred HHHHHHHhcCCCCC-eEEEEEcCCHHHHHHHHHH-HHHhHHhcCCcEEEEeccC-ccc--------cCCHHHHHHHHHHH
Confidence 66778899999865 4556665433211 10000 0000011123455554432 111 11222234555544
Q ss_pred HHHHHHHcCCCce--EEEEcCCCc----hHHHHHHHHhcC
Q 003962 373 AVEIAKELQGKPD--LIIGNYSDG----NIVASLLAHKLG 406 (783)
Q Consensus 373 ~~~l~~~l~~~pD--IIh~h~~~~----~lva~llar~lg 406 (783)
.+.+.. +..+++ -+|.+-+.| +..+.+++..+|
T Consensus 78 ~~~i~~-l~~~~~~~~lh~~iaGGRK~Ms~~~~~a~sl~g 116 (124)
T TIGR03642 78 AKEVKK-ERENYGCERIIVNISGGRKIMTIILALYAQLLF 116 (124)
T ss_pred HHHHHH-HhhCCCcceEEEEecCCHHHHHHHHHHHHHHhC
Confidence 444443 344666 699888876 567777777766
No 229
>cd01020 TroA_b Metal binding protein TroA_b. These proteins are predicted to function as initial receptors in ABC transport of metal ions. They belong to the TroA superfamily of helical backbone metal receptor proteins that share a distinct fold and ligand binding mechanism. A typical TroA protein is comprised of two globular subdomains connected by a single helix and can bind the metal ion in the cleft between these domains. In addition, these proteins sometimes have a low complexity region containing a metal-binding histidine-rich motif (repetitive HDH sequence).
Probab=31.76 E-value=2.3e+02 Score=30.10 Aligned_cols=101 Identities=16% Similarity=0.130 Sum_probs=62.9
Q ss_pred HHHHHHccCcEEEeCCC-CCCCcHHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHHHHHHHHHHHHHHhhCCH
Q 003962 633 LYRYICDTKGAFVQPAL-YEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADP 711 (783)
Q Consensus 633 l~~~ia~aadvfV~PS~-~E~fGltvlEAMa~GlPVVat~~GG~~EiI~dg~~G~li~p~d~e~lAeaI~~~l~~l~~dp 711 (783)
-...+.+ ||++|.--. +|++=-.+++.+ .+.++++...++..+- .+..--++.+|.+...+++.|.+.|. ..||
T Consensus 46 d~~~l~~-ADliv~~G~~lE~~~~k~~~~~-~~~~v~~~~~~~~~~~-~~~dPH~Wldp~n~~~~a~~I~~~L~--~~dP 120 (264)
T cd01020 46 DAAKVST-ADIVVYNGGGYDPWMTKLLADT-KDVIVIAADLDGHDDK-EGDNPHLWYDPETMSKVANALADALV--KADP 120 (264)
T ss_pred HHHHHhh-CCEEEEeCCCchHHHHHHHHhc-CCceEEeeecccccCC-CCCCCceecCHhHHHHHHHHHHHHHH--HhCc
Confidence 3445664 888887543 566555566655 4556666544432110 11244578899999999999999884 3688
Q ss_pred HHHHHHHHHHHHHHHHhCCHHHHHHHHHHH
Q 003962 712 SYWDKISLGGLKRIEEKYTWKIYSQRLLTL 741 (783)
Q Consensus 712 ~~~~~ms~~a~~~v~~~ysw~~~a~~ll~l 741 (783)
+..+...+|+.+...+ ++..-+++.+.
T Consensus 121 ~~~~~y~~N~~~~~~~---l~~l~~~~~~~ 147 (264)
T cd01020 121 DNKKYYQANAKKFVAS---LKPLAAKIAEL 147 (264)
T ss_pred ccHHHHHHHHHHHHHH---HHHHHHHHHHH
Confidence 8888888888877643 33343444443
No 230
>PRK06988 putative formyltransferase; Provisional
Probab=30.57 E-value=2.7e+02 Score=30.60 Aligned_cols=13 Identities=23% Similarity=0.470 Sum_probs=9.1
Q ss_pred HHHHHHHCCCcee
Q 003962 295 MLLRIKQQGLDIT 307 (783)
Q Consensus 295 La~~L~~~GheV~ 307 (783)
..+.|.+.|++|.
T Consensus 17 ~L~~L~~~~~~i~ 29 (312)
T PRK06988 17 CLQVLLARGVDVA 29 (312)
T ss_pred HHHHHHhCCCCEE
Confidence 3455677899876
No 231
>PF03033 Glyco_transf_28: Glycosyltransferase family 28 N-terminal domain; InterPro: IPR004276 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 28 GT28 from CAZY comprises enzymes with a number of known activities; 1,2-diacylglycerol 3-beta-galactosyltransferase (2.4.1.46 from EC); 1,2-diacylglycerol 3-beta-glucosyltransferase (2.4.1.157 from EC); beta-N-acetylglucosamine transferase (2.4.1 from EC).; GO: 0016758 transferase activity, transferring hexosyl groups, 0005975 carbohydrate metabolic process, 0030259 lipid glycosylation; PDB: 2IYF_B 2YJN_A 2P6P_A 1PNV_A 3H4T_A 3H4I_A 1PN3_B 3IA7_B 1NLM_B 1F0K_B ....
Probab=30.19 E-value=38 Score=31.55 Aligned_cols=21 Identities=24% Similarity=0.322 Sum_probs=15.5
Q ss_pred hHHHHHHHHhcCCcEEEEecC
Q 003962 395 NIVASLLAHKLGVTQCTIAHA 415 (783)
Q Consensus 395 ~lva~llar~lgvp~v~t~H~ 415 (783)
...+..++.++++|.+.....
T Consensus 110 ~~~~~~vaE~~~iP~~~~~~~ 130 (139)
T PF03033_consen 110 AFAAALVAEQLGIPGVANRLF 130 (139)
T ss_dssp HTHHHHHHHHHTS-EEEEESS
T ss_pred cCccceeEhhhCchHHHHhhC
Confidence 457788899999998876654
No 232
>COG2204 AtoC Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains [Signal transduction mechanisms]
Probab=29.04 E-value=6.7e+02 Score=29.29 Aligned_cols=108 Identities=14% Similarity=0.168 Sum_probs=72.3
Q ss_pred eEEEEEeCCCCCCCccHHHHHHHHHHHHHHHHcCCCCcEEEccCCCCcCChHHHHHHHHcc-CcEEEeCCC-CCCCcHHH
Q 003962 580 VNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDT-KGAFVQPAL-YEAFGLTV 657 (783)
Q Consensus 580 ~~LvIVG~g~~~~~~~~ee~~~~~~l~~li~~~~L~~~V~flG~~~~~~~~~el~~~ia~a-advfV~PS~-~E~fGltv 657 (783)
.++++|-+..+ ...-+.......|. .|+... +..+....+... .|+++.--+ -+.-|+.+
T Consensus 5 ~~iLvVDDd~~----------ir~~l~~~L~~~G~--~v~~a~------~~~~al~~i~~~~~~lvl~Di~mp~~~Gl~l 66 (464)
T COG2204 5 ARILVVDDDPD----------IRELLEQALELAGY--EVVTAE------SAEEALEALSESPFDLVLLDIRMPGMDGLEL 66 (464)
T ss_pred CCEEEEeCCHH----------HHHHHHHHHHHcCC--eEEEeC------CHHHHHHHHhcCCCCEEEEecCCCCCchHHH
Confidence 34677776642 33445555555552 354443 346677777654 356665433 36678988
Q ss_pred HHHHHc---CCcEEE-cCcccc---ccccccCceEEEECCCCHHHHHHHHHHHHH
Q 003962 658 VEAMTC---GLPTFA-TCKGGP---AEIIVNGKSGYHIDPYHGEQAAEILVDFFE 705 (783)
Q Consensus 658 lEAMa~---GlPVVa-t~~GG~---~EiI~dg~~G~li~p~d~e~lAeaI~~~l~ 705 (783)
++.+.. ++|||. |.+|.+ .+-++.|-.-|+..|-|++.+...+.+.++
T Consensus 67 l~~i~~~~~~~pVI~~Tg~g~i~~AV~A~k~GA~Dfl~KP~~~~~L~~~v~ral~ 121 (464)
T COG2204 67 LKEIKSRDPDLPVIVMTGHGDIDTAVEALRLGAFDFLEKPFDLDRLLAIVERALE 121 (464)
T ss_pred HHHHHhhCCCCCEEEEeCCCCHHHHHHHHhcCcceeeeCCCCHHHHHHHHHHHHH
Confidence 887766 799988 677775 445567878899999999999999988774
No 233
>PRK13934 stationary phase survival protein SurE; Provisional
Probab=29.02 E-value=7.6e+02 Score=26.62 Aligned_cols=34 Identities=29% Similarity=0.427 Sum_probs=21.6
Q ss_pred CCCceEEEE--cC----C------CchHHHHHHHHhcCCcEEEEec
Q 003962 381 QGKPDLIIG--NY----S------DGNIVASLLAHKLGVTQCTIAH 414 (783)
Q Consensus 381 ~~~pDIIh~--h~----~------~~~lva~llar~lgvp~v~t~H 414 (783)
..+||+|++ |. . -|...|++-+...|+|-+..-.
T Consensus 82 ~~~pDLViSGIN~G~NlG~d~v~ySGTVgAA~Ea~~~GIPsIAvS~ 127 (266)
T PRK13934 82 GRKYDLVLSGINLGDNTSLQVILSSGTLGAAFQAALLGIPAVAYSA 127 (266)
T ss_pred cCCCCeEEecCccCCCCCcCcccccHhHHHHHHHHhcCCCEEEEec
Confidence 457999994 11 1 1234556667778999876654
No 234
>COG1797 CobB Cobyrinic acid a,c-diamide synthase [Coenzyme metabolism]
Probab=28.69 E-value=2.4e+02 Score=32.55 Aligned_cols=62 Identities=19% Similarity=0.309 Sum_probs=37.1
Q ss_pred HHHHHHHHHHcCCCCcEEEccCCCCcCChHHHHHHHHccCcEEEeCCCC-C----------CCcHHHHHHHHcCCcEEEc
Q 003962 602 MKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALY-E----------AFGLTVVEAMTCGLPTFAT 670 (783)
Q Consensus 602 ~~~l~~li~~~~L~~~V~flG~~~~~~~~~el~~~ia~aadvfV~PS~~-E----------~fGltvlEAMa~GlPVVat 670 (783)
.++..++.++.| ..+.|.. ++..+++.. .+|++.+|-=| | .+=-.+-++.+.|+||.+-
T Consensus 260 Y~~nl~~Lr~~G--Aelv~FS----PL~D~~lP~----~~D~vYlgGGYPElfA~~L~~n~~~~~~i~~~~~~G~piyaE 329 (451)
T COG1797 260 YPENLELLREAG--AELVFFS----PLADEELPP----DVDAVYLGGGYPELFAEELSANESMRRAIKAFAAAGKPIYAE 329 (451)
T ss_pred cHHHHHHHHHCC--CEEEEeC----CcCCCCCCC----CCCEEEeCCCChHHHHHHHhhCHHHHHHHHHHHHcCCceEEe
Confidence 344444455554 3577776 455566664 47777776321 2 2334577778889999987
Q ss_pred Ccc
Q 003962 671 CKG 673 (783)
Q Consensus 671 ~~G 673 (783)
|-|
T Consensus 330 CGG 332 (451)
T COG1797 330 CGG 332 (451)
T ss_pred ccc
Confidence 654
No 235
>TIGR01568 A_thal_3678 uncharacterized plant-specific domain TIGR01568. This model describes an uncharacterized domain of about 70 residues found exclusively in plants, generally toward the C-terminus of proteins of 200 to 350 amino acids in length. At least 14 such proteins are found in Arabidopsis thaliana. Other regions of these proteins tend to consist largely of low-complexity sequence.
Probab=28.15 E-value=1e+02 Score=25.87 Aligned_cols=51 Identities=18% Similarity=0.335 Sum_probs=36.4
Q ss_pred CCCCchHHHHHhhhcCcccCCCCcHHHHHHHHHHHHHhhcCCChh--cHHHHhc
Q 003962 198 PETPFSELALRFQEIGLERGWGDTAERALEMIQLLLDLLEAPDPC--TLETFLG 249 (783)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~p~~~--~~~~f~~ 249 (783)
...||.+|+.-+++|=-|.|-+.+-+.+.|-+.-+.. +++|+.+ .+.+|..
T Consensus 7 S~DPy~DFr~SM~EMI~~~~i~~~w~~LeeLL~cYL~-LN~~~~H~~Iv~AF~d 59 (66)
T TIGR01568 7 SDDPYEDFRRSMEEMIEERELEADWKELEELLACYLD-LNPKKSHRFIVRAFVD 59 (66)
T ss_pred CCChHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHH-hCCchhhhHHHHHHHH
Confidence 5679999999999998888866554666666665554 5677644 5666653
No 236
>PRK05331 putative phosphate acyltransferase; Provisional
Probab=28.02 E-value=7.1e+02 Score=27.68 Aligned_cols=53 Identities=11% Similarity=0.067 Sum_probs=39.6
Q ss_pred cccCCCCHHHHHHHHHHhHccCCCeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHHcCCC-CcEEEcc
Q 003962 556 RLDRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLN-GQFRWIS 622 (783)
Q Consensus 556 RL~~~Kgl~~LieA~~~l~~~~~~~~LvIVG~g~~~~~~~~ee~~~~~~l~~li~~~~L~-~~V~flG 622 (783)
-+.-..+....++++.+..+..+++.++++|+. +++++.++++++. +++.++-
T Consensus 8 amGgD~~p~~vl~aa~~a~~~~~~~~~iLvG~~--------------~~I~~~l~~~~~~~~~~~Iv~ 61 (334)
T PRK05331 8 AMGGDFGPEVVVPGALQALKEHPDLEIILVGDE--------------EKIKPLLAKKPDLKERIEIVH 61 (334)
T ss_pred cCCCccCHHHHHHHHHHHHhcCCCeEEEEEeCH--------------HHHHHHHHhcCCCcCCcEEEe
Confidence 355688999999999988887778999999986 4566666666542 4566664
No 237
>COG2236 Predicted phosphoribosyltransferases [General function prediction only]
Probab=27.55 E-value=1.3e+02 Score=30.80 Aligned_cols=49 Identities=29% Similarity=0.398 Sum_probs=37.2
Q ss_pred chhhHHHHHHHHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHhcCCcEE
Q 003962 361 VWPYLETYTEDVAVEIAKELQGKPDLIIGNYSDGNIVASLLAHKLGVTQC 410 (783)
Q Consensus 361 i~~~l~~f~~~~~~~l~~~l~~~pDIIh~h~~~~~lva~llar~lgvp~v 410 (783)
.|..+......+..++.+. +.+||+|++-.-.|-..|.+++..+|++-+
T Consensus 8 Sw~~I~~~~~~lA~kI~~s-~~~PDvIiaiaRGG~~pariLsd~L~~~~l 56 (192)
T COG2236 8 SWEEIHRLCRALAEKIRAS-GFKPDVIVAIARGGLIPARILSDFLGVKPL 56 (192)
T ss_pred cHHHHHHHHHHHHHHHHHc-CCCCCEEEEEcCCceehHHHHHHHhCCCce
Confidence 4555666666666666653 578999999888887899999999998533
No 238
>PLN03228 methylthioalkylmalate synthase; Provisional
Probab=27.30 E-value=1.1e+03 Score=27.89 Aligned_cols=109 Identities=17% Similarity=0.297 Sum_probs=65.2
Q ss_pred ceeeeeccccccCCCCCCCCCCCCchhhhhhHhhhhhhcCCCCC----chh----HHHHHhhcccCCeeeecccC-CCCh
Q 003962 109 FVLELDFEPFNASFPRPTLSKSIGNGVEFLNRHLSAKLFHDKES----MHP----LLEFLRVHCHKGKNMMLNDR-IQNL 179 (783)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~----~~~~~~~~~~~~~~~~~~~~-~~~~ 179 (783)
.+.--.+=||-.++|.++..+.-|+ +=|-+--+|.++++.+. ..| .-+|+-.--.+-+.+.|.|. +.+.
T Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~I~DtTLRDG 95 (503)
T PLN03228 18 TVVGRSVLPIGSSLPSLRLTRPYGK--PTLFRSCCSSESKKVATSATDLKPIVERWPEYIPNKLPDKNYVRVLDTTLRDG 95 (503)
T ss_pred ceEEEeeeecccCCCcccccCCCCC--ccHHHHHHHHhhhccccccccccchhhcccccCCcccCCCCCeEEEeCCCCCC
Confidence 3444467799999999999988776 45667778888877632 433 33444433333444444443 4444
Q ss_pred HHHHHHHHHHHHHhhcCCCCCCc-----hHHHHHhhhcCc---ccCCCCcHHHHHHHHHHHHH
Q 003962 180 NSLQHVLRKAEEYLTTVVPETPF-----SELALRFQEIGL---ERGWGDTAERALEMIQLLLD 234 (783)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~---~~~~~~~~~r~~~~~~~~~~ 234 (783)
.| .+..+| -++...|.++|+ |-||-..-....+.++.+..
T Consensus 96 eQ---------------~~gv~fs~eeKi~Ia~~L~~~GVd~IEvG~Pa~s~~e~e~i~~i~~ 143 (503)
T PLN03228 96 EQ---------------SPGGSLTPPQKLEIARQLAKLRVDIMEVGFPGSSEEEFEAVKTIAK 143 (503)
T ss_pred CC---------------CCCCCCCHHHHHHHHHHHHHcCCCEEEEeCCCCCHHHHHHHHHHHH
Confidence 32 122222 245667888887 77886665555666665544
No 239
>COG4088 Predicted nucleotide kinase [Nucleotide transport and metabolism]
Probab=26.50 E-value=3.2e+02 Score=28.58 Aligned_cols=50 Identities=22% Similarity=0.258 Sum_probs=28.2
Q ss_pred hHHHHHHHHHHHHHHHcCCCceEEE--EcCCCc-hHHHHHHHHhcCCcEEEEec
Q 003962 364 YLETYTEDVAVEIAKELQGKPDLII--GNYSDG-NIVASLLAHKLGVTQCTIAH 414 (783)
Q Consensus 364 ~l~~f~~~~~~~l~~~l~~~pDIIh--~h~~~~-~lva~llar~lgvp~v~t~H 414 (783)
|.+.+.....+.+..+++ ..=||. .||..+ -.--...++.+.+|+|++.-
T Consensus 56 yres~~ks~~rlldSalk-n~~VIvDdtNYyksmRrqL~ceak~~~tt~ciIyl 108 (261)
T COG4088 56 YRESFLKSVERLLDSALK-NYLVIVDDTNYYKSMRRQLACEAKERKTTWCIIYL 108 (261)
T ss_pred HHHHHHHHHHHHHHHHhc-ceEEEEecccHHHHHHHHHHHHHHhcCCceEEEEE
Confidence 446666667776666655 232333 355544 12333456778899887654
No 240
>TIGR02990 ectoine_eutA ectoine utilization protein EutA. Members of this protein family are EutA, a predicted arylmalonate decarboxylase found in a conserved ectoine utilization operon of species that include Sinorhizobium meliloti 1021 (where it is known to be induced by ectoine), Mesorhizobium loti and Silicibacter pomeroyi. It is missing from two other species with the other ectoine transport and utilization genes: Pseudomonas putida and Agrobacterium tumefaciens.
Probab=25.60 E-value=4.5e+02 Score=27.71 Aligned_cols=33 Identities=12% Similarity=0.122 Sum_probs=20.2
Q ss_pred CCceEEE--EcCCCchHHHHHHHHhcCCcEEEEec
Q 003962 382 GKPDLII--GNYSDGNIVASLLAHKLGVTQCTIAH 414 (783)
Q Consensus 382 ~~pDIIh--~h~~~~~lva~llar~lgvp~v~t~H 414 (783)
..+|.|. |......-+...+-+.+|+|++..-.
T Consensus 180 ~~aDAifisCTnLrt~~vi~~lE~~lGkPVlsSNq 214 (239)
T TIGR02990 180 PDADALFLSCTALRAATCAQRIEQAIGKPVVTSNQ 214 (239)
T ss_pred CCCCEEEEeCCCchhHHHHHHHHHHHCCCEEEHHH
Confidence 4678776 33333334555566779999876444
No 241
>TIGR00732 dprA DNA protecting protein DprA. Disruption of this gene in both Haemophilus influenzae and Helicobacter pylori drastically reduces the efficiency of transformation with exogenous DNA, but with different levels of effect on chromosomal (linear) and plasmid (circular) DNA. This difference suggests the DprA is not active in recombination, and it has been shown not to affect DNA binding, leaving the intermediate step in natural transformation, DNA processing. In Strep. pneumoniae, inactivation of dprA had no effect on the uptake of DNA. All of these data indicated that DprA is required at a later stage in transformation. Subsequently DprA and RecA were both shown in S. pneumoniae to be required to protect incoming ssDNA from immediate degradation. Role of DprA in non-transformable species is not known. The gene symbol smf was assigned in E. coli, but without assignment of function.
Probab=25.58 E-value=6e+02 Score=26.38 Aligned_cols=124 Identities=15% Similarity=0.130 Sum_probs=62.6
Q ss_pred CCCHHHHHHHHHHhHccCCCeEEEEEeCCCCC-CCccHHHHHHHHHHHHHHHHcC-CCCcEE-Ec-cCCCCcCChHHHHH
Q 003962 560 VKNLTGLVEWYGKNAKLRELVNLVVVGGDRRK-ESKDLEEQAEMKKMYSLIDQYK-LNGQFR-WI-SSQMNRVRNGELYR 635 (783)
Q Consensus 560 ~Kgl~~LieA~~~l~~~~~~~~LvIVG~g~~~-~~~~~ee~~~~~~l~~li~~~~-L~~~V~-fl-G~~~~~~~~~el~~ 635 (783)
.+|++..+.-.+.-. ....+.|+|.|.+. +. .+-.++.+.+.+.+ + -+. |. +....+.....--+
T Consensus 82 A~GiD~~ah~~al~~---~g~tIaVl~~gld~~yp------~~n~~l~~~i~~~ggl--liSe~p~~~~~~~~~f~~RNr 150 (220)
T TIGR00732 82 ALGIDGIAHKAALKV---NGRTIAVLGTGLDQIYP------RQNSKLAAKIAENGGL--LLSEYPPDTKPIKYNFPKRNR 150 (220)
T ss_pred hhhHHHHHHHHHHHc---CCCEEEEECCCCccCCc------hhhHHHHHHHHHcCCE--EEEecCCCCCCCcccHHHHHH
Confidence 678888776554432 24567777877652 11 11233333333333 1 000 00 11000111112234
Q ss_pred HHHccCcEEEeCCCCCCCc--HHHHHHHHcCCcEEEcC-------ccccccccccCceEEEECCCCHHHHHH
Q 003962 636 YICDTKGAFVQPALYEAFG--LTVVEAMTCGLPTFATC-------KGGPAEIIVNGKSGYHIDPYHGEQAAE 698 (783)
Q Consensus 636 ~ia~aadvfV~PS~~E~fG--ltvlEAMa~GlPVVat~-------~GG~~EiI~dg~~G~li~p~d~e~lAe 698 (783)
+++..++..|...-.+..| .++-.|+..|+||++-. ..|+..+|++| ...+. +++++.+
T Consensus 151 iia~ls~~vivve~~~~sGtl~ta~~A~~~gr~v~~~pg~~~~~~~~G~~~Li~~G-A~~i~---~~~d~~~ 218 (220)
T TIGR00732 151 IISGLSRAVLVVEAPLKSGALITARYALEQGREVFAYPGDLNSPESDGCHKLIEQG-AALIT---SAKDILE 218 (220)
T ss_pred HHHHhcCEEEEEECCCCCchHHHHHHHHHhCCcEEEEcCCCCCccchHHHHHHHCC-CEEEC---CHHHHHH
Confidence 4443455555443334444 57888999999999972 24677888887 33333 5565543
No 242
>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase
Probab=25.29 E-value=62 Score=36.59 Aligned_cols=52 Identities=15% Similarity=0.352 Sum_probs=37.0
Q ss_pred cCCChhcHHHHhccCCCcceEEEEcccccccccCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHHCCCceeeceeEEeCC
Q 003962 237 EAPDPCTLETFLGRIPMVFNVVILTPHGYFAQDDVLGYPDTGGQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRL 316 (783)
Q Consensus 237 ~~p~~~~~~~f~~~~pm~~rI~iis~h~~~~~~~~lg~p~tGG~~vyv~d~araL~~eLa~~L~~~GheV~~~i~VvT~~ 316 (783)
.+|.+..-..|-+..+.-|||+|+...|+.| . .+++.|.++|++|. ++++.
T Consensus 43 ~~~~~~~~~~~~~~~~~~~kVLVtGatG~IG--------------~-----------~l~~~Ll~~G~~V~----~l~R~ 93 (390)
T PLN02657 43 RATAAAAAQSFRSKEPKDVTVLVVGATGYIG--------------K-----------FVVRELVRRGYNVV----AVARE 93 (390)
T ss_pred cCCCccccccccccCCCCCEEEEECCCcHHH--------------H-----------HHHHHHHHCCCEEE----EEEec
Confidence 4556666667777777788998887655532 2 45567888999998 88775
Q ss_pred C
Q 003962 317 L 317 (783)
Q Consensus 317 ~ 317 (783)
.
T Consensus 94 ~ 94 (390)
T PLN02657 94 K 94 (390)
T ss_pred h
Confidence 3
No 243
>PF02601 Exonuc_VII_L: Exonuclease VII, large subunit; InterPro: IPR020579 Exonuclease VII 3.1.11.6 from EC is composed of two nonidentical subunits; one large subunit and 4 small ones []. Exonuclease VII catalyses exonucleolytic cleavage in either 5'-3' or 3'-5' direction to yield 5'-phosphomononucleotides. The large subunit also contains the OB-fold domains (IPR004365 from INTERPRO) that bind to nucleic acids at the N terminus. This entry represents Exonuclease VII, large subunit, C-terminal. ; GO: 0008855 exodeoxyribonuclease VII activity
Probab=25.22 E-value=9e+02 Score=26.25 Aligned_cols=42 Identities=17% Similarity=0.163 Sum_probs=29.5
Q ss_pred CCcEEEEEecccCCCCHHHHHHHHHHhHccC----CCeEEEEEeCC
Q 003962 547 NKPILFTMARLDRVKNLTGLVEWYGKNAKLR----ELVNLVVVGGD 588 (783)
Q Consensus 547 ~k~iIl~vGRL~~~Kgl~~LieA~~~l~~~~----~~~~LvIVG~g 588 (783)
.-.+.+|-..+-...-...+++|+..+.... .|+-+++=|||
T Consensus 41 ~~~~~~~p~~vQG~~A~~~I~~al~~~~~~~~~~~~Dviii~RGGG 86 (319)
T PF02601_consen 41 IVEIILYPASVQGEGAAASIVSALRKANEMGQADDFDVIIIIRGGG 86 (319)
T ss_pred CcEEEEEeccccccchHHHHHHHHHHHHhccccccccEEEEecCCC
Confidence 3457888888877777888999998886643 34444444555
No 244
>CHL00194 ycf39 Ycf39; Provisional
Probab=24.87 E-value=62 Score=35.15 Aligned_cols=33 Identities=9% Similarity=0.389 Sum_probs=25.0
Q ss_pred ceEEEEcccccccccCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHHCCCceeeceeEEeCC
Q 003962 255 FNVVILTPHGYFAQDDVLGYPDTGGQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRL 316 (783)
Q Consensus 255 ~rI~iis~h~~~~~~~~lg~p~tGG~~vyv~d~araL~~eLa~~L~~~GheV~~~i~VvT~~ 316 (783)
|||+|....|+.|. .+++.|.++||+|. +++|.
T Consensus 1 MkIlVtGatG~iG~-------------------------~lv~~Ll~~g~~V~----~l~R~ 33 (317)
T CHL00194 1 MSLLVIGATGTLGR-------------------------QIVRQALDEGYQVR----CLVRN 33 (317)
T ss_pred CEEEEECCCcHHHH-------------------------HHHHHHHHCCCeEE----EEEcC
Confidence 68888887776431 45667789999999 88875
No 245
>PF04844 Ovate: Transcriptional repressor, ovate; InterPro: IPR006458 This group of sequences contain an uncharacterised domain of about 70 residues found exclusively in plants, generally toward the C terminus of proteins of 200 to 350 amino acids in length. At least 14 such proteins are found in Arabidopsis thaliana (Mouse-ear cress). Other regions of these proteins tend to consist largely of low-complexity sequence. Function is not known.
Probab=24.55 E-value=1.2e+02 Score=24.86 Aligned_cols=49 Identities=20% Similarity=0.381 Sum_probs=35.7
Q ss_pred CCCchHHHHHhhhcCcccCCCCcHHHHHHHHHHHHHhhcCCChh--cHHHHhc
Q 003962 199 ETPFSELALRFQEIGLERGWGDTAERALEMIQLLLDLLEAPDPC--TLETFLG 249 (783)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~p~~~--~~~~f~~ 249 (783)
..||.+|+.-+++|=-|+|-. +.+.+.|-+.-+.. |++|+.+ .+++|..
T Consensus 2 ~DP~~DFr~SM~EMI~~~~i~-~~~~LeeLL~cYL~-LN~~~~H~~Iv~aF~d 52 (59)
T PF04844_consen 2 SDPYEDFRESMVEMIEENGIR-DWDDLEELLACYLS-LNSPEHHKFIVEAFVD 52 (59)
T ss_pred CCHHHHHHHHHHHHHHHcCCC-CHHHHHHHHHHHHH-hCChhhhhHHHHHHHH
Confidence 469999999999999999988 55666666665554 6677644 4666653
No 246
>COG1519 KdtA 3-deoxy-D-manno-octulosonic-acid transferase [Cell envelope biogenesis, outer membrane]
Probab=24.41 E-value=5.4e+02 Score=29.54 Aligned_cols=102 Identities=10% Similarity=0.003 Sum_probs=64.2
Q ss_pred cEEEEEecccCCCCHHHHHHHHHHhHccCCCeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHHcCCCCcEEEccCCCCcC
Q 003962 549 PILFTMARLDRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRV 628 (783)
Q Consensus 549 ~iIl~vGRL~~~Kgl~~LieA~~~l~~~~~~~~LvIVG~g~~~~~~~~ee~~~~~~l~~li~~~~L~~~V~flG~~~~~~ 628 (783)
.+.+..++.++..-..-|++++ ++.+|++++++.-..+. ..+...+.++-.-.+.++.. -
T Consensus 51 ~vWiHaaSVGEv~a~~pLv~~l---~~~~P~~~ilvTt~T~T-------------g~e~a~~~~~~~v~h~YlP~----D 110 (419)
T COG1519 51 LVWIHAASVGEVLAALPLVRAL---RERFPDLRILVTTMTPT-------------GAERAAALFGDSVIHQYLPL----D 110 (419)
T ss_pred eEEEEecchhHHHHHHHHHHHH---HHhCCCCCEEEEecCcc-------------HHHHHHHHcCCCeEEEecCc----C
Confidence 4567788888877777777665 55679999998886654 12233344443345666652 1
Q ss_pred ChHHHHHHHHc-cCcEEEeCCCCCCCcHHHHHHHHcCCcEEEcC
Q 003962 629 RNGELYRYICD-TKGAFVQPALYEAFGLTVVEAMTCGLPTFATC 671 (783)
Q Consensus 629 ~~~el~~~ia~-aadvfV~PS~~E~fGltvlEAMa~GlPVVat~ 671 (783)
...-+-+.++. .-|+.|+- -.|=+|+++.|+-..|+|++--|
T Consensus 111 ~~~~v~rFl~~~~P~l~Ii~-EtElWPnli~e~~~~~~p~~LvN 153 (419)
T COG1519 111 LPIAVRRFLRKWRPKLLIIM-ETELWPNLINELKRRGIPLVLVN 153 (419)
T ss_pred chHHHHHHHHhcCCCEEEEE-eccccHHHHHHHHHcCCCEEEEe
Confidence 22333444422 23444432 34779999999999999998754
No 247
>PF10649 DUF2478: Protein of unknown function (DUF2478); InterPro: IPR018912 This is a family of hypothetical bacterial proteins encoded in the vicinity of molybdenum ABC transporter gene-products MobA, MobB and MobC. However the function could not be confirmed.
Probab=23.62 E-value=7.3e+02 Score=24.59 Aligned_cols=108 Identities=17% Similarity=0.254 Sum_probs=55.5
Q ss_pred HHHHHHHHCCCceeeceeEEeCCCCCCCCCcccceeeeecCccCeEEEEeccCCCccccccccccccchhhHHHHHHHHH
Q 003962 294 EMLLRIKQQGLDITPQILIITRLLPDAVGTTCGQRLEKVYGTKYSDILRVPFRTEKGVVRKWISRFEVWPYLETYTEDVA 373 (783)
Q Consensus 294 eLa~~L~~~GheV~~~i~VvT~~~~~~~g~~~~~~~e~i~~~~~v~Ilrvp~~~~~~~~~~~isr~~i~~~l~~f~~~~~ 373 (783)
+.+.+|..+|+.|.. ++-+..+...+..|.-.++.+.....+.|.. ..++. ...-.+-|- -...+.
T Consensus 18 ~~a~~L~~~G~rv~G---~vQ~~~~~~~~~~~~m~l~dl~~G~~~~IsQ-~LG~g-------s~gCrLD~~---~La~A~ 83 (159)
T PF10649_consen 18 AFAARLRARGVRVAG---LVQRNTADGDGGRCDMDLRDLPSGRRIRISQ-DLGPG-------SRGCRLDPG---ALAEAS 83 (159)
T ss_pred HHHHHHHhCCCeEEE---EeccccCCCCCCccceEEEECCCCCEEEEee-ccCCC-------CcccccCHH---HHHHHH
Confidence 667778999999872 2222223334444555555554422222221 11110 111112111 122334
Q ss_pred HHHHHHcCCCceEEEEcCCC-----c-hHHHHHH-HHhcCCcEEEEecC
Q 003962 374 VEIAKELQGKPDLIIGNYSD-----G-NIVASLL-AHKLGVTQCTIAHA 415 (783)
Q Consensus 374 ~~l~~~l~~~pDIIh~h~~~-----~-~lva~ll-ar~lgvp~v~t~H~ 415 (783)
..+...+...||+++.|-.. + ++...+. +-..|+|+++.+..
T Consensus 84 ~~l~~al~~~~DLlivNkFGk~Ea~G~Glr~~i~~A~~~giPVLt~V~~ 132 (159)
T PF10649_consen 84 AALRRALAEGADLLIVNKFGKQEAEGRGLRDEIAAALAAGIPVLTAVPP 132 (159)
T ss_pred HHHHHHHhcCCCEEEEcccHHhhhcCCCHHHHHHHHHHCCCCEEEEECH
Confidence 45555666789999988753 2 3433333 33469999998875
No 248
>PF13407 Peripla_BP_4: Periplasmic binding protein domain; PDB: 3BRS_B 3GBP_A 3GA5_A 1GCG_A 1GCA_A 3H75_A 3D02_A 3L49_B 3EJW_B 3T95_A ....
Probab=23.46 E-value=4.2e+02 Score=27.04 Aligned_cols=38 Identities=16% Similarity=0.214 Sum_probs=27.5
Q ss_pred HHHccCc-EEEeCCCCCCCcHHHHHHHHcCCcEEEcCcc
Q 003962 636 YICDTKG-AFVQPALYEAFGLTVVEAMTCGLPTFATCKG 673 (783)
Q Consensus 636 ~ia~aad-vfV~PS~~E~fGltvlEAMa~GlPVVat~~G 673 (783)
++....| +++.|...+...-.+-++...|.|||..+.+
T Consensus 51 ~i~~~~d~Iiv~~~~~~~~~~~l~~~~~~gIpvv~~d~~ 89 (257)
T PF13407_consen 51 AISQGVDGIIVSPVDPDSLAPFLEKAKAAGIPVVTVDSD 89 (257)
T ss_dssp HHHTTESEEEEESSSTTTTHHHHHHHHHTTSEEEEESST
T ss_pred HHHhcCCEEEecCCCHHHHHHHHHHHhhcCceEEEEecc
Confidence 3333455 5556666666777788899999999998777
No 249
>KOG2452 consensus Formyltetrahydrofolate dehydrogenase [Nucleotide transport and metabolism]
Probab=23.26 E-value=86 Score=35.78 Aligned_cols=39 Identities=23% Similarity=0.563 Sum_probs=28.0
Q ss_pred ceEEEEcccccccccCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHHCCCceeeceeEEeCCCCCCCCCc
Q 003962 255 FNVVILTPHGYFAQDDVLGYPDTGGQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRLLPDAVGTT 324 (783)
Q Consensus 255 ~rI~iis~h~~~~~~~~lg~p~tGG~~vyv~d~araL~~eLa~~L~~~GheV~~~i~VvT~~~~~~~g~~ 324 (783)
|||++|....+ |+++|-. |.+.||+|. .|+| +|+.+|..
T Consensus 1 mkiaiigqs~f-------------g~~vy~~-------------lrk~gheiv---~vft--ipdk~g~~ 39 (881)
T KOG2452|consen 1 MKIAVIGQSLF-------------GQEVYCH-------------LRKEGHEVV---GVFT--VPDKDGKA 39 (881)
T ss_pred CeeEEechhhh-------------hHHHHHH-------------HHhcCceEE---EEEE--ecCCCCCc
Confidence 78999976655 7777766 899999986 2444 56666653
No 250
>PRK11519 tyrosine kinase; Provisional
Probab=23.23 E-value=1.3e+03 Score=28.34 Aligned_cols=45 Identities=16% Similarity=0.100 Sum_probs=28.9
Q ss_pred HHHHHHHHHcCCCceEEEEcCCCch--HHHHHHHHhcCCcEEEEecC
Q 003962 371 DVAVEIAKELQGKPDLIIGNYSDGN--IVASLLAHKLGVTQCTIAHA 415 (783)
Q Consensus 371 ~~~~~l~~~l~~~pDIIh~h~~~~~--lva~llar~lgvp~v~t~H~ 415 (783)
..+..++..++.++|+|+...++.. .-+..+++..+..+.+.-++
T Consensus 623 ~~~~~ll~~l~~~yD~ViiDtpP~~~v~Da~~l~~~~d~~l~Vvr~~ 669 (719)
T PRK11519 623 ERFAELVNWASKNYDLVLIDTPPILAVTDAAIVGRHVGTTLMVARYA 669 (719)
T ss_pred HHHHHHHHHHHhcCCEEEEeCCCcccchHHHHHHHHCCeEEEEEeCC
Confidence 3445555555668999998877652 24556677777666555554
No 251
>PF03358 FMN_red: NADPH-dependent FMN reductase; InterPro: IPR005025 NADPH-dependent FMN reductase (1.5.1.29 from EC) reduces FMN and also reduces riboflavin and FAD, although more slowly. Members of this entry catalyse the reaction NAD(P)H + FMN = NAD(P)(+) + FMNH(2).; PDB: 3SVL_B 3GFS_F 3GFQ_A 1NNI_1 2GSW_B 3GFR_D 1T0I_B 3D7N_A 2R97_A 3B6K_A ....
Probab=23.20 E-value=1.2e+02 Score=28.83 Aligned_cols=35 Identities=14% Similarity=0.460 Sum_probs=22.0
Q ss_pred ceEEEEcccccccccCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHHCCCcee
Q 003962 255 FNVVILTPHGYFAQDDVLGYPDTGGQVVYILDQVRALEDEMLLRIKQQGLDIT 307 (783)
Q Consensus 255 ~rI~iis~h~~~~~~~~lg~p~tGG~~vyv~d~araL~~eLa~~L~~~GheV~ 307 (783)
|||++|+ |. |...|... .|++.+++.+.+.|++++
T Consensus 1 Mkilii~--gS---------~r~~~~t~-------~l~~~~~~~l~~~g~e~~ 35 (152)
T PF03358_consen 1 MKILIIN--GS---------PRKNSNTR-------KLAEAVAEQLEEAGAEVE 35 (152)
T ss_dssp -EEEEEE--SS---------SSTTSHHH-------HHHHHHHHHHHHTTEEEE
T ss_pred CEEEEEE--Cc---------CCCCCHHH-------HHHHHHHHHHHHcCCEEE
Confidence 8999995 33 33344433 333466777888899998
No 252
>PRK13288 pyrophosphatase PpaX; Provisional
Probab=22.98 E-value=6.3e+02 Score=25.35 Aligned_cols=120 Identities=11% Similarity=0.031 Sum_probs=66.4
Q ss_pred CCCCHHHHHHHHHHhHccCCCeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHHcCCCCcEEEc-c--CCCCcCChHHHHH
Q 003962 559 RVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLNGQFRWI-S--SQMNRVRNGELYR 635 (783)
Q Consensus 559 ~~Kgl~~LieA~~~l~~~~~~~~LvIVG~g~~~~~~~~ee~~~~~~l~~li~~~~L~~~V~fl-G--~~~~~~~~~el~~ 635 (783)
...|+..+++.+.+ .++++.|+.++.. ..+....+.+++.+.+..+ | ......+..+.+.
T Consensus 83 ~~~g~~~~l~~L~~-----~g~~~~i~S~~~~------------~~~~~~l~~~gl~~~f~~i~~~~~~~~~Kp~p~~~~ 145 (214)
T PRK13288 83 EYETVYETLKTLKK-----QGYKLGIVTTKMR------------DTVEMGLKLTGLDEFFDVVITLDDVEHAKPDPEPVL 145 (214)
T ss_pred cCcCHHHHHHHHHH-----CCCeEEEEeCCCH------------HHHHHHHHHcCChhceeEEEecCcCCCCCCCcHHHH
Confidence 45666666666543 2577888877753 3455666777776543222 2 1112345566666
Q ss_pred HHHccCcEEEeCCC---CCCCcHHHHHHHHcCCcEEEcCccc--cccccccCceEEEECCCCHHHHHHHH
Q 003962 636 YICDTKGAFVQPAL---YEAFGLTVVEAMTCGLPTFATCKGG--PAEIIVNGKSGYHIDPYHGEQAAEIL 700 (783)
Q Consensus 636 ~ia~aadvfV~PS~---~E~fGltvlEAMa~GlPVVat~~GG--~~EiI~dg~~G~li~p~d~e~lAeaI 700 (783)
.+.+..+ +.|+. .+-...=+.-|.++|+++|+-..|. ..+.-+.+ .-+.++ +..++.+.+
T Consensus 146 ~~~~~~~--~~~~~~~~iGDs~~Di~aa~~aG~~~i~v~~g~~~~~~l~~~~-~~~~i~--~~~~l~~~i 210 (214)
T PRK13288 146 KALELLG--AKPEEALMVGDNHHDILAGKNAGTKTAGVAWTIKGREYLEQYK-PDFMLD--KMSDLLAIV 210 (214)
T ss_pred HHHHHcC--CCHHHEEEECCCHHHHHHHHHCCCeEEEEcCCCCCHHHHhhcC-cCEEEC--CHHHHHHHH
Confidence 6554222 23321 2333445777889999999765542 23332222 345565 777776655
No 253
>COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism]
Probab=22.82 E-value=1.2e+03 Score=26.82 Aligned_cols=111 Identities=9% Similarity=0.057 Sum_probs=66.5
Q ss_pred eEEEEEeCCCCCCCccHHHHHHHHHHHHHHHHcCCCCcEEEccCCCCcCChHHHHHHHHccCcEEEeCCC--CCCCcHH-
Q 003962 580 VNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPAL--YEAFGLT- 656 (783)
Q Consensus 580 ~~LvIVG~g~~~~~~~~ee~~~~~~l~~li~~~~L~~~V~flG~~~~~~~~~el~~~ia~aadvfV~PS~--~E~fGlt- 656 (783)
.++.|++.. .++-.+++++++ .. .++.+++..++.+ +|+++..+- .--.+..
T Consensus 203 ~~i~IaNRT-------------~erA~~La~~~~--~~---------~~~l~el~~~l~~-~DvVissTsa~~~ii~~~~ 257 (414)
T COG0373 203 KKITIANRT-------------LERAEELAKKLG--AE---------AVALEELLEALAE-ADVVISSTSAPHPIITREM 257 (414)
T ss_pred CEEEEEcCC-------------HHHHHHHHHHhC--Ce---------eecHHHHHHhhhh-CCEEEEecCCCccccCHHH
Confidence 467777765 356678888887 11 4456799999997 998887533 1223333
Q ss_pred HHHHHHcCCcEEEcCccccccccccC---ceEEEECCCCHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHH
Q 003962 657 VVEAMTCGLPTFATCKGGPAEIIVNG---KSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRI 725 (783)
Q Consensus 657 vlEAMa~GlPVVat~~GG~~EiI~dg---~~G~li~p~d~e~lAeaI~~~l~~l~~dp~~~~~ms~~a~~~v 725 (783)
+-+|+.--...+.-|.+-|+++=.+- .+-+++ |.|++-.... .|-..|++..+.+...+
T Consensus 258 ve~a~~~r~~~livDiavPRdie~~v~~l~~v~l~---~iDDL~~iv~-------~n~~~R~~~~~~ae~iI 319 (414)
T COG0373 258 VERALKIRKRLLIVDIAVPRDVEPEVGELPNVFLY---TIDDLEEIVE-------ENLEARKEEAAKAEAII 319 (414)
T ss_pred HHHHHhcccCeEEEEecCCCCCCccccCcCCeEEE---ehhhHHHHHH-------HhHHHHHHHHHHHHHHH
Confidence 33444444446888999888864331 122455 5666555442 34455666666665555
No 254
>TIGR01286 nifK nitrogenase molybdenum-iron protein beta chain. This model represents the majority of known sequences of the nitrogenase molybdenum-iron protein beta subunit. A distinct clade in a phylogenetic tree contains molybdenum-iron, vanadium-iron, and iron-iron forms of nitrogenase beta subunit and is excluded from this model. Nitrogenase, also called dinitrogenase, is responsible for nitrogen fixation. Note: the trusted cutoff score has recently been lowered to include an additional family in which the beta subunit is shorter by about 50 amino acids at the N-terminus. In species with the shorter form of the beta subunit, the alpha subunit has a novel insert of similar length.
Probab=22.63 E-value=1.2e+03 Score=27.65 Aligned_cols=99 Identities=7% Similarity=0.003 Sum_probs=53.1
Q ss_pred cCCCCHHHHHHHHHHhH-c-------cCCCeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHHcCCCCcE-----------
Q 003962 558 DRVKNLTGLVEWYGKNA-K-------LRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLNGQF----------- 618 (783)
Q Consensus 558 ~~~Kgl~~LieA~~~l~-~-------~~~~~~LvIVG~g~~~~~~~~ee~~~~~~l~~li~~~~L~~~V----------- 618 (783)
+...|.+..++++-+.. + ..++-.+-|+|+.... ....++++++.+..|++-++
T Consensus 191 s~~~Gyd~a~~ail~~l~~~~~~~~~~~~~~~VNii~g~~~~-------~gd~~eikrlL~~~Gi~~~~l~d~s~~~d~p 263 (515)
T TIGR01286 191 SHITGYDNMFKGILEYFTKGSMDDKVVGSNGKINIIPGFETY-------IGNFREIKRILSLMGVGYTLLSDPEEVLDTP 263 (515)
T ss_pred cHHHHHHHHHHHHHHHHhhcccccccCCCCCeEEEECCCCCC-------chhHHHHHHHHHHcCCCeEEccCccccccCC
Confidence 34567666666655321 1 1122334456643210 13467888999999985544
Q ss_pred ------EEccCCCCcCChHHHHHHHHccCcEEEeCCCCCCCcHHHHHHHH--cCCcEEEcC
Q 003962 619 ------RWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMT--CGLPTFATC 671 (783)
Q Consensus 619 ------~flG~~~~~~~~~el~~~ia~aadvfV~PS~~E~fGltvlEAMa--~GlPVVat~ 671 (783)
.+.| ..+.+++.+.-...+.+.++|.. +....+.|. +|.|.+...
T Consensus 264 ~~g~~~~~~g----gttleei~~a~~A~~~ivl~~~~----~~~~a~~l~~~~g~p~~~~~ 316 (515)
T TIGR01286 264 ADGEFRMYAG----GTTLEEMKDAPNAEATVLLQPYT----LRKTKEYIEKTWKQETPKLN 316 (515)
T ss_pred CCCCccccCC----CCCHHHHHHhhhCcEEEEEchhh----hHHHHHHHHHHhCCCcccCC
Confidence 1222 35567777755533334444422 345566655 799876543
No 255
>PLN02778 3,5-epimerase/4-reductase
Probab=22.61 E-value=84 Score=33.99 Aligned_cols=31 Identities=16% Similarity=0.308 Sum_probs=24.4
Q ss_pred CCcceEEEEcccccccccCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHHCCCcee
Q 003962 252 PMVFNVVILTPHGYFAQDDVLGYPDTGGQVVYILDQVRALEDEMLLRIKQQGLDIT 307 (783)
Q Consensus 252 pm~~rI~iis~h~~~~~~~~lg~p~tGG~~vyv~d~araL~~eLa~~L~~~GheV~ 307 (783)
++.|||+|....|+.|. .|++.|.++||+|+
T Consensus 7 ~~~~kiLVtG~tGfiG~-------------------------~l~~~L~~~g~~V~ 37 (298)
T PLN02778 7 SATLKFLIYGKTGWIGG-------------------------LLGKLCQEQGIDFH 37 (298)
T ss_pred CCCCeEEEECCCCHHHH-------------------------HHHHHHHhCCCEEE
Confidence 46689999988887542 56778899999987
No 256
>COG1618 Predicted nucleotide kinase [Nucleotide transport and metabolism]
Probab=22.39 E-value=1.9e+02 Score=29.01 Aligned_cols=72 Identities=18% Similarity=0.220 Sum_probs=47.1
Q ss_pred HHHHHHHHccCcEEEeCCC--CC----CCcHHHHHHHHcCCcEEEcCc-----cccccccccCceEEE-ECCCCHHHHHH
Q 003962 631 GELYRYICDTKGAFVQPAL--YE----AFGLTVVEAMTCGLPTFATCK-----GGPAEIIVNGKSGYH-IDPYHGEQAAE 698 (783)
Q Consensus 631 ~el~~~ia~aadvfV~PS~--~E----~fGltvlEAMa~GlPVVat~~-----GG~~EiI~dg~~G~l-i~p~d~e~lAe 698 (783)
+.+-+.+.+ +|+.+.--. .| .|.-.+-|.|-|+.|+|||-+ +...+ +.....-++ ++|.|-+.+.+
T Consensus 92 ~al~rA~~~-aDvIIIDEIGpMElks~~f~~~ve~vl~~~kpliatlHrrsr~P~v~~-ik~~~~v~v~lt~~NR~~i~~ 169 (179)
T COG1618 92 PALRRALEE-ADVIIIDEIGPMELKSKKFREAVEEVLKSGKPLIATLHRRSRHPLVQR-IKKLGGVYVFLTPENRNRILN 169 (179)
T ss_pred HHHHHHhhc-CCEEEEecccchhhccHHHHHHHHHHhcCCCcEEEEEecccCChHHHH-hhhcCCEEEEEccchhhHHHH
Confidence 445666665 888887432 22 356678899999999999833 23333 333333344 89999988877
Q ss_pred HHHHHH
Q 003962 699 ILVDFF 704 (783)
Q Consensus 699 aI~~~l 704 (783)
.|...+
T Consensus 170 ~Il~~L 175 (179)
T COG1618 170 EILSVL 175 (179)
T ss_pred HHHHHh
Confidence 776654
No 257
>PRK13478 phosphonoacetaldehyde hydrolase; Provisional
Probab=22.20 E-value=8e+02 Score=25.72 Aligned_cols=99 Identities=11% Similarity=0.014 Sum_probs=51.4
Q ss_pred cCCCCHHHHHHHHHHhHccCCCeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHHcCCCC---cEEEcc-CCCCcCChHHH
Q 003962 558 DRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLNG---QFRWIS-SQMNRVRNGEL 633 (783)
Q Consensus 558 ~~~Kgl~~LieA~~~l~~~~~~~~LvIVG~g~~~~~~~~ee~~~~~~l~~li~~~~L~~---~V~flG-~~~~~~~~~el 633 (783)
....|+..+++.+.. .++++.|+-+.+. ..+....+.+++.+ ...+.+ ......+..++
T Consensus 101 ~~~pg~~elL~~L~~-----~g~~l~I~T~~~~------------~~~~~~l~~~~l~~~~~d~i~~~~~~~~~KP~p~~ 163 (267)
T PRK13478 101 TPIPGVLEVIAALRA-----RGIKIGSTTGYTR------------EMMDVVVPLAAAQGYRPDHVVTTDDVPAGRPYPWM 163 (267)
T ss_pred CCCCCHHHHHHHHHH-----CCCEEEEEcCCcH------------HHHHHHHHHHhhcCCCceEEEcCCcCCCCCCChHH
Confidence 345676666666543 2577888776642 22333334333322 122222 11223456666
Q ss_pred HHHHHccCcEEEe-CCC---CCCCcHHHHHHHHcCCcEEEcCcccc
Q 003962 634 YRYICDTKGAFVQ-PAL---YEAFGLTVVEAMTCGLPTFATCKGGP 675 (783)
Q Consensus 634 ~~~ia~aadvfV~-PS~---~E~fGltvlEAMa~GlPVVat~~GG~ 675 (783)
+....+..+ +. |+- .+-...=+.=|-++|.++|+...|+.
T Consensus 164 ~~~a~~~l~--~~~~~e~l~IGDs~~Di~aA~~aG~~~i~v~~g~~ 207 (267)
T PRK13478 164 ALKNAIELG--VYDVAACVKVDDTVPGIEEGLNAGMWTVGVILSGN 207 (267)
T ss_pred HHHHHHHcC--CCCCcceEEEcCcHHHHHHHHHCCCEEEEEccCcc
Confidence 665543232 32 221 23344557778899999999866654
No 258
>PRK13398 3-deoxy-7-phosphoheptulonate synthase; Provisional
Probab=22.09 E-value=9.9e+02 Score=25.60 Aligned_cols=110 Identities=14% Similarity=0.074 Sum_probs=68.6
Q ss_pred EEEEecccCCCCHHHHHHHHHHhHccCCCeEEEEEeCCCCCCC---ccHHHHHHHHHHHHHHHHcCCCCcEEEccCCCCc
Q 003962 551 LFTMARLDRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKES---KDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNR 627 (783)
Q Consensus 551 Il~vGRL~~~Kgl~~LieA~~~l~~~~~~~~LvIVG~g~~~~~---~~~ee~~~~~~l~~li~~~~L~~~V~flG~~~~~ 627 (783)
++.++-..-..+.+.+++.+.++++.. .+++..|...++.+ ...-..+..+.+++..+++|+.=-.....
T Consensus 28 ~~~iaGPCsie~~~~~~~~A~~lk~~g--~~~~r~~~~kpRTs~~s~~G~g~~gl~~l~~~~~~~Gl~~~te~~d----- 100 (266)
T PRK13398 28 KIIIAGPCAVESEEQMVKVAEKLKELG--VHMLRGGAFKPRTSPYSFQGLGEEGLKILKEVGDKYNLPVVTEVMD----- 100 (266)
T ss_pred EEEEEeCCcCCCHHHHHHHHHHHHHcC--CCEEEEeeecCCCCCCccCCcHHHHHHHHHHHHHHcCCCEEEeeCC-----
Confidence 455555666778999999999999853 56777774332211 12112456677888888888743223332
Q ss_pred CChHHHHHHHHccCcEEEeCCC-CCCCcHHHHHH-HHcCCcEEEcCc
Q 003962 628 VRNGELYRYICDTKGAFVQPAL-YEAFGLTVVEA-MTCGLPTFATCK 672 (783)
Q Consensus 628 ~~~~el~~~ia~aadvfV~PS~-~E~fGltvlEA-Ma~GlPVVat~~ 672 (783)
.+-..++.+..|++-.+|. .+.++ ++++ -..|+||+.++-
T Consensus 101 ---~~~~~~l~~~vd~~kIga~~~~n~~--LL~~~a~~gkPV~lk~G 142 (266)
T PRK13398 101 ---TRDVEEVADYADMLQIGSRNMQNFE--LLKEVGKTKKPILLKRG 142 (266)
T ss_pred ---hhhHHHHHHhCCEEEECcccccCHH--HHHHHhcCCCcEEEeCC
Confidence 2334444456889999987 34433 4444 456999999743
No 259
>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit. This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.
Probab=21.55 E-value=4e+02 Score=28.83 Aligned_cols=55 Identities=27% Similarity=0.266 Sum_probs=30.5
Q ss_pred HHHHHHHHCCCceeeceeEEeCC-CCC-CCCCcccceeeeecCccCeEEEEeccCCCcccc
Q 003962 294 EMLLRIKQQGLDITPQILIITRL-LPD-AVGTTCGQRLEKVYGTKYSDILRVPFRTEKGVV 352 (783)
Q Consensus 294 eLa~~L~~~GheV~~~i~VvT~~-~~~-~~g~~~~~~~e~i~~~~~v~Ilrvp~~~~~~~~ 352 (783)
+|++.|+++|++|. ++... ..+ ..|.......+..-....+-|+++|+....+.+
T Consensus 15 ~~~~~l~~~g~~v~----~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~~~~~~~~i 71 (287)
T TIGR02853 15 ELIRKLEELDAKIS----LIGFDQLEDGFTGAVKCELLELDLTTLDVVILPVPGTSHDGKV 71 (287)
T ss_pred HHHHHHHHCCCEEE----EEeccccccccccceeecchhhhhccCCEEEECCccccCCceE
Confidence 68899999999998 65432 101 112111112222122235788888887766543
No 260
>PRK07742 phosphate butyryltransferase; Validated
Probab=21.37 E-value=5.6e+02 Score=27.90 Aligned_cols=81 Identities=11% Similarity=0.160 Sum_probs=45.7
Q ss_pred cEEEEEecccCCCCHHHHHHHHHHhHccCCCeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHHcCC--CCcEEEccCCCC
Q 003962 549 PILFTMARLDRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKL--NGQFRWISSQMN 626 (783)
Q Consensus 549 ~iIl~vGRL~~~Kgl~~LieA~~~l~~~~~~~~LvIVG~g~~~~~~~~ee~~~~~~l~~li~~~~L--~~~V~flG~~~~ 626 (783)
..|.+..--+ ...++++.+..++.. ++++++|+. +.+++.++++++ .+++.++-....
T Consensus 16 ~ri~~~~~~d-----~~vl~Aa~~a~~e~~-~~~iLvG~~--------------~~I~~~~~~~~l~~~~~~~Ii~~~~~ 75 (299)
T PRK07742 16 KTVAVAVAED-----EEVIEAVAKAIELQL-ARFRLYGNQ--------------EKIMGMLQEHGLQTSEHIEIIHAQSS 75 (299)
T ss_pred CeEEEeCCCC-----HHHHHHHHHHHHcCC-ceEEEECCH--------------HHHHHHHHHCCCCCCCCcEEECCCCH
Confidence 3455555322 356666666666554 899999976 456777778776 456777753221
Q ss_pred cCChHHHHHHHH-ccCcEEEeCCC
Q 003962 627 RVRNGELYRYIC-DTKGAFVQPAL 649 (783)
Q Consensus 627 ~~~~~el~~~ia-~aadvfV~PS~ 649 (783)
......-..+++ ..+|++|....
T Consensus 76 ~~s~~~a~~lV~~G~aD~lvsG~~ 99 (299)
T PRK07742 76 AEAAELAVKAVRNGEADVLMKGNV 99 (299)
T ss_pred HHHHHHHHHHHHCCCCCEEEECCc
Confidence 001111133443 23888886544
No 261
>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]
Probab=20.97 E-value=5.7e+02 Score=26.54 Aligned_cols=34 Identities=29% Similarity=0.379 Sum_probs=20.8
Q ss_pred CCceEEEEcCCC--chHHHHHHHHh-cCCcEEE-EecC
Q 003962 382 GKPDLIIGNYSD--GNIVASLLAHK-LGVTQCT-IAHA 415 (783)
Q Consensus 382 ~~pDIIh~h~~~--~~lva~llar~-lgvp~v~-t~H~ 415 (783)
.+.|++.+-... .|.++..++.+ +|+|.++ .+++
T Consensus 65 ~~aD~vva~t~~d~~N~i~~~la~~~~gv~~viar~~~ 102 (225)
T COG0569 65 DDADAVVAATGNDEVNSVLALLALKEFGVPRVIARARN 102 (225)
T ss_pred CcCCEEEEeeCCCHHHHHHHHHHHHhcCCCcEEEEecC
Confidence 578888854332 36666666655 8988653 4443
No 262
>PF03668 ATP_bind_2: P-loop ATPase protein family; InterPro: IPR005337 This entry represents UPF0042 nucleotide-binding proteins. This is a family of putative P-loop ATPases [], as they contain an ATP-binding site and display ATPase and GTPase activities.; GO: 0005524 ATP binding
Probab=20.77 E-value=3e+02 Score=29.95 Aligned_cols=122 Identities=19% Similarity=0.325 Sum_probs=68.5
Q ss_pred hHHHHHhhcccCCeeeecccCCCChHHHHHHHHHHHHHhhcCCCCCCchHHHHHhhhcCcccCCCCcHHHHHHH------
Q 003962 155 PLLEFLRVHCHKGKNMMLNDRIQNLNSLQHVLRKAEEYLTTVVPETPFSELALRFQEIGLERGWGDTAERALEM------ 228 (783)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~------ 228 (783)
.+|.-||..- .+.|+-.=-|+.+|+..|..... .. .+ +.+.-.++..||..|-...|.-|.+.
T Consensus 123 ~~L~~lr~~A----d~vIDTs~l~~~~Lr~~i~~~~~--~~----~~-~~l~v~i~SFGfK~GiP~dAD~VfDvRfLpNP 191 (284)
T PF03668_consen 123 ELLEPLRERA----DLVIDTSNLSVHQLRERIRERFG--GD----KE-SRLTVTIQSFGFKYGIPPDADLVFDVRFLPNP 191 (284)
T ss_pred HHHHHHHHhC----CEEEECCCCCHHHHHHHHHHHhc--cC----CC-CceEEEEEEeccccCCCCCCCEEEEcCcCCCC
Confidence 4455555543 46677777788888888876532 11 11 34666778888877776665433211
Q ss_pred -----H--------HHHHHhhcCCChh------------cHHHHhccCCCcceEEEEcccccccccCCCCCCCCCcchhh
Q 003962 229 -----I--------QLLLDLLEAPDPC------------TLETFLGRIPMVFNVVILTPHGYFAQDDVLGYPDTGGQVVY 283 (783)
Q Consensus 229 -----~--------~~~~~~~~~p~~~------------~~~~f~~~~pm~~rI~iis~h~~~~~~~~lg~p~tGG~~vy 283 (783)
| ..-.-++..|+.. .++.|...-..-+.|+|=| |||+-..
T Consensus 192 ~y~~~Lr~lTG~D~~V~~yv~~~~~~~~f~~~~~~~l~~~lp~y~~egk~~ltIaiGC---------------TGG~HRS 256 (284)
T PF03668_consen 192 YYVPELRPLTGLDKPVQDYVLSDPEAQEFLEKIEDLLDFLLPRYEKEGKSYLTIAIGC---------------TGGQHRS 256 (284)
T ss_pred CCChhhhhcCCCChHHHHHHHcChhHHHHHHHHHHHHHHHHHHHHhcCCceEEEEEEc---------------CCCcCcH
Confidence 1 0111112222211 2222322222223444433 7999888
Q ss_pred HHHHHHHHHHHHHHHHHHCCCcee
Q 003962 284 ILDQVRALEDEMLLRIKQQGLDIT 307 (783)
Q Consensus 284 v~d~araL~~eLa~~L~~~GheV~ 307 (783)
|. ++.+|++.|++.|+.|.
T Consensus 257 V~-----iae~La~~L~~~~~~v~ 275 (284)
T PF03668_consen 257 VA-----IAERLAERLREKGYTVV 275 (284)
T ss_pred HH-----HHHHHHHHHHhcCCcce
Confidence 87 56688899999999887
No 263
>PRK08057 cobalt-precorrin-6x reductase; Reviewed
Probab=20.49 E-value=7.1e+02 Score=26.39 Aligned_cols=23 Identities=13% Similarity=0.195 Sum_probs=17.6
Q ss_pred CCcHHHHHHHHcCCcEEEcCccc
Q 003962 652 AFGLTVVEAMTCGLPTFATCKGG 674 (783)
Q Consensus 652 ~fGltvlEAMa~GlPVVat~~GG 674 (783)
|+--++--|+.+|+|||.-+.+-
T Consensus 203 g~~eKi~AA~~lgi~vivI~RP~ 225 (248)
T PRK08057 203 GTEAKLEAARELGIPVVMIARPA 225 (248)
T ss_pred hhHHHHHHHHHcCCeEEEEeCCC
Confidence 45557888889999999876653
No 264
>PRK10360 DNA-binding transcriptional activator UhpA; Provisional
Probab=20.34 E-value=7.7e+02 Score=23.62 Aligned_cols=74 Identities=11% Similarity=0.140 Sum_probs=50.1
Q ss_pred HHHHHHHH-ccCcEEEeCCC-CCCCcHHHHHHHHcCCcEEEc-Ccccc---ccccccCceEEEECCCCHHHHHHHHHHHH
Q 003962 631 GELYRYIC-DTKGAFVQPAL-YEAFGLTVVEAMTCGLPTFAT-CKGGP---AEIIVNGKSGYHIDPYHGEQAAEILVDFF 704 (783)
Q Consensus 631 ~el~~~ia-~aadvfV~PS~-~E~fGltvlEAMa~GlPVVat-~~GG~---~EiI~dg~~G~li~p~d~e~lAeaI~~~l 704 (783)
.+....+. ...|+++.-.. .+.-|..+++.+....|+++. ..... .+.+..|..|++..|.+.+++.++|..++
T Consensus 37 ~~~l~~~~~~~~dlvi~d~~~~~~~g~~~~~~l~~~~~vi~~s~~~~~~~~~~~~~~ga~~~i~kp~~~~~l~~~i~~~~ 116 (196)
T PRK10360 37 REALAGLPGRGVQVCICDISMPDISGLELLSQLPKGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVA 116 (196)
T ss_pred HHHHHHHhcCCCCEEEEeCCCCCCCHHHHHHHHccCCCEEEEECCCCHHHHHHHHHcCCcEEEECCCCHHHHHHHHHHHH
Confidence 44444443 23577777543 345677888888778888874 33322 23456788999999999999999997765
No 265
>KOG0853 consensus Glycosyltransferase [Cell wall/membrane/envelope biogenesis]
Probab=20.29 E-value=2.8e+02 Score=32.55 Aligned_cols=101 Identities=10% Similarity=-0.058 Sum_probs=64.6
Q ss_pred HHhhhcCCEEEcCCHHHHhhccccccccccccccccccceeeeccCCCCCCcEEEecCCccCCCCCCCchHHHhhccCch
Q 003962 445 LIAMNHTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEEKRRLKSFHP 524 (783)
Q Consensus 445 ~~a~~~AD~IIt~S~~~~~~~~~~v~qy~~~~~f~~p~l~~v~~gi~~~~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~ 524 (783)
......+|.++++|+..+..++..+- .++ ..++.++.+++|.+.+.+.........
T Consensus 204 ~e~~~~~~~~~~ns~~~~~~f~~~~~------------------~L~--~~d~~~~y~ei~~s~~~~~~~~~~~~~---- 259 (495)
T KOG0853|consen 204 EETTGLAWKILVNSYFTKRQFKATFV------------------SLS--NSDITSTYPEIDGSWFTYGQYESHLEL---- 259 (495)
T ss_pred hhhhhccceEecchhhhhhhhhhhhh------------------hcC--CCCcceeeccccchhccccccccchhc----
Confidence 34566889999999877664444321 223 344888999999887765211110000
Q ss_pred hhHHhhcChhhhhhhhccccCCCCcEEEEEecccCCCCHHHHHHHHHHhHccCCC
Q 003962 525 EIEELLYSDVENKEHLCVLKDRNKPILFTMARLDRVKNLTGLVEWYGKNAKLREL 579 (783)
Q Consensus 525 ~~~~~l~~~~~~~~~~gll~~~~k~iIl~vGRL~~~Kgl~~LieA~~~l~~~~~~ 579 (783)
....+...|. ...+..+..+.|+.|.||++.+++++.++....++
T Consensus 260 --------~~~~r~~~~v--~~~d~~~~siN~~~pgkd~~l~l~a~~~~~~~i~~ 304 (495)
T KOG0853|consen 260 --------RLPVRLYRGV--SGIDRFFPSINRFEPGKDQDLALPAFTLLHDSIPE 304 (495)
T ss_pred --------ccccceeeee--cccceEeeeeeecCCCCCceeehhhHHhhhcccCC
Confidence 0111222344 44467888999999999999999999888765554
No 266
>PRK02122 glucosamine-6-phosphate deaminase-like protein; Validated
Probab=20.18 E-value=95 Score=37.78 Aligned_cols=42 Identities=36% Similarity=0.643 Sum_probs=27.1
Q ss_pred CCCcceEEEEcccccccccCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHHCCCceeeceeEEeC
Q 003962 251 IPMVFNVVILTPHGYFAQDDVLGYPDTGGQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITR 315 (783)
Q Consensus 251 ~pm~~rI~iis~h~~~~~~~~lg~p~tGG~~vyv~d~araL~~eLa~~L~~~GheV~~~i~VvT~ 315 (783)
-|..+||+++|||-- ..++| .||. ..+|.++||+|+ |+++|.
T Consensus 366 ~~~~~rvLv~spHPD---Devi~---~GGT---------------larl~~~G~~V~--vv~~Ts 407 (652)
T PRK02122 366 LPYPKRVIIFSPHPD---DDVIS---MGGT---------------FRRLVEQGHDVH--VAYQTS 407 (652)
T ss_pred ccCCceEEEEEeCCC---chHhh---hHHH---------------HHHHHHCCCcEE--EEEecC
Confidence 466799999999942 23343 2443 234789999999 334443
No 267
>PRK00346 surE 5'(3')-nucleotidase/polyphosphatase; Provisional
Probab=20.01 E-value=1.1e+03 Score=25.18 Aligned_cols=35 Identities=29% Similarity=0.545 Sum_probs=22.6
Q ss_pred CCCceEEEE--cCC---------CchHHHHHHHHhcCCcEEEEecC
Q 003962 381 QGKPDLIIG--NYS---------DGNIVASLLAHKLGVTQCTIAHA 415 (783)
Q Consensus 381 ~~~pDIIh~--h~~---------~~~lva~llar~lgvp~v~t~H~ 415 (783)
..+||+|++ |.- -|...|++-+...|+|-+..-..
T Consensus 80 ~~~pDlVvSGIN~G~N~g~~v~ySGTVgAA~ea~~~GiPaiA~S~~ 125 (250)
T PRK00346 80 DPKPDLVVSGINHGANLGDDVLYSGTVAAAMEGALLGIPAIAVSLA 125 (250)
T ss_pred cCCCCEEEeCCccCCCCCCCeeccHHHHHHHHHHhcCCCeEEEecc
Confidence 458999995 111 12355666677889998876653
Done!