Query 003963
Match_columns 783
No_of_seqs 537 out of 3752
Neff 7.7
Searched_HMMs 46136
Date Thu Mar 28 15:06:31 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/003963.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/003963hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0581 Mitogen-activated prot 100.0 1.4E-49 3E-54 415.9 26.9 260 500-772 74-342 (364)
2 KOG0575 Polo-like serine/threo 100.0 1.3E-48 2.9E-53 429.6 24.6 254 505-769 18-273 (592)
3 KOG0598 Ribosomal protein S6 k 100.0 9.4E-48 2E-52 402.2 22.4 259 503-771 23-287 (357)
4 KOG0192 Tyrosine kinase specif 100.0 6.3E-47 1.4E-51 413.7 28.5 275 498-773 34-313 (362)
5 KOG0615 Serine/threonine prote 100.0 2.7E-48 5.9E-53 408.1 15.7 262 503-774 170-446 (475)
6 KOG0595 Serine/threonine-prote 100.0 1.5E-46 3.2E-51 396.0 24.3 259 504-772 9-275 (429)
7 KOG0591 NIMA (never in mitosis 100.0 3.4E-47 7.3E-52 382.0 12.1 258 502-760 16-282 (375)
8 KOG0592 3-phosphoinositide-dep 100.0 2.2E-45 4.7E-50 397.7 24.2 257 503-770 71-343 (604)
9 KOG0616 cAMP-dependent protein 100.0 8.3E-46 1.8E-50 375.0 18.7 254 502-769 41-301 (355)
10 KOG0593 Predicted protein kina 100.0 6.7E-46 1.4E-50 376.1 16.2 256 505-769 2-288 (396)
11 KOG0583 Serine/threonine prote 100.0 4.9E-44 1.1E-48 394.1 26.4 258 502-770 14-280 (370)
12 KOG0198 MEKK and related serin 100.0 1.8E-44 4E-49 383.5 20.7 258 505-772 17-283 (313)
13 KOG0588 Serine/threonine prote 100.0 1.3E-44 2.7E-49 398.7 19.8 258 505-774 12-272 (786)
14 KOG0597 Serine-threonine prote 100.0 7.4E-45 1.6E-49 392.8 17.3 254 505-770 2-256 (808)
15 KOG0694 Serine/threonine prote 100.0 8E-44 1.7E-48 395.8 24.4 259 501-771 364-630 (694)
16 KOG0197 Tyrosine kinases [Sign 100.0 8.4E-44 1.8E-48 388.4 21.0 262 498-765 199-463 (468)
17 KOG0605 NDR and related serine 100.0 1.1E-43 2.4E-48 385.1 20.8 259 503-771 139-451 (550)
18 KOG0610 Putative serine/threon 100.0 1.1E-42 2.3E-47 366.7 25.5 265 500-772 72-399 (459)
19 KOG0582 Ste20-like serine/thre 100.0 1.2E-42 2.5E-47 368.8 25.1 265 499-774 20-302 (516)
20 KOG0661 MAPK related serine/th 100.0 7.8E-44 1.7E-48 380.4 14.1 261 503-774 8-300 (538)
21 KOG0578 p21-activated serine/t 100.0 6E-43 1.3E-47 382.2 19.2 254 504-769 272-527 (550)
22 KOG0659 Cdk activating kinase 100.0 1.3E-42 2.9E-47 347.1 19.9 257 505-770 2-286 (318)
23 KOG0193 Serine/threonine prote 100.0 1.8E-42 3.9E-47 379.1 21.8 272 498-774 385-664 (678)
24 KOG0600 Cdc2-related protein k 100.0 7.7E-43 1.7E-47 375.3 17.9 261 503-772 115-407 (560)
25 cd05102 PTKc_VEGFR3 Catalytic 100.0 1.7E-41 3.7E-46 372.1 26.5 263 500-765 2-336 (338)
26 KOG0580 Serine/threonine prote 100.0 1E-42 2.2E-47 343.5 14.8 258 502-771 19-279 (281)
27 KOG0201 Serine/threonine prote 100.0 3.6E-43 7.7E-48 372.9 10.8 256 505-771 13-269 (467)
28 cd05612 STKc_PRKX_like Catalyt 100.0 1.8E-41 4E-46 364.3 23.2 252 505-770 1-259 (291)
29 cd05571 STKc_PKB Catalytic dom 100.0 2E-41 4.4E-46 369.6 21.5 249 511-770 1-256 (323)
30 PTZ00263 protein kinase A cata 100.0 2.9E-41 6.2E-46 369.5 22.5 254 503-770 16-276 (329)
31 KOG4721 Serine/threonine prote 100.0 1.7E-42 3.6E-47 374.0 11.9 251 499-763 118-368 (904)
32 KOG0589 Serine/threonine prote 100.0 1E-41 2.2E-46 371.1 17.2 253 504-759 3-258 (426)
33 PTZ00426 cAMP-dependent protei 100.0 5.2E-41 1.1E-45 369.2 22.7 257 501-771 26-290 (340)
34 KOG0611 Predicted serine/threo 100.0 2.2E-41 4.8E-46 353.0 16.8 251 502-759 50-303 (668)
35 cd05631 STKc_GRK4 Catalytic do 100.0 3.3E-40 7.2E-45 353.3 25.8 257 506-771 1-267 (285)
36 KOG0585 Ca2+/calmodulin-depend 100.0 6.3E-41 1.4E-45 357.4 19.3 250 502-757 94-370 (576)
37 cd05600 STKc_Sid2p_Dbf2p Catal 100.0 1.7E-40 3.7E-45 363.7 23.3 255 505-771 1-263 (333)
38 KOG4717 Serine/threonine prote 100.0 4.6E-41 9.9E-46 359.2 18.1 259 503-772 16-277 (864)
39 KOG0690 Serine/threonine prote 100.0 2E-41 4.2E-46 345.3 14.6 263 501-771 164-430 (516)
40 cd05573 STKc_ROCK_NDR_like Cat 100.0 9.6E-41 2.1E-45 367.6 20.8 257 505-771 1-291 (350)
41 cd07871 STKc_PCTAIRE3 Catalyti 100.0 2.9E-40 6.2E-45 354.3 23.6 255 504-768 4-288 (288)
42 cd05595 STKc_PKB_beta Catalyti 100.0 2.2E-40 4.9E-45 361.5 22.8 249 511-770 1-256 (323)
43 cd05585 STKc_YPK1_like Catalyt 100.0 2.3E-40 5E-45 359.5 22.3 247 513-770 1-252 (312)
44 PLN00034 mitogen-activated pro 100.0 1.6E-39 3.5E-44 359.0 29.3 256 502-771 71-334 (353)
45 cd05593 STKc_PKB_gamma Catalyt 100.0 2.7E-40 5.9E-45 361.7 22.6 249 511-770 1-256 (328)
46 cd05589 STKc_PKN Catalytic dom 100.0 3.6E-40 7.9E-45 359.8 23.6 252 507-770 1-262 (324)
47 cd07848 STKc_CDKL5 Catalytic d 100.0 5E-40 1.1E-44 351.3 24.2 255 505-768 1-287 (287)
48 cd07869 STKc_PFTAIRE1 Catalyti 100.0 4.8E-40 1E-44 355.0 24.1 260 505-774 5-297 (303)
49 cd05628 STKc_NDR1 Catalytic do 100.0 7.1E-40 1.5E-44 363.4 25.3 257 505-770 1-298 (363)
50 cd05064 PTKc_EphR_A10 Catalyti 100.0 2.2E-39 4.8E-44 343.1 27.7 257 503-763 3-265 (266)
51 KOG0033 Ca2+/calmodulin-depend 100.0 7E-42 1.5E-46 337.4 7.9 250 504-757 10-265 (355)
52 cd05587 STKc_cPKC Catalytic do 100.0 6.8E-40 1.5E-44 357.7 24.4 254 506-770 1-262 (324)
53 PHA02988 hypothetical protein; 100.0 1.3E-39 2.7E-44 348.9 25.9 248 511-765 26-281 (283)
54 cd05584 STKc_p70S6K Catalytic 100.0 4.4E-40 9.6E-45 359.1 22.4 249 511-770 2-261 (323)
55 cd05599 STKc_NDR_like Catalyti 100.0 3.9E-40 8.5E-45 365.2 22.3 257 505-771 1-302 (364)
56 KOG0579 Ste20-like serine/thre 100.0 2.6E-41 5.7E-46 367.4 12.1 259 505-773 32-297 (1187)
57 cd05594 STKc_PKB_alpha Catalyt 100.0 2.7E-40 5.9E-45 361.0 19.9 249 511-770 1-257 (325)
58 KOG0663 Protein kinase PITSLRE 100.0 1.6E-40 3.4E-45 341.2 16.8 260 504-772 75-368 (419)
59 cd05626 STKc_LATS2 Catalytic d 100.0 1.1E-39 2.3E-44 364.3 24.7 256 506-770 2-310 (381)
60 cd05590 STKc_nPKC_eta Catalyti 100.0 6E-40 1.3E-44 357.6 22.0 256 511-771 1-259 (320)
61 cd06649 PKc_MEK2 Catalytic dom 100.0 4.7E-39 1E-43 352.2 28.8 258 503-771 3-307 (331)
62 KOG1989 ARK protein kinase fam 100.0 1.5E-39 3.2E-44 372.6 25.3 261 498-766 30-314 (738)
63 cd05629 STKc_NDR_like_fungal C 100.0 7.4E-40 1.6E-44 365.0 22.3 256 505-770 1-310 (377)
64 cd05582 STKc_RSK_N N-terminal 100.0 2.7E-40 5.9E-45 359.7 18.2 253 511-770 2-259 (318)
65 cd07859 STKc_TDY_MAPK_plant Ca 100.0 2.9E-39 6.4E-44 353.6 26.3 260 506-775 1-300 (338)
66 cd05616 STKc_cPKC_beta Catalyt 100.0 1.4E-39 3.1E-44 355.0 23.7 254 506-770 1-262 (323)
67 cd05106 PTKc_CSF-1R Catalytic 100.0 2.3E-39 4.9E-44 360.8 25.7 262 500-764 33-373 (374)
68 KOG0194 Protein tyrosine kinas 100.0 6.2E-40 1.3E-44 363.5 20.6 268 497-767 149-424 (474)
69 cd05596 STKc_ROCK Catalytic do 100.0 1.2E-39 2.6E-44 362.6 22.9 260 501-770 39-309 (370)
70 cd05096 PTKc_DDR1 Catalytic do 100.0 5.8E-39 1.3E-43 346.6 27.6 256 503-761 3-303 (304)
71 cd05601 STKc_CRIK Catalytic do 100.0 5.6E-40 1.2E-44 359.0 19.8 257 505-770 1-268 (330)
72 KOG1026 Nerve growth factor re 100.0 4.7E-40 1E-44 374.9 19.5 265 497-765 478-764 (774)
73 cd05591 STKc_nPKC_epsilon Cata 100.0 1.2E-39 2.7E-44 355.2 21.9 249 511-770 1-259 (321)
74 PTZ00036 glycogen synthase kin 100.0 7.7E-39 1.7E-43 363.8 29.1 255 503-773 64-359 (440)
75 cd07862 STKc_CDK6 Catalytic do 100.0 2E-39 4.4E-44 347.2 23.0 254 505-768 1-290 (290)
76 cd05598 STKc_LATS Catalytic do 100.0 8.5E-40 1.8E-44 364.3 20.7 257 505-771 1-307 (376)
77 cd05104 PTKc_Kit Catalytic dom 100.0 4E-39 8.7E-44 359.0 25.5 260 500-762 30-373 (375)
78 KOG0574 STE20-like serine/thre 100.0 8.3E-42 1.8E-46 344.7 3.5 255 505-771 33-289 (502)
79 cd05625 STKc_LATS1 Catalytic d 100.0 1.7E-39 3.7E-44 362.7 22.5 256 506-771 2-311 (382)
80 cd05072 PTKc_Lyn Catalytic dom 100.0 8.2E-39 1.8E-43 336.9 26.4 258 500-763 1-261 (261)
81 cd05621 STKc_ROCK2 Catalytic d 100.0 2.2E-39 4.7E-44 360.5 23.0 260 502-771 40-310 (370)
82 cd05592 STKc_nPKC_theta_delta 100.0 2.2E-39 4.8E-44 352.5 22.5 249 511-770 1-253 (316)
83 KOG0032 Ca2+/calmodulin-depend 100.0 4E-39 8.7E-44 355.1 24.7 262 502-774 32-302 (382)
84 KOG0658 Glycogen synthase kina 100.0 3.6E-40 7.9E-45 344.4 15.5 254 505-774 24-315 (364)
85 cd05614 STKc_MSK2_N N-terminal 100.0 2.4E-39 5.3E-44 354.3 22.9 255 506-771 1-273 (332)
86 cd05575 STKc_SGK Catalytic dom 100.0 1.4E-39 3.1E-44 355.0 20.5 253 511-770 1-256 (323)
87 cd05048 PTKc_Ror Catalytic Dom 100.0 7.9E-39 1.7E-43 341.1 25.8 256 503-762 3-282 (283)
88 cd05570 STKc_PKC Catalytic dom 100.0 2.5E-39 5.5E-44 352.3 22.2 249 511-770 1-257 (318)
89 cd05620 STKc_nPKC_delta Cataly 100.0 2.3E-39 5E-44 352.4 21.9 250 511-771 1-254 (316)
90 cd06650 PKc_MEK1 Catalytic dom 100.0 1.5E-38 3.3E-43 348.6 28.1 260 502-773 2-307 (333)
91 KOG0596 Dual specificity; seri 100.0 2.7E-39 5.9E-44 350.1 21.7 259 502-770 358-632 (677)
92 cd05588 STKc_aPKC Catalytic do 100.0 3E-39 6.6E-44 353.5 22.2 250 511-770 1-267 (329)
93 cd05627 STKc_NDR2 Catalytic do 100.0 2.5E-39 5.5E-44 358.5 21.5 257 505-771 1-299 (360)
94 cd05114 PTKc_Tec_Rlk Catalytic 100.0 2.1E-38 4.5E-43 333.1 27.3 250 505-760 4-255 (256)
95 cd05619 STKc_nPKC_theta Cataly 100.0 4.3E-39 9.3E-44 350.3 22.8 250 511-771 1-254 (316)
96 KOG4279 Serine/threonine prote 100.0 3.2E-40 7E-45 362.3 13.8 250 512-771 582-838 (1226)
97 cd05148 PTKc_Srm_Brk Catalytic 100.0 6.7E-39 1.4E-43 337.3 22.9 258 501-763 2-261 (261)
98 PTZ00283 serine/threonine prot 100.0 2.8E-38 6.1E-43 364.0 30.0 255 502-759 29-297 (496)
99 cd07872 STKc_PCTAIRE2 Catalyti 100.0 1.3E-38 2.9E-43 344.7 25.6 259 504-772 5-293 (309)
100 cd05608 STKc_GRK1 Catalytic do 100.0 1.2E-38 2.6E-43 340.3 24.7 251 513-771 1-263 (280)
101 cd05615 STKc_cPKC_alpha Cataly 100.0 8.2E-39 1.8E-43 349.1 23.9 259 506-771 1-263 (323)
102 cd05602 STKc_SGK1 Catalytic do 100.0 2.8E-39 6E-44 353.0 20.1 253 511-770 1-256 (325)
103 cd05068 PTKc_Frk_like Catalyti 100.0 3E-38 6.6E-43 332.8 27.2 258 500-763 1-261 (261)
104 KOG0594 Protein kinase PCTAIRE 100.0 3.6E-39 7.8E-44 337.7 19.3 261 504-773 10-310 (323)
105 cd05105 PTKc_PDGFR_alpha Catal 100.0 3E-38 6.5E-43 354.3 27.9 264 498-764 30-398 (400)
106 cd05622 STKc_ROCK1 Catalytic d 100.0 1E-38 2.2E-43 355.2 24.0 261 500-770 38-309 (371)
107 cd05033 PTKc_EphR Catalytic do 100.0 4.5E-38 9.8E-43 332.4 27.7 256 504-763 3-265 (266)
108 cd05618 STKc_aPKC_iota Catalyt 100.0 6.4E-39 1.4E-43 351.0 21.9 251 511-771 1-268 (329)
109 cd05061 PTKc_InsR Catalytic do 100.0 3.5E-38 7.6E-43 337.9 27.1 268 500-771 1-286 (288)
110 cd06625 STKc_MEKK3_like Cataly 100.0 4E-38 8.8E-43 331.5 27.1 255 505-768 2-263 (263)
111 PTZ00267 NIMA-related protein 100.0 3.9E-38 8.4E-43 361.9 29.1 249 505-758 67-322 (478)
112 cd08228 STKc_Nek6 Catalytic do 100.0 5.4E-38 1.2E-42 331.5 27.6 258 505-764 2-266 (267)
113 cd05108 PTKc_EGFR Catalytic do 100.0 4.9E-38 1.1E-42 341.6 27.8 259 504-767 6-272 (316)
114 cd05113 PTKc_Btk_Bmx Catalytic 100.0 5E-38 1.1E-42 330.8 26.8 251 504-760 3-255 (256)
115 cd05605 STKc_GRK4_like Catalyt 100.0 1.7E-38 3.8E-43 340.0 23.7 256 506-770 1-266 (285)
116 cd05067 PTKc_Lck_Blk Catalytic 100.0 4.4E-38 9.4E-43 331.4 26.2 256 500-762 1-259 (260)
117 cd05052 PTKc_Abl Catalytic dom 100.0 7.4E-38 1.6E-42 330.5 28.0 258 500-763 1-262 (263)
118 cd05597 STKc_DMPK_like Catalyt 100.0 1.8E-38 4E-43 347.6 24.0 258 505-770 1-271 (331)
119 cd05623 STKc_MRCK_alpha Cataly 100.0 1.4E-38 2.9E-43 348.7 22.9 259 505-771 1-272 (332)
120 cd05054 PTKc_VEGFR Catalytic d 100.0 2.4E-38 5.1E-43 347.7 24.8 263 500-765 2-335 (337)
121 cd05098 PTKc_FGFR1 Catalytic d 100.0 8.6E-38 1.9E-42 338.1 28.7 266 499-768 12-304 (307)
122 KOG0667 Dual-specificity tyros 100.0 8.4E-39 1.8E-43 356.1 20.9 251 504-769 185-506 (586)
123 cd07876 STKc_JNK2 Catalytic do 100.0 4.1E-38 8.8E-43 348.6 26.4 255 503-770 19-320 (359)
124 PTZ00284 protein kinase; Provi 100.0 1.4E-37 3.1E-42 356.4 31.8 255 503-773 127-446 (467)
125 cd05604 STKc_SGK3 Catalytic do 100.0 5.7E-39 1.2E-43 350.5 19.2 253 511-770 1-256 (325)
126 cd05059 PTKc_Tec_like Catalyti 100.0 5.3E-38 1.2E-42 330.2 25.9 251 504-760 3-255 (256)
127 cd05049 PTKc_Trk Catalytic dom 100.0 3.7E-38 8.1E-43 335.2 24.9 254 504-761 4-279 (280)
128 PF07714 Pkinase_Tyr: Protein 100.0 2.7E-38 5.9E-43 333.9 23.7 249 508-760 2-259 (259)
129 cd05062 PTKc_IGF-1R Catalytic 100.0 6.3E-38 1.4E-42 333.6 26.6 257 501-761 2-276 (277)
130 cd07853 STKc_NLK Catalytic dom 100.0 2.9E-38 6.4E-43 351.5 25.0 256 506-771 1-294 (372)
131 cd05089 PTKc_Tie1 Catalytic do 100.0 9.7E-38 2.1E-42 336.1 28.2 259 504-767 1-279 (297)
132 cd05617 STKc_aPKC_zeta Catalyt 100.0 9.6E-39 2.1E-43 349.2 20.5 257 511-771 1-266 (327)
133 cd05603 STKc_SGK2 Catalytic do 100.0 1.1E-38 2.3E-43 347.6 20.9 252 511-769 1-255 (321)
134 KOG0660 Mitogen-activated prot 100.0 6.3E-39 1.4E-43 334.6 18.0 257 504-770 21-315 (359)
135 PF00069 Pkinase: Protein kina 100.0 1.1E-38 2.4E-43 334.7 20.0 253 507-768 1-260 (260)
136 cd05071 PTKc_Src Catalytic dom 100.0 1.1E-37 2.4E-42 329.3 27.6 256 501-763 2-260 (262)
137 cd05032 PTKc_InsR_like Catalyt 100.0 8.1E-38 1.8E-42 332.0 26.7 258 500-761 1-276 (277)
138 cd08529 STKc_FA2-like Catalyti 100.0 1.2E-37 2.6E-42 326.3 27.5 250 506-758 1-252 (256)
139 cd05624 STKc_MRCK_beta Catalyt 100.0 1.8E-38 4E-43 347.6 22.2 258 505-770 1-271 (331)
140 cd08223 STKc_Nek4 Catalytic do 100.0 1.2E-37 2.7E-42 326.7 27.5 254 506-768 1-257 (257)
141 cd05090 PTKc_Ror1 Catalytic do 100.0 1.2E-37 2.6E-42 332.5 27.3 256 503-762 3-282 (283)
142 cd05607 STKc_GRK7 Catalytic do 100.0 4.5E-38 9.7E-43 335.4 23.9 252 513-771 1-260 (277)
143 KOG2345 Serine/threonine prote 100.0 6.6E-39 1.4E-43 317.8 16.1 262 501-764 17-301 (302)
144 cd07873 STKc_PCTAIRE1 Catalyti 100.0 5.3E-38 1.1E-42 338.6 24.6 259 504-772 5-293 (301)
145 KOG1187 Serine/threonine prote 100.0 2E-38 4.2E-43 348.8 21.5 259 503-764 73-353 (361)
146 PHA03212 serine/threonine kina 100.0 5.4E-38 1.2E-42 351.6 25.3 253 502-772 89-383 (391)
147 cd05093 PTKc_TrkB Catalytic do 100.0 1.7E-37 3.6E-42 332.6 28.0 259 503-766 3-282 (288)
148 cd06644 STKc_STK10_LOK Catalyt 100.0 1.1E-37 2.4E-42 334.4 26.5 260 504-773 11-277 (292)
149 cd05070 PTKc_Fyn_Yrk Catalytic 100.0 1.2E-37 2.5E-42 328.2 25.9 256 500-762 1-259 (260)
150 cd05034 PTKc_Src_like Catalyti 100.0 1.9E-37 4.1E-42 326.3 27.3 257 500-762 1-260 (261)
151 cd05075 PTKc_Axl Catalytic dom 100.0 2.1E-37 4.5E-42 328.0 27.7 254 507-763 1-271 (272)
152 cd05088 PTKc_Tie2 Catalytic do 100.0 1.3E-37 2.8E-42 336.4 26.5 271 502-777 4-294 (303)
153 cd05084 PTKc_Fes Catalytic dom 100.0 1.7E-37 3.7E-42 325.1 26.6 247 511-761 1-251 (252)
154 cd05109 PTKc_HER2 Catalytic do 100.0 2.8E-37 6E-42 329.0 28.5 259 503-766 5-271 (279)
155 cd07875 STKc_JNK1 Catalytic do 100.0 9.3E-38 2E-42 346.4 25.7 255 503-770 22-323 (364)
156 PTZ00266 NIMA-related protein 100.0 1.4E-37 3.1E-42 370.3 28.9 266 499-773 7-303 (1021)
157 cd05116 PTKc_Syk Catalytic dom 100.0 2.2E-37 4.7E-42 325.8 27.1 246 512-762 2-254 (257)
158 cd05053 PTKc_FGFR Catalytic do 100.0 1.6E-37 3.5E-42 333.0 26.5 262 499-764 6-292 (293)
159 cd05066 PTKc_EphR_A Catalytic 100.0 2.3E-37 5E-42 327.5 27.3 256 504-763 3-266 (267)
160 cd08224 STKc_Nek6_Nek7 Catalyt 100.0 2.9E-37 6.4E-42 325.4 28.0 257 505-764 2-266 (267)
161 cd05035 PTKc_Axl_like Catalyti 100.0 2.2E-37 4.8E-42 327.4 27.1 254 507-763 1-272 (273)
162 cd05091 PTKc_Ror2 Catalytic do 100.0 7E-38 1.5E-42 334.1 23.4 256 503-762 3-282 (283)
163 cd07874 STKc_JNK3 Catalytic do 100.0 7.5E-38 1.6E-42 345.8 24.4 254 503-769 15-315 (355)
164 KOG0577 Serine/threonine prote 100.0 2.5E-39 5.5E-44 350.7 12.2 256 505-773 26-286 (948)
165 cd05094 PTKc_TrkC Catalytic do 100.0 3.1E-37 6.7E-42 331.0 28.4 259 503-766 3-285 (291)
166 cd05069 PTKc_Yes Catalytic dom 100.0 3.1E-37 6.6E-42 325.2 27.8 255 501-762 2-259 (260)
167 cd08219 STKc_Nek3 Catalytic do 100.0 1.9E-37 4.1E-42 325.3 26.2 250 506-759 1-252 (255)
168 cd07863 STKc_CDK4 Catalytic do 100.0 6.7E-38 1.4E-42 334.9 23.0 253 506-768 1-288 (288)
169 cd05107 PTKc_PDGFR_beta Cataly 100.0 1.7E-37 3.7E-42 348.1 27.3 263 499-764 31-400 (401)
170 cd08229 STKc_Nek7 Catalytic do 100.0 1.3E-37 2.7E-42 328.8 24.5 258 505-764 2-266 (267)
171 cd00192 PTKc Catalytic domain 100.0 2.3E-37 4.9E-42 324.1 25.9 247 511-761 1-262 (262)
172 KOG1095 Protein tyrosine kinas 100.0 6E-38 1.3E-42 369.5 23.8 263 502-768 689-966 (1025)
173 cd07861 STKc_CDK1_euk Catalyti 100.0 1.3E-37 2.9E-42 331.8 24.4 254 506-768 1-285 (285)
174 cd06611 STKc_SLK_like Catalyti 100.0 1.1E-37 2.3E-42 332.2 23.5 258 504-771 4-268 (280)
175 KOG0599 Phosphorylase kinase g 100.0 6.9E-39 1.5E-43 320.4 13.2 260 503-772 15-290 (411)
176 cd05101 PTKc_FGFR2 Catalytic d 100.0 3.5E-37 7.6E-42 332.7 27.7 264 499-766 9-299 (304)
177 PHA03207 serine/threonine kina 100.0 2.4E-37 5.1E-42 346.8 27.2 254 503-773 90-383 (392)
178 cd05111 PTK_HER3 Pseudokinase 100.0 4.5E-37 9.7E-42 327.9 27.8 257 504-765 6-270 (279)
179 cd06643 STKc_SLK Catalytic dom 100.0 2.1E-37 4.5E-42 330.5 25.2 257 506-772 6-269 (282)
180 cd05099 PTKc_FGFR4 Catalytic d 100.0 5.2E-37 1.1E-41 333.2 28.7 263 500-766 7-296 (314)
181 cd08218 STKc_Nek1 Catalytic do 100.0 3E-37 6.6E-42 323.8 26.0 254 506-768 1-256 (256)
182 cd05065 PTKc_EphR_B Catalytic 100.0 4.9E-37 1.1E-41 325.1 27.7 256 504-763 3-268 (269)
183 cd05103 PTKc_VEGFR2 Catalytic 100.0 2.6E-37 5.6E-42 340.2 26.5 263 500-765 2-341 (343)
184 cd05115 PTKc_Zap-70 Catalytic 100.0 5.4E-37 1.2E-41 323.3 27.8 247 512-763 2-255 (257)
185 cd06615 PKc_MEK Catalytic doma 100.0 3.8E-37 8.2E-42 333.5 27.3 256 505-772 1-294 (308)
186 cd05063 PTKc_EphR_A2 Catalytic 100.0 6.2E-37 1.4E-41 323.9 28.2 257 503-763 3-267 (268)
187 cd05039 PTKc_Csk_like Catalyti 100.0 4.8E-37 1E-41 322.5 27.1 251 502-762 3-255 (256)
188 cd05055 PTKc_PDGFR Catalytic d 100.0 4.9E-37 1.1E-41 331.8 27.8 262 499-763 29-301 (302)
189 cd05630 STKc_GRK6 Catalytic do 100.0 2.2E-37 4.7E-42 331.7 24.7 255 506-770 1-266 (285)
190 cd05056 PTKc_FAK Catalytic dom 100.0 6.5E-37 1.4E-41 324.3 28.1 260 501-765 2-267 (270)
191 cd05580 STKc_PKA Catalytic dom 100.0 2.8E-37 6.1E-42 331.2 25.6 252 505-770 1-259 (290)
192 cd05574 STKc_phototropin_like 100.0 4.2E-37 9.2E-42 333.8 27.2 260 505-772 1-296 (316)
193 cd06654 STKc_PAK1 Catalytic do 100.0 4.4E-37 9.5E-42 331.1 27.0 262 501-774 16-279 (296)
194 cd06612 STKc_MST1_2 Catalytic 100.0 1.8E-37 3.9E-42 324.9 23.4 252 505-768 3-256 (256)
195 cd06637 STKc_TNIK Catalytic do 100.0 1.7E-37 3.8E-42 328.6 23.4 254 504-768 5-272 (272)
196 cd05073 PTKc_Hck Catalytic dom 100.0 6.2E-37 1.3E-41 322.9 27.1 256 500-762 1-259 (260)
197 cd05045 PTKc_RET Catalytic dom 100.0 8.4E-37 1.8E-41 327.3 28.5 256 506-765 1-288 (290)
198 cd08221 STKc_Nek9 Catalytic do 100.0 6.9E-37 1.5E-41 321.1 27.2 251 506-759 1-253 (256)
199 cd06631 STKc_YSK4 Catalytic do 100.0 3.7E-37 8.1E-42 325.0 25.3 254 506-768 1-265 (265)
200 cd06619 PKc_MKK5 Catalytic dom 100.0 4.3E-37 9.3E-42 327.9 25.8 251 505-771 1-259 (279)
201 cd07839 STKc_CDK5 Catalytic do 100.0 1.5E-37 3.3E-42 331.5 22.3 254 506-768 1-284 (284)
202 cd05082 PTKc_Csk Catalytic dom 100.0 5.4E-37 1.2E-41 322.3 26.2 251 502-763 3-256 (256)
203 cd05586 STKc_Sck1_like Catalyt 100.0 4.2E-38 9.1E-43 344.3 18.4 247 513-770 1-258 (330)
204 cd08227 PK_STRAD_alpha Pseudok 100.0 2.8E-37 6.2E-42 337.3 24.9 256 509-772 2-314 (327)
205 cd06655 STKc_PAK2 Catalytic do 100.0 8.2E-37 1.8E-41 329.1 28.1 261 501-773 15-277 (296)
206 cd07878 STKc_p38beta_MAPK11 Ca 100.0 1.3E-37 2.9E-42 342.1 22.4 256 503-772 13-305 (343)
207 cd05632 STKc_GRK5 Catalytic do 100.0 5.5E-37 1.2E-41 328.4 26.6 255 507-770 2-266 (285)
208 cd06609 STKc_MST3_like Catalyt 100.0 3.6E-37 7.7E-42 327.0 24.8 257 505-773 1-259 (274)
209 KOG0983 Mitogen-activated prot 100.0 9.2E-38 2E-42 312.7 18.7 257 502-769 89-353 (391)
210 cd05051 PTKc_DDR Catalytic dom 100.0 4.3E-37 9.3E-42 330.0 25.4 255 504-761 4-295 (296)
211 cd06628 STKc_MAPKKK_Byr2_like 100.0 4.7E-37 1E-41 324.4 25.2 253 506-768 1-267 (267)
212 cd05036 PTKc_ALK_LTK Catalytic 100.0 1.1E-36 2.3E-41 324.3 28.2 256 502-761 3-276 (277)
213 cd05043 PTK_Ryk Pseudokinase d 100.0 1.1E-36 2.3E-41 324.4 28.1 260 503-766 4-279 (280)
214 cd05060 PTKc_Syk_like Catalyti 100.0 9.1E-37 2E-41 320.8 27.3 247 511-763 1-255 (257)
215 cd05085 PTKc_Fer Catalytic dom 100.0 1E-36 2.3E-41 318.5 27.4 247 511-761 1-249 (250)
216 PHA03209 serine/threonine kina 100.0 5E-37 1.1E-41 339.9 26.1 249 504-770 65-356 (357)
217 cd06651 STKc_MEKK3 Catalytic d 100.0 5.7E-37 1.2E-41 324.3 25.4 255 505-769 2-265 (266)
218 cd07847 STKc_CDKL1_4 Catalytic 100.0 3.8E-37 8.3E-42 328.2 24.2 255 505-768 1-286 (286)
219 cd05097 PTKc_DDR_like Catalyti 100.0 5.2E-37 1.1E-41 329.9 25.4 257 502-761 2-294 (295)
220 cd06613 STKc_MAP4K3_like Catal 100.0 6.2E-37 1.3E-41 322.0 25.3 251 504-758 2-259 (262)
221 cd05040 PTKc_Ack_like Catalyti 100.0 5.5E-37 1.2E-41 322.0 24.9 247 511-761 1-256 (257)
222 PHA03211 serine/threonine kina 100.0 4.3E-36 9.3E-41 341.4 34.0 250 504-770 168-460 (461)
223 KOG4257 Focal adhesion tyrosin 100.0 7.2E-38 1.6E-42 341.2 18.4 263 498-765 382-651 (974)
224 cd06622 PKc_MAPKK_PBS2_like Ca 100.0 4.6E-37 9.9E-42 328.3 24.5 259 505-774 1-271 (286)
225 cd06646 STKc_MAP4K5 Catalytic 100.0 3.2E-37 6.9E-42 325.9 22.8 251 504-759 8-265 (267)
226 KOG0586 Serine/threonine prote 100.0 2E-37 4.4E-42 341.7 21.6 253 501-759 52-306 (596)
227 cd05112 PTKc_Itk Catalytic dom 100.0 1.6E-36 3.5E-41 318.3 27.6 250 505-760 4-255 (256)
228 cd08217 STKc_Nek2 Catalytic do 100.0 9.9E-37 2.2E-41 320.1 26.1 250 506-758 1-261 (265)
229 cd06656 STKc_PAK3 Catalytic do 100.0 5E-37 1.1E-41 330.9 24.3 260 503-774 17-278 (297)
230 cd05041 PTKc_Fes_like Catalyti 100.0 1.3E-36 2.9E-41 318.0 26.8 247 511-761 1-250 (251)
231 cd05092 PTKc_TrkA Catalytic do 100.0 9.6E-37 2.1E-41 325.4 26.2 254 503-761 3-279 (280)
232 cd05080 PTKc_Tyk2_rpt2 Catalyt 100.0 1.5E-36 3.3E-41 324.0 27.7 255 505-764 3-282 (283)
233 cd05100 PTKc_FGFR3 Catalytic d 100.0 1.5E-36 3.2E-41 332.7 28.1 264 498-765 5-295 (334)
234 cd05057 PTKc_EGFR_like Catalyt 100.0 2.1E-36 4.5E-41 322.3 28.4 257 504-765 6-270 (279)
235 cd06605 PKc_MAPKK Catalytic do 100.0 3.6E-37 7.7E-42 324.7 21.9 254 505-770 1-262 (265)
236 cd05095 PTKc_DDR2 Catalytic do 100.0 1.2E-36 2.5E-41 327.4 26.4 256 503-761 3-295 (296)
237 cd05050 PTKc_Musk Catalytic do 100.0 1.2E-36 2.6E-41 325.6 26.2 255 503-761 3-287 (288)
238 cd06632 STKc_MEKK1_plant Catal 100.0 1E-36 2.2E-41 319.3 24.9 248 506-757 1-253 (258)
239 KOG0584 Serine/threonine prote 100.0 3.4E-38 7.5E-43 348.0 14.3 253 508-771 43-302 (632)
240 cd06652 STKc_MEKK2 Catalytic d 100.0 1.9E-36 4.2E-41 319.8 26.6 254 505-768 2-264 (265)
241 cd07832 STKc_CCRK Catalytic do 100.0 1.2E-36 2.7E-41 324.3 25.2 254 506-768 1-285 (286)
242 cd05047 PTKc_Tie Catalytic dom 100.0 2.1E-36 4.6E-41 320.8 26.9 249 511-764 1-269 (270)
243 cd08220 STKc_Nek8 Catalytic do 100.0 1.6E-36 3.5E-41 317.7 25.3 248 506-757 1-251 (256)
244 cd05058 PTKc_Met_Ron Catalytic 100.0 2.5E-36 5.5E-41 317.9 26.8 250 511-764 1-260 (262)
245 cd07845 STKc_CDK10 Catalytic d 100.0 1.1E-36 2.4E-41 329.6 24.8 264 504-776 6-301 (309)
246 cd06645 STKc_MAP4K3 Catalytic 100.0 5.6E-37 1.2E-41 324.1 21.7 250 504-758 8-264 (267)
247 cd06640 STKc_MST4 Catalytic do 100.0 1.4E-36 3.1E-41 323.3 24.9 256 505-772 4-260 (277)
248 cd07868 STKc_CDK8 Catalytic do 100.0 9.9E-37 2.2E-41 331.0 24.0 246 510-768 6-317 (317)
249 KOG0612 Rho-associated, coiled 100.0 2.1E-38 4.5E-43 366.2 11.4 259 502-770 72-343 (1317)
250 cd07841 STKc_CDK7 Catalytic do 100.0 1.6E-36 3.5E-41 326.0 25.4 261 506-775 1-292 (298)
251 cd06624 STKc_ASK Catalytic dom 100.0 2.8E-36 6E-41 319.1 26.5 255 504-768 7-268 (268)
252 cd06638 STKc_myosinIIIA Cataly 100.0 1.9E-36 4.2E-41 323.2 25.5 253 501-758 14-282 (286)
253 cd05081 PTKc_Jak2_Jak3_rpt2 Ca 100.0 3.7E-36 8E-41 321.0 27.6 255 505-763 4-283 (284)
254 cd06636 STKc_MAP4K4_6 Catalyti 100.0 1.2E-36 2.6E-41 324.4 23.7 254 504-768 15-282 (282)
255 cd07846 STKc_CDKL2_3 Catalytic 100.0 7.7E-37 1.7E-41 326.1 22.2 255 505-768 1-286 (286)
256 cd06623 PKc_MAPKK_plant_like C 100.0 2.8E-36 6.1E-41 317.1 26.2 256 505-771 1-262 (264)
257 cd05046 PTK_CCK4 Pseudokinase 100.0 2.5E-36 5.4E-41 320.5 25.9 255 504-761 4-274 (275)
258 cd06610 STKc_OSR1_SPAK Catalyt 100.0 1.9E-36 4.1E-41 318.9 24.8 255 505-768 1-267 (267)
259 cd05578 STKc_Yank1 Catalytic d 100.0 6.1E-37 1.3E-41 322.1 20.5 251 506-768 1-258 (258)
260 cd05572 STKc_cGK_PKG Catalytic 100.0 2.6E-36 5.7E-41 318.0 25.3 248 513-770 1-257 (262)
261 PRK13184 pknD serine/threonine 100.0 2.8E-36 6E-41 358.1 28.2 258 505-765 2-292 (932)
262 cd05110 PTKc_HER4 Catalytic do 100.0 3.8E-36 8.3E-41 324.8 26.9 260 504-768 6-273 (303)
263 cd06639 STKc_myosinIIIB Cataly 100.0 4.1E-36 8.9E-41 322.0 26.9 256 503-769 20-291 (291)
264 cd05079 PTKc_Jak1_rpt2 Catalyt 100.0 2.8E-36 6.1E-41 322.3 25.5 255 505-763 4-283 (284)
265 cd06617 PKc_MKK3_6 Catalytic d 100.0 3.4E-36 7.3E-41 320.7 25.4 257 505-773 1-269 (283)
266 cd07860 STKc_CDK2_3 Catalytic 100.0 1.9E-36 4E-41 323.0 23.3 254 506-768 1-284 (284)
267 cd06626 STKc_MEKK4 Catalytic d 100.0 4.1E-36 9E-41 316.1 25.3 248 506-757 1-259 (264)
268 KOG1094 Discoidin domain recep 100.0 3.3E-36 7.1E-41 327.0 24.9 260 500-762 533-803 (807)
269 cd06630 STKc_MEKK1 Catalytic d 100.0 2.5E-36 5.4E-41 318.8 23.6 255 506-769 1-268 (268)
270 cd08225 STKc_Nek5 Catalytic do 100.0 3E-36 6.4E-41 315.9 23.7 254 506-768 1-257 (257)
271 cd07843 STKc_CDC2L1 Catalytic 100.0 2.1E-36 4.6E-41 324.5 23.0 255 505-768 5-293 (293)
272 cd07844 STKc_PCTAIRE_like Cata 100.0 2.8E-36 6.1E-41 323.0 23.8 255 504-768 4-291 (291)
273 PHA03210 serine/threonine kina 100.0 3E-36 6.5E-41 347.9 25.7 259 503-770 146-459 (501)
274 smart00219 TyrKc Tyrosine kina 100.0 6E-36 1.3E-40 313.2 25.6 250 507-760 1-258 (258)
275 cd05083 PTKc_Chk Catalytic dom 100.0 5.1E-36 1.1E-40 314.6 25.0 247 503-761 4-252 (254)
276 cd06606 STKc_MAPKKK Catalytic 100.0 6.9E-36 1.5E-40 311.8 25.9 254 506-768 1-260 (260)
277 cd06642 STKc_STK25-YSK1 Cataly 100.0 2.6E-36 5.6E-41 321.2 23.0 253 505-769 4-257 (277)
278 KOG4645 MAPKKK (MAP kinase kin 100.0 2E-38 4.4E-43 370.5 7.1 258 506-773 1236-1502(1509)
279 cd08215 STKc_Nek Catalytic dom 100.0 6.2E-36 1.3E-40 312.5 25.2 254 506-768 1-258 (258)
280 cd07833 STKc_CDKL Catalytic do 100.0 3.9E-36 8.4E-41 320.7 24.0 255 505-768 1-288 (288)
281 cd05609 STKc_MAST Catalytic do 100.0 9.2E-36 2E-40 322.0 26.9 261 505-771 1-279 (305)
282 cd06647 STKc_PAK_I Catalytic d 100.0 5.6E-36 1.2E-40 322.0 24.8 258 503-772 17-276 (293)
283 cd05038 PTKc_Jak_rpt2 Catalyti 100.0 5.4E-36 1.2E-40 318.7 24.3 255 505-763 4-283 (284)
284 cd06608 STKc_myosinIII_like Ca 100.0 3.9E-36 8.4E-41 317.7 23.0 250 503-757 4-270 (275)
285 cd06629 STKc_MAPKKK_Bck1_like 100.0 6.6E-36 1.4E-40 316.8 24.7 254 506-768 2-272 (272)
286 PLN00009 cyclin-dependent kina 100.0 8.5E-36 1.9E-40 320.0 25.8 259 505-772 2-291 (294)
287 cd06607 STKc_TAO Catalytic dom 100.0 1E-35 2.3E-40 321.8 26.6 257 503-772 13-274 (307)
288 cd06627 STKc_Cdc7_like Catalyt 100.0 1.2E-35 2.6E-40 310.2 26.0 253 506-768 1-254 (254)
289 cd06614 STKc_PAK Catalytic dom 100.0 7.7E-36 1.7E-40 319.0 24.9 257 503-770 17-275 (286)
290 cd06658 STKc_PAK5 Catalytic do 100.0 3.6E-36 7.8E-41 323.5 22.4 255 505-771 22-278 (292)
291 cd07850 STKc_JNK Catalytic dom 100.0 7.5E-36 1.6E-40 329.7 25.3 254 503-769 14-315 (353)
292 cd07837 STKc_CdkB_plant Cataly 100.0 6E-36 1.3E-40 320.9 23.9 256 505-769 1-295 (295)
293 cd06641 STKc_MST3 Catalytic do 100.0 1.9E-35 4.1E-40 314.7 27.0 253 506-770 5-258 (277)
294 cd05076 PTK_Tyk2_rpt1 Pseudoki 100.0 8.1E-36 1.8E-40 317.6 24.0 238 512-760 2-273 (274)
295 cd05077 PTK_Jak1_rpt1 Pseudoki 100.0 1.2E-35 2.7E-40 314.0 25.1 239 511-760 1-261 (262)
296 cd08528 STKc_Nek10 Catalytic d 100.0 1.6E-35 3.4E-40 313.3 25.8 253 506-761 1-268 (269)
297 cd07867 STKc_CDC2L6 Catalytic 100.0 4.6E-36 1E-40 325.4 22.2 246 510-768 6-317 (317)
298 cd05042 PTKc_Aatyk Catalytic d 100.0 2.1E-35 4.6E-40 312.6 26.7 246 511-760 1-267 (269)
299 cd05044 PTKc_c-ros Catalytic d 100.0 7.9E-36 1.7E-40 315.4 23.4 247 511-761 1-268 (269)
300 cd07870 STKc_PFTAIRE2 Catalyti 100.0 1.1E-35 2.3E-40 318.8 24.6 254 505-768 5-291 (291)
301 KOG0614 cGMP-dependent protein 100.0 1.2E-37 2.5E-42 333.4 9.3 258 502-769 417-681 (732)
302 cd05074 PTKc_Tyro3 Catalytic d 100.0 2.1E-35 4.6E-40 312.8 26.4 254 507-763 1-272 (273)
303 cd06917 STKc_NAK1_like Catalyt 100.0 1.2E-35 2.5E-40 315.7 24.3 256 506-773 2-263 (277)
304 cd06659 STKc_PAK6 Catalytic do 100.0 7.4E-36 1.6E-40 321.9 23.0 252 506-769 22-275 (297)
305 cd05087 PTKc_Aatyk1_Aatyk3 Cat 100.0 2.8E-35 6E-40 311.9 26.8 246 511-760 1-267 (269)
306 cd07835 STKc_CDK1_like Catalyt 100.0 9E-36 2E-40 317.6 23.2 253 507-768 1-283 (283)
307 cd05078 PTK_Jak2_Jak3_rpt1 Pse 100.0 4E-36 8.7E-41 316.5 20.0 239 511-760 1-257 (258)
308 cd05122 PKc_STE Catalytic doma 100.0 2.4E-35 5.2E-40 306.4 25.6 247 506-758 1-250 (253)
309 cd05037 PTK_Jak_rpt1 Pseudokin 100.0 1.2E-35 2.7E-40 311.6 23.6 237 511-760 1-258 (259)
310 KOG4278 Protein tyrosine kinas 100.0 3.2E-36 7E-41 327.4 19.5 261 498-764 260-524 (1157)
311 cd07865 STKc_CDK9 Catalytic do 100.0 1.3E-35 2.8E-40 320.2 24.1 258 502-768 9-310 (310)
312 cd06648 STKc_PAK_II Catalytic 100.0 1.9E-35 4.2E-40 316.4 25.2 255 506-772 20-276 (285)
313 cd05581 STKc_PDK1 Catalytic do 100.0 1E-35 2.2E-40 315.7 22.5 253 505-768 1-280 (280)
314 cd05579 STKc_MAST_like Catalyt 100.0 1.1E-35 2.4E-40 312.1 22.5 251 513-771 1-263 (265)
315 cd06620 PKc_MAPKK_Byr1_like Ca 100.0 9.9E-36 2.2E-40 318.0 22.3 254 504-770 4-271 (284)
316 cd07836 STKc_Pho85 Catalytic d 100.0 1.2E-35 2.7E-40 316.5 22.9 253 506-768 1-284 (284)
317 cd06621 PKc_MAPKK_Pek1_like Ca 100.0 5.5E-35 1.2E-39 312.9 27.6 258 505-774 1-275 (287)
318 cd07834 STKc_MAPK Catalytic do 100.0 1.5E-35 3.2E-40 323.7 23.4 259 506-774 1-298 (330)
319 KOG4236 Serine/threonine prote 100.0 5.9E-37 1.3E-41 328.4 11.9 244 510-757 569-817 (888)
320 cd05577 STKc_GRK Catalytic dom 100.0 2.3E-35 5E-40 314.0 24.1 249 513-770 1-259 (277)
321 cd07831 STKc_MOK Catalytic dom 100.0 2.7E-35 5.9E-40 313.2 24.6 250 507-768 1-282 (282)
322 cd05633 STKc_GRK3 Catalytic do 100.0 2E-35 4.3E-40 315.5 23.2 249 512-772 1-262 (279)
323 cd06635 STKc_TAO1 Catalytic do 100.0 5.2E-35 1.1E-39 318.1 26.8 248 504-758 24-276 (317)
324 KOG0986 G protein-coupled rece 100.0 1E-36 2.2E-41 323.3 12.8 260 503-771 183-452 (591)
325 cd06616 PKc_MKK4 Catalytic dom 100.0 1.8E-35 4E-40 316.2 22.9 258 505-774 4-276 (288)
326 cd05118 STKc_CMGC Catalytic do 100.0 2E-35 4.3E-40 314.2 22.5 253 507-768 1-283 (283)
327 cd05086 PTKc_Aatyk2 Catalytic 100.0 5.9E-35 1.3E-39 309.5 26.0 246 511-760 1-266 (268)
328 cd07858 STKc_TEY_MAPK_plant Ca 100.0 2.4E-35 5.2E-40 323.6 23.8 261 504-774 4-300 (337)
329 cd06653 STKc_MEKK3_like_1 Cata 100.0 6.7E-35 1.5E-39 308.1 26.3 250 505-758 2-260 (264)
330 cd07842 STKc_CDK8_like Catalyt 100.0 1.9E-35 4.2E-40 319.9 22.4 254 506-768 1-316 (316)
331 KOG0196 Tyrosine kinase, EPH ( 100.0 2.1E-36 4.5E-41 338.1 15.0 264 499-766 623-894 (996)
332 cd07864 STKc_CDK12 Catalytic d 100.0 2.9E-35 6.2E-40 316.7 22.8 253 502-757 4-297 (302)
333 cd08530 STKc_CNK2-like Catalyt 100.0 7.6E-35 1.6E-39 304.8 25.0 248 506-758 1-252 (256)
334 KOG0696 Serine/threonine prote 100.0 4.5E-36 9.7E-41 314.0 15.0 245 502-751 346-593 (683)
335 cd05611 STKc_Rim15_like Cataly 100.0 9.1E-35 2E-39 305.9 24.7 251 511-771 2-257 (260)
336 cd06633 STKc_TAO3 Catalytic do 100.0 1.5E-34 3.3E-39 314.0 27.1 254 505-771 21-279 (313)
337 cd06618 PKc_MKK7 Catalytic dom 100.0 8.6E-35 1.9E-39 312.9 25.0 264 500-774 10-282 (296)
338 PHA03390 pk1 serine/threonine- 100.0 7.5E-35 1.6E-39 309.0 23.6 246 505-770 14-267 (267)
339 cd07855 STKc_ERK5 Catalytic do 100.0 3.6E-35 7.8E-40 321.7 21.8 257 505-771 5-300 (334)
340 KOG0199 ACK and related non-re 100.0 7.8E-36 1.7E-40 329.1 16.3 254 502-760 107-369 (1039)
341 cd08226 PK_STRAD_beta Pseudoki 100.0 6E-35 1.3E-39 319.2 23.2 256 511-774 4-317 (328)
342 cd07880 STKc_p38gamma_MAPK12 C 100.0 1.3E-34 2.9E-39 318.7 26.0 258 503-774 13-307 (343)
343 cd07866 STKc_BUR1 Catalytic do 100.0 5.5E-35 1.2E-39 315.4 22.4 256 504-768 7-311 (311)
344 cd07849 STKc_ERK1_2_like Catal 100.0 8.8E-35 1.9E-39 318.9 23.7 257 504-772 4-299 (336)
345 cd07840 STKc_CDK9_like Catalyt 100.0 1.2E-34 2.6E-39 308.5 24.1 253 507-768 1-287 (287)
346 cd05606 STKc_beta_ARK Catalyti 100.0 1.6E-34 3.4E-39 308.2 24.9 249 512-771 1-261 (278)
347 KOG0662 Cyclin-dependent kinas 100.0 7.9E-36 1.7E-40 282.2 13.0 257 506-771 3-289 (292)
348 cd08222 STKc_Nek11 Catalytic d 100.0 8.2E-35 1.8E-39 306.3 22.1 253 506-768 1-260 (260)
349 cd07838 STKc_CDK4_6_like Catal 100.0 1.5E-34 3.2E-39 308.2 24.0 252 507-768 1-287 (287)
350 cd05123 STKc_AGC Catalytic dom 100.0 1.4E-34 3.1E-39 301.9 23.2 245 513-768 1-250 (250)
351 cd07852 STKc_MAPK15 Catalytic 100.0 1.1E-34 2.3E-39 318.3 23.3 258 503-771 5-301 (337)
352 PHA02882 putative serine/threo 100.0 2.6E-34 5.7E-39 309.3 25.2 256 501-760 8-293 (294)
353 cd05613 STKc_MSK1_N N-terminal 100.0 2.2E-34 4.7E-39 308.4 24.5 256 506-772 1-275 (290)
354 PTZ00024 cyclin-dependent prot 100.0 1.9E-34 4E-39 316.0 24.3 263 505-777 8-325 (335)
355 cd06657 STKc_PAK4 Catalytic do 100.0 1.7E-34 3.7E-39 310.6 23.6 248 510-769 25-274 (292)
356 cd08216 PK_STRAD Pseudokinase 100.0 1.2E-34 2.6E-39 314.0 22.4 257 507-772 4-302 (314)
357 KOG0695 Serine/threonine prote 100.0 4E-35 8.7E-40 299.9 16.5 263 499-771 244-522 (593)
358 cd07879 STKc_p38delta_MAPK13 C 100.0 2E-34 4.3E-39 317.1 23.4 255 504-773 14-305 (342)
359 cd05583 STKc_MSK_N N-terminal 100.0 2.3E-34 5E-39 308.0 23.2 259 506-772 1-273 (288)
360 KOG0671 LAMMER dual specificit 100.0 2.5E-35 5.5E-40 308.4 15.3 257 501-772 85-413 (415)
361 cd06634 STKc_TAO2 Catalytic do 100.0 2.7E-34 5.8E-39 311.2 23.8 254 504-770 14-272 (308)
362 cd07829 STKc_CDK_like Catalyti 100.0 1.6E-34 3.5E-39 307.1 21.6 253 507-768 1-282 (282)
363 cd07851 STKc_p38 Catalytic dom 100.0 2.2E-34 4.7E-39 316.9 22.1 258 503-774 13-307 (343)
364 cd07856 STKc_Sty1_Hog1 Catalyt 100.0 7.1E-34 1.5E-38 311.0 25.9 257 503-773 8-296 (328)
365 cd07877 STKc_p38alpha_MAPK14 C 100.0 7E-34 1.5E-38 313.2 25.8 255 503-771 15-306 (345)
366 KOG0666 Cyclin C-dependent kin 100.0 1.6E-35 3.4E-40 301.3 11.6 258 505-771 24-343 (438)
367 KOG0607 MAP kinase-interacting 100.0 5.8E-35 1.3E-39 297.9 14.5 255 507-774 79-370 (463)
368 cd07854 STKc_MAPK4_6 Catalytic 100.0 4.7E-34 1E-38 314.1 22.9 254 504-770 4-305 (342)
369 KOG1006 Mitogen-activated prot 100.0 8.8E-36 1.9E-40 297.7 7.7 257 498-758 57-326 (361)
370 cd05610 STKc_MASTL Catalytic d 100.0 1.4E-33 3E-38 335.9 28.0 148 504-654 3-152 (669)
371 cd07857 STKc_MPK1 Catalytic do 100.0 1.1E-33 2.4E-38 309.6 25.1 256 506-771 1-298 (332)
372 cd07830 STKc_MAK_like Catalyti 100.0 1.1E-33 2.5E-38 301.1 23.8 251 507-768 1-283 (283)
373 KOG0587 Traf2- and Nck-interac 100.0 9.8E-34 2.1E-38 321.4 19.5 255 504-769 18-286 (953)
374 KOG0604 MAP kinase-activated p 100.0 6.1E-34 1.3E-38 288.7 15.1 250 503-770 59-327 (400)
375 KOG4250 TANK binding protein k 100.0 3.9E-34 8.4E-39 319.4 14.9 256 507-766 15-313 (732)
376 KOG0603 Ribosomal protein S6 k 100.0 1.5E-33 3.2E-38 312.8 17.9 243 503-768 320-566 (612)
377 KOG1151 Tousled-like protein k 100.0 2.7E-34 5.7E-39 302.8 11.2 260 502-768 460-744 (775)
378 KOG1035 eIF-2alpha kinase GCN2 100.0 9.3E-34 2E-38 330.4 16.7 247 504-758 478-870 (1351)
379 KOG0608 Warts/lats-like serine 100.0 1.6E-33 3.4E-38 307.6 15.5 258 504-771 628-934 (1034)
380 cd05576 STKc_RPK118_like Catal 100.0 7E-33 1.5E-37 288.5 19.6 228 516-768 4-237 (237)
381 KOG0200 Fibroblast/platelet-de 100.0 3.2E-32 7E-37 319.8 25.6 263 499-765 290-581 (609)
382 KOG0669 Cyclin T-dependent kin 100.0 1.5E-34 3.2E-39 286.6 4.1 262 502-772 14-322 (376)
383 smart00220 S_TKc Serine/Threon 100.0 3.2E-31 6.9E-36 273.2 22.5 237 517-758 1-240 (244)
384 KOG1025 Epidermal growth facto 100.0 4.4E-32 9.5E-37 304.1 17.1 254 507-765 698-959 (1177)
385 KOG0670 U4/U6-associated splic 100.0 2.2E-32 4.9E-37 293.7 12.9 256 501-770 428-751 (752)
386 KOG3653 Transforming growth fa 100.0 1.4E-31 3.1E-36 286.4 17.1 256 505-768 210-508 (534)
387 PLN00113 leucine-rich repeat r 100.0 1.8E-31 3.9E-36 332.2 20.5 247 504-765 689-953 (968)
388 KOG1024 Receptor-like protein 100.0 4.1E-31 8.8E-36 276.0 19.4 263 501-767 280-559 (563)
389 KOG0668 Casein kinase II, alph 100.0 4.3E-32 9.3E-37 265.9 10.1 253 504-774 37-331 (338)
390 PLN03225 Serine/threonine-prot 100.0 9.1E-31 2E-35 304.8 22.4 258 502-774 129-459 (566)
391 KOG2052 Activin A type IB rece 100.0 1.1E-30 2.4E-35 277.7 20.4 256 502-765 208-505 (513)
392 PLN03224 probable serine/threo 100.0 1.9E-30 4.1E-35 295.5 23.1 260 503-770 143-505 (507)
393 KOG1290 Serine/threonine prote 100.0 2.4E-30 5.2E-35 277.4 21.4 255 504-772 77-557 (590)
394 KOG0984 Mitogen-activated prot 100.0 9.1E-31 2E-35 253.4 11.9 215 500-718 41-265 (282)
395 KOG0664 Nemo-like MAPK-related 100.0 1.2E-31 2.6E-36 268.3 2.2 250 506-759 54-343 (449)
396 KOG0665 Jun-N-terminal kinase 100.0 5.8E-30 1.3E-34 262.6 11.4 252 504-769 16-314 (369)
397 KOG0576 Mitogen-activated prot 100.0 1.5E-30 3.2E-35 287.3 6.5 251 502-757 12-269 (829)
398 KOG1027 Serine/threonine prote 100.0 4.2E-30 9E-35 290.8 9.5 243 509-768 513-770 (903)
399 KOG1165 Casein kinase (serine/ 100.0 3E-28 6.5E-33 250.5 21.4 258 502-766 25-302 (449)
400 cd00180 PKc Catalytic domain o 100.0 6.8E-28 1.5E-32 241.6 22.8 211 513-759 1-214 (215)
401 KOG1152 Signal transduction se 100.0 2.6E-29 5.7E-34 273.4 9.2 200 504-708 560-771 (772)
402 smart00221 STYKc Protein kinas 99.9 1.6E-26 3.5E-31 236.2 22.1 199 507-708 1-202 (225)
403 KOG1345 Serine/threonine kinas 99.9 9.5E-28 2.1E-32 240.8 9.1 245 504-758 23-283 (378)
404 KOG1167 Serine/threonine prote 99.9 4.1E-27 8.8E-32 250.2 10.7 253 501-769 32-385 (418)
405 KOG1163 Casein kinase (serine/ 99.9 1.5E-25 3.3E-30 221.6 17.7 258 501-765 11-286 (341)
406 KOG1164 Casein kinase (serine/ 99.9 6.3E-25 1.4E-29 239.8 23.5 256 506-766 19-300 (322)
407 PLN00181 protein SPA1-RELATED; 99.9 1.6E-26 3.6E-31 281.3 11.3 202 558-771 27-271 (793)
408 smart00750 KIND kinase non-cat 99.9 6.6E-25 1.4E-29 217.4 14.9 163 588-765 1-171 (176)
409 COG0515 SPS1 Serine/threonine 99.9 1.2E-22 2.7E-27 215.8 26.3 249 507-759 2-275 (384)
410 PRK09188 serine/threonine prot 99.9 7.6E-23 1.6E-27 224.2 16.8 168 501-682 14-196 (365)
411 KOG0590 Checkpoint kinase and 99.9 5.8E-24 1.3E-28 247.4 6.0 260 508-777 321-597 (601)
412 KOG0195 Integrin-linked kinase 99.9 2.3E-23 5E-28 209.0 8.4 252 505-764 190-447 (448)
413 KOG0603 Ribosomal protein S6 k 99.9 1.2E-23 2.6E-28 234.2 1.7 242 512-771 1-249 (612)
414 PRK10359 lipopolysaccharide co 99.8 8.2E-21 1.8E-25 194.5 11.6 175 501-700 27-216 (232)
415 KOG1240 Protein kinase contain 99.8 3.8E-21 8.3E-26 223.1 9.1 261 506-775 24-316 (1431)
416 KOG4158 BRPK/PTEN-induced prot 99.8 2.5E-20 5.3E-25 196.1 12.5 254 501-759 153-510 (598)
417 cd05147 RIO1_euk RIO kinase fa 99.8 1.9E-20 4.2E-25 188.6 10.7 142 510-657 2-168 (190)
418 PRK12274 serine/threonine prot 99.8 1.8E-19 3.8E-24 181.1 15.3 187 508-709 5-210 (218)
419 PF14531 Kinase-like: Kinase-l 99.8 6E-20 1.3E-24 193.5 12.5 233 506-750 13-288 (288)
420 KOG1166 Mitotic checkpoint ser 99.8 6.2E-19 1.3E-23 209.3 19.7 251 499-770 692-960 (974)
421 cd05145 RIO1_like RIO kinase f 99.8 3.4E-19 7.3E-24 179.7 13.8 142 510-658 2-169 (190)
422 KOG0606 Microtubule-associated 99.8 1.3E-19 2.8E-24 210.7 10.0 220 505-769 83-319 (1205)
423 PRK10345 hypothetical protein; 99.8 4E-18 8.8E-23 173.8 14.3 134 510-653 7-156 (210)
424 PRK14879 serine/threonine prot 99.7 3.7E-17 8E-22 167.1 14.7 136 511-655 2-143 (211)
425 KOG1023 Natriuretic peptide re 99.7 3.7E-17 8E-22 182.8 11.9 208 557-765 1-226 (484)
426 TIGR03724 arch_bud32 Kae1-asso 99.7 1.5E-16 3.3E-21 161.0 14.1 133 512-656 1-139 (199)
427 PF13426 PAS_9: PAS domain; PD 99.7 4.7E-16 1E-20 138.8 14.2 104 140-243 1-104 (104)
428 smart00090 RIO RIO-like kinase 99.7 1.6E-16 3.5E-21 165.6 12.7 145 506-657 29-199 (237)
429 cd05144 RIO2_C RIO kinase fami 99.7 3.2E-16 6.9E-21 159.0 12.2 137 507-656 17-175 (198)
430 PRK09605 bifunctional UGMP fam 99.7 8.2E-16 1.8E-20 179.3 16.5 138 505-655 333-476 (535)
431 KOG1033 eIF-2alpha kinase PEK/ 99.6 2.4E-16 5.2E-21 173.2 6.6 169 577-754 330-507 (516)
432 KOG0590 Checkpoint kinase and 99.6 2E-17 4.4E-22 192.8 -3.0 249 506-756 21-283 (601)
433 cd05119 RIO RIO kinase family, 99.6 3.5E-15 7.5E-20 149.5 12.0 138 510-657 2-165 (187)
434 PF08448 PAS_4: PAS fold; Int 99.6 9.6E-15 2.1E-19 131.8 13.4 110 136-246 1-110 (110)
435 PF00989 PAS: PAS fold; Inter 99.6 1.4E-14 3E-19 131.4 13.2 112 130-241 1-113 (113)
436 cd05120 APH_ChoK_like Aminogly 99.6 2E-14 4.4E-19 136.9 12.7 134 509-655 2-138 (155)
437 PRK01723 3-deoxy-D-manno-octul 99.6 3.8E-14 8.2E-19 148.1 14.2 136 511-655 37-191 (239)
438 PRK11091 aerobic respiration c 99.5 7.1E-14 1.5E-18 170.7 17.2 151 128-287 153-303 (779)
439 PRK13557 histidine kinase; Pro 99.5 2.2E-13 4.7E-18 158.6 17.2 150 129-285 29-181 (540)
440 PRK13559 hypothetical protein; 99.5 3.6E-13 7.8E-18 149.2 17.1 144 129-285 42-188 (361)
441 KOG0601 Cyclin-dependent kinas 99.4 2.5E-13 5.5E-18 152.3 9.5 247 504-757 113-377 (524)
442 KOG1243 Protein kinase [Genera 99.4 5.4E-12 1.2E-16 142.7 17.6 222 528-763 36-263 (690)
443 TIGR01982 UbiB 2-polyprenylphe 99.4 4.3E-12 9.3E-17 143.9 13.1 148 505-658 118-309 (437)
444 KOG0606 Microtubule-associated 99.3 2.9E-13 6.3E-18 158.4 3.3 266 500-771 799-1098(1205)
445 PRK04750 ubiB putative ubiquin 99.3 2.2E-12 4.8E-17 148.1 8.2 148 501-658 116-316 (537)
446 TIGR02938 nifL_nitrog nitrogen 99.3 1.5E-11 3.3E-16 141.0 12.4 126 129-254 3-128 (494)
447 KOG1266 Protein kinase [Signal 99.3 9.5E-12 2.1E-16 129.3 8.5 199 555-759 119-331 (458)
448 KOG0601 Cyclin-dependent kinas 99.3 3.6E-12 7.8E-17 143.1 5.7 248 503-760 263-515 (524)
449 TIGR00229 sensory_box PAS doma 99.3 8.1E-11 1.8E-15 102.7 13.2 120 130-250 3-123 (124)
450 cd05151 ChoK Choline Kinase (C 99.2 2.4E-11 5.3E-16 119.3 9.8 130 510-655 3-136 (170)
451 COG4248 Uncharacterized protei 99.2 2.4E-10 5.3E-15 122.6 17.7 260 507-776 13-313 (637)
452 PRK13560 hypothetical protein; 99.2 7.6E-11 1.6E-15 144.2 16.0 129 127-255 201-331 (807)
453 PRK10060 RNase II stability mo 99.2 2.3E-10 5E-15 137.1 17.6 130 130-260 111-242 (663)
454 PRK13558 bacterio-opsin activa 99.2 2.1E-10 4.5E-15 137.8 16.9 127 130-256 148-277 (665)
455 PRK11073 glnL nitrogen regulat 99.2 1E-10 2.2E-15 128.8 12.7 144 129-286 6-149 (348)
456 TIGR02040 PpsR-CrtJ transcript 99.2 2.8E-10 6.1E-15 130.0 15.7 114 131-248 253-368 (442)
457 cd05146 RIO3_euk RIO kinase fa 99.2 1.9E-10 4.2E-15 115.7 12.1 139 510-657 2-175 (197)
458 PRK09776 putative diguanylate 99.1 2.4E-10 5.3E-15 144.8 13.5 130 127-256 280-410 (1092)
459 TIGR02966 phoR_proteo phosphat 99.1 4.3E-10 9.3E-15 122.0 13.2 128 129-285 5-132 (333)
460 PRK11360 sensory histidine kin 99.1 8.3E-10 1.8E-14 129.8 16.2 146 130-285 262-408 (607)
461 PRK09776 putative diguanylate 99.1 1E-09 2.2E-14 139.1 16.6 131 128-258 534-668 (1092)
462 cd05154 ACAD10_11_like Acyl-Co 99.1 1.1E-09 2.4E-14 112.2 12.1 142 511-655 4-206 (223)
463 COG3642 Mn2+-dependent serine/ 99.1 2E-09 4.3E-14 105.2 12.8 133 511-655 2-140 (204)
464 PF13596 PAS_10: PAS domain; P 99.0 1.9E-09 4.2E-14 97.7 10.3 106 132-242 1-106 (106)
465 COG5002 VicK Signal transducti 99.0 4E-09 8.6E-14 110.5 13.7 132 130-284 111-242 (459)
466 PRK11359 cyclic-di-GMP phospho 99.0 3.4E-09 7.5E-14 129.9 14.6 125 129-253 135-260 (799)
467 PRK13560 hypothetical protein; 99.0 4.2E-09 9.1E-14 128.9 15.1 147 131-286 474-624 (807)
468 cd00130 PAS PAS domain; PAS mo 98.9 2.2E-08 4.9E-13 82.7 13.6 103 139-241 1-103 (103)
469 PF08447 PAS_3: PAS fold; Int 98.9 1E-08 2.3E-13 89.6 11.3 86 152-238 1-91 (91)
470 KOG3087 Serine/threonine prote 98.9 1.6E-08 3.5E-13 98.3 12.7 144 509-655 11-165 (229)
471 COG3829 RocR Transcriptional r 98.9 1.1E-08 2.3E-13 114.3 12.1 116 130-254 117-232 (560)
472 KOG3741 Poly(A) ribonuclease s 98.9 9.2E-08 2E-12 105.7 18.9 219 517-768 288-527 (655)
473 KOG2137 Protein kinase [Signal 98.9 6.1E-10 1.3E-14 126.8 1.4 144 612-756 107-262 (700)
474 PRK11086 sensory histidine kin 98.8 6.9E-08 1.5E-12 112.8 17.3 136 130-287 221-359 (542)
475 PF01163 RIO1: RIO1 family; I 98.8 3.6E-08 7.7E-13 98.9 12.0 127 520-656 1-156 (188)
476 PRK11006 phoR phosphate regulo 98.8 2.9E-08 6.3E-13 113.0 12.0 127 129-286 97-223 (430)
477 PRK15123 lipopolysaccharide co 98.8 9.2E-08 2E-12 101.4 14.3 134 517-654 34-193 (268)
478 PRK11359 cyclic-di-GMP phospho 98.8 5.2E-08 1.1E-12 119.5 13.7 126 127-254 9-138 (799)
479 PRK10820 DNA-binding transcrip 98.7 6.6E-08 1.4E-12 112.3 12.7 107 129-245 79-189 (520)
480 TIGR02040 PpsR-CrtJ transcript 98.7 1.3E-08 2.8E-13 116.4 6.2 113 136-252 2-115 (442)
481 PF12860 PAS_7: PAS fold 98.7 5.2E-08 1.1E-12 89.7 8.4 105 136-249 1-115 (115)
482 COG0478 RIO-like serine/threon 98.7 1.3E-07 2.7E-12 97.8 10.9 136 507-654 93-250 (304)
483 PF06293 Kdo: Lipopolysacchari 98.5 4.9E-07 1.1E-11 92.4 11.4 105 548-655 56-170 (206)
484 TIGR02938 nifL_nitrog nitrogen 98.5 8.6E-08 1.9E-12 109.9 5.7 153 129-286 129-295 (494)
485 KOG0576 Mitogen-activated prot 98.5 2.1E-08 4.6E-13 113.0 -0.8 238 508-768 245-487 (829)
486 COG3290 CitA Signal transducti 98.4 9.2E-07 2E-11 99.0 10.8 114 132-256 217-332 (537)
487 COG3852 NtrB Signal transducti 98.4 2.8E-06 6.1E-11 88.4 13.1 139 132-283 9-148 (363)
488 TIGR02172 Fb_sc_TIGR02172 Fibr 98.3 5.4E-06 1.2E-10 86.0 13.3 136 511-654 7-181 (226)
489 PRK09902 hypothetical protein; 98.3 4.7E-06 1E-10 84.4 11.7 138 514-655 27-179 (216)
490 KOG0501 K+-channel KCNQ [Inorg 98.3 3.2E-06 7E-11 93.4 10.8 118 129-246 13-138 (971)
491 COG0661 AarF Predicted unusual 98.3 2.4E-06 5.2E-11 98.0 9.9 151 503-658 124-317 (517)
492 PF01636 APH: Phosphotransfera 98.3 7.8E-06 1.7E-10 84.0 12.1 141 510-655 2-197 (239)
493 PF06176 WaaY: Lipopolysacchar 98.3 1.2E-05 2.6E-10 81.8 13.0 140 502-654 28-182 (229)
494 PRK15053 dpiB sensor histidine 98.2 1.7E-05 3.7E-10 93.0 16.4 114 130-256 222-337 (545)
495 PRK09959 hybrid sensory histid 98.2 1.1E-05 2.4E-10 103.7 14.4 155 130-287 576-732 (1197)
496 COG1718 RIO1 Serine/threonine 98.2 1.4E-05 3.1E-10 82.1 11.9 139 510-657 53-217 (268)
497 PF14598 PAS_11: PAS domain; P 98.2 2.7E-05 5.8E-10 71.4 12.5 95 145-239 7-104 (111)
498 COG5000 NtrY Signal transducti 98.1 1.1E-05 2.3E-10 91.0 10.4 135 130-285 370-504 (712)
499 COG2202 AtoS FOG: PAS/PAC doma 98.1 5.6E-05 1.2E-09 72.1 13.5 117 130-247 112-231 (232)
500 PRK11388 DNA-binding transcrip 98.1 2E-05 4.3E-10 94.4 12.3 107 133-247 206-312 (638)
No 1
>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]
Probab=100.00 E-value=1.4e-49 Score=415.93 Aligned_cols=260 Identities=30% Similarity=0.475 Sum_probs=230.8
Q ss_pred ccccccceeEeeeeccCCcEEEEEEEEeCC-ceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEeceeecCCc-
Q 003963 500 YEILWEDLTIGEQIGQGSCGTVYHAVWYGS-QDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQR- 577 (783)
Q Consensus 500 ~e~~~~~y~i~~~LG~G~fG~Vy~a~~~~~-~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~- 577 (783)
..+...+++.++.||+|..|+|||+.++.+ +-+|+|++ .........+++.+|+++++..+|||||.+|++|+.++.
T Consensus 74 ~~i~~~dle~~~~lG~G~gG~V~kv~Hk~t~~i~AlK~I-~~~~~~~~~~Qi~rEl~il~~~~spyIV~~ygaF~~~~~~ 152 (364)
T KOG0581|consen 74 NGISLSDLERLGVLGSGNGGTVYKVRHKPTGKIYALKVI-LLNIDPALQKQILRELEILRSCQSPYIVGFYGAFYSNGEE 152 (364)
T ss_pred cccCHHHhhhhhhcccCCCcEEEEEEEcCCCeEEEEEee-cccCCHHHHHHHHHHHHHHhhCCCCCeeeEeEEEEeCCce
Confidence 345667888899999999999999999865 55999999 445567788899999999999999999999999999995
Q ss_pred eEEEEEecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHh-CCCCEEecCCCCCCEEEcCCCcEEEEecCCCccc
Q 003963 578 LCIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHH-CNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLK 656 (783)
Q Consensus 578 ~~lV~E~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~-~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~ 656 (783)
++|+||||++|+|.+++... .++++.....++.++++||.|||+ ++ ||||||||+||||+..|.|||||||.+...
T Consensus 153 isI~mEYMDgGSLd~~~k~~-g~i~E~~L~~ia~~VL~GL~YLh~~~~--IIHRDIKPsNlLvNskGeVKicDFGVS~~l 229 (364)
T KOG0581|consen 153 ISICMEYMDGGSLDDILKRV-GRIPEPVLGKIARAVLRGLSYLHEERK--IIHRDIKPSNLLVNSKGEVKICDFGVSGIL 229 (364)
T ss_pred EEeehhhcCCCCHHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHhhccC--eeeccCCHHHeeeccCCCEEeccccccHHh
Confidence 99999999999999999864 569999999999999999999996 66 999999999999999999999999999877
Q ss_pred ccccccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCC-----ChHHHHHHhhcccccccCCCC-
Q 003963 657 HETYLTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNL-----NSMQVIGAVGFMNQRLEIPKD- 730 (783)
Q Consensus 657 ~~~~~~~~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~elltG~~Pf~~~-----~~~~~~~~i~~~~~~~~~~~~- 730 (783)
... ...+++||..|||||.+.+..|+.++||||||++|+||++|+.||... ...+++..|. ....+.+|..
T Consensus 230 vnS--~a~tfvGT~~YMsPERi~g~~Ys~~sDIWSLGLsllE~a~GrfP~~~~~~~~~~~~~Ll~~Iv-~~ppP~lP~~~ 306 (364)
T KOG0581|consen 230 VNS--IANTFVGTSAYMSPERISGESYSVKSDIWSLGLSLLELAIGRFPYPPPNPPYLDIFELLCAIV-DEPPPRLPEGE 306 (364)
T ss_pred hhh--hcccccccccccChhhhcCCcCCcccceecccHHHHHHhhCCCCCCCcCCCCCCHHHHHHHHh-cCCCCCCCccc
Confidence 666 556889999999999999999999999999999999999999999764 5566666663 3356677776
Q ss_pred CCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhcCc
Q 003963 731 VDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQASR 772 (783)
Q Consensus 731 ~s~~l~~LI~~cL~~dP~~RPsa~ell~~L~~L~~~~f~~~~ 772 (783)
+++++++||..||++||.+||++.++ ++|+|++...
T Consensus 307 fS~ef~~FV~~CL~Kdp~~R~s~~qL------l~Hpfi~~~~ 342 (364)
T KOG0581|consen 307 FSPEFRSFVSCCLRKDPSERPSAKQL------LQHPFIKKFE 342 (364)
T ss_pred CCHHHHHHHHHHhcCCcccCCCHHHH------hcCHHHhhcc
Confidence 99999999999999999999999999 7788886543
No 2
>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.3e-48 Score=429.64 Aligned_cols=254 Identities=28% Similarity=0.480 Sum_probs=236.1
Q ss_pred cceeEeeeeccCCcEEEEEEEE-eCCceEEEEEEecccC-CHHHHHHHHHHHHHHHhCCCCceeeEeceeecCCceEEEE
Q 003963 505 EDLTIGEQIGQGSCGTVYHAVW-YGSQDVAVKVFSRQEY-SDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIVT 582 (783)
Q Consensus 505 ~~y~i~~~LG~G~fG~Vy~a~~-~~~~~vAiK~i~~~~~-~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lV~ 582 (783)
.+|+.++.||+|+|+.||.+.+ ..++.||+|++.+... ...+.+.+.+||+|.+.|+|||||++|++|++.+++|||+
T Consensus 18 ~~Y~~g~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~HpnIV~f~~~FEDs~nVYivL 97 (592)
T KOG0575|consen 18 KRYKRGRFLGKGGFARCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSLKHPNIVQFYHFFEDSNNVYIVL 97 (592)
T ss_pred ceeeeeeeeccCcceEEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhcCCCcEEeeeeEeecCCceEEEE
Confidence 6799999999999999999998 5567899999988654 3456788999999999999999999999999999999999
Q ss_pred EecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCccccccccc
Q 003963 583 EFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETYLT 662 (783)
Q Consensus 583 E~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~~~ 662 (783)
|+|..++|..++++ +.++++..+..+++||+.||.|||+++ |||||||..|++++++.+|||+|||+|.........
T Consensus 98 ELC~~~sL~el~Kr-rk~ltEpEary~l~QIv~GlkYLH~~~--IiHRDLKLGNlfL~~~~~VKIgDFGLAt~le~~~Er 174 (592)
T KOG0575|consen 98 ELCHRGSLMELLKR-RKPLTEPEARYFLRQIVEGLKYLHSLG--IIHRDLKLGNLFLNENMNVKIGDFGLATQLEYDGER 174 (592)
T ss_pred EecCCccHHHHHHh-cCCCCcHHHHHHHHHHHHHHHHHHhcC--ceecccchhheeecCcCcEEecccceeeeecCcccc
Confidence 99999999999984 567999999999999999999999999 999999999999999999999999999988877778
Q ss_pred ccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhcccccccCCCCCCHHHHHHHHHh
Q 003963 663 TKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAAIVESC 742 (783)
Q Consensus 663 ~~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~l~~LI~~c 742 (783)
..+.||||.|.|||++....++..+||||+|||||-||+|++||+..+-.+.+..|. ...+.+|..++.++++||.++
T Consensus 175 k~TlCGTPNYIAPEVl~k~gHsfEvDiWSlGcvmYtLL~G~PPFetk~vkety~~Ik--~~~Y~~P~~ls~~A~dLI~~l 252 (592)
T KOG0575|consen 175 KKTLCGTPNYIAPEVLNKSGHSFEVDIWSLGCVMYTLLVGRPPFETKTVKETYNKIK--LNEYSMPSHLSAEAKDLIRKL 252 (592)
T ss_pred cceecCCCcccChhHhccCCCCCchhhhhhhhHHHhhhhCCCCcccchHHHHHHHHH--hcCcccccccCHHHHHHHHHH
Confidence 889999999999999999999999999999999999999999999988888888874 446777889999999999999
Q ss_pred hhhCCCCCCCHHHHHHHHHHHHHHHhh
Q 003963 743 WHSDPQCRPSFQELVDKLRDLQRQYFQ 769 (783)
Q Consensus 743 L~~dP~~RPsa~ell~~L~~L~~~~f~ 769 (783)
|+++|.+|||+++| |.|+||+
T Consensus 253 L~~~P~~Rpsl~~v------L~h~Ff~ 273 (592)
T KOG0575|consen 253 LRPNPSERPSLDEV------LDHPFFK 273 (592)
T ss_pred hcCCcccCCCHHHH------hcCHhhh
Confidence 99999999999999 7899994
No 3
>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]
Probab=100.00 E-value=9.4e-48 Score=402.15 Aligned_cols=259 Identities=26% Similarity=0.422 Sum_probs=230.4
Q ss_pred cccceeEeeeeccCCcEEEEEEEEeCC-ceEEEEEEecccCCH-HHHHHHHHHHHHHHhCCCCceeeEeceeecCCceEE
Q 003963 503 LWEDLTIGEQIGQGSCGTVYHAVWYGS-QDVAVKVFSRQEYSD-EVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCI 580 (783)
Q Consensus 503 ~~~~y~i~~~LG~G~fG~Vy~a~~~~~-~~vAiK~i~~~~~~~-~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~l 580 (783)
..++|+++++||+|+||+||.++.++. +-||+|++++..... ........|..||..++||+||+++..|++..++|+
T Consensus 23 ~~~dF~~lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v~hPFiv~l~ysFQt~~kLyl 102 (357)
T KOG0598|consen 23 GPDDFEILKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKIKHPFIVKLIYSFQTEEKLYL 102 (357)
T ss_pred ChhheeeeeeeeccCCceEEEEEEcccCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhCCCCcEeeeEEecccCCeEEE
Confidence 357899999999999999999998764 569999998876544 356678889999999999999999999999999999
Q ss_pred EEEecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCccccccc
Q 003963 581 VTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETY 660 (783)
Q Consensus 581 V~E~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~ 660 (783)
|+||+.||.|+.+|++.+ .+++..+..++.+|+.||.|||++| ||||||||+|||+|.+|+|+|+|||+++......
T Consensus 103 Vld~~~GGeLf~hL~~eg-~F~E~~arfYlaEi~lAL~~LH~~g--IiyRDlKPENILLd~~GHi~LtDFgL~k~~~~~~ 179 (357)
T KOG0598|consen 103 VLDYLNGGELFYHLQREG-RFSEDRARFYLAEIVLALGYLHSKG--IIYRDLKPENILLDEQGHIKLTDFGLCKEDLKDG 179 (357)
T ss_pred EEeccCCccHHHHHHhcC-CcchhHHHHHHHHHHHHHHHHHhCC--eeeccCCHHHeeecCCCcEEEeccccchhcccCC
Confidence 999999999999998754 6999999999999999999999999 9999999999999999999999999999777666
Q ss_pred ccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhcccccccCCCCCCHHHHHHHH
Q 003963 661 LTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAAIVE 740 (783)
Q Consensus 661 ~~~~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~l~~LI~ 740 (783)
....+.|||+.|||||++.+..++..+|+||||+++|||++|.+||...+..+.+..+.... ....|..++.+.++||+
T Consensus 180 ~~t~tfcGT~eYmAPEil~~~gy~~~vDWWsLGillYeML~G~pPF~~~~~~~~~~~I~~~k-~~~~p~~ls~~ardll~ 258 (357)
T KOG0598|consen 180 DATRTFCGTPEYMAPEILLGKGYDKAVDWWSLGILLYEMLTGKPPFYAEDVKKMYDKILKGK-LPLPPGYLSEEARDLLK 258 (357)
T ss_pred CccccccCCccccChHHHhcCCCCcccchHhHHHHHHHHhhCCCCCcCccHHHHHHHHhcCc-CCCCCccCCHHHHHHHH
Confidence 67778999999999999999999999999999999999999999999999988888874322 35566669999999999
Q ss_pred HhhhhCCCCCC----CHHHHHHHHHHHHHHHhhcC
Q 003963 741 SCWHSDPQCRP----SFQELVDKLRDLQRQYFQAS 771 (783)
Q Consensus 741 ~cL~~dP~~RP----sa~ell~~L~~L~~~~f~~~ 771 (783)
++|++||++|. ++.+| =.|+||..+
T Consensus 259 ~LL~rdp~~RLg~~~d~~~i------k~HpfF~~i 287 (357)
T KOG0598|consen 259 KLLKRDPRQRLGGPGDAEEI------KRHPFFKGI 287 (357)
T ss_pred HHhccCHHHhcCCCCChHHh------hcCcccccC
Confidence 99999999996 45554 357787543
No 4
>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]
Probab=100.00 E-value=6.3e-47 Score=413.73 Aligned_cols=275 Identities=49% Similarity=0.811 Sum_probs=248.2
Q ss_pred ccccccccceeEeeeeccCCcEEEEEEEEeCCceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEeceeecCC-
Q 003963 498 LDYEILWEDLTIGEQIGQGSCGTVYHAVWYGSQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQ- 576 (783)
Q Consensus 498 ~~~e~~~~~y~i~~~LG~G~fG~Vy~a~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~- 576 (783)
..+++...++.+.+.||.|+||+||++.+.+...||||++............|.+|+.+|.+++|||||+|+|++..+.
T Consensus 34 ~~~~i~~~~l~~~~~iG~G~~g~V~~~~~~g~~~vavK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~f~G~~~~~~~ 113 (362)
T KOG0192|consen 34 PEEEIDPDELPIEEVLGSGSFGTVYKGKWRGTDVVAVKIISDPDFDDESRKAFRREASLLSRLRHPNIVQFYGACTSPPG 113 (362)
T ss_pred cceecChHHhhhhhhcccCCceeEEEEEeCCceeEEEEEecchhcChHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCC
Confidence 4456667778888889999999999999998767999999888777666889999999999999999999999999887
Q ss_pred ceEEEEEecCCCCHHHHHhh-cCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCC-cEEEEecCCCc
Q 003963 577 RLCIVTEFLPRGSLFRLLQR-NTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHW-TVKVGDFGLSR 654 (783)
Q Consensus 577 ~~~lV~E~~~ggsL~~~L~~-~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~-~vkL~DFGla~ 654 (783)
.++|||||+++|+|.+++.. ....+++..++.|+.||++||.|||++++ ||||||||+||||+.++ ++||+|||+++
T Consensus 114 ~~~iVtEy~~~GsL~~~l~~~~~~~l~~~~~l~~aldiArGm~YLH~~~~-iIHrDLK~~NiLv~~~~~~~KI~DFGlsr 192 (362)
T KOG0192|consen 114 SLCIVTEYMPGGSLSVLLHKKRKRKLPLKVRLRIALDIARGMEYLHSEGP-IIHRDLKSDNILVDLKGKTLKIADFGLSR 192 (362)
T ss_pred ceEEEEEeCCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcCCC-eeecccChhhEEEcCCCCEEEECCCccce
Confidence 79999999999999999987 47789999999999999999999999875 99999999999999998 99999999998
Q ss_pred ccccccccccCCCCCCcccCccccc--CCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhcccccccCCCCCC
Q 003963 655 LKHETYLTTKTGKGTPQWMAPEVLR--NEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLEIPKDVD 732 (783)
Q Consensus 655 ~~~~~~~~~~~~~Gt~~Y~aPE~~~--~~~~s~~sDIwSLG~il~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s 732 (783)
.............||+.|||||++. ...++.|+||||||++||||+||+.||......+....+.....++.+|..++
T Consensus 193 ~~~~~~~~~~~~~GT~~wMAPEv~~~~~~~~~~K~DvySFgIvlWEl~t~~~Pf~~~~~~~~~~~v~~~~~Rp~~p~~~~ 272 (362)
T KOG0192|consen 193 EKVISKTSMTSVAGTYRWMAPEVLRGEKSPYTEKSDVYSFGIVLWELLTGEIPFEDLAPVQVASAVVVGGLRPPIPKECP 272 (362)
T ss_pred eeccccccccCCCCCccccChhhhcCCCCcCCccchhhhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcCCCCCCCccCC
Confidence 7766543333468999999999999 56899999999999999999999999999999888888887888999999999
Q ss_pred HHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhcCcC
Q 003963 733 PRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQASRS 773 (783)
Q Consensus 733 ~~l~~LI~~cL~~dP~~RPsa~ell~~L~~L~~~~f~~~~~ 773 (783)
+.+..||..||..||..||++.+++..|+.+...+-.....
T Consensus 273 ~~l~~l~~~CW~~dp~~RP~f~ei~~~l~~~~~~~~~~~~~ 313 (362)
T KOG0192|consen 273 PHLSSLMERCWLVDPSRRPSFLEIVSRLESIMSHISSAGPE 313 (362)
T ss_pred HHHHHHHHHhCCCCCCcCCCHHHHHHHHHHHHHhhcccCcc
Confidence 99999999999999999999999999999998877644333
No 5
>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=2.7e-48 Score=408.13 Aligned_cols=262 Identities=25% Similarity=0.386 Sum_probs=222.4
Q ss_pred cccceeEeeeeccCCcEEEEEEEEeC-CceEEEEEEecccCCH-----HHHHHHHHHHHHHHhCCCCceeeEeceeecCC
Q 003963 503 LWEDLTIGEQIGQGSCGTVYHAVWYG-SQDVAVKVFSRQEYSD-----EVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQ 576 (783)
Q Consensus 503 ~~~~y~i~~~LG~G~fG~Vy~a~~~~-~~~vAiK~i~~~~~~~-----~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~ 576 (783)
..+.|.+.+.||+|+||.|-+|..+. ++.||||++.+..... .......+|+++|++|+|||||+++++|+.++
T Consensus 170 ~~d~yii~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~HP~IV~~~d~f~~~d 249 (475)
T KOG0615|consen 170 FNDYYIISKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSHPNIVRIKDFFEVPD 249 (475)
T ss_pred hcceeEeeeeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcCCCCEEEEeeeeecCC
Confidence 45678999999999999999999765 5779999998765432 11223569999999999999999999999999
Q ss_pred ceEEEEEecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCC---CcEEEEecCCC
Q 003963 577 RLCIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKH---WTVKVGDFGLS 653 (783)
Q Consensus 577 ~~~lV~E~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~---~~vkL~DFGla 653 (783)
..||||||+.||+|.+.+-.++ .+.+.....+++||+.|+.|||++| |+||||||+|||+..+ ..+||+|||+|
T Consensus 250 s~YmVlE~v~GGeLfd~vv~nk-~l~ed~~K~~f~Qll~avkYLH~~G--I~HRDiKPeNILl~~~~e~~llKItDFGlA 326 (475)
T KOG0615|consen 250 SSYMVLEYVEGGELFDKVVANK-YLREDLGKLLFKQLLTAVKYLHSQG--IIHRDIKPENILLSNDAEDCLLKITDFGLA 326 (475)
T ss_pred ceEEEEEEecCccHHHHHHhcc-ccccchhHHHHHHHHHHHHHHHHcC--cccccCCcceEEeccCCcceEEEecccchh
Confidence 9999999999999999997654 4888888999999999999999999 9999999999999766 78999999999
Q ss_pred cccccccccccCCCCCCcccCcccccCCCC---CchhHHHHHHHHHHHHHcCCCCCCCCChHH-HHHHhhcccc--cccC
Q 003963 654 RLKHETYLTTKTGKGTPQWMAPEVLRNEPS---DEKSDVYSFGVILWELATEKIPWDNLNSMQ-VIGAVGFMNQ--RLEI 727 (783)
Q Consensus 654 ~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~---s~~sDIwSLG~il~elltG~~Pf~~~~~~~-~~~~i~~~~~--~~~~ 727 (783)
+..++.. ...+.||||.|.|||++.++.. ..++|||||||+||-+|+|.+||.+..... ..+.+..... .+..
T Consensus 327 K~~g~~s-fm~TlCGTpsYvAPEVl~~kg~~~~~~kVDiWSlGcvLfvcLsG~pPFS~~~~~~sl~eQI~~G~y~f~p~~ 405 (475)
T KOG0615|consen 327 KVSGEGS-FMKTLCGTPSYVAPEVLASKGVEYYPSKVDIWSLGCVLFVCLSGYPPFSEEYTDPSLKEQILKGRYAFGPLQ 405 (475)
T ss_pred hccccce-ehhhhcCCccccChhheecCCeecccchheeeeccceEEEEeccCCCcccccCCccHHHHHhcCcccccChh
Confidence 9887543 4458899999999999987654 347899999999999999999997665544 5555533332 2344
Q ss_pred CCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhcCcCC
Q 003963 728 PKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQASRST 774 (783)
Q Consensus 728 ~~~~s~~l~~LI~~cL~~dP~~RPsa~ell~~L~~L~~~~f~~~~~~ 774 (783)
+..++.+..+||.+||..||++|||+.++ |+|+||+...+.
T Consensus 406 w~~Iseea~dlI~~mL~VdP~~R~s~~ea------L~hpW~~~~~~~ 446 (475)
T KOG0615|consen 406 WDRISEEALDLINWMLVVDPENRPSADEA------LNHPWFKDAPCL 446 (475)
T ss_pred hhhhhHHHHHHHHHhhEeCcccCcCHHHH------hcChhhhccccc
Confidence 56789999999999999999999999999 789999977644
No 6
>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=100.00 E-value=1.5e-46 Score=396.01 Aligned_cols=259 Identities=26% Similarity=0.483 Sum_probs=229.6
Q ss_pred ccceeEeeeeccCCcEEEEEEEEeC-CceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEeceeecCCceEEEE
Q 003963 504 WEDLTIGEQIGQGSCGTVYHAVWYG-SQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIVT 582 (783)
Q Consensus 504 ~~~y~i~~~LG~G~fG~Vy~a~~~~-~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lV~ 582 (783)
..+|.+.+.||.|+|++||+|+++. +..||||.+.+.....+..+-+..|+.+|+.|+|||||.+++++..++.+|+||
T Consensus 9 ~~~y~~~~~iG~GsfavVykg~h~~~~~~VAIK~i~~~~l~~k~~e~L~~Ei~iLkel~H~nIV~l~d~~~~~~~i~lVM 88 (429)
T KOG0595|consen 9 VGDYELSREIGSGSFAVVYKGRHKKSGTEVAIKCIAKKKLNKKLVELLLSEIKILKELKHPNIVRLLDCIEDDDFIYLVM 88 (429)
T ss_pred cccceehhhccCcceEEEEEeEeccCCceEEeeeehhhccCHHHHHHHHHHHHHHHhcCCcceeeEEEEEecCCeEEEEE
Confidence 4689999999999999999999865 478999999998888888888999999999999999999999999999999999
Q ss_pred EecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCC------CcEEEEecCCCccc
Q 003963 583 EFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKH------WTVKVGDFGLSRLK 656 (783)
Q Consensus 583 E~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~------~~vkL~DFGla~~~ 656 (783)
|||.||+|.+++++.+ .+++..+..++.||+.||++||+++ ||||||||.||||+.. -.+||+|||+|+..
T Consensus 89 EyC~gGDLs~yi~~~~-~l~e~t~r~Fm~QLA~alq~L~~~~--IiHRDLKPQNiLLs~~~~~~~~~~LKIADFGfAR~L 165 (429)
T KOG0595|consen 89 EYCNGGDLSDYIRRRG-RLPEATARHFMQQLASALQFLHENN--IIHRDLKPQNILLSTTARNDTSPVLKIADFGFARFL 165 (429)
T ss_pred EeCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCC--eeeccCCcceEEeccCCCCCCCceEEecccchhhhC
Confidence 9999999999998754 6999999999999999999999999 9999999999999764 46899999999988
Q ss_pred ccccccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhcccccc-cCCCCCCHHH
Q 003963 657 HETYLTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRL-EIPKDVDPRW 735 (783)
Q Consensus 657 ~~~~~~~~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~elltG~~Pf~~~~~~~~~~~i~~~~~~~-~~~~~~s~~l 735 (783)
... ....+.||+|.|||||+++..+|+.|+|+||+|++||+|++|++||...+..+++..+....... .++..++..+
T Consensus 166 ~~~-~~a~tlcGSplYMAPEV~~~~~YdAKADLWSiG~Ilyq~l~g~~Pf~a~t~~eL~~~~~k~~~~~~~~~~~~s~~~ 244 (429)
T KOG0595|consen 166 QPG-SMAETLCGSPLYMAPEVIMSQQYDAKADLWSIGTILYQCLTGKPPFDAETPKELLLYIKKGNEIVPVLPAELSNPL 244 (429)
T ss_pred Cch-hHHHHhhCCccccCHHHHHhccccchhhHHHHHHHHHHHHhCCCCccccCHHHHHHHHhccccccCchhhhccCch
Confidence 754 35568899999999999999999999999999999999999999999999999888776555433 3455677788
Q ss_pred HHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhcCc
Q 003963 736 AAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQASR 772 (783)
Q Consensus 736 ~~LI~~cL~~dP~~RPsa~ell~~L~~L~~~~f~~~~ 772 (783)
.+|+...|++++..|-++.+. +.+++.....
T Consensus 245 ~~Ll~~ll~~~~~~~~~~~~~------~~~~~l~~~p 275 (429)
T KOG0595|consen 245 RELLISLLQRNPKDRISFEDF------FDHPFLAANP 275 (429)
T ss_pred hhhhhHHHhcCccccCchHHh------hhhhhcccCc
Confidence 899999999999999887776 4556554444
No 7
>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=3.4e-47 Score=382.02 Aligned_cols=258 Identities=25% Similarity=0.409 Sum_probs=225.9
Q ss_pred ccccceeEeeeeccCCcEEEEEEEEeC-CceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEece-eecCC-ce
Q 003963 502 ILWEDLTIGEQIGQGSCGTVYHAVWYG-SQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGA-VTSPQ-RL 578 (783)
Q Consensus 502 ~~~~~y~i~~~LG~G~fG~Vy~a~~~~-~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~-~~~~~-~~ 578 (783)
....+|+|.++||+|.||.||++.+.. +..+|.|.+.-...+....+....|+.+|++|+|||||++|++ |..+. .+
T Consensus 16 ~~l~~y~Il~~IG~GsFg~vykv~~~~~g~l~a~K~i~f~~md~k~rq~~v~Ei~lLkQL~HpNIVqYy~~~f~~~~evl 95 (375)
T KOG0591|consen 16 KTLADYQILKKIGRGSFGEVYKVQCLLDGKLVALKKIQFGMMDAKARQDCVKEISLLKQLNHPNIVQYYAHSFIEDNEVL 95 (375)
T ss_pred ccHHHHHHHHHHcCCcchheEEeeeccCcchhhhhhcchhhccHHHHHHHHHHHHHHHhcCCchHHHHHHHhhhccchhh
Confidence 345689999999999999999999754 5679999998777777888899999999999999999999983 44444 48
Q ss_pred EEEEEecCCCCHHHHHhh---cCCcchHHHHHHHHHHHHHHHHHHHhCCCC--EEecCCCCCCEEEcCCCcEEEEecCCC
Q 003963 579 CIVTEFLPRGSLFRLLQR---NTTKLDWRRRILMALDIARGVSYLHHCNPP--IIHRDLKSSNLLVDKHWTVKVGDFGLS 653 (783)
Q Consensus 579 ~lV~E~~~ggsL~~~L~~---~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~--IvHrDIKp~NILl~~~~~vkL~DFGla 653 (783)
+||||||.+|+|..+++. .+..++++.+|+++.|++.||..+|..-++ |+||||||.||+|+.+|.|||+|||++
T Consensus 96 nivmE~c~~GDLsqmIk~~K~qkr~ipE~~Vwk~f~QL~~AL~~cH~~~~r~~VmHRDIKPaNIFl~~~gvvKLGDfGL~ 175 (375)
T KOG0591|consen 96 NIVMELCDAGDLSQMIKHFKKQKRLIPEKTVWKYFVQLCRALYHCHSKIPRGTVMHRDIKPANIFLTANGVVKLGDFGLG 175 (375)
T ss_pred HHHHHhhcccCHHHHHHHHHhccccCchHHHHHHHHHHHHHHHHHhccccccceeeccCcchheEEcCCCceeeccchhH
Confidence 999999999999999863 456799999999999999999999994444 999999999999999999999999999
Q ss_pred cccccccccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhcccccccCC-CCCC
Q 003963 654 RLKHETYLTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLEIP-KDVD 732 (783)
Q Consensus 654 ~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~~-~~~s 732 (783)
+.+........+.+|||.||+||++.+.+|+.++|||||||++|||+.-.+||.+.+-..+...|... ..+++| ..+|
T Consensus 176 r~l~s~~tfA~S~VGTPyYMSPE~i~~~~Y~~kSDiWslGCllyEMcaL~~PF~g~n~~~L~~KI~qg-d~~~~p~~~YS 254 (375)
T KOG0591|consen 176 RFLSSKTTFAHSLVGTPYYMSPERIHESGYNFKSDIWSLGCLLYEMCALQSPFYGDNLLSLCKKIEQG-DYPPLPDEHYS 254 (375)
T ss_pred hHhcchhHHHHhhcCCCcccCHHHHhcCCCCcchhHHHHHHHHHHHHhcCCCcccccHHHHHHHHHcC-CCCCCcHHHhh
Confidence 98887766677889999999999999999999999999999999999999999999888888787544 344466 6789
Q ss_pred HHHHHHHHHhhhhCCCCCCCHHHHHHHH
Q 003963 733 PRWAAIVESCWHSDPQCRPSFQELVDKL 760 (783)
Q Consensus 733 ~~l~~LI~~cL~~dP~~RPsa~ell~~L 760 (783)
.++..||..|+..||+.||+...++..+
T Consensus 255 ~~l~~li~~ci~vd~~~RP~t~~~v~di 282 (375)
T KOG0591|consen 255 TDLRELINMCIAVDPEQRPDTVPYVQDI 282 (375)
T ss_pred hHHHHHHHHHccCCcccCCCcchHHHHH
Confidence 9999999999999999999865554443
No 8
>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]
Probab=100.00 E-value=2.2e-45 Score=397.73 Aligned_cols=257 Identities=25% Similarity=0.449 Sum_probs=229.2
Q ss_pred cccceeEeeeeccCCcEEEEEEEEeC-CceEEEEEEecccCCH-HHHHHHHHHHHHHHhC-CCCceeeEeceeecCCceE
Q 003963 503 LWEDLTIGEQIGQGSCGTVYHAVWYG-SQDVAVKVFSRQEYSD-EVIHSFRQEVSLMKRL-RHPNVLLFMGAVTSPQRLC 579 (783)
Q Consensus 503 ~~~~y~i~~~LG~G~fG~Vy~a~~~~-~~~vAiK~i~~~~~~~-~~~~~~~~Ei~il~~l-~HpnIv~l~~~~~~~~~~~ 579 (783)
...+|.+++.||+|+|++||+|+.+. +++|||||+.+..+.. .-.+-+.+|-.+|.+| .||.||+||..|++...+|
T Consensus 71 ~~~DF~Fg~~lGeGSYStV~~A~~~~t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~~hPgivkLy~TFQD~~sLY 150 (604)
T KOG0592|consen 71 TPNDFKFGKILGEGSYSTVVLAREKATGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLSGHPGIVKLYFTFQDEESLY 150 (604)
T ss_pred ChhhcchhheeccccceeEEEeeecCCCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhhCCCCeEEEEEEeecccceE
Confidence 45799999999999999999999865 5789999998765433 2345567899999999 7999999999999999999
Q ss_pred EEEEecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCcccccc
Q 003963 580 IVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHET 659 (783)
Q Consensus 580 lV~E~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~~~ 659 (783)
+|+||+++|+|.++|.+. ..+++.-+..++.||+.||+|||++| ||||||||+||||+.++++||+|||.|+.+...
T Consensus 151 FvLe~A~nGdll~~i~K~-Gsfde~caR~YAAeIldAleylH~~G--IIHRDlKPENILLd~dmhikITDFGsAK~l~~~ 227 (604)
T KOG0592|consen 151 FVLEYAPNGDLLDLIKKY-GSFDETCARFYAAEILDALEYLHSNG--IIHRDLKPENILLDKDGHIKITDFGSAKILSPS 227 (604)
T ss_pred EEEEecCCCcHHHHHHHh-CcchHHHHHHHHHHHHHHHHHHHhcC--ceeccCChhheeEcCCCcEEEeeccccccCChh
Confidence 999999999999999875 46999999999999999999999999 999999999999999999999999999876543
Q ss_pred ccc-----------c--cCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccccccc
Q 003963 660 YLT-----------T--KTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLE 726 (783)
Q Consensus 660 ~~~-----------~--~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~elltG~~Pf~~~~~~~~~~~i~~~~~~~~ 726 (783)
... . .+++||..|.+||++.....++.+|||+||||||+|+.|.+||...+....+..|. ...+.
T Consensus 228 ~~~~~~~~~~~~a~s~~~SFVGTAeYVSPElL~~~~~~~~sDiWAlGCilyQmlaG~PPFra~NeyliFqkI~--~l~y~ 305 (604)
T KOG0592|consen 228 QKSQENPVDPNQASSRRSSFVGTAEYVSPELLNDSPAGPSSDLWALGCILYQMLAGQPPFRAANEYLIFQKIQ--ALDYE 305 (604)
T ss_pred hccccCccCcccccCcccceeeeecccCHHHhcCCCCCcccchHHHHHHHHHHhcCCCCCccccHHHHHHHHH--Hhccc
Confidence 211 1 45789999999999999999999999999999999999999999999988888874 45678
Q ss_pred CCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhc
Q 003963 727 IPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQA 770 (783)
Q Consensus 727 ~~~~~s~~l~~LI~~cL~~dP~~RPsa~ell~~L~~L~~~~f~~ 770 (783)
+|+.+++.+.+||+++|..||.+|++..+| -+|+||..
T Consensus 306 fp~~fp~~a~dLv~KLLv~dp~~Rlt~~qI------k~HpFF~~ 343 (604)
T KOG0592|consen 306 FPEGFPEDARDLIKKLLVRDPSDRLTSQQI------KAHPFFEG 343 (604)
T ss_pred CCCCCCHHHHHHHHHHHccCccccccHHHH------hhCccccc
Confidence 899999999999999999999999999999 57899843
No 9
>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]
Probab=100.00 E-value=8.3e-46 Score=375.00 Aligned_cols=254 Identities=24% Similarity=0.436 Sum_probs=230.4
Q ss_pred ccccceeEeeeeccCCcEEEEEEEEeCC-ceEEEEEEecccCC-HHHHHHHHHHHHHHHhCCCCceeeEeceeecCCceE
Q 003963 502 ILWEDLTIGEQIGQGSCGTVYHAVWYGS-QDVAVKVFSRQEYS-DEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLC 579 (783)
Q Consensus 502 ~~~~~y~i~~~LG~G~fG~Vy~a~~~~~-~~vAiK~i~~~~~~-~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~ 579 (783)
...++|++++.||.|+||+|.+++.+.+ .-||+|++.+...- ..+.+...+|..+|+.+.||+++++++.|.+.+.+|
T Consensus 41 ~~l~dfe~~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v~~PFlv~l~~t~~d~~~ly 120 (355)
T KOG0616|consen 41 YSLQDFERLKTLGTGSFGRVHLVREKHSGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAVSHPFLVKLYGTFKDNSNLY 120 (355)
T ss_pred cchhhhhheeeeccCccceEEEEEEccCCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhccCceeEEEEEeeccCCeEE
Confidence 4457899999999999999999998765 45999999887654 367778889999999999999999999999999999
Q ss_pred EEEEecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCcccccc
Q 003963 580 IVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHET 659 (783)
Q Consensus 580 lV~E~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~~~ 659 (783)
|||||++||.|+.+|++. .+++++.+..++.||+.||+|||+++ |++|||||+|||+|.+|++||+|||+|+.....
T Consensus 121 mvmeyv~GGElFS~Lrk~-~rF~e~~arFYAAeivlAleylH~~~--iiYRDLKPENiLlD~~G~iKitDFGFAK~v~~r 197 (355)
T KOG0616|consen 121 MVMEYVPGGELFSYLRKS-GRFSEPHARFYAAEIVLALEYLHSLD--IIYRDLKPENLLLDQNGHIKITDFGFAKRVSGR 197 (355)
T ss_pred EEEeccCCccHHHHHHhc-CCCCchhHHHHHHHHHHHHHHHHhcC--eeeccCChHHeeeccCCcEEEEeccceEEecCc
Confidence 999999999999999874 46999999999999999999999999 999999999999999999999999999876543
Q ss_pred cccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhcccccccCCCCCCHHHHHHH
Q 003963 660 YLTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAAIV 739 (783)
Q Consensus 660 ~~~~~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~l~~LI 739 (783)
+.+.||||.|+|||++..+.++.++|+|+||+++|||+.|.+||...++.+.+..| +.....+|..+++++++||
T Consensus 198 ---T~TlCGTPeYLAPEii~sk~ynkavDWWalGVLIYEMlaG~pPF~~~~~~~iY~KI--~~~~v~fP~~fs~~~kdLl 272 (355)
T KOG0616|consen 198 ---TWTLCGTPEYLAPEIIQSKGYNKAVDWWALGVLIYEMLAGYPPFYDDNPIQIYEKI--LEGKVKFPSYFSSDAKDLL 272 (355)
T ss_pred ---EEEecCCccccChHHhhcCCCCcchhHHHHHHHHHHHHcCCCCCcCCChHHHHHHH--HhCcccCCcccCHHHHHHH
Confidence 56889999999999999999999999999999999999999999999999998888 5677889999999999999
Q ss_pred HHhhhhCCCCC-----CCHHHHHHHHHHHHHHHhh
Q 003963 740 ESCWHSDPQCR-----PSFQELVDKLRDLQRQYFQ 769 (783)
Q Consensus 740 ~~cL~~dP~~R-----Psa~ell~~L~~L~~~~f~ 769 (783)
+++|+.|-.+| ....+| -.|+||+
T Consensus 273 ~~LL~vD~t~R~gnlknG~~dI------k~H~wF~ 301 (355)
T KOG0616|consen 273 KKLLQVDLTKRFGNLKNGVEDI------KNHPWFK 301 (355)
T ss_pred HHHHhhhhHhhhcCcCCCcccc------ccCcccc
Confidence 99999999999 344555 4577774
No 10
>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]
Probab=100.00 E-value=6.7e-46 Score=376.07 Aligned_cols=256 Identities=23% Similarity=0.362 Sum_probs=222.9
Q ss_pred cceeEeeeeccCCcEEEEEEEEeCC-ceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEeceeecCCceEEEEE
Q 003963 505 EDLTIGEQIGQGSCGTVYHAVWYGS-QDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIVTE 583 (783)
Q Consensus 505 ~~y~i~~~LG~G~fG~Vy~a~~~~~-~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lV~E 583 (783)
+.|+.+.++|+|+||+||+++++.+ +-||||+|....-++...+-..+|+++|++|+|+|+|.++++|.....+++|+|
T Consensus 2 ekYE~LgkvGEGSYGvV~KCrnk~TgqIVAIKkF~Esedd~~VkKIAlREIrmLKqLkH~NLVnLiEVFrrkrklhLVFE 81 (396)
T KOG0593|consen 2 EKYEKLGKVGEGSYGVVMKCRNKDTGQIVAIKKFVESEDDPVVKKIALREIRMLKQLKHENLVNLIEVFRRKRKLHLVFE 81 (396)
T ss_pred cHHhhhhccccCcceEEEEeccCCcccEEEEEeeccCCccHHHHHHHHHHHHHHHhcccchHHHHHHHHHhcceeEEEee
Confidence 5688899999999999999998764 669999998777667777888999999999999999999999999999999999
Q ss_pred ecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCcccccccccc
Q 003963 584 FLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETYLTT 663 (783)
Q Consensus 584 ~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~~~~ 663 (783)
||+. ++.+-|++....++.+.+..+++|++.|+.|+|+++ +|||||||+||||+.+|.+||||||+|+....+....
T Consensus 82 ~~dh-TvL~eLe~~p~G~~~~~vk~~l~Q~l~ai~~cHk~n--~IHRDIKPENILit~~gvvKLCDFGFAR~L~~pgd~Y 158 (396)
T KOG0593|consen 82 YCDH-TVLHELERYPNGVPSELVKKYLYQLLKAIHFCHKNN--CIHRDIKPENILITQNGVVKLCDFGFARTLSAPGDNY 158 (396)
T ss_pred ecch-HHHHHHHhccCCCCHHHHHHHHHHHHHHhhhhhhcC--eecccCChhheEEecCCcEEeccchhhHhhcCCcchh
Confidence 9976 777778887888999999999999999999999999 9999999999999999999999999999887655555
Q ss_pred cCCCCCCcccCcccccC-CCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccccc------------------
Q 003963 664 KTGKGTPQWMAPEVLRN-EPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQR------------------ 724 (783)
Q Consensus 664 ~~~~Gt~~Y~aPE~~~~-~~~s~~sDIwSLG~il~elltG~~Pf~~~~~~~~~~~i~~~~~~------------------ 724 (783)
...+.|..|+|||.+.| .+|+..+|||++||++.||++|.+-|.+.+..+.+..|....+.
T Consensus 159 TDYVATRWYRaPELLvGDtqYG~pVDiWAiGCv~aEl~~G~pL~PG~SDiDQLy~I~ktLG~L~prhq~iF~~N~~F~Gv 238 (396)
T KOG0593|consen 159 TDYVATRWYRAPELLVGDTQYGKPVDIWAIGCVFAELLTGEPLWPGRSDIDQLYLIRKTLGNLIPRHQSIFSSNPFFHGV 238 (396)
T ss_pred hhhhhhhhccChhhhcccCcCCCcccchhhhHHHHHHhcCCcCCCCcchHHHHHHHHHHHcccCHHHHHHhccCCceeee
Confidence 56778999999999998 77999999999999999999999999998887766554322111
Q ss_pred -ccCC----------CCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhh
Q 003963 725 -LEIP----------KDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQ 769 (783)
Q Consensus 725 -~~~~----------~~~s~~l~~LI~~cL~~dP~~RPsa~ell~~L~~L~~~~f~ 769 (783)
++.+ +.++.-+.+|+++||+.||.+|++-.++ |.|+||+
T Consensus 239 ~lP~~~~~epLe~k~p~~s~~~ld~~k~cL~~dP~~R~sc~ql------l~H~yFd 288 (396)
T KOG0593|consen 239 RLPEPEHPEPLERKYPKISNVLLDLLKKCLKMDPDDRLSCEQL------LHHPYFD 288 (396)
T ss_pred ecCCCCCccchhhhcccchHHHHHHHHHHhcCCccccccHHHH------hcChHHH
Confidence 1111 2345678999999999999999999999 6778884
No 11
>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.9e-44 Score=394.12 Aligned_cols=258 Identities=30% Similarity=0.523 Sum_probs=230.3
Q ss_pred ccccceeEeeeeccCCcEEEEEEEEeC-CceEEEEEEecccCC---HHHHHHHHHHHHHHHhCC-CCceeeEeceeecCC
Q 003963 502 ILWEDLTIGEQIGQGSCGTVYHAVWYG-SQDVAVKVFSRQEYS---DEVIHSFRQEVSLMKRLR-HPNVLLFMGAVTSPQ 576 (783)
Q Consensus 502 ~~~~~y~i~~~LG~G~fG~Vy~a~~~~-~~~vAiK~i~~~~~~---~~~~~~~~~Ei~il~~l~-HpnIv~l~~~~~~~~ 576 (783)
...+.|.+++.||+|+||+|++|.+.. +..||+|++.+.... ....+.+.+|+.+++.++ ||||+++++++....
T Consensus 14 ~~~g~y~~~~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~ev~~t~~ 93 (370)
T KOG0583|consen 14 LSIGKYELGRTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLLEVFATPT 93 (370)
T ss_pred cccCceeeeeeecCCCCeeEEEeeeccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEEEEEecCC
Confidence 456799999999999999999998754 578999987765222 234556778999999999 999999999999999
Q ss_pred ceEEEEEecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCC-CcEEEEecCCCcc
Q 003963 577 RLCIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKH-WTVKVGDFGLSRL 655 (783)
Q Consensus 577 ~~~lV~E~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~-~~vkL~DFGla~~ 655 (783)
.+|+|||||.||+|++++.. ..++.+..+..+++||+.|++|||++| |+||||||+|||++.+ +++||+|||++..
T Consensus 94 ~~~ivmEy~~gGdL~~~i~~-~g~l~E~~ar~~F~Qlisav~y~H~~g--i~HRDLK~ENilld~~~~~~Kl~DFG~s~~ 170 (370)
T KOG0583|consen 94 KIYIVMEYCSGGDLFDYIVN-KGRLKEDEARKYFRQLISAVAYCHSRG--IVHRDLKPENILLDGNEGNLKLSDFGLSAI 170 (370)
T ss_pred eEEEEEEecCCccHHHHHHH-cCCCChHHHHHHHHHHHHHHHHHHhCC--EeeCCCCHHHEEecCCCCCEEEeccccccc
Confidence 99999999999999999988 667999999999999999999999999 9999999999999999 9999999999987
Q ss_pred cccccccccCCCCCCcccCcccccCCC-C-CchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhcccccccCCCCC-C
Q 003963 656 KHETYLTTKTGKGTPQWMAPEVLRNEP-S-DEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLEIPKDV-D 732 (783)
Q Consensus 656 ~~~~~~~~~~~~Gt~~Y~aPE~~~~~~-~-s~~sDIwSLG~il~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~-s 732 (783)
.........+.+||+.|+|||++.+.. | +.++||||+|++||.|++|..||.+.+...++..+ ......+|..+ +
T Consensus 171 ~~~~~~~l~t~cGsp~Y~aPEvl~~~~~Y~g~~aDvWS~GViLy~ml~G~~PF~d~~~~~l~~ki--~~~~~~~p~~~~S 248 (370)
T KOG0583|consen 171 SPGEDGLLKTFCGSPAYAAPEVLSGKGTYSGKAADVWSLGVILYVLLCGRLPFDDSNVPNLYRKI--RKGEFKIPSYLLS 248 (370)
T ss_pred cCCCCCcccCCCCCcccCCHHHhCCCCCcCCchhhhhhhHHHHHHHHhCCCCCCCccHHHHHHHH--hcCCccCCCCcCC
Confidence 743334566889999999999999977 7 58899999999999999999999998888877775 55677888888 9
Q ss_pred HHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhc
Q 003963 733 PRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQA 770 (783)
Q Consensus 733 ~~l~~LI~~cL~~dP~~RPsa~ell~~L~~L~~~~f~~ 770 (783)
++++.||.+||..||.+|+++.++ +.|+||+.
T Consensus 249 ~~~~~Li~~mL~~~P~~R~t~~~i------~~h~w~~~ 280 (370)
T KOG0583|consen 249 PEARSLIEKMLVPDPSTRITLLEI------LEHPWFQK 280 (370)
T ss_pred HHHHHHHHHHcCCCcccCCCHHHH------hhChhhcc
Confidence 999999999999999999999999 67999987
No 12
>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.8e-44 Score=383.49 Aligned_cols=258 Identities=31% Similarity=0.547 Sum_probs=220.2
Q ss_pred cceeEeeeeccCCcEEEEEEEEeC-CceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEeceeecCC--ceEEE
Q 003963 505 EDLTIGEQIGQGSCGTVYHAVWYG-SQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQ--RLCIV 581 (783)
Q Consensus 505 ~~y~i~~~LG~G~fG~Vy~a~~~~-~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~--~~~lV 581 (783)
.+|..++.||+|+||.||++.+.. +..+|||.+....... .+.+.+|+.+|.+|+|||||+++|...... .+++.
T Consensus 17 ~~~~~~~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~~~~~--~~~l~~Ei~iL~~l~~p~IV~~~G~~~~~~~~~~~i~ 94 (313)
T KOG0198|consen 17 SNWSKGKLLGRGSFGSVYLATNKKTGELMAVKSVELEDSPT--SESLEREIRILSRLNHPNIVQYYGSSSSRENDEYNIF 94 (313)
T ss_pred chhhhhccccCccceEEEEEEecCCCcceeeeeeecccchh--HHHHHHHHHHHHhCCCCCEEeeCCccccccCeeeEee
Confidence 457788999999999999999876 5679999987763222 677899999999999999999999754444 69999
Q ss_pred EEecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcC-CCcEEEEecCCCccccc--
Q 003963 582 TEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDK-HWTVKVGDFGLSRLKHE-- 658 (783)
Q Consensus 582 ~E~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~-~~~vkL~DFGla~~~~~-- 658 (783)
|||+++|+|.+++.+.+.++++..+..+.+||++||.|||++| ||||||||+||||+. ++.+||+|||+++....
T Consensus 95 mEy~~~GsL~~~~~~~g~~l~E~~v~~ytr~iL~GL~ylHs~g--~vH~DiK~~NiLl~~~~~~~KlaDFG~a~~~~~~~ 172 (313)
T KOG0198|consen 95 MEYAPGGSLSDLIKRYGGKLPEPLVRRYTRQILEGLAYLHSKG--IVHCDIKPANILLDPSNGDVKLADFGLAKKLESKG 172 (313)
T ss_pred eeccCCCcHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCC--EeccCcccceEEEeCCCCeEEeccCcccccccccc
Confidence 9999999999999987667999999999999999999999998 999999999999999 79999999999886653
Q ss_pred -ccccccCCCCCCcccCcccccC-CCCCchhHHHHHHHHHHHHHcCCCCCCC-CChHHHHHHhhcccccccCCCCCCHHH
Q 003963 659 -TYLTTKTGKGTPQWMAPEVLRN-EPSDEKSDVYSFGVILWELATEKIPWDN-LNSMQVIGAVGFMNQRLEIPKDVDPRW 735 (783)
Q Consensus 659 -~~~~~~~~~Gt~~Y~aPE~~~~-~~~s~~sDIwSLG~il~elltG~~Pf~~-~~~~~~~~~i~~~~~~~~~~~~~s~~l 735 (783)
.........||+.|||||++.+ .....++|||||||++.||+||+.||.. ......+..+......+.+|..+++++
T Consensus 173 ~~~~~~~~~~Gtp~~maPEvi~~g~~~~~~sDiWSlGCtVvEM~Tg~~PW~~~~~~~~~~~~ig~~~~~P~ip~~ls~~a 252 (313)
T KOG0198|consen 173 TKSDSELSVQGTPNYMAPEVIRNGEVARRESDIWSLGCTVVEMLTGKPPWSEFFEEAEALLLIGREDSLPEIPDSLSDEA 252 (313)
T ss_pred ccccccccccCCccccCchhhcCCCcCCccchhhhcCCEEEeccCCCCcchhhcchHHHHHHHhccCCCCCCCcccCHHH
Confidence 1223345689999999999985 3345699999999999999999999988 455555555555555678999999999
Q ss_pred HHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhcCc
Q 003963 736 AAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQASR 772 (783)
Q Consensus 736 ~~LI~~cL~~dP~~RPsa~ell~~L~~L~~~~f~~~~ 772 (783)
++||.+|+.++|.+|||+.++ |.|+|.+...
T Consensus 253 ~~Fl~~C~~~~p~~Rpta~eL------L~hpf~~~~~ 283 (313)
T KOG0198|consen 253 KDFLRKCFKRDPEKRPTAEEL------LEHPFLKQNS 283 (313)
T ss_pred HHHHHHHhhcCcccCcCHHHH------hhChhhhccc
Confidence 999999999999999999999 6777775543
No 13
>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.3e-44 Score=398.70 Aligned_cols=258 Identities=33% Similarity=0.520 Sum_probs=234.6
Q ss_pred cceeEeeeeccCCcEEEEEEEEe-CCceEEEEEEecc-cCCHHHHHHHHHHHHHHHhCCCCceeeEeceeecCCceEEEE
Q 003963 505 EDLTIGEQIGQGSCGTVYHAVWY-GSQDVAVKVFSRQ-EYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIVT 582 (783)
Q Consensus 505 ~~y~i~~~LG~G~fG~Vy~a~~~-~~~~vAiK~i~~~-~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lV~ 582 (783)
+-|++++.||.|+.|.|-+|++. .++.+|||++.+. .........+.+|+.||+.|.||||+++|++|+...++|+|+
T Consensus 12 GpwkLgkTLG~Gstg~vrlakh~~TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi~HpnVl~LydVwe~~~~lylvl 91 (786)
T KOG0588|consen 12 GPWKLGKTLGKGSTGCVRLAKHAETGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLIEHPNVLRLYDVWENKQHLYLVL 91 (786)
T ss_pred cceeccccccCCCCceehhhhcccccceeEEEeeccccccccccccchhhhhHHHHHhcCCCeeeeeeeeccCceEEEEE
Confidence 56899999999999999999975 4678999999887 555666778999999999999999999999999999999999
Q ss_pred EecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCccccccccc
Q 003963 583 EFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETYLT 662 (783)
Q Consensus 583 E~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~~~ 662 (783)
||++||.|+++|-+. .++++..++++++||+.|+.|||..+ |+|||+||+|+|++..+.+||+|||+|.+.... ..
T Consensus 92 Eyv~gGELFdylv~k-G~l~e~eaa~ff~QIi~gv~yCH~~~--icHRDLKpENlLLd~~~nIKIADFGMAsLe~~g-kl 167 (786)
T KOG0588|consen 92 EYVPGGELFDYLVRK-GPLPEREAAHFFRQILDGVSYCHAFN--ICHRDLKPENLLLDVKNNIKIADFGMASLEVPG-KL 167 (786)
T ss_pred EecCCchhHHHHHhh-CCCCCHHHHHHHHHHHHHHHHHhhhc--ceeccCCchhhhhhcccCEeeeccceeecccCC-cc
Confidence 999999999999774 46999999999999999999999998 999999999999999999999999999865543 34
Q ss_pred ccCCCCCCcccCcccccCCCC-CchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhcccccccCCCCCCHHHHHHHHH
Q 003963 663 TKTGKGTPQWMAPEVLRNEPS-DEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAAIVES 741 (783)
Q Consensus 663 ~~~~~Gt~~Y~aPE~~~~~~~-s~~sDIwSLG~il~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~l~~LI~~ 741 (783)
..+.||+|.|.|||++.|.+| +.++||||+|||||.||||++||.+.+...++..+ ..+.+.+|.++++++++||.+
T Consensus 168 LeTSCGSPHYA~PEIV~G~pYdG~~sDVWSCGVILfALLtG~LPFdDdNir~LLlKV--~~G~f~MPs~Is~eaQdLLr~ 245 (786)
T KOG0588|consen 168 LETSCGSPHYAAPEIVSGRPYDGRPSDVWSCGVILFALLTGKLPFDDDNIRVLLLKV--QRGVFEMPSNISSEAQDLLRR 245 (786)
T ss_pred ccccCCCcccCCchhhcCCCCCCCccccchhHHHHHHHHhCCCCCCCccHHHHHHHH--HcCcccCCCcCCHHHHHHHHH
Confidence 568899999999999999998 68999999999999999999999999988888777 456788999999999999999
Q ss_pred hhhhCCCCCCCHHHHHHHHHHHHHHHhhcCcCC
Q 003963 742 CWHSDPQCRPSFQELVDKLRDLQRQYFQASRST 774 (783)
Q Consensus 742 cL~~dP~~RPsa~ell~~L~~L~~~~f~~~~~~ 774 (783)
||..||.+|.|..+| +.|+|+++..+.
T Consensus 246 ml~VDp~~RiT~~eI------~kHP~l~g~~~~ 272 (786)
T KOG0588|consen 246 MLDVDPSTRITTEEI------LKHPFLSGYTSL 272 (786)
T ss_pred HhccCccccccHHHH------hhCchhhcCCCC
Confidence 999999999999999 788998776554
No 14
>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]
Probab=100.00 E-value=7.4e-45 Score=392.83 Aligned_cols=254 Identities=30% Similarity=0.545 Sum_probs=232.1
Q ss_pred cceeEeeeeccCCcEEEEEEEEeCC-ceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEeceeecCCceEEEEE
Q 003963 505 EDLTIGEQIGQGSCGTVYHAVWYGS-QDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIVTE 583 (783)
Q Consensus 505 ~~y~i~~~LG~G~fG~Vy~a~~~~~-~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lV~E 583 (783)
++|.+.+.||+|.||+||||+.+.. +.||||.+.+....+...+.+.+|++|++.|+|||||.++++|+...++|+|.|
T Consensus 2 e~yhv~e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~gr~~k~l~~l~~ev~i~r~lkHpniv~m~esfEt~~~~~vVte 81 (808)
T KOG0597|consen 2 EQYHVYEMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSGRNEKELKNLRQEVRILRSLKHPNIVEMLESFETSAHLWVVTE 81 (808)
T ss_pred cchhHHHHhcCCccceeeecccccceeEEEEEEehhcCCchHHHHHHHHHHHHHHhcCCcchhhHHHhhcccceEEEEeh
Confidence 5789999999999999999997664 679999999988888888999999999999999999999999999999999999
Q ss_pred ecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCcccccccccc
Q 003963 584 FLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETYLTT 663 (783)
Q Consensus 584 ~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~~~~ 663 (783)
||.| +|+.+|... ..++++.+..++.+++.||.|||+++ |+|||+||.|||+..+|.+|+||||+++.........
T Consensus 82 ~a~g-~L~~il~~d-~~lpEe~v~~~a~~LVsaL~yLhs~r--ilhrd~kPqniLl~~~~~~KlcdFg~Ar~m~~~t~vl 157 (808)
T KOG0597|consen 82 YAVG-DLFTILEQD-GKLPEEQVRAIAYDLVSALYYLHSNR--ILHRDMKPQNILLEKGGTLKLCDFGLARAMSTNTSVL 157 (808)
T ss_pred hhhh-hHHHHHHhc-cCCCHHHHHHHHHHHHHHHHHHHhcC--cccccCCcceeeecCCCceeechhhhhhhcccCceee
Confidence 9976 999999874 46999999999999999999999998 9999999999999999999999999999877766666
Q ss_pred cCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhcccccccCCCCCCHHHHHHHHHhh
Q 003963 664 KTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAAIVESCW 743 (783)
Q Consensus 664 ~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~l~~LI~~cL 743 (783)
....|||.|||||++.+.+|+..+|+|||||++|||++|++||......++...| .......|...+..+..|+..+|
T Consensus 158 tsikGtPlYmAPElv~e~pyd~~sDlWslGcilYE~~~G~PPF~a~si~~Lv~~I--~~d~v~~p~~~S~~f~nfl~gLL 235 (808)
T KOG0597|consen 158 TSIKGTPLYMAPELVEEQPYDHTSDLWSLGCILYELYVGQPPFYARSITQLVKSI--LKDPVKPPSTASSSFVNFLQGLL 235 (808)
T ss_pred eeccCcccccCHHHHcCCCccchhhHHHHHHHHHHHhcCCCCchHHHHHHHHHHH--hcCCCCCcccccHHHHHHHHHHh
Confidence 6778999999999999999999999999999999999999999888777777666 44556667789999999999999
Q ss_pred hhCCCCCCCHHHHHHHHHHHHHHHhhc
Q 003963 744 HSDPQCRPSFQELVDKLRDLQRQYFQA 770 (783)
Q Consensus 744 ~~dP~~RPsa~ell~~L~~L~~~~f~~ 770 (783)
.+||.+|.+..++ +.|+|.+.
T Consensus 236 ~kdP~~RltW~~L------l~HpF~k~ 256 (808)
T KOG0597|consen 236 IKDPAQRLTWTDL------LGHPFWKG 256 (808)
T ss_pred hcChhhcccHHHH------hcChHHhh
Confidence 9999999999999 67887754
No 15
>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=8e-44 Score=395.80 Aligned_cols=259 Identities=25% Similarity=0.440 Sum_probs=233.3
Q ss_pred cccccceeEeeeeccCCcEEEEEEEEeCC-ceEEEEEEecccC-CHHHHHHHHHHHHHHHhCC-CCceeeEeceeecCCc
Q 003963 501 EILWEDLTIGEQIGQGSCGTVYHAVWYGS-QDVAVKVFSRQEY-SDEVIHSFRQEVSLMKRLR-HPNVLLFMGAVTSPQR 577 (783)
Q Consensus 501 e~~~~~y~i~~~LG~G~fG~Vy~a~~~~~-~~vAiK~i~~~~~-~~~~~~~~~~Ei~il~~l~-HpnIv~l~~~~~~~~~ 577 (783)
....++|.++++||+|.||+|+++..+++ +.||||++++..+ .++.++..+.|.+|+.... ||++++++..|+...+
T Consensus 364 ~~~l~~F~~l~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~~HPFL~~L~~~fQT~~~ 443 (694)
T KOG0694|consen 364 PLTLDDFRLLAVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDILQRDEVESLMCEKRIFELANRHPFLVNLFSCFQTKEH 443 (694)
T ss_pred cccccceEEEEEeccCcCceEEEEEEcCCCcEEEEEEeeccceeccccHHHHHHHHHHHHHhccCCeEeecccccccCCe
Confidence 34568999999999999999999998765 5699999998764 4466788889999999885 9999999999999999
Q ss_pred eEEEEEecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCcccc
Q 003963 578 LCIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKH 657 (783)
Q Consensus 578 ~~lV~E~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~ 657 (783)
+|+||||+.||++..+.+ ...+++..+..++.+|+.||.|||++| |||||||.+|||+|.+|++||+|||+++...
T Consensus 444 l~fvmey~~Ggdm~~~~~--~~~F~e~rarfyaAev~l~L~fLH~~~--IIYRDlKLdNiLLD~eGh~kiADFGlcKe~m 519 (694)
T KOG0694|consen 444 LFFVMEYVAGGDLMHHIH--TDVFSEPRARFYAAEVVLGLQFLHENG--IIYRDLKLDNLLLDTEGHVKIADFGLCKEGM 519 (694)
T ss_pred EEEEEEecCCCcEEEEEe--cccccHHHHHHHHHHHHHHHHHHHhcC--ceeeecchhheEEcccCcEEecccccccccC
Confidence 999999999999544433 456999999999999999999999999 9999999999999999999999999998776
Q ss_pred cccccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhcccccccCCCCCCHHHHH
Q 003963 658 ETYLTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAA 737 (783)
Q Consensus 658 ~~~~~~~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~l~~ 737 (783)
-....+.++||||.|||||++.+..|+.++|+|||||+|||||.|..||.+.+..+++..| .+....+|..++.+..+
T Consensus 520 ~~g~~TsTfCGTpey~aPEil~e~~Yt~aVDWW~lGVLlyeML~Gq~PF~gddEee~FdsI--~~d~~~yP~~ls~ea~~ 597 (694)
T KOG0694|consen 520 GQGDRTSTFCGTPEFLAPEVLTEQSYTRAVDWWGLGVLLYEMLVGESPFPGDDEEEVFDSI--VNDEVRYPRFLSKEAIA 597 (694)
T ss_pred CCCCccccccCChhhcChhhhccCcccchhhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHH--hcCCCCCCCcccHHHHH
Confidence 5666788999999999999999999999999999999999999999999999999999988 56677888999999999
Q ss_pred HHHHhhhhCCCCCCCH-----HHHHHHHHHHHHHHhhcC
Q 003963 738 IVESCWHSDPQCRPSF-----QELVDKLRDLQRQYFQAS 771 (783)
Q Consensus 738 LI~~cL~~dP~~RPsa-----~ell~~L~~L~~~~f~~~ 771 (783)
+++++|.++|++|..+ .+| .+|+||..|
T Consensus 598 il~~ll~k~p~kRLG~~e~d~~~i------~~hpFFr~i 630 (694)
T KOG0694|consen 598 IMRRLLRKNPEKRLGSGERDAEDI------KKHPFFRSI 630 (694)
T ss_pred HHHHHhccCcccccCCCCCCchhh------hhCCccccC
Confidence 9999999999999854 566 578999765
No 16
>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=8.4e-44 Score=388.43 Aligned_cols=262 Identities=37% Similarity=0.651 Sum_probs=236.2
Q ss_pred ccccccccceeEeeeeccCCcEEEEEEEEeCCceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEeceeecCCc
Q 003963 498 LDYEILWEDLTIGEQIGQGSCGTVYHAVWYGSQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQR 577 (783)
Q Consensus 498 ~~~e~~~~~y~i~~~LG~G~fG~Vy~a~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~ 577 (783)
..|++..+.+++++.||+|.||.||+|.+.+..+||+|.++....+. +.|.+|+++|+.|+|+|||+++++|..++.
T Consensus 199 d~wei~r~~l~l~~~LG~G~FG~V~~g~~~~~~~vavk~ik~~~m~~---~~f~~Ea~iMk~L~H~~lV~l~gV~~~~~p 275 (468)
T KOG0197|consen 199 DPWEIPREELKLIRELGSGQFGEVWLGKWNGSTKVAVKTIKEGSMSP---EAFLREAQIMKKLRHEKLVKLYGVCTKQEP 275 (468)
T ss_pred CCeeecHHHHHHHHHhcCCccceEEEEEEcCCCcccceEEeccccCh---hHHHHHHHHHHhCcccCeEEEEEEEecCCc
Confidence 45677778889999999999999999999998899999998876554 467799999999999999999999999889
Q ss_pred eEEEEEecCCCCHHHHHhh-cCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCccc
Q 003963 578 LCIVTEFLPRGSLFRLLQR-NTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLK 656 (783)
Q Consensus 578 ~~lV~E~~~ggsL~~~L~~-~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~ 656 (783)
+|||||||+.|+|.++|+. .+..+.....+.++.||++||+||++++ +|||||.+.||||+++..+||+|||+++..
T Consensus 276 iyIVtE~m~~GsLl~yLr~~~~~~l~~~~Ll~~a~qIaeGM~YLes~~--~IHRDLAARNiLV~~~~~vKIsDFGLAr~~ 353 (468)
T KOG0197|consen 276 IYIVTEYMPKGSLLDYLRTREGGLLNLPQLLDFAAQIAEGMAYLESKN--YIHRDLAARNILVDEDLVVKISDFGLARLI 353 (468)
T ss_pred eEEEEEecccCcHHHHhhhcCCCccchHHHHHHHHHHHHHHHHHHhCC--ccchhhhhhheeeccCceEEEccccccccc
Confidence 9999999999999999986 6677999999999999999999999999 999999999999999999999999999965
Q ss_pred ccccc-cccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCChHHHHHHhhcccccccCCCCCCHH
Q 003963 657 HETYL-TTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELAT-EKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPR 734 (783)
Q Consensus 657 ~~~~~-~~~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~ 734 (783)
.+... ......-+..|.|||.+....++.++|||||||+||||+| |+.||.+++..+++..+. .+.+++-|..+|++
T Consensus 354 ~d~~Y~~~~~~kfPIkWtAPEa~~~~~FS~kSDVWSFGVlL~E~fT~G~~py~~msn~ev~~~le-~GyRlp~P~~CP~~ 432 (468)
T KOG0197|consen 354 GDDEYTASEGGKFPIKWTAPEALNYGKFSSKSDVWSFGVLLWELFTYGRVPYPGMSNEEVLELLE-RGYRLPRPEGCPDE 432 (468)
T ss_pred CCCceeecCCCCCCceecCHHHHhhCCcccccceeehhhhHHHHhccCCCCCCCCCHHHHHHHHh-ccCcCCCCCCCCHH
Confidence 54433 3333445679999999999999999999999999999999 999999999999998885 56788899999999
Q ss_pred HHHHHHHhhhhCCCCCCCHHHHHHHHHHHHH
Q 003963 735 WAAIVESCWHSDPQCRPSFQELVDKLRDLQR 765 (783)
Q Consensus 735 l~~LI~~cL~~dP~~RPsa~ell~~L~~L~~ 765 (783)
+.+++..||+.+|++|||+..+...|+++..
T Consensus 433 vY~lM~~CW~~~P~~RPtF~~L~~~l~~~~~ 463 (468)
T KOG0197|consen 433 VYELMKSCWHEDPEDRPTFETLREVLEDFFT 463 (468)
T ss_pred HHHHHHHHhhCCcccCCCHHHHHHHHHHhhh
Confidence 9999999999999999999988888776643
No 17
>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]
Probab=100.00 E-value=1.1e-43 Score=385.06 Aligned_cols=259 Identities=24% Similarity=0.409 Sum_probs=224.7
Q ss_pred cccceeEeeeeccCCcEEEEEEEEeCC-ceEEEEEEecccC-CHHHHHHHHHHHHHHHhCCCCceeeEeceeecCCceEE
Q 003963 503 LWEDLTIGEQIGQGSCGTVYHAVWYGS-QDVAVKVFSRQEY-SDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCI 580 (783)
Q Consensus 503 ~~~~y~i~~~LG~G~fG~Vy~a~~~~~-~~vAiK~i~~~~~-~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~l 580 (783)
..++|+++++||+|+||.||+|+.+.+ .-||+|++++... ...++.-++.|-.+|....+|+||++|..|++..++||
T Consensus 139 ~~~DFe~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~ds~~vVKLyYsFQD~~~LYL 218 (550)
T KOG0605|consen 139 SLDDFELLKVIGKGAFGEVRLARKKDTGEIYAMKILKKSEMLKKNQVEHVRAERDILAEVDSPWVVKLYYSFQDKEYLYL 218 (550)
T ss_pred CcccchhheeeccccceeEEEEEEccCCcEEeeecccHHHHHhhhhHHHHHHHHHHhhhcCCCcEEEEEEEecCCCeeEE
Confidence 467999999999999999999998765 5589999988764 34677888999999999999999999999999999999
Q ss_pred EEEecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCccccc--
Q 003963 581 VTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHE-- 658 (783)
Q Consensus 581 V~E~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~~-- 658 (783)
||||++||++..+|.+. ..|++..+..++.+++.|+..||++| +|||||||+|+|||..|++||+|||++.-...
T Consensus 219 iMEylPGGD~mTLL~~~-~~L~e~~arfYiaE~vlAI~~iH~~g--yIHRDIKPdNlLiD~~GHiKLSDFGLs~gl~~~~ 295 (550)
T KOG0605|consen 219 IMEYLPGGDMMTLLMRK-DTLTEDWARFYIAETVLAIESIHQLG--YIHRDIKPDNLLIDAKGHIKLSDFGLSTGLDKKH 295 (550)
T ss_pred EEEecCCccHHHHHHhc-CcCchHHHHHHHHHHHHHHHHHHHcC--cccccCChhheeecCCCCEeeccccccchhhhhh
Confidence 99999999999999874 46999999999999999999999999 99999999999999999999999999852111
Q ss_pred ---------------------ccc------------------------cccCCCCCCcccCcccccCCCCCchhHHHHHH
Q 003963 659 ---------------------TYL------------------------TTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFG 693 (783)
Q Consensus 659 ---------------------~~~------------------------~~~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG 693 (783)
... .....+|||.|||||++.+..|+...|+||||
T Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~nrr~~a~StVGTPDYiAPEVll~kgY~~~cDwWSLG 375 (550)
T KOG0605|consen 296 RIESYRLDEQMQINLSEAKPSDFPKFNTPRSTMSRREQLQTWKRNRRQLAYSTVGTPDYIAPEVLLGKGYGKECDWWSLG 375 (550)
T ss_pred hhhhhcchhhhhhhhccCCCccccccccccchhhHHHHHHHHHhhhhhhhhcccCCccccchHHHhcCCCCccccHHHHH
Confidence 000 01123599999999999999999999999999
Q ss_pred HHHHHHHcCCCCCCCCChHHHHHHhhcccccccCCC--CCCHHHHHHHHHhhhhCCCCCCC---HHHHHHHHHHHHHHHh
Q 003963 694 VILWELATEKIPWDNLNSMQVIGAVGFMNQRLEIPK--DVDPRWAAIVESCWHSDPQCRPS---FQELVDKLRDLQRQYF 768 (783)
Q Consensus 694 ~il~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~--~~s~~l~~LI~~cL~~dP~~RPs---a~ell~~L~~L~~~~f 768 (783)
|||||||.|.+||...++.+....+......+.+|. .+++++.+||.+||. ||++|.. +.|| -.|+||
T Consensus 376 ~ImyEmLvGyPPF~s~tp~~T~rkI~nwr~~l~fP~~~~~s~eA~DLI~rll~-d~~~RLG~~G~~EI------K~HPfF 448 (550)
T KOG0605|consen 376 CIMYEMLVGYPPFCSETPQETYRKIVNWRETLKFPEEVDLSDEAKDLITRLLC-DPENRLGSKGAEEI------KKHPFF 448 (550)
T ss_pred HHHHHHHhCCCCCCCCCHHHHHHHHHHHhhhccCCCcCcccHHHHHHHHHHhc-CHHHhcCcccHHHH------hcCCcc
Confidence 999999999999999999999988866555555554 478999999999999 9999975 6666 578999
Q ss_pred hcC
Q 003963 769 QAS 771 (783)
Q Consensus 769 ~~~ 771 (783)
+.+
T Consensus 449 ~~v 451 (550)
T KOG0605|consen 449 KGV 451 (550)
T ss_pred ccC
Confidence 653
No 18
>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=1.1e-42 Score=366.68 Aligned_cols=265 Identities=22% Similarity=0.368 Sum_probs=228.4
Q ss_pred ccccccceeEeeeeccCCcEEEEEEEEeCC-ceEEEEEEecccCC-HHHHHHHHHHHHHHHhCCCCceeeEeceeecCCc
Q 003963 500 YEILWEDLTIGEQIGQGSCGTVYHAVWYGS-QDVAVKVFSRQEYS-DEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQR 577 (783)
Q Consensus 500 ~e~~~~~y~i~~~LG~G~fG~Vy~a~~~~~-~~vAiK~i~~~~~~-~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~ 577 (783)
......+|++++.||+|.-|+||++...+. ..+|+|++.+.... .+...++..|.+||+.++||.++.+|..|+.+..
T Consensus 72 ~~l~l~~f~llk~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~lDHPFlPTLYa~fet~~~ 151 (459)
T KOG0610|consen 72 GSLGLRHFRLLKRLGCGDIGTVYLVELRGTNCLFAMKVMDKESLASRKKLKRAQTEREILSLLDHPFLPTLYASFETDKY 151 (459)
T ss_pred CccCHHHHHHHHHcCCCCceeEEEEEecCCCceEEEEEecHHHHhhhhHHHHHHHHHHHHHhcCCCccchhhheeeccce
Confidence 345567899999999999999999998775 67999999887654 4556778889999999999999999999999999
Q ss_pred eEEEEEecCCCCHHHHHhhc-CCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCccc
Q 003963 578 LCIVTEFLPRGSLFRLLQRN-TTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLK 656 (783)
Q Consensus 578 ~~lV~E~~~ggsL~~~L~~~-~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~ 656 (783)
.|+|||||+||+|..+++++ ...+++..+..++.+++-||+|||..| ||+|||||+||||-++|+|+|+||.++...
T Consensus 152 ~cl~meyCpGGdL~~LrqkQp~~~fse~~aRFYaAEvl~ALEYLHmlG--ivYRDLKPENILvredGHIMLsDFDLS~~~ 229 (459)
T KOG0610|consen 152 SCLVMEYCPGGDLHSLRQKQPGKRFSESAARFYAAEVLLALEYLHMLG--IVYRDLKPENILVREDGHIMLSDFDLSLRC 229 (459)
T ss_pred eEEEEecCCCccHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHhhc--eeeccCCcceeEEecCCcEEeeeccccccC
Confidence 99999999999999999764 455999999999999999999999999 999999999999999999999999986421
Q ss_pred cc-----------------------------------c---------------------cccccCCCCCCcccCcccccC
Q 003963 657 HE-----------------------------------T---------------------YLTTKTGKGTPQWMAPEVLRN 680 (783)
Q Consensus 657 ~~-----------------------------------~---------------------~~~~~~~~Gt~~Y~aPE~~~~ 680 (783)
.. . .....+++||-.|+|||++.|
T Consensus 230 ~~~Pt~~~s~~~~~~~~~~~~~~~~~s~f~~r~~~~~~~~~k~~~~~~~~~p~~~aep~~~RSnSFVGThEYlAPEvI~G 309 (459)
T KOG0610|consen 230 PVSPTLVKSSSPRSSGSQPSCRSRQPSCFSPRCLSSSKKRKKKDESASRSLPELVAEPTGARSNSFVGTHEYLAPEVIRG 309 (459)
T ss_pred CCCCeeeccCCCCCCCCCcccccccccccccchhccccccccccccccccchhhhcCCCCccccccccccccccceeeec
Confidence 00 0 011234579999999999999
Q ss_pred CCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhcccccccCCCCCCHHHHHHHHHhhhhCCCCCCC----HHHH
Q 003963 681 EPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAAIVESCWHSDPQCRPS----FQEL 756 (783)
Q Consensus 681 ~~~s~~sDIwSLG~il~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~l~~LI~~cL~~dP~~RPs----a~el 756 (783)
..++.++|+|+|||+|||||.|..||.+.+..+.+.++......++-...++-.+++||+++|.+||.+|.. +.||
T Consensus 310 ~GHgsAVDWWtfGIflYEmLyG~TPFKG~~~~~Tl~NIv~~~l~Fp~~~~vs~~akDLIr~LLvKdP~kRlg~~rGA~eI 389 (459)
T KOG0610|consen 310 EGHGSAVDWWTFGIFLYEMLYGTTPFKGSNNKETLRNIVGQPLKFPEEPEVSSAAKDLIRKLLVKDPSKRLGSKRGAAEI 389 (459)
T ss_pred CCCCchhhHHHHHHHHHHHHhCCCCcCCCCchhhHHHHhcCCCcCCCCCcchhHHHHHHHHHhccChhhhhccccchHHh
Confidence 999999999999999999999999999999999988885443333333467899999999999999999987 7777
Q ss_pred HHHHHHHHHHHhhcCc
Q 003963 757 VDKLRDLQRQYFQASR 772 (783)
Q Consensus 757 l~~L~~L~~~~f~~~~ 772 (783)
-+|+||+..+
T Consensus 390 ------K~HpFF~gVn 399 (459)
T KOG0610|consen 390 ------KRHPFFEGVN 399 (459)
T ss_pred ------hcCccccCCC
Confidence 5799997644
No 19
>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-42 Score=368.81 Aligned_cols=265 Identities=29% Similarity=0.509 Sum_probs=227.1
Q ss_pred cccccccceeEeeeeccCCcEEEEEEEEeC-CceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEeceeecCCc
Q 003963 499 DYEILWEDLTIGEQIGQGSCGTVYHAVWYG-SQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQR 577 (783)
Q Consensus 499 ~~e~~~~~y~i~~~LG~G~fG~Vy~a~~~~-~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~ 577 (783)
.|-...++|++..+||.|..+.||+|++.. +..||||++..++.+.+ +..+.+|+..|+.++||||++++..|..+..
T Consensus 20 ~~p~n~~~YeL~e~IG~G~sa~V~~A~c~p~~e~VAIK~inLEkc~~~-ld~l~kE~~~msl~~HPNIv~~~~sFvv~~~ 98 (516)
T KOG0582|consen 20 EFPLNAKDYELQEVIGVGASAVVYLARCIPTNEVVAIKIINLEKCNND-LDALRKEVQTMSLIDHPNIVTYHCSFVVDSE 98 (516)
T ss_pred cCCCCccceeEEEEEeccceeEeeeeeecccCCEEEEEEeehhhhhhh-HHHHHHHHHHhhhcCCCCcceEEEEEEecce
Confidence 344556899999999999999999999854 46799999998887666 7899999999999999999999999999999
Q ss_pred eEEEEEecCCCCHHHHHhh-cCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCccc
Q 003963 578 LCIVTEFLPRGSLFRLLQR-NTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLK 656 (783)
Q Consensus 578 ~~lV~E~~~ggsL~~~L~~-~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~ 656 (783)
+|+||.||.+|++.+++.. -...+++..+..|.+++++||.|||++| .||||||+.||||+.+|.|||+|||.+...
T Consensus 99 LWvVmpfMa~GS~ldIik~~~~~Gl~E~~Ia~iLre~LkaL~YLH~~G--~IHRdvKAgnILi~~dG~VkLadFgvsa~l 176 (516)
T KOG0582|consen 99 LWVVMPFMAGGSLLDIIKTYYPDGLEEASIATILREVLKALDYLHQNG--HIHRDVKAGNILIDSDGTVKLADFGVSASL 176 (516)
T ss_pred eEEeehhhcCCcHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHhcC--ceecccccccEEEcCCCcEEEcCceeeeee
Confidence 9999999999999999975 3445999999999999999999999999 999999999999999999999999987655
Q ss_pred ccccccc----cCCCCCCcccCcccccC--CCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccccccc----
Q 003963 657 HETYLTT----KTGKGTPQWMAPEVLRN--EPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLE---- 726 (783)
Q Consensus 657 ~~~~~~~----~~~~Gt~~Y~aPE~~~~--~~~s~~sDIwSLG~il~elltG~~Pf~~~~~~~~~~~i~~~~~~~~---- 726 (783)
....... .+.+||+.|||||+++. ..|+.|+||||||++..||.+|+.||..+.+.+++... ++..++
T Consensus 177 ~~~G~R~~~rf~tfvgtp~wmAPEvl~q~~~GYdfKaDIwSfGITA~ELA~G~aPf~k~pPmkvLl~t--Lqn~pp~~~t 254 (516)
T KOG0582|consen 177 FDSGDRQVTRFNTFVGTPCWMAPEVLMQQLHGYDFKADIWSFGITACELAHGHAPFSKYPPMKVLLLT--LQNDPPTLLT 254 (516)
T ss_pred cccCceeeEeeccccCcccccChHHhhhcccCccchhhhhhhhHHHHHHhcCCCCcccCChHHHHHHH--hcCCCCCccc
Confidence 4433222 45689999999999543 45789999999999999999999999999998876443 222222
Q ss_pred ------CCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhcCcCC
Q 003963 727 ------IPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQASRST 774 (783)
Q Consensus 727 ------~~~~~s~~l~~LI~~cL~~dP~~RPsa~ell~~L~~L~~~~f~~~~~~ 774 (783)
....++..++.+|..||++||.+|||+.++ |.|+|||..+.-
T Consensus 255 ~~~~~d~~k~~~ksf~e~i~~CL~kDP~kRptAskL------lkh~FFk~~k~~ 302 (516)
T KOG0582|consen 255 SGLDKDEDKKFSKSFREMIALCLVKDPSKRPTASKL------LKHAFFKKAKSK 302 (516)
T ss_pred ccCChHHhhhhcHHHHHHHHHHhhcCcccCCCHHHH------hccHHHhhccch
Confidence 123466789999999999999999999999 788999876653
No 20
>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=7.8e-44 Score=380.38 Aligned_cols=261 Identities=25% Similarity=0.372 Sum_probs=223.3
Q ss_pred cccceeEeeeeccCCcEEEEEEEEeC-CceEEEEEEecccCCHHHHHHHHHHHHHHHhCC-CCceeeEeceeecCC-ceE
Q 003963 503 LWEDLTIGEQIGQGSCGTVYHAVWYG-SQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLR-HPNVLLFMGAVTSPQ-RLC 579 (783)
Q Consensus 503 ~~~~y~i~~~LG~G~fG~Vy~a~~~~-~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~-HpnIv~l~~~~~~~~-~~~ 579 (783)
..++|.++++||.|+||.||+|+.+. +..||||.|++...+-+.+.. .||+.-|++|+ |||||++.+++.+.+ .+|
T Consensus 8 ~m~RY~~i~klGDGTfGsV~la~~~~~~~~VAIK~MK~Kf~s~ee~~n-LREvksL~kln~hpniikL~Evi~d~~~~L~ 86 (538)
T KOG0661|consen 8 FMDRYTVIRKLGDGTFGSVYLAKSKETGELVAIKKMKKKFYSWEECMN-LREVKSLRKLNPHPNIIKLKEVIRDNDRILY 86 (538)
T ss_pred HHHHHHHHHHhcCCcceeEEEeeecCCCceeeHHHHHhhhccHHHHHH-HHHHHHHHhcCCCCcchhhHHHhhccCceEe
Confidence 45789999999999999999999754 467999999888776554444 46999999998 999999999998887 899
Q ss_pred EEEEecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCcccccc
Q 003963 580 IVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHET 659 (783)
Q Consensus 580 lV~E~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~~~ 659 (783)
+||||| ..+|+++++.++..+++..+..|+.||++||+|+|.+| +.|||+||+||||..+..|||+|||+|+.....
T Consensus 87 fVfE~M-d~NLYqLmK~R~r~fse~~irnim~QilqGL~hiHk~G--fFHRDlKPENiLi~~~~~iKiaDFGLARev~Sk 163 (538)
T KOG0661|consen 87 FVFEFM-DCNLYQLMKDRNRLFSESDIRNIMYQILQGLAHIHKHG--FFHRDLKPENILISGNDVIKIADFGLAREVRSK 163 (538)
T ss_pred eeHHhh-hhhHHHHHhhcCCcCCHHHHHHHHHHHHHHHHHHHhcC--cccccCChhheEecccceeEecccccccccccC
Confidence 999999 45999999988889999999999999999999999999 999999999999998889999999999976654
Q ss_pred cccccCCCCCCcccCccccc-CCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhcccccc-------------
Q 003963 660 YLTTKTGKGTPQWMAPEVLR-NEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRL------------- 725 (783)
Q Consensus 660 ~~~~~~~~Gt~~Y~aPE~~~-~~~~s~~sDIwSLG~il~elltG~~Pf~~~~~~~~~~~i~~~~~~~------------- 725 (783)
...+ ..+.|..|+|||++. ...|+.+.|||++|||++|+++-++.|.+.+..+.+..+....+.+
T Consensus 164 pPYT-eYVSTRWYRAPEvLLrs~~Ys~pvD~wA~GcI~aEl~sLrPLFPG~sE~Dqi~KIc~VLGtP~~~~~~eg~~La~ 242 (538)
T KOG0661|consen 164 PPYT-EYVSTRWYRAPEVLLRSGYYSSPVDMWAVGCIMAELYSLRPLFPGASEIDQIYKICEVLGTPDKDSWPEGYNLAS 242 (538)
T ss_pred CCcc-hhhhcccccchHHhhhccccCCchHHHHHHHHHHHHHHhcccCCCCcHHHHHHHHHHHhCCCccccchhHHHHHH
Confidence 3333 456799999999865 5678999999999999999999999999998877666553222111
Q ss_pred ----c-----------CCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhcCcCC
Q 003963 726 ----E-----------IPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQASRST 774 (783)
Q Consensus 726 ----~-----------~~~~~s~~l~~LI~~cL~~dP~~RPsa~ell~~L~~L~~~~f~~~~~~ 774 (783)
. +.+.++.++.+||..||.+||.+||||.++ |+++|||.....
T Consensus 243 ~mnf~~P~~~~~~l~~L~p~~s~~~~~li~~ll~WDP~kRpTA~~a------l~~pffq~~~~~ 300 (538)
T KOG0661|consen 243 AMNFRFPQVKPSPLKDLLPNASSEAASLIERLLAWDPDKRPTASQA------LQHPFFQVGRAS 300 (538)
T ss_pred HhccCCCcCCCCChHHhCcccCHHHHHHHHHHhcCCCccCccHHHH------hcCccccccccc
Confidence 1 113478899999999999999999999999 789999876654
No 21
>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=6e-43 Score=382.24 Aligned_cols=254 Identities=29% Similarity=0.505 Sum_probs=227.4
Q ss_pred ccceeEeeeeccCCcEEEEEEEEeC-CceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEeceeecCCceEEEE
Q 003963 504 WEDLTIGEQIGQGSCGTVYHAVWYG-SQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIVT 582 (783)
Q Consensus 504 ~~~y~i~~~LG~G~fG~Vy~a~~~~-~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lV~ 582 (783)
...|...++||+|+.|.||.+.... ++.||||.+........ +-+.+|+.+|+..+|+|||++++.|-..+.+|+||
T Consensus 272 ~~~y~~~~kigqgaSG~vy~A~~~~~~~~VaiK~m~l~~Q~~k--eLilnEi~Vm~~~~H~NiVnfl~Sylv~deLWVVM 349 (550)
T KOG0578|consen 272 RSKYTDFKKIGQGATGGVYVARKISTKQEVAIKRMDLRKQPKK--ELLLNEILVMRDLHHPNIVNFLDSYLVGDELWVVM 349 (550)
T ss_pred hhhhcchhhhccccccceeeeeeccCCceEEEEEEEeccCCch--hhhHHHHHHHHhccchHHHHHHHHhcccceeEEEE
Confidence 4578888999999999999998754 46799999987665443 46789999999999999999999998889999999
Q ss_pred EecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCccccccccc
Q 003963 583 EFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETYLT 662 (783)
Q Consensus 583 E~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~~~ 662 (783)
|||+||+|-+.+... .+++.++..|++++++||+|||.+| |||||||.+|||++.+|.|||+|||++..+......
T Consensus 350 Eym~ggsLTDvVt~~--~~~E~qIA~Icre~l~aL~fLH~~g--IiHrDIKSDnILL~~~g~vKltDFGFcaqi~~~~~K 425 (550)
T KOG0578|consen 350 EYMEGGSLTDVVTKT--RMTEGQIAAICREILQGLKFLHARG--IIHRDIKSDNILLTMDGSVKLTDFGFCAQISEEQSK 425 (550)
T ss_pred eecCCCchhhhhhcc--cccHHHHHHHHHHHHHHHHHHHhcc--eeeeccccceeEeccCCcEEEeeeeeeeccccccCc
Confidence 999999999999864 4999999999999999999999999 999999999999999999999999999877766556
Q ss_pred ccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhcc-cccccCCCCCCHHHHHHHHH
Q 003963 663 TKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFM-NQRLEIPKDVDPRWAAIVES 741 (783)
Q Consensus 663 ~~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~elltG~~Pf~~~~~~~~~~~i~~~-~~~~~~~~~~s~~l~~LI~~ 741 (783)
..+.+|||.|||||++....|++++||||||++.+||+.|.+||-+.++.+.+..+..- ...+..+..+++.+++|+.+
T Consensus 426 R~TmVGTPYWMAPEVvtrk~YG~KVDIWSLGIMaIEMveGEPPYlnE~PlrAlyLIa~ng~P~lk~~~klS~~~kdFL~~ 505 (550)
T KOG0578|consen 426 RSTMVGTPYWMAPEVVTRKPYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATNGTPKLKNPEKLSPELKDFLDR 505 (550)
T ss_pred cccccCCCCccchhhhhhcccCccccchhhhhHHHHHhcCCCCccCCChHHHHHHHhhcCCCCcCCccccCHHHHHHHHH
Confidence 66889999999999999999999999999999999999999999888887777666432 23556678899999999999
Q ss_pred hhhhCCCCCCCHHHHHHHHHHHHHHHhh
Q 003963 742 CWHSDPQCRPSFQELVDKLRDLQRQYFQ 769 (783)
Q Consensus 742 cL~~dP~~RPsa~ell~~L~~L~~~~f~ 769 (783)
||..|+.+|+++.+| |+|+||+
T Consensus 506 cL~~dv~~RasA~eL------L~HpFl~ 527 (550)
T KOG0578|consen 506 CLVVDVEQRASAKEL------LEHPFLK 527 (550)
T ss_pred HhhcchhcCCCHHHH------hcChhhh
Confidence 999999999999999 7889984
No 22
>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]
Probab=100.00 E-value=1.3e-42 Score=347.13 Aligned_cols=257 Identities=23% Similarity=0.325 Sum_probs=223.4
Q ss_pred cceeEeeeeccCCcEEEEEEEEeC-CceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEeceeecCCceEEEEE
Q 003963 505 EDLTIGEQIGQGSCGTVYHAVWYG-SQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIVTE 583 (783)
Q Consensus 505 ~~y~i~~~LG~G~fG~Vy~a~~~~-~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lV~E 583 (783)
.+|...++||+|.||.||+|.+.. ++.||||+++.....+.......+|+..|+.++|+||+.++++|...+.+.||+|
T Consensus 2 ~rY~~~~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~kdGi~~talREIK~Lqel~h~nIi~LiD~F~~~~~l~lVfE 81 (318)
T KOG0659|consen 2 DRYEKLEKLGEGTYGVVYKARDTETGKRVAIKKIKLGNAKDGINRTALREIKLLQELKHPNIIELIDVFPHKSNLSLVFE 81 (318)
T ss_pred chhhhhhhhcCcceEEEEEEEecCCCcEEEEEEeeccccccCccHHHHHHHHHHHHccCcchhhhhhhccCCCceEEEEE
Confidence 468888999999999999999754 5789999999887776666778899999999999999999999999999999999
Q ss_pred ecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCcccccccccc
Q 003963 584 FLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETYLTT 663 (783)
Q Consensus 584 ~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~~~~ 663 (783)
|++. +|+..++.....++...+..++.++++||+|||++. |+||||||.|+||+.+|.+||+|||+++.+.......
T Consensus 82 fm~t-dLe~vIkd~~i~l~pa~iK~y~~m~LkGl~y~H~~~--IlHRDlKPnNLLis~~g~lKiADFGLAr~f~~p~~~~ 158 (318)
T KOG0659|consen 82 FMPT-DLEVVIKDKNIILSPADIKSYMLMTLKGLAYCHSKW--ILHRDLKPNNLLISSDGQLKIADFGLARFFGSPNRIQ 158 (318)
T ss_pred eccc-cHHHHhcccccccCHHHHHHHHHHHHHHHHHHHhhh--hhcccCCccceEEcCCCcEEeecccchhccCCCCccc
Confidence 9964 999999988889999999999999999999999999 9999999999999999999999999999888765555
Q ss_pred cCCCCCCcccCcccccCC-CCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhcccccc-----------------
Q 003963 664 KTGKGTPQWMAPEVLRNE-PSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRL----------------- 725 (783)
Q Consensus 664 ~~~~Gt~~Y~aPE~~~~~-~~s~~sDIwSLG~il~elltG~~Pf~~~~~~~~~~~i~~~~~~~----------------- 725 (783)
...+-|..|+|||.+.|. .|+..+||||.||++.||+.|.+-|.+.+..+.+..+-...+.+
T Consensus 159 ~~~V~TRWYRAPELLfGsr~Yg~~VDmWavGCI~AELllr~P~fpG~sDidQL~~If~~LGTP~~~~WP~~~~lpdY~~~ 238 (318)
T KOG0659|consen 159 THQVVTRWYRAPELLFGSRQYGTGVDMWAVGCIFAELLLRVPFFPGDSDIDQLSKIFRALGTPTPDQWPEMTSLPDYVKI 238 (318)
T ss_pred ccceeeeeccChHHhccchhcCCcchhhhHHHHHHHHHccCCCCCCCchHHHHHHHHHHcCCCCcccCccccccccHHHH
Confidence 555779999999998875 48999999999999999999999999888776665432111110
Q ss_pred ---c------CCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhc
Q 003963 726 ---E------IPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQA 770 (783)
Q Consensus 726 ---~------~~~~~s~~l~~LI~~cL~~dP~~RPsa~ell~~L~~L~~~~f~~ 770 (783)
+ +....+.++.+|+.+||..||.+|+++.|+ |+++||+.
T Consensus 239 ~~~P~~~~~~lf~aas~d~ldLl~~m~~ynP~~Rita~qa------L~~~yf~~ 286 (318)
T KOG0659|consen 239 QQFPKPPLNNLFPAASSDALDLLSKMLTYNPKKRITASQA------LKHPYFKS 286 (318)
T ss_pred hcCCCCccccccccccHHHHHHHHhhhccCchhcccHHHH------hcchhhhc
Confidence 0 112346678999999999999999999999 78899986
No 23
>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]
Probab=100.00 E-value=1.8e-42 Score=379.12 Aligned_cols=272 Identities=39% Similarity=0.665 Sum_probs=238.4
Q ss_pred ccccccccceeEeeeeccCCcEEEEEEEEeCCceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEeceeecCCc
Q 003963 498 LDYEILWEDLTIGEQIGQGSCGTVYHAVWYGSQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQR 577 (783)
Q Consensus 498 ~~~e~~~~~y~i~~~LG~G~fG~Vy~a~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~ 577 (783)
.+|++..+.+.++..||+|.||+||+|.+.+ .||||++......++..+.|++|+.+|++-+|.||+-|+|++..+..
T Consensus 385 ~~WeIp~~ev~l~~rIGsGsFGtV~Rg~whG--dVAVK~Lnv~~pt~~qlqaFKnEVa~lkkTRH~NIlLFMG~~~~p~~ 462 (678)
T KOG0193|consen 385 EEWEIPPEEVLLGERIGSGSFGTVYRGRWHG--DVAVKLLNVDDPTPEQLQAFKNEVAVLKKTRHENILLFMGACMNPPL 462 (678)
T ss_pred cccccCHHHhhccceeccccccceeeccccc--ceEEEEEecCCCCHHHHHHHHHHHHHHhhcchhhheeeehhhcCCce
Confidence 5788999999999999999999999999986 79999999999999999999999999999999999999999999887
Q ss_pred eEEEEEecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCcccc
Q 003963 578 LCIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKH 657 (783)
Q Consensus 578 ~~lV~E~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~ 657 (783)
.||.-+|+|-+|+.+|.-...++.....+.|++||++||.|||.++ |||||||..||++.+++.|||+|||++....
T Consensus 463 -AIiTqwCeGsSLY~hlHv~etkfdm~~~idIAqQiaqGM~YLHAK~--IIHrDLKSnNIFl~~~~kVkIgDFGLatvk~ 539 (678)
T KOG0193|consen 463 -AIITQWCEGSSLYTHLHVQETKFDMNTTIDIAQQIAQGMDYLHAKN--IIHRDLKSNNIFLHEDLKVKIGDFGLATVKT 539 (678)
T ss_pred -eeeehhccCchhhhhccchhhhhhHHHHHHHHHHHHHhhhhhhhhh--hhhhhccccceEEccCCcEEEecccceeeee
Confidence 9999999999999999887888999999999999999999999998 9999999999999999999999999986543
Q ss_pred ccc--ccccCCCCCCcccCccccc---CCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhcc---cccccCCC
Q 003963 658 ETY--LTTKTGKGTPQWMAPEVLR---NEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFM---NQRLEIPK 729 (783)
Q Consensus 658 ~~~--~~~~~~~Gt~~Y~aPE~~~---~~~~s~~sDIwSLG~il~elltG~~Pf~~~~~~~~~~~i~~~---~~~~~~~~ 729 (783)
.-. .......|...|||||+++ ..+|++.+|||||||++|||++|.+||...+..+.+..+... .....+..
T Consensus 540 ~w~g~~q~~qp~gsilwmAPEvIRmqd~nPfS~qSDVYaFGiV~YELltg~lPysi~~~dqIifmVGrG~l~pd~s~~~s 619 (678)
T KOG0193|consen 540 RWSGEQQLEQPHGSLLWMAPEVIRMQDDNPFSFQSDVYAFGIVWYELLTGELPYSIQNRDQIIFMVGRGYLMPDLSKIRS 619 (678)
T ss_pred eeccccccCCCccchhhhcHHHHhhcccCCCCcccchhhhhHHHHHHHhCcCCcCCCChhheEEEecccccCccchhhhc
Confidence 321 1223445788999999986 356799999999999999999999999977776666555433 22334456
Q ss_pred CCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhcCcCC
Q 003963 730 DVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQASRST 774 (783)
Q Consensus 730 ~~s~~l~~LI~~cL~~dP~~RPsa~ell~~L~~L~~~~f~~~~~~ 774 (783)
+++.++++|+..||..++++||.+.+|+..|+.++...-+=.||.
T Consensus 620 ~~pk~mk~Ll~~C~~~~~~eRP~F~~il~~l~~l~~~~pki~RS~ 664 (678)
T KOG0193|consen 620 NCPKAMKRLLSDCWKFDREERPLFPQLLSKLEELLPSLPKINRSA 664 (678)
T ss_pred cCHHHHHHHHHHHHhcCcccCccHHHHHHHHHHhhhcccccccCc
Confidence 788899999999999999999999999999999988655556655
No 24
>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=7.7e-43 Score=375.26 Aligned_cols=261 Identities=25% Similarity=0.348 Sum_probs=224.6
Q ss_pred cccceeEeeeeccCCcEEEEEEEEeC-CceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEeceeecC--CceE
Q 003963 503 LWEDLTIGEQIGQGSCGTVYHAVWYG-SQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSP--QRLC 579 (783)
Q Consensus 503 ~~~~y~i~~~LG~G~fG~Vy~a~~~~-~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~--~~~~ 579 (783)
..+.|+.+++||+|+||.||+|++.. ++.||+|++......+.......+||.||++|.||||+++.++.... ..+|
T Consensus 115 ~~~~feki~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~~~~~~~t~~REI~ILr~l~HpNIikL~eivt~~~~~siY 194 (560)
T KOG0600|consen 115 RADSFEKIEKIGEGTYGQVYKARDLETGKIVALKKVRFDNEKEGFPITAIREIKILRRLDHPNIIKLEEIVTSKLSGSIY 194 (560)
T ss_pred chHHHHHHHHhcCcchhheeEeeecccCcEEEEEEeecccCCCcchHHHHHHHHHHHhcCCCcccceeeEEEecCCceEE
Confidence 34678999999999999999999865 46799999998887777778888999999999999999999998876 6799
Q ss_pred EEEEecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCcccccc
Q 003963 580 IVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHET 659 (783)
Q Consensus 580 lV~E~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~~~ 659 (783)
||+|||+. +|..++......+++.++..++.||+.||.|||.+| |+|||||.+|||||++|.+||+|||+|+++...
T Consensus 195 lVFeYMdh-DL~GLl~~p~vkft~~qIKc~mkQLl~Gl~~cH~~g--vlHRDIK~SNiLidn~G~LKiaDFGLAr~y~~~ 271 (560)
T KOG0600|consen 195 LVFEYMDH-DLSGLLSSPGVKFTEPQIKCYMKQLLEGLEYCHSRG--VLHRDIKGSNILIDNNGVLKIADFGLARFYTPS 271 (560)
T ss_pred EEEecccc-hhhhhhcCCCcccChHHHHHHHHHHHHHHHHHhhcC--eeeccccccceEEcCCCCEEeccccceeeccCC
Confidence 99999976 999999888889999999999999999999999999 999999999999999999999999999976654
Q ss_pred ccc-ccCCCCCCcccCcccccCCC-CCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhcccc--------cccCC-
Q 003963 660 YLT-TKTGKGTPQWMAPEVLRNEP-SDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQ--------RLEIP- 728 (783)
Q Consensus 660 ~~~-~~~~~Gt~~Y~aPE~~~~~~-~s~~sDIwSLG~il~elltG~~Pf~~~~~~~~~~~i~~~~~--------~~~~~- 728 (783)
... ....+-|..|+|||.+.|.. |+.++|+||+||||.||++|+++|.+.+..+.+..|-.+-+ ...+|
T Consensus 272 ~~~~~T~rVvTLWYRpPELLLG~t~Yg~aVDlWS~GCIl~El~~gkPI~~G~tEveQl~kIfklcGSP~e~~W~~~kLP~ 351 (560)
T KOG0600|consen 272 GSAPYTSRVVTLWYRPPELLLGATSYGTAVDLWSVGCILAELFLGKPILQGRTEVEQLHKIFKLCGSPTEDYWPVSKLPH 351 (560)
T ss_pred CCcccccceEEeeccChHHhcCCcccccceeehhhhHHHHHHHcCCCCcCCccHHHHHHHHHHHhCCCChhccccccCCc
Confidence 322 34557799999999998864 89999999999999999999999999988877766532211 11111
Q ss_pred ------------------CCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhcCc
Q 003963 729 ------------------KDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQASR 772 (783)
Q Consensus 729 ------------------~~~s~~l~~LI~~cL~~dP~~RPsa~ell~~L~~L~~~~f~~~~ 772 (783)
..++....+|+..||..||.+|.|+.++ |+++||....
T Consensus 352 ~~~~kp~~~y~r~l~E~~~~~~~~~l~Ll~~lL~ldP~kR~tA~~a------L~seyF~t~p 407 (560)
T KOG0600|consen 352 ATIFKPQQPYKRRLRETFKDFPASALDLLEKLLSLDPDKRGTASSA------LQSEYFTTEP 407 (560)
T ss_pred ccccCCCCcccchHHHHhccCCHHHHHHHHHHhccCccccccHHHH------hcCcccccCC
Confidence 2467788999999999999999999999 7889994433
No 25
>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V
Probab=100.00 E-value=1.7e-41 Score=372.06 Aligned_cols=263 Identities=30% Similarity=0.562 Sum_probs=215.6
Q ss_pred ccccccceeEeeeeccCCcEEEEEEEEeC------CceEEEEEEecccCCHHHHHHHHHHHHHHHhC-CCCceeeEecee
Q 003963 500 YEILWEDLTIGEQIGQGSCGTVYHAVWYG------SQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRL-RHPNVLLFMGAV 572 (783)
Q Consensus 500 ~e~~~~~y~i~~~LG~G~fG~Vy~a~~~~------~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l-~HpnIv~l~~~~ 572 (783)
|++..++|++.++||+|+||.||+|.+.. ++.||||++.... .......+.+|+.++..+ +|||||++++++
T Consensus 2 ~~~~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~ 80 (338)
T cd05102 2 WEFPRDRLRLGKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGA-TASEHKALMSELKILIHIGNHLNVVNLLGAC 80 (338)
T ss_pred cccchhHceeeeEeccCCcceEEEEEEeccCCcccchhhheecccccc-chHHHHHHHHHHHHHHHhccCcceeeEEeEe
Confidence 45667899999999999999999997532 2469999987543 333456788999999999 899999999988
Q ss_pred ecC-CceEEEEEecCCCCHHHHHhhcC-----------------------------------------------------
Q 003963 573 TSP-QRLCIVTEFLPRGSLFRLLQRNT----------------------------------------------------- 598 (783)
Q Consensus 573 ~~~-~~~~lV~E~~~ggsL~~~L~~~~----------------------------------------------------- 598 (783)
... ..++++|||+++|+|.+++....
T Consensus 81 ~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (338)
T cd05102 81 TKPNGPLMVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIEAGQASVLFSRFQPSTSGSTNPP 160 (338)
T ss_pred cCCCCceEEEEecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccccccccccCCccccccccccCcccccc
Confidence 764 46899999999999999986532
Q ss_pred --------CcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCcccccc--cccccCCCC
Q 003963 599 --------TKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHET--YLTTKTGKG 668 (783)
Q Consensus 599 --------~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~~~--~~~~~~~~G 668 (783)
.++++..++.++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+++..... ........+
T Consensus 161 ~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~--ivHrDiKp~Nil~~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~ 238 (338)
T cd05102 161 QETDDLWKSPLTMEDLICYSFQVARGMEFLASRK--CIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGSARL 238 (338)
T ss_pred hhccccccCCCCHHHHHHHHHHHHHHHHHHHHCC--EECCCCccceEEEcCCCcEEEeecccccccccCcchhcccCCCC
Confidence 23677888999999999999999998 999999999999999999999999999754322 112223345
Q ss_pred CCcccCcccccCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCChHHHHHHhhcccccccCCCCCCHHHHHHHHHhhhhCC
Q 003963 669 TPQWMAPEVLRNEPSDEKSDVYSFGVILWELAT-EKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAAIVESCWHSDP 747 (783)
Q Consensus 669 t~~Y~aPE~~~~~~~s~~sDIwSLG~il~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~l~~LI~~cL~~dP 747 (783)
++.|+|||++.+..++.++|||||||+||||++ |..||........+............+..+++.+.+||.+||..||
T Consensus 239 ~~~y~aPE~~~~~~~~~~sDiwslG~il~el~~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp 318 (338)
T cd05102 239 PLKWMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQINEEFCQRLKDGTRMRAPENATPEIYRIMLACWQGDP 318 (338)
T ss_pred CccccCcHHhhcCCCCcccCHHHHHHHHHHHHhCCCCCCCCCCccHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHccCCh
Confidence 788999999999999999999999999999997 9999987654333322222333455677889999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHH
Q 003963 748 QCRPSFQELVDKLRDLQR 765 (783)
Q Consensus 748 ~~RPsa~ell~~L~~L~~ 765 (783)
.+||++.++++.|+++.+
T Consensus 319 ~~RPs~~el~~~l~~~~~ 336 (338)
T cd05102 319 KERPTFSALVEILGDLLQ 336 (338)
T ss_pred hhCcCHHHHHHHHHHHHh
Confidence 999999999999998765
No 26
>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1e-42 Score=343.49 Aligned_cols=258 Identities=28% Similarity=0.464 Sum_probs=230.2
Q ss_pred ccccceeEeeeeccCCcEEEEEEEEeCCc-eEEEEEEecccCCH-HHHHHHHHHHHHHHhCCCCceeeEeceeecCCceE
Q 003963 502 ILWEDLTIGEQIGQGSCGTVYHAVWYGSQ-DVAVKVFSRQEYSD-EVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLC 579 (783)
Q Consensus 502 ~~~~~y~i~~~LG~G~fG~Vy~a~~~~~~-~vAiK~i~~~~~~~-~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~ 579 (783)
...++|++++.||+|-||.||.|+.+.+. -||+|++.+..... ...+++.+|++|...|+||||+++|++|.+....|
T Consensus 19 ~~l~dfeigr~LgkgkFG~vYlarekks~~IvalKVlfKsqi~~~~v~~qlrREiEIqs~L~hpnilrlY~~fhd~~riy 98 (281)
T KOG0580|consen 19 WTLDDFEIGRPLGKGKFGNVYLAREKKSLFIVALKVLFKSQILKTQVEHQLRREIEIQSHLRHPNILRLYGYFHDSKRIY 98 (281)
T ss_pred cchhhccccccccCCccccEeEeeeccCCcEEEEeeeeHHHHHHhcchhhhhheeEeecccCCccHHhhhhheeccceeE
Confidence 44679999999999999999999987664 59999998776533 45578999999999999999999999999999999
Q ss_pred EEEEecCCCCHHHHHhhc-CCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCccccc
Q 003963 580 IVTEFLPRGSLFRLLQRN-TTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHE 658 (783)
Q Consensus 580 lV~E~~~ggsL~~~L~~~-~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~~ 658 (783)
+++||.++|+|+..|+.. ..++++.....++.|++.||.|+|.++ ||||||||+|+|++..+.+||+|||.+...+
T Consensus 99 LilEya~~gel~k~L~~~~~~~f~e~~~a~Yi~q~A~Al~y~h~k~--VIhRdiKpenlLlg~~~~lkiAdfGwsV~~p- 175 (281)
T KOG0580|consen 99 LILEYAPRGELYKDLQEGRMKRFDEQRAATYIKQLANALLYCHLKR--VIHRDIKPENLLLGSAGELKIADFGWSVHAP- 175 (281)
T ss_pred EEEEecCCchHHHHHHhcccccccccchhHHHHHHHHHHHHhccCC--cccCCCCHHHhccCCCCCeeccCCCceeecC-
Confidence 999999999999999843 345999999999999999999999988 9999999999999999999999999997655
Q ss_pred ccccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhcccccccCCCCCCHHHHHH
Q 003963 659 TYLTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAAI 738 (783)
Q Consensus 659 ~~~~~~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~l~~L 738 (783)
.....+.|||..|++||+..+..++..+|+|++|++.||++.|.+||......+.+..+.. .+..+|..++..++++
T Consensus 176 -~~kR~tlcgt~dyl~pEmv~~~~hd~~Vd~w~lgvl~yeflvg~ppFes~~~~etYkrI~k--~~~~~p~~is~~a~dl 252 (281)
T KOG0580|consen 176 -SNKRKTLCGTLDYLPPEMVEGRGHDKFVDLWSLGVLCYEFLVGLPPFESQSHSETYKRIRK--VDLKFPSTISGGAADL 252 (281)
T ss_pred -CCCceeeecccccCCHhhcCCCCccchhhHHHHHHHHHHHHhcCCchhhhhhHHHHHHHHH--ccccCCcccChhHHHH
Confidence 3455678999999999999999999999999999999999999999999988888888754 3566779999999999
Q ss_pred HHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhcC
Q 003963 739 VESCWHSDPQCRPSFQELVDKLRDLQRQYFQAS 771 (783)
Q Consensus 739 I~~cL~~dP~~RPsa~ell~~L~~L~~~~f~~~ 771 (783)
|.+||.++|.+|....++ +.|+|-.+.
T Consensus 253 I~~ll~~~p~~r~~l~~v------~~hpwI~a~ 279 (281)
T KOG0580|consen 253 ISRLLVKNPIERLALTEV------MDHPWIVAN 279 (281)
T ss_pred HHHHhccCccccccHHHH------hhhHHHHhc
Confidence 999999999999999999 567776543
No 27
>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.6e-43 Score=372.89 Aligned_cols=256 Identities=32% Similarity=0.534 Sum_probs=224.6
Q ss_pred cceeEeeeeccCCcEEEEEEEEeC-CceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEeceeecCCceEEEEE
Q 003963 505 EDLTIGEQIGQGSCGTVYHAVWYG-SQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIVTE 583 (783)
Q Consensus 505 ~~y~i~~~LG~G~fG~Vy~a~~~~-~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lV~E 583 (783)
..|+..+.||+|.||.||+|.+.. .+.||||++..+...+ ....+.+|+.+|..++++||.++|+.|..+..++++||
T Consensus 13 ~~~~~~~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~~~d-eIediqqei~~Ls~~~~~~it~yygsyl~g~~LwiiMe 91 (467)
T KOG0201|consen 13 LLYTKLELIGRGSFGEVYKAIDNKTKKVVAIKIIDLEEAED-EIEDIQQEISVLSQCDSPNITEYYGSYLKGTKLWIIME 91 (467)
T ss_pred cccccchhccccccceeeeeeeccccceEEEEEechhhcch-hhHHHHHHHHHHHhcCcchHHhhhhheeecccHHHHHH
Confidence 356777999999999999999865 4669999998776544 45678899999999999999999999999999999999
Q ss_pred ecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCcccccccccc
Q 003963 584 FLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETYLTT 663 (783)
Q Consensus 584 ~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~~~~ 663 (783)
||.||++.+.|+... .+.+..+..++++++.||.|||..+ .+|||||+.||||..+|.|||+|||.+..........
T Consensus 92 y~~gGsv~~lL~~~~-~~~E~~i~~ilre~l~~l~ylH~~~--kiHrDIKaanil~s~~g~vkl~DfgVa~ql~~~~~rr 168 (467)
T KOG0201|consen 92 YCGGGSVLDLLKSGN-ILDEFEIAVILREVLKGLDYLHSEK--KIHRDIKAANILLSESGDVKLADFGVAGQLTNTVKRR 168 (467)
T ss_pred HhcCcchhhhhccCC-CCccceeeeehHHHHHHhhhhhhcc--eecccccccceeEeccCcEEEEecceeeeeechhhcc
Confidence 999999999997643 4588888899999999999999998 9999999999999999999999999998777766666
Q ss_pred cCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhcccccccCCCCCCHHHHHHHHHhh
Q 003963 664 KTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAAIVESCW 743 (783)
Q Consensus 664 ~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~l~~LI~~cL 743 (783)
.+++|||.|||||++.+..|+.++||||||++.+||++|.+||....++.++..|. ....+.+...+++.+++||..||
T Consensus 169 ~tfvGTPfwMAPEVI~~~~Y~~KADIWSLGITaiEla~GePP~s~~hPmrvlflIp-k~~PP~L~~~~S~~~kEFV~~CL 247 (467)
T KOG0201|consen 169 KTFVGTPFWMAPEVIKQSGYDTKADIWSLGITAIELAKGEPPHSKLHPMRVLFLIP-KSAPPRLDGDFSPPFKEFVEACL 247 (467)
T ss_pred ccccccccccchhhhccccccchhhhhhhhHHHHHHhcCCCCCcccCcceEEEecc-CCCCCccccccCHHHHHHHHHHh
Confidence 88999999999999999999999999999999999999999999999876654443 22334445578999999999999
Q ss_pred hhCCCCCCCHHHHHHHHHHHHHHHhhcC
Q 003963 744 HSDPQCRPSFQELVDKLRDLQRQYFQAS 771 (783)
Q Consensus 744 ~~dP~~RPsa~ell~~L~~L~~~~f~~~ 771 (783)
.+||+.||+|.++ |+|+|.+..
T Consensus 248 ~k~P~~RpsA~~L------LKh~FIk~a 269 (467)
T KOG0201|consen 248 DKNPEFRPSAKEL------LKHKFIKRA 269 (467)
T ss_pred hcCcccCcCHHHH------hhhHHHHhc
Confidence 9999999999999 567777653
No 28
>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt
Probab=100.00 E-value=1.8e-41 Score=364.26 Aligned_cols=252 Identities=24% Similarity=0.411 Sum_probs=219.9
Q ss_pred cceeEeeeeccCCcEEEEEEEEeC-CceEEEEEEecccCC-HHHHHHHHHHHHHHHhCCCCceeeEeceeecCCceEEEE
Q 003963 505 EDLTIGEQIGQGSCGTVYHAVWYG-SQDVAVKVFSRQEYS-DEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIVT 582 (783)
Q Consensus 505 ~~y~i~~~LG~G~fG~Vy~a~~~~-~~~vAiK~i~~~~~~-~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lV~ 582 (783)
++|++.++||+|+||.||+|.+.. ++.||||++...... ......+.+|+.+++.++||||+++++++.+...+|+||
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 80 (291)
T cd05612 1 DDLERIKTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVSHPFIIRLFWTEHDQRFLYMLM 80 (291)
T ss_pred CCceeeeeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhCCCCcHhhhHhhhccCCeEEEEE
Confidence 478999999999999999999864 567999998764432 234567889999999999999999999999999999999
Q ss_pred EecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCccccccccc
Q 003963 583 EFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETYLT 662 (783)
Q Consensus 583 E~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~~~ 662 (783)
||+++++|.+++... ..+++..++.++.||+.||+|||+++ |+||||||+|||++.++.+||+|||++......
T Consensus 81 e~~~~~~L~~~~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~--i~H~dlkp~NIli~~~~~~kl~Dfg~~~~~~~~--- 154 (291)
T cd05612 81 EYVPGGELFSYLRNS-GRFSNSTGLFYASEIVCALEYLHSKE--IVYRDLKPENILLDKEGHIKLTDFGFAKKLRDR--- 154 (291)
T ss_pred eCCCCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCC--eeecCCCHHHeEECCCCCEEEEecCcchhccCC---
Confidence 999999999999764 46889999999999999999999998 999999999999999999999999998765432
Q ss_pred ccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhcccccccCCCCCCHHHHHHHHHh
Q 003963 663 TKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAAIVESC 742 (783)
Q Consensus 663 ~~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~l~~LI~~c 742 (783)
....+|++.|+|||++.+..++.++|||||||++|+|++|..||...+.......+. .....++..+++.+.+||.+|
T Consensus 155 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~i~--~~~~~~~~~~~~~~~~li~~~ 232 (291)
T cd05612 155 TWTLCGTPEYLAPEVIQSKGHNKAVDWWALGILIYEMLVGYPPFFDDNPFGIYEKIL--AGKLEFPRHLDLYAKDLIKKL 232 (291)
T ss_pred cccccCChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH--hCCcCCCccCCHHHHHHHHHH
Confidence 224568999999999999999999999999999999999999999888776666553 334567778899999999999
Q ss_pred hhhCCCCCCC-----HHHHHHHHHHHHHHHhhc
Q 003963 743 WHSDPQCRPS-----FQELVDKLRDLQRQYFQA 770 (783)
Q Consensus 743 L~~dP~~RPs-----a~ell~~L~~L~~~~f~~ 770 (783)
|+.||.+||+ +.++ +.|+||+.
T Consensus 233 l~~dp~~R~~~~~~~~~~~------l~h~~~~~ 259 (291)
T cd05612 233 LVVDRTRRLGNMKNGADDV------KNHRWFKS 259 (291)
T ss_pred cCCCHHHccCCccCCHHHH------hcCccccC
Confidence 9999999995 8888 67899864
No 29
>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be
Probab=100.00 E-value=2e-41 Score=369.61 Aligned_cols=249 Identities=25% Similarity=0.484 Sum_probs=215.5
Q ss_pred eeeccCCcEEEEEEEEeC-CceEEEEEEecccC-CHHHHHHHHHHHHHHHhCCCCceeeEeceeecCCceEEEEEecCCC
Q 003963 511 EQIGQGSCGTVYHAVWYG-SQDVAVKVFSRQEY-SDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIVTEFLPRG 588 (783)
Q Consensus 511 ~~LG~G~fG~Vy~a~~~~-~~~vAiK~i~~~~~-~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lV~E~~~gg 588 (783)
+.||+|+||.||++.+.. ++.||||++..... .......+.+|+.+++.++||||+++++++...+.+|+||||++++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~~~~~ 80 (323)
T cd05571 1 KLLGKGTFGKVILVREKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNTRHPFLTALKYSFQTHDRLCFVMEYANGG 80 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCCEEEEEEcCCEEEEEEeCCCCC
Confidence 469999999999999754 56799999986543 2344566788999999999999999999999999999999999999
Q ss_pred CHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCcccccccccccCCCC
Q 003963 589 SLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETYLTTKTGKG 668 (783)
Q Consensus 589 sL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~~G 668 (783)
+|.+++... ..+++..+..++.||+.||+|||++| |+||||||+||||+.++.+||+|||+++............+|
T Consensus 81 ~L~~~l~~~-~~~~~~~~~~~~~qi~~~L~~lH~~~--ivHrDlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~~~~~~g 157 (323)
T cd05571 81 ELFFHLSRE-RVFSEDRARFYGAEIVSALGYLHSCD--VVYRDLKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCG 157 (323)
T ss_pred cHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHhCC--eEeCCCCHHHEEECCCCCEEEeeCCCCcccccCCCcccceec
Confidence 999999764 46899999999999999999999998 999999999999999999999999998754333333345679
Q ss_pred CCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhcccccccCCCCCCHHHHHHHHHhhhhCCC
Q 003963 669 TPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAAIVESCWHSDPQ 748 (783)
Q Consensus 669 t~~Y~aPE~~~~~~~s~~sDIwSLG~il~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~l~~LI~~cL~~dP~ 748 (783)
|+.|+|||++.+..++.++|||||||++|+|++|..||...+.......+. .....+|..+++++.+||.+||..||.
T Consensus 158 t~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~~~~~--~~~~~~p~~~~~~~~~li~~~L~~dP~ 235 (323)
T cd05571 158 TPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELIL--MEEIRFPRTLSPEAKSLLAGLLKKDPK 235 (323)
T ss_pred CccccChhhhcCCCCCccccCcccchhhhhhhcCCCCCCCCCHHHHHHHHH--cCCCCCCCCCCHHHHHHHHHHccCCHH
Confidence 999999999999999999999999999999999999998877766655542 345567888999999999999999999
Q ss_pred CCC-----CHHHHHHHHHHHHHHHhhc
Q 003963 749 CRP-----SFQELVDKLRDLQRQYFQA 770 (783)
Q Consensus 749 ~RP-----sa~ell~~L~~L~~~~f~~ 770 (783)
+|| ++.++ +.|+||+.
T Consensus 236 ~R~~~~~~~~~~l------l~h~~f~~ 256 (323)
T cd05571 236 QRLGGGPEDAKEI------MEHRFFAS 256 (323)
T ss_pred HcCCCCCCCHHHH------HcCCCcCC
Confidence 999 79998 67888855
No 30
>PTZ00263 protein kinase A catalytic subunit; Provisional
Probab=100.00 E-value=2.9e-41 Score=369.46 Aligned_cols=254 Identities=28% Similarity=0.454 Sum_probs=221.7
Q ss_pred cccceeEeeeeccCCcEEEEEEEEeC-CceEEEEEEecccCC-HHHHHHHHHHHHHHHhCCCCceeeEeceeecCCceEE
Q 003963 503 LWEDLTIGEQIGQGSCGTVYHAVWYG-SQDVAVKVFSRQEYS-DEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCI 580 (783)
Q Consensus 503 ~~~~y~i~~~LG~G~fG~Vy~a~~~~-~~~vAiK~i~~~~~~-~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~l 580 (783)
..++|++.+.||+|+||.||+|.+.. ++.||||++...... ......+.+|+.+++.++||||+++++++..++.+|+
T Consensus 16 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~l 95 (329)
T PTZ00263 16 KLSDFEMGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMELSHPFIVNMMCSFQDENRVYF 95 (329)
T ss_pred CchheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCcEEEEEEcCCEEEE
Confidence 35789999999999999999999865 567999999765432 2445678899999999999999999999999999999
Q ss_pred EEEecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCccccccc
Q 003963 581 VTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETY 660 (783)
Q Consensus 581 V~E~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~ 660 (783)
||||+++++|.+++... ..+++..+..++.||+.||+|||+++ |+||||||+||||+.++.+||+|||++......
T Consensus 96 v~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~aL~~LH~~~--ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~- 171 (329)
T PTZ00263 96 LLEFVVGGELFTHLRKA-GRFPNDVAKFYHAELVLAFEYLHSKD--IIYRDLKPENLLLDNKGHVKVTDFGFAKKVPDR- 171 (329)
T ss_pred EEcCCCCChHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCC--eeecCCCHHHEEECCCCCEEEeeccCceEcCCC-
Confidence 99999999999999764 46889999999999999999999998 999999999999999999999999999765432
Q ss_pred ccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhcccccccCCCCCCHHHHHHHH
Q 003963 661 LTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAAIVE 740 (783)
Q Consensus 661 ~~~~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~l~~LI~ 740 (783)
.....||+.|+|||++.+..++.++|||||||++|+|++|..||...+.......+. .....+|..++..+.+||.
T Consensus 172 --~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~i~--~~~~~~p~~~~~~~~~li~ 247 (329)
T PTZ00263 172 --TFTLCGTPEYLAPEVIQSKGHGKAVDWWTMGVLLYEFIAGYPPFFDDTPFRIYEKIL--AGRLKFPNWFDGRARDLVK 247 (329)
T ss_pred --cceecCChhhcCHHHHcCCCCCCcceeechHHHHHHHHcCCCCCCCCCHHHHHHHHh--cCCcCCCCCCCHHHHHHHH
Confidence 224578999999999999999999999999999999999999998887776666553 3456677889999999999
Q ss_pred HhhhhCCCCCCC-----HHHHHHHHHHHHHHHhhc
Q 003963 741 SCWHSDPQCRPS-----FQELVDKLRDLQRQYFQA 770 (783)
Q Consensus 741 ~cL~~dP~~RPs-----a~ell~~L~~L~~~~f~~ 770 (783)
+||+.||.+||+ +.++ +.|+||+.
T Consensus 248 ~~L~~dP~~R~~~~~~~~~~l------l~hp~f~~ 276 (329)
T PTZ00263 248 GLLQTDHTKRLGTLKGGVADV------KNHPYFHG 276 (329)
T ss_pred HHhhcCHHHcCCCCCCCHHHH------hcCCccCC
Confidence 999999999996 6787 67788854
No 31
>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]
Probab=100.00 E-value=1.7e-42 Score=374.00 Aligned_cols=251 Identities=35% Similarity=0.645 Sum_probs=224.2
Q ss_pred cccccccceeEeeeeccCCcEEEEEEEEeCCceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEeceeecCCce
Q 003963 499 DYEILWEDLTIGEQIGQGSCGTVYHAVWYGSQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRL 578 (783)
Q Consensus 499 ~~e~~~~~y~i~~~LG~G~fG~Vy~a~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~ 578 (783)
.||+.++...-++-||.|+.|.||+|+.+ ++.||||+++..+ ..+|.-|++|+||||+.|.|+|.....+
T Consensus 118 ~WeiPFe~IsELeWlGSGaQGAVF~Grl~-netVAVKKV~elk---------ETdIKHLRkLkH~NII~FkGVCtqsPcy 187 (904)
T KOG4721|consen 118 LWEIPFEEISELEWLGSGAQGAVFLGRLH-NETVAVKKVRELK---------ETDIKHLRKLKHPNIITFKGVCTQSPCY 187 (904)
T ss_pred hccCCHHHhhhhhhhccCcccceeeeecc-CceehhHHHhhhh---------hhhHHHHHhccCcceeeEeeeecCCcee
Confidence 56788888888889999999999999976 4589999875322 2478889999999999999999999999
Q ss_pred EEEEEecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCccccc
Q 003963 579 CIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHE 658 (783)
Q Consensus 579 ~lV~E~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~~ 658 (783)
|||||||..|.|+..|+. +.++.......|..+|+.||+|||.+. |||||||.-||||+.+..|||+|||.++...+
T Consensus 188 CIiMEfCa~GqL~~VLka-~~~itp~llv~Wsk~IA~GM~YLH~hK--IIHRDLKSPNiLIs~~d~VKIsDFGTS~e~~~ 264 (904)
T KOG4721|consen 188 CIIMEFCAQGQLYEVLKA-GRPITPSLLVDWSKGIAGGMNYLHLHK--IIHRDLKSPNILISYDDVVKISDFGTSKELSD 264 (904)
T ss_pred EEeeeccccccHHHHHhc-cCccCHHHHHHHHHHhhhhhHHHHHhh--HhhhccCCCceEeeccceEEeccccchHhhhh
Confidence 999999999999999976 456888889999999999999999998 99999999999999999999999999987665
Q ss_pred ccccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhcccccccCCCCCCHHHHHH
Q 003963 659 TYLTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAAI 738 (783)
Q Consensus 659 ~~~~~~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~l~~L 738 (783)
. .+...++||-.|||||++.+.+.+.|+|||||||||||||||..||.+.+...++.-+..-...+++|..+|+.|+=|
T Consensus 265 ~-STkMSFaGTVaWMAPEvIrnePcsEKVDIwSfGVVLWEmLT~EiPYkdVdssAIIwGVGsNsL~LpvPstcP~GfklL 343 (904)
T KOG4721|consen 265 K-STKMSFAGTVAWMAPEVIRNEPCSEKVDIWSFGVVLWEMLTGEIPYKDVDSSAIIWGVGSNSLHLPVPSTCPDGFKLL 343 (904)
T ss_pred h-hhhhhhhhhHhhhCHHHhhcCCcccccceehhHHHHHHHHhcCCCccccchheeEEeccCCcccccCcccCchHHHHH
Confidence 4 455678999999999999999999999999999999999999999999887766655554445678899999999999
Q ss_pred HHHhhhhCCCCCCCHHHHHHHHHHH
Q 003963 739 VESCWHSDPQCRPSFQELVDKLRDL 763 (783)
Q Consensus 739 I~~cL~~dP~~RPsa~ell~~L~~L 763 (783)
|+.||+.+|..||++.+|+.+|+-.
T Consensus 344 ~Kqcw~sKpRNRPSFrqil~HldIa 368 (904)
T KOG4721|consen 344 LKQCWNSKPRNRPSFRQILLHLDIA 368 (904)
T ss_pred HHHHHhcCCCCCccHHHHHHHHhhc
Confidence 9999999999999999999998743
No 32
>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=1e-41 Score=371.13 Aligned_cols=253 Identities=28% Similarity=0.464 Sum_probs=231.8
Q ss_pred ccceeEeeeeccCCcEEEEEEEEeCC-ceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEeceeecCCc-eEEE
Q 003963 504 WEDLTIGEQIGQGSCGTVYHAVWYGS-QDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQR-LCIV 581 (783)
Q Consensus 504 ~~~y~i~~~LG~G~fG~Vy~a~~~~~-~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~-~~lV 581 (783)
.++|.++++||+|+||.+++++++.. ..|++|.+..............+|+.++++++|||||.+++.|+.++. +|||
T Consensus 3 m~~Ye~~~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~~t~~~r~~A~~E~~lis~~~hP~iv~y~ds~~~~~~~l~Iv 82 (426)
T KOG0589|consen 3 MDNYEVLRQVGRGAFGSALLVRHKSDDKLYVLKKINLEKLTEPERRSAIQEMDLLSKLLHPNIVEYKDSFEEDGQLLCIV 82 (426)
T ss_pred cchhhhhhhcCccccchhhhhhhccCCceEEEEEEeccccCchhhHHHHHHHHHHHhccCCCeeeeccchhcCCceEEEE
Confidence 36899999999999999999998754 579999998888777666788899999999999999999999999888 9999
Q ss_pred EEecCCCCHHHHHhhcC-CcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCccccccc
Q 003963 582 TEFLPRGSLFRLLQRNT-TKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETY 660 (783)
Q Consensus 582 ~E~~~ggsL~~~L~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~ 660 (783)
|+||+||+|.+.+...+ ..++++.++.|+.||+.||.|||+++ |+|||||+.||+++.++.|+|.|||+|+......
T Consensus 83 m~Y~eGg~l~~~i~~~k~~~f~E~~i~~~~~Q~~~av~ylH~~~--iLHRDlK~~Nifltk~~~VkLgDfGlaK~l~~~~ 160 (426)
T KOG0589|consen 83 MEYCEGGDLAQLIKEQKGVLFPEERILKWFVQILLAVNYLHENR--VLHRDLKCANIFLTKDKKVKLGDFGLAKILNPED 160 (426)
T ss_pred EeecCCCCHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHhhh--hhcccchhhhhhccccCceeecchhhhhhcCCch
Confidence 99999999999997654 67999999999999999999999887 9999999999999999999999999999888776
Q ss_pred ccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhcccccccCCCCCCHHHHHHHH
Q 003963 661 LTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAAIVE 740 (783)
Q Consensus 661 ~~~~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~l~~LI~ 740 (783)
....+.+|||.||+||++.+.+|+.++|||||||++|||++-+++|...+...+...+.... ..++|..++.+++.+|+
T Consensus 161 ~~a~tvvGTp~YmcPEil~d~pYn~KSDiWsLGC~~yEm~~lk~aF~a~~m~~Li~ki~~~~-~~Plp~~ys~el~~lv~ 239 (426)
T KOG0589|consen 161 SLASTVVGTPYYMCPEILSDIPYNEKSDIWSLGCCLYEMCTLKPAFKASNMSELILKINRGL-YSPLPSMYSSELRSLVK 239 (426)
T ss_pred hhhheecCCCcccCHHHhCCCCCCccCcchhhcchHHHHHhcccccCccchHHHHHHHhhcc-CCCCCccccHHHHHHHH
Confidence 56678899999999999999999999999999999999999999999999888877764333 56788899999999999
Q ss_pred HhhhhCCCCCCCHHHHHHH
Q 003963 741 SCWHSDPQCRPSFQELVDK 759 (783)
Q Consensus 741 ~cL~~dP~~RPsa~ell~~ 759 (783)
.||.++|..||++.+||.+
T Consensus 240 ~~l~~~P~~RPsa~~LL~~ 258 (426)
T KOG0589|consen 240 SMLRKNPEHRPSALELLRR 258 (426)
T ss_pred HHhhcCCccCCCHHHHhhC
Confidence 9999999999999999876
No 33
>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional
Probab=100.00 E-value=5.2e-41 Score=369.23 Aligned_cols=257 Identities=25% Similarity=0.417 Sum_probs=222.9
Q ss_pred cccccceeEeeeeccCCcEEEEEEEEeCC--ceEEEEEEecccC-CHHHHHHHHHHHHHHHhCCCCceeeEeceeecCCc
Q 003963 501 EILWEDLTIGEQIGQGSCGTVYHAVWYGS--QDVAVKVFSRQEY-SDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQR 577 (783)
Q Consensus 501 e~~~~~y~i~~~LG~G~fG~Vy~a~~~~~--~~vAiK~i~~~~~-~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~ 577 (783)
....++|++.++||+|+||.||+|.+... ..||+|++..... .......+.+|+.+++.++|||||++++++...+.
T Consensus 26 ~~~~~~y~~~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~ 105 (340)
T PTZ00426 26 KMKYEDFNFIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYINHPFCVNLYGSFKDESY 105 (340)
T ss_pred CCChhhcEEEEEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCCcceEEEEEeCCE
Confidence 44567899999999999999999987653 4799999876543 23445678899999999999999999999999999
Q ss_pred eEEEEEecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCcccc
Q 003963 578 LCIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKH 657 (783)
Q Consensus 578 ~~lV~E~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~ 657 (783)
+|+||||+++|+|.+++... ..+++..+..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||++....
T Consensus 106 ~~lv~Ey~~~g~L~~~i~~~-~~~~~~~~~~~~~qi~~aL~~LH~~~--ivHrDLkp~NILl~~~~~ikL~DFG~a~~~~ 182 (340)
T PTZ00426 106 LYLVLEFVIGGEFFTFLRRN-KRFPNDVGCFYAAQIVLIFEYLQSLN--IVYRDLKPENLLLDKDGFIKMTDFGFAKVVD 182 (340)
T ss_pred EEEEEeCCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCC--eEccCCCHHHEEECCCCCEEEecCCCCeecC
Confidence 99999999999999999764 35899999999999999999999998 9999999999999999999999999997654
Q ss_pred cccccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhcccccccCCCCCCHHHHH
Q 003963 658 ETYLTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAA 737 (783)
Q Consensus 658 ~~~~~~~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~l~~ 737 (783)
.. .....||+.|+|||++.+..++.++|||||||++|+|++|.+||...+.......+. .....+|..+++.+.+
T Consensus 183 ~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~~~i~--~~~~~~p~~~~~~~~~ 257 (340)
T PTZ00426 183 TR---TYTLCGTPEYIAPEILLNVGHGKAADWWTLGIFIYEILVGCPPFYANEPLLIYQKIL--EGIIYFPKFLDNNCKH 257 (340)
T ss_pred CC---cceecCChhhcCHHHHhCCCCCccccccchhhHHHHHhcCCCCCCCCCHHHHHHHHh--cCCCCCCCCCCHHHHH
Confidence 32 234578999999999999989999999999999999999999999887766665553 3345677889999999
Q ss_pred HHHHhhhhCCCCCC-----CHHHHHHHHHHHHHHHhhcC
Q 003963 738 IVESCWHSDPQCRP-----SFQELVDKLRDLQRQYFQAS 771 (783)
Q Consensus 738 LI~~cL~~dP~~RP-----sa~ell~~L~~L~~~~f~~~ 771 (783)
+|++||+.||.+|+ ++.++ +.|+||+..
T Consensus 258 li~~~l~~dp~~R~~~~~~~~~~~------~~hp~f~~~ 290 (340)
T PTZ00426 258 LMKKLLSHDLTKRYGNLKKGAQNV------KEHPWFGNI 290 (340)
T ss_pred HHHHHcccCHHHcCCCCCCCHHHH------HcCCCcCCC
Confidence 99999999999995 89988 678888654
No 34
>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=2.2e-41 Score=353.03 Aligned_cols=251 Identities=24% Similarity=0.453 Sum_probs=222.9
Q ss_pred ccccceeEeeeeccCCcEEEEEEEE-eCCceEEEEEEecccCCH-HHHHHHHHHHHHHHhCCCCceeeEeceeecCCceE
Q 003963 502 ILWEDLTIGEQIGQGSCGTVYHAVW-YGSQDVAVKVFSRQEYSD-EVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLC 579 (783)
Q Consensus 502 ~~~~~y~i~~~LG~G~fG~Vy~a~~-~~~~~vAiK~i~~~~~~~-~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~ 579 (783)
....+|++.+.||+|+||+|-+|+. ..++.||||.+++..+.+ .-+-.+++|++||..|+||||+.+|.+|+..+.++
T Consensus 50 nlkHRyE~~etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsLNHPhII~IyEVFENkdKIv 129 (668)
T KOG0611|consen 50 NLKHRYEITETLGKGTYGKVKLAYEHKSGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSLNHPHIIQIYEVFENKDKIV 129 (668)
T ss_pred chhhHHHHHHHhcCCcccceeehhhccCCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhcCCCceeehhhhhcCCceEE
Confidence 3456899999999999999999986 567889999999887654 44567899999999999999999999999999999
Q ss_pred EEEEecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCcccccc
Q 003963 580 IVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHET 659 (783)
Q Consensus 580 lV~E~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~~~ 659 (783)
|||||..+|.|++|+... ..+++..+..+++||+.|+.|||.++ ++|||||.+|||+|.++++||+|||++.++...
T Consensus 130 ivMEYaS~GeLYDYiSer-~~LsErEaRhfFRQIvSAVhYCHknr--VvHRDLKLENILLD~N~NiKIADFGLSNly~~~ 206 (668)
T KOG0611|consen 130 IVMEYASGGELYDYISER-GSLSEREARHFFRQIVSAVHYCHKNR--VVHRDLKLENILLDQNNNIKIADFGLSNLYADK 206 (668)
T ss_pred EEEEecCCccHHHHHHHh-ccccHHHHHHHHHHHHHHHHHHhhcc--ceecccchhheeecCCCCeeeeccchhhhhccc
Confidence 999999999999999874 46999999999999999999999998 999999999999999999999999999887765
Q ss_pred cccccCCCCCCcccCcccccCCCC-CchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhcccccccCCCCCCHHHHHH
Q 003963 660 YLTTKTGKGTPQWMAPEVLRNEPS-DEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAAI 738 (783)
Q Consensus 660 ~~~~~~~~Gt~~Y~aPE~~~~~~~-s~~sDIwSLG~il~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~l~~L 738 (783)
. ..+++||+|-|.+||++.|.+| ++.+|.||||++||-|+.|..||++.+...+...|....++ - +.-+....-|
T Consensus 207 k-fLqTFCGSPLYASPEIvNG~PY~GPEVDsWsLGvLLYtLVyGtMPFDG~Dhk~lvrQIs~GaYr--E-P~~PSdA~gL 282 (668)
T KOG0611|consen 207 K-FLQTFCGSPLYASPEIVNGTPYKGPEVDSWSLGVLLYTLVYGTMPFDGRDHKRLVRQISRGAYR--E-PETPSDASGL 282 (668)
T ss_pred c-HHHHhcCCcccCCccccCCCCCCCCccchhhHHHHHHHHhhcccccCCchHHHHHHHhhccccc--C-CCCCchHHHH
Confidence 3 4458899999999999999998 67899999999999999999999999988888777543332 2 2345677889
Q ss_pred HHHhhhhCCCCCCCHHHHHHH
Q 003963 739 VESCWHSDPQCRPSFQELVDK 759 (783)
Q Consensus 739 I~~cL~~dP~~RPsa~ell~~ 759 (783)
|++||..+|++|.|+.+|..+
T Consensus 283 IRwmLmVNP~RRATieDiAsH 303 (668)
T KOG0611|consen 283 IRWMLMVNPERRATIEDIASH 303 (668)
T ss_pred HHHHHhcCcccchhHHHHhhh
Confidence 999999999999999999654
No 35
>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i
Probab=100.00 E-value=3.3e-40 Score=353.28 Aligned_cols=257 Identities=21% Similarity=0.292 Sum_probs=214.2
Q ss_pred ceeEeeeeccCCcEEEEEEEEeC-CceEEEEEEecccCCH-HHHHHHHHHHHHHHhCCCCceeeEeceeecCCceEEEEE
Q 003963 506 DLTIGEQIGQGSCGTVYHAVWYG-SQDVAVKVFSRQEYSD-EVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIVTE 583 (783)
Q Consensus 506 ~y~i~~~LG~G~fG~Vy~a~~~~-~~~vAiK~i~~~~~~~-~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lV~E 583 (783)
.|++.+.||+|+||.||++.+.. ++.||+|++....... .....+.+|+.+++.++|+||+++++++...+.+++|||
T Consensus 1 ~f~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~iv~~~~~~~~~~~~~lv~e 80 (285)
T cd05631 1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKVNSRFVVSLAYAYETKDALCLVLT 80 (285)
T ss_pred CceEEEEEecCCCEEEEEEEEecCCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhcCCCcEEEEEEEEccCCeEEEEEE
Confidence 37889999999999999999754 5789999987654332 233467789999999999999999999999999999999
Q ss_pred ecCCCCHHHHHhhc-CCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCccccccccc
Q 003963 584 FLPRGSLFRLLQRN-TTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETYLT 662 (783)
Q Consensus 584 ~~~ggsL~~~L~~~-~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~~~ 662 (783)
|+++|+|..++... ...+++..++.++.||+.||+|||+.+ |+||||||+|||++.++.++|+|||++....... .
T Consensus 81 ~~~~g~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~--iiH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~~-~ 157 (285)
T cd05631 81 IMNGGDLKFHIYNMGNPGFDEQRAIFYAAELCCGLEDLQRER--IVYRDLKPENILLDDRGHIRISDLGLAVQIPEGE-T 157 (285)
T ss_pred ecCCCcHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhCC--EEeCCCCHHHEEECCCCCEEEeeCCCcEEcCCCC-e
Confidence 99999999887543 345899999999999999999999998 9999999999999999999999999987654322 2
Q ss_pred ccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhh--cccccccCCCCCCHHHHHHHH
Q 003963 663 TKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVG--FMNQRLEIPKDVDPRWAAIVE 740 (783)
Q Consensus 663 ~~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~elltG~~Pf~~~~~~~~~~~i~--~~~~~~~~~~~~s~~l~~LI~ 740 (783)
.....|++.|+|||++.+..++.++|||||||++|+|++|+.||...........+. .......++..+++++.+||.
T Consensus 158 ~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~ 237 (285)
T cd05631 158 VRGRVGTVGYMAPEVINNEKYTFSPDWWGLGCLIYEMIQGQSPFRKRKERVKREEVDRRVKEDQEEYSEKFSEDAKSICR 237 (285)
T ss_pred ecCCCCCCCccCHhhhcCCCCCcccCchhHHHHHHHHHhCCCCCCCCCcchhHHHHHHHhhcccccCCccCCHHHHHHHH
Confidence 234578999999999999999999999999999999999999998665432211111 122344566778999999999
Q ss_pred HhhhhCCCCCCC-----HHHHHHHHHHHHHHHhhcC
Q 003963 741 SCWHSDPQCRPS-----FQELVDKLRDLQRQYFQAS 771 (783)
Q Consensus 741 ~cL~~dP~~RPs-----a~ell~~L~~L~~~~f~~~ 771 (783)
+||..||.+||+ +.++ ++|+||+.+
T Consensus 238 ~~l~~~P~~R~~~~~~~~~~~------~~h~~~~~~ 267 (285)
T cd05631 238 MLLTKNPKERLGCRGNGAAGV------KQHPIFKNI 267 (285)
T ss_pred HHhhcCHHHhcCCCCCCHHHH------hcCHhhcCC
Confidence 999999999997 7888 678888665
No 36
>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=6.3e-41 Score=357.44 Aligned_cols=250 Identities=26% Similarity=0.434 Sum_probs=209.5
Q ss_pred ccccceeEeeeeccCCcEEEEEEEEeC-CceEEEEEEecccCCH------------HHHHHHHHHHHHHHhCCCCceeeE
Q 003963 502 ILWEDLTIGEQIGQGSCGTVYHAVWYG-SQDVAVKVFSRQEYSD------------EVIHSFRQEVSLMKRLRHPNVLLF 568 (783)
Q Consensus 502 ~~~~~y~i~~~LG~G~fG~Vy~a~~~~-~~~vAiK~i~~~~~~~------------~~~~~~~~Ei~il~~l~HpnIv~l 568 (783)
...++|++++.||+|.||.|.+|++.. ++.||||++.+..... .-.+...+||.+|++|+|||||+|
T Consensus 94 k~lNqy~l~~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~H~nVV~L 173 (576)
T KOG0585|consen 94 KQLNQYELIKEIGSGQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLHHPNVVKL 173 (576)
T ss_pred eehhheehhhhhcCCccceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcCCcCeeEE
Confidence 456899999999999999999999865 4679999997653211 123578899999999999999999
Q ss_pred eceeecC--CceEEEEEecCCCCHHHHHhhcCCc-chHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcE
Q 003963 569 MGAVTSP--QRLCIVTEFLPRGSLFRLLQRNTTK-LDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTV 645 (783)
Q Consensus 569 ~~~~~~~--~~~~lV~E~~~ggsL~~~L~~~~~~-l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~v 645 (783)
+++..++ +.+|||+|||..|.+...=. ..+ +++.++++++++++.||.|||.+| ||||||||+|+||+.+|+|
T Consensus 174 iEvLDDP~s~~~YlVley~s~G~v~w~p~--d~~els~~~Ar~ylrDvv~GLEYLH~Qg--iiHRDIKPsNLLl~~~g~V 249 (576)
T KOG0585|consen 174 IEVLDDPESDKLYLVLEYCSKGEVKWCPP--DKPELSEQQARKYLRDVVLGLEYLHYQG--IIHRDIKPSNLLLSSDGTV 249 (576)
T ss_pred EEeecCcccCceEEEEEeccCCccccCCC--CcccccHHHHHHHHHHHHHHHHHHHhcC--eeccccchhheEEcCCCcE
Confidence 9999876 57999999999887754322 233 899999999999999999999999 9999999999999999999
Q ss_pred EEEecCCCccccccc-----ccccCCCCCCcccCcccccCCC----CCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHH
Q 003963 646 KVGDFGLSRLKHETY-----LTTKTGKGTPQWMAPEVLRNEP----SDEKSDVYSFGVILWELATEKIPWDNLNSMQVIG 716 (783)
Q Consensus 646 kL~DFGla~~~~~~~-----~~~~~~~Gt~~Y~aPE~~~~~~----~s~~sDIwSLG~il~elltG~~Pf~~~~~~~~~~ 716 (783)
||+|||.+....... ......+|||.|+|||.+.+.. .+.+.|||||||+||.|+.|++||-+....+++.
T Consensus 250 KIsDFGVs~~~~~~~~~~~d~~L~~tvGTPAF~APE~c~~~~~~~~~g~a~DiWalGVTLYCllfG~~PF~~~~~~~l~~ 329 (576)
T KOG0585|consen 250 KISDFGVSNEFPQGSDEGSDDQLSRTVGTPAFFAPELCSGGNSFSYSGFALDIWALGVTLYCLLFGQLPFFDDFELELFD 329 (576)
T ss_pred EeeccceeeecccCCccccHHHHhhcCCCccccchHhhcCCCCccccchhhhhhhhhhhHHHhhhccCCcccchHHHHHH
Confidence 999999987653321 1222357999999999987733 3678999999999999999999999988888888
Q ss_pred HhhcccccccCCC--CCCHHHHHHHHHhhhhCCCCCCCHHHHH
Q 003963 717 AVGFMNQRLEIPK--DVDPRWAAIVESCWHSDPQCRPSFQELV 757 (783)
Q Consensus 717 ~i~~~~~~~~~~~--~~s~~l~~LI~~cL~~dP~~RPsa~ell 757 (783)
.|. +..+.+|. .+...+++||.+||.+||++|.+..+|.
T Consensus 330 KIv--n~pL~fP~~pe~~e~~kDli~~lL~KdP~~Ri~l~~ik 370 (576)
T KOG0585|consen 330 KIV--NDPLEFPENPEINEDLKDLIKRLLEKDPEQRITLPDIK 370 (576)
T ss_pred HHh--cCcccCCCcccccHHHHHHHHHHhhcChhheeehhhhe
Confidence 874 44455554 4799999999999999999999999994
No 37
>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.
Probab=100.00 E-value=1.7e-40 Score=363.67 Aligned_cols=255 Identities=23% Similarity=0.353 Sum_probs=218.3
Q ss_pred cceeEeeeeccCCcEEEEEEEEeC-CceEEEEEEecccCC-HHHHHHHHHHHHHHHhCCCCceeeEeceeecCCceEEEE
Q 003963 505 EDLTIGEQIGQGSCGTVYHAVWYG-SQDVAVKVFSRQEYS-DEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIVT 582 (783)
Q Consensus 505 ~~y~i~~~LG~G~fG~Vy~a~~~~-~~~vAiK~i~~~~~~-~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lV~ 582 (783)
++|++.++||+|+||.||+|.+.. ++.||||++...... ......+.+|+.++..++||||+++++++...+.+|+||
T Consensus 1 ~~y~~~~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~ 80 (333)
T cd05600 1 KDFQILTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTKSEWLVKLLYAFQDDEYLYLAM 80 (333)
T ss_pred CCcEEEEEEeecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhCCCCCCccEEEEEEcCCEEEEEE
Confidence 479999999999999999999865 578999999765432 234567888999999999999999999999999999999
Q ss_pred EecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCccccccccc
Q 003963 583 EFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETYLT 662 (783)
Q Consensus 583 E~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~~~ 662 (783)
||+++++|.+++... ..+++..++.++.||+.||.|||+++ |+||||||+|||++.++.+||+|||++..... .
T Consensus 81 e~~~g~~L~~~l~~~-~~l~~~~~~~~~~qi~~~l~~lH~~~--ivH~dlkp~Nil~~~~~~~kL~Dfg~a~~~~~---~ 154 (333)
T cd05600 81 EYVPGGDFRTLLNNL-GVLSEDHARFYMAEMFEAVDALHELG--YIHRDLKPENFLIDASGHIKLTDFGLSKGIVT---Y 154 (333)
T ss_pred eCCCCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCC--ccccCCCHHHEEECCCCCEEEEeCcCCccccc---c
Confidence 999999999999754 45889999999999999999999998 99999999999999999999999999876543 2
Q ss_pred ccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhcccccccCC------CCCCHHHH
Q 003963 663 TKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLEIP------KDVDPRWA 736 (783)
Q Consensus 663 ~~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~~------~~~s~~l~ 736 (783)
.....||+.|+|||++.+..++.++|||||||++|+|++|..||...+..+....+.........+ ..+++++.
T Consensus 155 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~s~~~~ 234 (333)
T cd05600 155 ANSVVGSPDYMAPEVLRGKGYDFTVDYWSLGCMLYEFLCGFPPFSGSTPNETWENLKYWKETLQRPVYDDPRFNLSDEAW 234 (333)
T ss_pred cCCcccCccccChhHhcCCCCCCccceecchHHHhhhhhCCCCCCCCCHHHHHHHHHhccccccCCCCCccccccCHHHH
Confidence 335578999999999999999999999999999999999999999887776655543322222222 24689999
Q ss_pred HHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhcC
Q 003963 737 AIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQAS 771 (783)
Q Consensus 737 ~LI~~cL~~dP~~RPsa~ell~~L~~L~~~~f~~~ 771 (783)
+||.+||..+|.+||++.++ +.|+||+..
T Consensus 235 ~li~~~l~~~~~rr~s~~~l------l~h~~~~~~ 263 (333)
T cd05600 235 DLITKLINDPSRRFGSLEDI------KNHPFFKEV 263 (333)
T ss_pred HHHHHHhhChhhhcCCHHHH------HhCcccCCC
Confidence 99999999999999999999 667888653
No 38
>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.6e-41 Score=359.17 Aligned_cols=259 Identities=26% Similarity=0.428 Sum_probs=234.4
Q ss_pred cccceeEeeeeccCCcEEEEEEEE-eCCceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEeceeecCCceEEE
Q 003963 503 LWEDLTIGEQIGQGSCGTVYHAVW-YGSQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIV 581 (783)
Q Consensus 503 ~~~~y~i~~~LG~G~fG~Vy~a~~-~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lV 581 (783)
+.+=|.+.+.||+|-|.+|.+|++ ..+.+||||++.+.+.+.-....+.+|++.|+.++|||||++|++......+|||
T Consensus 16 IAGLYDLekTlG~GHFAVVKLArHVFTGekVAVKviDKTKlD~~st~hlfqEVRCMKLVQHpNiVRLYEViDTQTKlyLi 95 (864)
T KOG4717|consen 16 IAGLYDLEKTLGRGHFAVVKLARHVFTGEKVAVKVIDKTKLDTLSTGHLFQEVRCMKLVQHPNIVRLYEVIDTQTKLYLI 95 (864)
T ss_pred eeeeehhhhhhcCCceehhhhhhhhcccceeEEEEecccccchhhhhHHHHHHHHHHHhcCcCeeeeeehhcccceEEEE
Confidence 445688889999999999999987 4577899999999888877777888999999999999999999999999999999
Q ss_pred EEecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEc-CCCcEEEEecCCCccccccc
Q 003963 582 TEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVD-KHWTVKVGDFGLSRLKHETY 660 (783)
Q Consensus 582 ~E~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~-~~~~vkL~DFGla~~~~~~~ 660 (783)
+|+-++|+|++|+.++...+.+..+.+++.||+.|+.|||+.. +|||||||+||.+- +-|-|||+|||++..+...
T Consensus 96 LELGD~GDl~DyImKHe~Gl~E~La~kYF~QI~~AI~YCHqLH--VVHRDLKPENVVFFEKlGlVKLTDFGFSNkf~PG- 172 (864)
T KOG4717|consen 96 LELGDGGDLFDYIMKHEEGLNEDLAKKYFAQIVHAISYCHQLH--VVHRDLKPENVVFFEKLGLVKLTDFGFSNKFQPG- 172 (864)
T ss_pred EEecCCchHHHHHHhhhccccHHHHHHHHHHHHHHHHHHhhhh--hhcccCCcceeEEeeecCceEeeeccccccCCCc-
Confidence 9999999999999998888999999999999999999999988 99999999998875 5689999999999766543
Q ss_pred ccccCCCCCCcccCcccccCCCCC-chhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhcccccccCCCCCCHHHHHHH
Q 003963 661 LTTKTGKGTPQWMAPEVLRNEPSD-EKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAAIV 739 (783)
Q Consensus 661 ~~~~~~~Gt~~Y~aPE~~~~~~~s-~~sDIwSLG~il~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~l~~LI 739 (783)
....+.||+..|-|||++.|..|+ +++||||||+|||-|++|++||+..+..+.+..| +...+.+|..++.++++||
T Consensus 173 ~kL~TsCGSLAYSAPEILLGDsYDAPAVDiWSLGVILyMLVCGq~PFqeANDSETLTmI--mDCKYtvPshvS~eCrdLI 250 (864)
T KOG4717|consen 173 KKLTTSCGSLAYSAPEILLGDSYDAPAVDIWSLGVILYMLVCGQPPFQEANDSETLTMI--MDCKYTVPSHVSKECRDLI 250 (864)
T ss_pred chhhcccchhhccCchhhhcCccCCcchhhhHHHHHHHHHHhCCCccccccchhhhhhh--hcccccCchhhhHHHHHHH
Confidence 345578999999999999999986 5799999999999999999999999998888777 5567888999999999999
Q ss_pred HHhhhhCCCCCCCHHHHHHHHHHHHHHHhhcCc
Q 003963 740 ESCWHSDPQCRPSFQELVDKLRDLQRQYFQASR 772 (783)
Q Consensus 740 ~~cL~~dP~~RPsa~ell~~L~~L~~~~f~~~~ 772 (783)
..||.+||.+|.+.++| ..+.|.|.+-
T Consensus 251 ~sMLvRdPkkRAslEeI------~s~~Wlq~~D 277 (864)
T KOG4717|consen 251 QSMLVRDPKKRASLEEI------VSTSWLQAGD 277 (864)
T ss_pred HHHHhcCchhhccHHHH------hccccccCCC
Confidence 99999999999999999 5678887653
No 39
>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2e-41 Score=345.34 Aligned_cols=263 Identities=26% Similarity=0.455 Sum_probs=231.5
Q ss_pred cccccceeEeeeeccCCcEEEEEEEEeCC-ceEEEEEEecccC-CHHHHHHHHHHHHHHHhCCCCceeeEeceeecCCce
Q 003963 501 EILWEDLTIGEQIGQGSCGTVYHAVWYGS-QDVAVKVFSRQEY-SDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRL 578 (783)
Q Consensus 501 e~~~~~y~i~~~LG~G~fG~Vy~a~~~~~-~~vAiK~i~~~~~-~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~ 578 (783)
....++|..+++||+|+||+|-+++.+.. +-||||+++++.. ..+.+..-..|-++|+..+||++..+-..|+..+++
T Consensus 164 kvTm~dFdfLKvLGkGTFGKVIL~rEKat~k~YAiKIlkKeviiakdEVAHTlTE~RVL~~~~HPFLt~LKYsFQt~drl 243 (516)
T KOG0690|consen 164 KVTMEDFDFLKVLGKGTFGKVILCREKATGKLYAIKILKKEVIIAKDEVAHTLTENRVLQNCRHPFLTSLKYSFQTQDRL 243 (516)
T ss_pred eeccchhhHHHHhcCCccceEEEEeecccCceeehhhhhhhheeehHHhhhhhhHHHHHHhccCcHHHHhhhhhccCceE
Confidence 34567899999999999999999997664 5699999988754 334455556799999999999999999999999999
Q ss_pred EEEEEecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCccccc
Q 003963 579 CIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHE 658 (783)
Q Consensus 579 ~lV~E~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~~ 658 (783)
|+||||..||.|+-+|.+. ..+++.....+..+|+.||.|||+.+ ||+||||.+|+|+|.+|++||+|||+++....
T Consensus 244 CFVMeyanGGeLf~HLsre-r~FsE~RtRFYGaEIvsAL~YLHs~~--ivYRDlKLENLlLDkDGHIKitDFGLCKE~I~ 320 (516)
T KOG0690|consen 244 CFVMEYANGGELFFHLSRE-RVFSEDRTRFYGAEIVSALGYLHSRN--IVYRDLKLENLLLDKDGHIKITDFGLCKEEIK 320 (516)
T ss_pred EEEEEEccCceEeeehhhh-hcccchhhhhhhHHHHHHhhhhhhCC--eeeeechhhhheeccCCceEeeecccchhccc
Confidence 9999999999999999774 46999999999999999999999988 99999999999999999999999999987777
Q ss_pred ccccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhcccccccCCCCCCHHHHHH
Q 003963 659 TYLTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAAI 738 (783)
Q Consensus 659 ~~~~~~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~l~~L 738 (783)
......++||||.|+|||++....|+.++|+|.+|++||||++|++||.+.+..+++..| +-....+|..++++.+.|
T Consensus 321 ~g~t~kTFCGTPEYLAPEVleDnDYgraVDWWG~GVVMYEMmCGRLPFyn~dh~kLFeLI--l~ed~kFPr~ls~eAktL 398 (516)
T KOG0690|consen 321 YGDTTKTFCGTPEYLAPEVLEDNDYGRAVDWWGVGVVMYEMMCGRLPFYNKDHEKLFELI--LMEDLKFPRTLSPEAKTL 398 (516)
T ss_pred ccceeccccCChhhcCchhhccccccceeehhhhhHHHHHHHhccCcccccchhHHHHHH--HhhhccCCccCCHHHHHH
Confidence 777888999999999999999999999999999999999999999999999998888777 455778999999999999
Q ss_pred HHHhhhhCCCCCC--CHHHHHHHHHHHHHHHhhcC
Q 003963 739 VESCWHSDPQCRP--SFQELVDKLRDLQRQYFQAS 771 (783)
Q Consensus 739 I~~cL~~dP~~RP--sa~ell~~L~~L~~~~f~~~ 771 (783)
+..+|.+||.+|. ..+++.+. .+|.||..+
T Consensus 399 LsGLL~kdP~kRLGgGpdDakEi---~~h~FF~~v 430 (516)
T KOG0690|consen 399 LSGLLKKDPKKRLGGGPDDAKEI---MRHRFFASV 430 (516)
T ss_pred HHHHhhcChHhhcCCCchhHHHH---HhhhhhccC
Confidence 9999999999995 22333222 678888543
No 40
>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the
Probab=100.00 E-value=9.6e-41 Score=367.58 Aligned_cols=257 Identities=25% Similarity=0.437 Sum_probs=220.1
Q ss_pred cceeEeeeeccCCcEEEEEEEEe-CCceEEEEEEecccCCH-HHHHHHHHHHHHHHhCCCCceeeEeceeecCCceEEEE
Q 003963 505 EDLTIGEQIGQGSCGTVYHAVWY-GSQDVAVKVFSRQEYSD-EVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIVT 582 (783)
Q Consensus 505 ~~y~i~~~LG~G~fG~Vy~a~~~-~~~~vAiK~i~~~~~~~-~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lV~ 582 (783)
++|++.+.||+|+||.||+|.+. .++.||||++....... .....+.+|+.++..++||||+++++++...+.+|+||
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (350)
T cd05573 1 DDFEVIKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADADSPWIVKLYYSFQDEEHLYLVM 80 (350)
T ss_pred CCceEEEEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhcCCCCccchhhheecCCeEEEEE
Confidence 47999999999999999999986 45789999997654322 44567889999999999999999999999999999999
Q ss_pred EecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCccccccc--
Q 003963 583 EFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETY-- 660 (783)
Q Consensus 583 E~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~-- 660 (783)
||+++++|.+++... ..+++..++.++.||+.||+|||++| |+||||||+||||+.++.+||+|||++.......
T Consensus 81 e~~~~~~L~~~l~~~-~~l~~~~~~~i~~qi~~aL~~LH~~g--iiH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~ 157 (350)
T cd05573 81 EYMPGGDLMNLLIRK-DVFPEETARFYIAELVLALDSVHKLG--FIHRDIKPDNILIDADGHIKLADFGLCKKMNKAKDR 157 (350)
T ss_pred cCCCCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCC--eeccCCCHHHeEECCCCCEEeecCCCCccCcccCcc
Confidence 999999999999765 56899999999999999999999988 9999999999999999999999999987654432
Q ss_pred ---------------------------ccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHH
Q 003963 661 ---------------------------LTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQ 713 (783)
Q Consensus 661 ---------------------------~~~~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~elltG~~Pf~~~~~~~ 713 (783)
.......||+.|+|||++.+..++.++|||||||+||+|++|..||...+...
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~~~~ 237 (350)
T cd05573 158 EYYLNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPEVLRGTPYGLECDWWSLGVILYEMLYGFPPFYSDTLQE 237 (350)
T ss_pred cccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCceeeEecchhhhhhccCCCCCCCCCHHH
Confidence 12234568999999999999999999999999999999999999999888766
Q ss_pred HHHHhhcccccccCCC--CCCHHHHHHHHHhhhhCCCCCCC-HHHHHHHHHHHHHHHhhcC
Q 003963 714 VIGAVGFMNQRLEIPK--DVDPRWAAIVESCWHSDPQCRPS-FQELVDKLRDLQRQYFQAS 771 (783)
Q Consensus 714 ~~~~i~~~~~~~~~~~--~~s~~l~~LI~~cL~~dP~~RPs-a~ell~~L~~L~~~~f~~~ 771 (783)
....+........+|. .+++++.+||.+||. ||.+||+ +.++ +.|+||+..
T Consensus 238 ~~~~i~~~~~~~~~p~~~~~~~~~~~li~~ll~-dp~~R~~s~~~l------l~hp~~~~~ 291 (350)
T cd05573 238 TYNKIINWKESLRFPPDPPVSPEAIDLICRLLC-DPEDRLGSFEEI------KSHPFFKGI 291 (350)
T ss_pred HHHHHhccCCcccCCCCCCCCHHHHHHHHHHcc-ChhhcCCCHHHH------hcCCCcCCC
Confidence 6655544223333333 369999999999997 9999999 9999 678888653
No 41
>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament
Probab=100.00 E-value=2.9e-40 Score=354.34 Aligned_cols=255 Identities=24% Similarity=0.344 Sum_probs=210.1
Q ss_pred ccceeEeeeeccCCcEEEEEEEEeC-CceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEeceeecCCceEEEE
Q 003963 504 WEDLTIGEQIGQGSCGTVYHAVWYG-SQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIVT 582 (783)
Q Consensus 504 ~~~y~i~~~LG~G~fG~Vy~a~~~~-~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lV~ 582 (783)
.++|++.++||.|+||.||+|.+.. ++.||+|++...... .....+.+|+.+++.++||||+++++++...+..++||
T Consensus 4 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 82 (288)
T cd07871 4 LETYVKLDKLGEGTYATVFKGRSKLTENLVALKEIRLEHEE-GAPCTAIREVSLLKNLKHANIVTLHDIIHTERCLTLVF 82 (288)
T ss_pred cccceEeeEEecCCCEEEEEEEECCCCCEEEEEEecccccC-CcchhHHHHHHHHHhCCCCCEeeEEEEEcCCCeEEEEE
Confidence 3679999999999999999999764 567999998654322 12345678999999999999999999999999999999
Q ss_pred EecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCccccccccc
Q 003963 583 EFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETYLT 662 (783)
Q Consensus 583 E~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~~~ 662 (783)
||+++ +|.+++......+++..+..++.||+.||+|||+++ |+||||||+|||++.++.+||+|||++.........
T Consensus 83 e~~~~-~l~~~l~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~--ivH~dlkp~Nil~~~~~~~kl~DfG~~~~~~~~~~~ 159 (288)
T cd07871 83 EYLDS-DLKQYLDNCGNLMSMHNVKIFMFQLLRGLSYCHKRK--ILHRDLKPQNLLINEKGELKLADFGLARAKSVPTKT 159 (288)
T ss_pred eCCCc-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCC--cccCCCCHHHEEECCCCCEEECcCcceeeccCCCcc
Confidence 99965 999998776666889999999999999999999998 999999999999999999999999998765433333
Q ss_pred ccCCCCCCcccCcccccC-CCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhcccc-----------------c
Q 003963 663 TKTGKGTPQWMAPEVLRN-EPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQ-----------------R 724 (783)
Q Consensus 663 ~~~~~Gt~~Y~aPE~~~~-~~~s~~sDIwSLG~il~elltG~~Pf~~~~~~~~~~~i~~~~~-----------------~ 724 (783)
.....+++.|+|||++.+ ..++.++|||||||++|+|++|++||...+..+.+..+..... .
T Consensus 160 ~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (288)
T cd07871 160 YSNEVVTLWYRPPDVLLGSTEYSTPIDMWGVGCILYEMATGRPMFPGSTVKEELHLIFRLLGTPTEETWPGITSNEEFRS 239 (288)
T ss_pred ccCceecccccChHHhcCCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhccccchhhhc
Confidence 334568999999999876 5579999999999999999999999987766554433211100 0
Q ss_pred -----------ccCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHh
Q 003963 725 -----------LEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYF 768 (783)
Q Consensus 725 -----------~~~~~~~s~~l~~LI~~cL~~dP~~RPsa~ell~~L~~L~~~~f 768 (783)
......+++++.+||.+||+.||.+|||+.++ ++|+||
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dp~~R~t~~~~------l~hp~f 288 (288)
T cd07871 240 YLFPQYRAQPLINHAPRLDTDGIDLLSSLLLYETKSRISAEAA------LRHSYF 288 (288)
T ss_pred cccCccCCCchHHhCCCCCHHHHHHHHHhcCcCcccCCCHHHH------hcCCCC
Confidence 00113467889999999999999999999999 677876
No 42
>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in
Probab=100.00 E-value=2.2e-40 Score=361.48 Aligned_cols=249 Identities=25% Similarity=0.462 Sum_probs=213.7
Q ss_pred eeeccCCcEEEEEEEEeC-CceEEEEEEecccC-CHHHHHHHHHHHHHHHhCCCCceeeEeceeecCCceEEEEEecCCC
Q 003963 511 EQIGQGSCGTVYHAVWYG-SQDVAVKVFSRQEY-SDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIVTEFLPRG 588 (783)
Q Consensus 511 ~~LG~G~fG~Vy~a~~~~-~~~vAiK~i~~~~~-~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lV~E~~~gg 588 (783)
+.||+|+||.||++.+.. ++.||+|++..... .......+.+|+.+++.++||||+++++++...+.+|+||||++++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~i~~~~~~~~~~~~~~lv~E~~~~~ 80 (323)
T cd05595 1 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGG 80 (323)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCcceeeEEecCCEEEEEEeCCCCC
Confidence 469999999999999754 57899999976532 2344566778999999999999999999999999999999999999
Q ss_pred CHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCcccccccccccCCCC
Q 003963 589 SLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETYLTTKTGKG 668 (783)
Q Consensus 589 sL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~~G 668 (783)
+|..++... ..+++..++.++.||+.||+|||+++ |+||||||+||||+.++.+||+|||++..............|
T Consensus 81 ~L~~~l~~~-~~~~~~~~~~~~~qi~~aL~~LH~~~--ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~g 157 (323)
T cd05595 81 ELFFHLSRE-RVFTEERARFYGAEIVSALEYLHSRD--VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCG 157 (323)
T ss_pred cHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCC--eEecCCCHHHEEEcCCCCEEecccHHhccccCCCCccccccC
Confidence 999988764 46899999999999999999999998 999999999999999999999999998754333223334578
Q ss_pred CCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhcccccccCCCCCCHHHHHHHHHhhhhCCC
Q 003963 669 TPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAAIVESCWHSDPQ 748 (783)
Q Consensus 669 t~~Y~aPE~~~~~~~s~~sDIwSLG~il~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~l~~LI~~cL~~dP~ 748 (783)
|+.|+|||++.+..++.++|||||||++|+|++|+.||...+.......+. .....+|..+++++.+||.+||..||.
T Consensus 158 t~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~~~~~~~--~~~~~~p~~~~~~~~~li~~~L~~dP~ 235 (323)
T cd05595 158 TPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELIL--MEEIRFPRTLSPEAKSLLAGLLKKDPK 235 (323)
T ss_pred CcCcCCcccccCCCCCchhchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHh--cCCCCCCCCCCHHHHHHHHHHccCCHH
Confidence 999999999999999999999999999999999999998877766655542 334567788999999999999999999
Q ss_pred CCC-----CHHHHHHHHHHHHHHHhhc
Q 003963 749 CRP-----SFQELVDKLRDLQRQYFQA 770 (783)
Q Consensus 749 ~RP-----sa~ell~~L~~L~~~~f~~ 770 (783)
+|| ++.++ +.|+||..
T Consensus 236 ~R~~~~~~~~~~~------l~h~~~~~ 256 (323)
T cd05595 236 QRLGGGPSDAKEV------MEHRFFLS 256 (323)
T ss_pred HhCCCCCCCHHHH------HcCCCcCC
Confidence 998 88888 56777754
No 43
>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl
Probab=100.00 E-value=2.3e-40 Score=359.45 Aligned_cols=247 Identities=27% Similarity=0.432 Sum_probs=213.2
Q ss_pred eccCCcEEEEEEEEeC-CceEEEEEEecccC-CHHHHHHHHHHHHHHHhCCCCceeeEeceeecCCceEEEEEecCCCCH
Q 003963 513 IGQGSCGTVYHAVWYG-SQDVAVKVFSRQEY-SDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIVTEFLPRGSL 590 (783)
Q Consensus 513 LG~G~fG~Vy~a~~~~-~~~vAiK~i~~~~~-~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lV~E~~~ggsL 590 (783)
||+|+||.||+|.+.. ++.||+|++..... .......+.+|+.+++.++||||+++++++...+.+|+||||+++++|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L 80 (312)
T cd05585 1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQVNCPFIVPLKFSFQSPEKLYLVLAFINGGEL 80 (312)
T ss_pred CCcCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCcEeceeeEEecCCeEEEEEcCCCCCcH
Confidence 7999999999999865 46799999876432 334456778899999999999999999999999999999999999999
Q ss_pred HHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCcccccccccccCCCCCC
Q 003963 591 FRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETYLTTKTGKGTP 670 (783)
Q Consensus 591 ~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~~Gt~ 670 (783)
.+++... ..+++..+..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++............+||+
T Consensus 81 ~~~l~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~--i~HrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~ 157 (312)
T cd05585 81 FHHLQRE-GRFDLSRARFYTAELLCALENLHKFN--VIYRDLKPENILLDYQGHIALCDFGLCKLNMKDDDKTNTFCGTP 157 (312)
T ss_pred HHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCC--eEeCCCCHHHeEECCCCcEEEEECcccccCccCCCccccccCCc
Confidence 9999764 46899999999999999999999998 99999999999999999999999999875433333334567999
Q ss_pred cccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhcccccccCCCCCCHHHHHHHHHhhhhCCCCC
Q 003963 671 QWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAAIVESCWHSDPQCR 750 (783)
Q Consensus 671 ~Y~aPE~~~~~~~s~~sDIwSLG~il~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~l~~LI~~cL~~dP~~R 750 (783)
.|+|||++.+..++.++|||||||++|+|++|..||...+..+....+ ......++..+++++.+||.+||..||.+|
T Consensus 158 ~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~li~~~L~~dp~~R 235 (312)
T cd05585 158 EYLAPELLLGHGYTKAVDWWTLGVLLYEMLTGLPPFYDENVNEMYRKI--LQEPLRFPDGFDRDAKDLLIGLLSRDPTRR 235 (312)
T ss_pred ccCCHHHHcCCCCCCccceechhHHHHHHHhCCCCcCCCCHHHHHHHH--HcCCCCCCCcCCHHHHHHHHHHcCCCHHHc
Confidence 999999999999999999999999999999999999888777666554 334566778899999999999999999999
Q ss_pred CC---HHHHHHHHHHHHHHHhhc
Q 003963 751 PS---FQELVDKLRDLQRQYFQA 770 (783)
Q Consensus 751 Ps---a~ell~~L~~L~~~~f~~ 770 (783)
|+ +.++ +.|+||+.
T Consensus 236 ~~~~~~~e~------l~hp~~~~ 252 (312)
T cd05585 236 LGYNGAQEI------KNHPFFSQ 252 (312)
T ss_pred CCCCCHHHH------HcCCCcCC
Confidence 75 5666 67788864
No 44
>PLN00034 mitogen-activated protein kinase kinase; Provisional
Probab=100.00 E-value=1.6e-39 Score=359.03 Aligned_cols=256 Identities=27% Similarity=0.408 Sum_probs=210.3
Q ss_pred ccccceeEeeeeccCCcEEEEEEEEeC-CceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEeceeecCCceEE
Q 003963 502 ILWEDLTIGEQIGQGSCGTVYHAVWYG-SQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCI 580 (783)
Q Consensus 502 ~~~~~y~i~~~LG~G~fG~Vy~a~~~~-~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~l 580 (783)
....+|+++++||+|+||.||++.+.. ++.||||++.... .......+.+|+.+++.++|+||+++++++...+.+++
T Consensus 71 ~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 149 (353)
T PLN00034 71 KSLSELERVNRIGSGAGGTVYKVIHRPTGRLYALKVIYGNH-EDTVRRQICREIEILRDVNHPNVVKCHDMFDHNGEIQV 149 (353)
T ss_pred CCHHHHhhhhhccCCCCeEEEEEEECCCCCEEEEEEEecCC-cHHHHHHHHHHHHHHHhCCCCCcceeeeEeccCCeEEE
Confidence 345678899999999999999999764 5789999986543 34456778999999999999999999999999999999
Q ss_pred EEEecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCccccccc
Q 003963 581 VTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETY 660 (783)
Q Consensus 581 V~E~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~ 660 (783)
||||+.+++|.... ...+..+..++.||+.||.|||+++ |+||||||+||||+.++.+||+|||++.......
T Consensus 150 v~e~~~~~~L~~~~-----~~~~~~~~~i~~qi~~aL~~LH~~~--ivHrDlkp~NIll~~~~~~kL~DfG~~~~~~~~~ 222 (353)
T PLN00034 150 LLEFMDGGSLEGTH-----IADEQFLADVARQILSGIAYLHRRH--IVHRDIKPSNLLINSAKNVKIADFGVSRILAQTM 222 (353)
T ss_pred EEecCCCCcccccc-----cCCHHHHHHHHHHHHHHHHHHHHCC--EeecCCCHHHEEEcCCCCEEEcccccceeccccc
Confidence 99999999986532 3556778889999999999999998 9999999999999999999999999998665443
Q ss_pred ccccCCCCCCcccCcccccC-----CCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHh--hcccccccCCCCCCH
Q 003963 661 LTTKTGKGTPQWMAPEVLRN-----EPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAV--GFMNQRLEIPKDVDP 733 (783)
Q Consensus 661 ~~~~~~~Gt~~Y~aPE~~~~-----~~~s~~sDIwSLG~il~elltG~~Pf~~~~~~~~~~~i--~~~~~~~~~~~~~s~ 733 (783)
.......||..|+|||++.. ...+.++|||||||++|+|++|+.||...........+ .........+..++.
T Consensus 223 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (353)
T PLN00034 223 DPCNSSVGTIAYMSPERINTDLNHGAYDGYAGDIWSLGVSILEFYLGRFPFGVGRQGDWASLMCAICMSQPPEAPATASR 302 (353)
T ss_pred ccccccccCccccCccccccccccCcCCCcchhHHHHHHHHHHHHhCCCCCCCCCCccHHHHHHHHhccCCCCCCCccCH
Confidence 33345679999999998743 33457899999999999999999999743322221111 112334456678899
Q ss_pred HHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhcC
Q 003963 734 RWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQAS 771 (783)
Q Consensus 734 ~l~~LI~~cL~~dP~~RPsa~ell~~L~~L~~~~f~~~ 771 (783)
++.+||.+||..||.+||++.++ ++|+||...
T Consensus 303 ~l~~li~~~l~~~P~~Rpt~~el------l~hp~~~~~ 334 (353)
T PLN00034 303 EFRHFISCCLQREPAKRWSAMQL------LQHPFILRA 334 (353)
T ss_pred HHHHHHHHHccCChhhCcCHHHH------hcCcccccC
Confidence 99999999999999999999999 678999654
No 45
>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate
Probab=100.00 E-value=2.7e-40 Score=361.65 Aligned_cols=249 Identities=25% Similarity=0.465 Sum_probs=213.9
Q ss_pred eeeccCCcEEEEEEEEeC-CceEEEEEEecccC-CHHHHHHHHHHHHHHHhCCCCceeeEeceeecCCceEEEEEecCCC
Q 003963 511 EQIGQGSCGTVYHAVWYG-SQDVAVKVFSRQEY-SDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIVTEFLPRG 588 (783)
Q Consensus 511 ~~LG~G~fG~Vy~a~~~~-~~~vAiK~i~~~~~-~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lV~E~~~gg 588 (783)
+.||+|+||.||++.+.. ++.||+|++..... .......+.+|+.+++.++||||+++++++...+.+|+||||++++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~Ey~~~g 80 (328)
T cd05593 1 KLLGKGTFGKVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNTRHPFLTSLKYSFQTKDRLCFVMEYVNGG 80 (328)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCEEEEEEeCCCCC
Confidence 468999999999999764 56799999976543 2344567888999999999999999999999999999999999999
Q ss_pred CHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCcccccccccccCCCC
Q 003963 589 SLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETYLTTKTGKG 668 (783)
Q Consensus 589 sL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~~G 668 (783)
+|..++... ..+++..++.++.||+.||+|||+++ |+||||||+||||+.++.+||+|||+++............+|
T Consensus 81 ~L~~~l~~~-~~l~~~~~~~~~~qi~~aL~~LH~~~--ivHrDikp~NIll~~~~~~kL~DfG~~~~~~~~~~~~~~~~g 157 (328)
T cd05593 81 ELFFHLSRE-RVFSEDRTRFYGAEIVSALDYLHSGK--IVYRDLKLENLMLDKDGHIKITDFGLCKEGITDAATMKTFCG 157 (328)
T ss_pred CHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCC--eEecccCHHHeEECCCCcEEEecCcCCccCCCcccccccccC
Confidence 999988754 46899999999999999999999998 999999999999999999999999998754333223345579
Q ss_pred CCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhcccccccCCCCCCHHHHHHHHHhhhhCCC
Q 003963 669 TPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAAIVESCWHSDPQ 748 (783)
Q Consensus 669 t~~Y~aPE~~~~~~~s~~sDIwSLG~il~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~l~~LI~~cL~~dP~ 748 (783)
|+.|+|||++.+..++.++|||||||++|+|++|..||...+..+....+ ......+|..+++++.+||.+||.+||.
T Consensus 158 t~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~Pf~~~~~~~~~~~~--~~~~~~~p~~~~~~~~~li~~~L~~dP~ 235 (328)
T cd05593 158 TPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELI--LMEDIKFPRTLSADAKSLLSGLLIKDPN 235 (328)
T ss_pred CcCccChhhhcCCCCCccCCccccchHHHHHhhCCCCCCCCCHHHHHHHh--ccCCccCCCCCCHHHHHHHHHHcCCCHH
Confidence 99999999999999999999999999999999999999887776665554 3345567888999999999999999999
Q ss_pred CCC-----CHHHHHHHHHHHHHHHhhc
Q 003963 749 CRP-----SFQELVDKLRDLQRQYFQA 770 (783)
Q Consensus 749 ~RP-----sa~ell~~L~~L~~~~f~~ 770 (783)
+|+ ++.++ +.|+||..
T Consensus 236 ~R~~~~~~~~~~i------l~h~~~~~ 256 (328)
T cd05593 236 KRLGGGPDDAKEI------MRHSFFTG 256 (328)
T ss_pred HcCCCCCCCHHHH------hcCCCcCC
Confidence 997 89999 45677643
No 46
>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N. Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved
Probab=100.00 E-value=3.6e-40 Score=359.82 Aligned_cols=252 Identities=24% Similarity=0.417 Sum_probs=213.6
Q ss_pred eeEeeeeccCCcEEEEEEEEeC-CceEEEEEEecccC-CHHHHHHHHHHHHHH---HhCCCCceeeEeceeecCCceEEE
Q 003963 507 LTIGEQIGQGSCGTVYHAVWYG-SQDVAVKVFSRQEY-SDEVIHSFRQEVSLM---KRLRHPNVLLFMGAVTSPQRLCIV 581 (783)
Q Consensus 507 y~i~~~LG~G~fG~Vy~a~~~~-~~~vAiK~i~~~~~-~~~~~~~~~~Ei~il---~~l~HpnIv~l~~~~~~~~~~~lV 581 (783)
|++.+.||+|+||.||+|.+.. ++.||||++.+... .......+.+|+.++ +.++||||+++++++...+.+|+|
T Consensus 1 y~i~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~~~~~~~~lv 80 (324)
T cd05589 1 FRCLAVLGRGHFGKVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPFLVNLFACFQTEDHVCFV 80 (324)
T ss_pred CeEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccccCCCChhceeeEEEcCCEEEEE
Confidence 6789999999999999998764 57899999976542 223345667776665 456799999999999999999999
Q ss_pred EEecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCcccccccc
Q 003963 582 TEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETYL 661 (783)
Q Consensus 582 ~E~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~~ 661 (783)
|||+++++|..++.. ..+++..++.++.||+.||+|||+++ |+||||||+|||++.++.+||+|||++........
T Consensus 81 ~E~~~~~~L~~~~~~--~~l~~~~~~~~~~qi~~al~~lH~~~--ivHrdlkp~Nill~~~~~~kL~Dfg~~~~~~~~~~ 156 (324)
T cd05589 81 MEYAAGGDLMMHIHT--DVFSEPRAVFYAACVVLGLQYLHENK--IVYRDLKLDNLLLDTEGFVKIADFGLCKEGMGFGD 156 (324)
T ss_pred EcCCCCCcHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHHhCC--eEecCCCHHHeEECCCCcEEeCcccCCccCCCCCC
Confidence 999999999988864 35899999999999999999999998 99999999999999999999999999875433333
Q ss_pred cccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhcccccccCCCCCCHHHHHHHHH
Q 003963 662 TTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAAIVES 741 (783)
Q Consensus 662 ~~~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~l~~LI~~ 741 (783)
.....+|++.|+|||++.+..++.++|||||||++|+|++|..||...+.......+. .....+|..+++.+.+||.+
T Consensus 157 ~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~G~~pf~~~~~~~~~~~i~--~~~~~~p~~~~~~~~~li~~ 234 (324)
T cd05589 157 RTSTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIYEMLVGESPFPGDDEEEVFDSIV--NDEVRYPRFLSREAISIMRR 234 (324)
T ss_pred cccccccCccccCHhHhcCCCCCcccchhhHHHHHHHHHhCCCCCCCCCHHHHHHHHH--hCCCCCCCCCCHHHHHHHHH
Confidence 3445679999999999999999999999999999999999999999887777665553 33455777899999999999
Q ss_pred hhhhCCCCCC-----CHHHHHHHHHHHHHHHhhc
Q 003963 742 CWHSDPQCRP-----SFQELVDKLRDLQRQYFQA 770 (783)
Q Consensus 742 cL~~dP~~RP-----sa~ell~~L~~L~~~~f~~ 770 (783)
||..||.+|| ++.++ ++|+||+.
T Consensus 235 ~L~~dP~~R~~~~~~~~~~l------~~~~~f~~ 262 (324)
T cd05589 235 LLRRNPERRLGSGEKDAEDV------KKQPFFRD 262 (324)
T ss_pred HhhcCHhHcCCCCCCCHHHH------hhCCCcCC
Confidence 9999999999 56777 56777754
No 47
>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes
Probab=100.00 E-value=5e-40 Score=351.32 Aligned_cols=255 Identities=20% Similarity=0.290 Sum_probs=210.1
Q ss_pred cceeEeeeeccCCcEEEEEEEEeC-CceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEeceeecCCceEEEEE
Q 003963 505 EDLTIGEQIGQGSCGTVYHAVWYG-SQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIVTE 583 (783)
Q Consensus 505 ~~y~i~~~LG~G~fG~Vy~a~~~~-~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lV~E 583 (783)
++|++.+.||+|+||.||++.+.. ++.||+|++............+.+|+.+++.++||||+++++++...+.+|+|||
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 80 (287)
T cd07848 1 NKFEVLGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEENEEVKETTLRELKMLRTLKQENIVELKEAFRRRGKLYLVFE 80 (287)
T ss_pred CCceEEEEecccCCEEEEEEEECCCCcEEEEEEEecccccccchhhHHHHHHHHHhCCCccccchhhhEecCCEEEEEEe
Confidence 479999999999999999999865 4679999997665444555678889999999999999999999999999999999
Q ss_pred ecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCcccccccc-c
Q 003963 584 FLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETYL-T 662 (783)
Q Consensus 584 ~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~~-~ 662 (783)
|++++.|..+. .....+++..++.++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||++........ .
T Consensus 81 ~~~~~~l~~~~-~~~~~~~~~~~~~~~~qi~~~L~~lH~~~--i~H~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~ 157 (287)
T cd07848 81 YVEKNMLELLE-EMPNGVPPEKVRSYIYQLIKAIHWCHKND--IVHRDIKPENLLISHNDVLKLCDFGFARNLSEGSNAN 157 (287)
T ss_pred cCCCCHHHHHH-hcCCCCCHHHHHHHHHHHHHHHHHHHHCC--eecCCCCHHHEEEcCCCcEEEeeccCccccccccccc
Confidence 99886665444 44456899999999999999999999998 99999999999999999999999999976543221 2
Q ss_pred ccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccccc-----------------c
Q 003963 663 TKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQR-----------------L 725 (783)
Q Consensus 663 ~~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~elltG~~Pf~~~~~~~~~~~i~~~~~~-----------------~ 725 (783)
.....|++.|+|||++.+..++.++|||||||++|+|++|++||...+.......+...... .
T Consensus 158 ~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (287)
T cd07848 158 YTEYVATRWYRSPELLLGAPYGKAVDMWSVGCILGELSDGQPLFPGESEIDQLFTIQKVLGPLPAEQMKLFYSNPRFHGL 237 (287)
T ss_pred ccccccccccCCcHHHcCCCCCCchhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHhhhccchhccc
Confidence 22346899999999999988999999999999999999999999876654433222111000 0
Q ss_pred -------------cCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHh
Q 003963 726 -------------EIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYF 768 (783)
Q Consensus 726 -------------~~~~~~s~~l~~LI~~cL~~dP~~RPsa~ell~~L~~L~~~~f 768 (783)
.....++..+.+||++||+.||++|||+.++ |+|+||
T Consensus 238 ~~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~~P~~R~s~~~~------l~hp~f 287 (287)
T cd07848 238 RFPAVNHPQSLERRYLGILSGVLLDLMKNLLKLNPTDRYLTEQC------LNHPAF 287 (287)
T ss_pred ccCcccCcccHHHhhhcccCHHHHHHHHHHccCCcccCCCHHHH------hcCCCC
Confidence 0112367889999999999999999999999 567876
No 48
>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an
Probab=100.00 E-value=4.8e-40 Score=355.02 Aligned_cols=260 Identities=25% Similarity=0.354 Sum_probs=210.2
Q ss_pred cceeEeeeeccCCcEEEEEEEEeC-CceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEeceeecCCceEEEEE
Q 003963 505 EDLTIGEQIGQGSCGTVYHAVWYG-SQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIVTE 583 (783)
Q Consensus 505 ~~y~i~~~LG~G~fG~Vy~a~~~~-~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lV~E 583 (783)
++|++.++||+|+||.||+|.+.. ++.||||++....... ....+.+|+.+++.++||||+++++++......|+|||
T Consensus 5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 83 (303)
T cd07869 5 DSYEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEEEG-TPFTAIREASLLKGLKHANIVLLHDIIHTKETLTLVFE 83 (303)
T ss_pred ccceEeeeEEecCCEEEEEEEECCCCCEEEEEEeccccccc-cchhHHHHHHHHhhCCCCCcCeEEEEEecCCeEEEEEE
Confidence 689999999999999999999864 5679999987543222 22356789999999999999999999999999999999
Q ss_pred ecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCcccccccccc
Q 003963 584 FLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETYLTT 663 (783)
Q Consensus 584 ~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~~~~ 663 (783)
|+. ++|.+++......+++..+..++.||+.||+|||+++ |+||||||+|||++.++.+||+|||++..........
T Consensus 84 ~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~--ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~ 160 (303)
T cd07869 84 YVH-TDLCQYMDKHPGGLHPENVKLFLFQLLRGLSYIHQRY--ILHRDLKPQNLLISDTGELKLADFGLARAKSVPSHTY 160 (303)
T ss_pred CCC-cCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCC--eecCCCCHHHEEECCCCCEEECCCCcceeccCCCccC
Confidence 995 6888888776667899999999999999999999998 9999999999999999999999999987544333333
Q ss_pred cCCCCCCcccCcccccCC-CCCchhHHHHHHHHHHHHHcCCCCCCCCChH-HHHHHhhccccc-----------------
Q 003963 664 KTGKGTPQWMAPEVLRNE-PSDEKSDVYSFGVILWELATEKIPWDNLNSM-QVIGAVGFMNQR----------------- 724 (783)
Q Consensus 664 ~~~~Gt~~Y~aPE~~~~~-~~s~~sDIwSLG~il~elltG~~Pf~~~~~~-~~~~~i~~~~~~----------------- 724 (783)
....|++.|+|||++.+. .++.++|||||||++|+|++|..||...... ..+..+......
T Consensus 161 ~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (303)
T cd07869 161 SNEVVTLWYRPPDVLLGSTEYSTCLDMWGVGCIFVEMIQGVAAFPGMKDIQDQLERIFLVLGTPNEDTWPGVHSLPHFKP 240 (303)
T ss_pred CCCcccCCCCChHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHHhCCCChhhccchhhcccccc
Confidence 445789999999998764 5789999999999999999999999875432 222111100000
Q ss_pred --c--cCC---------CCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhcCcCC
Q 003963 725 --L--EIP---------KDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQASRST 774 (783)
Q Consensus 725 --~--~~~---------~~~s~~l~~LI~~cL~~dP~~RPsa~ell~~L~~L~~~~f~~~~~~ 774 (783)
. ..+ ..+++.+.+||.+||+.||.+|||+.++ +.|+||+.....
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dp~~R~s~~~~------l~h~~f~~~~~~ 297 (303)
T cd07869 241 ERFTLYSPKNLRQAWNKLSYVNHAEDLASKLLQCFPKNRLSAQAA------LSHEYFSDLPPR 297 (303)
T ss_pred ccccccCCccHHHHhhccCCChHHHHHHHHHhccCchhccCHHHH------hcCcccccCChh
Confidence 0 000 1245678999999999999999999999 789999876543
No 49
>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus
Probab=100.00 E-value=7.1e-40 Score=363.36 Aligned_cols=257 Identities=23% Similarity=0.359 Sum_probs=214.3
Q ss_pred cceeEeeeeccCCcEEEEEEEEeC-CceEEEEEEecccC-CHHHHHHHHHHHHHHHhCCCCceeeEeceeecCCceEEEE
Q 003963 505 EDLTIGEQIGQGSCGTVYHAVWYG-SQDVAVKVFSRQEY-SDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIVT 582 (783)
Q Consensus 505 ~~y~i~~~LG~G~fG~Vy~a~~~~-~~~vAiK~i~~~~~-~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lV~ 582 (783)
++|++.++||+|+||.||+|.+.. ++.||||++.+... .......+.+|+.++..++||||+++++.+.+...+|+||
T Consensus 1 ~~y~~~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~~~~~iv~~~~~~~~~~~~~lv~ 80 (363)
T cd05628 1 EDFESLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEADSLWVVKMFYSFQDKLNLYLIM 80 (363)
T ss_pred CCceEeEEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhCCCCCcceEEEEEecCCeEEEEE
Confidence 479999999999999999998765 56799999976443 2344567888999999999999999999999999999999
Q ss_pred EecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCcccccccc-
Q 003963 583 EFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETYL- 661 (783)
Q Consensus 583 E~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~~- 661 (783)
|||++|+|.+++... ..+++..+..++.||+.||+|||+++ |+||||||+||||+.++.+||+|||+++.......
T Consensus 81 E~~~gg~L~~~l~~~-~~l~~~~~~~~~~qi~~aL~~lH~~g--ivHrDlKp~NILi~~~~~vkL~DFGla~~~~~~~~~ 157 (363)
T cd05628 81 EFLPGGDMMTLLMKK-DTLTEEETQFYIAETVLAIDSIHQLG--FIHRDIKPDNLLLDSKGHVKLSDFGLCTGLKKAHRT 157 (363)
T ss_pred cCCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCC--eEecCCCHHHeEECCCCCEEEeeccCcccccccccc
Confidence 999999999999764 46899999999999999999999998 99999999999999999999999999875432100
Q ss_pred ----------------------------------cccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCC
Q 003963 662 ----------------------------------TTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWD 707 (783)
Q Consensus 662 ----------------------------------~~~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~elltG~~Pf~ 707 (783)
.....+||+.|+|||++.+..++.++|||||||++|+|++|..||.
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DvwSlGvil~ell~G~~Pf~ 237 (363)
T cd05628 158 EFYRNLNHSLPSDFTFQNMNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPPFC 237 (363)
T ss_pred cccccccccccccccccccccccccchhhhccccccccccCCccccCHHHHcCCCCCCchhhhhhHHHHHHHHhCCCCCC
Confidence 0123479999999999999999999999999999999999999999
Q ss_pred CCChHHHHHHhhcccccccCCC--CCCHHHHHHHHHhhh--hCCCCCCCHHHHHHHHHHHHHHHhhc
Q 003963 708 NLNSMQVIGAVGFMNQRLEIPK--DVDPRWAAIVESCWH--SDPQCRPSFQELVDKLRDLQRQYFQA 770 (783)
Q Consensus 708 ~~~~~~~~~~i~~~~~~~~~~~--~~s~~l~~LI~~cL~--~dP~~RPsa~ell~~L~~L~~~~f~~ 770 (783)
..+.......+........+|. .+++++++||.+|+. .++..||++.+| ++|+||+.
T Consensus 238 ~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~~li~~l~~~~~~r~~r~~~~ei------~~hp~f~~ 298 (363)
T cd05628 238 SETPQETYKKVMNWKETLIFPPEVPISEKAKDLILRFCCEWEHRIGAPGVEEI------KTNPFFEG 298 (363)
T ss_pred CCCHHHHHHHHHcCcCcccCCCcCCCCHHHHHHHHHHcCChhhcCCCCCHHHH------hCCCCCCC
Confidence 8887776666644333344443 468999999998664 223346899999 67888854
No 50
>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor
Probab=100.00 E-value=2.2e-39 Score=343.09 Aligned_cols=257 Identities=25% Similarity=0.439 Sum_probs=218.9
Q ss_pred cccceeEeeeeccCCcEEEEEEEEeC----CceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEeceeecCCce
Q 003963 503 LWEDLTIGEQIGQGSCGTVYHAVWYG----SQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRL 578 (783)
Q Consensus 503 ~~~~y~i~~~LG~G~fG~Vy~a~~~~----~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~ 578 (783)
..++|++.+.||+|+||.||+|.+.. ...||+|.+.... .......+.+|+.+++.++||||+++++++...+..
T Consensus 3 ~~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~-~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~ 81 (266)
T cd05064 3 DNKSIKIERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGC-SDKQRRGFLAEALTLGQFDHSNIVRLEGVITRGNTM 81 (266)
T ss_pred chHHeEEeeeecccCCCeEEEEEEecCCCceeeEEEEecCCCC-CHHHHHHHHHHHHHHhcCCCCCcCeEEEEEecCCCc
Confidence 35689999999999999999998642 3579999987643 334456788999999999999999999999999999
Q ss_pred EEEEEecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCccccc
Q 003963 579 CIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHE 658 (783)
Q Consensus 579 ~lV~E~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~~ 658 (783)
++||||+++++|.+++......+++..++.++.||+.||+|||+++ ++||||||+|||++.++.++|+|||.+.....
T Consensus 82 ~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~i~~al~~lH~~~--iiH~dikp~nili~~~~~~~l~dfg~~~~~~~ 159 (266)
T cd05064 82 MIVTEYMSNGALDSFLRKHEGQLVAGQLMGMLPGLASGMKYLSEMG--YVHKGLAAHKVLVNSDLVCKISGFRRLQEDKS 159 (266)
T ss_pred EEEEEeCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCC--EeeccccHhhEEEcCCCcEEECCCcccccccc
Confidence 9999999999999999876667899999999999999999999998 99999999999999999999999998764322
Q ss_pred cc-ccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCChHHHHHHhhcccccccCCCCCCHHHH
Q 003963 659 TY-LTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELAT-EKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWA 736 (783)
Q Consensus 659 ~~-~~~~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~l~ 736 (783)
.. .......++..|+|||++.+..++.++|||||||++|+|++ |..||...........+.. ....+.+..++..+.
T Consensus 160 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 238 (266)
T cd05064 160 EAIYTTMSGKSPVLWAAPEAIQYHHFSSASDVWSFGIVMWEVMSYGERPYWDMSGQDVIKAVED-GFRLPAPRNCPNLLH 238 (266)
T ss_pred cchhcccCCCCceeecCHHHHhhCCccchhHHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHHHC-CCCCCCCCCCCHHHH
Confidence 21 11123345678999999999999999999999999999875 9999998887776665542 234456778999999
Q ss_pred HHHHHhhhhCCCCCCCHHHHHHHHHHH
Q 003963 737 AIVESCWHSDPQCRPSFQELVDKLRDL 763 (783)
Q Consensus 737 ~LI~~cL~~dP~~RPsa~ell~~L~~L 763 (783)
+++.+||+.+|.+||++.+|++.|.++
T Consensus 239 ~li~~c~~~~p~~RP~~~~i~~~l~~~ 265 (266)
T cd05064 239 QLMLDCWQKERGERPRFSQIHSILSKM 265 (266)
T ss_pred HHHHHHcCCCchhCCCHHHHHHHHHhh
Confidence 999999999999999999999988764
No 51
>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=100.00 E-value=7e-42 Score=337.41 Aligned_cols=250 Identities=22% Similarity=0.361 Sum_probs=220.8
Q ss_pred ccceeEeeeeccCCcEEEEEEEEeC-CceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEeceeecCCceEEEE
Q 003963 504 WEDLTIGEQIGQGSCGTVYHAVWYG-SQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIVT 582 (783)
Q Consensus 504 ~~~y~i~~~LG~G~fG~Vy~a~~~~-~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lV~ 582 (783)
.+.|.+.+.||+|.|+.||++.+.. ++.+|+|++....+.....+.+.+|++|.+.|+|||||++.+.+......|||+
T Consensus 10 ~d~y~l~e~igkG~FSvVrRc~~~~tg~~fa~kiin~~k~~~~~~e~l~rEarIC~~LqHP~IvrL~~ti~~~~~~ylvF 89 (355)
T KOG0033|consen 10 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVF 89 (355)
T ss_pred chhhhHHHHHccCchHHHHHHHhccchHHHHHHHhhhhhhccccHHHHHHHHHHHHhcCCCcEeehhhhhcccceeEEEE
Confidence 3678899999999999999998754 577999998877776666788999999999999999999999999999999999
Q ss_pred EecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEc---CCCcEEEEecCCCcccccc
Q 003963 583 EFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVD---KHWTVKVGDFGLSRLKHET 659 (783)
Q Consensus 583 E~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~---~~~~vkL~DFGla~~~~~~ 659 (783)
|+|.|++|..-+-.. ..+++..+-..++||+++|.|+|.++ |||||+||+|+|+. ...-|||+|||++.... .
T Consensus 90 e~m~G~dl~~eIV~R-~~ySEa~aSH~~rQiLeal~yCH~n~--IvHRDvkP~nllLASK~~~A~vKL~~FGvAi~l~-~ 165 (355)
T KOG0033|consen 90 DLVTGGELFEDIVAR-EFYSEADASHCIQQILEALAYCHSNG--IVHRDLKPENLLLASKAKGAAVKLADFGLAIEVN-D 165 (355)
T ss_pred ecccchHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHhcC--ceeccCChhheeeeeccCCCceeecccceEEEeC-C
Confidence 999999996555332 45888899999999999999999999 99999999999994 34569999999998777 4
Q ss_pred cccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhcccccc--cCCCCCCHHHHH
Q 003963 660 YLTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRL--EIPKDVDPRWAA 737 (783)
Q Consensus 660 ~~~~~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~elltG~~Pf~~~~~~~~~~~i~~~~~~~--~~~~~~s~~l~~ 737 (783)
......++|||.|||||++...+++..+|||+.|++||-||.|.+||.+.+...+++.+....... +.+..++++.++
T Consensus 166 g~~~~G~~GtP~fmaPEvvrkdpy~kpvDiW~cGViLfiLL~G~~PF~~~~~~rlye~I~~g~yd~~~~~w~~is~~Ak~ 245 (355)
T KOG0033|consen 166 GEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYEQIKAGAYDYPSPEWDTVTPEAKS 245 (355)
T ss_pred ccccccccCCCcccCHHHhhcCCCCCcchhhhhhHHHHHHHhCCCCCCCccHHHHHHHHhccccCCCCcccCcCCHHHHH
Confidence 455667899999999999999999999999999999999999999999988888888886554433 345689999999
Q ss_pred HHHHhhhhCCCCCCCHHHHH
Q 003963 738 IVESCWHSDPQCRPSFQELV 757 (783)
Q Consensus 738 LI~~cL~~dP~~RPsa~ell 757 (783)
||++||..||.+|.|+.|.|
T Consensus 246 LvrrML~~dP~kRIta~EAL 265 (355)
T KOG0033|consen 246 LIRRMLTVNPKKRITADEAL 265 (355)
T ss_pred HHHHHhccChhhhccHHHHh
Confidence 99999999999999999984
No 52
>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C. Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory
Probab=100.00 E-value=6.8e-40 Score=357.68 Aligned_cols=254 Identities=25% Similarity=0.421 Sum_probs=215.7
Q ss_pred ceeEeeeeccCCcEEEEEEEEeCC-ceEEEEEEecccC-CHHHHHHHHHHHHHHHhCCCC-ceeeEeceeecCCceEEEE
Q 003963 506 DLTIGEQIGQGSCGTVYHAVWYGS-QDVAVKVFSRQEY-SDEVIHSFRQEVSLMKRLRHP-NVLLFMGAVTSPQRLCIVT 582 (783)
Q Consensus 506 ~y~i~~~LG~G~fG~Vy~a~~~~~-~~vAiK~i~~~~~-~~~~~~~~~~Ei~il~~l~Hp-nIv~l~~~~~~~~~~~lV~ 582 (783)
+|++.+.||+|+||.||+|.+..+ +.||||++.+... .......+..|+.++..+.|+ +|+++++++...+.+|+||
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (324)
T cd05587 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVM 80 (324)
T ss_pred CceEEEEEeeccCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCCCCceeeeEEEEEcCCEEEEEE
Confidence 589999999999999999998654 6799999976533 233456778899999999764 6889999999999999999
Q ss_pred EecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCccccccccc
Q 003963 583 EFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETYLT 662 (783)
Q Consensus 583 E~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~~~ 662 (783)
||+++++|.+++... ..+++..+..++.||+.||+|||+++ |+||||||+|||++.++.+||+|||++.........
T Consensus 81 E~~~~g~L~~~~~~~-~~~~~~~~~~~~~qi~~al~~lH~~~--ivH~dlkp~Nill~~~~~~kL~Dfg~~~~~~~~~~~ 157 (324)
T cd05587 81 EYVNGGDLMYHIQQV-GKFKEPHAVFYAAEIAIGLFFLHSKG--IIYRDLKLDNVMLDAEGHIKIADFGMCKENIFGGKT 157 (324)
T ss_pred cCCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCC--eEecCCCHHHeEEcCCCCEEEeecCcceecCCCCCc
Confidence 999999999998764 45889999999999999999999998 999999999999999999999999998643322223
Q ss_pred ccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhcccccccCCCCCCHHHHHHHHHh
Q 003963 663 TKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAAIVESC 742 (783)
Q Consensus 663 ~~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~l~~LI~~c 742 (783)
....+||+.|+|||++.+..++.++|||||||++|+|++|+.||...+.......+. .....+|..+++++.+||.+|
T Consensus 158 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~~~~~~i~--~~~~~~~~~~~~~~~~li~~~ 235 (324)
T cd05587 158 TRTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDELFQSIM--EHNVSYPKSLSKEAVSICKGL 235 (324)
T ss_pred eeeecCCccccChhhhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHH--cCCCCCCCCCCHHHHHHHHHH
Confidence 335578999999999999999999999999999999999999999888777666653 344567788999999999999
Q ss_pred hhhCCCCCCCH-----HHHHHHHHHHHHHHhhc
Q 003963 743 WHSDPQCRPSF-----QELVDKLRDLQRQYFQA 770 (783)
Q Consensus 743 L~~dP~~RPsa-----~ell~~L~~L~~~~f~~ 770 (783)
|.+||.+|++. .++ +.|+||+.
T Consensus 236 l~~~P~~R~~~~~~~~~~~------~~hp~~~~ 262 (324)
T cd05587 236 LTKHPAKRLGCGPTGERDI------REHAFFRR 262 (324)
T ss_pred hhcCHHHcCCCCCCCHHHH------hcCCCcCC
Confidence 99999999976 555 56677754
No 53
>PHA02988 hypothetical protein; Provisional
Probab=100.00 E-value=1.3e-39 Score=348.93 Aligned_cols=248 Identities=24% Similarity=0.446 Sum_probs=214.1
Q ss_pred eeeccCCcEEEEEEEEeCCceEEEEEEecccCC-HHHHHHHHHHHHHHHhCCCCceeeEeceeec----CCceEEEEEec
Q 003963 511 EQIGQGSCGTVYHAVWYGSQDVAVKVFSRQEYS-DEVIHSFRQEVSLMKRLRHPNVLLFMGAVTS----PQRLCIVTEFL 585 (783)
Q Consensus 511 ~~LG~G~fG~Vy~a~~~~~~~vAiK~i~~~~~~-~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~----~~~~~lV~E~~ 585 (783)
..||+|++|.||+|.+ .++.||||++...... ....+.+.+|+.+|+.++|||||++++++.+ ...+++||||+
T Consensus 26 ~~i~~g~~~~v~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~g~~~~~~~~~~~~~lv~Ey~ 104 (283)
T PHA02988 26 VLIKENDQNSIYKGIF-NNKEVIIRTFKKFHKGHKVLIDITENEIKNLRRIDSNNILKIYGFIIDIVDDLPRLSLILEYC 104 (283)
T ss_pred eEEeeCCceEEEEEEE-CCEEEEEEeccccccccHHHHHHHHHHHHHHHhcCCCCEEEEeeeEEecccCCCceEEEEEeC
Confidence 5689999999999987 4678999998765433 3445778899999999999999999999876 34689999999
Q ss_pred CCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhC-CCCEEecCCCCCCEEEcCCCcEEEEecCCCccccccccccc
Q 003963 586 PRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHC-NPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETYLTTK 664 (783)
Q Consensus 586 ~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~-~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~~~~~ 664 (783)
++|+|.+++... ..+++...+.++.+++.||.|||+. + ++||||||+|||++.++.+||+|||++...... ..
T Consensus 105 ~~g~L~~~l~~~-~~~~~~~~~~i~~~i~~~l~~lH~~~~--~~Hrdlkp~nill~~~~~~kl~dfg~~~~~~~~---~~ 178 (283)
T PHA02988 105 TRGYLREVLDKE-KDLSFKTKLDMAIDCCKGLYNLYKYTN--KPYKNLTSVSFLVTENYKLKIICHGLEKILSSP---PF 178 (283)
T ss_pred CCCcHHHHHhhC-CCCChhHHHHHHHHHHHHHHHHHhcCC--CCCCcCChhhEEECCCCcEEEcccchHhhhccc---cc
Confidence 999999999764 4688999999999999999999984 6 889999999999999999999999998754432 12
Q ss_pred CCCCCCcccCcccccC--CCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhcccccccCCCCCCHHHHHHHHHh
Q 003963 665 TGKGTPQWMAPEVLRN--EPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAAIVESC 742 (783)
Q Consensus 665 ~~~Gt~~Y~aPE~~~~--~~~s~~sDIwSLG~il~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~l~~LI~~c 742 (783)
...|+..|+|||++.+ ..++.++|||||||++|||++|..||...+..+....+........++..+++.+.+||.+|
T Consensus 179 ~~~~~~~y~aPE~~~~~~~~~~~k~Di~SlGvil~el~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~li~~c 258 (283)
T PHA02988 179 KNVNFMVYFSYKMLNDIFSEYTIKDDIYSLGVVLWEIFTGKIPFENLTTKEIYDLIINKNNSLKLPLDCPLEIKCIVEAC 258 (283)
T ss_pred cccCcccccCHHHhhhccccccchhhhhHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcCCCCCCCCcCcHHHHHHHHHH
Confidence 4568899999999976 67899999999999999999999999988877776666445556667777899999999999
Q ss_pred hhhCCCCCCCHHHHHHHHHHHHH
Q 003963 743 WHSDPQCRPSFQELVDKLRDLQR 765 (783)
Q Consensus 743 L~~dP~~RPsa~ell~~L~~L~~ 765 (783)
|+.||.+|||+.++++.|+.++.
T Consensus 259 l~~dp~~Rps~~ell~~l~~~~~ 281 (283)
T PHA02988 259 TSHDSIKRPNIKEILYNLSLYKF 281 (283)
T ss_pred hcCCcccCcCHHHHHHHHHHHHh
Confidence 99999999999999999987754
No 54
>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in
Probab=100.00 E-value=4.4e-40 Score=359.06 Aligned_cols=249 Identities=24% Similarity=0.402 Sum_probs=212.7
Q ss_pred eeeccCCcEEEEEEEEe----CCceEEEEEEecccCC--HHHHHHHHHHHHHHHhCCCCceeeEeceeecCCceEEEEEe
Q 003963 511 EQIGQGSCGTVYHAVWY----GSQDVAVKVFSRQEYS--DEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIVTEF 584 (783)
Q Consensus 511 ~~LG~G~fG~Vy~a~~~----~~~~vAiK~i~~~~~~--~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lV~E~ 584 (783)
++||+|+||.||++... .++.||||++...... ......+..|+.+++.++||||+++++++..++.+|+||||
T Consensus 2 ~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~e~ 81 (323)
T cd05584 2 KVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKHPFIVDLIYAFQTGGKLYLILEY 81 (323)
T ss_pred ceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhCCCCchhceeeEEecCCeEEEEEeC
Confidence 67999999999999863 3467999999765322 23345677899999999999999999999999999999999
Q ss_pred cCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCccccccccccc
Q 003963 585 LPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETYLTTK 664 (783)
Q Consensus 585 ~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~~~~~ 664 (783)
+++++|.+++... ..+.+..+..++.||+.||.|||+++ |+||||||+||||+.++.+||+|||+++..........
T Consensus 82 ~~~~~L~~~~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~--ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~ 158 (323)
T cd05584 82 LSGGELFMHLERE-GIFMEDTACFYLSEISLALEHLHQQG--IIYRDLKPENILLDAQGHVKLTDFGLCKESIHEGTVTH 158 (323)
T ss_pred CCCchHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCC--eecCCCCHHHeEECCCCCEEEeeCcCCeecccCCCccc
Confidence 9999999999764 35788888999999999999999998 99999999999999999999999999875433333334
Q ss_pred CCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhcccccccCCCCCCHHHHHHHHHhhh
Q 003963 665 TGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAAIVESCWH 744 (783)
Q Consensus 665 ~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~l~~LI~~cL~ 744 (783)
...||+.|+|||++.+..++.++|||||||++|+|++|+.||...+.......+. .....+|..+++.+.+||.+||.
T Consensus 159 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~pf~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~li~~~l~ 236 (323)
T cd05584 159 TFCGTIEYMAPEILMRSGHGKAVDWWSLGALMYDMLTGAPPFTAENRKKTIDKIL--KGKLNLPPYLTPEARDLLKKLLK 236 (323)
T ss_pred ccCCCccccChhhccCCCCCCcceecccHHHHHHHhcCCCCCCCCCHHHHHHHHH--cCCCCCCCCCCHHHHHHHHHHcc
Confidence 4578999999999999889999999999999999999999999888776665553 34566788899999999999999
Q ss_pred hCCCCCC-----CHHHHHHHHHHHHHHHhhc
Q 003963 745 SDPQCRP-----SFQELVDKLRDLQRQYFQA 770 (783)
Q Consensus 745 ~dP~~RP-----sa~ell~~L~~L~~~~f~~ 770 (783)
+||.+|| ++.++ +.|+||+.
T Consensus 237 ~~p~~R~~~~~~~~~~l------~~h~~~~~ 261 (323)
T cd05584 237 RNPSSRLGAGPGDAAEV------QSHPFFRH 261 (323)
T ss_pred cCHhHcCCCCCCCHHHH------hcCCCcCC
Confidence 9999999 78888 56777743
No 55
>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica
Probab=100.00 E-value=3.9e-40 Score=365.17 Aligned_cols=257 Identities=22% Similarity=0.381 Sum_probs=217.3
Q ss_pred cceeEeeeeccCCcEEEEEEEEeC-CceEEEEEEecccC-CHHHHHHHHHHHHHHHhCCCCceeeEeceeecCCceEEEE
Q 003963 505 EDLTIGEQIGQGSCGTVYHAVWYG-SQDVAVKVFSRQEY-SDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIVT 582 (783)
Q Consensus 505 ~~y~i~~~LG~G~fG~Vy~a~~~~-~~~vAiK~i~~~~~-~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lV~ 582 (783)
++|++.+.||+|+||.||+|.+.. ++.||||++..... .......+.+|+.+++.++||||+++++++..++.+|+||
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~ 80 (364)
T cd05599 1 DDFESIKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEADNPWVVKLYYSFQDENYLYLIM 80 (364)
T ss_pred CCceEEEEEEecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCeEEEEE
Confidence 479999999999999999999864 56799999976543 2344567888999999999999999999999999999999
Q ss_pred EecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCcccccccc-
Q 003963 583 EFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETYL- 661 (783)
Q Consensus 583 E~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~~- 661 (783)
|||++|+|.+++... ..+++..+..++.||+.||+|||+++ |+||||||+||||+.++.++|+|||++........
T Consensus 81 E~~~~g~L~~~l~~~-~~l~~~~~~~~~~qi~~aL~~lH~~~--ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~ 157 (364)
T cd05599 81 EYLPGGDMMTLLMKK-DTFTEEETRFYIAETILAIDSIHKLG--YIHRDIKPDNLLLDAKGHIKLSDFGLCTGLKKSHRT 157 (364)
T ss_pred CCCCCcHHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCC--eEeccCCHHHeEECCCCCEEEeecccceeccccccc
Confidence 999999999999764 35899999999999999999999998 99999999999999999999999999864322110
Q ss_pred -------------------------------------cccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCC
Q 003963 662 -------------------------------------TTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKI 704 (783)
Q Consensus 662 -------------------------------------~~~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~elltG~~ 704 (783)
.....+||+.|+|||++.+..++.++|||||||++|+|++|.+
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el~~G~~ 237 (364)
T cd05599 158 EFYRILSHALPSNFLDFISKPMSSKRKAETWKRNRRALAYSTVGTPDYIAPEVFLQTGYNKECDWWSLGVIMYEMLVGYP 237 (364)
T ss_pred cccccccccccccccccccccccccccccchhhcccccccccccCccccCHHHHcCCCCCCeeeeecchhHHHHhhcCCC
Confidence 0113469999999999999999999999999999999999999
Q ss_pred CCCCCChHHHHHHhhcccccccCCC--CCCHHHHHHHHHhhhhCCCCCCC---HHHHHHHHHHHHHHHhhcC
Q 003963 705 PWDNLNSMQVIGAVGFMNQRLEIPK--DVDPRWAAIVESCWHSDPQCRPS---FQELVDKLRDLQRQYFQAS 771 (783)
Q Consensus 705 Pf~~~~~~~~~~~i~~~~~~~~~~~--~~s~~l~~LI~~cL~~dP~~RPs---a~ell~~L~~L~~~~f~~~ 771 (783)
||...+..+....+........++. .+++++.+||.+||. +|.+|++ +.++ ++|+||+..
T Consensus 238 Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~ll~-~p~~R~~~~~~~~l------l~h~~~~~~ 302 (364)
T cd05599 238 PFCSDNPQETYRKIINWKETLQFPDEVPLSPEAKDLIKRLCC-EAERRLGNNGVNEI------KSHPFFKGV 302 (364)
T ss_pred CCCCCCHHHHHHHHHcCCCccCCCCCCCCCHHHHHHHHHHcc-CHhhcCCCCCHHHH------hcCCCcCCC
Confidence 9998887776665543333334443 478999999999996 9999997 8988 678888543
No 56
>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.6e-41 Score=367.37 Aligned_cols=259 Identities=28% Similarity=0.483 Sum_probs=229.7
Q ss_pred cceeEeeeeccCCcEEEEEEEEeCCce-EEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEeceeecCCceEEEEE
Q 003963 505 EDLTIGEQIGQGSCGTVYHAVWYGSQD-VAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIVTE 583 (783)
Q Consensus 505 ~~y~i~~~LG~G~fG~Vy~a~~~~~~~-vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lV~E 583 (783)
+-|.|+..||.|+||.||+|..+.... .|.|++... +.+.+..+.-||+||..+.||+||++++.|+.++.++|+.|
T Consensus 32 d~WeIiGELGDGAFGKVyKA~nket~~lAAaKvIetk--seEELEDylVEIeILa~CdHP~ivkLl~ayy~enkLwiliE 109 (1187)
T KOG0579|consen 32 DHWEIIGELGDGAFGKVYKAVNKETKLLAAAKVIETK--SEEELEDYLVEIEILAECDHPVIVKLLSAYYFENKLWILIE 109 (1187)
T ss_pred HHHHHHhhhcCccchhhhhhhcccchhhhhhhhhccc--chhHHhhhhhhhhhhhcCCChHHHHHHHHHhccCceEEEEe
Confidence 457888999999999999999876543 567776443 45667888999999999999999999999999999999999
Q ss_pred ecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCcccccccccc
Q 003963 584 FLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETYLTT 663 (783)
Q Consensus 584 ~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~~~~ 663 (783)
||.||-+..++-.-+..+.+.++..+++|++.||.|||+++ |||||||..|||++-+|.|+|+|||.+..........
T Consensus 110 FC~GGAVDaimlEL~r~LtE~QIqvvc~q~ldALn~LHs~~--iIHRDLKAGNiL~TldGdirLADFGVSAKn~~t~qkR 187 (1187)
T KOG0579|consen 110 FCGGGAVDAIMLELGRVLTEDQIQVVCYQVLDALNWLHSQN--IIHRDLKAGNILLTLDGDIRLADFGVSAKNKSTRQKR 187 (1187)
T ss_pred ecCCchHhHHHHHhccccchHHHHHHHHHHHHHHHHHhhcc--hhhhhccccceEEEecCcEeeecccccccchhHHhhh
Confidence 99999999998887888999999999999999999999998 9999999999999999999999999987666555556
Q ss_pred cCCCCCCcccCccccc-----CCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhcccc-cccCCCCCCHHHHH
Q 003963 664 KTGKGTPQWMAPEVLR-----NEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQ-RLEIPKDVDPRWAA 737 (783)
Q Consensus 664 ~~~~Gt~~Y~aPE~~~-----~~~~s~~sDIwSLG~il~elltG~~Pf~~~~~~~~~~~i~~~~~-~~~~~~~~s~~l~~ 737 (783)
.++.|||.|||||++. ..+|++++||||||++|.||..+.+|....+++.++..+..... .+..|..|+..+.+
T Consensus 188 DsFIGTPYWMAPEVvmCET~KD~PYDykaDiWSlGITLIEMAqiEPPHhelnpMRVllKiaKSePPTLlqPS~Ws~~F~D 267 (1187)
T KOG0579|consen 188 DSFIGTPYWMAPEVVMCETFKDQPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSEPPTLLQPSHWSRSFSD 267 (1187)
T ss_pred ccccCCcccccchheeeccccCCCchhhhhHHhhhhHHHHHhccCCCccccchHHHHHHHhhcCCCcccCcchhhhHHHH
Confidence 6889999999999865 56789999999999999999999999999999998887765433 44567789999999
Q ss_pred HHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhcCcC
Q 003963 738 IVESCWHSDPQCRPSFQELVDKLRDLQRQYFQASRS 773 (783)
Q Consensus 738 LI~~cL~~dP~~RPsa~ell~~L~~L~~~~f~~~~~ 773 (783)
|+.+||.+||..||++.+| |+|+||++..|
T Consensus 268 fLk~cL~Knp~~Rp~aaql------l~Hpfv~~~~S 297 (1187)
T KOG0579|consen 268 FLKRCLVKNPRNRPPAAQL------LKHPFVQNAPS 297 (1187)
T ss_pred HHHHHHhcCCccCCCHHHH------hhCcccccCCc
Confidence 9999999999999999999 78999987654
No 57
>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien
Probab=100.00 E-value=2.7e-40 Score=360.96 Aligned_cols=249 Identities=26% Similarity=0.473 Sum_probs=213.2
Q ss_pred eeeccCCcEEEEEEEEeC-CceEEEEEEecccCC-HHHHHHHHHHHHHHHhCCCCceeeEeceeecCCceEEEEEecCCC
Q 003963 511 EQIGQGSCGTVYHAVWYG-SQDVAVKVFSRQEYS-DEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIVTEFLPRG 588 (783)
Q Consensus 511 ~~LG~G~fG~Vy~a~~~~-~~~vAiK~i~~~~~~-~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lV~E~~~gg 588 (783)
+.||+|+||.||++.+.. ++.||+|++...... ......+..|+.+++.++||||+++++++...+.+|+||||++++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~~ 80 (325)
T cd05594 1 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGG 80 (325)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCCceEEEEEcCCEEEEEEeCCCCC
Confidence 469999999999999754 567999999865432 234566778999999999999999999999999999999999999
Q ss_pred CHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHh-CCCCEEecCCCCCCEEEcCCCcEEEEecCCCcccccccccccCCC
Q 003963 589 SLFRLLQRNTTKLDWRRRILMALDIARGVSYLHH-CNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETYLTTKTGK 667 (783)
Q Consensus 589 sL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~-~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~~ 667 (783)
+|..++... ..+++..++.++.||+.||+|||+ .+ |+||||||+||||+.++.+||+|||++..............
T Consensus 81 ~L~~~l~~~-~~l~~~~~~~~~~qi~~aL~~lH~~~~--ivHrDikp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~ 157 (325)
T cd05594 81 ELFFHLSRE-RVFSEDRARFYGAEIVSALDYLHSEKN--VVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTFC 157 (325)
T ss_pred cHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhcCC--EEecCCCCCeEEECCCCCEEEecCCCCeecCCCCccccccc
Confidence 999988754 468999999999999999999997 67 99999999999999999999999999875433323333557
Q ss_pred CCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhcccccccCCCCCCHHHHHHHHHhhhhCC
Q 003963 668 GTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAAIVESCWHSDP 747 (783)
Q Consensus 668 Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~l~~LI~~cL~~dP 747 (783)
||+.|+|||++.+..++.++|||||||+||+|++|..||...+.......+ ......+|..+++++.+||.+||..||
T Consensus 158 gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tG~~Pf~~~~~~~~~~~i--~~~~~~~p~~~~~~~~~li~~~L~~dP 235 (325)
T cd05594 158 GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELI--LMEEIRFPRTLSPEAKSLLSGLLKKDP 235 (325)
T ss_pred CCcccCCHHHHccCCCCCccccccccceeeeeccCCCCCCCCCHHHHHHHH--hcCCCCCCCCCCHHHHHHHHHHhhcCH
Confidence 999999999999999999999999999999999999999887776665554 234556778899999999999999999
Q ss_pred CCCC-----CHHHHHHHHHHHHHHHhhc
Q 003963 748 QCRP-----SFQELVDKLRDLQRQYFQA 770 (783)
Q Consensus 748 ~~RP-----sa~ell~~L~~L~~~~f~~ 770 (783)
.+|+ ++.++ ++|+||+.
T Consensus 236 ~~R~~~~~~~~~~i------l~h~~~~~ 257 (325)
T cd05594 236 KQRLGGGPDDAKEI------MQHKFFAG 257 (325)
T ss_pred HHhCCCCCCCHHHH------hcCCCcCC
Confidence 9996 89999 56777754
No 58
>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]
Probab=100.00 E-value=1.6e-40 Score=341.18 Aligned_cols=260 Identities=23% Similarity=0.308 Sum_probs=217.7
Q ss_pred ccceeEeeeeccCCcEEEEEEEEeCC-ceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEeceeec--CCceEE
Q 003963 504 WEDLTIGEQIGQGSCGTVYHAVWYGS-QDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTS--PQRLCI 580 (783)
Q Consensus 504 ~~~y~i~~~LG~G~fG~Vy~a~~~~~-~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~--~~~~~l 580 (783)
.++|+.++.|++|+||.||+|+++.. +-||+|.++.+.-....--.-.+||.+|.+++|||||.+-.+... -+.+||
T Consensus 75 v~efe~lnrI~EGtyGiVYRakdk~t~eIVALKr~kmekek~GFPItsLREIniLl~~~H~NIV~vkEVVvG~~~d~iy~ 154 (419)
T KOG0663|consen 75 VEEFEKLNRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKEKEGFPITSLREINILLKARHPNIVEVKEVVVGSNMDKIYI 154 (419)
T ss_pred HHHHHHHhhcccCcceeEEEeccCCcceeEEeeecccccccCCCcchhHHHHHHHHhcCCCCeeeeEEEEeccccceeee
Confidence 46789999999999999999998664 569999997765433333456789999999999999999887753 457999
Q ss_pred EEEecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCccccccc
Q 003963 581 VTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETY 660 (783)
Q Consensus 581 V~E~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~ 660 (783)
|||||+. +|..++..-+.++....+..++.|+++||+|||.++ |+||||||+|+|++..|.+||+|||+|+.+..+.
T Consensus 155 VMe~~Eh-DLksl~d~m~q~F~~~evK~L~~QlL~glk~lH~~w--ilHRDLK~SNLLm~~~G~lKiaDFGLAR~ygsp~ 231 (419)
T KOG0663|consen 155 VMEYVEH-DLKSLMETMKQPFLPGEVKTLMLQLLRGLKHLHDNW--ILHRDLKTSNLLLSHKGILKIADFGLAREYGSPL 231 (419)
T ss_pred eHHHHHh-hHHHHHHhccCCCchHHHHHHHHHHHHHHHHHhhce--eEecccchhheeeccCCcEEecccchhhhhcCCc
Confidence 9999976 999999988889999999999999999999999999 9999999999999999999999999999887764
Q ss_pred ccccCCCCCCcccCcccccCCC-CCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhcccccc--------------
Q 003963 661 LTTKTGKGTPQWMAPEVLRNEP-SDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRL-------------- 725 (783)
Q Consensus 661 ~~~~~~~Gt~~Y~aPE~~~~~~-~s~~sDIwSLG~il~elltG~~Pf~~~~~~~~~~~i~~~~~~~-------------- 725 (783)
......+-|..|+|||.+.|.. |+.++|+||+|||+.||+++++-|.+......+..|-...+.+
T Consensus 232 k~~T~lVVTLWYRaPELLLG~~tyst~iDMWSvGCI~aE~l~~kPlf~G~sE~dQl~~If~llGtPte~iwpg~~~lp~~ 311 (419)
T KOG0663|consen 232 KPYTPLVVTLWYRAPELLLGAKTYSTAVDMWSVGCIFAELLTQKPLFPGKSEIDQLDKIFKLLGTPSEAIWPGYSELPAV 311 (419)
T ss_pred ccCcceEEEeeecCHHHhcCCcccCcchhhhhHHHHHHHHHhcCCCCCCCchHHHHHHHHHHhCCCccccCCCccccchh
Confidence 4444556799999999998755 8999999999999999999999999888776665542211100
Q ss_pred ---------------cCCCC-CCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhcCc
Q 003963 726 ---------------EIPKD-VDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQASR 772 (783)
Q Consensus 726 ---------------~~~~~-~s~~l~~LI~~cL~~dP~~RPsa~ell~~L~~L~~~~f~~~~ 772 (783)
.++.. ++..-.+|+..+|..||.+|.|+.+. |.|.||....
T Consensus 312 k~~~f~~~pyn~lr~kF~~~~lse~g~~Lln~llt~dP~kR~tA~~~------L~h~~F~e~P 368 (419)
T KOG0663|consen 312 KKMTFSEHPYNNLRKKFGALSLSEQGFDLLNKLLTYDPGKRITAEDG------LKHEYFRETP 368 (419)
T ss_pred hccccCCCCchhhhhhccccccchhHHHHHHHHhccCccccccHHHh------hcccccccCC
Confidence 01111 45778999999999999999999999 7899996643
No 59
>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po
Probab=100.00 E-value=1.1e-39 Score=364.31 Aligned_cols=256 Identities=21% Similarity=0.317 Sum_probs=212.8
Q ss_pred ceeEeeeeccCCcEEEEEEEEeC-CceEEEEEEecccC-CHHHHHHHHHHHHHHHhCCCCceeeEeceeecCCceEEEEE
Q 003963 506 DLTIGEQIGQGSCGTVYHAVWYG-SQDVAVKVFSRQEY-SDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIVTE 583 (783)
Q Consensus 506 ~y~i~~~LG~G~fG~Vy~a~~~~-~~~vAiK~i~~~~~-~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lV~E 583 (783)
.|++++.||+|+||.||+|.+.. ++.||||++..... .......+.+|+.+++.++|||||++++++.+.+.+|+|||
T Consensus 2 ~f~~~~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~l~~~~~~~~~~~lv~E 81 (381)
T cd05626 2 MFVKIKTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMD 81 (381)
T ss_pred CceEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhcCCCCeeeeEEEEecCCEEEEEEe
Confidence 68999999999999999998765 46799999976543 33456778999999999999999999999999999999999
Q ss_pred ecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCccccccc---
Q 003963 584 FLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETY--- 660 (783)
Q Consensus 584 ~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~--- 660 (783)
||++|+|.+++... ..+++..+..++.||+.||.|||+.+ |+||||||+||||+.++++||+|||++.......
T Consensus 82 ~~~gg~L~~~l~~~-~~~~e~~~~~~~~qi~~aL~~LH~~g--ivHrDlKp~Nili~~~~~~kL~DFGl~~~~~~~~~~~ 158 (381)
T cd05626 82 YIPGGDMMSLLIRM-EVFPEVLARFYIAELTLAIESVHKMG--FIHRDIKPDNILIDLDGHIKLTDFGLCTGFRWTHNSK 158 (381)
T ss_pred cCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCC--eeecCCcHHHEEECCCCCEEEeeCcCCcccccccccc
Confidence 99999999999764 35889999999999999999999998 9999999999999999999999999875321000
Q ss_pred --------------------------------------------ccccCCCCCCcccCcccccCCCCCchhHHHHHHHHH
Q 003963 661 --------------------------------------------LTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVIL 696 (783)
Q Consensus 661 --------------------------------------------~~~~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il 696 (783)
......+||+.|+|||++.+..++.++|||||||++
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlG~il 238 (381)
T cd05626 159 YYQKGSHIRQDSMEPSDLWDDVSNCRCGDRLKTLEQRATKQHQRCLAHSLVGTPNYIAPEVLLRKGYTQLCDWWSVGVIL 238 (381)
T ss_pred cccccccccccccCcccccccccccccccccchhhccccccccccccccccCCccccCHHHHcCCCCCCccceeehhhHH
Confidence 001234799999999999999899999999999999
Q ss_pred HHHHcCCCCCCCCChHHHHHHhhcccccccCC--CCCCHHHHHHHHHhh--hhCCCCCCCHHHHHHHHHHHHHHHhhc
Q 003963 697 WELATEKIPWDNLNSMQVIGAVGFMNQRLEIP--KDVDPRWAAIVESCW--HSDPQCRPSFQELVDKLRDLQRQYFQA 770 (783)
Q Consensus 697 ~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~~--~~~s~~l~~LI~~cL--~~dP~~RPsa~ell~~L~~L~~~~f~~ 770 (783)
|||++|..||...+.......+........++ ..+++++.+||.+|+ ..++..||++.++ +.|+||+.
T Consensus 239 ~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~dli~~ll~~~~~~~~R~~~~~~------l~hp~f~~ 310 (381)
T cd05626 239 FEMLVGQPPFLAPTPTETQLKVINWENTLHIPPQVKLSPEAVDLITKLCCSAEERLGRNGADDI------KAHPFFSE 310 (381)
T ss_pred HHHHhCCCCCcCCCHHHHHHHHHccccccCCCCCCCCCHHHHHHHHHHccCcccccCCCCHHHH------hcCcccCC
Confidence 99999999998877655544443223333333 358999999999954 5566669999999 67899865
No 60
>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal
Probab=100.00 E-value=6e-40 Score=357.63 Aligned_cols=256 Identities=27% Similarity=0.390 Sum_probs=214.7
Q ss_pred eeeccCCcEEEEEEEEeC-CceEEEEEEecccC-CHHHHHHHHHHHHHHHhC-CCCceeeEeceeecCCceEEEEEecCC
Q 003963 511 EQIGQGSCGTVYHAVWYG-SQDVAVKVFSRQEY-SDEVIHSFRQEVSLMKRL-RHPNVLLFMGAVTSPQRLCIVTEFLPR 587 (783)
Q Consensus 511 ~~LG~G~fG~Vy~a~~~~-~~~vAiK~i~~~~~-~~~~~~~~~~Ei~il~~l-~HpnIv~l~~~~~~~~~~~lV~E~~~g 587 (783)
+.||+|+||.||+|.+.. ++.||||++.+... .......+..|+.++..+ +||||+++++++...+.+|+||||+++
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~~~iv~Ey~~~ 80 (320)
T cd05590 1 RVLGKGSFGKVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLYCCFQTPDRLFFVMEFVNG 80 (320)
T ss_pred CeeeeCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhccCCCchhceeeEEEcCCEEEEEEcCCCC
Confidence 469999999999999865 46799999876532 223456677888888876 699999999999999999999999999
Q ss_pred CCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCcccccccccccCCC
Q 003963 588 GSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETYLTTKTGK 667 (783)
Q Consensus 588 gsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~~ 667 (783)
++|.+++... ..+++..++.++.||+.||.|||+++ |+||||||+|||++.++.+||+|||++..............
T Consensus 81 g~L~~~i~~~-~~l~~~~~~~~~~ql~~~L~~lH~~~--ivH~dlkp~NIli~~~~~~kL~DfG~~~~~~~~~~~~~~~~ 157 (320)
T cd05590 81 GDLMFHIQKS-RRFDEARARFYAAEITSALMFLHDKG--IIYRDLKLDNVLLDHEGHCKLADFGMCKEGIFNGKTTSTFC 157 (320)
T ss_pred chHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCC--eEeCCCCHHHeEECCCCcEEEeeCCCCeecCcCCCcccccc
Confidence 9999998764 46899999999999999999999998 99999999999999999999999999875433323334567
Q ss_pred CCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhcccccccCCCCCCHHHHHHHHHhhhhCC
Q 003963 668 GTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAAIVESCWHSDP 747 (783)
Q Consensus 668 Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~l~~LI~~cL~~dP 747 (783)
||+.|+|||++.+..++.++|||||||++|+|++|+.||...+.......+. .....++..+++++.+||.+||+.||
T Consensus 158 gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~i~--~~~~~~~~~~~~~~~~li~~~L~~dP 235 (320)
T cd05590 158 GTPDYIAPEILQEMLYGPSVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAIL--NDEVVYPTWLSQDAVDILKAFMTKNP 235 (320)
T ss_pred cCccccCHHHHcCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHHHHHHHHh--cCCCCCCCCCCHHHHHHHHHHcccCH
Confidence 9999999999999999999999999999999999999999888777766653 34456677899999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHhhcC
Q 003963 748 QCRPSFQELVDKLRDLQRQYFQAS 771 (783)
Q Consensus 748 ~~RPsa~ell~~L~~L~~~~f~~~ 771 (783)
.+||++.++...-+-+.|+||+..
T Consensus 236 ~~R~~~~~~~~~~~~~~h~~f~~~ 259 (320)
T cd05590 236 TMRLGSLTLGGEEAILRHPFFKEL 259 (320)
T ss_pred HHCCCCCCCCCHHHHHcCCCcCCC
Confidence 999998333222222688998654
No 61
>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2. Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=4.7e-39 Score=352.24 Aligned_cols=258 Identities=23% Similarity=0.370 Sum_probs=214.1
Q ss_pred cccceeEeeeeccCCcEEEEEEEEeC-CceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEeceeecCCceEEE
Q 003963 503 LWEDLTIGEQIGQGSCGTVYHAVWYG-SQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIV 581 (783)
Q Consensus 503 ~~~~y~i~~~LG~G~fG~Vy~a~~~~-~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lV 581 (783)
..++|++.+.||+|+||.||++.+.. +..||+|++.... .......+.+|+++++.++||||+++++++..++.+++|
T Consensus 3 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 81 (331)
T cd06649 3 KDDDFERISELGAGNGGVVTKVQHKPSGLIMARKLIHLEI-KPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISIC 81 (331)
T ss_pred CcccceEEEeecCCCCEEEEEEEECCCCcEEEEEEeeccc-CHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEE
Confidence 45789999999999999999999875 4568999886543 345567899999999999999999999999999999999
Q ss_pred EEecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCcccccccc
Q 003963 582 TEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETYL 661 (783)
Q Consensus 582 ~E~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~~ 661 (783)
|||+++++|.+++... ..+++..+..++.|++.||.|||+.+ +|+||||||+|||++.++.+||+|||++......
T Consensus 82 ~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~-~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~-- 157 (331)
T cd06649 82 MEHMDGGSLDQVLKEA-KRIPEEILGKVSIAVLRGLAYLREKH-QIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS-- 157 (331)
T ss_pred eecCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHhhcC-CEEcCCCChhhEEEcCCCcEEEccCccccccccc--
Confidence 9999999999999764 35889999999999999999999852 2999999999999999999999999998755432
Q ss_pred cccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhcc--------------------
Q 003963 662 TTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFM-------------------- 721 (783)
Q Consensus 662 ~~~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~elltG~~Pf~~~~~~~~~~~i~~~-------------------- 721 (783)
......|++.|+|||++.+..++.++|||||||++|+|++|+.||...+.......+...
T Consensus 158 ~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (331)
T cd06649 158 MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVELAIGRYPIPPPDAKELEAIFGRPVVDGEEGEPHSISPRPRPPG 237 (331)
T ss_pred ccccCCCCcCcCCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhcccccccccCCccccCccccccc
Confidence 223456899999999999999999999999999999999999999766554432221100
Q ss_pred -------------------------cccccC-CCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhcC
Q 003963 722 -------------------------NQRLEI-PKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQAS 771 (783)
Q Consensus 722 -------------------------~~~~~~-~~~~s~~l~~LI~~cL~~dP~~RPsa~ell~~L~~L~~~~f~~~ 771 (783)
...... ...+++++++||.+||+.||++|||+.++ +.|+||+..
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~~P~~Rpt~~el------l~h~~~~~~ 307 (331)
T cd06649 238 RPVSGHGMDSRPAMAIFELLDYIVNEPPPKLPNGVFTPDFQEFVNKCLIKNPAERADLKML------MNHTFIKRS 307 (331)
T ss_pred ccccccccccccchhHHHHHHHHHhCCCcCCCCccccHHHHHHHHHHccCCcccCCCHHHH------hcChHHhhc
Confidence 000111 12467899999999999999999999999 678888654
No 62
>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]
Probab=100.00 E-value=1.5e-39 Score=372.63 Aligned_cols=261 Identities=23% Similarity=0.444 Sum_probs=216.8
Q ss_pred ccccccccceeEeeeeccCCcEEEEEEEEeCC-ceEEEEEEecccCCHHHHHHHHHHHHHHHhCC-CCceeeEec-eeec
Q 003963 498 LDYEILWEDLTIGEQIGQGSCGTVYHAVWYGS-QDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLR-HPNVLLFMG-AVTS 574 (783)
Q Consensus 498 ~~~e~~~~~y~i~~~LG~G~fG~Vy~a~~~~~-~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~-HpnIv~l~~-~~~~ 574 (783)
..+++..-+++|.++|.+|||+.||+|.+..+ .+||+|.+... ++..+..+.+||++|+.|+ |+|||.|++ ....
T Consensus 30 ~~~~Vg~~~v~V~~vLAEGGFa~VYla~~~~~~~~~AlKrm~~~--de~~L~~v~~EI~~MK~L~gh~nIV~yidss~~~ 107 (738)
T KOG1989|consen 30 QTFTVGSHRVTVEKVLAEGGFAQVYLAQDVKGGKKYALKRMYVN--DEEALNAVKREIDIMKLLSGHKNIVSYIDSSAIN 107 (738)
T ss_pred eEEEECCEEEEEEEEEccCCcEEEEEEEecCCCceeeeeeeecC--CHHHHHHHHHHHHHHHHhcCCCceeeEecccccc
Confidence 34456667899999999999999999998776 89999998765 5677889999999999997 999999999 3321
Q ss_pred ---C---CceEEEEEecCCCCHHHHHhh-cCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEE
Q 003963 575 ---P---QRLCIVTEFLPRGSLFRLLQR-NTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKV 647 (783)
Q Consensus 575 ---~---~~~~lV~E~~~ggsL~~~L~~-~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL 647 (783)
+ -.++|+||||.||.|.+++.. ....|++..+++|++++++|+++||.+..+|||||||-+||||+.+|++||
T Consensus 108 ~~~~~~~~EvllLmEyC~gg~Lvd~mn~Rlq~~lte~eVLkIf~dv~~AVa~mH~~~pPiIHRDLKiENvLls~~g~~KL 187 (738)
T KOG1989|consen 108 RSSNNGVWEVLLLMEYCKGGSLVDFMNTRLQTRLTEDEVLKIFYDVCEAVAAMHYLKPPIIHRDLKIENVLLSADGNYKL 187 (738)
T ss_pred ccCCCceeEEEeehhhccCCcHHHHHHHHHhccCChHHHHHHHHHHHHHHHHHhcCCCccchhhhhhhheEEcCCCCEEe
Confidence 1 247899999999999999963 334599999999999999999999999999999999999999999999999
Q ss_pred EecCCCcccccccccc---------cCCCCCCcccCcccc---cCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHH
Q 003963 648 GDFGLSRLKHETYLTT---------KTGKGTPQWMAPEVL---RNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVI 715 (783)
Q Consensus 648 ~DFGla~~~~~~~~~~---------~~~~Gt~~Y~aPE~~---~~~~~s~~sDIwSLG~il~elltG~~Pf~~~~~~~~~ 715 (783)
||||.+.......... ....-|+.|+|||++ .+...++|+|||+|||+||-||....||+.....
T Consensus 188 CDFGSatt~~~~~~~~~e~~~ve~eI~k~TTp~YRsPEMIDlysg~pI~eKsDIWALGclLYkLCy~t~PFe~sg~l--- 264 (738)
T KOG1989|consen 188 CDFGSATTKILSPTSAQEVNYVEEEIEKYTTPQYRSPEMIDLYSGLPIGEKSDIWALGCLLYKLCYFTTPFEESGKL--- 264 (738)
T ss_pred CcccccccccCCCccHHHHHHHHHHHHhhCCccccChHHHhhhcCCCCcchhHHHHHHHHHHHHHHhCCCcCcCcce---
Confidence 9999986433221110 011248999999986 5788899999999999999999999999875332
Q ss_pred HHhhcccccccCC--CCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHH
Q 003963 716 GAVGFMNQRLEIP--KDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQ 766 (783)
Q Consensus 716 ~~i~~~~~~~~~~--~~~s~~l~~LI~~cL~~dP~~RPsa~ell~~L~~L~~~ 766 (783)
.| ++..+.+| +.++..+.+||+.||+.||.+||++-+++..+-+|+..
T Consensus 265 -aI--lng~Y~~P~~p~ys~~l~~LI~~mL~~nP~~RPnI~Qv~~~~~~l~~~ 314 (738)
T KOG1989|consen 265 -AI--LNGNYSFPPFPNYSDRLKDLIRTMLQPNPDERPNIYQVLEEIFELANK 314 (738)
T ss_pred -eE--EeccccCCCCccHHHHHHHHHHHHhccCcccCCCHHHHHHHHHHHhcC
Confidence 23 44444444 57899999999999999999999999999998877643
No 63
>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of
Probab=100.00 E-value=7.4e-40 Score=364.98 Aligned_cols=256 Identities=22% Similarity=0.357 Sum_probs=213.9
Q ss_pred cceeEeeeeccCCcEEEEEEEEeC-CceEEEEEEecccC-CHHHHHHHHHHHHHHHhCCCCceeeEeceeecCCceEEEE
Q 003963 505 EDLTIGEQIGQGSCGTVYHAVWYG-SQDVAVKVFSRQEY-SDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIVT 582 (783)
Q Consensus 505 ~~y~i~~~LG~G~fG~Vy~a~~~~-~~~vAiK~i~~~~~-~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lV~ 582 (783)
++|+++++||+|+||.||++.+.. ++.||||++.+... .......+.+|+.+++.++|||||++++++..+..+|+||
T Consensus 1 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~ 80 (377)
T cd05629 1 EDFHTVKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAESDSPWVVSLYYSFQDAQYLYLIM 80 (377)
T ss_pred CCceEeEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCeeEEEE
Confidence 479999999999999999998764 56799999876432 3345567889999999999999999999999999999999
Q ss_pred EecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCcccccccc-
Q 003963 583 EFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETYL- 661 (783)
Q Consensus 583 E~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~~- 661 (783)
||+++|+|.+++... ..+++..+..++.||+.||+|||+++ |+||||||+|||++.++.+||+|||+++.......
T Consensus 81 E~~~gg~L~~~l~~~-~~~~~~~~~~~~~ql~~aL~~LH~~g--ivHrDlkp~NIll~~~~~~kl~DfGla~~~~~~~~~ 157 (377)
T cd05629 81 EFLPGGDLMTMLIKY-DTFSEDVTRFYMAECVLAIEAVHKLG--FIHRDIKPDNILIDRGGHIKLSDFGLSTGFHKQHDS 157 (377)
T ss_pred eCCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCC--eeccCCCHHHEEECCCCCEEEeeccccccccccccc
Confidence 999999999999764 46889999999999999999999999 99999999999999999999999999863211000
Q ss_pred ----------------------------------------------cccCCCCCCcccCcccccCCCCCchhHHHHHHHH
Q 003963 662 ----------------------------------------------TTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVI 695 (783)
Q Consensus 662 ----------------------------------------------~~~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~i 695 (783)
.....+||+.|+|||++.+..++.++|||||||+
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvi 237 (377)
T cd05629 158 AYYQKLLQGKSNKNRIDNRNSVAVDSINLTMSSKDQIATWKKNRRLMAYSTVGTPDYIAPEIFLQQGYGQECDWWSLGAI 237 (377)
T ss_pred ccccccccccccccccccccccccccccccccchhhhhhhhhcccccccccCCCccccCHHHHccCCCCCceeeEecchh
Confidence 0012469999999999999999999999999999
Q ss_pred HHHHHcCCCCCCCCChHHHHHHhhcccccccCCC--CCCHHHHHHHHHhhhhCCCCC---CCHHHHHHHHHHHHHHHhhc
Q 003963 696 LWELATEKIPWDNLNSMQVIGAVGFMNQRLEIPK--DVDPRWAAIVESCWHSDPQCR---PSFQELVDKLRDLQRQYFQA 770 (783)
Q Consensus 696 l~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~--~~s~~l~~LI~~cL~~dP~~R---Psa~ell~~L~~L~~~~f~~ 770 (783)
||||++|.+||...+....+..+........+|. .++.++.+||.+||. +|.+| +++.++ +.|+||+.
T Consensus 238 l~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~dli~~lL~-~~~~r~~r~~~~~~------l~hp~~~~ 310 (377)
T cd05629 238 MFECLIGWPPFCSENSHETYRKIINWRETLYFPDDIHLSVEAEDLIRRLIT-NAENRLGRGGAHEI------KSHPFFRG 310 (377)
T ss_pred hhhhhcCCCCCCCCCHHHHHHHHHccCCccCCCCCCCCCHHHHHHHHHHhc-CHhhcCCCCCHHHH------hcCCCcCC
Confidence 9999999999988777666555543333344443 478999999999997 67765 599999 67888864
No 64
>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate
Probab=100.00 E-value=2.7e-40 Score=359.75 Aligned_cols=253 Identities=24% Similarity=0.412 Sum_probs=213.3
Q ss_pred eeeccCCcEEEEEEEEe----CCceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEeceeecCCceEEEEEecC
Q 003963 511 EQIGQGSCGTVYHAVWY----GSQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIVTEFLP 586 (783)
Q Consensus 511 ~~LG~G~fG~Vy~a~~~----~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lV~E~~~ 586 (783)
+.||+|+||.||++.+. .++.||+|++............+.+|+.+++.++||||+++++++..++.+|+||||++
T Consensus 2 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 81 (318)
T cd05582 2 KVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLKVRDRVRTKMERDILAEVNHPFIVKLHYAFQTEGKLYLILDFLR 81 (318)
T ss_pred ceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhCCCCCcccEEEEEEcCCEEEEEEcCCC
Confidence 57999999999999863 34679999998755444444567789999999999999999999999999999999999
Q ss_pred CCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCcccccccccccCC
Q 003963 587 RGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETYLTTKTG 666 (783)
Q Consensus 587 ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~ 666 (783)
+++|.+++.+. ..+++..++.++.||+.||+|||+++ |+||||||+|||++.++.+||+|||++.............
T Consensus 82 ~~~L~~~l~~~-~~l~~~~~~~~~~qi~~~l~~lH~~~--i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~~~~~~~ 158 (318)
T cd05582 82 GGDLFTRLSKE-VMFTEEDVKFYLAELALALDHLHSLG--IIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSF 158 (318)
T ss_pred CCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCC--EecCCCCHHHeEECCCCcEEEeeccCCcccCCCCCceecc
Confidence 99999999754 45899999999999999999999998 9999999999999999999999999987654443334456
Q ss_pred CCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhcccccccCCCCCCHHHHHHHHHhhhhC
Q 003963 667 KGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAAIVESCWHSD 746 (783)
Q Consensus 667 ~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~l~~LI~~cL~~d 746 (783)
.|++.|+|||++.+..++.++|||||||++|+|++|+.||...+.......+. .....+|..+++.+.+||.+||+.|
T Consensus 159 ~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~i~--~~~~~~p~~~~~~~~~li~~~l~~~ 236 (318)
T cd05582 159 CGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGSLPFQGKDRKETMTMIL--KAKLGMPQFLSPEAQSLLRALFKRN 236 (318)
T ss_pred cCChhhcCHHHHcCCCCCCccceeccceEeeeeccCCCCCCCCCHHHHHHHHH--cCCCCCCCCCCHHHHHHHHHHhhcC
Confidence 78999999999999889999999999999999999999999887776665553 3445677889999999999999999
Q ss_pred CCCCCCHHHH-HHHHHHHHHHHhhc
Q 003963 747 PQCRPSFQEL-VDKLRDLQRQYFQA 770 (783)
Q Consensus 747 P~~RPsa~el-l~~L~~L~~~~f~~ 770 (783)
|.+||++.+. ++.+ +.|+||+.
T Consensus 237 P~~R~~a~~~~~~~~--~~~~~~~~ 259 (318)
T cd05582 237 PANRLGAGPDGVEEI--KRHPFFST 259 (318)
T ss_pred HhHcCCCCCCCHHHH--hCCCCcCC
Confidence 9999995441 1111 45666643
No 65
>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos
Probab=100.00 E-value=2.9e-39 Score=353.64 Aligned_cols=260 Identities=25% Similarity=0.387 Sum_probs=208.3
Q ss_pred ceeEeeeeccCCcEEEEEEEEeC-CceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEeceeecC-----CceE
Q 003963 506 DLTIGEQIGQGSCGTVYHAVWYG-SQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSP-----QRLC 579 (783)
Q Consensus 506 ~y~i~~~LG~G~fG~Vy~a~~~~-~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~-----~~~~ 579 (783)
+|++.++||+|+||.||+|.+.. ++.||||++............+.+|+.+++.++||||+++++++... ..+|
T Consensus 1 ry~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~ 80 (338)
T cd07859 1 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKDIY 80 (338)
T ss_pred CeEEEEEEeecCCeEEEEEEECCCCCEEEEEEechhhccchhHHHHHHHHHHHHhCCCCCEeeecceEeccCCCCCceEE
Confidence 58999999999999999999764 57899999875433333445788999999999999999999987543 2479
Q ss_pred EEEEecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCcccccc
Q 003963 580 IVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHET 659 (783)
Q Consensus 580 lV~E~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~~~ 659 (783)
+|||||. ++|.+++... ..+++..+..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++.....
T Consensus 81 lv~e~~~-~~L~~~l~~~-~~~~~~~~~~i~~qi~~aL~~LH~~~--ivH~dlkp~NIll~~~~~~kL~Dfg~~~~~~~~ 156 (338)
T cd07859 81 VVFELME-SDLHQVIKAN-DDLTPEHHQFFLYQLLRALKYIHTAN--VFHRDLKPKNILANADCKLKICDFGLARVAFND 156 (338)
T ss_pred EEEecCC-CCHHHHHHhc-ccCCHHHHHHHHHHHHHHHHHHHHCC--eecCCCCHHHeEECCCCcEEEccCccccccccc
Confidence 9999994 6899988764 35899999999999999999999998 999999999999999999999999998754322
Q ss_pred c---ccccCCCCCCcccCcccccC--CCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhcc-------------
Q 003963 660 Y---LTTKTGKGTPQWMAPEVLRN--EPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFM------------- 721 (783)
Q Consensus 660 ~---~~~~~~~Gt~~Y~aPE~~~~--~~~s~~sDIwSLG~il~elltG~~Pf~~~~~~~~~~~i~~~------------- 721 (783)
. .......||+.|+|||++.+ ..++.++|||||||++|+|++|++||...+.......+...
T Consensus 157 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DvwSlGvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 236 (338)
T cd07859 157 TPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLITDLLGTPSPETISRVR 236 (338)
T ss_pred cCccccccCCCCCCCcCCHHHHhccccccCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhh
Confidence 1 11234578999999999876 56889999999999999999999999776543322211000
Q ss_pred -----------cccc-----cCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhcCcCCC
Q 003963 722 -----------NQRL-----EIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQASRSTV 775 (783)
Q Consensus 722 -----------~~~~-----~~~~~~s~~l~~LI~~cL~~dP~~RPsa~ell~~L~~L~~~~f~~~~~~~ 775 (783)
.... .....+++.+.+||.+||..||++||++.++ +.|+||+......
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~e~------l~hp~f~~~~~~~ 300 (338)
T cd07859 237 NEKARRYLSSMRKKQPVPFSQKFPNADPLALRLLERLLAFDPKDRPTAEEA------LADPYFKGLAKVE 300 (338)
T ss_pred hhhHHHHHHhhcccCCCchHHhcCCCChHHHHHHHHHcCcCcccCCCHHHH------hcCchhhhcCccc
Confidence 0000 0113467889999999999999999999999 6789997766543
No 66
>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and
Probab=100.00 E-value=1.4e-39 Score=354.97 Aligned_cols=254 Identities=25% Similarity=0.426 Sum_probs=215.4
Q ss_pred ceeEeeeeccCCcEEEEEEEEeCC-ceEEEEEEecccCC-HHHHHHHHHHHHHHHhC-CCCceeeEeceeecCCceEEEE
Q 003963 506 DLTIGEQIGQGSCGTVYHAVWYGS-QDVAVKVFSRQEYS-DEVIHSFRQEVSLMKRL-RHPNVLLFMGAVTSPQRLCIVT 582 (783)
Q Consensus 506 ~y~i~~~LG~G~fG~Vy~a~~~~~-~~vAiK~i~~~~~~-~~~~~~~~~Ei~il~~l-~HpnIv~l~~~~~~~~~~~lV~ 582 (783)
+|.+.+.||+|+||.||+|.+..+ +.||||++.+.... ......+..|..++..+ +|++|+++++++...+.+|+||
T Consensus 1 df~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (323)
T cd05616 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKPPFLTQLHSCFQTMDRLYFVM 80 (323)
T ss_pred CceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCeEeeEEEEEecCCEEEEEE
Confidence 588999999999999999998654 67999999865432 23345567788888877 5899999999999999999999
Q ss_pred EecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCccccccccc
Q 003963 583 EFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETYLT 662 (783)
Q Consensus 583 E~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~~~ 662 (783)
||+++|+|..++... ..+++..++.++.||+.||+|||+++ |+||||||+|||++.++.+||+|||++.........
T Consensus 81 E~~~~g~L~~~~~~~-~~~~~~~~~~~~~qi~~aL~~LH~~~--ivHrDlkp~Nill~~~~~~kL~DfG~~~~~~~~~~~ 157 (323)
T cd05616 81 EYVNGGDLMYQIQQV-GRFKEPHAVFYAAEIAIGLFFLHSKG--IIYRDLKLDNVMLDSEGHIKIADFGMCKENMWDGVT 157 (323)
T ss_pred cCCCCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCC--EEecCCCHHHeEECCCCcEEEccCCCceecCCCCCc
Confidence 999999999998764 45889999999999999999999998 999999999999999999999999998754433333
Q ss_pred ccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhcccccccCCCCCCHHHHHHHHHh
Q 003963 663 TKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAAIVESC 742 (783)
Q Consensus 663 ~~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~l~~LI~~c 742 (783)
....+||+.|+|||++.+..++.++|||||||++|+|++|+.||...+.......+. .....+|..++.++.+||.+|
T Consensus 158 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~Pf~~~~~~~~~~~i~--~~~~~~p~~~s~~~~~li~~~ 235 (323)
T cd05616 158 TKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIM--EHNVAYPKSMSKEAVAICKGL 235 (323)
T ss_pred cccCCCChhhcCHHHhcCCCCCCccchhchhHHHHHHHhCCCCCCCCCHHHHHHHHH--hCCCCCCCcCCHHHHHHHHHH
Confidence 445679999999999999999999999999999999999999999888777666653 334567788999999999999
Q ss_pred hhhCCCCCCCH-----HHHHHHHHHHHHHHhhc
Q 003963 743 WHSDPQCRPSF-----QELVDKLRDLQRQYFQA 770 (783)
Q Consensus 743 L~~dP~~RPsa-----~ell~~L~~L~~~~f~~ 770 (783)
|+.||.+|++. .++ +.|+||+.
T Consensus 236 l~~~p~~R~~~~~~~~~~i------~~h~~~~~ 262 (323)
T cd05616 236 MTKHPGKRLGCGPEGERDI------KEHAFFRY 262 (323)
T ss_pred cccCHHhcCCCCCCCHHHH------hcCCCcCC
Confidence 99999999974 555 46677753
No 67
>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti
Probab=100.00 E-value=2.3e-39 Score=360.82 Aligned_cols=262 Identities=26% Similarity=0.478 Sum_probs=216.2
Q ss_pred ccccccceeEeeeeccCCcEEEEEEEEeC------CceEEEEEEecccCCHHHHHHHHHHHHHHHhC-CCCceeeEecee
Q 003963 500 YEILWEDLTIGEQIGQGSCGTVYHAVWYG------SQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRL-RHPNVLLFMGAV 572 (783)
Q Consensus 500 ~e~~~~~y~i~~~LG~G~fG~Vy~a~~~~------~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l-~HpnIv~l~~~~ 572 (783)
+....++|++.+.||+|+||.||+|.+.. ...||||++..... ......+.+|+.+++.+ +|+|||++++++
T Consensus 33 ~~~~~~~~~~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~il~~l~~h~nIv~~~~~~ 111 (374)
T cd05106 33 WEFPRDNLQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAH-TDEREALMSELKILSHLGQHKNIVNLLGAC 111 (374)
T ss_pred ccccHHHceehheecCCCcccEEEEEEecCCcccccceeEEEeccCCCC-HHHHHHHHHHHHHHHhhccCCceeeEeeEe
Confidence 34556789999999999999999998632 13699999876543 33456788999999999 899999999999
Q ss_pred ecCCceEEEEEecCCCCHHHHHhhcC------------------------------------------------------
Q 003963 573 TSPQRLCIVTEFLPRGSLFRLLQRNT------------------------------------------------------ 598 (783)
Q Consensus 573 ~~~~~~~lV~E~~~ggsL~~~L~~~~------------------------------------------------------ 598 (783)
...+.+++|||||++|+|.+++....
T Consensus 112 ~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (374)
T cd05106 112 THGGPVLVITEYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYIRSDSGFSSQGSDTYVEMRPVSSSS 191 (374)
T ss_pred cCCCCeEEeHhhccCCcHHHHHHhhhhhhccccccccccccccccccccchhcccccccccccccccccccccCCccccc
Confidence 99999999999999999999985421
Q ss_pred ---------------CcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCcccccccc--
Q 003963 599 ---------------TKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETYL-- 661 (783)
Q Consensus 599 ---------------~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~~-- 661 (783)
.++++..++.++.||+.||.|||+++ |+||||||+|||+++++.+||+|||+++.......
T Consensus 192 ~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~g--iiHrDLkp~Nil~~~~~~~kL~DfGla~~~~~~~~~~ 269 (374)
T cd05106 192 SQSSDSKDEEDTEDSWPLDLDDLLRFSSQVAQGMDFLASKN--CIHRDVAARNVLLTDGRVAKICDFGLARDIMNDSNYV 269 (374)
T ss_pred cccccccchhccCCCCCcCHHHHHHHHHHHHHHHHHHHHCC--EEeccCchheEEEeCCCeEEEeeceeeeeccCCccee
Confidence 24678889999999999999999998 99999999999999999999999999875443221
Q ss_pred cccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCChHHHHHHhhcccccccCCCCCCHHHHHHHH
Q 003963 662 TTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELAT-EKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAAIVE 740 (783)
Q Consensus 662 ~~~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~l~~LI~ 740 (783)
......++..|||||++.+..++.++|||||||++|+|++ |+.||.....................+..+++++.++|.
T Consensus 270 ~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt~G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 349 (374)
T cd05106 270 VKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGKSPYPGILVNSKFYKMVKRGYQMSRPDFAPPEIYSIMK 349 (374)
T ss_pred eccCCCCccceeCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCccccccHHHHHHHHcccCccCCCCCCHHHHHHHH
Confidence 1112235678999999998889999999999999999997 999998765544333333333344556678999999999
Q ss_pred HhhhhCCCCCCCHHHHHHHHHHHH
Q 003963 741 SCWHSDPQCRPSFQELVDKLRDLQ 764 (783)
Q Consensus 741 ~cL~~dP~~RPsa~ell~~L~~L~ 764 (783)
+||+.||.+||++.++++.|+++.
T Consensus 350 ~cl~~dp~~RPs~~~l~~~l~~~~ 373 (374)
T cd05106 350 MCWNLEPTERPTFSQISQLIQRQL 373 (374)
T ss_pred HHcCCChhhCcCHHHHHHHHHHHh
Confidence 999999999999999999998763
No 68
>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=6.2e-40 Score=363.54 Aligned_cols=268 Identities=33% Similarity=0.571 Sum_probs=239.2
Q ss_pred cccccccccceeEeeeeccCCcEEEEEEEEeCC----ce-EEEEEEecc-cCCHHHHHHHHHHHHHHHhCCCCceeeEec
Q 003963 497 CLDYEILWEDLTIGEQIGQGSCGTVYHAVWYGS----QD-VAVKVFSRQ-EYSDEVIHSFRQEVSLMKRLRHPNVLLFMG 570 (783)
Q Consensus 497 ~~~~e~~~~~y~i~~~LG~G~fG~Vy~a~~~~~----~~-vAiK~i~~~-~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~ 570 (783)
-..|++..++..+.++||+|+||.||+|..+.. .. ||+|..... ....+...++.+|+++|+.++|||||+|||
T Consensus 149 r~~Wel~H~~v~l~kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l~H~NVVr~yG 228 (474)
T KOG0194|consen 149 RQKWELSHSDIELGKKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSELTKEQIKEFMKEARVMRQLNHPNVVRFYG 228 (474)
T ss_pred ccccEEeccCccccceeecccccEEEEEEEEecCCceeeeeEEEeecccccccHHHHHHHHHHHHHHHhCCCCCEEEEEE
Confidence 356888889999999999999999999987542 23 899998763 356788899999999999999999999999
Q ss_pred eeecCCceEEEEEecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEec
Q 003963 571 AVTSPQRLCIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDF 650 (783)
Q Consensus 571 ~~~~~~~~~lV~E~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DF 650 (783)
++.....+++|||+|+||+|.++|++++..++....+.++.+.+.||+|||+++ +|||||-.+|+|++.++.+||+||
T Consensus 229 Va~~~~Pl~ivmEl~~gGsL~~~L~k~~~~v~~~ek~~~~~~AA~Gl~YLh~k~--~IHRDIAARNcL~~~~~~vKISDF 306 (474)
T KOG0194|consen 229 VAVLEEPLMLVMELCNGGSLDDYLKKNKKSLPTLEKLRFCYDAARGLEYLHSKN--CIHRDIAARNCLYSKKGVVKISDF 306 (474)
T ss_pred EEcCCCccEEEEEecCCCcHHHHHHhCCCCCCHHHHHHHHHHHHhHHHHHHHCC--CcchhHhHHHheecCCCeEEeCcc
Confidence 999999999999999999999999988777999999999999999999999998 999999999999999999999999
Q ss_pred CCCccccccccccc-CCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCChHHHHHHhhcccccccCC
Q 003963 651 GLSRLKHETYLTTK-TGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELAT-EKIPWDNLNSMQVIGAVGFMNQRLEIP 728 (783)
Q Consensus 651 Gla~~~~~~~~~~~-~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~~~~ 728 (783)
|+++... .+.... ...-...|+|||.+....++.++|||||||++||+++ |..||.+....+....+.....+..+|
T Consensus 307 GLs~~~~-~~~~~~~~~klPirWLAPEtl~~~~~s~kTDV~sfGV~~~Eif~~g~~Py~g~~~~~v~~kI~~~~~r~~~~ 385 (474)
T KOG0194|consen 307 GLSRAGS-QYVMKKFLKKLPIRWLAPETLNTGIFSFKTDVWSFGVLLWEIFENGAEPYPGMKNYEVKAKIVKNGYRMPIP 385 (474)
T ss_pred ccccCCc-ceeeccccccCcceecChhhhccCccccccchhheeeeEEeeeccCCCCCCCCCHHHHHHHHHhcCccCCCC
Confidence 9987654 222222 2234679999999999999999999999999999999 888999999998888887677888889
Q ss_pred CCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHH
Q 003963 729 KDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQY 767 (783)
Q Consensus 729 ~~~s~~l~~LI~~cL~~dP~~RPsa~ell~~L~~L~~~~ 767 (783)
...+.++..++..||..+|+.||++.++.+.|+.+....
T Consensus 386 ~~~p~~~~~~~~~c~~~~p~~R~tm~~i~~~l~~~~~~~ 424 (474)
T KOG0194|consen 386 SKTPKELAKVMKQCWKKDPEDRPTMSTIKKKLEALEKKK 424 (474)
T ss_pred CCCHHHHHHHHHHhccCChhhccCHHHHHHHHHHHHhcc
Confidence 999999999999999999999999999999999887663
No 69
>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in
Probab=100.00 E-value=1.2e-39 Score=362.60 Aligned_cols=260 Identities=22% Similarity=0.353 Sum_probs=218.9
Q ss_pred cccccceeEeeeeccCCcEEEEEEEEeC-CceEEEEEEecccCC-HHHHHHHHHHHHHHHhCCCCceeeEeceeecCCce
Q 003963 501 EILWEDLTIGEQIGQGSCGTVYHAVWYG-SQDVAVKVFSRQEYS-DEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRL 578 (783)
Q Consensus 501 e~~~~~y~i~~~LG~G~fG~Vy~a~~~~-~~~vAiK~i~~~~~~-~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~ 578 (783)
....++|++.++||+|+||.||++.+.. ++.||+|++.+.... ......+.+|+.+++.++||||+++++++..+..+
T Consensus 39 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~h~~iv~~~~~~~~~~~~ 118 (370)
T cd05596 39 RMKAEDFDVIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHANSEWIVQLHYAFQDDKYL 118 (370)
T ss_pred CCCHHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEE
Confidence 4456799999999999999999999865 567999999764322 23345577899999999999999999999999999
Q ss_pred EEEEEecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCccccc
Q 003963 579 CIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHE 658 (783)
Q Consensus 579 ~lV~E~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~~ 658 (783)
|+|||||++|+|.+++... .+++..+..++.||+.||+|||+++ |+||||||+|||++.++.+||+|||++.....
T Consensus 119 ~lv~Ey~~gg~L~~~l~~~--~l~~~~~~~~~~qi~~aL~~LH~~~--ivHrDLkp~NILl~~~~~~kL~DfG~~~~~~~ 194 (370)
T cd05596 119 YMVMEYMPGGDLVNLMSNY--DIPEKWARFYTAEVVLALDAIHSMG--FIHRDVKPDNMLLDKSGHLKLADFGTCMKMDA 194 (370)
T ss_pred EEEEcCCCCCcHHHHHHhc--CCCHHHHHHHHHHHHHHHHHHHHCC--eeccCCCHHHEEEcCCCCEEEEeccceeeccC
Confidence 9999999999999998753 4788889999999999999999998 99999999999999999999999999876543
Q ss_pred cc-ccccCCCCCCcccCcccccCC----CCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhcccccccCCC--CC
Q 003963 659 TY-LTTKTGKGTPQWMAPEVLRNE----PSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLEIPK--DV 731 (783)
Q Consensus 659 ~~-~~~~~~~Gt~~Y~aPE~~~~~----~~s~~sDIwSLG~il~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~--~~ 731 (783)
.. ......+||+.|+|||++.+. .++.++|||||||++|+|++|.+||...+....+..+........+|. .+
T Consensus 195 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~ 274 (370)
T cd05596 195 NGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMDHKNSLTFPDDIEI 274 (370)
T ss_pred CCcccCCCCCCCcCeECHHHhccCCCCCCCCCceeeeehhHHHHHHHhCCCCcCCCCHHHHHHHHHcCCCcCCCCCcCCC
Confidence 22 122355799999999998754 368899999999999999999999998887766666643333344444 57
Q ss_pred CHHHHHHHHHhhhhCCCC--CCCHHHHHHHHHHHHHHHhhc
Q 003963 732 DPRWAAIVESCWHSDPQC--RPSFQELVDKLRDLQRQYFQA 770 (783)
Q Consensus 732 s~~l~~LI~~cL~~dP~~--RPsa~ell~~L~~L~~~~f~~ 770 (783)
+.++.+||.+||..+|.+ |+++.++ +.|+||+.
T Consensus 275 s~~~~~li~~~L~~~p~r~~R~s~~el------l~h~~~~~ 309 (370)
T cd05596 275 SKQAKDLICAFLTDREVRLGRNGVDEI------KSHPFFKN 309 (370)
T ss_pred CHHHHHHHHHHccChhhccCCCCHHHH------hcCcccCC
Confidence 999999999999999987 9999999 67888864
No 70
>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k
Probab=100.00 E-value=5.8e-39 Score=346.61 Aligned_cols=256 Identities=30% Similarity=0.506 Sum_probs=210.8
Q ss_pred cccceeEeeeeccCCcEEEEEEEEeC-----------------CceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCce
Q 003963 503 LWEDLTIGEQIGQGSCGTVYHAVWYG-----------------SQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNV 565 (783)
Q Consensus 503 ~~~~y~i~~~LG~G~fG~Vy~a~~~~-----------------~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnI 565 (783)
..++|++.++||+|+||.||+|.+.. +..||+|++.... .......+.+|+.++..++||||
T Consensus 3 ~~~~~~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~E~~~l~~l~h~ni 81 (304)
T cd05096 3 PRGHLLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDA-NKNARNDFLKEVKILSRLKDPNI 81 (304)
T ss_pred chhhCeeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCC-CHHHHHHHHHHHHHHhhcCCCCe
Confidence 34689999999999999999998532 2359999987543 34456678999999999999999
Q ss_pred eeEeceeecCCceEEEEEecCCCCHHHHHhhcC------------------CcchHHHHHHHHHHHHHHHHHHHhCCCCE
Q 003963 566 LLFMGAVTSPQRLCIVTEFLPRGSLFRLLQRNT------------------TKLDWRRRILMALDIARGVSYLHHCNPPI 627 (783)
Q Consensus 566 v~l~~~~~~~~~~~lV~E~~~ggsL~~~L~~~~------------------~~l~~~~~~~i~~qi~~aL~~LH~~~~~I 627 (783)
+++++++...+..++||||+++++|.+++.... ..+++..++.++.||+.||.|||+++ |
T Consensus 82 v~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~--i 159 (304)
T cd05096 82 IRLLGVCVDEDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLSSLN--F 159 (304)
T ss_pred eEEEEEEecCCceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHCC--c
Confidence 999999999999999999999999999986421 23677889999999999999999998 9
Q ss_pred EecCCCCCCEEEcCCCcEEEEecCCCccccccc--ccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHc--CC
Q 003963 628 IHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETY--LTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELAT--EK 703 (783)
Q Consensus 628 vHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~--~~~~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~ellt--G~ 703 (783)
+||||||+|||++.++.+||+|||++....... .......++..|+|||++.+..++.++|||||||++|+|++ +.
T Consensus 160 vH~dlkp~Nill~~~~~~kl~DfG~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~ 239 (304)
T cd05096 160 VHRDLATRNCLVGENLTIKIADFGMSRNLYAGDYYRIQGRAVLPIRWMAWECILMGKFTTASDVWAFGVTLWEILMLCKE 239 (304)
T ss_pred cccCcchhheEEcCCccEEECCCccceecccCceeEecCcCCCCccccCHHHHhcCCCCchhhhHHHHHHHHHHHHccCC
Confidence 999999999999999999999999987543321 11223345789999999998889999999999999999986 67
Q ss_pred CCCCCCChHHHHHHhhcc------cccccCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHH
Q 003963 704 IPWDNLNSMQVIGAVGFM------NQRLEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLR 761 (783)
Q Consensus 704 ~Pf~~~~~~~~~~~i~~~------~~~~~~~~~~s~~l~~LI~~cL~~dP~~RPsa~ell~~L~ 761 (783)
.||...+..+....+... ......+..++..+.+||.+||..||.+|||+.+|.+.|+
T Consensus 240 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~RPs~~~i~~~l~ 303 (304)
T cd05096 240 QPYGELTDEQVIENAGEFFRDQGRQVYLFRPPPCPQGLYELMLQCWSRDCRERPSFSDIHAFLT 303 (304)
T ss_pred CCCCcCCHHHHHHHHHHHhhhccccccccCCCCCCHHHHHHHHHHccCCchhCcCHHHHHHHHh
Confidence 899887766655443211 1122345678899999999999999999999999987765
No 71
>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase. Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor
Probab=100.00 E-value=5.6e-40 Score=359.00 Aligned_cols=257 Identities=23% Similarity=0.396 Sum_probs=218.6
Q ss_pred cceeEeeeeccCCcEEEEEEEEeC-CceEEEEEEecccC-CHHHHHHHHHHHHHHHhCCCCceeeEeceeecCCceEEEE
Q 003963 505 EDLTIGEQIGQGSCGTVYHAVWYG-SQDVAVKVFSRQEY-SDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIVT 582 (783)
Q Consensus 505 ~~y~i~~~LG~G~fG~Vy~a~~~~-~~~vAiK~i~~~~~-~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lV~ 582 (783)
++|.+.+.||+|+||.||++.+.. ++.||||++..... .......+.+|+.+++.++||||+++++++...+.+|+||
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (330)
T cd05601 1 KDFDVKSLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILSISNSPWIPQLQYAFQDKDNLYLVM 80 (330)
T ss_pred CCceEEEEEEeccCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceeeEEecCCeEEEEE
Confidence 479999999999999999999764 56799999986543 2345567889999999999999999999999999999999
Q ss_pred EecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCccccccc-c
Q 003963 583 EFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETY-L 661 (783)
Q Consensus 583 E~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~-~ 661 (783)
||+++++|.+++.+....+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||++....... .
T Consensus 81 e~~~~~~L~~~l~~~~~~l~~~~~~~~~~qi~~aL~~lH~~~--i~H~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~~~~ 158 (330)
T cd05601 81 EYQPGGDLLSLLNRYEDQFDEDMAQFYLAELVLAIHSVHQMG--YVHRDIKPENVLIDRTGHIKLADFGSAARLTANKMV 158 (330)
T ss_pred CCCCCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC--eEcccCchHheEECCCCCEEeccCCCCeECCCCCce
Confidence 999999999999876667999999999999999999999998 9999999999999999999999999997654322 1
Q ss_pred cccCCCCCCcccCccccc------CCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhcccccccCC--CCCCH
Q 003963 662 TTKTGKGTPQWMAPEVLR------NEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLEIP--KDVDP 733 (783)
Q Consensus 662 ~~~~~~Gt~~Y~aPE~~~------~~~~s~~sDIwSLG~il~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~~--~~~s~ 733 (783)
......||+.|+|||++. +..++.++|||||||++|+|++|..||...+....+..+........+| ..+++
T Consensus 159 ~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 238 (330)
T cd05601 159 NSKLPVGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEMIYGRSPFHEGTSAKTYNNIMNFQRFLKFPEDPKVSS 238 (330)
T ss_pred eeecccCCccccCHHHhccccccccCCCCCcceeecccceeeeeccCCCCCCCCCHHHHHHHHHcCCCccCCCCCCCCCH
Confidence 223457899999999987 4557889999999999999999999998887766665554333333333 35789
Q ss_pred HHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhc
Q 003963 734 RWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQA 770 (783)
Q Consensus 734 ~l~~LI~~cL~~dP~~RPsa~ell~~L~~L~~~~f~~ 770 (783)
.+.+||.+||. +|.+||++.++ +.|+||+.
T Consensus 239 ~~~~li~~ll~-~p~~R~t~~~l------~~h~~~~~ 268 (330)
T cd05601 239 DFLDLIQSLLC-GQKERLGYEGL------CCHPFFSK 268 (330)
T ss_pred HHHHHHHHHcc-ChhhCCCHHHH------hCCCCcCC
Confidence 99999999997 99999999999 67888865
No 72
>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=4.7e-40 Score=374.88 Aligned_cols=265 Identities=32% Similarity=0.589 Sum_probs=230.7
Q ss_pred cccccccccceeEeeeeccCCcEEEEEEEEeC------CceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEec
Q 003963 497 CLDYEILWEDLTIGEQIGQGSCGTVYHAVWYG------SQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMG 570 (783)
Q Consensus 497 ~~~~e~~~~~y~i~~~LG~G~fG~Vy~a~~~~------~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~ 570 (783)
....++...+.+..+.||+|+||+||+|...+ ..-||||.++... +....+.|++|++++..|+|||||+|+|
T Consensus 478 ~~~~~i~r~~i~~~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a-~~~~~~dF~REaeLla~l~H~nIVrLlG 556 (774)
T KOG1026|consen 478 LKVLEIPRSDIVFKEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKA-ENQARQDFRREAELLAELQHPNIVRLLG 556 (774)
T ss_pred cceeEechhheeehhhhcCchhhhhhhhhccCCCCCccceehhHhhhcccc-cHHHHHHHHHHHHHHHhccCCCeEEEEE
Confidence 34456777889999999999999999998643 2349999987655 4456789999999999999999999999
Q ss_pred eeecCCceEEEEEecCCCCHHHHHhhc-------------CCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCE
Q 003963 571 AVTSPQRLCIVTEFLPRGSLFRLLQRN-------------TTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNL 637 (783)
Q Consensus 571 ~~~~~~~~~lV~E~~~ggsL~~~L~~~-------------~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NI 637 (783)
+|..++.+|||+|||..|+|.++|..+ +.+++..+.+.|+.||+.||.||-++. +|||||-.+|+
T Consensus 557 VC~~~~P~~MvFEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs~~~--FVHRDLATRNC 634 (774)
T KOG1026|consen 557 VCREGDPLCMVFEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLSSHH--FVHRDLATRNC 634 (774)
T ss_pred EEccCCeeEEEEEecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCc--ccccchhhhhc
Confidence 999999999999999999999999642 123888999999999999999999988 99999999999
Q ss_pred EEcCCCcEEEEecCCCcccc-ccccccc-CCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCChHHH
Q 003963 638 LVDKHWTVKVGDFGLSRLKH-ETYLTTK-TGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELAT-EKIPWDNLNSMQV 714 (783)
Q Consensus 638 Ll~~~~~vkL~DFGla~~~~-~~~~~~~-~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~ellt-G~~Pf~~~~~~~~ 714 (783)
||+++..|||+|||+++..- ..|.... ...-..+|||||.+....++.++||||+||+|||+++ |+.||.++...++
T Consensus 635 LVge~l~VKIsDfGLsRdiYssDYYk~~~~t~lPIRWMppEsIly~kFTteSDVWs~GVvLWEIFsyG~QPy~glSn~EV 714 (774)
T KOG1026|consen 635 LVGENLVVKISDFGLSRDIYSSDYYKVRGNTLLPIRWMPPESILYGKFTTESDVWSFGVVLWEIFSYGKQPYYGLSNQEV 714 (774)
T ss_pred eeccceEEEecccccchhhhhhhhhcccCCceeeeecCCHHHhhcCcccchhhhhhhhhhhhhhhccccCcccccchHHH
Confidence 99999999999999998432 2222211 2234679999999999999999999999999999999 9999999999999
Q ss_pred HHHhhcccccccCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHH
Q 003963 715 IGAVGFMNQRLEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQR 765 (783)
Q Consensus 715 ~~~i~~~~~~~~~~~~~s~~l~~LI~~cL~~dP~~RPsa~ell~~L~~L~~ 765 (783)
++.+....- +.-|.++|.++++|+..||+.+|.+||++.||-..|.++-.
T Consensus 715 Ie~i~~g~l-L~~Pe~CP~~vY~LM~~CW~~~P~~RPsF~eI~~~L~~~~~ 764 (774)
T KOG1026|consen 715 IECIRAGQL-LSCPENCPTEVYSLMLECWNENPKRRPSFKEIHSRLQAWAQ 764 (774)
T ss_pred HHHHHcCCc-ccCCCCCCHHHHHHHHHHhhcCcccCCCHHHHHHHHHHHHh
Confidence 998875544 88899999999999999999999999999999998877644
No 73
>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to
Probab=100.00 E-value=1.2e-39 Score=355.17 Aligned_cols=249 Identities=25% Similarity=0.409 Sum_probs=212.9
Q ss_pred eeeccCCcEEEEEEEEeC-CceEEEEEEecccC-CHHHHHHHHHHHHHHHhC-CCCceeeEeceeecCCceEEEEEecCC
Q 003963 511 EQIGQGSCGTVYHAVWYG-SQDVAVKVFSRQEY-SDEVIHSFRQEVSLMKRL-RHPNVLLFMGAVTSPQRLCIVTEFLPR 587 (783)
Q Consensus 511 ~~LG~G~fG~Vy~a~~~~-~~~vAiK~i~~~~~-~~~~~~~~~~Ei~il~~l-~HpnIv~l~~~~~~~~~~~lV~E~~~g 587 (783)
+.||+|+||.||+|.+.. ++.||||++..... .......+..|..++..+ +||||+++++++...+.+|+||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~ 80 (321)
T cd05591 1 KVLGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTALHCCFQTKDRLFFVMEYVNG 80 (321)
T ss_pred CccccCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCeEEEEEeCCCC
Confidence 469999999999999865 46799999976532 234455677889998866 799999999999999999999999999
Q ss_pred CCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCcccccccccccCCC
Q 003963 588 GSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETYLTTKTGK 667 (783)
Q Consensus 588 gsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~~ 667 (783)
++|..++... ..+++..+..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||++..............
T Consensus 81 ~~L~~~l~~~-~~~~~~~~~~~~~qi~~aL~~LH~~~--ivHrDikp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~ 157 (321)
T cd05591 81 GDLMFQIQRS-RKFDEPRSRFYAAEVTLALMFLHRHG--VIYRDLKLDNILLDAEGHCKLADFGMCKEGILNGVTTTTFC 157 (321)
T ss_pred CcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCC--eeccCCCHHHeEECCCCCEEEeecccceecccCCccccccc
Confidence 9999988764 45889999999999999999999998 99999999999999999999999999875433333334557
Q ss_pred CCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhcccccccCCCCCCHHHHHHHHHhhhhCC
Q 003963 668 GTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAAIVESCWHSDP 747 (783)
Q Consensus 668 Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~l~~LI~~cL~~dP 747 (783)
||+.|+|||++.+..++.++|||||||++|+|++|+.||...+....+..+. .....+|..+++++.+||.+||.+||
T Consensus 158 gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~Pf~~~~~~~~~~~i~--~~~~~~p~~~~~~~~~ll~~~L~~dp 235 (321)
T cd05591 158 GTPDYIAPEILQELEYGPSVDWWALGVLMYEMMAGQPPFEADNEDDLFESIL--HDDVLYPVWLSKEAVSILKAFMTKNP 235 (321)
T ss_pred cCccccCHHHHcCCCCCCccceechhHHHHHHhcCCCCCCCCCHHHHHHHHH--cCCCCCCCCCCHHHHHHHHHHhccCH
Confidence 8999999999999999999999999999999999999999888877766653 33455677789999999999999999
Q ss_pred CCCC-------CHHHHHHHHHHHHHHHhhc
Q 003963 748 QCRP-------SFQELVDKLRDLQRQYFQA 770 (783)
Q Consensus 748 ~~RP-------sa~ell~~L~~L~~~~f~~ 770 (783)
.+|| ++.++ +.|+||+.
T Consensus 236 ~~R~~~~~~~~~~~~~------~~hp~~~~ 259 (321)
T cd05591 236 NKRLGCVASQGGEDAI------KQHPFFKE 259 (321)
T ss_pred HHcCCCCCCCCCHHHH------hcCCccCC
Confidence 9999 78888 56777744
No 74
>PTZ00036 glycogen synthase kinase; Provisional
Probab=100.00 E-value=7.7e-39 Score=363.85 Aligned_cols=255 Identities=24% Similarity=0.349 Sum_probs=204.6
Q ss_pred cccceeEeeeeccCCcEEEEEEEEeC-CceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEeceeecC------
Q 003963 503 LWEDLTIGEQIGQGSCGTVYHAVWYG-SQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSP------ 575 (783)
Q Consensus 503 ~~~~y~i~~~LG~G~fG~Vy~a~~~~-~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~------ 575 (783)
..++|+++++||+|+||.||+|.+.. ++.||||++.... ....+|+.+|+.++|||||++++++...
T Consensus 64 ~~~~y~~~~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~------~~~~~Ei~il~~l~h~niv~l~~~~~~~~~~~~~ 137 (440)
T PTZ00036 64 PNKSYKLGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQDP------QYKNRELLIMKNLNHINIIFLKDYYYTECFKKNE 137 (440)
T ss_pred cCCeEEEeEEEEeCCCEEEEEEEECCCCCEEEEEEEecCc------chHHHHHHHHHhcCCCCCcceeeeEeecccccCC
Confidence 34689999999999999999999854 5689999886533 1234699999999999999998876432
Q ss_pred --CceEEEEEecCCCCHHHHHhh---cCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCC-cEEEEe
Q 003963 576 --QRLCIVTEFLPRGSLFRLLQR---NTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHW-TVKVGD 649 (783)
Q Consensus 576 --~~~~lV~E~~~ggsL~~~L~~---~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~-~vkL~D 649 (783)
..+++||||+++ +|.+++.. ....+++..++.++.||+.||+|||+++ |+||||||+||||+.++ .+||+|
T Consensus 138 ~~~~l~lvmE~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL~yLH~~~--IiHrDLKp~NILl~~~~~~vkL~D 214 (440)
T PTZ00036 138 KNIFLNVVMEFIPQ-TVHKYMKHYARNNHALPLFLVKLYSYQLCRALAYIHSKF--ICHRDLKPQNLLIDPNTHTLKLCD 214 (440)
T ss_pred CceEEEEEEecCCc-cHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCC--EecCCcCHHHEEEcCCCCceeeec
Confidence 246799999965 78777642 3456899999999999999999999998 99999999999998664 799999
Q ss_pred cCCCcccccccccccCCCCCCcccCcccccCC-CCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhcccc-----
Q 003963 650 FGLSRLKHETYLTTKTGKGTPQWMAPEVLRNE-PSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQ----- 723 (783)
Q Consensus 650 FGla~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~-~~s~~sDIwSLG~il~elltG~~Pf~~~~~~~~~~~i~~~~~----- 723 (783)
||+++...... ......||+.|+|||++.+. .++.++|||||||+||+|++|.+||.+.+..+.+..+.....
T Consensus 215 FGla~~~~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~~~p~~~ 293 (440)
T PTZ00036 215 FGSAKNLLAGQ-RSVSYICSRFYRAPELMLGATNYTTHIDLWSLGCIIAEMILGYPIFSGQSSVDQLVRIIQVLGTPTED 293 (440)
T ss_pred cccchhccCCC-CcccCCCCcCccCHHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHH
Confidence 99998654332 22345789999999998764 689999999999999999999999988766544433221100
Q ss_pred ----------------------cccCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhcCcC
Q 003963 724 ----------------------RLEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQASRS 773 (783)
Q Consensus 724 ----------------------~~~~~~~~s~~l~~LI~~cL~~dP~~RPsa~ell~~L~~L~~~~f~~~~~ 773 (783)
...+|...++++.+||.+||..||.+|||+.++ |+|+||+..+.
T Consensus 294 ~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~li~~~L~~dP~~R~ta~e~------l~hp~f~~~~~ 359 (440)
T PTZ00036 294 QLKEMNPNYADIKFPDVKPKDLKKVFPKGTPDDAINFISQFLKYEPLKRLNPIEA------LADPFFDDLRD 359 (440)
T ss_pred HHHHhchhhhcccCCccCchhHHHHhccCCCHHHHHHHHHHCCCChhHCcCHHHH------hCChhHHhhhc
Confidence 011344578899999999999999999999999 78899977654
No 75
>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla
Probab=100.00 E-value=2e-39 Score=347.19 Aligned_cols=254 Identities=26% Similarity=0.367 Sum_probs=205.0
Q ss_pred cceeEeeeeccCCcEEEEEEEEe--CCceEEEEEEecccCCHHHHHHHHHHHHHHHhC---CCCceeeEeceee-----c
Q 003963 505 EDLTIGEQIGQGSCGTVYHAVWY--GSQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRL---RHPNVLLFMGAVT-----S 574 (783)
Q Consensus 505 ~~y~i~~~LG~G~fG~Vy~a~~~--~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l---~HpnIv~l~~~~~-----~ 574 (783)
++|++.+.||+|+||.||+|.+. +++.||+|++............+.+|+.+++.+ +||||+++++++. .
T Consensus 1 ~~Y~~~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~~~~~ 80 (290)
T cd07862 1 QQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDR 80 (290)
T ss_pred CCcceeeEeccCCCeEEEEEEEcCCCCeEEEEEEEecccCCCCchHHHHHHHHHHHhhcccCCCCcceEEEEEecccCCC
Confidence 47999999999999999999874 346799999876544333334556677777766 6999999999875 3
Q ss_pred CCceEEEEEecCCCCHHHHHhhc-CCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCC
Q 003963 575 PQRLCIVTEFLPRGSLFRLLQRN-TTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLS 653 (783)
Q Consensus 575 ~~~~~lV~E~~~ggsL~~~L~~~-~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla 653 (783)
...+++||||++ ++|.+++... ...+++..++.++.||+.||.|||+++ |+||||||+|||++.++.+||+|||++
T Consensus 81 ~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~--iiH~dlkp~Nil~~~~~~~kl~Dfg~~ 157 (290)
T cd07862 81 ETKLTLVFEHVD-QDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHR--VVHRDLKPQNILVTSSGQIKLADFGLA 157 (290)
T ss_pred CCcEEEEEccCC-CCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC--eeeCCCCHHHEEEcCCCCEEEccccce
Confidence 456899999996 5999998653 345889999999999999999999998 999999999999999999999999998
Q ss_pred cccccccccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccccc---------
Q 003963 654 RLKHETYLTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQR--------- 724 (783)
Q Consensus 654 ~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~elltG~~Pf~~~~~~~~~~~i~~~~~~--------- 724 (783)
...... .......|++.|+|||++.+..++.++|||||||++|+|++|.+||...+..+.+..+......
T Consensus 158 ~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~~~~~~~~i~~~~~~~~~~~~~~~ 236 (290)
T cd07862 158 RIYSFQ-MALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRD 236 (290)
T ss_pred EeccCC-cccccccccccccChHHHhCCCCCCccchHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCCCChhhchhh
Confidence 765433 2233456899999999999988999999999999999999999999887766554443211100
Q ss_pred ----------------ccCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHh
Q 003963 725 ----------------LEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYF 768 (783)
Q Consensus 725 ----------------~~~~~~~s~~l~~LI~~cL~~dP~~RPsa~ell~~L~~L~~~~f 768 (783)
..+...+++.+.+||.+||+.||++|||+.++ |+|+||
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~------l~hp~f 290 (290)
T cd07862 237 VALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSA------LSHPYF 290 (290)
T ss_pred hcccchhccCCCCCCHHHHccCCCHHHHHHHHHHhccCchhcCCHHHH------hcCCCC
Confidence 01123467889999999999999999999999 567776
No 76
>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.
Probab=100.00 E-value=8.5e-40 Score=364.30 Aligned_cols=257 Identities=21% Similarity=0.298 Sum_probs=213.7
Q ss_pred cceeEeeeeccCCcEEEEEEEEeC-CceEEEEEEecccCC-HHHHHHHHHHHHHHHhCCCCceeeEeceeecCCceEEEE
Q 003963 505 EDLTIGEQIGQGSCGTVYHAVWYG-SQDVAVKVFSRQEYS-DEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIVT 582 (783)
Q Consensus 505 ~~y~i~~~LG~G~fG~Vy~a~~~~-~~~vAiK~i~~~~~~-~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lV~ 582 (783)
.+|+++++||+|+||.||+|.+.. ++.||||++...... ......+.+|+.+|+.++||||+++++.+..++.+|+||
T Consensus 1 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~ 80 (376)
T cd05598 1 SMFVKIKTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVM 80 (376)
T ss_pred CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhCCCCCcceEEEEEEcCCEEEEEE
Confidence 379999999999999999999765 567999998754322 234566889999999999999999999999999999999
Q ss_pred EecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCcccccc---
Q 003963 583 EFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHET--- 659 (783)
Q Consensus 583 E~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~~~--- 659 (783)
|||++|+|.+++... ..+++..+..++.||+.||+|||+++ |+||||||+|||++.++.+||+|||++......
T Consensus 81 E~~~~g~L~~~i~~~-~~~~~~~~~~~~~qi~~al~~lH~~~--ivHrDlkp~Nill~~~~~ikL~DFG~a~~~~~~~~~ 157 (376)
T cd05598 81 DYIPGGDMMSLLIRL-GIFEEDLARFYIAELTCAIESVHKMG--FIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDS 157 (376)
T ss_pred eCCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCC--eEeCCCCHHHEEECCCCCEEEEeCCCCccccccccc
Confidence 999999999999764 45888999999999999999999998 999999999999999999999999997422100
Q ss_pred ----------------------------------------cccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHH
Q 003963 660 ----------------------------------------YLTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWEL 699 (783)
Q Consensus 660 ----------------------------------------~~~~~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~el 699 (783)
.......+||+.|||||++.+..++.++|||||||++|+|
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyel 237 (376)
T cd05598 158 KYYQKGDHHRQDSMEPSEEWSEIDRCRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEM 237 (376)
T ss_pred cccccccccccccccccccccccccccccchhhhhhhhcccccccccCCCccccCHHHHcCCCCCcceeeeeccceeeeh
Confidence 0001134699999999999999999999999999999999
Q ss_pred HcCCCCCCCCChHHHHHHhhcccccccCC--CCCCHHHHHHHHHhhhhCCCCCC---CHHHHHHHHHHHHHHHhhcC
Q 003963 700 ATEKIPWDNLNSMQVIGAVGFMNQRLEIP--KDVDPRWAAIVESCWHSDPQCRP---SFQELVDKLRDLQRQYFQAS 771 (783)
Q Consensus 700 ltG~~Pf~~~~~~~~~~~i~~~~~~~~~~--~~~s~~l~~LI~~cL~~dP~~RP---sa~ell~~L~~L~~~~f~~~ 771 (783)
++|+.||...+.......+........++ ..+++++.+||.+|+ .+|.+|+ ++.++ +.|+||+..
T Consensus 238 l~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~l~-~~p~~R~~~~t~~el------l~h~~~~~~ 307 (376)
T cd05598 238 LVGQPPFLADTPAETQLKVINWETTLHIPSQAKLSREASDLILRLC-CGAEDRLGKNGADEI------KAHPFFKGI 307 (376)
T ss_pred hhCCCCCCCCCHHHHHHHHhccCccccCCCCCCCCHHHHHHHHHHh-cCHhhcCCCCCHHHH------hCCCCcCCC
Confidence 99999999887766555543332233333 368899999999976 5999999 89999 678888653
No 77
>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit. Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce
Probab=100.00 E-value=4e-39 Score=358.98 Aligned_cols=260 Identities=28% Similarity=0.480 Sum_probs=213.2
Q ss_pred ccccccceeEeeeeccCCcEEEEEEEEe------CCceEEEEEEecccCCHHHHHHHHHHHHHHHhC-CCCceeeEecee
Q 003963 500 YEILWEDLTIGEQIGQGSCGTVYHAVWY------GSQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRL-RHPNVLLFMGAV 572 (783)
Q Consensus 500 ~e~~~~~y~i~~~LG~G~fG~Vy~a~~~------~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l-~HpnIv~l~~~~ 572 (783)
+++..++|++.++||+|+||.||+|.+. ....||||++...... .....+.+|+.++..+ +|||||++++++
T Consensus 30 ~~~~~~~~~~~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~~~-~~~~~~~~Ei~il~~l~~HpnIv~l~~~~ 108 (375)
T cd05104 30 WEFPRNRLSFGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAHL-TEREALMSELKVLSYLGNHINIVNLLGAC 108 (375)
T ss_pred cccchHHeehhheecCCccceEEEEEEeccccCccceeEEEEeccCCcCc-HHHHHHHHHHHHHHHhcCCcceeeeeeee
Confidence 3455678999999999999999999753 2346999998654332 3346788999999999 899999999999
Q ss_pred ecCCceEEEEEecCCCCHHHHHhhcC------------------------------------------------------
Q 003963 573 TSPQRLCIVTEFLPRGSLFRLLQRNT------------------------------------------------------ 598 (783)
Q Consensus 573 ~~~~~~~lV~E~~~ggsL~~~L~~~~------------------------------------------------------ 598 (783)
...+..++|||||++|+|.+++....
T Consensus 109 ~~~~~~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 188 (375)
T cd05104 109 TVGGPTLVITEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSLNEYMDMKPGVSYVVPTKADKRRS 188 (375)
T ss_pred ccCCcceeeehhccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccchhhhhhhhcCCCcccccccccccccc
Confidence 99999999999999999999986432
Q ss_pred --------------------CcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCccccc
Q 003963 599 --------------------TKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHE 658 (783)
Q Consensus 599 --------------------~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~~ 658 (783)
..+++..++.++.||+.||+|||+++ |+||||||+|||++.++.+||+|||++.....
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~--ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~ 266 (375)
T cd05104 189 VRSGSYIDQDVTSEILEEDELALDTEDLLSFSYQVAKGMSFLASKN--CIHRDLAARNILLTHGRITKICDFGLARDIRN 266 (375)
T ss_pred cccceecccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCC--eeccCCchhhEEEECCCcEEEecCccceeccC
Confidence 14678888999999999999999998 99999999999999999999999999876543
Q ss_pred ccc--cccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCChHHHHHHhhcccccccCCCCCCHHH
Q 003963 659 TYL--TTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELAT-EKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRW 735 (783)
Q Consensus 659 ~~~--~~~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~l 735 (783)
... ......++..|+|||++.+..++.++|||||||++|+|++ |..||.....................+...+.++
T Consensus 267 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDi~slG~~l~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 346 (375)
T cd05104 267 DSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSSPYPGMPVDSKFYKMIKEGYRMLSPECAPSEM 346 (375)
T ss_pred cccccccCCCCCCcceeChhHhcCCCCCCCCCHHHHHHHHHHHHhcCCCCCCCCCchHHHHHHHHhCccCCCCCCCCHHH
Confidence 221 1112334678999999999999999999999999999998 8999987654433333322223444566778999
Q ss_pred HHHHHHhhhhCCCCCCCHHHHHHHHHH
Q 003963 736 AAIVESCWHSDPQCRPSFQELVDKLRD 762 (783)
Q Consensus 736 ~~LI~~cL~~dP~~RPsa~ell~~L~~ 762 (783)
.+||.+||..||++||++.++++.|++
T Consensus 347 ~~li~~cl~~dP~~RPs~~eil~~l~~ 373 (375)
T cd05104 347 YDIMKSCWDADPLKRPTFKQIVQLIEQ 373 (375)
T ss_pred HHHHHHHccCChhHCcCHHHHHHHHHh
Confidence 999999999999999999999999875
No 78
>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]
Probab=100.00 E-value=8.3e-42 Score=344.70 Aligned_cols=255 Identities=26% Similarity=0.455 Sum_probs=225.5
Q ss_pred cceeEeeeeccCCcEEEEEEEEeCC-ceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEeceeecCCceEEEEE
Q 003963 505 EDLTIGEQIGQGSCGTVYHAVWYGS-QDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIVTE 583 (783)
Q Consensus 505 ~~y~i~~~LG~G~fG~Vy~a~~~~~-~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lV~E 583 (783)
+-|.++.+||+|+||.||++.++.+ +.+|||.+..+. -++++..|+.|+++++.|+||++||.|.....++||||
T Consensus 33 EVFDi~~KLGEGSYGSV~KAIH~EsG~v~AIK~VPV~s----DLQEIIKEISIMQQC~S~yVVKYYGSYFK~sDLWIVME 108 (502)
T KOG0574|consen 33 EVFDIVGKLGEGSYGSVHKAIHRESGHVLAIKKVPVDT----DLQEIIKEISIMQQCKSKYVVKYYGSYFKHSDLWIVME 108 (502)
T ss_pred HHHHHHHHhcCCcchHHHHHHHhccCcEEEEEecCccc----hHHHHHHHHHHHHHcCCchhhhhhhhhccCCceEeehh
Confidence 4577889999999999999998764 668999876543 35678889999999999999999999999999999999
Q ss_pred ecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCcccccccccc
Q 003963 584 FLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETYLTT 663 (783)
Q Consensus 584 ~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~~~~ 663 (783)
||..|++.++++..+.+++++.+..+++..++||+|||... =||||||..|||++.+|..||+|||.+-...+.....
T Consensus 109 YCGAGSiSDI~R~R~K~L~E~EIs~iL~~TLKGL~YLH~~~--KIHRDIKAGNILLNT~G~AKLADFGVAGQLTDTMAKR 186 (502)
T KOG0574|consen 109 YCGAGSISDIMRARRKPLSEQEISAVLRDTLKGLQYLHDLK--KIHRDIKAGNILLNTDGIAKLADFGVAGQLTDTMAKR 186 (502)
T ss_pred hcCCCcHHHHHHHhcCCccHHHHHHHHHHHHhHHHHHHHHH--HHHhhcccccEEEcccchhhhhhccccchhhhhHHhh
Confidence 99999999999988889999999999999999999999987 7999999999999999999999999998887777777
Q ss_pred cCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhcc-cccccCCCCCCHHHHHHHHHh
Q 003963 664 KTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFM-NQRLEIPKDVDPRWAAIVESC 742 (783)
Q Consensus 664 ~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~elltG~~Pf~~~~~~~~~~~i~~~-~~~~~~~~~~s~~l~~LI~~c 742 (783)
.+..|||.|||||++..-.|+.++||||||++..||..|++||.+..+...+..+... ...+.-|..++.++.+||++|
T Consensus 187 NTVIGTPFWMAPEVI~EIGY~~~ADIWSLGITaIEMAEG~PPYsDIHPMRAIFMIPT~PPPTF~KPE~WS~~F~DFi~~C 266 (502)
T KOG0574|consen 187 NTVIGTPFWMAPEVIEEIGYDTKADIWSLGITAIEMAEGRPPYSDIHPMRAIFMIPTKPPPTFKKPEEWSSEFNDFIRSC 266 (502)
T ss_pred CccccCcccccHHHHHHhccchhhhHhhhcchhhhhhcCCCCcccccccceeEeccCCCCCCCCChHhhhhHHHHHHHHH
Confidence 7889999999999999999999999999999999999999999998887655444221 123445667899999999999
Q ss_pred hhhCCCCCCCHHHHHHHHHHHHHHHhhcC
Q 003963 743 WHSDPQCRPSFQELVDKLRDLQRQYFQAS 771 (783)
Q Consensus 743 L~~dP~~RPsa~ell~~L~~L~~~~f~~~ 771 (783)
|.++|++|.|+.++ ++|+|.++.
T Consensus 267 LiK~PE~R~TA~~L------~~H~FiknA 289 (502)
T KOG0574|consen 267 LIKKPEERKTALRL------CEHTFIKNA 289 (502)
T ss_pred hcCCHHHHHHHHHH------hhhhhhcCC
Confidence 99999999999999 678887653
No 79
>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an
Probab=100.00 E-value=1.7e-39 Score=362.71 Aligned_cols=256 Identities=22% Similarity=0.332 Sum_probs=213.2
Q ss_pred ceeEeeeeccCCcEEEEEEEEeC-CceEEEEEEecccC-CHHHHHHHHHHHHHHHhCCCCceeeEeceeecCCceEEEEE
Q 003963 506 DLTIGEQIGQGSCGTVYHAVWYG-SQDVAVKVFSRQEY-SDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIVTE 583 (783)
Q Consensus 506 ~y~i~~~LG~G~fG~Vy~a~~~~-~~~vAiK~i~~~~~-~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lV~E 583 (783)
+|+++++||+|+||.||+|.+.. ++.||||++..... .......+.+|+.+++.++|||||++++++...+.+|+|||
T Consensus 2 ~f~~~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~~h~~iv~~~~~~~~~~~~~lv~E 81 (382)
T cd05625 2 MFVKIKTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVMD 81 (382)
T ss_pred CcEEEEEEEeCCCEEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhCCCCcCCeEEEEEEeCCEEEEEEe
Confidence 68999999999999999999865 46799999876543 23456678899999999999999999999999999999999
Q ss_pred ecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCccccccc---
Q 003963 584 FLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETY--- 660 (783)
Q Consensus 584 ~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~--- 660 (783)
||++|+|.+++.+. ..+++..+..++.||+.||+|||+++ |+||||||+||||+.++.+||+|||++.......
T Consensus 82 ~~~gg~L~~~l~~~-~~~~e~~~~~~~~qi~~al~~lH~~~--ivHrDlKp~NILl~~~g~~kL~DFGla~~~~~~~~~~ 158 (382)
T cd05625 82 YIPGGDMMSLLIRM-GIFPEDLARFYIAELTCAVESVHKMG--FIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDSK 158 (382)
T ss_pred CCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCC--eecCCCCHHHEEECCCCCEEEeECCCCcccccccccc
Confidence 99999999999764 45889999999999999999999998 9999999999999999999999999975321000
Q ss_pred --------------------------------------------ccccCCCCCCcccCcccccCCCCCchhHHHHHHHHH
Q 003963 661 --------------------------------------------LTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVIL 696 (783)
Q Consensus 661 --------------------------------------------~~~~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il 696 (783)
......+||+.|+|||++.+..++.++|||||||+|
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlGvil 238 (382)
T cd05625 159 YYQSGDHVRQDSMDFSNEWGDPANCRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVIL 238 (382)
T ss_pred ccccccccccccccccccccccccccccccccchhhhhccccccccccccccCcccCCHHHhcCCCCCCeeeEEechHHH
Confidence 001234689999999999999999999999999999
Q ss_pred HHHHcCCCCCCCCChHHHHHHhhcccccccCC--CCCCHHHHHHHHHhhhhCCCCCCC---HHHHHHHHHHHHHHHhhcC
Q 003963 697 WELATEKIPWDNLNSMQVIGAVGFMNQRLEIP--KDVDPRWAAIVESCWHSDPQCRPS---FQELVDKLRDLQRQYFQAS 771 (783)
Q Consensus 697 ~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~~--~~~s~~l~~LI~~cL~~dP~~RPs---a~ell~~L~~L~~~~f~~~ 771 (783)
|||++|++||...+.......+........+| ..+++++.++|.+|+ .+|.+|++ +.++ +.|+||+..
T Consensus 239 ~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~~li~~l~-~~p~~R~~~~~~~ei------~~hp~f~~~ 311 (382)
T cd05625 239 YEMLVGQPPFLAQTPLETQMKVINWQTSLHIPPQAKLSPEASDLIIKLC-RGPEDRLGKNGADEI------KAHPFFKTI 311 (382)
T ss_pred HHHHhCCCCCCCCCHHHHHHHHHccCCCcCCCCcccCCHHHHHHHHHHc-cCHhHcCCCCCHHHH------hcCCCcCCc
Confidence 99999999999887766555543333333333 468999999999976 59999987 8888 578888653
No 80
>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn. Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa
Probab=100.00 E-value=8.2e-39 Score=336.90 Aligned_cols=258 Identities=31% Similarity=0.561 Sum_probs=220.0
Q ss_pred ccccccceeEeeeeccCCcEEEEEEEEeCCceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEeceeecCCceE
Q 003963 500 YEILWEDLTIGEQIGQGSCGTVYHAVWYGSQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLC 579 (783)
Q Consensus 500 ~e~~~~~y~i~~~LG~G~fG~Vy~a~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~ 579 (783)
|++..++|++.++||+|+||.||+|.+..+..||+|.+..... ..+.+.+|+.+++.++|+||+++++++...+..+
T Consensus 1 ~~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~v~iK~~~~~~~---~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 77 (261)
T cd05072 1 WEIPRESIKLVKKLGAGQFGEVWMGYYNNSTKVAVKTLKPGTM---SVQAFLEEANLMKTLQHDKLVRLYAVVTKEEPIY 77 (261)
T ss_pred CcCchHHeEEeeecCCcCCceEEEEEecCCceEEEEEccCCch---hHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCcE
Confidence 4566789999999999999999999987778899998765432 2467889999999999999999999999999999
Q ss_pred EEEEecCCCCHHHHHhhc-CCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCccccc
Q 003963 580 IVTEFLPRGSLFRLLQRN-TTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHE 658 (783)
Q Consensus 580 lV~E~~~ggsL~~~L~~~-~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~~ 658 (783)
++|||+++++|.+++... ...+++..++.++.|++.||+|||+.+ ++|+||||+||+++.++.++|+|||++.....
T Consensus 78 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~LH~~~--i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~ 155 (261)
T cd05072 78 IITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKN--YIHRDLRAANVLVSESLMCKIADFGLARVIED 155 (261)
T ss_pred EEEecCCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC--eeccccchhhEEecCCCcEEECCCccceecCC
Confidence 999999999999998653 356888899999999999999999988 99999999999999999999999999976544
Q ss_pred cccc-ccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCChHHHHHHhhcccccccCCCCCCHHHH
Q 003963 659 TYLT-TKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELAT-EKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWA 736 (783)
Q Consensus 659 ~~~~-~~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~l~ 736 (783)
.... .....++..|+|||.+.+..++.++|||||||++|+|++ |..||...........+... ...+.+..++.++.
T Consensus 156 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 234 (261)
T cd05072 156 NEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLYEIVTYGKIPYPGMSNSDVMSALQRG-YRMPRMENCPDELY 234 (261)
T ss_pred CceeccCCCccceecCCHHHhccCCCChhhhhhhhHHHHHHHHccCCCCCCCCCHHHHHHHHHcC-CCCCCCCCCCHHHH
Confidence 3221 122345678999999998889999999999999999998 99999887776666555322 23444567889999
Q ss_pred HHHHHhhhhCCCCCCCHHHHHHHHHHH
Q 003963 737 AIVESCWHSDPQCRPSFQELVDKLRDL 763 (783)
Q Consensus 737 ~LI~~cL~~dP~~RPsa~ell~~L~~L 763 (783)
++|.+||..+|++||+++++++.|+++
T Consensus 235 ~li~~~l~~~p~~Rp~~~~i~~~l~~~ 261 (261)
T cd05072 235 DIMKTCWKEKAEERPTFDYLQSVLDDF 261 (261)
T ss_pred HHHHHHccCCcccCcCHHHHHHHHhcC
Confidence 999999999999999999999998763
No 81
>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found
Probab=100.00 E-value=2.2e-39 Score=360.45 Aligned_cols=260 Identities=24% Similarity=0.388 Sum_probs=217.8
Q ss_pred ccccceeEeeeeccCCcEEEEEEEEeC-CceEEEEEEecccC-CHHHHHHHHHHHHHHHhCCCCceeeEeceeecCCceE
Q 003963 502 ILWEDLTIGEQIGQGSCGTVYHAVWYG-SQDVAVKVFSRQEY-SDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLC 579 (783)
Q Consensus 502 ~~~~~y~i~~~LG~G~fG~Vy~a~~~~-~~~vAiK~i~~~~~-~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~ 579 (783)
...++|++.+.||+|+||.||++.+.. ++.||+|++.+... .......+.+|+.+++.++||||+++++++..+..+|
T Consensus 40 ~~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~~~~ 119 (370)
T cd05621 40 MKAEDYDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFCAFQDDKYLY 119 (370)
T ss_pred CCHHHCeEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEE
Confidence 345789999999999999999999865 46799999875432 2233456788999999999999999999999999999
Q ss_pred EEEEecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCcccccc
Q 003963 580 IVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHET 659 (783)
Q Consensus 580 lV~E~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~~~ 659 (783)
+|||||++|+|.+++... .+++..+..++.||+.||+|||+++ |+||||||+|||++.++.+||+|||++......
T Consensus 120 lv~Ey~~gg~L~~~l~~~--~~~~~~~~~~~~qil~aL~~LH~~~--IvHrDLKp~NILl~~~~~~kL~DFG~a~~~~~~ 195 (370)
T cd05621 120 MVMEYMPGGDLVNLMSNY--DVPEKWAKFYTAEVVLALDAIHSMG--LIHRDVKPDNMLLDKHGHLKLADFGTCMKMDET 195 (370)
T ss_pred EEEcCCCCCcHHHHHHhc--CCCHHHHHHHHHHHHHHHHHHHHCC--eEecCCCHHHEEECCCCCEEEEecccceecccC
Confidence 999999999999999754 4888999999999999999999998 999999999999999999999999999765432
Q ss_pred c-ccccCCCCCCcccCcccccCCC----CCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhcccccccCCC--CCC
Q 003963 660 Y-LTTKTGKGTPQWMAPEVLRNEP----SDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLEIPK--DVD 732 (783)
Q Consensus 660 ~-~~~~~~~Gt~~Y~aPE~~~~~~----~s~~sDIwSLG~il~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~--~~s 732 (783)
. ......+||+.|+|||++.+.. ++.++|||||||+||+|++|..||...+....+..+........+|. .++
T Consensus 196 ~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~~DiwSlG~ilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s 275 (370)
T cd05621 196 GMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADSLVGTYSKIMDHKNSLNFPEDVEIS 275 (370)
T ss_pred CceecccCCCCcccCCHHHHhccCCCCCCCcccCEEeehHHHHHHHhCCCCCCCCCHHHHHHHHHhCCcccCCCCcccCC
Confidence 2 1233567999999999987643 67899999999999999999999998887766666644333444444 568
Q ss_pred HHHHHHHHHhhhhCCCC--CCCHHHHHHHHHHHHHHHhhcC
Q 003963 733 PRWAAIVESCWHSDPQC--RPSFQELVDKLRDLQRQYFQAS 771 (783)
Q Consensus 733 ~~l~~LI~~cL~~dP~~--RPsa~ell~~L~~L~~~~f~~~ 771 (783)
..++++|..||..++.+ |+++.++ ++|+||+..
T Consensus 276 ~~~~~li~~~L~~~~~r~~R~~~~e~------l~hp~~~~~ 310 (370)
T cd05621 276 KHAKNLICAFLTDREVRLGRNGVEEI------KQHPFFKND 310 (370)
T ss_pred HHHHHHHHHHccCchhccCCCCHHHH------hcCcccCCC
Confidence 99999999999855543 8899999 678999764
No 82
>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp
Probab=100.00 E-value=2.2e-39 Score=352.53 Aligned_cols=249 Identities=27% Similarity=0.447 Sum_probs=208.9
Q ss_pred eeeccCCcEEEEEEEEeC-CceEEEEEEecccCC-HHHHHHHHHHHHHHHhC-CCCceeeEeceeecCCceEEEEEecCC
Q 003963 511 EQIGQGSCGTVYHAVWYG-SQDVAVKVFSRQEYS-DEVIHSFRQEVSLMKRL-RHPNVLLFMGAVTSPQRLCIVTEFLPR 587 (783)
Q Consensus 511 ~~LG~G~fG~Vy~a~~~~-~~~vAiK~i~~~~~~-~~~~~~~~~Ei~il~~l-~HpnIv~l~~~~~~~~~~~lV~E~~~g 587 (783)
++||+|+||.||+|.+.. ++.||||++...... ......+..|..++..+ +||||+++++++.....+|+||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~~~~~~~~lv~e~~~g 80 (316)
T cd05592 1 KVLGKGSFGKVMLAELKGTNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFLTHLFCTFQTKEHLFFVMEYLNG 80 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 469999999999999865 467999999765322 23344556677777654 799999999999999999999999999
Q ss_pred CCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCcccccccccccCCC
Q 003963 588 GSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETYLTTKTGK 667 (783)
Q Consensus 588 gsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~~ 667 (783)
|+|..++... ..+++..+..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||++.............+
T Consensus 81 g~L~~~~~~~-~~~~~~~~~~~~~qi~~al~~LH~~~--ivH~dlkp~Nill~~~~~~kL~Dfg~a~~~~~~~~~~~~~~ 157 (316)
T cd05592 81 GDLMFHIQSS-GRFDEARARFYAAEIICGLQFLHKKG--IIYRDLKLDNVLLDKDGHIKIADFGMCKENMNGEGKASTFC 157 (316)
T ss_pred CcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCC--EEeCCCCHHHeEECCCCCEEEccCcCCeECCCCCCcccccc
Confidence 9999998764 46899999999999999999999998 99999999999999999999999999975443333334567
Q ss_pred CCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhcccccccCCCCCCHHHHHHHHHhhhhCC
Q 003963 668 GTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAAIVESCWHSDP 747 (783)
Q Consensus 668 Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~l~~LI~~cL~~dP 747 (783)
||+.|+|||++.+..++.++|||||||++|+|++|..||...+..+....+. .....++..++.++.+||.+||..||
T Consensus 158 gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~G~~Pf~~~~~~~~~~~i~--~~~~~~~~~~~~~~~~ll~~~l~~~P 235 (316)
T cd05592 158 GTPDYIAPEILKGQKYNESVDWWSFGVLLYEMLIGQSPFHGEDEDELFDSIL--NDRPHFPRWISKEAKDCLSKLFERDP 235 (316)
T ss_pred CCccccCHHHHcCCCCCCcccchhHHHHHHHHHhCCCCCCCCCHHHHHHHHH--cCCCCCCCCCCHHHHHHHHHHccCCH
Confidence 9999999999999999999999999999999999999999888777666553 34556778899999999999999999
Q ss_pred CCCCCHH-HHHHHHHHHHHHHhhc
Q 003963 748 QCRPSFQ-ELVDKLRDLQRQYFQA 770 (783)
Q Consensus 748 ~~RPsa~-ell~~L~~L~~~~f~~ 770 (783)
.+||++. ++ +.|+||+.
T Consensus 236 ~~R~~~~~~l------~~h~~~~~ 253 (316)
T cd05592 236 TKRLGVDGDI------RQHPFFRG 253 (316)
T ss_pred HHcCCChHHH------HcCcccCC
Confidence 9999875 45 34666643
No 83
>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=100.00 E-value=4e-39 Score=355.10 Aligned_cols=262 Identities=27% Similarity=0.429 Sum_probs=230.3
Q ss_pred ccccceeEeeeeccCCcEEEEEEEEeC-CceEEEEEEecccCCH-HHHHHHHHHHHHHHhCC-CCceeeEeceeecCCce
Q 003963 502 ILWEDLTIGEQIGQGSCGTVYHAVWYG-SQDVAVKVFSRQEYSD-EVIHSFRQEVSLMKRLR-HPNVLLFMGAVTSPQRL 578 (783)
Q Consensus 502 ~~~~~y~i~~~LG~G~fG~Vy~a~~~~-~~~vAiK~i~~~~~~~-~~~~~~~~Ei~il~~l~-HpnIv~l~~~~~~~~~~ 578 (783)
.....|++.+.||.|.||.||++..+. ++.+|+|++.+..... .....+.+|+.+|+++. |||||.++++|+....+
T Consensus 32 ~~~~~Y~l~~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpniv~l~~~~e~~~~~ 111 (382)
T KOG0032|consen 32 DIKEKYELGRELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRGKEDREDVRREVAILQQLSGHPNIVQLKDAFEDPDSV 111 (382)
T ss_pred cccccEEehhhhCCCCceEEEEEEecCCCceeEEEEeehhhccccccHHHHHHHHHHHHhccCCCCEEEEEEEEEcCCeE
Confidence 345689999999999999999999877 6789999998776543 24567889999999998 99999999999999999
Q ss_pred EEEEEecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcC----CCcEEEEecCCCc
Q 003963 579 CIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDK----HWTVKVGDFGLSR 654 (783)
Q Consensus 579 ~lV~E~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~----~~~vkL~DFGla~ 654 (783)
++|||+|.||.|++.+... .+++..+..++.|++.++.|||+.| |+||||||+|+|+.. ++.+|++|||++.
T Consensus 112 ~lvmEL~~GGeLfd~i~~~--~~sE~da~~~~~~il~av~~lH~~g--vvHrDlKpEN~L~~~~~~~~~~ik~~DFGla~ 187 (382)
T KOG0032|consen 112 YLVMELCEGGELFDRIVKK--HYSERDAAGIIRQILEAVKYLHSLG--VVHRDLKPENLLLASKDEGSGRIKLIDFGLAK 187 (382)
T ss_pred EEEEEecCCchHHHHHHHc--cCCHHHHHHHHHHHHHHHHHHHhCC--ceeccCCHHHeeeccccCCCCcEEEeeCCCce
Confidence 9999999999999999776 3999999999999999999999999 999999999999953 3589999999999
Q ss_pred ccccccccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhcccc--cccCCCCCC
Q 003963 655 LKHETYLTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQ--RLEIPKDVD 732 (783)
Q Consensus 655 ~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~elltG~~Pf~~~~~~~~~~~i~~~~~--~~~~~~~~s 732 (783)
.... .......+||+.|+|||++....++..+||||+|+++|.|++|.+||...+.......+..... ..+....++
T Consensus 188 ~~~~-~~~~~~~~Gtp~y~APEvl~~~~y~~~~DiWS~Gvi~yiLL~G~~PF~~~~~~~~~~~i~~~~~~f~~~~w~~is 266 (382)
T KOG0032|consen 188 FIKP-GERLHTIVGTPEYVAPEVLGGRPYGDEVDVWSIGVILYILLSGVPPFWGETEFEIFLAILRGDFDFTSEPWDDIS 266 (382)
T ss_pred EccC-CceEeeecCCccccCchhhcCCCCCcccchhHHHHHHHHHhhCCCCCcCCChhHHHHHHHcCCCCCCCCCccccC
Confidence 8777 4455678999999999999999999999999999999999999999999988877777655444 233446689
Q ss_pred HHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhcCcCC
Q 003963 733 PRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQASRST 774 (783)
Q Consensus 733 ~~l~~LI~~cL~~dP~~RPsa~ell~~L~~L~~~~f~~~~~~ 774 (783)
..+++||+.||..||..|+++.++ |+|+|.+.....
T Consensus 267 ~~akd~i~~ll~~dp~~R~ta~~~------L~HpWi~~~~~~ 302 (382)
T KOG0032|consen 267 ESAKDFIRKLLEFDPRKRLTAAQA------LQHPWIKSIGEA 302 (382)
T ss_pred HHHHHHHHHhcccCcccCCCHHHH------hcCccccCCccc
Confidence 999999999999999999999999 568998765433
No 84
>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]
Probab=100.00 E-value=3.6e-40 Score=344.44 Aligned_cols=254 Identities=24% Similarity=0.373 Sum_probs=210.1
Q ss_pred cceeEeeeeccCCcEEEEEEEEeCC-ceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEeceeecC--C---ce
Q 003963 505 EDLTIGEQIGQGSCGTVYHAVWYGS-QDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSP--Q---RL 578 (783)
Q Consensus 505 ~~y~i~~~LG~G~fG~Vy~a~~~~~-~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~--~---~~ 578 (783)
-.|...+++|.|+||.||.|..... ++||||++-.+..-. .+|+++|+.++|||||++..+|... . ++
T Consensus 24 i~~~~~~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d~r~k------nrEl~im~~l~HpNIV~L~~~f~~~~~~d~~~l 97 (364)
T KOG0658|consen 24 ISYEAVRLIGSGSFGVVYQAKLRETEEEVAIKKVLQDKRYK------NRELQIMRKLDHPNIVRLLYFFSSSTESDEVYL 97 (364)
T ss_pred EEEEeeEEEeecccceEEEEEEcCCCceeEEEEecCCCCcC------cHHHHHHHhcCCcCeeeEEEEEEecCCCchhHH
Confidence 3678889999999999999998665 789999986654322 3699999999999999999887532 2 46
Q ss_pred EEEEEecCCCCHHHHHhh---cCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCC-CcEEEEecCCCc
Q 003963 579 CIVTEFLPRGSLFRLLQR---NTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKH-WTVKVGDFGLSR 654 (783)
Q Consensus 579 ~lV~E~~~ggsL~~~L~~---~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~-~~vkL~DFGla~ 654 (783)
.+|||||+. +|++.++. .+..++.-.++.+..||++||+|||+.| |+||||||.|+|||.+ |.+||||||.|+
T Consensus 98 nlVleymP~-tL~~~~r~~~~~~~~mp~~~iKLYt~Qlfrgl~yLh~~~--IcHRDIKPqNlLvD~~tg~LKicDFGSAK 174 (364)
T KOG0658|consen 98 NLVLEYMPE-TLYRVIRHYTRANQRMPLLEIKLYTYQLFRGLAYLHSHG--ICHRDIKPQNLLVDPDTGVLKICDFGSAK 174 (364)
T ss_pred HHHHHhchH-HHHHHHHHHhhcCCCCceeeeHHHHHHHHHHHHHHHhcC--cccCCCChheEEEcCCCCeEEeccCCcce
Confidence 789999965 99999874 3567888899999999999999999988 9999999999999976 999999999999
Q ss_pred ccccccccccCCCCCCcccCcccccCC-CCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhcccccc--------
Q 003963 655 LKHETYLTTKTGKGTPQWMAPEVLRNE-PSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRL-------- 725 (783)
Q Consensus 655 ~~~~~~~~~~~~~Gt~~Y~aPE~~~~~-~~s~~sDIwSLG~il~elltG~~Pf~~~~~~~~~~~i~~~~~~~-------- 725 (783)
........ .+...|..|+|||.+.|. .|+.+.||||.||++.||+-|++-|.+.+....+..+..+.+.+
T Consensus 175 ~L~~~epn-iSYicSRyYRaPELifga~~Yt~~IDiWSaGCV~aELl~g~plFpG~s~~dQL~eIik~lG~Pt~e~I~~m 253 (364)
T KOG0658|consen 175 VLVKGEPN-ISYICSRYYRAPELIFGATEYTTSIDIWSAGCVMAELLKGQPLFPGDSSVDQLVEIIKVLGTPTREDIKSM 253 (364)
T ss_pred eeccCCCc-eeEEEeccccCHHHHcCccccCceeEEhhhhHHHHHHhcCCcccCCCCHHHHHHHHHHHhCCCCHHHHhhc
Confidence 77655433 455679999999998875 58999999999999999999999999988776665443221111
Q ss_pred -------------------cCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhcCcCC
Q 003963 726 -------------------EIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQASRST 774 (783)
Q Consensus 726 -------------------~~~~~~s~~l~~LI~~cL~~dP~~RPsa~ell~~L~~L~~~~f~~~~~~ 774 (783)
-+....++++.+|+.++|+.+|.+|.++.++ |.|+||+.-|..
T Consensus 254 n~~y~~~~~p~ik~~~~~~~~~~~~~~d~~dll~~~L~Y~P~~R~~~~~~------l~h~fFdelr~~ 315 (364)
T KOG0658|consen 254 NPNYTEFKFPQIKAHPWHKVFFKRLPPDALDLLSKLLQYSPSKRLSALEA------LAHPFFDELRDP 315 (364)
T ss_pred CcccccccCcccccccceeecccCCCHHHHHHHHHHhccChhhcCCHHHH------hcchhhHHhhCc
Confidence 0234578999999999999999999999999 789999766554
No 85
>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=100.00 E-value=2.4e-39 Score=354.26 Aligned_cols=255 Identities=22% Similarity=0.365 Sum_probs=211.1
Q ss_pred ceeEeeeeccCCcEEEEEEEEe----CCceEEEEEEecccCC--HHHHHHHHHHHHHHHhCC-CCceeeEeceeecCCce
Q 003963 506 DLTIGEQIGQGSCGTVYHAVWY----GSQDVAVKVFSRQEYS--DEVIHSFRQEVSLMKRLR-HPNVLLFMGAVTSPQRL 578 (783)
Q Consensus 506 ~y~i~~~LG~G~fG~Vy~a~~~----~~~~vAiK~i~~~~~~--~~~~~~~~~Ei~il~~l~-HpnIv~l~~~~~~~~~~ 578 (783)
+|++.++||+|+||.||++... .++.||+|++.+.... ......+..|+.+++.++ ||||+++++++..++.+
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~ 80 (332)
T cd05614 1 NFELLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFLVTLHYAFQTEAKL 80 (332)
T ss_pred CceEEEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCCcccEEEEEecCCEE
Confidence 5899999999999999999864 3467999999764322 234456788999999995 99999999999999999
Q ss_pred EEEEEecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCccccc
Q 003963 579 CIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHE 658 (783)
Q Consensus 579 ~lV~E~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~~ 658 (783)
++||||+++|+|.+++... ..+++..+..++.||+.||.|||+++ |+||||||+||||+.++.+||+|||+++....
T Consensus 81 ~lv~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~--ivHrDlkp~Nili~~~~~~kl~DfG~~~~~~~ 157 (332)
T cd05614 81 HLILDYVSGGEMFTHLYQR-DNFSEDEVRFYSGEIILALEHLHKLG--IVYRDIKLENILLDSEGHVVLTDFGLSKEFLS 157 (332)
T ss_pred EEEEeCCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCC--cEecCCCHHHeEECCCCCEEEeeCcCCccccc
Confidence 9999999999999998753 45899999999999999999999998 99999999999999999999999999875433
Q ss_pred cc-ccccCCCCCCcccCcccccCCC-CCchhHHHHHHHHHHHHHcCCCCCCCCCh----HHHHHHhhcccccccCCCCCC
Q 003963 659 TY-LTTKTGKGTPQWMAPEVLRNEP-SDEKSDVYSFGVILWELATEKIPWDNLNS----MQVIGAVGFMNQRLEIPKDVD 732 (783)
Q Consensus 659 ~~-~~~~~~~Gt~~Y~aPE~~~~~~-~s~~sDIwSLG~il~elltG~~Pf~~~~~----~~~~~~i~~~~~~~~~~~~~s 732 (783)
.. ......+||+.|+|||++.+.. ++.++|||||||++|+|++|..||..... ......+ ......++..++
T Consensus 158 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~--~~~~~~~~~~~~ 235 (332)
T cd05614 158 EEKERTYSFCGTIEYMAPEIIRGKGGHGKAVDWWSLGILIFELLTGASPFTLEGERNTQSEVSRRI--LKCDPPFPSFIG 235 (332)
T ss_pred cCCCccccccCCccccCHHHhcCCCCCCCccccccchhhhhhhhcCCCCCCCCCCCCCHHHHHHHH--hcCCCCCCCCCC
Confidence 21 2223457899999999998754 78899999999999999999999964322 2222222 234456777899
Q ss_pred HHHHHHHHHhhhhCCCCCC-----CHHHHHHHHHHHHHHHhhcC
Q 003963 733 PRWAAIVESCWHSDPQCRP-----SFQELVDKLRDLQRQYFQAS 771 (783)
Q Consensus 733 ~~l~~LI~~cL~~dP~~RP-----sa~ell~~L~~L~~~~f~~~ 771 (783)
+.+.+||.+||..||.+|| ++.++ +.|+||+..
T Consensus 236 ~~~~~li~~~l~~dp~~R~~~~~~~~~~~------l~h~~~~~~ 273 (332)
T cd05614 236 PEAQDLLHKLLRKDPKKRLGAGPQGASEI------KEHPFFKGL 273 (332)
T ss_pred HHHHHHHHHHcCCCHHHcCCCCCCCHHHH------HcCCCcCCC
Confidence 9999999999999999999 77888 677888653
No 86
>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr
Probab=100.00 E-value=1.4e-39 Score=355.01 Aligned_cols=253 Identities=28% Similarity=0.427 Sum_probs=209.5
Q ss_pred eeeccCCcEEEEEEEEeC-CceEEEEEEecccCC-HHHHHHHHHHHH-HHHhCCCCceeeEeceeecCCceEEEEEecCC
Q 003963 511 EQIGQGSCGTVYHAVWYG-SQDVAVKVFSRQEYS-DEVIHSFRQEVS-LMKRLRHPNVLLFMGAVTSPQRLCIVTEFLPR 587 (783)
Q Consensus 511 ~~LG~G~fG~Vy~a~~~~-~~~vAiK~i~~~~~~-~~~~~~~~~Ei~-il~~l~HpnIv~l~~~~~~~~~~~lV~E~~~g 587 (783)
+.||+|+||.||+|.+.. ++.||||++...... ......+..|.. +++.++||||+++++++...+.+|+||||+++
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~ 80 (323)
T cd05575 1 KVIGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTADKLYFVLDYVNG 80 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhhCCCCCCCCeeEEEEeCCEEEEEEcCCCC
Confidence 469999999999999864 577999999765332 222334444544 56789999999999999999999999999999
Q ss_pred CCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCcccccccccccCCC
Q 003963 588 GSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETYLTTKTGK 667 (783)
Q Consensus 588 gsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~~ 667 (783)
++|..++... ..+++..+..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||++.............+
T Consensus 81 g~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~lH~~g--ivH~dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~~ 157 (323)
T cd05575 81 GELFFHLQRE-RSFPEPRARFYAAEIASALGYLHSLN--IIYRDLKPENILLDSQGHVVLTDFGLCKEGIEHSKTTSTFC 157 (323)
T ss_pred CCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCC--eEeCCCCHHHeEECCCCcEEEeccCCCcccccCCCcccccc
Confidence 9999999764 46889999999999999999999998 99999999999999999999999999875433333334557
Q ss_pred CCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhcccccccCCCCCCHHHHHHHHHhhhhCC
Q 003963 668 GTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAAIVESCWHSDP 747 (783)
Q Consensus 668 Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~l~~LI~~cL~~dP 747 (783)
||+.|+|||++.+..++.++|||||||++|+|++|..||...+..+....+. .....++..+++.+.+||.+||+.||
T Consensus 158 gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~i~--~~~~~~~~~~~~~~~~li~~~l~~~p 235 (323)
T cd05575 158 GTPEYLAPEVLRKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRDTAEMYDNIL--NKPLRLKPNISVSARHLLEGLLQKDR 235 (323)
T ss_pred CChhhcChhhhcCCCCCccccccccchhhhhhhcCCCCCCCCCHHHHHHHHH--cCCCCCCCCCCHHHHHHHHHHhhcCH
Confidence 8999999999999999999999999999999999999999887776665553 33455667789999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHhhc
Q 003963 748 QCRPSFQELVDKLRDLQRQYFQA 770 (783)
Q Consensus 748 ~~RPsa~ell~~L~~L~~~~f~~ 770 (783)
.+||++.+.+..+ +.|+||..
T Consensus 236 ~~R~~~~~~~~~i--l~~~~~~~ 256 (323)
T cd05575 236 TKRLGAKDDFLEI--KNHVFFSS 256 (323)
T ss_pred HhCCCCCCCHHHH--HcCCCcCC
Confidence 9999985333222 56788754
No 87
>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer
Probab=100.00 E-value=7.9e-39 Score=341.12 Aligned_cols=256 Identities=34% Similarity=0.603 Sum_probs=218.1
Q ss_pred cccceeEeeeeccCCcEEEEEEEEeCC------ceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEeceeecCC
Q 003963 503 LWEDLTIGEQIGQGSCGTVYHAVWYGS------QDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQ 576 (783)
Q Consensus 503 ~~~~y~i~~~LG~G~fG~Vy~a~~~~~------~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~ 576 (783)
..++|++.+.||+|+||.||+|.+... ..|++|.+.... .......+.+|+.++..++||||+++++++....
T Consensus 3 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~-~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~ 81 (283)
T cd05048 3 PLSAVRFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENA-EPKVQQEFRQEAELMSDLQHPNIVCLLGVCTKEQ 81 (283)
T ss_pred ChHHcchhhcccCccCCcEEEEEEecCCCCcceeeEEEEecccCC-CHHHHHHHHHHHHHHHhcCCcccceEEEEEcCCC
Confidence 456899999999999999999987543 358999886443 3455677899999999999999999999999989
Q ss_pred ceEEEEEecCCCCHHHHHhhcC---------------CcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcC
Q 003963 577 RLCIVTEFLPRGSLFRLLQRNT---------------TKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDK 641 (783)
Q Consensus 577 ~~~lV~E~~~ggsL~~~L~~~~---------------~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~ 641 (783)
..|++|||+++++|.+++.... ..+++..++.++.||+.||.|||+++ |+|+||||+||++++
T Consensus 82 ~~~~~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH~~~--i~H~dlkp~Nil~~~ 159 (283)
T cd05048 82 PTCMLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLSSHH--FVHRDLAARNCLVGE 159 (283)
T ss_pred ceEEEEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhCC--eeccccccceEEEcC
Confidence 9999999999999999997532 35788899999999999999999998 999999999999999
Q ss_pred CCcEEEEecCCCccccccc--ccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCChHHHHHHh
Q 003963 642 HWTVKVGDFGLSRLKHETY--LTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELAT-EKIPWDNLNSMQVIGAV 718 (783)
Q Consensus 642 ~~~vkL~DFGla~~~~~~~--~~~~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~ellt-G~~Pf~~~~~~~~~~~i 718 (783)
++.++|+|||++....... .......+++.|+|||.+.+..++.++|||||||++|||++ |..||......+....+
T Consensus 160 ~~~~~L~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~il~el~~~g~~p~~~~~~~~~~~~i 239 (283)
T cd05048 160 GLTVKISDFGLSRDIYSADYYRVQSKSLLPVRWMPPEAILYGKFTTESDIWSFGVVLWEIFSYGLQPYYGFSNQEVIEMI 239 (283)
T ss_pred CCcEEECCCcceeeccccccccccCCCcccccccCHHHhccCcCchhhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH
Confidence 9999999999987543221 12223456788999999998889999999999999999998 99999988877766555
Q ss_pred hcccccccCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHH
Q 003963 719 GFMNQRLEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRD 762 (783)
Q Consensus 719 ~~~~~~~~~~~~~s~~l~~LI~~cL~~dP~~RPsa~ell~~L~~ 762 (783)
. .......+..+++++.+|+.+||..||.+||++.+|++.|+.
T Consensus 240 ~-~~~~~~~~~~~~~~~~~l~~~c~~~~p~~Rp~~~~i~~~l~~ 282 (283)
T cd05048 240 R-SRQLLPCPEDCPARVYALMIECWNEIPARRPRFKDIHTRLRS 282 (283)
T ss_pred H-cCCcCCCcccCCHHHHHHHHHHccCChhhCcCHHHHHHHHhc
Confidence 3 223445677899999999999999999999999999999875
No 88
>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C. Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re
Probab=100.00 E-value=2.5e-39 Score=352.35 Aligned_cols=249 Identities=27% Similarity=0.451 Sum_probs=213.0
Q ss_pred eeeccCCcEEEEEEEEeC-CceEEEEEEecccC-CHHHHHHHHHHHHHHHhC-CCCceeeEeceeecCCceEEEEEecCC
Q 003963 511 EQIGQGSCGTVYHAVWYG-SQDVAVKVFSRQEY-SDEVIHSFRQEVSLMKRL-RHPNVLLFMGAVTSPQRLCIVTEFLPR 587 (783)
Q Consensus 511 ~~LG~G~fG~Vy~a~~~~-~~~vAiK~i~~~~~-~~~~~~~~~~Ei~il~~l-~HpnIv~l~~~~~~~~~~~lV~E~~~g 587 (783)
+.||+|+||.||+|.+.. ++.||||++.+... .......+.+|+.++..+ +||||+++++++...+.+|+||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (318)
T cd05570 1 KVLGKGSFGKVLLAELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFLTQLHSCFQTKDRLFFVMEYVNG 80 (318)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 469999999999999865 46799999986542 223455677899999888 699999999999999999999999999
Q ss_pred CCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCcccccccccccCCC
Q 003963 588 GSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETYLTTKTGK 667 (783)
Q Consensus 588 gsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~~ 667 (783)
++|..++... ..+++..+..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||++.............+
T Consensus 81 ~~L~~~~~~~-~~l~~~~~~~~~~qi~~~l~~LH~~~--ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~ 157 (318)
T cd05570 81 GDLMFHIQRS-GRFDEPRARFYAAEIVLGLQFLHERG--IIYRDLKLDNVLLDSEGHIKIADFGMCKEGILGGVTTSTFC 157 (318)
T ss_pred CCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHhCC--eEccCCCHHHeEECCCCcEEecccCCCeecCcCCCccccee
Confidence 9999988764 36899999999999999999999998 99999999999999999999999999865333333333457
Q ss_pred CCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhcccccccCCCCCCHHHHHHHHHhhhhCC
Q 003963 668 GTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAAIVESCWHSDP 747 (783)
Q Consensus 668 Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~l~~LI~~cL~~dP 747 (783)
|++.|+|||++.+..++.++|||||||++|+|++|..||...+.......+. .....++..++..+.+||.+||..||
T Consensus 158 g~~~y~aPE~~~~~~~~~~~DiwslGvil~~l~~G~~pf~~~~~~~~~~~i~--~~~~~~~~~~~~~~~~li~~~l~~dP 235 (318)
T cd05570 158 GTPDYIAPEILSYQPYGPAVDWWALGVLLYEMLAGQSPFEGDDEDELFQSIL--EDEVRYPRWLSKEAKSILKSFLTKNP 235 (318)
T ss_pred cCccccCHHHhcCCCCCcchhhhhHHHHHHHHhhCCCCCCCCCHHHHHHHHH--cCCCCCCCcCCHHHHHHHHHHccCCH
Confidence 8999999999999999999999999999999999999998887776665553 33455677899999999999999999
Q ss_pred CCCCCH-----HHHHHHHHHHHHHHhhc
Q 003963 748 QCRPSF-----QELVDKLRDLQRQYFQA 770 (783)
Q Consensus 748 ~~RPsa-----~ell~~L~~L~~~~f~~ 770 (783)
.+||++ .++ +.|+||+.
T Consensus 236 ~~R~s~~~~~~~~l------l~~~~~~~ 257 (318)
T cd05570 236 EKRLGCLPTGEQDI------KGHPFFRE 257 (318)
T ss_pred HHcCCCCCCCHHHH------hcCCCcCC
Confidence 999999 777 56778755
No 89
>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I
Probab=100.00 E-value=2.3e-39 Score=352.40 Aligned_cols=250 Identities=25% Similarity=0.402 Sum_probs=210.2
Q ss_pred eeeccCCcEEEEEEEEeC-CceEEEEEEecccCC-HHHHHHHHHHHHHHHhC-CCCceeeEeceeecCCceEEEEEecCC
Q 003963 511 EQIGQGSCGTVYHAVWYG-SQDVAVKVFSRQEYS-DEVIHSFRQEVSLMKRL-RHPNVLLFMGAVTSPQRLCIVTEFLPR 587 (783)
Q Consensus 511 ~~LG~G~fG~Vy~a~~~~-~~~vAiK~i~~~~~~-~~~~~~~~~Ei~il~~l-~HpnIv~l~~~~~~~~~~~lV~E~~~g 587 (783)
++||+|+||.||+|.+.. ++.||+|++...... ......+..|..++..+ +||||+++++++...+.+|+||||+.+
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~~~~ 80 (316)
T cd05620 1 KVLGKGSFGKVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTHLYCTFQTKEHLFFVMEFLNG 80 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCCccCeeEEEEeCCEEEEEECCCCC
Confidence 469999999999999865 467999999765321 22345566788888754 899999999999999999999999999
Q ss_pred CCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCcccccccccccCCC
Q 003963 588 GSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETYLTTKTGK 667 (783)
Q Consensus 588 gsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~~ 667 (783)
++|..++... ..+++..+..++.||+.||+|||+++ |+||||||+|||++.++.++|+|||++.............+
T Consensus 81 g~L~~~i~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~--ivHrDlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~ 157 (316)
T cd05620 81 GDLMFHIQDK-GRFDLYRATFYAAEIVCGLQFLHSKG--IIYRDLKLDNVMLDRDGHIKIADFGMCKENVFGDNRASTFC 157 (316)
T ss_pred CcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCC--eEecCCCHHHeEECCCCCEEeCccCCCeecccCCCceeccC
Confidence 9999998764 45889999999999999999999998 99999999999999999999999999864332222334567
Q ss_pred CCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhcccccccCCCCCCHHHHHHHHHhhhhCC
Q 003963 668 GTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAAIVESCWHSDP 747 (783)
Q Consensus 668 Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~l~~LI~~cL~~dP 747 (783)
||+.|+|||++.+..++.++|||||||++|+|++|..||...+..+....+. .....++..++.++.+||.+||..||
T Consensus 158 gt~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~Pf~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~li~~~l~~dP 235 (316)
T cd05620 158 GTPDYIAPEILQGLKYTFSVDWWSFGVLLYEMLIGQSPFHGDDEDELFESIR--VDTPHYPRWITKESKDILEKLFERDP 235 (316)
T ss_pred CCcCccCHHHHcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHH--hCCCCCCCCCCHHHHHHHHHHccCCH
Confidence 8999999999999999999999999999999999999998888776666553 23455677899999999999999999
Q ss_pred CCCCCHH-HHHHHHHHHHHHHhhcC
Q 003963 748 QCRPSFQ-ELVDKLRDLQRQYFQAS 771 (783)
Q Consensus 748 ~~RPsa~-ell~~L~~L~~~~f~~~ 771 (783)
.+||++. ++ +.|+||+..
T Consensus 236 ~~R~~~~~~~------~~h~~f~~~ 254 (316)
T cd05620 236 TRRLGVVGNI------RGHPFFKTI 254 (316)
T ss_pred HHcCCChHHH------HcCCCcCCC
Confidence 9999974 55 457888654
No 90
>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1. Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=1.5e-38 Score=348.62 Aligned_cols=260 Identities=22% Similarity=0.383 Sum_probs=214.3
Q ss_pred ccccceeEeeeeccCCcEEEEEEEEeC-CceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEeceeecCCceEE
Q 003963 502 ILWEDLTIGEQIGQGSCGTVYHAVWYG-SQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCI 580 (783)
Q Consensus 502 ~~~~~y~i~~~LG~G~fG~Vy~a~~~~-~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~l 580 (783)
+..++|++.++||.|+||.||++.+.. +..+|+|++.... .......+.+|+++++.++||||+++++++..++.+++
T Consensus 2 l~~~~y~~~~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 80 (333)
T cd06650 2 LKDDDFEKISELGAGNGGVVFKVSHKPSGLIMARKLIHLEI-KPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISI 80 (333)
T ss_pred cchhhhheeccccCCCCEEEEEEEECCCCcEEEEEEeeccc-CHHHHHHHHHHHHHHHHCCCCcccceeEEEEECCEEEE
Confidence 345789999999999999999999875 4568888876543 34456678999999999999999999999999999999
Q ss_pred EEEecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhC-CCCEEecCCCCCCEEEcCCCcEEEEecCCCcccccc
Q 003963 581 VTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHC-NPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHET 659 (783)
Q Consensus 581 V~E~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~-~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~~~ 659 (783)
||||+++++|.+++... ..+++..+..++.|++.||.|||+. + |+|+||||+|||++.++.+||+|||++......
T Consensus 81 v~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~l~~~l~~lH~~~~--ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~ 157 (333)
T cd06650 81 CMEHMDGGSLDQVLKKA-GRIPEQILGKVSIAVIKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS 157 (333)
T ss_pred EEecCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHhcCC--EEecCCChhhEEEcCCCCEEEeeCCcchhhhhh
Confidence 99999999999999764 3588999999999999999999974 5 999999999999999999999999998755432
Q ss_pred cccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhc-------------------
Q 003963 660 YLTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGF------------------- 720 (783)
Q Consensus 660 ~~~~~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~elltG~~Pf~~~~~~~~~~~i~~------------------- 720 (783)
......|+..|+|||++.+..++.++|||||||++|+|++|+.||...........+..
T Consensus 158 --~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (333)
T cd06650 158 --MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAIGRYPIPPPDAKELELMFGCPVEGDPAESETSPRPRPPG 235 (333)
T ss_pred --ccccCCCCccccCHHHhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcchhHHHHHhcCcccCCccccccCcccCCcc
Confidence 22345689999999999998899999999999999999999999976554333211100
Q ss_pred ------------------------ccccccCC-CCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhcCcC
Q 003963 721 ------------------------MNQRLEIP-KDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQASRS 773 (783)
Q Consensus 721 ------------------------~~~~~~~~-~~~s~~l~~LI~~cL~~dP~~RPsa~ell~~L~~L~~~~f~~~~~ 773 (783)
......++ ..++.++++||.+||+.||.+||++.++ ++|+||+....
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~P~~Rpt~~el------l~h~~~~~~~~ 307 (333)
T cd06650 236 RPLSSYGPDSRPPMAIFELLDYIVNEPPPKLPSGVFGAEFQDFVNKCLIKNPAERADLKQL------MVHAFIKRSEA 307 (333)
T ss_pred chhhhhcccccccccHHHHHHHHhcCCCccCCCCCcCHHHHHHHHHhccCCcccCcCHHHH------hhCHHHhcCcc
Confidence 00001111 1357889999999999999999999999 67899987654
No 91
>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=2.7e-39 Score=350.14 Aligned_cols=259 Identities=25% Similarity=0.384 Sum_probs=217.1
Q ss_pred ccccceeEeeeeccCCcEEEEEEEEeCCceEEEEEEecccCCHHHHHHHHHHHHHHHhCC-CCceeeEeceeecCCceEE
Q 003963 502 ILWEDLTIGEQIGQGSCGTVYHAVWYGSQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLR-HPNVLLFMGAVTSPQRLCI 580 (783)
Q Consensus 502 ~~~~~y~i~~~LG~G~fG~Vy~a~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~-HpnIv~l~~~~~~~~~~~l 580 (783)
+....|+++++||+||.+.||++...+.+.||+|.+.....+...+.-|.+|+.+|..|+ |.+||++|+|-..++++||
T Consensus 358 Vkg~~Yeilk~iG~GGSSkV~kV~~s~~~iyalkkv~~~~~D~qtl~gy~nEI~lL~KLkg~~~IIqL~DYEv~d~~lYm 437 (677)
T KOG0596|consen 358 VKGREYEILKQIGSGGSSKVFKVLNSDKQIYALKKVVLLEADNQTLDGYRNEIALLNKLKGHDKIIQLYDYEVTDGYLYM 437 (677)
T ss_pred ECcchhhHHHhhcCCCcceeeeeecCCCcchhhhHHHHhhcCHHHHHHHHHHHHHHHHhcCCceEEEEeeeeccCceEEE
Confidence 456789999999999999999999887888999998888888888999999999999996 9999999999999999999
Q ss_pred EEEecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCcccccc-
Q 003963 581 VTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHET- 659 (783)
Q Consensus 581 V~E~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~~~- 659 (783)
||||- ..+|..+|++.....+.-.+..++.||+.++.++|.+| |||.||||.|+|+-. |.+||+|||+|..+...
T Consensus 438 vmE~G-d~DL~kiL~k~~~~~~~~~lk~ywkqML~aV~~IH~~g--IVHSDLKPANFLlVk-G~LKLIDFGIA~aI~~DT 513 (677)
T KOG0596|consen 438 VMECG-DIDLNKILKKKKSIDPDWFLKFYWKQMLLAVKTIHQHG--IVHSDLKPANFLLVK-GRLKLIDFGIANAIQPDT 513 (677)
T ss_pred Eeecc-cccHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHhc--eeecCCCcccEEEEe-eeEEeeeechhcccCccc
Confidence 99998 45999999876655554478889999999999999999 999999999999965 49999999999866543
Q ss_pred -cccccCCCCCCcccCcccccCCC-----------CCchhHHHHHHHHHHHHHcCCCCCCCCC-hHHHHHHhhccccccc
Q 003963 660 -YLTTKTGKGTPQWMAPEVLRNEP-----------SDEKSDVYSFGVILWELATEKIPWDNLN-SMQVIGAVGFMNQRLE 726 (783)
Q Consensus 660 -~~~~~~~~Gt~~Y~aPE~~~~~~-----------~s~~sDIwSLG~il~elltG~~Pf~~~~-~~~~~~~i~~~~~~~~ 726 (783)
.....+.+||+.||+||.+.... .++++||||||||||+|+.|++||.... ....+..+...+..++
T Consensus 514 TsI~kdsQvGT~NYMsPEAl~~~~s~~~~~~~k~Ki~r~SDvWSLGCILYqMvYgktPf~~~~n~~aKl~aI~~P~~~Ie 593 (677)
T KOG0596|consen 514 TSIVKDSQVGTVNYMSPEALTDMSSSRENGKSKIKISRKSDVWSLGCILYQMVYGKTPFGQIINQIAKLHAITDPNHEIE 593 (677)
T ss_pred cceeeccccCcccccCHHHHhhccccccCCCcceeecCccchhhhhhHHHHHHhcCCchHHHHHHHHHHHhhcCCCcccc
Confidence 33445668999999999986433 3578999999999999999999997654 3333444433333445
Q ss_pred CCCCCCHH-HHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhc
Q 003963 727 IPKDVDPR-WAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQA 770 (783)
Q Consensus 727 ~~~~~s~~-l~~LI~~cL~~dP~~RPsa~ell~~L~~L~~~~f~~ 770 (783)
+|..-+.. +.++++.||.+||++||+..+| |+|+|.+-
T Consensus 594 fp~~~~~~~li~~mK~CL~rdPkkR~si~eL------LqhpFl~~ 632 (677)
T KOG0596|consen 594 FPDIPENDELIDVMKCCLARDPKKRWSIPEL------LQHPFLQI 632 (677)
T ss_pred ccCCCCchHHHHHHHHHHhcCcccCCCcHHH------hcCccccc
Confidence 55544443 9999999999999999999999 67888765
No 92
>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl
Probab=100.00 E-value=3e-39 Score=353.48 Aligned_cols=250 Identities=26% Similarity=0.443 Sum_probs=208.5
Q ss_pred eeeccCCcEEEEEEEEeC-CceEEEEEEecccCC-HHHHHHHHHHHHHHHhC-CCCceeeEeceeecCCceEEEEEecCC
Q 003963 511 EQIGQGSCGTVYHAVWYG-SQDVAVKVFSRQEYS-DEVIHSFRQEVSLMKRL-RHPNVLLFMGAVTSPQRLCIVTEFLPR 587 (783)
Q Consensus 511 ~~LG~G~fG~Vy~a~~~~-~~~vAiK~i~~~~~~-~~~~~~~~~Ei~il~~l-~HpnIv~l~~~~~~~~~~~lV~E~~~g 587 (783)
+.||+|+||.||++.+.. ++.||||++.+.... ......+..|+.+++.+ +||||+++++++.....+|+|||||++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~~~~~~~~lv~e~~~~ 80 (329)
T cd05588 1 RVIGRGSYAKVLLVELKKTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVGLHSCFQTESRLFFVIEFVSG 80 (329)
T ss_pred CeEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCCCCceEEEEEcCCEEEEEEeCCCC
Confidence 468999999999999865 467999999875433 23456678899999988 699999999999999999999999999
Q ss_pred CCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCcccccccccccCCC
Q 003963 588 GSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETYLTTKTGK 667 (783)
Q Consensus 588 gsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~~ 667 (783)
++|..++... ..+++..++.++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++............+
T Consensus 81 g~L~~~~~~~-~~l~~~~~~~~~~qi~~~l~~lH~~~--ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~~~~~~~~~ 157 (329)
T cd05588 81 GDLMFHMQRQ-RKLPEEHARFYSAEISLALNFLHERG--IIYRDLKLDNVLLDAEGHIKLTDYGMCKEGIRPGDTTSTFC 157 (329)
T ss_pred CCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCC--eEecCCCHHHeEECCCCCEEECcCccccccccCCCcccccc
Confidence 9999988654 46999999999999999999999998 99999999999999999999999999875333233334567
Q ss_pred CCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCCh--------HHHHHHhhcccccccCCCCCCHHHHHHH
Q 003963 668 GTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNS--------MQVIGAVGFMNQRLEIPKDVDPRWAAIV 739 (783)
Q Consensus 668 Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~elltG~~Pf~~~~~--------~~~~~~i~~~~~~~~~~~~~s~~l~~LI 739 (783)
||+.|+|||++.+..++.++|||||||++|+|++|+.||..... ....... .......+|..++.++.+||
T Consensus 158 gt~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~-~~~~~~~~p~~~~~~~~~li 236 (329)
T cd05588 158 GTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGMSDNPDQNTEDYLFQV-ILEKQIRIPRSLSVKASSVL 236 (329)
T ss_pred CCccccCHHHHcCCCCCCccceechHHHHHHHHHCCCCcccccccccccccchHHHHHH-HHcCCCCCCCCCCHHHHHHH
Confidence 99999999999999999999999999999999999999963211 1111111 12345567888999999999
Q ss_pred HHhhhhCCCCCCC------HHHHHHHHHHHHHHHhhc
Q 003963 740 ESCWHSDPQCRPS------FQELVDKLRDLQRQYFQA 770 (783)
Q Consensus 740 ~~cL~~dP~~RPs------a~ell~~L~~L~~~~f~~ 770 (783)
.+||..||.+|++ +.++ +.|+||+.
T Consensus 237 ~~~L~~dP~~R~~~~~~~~~~~i------~~hp~~~~ 267 (329)
T cd05588 237 KGFLNKDPKERLGCHPQTGFRDI------KSHPFFRN 267 (329)
T ss_pred HHHhccCHHHcCCCCCCCCHHHH------hcCCCCCC
Confidence 9999999999997 5666 67888854
No 93
>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul
Probab=100.00 E-value=2.5e-39 Score=358.45 Aligned_cols=257 Identities=23% Similarity=0.371 Sum_probs=215.6
Q ss_pred cceeEeeeeccCCcEEEEEEEEeC-CceEEEEEEecccC-CHHHHHHHHHHHHHHHhCCCCceeeEeceeecCCceEEEE
Q 003963 505 EDLTIGEQIGQGSCGTVYHAVWYG-SQDVAVKVFSRQEY-SDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIVT 582 (783)
Q Consensus 505 ~~y~i~~~LG~G~fG~Vy~a~~~~-~~~vAiK~i~~~~~-~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lV~ 582 (783)
++|++.+.||+|+||.||++.+.. ++.||||++..... .......+..|+.++..++||||+++++.+...+.+|+||
T Consensus 1 ~~f~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~~~lv~ 80 (360)
T cd05627 1 DDFESLKVIGRGAFGEVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEADGAWVVKMFYSFQDKRNLYLIM 80 (360)
T ss_pred CCceEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEE
Confidence 478999999999999999999865 56799999975432 2345567888999999999999999999999999999999
Q ss_pred EecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCccccccc--
Q 003963 583 EFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETY-- 660 (783)
Q Consensus 583 E~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~-- 660 (783)
|||++|+|.+++.+. ..+++..+..++.||+.||+|||+++ |+||||||+||||+.++.++|+|||++.......
T Consensus 81 E~~~gg~L~~~l~~~-~~l~~~~~~~~~~qi~~~L~~lH~~g--ivHrDLkp~NIli~~~~~vkL~DfG~~~~~~~~~~~ 157 (360)
T cd05627 81 EFLPGGDMMTLLMKK-DTLSEEATQFYIAETVLAIDAIHQLG--FIHRDIKPDNLLLDAKGHVKLSDFGLCTGLKKAHRT 157 (360)
T ss_pred eCCCCccHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCC--eEccCCCHHHEEECCCCCEEEeeccCCccccccccc
Confidence 999999999999764 45899999999999999999999998 9999999999999999999999999986432110
Q ss_pred ---------------------------------ccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCC
Q 003963 661 ---------------------------------LTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWD 707 (783)
Q Consensus 661 ---------------------------------~~~~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~elltG~~Pf~ 707 (783)
......+||+.|+|||++.+..++.++|||||||++|+|++|++||.
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvilyel~tG~~Pf~ 237 (360)
T cd05627 158 EFYRNLTHNPPSDFSFQNMNSKRKAETWKKNRRQLAYSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPPFC 237 (360)
T ss_pred ccccccccCCcccccccccccccccccccccccccccccCCCccccCHHHHcCCCCCCcceeccccceeeecccCCCCCC
Confidence 00123479999999999999999999999999999999999999999
Q ss_pred CCChHHHHHHhhcccccccCCC--CCCHHHHHHHHHhhhhCCCCCCC---HHHHHHHHHHHHHHHhhcC
Q 003963 708 NLNSMQVIGAVGFMNQRLEIPK--DVDPRWAAIVESCWHSDPQCRPS---FQELVDKLRDLQRQYFQAS 771 (783)
Q Consensus 708 ~~~~~~~~~~i~~~~~~~~~~~--~~s~~l~~LI~~cL~~dP~~RPs---a~ell~~L~~L~~~~f~~~ 771 (783)
..+.......+........+|. .+++++++||.+|+. ||.+|++ +.++ +.|+||+..
T Consensus 238 ~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~~li~~l~~-~p~~R~~~~~~~ei------~~hp~f~~~ 299 (360)
T cd05627 238 SETPQETYRKVMNWKETLVFPPEVPISEKAKDLILRFCT-DSENRIGSNGVEEI------KSHPFFEGV 299 (360)
T ss_pred CCCHHHHHHHHHcCCCceecCCCCCCCHHHHHHHHHhcc-ChhhcCCCCCHHHH------hcCCCCCCC
Confidence 8887776666543333334443 378999999999874 9999985 6677 689999753
No 94
>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h
Probab=100.00 E-value=2.1e-38 Score=333.10 Aligned_cols=250 Identities=34% Similarity=0.590 Sum_probs=214.9
Q ss_pred cceeEeeeeccCCcEEEEEEEEeCCceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEeceeecCCceEEEEEe
Q 003963 505 EDLTIGEQIGQGSCGTVYHAVWYGSQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIVTEF 584 (783)
Q Consensus 505 ~~y~i~~~LG~G~fG~Vy~a~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lV~E~ 584 (783)
++|++.+.||+|+||.||++.+.....+|+|.+....... ..+.+|+.+++.++||||+++++++......++||||
T Consensus 4 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~a~K~~~~~~~~~---~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv~e~ 80 (256)
T cd05114 4 SELTFMKELGSGQFGVVHLGKWRAQIKVAIKAINEGAMSE---EDFIEEAKVMMKLSHPKLVQLYGVCTQQKPLYIVTEF 80 (256)
T ss_pred HHcEEeeEecCCcCceEEEEEeccCceEEEEecccCCccH---HHHHHHHHHHHHCCCCCceeEEEEEccCCCEEEEEEc
Confidence 5789999999999999999998777789999886554332 4678899999999999999999999999999999999
Q ss_pred cCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCccccccccc-c
Q 003963 585 LPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETYLT-T 663 (783)
Q Consensus 585 ~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~~~-~ 663 (783)
+++++|.+++......+++..++.++.|++.||.|||+++ |+|+||||+||+++.++.+||+|||++......... .
T Consensus 81 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~--i~H~dl~p~ni~i~~~~~~kl~d~g~~~~~~~~~~~~~ 158 (256)
T cd05114 81 MENGCLLNYLRQRQGKLSKDMLLSMCQDVCEGMEYLERNS--FIHRDLAARNCLVSSTGVVKVSDFGMTRYVLDDEYTSS 158 (256)
T ss_pred CCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCC--ccccccCcceEEEcCCCeEEECCCCCccccCCCceecc
Confidence 9999999999765556899999999999999999999998 999999999999999999999999998754332211 1
Q ss_pred cCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCChHHHHHHhhcccccccCCCCCCHHHHHHHHHh
Q 003963 664 KTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELAT-EKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAAIVESC 742 (783)
Q Consensus 664 ~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~l~~LI~~c 742 (783)
....++..|+|||++.+..++.++||||||+++|+|++ |+.||...+..+....+... .....+...+..+.++|.+|
T Consensus 159 ~~~~~~~~y~aPE~~~~~~~~~~~Di~s~G~~l~el~~~g~~p~~~~~~~~~~~~i~~~-~~~~~~~~~~~~~~~li~~c 237 (256)
T cd05114 159 SGAKFPVKWSPPEVFNFSKYSSKSDVWSFGVLMWEVFTEGKMPFEKKSNYEVVEMISRG-FRLYRPKLASMTVYEVMYSC 237 (256)
T ss_pred CCCCCchhhCChhhcccCccchhhhhHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHCC-CCCCCCCCCCHHHHHHHHHH
Confidence 22235668999999998889999999999999999999 99999988877766665432 23445666889999999999
Q ss_pred hhhCCCCCCCHHHHHHHH
Q 003963 743 WHSDPQCRPSFQELVDKL 760 (783)
Q Consensus 743 L~~dP~~RPsa~ell~~L 760 (783)
|..+|.+||++.++++.|
T Consensus 238 ~~~~p~~Rps~~~l~~~l 255 (256)
T cd05114 238 WHEKPEGRPTFAELLRAI 255 (256)
T ss_pred ccCCcccCcCHHHHHHhh
Confidence 999999999999998775
No 95
>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in
Probab=100.00 E-value=4.3e-39 Score=350.35 Aligned_cols=250 Identities=26% Similarity=0.420 Sum_probs=209.8
Q ss_pred eeeccCCcEEEEEEEEeC-CceEEEEEEecccCC-HHHHHHHHHHHHHHHh-CCCCceeeEeceeecCCceEEEEEecCC
Q 003963 511 EQIGQGSCGTVYHAVWYG-SQDVAVKVFSRQEYS-DEVIHSFRQEVSLMKR-LRHPNVLLFMGAVTSPQRLCIVTEFLPR 587 (783)
Q Consensus 511 ~~LG~G~fG~Vy~a~~~~-~~~vAiK~i~~~~~~-~~~~~~~~~Ei~il~~-l~HpnIv~l~~~~~~~~~~~lV~E~~~g 587 (783)
+.||+|+||.||+|.+.. ++.||||++...... ......+..|..++.. ++||||+++++++...+.+|+||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~ey~~~ 80 (316)
T cd05619 1 KMLGKGSFGKVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHLYCTFQTKENLFFVMEYLNG 80 (316)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCcCcceEEEEEeCCEEEEEEeCCCC
Confidence 469999999999999865 467999999765321 2233456667888876 4899999999999999999999999999
Q ss_pred CCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCcccccccccccCCC
Q 003963 588 GSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETYLTTKTGK 667 (783)
Q Consensus 588 gsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~~ 667 (783)
|+|.+++... ..+++..+..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||++..............
T Consensus 81 g~L~~~l~~~-~~~~~~~~~~~~~qi~~al~~LH~~~--ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~ 157 (316)
T cd05619 81 GDLMFHIQSC-HKFDLPRATFYAAEIICGLQFLHSKG--IVYRDLKLDNILLDTDGHIKIADFGMCKENMLGDAKTCTFC 157 (316)
T ss_pred CcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHhCC--eEeCCCCHHHEEECCCCCEEEccCCcceECCCCCCceeeec
Confidence 9999999763 45889999999999999999999998 99999999999999999999999999875433222334557
Q ss_pred CCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhcccccccCCCCCCHHHHHHHHHhhhhCC
Q 003963 668 GTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAAIVESCWHSDP 747 (783)
Q Consensus 668 Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~l~~LI~~cL~~dP 747 (783)
||+.|+|||++.+..++.++|||||||++|+|++|..||...+..+....+... ...++..++.++.+||.+||..||
T Consensus 158 gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~~~~~~i~~~--~~~~~~~~~~~~~~li~~~l~~~P 235 (316)
T cd05619 158 GTPDYIAPEILLGQKYNTSVDWWSFGVLLYEMLIGQSPFHGHDEEELFQSIRMD--NPCYPRWLTREAKDILVKLFVREP 235 (316)
T ss_pred CCccccCHHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhC--CCCCCccCCHHHHHHHHHHhccCH
Confidence 899999999999999999999999999999999999999988877766665332 344667789999999999999999
Q ss_pred CCCCCHH-HHHHHHHHHHHHHhhcC
Q 003963 748 QCRPSFQ-ELVDKLRDLQRQYFQAS 771 (783)
Q Consensus 748 ~~RPsa~-ell~~L~~L~~~~f~~~ 771 (783)
.+||++. ++ ++|+||+..
T Consensus 236 ~~R~~~~~~l------~~h~~~~~~ 254 (316)
T cd05619 236 ERRLGVKGDI------RQHPFFREI 254 (316)
T ss_pred hhcCCChHHH------HcCcccCCC
Confidence 9999997 55 567777553
No 96
>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.2e-40 Score=362.30 Aligned_cols=250 Identities=32% Similarity=0.531 Sum_probs=221.9
Q ss_pred eeccCCcEEEEEEEEeCCc-eEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEeceeecCCceEEEEEecCCCCH
Q 003963 512 QIGQGSCGTVYHAVWYGSQ-DVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIVTEFLPRGSL 590 (783)
Q Consensus 512 ~LG~G~fG~Vy~a~~~~~~-~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lV~E~~~ggsL 590 (783)
+||+|+||+||-|++..++ .+|||-+.... ....+.+..|+.+.++|+|.|||+++|.+..++++-|.||-++||+|
T Consensus 582 VLGKGTYG~VYA~RD~~tqvrIaIKEIpekd--sr~~QPLhEEIaLH~~LrHkNIVrYLGs~senGf~kIFMEqVPGGSL 659 (1226)
T KOG4279|consen 582 VLGKGTYGTVYAARDMDTQVRIAIKEIPEKD--SREVQPLHEEIALHSTLRHKNIVRYLGSVSENGFFKIFMEQVPGGSL 659 (1226)
T ss_pred EeecCceeEEEeeccccceeEEEeeeccccc--chhhccHHHHHHHHHHHhhHhHHHHhhccCCCCeEEEEeecCCCCcH
Confidence 6899999999999998764 58999886544 23457889999999999999999999999999999999999999999
Q ss_pred HHHHhhcCCcc--hHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEc-CCCcEEEEecCCCcccccccccccCCC
Q 003963 591 FRLLQRNTTKL--DWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVD-KHWTVKVGDFGLSRLKHETYLTTKTGK 667 (783)
Q Consensus 591 ~~~L~~~~~~l--~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~-~~~~vkL~DFGla~~~~~~~~~~~~~~ 667 (783)
..+|+..=.++ .+...-.+.+||++||.|||++. |||||||-+||||+ ..|.+||+|||.++........+.++.
T Consensus 660 SsLLrskWGPlKDNEstm~fYtkQILeGLkYLHen~--IVHRDIKGDNVLvNTySGvlKISDFGTsKRLAginP~TETFT 737 (1226)
T KOG4279|consen 660 SSLLRSKWGPLKDNESTMNFYTKQILEGLKYLHENK--IVHRDIKGDNVLVNTYSGVLKISDFGTSKRLAGINPCTETFT 737 (1226)
T ss_pred HHHHHhccCCCccchhHHHHHHHHHHHHhhhhhhcc--eeeccccCCcEEEeeccceEEecccccchhhccCCccccccc
Confidence 99998765566 88899999999999999999998 99999999999996 579999999999988776667778899
Q ss_pred CCCcccCcccccCCC--CCchhHHHHHHHHHHHHHcCCCCCCCCChHH-HHHHhhcccccccCCCCCCHHHHHHHHHhhh
Q 003963 668 GTPQWMAPEVLRNEP--SDEKSDVYSFGVILWELATEKIPWDNLNSMQ-VIGAVGFMNQRLEIPKDVDPRWAAIVESCWH 744 (783)
Q Consensus 668 Gt~~Y~aPE~~~~~~--~s~~sDIwSLG~il~elltG~~Pf~~~~~~~-~~~~i~~~~~~~~~~~~~s~~l~~LI~~cL~ 744 (783)
||..|||||++..++ |+.++|||||||++.||.||++||..+...+ ....+......+++|..++.+++.||.+|+.
T Consensus 738 GTLQYMAPEvIDqG~RGYG~aADIWS~GCT~vEMATGrPPF~ElgspqAAMFkVGmyKvHP~iPeelsaeak~FilrcFe 817 (1226)
T KOG4279|consen 738 GTLQYMAPEVIDQGPRGYGKAADIWSFGCTMVEMATGRPPFVELGSPQAAMFKVGMYKVHPPIPEELSAEAKNFILRCFE 817 (1226)
T ss_pred cchhhhChHhhccCCcCCCchhhhhhccceeEeeccCCCCeeecCChhHhhhhhcceecCCCCcHHHHHHHHHHHHHHcC
Confidence 999999999997654 7889999999999999999999998775443 4456666777899999999999999999999
Q ss_pred hCCCCCCCHHHHHHHHHHHHHHHhhcC
Q 003963 745 SDPQCRPSFQELVDKLRDLQRQYFQAS 771 (783)
Q Consensus 745 ~dP~~RPsa~ell~~L~~L~~~~f~~~ 771 (783)
+||..||++.++ |+++|.|-+
T Consensus 818 pd~~~R~sA~~L------L~DpFlq~~ 838 (1226)
T KOG4279|consen 818 PDPCDRPSAKDL------LQDPFLQHN 838 (1226)
T ss_pred CCcccCccHHHh------ccCcccccC
Confidence 999999999999 788888665
No 97
>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk. Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom
Probab=100.00 E-value=6.7e-39 Score=337.33 Aligned_cols=258 Identities=32% Similarity=0.583 Sum_probs=222.5
Q ss_pred cccccceeEeeeeccCCcEEEEEEEEeCCceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEeceeecCCceEE
Q 003963 501 EILWEDLTIGEQIGQGSCGTVYHAVWYGSQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCI 580 (783)
Q Consensus 501 e~~~~~y~i~~~LG~G~fG~Vy~a~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~l 580 (783)
|....+|++.++||.|+||.||+|.+..++.+++|++..... .....+..|+.+++.++||||+++++++......++
T Consensus 2 ~~~~~~y~~~~~ig~g~~~~vy~~~~~~~~~~~~k~~~~~~~--~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l 79 (261)
T cd05148 2 ERPREEFTLERKLGSGYFGEVWEGLWKNRVRVAIKILKSDDL--LKQQDFQKEVQALKRLRHKHLISLFAVCSVGEPVYI 79 (261)
T ss_pred cCcHHHHHHhhhhccCCCccEEEeEecCCCcEEEEeccccch--hhHHHHHHHHHHHhcCCCcchhheeeeEecCCCeEE
Confidence 344568999999999999999999988888899999876543 234568889999999999999999999999999999
Q ss_pred EEEecCCCCHHHHHhhc-CCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCcccccc
Q 003963 581 VTEFLPRGSLFRLLQRN-TTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHET 659 (783)
Q Consensus 581 V~E~~~ggsL~~~L~~~-~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~~~ 659 (783)
||||+++++|.+++... ...+++..++.++.||+.||.|||+.+ |+|+||||+||+|+.++.+||+|||++......
T Consensus 80 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~--i~h~dl~~~nilv~~~~~~kl~d~g~~~~~~~~ 157 (261)
T cd05148 80 ITELMEKGSLLAFLRSPEGQVLPVASLIDMACQVAEGMAYLEEQN--SIHRDLAARNILVGEDLVCKVADFGLARLIKED 157 (261)
T ss_pred EEeecccCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCC--eeccccCcceEEEcCCceEEEccccchhhcCCc
Confidence 99999999999999753 345889999999999999999999998 999999999999999999999999999766544
Q ss_pred cccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCChHHHHHHhhcccccccCCCCCCHHHHHH
Q 003963 660 YLTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELAT-EKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAAI 738 (783)
Q Consensus 660 ~~~~~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~l~~L 738 (783)
........++..|++||.+.+..++.++|||||||++|+|++ |+.||...+....+..+. .......+..+++.+.++
T Consensus 158 ~~~~~~~~~~~~~~~PE~~~~~~~~~~~DiwslG~~l~~l~~~g~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 236 (261)
T cd05148 158 VYLSSDKKIPYKWTAPEAASHGTFSTKSDVWSFGILLYEMFTYGQVPYPGMNNHEVYDQIT-AGYRMPCPAKCPQEIYKI 236 (261)
T ss_pred cccccCCCCceEecCHHHHccCCCCchhhHHHHHHHHHHHHcCCCCCCCcCCHHHHHHHHH-hCCcCCCCCCCCHHHHHH
Confidence 333334456778999999998889999999999999999998 899998887766666554 233456677899999999
Q ss_pred HHHhhhhCCCCCCCHHHHHHHHHHH
Q 003963 739 VESCWHSDPQCRPSFQELVDKLRDL 763 (783)
Q Consensus 739 I~~cL~~dP~~RPsa~ell~~L~~L 763 (783)
|.+||+.||.+|||+.++++.|+.+
T Consensus 237 i~~~l~~~p~~Rpt~~~l~~~L~~~ 261 (261)
T cd05148 237 MLECWAAEPEDRPSFKALREELDNI 261 (261)
T ss_pred HHHHcCCCchhCcCHHHHHHHHhcC
Confidence 9999999999999999999998753
No 98
>PTZ00283 serine/threonine protein kinase; Provisional
Probab=100.00 E-value=2.8e-38 Score=363.96 Aligned_cols=255 Identities=27% Similarity=0.397 Sum_probs=217.5
Q ss_pred ccccceeEeeeeccCCcEEEEEEEEeC-CceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEeceeecCC----
Q 003963 502 ILWEDLTIGEQIGQGSCGTVYHAVWYG-SQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQ---- 576 (783)
Q Consensus 502 ~~~~~y~i~~~LG~G~fG~Vy~a~~~~-~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~---- 576 (783)
...++|.+.+.||+|+||.||++.+.. ++.||||++............+.+|+.++..++|+||++++..+...+
T Consensus 29 ~~~~rY~i~~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~~~h~~iv~~~~~~~~~~~~~~ 108 (496)
T PTZ00283 29 EQAKKYWISRVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGMSEADKNRAQAEVCCLLNCDFFSIVKCHEDFAKKDPRNP 108 (496)
T ss_pred ccCCCEEEEEEEecCCCEEEEEEEEcCCCCEEEEEEEecccCCHHHHHHHHHHHHHHhcCCCCcEEEeecceecccccCc
Confidence 345799999999999999999998754 578999999877766666778889999999999999999988775432
Q ss_pred ----ceEEEEEecCCCCHHHHHhhc---CCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEe
Q 003963 577 ----RLCIVTEFLPRGSLFRLLQRN---TTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGD 649 (783)
Q Consensus 577 ----~~~lV~E~~~ggsL~~~L~~~---~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~D 649 (783)
.+++||||+++|+|.+++... ...+++..++.++.|++.||+|||+.+ |+||||||+||||+.++.+||+|
T Consensus 109 ~~~~~i~lV~Ey~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~aL~~lH~~~--IiHrDLKP~NILl~~~~~vkL~D 186 (496)
T PTZ00283 109 ENVLMIALVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAVHHVHSKH--MIHRDIKSANILLCSNGLVKLGD 186 (496)
T ss_pred ccceEEEEEEeCCCCCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhCC--EecCCCCHHHEEEeCCCCEEEEe
Confidence 368999999999999998642 346889999999999999999999998 99999999999999999999999
Q ss_pred cCCCcccccc--cccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhcccccccC
Q 003963 650 FGLSRLKHET--YLTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLEI 727 (783)
Q Consensus 650 FGla~~~~~~--~~~~~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~ 727 (783)
||+++..... .......+||+.|+|||++.+..++.++|||||||+||+|++|+.||...+....+..+.. .....+
T Consensus 187 FGls~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~s~k~DVwSlGvilyeLltG~~Pf~~~~~~~~~~~~~~-~~~~~~ 265 (496)
T PTZ00283 187 FGFSKMYAATVSDDVGRTFCGTPYYVAPEIWRRKPYSKKADMFSLGVLLYELLTLKRPFDGENMEEVMHKTLA-GRYDPL 265 (496)
T ss_pred cccCeeccccccccccccccCCcceeCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhc-CCCCCC
Confidence 9998765432 1123355799999999999999999999999999999999999999998877666555432 223456
Q ss_pred CCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHH
Q 003963 728 PKDVDPRWAAIVESCWHSDPQCRPSFQELVDK 759 (783)
Q Consensus 728 ~~~~s~~l~~LI~~cL~~dP~~RPsa~ell~~ 759 (783)
+..+++++.+||.+||..||.+||++.+++++
T Consensus 266 ~~~~~~~l~~li~~~L~~dP~~RPs~~ell~~ 297 (496)
T PTZ00283 266 PPSISPEMQEIVTALLSSDPKRRPSSSKLLNM 297 (496)
T ss_pred CCCCCHHHHHHHHHHcccChhhCcCHHHHHhC
Confidence 78899999999999999999999999999643
No 99
>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play
Probab=100.00 E-value=1.3e-38 Score=344.72 Aligned_cols=259 Identities=23% Similarity=0.334 Sum_probs=212.5
Q ss_pred ccceeEeeeeccCCcEEEEEEEEeC-CceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEeceeecCCceEEEE
Q 003963 504 WEDLTIGEQIGQGSCGTVYHAVWYG-SQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIVT 582 (783)
Q Consensus 504 ~~~y~i~~~LG~G~fG~Vy~a~~~~-~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lV~ 582 (783)
.++|.+.++||+|+||.||+|.+.. ++.||+|++...... .....+.+|+.+++.++||||+++++++..++..++||
T Consensus 5 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 83 (309)
T cd07872 5 METYIKLEKLGEGTYATVFKGRSKLTENLVALKEIRLEHEE-GAPCTAIREVSLLKDLKHANIVTLHDIVHTDKSLTLVF 83 (309)
T ss_pred CCceEEEEEecccCCEEEEEEEecCCCCeEEEEEeeccccC-CcchhHHHHHHHHHhCCCCCcceEEEEEeeCCeEEEEE
Confidence 3679999999999999999999864 467999998754322 22345678999999999999999999999999999999
Q ss_pred EecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCccccccccc
Q 003963 583 EFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETYLT 662 (783)
Q Consensus 583 E~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~~~ 662 (783)
||+++ +|.+++......+++..+..++.||+.||+|||+++ |+||||||+|||++.++.+||+|||++.........
T Consensus 84 e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~--ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~ 160 (309)
T cd07872 84 EYLDK-DLKQYMDDCGNIMSMHNVKIFLYQILRGLAYCHRRK--VLHRDLKPQNLLINERGELKLADFGLARAKSVPTKT 160 (309)
T ss_pred eCCCC-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC--eecCCCCHHHEEECCCCCEEECccccceecCCCccc
Confidence 99965 898888776666889999999999999999999998 999999999999999999999999998765443333
Q ss_pred ccCCCCCCcccCcccccC-CCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhcccc-----------------c
Q 003963 663 TKTGKGTPQWMAPEVLRN-EPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQ-----------------R 724 (783)
Q Consensus 663 ~~~~~Gt~~Y~aPE~~~~-~~~s~~sDIwSLG~il~elltG~~Pf~~~~~~~~~~~i~~~~~-----------------~ 724 (783)
.....+++.|+|||++.+ ..++.++|||||||++|+|++|++||...+..+....+..... .
T Consensus 161 ~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (309)
T cd07872 161 YSNEVVTLWYRPPDVLLGSSEYSTQIDMWGVGCIFFEMASGRPLFPGSTVEDELHLIFRLLGTPTEETWPGISSNDEFKN 240 (309)
T ss_pred cccccccccccCCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhhcchhhhhh
Confidence 334567899999998865 4578999999999999999999999987765443332211100 0
Q ss_pred c-----------cCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhcCc
Q 003963 725 L-----------EIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQASR 772 (783)
Q Consensus 725 ~-----------~~~~~~s~~l~~LI~~cL~~dP~~RPsa~ell~~L~~L~~~~f~~~~ 772 (783)
. .....+++++.+||.+||..||.+|||+.++ ++|+||+...
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~------l~h~~~~~~~ 293 (309)
T cd07872 241 YNFPKYKPQPLINHAPRLDTEGIELLTKFLQYESKKRISAEEA------MKHAYFRSLG 293 (309)
T ss_pred hhcCccCCCchhhhccCCCHHHHHHHHHhccCChhhCCCHHHH------hcChhhhhcc
Confidence 0 1113478899999999999999999999999 6799998754
No 100
>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g
Probab=100.00 E-value=1.2e-38 Score=340.35 Aligned_cols=251 Identities=23% Similarity=0.356 Sum_probs=207.7
Q ss_pred eccCCcEEEEEEEEeC-CceEEEEEEecccCCH-HHHHHHHHHHHHHHhCCCCceeeEeceeecCCceEEEEEecCCCCH
Q 003963 513 IGQGSCGTVYHAVWYG-SQDVAVKVFSRQEYSD-EVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIVTEFLPRGSL 590 (783)
Q Consensus 513 LG~G~fG~Vy~a~~~~-~~~vAiK~i~~~~~~~-~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lV~E~~~ggsL 590 (783)
||+|+||.||++.+.. ++.||+|++....... .....+..|+.+++.++||||+++++++.....+|+||||+++|+|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~g~L 80 (280)
T cd05608 1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVHSRFIVSLAYAFQTKTDLCLVMTIMNGGDL 80 (280)
T ss_pred CCCCCceeEEEEEEccCCcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhCCCCcEeeeeEEEcCCCeEEEEEeCCCCCCH
Confidence 7999999999998764 5689999987654332 3345677899999999999999999999999999999999999999
Q ss_pred HHHHhh---cCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCcccccccccccCCC
Q 003963 591 FRLLQR---NTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETYLTTKTGK 667 (783)
Q Consensus 591 ~~~L~~---~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~~ 667 (783)
..++.. ....+++..++.++.||+.||.|||+++ |+||||||+|||++.++.++|+|||++..............
T Consensus 81 ~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~--i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~ 158 (280)
T cd05608 81 RYHIYNVDEENPGFPEPRACFYTAQIISGLEHLHQRR--IIYRDLKPENVLLDNDGNVRISDLGLAVELKDGQSKTKGYA 158 (280)
T ss_pred HHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHCC--cccCCCCHHHEEECCCCCEEEeeCccceecCCCCccccccC
Confidence 888743 2345899999999999999999999998 99999999999999999999999999876554333334457
Q ss_pred CCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHh--hcccccccCCCCCCHHHHHHHHHhhhh
Q 003963 668 GTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAV--GFMNQRLEIPKDVDPRWAAIVESCWHS 745 (783)
Q Consensus 668 Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~elltG~~Pf~~~~~~~~~~~i--~~~~~~~~~~~~~s~~l~~LI~~cL~~ 745 (783)
|++.|+|||++.+..++.++|||||||++|+|++|+.||...........+ ........++..+++.+.+|+.+||+.
T Consensus 159 g~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~ 238 (280)
T cd05608 159 GTPGFMAPELLQGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRILNDSVTYPDKFSPASKSFCEALLAK 238 (280)
T ss_pred CCcCccCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCcchhHHHHHHhhcccCCCCcccCCHHHHHHHHHHhcC
Confidence 899999999999999999999999999999999999999765332111111 112234456677899999999999999
Q ss_pred CCCCCC-----CHHHHHHHHHHHHHHHhhcC
Q 003963 746 DPQCRP-----SFQELVDKLRDLQRQYFQAS 771 (783)
Q Consensus 746 dP~~RP-----sa~ell~~L~~L~~~~f~~~ 771 (783)
||.+|| ++.++ +.|+||+..
T Consensus 239 ~P~~R~~~~~~~~~~~------l~h~~~~~~ 263 (280)
T cd05608 239 DPEKRLGFRDGNCDGL------RTHPLFRDL 263 (280)
T ss_pred CHHHhcCCCCCCHHHH------hcChhhhcC
Confidence 999999 66777 568999764
No 101
>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a
Probab=100.00 E-value=8.2e-39 Score=349.15 Aligned_cols=259 Identities=24% Similarity=0.404 Sum_probs=215.8
Q ss_pred ceeEeeeeccCCcEEEEEEEEeC-CceEEEEEEecccC-CHHHHHHHHHHHHHHHhCC-CCceeeEeceeecCCceEEEE
Q 003963 506 DLTIGEQIGQGSCGTVYHAVWYG-SQDVAVKVFSRQEY-SDEVIHSFRQEVSLMKRLR-HPNVLLFMGAVTSPQRLCIVT 582 (783)
Q Consensus 506 ~y~i~~~LG~G~fG~Vy~a~~~~-~~~vAiK~i~~~~~-~~~~~~~~~~Ei~il~~l~-HpnIv~l~~~~~~~~~~~lV~ 582 (783)
+|++.+.||+|+||.||+|.+.. ++.||||++.+... .......+..|+.++..+. |++|+++++++...+.+|+||
T Consensus 1 ~f~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (323)
T cd05615 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPFLTQLHSCFQTVDRLYFVM 80 (323)
T ss_pred CceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCchhheeeEEecCCEEEEEE
Confidence 47888999999999999999765 56799999976532 2234456778899998886 577888999999999999999
Q ss_pred EecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCccccccccc
Q 003963 583 EFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETYLT 662 (783)
Q Consensus 583 E~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~~~ 662 (783)
||+++|+|.+++... ..+++..++.++.||+.||.|||+++ |+||||||+|||++.++.+||+|||++.........
T Consensus 81 Ey~~~g~L~~~i~~~-~~l~~~~~~~i~~qi~~al~~lH~~~--ivHrDikp~Nill~~~~~ikL~Dfg~~~~~~~~~~~ 157 (323)
T cd05615 81 EYVNGGDLMYHIQQV-GKFKEPQAVFYAAEISVGLFFLHRRG--IIYRDLKLDNVMLDSEGHIKIADFGMCKEHMVDGVT 157 (323)
T ss_pred cCCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCC--eeccCCCHHHeEECCCCCEEEeccccccccCCCCcc
Confidence 999999999998764 45899999999999999999999998 999999999999999999999999998754333333
Q ss_pred ccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhcccccccCCCCCCHHHHHHHHHh
Q 003963 663 TKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAAIVESC 742 (783)
Q Consensus 663 ~~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~l~~LI~~c 742 (783)
.....||+.|+|||++.+..++.++|||||||++|+|++|..||...+.......+. .....+|..++.++.+++.+|
T Consensus 158 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~~~~~~i~--~~~~~~p~~~~~~~~~li~~~ 235 (323)
T cd05615 158 TRTFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDEDELFQSIM--EHNVSYPKSLSKEAVSICKGL 235 (323)
T ss_pred ccCccCCccccCHHHHcCCCCCCccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHH--hCCCCCCccCCHHHHHHHHHH
Confidence 445578999999999999999999999999999999999999999888776666653 334567788999999999999
Q ss_pred hhhCCCCCCCHHH-HHHHHHHHHHHHhhcC
Q 003963 743 WHSDPQCRPSFQE-LVDKLRDLQRQYFQAS 771 (783)
Q Consensus 743 L~~dP~~RPsa~e-ll~~L~~L~~~~f~~~ 771 (783)
|.++|.+|++..+ ..+.+ +.|+||+..
T Consensus 236 l~~~p~~R~~~~~~~~~~i--~~h~~f~~~ 263 (323)
T cd05615 236 MTKHPSKRLGCGPEGERDI--REHAFFRRI 263 (323)
T ss_pred cccCHhhCCCCCCCCHHHH--hcCcccCCC
Confidence 9999999997432 11222 577888653
No 102
>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt
Probab=100.00 E-value=2.8e-39 Score=353.01 Aligned_cols=253 Identities=28% Similarity=0.414 Sum_probs=207.9
Q ss_pred eeeccCCcEEEEEEEEeCC-ceEEEEEEecccCC-HHHHHHHHHHH-HHHHhCCCCceeeEeceeecCCceEEEEEecCC
Q 003963 511 EQIGQGSCGTVYHAVWYGS-QDVAVKVFSRQEYS-DEVIHSFRQEV-SLMKRLRHPNVLLFMGAVTSPQRLCIVTEFLPR 587 (783)
Q Consensus 511 ~~LG~G~fG~Vy~a~~~~~-~~vAiK~i~~~~~~-~~~~~~~~~Ei-~il~~l~HpnIv~l~~~~~~~~~~~lV~E~~~g 587 (783)
+.||+|+||.||+|.+..+ +.||+|++...... ......+..|. .+++.++||||+++++++...+.+|+||||+++
T Consensus 1 ~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~Iv~~~~~~~~~~~~~lv~e~~~~ 80 (325)
T cd05602 1 KVIGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYING 80 (325)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCceeEEEEcCCeEEEEEeCCCC
Confidence 4699999999999998654 57999999764322 12223344444 457889999999999999999999999999999
Q ss_pred CCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCcccccccccccCCC
Q 003963 588 GSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETYLTTKTGK 667 (783)
Q Consensus 588 gsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~~ 667 (783)
++|.+++... ..+.+..+..++.||+.||.|||++| |+||||||+|||++.++.+||+|||+++............+
T Consensus 81 ~~L~~~~~~~-~~~~~~~~~~~~~qi~~~L~~lH~~g--iiHrDlkp~Nili~~~~~~kl~DfG~a~~~~~~~~~~~~~~ 157 (325)
T cd05602 81 GELFYHLQRE-RCFLEPRARFYAAEIASALGYLHSLN--IVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNGTTSTFC 157 (325)
T ss_pred CcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCC--eEecCCCHHHeEECCCCCEEEccCCCCcccccCCCCccccc
Confidence 9999999764 45788888999999999999999998 99999999999999999999999999875433333344567
Q ss_pred CCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhcccccccCCCCCCHHHHHHHHHhhhhCC
Q 003963 668 GTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAAIVESCWHSDP 747 (783)
Q Consensus 668 Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~l~~LI~~cL~~dP 747 (783)
||+.|+|||++.+..++.++|||||||++|+|++|.+||...+..+.+..+. .....++..+++.+.++|.+||++||
T Consensus 158 gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~--~~~~~~~~~~~~~~~~li~~~l~~~p 235 (325)
T cd05602 158 GTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNIL--NKPLQLKPNITNSARHLLEGLLQKDR 235 (325)
T ss_pred CCccccCHHHHcCCCCCCccccccccHHHHHHhcCCCCCCCCCHHHHHHHHH--hCCcCCCCCCCHHHHHHHHHHcccCH
Confidence 9999999999999999999999999999999999999999888776665552 23445667899999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHhhc
Q 003963 748 QCRPSFQELVDKLRDLQRQYFQA 770 (783)
Q Consensus 748 ~~RPsa~ell~~L~~L~~~~f~~ 770 (783)
.+||++.+.+..+ +.|+||..
T Consensus 236 ~~R~~~~~~~~~i--~~~~~~~~ 256 (325)
T cd05602 236 TKRLGAKDDFMEI--KNHIFFSP 256 (325)
T ss_pred HHCCCCCCCHHHH--hcCcccCC
Confidence 9999887554333 45666643
No 103
>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a
Probab=100.00 E-value=3e-38 Score=332.82 Aligned_cols=258 Identities=33% Similarity=0.567 Sum_probs=219.4
Q ss_pred ccccccceeEeeeeccCCcEEEEEEEEeCCceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEeceeecCCceE
Q 003963 500 YEILWEDLTIGEQIGQGSCGTVYHAVWYGSQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLC 579 (783)
Q Consensus 500 ~e~~~~~y~i~~~LG~G~fG~Vy~a~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~ 579 (783)
|++..++|++.+.||+|+||.||+|.+..++.||+|.+...... ...+.+|+.+++.++||||+++++++...+..+
T Consensus 1 ~~~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~v~iK~~~~~~~~---~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 77 (261)
T cd05068 1 WEIDRTSIQLLRKLGAGQFGEVWEGLWNNTTPVAVKTLKPGTMD---PKDFLAEAQIMKKLRHPKLIQLYAVCTLEEPIY 77 (261)
T ss_pred CccchhheeeEEEecccCCccEEEEEecCCeEEEEEeeCCCccc---HHHHHHHHHHHHHCCCCCccceeEEEecCCCee
Confidence 34566789999999999999999999877778999998754432 356788999999999999999999999999999
Q ss_pred EEEEecCCCCHHHHHhhcC-CcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCccccc
Q 003963 580 IVTEFLPRGSLFRLLQRNT-TKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHE 658 (783)
Q Consensus 580 lV~E~~~ggsL~~~L~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~~ 658 (783)
++|||+++++|.+++.... ..+++..+..++.|++.||.|||+++ |+|+||||+||+++.++.++|+|||++.....
T Consensus 78 lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~--i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~ 155 (261)
T cd05068 78 IVTELMKYGSLLEYLQGGAGRALKLPQLIDMAAQVASGMAYLEAQN--YIHRDLAARNVLVGENNICKVADFGLARVIKE 155 (261)
T ss_pred eeeecccCCcHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCC--eeeccCCcceEEEcCCCCEEECCcceEEEccC
Confidence 9999999999999997543 46899999999999999999999998 99999999999999999999999999876553
Q ss_pred ccccc-cCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCChHHHHHHhhcccccccCCCCCCHHHH
Q 003963 659 TYLTT-KTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELAT-EKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWA 736 (783)
Q Consensus 659 ~~~~~-~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~l~ 736 (783)
..... .....+..|+|||.+.+..++.++|||||||++|+|++ |+.||...........+.. ......+..++..+.
T Consensus 156 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 234 (261)
T cd05068 156 DIYEAREGAKFPIKWTAPEAALYNRFSIKSDVWSFGILLTEIVTYGRMPYPGMTNAEVLQQVDQ-GYRMPCPPGCPKELY 234 (261)
T ss_pred CcccccCCCcCceeccCccccccCCCCchhhHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHc-CCCCCCCCcCCHHHH
Confidence 32111 11123457999999999899999999999999999999 9999988877766655532 233455667899999
Q ss_pred HHHHHhhhhCCCCCCCHHHHHHHHHHH
Q 003963 737 AIVESCWHSDPQCRPSFQELVDKLRDL 763 (783)
Q Consensus 737 ~LI~~cL~~dP~~RPsa~ell~~L~~L 763 (783)
+++.+||+.+|.+||++.+++..|+++
T Consensus 235 ~li~~~l~~~P~~Rp~~~~l~~~l~~~ 261 (261)
T cd05068 235 DIMLDCWKEDPDDRPTFETLQWKLEDF 261 (261)
T ss_pred HHHHHHhhcCcccCCCHHHHHHHHhcC
Confidence 999999999999999999999988753
No 104
>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]
Probab=100.00 E-value=3.6e-39 Score=337.65 Aligned_cols=261 Identities=27% Similarity=0.351 Sum_probs=216.6
Q ss_pred ccceeEeeeeccCCcEEEEEEEEeC-CceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCc-eeeEeceeecCC-----
Q 003963 504 WEDLTIGEQIGQGSCGTVYHAVWYG-SQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPN-VLLFMGAVTSPQ----- 576 (783)
Q Consensus 504 ~~~y~i~~~LG~G~fG~Vy~a~~~~-~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~Hpn-Iv~l~~~~~~~~----- 576 (783)
...|..+++||+|+||+||+|+.+. ++.||+|++......+..-....+|+.+|+.|+|+| ||.+++++....
T Consensus 10 ~~~~~~~eklGeGtyg~Vykar~~~~g~~VALKkirl~~~~EG~P~taiREisllk~L~~~~~iv~L~dv~~~~~~~~~~ 89 (323)
T KOG0594|consen 10 MFDYEKVEKLGEGTYGVVYKARSKRTGKFVALKKIRLEFEEEGVPSTAIREISLLKRLSHANHIVRLHDVIHTSNNHRGI 89 (323)
T ss_pred HHHHHHHHHhCCCCceEEEEEEEecCCCEEEEEEEeccccccCCCchhhHHHHHHHHhCCCcceEEEEeeeeeccccccc
Confidence 4567778889999999999999865 467999999776543333356678999999999999 999999998777
Q ss_pred -ceEEEEEecCCCCHHHHHhhcC---CcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCC
Q 003963 577 -RLCIVTEFLPRGSLFRLLQRNT---TKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGL 652 (783)
Q Consensus 577 -~~~lV~E~~~ggsL~~~L~~~~---~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGl 652 (783)
.+++||||+. -+|..++.... ..++...+..+++||+.||+|||+++ |+||||||.||||++.|.+||+|||+
T Consensus 90 ~~l~lvfe~~d-~DL~~ymd~~~~~~~g~~~~~ik~~m~Qll~gl~~~H~~~--IlHRDLKPQNlLi~~~G~lKlaDFGl 166 (323)
T KOG0594|consen 90 GKLYLVFEFLD-RDLKKYMDSLPKKPQGLPPRLIKSFMRQLLRGLAFLHSHG--ILHRDLKPQNLLISSSGVLKLADFGL 166 (323)
T ss_pred ceEEEEEEeec-ccHHHHHHhccccccCCCHHHHHHHHHHHHHHHHHHHhCC--eecccCCcceEEECCCCcEeeeccch
Confidence 7999999995 59999998765 45788899999999999999999999 99999999999999999999999999
Q ss_pred CcccccccccccCCCCCCcccCcccccCC-CCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhcccccc------
Q 003963 653 SRLKHETYLTTKTGKGTPQWMAPEVLRNE-PSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRL------ 725 (783)
Q Consensus 653 a~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~-~~s~~sDIwSLG~il~elltG~~Pf~~~~~~~~~~~i~~~~~~~------ 725 (783)
|+...-+.......++|..|+|||++.|. .|+...||||+||+++||+++++-|.+......+..+-...+.+
T Consensus 167 Ara~~ip~~~yt~evvTlWYRaPEvLlGs~~Ys~~vDiWs~GcIfaEm~~~~~LFpG~se~~ql~~If~~lGtP~e~~Wp 246 (323)
T KOG0594|consen 167 ARAFSIPMRTYTPEVVTLWYRAPEVLLGSTSYSTSVDIWSLGCIFAEMFTRRPLFPGDSEIDQLFRIFRLLGTPNEKDWP 246 (323)
T ss_pred HHHhcCCcccccccEEEeeccCHHHhcCCCcCCCCcchHhHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHcCCCCccCCC
Confidence 98665444444556789999999999987 68999999999999999999999999888876665542221111
Q ss_pred ----------cCC------------CCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhcCcC
Q 003963 726 ----------EIP------------KDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQASRS 773 (783)
Q Consensus 726 ----------~~~------------~~~s~~l~~LI~~cL~~dP~~RPsa~ell~~L~~L~~~~f~~~~~ 773 (783)
.++ +..++...+++.+||+.+|.+|.|+..+ |.|+||+....
T Consensus 247 ~v~~~~~~k~~f~~~~~~~~l~~~~~~~~~~~~dll~~~L~y~p~~R~Sa~~a------l~h~yf~~~~~ 310 (323)
T KOG0594|consen 247 GVSSLPDYKAPFPKWPGPKDLSSILPKLDPDGIELLSKLLQYDPAKRISAKGA------LTHPYFSELPE 310 (323)
T ss_pred CccccccccccCcCCCCccchHHhccccCccHHHHHHHHhccCcccCcCHHHH------hcChhhccccc
Confidence 011 1233578999999999999999999999 78899977644
No 105
>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-
Probab=100.00 E-value=3e-38 Score=354.31 Aligned_cols=264 Identities=28% Similarity=0.477 Sum_probs=217.9
Q ss_pred ccccccccceeEeeeeccCCcEEEEEEEEeCC------ceEEEEEEecccCCHHHHHHHHHHHHHHHhCC-CCceeeEec
Q 003963 498 LDYEILWEDLTIGEQIGQGSCGTVYHAVWYGS------QDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLR-HPNVLLFMG 570 (783)
Q Consensus 498 ~~~e~~~~~y~i~~~LG~G~fG~Vy~a~~~~~------~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~-HpnIv~l~~ 570 (783)
..|+...++|+++++||+|+||.||+|.+... ..||||++.... .....+.+.+|+.+|+.+. |||||++++
T Consensus 30 ~~~~~~~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~-~~~~~~~~~~Ei~~l~~l~~HpnIv~l~~ 108 (400)
T cd05105 30 SRWEFPRDGLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTA-RSSEKQALMSELKIMTHLGPHLNIVNLLG 108 (400)
T ss_pred CceeccccceehhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCCC-ChHHHHHHHHHHHHHHhcCCCCCeeeEEE
Confidence 45667778999999999999999999986431 359999986543 3344567899999999996 999999999
Q ss_pred eeecCCceEEEEEecCCCCHHHHHhhcC----------------------------------------------------
Q 003963 571 AVTSPQRLCIVTEFLPRGSLFRLLQRNT---------------------------------------------------- 598 (783)
Q Consensus 571 ~~~~~~~~~lV~E~~~ggsL~~~L~~~~---------------------------------------------------- 598 (783)
++.....+|||||||++|+|.+++..+.
T Consensus 109 ~~~~~~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (400)
T cd05105 109 ACTKSGPIYIITEYCFYGDLVNYLHKNRDNFLSRHPEKPKKDLDIFGINPADESTRSYVILSFENKGDYMDMKQADTTQY 188 (400)
T ss_pred EEccCCceEEEEEecCCCcHHHHHHHhhhhhhccccccccccccccCCCcccccccchhhhhhccccccccccccccccc
Confidence 9999999999999999999999886421
Q ss_pred -------------------------------------------CcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCC
Q 003963 599 -------------------------------------------TKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSS 635 (783)
Q Consensus 599 -------------------------------------------~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~ 635 (783)
..+++..++.++.||+.||+|||+.+ |+|+||||+
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~--ivH~dikp~ 266 (400)
T cd05105 189 VPMLEIKEASKYSDIQRSNYDRPASYKGSNDSEVKNLLSDDGSEGLTTLDLLSFTYQVARGMEFLASKN--CVHRDLAAR 266 (400)
T ss_pred chhhhhhhhhhhhhcccCcccccccccCcchhhHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCC--eeCCCCChH
Confidence 23677788899999999999999988 999999999
Q ss_pred CEEEcCCCcEEEEecCCCccccccc--ccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCChH
Q 003963 636 NLLVDKHWTVKVGDFGLSRLKHETY--LTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELAT-EKIPWDNLNSM 712 (783)
Q Consensus 636 NILl~~~~~vkL~DFGla~~~~~~~--~~~~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~ellt-G~~Pf~~~~~~ 712 (783)
|||++.++.+||+|||+++...... .......+++.|+|||++.+..++.++|||||||++|+|++ |..||......
T Consensus 267 Nill~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt~g~~P~~~~~~~ 346 (400)
T cd05105 267 NVLLAQGKIVKICDFGLARDIMHDSNYVSKGSTFLPVKWMAPESIFDNLYTTLSDVWSYGILLWEIFSLGGTPYPGMIVD 346 (400)
T ss_pred hEEEeCCCEEEEEeCCcceeccccccccccCCcCCCcceEChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCcccchh
Confidence 9999999999999999987543321 12223356788999999999999999999999999999997 99999876544
Q ss_pred HHHHHhhcccccccCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHH
Q 003963 713 QVIGAVGFMNQRLEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQ 764 (783)
Q Consensus 713 ~~~~~i~~~~~~~~~~~~~s~~l~~LI~~cL~~dP~~RPsa~ell~~L~~L~ 764 (783)
...............+..++..+.++|.+||..+|++||++.+|.+.|+++.
T Consensus 347 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~l~~l~ 398 (400)
T cd05105 347 STFYNKIKSGYRMAKPDHATQEVYDIMVKCWNSEPEKRPSFLHLSDIVESLL 398 (400)
T ss_pred HHHHHHHhcCCCCCCCccCCHHHHHHHHHHCccCHhHCcCHHHHHHHHHHHc
Confidence 3332222233345566788999999999999999999999999999988764
No 106
>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an
Probab=100.00 E-value=1e-38 Score=355.20 Aligned_cols=261 Identities=23% Similarity=0.367 Sum_probs=215.8
Q ss_pred ccccccceeEeeeeccCCcEEEEEEEEeC-CceEEEEEEecccC-CHHHHHHHHHHHHHHHhCCCCceeeEeceeecCCc
Q 003963 500 YEILWEDLTIGEQIGQGSCGTVYHAVWYG-SQDVAVKVFSRQEY-SDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQR 577 (783)
Q Consensus 500 ~e~~~~~y~i~~~LG~G~fG~Vy~a~~~~-~~~vAiK~i~~~~~-~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~ 577 (783)
.++..++|++.+.||+|+||.||++.+.. ++.||+|++.+... .......+.+|+.+++.++||||+++++++..+..
T Consensus 38 ~~~~~~~y~i~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~~ 117 (371)
T cd05622 38 LRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRY 117 (371)
T ss_pred cCcchhhcEEEEEEeecCCeEEEEEEECCCCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCE
Confidence 34556899999999999999999999865 46799999875432 22334567889999999999999999999999999
Q ss_pred eEEEEEecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCcccc
Q 003963 578 LCIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKH 657 (783)
Q Consensus 578 ~~lV~E~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~ 657 (783)
+|+|||||++|+|.+++... .+++..+..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||++....
T Consensus 118 ~~lv~Ey~~gg~L~~~~~~~--~~~~~~~~~~~~qi~~aL~~LH~~~--ivHrDLkp~NIll~~~~~ikL~DfG~a~~~~ 193 (371)
T cd05622 118 LYMVMEYMPGGDLVNLMSNY--DVPEKWARFYTAEVVLALDAIHSMG--FIHRDVKPDNMLLDKSGHLKLADFGTCMKMN 193 (371)
T ss_pred EEEEEcCCCCCcHHHHHHhc--CCCHHHHHHHHHHHHHHHHHHHHCC--EEeCCCCHHHEEECCCCCEEEEeCCceeEcC
Confidence 99999999999999999754 4788889999999999999999998 9999999999999999999999999987654
Q ss_pred ccc-ccccCCCCCCcccCcccccCCC----CCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhcccccccCC--CC
Q 003963 658 ETY-LTTKTGKGTPQWMAPEVLRNEP----SDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLEIP--KD 730 (783)
Q Consensus 658 ~~~-~~~~~~~Gt~~Y~aPE~~~~~~----~s~~sDIwSLG~il~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~~--~~ 730 (783)
... ......+||+.|+|||++.+.. ++.++|||||||++|+|++|.+||...+.......+........+| ..
T Consensus 194 ~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~ 273 (371)
T cd05622 194 KEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNSLTFPDDND 273 (371)
T ss_pred cCCcccccCcccCccccCHHHHhccCCCccCCCccceeehhHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCcccCCCcCC
Confidence 322 1233567999999999987643 6889999999999999999999999888776666664433333333 46
Q ss_pred CCHHHHHHHHHhhhhCCCC--CCCHHHHHHHHHHHHHHHhhc
Q 003963 731 VDPRWAAIVESCWHSDPQC--RPSFQELVDKLRDLQRQYFQA 770 (783)
Q Consensus 731 ~s~~l~~LI~~cL~~dP~~--RPsa~ell~~L~~L~~~~f~~ 770 (783)
++..+++||..||...+.+ |+++.++ ++|+||+.
T Consensus 274 ~s~~~~~li~~~L~~~~~r~~r~~~~ei------~~h~~~~~ 309 (371)
T cd05622 274 ISKEAKNLICAFLTDREVRLGRNGVEEI------KRHLFFKN 309 (371)
T ss_pred CCHHHHHHHHHHcCChhhhcCCCCHHHH------hcCcccCC
Confidence 8999999999999844433 7899999 56777755
No 107
>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment
Probab=100.00 E-value=4.5e-38 Score=332.45 Aligned_cols=256 Identities=34% Similarity=0.558 Sum_probs=219.1
Q ss_pred ccceeEeeeeccCCcEEEEEEEEeC----CceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEeceeecCCceE
Q 003963 504 WEDLTIGEQIGQGSCGTVYHAVWYG----SQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLC 579 (783)
Q Consensus 504 ~~~y~i~~~LG~G~fG~Vy~a~~~~----~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~ 579 (783)
.++|++.+.||+|+||.||+|.+.. ...||||++.... .......+.+|+.+++.++||||+++++++...+..+
T Consensus 3 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 81 (266)
T cd05033 3 PSYVTIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGS-SDKQRLDFLTEASIMGQFDHPNIIRLEGVVTKSRPVM 81 (266)
T ss_pred hHHceeeeEecCCccceEEEEEEccCCCCcceEEEEEcCCCC-ChHHHHHHHHHHHHHHhCCCCCcceEeEEEecCCceE
Confidence 4679999999999999999998753 2468999886543 3445567889999999999999999999999999999
Q ss_pred EEEEecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCccccc-
Q 003963 580 IVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHE- 658 (783)
Q Consensus 580 lV~E~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~~- 658 (783)
++|||+++++|.+++......+++..++.++.|++.||+|||+++ |+|+||||+|||++.++.++|+|||++.....
T Consensus 82 iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~~--i~H~di~p~nili~~~~~~~l~dfg~~~~~~~~ 159 (266)
T cd05033 82 IITEYMENGSLDKFLRENDGKFTVGQLVGMLRGIASGMKYLSEMN--YVHRDLAARNILVNSNLVCKVSDFGLSRRLEDS 159 (266)
T ss_pred EEEEcCCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCC--cccCCCCcceEEEcCCCCEEECccchhhccccc
Confidence 999999999999999876667899999999999999999999988 99999999999999999999999999987642
Q ss_pred -ccccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCChHHHHHHhhcccccccCCCCCCHHHH
Q 003963 659 -TYLTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELAT-EKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWA 736 (783)
Q Consensus 659 -~~~~~~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~l~ 736 (783)
.........++..|+|||.+.+..++.++|||||||++|+|++ |..||......+....+.. ....+.+..++..+.
T Consensus 160 ~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Dv~slG~~l~~l~~~g~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~ 238 (266)
T cd05033 160 EATYTTKGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSYGERPYWDMSNQDVIKAVED-GYRLPPPMDCPSALY 238 (266)
T ss_pred ccceeccCCCCCccccChhhhccCCCccccchHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHc-CCCCCCCCCCCHHHH
Confidence 1112223345678999999999889999999999999999998 9999988877766655532 223455667899999
Q ss_pred HHHHHhhhhCCCCCCCHHHHHHHHHHH
Q 003963 737 AIVESCWHSDPQCRPSFQELVDKLRDL 763 (783)
Q Consensus 737 ~LI~~cL~~dP~~RPsa~ell~~L~~L 763 (783)
+|+.+||+.+|.+||++.++++.|+++
T Consensus 239 ~li~~cl~~~p~~Rp~~~ei~~~l~~~ 265 (266)
T cd05033 239 QLMLDCWQKDRNERPTFSQIVSTLDKM 265 (266)
T ss_pred HHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 999999999999999999999999875
No 108
>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o
Probab=100.00 E-value=6.4e-39 Score=350.97 Aligned_cols=251 Identities=27% Similarity=0.436 Sum_probs=207.9
Q ss_pred eeeccCCcEEEEEEEEeC-CceEEEEEEecccCC-HHHHHHHHHHHHHHHhC-CCCceeeEeceeecCCceEEEEEecCC
Q 003963 511 EQIGQGSCGTVYHAVWYG-SQDVAVKVFSRQEYS-DEVIHSFRQEVSLMKRL-RHPNVLLFMGAVTSPQRLCIVTEFLPR 587 (783)
Q Consensus 511 ~~LG~G~fG~Vy~a~~~~-~~~vAiK~i~~~~~~-~~~~~~~~~Ei~il~~l-~HpnIv~l~~~~~~~~~~~lV~E~~~g 587 (783)
+.||+|+||.||++.+.. ++.||+|++.+.... ......+.+|+.++..+ +||||+++++++...+.+|+||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~~~~ 80 (329)
T cd05618 1 RVIGRGSYAKVLLVRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNG 80 (329)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcCCCCcCCceeeEEEeCCEEEEEEeCCCC
Confidence 469999999999999865 467999999875432 34456678899888877 799999999999999999999999999
Q ss_pred CCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCcccccccccccCCC
Q 003963 588 GSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETYLTTKTGK 667 (783)
Q Consensus 588 gsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~~ 667 (783)
++|..++... ..+++..++.++.||+.||.|||+++ |+||||||+||||+.++.+||+|||+++.............
T Consensus 81 ~~L~~~~~~~-~~l~~~~~~~i~~qi~~~l~~lH~~~--ivH~Dikp~Nili~~~~~~kL~DfG~~~~~~~~~~~~~~~~ 157 (329)
T cd05618 81 GDLMFHMQRQ-RKLPEEHARFYSAEISLALNYLHERG--IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSTFC 157 (329)
T ss_pred CCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCC--eeeCCCCHHHEEECCCCCEEEeeCCccccccCCCCcccccc
Confidence 9999888654 46899999999999999999999998 99999999999999999999999999875433333334567
Q ss_pred CCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCC--------hHHHHHHhhcccccccCCCCCCHHHHHHH
Q 003963 668 GTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLN--------SMQVIGAVGFMNQRLEIPKDVDPRWAAIV 739 (783)
Q Consensus 668 Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~elltG~~Pf~~~~--------~~~~~~~i~~~~~~~~~~~~~s~~l~~LI 739 (783)
||+.|+|||++.+..++.++|||||||++|+|++|..||.... ........ .......+|..++..+.+||
T Consensus 158 gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~-i~~~~~~~p~~~~~~~~~ll 236 (329)
T cd05618 158 GTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQV-ILEKQIRIPRSLSVKAASVL 236 (329)
T ss_pred CCccccCHHHHcCCCCCCccceecccHHHHHHhhCCCCCccCCCcCCcccccHHHHHHH-HhcCCCCCCCCCCHHHHHHH
Confidence 8999999999999999999999999999999999999995321 11111111 13345567888999999999
Q ss_pred HHhhhhCCCCCCCH------HHHHHHHHHHHHHHhhcC
Q 003963 740 ESCWHSDPQCRPSF------QELVDKLRDLQRQYFQAS 771 (783)
Q Consensus 740 ~~cL~~dP~~RPsa------~ell~~L~~L~~~~f~~~ 771 (783)
.+||..||.+||++ .++ +.|+||+..
T Consensus 237 ~~~L~~dP~~R~~~~~~~~~~~i------~~hp~f~~~ 268 (329)
T cd05618 237 KSFLNKDPKERLGCHPQTGFADI------QGHPFFRNV 268 (329)
T ss_pred HHHhcCCHHHcCCCCCCCCHHHH------hcCCCCCCC
Confidence 99999999999984 566 678888653
No 109
>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta
Probab=100.00 E-value=3.5e-38 Score=337.87 Aligned_cols=268 Identities=33% Similarity=0.536 Sum_probs=222.8
Q ss_pred ccccccceeEeeeeccCCcEEEEEEEEeC------CceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEeceee
Q 003963 500 YEILWEDLTIGEQIGQGSCGTVYHAVWYG------SQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVT 573 (783)
Q Consensus 500 ~e~~~~~y~i~~~LG~G~fG~Vy~a~~~~------~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~ 573 (783)
|++..++|++.++||+|+||.||+|.++. ...||+|.+.... .......+.+|+.+++.++||||+++++++.
T Consensus 1 ~~~~~~~~~i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~ 79 (288)
T cd05061 1 WEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESA-SLRERIEFLNEASVMKGFTCHHVVRLLGVVS 79 (288)
T ss_pred CcccHHHceeeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcC-CHHHHHHHHHHHHHHHhCCCCCeeeEEEEEc
Confidence 45667899999999999999999997642 2469999876543 2333456788999999999999999999999
Q ss_pred cCCceEEEEEecCCCCHHHHHhhcC---------CcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCc
Q 003963 574 SPQRLCIVTEFLPRGSLFRLLQRNT---------TKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWT 644 (783)
Q Consensus 574 ~~~~~~lV~E~~~ggsL~~~L~~~~---------~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~ 644 (783)
.....|+||||+++|+|.+++.... ..+....++.++.||+.||.|||+++ |+||||||+|||++.++.
T Consensus 80 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~--i~H~dikp~nili~~~~~ 157 (288)
T cd05061 80 KGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKK--FVHRDLAARNCMVAHDFT 157 (288)
T ss_pred CCCCcEEEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCC--CcCCCCChheEEEcCCCc
Confidence 9999999999999999999996522 23456778899999999999999998 999999999999999999
Q ss_pred EEEEecCCCcccccccc--cccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCChHHHHHHhhcc
Q 003963 645 VKVGDFGLSRLKHETYL--TTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELAT-EKIPWDNLNSMQVIGAVGFM 721 (783)
Q Consensus 645 vkL~DFGla~~~~~~~~--~~~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~ellt-G~~Pf~~~~~~~~~~~i~~~ 721 (783)
++|+|||+++....... ......++..|+|||.+.+..++.++|||||||++|+|++ |..||......+....+. .
T Consensus 158 ~~L~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~DvwslG~~l~el~~~~~~p~~~~~~~~~~~~~~-~ 236 (288)
T cd05061 158 VKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVM-D 236 (288)
T ss_pred EEECcCCccccccccccccccCCCcccccccCHHHhccCCCChHhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHH-c
Confidence 99999999875433221 1122345778999999999889999999999999999998 799998877766555442 2
Q ss_pred cccccCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhcC
Q 003963 722 NQRLEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQAS 771 (783)
Q Consensus 722 ~~~~~~~~~~s~~l~~LI~~cL~~dP~~RPsa~ell~~L~~L~~~~f~~~ 771 (783)
......+..+++.+.++|.+||+.+|.+||++.++++.|++..+++|+..
T Consensus 237 ~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~~~~~~~~~~ 286 (288)
T cd05061 237 GGYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDLHPSFPEV 286 (288)
T ss_pred CCCCCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHhhcCCCCCCC
Confidence 23445566788999999999999999999999999999999999988754
No 110
>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t
Probab=100.00 E-value=4e-38 Score=331.50 Aligned_cols=255 Identities=31% Similarity=0.509 Sum_probs=217.2
Q ss_pred cceeEeeeeccCCcEEEEEEEEeC-CceEEEEEEecccCCH---HHHHHHHHHHHHHHhCCCCceeeEeceeecCCceEE
Q 003963 505 EDLTIGEQIGQGSCGTVYHAVWYG-SQDVAVKVFSRQEYSD---EVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCI 580 (783)
Q Consensus 505 ~~y~i~~~LG~G~fG~Vy~a~~~~-~~~vAiK~i~~~~~~~---~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~l 580 (783)
++|++.+.||+|+||.||++.+.. +++|++|++....... .....+.+|+.+++.++||||+++++++.....+++
T Consensus 2 ~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~ 81 (263)
T cd06625 2 TNWRRGKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERIVQYYGCLRDDETLSI 81 (263)
T ss_pred CcccccceecCCCceEEEEEEEcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEccCCeEEE
Confidence 468999999999999999998754 5789999987554322 234678899999999999999999999999999999
Q ss_pred EEEecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCccccccc
Q 003963 581 VTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETY 660 (783)
Q Consensus 581 V~E~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~ 660 (783)
||||+++++|.+++... ..+++..+..++.|++.||.|||+.+ |+|+||||+||+++.++.++|+|||++.......
T Consensus 82 v~e~~~~~~l~~~~~~~-~~~~~~~~~~~~~~l~~~l~~lH~~~--i~H~dl~p~nilv~~~~~~~l~dfg~~~~~~~~~ 158 (263)
T cd06625 82 FMEYMPGGSVKDQLKAY-GALTETVTRKYTRQILEGVEYLHSNM--IVHRDIKGANILRDSAGNVKLGDFGASKRLQTIC 158 (263)
T ss_pred EEEECCCCcHHHHHHHh-CCCCHHHHHHHHHHHHHHHHHHHhCC--eecCCCCHHHEEEcCCCCEEEeecccceeccccc
Confidence 99999999999999764 35888999999999999999999998 9999999999999999999999999987543321
Q ss_pred ccc---cCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhcccccccCCCCCCHHHHH
Q 003963 661 LTT---KTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAA 737 (783)
Q Consensus 661 ~~~---~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~l~~ 737 (783)
... ....|+..|+|||++.+..++.++|||||||++|+|++|+.||...+................++..++..+.+
T Consensus 159 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (263)
T cd06625 159 SSGTGMKSVTGTPYWMSPEVISGEGYGRKADVWSVGCTVVEMLTEKPPWAEFEAMAAIFKIATQPTNPQLPSHVSPDARN 238 (263)
T ss_pred cccccccCCCcCccccCcceeccCCCCchhhhHHHHHHHHHHHhCCCCccccchHHHHHHHhccCCCCCCCccCCHHHHH
Confidence 111 23457889999999999989999999999999999999999998776665555554444556677889999999
Q ss_pred HHHHhhhhCCCCCCCHHHHHHHHHHHHHHHh
Q 003963 738 IVESCWHSDPQCRPSFQELVDKLRDLQRQYF 768 (783)
Q Consensus 738 LI~~cL~~dP~~RPsa~ell~~L~~L~~~~f 768 (783)
+|.+||..+|.+||++.++ ++++||
T Consensus 239 li~~~l~~~p~~Rpt~~~l------l~~~~~ 263 (263)
T cd06625 239 FLRRTFVENAKKRPSAEEL------LRHFFV 263 (263)
T ss_pred HHHHHhhcCcccCCCHHHH------hhCCCC
Confidence 9999999999999999999 455654
No 111
>PTZ00267 NIMA-related protein kinase; Provisional
Probab=100.00 E-value=3.9e-38 Score=361.92 Aligned_cols=249 Identities=22% Similarity=0.355 Sum_probs=212.3
Q ss_pred cceeEeeeeccCCcEEEEEEEEeC--CceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEeceeecCCceEEEE
Q 003963 505 EDLTIGEQIGQGSCGTVYHAVWYG--SQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIVT 582 (783)
Q Consensus 505 ~~y~i~~~LG~G~fG~Vy~a~~~~--~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lV~ 582 (783)
..|.+.+.||+|+||.||+|.... ++.||+|++... .......+.+|+.+|+.++|||||++++++..++.+||||
T Consensus 67 ~~y~~~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~--~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~lv~ 144 (478)
T PTZ00267 67 HMYVLTTLVGRNPTTAAFVATRGSDPKEKVVAKFVMLN--DERQAAYARSELHCLAACDHFGIVKHFDDFKSDDKLLLIM 144 (478)
T ss_pred eeEEEEEEEEeCCCcEEEEEEEcCCCCeEEEEEEcccC--CHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEECCEEEEEE
Confidence 459999999999999999998754 356888876433 2344456788999999999999999999999999999999
Q ss_pred EecCCCCHHHHHhh---cCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCcccccc
Q 003963 583 EFLPRGSLFRLLQR---NTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHET 659 (783)
Q Consensus 583 E~~~ggsL~~~L~~---~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~~~ 659 (783)
||+++|+|.+++.. ...++++..+..++.||+.||.|||+++ |+||||||+||||+.++.+||+|||+++.....
T Consensus 145 E~~~gg~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~--ivHrDlkp~NIll~~~~~~kL~DFgla~~~~~~ 222 (478)
T PTZ00267 145 EYGSGGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEVHSRK--MMHRDLKSANIFLMPTGIIKLGDFGFSKQYSDS 222 (478)
T ss_pred ECCCCCCHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCC--EEECCcCHHhEEECCCCcEEEEeCcCceecCCc
Confidence 99999999998853 2345889999999999999999999998 999999999999999999999999999865433
Q ss_pred cc--cccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhcccccccCCCCCCHHHHH
Q 003963 660 YL--TTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAA 737 (783)
Q Consensus 660 ~~--~~~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~l~~ 737 (783)
.. .....+||+.|+|||++.+..++.++|||||||++|+|++|+.||...+.......+... ....++..+++++.+
T Consensus 223 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~Pf~~~~~~~~~~~~~~~-~~~~~~~~~s~~~~~ 301 (478)
T PTZ00267 223 VSLDVASSFCGTPYYLAPELWERKRYSKKADMWSLGVILYELLTLHRPFKGPSQREIMQQVLYG-KYDPFPCPVSSGMKA 301 (478)
T ss_pred cccccccccCCCccccCHhHhCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhC-CCCCCCccCCHHHHH
Confidence 21 233457999999999999999999999999999999999999999888776666555322 233456778999999
Q ss_pred HHHHhhhhCCCCCCCHHHHHH
Q 003963 738 IVESCWHSDPQCRPSFQELVD 758 (783)
Q Consensus 738 LI~~cL~~dP~~RPsa~ell~ 758 (783)
||.+||.+||.+||++.+++.
T Consensus 302 li~~~L~~dP~~Rps~~~~l~ 322 (478)
T PTZ00267 302 LLDPLLSKNPALRPTTQQLLH 322 (478)
T ss_pred HHHHHhccChhhCcCHHHHHh
Confidence 999999999999999999964
No 112
>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase
Probab=100.00 E-value=5.4e-38 Score=331.55 Aligned_cols=258 Identities=24% Similarity=0.411 Sum_probs=215.3
Q ss_pred cceeEeeeeccCCcEEEEEEEEe-CCceEEEEEEeccc-CCHHHHHHHHHHHHHHHhCCCCceeeEeceeecCCceEEEE
Q 003963 505 EDLTIGEQIGQGSCGTVYHAVWY-GSQDVAVKVFSRQE-YSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIVT 582 (783)
Q Consensus 505 ~~y~i~~~LG~G~fG~Vy~a~~~-~~~~vAiK~i~~~~-~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lV~ 582 (783)
++|++.++||+|+||.||+|.+. .++.||||++.... ........+.+|+.+++.++||||+++++++...+..+++|
T Consensus 2 ~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 81 (267)
T cd08228 2 ANFQIEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLNHPNVIKYLDSFIEDNELNIVL 81 (267)
T ss_pred cceeeeeeeccCCCeeEEEEEEeCCCCEEEEEEeeccccCCHHHHHHHHHHHHHHHhCCCcceeeeeeeEEECCeEEEEE
Confidence 58999999999999999999976 45789999886533 33455667889999999999999999999999999999999
Q ss_pred EecCCCCHHHHHhh---cCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCcccccc
Q 003963 583 EFLPRGSLFRLLQR---NTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHET 659 (783)
Q Consensus 583 E~~~ggsL~~~L~~---~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~~~ 659 (783)
||+++++|.+++.. ....+++..++.++.||+.||.|||+++ |+|+||||+|||++.++.++|+|||++......
T Consensus 82 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~--i~H~dl~~~nil~~~~~~~~l~d~g~~~~~~~~ 159 (267)
T cd08228 82 ELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMHSRR--VMHRDIKPANVFITATGVVKLGDLGLGRFFSSK 159 (267)
T ss_pred EecCCCcHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHhhCC--eeCCCCCHHHEEEcCCCCEEECccccceeccch
Confidence 99999999988853 2345788999999999999999999998 999999999999999999999999998766543
Q ss_pred cccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCCh--HHHHHHhhcccccccCCCCCCHHHHH
Q 003963 660 YLTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNS--MQVIGAVGFMNQRLEIPKDVDPRWAA 737 (783)
Q Consensus 660 ~~~~~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~elltG~~Pf~~~~~--~~~~~~i~~~~~~~~~~~~~s~~l~~ 737 (783)
........|++.|+|||.+.+..++.++|+||||+++|+|++|..||..... ......+.........+..++..+.+
T Consensus 160 ~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (267)
T cd08228 160 TTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLFSLCQKIEQCDYPPLPTEHYSEKLRE 239 (267)
T ss_pred hHHHhcCCCCccccChhhhccCCCCchhhHHHHHHHHHHHhcCCCCCccccccHHHHHHHHhcCCCCCCChhhcCHHHHH
Confidence 3333345688999999999988899999999999999999999999965432 33333332222222223457789999
Q ss_pred HHHHhhhhCCCCCCCHHHHHHHHHHHH
Q 003963 738 IVESCWHSDPQCRPSFQELVDKLRDLQ 764 (783)
Q Consensus 738 LI~~cL~~dP~~RPsa~ell~~L~~L~ 764 (783)
+|.+||..+|.+||++.++++.|+.++
T Consensus 240 li~~cl~~~p~~Rp~~~~vl~~~~~~~ 266 (267)
T cd08228 240 LVSMCIYPDPDQRPDIGYVHQIAKQMH 266 (267)
T ss_pred HHHHHCCCCcccCcCHHHHHHHHHHhc
Confidence 999999999999999999999988764
No 113
>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor
Probab=100.00 E-value=4.9e-38 Score=341.61 Aligned_cols=259 Identities=27% Similarity=0.506 Sum_probs=217.2
Q ss_pred ccceeEeeeeccCCcEEEEEEEEeCC-c----eEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEeceeecCCce
Q 003963 504 WEDLTIGEQIGQGSCGTVYHAVWYGS-Q----DVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRL 578 (783)
Q Consensus 504 ~~~y~i~~~LG~G~fG~Vy~a~~~~~-~----~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~ 578 (783)
..+|++.+.||+|+||.||+|.+... . .||+|++.... .....+.+.+|+.+++.++||||+++++++... ..
T Consensus 6 ~~~f~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~g~~~~~-~~ 83 (316)
T cd05108 6 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT-SPKANKEILDEAYVMASVDNPHVCRLLGICLTS-TV 83 (316)
T ss_pred hhhceeeeeeecCCCceEEEEEEecCCCccceeEEEEeccccC-CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEcCC-Cc
Confidence 46899999999999999999987533 2 38999986432 344556788999999999999999999998764 57
Q ss_pred EEEEEecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCccccc
Q 003963 579 CIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHE 658 (783)
Q Consensus 579 ~lV~E~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~~ 658 (783)
++++||+++|+|.+++......+++..++.++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+++....
T Consensus 84 ~~v~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~--iiH~dlkp~Nill~~~~~~kl~DfG~a~~~~~ 161 (316)
T cd05108 84 QLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEERR--LVHRDLAARNVLVKTPQHVKITDFGLAKLLGA 161 (316)
T ss_pred eeeeecCCCCCHHHHHHhccccCCHHHHHHHHHHHHHHHHHHHhcC--eeccccchhheEecCCCcEEEccccccccccC
Confidence 8999999999999999877667889999999999999999999998 99999999999999999999999999986543
Q ss_pred cccc--ccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCChHHHHHHhhcccccccCCCCCCHHH
Q 003963 659 TYLT--TKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELAT-EKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRW 735 (783)
Q Consensus 659 ~~~~--~~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~l 735 (783)
.... .....++..|++||.+.+..++.++|||||||++|||++ |..||.+....+....+. .......+..++.++
T Consensus 162 ~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slGv~l~el~t~g~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 240 (316)
T cd05108 162 DEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILE-KGERLPQPPICTIDV 240 (316)
T ss_pred CCcceeccCCccceeecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHh-CCCCCCCCCCCCHHH
Confidence 2211 122334678999999999999999999999999999998 999998877665543332 333455567788999
Q ss_pred HHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHH
Q 003963 736 AAIVESCWHSDPQCRPSFQELVDKLRDLQRQY 767 (783)
Q Consensus 736 ~~LI~~cL~~dP~~RPsa~ell~~L~~L~~~~ 767 (783)
.++|.+||..+|.+||++.+++..|.++....
T Consensus 241 ~~li~~cl~~~p~~Rps~~~l~~~l~~~~~~~ 272 (316)
T cd05108 241 YMIMVKCWMIDADSRPKFRELIIEFSKMARDP 272 (316)
T ss_pred HHHHHHHccCChhhCcCHHHHHHHHHHHHcCC
Confidence 99999999999999999999999988876543
No 114
>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome. Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds
Probab=100.00 E-value=5e-38 Score=330.83 Aligned_cols=251 Identities=33% Similarity=0.595 Sum_probs=214.7
Q ss_pred ccceeEeeeeccCCcEEEEEEEEeCCceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEeceeecCCceEEEEE
Q 003963 504 WEDLTIGEQIGQGSCGTVYHAVWYGSQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIVTE 583 (783)
Q Consensus 504 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lV~E 583 (783)
.++|++.+.||+|+||.||++.+.+...||+|.+....... ..+.+|+.+++.++||||+++++++.....++++||
T Consensus 3 ~~~~~~~~~lg~G~~~~vy~~~~~~~~~~aik~~~~~~~~~---~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 79 (256)
T cd05113 3 PKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSE---DEFIEEAKVMMKLSHEKLVQLYGVCTKQRPIYIVTE 79 (256)
T ss_pred hHHeEEeeEecCcccceEEEEEecCCCcEEEEEcCCCcccH---HHHHHHHHHHhcCCCCCeeeEEEEEccCCCcEEEEE
Confidence 36799999999999999999988777679999987554432 467889999999999999999999999899999999
Q ss_pred ecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCcccccccc-c
Q 003963 584 FLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETYL-T 662 (783)
Q Consensus 584 ~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~~-~ 662 (783)
|+.+++|.+++......+++..++.++.||+.||+|||+.+ |+|+||||.|||++.++.+||+|||+++....... .
T Consensus 80 ~~~~~~l~~~i~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~--i~H~dl~p~nili~~~~~~kl~d~g~~~~~~~~~~~~ 157 (256)
T cd05113 80 YMSNGCLLNYLREHGKRFQPSQLLEMCKDVCEGMAYLESKQ--FIHRDLAARNCLVDDQGCVKVSDFGLSRYVLDDEYTS 157 (256)
T ss_pred cCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCC--eeccccCcceEEEcCCCCEEECCCccceecCCCceee
Confidence 99999999999876557899999999999999999999998 99999999999999999999999999875543321 1
Q ss_pred ccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCChHHHHHHhhcccccccCCCCCCHHHHHHHHH
Q 003963 663 TKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELAT-EKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAAIVES 741 (783)
Q Consensus 663 ~~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~l~~LI~~ 741 (783)
.....++..|++||.+.+..++.++|||||||++|+|++ |..||...+.......+.. ......+...+..+.+++.+
T Consensus 158 ~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~li~~ 236 (256)
T cd05113 158 SVGSKFPVRWSPPEVLLYSKFSSKSDVWAFGVLMWEVYSLGKMPYERFNNSETVEKVSQ-GLRLYRPHLASEKVYAIMYS 236 (256)
T ss_pred cCCCccChhhCCHHHHhcCcccchhHHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHHhc-CCCCCCCCCCCHHHHHHHHH
Confidence 112235678999999998889999999999999999998 9999988877666555532 23344566678999999999
Q ss_pred hhhhCCCCCCCHHHHHHHH
Q 003963 742 CWHSDPQCRPSFQELVDKL 760 (783)
Q Consensus 742 cL~~dP~~RPsa~ell~~L 760 (783)
||..+|.+||++.+|+..|
T Consensus 237 cl~~~p~~Rp~~~~ll~~~ 255 (256)
T cd05113 237 CWHEKAEERPTFQQLLSSI 255 (256)
T ss_pred HcCCCcccCCCHHHHHHhh
Confidence 9999999999999998765
No 115
>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,
Probab=100.00 E-value=1.7e-38 Score=339.99 Aligned_cols=256 Identities=22% Similarity=0.312 Sum_probs=213.0
Q ss_pred ceeEeeeeccCCcEEEEEEEEeC-CceEEEEEEecccCCH-HHHHHHHHHHHHHHhCCCCceeeEeceeecCCceEEEEE
Q 003963 506 DLTIGEQIGQGSCGTVYHAVWYG-SQDVAVKVFSRQEYSD-EVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIVTE 583 (783)
Q Consensus 506 ~y~i~~~LG~G~fG~Vy~a~~~~-~~~vAiK~i~~~~~~~-~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lV~E 583 (783)
.|++.++||+|+||.||++.+.. ++.||+|++....... .....+.+|+.+++.++||||+++++++..++.+|+|||
T Consensus 1 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 80 (285)
T cd05605 1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLT 80 (285)
T ss_pred CceEEEEEecCCCeEEEEEEEcCCCceEEEEEEehhhhhhhhhHHHHHHHHHHHHhcCCCCEeeeeeeecCCCeEEEEEe
Confidence 48899999999999999999754 5789999987654332 233457789999999999999999999999999999999
Q ss_pred ecCCCCHHHHHhhc-CCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCccccccccc
Q 003963 584 FLPRGSLFRLLQRN-TTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETYLT 662 (783)
Q Consensus 584 ~~~ggsL~~~L~~~-~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~~~ 662 (783)
|+++++|.+++... ...+++..+..++.|++.||.|||+.+ |+|+||||+||++++++.++|+|||++....... .
T Consensus 81 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~--ivH~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~-~ 157 (285)
T cd05605 81 LMNGGDLKFHIYNMGNPGFDEERAVFYAAEITCGLEDLHRER--IVYRDLKPENILLDDYGHIRISDLGLAVEIPEGE-T 157 (285)
T ss_pred ccCCCcHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHHCC--cEecCCCHHHEEECCCCCEEEeeCCCceecCCCC-c
Confidence 99999999888653 346899999999999999999999998 9999999999999999999999999987654322 2
Q ss_pred ccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhc--ccccccCCCCCCHHHHHHHH
Q 003963 663 TKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGF--MNQRLEIPKDVDPRWAAIVE 740 (783)
Q Consensus 663 ~~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~elltG~~Pf~~~~~~~~~~~i~~--~~~~~~~~~~~s~~l~~LI~ 740 (783)
.....|++.|+|||++.+..++.++|||||||++|+|++|..||...........+.. ......++..+++.+.+||.
T Consensus 158 ~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~ 237 (285)
T cd05605 158 IRGRVGTVGYMAPEVVKNERYTFSPDWWGLGCLIYEMIEGKSPFRQRKEKVKREEVERRVKEDQEEYSEKFSEAARSICR 237 (285)
T ss_pred cccccCCCCccCcHHhcCCCCCccccchhHHHHHHHHHHCCCCCCCCchhhHHHHHHHHhhhcccccCcccCHHHHHHHH
Confidence 2345789999999999998899999999999999999999999987655332222211 12234456678999999999
Q ss_pred HhhhhCCCCCC-----CHHHHHHHHHHHHHHHhhc
Q 003963 741 SCWHSDPQCRP-----SFQELVDKLRDLQRQYFQA 770 (783)
Q Consensus 741 ~cL~~dP~~RP-----sa~ell~~L~~L~~~~f~~ 770 (783)
+||..||.+|| ++.++ ++|+||..
T Consensus 238 ~~l~~~P~~R~~~~~~~~~~l------~~~~~~~~ 266 (285)
T cd05605 238 QLLTKDPGFRLGCRGEGAEEV------KAHPFFRT 266 (285)
T ss_pred HHccCCHHHhcCCCCCCHHHH------hcCcCccC
Confidence 99999999999 88898 56777743
No 116
>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk. Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr
Probab=100.00 E-value=4.4e-38 Score=331.43 Aligned_cols=256 Identities=32% Similarity=0.586 Sum_probs=218.2
Q ss_pred ccccccceeEeeeeccCCcEEEEEEEEeCCceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEeceeecCCceE
Q 003963 500 YEILWEDLTIGEQIGQGSCGTVYHAVWYGSQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLC 579 (783)
Q Consensus 500 ~e~~~~~y~i~~~LG~G~fG~Vy~a~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~ 579 (783)
|++..++|++.++||+|+||.||+|....++.||+|.+....... ..+.+|+.+++.++|+||+++++++. .+.++
T Consensus 1 ~~~~~~~~~~~~~ig~G~~g~v~~~~~~~~~~~a~K~~~~~~~~~---~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~ 76 (260)
T cd05067 1 WEVPRETLKLVKKLGAGQFGEVWMGYYNGHTKVAIKSLKQGSMSP---EAFLAEANLMKQLQHPRLVRLYAVVT-QEPIY 76 (260)
T ss_pred CccchHHceeeeeeccCccceEEeeecCCCceEEEEEecCCCCcH---HHHHHHHHHHHhcCCcCeeeEEEEEc-cCCcE
Confidence 466778999999999999999999998888899999987655433 46788999999999999999999874 56789
Q ss_pred EEEEecCCCCHHHHHhhc-CCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCccccc
Q 003963 580 IVTEFLPRGSLFRLLQRN-TTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHE 658 (783)
Q Consensus 580 lV~E~~~ggsL~~~L~~~-~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~~ 658 (783)
++|||+.+++|.+++... ...+++..+..++.|++.||+|||+++ ++|+||||+||+++.++.++|+|||++.....
T Consensus 77 ~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~--i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~ 154 (260)
T cd05067 77 IITEYMENGSLVDFLKTPEGIKLTINKLIDMAAQIAEGMAFIERKN--YIHRDLRAANILVSETLCCKIADFGLARLIED 154 (260)
T ss_pred EEEEcCCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHhcCC--eecccccHHhEEEcCCCCEEEccCcceeecCC
Confidence 999999999999998653 346889999999999999999999998 99999999999999999999999999876552
Q ss_pred cc-ccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCChHHHHHHhhcccccccCCCCCCHHHH
Q 003963 659 TY-LTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELAT-EKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWA 736 (783)
Q Consensus 659 ~~-~~~~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~l~ 736 (783)
.. .......++..|+|||++.+..++.++|||||||++|+|++ |++||...+..+....+.. ......+..++.++.
T Consensus 155 ~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 233 (260)
T cd05067 155 NEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTYGRIPYPGMTNPEVIQNLER-GYRMPRPDNCPEELY 233 (260)
T ss_pred CCcccccCCcccccccCHHHhccCCcCcccchHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHc-CCCCCCCCCCCHHHH
Confidence 22 11223345678999999998889999999999999999999 9999988877666555432 234456677889999
Q ss_pred HHHHHhhhhCCCCCCCHHHHHHHHHH
Q 003963 737 AIVESCWHSDPQCRPSFQELVDKLRD 762 (783)
Q Consensus 737 ~LI~~cL~~dP~~RPsa~ell~~L~~ 762 (783)
++|.+||..+|++||++++++..|+.
T Consensus 234 ~li~~~l~~~p~~Rp~~~~l~~~l~~ 259 (260)
T cd05067 234 ELMRLCWKEKPEERPTFEYLRSVLED 259 (260)
T ss_pred HHHHHHccCChhhCCCHHHHHHHhhc
Confidence 99999999999999999999998865
No 117
>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase. Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays
Probab=100.00 E-value=7.4e-38 Score=330.48 Aligned_cols=258 Identities=34% Similarity=0.607 Sum_probs=218.8
Q ss_pred ccccccceeEeeeeccCCcEEEEEEEEeC-CceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEeceeecCCce
Q 003963 500 YEILWEDLTIGEQIGQGSCGTVYHAVWYG-SQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRL 578 (783)
Q Consensus 500 ~e~~~~~y~i~~~LG~G~fG~Vy~a~~~~-~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~ 578 (783)
|++...+|.+.++||+|+||.||+|.+.. ++.|++|++.... .....+.+|+.+++.++||||+++++++.....+
T Consensus 1 ~~~~~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~~---~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~ 77 (263)
T cd05052 1 WEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT---MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPF 77 (263)
T ss_pred CCCchHHeEEeeecCCcccceEEEEEEecCCceEEEEEecCCc---hHHHHHHHHHHHHHhCCCCChhheEEEEcCCCCc
Confidence 35566789999999999999999999765 5679999986543 2245688899999999999999999999999999
Q ss_pred EEEEEecCCCCHHHHHhhc-CCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCcccc
Q 003963 579 CIVTEFLPRGSLFRLLQRN-TTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKH 657 (783)
Q Consensus 579 ~lV~E~~~ggsL~~~L~~~-~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~ 657 (783)
+++|||+++++|.+++... ...+++..++.++.|++.||+|||+.+ ++|+||||+|||+++++.+||+|||++....
T Consensus 78 ~lv~e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~--i~H~dlkp~nil~~~~~~~kl~df~~~~~~~ 155 (263)
T cd05052 78 YIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN--FIHRDLAARNCLVGENHLVKVADFGLSRLMT 155 (263)
T ss_pred EEEEEeCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhCC--EeecccCcceEEEcCCCcEEeCCCccccccc
Confidence 9999999999999999653 345889999999999999999999988 9999999999999999999999999987654
Q ss_pred cccccc-cCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCChHHHHHHhhcccccccCCCCCCHHH
Q 003963 658 ETYLTT-KTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELAT-EKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRW 735 (783)
Q Consensus 658 ~~~~~~-~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~l 735 (783)
...... ....++..|+|||.+.+..++.++|||||||++|+|++ |..||...+..+....+.. ......+..++.++
T Consensus 156 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 234 (263)
T cd05052 156 GDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEK-GYRMERPEGCPPKV 234 (263)
T ss_pred cceeeccCCCCCccccCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHC-CCCCCCCCCCCHHH
Confidence 432111 12234568999999999999999999999999999998 9999988777666555432 23456677889999
Q ss_pred HHHHHHhhhhCCCCCCCHHHHHHHHHHH
Q 003963 736 AAIVESCWHSDPQCRPSFQELVDKLRDL 763 (783)
Q Consensus 736 ~~LI~~cL~~dP~~RPsa~ell~~L~~L 763 (783)
.++|.+||..+|.+||++.++++.|+.+
T Consensus 235 ~~li~~cl~~~p~~Rp~~~~l~~~l~~~ 262 (263)
T cd05052 235 YELMRACWQWNPSDRPSFAEIHQAFETM 262 (263)
T ss_pred HHHHHHHccCCcccCCCHHHHHHHHHhh
Confidence 9999999999999999999999998765
No 118
>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,
Probab=100.00 E-value=1.8e-38 Score=347.62 Aligned_cols=258 Identities=21% Similarity=0.355 Sum_probs=213.2
Q ss_pred cceeEeeeeccCCcEEEEEEEEeC-CceEEEEEEecccC-CHHHHHHHHHHHHHHHhCCCCceeeEeceeecCCceEEEE
Q 003963 505 EDLTIGEQIGQGSCGTVYHAVWYG-SQDVAVKVFSRQEY-SDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIVT 582 (783)
Q Consensus 505 ~~y~i~~~LG~G~fG~Vy~a~~~~-~~~vAiK~i~~~~~-~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lV~ 582 (783)
++|++.+.||+|+||.||++.+.. ++.||+|++.+... .......+.+|+.+++.++|+||+++++++..++.+|+||
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (331)
T cd05597 1 DDFEILKVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLVNGDRRWITNLHYAFQDENNLYLVM 80 (331)
T ss_pred CCceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCceEEEEecCCeEEEEE
Confidence 479999999999999999999765 56799999975332 2334566888999999999999999999999999999999
Q ss_pred EecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCcccccccc-
Q 003963 583 EFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETYL- 661 (783)
Q Consensus 583 E~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~~- 661 (783)
||+++++|.+++.+....+++..+..++.||+.||+|||+++ |+||||||+|||++.++.+||+|||++........
T Consensus 81 e~~~g~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~--ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~ 158 (331)
T cd05597 81 DYYVGGDLLTLLSKFEDRLPEDMARFYLAEMVLAIDSVHQLG--YVHRDIKPDNVLLDKNGHIRLADFGSCLRLLADGTV 158 (331)
T ss_pred ecCCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC--eEECCCCHHHEEECCCCCEEEEECCceeecCCCCCc
Confidence 999999999999876667899999999999999999999998 99999999999999999999999999865443221
Q ss_pred cccCCCCCCcccCcccccC-----CCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhcccccccCC---CCCCH
Q 003963 662 TTKTGKGTPQWMAPEVLRN-----EPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLEIP---KDVDP 733 (783)
Q Consensus 662 ~~~~~~Gt~~Y~aPE~~~~-----~~~s~~sDIwSLG~il~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~~---~~~s~ 733 (783)
.....+||+.|+|||++.+ ..++.++|||||||++|+|++|+.||...+..+....+........++ ..++.
T Consensus 159 ~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 238 (331)
T cd05597 159 QSNVAVGTPDYISPEILQAMEDGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKEHFQFPPDVTDVSE 238 (331)
T ss_pred cccceeccccccCHHHHhhccccccCCCCcceeehhhhHHHHHhhCCCCCCCCCHHHHHHHHHcCCCcccCCCccCCCCH
Confidence 2223468999999999873 346789999999999999999999998877766655553333223333 34789
Q ss_pred HHHHHHHHhhhhCCCC--CCCHHHHHHHHHHHHHHHhhc
Q 003963 734 RWAAIVESCWHSDPQC--RPSFQELVDKLRDLQRQYFQA 770 (783)
Q Consensus 734 ~l~~LI~~cL~~dP~~--RPsa~ell~~L~~L~~~~f~~ 770 (783)
.+++||.+||..++++ |+++.++ +.|+||..
T Consensus 239 ~~~~li~~ll~~~~~r~~r~~~~~~------l~hp~~~~ 271 (331)
T cd05597 239 EAKDLIRRLICSPETRLGRNGLQDF------KDHPFFEG 271 (331)
T ss_pred HHHHHHHHHccCcccccCCCCHHHH------hcCCCCCC
Confidence 9999999988654443 7899999 67888854
No 119
>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw
Probab=100.00 E-value=1.4e-38 Score=348.71 Aligned_cols=259 Identities=21% Similarity=0.366 Sum_probs=214.8
Q ss_pred cceeEeeeeccCCcEEEEEEEEeC-CceEEEEEEecccC-CHHHHHHHHHHHHHHHhCCCCceeeEeceeecCCceEEEE
Q 003963 505 EDLTIGEQIGQGSCGTVYHAVWYG-SQDVAVKVFSRQEY-SDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIVT 582 (783)
Q Consensus 505 ~~y~i~~~LG~G~fG~Vy~a~~~~-~~~vAiK~i~~~~~-~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lV~ 582 (783)
++|++.++||+|+||.||++.+.. ++.||+|++.+... .......+.+|+.++..++|+||+++++++...+.+|+||
T Consensus 1 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (332)
T cd05623 1 EDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDNQWITTLHYAFQDENNLYLVM 80 (332)
T ss_pred CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCEEEEEE
Confidence 479999999999999999999865 45699999865432 2233456788999999999999999999999999999999
Q ss_pred EecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCcccccc-cc
Q 003963 583 EFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHET-YL 661 (783)
Q Consensus 583 E~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~~~-~~ 661 (783)
||+++|+|.+++.+....+++..+..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||++...... ..
T Consensus 81 ey~~~g~L~~~l~~~~~~l~~~~~~~~~~qi~~al~~lH~~~--iiHrDlkp~Nili~~~~~~kL~DfG~a~~~~~~~~~ 158 (332)
T cd05623 81 DYYVGGDLLTLLSKFEDRLPEDMARFYLAEMVIAIDSVHQLH--YVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTV 158 (332)
T ss_pred eccCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC--eEecCCCHHHEEECCCCCEEEeecchheecccCCcc
Confidence 999999999999876667899999999999999999999998 999999999999999999999999998654322 12
Q ss_pred cccCCCCCCcccCccccc-----CCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhcccccccCC---CCCCH
Q 003963 662 TTKTGKGTPQWMAPEVLR-----NEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLEIP---KDVDP 733 (783)
Q Consensus 662 ~~~~~~Gt~~Y~aPE~~~-----~~~~s~~sDIwSLG~il~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~~---~~~s~ 733 (783)
.....+||+.|+|||++. ...++.++|||||||++|+|++|+.||...+..+.+..+........+| ..+++
T Consensus 159 ~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwSlGvil~ell~g~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~s~ 238 (332)
T cd05623 159 QSSVAVGTPDYISPEILQAMEDGKGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKERFQFPAQVTDVSE 238 (332)
T ss_pred eecccccCccccCHHHHhccccCCCCCCCcCCEEeeHHHHHHHhcCCCCCCCCCHHHHHHHHhCCCccccCCCccccCCH
Confidence 223457999999999986 3457889999999999999999999999888777766664433333333 35799
Q ss_pred HHHHHHHHhhhhCCCC--CCCHHHHHHHHHHHHHHHhhcC
Q 003963 734 RWAAIVESCWHSDPQC--RPSFQELVDKLRDLQRQYFQAS 771 (783)
Q Consensus 734 ~l~~LI~~cL~~dP~~--RPsa~ell~~L~~L~~~~f~~~ 771 (783)
++.+||.+||..++.+ |+++.++ ++|+||+..
T Consensus 239 ~~~~li~~ll~~~~~r~~r~~~~~~------~~h~~f~~~ 272 (332)
T cd05623 239 DAKDLIRRLICSREHRLGQNGIEDF------KQHPFFTGI 272 (332)
T ss_pred HHHHHHHHHccChhhhcCCCCHHHH------hCCCCcCCC
Confidence 9999999999655444 6899999 678888653
No 120
>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto
Probab=100.00 E-value=2.4e-38 Score=347.71 Aligned_cols=263 Identities=30% Similarity=0.536 Sum_probs=214.6
Q ss_pred ccccccceeEeeeeccCCcEEEEEEEEeC------CceEEEEEEecccCCHHHHHHHHHHHHHHHhC-CCCceeeEecee
Q 003963 500 YEILWEDLTIGEQIGQGSCGTVYHAVWYG------SQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRL-RHPNVLLFMGAV 572 (783)
Q Consensus 500 ~e~~~~~y~i~~~LG~G~fG~Vy~a~~~~------~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l-~HpnIv~l~~~~ 572 (783)
|++..++|++.+.||+|+||.||+|.+.+ ++.||+|++.... .......+..|+.++..+ +|+||+++++++
T Consensus 2 ~~~~~~~~~i~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~-~~~~~~~~~~E~~~~~~l~~h~niv~~~~~~ 80 (337)
T cd05054 2 WEFPRDRLKLGKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGA-TASEYKALMTELKILIHIGHHLNVVNLLGAC 80 (337)
T ss_pred cccCHHHhhhhcccccCcCceEEeccccccccccccceeeeeeccCCC-CHHHHHHHHHHHHHHHhhccCcchhheeeeE
Confidence 45566799999999999999999997533 2579999987543 233456778899999999 799999999988
Q ss_pred ec-CCceEEEEEecCCCCHHHHHhhcC-----------------------------------------------------
Q 003963 573 TS-PQRLCIVTEFLPRGSLFRLLQRNT----------------------------------------------------- 598 (783)
Q Consensus 573 ~~-~~~~~lV~E~~~ggsL~~~L~~~~----------------------------------------------------- 598 (783)
.. ...++++|||+++++|.+++....
T Consensus 81 ~~~~~~~~~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (337)
T cd05054 81 TKPGGPLMVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSASSGFIEDKSLSDVEEDE 160 (337)
T ss_pred ecCCCCEEEEEecCCCCCHHHHHHhccccccccccccccccccccccccccccccCCccccccccccccCcchhhcccch
Confidence 65 456889999999999999985421
Q ss_pred -------CcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCccccccc--ccccCCCCC
Q 003963 599 -------TKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETY--LTTKTGKGT 669 (783)
Q Consensus 599 -------~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~--~~~~~~~Gt 669 (783)
..+++..+..++.||+.||.|||+++ |+||||||+|||++.++.++|+|||++....... .......++
T Consensus 161 ~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~~--ivHrDikp~Nill~~~~~vkL~DfG~a~~~~~~~~~~~~~~~~~~ 238 (337)
T cd05054 161 EGDELYKEPLTLEDLISYSFQVARGMEFLASRK--CIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDARLP 238 (337)
T ss_pred hhhHHhhcCCCHHHHHHHHHHHHHHHHHHHhCC--eecCCCCcceEEEeCCCcEEEeccccchhcccCcchhhccCCCCC
Confidence 25788999999999999999999998 9999999999999999999999999997643221 122234457
Q ss_pred CcccCcccccCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCChHHHHHHhhcccccccCCCCCCHHHHHHHHHhhhhCCC
Q 003963 670 PQWMAPEVLRNEPSDEKSDVYSFGVILWELAT-EKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAAIVESCWHSDPQ 748 (783)
Q Consensus 670 ~~Y~aPE~~~~~~~s~~sDIwSLG~il~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~l~~LI~~cL~~dP~ 748 (783)
..|+|||++.+..++.++|||||||+||+|++ |..||......+.+............+..+++++.+++.+||+.+|+
T Consensus 239 ~~y~aPE~~~~~~~~~~~Di~SlGv~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~ 318 (337)
T cd05054 239 LKWMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQIDEEFCRRLKEGTRMRAPEYATPEIYSIMLDCWHNNPE 318 (337)
T ss_pred ccccCcHHhcCCCCCccccHHHHHHHHHHHHHcCCCCCCCCCccHHHHHHHhccCCCCCCccCCHHHHHHHHHHccCChh
Confidence 78999999999999999999999999999998 99999775443333222222234445667889999999999999999
Q ss_pred CCCCHHHHHHHHHHHHH
Q 003963 749 CRPSFQELVDKLRDLQR 765 (783)
Q Consensus 749 ~RPsa~ell~~L~~L~~ 765 (783)
+||++.+++++|+++.+
T Consensus 319 ~RPs~~ell~~l~~~~~ 335 (337)
T cd05054 319 DRPTFSELVEILGDLLQ 335 (337)
T ss_pred hCcCHHHHHHHHHHHHh
Confidence 99999999999998765
No 121
>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=8.6e-38 Score=338.12 Aligned_cols=266 Identities=30% Similarity=0.570 Sum_probs=222.7
Q ss_pred cccccccceeEeeeeccCCcEEEEEEEEeC--------CceEEEEEEecccCCHHHHHHHHHHHHHHHhC-CCCceeeEe
Q 003963 499 DYEILWEDLTIGEQIGQGSCGTVYHAVWYG--------SQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRL-RHPNVLLFM 569 (783)
Q Consensus 499 ~~e~~~~~y~i~~~LG~G~fG~Vy~a~~~~--------~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l-~HpnIv~l~ 569 (783)
.+++..++|.+.+.||+|+||.||++.+.. ...+|+|++.... .......+.+|+.+++.+ +||||++++
T Consensus 12 ~~~~~~~~~~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~-~~~~~~~~~~e~~~l~~l~~h~~i~~~~ 90 (307)
T cd05098 12 RWEVPRDRLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDA-TEKDLSDLISEMEMMKMIGKHKNIINLL 90 (307)
T ss_pred cceeehHHeEEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCC-ChHHHHHHHHHHHHHHHhcCCCCEeeEE
Confidence 456777899999999999999999998643 1359999987643 233456788899999999 799999999
Q ss_pred ceeecCCceEEEEEecCCCCHHHHHhhcC---------------CcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCC
Q 003963 570 GAVTSPQRLCIVTEFLPRGSLFRLLQRNT---------------TKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKS 634 (783)
Q Consensus 570 ~~~~~~~~~~lV~E~~~ggsL~~~L~~~~---------------~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp 634 (783)
+++...+..|+||||+++++|.+++.... ..+++..++.++.|++.||+|||+++ ++|+||||
T Consensus 91 ~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~g--i~H~dlkp 168 (307)
T cd05098 91 GACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLASKK--CIHRDLAA 168 (307)
T ss_pred EEEecCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCC--cccccccH
Confidence 99999999999999999999999997532 24788899999999999999999998 99999999
Q ss_pred CCEEEcCCCcEEEEecCCCccccccccc--ccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCCh
Q 003963 635 SNLLVDKHWTVKVGDFGLSRLKHETYLT--TKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELAT-EKIPWDNLNS 711 (783)
Q Consensus 635 ~NILl~~~~~vkL~DFGla~~~~~~~~~--~~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~ellt-G~~Pf~~~~~ 711 (783)
+|||++.++.++|+|||++......... .....+++.|+|||++.+..++.++|||||||++|+|++ |..||...+.
T Consensus 169 ~Nill~~~~~~kL~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~~g~~p~~~~~~ 248 (307)
T cd05098 169 RNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPV 248 (307)
T ss_pred HheEEcCCCcEEECCCcccccccccchhhccccCCCccceeChHHhccCCCCcHHHHHHHHHHHHHHHcCCCCCCCcCCH
Confidence 9999999999999999998755432111 112234578999999999889999999999999999998 8999988776
Q ss_pred HHHHHHhhcccccccCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHh
Q 003963 712 MQVIGAVGFMNQRLEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYF 768 (783)
Q Consensus 712 ~~~~~~i~~~~~~~~~~~~~s~~l~~LI~~cL~~dP~~RPsa~ell~~L~~L~~~~f 768 (783)
.+....+. .......+..++.++.+||.+||..+|.+||++.++++.|+++.....
T Consensus 249 ~~~~~~~~-~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~evl~~l~~~~~~~~ 304 (307)
T cd05098 249 EELFKLLK-EGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILALTS 304 (307)
T ss_pred HHHHHHHH-cCCCCCCCCcCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHHHHhh
Confidence 66555443 233456677889999999999999999999999999999999877643
No 122
>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]
Probab=100.00 E-value=8.4e-39 Score=356.10 Aligned_cols=251 Identities=26% Similarity=0.346 Sum_probs=210.2
Q ss_pred ccceeEeeeeccCCcEEEEEEEEeC-CceEEEEEEecccCCHHHHHHHHHHHHHHHhCC-C-----CceeeEeceeecCC
Q 003963 504 WEDLTIGEQIGQGSCGTVYHAVWYG-SQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLR-H-----PNVLLFMGAVTSPQ 576 (783)
Q Consensus 504 ~~~y~i~~~LG~G~fG~Vy~a~~~~-~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~-H-----pnIv~l~~~~~~~~ 576 (783)
.-+|+|.+.||+|+||.|.+|.+.. ++.||||+++... ....+...|+.+|..|+ | -|||+++++|...+
T Consensus 185 ~~rY~V~e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN~k---~f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F~fr~ 261 (586)
T KOG0667|consen 185 AYRYEVLEVLGKGSFGQVVKAYDHKTGEIVAIKIIKNKK---RFLRQAQIEIRILELLNKHDPDDKYNIVRMLDYFYFRN 261 (586)
T ss_pred EEEEEEEEEecccccceeEEEEecCCCcEEEEEeeccCh---HHHHHHHHHHHHHHHHhccCCCCCeeEEEeeecccccc
Confidence 3489999999999999999999876 5779999997654 45566778999999997 4 38999999999999
Q ss_pred ceEEEEEecCCCCHHHHHhhc-CCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcC--CCcEEEEecCCC
Q 003963 577 RLCIVTEFLPRGSLFRLLQRN-TTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDK--HWTVKVGDFGLS 653 (783)
Q Consensus 577 ~~~lV~E~~~ggsL~~~L~~~-~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~--~~~vkL~DFGla 653 (783)
++|||+|.+ ..+|+++|+.+ ...++...+..++.||+.||.+||+.+ |||+||||+||||.. ...|||+|||.|
T Consensus 262 HlciVfELL-~~NLYellK~n~f~Glsl~~ir~~~~Qil~~L~~L~~l~--IIHcDLKPENILL~~~~r~~vKVIDFGSS 338 (586)
T KOG0667|consen 262 HLCIVFELL-STNLYELLKNNKFRGLSLPLVRKFAQQILTALLFLHELG--IIHCDLKPENILLKDPKRSRIKVIDFGSS 338 (586)
T ss_pred ceeeeehhh-hhhHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC--eeeccCChhheeeccCCcCceeEEecccc
Confidence 999999999 56999999764 355899999999999999999999998 999999999999964 347999999999
Q ss_pred cccccccccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccccc---------
Q 003963 654 RLKHETYLTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQR--------- 724 (783)
Q Consensus 654 ~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~elltG~~Pf~~~~~~~~~~~i~~~~~~--------- 724 (783)
+....... +.+.+..|+|||++.|.+|+.+.||||||||++||++|.+.|.+.+..+.+..|....+.
T Consensus 339 c~~~q~vy---tYiQSRfYRAPEVILGlpY~~~IDmWSLGCIlAEL~tG~PLfpG~ne~DQl~~I~e~lG~Pp~~mL~~~ 415 (586)
T KOG0667|consen 339 CFESQRVY---TYIQSRFYRAPEVILGLPYDTAIDMWSLGCILAELFTGEPLFPGDNEYDQLARIIEVLGLPPPKMLDTA 415 (586)
T ss_pred cccCCcce---eeeeccccccchhhccCCCCCccceeehhhhHHhHhcCccccCCCCHHHHHHHHHHHhCCCCHHHHHhc
Confidence 87765432 556789999999999999999999999999999999999999988877666543211100
Q ss_pred -----------------------------------------ccCCC-----------CCCHHHHHHHHHhhhhCCCCCCC
Q 003963 725 -----------------------------------------LEIPK-----------DVDPRWAAIVESCWHSDPQCRPS 752 (783)
Q Consensus 725 -----------------------------------------~~~~~-----------~~s~~l~~LI~~cL~~dP~~RPs 752 (783)
...|. .-...+.+||++||.+||.+|+|
T Consensus 416 ~~~~kff~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~P~~~~~l~~~~~~~~~~~F~dflk~~L~~dP~~R~t 495 (586)
T KOG0667|consen 416 KKAHKFFTSLKGFPRLCVETSAPRGTKSPEVRKYYRKARLERRGPPGSRSLESGLPKADDKLFIDFLKRCLEWDPAERIT 495 (586)
T ss_pred cccceehhccCCceeeeeeecccccccchhhhhhhhhhcccccCCCCCcccchhcccccHHHHHHHHHHHhccCchhcCC
Confidence 00110 11235799999999999999999
Q ss_pred HHHHHHHHHHHHHHHhh
Q 003963 753 FQELVDKLRDLQRQYFQ 769 (783)
Q Consensus 753 a~ell~~L~~L~~~~f~ 769 (783)
+.+. |+|+||.
T Consensus 496 p~qa------l~Hpfl~ 506 (586)
T KOG0667|consen 496 PAQA------LNHPFLT 506 (586)
T ss_pred HHHH------hcCcccc
Confidence 9999 7899986
No 123
>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=100.00 E-value=4.1e-38 Score=348.60 Aligned_cols=255 Identities=26% Similarity=0.352 Sum_probs=206.0
Q ss_pred cccceeEeeeeccCCcEEEEEEEEeC-CceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEeceeecCC-----
Q 003963 503 LWEDLTIGEQIGQGSCGTVYHAVWYG-SQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQ----- 576 (783)
Q Consensus 503 ~~~~y~i~~~LG~G~fG~Vy~a~~~~-~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~----- 576 (783)
..++|++.+.||+|+||.||++.+.. ++.||||++............+.+|+.+++.++||||+++++++....
T Consensus 19 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 98 (359)
T cd07876 19 VLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKSLEEF 98 (359)
T ss_pred hhhceEEEEEeecCCCEEEEEEEEcCCCceeEEEEecccccchhHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCCcccc
Confidence 35789999999999999999999754 578999999766545555667889999999999999999999986543
Q ss_pred -ceEEEEEecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCcc
Q 003963 577 -RLCIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRL 655 (783)
Q Consensus 577 -~~~lV~E~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~ 655 (783)
.+|+||||+++ +|.+.+.. .+++..+..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||++..
T Consensus 99 ~~~~lv~e~~~~-~l~~~~~~---~~~~~~~~~~~~qi~~~L~~LH~~~--ivHrDlkp~NIl~~~~~~~kl~Dfg~a~~ 172 (359)
T cd07876 99 QDVYLVMELMDA-NLCQVIHM---ELDHERMSYLLYQMLCGIKHLHSAG--IIHRDLKPSNIVVKSDCTLKILDFGLART 172 (359)
T ss_pred ceeEEEEeCCCc-CHHHHHhc---cCCHHHHHHHHHHHHHHHHHHHhCC--cccCCCCHHHEEECCCCCEEEecCCCccc
Confidence 47999999965 67776643 3788889999999999999999998 99999999999999999999999999875
Q ss_pred cccccccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhcc--------------
Q 003963 656 KHETYLTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFM-------------- 721 (783)
Q Consensus 656 ~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~elltG~~Pf~~~~~~~~~~~i~~~-------------- 721 (783)
..... ......||+.|+|||++.+..++.++|||||||++|+|++|+.||...+.......+...
T Consensus 173 ~~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (359)
T cd07876 173 ACTNF-MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQGTDHIDQWNKVIEQLGTPSAEFMNRLQP 251 (359)
T ss_pred cccCc-cCCCCcccCCCCCchhccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCcHHHHHHHHH
Confidence 43322 223457899999999999999999999999999999999999999876543322111000
Q ss_pred ------cccc--------------------cCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhc
Q 003963 722 ------NQRL--------------------EIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQA 770 (783)
Q Consensus 722 ------~~~~--------------------~~~~~~s~~l~~LI~~cL~~dP~~RPsa~ell~~L~~L~~~~f~~ 770 (783)
.... ......++++.+||.+||..||.+|||+.++ |.|+||+.
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~------l~hp~~~~ 320 (359)
T cd07876 252 TVRNYVENRPQYPGISFEELFPDWIFPSESERDKLKTSQARDLLSKMLVIDPDKRISVDEA------LRHPYITV 320 (359)
T ss_pred HHHHHHhhCCCCCCcchhhhccccccccccccccccchhHHHHHHHHhccCcccCCCHHHH------hcCchhhh
Confidence 0000 0112246789999999999999999999999 67788764
No 124
>PTZ00284 protein kinase; Provisional
Probab=100.00 E-value=1.4e-37 Score=356.45 Aligned_cols=255 Identities=20% Similarity=0.281 Sum_probs=200.0
Q ss_pred cccceeEeeeeccCCcEEEEEEEEeC-CceEEEEEEecccCCHHHHHHHHHHHHHHHhCCC------CceeeEeceeecC
Q 003963 503 LWEDLTIGEQIGQGSCGTVYHAVWYG-SQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRH------PNVLLFMGAVTSP 575 (783)
Q Consensus 503 ~~~~y~i~~~LG~G~fG~Vy~a~~~~-~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~H------pnIv~l~~~~~~~ 575 (783)
..++|++.++||+|+||.||+|.+.. ++.||||++.... .....+..|+.+++.++| .+|+++++++...
T Consensus 127 ~~~~y~i~~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~~---~~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~~~~~~ 203 (467)
T PTZ00284 127 STQRFKILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNVP---KYTRDAKIEIQFMEKVRQADPADRFPLMKIQRYFQNE 203 (467)
T ss_pred CCCcEEEEEEEEeccCEEEEEEEEcCCCeEEEEEEEecch---hhHHHHHHHHHHHHHHhhcCcccCcceeeeEEEEEcC
Confidence 35789999999999999999999865 4679999986432 223445667777777754 4588999888764
Q ss_pred -CceEEEEEecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHh-CCCCEEecCCCCCCEEEcCCC----------
Q 003963 576 -QRLCIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHH-CNPPIIHRDLKSSNLLVDKHW---------- 643 (783)
Q Consensus 576 -~~~~lV~E~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~-~~~~IvHrDIKp~NILl~~~~---------- 643 (783)
.++|+|||++ +++|.+++.+. ..+++..+..++.||+.||.|||+ .+ ||||||||+||||+.++
T Consensus 204 ~~~~~iv~~~~-g~~l~~~l~~~-~~l~~~~~~~i~~qi~~aL~yLH~~~g--IiHrDlKP~NILl~~~~~~~~~~~~~~ 279 (467)
T PTZ00284 204 TGHMCIVMPKY-GPCLLDWIMKH-GPFSHRHLAQIIFQTGVALDYFHTELH--LMHTDLKPENILMETSDTVVDPVTNRA 279 (467)
T ss_pred CceEEEEEecc-CCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHhcCC--eecCCCCHHHEEEecCCcccccccccc
Confidence 5789999999 77899988764 468999999999999999999997 58 99999999999998665
Q ss_pred ------cEEEEecCCCcccccccccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHH
Q 003963 644 ------TVKVGDFGLSRLKHETYLTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGA 717 (783)
Q Consensus 644 ------~vkL~DFGla~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~elltG~~Pf~~~~~~~~~~~ 717 (783)
.+||+|||++..... .....+||+.|+|||++.+..++.++|||||||+||||++|++||...+....+..
T Consensus 280 ~~~~~~~vkl~DfG~~~~~~~---~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~~~~~ 356 (467)
T PTZ00284 280 LPPDPCRVRICDLGGCCDERH---SRTAIVSTRHYRSPEVVLGLGWMYSTDMWSMGCIIYELYTGKLLYDTHDNLEHLHL 356 (467)
T ss_pred cCCCCceEEECCCCccccCcc---ccccccCCccccCcHHhhcCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHH
Confidence 499999998754322 22356789999999999999999999999999999999999999987765543332
Q ss_pred hhcccccc-------------------------cC-C--------------CCCCHHHHHHHHHhhhhCCCCCCCHHHHH
Q 003963 718 VGFMNQRL-------------------------EI-P--------------KDVDPRWAAIVESCWHSDPQCRPSFQELV 757 (783)
Q Consensus 718 i~~~~~~~-------------------------~~-~--------------~~~s~~l~~LI~~cL~~dP~~RPsa~ell 757 (783)
+......+ .. + ...++.+.+||.+||+.||.+|||+.|+
T Consensus 357 i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~R~ta~e~- 435 (467)
T PTZ00284 357 MEKTLGRLPSEWAGRCGTEEARLLYNSAGQLRPCTDPKHLARIARARPVREVIRDDLLCDLIYGLLHYDRQKRLNARQM- 435 (467)
T ss_pred HHHHcCCCCHHHHhhccchhHHHHhhhcccccccCCHHHHHhhhcccchhhhhchHHHHHHHHHhCCcChhhCCCHHHH-
Confidence 21111000 00 0 0113567899999999999999999999
Q ss_pred HHHHHHHHHHhhcCcC
Q 003963 758 DKLRDLQRQYFQASRS 773 (783)
Q Consensus 758 ~~L~~L~~~~f~~~~~ 773 (783)
|.|+||+....
T Consensus 436 -----L~Hp~~~~~~~ 446 (467)
T PTZ00284 436 -----TTHPYVLKYYP 446 (467)
T ss_pred -----hcCccccccCC
Confidence 67899976433
No 125
>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,
Probab=100.00 E-value=5.7e-39 Score=350.55 Aligned_cols=253 Identities=28% Similarity=0.400 Sum_probs=209.6
Q ss_pred eeeccCCcEEEEEEEEeC-CceEEEEEEecccCC-HHHHHHHHHHHH-HHHhCCCCceeeEeceeecCCceEEEEEecCC
Q 003963 511 EQIGQGSCGTVYHAVWYG-SQDVAVKVFSRQEYS-DEVIHSFRQEVS-LMKRLRHPNVLLFMGAVTSPQRLCIVTEFLPR 587 (783)
Q Consensus 511 ~~LG~G~fG~Vy~a~~~~-~~~vAiK~i~~~~~~-~~~~~~~~~Ei~-il~~l~HpnIv~l~~~~~~~~~~~lV~E~~~g 587 (783)
+.||+|+||.||+|.+.. ++.||||++...... ......+..|.. +++.++||||+++++++...+.+|+||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~hp~iv~~~~~~~~~~~~~lv~e~~~~ 80 (325)
T cd05604 1 KVIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTTEKLYFVLDFVNG 80 (325)
T ss_pred CceeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHHhCCCCCCccEEEEEecCCEEEEEEcCCCC
Confidence 469999999999999764 568999999765322 223344555554 57789999999999999999999999999999
Q ss_pred CCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCcccccccccccCCC
Q 003963 588 GSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETYLTTKTGK 667 (783)
Q Consensus 588 gsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~~ 667 (783)
++|..++... ..+++..+..++.||+.||+|||++| |+||||||+||||+.++.+||+|||++.............+
T Consensus 81 ~~L~~~l~~~-~~~~~~~~~~~~~qi~~al~~lH~~g--ivH~Dlkp~NIll~~~~~~kL~DfG~~~~~~~~~~~~~~~~ 157 (325)
T cd05604 81 GELFFHLQRE-RSFPEPRARFYAAEIASALGYLHSIN--IVYRDLKPENILLDSQGHVVLTDFGLCKEGIAQSDTTTTFC 157 (325)
T ss_pred CCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCC--eeecCCCHHHeEECCCCCEEEeecCCcccCCCCCCCccccc
Confidence 9999988753 46899999999999999999999998 99999999999999999999999999875433333334567
Q ss_pred CCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhcccccccCCCCCCHHHHHHHHHhhhhCC
Q 003963 668 GTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAAIVESCWHSDP 747 (783)
Q Consensus 668 Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~l~~LI~~cL~~dP 747 (783)
||+.|+|||++.+..++.++|||||||++|+|++|..||...+..+....+. .....++..++..+.++|.+||..+|
T Consensus 158 gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~ll~~ll~~~p 235 (325)
T cd05604 158 GTPEYLAPEVIRKQPYDNTVDWWCLGAVLYEMLYGLPPFYCRDVAEMYDNIL--HKPLVLRPGASLTAWSILEELLEKDR 235 (325)
T ss_pred CChhhCCHHHHcCCCCCCcCccccccceehhhhcCCCCCCCCCHHHHHHHHH--cCCccCCCCCCHHHHHHHHHHhccCH
Confidence 9999999999999999999999999999999999999999887776665553 23445566789999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHhhc
Q 003963 748 QCRPSFQELVDKLRDLQRQYFQA 770 (783)
Q Consensus 748 ~~RPsa~ell~~L~~L~~~~f~~ 770 (783)
.+||++.+.++.+ +.|+||+.
T Consensus 236 ~~R~~~~~~~~~i--~~h~~f~~ 256 (325)
T cd05604 236 QRRLGAKEDFLEI--QEHPFFES 256 (325)
T ss_pred HhcCCCCCCHHHH--hcCCCcCC
Confidence 9999886443333 57788864
No 126
>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows
Probab=100.00 E-value=5.3e-38 Score=330.19 Aligned_cols=251 Identities=34% Similarity=0.608 Sum_probs=214.5
Q ss_pred ccceeEeeeeccCCcEEEEEEEEeCCceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEeceeecCCceEEEEE
Q 003963 504 WEDLTIGEQIGQGSCGTVYHAVWYGSQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIVTE 583 (783)
Q Consensus 504 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lV~E 583 (783)
..+|++.+.||+|+||.||++.+..+..+|+|++....... ..+.+|+.+++.++||||+++++++...+..|+|||
T Consensus 3 ~~~~~~~~~lg~G~~~~v~~~~~~~~~~~~iK~~~~~~~~~---~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e 79 (256)
T cd05059 3 PSELTFLKELGSGQFGVVHLGKWRGKIDVAIKMIREGAMSE---DDFIEEAKVMMKLSHPNLVQLYGVCTKQRPIFIVTE 79 (256)
T ss_pred hHHcchhhhhccCCCceEEEeEecCCccEEEEEeccCCCCH---HHHHHHHHHHHhCCCCCEEEEEEEEcCCCceEEEEe
Confidence 35788999999999999999998777789999987554433 357789999999999999999999999999999999
Q ss_pred ecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCcccccccccc
Q 003963 584 FLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETYLTT 663 (783)
Q Consensus 584 ~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~~~~ 663 (783)
|+++++|.+++......+++..++.++.||+.||+|||+.+ |+|+||||+||+++.++.+||+|||+++.........
T Consensus 80 ~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~--i~H~dl~p~ni~i~~~~~~kl~dfg~~~~~~~~~~~~ 157 (256)
T cd05059 80 YMANGCLLNYLRERKGKLGTEWLLDMCSDVCEAMEYLESNG--FIHRDLAARNCLVGEDNVVKVSDFGLARYVLDDQYTS 157 (256)
T ss_pred cCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCC--cccccccHhhEEECCCCcEEECCcccceecccccccc
Confidence 99999999999876667899999999999999999999998 9999999999999999999999999987654322111
Q ss_pred -cCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCChHHHHHHhhcccccccCCCCCCHHHHHHHHH
Q 003963 664 -KTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELAT-EKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAAIVES 741 (783)
Q Consensus 664 -~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~l~~LI~~ 741 (783)
....++..|+|||.+.+..++.++|||||||++|+|++ |..||......+....+. .......+..++..+.+++.+
T Consensus 158 ~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~li~~ 236 (256)
T cd05059 158 SQGTKFPVKWAPPEVFDYSRFSSKSDVWSFGVLMWEVFSEGKMPYERFSNSEVVESVS-AGYRLYRPKLAPTEVYTIMYS 236 (256)
T ss_pred cCCCCCCccccCHHHhccCCCCchhhHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHH-cCCcCCCCCCCCHHHHHHHHH
Confidence 11223457999999999899999999999999999999 899998877766655543 233445667789999999999
Q ss_pred hhhhCCCCCCCHHHHHHHH
Q 003963 742 CWHSDPQCRPSFQELVDKL 760 (783)
Q Consensus 742 cL~~dP~~RPsa~ell~~L 760 (783)
||..+|.+||++.++++.|
T Consensus 237 cl~~~p~~Rpt~~~~l~~l 255 (256)
T cd05059 237 CWHEKPEDRPAFKKLLSQL 255 (256)
T ss_pred HhcCChhhCcCHHHHHHHh
Confidence 9999999999999998875
No 127
>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt
Probab=100.00 E-value=3.7e-38 Score=335.18 Aligned_cols=254 Identities=30% Similarity=0.556 Sum_probs=215.6
Q ss_pred ccceeEeeeeccCCcEEEEEEEEeC------CceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEeceeecCCc
Q 003963 504 WEDLTIGEQIGQGSCGTVYHAVWYG------SQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQR 577 (783)
Q Consensus 504 ~~~y~i~~~LG~G~fG~Vy~a~~~~------~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~ 577 (783)
.++|.+.+.||+|+||.||+|.+.. .+.||||++.... ..+....+.+|+.+++.++||||+++++++.....
T Consensus 4 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~ 82 (280)
T cd05049 4 RDTIVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETA-SNDARKDFEREAELLTNFQHENIVKFYGVCTEGDP 82 (280)
T ss_pred hHHhhHHhhccccCCceEeeeeeccccCcCCcceEEEEeecccC-CHHHHHHHHHHHHHHHhcCCCCchheeeEEecCCC
Confidence 4678999999999999999998643 2579999986543 33455788999999999999999999999999999
Q ss_pred eEEEEEecCCCCHHHHHhhcC-------------CcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCc
Q 003963 578 LCIVTEFLPRGSLFRLLQRNT-------------TKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWT 644 (783)
Q Consensus 578 ~~lV~E~~~ggsL~~~L~~~~-------------~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~ 644 (783)
.++||||+++++|.+++.... ..+++..+..++.||+.||.|||+++ ++|+||||+||+++.++.
T Consensus 83 ~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~--i~h~dlkp~nili~~~~~ 160 (280)
T cd05049 83 PIMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLASQH--FVHRDLATRNCLVGYDLV 160 (280)
T ss_pred eEEEEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHhhCC--eeccccccceEEEcCCCe
Confidence 999999999999999997542 34788899999999999999999998 999999999999999999
Q ss_pred EEEEecCCCccccccc--ccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCChHHHHHHhhcc
Q 003963 645 VKVGDFGLSRLKHETY--LTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELAT-EKIPWDNLNSMQVIGAVGFM 721 (783)
Q Consensus 645 vkL~DFGla~~~~~~~--~~~~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~ellt-G~~Pf~~~~~~~~~~~i~~~ 721 (783)
++|+|||++....... .......+++.|+|||++.+..++.++|||||||++|+|++ |..||...+.......+. .
T Consensus 161 ~kl~d~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~e~~~~g~~p~~~~~~~~~~~~~~-~ 239 (280)
T cd05049 161 VKIGDFGMSRDVYTTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVVLWEIFTYGKQPWYGLSNEEVIECIT-Q 239 (280)
T ss_pred EEECCcccceecccCcceecCCCCcccceecChhhhccCCcchhhhHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHH-c
Confidence 9999999987543221 11223345788999999999999999999999999999998 999998887776665554 2
Q ss_pred cccccCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHH
Q 003963 722 NQRLEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLR 761 (783)
Q Consensus 722 ~~~~~~~~~~s~~l~~LI~~cL~~dP~~RPsa~ell~~L~ 761 (783)
......+..++..+.+||.+||..||.+||++.++++.|+
T Consensus 240 ~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~~l~ 279 (280)
T cd05049 240 GRLLQRPRTCPSEVYDIMLGCWKRDPQQRINIKDIHERLQ 279 (280)
T ss_pred CCcCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHhh
Confidence 2233455678999999999999999999999999998875
No 128
>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity. Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....
Probab=100.00 E-value=2.7e-38 Score=333.85 Aligned_cols=249 Identities=39% Similarity=0.682 Sum_probs=208.8
Q ss_pred eEeeeeccCCcEEEEEEEEe-----CCceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEeceeecCCceEEEE
Q 003963 508 TIGEQIGQGSCGTVYHAVWY-----GSQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIVT 582 (783)
Q Consensus 508 ~i~~~LG~G~fG~Vy~a~~~-----~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lV~ 582 (783)
++.+.||.|.||.||+|.+. .+..|+||++.. ....+....+.+|+++++.++||||+++++++...+..++||
T Consensus 2 ~~~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~-~~~~~~~~~~~~e~~~l~~l~h~ni~~~~g~~~~~~~~~lv~ 80 (259)
T PF07714_consen 2 KLIKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKP-SSSEEEEEEFLNEIQILRKLRHPNIVKLYGFCIENEPLFLVM 80 (259)
T ss_dssp EEEEEEEEESSEEEEEEEEESTTTSSEEEEEEEEEST-TSSHHHHHHHHHHHHHHHTHSBTTBE-EEEEEESSSSEEEEE
T ss_pred EEeeEEccCCCcEEEEEEEEcccCCCCEEEEEEEecc-ccccccceeeeecccccccccccccccccccccccccccccc
Confidence 56789999999999999988 135699999954 334455788999999999999999999999999888899999
Q ss_pred EecCCCCHHHHHhhc-CCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCccccc--c
Q 003963 583 EFLPRGSLFRLLQRN-TTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHE--T 659 (783)
Q Consensus 583 E~~~ggsL~~~L~~~-~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~~--~ 659 (783)
|||++|+|.++|... ...+++..++.|+.||+.||.|||+++ |+|+||+++||||+.++.+||+|||++..... .
T Consensus 81 e~~~~g~L~~~L~~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~--iiH~~l~~~nill~~~~~~Kl~~f~~~~~~~~~~~ 158 (259)
T PF07714_consen 81 EYCPGGSLDDYLKSKNKEPLSEQQRLSIAIQIAEALSYLHSNN--IIHGNLSPSNILLDSNGQVKLSDFGLSRPISEKSK 158 (259)
T ss_dssp E--TTEBHHHHHHHTCTTTSBHHHHHHHHHHHHHHHHHHHHTT--EEEST-SGGGEEEETTTEEEEESTTTGEETTTSSS
T ss_pred ccccccccccccccccccccccccccccccccccccccccccc--ccccccccccccccccccccccccccccccccccc
Confidence 999999999999876 567999999999999999999999998 99999999999999999999999999876522 1
Q ss_pred cccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCChHHHHHHhhcccccccCCCCCCHHHHHH
Q 003963 660 YLTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELAT-EKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAAI 738 (783)
Q Consensus 660 ~~~~~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~l~~L 738 (783)
........+...|+|||.+.+..++.++||||||+++|||++ |+.||.+.+..+....+ ........+..++..+.++
T Consensus 159 ~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVysfG~~l~ei~~~~~~p~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l 237 (259)
T PF07714_consen 159 YKNDSSQQLPLRYLAPEVLKDGEYTKKSDVYSFGMLLYEILTLGKFPFSDYDNEEIIEKL-KQGQRLPIPDNCPKDIYSL 237 (259)
T ss_dssp EEESTTSESGGGGS-HHHHHHSEESHHHHHHHHHHHHHHHHTTSSGTTTTSCHHHHHHHH-HTTEETTSBTTSBHHHHHH
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc-cccccceeccchhHHHHHH
Confidence 122233346788999999999889999999999999999999 78999999888777676 3445566778899999999
Q ss_pred HHHhhhhCCCCCCCHHHHHHHH
Q 003963 739 VESCWHSDPQCRPSFQELVDKL 760 (783)
Q Consensus 739 I~~cL~~dP~~RPsa~ell~~L 760 (783)
|..||..+|.+||++.++++.|
T Consensus 238 i~~C~~~~p~~RPs~~~i~~~L 259 (259)
T PF07714_consen 238 IQQCWSHDPEKRPSFQEILQEL 259 (259)
T ss_dssp HHHHT-SSGGGS--HHHHHHHH
T ss_pred HHHHcCCChhhCcCHHHHHhcC
Confidence 9999999999999999998765
No 129
>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh
Probab=100.00 E-value=6.3e-38 Score=333.57 Aligned_cols=257 Identities=33% Similarity=0.574 Sum_probs=214.5
Q ss_pred cccccceeEeeeeccCCcEEEEEEEEeC------CceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEeceeec
Q 003963 501 EILWEDLTIGEQIGQGSCGTVYHAVWYG------SQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTS 574 (783)
Q Consensus 501 e~~~~~y~i~~~LG~G~fG~Vy~a~~~~------~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~ 574 (783)
+...++|++.+.||+|+||.||++.+.+ ...||||++.... .......+.+|+.+++.++||||+++++++..
T Consensus 2 ~~~~~~~~~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~-~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~ 80 (277)
T cd05062 2 EVAREKITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAA-SMRERIEFLNEASVMKEFNCHHVVRLLGVVSQ 80 (277)
T ss_pred cccHHHceeeeeeccccCCeEEEEEeccCCCCCceeEEEEEeccccC-CHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcC
Confidence 4556789999999999999999998643 2469999886433 23344568899999999999999999999999
Q ss_pred CCceEEEEEecCCCCHHHHHhhcC---------CcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcE
Q 003963 575 PQRLCIVTEFLPRGSLFRLLQRNT---------TKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTV 645 (783)
Q Consensus 575 ~~~~~lV~E~~~ggsL~~~L~~~~---------~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~v 645 (783)
....++||||+++++|.+++.... ..+++..++.++.|++.||.|||+.+ ++|+||||+|||++.++.+
T Consensus 81 ~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~--~vH~dlkp~Nil~~~~~~~ 158 (277)
T cd05062 81 GQPTLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLNANK--FVHRDLAARNCMVAEDFTV 158 (277)
T ss_pred CCCeEEEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHHHCC--cccCCcchheEEEcCCCCE
Confidence 999999999999999999986532 23567788999999999999999988 9999999999999999999
Q ss_pred EEEecCCCcccccccc--cccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCChHHHHHHhhccc
Q 003963 646 KVGDFGLSRLKHETYL--TTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELAT-EKIPWDNLNSMQVIGAVGFMN 722 (783)
Q Consensus 646 kL~DFGla~~~~~~~~--~~~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~ellt-G~~Pf~~~~~~~~~~~i~~~~ 722 (783)
+|+|||++........ ......+++.|+|||.+.+..++.++|||||||++|+|++ |..||...+.......+. ..
T Consensus 159 ~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~p~~~~~~~~~~~~~~-~~ 237 (277)
T cd05062 159 KIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGMSNEQVLRFVM-EG 237 (277)
T ss_pred EECCCCCccccCCcceeecCCCCccCHhhcChhHhhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHH-cC
Confidence 9999999875433211 1122345788999999999889999999999999999999 799998887766665543 22
Q ss_pred ccccCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHH
Q 003963 723 QRLEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLR 761 (783)
Q Consensus 723 ~~~~~~~~~s~~l~~LI~~cL~~dP~~RPsa~ell~~L~ 761 (783)
.....+..++..+.++|.+||+.+|.+||++.++++.|+
T Consensus 238 ~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~ 276 (277)
T cd05062 238 GLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIK 276 (277)
T ss_pred CcCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHhh
Confidence 344567788999999999999999999999999998875
No 130
>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase. Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription
Probab=100.00 E-value=2.9e-38 Score=351.50 Aligned_cols=256 Identities=23% Similarity=0.359 Sum_probs=209.7
Q ss_pred ceeEeeeeccCCcEEEEEEEEe-CCceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEeceeecCC-----ceE
Q 003963 506 DLTIGEQIGQGSCGTVYHAVWY-GSQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQ-----RLC 579 (783)
Q Consensus 506 ~y~i~~~LG~G~fG~Vy~a~~~-~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~-----~~~ 579 (783)
+|++.++||+|+||.||++.+. .++.||||++............+.+|+.+++.++||||+++++++.... .+|
T Consensus 1 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 80 (372)
T cd07853 1 DVEPDRPIGYGAFGVVWSVTDPRDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNVLSALDILQPPHIDPFEEIY 80 (372)
T ss_pred CCcccceeeeCCCEEEEEEEECCCCCEEEEEeccccccchHHHHHHHHHHHHHHhCCCCCcCCHhheecCCCccccceEE
Confidence 4788999999999999999975 4578999998655434445567889999999999999999999998776 789
Q ss_pred EEEEecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCcccccc
Q 003963 580 IVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHET 659 (783)
Q Consensus 580 lV~E~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~~~ 659 (783)
+||||+. ++|.+++.. ...+++..+..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||++......
T Consensus 81 lv~e~~~-~~l~~~~~~-~~~l~~~~~~~~~~qi~~aL~~LH~~~--ivH~dlkp~Nili~~~~~~kL~Dfg~a~~~~~~ 156 (372)
T cd07853 81 VVTELMQ-SDLHKIIVS-PQPLSSDHVKVFLYQILRGLKYLHSAG--ILHRDIKPGNLLVNSNCVLKICDFGLARVEEPD 156 (372)
T ss_pred EEeeccc-cCHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHhCC--eeCCCCChHHEEECCCCCEEeccccceeecccC
Confidence 9999995 588888765 346899999999999999999999998 999999999999999999999999998754332
Q ss_pred cc-cccCCCCCCcccCcccccCC-CCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhcccc--------------
Q 003963 660 YL-TTKTGKGTPQWMAPEVLRNE-PSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQ-------------- 723 (783)
Q Consensus 660 ~~-~~~~~~Gt~~Y~aPE~~~~~-~~s~~sDIwSLG~il~elltG~~Pf~~~~~~~~~~~i~~~~~-------------- 723 (783)
.. ......+++.|+|||++.+. .++.++|||||||++|+|++|++||...+....+..+.....
T Consensus 157 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~ 236 (372)
T cd07853 157 ESKHMTQEVVTQYYRAPEILMGSRHYTSAVDIWSVGCIFAELLGRRILFQAQSPIQQLDLITDLLGTPSLEAMRSACEGA 236 (372)
T ss_pred ccccCCCCCcCCCcCCHHHHcCCCCCCcHHHHHhHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHHhhHHH
Confidence 11 12234678999999999875 478999999999999999999999988776554433321100
Q ss_pred ----------------cccCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhcC
Q 003963 724 ----------------RLEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQAS 771 (783)
Q Consensus 724 ----------------~~~~~~~~s~~l~~LI~~cL~~dP~~RPsa~ell~~L~~L~~~~f~~~ 771 (783)
...+....++++.+||.+||+.||.+|||+.++ +.|+||+..
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~------l~hp~~~~~ 294 (372)
T cd07853 237 RAHILRGPHKPPSLPVLYTLSSQATHEAVHLLCRMLVFDPDKRISAADA------LAHPYLDEG 294 (372)
T ss_pred HHHHHhCCCCCCchHHhcccCCCCCHHHHHHHHHhCCCChhhCcCHHHH------hcCHhhCCC
Confidence 012234568899999999999999999999999 678998764
No 131
>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1. Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.
Probab=100.00 E-value=9.7e-38 Score=336.08 Aligned_cols=259 Identities=30% Similarity=0.572 Sum_probs=216.4
Q ss_pred ccceeEeeeeccCCcEEEEEEEEeCC---ceEEEEEEecccCCHHHHHHHHHHHHHHHhC-CCCceeeEeceeecCCceE
Q 003963 504 WEDLTIGEQIGQGSCGTVYHAVWYGS---QDVAVKVFSRQEYSDEVIHSFRQEVSLMKRL-RHPNVLLFMGAVTSPQRLC 579 (783)
Q Consensus 504 ~~~y~i~~~LG~G~fG~Vy~a~~~~~---~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l-~HpnIv~l~~~~~~~~~~~ 579 (783)
+++|++.+.||+|+||.||+|.+... ..+++|.++... .....+.+.+|+.++.++ +||||+++++++...+.++
T Consensus 1 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~~~-~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~ 79 (297)
T cd05089 1 WEDIKFEDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFA-SENDHRDFAGELEVLCKLGHHPNIINLLGACENRGYLY 79 (297)
T ss_pred CccceeeeeecCCCcceEEEEEecCCCCcceeEEEEccccC-CHHHHHHHHHHHHHHHhhcCCCchhheEEEEccCCcce
Confidence 46899999999999999999987543 247888876432 334456788999999999 7999999999999999999
Q ss_pred EEEEecCCCCHHHHHhhcC---------------CcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCc
Q 003963 580 IVTEFLPRGSLFRLLQRNT---------------TKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWT 644 (783)
Q Consensus 580 lV~E~~~ggsL~~~L~~~~---------------~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~ 644 (783)
++|||+++++|.+++.... ..+++..++.++.||+.||+|||+++ |+||||||+|||++.++.
T Consensus 80 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~~--ivH~dlkp~Nill~~~~~ 157 (297)
T cd05089 80 IAIEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLSEKQ--FIHRDLAARNVLVGENLA 157 (297)
T ss_pred EEEEecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHHHCC--cccCcCCcceEEECCCCe
Confidence 9999999999999996532 24788999999999999999999998 999999999999999999
Q ss_pred EEEEecCCCcccccccccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCChHHHHHHhhcccc
Q 003963 645 VKVGDFGLSRLKHETYLTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELAT-EKIPWDNLNSMQVIGAVGFMNQ 723 (783)
Q Consensus 645 vkL~DFGla~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~ellt-G~~Pf~~~~~~~~~~~i~~~~~ 723 (783)
+||+|||++....... .......+..|+|||++.+..++.++|||||||++|+|++ |..||...........+.. ..
T Consensus 158 ~kl~dfg~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~el~t~g~~pf~~~~~~~~~~~~~~-~~ 235 (297)
T cd05089 158 SKIADFGLSRGEEVYV-KKTMGRLPVRWMAIESLNYSVYTTKSDVWSFGVLLWEIVSLGGTPYCGMTCAELYEKLPQ-GY 235 (297)
T ss_pred EEECCcCCCcccccee-ccCCCCcCccccCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhc-CC
Confidence 9999999986433211 1112233567999999999889999999999999999997 9999988877766555432 23
Q ss_pred cccCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHH
Q 003963 724 RLEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQY 767 (783)
Q Consensus 724 ~~~~~~~~s~~l~~LI~~cL~~dP~~RPsa~ell~~L~~L~~~~ 767 (783)
....+..++..+.+||.+||..+|.+||++.++++.|+.+...+
T Consensus 236 ~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~~~~~ 279 (297)
T cd05089 236 RMEKPRNCDDEVYELMRQCWRDRPYERPPFAQISVQLSRMLEAR 279 (297)
T ss_pred CCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhh
Confidence 44566779999999999999999999999999999998887654
No 132
>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways
Probab=100.00 E-value=9.6e-39 Score=349.24 Aligned_cols=257 Identities=26% Similarity=0.387 Sum_probs=209.4
Q ss_pred eeeccCCcEEEEEEEEeC-CceEEEEEEecccCC-HHHHHHHHHHHHHHHhC-CCCceeeEeceeecCCceEEEEEecCC
Q 003963 511 EQIGQGSCGTVYHAVWYG-SQDVAVKVFSRQEYS-DEVIHSFRQEVSLMKRL-RHPNVLLFMGAVTSPQRLCIVTEFLPR 587 (783)
Q Consensus 511 ~~LG~G~fG~Vy~a~~~~-~~~vAiK~i~~~~~~-~~~~~~~~~Ei~il~~l-~HpnIv~l~~~~~~~~~~~lV~E~~~g 587 (783)
+.||+|+||.||+|.+.. ++.||+|++.+.... ......+.+|+.++..+ +||||+++++++...+.+|+||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (327)
T cd05617 1 RVIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGLHSCFQTTSRLFLVIEYVNG 80 (327)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcCCCCEeeEEEEEEeCCEEEEEEeCCCC
Confidence 469999999999999865 467999999875433 34456788899999888 599999999999999999999999999
Q ss_pred CCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCcccccccccccCCC
Q 003963 588 GSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETYLTTKTGK 667 (783)
Q Consensus 588 gsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~~ 667 (783)
++|..++... ..+++..++.++.||+.||+|||+++ |+||||||+|||++.++.+||+|||++.............+
T Consensus 81 ~~L~~~~~~~-~~l~~~~~~~~~~qi~~al~~lH~~~--ivHrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~ 157 (327)
T cd05617 81 GDLMFHMQRQ-RKLPEEHARFYAAEICIALNFLHERG--IIYRDLKLDNVLLDADGHIKLTDYGMCKEGLGPGDTTSTFC 157 (327)
T ss_pred CcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCC--eeccCCCHHHEEEeCCCCEEEeccccceeccCCCCceeccc
Confidence 9999988754 35999999999999999999999998 99999999999999999999999999875333333334567
Q ss_pred CCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCC------hHHHHHHhhcccccccCCCCCCHHHHHHHHH
Q 003963 668 GTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLN------SMQVIGAVGFMNQRLEIPKDVDPRWAAIVES 741 (783)
Q Consensus 668 Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~elltG~~Pf~~~~------~~~~~~~i~~~~~~~~~~~~~s~~l~~LI~~ 741 (783)
||+.|+|||++.+..++.++|||||||+||+|++|..||.... ........ .......+|..++..+.++|.+
T Consensus 158 gt~~y~aPE~~~~~~~~~~~DiwslGvil~ell~g~~pf~~~~~~~~~~~~~~~~~~-~~~~~~~~p~~~~~~~~~li~~ 236 (327)
T cd05617 158 GTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIITDNPDMNTEDYLFQV-ILEKPIRIPRFLSVKASHVLKG 236 (327)
T ss_pred CCcccCCHHHHCCCCCCchheeehhHHHHHHHHhCCCCCCccCCCcccccHHHHHHH-HHhCCCCCCCCCCHHHHHHHHH
Confidence 9999999999999999999999999999999999999995321 22222221 1234556788899999999999
Q ss_pred hhhhCCCCCCCHHHHHHHHHHHHHHHhhcC
Q 003963 742 CWHSDPQCRPSFQELVDKLRDLQRQYFQAS 771 (783)
Q Consensus 742 cL~~dP~~RPsa~ell~~L~~L~~~~f~~~ 771 (783)
||..||.+|+++......-+-+.|+||+.+
T Consensus 237 ~L~~dP~~R~~~~~~~~~~~i~~h~~f~~~ 266 (327)
T cd05617 237 FLNKDPKERLGCQPQTGFSDIKSHTFFRSI 266 (327)
T ss_pred HhccCHHHcCCCCCCCCHHHHHcCCCCCCC
Confidence 999999999985322111112678888654
No 133
>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.
Probab=100.00 E-value=1.1e-38 Score=347.63 Aligned_cols=252 Identities=30% Similarity=0.418 Sum_probs=207.2
Q ss_pred eeeccCCcEEEEEEEEeC-CceEEEEEEecccCC-HHHHHHHHHHH-HHHHhCCCCceeeEeceeecCCceEEEEEecCC
Q 003963 511 EQIGQGSCGTVYHAVWYG-SQDVAVKVFSRQEYS-DEVIHSFRQEV-SLMKRLRHPNVLLFMGAVTSPQRLCIVTEFLPR 587 (783)
Q Consensus 511 ~~LG~G~fG~Vy~a~~~~-~~~vAiK~i~~~~~~-~~~~~~~~~Ei-~il~~l~HpnIv~l~~~~~~~~~~~lV~E~~~g 587 (783)
++||+|+||.||+|.+.. ++.||+|++.+.... ......+..|. .+++.++||||+++++++...+.+|+|||||++
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~~~~ 80 (321)
T cd05603 1 KVIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHPFLVGLHYSFQTAEKLYFVLDYVNG 80 (321)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHhCCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 469999999999999865 467999999765432 22234445554 467889999999999999999999999999999
Q ss_pred CCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCcccccccccccCCC
Q 003963 588 GSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETYLTTKTGK 667 (783)
Q Consensus 588 gsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~~ 667 (783)
++|..++... ..+++..+..++.||+.||.|||+++ |+||||||+||||+.++.+||+|||++.............+
T Consensus 81 ~~L~~~l~~~-~~~~~~~~~~~~~qi~~~L~~lH~~~--ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~~ 157 (321)
T cd05603 81 GELFFHLQRE-RCFLEPRARFYAAEVASAIGYLHSLN--IIYRDLKPENILLDSQGHVVLTDFGLCKEGVEPEETTSTFC 157 (321)
T ss_pred CCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCC--eEeccCCHHHeEECCCCCEEEccCCCCccCCCCCCcccccc
Confidence 9999888753 45888899999999999999999998 99999999999999999999999999875433333334557
Q ss_pred CCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhcccccccCCCCCCHHHHHHHHHhhhhCC
Q 003963 668 GTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAAIVESCWHSDP 747 (783)
Q Consensus 668 Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~l~~LI~~cL~~dP 747 (783)
||+.|+|||++.+..++.++|||||||++|+|++|..||...+.......+. .....++...+..+.++|.+||++||
T Consensus 158 gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~--~~~~~~~~~~~~~~~~li~~~l~~~p 235 (321)
T cd05603 158 GTPEYLAPEVLRKEPYDRTVDWWCLGAVLYEMLYGLPPFYSRDVSQMYDNIL--HKPLQLPGGKTVAACDLLVGLLHKDQ 235 (321)
T ss_pred CCcccCCHHHhcCCCCCCcCcccccchhhhhhhcCCCCCCCCCHHHHHHHHh--cCCCCCCCCCCHHHHHHHHHHccCCH
Confidence 8999999999999999999999999999999999999999887766665553 34556777889999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHhh
Q 003963 748 QCRPSFQELVDKLRDLQRQYFQ 769 (783)
Q Consensus 748 ~~RPsa~ell~~L~~L~~~~f~ 769 (783)
.+||++..-+ ++-+.|+||+
T Consensus 236 ~~R~~~~~~~--~~~~~~~~~~ 255 (321)
T cd05603 236 RRRLGAKADF--LEIKNHVFFS 255 (321)
T ss_pred hhcCCCCCCH--HHHhCCCCcC
Confidence 9999764221 1225666664
No 134
>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=6.3e-39 Score=334.59 Aligned_cols=257 Identities=25% Similarity=0.329 Sum_probs=212.3
Q ss_pred ccceeEeeeeccCCcEEEEEEEEeC-CceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEeceeec-----CCc
Q 003963 504 WEDLTIGEQIGQGSCGTVYHAVWYG-SQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTS-----PQR 577 (783)
Q Consensus 504 ~~~y~i~~~LG~G~fG~Vy~a~~~~-~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~-----~~~ 577 (783)
...|..++.||+|+||.|+.+.++. ++.||||++.......-..++..+|+.+|+.++|+||+.+++++.. -+.
T Consensus 21 ~~~y~~~~~iG~GAyGvVcsA~~~~t~~~VAIKKi~~~F~~~~~akRtlRElklLr~~~HeNIi~l~di~~p~~~~~f~D 100 (359)
T KOG0660|consen 21 PRYYVLIEPIGRGAYGVVCSAKDKRTGEKVAIKKILNPFENQIDAKRTLRELKLLRHLRHENIIGLLDIFRPPSRDKFND 100 (359)
T ss_pred cceecccccccCcceeeEEEEEEcCCCCEeehhhhhhhhhchHHHHHHHHHHHHHHHhcCCCcceEEeecccccccccce
Confidence 3566668999999999999999865 4679999998665566667888899999999999999999998865 245
Q ss_pred eEEEEEecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCcccc
Q 003963 578 LCIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKH 657 (783)
Q Consensus 578 ~~lV~E~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~ 657 (783)
+|+|+|+| +.+|..+++.. ..++...+..+++||++||.|+|+.+ |+||||||.|+|++.+..+||||||+|+...
T Consensus 101 vYiV~elM-etDL~~iik~~-~~L~d~H~q~f~YQiLrgLKyiHSAn--ViHRDLKPsNll~n~~c~lKI~DFGLAR~~~ 176 (359)
T KOG0660|consen 101 VYLVFELM-ETDLHQIIKSQ-QDLTDDHAQYFLYQILRGLKYIHSAN--VIHRDLKPSNLLLNADCDLKICDFGLARYLD 176 (359)
T ss_pred eEEehhHH-hhHHHHHHHcC-ccccHHHHHHHHHHHHHhcchhhccc--ccccccchhheeeccCCCEEeccccceeecc
Confidence 89999999 66999999764 34999999999999999999999999 9999999999999999999999999999775
Q ss_pred cc--cccccCCCCCCcccCccccc-CCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhcccc-----------
Q 003963 658 ET--YLTTKTGKGTPQWMAPEVLR-NEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQ----------- 723 (783)
Q Consensus 658 ~~--~~~~~~~~Gt~~Y~aPE~~~-~~~~s~~sDIwSLG~il~elltG~~Pf~~~~~~~~~~~i~~~~~----------- 723 (783)
.. .......+-|..|+|||++. ...|+.+.||||+||+|.||++|++-|.+.+....+..+....+
T Consensus 177 ~~~~~~~mTeYVaTRWYRAPElll~~~~Yt~aiDiWSvGCI~AEmL~gkplFpG~d~v~Ql~lI~~~lGtP~~e~l~~i~ 256 (359)
T KOG0660|consen 177 KFFEDGFMTEYVATRWYRAPELLLNSSEYTKAIDIWSVGCILAEMLTGKPLFPGKDYVHQLQLILELLGTPSEEDLQKIR 256 (359)
T ss_pred ccCcccchhcceeeeeecCHHHHhccccccchhhhhhhhHHHHHHHcCCCCCCCCchHHHHHHHHHhcCCCCHHHHHHhc
Confidence 32 11112346799999999865 56689999999999999999999999988776554433211110
Q ss_pred ----------ccc--------CCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhc
Q 003963 724 ----------RLE--------IPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQA 770 (783)
Q Consensus 724 ----------~~~--------~~~~~s~~l~~LI~~cL~~dP~~RPsa~ell~~L~~L~~~~f~~ 770 (783)
.+. +.+..++.+.+|+.+||..||.+|+|+.|. |.|+|+..
T Consensus 257 s~~ar~yi~slp~~p~~~f~~~fp~a~p~AidLlekmL~fdP~kRita~eA------L~hPYl~~ 315 (359)
T KOG0660|consen 257 SEKARPYIKSLPQIPKQPFSSIFPNANPLAIDLLEKMLVFDPKKRITAEEA------LAHPYLAP 315 (359)
T ss_pred cHHHHHHHHhCCCCCCCCHHHHcCCCCHHHHHHHHHHhccCccccCCHHHH------hcChhhhh
Confidence 111 124678999999999999999999999999 78898843
No 135
>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity. Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....
Probab=100.00 E-value=1.1e-38 Score=334.66 Aligned_cols=253 Identities=33% Similarity=0.539 Sum_probs=211.9
Q ss_pred eeEeeeeccCCcEEEEEEEEeCC-ceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEeceeecCCceEEEEEec
Q 003963 507 LTIGEQIGQGSCGTVYHAVWYGS-QDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIVTEFL 585 (783)
Q Consensus 507 y~i~~~LG~G~fG~Vy~a~~~~~-~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lV~E~~ 585 (783)
|+++++||+|+||.||++.+... +.||+|++..............+|+.+++.++||||+++++++......++||||+
T Consensus 1 y~~~~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~v~~~~ 80 (260)
T PF00069_consen 1 YRLVKKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEIEEEEREENIREIKILRRLRHPNIVQILDVFQDDNYLYIVMEYC 80 (260)
T ss_dssp EEEEEEEEEESSEEEEEEEETTTTEEEEEEEEESTTHHHHHHHHHHHHHHHHHHHTBTTBCHEEEEEEESSEEEEEEEEE
T ss_pred CEEeEEEEeCCCEEEEEEEECCCCeEEEEEEeccccccccccchhhhhhhcccccccccccccccccccccccccccccc
Confidence 78999999999999999998765 47999999887655555555567999999999999999999999999999999999
Q ss_pred CCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCcccccccccccC
Q 003963 586 PRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETYLTTKT 665 (783)
Q Consensus 586 ~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~~~~~~ 665 (783)
.+++|.+++.. ...+++..++.++.||+.||.+||+++ |+|+||||+|||++.++.++|+|||.+............
T Consensus 81 ~~~~L~~~l~~-~~~~~~~~~~~~~~qi~~~L~~Lh~~~--i~H~dikp~NIl~~~~~~~~l~Dfg~~~~~~~~~~~~~~ 157 (260)
T PF00069_consen 81 PGGSLQDYLQK-NKPLSEEEILKIAYQILEALAYLHSKG--IVHRDIKPENILLDENGEVKLIDFGSSVKLSENNENFNP 157 (260)
T ss_dssp TTEBHHHHHHH-HSSBBHHHHHHHHHHHHHHHHHHHHTT--EEESSBSGGGEEESTTSEEEESSGTTTEESTSTTSEBSS
T ss_pred ccccccccccc-ccccccccccccccccccccccccccc--ccccccccccccccccccccccccccccccccccccccc
Confidence 99999999983 446899999999999999999999998 999999999999999999999999998754333334445
Q ss_pred CCCCCcccCccccc-CCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccc---c--cccCCCCCCHHHHHHH
Q 003963 666 GKGTPQWMAPEVLR-NEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMN---Q--RLEIPKDVDPRWAAIV 739 (783)
Q Consensus 666 ~~Gt~~Y~aPE~~~-~~~~s~~sDIwSLG~il~elltG~~Pf~~~~~~~~~~~i~~~~---~--~~~~~~~~s~~l~~LI 739 (783)
..+++.|+|||++. +...+.++||||||+++|+|++|..||...........+.... . ........+..+.++|
T Consensus 158 ~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 237 (260)
T PF00069_consen 158 FVGTPEYMAPEVLQQGKKYTRKSDIWSLGIILYELLTGKLPFEESNSDDQLEIIEKILKRPLPSSSQQSREKSEELRDLI 237 (260)
T ss_dssp SSSSGGGSCHHHHTTTSSBSTHHHHHHHHHHHHHHHHSSSSSTTSSHHHHHHHHHHHHHTHHHHHTTSHTTSHHHHHHHH
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccchhhhhhhhhcccccccccccccchhHHHHHHHH
Confidence 67899999999998 8888999999999999999999999999874333222221111 1 1111122348999999
Q ss_pred HHhhhhCCCCCCCHHHHHHHHHHHHHHHh
Q 003963 740 ESCWHSDPQCRPSFQELVDKLRDLQRQYF 768 (783)
Q Consensus 740 ~~cL~~dP~~RPsa~ell~~L~~L~~~~f 768 (783)
.+||+.||++||++.++ ++|+||
T Consensus 238 ~~~l~~~p~~R~~~~~l------~~~~~~ 260 (260)
T PF00069_consen 238 KKMLSKDPEQRPSAEEL------LKHPWF 260 (260)
T ss_dssp HHHSSSSGGGSTTHHHH------HTSGGG
T ss_pred HHHccCChhHCcCHHHH------hcCCCC
Confidence 99999999999999999 677876
No 136
>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src. Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo
Probab=100.00 E-value=1.1e-37 Score=329.27 Aligned_cols=256 Identities=34% Similarity=0.593 Sum_probs=214.9
Q ss_pred cccccceeEeeeeccCCcEEEEEEEEeCCceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEeceeecCCceEE
Q 003963 501 EILWEDLTIGEQIGQGSCGTVYHAVWYGSQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCI 580 (783)
Q Consensus 501 e~~~~~y~i~~~LG~G~fG~Vy~a~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~l 580 (783)
++..++|++.++||+|+||.||+|.+..+..||+|++....... ..+.+|+.+++.++||||+++++++. ....++
T Consensus 2 ~~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~valK~~~~~~~~~---~~~~~E~~~l~~l~~~~i~~~~~~~~-~~~~~l 77 (262)
T cd05071 2 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSP---EAFLQEAQVMKKLRHEKLVQLYAVVS-EEPIYI 77 (262)
T ss_pred CCChHHeeEeeecCCCCCCcEEEEEecCCceEEEEecccCccCH---HHHHHHHHHHHhCCCCCcceEEEEEC-CCCcEE
Confidence 45567899999999999999999998777789999987644333 46788999999999999999999875 456899
Q ss_pred EEEecCCCCHHHHHhhc-CCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCcccccc
Q 003963 581 VTEFLPRGSLFRLLQRN-TTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHET 659 (783)
Q Consensus 581 V~E~~~ggsL~~~L~~~-~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~~~ 659 (783)
||||+++++|.+++... ...+++..++.++.|++.||+|||+.+ |+|+||||+||+++.++.++|+|||++......
T Consensus 78 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~--i~H~dl~p~Nill~~~~~~~L~dfg~~~~~~~~ 155 (262)
T cd05071 78 VTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMN--YVHRDLRAANILVGENLVCKVADFGLARLIEDN 155 (262)
T ss_pred EEEcCCCCcHHHHHhhccccCCCHHHHHHHHHHHHHHHHHHHHCC--ccccccCcccEEEcCCCcEEeccCCceeecccc
Confidence 99999999999999753 345788999999999999999999988 999999999999999999999999998765433
Q ss_pred ccc-ccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCChHHHHHHhhcccccccCCCCCCHHHHH
Q 003963 660 YLT-TKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELAT-EKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAA 737 (783)
Q Consensus 660 ~~~-~~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~l~~ 737 (783)
... .....++..|+|||++.+..++.++|||||||++|+|++ |..||......+....+.. ......+..++..+.+
T Consensus 156 ~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~ellt~g~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~ 234 (262)
T cd05071 156 EYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVER-GYRMPCPPECPESLHD 234 (262)
T ss_pred ccccccCCcccceecCHhHhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCChHHHHHHHhc-CCCCCCccccCHHHHH
Confidence 221 122345678999999988889999999999999999999 8999988776665554432 2234445678999999
Q ss_pred HHHHhhhhCCCCCCCHHHHHHHHHHH
Q 003963 738 IVESCWHSDPQCRPSFQELVDKLRDL 763 (783)
Q Consensus 738 LI~~cL~~dP~~RPsa~ell~~L~~L 763 (783)
||.+||+++|.+||++.++++.|+++
T Consensus 235 li~~~l~~~p~~Rp~~~~~~~~l~~~ 260 (262)
T cd05071 235 LMCQCWRKEPEERPTFEYLQAFLEDY 260 (262)
T ss_pred HHHHHccCCcccCCCHHHHHHHHHHh
Confidence 99999999999999999999887653
No 137
>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological
Probab=100.00 E-value=8.1e-38 Score=332.04 Aligned_cols=258 Identities=34% Similarity=0.582 Sum_probs=218.9
Q ss_pred ccccccceeEeeeeccCCcEEEEEEEEeCC------ceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEeceee
Q 003963 500 YEILWEDLTIGEQIGQGSCGTVYHAVWYGS------QDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVT 573 (783)
Q Consensus 500 ~e~~~~~y~i~~~LG~G~fG~Vy~a~~~~~------~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~ 573 (783)
|++..++|++.+.||+|+||.||++.+... ..||+|.+.... .......+.+|+.+++.++||||+++++++.
T Consensus 1 ~~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~-~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~ 79 (277)
T cd05032 1 WELPREKITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENA-SMRERIEFLNEASVMKEFNCHHVVRLLGVVS 79 (277)
T ss_pred CccchHHeeEEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCcc-CHHHHHHHHHHHHHHHhCCCCceeEEEEEEc
Confidence 456678999999999999999999987532 469999976543 3334567889999999999999999999999
Q ss_pred cCCceEEEEEecCCCCHHHHHhhcC---------CcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCc
Q 003963 574 SPQRLCIVTEFLPRGSLFRLLQRNT---------TKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWT 644 (783)
Q Consensus 574 ~~~~~~lV~E~~~ggsL~~~L~~~~---------~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~ 644 (783)
.....++||||+++++|.+++.... ..+++..++.++.||+.||.|||+.+ |+|+||||+|||++.++.
T Consensus 80 ~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~--i~H~di~p~nill~~~~~ 157 (277)
T cd05032 80 TGQPTLVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLAAKK--FVHRDLAARNCMVAEDLT 157 (277)
T ss_pred CCCCcEEEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCC--ccccccChheEEEcCCCC
Confidence 9999999999999999999986422 23678889999999999999999988 999999999999999999
Q ss_pred EEEEecCCCccccccc--ccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCChHHHHHHhhcc
Q 003963 645 VKVGDFGLSRLKHETY--LTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELAT-EKIPWDNLNSMQVIGAVGFM 721 (783)
Q Consensus 645 vkL~DFGla~~~~~~~--~~~~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~ellt-G~~Pf~~~~~~~~~~~i~~~ 721 (783)
+||+|||+++...... .......++..|+|||.+.+..++.++|||||||++|+|++ |..||...+..+....+. .
T Consensus 158 ~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~-~ 236 (277)
T cd05032 158 VKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTKSDVWSFGVVLWEMATLAEQPYQGLSNEEVLKFVI-D 236 (277)
T ss_pred EEECCcccchhhccCcccccCCCCCccccccCHHHHhcCCCCcccchHHHHHHHHHhhccCCCCCccCCHHHHHHHHh-c
Confidence 9999999987544322 12223456789999999988889999999999999999998 999998888777666554 3
Q ss_pred cccccCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHH
Q 003963 722 NQRLEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLR 761 (783)
Q Consensus 722 ~~~~~~~~~~s~~l~~LI~~cL~~dP~~RPsa~ell~~L~ 761 (783)
.....+|..++.++.+||.+||..+|++|||+.+++..|+
T Consensus 237 ~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~ 276 (277)
T cd05032 237 GGHLDLPENCPDKLLELMRMCWQYNPKMRPTFLEIVSSLK 276 (277)
T ss_pred CCCCCCCCCCCHHHHHHHHHHcCCChhhCCCHHHHHHHhc
Confidence 3455677888999999999999999999999999998875
No 138
>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc
Probab=100.00 E-value=1.2e-37 Score=326.25 Aligned_cols=250 Identities=28% Similarity=0.430 Sum_probs=217.1
Q ss_pred ceeEeeeeccCCcEEEEEEEEeC-CceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEeceeecCCceEEEEEe
Q 003963 506 DLTIGEQIGQGSCGTVYHAVWYG-SQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIVTEF 584 (783)
Q Consensus 506 ~y~i~~~LG~G~fG~Vy~a~~~~-~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lV~E~ 584 (783)
+|.+.+.||+|+||.||++.+.. ++.|++|.+............+.+|+.+++.++||||+++++++...+..|+||||
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 80 (256)
T cd08529 1 DFEILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMNRREREEAIDEARVLAKLDSSYIIRYYESFLDKGKLNIVMEY 80 (256)
T ss_pred CceEeEEecCCCCeEEEEEEEcCCCcEEEEEEeehhhCCHHHHHHHHHHHHHHHhcCCCCeehheeeeccCCEEEEEEEe
Confidence 58889999999999999999864 56799999877665566667889999999999999999999999999999999999
Q ss_pred cCCCCHHHHHhhc-CCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCcccccccccc
Q 003963 585 LPRGSLFRLLQRN-TTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETYLTT 663 (783)
Q Consensus 585 ~~ggsL~~~L~~~-~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~~~~ 663 (783)
+++++|.+++... ...+++..++.++.|++.||.|||+.+ |+|+||||+||+++.++.++|+|||++..........
T Consensus 81 ~~~~~L~~~l~~~~~~~~~~~~~~~i~~~l~~al~~lH~~~--i~h~dl~~~nili~~~~~~~l~df~~~~~~~~~~~~~ 158 (256)
T cd08529 81 AENGDLHKLLKMQRGRPLPEDQVWRFFIQILLGLAHLHSKK--ILHRDIKSLNLFLDAYDNVKIGDLGVAKLLSDNTNFA 158 (256)
T ss_pred CCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC--cccCCCCcceEEEeCCCCEEEcccccceeccCccchh
Confidence 9999999999764 456889999999999999999999988 9999999999999999999999999987665543333
Q ss_pred cCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhcccccccCCCCCCHHHHHHHHHhh
Q 003963 664 KTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAAIVESCW 743 (783)
Q Consensus 664 ~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~l~~LI~~cL 743 (783)
....|++.|+|||++.+..++.++|+|||||++|+|++|+.||...+.......+. ......++..++..+.++|.+||
T Consensus 159 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~i~~~l 237 (256)
T cd08529 159 NTIVGTPYYLSPELCEDKPYNEKSDVWALGVVLYECCTGKHPFDANNQGALILKII-RGVFPPVSQMYSQQLAQLIDQCL 237 (256)
T ss_pred hccccCccccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH-cCCCCCCccccCHHHHHHHHHHc
Confidence 44568899999999999989999999999999999999999998877655544432 22234455578899999999999
Q ss_pred hhCCCCCCCHHHHHH
Q 003963 744 HSDPQCRPSFQELVD 758 (783)
Q Consensus 744 ~~dP~~RPsa~ell~ 758 (783)
+.+|++||++.++++
T Consensus 238 ~~~p~~Rp~~~~ll~ 252 (256)
T cd08529 238 TKDYRQRPDTFQLLR 252 (256)
T ss_pred cCCcccCcCHHHHhh
Confidence 999999999999954
No 139
>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.
Probab=100.00 E-value=1.8e-38 Score=347.61 Aligned_cols=258 Identities=20% Similarity=0.354 Sum_probs=213.3
Q ss_pred cceeEeeeeccCCcEEEEEEEEeC-CceEEEEEEecccC-CHHHHHHHHHHHHHHHhCCCCceeeEeceeecCCceEEEE
Q 003963 505 EDLTIGEQIGQGSCGTVYHAVWYG-SQDVAVKVFSRQEY-SDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIVT 582 (783)
Q Consensus 505 ~~y~i~~~LG~G~fG~Vy~a~~~~-~~~vAiK~i~~~~~-~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lV~ 582 (783)
++|++.+.||+|+||.||++.+.. ++.||+|++.+... .......+.+|+.++..++|+||+++++++...+..|+||
T Consensus 1 d~y~i~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~l~~~~~~~~~~~lv~ 80 (331)
T cd05624 1 DDFEIIKVIGRGAFGEVAVVKMKHTERIYAMKILNKWEMLKRAETACFREERNVLVNGDCQWITTLHYAFQDENYLYLVM 80 (331)
T ss_pred CCceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEE
Confidence 479999999999999999999865 46799999876432 2233456788999999999999999999999999999999
Q ss_pred EecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCcccccccc-
Q 003963 583 EFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETYL- 661 (783)
Q Consensus 583 E~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~~- 661 (783)
||++||+|.+++......+++..+..++.||+.||+|||+++ |+||||||+|||++.++.+||+|||++........
T Consensus 81 Ey~~gg~L~~~l~~~~~~l~~~~~~~~~~qi~~~L~~lH~~~--iiHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~ 158 (331)
T cd05624 81 DYYVGGDLLTLLSKFEDRLPEDMARFYIAEMVLAIHSIHQLH--YVHRDIKPDNVLLDMNGHIRLADFGSCLKMNQDGTV 158 (331)
T ss_pred eCCCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC--eeeccCchHHEEEcCCCCEEEEeccceeeccCCCce
Confidence 999999999999875567899999999999999999999998 99999999999999999999999999876543221
Q ss_pred cccCCCCCCcccCcccccC-----CCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhcccccccCCC---CCCH
Q 003963 662 TTKTGKGTPQWMAPEVLRN-----EPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLEIPK---DVDP 733 (783)
Q Consensus 662 ~~~~~~Gt~~Y~aPE~~~~-----~~~s~~sDIwSLG~il~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~---~~s~ 733 (783)
.....+||+.|+|||++.+ ..++.++|||||||+||+|++|+.||...+..+.+..+........+|. .++.
T Consensus 159 ~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~~~ 238 (331)
T cd05624 159 QSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHEERFQFPSHITDVSE 238 (331)
T ss_pred eeccccCCcccCCHHHHhccccCCCCCCCcccEEeeehhhhhhhhCCCCccCCCHHHHHHHHHcCCCcccCCCccccCCH
Confidence 2223568999999999876 4578899999999999999999999988877766665543333344443 4689
Q ss_pred HHHHHHHHhhhhCCCC--CCCHHHHHHHHHHHHHHHhhc
Q 003963 734 RWAAIVESCWHSDPQC--RPSFQELVDKLRDLQRQYFQA 770 (783)
Q Consensus 734 ~l~~LI~~cL~~dP~~--RPsa~ell~~L~~L~~~~f~~ 770 (783)
++.+||.+||..++.+ |+++.++ +.|+||+.
T Consensus 239 ~~~~li~~ll~~~~~~~~~~~~~~~------~~h~~f~~ 271 (331)
T cd05624 239 EAKDLIQRLICSRERRLGQNGIEDF------KKHAFFEG 271 (331)
T ss_pred HHHHHHHHHccCchhhcCCCCHHHH------hcCCCcCC
Confidence 9999999999866544 4688888 56777754
No 140
>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.
Probab=100.00 E-value=1.2e-37 Score=326.69 Aligned_cols=254 Identities=27% Similarity=0.450 Sum_probs=215.5
Q ss_pred ceeEeeeeccCCcEEEEEEEEeC-CceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEeceeec-CCceEEEEE
Q 003963 506 DLTIGEQIGQGSCGTVYHAVWYG-SQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTS-PQRLCIVTE 583 (783)
Q Consensus 506 ~y~i~~~LG~G~fG~Vy~a~~~~-~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~-~~~~~lV~E 583 (783)
.|++.+.||.|+||.||++.+.. ++.||+|++............+.+|+.+++.++|+||+++++.+.. +..+|++||
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e 80 (257)
T cd08223 1 AYCFVRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNASRRERKAAEQEAQLLSQLKHPNIVAYRESWEGEDGLLYIVMG 80 (257)
T ss_pred CceEEEEecCCCCeEEEEEEEcCCCcEEEEEEEehhhcCHHHHHHHHHHHHHHHhCCCCCeeeeeeeecCCCCEEEEEec
Confidence 48999999999999999999765 4679999997766555566778899999999999999999998764 446899999
Q ss_pred ecCCCCHHHHHhhc-CCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCccccccccc
Q 003963 584 FLPRGSLFRLLQRN-TTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETYLT 662 (783)
Q Consensus 584 ~~~ggsL~~~L~~~-~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~~~ 662 (783)
|+++++|.+++... ...+++..++.++.+++.||.+||+.+ |+|+||||+||+++.++.++|+|||++.........
T Consensus 81 ~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~l~~~l~~lH~~~--i~H~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~ 158 (257)
T cd08223 81 FCEGGDLYHKLKEQKGKLLPENQVVEWFVQIAMALQYLHEKH--ILHRDLKTQNVFLTRTNIIKVGDLGIARVLENQCDM 158 (257)
T ss_pred ccCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCC--eeccCCCchhEEEecCCcEEEecccceEEecccCCc
Confidence 99999999999753 345899999999999999999999998 999999999999999999999999998765443333
Q ss_pred ccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhcccccccCCCCCCHHHHHHHHHh
Q 003963 663 TKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAAIVESC 742 (783)
Q Consensus 663 ~~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~l~~LI~~c 742 (783)
.....+++.|+|||++.+..++.++|||||||++|+|++|+.||...+.......+.. ......+..+++++.+||.+|
T Consensus 159 ~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~li~~~ 237 (257)
T cd08223 159 ASTLIGTPYYMSPELFSNKPYNYKSDVWALGCCVYEMATLKHAFNAKDMNSLVYRIIE-GKLPPMPKDYSPELGELIATM 237 (257)
T ss_pred cccccCCcCccChhHhcCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHh-cCCCCCccccCHHHHHHHHHH
Confidence 3455689999999999999999999999999999999999999987766554443321 223345677899999999999
Q ss_pred hhhCCCCCCCHHHHHHHHHHHHHHHh
Q 003963 743 WHSDPQCRPSFQELVDKLRDLQRQYF 768 (783)
Q Consensus 743 L~~dP~~RPsa~ell~~L~~L~~~~f 768 (783)
|..+|.+||++.++ ++|+||
T Consensus 238 l~~~p~~Rp~~~~~------l~~~~~ 257 (257)
T cd08223 238 LSKRPEKRPSVKSI------LRQPYI 257 (257)
T ss_pred hccCcccCCCHHHH------hcCCCC
Confidence 99999999999999 556664
No 141
>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=100.00 E-value=1.2e-37 Score=332.51 Aligned_cols=256 Identities=31% Similarity=0.573 Sum_probs=214.6
Q ss_pred cccceeEeeeeccCCcEEEEEEEEe-----CCceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEeceeecCCc
Q 003963 503 LWEDLTIGEQIGQGSCGTVYHAVWY-----GSQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQR 577 (783)
Q Consensus 503 ~~~~y~i~~~LG~G~fG~Vy~a~~~-----~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~ 577 (783)
.+.+|++.++||+|+||.||+|.+. ....|++|.+.... .......+.+|+.+++.++||||+++++++.....
T Consensus 3 ~~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~ 81 (283)
T cd05090 3 PLSAVRFMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDIN-NPQQWGEFQQEASLMAELHHPNIVCLLGVVTQEQP 81 (283)
T ss_pred ChhhceeeeeccccCCcceEEEEEecCCCCCcceEEEEeccCCC-CHHHHHHHHHHHHHHhhCCCCCeeeEEEEEecCCc
Confidence 3568999999999999999999853 23569999987543 33445678899999999999999999999999999
Q ss_pred eEEEEEecCCCCHHHHHhhc----------------CCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcC
Q 003963 578 LCIVTEFLPRGSLFRLLQRN----------------TTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDK 641 (783)
Q Consensus 578 ~~lV~E~~~ggsL~~~L~~~----------------~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~ 641 (783)
.|+||||+++++|.+++... ...+++..++.++.||+.||.|||+++ |+|+||||+|||++.
T Consensus 82 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~--i~H~dlkp~nili~~ 159 (283)
T cd05090 82 VCMLFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLSSHF--FVHKDLAARNILIGE 159 (283)
T ss_pred eEEEEEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHhcC--eehhccccceEEEcC
Confidence 99999999999999998532 124778889999999999999999998 999999999999999
Q ss_pred CCcEEEEecCCCccccccc--ccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCChHHHHHHh
Q 003963 642 HWTVKVGDFGLSRLKHETY--LTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELAT-EKIPWDNLNSMQVIGAV 718 (783)
Q Consensus 642 ~~~vkL~DFGla~~~~~~~--~~~~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~ellt-G~~Pf~~~~~~~~~~~i 718 (783)
++.+||+|||+++...... .......++..|+|||.+.+..++.++|||||||++|+|++ |..||...........+
T Consensus 160 ~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~g~~p~~~~~~~~~~~~~ 239 (283)
T cd05090 160 QLHVKISDLGLSREIYSADYYRVQPKSLLPIRWMPPEAIMYGKFSSDSDIWSFGVVLWEIFSFGLQPYYGFSNQEVIEMV 239 (283)
T ss_pred CCcEEeccccccccccCCcceecccCCCccceecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH
Confidence 9999999999987543221 12223345778999999998889999999999999999998 99999887765555444
Q ss_pred hcccccccCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHH
Q 003963 719 GFMNQRLEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRD 762 (783)
Q Consensus 719 ~~~~~~~~~~~~~s~~l~~LI~~cL~~dP~~RPsa~ell~~L~~ 762 (783)
. .......+..+++.+.++|.+||+.||.+||++.++++.|+.
T Consensus 240 ~-~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~~ 282 (283)
T cd05090 240 R-KRQLLPCSEDCPPRMYSLMTECWQEGPSRRPRFKDIHTRLRS 282 (283)
T ss_pred H-cCCcCCCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHHhhc
Confidence 3 233455677889999999999999999999999999988764
No 142
>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr
Probab=100.00 E-value=4.5e-38 Score=335.42 Aligned_cols=252 Identities=21% Similarity=0.348 Sum_probs=205.4
Q ss_pred eccCCcEEEEEEEEeC-CceEEEEEEecccCCH-HHHHHHHHHHHHHHhCCCCceeeEeceeecCCceEEEEEecCCCCH
Q 003963 513 IGQGSCGTVYHAVWYG-SQDVAVKVFSRQEYSD-EVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIVTEFLPRGSL 590 (783)
Q Consensus 513 LG~G~fG~Vy~a~~~~-~~~vAiK~i~~~~~~~-~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lV~E~~~ggsL 590 (783)
||+|+||.||++.+.. ++.||+|++....... .....+..|+++++.++||||+++++++..+..+|+||||+++++|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l~hp~i~~~~~~~~~~~~~~lv~e~~~g~~L 80 (277)
T cd05607 1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVNSPFIVNLAYAFESKTHLCLVMSLMNGGDL 80 (277)
T ss_pred CCCCCceEEEEEEEccCCcEEEEEEEcHHHhhcchhhHHHHHHHHHHHhcCCCcEEEEEEEEecCCeEEEEEecCCCCCH
Confidence 7999999999998764 5789999987543322 2234456799999999999999999999999999999999999999
Q ss_pred HHHHhhc-CCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCcccccccccccCCCCC
Q 003963 591 FRLLQRN-TTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETYLTTKTGKGT 669 (783)
Q Consensus 591 ~~~L~~~-~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~~Gt 669 (783)
.+++... ...+++..++.++.||+.||+|||+.+ |+||||||+|||++.++.++|+|||++....... ......|+
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~--ivH~dikp~Nili~~~~~~~l~Dfg~~~~~~~~~-~~~~~~~~ 157 (277)
T cd05607 81 KYHIYNVGERGLEMERVIHYSAQITCGILHLHSMD--IVYRDMKPENVLLDDQGNCRLSDLGLAVELKDGK-TITQRAGT 157 (277)
T ss_pred HHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHCC--EEEccCChHhEEEcCCCCEEEeeceeeeecCCCc-eeeccCCC
Confidence 9887543 345889999999999999999999998 9999999999999999999999999987654432 22244689
Q ss_pred CcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChH----HHHHHhhccccccc-CCCCCCHHHHHHHHHhhh
Q 003963 670 PQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSM----QVIGAVGFMNQRLE-IPKDVDPRWAAIVESCWH 744 (783)
Q Consensus 670 ~~Y~aPE~~~~~~~s~~sDIwSLG~il~elltG~~Pf~~~~~~----~~~~~i~~~~~~~~-~~~~~s~~l~~LI~~cL~ 744 (783)
..|+|||++.+..++.++|||||||++|+|++|..||...... ...... ...... ....+++++.+||.+||+
T Consensus 158 ~~y~aPE~~~~~~~~~~~DvwslGv~l~el~~g~~p~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~li~~~L~ 235 (277)
T cd05607 158 NGYMAPEILKEEPYSYPVDWFAMGCSIYEMVAGRTPFKDHKEKVAKEELKRRT--LEDEVKFEHQNFTEESKDICRLFLA 235 (277)
T ss_pred CCccCHHHHccCCCCCchhHHHHHHHHHHHHhCCCCCCCCcchhhHHHHHHHh--hccccccccccCCHHHHHHHHHHhc
Confidence 9999999999988999999999999999999999999765332 121111 111111 224689999999999999
Q ss_pred hCCCCCCCHHHHHHHHHHHHHHHhhcC
Q 003963 745 SDPQCRPSFQELVDKLRDLQRQYFQAS 771 (783)
Q Consensus 745 ~dP~~RPsa~ell~~L~~L~~~~f~~~ 771 (783)
.||.+||++.++++.+ +.|+||+..
T Consensus 236 ~~P~~R~~~~~~~~~~--~~h~~f~~~ 260 (277)
T cd05607 236 KKPEDRLGSREKNDDP--RKHEFFKTI 260 (277)
T ss_pred cCHhhCCCCccchhhh--hcChhhcCC
Confidence 9999999998776544 579999764
No 143
>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]
Probab=100.00 E-value=6.6e-39 Score=317.78 Aligned_cols=262 Identities=23% Similarity=0.333 Sum_probs=212.7
Q ss_pred cccccceeEeeeeccCCcEEEEEEEEeC-CceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEeceeecCC---
Q 003963 501 EILWEDLTIGEQIGQGSCGTVYHAVWYG-SQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQ--- 576 (783)
Q Consensus 501 e~~~~~y~i~~~LG~G~fG~Vy~a~~~~-~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~--- 576 (783)
.+..++|++.+.||+|||+.||++.... .+-||+|++.... .+..+..++|++..+.++||||++++++.....
T Consensus 17 ~In~~Ryri~~~LgeGGfsfv~LV~~~s~~~~YAlKkI~c~~--~~~~e~~~rEid~~rkf~s~~vl~l~dh~l~~~~D~ 94 (302)
T KOG2345|consen 17 IINNKRYRIQRLLGEGGFSFVDLVKGLSTGHLYALKKILCHS--QEDIEEALREIDNHRKFNSPNVLRLVDHQLREEKDG 94 (302)
T ss_pred EEcCceEEEeeeecCCCceeeeeecccCcccchhhheeeccc--hHHHHHHHHHHHHHHhhCCcchHHHHHHHHHhhccC
Confidence 4566899999999999999999998654 4569999987655 344577889999999999999999999875443
Q ss_pred --ceEEEEEecCCCCHHHHHhh---cCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecC
Q 003963 577 --RLCIVTEFLPRGSLFRLLQR---NTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFG 651 (783)
Q Consensus 577 --~~~lV~E~~~ggsL~~~L~~---~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFG 651 (783)
..||+++|...|+|.+.++. .+..+++.+++.|+.+|++||.+||+...+++||||||.|||+++.+.++|+|||
T Consensus 95 ~~~~yll~Pyy~~Gsl~d~i~~~k~kg~~~sE~~iL~if~gic~gL~~lH~~~~~yAH~DiKP~NILls~~~~~vl~D~G 174 (302)
T KOG2345|consen 95 KHEAYLLLPYYKRGSLLDEIERLKIKGNFVSEAQILWIFLGICRGLEALHEKEPPYAHRDIKPANILLSDSGLPVLMDLG 174 (302)
T ss_pred ceeEEEEeehhccccHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHhccCCcccccCCCcceeEecCCCceEEEecc
Confidence 38999999999999999864 3446899999999999999999999998889999999999999999999999999
Q ss_pred CCccccccccc---------ccCCCCCCcccCcccccC---CCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhh
Q 003963 652 LSRLKHETYLT---------TKTGKGTPQWMAPEVLRN---EPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVG 719 (783)
Q Consensus 652 la~~~~~~~~~---------~~~~~Gt~~Y~aPE~~~~---~~~s~~sDIwSLG~il~elltG~~Pf~~~~~~~~~~~i~ 719 (783)
.++...-.... ......|..|+|||.+.- ...+.++|||||||+||.||.|..||+..-.....-.+.
T Consensus 175 S~~~a~i~i~~~~~a~~lQe~a~e~Ct~pyRAPELf~vk~~~ti~ertDIWSLGCtLYa~mf~~sPfe~~~~~GgSlaLA 254 (302)
T KOG2345|consen 175 SATQAPIQIEGSRQALRLQEWAEERCTIPYRAPELFNVKSHCTITERTDIWSLGCTLYAMMFGESPFERIYQQGGSLALA 254 (302)
T ss_pred CccccceEeechHHHHHHHHHHHHhCCCcccCchheecccCcccccccchhhhhHHHHHHHHcCCcchHHhhcCCeEEEe
Confidence 98754322111 112246899999999864 445889999999999999999999996543321111222
Q ss_pred cccccccCC--CCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHH
Q 003963 720 FMNQRLEIP--KDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQ 764 (783)
Q Consensus 720 ~~~~~~~~~--~~~s~~l~~LI~~cL~~dP~~RPsa~ell~~L~~L~ 764 (783)
..+..+.+| ..++..+.+||++||+.||.+||++.+++..+++|.
T Consensus 255 v~n~q~s~P~~~~yse~l~~lik~mlqvdP~qRP~i~~ll~~~d~Li 301 (302)
T KOG2345|consen 255 VQNAQISIPNSSRYSEALHQLIKSMLQVDPNQRPTIPELLSKLDDLI 301 (302)
T ss_pred eeccccccCCCCCccHHHHHHHHHHhcCCcccCCCHHHHHHHHHhhc
Confidence 233334444 348899999999999999999999999999998874
No 144
>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl
Probab=100.00 E-value=5.3e-38 Score=338.64 Aligned_cols=259 Identities=23% Similarity=0.337 Sum_probs=212.6
Q ss_pred ccceeEeeeeccCCcEEEEEEEEeC-CceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEeceeecCCceEEEE
Q 003963 504 WEDLTIGEQIGQGSCGTVYHAVWYG-SQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIVT 582 (783)
Q Consensus 504 ~~~y~i~~~LG~G~fG~Vy~a~~~~-~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lV~ 582 (783)
.++|++.++||.|+||.||+|.+.. ++.||+|.+...... .....+.+|+.+++.++||||+++++++..++.+++||
T Consensus 5 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~~~lv~ 83 (301)
T cd07873 5 LETYIKLDKLGEGTYATVYKGRSKLTDNLVALKEIRLEHEE-GAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVF 83 (301)
T ss_pred ccceEEeeEeccCcCEEEEEEEEcCCCcEEEEEEEeccccc-CchhHHHHHHHHHHhcCCCCcceEEEEEecCCeEEEEE
Confidence 4689999999999999999998764 567999998654322 22345678999999999999999999999999999999
Q ss_pred EecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCccccccccc
Q 003963 583 EFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETYLT 662 (783)
Q Consensus 583 E~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~~~ 662 (783)
||++ ++|.+++......+++..+..++.||+.||.|||+++ |+|+||||+|||++.++.++|+|||++.........
T Consensus 84 e~~~-~~l~~~l~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~--i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~ 160 (301)
T cd07873 84 EYLD-KDLKQYLDDCGNSINMHNVKLFLFQLLRGLNYCHRRK--VLHRDLKPQNLLINERGELKLADFGLARAKSIPTKT 160 (301)
T ss_pred eccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCC--eeCCCCCHHHEEECCCCcEEECcCcchhccCCCCCc
Confidence 9996 5999998776667899999999999999999999998 999999999999999999999999998765433333
Q ss_pred ccCCCCCCcccCcccccCC-CCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhcccc-----------------c
Q 003963 663 TKTGKGTPQWMAPEVLRNE-PSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQ-----------------R 724 (783)
Q Consensus 663 ~~~~~Gt~~Y~aPE~~~~~-~~s~~sDIwSLG~il~elltG~~Pf~~~~~~~~~~~i~~~~~-----------------~ 724 (783)
.....+++.|+|||++.+. .++.++|||||||++|+|++|++||...+..+....+..... .
T Consensus 161 ~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (301)
T cd07873 161 YSNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMSTGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEEFKS 240 (301)
T ss_pred ccccceeecccCcHHHhCCCCCccHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCChhhchhhhccccccc
Confidence 3344678999999998764 478899999999999999999999987766544332211000 0
Q ss_pred c-----------cCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhcCc
Q 003963 725 L-----------EIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQASR 772 (783)
Q Consensus 725 ~-----------~~~~~~s~~l~~LI~~cL~~dP~~RPsa~ell~~L~~L~~~~f~~~~ 772 (783)
. .....+++.+++||.+||+.||.+|||+.++ ++|+||++.-
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~ei------l~h~~f~~~~ 293 (301)
T cd07873 241 YNYPKYRADCLHNHAPRLDSDGAELLSKLLQFEGRKRISAEEA------MKHPYFHCLG 293 (301)
T ss_pred cccCccccccHHhhcCCCCHHHHHHHHHHhcCCcccCcCHHHH------hcCccccccc
Confidence 0 1123578899999999999999999999999 7899997754
No 145
>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2e-38 Score=348.85 Aligned_cols=259 Identities=35% Similarity=0.573 Sum_probs=210.1
Q ss_pred cccceeEeeeeccCCcEEEEEEEEeCCceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEeceeecCC-ceEEE
Q 003963 503 LWEDLTIGEQIGQGSCGTVYHAVWYGSQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQ-RLCIV 581 (783)
Q Consensus 503 ~~~~y~i~~~LG~G~fG~Vy~a~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~-~~~lV 581 (783)
..++|.-...||+|+||.||+|...++..||||.+....... ..+|.+|+.++.+++|||+|+++|||.+.+ ..+||
T Consensus 73 AT~~Fs~~~~ig~Ggfg~VYkG~l~~~~~vAVK~~~~~~~~~--~~eF~~Ei~~ls~l~H~Nlv~LlGyC~e~~~~~~LV 150 (361)
T KOG1187|consen 73 ATNNFSESNLIGEGGFGTVYKGVLSDGTVVAVKRLSSNSGQG--EREFLNEVEILSRLRHPNLVKLLGYCLEGGEHRLLV 150 (361)
T ss_pred HHhCCchhcceecCCCeEEEEEEECCCCEEEEEEecCCCCcc--hhHHHHHHHHHhcCCCcCcccEEEEEecCCceEEEE
Confidence 357898889999999999999999888899999877655432 356999999999999999999999999988 59999
Q ss_pred EEecCCCCHHHHHhhcCC-cchHHHHHHHHHHHHHHHHHHHhCC-CCEEecCCCCCCEEEcCCCcEEEEecCCCccccc-
Q 003963 582 TEFLPRGSLFRLLQRNTT-KLDWRRRILMALDIARGVSYLHHCN-PPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHE- 658 (783)
Q Consensus 582 ~E~~~ggsL~~~L~~~~~-~l~~~~~~~i~~qi~~aL~~LH~~~-~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~~- 658 (783)
+|||+.|+|.++|..... +++|..+++|+.++++||+|||... ++||||||||.|||+|.++..||+|||+|+..+.
T Consensus 151 YEym~nGsL~d~L~~~~~~~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILLD~~~~aKlsDFGLa~~~~~~ 230 (361)
T KOG1187|consen 151 YEYMPNGSLEDHLHGKKGEPLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILLDEDFNAKLSDFGLAKLGPEG 230 (361)
T ss_pred EEccCCCCHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeECCCCCEEccCccCcccCCcc
Confidence 999999999999987655 8999999999999999999999854 4799999999999999999999999999976654
Q ss_pred ccccccCC-CCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCC---hHHHHHH----hhc--cc--cccc
Q 003963 659 TYLTTKTG-KGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLN---SMQVIGA----VGF--MN--QRLE 726 (783)
Q Consensus 659 ~~~~~~~~-~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~elltG~~Pf~~~~---~~~~~~~----i~~--~~--~~~~ 726 (783)
... ..+. .||..|++||.+.....+.++||||||++|+||+||+.|.+... ....... +.. .. -.+.
T Consensus 231 ~~~-~~~~~~gt~gY~~PEy~~~g~lt~KsDVySFGVvllElitgr~~~d~~~~~~~~~l~~w~~~~~~~~~~~eiiD~~ 309 (361)
T KOG1187|consen 231 DTS-VSTTVMGTFGYLAPEYASTGKLTEKSDVYSFGVVLLELITGRKAVDQSRPRGELSLVEWAKPLLEEGKLREIVDPR 309 (361)
T ss_pred ccc-eeeecCCCCccCChhhhccCCcCcccccccchHHHHHHHhCCcccCCCCCcccccHHHHHHHHHHCcchhheeCCC
Confidence 211 1122 78999999999999999999999999999999999998876432 1111111 100 00 0112
Q ss_pred CC-CCCC--H---HHHHHHHHhhhhCCCCCCCHHHHHHHHHHHH
Q 003963 727 IP-KDVD--P---RWAAIVESCWHSDPQCRPSFQELVDKLRDLQ 764 (783)
Q Consensus 727 ~~-~~~s--~---~l~~LI~~cL~~dP~~RPsa~ell~~L~~L~ 764 (783)
+. ...+ . .+..+...|++.+|..||++.++++.|+.+.
T Consensus 310 l~~~~~~~~~~~~~~~~~a~~C~~~~~~~RP~m~~Vv~~L~~~~ 353 (361)
T KOG1187|consen 310 LKEGEYPDEKEVKKLAELALRCLRPDPKERPTMSQVVKELEGIL 353 (361)
T ss_pred ccCCCCChHHHHHHHHHHHHHHcCcCCCcCcCHHHHHHHHHhhc
Confidence 22 2333 2 3567888999999999999999988885554
No 146
>PHA03212 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=5.4e-38 Score=351.59 Aligned_cols=253 Identities=23% Similarity=0.321 Sum_probs=203.1
Q ss_pred ccccceeEeeeeccCCcEEEEEEEEeC-CceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEeceeecCCceEE
Q 003963 502 ILWEDLTIGEQIGQGSCGTVYHAVWYG-SQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCI 580 (783)
Q Consensus 502 ~~~~~y~i~~~LG~G~fG~Vy~a~~~~-~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~l 580 (783)
+...+|++.++||+|+||.||++.+.. ++.||||+... ..+.+|+.+++.|+|||||++++++......++
T Consensus 89 ~~~~~y~~~~~lg~G~~g~V~~~~d~~~~~~vaiK~~~~--------~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~l 160 (391)
T PHA03212 89 IEKAGFSILETFTPGAEGFAFACIDNKTCEHVVIKAGQR--------GGTATEAHILRAINHPSIIQLKGTFTYNKFTCL 160 (391)
T ss_pred cccCCcEEEEEEcCCCCeEEEEEEECCCCCEEEEechhh--------hhhHHHHHHHHhCCCCCCCCEeEEEEECCeeEE
Confidence 345689999999999999999999864 46799996432 345789999999999999999999999999999
Q ss_pred EEEecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCcccccc-
Q 003963 581 VTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHET- 659 (783)
Q Consensus 581 V~E~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~~~- 659 (783)
|||++. ++|..++... ..+++..++.++.||+.||.|||+++ ||||||||+||||+.++.+||+|||++......
T Consensus 161 v~e~~~-~~L~~~l~~~-~~l~~~~~~~i~~qi~~aL~ylH~~~--IvHrDiKP~NIll~~~~~vkL~DFG~a~~~~~~~ 236 (391)
T PHA03212 161 ILPRYK-TDLYCYLAAK-RNIAICDILAIERSVLRAIQYLHENR--IIHRDIKAENIFINHPGDVCLGDFGAACFPVDIN 236 (391)
T ss_pred EEecCC-CCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCC--cccCCCChHhEEEcCCCCEEEEeCCccccccccc
Confidence 999994 6898888654 45889999999999999999999998 999999999999999999999999998653322
Q ss_pred cccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCC-------hHHHHHHhhc-c----------
Q 003963 660 YLTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLN-------SMQVIGAVGF-M---------- 721 (783)
Q Consensus 660 ~~~~~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~elltG~~Pf~~~~-------~~~~~~~i~~-~---------- 721 (783)
.......+||+.|+|||++.+..++.++|||||||++|+|++|..||.... ....+..+.. .
T Consensus 237 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~p~~~~~~~~~~~~~~~~l~~i~~~~g~~p~~~~~~ 316 (391)
T PHA03212 237 ANKYYGWAGTIATNAPELLARDPYGPAVDIWSAGIVLFEMATCHDSLFEKDGLDGDCDSDRQIKLIIRRSGTHPNEFPID 316 (391)
T ss_pred ccccccccCccCCCChhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCcCCcccccccCchhHHHHHHHHHhcCChhhcCcc
Confidence 122234579999999999999999999999999999999999998764321 0011100000 0
Q ss_pred -------------cccccCC---------CCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhcCc
Q 003963 722 -------------NQRLEIP---------KDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQASR 772 (783)
Q Consensus 722 -------------~~~~~~~---------~~~s~~l~~LI~~cL~~dP~~RPsa~ell~~L~~L~~~~f~~~~ 772 (783)
......+ ..++.++.+||.+||+.||.+|||+.++ |+|+||+...
T Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Li~~mL~~dP~~Rpta~el------L~hp~f~~~~ 383 (391)
T PHA03212 317 AQANLDEIYIGLAKKSSRKPGSRPLWTNLYELPIDLEYLICKMLAFDAHHRPSAEAL------LDFAAFQDIP 383 (391)
T ss_pred hhHHHHHHHHHHHhccCCCCCCCCCHHHHhhhhhhHHHHHHHHhcCChhhCCCHHHH------hcChhhccCC
Confidence 0000000 1346789999999999999999999999 6899998754
No 147
>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly
Probab=100.00 E-value=1.7e-37 Score=332.59 Aligned_cols=259 Identities=30% Similarity=0.536 Sum_probs=218.2
Q ss_pred cccceeEeeeeccCCcEEEEEEEEeC------CceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEeceeecCC
Q 003963 503 LWEDLTIGEQIGQGSCGTVYHAVWYG------SQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQ 576 (783)
Q Consensus 503 ~~~~y~i~~~LG~G~fG~Vy~a~~~~------~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~ 576 (783)
.+.+|.+.+.||+|+||.||++.+.. ...+|+|.+... .......+.+|+.+++.++||||+++++++...+
T Consensus 3 ~~~~~~~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~ 80 (288)
T cd05093 3 KRHNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDA--SDNARKDFHREAELLTNLQHEHIVKFYGVCVEGD 80 (288)
T ss_pred chHHeeeccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCc--CHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCC
Confidence 45789999999999999999998532 235889987643 2344567889999999999999999999999999
Q ss_pred ceEEEEEecCCCCHHHHHhhcC------------CcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCc
Q 003963 577 RLCIVTEFLPRGSLFRLLQRNT------------TKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWT 644 (783)
Q Consensus 577 ~~~lV~E~~~ggsL~~~L~~~~------------~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~ 644 (783)
.+++||||+++++|.+++.... ..+++..++.++.||+.||+|||+++ ++||||||+|||++.++.
T Consensus 81 ~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH~~~--i~H~dlkp~Nili~~~~~ 158 (288)
T cd05093 81 PLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLASQH--FVHRDLATRNCLVGENLL 158 (288)
T ss_pred ccEEEEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCC--eeecccCcceEEEccCCc
Confidence 9999999999999999996432 24899999999999999999999998 999999999999999999
Q ss_pred EEEEecCCCccccccc--ccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCChHHHHHHhhcc
Q 003963 645 VKVGDFGLSRLKHETY--LTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELAT-EKIPWDNLNSMQVIGAVGFM 721 (783)
Q Consensus 645 vkL~DFGla~~~~~~~--~~~~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~ellt-G~~Pf~~~~~~~~~~~i~~~ 721 (783)
++|+|||++....... .......++..|+|||++.+..++.++|||||||++|+|++ |.+||...........+..
T Consensus 159 ~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~~l~t~g~~p~~~~~~~~~~~~i~~- 237 (288)
T cd05093 159 VKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEVIECITQ- 237 (288)
T ss_pred EEeccCCccccccCCceeecCCCCCccccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHc-
Confidence 9999999987543221 11223345778999999999999999999999999999998 9999988877666655532
Q ss_pred cccccCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHH
Q 003963 722 NQRLEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQ 766 (783)
Q Consensus 722 ~~~~~~~~~~s~~l~~LI~~cL~~dP~~RPsa~ell~~L~~L~~~ 766 (783)
......+..++.++.+|+.+||+.||.+||++.++++.|+++.+.
T Consensus 238 ~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~v~~~l~~~~~~ 282 (288)
T cd05093 238 GRVLQRPRTCPKEVYDLMLGCWQREPHMRLNIKEIHSLLQNLAKA 282 (288)
T ss_pred CCcCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHHHh
Confidence 223445667899999999999999999999999999998887653
No 148
>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase. Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.
Probab=100.00 E-value=1.1e-37 Score=334.41 Aligned_cols=260 Identities=29% Similarity=0.472 Sum_probs=218.0
Q ss_pred ccceeEeeeeccCCcEEEEEEEEeC-CceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEeceeecCCceEEEE
Q 003963 504 WEDLTIGEQIGQGSCGTVYHAVWYG-SQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIVT 582 (783)
Q Consensus 504 ~~~y~i~~~LG~G~fG~Vy~a~~~~-~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lV~ 582 (783)
.+.|++.++||.|+||.||+|.+.. +..|++|++... .....+.+.+|+.+++.++||||+++++++..++.+|+||
T Consensus 11 ~~~y~i~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 88 (292)
T cd06644 11 NEVWEIIGELGDGAFGKVYKAKNKETGALAAAKVIETK--SEEELEDYMVEIEILATCNHPYIVKLLGAFYWDGKLWIMI 88 (292)
T ss_pred chhhhhhheecCCCCeEEEEEEECCCCceEEEEEeccC--CHHHHHHHHHHHHHHHhCCCCcEeeeEEEEEeCCeEEEEE
Confidence 3679999999999999999999865 567999998654 3445677889999999999999999999999999999999
Q ss_pred EecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCccccccccc
Q 003963 583 EFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETYLT 662 (783)
Q Consensus 583 E~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~~~ 662 (783)
||+++++|..++.+....+++..++.++.||+.+|.|||+++ |+|+||||+||+++.++.++|+|||++.........
T Consensus 89 e~~~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~--i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~~~ 166 (292)
T cd06644 89 EFCPGGAVDAIMLELDRGLTEPQIQVICRQMLEALQYLHSMK--IIHRDLKAGNVLLTLDGDIKLADFGVSAKNVKTLQR 166 (292)
T ss_pred ecCCCCcHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhcCC--eeecCCCcceEEEcCCCCEEEccCccceeccccccc
Confidence 999999999888765667899999999999999999999988 999999999999999999999999998754433333
Q ss_pred ccCCCCCCcccCccccc-----CCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccc-ccccCCCCCCHHHH
Q 003963 663 TKTGKGTPQWMAPEVLR-----NEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMN-QRLEIPKDVDPRWA 736 (783)
Q Consensus 663 ~~~~~Gt~~Y~aPE~~~-----~~~~s~~sDIwSLG~il~elltG~~Pf~~~~~~~~~~~i~~~~-~~~~~~~~~s~~l~ 736 (783)
.....+++.|+|||.+. ...++.++|||||||++|+|++|.+||...+.......+.... .....+..++.++.
T Consensus 167 ~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (292)
T cd06644 167 RDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSEPPTLSQPSKWSMEFR 246 (292)
T ss_pred cceecCCccccCceeeccccccCCCCCchhhhHhHHHHHHHHhcCCCCCccccHHHHHHHHhcCCCccCCCCcccCHHHH
Confidence 33456789999999985 3446789999999999999999999998777655444432221 12334567889999
Q ss_pred HHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhcCcC
Q 003963 737 AIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQASRS 773 (783)
Q Consensus 737 ~LI~~cL~~dP~~RPsa~ell~~L~~L~~~~f~~~~~ 773 (783)
+||.+||..+|++||++.++ +.|+||.....
T Consensus 247 ~li~~~l~~~p~~Rp~~~~i------l~~~~~~~~~~ 277 (292)
T cd06644 247 DFLKTALDKHPETRPSAAQL------LEHPFVSSVTS 277 (292)
T ss_pred HHHHHHhcCCcccCcCHHHH------hcCcccccccc
Confidence 99999999999999999999 67899866544
No 149
>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk. Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r
Probab=100.00 E-value=1.2e-37 Score=328.21 Aligned_cols=256 Identities=34% Similarity=0.607 Sum_probs=216.6
Q ss_pred ccccccceeEeeeeccCCcEEEEEEEEeCCceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEeceeecCCceE
Q 003963 500 YEILWEDLTIGEQIGQGSCGTVYHAVWYGSQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLC 579 (783)
Q Consensus 500 ~e~~~~~y~i~~~LG~G~fG~Vy~a~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~ 579 (783)
|++..++|++.++||+|+||.||+|.+..+..||+|.+....... ..+.+|+.+++.++|+||+++++++. ....+
T Consensus 1 ~~~~~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~k~~~~~~~~~---~~~~~E~~~l~~l~~~~i~~~~~~~~-~~~~~ 76 (260)
T cd05070 1 WEIPRESLQLIKKLGNGQFGEVWMGTWNGNTKVAVKTLKPGTMSP---ESFLEEAQIMKKLRHDKLVQLYAVVS-EEPIY 76 (260)
T ss_pred CCCchHHhhhhheeccccCceEEEEEecCCceeEEEEecCCCCCH---HHHHHHHHHHHhcCCCceEEEEeEEC-CCCcE
Confidence 345667899999999999999999998877789999987655433 46889999999999999999999875 45689
Q ss_pred EEEEecCCCCHHHHHhhc-CCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCccccc
Q 003963 580 IVTEFLPRGSLFRLLQRN-TTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHE 658 (783)
Q Consensus 580 lV~E~~~ggsL~~~L~~~-~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~~ 658 (783)
++|||+++++|.+++... ...+++..++.++.|++.||.|||+++ |+|+||||+||++++++.++|+|||++.....
T Consensus 77 lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~--i~H~di~p~Nili~~~~~~~l~dfg~~~~~~~ 154 (260)
T cd05070 77 IVTEYMSKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERMN--YIHRDLRSANILVGDGLVCKIADFGLARLIED 154 (260)
T ss_pred EEEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCC--cccCCCccceEEEeCCceEEeCCceeeeeccC
Confidence 999999999999999753 345889999999999999999999998 99999999999999999999999999876543
Q ss_pred ccc-cccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCChHHHHHHhhcccccccCCCCCCHHHH
Q 003963 659 TYL-TTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELAT-EKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWA 736 (783)
Q Consensus 659 ~~~-~~~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~l~ 736 (783)
... ......++..|+|||.+.+..++.++|||||||++|+|++ |.+||...+.......+.. ....+.+...+..+.
T Consensus 155 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 233 (260)
T cd05070 155 NEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNNREVLEQVER-GYRMPCPQDCPISLH 233 (260)
T ss_pred cccccccCCCCCccccChHHHhcCCCcchhhhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHc-CCCCCCCCcCCHHHH
Confidence 221 1122335668999999988889999999999999999999 9999988777666655532 234556677899999
Q ss_pred HHHHHhhhhCCCCCCCHHHHHHHHHH
Q 003963 737 AIVESCWHSDPQCRPSFQELVDKLRD 762 (783)
Q Consensus 737 ~LI~~cL~~dP~~RPsa~ell~~L~~ 762 (783)
+|+.+||.++|.+|||+.++++.|+.
T Consensus 234 ~li~~~l~~~p~~Rpt~~~l~~~l~~ 259 (260)
T cd05070 234 ELMLQCWKKDPEERPTFEYLQSFLED 259 (260)
T ss_pred HHHHHHcccCcccCcCHHHHHHHHhc
Confidence 99999999999999999999888764
No 150
>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t
Probab=100.00 E-value=1.9e-37 Score=326.29 Aligned_cols=257 Identities=33% Similarity=0.597 Sum_probs=219.1
Q ss_pred ccccccceeEeeeeccCCcEEEEEEEEeCCceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEeceeecCCceE
Q 003963 500 YEILWEDLTIGEQIGQGSCGTVYHAVWYGSQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLC 579 (783)
Q Consensus 500 ~e~~~~~y~i~~~LG~G~fG~Vy~a~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~ 579 (783)
|++..++|++.++||.|+||.||++.+.+++.|+||.+....... ..+.+|+.+++.++|+||+++++++......+
T Consensus 1 ~~~~~~~~~i~~~ig~g~~~~v~~~~~~~~~~~~vK~~~~~~~~~---~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 77 (261)
T cd05034 1 WEIPRESLKLERKLGAGQFGEVWMGTWNGTTKVAVKTLKPGTMSP---EAFLQEAQIMKKLRHDKLVQLYAVCSEEEPIY 77 (261)
T ss_pred CccchhheeeeeeeccCcceEEEEEEEcCCceEEEEEecCCccCH---HHHHHHHHHHhhCCCCCEeeeeeeeecCCceE
Confidence 355678999999999999999999998777889999987654432 46788999999999999999999999889999
Q ss_pred EEEEecCCCCHHHHHhhcC-CcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCccccc
Q 003963 580 IVTEFLPRGSLFRLLQRNT-TKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHE 658 (783)
Q Consensus 580 lV~E~~~ggsL~~~L~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~~ 658 (783)
+||||+++++|.+++.... ..+++..+..++.||+.||.|||+++ |+|+||||+||+++.++.++|+|||++.....
T Consensus 78 ~v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~i~~al~~lh~~~--i~h~di~p~nili~~~~~~~l~d~g~~~~~~~ 155 (261)
T cd05034 78 IVTEYMSKGSLLDFLKSGEGKKLRLPQLVDMAAQIAEGMAYLESRN--YIHRDLAARNILVGENLVCKIADFGLARLIED 155 (261)
T ss_pred EEEeccCCCCHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhCC--cccCCcchheEEEcCCCCEEECccccceeccc
Confidence 9999999999999997643 46899999999999999999999998 99999999999999999999999999876543
Q ss_pred cc-ccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCChHHHHHHhhcccccccCCCCCCHHHH
Q 003963 659 TY-LTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELAT-EKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWA 736 (783)
Q Consensus 659 ~~-~~~~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~l~ 736 (783)
.. .......++..|+|||.+.+..++.++|||||||++|+|++ |+.||...........+.. ......+...+.++.
T Consensus 156 ~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 234 (261)
T cd05034 156 DEYTAREGAKFPIKWTAPEAANYGRFTIKSDVWSFGILLTEIVTYGRVPYPGMTNREVLEQVER-GYRMPRPPNCPEELY 234 (261)
T ss_pred hhhhhhhccCCCccccCHHHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHc-CCCCCCCCCCCHHHH
Confidence 21 11112234678999999999889999999999999999998 9999988777666655532 224455667789999
Q ss_pred HHHHHhhhhCCCCCCCHHHHHHHHHH
Q 003963 737 AIVESCWHSDPQCRPSFQELVDKLRD 762 (783)
Q Consensus 737 ~LI~~cL~~dP~~RPsa~ell~~L~~ 762 (783)
+++.+||..+|.+||++.++++.|+.
T Consensus 235 ~~i~~~l~~~p~~Rp~~~~l~~~l~~ 260 (261)
T cd05034 235 DLMLQCWDKDPEERPTFEYLQSFLED 260 (261)
T ss_pred HHHHHHcccCcccCCCHHHHHHHHhc
Confidence 99999999999999999999888764
No 151
>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl. Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor
Probab=100.00 E-value=2.1e-37 Score=328.02 Aligned_cols=254 Identities=30% Similarity=0.505 Sum_probs=211.0
Q ss_pred eeEeeeeccCCcEEEEEEEEeCCc---eEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEeceeecC------Cc
Q 003963 507 LTIGEQIGQGSCGTVYHAVWYGSQ---DVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSP------QR 577 (783)
Q Consensus 507 y~i~~~LG~G~fG~Vy~a~~~~~~---~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~------~~ 577 (783)
|.++++||+|+||.||+|.+.... .||+|.+............+.+|+.+++.++||||+++++++... ..
T Consensus 1 ~~i~~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 80 (272)
T cd05075 1 LALGKTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAICTRSEMEDFLSEAVCMKEFDHPNVMRLIGVCLQTVESEGYPS 80 (272)
T ss_pred CccccccCcccCceEEEeEEccCCCeeeEEEEecccCcCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEccCCcccCCCC
Confidence 356789999999999999876543 589999877655566677889999999999999999999976432 24
Q ss_pred eEEEEEecCCCCHHHHHhh-----cCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCC
Q 003963 578 LCIVTEFLPRGSLFRLLQR-----NTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGL 652 (783)
Q Consensus 578 ~~lV~E~~~ggsL~~~L~~-----~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGl 652 (783)
.+++|||+.+++|.+++.. ....+++..++.++.||+.||+|||+++ |+||||||+|||++.++.++|+|||+
T Consensus 81 ~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~--i~H~dlkp~Nil~~~~~~~kl~Dfg~ 158 (272)
T cd05075 81 PVVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLSSKS--FIHRDLAARNCMLNENMNVCVADFGL 158 (272)
T ss_pred cEEEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHHHCC--eeccccchhheEEcCCCCEEECCCCc
Confidence 6899999999999988742 2344789999999999999999999988 99999999999999999999999999
Q ss_pred Ccccccccc--cccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCChHHHHHHhhcccccccCCC
Q 003963 653 SRLKHETYL--TTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELAT-EKIPWDNLNSMQVIGAVGFMNQRLEIPK 729 (783)
Q Consensus 653 a~~~~~~~~--~~~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~~~~~ 729 (783)
++....... ......+++.|++||.+.+..++.++|||||||++|+|++ |..||......+....+.. ......+.
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~-~~~~~~~~ 237 (272)
T cd05075 159 SKKIYNGDYYRQGRIAKMPVKWIAIESLADRVYTTKSDVWSFGVTMWEIATRGQTPYPGVENSEIYDYLRQ-GNRLKQPP 237 (272)
T ss_pred ccccCcccceecCCcccCCcccCCHHHccCCCcChHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHc-CCCCCCCC
Confidence 876543221 1223345778999999999999999999999999999999 8999988777665555432 23345566
Q ss_pred CCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHH
Q 003963 730 DVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDL 763 (783)
Q Consensus 730 ~~s~~l~~LI~~cL~~dP~~RPsa~ell~~L~~L 763 (783)
.++..+.++|.+||..||.+|||+.++++.|+++
T Consensus 238 ~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l~~~ 271 (272)
T cd05075 238 DCLDGLYSLMSSCWLLNPKDRPSFETLRCELEKA 271 (272)
T ss_pred CCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 7889999999999999999999999999998764
No 152
>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2. Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A
Probab=100.00 E-value=1.3e-37 Score=336.41 Aligned_cols=271 Identities=29% Similarity=0.553 Sum_probs=222.3
Q ss_pred ccccceeEeeeeccCCcEEEEEEEEeCC-c--eEEEEEEecccCCHHHHHHHHHHHHHHHhC-CCCceeeEeceeecCCc
Q 003963 502 ILWEDLTIGEQIGQGSCGTVYHAVWYGS-Q--DVAVKVFSRQEYSDEVIHSFRQEVSLMKRL-RHPNVLLFMGAVTSPQR 577 (783)
Q Consensus 502 ~~~~~y~i~~~LG~G~fG~Vy~a~~~~~-~--~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l-~HpnIv~l~~~~~~~~~ 577 (783)
+.+++|++.+.||+|+||.||+|.+... . .+++|.+... ........+.+|+.++.++ +||||+++++++...+.
T Consensus 4 ~~~~~~~~~~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~~-~~~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~~~~~~ 82 (303)
T cd05088 4 LEWNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEY-ASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGY 82 (303)
T ss_pred cchhhceeeeeecCCCCceEEEEEEccCCceeeEEEEEeccc-CCHHHHHHHHHHHHHHHHhcCCCCcceEEEEECCCCC
Confidence 3467899999999999999999997543 2 3577766532 2344556788999999999 89999999999999999
Q ss_pred eEEEEEecCCCCHHHHHhhcC---------------CcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCC
Q 003963 578 LCIVTEFLPRGSLFRLLQRNT---------------TKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKH 642 (783)
Q Consensus 578 ~~lV~E~~~ggsL~~~L~~~~---------------~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~ 642 (783)
+|+||||+++++|.+++.... ..+++..++.++.||+.||+|||+++ |+||||||+|||++.+
T Consensus 83 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~g--i~H~dlkp~Nili~~~ 160 (303)
T cd05088 83 LYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQ--FIHRDLAARNILVGEN 160 (303)
T ss_pred ceEEEEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHHhCC--ccccccchheEEecCC
Confidence 999999999999999996532 24789999999999999999999998 9999999999999999
Q ss_pred CcEEEEecCCCcccccccccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCChHHHHHHhhcc
Q 003963 643 WTVKVGDFGLSRLKHETYLTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELAT-EKIPWDNLNSMQVIGAVGFM 721 (783)
Q Consensus 643 ~~vkL~DFGla~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~ellt-G~~Pf~~~~~~~~~~~i~~~ 721 (783)
+.+||+|||++...... .......++..|+|||.+.+..++.++|||||||++|+|++ |..||...+..+....+. .
T Consensus 161 ~~~kl~dfg~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~-~ 238 (303)
T cd05088 161 YVAKIADFGLSRGQEVY-VKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLP-Q 238 (303)
T ss_pred CcEEeCccccCcccchh-hhcccCCCcccccCHHHHhccCCcccccchhhhhHHHHHHhcCCCCcccCChHHHHHHHh-c
Confidence 99999999998643221 11222234678999999988889999999999999999998 999998777666555442 2
Q ss_pred cccccCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhcCcCCCCC
Q 003963 722 NQRLEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQASRSTVGD 777 (783)
Q Consensus 722 ~~~~~~~~~~s~~l~~LI~~cL~~dP~~RPsa~ell~~L~~L~~~~f~~~~~~~~~ 777 (783)
......+..+++++.+||.+||..+|.+||++.+++..|.++...-.....+.+.+
T Consensus 239 ~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~l~~~~~~~~~~~~~~~~~ 294 (303)
T cd05088 239 GYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLEERKTYVNTTLYE 294 (303)
T ss_pred CCcCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhhhhhhhhhhhc
Confidence 22344556688999999999999999999999999999998877766666555543
No 153
>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes. Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular
Probab=100.00 E-value=1.7e-37 Score=325.11 Aligned_cols=247 Identities=32% Similarity=0.557 Sum_probs=208.5
Q ss_pred eeeccCCcEEEEEEEEe-CCceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEeceeecCCceEEEEEecCCCC
Q 003963 511 EQIGQGSCGTVYHAVWY-GSQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIVTEFLPRGS 589 (783)
Q Consensus 511 ~~LG~G~fG~Vy~a~~~-~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lV~E~~~ggs 589 (783)
++||+|+||.||+|.+. .++.||+|.+... ...+....+.+|+++++.++||||+++++++.....+++||||+++++
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~-~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~ 79 (252)
T cd05084 1 ERIGRGNFGEVFSGRLRADNTPVAVKSCRET-LPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGD 79 (252)
T ss_pred CccCcccCccEEEEEEecCCceEEEEecCcc-CCHHHHHHHHHHHHHHHhCCCCCcceEEEEEcCCCCeEEEEeeccCCc
Confidence 36899999999999986 4577999987643 344556778999999999999999999999999999999999999999
Q ss_pred HHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCcccccccccc--cCCC
Q 003963 590 LFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETYLTT--KTGK 667 (783)
Q Consensus 590 L~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~~~~--~~~~ 667 (783)
|.+++......+++..++.++.|++.||.|||+++ |+|+||||+|||++.++.+||+|||++.......... ....
T Consensus 80 L~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~--i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~ 157 (252)
T cd05084 80 FLTFLRTEGPRLKVKELIQMVENAAAGMEYLESKH--CIHRDLAARNCLVTEKNVLKISDFGMSREEEDGVYASTGGMKQ 157 (252)
T ss_pred HHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCC--ccccccchheEEEcCCCcEEECccccCcccccccccccCCCCC
Confidence 99999766666899999999999999999999998 9999999999999999999999999987543321111 1112
Q ss_pred CCCcccCcccccCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCChHHHHHHhhcccccccCCCCCCHHHHHHHHHhhhhC
Q 003963 668 GTPQWMAPEVLRNEPSDEKSDVYSFGVILWELAT-EKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAAIVESCWHSD 746 (783)
Q Consensus 668 Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~l~~LI~~cL~~d 746 (783)
++..|+|||.+.+..++.++|||||||++|+|++ |..||...........+.. ......+..++..+.+|+.+||..+
T Consensus 158 ~~~~y~aPE~~~~~~~~~~~Dv~slG~il~e~~~~~~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~li~~~l~~~ 236 (252)
T cd05084 158 IPVKWTAPEALNYGRYSSESDVWSFGILLWEAFSLGAVPYANLSNQQTREAIEQ-GVRLPCPELCPDAVYRLMERCWEYD 236 (252)
T ss_pred CceeecCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccCHHHHHHHHHc-CCCCCCcccCCHHHHHHHHHHcCCC
Confidence 3457999999999889999999999999999998 9999987776655544432 2344566778999999999999999
Q ss_pred CCCCCCHHHHHHHHH
Q 003963 747 PQCRPSFQELVDKLR 761 (783)
Q Consensus 747 P~~RPsa~ell~~L~ 761 (783)
|.+||++.++++.|+
T Consensus 237 p~~Rps~~~~~~~l~ 251 (252)
T cd05084 237 PGQRPSFSTVHQELQ 251 (252)
T ss_pred hhhCcCHHHHHHHHh
Confidence 999999999998875
No 154
>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2. Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve
Probab=100.00 E-value=2.8e-37 Score=328.97 Aligned_cols=259 Identities=31% Similarity=0.552 Sum_probs=216.0
Q ss_pred cccceeEeeeeccCCcEEEEEEEEeCC-c----eEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEeceeecCCc
Q 003963 503 LWEDLTIGEQIGQGSCGTVYHAVWYGS-Q----DVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQR 577 (783)
Q Consensus 503 ~~~~y~i~~~LG~G~fG~Vy~a~~~~~-~----~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~ 577 (783)
...+|++.++||+|+||.||+|.+... . .||+|++.... .......+.+|+.+++.+.||||+++++++.. ..
T Consensus 5 ~~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~-~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~-~~ 82 (279)
T cd05109 5 KETELKKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENT-SPKANKEILDEAYVMAGVGSPYVCRLLGICLT-ST 82 (279)
T ss_pred chhheeeeeecCCCCCceEEEEEEecCCCccceEEEEEEecCCC-CHHHHHHHHHHHHHHHhcCCCCCceEEEEEcC-CC
Confidence 346899999999999999999986543 2 38999986543 34445678899999999999999999999875 45
Q ss_pred eEEEEEecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCcccc
Q 003963 578 LCIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKH 657 (783)
Q Consensus 578 ~~lV~E~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~ 657 (783)
.+++|||+++|+|.+++......+++..++.++.||+.||+|||+++ |+||||||+|||+++++.+||+|||+++...
T Consensus 83 ~~l~~~~~~~g~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~--iiH~dlkp~Nil~~~~~~~kL~dfG~~~~~~ 160 (279)
T cd05109 83 VQLVTQLMPYGCLLDYVRENKDRIGSQDLLNWCVQIAKGMSYLEEVR--LVHRDLAARNVLVKSPNHVKITDFGLARLLD 160 (279)
T ss_pred cEEEEEcCCCCCHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCC--eeccccccceEEEcCCCcEEECCCCceeecc
Confidence 78999999999999999876667899999999999999999999998 9999999999999999999999999987654
Q ss_pred ccccc--ccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCChHHHHHHhhcccccccCCCCCCHH
Q 003963 658 ETYLT--TKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELAT-EKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPR 734 (783)
Q Consensus 658 ~~~~~--~~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~ 734 (783)
..... .....+++.|++||.+.+..++.++|||||||++|||++ |..||...........+. .......+..++.+
T Consensus 161 ~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 239 (279)
T cd05109 161 IDETEYHADGGKVPIKWMALESILHRRFTHQSDVWSYGVTVWELMTFGAKPYDGIPAREIPDLLE-KGERLPQPPICTID 239 (279)
T ss_pred cccceeecCCCccchhhCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHH-CCCcCCCCccCCHH
Confidence 32211 112234678999999998889999999999999999998 999998877665554443 23344556778999
Q ss_pred HHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHH
Q 003963 735 WAAIVESCWHSDPQCRPSFQELVDKLRDLQRQ 766 (783)
Q Consensus 735 l~~LI~~cL~~dP~~RPsa~ell~~L~~L~~~ 766 (783)
+.++|.+||..||.+||++.+++..|+++...
T Consensus 240 ~~~li~~~l~~dp~~Rp~~~~l~~~l~~~~~~ 271 (279)
T cd05109 240 VYMIMVKCWMIDSECRPRFRELVDEFSRMARD 271 (279)
T ss_pred HHHHHHHHcCCChhhCcCHHHHHHHHHHhhcC
Confidence 99999999999999999999999888776543
No 155
>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=100.00 E-value=9.3e-38 Score=346.39 Aligned_cols=255 Identities=27% Similarity=0.335 Sum_probs=207.8
Q ss_pred cccceeEeeeeccCCcEEEEEEEEeC-CceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEeceeecC------
Q 003963 503 LWEDLTIGEQIGQGSCGTVYHAVWYG-SQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSP------ 575 (783)
Q Consensus 503 ~~~~y~i~~~LG~G~fG~Vy~a~~~~-~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~------ 575 (783)
..++|++.+.||+|+||.||++.+.. ++.||||++............+.+|+.+++.++||||+++++++...
T Consensus 22 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~~~~~~ 101 (364)
T cd07875 22 VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEF 101 (364)
T ss_pred hhcceeEEEEeecCCCeEEEEEEECCCCcEEEEEEeCccccCchhHHHHHHHHHHHHhcCCCCccccceeeccccccccc
Confidence 35789999999999999999999754 56799999976554455566788899999999999999999987543
Q ss_pred CceEEEEEecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCcc
Q 003963 576 QRLCIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRL 655 (783)
Q Consensus 576 ~~~~lV~E~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~ 655 (783)
..+|+||||+++ +|.+++.. .+++..+..++.||+.||+|||+++ |+||||||+|||++.++.+||+|||+++.
T Consensus 102 ~~~~lv~e~~~~-~l~~~~~~---~~~~~~~~~~~~qi~~aL~~LH~~~--ivH~Dlkp~NIll~~~~~~kL~DfG~a~~ 175 (364)
T cd07875 102 QDVYIVMELMDA-NLCQVIQM---ELDHERMSYLLYQMLCGIKHLHSAG--IIHRDLKPSNIVVKSDCTLKILDFGLART 175 (364)
T ss_pred CeEEEEEeCCCC-CHHHHHHh---cCCHHHHHHHHHHHHHHHHHHhhCC--eecCCCCHHHEEECCCCcEEEEeCCCccc
Confidence 357999999964 78877753 3788889999999999999999998 99999999999999999999999999976
Q ss_pred cccccccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhcccc------------
Q 003963 656 KHETYLTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQ------------ 723 (783)
Q Consensus 656 ~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~elltG~~Pf~~~~~~~~~~~i~~~~~------------ 723 (783)
..... ......||+.|+|||++.+..++.++|||||||++|+|++|+.||...+.......+.....
T Consensus 176 ~~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (364)
T cd07875 176 AGTSF-MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQP 254 (364)
T ss_pred cCCCC-cccCCcccCCcCCHHHHhCCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHhhhH
Confidence 54432 22345789999999999999999999999999999999999999987765544333211000
Q ss_pred --------cc--------------------cCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhc
Q 003963 724 --------RL--------------------EIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQA 770 (783)
Q Consensus 724 --------~~--------------------~~~~~~s~~l~~LI~~cL~~dP~~RPsa~ell~~L~~L~~~~f~~ 770 (783)
.+ ......+..+++||.+||+.||.+|||+.++ |+|+||+.
T Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~t~~e~------L~hp~~~~ 323 (364)
T cd07875 255 TVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEA------LQHPYINV 323 (364)
T ss_pred HHHHHHhhCCCcCCCChHhhCccccccccccccccccHHHHHHHHHhcCcCcccCCCHHHH------hcCccccc
Confidence 00 0111234678999999999999999999999 67888864
No 156
>PTZ00266 NIMA-related protein kinase; Provisional
Probab=100.00 E-value=1.4e-37 Score=370.25 Aligned_cols=266 Identities=24% Similarity=0.399 Sum_probs=215.0
Q ss_pred cccccccceeEeeeeccCCcEEEEEEEEeCC-ceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEeceeec--C
Q 003963 499 DYEILWEDLTIGEQIGQGSCGTVYHAVWYGS-QDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTS--P 575 (783)
Q Consensus 499 ~~e~~~~~y~i~~~LG~G~fG~Vy~a~~~~~-~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~--~ 575 (783)
+.+....+|+++++||.|+||.||+|.+... ..||+|++............+..|+.+|+.|+|||||+++++|.. .
T Consensus 7 ~ge~~l~~YeIl~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l~e~~~~~~~~EI~IL~~L~HPNIVrl~d~f~de~~ 86 (1021)
T PTZ00266 7 DGESRLNEYEVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGLKEREKSQLVIEVNVMRELKHKNIVRYIDRFLNKAN 86 (1021)
T ss_pred CCccccCCEEEEEEEecCCCeEEEEEEECCCCeEEEEEEEeccccCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEecCC
Confidence 3456678999999999999999999998664 568999988766666667789999999999999999999998854 4
Q ss_pred CceEEEEEecCCCCHHHHHhhc---CCcchHHHHHHHHHHHHHHHHHHHhCC-----CCEEecCCCCCCEEEcC------
Q 003963 576 QRLCIVTEFLPRGSLFRLLQRN---TTKLDWRRRILMALDIARGVSYLHHCN-----PPIIHRDLKSSNLLVDK------ 641 (783)
Q Consensus 576 ~~~~lV~E~~~ggsL~~~L~~~---~~~l~~~~~~~i~~qi~~aL~~LH~~~-----~~IvHrDIKp~NILl~~------ 641 (783)
..+|||||||++++|.++|... ...+++..++.|+.||+.||.|||+.+ .+||||||||+||||+.
T Consensus 87 ~~lyIVMEY~~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNILL~s~~~~lg 166 (1021)
T PTZ00266 87 QKLYILMEFCDAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLSTGIRHIG 166 (1021)
T ss_pred CEEEEEEeCCCCCcHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCcHHHeEeecCccccc
Confidence 5689999999999999998652 346899999999999999999999853 34999999999999964
Q ss_pred -----------CCcEEEEecCCCcccccccccccCCCCCCcccCcccccC--CCCCchhHHHHHHHHHHHHHcCCCCCCC
Q 003963 642 -----------HWTVKVGDFGLSRLKHETYLTTKTGKGTPQWMAPEVLRN--EPSDEKSDVYSFGVILWELATEKIPWDN 708 (783)
Q Consensus 642 -----------~~~vkL~DFGla~~~~~~~~~~~~~~Gt~~Y~aPE~~~~--~~~s~~sDIwSLG~il~elltG~~Pf~~ 708 (783)
.+.+||+|||++....... .....+||+.|+|||++.+ ..++.++||||||||||+|++|..||..
T Consensus 167 ~i~~~~~n~ng~~iVKLsDFGlAr~l~~~s-~~~s~vGTp~YmAPEvL~ge~~~~s~KSDVWSLG~ILYELLTGk~PF~~ 245 (1021)
T PTZ00266 167 KITAQANNLNGRPIAKIGDFGLSKNIGIES-MAHSCVGTPYYWSPELLLHETKSYDDKSDMWALGCIIYELCSGKTPFHK 245 (1021)
T ss_pred cccccccccCCCCceEEccCCccccccccc-cccccCCCccccCHHHHhccCCCCCchhHHHHHHHHHHHHHHCCCCCCc
Confidence 3458999999997654332 2234578999999999864 4578999999999999999999999976
Q ss_pred CChHHHHHHhhcccccccCC-CCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhcCcC
Q 003963 709 LNSMQVIGAVGFMNQRLEIP-KDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQASRS 773 (783)
Q Consensus 709 ~~~~~~~~~i~~~~~~~~~~-~~~s~~l~~LI~~cL~~dP~~RPsa~ell~~L~~L~~~~f~~~~~ 773 (783)
.+....+.... ...+.++ ..++.++.+||..||..+|.+||++.++ |.++|++....
T Consensus 246 ~~~~~qli~~l--k~~p~lpi~~~S~eL~dLI~~~L~~dPeeRPSa~Ql------L~h~~ik~i~~ 303 (1021)
T PTZ00266 246 ANNFSQLISEL--KRGPDLPIKGKSKELNILIKNLLNLSAKERPSALQC------LGYQIIKNVGP 303 (1021)
T ss_pred CCcHHHHHHHH--hcCCCCCcCCCCHHHHHHHHHHhcCChhHCcCHHHH------hccHHHhhcCC
Confidence 65443332221 1112222 3578999999999999999999999999 45678865543
No 157
>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase. Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio
Probab=100.00 E-value=2.2e-37 Score=325.77 Aligned_cols=246 Identities=27% Similarity=0.516 Sum_probs=209.0
Q ss_pred eeccCCcEEEEEEEEe---CCceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEeceeecCCceEEEEEecCCC
Q 003963 512 QIGQGSCGTVYHAVWY---GSQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIVTEFLPRG 588 (783)
Q Consensus 512 ~LG~G~fG~Vy~a~~~---~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lV~E~~~gg 588 (783)
+||+|+||.||+|.+. .+..+|+|++............+.+|+.+++.+.||||+++++++. ....++||||++++
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-~~~~~lv~e~~~~~ 80 (257)
T cd05116 2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDNNDPALKDELLREANVMQQLDNPYIVRMIGICE-AESWMLVMELAELG 80 (257)
T ss_pred cCCCcCCcceEEeEEecCCCceEEEEEEccCCCCcHHHHHHHHHHHHHHHhCCCCCcceEEEEEc-CCCcEEEEecCCCC
Confidence 6899999999999753 3467999998766555566778999999999999999999999876 45678999999999
Q ss_pred CHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCccccccccc---ccC
Q 003963 589 SLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETYLT---TKT 665 (783)
Q Consensus 589 sL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~~~---~~~ 665 (783)
+|.+++... ..+++..++.++.|++.||+|||+++ |+|+||||.|||++.++.+||+|||++......... ...
T Consensus 81 ~L~~~l~~~-~~~~~~~~~~i~~qi~~al~~lH~~~--i~H~dlkp~nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~ 157 (257)
T cd05116 81 PLNKFLQKN-KHVTEKNITELVHQVSMGMKYLEETN--FVHRDLAARNVLLVTQHYAKISDFGLSKALGADENYYKAKTH 157 (257)
T ss_pred cHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCC--EeecccchhhEEEcCCCeEEECCCccccccCCCCCeeeecCC
Confidence 999999754 46899999999999999999999998 999999999999999999999999998765433211 122
Q ss_pred CCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCChHHHHHHhhcccccccCCCCCCHHHHHHHHHhhh
Q 003963 666 GKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELAT-EKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAAIVESCWH 744 (783)
Q Consensus 666 ~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~l~~LI~~cL~ 744 (783)
..++..|+|||.+.+..++.++|||||||++|||++ |..||...........+.. ......|..+++++.+||.+||+
T Consensus 158 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~i~~-~~~~~~~~~~~~~l~~li~~~~~ 236 (257)
T cd05116 158 GKWPVKWYAPECMNYYKFSSKSDVWSFGVLMWEAFSYGQKPYKGMKGNEVTQMIES-GERMECPQRCPPEMYDLMKLCWT 236 (257)
T ss_pred CCCCccccCHhHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHC-CCCCCCCCCCCHHHHHHHHHHhc
Confidence 234678999999988889999999999999999998 9999998877766665543 23456777899999999999999
Q ss_pred hCCCCCCCHHHHHHHHHH
Q 003963 745 SDPQCRPSFQELVDKLRD 762 (783)
Q Consensus 745 ~dP~~RPsa~ell~~L~~ 762 (783)
.||.+||++.+|.+.|++
T Consensus 237 ~~p~~Rp~~~~i~~~l~~ 254 (257)
T cd05116 237 YGVDERPGFAVVELRLRN 254 (257)
T ss_pred cCchhCcCHHHHHHHHhc
Confidence 999999999999888764
No 158
>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,
Probab=100.00 E-value=1.6e-37 Score=332.99 Aligned_cols=262 Identities=31% Similarity=0.585 Sum_probs=220.9
Q ss_pred cccccccceeEeeeeccCCcEEEEEEEEeCC------ceEEEEEEecccCCHHHHHHHHHHHHHHHhC-CCCceeeEece
Q 003963 499 DYEILWEDLTIGEQIGQGSCGTVYHAVWYGS------QDVAVKVFSRQEYSDEVIHSFRQEVSLMKRL-RHPNVLLFMGA 571 (783)
Q Consensus 499 ~~e~~~~~y~i~~~LG~G~fG~Vy~a~~~~~------~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l-~HpnIv~l~~~ 571 (783)
.+++..++|++.+.||+|+||.||++.+... ..+|+|++..... ......+.+|+.+++.+ +|+||++++++
T Consensus 6 ~~~~~~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~~-~~~~~~~~~E~~~l~~l~~h~~i~~~~~~ 84 (293)
T cd05053 6 EWELPRDRLTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDAT-EKDLSDLVSEMEMMKMIGKHKNIINLLGV 84 (293)
T ss_pred ccccCHhHeEEeeEecccccccEEEEEEecCCCCCCceeEEEEEccCCCC-HHHHHHHHHHHHHHHhhcCCCCeeeEEEE
Confidence 3456667899999999999999999987532 4689999875433 33456788999999999 79999999999
Q ss_pred eecCCceEEEEEecCCCCHHHHHhhc---------------CCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCC
Q 003963 572 VTSPQRLCIVTEFLPRGSLFRLLQRN---------------TTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSN 636 (783)
Q Consensus 572 ~~~~~~~~lV~E~~~ggsL~~~L~~~---------------~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~N 636 (783)
+...+.++++|||+++++|..++... ...+++..++.++.||+.||.|||+++ |+|+||||+|
T Consensus 85 ~~~~~~~~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~--ivH~dlkp~N 162 (293)
T cd05053 85 CTQEGPLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLASKK--CIHRDLAARN 162 (293)
T ss_pred EcCCCCeEEEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHCC--ccccccceee
Confidence 99999999999999999999999642 345889999999999999999999988 9999999999
Q ss_pred EEEcCCCcEEEEecCCCcccccccc--cccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCChHH
Q 003963 637 LLVDKHWTVKVGDFGLSRLKHETYL--TTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELAT-EKIPWDNLNSMQ 713 (783)
Q Consensus 637 ILl~~~~~vkL~DFGla~~~~~~~~--~~~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~ellt-G~~Pf~~~~~~~ 713 (783)
||++.++.+||+|||+++....... ......++..|+|||++.+..++.++|||||||++|+|++ |..||......+
T Consensus 163 il~~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~ 242 (293)
T cd05053 163 VLVTEDHVMKIADFGLARDIHHIDYYRKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVEE 242 (293)
T ss_pred EEEcCCCeEEeCccccccccccccceeccCCCCCCccccCHHHhccCCcCcccceeehhhHHHHHhcCCCCCCCCCCHHH
Confidence 9999999999999999976543221 1222335678999999999999999999999999999997 999998887766
Q ss_pred HHHHhhcccccccCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHH
Q 003963 714 VIGAVGFMNQRLEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQ 764 (783)
Q Consensus 714 ~~~~i~~~~~~~~~~~~~s~~l~~LI~~cL~~dP~~RPsa~ell~~L~~L~ 764 (783)
....+. .......+..++..+.+|+.+||..+|.+|||+.++++.|+++.
T Consensus 243 ~~~~~~-~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~eil~~l~~~~ 292 (293)
T cd05053 243 LFKLLK-EGYRMEKPQNCTQELYHLMRDCWHEVPSQRPTFKQLVEDLDRML 292 (293)
T ss_pred HHHHHH-cCCcCCCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHHHHHhh
Confidence 665543 23344566778899999999999999999999999999998874
No 159
>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul
Probab=100.00 E-value=2.3e-37 Score=327.46 Aligned_cols=256 Identities=31% Similarity=0.525 Sum_probs=216.4
Q ss_pred ccceeEeeeeccCCcEEEEEEEEeCC----ceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEeceeecCCceE
Q 003963 504 WEDLTIGEQIGQGSCGTVYHAVWYGS----QDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLC 579 (783)
Q Consensus 504 ~~~y~i~~~LG~G~fG~Vy~a~~~~~----~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~ 579 (783)
..+|++.+.||+|+||.||+|.+..+ ..+|+|.+.... .......+.+|+.+++.++||||+++++++...+..|
T Consensus 3 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 81 (267)
T cd05066 3 ASCIKIEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGY-TEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSKPVM 81 (267)
T ss_pred HHHeEeeeeecccCCCceEEEEEecCCCCceEEEEEECCCCC-CHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccE
Confidence 36789999999999999999987532 258999886543 3445668899999999999999999999999999999
Q ss_pred EEEEecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCcccccc
Q 003963 580 IVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHET 659 (783)
Q Consensus 580 lV~E~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~~~ 659 (783)
+||||+++++|.+++......+++..++.++.|++.||.|||+.+ ++|+||||+|||++.++.++|+|||++......
T Consensus 82 lv~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~--i~h~dlkp~nili~~~~~~~l~dfg~~~~~~~~ 159 (267)
T cd05066 82 IVTEYMENGSLDAFLRKHDGQFTVIQLVGMLRGIASGMKYLSDMG--YVHRDLAARNILVNSNLVCKVSDFGLSRVLEDD 159 (267)
T ss_pred EEEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC--EeehhhchhcEEECCCCeEEeCCCCcccccccc
Confidence 999999999999999876667899999999999999999999998 999999999999999999999999998765432
Q ss_pred ccc---ccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCChHHHHHHhhcccccccCCCCCCHHH
Q 003963 660 YLT---TKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELAT-EKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRW 735 (783)
Q Consensus 660 ~~~---~~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~l 735 (783)
... .....++..|++||.+.+..++.++|+|||||++|++++ |..||......+....+... ...+.+..+++.+
T Consensus 160 ~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~ell~~g~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 238 (267)
T cd05066 160 PEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWEMSNQDVIKAIEEG-YRLPAPMDCPAAL 238 (267)
T ss_pred cceeeecCCCccceeecCHhHhccCccCchhhhHHHHHHHHHHhcCCCCCcccCCHHHHHHHHhCC-CcCCCCCCCCHHH
Confidence 211 112233568999999998889999999999999999887 99999887766555554322 2344556788999
Q ss_pred HHHHHHhhhhCCCCCCCHHHHHHHHHHH
Q 003963 736 AAIVESCWHSDPQCRPSFQELVDKLRDL 763 (783)
Q Consensus 736 ~~LI~~cL~~dP~~RPsa~ell~~L~~L 763 (783)
.+++.+||+++|.+||++.++++.|+++
T Consensus 239 ~~li~~~l~~~p~~Rp~~~~i~~~l~~~ 266 (267)
T cd05066 239 HQLMLDCWQKDRNERPKFEQIVSILDKL 266 (267)
T ss_pred HHHHHHHcccCchhCCCHHHHHHHHHhh
Confidence 9999999999999999999999998764
No 160
>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a
Probab=100.00 E-value=2.9e-37 Score=325.42 Aligned_cols=257 Identities=25% Similarity=0.442 Sum_probs=215.7
Q ss_pred cceeEeeeeccCCcEEEEEEEEe-CCceEEEEEEecccC-CHHHHHHHHHHHHHHHhCCCCceeeEeceeecCCceEEEE
Q 003963 505 EDLTIGEQIGQGSCGTVYHAVWY-GSQDVAVKVFSRQEY-SDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIVT 582 (783)
Q Consensus 505 ~~y~i~~~LG~G~fG~Vy~a~~~-~~~~vAiK~i~~~~~-~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lV~ 582 (783)
++|++.+.||+|+||.||+|.+. .++.||+|.++.... .......+.+|+.+++.++|+||+++++++...+..++||
T Consensus 2 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 81 (267)
T cd08224 2 GNFKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLDHPNVIKYLASFIENNELNIVL 81 (267)
T ss_pred CceeeeeeeccCCceEEEEEEEcCCCCEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEEE
Confidence 58999999999999999999987 567899999875433 3344678889999999999999999999999999999999
Q ss_pred EecCCCCHHHHHhh---cCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCcccccc
Q 003963 583 EFLPRGSLFRLLQR---NTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHET 659 (783)
Q Consensus 583 E~~~ggsL~~~L~~---~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~~~ 659 (783)
||+++++|..++.. ....+++..++.++.+|+.||.|||+.+ |+|+||||+||+++.++.++|+|||++......
T Consensus 82 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~--i~h~dl~p~nil~~~~~~~~l~d~~~~~~~~~~ 159 (267)
T cd08224 82 ELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEHMHSKR--IMHRDIKPANVFITATGVVKLGDLGLGRFFSSK 159 (267)
T ss_pred ecCCCCCHHHHHHHhcccCCCcCHHHHHHHHHHHHHHHHHHHhCC--EecCCcChhhEEECCCCcEEEeccceeeeccCC
Confidence 99999999999864 2345889999999999999999999998 999999999999999999999999998765443
Q ss_pred cccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCC--hHHHHHHhhcccccccCCC-CCCHHHH
Q 003963 660 YLTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLN--SMQVIGAVGFMNQRLEIPK-DVDPRWA 736 (783)
Q Consensus 660 ~~~~~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~elltG~~Pf~~~~--~~~~~~~i~~~~~~~~~~~-~~s~~l~ 736 (783)
........+++.|+|||.+.+..++.++|||||||++|+|++|..||.... .......+.. ......+. .++..+.
T Consensus 160 ~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 238 (267)
T cd08224 160 TTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEK-CDYPPLPADHYSEELR 238 (267)
T ss_pred CcccceecCCccccCHHHhccCCCCchhcHHHHHHHHHHHHHCCCCcccCCccHHHHHhhhhc-CCCCCCChhhcCHHHH
Confidence 333334568899999999999889999999999999999999999996543 2223333221 12233343 6788999
Q ss_pred HHHHHhhhhCCCCCCCHHHHHHHHHHHH
Q 003963 737 AIVESCWHSDPQCRPSFQELVDKLRDLQ 764 (783)
Q Consensus 737 ~LI~~cL~~dP~~RPsa~ell~~L~~L~ 764 (783)
++|.+||..+|.+||++.+|++.|..++
T Consensus 239 ~~i~~cl~~~p~~Rp~~~~il~~~~~~~ 266 (267)
T cd08224 239 DLVSRCINPDPEKRPDISYVLQVAKEMH 266 (267)
T ss_pred HHHHHHcCCCcccCCCHHHHHHHHHHhc
Confidence 9999999999999999999999988764
No 161
>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu
Probab=100.00 E-value=2.2e-37 Score=327.41 Aligned_cols=254 Identities=31% Similarity=0.535 Sum_probs=214.5
Q ss_pred eeEeeeeccCCcEEEEEEEEeC----CceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEeceeecCCc-----
Q 003963 507 LTIGEQIGQGSCGTVYHAVWYG----SQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQR----- 577 (783)
Q Consensus 507 y~i~~~LG~G~fG~Vy~a~~~~----~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~----- 577 (783)
|++.+.||+|+||.||+|.+.. ...||||++............+.+|+.+++.++||||+++++++.....
T Consensus 1 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 80 (273)
T cd05035 1 LKLGKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDFDHPNVMKLIGVCFEASSLQKIP 80 (273)
T ss_pred CccccccCcCCCceEEEEEEecCCCCcceEEEEEeccCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEeeeccCCccccCc
Confidence 5788999999999999998753 2569999998766555666788999999999999999999998865543
Q ss_pred -eEEEEEecCCCCHHHHHhhc-----CCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecC
Q 003963 578 -LCIVTEFLPRGSLFRLLQRN-----TTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFG 651 (783)
Q Consensus 578 -~~lV~E~~~ggsL~~~L~~~-----~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFG 651 (783)
.+++|||+++++|..++... ...+++..++.++.|++.||.|||+.+ |+||||||+||++++++.+||+|||
T Consensus 81 ~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH~~~--i~H~dlkp~Nil~~~~~~~kl~dfg 158 (273)
T cd05035 81 KPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLSNRN--FIHRDLAARNCMLREDMTVCVADFG 158 (273)
T ss_pred ccEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCC--eeccccchheEEECCCCeEEECCcc
Confidence 79999999999999998532 235889999999999999999999988 9999999999999999999999999
Q ss_pred CCccccccc--ccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCChHHHHHHhhcccccccCC
Q 003963 652 LSRLKHETY--LTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELAT-EKIPWDNLNSMQVIGAVGFMNQRLEIP 728 (783)
Q Consensus 652 la~~~~~~~--~~~~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~~~~ 728 (783)
+++...... .......++..|++||.+.+..++.++|||||||++|||++ |.+||......+....+.. ......+
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~SlG~il~el~~~g~~p~~~~~~~~~~~~~~~-~~~~~~~ 237 (273)
T cd05035 159 LSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGQTPYPGVENHEIYDYLRH-GNRLKQP 237 (273)
T ss_pred ceeeccccccccccccccCCccccCHhhcccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHc-CCCCCCC
Confidence 987543321 11222334678999999998889999999999999999999 9999988877776655532 3345567
Q ss_pred CCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHH
Q 003963 729 KDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDL 763 (783)
Q Consensus 729 ~~~s~~l~~LI~~cL~~dP~~RPsa~ell~~L~~L 763 (783)
..++.++.++|.+||..||.+||++.++++.|++|
T Consensus 238 ~~~~~~~~~li~~~l~~~p~~Rp~~~e~~~~l~~~ 272 (273)
T cd05035 238 EDCLDELYDLMYSCWRADPKDRPTFTKLREVLENI 272 (273)
T ss_pred cCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 78999999999999999999999999999998875
No 162
>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=100.00 E-value=7e-38 Score=334.08 Aligned_cols=256 Identities=27% Similarity=0.496 Sum_probs=215.4
Q ss_pred cccceeEeeeeccCCcEEEEEEEEeC------CceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEeceeecCC
Q 003963 503 LWEDLTIGEQIGQGSCGTVYHAVWYG------SQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQ 576 (783)
Q Consensus 503 ~~~~y~i~~~LG~G~fG~Vy~a~~~~------~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~ 576 (783)
...+|++.++||+|+||.||+|.+.. ++.||||++.... .......+.+|+.++..++||||+++++++....
T Consensus 3 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~ 81 (283)
T cd05091 3 NLSTVRFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKA-EGPLREEFKHEAMMRSRLQHPNIVCLLGVVTKEQ 81 (283)
T ss_pred CHHHHHHHHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCC-CHHHHHHHHHHHHHHhcCCCCCcCeEEEEEcCCC
Confidence 34578899999999999999998753 3569999987543 3345567889999999999999999999999999
Q ss_pred ceEEEEEecCCCCHHHHHhhc---------------CCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcC
Q 003963 577 RLCIVTEFLPRGSLFRLLQRN---------------TTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDK 641 (783)
Q Consensus 577 ~~~lV~E~~~ggsL~~~L~~~---------------~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~ 641 (783)
..++++||+.+++|.+++... ...+++..++.++.|++.||.|||+++ |+||||||+|||+++
T Consensus 82 ~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH~~g--i~H~dlkp~Nil~~~ 159 (283)
T cd05091 82 PLSMIFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLSSHH--VVHKDLATRNVLVFD 159 (283)
T ss_pred ceEEEEEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHcC--ccccccchhheEecC
Confidence 999999999999999998521 234788889999999999999999998 999999999999999
Q ss_pred CCcEEEEecCCCcccccccc--cccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCChHHHHHHh
Q 003963 642 HWTVKVGDFGLSRLKHETYL--TTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELAT-EKIPWDNLNSMQVIGAV 718 (783)
Q Consensus 642 ~~~vkL~DFGla~~~~~~~~--~~~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~ellt-G~~Pf~~~~~~~~~~~i 718 (783)
++.+||+|||+++....... ......+++.|+|||.+.+..++.++|||||||++|||++ |..||......+....+
T Consensus 160 ~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~i 239 (283)
T cd05091 160 KLNVKISDLGLFREVYAADYYKLMGNSLLPIRWMSPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVIEMI 239 (283)
T ss_pred CCceEecccccccccccchheeeccCccCCccccCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH
Confidence 99999999999875433221 1223345789999999988889999999999999999998 89999888777666655
Q ss_pred hcccccccCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHH
Q 003963 719 GFMNQRLEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRD 762 (783)
Q Consensus 719 ~~~~~~~~~~~~~s~~l~~LI~~cL~~dP~~RPsa~ell~~L~~ 762 (783)
... .....+..++..+.+|+..||+.+|.+||++.+|+..|+.
T Consensus 240 ~~~-~~~~~~~~~~~~~~~li~~cl~~~p~~RP~~~~i~~~l~~ 282 (283)
T cd05091 240 RNR-QVLPCPDDCPAWVYTLMLECWNEFPSRRPRFKDIHSRLRT 282 (283)
T ss_pred HcC-CcCCCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHHhhC
Confidence 432 2345677899999999999999999999999999988764
No 163
>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok
Probab=100.00 E-value=7.5e-38 Score=345.83 Aligned_cols=254 Identities=28% Similarity=0.350 Sum_probs=206.6
Q ss_pred cccceeEeeeeccCCcEEEEEEEEeC-CceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEeceeecC------
Q 003963 503 LWEDLTIGEQIGQGSCGTVYHAVWYG-SQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSP------ 575 (783)
Q Consensus 503 ~~~~y~i~~~LG~G~fG~Vy~a~~~~-~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~------ 575 (783)
..++|++.+.||+|+||.||++.+.. ++.||||++............+.+|+.+++.++||||+++++++...
T Consensus 15 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 94 (355)
T cd07874 15 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKSLEEF 94 (355)
T ss_pred hhhceeEEEEeeecCCEEEEEEEecCCCceEEEEEeCCcccChHHHHHHHHHHHHHHHhCCCchhceeeeeecccccccc
Confidence 45799999999999999999998754 56799999976655555567788899999999999999999988643
Q ss_pred CceEEEEEecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCcc
Q 003963 576 QRLCIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRL 655 (783)
Q Consensus 576 ~~~~lV~E~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~ 655 (783)
..+|+||||+++ +|.+.+.. .+++..+..++.||+.||.|||+++ |+||||||+||||+.++.+||+|||+++.
T Consensus 95 ~~~~lv~e~~~~-~l~~~~~~---~l~~~~~~~~~~qi~~aL~~LH~~g--ivHrDikp~Nill~~~~~~kl~Dfg~~~~ 168 (355)
T cd07874 95 QDVYLVMELMDA-NLCQVIQM---ELDHERMSYLLYQMLCGIKHLHSAG--IIHRDLKPSNIVVKSDCTLKILDFGLART 168 (355)
T ss_pred ceeEEEhhhhcc-cHHHHHhh---cCCHHHHHHHHHHHHHHHHHHHhCC--cccCCCChHHEEECCCCCEEEeeCccccc
Confidence 347999999965 77777753 3788889999999999999999998 99999999999999999999999999976
Q ss_pred cccccccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccc-------------
Q 003963 656 KHETYLTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMN------------- 722 (783)
Q Consensus 656 ~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~elltG~~Pf~~~~~~~~~~~i~~~~------------- 722 (783)
..... ......||+.|+|||++.+..++.++|||||||++|+|++|+.||...+.......+....
T Consensus 169 ~~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (355)
T cd07874 169 AGTSF-MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQP 247 (355)
T ss_pred CCCcc-ccCCccccCCccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhcH
Confidence 54432 2234578999999999999999999999999999999999999998766443322110000
Q ss_pred -------c--------------------cccCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhh
Q 003963 723 -------Q--------------------RLEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQ 769 (783)
Q Consensus 723 -------~--------------------~~~~~~~~s~~l~~LI~~cL~~dP~~RPsa~ell~~L~~L~~~~f~ 769 (783)
. ....+...+.++.+||.+||..||.+|||+.++ |+|+||+
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rps~~el------l~hp~~~ 315 (355)
T cd07874 248 TVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDEA------LQHPYIN 315 (355)
T ss_pred HHHHHHhcCCccccccchhhccccccccccccccccchHHHHHHHHHhcCCchhcCCHHHH------hcCcchh
Confidence 0 000112245678999999999999999999999 6788886
No 164
>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.5e-39 Score=350.66 Aligned_cols=256 Identities=31% Similarity=0.462 Sum_probs=220.4
Q ss_pred cceeEeeeeccCCcEEEEEEEEeCC-ceEEEEEEecccC-CHHHHHHHHHHHHHHHhCCCCceeeEeceeecCCceEEEE
Q 003963 505 EDLTIGEQIGQGSCGTVYHAVWYGS-QDVAVKVFSRQEY-SDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIVT 582 (783)
Q Consensus 505 ~~y~i~~~LG~G~fG~Vy~a~~~~~-~~vAiK~i~~~~~-~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lV~ 582 (783)
+.|.-++.||.|+||.||.|++..+ +.||||++..... +.+--+.+..|+.+|+.|+|||+|.+-++|-.+...||||
T Consensus 26 klf~dLrEIGHGSFGAVYfArd~~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l~HPntieYkgCyLre~TaWLVM 105 (948)
T KOG0577|consen 26 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQLRHPNTIEYKGCYLREHTAWLVM 105 (948)
T ss_pred HHHHHHHHhcCCccceeEEeeccCccceeeeeeccccccccHHHHHHHHHHHHHHHhccCCCcccccceeeccchHHHHH
Confidence 3466678899999999999998654 6699999976543 3344467888999999999999999999999999999999
Q ss_pred EecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCccccccccc
Q 003963 583 EFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETYLT 662 (783)
Q Consensus 583 E~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~~~ 662 (783)
||| -|+-.+++.-++.++.+-.+..|+.+.+.||+|||+++ .||||||..|||+++.|.|||+|||.+.....
T Consensus 106 EYC-lGSAsDlleVhkKplqEvEIAAi~~gaL~gLaYLHS~~--~IHRDiKAGNILLse~g~VKLaDFGSAsi~~P---- 178 (948)
T KOG0577|consen 106 EYC-LGSASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHN--RIHRDIKAGNILLSEPGLVKLADFGSASIMAP---- 178 (948)
T ss_pred HHH-hccHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHhh--HHhhhccccceEecCCCeeeeccccchhhcCc----
Confidence 999 56999999888888999999999999999999999999 99999999999999999999999999865443
Q ss_pred ccCCCCCCcccCccccc---CCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhcccccccCCCCCCHHHHHHH
Q 003963 663 TKTGKGTPQWMAPEVLR---NEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAAIV 739 (783)
Q Consensus 663 ~~~~~Gt~~Y~aPE~~~---~~~~s~~sDIwSLG~il~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~l~~LI 739 (783)
..+++|||.|||||++. .+.|+-++||||||++..||...++|+-+++.+..+..|.......-....|+..+..|+
T Consensus 179 AnsFvGTPywMAPEVILAMDEGqYdgkvDvWSLGITCIELAERkPPlFnMNAMSALYHIAQNesPtLqs~eWS~~F~~Fv 258 (948)
T KOG0577|consen 179 ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPTLQSNEWSDYFRNFV 258 (948)
T ss_pred hhcccCCccccchhHheeccccccCCccceeeccchhhhhhhcCCCccCchHHHHHHHHHhcCCCCCCCchhHHHHHHHH
Confidence 34789999999999976 466899999999999999999999999999999888887533333333457899999999
Q ss_pred HHhhhhCCCCCCCHHHHHHHHHHHHHHHhhcCcC
Q 003963 740 ESCWHSDPQCRPSFQELVDKLRDLQRQYFQASRS 773 (783)
Q Consensus 740 ~~cL~~dP~~RPsa~ell~~L~~L~~~~f~~~~~ 773 (783)
..||++-|.+|||..++ |.|.|....|+
T Consensus 259 d~CLqKipqeRptse~l------l~H~fv~R~Rp 286 (948)
T KOG0577|consen 259 DSCLQKIPQERPTSEEL------LKHRFVLRERP 286 (948)
T ss_pred HHHHhhCcccCCcHHHH------hhcchhccCCC
Confidence 99999999999999999 55666655554
No 165
>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n
Probab=100.00 E-value=3.1e-37 Score=331.04 Aligned_cols=259 Identities=31% Similarity=0.529 Sum_probs=217.8
Q ss_pred cccceeEeeeeccCCcEEEEEEEEeC------CceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEeceeecCC
Q 003963 503 LWEDLTIGEQIGQGSCGTVYHAVWYG------SQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQ 576 (783)
Q Consensus 503 ~~~~y~i~~~LG~G~fG~Vy~a~~~~------~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~ 576 (783)
...+|.+.+.||+|+||.||++.+.. ...+++|.+.... ......+.+|+.+++.++||||+++++++....
T Consensus 3 ~~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~ 80 (291)
T cd05094 3 KRRDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPT--LAARKDFQREAELLTNLQHEHIVKFYGVCGDGD 80 (291)
T ss_pred chHHeEEeeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCcc--HHHHHHHHHHHHHHhcCCCCCcceEEEEEccCC
Confidence 35689999999999999999998542 2358888875433 233467889999999999999999999999999
Q ss_pred ceEEEEEecCCCCHHHHHhhcC---------------CcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcC
Q 003963 577 RLCIVTEFLPRGSLFRLLQRNT---------------TKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDK 641 (783)
Q Consensus 577 ~~~lV~E~~~ggsL~~~L~~~~---------------~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~ 641 (783)
..++||||+++++|.+++..+. ..+++..++.++.||+.||+|||+++ |+||||||+|||++.
T Consensus 81 ~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~--i~H~dlkp~Nil~~~ 158 (291)
T cd05094 81 PLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQH--FVHRDLATRNCLVGA 158 (291)
T ss_pred ceEEEEecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHHhCC--eeecccCcceEEEcc
Confidence 9999999999999999996532 34788999999999999999999998 999999999999999
Q ss_pred CCcEEEEecCCCccccccc--ccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCChHHHHHHh
Q 003963 642 HWTVKVGDFGLSRLKHETY--LTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELAT-EKIPWDNLNSMQVIGAV 718 (783)
Q Consensus 642 ~~~vkL~DFGla~~~~~~~--~~~~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~ellt-G~~Pf~~~~~~~~~~~i 718 (783)
++.++|+|||++....... .......++..|+|||.+.+..++.++|||||||++|+|++ |..||...+.......+
T Consensus 159 ~~~~~l~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~ 238 (291)
T cd05094 159 NLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSNTEVIECI 238 (291)
T ss_pred CCcEEECCCCcccccCCCceeecCCCCCcceeecChHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHH
Confidence 9999999999987543321 11223456788999999999999999999999999999999 99999888776665554
Q ss_pred hcccccccCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHH
Q 003963 719 GFMNQRLEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQ 766 (783)
Q Consensus 719 ~~~~~~~~~~~~~s~~l~~LI~~cL~~dP~~RPsa~ell~~L~~L~~~ 766 (783)
. .......+..++..+.+|+.+||+.+|.+||++.++++.|+++...
T Consensus 239 ~-~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~v~~~l~~~~~~ 285 (291)
T cd05094 239 T-QGRVLERPRVCPKEVYDIMLGCWQREPQQRLNIKEIYKILHALGKA 285 (291)
T ss_pred h-CCCCCCCCccCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHHhh
Confidence 3 2233345667889999999999999999999999999999998664
No 166
>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes. Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an
Probab=100.00 E-value=3.1e-37 Score=325.19 Aligned_cols=255 Identities=33% Similarity=0.593 Sum_probs=214.1
Q ss_pred cccccceeEeeeeccCCcEEEEEEEEeCCceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEeceeecCCceEE
Q 003963 501 EILWEDLTIGEQIGQGSCGTVYHAVWYGSQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCI 580 (783)
Q Consensus 501 e~~~~~y~i~~~LG~G~fG~Vy~a~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~l 580 (783)
++..++|.+.++||.|+||.||++.+..+..+|+|++...... ...+.+|+.+++.++||||+++++++. .+..++
T Consensus 2 ~~~~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~lK~~~~~~~~---~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~ 77 (260)
T cd05069 2 EIPRESLRLDVKLGQGCFGEVWMGTWNGTTKVAIKTLKPGTMM---PEAFLQEAQIMKKLRHDKLVPLYAVVS-EEPIYI 77 (260)
T ss_pred cCChHHeeeeeeecCcCCCeEEEEEEcCCceEEEEEcccCCcc---HHHHHHHHHHHHhCCCCCeeeEEEEEc-CCCcEE
Confidence 4455789999999999999999999877778999987654432 356788999999999999999999875 456899
Q ss_pred EEEecCCCCHHHHHhhc-CCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCcccccc
Q 003963 581 VTEFLPRGSLFRLLQRN-TTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHET 659 (783)
Q Consensus 581 V~E~~~ggsL~~~L~~~-~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~~~ 659 (783)
+|||+++++|.+++... ...+++..+..++.|++.||.|||+.+ |+|+||||+||++++++.++|+|||++......
T Consensus 78 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~--i~H~dl~~~Nill~~~~~~~l~dfg~~~~~~~~ 155 (260)
T cd05069 78 VTEFMGKGSLLDFLKEGDGKYLKLPQLVDMAAQIADGMAYIERMN--YIHRDLRAANILVGDNLVCKIADFGLARLIEDN 155 (260)
T ss_pred EEEcCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCC--EeecccCcceEEEcCCCeEEECCCccceEccCC
Confidence 99999999999999753 334788999999999999999999998 999999999999999999999999999765432
Q ss_pred cc-cccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCChHHHHHHhhcccccccCCCCCCHHHHH
Q 003963 660 YL-TTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELAT-EKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAA 737 (783)
Q Consensus 660 ~~-~~~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~l~~ 737 (783)
.. ......++..|+|||.+.+..++.++|||||||++|+|++ |..||...........+.. ......+..++..+.+
T Consensus 156 ~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 234 (260)
T cd05069 156 EYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMVNREVLEQVER-GYRMPCPQGCPESLHE 234 (260)
T ss_pred cccccCCCccchhhCCHHHhccCCcChHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHc-CCCCCCCcccCHHHHH
Confidence 21 1122345678999999998889999999999999999999 9999988777665554432 2334556778999999
Q ss_pred HHHHhhhhCCCCCCCHHHHHHHHHH
Q 003963 738 IVESCWHSDPQCRPSFQELVDKLRD 762 (783)
Q Consensus 738 LI~~cL~~dP~~RPsa~ell~~L~~ 762 (783)
++.+||.+||.+||+++++++.|++
T Consensus 235 li~~~l~~~p~~Rp~~~~i~~~l~~ 259 (260)
T cd05069 235 LMKLCWKKDPDERPTFEYIQSFLED 259 (260)
T ss_pred HHHHHccCCcccCcCHHHHHHHHhc
Confidence 9999999999999999999988764
No 167
>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati
Probab=100.00 E-value=1.9e-37 Score=325.35 Aligned_cols=250 Identities=26% Similarity=0.438 Sum_probs=214.9
Q ss_pred ceeEeeeeccCCcEEEEEEEEeC-CceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEeceeecCCceEEEEEe
Q 003963 506 DLTIGEQIGQGSCGTVYHAVWYG-SQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIVTEF 584 (783)
Q Consensus 506 ~y~i~~~LG~G~fG~Vy~a~~~~-~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lV~E~ 584 (783)
+|++.++||.|+||.||++.+.. ++.||+|.+..... ....+.+..|+.+++.++||||+++++.+...+.+|++|||
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 79 (255)
T cd08219 1 QYNVLRVVGEGSFGRALLVQHVNSDQKYAMKEIRLPKS-SSAVEDSRKEAVLLAKMKHPNIVAFKESFEADGHLYIVMEY 79 (255)
T ss_pred CceEEEEeeccCCeEEEEEEEcCCCceEEEEEEEcCcc-hHHHHHHHHHHHHHHhCCCCCcceEEEEEEECCEEEEEEee
Confidence 58899999999999999999864 57799999865442 34456788899999999999999999999999999999999
Q ss_pred cCCCCHHHHHhh-cCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCcccccccccc
Q 003963 585 LPRGSLFRLLQR-NTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETYLTT 663 (783)
Q Consensus 585 ~~ggsL~~~L~~-~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~~~~ 663 (783)
+++++|.+++.. ....+++..++.++.||+.||.|||+++ |+|+||||+||+++.++.++|+|||++..........
T Consensus 80 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~--i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~~~ 157 (255)
T cd08219 80 CDGGDLMQKIKLQRGKLFPEDTILQWFVQMCLGVQHIHEKR--VLHRDIKSKNIFLTQNGKVKLGDFGSARLLTSPGAYA 157 (255)
T ss_pred CCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHhhCC--cccCCCCcceEEECCCCcEEEcccCcceeeccccccc
Confidence 999999998864 3345789999999999999999999998 9999999999999999999999999987655443333
Q ss_pred cCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhcccccccCCCCCCHHHHHHHHHhh
Q 003963 664 KTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAAIVESCW 743 (783)
Q Consensus 664 ~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~l~~LI~~cL 743 (783)
....|++.|+|||++.+..++.++|+||||+++|+|++|..||...+.......+. ......++..++..+.+||.+||
T Consensus 158 ~~~~~~~~~~aPE~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~li~~~l 236 (255)
T cd08219 158 CTYVGTPYYVPPEIWENMPYNNKSDIWSLGCILYELCTLKHPFQANSWKNLILKVC-QGSYKPLPSHYSYELRSLIKQMF 236 (255)
T ss_pred ccccCCccccCHHHHccCCcCchhhhhhhchhheehhhccCCCCCCCHHHHHHHHh-cCCCCCCCcccCHHHHHHHHHHH
Confidence 34568999999999999889999999999999999999999998877666554443 22344566778999999999999
Q ss_pred hhCCCCCCCHHHHHHH
Q 003963 744 HSDPQCRPSFQELVDK 759 (783)
Q Consensus 744 ~~dP~~RPsa~ell~~ 759 (783)
..||.+||++.+++..
T Consensus 237 ~~~P~~Rp~~~~il~~ 252 (255)
T cd08219 237 KRNPRSRPSATTILSR 252 (255)
T ss_pred hCCcccCCCHHHHhhc
Confidence 9999999999999754
No 168
>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou
Probab=100.00 E-value=6.7e-38 Score=334.87 Aligned_cols=253 Identities=27% Similarity=0.336 Sum_probs=201.6
Q ss_pred ceeEeeeeccCCcEEEEEEEEeC-CceEEEEEEecccCCHHHHHHHHHHHHHHHhC---CCCceeeEeceeec-----CC
Q 003963 506 DLTIGEQIGQGSCGTVYHAVWYG-SQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRL---RHPNVLLFMGAVTS-----PQ 576 (783)
Q Consensus 506 ~y~i~~~LG~G~fG~Vy~a~~~~-~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l---~HpnIv~l~~~~~~-----~~ 576 (783)
+|++.+.||+|+||.||+|.+.. ++.||+|++............+.+|+.+++.+ +||||+++++++.. ..
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~~~~~~ 80 (288)
T cd07863 1 QYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNEDGLPLSTVREVALLKRLEAFDHPNIVRLMDVCATSRTDRET 80 (288)
T ss_pred CceEeeEEeecCCeEEEEEEECCCCcEEEEEEeccCcCCCCCchHHHHHHHHHHHhhhcCCCCeeeeeeeeccccCCCCc
Confidence 58899999999999999999865 56799999876433322223455677777665 69999999998764 24
Q ss_pred ceEEEEEecCCCCHHHHHhhcC-CcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCcc
Q 003963 577 RLCIVTEFLPRGSLFRLLQRNT-TKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRL 655 (783)
Q Consensus 577 ~~~lV~E~~~ggsL~~~L~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~ 655 (783)
.++++|||+++ +|.+++.... ..+++..++.++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||++..
T Consensus 81 ~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~--ivH~dikp~Nili~~~~~~kl~dfg~~~~ 157 (288)
T cd07863 81 KVTLVFEHVDQ-DLRTYLDKVPPPGLPAETIKDLMRQFLRGLDFLHANC--IVHRDLKPENILVTSGGQVKLADFGLARI 157 (288)
T ss_pred eEEEEEccccc-CHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC--eecCCCCHHHEEECCCCCEEECccCcccc
Confidence 58999999964 8988886533 34899999999999999999999998 99999999999999999999999999876
Q ss_pred cccccccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhcccc---------c--
Q 003963 656 KHETYLTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQ---------R-- 724 (783)
Q Consensus 656 ~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~elltG~~Pf~~~~~~~~~~~i~~~~~---------~-- 724 (783)
..... ......|++.|+|||++.+..++.++|||||||++|+|++|++||........+..+..... .
T Consensus 158 ~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (288)
T cd07863 158 YSCQM-ALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRDVT 236 (288)
T ss_pred ccCcc-cCCCccccccccCchHhhCCCCCCcchhhhHHHHHHHHHhCCcCcCCCCHHHHHHHHHHHhCCCChhhCccccc
Confidence 54332 22234679999999999998999999999999999999999999987765544333211100 0
Q ss_pred --------------ccCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHh
Q 003963 725 --------------LEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYF 768 (783)
Q Consensus 725 --------------~~~~~~~s~~l~~LI~~cL~~dP~~RPsa~ell~~L~~L~~~~f 768 (783)
......++..+.+||.+||+.||.+|||+.++ +.|+||
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~~~------l~hp~f 288 (288)
T cd07863 237 LPRGAFSPRGPRPVQSVVPEIEESGAQLLLEMLTFNPHKRISAFRA------LQHPFF 288 (288)
T ss_pred ccccccCCCCCCchHHhCcCcCHHHHHHHHHHhccCcccCCCHHHH------hcCCCC
Confidence 01123567889999999999999999999999 567776
No 169
>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D
Probab=100.00 E-value=1.7e-37 Score=348.13 Aligned_cols=263 Identities=29% Similarity=0.491 Sum_probs=218.9
Q ss_pred cccccccceeEeeeeccCCcEEEEEEEEeC------CceEEEEEEecccCCHHHHHHHHHHHHHHHhCC-CCceeeEece
Q 003963 499 DYEILWEDLTIGEQIGQGSCGTVYHAVWYG------SQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLR-HPNVLLFMGA 571 (783)
Q Consensus 499 ~~e~~~~~y~i~~~LG~G~fG~Vy~a~~~~------~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~-HpnIv~l~~~ 571 (783)
.|++..++|.+.++||+|+||.||+|.+.+ +..||||++..... ....+.+.+|+.+|..+. |||||+++++
T Consensus 31 ~~~~~~~~~~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~-~~~~~~~~~E~~~l~~l~~H~niv~~~~~ 109 (401)
T cd05107 31 AWEMPRDNLVLGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTAR-SSEKQALMSELKIMSHLGPHLNIVNLLGA 109 (401)
T ss_pred cceecHHHeehhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCCC-hhHHHHHHHHHHHHHhcCCCCCeEEEEEE
Confidence 467788899999999999999999998642 34699999976433 334457889999999997 9999999999
Q ss_pred eecCCceEEEEEecCCCCHHHHHhhcC-----------------------------------------------------
Q 003963 572 VTSPQRLCIVTEFLPRGSLFRLLQRNT----------------------------------------------------- 598 (783)
Q Consensus 572 ~~~~~~~~lV~E~~~ggsL~~~L~~~~----------------------------------------------------- 598 (783)
+...+.+++|||||++|+|.+++.++.
T Consensus 110 ~~~~~~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (401)
T cd05107 110 CTKGGPIYIITEYCRYGDLVDYLHRNKHTFLQYYLDKNRDDGSLISGGSTPLSQRKSHVSLGSESDGGYMDMSKDESADY 189 (401)
T ss_pred EccCCCcEEEEeccCCCcHHHHHHhccccchhhhcccccccccccccccccccccccchhhhhccCccccccCCccccCc
Confidence 999999999999999999999996532
Q ss_pred --------------------------------------------CcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCC
Q 003963 599 --------------------------------------------TKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKS 634 (783)
Q Consensus 599 --------------------------------------------~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp 634 (783)
..+++..++.++.||+.||.|||+.+ |+||||||
T Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~--ivHrdlkp 267 (401)
T cd05107 190 VPMQDMKGTVKYADIESSNYESPYDQYLPSAPERTRRDTLINESPALSYMDLVGFSYQVANGMEFLASKN--CVHRDLAA 267 (401)
T ss_pred cchhcchhhhhhhhhhccCcCCchhhhhcccCCCcchhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCC--cCcccCCc
Confidence 12566778889999999999999988 99999999
Q ss_pred CCEEEcCCCcEEEEecCCCccccccc--ccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCCh
Q 003963 635 SNLLVDKHWTVKVGDFGLSRLKHETY--LTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELAT-EKIPWDNLNS 711 (783)
Q Consensus 635 ~NILl~~~~~vkL~DFGla~~~~~~~--~~~~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~ellt-G~~Pf~~~~~ 711 (783)
+|||++.++.+||+|||+++...... .......+++.|+|||.+.+..++.++|||||||++|||++ |..||.....
T Consensus 268 ~NiLl~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~e~l~~g~~P~~~~~~ 347 (401)
T cd05107 268 RNVLICEGKLVKICDFGLARDIMRDSNYISKGSTFLPLKWMAPESIFNNLYTTLSDVWSFGILLWEIFTLGGTPYPELPM 347 (401)
T ss_pred ceEEEeCCCEEEEEecCcceecccccccccCCCcCCCCceeChHHhcCCCCCcHhHHHHHHHHHHHHHHcCCCCCCCCCc
Confidence 99999999999999999987543221 11223356789999999998889999999999999999998 8999987665
Q ss_pred HHHHHHhhcccccccCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHH
Q 003963 712 MQVIGAVGFMNQRLEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQ 764 (783)
Q Consensus 712 ~~~~~~i~~~~~~~~~~~~~s~~l~~LI~~cL~~dP~~RPsa~ell~~L~~L~ 764 (783)
.+..............|..++.++.+||.+||..+|.+||++.+|++.|+++.
T Consensus 348 ~~~~~~~~~~~~~~~~p~~~~~~l~~li~~cl~~~P~~RPs~~ell~~L~~~~ 400 (401)
T cd05107 348 NEQFYNAIKRGYRMAKPAHASDEIYEIMQKCWEEKFEIRPDFSQLVHLVGDLL 400 (401)
T ss_pred hHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHh
Confidence 55433332233345567778999999999999999999999999999998764
No 170
>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.
Probab=100.00 E-value=1.3e-37 Score=328.77 Aligned_cols=258 Identities=23% Similarity=0.409 Sum_probs=215.5
Q ss_pred cceeEeeeeccCCcEEEEEEEEe-CCceEEEEEEecccC-CHHHHHHHHHHHHHHHhCCCCceeeEeceeecCCceEEEE
Q 003963 505 EDLTIGEQIGQGSCGTVYHAVWY-GSQDVAVKVFSRQEY-SDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIVT 582 (783)
Q Consensus 505 ~~y~i~~~LG~G~fG~Vy~a~~~-~~~~vAiK~i~~~~~-~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lV~ 582 (783)
.+|++.+.||.|+||.||++.+. .++.|+||.+..... .......+.+|+.+++.++||||+++++++..++..+++|
T Consensus 2 ~~y~~~~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~ 81 (267)
T cd08229 2 ANFRIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVL 81 (267)
T ss_pred chhhhhhhhcccCCeEEEEEeecCCCceEEEEeeeehhhhhHHHHHHHHHHHHHHHHccCCchhhhhheeEeCCeEEEEE
Confidence 57889999999999999999975 567899998865443 3345567889999999999999999999999999999999
Q ss_pred EecCCCCHHHHHhh---cCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCcccccc
Q 003963 583 EFLPRGSLFRLLQR---NTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHET 659 (783)
Q Consensus 583 E~~~ggsL~~~L~~---~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~~~ 659 (783)
||+++++|.+++.. ....+++..++.++.||+.||.|||+++ ++|+||||+||+++.++.++|+|||++......
T Consensus 82 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~--i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~ 159 (267)
T cd08229 82 ELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHMHSRR--VMHRDIKPANVFITATGVVKLGDLGLGRFFSSK 159 (267)
T ss_pred EecCCCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHCC--eecCCCCHHHEEEcCCCCEEECcchhhhccccC
Confidence 99999999998863 2345899999999999999999999998 999999999999999999999999998765543
Q ss_pred cccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCCh--HHHHHHhhcccccccCCCCCCHHHHH
Q 003963 660 YLTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNS--MQVIGAVGFMNQRLEIPKDVDPRWAA 737 (783)
Q Consensus 660 ~~~~~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~elltG~~Pf~~~~~--~~~~~~i~~~~~~~~~~~~~s~~l~~ 737 (783)
........|+..|+|||.+.+..++.++|+||||+++|+|++|..||..... ......+.........+..+++.+.+
T Consensus 160 ~~~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (267)
T cd08229 160 TTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQCDYPPLPSDHYSEELRQ 239 (267)
T ss_pred CcccccccCCcCccCHHHhcCCCccchhhHHHHHHHHHHHHhCCCCcccccchHHHHhhhhhcCCCCCCCcccccHHHHH
Confidence 3333345688999999999998899999999999999999999999965433 22222332222222233457889999
Q ss_pred HHHHhhhhCCCCCCCHHHHHHHHHHHH
Q 003963 738 IVESCWHSDPQCRPSFQELVDKLRDLQ 764 (783)
Q Consensus 738 LI~~cL~~dP~~RPsa~ell~~L~~L~ 764 (783)
+|.+||..+|.+|||+.+|++.+++++
T Consensus 240 li~~~l~~~p~~Rpt~~~i~~~~~~~~ 266 (267)
T cd08229 240 LVNMCINPDPEKRPDITYVYDVAKRMH 266 (267)
T ss_pred HHHHhcCCCcccCCCHHHHHHHHhhhc
Confidence 999999999999999999999998774
No 171
>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan
Probab=100.00 E-value=2.3e-37 Score=324.07 Aligned_cols=247 Identities=35% Similarity=0.634 Sum_probs=215.7
Q ss_pred eeeccCCcEEEEEEEEeC----CceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEeceeecCCceEEEEEecC
Q 003963 511 EQIGQGSCGTVYHAVWYG----SQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIVTEFLP 586 (783)
Q Consensus 511 ~~LG~G~fG~Vy~a~~~~----~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lV~E~~~ 586 (783)
++||+|+||.||++.+.. ...|++|++....... ....+.+|+.+++.++|+||+++++++.....++++|||++
T Consensus 1 ~~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~-~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~ 79 (262)
T cd00192 1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEE-ERKDFLKEARVMKKLGHPNVVRLLGVCTEEEPLYLVLEYME 79 (262)
T ss_pred CccccCCceEEEEEEEecCCCCCceEEeEeeccccchh-HHHHHHHHHHHHhhcCCCChheeeeeecCCCceEEEEEecc
Confidence 469999999999999864 5679999987655433 46788899999999999999999999999999999999999
Q ss_pred CCCHHHHHhhc--------CCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCccccc
Q 003963 587 RGSLFRLLQRN--------TTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHE 658 (783)
Q Consensus 587 ggsL~~~L~~~--------~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~~ 658 (783)
+++|.+++... ...+++..++.++.|++.||+|||+++ |+|+||||+||+++.++.++|+|||.+.....
T Consensus 80 ~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~--i~H~di~p~nili~~~~~~~l~dfg~~~~~~~ 157 (262)
T cd00192 80 GGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLASKK--FVHRDLAARNCLVGEDLVVKISDFGLSRDVYD 157 (262)
T ss_pred CCcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHHcCC--cccCccCcceEEECCCCcEEEccccccccccc
Confidence 99999999875 467999999999999999999999988 99999999999999999999999999976654
Q ss_pred cc--ccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCChHHHHHHhhcccccccCCCCCCHHH
Q 003963 659 TY--LTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELAT-EKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRW 735 (783)
Q Consensus 659 ~~--~~~~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~l 735 (783)
.. .......+++.|+|||.+.+..++.++|||||||++|+|++ |..||......+....+.. ......+..+++++
T Consensus 158 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 236 (262)
T cd00192 158 DDYYRKKTGGKLPIRWMAPESLKDGIFTSKSDVWSFGVLLWEIFTLGATPYPGLSNEEVLEYLRK-GYRLPKPEYCPDEL 236 (262)
T ss_pred ccccccccCCCcCccccCHHHhccCCcchhhccHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHc-CCCCCCCccCChHH
Confidence 32 22334567889999999998889999999999999999999 6999998887776666543 44556777889999
Q ss_pred HHHHHHhhhhCCCCCCCHHHHHHHHH
Q 003963 736 AAIVESCWHSDPQCRPSFQELVDKLR 761 (783)
Q Consensus 736 ~~LI~~cL~~dP~~RPsa~ell~~L~ 761 (783)
.++|.+||..+|.+||++.++++.|+
T Consensus 237 ~~li~~~l~~~p~~Rps~~~l~~~l~ 262 (262)
T cd00192 237 YELMLSCWQLDPEDRPTFSELVERLE 262 (262)
T ss_pred HHHHHHHccCCcccCcCHHHHHHhhC
Confidence 99999999999999999999988763
No 172
>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=6e-38 Score=369.51 Aligned_cols=263 Identities=30% Similarity=0.573 Sum_probs=228.7
Q ss_pred ccccceeEeeeeccCCcEEEEEEEEeCC------ceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEeceeecC
Q 003963 502 ILWEDLTIGEQIGQGSCGTVYHAVWYGS------QDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSP 575 (783)
Q Consensus 502 ~~~~~y~i~~~LG~G~fG~Vy~a~~~~~------~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~ 575 (783)
+..+..++...||+|.||.||+|...+. ..||||.+.+.. +......|.+|..+|+.++|||||+++|++...
T Consensus 689 v~~~~v~l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~~-~~~~~~~Fl~Ea~~m~~f~HpNiv~liGv~l~~ 767 (1025)
T KOG1095|consen 689 VPRKNVTLLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRLS-SEQEVSDFLKEALLMSKFDHPNIVSLIGVCLDS 767 (1025)
T ss_pred CChhheEeeeeeccccccceEEEEEecCCCCccceEEEEEeccccC-CHHHHHHHHHHHHHHhcCCCcceeeEEEeecCC
Confidence 3456788999999999999999987542 138999886644 455678899999999999999999999999999
Q ss_pred CceEEEEEecCCCCHHHHHhhc------CCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEe
Q 003963 576 QRLCIVTEFLPRGSLFRLLQRN------TTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGD 649 (783)
Q Consensus 576 ~~~~lV~E~~~ggsL~~~L~~~------~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~D 649 (783)
...+|++|||.||+|..+|++. ...+.....+.++.+|++|+.||++++ +|||||..+|+||+....|||+|
T Consensus 768 ~~~~i~leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe~~~--fvHRDLAaRNCLL~~~r~VKIaD 845 (1025)
T KOG1095|consen 768 GPPLILLEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLESKH--FVHRDLAARNCLLDERRVVKIAD 845 (1025)
T ss_pred CCcEEEehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHHhCC--CcCcchhhhheeecccCcEEEcc
Confidence 9999999999999999999876 566899999999999999999999988 99999999999999999999999
Q ss_pred cCCCcc-cccccccccCC-CCCCcccCcccccCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCChHHHHHHhhccccccc
Q 003963 650 FGLSRL-KHETYLTTKTG-KGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELAT-EKIPWDNLNSMQVIGAVGFMNQRLE 726 (783)
Q Consensus 650 FGla~~-~~~~~~~~~~~-~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~~ 726 (783)
||+|+. +...+...... .-...|||||.+....++.|+|||||||+|||+++ |..||...+..+++..+... .+++
T Consensus 846 FGlArDiy~~~yyr~~~~a~lPvkWm~PEsl~d~iFtskSDvWsFGVllWEifslG~~PY~~~~n~~v~~~~~~g-gRL~ 924 (1025)
T KOG1095|consen 846 FGLARDIYDKDYYRKHGEAMLPVKWMPPESLKDGIFTSKSDVWSFGVLLWEIFSLGATPYPSRSNFEVLLDVLEG-GRLD 924 (1025)
T ss_pred cchhHhhhhchheeccCccccceecCCHHHHhhcccccccchhhhHHHHHHHHhCCCCCCCCcchHHHHHHHHhC-CccC
Confidence 999983 33333222222 33569999999999999999999999999999999 99999999999888755434 4899
Q ss_pred CCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHh
Q 003963 727 IPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYF 768 (783)
Q Consensus 727 ~~~~~s~~l~~LI~~cL~~dP~~RPsa~ell~~L~~L~~~~f 768 (783)
.|..++..+.++|..||+.+|++||++..|++.+..+...+.
T Consensus 925 ~P~~CP~~ly~lM~~CW~~~pe~RP~F~~i~~q~~~i~~~~~ 966 (1025)
T KOG1095|consen 925 PPSYCPEKLYQLMLQCWKHDPEDRPSFRTIVEQDPAISNAAL 966 (1025)
T ss_pred CCCCCChHHHHHHHHHccCChhhCccHHHHHhhhhhhhhhhc
Confidence 999999999999999999999999999999998877765543
No 173
>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2
Probab=100.00 E-value=1.3e-37 Score=331.82 Aligned_cols=254 Identities=28% Similarity=0.362 Sum_probs=206.0
Q ss_pred ceeEeeeeccCCcEEEEEEEEeC-CceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEeceeecCCceEEEEEe
Q 003963 506 DLTIGEQIGQGSCGTVYHAVWYG-SQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIVTEF 584 (783)
Q Consensus 506 ~y~i~~~LG~G~fG~Vy~a~~~~-~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lV~E~ 584 (783)
+|++.+.||.|+||.||+|.+.. +..||||++............+.+|+.+++.++||||+++++++..+..+|+||||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 80 (285)
T cd07861 1 DYTKIEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEEEGVPSTAIREISLLKELQHPNIVCLQDVLMQESRLYLIFEF 80 (285)
T ss_pred CceEeeEecccCceEEEEEEECCCCcEEEEEEeccccccCCchHHHHHHHHHHHhcCCCCEeeeEEEEeeCCeEEEEEec
Confidence 58899999999999999999864 57899999876543333445678899999999999999999999999999999999
Q ss_pred cCCCCHHHHHhhcC--CcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCccccccccc
Q 003963 585 LPRGSLFRLLQRNT--TKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETYLT 662 (783)
Q Consensus 585 ~~ggsL~~~L~~~~--~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~~~ 662 (783)
++ ++|.+++.... ..+++..++.++.||+.||+|||+++ |+|+||||+|||++.++.++|+|||++.........
T Consensus 81 ~~-~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~--i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~ 157 (285)
T cd07861 81 LS-MDLKKYLDSLPKGQYMDAELVKSYLYQILQGILFCHSRR--VLHRDLKPQNLLIDNKGVIKLADFGLARAFGIPVRV 157 (285)
T ss_pred CC-CCHHHHHhcCCCCCcCCHHHHHHHHHHHHHHHHHHHhCC--eeecCCCHHHEEEcCCCcEEECcccceeecCCCccc
Confidence 96 58988886432 56899999999999999999999998 999999999999999999999999998755433222
Q ss_pred ccCCCCCCcccCcccccCC-CCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccc-------------------
Q 003963 663 TKTGKGTPQWMAPEVLRNE-PSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMN------------------- 722 (783)
Q Consensus 663 ~~~~~Gt~~Y~aPE~~~~~-~~s~~sDIwSLG~il~elltG~~Pf~~~~~~~~~~~i~~~~------------------- 722 (783)
.....+++.|+|||++.+. .++.++|||||||++|+|++|++||...........+....
T Consensus 158 ~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (285)
T cd07861 158 YTHEVVTLWYRAPEVLLGSPRYSTPVDIWSIGTIFAEMATKKPLFHGDSEIDQLFRIFRILGTPTEDVWPGVTSLPDYKN 237 (285)
T ss_pred ccCCcccccccChHHhcCCCCcCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhcchhhHHHHh
Confidence 2344678899999988764 46889999999999999999999998665433222110000
Q ss_pred --------ccccCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHh
Q 003963 723 --------QRLEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYF 768 (783)
Q Consensus 723 --------~~~~~~~~~s~~l~~LI~~cL~~dP~~RPsa~ell~~L~~L~~~~f 768 (783)
........+++++.+||.+||..||.+|||+.++ +.|+||
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~~l------l~~~~~ 285 (285)
T cd07861 238 TFPKWKKGSLRSAVKNLDEDGLDLLEKMLIYDPAKRISAKKA------LNHPYF 285 (285)
T ss_pred hccccCcchhHHhcCCCCHHHHHHHHHHhcCChhhCCCHHHH------hcCCCC
Confidence 0011123578999999999999999999999999 556665
No 174
>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti
Probab=100.00 E-value=1.1e-37 Score=332.15 Aligned_cols=258 Identities=30% Similarity=0.479 Sum_probs=219.5
Q ss_pred ccceeEeeeeccCCcEEEEEEEEeC-CceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEeceeecCCceEEEE
Q 003963 504 WEDLTIGEQIGQGSCGTVYHAVWYG-SQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIVT 582 (783)
Q Consensus 504 ~~~y~i~~~LG~G~fG~Vy~a~~~~-~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lV~ 582 (783)
.++|++.+.||.|+||.||++.+.. +..||+|++... .......+.+|+.+++.++||||+++++++..+...|+||
T Consensus 4 ~~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 81 (280)
T cd06611 4 NDIWEIIGELGDGAFGKVYKAQHKETGLFAAAKIIQIE--SEEELEDFMVEIDILSECKHPNIVGLYEAYFYENKLWILI 81 (280)
T ss_pred hhHHHHHHHhcCCCCceEEEEEEcCCCcEEEEEEEeeC--CHHHHHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEe
Confidence 4679999999999999999999754 577999998644 3344567889999999999999999999999999999999
Q ss_pred EecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCccccccccc
Q 003963 583 EFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETYLT 662 (783)
Q Consensus 583 E~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~~~ 662 (783)
||+++++|.+++......+++..++.++.|++.||.|||+.+ |+|+||||+||+++.++.++|+|||++.........
T Consensus 82 e~~~~~~L~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~--i~h~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~ 159 (280)
T cd06611 82 EFCDGGALDSIMLELERGLTEPQIRYVCRQMLEALNFLHSHK--VIHRDLKAGNILLTLDGDVKLADFGVSAKNKSTLQK 159 (280)
T ss_pred eccCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC--cccCCCChhhEEECCCCCEEEccCccchhhcccccc
Confidence 999999999999876667999999999999999999999998 999999999999999999999999998765443333
Q ss_pred ccCCCCCCcccCccccc-----CCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccc-ccccCCCCCCHHHH
Q 003963 663 TKTGKGTPQWMAPEVLR-----NEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMN-QRLEIPKDVDPRWA 736 (783)
Q Consensus 663 ~~~~~Gt~~Y~aPE~~~-----~~~~s~~sDIwSLG~il~elltG~~Pf~~~~~~~~~~~i~~~~-~~~~~~~~~s~~l~ 736 (783)
.....+++.|++||.+. +..++.++|||||||++|+|++|++||...+.......+.... .....+..++.++.
T Consensus 160 ~~~~~~~~~y~~PE~~~~~~~~~~~~~~~sDi~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (280)
T cd06611 160 RDTFIGTPYWMAPEVVACETFKDNPYDYKADIWSLGITLIELAQMEPPHHELNPMRVLLKILKSEPPTLDQPSKWSSSFN 239 (280)
T ss_pred cceeecchhhcCHHHHhhcccCCCCCCccccHHHHHHHHHHHHhCCCCcccCCHHHHHHHHhcCCCCCcCCcccCCHHHH
Confidence 34456899999999975 3446789999999999999999999998887666554443221 12344567889999
Q ss_pred HHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhcC
Q 003963 737 AIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQAS 771 (783)
Q Consensus 737 ~LI~~cL~~dP~~RPsa~ell~~L~~L~~~~f~~~ 771 (783)
+||.+||..+|.+||++.++ ++|+||...
T Consensus 240 ~li~~~l~~~p~~Rps~~~i------l~~~~~~~~ 268 (280)
T cd06611 240 DFLKSCLVKDPDDRPTAAEL------LKHPFVSDQ 268 (280)
T ss_pred HHHHHHhccChhhCcCHHHH------hcChhhccc
Confidence 99999999999999999999 678998765
No 175
>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]
Probab=100.00 E-value=6.9e-39 Score=320.39 Aligned_cols=260 Identities=24% Similarity=0.402 Sum_probs=221.4
Q ss_pred cccceeEeeeeccCCcEEEEEEEEe-CCceEEEEEEecccC------CHHHHHHHHHHHHHHHhC-CCCceeeEeceeec
Q 003963 503 LWEDLTIGEQIGQGSCGTVYHAVWY-GSQDVAVKVFSRQEY------SDEVIHSFRQEVSLMKRL-RHPNVLLFMGAVTS 574 (783)
Q Consensus 503 ~~~~y~i~~~LG~G~fG~Vy~a~~~-~~~~vAiK~i~~~~~------~~~~~~~~~~Ei~il~~l-~HpnIv~l~~~~~~ 574 (783)
.+..|.-.+.||.|..++|.++.++ +++++|+|++..... ..+..+.-.+|+.||+++ .||+|+++.++|+.
T Consensus 15 fy~~y~pkeilgrgvss~vrRci~k~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~l~D~yes 94 (411)
T KOG0599|consen 15 FYAKYEPKEILGRGVSSVVRRCIHKETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIIDLQDVYES 94 (411)
T ss_pred HHhhcChHHHhcccchhhhhhhhhcccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEEeeeeccC
Confidence 3567888899999999999998765 457899999854321 234556677899999998 59999999999999
Q ss_pred CCceEEEEEecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCc
Q 003963 575 PQRLCIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSR 654 (783)
Q Consensus 575 ~~~~~lV~E~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~ 654 (783)
+..+++|+|.|+.|.|+++|.. ...++++....|++|+++|+.|||..+ ||||||||+|||++++.++||+|||+++
T Consensus 95 ~sF~FlVFdl~prGELFDyLts-~VtlSEK~tR~iMrqlfegVeylHa~~--IVHRDLKpENILlddn~~i~isDFGFa~ 171 (411)
T KOG0599|consen 95 DAFVFLVFDLMPRGELFDYLTS-KVTLSEKETRRIMRQLFEGVEYLHARN--IVHRDLKPENILLDDNMNIKISDFGFAC 171 (411)
T ss_pred cchhhhhhhhcccchHHHHhhh-heeecHHHHHHHHHHHHHHHHHHHHhh--hhhcccChhheeeccccceEEeccceee
Confidence 9999999999999999999976 456999999999999999999999998 9999999999999999999999999998
Q ss_pred ccccccccccCCCCCCcccCcccccC------CCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccccccc--
Q 003963 655 LKHETYLTTKTGKGTPQWMAPEVLRN------EPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLE-- 726 (783)
Q Consensus 655 ~~~~~~~~~~~~~Gt~~Y~aPE~~~~------~~~s~~sDIwSLG~il~elltG~~Pf~~~~~~~~~~~i~~~~~~~~-- 726 (783)
...... .....||||.|+|||.+.. ..|+..+|+|++|++||-|+.|.+||......-.+..+...+..+.
T Consensus 172 ~l~~Ge-kLrelCGTPgYLAPEtikC~m~e~~pGYs~EVD~Wa~GVImyTLLaGcpPFwHRkQmlMLR~ImeGkyqF~sp 250 (411)
T KOG0599|consen 172 QLEPGE-KLRELCGTPGYLAPETIKCSMYENHPGYSKEVDEWACGVIMYTLLAGCPPFWHRKQMLMLRMIMEGKYQFRSP 250 (411)
T ss_pred ccCCch-hHHHhcCCCcccChhheeeecccCCCCccchhhHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHhcccccCCc
Confidence 776543 3446799999999999853 3467789999999999999999999988777777777755444333
Q ss_pred CCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhcCc
Q 003963 727 IPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQASR 772 (783)
Q Consensus 727 ~~~~~s~~l~~LI~~cL~~dP~~RPsa~ell~~L~~L~~~~f~~~~ 772 (783)
-+.+++...++||.+||+.||.+|.|+.++ |.|+||+.+.
T Consensus 251 eWadis~~~KdLIsrlLqVdp~~Ritake~------LaHpff~q~~ 290 (411)
T KOG0599|consen 251 EWADISATVKDLISRLLQVDPTKRITAKEA------LAHPFFIQIA 290 (411)
T ss_pred chhhccccHHHHHHHHHeeCchhcccHHHH------hcChHHHHHH
Confidence 335678889999999999999999999999 7899995543
No 176
>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=3.5e-37 Score=332.72 Aligned_cols=264 Identities=29% Similarity=0.579 Sum_probs=221.3
Q ss_pred cccccccceeEeeeeccCCcEEEEEEEEeC--------CceEEEEEEecccCCHHHHHHHHHHHHHHHhC-CCCceeeEe
Q 003963 499 DYEILWEDLTIGEQIGQGSCGTVYHAVWYG--------SQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRL-RHPNVLLFM 569 (783)
Q Consensus 499 ~~e~~~~~y~i~~~LG~G~fG~Vy~a~~~~--------~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l-~HpnIv~l~ 569 (783)
.+++...+|.+.+.||+|+||.||++.+.. ...||+|++.... .......+.+|+.+++.+ +||||++++
T Consensus 9 ~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~-~~~~~~~~~~E~~~l~~l~~h~~i~~~~ 87 (304)
T cd05101 9 RWEFSRDKLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDA-TEKDLSDLVSEMEMMKMIGKHKNIINLL 87 (304)
T ss_pred cccccHHHeeecceeeccCCceEEEEEEeccCCCCCCcceeEEeeeccccc-chHHHHHHHHHHHHHHhhccCCCchhee
Confidence 356677899999999999999999997531 2358999886543 334456788999999999 799999999
Q ss_pred ceeecCCceEEEEEecCCCCHHHHHhhcC---------------CcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCC
Q 003963 570 GAVTSPQRLCIVTEFLPRGSLFRLLQRNT---------------TKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKS 634 (783)
Q Consensus 570 ~~~~~~~~~~lV~E~~~ggsL~~~L~~~~---------------~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp 634 (783)
+++......+++|||+++++|.+++.... ..+++..++.++.||+.||.|||+++ |+||||||
T Consensus 88 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~g--ivH~dlkp 165 (304)
T cd05101 88 GACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLASQK--CIHRDLAA 165 (304)
T ss_pred EEEecCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHHHCC--eeeccccc
Confidence 99999999999999999999999997532 24678889999999999999999998 99999999
Q ss_pred CCEEEcCCCcEEEEecCCCcccccccc--cccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCCh
Q 003963 635 SNLLVDKHWTVKVGDFGLSRLKHETYL--TTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELAT-EKIPWDNLNS 711 (783)
Q Consensus 635 ~NILl~~~~~vkL~DFGla~~~~~~~~--~~~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~ellt-G~~Pf~~~~~ 711 (783)
+|||++.++.+||+|||+++....... ......+++.|+|||++.+..++.++|||||||++|+|++ |..||...+.
T Consensus 166 ~Nili~~~~~~kl~D~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~ 245 (304)
T cd05101 166 RNVLVTENNVMKIADFGLARDVNNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPV 245 (304)
T ss_pred ceEEEcCCCcEEECCCccceecccccccccccCCCCCceeeCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCH
Confidence 999999999999999999876543221 1223345678999999999889999999999999999998 8999988877
Q ss_pred HHHHHHhhcccccccCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHH
Q 003963 712 MQVIGAVGFMNQRLEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQ 766 (783)
Q Consensus 712 ~~~~~~i~~~~~~~~~~~~~s~~l~~LI~~cL~~dP~~RPsa~ell~~L~~L~~~ 766 (783)
.+....+. .......+..++..+.+||.+||..+|.+||++.++++.|+++...
T Consensus 246 ~~~~~~~~-~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~e~l~~l~~~~~~ 299 (304)
T cd05101 246 EELFKLLK-EGHRMDKPANCTNELYMMMRDCWHAIPSHRPTFKQLVEDLDRILTL 299 (304)
T ss_pred HHHHHHHH-cCCcCCCCCCCCHHHHHHHHHHcccChhhCCCHHHHHHHHHHHHHh
Confidence 77665553 2234455677899999999999999999999999999999887653
No 177
>PHA03207 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=2.4e-37 Score=346.78 Aligned_cols=254 Identities=22% Similarity=0.342 Sum_probs=205.1
Q ss_pred cccceeEeeeeccCCcEEEEEEEEeC---CceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEeceeecCCceE
Q 003963 503 LWEDLTIGEQIGQGSCGTVYHAVWYG---SQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLC 579 (783)
Q Consensus 503 ~~~~y~i~~~LG~G~fG~Vy~a~~~~---~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~ 579 (783)
...+|+++++||+|+||.||++...+ ...|++|.+.... .+.+|+.+|+.++|||||++++++.....+|
T Consensus 90 ~~~~y~i~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~~-------~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~ 162 (392)
T PHA03207 90 VRMQYNILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGGK-------TPGREIDILKTISHRAIINLIHAYRWKSTVC 162 (392)
T ss_pred ccCceEEEEeecCCCCeEEEEEEEcCCccceeEEEEeccccc-------cHHHHHHHHHhcCCCCccceeeeEeeCCEEE
Confidence 45689999999999999999997643 3569999876432 3457999999999999999999999999999
Q ss_pred EEEEecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCcccccc
Q 003963 580 IVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHET 659 (783)
Q Consensus 580 lV~E~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~~~ 659 (783)
++||++. ++|.+++.. ...+++..++.++.||+.||.|||+++ ||||||||+||||+.++.++|+|||++......
T Consensus 163 lv~e~~~-~~l~~~l~~-~~~l~~~~~~~i~~ql~~aL~~LH~~g--ivHrDlkp~Nill~~~~~~~l~DfG~a~~~~~~ 238 (392)
T PHA03207 163 MVMPKYK-CDLFTYVDR-SGPLPLEQAITIQRRLLEALAYLHGRG--IIHRDVKTENIFLDEPENAVLGDFGAACKLDAH 238 (392)
T ss_pred EEehhcC-CCHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCC--ccccCCCHHHEEEcCCCCEEEccCccccccCcc
Confidence 9999995 689998854 456899999999999999999999998 999999999999999999999999998755433
Q ss_pred cc--cccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChH---HHHHHhhc-c------------
Q 003963 660 YL--TTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSM---QVIGAVGF-M------------ 721 (783)
Q Consensus 660 ~~--~~~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~elltG~~Pf~~~~~~---~~~~~i~~-~------------ 721 (783)
.. ......||+.|+|||++.+..++.++|||||||+||+|++|..||...... ..+..+.. .
T Consensus 239 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~ 318 (392)
T PHA03207 239 PDTPQCYGWSGTLETNSPELLALDPYCAKTDIWSAGLVLFEMSVKNVTLFGKQVKSSSSQLRSIIRCMQVHPLEFPQNGS 318 (392)
T ss_pred cccccccccccccCccCHhHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCCCCcHHHHHHHHHHhccCccccCCccc
Confidence 21 223457899999999999999999999999999999999999999654321 11111100 0
Q ss_pred ----------c----ccccCC-----CCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhcCcC
Q 003963 722 ----------N----QRLEIP-----KDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQASRS 773 (783)
Q Consensus 722 ----------~----~~~~~~-----~~~s~~l~~LI~~cL~~dP~~RPsa~ell~~L~~L~~~~f~~~~~ 773 (783)
. ....++ ..++.++.+||.+||..||.+||++.++ |.|+||+....
T Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~Rpsa~e~------l~~p~f~~~~~ 383 (392)
T PHA03207 319 TNLCKHFKQYAIVLRPPYTIPPVIRKYGMHMDVEYLIAKMLTFDQEFRPSAQDI------LSLPLFTKEPI 383 (392)
T ss_pred hhHHHHHHhhcccccCCccccchhhccCcchhHHHHHHHHhccChhhCCCHHHH------hhCchhhccch
Confidence 0 001111 1346788999999999999999999999 78899976443
No 178
>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3. Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r
Probab=100.00 E-value=4.5e-37 Score=327.91 Aligned_cols=257 Identities=26% Similarity=0.475 Sum_probs=212.8
Q ss_pred ccceeEeeeeccCCcEEEEEEEEeCC-c----eEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEeceeecCCce
Q 003963 504 WEDLTIGEQIGQGSCGTVYHAVWYGS-Q----DVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRL 578 (783)
Q Consensus 504 ~~~y~i~~~LG~G~fG~Vy~a~~~~~-~----~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~ 578 (783)
.++|++.+.||+|+||.||+|.+... + .+++|.+.... .......+..|+.+++.+.||||+++++++.. ...
T Consensus 6 ~~~~~~~~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~~-~~~~~~~~~~~~~~l~~l~h~~iv~~~~~~~~-~~~ 83 (279)
T cd05111 6 ETELRKLKLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDRS-GRQTFQEITDHMLAMGSLDHAYIVRLLGICPG-ASL 83 (279)
T ss_pred HhhceeccccCccCCcceEEEEEcCCCCceeeEEEEeeccccc-chHHHHHHHHHHHHHhcCCCCCcceEEEEECC-Ccc
Confidence 36789999999999999999987543 2 37777764322 23445677888889999999999999998754 557
Q ss_pred EEEEEecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCccccc
Q 003963 579 CIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHE 658 (783)
Q Consensus 579 ~lV~E~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~~ 658 (783)
++++||+++|+|.+++......+++..++.++.||+.||.|||+.+ ++|+||||+|||++.++.+||+|||+++....
T Consensus 84 ~~i~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~--iiH~dlkp~nili~~~~~~kl~Dfg~~~~~~~ 161 (279)
T cd05111 84 QLVTQLSPLGSLLDHVRQHRDSLDPQRLLNWCVQIAKGMYYLEEHR--MVHRNLAARNILLKSDSIVQIADFGVADLLYP 161 (279)
T ss_pred EEEEEeCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCC--EeccccCcceEEEcCCCcEEEcCCccceeccC
Confidence 8899999999999999876667899999999999999999999988 99999999999999999999999999976533
Q ss_pred ccc--cccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCChHHHHHHhhcccccccCCCCCCHHH
Q 003963 659 TYL--TTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELAT-EKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRW 735 (783)
Q Consensus 659 ~~~--~~~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~l 735 (783)
... ......++..|++||.+.+..++.++|||||||++|||++ |..||...........+. .......+..++..+
T Consensus 162 ~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 240 (279)
T cd05111 162 DDKKYFYSEHKTPIKWMALESILFGRYTHQSDVWSYGVTVWEMMSYGAEPYAGMRPHEVPDLLE-KGERLAQPQICTIDV 240 (279)
T ss_pred CCcccccCCCCCcccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHH-CCCcCCCCCCCCHHH
Confidence 211 1223346778999999998889999999999999999998 999998877665444442 233445566678899
Q ss_pred HHHHHHhhhhCCCCCCCHHHHHHHHHHHHH
Q 003963 736 AAIVESCWHSDPQCRPSFQELVDKLRDLQR 765 (783)
Q Consensus 736 ~~LI~~cL~~dP~~RPsa~ell~~L~~L~~ 765 (783)
..++.+||..+|.+||++.++++.|..+..
T Consensus 241 ~~li~~c~~~~p~~Rps~~el~~~l~~~~~ 270 (279)
T cd05111 241 YMVMVKCWMIDENVRPTFKELANEFTRMAR 270 (279)
T ss_pred HHHHHHHcCCCcccCcCHHHHHHHHHHHHh
Confidence 999999999999999999999998887654
No 179
>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase. Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.
Probab=100.00 E-value=2.1e-37 Score=330.50 Aligned_cols=257 Identities=28% Similarity=0.442 Sum_probs=215.8
Q ss_pred ceeEeeeeccCCcEEEEEEEEeC-CceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEeceeecCCceEEEEEe
Q 003963 506 DLTIGEQIGQGSCGTVYHAVWYG-SQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIVTEF 584 (783)
Q Consensus 506 ~y~i~~~LG~G~fG~Vy~a~~~~-~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lV~E~ 584 (783)
-|++.++||.|+||.||++.+.. +..+++|.+.... ......+.+|+.+++.++||||+++++++......++||||
T Consensus 6 ~~~i~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~--~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~~v~e~ 83 (282)
T cd06643 6 FWEIIGELGDGAFGKVYKAQNKETGVLAAAKVIDTKS--EEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEF 83 (282)
T ss_pred HHHHHhhcccCCCeEEEEEEECCCCeEEEEEEeCCCC--HHHHHHHHHHHHHHHHCCCCCeeeEEEEEeeCCEEEEEEEe
Confidence 36888999999999999999865 4568888875432 34456788899999999999999999999999999999999
Q ss_pred cCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCccccccccccc
Q 003963 585 LPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETYLTTK 664 (783)
Q Consensus 585 ~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~~~~~ 664 (783)
+++++|..++.+...++++..+..++.|++.||.|||+.+ |+|+||||+|||++.++.++|+|||++...........
T Consensus 84 ~~~~~l~~~~~~~~~~l~~~~~~~~~~qi~~~L~~LH~~~--i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~~~~~~ 161 (282)
T cd06643 84 CAGGAVDAVMLELERPLTEPQIRVVCKQTLEALNYLHENK--IIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQRRD 161 (282)
T ss_pred cCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC--eeecCCCcccEEEccCCCEEEccccccccccccccccc
Confidence 9999999988765567899999999999999999999998 99999999999999999999999999876544333334
Q ss_pred CCCCCCcccCccccc-----CCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhcc-cccccCCCCCCHHHHHH
Q 003963 665 TGKGTPQWMAPEVLR-----NEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFM-NQRLEIPKDVDPRWAAI 738 (783)
Q Consensus 665 ~~~Gt~~Y~aPE~~~-----~~~~s~~sDIwSLG~il~elltG~~Pf~~~~~~~~~~~i~~~-~~~~~~~~~~s~~l~~L 738 (783)
...+++.|+|||++. +..++.++|||||||++|+|++|.+||...+.......+... ......+..++.++.+|
T Consensus 162 ~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 241 (282)
T cd06643 162 SFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSEPPTLAQPSRWSSEFKDF 241 (282)
T ss_pred cccccccccCHhhccccCCCCCCCCccchhhhHHHHHHHHccCCCCccccCHHHHHHHHhhcCCCCCCCccccCHHHHHH
Confidence 456899999999974 445678999999999999999999999887766554444222 22334556788999999
Q ss_pred HHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhcCc
Q 003963 739 VESCWHSDPQCRPSFQELVDKLRDLQRQYFQASR 772 (783)
Q Consensus 739 I~~cL~~dP~~RPsa~ell~~L~~L~~~~f~~~~ 772 (783)
|.+||..+|.+||++.++ ++|+||+...
T Consensus 242 i~~~l~~~p~~Rp~~~~i------l~~~~~~~~~ 269 (282)
T cd06643 242 LKKCLEKNVDARWTTTQL------LQHPFVTVNS 269 (282)
T ss_pred HHHHccCChhhCcCHHHH------hcCCCEeccC
Confidence 999999999999999999 7889987543
No 180
>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=5.2e-37 Score=333.20 Aligned_cols=263 Identities=30% Similarity=0.601 Sum_probs=220.0
Q ss_pred ccccccceeEeeeeccCCcEEEEEEEEeC--------CceEEEEEEecccCCHHHHHHHHHHHHHHHhC-CCCceeeEec
Q 003963 500 YEILWEDLTIGEQIGQGSCGTVYHAVWYG--------SQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRL-RHPNVLLFMG 570 (783)
Q Consensus 500 ~e~~~~~y~i~~~LG~G~fG~Vy~a~~~~--------~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l-~HpnIv~l~~ 570 (783)
+.+..++|.+.++||+|+||.||++.+.+ ...||+|++.... .......+..|+.+++.+ +||||+++++
T Consensus 7 ~~~~~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~-~~~~~~~~~~E~~~l~~l~~h~~iv~~~~ 85 (314)
T cd05099 7 WEFPRDRLVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNA-TDKDLADLISEMELMKLIGKHKNIINLLG 85 (314)
T ss_pred ccccHHHeeeeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCC-ChHHHHHHHHHHHHHHhccCCCCeeeEEE
Confidence 45666899999999999999999997532 2358999887543 334456788999999999 5999999999
Q ss_pred eeecCCceEEEEEecCCCCHHHHHhhcC---------------CcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCC
Q 003963 571 AVTSPQRLCIVTEFLPRGSLFRLLQRNT---------------TKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSS 635 (783)
Q Consensus 571 ~~~~~~~~~lV~E~~~ggsL~~~L~~~~---------------~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~ 635 (783)
++...+.++++|||+++++|.+++.... ..+++..+..++.||+.||.|||+++ |+|+||||+
T Consensus 86 ~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~g--i~H~dlkp~ 163 (314)
T cd05099 86 VCTQEGPLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLESRR--CIHRDLAAR 163 (314)
T ss_pred EEccCCceEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHHHCC--eeeccccce
Confidence 9999999999999999999999996532 34788899999999999999999998 999999999
Q ss_pred CEEEcCCCcEEEEecCCCcccccccc--cccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCChH
Q 003963 636 NLLVDKHWTVKVGDFGLSRLKHETYL--TTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELAT-EKIPWDNLNSM 712 (783)
Q Consensus 636 NILl~~~~~vkL~DFGla~~~~~~~~--~~~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~ellt-G~~Pf~~~~~~ 712 (783)
|||++.++.+||+|||+++....... ......++..|+|||++.+..++.++|||||||++|+|++ |..||...+..
T Consensus 164 Nill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~ 243 (314)
T cd05099 164 NVLVTEDNVMKIADFGLARGVHDIDYYKKTSNGRLPVKWMAPEALFDRVYTHQSDVWSFGILMWEIFTLGGSPYPGIPVE 243 (314)
T ss_pred eEEEcCCCcEEEccccccccccccccccccccCCCCccccCHHHHccCCcCccchhhHHHHHHHHHHhCCCCCCCCCCHH
Confidence 99999999999999999976543211 1122234568999999999889999999999999999999 89999888776
Q ss_pred HHHHHhhcccccccCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHH
Q 003963 713 QVIGAVGFMNQRLEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQ 766 (783)
Q Consensus 713 ~~~~~i~~~~~~~~~~~~~s~~l~~LI~~cL~~dP~~RPsa~ell~~L~~L~~~ 766 (783)
+....+.. ......+..++.++.+||.+||..+|.+||++.++++.|.++...
T Consensus 244 ~~~~~~~~-~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~l~~~~~~ 296 (314)
T cd05099 244 ELFKLLRE-GHRMDKPSNCTHELYMLMRECWHAVPTQRPTFKQLVEALDKVLAA 296 (314)
T ss_pred HHHHHHHc-CCCCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHHH
Confidence 66655532 233456677899999999999999999999999999999988654
No 181
>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti
Probab=100.00 E-value=3e-37 Score=323.77 Aligned_cols=254 Identities=23% Similarity=0.430 Sum_probs=218.5
Q ss_pred ceeEeeeeccCCcEEEEEEEEeC-CceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEeceeecCCceEEEEEe
Q 003963 506 DLTIGEQIGQGSCGTVYHAVWYG-SQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIVTEF 584 (783)
Q Consensus 506 ~y~i~~~LG~G~fG~Vy~a~~~~-~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lV~E~ 584 (783)
+|++.+.||+|+||.||++.... ++.|++|.+............+.+|+.+++.++||||+++++++...+..++||||
T Consensus 1 ~y~~~~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~ 80 (256)
T cd08218 1 KYVKVKKIGEGSFGKAILVKSKEDGKQYVIKEINISKMSPKEREESRKEVAVLSNMKHPNIVQYQESFEENGNLYIVMDY 80 (256)
T ss_pred CceEEEEeccCCceEEEEEEEcCCCCEEEEEEEEhHhCChHHHHHHHHHHHHHHhCCCCCeeeeEeeecCCCeEEEEEec
Confidence 58999999999999999998754 57899999876655555566889999999999999999999999999999999999
Q ss_pred cCCCCHHHHHhhc-CCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCcccccccccc
Q 003963 585 LPRGSLFRLLQRN-TTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETYLTT 663 (783)
Q Consensus 585 ~~ggsL~~~L~~~-~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~~~~ 663 (783)
+.+++|.+++... ...+++..++.++.|++.||.|||+++ ++|+||+|+|||++.++.++|+|||++..........
T Consensus 81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~--i~h~~l~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~ 158 (256)
T cd08218 81 CEGGDLYKKINAQRGVLFPEDQILDWFVQICLALKHVHDRK--ILHRDIKSQNIFLTKDGTIKLGDFGIARVLNSTVELA 158 (256)
T ss_pred CCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCC--EecCCCCHHHEEEcCCCCEEEeeccceeecCcchhhh
Confidence 9999999998753 345789999999999999999999998 9999999999999999999999999987655433333
Q ss_pred cCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhcccccccCCCCCCHHHHHHHHHhh
Q 003963 664 KTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAAIVESCW 743 (783)
Q Consensus 664 ~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~l~~LI~~cL 743 (783)
....|++.|+|||++.+...+.++|+|||||++|+|++|..||...+.......+. .......+..++.++.++|.+||
T Consensus 159 ~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~li~~~l 237 (256)
T cd08218 159 RTCIGTPYYLSPEICENRPYNNKSDIWALGCVLYEMCTLKHAFEAGNMKNLVLKII-RGSYPPVSSHYSYDLRNLVSQLF 237 (256)
T ss_pred hhccCCccccCHHHhCCCCCCCccchhHHHHHHHHHHcCCCCccCCCHHHHHHHHh-cCCCCCCcccCCHHHHHHHHHHh
Confidence 34467889999999999889999999999999999999999998777666554442 23344567788999999999999
Q ss_pred hhCCCCCCCHHHHHHHHHHHHHHHh
Q 003963 744 HSDPQCRPSFQELVDKLRDLQRQYF 768 (783)
Q Consensus 744 ~~dP~~RPsa~ell~~L~~L~~~~f 768 (783)
+.+|.+||++.++ ++|+||
T Consensus 238 ~~~p~~Rp~~~~v------l~~~~~ 256 (256)
T cd08218 238 KRNPRDRPSVNSI------LEKNFI 256 (256)
T ss_pred hCChhhCcCHHHH------hhCcCC
Confidence 9999999999999 556665
No 182
>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr
Probab=100.00 E-value=4.9e-37 Score=325.12 Aligned_cols=256 Identities=31% Similarity=0.539 Sum_probs=216.7
Q ss_pred ccceeEeeeeccCCcEEEEEEEEeCC----ceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEeceeecCCceE
Q 003963 504 WEDLTIGEQIGQGSCGTVYHAVWYGS----QDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLC 579 (783)
Q Consensus 504 ~~~y~i~~~LG~G~fG~Vy~a~~~~~----~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~ 579 (783)
..+|++.+.||+|+||.||+|.+... ..|+||++.... .......+..|+.+++.++||||+++++++.....++
T Consensus 3 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~ 81 (269)
T cd05065 3 VSCVKIEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGY-TEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSRPVM 81 (269)
T ss_pred hHHeEEEeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCC-CHHHHHHHHHHHHHHHhCCCcCcceEEEEECCCCceE
Confidence 35789999999999999999997643 259999986543 4555678999999999999999999999999999999
Q ss_pred EEEEecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCcccccc
Q 003963 580 IVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHET 659 (783)
Q Consensus 580 lV~E~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~~~ 659 (783)
+||||+++++|.+++......+++..++.++.|++.||.|||+++ ++|+||||+||+++.++.++|+|||++......
T Consensus 82 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~l~~al~~lH~~g--~~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~ 159 (269)
T cd05065 82 IITEFMENGALDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLSEMN--YVHRDLAARNILVNSNLVCKVSDFGLSRFLEDD 159 (269)
T ss_pred EEEecCCCCcHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHHCC--EeecccChheEEEcCCCcEEECCCccccccccC
Confidence 999999999999999876667899999999999999999999998 999999999999999999999999998755432
Q ss_pred cccc-----cCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCChHHHHHHhhcccccccCCCCCCH
Q 003963 660 YLTT-----KTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELAT-EKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDP 733 (783)
Q Consensus 660 ~~~~-----~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~ 733 (783)
.... .....+..|+|||.+.+..++.++|||||||++|||++ |..||...+.......+. .....+.+..++.
T Consensus 160 ~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~e~l~~g~~p~~~~~~~~~~~~i~-~~~~~~~~~~~~~ 238 (269)
T cd05065 160 TSDPTYTSSLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVINAIE-QDYRLPPPMDCPT 238 (269)
T ss_pred ccccccccccCCCcceeecCHhHhccCcccchhhhhhhHHHHHHHhcCCCCCCCCCCHHHHHHHHH-cCCcCCCcccCCH
Confidence 2110 11112457999999999999999999999999999986 999998887776665553 2234455667899
Q ss_pred HHHHHHHHhhhhCCCCCCCHHHHHHHHHHH
Q 003963 734 RWAAIVESCWHSDPQCRPSFQELVDKLRDL 763 (783)
Q Consensus 734 ~l~~LI~~cL~~dP~~RPsa~ell~~L~~L 763 (783)
.+.+++.+||..+|.+||++.+++..|+++
T Consensus 239 ~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~ 268 (269)
T cd05065 239 ALHQLMLDCWQKDRNARPKFGQIVSTLDKM 268 (269)
T ss_pred HHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 999999999999999999999999988764
No 183
>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp
Probab=100.00 E-value=2.6e-37 Score=340.20 Aligned_cols=263 Identities=29% Similarity=0.518 Sum_probs=212.8
Q ss_pred ccccccceeEeeeeccCCcEEEEEEEEe------CCceEEEEEEecccCCHHHHHHHHHHHHHHHhC-CCCceeeEecee
Q 003963 500 YEILWEDLTIGEQIGQGSCGTVYHAVWY------GSQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRL-RHPNVLLFMGAV 572 (783)
Q Consensus 500 ~e~~~~~y~i~~~LG~G~fG~Vy~a~~~------~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l-~HpnIv~l~~~~ 572 (783)
|+...++|++.+.||+|+||.||+|.+. .++.||||++..... ......+.+|+.++..+ +||||+++++++
T Consensus 2 ~~~~~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~~h~niv~~~~~~ 80 (343)
T cd05103 2 WEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGAT-HSEHRALMSELKILIHIGHHLNVVNLLGAC 80 (343)
T ss_pred cccchhHhcccccccCCccceEEEEeeccCCccccceeEEEEEeccCCC-hHHHHHHHHHHHHHHhccCCccHhhhccee
Confidence 4556679999999999999999999853 245799999875443 33456788899999999 689999999987
Q ss_pred ecC-CceEEEEEecCCCCHHHHHhhcC-----------------------------------------------------
Q 003963 573 TSP-QRLCIVTEFLPRGSLFRLLQRNT----------------------------------------------------- 598 (783)
Q Consensus 573 ~~~-~~~~lV~E~~~ggsL~~~L~~~~----------------------------------------------------- 598 (783)
... ..++++||||++|+|.+++....
T Consensus 81 ~~~~~~~~lv~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (343)
T cd05103 81 TKPGGPLMVIVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLKRRLDSITSSQSSASSGFVEEKSLSD 160 (343)
T ss_pred ecCCCceEEEEeccCCCcHHHHHHhcCCccccccccccccccccccccchhhhhhhhccccccccccccccccCCCcccc
Confidence 654 46899999999999999986421
Q ss_pred -------------CcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCccccccc--ccc
Q 003963 599 -------------TKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETY--LTT 663 (783)
Q Consensus 599 -------------~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~--~~~ 663 (783)
..+++..+..++.||+.||+|||+++ |+||||||+|||++.++.+||+|||++....... ...
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~--i~H~dikp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~ 238 (343)
T cd05103 161 VEEEEAEQEDLYKKVLTLEDLICYSFQVAKGMEFLASRK--CIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRK 238 (343)
T ss_pred chhhhhhhhhhhhccCCHHHHHHHHHHHHHHHHHHHhCC--eecCCCccCeEEEcCCCcEEEEecccccccccCcchhhc
Confidence 23577788899999999999999998 9999999999999999999999999987543221 111
Q ss_pred cCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCChHHHHHHhhcccccccCCCCCCHHHHHHHHHh
Q 003963 664 KTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELAT-EKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAAIVESC 742 (783)
Q Consensus 664 ~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~l~~LI~~c 742 (783)
....++..|+|||++.+..++.++|||||||++|+|++ |..||.....................+..+++++.+++..|
T Consensus 239 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c 318 (343)
T cd05103 239 GDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDC 318 (343)
T ss_pred CCCCCCcceECcHHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCccccHHHHHHHhccCCCCCCCCCCHHHHHHHHHH
Confidence 22345678999999999899999999999999999997 99999776543333222223334556667889999999999
Q ss_pred hhhCCCCCCCHHHHHHHHHHHHH
Q 003963 743 WHSDPQCRPSFQELVDKLRDLQR 765 (783)
Q Consensus 743 L~~dP~~RPsa~ell~~L~~L~~ 765 (783)
|+.+|.+||++.+|+++|+.+.+
T Consensus 319 l~~~p~~Rps~~eil~~l~~~~~ 341 (343)
T cd05103 319 WHGEPSQRPTFSELVEHLGNLLQ 341 (343)
T ss_pred ccCChhhCcCHHHHHHHHHHHHh
Confidence 99999999999999999887754
No 184
>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa. Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho
Probab=100.00 E-value=5.4e-37 Score=323.28 Aligned_cols=247 Identities=26% Similarity=0.526 Sum_probs=207.2
Q ss_pred eeccCCcEEEEEEEEeC---CceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEeceeecCCceEEEEEecCCC
Q 003963 512 QIGQGSCGTVYHAVWYG---SQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIVTEFLPRG 588 (783)
Q Consensus 512 ~LG~G~fG~Vy~a~~~~---~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lV~E~~~gg 588 (783)
.||+|+||.||+|.+.. +..||+|++.... .....+.+.+|+.+++.++||||+++++++. ....++||||++++
T Consensus 2 ~ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~-~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~-~~~~~lv~e~~~~~ 79 (257)
T cd05115 2 ELGSGNFGCVKKGVYKMRKKQIDVAIKVLKNEN-EKSVRDEMMREAEIMHQLDNPYIVRMIGVCE-AEALMLVMEMASGG 79 (257)
T ss_pred ccCCCCcccEEEEEEecCCCceeEEEEEccccc-ChHHHHHHHHHHHHHHhcCCCCeEEEEEEEc-CCCeEEEEEeCCCC
Confidence 48999999999998752 2358999886543 3445567899999999999999999999886 45789999999999
Q ss_pred CHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCccccccccc---ccC
Q 003963 589 SLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETYLT---TKT 665 (783)
Q Consensus 589 sL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~~~---~~~ 665 (783)
+|.+++......+++..++.++.||+.||.|||+++ ++|+||||+|||++.++.+||+|||++......... ...
T Consensus 80 ~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~--i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~ 157 (257)
T cd05115 80 PLNKFLSGKKDEITVSNVVELMHQVSMGMKYLEGKN--FVHRDLAARNVLLVNQHYAKISDFGLSKALGADDSYYKARSA 157 (257)
T ss_pred CHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhcC--eeecccchheEEEcCCCcEEeccCCccccccCCccceeccCC
Confidence 999999766667899999999999999999999998 999999999999999999999999998754332111 112
Q ss_pred CCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCChHHHHHHhhcccccccCCCCCCHHHHHHHHHhhh
Q 003963 666 GKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELAT-EKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAAIVESCWH 744 (783)
Q Consensus 666 ~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~l~~LI~~cL~ 744 (783)
..++..|+|||.+.+..++.++|||||||++|+|++ |..||...........+. .......+..+++++.++|.+||.
T Consensus 158 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~li~~c~~ 236 (257)
T cd05115 158 GKWPLKWYAPECINFRKFSSRSDVWSYGITMWEAFSYGQKPYKKMKGPEVMSFIE-QGKRLDCPAECPPEMYALMKDCWI 236 (257)
T ss_pred CCCCcccCCHHHHccCCCCchhhHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHHH-CCCCCCCCCCCCHHHHHHHHHHcC
Confidence 233578999999998889999999999999999996 999999888776665543 233456677889999999999999
Q ss_pred hCCCCCCCHHHHHHHHHHH
Q 003963 745 SDPQCRPSFQELVDKLRDL 763 (783)
Q Consensus 745 ~dP~~RPsa~ell~~L~~L 763 (783)
.+|++||++.++++.|+.+
T Consensus 237 ~~~~~Rp~~~~i~~~l~~~ 255 (257)
T cd05115 237 YKWEDRPNFAKVEERMRTY 255 (257)
T ss_pred CChhhCcCHHHHHHHHhhh
Confidence 9999999999998887643
No 185
>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase. Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down
Probab=100.00 E-value=3.8e-37 Score=333.52 Aligned_cols=256 Identities=23% Similarity=0.403 Sum_probs=211.6
Q ss_pred cceeEeeeeccCCcEEEEEEEEeC-CceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEeceeecCCceEEEEE
Q 003963 505 EDLTIGEQIGQGSCGTVYHAVWYG-SQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIVTE 583 (783)
Q Consensus 505 ~~y~i~~~LG~G~fG~Vy~a~~~~-~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lV~E 583 (783)
++|++.++||+|+||.||++.+.. +..+|+|.+... ........+.+|+++++.++||||+++++++..++.+++|||
T Consensus 1 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~-~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 79 (308)
T cd06615 1 DDFEKLGELGAGNGGVVTKVLHRPSGLIMARKLIHLE-IKPAIRNQIIRELKVLHECNSPYIVGFYGAFYSDGEISICME 79 (308)
T ss_pred CCceEEeeccCCCCeEEEEEEEcCCCeEEEEEEeccc-cCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCEEEEEee
Confidence 368999999999999999999765 456888887643 234556678899999999999999999999999999999999
Q ss_pred ecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHh-CCCCEEecCCCCCCEEEcCCCcEEEEecCCCccccccccc
Q 003963 584 FLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHH-CNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETYLT 662 (783)
Q Consensus 584 ~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~-~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~~~ 662 (783)
|+++++|.+++... ..+++..+..++.||+.||.|||+ ++ ++|+||||+|||++.++.++|+|||++.......
T Consensus 80 y~~~~~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~~--i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~-- 154 (308)
T cd06615 80 HMDGGSLDQVLKKA-GRIPENILGKISIAVLRGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSM-- 154 (308)
T ss_pred ccCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhhCC--EEECCCChHHEEEecCCcEEEccCCCcccccccc--
Confidence 99999999999764 468899999999999999999997 57 9999999999999999999999999987554332
Q ss_pred ccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhcccc-------------------
Q 003963 663 TKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQ------------------- 723 (783)
Q Consensus 663 ~~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~elltG~~Pf~~~~~~~~~~~i~~~~~------------------- 723 (783)
.....|++.|+|||++.+..++.++|||||||++|+|++|..||...+.......+.....
T Consensus 155 ~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (308)
T cd06615 155 ANSFVGTRSYMSPERLQGTHYTVQSDIWSLGLSLVEMAIGRYPIPPPDAKELEAMFGRPVSEGEAKESHRPVSGHPPDSP 234 (308)
T ss_pred cccCCCCcCccChhHhcCCCCCccchHHHHHHHHHHHHhCCCCCCCcchhhHHHhhcCccccccccCCcccccCCCCCcc
Confidence 2345789999999999888899999999999999999999999976554333222211100
Q ss_pred ----------------cccCC-CCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhcCc
Q 003963 724 ----------------RLEIP-KDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQASR 772 (783)
Q Consensus 724 ----------------~~~~~-~~~s~~l~~LI~~cL~~dP~~RPsa~ell~~L~~L~~~~f~~~~ 772 (783)
.+..| ..++.++++||.+||..+|++||++.++ ++++||+...
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~l------l~~~~~~~~~ 294 (308)
T cd06615 235 RPMAIFELLDYIVNEPPPKLPSGAFSDEFQDFVDKCLKKNPKERADLKEL------TKHPFIKRAE 294 (308)
T ss_pred chhhHHHHHHHHhcCCCccCcCcccCHHHHHHHHHHccCChhhCcCHHHH------hcChhhhhcc
Confidence 01111 1367889999999999999999999999 7889997643
No 186
>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored
Probab=100.00 E-value=6.2e-37 Score=323.88 Aligned_cols=257 Identities=30% Similarity=0.506 Sum_probs=216.9
Q ss_pred cccceeEeeeeccCCcEEEEEEEEeCC----ceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEeceeecCCce
Q 003963 503 LWEDLTIGEQIGQGSCGTVYHAVWYGS----QDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRL 578 (783)
Q Consensus 503 ~~~~y~i~~~LG~G~fG~Vy~a~~~~~----~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~ 578 (783)
...+|+..+.||+|+||.||+|.+... ..+++|++.... .......+..|+.+++.++||||+++++++...+..
T Consensus 3 ~~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~ 81 (268)
T cd05063 3 HPSHITKQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGY-TEKQRQDFLSEASIMGQFSHHNIIRLEGVVTKFKPA 81 (268)
T ss_pred ChHHceEeeEecCCCCccEEEEEEecCCCCceEEEEEeccccC-CHHHHHHHHHHHHHHhcCCCCCeeEEEEEEccCCCc
Confidence 346789999999999999999997642 258999886543 344456788999999999999999999999999999
Q ss_pred EEEEEecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCccccc
Q 003963 579 CIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHE 658 (783)
Q Consensus 579 ~lV~E~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~~ 658 (783)
++||||+++++|.+++......+++..+..++.|++.||+|||+.+ ++|+||||+||+++.++.++|+|||++.....
T Consensus 82 ~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~--i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~ 159 (268)
T cd05063 82 MIITEYMENGALDKYLRDHDGEFSSYQLVGMLRGIAAGMKYLSDMN--YVHRDLAARNILVNSNLECKVSDFGLSRVLED 159 (268)
T ss_pred EEEEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC--eeccccchhhEEEcCCCcEEECCCccceeccc
Confidence 9999999999999999876667899999999999999999999998 99999999999999999999999999875543
Q ss_pred ccccc---cCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCChHHHHHHhhcccccccCCCCCCHH
Q 003963 659 TYLTT---KTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELAT-EKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPR 734 (783)
Q Consensus 659 ~~~~~---~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~ 734 (783)
..... .....+..|+|||++.+..++.++|||||||++|+|++ |+.||...+..+....+... ...+.+..++..
T Consensus 160 ~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~il~ell~~g~~p~~~~~~~~~~~~i~~~-~~~~~~~~~~~~ 238 (268)
T cd05063 160 DPEGTYTTSGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSFGERPYWDMSNHEVMKAINDG-FRLPAPMDCPSA 238 (268)
T ss_pred ccccceeccCCCcCceecCHHHhhcCCcChHhHHHHHHHHHHHHHhCCCCCCCcCCHHHHHHHHhcC-CCCCCCCCCCHH
Confidence 22111 11223457999999998889999999999999999997 99999887776666665432 344445568899
Q ss_pred HHHHHHHhhhhCCCCCCCHHHHHHHHHHH
Q 003963 735 WAAIVESCWHSDPQCRPSFQELVDKLRDL 763 (783)
Q Consensus 735 l~~LI~~cL~~dP~~RPsa~ell~~L~~L 763 (783)
+.+++.+||+.+|.+||++.++++.|+++
T Consensus 239 ~~~li~~c~~~~p~~Rp~~~~i~~~l~~~ 267 (268)
T cd05063 239 VYQLMLQCWQQDRARRPRFVDIVNLLDKL 267 (268)
T ss_pred HHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 99999999999999999999999998875
No 187
>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk
Probab=100.00 E-value=4.8e-37 Score=322.48 Aligned_cols=251 Identities=35% Similarity=0.635 Sum_probs=216.3
Q ss_pred ccccceeEeeeeccCCcEEEEEEEEeCCceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEeceeecCCceEEE
Q 003963 502 ILWEDLTIGEQIGQGSCGTVYHAVWYGSQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIV 581 (783)
Q Consensus 502 ~~~~~y~i~~~LG~G~fG~Vy~a~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lV 581 (783)
+..++|++.+.||.|+||.||++... ++.||+|.+..... ..+.+.+|+.+++.++|+||+++++++......++|
T Consensus 3 ~~~~~~~~~~~ig~g~~g~v~~~~~~-~~~v~iK~~~~~~~---~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v 78 (256)
T cd05039 3 INSKELKLGATIGKGEFGDVMLGDYR-GQKVAVKCLKDDST---AAQAFLAEASVMTTLRHPNLVQLLGVVLQGNPLYIV 78 (256)
T ss_pred cChhhccceeeeecCCCceEEEEEec-CcEEEEEEeccchh---HHHHHHHHHHHHHhcCCcceeeeEEEEcCCCCeEEE
Confidence 34578999999999999999999876 56899999876543 456788999999999999999999999998999999
Q ss_pred EEecCCCCHHHHHhhcC-CcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCccccccc
Q 003963 582 TEFLPRGSLFRLLQRNT-TKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETY 660 (783)
Q Consensus 582 ~E~~~ggsL~~~L~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~ 660 (783)
|||+++++|.+++.... ..+++..++.++.|++.||.|||+++ |+|+||||+||+++.++.++|+|||++.......
T Consensus 79 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lh~~~--i~H~di~p~Nili~~~~~~~l~d~g~~~~~~~~~ 156 (256)
T cd05039 79 TEYMAKGSLVDYLRSRGRAVITLAQQLGFALDVCEGMEYLEEKN--FVHRDLAARNVLVSEDLVAKVSDFGLAKEASQGQ 156 (256)
T ss_pred EEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC--ccchhcccceEEEeCCCCEEEccccccccccccc
Confidence 99999999999997543 25899999999999999999999998 9999999999999999999999999987653322
Q ss_pred ccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCChHHHHHHhhcccccccCCCCCCHHHHHHH
Q 003963 661 LTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELAT-EKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAAIV 739 (783)
Q Consensus 661 ~~~~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~l~~LI 739 (783)
. ...++..|+|||.+.+..++.++|||||||++|+|++ |..||...........+.. ......+..+++.+.++|
T Consensus 157 ~---~~~~~~~~~ape~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~li 232 (256)
T cd05039 157 D---SGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPHVEK-GYRMEAPEGCPPEVYKVM 232 (256)
T ss_pred c---cCCCcccccCchhhcCCcCCcHHHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhc-CCCCCCccCCCHHHHHHH
Confidence 1 2344667999999988889999999999999999997 9999988877666555432 234456677899999999
Q ss_pred HHhhhhCCCCCCCHHHHHHHHHH
Q 003963 740 ESCWHSDPQCRPSFQELVDKLRD 762 (783)
Q Consensus 740 ~~cL~~dP~~RPsa~ell~~L~~ 762 (783)
.+||..+|.+||++.++++.|..
T Consensus 233 ~~~l~~~p~~Rp~~~~l~~~l~~ 255 (256)
T cd05039 233 KDCWELDPAKRPTFKQLREQLAL 255 (256)
T ss_pred HHHhccChhhCcCHHHHHHHHhc
Confidence 99999999999999999998864
No 188
>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept
Probab=100.00 E-value=4.9e-37 Score=331.84 Aligned_cols=262 Identities=28% Similarity=0.497 Sum_probs=217.0
Q ss_pred cccccccceeEeeeeccCCcEEEEEEEEeC------CceEEEEEEecccCCHHHHHHHHHHHHHHHhC-CCCceeeEece
Q 003963 499 DYEILWEDLTIGEQIGQGSCGTVYHAVWYG------SQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRL-RHPNVLLFMGA 571 (783)
Q Consensus 499 ~~e~~~~~y~i~~~LG~G~fG~Vy~a~~~~------~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l-~HpnIv~l~~~ 571 (783)
.++...++|.+.+.||+|+||.||++.+.. ...||+|++..... ......+.+|+.+++.+ +||||++++++
T Consensus 29 ~~~~~~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~~h~~iv~~~~~ 107 (302)
T cd05055 29 KWEFPRNNLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAH-SSEREALMSELKIMSHLGNHENIVNLLGA 107 (302)
T ss_pred cccccHHHeEEcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccCC-hHHHHHHHHHHHHHHhccCCCCcceEEEE
Confidence 345667799999999999999999998532 23689998865432 34456788999999999 79999999999
Q ss_pred eecCCceEEEEEecCCCCHHHHHhhcC-CcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEec
Q 003963 572 VTSPQRLCIVTEFLPRGSLFRLLQRNT-TKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDF 650 (783)
Q Consensus 572 ~~~~~~~~lV~E~~~ggsL~~~L~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DF 650 (783)
+...+.++++|||+++++|.+++.... ..+++..++.++.||+.||.|||+++ |+|+||||+|||++.++.++|+||
T Consensus 108 ~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~--ivH~dlkp~Nil~~~~~~~~l~df 185 (302)
T cd05055 108 CTIGGPILVITEYCCYGDLLNFLRRKRESFLTLEDLLSFSYQVAKGMAFLASKN--CIHRDLAARNVLLTHGKIVKICDF 185 (302)
T ss_pred EecCCceEEEEEcCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC--eehhhhccceEEEcCCCeEEECCC
Confidence 999999999999999999999997543 33899999999999999999999998 999999999999999999999999
Q ss_pred CCCcccccccc--cccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCChHHHHHHhhcccccccC
Q 003963 651 GLSRLKHETYL--TTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELAT-EKIPWDNLNSMQVIGAVGFMNQRLEI 727 (783)
Q Consensus 651 Gla~~~~~~~~--~~~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~~~ 727 (783)
|++........ ......++..|+|||.+.+..++.++|||||||++|+|++ |..||.....................
T Consensus 186 g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~ 265 (302)
T cd05055 186 GLARDIMNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSNPYPGMPVDSKFYKLIKEGYRMAQ 265 (302)
T ss_pred cccccccCCCceeecCCCCcccccCCHhhhccCCCCcHhHHHHHHHHHHHHHhCCCCCcCCCCchHHHHHHHHcCCcCCC
Confidence 99875443211 1122345778999999999999999999999999999998 99999877655443333222223345
Q ss_pred CCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHH
Q 003963 728 PKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDL 763 (783)
Q Consensus 728 ~~~~s~~l~~LI~~cL~~dP~~RPsa~ell~~L~~L 763 (783)
+...++++.+|+.+||.++|++||++.++++.|+++
T Consensus 266 ~~~~~~~~~~li~~cl~~~p~~Rpt~~ell~~l~~~ 301 (302)
T cd05055 266 PEHAPAEIYDIMKTCWDADPLKRPTFKQIVQLIGKQ 301 (302)
T ss_pred CCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHhh
Confidence 566789999999999999999999999999998764
No 189
>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as
Probab=100.00 E-value=2.2e-37 Score=331.67 Aligned_cols=255 Identities=22% Similarity=0.331 Sum_probs=211.2
Q ss_pred ceeEeeeeccCCcEEEEEEEEeC-CceEEEEEEecccCCH-HHHHHHHHHHHHHHhCCCCceeeEeceeecCCceEEEEE
Q 003963 506 DLTIGEQIGQGSCGTVYHAVWYG-SQDVAVKVFSRQEYSD-EVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIVTE 583 (783)
Q Consensus 506 ~y~i~~~LG~G~fG~Vy~a~~~~-~~~vAiK~i~~~~~~~-~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lV~E 583 (783)
.|++.+.||+|+||.||++.+.. ++.||+|.+....... .....+.+|+.+++.++|+||+.+++.+...+.+|+|||
T Consensus 1 ~f~~~~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e 80 (285)
T cd05630 1 TFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLT 80 (285)
T ss_pred CceeeEEeecCCCeEEEEEEEcCCCceEEEEEEehhhccchHHHHHHHHHHHHHHhCCCCCeeeeeEEEecCCEEEEEEE
Confidence 37788999999999999999865 5689999987654332 334567789999999999999999999999999999999
Q ss_pred ecCCCCHHHHHhhc-CCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCccccccccc
Q 003963 584 FLPRGSLFRLLQRN-TTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETYLT 662 (783)
Q Consensus 584 ~~~ggsL~~~L~~~-~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~~~ 662 (783)
|+++++|.+++... ...+++..++.++.|++.||.|||+++ |+|+||||+||+++.++.++|+|||++....... .
T Consensus 81 ~~~g~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~--iiH~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~-~ 157 (285)
T cd05630 81 LMNGGDLKFHIYHMGEAGFEEGRAVFYAAEICCGLEDLHQER--IVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQ-T 157 (285)
T ss_pred ecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCC--EEeCCCCHHHEEECCCCCEEEeeccceeecCCCc-c
Confidence 99999999988543 345899999999999999999999998 9999999999999999999999999987544322 2
Q ss_pred ccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHH---HHHHhhcccccccCCCCCCHHHHHHH
Q 003963 663 TKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQ---VIGAVGFMNQRLEIPKDVDPRWAAIV 739 (783)
Q Consensus 663 ~~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~elltG~~Pf~~~~~~~---~~~~i~~~~~~~~~~~~~s~~l~~LI 739 (783)
.....|++.|+|||++.+..++.++|||||||++|+|++|+.||....... ....+. .......+..+++++.+||
T Consensus 158 ~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~Pf~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~li 236 (285)
T cd05630 158 IKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLV-KEVQEEYSEKFSPDARSLC 236 (285)
T ss_pred ccCCCCCccccChHHHcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCccchHHHHHhhh-hhhhhhcCccCCHHHHHHH
Confidence 223478999999999999999999999999999999999999997654321 111111 1112345667899999999
Q ss_pred HHhhhhCCCCCCC-----HHHHHHHHHHHHHHHhhc
Q 003963 740 ESCWHSDPQCRPS-----FQELVDKLRDLQRQYFQA 770 (783)
Q Consensus 740 ~~cL~~dP~~RPs-----a~ell~~L~~L~~~~f~~ 770 (783)
.+||+.||.+||| +.++ +.|+||+.
T Consensus 237 ~~~l~~~p~~R~s~~~~~~~~~------~~h~~~~~ 266 (285)
T cd05630 237 KMLLCKDPKERLGCQGGGAREV------KEHPLFKQ 266 (285)
T ss_pred HHHhhcCHHHccCCCCCchHHH------HcChhhhc
Confidence 9999999999999 8888 67888865
No 190
>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase. Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions
Probab=100.00 E-value=6.5e-37 Score=324.34 Aligned_cols=260 Identities=35% Similarity=0.618 Sum_probs=218.2
Q ss_pred cccccceeEeeeeccCCcEEEEEEEEeCC----ceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEeceeecCC
Q 003963 501 EILWEDLTIGEQIGQGSCGTVYHAVWYGS----QDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQ 576 (783)
Q Consensus 501 e~~~~~y~i~~~LG~G~fG~Vy~a~~~~~----~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~ 576 (783)
++..++|.+.++||+|+||.||+|.+... ..|+||...... .....+.+.+|+.+++.+.||||+++++++.. .
T Consensus 2 ~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~-~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~-~ 79 (270)
T cd05056 2 EIQREDITLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCT-SPSVREKFLQEAYIMRQFDHPHIVKLIGVITE-N 79 (270)
T ss_pred eechhhceeeeeeCCccceeEEEEEEecCCCCCcceEEEecCCcC-CHHHHHHHHHHHHHHHhCCCCchhceeEEEcC-C
Confidence 44567899999999999999999987543 358999875443 24456788999999999999999999998875 5
Q ss_pred ceEEEEEecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCccc
Q 003963 577 RLCIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLK 656 (783)
Q Consensus 577 ~~~lV~E~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~ 656 (783)
..++||||+++++|.+++......+++..++.++.||+.||.|||+++ ++|+||||+|||++.++.++|+|||++...
T Consensus 80 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~--~~H~dl~p~nili~~~~~~~l~d~g~~~~~ 157 (270)
T cd05056 80 PVWIVMELAPLGELRSYLQVNKYSLDLASLILYSYQLSTALAYLESKR--FVHRDIAARNVLVSSPDCVKLGDFGLSRYL 157 (270)
T ss_pred CcEEEEEcCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCC--eeccccChheEEEecCCCeEEccCceeeec
Confidence 578999999999999999876666899999999999999999999998 999999999999999999999999998755
Q ss_pred ccccc-cccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCChHHHHHHhhcccccccCCCCCCHH
Q 003963 657 HETYL-TTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELAT-EKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPR 734 (783)
Q Consensus 657 ~~~~~-~~~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~ 734 (783)
..... ......++..|+|||.+.+..++.++|||||||++|+|++ |..||......+....+.. ......+..++..
T Consensus 158 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 236 (270)
T cd05056 158 EDESYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMLGVKPFQGVKNNDVIGRIEN-GERLPMPPNCPPT 236 (270)
T ss_pred ccccceecCCCCccccccChhhhccCCCCchhhhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHc-CCcCCCCCCCCHH
Confidence 43321 1112234568999999988889999999999999999986 9999988877665555432 2344567788999
Q ss_pred HHHHHHHhhhhCCCCCCCHHHHHHHHHHHHH
Q 003963 735 WAAIVESCWHSDPQCRPSFQELVDKLRDLQR 765 (783)
Q Consensus 735 l~~LI~~cL~~dP~~RPsa~ell~~L~~L~~ 765 (783)
+.++|.+||..+|.+||++.+++..|+++..
T Consensus 237 ~~~li~~~l~~~P~~Rpt~~~~~~~l~~~~~ 267 (270)
T cd05056 237 LYSLMTKCWAYDPSKRPRFTELKAQLSDILQ 267 (270)
T ss_pred HHHHHHHHcCCChhhCcCHHHHHHHHHHHHh
Confidence 9999999999999999999999999988754
No 191
>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi
Probab=100.00 E-value=2.8e-37 Score=331.16 Aligned_cols=252 Identities=23% Similarity=0.441 Sum_probs=218.7
Q ss_pred cceeEeeeeccCCcEEEEEEEEeC-CceEEEEEEecccCC-HHHHHHHHHHHHHHHhCCCCceeeEeceeecCCceEEEE
Q 003963 505 EDLTIGEQIGQGSCGTVYHAVWYG-SQDVAVKVFSRQEYS-DEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIVT 582 (783)
Q Consensus 505 ~~y~i~~~LG~G~fG~Vy~a~~~~-~~~vAiK~i~~~~~~-~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lV~ 582 (783)
++|++.+.||+|+||.||++.+.. ++.||+|++...... ......+.+|+.+++.++||||+++++++...+.+|+||
T Consensus 1 ~~y~~~~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 80 (290)
T cd05580 1 DDFEFIKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIRHPFLVNLYGSFQDDSNLYLVM 80 (290)
T ss_pred CceEEEEEeecCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCccceeeEEEcCCeEEEEE
Confidence 479999999999999999999864 578999998765432 344567889999999999999999999999999999999
Q ss_pred EecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCccccccccc
Q 003963 583 EFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETYLT 662 (783)
Q Consensus 583 E~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~~~ 662 (783)
||+++++|.+++... ..+++..+..++.||+.||.|||+.+ |+|+||+|.||||+.++.+||+|||++......
T Consensus 81 e~~~~~~L~~~~~~~-~~l~~~~~~~~~~qil~~l~~lH~~~--i~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~--- 154 (290)
T cd05580 81 EYVPGGELFSHLRKS-GRFPEPVARFYAAQVVLALEYLHSLD--IVYRDLKPENLLLDSDGYIKITDFGFAKRVKGR--- 154 (290)
T ss_pred ecCCCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCC--EecCCCCHHHEEECCCCCEEEeeCCCccccCCC---
Confidence 999999999999765 46899999999999999999999988 999999999999999999999999998765443
Q ss_pred ccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhcccccccCCCCCCHHHHHHHHHh
Q 003963 663 TKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAAIVESC 742 (783)
Q Consensus 663 ~~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~l~~LI~~c 742 (783)
.....|++.|+|||.+.+...+.++||||||+++|+|++|..||...+.......+. .....++..++..++++|.+|
T Consensus 155 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~li~~~ 232 (290)
T cd05580 155 TYTLCGTPEYLAPEIILSKGYGKAVDWWALGILIYEMLAGYPPFFDDNPIQIYEKIL--EGKVRFPSFFSPDAKDLIRNL 232 (290)
T ss_pred CCCCCCCccccChhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHh--cCCccCCccCCHHHHHHHHHH
Confidence 234468999999999988888999999999999999999999998877655554442 445667788899999999999
Q ss_pred hhhCCCCCC-----CHHHHHHHHHHHHHHHhhc
Q 003963 743 WHSDPQCRP-----SFQELVDKLRDLQRQYFQA 770 (783)
Q Consensus 743 L~~dP~~RP-----sa~ell~~L~~L~~~~f~~ 770 (783)
|..||.+|+ ++.++ +.|+||+.
T Consensus 233 l~~~p~~R~~~~~~~~~~l------~~~~~~~~ 259 (290)
T cd05580 233 LQVDLTKRLGNLKNGVNDI------KNHPWFAG 259 (290)
T ss_pred ccCCHHHccCcccCCHHHH------HcCccccc
Confidence 999999999 77888 56788754
No 192
>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin
Probab=100.00 E-value=4.2e-37 Score=333.76 Aligned_cols=260 Identities=23% Similarity=0.394 Sum_probs=217.6
Q ss_pred cceeEeeeeccCCcEEEEEEEEeC-CceEEEEEEecccCCH-HHHHHHHHHHHHHHhCCCCceeeEeceeecCCceEEEE
Q 003963 505 EDLTIGEQIGQGSCGTVYHAVWYG-SQDVAVKVFSRQEYSD-EVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIVT 582 (783)
Q Consensus 505 ~~y~i~~~LG~G~fG~Vy~a~~~~-~~~vAiK~i~~~~~~~-~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lV~ 582 (783)
++|++.+.||+|+||.||+|.+.. ++.||||.+....... .....+..|+++++.++||||+++++.+......|+||
T Consensus 1 ~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~ 80 (316)
T cd05574 1 KHFKKIKLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATLDHPFLPTLYASFQTETYLCLVM 80 (316)
T ss_pred CceEEeeeecCCccEEEEEEEEcCCCcEEEEEEEeccccchHHHHHHHHHHHHHHHhCCCCCchhheeeeecCCEEEEEE
Confidence 479999999999999999999865 6789999998765443 45667889999999999999999999999999999999
Q ss_pred EecCCCCHHHHHhhc-CCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCcccccccc
Q 003963 583 EFLPRGSLFRLLQRN-TTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETYL 661 (783)
Q Consensus 583 E~~~ggsL~~~L~~~-~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~~ 661 (783)
||+.+++|.+++... ...+++..++.++.||+.||+|||+.+ ++|+||||+||+|+.++.++|+|||++........
T Consensus 81 e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~--i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~ 158 (316)
T cd05574 81 DYCPGGELFRLLQRQPGKCLSEEVARFYAAEVLLALEYLHLLG--IVYRDLKPENILLHESGHIMLSDFDLSKQSDVEPP 158 (316)
T ss_pred EecCCCCHHHHHHhCCCCccCHHHHHHHHHHHHHHHHHHHHCC--eeccCCChHHeEEcCCCCEEEeecchhhccccccc
Confidence 999999999998753 356899999999999999999999998 99999999999999999999999998764322110
Q ss_pred -----------------------------cccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChH
Q 003963 662 -----------------------------TTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSM 712 (783)
Q Consensus 662 -----------------------------~~~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~elltG~~Pf~~~~~~ 712 (783)
......|+..|+|||++.+..++.++|||||||++|+|++|..||...+..
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~ 238 (316)
T cd05574 159 PVSKALRKGSRRSSVNSIPSETFSEEPSFRSNSFVGTEEYIAPEVISGDGHGSAVDWWTLGILLYEMLYGTTPFKGSNRD 238 (316)
T ss_pred ccccccccccccccccccchhhhcccccCCCCCCcCccCCcCHHHHcCCCCCchHHHHHHHHHHHHHhhCCCCCCCCchH
Confidence 111236788999999999998999999999999999999999999887766
Q ss_pred HHHHHhhcccccccCCCCCCHHHHHHHHHhhhhCCCCCCC----HHHHHHHHHHHHHHHhhcCc
Q 003963 713 QVIGAVGFMNQRLEIPKDVDPRWAAIVESCWHSDPQCRPS----FQELVDKLRDLQRQYFQASR 772 (783)
Q Consensus 713 ~~~~~i~~~~~~~~~~~~~s~~l~~LI~~cL~~dP~~RPs----a~ell~~L~~L~~~~f~~~~ 772 (783)
..+..+............+++.+.+||.+||..+|.+||+ +.++ +.|+||+...
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~l------l~~~~~~~~~ 296 (316)
T cd05574 239 ETFSNILKKEVTFPGSPPVSSSARDLIRKLLVKDPSKRLGSKRGAAEI------KQHPFFRGVN 296 (316)
T ss_pred HHHHHHhcCCccCCCccccCHHHHHHHHHHccCCHhHCCCchhhHHHH------HcCchhhcCC
Confidence 6555443222222222337899999999999999999999 7777 6688987653
No 193
>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=4.4e-37 Score=331.12 Aligned_cols=262 Identities=27% Similarity=0.441 Sum_probs=218.6
Q ss_pred cccccceeEeeeeccCCcEEEEEEEEeC-CceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEeceeecCCceE
Q 003963 501 EILWEDLTIGEQIGQGSCGTVYHAVWYG-SQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLC 579 (783)
Q Consensus 501 e~~~~~y~i~~~LG~G~fG~Vy~a~~~~-~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~ 579 (783)
.....+|++.+.||.|+||.||++.+.. ++.|++|.+....... ...+.+|+.+++.+.||||+++++.+......|
T Consensus 16 ~~~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~--~~~~~~e~~~l~~~~h~~v~~~~~~~~~~~~~~ 93 (296)
T cd06654 16 GDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPK--KELIINEILVMRENKNPNIVNYLDSYLVGDELW 93 (296)
T ss_pred CCcccceeeEEEecCCCCeEEEEEEECCCCcEEEEEEEecCCcch--HHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEE
Confidence 3445789999999999999999998754 5789999987655432 356788999999999999999999999999999
Q ss_pred EEEEecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCcccccc
Q 003963 580 IVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHET 659 (783)
Q Consensus 580 lV~E~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~~~ 659 (783)
+||||+++++|.+++... .+++..++.++.|++.||.|||+.+ |+|+||||+|||++.++.++|+|||++......
T Consensus 94 lv~e~~~~~~L~~~~~~~--~~~~~~~~~i~~ql~~aL~~LH~~g--i~H~dLkp~Nill~~~~~~kl~dfg~~~~~~~~ 169 (296)
T cd06654 94 VVMEYLAGGSLTDVVTET--CMDEGQIAAVCRECLQALEFLHSNQ--VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPE 169 (296)
T ss_pred EeecccCCCCHHHHHHhc--CCCHHHHHHHHHHHHHHHHHHHHCC--cccCCCCHHHEEEcCCCCEEECccccchhcccc
Confidence 999999999999998653 4788899999999999999999998 999999999999999999999999998754433
Q ss_pred cccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhcc-cccccCCCCCCHHHHHH
Q 003963 660 YLTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFM-NQRLEIPKDVDPRWAAI 738 (783)
Q Consensus 660 ~~~~~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~elltG~~Pf~~~~~~~~~~~i~~~-~~~~~~~~~~s~~l~~L 738 (783)
........|++.|+|||.+.+..++.++|||||||++|+|++|+.||...........+... ......+..++..+.+|
T Consensus 170 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 249 (296)
T cd06654 170 QSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFRDF 249 (296)
T ss_pred ccccCcccCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCCCCCHHHhHHHHhcCCCCCCCCccccCHHHHHH
Confidence 22223446889999999999888999999999999999999999999876654433222211 11223456688999999
Q ss_pred HHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhcCcCC
Q 003963 739 VESCWHSDPQCRPSFQELVDKLRDLQRQYFQASRST 774 (783)
Q Consensus 739 I~~cL~~dP~~RPsa~ell~~L~~L~~~~f~~~~~~ 774 (783)
|.+||..+|.+||++.++ +.++||...++.
T Consensus 250 i~~~l~~~p~~Rpt~~ei------l~~~~~~~~~~~ 279 (296)
T cd06654 250 LNRCLDMDVEKRGSAKEL------LQHQFLKIAKPL 279 (296)
T ss_pred HHHHCcCCcccCcCHHHH------hhChhhhccCCc
Confidence 999999999999999999 678998766553
No 194
>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a
Probab=100.00 E-value=1.8e-37 Score=324.91 Aligned_cols=252 Identities=31% Similarity=0.524 Sum_probs=216.0
Q ss_pred cceeEeeeeccCCcEEEEEEEEeC-CceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEeceeecCCceEEEEE
Q 003963 505 EDLTIGEQIGQGSCGTVYHAVWYG-SQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIVTE 583 (783)
Q Consensus 505 ~~y~i~~~LG~G~fG~Vy~a~~~~-~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lV~E 583 (783)
++|++.++||.|+||.||++.+.. ++.|++|.+..... ...+.+|+++++.++||||+++++++.....+|++||
T Consensus 3 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~----~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e 78 (256)
T cd06612 3 EVFDILEKLGEGSYGSVYKAIHKETGQVVAIKVVPVEED----LQEIIKEISILKQCDSPYIVKYYGSYFKNTDLWIVME 78 (256)
T ss_pred ccchhhhhhcCCCCeEEEEEEEcCCCcEEEEEEeecHHH----HHHHHHHHHHHHhCCCCcEeeeeeeeecCCcEEEEEe
Confidence 679999999999999999999875 57899999865422 5688899999999999999999999999999999999
Q ss_pred ecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCcccccccccc
Q 003963 584 FLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETYLTT 663 (783)
Q Consensus 584 ~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~~~~ 663 (783)
|+++++|.+++......+++..++.++.|++.||.|||+.+ |+|+||+|.||+++.++.++|+|||++..........
T Consensus 79 ~~~~~~L~~~l~~~~~~l~~~~~~~~~~~l~~~l~~lh~~~--i~H~dl~~~ni~~~~~~~~~l~dfg~~~~~~~~~~~~ 156 (256)
T cd06612 79 YCGAGSVSDIMKITNKTLTEEEIAAILYQTLKGLEYLHSNK--KIHRDIKAGNILLNEEGQAKLADFGVSGQLTDTMAKR 156 (256)
T ss_pred cCCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCC--cccCCCCcceEEECCCCcEEEcccccchhcccCcccc
Confidence 99999999999876777999999999999999999999998 9999999999999999999999999988665443333
Q ss_pred cCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhc-ccccccCCCCCCHHHHHHHHHh
Q 003963 664 KTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGF-MNQRLEIPKDVDPRWAAIVESC 742 (783)
Q Consensus 664 ~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~elltG~~Pf~~~~~~~~~~~i~~-~~~~~~~~~~~s~~l~~LI~~c 742 (783)
....++..|+|||++.+..++.++|||||||++|+|++|+.||...........+.. .......+..++..+.+||.+|
T Consensus 157 ~~~~~~~~y~~PE~~~~~~~~~~~Di~s~G~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 236 (256)
T cd06612 157 NTVIGTPFWMAPEVIQEIGYNNKADIWSLGITAIEMAEGKPPYSDIHPMRAIFMIPNKPPPTLSDPEKWSPEFNDFVKKC 236 (256)
T ss_pred ccccCCccccCHHHHhcCCCCchhhHHHHHHHHHHHHhCCCCCCCcchhhhhhhhccCCCCCCCchhhcCHHHHHHHHHH
Confidence 345578999999999999999999999999999999999999987766554433321 1122334556788999999999
Q ss_pred hhhCCCCCCCHHHHHHHHHHHHHHHh
Q 003963 743 WHSDPQCRPSFQELVDKLRDLQRQYF 768 (783)
Q Consensus 743 L~~dP~~RPsa~ell~~L~~L~~~~f 768 (783)
|+.+|.+||++.++ |.++||
T Consensus 237 l~~~P~~Rps~~~i------l~~~~~ 256 (256)
T cd06612 237 LVKDPEERPSAIQL------LQHPFI 256 (256)
T ss_pred HhcChhhCcCHHHH------hcCCCC
Confidence 99999999999999 556664
No 195
>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase. Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ
Probab=100.00 E-value=1.7e-37 Score=328.59 Aligned_cols=254 Identities=28% Similarity=0.445 Sum_probs=208.9
Q ss_pred ccceeEeeeeccCCcEEEEEEEEeC-CceEEEEEEecccCCHHHHHHHHHHHHHHHhC-CCCceeeEeceeecC------
Q 003963 504 WEDLTIGEQIGQGSCGTVYHAVWYG-SQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRL-RHPNVLLFMGAVTSP------ 575 (783)
Q Consensus 504 ~~~y~i~~~LG~G~fG~Vy~a~~~~-~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l-~HpnIv~l~~~~~~~------ 575 (783)
.+.|++.+.||+|+||.||+|.+.. ++.||+|++...... ...+.+|+.+++.+ +||||+++++++...
T Consensus 5 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~---~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~ 81 (272)
T cd06637 5 AGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDE---EEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMD 81 (272)
T ss_pred hhhhhHHHheeecCCeEEEEEEEcCCCcEEEEEEEEcCCcc---HHHHHHHHHHHHHhcCCCCeeeEeeEEeecCCCCCC
Confidence 3578889999999999999998765 467999998654322 24677899999998 699999999998653
Q ss_pred CceEEEEEecCCCCHHHHHhhc-CCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCc
Q 003963 576 QRLCIVTEFLPRGSLFRLLQRN-TTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSR 654 (783)
Q Consensus 576 ~~~~lV~E~~~ggsL~~~L~~~-~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~ 654 (783)
..+|++|||+++++|.+++... ...+++..+..++.|++.||+|||+++ |+|+||||+||++++++.++|+|||++.
T Consensus 82 ~~~~iv~e~~~~~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~--ivh~dl~~~nili~~~~~~~l~Dfg~~~ 159 (272)
T cd06637 82 DQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHK--VIHRDIKGQNVLLTENAEVKLVDFGVSA 159 (272)
T ss_pred cEEEEEEEcCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCC--CccCCCCHHHEEECCCCCEEEccCCCce
Confidence 4589999999999999999763 346889999999999999999999998 9999999999999999999999999987
Q ss_pred ccccccccccCCCCCCcccCccccc-----CCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhcccccccCCC
Q 003963 655 LKHETYLTTKTGKGTPQWMAPEVLR-----NEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLEIPK 729 (783)
Q Consensus 655 ~~~~~~~~~~~~~Gt~~Y~aPE~~~-----~~~~s~~sDIwSLG~il~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~ 729 (783)
.............|++.|+|||++. +..++.++|||||||++|+|++|..||...........+.........+.
T Consensus 160 ~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGv~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 239 (272)
T cd06637 160 QLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALFLIPRNPAPRLKSK 239 (272)
T ss_pred ecccccccCCcccccccccCHhHhccccCcCCCCCchhhHHHHHHHHHHHHhCCCCccccCHHHHHHHHhcCCCCCCCCC
Confidence 6544333344567899999999986 34578899999999999999999999987665544433322222333445
Q ss_pred CCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHh
Q 003963 730 DVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYF 768 (783)
Q Consensus 730 ~~s~~l~~LI~~cL~~dP~~RPsa~ell~~L~~L~~~~f 768 (783)
.++..+.+||.+||..+|.+||++.++ +.|+||
T Consensus 240 ~~~~~~~~li~~~l~~~p~~Rpt~~~i------l~~~~~ 272 (272)
T cd06637 240 KWSKKFQSFIESCLVKNHSQRPTTEQL------MKHPFI 272 (272)
T ss_pred CcCHHHHHHHHHHcCCChhhCCCHHHH------hhCCCC
Confidence 678999999999999999999999999 566765
No 196
>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase. Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa
Probab=100.00 E-value=6.2e-37 Score=322.88 Aligned_cols=256 Identities=31% Similarity=0.574 Sum_probs=216.5
Q ss_pred ccccccceeEeeeeccCCcEEEEEEEEeCCceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEeceeecCCceE
Q 003963 500 YEILWEDLTIGEQIGQGSCGTVYHAVWYGSQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLC 579 (783)
Q Consensus 500 ~e~~~~~y~i~~~LG~G~fG~Vy~a~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~ 579 (783)
|++..++|++.++||+|+||.||++.+..+..+++|++.... .....+.+|+.+++.++|+||+++++++.. ...+
T Consensus 1 ~~~~~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~iK~~~~~~---~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-~~~~ 76 (260)
T cd05073 1 WEIPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGS---MSVEAFLAEANVMKTLQHDKLVKLHAVVTK-EPIY 76 (260)
T ss_pred CcccccceeEEeEecCccceEEEEEEecCCccEEEEecCCCh---hHHHHHHHHHHHHHhcCCCCcceEEEEEcC-CCeE
Confidence 567788999999999999999999987777789999876532 234678889999999999999999999887 7789
Q ss_pred EEEEecCCCCHHHHHhhc-CCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCccccc
Q 003963 580 IVTEFLPRGSLFRLLQRN-TTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHE 658 (783)
Q Consensus 580 lV~E~~~ggsL~~~L~~~-~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~~ 658 (783)
++|||+++++|.+++... ...+++..+..++.||+.||.|||+.+ ++|+||||+||+++.++.+||+|||++.....
T Consensus 77 ~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~--i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~ 154 (260)
T cd05073 77 IITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRN--YIHRDLRAANILVSASLVCKIADFGLARVIED 154 (260)
T ss_pred EEEEeCCCCcHHHHHHhCCccccCHHHHHHHHHHHHHHHHHHHhCC--ccccccCcceEEEcCCCcEEECCCcceeeccC
Confidence 999999999999999753 345788889999999999999999988 99999999999999999999999999875543
Q ss_pred ccc-cccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCChHHHHHHhhcccccccCCCCCCHHHH
Q 003963 659 TYL-TTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELAT-EKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWA 736 (783)
Q Consensus 659 ~~~-~~~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~l~ 736 (783)
... ......++..|+|||++.+..++.++|+|||||++|+|++ |+.||...+.......+. .......+...+.++.
T Consensus 155 ~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 233 (260)
T cd05073 155 NEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALE-RGYRMPRPENCPEELY 233 (260)
T ss_pred CCcccccCCcccccccCHhHhccCCcCccccchHHHHHHHHHHhcCCCCCCCCCHHHHHHHHh-CCCCCCCcccCCHHHH
Confidence 211 1122345678999999998889999999999999999999 999998877766555443 2223445567889999
Q ss_pred HHHHHhhhhCCCCCCCHHHHHHHHHH
Q 003963 737 AIVESCWHSDPQCRPSFQELVDKLRD 762 (783)
Q Consensus 737 ~LI~~cL~~dP~~RPsa~ell~~L~~ 762 (783)
+++.+||..+|.+||++.++++.|+.
T Consensus 234 ~~i~~~l~~~p~~Rp~~~~l~~~L~~ 259 (260)
T cd05073 234 NIMMRCWKNRPEERPTFEYIQSVLDD 259 (260)
T ss_pred HHHHHHcccCcccCcCHHHHHHHHhc
Confidence 99999999999999999999998865
No 197
>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein. Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi
Probab=100.00 E-value=8.4e-37 Score=327.34 Aligned_cols=256 Identities=30% Similarity=0.566 Sum_probs=214.6
Q ss_pred ceeEeeeeccCCcEEEEEEEEeC------CceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEeceeecCCceE
Q 003963 506 DLTIGEQIGQGSCGTVYHAVWYG------SQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLC 579 (783)
Q Consensus 506 ~y~i~~~LG~G~fG~Vy~a~~~~------~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~ 579 (783)
+|++.+.||+|+||.||+|.+.. ...+++|++.... .......+.+|+.+++.++||||+++++.+...+..+
T Consensus 1 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 79 (290)
T cd05045 1 NLVLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENA-SSSELRDLLSEFNLLKQVNHPHVIKLYGACSQDGPLL 79 (290)
T ss_pred CccccccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCC-CHHHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCCcE
Confidence 47889999999999999998642 1358888876543 2334567889999999999999999999999999999
Q ss_pred EEEEecCCCCHHHHHhhc-----------------------CCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCC
Q 003963 580 IVTEFLPRGSLFRLLQRN-----------------------TTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSN 636 (783)
Q Consensus 580 lV~E~~~ggsL~~~L~~~-----------------------~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~N 636 (783)
++|||+.+++|.+++... ...+++..++.++.|++.||.|||+++ |+||||||+|
T Consensus 80 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~--ivH~dikp~n 157 (290)
T cd05045 80 LIVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLAEMK--LVHRDLAARN 157 (290)
T ss_pred EEEEecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHHHCC--eehhhhhhhe
Confidence 999999999999998642 134788899999999999999999998 9999999999
Q ss_pred EEEcCCCcEEEEecCCCccccccc--ccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCChHH
Q 003963 637 LLVDKHWTVKVGDFGLSRLKHETY--LTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELAT-EKIPWDNLNSMQ 713 (783)
Q Consensus 637 ILl~~~~~vkL~DFGla~~~~~~~--~~~~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~ellt-G~~Pf~~~~~~~ 713 (783)
||+++++.+||+|||+++...... .......++..|+|||.+.+..++.++|||||||++|+|++ |..||......+
T Consensus 158 ill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~ 237 (290)
T cd05045 158 VLVAEGRKMKISDFGLSRDVYEEDSYVKRSKGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIAPER 237 (290)
T ss_pred EEEcCCCcEEeccccccccccCccchhcccCCCCCccccCHHHHccCCcchHhHHHHHHHHHHHHHhcCCCCCCCCCHHH
Confidence 999999999999999987543221 11223345678999999998889999999999999999998 999998887766
Q ss_pred HHHHhhcccccccCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHH
Q 003963 714 VIGAVGFMNQRLEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQR 765 (783)
Q Consensus 714 ~~~~i~~~~~~~~~~~~~s~~l~~LI~~cL~~dP~~RPsa~ell~~L~~L~~ 765 (783)
....+. .......+..++.++.+||..||+.+|.+||++.++++.|+++.+
T Consensus 238 ~~~~~~-~~~~~~~~~~~~~~~~~~i~~cl~~~P~~Rp~~~~i~~~l~~~~~ 288 (290)
T cd05045 238 LFNLLK-TGYRMERPENCSEEMYNLMLTCWKQEPDKRPTFADISKELEKMMV 288 (290)
T ss_pred HHHHHh-CCCCCCCCCCCCHHHHHHHHHHccCCcccCCCHHHHHHHHHHHHh
Confidence 555443 223445577789999999999999999999999999999988754
No 198
>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa
Probab=100.00 E-value=6.9e-37 Score=321.06 Aligned_cols=251 Identities=25% Similarity=0.411 Sum_probs=217.9
Q ss_pred ceeEeeeeccCCcEEEEEEEEeC-CceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEeceeecCCceEEEEEe
Q 003963 506 DLTIGEQIGQGSCGTVYHAVWYG-SQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIVTEF 584 (783)
Q Consensus 506 ~y~i~~~LG~G~fG~Vy~a~~~~-~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lV~E~ 584 (783)
+|++.+.||.|+||.||.+.... ++.+++|.+............+.+|+.+++.++|+||+++++++...+.++++|||
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~~~e~ 80 (256)
T cd08221 1 HYIPIRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRLSEKERRDALNEIVILSLLQHPNIIAYYNHFMDDNTLLIEMEY 80 (256)
T ss_pred CceEeeEecccCCceEEEEEEcCCCcEEEEEEEeecccchhHHHHHHHHHHHHHhCCCCCeeEEEeEEecCCeEEEEEEe
Confidence 58999999999999999998754 56799999887666666677888999999999999999999999999999999999
Q ss_pred cCCCCHHHHHhhc-CCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCcccccccccc
Q 003963 585 LPRGSLFRLLQRN-TTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETYLTT 663 (783)
Q Consensus 585 ~~ggsL~~~L~~~-~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~~~~ 663 (783)
|++++|.+++... ...+++..+..++.|++.+|.|||+.+ ++|+||||+||+++.++.+||+|||++..........
T Consensus 81 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~--i~h~dl~p~ni~~~~~~~~kl~d~~~~~~~~~~~~~~ 158 (256)
T cd08221 81 ANGGTLYDKIVRQKGQLFEEEMVLWYLFQIVSAVSYIHKAG--ILHRDIKTLNIFLTKAGLIKLGDFGISKILGSEYSMA 158 (256)
T ss_pred cCCCcHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCC--ccccCCChHhEEEeCCCCEEECcCcceEEcccccccc
Confidence 9999999999764 456899999999999999999999998 9999999999999999999999999987655443233
Q ss_pred cCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhcccccccCCCCCCHHHHHHHHHhh
Q 003963 664 KTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAAIVESCW 743 (783)
Q Consensus 664 ~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~l~~LI~~cL 743 (783)
....|++.|+|||.+.+..++.++|+|||||++|+|++|..||...+..+....+.. ......+..++.++.++|.+||
T Consensus 159 ~~~~~~~~y~ape~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~i~~~l 237 (256)
T cd08221 159 ETVVGTPYYMSPELCQGVKYNFKSDIWALGCVLYELLTLKRTFDATNPLNLVVKIVQ-GNYTPVVSVYSSELISLVHSLL 237 (256)
T ss_pred cccCCCccccCHhhcCCCCCCCcchhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHc-CCCCCCccccCHHHHHHHHHHc
Confidence 455689999999999988889999999999999999999999988777666555532 2233345668899999999999
Q ss_pred hhCCCCCCCHHHHHHH
Q 003963 744 HSDPQCRPSFQELVDK 759 (783)
Q Consensus 744 ~~dP~~RPsa~ell~~ 759 (783)
..+|.+||++.+++++
T Consensus 238 ~~~p~~R~s~~~ll~~ 253 (256)
T cd08221 238 QQDPEKRPTADEVLDQ 253 (256)
T ss_pred ccCcccCCCHHHHhhC
Confidence 9999999999999654
No 199
>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4. Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.
Probab=100.00 E-value=3.7e-37 Score=325.03 Aligned_cols=254 Identities=30% Similarity=0.493 Sum_probs=214.0
Q ss_pred ceeEeeeeccCCcEEEEEEEEeCCceEEEEEEecccCC----HHHHHHHHHHHHHHHhCCCCceeeEeceeecCCceEEE
Q 003963 506 DLTIGEQIGQGSCGTVYHAVWYGSQDVAVKVFSRQEYS----DEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIV 581 (783)
Q Consensus 506 ~y~i~~~LG~G~fG~Vy~a~~~~~~~vAiK~i~~~~~~----~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lV 581 (783)
+|++.+.||.|+||.||+|....++.+|+|.+...... ......+.+|+.+++.++|+||+++++++...+.++++
T Consensus 1 ~~~~~~~ig~g~~~~v~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv 80 (265)
T cd06631 1 EWTKGEVLGKGAYGTVYCGLTNQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIVQYLGTCLDDNTISIF 80 (265)
T ss_pred CccccceEeccCCeEEEEEEEcCCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcCCCCEeeEeeEeecCCeEEEE
Confidence 47889999999999999998877778999998754322 23456788999999999999999999999999999999
Q ss_pred EEecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCcccccc--
Q 003963 582 TEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHET-- 659 (783)
Q Consensus 582 ~E~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~~~-- 659 (783)
|||+++++|.+++.+. ..+++..+..++.|++.||+|||+.+ |+|+||||+||+++.++.++|+|||++......
T Consensus 81 ~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~--i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~ 157 (265)
T cd06631 81 MEFVPGGSISSILNRF-GPLPEPVFCKYTKQILDGVAYLHNNC--VVHRDIKGNNVMLMPNGIIKLIDFGCARRLAWVGL 157 (265)
T ss_pred EecCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCC--cccCCcCHHhEEECCCCeEEeccchhhHhhhhccc
Confidence 9999999999999764 35889999999999999999999988 999999999999999999999999998754211
Q ss_pred ----cccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhcc-cccccCCCCCCHH
Q 003963 660 ----YLTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFM-NQRLEIPKDVDPR 734 (783)
Q Consensus 660 ----~~~~~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~elltG~~Pf~~~~~~~~~~~i~~~-~~~~~~~~~~s~~ 734 (783)
........|+..|+|||++.+..++.++|+|||||++|+|++|..||...+.......+... .....++..++.+
T Consensus 158 ~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (265)
T cd06631 158 HGTHSNMLKSMHGTPYWMAPEVINESGYGRKSDIWSIGCTVFEMATGKPPLASMDRLAAMFYIGAHRGLMPRLPDSFSAA 237 (265)
T ss_pred cccccccccccCCCccccChhhhcCCCCcchhhHHHHHHHHHHHHhCCCccccCChHHHHHHhhhccCCCCCCCCCCCHH
Confidence 11122345889999999999988999999999999999999999999876655444333222 2234567778999
Q ss_pred HHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHh
Q 003963 735 WAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYF 768 (783)
Q Consensus 735 l~~LI~~cL~~dP~~RPsa~ell~~L~~L~~~~f 768 (783)
+.+||.+||.++|.+||++.++ +.|+||
T Consensus 238 ~~~~i~~~l~~~p~~Rp~~~~~------l~~~~~ 265 (265)
T cd06631 238 AIDFVTSCLTRDQHERPSALQL------LRHDFL 265 (265)
T ss_pred HHHHHHHHhcCCcccCCCHHHH------hcCCCC
Confidence 9999999999999999999999 566665
No 200
>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5. Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p
Probab=100.00 E-value=4.3e-37 Score=327.90 Aligned_cols=251 Identities=28% Similarity=0.445 Sum_probs=206.8
Q ss_pred cceeEeeeeccCCcEEEEEEEEeC-CceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEeceeecCCceEEEEE
Q 003963 505 EDLTIGEQIGQGSCGTVYHAVWYG-SQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIVTE 583 (783)
Q Consensus 505 ~~y~i~~~LG~G~fG~Vy~a~~~~-~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lV~E 583 (783)
++|++.++||+|+||.||+|.+.. ++.||+|++.... .......+.+|+.+++.++||||+++++++..++..++|||
T Consensus 1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 79 (279)
T cd06619 1 QDIQYQEILGHGNGGTVYKAYHLLTRRILAVKVIPLDI-TVELQKQIMSELEILYKCDSPYIIGFYGAFFVENRISICTE 79 (279)
T ss_pred CcchheeeeccCCCeEEEEEEEcCCCcEEEEEEEecCC-ChHHHHHHHHHHHHHHhCCCCCeeeEEEEEEECCEEEEEEe
Confidence 468889999999999999998754 4679999987543 34445678899999999999999999999999999999999
Q ss_pred ecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCcccccccccc
Q 003963 584 FLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETYLTT 663 (783)
Q Consensus 584 ~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~~~~ 663 (783)
|+++++|..+. .+++..+..++.|++.||.|||+.+ |+|+||||+|||++.++.++|+|||++...... ..
T Consensus 80 ~~~~~~l~~~~-----~~~~~~~~~~~~qi~~~l~~lH~~~--i~H~dlkp~Nill~~~~~~~l~dfg~~~~~~~~--~~ 150 (279)
T cd06619 80 FMDGGSLDVYR-----KIPEHVLGRIAVAVVKGLTYLWSLK--ILHRDVKPSNMLVNTRGQVKLCDFGVSTQLVNS--IA 150 (279)
T ss_pred cCCCCChHHhh-----cCCHHHHHHHHHHHHHHHHHHHHCC--EeeCCCCHHHEEECCCCCEEEeeCCcceecccc--cc
Confidence 99999986542 3678888999999999999999998 999999999999999999999999998755433 22
Q ss_pred cCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChH-------HHHHHhhcccccccCCCCCCHHHH
Q 003963 664 KTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSM-------QVIGAVGFMNQRLEIPKDVDPRWA 736 (783)
Q Consensus 664 ~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~elltG~~Pf~~~~~~-------~~~~~i~~~~~~~~~~~~~s~~l~ 736 (783)
....|+..|+|||++.+..++.++|+|||||++|+|++|..||...... .....+............+++++.
T Consensus 151 ~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (279)
T cd06619 151 KTYVGTNAYMAPERISGEQYGIHSDVWSLGISFMELALGRFPYPQIQKNQGSLMPLQLLQCIVDEDPPVLPVGQFSEKFV 230 (279)
T ss_pred cCCCCChhhcCceeecCCCCCCcchHHHHHHHHHHHHhCCCCchhhcccccccchHHHHHHHhccCCCCCCCCcCCHHHH
Confidence 3457899999999999999999999999999999999999999653321 111111111111112345788999
Q ss_pred HHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhcC
Q 003963 737 AIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQAS 771 (783)
Q Consensus 737 ~LI~~cL~~dP~~RPsa~ell~~L~~L~~~~f~~~ 771 (783)
+||.+||+.+|.+||++.++ +.++||+..
T Consensus 231 ~li~~~l~~~P~~Rp~~~ei------l~~~~~~~~ 259 (279)
T cd06619 231 HFITQCMRKQPKERPAPENL------MDHPFIVQY 259 (279)
T ss_pred HHHHHHhhCChhhCCCHHHH------hcCcccccc
Confidence 99999999999999999999 678888654
No 201
>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also
Probab=100.00 E-value=1.5e-37 Score=331.46 Aligned_cols=254 Identities=25% Similarity=0.345 Sum_probs=205.1
Q ss_pred ceeEeeeeccCCcEEEEEEEEeC-CceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEeceeecCCceEEEEEe
Q 003963 506 DLTIGEQIGQGSCGTVYHAVWYG-SQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIVTEF 584 (783)
Q Consensus 506 ~y~i~~~LG~G~fG~Vy~a~~~~-~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lV~E~ 584 (783)
+|++.+.||+|+||.||+|.+.. ++.|++|++............+.+|+.+++.++||||+++++++.....+++++||
T Consensus 1 ~y~~~~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 80 (284)
T cd07839 1 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLYDVLHSDKKLTLVFEY 80 (284)
T ss_pred CceeEEEecccCCeEEEEEEECCCCcEEEEEEeecccccccCccchhHHHHHHHhcCCCCeeeHHHHhccCCceEEEEec
Confidence 58899999999999999999864 56799999876544333345677899999999999999999999999999999999
Q ss_pred cCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCccccccccccc
Q 003963 585 LPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETYLTTK 664 (783)
Q Consensus 585 ~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~~~~~ 664 (783)
++ ++|.+++......+++..++.++.||+.||.|||+++ |+|+||||+||+++.++.++|+|||++...........
T Consensus 81 ~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~--i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~ 157 (284)
T cd07839 81 CD-QDLKKYFDSCNGDIDPEIVKSFMFQLLKGLAFCHSHN--VLHRDLKPQNLLINKNGELKLADFGLARAFGIPVRCYS 157 (284)
T ss_pred CC-CCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC--EecCCCCHHHEEEcCCCcEEECccchhhccCCCCCCcC
Confidence 96 5888888765667999999999999999999999998 99999999999999999999999999876544333333
Q ss_pred CCCCCCcccCcccccCCC-CCchhHHHHHHHHHHHHHcCCCCC-CCCChHHHHHHhhccc---------------c---c
Q 003963 665 TGKGTPQWMAPEVLRNEP-SDEKSDVYSFGVILWELATEKIPW-DNLNSMQVIGAVGFMN---------------Q---R 724 (783)
Q Consensus 665 ~~~Gt~~Y~aPE~~~~~~-~s~~sDIwSLG~il~elltG~~Pf-~~~~~~~~~~~i~~~~---------------~---~ 724 (783)
...+++.|+|||++.+.. ++.++|||||||++|+|++|..|| ...+....+..+.... . .
T Consensus 158 ~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (284)
T cd07839 158 AEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEESWPGVSKLPDYKPY 237 (284)
T ss_pred CCccccCCcChHHHhCCcccCcHHHHHHHHHHHHHHHhcCCCCcCCCCHHHHHHHHHHHhCCCChHHhHHhhhccccccc
Confidence 446789999999987754 689999999999999999998885 3333332222211000 0 0
Q ss_pred ---------ccCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHh
Q 003963 725 ---------LEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYF 768 (783)
Q Consensus 725 ---------~~~~~~~s~~l~~LI~~cL~~dP~~RPsa~ell~~L~~L~~~~f 768 (783)
......+++++.+||.+||..||.+|||+.++ +.|+||
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~i------l~h~~f 284 (284)
T cd07839 238 PMYPATTSLVNVVPKLNSTGRDLLQNLLVCNPVQRISAEEA------LQHPYF 284 (284)
T ss_pred CCCCCcchhhhhcccCCHHHHHHHHHHhcCChhhcCCHHHH------hcCCCC
Confidence 01123477899999999999999999999999 556775
No 202
>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re
Probab=100.00 E-value=5.4e-37 Score=322.34 Aligned_cols=251 Identities=33% Similarity=0.604 Sum_probs=211.8
Q ss_pred ccccceeEeeeeccCCcEEEEEEEEeCCceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEeceee-cCCceEE
Q 003963 502 ILWEDLTIGEQIGQGSCGTVYHAVWYGSQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVT-SPQRLCI 580 (783)
Q Consensus 502 ~~~~~y~i~~~LG~G~fG~Vy~a~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~-~~~~~~l 580 (783)
+...+|++.+.||+|+||.||++... +..|++|.+.... ....+.+|+.+++.++|+||+++++++. .....++
T Consensus 3 ~~~~~~~~~~~lg~g~~~~v~~~~~~-~~~~~~k~~~~~~----~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~l 77 (256)
T cd05082 3 LNMKELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA----TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYI 77 (256)
T ss_pred ccHHhCeeeeeecccCCCeEEEEEEc-CCcEEEEEeCCCc----hHHHHHHHHHHHHhCCCCCeeeEEEEEEcCCCceEE
Confidence 44578999999999999999999765 5579999886433 2356888999999999999999999754 5567899
Q ss_pred EEEecCCCCHHHHHhhcCC-cchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCcccccc
Q 003963 581 VTEFLPRGSLFRLLQRNTT-KLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHET 659 (783)
Q Consensus 581 V~E~~~ggsL~~~L~~~~~-~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~~~ 659 (783)
+|||+++++|.+++..... .+++..++.++.||+.||+|||+++ |+|+||||+||+++.++.+||+|||++......
T Consensus 78 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~--i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~ 155 (256)
T cd05082 78 VTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEANN--FVHRDLAARNVLVSEDNVAKVSDFGLTKEASST 155 (256)
T ss_pred EEECCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC--EeccccchheEEEcCCCcEEecCCccceecccc
Confidence 9999999999999976433 4789999999999999999999998 999999999999999999999999998754332
Q ss_pred cccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCChHHHHHHhhcccccccCCCCCCHHHHHH
Q 003963 660 YLTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELAT-EKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAAI 738 (783)
Q Consensus 660 ~~~~~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~l~~L 738 (783)
. ....++..|+|||++.+..++.++|||||||++|+|++ |+.||...........+.. ......+..+++.+.++
T Consensus 156 ~---~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~~l~~~g~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l 231 (256)
T cd05082 156 Q---DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEK-GYKMDAPDGCPPVVYDV 231 (256)
T ss_pred C---CCCccceeecCHHHHccCCCCchhhhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhc-CCCCCCCCCCCHHHHHH
Confidence 2 23344678999999999889999999999999999997 9999988776666555532 23445567789999999
Q ss_pred HHHhhhhCCCCCCCHHHHHHHHHHH
Q 003963 739 VESCWHSDPQCRPSFQELVDKLRDL 763 (783)
Q Consensus 739 I~~cL~~dP~~RPsa~ell~~L~~L 763 (783)
|.+||..+|.+|||+.++++.|+.+
T Consensus 232 i~~~l~~~p~~Rpt~~~l~~~l~~~ 256 (256)
T cd05082 232 MKQCWHLDAATRPSFLQLREQLEHI 256 (256)
T ss_pred HHHHhcCChhhCcCHHHHHHHHhcC
Confidence 9999999999999999999988753
No 203
>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of
Probab=100.00 E-value=4.2e-38 Score=344.34 Aligned_cols=247 Identities=26% Similarity=0.421 Sum_probs=203.6
Q ss_pred eccCCcEEEEEEEEeC-CceEEEEEEecccCC-HHHHHHHHHHHHHHHhC---CCCceeeEeceeecCCceEEEEEecCC
Q 003963 513 IGQGSCGTVYHAVWYG-SQDVAVKVFSRQEYS-DEVIHSFRQEVSLMKRL---RHPNVLLFMGAVTSPQRLCIVTEFLPR 587 (783)
Q Consensus 513 LG~G~fG~Vy~a~~~~-~~~vAiK~i~~~~~~-~~~~~~~~~Ei~il~~l---~HpnIv~l~~~~~~~~~~~lV~E~~~g 587 (783)
||+|+||.||+|.+.. ++.||||++.+.... ......+..|..++..+ .||||+++++++.....+|+||||+++
T Consensus 1 lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~~~~~~~~lv~e~~~~ 80 (330)
T cd05586 1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFIVGLKFSFQTDSDLYLVTDYMSG 80 (330)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhccCCCCcCcceEEEEecCCeEEEEEcCCCC
Confidence 7999999999999865 578999999764332 22334455566776655 699999999999999999999999999
Q ss_pred CCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCcccccccccccCCC
Q 003963 588 GSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETYLTTKTGK 667 (783)
Q Consensus 588 gsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~~ 667 (783)
++|..++... ..+++..+..++.||+.||+|||+++ |+||||||+||||+.++.++|+|||++.............+
T Consensus 81 g~L~~~l~~~-~~~~~~~~~~~~~qil~al~~LH~~~--ivHrDlkp~Nili~~~~~~kl~Dfg~a~~~~~~~~~~~~~~ 157 (330)
T cd05586 81 GELFWHLQKE-GRFSEDRAKFYIAELVLALEHLHKYD--IVYRDLKPENILLDATGHIALCDFGLSKANLTDNKTTNTFC 157 (330)
T ss_pred ChHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCC--eEeccCCHHHeEECCCCCEEEecCCcCcCCCCCCCCccCcc
Confidence 9999998764 46899999999999999999999998 99999999999999999999999999875443333344567
Q ss_pred CCCcccCcccccCC-CCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhcccccccCC-CCCCHHHHHHHHHhhhh
Q 003963 668 GTPQWMAPEVLRNE-PSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLEIP-KDVDPRWAAIVESCWHS 745 (783)
Q Consensus 668 Gt~~Y~aPE~~~~~-~~s~~sDIwSLG~il~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~~-~~~s~~l~~LI~~cL~~ 745 (783)
||+.|+|||++.+. .++.++|||||||++|+|++|..||...+..+....+... ...++ ..+++++.+||.+||.+
T Consensus 158 gt~~y~aPE~~~~~~~~~~~~DvwslGvil~elltG~~Pf~~~~~~~~~~~i~~~--~~~~~~~~~~~~~~~li~~~L~~ 235 (330)
T cd05586 158 GTTEYLAPEVLLDEKGYTKHVDFWSLGVLVFEMCCGWSPFYAEDTQQMYRNIAFG--KVRFPKNVLSDEGRQFVKGLLNR 235 (330)
T ss_pred CCccccCHHHHcCCCCCCCccceeccccEEEEeccCCCCCCCCCHHHHHHHHHcC--CCCCCCccCCHHHHHHHHHHcCC
Confidence 99999999998765 4789999999999999999999999888777666555332 22333 35789999999999999
Q ss_pred CCCCCC----CHHHHHHHHHHHHHHHhhc
Q 003963 746 DPQCRP----SFQELVDKLRDLQRQYFQA 770 (783)
Q Consensus 746 dP~~RP----sa~ell~~L~~L~~~~f~~ 770 (783)
||.+|| ++.++ +.|+||+.
T Consensus 236 ~P~~R~~~~~~~~~l------l~h~~~~~ 258 (330)
T cd05586 236 NPQHRLGAHRDAVEL------KEHPFFAD 258 (330)
T ss_pred CHHHCCCCCCCHHHH------hcCccccC
Confidence 999998 46666 57888864
No 204
>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha. Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype
Probab=100.00 E-value=2.8e-37 Score=337.34 Aligned_cols=256 Identities=23% Similarity=0.388 Sum_probs=206.0
Q ss_pred EeeeeccC--CcEEEEEEEEeC-CceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEeceeecCCceEEEEEec
Q 003963 509 IGEQIGQG--SCGTVYHAVWYG-SQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIVTEFL 585 (783)
Q Consensus 509 i~~~LG~G--~fG~Vy~a~~~~-~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lV~E~~ 585 (783)
++++||+| +|+.||++.+.. ++.||||++............+.+|+.+++.++||||+++++++..++..|+||||+
T Consensus 2 ~~~~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~ 81 (327)
T cd08227 2 LLTVIGRGFEDLMTVNLARYKPTGEYVTVRRINLEACTNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSFM 81 (327)
T ss_pred hhhhccccccceEEEEEEeecccCcEEEEEEechhhccHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEECCEEEEEEecc
Confidence 46789999 789999998765 567999999776655666677889999999999999999999999999999999999
Q ss_pred CCCCHHHHHhhc-CCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCccccccc----
Q 003963 586 PRGSLFRLLQRN-TTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETY---- 660 (783)
Q Consensus 586 ~ggsL~~~L~~~-~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~---- 660 (783)
++++|.+++..+ ...+++..++.++.||+.||+|||+++ |+||||||+|||++.++.++++||+.........
T Consensus 82 ~~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~--iiH~dlkp~Nil~~~~~~~~l~~~~~~~~~~~~~~~~~ 159 (327)
T cd08227 82 AYGSAKDLICTHFMDGMSELAIAYILQGVLKALDYIHHMG--YVHRSVKASHILISVDGKVYLSGLRSNLSMINHGQRLR 159 (327)
T ss_pred CCCcHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCC--EecCCCChhhEEEecCCcEEEcccchhhcccccccccc
Confidence 999999999654 345889999999999999999999998 9999999999999999999999998654322111
Q ss_pred ---ccccCCCCCCcccCcccccC--CCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhcccc------------
Q 003963 661 ---LTTKTGKGTPQWMAPEVLRN--EPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQ------------ 723 (783)
Q Consensus 661 ---~~~~~~~Gt~~Y~aPE~~~~--~~~s~~sDIwSLG~il~elltG~~Pf~~~~~~~~~~~i~~~~~------------ 723 (783)
.......++..|+|||++.+ ..++.++|||||||++|+|++|..||.................
T Consensus 160 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (327)
T cd08227 160 VVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCLLDTTTIPAE 239 (327)
T ss_pred ccccccccccceecccChHHhhcccCCCCchhhHHHHHHHHHHHHHCCCCCCCcchhHHHHHHhcCCccccccccchhhh
Confidence 01122356778999999876 4588999999999999999999999987654433222110000
Q ss_pred --------------------------------cccCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhcC
Q 003963 724 --------------------------------RLEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQAS 771 (783)
Q Consensus 724 --------------------------------~~~~~~~~s~~l~~LI~~cL~~dP~~RPsa~ell~~L~~L~~~~f~~~ 771 (783)
.......+++.+.+||.+||+.||.+|||+.++ ++|+||+..
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~el------l~~p~f~~~ 313 (327)
T cd08227 240 ELTMKPSRSGANSGLGESTTVSTPRPSNGESSSHPYNRTFSPHFHHFVEQCLQRNPDARPSASTL------LNHSFFKQI 313 (327)
T ss_pred hcccCCcccCCcCCCCcccccCCcCccccCCcccccccccCHHHHHHHHHHHhhCchhcCCHHHH------hcChhhhhc
Confidence 001122357789999999999999999999999 688999764
Q ss_pred c
Q 003963 772 R 772 (783)
Q Consensus 772 ~ 772 (783)
.
T Consensus 314 ~ 314 (327)
T cd08227 314 K 314 (327)
T ss_pred c
Confidence 4
No 205
>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=8.2e-37 Score=329.11 Aligned_cols=261 Identities=28% Similarity=0.457 Sum_probs=220.3
Q ss_pred cccccceeEeeeeccCCcEEEEEEEEe-CCceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEeceeecCCceE
Q 003963 501 EILWEDLTIGEQIGQGSCGTVYHAVWY-GSQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLC 579 (783)
Q Consensus 501 e~~~~~y~i~~~LG~G~fG~Vy~a~~~-~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~ 579 (783)
.....+|++.++||.|+||.||++.+. .++.|+||.+...... ....+.+|+.+++.++||||+++++++.....+|
T Consensus 15 ~~~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~--~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~ 92 (296)
T cd06655 15 GDPKKKYTRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQKQP--KKELIINEILVMKELKNPNIVNFLDSFLVGDELF 92 (296)
T ss_pred CCCcceEEEEEEEecCCCeEEEEEEEcCCCcEEEEEEEecccCc--hHHHHHHHHHHHHhcCCCceeeeeeeEecCceEE
Confidence 334578999999999999999999875 4578999998754432 2356788999999999999999999999999999
Q ss_pred EEEEecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCcccccc
Q 003963 580 IVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHET 659 (783)
Q Consensus 580 lV~E~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~~~ 659 (783)
+||||+++++|..++... .+++..++.++.|++.||+|||+++ ++|+||||+||+++.++.++|+|||++......
T Consensus 93 lv~e~~~~~~L~~~~~~~--~l~~~~~~~i~~~l~~al~~LH~~~--i~H~dL~p~Nili~~~~~~kl~dfg~~~~~~~~ 168 (296)
T cd06655 93 VVMEYLAGGSLTDVVTET--CMDEAQIAAVCRECLQALEFLHANQ--VIHRDIKSDNVLLGMDGSVKLTDFGFCAQITPE 168 (296)
T ss_pred EEEEecCCCcHHHHHHhc--CCCHHHHHHHHHHHHHHHHHHHHCC--cccCCCCHHHEEECCCCCEEEccCccchhcccc
Confidence 999999999999998753 4899999999999999999999998 999999999999999999999999998755433
Q ss_pred cccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhcc-cccccCCCCCCHHHHHH
Q 003963 660 YLTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFM-NQRLEIPKDVDPRWAAI 738 (783)
Q Consensus 660 ~~~~~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~elltG~~Pf~~~~~~~~~~~i~~~-~~~~~~~~~~s~~l~~L 738 (783)
........+++.|+|||.+.+..++.++|||||||++|+|++|+.||...+.......+... ......+..+++.+.+|
T Consensus 169 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 248 (296)
T cd06655 169 QSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATNGTPELQNPEKLSPIFRDF 248 (296)
T ss_pred cccCCCcCCCccccCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCcccCCcccCCHHHHHH
Confidence 22233446889999999999988999999999999999999999999887765544333211 12334566789999999
Q ss_pred HHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhcCcC
Q 003963 739 VESCWHSDPQCRPSFQELVDKLRDLQRQYFQASRS 773 (783)
Q Consensus 739 I~~cL~~dP~~RPsa~ell~~L~~L~~~~f~~~~~ 773 (783)
|.+||..||.+||++.++ ++|+||+.-+.
T Consensus 249 i~~~l~~dp~~Rpt~~~i------l~~~~~~~~~~ 277 (296)
T cd06655 249 LNRCLEMDVEKRGSAKEL------LQHPFLKLAKP 277 (296)
T ss_pred HHHHhhcChhhCCCHHHH------hhChHhhhccc
Confidence 999999999999999999 78999976553
No 206
>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is
Probab=100.00 E-value=1.3e-37 Score=342.05 Aligned_cols=256 Identities=26% Similarity=0.350 Sum_probs=207.8
Q ss_pred cccceeEeeeeccCCcEEEEEEEEeC-CceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEeceeecC------
Q 003963 503 LWEDLTIGEQIGQGSCGTVYHAVWYG-SQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSP------ 575 (783)
Q Consensus 503 ~~~~y~i~~~LG~G~fG~Vy~a~~~~-~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~------ 575 (783)
..++|++.+.||.|+||.||+|.+.. ++.||||++............+.+|+.+++.++||||+++++++...
T Consensus 13 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 92 (343)
T cd07878 13 VPERYQNLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHMKHENVIGLLDVFTPATSIENF 92 (343)
T ss_pred hhhhhhhheecccCCCeEEEEEEECCCCCEEEEEEeCchhhhhHHHHHHHHHHHHHHhcCCCchhhhhhhhccccccccc
Confidence 34789999999999999999999754 46799999876544434456677899999999999999999987543
Q ss_pred CceEEEEEecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCcc
Q 003963 576 QRLCIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRL 655 (783)
Q Consensus 576 ~~~~lV~E~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~ 655 (783)
...|++|+++ +++|.+++.. ..+++..+..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||++..
T Consensus 93 ~~~~~~~~~~-~~~l~~~~~~--~~l~~~~~~~i~~qi~~aL~~LH~~~--ivHrdikp~Nil~~~~~~~kl~Dfg~~~~ 167 (343)
T cd07878 93 NEVYLVTNLM-GADLNNIVKC--QKLSDEHVQFLIYQLLRGLKYIHSAG--IIHRDLKPSNVAVNEDCELRILDFGLARQ 167 (343)
T ss_pred CcEEEEeecC-CCCHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCC--eecccCChhhEEECCCCCEEEcCCcccee
Confidence 3478999998 7799988864 35899999999999999999999998 99999999999999999999999999976
Q ss_pred cccccccccCCCCCCcccCcccccC-CCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhcccc-----------
Q 003963 656 KHETYLTTKTGKGTPQWMAPEVLRN-EPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQ----------- 723 (783)
Q Consensus 656 ~~~~~~~~~~~~Gt~~Y~aPE~~~~-~~~s~~sDIwSLG~il~elltG~~Pf~~~~~~~~~~~i~~~~~----------- 723 (783)
.... .....||+.|+|||++.+ ..++.++|||||||++|+|++|+.||...+....+..+.....
T Consensus 168 ~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (343)
T cd07878 168 ADDE---MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLKGKALFPGNDYIDQLKRIMEVVGTPSPEVLKKIS 244 (343)
T ss_pred cCCC---cCCccccccccCchHhcCCccCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhcc
Confidence 5432 234568999999999877 5688999999999999999999999987655443322211000
Q ss_pred ----------ccc--------CCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhcCc
Q 003963 724 ----------RLE--------IPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQASR 772 (783)
Q Consensus 724 ----------~~~--------~~~~~s~~l~~LI~~cL~~dP~~RPsa~ell~~L~~L~~~~f~~~~ 772 (783)
... .....++.+.+||.+||..||.+|||+.++ +.|+||....
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dp~~R~s~~el------l~hp~~~~~~ 305 (343)
T cd07878 245 SEHARKYIQSLPHMPQQDLKKIFRGANPLAIDLLEKMLVLDSDKRISASEA------LAHPYFSQYH 305 (343)
T ss_pred hhhHHHHhhccccccchhHHHhccCCCHHHHHHHHHHcCCChhhCCCHHHH------hcCcchhccC
Confidence 000 112356778999999999999999999999 6789997644
No 207
>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with
Probab=100.00 E-value=5.5e-37 Score=328.37 Aligned_cols=255 Identities=20% Similarity=0.297 Sum_probs=212.0
Q ss_pred eeEeeeeccCCcEEEEEEEEeC-CceEEEEEEecccCCH-HHHHHHHHHHHHHHhCCCCceeeEeceeecCCceEEEEEe
Q 003963 507 LTIGEQIGQGSCGTVYHAVWYG-SQDVAVKVFSRQEYSD-EVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIVTEF 584 (783)
Q Consensus 507 y~i~~~LG~G~fG~Vy~a~~~~-~~~vAiK~i~~~~~~~-~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lV~E~ 584 (783)
|+..+.||+|+||.||++.+.. ++.||+|++....... .....+.+|+.+++.++|+||+.+++++..++..|++|||
T Consensus 2 ~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~ 81 (285)
T cd05632 2 FRQYRVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKVNSQFVVNLAYAYETKDALCLVLTI 81 (285)
T ss_pred ceEEEEEecCCCeEEEEEEECCCCcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHcCCcCceeEEEEEecCCEEEEEEEe
Confidence 7788999999999999998864 5679999987654332 2344577899999999999999999999999999999999
Q ss_pred cCCCCHHHHHhhc-CCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCcccccccccc
Q 003963 585 LPRGSLFRLLQRN-TTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETYLTT 663 (783)
Q Consensus 585 ~~ggsL~~~L~~~-~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~~~~ 663 (783)
+++++|.+++... ...+++..+..++.|++.||.|||+.+ |+||||||+||+++.++.++|+|||++....... ..
T Consensus 82 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~--iiH~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~-~~ 158 (285)
T cd05632 82 MNGGDLKFHIYNMGNPGFEEERALFYAAEILCGLEDLHREN--TVYRDLKPENILLDDYGHIRISDLGLAVKIPEGE-SI 158 (285)
T ss_pred ccCccHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCC--eeecCCCHHHEEECCCCCEEEecCCcceecCCCC-cc
Confidence 9999999888643 346899999999999999999999998 9999999999999999999999999986543321 22
Q ss_pred cCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhc--ccccccCCCCCCHHHHHHHHH
Q 003963 664 KTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGF--MNQRLEIPKDVDPRWAAIVES 741 (783)
Q Consensus 664 ~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~elltG~~Pf~~~~~~~~~~~i~~--~~~~~~~~~~~s~~l~~LI~~ 741 (783)
....|+..|+|||++.+..++.++|+|||||++|+|++|..||...........+.. ......++..++..+.+|+..
T Consensus 159 ~~~~g~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ 238 (285)
T cd05632 159 RGRVGTVGYMAPEVLNNQRYTLSPDYWGLGCLIYEMIEGQSPFRGRKEKVKREEVDRRVLETEEVYSAKFSEEAKSICKM 238 (285)
T ss_pred cCCCCCcCccChHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhhccccccCccCCHHHHHHHHH
Confidence 345789999999999998899999999999999999999999987665433322211 222344566789999999999
Q ss_pred hhhhCCCCCCC-----HHHHHHHHHHHHHHHhhc
Q 003963 742 CWHSDPQCRPS-----FQELVDKLRDLQRQYFQA 770 (783)
Q Consensus 742 cL~~dP~~RPs-----a~ell~~L~~L~~~~f~~ 770 (783)
||+.||.+||+ +.++ +.|+||+.
T Consensus 239 ~l~~~P~~R~~~~~~~~~~l------~~~~~~~~ 266 (285)
T cd05632 239 LLTKDPKQRLGCQEEGAGEV------KRHPFFRN 266 (285)
T ss_pred HccCCHhHcCCCcccChHHH------HcChhhhc
Confidence 99999999999 6777 56777744
No 208
>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)
Probab=100.00 E-value=3.6e-37 Score=327.04 Aligned_cols=257 Identities=33% Similarity=0.534 Sum_probs=218.8
Q ss_pred cceeEeeeeccCCcEEEEEEEEeC-CceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEeceeecCCceEEEEE
Q 003963 505 EDLTIGEQIGQGSCGTVYHAVWYG-SQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIVTE 583 (783)
Q Consensus 505 ~~y~i~~~LG~G~fG~Vy~a~~~~-~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lV~E 583 (783)
++|++.+.||.|+||.||++.+.. ++.|++|++.... .......+.+|+.+++.++|+||+++++++..+..+|+|+|
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e 79 (274)
T cd06609 1 ELFTLLECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEE-AEDEIEDIQQEIQFLSQCRSPYITKYYGSFLKGSKLWIIME 79 (274)
T ss_pred ChhhhhhhhcCCCCeEEEEEEECCCCeEEEEEEeeccc-cchHHHHHHHHHHHHHHcCCCCeeeeeEEEEECCeEEEEEE
Confidence 468889999999999999999764 5679999987654 23344678899999999999999999999999999999999
Q ss_pred ecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCcccccccccc
Q 003963 584 FLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETYLTT 663 (783)
Q Consensus 584 ~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~~~~ 663 (783)
|+++++|.+++... ++++..++.++.|++.||.|||+.+ ++|+||+|+||+++.++.++|+|||++..........
T Consensus 80 ~~~~~~L~~~~~~~--~~~~~~~~~~~~ql~~~l~~lh~~~--i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~~~ 155 (274)
T cd06609 80 YCGGGSCLDLLKPG--KLDETYIAFILREVLLGLEYLHEEG--KIHRDIKAANILLSEEGDVKLADFGVSGQLTSTMSKR 155 (274)
T ss_pred eeCCCcHHHHHhhc--CCCHHHHHHHHHHHHHHHHHHHhCC--cccCCCCHHHEEECCCCCEEEcccccceeeccccccc
Confidence 99999999999764 6899999999999999999999988 9999999999999999999999999997765443333
Q ss_pred cCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhcccccccCCCC-CCHHHHHHHHHh
Q 003963 664 KTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLEIPKD-VDPRWAAIVESC 742 (783)
Q Consensus 664 ~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~-~s~~l~~LI~~c 742 (783)
....+++.|+|||.+.+..++.++|||||||++|+|++|..||...+.......+... ....++.. ++..+.++|.+|
T Consensus 156 ~~~~~~~~y~~PE~~~~~~~~~~sDv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~ 234 (274)
T cd06609 156 NTFVGTPFWMAPEVIKQSGYDEKADIWSLGITAIELAKGEPPLSDLHPMRVLFLIPKN-NPPSLEGNKFSKPFKDFVSLC 234 (274)
T ss_pred ccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCcccCchHHHHHHhhhc-CCCCCcccccCHHHHHHHHHH
Confidence 4556888999999999988999999999999999999999999877665554443322 22333334 789999999999
Q ss_pred hhhCCCCCCCHHHHHHHHHHHHHHHhhcCcC
Q 003963 743 WHSDPQCRPSFQELVDKLRDLQRQYFQASRS 773 (783)
Q Consensus 743 L~~dP~~RPsa~ell~~L~~L~~~~f~~~~~ 773 (783)
|..+|.+||++.++ ++|+||+....
T Consensus 235 l~~~p~~Rpt~~~i------l~~~~~~~~~~ 259 (274)
T cd06609 235 LNKDPKERPSAKEL------LKHKFIKKAKK 259 (274)
T ss_pred hhCChhhCcCHHHH------hhChhhcCCCc
Confidence 99999999999999 67899976543
No 209
>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]
Probab=100.00 E-value=9.2e-38 Score=312.66 Aligned_cols=257 Identities=26% Similarity=0.436 Sum_probs=210.3
Q ss_pred ccccceeEeeeeccCCcEEEEEEEEeCC-ceEEEEEEecccCCHHHHHHHHHHHHHHHhCC-CCceeeEeceeecCCceE
Q 003963 502 ILWEDLTIGEQIGQGSCGTVYHAVWYGS-QDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLR-HPNVLLFMGAVTSPQRLC 579 (783)
Q Consensus 502 ~~~~~y~i~~~LG~G~fG~Vy~a~~~~~-~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~-HpnIv~l~~~~~~~~~~~ 579 (783)
...++.+.+..||.|+.|.|+++..+.. .-.|||.+.+..- .+..+++...+.++...+ .|+||+.+|+|..+..++
T Consensus 89 ~dindl~~l~dlGsGtcG~V~k~~~rs~~~iiAVK~M~rt~N-kee~kRILmDldvv~~s~dcpyIV~c~GyFi~n~dV~ 167 (391)
T KOG0983|consen 89 ADINDLENLGDLGSGTCGQVWKMRFRSTGHIIAVKQMRRTGN-KEENKRILMDLDVVLKSHDCPYIVQCFGYFITNTDVF 167 (391)
T ss_pred cChHHhhhHHhhcCCCccceEEEEEcccceEEEEEeecccCC-HHHHHHHHHhhhHHhhccCCCeeeeeeeEEeeCchHH
Confidence 3455677888999999999999998764 5689999987653 444567777777666554 899999999999999999
Q ss_pred EEEEecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCcccccc
Q 003963 580 IVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHET 659 (783)
Q Consensus 580 lV~E~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~~~ 659 (783)
++||.| ..-+..+|.+-..++++..+-++...+++||.||.+++ +||||||||+|||+|..|.|||||||++-...+.
T Consensus 168 IcMelM-s~C~ekLlkrik~piPE~ilGk~tva~v~AL~YLKeKH-~viHRDvKPSNILlDe~GniKlCDFGIsGrlvdS 245 (391)
T KOG0983|consen 168 ICMELM-STCAEKLLKRIKGPIPERILGKMTVAIVKALYYLKEKH-GVIHRDVKPSNILLDERGNIKLCDFGISGRLVDS 245 (391)
T ss_pred HHHHHH-HHHHHHHHHHhcCCchHHhhhhhHHHHHHHHHHHHHhc-ceeecccCccceEEccCCCEEeecccccceeecc
Confidence 999999 45778888877788999999999999999999998653 4999999999999999999999999999877665
Q ss_pred cccccCCCCCCcccCcccccCC---CCCchhHHHHHHHHHHHHHcCCCCCCCCC-hHHHHHHhhcccccccCC--CCCCH
Q 003963 660 YLTTKTGKGTPQWMAPEVLRNE---PSDEKSDVYSFGVILWELATEKIPWDNLN-SMQVIGAVGFMNQRLEIP--KDVDP 733 (783)
Q Consensus 660 ~~~~~~~~Gt~~Y~aPE~~~~~---~~s~~sDIwSLG~il~elltG~~Pf~~~~-~~~~~~~i~~~~~~~~~~--~~~s~ 733 (783)
...+ ...|.+.|||||.+... .|+.++||||||++|+||.||..||.+.+ ..+++..+.. ...+.++ ...++
T Consensus 246 kAht-rsAGC~~YMaPERidp~~~~kYDiRaDVWSlGITlveLaTg~yPy~~c~tdFe~ltkvln-~ePP~L~~~~gFSp 323 (391)
T KOG0983|consen 246 KAHT-RSAGCAAYMAPERIDPPDKPKYDIRADVWSLGITLVELATGQYPYKGCKTDFEVLTKVLN-EEPPLLPGHMGFSP 323 (391)
T ss_pred cccc-cccCCccccCccccCCCCCCccchhhhhhhhccchhhhhcccCCCCCCCccHHHHHHHHh-cCCCCCCcccCcCH
Confidence 4433 45789999999998644 57889999999999999999999998754 3455544432 2223333 34899
Q ss_pred HHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhh
Q 003963 734 RWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQ 769 (783)
Q Consensus 734 ~l~~LI~~cL~~dP~~RPsa~ell~~L~~L~~~~f~ 769 (783)
.+.+|+..||++|+.+||.+.++ |+|+|+.
T Consensus 324 ~F~~fv~~CL~kd~r~RP~Y~~L------l~h~Fi~ 353 (391)
T KOG0983|consen 324 DFQSFVKDCLTKDHRKRPKYNKL------LEHPFIK 353 (391)
T ss_pred HHHHHHHHHhhcCcccCcchHHH------hcCccee
Confidence 99999999999999999999999 5566653
No 210
>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke
Probab=100.00 E-value=4.3e-37 Score=329.96 Aligned_cols=255 Identities=33% Similarity=0.554 Sum_probs=213.1
Q ss_pred ccceeEeeeeccCCcEEEEEEEEeCC-----------------ceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCcee
Q 003963 504 WEDLTIGEQIGQGSCGTVYHAVWYGS-----------------QDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVL 566 (783)
Q Consensus 504 ~~~y~i~~~LG~G~fG~Vy~a~~~~~-----------------~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv 566 (783)
.++|++.++||+|+||.||++.+... ..||+|++.... .......+.+|+++++.++||||+
T Consensus 4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~-~~~~~~~~~~e~~~l~~l~~~~i~ 82 (296)
T cd05051 4 RQPLNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDA-SDNAREDFLKEVKILSRLSDPNIA 82 (296)
T ss_pred hhhCcccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCcc-CHHHHHHHHHHHHHHHhcCCCCEe
Confidence 46899999999999999999986431 348999887543 335567889999999999999999
Q ss_pred eEeceeecCCceEEEEEecCCCCHHHHHhhcC----------CcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCC
Q 003963 567 LFMGAVTSPQRLCIVTEFLPRGSLFRLLQRNT----------TKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSN 636 (783)
Q Consensus 567 ~l~~~~~~~~~~~lV~E~~~ggsL~~~L~~~~----------~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~N 636 (783)
++++++..++..+++|||+++++|.+++.... ..+++..++.++.|++.||.|||+++ |+|+||||+|
T Consensus 83 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH~~~--i~H~dlkp~N 160 (296)
T cd05051 83 RLLGVCTVDPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLESLN--FVHRDLATRN 160 (296)
T ss_pred EEEEEEecCCCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHHHcC--ccccccchhc
Confidence 99999999999999999999999999997643 25899999999999999999999998 9999999999
Q ss_pred EEEcCCCcEEEEecCCCccccccc--ccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHc--CCCCCCCCChH
Q 003963 637 LLVDKHWTVKVGDFGLSRLKHETY--LTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELAT--EKIPWDNLNSM 712 (783)
Q Consensus 637 ILl~~~~~vkL~DFGla~~~~~~~--~~~~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~ellt--G~~Pf~~~~~~ 712 (783)
|+++.++.++|+|||++....... .......+++.|+|||.+.+..++.++|||||||++|+|++ +..||...+..
T Consensus 161 ili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p~~~~~~~ 240 (296)
T cd05051 161 CLVGKNYTIKIADFGMSRNLYSSDYYRVQGRAPLPIRWMAWESVLLGKFTTKSDVWAFGVTLWEILTLCREQPYEHLTDQ 240 (296)
T ss_pred eeecCCCceEEccccceeecccCcceeecCcCCCCceecCHHHhhcCCCCccchhhhhHHHHHHHHhcCCCCCCCCcChH
Confidence 999999999999999987543321 12223456788999999998889999999999999999998 78899887766
Q ss_pred HHHHHhhcc------cccccCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHH
Q 003963 713 QVIGAVGFM------NQRLEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLR 761 (783)
Q Consensus 713 ~~~~~i~~~------~~~~~~~~~~s~~l~~LI~~cL~~dP~~RPsa~ell~~L~ 761 (783)
..+..+... ......+..++.++.+||.+||+.||.+||++.+|++.|+
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rpt~~el~~~L~ 295 (296)
T cd05051 241 QVIENAGHFFRDDGRQIYLPRPPNCPKDIYELMLECWRRDEEDRPTFREIHLFLQ 295 (296)
T ss_pred HHHHHHHhccccccccccCCCccCCCHHHHHHHHHHhccChhcCCCHHHHHHHhc
Confidence 665554322 1112334567899999999999999999999999988774
No 211
>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate
Probab=100.00 E-value=4.7e-37 Score=324.39 Aligned_cols=253 Identities=30% Similarity=0.530 Sum_probs=213.2
Q ss_pred ceeEeeeeccCCcEEEEEEEEeC-CceEEEEEEecccCC-------HHHHHHHHHHHHHHHhCCCCceeeEeceeecCCc
Q 003963 506 DLTIGEQIGQGSCGTVYHAVWYG-SQDVAVKVFSRQEYS-------DEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQR 577 (783)
Q Consensus 506 ~y~i~~~LG~G~fG~Vy~a~~~~-~~~vAiK~i~~~~~~-------~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~ 577 (783)
+|.+.+.||.|+||.||+|.+.. ++.||+|.+...... ......+.+|+.+++.++||||+++++++...+.
T Consensus 1 ~~~~~~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~ 80 (267)
T cd06628 1 KWIKGALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHENIVQYLGSSLDADH 80 (267)
T ss_pred CccccceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCc
Confidence 47788999999999999998754 578999988654332 1344678899999999999999999999999999
Q ss_pred eEEEEEecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCcccc
Q 003963 578 LCIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKH 657 (783)
Q Consensus 578 ~~lV~E~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~ 657 (783)
.++||||+++++|.+++... ..+++..+..++.|++.||.|||+++ ++|+||||+||+++.++.++|+|||+++...
T Consensus 81 ~~lv~e~~~~~~L~~~l~~~-~~l~~~~~~~~~~~l~~~l~~lH~~~--ivH~di~p~nil~~~~~~~~l~dfg~~~~~~ 157 (267)
T cd06628 81 LNIFLEYVPGGSVAALLNNY-GAFEETLVRNFVRQILKGLNYLHNRG--IIHRDIKGANILVDNKGGIKISDFGISKKLE 157 (267)
T ss_pred cEEEEEecCCCCHHHHHHhc-cCccHHHHHHHHHHHHHHHHHHHhcC--cccccCCHHHEEEcCCCCEEecccCCCcccc
Confidence 99999999999999999764 45888999999999999999999998 9999999999999999999999999987654
Q ss_pred cccc------cccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhcccccccCCCCC
Q 003963 658 ETYL------TTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLEIPKDV 731 (783)
Q Consensus 658 ~~~~------~~~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~ 731 (783)
.... ......|+..|+|||.+.+..++.++|+|||||++|+|++|+.||...+.......+.. .....++..+
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~-~~~~~~~~~~ 236 (267)
T cd06628 158 ANSLSTKTNGARPSLQGSVFWMAPEVVKQTSYTRKADIWSLGCLVVEMLTGKHPFPDCTQLQAIFKIGE-NASPEIPSNI 236 (267)
T ss_pred cccccCCccccccccCCCcCccChhHhccCCCCchhhhHHHHHHHHHHhhCCCCCCCccHHHHHHHHhc-cCCCcCCccc
Confidence 2111 11223578899999999998899999999999999999999999988766554444322 2344567788
Q ss_pred CHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHh
Q 003963 732 DPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYF 768 (783)
Q Consensus 732 s~~l~~LI~~cL~~dP~~RPsa~ell~~L~~L~~~~f 768 (783)
+..+.++|.+||+.||.+||++.++ ++++||
T Consensus 237 ~~~~~~li~~~l~~~p~~Rp~~~~i------l~~~~~ 267 (267)
T cd06628 237 SSEAIDFLEKTFEIDHNKRPTAAEL------LKHPFL 267 (267)
T ss_pred CHHHHHHHHHHccCCchhCcCHHHH------hhCCCC
Confidence 9999999999999999999999999 556665
No 212
>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase. Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well
Probab=100.00 E-value=1.1e-36 Score=324.32 Aligned_cols=256 Identities=27% Similarity=0.517 Sum_probs=212.9
Q ss_pred ccccceeEeeeeccCCcEEEEEEEEeC------CceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEeceeecC
Q 003963 502 ILWEDLTIGEQIGQGSCGTVYHAVWYG------SQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSP 575 (783)
Q Consensus 502 ~~~~~y~i~~~LG~G~fG~Vy~a~~~~------~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~ 575 (783)
+..++|.+.+.||+|+||.||+|.+.. ...|++|.+.... .......+.+|+.+++.++|+||+++++++...
T Consensus 3 ~~~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~-~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~ 81 (277)
T cd05036 3 VPRDSITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESC-SEQDESDFLMEALIMSKFNHQNIVRLIGVSFER 81 (277)
T ss_pred CCHHHcEeeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCC-CHHHHHHHHHHHHHHHhCCCCCEeeEEEEEccC
Confidence 345789999999999999999999864 3468899875443 233345688899999999999999999999998
Q ss_pred CceEEEEEecCCCCHHHHHhhcC------CcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCC---cEE
Q 003963 576 QRLCIVTEFLPRGSLFRLLQRNT------TKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHW---TVK 646 (783)
Q Consensus 576 ~~~~lV~E~~~ggsL~~~L~~~~------~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~---~vk 646 (783)
...++||||+++++|.+++.... ..+++..++.++.||+.||+|||+++ ++|+||||+|||++.++ .+|
T Consensus 82 ~~~~lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~--ivH~dlkp~nil~~~~~~~~~~k 159 (277)
T cd05036 82 LPRFILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLEENH--FIHRDIAARNCLLTCKGPGRVAK 159 (277)
T ss_pred CCcEEEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC--EeecccchheEEEeccCCCcceE
Confidence 99999999999999999997543 24889999999999999999999998 99999999999998654 599
Q ss_pred EEecCCCcccccccc--cccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCChHHHHHHhhcccc
Q 003963 647 VGDFGLSRLKHETYL--TTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELAT-EKIPWDNLNSMQVIGAVGFMNQ 723 (783)
Q Consensus 647 L~DFGla~~~~~~~~--~~~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~ellt-G~~Pf~~~~~~~~~~~i~~~~~ 723 (783)
|+|||+++....... .......+..|+|||++.+..++.++|||||||++|+|++ |..||......+....+. ...
T Consensus 160 l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~~g~~pf~~~~~~~~~~~~~-~~~ 238 (277)
T cd05036 160 IADFGMARDIYRASYYRKGGRAMLPIKWMPPEAFLDGIFTSKTDVWSFGVLLWEIFSLGYMPYPGRTNQEVMEFVT-GGG 238 (277)
T ss_pred eccCccccccCCccceecCCCCCccHhhCCHHHHhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHH-cCC
Confidence 999999876532211 1112233568999999999999999999999999999997 999998877766555443 233
Q ss_pred cccCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHH
Q 003963 724 RLEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLR 761 (783)
Q Consensus 724 ~~~~~~~~s~~l~~LI~~cL~~dP~~RPsa~ell~~L~ 761 (783)
....+..++..+.+|+.+||+.+|.+||++.+++++|.
T Consensus 239 ~~~~~~~~~~~~~~~i~~cl~~~p~~Rps~~~vl~~l~ 276 (277)
T cd05036 239 RLDPPKGCPGPVYRIMTDCWQHTPEDRPNFATILERIQ 276 (277)
T ss_pred cCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHhh
Confidence 45567788999999999999999999999999998874
No 213
>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase). Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It
Probab=100.00 E-value=1.1e-36 Score=324.44 Aligned_cols=260 Identities=29% Similarity=0.487 Sum_probs=217.7
Q ss_pred cccceeEeeeeccCCcEEEEEEEEeC-----CceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEeceeec-CC
Q 003963 503 LWEDLTIGEQIGQGSCGTVYHAVWYG-----SQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTS-PQ 576 (783)
Q Consensus 503 ~~~~y~i~~~LG~G~fG~Vy~a~~~~-----~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~-~~ 576 (783)
..++|++.+.||+|+||.||+|.+.. ...|++|++... ........+.+|+.+++.++||||+++++++.. +.
T Consensus 4 ~~~~~~~~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~-~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~ 82 (280)
T cd05043 4 SRDRVTLSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDH-ASEIQVTLLLQESCLLYGLSHQNILPILHVCIEDGE 82 (280)
T ss_pred chhheEEeeeecccCCceEEEEEEecCCCCceeEEEEEEccCC-CCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCC
Confidence 45789999999999999999999876 567999987643 345556778899999999999999999998765 56
Q ss_pred ceEEEEEecCCCCHHHHHhhcC-------CcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEe
Q 003963 577 RLCIVTEFLPRGSLFRLLQRNT-------TKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGD 649 (783)
Q Consensus 577 ~~~lV~E~~~ggsL~~~L~~~~-------~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~D 649 (783)
..+++++|+++++|.+++.... ..+++..++.++.||+.||+|||+++ ++|+||||+||+++.++.+||+|
T Consensus 83 ~~~~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~--i~H~di~p~nil~~~~~~~kl~d 160 (280)
T cd05043 83 PPFVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLHKRG--VIHKDIAARNCVIDEELQVKITD 160 (280)
T ss_pred CCEEEEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHHCC--EeecccCHhhEEEcCCCcEEECC
Confidence 7899999999999999996532 45889999999999999999999998 99999999999999999999999
Q ss_pred cCCCcccccccc--cccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCChHHHHHHhhccccccc
Q 003963 650 FGLSRLKHETYL--TTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELAT-EKIPWDNLNSMQVIGAVGFMNQRLE 726 (783)
Q Consensus 650 FGla~~~~~~~~--~~~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~~ 726 (783)
||+++....... ......++..|+|||++.+..++.++|||||||++|++++ |++||...+.......+.. .....
T Consensus 161 ~g~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~-~~~~~ 239 (280)
T cd05043 161 NALSRDLFPMDYHCLGDNENRPVKWMALESLVNKEYSSASDVWSFGVLLWELMTLGQTPYVEIDPFEMAAYLKD-GYRLA 239 (280)
T ss_pred CCCcccccCCceEEeCCCCCcchhccCHHHHhcCCCCchhhHHHhHHHHHHHhcCCCCCcCcCCHHHHHHHHHc-CCCCC
Confidence 999975432211 1122345678999999999889999999999999999999 9999988777665544432 22334
Q ss_pred CCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHH
Q 003963 727 IPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQ 766 (783)
Q Consensus 727 ~~~~~s~~l~~LI~~cL~~dP~~RPsa~ell~~L~~L~~~ 766 (783)
.+..+++++.+++.+||..+|++||++.++++.|.++...
T Consensus 240 ~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~~~~~~ 279 (280)
T cd05043 240 QPINCPDELFAVMACCWALDPEERPSFSQLVQCLTDFHAQ 279 (280)
T ss_pred CCCcCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHhc
Confidence 4566789999999999999999999999999999988653
No 214
>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi
Probab=100.00 E-value=9.1e-37 Score=320.81 Aligned_cols=247 Identities=30% Similarity=0.547 Sum_probs=208.5
Q ss_pred eeeccCCcEEEEEEEEeCC----ceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEeceeecCCceEEEEEecC
Q 003963 511 EQIGQGSCGTVYHAVWYGS----QDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIVTEFLP 586 (783)
Q Consensus 511 ~~LG~G~fG~Vy~a~~~~~----~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lV~E~~~ 586 (783)
++||+|+||.||+|.+... ..||+|.+...... .....+.+|+.+++.+.|||||++++++. ....++||||++
T Consensus 1 ~~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~-~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~~v~e~~~ 78 (257)
T cd05060 1 KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIA-AGKKEFLREASVMAQLDHPCIVRLIGVCK-GEPLMLVMELAP 78 (257)
T ss_pred CccCccCceeEEEeEeeccCCCcceEEEEecccccch-HHHHHHHHHHHHHHhcCCCCeeeEEEEEc-CCceEEEEEeCC
Confidence 4699999999999986432 47999998766543 44567889999999999999999999876 456899999999
Q ss_pred CCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCccccccccc---c
Q 003963 587 RGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETYLT---T 663 (783)
Q Consensus 587 ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~~~---~ 663 (783)
+++|.+++.... .+++..++.++.|++.||.|||..+ ++|+||||+|||++.++.+||+|||+++........ .
T Consensus 79 ~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lh~~~--i~H~di~p~nili~~~~~~kl~df~~~~~~~~~~~~~~~~ 155 (257)
T cd05060 79 LGPLLKYLKKRR-EIPVSDLKELAHQVAMGMAYLESKH--FVHRDLAARNVLLVNRHQAKISDFGMSRALGAGSDYYRAT 155 (257)
T ss_pred CCcHHHHHHhCC-CCCHHHHHHHHHHHHHHHHHHhhcC--eeccCcccceEEEcCCCcEEeccccccceeecCCcccccc
Confidence 999999997654 6899999999999999999999998 999999999999999999999999998765432211 1
Q ss_pred cCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCChHHHHHHhhcccccccCCCCCCHHHHHHHHHh
Q 003963 664 KTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELAT-EKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAAIVESC 742 (783)
Q Consensus 664 ~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~l~~LI~~c 742 (783)
....++..|+|||.+.+..++.++|||||||++|+|++ |.+||...+..+....+.. ......+..++..+.++|.+|
T Consensus 156 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~~~~~g~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~li~~c 234 (257)
T cd05060 156 TAGRWPLKWYAPECINYGKFSSKSDVWSYGVTLWEAFSYGAKPYGEMKGAEVIAMLES-GERLPRPEECPQEIYSIMLSC 234 (257)
T ss_pred cCccccccccCHHHhcCCCCCccchHHHHHHHHHHHHcCCCCCcccCCHHHHHHHHHc-CCcCCCCCCCCHHHHHHHHHH
Confidence 12223567999999999999999999999999999998 9999988877666555532 334456778899999999999
Q ss_pred hhhCCCCCCCHHHHHHHHHHH
Q 003963 743 WHSDPQCRPSFQELVDKLRDL 763 (783)
Q Consensus 743 L~~dP~~RPsa~ell~~L~~L 763 (783)
|..+|.+||++.++++.|+++
T Consensus 235 l~~~p~~Rp~~~~l~~~l~~~ 255 (257)
T cd05060 235 WKYRPEDRPTFSELESTFRRD 255 (257)
T ss_pred hcCChhhCcCHHHHHHHHHhc
Confidence 999999999999999998765
No 215
>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer. Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c
Probab=100.00 E-value=1e-36 Score=318.55 Aligned_cols=247 Identities=30% Similarity=0.568 Sum_probs=210.2
Q ss_pred eeeccCCcEEEEEEEEeCCceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEeceeecCCceEEEEEecCCCCH
Q 003963 511 EQIGQGSCGTVYHAVWYGSQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIVTEFLPRGSL 590 (783)
Q Consensus 511 ~~LG~G~fG~Vy~a~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lV~E~~~ggsL 590 (783)
++||+|+||.||++....++.||+|++.... .......+.+|+.+++.++||||+++++++...+..++||||+++++|
T Consensus 1 ~~ig~g~~g~vy~~~~~~~~~~a~K~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 79 (250)
T cd05085 1 ELLGKGNFGEVFKGTLKDKTPVAVKTCKEDL-PQELKIKFLSEARILKQYDHPNIVKLIGVCTQRQPIYIVMELVPGGDF 79 (250)
T ss_pred CccCCCCCceEEEEEecCCcEEEEEecCCcC-CHHHHHHHHHHHHHHHhCCCCCcCeEEEEEecCCccEEEEECCCCCcH
Confidence 3689999999999997777889999886543 344455788999999999999999999999999999999999999999
Q ss_pred HHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCcccccccccc-cCCCCC
Q 003963 591 FRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETYLTT-KTGKGT 669 (783)
Q Consensus 591 ~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~~~~-~~~~Gt 669 (783)
.+++......+++..++.++.|++.+|.|||+++ ++|+||||+||+++.++.++|+|||++.......... ....++
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~--~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~ 157 (250)
T cd05085 80 LSFLRKKKDELKTKQLVKFALDAAAGMAYLESKN--CIHRDLAARNCLVGENNVLKISDFGMSRQEDDGIYSSSGLKQIP 157 (250)
T ss_pred HHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCC--eeecccChheEEEcCCCeEEECCCccceeccccccccCCCCCCc
Confidence 9999766666889999999999999999999998 9999999999999999999999999987543322111 122346
Q ss_pred CcccCcccccCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCChHHHHHHhhcccccccCCCCCCHHHHHHHHHhhhhCCC
Q 003963 670 PQWMAPEVLRNEPSDEKSDVYSFGVILWELAT-EKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAAIVESCWHSDPQ 748 (783)
Q Consensus 670 ~~Y~aPE~~~~~~~s~~sDIwSLG~il~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~l~~LI~~cL~~dP~ 748 (783)
..|+|||++.+..++.++|||||||++|+|++ |..||...........+. .......+..++..+.+|+.+||..+|.
T Consensus 158 ~~y~aPE~~~~~~~~~~~Di~slG~ll~~~~~~g~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~li~~~l~~~p~ 236 (250)
T cd05085 158 IKWTAPEALNYGRYSSESDVWSYGILLWETFSLGVCPYPGMTNQQAREQVE-KGYRMSCPQKCPDDVYKVMQRCWDYKPE 236 (250)
T ss_pred ccccCHHHhccCCCCchhHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHH-cCCCCCCCCCCCHHHHHHHHHHcccCcc
Confidence 67999999998889999999999999999998 999998877666555543 2334456677899999999999999999
Q ss_pred CCCCHHHHHHHHH
Q 003963 749 CRPSFQELVDKLR 761 (783)
Q Consensus 749 ~RPsa~ell~~L~ 761 (783)
+||++.++++.|.
T Consensus 237 ~Rp~~~~l~~~l~ 249 (250)
T cd05085 237 NRPKFSELQKELA 249 (250)
T ss_pred cCCCHHHHHHHhc
Confidence 9999999988764
No 216
>PHA03209 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=5e-37 Score=339.89 Aligned_cols=249 Identities=24% Similarity=0.368 Sum_probs=199.5
Q ss_pred ccceeEeeeeccCCcEEEEEEEEeCC-ceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEeceeecCCceEEEE
Q 003963 504 WEDLTIGEQIGQGSCGTVYHAVWYGS-QDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIVT 582 (783)
Q Consensus 504 ~~~y~i~~~LG~G~fG~Vy~a~~~~~-~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lV~ 582 (783)
..+|++.+.||+|+||.||+|.+... +.||+|+..... ...|+.+++.++||||+++++++......++||
T Consensus 65 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~valK~~~~~~--------~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 136 (357)
T PHA03209 65 SLGYTVIKTLTPGSEGRVFVATKPGQPDPVVLKIGQKGT--------TLIEAMLLQNVNHPSVIRMKDTLVSGAITCMVL 136 (357)
T ss_pred hcCcEEEEEecCCCCeEEEEEEECCCCceEEEEeCCccc--------cHHHHHHHHhCCCCCCcChhheEEeCCeeEEEE
Confidence 35799999999999999999998654 579999754322 245899999999999999999999999999999
Q ss_pred EecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCccccccccc
Q 003963 583 EFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETYLT 662 (783)
Q Consensus 583 E~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~~~ 662 (783)
||+. ++|.+++......+++..++.++.||+.||.|||+++ ||||||||+|||++.++.+||+|||++....... .
T Consensus 137 e~~~-~~l~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~--ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~-~ 212 (357)
T PHA03209 137 PHYS-SDLYTYLTKRSRPLPIDQALIIEKQILEGLRYLHAQR--IIHRDVKTENIFINDVDQVCIGDLGAAQFPVVAP-A 212 (357)
T ss_pred EccC-CcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCC--eecCCCCHHHEEECCCCCEEEecCccccccccCc-c
Confidence 9994 6899998776677999999999999999999999998 9999999999999999999999999987533221 2
Q ss_pred ccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCC-CCCCChH----------HHHHHhhcccc-cccC---
Q 003963 663 TKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIP-WDNLNSM----------QVIGAVGFMNQ-RLEI--- 727 (783)
Q Consensus 663 ~~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~elltG~~P-f~~~~~~----------~~~~~i~~~~~-~~~~--- 727 (783)
.....||+.|+|||++.+..++.++|||||||++|||+++..| |...... .....+..... ...+
T Consensus 213 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvvl~ell~~~~~~f~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 292 (357)
T PHA03209 213 FLGLAGTVETNAPEVLARDKYNSKADIWSAGIVLFEMLAYPSTIFEDPPSTPEEYVKSCHSHLLKIISTLKVHPEEFPRD 292 (357)
T ss_pred cccccccccccCCeecCCCCCCchhhHHHHHHHHHHHHHcCCccccCCCCcHHHHHHHHHHHHHHHHHHhccChhhcCCC
Confidence 2345689999999999999999999999999999999985444 4432111 01111100000 0000
Q ss_pred ---------------------------CCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhc
Q 003963 728 ---------------------------PKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQA 770 (783)
Q Consensus 728 ---------------------------~~~~s~~l~~LI~~cL~~dP~~RPsa~ell~~L~~L~~~~f~~ 770 (783)
...++.++.+||.+||+.||.+|||+.++ |.|+||+.
T Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rpta~e~------l~hp~f~~ 356 (357)
T PHA03209 293 PGSRLVRGFIEYASLERQPYTRYPCFQRVNLPIDGEFLVHKMLTFDAAMRPSAEEI------LNYPMFAQ 356 (357)
T ss_pred CccHHHHHHHhhcccCCCcccccHHHhccCCCchHHHHHHHHHcCCcccCcCHHHH------hcCchhcc
Confidence 01356677889999999999999999999 78999985
No 217
>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development
Probab=100.00 E-value=5.7e-37 Score=324.27 Aligned_cols=255 Identities=30% Similarity=0.504 Sum_probs=213.0
Q ss_pred cceeEeeeeccCCcEEEEEEEEeC-CceEEEEEEecccCC---HHHHHHHHHHHHHHHhCCCCceeeEeceeec--CCce
Q 003963 505 EDLTIGEQIGQGSCGTVYHAVWYG-SQDVAVKVFSRQEYS---DEVIHSFRQEVSLMKRLRHPNVLLFMGAVTS--PQRL 578 (783)
Q Consensus 505 ~~y~i~~~LG~G~fG~Vy~a~~~~-~~~vAiK~i~~~~~~---~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~--~~~~ 578 (783)
.+|++.+.||+|+||.||++.+.. +..|++|++...... ......+.+|+.+++.++||||+++++++.. ...+
T Consensus 2 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (266)
T cd06651 2 INWRRGKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERIVQYYGCLRDRAEKTL 81 (266)
T ss_pred CCccccceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcCCCCeeeEEEEEEcCCCCEE
Confidence 368899999999999999998754 578999998654322 2445678899999999999999999998865 3568
Q ss_pred EEEEEecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCccccc
Q 003963 579 CIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHE 658 (783)
Q Consensus 579 ~lV~E~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~~ 658 (783)
+++|||+++++|.+++.... .+++...+.++.|++.||+|||+++ |+|+||||+||+++.++.++|+|||++.....
T Consensus 82 ~l~~e~~~~~~L~~~l~~~~-~l~~~~~~~~~~qi~~~l~~LH~~~--i~H~~l~p~nil~~~~~~~~l~dfg~~~~~~~ 158 (266)
T cd06651 82 TIFMEYMPGGSVKDQLKAYG-ALTESVTRKYTRQILEGMSYLHSNM--IVHRDIKGANILRDSAGNVKLGDFGASKRLQT 158 (266)
T ss_pred EEEEeCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHhCC--eeeCCCCHHHEEECCCCCEEEccCCCcccccc
Confidence 89999999999999997643 5888999999999999999999988 99999999999999999999999999875432
Q ss_pred cc---ccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhcccccccCCCCCCHHH
Q 003963 659 TY---LTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRW 735 (783)
Q Consensus 659 ~~---~~~~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~l 735 (783)
.. .......++..|+|||.+.+..++.++|||||||++|+|++|..||..................+.++..+++.+
T Consensus 159 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (266)
T cd06651 159 ICMSGTGIRSVTGTPYWMSPEVISGEGYGRKADVWSLGCTVVEMLTEKPPWAEYEAMAAIFKIATQPTNPQLPSHISEHA 238 (266)
T ss_pred ccccCCccccCCccccccCHHHhCCCCCCchhhhHHHHHHHHHHHHCCCCccccchHHHHHHHhcCCCCCCCchhcCHHH
Confidence 11 111234578899999999998899999999999999999999999987766555544433334556677788999
Q ss_pred HHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhh
Q 003963 736 AAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQ 769 (783)
Q Consensus 736 ~~LI~~cL~~dP~~RPsa~ell~~L~~L~~~~f~ 769 (783)
++|| .||..+|.+||++.++ +.|+||+
T Consensus 239 ~~li-~~~~~~p~~Rp~~~ei------l~hp~~~ 265 (266)
T cd06651 239 RDFL-GCIFVEARHRPSAEEL------LRHPFAQ 265 (266)
T ss_pred HHHH-HHhcCChhhCcCHHHH------hcCcccc
Confidence 9999 6888999999999999 7889886
No 218
>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio
Probab=100.00 E-value=3.8e-37 Score=328.16 Aligned_cols=255 Identities=25% Similarity=0.355 Sum_probs=208.5
Q ss_pred cceeEeeeeccCCcEEEEEEEEeC-CceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEeceeecCCceEEEEE
Q 003963 505 EDLTIGEQIGQGSCGTVYHAVWYG-SQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIVTE 583 (783)
Q Consensus 505 ~~y~i~~~LG~G~fG~Vy~a~~~~-~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lV~E 583 (783)
++|++.+.||+|+||.||++.+.. ++.||+|++..........+.+.+|+.+++.++||||+++++++.....+++|||
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~e 80 (286)
T cd07847 1 EKYEKLSKIGEGSYGVVFKCRNRETGQIVAIKKFVESEDDPVIKKIALREIRMLKQLKHPNLVNLIEVFRRKRKLHLVFE 80 (286)
T ss_pred CceeeeeeecccCCeEEEEEEECCCCcEEEEEEEeecccCccccHHHHHHHHHHHhCCCCCEeeeeeEEeeCCEEEEEEe
Confidence 479999999999999999999864 5789999987554333334567889999999999999999999999999999999
Q ss_pred ecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCcccccccccc
Q 003963 584 FLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETYLTT 663 (783)
Q Consensus 584 ~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~~~~ 663 (783)
|++++.|..++.. ...+++..++.++.||+.||.|||+++ |+|+||||+||+++.++.++|+|||++..........
T Consensus 81 ~~~~~~l~~~~~~-~~~~~~~~~~~~~~ql~~~l~~LH~~~--i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~ 157 (286)
T cd07847 81 YCDHTVLNELEKN-PRGVPEHLIKKIIWQTLQAVNFCHKHN--CIHRDVKPENILITKQGQIKLCDFGFARILTGPGDDY 157 (286)
T ss_pred ccCccHHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHHCC--ceecCCChhhEEEcCCCcEEECccccceecCCCcccc
Confidence 9998888777654 346899999999999999999999998 9999999999999999999999999998665443223
Q ss_pred cCCCCCCcccCcccccC-CCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhcccc-----------------cc
Q 003963 664 KTGKGTPQWMAPEVLRN-EPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQ-----------------RL 725 (783)
Q Consensus 664 ~~~~Gt~~Y~aPE~~~~-~~~s~~sDIwSLG~il~elltG~~Pf~~~~~~~~~~~i~~~~~-----------------~~ 725 (783)
....++..|+|||++.+ ..++.++|||||||++|+|++|.+||...+..+....+..... ..
T Consensus 158 ~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (286)
T cd07847 158 TDYVATRWYRAPELLVGDTQYGPPVDVWAIGCVFAELLTGQPLWPGKSDVDQLYLIRKTLGDLIPRHQQIFSTNQFFKGL 237 (286)
T ss_pred cCcccccccCCHHHHhCCCCcCchhhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChHHhhhcccccccccc
Confidence 34457889999999876 4578999999999999999999999987765544333211000 00
Q ss_pred c------------CCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHh
Q 003963 726 E------------IPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYF 768 (783)
Q Consensus 726 ~------------~~~~~s~~l~~LI~~cL~~dP~~RPsa~ell~~L~~L~~~~f 768 (783)
. ....++..+.+||.+||..+|++||++.++ +.|+||
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~ei------l~~~~f 286 (286)
T cd07847 238 SIPEPETREPLESKFPNISSPALSFLKGCLQMDPTERLSCEEL------LEHPYF 286 (286)
T ss_pred cCCCcccccCHHHHhccCCHHHHHHHHHHhcCCccccCCHHHH------hcCCCC
Confidence 0 012467889999999999999999999999 667776
No 219
>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including
Probab=100.00 E-value=5.2e-37 Score=329.93 Aligned_cols=257 Identities=31% Similarity=0.516 Sum_probs=211.0
Q ss_pred ccccceeEeeeeccCCcEEEEEEEEeCC---------------ceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCcee
Q 003963 502 ILWEDLTIGEQIGQGSCGTVYHAVWYGS---------------QDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVL 566 (783)
Q Consensus 502 ~~~~~y~i~~~LG~G~fG~Vy~a~~~~~---------------~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv 566 (783)
+...+|++.++||+|+||.||++.+... ..||+|++.... .......+.+|+++++.++||||+
T Consensus 2 ~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~ei~~l~~l~h~~i~ 80 (295)
T cd05097 2 FPRQQLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADV-TKTARNDFLKEIKIMSRLKNPNII 80 (295)
T ss_pred CchHhCeehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCC-CHHHHHHHHHHHHHHHhCCCCCcC
Confidence 3456899999999999999999986432 248999987543 344556788999999999999999
Q ss_pred eEeceeecCCceEEEEEecCCCCHHHHHhhcC-----------CcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCC
Q 003963 567 LFMGAVTSPQRLCIVTEFLPRGSLFRLLQRNT-----------TKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSS 635 (783)
Q Consensus 567 ~l~~~~~~~~~~~lV~E~~~ggsL~~~L~~~~-----------~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~ 635 (783)
++++++......++||||+++++|.+++.... ..+++..++.++.|++.||+|||+++ ++|+||||+
T Consensus 81 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~--i~H~dlkp~ 158 (295)
T cd05097 81 RLLGVCVSDDPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLASLN--FVHRDLATR 158 (295)
T ss_pred eEEEEEcCCCccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHHhcC--eeccccChh
Confidence 99999999999999999999999999986432 13678889999999999999999998 999999999
Q ss_pred CEEEcCCCcEEEEecCCCcccccccc--cccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHc--CCCCCCCCCh
Q 003963 636 NLLVDKHWTVKVGDFGLSRLKHETYL--TTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELAT--EKIPWDNLNS 711 (783)
Q Consensus 636 NILl~~~~~vkL~DFGla~~~~~~~~--~~~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~ellt--G~~Pf~~~~~ 711 (783)
|||++.++.+||+|||++........ ......++..|+|||++.+..++.++|||||||++|+|++ +..||.....
T Consensus 159 Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~~l~el~~~~~~~p~~~~~~ 238 (295)
T cd05097 159 NCLVGNHYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEMFTLCKEQPYSLLSD 238 (295)
T ss_pred hEEEcCCCcEEecccccccccccCcceeccCcCcCceeecChhhhccCCcCchhhHHHHHHHHHHHHHcCCCCCCcccCh
Confidence 99999999999999999875433211 1122345678999999998889999999999999999988 7789988776
Q ss_pred HHHHHHhhcc------cccccCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHH
Q 003963 712 MQVIGAVGFM------NQRLEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLR 761 (783)
Q Consensus 712 ~~~~~~i~~~------~~~~~~~~~~s~~l~~LI~~cL~~dP~~RPsa~ell~~L~ 761 (783)
.+....+... ......+..+++.+.+||.+||..+|.+||++.++++.|+
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~RPs~~~i~~~l~ 294 (295)
T cd05097 239 EQVIENTGEFFRNQGRQIYLSQTPLCPSPVFKLMMRCWSRDIKDRPTFNKIHHFLR 294 (295)
T ss_pred HHHHHHHHHhhhhccccccCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHh
Confidence 6655443211 1123345567899999999999999999999999988775
No 220
>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ
Probab=100.00 E-value=6.2e-37 Score=322.04 Aligned_cols=251 Identities=31% Similarity=0.494 Sum_probs=212.7
Q ss_pred ccceeEeeeeccCCcEEEEEEEEeC-CceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEeceeecCCceEEEE
Q 003963 504 WEDLTIGEQIGQGSCGTVYHAVWYG-SQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIVT 582 (783)
Q Consensus 504 ~~~y~i~~~LG~G~fG~Vy~a~~~~-~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lV~ 582 (783)
.++|++.++||.|+||.||+|.+.. ++.+++|++...... ....+.+|+.+++.++||||+++++++.....+|++|
T Consensus 2 ~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~--~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~l~~ 79 (262)
T cd06613 2 QEDYELIQRIGSGTYGDVYKARDIATGELVAIKVIKLEPGD--DFEIIQQEISMLKECRHPNIVAYFGSYLRRDKLWIVM 79 (262)
T ss_pred ccceEEEEEecCCCceEEEEeEecCCCCEEEEEEEEcCchh--hHHHHHHHHHHHHhCCCCChhceEEEEEeCCEEEEEE
Confidence 3689999999999999999999754 567999998765432 4578889999999999999999999999999999999
Q ss_pred EecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCccccccccc
Q 003963 583 EFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETYLT 662 (783)
Q Consensus 583 E~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~~~ 662 (783)
||+++++|.+++......+++..++.++.|++.||.|||+++ |+|+||||+||+++.++.++|+|||++.........
T Consensus 80 e~~~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~--i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~~ 157 (262)
T cd06613 80 EYCGGGSLQDIYQVTRGPLSELQIAYVCRETLKGLAYLHETG--KIHRDIKGANILLTEDGDVKLADFGVSAQLTATIAK 157 (262)
T ss_pred eCCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHhCC--ceecCCChhhEEECCCCCEEECccccchhhhhhhhc
Confidence 999999999999876567999999999999999999999998 999999999999999999999999998765543323
Q ss_pred ccCCCCCCcccCcccccCC---CCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhcccc---cccCCCCCCHHHH
Q 003963 663 TKTGKGTPQWMAPEVLRNE---PSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQ---RLEIPKDVDPRWA 736 (783)
Q Consensus 663 ~~~~~Gt~~Y~aPE~~~~~---~~s~~sDIwSLG~il~elltG~~Pf~~~~~~~~~~~i~~~~~---~~~~~~~~s~~l~ 736 (783)
.....++..|++||.+.+. .++.++|+|||||++|+|++|.+||......+....+..... ....+..++.++.
T Consensus 158 ~~~~~~~~~y~~Pe~~~~~~~~~~~~~~Di~slG~~l~~~~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (262)
T cd06613 158 RKSFIGTPYWMAPEVAAVERKGGYDGKCDIWALGITAIELAELQPPMFDLHPMRALFLISKSNFPPPKLKDKEKWSPVFH 237 (262)
T ss_pred cccccCCccccCchhhcccccCCcCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCCCccccchhhhhHHHH
Confidence 3345688899999999877 788999999999999999999999988776554444322211 1122344678899
Q ss_pred HHHHHhhhhCCCCCCCHHHHHH
Q 003963 737 AIVESCWHSDPQCRPSFQELVD 758 (783)
Q Consensus 737 ~LI~~cL~~dP~~RPsa~ell~ 758 (783)
+||.+||..+|..||++.+++.
T Consensus 238 ~li~~~l~~~p~~Rpt~~~il~ 259 (262)
T cd06613 238 DFIKKCLTKDPKKRPTATKLLQ 259 (262)
T ss_pred HHHHHHcCCChhhCCCHHHHhc
Confidence 9999999999999999999954
No 221
>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase. Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and
Probab=100.00 E-value=5.5e-37 Score=321.99 Aligned_cols=247 Identities=33% Similarity=0.575 Sum_probs=212.6
Q ss_pred eeeccCCcEEEEEEEEeC-C---ceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEeceeecCCceEEEEEecC
Q 003963 511 EQIGQGSCGTVYHAVWYG-S---QDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIVTEFLP 586 (783)
Q Consensus 511 ~~LG~G~fG~Vy~a~~~~-~---~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lV~E~~~ 586 (783)
++||+|+||.||+|.+.. + ..||||++...... ...+.+.+|+.+++.++||||+++++++.. ..+++||||++
T Consensus 1 ~~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~~~~~v~e~~~ 78 (257)
T cd05040 1 KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLS-DIMDDFLKEAAIMHSLDHENLIRLYGVVLT-HPLMMVTELAP 78 (257)
T ss_pred CcCCccCcccEEeeeEecCCCCceEEEEeecCCcccH-HHHHHHHHHHHHHhhcCCCCccceeEEEcC-CeEEEEEEecC
Confidence 468999999999998754 2 25899998776654 566789999999999999999999999988 88999999999
Q ss_pred CCCHHHHHhhcC-CcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCccccccc---cc
Q 003963 587 RGSLFRLLQRNT-TKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETY---LT 662 (783)
Q Consensus 587 ggsL~~~L~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~---~~ 662 (783)
+++|.+++.... ..+++..++.++.|++.||+|||+++ ++|+||||+||+++.++.+||+|||++....... ..
T Consensus 79 ~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~--i~H~di~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~ 156 (257)
T cd05040 79 LGSLLDRLRKDALGHFLISTLCDYAVQIANGMRYLESKR--FIHRDLAARNILLASDDKVKIGDFGLMRALPQNEDHYVM 156 (257)
T ss_pred CCcHHHHHHhcccccCcHHHHHHHHHHHHHHHHHHHhCC--ccccccCcccEEEecCCEEEeccccccccccccccceec
Confidence 999999997654 56899999999999999999999998 9999999999999999999999999987654321 11
Q ss_pred ccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCChHHHHHHhhcccccccCCCCCCHHHHHHHHH
Q 003963 663 TKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELAT-EKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAAIVES 741 (783)
Q Consensus 663 ~~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~l~~LI~~ 741 (783)
.....++..|+|||.+.+..++.++|||||||++|+|++ |+.||...+..+....+.........+..++..+.+++.+
T Consensus 157 ~~~~~~~~~y~~pE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ 236 (257)
T cd05040 157 EEHLKVPFAWCAPESLRTRTFSHASDVWMFGVTLWEMFTYGEEPWAGLSGSQILKKIDKEGERLERPEACPQDIYNVMLQ 236 (257)
T ss_pred ccCCCCCceecCHHHhcccCcCchhhhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhcCCcCCCCccCCHHHHHHHHH
Confidence 223456788999999999899999999999999999998 9999988877776666554444555667789999999999
Q ss_pred hhhhCCCCCCCHHHHHHHHH
Q 003963 742 CWHSDPQCRPSFQELVDKLR 761 (783)
Q Consensus 742 cL~~dP~~RPsa~ell~~L~ 761 (783)
||..+|.+||++.++++.|.
T Consensus 237 ~l~~~p~~Rps~~~~~~~l~ 256 (257)
T cd05040 237 CWAHNPADRPTFAALREFLP 256 (257)
T ss_pred HCCCCcccCCCHHHHHHHhc
Confidence 99999999999999988764
No 222
>PHA03211 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=4.3e-36 Score=341.42 Aligned_cols=250 Identities=26% Similarity=0.336 Sum_probs=201.5
Q ss_pred ccceeEeeeeccCCcEEEEEEEEeC-CceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEeceeecCCceEEEE
Q 003963 504 WEDLTIGEQIGQGSCGTVYHAVWYG-SQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIVT 582 (783)
Q Consensus 504 ~~~y~i~~~LG~G~fG~Vy~a~~~~-~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lV~ 582 (783)
...|.+.+.||+|+||.||++.+.. ++.||||.... ..+.+|+++|+.|+|+|||++++++...+..++||
T Consensus 168 ~~gy~i~~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~~--------~~~~~E~~iL~~L~HpnIv~l~~~~~~~~~~~lv~ 239 (461)
T PHA03211 168 GLGFAIHRALTPGSEGCVFESSHPDYPQRVVVKAGWY--------ASSVHEARLLRRLSHPAVLALLDVRVVGGLTCLVL 239 (461)
T ss_pred cCCeEEEEEEccCCCeEEEEEEECCCCCEEEEecccc--------cCHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEE
Confidence 4579999999999999999999865 46799996322 23567999999999999999999999999999999
Q ss_pred EecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCcccccccc-
Q 003963 583 EFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETYL- 661 (783)
Q Consensus 583 E~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~~- 661 (783)
|++. ++|..++......+++..++.++.||+.||.|||+++ ||||||||+||||+.++.+||+|||+++.......
T Consensus 240 e~~~-~~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~yLH~~g--IvHrDLKP~NILl~~~~~vkL~DFGla~~~~~~~~~ 316 (461)
T PHA03211 240 PKYR-SDLYTYLGARLRPLGLAQVTAVARQLLSAIDYIHGEG--IIHRDIKTENVLVNGPEDICLGDFGAACFARGSWST 316 (461)
T ss_pred EccC-CCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC--EEECcCCHHHEEECCCCCEEEcccCCceeccccccc
Confidence 9994 6999998766667999999999999999999999998 99999999999999999999999999976543211
Q ss_pred -cccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCC--------hHHHHHHhhccccc-ccC----
Q 003963 662 -TTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLN--------SMQVIGAVGFMNQR-LEI---- 727 (783)
Q Consensus 662 -~~~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~elltG~~Pf~~~~--------~~~~~~~i~~~~~~-~~~---- 727 (783)
......||+.|+|||++.+..++.++|||||||+||||++|..|+-... ..+....+...... ..+
T Consensus 317 ~~~~~~~GT~~Y~APE~~~~~~~~~~sDvwSlGviL~El~~g~~~lf~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~ 396 (461)
T PHA03211 317 PFHYGIAGTVDTNAPEVLAGDPYTPSVDIWSAGLVIFEAAVHTASLFSASRGDERRPYDAQILRIIRQAQVHVDEFPQHA 396 (461)
T ss_pred ccccccCCCcCCcCHHHHcCCCCCchHHHHHHHHHHHHHHHcCCCcccCCcccccCCcHHHHHHHHHhhccccccCCCCc
Confidence 1223569999999999999999999999999999999999876542211 12222222111100 000
Q ss_pred ---------------------------CCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhc
Q 003963 728 ---------------------------PKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQA 770 (783)
Q Consensus 728 ---------------------------~~~~s~~l~~LI~~cL~~dP~~RPsa~ell~~L~~L~~~~f~~ 770 (783)
...++..+.+||.+||+.||.+|||+.|+ |.|+||+.
T Consensus 397 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~DP~~RPsa~el------L~hp~f~~ 460 (461)
T PHA03211 397 GSRLVSQYRHRAARNRRPAYTRPAWTRYYKLDLDVEYLVCRALTFDGARRPSAAEL------LRLPLFQS 460 (461)
T ss_pred chHHHHHHHhhhhcccCCccCCcchhhhccccchHHHHHHHHcccChhhCcCHHHH------hhCcccCC
Confidence 01345688999999999999999999999 78899974
No 223
>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]
Probab=100.00 E-value=7.2e-38 Score=341.24 Aligned_cols=263 Identities=33% Similarity=0.605 Sum_probs=231.2
Q ss_pred ccccccccceeEeeeeccCCcEEEEEEEEeCC---c--eEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEecee
Q 003963 498 LDYEILWEDLTIGEQIGQGSCGTVYHAVWYGS---Q--DVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAV 572 (783)
Q Consensus 498 ~~~e~~~~~y~i~~~LG~G~fG~Vy~a~~~~~---~--~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~ 572 (783)
-+|++..+..++.++||.|.||.||+|.+..- + .||||..+.....++ .+.|.+|.-+|+.++|||||+++|+|
T Consensus 382 rnyel~Re~Itl~r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~t~d~-tekflqEa~iMrnfdHphIikLIGv~ 460 (974)
T KOG4257|consen 382 RNYELRRELITLKRLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTDCTPDD-TEKFLQEASIMRNFDHPHIIKLIGVC 460 (974)
T ss_pred CcceeehhhccHHHhhcCCcccceeeeEecccccCcceeeeeehhccCCChhh-HHHHHHHHHHHHhCCCcchhheeeee
Confidence 46677777888899999999999999987432 2 389998877554444 78899999999999999999999999
Q ss_pred ecCCceEEEEEecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCC
Q 003963 573 TSPQRLCIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGL 652 (783)
Q Consensus 573 ~~~~~~~lV~E~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGl 652 (783)
.+ ...+||||+++.|.|..+|+.+...++......++.||+.||+|||+.+ +|||||...||||.....|||+|||+
T Consensus 461 ~e-~P~WivmEL~~~GELr~yLq~nk~sL~l~tL~ly~~Qi~talaYLeSkr--fVHRDIAaRNiLVsSp~CVKLaDFGL 537 (974)
T KOG4257|consen 461 VE-QPMWIVMELAPLGELREYLQQNKDSLPLRTLTLYCYQICTALAYLESKR--FVHRDIAARNILVSSPQCVKLADFGL 537 (974)
T ss_pred ec-cceeEEEecccchhHHHHHHhccccchHHHHHHHHHHHHHHHHHHHhhc--hhhhhhhhhheeecCcceeeecccch
Confidence 85 5689999999999999999999999999999999999999999999988 99999999999999999999999999
Q ss_pred Ccccccc-cccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCChHHHHHHhhcccccccCCCC
Q 003963 653 SRLKHET-YLTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELAT-EKIPWDNLNSMQVIGAVGFMNQRLEIPKD 730 (783)
Q Consensus 653 a~~~~~~-~~~~~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~ 730 (783)
+++.... +.......-...|||||.+.-..++.++|||.||+.|||++. |..||.+....+++..+. ...+++.|++
T Consensus 538 SR~~ed~~yYkaS~~kLPIKWmaPESINfRrFTtASDVWMFgVCmWEIl~lGvkPfqgvkNsDVI~~iE-nGeRlP~P~n 616 (974)
T KOG4257|consen 538 SRYLEDDAYYKASRGKLPIKWMAPESINFRRFTTASDVWMFGVCMWEILSLGVKPFQGVKNSDVIGHIE-NGERLPCPPN 616 (974)
T ss_pred hhhccccchhhccccccceeecCccccchhcccchhhHHHHHHHHHHHHHhcCCccccccccceEEEec-CCCCCCCCCC
Confidence 9987654 333334445779999999999999999999999999999876 999999988877765553 4568899999
Q ss_pred CCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHH
Q 003963 731 VDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQR 765 (783)
Q Consensus 731 ~s~~l~~LI~~cL~~dP~~RPsa~ell~~L~~L~~ 765 (783)
+|+.+..|+.+||..+|.+||.+.+|...|.++..
T Consensus 617 CPp~LYslmskcWayeP~kRPrftei~~~lsdv~q 651 (974)
T KOG4257|consen 617 CPPALYSLMSKCWAYEPSKRPRFTEIKAILSDVLQ 651 (974)
T ss_pred CChHHHHHHHHHhccCcccCCcHHHHHHHHHHHHH
Confidence 99999999999999999999999999999988866
No 224
>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=4.6e-37 Score=328.29 Aligned_cols=259 Identities=23% Similarity=0.419 Sum_probs=215.2
Q ss_pred cceeEeeeeccCCcEEEEEEEEe-CCceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEeceeecCCceEEEEE
Q 003963 505 EDLTIGEQIGQGSCGTVYHAVWY-GSQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIVTE 583 (783)
Q Consensus 505 ~~y~i~~~LG~G~fG~Vy~a~~~-~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lV~E 583 (783)
++|++.+.||+|+||.||++.+. .++.||+|.+.... .......+.+|+.+++.++||||+++++++..++.+++|||
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~-~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e 79 (286)
T cd06622 1 DEIEVLDELGKGNYGSVYKVLHRPTGVTMAMKEIRLEL-DESKFNQIIMELDILHKAVSPYIVDFYGAFFIEGAVYMCME 79 (286)
T ss_pred ChhhhhhhhcccCCeEEEEEEEcCCCcEEEEEEeeccc-CHHHHHHHHHHHHHHHhcCCCcHHhhhhheecCCeEEEEEe
Confidence 46889999999999999999986 45789999886542 34445678899999999999999999999999999999999
Q ss_pred ecCCCCHHHHHhhc--CCcchHHHHHHHHHHHHHHHHHHHh-CCCCEEecCCCCCCEEEcCCCcEEEEecCCCccccccc
Q 003963 584 FLPRGSLFRLLQRN--TTKLDWRRRILMALDIARGVSYLHH-CNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETY 660 (783)
Q Consensus 584 ~~~ggsL~~~L~~~--~~~l~~~~~~~i~~qi~~aL~~LH~-~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~ 660 (783)
|+++++|..++... ...+++..+..++.||+.||.|||+ ++ |+|+||||+||+++.++.++|+|||++......
T Consensus 80 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~--i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~- 156 (286)
T cd06622 80 YMDAGSLDKLYAGGVATEGIPEDVLRRITYAVVKGLKFLKEEHN--IIHRDVKPTNVLVNGNGQVKLCDFGVSGNLVAS- 156 (286)
T ss_pred ecCCCCHHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhcCC--EeeCCCCHHHEEECCCCCEEEeecCCcccccCC-
Confidence 99999999998753 2368999999999999999999996 47 999999999999999999999999998755432
Q ss_pred ccccCCCCCCcccCcccccCCC------CCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhc--ccccccCCCCCC
Q 003963 661 LTTKTGKGTPQWMAPEVLRNEP------SDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGF--MNQRLEIPKDVD 732 (783)
Q Consensus 661 ~~~~~~~Gt~~Y~aPE~~~~~~------~s~~sDIwSLG~il~elltG~~Pf~~~~~~~~~~~i~~--~~~~~~~~~~~s 732 (783)
......+++.|+|||.+.+.. ++.++|||||||++|+|++|..||...........+.. ......++..++
T Consensus 157 -~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (286)
T cd06622 157 -LAKTNIGCQSYMAPERIKSGGPNQNPTYTVQSDVWSLGLSILEMALGRYPYPPETYANIFAQLSAIVDGDPPTLPSGYS 235 (286)
T ss_pred -ccccCCCccCccCcchhcCCCCCccCCCCcccchHhHHHHHHHHHhCCCCCCCcchhhHHHHHHHHhhcCCCCCCcccC
Confidence 223446788999999986543 47899999999999999999999976655443332221 122345666789
Q ss_pred HHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhcCcCC
Q 003963 733 PRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQASRST 774 (783)
Q Consensus 733 ~~l~~LI~~cL~~dP~~RPsa~ell~~L~~L~~~~f~~~~~~ 774 (783)
.++.+||.+||..+|.+||++.++ +.++||...+..
T Consensus 236 ~~~~~li~~~l~~~p~~Rp~~~~l------~~~~~~~~~~~~ 271 (286)
T cd06622 236 DDAQDFVAKCLNKIPNRRPTYAQL------LEHPWLVKYKNA 271 (286)
T ss_pred HHHHHHHHHHcccCcccCCCHHHH------hcChhhhhccCC
Confidence 999999999999999999999999 578998776654
No 225
>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=100.00 E-value=3.2e-37 Score=325.95 Aligned_cols=251 Identities=26% Similarity=0.408 Sum_probs=205.7
Q ss_pred ccceeEeeeeccCCcEEEEEEEEeC-CceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEeceeecCCceEEEE
Q 003963 504 WEDLTIGEQIGQGSCGTVYHAVWYG-SQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIVT 582 (783)
Q Consensus 504 ~~~y~i~~~LG~G~fG~Vy~a~~~~-~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lV~ 582 (783)
.++|++.++||+|+||.||+|.+.. ++.||+|++...... ....+.+|+.+++.++||||+++++++.....+++||
T Consensus 8 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~--~~~~~~~e~~~l~~~~h~~ii~~~~~~~~~~~~~iv~ 85 (267)
T cd06646 8 QHDYELIQRVGSGTYGDVYKARNLHTGELAAVKIIKLEPGD--DFSLIQQEIFMVKECKHCNIVAYFGSYLSREKLWICM 85 (267)
T ss_pred hhhcchhheeecCCCeEEEEEEECCCCeEEEEEEEecCccc--hHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCEEEEEE
Confidence 4689999999999999999999754 567999998654322 2346788999999999999999999999999999999
Q ss_pred EecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCccccccccc
Q 003963 583 EFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETYLT 662 (783)
Q Consensus 583 E~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~~~ 662 (783)
||+++++|.+++... .++++..+..++.|++.||.|||+.+ |+|+||||+||+++.++.++|+|||++.........
T Consensus 86 e~~~~~~L~~~~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~--i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~~~~ 162 (267)
T cd06646 86 EYCGGGSLQDIYHVT-GPLSELQIAYVCRETLQGLAYLHSKG--KMHRDIKGANILLTDNGDVKLADFGVAAKITATIAK 162 (267)
T ss_pred eCCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCC--ccccCCCHHHEEECCCCCEEECcCccceeecccccc
Confidence 999999999998653 46899999999999999999999998 999999999999999999999999998765433222
Q ss_pred ccCCCCCCcccCccccc---CCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccccc---ccCCCCCCHHHH
Q 003963 663 TKTGKGTPQWMAPEVLR---NEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQR---LEIPKDVDPRWA 736 (783)
Q Consensus 663 ~~~~~Gt~~Y~aPE~~~---~~~~s~~sDIwSLG~il~elltG~~Pf~~~~~~~~~~~i~~~~~~---~~~~~~~s~~l~ 736 (783)
.....|++.|+|||.+. ...++.++|||||||++|+|++|..||...........+...... ...+..++..+.
T Consensus 163 ~~~~~~~~~y~~PE~~~~~~~~~~~~~~Dvws~G~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (267)
T cd06646 163 RKSFIGTPYWMAPEVAAVEKNGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSNFQPPKLKDKTKWSSTFH 242 (267)
T ss_pred cCccccCccccCHhHcccccCCCCcchhhHHHHHHHHHHHHhCCCCccccchhhhheeeecCCCCCCCCccccccCHHHH
Confidence 33456889999999885 344678999999999999999999999766544332222111111 112235688999
Q ss_pred HHHHHhhhhCCCCCCCHHHHHHH
Q 003963 737 AIVESCWHSDPQCRPSFQELVDK 759 (783)
Q Consensus 737 ~LI~~cL~~dP~~RPsa~ell~~ 759 (783)
+||.+||..+|++||++.+++++
T Consensus 243 ~li~~~l~~~P~~Rp~~~~il~~ 265 (267)
T cd06646 243 NFVKISLTKNPKKRPTAERLLTH 265 (267)
T ss_pred HHHHHHhhCChhhCcCHHHHhcC
Confidence 99999999999999999999764
No 226
>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=2e-37 Score=341.69 Aligned_cols=253 Identities=25% Similarity=0.428 Sum_probs=227.8
Q ss_pred cccccceeEeeeeccCCcEEEEEEEEeC-CceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEeceeecCCceE
Q 003963 501 EILWEDLTIGEQIGQGSCGTVYHAVWYG-SQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLC 579 (783)
Q Consensus 501 e~~~~~y~i~~~LG~G~fG~Vy~a~~~~-~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~ 579 (783)
......|.+.+.||+|.|+.|.++++.. +..||||++.+...+....+.+.+|+++|+.|+|||||+++.+.+....+|
T Consensus 52 ~~~vg~y~i~~tig~g~f~~V~La~~~~t~~~VaiK~idkt~ln~~~~~k~~rev~imk~l~HPnIvkl~~v~~t~~~ly 131 (596)
T KOG0586|consen 52 SNSVGLYVIIKTIGKGNFAKVKLARHILTGTEVAIKIIDKTQLNPSKRQKLGREVDIMKSLNHPNIVKLFSVIETEATLY 131 (596)
T ss_pred cccccceeeeeeeccceeEEEEeeEecCCCceEEEEEehhcccChHHHHHHHHHHHHHHhcCCcceeeeeeeeeecceeE
Confidence 4456789999999999999999999754 578999999998888877778999999999999999999999999999999
Q ss_pred EEEEecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCcccccc
Q 003963 580 IVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHET 659 (783)
Q Consensus 580 lV~E~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~~~ 659 (783)
+||||+.+|.++++|.+++. ..+..+..++.|+++|++|||+++ |||||||++||||+.+..+||+|||++..+. .
T Consensus 132 lV~eya~~ge~~~yl~~~gr-~~e~~ar~~F~q~vsaveYcH~k~--ivHrdLk~eNilL~~~mnikIaDfgfS~~~~-~ 207 (596)
T KOG0586|consen 132 LVMEYASGGELFDYLVKHGR-MKEKEARAKFRQIVSAVEYCHSKN--IVHRDLKAENILLDENMNIKIADFGFSTFFD-Y 207 (596)
T ss_pred EEEEeccCchhHHHHHhccc-chhhhhhhhhHHHHHHHHHHhhcc--eeccccchhhcccccccceeeeccccceeec-c
Confidence 99999999999999988764 555889999999999999999998 9999999999999999999999999998877 4
Q ss_pred cccccCCCCCCcccCcccccCCCC-CchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhcccccccCCCCCCHHHHHH
Q 003963 660 YLTTKTGKGTPQWMAPEVLRNEPS-DEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAAI 738 (783)
Q Consensus 660 ~~~~~~~~Gt~~Y~aPE~~~~~~~-s~~sDIwSLG~il~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~l~~L 738 (783)
.....+.+|++.|.|||++.|..+ ++.+|+||||++||-|+.|.+||++.+....-..+ +.+.+.+|..++.++.++
T Consensus 208 ~~~lqt~cgsppyAaPEl~~g~~y~gpe~D~Wslgvvly~LV~GsLPFDG~~lk~Lr~rv--l~gk~rIp~~ms~dce~l 285 (596)
T KOG0586|consen 208 GLMLQTFCGSPPYAAPELFNGKKYDGPEVDIWSLGVVLYALVEGSLPFDGQNLKELRPRV--LRGKYRIPFYMSCDCEDL 285 (596)
T ss_pred cccccccCCCCCccChHhhcCcccCCcceehhhhhhhheeeeecccccCCcccccccchh--eeeeecccceeechhHHH
Confidence 456678999999999999999887 67899999999999999999999988776655444 455677888899999999
Q ss_pred HHHhhhhCCCCCCCHHHHHHH
Q 003963 739 VESCWHSDPQCRPSFQELVDK 759 (783)
Q Consensus 739 I~~cL~~dP~~RPsa~ell~~ 759 (783)
|+++|..+|.+|++.+++.+.
T Consensus 286 Lrk~lvl~Pskr~~~dqim~~ 306 (596)
T KOG0586|consen 286 LRKFLVLNPSKRGPCDQIMKD 306 (596)
T ss_pred HHHhhccCccccCCHHHhhhh
Confidence 999999999999999999543
No 227
>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase. Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ
Probab=100.00 E-value=1.6e-36 Score=318.27 Aligned_cols=250 Identities=33% Similarity=0.616 Sum_probs=213.6
Q ss_pred cceeEeeeeccCCcEEEEEEEEeCCceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEeceeecCCceEEEEEe
Q 003963 505 EDLTIGEQIGQGSCGTVYHAVWYGSQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIVTEF 584 (783)
Q Consensus 505 ~~y~i~~~LG~G~fG~Vy~a~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lV~E~ 584 (783)
.+|++.+.||.|+||.||++.+..+..+++|++....... ..+.+|+++++.++||||+++++++......++||||
T Consensus 4 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~k~~~~~~~~~---~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~ 80 (256)
T cd05112 4 SELTLVQEIGSGQFGLVWLGYWLEKRKVAIKTIREGAMSE---EDFIEEAQVMMKLSHPKLVQLYGVCTERSPICLVFEF 80 (256)
T ss_pred hHeEEEeeecCcccceEEEEEEeCCCeEEEEECCCCCCCH---HHHHHHHHHHHhCCCCCeeeEEEEEccCCceEEEEEc
Confidence 5789999999999999999998767789999987654433 3578899999999999999999999999999999999
Q ss_pred cCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCccccccccc-c
Q 003963 585 LPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETYLT-T 663 (783)
Q Consensus 585 ~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~~~-~ 663 (783)
+++++|.+++......+++..++.++.|++.+|+|||+.+ ++|+||||+||+++.++.++|+|||++......... .
T Consensus 81 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~--i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~~~~ 158 (256)
T cd05112 81 MEHGCLSDYLRAQRGKFSQETLLGMCLDVCEGMAYLESSN--VIHRDLAARNCLVGENQVVKVSDFGMTRFVLDDQYTSS 158 (256)
T ss_pred CCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCC--ccccccccceEEEcCCCeEEECCCcceeecccCccccc
Confidence 9999999999876667899999999999999999999998 999999999999999999999999998754332211 1
Q ss_pred cCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCChHHHHHHhhcccccccCCCCCCHHHHHHHHHh
Q 003963 664 KTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELAT-EKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAAIVESC 742 (783)
Q Consensus 664 ~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~l~~LI~~c 742 (783)
....++..|+|||.+.+..++.++|||||||++|+|++ |..||...........+... .....+...+..+.+|+.+|
T Consensus 159 ~~~~~~~~~~aPe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~ 237 (256)
T cd05112 159 TGTKFPVKWSSPEVFSFSKYSSKSDVWSFGVLMWEVFSEGKTPYENRSNSEVVETINAG-FRLYKPRLASQSVYELMQHC 237 (256)
T ss_pred CCCccchhhcCHhHhccCCcChHHHHHHHHHHHHHHHcCCCCCCCcCCHHHHHHHHhCC-CCCCCCCCCCHHHHHHHHHH
Confidence 12234678999999998889999999999999999998 99999887766666554322 23344566789999999999
Q ss_pred hhhCCCCCCCHHHHHHHH
Q 003963 743 WHSDPQCRPSFQELVDKL 760 (783)
Q Consensus 743 L~~dP~~RPsa~ell~~L 760 (783)
|..+|.+||++.++++.|
T Consensus 238 l~~~p~~Rp~~~~~l~~l 255 (256)
T cd05112 238 WKERPEDRPSFSLLLHQL 255 (256)
T ss_pred cccChhhCCCHHHHHHhh
Confidence 999999999999998876
No 228
>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi
Probab=100.00 E-value=9.9e-37 Score=320.10 Aligned_cols=250 Identities=28% Similarity=0.457 Sum_probs=214.7
Q ss_pred ceeEeeeeccCCcEEEEEEEEeC-CceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEeceeec--CCceEEEE
Q 003963 506 DLTIGEQIGQGSCGTVYHAVWYG-SQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTS--PQRLCIVT 582 (783)
Q Consensus 506 ~y~i~~~LG~G~fG~Vy~a~~~~-~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~--~~~~~lV~ 582 (783)
+|++.+.||.|+||.||++.+.. ++.||+|++............+..|+.+++.++||||+++++++.. ...++++|
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~ 80 (265)
T cd08217 1 DYEVLETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNMTEKEKQQLVSEVNILRELKHPNIVRYYDRIIDRSNQTLYIVM 80 (265)
T ss_pred CceeeeeeccCCCeEEEEeeecCCCCEEEEEEEecccCCHHHHHHHHHHHHHHHhcCCCccceeeeeeecCCCCEEEEEe
Confidence 58899999999999999998754 4679999998766666667788899999999999999999997754 45689999
Q ss_pred EecCCCCHHHHHhhc---CCcchHHHHHHHHHHHHHHHHHHH-----hCCCCEEecCCCCCCEEEcCCCcEEEEecCCCc
Q 003963 583 EFLPRGSLFRLLQRN---TTKLDWRRRILMALDIARGVSYLH-----HCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSR 654 (783)
Q Consensus 583 E~~~ggsL~~~L~~~---~~~l~~~~~~~i~~qi~~aL~~LH-----~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~ 654 (783)
||+++++|.+++... ..++++..++.++.||+.||.||| +.+ |+|+||||+||+++.++.+||+|||++.
T Consensus 81 e~~~~~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~~--i~h~dl~p~nili~~~~~~kl~d~g~~~ 158 (265)
T cd08217 81 EYCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECHNRSDPGNT--VLHRDLKPANIFLDANNNVKLGDFGLAK 158 (265)
T ss_pred hhccCCCHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhcCccccCc--ceecCCCHHHEEEecCCCEEEecccccc
Confidence 999999999999653 456899999999999999999999 777 9999999999999999999999999988
Q ss_pred ccccccccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhcccccccCCCCCCHH
Q 003963 655 LKHETYLTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPR 734 (783)
Q Consensus 655 ~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~ 734 (783)
.............+++.|+|||++.+..++.++|+||||+++|+|++|..||...+.......+.. .....++..++..
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 237 (265)
T cd08217 159 ILGHDSSFAKTYVGTPYYMSPEQLNHMSYDEKSDIWSLGCLIYELCALSPPFTARNQLQLASKIKE-GKFRRIPYRYSSE 237 (265)
T ss_pred cccCCcccccccccCCCccChhhhcCCCCCchhHHHHHHHHHHHHHHCCCcccCcCHHHHHHHHhc-CCCCCCccccCHH
Confidence 765543323345689999999999998899999999999999999999999988776655555432 2334567788999
Q ss_pred HHHHHHHhhhhCCCCCCCHHHHHH
Q 003963 735 WAAIVESCWHSDPQCRPSFQELVD 758 (783)
Q Consensus 735 l~~LI~~cL~~dP~~RPsa~ell~ 758 (783)
+.+++.+||..+|.+||++.+|++
T Consensus 238 ~~~l~~~~l~~~p~~Rp~~~~il~ 261 (265)
T cd08217 238 LNEVIKSMLNVDPDKRPSTEELLQ 261 (265)
T ss_pred HHHHHHHHccCCcccCCCHHHHhh
Confidence 999999999999999999999943
No 229
>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=5e-37 Score=330.86 Aligned_cols=260 Identities=27% Similarity=0.448 Sum_probs=217.4
Q ss_pred cccceeEeeeeccCCcEEEEEEEEe-CCceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEeceeecCCceEEE
Q 003963 503 LWEDLTIGEQIGQGSCGTVYHAVWY-GSQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIV 581 (783)
Q Consensus 503 ~~~~y~i~~~LG~G~fG~Vy~a~~~-~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lV 581 (783)
...+|++.+.||.|+||.||++.+. .++.||+|.+....... ...+.+|+.+++.++||||+++++++...+..|+|
T Consensus 17 ~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~--~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv 94 (297)
T cd06656 17 PKKKYTRFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQPK--KELIINEILVMRENKNPNIVNYLDSYLVGDELWVV 94 (297)
T ss_pred hhhhceeeeeeccCCCeEEEEEEECCCCCEEEEEEEecCccch--HHHHHHHHHHHHhCCCCCEeeEEEEEecCCEEEEe
Confidence 4478999999999999999999975 46789999987654332 35678899999999999999999999999999999
Q ss_pred EEecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCcccccccc
Q 003963 582 TEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETYL 661 (783)
Q Consensus 582 ~E~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~~ 661 (783)
|||+++++|.+++... .+++..+..++.|++.||.|||+.+ |+|+||||+|||++.++.++|+|||++........
T Consensus 95 ~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~l~~~L~~LH~~~--i~H~dL~p~Nili~~~~~~~l~Dfg~~~~~~~~~~ 170 (297)
T cd06656 95 MEYLAGGSLTDVVTET--CMDEGQIAAVCRECLQALDFLHSNQ--VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQS 170 (297)
T ss_pred ecccCCCCHHHHHHhC--CCCHHHHHHHHHHHHHHHHHHHHCC--cccCCCCHHHEEECCCCCEEECcCccceEccCCcc
Confidence 9999999999998653 4788899999999999999999998 99999999999999999999999999875543322
Q ss_pred cccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhcc-cccccCCCCCCHHHHHHHH
Q 003963 662 TTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFM-NQRLEIPKDVDPRWAAIVE 740 (783)
Q Consensus 662 ~~~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~elltG~~Pf~~~~~~~~~~~i~~~-~~~~~~~~~~s~~l~~LI~ 740 (783)
......+++.|+|||.+.+..++.++|+|||||++|+|++|..||...+.......+... ......+..++..+.+||.
T Consensus 171 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slGvil~~l~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~ 250 (297)
T cd06656 171 KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATNGTPELQNPERLSAVFRDFLN 250 (297)
T ss_pred CcCcccCCccccCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcchheeeeccCCCCCCCCccccCHHHHHHHH
Confidence 233446889999999999988999999999999999999999999776554332222111 1122345668899999999
Q ss_pred HhhhhCCCCCCCHHHHHHHHHHHHHHHhhcCcCC
Q 003963 741 SCWHSDPQCRPSFQELVDKLRDLQRQYFQASRST 774 (783)
Q Consensus 741 ~cL~~dP~~RPsa~ell~~L~~L~~~~f~~~~~~ 774 (783)
+||..+|.+||++.++ ++|+||+.-+..
T Consensus 251 ~~l~~~p~~Rps~~~i------l~~~~~~~~~~~ 278 (297)
T cd06656 251 RCLEMDVDRRGSAKEL------LQHPFLKLAKPL 278 (297)
T ss_pred HHccCChhhCcCHHHH------hcCchhcccccc
Confidence 9999999999999999 678999765544
No 230
>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k
Probab=100.00 E-value=1.3e-36 Score=317.97 Aligned_cols=247 Identities=33% Similarity=0.597 Sum_probs=210.8
Q ss_pred eeeccCCcEEEEEEEEeCCceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEeceeecCCceEEEEEecCCCCH
Q 003963 511 EQIGQGSCGTVYHAVWYGSQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIVTEFLPRGSL 590 (783)
Q Consensus 511 ~~LG~G~fG~Vy~a~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lV~E~~~ggsL 590 (783)
++||.|+||.||++.+..++.|++|++...... .....+.+|+.+++.+.|+||+++++++......++||||+++++|
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~v~~K~~~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~l 79 (251)
T cd05041 1 EKIGKGNFGDVYKGVLKGNTEVAVKTCRSTLPP-DLKRKFLQEAEILKQYDHPNIVKLIGVCVQKQPIYIVMELVPGGSL 79 (251)
T ss_pred CccccCCCceEEEEEEeCCCcEEEEeccccCCH-HHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCCeEEEEEcCCCCcH
Confidence 469999999999999877788999998765543 4556789999999999999999999999999999999999999999
Q ss_pred HHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCcccccccccc--cCCCC
Q 003963 591 FRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETYLTT--KTGKG 668 (783)
Q Consensus 591 ~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~~~~--~~~~G 668 (783)
.+++......++...++.++.+++.+|+|||+++ ++||||||+|||++.++.++|+|||++.......... ....+
T Consensus 80 ~~~l~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~--i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~ 157 (251)
T cd05041 80 LTFLRKKKNRLTVKKLLQMSLDAAAGMEYLESKN--CIHRDLAARNCLVGENNVLKISDFGMSREEEGGIYTVSDGLKQI 157 (251)
T ss_pred HHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCC--EehhhcCcceEEEcCCCcEEEeeccccccccCCcceeccccCcc
Confidence 9999776667889999999999999999999998 9999999999999999999999999987554221111 12233
Q ss_pred CCcccCcccccCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCChHHHHHHhhcccccccCCCCCCHHHHHHHHHhhhhCC
Q 003963 669 TPQWMAPEVLRNEPSDEKSDVYSFGVILWELAT-EKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAAIVESCWHSDP 747 (783)
Q Consensus 669 t~~Y~aPE~~~~~~~s~~sDIwSLG~il~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~l~~LI~~cL~~dP 747 (783)
+..|+|||.+.+..++.++|||||||++|+|++ |..||...........+.. ......+..++..+.+||.+||..+|
T Consensus 158 ~~~y~~PE~~~~~~~~~~~Di~slG~i~~~l~t~~~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~li~~~l~~~p 236 (251)
T cd05041 158 PIKWTAPEALNYGRYTSESDVWSYGILLWETFSLGDTPYPGMSNQQTRERIES-GYRMPAPQLCPEEIYRLMLQCWAYDP 236 (251)
T ss_pred eeccCChHhhccCCCCcchhHHHHHHHHHHHHhccCCCCccCCHHHHHHHHhc-CCCCCCCccCCHHHHHHHHHHhccCh
Confidence 567999999998889999999999999999999 8999988776655544432 23445667789999999999999999
Q ss_pred CCCCCHHHHHHHHH
Q 003963 748 QCRPSFQELVDKLR 761 (783)
Q Consensus 748 ~~RPsa~ell~~L~ 761 (783)
.+||++.++++.|+
T Consensus 237 ~~Rp~~~ell~~l~ 250 (251)
T cd05041 237 ENRPSFSEIYNELQ 250 (251)
T ss_pred hhCcCHHHHHHHhh
Confidence 99999999998875
No 231
>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory
Probab=100.00 E-value=9.6e-37 Score=325.36 Aligned_cols=254 Identities=31% Similarity=0.557 Sum_probs=212.9
Q ss_pred cccceeEeeeeccCCcEEEEEEEEeC------CceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEeceeecCC
Q 003963 503 LWEDLTIGEQIGQGSCGTVYHAVWYG------SQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQ 576 (783)
Q Consensus 503 ~~~~y~i~~~LG~G~fG~Vy~a~~~~------~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~ 576 (783)
.+.+|.+.++||+|+||.||++.... +..+++|.+... .......+.+|+++++.++|+||+++++++....
T Consensus 3 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~ 80 (280)
T cd05092 3 KRRDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEA--SESARQDFQREAELLTVLQHQHIVRFYGVCTEGR 80 (280)
T ss_pred ChHhceeccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcC--CHHHHHHHHHHHHHHhcCCCCCCceEEEEEecCC
Confidence 45788999999999999999997532 345888886543 3444567899999999999999999999999999
Q ss_pred ceEEEEEecCCCCHHHHHhhcC--------------CcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCC
Q 003963 577 RLCIVTEFLPRGSLFRLLQRNT--------------TKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKH 642 (783)
Q Consensus 577 ~~~lV~E~~~ggsL~~~L~~~~--------------~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~ 642 (783)
..+++|||+++++|.+++.... ..+++..++.++.||+.||+|||+.+ |+|+||||+|||++++
T Consensus 81 ~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~~--i~H~dlkp~nil~~~~ 158 (280)
T cd05092 81 PLLMVFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLASLH--FVHRDLATRNCLVGQG 158 (280)
T ss_pred ceEEEEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHHHCC--eecccccHhhEEEcCC
Confidence 9999999999999999997543 24788999999999999999999998 9999999999999999
Q ss_pred CcEEEEecCCCccccccc--ccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCChHHHHHHhh
Q 003963 643 WTVKVGDFGLSRLKHETY--LTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELAT-EKIPWDNLNSMQVIGAVG 719 (783)
Q Consensus 643 ~~vkL~DFGla~~~~~~~--~~~~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~ellt-G~~Pf~~~~~~~~~~~i~ 719 (783)
+.+||+|||++....... .......+++.|+|||.+.+..++.++|||||||++|+|++ |.+||...........+.
T Consensus 159 ~~~kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~ 238 (280)
T cd05092 159 LVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDIWSFGVVLWEIFTYGKQPWYQLSNTEAIECIT 238 (280)
T ss_pred CCEEECCCCceeEcCCCceeecCCCccccccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCccCCHHHHHHHHH
Confidence 999999999987543221 11222345788999999999999999999999999999998 999998877766555543
Q ss_pred cccccccCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHH
Q 003963 720 FMNQRLEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLR 761 (783)
Q Consensus 720 ~~~~~~~~~~~~s~~l~~LI~~cL~~dP~~RPsa~ell~~L~ 761 (783)
. ......+..+++.+.+||.+||..||.+||++.++++.|+
T Consensus 239 ~-~~~~~~~~~~~~~~~~li~~cl~~~P~~Rp~~~~l~~~l~ 279 (280)
T cd05092 239 Q-GRELERPRTCPPEVYAIMQGCWQREPQQRMVIKDIHSRLQ 279 (280)
T ss_pred c-CccCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHh
Confidence 2 2234556778999999999999999999999999998775
No 232
>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign
Probab=100.00 E-value=1.5e-36 Score=324.00 Aligned_cols=255 Identities=29% Similarity=0.509 Sum_probs=205.5
Q ss_pred cce-eEeeeeccCCcEEEEEEEEe-----CCceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEeceeecC--C
Q 003963 505 EDL-TIGEQIGQGSCGTVYHAVWY-----GSQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSP--Q 576 (783)
Q Consensus 505 ~~y-~i~~~LG~G~fG~Vy~a~~~-----~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~--~ 576 (783)
++| ++.+.||+|+||.||++.+. .+..||+|++.... .......+.+|+.+|+.++||||+++++++... .
T Consensus 3 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~ 81 (283)
T cd05080 3 KRYLKKIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKREC-GQQNTSGWKKEINILKTLYHENIVKYKGCCSEQGGK 81 (283)
T ss_pred hhhceeceecccCCCcEEEEeeEccccCCCCceEEEEEecccc-ChHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCc
Confidence 345 89999999999999887532 34579999987543 233456788999999999999999999987653 4
Q ss_pred ceEEEEEecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCccc
Q 003963 577 RLCIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLK 656 (783)
Q Consensus 577 ~~~lV~E~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~ 656 (783)
.++++|||+++++|.+++... .+++..++.++.|++.||.|||+++ |+|+||||+|||++.++.++|+|||++...
T Consensus 82 ~~~lv~e~~~~~~l~~~~~~~--~l~~~~~~~i~~~l~~~l~~lH~~~--i~H~dlkp~Nili~~~~~~~l~dfg~~~~~ 157 (283)
T cd05080 82 GLQLIMEYVPLGSLRDYLPKH--KLNLAQLLLFAQQICEGMAYLHSQH--YIHRDLAARNVLLDNDRLVKIGDFGLAKAV 157 (283)
T ss_pred eEEEEecCCCCCCHHHHHHHc--CCCHHHHHHHHHHHHHHHHHHHHCC--eeccccChheEEEcCCCcEEEeeccccccc
Confidence 589999999999999999764 4899999999999999999999998 999999999999999999999999998765
Q ss_pred ccccc---cccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHH--HH------------HHhh
Q 003963 657 HETYL---TTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQ--VI------------GAVG 719 (783)
Q Consensus 657 ~~~~~---~~~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~elltG~~Pf~~~~~~~--~~------------~~i~ 719 (783)
..... ......++..|+|||.+.+..++.++|||||||++|+|++|..||......- .. ....
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (283)
T cd05080 158 PEGHEYYRVREDGDSPVFWYAVECLKENKFSYASDVWSFGVTLYELLTHCDSKQSPPKKFEEMIGPKQGQMTVVRLIELL 237 (283)
T ss_pred CCcchhhccCCCCCCCceeeCHhHhcccCCCcccccHHHHHHHHHHHhCCCCCCCCcchhhhhhcccccccchhhhhhhh
Confidence 43221 1122345677999999998889999999999999999999999986543210 00 0000
Q ss_pred cccccccCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHH
Q 003963 720 FMNQRLEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQ 764 (783)
Q Consensus 720 ~~~~~~~~~~~~s~~l~~LI~~cL~~dP~~RPsa~ell~~L~~L~ 764 (783)
........+..++.++.+++..||+.+|++||++.+++..|+++.
T Consensus 238 ~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~i~~~l~~~~ 282 (283)
T cd05080 238 ERGMRLPCPKNCPQEVYILMKNCWETEAKFRPTFRSLIPILKEMH 282 (283)
T ss_pred hcCCCCCCCCCCCHHHHHHHHHHhccChhhCCCHHHHHHHHHHhh
Confidence 111223346678899999999999999999999999999998774
No 233
>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=1.5e-36 Score=332.69 Aligned_cols=264 Identities=31% Similarity=0.583 Sum_probs=220.4
Q ss_pred ccccccccceeEeeeeccCCcEEEEEEEEeC--------CceEEEEEEecccCCHHHHHHHHHHHHHHHhC-CCCceeeE
Q 003963 498 LDYEILWEDLTIGEQIGQGSCGTVYHAVWYG--------SQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRL-RHPNVLLF 568 (783)
Q Consensus 498 ~~~e~~~~~y~i~~~LG~G~fG~Vy~a~~~~--------~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l-~HpnIv~l 568 (783)
..|+....+|++++.||+|+||.||+|.+.. ...||+|++... ........+.+|+.+++.+ +||||+++
T Consensus 5 ~~~~~~~~~~~i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~~~E~~~l~~l~~h~~iv~~ 83 (334)
T cd05100 5 PKWELSRTRLTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDD-ATDKDLSDLVSEMEMMKMIGKHKNIINL 83 (334)
T ss_pred cccccCHhHeeecceeccccCCcEEEEEEeccCCccCCcceeEEEEEcccc-cCHHHHHHHHHHHHHHHhhcCCCCeeee
Confidence 3566777789999999999999999998642 125899987643 2344567888999999999 79999999
Q ss_pred eceeecCCceEEEEEecCCCCHHHHHhhcC---------------CcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCC
Q 003963 569 MGAVTSPQRLCIVTEFLPRGSLFRLLQRNT---------------TKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLK 633 (783)
Q Consensus 569 ~~~~~~~~~~~lV~E~~~ggsL~~~L~~~~---------------~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIK 633 (783)
++++...+.++++|||+++++|.+++.... ..+++..++.++.||+.||.|||+++ |+|||||
T Consensus 84 ~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~g--ivH~dlk 161 (334)
T cd05100 84 LGACTQDGPLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLASQK--CIHRDLA 161 (334)
T ss_pred eEEEccCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCC--eeccccc
Confidence 999999999999999999999999996532 24778888999999999999999998 9999999
Q ss_pred CCCEEEcCCCcEEEEecCCCcccccccc--cccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCC
Q 003963 634 SSNLLVDKHWTVKVGDFGLSRLKHETYL--TTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELAT-EKIPWDNLN 710 (783)
Q Consensus 634 p~NILl~~~~~vkL~DFGla~~~~~~~~--~~~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~ellt-G~~Pf~~~~ 710 (783)
|+|||++.++.+||+|||+++....... ......++..|+|||++.+..++.++|||||||++|+|++ |..||...+
T Consensus 162 p~Nill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~ 241 (334)
T cd05100 162 ARNVLVTEDNVMKIADFGLARDVHNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIP 241 (334)
T ss_pred cceEEEcCCCcEEECCcccceecccccccccccCCCcCceEcCHHHhccCCcCchhhhHHHHHHHHHHHhcCCCCCCCCC
Confidence 9999999999999999999875543221 1222334568999999999999999999999999999998 899998887
Q ss_pred hHHHHHHhhcccccccCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHH
Q 003963 711 SMQVIGAVGFMNQRLEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQR 765 (783)
Q Consensus 711 ~~~~~~~i~~~~~~~~~~~~~s~~l~~LI~~cL~~dP~~RPsa~ell~~L~~L~~ 765 (783)
..+....+. .......+..++.++.+||.+||+.+|.+||++.++++.|+++..
T Consensus 242 ~~~~~~~~~-~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~ell~~l~~~~~ 295 (334)
T cd05100 242 VEELFKLLK-EGHRMDKPANCTHELYMIMRECWHAVPSQRPTFKQLVEDLDRVLT 295 (334)
T ss_pred HHHHHHHHH-cCCCCCCCCCCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHhh
Confidence 776665543 223445667788999999999999999999999999999988863
No 234
>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea
Probab=100.00 E-value=2.1e-36 Score=322.26 Aligned_cols=257 Identities=29% Similarity=0.542 Sum_probs=218.4
Q ss_pred ccceeEeeeeccCCcEEEEEEEEeCC-----ceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEeceeecCCce
Q 003963 504 WEDLTIGEQIGQGSCGTVYHAVWYGS-----QDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRL 578 (783)
Q Consensus 504 ~~~y~i~~~LG~G~fG~Vy~a~~~~~-----~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~ 578 (783)
..+|++.+.||+|+||.||+|.+... ..+|+|++..... ......+.+|+.+++.++||||+++++++.. ...
T Consensus 6 ~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~ 83 (279)
T cd05057 6 ETELEKIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETS-PKANKEILDEAYVMASVDHPHVVRLLGICLS-SQV 83 (279)
T ss_pred HHHcEEcceecCCCCccEEEEEEecCCCCcceEEEEEeccCCCC-HHHHHHHHHHHHHHHhCCCCCcceEEEEEec-Cce
Confidence 46899999999999999999987542 2489998765543 4455678899999999999999999999887 789
Q ss_pred EEEEEecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCccccc
Q 003963 579 CIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHE 658 (783)
Q Consensus 579 ~lV~E~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~~ 658 (783)
++||||+++++|.+++......+++..++.++.||+.||+|||+++ |+|+||||+|||++.++.+||+|||+++....
T Consensus 84 ~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~--i~H~di~p~nil~~~~~~~kL~dfg~~~~~~~ 161 (279)
T cd05057 84 QLITQLMPLGCLLDYVRNHKDNIGSQYLLNWCVQIAKGMSYLEEKR--LVHRDLAARNVLVKTPQHVKITDFGLAKLLDV 161 (279)
T ss_pred EEEEecCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCC--EEecccCcceEEEcCCCeEEECCCcccccccC
Confidence 9999999999999999877667999999999999999999999988 99999999999999999999999999976543
Q ss_pred cccc--ccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCChHHHHHHhhcccccccCCCCCCHHH
Q 003963 659 TYLT--TKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELAT-EKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRW 735 (783)
Q Consensus 659 ~~~~--~~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~l 735 (783)
.... .....++..|+|||.+....++.++|+|||||++|+|++ |..||......+....+. .......+..++..+
T Consensus 162 ~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 240 (279)
T cd05057 162 DEKEYHAEGGKVPIKWMALESILHRIYTHKSDVWSYGVTVWELMTFGAKPYEGIPAVEIPDLLE-KGERLPQPPICTIDV 240 (279)
T ss_pred cccceecCCCcccccccCHHHhhcCCcCchhhHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHh-CCCCCCCCCCCCHHH
Confidence 2211 112223568999999988889999999999999999998 999999887766655553 233455667788999
Q ss_pred HHHHHHhhhhCCCCCCCHHHHHHHHHHHHH
Q 003963 736 AAIVESCWHSDPQCRPSFQELVDKLRDLQR 765 (783)
Q Consensus 736 ~~LI~~cL~~dP~~RPsa~ell~~L~~L~~ 765 (783)
.+++.+||..+|..||++.++++.|+++..
T Consensus 241 ~~~~~~~l~~~p~~Rp~~~~l~~~l~~~~~ 270 (279)
T cd05057 241 YMVLVKCWMIDAESRPTFKELINEFSKMAR 270 (279)
T ss_pred HHHHHHHcCCChhhCCCHHHHHHHHHHHHh
Confidence 999999999999999999999999998854
No 235
>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity
Probab=100.00 E-value=3.6e-37 Score=324.67 Aligned_cols=254 Identities=28% Similarity=0.491 Sum_probs=214.1
Q ss_pred cceeEeeeeccCCcEEEEEEEEeC-CceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEeceeecCCceEEEEE
Q 003963 505 EDLTIGEQIGQGSCGTVYHAVWYG-SQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIVTE 583 (783)
Q Consensus 505 ~~y~i~~~LG~G~fG~Vy~a~~~~-~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lV~E 583 (783)
++|++.+.||.|+||.||++.+.. ++.|++|++..... ......+.+|+.+++.++||||+++++++.....++++||
T Consensus 1 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~~-~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e 79 (265)
T cd06605 1 DDLEYLGELGAGNSGVVSKVLHRPTGKIMAVKTIRLEIN-EAIQKQILRELDILHKCNSPYIVGFYGAFYNNGDISICME 79 (265)
T ss_pred CcchHHHHhcCCCCeEEEEEEEcCCCcEEEEEEEecccC-hHHHHHHHHHHHHHHHCCCCchhhhheeeecCCEEEEEEE
Confidence 367888999999999999999874 57799999876543 3455678899999999999999999999999999999999
Q ss_pred ecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHh-CCCCEEecCCCCCCEEEcCCCcEEEEecCCCccccccccc
Q 003963 584 FLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHH-CNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETYLT 662 (783)
Q Consensus 584 ~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~-~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~~~ 662 (783)
|+++++|.+++......+++..+..++.|++.||+|||+ .+ ++|+||||+||+++.++.++|+|||.+.........
T Consensus 80 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~--i~H~dl~~~ni~~~~~~~~~l~d~g~~~~~~~~~~~ 157 (265)
T cd06605 80 YMDGGSLDKILKEVQGRIPERILGKIAVAVLKGLTYLHEKHK--IIHRDVKPSNILVNSRGQIKLCDFGVSGQLVNSLAK 157 (265)
T ss_pred ecCCCcHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHcCCCC--eecCCCCHHHEEECCCCCEEEeecccchhhHHHHhh
Confidence 999999999998765678999999999999999999999 88 999999999999999999999999998655433221
Q ss_pred ccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCC-----hHHHHHHhhcccccccCCCC-CCHHHH
Q 003963 663 TKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLN-----SMQVIGAVGFMNQRLEIPKD-VDPRWA 736 (783)
Q Consensus 663 ~~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~elltG~~Pf~~~~-----~~~~~~~i~~~~~~~~~~~~-~s~~l~ 736 (783)
...++..|+|||.+.+..++.++|||||||++|+|++|..||.... .......+. .......+.. ++.++.
T Consensus 158 --~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 234 (265)
T cd06605 158 --TFVGTSSYMAPERIQGNDYSVKSDIWSLGLSLIELATGRFPYPPENDPPDGIFELLQYIV-NEPPPRLPSGKFSPDFQ 234 (265)
T ss_pred --cccCChhccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCccccccccHHHHHHHHh-cCCCCCCChhhcCHHHH
Confidence 2567899999999999999999999999999999999999997552 222222221 1122333443 889999
Q ss_pred HHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhc
Q 003963 737 AIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQA 770 (783)
Q Consensus 737 ~LI~~cL~~dP~~RPsa~ell~~L~~L~~~~f~~ 770 (783)
+||.+||..+|.+||++.++ +.++||+.
T Consensus 235 ~li~~~l~~~p~~Rpt~~~l------l~~~~~~~ 262 (265)
T cd06605 235 DFVNLCLIKDPRERPSYKEL------LEHPFIKK 262 (265)
T ss_pred HHHHHHcCCCchhCcCHHHH------hhCchhhc
Confidence 99999999999999999999 67899975
No 236
>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit
Probab=100.00 E-value=1.2e-36 Score=327.37 Aligned_cols=256 Identities=32% Similarity=0.543 Sum_probs=209.4
Q ss_pred cccceeEeeeeccCCcEEEEEEEEeC-----------------CceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCce
Q 003963 503 LWEDLTIGEQIGQGSCGTVYHAVWYG-----------------SQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNV 565 (783)
Q Consensus 503 ~~~~y~i~~~LG~G~fG~Vy~a~~~~-----------------~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnI 565 (783)
..++|++.++||+|+||.||++.+.. ...||+|++.... .......+.+|+.+++.++|+||
T Consensus 3 ~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~-~~~~~~~~~~E~~~l~~l~~~~i 81 (296)
T cd05095 3 PRKRLTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDA-NKNARNDFLKEIKIMSRLKDPNI 81 (296)
T ss_pred ChhhceeeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccC-CHHHHHHHHHHHHHHHhCCCCCc
Confidence 34689999999999999999986432 2358999886543 34445678899999999999999
Q ss_pred eeEeceeecCCceEEEEEecCCCCHHHHHhhcC----------CcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCC
Q 003963 566 LLFMGAVTSPQRLCIVTEFLPRGSLFRLLQRNT----------TKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSS 635 (783)
Q Consensus 566 v~l~~~~~~~~~~~lV~E~~~ggsL~~~L~~~~----------~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~ 635 (783)
+++++++...+..++||||+++++|.+++.... ..+++..++.++.||+.||+|||+++ |+|+||||+
T Consensus 82 ~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~--i~H~dlkp~ 159 (296)
T cd05095 82 IRLLAVCITSDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLSSLN--FVHRDLATR 159 (296)
T ss_pred ceEEEEEecCCccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHHHCC--eecccCChh
Confidence 999999999999999999999999999987532 23667889999999999999999998 999999999
Q ss_pred CEEEcCCCcEEEEecCCCcccccccc--cccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHc--CCCCCCCCCh
Q 003963 636 NLLVDKHWTVKVGDFGLSRLKHETYL--TTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELAT--EKIPWDNLNS 711 (783)
Q Consensus 636 NILl~~~~~vkL~DFGla~~~~~~~~--~~~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~ellt--G~~Pf~~~~~ 711 (783)
|||++.++.++|+|||++........ ......+++.|++||+..+..++.++|||||||++|||++ |..||...+.
T Consensus 160 Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~DiwSlG~~l~el~~~~~~~p~~~~~~ 239 (296)
T cd05095 160 NCLVGKNYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMSWESILLGKFTTASDVWAFGVTLWEILTLCKEQPYSQLSD 239 (296)
T ss_pred eEEEcCCCCEEeccCcccccccCCcceeccCcCcCccccCCHHHHhcCCccchhhhhHHHHHHHHHHHhCCCCCccccCh
Confidence 99999999999999999875433211 1112234678999999888889999999999999999998 7899987776
Q ss_pred HHHHHHhhc------ccccccCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHH
Q 003963 712 MQVIGAVGF------MNQRLEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLR 761 (783)
Q Consensus 712 ~~~~~~i~~------~~~~~~~~~~~s~~l~~LI~~cL~~dP~~RPsa~ell~~L~ 761 (783)
.+....... .....+.+..+++.+.+||.+||+.||.+||++.+|++.|+
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~ 295 (296)
T cd05095 240 EQVIENTGEFFRDQGRQVYLPKPALCPDSLYKLMLSCWRRNAKERPSFQEIHATLL 295 (296)
T ss_pred HHHHHHHHHHHhhccccccCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHHh
Confidence 655443211 11123445668899999999999999999999999998875
No 237
>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase. Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M
Probab=100.00 E-value=1.2e-36 Score=325.61 Aligned_cols=255 Identities=29% Similarity=0.516 Sum_probs=213.6
Q ss_pred cccceeEeeeeccCCcEEEEEEEEeC------CceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEeceeecCC
Q 003963 503 LWEDLTIGEQIGQGSCGTVYHAVWYG------SQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQ 576 (783)
Q Consensus 503 ~~~~y~i~~~LG~G~fG~Vy~a~~~~------~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~ 576 (783)
..++|++.+.||+|+||.||+|.+.+ ...||+|++.... .......+.+|+.+++.+.||||+++++++..+.
T Consensus 3 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~-~~~~~~~~~~ei~~l~~l~h~~iv~~~~~~~~~~ 81 (288)
T cd05050 3 PRNNIEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEA-SADMQADFQREAALMAEFDHPNIVKLLGVCAVGK 81 (288)
T ss_pred ChHhceecccccccccccEEEEEEcccCCCCcceeEEEEecCCCc-CHHHHHHHHHHHHHHHhcCCCchheEEEEEcCCC
Confidence 35689999999999999999998642 4579999986543 3445567889999999999999999999999999
Q ss_pred ceEEEEEecCCCCHHHHHhhcC---------------------CcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCC
Q 003963 577 RLCIVTEFLPRGSLFRLLQRNT---------------------TKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSS 635 (783)
Q Consensus 577 ~~~lV~E~~~ggsL~~~L~~~~---------------------~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~ 635 (783)
.++++|||+++++|.+++.... ..+++..++.++.||+.||.|||+.+ ++||||||+
T Consensus 82 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH~~~--i~H~dl~p~ 159 (288)
T cd05050 82 PMCLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLSERK--FVHRDLATR 159 (288)
T ss_pred ccEEEEecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCC--eecccccHh
Confidence 9999999999999999996421 24678889999999999999999998 999999999
Q ss_pred CEEEcCCCcEEEEecCCCccccccc--ccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCChH
Q 003963 636 NLLVDKHWTVKVGDFGLSRLKHETY--LTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELAT-EKIPWDNLNSM 712 (783)
Q Consensus 636 NILl~~~~~vkL~DFGla~~~~~~~--~~~~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~ellt-G~~Pf~~~~~~ 712 (783)
|||++.++.++|+|||++....... .......++..|+|||.+.+..++.++|||||||++|+|++ |..||......
T Consensus 160 nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~~~~p~~~~~~~ 239 (288)
T cd05050 160 NCLVGENMVVKIADFGLSRNIYSADYYKASENDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGMQPYYGMAHE 239 (288)
T ss_pred heEecCCCceEECccccceecccCccccccCCCccChhhcCHHHHhcCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCHH
Confidence 9999999999999999987543221 11222344678999999999899999999999999999997 88999888777
Q ss_pred HHHHHhhcccccccCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHH
Q 003963 713 QVIGAVGFMNQRLEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLR 761 (783)
Q Consensus 713 ~~~~~i~~~~~~~~~~~~~s~~l~~LI~~cL~~dP~~RPsa~ell~~L~ 761 (783)
+....+... .....+..++.++.+||.+||+.+|.+||++.++++.|+
T Consensus 240 ~~~~~~~~~-~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~el~~~l~ 287 (288)
T cd05050 240 EVIYYVRDG-NVLSCPDNCPLELYNLMRLCWSKLPSDRPSFASINRILQ 287 (288)
T ss_pred HHHHHHhcC-CCCCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHhh
Confidence 666555322 233456678899999999999999999999999998875
No 238
>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops
Probab=100.00 E-value=1e-36 Score=319.34 Aligned_cols=248 Identities=33% Similarity=0.565 Sum_probs=213.4
Q ss_pred ceeEeeeeccCCcEEEEEEEEe-CCceEEEEEEecccC---CHHHHHHHHHHHHHHHhCCCCceeeEeceeecCCceEEE
Q 003963 506 DLTIGEQIGQGSCGTVYHAVWY-GSQDVAVKVFSRQEY---SDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIV 581 (783)
Q Consensus 506 ~y~i~~~LG~G~fG~Vy~a~~~-~~~~vAiK~i~~~~~---~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lV 581 (783)
+|+..+.||+|+||.||+|... .++.|++|++..... ..+..+.+.+|+.+++.++|+||+++++++.....++++
T Consensus 1 ~~~~~~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv 80 (258)
T cd06632 1 RWRKGELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQYLGTEREEDNLYIF 80 (258)
T ss_pred CccccceeeecCCceEEEEEEcCCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhcCCCCchheeeeEecCCeEEEE
Confidence 4777899999999999999986 567899999865432 245567889999999999999999999999999999999
Q ss_pred EEecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCcccccccc
Q 003963 582 TEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETYL 661 (783)
Q Consensus 582 ~E~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~~ 661 (783)
|||+++++|.+++.+.. .+++..++.++.||+.||+|||+.+ |+|+||+|+||+++.++.+||+|||++.......
T Consensus 81 ~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~i~~~l~~lH~~~--i~H~dl~~~ni~~~~~~~~kl~d~~~~~~~~~~~- 156 (258)
T cd06632 81 LELVPGGSLAKLLKKYG-SFPEPVIRLYTRQILLGLEYLHDRN--TVHRDIKGANILVDTNGVVKLADFGMAKQVVEFS- 156 (258)
T ss_pred EEecCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCC--cccCCCCHHHEEECCCCCEEEccCccceeccccc-
Confidence 99999999999997643 5889999999999999999999998 9999999999999999999999999987654332
Q ss_pred cccCCCCCCcccCcccccCCC-CCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhcccccccCCCCCCHHHHHHHH
Q 003963 662 TTKTGKGTPQWMAPEVLRNEP-SDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAAIVE 740 (783)
Q Consensus 662 ~~~~~~Gt~~Y~aPE~~~~~~-~s~~sDIwSLG~il~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~l~~LI~ 740 (783)
......|+..|++||.+.... ++.++|+|||||++|+|++|..||...........+........++..+++.+.+||.
T Consensus 157 ~~~~~~~~~~y~~pe~~~~~~~~~~~~D~~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~ 236 (258)
T cd06632 157 FAKSFKGSPYWMAPEVIAQQGGYGLAADIWSLGCTVLEMATGKPPWSQLEGVAAVFKIGRSKELPPIPDHLSDEAKDFIL 236 (258)
T ss_pred cccccCCCcceeCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcccCcHHHHHHHHHhcccCCCcCCCcCHHHHHHHH
Confidence 223456889999999988776 8999999999999999999999998777655554544434455677788999999999
Q ss_pred HhhhhCCCCCCCHHHHH
Q 003963 741 SCWHSDPQCRPSFQELV 757 (783)
Q Consensus 741 ~cL~~dP~~RPsa~ell 757 (783)
+||..+|.+||++.+++
T Consensus 237 ~~l~~~p~~Rp~~~~~l 253 (258)
T cd06632 237 KCLQRDPSLRPTAAELL 253 (258)
T ss_pred HHhhcCcccCcCHHHHh
Confidence 99999999999999994
No 239
>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=3.4e-38 Score=347.95 Aligned_cols=253 Identities=31% Similarity=0.506 Sum_probs=215.6
Q ss_pred eEeeeeccCCcEEEEEEEEeCC-ceEEEEEEec--ccCCHHHHHHHHHHHHHHHhCCCCceeeEeceeecCCc--eEEEE
Q 003963 508 TIGEQIGQGSCGTVYHAVWYGS-QDVAVKVFSR--QEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQR--LCIVT 582 (783)
Q Consensus 508 ~i~~~LG~G~fG~Vy~a~~~~~-~~vAiK~i~~--~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~--~~lV~ 582 (783)
+...+||+|+|-+||+|.+... -+||--.++. ...+...+++|..|+.+|+.|+|||||+||.+|.+... +.+|+
T Consensus 43 k~~evLGrGafKtVYka~De~~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL~H~NIirfy~SW~d~~n~~in~iT 122 (632)
T KOG0584|consen 43 KFDEVLGRGAFKTVYKAFDEEEGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKSLKHPNIIRFYDSWVDTDNKTINFIT 122 (632)
T ss_pred ehhhhcccccceeeeeccccccchhhHHHHHhHHHhhcChHHHHHHHHHHHHHccCCCCceeeeeeheecCCCceeeeee
Confidence 4457899999999999998543 3454333222 22345667899999999999999999999999987665 78899
Q ss_pred EecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcC-CCcEEEEecCCCcccccccc
Q 003963 583 EFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDK-HWTVKVGDFGLSRLKHETYL 661 (783)
Q Consensus 583 E~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~-~~~vkL~DFGla~~~~~~~~ 661 (783)
|.+..|+|..|+++.+ +++...+..|++||++||.|||++.++|||||||.+||+|+. .|.|||+|+|+|........
T Consensus 123 EL~TSGtLr~Y~kk~~-~vn~kaik~W~RQILkGL~yLHs~~PPIIHRDLKCDNIFinG~~G~VKIGDLGLAtl~r~s~a 201 (632)
T KOG0584|consen 123 ELFTSGTLREYRKKHR-RVNIKAIKSWCRQILKGLVYLHSQDPPIIHRDLKCDNIFVNGNLGEVKIGDLGLATLLRKSHA 201 (632)
T ss_pred ecccCCcHHHHHHHhc-cCCHHHHHHHHHHHHHHhhhhhcCCCCccccccccceEEEcCCcCceeecchhHHHHhhcccc
Confidence 9999999999998765 588999999999999999999999999999999999999975 58999999999998777644
Q ss_pred cccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCC-ChHHHHHHhhcccccccCCCCCCHHHHHHHH
Q 003963 662 TTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNL-NSMQVIGAVGFMNQRLEIPKDVDPRWAAIVE 740 (783)
Q Consensus 662 ~~~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~elltG~~Pf~~~-~~~~~~~~i~~~~~~~~~~~~~s~~l~~LI~ 740 (783)
. ..+|||.|||||++. ..|+..+||||||+.|+||+|+.+||... ++.+++..+......-.+.+.-+++.++||.
T Consensus 202 k--svIGTPEFMAPEmYE-E~YnE~VDVYaFGMCmLEMvT~eYPYsEC~n~AQIYKKV~SGiKP~sl~kV~dPevr~fIe 278 (632)
T KOG0584|consen 202 K--SVIGTPEFMAPEMYE-ENYNELVDVYAFGMCMLEMVTSEYPYSECTNPAQIYKKVTSGIKPAALSKVKDPEVREFIE 278 (632)
T ss_pred c--eeccCccccChHHHh-hhcchhhhhhhhhHHHHHHHhccCChhhhCCHHHHHHHHHcCCCHHHhhccCCHHHHHHHH
Confidence 3 368999999999998 77999999999999999999999999765 5667777775555555566667899999999
Q ss_pred HhhhhCCCCCCCHHHHHHHHHHHHHHHhhcC
Q 003963 741 SCWHSDPQCRPSFQELVDKLRDLQRQYFQAS 771 (783)
Q Consensus 741 ~cL~~dP~~RPsa~ell~~L~~L~~~~f~~~ 771 (783)
+||.. ..+|||+.|| |.++||...
T Consensus 279 kCl~~-~~~R~sa~eL------L~d~Ff~~d 302 (632)
T KOG0584|consen 279 KCLAT-KSERLSAKEL------LKDPFFDED 302 (632)
T ss_pred HHhcC-chhccCHHHH------hhChhhccc
Confidence 99999 8999999999 789999876
No 240
>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re
Probab=100.00 E-value=1.9e-36 Score=319.81 Aligned_cols=254 Identities=30% Similarity=0.510 Sum_probs=211.0
Q ss_pred cceeEeeeeccCCcEEEEEEEEeC-CceEEEEEEecccC---CHHHHHHHHHHHHHHHhCCCCceeeEeceeecC--Cce
Q 003963 505 EDLTIGEQIGQGSCGTVYHAVWYG-SQDVAVKVFSRQEY---SDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSP--QRL 578 (783)
Q Consensus 505 ~~y~i~~~LG~G~fG~Vy~a~~~~-~~~vAiK~i~~~~~---~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~--~~~ 578 (783)
.+|++.+.||+|+||.||++.+.. +..|+||++..... .......+.+|+.+++.++||||+++++++... ..+
T Consensus 2 ~~~~~~~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (265)
T cd06652 2 TNWRLGKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERIVQYYGCLRDPMERTL 81 (265)
T ss_pred CcceEeeEEecCCceEEEEEEEcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhcCCCCeeeEEeEeccCCCceE
Confidence 478999999999999999999765 56899998864332 234567888999999999999999999988763 468
Q ss_pred EEEEEecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCccccc
Q 003963 579 CIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHE 658 (783)
Q Consensus 579 ~lV~E~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~~ 658 (783)
+++|||+++++|.+++... ..+++..++.++.|++.||.|||+++ |+|+||||+|||++.++.++|+|||++.....
T Consensus 82 ~~v~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~l~~~l~~lH~~~--i~H~dl~p~nil~~~~~~~~l~Dfg~~~~~~~ 158 (265)
T cd06652 82 SIFMEHMPGGSIKDQLKSY-GALTENVTRKYTRQILEGVSYLHSNM--IVHRDIKGANILRDSVGNVKLGDFGASKRLQT 158 (265)
T ss_pred EEEEEecCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHhCC--EecCCCCHHHEEecCCCCEEECcCcccccccc
Confidence 8999999999999998764 34788889999999999999999998 99999999999999999999999999875432
Q ss_pred cc---ccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhcccccccCCCCCCHHH
Q 003963 659 TY---LTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRW 735 (783)
Q Consensus 659 ~~---~~~~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~l 735 (783)
.. .......|+..|+|||++.+..++.++|||||||++|+|++|+.||.....................|..++..+
T Consensus 159 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (265)
T cd06652 159 ICLSGTGMKSVTGTPYWMSPEVISGEGYGRKADIWSVGCTVVEMLTEKPPWAEFEAMAAIFKIATQPTNPVLPPHVSDHC 238 (265)
T ss_pred ccccccccccCCCCccccChhhhcCCCCCcchhHHHHHHHHHHHhhCCCCCCccchHHHHHHHhcCCCCCCCchhhCHHH
Confidence 11 112234588899999999988899999999999999999999999987765555444433333455667788899
Q ss_pred HHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHh
Q 003963 736 AAIVESCWHSDPQCRPSFQELVDKLRDLQRQYF 768 (783)
Q Consensus 736 ~~LI~~cL~~dP~~RPsa~ell~~L~~L~~~~f 768 (783)
.++|.+||. +|.+||++.++ ++|+|+
T Consensus 239 ~~~i~~~l~-~p~~Rp~~~~i------l~~~~~ 264 (265)
T cd06652 239 RDFLKRIFV-EAKLRPSADEL------LRHTFV 264 (265)
T ss_pred HHHHHHHhc-ChhhCCCHHHH------hcCccc
Confidence 999999995 99999999999 566665
No 241
>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase. Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea
Probab=100.00 E-value=1.2e-36 Score=324.27 Aligned_cols=254 Identities=26% Similarity=0.351 Sum_probs=211.5
Q ss_pred ceeEeeeeccCCcEEEEEEEEeC-CceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEeceeecCCceEEEEEe
Q 003963 506 DLTIGEQIGQGSCGTVYHAVWYG-SQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIVTEF 584 (783)
Q Consensus 506 ~y~i~~~LG~G~fG~Vy~a~~~~-~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lV~E~ 584 (783)
+|++.+.||.|+||.||+|.+.. ++.|++|++............+.+|+.+++.++||||+++++++.....+++||||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~ 80 (286)
T cd07832 1 RYKILGRIGEGAHGIVFKAKDRETGETVALKKVALRRLEGGIPNQALREIKALQACQHPYVVKLLDVFPHGSGFVLVMEY 80 (286)
T ss_pred CceEEeecccCCCcEEEEEEECCCCceEEEEEEEcccccchhhHHHHHHHHHHHhCCCCCCcceeeEEecCCeeEEEecc
Confidence 58999999999999999999754 57899999987665455567788999999999999999999999999999999999
Q ss_pred cCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCcccccccc-cc
Q 003963 585 LPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETYL-TT 663 (783)
Q Consensus 585 ~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~~-~~ 663 (783)
+ +++|.+++......+++..++.++.||+.||+|||+.+ |+|+||||+||+++.++.++|+|||++........ ..
T Consensus 81 ~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~--i~H~dl~p~ni~~~~~~~~~l~dfg~~~~~~~~~~~~~ 157 (286)
T cd07832 81 M-PSDLSEVLRDEERPLPEAQVKSYMRMLLKGVAYMHANG--IMHRDLKPANLLISADGVLKIADFGLARLFSEEEPRLY 157 (286)
T ss_pred c-CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC--eecCCcCHHHEEEcCCCcEEEeeeeecccccCCCCCcc
Confidence 9 99999999776677999999999999999999999998 99999999999999999999999999876544321 12
Q ss_pred cCCCCCCcccCcccccCCC-CCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccccc------------------
Q 003963 664 KTGKGTPQWMAPEVLRNEP-SDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQR------------------ 724 (783)
Q Consensus 664 ~~~~Gt~~Y~aPE~~~~~~-~s~~sDIwSLG~il~elltG~~Pf~~~~~~~~~~~i~~~~~~------------------ 724 (783)
....|+..|+|||++.+.. ++.++|||||||++|+|++|.+||...........+......
T Consensus 158 ~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (286)
T cd07832 158 SHQVATRWYRAPELLYGARKYDPGVDLWAVGCIFAELLNGSPLFPGENDIEQLAIVFRTLGTPNEETWPGLTSLPDYNKI 237 (286)
T ss_pred ccccCcccccCceeeeccccCCchhHHHHHHHHHHHHHcCCcCcCCCCHHHHHHHHHHHcCCCChHHHhhccCcchhhcc
Confidence 2446899999999987644 689999999999999999999888766654433222110000
Q ss_pred ----------ccCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHh
Q 003963 725 ----------LEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYF 768 (783)
Q Consensus 725 ----------~~~~~~~s~~l~~LI~~cL~~dP~~RPsa~ell~~L~~L~~~~f 768 (783)
..+...++..+.+||.+||..+|.+||++.++ +.|+||
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~------l~h~~~ 285 (286)
T cd07832 238 TFPESKPIPLEEIFPDASPEALDLLKGLLVYDPSKRLSAAEA------LRHPYF 285 (286)
T ss_pred cCCCCCcchHHHhCCCccHHHHHHHHHHhccChhhCCCHHHH------hhCcCc
Confidence 01123467899999999999999999999999 677876
No 242
>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l
Probab=100.00 E-value=2.1e-36 Score=320.78 Aligned_cols=249 Identities=31% Similarity=0.574 Sum_probs=206.5
Q ss_pred eeeccCCcEEEEEEEEeCC-c--eEEEEEEecccCCHHHHHHHHHHHHHHHhC-CCCceeeEeceeecCCceEEEEEecC
Q 003963 511 EQIGQGSCGTVYHAVWYGS-Q--DVAVKVFSRQEYSDEVIHSFRQEVSLMKRL-RHPNVLLFMGAVTSPQRLCIVTEFLP 586 (783)
Q Consensus 511 ~~LG~G~fG~Vy~a~~~~~-~--~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l-~HpnIv~l~~~~~~~~~~~lV~E~~~ 586 (783)
+.||+|+||.||+|.+..+ . .+++|.+.... .......+.+|+.++..+ +||||+++++++...+.+++||||++
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~~~-~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~ 79 (270)
T cd05047 1 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYA-SKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAP 79 (270)
T ss_pred CcCCCCCCceEEEEEEcCCCCeeEEEEEEccccC-CHHHHHHHHHHHHHHHhhccCCCeeeEEEEEecCCCceEEEEeCC
Confidence 3689999999999997654 2 46888876432 334456788999999999 79999999999999999999999999
Q ss_pred CCCHHHHHhhcC---------------CcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecC
Q 003963 587 RGSLFRLLQRNT---------------TKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFG 651 (783)
Q Consensus 587 ggsL~~~L~~~~---------------~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFG 651 (783)
+++|.+++.... ..+++..++.++.|++.||+|||+++ ++|+||||+|||++.++.+||+|||
T Consensus 80 ~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH~~~--i~H~dikp~nili~~~~~~kl~dfg 157 (270)
T cd05047 80 HGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQ--FIHRDLAARNILVGENYVAKIADFG 157 (270)
T ss_pred CCcHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHHHCC--EeecccccceEEEcCCCeEEECCCC
Confidence 999999996532 24788999999999999999999988 9999999999999999999999999
Q ss_pred CCcccccccccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCChHHHHHHhhcccccccCCCC
Q 003963 652 LSRLKHETYLTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELAT-EKIPWDNLNSMQVIGAVGFMNQRLEIPKD 730 (783)
Q Consensus 652 la~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~ 730 (783)
++...... ........+..|+|||++.+..++.++|||||||++|+|++ |..||...+.......+.. ......+..
T Consensus 158 l~~~~~~~-~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~~~~~~~~-~~~~~~~~~ 235 (270)
T cd05047 158 LSRGQEVY-VKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQ-GYRLEKPLN 235 (270)
T ss_pred Cccccchh-hhccCCCCccccCChHHHccCCCCchhhHHHHHHHHHHHHcCCCCCccccCHHHHHHHHhC-CCCCCCCCc
Confidence 98633221 11112234567999999998889999999999999999997 9999988776665555432 234456667
Q ss_pred CCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHH
Q 003963 731 VDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQ 764 (783)
Q Consensus 731 ~s~~l~~LI~~cL~~dP~~RPsa~ell~~L~~L~ 764 (783)
++.++.+|+.+||..+|.+||++.+++..|+++.
T Consensus 236 ~~~~~~~li~~~l~~~p~~Rps~~~il~~l~~~~ 269 (270)
T cd05047 236 CDDEVYDLMRQCWREKPYERPSFAQILVSLNRML 269 (270)
T ss_pred CCHHHHHHHHHHcccChhhCCCHHHHHHHHHHhh
Confidence 8899999999999999999999999999998764
No 243
>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with
Probab=100.00 E-value=1.6e-36 Score=317.74 Aligned_cols=248 Identities=27% Similarity=0.447 Sum_probs=213.2
Q ss_pred ceeEeeeeccCCcEEEEEEEEeC-CceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEeceeecCCceEEEEEe
Q 003963 506 DLTIGEQIGQGSCGTVYHAVWYG-SQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIVTEF 584 (783)
Q Consensus 506 ~y~i~~~LG~G~fG~Vy~a~~~~-~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lV~E~ 584 (783)
+|++.+.||+|+||.||++.+.. ++.+|+|.+............+.+|+.+++.++||||+++++.+...+.+++||||
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~ 80 (256)
T cd08220 1 KYEKIRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQMTKDERLAAQNECQVLKLLSHPNIIEYYENFLEDKALMIVMEY 80 (256)
T ss_pred CceEEEEecccCceEEEEEEEcCCCcEEEEEEEeccccccHHHHHHHHHHHHHhhCCCCchhheeeeEecCCEEEEEEec
Confidence 58899999999999999998754 56799999987666666678899999999999999999999999999999999999
Q ss_pred cCCCCHHHHHhhc-CCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCC-CcEEEEecCCCccccccccc
Q 003963 585 LPRGSLFRLLQRN-TTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKH-WTVKVGDFGLSRLKHETYLT 662 (783)
Q Consensus 585 ~~ggsL~~~L~~~-~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~-~~vkL~DFGla~~~~~~~~~ 662 (783)
+++++|.+++... ...+++..++.++.+++.+|+|||+++ |+|+||||+||+++.+ +.++|+|||++....... .
T Consensus 81 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~--i~h~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~-~ 157 (256)
T cd08220 81 APGGTLAEYIQKRCNSLLDEDTILHFFVQILLALHHVHTKL--ILHRDLKTQNILLDKHKMVVKIGDFGISKILSSKS-K 157 (256)
T ss_pred CCCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCC--eecCCCCHHHEEEcCCCCEEEEccCCCceecCCCc-c
Confidence 9999999999764 345889999999999999999999998 9999999999999855 468999999987655432 2
Q ss_pred ccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhcccccccCCCCCCHHHHHHHHHh
Q 003963 663 TKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAAIVESC 742 (783)
Q Consensus 663 ~~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~l~~LI~~c 742 (783)
.....|+..|+|||.+.+..++.++||||||+++|+|++|+.||...+.......+. ......++..+++++.++|.+|
T Consensus 158 ~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~li~~~ 236 (256)
T cd08220 158 AYTVVGTPCYISPELCEGKPYNQKSDIWALGCVLYELASLKRAFEAANLPALVLKIM-SGTFAPISDRYSPDLRQLILSM 236 (256)
T ss_pred ccccccCCcccCchhccCCCCCcccchHHHHHHHHHHHhCCCCcccCchHHHHHHHH-hcCCCCCCCCcCHHHHHHHHHH
Confidence 224567899999999998888999999999999999999999998877655544442 2223456677899999999999
Q ss_pred hhhCCCCCCCHHHHH
Q 003963 743 WHSDPQCRPSFQELV 757 (783)
Q Consensus 743 L~~dP~~RPsa~ell 757 (783)
|..+|.+|||+.+++
T Consensus 237 l~~~p~~Rpt~~~ll 251 (256)
T cd08220 237 LNLDPSKRPQLSQIM 251 (256)
T ss_pred ccCChhhCCCHHHHh
Confidence 999999999999994
No 244
>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron. Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca
Probab=100.00 E-value=2.5e-36 Score=317.92 Aligned_cols=250 Identities=33% Similarity=0.563 Sum_probs=204.6
Q ss_pred eeeccCCcEEEEEEEEeC----CceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEeceee-cCCceEEEEEec
Q 003963 511 EQIGQGSCGTVYHAVWYG----SQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVT-SPQRLCIVTEFL 585 (783)
Q Consensus 511 ~~LG~G~fG~Vy~a~~~~----~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~-~~~~~~lV~E~~ 585 (783)
+.||+|+||.||+|.+.. ...||||.+.... .......+.+|+.+++.++||||+++++++. .++..+++|||+
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~-~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~~ 79 (262)
T cd05058 1 RVIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRIT-DLEEVEQFLKEGIIMKDFSHPNVLSLLGICLPSEGSPLVVLPYM 79 (262)
T ss_pred CcccccCCceEEEEEEecCCCceEEEEEEecCccC-CHHHHHHHHHHHHHHccCCCCCcceEEEEeecCCCCcEEEEecC
Confidence 368999999999998643 2469999875432 3344567889999999999999999999765 456689999999
Q ss_pred CCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCccccccc----c
Q 003963 586 PRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETY----L 661 (783)
Q Consensus 586 ~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~----~ 661 (783)
.+++|.+++......+++..+..++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+++...... .
T Consensus 80 ~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~--i~H~dlk~~nili~~~~~~kl~dfg~~~~~~~~~~~~~~ 157 (262)
T cd05058 80 KHGDLRNFIRSETHNPTVKDLIGFGLQVAKGMEYLASKK--FVHRDLAARNCMLDESFTVKVADFGLARDIYDKEYYSVH 157 (262)
T ss_pred CCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCC--ccccccCcceEEEcCCCcEEECCccccccccCCcceeec
Confidence 999999999876556778888899999999999999988 9999999999999999999999999987543211 1
Q ss_pred cccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCChHHHHHHhhcccccccCCCCCCHHHHHHHH
Q 003963 662 TTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELAT-EKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAAIVE 740 (783)
Q Consensus 662 ~~~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~l~~LI~ 740 (783)
......++..|+|||.+.+..++.++|||||||++|||++ |.+||...+.......+. .......+..+++.+.+++.
T Consensus 158 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~li~ 236 (262)
T cd05058 158 NHTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVDSFDITVYLL-QGRRLLQPEYCPDPLYEVML 236 (262)
T ss_pred ccccCcCCccccChhHhccCccchHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHh-cCCCCCCCCcCCHHHHHHHH
Confidence 1112345778999999998889999999999999999999 577787776665554442 22334456667899999999
Q ss_pred HhhhhCCCCCCCHHHHHHHHHHHH
Q 003963 741 SCWHSDPQCRPSFQELVDKLRDLQ 764 (783)
Q Consensus 741 ~cL~~dP~~RPsa~ell~~L~~L~ 764 (783)
+||..+|++||++.++++.|+++.
T Consensus 237 ~cl~~~p~~Rp~~~~il~~l~~~~ 260 (262)
T cd05058 237 SCWHPKPEMRPTFSELVSRIEQIF 260 (262)
T ss_pred HHcCCChhhCCCHHHHHHHHHHHh
Confidence 999999999999999999988764
No 245
>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10. Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing
Probab=100.00 E-value=1.1e-36 Score=329.57 Aligned_cols=264 Identities=26% Similarity=0.329 Sum_probs=213.9
Q ss_pred ccceeEeeeeccCCcEEEEEEEEeC-CceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEeceeecC--CceEE
Q 003963 504 WEDLTIGEQIGQGSCGTVYHAVWYG-SQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSP--QRLCI 580 (783)
Q Consensus 504 ~~~y~i~~~LG~G~fG~Vy~a~~~~-~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~--~~~~l 580 (783)
.++|++.+.||.|+||.||+|.+.. ++.||+|++............+.+|+.+++.++|+||+++++++... +.+++
T Consensus 6 ~~~y~~~~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~l 85 (309)
T cd07845 6 VTEFEKLNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNERDGIPISSLREITLLLNLRHPNIVELKEVVVGKHLDSIFL 85 (309)
T ss_pred ccceeEeeeeeecCCEEEEEEEECCCCcEEEEEEEEeccCCCCCcchhhHHHHHHHhCCCCCCcceEEEEecCCCCeEEE
Confidence 4689999999999999999999864 57899999875543333333456799999999999999999998754 46899
Q ss_pred EEEecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCccccccc
Q 003963 581 VTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETY 660 (783)
Q Consensus 581 V~E~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~ 660 (783)
||||+. ++|.+++......+++..++.++.||+.||+|||+.+ ++|+||||+||+++.++.+||+|||++.......
T Consensus 86 v~e~~~-~~l~~~l~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~--i~H~dl~p~nil~~~~~~~kL~dfg~~~~~~~~~ 162 (309)
T cd07845 86 VMEYCE-QDLASLLDNMPTPFSESQVKCLMLQLLRGLQYLHENF--IIHRDLKVSNLLLTDKGCLKIADFGLARTYGLPA 162 (309)
T ss_pred EEecCC-CCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCC--eecCCCCHHHEEECCCCCEEECccceeeecCCcc
Confidence 999996 5899988776667899999999999999999999998 9999999999999999999999999987655432
Q ss_pred ccccCCCCCCcccCcccccC-CCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhcccc----------------
Q 003963 661 LTTKTGKGTPQWMAPEVLRN-EPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQ---------------- 723 (783)
Q Consensus 661 ~~~~~~~Gt~~Y~aPE~~~~-~~~s~~sDIwSLG~il~elltG~~Pf~~~~~~~~~~~i~~~~~---------------- 723 (783)
.......+++.|+|||++.+ ..++.++|||||||++|+|++|.+||...+....+..+.....
T Consensus 163 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (309)
T cd07845 163 KPMTPKVVTLWYRAPELLLGCTTYTTAIDMWAVGCILAELLAHKPLLPGKSEIEQLDLIIQLLGTPNESIWPGFSDLPLV 242 (309)
T ss_pred CCCCcccccccccChhhhcCCCCcCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCChhhchhhhccccc
Confidence 22223345788999999876 4578999999999999999999999988877665544322110
Q ss_pred -cccC-----------CCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhcCcCCCC
Q 003963 724 -RLEI-----------PKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQASRSTVG 776 (783)
Q Consensus 724 -~~~~-----------~~~~s~~l~~LI~~cL~~dP~~RPsa~ell~~L~~L~~~~f~~~~~~~~ 776 (783)
...+ ....++.+.+||.+||..||++|||+.++ +.|+||+...-..+
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~~i------l~h~~f~~~~~~~~ 301 (309)
T cd07845 243 GKFTLPKQPYNNLKHKFPWLSEAGLRLLNFLLMYDPKKRATAEEA------LESSYFKEKPLPCE 301 (309)
T ss_pred ccccccCCCCCchHHhccccCHHHHHHHHHHhcCChhhCcCHHHH------hcChhhccCCCCCC
Confidence 0001 12257889999999999999999999999 67999986655544
No 246
>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=100.00 E-value=5.6e-37 Score=324.05 Aligned_cols=250 Identities=28% Similarity=0.412 Sum_probs=205.8
Q ss_pred ccceeEeeeeccCCcEEEEEEEEeC-CceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEeceeecCCceEEEE
Q 003963 504 WEDLTIGEQIGQGSCGTVYHAVWYG-SQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIVT 582 (783)
Q Consensus 504 ~~~y~i~~~LG~G~fG~Vy~a~~~~-~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lV~ 582 (783)
.++|++.++||+|+||.||+|.+.. ++.||+|++..... .....+.+|+.+++.++||||+++++++...+.+|+||
T Consensus 8 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~--~~~~~~~~e~~~~~~l~h~~ii~~~~~~~~~~~~~lv~ 85 (267)
T cd06645 8 QEDFELIQRIGSGTYGDVYKARNVNTGELAAIKVIKLEPG--EDFAVVQQEIIMMKDCKHSNIVAYFGSYLRRDKLWICM 85 (267)
T ss_pred HHHHHHHHHhCCCCCeEEEEEEEcCCCcEEEEEEEecCch--hHHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEEE
Confidence 3588999999999999999998764 56799999865432 22346778999999999999999999999999999999
Q ss_pred EecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCccccccccc
Q 003963 583 EFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETYLT 662 (783)
Q Consensus 583 E~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~~~ 662 (783)
||+++++|.+++... ..+++..++.++.|++.||.|||+++ |+|+||||+||+++.++.++|+|||++.........
T Consensus 86 e~~~~~~L~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~--i~H~dlkp~nili~~~~~~~l~dfg~~~~~~~~~~~ 162 (267)
T cd06645 86 EFCGGGSLQDIYHVT-GPLSESQIAYVSRETLQGLYYLHSKG--KMHRDIKGANILLTDNGHVKLADFGVSAQITATIAK 162 (267)
T ss_pred eccCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCC--eecCCCCHHHEEECCCCCEEECcceeeeEccCcccc
Confidence 999999999998754 36899999999999999999999998 999999999999999999999999998765443333
Q ss_pred ccCCCCCCcccCccccc---CCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccccccc---CCCCCCHHHH
Q 003963 663 TKTGKGTPQWMAPEVLR---NEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLE---IPKDVDPRWA 736 (783)
Q Consensus 663 ~~~~~Gt~~Y~aPE~~~---~~~~s~~sDIwSLG~il~elltG~~Pf~~~~~~~~~~~i~~~~~~~~---~~~~~s~~l~ 736 (783)
.....|++.|+|||++. ...++.++|+|||||++|+|++|..||.................... ....++..+.
T Consensus 163 ~~~~~~~~~y~aPE~~~~~~~~~~~~~~DvwSlG~il~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (267)
T cd06645 163 RKSFIGTPYWMAPEVAAVERKGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALFLMTKSNFQPPKLKDKMKWSNSFH 242 (267)
T ss_pred cccccCcccccChhhhccccCCCCCchhhhHHHHHHHHHHhcCCCCcccccchhhHHhhhccCCCCCcccccCCCCHHHH
Confidence 34557899999999874 45578899999999999999999999976554433322211111111 1124678999
Q ss_pred HHHHHhhhhCCCCCCCHHHHHH
Q 003963 737 AIVESCWHSDPQCRPSFQELVD 758 (783)
Q Consensus 737 ~LI~~cL~~dP~~RPsa~ell~ 758 (783)
+||.+||..+|++||++.++++
T Consensus 243 ~li~~~l~~~P~~R~~~~~ll~ 264 (267)
T cd06645 243 HFVKMALTKNPKKRPTAEKLLQ 264 (267)
T ss_pred HHHHHHccCCchhCcCHHHHhc
Confidence 9999999999999999999953
No 247
>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter
Probab=100.00 E-value=1.4e-36 Score=323.29 Aligned_cols=256 Identities=30% Similarity=0.530 Sum_probs=216.4
Q ss_pred cceeEeeeeccCCcEEEEEEEEeC-CceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEeceeecCCceEEEEE
Q 003963 505 EDLTIGEQIGQGSCGTVYHAVWYG-SQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIVTE 583 (783)
Q Consensus 505 ~~y~i~~~LG~G~fG~Vy~a~~~~-~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lV~E 583 (783)
..|+..++||.|+||.||+|.+.. +..||||++..... ......+.+|+.+++.+.||||+++++++..+..+|+|||
T Consensus 4 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 82 (277)
T cd06640 4 ELFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEA-EDEIEDIQQEITVLSQCDSPYVTKYYGSYLKGTKLWIIME 82 (277)
T ss_pred HhhhhhhhcccCCCeEEEEEEEccCCEEEEEEEEecccc-HHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEEe
Confidence 457888999999999999999764 57899999875433 3445788899999999999999999999999999999999
Q ss_pred ecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCcccccccccc
Q 003963 584 FLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETYLTT 663 (783)
Q Consensus 584 ~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~~~~ 663 (783)
|+++++|.+++.. .++++..+..++.|++.||.|||+.+ ++|+||+|+||+++.++.++|+|||++..........
T Consensus 83 ~~~~~~L~~~i~~--~~l~~~~~~~~~~~l~~~l~~lh~~~--ivH~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~~~ 158 (277)
T cd06640 83 YLGGGSALDLLRA--GPFDEFQIATMLKEILKGLDYLHSEK--KIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKR 158 (277)
T ss_pred cCCCCcHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCC--ccCcCCChhhEEEcCCCCEEEcccccceeccCCcccc
Confidence 9999999999875 35888899999999999999999988 9999999999999999999999999987654433233
Q ss_pred cCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhcccccccCCCCCCHHHHHHHHHhh
Q 003963 664 KTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAAIVESCW 743 (783)
Q Consensus 664 ~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~l~~LI~~cL 743 (783)
....++..|+|||.+.+..++.++|+|||||++|+|++|..||...........+. ......++..++..+.+||.+||
T Consensus 159 ~~~~~~~~y~apE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~li~~~l 237 (277)
T cd06640 159 NTFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDMHPMRVLFLIP-KNNPPTLTGEFSKPFKEFIDACL 237 (277)
T ss_pred ccccCcccccCHhHhccCCCccHHHHHHHHHHHHHHHHCCCCCCCcChHhHhhhhh-cCCCCCCchhhhHHHHHHHHHHc
Confidence 34467889999999998889999999999999999999999998777665544332 22234455667889999999999
Q ss_pred hhCCCCCCCHHHHHHHHHHHHHHHhhcCc
Q 003963 744 HSDPQCRPSFQELVDKLRDLQRQYFQASR 772 (783)
Q Consensus 744 ~~dP~~RPsa~ell~~L~~L~~~~f~~~~ 772 (783)
..+|.+||++.++ ++++||....
T Consensus 238 ~~~p~~Rp~~~~i------l~~~~~~~~~ 260 (277)
T cd06640 238 NKDPSFRPTAKEL------LKHKFIVKNA 260 (277)
T ss_pred ccCcccCcCHHHH------HhChHhhhcc
Confidence 9999999999999 5677775543
No 248
>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p
Probab=100.00 E-value=9.9e-37 Score=331.00 Aligned_cols=246 Identities=24% Similarity=0.369 Sum_probs=190.1
Q ss_pred eeeeccCCcEEEEEEEEeC---CceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEeceeec--CCceEEEEEe
Q 003963 510 GEQIGQGSCGTVYHAVWYG---SQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTS--PQRLCIVTEF 584 (783)
Q Consensus 510 ~~~LG~G~fG~Vy~a~~~~---~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~--~~~~~lV~E~ 584 (783)
+++||+|+||.||+|.+.. .+.||+|++...... ..+.+|+.+++.++||||+++++++.. ...+|++|||
T Consensus 6 ~~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~~~~----~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~ 81 (317)
T cd07868 6 GCKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGTGIS----MSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDY 81 (317)
T ss_pred ccccccCCCeEEEEEEEccCCCCceEEEEEECCCCCc----HHHHHHHHHHHhcCCCCCcceeeeEecCCCcEEEEEEec
Confidence 4689999999999998753 467999998765433 346689999999999999999998854 4568999999
Q ss_pred cCCCCHHHHHhhc--------CCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEE----cCCCcEEEEecCC
Q 003963 585 LPRGSLFRLLQRN--------TTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLV----DKHWTVKVGDFGL 652 (783)
Q Consensus 585 ~~ggsL~~~L~~~--------~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl----~~~~~vkL~DFGl 652 (783)
+. ++|.+++... ...+++..++.++.||+.||.|||+++ |+||||||+|||+ +..+.+||+|||+
T Consensus 82 ~~-~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~--ivHrDlkp~Nil~~~~~~~~~~~kl~DfG~ 158 (317)
T cd07868 82 AE-HDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANW--VLHRDLKPANILVMGEGPERGRVKIADMGF 158 (317)
T ss_pred cC-CCHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHHhCC--EEcCCCCHHHEEEecCCCCcCcEEEeecCc
Confidence 95 5888887532 235889999999999999999999998 9999999999999 4567899999999
Q ss_pred Cccccccc---ccccCCCCCCcccCcccccCC-CCCchhHHHHHHHHHHHHHcCCCCCCCCChH---------HHHHHhh
Q 003963 653 SRLKHETY---LTTKTGKGTPQWMAPEVLRNE-PSDEKSDVYSFGVILWELATEKIPWDNLNSM---------QVIGAVG 719 (783)
Q Consensus 653 a~~~~~~~---~~~~~~~Gt~~Y~aPE~~~~~-~~s~~sDIwSLG~il~elltG~~Pf~~~~~~---------~~~~~i~ 719 (783)
+....... .......||+.|+|||++.+. .++.++|||||||++|+|++|++||...... ..+..+.
T Consensus 159 a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~~~~~~~~~~~~~~~~~~~ 238 (317)
T cd07868 159 ARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIF 238 (317)
T ss_pred eeccCCCCccccccCCccccccccCCHHHcCCCCcCchhhHHHHHHHHHHHHhCCCCccCCcccccccccccHHHHHHHH
Confidence 97654322 122345789999999998874 5789999999999999999999999643210 1111100
Q ss_pred c-ccc-------------------------cc----------cCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHH
Q 003963 720 F-MNQ-------------------------RL----------EIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDL 763 (783)
Q Consensus 720 ~-~~~-------------------------~~----------~~~~~~s~~l~~LI~~cL~~dP~~RPsa~ell~~L~~L 763 (783)
. ... .. ......+.++.+||.+||+.||.+|||+.++ |
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~R~t~~e~------l 312 (317)
T cd07868 239 NVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQA------M 312 (317)
T ss_pred HhcCCCChHHhHHHhhccchhhhhhhhhccccCcccccchHHhcCCCCChHHHHHHHHHhccCcccCCCHHHH------h
Confidence 0 000 00 0011235678999999999999999999999 6
Q ss_pred HHHHh
Q 003963 764 QRQYF 768 (783)
Q Consensus 764 ~~~~f 768 (783)
+|+||
T Consensus 313 ~hp~f 317 (317)
T cd07868 313 QDPYF 317 (317)
T ss_pred cCCCC
Confidence 77876
No 249
>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.1e-38 Score=366.21 Aligned_cols=259 Identities=24% Similarity=0.398 Sum_probs=228.0
Q ss_pred ccccceeEeeeeccCCcEEEEEEEEeCC-ceEEEEEEecccCC-HHHHHHHHHHHHHHHhCCCCceeeEeceeecCCceE
Q 003963 502 ILWEDLTIGEQIGQGSCGTVYHAVWYGS-QDVAVKVFSRQEYS-DEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLC 579 (783)
Q Consensus 502 ~~~~~y~i~~~LG~G~fG~Vy~a~~~~~-~~vAiK~i~~~~~~-~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~ 579 (783)
+..++|.|+++||+|+||.|.+++++.. +.||+|++.+.... .....-|+.|-.+|-..+.+=||+++..|+++.++|
T Consensus 72 l~~~DfeilKvIGrGaFGEV~lVr~k~t~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~ns~Wiv~LhyAFQD~~~LY 151 (1317)
T KOG0612|consen 72 LKAEDFEILKVIGRGAFGEVALVRHKSTEKVYAMKILNKWEMLKRAETACFREERDIMVFGNSEWIVQLHYAFQDERYLY 151 (1317)
T ss_pred CCHHhhHHHHHhcccccceeEEEEeeccccchhHHHhhHHHHhhchhHHHHHHHhHHHHcCCcHHHHHHHHHhcCccceE
Confidence 3467999999999999999999998775 56999999875433 234467889999999999999999999999999999
Q ss_pred EEEEecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCcccc-c
Q 003963 580 IVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKH-E 658 (783)
Q Consensus 580 lV~E~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~-~ 658 (783)
+||||++||+|..++.+.. ++++..+++++.+|+.||..||+.| +|||||||+|||||..|+|||+|||.+..+. +
T Consensus 152 lVMdY~pGGDlltLlSk~~-~~pE~~ArFY~aEiVlAldslH~mg--yVHRDiKPDNvLld~~GHikLADFGsClkm~~d 228 (1317)
T KOG0612|consen 152 LVMDYMPGGDLLTLLSKFD-RLPEDWARFYTAEIVLALDSLHSMG--YVHRDIKPDNVLLDKSGHIKLADFGSCLKMDAD 228 (1317)
T ss_pred EEEecccCchHHHHHhhcC-CChHHHHHHHHHHHHHHHHHHHhcc--ceeccCCcceeEecccCcEeeccchhHHhcCCC
Confidence 9999999999999998876 8999999999999999999999999 9999999999999999999999999887665 5
Q ss_pred ccccccCCCCCCcccCccccc----C-CCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhcccccccCC--CCC
Q 003963 659 TYLTTKTGKGTPQWMAPEVLR----N-EPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLEIP--KDV 731 (783)
Q Consensus 659 ~~~~~~~~~Gt~~Y~aPE~~~----~-~~~s~~sDIwSLG~il~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~~--~~~ 731 (783)
+...+...+|||.|.+||++. + +.|+.-.|+|||||++|||+.|..||...+..+.+..|......+.+| ..+
T Consensus 229 G~V~s~~aVGTPDYISPEvLqs~~~~~g~yG~ecDwWSlGV~~YEMlyG~TPFYadslveTY~KIm~hk~~l~FP~~~~V 308 (1317)
T KOG0612|consen 229 GTVRSSVAVGTPDYISPEVLQSQGDGKGEYGRECDWWSLGVFMYEMLYGETPFYADSLVETYGKIMNHKESLSFPDETDV 308 (1317)
T ss_pred CcEEeccccCCCCccCHHHHHhhcCCccccCCccchhhhHHHHHHHHcCCCcchHHHHHHHHHHHhchhhhcCCCccccc
Confidence 556677789999999999986 3 567899999999999999999999999999999998887776677777 568
Q ss_pred CHHHHHHHHHhhhhCCCCCCC---HHHHHHHHHHHHHHHhhc
Q 003963 732 DPRWAAIVESCWHSDPQCRPS---FQELVDKLRDLQRQYFQA 770 (783)
Q Consensus 732 s~~l~~LI~~cL~~dP~~RPs---a~ell~~L~~L~~~~f~~ 770 (783)
|.++++||++.+. +|+.|.. +.++ -.|+||..
T Consensus 309 SeeakdLI~~ll~-~~e~RLgrngiedi------k~HpFF~g 343 (1317)
T KOG0612|consen 309 SEEAKDLIEALLC-DREVRLGRNGIEDI------KNHPFFEG 343 (1317)
T ss_pred CHHHHHHHHHHhc-ChhhhcccccHHHH------HhCccccC
Confidence 9999999999774 5777776 8888 57899943
No 250
>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is
Probab=100.00 E-value=1.6e-36 Score=326.01 Aligned_cols=261 Identities=23% Similarity=0.309 Sum_probs=214.3
Q ss_pred ceeEeeeeccCCcEEEEEEEEeC-CceEEEEEEecccCC---HHHHHHHHHHHHHHHhCCCCceeeEeceeecCCceEEE
Q 003963 506 DLTIGEQIGQGSCGTVYHAVWYG-SQDVAVKVFSRQEYS---DEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIV 581 (783)
Q Consensus 506 ~y~i~~~LG~G~fG~Vy~a~~~~-~~~vAiK~i~~~~~~---~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lV 581 (783)
+|++.+.||.|+||.||+|.+.. ++.|+||++...... ......+..|+.+++.++|+||+++++++...+..++|
T Consensus 1 ~y~~~~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv 80 (298)
T cd07841 1 RYEKGKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKHPNIIGLLDVFGHKSNINLV 80 (298)
T ss_pred CceeeeeeeeccccEEEEEEECCCCcEEEEEEEeccccccccchhhHHHHHHHHHHhhcCCCCChhhhheeecCCEEEEE
Confidence 48889999999999999999764 578999999766544 33445677899999999999999999999999999999
Q ss_pred EEecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCcccccccc
Q 003963 582 TEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETYL 661 (783)
Q Consensus 582 ~E~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~~ 661 (783)
|||+ +++|.+++......+++..++.++.||++||.|||+++ |+|+||||+|||++.++.++|+|||++........
T Consensus 81 ~e~~-~~~L~~~i~~~~~~~~~~~~~~~~~qi~~al~~lH~~~--i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~~~ 157 (298)
T cd07841 81 FEFM-ETDLEKVIKDKSIVLTPADIKSYMLMTLRGLEYLHSNW--ILHRDLKPNNLLIASDGVLKLADFGLARSFGSPNR 157 (298)
T ss_pred Eccc-CCCHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCC--eeecCCChhhEEEcCCCCEEEccceeeeeccCCCc
Confidence 9999 88999999765546899999999999999999999998 99999999999999999999999999976654433
Q ss_pred cccCCCCCCcccCcccccC-CCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhcccc-----------------
Q 003963 662 TTKTGKGTPQWMAPEVLRN-EPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQ----------------- 723 (783)
Q Consensus 662 ~~~~~~Gt~~Y~aPE~~~~-~~~s~~sDIwSLG~il~elltG~~Pf~~~~~~~~~~~i~~~~~----------------- 723 (783)
......+++.|+|||.+.+ ..++.++|||||||++|+|++|.+||........+..+.....
T Consensus 158 ~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~e~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (298)
T cd07841 158 KMTHQVVTRWYRAPELLFGARHYGVGVDMWSVGCIFAELLLRVPFLPGDSDIDQLGKIFEALGTPTEENWPGVTSLPDYV 237 (298)
T ss_pred cccccccceeeeCHHHHhCCCCCCcHHHHHHHHHHHHHHHcCCccccCCccHHHHHHHHHHcCCCchhhhhhcccccccc
Confidence 3333456888999998865 4578999999999999999999888876665443322211000
Q ss_pred ---------cccCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhcCcCCC
Q 003963 724 ---------RLEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQASRSTV 775 (783)
Q Consensus 724 ---------~~~~~~~~s~~l~~LI~~cL~~dP~~RPsa~ell~~L~~L~~~~f~~~~~~~ 775 (783)
.......++..+.+||.+||.++|.+||++.++ +.++||++...-.
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~e~------l~~~~~~~~~~~~ 292 (298)
T cd07841 238 EFKPFPPTPLKQIFPAASDDALDLLQRLLTLNPNKRITARQA------LEHPYFSNDPAPT 292 (298)
T ss_pred cccccCCcchhhhcccccHHHHHHHHHHhcCCcccCcCHHHH------hhCccccCCCCCC
Confidence 000123457889999999999999999999999 6799998866543
No 251
>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase. Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina
Probab=100.00 E-value=2.8e-36 Score=319.13 Aligned_cols=255 Identities=30% Similarity=0.497 Sum_probs=207.8
Q ss_pred ccceeEeeeeccCCcEEEEEEEEeC-CceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEeceeecCCceEEEE
Q 003963 504 WEDLTIGEQIGQGSCGTVYHAVWYG-SQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIVT 582 (783)
Q Consensus 504 ~~~y~i~~~LG~G~fG~Vy~a~~~~-~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lV~ 582 (783)
.+++.....||+|+||.||+|.+.. +..|++|.+.... ....+.+.+|+.+++.++|+||+++++++..++..+++|
T Consensus 7 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~~--~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 84 (268)
T cd06624 7 YDENGERVVLGKGTYGIVYAARDLSTQVRIAIKEIPERD--SRYVQPLHEEIALHSYLKHRNIVQYLGSDSENGFFKIFM 84 (268)
T ss_pred cccCCceEEEecCCceEEEEeEecCCCcEEEEEEecCCC--HHHHHHHHHHHHHHHhcCCCCeeeeeeeeccCCEEEEEE
Confidence 3444455689999999999999765 4579999876543 334567889999999999999999999999999999999
Q ss_pred EecCCCCHHHHHhhcCCcc--hHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcC-CCcEEEEecCCCcccccc
Q 003963 583 EFLPRGSLFRLLQRNTTKL--DWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDK-HWTVKVGDFGLSRLKHET 659 (783)
Q Consensus 583 E~~~ggsL~~~L~~~~~~l--~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~-~~~vkL~DFGla~~~~~~ 659 (783)
||+++++|.+++......+ +...+..++.||+.||+|||+.+ |+|+||||+||+++. .+.++|+|||++......
T Consensus 85 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~--i~h~dl~p~nil~~~~~~~~~l~dfg~~~~~~~~ 162 (268)
T cd06624 85 EQVPGGSLSALLRSKWGPLKDNEQTIIFYTKQILEGLKYLHDNQ--IVHRDIKGDNVLVNTYSGVVKISDFGTSKRLAGI 162 (268)
T ss_pred ecCCCCCHHHHHHHhcccCCCcHHHHHHHHHHHHHHHHHHHHCC--EeecCCCHHHEEEcCCCCeEEEecchhheecccC
Confidence 9999999999997654445 78888899999999999999988 999999999999976 679999999998755433
Q ss_pred cccccCCCCCCcccCcccccCCC--CCchhHHHHHHHHHHHHHcCCCCCCCCChHH-HHHHhhcccccccCCCCCCHHHH
Q 003963 660 YLTTKTGKGTPQWMAPEVLRNEP--SDEKSDVYSFGVILWELATEKIPWDNLNSMQ-VIGAVGFMNQRLEIPKDVDPRWA 736 (783)
Q Consensus 660 ~~~~~~~~Gt~~Y~aPE~~~~~~--~s~~sDIwSLG~il~elltG~~Pf~~~~~~~-~~~~i~~~~~~~~~~~~~s~~l~ 736 (783)
........|++.|+|||.+.+.. ++.++||||||+++|+|++|..||....... .............++..+++++.
T Consensus 163 ~~~~~~~~~~~~~~aPE~~~~~~~~~~~~~Dv~slGvvl~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (268)
T cd06624 163 NPCTETFTGTLQYMAPEVIDKGPRGYGAPADIWSLGCTIVEMATGKPPFIELGEPQAAMFKVGMFKIHPEIPESLSAEAK 242 (268)
T ss_pred CCccccCCCCccccChhhhccccccCCchhhhHHHHHHHHHHHhCCCCCccccChhhhHhhhhhhccCCCCCcccCHHHH
Confidence 22233445789999999986644 7889999999999999999999997654322 22222222334557778899999
Q ss_pred HHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHh
Q 003963 737 AIVESCWHSDPQCRPSFQELVDKLRDLQRQYF 768 (783)
Q Consensus 737 ~LI~~cL~~dP~~RPsa~ell~~L~~L~~~~f 768 (783)
+|+.+||..+|.+||++.++ +.|+||
T Consensus 243 ~li~~~l~~~p~~Rpt~~~l------l~~~~~ 268 (268)
T cd06624 243 NFILRCFEPDPDKRASAHDL------LQDPFL 268 (268)
T ss_pred HHHHHHcCCCchhCCCHHHH------HhCCCC
Confidence 99999999999999999999 566765
No 252
>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin. Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear
Probab=100.00 E-value=1.9e-36 Score=323.22 Aligned_cols=253 Identities=28% Similarity=0.426 Sum_probs=205.0
Q ss_pred cccccceeEeeeeccCCcEEEEEEEEeC-CceEEEEEEecccCCHHHHHHHHHHHHHHHhC-CCCceeeEeceee-----
Q 003963 501 EILWEDLTIGEQIGQGSCGTVYHAVWYG-SQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRL-RHPNVLLFMGAVT----- 573 (783)
Q Consensus 501 e~~~~~y~i~~~LG~G~fG~Vy~a~~~~-~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l-~HpnIv~l~~~~~----- 573 (783)
....++|++.+.||+|+||.||++.+.. ++.+|+|++..... ....+.+|+.+++.+ +||||+++++++.
T Consensus 14 ~~~~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~---~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~ 90 (286)
T cd06638 14 PDPSDTWEIIETIGKGTYGKVFKVLNKKNGSKAAVKILDPIHD---IDEEIEAEYNILKALSDHPNVVKFYGMYYKKDVK 90 (286)
T ss_pred CCcccceeeeeeeccCCCcEEEEEEECCCCceeEEEeeccccc---hHHHHHHHHHHHHHHhcCCCeeeeeeeeeecccC
Confidence 3456899999999999999999998754 46799998754322 224677899999999 6999999999873
Q ss_pred cCCceEEEEEecCCCCHHHHHhh---cCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEec
Q 003963 574 SPQRLCIVTEFLPRGSLFRLLQR---NTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDF 650 (783)
Q Consensus 574 ~~~~~~lV~E~~~ggsL~~~L~~---~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DF 650 (783)
....+++||||+++++|.+++.. ....+++..++.++.|++.||.|||+++ |+||||||+||+++.++.++|+||
T Consensus 91 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~--i~H~dlkp~nili~~~~~~kl~df 168 (286)
T cd06638 91 NGDQLWLVLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQHLHVNK--TIHRDVKGNNILLTTEGGVKLVDF 168 (286)
T ss_pred CCCeEEEEEeecCCCCHHHHHHHhhccCccccHHHHHHHHHHHHHHHHHHHhCC--ccccCCCHHhEEECCCCCEEEccC
Confidence 34568999999999999998753 2346888999999999999999999998 999999999999999999999999
Q ss_pred CCCcccccccccccCCCCCCcccCcccccC-----CCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccc-cc
Q 003963 651 GLSRLKHETYLTTKTGKGTPQWMAPEVLRN-----EPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMN-QR 724 (783)
Q Consensus 651 Gla~~~~~~~~~~~~~~Gt~~Y~aPE~~~~-----~~~s~~sDIwSLG~il~elltG~~Pf~~~~~~~~~~~i~~~~-~~ 724 (783)
|++..............|++.|+|||++.. ..++.++|||||||++|+|++|..||...........+.... ..
T Consensus 169 g~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvi~~el~~g~~p~~~~~~~~~~~~~~~~~~~~ 248 (286)
T cd06638 169 GVSAQLTSTRLRRNTSVGTPFWMAPEVIACEQQLDSTYDARCDVWSLGITAIELGDGDPPLADLHPMRALFKIPRNPPPT 248 (286)
T ss_pred CceeecccCCCccccccCCCcccChhhhchhhhccccccchhhhhhHHHHHHHHhcCCCCCCCCchhHHHhhccccCCCc
Confidence 998765443333334568999999999753 446889999999999999999999998776544433322111 12
Q ss_pred ccCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHH
Q 003963 725 LEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVD 758 (783)
Q Consensus 725 ~~~~~~~s~~l~~LI~~cL~~dP~~RPsa~ell~ 758 (783)
...+..++..+.+||.+||+.||.+||++.++++
T Consensus 249 ~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~ 282 (286)
T cd06638 249 LHQPELWSNEFNDFIRKCLTKDYEKRPTVSDLLQ 282 (286)
T ss_pred ccCCCCcCHHHHHHHHHHccCCcccCCCHHHHhh
Confidence 2344567889999999999999999999999954
No 253
>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th
Probab=100.00 E-value=3.7e-36 Score=320.96 Aligned_cols=255 Identities=33% Similarity=0.543 Sum_probs=205.7
Q ss_pred cceeEeeeeccCCcEEEEEEEEe-----CCceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEeceeec--CCc
Q 003963 505 EDLTIGEQIGQGSCGTVYHAVWY-----GSQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTS--PQR 577 (783)
Q Consensus 505 ~~y~i~~~LG~G~fG~Vy~a~~~-----~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~--~~~ 577 (783)
.+|++.+.||+|+||.||++... .+..||+|++.... ......+.+|+.+++.++||||+++++++.. ...
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~~--~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~ 81 (284)
T cd05081 4 RHLKFIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHST--AEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRN 81 (284)
T ss_pred ccceeeeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccCC--HHHHHHHHHHHHHHHhCCCCCeeEEEEEEccCCCCc
Confidence 57899999999999999999743 35679999986543 3445678899999999999999999998754 346
Q ss_pred eEEEEEecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCcccc
Q 003963 578 LCIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKH 657 (783)
Q Consensus 578 ~~lV~E~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~ 657 (783)
+++||||+++++|.+++......+++..++.++.||+.||+|||+++ |+|+||||+|||++.++.+||+|||++....
T Consensus 82 ~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~l~~aL~~LH~~~--i~H~dlkp~nili~~~~~~~l~dfg~~~~~~ 159 (284)
T cd05081 82 LRLVMEYLPYGSLRDYLQKHRERLDHRKLLLYASQICKGMEYLGSKR--YVHRDLATRNILVESENRVKIGDFGLTKVLP 159 (284)
T ss_pred eEEEEEecCCCCHHHHHHhcCcCCCHHHHHHHHHHHHHHHHHHHHCC--ceeccCCHhhEEECCCCeEEECCCccccccc
Confidence 89999999999999999776667899999999999999999999998 9999999999999999999999999988654
Q ss_pred cccc---cccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHH---------------HHHhh
Q 003963 658 ETYL---TTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQV---------------IGAVG 719 (783)
Q Consensus 658 ~~~~---~~~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~elltG~~Pf~~~~~~~~---------------~~~i~ 719 (783)
.... ......++..|+|||++.+..++.++|||||||++|||++|..|+........ +..+.
T Consensus 160 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (284)
T cd05081 160 QDKEYYKVREPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYSDKSCSPPAEFMRMMGNDKQGQMIVYHLIELL 239 (284)
T ss_pred CCCcceeecCCCCCceEeeCHHHhccCCcChHHHHHHHHHHHHHHhhcCCcCCCcchhhhhhcccccccccchHHHHHHH
Confidence 3221 11122334569999999998899999999999999999998776543221100 00111
Q ss_pred cccccccCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHH
Q 003963 720 FMNQRLEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDL 763 (783)
Q Consensus 720 ~~~~~~~~~~~~s~~l~~LI~~cL~~dP~~RPsa~ell~~L~~L 763 (783)
........+..++.++.+||.+||..+|++|||+.++++.|+.+
T Consensus 240 ~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~~ 283 (284)
T cd05081 240 KNNGRLPAPPGCPAEIYAIMKECWNNDPSQRPSFSELALQVEAI 283 (284)
T ss_pred hcCCcCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHhc
Confidence 11223345567889999999999999999999999999998865
No 254
>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea
Probab=100.00 E-value=1.2e-36 Score=324.43 Aligned_cols=254 Identities=28% Similarity=0.441 Sum_probs=207.0
Q ss_pred ccceeEeeeeccCCcEEEEEEEEeC-CceEEEEEEecccCCHHHHHHHHHHHHHHHhC-CCCceeeEeceeec------C
Q 003963 504 WEDLTIGEQIGQGSCGTVYHAVWYG-SQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRL-RHPNVLLFMGAVTS------P 575 (783)
Q Consensus 504 ~~~y~i~~~LG~G~fG~Vy~a~~~~-~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l-~HpnIv~l~~~~~~------~ 575 (783)
.+.|++.+.||.|+||.||+|.+.. ++.||+|++.... .....+..|+.+++.+ +||||+++++++.. .
T Consensus 15 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~~---~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~ 91 (282)
T cd06636 15 AGIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTE---DEEEEIKLEINMLKKYSHHRNIATYYGAFIKKSPPGHD 91 (282)
T ss_pred hhhhhhheeeccCCCeEEEEEEEcCCCcEEEEEEEecCh---HHHHHHHHHHHHHHHhcCCCcEEEEeeehhcccccCCC
Confidence 4688999999999999999999854 4679999886532 2335678899999998 69999999998853 4
Q ss_pred CceEEEEEecCCCCHHHHHhhc-CCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCc
Q 003963 576 QRLCIVTEFLPRGSLFRLLQRN-TTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSR 654 (783)
Q Consensus 576 ~~~~lV~E~~~ggsL~~~L~~~-~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~ 654 (783)
..+|++|||+++++|.+++... ...+++..++.++.||+.||.|||+.+ |+|+||||+||+++.++.++|+|||++.
T Consensus 92 ~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~--ivH~dl~~~nili~~~~~~~l~dfg~~~ 169 (282)
T cd06636 92 DQLWLVMEFCGAGSVTDLVKNTKGNALKEDWIAYICREILRGLAHLHAHK--VIHRDIKGQNVLLTENAEVKLVDFGVSA 169 (282)
T ss_pred CEEEEEEEeCCCCcHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHCC--cccCCCCHHHEEECCCCCEEEeeCcchh
Confidence 5789999999999999999753 345788889999999999999999998 9999999999999999999999999987
Q ss_pred ccccccccccCCCCCCcccCccccc-----CCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhcccccccCCC
Q 003963 655 LKHETYLTTKTGKGTPQWMAPEVLR-----NEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLEIPK 729 (783)
Q Consensus 655 ~~~~~~~~~~~~~Gt~~Y~aPE~~~-----~~~~s~~sDIwSLG~il~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~ 729 (783)
.............|++.|+|||++. +..++.++|||||||++|+|++|..||...........+...........
T Consensus 170 ~~~~~~~~~~~~~~~~~y~aPE~l~~~~~~~~~~~~~~DvwslG~~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 249 (282)
T cd06636 170 QLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIEMAEGAPPLCDMHPMRALFLIPRNPPPKLKSK 249 (282)
T ss_pred hhhccccCCCcccccccccCHhhcCcccCcCcCCCcccchhHHHHHHHHHHhCCCCccccCHHhhhhhHhhCCCCCCccc
Confidence 5543333334557899999999876 34578899999999999999999999977665544433322222222344
Q ss_pred CCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHh
Q 003963 730 DVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYF 768 (783)
Q Consensus 730 ~~s~~l~~LI~~cL~~dP~~RPsa~ell~~L~~L~~~~f 768 (783)
.++.++.+||.+||..||.+||++.+| +.|+||
T Consensus 250 ~~~~~~~~li~~cl~~~p~~Rp~~~el------l~~~~~ 282 (282)
T cd06636 250 KWSKKFIDFIEGCLVKNYLSRPSTEQL------LKHPFI 282 (282)
T ss_pred ccCHHHHHHHHHHhCCChhhCcCHHHH------hcCCCC
Confidence 688999999999999999999999999 566665
No 255
>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI
Probab=100.00 E-value=7.7e-37 Score=326.07 Aligned_cols=255 Identities=26% Similarity=0.344 Sum_probs=208.3
Q ss_pred cceeEeeeeccCCcEEEEEEEEeC-CceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEeceeecCCceEEEEE
Q 003963 505 EDLTIGEQIGQGSCGTVYHAVWYG-SQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIVTE 583 (783)
Q Consensus 505 ~~y~i~~~LG~G~fG~Vy~a~~~~-~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lV~E 583 (783)
++|++.++||+|+||.||+|.+.. ++.||+|++............+.+|+.+++.++||||+++++++..++..|+|||
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 80 (286)
T cd07846 1 EKYENLGLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDDKMVKKIAMREIRMLKQLRHENLVNLIEVFRRKKRLYLVFE 80 (286)
T ss_pred CceeEeeeeccCCCeEEEEEEECCCCCEEEEEeHhhccCcchhhHHHHHHHHHHHhcCCcchhhHHHhcccCCeEEEEEe
Confidence 478999999999999999999864 5789999987654444445678889999999999999999999999999999999
Q ss_pred ecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCcccccccccc
Q 003963 584 FLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETYLTT 663 (783)
Q Consensus 584 ~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~~~~ 663 (783)
|+++++|..+... ...+++..++.++.||+.||+|||+.+ |+|+||+|+||+++.++.++|+|||++..........
T Consensus 81 ~~~~~~l~~~~~~-~~~~~~~~~~~~~~~i~~~l~~LH~~~--i~h~~l~p~ni~~~~~~~~~l~dfg~~~~~~~~~~~~ 157 (286)
T cd07846 81 FVDHTVLDDLEKY-PNGLDESRVRKYLFQILRGIEFCHSHN--IIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVY 157 (286)
T ss_pred cCCccHHHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHHHCC--ccccCCCHHHEEECCCCcEEEEeeeeeeeccCCcccc
Confidence 9999888877654 345899999999999999999999998 9999999999999999999999999987654433333
Q ss_pred cCCCCCCcccCcccccCC-CCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhcccc-------------------
Q 003963 664 KTGKGTPQWMAPEVLRNE-PSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQ------------------- 723 (783)
Q Consensus 664 ~~~~Gt~~Y~aPE~~~~~-~~s~~sDIwSLG~il~elltG~~Pf~~~~~~~~~~~i~~~~~------------------- 723 (783)
....++..|+|||++.+. .++.++|||||||++|+|++|.+||...........+.....
T Consensus 158 ~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (286)
T cd07846 158 TDYVATRWYRAPELLVGDTKYGRAVDIWAVGCLVTEMLTGEPLFPGDSDIDQLYHIIKCLGNLIPRHQEIFQKNPLFAGM 237 (286)
T ss_pred CcccceeeccCcHHhccccccCchHhHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHhCCCchhhHHHhccchHhhcc
Confidence 344678899999998763 468899999999999999999999976554332222111000
Q ss_pred ----------cccCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHh
Q 003963 724 ----------RLEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYF 768 (783)
Q Consensus 724 ----------~~~~~~~~s~~l~~LI~~cL~~dP~~RPsa~ell~~L~~L~~~~f 768 (783)
.....+.++..+.+|+.+||..+|.+||++.++ ++|+||
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~i------l~~~~~ 286 (286)
T cd07846 238 RLPEVKEIEPLEKRFPKLSGLVLDLAKQCLRIDPDDRPSSSQL------LHHEFF 286 (286)
T ss_pred ccccccCcchHHHhCCCcCHHHHHHHHHHhcCCcccchhHHHH------hcCCCC
Confidence 001123578899999999999999999999999 667776
No 256
>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of
Probab=100.00 E-value=2.8e-36 Score=317.13 Aligned_cols=256 Identities=30% Similarity=0.475 Sum_probs=218.8
Q ss_pred cceeEeeeeccCCcEEEEEEEEeC-CceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEeceeecCCceEEEEE
Q 003963 505 EDLTIGEQIGQGSCGTVYHAVWYG-SQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIVTE 583 (783)
Q Consensus 505 ~~y~i~~~LG~G~fG~Vy~a~~~~-~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lV~E 583 (783)
.+|++.+.||.|++|.||+|.+.. ++.|++|++...... .....+.+|+.++..++|+||+++++++.....+++|||
T Consensus 1 ~~~~~~~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e 79 (264)
T cd06623 1 SDLERVKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDE-EFRKQLLRELKTLRSCESPYVVKCYGAFYKEGEISIVLE 79 (264)
T ss_pred CcceeeeeeeecCCeEEEEEEEcCCCcEEEEEEeccCcch-HHHHHHHHHHHHHHhcCCCCeeeEEEEEccCCeEEEEEE
Confidence 368899999999999999999875 678999998765433 456788899999999999999999999999999999999
Q ss_pred ecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHh-CCCCEEecCCCCCCEEEcCCCcEEEEecCCCccccccccc
Q 003963 584 FLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHH-CNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETYLT 662 (783)
Q Consensus 584 ~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~-~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~~~ 662 (783)
|+++++|.+++... ..+++..++.++.||+.||.|||+ .+ ++|+||+|+||+++.++.++|+|||++.........
T Consensus 80 ~~~~~~L~~~l~~~-~~l~~~~~~~~~~~l~~~l~~lh~~~~--~~H~~l~~~ni~~~~~~~~~l~df~~~~~~~~~~~~ 156 (264)
T cd06623 80 YMDGGSLADLLKKV-GKIPEPVLAYIARQILKGLDYLHTKRH--IIHRDIKPSNLLINSKGEVKIADFGISKVLENTLDQ 156 (264)
T ss_pred ecCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHhccCC--CccCCCCHHHEEECCCCCEEEccCccceecccCCCc
Confidence 99999999999764 568999999999999999999999 88 999999999999999999999999998766544333
Q ss_pred ccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCC---hHHHHHHhhcccccccCCCC-CCHHHHHH
Q 003963 663 TKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLN---SMQVIGAVGFMNQRLEIPKD-VDPRWAAI 738 (783)
Q Consensus 663 ~~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~elltG~~Pf~~~~---~~~~~~~i~~~~~~~~~~~~-~s~~l~~L 738 (783)
.....++..|+|||.+.+..++.++|+||||+++|+|++|..||.... ..+....+. .......+.. ++..+.++
T Consensus 157 ~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~l 235 (264)
T cd06623 157 CNTFVGTVTYMSPERIQGESYSYAADIWSLGLTLLECALGKFPFLPPGQPSFFELMQAIC-DGPPPSLPAEEFSPEFRDF 235 (264)
T ss_pred ccceeecccccCHhhhCCCCCCchhhHHHHHHHHHHHHhCCCCCccccccCHHHHHHHHh-cCCCCCCCcccCCHHHHHH
Confidence 334467889999999999989999999999999999999999997774 333333332 2233445555 88999999
Q ss_pred HHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhcC
Q 003963 739 VESCWHSDPQCRPSFQELVDKLRDLQRQYFQAS 771 (783)
Q Consensus 739 I~~cL~~dP~~RPsa~ell~~L~~L~~~~f~~~ 771 (783)
|..||..+|++||++.++ +.++|++..
T Consensus 236 i~~~l~~~p~~R~~~~~l------l~~~~~~~~ 262 (264)
T cd06623 236 ISACLQKDPKKRPSAAEL------LQHPFIKKA 262 (264)
T ss_pred HHHHccCChhhCCCHHHH------HhCHHHHhc
Confidence 999999999999999999 667888654
No 257
>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4. Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s
Probab=100.00 E-value=2.5e-36 Score=320.51 Aligned_cols=255 Identities=28% Similarity=0.529 Sum_probs=214.7
Q ss_pred ccceeEeeeeccCCcEEEEEEEEeC------CceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEeceeecCCc
Q 003963 504 WEDLTIGEQIGQGSCGTVYHAVWYG------SQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQR 577 (783)
Q Consensus 504 ~~~y~i~~~LG~G~fG~Vy~a~~~~------~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~ 577 (783)
.++|++.+.||.|+||.||+|..+. .+.|++|.+.... .......+.+|+.+++.++|+||+++++++.....
T Consensus 4 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 82 (275)
T cd05046 4 RSNLQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTK-DENLQSEFRRELDMFRKLSHKNVVRLLGLCREAEP 82 (275)
T ss_pred hHhceeeeeecccceeEEEEEEeccCCcCCCcceEEEEccCCcc-chHHHHHHHHHHHHHHhcCCcceeeeEEEECCCCc
Confidence 3689999999999999999998643 2468999876533 23356778999999999999999999999999899
Q ss_pred eEEEEEecCCCCHHHHHhhcC--------CcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEe
Q 003963 578 LCIVTEFLPRGSLFRLLQRNT--------TKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGD 649 (783)
Q Consensus 578 ~~lV~E~~~ggsL~~~L~~~~--------~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~D 649 (783)
.|+||||+++++|.+++.... ..+++..+..++.||+.||+|||+++ |+|+||||+|||++.++.++|+|
T Consensus 83 ~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~~--i~H~dlkp~Nili~~~~~~~l~~ 160 (275)
T cd05046 83 HYMILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLSNAR--FVHRDLAARNCLVSSQREVKVSL 160 (275)
T ss_pred ceEEEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhhhcC--cccCcCccceEEEeCCCcEEEcc
Confidence 999999999999999997543 15899999999999999999999998 99999999999999999999999
Q ss_pred cCCCcccccc-cccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCChHHHHHHhhcccccccC
Q 003963 650 FGLSRLKHET-YLTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELAT-EKIPWDNLNSMQVIGAVGFMNQRLEI 727 (783)
Q Consensus 650 FGla~~~~~~-~~~~~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~~~ 727 (783)
||++...... ........++..|++||.+.+..++.++|||||||++|+|++ |..||...........+.........
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~~~~~p~~~~~~~~~~~~~~~~~~~~~~ 240 (275)
T cd05046 161 LSLSKDVYNSEYYKLRNALIPLRWLAPEAVQEDDFSTKSDVWSFGVLMWEVFTQGELPFYGLSDEEVLNRLQAGKLELPV 240 (275)
T ss_pred cccccccCcccccccCCceeEEeecChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCccccchHHHHHHHHcCCcCCCC
Confidence 9998643221 112223356778999999988888999999999999999999 89999887776666555433334455
Q ss_pred CCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHH
Q 003963 728 PKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLR 761 (783)
Q Consensus 728 ~~~~s~~l~~LI~~cL~~dP~~RPsa~ell~~L~ 761 (783)
+..++..+.++|.+||..+|.+||++.+++..|.
T Consensus 241 ~~~~~~~l~~~i~~~l~~~p~~Rp~~~~~l~~l~ 274 (275)
T cd05046 241 PEGCPSRLYKLMTRCWAVNPKDRPSFSELVSALG 274 (275)
T ss_pred CCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHhc
Confidence 6678999999999999999999999999998774
No 258
>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase. Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1
Probab=100.00 E-value=1.9e-36 Score=318.95 Aligned_cols=255 Identities=31% Similarity=0.519 Sum_probs=212.8
Q ss_pred cceeEeeeeccCCcEEEEEEEEeC-CceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEeceeecCCceEEEEE
Q 003963 505 EDLTIGEQIGQGSCGTVYHAVWYG-SQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIVTE 583 (783)
Q Consensus 505 ~~y~i~~~LG~G~fG~Vy~a~~~~-~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lV~E 583 (783)
++|++.+.||.|+||.||+|.... +..+++|++....... ....+.+|+.+++.++|+||+++++.+......+++||
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e 79 (267)
T cd06610 1 DDYELIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQT-SVDELRKEVQAMSQCNHPNVVKYYTSFVVGDELWLVMP 79 (267)
T ss_pred CcceeeeeecCCCCeEEEEEEEcCCCcEEEEEEeccCCcch-HHHHHHHHHHHHHhcCCCCEEEEEEEEeeCCEEEEEEe
Confidence 479999999999999999999754 4679999987655444 55778999999999999999999999999999999999
Q ss_pred ecCCCCHHHHHhhc--CCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCcccccccc
Q 003963 584 FLPRGSLFRLLQRN--TTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETYL 661 (783)
Q Consensus 584 ~~~ggsL~~~L~~~--~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~~ 661 (783)
|+++++|.+++... ...+++..+..++.||+.||.|||+.+ |+|+||||+||++++++.++|+|||++........
T Consensus 80 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lh~~~--i~h~~l~p~ni~~~~~~~~~l~df~~~~~~~~~~~ 157 (267)
T cd06610 80 YLSGGSLLDIMKSSYPRGGLDEAIIATVLKEVLKGLEYLHSNG--QIHRDIKAGNILLGEDGSVKIADFGVSASLADGGD 157 (267)
T ss_pred ccCCCcHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCC--eecCCCCHHhEEEcCCCCEEEcccchHHHhccCcc
Confidence 99999999999753 245899999999999999999999998 99999999999999999999999999875544322
Q ss_pred c----ccCCCCCCcccCcccccCC-CCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhcccc-cccC---CCCCC
Q 003963 662 T----TKTGKGTPQWMAPEVLRNE-PSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQ-RLEI---PKDVD 732 (783)
Q Consensus 662 ~----~~~~~Gt~~Y~aPE~~~~~-~~s~~sDIwSLG~il~elltG~~Pf~~~~~~~~~~~i~~~~~-~~~~---~~~~s 732 (783)
. .....|+..|++||++... .++.++|+|||||++|+|++|+.||...+..+.......... .... ...++
T Consensus 158 ~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (267)
T cd06610 158 RTRKVRKTFVGTPCWMAPEVMEQVHGYDFKADIWSFGITAIELATGAAPYSKYPPMKVLMLTLQNDPPSLETGADYKKYS 237 (267)
T ss_pred ccccccccccCChhhcChHHHccccCcCcccchHhHhHHHHHHHhCCCCccccChhhhHHHHhcCCCCCcCCcccccccc
Confidence 1 1334688999999998776 788999999999999999999999988776554443322111 1111 13578
Q ss_pred HHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHh
Q 003963 733 PRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYF 768 (783)
Q Consensus 733 ~~l~~LI~~cL~~dP~~RPsa~ell~~L~~L~~~~f 768 (783)
+.+.+||.+||..||.+||++.++ +.|+||
T Consensus 238 ~~~~~li~~~l~~~p~~Rp~~~~l------l~~p~~ 267 (267)
T cd06610 238 KSFRKMISLCLQKDPSKRPTAEEL------LKHKFF 267 (267)
T ss_pred HHHHHHHHHHcCCChhhCcCHHHH------hhCCCC
Confidence 899999999999999999999999 567776
No 259
>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1. Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.
Probab=100.00 E-value=6.1e-37 Score=322.12 Aligned_cols=251 Identities=24% Similarity=0.360 Sum_probs=214.8
Q ss_pred ceeEeeeeccCCcEEEEEEEEeC-CceEEEEEEecccCCH-HHHHHHHHHHHHHHhCCCCceeeEeceeecCCceEEEEE
Q 003963 506 DLTIGEQIGQGSCGTVYHAVWYG-SQDVAVKVFSRQEYSD-EVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIVTE 583 (783)
Q Consensus 506 ~y~i~~~LG~G~fG~Vy~a~~~~-~~~vAiK~i~~~~~~~-~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lV~E 583 (783)
+|++.+.||.|+||.||+|.+.. ++.|++|++....... ...+.+.+|+.+++.++||||+++++.+.....+++|||
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 80 (258)
T cd05578 1 HFELLRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELNHPFLVNLWYSFQDEENMYLVVD 80 (258)
T ss_pred CceEEEEeccCCCceEEEEEEccCCcEEEEEEEehhhhcchhHHHHHHHHHHHHHhCCCCChHHHHHhhcCCCeEEEEEe
Confidence 58999999999999999999864 5789999998654332 456788999999999999999999999999999999999
Q ss_pred ecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCcccccccccc
Q 003963 584 FLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETYLTT 663 (783)
Q Consensus 584 ~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~~~~ 663 (783)
|+.+++|.+++... .++++..+..++.||++||.|||+++ ++|+||||+||+++.++.++|+|||++....... ..
T Consensus 81 ~~~~~~L~~~l~~~-~~l~~~~~~~~~~~i~~~l~~lh~~~--i~h~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~-~~ 156 (258)
T cd05578 81 LLLGGDLRYHLSQK-VKFSEEQVKFWICEIVLALEYLHSKG--IIHRDIKPDNILLDEQGHVHITDFNIATKVTPDT-LT 156 (258)
T ss_pred CCCCCCHHHHHHhc-CCcCHHHHHHHHHHHHHHHHHHHhCC--eeccCCCHHHeEEcCCCCEEEeecccccccCCCc-cc
Confidence 99999999999765 46899999999999999999999998 9999999999999999999999999987654432 22
Q ss_pred cCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCCh---HHHHHHhhcccccccCCCCCCHHHHHHHH
Q 003963 664 KTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNS---MQVIGAVGFMNQRLEIPKDVDPRWAAIVE 740 (783)
Q Consensus 664 ~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~elltG~~Pf~~~~~---~~~~~~i~~~~~~~~~~~~~s~~l~~LI~ 740 (783)
....|+..|+|||.+.+..++.++|+|||||++|+|++|..||...+. ....... .......+..++..+.++|.
T Consensus 157 ~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~i~ 234 (258)
T cd05578 157 TSTSGTPGYMAPEVLCRQGYSVAVDWWSLGVTAYECLRGKRPYRGHSRTIRDQIRAKQ--ETADVLYPATWSTEAIDAIN 234 (258)
T ss_pred cccCCChhhcCHHHHcccCCCCcccchhhHHHHHHHHhCCCCCCCCCccHHHHHHHHh--ccccccCcccCcHHHHHHHH
Confidence 345678899999999988899999999999999999999999987764 3222222 11456677788999999999
Q ss_pred HhhhhCCCCCCCH--HHHHHHHHHHHHHHh
Q 003963 741 SCWHSDPQCRPSF--QELVDKLRDLQRQYF 768 (783)
Q Consensus 741 ~cL~~dP~~RPsa--~ell~~L~~L~~~~f 768 (783)
+||..||.+||++ .++ +.|+||
T Consensus 235 ~~l~~~p~~R~~~~~~~l------~~~~~~ 258 (258)
T cd05578 235 KLLERDPQKRLGDNLKDL------KNHPYF 258 (258)
T ss_pred HHccCChhHcCCccHHHH------hcCCCC
Confidence 9999999999999 776 455655
No 260
>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi
Probab=100.00 E-value=2.6e-36 Score=318.00 Aligned_cols=248 Identities=24% Similarity=0.396 Sum_probs=214.1
Q ss_pred eccCCcEEEEEEEEeC-CceEEEEEEecccCC-HHHHHHHHHHHHHHHhCCCCceeeEeceeecCCceEEEEEecCCCCH
Q 003963 513 IGQGSCGTVYHAVWYG-SQDVAVKVFSRQEYS-DEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIVTEFLPRGSL 590 (783)
Q Consensus 513 LG~G~fG~Vy~a~~~~-~~~vAiK~i~~~~~~-~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lV~E~~~ggsL 590 (783)
||.|+||.||++.+.. ++.|++|++...... ......+.+|+.+++.++||||+++++++..+..++++|||+++++|
T Consensus 1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (262)
T cd05572 1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEECNHPFIVKLYRTFKDKKYIYMLMEYCLGGEL 80 (262)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEEehhcchhhhHHHHHHHHHHHHHhCCCCCEeeeeeeEEcCCccEEEEecCCCCcH
Confidence 6999999999999864 578999999765443 34557789999999999999999999999999999999999999999
Q ss_pred HHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCcccccccccccCCCCCC
Q 003963 591 FRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETYLTTKTGKGTP 670 (783)
Q Consensus 591 ~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~~Gt~ 670 (783)
.+++.+. ..+++..+..++.||+.||+|||+++ ++|+||||+||+++.++.++|+|||++....... ......|++
T Consensus 81 ~~~l~~~-~~l~~~~~~~~~~~i~~~l~~lH~~~--~~h~dl~~~nilv~~~~~~~l~df~~~~~~~~~~-~~~~~~~~~ 156 (262)
T cd05572 81 WTILRDR-GLFDEYTARFYIACVVLAFEYLHNRG--IIYRDLKPENLLLDSNGYVKLVDFGFAKKLKSGQ-KTWTFCGTP 156 (262)
T ss_pred HHHHhhc-CCCCHHHHHHHHHHHHHHHHHHhhCC--cccCCCCHHHEEEcCCCCEEEeeCCcccccCccc-ccccccCCc
Confidence 9999764 35889999999999999999999988 9999999999999999999999999987665432 223446789
Q ss_pred cccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCC--hHHHHHHhhcccccccCCCCCCHHHHHHHHHhhhhCCC
Q 003963 671 QWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLN--SMQVIGAVGFMNQRLEIPKDVDPRWAAIVESCWHSDPQ 748 (783)
Q Consensus 671 ~Y~aPE~~~~~~~s~~sDIwSLG~il~elltG~~Pf~~~~--~~~~~~~i~~~~~~~~~~~~~s~~l~~LI~~cL~~dP~ 748 (783)
.|++||.+.+..++.++|+|||||++|+|++|..||.... .......+.........|..+++++.++|.+||.++|.
T Consensus 157 ~~~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~ 236 (262)
T cd05572 157 EYVAPEIILNKGYDFSVDYWSLGILLYELLTGRPPFGEDDEDPMEIYNDILKGNGKLEFPNYIDKAAKDLIKQLLRRNPE 236 (262)
T ss_pred CccChhHhcCCCCCChhhhhhhHHHHHHHHhCCCCcCCCCCCHHHHHHHHhccCCCCCCCcccCHHHHHHHHHHccCChh
Confidence 9999999988889999999999999999999999998776 55555554433456667777899999999999999999
Q ss_pred CCCC-----HHHHHHHHHHHHHHHhhc
Q 003963 749 CRPS-----FQELVDKLRDLQRQYFQA 770 (783)
Q Consensus 749 ~RPs-----a~ell~~L~~L~~~~f~~ 770 (783)
+||+ +.++ ++|+||+.
T Consensus 237 ~R~~~~~~~~~~l------~~~~~~~~ 257 (262)
T cd05572 237 ERLGNLKGGIKDI------KKHKWFNG 257 (262)
T ss_pred hCcCCcccCHHHH------hcChhhhC
Confidence 9999 8888 67899975
No 261
>PRK13184 pknD serine/threonine-protein kinase; Reviewed
Probab=100.00 E-value=2.8e-36 Score=358.11 Aligned_cols=258 Identities=24% Similarity=0.332 Sum_probs=209.0
Q ss_pred cceeEeeeeccCCcEEEEEEEEeC-CceEEEEEEecccC-CHHHHHHHHHHHHHHHhCCCCceeeEeceeecCCceEEEE
Q 003963 505 EDLTIGEQIGQGSCGTVYHAVWYG-SQDVAVKVFSRQEY-SDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIVT 582 (783)
Q Consensus 505 ~~y~i~~~LG~G~fG~Vy~a~~~~-~~~vAiK~i~~~~~-~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lV~ 582 (783)
++|++.++||+|+||.||+|.+.. ++.||||++..... .......+.+|+.+++.++||||+++++++...+..|+||
T Consensus 2 grYeIi~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L~HPNIVkl~~v~~d~~~lyLVM 81 (932)
T PRK13184 2 QRYDIIRLIGKGGMGEVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADLIHPGIVPVYSICSDGDPVYYTM 81 (932)
T ss_pred CCeEEEEEEecCCCEEEEEEEECCCCcEEEEEEECcccccCHHHHHHHHHHHHHHHhCCCcCcCeEEEEEeeCCEEEEEE
Confidence 689999999999999999999865 57899999875433 2345567899999999999999999999999999999999
Q ss_pred EecCCCCHHHHHhhc----------CCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCC
Q 003963 583 EFLPRGSLFRLLQRN----------TTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGL 652 (783)
Q Consensus 583 E~~~ggsL~~~L~~~----------~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGl 652 (783)
||++|++|.+++... ....+...++.++.||+.||+|||+++ |+||||||+|||++.++.++|+|||+
T Consensus 82 EY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLHs~G--IIHRDLKPeNILLd~dg~vKLiDFGL 159 (932)
T PRK13184 82 PYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVHSKG--VLHRDLKPDNILLGLFGEVVILDWGA 159 (932)
T ss_pred EcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHHHCC--ccccCCchheEEEcCCCCEEEEecCc
Confidence 999999999998642 123456678889999999999999998 99999999999999999999999999
Q ss_pred Cccccccc------------------ccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHH
Q 003963 653 SRLKHETY------------------LTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQV 714 (783)
Q Consensus 653 a~~~~~~~------------------~~~~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~elltG~~Pf~~~~~~~~ 714 (783)
+....... ......+||+.|+|||++.+..++.++|||||||++|+|++|..||........
T Consensus 160 Ak~i~~~~~~~~~l~~~~~~s~~s~~t~~g~~vGT~~YmAPE~l~g~~~S~kSDIWSLGVILyELLTG~~PF~~~~~~ki 239 (932)
T PRK13184 160 AIFKKLEEEDLLDIDVDERNICYSSMTIPGKIVGTPDYMAPERLLGVPASESTDIYALGVILYQMLTLSFPYRRKKGRKI 239 (932)
T ss_pred ceecccccccccccccccccccccccccCCCCCCCCCCCCHHHhcCCCCCcHhHHHHHHHHHHHHHHCCCCCCCcchhhh
Confidence 97652110 011124699999999999999999999999999999999999999987554433
Q ss_pred HHHhhccccc--ccCCCCCCHHHHHHHHHhhhhCCCCCC-CHHHHHHHHHHHHH
Q 003963 715 IGAVGFMNQR--LEIPKDVDPRWAAIVESCWHSDPQCRP-SFQELVDKLRDLQR 765 (783)
Q Consensus 715 ~~~i~~~~~~--~~~~~~~s~~l~~LI~~cL~~dP~~RP-sa~ell~~L~~L~~ 765 (783)
..... .... ......+++.+.+++.+||..||++|| ++.++++.|+.+..
T Consensus 240 ~~~~~-i~~P~~~~p~~~iP~~L~~LI~rcL~~DP~kR~ss~eeLl~~Le~~lq 292 (932)
T PRK13184 240 SYRDV-ILSPIEVAPYREIPPFLSQIAMKALAVDPAERYSSVQELKQDLEPHLQ 292 (932)
T ss_pred hhhhh-ccChhhccccccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHh
Confidence 22211 1111 112246889999999999999999996 56677777766543
No 262
>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4. Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin
Probab=100.00 E-value=3.8e-36 Score=324.77 Aligned_cols=260 Identities=28% Similarity=0.536 Sum_probs=215.8
Q ss_pred ccceeEeeeeccCCcEEEEEEEEeCC-c----eEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEeceeecCCce
Q 003963 504 WEDLTIGEQIGQGSCGTVYHAVWYGS-Q----DVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRL 578 (783)
Q Consensus 504 ~~~y~i~~~LG~G~fG~Vy~a~~~~~-~----~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~ 578 (783)
.++|++.+.||+|+||.||++.+... . .||+|++..... ......+.+|+.+++.++||||+++++++... ..
T Consensus 6 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~-~~ 83 (303)
T cd05110 6 ETELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTG-PKANVEFMDEALIMASMDHPHLVRLLGVCLSP-TI 83 (303)
T ss_pred hhhceeccccccCCCccEEEEEEecCCCcceeeEEEEeccccCC-HHHHHHHHHHHHHHHhCCCCCcccEEEEEcCC-Cc
Confidence 46789999999999999999987543 2 478888765432 33345688899999999999999999988754 46
Q ss_pred EEEEEecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCccccc
Q 003963 579 CIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHE 658 (783)
Q Consensus 579 ~lV~E~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~~ 658 (783)
++++||+++|+|.+++......+++..++.++.||+.||.|||+++ |+|+||||+|||++.++.+||+|||+++....
T Consensus 84 ~~v~e~~~~g~l~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~--ivH~dikp~Nill~~~~~~kL~Dfg~~~~~~~ 161 (303)
T cd05110 84 QLVTQLMPHGCLLDYVHEHKDNIGSQLLLNWCVQIAKGMMYLEERR--LVHRDLAARNVLVKSPNHVKITDFGLARLLEG 161 (303)
T ss_pred eeeehhcCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHhhcC--eeccccccceeeecCCCceEEccccccccccC
Confidence 7999999999999999876667899999999999999999999998 99999999999999999999999999976543
Q ss_pred ccc--cccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCChHHHHHHhhcccccccCCCCCCHHH
Q 003963 659 TYL--TTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELAT-EKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRW 735 (783)
Q Consensus 659 ~~~--~~~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~l 735 (783)
... ......++..|++||.+.+..++.++|||||||++|+|++ |..||...........+. .......+..++..+
T Consensus 162 ~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DiwslG~~l~el~t~g~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 240 (303)
T cd05110 162 DEKEYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPTREIPDLLE-KGERLPQPPICTIDV 240 (303)
T ss_pred cccccccCCCccccccCCHHHhccCCCChHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHH-CCCCCCCCCCCCHHH
Confidence 221 1222345678999999999999999999999999999997 999998776555444332 333445566788999
Q ss_pred HHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHh
Q 003963 736 AAIVESCWHSDPQCRPSFQELVDKLRDLQRQYF 768 (783)
Q Consensus 736 ~~LI~~cL~~dP~~RPsa~ell~~L~~L~~~~f 768 (783)
.+++..||..+|.+||++.++++.|.++.+...
T Consensus 241 ~~li~~c~~~~p~~Rp~~~~l~~~l~~~~~~~~ 273 (303)
T cd05110 241 YMVMVKCWMIDADSRPKFKELAAEFSRMARDPQ 273 (303)
T ss_pred HHHHHHHcCCChhhCcCHHHHHHHHHHHHhchh
Confidence 999999999999999999999999999876654
No 263
>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin. Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre
Probab=100.00 E-value=4.1e-36 Score=321.97 Aligned_cols=256 Identities=29% Similarity=0.433 Sum_probs=209.6
Q ss_pred cccceeEeeeeccCCcEEEEEEEEeC-CceEEEEEEecccCCHHHHHHHHHHHHHHHhC-CCCceeeEeceeecC-----
Q 003963 503 LWEDLTIGEQIGQGSCGTVYHAVWYG-SQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRL-RHPNVLLFMGAVTSP----- 575 (783)
Q Consensus 503 ~~~~y~i~~~LG~G~fG~Vy~a~~~~-~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l-~HpnIv~l~~~~~~~----- 575 (783)
..++|.+.+.||+|+||.||++.... ++.+|+|++..... ....+.+|+.+++.+ +||||+++++++...
T Consensus 20 ~~~~y~~~~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~~~---~~~~~~~e~~~l~~l~~h~ni~~~~~~~~~~~~~~~ 96 (291)
T cd06639 20 PTDTWEIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPISD---VDEEIEAEYNILQSLPNHPNVVKFYGMFYKADKLVG 96 (291)
T ss_pred CCCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEeccccc---HHHHHHHHHHHHHHhcCCCCeEEEEEEEEeccccCC
Confidence 45789999999999999999999854 56799999865432 234567899999998 799999999998653
Q ss_pred CceEEEEEecCCCCHHHHHhh---cCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCC
Q 003963 576 QRLCIVTEFLPRGSLFRLLQR---NTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGL 652 (783)
Q Consensus 576 ~~~~lV~E~~~ggsL~~~L~~---~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGl 652 (783)
..+|+||||+++++|.+++.. ....+++..++.++.|++.||+|||+.+ |+|+||||+||+++.++.++|+|||+
T Consensus 97 ~~~~lv~ey~~~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~--ivH~dlkp~nili~~~~~~kl~dfg~ 174 (291)
T cd06639 97 GQLWLVLELCNGGSVTELVKGLLICGQRLDEAMISYILYGALLGLQHLHNNR--IIHRDVKGNNILLTTEGGVKLVDFGV 174 (291)
T ss_pred CeeEEEEEECCCCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCC--eeccCCCHHHEEEcCCCCEEEeeccc
Confidence 358999999999999998853 3456899999999999999999999998 99999999999999999999999999
Q ss_pred CcccccccccccCCCCCCcccCcccccCCC-----CCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhcc-ccccc
Q 003963 653 SRLKHETYLTTKTGKGTPQWMAPEVLRNEP-----SDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFM-NQRLE 726 (783)
Q Consensus 653 a~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~-----~s~~sDIwSLG~il~elltG~~Pf~~~~~~~~~~~i~~~-~~~~~ 726 (783)
+..............|+..|+|||++.... ++.++|||||||++|+|++|++||...........+... .....
T Consensus 175 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slGvi~~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~ 254 (291)
T cd06639 175 SAQLTSTRLRRNTSVGTPFWMAPEVIACEQQYDYSYDARCDVWSLGITAIELGDGDPPLFDMHPVKTLFKIPRNPPPTLL 254 (291)
T ss_pred chhcccccccccCccCCccccChhhhcCCCCcccccCCccchHHHHHHHHHHhhCCCCCCCCcHHHHHHHHhcCCCCCCC
Confidence 876554333333456889999999986543 578999999999999999999999887665544443211 11223
Q ss_pred CCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhh
Q 003963 727 IPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQ 769 (783)
Q Consensus 727 ~~~~~s~~l~~LI~~cL~~dP~~RPsa~ell~~L~~L~~~~f~ 769 (783)
.+..++..+.+||.+||+.+|.+||++.++ ++|+||+
T Consensus 255 ~~~~~~~~l~~li~~~l~~~p~~Rps~~~i------l~~~~~~ 291 (291)
T cd06639 255 HPEKWCRSFNHFISQCLIKDFEARPSVTHL------LEHPFIK 291 (291)
T ss_pred cccccCHHHHHHHHHHhhcChhhCcCHHHH------hcCcccC
Confidence 345677899999999999999999999999 6778874
No 264
>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a
Probab=100.00 E-value=2.8e-36 Score=322.27 Aligned_cols=255 Identities=28% Similarity=0.487 Sum_probs=207.4
Q ss_pred cceeEeeeeccCCcEEEEEEEEe-----CCceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEeceeecC--Cc
Q 003963 505 EDLTIGEQIGQGSCGTVYHAVWY-----GSQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSP--QR 577 (783)
Q Consensus 505 ~~y~i~~~LG~G~fG~Vy~a~~~-----~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~--~~ 577 (783)
.-|++.+.||+|+||.||++.+. .+..||+|.+.... .......+.+|+.+++.++||||+++++++... ..
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 82 (284)
T cd05079 4 RFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPES-GGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNG 82 (284)
T ss_pred hhhhhceecCCCCceeEEEEEEccCCCCccceEEEEEcCccc-cHHHHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCCc
Confidence 34788999999999999999742 34579999986543 344456789999999999999999999998775 56
Q ss_pred eEEEEEecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCcccc
Q 003963 578 LCIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKH 657 (783)
Q Consensus 578 ~~lV~E~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~ 657 (783)
.++||||+++++|.+++.+....+++..++.++.||+.||+|||+++ |+||||||+|||++.++.++|+|||++....
T Consensus 83 ~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~i~~~i~~aL~~lH~~g--i~H~dlkp~Nil~~~~~~~~l~dfg~~~~~~ 160 (284)
T cd05079 83 IKLIMEFLPSGSLKEYLPRNKNKINLKQQLKYAVQICKGMDYLGSRQ--YVHRDLAARNVLVESEHQVKIGDFGLTKAIE 160 (284)
T ss_pred eEEEEEccCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCC--eeecccchheEEEcCCCCEEECCCccccccc
Confidence 89999999999999999776556899999999999999999999998 9999999999999999999999999987654
Q ss_pred cccc---cccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCC---------------hHHHHHHhh
Q 003963 658 ETYL---TTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLN---------------SMQVIGAVG 719 (783)
Q Consensus 658 ~~~~---~~~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~elltG~~Pf~~~~---------------~~~~~~~i~ 719 (783)
.... ......++..|+|||++.+..++.++|||||||++|+|+++..|+.... .......+
T Consensus 161 ~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~ellt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 239 (284)
T cd05079 161 TDKEYYTVKDDLDSPVFWYAPECLIQSKFYIASDVWSFGVTLYELLTYCDSESSPMTLFLKMIGPTHGQMTVTRLVRVL- 239 (284)
T ss_pred cCccceeecCCCCCCccccCHHHhccCCCCccccchhhhhhhhhhhcCCCCCccccchhhhhcccccccccHHHHHHHH-
Confidence 3221 1123456778999999998889999999999999999999876642210 01111111
Q ss_pred cccccccCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHH
Q 003963 720 FMNQRLEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDL 763 (783)
Q Consensus 720 ~~~~~~~~~~~~s~~l~~LI~~cL~~dP~~RPsa~ell~~L~~L 763 (783)
......+.+..++..+.+||.+||+.+|.+||++.++++.|+++
T Consensus 240 ~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~~~ 283 (284)
T cd05079 240 EEGKRLPRPPNCPEEVYQLMRKCWEFQPSKRTTFQNLIEGFEAI 283 (284)
T ss_pred HcCccCCCCCCCCHHHHHHHHHHccCCcccCcCHHHHHHHHHhh
Confidence 11223445667899999999999999999999999999998875
No 265
>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6. Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs
Probab=100.00 E-value=3.4e-36 Score=320.65 Aligned_cols=257 Identities=28% Similarity=0.471 Sum_probs=204.8
Q ss_pred cceeEeeeeccCCcEEEEEEEEeC-CceEEEEEEecccCCHHHHHHHHHHHHH-HHhCCCCceeeEeceeecCCceEEEE
Q 003963 505 EDLTIGEQIGQGSCGTVYHAVWYG-SQDVAVKVFSRQEYSDEVIHSFRQEVSL-MKRLRHPNVLLFMGAVTSPQRLCIVT 582 (783)
Q Consensus 505 ~~y~i~~~LG~G~fG~Vy~a~~~~-~~~vAiK~i~~~~~~~~~~~~~~~Ei~i-l~~l~HpnIv~l~~~~~~~~~~~lV~ 582 (783)
++|++.+.||+|+||.||++.+.. ++.||||++......... ..+..|+.+ ++.++||||+++++++..++..|++|
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~-~~~~~e~~~~~~~~~~~~iv~~~~~~~~~~~~~lv~ 79 (283)
T cd06617 1 DDLEVIEELGRGAYGVVDKMRHVPTGTIMAVKRIRATVNSQEQ-KRLLMDLDISMRSVDCPYTVTFYGALFREGDVWICM 79 (283)
T ss_pred CCceEEEEecccCCeEEEEEEEcCCCcEEEEEEEecCCCcHHH-HHHHHHHHHHHHHcCCCCeeeeeEEEecCCcEEEEh
Confidence 478999999999999999999865 578999998765443333 344456554 66778999999999999999999999
Q ss_pred EecCCCCHHHHHhh---cCCcchHHHHHHHHHHHHHHHHHHHhC-CCCEEecCCCCCCEEEcCCCcEEEEecCCCccccc
Q 003963 583 EFLPRGSLFRLLQR---NTTKLDWRRRILMALDIARGVSYLHHC-NPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHE 658 (783)
Q Consensus 583 E~~~ggsL~~~L~~---~~~~l~~~~~~~i~~qi~~aL~~LH~~-~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~~ 658 (783)
||++ ++|.+++.. ....+++..++.++.||+.||+|||++ + ++||||||+|||++.++.+||+|||++.....
T Consensus 80 e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~--i~h~dlkp~nil~~~~~~~kl~dfg~~~~~~~ 156 (283)
T cd06617 80 EVMD-TSLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLHSKLS--VIHRDVKPSNVLINRNGQVKLCDFGISGYLVD 156 (283)
T ss_pred hhhc-ccHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhhcCC--eecCCCCHHHEEECCCCCEEEeeccccccccc
Confidence 9996 688888754 234689999999999999999999986 7 99999999999999999999999999876543
Q ss_pred ccccccCCCCCCcccCcccccC----CCCCchhHHHHHHHHHHHHHcCCCCCCCCC-hHHHHHHhhcccccccCC-CCCC
Q 003963 659 TYLTTKTGKGTPQWMAPEVLRN----EPSDEKSDVYSFGVILWELATEKIPWDNLN-SMQVIGAVGFMNQRLEIP-KDVD 732 (783)
Q Consensus 659 ~~~~~~~~~Gt~~Y~aPE~~~~----~~~s~~sDIwSLG~il~elltG~~Pf~~~~-~~~~~~~i~~~~~~~~~~-~~~s 732 (783)
... .....|+..|+|||.+.+ ..++.++|+|||||++|+|++|..||.... ..+.+..+. ......++ ..++
T Consensus 157 ~~~-~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 234 (283)
T cd06617 157 SVA-KTIDAGCKPYMAPERINPELNQKGYDVKSDVWSLGITMIELATGRFPYDSWKTPFQQLKQVV-EEPSPQLPAEKFS 234 (283)
T ss_pred ccc-cccccCCccccChhhcCCcccccccCccccchhhHHHHHHHHhCCCCCCccccCHHHHHHHH-hcCCCCCCccccC
Confidence 321 123467889999999865 446889999999999999999999997543 222222221 11222233 3578
Q ss_pred HHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhcCcC
Q 003963 733 PRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQASRS 773 (783)
Q Consensus 733 ~~l~~LI~~cL~~dP~~RPsa~ell~~L~~L~~~~f~~~~~ 773 (783)
.++.+||.+||..+|.+||++.++ +.++||+....
T Consensus 235 ~~l~~li~~~l~~~p~~Rp~~~~i------l~~~~~~~~~~ 269 (283)
T cd06617 235 PEFQDFVNKCLKKNYKERPNYPEL------LQHPFFELHLS 269 (283)
T ss_pred HHHHHHHHHHccCChhhCcCHHHH------hcCchhhhccc
Confidence 999999999999999999999999 67899876553
No 266
>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex
Probab=100.00 E-value=1.9e-36 Score=323.03 Aligned_cols=254 Identities=24% Similarity=0.357 Sum_probs=206.8
Q ss_pred ceeEeeeeccCCcEEEEEEEEeC-CceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEeceeecCCceEEEEEe
Q 003963 506 DLTIGEQIGQGSCGTVYHAVWYG-SQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIVTEF 584 (783)
Q Consensus 506 ~y~i~~~LG~G~fG~Vy~a~~~~-~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lV~E~ 584 (783)
+|++.+.||.|+||.||+|.+.. ++.||||++............+.+|+++++.++||||+++++++...+..++||||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 80 (284)
T cd07860 1 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEF 80 (284)
T ss_pred CceeeeeecCCCceEEEEEEECCCCCEEEEEEccccccccccchHHHHHHHHHHhcCCCCCcchhhhcccCCcEEEEeec
Confidence 48899999999999999999864 56799999876544444446788899999999999999999999999999999999
Q ss_pred cCCCCHHHHHhhc-CCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCcccccccccc
Q 003963 585 LPRGSLFRLLQRN-TTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETYLTT 663 (783)
Q Consensus 585 ~~ggsL~~~L~~~-~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~~~~ 663 (783)
+. ++|..++... ...+++..++.++.|++.||+|||+.+ ++|+||+|+||+++.++.+||+|||++..........
T Consensus 81 ~~-~~l~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~--i~H~~l~p~nill~~~~~~~l~dfg~~~~~~~~~~~~ 157 (284)
T cd07860 81 LH-QDLKKFMDASPLSGIPLPLIKSYLFQLLQGLAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY 157 (284)
T ss_pred cc-cCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC--eecCCCCHHHEEECCCCCEEEeeccchhhcccCcccc
Confidence 95 5898888643 346889999999999999999999998 9999999999999999999999999987654433333
Q ss_pred cCCCCCCcccCcccccCCC-CCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhcccc-------------------
Q 003963 664 KTGKGTPQWMAPEVLRNEP-SDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQ------------------- 723 (783)
Q Consensus 664 ~~~~Gt~~Y~aPE~~~~~~-~s~~sDIwSLG~il~elltG~~Pf~~~~~~~~~~~i~~~~~------------------- 723 (783)
....+++.|+|||++.+.. ++.++|||||||++|+|+||+.||...+.......+.....
T Consensus 158 ~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (284)
T cd07860 158 THEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSLPDYKPS 237 (284)
T ss_pred ccccccccccCCeEEecCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhhhhHHHHHHhh
Confidence 3445788999999887654 58899999999999999999999977655433222110000
Q ss_pred --------cccCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHh
Q 003963 724 --------RLEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYF 768 (783)
Q Consensus 724 --------~~~~~~~~s~~l~~LI~~cL~~dP~~RPsa~ell~~L~~L~~~~f 768 (783)
...+...+++++.++|.+||+.||.+||++.++ +.|+||
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~------l~~~~f 284 (284)
T cd07860 238 FPKWARQDFSKVVPPLDEDGRDLLSQMLHYDPNKRISAKAA------LAHPFF 284 (284)
T ss_pred cccccccCHHHHcccCCHHHHHHHHHhcCCCcccCCCHHHH------hcCCCC
Confidence 001123578899999999999999999999999 566776
No 267
>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4
Probab=100.00 E-value=4.1e-36 Score=316.10 Aligned_cols=248 Identities=31% Similarity=0.581 Sum_probs=209.5
Q ss_pred ceeEeeeeccCCcEEEEEEEEe-CCceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEeceeecCCceEEEEEe
Q 003963 506 DLTIGEQIGQGSCGTVYHAVWY-GSQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIVTEF 584 (783)
Q Consensus 506 ~y~i~~~LG~G~fG~Vy~a~~~-~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lV~E~ 584 (783)
+|.+.+.||+|+||.||++.+. .++.|++|++............+.+|+.+++.++|+||+++++++.....+++|+||
T Consensus 1 ~y~~~~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~lv~e~ 80 (264)
T cd06626 1 RWQRGNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDNDPKTIKEIADEMKVLELLKHPNLVKYYGVEVHREKVYIFMEY 80 (264)
T ss_pred CceeeeEeecCCCcEEEEEEECCCCcEEEEEEEECcccchHHHHHHHHHHHHHHhCCCCChhheeeeEecCCEEEEEEec
Confidence 5889999999999999999875 457899999987766556778899999999999999999999999999999999999
Q ss_pred cCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCcccccccccc-
Q 003963 585 LPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETYLTT- 663 (783)
Q Consensus 585 ~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~~~~- 663 (783)
+++++|.+++... ..+++..+..++.+++.||.|||+.+ |+|+||+|+||+++.++.+||+|||++..........
T Consensus 81 ~~~~~L~~~~~~~-~~~~~~~~~~i~~~i~~~l~~lh~~~--i~H~dl~~~nil~~~~~~~kl~d~g~~~~~~~~~~~~~ 157 (264)
T cd06626 81 CSGGTLEELLEHG-RILDEHVIRVYTLQLLEGLAYLHSHG--IVHRDIKPANIFLDHNGVIKLGDFGCAVKLKNNTTTMG 157 (264)
T ss_pred CCCCcHHHHHhhc-CCCChHHHHHHHHHHHHHHHHHHHCC--cccCCCCHHHEEECCCCCEEEcccccccccCCCCCccc
Confidence 9999999999764 35788999999999999999999998 9999999999999999999999999987654432211
Q ss_pred ---cCCCCCCcccCcccccCCC---CCchhHHHHHHHHHHHHHcCCCCCCCCCh-HHHHHHhhcccccccCCCC--CCHH
Q 003963 664 ---KTGKGTPQWMAPEVLRNEP---SDEKSDVYSFGVILWELATEKIPWDNLNS-MQVIGAVGFMNQRLEIPKD--VDPR 734 (783)
Q Consensus 664 ---~~~~Gt~~Y~aPE~~~~~~---~s~~sDIwSLG~il~elltG~~Pf~~~~~-~~~~~~i~~~~~~~~~~~~--~s~~ 734 (783)
....+++.|++||++.+.. .+.++|||||||++|+|++|..||..... ......+. ......+|.. +++.
T Consensus 158 ~~~~~~~~~~~~~~PE~~~~~~~~~~~~~~Dv~s~G~il~~l~~g~~pf~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 236 (264)
T cd06626 158 EEVQSLAGTPAYMAPEVITGGKGKGHGRAADIWSLGCVVLEMATGKRPWSELDNEFQIMFHVG-AGHKPPIPDSLQLSPE 236 (264)
T ss_pred ccccCCcCCcCccChhhccCCCCCCCCcccchHHHHHHHHHHHhCCCCccCCcchHHHHHHHh-cCCCCCCCcccccCHH
Confidence 1346788999999998776 78999999999999999999999976633 22222222 2333344444 4899
Q ss_pred HHHHHHHhhhhCCCCCCCHHHHH
Q 003963 735 WAAIVESCWHSDPQCRPSFQELV 757 (783)
Q Consensus 735 l~~LI~~cL~~dP~~RPsa~ell 757 (783)
+.+||.+||+.+|.+||++.+++
T Consensus 237 ~~~li~~~l~~~p~~R~~~~~i~ 259 (264)
T cd06626 237 GKDFLDRCLESDPKKRPTASELL 259 (264)
T ss_pred HHHHHHHHccCCcccCCCHHHHh
Confidence 99999999999999999999994
No 268
>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]
Probab=100.00 E-value=3.3e-36 Score=326.99 Aligned_cols=260 Identities=30% Similarity=0.526 Sum_probs=223.8
Q ss_pred ccccccceeEeeeeccCCcEEEEEEEEeCCceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEeceeecCCceE
Q 003963 500 YEILWEDLTIGEQIGQGSCGTVYHAVWYGSQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLC 579 (783)
Q Consensus 500 ~e~~~~~y~i~~~LG~G~fG~Vy~a~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~ 579 (783)
.|+......+.++||+|-||.|.++...+...||+|.++..... .....|..|+++|.+|+|||||.++++|..++.+|
T Consensus 533 ~EfPRs~L~~~ekiGeGqFGEVhLCeveg~lkVAVK~Lr~~a~~-~~r~~F~kEIkiLsqLkhPNIveLvGVC~~DePic 611 (807)
T KOG1094|consen 533 VEFPRSRLRFKEKIGEGQFGEVHLCEVEGPLKVAVKILRPDATK-NARNDFLKEIKILSRLKHPNIVELLGVCVQDDPLC 611 (807)
T ss_pred hhcchhheehhhhhcCcccceeEEEEecCceEEEEeecCcccch-hHHHHHHHHHHHHhccCCCCeeEEEeeeecCCchH
Confidence 35666788899999999999999999887789999999876643 44678999999999999999999999999999999
Q ss_pred EEEEecCCCCHHHHHhhcCCcc-hHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCcccc-
Q 003963 580 IVTEFLPRGSLFRLLQRNTTKL-DWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKH- 657 (783)
Q Consensus 580 lV~E~~~ggsL~~~L~~~~~~l-~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~- 657 (783)
+|+||++.|+|.++|.++..+. .-.....|+.||+.||+||.+.+ +|||||.+.|+|++.++++||+|||+++..-
T Consensus 612 mI~EYmEnGDLnqFl~aheapt~~t~~~vsi~tqiasgmaYLes~n--fVHrd~a~rNcLv~~e~~iKiadfgmsR~lys 689 (807)
T KOG1094|consen 612 MITEYMENGDLNQFLSAHELPTAETAPGVSICTQIASGMAYLESLN--FVHRDLATRNCLVDGEFTIKIADFGMSRNLYS 689 (807)
T ss_pred HHHHHHhcCcHHHHHHhccCcccccchhHHHHHHHHHHHHHHHhhc--hhhccccccceeecCcccEEecCccccccccc
Confidence 9999999999999998874333 55667789999999999999999 9999999999999999999999999998432
Q ss_pred -cccccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHc--CCCCCCCCChHHHHHHhhcccc------cccCC
Q 003963 658 -ETYLTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELAT--EKIPWDNLNSMQVIGAVGFMNQ------RLEIP 728 (783)
Q Consensus 658 -~~~~~~~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~ellt--G~~Pf~~~~~~~~~~~i~~~~~------~~~~~ 728 (783)
+.+......+-..+|||||.+...+++.++|+|+||+++||+++ ...||..+...+..++...... -+..|
T Consensus 690 g~yy~vqgr~vlpiRwmawEsillgkFttaSDvWafgvTlwE~~~~C~e~Py~~lt~e~vven~~~~~~~~~~~~~l~~P 769 (807)
T KOG1094|consen 690 GDYYRVQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEVFMLCREQPYSQLTDEQVVENAGEFFRDQGRQVVLSRP 769 (807)
T ss_pred CCceeeecceeeeeeehhHHHHHhccccchhhhhhhHHHHHHHHHHHhhCchhhhhHHHHHHhhhhhcCCCCcceeccCC
Confidence 22322333455789999999999999999999999999999765 7899999999888877654332 24567
Q ss_pred CCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHH
Q 003963 729 KDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRD 762 (783)
Q Consensus 729 ~~~s~~l~~LI~~cL~~dP~~RPsa~ell~~L~~ 762 (783)
..++..+.++|.+||..+..+||+++++...|.+
T Consensus 770 ~~cp~~lyelml~Cw~~es~~RPsFe~lh~~lq~ 803 (807)
T KOG1094|consen 770 PACPQGLYELMLRCWRRESEQRPSFEQLHLFLQE 803 (807)
T ss_pred CcCcHHHHHHHHHHhchhhhcCCCHHHHHHHHHH
Confidence 8899999999999999999999999999766544
No 269
>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their
Probab=100.00 E-value=2.5e-36 Score=318.78 Aligned_cols=255 Identities=31% Similarity=0.503 Sum_probs=212.0
Q ss_pred ceeEeeeeccCCcEEEEEEEEeC-CceEEEEEEecccCC----HHHHHHHHHHHHHHHhCCCCceeeEeceeecCCceEE
Q 003963 506 DLTIGEQIGQGSCGTVYHAVWYG-SQDVAVKVFSRQEYS----DEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCI 580 (783)
Q Consensus 506 ~y~i~~~LG~G~fG~Vy~a~~~~-~~~vAiK~i~~~~~~----~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~l 580 (783)
+|+..+.||+|+||.||++.+.. ++.||+|++...... ......+.+|+.+++.++|+||+++++++...+.+++
T Consensus 1 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~ 80 (268)
T cd06630 1 EWLKGQQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHIIRMLGATCEDSHFNL 80 (268)
T ss_pred CccccceecCcCceEEEEEEEcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcCCCceehhhceeccCCeEEE
Confidence 47888999999999999998744 577999998754321 2345788999999999999999999999999999999
Q ss_pred EEEecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCC-cEEEEecCCCcccccc
Q 003963 581 VTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHW-TVKVGDFGLSRLKHET 659 (783)
Q Consensus 581 V~E~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~-~vkL~DFGla~~~~~~ 659 (783)
||||+++++|.+++... .++++..++.++.||+.||.|||+++ ++|+||||+||+++.++ .++|+|||++......
T Consensus 81 v~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~ql~~al~~LH~~~--i~H~~i~~~nil~~~~~~~~~l~dfg~~~~~~~~ 157 (268)
T cd06630 81 FVEWMAGGSVSHLLSKY-GAFKEAVIINYTEQLLRGLSYLHENQ--IIHRDVKGANLLIDSTGQRLRIADFGAAARLAAK 157 (268)
T ss_pred EEeccCCCcHHHHHHHh-CCCCHHHHHHHHHHHHHHHHHHHhCC--eecCCCCHHHEEEcCCCCEEEEcccccccccccc
Confidence 99999999999999764 46889999999999999999999998 99999999999998775 5999999998765432
Q ss_pred cc----cccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChH---HHHHHhhcccccccCCCCCC
Q 003963 660 YL----TTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSM---QVIGAVGFMNQRLEIPKDVD 732 (783)
Q Consensus 660 ~~----~~~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~elltG~~Pf~~~~~~---~~~~~i~~~~~~~~~~~~~s 732 (783)
.. ......|+..|+|||.+.+..++.++|+|||||++|+|++|..||...... .....+........++..++
T Consensus 158 ~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (268)
T cd06630 158 GTGAGEFQGQLLGTIAFMAPEVLRGEQYGRSCDVWSVGCVIIEMATAKPPWNAEKHSNHLALIFKIASATTAPSIPEHLS 237 (268)
T ss_pred cccCCccccccccccceeCHhHhccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCcchHHHHHHHhccCCCCCCchhhC
Confidence 11 112345788999999999888999999999999999999999999654432 22222222334556677789
Q ss_pred HHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhh
Q 003963 733 PRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQ 769 (783)
Q Consensus 733 ~~l~~LI~~cL~~dP~~RPsa~ell~~L~~L~~~~f~ 769 (783)
+++.++|.+||..+|.+||++.++ +.|+||+
T Consensus 238 ~~~~~~i~~~l~~~p~~R~~~~~l------l~~~~~~ 268 (268)
T cd06630 238 PGLRDVTLRCLELQPEDRPPSREL------LKHPVFR 268 (268)
T ss_pred HHHHHHHHHHcCCCcccCcCHHHH------hcCcccC
Confidence 999999999999999999999999 6778874
No 270
>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.
Probab=100.00 E-value=3e-36 Score=315.92 Aligned_cols=254 Identities=27% Similarity=0.498 Sum_probs=214.4
Q ss_pred ceeEeeeeccCCcEEEEEEEEeC-CceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEeceeecCCceEEEEEe
Q 003963 506 DLTIGEQIGQGSCGTVYHAVWYG-SQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIVTEF 584 (783)
Q Consensus 506 ~y~i~~~LG~G~fG~Vy~a~~~~-~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lV~E~ 584 (783)
+|++.+.||+|+||.||++.+.. +..||+|.+............+.+|+.+++.++|+||+++++++......++||||
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~ 80 (257)
T cd08225 1 RYEIIKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMPVKEKEASKKEVILLAKMKHPNIVTFFASFQENGRLFIVMEY 80 (257)
T ss_pred CceEEEEecCCCcceEEEEEEcCCCceEEEEEeeHhhccchhhHHHHHHHHHHHhCCCCChhhhhheeccCCeEEEEEec
Confidence 58899999999999999999865 56799999876544444456788999999999999999999999999999999999
Q ss_pred cCCCCHHHHHhhc-CCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCC-cEEEEecCCCccccccccc
Q 003963 585 LPRGSLFRLLQRN-TTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHW-TVKVGDFGLSRLKHETYLT 662 (783)
Q Consensus 585 ~~ggsL~~~L~~~-~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~-~vkL~DFGla~~~~~~~~~ 662 (783)
+++++|.+++... ...+++..++.++.|++.||.|||+.+ |+|+||||+||+++.++ .++|+|||.+.........
T Consensus 81 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~--i~H~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~~~ 158 (257)
T cd08225 81 CDGGDLMKRINRQRGVLFSEDQILSWFVQISLGLKHIHDRK--ILHRDIKSQNIFLSKNGMVAKLGDFGIARQLNDSMEL 158 (257)
T ss_pred CCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCC--cccccCCHHHEEEcCCCCeEEecccccchhccCCccc
Confidence 9999999998653 335789999999999999999999998 99999999999998875 4699999998766544333
Q ss_pred ccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhcccccccCCCCCCHHHHHHHHHh
Q 003963 663 TKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAAIVESC 742 (783)
Q Consensus 663 ~~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~l~~LI~~c 742 (783)
.....|++.|+|||++.+..++.++|+|||||++|+|++|..||...+..+....+. ......++..++.++.++|.+|
T Consensus 159 ~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~i~~~ 237 (257)
T cd08225 159 AYTCVGTPYYLSPEICQNRPYNNKTDIWSLGCVLYELCTLKHPFEGNNLHQLVLKIC-QGYFAPISPNFSRDLRSLISQL 237 (257)
T ss_pred ccccCCCccccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHh-cccCCCCCCCCCHHHHHHHHHH
Confidence 334468899999999988889999999999999999999999998776655554432 2233445567889999999999
Q ss_pred hhhCCCCCCCHHHHHHHHHHHHHHHh
Q 003963 743 WHSDPQCRPSFQELVDKLRDLQRQYF 768 (783)
Q Consensus 743 L~~dP~~RPsa~ell~~L~~L~~~~f 768 (783)
|..+|++||++.++ +.++||
T Consensus 238 l~~~p~~Rpt~~~l------l~~~~~ 257 (257)
T cd08225 238 FKVSPRDRPSITSI------LKRPFL 257 (257)
T ss_pred hccChhhCcCHHHH------hhCCCC
Confidence 99999999999999 455654
No 271
>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the
Probab=100.00 E-value=2.1e-36 Score=324.52 Aligned_cols=255 Identities=24% Similarity=0.330 Sum_probs=209.7
Q ss_pred cceeEeeeeccCCcEEEEEEEEeC-CceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEeceeecC--CceEEE
Q 003963 505 EDLTIGEQIGQGSCGTVYHAVWYG-SQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSP--QRLCIV 581 (783)
Q Consensus 505 ~~y~i~~~LG~G~fG~Vy~a~~~~-~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~--~~~~lV 581 (783)
++|++.+.||.|+||.||+|.+.. ++.+++|.+............+.+|+.+++.++||||+++++++... ..+|+|
T Consensus 5 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~lv 84 (293)
T cd07843 5 DEYEKLNRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEKEGFPITSLREINILLKLQHPNIVTVKEVVVGSNLDKIYMV 84 (293)
T ss_pred hhhhhhhhhcCCCCeEEEEEEECCCCcEEEEEEEeeccccccchhhHHHHHHHHHhcCCCCEEEEEEEEEecCCCcEEEE
Confidence 578999999999999999999864 56799999876554444445677899999999999999999998877 889999
Q ss_pred EEecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCcccccccc
Q 003963 582 TEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETYL 661 (783)
Q Consensus 582 ~E~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~~ 661 (783)
|||++ ++|.+++......+++..++.++.||+.||+|||+++ |+|+||||+|||++.++.++|+|||++........
T Consensus 85 ~e~~~-~~L~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~--i~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~ 161 (293)
T cd07843 85 MEYVE-HDLKSLMETMKQPFLQSEVKCLMLQLLSGVAHLHDNW--ILHRDLKTSNLLLNNRGILKICDFGLAREYGSPLK 161 (293)
T ss_pred ehhcC-cCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCC--eeeccCCHHHEEECCCCcEEEeecCceeeccCCcc
Confidence 99996 4999998776667899999999999999999999998 99999999999999999999999999876554432
Q ss_pred cccCCCCCCcccCcccccCCC-CCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccc------------------
Q 003963 662 TTKTGKGTPQWMAPEVLRNEP-SDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMN------------------ 722 (783)
Q Consensus 662 ~~~~~~Gt~~Y~aPE~~~~~~-~s~~sDIwSLG~il~elltG~~Pf~~~~~~~~~~~i~~~~------------------ 722 (783)
......+++.|+|||.+.+.. ++.++|||||||++|+|++|.+||...........+....
T Consensus 162 ~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (293)
T cd07843 162 PYTQLVVTLWYRAPELLLGAKEYSTAIDMWSVGCIFAELLTKKPLFPGKSEIDQLNKIFKLLGTPTEKIWPGFSELPGAK 241 (293)
T ss_pred ccccccccccccCchhhcCCccccchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhccchhc
Confidence 333445788999999987654 6899999999999999999999998776554443321100
Q ss_pred -----------ccccCCCC-CCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHh
Q 003963 723 -----------QRLEIPKD-VDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYF 768 (783)
Q Consensus 723 -----------~~~~~~~~-~s~~l~~LI~~cL~~dP~~RPsa~ell~~L~~L~~~~f 768 (783)
....++.. +++.+.+||.+||+.+|++|||+.++ +.|+||
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~t~~el------l~~~~f 293 (293)
T cd07843 242 KKTFTKYPYNQLRKKFPALSLSDNGFDLLNRLLTYDPAKRISAEDA------LKHPYF 293 (293)
T ss_pred ccccccccchhhhccccccCCChHHHHHHHHHhccCccccCCHHHH------hcCCCC
Confidence 00112222 58889999999999999999999999 566765
No 272
>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the
Probab=100.00 E-value=2.8e-36 Score=323.02 Aligned_cols=255 Identities=25% Similarity=0.359 Sum_probs=203.2
Q ss_pred ccceeEeeeeccCCcEEEEEEEEeC-CceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEeceeecCCceEEEE
Q 003963 504 WEDLTIGEQIGQGSCGTVYHAVWYG-SQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIVT 582 (783)
Q Consensus 504 ~~~y~i~~~LG~G~fG~Vy~a~~~~-~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lV~ 582 (783)
.++|++.++||.|+||.||++.+.. ++.||||.+....... ....+.+|+.+++.++||||+++++++......++||
T Consensus 4 ~~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 82 (291)
T cd07844 4 LETYKKLDKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEEG-APFTAIREASLLKDLKHANIVTLHDIIHTKKTLTLVF 82 (291)
T ss_pred ccceeEEEEEeecCCeEEEEEEEcCCCcEEEEEEEecccccC-CchhHHHHHHHHhhCCCcceeeEEEEEecCCeEEEEE
Confidence 3689999999999999999999864 5789999987543221 1234567999999999999999999999999999999
Q ss_pred EecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCccccccccc
Q 003963 583 EFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETYLT 662 (783)
Q Consensus 583 E~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~~~ 662 (783)
||+.+ +|.+++......+++..++.++.||+.||.|||+.+ |+|+||||+|||++.++.+||+|||++.........
T Consensus 83 e~~~~-~L~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~~--i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~ 159 (291)
T cd07844 83 EYLDT-DLKQYMDDCGGGLSMHNVRLFLFQLLRGLAYCHQRR--VLHRDLKPQNLLISERGELKLADFGLARAKSVPSKT 159 (291)
T ss_pred ecCCC-CHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCC--eecccCCHHHEEEcCCCCEEECccccccccCCCCcc
Confidence 99975 999998776667899999999999999999999998 999999999999999999999999998754332222
Q ss_pred ccCCCCCCcccCcccccC-CCCCchhHHHHHHHHHHHHHcCCCCCCCCC-hHHHHHHhhcc-c-----------------
Q 003963 663 TKTGKGTPQWMAPEVLRN-EPSDEKSDVYSFGVILWELATEKIPWDNLN-SMQVIGAVGFM-N----------------- 722 (783)
Q Consensus 663 ~~~~~Gt~~Y~aPE~~~~-~~~s~~sDIwSLG~il~elltG~~Pf~~~~-~~~~~~~i~~~-~----------------- 722 (783)
.....++..|+|||++.+ ..++.++|||||||++|+|++|..||.... ..+....+... .
T Consensus 160 ~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (291)
T cd07844 160 YSNEVVTLWYRPPDVLLGSTEYSTSLDMWGVGCIFYEMATGRPLFPGSTDVEDQLHKIFRVLGTPTEETWPGVSSNPEFK 239 (291)
T ss_pred ccccccccccCCcHHhhcCcccCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHhcCCCChhhhhhhhhccccc
Confidence 223356889999999876 457899999999999999999999997654 22211111000 0
Q ss_pred -ccc---------cCCCCCC--HHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHh
Q 003963 723 -QRL---------EIPKDVD--PRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYF 768 (783)
Q Consensus 723 -~~~---------~~~~~~s--~~l~~LI~~cL~~dP~~RPsa~ell~~L~~L~~~~f 768 (783)
... .....++ .++.++|.+||..+|++||++.++ ++++||
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~p~~Rps~~e~------l~~~~f 291 (291)
T cd07844 240 PYSFPFYPPRPLINHAPRLDRIPHGEELALKFLQYEPKKRISAAEA------MKHPYF 291 (291)
T ss_pred cccccccCChhHHHhCcCCCCchhHHHHHHHHhccCcccccCHHHH------hcCCCC
Confidence 000 0001234 788999999999999999999999 566766
No 273
>PHA03210 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=3e-36 Score=347.86 Aligned_cols=259 Identities=18% Similarity=0.255 Sum_probs=194.0
Q ss_pred cccceeEeeeeccCCcEEEEEEEEeCCc--eEEEEEE---------------ecccCCHHHHHHHHHHHHHHHhCCCCce
Q 003963 503 LWEDLTIGEQIGQGSCGTVYHAVWYGSQ--DVAVKVF---------------SRQEYSDEVIHSFRQEVSLMKRLRHPNV 565 (783)
Q Consensus 503 ~~~~y~i~~~LG~G~fG~Vy~a~~~~~~--~vAiK~i---------------~~~~~~~~~~~~~~~Ei~il~~l~HpnI 565 (783)
..++|+++++||+|+||.||++..+... .+++|.+ +...........+.+|+.+|+.++||||
T Consensus 146 ~~~~Y~ii~~LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~Ei~il~~l~HpnI 225 (501)
T PHA03210 146 FLAHFRVIDDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVKAGSRAAIQLENEILALGRLNHENI 225 (501)
T ss_pred hhhccEEEeEecCCCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhhcchHHHHHHHHHHHHHHhCCCCCc
Confidence 4578999999999999999998764321 1222211 1111122345568899999999999999
Q ss_pred eeEeceeecCCceEEEEEecCCCCHHHHHhhcC----CcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcC
Q 003963 566 LLFMGAVTSPQRLCIVTEFLPRGSLFRLLQRNT----TKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDK 641 (783)
Q Consensus 566 v~l~~~~~~~~~~~lV~E~~~ggsL~~~L~~~~----~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~ 641 (783)
|++++++...+..|+||+++. ++|..++.... .......++.++.||+.||.|||+++ ||||||||+||||+.
T Consensus 226 v~l~~~~~~~~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH~~g--IiHrDLKP~NILl~~ 302 (501)
T PHA03210 226 LKIEEILRSEANTYMITQKYD-FDLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIHDKK--LIHRDIKLENIFLNC 302 (501)
T ss_pred CcEeEEEEECCeeEEEEeccc-cCHHHHHhhccccccccccHHHHHHHHHHHHHHHHHHHhCC--eecCCCCHHHEEECC
Confidence 999999999999999999994 57887775322 22345667789999999999999998 999999999999999
Q ss_pred CCcEEEEecCCCcccccccc-cccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCC-CCCCC--hH-HHHH
Q 003963 642 HWTVKVGDFGLSRLKHETYL-TTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIP-WDNLN--SM-QVIG 716 (783)
Q Consensus 642 ~~~vkL~DFGla~~~~~~~~-~~~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~elltG~~P-f~~~~--~~-~~~~ 716 (783)
++.+||+|||++........ .....+||+.|+|||++.+..++.++|||||||+||||++|..+ |.... .. +...
T Consensus 303 ~~~vkL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~~~~~p~~~~~~~~~~~~~~ 382 (501)
T PHA03210 303 DGKIVLGDFGTAMPFEKEREAFDYGWVGTVATNSPEILAGDGYCEITDIWSCGLILLDMLSHDFCPIGDGGGKPGKQLLK 382 (501)
T ss_pred CCCEEEEeCCCceecCcccccccccccCCcCCCCchhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCccCCCCCHHHHHHH
Confidence 99999999999976544321 22345799999999999999999999999999999999998754 43221 11 1111
Q ss_pred Hhhccc---cc-----------------c----c-----CCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHH
Q 003963 717 AVGFMN---QR-----------------L----E-----IPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQY 767 (783)
Q Consensus 717 ~i~~~~---~~-----------------~----~-----~~~~~s~~l~~LI~~cL~~dP~~RPsa~ell~~L~~L~~~~ 767 (783)
.+.... .. . . ....++.++.++|.+||+.||.+|||+.|+ |.|+|
T Consensus 383 ~~~~~~~~~~~~p~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~li~kmL~~DP~~Rpsa~el------L~hp~ 456 (501)
T PHA03210 383 IIDSLSVCDEEFPDPPCKLFDYIDSAEIDHAGHSVPPLIRNLGLPADFEYPLVKMLTFDWHLRPGAAEL------LALPL 456 (501)
T ss_pred HHHhcccChhhcCCcHHHHHHHhhhhhcccCccchhhHHHhcCCChHHHHHHHHHhccCcccCcCHHHH------hhChh
Confidence 111000 00 0 0 011356678889999999999999999999 67888
Q ss_pred hhc
Q 003963 768 FQA 770 (783)
Q Consensus 768 f~~ 770 (783)
|+.
T Consensus 457 f~~ 459 (501)
T PHA03210 457 FSA 459 (501)
T ss_pred hhc
Confidence 865
No 274
>smart00219 TyrKc Tyrosine kinase, catalytic domain. Phosphotransferases. Tyrosine-specific kinase subfamily.
Probab=100.00 E-value=6e-36 Score=313.20 Aligned_cols=250 Identities=38% Similarity=0.679 Sum_probs=212.4
Q ss_pred eeEeeeeccCCcEEEEEEEEeC-----CceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEeceeecCCceEEE
Q 003963 507 LTIGEQIGQGSCGTVYHAVWYG-----SQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIV 581 (783)
Q Consensus 507 y~i~~~LG~G~fG~Vy~a~~~~-----~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lV 581 (783)
+++.+.||.|+||.||++.+.. ...||+|++..... ......+..|+.+++.++|+||+++++++...+..+++
T Consensus 1 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~i 79 (258)
T smart00219 1 LTLGKKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDAD-EQQIEEFLREARIMRKLDHPNIVKLLGVCTEEEPLMIV 79 (258)
T ss_pred CcccceeccCCCcceEEEEecCCCCCCCceEEEEEccCCCC-hHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCeeEEE
Confidence 3577899999999999999764 25699999865432 33557888999999999999999999999999999999
Q ss_pred EEecCCCCHHHHHhhcCCc-chHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCccccccc
Q 003963 582 TEFLPRGSLFRLLQRNTTK-LDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETY 660 (783)
Q Consensus 582 ~E~~~ggsL~~~L~~~~~~-l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~ 660 (783)
|||+++++|.+++...... +++..++.++.||+.||+|||+.+ ++|+||||+||+++.++.++|+|||++.......
T Consensus 80 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lh~~~--~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~ 157 (258)
T smart00219 80 MEYMEGGDLLDYLRKNRPKELSLSDLLSFALQIARGMEYLESKN--FIHRDLAARNCLVGENLVVKISDFGLSRDLYDDD 157 (258)
T ss_pred EeccCCCCHHHHHHhhhhccCCHHHHHHHHHHHHHHHHHHhcCC--eeecccccceEEEccCCeEEEcccCCceeccccc
Confidence 9999999999999765444 899999999999999999999998 9999999999999999999999999987655431
Q ss_pred cccc-CCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCChHHHHHHhhcccccccCCCCCCHHHHHH
Q 003963 661 LTTK-TGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELAT-EKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAAI 738 (783)
Q Consensus 661 ~~~~-~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~l~~L 738 (783)
.... ...+++.|++||.+.+..++.++|||||||++|+|++ |.+||...+.......+... .....+..++.++.++
T Consensus 158 ~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~i~~~l~~~g~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 236 (258)
T smart00219 158 YYKKKGGKLPIRWMAPESLKDGKFTSKSDVWSFGVLLWEIFTLGESPYPGMSNEEVLEYLKKG-YRLPKPENCPPEIYKL 236 (258)
T ss_pred ccccccCCCcccccChHHhccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhcC-CCCCCCCcCCHHHHHH
Confidence 1111 2236789999999988889999999999999999998 89999887777766655432 3445666789999999
Q ss_pred HHHhhhhCCCCCCCHHHHHHHH
Q 003963 739 VESCWHSDPQCRPSFQELVDKL 760 (783)
Q Consensus 739 I~~cL~~dP~~RPsa~ell~~L 760 (783)
+.+||..+|.+|||+.++++.|
T Consensus 237 i~~~l~~~p~~Rpt~~~ll~~l 258 (258)
T smart00219 237 MLQCWAEDPEDRPTFSELVEIL 258 (258)
T ss_pred HHHHCcCChhhCcCHHHHHhhC
Confidence 9999999999999999998753
No 275
>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase. Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki
Probab=100.00 E-value=5.1e-36 Score=314.58 Aligned_cols=247 Identities=33% Similarity=0.606 Sum_probs=208.5
Q ss_pred cccceeEeeeeccCCcEEEEEEEEeCCceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEeceeecCCceEEEE
Q 003963 503 LWEDLTIGEQIGQGSCGTVYHAVWYGSQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIVT 582 (783)
Q Consensus 503 ~~~~y~i~~~LG~G~fG~Vy~a~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lV~ 582 (783)
..++|++.+.||+|+||.||++.. .++.||+|++.... ....+.+|+.+++.++||||+++++++..+ ..+++|
T Consensus 4 ~~~~~~~~~~lg~g~~g~v~~~~~-~~~~~~iK~~~~~~----~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~-~~~~v~ 77 (254)
T cd05083 4 NLQKLTLGEIIGEGEFGAVLQGEY-TGQKVAVKNIKCDV----TAQAFLEETAVMTKLHHKNLVRLLGVILHN-GLYIVM 77 (254)
T ss_pred cHHHceeeeeeccCCCCceEeccc-CCCceEEEeecCcc----hHHHHHHHHHHHHhCCCCCcCeEEEEEcCC-CcEEEE
Confidence 347899999999999999999874 45679999986432 235678899999999999999999998754 479999
Q ss_pred EecCCCCHHHHHhhcC-CcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCcccccccc
Q 003963 583 EFLPRGSLFRLLQRNT-TKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETYL 661 (783)
Q Consensus 583 E~~~ggsL~~~L~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~~ 661 (783)
||+++++|.+++.... ..+++..++.++.|++.||.|||+.+ ++||||||+||+++.++.++|+|||++.......
T Consensus 78 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~--~~H~dl~p~nili~~~~~~kl~Dfg~~~~~~~~~- 154 (254)
T cd05083 78 ELMSKGNLVNFLRTRGRALVSVIQLLQFSLDVAEGMEYLESKK--LVHRDLAARNILVSEDGVAKVSDFGLARVGSMGV- 154 (254)
T ss_pred ECCCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhCC--eeccccCcceEEEcCCCcEEECCCccceeccccC-
Confidence 9999999999997543 35789999999999999999999988 9999999999999999999999999987543321
Q ss_pred cccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCChHHHHHHhhcccccccCCCCCCHHHHHHHH
Q 003963 662 TTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELAT-EKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAAIVE 740 (783)
Q Consensus 662 ~~~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~l~~LI~ 740 (783)
.....+..|+|||.+.+..++.++|+|||||++|+|++ |++||...........+.. ...+..+..++..+.++|.
T Consensus 155 --~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~li~ 231 (254)
T cd05083 155 --DNSKLPVKWTAPEALKHKKFSSKSDVWSYGVLLWEVFSYGRAPYPKMSLKEVKECVEK-GYRMEPPEGCPADVYVLMT 231 (254)
T ss_pred --CCCCCCceecCHHHhccCCcCchhhHHHHHHHHHHHHhCCCCCCccCCHHHHHHHHhC-CCCCCCCCcCCHHHHHHHH
Confidence 12234578999999998889999999999999999997 9999988877666555432 2344456678999999999
Q ss_pred HhhhhCCCCCCCHHHHHHHHH
Q 003963 741 SCWHSDPQCRPSFQELVDKLR 761 (783)
Q Consensus 741 ~cL~~dP~~RPsa~ell~~L~ 761 (783)
+||..+|.+||++.++++.|+
T Consensus 232 ~~l~~~p~~Rp~~~~l~~~l~ 252 (254)
T cd05083 232 SCWETEPKKRPSFHKLREKLE 252 (254)
T ss_pred HHcCCChhhCcCHHHHHHHHc
Confidence 999999999999999988765
No 276
>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK
Probab=100.00 E-value=6.9e-36 Score=311.75 Aligned_cols=254 Identities=34% Similarity=0.569 Sum_probs=219.5
Q ss_pred ceeEeeeeccCCcEEEEEEEEe-CCceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEeceeecC--CceEEEE
Q 003963 506 DLTIGEQIGQGSCGTVYHAVWY-GSQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSP--QRLCIVT 582 (783)
Q Consensus 506 ~y~i~~~LG~G~fG~Vy~a~~~-~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~--~~~~lV~ 582 (783)
+|.+.+.||+|++|.||+|.+. .++.|++|++............+.+|+.+++.++||||+++++.+... ..++++|
T Consensus 1 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~ 80 (260)
T cd06606 1 EWTRGELLGRGSFGSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSLQHPNIVRYYGSERDEEKNTLNIFL 80 (260)
T ss_pred CceeeeEeeecCceEEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHHHHcCCCCEeeEEEEEecCCCCeEEEEE
Confidence 4788899999999999999987 457899999877665556678899999999999999999999999888 8899999
Q ss_pred EecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCcccccccc-
Q 003963 583 EFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETYL- 661 (783)
Q Consensus 583 E~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~~- 661 (783)
||+++++|.+++.... .+++..++.++.|++.+|.|||+.+ ++|+||+|+||+++.++.++|+|||.+........
T Consensus 81 e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~l~~~l~~lh~~~--~~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~ 157 (260)
T cd06606 81 EYVSGGSLSSLLKKFG-KLPEPVIRKYTRQILEGLAYLHSNG--IVHRDIKGANILVDSDGVVKLADFGCAKRLGDIETG 157 (260)
T ss_pred EecCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCC--ccccCCCHHHEEEcCCCCEEEcccccEEeccccccc
Confidence 9999999999998654 7899999999999999999999988 99999999999999999999999999876655432
Q ss_pred -cccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCC-hHHHHHHhhcccccccCCCCCCHHHHHHH
Q 003963 662 -TTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLN-SMQVIGAVGFMNQRLEIPKDVDPRWAAIV 739 (783)
Q Consensus 662 -~~~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~elltG~~Pf~~~~-~~~~~~~i~~~~~~~~~~~~~s~~l~~LI 739 (783)
......++..|++||.+.+...+.++||||||+++|+|++|..||.... .......+........++..++..+.+||
T Consensus 158 ~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i 237 (260)
T cd06606 158 EGTGSVRGTPYWMAPEVIRGEEYGRAADIWSLGCTVIEMATGKPPWSELGNPMAALYKIGSSGEPPEIPEHLSEEAKDFL 237 (260)
T ss_pred ccccCCCCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchHHHHHhccccCCCcCCCcccCHHHHHHH
Confidence 1334568899999999998889999999999999999999999998766 33333333323445667788899999999
Q ss_pred HHhhhhCCCCCCCHHHHHHHHHHHHHHHh
Q 003963 740 ESCWHSDPQCRPSFQELVDKLRDLQRQYF 768 (783)
Q Consensus 740 ~~cL~~dP~~RPsa~ell~~L~~L~~~~f 768 (783)
.+||..+|.+||++.++ ++|+||
T Consensus 238 ~~~l~~~p~~Rp~~~~l------l~~~~~ 260 (260)
T cd06606 238 RKCLRRDPKKRPTADEL------LQHPFL 260 (260)
T ss_pred HHhCcCChhhCCCHHHH------hhCCCC
Confidence 99999999999999999 566665
No 277
>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1. Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25
Probab=100.00 E-value=2.6e-36 Score=321.19 Aligned_cols=253 Identities=31% Similarity=0.529 Sum_probs=212.4
Q ss_pred cceeEeeeeccCCcEEEEEEEEeC-CceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEeceeecCCceEEEEE
Q 003963 505 EDLTIGEQIGQGSCGTVYHAVWYG-SQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIVTE 583 (783)
Q Consensus 505 ~~y~i~~~LG~G~fG~Vy~a~~~~-~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lV~E 583 (783)
+.|++.+.||+|+||.||+|.+.. ++.||+|++..... ......+.+|+.+++.++||||+++++++..+...|+|||
T Consensus 4 ~~y~~~~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 82 (277)
T cd06642 4 ELFTKLERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEA-EDEIEDIQQEITVLSQCDSPYITRYYGSYLKGTKLWIIME 82 (277)
T ss_pred HHHHHHHHhcCCCCeeEEEEEEcCCCeEEEEEEeccccc-hHHHHHHHHHHHHHHcCCCCccHhhhcccccCCceEEEEE
Confidence 457778899999999999998754 46799998865432 3445688999999999999999999999999999999999
Q ss_pred ecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCcccccccccc
Q 003963 584 FLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETYLTT 663 (783)
Q Consensus 584 ~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~~~~ 663 (783)
|+++++|.+++.. ..+++..+..++.||+.||.|||+++ ++|+||+|+||+++.++.++|+|||++..........
T Consensus 83 ~~~~~~L~~~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~~--ivH~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~~~ 158 (277)
T cd06642 83 YLGGGSALDLLKP--GPLEETYIATILREILKGLDYLHSER--KIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKR 158 (277)
T ss_pred ccCCCcHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHhcCC--eeccCCChheEEEeCCCCEEEccccccccccCcchhh
Confidence 9999999999864 35889999999999999999999988 9999999999999999999999999987654433233
Q ss_pred cCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhcccccccCCCCCCHHHHHHHHHhh
Q 003963 664 KTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAAIVESCW 743 (783)
Q Consensus 664 ~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~l~~LI~~cL 743 (783)
....|+..|+|||.+.+..++.++|+|||||++|+|++|..||...........+. ......++..++..+.+||.+||
T Consensus 159 ~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~li~~~l 237 (277)
T cd06642 159 NTFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNSDLHPMRVLFLIP-KNSPPTLEGQYSKPFKEFVEACL 237 (277)
T ss_pred hcccCcccccCHHHhCcCCCchhhhHHHHHHHHHHHHhCCCCCcccchhhHHhhhh-cCCCCCCCcccCHHHHHHHHHHc
Confidence 34467889999999999889999999999999999999999998766555443332 12233445567889999999999
Q ss_pred hhCCCCCCCHHHHHHHHHHHHHHHhh
Q 003963 744 HSDPQCRPSFQELVDKLRDLQRQYFQ 769 (783)
Q Consensus 744 ~~dP~~RPsa~ell~~L~~L~~~~f~ 769 (783)
..+|.+||++.+++ +|+||+
T Consensus 238 ~~~p~~Rp~~~~il------~~~~~~ 257 (277)
T cd06642 238 NKDPRFRPTAKELL------KHKFIT 257 (277)
T ss_pred cCCcccCcCHHHHH------HhHHHH
Confidence 99999999999994 556664
No 278
>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=2e-38 Score=370.48 Aligned_cols=258 Identities=28% Similarity=0.480 Sum_probs=219.4
Q ss_pred ceeEeeeeccCCcEEEEEEEEeCCc-eEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEeceeecCCceEEEEEe
Q 003963 506 DLTIGEQIGQGSCGTVYHAVWYGSQ-DVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIVTEF 584 (783)
Q Consensus 506 ~y~i~~~LG~G~fG~Vy~a~~~~~~-~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lV~E~ 584 (783)
++.-+.+||.|.||.||-+.+..++ -.|+|-+.-..........+.+|+.+|..|+|||+|++||+-.+.+.++|.|||
T Consensus 1236 rWqrg~~Ig~G~fG~VYtavN~~tGellAvKEI~iq~~~~k~~~~i~eEm~vlE~lnHpNlV~YyGVEvHRekv~IFMEy 1315 (1509)
T KOG4645|consen 1236 RWQRGNFIGGGTFGKVYTAVNLDTGELLAVKEIKIQDSDHKTFKLIAEEMKVLEGLNHPNLVRYYGVEVHREKVYIFMEY 1315 (1509)
T ss_pred eeccccccCCcceeeeEEeecCCccchhhhhhhhcCccccccCcchHHHHHHHHhccCccccccCceeecHHHHHHHHHH
Confidence 5667789999999999999986654 479998876665556667788999999999999999999999999999999999
Q ss_pred cCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCccccccc----
Q 003963 585 LPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETY---- 660 (783)
Q Consensus 585 ~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~---- 660 (783)
|.+|+|.++++. +...++.....+..|++.|++|||++| ||||||||+||+++.+|.+|++|||.|.......
T Consensus 1316 C~~GsLa~ll~~-gri~dE~vt~vyt~qll~gla~LH~~g--IVHRDIK~aNI~Ld~~g~iK~~DFGsa~ki~~~~~~~~ 1392 (1509)
T KOG4645|consen 1316 CEGGSLASLLEH-GRIEDEMVTRVYTKQLLEGLAYLHEHG--IVHRDIKPANILLDFNGLIKYGDFGSAVKIKNNAQTMP 1392 (1509)
T ss_pred hccCcHHHHHHh-cchhhhhHHHHHHHHHHHHHHHHHhcC--ceecCCCccceeeecCCcEEeecccceeEecCchhcCC
Confidence 999999999976 445777777888899999999999999 9999999999999999999999999998765442
Q ss_pred ccccCCCCCCcccCcccccCCC---CCchhHHHHHHHHHHHHHcCCCCCCCCChH-HHHHHhhcccccccCCCCCCHHHH
Q 003963 661 LTTKTGKGTPQWMAPEVLRNEP---SDEKSDVYSFGVILWELATEKIPWDNLNSM-QVIGAVGFMNQRLEIPKDVDPRWA 736 (783)
Q Consensus 661 ~~~~~~~Gt~~Y~aPE~~~~~~---~s~~sDIwSLG~il~elltG~~Pf~~~~~~-~~~~~i~~~~~~~~~~~~~s~~l~ 736 (783)
...+..+||+.|||||++.+.. ...+.||||||||+.||+||+.||.+++.. .....+. +...+.+|..++++-+
T Consensus 1393 ~el~~~~GT~~YMAPEvit~t~~kG~~~A~DiWslGCVVlEM~tGkrPW~~~dne~aIMy~V~-~gh~Pq~P~~ls~~g~ 1471 (1509)
T KOG4645|consen 1393 GELQSMMGTPMYMAPEVITGTKGKGHGGAADIWSLGCVVLEMATGKRPWAELDNEWAIMYHVA-AGHKPQIPERLSSEGR 1471 (1509)
T ss_pred HHHHhhcCCchhcCchhhcccccCCCCcchhhhcccceEEEeecCCCchhhccchhHHHhHHh-ccCCCCCchhhhHhHH
Confidence 2234567999999999998644 578999999999999999999999877653 4555554 5667889999999999
Q ss_pred HHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhcCcC
Q 003963 737 AIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQASRS 773 (783)
Q Consensus 737 ~LI~~cL~~dP~~RPsa~ell~~L~~L~~~~f~~~~~ 773 (783)
+||..||..||+.|+++.|| +.|.|-+..+.
T Consensus 1472 dFle~Cl~~dP~~Rw~~~ql------le~~f~~~~~d 1502 (1509)
T KOG4645|consen 1472 DFLEHCLEQDPKMRWTASQL------LEHAFGKSCTD 1502 (1509)
T ss_pred HHHHHHHhcCchhhhHHHHH------HHhhccccccc
Confidence 99999999999999999999 45565544433
No 279
>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They
Probab=100.00 E-value=6.2e-36 Score=312.46 Aligned_cols=254 Identities=30% Similarity=0.497 Sum_probs=221.1
Q ss_pred ceeEeeeeccCCcEEEEEEEEeC-CceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEeceeecCCceEEEEEe
Q 003963 506 DLTIGEQIGQGSCGTVYHAVWYG-SQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIVTEF 584 (783)
Q Consensus 506 ~y~i~~~LG~G~fG~Vy~a~~~~-~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lV~E~ 584 (783)
+|.+.+.||.|+||.||++.+.. +..|++|++............+.+|+++++.++|||++++++.+......++||||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~lv~e~ 80 (258)
T cd08215 1 KYEIIKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMSEKEREDALNEVKILKKLNHPNIIKYYESFEEKGKLCIVMEY 80 (258)
T ss_pred CceEEeeeccCCCeEEEEEEEcCCCcEEEEEEeecccCChHHHHHHHHHHHHHHhcCCCChhheEEEEecCCEEEEEEEe
Confidence 58899999999999999999864 57899999987766556667888999999999999999999999999999999999
Q ss_pred cCCCCHHHHHhhc---CCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCcccccccc
Q 003963 585 LPRGSLFRLLQRN---TTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETYL 661 (783)
Q Consensus 585 ~~ggsL~~~L~~~---~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~~ 661 (783)
+++++|.+++... ...+++..++.++.+++.||.|||+.+ ++|+||+|+||+++.++.++|+|||++........
T Consensus 81 ~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~--~~H~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~ 158 (258)
T cd08215 81 ADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLHSRK--ILHRDIKPQNIFLTSNGLVKLGDFGISKVLSSTVD 158 (258)
T ss_pred cCCCcHHHHHHHhhccCCCcCHHHHHHHHHHHHHHHHHHHhCC--EecccCChHHeEEcCCCcEEECCccceeecccCcc
Confidence 9999999999764 367999999999999999999999998 99999999999999999999999999876655432
Q ss_pred cccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhcccccccCCCCCCHHHHHHHHH
Q 003963 662 TTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAAIVES 741 (783)
Q Consensus 662 ~~~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~l~~LI~~ 741 (783)
......|++.|+|||.+.+..++.++|+||||+++|+|++|..||...+.......... .....++..++..+.++|.+
T Consensus 159 ~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~i~~ 237 (258)
T cd08215 159 LAKTVVGTPYYLSPELCQNKPYNYKSDIWSLGCVLYELCTLKHPFEGENLLELALKILK-GQYPPIPSQYSSELRNLVSS 237 (258)
T ss_pred eecceeeeecccChhHhccCCCCccccHHHHHHHHHHHHcCCCCCCCCcHHHHHHHHhc-CCCCCCCCCCCHHHHHHHHH
Confidence 33445688999999999998899999999999999999999999988776665555432 23455667889999999999
Q ss_pred hhhhCCCCCCCHHHHHHHHHHHHHHHh
Q 003963 742 CWHSDPQCRPSFQELVDKLRDLQRQYF 768 (783)
Q Consensus 742 cL~~dP~~RPsa~ell~~L~~L~~~~f 768 (783)
||..+|.+||++.++ +.++||
T Consensus 238 ~l~~~p~~Rp~~~~l------l~~~~~ 258 (258)
T cd08215 238 LLQKDPEERPSIAQI------LQSPFI 258 (258)
T ss_pred HcCCChhhCcCHHHH------hcCCCC
Confidence 999999999999999 555664
No 280
>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning
Probab=100.00 E-value=3.9e-36 Score=320.75 Aligned_cols=255 Identities=25% Similarity=0.359 Sum_probs=209.4
Q ss_pred cceeEeeeeccCCcEEEEEEEEeC-CceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEeceeecCCceEEEEE
Q 003963 505 EDLTIGEQIGQGSCGTVYHAVWYG-SQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIVTE 583 (783)
Q Consensus 505 ~~y~i~~~LG~G~fG~Vy~a~~~~-~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lV~E 583 (783)
++|++.++||+|+||.||+|.+.. ++.|++|++............+.+|+++++.++|+||+++++++...+.++++||
T Consensus 1 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e 80 (288)
T cd07833 1 NKYEVLGVVGEGAYGVVLKCRNKATGEIVAIKKFKESEDDEDVKKTALREVKVLRQLRHENIVNLKEAFRRKGRLYLVFE 80 (288)
T ss_pred CceeEEEEecccCCeeEEEEEeCCCCcEEEEehhhhhcccccchhHHHHHHHHHHhcCCCCeeehhheEEECCEEEEEEe
Confidence 479999999999999999999864 5689999987655445556788899999999999999999999999999999999
Q ss_pred ecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCcccccccc-c
Q 003963 584 FLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETYL-T 662 (783)
Q Consensus 584 ~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~~-~ 662 (783)
|++++.|..++. ....+++..++.++.||+.||.|||+.+ |+|+||+|+||+++.++.+||+|||++........ .
T Consensus 81 ~~~~~~l~~~~~-~~~~~~~~~~~~~~~~i~~~l~~LH~~~--i~H~dl~~~ni~~~~~~~~kl~d~g~~~~~~~~~~~~ 157 (288)
T cd07833 81 YVERTLLELLEA-SPGGLPPDAVRSYIWQLLQAIAYCHSHN--IIHRDIKPENILVSESGVLKLCDFGFARALRARPASP 157 (288)
T ss_pred cCCCCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHCC--eecCCCCHHHeEECCCCCEEEEeeecccccCCCcccc
Confidence 998766655554 3456899999999999999999999998 99999999999999999999999999876554432 2
Q ss_pred ccCCCCCCcccCcccccCC-CCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhcccc------------------
Q 003963 663 TKTGKGTPQWMAPEVLRNE-PSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQ------------------ 723 (783)
Q Consensus 663 ~~~~~Gt~~Y~aPE~~~~~-~~s~~sDIwSLG~il~elltG~~Pf~~~~~~~~~~~i~~~~~------------------ 723 (783)
.....++..|+|||++.+. .++.++||||||+++|+|++|++||........+..+.....
T Consensus 158 ~~~~~~~~~~~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (288)
T cd07833 158 LTDYVATRWYRAPELLVGDTNYGKPVDVWAIGCIMAELLDGEPLFPGDSDIDQLYLIQKCLGPLPPSHQELFSSNPRFAG 237 (288)
T ss_pred ccCcccccCCcCCchhcCCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHhhhcccCccccc
Confidence 2345678899999999888 789999999999999999999999986655433322211000
Q ss_pred ------------cccCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHh
Q 003963 724 ------------RLEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYF 768 (783)
Q Consensus 724 ------------~~~~~~~~s~~l~~LI~~cL~~dP~~RPsa~ell~~L~~L~~~~f 768 (783)
....+..++.++.+||++||..+|++||++.++ ++++||
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~i------l~~~~f 288 (288)
T cd07833 238 VAFPEPSQPESLERRYPGKVSSPALDFLKACLRMDPKERLTCDEL------LQHPYF 288 (288)
T ss_pred cccCCCCCcHHHHHhcCCccchHHHHHHHHHhccCchhcccHHHH------hcCCCC
Confidence 001233458899999999999999999999999 566665
No 281
>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a
Probab=100.00 E-value=9.2e-36 Score=321.95 Aligned_cols=261 Identities=24% Similarity=0.357 Sum_probs=213.4
Q ss_pred cceeEeeeeccCCcEEEEEEEEeCC-ceEEEEEEecccCC-HHHHHHHHHHHHHHHhCCCCceeeEeceeecCCceEEEE
Q 003963 505 EDLTIGEQIGQGSCGTVYHAVWYGS-QDVAVKVFSRQEYS-DEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIVT 582 (783)
Q Consensus 505 ~~y~i~~~LG~G~fG~Vy~a~~~~~-~~vAiK~i~~~~~~-~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lV~ 582 (783)
++|++.+.||+|+||.||++.+... +.|++|.+...... ......+.+|+.+++.++||||+++++.+..++.+++||
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (305)
T cd05609 1 EDFETIKLISNGAYGAVYLVRHKETRQRFAMKKINKQNLILRNQIQQVFVERDILTFAENPFVVSMFCSFETKRHLCMVM 80 (305)
T ss_pred CCceEeeEeecCCCeeEEEEEECCCCcEEEEEEeehhhhhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEecCCEEEEEE
Confidence 3689999999999999999998654 67999998765432 234567888999999999999999999999999999999
Q ss_pred EecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCcccccccc-
Q 003963 583 EFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETYL- 661 (783)
Q Consensus 583 E~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~~- 661 (783)
||++|++|.+++... ..+++..+..++.|++.||.|||+++ |+|+||||+||+++.++.++|+|||+++.......
T Consensus 81 e~~~g~~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~--i~H~dl~p~NIll~~~~~~~l~dfg~~~~~~~~~~~ 157 (305)
T cd05609 81 EYVEGGDCATLLKNI-GALPVDMARMYFAETVLALEYLHNYG--IVHRDLKPDNLLITSMGHIKLTDFGLSKIGLMSLTT 157 (305)
T ss_pred ecCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCC--ccccCCchHHEEECCCCCEEEeeCCCccccCcCccc
Confidence 999999999999764 45889999999999999999999998 99999999999999999999999998864211100
Q ss_pred --------------cccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhcccc-ccc
Q 003963 662 --------------TTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQ-RLE 726 (783)
Q Consensus 662 --------------~~~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~elltG~~Pf~~~~~~~~~~~i~~~~~-~~~ 726 (783)
......++..|+|||.+.+..++.++|||||||++|+|++|..||.+....+....+..... .+.
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~ 237 (305)
T cd05609 158 NLYEGHIEKDTREFLDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEELFGQVISDDIEWPE 237 (305)
T ss_pred cccccccccchhhccccCCccCccccCchhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcccCCCC
Confidence 01123578899999999888899999999999999999999999988776665555432221 122
Q ss_pred CCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhcC
Q 003963 727 IPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQAS 771 (783)
Q Consensus 727 ~~~~~s~~l~~LI~~cL~~dP~~RPsa~ell~~L~~L~~~~f~~~ 771 (783)
....+++++.+||.+||+.+|.+||+..++++. +.++||...
T Consensus 238 ~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~l---l~~~~~~~~ 279 (305)
T cd05609 238 GDEALPADAQDLISRLLRQNPLERLGTGGAFEV---KQHRFFLGL 279 (305)
T ss_pred ccccCCHHHHHHHHHHhccChhhccCccCHHHH---HhCccccCC
Confidence 223678999999999999999999986444333 678888553
No 282
>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi
Probab=100.00 E-value=5.6e-36 Score=322.03 Aligned_cols=258 Identities=28% Similarity=0.455 Sum_probs=215.0
Q ss_pred cccceeEeeeeccCCcEEEEEEEEe-CCceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEeceeecCCceEEE
Q 003963 503 LWEDLTIGEQIGQGSCGTVYHAVWY-GSQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIV 581 (783)
Q Consensus 503 ~~~~y~i~~~LG~G~fG~Vy~a~~~-~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lV 581 (783)
...+|++.+.||+|+||.||++... .++.|++|++..... .....+.+|+.+++.++||||+++++++...+..|+|
T Consensus 17 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~--~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv 94 (293)
T cd06647 17 PKKKYTRFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQQQ--PKKELIINEILVMRENKHPNIVNYLDSYLVGDELWVV 94 (293)
T ss_pred chhhceeeeEecCCCCeEEEEEEEcCCCCEEEEEEeccccc--hHHHHHHHHHHHHhhcCCCCeeehhheeeeCCcEEEE
Confidence 3478999999999999999999875 456799999864432 2245678899999999999999999999999999999
Q ss_pred EEecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCcccccccc
Q 003963 582 TEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETYL 661 (783)
Q Consensus 582 ~E~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~~ 661 (783)
|||+++++|.+++.+. .+++..+..++.|++.||.|||+++ ++|+||||+||+++.++.++|+|||++........
T Consensus 95 ~e~~~~~~L~~~~~~~--~l~~~~~~~i~~~l~~al~~LH~~g--i~H~dL~p~Nili~~~~~~kL~dfg~~~~~~~~~~ 170 (293)
T cd06647 95 MEYLAGGSLTDVVTET--CMDEGQIAAVCRECLQALEFLHSNQ--VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQS 170 (293)
T ss_pred EecCCCCcHHHHHhhc--CCCHHHHHHHHHHHHHHHHHHHhCC--EeeccCCHHHEEEcCCCCEEEccCcceeccccccc
Confidence 9999999999999753 4788899999999999999999998 99999999999999999999999998875544332
Q ss_pred cccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhcc-cccccCCCCCCHHHHHHHH
Q 003963 662 TTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFM-NQRLEIPKDVDPRWAAIVE 740 (783)
Q Consensus 662 ~~~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~elltG~~Pf~~~~~~~~~~~i~~~-~~~~~~~~~~s~~l~~LI~ 740 (783)
......|++.|++||.+.+..++.++|+|||||++|+|++|..||...+.......+... ......+..++..+.+||.
T Consensus 171 ~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 250 (293)
T cd06647 171 KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFRDFLN 250 (293)
T ss_pred ccccccCChhhcCchhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChhhheeehhcCCCCCCCCccccCHHHHHHHH
Confidence 333446888999999998888899999999999999999999999876554332222111 1122234457889999999
Q ss_pred HhhhhCCCCCCCHHHHHHHHHHHHHHHhhcCc
Q 003963 741 SCWHSDPQCRPSFQELVDKLRDLQRQYFQASR 772 (783)
Q Consensus 741 ~cL~~dP~~RPsa~ell~~L~~L~~~~f~~~~ 772 (783)
+||..+|.+||++.++ +.|+||+.-+
T Consensus 251 ~~l~~~p~~Rp~~~~i------l~h~~~~~~~ 276 (293)
T cd06647 251 RCLEMDVEKRGSAKEL------LQHPFLKIAK 276 (293)
T ss_pred HHccCChhhCcCHHHH------hcCHHHhcCc
Confidence 9999999999999999 7899998666
No 283
>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut
Probab=100.00 E-value=5.4e-36 Score=318.70 Aligned_cols=255 Identities=31% Similarity=0.529 Sum_probs=210.6
Q ss_pred cceeEeeeeccCCcEEEEEEEEeC-----CceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEeceeec--CCc
Q 003963 505 EDLTIGEQIGQGSCGTVYHAVWYG-----SQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTS--PQR 577 (783)
Q Consensus 505 ~~y~i~~~LG~G~fG~Vy~a~~~~-----~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~--~~~ 577 (783)
++|++.+.||+|+||.||++.+.. +..||+|++...... .....+.+|+.+++.+.||||+++++++.. ...
T Consensus 4 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~-~~~~~~~~ei~~l~~l~~~~i~~~~~~~~~~~~~~ 82 (284)
T cd05038 4 RHLKFIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEE-QHRSDFEREIEILRTLDHENIVKYKGVCEKPGGRS 82 (284)
T ss_pred hhchhheeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccch-HHHHHHHHHHHHHHhCCCCChheEEeeeecCCCCc
Confidence 578888999999999999998642 467999998765543 456788999999999999999999999877 557
Q ss_pred eEEEEEecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCcccc
Q 003963 578 LCIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKH 657 (783)
Q Consensus 578 ~~lV~E~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~ 657 (783)
.+++|||+++++|.+++......+++..++.++.||+.||+|||+++ |+|+||||+||+++.++.++|+|||++....
T Consensus 83 ~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~--i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~ 160 (284)
T cd05038 83 LRLIMEYLPSGSLRDYLQRHRDQINLKRLLLFSSQICKGMDYLGSQR--YIHRDLAARNILVESEDLVKISDFGLAKVLP 160 (284)
T ss_pred eEEEEecCCCCCHHHHHHhCccccCHHHHHHHHHHHHHHHHHHHhCC--eecCCCCHHhEEEcCCCCEEEcccccccccc
Confidence 89999999999999999876667999999999999999999999998 9999999999999999999999999998665
Q ss_pred cccc---cccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHH---------------HHHHhh
Q 003963 658 ETYL---TTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQ---------------VIGAVG 719 (783)
Q Consensus 658 ~~~~---~~~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~elltG~~Pf~~~~~~~---------------~~~~i~ 719 (783)
.... ......++..|++||.+.+..++.++|||||||++|+|++|..||....... ....+
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 239 (284)
T cd05038 161 EDKDYYYVKEPGESPIFWYAPECLRTSKFSSASDVWSFGVTLYELFTYGDPSQSPPAEFLRMIGIAQGQMIVTRLLELL- 239 (284)
T ss_pred cCCcceeccCCCCCcccccCcHHHccCCCCcccchHHHhhhhheeeccCCCcccccchhccccccccccccHHHHHHHH-
Confidence 3211 1112344567999999998889999999999999999999999986432211 11111
Q ss_pred cccccccCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHH
Q 003963 720 FMNQRLEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDL 763 (783)
Q Consensus 720 ~~~~~~~~~~~~s~~l~~LI~~cL~~dP~~RPsa~ell~~L~~L 763 (783)
........+..++.++.+|+.+||..+|.+||++.+++++|+++
T Consensus 240 ~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~i 283 (284)
T cd05038 240 KEGERLPRPPSCPDEVYDLMKLCWEAEPQDRPSFADLILIVDRL 283 (284)
T ss_pred HcCCcCCCCccCCHHHHHHHHHHhccChhhCCCHHHHHHHHhhc
Confidence 11223344566789999999999999999999999999998865
No 284
>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I
Probab=100.00 E-value=3.9e-36 Score=317.70 Aligned_cols=250 Identities=30% Similarity=0.471 Sum_probs=205.4
Q ss_pred cccceeEeeeeccCCcEEEEEEEEeC-CceEEEEEEecccCCHHHHHHHHHHHHHHHhC-CCCceeeEeceeecCC----
Q 003963 503 LWEDLTIGEQIGQGSCGTVYHAVWYG-SQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRL-RHPNVLLFMGAVTSPQ---- 576 (783)
Q Consensus 503 ~~~~y~i~~~LG~G~fG~Vy~a~~~~-~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l-~HpnIv~l~~~~~~~~---- 576 (783)
..++|++.+.||.|+||.||+|.+.. ++.|++|++..... ....+.+|+.+++.+ .|+||+++++++....
T Consensus 4 ~~~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~---~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~ 80 (275)
T cd06608 4 PTGIFELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIED---EEEEIKEEYNILRKYSNHPNIATFYGAFIKKNPPGN 80 (275)
T ss_pred chhheeheeeecCCCCeEEEEEEECCCCcEEEEEEEecCch---hHHHHHHHHHHHHHhcCCCChheEEEEEEecCCCCc
Confidence 35789999999999999999999864 46799999875442 235788999999999 6999999999997644
Q ss_pred --ceEEEEEecCCCCHHHHHhhc---CCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecC
Q 003963 577 --RLCIVTEFLPRGSLFRLLQRN---TTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFG 651 (783)
Q Consensus 577 --~~~lV~E~~~ggsL~~~L~~~---~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFG 651 (783)
.+++||||+++++|.+++... ...+++..+..++.|++.||.|||+.+ ++|+||+|+||+++.++.++|+|||
T Consensus 81 ~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~~--i~H~~l~p~ni~~~~~~~~~l~d~~ 158 (275)
T cd06608 81 DDQLWLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGLAYLHENK--VIHRDIKGQNILLTKNAEVKLVDFG 158 (275)
T ss_pred ceEEEEEEEcCCCCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhcCC--cccCCCCHHHEEEccCCeEEECCCc
Confidence 489999999999999998653 356899999999999999999999998 9999999999999999999999999
Q ss_pred CCcccccccccccCCCCCCcccCcccccC-----CCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccc-ccc
Q 003963 652 LSRLKHETYLTTKTGKGTPQWMAPEVLRN-----EPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMN-QRL 725 (783)
Q Consensus 652 la~~~~~~~~~~~~~~Gt~~Y~aPE~~~~-----~~~s~~sDIwSLG~il~elltG~~Pf~~~~~~~~~~~i~~~~-~~~ 725 (783)
++..............|+..|+|||++.. ..++.++|||||||+||+|++|..||...........+.... ...
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~ 238 (275)
T cd06608 159 VSAQLDSTLGRRNTFIGTPYWMAPEVIACDEQPDASYDARSDVWSLGITAIELADGKPPLCDMHPMRALFKIPRNPPPTL 238 (275)
T ss_pred cceecccchhhhcCccccccccCHhHhcccccccCCccccccHHHhHHHHHHHHhCCCCccccchHHHHHHhhccCCCCC
Confidence 98765544333345568999999998754 345788999999999999999999998765544443332211 122
Q ss_pred cCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHH
Q 003963 726 EIPKDVDPRWAAIVESCWHSDPQCRPSFQELV 757 (783)
Q Consensus 726 ~~~~~~s~~l~~LI~~cL~~dP~~RPsa~ell 757 (783)
..+..++..+.+||.+||..||.+|||+.+++
T Consensus 239 ~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~ll 270 (275)
T cd06608 239 KSPENWSKKFNDFISECLIKNYEQRPFMEELL 270 (275)
T ss_pred CchhhcCHHHHHHHHHHhhcChhhCcCHHHHh
Confidence 22334788999999999999999999999994
No 285
>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte
Probab=100.00 E-value=6.6e-36 Score=316.75 Aligned_cols=254 Identities=29% Similarity=0.544 Sum_probs=207.9
Q ss_pred ceeEeeeeccCCcEEEEEEEEeC-CceEEEEEEecccC--------CHHHHHHHHHHHHHHHhCCCCceeeEeceeecCC
Q 003963 506 DLTIGEQIGQGSCGTVYHAVWYG-SQDVAVKVFSRQEY--------SDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQ 576 (783)
Q Consensus 506 ~y~i~~~LG~G~fG~Vy~a~~~~-~~~vAiK~i~~~~~--------~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~ 576 (783)
+|.+.+.||.|+||.||+|.... ++.||+|.+..... .....+.+..|+.+++.++||||+++++++....
T Consensus 2 ~~~~~~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~ 81 (272)
T cd06629 2 KWVKGELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHLNIVQYLGFETTEE 81 (272)
T ss_pred ceeecceecccCceEEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcCCCCcceEEEEeccCC
Confidence 57889999999999999998754 56799998864321 1123457888999999999999999999999999
Q ss_pred ceEEEEEecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCccc
Q 003963 577 RLCIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLK 656 (783)
Q Consensus 577 ~~~lV~E~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~ 656 (783)
..++||||+++++|.+++... ..+++..+..++.||+.||.|||+++ ++|+||+|+||+++.++.++|+|||++...
T Consensus 82 ~~~lv~e~~~~~~L~~~l~~~-~~l~~~~~~~~~~qi~~~l~~lH~~~--i~H~dl~~~nil~~~~~~~~l~d~~~~~~~ 158 (272)
T cd06629 82 YLSIFLEYVPGGSIGSCLRTY-GRFEEQLVRFFTEQVLEGLAYLHSKG--ILHRDLKADNLLVDADGICKISDFGISKKS 158 (272)
T ss_pred ceEEEEecCCCCcHHHHHhhc-cCCCHHHHHHHHHHHHHHHHHHhhCC--eeecCCChhhEEEcCCCeEEEeeccccccc
Confidence 999999999999999999765 46889999999999999999999998 999999999999999999999999998754
Q ss_pred ccccc--cccCCCCCCcccCcccccCCC--CCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhcccccccCC----
Q 003963 657 HETYL--TTKTGKGTPQWMAPEVLRNEP--SDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLEIP---- 728 (783)
Q Consensus 657 ~~~~~--~~~~~~Gt~~Y~aPE~~~~~~--~s~~sDIwSLG~il~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~~---- 728 (783)
..... ......|+..|+|||.+.... ++.++|+||||+++|+|++|..||...........+........++
T Consensus 159 ~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (272)
T cd06629 159 DDIYDNDQNMSMQGSVFWMAPEVIHSYSQGYSAKVDIWSLGCVVLEMFAGRRPWSDEEAIAAMFKLGNKRSAPPIPPDVS 238 (272)
T ss_pred cccccccccccccCCccccCHHHhccccCCCCccchhHHHHHHHHHHHhCCCCCcCcchHHHHHHhhccccCCcCCcccc
Confidence 43211 122345788999999987654 7889999999999999999999997665554433332222222222
Q ss_pred CCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHh
Q 003963 729 KDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYF 768 (783)
Q Consensus 729 ~~~s~~l~~LI~~cL~~dP~~RPsa~ell~~L~~L~~~~f 768 (783)
..++..+.++|.+||..+|.+||++.++ ++|+||
T Consensus 239 ~~~~~~~~~li~~~l~~~p~~Rps~~~i------l~~~~~ 272 (272)
T cd06629 239 MNLSPVALDFLNACFTINPDNRPTAREL------LQHPFI 272 (272)
T ss_pred ccCCHHHHHHHHHHhcCChhhCCCHHHH------hhCCCC
Confidence 3568899999999999999999999999 556654
No 286
>PLN00009 cyclin-dependent kinase A; Provisional
Probab=100.00 E-value=8.5e-36 Score=319.98 Aligned_cols=259 Identities=25% Similarity=0.358 Sum_probs=208.5
Q ss_pred cceeEeeeeccCCcEEEEEEEEeC-CceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEeceeecCCceEEEEE
Q 003963 505 EDLTIGEQIGQGSCGTVYHAVWYG-SQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIVTE 583 (783)
Q Consensus 505 ~~y~i~~~LG~G~fG~Vy~a~~~~-~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lV~E 583 (783)
++|++.+.||+|+||.||+|.+.. ++.||+|++............+.+|+.+++.++||||+++++++.....+|+|||
T Consensus 2 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 81 (294)
T PLN00009 2 DQYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKRLYLVFE 81 (294)
T ss_pred CceEEEEEecCCCCEEEEEEEecCCCcEEEEEehhhccccccchHHHHHHHHHHHhccCCCEeeEEEEEecCCeEEEEEe
Confidence 579999999999999999999864 5789999986654433444677889999999999999999999999999999999
Q ss_pred ecCCCCHHHHHhhcC-CcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcC-CCcEEEEecCCCcccccccc
Q 003963 584 FLPRGSLFRLLQRNT-TKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDK-HWTVKVGDFGLSRLKHETYL 661 (783)
Q Consensus 584 ~~~ggsL~~~L~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~-~~~vkL~DFGla~~~~~~~~ 661 (783)
|++ ++|.+++.... ..+++..++.++.||+.||+|||+++ |+|+||||+||+++. ++.+||+|||++........
T Consensus 82 ~~~-~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~--i~H~dl~p~nill~~~~~~~kl~dfg~~~~~~~~~~ 158 (294)
T PLN00009 82 YLD-LDLKKHMDSSPDFAKNPRLIKTYLYQILRGIAYCHSHR--VLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVR 158 (294)
T ss_pred ccc-ccHHHHHHhCCCCCcCHHHHHHHHHHHHHHHHHHHhCC--eeCCCCCcceEEEECCCCEEEEcccccccccCCCcc
Confidence 995 58888875433 33678888899999999999999998 999999999999985 56799999999976543322
Q ss_pred cccCCCCCCcccCcccccC-CCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhcccc-----------------
Q 003963 662 TTKTGKGTPQWMAPEVLRN-EPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQ----------------- 723 (783)
Q Consensus 662 ~~~~~~Gt~~Y~aPE~~~~-~~~s~~sDIwSLG~il~elltG~~Pf~~~~~~~~~~~i~~~~~----------------- 723 (783)
......+++.|+|||++.+ ..++.++|||||||++|+|++|.+||...........+.....
T Consensus 159 ~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~i~~~l~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (294)
T PLN00009 159 TFTHEVVTLWYRAPEILLGSRHYSTPVDIWSVGCIFAEMVNQKPLFPGDSEIDELFKIFRILGTPNEETWPGVTSLPDYK 238 (294)
T ss_pred ccccCceeecccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhccccccchhhh
Confidence 2234467889999998876 4578999999999999999999999987665444332211000
Q ss_pred ----c------ccCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhcCc
Q 003963 724 ----R------LEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQASR 772 (783)
Q Consensus 724 ----~------~~~~~~~s~~l~~LI~~cL~~dP~~RPsa~ell~~L~~L~~~~f~~~~ 772 (783)
. ......+++++.++|.+||+.+|++||++.++ +.++||....
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~~------l~~~~~~~~~ 291 (294)
T PLN00009 239 SAFPKWPPKDLATVVPTLEPAGVDLLSKMLRLDPSKRITARAA------LEHEYFKDLG 291 (294)
T ss_pred hhcccCCCCCHHHhCcCCChHHHHHHHHHccCChhhCcCHHHH------hcCchHhHHh
Confidence 0 00123568889999999999999999999999 5689997654
No 287
>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins. Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily
Probab=100.00 E-value=1e-35 Score=321.83 Aligned_cols=257 Identities=32% Similarity=0.456 Sum_probs=213.5
Q ss_pred cccceeEeeeeccCCcEEEEEEEEeC-CceEEEEEEecccC-CHHHHHHHHHHHHHHHhCCCCceeeEeceeecCCceEE
Q 003963 503 LWEDLTIGEQIGQGSCGTVYHAVWYG-SQDVAVKVFSRQEY-SDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCI 580 (783)
Q Consensus 503 ~~~~y~i~~~LG~G~fG~Vy~a~~~~-~~~vAiK~i~~~~~-~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~l 580 (783)
..+.|.+.++||+|+||.||+|.+.. ++.||+|++..... .......+.+|+.+++.++||||+++++++...+..|+
T Consensus 13 ~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~l 92 (307)
T cd06607 13 PEKLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLRHPNTIEYKGCYLREHTAWL 92 (307)
T ss_pred cchhhhhheeecCCCCeEEEEEEEcCCCcEEEEEEEeccccCcHHHHHHHHHHHHHHHhCCCCCEEEEEEEEEeCCeEEE
Confidence 34679999999999999999998754 57899999865433 34455678899999999999999999999999999999
Q ss_pred EEEecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCccccccc
Q 003963 581 VTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETY 660 (783)
Q Consensus 581 V~E~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~ 660 (783)
||||+. |+|.+++......+++..+..++.||+.||.|||+.+ |+|+||+|+||+++.++.++|+|||++......
T Consensus 93 v~e~~~-g~l~~~~~~~~~~l~~~~~~~~~~ql~~~L~~LH~~~--i~H~dl~p~nIl~~~~~~~kL~dfg~~~~~~~~- 168 (307)
T cd06607 93 VMEYCL-GSASDILEVHKKPLQEVEIAAICHGALQGLAYLHSHE--RIHRDIKAGNILLTEPGTVKLADFGSASLVSPA- 168 (307)
T ss_pred EHHhhC-CCHHHHHHHcccCCCHHHHHHHHHHHHHHHHHHHHCC--ceecCCCcccEEECCCCCEEEeecCcceecCCC-
Confidence 999996 5888887665667899999999999999999999998 999999999999999999999999998654322
Q ss_pred ccccCCCCCCcccCccccc---CCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhcccccccCCCCCCHHHHH
Q 003963 661 LTTKTGKGTPQWMAPEVLR---NEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAA 737 (783)
Q Consensus 661 ~~~~~~~Gt~~Y~aPE~~~---~~~~s~~sDIwSLG~il~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~l~~ 737 (783)
....+++.|+|||++. ...++.++||||||+++|+|++|..||...+.......+.........+..++..+.+
T Consensus 169 ---~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~s~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (307)
T cd06607 169 ---NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNDSPTLSSNDWSDYFRN 245 (307)
T ss_pred ---CCccCCccccCceeeeccCCCCCCcccchHHHHHHHHHHHcCCCCCCCccHHHHHHHHhcCCCCCCCchhhCHHHHH
Confidence 2346788999999874 3557889999999999999999999998877665544443222222223457889999
Q ss_pred HHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhcCc
Q 003963 738 IVESCWHSDPQCRPSFQELVDKLRDLQRQYFQASR 772 (783)
Q Consensus 738 LI~~cL~~dP~~RPsa~ell~~L~~L~~~~f~~~~ 772 (783)
+|.+||..+|.+||++.++ +.++||+...
T Consensus 246 li~~~l~~~p~~Rp~~~~i------l~~~~~~~~~ 274 (307)
T cd06607 246 FVDSCLQKIPQDRPSSEEL------LKHRFVLRER 274 (307)
T ss_pred HHHHHhcCChhhCcCHHHH------hcChhhcccC
Confidence 9999999999999999999 5678886544
No 288
>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast
Probab=100.00 E-value=1.2e-35 Score=310.24 Aligned_cols=253 Identities=29% Similarity=0.579 Sum_probs=219.5
Q ss_pred ceeEeeeeccCCcEEEEEEEEeC-CceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEeceeecCCceEEEEEe
Q 003963 506 DLTIGEQIGQGSCGTVYHAVWYG-SQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIVTEF 584 (783)
Q Consensus 506 ~y~i~~~LG~G~fG~Vy~a~~~~-~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lV~E~ 584 (783)
+|++.++||+|++|.||++.+.. ++.|++|.+............+.+|++++..++||||+++++++......+++|||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~ 80 (254)
T cd06627 1 NYQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLKHPNIVKYIGSIETSDSLYIILEY 80 (254)
T ss_pred CceeeeEEcccCCeEEEEEEEcCCCcEEEEEEecccccCHHHHHHHHHHHHHHHhCCCCCccEEEEEEEeCCEEEEEEec
Confidence 58899999999999999998764 56899999987766556678899999999999999999999999999999999999
Q ss_pred cCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCccccccccccc
Q 003963 585 LPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETYLTTK 664 (783)
Q Consensus 585 ~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~~~~~ 664 (783)
+++++|.+++... ..+++..++.++.|++.+|.|||+.+ |+|+||||+||+++.++.++|+|||++...........
T Consensus 81 ~~~~~L~~~~~~~-~~l~~~~~~~~~~~i~~~l~~lH~~~--i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~ 157 (254)
T cd06627 81 AENGSLRQIIKKF-GPFPESLVAVYVYQVLQGLAYLHEQG--VIHRDIKAANILTTKDGVVKLADFGVATKLNDVSKDDA 157 (254)
T ss_pred CCCCcHHHHHHhc-cCCCHHHHHHHHHHHHHHHHHHhhCC--cccCCCCHHHEEECCCCCEEEeccccceecCCCccccc
Confidence 9999999999765 56899999999999999999999998 99999999999999999999999999987655443333
Q ss_pred CCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhcccccccCCCCCCHHHHHHHHHhhh
Q 003963 665 TGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAAIVESCWH 744 (783)
Q Consensus 665 ~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~l~~LI~~cL~ 744 (783)
...++..|++||.+.+...+.++|||+||+++|+|++|..||............. ......++..++..+.++|.+||.
T Consensus 158 ~~~~~~~y~~pe~~~~~~~~~~~Dv~~lG~~l~~l~~g~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~i~~~l~ 236 (254)
T cd06627 158 SVVGTPYWMAPEVIEMSGASTASDIWSLGCTVIELLTGNPPYYDLNPMAALFRIV-QDDHPPLPEGISPELKDFLMQCFQ 236 (254)
T ss_pred ccccchhhcCHhhhcCCCCCcchhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHh-ccCCCCCCCCCCHHHHHHHHHHHh
Confidence 4567899999999988888999999999999999999999998776544443332 234455677889999999999999
Q ss_pred hCCCCCCCHHHHHHHHHHHHHHHh
Q 003963 745 SDPQCRPSFQELVDKLRDLQRQYF 768 (783)
Q Consensus 745 ~dP~~RPsa~ell~~L~~L~~~~f 768 (783)
.+|++||++.++ +.++||
T Consensus 237 ~~p~~R~~~~~~------l~~~~~ 254 (254)
T cd06627 237 KDPNLRPTAKQL------LKHPWI 254 (254)
T ss_pred CChhhCcCHHHH------hcCCCC
Confidence 999999999999 455664
No 289
>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou
Probab=100.00 E-value=7.7e-36 Score=319.01 Aligned_cols=257 Identities=28% Similarity=0.493 Sum_probs=217.7
Q ss_pred cccceeEeeeeccCCcEEEEEEEEe-CCceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEeceeecCCceEEE
Q 003963 503 LWEDLTIGEQIGQGSCGTVYHAVWY-GSQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIV 581 (783)
Q Consensus 503 ~~~~y~i~~~LG~G~fG~Vy~a~~~-~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lV 581 (783)
..+.|++.+.||.|+||.||++.+. .++.|++|++..... ....+.+|+++++.++|+||+++++++......|++
T Consensus 17 ~~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~---~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv 93 (286)
T cd06614 17 PRELYKNLEKIGEGASGEVYKATDRATGKEVAIKKMRLRKQ---NKELIINEILIMKDCKHPNIVDYYDSYLVGDELWVV 93 (286)
T ss_pred ccccchHhHhccCCCCeEEEEEEEccCCcEEEEEEEecCch---hHHHHHHHHHHHHHCCCCCeeEEEEEEEECCEEEEE
Confidence 4567899999999999999999986 467899999876543 346788899999999999999999999999999999
Q ss_pred EEecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCcccccccc
Q 003963 582 TEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETYL 661 (783)
Q Consensus 582 ~E~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~~ 661 (783)
|||+++++|.+++......+++..++.++.|++.||.|||+.| |+|+||+|+||+++.++.++|+|||++........
T Consensus 94 ~e~~~~~~L~~~l~~~~~~l~~~~~~~i~~~i~~~L~~lH~~g--i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~ 171 (286)
T cd06614 94 MEYMDGGSLTDIITQNFVRMNEPQIAYVCREVLQGLEYLHSQN--VIHRDIKSDNILLSKDGSVKLADFGFAAQLTKEKS 171 (286)
T ss_pred EeccCCCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhCC--eeeCCCChhhEEEcCCCCEEECccchhhhhccchh
Confidence 9999999999999876557999999999999999999999988 99999999999999999999999998865543332
Q ss_pred cccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhcccc-cccCCCCCCHHHHHHHH
Q 003963 662 TTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQ-RLEIPKDVDPRWAAIVE 740 (783)
Q Consensus 662 ~~~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~elltG~~Pf~~~~~~~~~~~i~~~~~-~~~~~~~~s~~l~~LI~ 740 (783)
......++..|++||.+.+..++.++|+|||||++|+|++|..||...+.......+..... ....+..++..+.+||.
T Consensus 172 ~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slGvil~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 251 (286)
T cd06614 172 KRNSVVGTPYWMAPEVIKRKDYGPKVDIWSLGIMCIEMAEGEPPYLREPPLRALFLITTKGIPPLKNPEKWSPEFKDFLN 251 (286)
T ss_pred hhccccCCcccCCHhHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCCCcchhhCCHHHHHHHH
Confidence 23344578899999999988899999999999999999999999987776554444322111 22223348899999999
Q ss_pred HhhhhCCCCCCCHHHHHHHHHHHHHHHhhc
Q 003963 741 SCWHSDPQCRPSFQELVDKLRDLQRQYFQA 770 (783)
Q Consensus 741 ~cL~~dP~~RPsa~ell~~L~~L~~~~f~~ 770 (783)
+||+.+|.+||++.++ +.++||+.
T Consensus 252 ~~l~~~p~~Rpt~~~i------l~~~~~~~ 275 (286)
T cd06614 252 KCLVKDPEKRPSAEEL------LQHPFLKK 275 (286)
T ss_pred HHhccChhhCcCHHHH------hhChHhhc
Confidence 9999999999999999 66888865
No 290
>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express
Probab=100.00 E-value=3.6e-36 Score=323.48 Aligned_cols=255 Identities=28% Similarity=0.433 Sum_probs=212.7
Q ss_pred cceeEeeeeccCCcEEEEEEEEeC-CceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEeceeecCCceEEEEE
Q 003963 505 EDLTIGEQIGQGSCGTVYHAVWYG-SQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIVTE 583 (783)
Q Consensus 505 ~~y~i~~~LG~G~fG~Vy~a~~~~-~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lV~E 583 (783)
+.|.....||+|+||.||++.+.. +..||||++.... ......+.+|+.+++.++|+||+++++.+...+..|+|||
T Consensus 22 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~lv~e 99 (292)
T cd06658 22 EYLDSFIKIGEGSTGIVCIATEKHTGKQVAVKKMDLRK--QQRRELLFNEVVIMRDYHHENVVDMYNSYLVGDELWVVME 99 (292)
T ss_pred HHHhhhhcccCCCCeEEEEEEECCCCCEEEEEEEecch--HHHHHHHHHHHHHHHhCCCCcHHHHHHheecCCeEEEEEe
Confidence 455666789999999999998754 5679999886533 2334668899999999999999999999999999999999
Q ss_pred ecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCcccccccccc
Q 003963 584 FLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETYLTT 663 (783)
Q Consensus 584 ~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~~~~ 663 (783)
|+++++|.+++.. ..+++..++.++.||+.||.|||+++ |+||||||+||+++.++.++|+|||++..........
T Consensus 100 ~~~~~~L~~~~~~--~~l~~~~~~~~~~qi~~~l~~LH~~~--ivH~dlkp~Nill~~~~~~kL~dfg~~~~~~~~~~~~ 175 (292)
T cd06658 100 FLEGGALTDIVTH--TRMNEEQIATVCLSVLRALSYLHNQG--VIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEVPKR 175 (292)
T ss_pred CCCCCcHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCC--EeecCCCHHHEEEcCCCCEEEccCcchhhcccccccC
Confidence 9999999998864 34889999999999999999999998 9999999999999999999999999987554333333
Q ss_pred cCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhcc-cccccCCCCCCHHHHHHHHHh
Q 003963 664 KTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFM-NQRLEIPKDVDPRWAAIVESC 742 (783)
Q Consensus 664 ~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~elltG~~Pf~~~~~~~~~~~i~~~-~~~~~~~~~~s~~l~~LI~~c 742 (783)
....|+..|+|||.+.+..++.++|||||||++|+|++|..||...+....+..+... .........++..+.+||.+|
T Consensus 176 ~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~ 255 (292)
T cd06658 176 KSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPPYFNEPPLQAMRRIRDNLPPRVKDSHKVSSVLRGFLDLM 255 (292)
T ss_pred ceeecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCccccccccCHHHHHHHHHH
Confidence 3456889999999999888999999999999999999999999877765554443221 122223345788999999999
Q ss_pred hhhCCCCCCCHHHHHHHHHHHHHHHhhcC
Q 003963 743 WHSDPQCRPSFQELVDKLRDLQRQYFQAS 771 (783)
Q Consensus 743 L~~dP~~RPsa~ell~~L~~L~~~~f~~~ 771 (783)
|..||.+|||+.++ ++++||+..
T Consensus 256 l~~~P~~Rpt~~~i------l~~~~~~~~ 278 (292)
T cd06658 256 LVREPSQRATAQEL------LQHPFLKLA 278 (292)
T ss_pred ccCChhHCcCHHHH------hhChhhhcc
Confidence 99999999999999 678999644
No 291
>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK
Probab=100.00 E-value=7.5e-36 Score=329.74 Aligned_cols=254 Identities=26% Similarity=0.350 Sum_probs=205.4
Q ss_pred cccceeEeeeeccCCcEEEEEEEEe-CCceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEeceeecC------
Q 003963 503 LWEDLTIGEQIGQGSCGTVYHAVWY-GSQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSP------ 575 (783)
Q Consensus 503 ~~~~y~i~~~LG~G~fG~Vy~a~~~-~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~------ 575 (783)
..++|++.+.||+|+||.||++.+. .++.||||++............+.+|+.+++.++||||+++++++...
T Consensus 14 ~~~~y~~~~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 93 (353)
T cd07850 14 VLKRYQNLKPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPFQNVTHAKRAYRELVLMKLVNHKNIIGLLNVFTPQKSLEEF 93 (353)
T ss_pred hhcceEEEEEeccCCCEEEEEEEECCCCCEEEEEecCccccChhHHHHHHHHHHHHHhcCCCCCcceeeeeccCCCcccc
Confidence 4578999999999999999999976 457899999876544445556778899999999999999999988644
Q ss_pred CceEEEEEecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCcc
Q 003963 576 QRLCIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRL 655 (783)
Q Consensus 576 ~~~~lV~E~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~ 655 (783)
...|+||||+. ++|.+.+... ++...+..++.||+.||+|||+++ |+||||||+|||++.++.+||+|||++..
T Consensus 94 ~~~~lv~e~~~-~~l~~~~~~~---l~~~~~~~~~~ql~~aL~~LH~~g--i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~ 167 (353)
T cd07850 94 QDVYLVMELMD-ANLCQVIQMD---LDHERMSYLLYQMLCGIKHLHSAG--IIHRDLKPSNIVVKSDCTLKILDFGLART 167 (353)
T ss_pred CcEEEEEeccC-CCHHHHHhhc---CCHHHHHHHHHHHHHHHHHHHhCC--eeeCCCCHHHEEECCCCCEEEccCcccee
Confidence 35799999995 5888888643 888899999999999999999998 99999999999999999999999999976
Q ss_pred cccccccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhcccc------------
Q 003963 656 KHETYLTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQ------------ 723 (783)
Q Consensus 656 ~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~elltG~~Pf~~~~~~~~~~~i~~~~~------------ 723 (783)
...... .....+++.|+|||.+.+..++.++|||||||++|+|++|+.||...+.......+.....
T Consensus 168 ~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (353)
T cd07850 168 AGTSFM-MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGTVLFPGTDHIDQWNKIIEQLGTPSDEFMSRLQP 246 (353)
T ss_pred CCCCCC-CCCCcccccccCHHHHhCCCCCCchhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhhh
Confidence 554322 2234678999999999999999999999999999999999999986654332222110000
Q ss_pred --------cc---------------------cCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhh
Q 003963 724 --------RL---------------------EIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQ 769 (783)
Q Consensus 724 --------~~---------------------~~~~~~s~~l~~LI~~cL~~dP~~RPsa~ell~~L~~L~~~~f~ 769 (783)
.. ..+...+..+.+||.+||+.||.+||++.++ |.|+||+
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ei------L~~~~~~ 315 (353)
T cd07850 247 TVRNYVENRPKYAGYSFEELFPDVLFPPDSESHNKLKASQARDLLSKMLVIDPEKRISVDDA------LQHPYIN 315 (353)
T ss_pred hhhHHhhcCCCCCCcchhhhCcccccCcccccccccchhHHHHHHHHHcCCChhhCcCHHHH------hcChhHh
Confidence 00 0012346678999999999999999999999 5667664
No 292
>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase. Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm
Probab=100.00 E-value=6e-36 Score=320.87 Aligned_cols=256 Identities=24% Similarity=0.314 Sum_probs=205.2
Q ss_pred cceeEeeeeccCCcEEEEEEEEeC-CceEEEEEEecccCCHHHHHHHHHHHHHHHhCC-CCceeeEeceeecCCc-----
Q 003963 505 EDLTIGEQIGQGSCGTVYHAVWYG-SQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLR-HPNVLLFMGAVTSPQR----- 577 (783)
Q Consensus 505 ~~y~i~~~LG~G~fG~Vy~a~~~~-~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~-HpnIv~l~~~~~~~~~----- 577 (783)
++|++.+.||+|+||.||+|.+.. ++.||||++............+.+|+.+++.+. ||||+++++++.....
T Consensus 1 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~~ 80 (295)
T cd07837 1 DAYEKLEKIGEGTYGKVYKARDKNTGKLVALKKTRLEMDEEGIPPTALREISLLQMLSESIYIVRLLDVEHVEEKNGKPS 80 (295)
T ss_pred CCceEeeEecccCCeEEEEEEECCCCcEEEEEeehhhccccCCchHHHHHHHHHHHccCCCCccceeeeEeecCCCCCce
Confidence 468999999999999999999864 578999998665433333456788999999995 6999999999877665
Q ss_pred eEEEEEecCCCCHHHHHhhc----CCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcC-CCcEEEEecCC
Q 003963 578 LCIVTEFLPRGSLFRLLQRN----TTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDK-HWTVKVGDFGL 652 (783)
Q Consensus 578 ~~lV~E~~~ggsL~~~L~~~----~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~-~~~vkL~DFGl 652 (783)
.|+||||+++ +|.+++... ...+++..++.++.||+.||.|||+++ |+||||||+||+++. ++.+||+|||+
T Consensus 81 ~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~--i~H~dl~~~nil~~~~~~~~kl~dfg~ 157 (295)
T cd07837 81 LYLVFEYLDS-DLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCHKHG--VMHRDLKPQNLLVDKQKGLLKIADLGL 157 (295)
T ss_pred EEEEeeccCc-CHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHHCC--eeecCCChHHEEEecCCCeEEEeeccc
Confidence 8999999975 898888643 235799999999999999999999998 999999999999998 88999999999
Q ss_pred CcccccccccccCCCCCCcccCcccccC-CCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccccc-------
Q 003963 653 SRLKHETYLTTKTGKGTPQWMAPEVLRN-EPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQR------- 724 (783)
Q Consensus 653 a~~~~~~~~~~~~~~Gt~~Y~aPE~~~~-~~~s~~sDIwSLG~il~elltG~~Pf~~~~~~~~~~~i~~~~~~------- 724 (783)
+..............+++.|+|||++.+ ..++.++|||||||++|+|++|..||...+.......+......
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (295)
T cd07837 158 GRAFSIPVKSYTHEIVTLWYRAPEVLLGSTHYSTPVDIWSVGCIFAEMSRKQPLFPGDSELQQLLHIFKLLGTPTEQVWP 237 (295)
T ss_pred ceecCCCccccCCcccccCCCChHHhhCCCCCCchHHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHhCCCChhhCc
Confidence 8755433322333456889999998865 45789999999999999999999999876655443322110000
Q ss_pred -------------------ccCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhh
Q 003963 725 -------------------LEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQ 769 (783)
Q Consensus 725 -------------------~~~~~~~s~~l~~LI~~cL~~dP~~RPsa~ell~~L~~L~~~~f~ 769 (783)
....+.++.++.+||.+||..||.+||++.++ +.|+||+
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~R~~~~ei------l~~~~~~ 295 (295)
T cd07837 238 GVSKLRDWHEFPQWKPQDLSRAVPDLSPEGLDLLQKMLRYDPAKRISAKAA------LTHPYFD 295 (295)
T ss_pred chhhccchhhcCcccchhHHHhccccCHHHHHHHHHHccCChhhcCCHHHH------hcCCCcC
Confidence 00113578899999999999999999999999 6778875
No 293
>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int
Probab=100.00 E-value=1.9e-35 Score=314.70 Aligned_cols=253 Identities=31% Similarity=0.538 Sum_probs=214.6
Q ss_pred ceeEeeeeccCCcEEEEEEEEeC-CceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEeceeecCCceEEEEEe
Q 003963 506 DLTIGEQIGQGSCGTVYHAVWYG-SQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIVTEF 584 (783)
Q Consensus 506 ~y~i~~~LG~G~fG~Vy~a~~~~-~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lV~E~ 584 (783)
-|++.++||.|+||.||++.+.. +..||||++..... ......+.+|+.++..++||||+++++++..+...|+||||
T Consensus 5 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~~~-~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 83 (277)
T cd06641 5 LFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEA-EDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEY 83 (277)
T ss_pred hhhhheeEeecCCeEEEEEEECCCCcEEEEEEeccccc-hHHHHHHHHHHHHHHhcCCCCEeEEEEEEEeCCeEEEEEEe
Confidence 47788999999999999998754 56799998765433 34456788999999999999999999999999999999999
Q ss_pred cCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCccccccccccc
Q 003963 585 LPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETYLTTK 664 (783)
Q Consensus 585 ~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~~~~~ 664 (783)
+++++|.+++... .+++..+..++.|++.+|.|||+.+ ++|+||||.||+++.++.++|+|||++...........
T Consensus 84 ~~~~~l~~~i~~~--~~~~~~~~~~~~~l~~~l~~lh~~~--i~h~dl~p~Ni~i~~~~~~~l~dfg~~~~~~~~~~~~~ 159 (277)
T cd06641 84 LGGGSALDLLEPG--PLDETQIATILREILKGLDYLHSEK--KIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRN 159 (277)
T ss_pred CCCCcHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHccCC--eecCCCCHHhEEECCCCCEEEeecccceecccchhhhc
Confidence 9999999998743 5889999999999999999999988 99999999999999999999999999876544322233
Q ss_pred CCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhcccccccCCCCCCHHHHHHHHHhhh
Q 003963 665 TGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAAIVESCWH 744 (783)
Q Consensus 665 ~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~l~~LI~~cL~ 744 (783)
...++..|+|||.+.+..++.++|+|||||++|+|++|..||...........+. ......++..++.++.++|.+||.
T Consensus 160 ~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~i~~~l~ 238 (277)
T cd06641 160 TFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELAKGEPPHSELHPMKVLFLIP-KNNPPTLEGNYSKPLKEFVEACLN 238 (277)
T ss_pred cccCCccccChhhhccCCCCchhhHHHHHHHHHHHHcCCCCCCccchHHHHHHHh-cCCCCCCCcccCHHHHHHHHHHcc
Confidence 4467889999999988888999999999999999999999998777655554442 223344566788999999999999
Q ss_pred hCCCCCCCHHHHHHHHHHHHHHHhhc
Q 003963 745 SDPQCRPSFQELVDKLRDLQRQYFQA 770 (783)
Q Consensus 745 ~dP~~RPsa~ell~~L~~L~~~~f~~ 770 (783)
.+|.+||++.++ ++|+||+.
T Consensus 239 ~~p~~Rp~~~~~------l~~~~~~~ 258 (277)
T cd06641 239 KEPSFRPTAKEL------LKHKFIVR 258 (277)
T ss_pred CChhhCcCHHHH------HhCHHHhh
Confidence 999999999999 55677754
No 294
>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt
Probab=100.00 E-value=8.1e-36 Score=317.64 Aligned_cols=238 Identities=22% Similarity=0.403 Sum_probs=195.1
Q ss_pred eeccCCcEEEEEEEEeCC-------------------------ceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCcee
Q 003963 512 QIGQGSCGTVYHAVWYGS-------------------------QDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVL 566 (783)
Q Consensus 512 ~LG~G~fG~Vy~a~~~~~-------------------------~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv 566 (783)
+||+|+||.||+|..... ..|++|++.... ......+.+|+.+++.++||||+
T Consensus 2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~--~~~~~~~~~~~~~~~~l~h~niv 79 (274)
T cd05076 2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPSH--RDIALAFFETASLMSQVSHIHLA 79 (274)
T ss_pred CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChHH--HHHHHHHHHHHHHHhcCCCCCee
Confidence 699999999999974211 247888875432 23456788899999999999999
Q ss_pred eEeceeecCCceEEEEEecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCC---
Q 003963 567 LFMGAVTSPQRLCIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHW--- 643 (783)
Q Consensus 567 ~l~~~~~~~~~~~lV~E~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~--- 643 (783)
++++++......++||||+++++|..++......+++..+..++.||+.||+|||+.+ |+||||||+|||++..+
T Consensus 80 ~~~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~--iiH~dlkp~Nill~~~~~~~ 157 (274)
T cd05076 80 FVHGVCVRGSENIMVEEFVEHGPLDVCLRKEKGRVPVAWKITVAQQLASALSYLEDKN--LVHGNVCAKNILLARLGLAE 157 (274)
T ss_pred eEEEEEEeCCceEEEEecCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCC--ccCCCCCcccEEEeccCccc
Confidence 9999999999999999999999999999776667899999999999999999999988 99999999999997643
Q ss_pred ----cEEEEecCCCcccccccccccCCCCCCcccCcccccC-CCCCchhHHHHHHHHHHHHH-cCCCCCCCCChHHHHHH
Q 003963 644 ----TVKVGDFGLSRLKHETYLTTKTGKGTPQWMAPEVLRN-EPSDEKSDVYSFGVILWELA-TEKIPWDNLNSMQVIGA 717 (783)
Q Consensus 644 ----~vkL~DFGla~~~~~~~~~~~~~~Gt~~Y~aPE~~~~-~~~s~~sDIwSLG~il~ell-tG~~Pf~~~~~~~~~~~ 717 (783)
.+||+|||++...... ....++..|+|||.+.+ ..++.++|||||||++|||+ +|..||...........
T Consensus 158 ~~~~~~kl~d~g~~~~~~~~----~~~~~~~~~~aPe~~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~ 233 (274)
T cd05076 158 GTSPFIKLSDPGVSFTALSR----EERVERIPWIAPECVPGGNSLSTAADKWSFGTTLLEICFDGEVPLKERTPSEKERF 233 (274)
T ss_pred CccceeeecCCccccccccc----cccccCCcccCchhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCccccChHHHHHH
Confidence 4899999987543221 23356788999998875 55799999999999999985 79999987765544332
Q ss_pred hhcccccccCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHH
Q 003963 718 VGFMNQRLEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKL 760 (783)
Q Consensus 718 i~~~~~~~~~~~~~s~~l~~LI~~cL~~dP~~RPsa~ell~~L 760 (783)
. .....++...++.+.++|.+||..+|.+||++.++++.|
T Consensus 234 ~---~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~il~~L 273 (274)
T cd05076 234 Y---EKKHRLPEPSCKELATLISQCLTYEPTQRPSFRTILRDL 273 (274)
T ss_pred H---HhccCCCCCCChHHHHHHHHHcccChhhCcCHHHHHHhh
Confidence 2 223344555678999999999999999999999998876
No 295
>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom
Probab=100.00 E-value=1.2e-35 Score=314.00 Aligned_cols=239 Identities=21% Similarity=0.409 Sum_probs=194.7
Q ss_pred eeeccCCcEEEEEEEEeCC-------------ceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEeceeecCCc
Q 003963 511 EQIGQGSCGTVYHAVWYGS-------------QDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQR 577 (783)
Q Consensus 511 ~~LG~G~fG~Vy~a~~~~~-------------~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~ 577 (783)
+.||+|+||.||+|..... ..|++|++.... ......+.+|+.++..++||||+++++++..+..
T Consensus 1 ~~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~--~~~~~~~~~~~~~l~~l~hp~iv~~~~~~~~~~~ 78 (262)
T cd05077 1 EHLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSH--RDISLAFFETASMMRQVSHKHIVLLYGVCVRDVE 78 (262)
T ss_pred CccccCCcceEeeeecccCCCccccccchhhceeEEEeecChhh--hhHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCC
Confidence 3689999999999975321 247888865432 3345678889999999999999999999999999
Q ss_pred eEEEEEecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCc-------EEEEec
Q 003963 578 LCIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWT-------VKVGDF 650 (783)
Q Consensus 578 ~~lV~E~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~-------vkL~DF 650 (783)
.+++|||+++++|..++......+++..++.++.||+.||+|||+.+ |+||||||+|||++.++. ++++||
T Consensus 79 ~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~--ivH~dlkp~Nill~~~~~~~~~~~~~~l~d~ 156 (262)
T cd05077 79 NIMVEEFVEFGPLDLFMHRKSDVLTTPWKFKVAKQLASALSYLEDKD--LVHGNVCTKNILLAREGIDGECGPFIKLSDP 156 (262)
T ss_pred CEEEEecccCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhCC--eECCCCCcccEEEecCCccCCCCceeEeCCC
Confidence 99999999999999998766667899999999999999999999998 999999999999987654 899999
Q ss_pred CCCcccccccccccCCCCCCcccCccccc-CCCCCchhHHHHHHHHHHHHH-cCCCCCCCCChHHHHHHhhcccccccCC
Q 003963 651 GLSRLKHETYLTTKTGKGTPQWMAPEVLR-NEPSDEKSDVYSFGVILWELA-TEKIPWDNLNSMQVIGAVGFMNQRLEIP 728 (783)
Q Consensus 651 Gla~~~~~~~~~~~~~~Gt~~Y~aPE~~~-~~~~s~~sDIwSLG~il~ell-tG~~Pf~~~~~~~~~~~i~~~~~~~~~~ 728 (783)
|++...... ....++..|+|||++. +..++.++|||||||++|+|+ .|..||......+.... ........
T Consensus 157 g~~~~~~~~----~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~~---~~~~~~~~ 229 (262)
T cd05077 157 GIPITVLSR----QECVERIPWIAPECVEDSKNLSIAADKWSFGTTLWEICYNGEIPLKDKTLAEKERF---YEGQCMLV 229 (262)
T ss_pred CCCccccCc----ccccccccccChhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcchhHHHHH---HhcCccCC
Confidence 988654322 2345788999999886 566889999999999999998 58999977654433221 11222333
Q ss_pred CCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHH
Q 003963 729 KDVDPRWAAIVESCWHSDPQCRPSFQELVDKL 760 (783)
Q Consensus 729 ~~~s~~l~~LI~~cL~~dP~~RPsa~ell~~L 760 (783)
...++++.+||.+||+.||.+||++.+|++.|
T Consensus 230 ~~~~~~~~~li~~cl~~dp~~Rp~~~~il~~~ 261 (262)
T cd05077 230 TPSCKELADLMTHCMNYDPNQRPFFRAIMRDI 261 (262)
T ss_pred CCChHHHHHHHHHHcCCChhhCcCHHHHHHhc
Confidence 44568899999999999999999999998765
No 296
>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.
Probab=100.00 E-value=1.6e-35 Score=313.34 Aligned_cols=253 Identities=25% Similarity=0.423 Sum_probs=210.4
Q ss_pred ceeEeeeeccCCcEEEEEEEEeC--CceEEEEEEeccc--------CCHHHHHHHHHHHHHHHh-CCCCceeeEeceeec
Q 003963 506 DLTIGEQIGQGSCGTVYHAVWYG--SQDVAVKVFSRQE--------YSDEVIHSFRQEVSLMKR-LRHPNVLLFMGAVTS 574 (783)
Q Consensus 506 ~y~i~~~LG~G~fG~Vy~a~~~~--~~~vAiK~i~~~~--------~~~~~~~~~~~Ei~il~~-l~HpnIv~l~~~~~~ 574 (783)
.|++.+.||+|+||.||++.+.. ++.+|+|.+.... ........+.+|+.++.. ++||||+++++++..
T Consensus 1 ~y~~~~~ig~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~ 80 (269)
T cd08528 1 EYAVLEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIVRYYKTFLE 80 (269)
T ss_pred CchhhhhhcCCCCceEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCeeeEEeeEcc
Confidence 47888999999999999999866 4679999875432 223445667788888865 799999999999999
Q ss_pred CCceEEEEEecCCCCHHHHHhh---cCCcchHHHHHHHHHHHHHHHHHHHh-CCCCEEecCCCCCCEEEcCCCcEEEEec
Q 003963 575 PQRLCIVTEFLPRGSLFRLLQR---NTTKLDWRRRILMALDIARGVSYLHH-CNPPIIHRDLKSSNLLVDKHWTVKVGDF 650 (783)
Q Consensus 575 ~~~~~lV~E~~~ggsL~~~L~~---~~~~l~~~~~~~i~~qi~~aL~~LH~-~~~~IvHrDIKp~NILl~~~~~vkL~DF 650 (783)
++..+++|||+++++|.+++.. ....+++..++.++.|++.+|.|||+ .+ |+|+||||+||+++.++.++|+||
T Consensus 81 ~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~--i~H~dl~~~nil~~~~~~~~l~df 158 (269)
T cd08528 81 NDRLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLHKEKR--IVHRDLTPNNIMLGEDDKVTITDF 158 (269)
T ss_pred CCeEEEEEecCCCCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHhccCCc--eeecCCCHHHEEECCCCcEEEecc
Confidence 9999999999999999988743 34568999999999999999999996 56 999999999999999999999999
Q ss_pred CCCcccccccccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhcccccccCCCC
Q 003963 651 GLSRLKHETYLTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLEIPKD 730 (783)
Q Consensus 651 Gla~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~ 730 (783)
|++....... ......|+..|++||.+.+..++.++|+||||+++|+|++|+.||...........+............
T Consensus 159 g~~~~~~~~~-~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~ll~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (269)
T cd08528 159 GLAKQKQPES-KLTSVVGTILYSCPEIVKNEPYGEKADVWAFGCILYQMCTLQPPFYSTNMLSLATKIVEAVYEPLPEGM 237 (269)
T ss_pred cceeeccccc-ccccccCcccCcChhhhcCCCCchHHHHHHHHHHHHHHHhCCCcccccCHHHHHHHHhhccCCcCCccc
Confidence 9987654432 233456889999999999988999999999999999999999999877766555554322222222336
Q ss_pred CCHHHHHHHHHhhhhCCCCCCCHHHHHHHHH
Q 003963 731 VDPRWAAIVESCWHSDPQCRPSFQELVDKLR 761 (783)
Q Consensus 731 ~s~~l~~LI~~cL~~dP~~RPsa~ell~~L~ 761 (783)
+++.+.+||.+||+.||.+||++.++..+++
T Consensus 238 ~~~~l~~li~~cl~~~p~~Rp~~~e~~~~~~ 268 (269)
T cd08528 238 YSEDVTDVITSCLTPDAEARPDIIQVSAMIS 268 (269)
T ss_pred CCHHHHHHHHHHCCCCCccCCCHHHHHHHhc
Confidence 7899999999999999999999999988874
No 297
>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as
Probab=100.00 E-value=4.6e-36 Score=325.39 Aligned_cols=246 Identities=25% Similarity=0.375 Sum_probs=189.0
Q ss_pred eeeeccCCcEEEEEEEEeC---CceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEeceeec--CCceEEEEEe
Q 003963 510 GEQIGQGSCGTVYHAVWYG---SQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTS--PQRLCIVTEF 584 (783)
Q Consensus 510 ~~~LG~G~fG~Vy~a~~~~---~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~--~~~~~lV~E~ 584 (783)
+.+||+|+||.||+|.+.. ...||+|.+...... ..+.+|+.+++.++||||+++++++.. +..+++||||
T Consensus 6 g~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~~~~----~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~ 81 (317)
T cd07867 6 GCKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTGIS----MSACREIALLRELKHPNVIALQKVFLSHSDRKVWLLFDY 81 (317)
T ss_pred ceEeccCCCeeEEEEEecCCCccceEEEEEecCCCCc----HHHHHHHHHHHhCCCCCeeeEEEEEeccCCCeEEEEEee
Confidence 4689999999999998754 357999998755432 346789999999999999999998853 5678999999
Q ss_pred cCCCCHHHHHhhc--------CCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEE----cCCCcEEEEecCC
Q 003963 585 LPRGSLFRLLQRN--------TTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLV----DKHWTVKVGDFGL 652 (783)
Q Consensus 585 ~~ggsL~~~L~~~--------~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl----~~~~~vkL~DFGl 652 (783)
+. ++|.+++... ...+++..++.++.||+.||.|||+.+ |+||||||+|||+ +.++.+||+|||+
T Consensus 82 ~~-~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~--ivH~Dlkp~Nil~~~~~~~~~~~kl~DfG~ 158 (317)
T cd07867 82 AE-HDLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLHANW--VLHRDLKPANILVMGEGPERGRVKIADMGF 158 (317)
T ss_pred eC-CcHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCC--EEcCCCCHHHEEEccCCCCCCcEEEeeccc
Confidence 95 5888877421 234788899999999999999999998 9999999999999 4667999999999
Q ss_pred Ccccccccc---cccCCCCCCcccCcccccCC-CCCchhHHHHHHHHHHHHHcCCCCCCCCChH----------HHHHHh
Q 003963 653 SRLKHETYL---TTKTGKGTPQWMAPEVLRNE-PSDEKSDVYSFGVILWELATEKIPWDNLNSM----------QVIGAV 718 (783)
Q Consensus 653 a~~~~~~~~---~~~~~~Gt~~Y~aPE~~~~~-~~s~~sDIwSLG~il~elltG~~Pf~~~~~~----------~~~~~i 718 (783)
++....... ......||+.|+|||++.+. .++.++|||||||++|+|+||.+||...... ......
T Consensus 159 a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~ 238 (317)
T cd07867 159 ARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPFHHDQLDRIF 238 (317)
T ss_pred eeccCCCcccccccCcceecccccCcHHhcCCCccCcHHHHHhHHHHHHHHHhCCCCcccccccccccccccHHHHHHHH
Confidence 976543321 12234689999999998774 5789999999999999999999999643211 000000
Q ss_pred hccc-------------------------cc----------ccCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHH
Q 003963 719 GFMN-------------------------QR----------LEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDL 763 (783)
Q Consensus 719 ~~~~-------------------------~~----------~~~~~~~s~~l~~LI~~cL~~dP~~RPsa~ell~~L~~L 763 (783)
.... .. .......+..+.+||.+||..||.+|||+.++ |
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dP~~R~t~~e~------l 312 (317)
T cd07867 239 SVMGFPADKDWEDIRKMPEYPTLQKDFRRTTYANSSLIKYMEKHKVKPDSKVFLLLQKLLTMDPTKRITSEQA------L 312 (317)
T ss_pred HhcCCCChhhhhhhhhcccchhhhhhhcccccCCchhhhhhhcccCCCChHHHHHHHHHhccCcccccCHHHH------h
Confidence 0000 00 00111245678899999999999999999999 6
Q ss_pred HHHHh
Q 003963 764 QRQYF 768 (783)
Q Consensus 764 ~~~~f 768 (783)
+|+||
T Consensus 313 ~hp~f 317 (317)
T cd07867 313 QDPYF 317 (317)
T ss_pred cCCCC
Confidence 77876
No 298
>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina
Probab=100.00 E-value=2.1e-35 Score=312.59 Aligned_cols=246 Identities=30% Similarity=0.508 Sum_probs=195.7
Q ss_pred eeeccCCcEEEEEEEEeCC---ceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEeceeecCCceEEEEEecCC
Q 003963 511 EQIGQGSCGTVYHAVWYGS---QDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIVTEFLPR 587 (783)
Q Consensus 511 ~~LG~G~fG~Vy~a~~~~~---~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lV~E~~~g 587 (783)
+.||+|+||.||+|..... ..+++|.+.... .......+.+|+.+++.++||||+++++++.....+|+||||+++
T Consensus 1 ~~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~~-~~~~~~~~~~e~~~~~~l~h~nii~~~~~~~~~~~~~lv~e~~~~ 79 (269)
T cd05042 1 DEIGNGWFGKVLLGEAHRGMSKARVVVKELRASA-TPDEQLLFLQEVQPYRELNHPNVLQCLGQCIESIPYLLVLEFCPL 79 (269)
T ss_pred CcCCccCCceEEEEEEecCCCCeEEEEeecCccC-ChHHHHHHHHHHHHHHhCCCCCcceEEEEECCCCceEEEEEeCCC
Confidence 3689999999999975433 357888765433 334456788899999999999999999999999999999999999
Q ss_pred CCHHHHHhhcCC----cchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCcccccc--cc
Q 003963 588 GSLFRLLQRNTT----KLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHET--YL 661 (783)
Q Consensus 588 gsL~~~L~~~~~----~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~~~--~~ 661 (783)
|+|.+++..... ..++..++.++.||+.||+|||+++ |+||||||+|||++.++.+||+|||++...... ..
T Consensus 80 g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~--ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~~~ 157 (269)
T cd05042 80 GDLKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLHQAD--FIHSDLALRNCQLTADLSVKIGDYGLALEQYPEDYYI 157 (269)
T ss_pred CcHHHHHHhccccccccccHHHHHHHHHHHHHHHHHHHhcC--EecccccHhheEecCCCcEEEeccccccccccchhee
Confidence 999999976432 2457778899999999999999998 999999999999999999999999998643221 11
Q ss_pred cccCCCCCCcccCcccccC-------CCCCchhHHHHHHHHHHHHHc-CCCCCCCCChHHHHHHhhcccc----cccCCC
Q 003963 662 TTKTGKGTPQWMAPEVLRN-------EPSDEKSDVYSFGVILWELAT-EKIPWDNLNSMQVIGAVGFMNQ----RLEIPK 729 (783)
Q Consensus 662 ~~~~~~Gt~~Y~aPE~~~~-------~~~s~~sDIwSLG~il~ellt-G~~Pf~~~~~~~~~~~i~~~~~----~~~~~~ 729 (783)
......++..|+|||++.. ..++.++|||||||++|+|++ |..||........+..+..... ...++.
T Consensus 158 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (269)
T cd05042 158 TKDCHAVPLRWLAPELVEIRGQDLLPKDQTKKSNIWSLGVTMWELFTAADQPYPDLSDEQVLKQVVREQDIKLPKPQLDL 237 (269)
T ss_pred ccCCCCCcccccCHHHHhhccccccccccchhhHHHHHHHHHHHHHhCCCCCCCcCCHHHHHHHHhhccCccCCCCcccc
Confidence 2223345778999998743 456789999999999999999 8899988776554444322111 223445
Q ss_pred CCCHHHHHHHHHhhhhCCCCCCCHHHHHHHH
Q 003963 730 DVDPRWAAIVESCWHSDPQCRPSFQELVDKL 760 (783)
Q Consensus 730 ~~s~~l~~LI~~cL~~dP~~RPsa~ell~~L 760 (783)
.+++.+.+++..|| .||.+||++.+|++.|
T Consensus 238 ~~~~~~~~~~~~~~-~dp~~Rpt~~~v~~~l 267 (269)
T cd05042 238 KYSDRWYEVMQFCW-LDPETRPTAEEVHELL 267 (269)
T ss_pred cCCHHHHHHHHHHh-cCcccccCHHHHHHHh
Confidence 68899999999999 5999999999998775
No 299
>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros. Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male
Probab=100.00 E-value=7.9e-36 Score=315.37 Aligned_cols=247 Identities=32% Similarity=0.583 Sum_probs=205.5
Q ss_pred eeeccCCcEEEEEEEEeCC-------ceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEeceeecCCceEEEEE
Q 003963 511 EQIGQGSCGTVYHAVWYGS-------QDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIVTE 583 (783)
Q Consensus 511 ~~LG~G~fG~Vy~a~~~~~-------~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lV~E 583 (783)
+.||+|+||.||+|.+... ..|+||.+.... .......+.+|+.+++.++||||+++++++......++|||
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e 79 (269)
T cd05044 1 NFLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGA-TDQEKKEFLKEAHLMSNFNHPNIVKLLGVCLLNEPQYIIME 79 (269)
T ss_pred CccccccceeEEeeeecccccCcccceeehhhhhhccc-chhhHHHHHHHHHHHHhcCCCCeeeEeeeecCCCCeEEEEe
Confidence 3689999999999986532 468999876543 23345678889999999999999999999999999999999
Q ss_pred ecCCCCHHHHHhhc------CCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCC-----cEEEEecCC
Q 003963 584 FLPRGSLFRLLQRN------TTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHW-----TVKVGDFGL 652 (783)
Q Consensus 584 ~~~ggsL~~~L~~~------~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~-----~vkL~DFGl 652 (783)
|+++++|.+++... ...+++..++.++.||+.||.|||+.+ ++|+||||+||+++.++ .++|+|||+
T Consensus 80 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~--i~H~dl~p~nil~~~~~~~~~~~~~l~dfg~ 157 (269)
T cd05044 80 LMEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLEQMH--FIHRDLAARNCLVSEKGYDADRVVKIGDFGL 157 (269)
T ss_pred ccCCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHHhCC--cccCCCChheEEEecCCCCCCcceEECCccc
Confidence 99999999999642 234788899999999999999999988 99999999999999877 899999999
Q ss_pred Cccccccc--ccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCChHHHHHHhhcccccccCCC
Q 003963 653 SRLKHETY--LTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELAT-EKIPWDNLNSMQVIGAVGFMNQRLEIPK 729 (783)
Q Consensus 653 a~~~~~~~--~~~~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~~~~~ 729 (783)
+....... .......++..|+|||.+.+..++.++|||||||++|+|++ |..||...+..+....+. .......+.
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~ellt~g~~p~~~~~~~~~~~~~~-~~~~~~~~~ 236 (269)
T cd05044 158 ARDIYKSDYYRKEGEGLLPVRWMAPESLLDGKFTTQSDVWSFGVLMWEILTLGQQPYPALNNQEVLQHVT-AGGRLQKPE 236 (269)
T ss_pred ccccccccccccCcccCCCccccCHHHHccCCcccchhHHHHHHHHHHHHHcCCCCCcccCHHHHHHHHh-cCCccCCcc
Confidence 87543221 11123345788999999999999999999999999999998 999998877666554442 233455667
Q ss_pred CCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHH
Q 003963 730 DVDPRWAAIVESCWHSDPQCRPSFQELVDKLR 761 (783)
Q Consensus 730 ~~s~~l~~LI~~cL~~dP~~RPsa~ell~~L~ 761 (783)
.++..+.+||.+||..+|.+||++.++++.|.
T Consensus 237 ~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~ 268 (269)
T cd05044 237 NCPDKIYQLMTNCWAQDPSERPTFDRIQEILQ 268 (269)
T ss_pred cchHHHHHHHHHHcCCCcccCCCHHHHHHHHh
Confidence 78999999999999999999999999988875
No 300
>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess
Probab=100.00 E-value=1.1e-35 Score=318.80 Aligned_cols=254 Identities=26% Similarity=0.357 Sum_probs=201.5
Q ss_pred cceeEeeeeccCCcEEEEEEEEeC-CceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEeceeecCCceEEEEE
Q 003963 505 EDLTIGEQIGQGSCGTVYHAVWYG-SQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIVTE 583 (783)
Q Consensus 505 ~~y~i~~~LG~G~fG~Vy~a~~~~-~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lV~E 583 (783)
++|++.+.||+|+||.||+|.+.. ++.|++|++...... .....+.+|+.+++.++|+||+++++++......|+|||
T Consensus 5 ~~y~~~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~-~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~e 83 (291)
T cd07870 5 TSYLNLEKLGEGSYATVYKGISRINGQLVALKVISMKTEE-GVPFTAIREASLLKGLKHANIVLLHDIIHTKETLTFVFE 83 (291)
T ss_pred ceeEEEEEEEecCCEEEEEEEEcCCCcEEEEEEecccCcC-CCcHHHHHHHHHHHhcCCCCEeEEEEEEecCCeEEEEEe
Confidence 679999999999999999998754 578999998654322 222356789999999999999999999999999999999
Q ss_pred ecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCcccccccccc
Q 003963 584 FLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETYLTT 663 (783)
Q Consensus 584 ~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~~~~ 663 (783)
|+. ++|..++......+++..+..++.||+.||.|||+++ |+|+||||+|||++.++.++|+|||++..........
T Consensus 84 ~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~--i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~ 160 (291)
T cd07870 84 YMH-TDLAQYMIQHPGGLHPYNVRLFMFQLLRGLAYIHGQH--ILHRDLKPQNLLISYLGELKLADFGLARAKSIPSQTY 160 (291)
T ss_pred ccc-CCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCC--cccCCCChHHEEEcCCCcEEEeccccccccCCCCCCC
Confidence 995 6888777655556788888999999999999999998 9999999999999999999999999987544332233
Q ss_pred cCCCCCCcccCcccccCC-CCCchhHHHHHHHHHHHHHcCCCCCCCCChH-HHHHHhhc-cc------------------
Q 003963 664 KTGKGTPQWMAPEVLRNE-PSDEKSDVYSFGVILWELATEKIPWDNLNSM-QVIGAVGF-MN------------------ 722 (783)
Q Consensus 664 ~~~~Gt~~Y~aPE~~~~~-~~s~~sDIwSLG~il~elltG~~Pf~~~~~~-~~~~~i~~-~~------------------ 722 (783)
....+++.|+|||.+.+. .++.++|||||||++|+|++|..||...... +.+..+.. ..
T Consensus 161 ~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (291)
T cd07870 161 SSEVVTLWYRPPDVLLGATDYSSALDIWGAGCIFIEMLQGQPAFPGVSDVFEQLEKIWTVLGVPTEDTWPGVSKLPNYKP 240 (291)
T ss_pred CCccccccccCCceeecCCCCCcHHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHHHHHHcCCCChhhhhhhhhcccccc
Confidence 344578999999998764 4788999999999999999999999765532 11111100 00
Q ss_pred c--cccCC---------CCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHh
Q 003963 723 Q--RLEIP---------KDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYF 768 (783)
Q Consensus 723 ~--~~~~~---------~~~s~~l~~LI~~cL~~dP~~RPsa~ell~~L~~L~~~~f 768 (783)
. ....+ ...++.+.+||.+||..||.+|||+.++ +.|+||
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~~~------l~h~~~ 291 (291)
T cd07870 241 EWFLPCKPQQLRVVWKRLSRPPKAEDLASQMLMMFPKDRISAQDA------LLHPYF 291 (291)
T ss_pred hhccccCCcchhhhccccCCChHHHHHHHHHhCcCcccCcCHHHH------hcCCCC
Confidence 0 00000 0125688999999999999999999999 667776
No 301
>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-37 Score=333.41 Aligned_cols=258 Identities=21% Similarity=0.360 Sum_probs=231.8
Q ss_pred ccccceeEeeeeccCCcEEEEEEEEeCCce-EEEEEEecccCC-HHHHHHHHHHHHHHHhCCCCceeeEeceeecCCceE
Q 003963 502 ILWEDLTIGEQIGQGSCGTVYHAVWYGSQD-VAVKVFSRQEYS-DEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLC 579 (783)
Q Consensus 502 ~~~~~y~i~~~LG~G~fG~Vy~a~~~~~~~-vAiK~i~~~~~~-~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~ 579 (783)
..+.+++++..||.|+||+|-++....... +|+|++++...- ..+.+.+..|-.||..++.|+||++|..|.+..++|
T Consensus 417 v~l~dl~~iaTLGvGgFGRVELV~~~~~~~~fAlKilkK~hIVdtkQqeHv~sEr~Im~~~~s~fIvrLYrTfrd~kyvY 496 (732)
T KOG0614|consen 417 VKLSDLKRIATLGVGGFGRVELVKVNSQKATFALKILKKKHIVDTKQQEHVFSERNIMMECRSDFIVRLYRTFRDSKYVY 496 (732)
T ss_pred cchhhhhhhhhcccCccceEEEEEecccchHHHHHHHhHhhccchhHHHHHHhHHHHHHhcCchHHHHHHHHhccchhhh
Confidence 345678888999999999999998765543 899998876543 355667788999999999999999999999999999
Q ss_pred EEEEecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCcccccc
Q 003963 580 IVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHET 659 (783)
Q Consensus 580 lV~E~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~~~ 659 (783)
++||-|-||.|+.+|+.. ..++...+.+++..+++|++|||++| ||+|||||+|+|++.+|-+||.|||+|+.....
T Consensus 497 mLmEaClGGElWTiLrdR-g~Fdd~tarF~~acv~EAfeYLH~k~--iIYRDLKPENllLd~~Gy~KLVDFGFAKki~~g 573 (732)
T KOG0614|consen 497 MLMEACLGGELWTILRDR-GSFDDYTARFYVACVLEAFEYLHRKG--IIYRDLKPENLLLDNRGYLKLVDFGFAKKIGSG 573 (732)
T ss_pred hhHHhhcCchhhhhhhhc-CCcccchhhhhHHHHHHHHHHHHhcC--ceeccCChhheeeccCCceEEeehhhHHHhccC
Confidence 999999999999999764 56999999999999999999999999 999999999999999999999999999987765
Q ss_pred cccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhcccccccCCCCCCHHHHHHH
Q 003963 660 YLTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAAIV 739 (783)
Q Consensus 660 ~~~~~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~l~~LI 739 (783)
. .+.++||||.|.|||++.++.++.++|.||||+++||||+|.+||...++++.+..|......+.+|..++....+||
T Consensus 574 ~-KTwTFcGTpEYVAPEIILnKGHD~avDyWaLGIli~ELL~G~pPFs~~dpmktYn~ILkGid~i~~Pr~I~k~a~~Li 652 (732)
T KOG0614|consen 574 R-KTWTFCGTPEYVAPEIILNKGHDRAVDYWALGILIYELLTGSPPFSGVDPMKTYNLILKGIDKIEFPRRITKTATDLI 652 (732)
T ss_pred C-ceeeecCCcccccchhhhccCcchhhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHhhhhhhhcccccchhHHHHH
Confidence 4 456899999999999999999999999999999999999999999999999999988878888999999999999999
Q ss_pred HHhhhhCCCCCCC-----HHHHHHHHHHHHHHHhh
Q 003963 740 ESCWHSDPQCRPS-----FQELVDKLRDLQRQYFQ 769 (783)
Q Consensus 740 ~~cL~~dP~~RPs-----a~ell~~L~~L~~~~f~ 769 (783)
+++...+|.+|.. +.+| -+|.||.
T Consensus 653 k~LCr~~P~ERLG~~~~gI~DI------kkH~Wf~ 681 (732)
T KOG0614|consen 653 KKLCRDNPTERLGYQKGGINDI------KKHRWFE 681 (732)
T ss_pred HHHHhcCcHhhhccccCChHHH------Hhhhhhh
Confidence 9999999999975 4555 3578874
No 302
>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3. Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac
Probab=100.00 E-value=2.1e-35 Score=312.83 Aligned_cols=254 Identities=31% Similarity=0.544 Sum_probs=210.0
Q ss_pred eeEeeeeccCCcEEEEEEEEeC----CceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEeceeecCC------
Q 003963 507 LTIGEQIGQGSCGTVYHAVWYG----SQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQ------ 576 (783)
Q Consensus 507 y~i~~~LG~G~fG~Vy~a~~~~----~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~------ 576 (783)
|++.+.||+|+||.||+|.+.. ++.||||++............+.+|+.+++.++||||+++++++....
T Consensus 1 ~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~ 80 (273)
T cd05074 1 FTLGRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIFSSSDIEEFLREAACMKEFDHPNVIKLIGVSLRSRAKGRLP 80 (273)
T ss_pred CcchhcccCCCCCCEEeeEeeccCCCceEEEEEEeccccCChHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCCCCccc
Confidence 5778899999999999998642 467999999776655666678889999999999999999999886432
Q ss_pred ceEEEEEecCCCCHHHHHhhc-----CCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecC
Q 003963 577 RLCIVTEFLPRGSLFRLLQRN-----TTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFG 651 (783)
Q Consensus 577 ~~~lV~E~~~ggsL~~~L~~~-----~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFG 651 (783)
..+++++|+.+++|..++... ...++...++.++.||+.||+|||+.+ |+|+||||+||+++.++.+||+|||
T Consensus 81 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~--i~H~dikp~nili~~~~~~kl~dfg 158 (273)
T cd05074 81 IPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLSSKN--FIHRDLAARNCMLNENMTVCVADFG 158 (273)
T ss_pred ceEEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhCC--EeecccchhhEEEcCCCCEEECccc
Confidence 247899999999999887432 224788899999999999999999988 9999999999999999999999999
Q ss_pred CCccccccc--ccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCChHHHHHHhhcccccccCC
Q 003963 652 LSRLKHETY--LTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELAT-EKIPWDNLNSMQVIGAVGFMNQRLEIP 728 (783)
Q Consensus 652 la~~~~~~~--~~~~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~~~~ 728 (783)
+++...... .......+++.|++||.+.+..++.++|||||||++|+|++ |.+||...+.......+.. ......+
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~sDi~slG~il~el~~~g~~p~~~~~~~~~~~~~~~-~~~~~~~ 237 (273)
T cd05074 159 LSKKIYSGDYYRQGCASKLPVKWLALESLADNVYTTHSDVWAFGVTMWEIMTRGQTPYAGVENSEIYNYLIK-GNRLKQP 237 (273)
T ss_pred ccccccCCcceecCCCccCchhhcCHhHHhcCccchhhhhHHHHHHHHHHhhCCCCCCCCCCHHHHHHHHHc-CCcCCCC
Confidence 987653321 11223345678999999998889999999999999999999 8999988777665554432 2234455
Q ss_pred CCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHH
Q 003963 729 KDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDL 763 (783)
Q Consensus 729 ~~~s~~l~~LI~~cL~~dP~~RPsa~ell~~L~~L 763 (783)
..++..+.+++.+||..+|.+||++.+++..|+++
T Consensus 238 ~~~~~~~~~l~~~~l~~~p~~Rps~~~~~~~l~~~ 272 (273)
T cd05074 238 PDCLEDVYELMCQCWSPEPKCRPSFQHLRDQLELI 272 (273)
T ss_pred CCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 67889999999999999999999999999998865
No 303
>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent
Probab=100.00 E-value=1.2e-35 Score=315.73 Aligned_cols=256 Identities=27% Similarity=0.497 Sum_probs=213.5
Q ss_pred ceeEeeeeccCCcEEEEEEEEe-CCceEEEEEEecccCCHHHHHHHHHHHHHHHhCC---CCceeeEeceeecCCceEEE
Q 003963 506 DLTIGEQIGQGSCGTVYHAVWY-GSQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLR---HPNVLLFMGAVTSPQRLCIV 581 (783)
Q Consensus 506 ~y~i~~~LG~G~fG~Vy~a~~~-~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~---HpnIv~l~~~~~~~~~~~lV 581 (783)
.|++.+.||.|+||.||+|.+. .++.|++|++.... .......+.+|+.+++.++ ||||+++++++......|+|
T Consensus 2 ~y~~~~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~-~~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~~~~~~~lv 80 (277)
T cd06917 2 LYQRLELIGRGAYGAVYRGKHVPTGRVVALKIINLDT-PDDDVSDIQREVALLSQLRQSQPPNITKYYGSYLKGPRLWII 80 (277)
T ss_pred hhhhhhheeccCCceEEEEEEcCCCcEEEEEEecCCC-CchhHHHHHHHHHHHHHhccCCCCCeeeEeeeeeeCCEEEEE
Confidence 4778899999999999999975 45779999986543 2334567888999999996 99999999999999999999
Q ss_pred EEecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCcccccccc
Q 003963 582 TEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETYL 661 (783)
Q Consensus 582 ~E~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~~ 661 (783)
|||+++++|.+++... .+++..++.++.|++.||.|||+.+ |+|+||+|+||+++.++.++|+|||++........
T Consensus 81 ~e~~~~~~L~~~~~~~--~l~~~~~~~i~~~i~~~l~~lh~~~--i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~ 156 (277)
T cd06917 81 MEYAEGGSVRTLMKAG--PIAEKYISVIIREVLVALKYIHKVG--VIHRDIKAANILVTNTGNVKLCDFGVAALLNQNSS 156 (277)
T ss_pred EecCCCCcHHHHHHcc--CCCHHHHHHHHHHHHHHHHHHHhCC--cccCCcCHHHEEEcCCCCEEEccCCceeecCCCcc
Confidence 9999999999998653 6889999999999999999999998 99999999999999999999999999876654433
Q ss_pred cccCCCCCCcccCcccccC-CCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhcccccccCCC-CCCHHHHHHH
Q 003963 662 TTKTGKGTPQWMAPEVLRN-EPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLEIPK-DVDPRWAAIV 739 (783)
Q Consensus 662 ~~~~~~Gt~~Y~aPE~~~~-~~~s~~sDIwSLG~il~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~-~~s~~l~~LI 739 (783)
......|+..|+|||.+.+ ..++.++|+|||||++|+|++|..||...........+... ....++. .++.++.+||
T Consensus 157 ~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~i 235 (277)
T cd06917 157 KRSTFVGTPYWMAPEVITEGKYYDTKADIWSLGITIYEMATGNPPYSDVDAFRAMMLIPKS-KPPRLEDNGYSKLLREFV 235 (277)
T ss_pred ccccccCCcceeCHHHhccCCccccchhHHHHHHHHHHHHhCCCCCCCCChhhhhhccccC-CCCCCCcccCCHHHHHHH
Confidence 3344568999999998865 45689999999999999999999999877665544333221 1223333 3788999999
Q ss_pred HHhhhhCCCCCCCHHHHHHHHHHHHHHHhhcCcC
Q 003963 740 ESCWHSDPQCRPSFQELVDKLRDLQRQYFQASRS 773 (783)
Q Consensus 740 ~~cL~~dP~~RPsa~ell~~L~~L~~~~f~~~~~ 773 (783)
.+||..||.+||++.++ +.++||+....
T Consensus 236 ~~~l~~~p~~R~~~~~i------l~~~~~~~~~~ 263 (277)
T cd06917 236 AACLDEEPKERLSAEEL------LKSKWIKAHSK 263 (277)
T ss_pred HHHcCCCcccCcCHHHH------hhChHhhcccc
Confidence 99999999999999999 56899977653
No 304
>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i
Probab=100.00 E-value=7.4e-36 Score=321.85 Aligned_cols=252 Identities=27% Similarity=0.424 Sum_probs=210.6
Q ss_pred ceeEeeeeccCCcEEEEEEEEe-CCceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEeceeecCCceEEEEEe
Q 003963 506 DLTIGEQIGQGSCGTVYHAVWY-GSQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIVTEF 584 (783)
Q Consensus 506 ~y~i~~~LG~G~fG~Vy~a~~~-~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lV~E~ 584 (783)
.|.....||.|+||.||++.+. .++.||+|++...... ....+.+|+.+++.++||||+++++++...+..|++|||
T Consensus 22 ~~~~~~~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~--~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~iv~e~ 99 (297)
T cd06659 22 LLENYIKIGEGSTGIVCIAREKHSGRQVAVKMMDLRKQQ--RRELLFNEVVIMRDYQHQNVVEMYKSYLVGEELWVLMEF 99 (297)
T ss_pred hHHhhhhcCCCCceeEEEEEEcCCCCEEEEEEEEecccc--hHHHHHHHHHHHHhCCCCchhhhhhheeeCCeEEEEEec
Confidence 3445568999999999999875 4578999998654322 235678899999999999999999999999999999999
Q ss_pred cCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCccccccccccc
Q 003963 585 LPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETYLTTK 664 (783)
Q Consensus 585 ~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~~~~~ 664 (783)
+++++|..++.. ..+++..++.++.|++.||.|||+.+ |+|+||||+||+++.++.++|+|||++...........
T Consensus 100 ~~~~~L~~~~~~--~~~~~~~~~~~~~qi~~~L~~LH~~~--ivH~dl~p~Nill~~~~~~kL~dfg~~~~~~~~~~~~~ 175 (297)
T cd06659 100 LQGGALTDIVSQ--TRLNEEQIATVCESVLQALCYLHSQG--VIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPKRK 175 (297)
T ss_pred CCCCCHHHHHhh--cCCCHHHHHHHHHHHHHHHHHHHhCC--eecCCCCHHHeEEccCCcEEEeechhHhhccccccccc
Confidence 999999998864 34889999999999999999999998 99999999999999999999999999875544333333
Q ss_pred CCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccc-ccccCCCCCCHHHHHHHHHhh
Q 003963 665 TGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMN-QRLEIPKDVDPRWAAIVESCW 743 (783)
Q Consensus 665 ~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~elltG~~Pf~~~~~~~~~~~i~~~~-~~~~~~~~~s~~l~~LI~~cL 743 (783)
...|+..|+|||++.+..++.++|||||||++|+|++|+.||...........+.... .....+..++..+.++|.+||
T Consensus 176 ~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~l 255 (297)
T cd06659 176 SLVGTPYWMAPEVISRTPYGTEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMKRLRDSPPPKLKNAHKISPVLRDFLERML 255 (297)
T ss_pred ceecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhccCCCCccccCCCCHHHHHHHHHHh
Confidence 4568999999999999889999999999999999999999998776665554442211 122334567889999999999
Q ss_pred hhCCCCCCCHHHHHHHHHHHHHHHhh
Q 003963 744 HSDPQCRPSFQELVDKLRDLQRQYFQ 769 (783)
Q Consensus 744 ~~dP~~RPsa~ell~~L~~L~~~~f~ 769 (783)
+.+|.+||++.++ ++++||.
T Consensus 256 ~~~P~~Rps~~~l------l~~~~~~ 275 (297)
T cd06659 256 TREPQERATAQEL------LDHPFLL 275 (297)
T ss_pred cCCcccCcCHHHH------hhChhhc
Confidence 9999999999999 5667774
No 305
>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells
Probab=100.00 E-value=2.8e-35 Score=311.90 Aligned_cols=246 Identities=30% Similarity=0.438 Sum_probs=195.4
Q ss_pred eeeccCCcEEEEEEEEeCC---ceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEeceeecCCceEEEEEecCC
Q 003963 511 EQIGQGSCGTVYHAVWYGS---QDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIVTEFLPR 587 (783)
Q Consensus 511 ~~LG~G~fG~Vy~a~~~~~---~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lV~E~~~g 587 (783)
+.||+|+||.||+|....+ ..+++|.+..... ......+.+|+.+++.++||||+++++++.....+++||||+++
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~ 79 (269)
T cd05087 1 KEIGNGWFGKVILGEVNSGYTPAQVVVKELRVSAS-VQEQMKFLEEAQPYRSLQHSNLLQCLGQCTEVTPYLLVMEFCPL 79 (269)
T ss_pred CcccccCCceEEEEEEcCCCCceEEEEEecCCCCC-hHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCCcEEEEECCCC
Confidence 3689999999999986432 4689998765543 23335688899999999999999999999998999999999999
Q ss_pred CCHHHHHhhcC----CcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCccccccc--c
Q 003963 588 GSLFRLLQRNT----TKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETY--L 661 (783)
Q Consensus 588 gsL~~~L~~~~----~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~--~ 661 (783)
++|.+++.... ...++..+..++.|++.||+|||+.+ ++|+||||+||+++.++.++|+|||++....... .
T Consensus 80 g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~--i~H~dlkp~nil~~~~~~~kL~dfg~~~~~~~~~~~~ 157 (269)
T cd05087 80 GDLKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLHKNN--FIHSDLALRNCLLTADLTVKIGDYGLSHNKYKEDYYV 157 (269)
T ss_pred CcHHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCC--EeccccCcceEEEcCCCcEEECCccccccccCcceee
Confidence 99999996532 23566778889999999999999998 9999999999999999999999999986543321 1
Q ss_pred cccCCCCCCcccCcccccCC-------CCCchhHHHHHHHHHHHHHc-CCCCCCCCChHHHHHHhhcc-cc---cccCCC
Q 003963 662 TTKTGKGTPQWMAPEVLRNE-------PSDEKSDVYSFGVILWELAT-EKIPWDNLNSMQVIGAVGFM-NQ---RLEIPK 729 (783)
Q Consensus 662 ~~~~~~Gt~~Y~aPE~~~~~-------~~s~~sDIwSLG~il~ellt-G~~Pf~~~~~~~~~~~i~~~-~~---~~~~~~ 729 (783)
......++..|+|||++.+. .++.++|||||||++|+|++ |..||......+........ .. ...+..
T Consensus 158 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (269)
T cd05087 158 TPDQLWVPLRWIAPELVDEVHGNLLVVDQTKESNVWSLGVTIWELFELGSQPYRHLSDEQVLTYTVREQQLKLPKPRLKL 237 (269)
T ss_pred cCCCcCCcccccCHhHhccccccccccCCCccchhHHHHHHHHHHHhCCCCCCCCCChHHHHHHHhhcccCCCCCCccCC
Confidence 22234578889999998643 34789999999999999996 99999877665543322111 11 122233
Q ss_pred CCCHHHHHHHHHhhhhCCCCCCCHHHHHHHH
Q 003963 730 DVDPRWAAIVESCWHSDPQCRPSFQELVDKL 760 (783)
Q Consensus 730 ~~s~~l~~LI~~cL~~dP~~RPsa~ell~~L 760 (783)
..++.+.+++..|| .+|++|||+.+|+..|
T Consensus 238 ~~~~~~~~l~~~c~-~~P~~Rpt~~~l~~~l 267 (269)
T cd05087 238 PLSDRWYEVMQFCW-LQPEQRPSAEEVHLLL 267 (269)
T ss_pred CCChHHHHHHHHHh-cCcccCCCHHHHHHHh
Confidence 56788999999999 6899999999998765
No 306
>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc
Probab=100.00 E-value=9e-36 Score=317.57 Aligned_cols=253 Identities=27% Similarity=0.368 Sum_probs=205.9
Q ss_pred eeEeeeeccCCcEEEEEEEEe-CCceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEeceeecCCceEEEEEec
Q 003963 507 LTIGEQIGQGSCGTVYHAVWY-GSQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIVTEFL 585 (783)
Q Consensus 507 y~i~~~LG~G~fG~Vy~a~~~-~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lV~E~~ 585 (783)
|++.++||.|++|.||+|.+. .+..||+|++............+.+|+.+++.++||||+++++++...+..|++|||+
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~~~~iv~~~~~~~~~~~~~iv~e~~ 80 (283)
T cd07835 1 YQKVEKIGEGTYGVVYKARDKLTGEIVALKKIRLETEDEGVPSTAIREISLLKELNHPNIVRLLDVVHSENKLYLVFEFL 80 (283)
T ss_pred CchheEecCCCCeEEEEEEEcCCCCEEEEEEeecccccccchhHHHHHHHHHHhcCCCCccCHhheeccCCeEEEEEecc
Confidence 677899999999999999875 4678999998765544444456788999999999999999999999999999999999
Q ss_pred CCCCHHHHHhhcC-CcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCccccccccccc
Q 003963 586 PRGSLFRLLQRNT-TKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETYLTTK 664 (783)
Q Consensus 586 ~ggsL~~~L~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~~~~~ 664 (783)
+ ++|.+++.... ..+++..++.++.|++.||.|||+++ ++|+||+|+||+++.++.++|+|||++...........
T Consensus 81 ~-~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~lH~~~--~~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~ 157 (283)
T cd07835 81 D-LDLKKYMDSSPLTGLDPPLIKSYLYQLLQGIAYCHSHR--VLHRDLKPQNLLIDREGALKLADFGLARAFGVPVRTYT 157 (283)
T ss_pred C-cCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC--eeCCCCCHHHEEEcCCCcEEEeecccccccCCCccccC
Confidence 5 68999987644 45899999999999999999999988 99999999999999999999999999875543322223
Q ss_pred CCCCCCcccCcccccCC-CCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhcc----------------------
Q 003963 665 TGKGTPQWMAPEVLRNE-PSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFM---------------------- 721 (783)
Q Consensus 665 ~~~Gt~~Y~aPE~~~~~-~~s~~sDIwSLG~il~elltG~~Pf~~~~~~~~~~~i~~~---------------------- 721 (783)
...+++.|+|||++.+. .++.++|||||||++|+|++|.+||...+.......+...
T Consensus 158 ~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (283)
T cd07835 158 HEVVTLWYRAPEILLGSRQYSTPVDIWSIGCIFAEMVNRRPLFPGDSEIDQLFRIFRTLGTPDEDVWPGVTSLPDYKPTF 237 (283)
T ss_pred ccccccCCCCCceeecCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhhhhhchhhhhhc
Confidence 34568899999988764 4689999999999999999999999876654332221100
Q ss_pred -----cccccCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHh
Q 003963 722 -----NQRLEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYF 768 (783)
Q Consensus 722 -----~~~~~~~~~~s~~l~~LI~~cL~~dP~~RPsa~ell~~L~~L~~~~f 768 (783)
.........++..+.++|.+||+.+|.+||++.++ +.++||
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~i------l~~~~~ 283 (283)
T cd07835 238 PKWARQDLSKVVPNLDEDGLDLLSKMLVYDPAKRISAKAA------LQHPYF 283 (283)
T ss_pred ccccccchhhhcCCCCHHHHHHHHHHhcCChhhCcCHHHH------hcCCCC
Confidence 00011234577899999999999999999999999 456665
No 307
>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity
Probab=100.00 E-value=4e-36 Score=316.50 Aligned_cols=239 Identities=23% Similarity=0.436 Sum_probs=197.9
Q ss_pred eeeccCCcEEEEEEEEeC--------CceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEeceeecCCceEEEE
Q 003963 511 EQIGQGSCGTVYHAVWYG--------SQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIVT 582 (783)
Q Consensus 511 ~~LG~G~fG~Vy~a~~~~--------~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lV~ 582 (783)
+.||.|+||.||+|.+.. ..+|++|.+.... ......+.+|+.+++.+.||||+++++++..+...++||
T Consensus 1 ~~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~~--~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~ 78 (258)
T cd05078 1 ESLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSH--RNYSESFFEAASMMSQLSHKHLVLNYGVCVCGDESIMVQ 78 (258)
T ss_pred CCCCcccchhheeeeecccccccccccchhhHHhhcchh--HHHHHHHHHHHHHHHhCCCCChhheeeEEEeCCCcEEEE
Confidence 368999999999998643 1247888775432 234467888999999999999999999999989999999
Q ss_pred EecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCc--------EEEEecCCCc
Q 003963 583 EFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWT--------VKVGDFGLSR 654 (783)
Q Consensus 583 E~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~--------vkL~DFGla~ 654 (783)
||+++|+|.+++......+++..++.++.||+.||+|||+++ |+||||||+|||++.++. ++|+|||++.
T Consensus 79 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~--iiH~dlkp~nili~~~~~~~~~~~~~~~l~d~g~~~ 156 (258)
T cd05078 79 EYVKFGSLDTYLKKNKNLINISWKLEVAKQLAWALHFLEDKG--LTHGNVCAKNVLLIREEDRKTGNPPFIKLSDPGISI 156 (258)
T ss_pred ecCCCCcHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCC--eecCCCccceEEEecccccccCCCceEEeccccccc
Confidence 999999999999876667899999999999999999999998 999999999999987654 6999999886
Q ss_pred ccccccccccCCCCCCcccCcccccCC-CCCchhHHHHHHHHHHHHHcC-CCCCCCCChHHHHHHhhcccccccCCCCCC
Q 003963 655 LKHETYLTTKTGKGTPQWMAPEVLRNE-PSDEKSDVYSFGVILWELATE-KIPWDNLNSMQVIGAVGFMNQRLEIPKDVD 732 (783)
Q Consensus 655 ~~~~~~~~~~~~~Gt~~Y~aPE~~~~~-~~s~~sDIwSLG~il~elltG-~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s 732 (783)
.... .....++..|+|||++.+. .++.++|||||||++|+|++| .+||........... ......+|...+
T Consensus 157 ~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~~~~~~~~~~~~~~~---~~~~~~~~~~~~ 229 (258)
T cd05078 157 TVLP----KEILLERIPWVPPECIENPQNLSLAADKWSFGTTLWEIFSGGDKPLSALDSQKKLQF---YEDRHQLPAPKW 229 (258)
T ss_pred ccCC----chhccccCCccCchhccCCCCCCchhhHHHHHHHHHHHHcCCCCChhhccHHHHHHH---HHccccCCCCCc
Confidence 4432 2234678899999999874 578999999999999999998 577766655443322 223455666778
Q ss_pred HHHHHHHHHhhhhCCCCCCCHHHHHHHH
Q 003963 733 PRWAAIVESCWHSDPQCRPSFQELVDKL 760 (783)
Q Consensus 733 ~~l~~LI~~cL~~dP~~RPsa~ell~~L 760 (783)
.++.+||.+||+.+|.+|||+.++++.|
T Consensus 230 ~~~~~li~~~l~~~p~~Rps~~~il~~l 257 (258)
T cd05078 230 TELANLINQCMDYEPDFRPSFRAIIRDL 257 (258)
T ss_pred HHHHHHHHHHhccChhhCCCHHHHHHhc
Confidence 9999999999999999999999998875
No 308
>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases. Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core
Probab=100.00 E-value=2.4e-35 Score=306.40 Aligned_cols=247 Identities=33% Similarity=0.559 Sum_probs=211.0
Q ss_pred ceeEeeeeccCCcEEEEEEEEe-CCceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEeceeecCCceEEEEEe
Q 003963 506 DLTIGEQIGQGSCGTVYHAVWY-GSQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIVTEF 584 (783)
Q Consensus 506 ~y~i~~~LG~G~fG~Vy~a~~~-~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lV~E~ 584 (783)
+|.+.+.||.|++|.||++.+. .++.+++|++..... .....+.+|+.+++.++|+||+++++++......++++||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~--~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l~~e~ 78 (253)
T cd05122 1 LFEILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESK--EKKEKIINEIQILKKCKHPNIVKYYGSYLKKDELWIVMEF 78 (253)
T ss_pred CceeeeeeccCCceEEEEEEECCCCcEEEEEEecccch--hHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEec
Confidence 5888999999999999999986 456799999876543 3456888999999999999999999999999999999999
Q ss_pred cCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCccccccccccc
Q 003963 585 LPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETYLTTK 664 (783)
Q Consensus 585 ~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~~~~~ 664 (783)
+++++|.+++......+++..+..++.|++.+|.|||..+ ++|+||+|+||+++.++.++|+|||.+........ ..
T Consensus 79 ~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~--i~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~-~~ 155 (253)
T cd05122 79 CSGGSLKDLLKSTNQTLTESQIAYVCKELLKGLEYLHSNG--IIHRDIKAANILLTSDGEVKLIDFGLSAQLSDTKA-RN 155 (253)
T ss_pred CCCCcHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhcCC--EecCCCCHHHEEEccCCeEEEeecccccccccccc-cc
Confidence 9999999999876567899999999999999999999988 99999999999999999999999999876654332 33
Q ss_pred CCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhcccccccC--CCCCCHHHHHHHHHh
Q 003963 665 TGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLEI--PKDVDPRWAAIVESC 742 (783)
Q Consensus 665 ~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~--~~~~s~~l~~LI~~c 742 (783)
...++..|++||.+.+...+.++|+||||+++|+|++|..||...+.......... ...... +..++..+.++|.+|
T Consensus 156 ~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~~~ 234 (253)
T cd05122 156 TMVGTPYWMAPEVINGKPYDYKADIWSLGITAIELAEGKPPYSELPPMKALFKIAT-NGPPGLRNPEKWSDEFKDFLKKC 234 (253)
T ss_pred ceecCCcccCHHHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHh-cCCCCcCcccccCHHHHHHHHHH
Confidence 45688999999999988899999999999999999999999988765554444332 222222 233489999999999
Q ss_pred hhhCCCCCCCHHHHHH
Q 003963 743 WHSDPQCRPSFQELVD 758 (783)
Q Consensus 743 L~~dP~~RPsa~ell~ 758 (783)
|..||.+|||+.++++
T Consensus 235 l~~~p~~R~t~~~~l~ 250 (253)
T cd05122 235 LQKNPEKRPTAEQLLK 250 (253)
T ss_pred ccCChhhCCCHHHHhc
Confidence 9999999999999954
No 309
>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki
Probab=100.00 E-value=1.2e-35 Score=311.59 Aligned_cols=237 Identities=25% Similarity=0.441 Sum_probs=195.4
Q ss_pred eeeccCCcEEEEEEEEeCCc-----------eEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEeceeecCCceE
Q 003963 511 EQIGQGSCGTVYHAVWYGSQ-----------DVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLC 579 (783)
Q Consensus 511 ~~LG~G~fG~Vy~a~~~~~~-----------~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~ 579 (783)
++||+|+||.||++.+.... .+++|++...... ...+.+|+.+++.++||||+++++++.. ...+
T Consensus 1 ~~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~---~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~ 76 (259)
T cd05037 1 EHLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHRD---SLAFFETASLMSQLSHKHLVKLYGVCVR-DENI 76 (259)
T ss_pred CcccccccceEEEEEEeccCCccccCCccceeeeeeccccchhh---HHHHHHHHHHHHcCCCcchhheeeEEec-CCcE
Confidence 46899999999999986543 4777776543321 5678899999999999999999999887 7789
Q ss_pred EEEEecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCC-------cEEEEecCC
Q 003963 580 IVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHW-------TVKVGDFGL 652 (783)
Q Consensus 580 lV~E~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~-------~vkL~DFGl 652 (783)
+||||+++++|.+++......+++..++.++.||+.||.|||+++ |+|+||||+|||++.++ .+||+|||+
T Consensus 77 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~--i~H~dlkp~Nill~~~~~~~~~~~~~kl~Dfg~ 154 (259)
T cd05037 77 MVEEYVKFGPLDVFLHREKNNVSLHWKLDVAKQLASALHYLEDKK--LVHGNVCGKNILVARYGLNEGYVPFIKLSDPGI 154 (259)
T ss_pred EEEEcCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhhCC--eecccCccceEEEecCccccCCceeEEeCCCCc
Confidence 999999999999999876657899999999999999999999988 99999999999999887 799999999
Q ss_pred CcccccccccccCCCCCCcccCcccccCC--CCCchhHHHHHHHHHHHHHc-CCCCCCCCChHHHHHHhhcccccccCCC
Q 003963 653 SRLKHETYLTTKTGKGTPQWMAPEVLRNE--PSDEKSDVYSFGVILWELAT-EKIPWDNLNSMQVIGAVGFMNQRLEIPK 729 (783)
Q Consensus 653 a~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~--~~s~~sDIwSLG~il~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~~~~~ 729 (783)
+..... .....++..|+|||.+.+. .++.++|||||||++|+|++ |..||............. .....+.
T Consensus 155 a~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~~~~~l~~~~~~p~~~~~~~~~~~~~~---~~~~~~~ 227 (259)
T cd05037 155 PITVLS----REERVERIPWIAPECIRNGQASLTIAADKWSFGTTLLEICSNGEEPLSTLSSSEKERFYQ---DQHRLPM 227 (259)
T ss_pred cccccc----ccccccCCCccChhhhcCCCCCcchhhHHHHHHHHHHHHHhCCCCCcccCCchhHHHHHh---cCCCCCC
Confidence 876443 2234567889999999877 78999999999999999999 688887765433322221 1222233
Q ss_pred CCCHHHHHHHHHhhhhCCCCCCCHHHHHHHH
Q 003963 730 DVDPRWAAIVESCWHSDPQCRPSFQELVDKL 760 (783)
Q Consensus 730 ~~s~~l~~LI~~cL~~dP~~RPsa~ell~~L 760 (783)
.....+.++|.+||..+|.+||++.++++.|
T Consensus 228 ~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l 258 (259)
T cd05037 228 PDCAELANLINQCWTYDPTKRPSFRAILRDL 258 (259)
T ss_pred CCchHHHHHHHHHhccChhhCCCHHHHHHhc
Confidence 3348999999999999999999999998876
No 310
>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.2e-36 Score=327.36 Aligned_cols=261 Identities=34% Similarity=0.597 Sum_probs=229.5
Q ss_pred ccccccccceeEeeeeccCCcEEEEEEEEeC-CceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEeceeecCC
Q 003963 498 LDYEILWEDLTIGEQIGQGSCGTVYHAVWYG-SQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQ 576 (783)
Q Consensus 498 ~~~e~~~~~y~i~~~LG~G~fG~Vy~a~~~~-~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~ 576 (783)
..||+...+..+..+||-|.||.||.|+|+. .-.||||.++.+.. .+++|..|+.+|+.++|||+|+++++|..+-
T Consensus 260 DkWEmeRtdItMkhKLGGGQYGeVYeGvWKkyslTvAVKtLKEDtM---eveEFLkEAAvMKeikHpNLVqLLGVCT~Ep 336 (1157)
T KOG4278|consen 260 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM---EVEEFLKEAAVMKEIKHPNLVQLLGVCTHEP 336 (1157)
T ss_pred chhhccchheeeeeccCCCcccceeeeeeeccceeeehhhhhhcch---hHHHHHHHHHHHHhhcCccHHHHhhhhccCC
Confidence 4677777889999999999999999999875 45699999876543 3578999999999999999999999999999
Q ss_pred ceEEEEEecCCCCHHHHHhhcCC-cchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCcc
Q 003963 577 RLCIVTEFLPRGSLFRLLQRNTT-KLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRL 655 (783)
Q Consensus 577 ~~~lV~E~~~ggsL~~~L~~~~~-~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~ 655 (783)
.+|||.|||..|+|.+||+.+.. .++.-..+.++.||..||.||..++ +|||||...|+||.++..||++|||++++
T Consensus 337 PFYIiTEfM~yGNLLdYLRecnr~ev~avvLlyMAtQIsSaMeYLEkkn--FIHRDLAARNCLVgEnhiVKvADFGLsRl 414 (1157)
T KOG4278|consen 337 PFYIITEFMCYGNLLDYLRECNRSEVPAVVLLYMATQISSAMEYLEKKN--FIHRDLAARNCLVGENHIVKVADFGLSRL 414 (1157)
T ss_pred CeEEEEecccCccHHHHHHHhchhhcchhHHHHHHHHHHHHHHHHHHhh--hhhhhhhhhhccccccceEEeeccchhhh
Confidence 99999999999999999987543 3566677788999999999999988 99999999999999999999999999998
Q ss_pred ccccccccc-CCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCChHHHHHHhhcccccccCCCCCCH
Q 003963 656 KHETYLTTK-TGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELAT-EKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDP 733 (783)
Q Consensus 656 ~~~~~~~~~-~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~ 733 (783)
+.....+.. ...-...|.|||.+....++.|+|||+||++|||+.| |..||.+.+..+++..+. ...++.-|..|++
T Consensus 415 MtgDTYTAHAGAKFPIKWTAPEsLAyNtFSiKSDVWAFGVLLWEIATYGMsPYPGidlSqVY~LLE-kgyRM~~PeGCPp 493 (1157)
T KOG4278|consen 415 MTGDTYTAHAGAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYGLLE-KGYRMDGPEGCPP 493 (1157)
T ss_pred hcCCceecccCccCcccccCcccccccccccchhhHHHHHHHHHHHhcCCCCCCCccHHHHHHHHh-ccccccCCCCCCH
Confidence 765433222 2234678999999999999999999999999999998 999999999998887764 5678899999999
Q ss_pred HHHHHHHHhhhhCCCCCCCHHHHHHHHHHHH
Q 003963 734 RWAAIVESCWHSDPQCRPSFQELVDKLRDLQ 764 (783)
Q Consensus 734 ~l~~LI~~cL~~dP~~RPsa~ell~~L~~L~ 764 (783)
...+|++.||++.|..||++.++-+.|+.+.
T Consensus 494 kVYeLMraCW~WsPsDRPsFaeiHqafEtmf 524 (1157)
T KOG4278|consen 494 KVYELMRACWNWSPSDRPSFAEIHQAFETMF 524 (1157)
T ss_pred HHHHHHHHHhcCCcccCccHHHHHHHHHHHh
Confidence 9999999999999999999999999988663
No 311
>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl
Probab=100.00 E-value=1.3e-35 Score=320.20 Aligned_cols=258 Identities=23% Similarity=0.304 Sum_probs=204.9
Q ss_pred ccccceeEeeeeccCCcEEEEEEEEeC-CceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEeceeecCC----
Q 003963 502 ILWEDLTIGEQIGQGSCGTVYHAVWYG-SQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQ---- 576 (783)
Q Consensus 502 ~~~~~y~i~~~LG~G~fG~Vy~a~~~~-~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~---- 576 (783)
...++|++.++||+|+||.||+|.+.. ++.||||++............+.+|+.+++.++||||+++++++....
T Consensus 9 ~~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~ 88 (310)
T cd07865 9 DEVSKYEKLAKIGQGTFGEVFKARHKKTKQIVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPYN 88 (310)
T ss_pred chhhheEEEEEeecCCCEEEEEEEECCCCcEEEEEEEeccCCcCCchhHHHHHHHHHHhCCCCCccceEEEEeccccccc
Confidence 345789999999999999999999864 568999998765433333345668999999999999999999886544
Q ss_pred ----ceEEEEEecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCC
Q 003963 577 ----RLCIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGL 652 (783)
Q Consensus 577 ----~~~lV~E~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGl 652 (783)
..++||||+. ++|.+++......+++..++.++.||+.||+|||+++ ++|+||||+||+++.++.+||+|||+
T Consensus 89 ~~~~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~--i~H~dl~p~nil~~~~~~~kl~dfg~ 165 (310)
T cd07865 89 RYKGSFYLVFEFCE-HDLAGLLSNKNVKFTLSEIKKVMKMLLNGLYYIHRNK--ILHRDMKAANILITKDGILKLADFGL 165 (310)
T ss_pred CCCceEEEEEcCCC-cCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCC--eeccCCCHHHEEECCCCcEEECcCCC
Confidence 3599999995 5898888766557899999999999999999999998 99999999999999999999999999
Q ss_pred Cccccccccc----ccCCCCCCcccCcccccCCC-CCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccccc---
Q 003963 653 SRLKHETYLT----TKTGKGTPQWMAPEVLRNEP-SDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQR--- 724 (783)
Q Consensus 653 a~~~~~~~~~----~~~~~Gt~~Y~aPE~~~~~~-~s~~sDIwSLG~il~elltG~~Pf~~~~~~~~~~~i~~~~~~--- 724 (783)
+......... .....++..|+|||.+.+.. ++.++||||||+++|+|++|..||...+.......+......
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~el~t~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (310)
T cd07865 166 ARAFSLSKNSKPNRYTNRVVTLWYRPPELLLGERDYGPPIDMWGAGCIMAEMWTRSPIMQGNTEQHQLTLISQLCGSITP 245 (310)
T ss_pred cccccCCcccCCCCccCcccCccccCcHHhcCCcccCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCh
Confidence 8765432211 12345788999999887654 688999999999999999999999877655443332221110
Q ss_pred --------------ccCC-------------CCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHh
Q 003963 725 --------------LEIP-------------KDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYF 768 (783)
Q Consensus 725 --------------~~~~-------------~~~s~~l~~LI~~cL~~dP~~RPsa~ell~~L~~L~~~~f 768 (783)
..++ ...++.+.+||.+||..||.+||++.++ ++|+||
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~dli~~~l~~~P~~R~t~~e~------l~h~~f 310 (310)
T cd07865 246 EVWPGVDKLELFKKMELPQGQKRKVKERLKPYVKDPHALDLIDKLLVLDPAKRIDADTA------LNHDFF 310 (310)
T ss_pred hhcccccchhhhhhccCCCccchhhHHhcccccCCHHHHHHHHHHhcCChhhccCHHHH------hcCCCC
Confidence 0011 1235678899999999999999999999 567776
No 312
>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun
Probab=100.00 E-value=1.9e-35 Score=316.45 Aligned_cols=255 Identities=27% Similarity=0.441 Sum_probs=213.5
Q ss_pred ceeEeeeeccCCcEEEEEEEEe-CCceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEeceeecCCceEEEEEe
Q 003963 506 DLTIGEQIGQGSCGTVYHAVWY-GSQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIVTEF 584 (783)
Q Consensus 506 ~y~i~~~LG~G~fG~Vy~a~~~-~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lV~E~ 584 (783)
+|...++||+|++|.||++.+. .++.+++|++.... ......+.+|+.+++.++||||+++++++...+..++++||
T Consensus 20 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~--~~~~~~~~~e~~~l~~~~h~~vv~~~~~~~~~~~~~~v~e~ 97 (285)
T cd06648 20 YLDNFVKIGEGSTGIVCIATDKSTGRQVAVKKMDLRK--QQRRELLFNEVVIMRDYQHPNIVEMYSSYLVGDELWVVMEF 97 (285)
T ss_pred hhhcceEeccCCCeEEEEEEECCCCCEEEEEEEeccc--hhHHHHHHHHHHHHHHcCCCChheEEEEEEcCCeEEEEEec
Confidence 4555679999999999999875 45679999886433 23345678899999999999999999999999999999999
Q ss_pred cCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCccccccccccc
Q 003963 585 LPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETYLTTK 664 (783)
Q Consensus 585 ~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~~~~~ 664 (783)
+++++|.+++.. .+++...+..++.|++.||+|||+++ |+||||+|+||+++.++.++|+|||++...........
T Consensus 98 ~~~~~L~~~~~~--~~~~~~~~~~~~~ql~~~l~~lH~~~--i~H~dl~p~Nil~~~~~~~~l~d~g~~~~~~~~~~~~~ 173 (285)
T cd06648 98 LEGGALTDIVTH--TRMNEEQIATVCLAVLKALSFLHAQG--VIHRDIKSDSILLTSDGRVKLSDFGFCAQVSKEVPRRK 173 (285)
T ss_pred cCCCCHHHHHHh--CCCCHHHHHHHHHHHHHHHHHHHhCC--eecCCCChhhEEEcCCCcEEEcccccchhhccCCcccc
Confidence 999999999976 45889999999999999999999998 99999999999999999999999998865544333333
Q ss_pred CCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhcccc-cccCCCCCCHHHHHHHHHhh
Q 003963 665 TGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQ-RLEIPKDVDPRWAAIVESCW 743 (783)
Q Consensus 665 ~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~elltG~~Pf~~~~~~~~~~~i~~~~~-~~~~~~~~s~~l~~LI~~cL 743 (783)
...|++.|+|||.+.+..++.++|||||||++|+|++|..||...+.......+..... ....+..++..+.+||.+||
T Consensus 174 ~~~~~~~y~aPE~~~~~~~~~~~Dv~slGv~l~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l 253 (285)
T cd06648 174 SLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMVDGEPPYFNEPPLQAMKRIRDNLPPKLKNLHKVSPRLRSFLDRML 253 (285)
T ss_pred cccCCccccCHHHhcCCCCCCcccHHHHHHHHHHHHhCCCCCcCCCHHHHHHHHHhcCCCCCcccccCCHHHHHHHHHHc
Confidence 45689999999999988899999999999999999999999987776655544432211 12223347899999999999
Q ss_pred hhCCCCCCCHHHHHHHHHHHHHHHhhcCc
Q 003963 744 HSDPQCRPSFQELVDKLRDLQRQYFQASR 772 (783)
Q Consensus 744 ~~dP~~RPsa~ell~~L~~L~~~~f~~~~ 772 (783)
..+|.+||++.++ ++|+||+..+
T Consensus 254 ~~~p~~Rpt~~~i------l~~~~~~~~~ 276 (285)
T cd06648 254 VRDPAQRATAAEL------LNHPFLAKAG 276 (285)
T ss_pred ccChhhCcCHHHH------ccCcccccCC
Confidence 9999999999999 6789997655
No 313
>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1. Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto
Probab=100.00 E-value=1e-35 Score=315.66 Aligned_cols=253 Identities=27% Similarity=0.497 Sum_probs=216.7
Q ss_pred cceeEeeeeccCCcEEEEEEEEe-CCceEEEEEEecccC-CHHHHHHHHHHHHHHHhCC-CCceeeEeceeecCCceEEE
Q 003963 505 EDLTIGEQIGQGSCGTVYHAVWY-GSQDVAVKVFSRQEY-SDEVIHSFRQEVSLMKRLR-HPNVLLFMGAVTSPQRLCIV 581 (783)
Q Consensus 505 ~~y~i~~~LG~G~fG~Vy~a~~~-~~~~vAiK~i~~~~~-~~~~~~~~~~Ei~il~~l~-HpnIv~l~~~~~~~~~~~lV 581 (783)
++|.+.+.||+|+||.||++.+. .++.|++|++..... .......+.+|+.+++.+. ||||+++++++...+..++|
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv 80 (280)
T cd05581 1 DDFKFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHPGIIKLYYTFQDEENLYFV 80 (280)
T ss_pred CCceEeeeecCCCceEEEEEEEcCCCCEEEEEEechHhccchHHHHHHHHHHHHHHhcccCCCchhHHHHhcCCceEEEE
Confidence 47999999999999999999986 457899999876433 2344567888999999998 99999999999999999999
Q ss_pred EEecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCccccccc-
Q 003963 582 TEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETY- 660 (783)
Q Consensus 582 ~E~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~- 660 (783)
|||+++++|.+++.+.. .+++..++.++.|++.||.|||+++ ++|+||||+||+++.++.++|+|||++.......
T Consensus 81 ~e~~~~~~L~~~l~~~~-~l~~~~~~~i~~ql~~~l~~Lh~~~--~~H~dl~~~ni~i~~~~~~~l~df~~~~~~~~~~~ 157 (280)
T cd05581 81 LEYAPNGELLQYIRKYG-SLDEKCTRFYAAEILLALEYLHSKG--IIHRDLKPENILLDKDMHIKITDFGTAKVLDPNSS 157 (280)
T ss_pred EcCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCC--eeecCCCHHHeEECCCCCEEecCCccccccCCccc
Confidence 99999999999997653 6999999999999999999999998 9999999999999999999999999987554322
Q ss_pred -------------------ccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhcc
Q 003963 661 -------------------LTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFM 721 (783)
Q Consensus 661 -------------------~~~~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~elltG~~Pf~~~~~~~~~~~i~~~ 721 (783)
.......++..|++||++.+..++.++|||||||++++|++|..||........+..+.
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~-- 235 (280)
T cd05581 158 PESNKGDATNIDSQIEKNRRRFASFVGTAEYVSPELLNEKPAGKSSDLWALGCIIYQMLTGKPPFRGSNEYLTFQKIL-- 235 (280)
T ss_pred cccCCCCCccccccccccccccccccCCccccCHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHH--
Confidence 11223457889999999988889999999999999999999999998877655554442
Q ss_pred cccccCCCCCCHHHHHHHHHhhhhCCCCCCCH----HHHHHHHHHHHHHHh
Q 003963 722 NQRLEIPKDVDPRWAAIVESCWHSDPQCRPSF----QELVDKLRDLQRQYF 768 (783)
Q Consensus 722 ~~~~~~~~~~s~~l~~LI~~cL~~dP~~RPsa----~ell~~L~~L~~~~f 768 (783)
.....++..+++.+.+||.+||+.+|.+||++ .++ ++|+||
T Consensus 236 ~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~l------l~~~~~ 280 (280)
T cd05581 236 KLEYSFPPNFPPDAKDLIEKLLVLDPQDRLGVNEGYDEL------KAHPFF 280 (280)
T ss_pred hcCCCCCCccCHHHHHHHHHHhcCCHhhCCCcccCHHHH------hcCCCC
Confidence 34556777889999999999999999999999 777 566765
No 314
>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re
Probab=100.00 E-value=1.1e-35 Score=312.12 Aligned_cols=251 Identities=26% Similarity=0.426 Sum_probs=210.9
Q ss_pred eccCCcEEEEEEEEeC-CceEEEEEEecccC-CHHHHHHHHHHHHHHHhCCCCceeeEeceeecCCceEEEEEecCCCCH
Q 003963 513 IGQGSCGTVYHAVWYG-SQDVAVKVFSRQEY-SDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIVTEFLPRGSL 590 (783)
Q Consensus 513 LG~G~fG~Vy~a~~~~-~~~vAiK~i~~~~~-~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lV~E~~~ggsL 590 (783)
||.|+||.||++.+.. ++.|++|++..... .......+.+|+.+++.++||||+++++.+......|++|||+++++|
T Consensus 1 lg~g~~~~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (265)
T cd05579 1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQSPYVVKLYYSFQGKKNLYLVMEYLPGGDL 80 (265)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEecchhhhhhhHHHHHHHHHHHHHhCCCcchhHHHHheecCcEEEEEEecCCCCcH
Confidence 6899999999999865 67899999876543 234567788999999999999999999999999999999999999999
Q ss_pred HHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCcccccccc--------c
Q 003963 591 FRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETYL--------T 662 (783)
Q Consensus 591 ~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~~--------~ 662 (783)
.+++.+.. .+++..++.++.||+.||.|||+.+ ++|+||+|+||+++.++.++|+|||++........ .
T Consensus 81 ~~~l~~~~-~~~~~~~~~i~~qi~~~L~~lH~~~--i~H~di~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~ 157 (265)
T cd05579 81 ASLLENVG-SLDEDVARIYIAEIVLALEYLHSNG--IIHRDLKPDNILIDSNGHLKLTDFGLSKVGLVRRQINLNDDEKE 157 (265)
T ss_pred HHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHcC--eecCCCCHHHeEEcCCCCEEEEecccchhcccCccccccccccc
Confidence 99997654 6899999999999999999999998 99999999999999999999999999875433211 2
Q ss_pred ccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhcccccccCCCC--CCHHHHHHHH
Q 003963 663 TKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLEIPKD--VDPRWAAIVE 740 (783)
Q Consensus 663 ~~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~--~s~~l~~LI~ 740 (783)
.....++..|++||.+.+...+.++||||||+++|+|++|..||...........+.. .....+.. ++..+.+||.
T Consensus 158 ~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~i~ 235 (265)
T cd05579 158 DKRIVGTPDYIAPEVILGQGHSKTVDWWSLGCILYEFLVGIPPFHGETPEEIFQNILN--GKIEWPEDVEVSDEAIDLIS 235 (265)
T ss_pred ccCcccCccccCHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhc--CCcCCCccccCCHHHHHHHH
Confidence 2234578899999999888899999999999999999999999988877766655543 22333444 4899999999
Q ss_pred HhhhhCCCCCCCHHHHHHHHHHHHHHHhhcC
Q 003963 741 SCWHSDPQCRPSFQELVDKLRDLQRQYFQAS 771 (783)
Q Consensus 741 ~cL~~dP~~RPsa~ell~~L~~L~~~~f~~~ 771 (783)
+||+.+|.+||++..+.+. +.++||+.+
T Consensus 236 ~~l~~~p~~Rpt~~~~~~~---l~~~~~~~~ 263 (265)
T cd05579 236 KLLVPDPEKRLGAKSIEEI---KNHPFFKGI 263 (265)
T ss_pred HHhcCCHhhcCCCccHHHH---hcCccccCC
Confidence 9999999999999443332 679999754
No 315
>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=9.9e-36 Score=318.03 Aligned_cols=254 Identities=28% Similarity=0.434 Sum_probs=209.2
Q ss_pred ccceeEeeeeccCCcEEEEEEEEeC-CceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEeceeecCCceEEEE
Q 003963 504 WEDLTIGEQIGQGSCGTVYHAVWYG-SQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIVT 582 (783)
Q Consensus 504 ~~~y~i~~~LG~G~fG~Vy~a~~~~-~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lV~ 582 (783)
..+|++.++||+|+||.||++.+.. ++.||+|++.... .......+.+|+++++.++||||+++++++.....+++||
T Consensus 4 ~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~-~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 82 (284)
T cd06620 4 NEDLETISDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGA-KSSVRKQILRELQIMHECRSPYIVSFYGAFLNENNICMCM 82 (284)
T ss_pred HHHHHHHHHcCCCCCeEEEEEEEcCCCcEEEEEEEEecC-cchHHHHHHHHHHHHHHcCCCCcceEeeeEecCCEEEEEE
Confidence 4689999999999999999999764 5679999886543 2344567889999999999999999999999999999999
Q ss_pred EecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHh-CCCCEEecCCCCCCEEEcCCCcEEEEecCCCcccccccc
Q 003963 583 EFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHH-CNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETYL 661 (783)
Q Consensus 583 E~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~-~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~~ 661 (783)
||+++++|.+++... ..+++..+..++.+++.+|.|||+ ++ ++|+||||+||+++.++.++|+|||++......
T Consensus 83 e~~~~~~L~~~~~~~-~~~~~~~~~~~~~~i~~~l~~LH~~~~--i~H~dl~p~nil~~~~~~~~l~d~gl~~~~~~~-- 157 (284)
T cd06620 83 EFMDCGSLDRIYKKG-GPIPVEILGKIAVAVVEGLTYLYNVHR--IMHRDIKPSNILVNSRGQIKLCDFGVSGELINS-- 157 (284)
T ss_pred ecCCCCCHHHHHHhc-cCCCHHHHHHHHHHHHHHHHHHHHhcC--eeccCCCHHHEEECCCCcEEEccCCcccchhhh--
Confidence 999999999998764 458999999999999999999997 56 999999999999999999999999998654322
Q ss_pred cccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChH-----------HHHHHhhcccccccCCC-
Q 003963 662 TTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSM-----------QVIGAVGFMNQRLEIPK- 729 (783)
Q Consensus 662 ~~~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~elltG~~Pf~~~~~~-----------~~~~~i~~~~~~~~~~~- 729 (783)
......|+..|+|||++.+..++.++|||||||++|+|++|..||...... .....+. ......++.
T Consensus 158 ~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 236 (284)
T cd06620 158 IADTFVGTSTYMSPERIQGGKYTVKSDVWSLGISIIELALGKFPFAFSNIDDDGQDDPMGILDLLQQIV-QEPPPRLPSS 236 (284)
T ss_pred ccCccccCcccCCHHHHccCCCCccchHHHHHHHHHHHHhCCCCCcccchhhhhhhhhhHHHHHHHHHh-hccCCCCCch
Confidence 122457899999999998888999999999999999999999999765442 1111111 111222333
Q ss_pred CCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhc
Q 003963 730 DVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQA 770 (783)
Q Consensus 730 ~~s~~l~~LI~~cL~~dP~~RPsa~ell~~L~~L~~~~f~~ 770 (783)
.++.++.+||.+||..||.+||++.++ ++++||..
T Consensus 237 ~~~~~~~~li~~~l~~dp~~Rpt~~e~------~~~~~~~~ 271 (284)
T cd06620 237 DFPEDLRDFVDACLLKDPTERPTPQQL------CAMPPFIQ 271 (284)
T ss_pred hcCHHHHHHHHHHhcCCcccCcCHHHH------hcCccccc
Confidence 378899999999999999999999999 55566643
No 316
>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85. Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.
Probab=100.00 E-value=1.2e-35 Score=316.47 Aligned_cols=253 Identities=24% Similarity=0.357 Sum_probs=205.5
Q ss_pred ceeEeeeeccCCcEEEEEEEEeC-CceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEeceeecCCceEEEEEe
Q 003963 506 DLTIGEQIGQGSCGTVYHAVWYG-SQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIVTEF 584 (783)
Q Consensus 506 ~y~i~~~LG~G~fG~Vy~a~~~~-~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lV~E~ 584 (783)
+|++.++||.|++|.||+|.+.. +..||||++...... .....+.+|+.+++.++||||+++++++...+..++||||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 79 (284)
T cd07836 1 NFKQLEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAEE-GTPSTAIREISLMKELKHENIVRLHDVIHTENKLMLVFEY 79 (284)
T ss_pred CceEeeeeccCCceEEEEEEECCCCeEEEEEEecccccc-cchHHHHHHHHHHHhhcCCCEeeeeeeEeeCCcEEEEEec
Confidence 58999999999999999999864 567999998765432 2234567899999999999999999999999999999999
Q ss_pred cCCCCHHHHHhhcC--CcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCccccccccc
Q 003963 585 LPRGSLFRLLQRNT--TKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETYLT 662 (783)
Q Consensus 585 ~~ggsL~~~L~~~~--~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~~~ 662 (783)
+++ +|.+++.... ..+++..+..++.||+.||.|||+.+ |+|+||||+||+++.++.++|+|||++.........
T Consensus 80 ~~~-~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~--i~h~dl~p~ni~~~~~~~~~l~d~g~~~~~~~~~~~ 156 (284)
T cd07836 80 MDK-DLKKYMDTHGVRGALDPNTVKSFTYQLLKGIAFCHENR--VLHRDLKPQNLLINKRGELKLADFGLARAFGIPVNT 156 (284)
T ss_pred CCc-cHHHHHHhcCCCCCcCHHHHHHHHHHHHHHHHHHHHCC--eeeCCCCHHHEEECCCCcEEEeecchhhhhcCCccc
Confidence 975 8988886543 45899999999999999999999998 999999999999999999999999998755443333
Q ss_pred ccCCCCCCcccCcccccCC-CCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccc----------------ccc
Q 003963 663 TKTGKGTPQWMAPEVLRNE-PSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMN----------------QRL 725 (783)
Q Consensus 663 ~~~~~Gt~~Y~aPE~~~~~-~~s~~sDIwSLG~il~elltG~~Pf~~~~~~~~~~~i~~~~----------------~~~ 725 (783)
.....+++.|++||++.+. .++.++|||||||++|+|++|..||...+..+....+.... ...
T Consensus 157 ~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (284)
T cd07836 157 FSNEVVTLWYRAPDVLLGSRTYSTSIDIWSVGCIMAEMITGRPLFPGTNNEDQLLKIFRIMGTPTESTWPGISQLPEYKP 236 (284)
T ss_pred cccccccccccChHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhHHHHhcCchhcc
Confidence 3344578899999998764 46889999999999999999999998766544333221100 000
Q ss_pred -----------cCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHh
Q 003963 726 -----------EIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYF 768 (783)
Q Consensus 726 -----------~~~~~~s~~l~~LI~~cL~~dP~~RPsa~ell~~L~~L~~~~f 768 (783)
.+.+.+++.+.++|.+||+.||.+||++.++ ++++||
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~------l~~~~f 284 (284)
T cd07836 237 TFPRYPPQDLQQLFPHADPLGIDLLHRLLQLNPELRISAHDA------LQHPWF 284 (284)
T ss_pred cccCCChHHHHHHhhhcCcHHHHHHHHHhcCCcccCCCHHHH------hcCCCC
Confidence 0113457889999999999999999999999 566776
No 317
>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=5.5e-35 Score=312.93 Aligned_cols=258 Identities=25% Similarity=0.424 Sum_probs=209.4
Q ss_pred cceeEeeeeccCCcEEEEEEEEeC-CceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEeceeec--CCceEEE
Q 003963 505 EDLTIGEQIGQGSCGTVYHAVWYG-SQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTS--PQRLCIV 581 (783)
Q Consensus 505 ~~y~i~~~LG~G~fG~Vy~a~~~~-~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~--~~~~~lV 581 (783)
++|+..+.||.|++|.||++.+.. ++.||+|.+..... ......+.+|+++++.++||||+++++++.. .+.+|+|
T Consensus 1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv 79 (287)
T cd06621 1 EKIVELSRLGEGAGGSVTKCRLKNTGMIFALKTITTDPN-PDLQKQILRELEINKSCKSPYIVKYYGAFLDESSSSIGIA 79 (287)
T ss_pred CceEEEEEeccCCceEEEEEEECCCCeEEEEEEEecCCc-hHHHHHHHHHHHHHHhCCCCCeeeeeeEEEccCCCeEEEE
Confidence 468899999999999999999854 56799999875433 2445678899999999999999999998854 3468999
Q ss_pred EEecCCCCHHHHHhh---cCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCccccc
Q 003963 582 TEFLPRGSLFRLLQR---NTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHE 658 (783)
Q Consensus 582 ~E~~~ggsL~~~L~~---~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~~ 658 (783)
|||+++++|.+++.. ....+++..+..++.||+.||.|||+.+ ++|+||+|+||+++.++.++|+|||++.....
T Consensus 80 ~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~--i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~ 157 (287)
T cd06621 80 MEYCEGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYLHSRK--IIHRDIKPSNILLTRKGQVKLCDFGVSGELVN 157 (287)
T ss_pred EEecCCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC--cccCCCCHHHEEEecCCeEEEeeccccccccc
Confidence 999999999988753 3455889999999999999999999998 99999999999999999999999999865443
Q ss_pred ccccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCC-----hHHHHHHhhcccccccCC-----
Q 003963 659 TYLTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLN-----SMQVIGAVGFMNQRLEIP----- 728 (783)
Q Consensus 659 ~~~~~~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~elltG~~Pf~~~~-----~~~~~~~i~~~~~~~~~~----- 728 (783)
... ....++..|++||.+.+..++.++|||||||++|+|++|..||.... ..+....+... ....++
T Consensus 158 ~~~--~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 234 (287)
T cd06621 158 SLA--GTFTGTSFYMAPERIQGKPYSITSDVWSLGLTLLEVAQNRFPFPPEGEPPLGPIELLSYIVNM-PNPELKDEPGN 234 (287)
T ss_pred ccc--ccccCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCcccCCCCChHHHHHHHhcC-CchhhccCCCC
Confidence 221 23456889999999999899999999999999999999999997652 22332222211 111111
Q ss_pred -CCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhcCcCC
Q 003963 729 -KDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQASRST 774 (783)
Q Consensus 729 -~~~s~~l~~LI~~cL~~dP~~RPsa~ell~~L~~L~~~~f~~~~~~ 774 (783)
..+++.+.+||.+||..+|.+|||+.++ +.|+||++..+.
T Consensus 235 ~~~~~~~~~~li~~~l~~~p~~Rpt~~ei------l~~~~~~~~~~~ 275 (287)
T cd06621 235 GIKWSEEFKDFIKQCLEKDPTRRPTPWDM------LEHPWIKAQMKK 275 (287)
T ss_pred CCchHHHHHHHHHHHcCCCcccCCCHHHH------HhCccccccccc
Confidence 2356789999999999999999999999 788999766553
No 318
>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and
Probab=100.00 E-value=1.5e-35 Score=323.70 Aligned_cols=259 Identities=26% Similarity=0.349 Sum_probs=214.6
Q ss_pred ceeEeeeeccCCcEEEEEEEEeC-CceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEeceeecCC-----ceE
Q 003963 506 DLTIGEQIGQGSCGTVYHAVWYG-SQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQ-----RLC 579 (783)
Q Consensus 506 ~y~i~~~LG~G~fG~Vy~a~~~~-~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~-----~~~ 579 (783)
+|++.+.||.|+||.||+|.+.. ++.|+||++..........+.+.+|+.+++.++||||+++++++.... .+|
T Consensus 1 ~y~i~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~ 80 (330)
T cd07834 1 RYELLKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVFDDLIDAKRILREIKLLRHLRHENIIGLLDILRPPSPEDFNDVY 80 (330)
T ss_pred CceeeeeecCCCCeEEEEEEeCCCCcEEEEEeeccccccchhhhhHHHHHHHHHhcCCcchhhhhhhhcccCcccccceE
Confidence 58999999999999999999865 578999998765433445567889999999999999999999988775 789
Q ss_pred EEEEecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCcccccc
Q 003963 580 IVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHET 659 (783)
Q Consensus 580 lV~E~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~~~ 659 (783)
++|||++ ++|.+++.... .+++..++.++.||+.||+|||+.| |+|+||||.|||++.++.++|+|||++......
T Consensus 81 lv~e~~~-~~l~~~l~~~~-~l~~~~~~~i~~~l~~~l~~LH~~g--i~H~dlkp~nili~~~~~~~L~dfg~~~~~~~~ 156 (330)
T cd07834 81 IVTELME-TDLHKVIKSPQ-PLTDDHIQYFLYQILRGLKYLHSAN--VIHRDLKPSNILVNSNCDLKICDFGLARGVDPD 156 (330)
T ss_pred EEecchh-hhHHHHHhCCC-CCCHHHHHHHHHHHHHHHHHHHhCC--eecCCCCHHHEEEcCCCCEEEcccCceEeeccc
Confidence 9999996 58999887643 7999999999999999999999998 999999999999999999999999998865543
Q ss_pred c---ccccCCCCCCcccCcccccCC-CCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccccc-----------
Q 003963 660 Y---LTTKTGKGTPQWMAPEVLRNE-PSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQR----------- 724 (783)
Q Consensus 660 ~---~~~~~~~Gt~~Y~aPE~~~~~-~~s~~sDIwSLG~il~elltG~~Pf~~~~~~~~~~~i~~~~~~----------- 724 (783)
. .......+++.|+|||++.+. .++.++|+|||||++|+|++|.+||...+..+.+..+......
T Consensus 157 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 236 (330)
T cd07834 157 EDEKGFLTEYVVTRWYRAPELLLSSSRYTKAIDIWSVGCIFAELLTRKPLFPGRDYIDQLNLIVEVLGTPSEEDLKFITS 236 (330)
T ss_pred ccccccccccccccCcCCceeeecccCCCcchhHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHhcCCCChhHhhhccc
Confidence 2 122344678899999999888 7899999999999999999999999877765544332211100
Q ss_pred ------------------ccCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhcCcCC
Q 003963 725 ------------------LEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQASRST 774 (783)
Q Consensus 725 ------------------~~~~~~~s~~l~~LI~~cL~~dP~~RPsa~ell~~L~~L~~~~f~~~~~~ 774 (783)
......++..+.+||.+||.++|.+||++.++ +.|+||+..+..
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~l------l~~~~~~~~~~~ 298 (330)
T cd07834 237 EKARNYLKSLPKKPKKPLSKLFPGASPEAIDLLEKMLVFDPKKRITADEA------LAHPYLAQLHDP 298 (330)
T ss_pred cchhhHHhhcccCCcchhHHhcccCCHHHHHHHHHHccCChhhCCCHHHH------HhCccHHhhccc
Confidence 01123467889999999999999999999999 688999776665
No 319
>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]
Probab=100.00 E-value=5.9e-37 Score=328.44 Aligned_cols=244 Identities=28% Similarity=0.445 Sum_probs=209.9
Q ss_pred eeeeccCCcEEEEEEEEe-CCceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEeceeecCCceEEEEEecCCC
Q 003963 510 GEQIGQGSCGTVYHAVWY-GSQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIVTEFLPRG 588 (783)
Q Consensus 510 ~~~LG~G~fG~Vy~a~~~-~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lV~E~~~gg 588 (783)
.++||.|.||+||-|.++ .++.||||++.+..+.......+++|+.||+.++||.||.+...|+..+.+|+|||-+.|.
T Consensus 569 devLGSGQFG~VYgg~hRktGrdVAvKvIdKlrFp~kqesqlR~EVaILq~l~HPGiV~le~M~ET~ervFVVMEKl~GD 648 (888)
T KOG4236|consen 569 DEVLGSGQFGTVYGGKHRKTGRDVAVKVIDKLRFPTKQESQLRNEVAILQNLHHPGIVNLECMFETPERVFVVMEKLHGD 648 (888)
T ss_pred HhhccCCcceeeecceecccCceeeeeeeecccCCCchHHHHHHHHHHHHhcCCCCeeEEEEeecCCceEEEEehhhcch
Confidence 478999999999999875 4688999999999988877789999999999999999999999999999999999999664
Q ss_pred CHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCC---CcEEEEecCCCcccccccccccC
Q 003963 589 SLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKH---WTVKVGDFGLSRLKHETYLTTKT 665 (783)
Q Consensus 589 sL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~---~~vkL~DFGla~~~~~~~~~~~~ 665 (783)
-|.-+|.....++++....+++.||+-||.|||.++ |+|+||||+|||+... -+|||||||+++.+.+.... .+
T Consensus 649 MLEMILSsEkgRL~er~TkFlvtQIL~ALr~LH~kn--IvHCDLKPENVLLas~~~FPQvKlCDFGfARiIgEksFR-rs 725 (888)
T KOG4236|consen 649 MLEMILSSEKGRLPERITKFLVTQILVALRYLHFKN--IVHCDLKPENVLLASASPFPQVKLCDFGFARIIGEKSFR-RS 725 (888)
T ss_pred HHHHHHHhhcccchHHHHHHHHHHHHHHHHHhhhcc--eeeccCCchheeeccCCCCCceeeccccceeecchhhhh-hh
Confidence 455556666778999999999999999999999998 9999999999999653 47999999999998876433 36
Q ss_pred CCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCCh-HHHHHHhhcccccccCCCCCCHHHHHHHHHhhh
Q 003963 666 GKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNS-MQVIGAVGFMNQRLEIPKDVDPRWAAIVESCWH 744 (783)
Q Consensus 666 ~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~elltG~~Pf~~~~~-~~~~~~i~~~~~~~~~~~~~s~~l~~LI~~cL~ 744 (783)
.+|||.|+|||+++++.|+..-|+||+|+++|--|.|..||..... .+.+.+..+ -.....+.+++++..+||..+|+
T Consensus 726 VVGTPAYLaPEVLrnkGyNrSLDMWSVGVIiYVsLSGTFPFNEdEdIndQIQNAaF-MyPp~PW~eis~~AidlIn~LLq 804 (888)
T KOG4236|consen 726 VVGTPAYLAPEVLRNKGYNRSLDMWSVGVIIYVSLSGTFPFNEDEDINDQIQNAAF-MYPPNPWSEISPEAIDLINNLLQ 804 (888)
T ss_pred hcCCccccCHHHHhhccccccccceeeeEEEEEEecccccCCCccchhHHhhcccc-ccCCCchhhcCHHHHHHHHHHHH
Confidence 6899999999999999999999999999999999999999965433 333333222 23344556789999999999999
Q ss_pred hCCCCCCCHHHHH
Q 003963 745 SDPQCRPSFQELV 757 (783)
Q Consensus 745 ~dP~~RPsa~ell 757 (783)
.+-.+|.|.+..+
T Consensus 805 Vkm~kRysvdk~l 817 (888)
T KOG4236|consen 805 VKMRKRYSVDKSL 817 (888)
T ss_pred HHHHHhcchHhhc
Confidence 9999999998773
No 320
>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of
Probab=100.00 E-value=2.3e-35 Score=314.03 Aligned_cols=249 Identities=24% Similarity=0.370 Sum_probs=204.6
Q ss_pred eccCCcEEEEEEEEeC-CceEEEEEEecccCC-HHHHHHHHHHHHHHHhCCCCceeeEeceeecCCceEEEEEecCCCCH
Q 003963 513 IGQGSCGTVYHAVWYG-SQDVAVKVFSRQEYS-DEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIVTEFLPRGSL 590 (783)
Q Consensus 513 LG~G~fG~Vy~a~~~~-~~~vAiK~i~~~~~~-~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lV~E~~~ggsL 590 (783)
||+|+||.||++.+.. ++.|++|++...... ......+..|+.+++.++||||+++++++...+..|+||||+++++|
T Consensus 1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (277)
T cd05577 1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVSSRFIVSLAYAFETKDDLCLVMTLMNGGDL 80 (277)
T ss_pred CCCCCceeEEEEEEcCCCcEEEEEEEehhhhhhhhhhHHHHHHHHHHHhCCCCCEeeeeeEEecCCeEEEEEecCCCCcH
Confidence 6999999999998764 567999998764432 23345667899999999999999999999999999999999999999
Q ss_pred HHHHhhcC-CcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCcccccccccccCCCCC
Q 003963 591 FRLLQRNT-TKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETYLTTKTGKGT 669 (783)
Q Consensus 591 ~~~L~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~~Gt 669 (783)
.+++.... ..+++..++.++.|++.||.|||+++ ++|+||+|+||+++.++.++|+|||++...... .......++
T Consensus 81 ~~~l~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~--i~H~di~p~Nil~~~~~~~~l~dfg~~~~~~~~-~~~~~~~~~ 157 (277)
T cd05577 81 KYHIYNVGEPGFPEARAIFYAAQIICGLEHLHQRR--IVYRDLKPENVLLDDHGNVRISDLGLAVELKGG-KKIKGRAGT 157 (277)
T ss_pred HHHHHHcCcCCCCHHHHHHHHHHHHHHHHHHHhCC--cccCCCCHHHEEECCCCCEEEccCcchhhhccC-CccccccCC
Confidence 99987543 35899999999999999999999998 999999999999999999999999998755432 222344678
Q ss_pred CcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHh--hcccccccCCCCCCHHHHHHHHHhhhhCC
Q 003963 670 PQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAV--GFMNQRLEIPKDVDPRWAAIVESCWHSDP 747 (783)
Q Consensus 670 ~~Y~aPE~~~~~~~s~~sDIwSLG~il~elltG~~Pf~~~~~~~~~~~i--~~~~~~~~~~~~~s~~l~~LI~~cL~~dP 747 (783)
..|++||++.+..++.++|||||||++|+|++|+.||...........+ .........+..+++.+.++|.+||+.+|
T Consensus 158 ~~y~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p 237 (277)
T cd05577 158 PGYMAPEVLQGEVYDFSVDWFALGCTLYEMIAGRSPFRQRKEKVEKEELKRRTLEMAVEYPDKFSPEAKDLCEALLQKDP 237 (277)
T ss_pred CCcCCHHHhcCCCCCchhhhHHHHHHHHHHhhCCCCCCCCcccccHHHHHhccccccccCCccCCHHHHHHHHHHccCCh
Confidence 8999999999888999999999999999999999999765431111111 11223445667789999999999999999
Q ss_pred CCCC-----CHHHHHHHHHHHHHHHhhc
Q 003963 748 QCRP-----SFQELVDKLRDLQRQYFQA 770 (783)
Q Consensus 748 ~~RP-----sa~ell~~L~~L~~~~f~~ 770 (783)
.+|| ++.++ +.|+||+.
T Consensus 238 ~~R~~~~~~~~~~l------l~h~~~~~ 259 (277)
T cd05577 238 EKRLGCRGGSADEV------REHPLFKD 259 (277)
T ss_pred hHccCCCcccHHHH------HhChhhhc
Confidence 9999 66666 56888854
No 321
>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase. Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.
Probab=100.00 E-value=2.7e-35 Score=313.24 Aligned_cols=250 Identities=22% Similarity=0.320 Sum_probs=200.8
Q ss_pred eeEeeeeccCCcEEEEEEEEeC-CceEEEEEEecccCCHHHHHHHHHHHHHHHhCC-CCceeeEeceeecC--CceEEEE
Q 003963 507 LTIGEQIGQGSCGTVYHAVWYG-SQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLR-HPNVLLFMGAVTSP--QRLCIVT 582 (783)
Q Consensus 507 y~i~~~LG~G~fG~Vy~a~~~~-~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~-HpnIv~l~~~~~~~--~~~~lV~ 582 (783)
|++.++||+|+||.||++.+.. ++.||+|++.......... ...+|+.++.++. |+||+++++++... +.+++||
T Consensus 1 y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~-~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~lv~ 79 (282)
T cd07831 1 YKILGKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFKSLEQV-NNLREIQALRRLSPHPNILRLIEVLFDRKTGRLALVF 79 (282)
T ss_pred CceEeeccccccceEEEEEEcCCCcEEEEEEehhccCCchhh-hHHHHHHHHhhcCCCCCccceEEEEecCCCCcEEEEE
Confidence 6789999999999999999764 5679999987653333322 3346888888885 99999999999887 8899999
Q ss_pred EecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCccccccccc
Q 003963 583 EFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETYLT 662 (783)
Q Consensus 583 E~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~~~ 662 (783)
||++ ++|.+++......+++..++.++.||+.||.|||+.+ |+|+||||+||+++. +.+||+|||++........
T Consensus 80 e~~~-~~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~--i~H~dl~p~ni~l~~-~~~kl~dfg~~~~~~~~~~- 154 (282)
T cd07831 80 ELMD-MNLYELIKGRKRPLPEKRVKSYMYQLLKSLDHMHRNG--IFHRDIKPENILIKD-DILKLADFGSCRGIYSKPP- 154 (282)
T ss_pred ecCC-ccHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCC--ceecccCHHHEEEcC-CCeEEEecccccccccCCC-
Confidence 9996 5888888765567899999999999999999999998 999999999999999 9999999999876543322
Q ss_pred ccCCCCCCcccCcccccC-CCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccc----------------ccc
Q 003963 663 TKTGKGTPQWMAPEVLRN-EPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMN----------------QRL 725 (783)
Q Consensus 663 ~~~~~Gt~~Y~aPE~~~~-~~~s~~sDIwSLG~il~elltG~~Pf~~~~~~~~~~~i~~~~----------------~~~ 725 (783)
.....++..|+|||.+.. ..++.++|||||||++|+|++|.+||...+.......+.... ...
T Consensus 155 ~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slGv~l~el~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (282)
T cd07831 155 YTEYISTRWYRAPECLLTDGYYGPKMDIWAVGCVFFEILSLFPLFPGTNELDQIAKIHDVLGTPDAEVLKKFRKSRHMNY 234 (282)
T ss_pred cCCCCCCcccCChhHhhcCCCCCcchhHHHHHHHHHHHHcCCcCCCCCCHHHHHHHHHHHcCCCCHHHHHhhcccccccc
Confidence 123457899999997654 556889999999999999999999998776554333221100 001
Q ss_pred c-----------CCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHh
Q 003963 726 E-----------IPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYF 768 (783)
Q Consensus 726 ~-----------~~~~~s~~l~~LI~~cL~~dP~~RPsa~ell~~L~~L~~~~f 768 (783)
. +...++..+.+||.+||.++|.+||++.++ ++|+||
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~------l~~~~~ 282 (282)
T cd07831 235 NFPSKKGTGLRKLLPNASAEGLDLLKKLLAYDPDERITAKQA------LRHPYF 282 (282)
T ss_pred cCcccccccHHHHcccccHHHHHHHHHHhccCcccccCHHHH------hhCCCC
Confidence 1 123567899999999999999999999999 567775
No 322
>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi
Probab=100.00 E-value=2e-35 Score=315.46 Aligned_cols=249 Identities=23% Similarity=0.395 Sum_probs=199.7
Q ss_pred eeccCCcEEEEEEEEeC-CceEEEEEEecccCCH-HHHHHHHHHHHHHH---hCCCCceeeEeceeecCCceEEEEEecC
Q 003963 512 QIGQGSCGTVYHAVWYG-SQDVAVKVFSRQEYSD-EVIHSFRQEVSLMK---RLRHPNVLLFMGAVTSPQRLCIVTEFLP 586 (783)
Q Consensus 512 ~LG~G~fG~Vy~a~~~~-~~~vAiK~i~~~~~~~-~~~~~~~~Ei~il~---~l~HpnIv~l~~~~~~~~~~~lV~E~~~ 586 (783)
.||+|+||.||++.+.. ++.||+|++....... .....+.+|..+++ ..+||||+.+++++...+..++||||++
T Consensus 1 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~ 80 (279)
T cd05633 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMTYAFHTPDKLCFILDLMN 80 (279)
T ss_pred CcccCCCeEEEEEEECCCCcEEEEEEEEccccccchHHHHHHHHHHHHHHHhhCCCCcEeEEEEEEecCCeEEEEEecCC
Confidence 48999999999999864 5689999987654332 11223344444433 4479999999999999999999999999
Q ss_pred CCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCcccccccccccCC
Q 003963 587 RGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETYLTTKTG 666 (783)
Q Consensus 587 ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~ 666 (783)
+++|.+++..+ ..+++..+..++.|++.||.|||+++ |+|+||||+|||++.++.++|+|||++...... .....
T Consensus 81 ~~~L~~~i~~~-~~l~~~~~~~i~~qi~~al~~lH~~~--ivH~dikp~Nil~~~~~~~~l~dfg~~~~~~~~--~~~~~ 155 (279)
T cd05633 81 GGDLHYHLSQH-GVFSEKEMRFYATEIILGLEHMHNRF--VVYRDLKPANILLDEHGHVRISDLGLACDFSKK--KPHAS 155 (279)
T ss_pred CCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCC--cCCCCCCHHHEEECCCCCEEEccCCcceecccc--CccCc
Confidence 99999998764 35899999999999999999999998 999999999999999999999999998654332 12234
Q ss_pred CCCCcccCccccc-CCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHH--HHHHhhcccccccCCCCCCHHHHHHHHHhh
Q 003963 667 KGTPQWMAPEVLR-NEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQ--VIGAVGFMNQRLEIPKDVDPRWAAIVESCW 743 (783)
Q Consensus 667 ~Gt~~Y~aPE~~~-~~~~s~~sDIwSLG~il~elltG~~Pf~~~~~~~--~~~~i~~~~~~~~~~~~~s~~l~~LI~~cL 743 (783)
.|++.|+|||.+. +..++.++|||||||++|+|++|..||....... ..... .......++..+++++.++|.+||
T Consensus 156 ~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~li~~~l 234 (279)
T cd05633 156 VGTHGYMAPEVLQKGTAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRM-TLTVNVELPDSFSPELKSLLEGLL 234 (279)
T ss_pred CCCcCccCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcCCCCCcCHHHHHHH-hhcCCcCCccccCHHHHHHHHHHh
Confidence 6899999999986 4568899999999999999999999997543221 11111 122345567789999999999999
Q ss_pred hhCCCCCC-----CHHHHHHHHHHHHHHHhhcCc
Q 003963 744 HSDPQCRP-----SFQELVDKLRDLQRQYFQASR 772 (783)
Q Consensus 744 ~~dP~~RP-----sa~ell~~L~~L~~~~f~~~~ 772 (783)
..||.+|| ++.++ ++|+||+...
T Consensus 235 ~~~p~~R~~~~~~~~~~~------~~h~~~~~~~ 262 (279)
T cd05633 235 QRDVSKRLGCLGRGAQEV------KEHVFFKGID 262 (279)
T ss_pred cCCHHHhcCCCCCCHHHH------HhCccccCCC
Confidence 99999999 59888 7788987643
No 323
>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1. Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron
Probab=100.00 E-value=5.2e-35 Score=318.11 Aligned_cols=248 Identities=31% Similarity=0.450 Sum_probs=208.6
Q ss_pred ccceeEeeeeccCCcEEEEEEEEeC-CceEEEEEEecccC-CHHHHHHHHHHHHHHHhCCCCceeeEeceeecCCceEEE
Q 003963 504 WEDLTIGEQIGQGSCGTVYHAVWYG-SQDVAVKVFSRQEY-SDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIV 581 (783)
Q Consensus 504 ~~~y~i~~~LG~G~fG~Vy~a~~~~-~~~vAiK~i~~~~~-~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lV 581 (783)
.+.|...+.||+|+||.||++.+.. +..||+|++..... ..+....+.+|+.+++.++|||++++++++......++|
T Consensus 24 ~~~f~~~~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv 103 (317)
T cd06635 24 EKLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKHPNSIEYKGCYLREHTAWLV 103 (317)
T ss_pred hhhhhhhheeccCCCeEEEEEEEcCCCcEEEEEEEecCCCCchHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCeEEEE
Confidence 3458889999999999999999754 56799999875432 334556788999999999999999999999999999999
Q ss_pred EEecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCcccccccc
Q 003963 582 TEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETYL 661 (783)
Q Consensus 582 ~E~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~~ 661 (783)
|||+.+ +|.+++.....++++..+..++.||+.||.|||+++ |+|+||+|+||+++.++.++|+|||++.....
T Consensus 104 ~e~~~g-~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~--i~H~dL~p~Nil~~~~~~~kl~dfg~~~~~~~--- 177 (317)
T cd06635 104 MEYCLG-SASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHN--MIHRDIKAGNILLTEPGQVKLADFGSASIASP--- 177 (317)
T ss_pred EeCCCC-CHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC--cccCCCCcccEEECCCCCEEEecCCCccccCC---
Confidence 999964 888888766667899999999999999999999998 99999999999999999999999998865432
Q ss_pred cccCCCCCCcccCccccc---CCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhcccccccCCCCCCHHHHHH
Q 003963 662 TTKTGKGTPQWMAPEVLR---NEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAAI 738 (783)
Q Consensus 662 ~~~~~~Gt~~Y~aPE~~~---~~~~s~~sDIwSLG~il~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~l~~L 738 (783)
.....|++.|+|||.+. +..++.++|||||||++|+|++|..||...........+.........+..+++.+.+|
T Consensus 178 -~~~~~~~~~y~aPE~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 256 (317)
T cd06635 178 -ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPTLQSNEWSDYFRNF 256 (317)
T ss_pred -cccccCCccccChhhhhcCCCCCCCccccHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHhccCCCCCCccccHHHHHH
Confidence 22446789999999874 45678999999999999999999999987766655555433333333445678899999
Q ss_pred HHHhhhhCCCCCCCHHHHHH
Q 003963 739 VESCWHSDPQCRPSFQELVD 758 (783)
Q Consensus 739 I~~cL~~dP~~RPsa~ell~ 758 (783)
|.+||+.+|.+||++.++++
T Consensus 257 i~~~l~~~p~~Rpt~~~il~ 276 (317)
T cd06635 257 VDSCLQKIPQDRPTSEELLK 276 (317)
T ss_pred HHHHccCCcccCcCHHHHHh
Confidence 99999999999999999954
No 324
>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1e-36 Score=323.30 Aligned_cols=260 Identities=23% Similarity=0.342 Sum_probs=218.8
Q ss_pred cccceeEeeeeccCCcEEEEEEEEeC-CceEEEEEEecccCCH-HHHHHHHHHHHHHHhCCCCceeeEeceeecCCceEE
Q 003963 503 LWEDLTIGEQIGQGSCGTVYHAVWYG-SQDVAVKVFSRQEYSD-EVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCI 580 (783)
Q Consensus 503 ~~~~y~i~~~LG~G~fG~Vy~a~~~~-~~~vAiK~i~~~~~~~-~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~l 580 (783)
..+.|..-++||+|+||.||-+.... ++.||+|.+.+..+.. .......+|..||..++.++||.+-.+|+..+.+|+
T Consensus 183 t~n~F~~~RvlGkGGFGEV~acqvraTGKMYAcKkL~KKRiKkr~ge~maLnEk~iL~kV~s~FiVslaYAfeTkd~LCl 262 (591)
T KOG0986|consen 183 TKNTFRVYRVLGKGGFGEVCACQVRATGKMYACKKLDKKRIKKRKGETMALNEKQILEKVSSPFIVSLAYAFETKDALCL 262 (591)
T ss_pred cccceeeeEEEecccccceeEEEEecchhhHHHHHHHHHHHHHhhhhHHhhHHHHHHHHhccCcEEEEeeeecCCCceEE
Confidence 34578888999999999999998765 4669999987766543 233456789999999999999999999999999999
Q ss_pred EEEecCCCCHHHHHhhcC-CcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCcccccc
Q 003963 581 VTEFLPRGSLFRLLQRNT-TKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHET 659 (783)
Q Consensus 581 V~E~~~ggsL~~~L~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~~~ 659 (783)
||..|+||+|.-+|...+ ..++++.++.++.+|+-||.+||+.+ ||+||+||+|||+|+.|+|.|+|+|+|..+...
T Consensus 263 VLtlMNGGDLkfHiyn~g~~gF~e~ra~FYAAEi~cGLehlH~~~--iVYRDLKPeNILLDd~GhvRISDLGLAvei~~g 340 (591)
T KOG0986|consen 263 VLTLMNGGDLKFHIYNHGNPGFDEQRARFYAAEIICGLEHLHRRR--IVYRDLKPENILLDDHGHVRISDLGLAVEIPEG 340 (591)
T ss_pred EEEeecCCceeEEeeccCCCCCchHHHHHHHHHHHhhHHHHHhcc--eeeccCChhheeeccCCCeEeeccceEEecCCC
Confidence 999999999988886544 35999999999999999999999988 999999999999999999999999999877765
Q ss_pred cccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhh--cccccccCCCCCCHHHHH
Q 003963 660 YLTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVG--FMNQRLEIPKDVDPRWAA 737 (783)
Q Consensus 660 ~~~~~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~elltG~~Pf~~~~~~~~~~~i~--~~~~~~~~~~~~s~~l~~ 737 (783)
... ...+||..|||||++.+..|+...|+|||||+||||+.|+.||........-+.+. ......+++...++++++
T Consensus 341 ~~~-~~rvGT~GYMAPEvl~ne~Y~~s~Dwf~lGCllYemi~G~sPFr~~KeKvk~eEvdrr~~~~~~ey~~kFS~eaks 419 (591)
T KOG0986|consen 341 KPI-RGRVGTVGYMAPEVLQNEVYDFSPDWFSLGCLLYEMIAGHSPFRQRKEKVKREEVDRRTLEDPEEYSDKFSEEAKS 419 (591)
T ss_pred Ccc-ccccCcccccCHHHHcCCcccCCccHHHHHhHHHHHHcccCchhhhhhhhhHHHHHHHHhcchhhcccccCHHHHH
Confidence 433 34589999999999999999999999999999999999999997654432222221 133456677889999999
Q ss_pred HHHHhhhhCCCCCC-----CHHHHHHHHHHHHHHHhhcC
Q 003963 738 IVESCWHSDPQCRP-----SFQELVDKLRDLQRQYFQAS 771 (783)
Q Consensus 738 LI~~cL~~dP~~RP-----sa~ell~~L~~L~~~~f~~~ 771 (783)
|.+.+|.+||.+|. ++.++ -+|+||+..
T Consensus 420 lc~~LL~Kdp~~RLGcrg~ga~ev------k~HpfFk~l 452 (591)
T KOG0986|consen 420 LCEGLLTKDPEKRLGCRGEGAQEV------KEHPFFKDL 452 (591)
T ss_pred HHHHHHccCHHHhccCCCcCcchh------hhCcccccC
Confidence 99999999999996 45566 478999754
No 325
>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4. Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates
Probab=100.00 E-value=1.8e-35 Score=316.24 Aligned_cols=258 Identities=26% Similarity=0.396 Sum_probs=205.5
Q ss_pred cceeEeeeeccCCcEEEEEEEEeC-CceEEEEEEecccCCHHHHHHHHHHHHHHHhCC-CCceeeEeceeecCCceEEEE
Q 003963 505 EDLTIGEQIGQGSCGTVYHAVWYG-SQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLR-HPNVLLFMGAVTSPQRLCIVT 582 (783)
Q Consensus 505 ~~y~i~~~LG~G~fG~Vy~a~~~~-~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~-HpnIv~l~~~~~~~~~~~lV~ 582 (783)
++|+..++||+|+||.||++.+.. ++.||+|.+...... .....+.+|+.++.++. ||||+++++++..+...+++|
T Consensus 4 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~e~~~l~~~~~~~~iv~~~~~~~~~~~~~~~~ 82 (288)
T cd06616 4 EDLKDLGEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVDE-KEQKRLLMDLDVVMRSSDCPYIVKFYGALFREGDCWICM 82 (288)
T ss_pred HHhHHHHHhCCCCceEEEEEEECCCCCEEEEEEehhccCh-HHHHHHHHHHHHHHHhcCCCCEeeeeeEEecCCcEEEEE
Confidence 467778899999999999999865 478999998765433 34567888999999996 999999999999999999999
Q ss_pred EecCCCCHHHHHh----hcCCcchHHHHHHHHHHHHHHHHHHHhC-CCCEEecCCCCCCEEEcCCCcEEEEecCCCcccc
Q 003963 583 EFLPRGSLFRLLQ----RNTTKLDWRRRILMALDIARGVSYLHHC-NPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKH 657 (783)
Q Consensus 583 E~~~ggsL~~~L~----~~~~~l~~~~~~~i~~qi~~aL~~LH~~-~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~ 657 (783)
||+. ++|.++.. .....+++..+..++.|++.||+|||+. + |+||||||+|||++.++.++|+|||++....
T Consensus 83 e~~~-~~l~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~--i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~ 159 (288)
T cd06616 83 ELMD-ISLDKFYKYVYEVLKSVIPEEILGKIAVATVKALNYLKEELK--IIHRDVKPSNILLDRNGNIKLCDFGISGQLV 159 (288)
T ss_pred eccc-CCHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhcCC--eeccCCCHHHEEEccCCcEEEeecchhHHhc
Confidence 9995 46655432 1235689999999999999999999974 7 9999999999999999999999999987554
Q ss_pred cccccccCCCCCCcccCcccccCC---CCCchhHHHHHHHHHHHHHcCCCCCCCCChH-HHHHHhhccccccc----CCC
Q 003963 658 ETYLTTKTGKGTPQWMAPEVLRNE---PSDEKSDVYSFGVILWELATEKIPWDNLNSM-QVIGAVGFMNQRLE----IPK 729 (783)
Q Consensus 658 ~~~~~~~~~~Gt~~Y~aPE~~~~~---~~s~~sDIwSLG~il~elltG~~Pf~~~~~~-~~~~~i~~~~~~~~----~~~ 729 (783)
.... .....|++.|+|||++.+. .++.++|||||||++|+|++|+.||...... +....+.. ...+. .+.
T Consensus 160 ~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 237 (288)
T cd06616 160 DSIA-KTRDAGCRPYMAPERIDPSARDGYDVRSDVWSLGITLYEVATGKFPYPKWNSVFDQLTQVVK-GDPPILSNSEER 237 (288)
T ss_pred cCCc-cccccCccCccCHHHhccccccCCcchhhhhHHHHHHHHHHhCCCCchhcchHHHHHhhhcC-CCCCcCCCcCCC
Confidence 3322 2234678999999998876 6789999999999999999999999765421 12112111 11111 223
Q ss_pred CCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhcCcCC
Q 003963 730 DVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQASRST 774 (783)
Q Consensus 730 ~~s~~l~~LI~~cL~~dP~~RPsa~ell~~L~~L~~~~f~~~~~~ 774 (783)
.++.++.+||.+||+++|.+||++.++ +.++||+..+..
T Consensus 238 ~~~~~l~~li~~~l~~~p~~Rpt~~~i------~~~~~~~~~~~~ 276 (288)
T cd06616 238 EFSPSFVNFINLCLIKDESKRPKYKEL------LEHPFIKDYEER 276 (288)
T ss_pred ccCHHHHHHHHHHccCChhhCcCHHHH------hcChhhhchhhc
Confidence 478999999999999999999999999 778999766543
No 326
>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They
Probab=100.00 E-value=2e-35 Score=314.20 Aligned_cols=253 Identities=24% Similarity=0.353 Sum_probs=209.6
Q ss_pred eeEeeeeccCCcEEEEEEEEe-CCceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEeceeecCCceEEEEEec
Q 003963 507 LTIGEQIGQGSCGTVYHAVWY-GSQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIVTEFL 585 (783)
Q Consensus 507 y~i~~~LG~G~fG~Vy~a~~~-~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lV~E~~ 585 (783)
|++.+.||.|++|.||++.+. +++.+++|.+............+.+|+.+++.++|+||+++++++.....+++||||+
T Consensus 1 y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~ 80 (283)
T cd05118 1 YQKLGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFESEGIPKTALREIKLLKELNHPNIIKLLDVFRHKGDLYLVFEFM 80 (283)
T ss_pred CccceeeecCCCceEEEEEcCCCCcEEEEEEeccccccchhHHHHHHHHHHHHHhcCCCcchHHHhhccCCCEEEEEecc
Confidence 567889999999999999875 4577999998776555445567888999999999999999999999999999999999
Q ss_pred CCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCcccccccccccC
Q 003963 586 PRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETYLTTKT 665 (783)
Q Consensus 586 ~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~~~~~~ 665 (783)
++ +|.+++......+++..+..++.||+.||.|||+.+ |+|+||||+||+++.++.++|+|||.+............
T Consensus 81 ~~-~l~~~l~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~--i~H~dl~p~nili~~~~~~~l~df~~~~~~~~~~~~~~~ 157 (283)
T cd05118 81 DT-DLYKLIKDRQRGLPESLIKSYLYQLLQGLAFCHSHG--ILHRDLKPENLLINTEGVLKLADFGLARSFGSPVRPYTH 157 (283)
T ss_pred CC-CHHHHHHhhcccCCHHHHHHHHHHHHHHHHHHHHCC--eeecCcCHHHEEECCCCcEEEeeeeeeEecCCCcccccC
Confidence 65 898888776567999999999999999999999998 999999999999999999999999998766554322233
Q ss_pred CCCCCcccCcccccCC-CCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccccc--------------------
Q 003963 666 GKGTPQWMAPEVLRNE-PSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQR-------------------- 724 (783)
Q Consensus 666 ~~Gt~~Y~aPE~~~~~-~~s~~sDIwSLG~il~elltG~~Pf~~~~~~~~~~~i~~~~~~-------------------- 724 (783)
..++..|+|||.+.+. .++.++|+|||||++|+|++|+.||...+..+.+..+......
T Consensus 158 ~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (283)
T cd05118 158 YVVTRWYRAPELLLGDKGYSTPVDIWSVGCIFAELLSRRPLFPGKSEIDQLFKIFRTLGTPDPEVWPKFTSLARNYKFSF 237 (283)
T ss_pred ccCcccccCcHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCchHhcccchhhhhhhhhhh
Confidence 4578899999998877 6899999999999999999999999877655443322110000
Q ss_pred --------ccCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHh
Q 003963 725 --------LEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYF 768 (783)
Q Consensus 725 --------~~~~~~~s~~l~~LI~~cL~~dP~~RPsa~ell~~L~~L~~~~f 768 (783)
..+...++.++.+||.+||.+||.+||++.++ +.++||
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~l------l~~~~~ 283 (283)
T cd05118 238 PKKAGMPLPKLFPNASPQALDLLSQMLHYDPHKRITAEQA------LAHPYF 283 (283)
T ss_pred ccccccCHHHhhhhhCHHHHHHHHHHhccCcccCcCHHHH------hhCCCC
Confidence 01223467899999999999999999999999 566665
No 327
>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage
Probab=100.00 E-value=5.9e-35 Score=309.54 Aligned_cols=246 Identities=27% Similarity=0.451 Sum_probs=194.7
Q ss_pred eeeccCCcEEEEEEEEeCCc---eEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEeceeecCCceEEEEEecCC
Q 003963 511 EQIGQGSCGTVYHAVWYGSQ---DVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIVTEFLPR 587 (783)
Q Consensus 511 ~~LG~G~fG~Vy~a~~~~~~---~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lV~E~~~g 587 (783)
++||+|+||.||++...... .+++|.+.... .......+.+|+.+++.++||||+++++.+......|+||||+++
T Consensus 1 ~~lg~G~~g~v~~~~~~~~~~~~~~~~k~~~~~~-~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~ 79 (268)
T cd05086 1 QEIGNGWFGKVLLSEIYTDTGVARVVVKELKANA-SSKEQNEFLQQGDPYRILQHPNILQCLGQCVEAIPYLLVFEYCEL 79 (268)
T ss_pred CcCCCCcCceEEEEEEEcCCCcceEEEEEecCCC-ChHHHHHHHHHHHHHhccCCcchhheEEEecCCCccEEEEecCCC
Confidence 36999999999999765443 35666655433 233456788999999999999999999999999999999999999
Q ss_pred CCHHHHHhhcC---CcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCcccccc--ccc
Q 003963 588 GSLFRLLQRNT---TKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHET--YLT 662 (783)
Q Consensus 588 gsL~~~L~~~~---~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~~~--~~~ 662 (783)
++|.+++.... ...+...++.++.||+.||+|||+.+ |+|+||||+|||++.++.++|+|||++...... ...
T Consensus 80 ~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~--i~H~dikp~nil~~~~~~~~l~Dfg~~~~~~~~~~~~~ 157 (268)
T cd05086 80 GDLKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHMHKHN--FLHSDLALRNCFLTSDLTVKVGDYGIGPSRYKEDYIET 157 (268)
T ss_pred CcHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCC--eeccCCccceEEEcCCccEEecccccccccCcchhhhc
Confidence 99999997532 33567778889999999999999988 999999999999999999999999987542221 112
Q ss_pred ccCCCCCCcccCcccccC-------CCCCchhHHHHHHHHHHHHHc-CCCCCCCCChHHHHHHhhccc----ccccCCCC
Q 003963 663 TKTGKGTPQWMAPEVLRN-------EPSDEKSDVYSFGVILWELAT-EKIPWDNLNSMQVIGAVGFMN----QRLEIPKD 730 (783)
Q Consensus 663 ~~~~~Gt~~Y~aPE~~~~-------~~~s~~sDIwSLG~il~ellt-G~~Pf~~~~~~~~~~~i~~~~----~~~~~~~~ 730 (783)
.....++..|+|||++.. ..++.++|||||||++|+|++ |..||........+..+.... ....++..
T Consensus 158 ~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (268)
T cd05086 158 EDDKCVPLRWLAPELVGEFHGGLITAEQTKPSNVWALGVTLWELFENAAQPYSHLSDREVLNHVIKDQQVKLFKPQLELP 237 (268)
T ss_pred ccCCcCcccccCchhcccccCccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhhcccccCCCccCCC
Confidence 234567889999998753 235779999999999999997 678998777665554432111 12334456
Q ss_pred CCHHHHHHHHHhhhhCCCCCCCHHHHHHHH
Q 003963 731 VDPRWAAIVESCWHSDPQCRPSFQELVDKL 760 (783)
Q Consensus 731 ~s~~l~~LI~~cL~~dP~~RPsa~ell~~L 760 (783)
+++.+.+++..|| .+|++||++.++++.|
T Consensus 238 ~~~~~~~l~~~c~-~~P~~Rp~~~~i~~~l 266 (268)
T cd05086 238 YSERWYEVLQFCW-LSPEKRATAEEVHRLL 266 (268)
T ss_pred CcHHHHHHHHHHh-hCcccCCCHHHHHHHh
Confidence 7899999999999 6799999999998776
No 328
>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati
Probab=100.00 E-value=2.4e-35 Score=323.61 Aligned_cols=261 Identities=25% Similarity=0.327 Sum_probs=209.1
Q ss_pred ccceeEeeeeccCCcEEEEEEEEeC-CceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEeceeecC-----Cc
Q 003963 504 WEDLTIGEQIGQGSCGTVYHAVWYG-SQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSP-----QR 577 (783)
Q Consensus 504 ~~~y~i~~~LG~G~fG~Vy~a~~~~-~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~-----~~ 577 (783)
..+|.+.++||+|+||.||++.+.. ++.||||.+............+.+|+.+++.++|+||+++++++... ..
T Consensus 4 ~~~y~~~~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni~~~~~~~~~~~~~~~~~ 83 (337)
T cd07858 4 DTKYVPIKPIGRGAYGIVCSAKNSETNEKVAIKKIANAFDNRIDAKRTLREIKLLRHLDHENVIAIKDIMPPPHREAFND 83 (337)
T ss_pred ccceeEEEEeccCCCeEEEEEEecCCCCeEEEEEecccccccchhHHHHHHHHHHHhcCCCCccchHHheecccccccCc
Confidence 3579999999999999999999754 57899999876433333345677899999999999999999988654 34
Q ss_pred eEEEEEecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCcccc
Q 003963 578 LCIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKH 657 (783)
Q Consensus 578 ~~lV~E~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~ 657 (783)
+|+||||+. ++|.+++... ..+++..++.++.||+.||.|||+++ ++|+||||+|||++.++.+||+|||++....
T Consensus 84 ~~lv~e~~~-~~L~~~~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~~--i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~ 159 (337)
T cd07858 84 VYIVYELMD-TDLHQIIRSS-QTLSDDHCQYFLYQLLRGLKYIHSAN--VLHRDLKPSNLLLNANCDLKICDFGLARTTS 159 (337)
T ss_pred EEEEEeCCC-CCHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHhCC--EecCCCCHHHEEEcCCCCEEECcCccccccC
Confidence 899999995 6899988754 46899999999999999999999998 9999999999999999999999999997654
Q ss_pred cccccccCCCCCCcccCcccccC-CCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccc--------------
Q 003963 658 ETYLTTKTGKGTPQWMAPEVLRN-EPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMN-------------- 722 (783)
Q Consensus 658 ~~~~~~~~~~Gt~~Y~aPE~~~~-~~~s~~sDIwSLG~il~elltG~~Pf~~~~~~~~~~~i~~~~-------------- 722 (783)
..........++..|+|||.+.+ ..++.++|||||||++|+|++|++||...+.......+....
T Consensus 160 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (337)
T cd07858 160 EKGDFMTEYVVTRWYRAPELLLNCSEYTTAIDVWSVGCIFAELLGRKPLFPGKDYVHQLKLITELLGSPSEEDLGFIRNE 239 (337)
T ss_pred CCcccccccccccCccChHHHhcCCCCCCcccHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCChHHhhhcCch
Confidence 43222334467889999998765 468899999999999999999999997665432222111000
Q ss_pred ----------c-----cccCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhcCcCC
Q 003963 723 ----------Q-----RLEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQASRST 774 (783)
Q Consensus 723 ----------~-----~~~~~~~~s~~l~~LI~~cL~~dP~~RPsa~ell~~L~~L~~~~f~~~~~~ 774 (783)
. .......+++++.+||.+||+.+|.+||++.++ ++|+||+..+..
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rps~~el------l~h~~~~~~~~~ 300 (337)
T cd07858 240 KARRYIRSLPYTPRQSFARLFPHANPLAIDLLEKMLVFDPSKRITVEEA------LAHPYLASLHDP 300 (337)
T ss_pred hhhHHHHhcCcccccCHHHHcccCCHHHHHHHHHHhcCChhhccCHHHH------HcCcchhhhcCc
Confidence 0 011234678999999999999999999999999 678888665443
No 329
>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho
Probab=100.00 E-value=6.7e-35 Score=308.07 Aligned_cols=250 Identities=30% Similarity=0.505 Sum_probs=210.2
Q ss_pred cceeEeeeeccCCcEEEEEEEEeC-CceEEEEEEeccc---CCHHHHHHHHHHHHHHHhCCCCceeeEeceeecC--Cce
Q 003963 505 EDLTIGEQIGQGSCGTVYHAVWYG-SQDVAVKVFSRQE---YSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSP--QRL 578 (783)
Q Consensus 505 ~~y~i~~~LG~G~fG~Vy~a~~~~-~~~vAiK~i~~~~---~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~--~~~ 578 (783)
.+|.+.+.||+|+||.||++.+.. +..|++|++.... ........+.+|+.+++.++|+||+++++++... ..+
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (264)
T cd06653 2 VNWRLGKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDRIVQYYGCLRDPEEKKL 81 (264)
T ss_pred CceeeeeeEccCCCeEEEEEEEcCCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHcCCCCcceEEEEEEcCCCCEE
Confidence 479999999999999999999754 5679999875432 1234556888999999999999999999998764 458
Q ss_pred EEEEEecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCccccc
Q 003963 579 CIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHE 658 (783)
Q Consensus 579 ~lV~E~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~~ 658 (783)
+++|||+++++|.+++.... .+++..++.++.||+.||.|||+.+ |+|+||||+||+++.++.++|+|||++.....
T Consensus 82 ~~v~e~~~~~~L~~~~~~~~-~l~~~~~~~~~~~i~~al~~LH~~~--i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~ 158 (264)
T cd06653 82 SIFVEYMPGGSIKDQLKAYG-ALTENVTRRYTRQILQGVSYLHSNM--IVHRDIKGANILRDSAGNVKLGDFGASKRIQT 158 (264)
T ss_pred EEEEEeCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHhCC--EecCCCCHHHEEEcCCCCEEECcccccccccc
Confidence 89999999999999987643 4788899999999999999999998 99999999999999999999999999875432
Q ss_pred cc---ccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhcccccccCCCCCCHHH
Q 003963 659 TY---LTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRW 735 (783)
Q Consensus 659 ~~---~~~~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~l 735 (783)
.. .......|+..|+|||.+.+..++.++|+|||||++|+|++|+.||...........+........+|..+++.+
T Consensus 159 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~ 238 (264)
T cd06653 159 ICMSGTGIKSVTGTPYWMSPEVISGEGYGRKADVWSVACTVVEMLTEKPPWAEYEAMAAIFKIATQPTKPMLPDGVSDAC 238 (264)
T ss_pred ccccCccccccCCcccccCHhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCccCHHHHHHHHHcCCCCCCCCcccCHHH
Confidence 21 111234578999999999998899999999999999999999999988776665555544444566788899999
Q ss_pred HHHHHHhhhhCCCCCCCHHHHHH
Q 003963 736 AAIVESCWHSDPQCRPSFQELVD 758 (783)
Q Consensus 736 ~~LI~~cL~~dP~~RPsa~ell~ 758 (783)
.++|.+||. +|..||++.+++.
T Consensus 239 ~~~i~~~l~-~~~~r~~~~~~~~ 260 (264)
T cd06653 239 RDFLKQIFV-EEKRRPTAEFLLR 260 (264)
T ss_pred HHHHHHHhc-CcccCccHHHHhc
Confidence 999999999 4799999999853
No 330
>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the
Probab=100.00 E-value=1.9e-35 Score=319.94 Aligned_cols=254 Identities=24% Similarity=0.366 Sum_probs=200.1
Q ss_pred ceeEeeeeccCCcEEEEEEEEeC---CceEEEEEEecccC-CHHHHHHHHHHHHHHHhCCCCceeeEeceeecC--CceE
Q 003963 506 DLTIGEQIGQGSCGTVYHAVWYG---SQDVAVKVFSRQEY-SDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSP--QRLC 579 (783)
Q Consensus 506 ~y~i~~~LG~G~fG~Vy~a~~~~---~~~vAiK~i~~~~~-~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~--~~~~ 579 (783)
.|.+.++||+|+||.||+|.+.. ++.||||++..... .......+.+|+.+++.++||||+++++++... ..++
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 80 (316)
T cd07842 1 KYEIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELKHENVVSLVEVFLEHADKSVY 80 (316)
T ss_pred CceEEEEeccCCcEEEEEEEecCCCCCCeEEEEEeccccccccCccHHHHHHHHHHHhcCCCCccceEEEEeCCCCceEE
Confidence 48899999999999999999865 47899999876431 122335677899999999999999999999888 7899
Q ss_pred EEEEecCCCCHHHHHhhc----CCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcC----CCcEEEEecC
Q 003963 580 IVTEFLPRGSLFRLLQRN----TTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDK----HWTVKVGDFG 651 (783)
Q Consensus 580 lV~E~~~ggsL~~~L~~~----~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~----~~~vkL~DFG 651 (783)
+||||+++ +|.+++... ...+++..++.++.||+.||+|||+.+ |+||||||+|||++. ++.+||+|||
T Consensus 81 lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~--i~h~dlkp~Nil~~~~~~~~~~~kl~Dfg 157 (316)
T cd07842 81 LLFDYAEH-DLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLHSNW--VLHRDLKPANILVMGEGPERGVVKIGDLG 157 (316)
T ss_pred EEEeCCCc-CHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHHHhCC--EeeCCCCHHHEEEcCCCCccceEEECCCc
Confidence 99999964 777776432 235889999999999999999999998 999999999999999 8999999999
Q ss_pred CCcccccccc---cccCCCCCCcccCcccccCC-CCCchhHHHHHHHHHHHHHcCCCCCCCCChHH---------HHHHh
Q 003963 652 LSRLKHETYL---TTKTGKGTPQWMAPEVLRNE-PSDEKSDVYSFGVILWELATEKIPWDNLNSMQ---------VIGAV 718 (783)
Q Consensus 652 la~~~~~~~~---~~~~~~Gt~~Y~aPE~~~~~-~~s~~sDIwSLG~il~elltG~~Pf~~~~~~~---------~~~~i 718 (783)
++........ ......+++.|+|||++.+. .++.++|||||||++|+|++|.+||....... .+..+
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (316)
T cd07842 158 LARLFNAPLKPLADLDPVVVTIWYRAPELLLGARHYTKAIDIWAIGCIFAELLTLEPIFKGREAKIKKSNPFQRDQLERI 237 (316)
T ss_pred cccccCCCcccccccCCccccccccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhcCCCCcCCcccccccchhHHHHHHHH
Confidence 9886543322 22234678899999988764 57899999999999999999999997544321 00000
Q ss_pred -hc-----------------------ccccccCC-----------CCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHH
Q 003963 719 -GF-----------------------MNQRLEIP-----------KDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDL 763 (783)
Q Consensus 719 -~~-----------------------~~~~~~~~-----------~~~s~~l~~LI~~cL~~dP~~RPsa~ell~~L~~L 763 (783)
.. .......+ ...+.++.++|.+||+.||++|||+.++ +
T Consensus 238 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~ei------l 311 (316)
T cd07842 238 FEVLGTPTEKDWPDIKKMPEYDTLMKDFKTKTYPSNSLAKWMEKHKKPDSQGFDLLRKLLEYDPTKRITAEEA------L 311 (316)
T ss_pred HHHhCCCchhHHHHHhhcccchhhhhhccCCCCCCccHHHHHHhccCCCHHHHHHHHHHhcCCcccCcCHHHH------h
Confidence 00 00001111 1567789999999999999999999999 6
Q ss_pred HHHHh
Q 003963 764 QRQYF 768 (783)
Q Consensus 764 ~~~~f 768 (783)
.|+||
T Consensus 312 ~~~~f 316 (316)
T cd07842 312 EHPYF 316 (316)
T ss_pred cCCCC
Confidence 67776
No 331
>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]
Probab=100.00 E-value=2.1e-36 Score=338.07 Aligned_cols=264 Identities=31% Similarity=0.518 Sum_probs=235.7
Q ss_pred cccccccceeEeeeeccCCcEEEEEEEEeCC----ceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEeceeec
Q 003963 499 DYEILWEDLTIGEQIGQGSCGTVYHAVWYGS----QDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTS 574 (783)
Q Consensus 499 ~~e~~~~~y~i~~~LG~G~fG~Vy~a~~~~~----~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~ 574 (783)
..|+.....+|.++||.|-||.||+|..+.. ..||||.++... .+.+...|..|+.||-++.||||++|.|+...
T Consensus 623 akEId~s~i~Ie~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~Gy-tekqrrdFL~EAsIMGQFdHPNIIrLEGVVTk 701 (996)
T KOG0196|consen 623 AKEIDPSCVKIEKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAGY-TEKQRRDFLSEASIMGQFDHPNIIRLEGVVTK 701 (996)
T ss_pred hhhcChhheEEEEEEecccccceecccccCCCCcceeEEEeeeccCc-cHHHHhhhhhhhhhcccCCCCcEEEEEEEEec
Confidence 3355566788999999999999999997542 349999987644 56677899999999999999999999999999
Q ss_pred CCceEEEEEecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCc
Q 003963 575 PQRLCIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSR 654 (783)
Q Consensus 575 ~~~~~lV~E~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~ 654 (783)
...+.||.|||+.|+|..+|+.+...+...++..+++.|+.||.||-+++ +|||||.+.||||+.+...|++|||+++
T Consensus 702 s~PvMIiTEyMENGsLDsFLR~~DGqftviQLVgMLrGIAsGMkYLsdm~--YVHRDLAARNILVNsnLvCKVsDFGLSR 779 (996)
T KOG0196|consen 702 SKPVMIITEYMENGSLDSFLRQNDGQFTVIQLVGMLRGIASGMKYLSDMN--YVHRDLAARNILVNSNLVCKVSDFGLSR 779 (996)
T ss_pred CceeEEEhhhhhCCcHHHHHhhcCCceEeehHHHHHHHHHHHhHHHhhcC--chhhhhhhhheeeccceEEEecccccee
Confidence 99999999999999999999998888999999999999999999999999 9999999999999999999999999999
Q ss_pred ccccccccc---cCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCChHHHHHHhhcccccccCCCC
Q 003963 655 LKHETYLTT---KTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELAT-EKIPWDNLNSMQVIGAVGFMNQRLEIPKD 730 (783)
Q Consensus 655 ~~~~~~~~~---~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~ 730 (783)
...+..... ....-..+|.|||.+....++.++||||+|++|||.|+ |..||.++...+++..+. ...+++.|..
T Consensus 780 vledd~~~~ytt~GGKIPiRWTAPEAIa~RKFTsASDVWSyGIVmWEVmSyGERPYWdmSNQdVIkaIe-~gyRLPpPmD 858 (996)
T KOG0196|consen 780 VLEDDPEAAYTTLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIE-QGYRLPPPMD 858 (996)
T ss_pred ecccCCCccccccCCccceeecChhHhhhcccCchhhccccceEEEEecccCCCcccccchHHHHHHHH-hccCCCCCCC
Confidence 775543222 22233579999999999999999999999999999887 999999999999998885 5678888899
Q ss_pred CCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHH
Q 003963 731 VDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQ 766 (783)
Q Consensus 731 ~s~~l~~LI~~cL~~dP~~RPsa~ell~~L~~L~~~ 766 (783)
+|..|.+|+..||++|-.+||.+.+|+..|++|...
T Consensus 859 CP~aL~qLMldCWqkdR~~RP~F~qiV~~lDklIrn 894 (996)
T KOG0196|consen 859 CPAALYQLMLDCWQKDRNRRPKFAQIVSTLDKLIRN 894 (996)
T ss_pred CcHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcC
Confidence 999999999999999999999999999999988654
No 332
>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely
Probab=100.00 E-value=2.9e-35 Score=316.71 Aligned_cols=253 Identities=25% Similarity=0.317 Sum_probs=205.0
Q ss_pred ccccceeEeeeeccCCcEEEEEEEEeC-CceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEeceeecCC----
Q 003963 502 ILWEDLTIGEQIGQGSCGTVYHAVWYG-SQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQ---- 576 (783)
Q Consensus 502 ~~~~~y~i~~~LG~G~fG~Vy~a~~~~-~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~---- 576 (783)
...++|++.++||+|+||.||+|.+.. ++.||+|++............+.+|+.+++.++||||+++++++....
T Consensus 4 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~e~~~~~~l~h~~i~~~~~~~~~~~~~~~ 83 (302)
T cd07864 4 RCVDKFDIIGQIGEGTYGQVYKARDKDTGELVALKKVRLDNEKEGFPITAIREIKILRQLNHRNIVNLKEIVTDKQDALD 83 (302)
T ss_pred hhhhhhheeeeecccCCEEEEEEEECCCCcEEEEEEEeecccccCchHHHHHHHHHHHhCCCCCeeeeeheecCcchhhh
Confidence 445789999999999999999999864 567999998765433333456778999999999999999999987654
Q ss_pred ------ceEEEEEecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEec
Q 003963 577 ------RLCIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDF 650 (783)
Q Consensus 577 ------~~~lV~E~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DF 650 (783)
.+++||||+++ +|..++......+++..++.++.||+.||+|||+.+ |+|+||||+||++++++.+||+||
T Consensus 84 ~~~~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~--i~H~dl~p~nili~~~~~~kl~df 160 (302)
T cd07864 84 FKKDKGAFYLVFEYMDH-DLMGLLESGLVHFSEDHIKSFMKQLLEGLNYCHKKN--FLHRDIKCSNILLNNKGQIKLADF 160 (302)
T ss_pred ccccCCcEEEEEcccCc-cHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC--eecCCCCHHHEEECCCCcEEeCcc
Confidence 78999999975 888888765567899999999999999999999998 999999999999999999999999
Q ss_pred CCCcccccccc-cccCCCCCCcccCcccccCC-CCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhcccccc---
Q 003963 651 GLSRLKHETYL-TTKTGKGTPQWMAPEVLRNE-PSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRL--- 725 (783)
Q Consensus 651 Gla~~~~~~~~-~~~~~~Gt~~Y~aPE~~~~~-~~s~~sDIwSLG~il~elltG~~Pf~~~~~~~~~~~i~~~~~~~--- 725 (783)
|++........ ......++..|++||.+.+. .++.++|||||||++|+|++|++||...+..+.+..+.......
T Consensus 161 g~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (302)
T cd07864 161 GLARLYNSEESRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFTKKPIFQANQELAQLELISRLCGSPCPA 240 (302)
T ss_pred cccccccCCcccccccceeccCccChHHhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChh
Confidence 99876544321 11223457889999988654 46889999999999999999999998776655443332211000
Q ss_pred -------------------------cCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHH
Q 003963 726 -------------------------EIPKDVDPRWAAIVESCWHSDPQCRPSFQELV 757 (783)
Q Consensus 726 -------------------------~~~~~~s~~l~~LI~~cL~~dP~~RPsa~ell 757 (783)
.....+++.+.+||..||..||.+||++.+++
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il 297 (302)
T cd07864 241 VWPDVIKLPYFNTMKPKKQYRRRLREEFSFIPTPALDLLDHMLTLDPSKRCTAEEAL 297 (302)
T ss_pred hcccccccccccccccccccccchhhhcCCCCHHHHHHHHHHccCChhhCCCHHHHh
Confidence 11234688999999999999999999999994
No 333
>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an
Probab=100.00 E-value=7.6e-35 Score=304.80 Aligned_cols=248 Identities=29% Similarity=0.488 Sum_probs=214.5
Q ss_pred ceeEeeeeccCCcEEEEEEEEeC-CceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEeceeecCCceEEEEEe
Q 003963 506 DLTIGEQIGQGSCGTVYHAVWYG-SQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIVTEF 584 (783)
Q Consensus 506 ~y~i~~~LG~G~fG~Vy~a~~~~-~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lV~E~ 584 (783)
+|++.++||.|+||.||++.+.. ++.+++|++............+.+|+.+++.++|+||+++++++......++||||
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~ 80 (256)
T cd08530 1 DFKVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQKEREDAVNEIRILASVNHPNIISYKEAFLDGNKLCIVMEY 80 (256)
T ss_pred CceEeeeecCCCceeEEEEEECCCCCEEEEEEEehhhccHHHHHHHHHHHHHHHhCCCCCchhhhhhhccCCEEEEEehh
Confidence 58899999999999999998754 46799999987665555667788899999999999999999999999999999999
Q ss_pred cCCCCHHHHHhhc---CCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCcccccccc
Q 003963 585 LPRGSLFRLLQRN---TTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETYL 661 (783)
Q Consensus 585 ~~ggsL~~~L~~~---~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~~ 661 (783)
+++++|.+++... ...+++..++.++.|++.||.|||+.+ ++|+||+|.||+++.++.+||+|||++......
T Consensus 81 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lh~~~--i~h~~l~~~ni~~~~~~~~kl~d~g~~~~~~~~-- 156 (256)
T cd08530 81 APFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALHEQK--ILHRDLKSANILLVANDLVKIGDLGISKVLKKN-- 156 (256)
T ss_pred cCCCCHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhCC--cccCCCCcceEEEecCCcEEEeeccchhhhccC--
Confidence 9999999998652 345889999999999999999999998 999999999999999999999999998766544
Q ss_pred cccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhcccccccCCCCCCHHHHHHHHH
Q 003963 662 TTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAAIVES 741 (783)
Q Consensus 662 ~~~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~l~~LI~~ 741 (783)
......+++.|++||.+.+..++.++|+||||+++|+|++|+.||...+.......+. ......++..++.++.++|.+
T Consensus 157 ~~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~li~~ 235 (256)
T cd08530 157 MAKTQIGTPHYMAPEVWKGRPYSYKSDIWSLGCLLYEMATFAPPFEARSMQDLRYKVQ-RGKYPPIPPIYSQDLQNFIRS 235 (256)
T ss_pred CcccccCCccccCHHHHCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHh-cCCCCCCchhhCHHHHHHHHH
Confidence 2233567899999999999989999999999999999999999998887765554443 223344566788999999999
Q ss_pred hhhhCCCCCCCHHHHHH
Q 003963 742 CWHSDPQCRPSFQELVD 758 (783)
Q Consensus 742 cL~~dP~~RPsa~ell~ 758 (783)
||..+|.+||++.++++
T Consensus 236 ~l~~~p~~Rp~~~~~l~ 252 (256)
T cd08530 236 MLQVKPKLRPNCDKILA 252 (256)
T ss_pred HcCCCcccCCCHHHHhc
Confidence 99999999999999953
No 334
>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.5e-36 Score=314.03 Aligned_cols=245 Identities=27% Similarity=0.428 Sum_probs=216.6
Q ss_pred ccccceeEeeeeccCCcEEEEEEEEeCCc-eEEEEEEecccCC-HHHHHHHHHHHHHHHhC-CCCceeeEeceeecCCce
Q 003963 502 ILWEDLTIGEQIGQGSCGTVYHAVWYGSQ-DVAVKVFSRQEYS-DEVIHSFRQEVSLMKRL-RHPNVLLFMGAVTSPQRL 578 (783)
Q Consensus 502 ~~~~~y~i~~~LG~G~fG~Vy~a~~~~~~-~vAiK~i~~~~~~-~~~~~~~~~Ei~il~~l-~HpnIv~l~~~~~~~~~~ 578 (783)
+...+|..+.+||+|+||.|.++..+++. -||||++++...- ++-++--+.|.++|... +-|.+++++.+|+..+.+
T Consensus 346 i~~tDFnFl~VlGKGSFGKVlLaerkgtdELyAiKiLkKDViiQdDDvectm~EKrvLAL~~kppFL~qlHScFQTmDRL 425 (683)
T KOG0696|consen 346 IKATDFNFLMVLGKGSFGKVLLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLVQLHSCFQTMDRL 425 (683)
T ss_pred eeecccceEEEeccCccceeeeecccCcchhhhhhhhccceeeecCcccceehhhhheecCCCCchHHHHHHHhhhhhhe
Confidence 44568899999999999999999987764 5999999876532 22233344577777766 468999999999999999
Q ss_pred EEEEEecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCccccc
Q 003963 579 CIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHE 658 (783)
Q Consensus 579 ~lV~E~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~~ 658 (783)
|+||||+.||+|--.++.- .++.+..+..++.+|+-||-+||++| ||+||||.+|||++.+|+|||+|||+++....
T Consensus 426 yFVMEyvnGGDLMyhiQQ~-GkFKEp~AvFYAaEiaigLFFLh~kg--IiYRDLKLDNvmLd~eGHiKi~DFGmcKEni~ 502 (683)
T KOG0696|consen 426 YFVMEYVNGGDLMYHIQQV-GKFKEPVAVFYAAEIAIGLFFLHSKG--IIYRDLKLDNVMLDSEGHIKIADFGMCKENIF 502 (683)
T ss_pred eeEEEEecCchhhhHHHHh-cccCCchhhhhhHHHHHHhhhhhcCC--eeeeeccccceEeccCCceEeeeccccccccc
Confidence 9999999999998888764 46889999999999999999999999 99999999999999999999999999987666
Q ss_pred ccccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhcccccccCCCCCCHHHHHH
Q 003963 659 TYLTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAAI 738 (783)
Q Consensus 659 ~~~~~~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~l~~L 738 (783)
...++.+.+|||.|+|||++.-.+|+..+|+||+|++|||||.|.+||++.+..+++..| +.....+|+.++.++.++
T Consensus 503 ~~~TTkTFCGTPdYiAPEIi~YqPYgksvDWWa~GVLLyEmlaGQpPFdGeDE~elF~aI--~ehnvsyPKslSkEAv~i 580 (683)
T KOG0696|consen 503 DGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDELFQAI--MEHNVSYPKSLSKEAVAI 580 (683)
T ss_pred CCcceeeecCCCcccccceEEecccccchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHH--HHccCcCcccccHHHHHH
Confidence 667788999999999999999999999999999999999999999999999999999888 445667889999999999
Q ss_pred HHHhhhhCCCCCC
Q 003963 739 VESCWHSDPQCRP 751 (783)
Q Consensus 739 I~~cL~~dP~~RP 751 (783)
++..|.+.|.+|.
T Consensus 581 ckg~ltK~P~kRL 593 (683)
T KOG0696|consen 581 CKGLLTKHPGKRL 593 (683)
T ss_pred HHHHhhcCCcccc
Confidence 9999999999995
No 335
>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do
Probab=100.00 E-value=9.1e-35 Score=305.93 Aligned_cols=251 Identities=25% Similarity=0.358 Sum_probs=204.2
Q ss_pred eeeccCCcEEEEEEEEeC-CceEEEEEEecccCC-HHHHHHHHHHHHHH-HhCCCCceeeEeceeecCCceEEEEEecCC
Q 003963 511 EQIGQGSCGTVYHAVWYG-SQDVAVKVFSRQEYS-DEVIHSFRQEVSLM-KRLRHPNVLLFMGAVTSPQRLCIVTEFLPR 587 (783)
Q Consensus 511 ~~LG~G~fG~Vy~a~~~~-~~~vAiK~i~~~~~~-~~~~~~~~~Ei~il-~~l~HpnIv~l~~~~~~~~~~~lV~E~~~g 587 (783)
+.||.|+||.||+|.+.. ++.||+|++.+.... ......+..|..++ ..++|+||+++++++...+.+|+||||+++
T Consensus 2 ~~l~~g~~~~v~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 81 (260)
T cd05611 2 KPISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAKLYYSFQSKDYLYLVMEYLNG 81 (260)
T ss_pred ccCCcCCCeeEEEEEecCCCCeEEEEEecchhhhHHHHHHHHHHHHHHHhhcCCCCCeeeeeeeEEcCCeEEEEEeccCC
Confidence 579999999999998754 578999998754432 22233444555544 455899999999999999999999999999
Q ss_pred CCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCcccccccccccCCC
Q 003963 588 GSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETYLTTKTGK 667 (783)
Q Consensus 588 gsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~~ 667 (783)
++|.+++... ..+++..+..++.||+.||.|||+.+ ++|+||+|+||+++.++.++|+|||++..... .....
T Consensus 82 ~~L~~~l~~~-~~~~~~~~~~i~~qi~~aL~~lH~~~--i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~----~~~~~ 154 (260)
T cd05611 82 GDCASLIKTL-GGLPEDWAKQYIAEVVLGVEDLHQRG--IIHRDIKPENLLIDQTGHLKLTDFGLSRNGLE----NKKFV 154 (260)
T ss_pred CCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCC--eecCCCCHHHeEECCCCcEEEeecccceeccc----cccCC
Confidence 9999999764 45899999999999999999999998 99999999999999999999999998865433 22446
Q ss_pred CCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhcccc--cccCCCCCCHHHHHHHHHhhhh
Q 003963 668 GTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQ--RLEIPKDVDPRWAAIVESCWHS 745 (783)
Q Consensus 668 Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~elltG~~Pf~~~~~~~~~~~i~~~~~--~~~~~~~~s~~l~~LI~~cL~~ 745 (783)
+++.|++||.+.+..++.++||||||+++|+|++|..||...+.......+..... .......+++.+.++|.+||..
T Consensus 155 ~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~ 234 (260)
T cd05611 155 GTPDYLAPETILGVGDDKMSDWWSLGCVIFEFLFGYPPFHAETPDAVFDNILSRRINWPEEVKEFCSPEAVDLINRLLCM 234 (260)
T ss_pred CCcCccChhhhcCCCCcchhhhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcccCCCCcccccCCHHHHHHHHHHccC
Confidence 78899999999988889999999999999999999999988777665555432221 2223446889999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHhhcC
Q 003963 746 DPQCRPSFQELVDKLRDLQRQYFQAS 771 (783)
Q Consensus 746 dP~~RPsa~ell~~L~~L~~~~f~~~ 771 (783)
+|.+||++.++.+. +.|+||+.+
T Consensus 235 ~p~~R~~~~~~~~~---l~~~~~~~~ 257 (260)
T cd05611 235 DPAKRLGANGYQEI---KSHPFFKSI 257 (260)
T ss_pred CHHHccCCCcHHHH---HcChHhhcC
Confidence 99999976544332 678999765
No 336
>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3. Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co
Probab=100.00 E-value=1.5e-34 Score=314.00 Aligned_cols=254 Identities=31% Similarity=0.461 Sum_probs=210.5
Q ss_pred cceeEeeeeccCCcEEEEEEEEeC-CceEEEEEEecccC-CHHHHHHHHHHHHHHHhCCCCceeeEeceeecCCceEEEE
Q 003963 505 EDLTIGEQIGQGSCGTVYHAVWYG-SQDVAVKVFSRQEY-SDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIVT 582 (783)
Q Consensus 505 ~~y~i~~~LG~G~fG~Vy~a~~~~-~~~vAiK~i~~~~~-~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lV~ 582 (783)
+-|...++||+|+||.||+|.+.. ++.|++|++..... .......+.+|+.+++.++||||+++++++......|+||
T Consensus 21 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 100 (313)
T cd06633 21 EIFVGLHEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKHPNTIEYKGCYLKEHTAWLVM 100 (313)
T ss_pred HHhhcceeeccCCCeEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEE
Confidence 346777889999999999998754 56799999876543 3344567888999999999999999999999999999999
Q ss_pred EecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCccccccccc
Q 003963 583 EFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETYLT 662 (783)
Q Consensus 583 E~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~~~ 662 (783)
||+. ++|.+++.....++++..++.++.||+.+|.|||+++ |+|+||||+||+++.++.++|+|||++.....
T Consensus 101 e~~~-~~l~~~l~~~~~~l~~~~~~~~~~qi~~al~~LH~~g--i~H~dl~p~nili~~~~~~kL~dfg~~~~~~~---- 173 (313)
T cd06633 101 EYCL-GSASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHN--MIHRDIKAGNILLTEPGQVKLADFGSASKSSP---- 173 (313)
T ss_pred ecCC-CCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC--eecCCCChhhEEECCCCCEEEeecCCCcccCC----
Confidence 9995 5888888766667899999999999999999999998 99999999999999999999999998864322
Q ss_pred ccCCCCCCcccCccccc---CCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhcccccccCCCCCCHHHHHHH
Q 003963 663 TKTGKGTPQWMAPEVLR---NEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAAIV 739 (783)
Q Consensus 663 ~~~~~Gt~~Y~aPE~~~---~~~~s~~sDIwSLG~il~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~l~~LI 739 (783)
.....|+..|+|||++. +..++.++|||||||++|+|++|..||...+.......+............++..+.+||
T Consensus 174 ~~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 253 (313)
T cd06633 174 ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNDSPTLQSNEWTDSFRGFV 253 (313)
T ss_pred CCCccccccccChhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCCCCccccCHHHHHHH
Confidence 22456889999999984 456788999999999999999999999887766555444332222223345778899999
Q ss_pred HHhhhhCCCCCCCHHHHHHHHHHHHHHHhhcC
Q 003963 740 ESCWHSDPQCRPSFQELVDKLRDLQRQYFQAS 771 (783)
Q Consensus 740 ~~cL~~dP~~RPsa~ell~~L~~L~~~~f~~~ 771 (783)
.+||+.+|.+||++.++ +.++||...
T Consensus 254 ~~~l~~~P~~Rp~~~~~------l~~~~~~~~ 279 (313)
T cd06633 254 DYCLQKIPQERPASAEL------LRHDFVRRD 279 (313)
T ss_pred HHHccCChhhCcCHHHH------hcCcccCCC
Confidence 99999999999999999 566777543
No 337
>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7. Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it
Probab=100.00 E-value=8.6e-35 Score=312.86 Aligned_cols=264 Identities=27% Similarity=0.438 Sum_probs=210.3
Q ss_pred ccccccceeEeeeeccCCcEEEEEEEEeC-CceEEEEEEecccCCHHHHHHHHHHHHHHHhCC-CCceeeEeceeecCCc
Q 003963 500 YEILWEDLTIGEQIGQGSCGTVYHAVWYG-SQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLR-HPNVLLFMGAVTSPQR 577 (783)
Q Consensus 500 ~e~~~~~y~i~~~LG~G~fG~Vy~a~~~~-~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~-HpnIv~l~~~~~~~~~ 577 (783)
+....++|++.+.||+|+||.||+|.+.. ++.||||++....... ....+..|+.++..+. ||||+++++++.....
T Consensus 10 ~~~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~-~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~ 88 (296)
T cd06618 10 YPADLNDLENLGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTGNKE-ENKRILMDLDVVLKSHDCPYIVKCYGYFITDSD 88 (296)
T ss_pred ccCCcchheeeeEeeccCCeEEEEEEECCCCeEEEEEEEeccCChH-HHHHHHHHHHHHHhccCCCchHhhheeeecCCe
Confidence 34556889999999999999999999875 6789999987654333 3455666777666665 9999999999999999
Q ss_pred eEEEEEecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHh-CCCCEEecCCCCCCEEEcCCCcEEEEecCCCccc
Q 003963 578 LCIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHH-CNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLK 656 (783)
Q Consensus 578 ~~lV~E~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~-~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~ 656 (783)
+|+||||+. ++|..++......+++..+..++.||+.||+|||+ ++ |+|+||+|+||+++.++.+||+|||++...
T Consensus 89 ~~~v~e~~~-~~l~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~--i~H~dl~p~nill~~~~~~kL~dfg~~~~~ 165 (296)
T cd06618 89 VFICMELMS-TCLDKLLKRIQGPIPEDILGKMTVAIVKALHYLKEKHG--VIHRDVKPSNILLDASGNVKLCDFGISGRL 165 (296)
T ss_pred EEEEeeccC-cCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhhCC--EecCCCcHHHEEEcCCCCEEECccccchhc
Confidence 999999995 58888877655678999999999999999999997 57 999999999999999999999999998765
Q ss_pred ccccccccCCCCCCcccCcccccCCC----CCchhHHHHHHHHHHHHHcCCCCCCCCCh-HHHHHHhhccc-ccccCCCC
Q 003963 657 HETYLTTKTGKGTPQWMAPEVLRNEP----SDEKSDVYSFGVILWELATEKIPWDNLNS-MQVIGAVGFMN-QRLEIPKD 730 (783)
Q Consensus 657 ~~~~~~~~~~~Gt~~Y~aPE~~~~~~----~s~~sDIwSLG~il~elltG~~Pf~~~~~-~~~~~~i~~~~-~~~~~~~~ 730 (783)
...... ....++..|+|||.+.+.. ++.++|||||||++|+|++|+.||..... .+.+..+.... ........
T Consensus 166 ~~~~~~-~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (296)
T cd06618 166 VDSKAK-TRSAGCAAYMAPERIDPPDPNPKYDIRADVWSLGISLVELATGQFPYKNCKTEFEVLTKILQEEPPSLPPNEG 244 (296)
T ss_pred cCCCcc-cCCCCCccccCHhhcCCCCCccccccchhHHHHHHHHHHHHhCCCCCCcchhHHHHHHHHhcCCCCCCCCCCC
Confidence 433222 2335788999999987654 78899999999999999999999976433 22222221111 11222234
Q ss_pred CCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhcCcCC
Q 003963 731 VDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQASRST 774 (783)
Q Consensus 731 ~s~~l~~LI~~cL~~dP~~RPsa~ell~~L~~L~~~~f~~~~~~ 774 (783)
++.++.+||.+||..||.+||++.++ ++++||+..+..
T Consensus 245 ~~~~l~~li~~~l~~~p~~Rp~~~~i------l~~~~~~~~~~~ 282 (296)
T cd06618 245 FSPDFCSFVDLCLTKDHRKRPKYREL------LQHPFIRRYETA 282 (296)
T ss_pred CCHHHHHHHHHHccCChhhCCCHHHH------hcChhhhccchh
Confidence 78999999999999999999999999 678888776554
No 338
>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional
Probab=100.00 E-value=7.5e-35 Score=309.00 Aligned_cols=246 Identities=21% Similarity=0.352 Sum_probs=199.6
Q ss_pred cceeEeeee--ccCCcEEEEEEEEeC-CceEEEEEEecccCCHHHHHHHHHHHHHHHhC-CCCceeeEeceeecCCceEE
Q 003963 505 EDLTIGEQI--GQGSCGTVYHAVWYG-SQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRL-RHPNVLLFMGAVTSPQRLCI 580 (783)
Q Consensus 505 ~~y~i~~~L--G~G~fG~Vy~a~~~~-~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l-~HpnIv~l~~~~~~~~~~~l 580 (783)
++|.+.+.+ |.|+||.||++..+. +..+|+|++........ |+.....+ +||||+++++++..++.+|+
T Consensus 14 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~-------e~~~~~~~~~h~~iv~~~~~~~~~~~~~i 86 (267)
T PHA03390 14 KNCEIVKKLKLIDGKFGKVSVLKHKPTQKLFVQKIIKAKNFNAI-------EPMVHQLMKDNPNFIKLYYSVTTLKGHVL 86 (267)
T ss_pred HhhccccceeecCCCceEEEEEEEcCCCcEEEEEEEehhhcchh-------hHHHHHHhhcCCCEEEEEEEEecCCeeEE
Confidence 466666666 999999999999765 46799999876543221 22222222 69999999999999999999
Q ss_pred EEEecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCC-cEEEEecCCCcccccc
Q 003963 581 VTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHW-TVKVGDFGLSRLKHET 659 (783)
Q Consensus 581 V~E~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~-~vkL~DFGla~~~~~~ 659 (783)
||||+++++|.+++.... .+++..++.++.||++||.|||+.+ ++|+||||+||+++.++ .++|+|||++......
T Consensus 87 v~e~~~~~~L~~~l~~~~-~l~~~~~~~~~~qi~~~l~~lH~~~--i~H~dl~p~nil~~~~~~~~~l~dfg~~~~~~~~ 163 (267)
T PHA03390 87 IMDYIKDGDLFDLLKKEG-KLSEAEVKKIIRQLVEALNDLHKHN--IIHNDIKLENVLYDRAKDRIYLCDYGLCKIIGTP 163 (267)
T ss_pred EEEcCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhCC--eeeCCCCHHHEEEeCCCCeEEEecCccceecCCC
Confidence 999999999999997654 7899999999999999999999998 99999999999999988 9999999998755432
Q ss_pred cccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHH--HHHhhcccccccCCCCCCHHHHH
Q 003963 660 YLTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQV--IGAVGFMNQRLEIPKDVDPRWAA 737 (783)
Q Consensus 660 ~~~~~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~elltG~~Pf~~~~~~~~--~~~i~~~~~~~~~~~~~s~~l~~ 737 (783)
....++..|+|||++.+..++.++|||||||++|+|++|..||........ .............+..+++.+.+
T Consensus 164 ----~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (267)
T PHA03390 164 ----SCYDGTLDYFSPEKIKGHNYDVSFDWWAVGVLTYELLTGKHPFKEDEDEELDLESLLKRQQKKLPFIKNVSKNAND 239 (267)
T ss_pred ----ccCCCCCcccChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCcchhhHHHHHHhhcccCCcccccCHHHHH
Confidence 234678999999999998999999999999999999999999975433221 11111122334555679999999
Q ss_pred HHHHhhhhCCCCCCC-HHHHHHHHHHHHHHHhhc
Q 003963 738 IVESCWHSDPQCRPS-FQELVDKLRDLQRQYFQA 770 (783)
Q Consensus 738 LI~~cL~~dP~~RPs-a~ell~~L~~L~~~~f~~ 770 (783)
||.+||+.+|.+||+ ++++ |+|+||++
T Consensus 240 li~~~l~~~p~~R~~~~~~~------l~h~~~~~ 267 (267)
T PHA03390 240 FVQSMLKYNINYRLTNYNEI------IKHPFLKI 267 (267)
T ss_pred HHHHHhccChhhCCchHHHH------hcCCcccC
Confidence 999999999999995 6999 68899874
No 339
>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5. Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the
Probab=100.00 E-value=3.6e-35 Score=321.71 Aligned_cols=257 Identities=21% Similarity=0.352 Sum_probs=206.7
Q ss_pred cceeEeeeeccCCcEEEEEEEEeC-CceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEeceeec----CCceE
Q 003963 505 EDLTIGEQIGQGSCGTVYHAVWYG-SQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTS----PQRLC 579 (783)
Q Consensus 505 ~~y~i~~~LG~G~fG~Vy~a~~~~-~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~----~~~~~ 579 (783)
.+|++.+.||.|+||.||+|.+.. ++.||+|++............+.+|+.+++.++||||+++++++.. ...+|
T Consensus 5 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 84 (334)
T cd07855 5 SRYKPIENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFDVPTLAKRTLRELKILRHFKHDNIIAIRDILRPPGADFKDVY 84 (334)
T ss_pred hceeeeeeeecCCCeEEEEEEEcCCCCEEEEEEeccccccccchHHHHHHHHHHHhcCCCCccCHHHhccccCCCCceEE
Confidence 689999999999999999999764 5789999987654333445677789999999999999999998763 34689
Q ss_pred EEEEecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCcccccc
Q 003963 580 IVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHET 659 (783)
Q Consensus 580 lV~E~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~~~ 659 (783)
+||||+. ++|.+++... ..+++..++.++.||+.||.|||+++ |+||||||+||+++.++.+||+|||++......
T Consensus 85 lv~e~~~-~~l~~~~~~~-~~~~~~~~~~i~~qi~~aL~~LH~~~--ivH~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~ 160 (334)
T cd07855 85 VVMDLME-SDLHHIIHSD-QPLTEEHIRYFLYQLLRGLKYIHSAN--VIHRDLKPSNLLVNEDCELRIGDFGMARGLSSS 160 (334)
T ss_pred EEEehhh-hhHHHHhccC-CCCCHHHHHHHHHHHHHHHHHHHHCC--eecCCCCHHHEEEcCCCcEEecccccceeeccc
Confidence 9999995 6899988654 45899999999999999999999998 999999999999999999999999998755432
Q ss_pred ccc----ccCCCCCCcccCcccccC-CCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhcc-------------
Q 003963 660 YLT----TKTGKGTPQWMAPEVLRN-EPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFM------------- 721 (783)
Q Consensus 660 ~~~----~~~~~Gt~~Y~aPE~~~~-~~~s~~sDIwSLG~il~elltG~~Pf~~~~~~~~~~~i~~~------------- 721 (783)
... .....|+..|+|||++.+ ..++.++|||||||++|+|++|++||...+....+..+...
T Consensus 161 ~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~l~el~~g~~pf~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 240 (334)
T cd07855 161 PTEHKYFMTEYVATRWYRAPELLLSLPEYTTAIDMWSVGCIFAEMLGRRQLFPGKNYVHQLKLILSVLGSPSEEVLNRIG 240 (334)
T ss_pred CcCCCcccccccccccccChHHhcCCcccccccchHHHHHHHHHHHcCCCccCCCChHHHHHHHHHHhCCChhHhhhhhc
Confidence 211 123468899999999865 45789999999999999999999999776543322211110
Q ss_pred -----------ccccc-----CCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhcC
Q 003963 722 -----------NQRLE-----IPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQAS 771 (783)
Q Consensus 722 -----------~~~~~-----~~~~~s~~l~~LI~~cL~~dP~~RPsa~ell~~L~~L~~~~f~~~ 771 (783)
..... +...++.++.++|.+||+.+|.+||++.++ +.|+||+..
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~------l~~~~~~~~ 300 (334)
T cd07855 241 SDRVRKYIQNLPRKQPVPWSKIFPKASPEALDLLSQMLQFDPEERITVEQA------LQHPFLAQY 300 (334)
T ss_pred hhhHHHHHhhcccCCCCCHHHHcccCCHHHHHHHHHHccCChhhCcCHHHH------HhChhhhhc
Confidence 00011 124568899999999999999999999999 678998543
No 340
>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=7.8e-36 Score=329.08 Aligned_cols=254 Identities=33% Similarity=0.577 Sum_probs=223.6
Q ss_pred ccccceeEeeeeccCCcEEEEEEEEeC--C--ceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEeceeecCCc
Q 003963 502 ILWEDLTIGEQIGQGSCGTVYHAVWYG--S--QDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQR 577 (783)
Q Consensus 502 ~~~~~y~i~~~LG~G~fG~Vy~a~~~~--~--~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~ 577 (783)
|..++.++.++||+|.||+|+.|.|.. + -.||||++....... ....|.+|+.+|.+|+|+|++++||+.-+ ..
T Consensus 107 Ipee~i~l~e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~~-~mddflrEas~M~~L~H~hliRLyGvVl~-qp 184 (1039)
T KOG0199|consen 107 IPEEQIKLYELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLNA-IMDDFLREASHMLKLQHPHLIRLYGVVLD-QP 184 (1039)
T ss_pred ccHHHHHHHHHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccch-hHHHHHHHHHHHHhccCcceeEEeeeecc-ch
Confidence 344677888999999999999998854 2 248999998776554 56789999999999999999999999887 77
Q ss_pred eEEEEEecCCCCHHHHHhh-cCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCccc
Q 003963 578 LCIVTEFLPRGSLFRLLQR-NTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLK 656 (783)
Q Consensus 578 ~~lV~E~~~ggsL~~~L~~-~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~ 656 (783)
+.||||++++|+|.+.|.+ ....|.......++.||+.||.||..++ +|||||-..||||.....|||||||+.+-+
T Consensus 185 ~mMV~ELaplGSLldrLrka~~~~llv~~Lcdya~QiA~aM~YLeskr--lvHRDLAARNlllasprtVKI~DFGLmRaL 262 (1039)
T KOG0199|consen 185 AMMVFELAPLGSLLDRLRKAKKAILLVSRLCDYAMQIAKAMQYLESKR--LVHRDLAARNLLLASPRTVKICDFGLMRAL 262 (1039)
T ss_pred hhHHhhhcccchHHHHHhhccccceeHHHHHHHHHHHHHHHHHHhhhh--hhhhhhhhhhheecccceeeeecccceecc
Confidence 8999999999999999987 5566888888899999999999999988 999999999999998889999999999866
Q ss_pred ccc---cccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCChHHHHHHhhcccccccCCCCCC
Q 003963 657 HET---YLTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELAT-EKIPWDNLNSMQVIGAVGFMNQRLEIPKDVD 732 (783)
Q Consensus 657 ~~~---~~~~~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s 732 (783)
... |.......-...|+|||.+....++.++|+|++||+||||++ |..||.+....+++..+. ...++.-|+.++
T Consensus 263 g~ned~Yvm~p~rkvPfAWCaPEsLrh~kFShaSDvWmyGVTiWEMFtyGEePW~G~~g~qIL~~iD-~~erLpRPk~cs 341 (1039)
T KOG0199|consen 263 GENEDMYVMAPQRKVPFAWCAPESLRHRKFSHASDVWMYGVTIWEMFTYGEEPWVGCRGIQILKNID-AGERLPRPKYCS 341 (1039)
T ss_pred CCCCcceEecCCCcCcccccCHhHhccccccccchhhhhhhhHHhhhccCCCCCCCCCHHHHHHhcc-ccccCCCCCCCh
Confidence 543 223333345678999999999999999999999999999999 899999999999999887 677888999999
Q ss_pred HHHHHHHHHhhhhCCCCCCCHHHHHHHH
Q 003963 733 PRWAAIVESCWHSDPQCRPSFQELVDKL 760 (783)
Q Consensus 733 ~~l~~LI~~cL~~dP~~RPsa~ell~~L 760 (783)
.++++++..||..+|.+||++..|.+.+
T Consensus 342 edIY~imk~cWah~paDRptFsair~~~ 369 (1039)
T KOG0199|consen 342 EDIYQIMKNCWAHNPADRPTFSAIREDL 369 (1039)
T ss_pred HHHHHHHHHhccCCccccccHHHHHHhH
Confidence 9999999999999999999999996543
No 341
>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta. Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig
Probab=100.00 E-value=6e-35 Score=319.16 Aligned_cols=256 Identities=26% Similarity=0.411 Sum_probs=203.1
Q ss_pred eeeccC--CcEEEEEEEEe-CCceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEeceeecCCceEEEEEecCC
Q 003963 511 EQIGQG--SCGTVYHAVWY-GSQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIVTEFLPR 587 (783)
Q Consensus 511 ~~LG~G--~fG~Vy~a~~~-~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lV~E~~~g 587 (783)
..||.| +||.||++.+. .++.||+|++..........+.+.+|+.+++.++||||++++++|...+..++||||+.+
T Consensus 4 ~~ig~g~~~~~~v~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~~~~~~v~e~~~~ 83 (328)
T cd08226 4 VEIGRGFCNLTSVYLARHTPTGTLVTVRITDLENCTEEHLKALQNEVVLSHFFRHPNIMTSWTVFTTGSWLWVISPFMAY 83 (328)
T ss_pred HHhCCcccCceeEEEEEEcCCCcEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceEeeeEecCCceEEEEecccC
Confidence 356666 99999999985 457899999987665666668899999999999999999999999999999999999999
Q ss_pred CCHHHHHhhc-CCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCccccccc------
Q 003963 588 GSLFRLLQRN-TTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETY------ 660 (783)
Q Consensus 588 gsL~~~L~~~-~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~------ 660 (783)
++|.+++... ...+++..+..++.||+.||+|||+++ |+||||||+|||++.++.++++||+.+.......
T Consensus 84 ~~l~~~l~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~--ivHrDlkp~Nill~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (328)
T cd08226 84 GSANSLLKTYFPEGMSEALIGNILFGALRGLNYLHQNG--YIHRNIKASHILISGDGLVSLSGLSHLYSLVRNGQKAKVV 161 (328)
T ss_pred CCHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHhCC--eecCCCCHHHEEEeCCCcEEEechHHHhhhhccCcccccc
Confidence 9999998754 235889999999999999999999998 9999999999999999999999998643221110
Q ss_pred -ccccCCCCCCcccCcccccCC--CCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhcccc--------------
Q 003963 661 -LTTKTGKGTPQWMAPEVLRNE--PSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQ-------------- 723 (783)
Q Consensus 661 -~~~~~~~Gt~~Y~aPE~~~~~--~~s~~sDIwSLG~il~elltG~~Pf~~~~~~~~~~~i~~~~~-------------- 723 (783)
.......++..|++||++.+. .++.++|||||||++|+|++|.+||.................
T Consensus 162 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (328)
T cd08226 162 YDFPQFSTSVLPWLSPELLRQDLYGYNVKSDIYSVGITACELATGRVPFQDMLRTQMLLQKLKGPPYSPLDITTFPCEES 241 (328)
T ss_pred ccccccccCccCccChhhhcCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCcChHHHHHHHhcCCCCCCccccccchhhh
Confidence 011122346679999998764 468899999999999999999999987655443322110000
Q ss_pred -------------------------------cccCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhcCc
Q 003963 724 -------------------------------RLEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQASR 772 (783)
Q Consensus 724 -------------------------------~~~~~~~~s~~l~~LI~~cL~~dP~~RPsa~ell~~L~~L~~~~f~~~~ 772 (783)
....+..+++.+.+||++||..||++|||+.++ ++|+||+...
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpta~e~------l~~~~~~~~~ 315 (328)
T cd08226 242 RMKNSQSGVDSGIGESVVAAGMTQTMTSERLRTPSSKTFSPAFQNLVELCLQQDPEKRPSASSL------LSHAFFKQVK 315 (328)
T ss_pred hhccchhhhhcccccchhccccccccccccccchhhhhhhHHHHHHHHHHccCCcccCCCHHHH------hhCHHHHHHH
Confidence 001123356789999999999999999999999 7788886655
Q ss_pred CC
Q 003963 773 ST 774 (783)
Q Consensus 773 ~~ 774 (783)
..
T Consensus 316 ~~ 317 (328)
T cd08226 316 EQ 317 (328)
T ss_pred Hh
Confidence 43
No 342
>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12
Probab=100.00 E-value=1.3e-34 Score=318.65 Aligned_cols=258 Identities=26% Similarity=0.362 Sum_probs=210.0
Q ss_pred cccceeEeeeeccCCcEEEEEEEEeC-CceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEeceeecCC-----
Q 003963 503 LWEDLTIGEQIGQGSCGTVYHAVWYG-SQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQ----- 576 (783)
Q Consensus 503 ~~~~y~i~~~LG~G~fG~Vy~a~~~~-~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~----- 576 (783)
..++|++.+.||+|+||.||++.+.. +..||||++............+.+|+.+++.++||||+++++++..+.
T Consensus 13 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 92 (343)
T cd07880 13 VPDRYRDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMKHENVIGLLDVFTPDLSLDRF 92 (343)
T ss_pred cccceEEEEEeeecCCeEEEEEEECCCCcEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCccceeeeecCCcccccc
Confidence 45789999999999999999998754 567999998665444445567889999999999999999999987654
Q ss_pred -ceEEEEEecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCcc
Q 003963 577 -RLCIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRL 655 (783)
Q Consensus 577 -~~~lV~E~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~ 655 (783)
.+++||||+ +++|.+++.. ..+++..++.++.||+.||.|||+.+ |+||||||+||+++.++.++|+|||++..
T Consensus 93 ~~~~lv~e~~-~~~l~~~~~~--~~l~~~~~~~i~~qi~~al~~LH~~g--i~H~dlkp~Nill~~~~~~kl~dfg~~~~ 167 (343)
T cd07880 93 HDFYLVMPFM-GTDLGKLMKH--EKLSEDRIQFLVYQMLKGLKYIHAAG--IIHRDLKPGNLAVNEDCELKILDFGLARQ 167 (343)
T ss_pred ceEEEEEecC-CCCHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCC--eecCCCCHHHEEEcCCCCEEEeecccccc
Confidence 358999999 7799988864 35889999999999999999999998 99999999999999999999999999875
Q ss_pred cccccccccCCCCCCcccCcccccC-CCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhcccc-----------
Q 003963 656 KHETYLTTKTGKGTPQWMAPEVLRN-EPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQ----------- 723 (783)
Q Consensus 656 ~~~~~~~~~~~~Gt~~Y~aPE~~~~-~~~s~~sDIwSLG~il~elltG~~Pf~~~~~~~~~~~i~~~~~----------- 723 (783)
.... .....+++.|++||.+.+ ..++.++|+|||||++|+|++|..||...+.......+.....
T Consensus 168 ~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (343)
T cd07880 168 TDSE---MTGYVVTRWYRAPEVILNWMHYTQTVDIWSVGCIMAEMLTGKPLFKGHDHLDQLMEIMKVTGTPSKEFVQKLQ 244 (343)
T ss_pred cccC---ccccccCCcccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHhhc
Confidence 5432 223457889999999876 4578999999999999999999999987655433222111000
Q ss_pred ------------------cccCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhcCcCC
Q 003963 724 ------------------RLEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQASRST 774 (783)
Q Consensus 724 ------------------~~~~~~~~s~~l~~LI~~cL~~dP~~RPsa~ell~~L~~L~~~~f~~~~~~ 774 (783)
...+...+++.+.++|.+||..||.+||++.++ +.|+||+..+..
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~t~~~~------l~~~~~~~~~~~ 307 (343)
T cd07880 245 SEDAKNYVKKLPRFRKKDFRSLLPNANPLAVNVLEKMLVLDAESRITAAEA------LAHPYFEEFHDP 307 (343)
T ss_pred chhHHHHHHhccccCcchHHHhccCCChHHHHHHHHHcCCChhhCCCHHHH------hcCccHhhhcCc
Confidence 011224678889999999999999999999999 678999876543
No 343
>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins. Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic
Probab=100.00 E-value=5.5e-35 Score=315.37 Aligned_cols=256 Identities=24% Similarity=0.369 Sum_probs=203.1
Q ss_pred ccceeEeeeeccCCcEEEEEEEEeC-CceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEeceeecC-------
Q 003963 504 WEDLTIGEQIGQGSCGTVYHAVWYG-SQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSP------- 575 (783)
Q Consensus 504 ~~~y~i~~~LG~G~fG~Vy~a~~~~-~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~------- 575 (783)
.++|++.++||.|+||.||+|.+.. ++.|+||++............+.+|+.+++.++||||+++++++...
T Consensus 7 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~ 86 (311)
T cd07866 7 LRDYEILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEKDGFPITALREIKILKKLKHPNVVPLIDMAVERPDKSKRK 86 (311)
T ss_pred cccEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEEeccCCCCcchhHHHHHHHHHhcCCCCccchhhheeccccccccc
Confidence 4799999999999999999999764 57799999876543333334567899999999999999999987543
Q ss_pred -CceEEEEEecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCc
Q 003963 576 -QRLCIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSR 654 (783)
Q Consensus 576 -~~~~lV~E~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~ 654 (783)
..+++||||+.+ +|...+......+++..+..++.||++||.|||+.+ |+|+||||+|||++.++.++|+|||++.
T Consensus 87 ~~~~~lv~~~~~~-~l~~~~~~~~~~~~~~~~~~i~~~l~~al~~lH~~~--i~H~dl~p~nil~~~~~~~~l~dfg~~~ 163 (311)
T cd07866 87 RGSVYMVTPYMDH-DLSGLLENPSVKLTESQIKCYMLQLLEGINYLHENH--ILHRDIKAANILIDNQGILKIADFGLAR 163 (311)
T ss_pred CceEEEEEecCCc-CHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCC--eecCCCCHHHEEECCCCCEEECcCccch
Confidence 346999999954 788887765667999999999999999999999998 9999999999999999999999999987
Q ss_pred ccccccccc-----------cCCCCCCcccCcccccCC-CCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccc
Q 003963 655 LKHETYLTT-----------KTGKGTPQWMAPEVLRNE-PSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMN 722 (783)
Q Consensus 655 ~~~~~~~~~-----------~~~~Gt~~Y~aPE~~~~~-~~s~~sDIwSLG~il~elltG~~Pf~~~~~~~~~~~i~~~~ 722 (783)
......... ....+++.|+|||.+.+. .++.++|||||||++|+|++|++||...+.......+....
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~~g~~~~~~~~~~~~~~~~~~~~ 243 (311)
T cd07866 164 PYDGPPPNPKGGGGGGTRKYTNLVVTRWYRPPELLLGERRYTTAVDIWGIGCVFAEMFTRRPILQGKSDIDQLHLIFKLC 243 (311)
T ss_pred hccCCCcccccCCcccccccccceeccCcCChHHhhCCCccCchhHhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHh
Confidence 544322111 123467889999987654 57899999999999999999999998777655443321110
Q ss_pred cc---------------------ccC-------CCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHh
Q 003963 723 QR---------------------LEI-------PKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYF 768 (783)
Q Consensus 723 ~~---------------------~~~-------~~~~s~~l~~LI~~cL~~dP~~RPsa~ell~~L~~L~~~~f 768 (783)
.. ... ...+++.+.+||.+||..||.+|||+.++ +.|+||
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~t~~el------l~~~~f 311 (311)
T cd07866 244 GTPTEETWPGWRSLPGCEGVHSFTNYPRTLEERFGKLGPEGLDLLSKLLSLDPYKRLTASDA------LEHPYF 311 (311)
T ss_pred CCCChhhchhhhhcccccccccCCCCCccHHHHcccCChhHHHHHHHHcccCcccCcCHHHH------hcCCCC
Confidence 00 000 12345678999999999999999999999 567776
No 344
>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase
Probab=100.00 E-value=8.8e-35 Score=318.90 Aligned_cols=257 Identities=24% Similarity=0.392 Sum_probs=203.5
Q ss_pred ccceeEeeeeccCCcEEEEEEEEeC-CceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEeceeecC-----Cc
Q 003963 504 WEDLTIGEQIGQGSCGTVYHAVWYG-SQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSP-----QR 577 (783)
Q Consensus 504 ~~~y~i~~~LG~G~fG~Vy~a~~~~-~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~-----~~ 577 (783)
.++|++.++||+|+||.||+|.+.. ++.||||++..... ......+.+|+.+++.++||||+++++++... ..
T Consensus 4 ~~~y~i~~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 82 (336)
T cd07849 4 GPRYQNLSYIGEGAYGMVCSATHKPTGVKVAIKKISPFEH-QTFCQRTLREIKILRRFKHENIIGILDIIRPPSFESFND 82 (336)
T ss_pred ccceEEEEEEEecCCeEEEEEEEcCCCCeEEEEEeccccc-chhHHHHHHHHHHHHhCCCCCcCchhheeecccccccce
Confidence 3689999999999999999998754 57899999864322 23445677899999999999999999887543 35
Q ss_pred eEEEEEecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCcccc
Q 003963 578 LCIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKH 657 (783)
Q Consensus 578 ~~lV~E~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~ 657 (783)
.|+||||+. ++|.+++.. ..+++..++.++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||++....
T Consensus 83 ~~lv~e~~~-~~l~~~~~~--~~l~~~~~~~i~~ql~~aL~~LH~~~--ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~ 157 (336)
T cd07849 83 VYIVQELME-TDLYKLIKT--QHLSNDHIQYFLYQILRGLKYIHSAN--VLHRDLKPSNLLLNTNCDLKICDFGLARIAD 157 (336)
T ss_pred EEEEehhcc-cCHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCC--eeccCCCHHHEEECCCCCEEECcccceeecc
Confidence 799999995 588888864 35899999999999999999999998 9999999999999999999999999987543
Q ss_pred cccc---cccCCCCCCcccCcccccC-CCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccc-----------
Q 003963 658 ETYL---TTKTGKGTPQWMAPEVLRN-EPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMN----------- 722 (783)
Q Consensus 658 ~~~~---~~~~~~Gt~~Y~aPE~~~~-~~~s~~sDIwSLG~il~elltG~~Pf~~~~~~~~~~~i~~~~----------- 722 (783)
.... ......|++.|+|||.+.+ ..++.++|||||||++|+|++|+.||...+.......+....
T Consensus 158 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGvil~el~~G~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (336)
T cd07849 158 PEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKAIDIWSVGCILAEMLSNRPLFPGKDYLHQLNLILGVLGTPSQEDLNCI 237 (336)
T ss_pred ccccccCCcCCcCcCCCccChHHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHHh
Confidence 3211 1123467899999998755 567899999999999999999999997655433221110000
Q ss_pred -------------cccc-----CCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhcCc
Q 003963 723 -------------QRLE-----IPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQASR 772 (783)
Q Consensus 723 -------------~~~~-----~~~~~s~~l~~LI~~cL~~dP~~RPsa~ell~~L~~L~~~~f~~~~ 772 (783)
.... ....+++++.+||.+||+.+|++||++.++ +.|+||+...
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~e~------l~hp~~~~~~ 299 (336)
T cd07849 238 ISLRARNYIKSLPFKPKVPWNKLFPNADPKALDLLDKMLTFNPHKRITVEEA------LAHPYLEQYH 299 (336)
T ss_pred hchhhhhHHhhcCcCCcccHHHHhcccCcHHHHHHHHHcCCChhhCcCHHHH------hcCccccccC
Confidence 0000 113467889999999999999999999999 6788887554
No 345
>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po
Probab=100.00 E-value=1.2e-34 Score=308.53 Aligned_cols=253 Identities=26% Similarity=0.362 Sum_probs=206.2
Q ss_pred eeEeeeeccCCcEEEEEEEEeC-CceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEeceeecC--CceEEEEE
Q 003963 507 LTIGEQIGQGSCGTVYHAVWYG-SQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSP--QRLCIVTE 583 (783)
Q Consensus 507 y~i~~~LG~G~fG~Vy~a~~~~-~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~--~~~~lV~E 583 (783)
|++.++||.|+||.||+|.+.. ++.+|+|++............+.+|+.+++.++||||+++++++... +..++|||
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e 80 (287)
T cd07840 1 YEKIAQIGEGTYGQVYKARNKKTGELVALKKIRMENEKEGFPITAIREIKLLQKLRHPNIVRLKEIVTSKGKGSIYMVFE 80 (287)
T ss_pred CeeeEEeccCCCeEEEEEEECCCCeEEEEEEEecccccccchHHHHHHHHHHHhccCCCeeeheeeEecCCCCcEEEEec
Confidence 6788999999999999999865 56799999987643344456778899999999999999999999888 88999999
Q ss_pred ecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCcccccccc-c
Q 003963 584 FLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETYL-T 662 (783)
Q Consensus 584 ~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~~-~ 662 (783)
|+++ +|.+++......+++..++.++.||+.||+|||+.+ ++|+||||+||++++++.++|+|||++........ .
T Consensus 81 ~~~~-~l~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~--~~h~dl~p~nil~~~~~~~~l~d~g~~~~~~~~~~~~ 157 (287)
T cd07840 81 YMDH-DLTGLLDSPEVKFTESQIKCYMKQLLEGLQYLHSNG--ILHRDIKGSNILINNDGVLKLADFGLARPYTKRNSAD 157 (287)
T ss_pred cccc-cHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCC--ceeccCcHHHeEEcCCCCEEEccccceeeccCCCccc
Confidence 9964 899998765567999999999999999999999998 99999999999999999999999999876554321 1
Q ss_pred ccCCCCCCcccCcccccC-CCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccccc-----------------
Q 003963 663 TKTGKGTPQWMAPEVLRN-EPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQR----------------- 724 (783)
Q Consensus 663 ~~~~~Gt~~Y~aPE~~~~-~~~s~~sDIwSLG~il~elltG~~Pf~~~~~~~~~~~i~~~~~~----------------- 724 (783)
.....++..|+|||.+.+ ..++.++|||||||++|+|++|..||...+.......+......
T Consensus 158 ~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (287)
T cd07840 158 YTNRVITLWYRPPELLLGATRYGPEVDMWSVGCILAELFLGKPIFQGSTELEQLEKIFELCGSPTDENWPGVSKLPWFEN 237 (287)
T ss_pred ccccccccccCCceeeEccccCChHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchhhccccccchhhhh
Confidence 123356788999998765 45789999999999999999999999877765544332211000
Q ss_pred ----c--------cCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHh
Q 003963 725 ----L--------EIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYF 768 (783)
Q Consensus 725 ----~--------~~~~~~s~~l~~LI~~cL~~dP~~RPsa~ell~~L~~L~~~~f 768 (783)
. .+...+++.+.++|.+||..+|.+||++.++ +.++||
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~------l~~~~~ 287 (287)
T cd07840 238 LKPKKPYKRRLREFFKHLIDPSALDLLDKLLTLDPKKRISADQA------LQHEYF 287 (287)
T ss_pred ccccccchhHHHHHhcccCCHHHHHHHHHHcCCChhhCcCHHHH------hhCcCC
Confidence 0 0111238889999999999999999999999 556665
No 346
>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co
Probab=100.00 E-value=1.6e-34 Score=308.25 Aligned_cols=249 Identities=23% Similarity=0.364 Sum_probs=199.6
Q ss_pred eeccCCcEEEEEEEEeC-CceEEEEEEecccCCH-HHHHHHHHHH---HHHHhCCCCceeeEeceeecCCceEEEEEecC
Q 003963 512 QIGQGSCGTVYHAVWYG-SQDVAVKVFSRQEYSD-EVIHSFRQEV---SLMKRLRHPNVLLFMGAVTSPQRLCIVTEFLP 586 (783)
Q Consensus 512 ~LG~G~fG~Vy~a~~~~-~~~vAiK~i~~~~~~~-~~~~~~~~Ei---~il~~l~HpnIv~l~~~~~~~~~~~lV~E~~~ 586 (783)
.||+|+||.||++.+.. ++.||+|++....... .....+..|. .+++...||||+++++++...+.+|+||||++
T Consensus 1 ~ig~g~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~ 80 (278)
T cd05606 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMN 80 (278)
T ss_pred CcccCCCeEEEEEEEecCCCEEEEEEeeccccccchhHHHHHHHHHHHHHHHhCCCCcEeeeeeeeecCCEEEEEEecCC
Confidence 48999999999998765 5689999987654332 1112233343 34455679999999999999999999999999
Q ss_pred CCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCcccccccccccCC
Q 003963 587 RGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETYLTTKTG 666 (783)
Q Consensus 587 ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~ 666 (783)
|++|.+++... ..+++..++.++.|++.||.|||+.+ |+|+||||+||+++.++.++|+|||++...... .....
T Consensus 81 g~~L~~~l~~~-~~l~~~~~~~~~~ql~~~l~~lH~~~--i~H~di~p~nili~~~~~~kl~dfg~~~~~~~~--~~~~~ 155 (278)
T cd05606 81 GGDLHYHLSQH-GVFSEAEMRFYAAEIILGLEHMHNRF--VVYRDLKPANILLDEHGHVRISDLGLACDFSKK--KPHAS 155 (278)
T ss_pred CCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCC--EEcCCCCHHHEEECCCCCEEEccCcCccccCcc--CCcCc
Confidence 99999988754 46899999999999999999999998 999999999999999999999999998754332 22345
Q ss_pred CCCCcccCcccccCC-CCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHH-HhhcccccccCCCCCCHHHHHHHHHhhh
Q 003963 667 KGTPQWMAPEVLRNE-PSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIG-AVGFMNQRLEIPKDVDPRWAAIVESCWH 744 (783)
Q Consensus 667 ~Gt~~Y~aPE~~~~~-~~s~~sDIwSLG~il~elltG~~Pf~~~~~~~~~~-~i~~~~~~~~~~~~~s~~l~~LI~~cL~ 744 (783)
.|+..|+|||++.+. .++.++|||||||++|+|++|+.||.......... ..........++..+++++.++|.+||.
T Consensus 156 ~~~~~y~aPE~~~~~~~~~~~~Di~s~G~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~l~ 235 (278)
T cd05606 156 VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELPDSFSPELRSLLEGLLQ 235 (278)
T ss_pred CCCcCCcCcHHhcCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCccchHHHHHHhhccCCCCCCcCCHHHHHHHHHHhh
Confidence 789999999998754 68899999999999999999999997663221111 1111223456677789999999999999
Q ss_pred hCCCCCC-----CHHHHHHHHHHHHHHHhhcC
Q 003963 745 SDPQCRP-----SFQELVDKLRDLQRQYFQAS 771 (783)
Q Consensus 745 ~dP~~RP-----sa~ell~~L~~L~~~~f~~~ 771 (783)
.+|.+|| ++.++ ++|+||+..
T Consensus 236 ~~p~~R~~~~~~~~~~l------l~~~~~~~~ 261 (278)
T cd05606 236 RDVNRRLGCLGRGAQEV------KEHPFFRSL 261 (278)
T ss_pred cCHHhccCCCCCCHHHH------HhCccccCC
Confidence 9999999 99999 568888554
No 347
>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=100.00 E-value=7.9e-36 Score=282.16 Aligned_cols=257 Identities=25% Similarity=0.350 Sum_probs=214.9
Q ss_pred ceeEeeeeccCCcEEEEEEEEeCC-ceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEeceeecCCceEEEEEe
Q 003963 506 DLTIGEQIGQGSCGTVYHAVWYGS-QDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIVTEF 584 (783)
Q Consensus 506 ~y~i~~~LG~G~fG~Vy~a~~~~~-~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lV~E~ 584 (783)
+|.-.++||+|+||+||+++.... +-||+|.++...-++..-....+|+.+|+.++|.|||+++++...+..+.+|+||
T Consensus 3 ~ydkmekigegtygtvfkarn~~t~eivalkrvrlddddegvpssalreicllkelkhknivrl~dvlhsdkkltlvfe~ 82 (292)
T KOG0662|consen 3 KYDKMEKIGEGTYGTVFKARNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFEF 82 (292)
T ss_pred chHHHHhhcCCcceeeEecccCCccceEEEEEEeccCCCCCCcHHHHHHHHHHHHhhhcceeehhhhhccCceeEEeHHH
Confidence 456678999999999999998765 4599999987766555556778999999999999999999999999999999999
Q ss_pred cCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCccccccccccc
Q 003963 585 LPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETYLTTK 664 (783)
Q Consensus 585 ~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~~~~~ 664 (783)
|.. +|..++......++.+.+..++.|+++||.|+|+++ +.|||+||.|+||+.+|.+||+|||+++-+.-+.....
T Consensus 83 cdq-dlkkyfdslng~~d~~~~rsfmlqllrgl~fchshn--vlhrdlkpqnllin~ngelkladfglarafgipvrcys 159 (292)
T KOG0662|consen 83 CDQ-DLKKYFDSLNGDLDPEIVRSFMLQLLRGLGFCHSHN--VLHRDLKPQNLLINRNGELKLADFGLARAFGIPVRCYS 159 (292)
T ss_pred hhH-HHHHHHHhcCCcCCHHHHHHHHHHHHhhhhhhhhhh--hhhccCCcceEEeccCCcEEecccchhhhcCCceEeee
Confidence 954 999999888888999999999999999999999999 99999999999999999999999999998776654445
Q ss_pred CCCCCCcccCcccccCCC-CCchhHHHHHHHHHHHHHc-CCCCCCCCChHHHHHHhhcccccc---------cCC-----
Q 003963 665 TGKGTPQWMAPEVLRNEP-SDEKSDVYSFGVILWELAT-EKIPWDNLNSMQVIGAVGFMNQRL---------EIP----- 728 (783)
Q Consensus 665 ~~~Gt~~Y~aPE~~~~~~-~s~~sDIwSLG~il~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~---------~~~----- 728 (783)
..+-|..|++|.++.|.. |+...|+||.||++.|+.. |++.|.+.+....+..+-...+.+ .+|
T Consensus 160 aevvtlwyrppdvlfgakly~tsidmwsagcifaelanagrplfpg~dvddqlkrif~~lg~p~ed~wps~t~lpdyk~y 239 (292)
T KOG0662|consen 160 AEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEDQWPSMTKLPDYKPY 239 (292)
T ss_pred ceeeeeeccCcceeeeeehhccchHhhhcchHHHHHhhcCCCCCCCCcHHHHHHHHHHHhCCCccccCCccccCCCCccc
Confidence 556799999999998865 7899999999999999997 788888887766555542221110 011
Q ss_pred -------------CCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhcC
Q 003963 729 -------------KDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQAS 771 (783)
Q Consensus 729 -------------~~~s~~l~~LI~~cL~~dP~~RPsa~ell~~L~~L~~~~f~~~ 771 (783)
+.++..-++++.++|.-+|.+|.+++.. ++|+||.-.
T Consensus 240 p~ypattswsqivp~lns~grdllqkll~cnp~qrisaeaa------lqhpyf~d~ 289 (292)
T KOG0662|consen 240 PIYPATTSWSQIVPKLNSTGRDLLQKLLKCNPAQRISAEAA------LQHPYFSDF 289 (292)
T ss_pred CCccccchHHHHhhhhcchhHHHHHHHhccCcccccCHHHH------hcCcccccc
Confidence 1122234889999999999999999988 789998643
No 348
>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check
Probab=100.00 E-value=8.2e-35 Score=306.29 Aligned_cols=253 Identities=28% Similarity=0.472 Sum_probs=208.4
Q ss_pred ceeEeeeeccCCcEEEEEEEEeCC-ceEEEEEEeccc---CCHHHHHHHHHHHHHHHhCCCCceeeEeceeecCCceEEE
Q 003963 506 DLTIGEQIGQGSCGTVYHAVWYGS-QDVAVKVFSRQE---YSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIV 581 (783)
Q Consensus 506 ~y~i~~~LG~G~fG~Vy~a~~~~~-~~vAiK~i~~~~---~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lV 581 (783)
+|.+.++||+|+||.||++.+... ..+++|+++... ........+..|+.+++.++||||+++++++......++|
T Consensus 1 ~y~i~~~ig~g~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 80 (260)
T cd08222 1 RYILQQRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKLDHPAIVKFHASFLERDAFCII 80 (260)
T ss_pred CceeeeeecCCCCceEEEEEecCCCCcceEEEeccccccccCcchHHHHHHHHHHHHhCCCCcHHHHHHHHhcCCceEEE
Confidence 588999999999999999987654 346666654322 2223334567789999999999999999999999999999
Q ss_pred EEecCCCCHHHHHhh---cCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCccccc
Q 003963 582 TEFLPRGSLFRLLQR---NTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHE 658 (783)
Q Consensus 582 ~E~~~ggsL~~~L~~---~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~~ 658 (783)
|||+++++|.+++.. ....+++..++.++.|++.||.|||+.+ ++|+||||+||+++. +.++|+|||++.....
T Consensus 81 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~--i~h~~l~~~nili~~-~~~~l~d~g~~~~~~~ 157 (260)
T cd08222 81 TEYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVHYMHQRR--ILHRDLKAKNIFLKN-NLLKIGDFGVSRLLMG 157 (260)
T ss_pred EEeCCCCCHHHHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcC--ccccCCChhheEeec-CCEeecccCceeecCC
Confidence 999999999998863 3456899999999999999999999998 999999999999976 5799999999876554
Q ss_pred ccccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhcccccccCCCCCCHHHHHH
Q 003963 659 TYLTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAAI 738 (783)
Q Consensus 659 ~~~~~~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~l~~L 738 (783)
.........|++.|+|||.+.+..++.++|+||||+++|+|++|..||...........+. ....+..+..++.++.++
T Consensus 158 ~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l 236 (260)
T cd08222 158 SCDLATTFTGTPYYMSPEALKHQGYDSKSDIWSLGCILYEMCCLAHAFEGQNFLSVVLRIV-EGPTPSLPETYSRQLNSI 236 (260)
T ss_pred CcccccCCCCCcCccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHH-cCCCCCCcchhcHHHHHH
Confidence 4333445568899999999988888999999999999999999999998766655444432 223444566788999999
Q ss_pred HHHhhhhCCCCCCCHHHHHHHHHHHHHHHh
Q 003963 739 VESCWHSDPQCRPSFQELVDKLRDLQRQYF 768 (783)
Q Consensus 739 I~~cL~~dP~~RPsa~ell~~L~~L~~~~f 768 (783)
|.+||..+|.+||++.++ ++|+||
T Consensus 237 i~~~l~~~p~~Rp~~~~i------l~~~~~ 260 (260)
T cd08222 237 MQSMLNKDPSLRPSAAEI------LRNPFI 260 (260)
T ss_pred HHHHhcCChhhCcCHHHH------hhCCCC
Confidence 999999999999999999 566664
No 349
>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both
Probab=100.00 E-value=1.5e-34 Score=308.15 Aligned_cols=252 Identities=27% Similarity=0.345 Sum_probs=203.7
Q ss_pred eeEeeeeccCCcEEEEEEEEeC-CceEEEEEEecccCCHHHHHHHHHHHHHHHhC---CCCceeeEeceeecCCc-----
Q 003963 507 LTIGEQIGQGSCGTVYHAVWYG-SQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRL---RHPNVLLFMGAVTSPQR----- 577 (783)
Q Consensus 507 y~i~~~LG~G~fG~Vy~a~~~~-~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l---~HpnIv~l~~~~~~~~~----- 577 (783)
|++.+.||+|+||.||++.+.. ++.||+|++............+.+|+.+++.+ .||||+++++++.....
T Consensus 1 y~~~~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~~ 80 (287)
T cd07838 1 YEELAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLSEEGIPLSTLREIALLKQLESFEHPNIVRLLDVCHGPRTDRELK 80 (287)
T ss_pred CeEEEEecccCceEEEEEEECCCCCEEEEEEeccccccchhhhhHHHHHHHHHHhhccCCCCcceEEEEEeeccCCCCce
Confidence 6789999999999999999875 57899999975544333445566788877766 59999999999987776
Q ss_pred eEEEEEecCCCCHHHHHhhcC-CcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCccc
Q 003963 578 LCIVTEFLPRGSLFRLLQRNT-TKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLK 656 (783)
Q Consensus 578 ~~lV~E~~~ggsL~~~L~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~ 656 (783)
++++|||+.+ +|.+++.... ..+++..++.++.|++.||.|||+.+ ++|+||+|+||+++.++.++|+|||++...
T Consensus 81 ~~l~~e~~~~-~l~~~l~~~~~~~l~~~~~~~~~~~i~~al~~LH~~~--i~h~~l~~~nili~~~~~~~l~dfg~~~~~ 157 (287)
T cd07838 81 LTLVFEHVDQ-DLATYLSKCPKPGLPPETIKDLMRQLLRGVDFLHSHR--IVHRDLKPQNILVTSDGQVKIADFGLARIY 157 (287)
T ss_pred eEEEehhccc-CHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHCC--eeeccCChhhEEEccCCCEEEeccCcceec
Confidence 9999999964 8999887643 35899999999999999999999998 999999999999999999999999998765
Q ss_pred ccccccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhcccc---c---------
Q 003963 657 HETYLTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQ---R--------- 724 (783)
Q Consensus 657 ~~~~~~~~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~elltG~~Pf~~~~~~~~~~~i~~~~~---~--------- 724 (783)
..... .....++..|+|||++.+..++.++|||||||++|+|++|.+||......+.+..+..... .
T Consensus 158 ~~~~~-~~~~~~~~~~~~PE~~~~~~~~~~~Di~s~G~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (287)
T cd07838 158 SFEMA-LTSVVVTLWYRAPEVLLQSSYATPVDMWSVGCIFAELFRRRPLFRGTSEADQLDKIFDVIGLPSEEEWPRNVSL 236 (287)
T ss_pred cCCcc-cccccccccccChHHhccCCCCCcchhhhHHHHHHHHHhCCCcccCCChHHHHHHHHHHcCCCChHhcCCCccc
Confidence 43321 1233578899999999999999999999999999999999999988776554443311100 0
Q ss_pred -------------ccCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHh
Q 003963 725 -------------LEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYF 768 (783)
Q Consensus 725 -------------~~~~~~~s~~l~~LI~~cL~~dP~~RPsa~ell~~L~~L~~~~f 768 (783)
......+++.+.+||.+||..||.+||++.++ ++|+||
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~i------l~~~~~ 287 (287)
T cd07838 237 PRSSFPSYTPRSFKSFVPEICEEGLDLLKKMLTFNPHKRISAFEA------LQHPYF 287 (287)
T ss_pred chhhcccccccchhhhhhhhhHHHHHHHHHHhccCCccCCCHHHH------hcCcCC
Confidence 00012346788999999999999999999999 566765
No 350
>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the
Probab=100.00 E-value=1.4e-34 Score=301.89 Aligned_cols=245 Identities=28% Similarity=0.447 Sum_probs=210.9
Q ss_pred eccCCcEEEEEEEEeC-CceEEEEEEecccCC-HHHHHHHHHHHHHHHhCCCCceeeEeceeecCCceEEEEEecCCCCH
Q 003963 513 IGQGSCGTVYHAVWYG-SQDVAVKVFSRQEYS-DEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIVTEFLPRGSL 590 (783)
Q Consensus 513 LG~G~fG~Vy~a~~~~-~~~vAiK~i~~~~~~-~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lV~E~~~ggsL 590 (783)
||.|+||.||++.+.. ++.|++|++...... ......+..|+.+++.++||||+++++.+..+...|+||||+++++|
T Consensus 1 lg~G~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L 80 (250)
T cd05123 1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRINHPFIVKLHYAFQTEEKLYLVLEYAPGGEL 80 (250)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEeehhhhcchHHHHHHHHHHHHHHHcCCCcHHHHHHHeecCCeeEEEEecCCCCcH
Confidence 6999999999999864 578999998776543 23566788999999999999999999999999999999999999999
Q ss_pred HHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCcccccccccccCCCCCC
Q 003963 591 FRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETYLTTKTGKGTP 670 (783)
Q Consensus 591 ~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~~Gt~ 670 (783)
.+++.... .+++..++.++.|++.||.|||+.+ ++|+||+|+||+++.++.++|+|||++..............++.
T Consensus 81 ~~~l~~~~-~l~~~~~~~~~~qi~~~l~~lh~~~--~~H~~l~p~ni~~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~ 157 (250)
T cd05123 81 FSHLSKEG-RFSEERARFYAAEIVLALEYLHSLG--IIYRDLKPENILLDADGHIKLTDFGLAKELSSEGSRTNTFCGTP 157 (250)
T ss_pred HHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCC--ceecCCCcceEEEcCCCcEEEeecCcceecccCCCcccCCcCCc
Confidence 99997653 5899999999999999999999988 99999999999999999999999999876544322334456788
Q ss_pred cccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhcccccccCCCCCCHHHHHHHHHhhhhCCCCC
Q 003963 671 QWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAAIVESCWHSDPQCR 750 (783)
Q Consensus 671 ~Y~aPE~~~~~~~s~~sDIwSLG~il~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~l~~LI~~cL~~dP~~R 750 (783)
.|++||.+.+...+.++|+||||+++|+|++|..||...+.......+.. ....++..++..+.++|.+||..||.+|
T Consensus 158 ~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~~i~~~l~~~p~~R 235 (250)
T cd05123 158 EYLAPEVLLGKGYGKAVDWWSLGVLLYEMLTGKPPFYAEDRKEIYEKILK--DPLRFPEFLSPEARDLISGLLQKDPTKR 235 (250)
T ss_pred cccChHHhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhc--CCCCCCCCCCHHHHHHHHHHhcCCHhhC
Confidence 99999999988889999999999999999999999987776555555432 4567788889999999999999999999
Q ss_pred CCH---HHHHHHHHHHHHHHh
Q 003963 751 PSF---QELVDKLRDLQRQYF 768 (783)
Q Consensus 751 Psa---~ell~~L~~L~~~~f 768 (783)
|++ .++ +.|+||
T Consensus 236 ~~~~~~~~l------~~~~~f 250 (250)
T cd05123 236 LGSGGAEEI------KAHPFF 250 (250)
T ss_pred CCcccHHHH------HhCCCC
Confidence 999 566 566665
No 351
>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul
Probab=100.00 E-value=1.1e-34 Score=318.28 Aligned_cols=258 Identities=22% Similarity=0.334 Sum_probs=205.8
Q ss_pred cccceeEeeeeccCCcEEEEEEEEeC-CceEEEEEEecccCCHHHHHHHHHHHHHHHhC-CCCceeeEeceeecC--Cce
Q 003963 503 LWEDLTIGEQIGQGSCGTVYHAVWYG-SQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRL-RHPNVLLFMGAVTSP--QRL 578 (783)
Q Consensus 503 ~~~~y~i~~~LG~G~fG~Vy~a~~~~-~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l-~HpnIv~l~~~~~~~--~~~ 578 (783)
..++|++.+.||+|+||.||+|.+.. ++.+|+|++............+.+|+.+++.+ +||||+++++++... ..+
T Consensus 5 ~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~ni~~~~~~~~~~~~~~~ 84 (337)
T cd07852 5 ILRKYEILQKLGKGAYGIVWKAIDRRTKEVVALKKIFDAFRNATDAQRTFREIMFLQELGDHPNIVKLLNVIKAENDKDI 84 (337)
T ss_pred hhhHHHHhHhhcCCCCeeEEEEEEcCCCeEEEEEeeccccCcchhhhhhhHHHHHHHHhcCCCCccceeeeeccCCCceE
Confidence 45789999999999999999999764 56799998865433334445677899999999 999999999988654 368
Q ss_pred EEEEEecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCccccc
Q 003963 579 CIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHE 658 (783)
Q Consensus 579 ~lV~E~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~~ 658 (783)
|+||||++ ++|..++... .+++..++.++.||+.||.|||+++ |+|+||||+||+++.++.+||+|||++.....
T Consensus 85 ~lv~e~~~-~~L~~~~~~~--~~~~~~~~~i~~qi~~~L~~LH~~~--i~H~dl~p~nill~~~~~~kl~d~g~~~~~~~ 159 (337)
T cd07852 85 YLVFEYME-TDLHAVIRAN--ILEDVHKRYIMYQLLKALKYIHSGN--VIHRDLKPSNILLNSDCRVKLADFGLARSLSE 159 (337)
T ss_pred EEEecccc-cCHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCC--eecCCCCHHHEEEcCCCcEEEeeccchhcccc
Confidence 99999996 5999988754 6888899999999999999999998 99999999999999999999999999875543
Q ss_pred ccc-----cccCCCCCCcccCcccccC-CCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccc----------
Q 003963 659 TYL-----TTKTGKGTPQWMAPEVLRN-EPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMN---------- 722 (783)
Q Consensus 659 ~~~-----~~~~~~Gt~~Y~aPE~~~~-~~~s~~sDIwSLG~il~elltG~~Pf~~~~~~~~~~~i~~~~---------- 722 (783)
... ......|++.|+|||.+.+ ..++.++|||||||++|+|++|++||...........+....
T Consensus 160 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (337)
T cd07852 160 LEENPENPVLTDYVATRWYRAPEILLGSTRYTKGVDMWSVGCILGEMLLGKPLFPGTSTLNQLEKIIEVIGPPSAEDIES 239 (337)
T ss_pred ccccccCcchhcccccccccCceeeeccccccccchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHH
Confidence 221 2223468899999998765 457889999999999999999999997665443322211000
Q ss_pred ----------------c---cccCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhcC
Q 003963 723 ----------------Q---RLEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQAS 771 (783)
Q Consensus 723 ----------------~---~~~~~~~~s~~l~~LI~~cL~~dP~~RPsa~ell~~L~~L~~~~f~~~ 771 (783)
. .....+.++.++.+||.+||+.+|.+|||+.++ ++++||+..
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~Rps~~~i------l~~~~~~~~ 301 (337)
T cd07852 240 IKSPFAATMLDSLPSRPRKPLDELLPKASDDALDLLKKLLVFNPNKRLTAEEA------LEHPYVAQF 301 (337)
T ss_pred HHhhhHHHhhhhcccccccchhhhccCCCHHHHHHHHHhccCCcccccCHHHH------hhChhhhhh
Confidence 0 011123478899999999999999999999999 556777554
No 352
>PHA02882 putative serine/threonine kinase; Provisional
Probab=100.00 E-value=2.6e-34 Score=309.32 Aligned_cols=256 Identities=17% Similarity=0.205 Sum_probs=190.2
Q ss_pred cccccceeEeeeeccCCcEEEEEEEEeCC----ceEEEEEEecccCCH--HH-------HHHHHHHHHHHHhCCCCceee
Q 003963 501 EILWEDLTIGEQIGQGSCGTVYHAVWYGS----QDVAVKVFSRQEYSD--EV-------IHSFRQEVSLMKRLRHPNVLL 567 (783)
Q Consensus 501 e~~~~~y~i~~~LG~G~fG~Vy~a~~~~~----~~vAiK~i~~~~~~~--~~-------~~~~~~Ei~il~~l~HpnIv~ 567 (783)
++..++|++.++||+|+||.||+|.+... ..+++|+........ +. ......+...+..+.|+||++
T Consensus 8 ~i~~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~h~~i~~ 87 (294)
T PHA02882 8 DITGKEWKIDKLIGCGGFGCVYETQCASDHCINNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNIHNIDHLGIPK 87 (294)
T ss_pred ccCCCceEEeeEEecCCCceEEEEEEcCCcccccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHhccCCCCCCCc
Confidence 34557899999999999999999997654 346666543222111 10 011222334455678999999
Q ss_pred EeceeecCC----ceEEEEEecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCC
Q 003963 568 FMGAVTSPQ----RLCIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHW 643 (783)
Q Consensus 568 l~~~~~~~~----~~~lV~E~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~ 643 (783)
+++++.... ..+++|+++ ..++.+.+... ...++..++.++.|++.||+|||+.+ |+||||||+|||++.++
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~--iiHrDiKp~Nill~~~~ 163 (294)
T PHA02882 88 YYGCGSFKRCRMYYRFILLEKL-VENTKEIFKRI-KCKNKKLIKNIMKDMLTTLEYIHEHG--ISHGDIKPENIMVDGNN 163 (294)
T ss_pred EEEeeeEecCCceEEEEEEehh-ccCHHHHHHhh-ccCCHHHHHHHHHHHHHHHHHHHhCC--eecCCCCHHHEEEcCCC
Confidence 998765443 347888888 44777777543 33577888999999999999999998 99999999999999999
Q ss_pred cEEEEecCCCccccccc-------ccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCCh-HHHH
Q 003963 644 TVKVGDFGLSRLKHETY-------LTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNS-MQVI 715 (783)
Q Consensus 644 ~vkL~DFGla~~~~~~~-------~~~~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~elltG~~Pf~~~~~-~~~~ 715 (783)
.++|+|||+++...... .......||+.|+|||++.+..++.++|||||||++|+|++|.+||..... ....
T Consensus 164 ~~~l~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~ape~~~~~~~~~~~DiwSlG~~l~el~~g~~P~~~~~~~~~~~ 243 (294)
T PHA02882 164 RGYIIDYGIASHFIIHGKHIEYSKEQKDLHRGTLYYAGLDAHNGACVTRRGDLESLGYCMLKWAGIKLPWKGFGHNGNLI 243 (294)
T ss_pred cEEEEEcCCceeeccCCcccccccccccccCCCccccCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCccccchHHH
Confidence 99999999997653211 111234689999999999999999999999999999999999999987732 2211
Q ss_pred HH-----hhcccccccCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHH
Q 003963 716 GA-----VGFMNQRLEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKL 760 (783)
Q Consensus 716 ~~-----i~~~~~~~~~~~~~s~~l~~LI~~cL~~dP~~RPsa~ell~~L 760 (783)
.. +............+++.+.+++..||..+|.+||++.+|++.|
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rp~~~~l~~~~ 293 (294)
T PHA02882 244 HAAKCDFIKRLHEGKIKIKNANKFIYDFIECVTKLSYEEKPDYDALIKIF 293 (294)
T ss_pred HHhHHHHHHHhhhhhhccCCCCHHHHHHHHHHHhCCCCCCCCHHHHHHhh
Confidence 11 1111111112345689999999999999999999999998765
No 353
>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=100.00 E-value=2.2e-34 Score=308.44 Aligned_cols=256 Identities=23% Similarity=0.386 Sum_probs=208.9
Q ss_pred ceeEeeeeccCCcEEEEEEEEe----CCceEEEEEEecccCC--HHHHHHHHHHHHHHHhC-CCCceeeEeceeecCCce
Q 003963 506 DLTIGEQIGQGSCGTVYHAVWY----GSQDVAVKVFSRQEYS--DEVIHSFRQEVSLMKRL-RHPNVLLFMGAVTSPQRL 578 (783)
Q Consensus 506 ~y~i~~~LG~G~fG~Vy~a~~~----~~~~vAiK~i~~~~~~--~~~~~~~~~Ei~il~~l-~HpnIv~l~~~~~~~~~~ 578 (783)
+|++.+.||.|+||.||+|... .++.||+|++...... ......+.+|+.+++.+ +|+||+++++++..+..+
T Consensus 1 ~y~~~~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~ 80 (290)
T cd05613 1 NFELLKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTDTKL 80 (290)
T ss_pred CceeeeeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccCCChhceeeEeecCCeE
Confidence 4889999999999999999874 4567999998754321 23345678899999999 599999999999999999
Q ss_pred EEEEEecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCccccc
Q 003963 579 CIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHE 658 (783)
Q Consensus 579 ~lV~E~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~~ 658 (783)
|+||||+++++|.+++... ..+++..+..++.||+.||.|||+.+ ++||||||+|||++.++.++|+|||++.....
T Consensus 81 ~lv~e~~~~~~L~~~l~~~-~~l~~~~~~~~~~qi~~al~~lH~~~--i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~ 157 (290)
T cd05613 81 HLILDYINGGELFTHLSQR-ERFKEQEVQIYSGEIVLALEHLHKLG--IIYRDIKLENILLDSNGHVVLTDFGLSKEFHE 157 (290)
T ss_pred EEEEecCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHhCC--eeccCCCHHHeEECCCCCEEEeeCccceeccc
Confidence 9999999999999999764 45889999999999999999999988 99999999999999999999999999876543
Q ss_pred cc-ccccCCCCCCcccCcccccCC--CCCchhHHHHHHHHHHHHHcCCCCCCCCCh----HHHHHHhhcccccccCCCCC
Q 003963 659 TY-LTTKTGKGTPQWMAPEVLRNE--PSDEKSDVYSFGVILWELATEKIPWDNLNS----MQVIGAVGFMNQRLEIPKDV 731 (783)
Q Consensus 659 ~~-~~~~~~~Gt~~Y~aPE~~~~~--~~s~~sDIwSLG~il~elltG~~Pf~~~~~----~~~~~~i~~~~~~~~~~~~~ 731 (783)
.. .......|+..|++||.+.+. .++.++|||||||++|+|++|..||..... ......+ .......+..+
T Consensus 158 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~--~~~~~~~~~~~ 235 (290)
T cd05613 158 DEVERAYSFCGTIEYMAPDIVRGGDGGHDKAVDWWSMGVLMYELLTGASPFTVDGEKNSQAEISRRI--LKSEPPYPQEM 235 (290)
T ss_pred ccccccccccCCcccCChhhccCCCCCCCccccHHHHHHHHHHHhcCCCCCCcCCccccHHHHHHHh--hccCCCCCccC
Confidence 22 112234688999999998753 367899999999999999999999964322 2222222 22344567778
Q ss_pred CHHHHHHHHHhhhhCCCCCC-----CHHHHHHHHHHHHHHHhhcCc
Q 003963 732 DPRWAAIVESCWHSDPQCRP-----SFQELVDKLRDLQRQYFQASR 772 (783)
Q Consensus 732 s~~l~~LI~~cL~~dP~~RP-----sa~ell~~L~~L~~~~f~~~~ 772 (783)
++.+.+|+.+||..||.+|| ++.++ +.|+||+...
T Consensus 236 ~~~~~~ll~~~l~~~p~~R~~~~~~~~~~l------~~~~~~~~~~ 275 (290)
T cd05613 236 SALAKDIIQRLLMKDPKKRLGCGPSDADEI------KKHPFFQKIN 275 (290)
T ss_pred CHHHHHHHHHHhcCCHHHhcCCCCCCHHHH------HcCcccccCC
Confidence 99999999999999999997 77888 6788887664
No 354
>PTZ00024 cyclin-dependent protein kinase; Provisional
Probab=100.00 E-value=1.9e-34 Score=315.96 Aligned_cols=263 Identities=23% Similarity=0.321 Sum_probs=209.1
Q ss_pred ccee-EeeeeccCCcEEEEEEEEe-CCceEEEEEEecccCCHH------------HHHHHHHHHHHHHhCCCCceeeEec
Q 003963 505 EDLT-IGEQIGQGSCGTVYHAVWY-GSQDVAVKVFSRQEYSDE------------VIHSFRQEVSLMKRLRHPNVLLFMG 570 (783)
Q Consensus 505 ~~y~-i~~~LG~G~fG~Vy~a~~~-~~~~vAiK~i~~~~~~~~------------~~~~~~~Ei~il~~l~HpnIv~l~~ 570 (783)
++|. +.+.||.|+||.||+|.+. .++.||||++........ ....+.+|+.+++.++||||+++++
T Consensus 8 ~ry~~~~~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~ 87 (335)
T PTZ00024 8 ERYIQKGAHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIKHENIMGLVD 87 (335)
T ss_pred cchhhhhhcccCCCceeEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCCCcceeeeeE
Confidence 4565 4577999999999999976 467899999865432210 0124678999999999999999999
Q ss_pred eeecCCceEEEEEecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEec
Q 003963 571 AVTSPQRLCIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDF 650 (783)
Q Consensus 571 ~~~~~~~~~lV~E~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DF 650 (783)
++...+..++||||+. ++|.+++.. ...+++..+..++.||+.||+|||+++ |+|+||||+||+++.++.++|+||
T Consensus 88 ~~~~~~~~~lv~e~~~-~~l~~~l~~-~~~~~~~~~~~~~~ql~~aL~~LH~~~--i~H~dl~~~nill~~~~~~kl~df 163 (335)
T PTZ00024 88 VYVEGDFINLVMDIMA-SDLKKVVDR-KIRLTESQVKCILLQILNGLNVLHKWY--FMHRDLSPANIFINSKGICKIADF 163 (335)
T ss_pred EEecCCcEEEEEeccc-cCHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCC--eecccccHHHeEECCCCCEEECCc
Confidence 9999999999999996 599999865 345899999999999999999999998 999999999999999999999999
Q ss_pred CCCcccccc--------------cccccCCCCCCcccCcccccCCC-CCchhHHHHHHHHHHHHHcCCCCCCCCChHHHH
Q 003963 651 GLSRLKHET--------------YLTTKTGKGTPQWMAPEVLRNEP-SDEKSDVYSFGVILWELATEKIPWDNLNSMQVI 715 (783)
Q Consensus 651 Gla~~~~~~--------------~~~~~~~~Gt~~Y~aPE~~~~~~-~s~~sDIwSLG~il~elltG~~Pf~~~~~~~~~ 715 (783)
|++...... ........+++.|+|||.+.+.. ++.++|||||||++|+|++|.+||...+....+
T Consensus 164 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~ 243 (335)
T PTZ00024 164 GLARRYGYPPYSDTLSKDETMQRREEMTSKVVTLWYRAPELLMGAEKYHFAVDMWSVGCIFAELLTGKPLFPGENEIDQL 243 (335)
T ss_pred cceeecccccccccccccccccccccccccccccCCCCChhcccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHH
Confidence 998755411 11112234678899999987644 689999999999999999999999877765544
Q ss_pred HHhhccccc--------------------------ccCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhh
Q 003963 716 GAVGFMNQR--------------------------LEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQ 769 (783)
Q Consensus 716 ~~i~~~~~~--------------------------~~~~~~~s~~l~~LI~~cL~~dP~~RPsa~ell~~L~~L~~~~f~ 769 (783)
..+...... .......+.++.+||.+||..+|.+||++.++ +.|+||+
T Consensus 244 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~------l~~~~~~ 317 (335)
T PTZ00024 244 GRIFELLGTPNEDNWPQAKKLPLYTEFTPRKPKDLKTIFPNASDDAIDLLQSLLKLNPLERISAKEA------LKHEYFK 317 (335)
T ss_pred HHHHHHhCCCchhhCcchhhcccccccCcCCcccHHHhCcCCChHHHHHHHHHcCCCchhccCHHHH------hcCcccC
Confidence 333211100 01123457889999999999999999999999 6799998
Q ss_pred cCcCCCCC
Q 003963 770 ASRSTVGD 777 (783)
Q Consensus 770 ~~~~~~~~ 777 (783)
.....+.+
T Consensus 318 ~~~~~~~~ 325 (335)
T PTZ00024 318 SDPLPCDP 325 (335)
T ss_pred CCCCCCCc
Confidence 76655544
No 355
>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo
Probab=100.00 E-value=1.7e-34 Score=310.57 Aligned_cols=248 Identities=26% Similarity=0.425 Sum_probs=207.4
Q ss_pred eeeeccCCcEEEEEEEEeC-CceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEeceeecCCceEEEEEecCCC
Q 003963 510 GEQIGQGSCGTVYHAVWYG-SQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIVTEFLPRG 588 (783)
Q Consensus 510 ~~~LG~G~fG~Vy~a~~~~-~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lV~E~~~gg 588 (783)
..+||+|+||.||++.... ++.||||++.... ......+.+|+.+++.++|+||+++++++...+..++||||++++
T Consensus 25 ~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~--~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~ 102 (292)
T cd06657 25 FIKIGEGSTGIVCIATVKSSGKLVAVKKMDLRK--QQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGG 102 (292)
T ss_pred HHHcCCCCCeEEEEEEEcCCCeEEEEEEecccc--hhHHHHHHHHHHHHHhcCCcchhheeeEEEeCCEEEEEEecCCCC
Confidence 4679999999999998754 5679999875432 233466888999999999999999999999999999999999999
Q ss_pred CHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCcccccccccccCCCC
Q 003963 589 SLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETYLTTKTGKG 668 (783)
Q Consensus 589 sL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~~G 668 (783)
+|.+++... .+++..++.++.|++.+|+|||+.+ ++|+||||+||+++.++.++|+|||++..............|
T Consensus 103 ~L~~~~~~~--~~~~~~~~~~~~ql~~~l~~lH~~g--ivH~dl~p~Nilv~~~~~~~l~dfg~~~~~~~~~~~~~~~~~ 178 (292)
T cd06657 103 ALTDIVTHT--RMNEEQIAAVCLAVLKALSVLHAQG--VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKSLVG 178 (292)
T ss_pred cHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCC--eecCCCCHHHEEECCCCCEEEcccccceeccccccccccccc
Confidence 999988643 4788999999999999999999998 999999999999999999999999988655433222334568
Q ss_pred CCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhcc-cccccCCCCCCHHHHHHHHHhhhhCC
Q 003963 669 TPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFM-NQRLEIPKDVDPRWAAIVESCWHSDP 747 (783)
Q Consensus 669 t~~Y~aPE~~~~~~~s~~sDIwSLG~il~elltG~~Pf~~~~~~~~~~~i~~~-~~~~~~~~~~s~~l~~LI~~cL~~dP 747 (783)
++.|++||.+.+..++.++|+||||+++|+|++|..||...........+... .........+++.+.++|.+||..+|
T Consensus 179 ~~~y~~pE~~~~~~~~~~~Dv~slGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P 258 (292)
T cd06657 179 TPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPKLKNLHKVSPSLKGFLDRLLVRDP 258 (292)
T ss_pred CccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhhCCcccCCcccCCHHHHHHHHHHHhCCc
Confidence 89999999998888899999999999999999999999877665554443221 12222345678999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHhh
Q 003963 748 QCRPSFQELVDKLRDLQRQYFQ 769 (783)
Q Consensus 748 ~~RPsa~ell~~L~~L~~~~f~ 769 (783)
.+||++.++ +.|+||.
T Consensus 259 ~~R~~~~~l------l~~~~~~ 274 (292)
T cd06657 259 AQRATAAEL------LKHPFLA 274 (292)
T ss_pred ccCcCHHHH------hcChHHh
Confidence 999999999 6688884
No 356
>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein. Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc
Probab=100.00 E-value=1.2e-34 Score=314.01 Aligned_cols=257 Identities=24% Similarity=0.363 Sum_probs=202.0
Q ss_pred eeEeeeeccCCcEEEEEEEEeCCceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEeceeecCCceEEEEEecC
Q 003963 507 LTIGEQIGQGSCGTVYHAVWYGSQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIVTEFLP 586 (783)
Q Consensus 507 y~i~~~LG~G~fG~Vy~a~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lV~E~~~ 586 (783)
|.+++.+|.|+++.||++.. .++.||||++............+.+|+.+++.++||||+++++++......+++|||++
T Consensus 4 ~~i~~~~~~~~~v~~~~~~~-~~~~~avK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~e~~~ 82 (314)
T cd08216 4 TLIGKCFEDLMIVHLAKHKP-TNTLVAVKKINLDSCSKEDLKLLQQEIITSRQLQHPNILPYVTSFIVDSELYVVSPLMA 82 (314)
T ss_pred hhhhHhhcCCceEEEEEecC-CCCEEEEEEEeccccchhHHHHHHHHHHHHHhcCCcchhhhhheeecCCeEEEEEeccC
Confidence 34455555566655555544 46789999998765556667789999999999999999999999999999999999999
Q ss_pred CCCHHHHHhhc-CCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCccccccc-----
Q 003963 587 RGSLFRLLQRN-TTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETY----- 660 (783)
Q Consensus 587 ggsL~~~L~~~-~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~----- 660 (783)
+++|.+++... ...+++..+..++.|++.||+|||+++ |+|+||||+|||++.++.++|+|||.+.......
T Consensus 83 ~~~l~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~LH~~~--ivH~dlk~~Nili~~~~~~kl~d~~~~~~~~~~~~~~~~ 160 (314)
T cd08216 83 YGSCEDLLKTHFPEGLPELAIAFILKDVLNALDYIHSKG--FIHRSVKASHILLSGDGKVVLSGLRYSVSMIKHGKRQRV 160 (314)
T ss_pred CCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCC--eecCCCCcceEEEecCCceEEecCccceeeccccccccc
Confidence 99999999753 345889999999999999999999998 9999999999999999999999999876443211
Q ss_pred --ccccCCCCCCcccCcccccCC--CCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccc--------------
Q 003963 661 --LTTKTGKGTPQWMAPEVLRNE--PSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMN-------------- 722 (783)
Q Consensus 661 --~~~~~~~Gt~~Y~aPE~~~~~--~~s~~sDIwSLG~il~elltG~~Pf~~~~~~~~~~~i~~~~-------------- 722 (783)
.......++..|+|||++.+. .++.++|||||||++|+|++|..||................
T Consensus 161 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Diws~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (314)
T cd08216 161 VHDFPKSSVKNLPWLSPEVLQQNLQGYNEKSDIYSVGITACELANGHVPFKDMPATQMLLEKVRGTVPCLLDKSTYPLYE 240 (314)
T ss_pred cccccccccccccccCHHHhcCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCccccccCchhhhc
Confidence 112234567889999998763 47889999999999999999999998765543322110000
Q ss_pred ------------------ccccCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhcCc
Q 003963 723 ------------------QRLEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQASR 772 (783)
Q Consensus 723 ------------------~~~~~~~~~s~~l~~LI~~cL~~dP~~RPsa~ell~~L~~L~~~~f~~~~ 772 (783)
.....+..++.++.+||..||..||.+|||+.++ |.|+||+..+
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~l------l~~p~~~~~~ 302 (314)
T cd08216 241 DSMSQSRSSNEHPNNRDSVDHPYTRTFSEHFHQFVELCLQRDPESRPSASQL------LNHSFFKQCK 302 (314)
T ss_pred CCcCcccccccccchhhhhhcchhhHHHHHHHHHHHHHhhcCCCcCcCHHHH------hcCchHhhhc
Confidence 0000112234678999999999999999999999 6789998765
No 357
>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4e-35 Score=299.92 Aligned_cols=263 Identities=25% Similarity=0.421 Sum_probs=223.1
Q ss_pred cccccccceeEeeeeccCCcEEEEEEEEeCC-ceEEEEEEecccCCH-HHHHHHHHHHHHHHhC-CCCceeeEeceeecC
Q 003963 499 DYEILWEDLTIGEQIGQGSCGTVYHAVWYGS-QDVAVKVFSRQEYSD-EVIHSFRQEVSLMKRL-RHPNVLLFMGAVTSP 575 (783)
Q Consensus 499 ~~e~~~~~y~i~~~LG~G~fG~Vy~a~~~~~-~~vAiK~i~~~~~~~-~~~~~~~~Ei~il~~l-~HpnIv~l~~~~~~~ 575 (783)
.+.....+|.++++||+|+|.+|..+.++.. +-||+|+++++-.++ +-......|..++.+. +||++|-++.+|+.+
T Consensus 244 ~~~l~l~df~ll~vigrgsyakvl~~~~~~t~qiyamkvvkkel~nddedidwvqtek~vfe~asn~pflvglhscfqte 323 (593)
T KOG0695|consen 244 SQGLGLQDFDLLRVIGRGSYAKVLLVRLKKTDQIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNNPFLVGLHSCFQTE 323 (593)
T ss_pred ccccccccceeeeeecCcchhhhhheehcccceeeehhhHHHHhcCCcccchhHHhhHHHHHhccCCCeEEehhhhhccc
Confidence 4455678999999999999999999998664 669999998876543 3344556677777776 599999999999999
Q ss_pred CceEEEEEecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCcc
Q 003963 576 QRLCIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRL 655 (783)
Q Consensus 576 ~~~~lV~E~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~ 655 (783)
..+++|.||++||+|--++++. .+++++.+..+..+|+.||.|||+.| ||+||||.+|||++..|++||+|+|+++.
T Consensus 324 srlffvieyv~ggdlmfhmqrq-rklpeeharfys~ei~lal~flh~rg--iiyrdlkldnvlldaeghikltdygmcke 400 (593)
T KOG0695|consen 324 SRLFFVIEYVNGGDLMFHMQRQ-RKLPEEHARFYSAEICLALNFLHERG--IIYRDLKLDNVLLDAEGHIKLTDYGMCKE 400 (593)
T ss_pred ceEEEEEEEecCcceeeehhhh-hcCcHHHhhhhhHHHHHHHHHHhhcC--eeeeeccccceEEccCCceeecccchhhc
Confidence 9999999999999998777764 46999999999999999999999999 99999999999999999999999999987
Q ss_pred cccccccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCC-------CCChHHHHHHhhcccccccCC
Q 003963 656 KHETYLTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWD-------NLNSMQVIGAVGFMNQRLEIP 728 (783)
Q Consensus 656 ~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~elltG~~Pf~-------~~~~~~~~~~i~~~~~~~~~~ 728 (783)
...+...+.+++|||.|.|||+++|..|+..+|+|+||++|+||+.|+.||. +.+...++..+. +...+.+|
T Consensus 401 ~l~~gd~tstfcgtpnyiapeilrgeeygfsvdwwalgvlmfemmagrspfdivgm~n~d~ntedylfqvi-lekqirip 479 (593)
T KOG0695|consen 401 GLGPGDTTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIVGMDNPDMNTEDYLFQVI-LEKQIRIP 479 (593)
T ss_pred CCCCCcccccccCCCcccchhhhcccccCceehHHHHHHHHHHHHcCCCCcceecCCCcccchhHHHHHHH-hhhccccc
Confidence 7777778889999999999999999999999999999999999999999995 223334443332 44567889
Q ss_pred CCCCHHHHHHHHHhhhhCCCCCC------CHHHHHHHHHHHHHHHhhcC
Q 003963 729 KDVDPRWAAIVESCWHSDPQCRP------SFQELVDKLRDLQRQYFQAS 771 (783)
Q Consensus 729 ~~~s~~l~~LI~~cL~~dP~~RP------sa~ell~~L~~L~~~~f~~~ 771 (783)
..++-....+++.-|.+||.+|. .+.++ -.|+||..+
T Consensus 480 rslsvkas~vlkgflnkdp~erlgc~~~~g~~di------k~h~ffr~i 522 (593)
T KOG0695|consen 480 RSLSVKASHVLKGFLNKDPKERLGCRPQTGFSDI------KSHAFFRSI 522 (593)
T ss_pred ceeehhhHHHHHHhhcCCcHHhcCCCcccchhhh------hcchhhhhC
Confidence 99999999999999999999984 23444 357777543
No 358
>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13
Probab=100.00 E-value=2e-34 Score=317.09 Aligned_cols=255 Identities=26% Similarity=0.371 Sum_probs=205.2
Q ss_pred ccceeEeeeeccCCcEEEEEEEEe-CCceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEeceeecCC------
Q 003963 504 WEDLTIGEQIGQGSCGTVYHAVWY-GSQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQ------ 576 (783)
Q Consensus 504 ~~~y~i~~~LG~G~fG~Vy~a~~~-~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~------ 576 (783)
..+|.+.+.||+|+||.||+|.+. .++.||||++............+.+|+.+++.++||||+++++++....
T Consensus 14 ~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 93 (342)
T cd07879 14 PERYTSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQSEIFAKRAYRELTLLKHMQHENVIGLLDVFTSAVSGDEFQ 93 (342)
T ss_pred ccceEEEEEeeecCCeEEEEEEeCCCCcEEEEEEecCccccccchhHHHHHHHHHHhcCCCCccchhheecccccCCCCc
Confidence 468999999999999999999975 4678999998765444444556788999999999999999999987543
Q ss_pred ceEEEEEecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCccc
Q 003963 577 RLCIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLK 656 (783)
Q Consensus 577 ~~~lV~E~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~ 656 (783)
.+|+||||+. .+|..++. ..+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.++|+|||++...
T Consensus 94 ~~~lv~e~~~-~~l~~~~~---~~~~~~~~~~~~~qi~~aL~~LH~~~--i~H~dlkp~NIll~~~~~~kL~dfg~~~~~ 167 (342)
T cd07879 94 DFYLVMPYMQ-TDLQKIMG---HPLSEDKVQYLVYQMLCGLKYIHSAG--IIHRDLKPGNLAVNEDCELKILDFGLARHA 167 (342)
T ss_pred eEEEEecccc-cCHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHCC--cccCCCCHHHEEECCCCCEEEeeCCCCcCC
Confidence 4699999995 47777653 35889999999999999999999998 999999999999999999999999998754
Q ss_pred ccccccccCCCCCCcccCcccccC-CCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhcccc------------
Q 003963 657 HETYLTTKTGKGTPQWMAPEVLRN-EPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQ------------ 723 (783)
Q Consensus 657 ~~~~~~~~~~~Gt~~Y~aPE~~~~-~~~s~~sDIwSLG~il~elltG~~Pf~~~~~~~~~~~i~~~~~------------ 723 (783)
... .....+++.|+|||++.+ ..++.++|||||||++|+|++|+.||...+....+..+.....
T Consensus 168 ~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (342)
T cd07879 168 DAE---MTGYVVTRWYRAPEVILNWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGPEFVQKLED 244 (342)
T ss_pred CCC---CCCceeeecccChhhhcCccccCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhcc
Confidence 332 123457889999999876 4578999999999999999999999987665443322211000
Q ss_pred ---------cc--------cCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhcCcC
Q 003963 724 ---------RL--------EIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQASRS 773 (783)
Q Consensus 724 ---------~~--------~~~~~~s~~l~~LI~~cL~~dP~~RPsa~ell~~L~~L~~~~f~~~~~ 773 (783)
.. ...+..++.+.+||.+||+.||.+||++.++ +.|+||+..+.
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~~~~e~------l~h~~f~~~~~ 305 (342)
T cd07879 245 KAAKSYIKSLPKYPRKDFSTLFPKASPQAVDLLEKMLELDVDKRLTATEA------LEHPYFDSFRD 305 (342)
T ss_pred cchHHHHhhcCCcccchHHHHhcCCCHHHHHHHHHHcCCChhhCcCHHHH------hcCcchhhccc
Confidence 00 0112467889999999999999999999999 67899877654
No 359
>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines
Probab=100.00 E-value=2.3e-34 Score=307.96 Aligned_cols=259 Identities=22% Similarity=0.346 Sum_probs=210.6
Q ss_pred ceeEeeeeccCCcEEEEEEEEe----CCceEEEEEEecccCC--HHHHHHHHHHHHHHHhC-CCCceeeEeceeecCCce
Q 003963 506 DLTIGEQIGQGSCGTVYHAVWY----GSQDVAVKVFSRQEYS--DEVIHSFRQEVSLMKRL-RHPNVLLFMGAVTSPQRL 578 (783)
Q Consensus 506 ~y~i~~~LG~G~fG~Vy~a~~~----~~~~vAiK~i~~~~~~--~~~~~~~~~Ei~il~~l-~HpnIv~l~~~~~~~~~~ 578 (783)
+|++.+.||+|+||.||++.+. .+..||||++...... ......+.+|+.++..+ +||||+++++++.....+
T Consensus 1 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~~~~~~~ 80 (288)
T cd05583 1 NFELLRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFLVTLHYAFQTDTKL 80 (288)
T ss_pred CceEEEEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCCcchhhhheeeecCCEE
Confidence 4889999999999999999864 3457999998754322 23345678899999999 599999999999999999
Q ss_pred EEEEEecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCccccc
Q 003963 579 CIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHE 658 (783)
Q Consensus 579 ~lV~E~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~~ 658 (783)
++||||+++++|.+++... ..+++..+..++.|++.+|.|||+.+ ++|+||||.||+++.++.++|+|||++.....
T Consensus 81 ~lv~e~~~~~~L~~~~~~~-~~~~~~~~~~~~~ql~~~l~~lH~~~--~~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~ 157 (288)
T cd05583 81 HLILDYVNGGELFTHLYQR-EHFTESEVRVYIAEIVLALDHLHQLG--IIYRDIKLENILLDSEGHVVLTDFGLSKEFLA 157 (288)
T ss_pred EEEEecCCCCcHHHHHhhc-CCcCHHHHHHHHHHHHHHHHHHHHCC--eeccCCCHHHeEECCCCCEEEEECcccccccc
Confidence 9999999999999998754 45889999999999999999999988 99999999999999999999999999875433
Q ss_pred ccc-cccCCCCCCcccCcccccCCC--CCchhHHHHHHHHHHHHHcCCCCCCCCCh----HHHHHHhhcccccccCCCCC
Q 003963 659 TYL-TTKTGKGTPQWMAPEVLRNEP--SDEKSDVYSFGVILWELATEKIPWDNLNS----MQVIGAVGFMNQRLEIPKDV 731 (783)
Q Consensus 659 ~~~-~~~~~~Gt~~Y~aPE~~~~~~--~s~~sDIwSLG~il~elltG~~Pf~~~~~----~~~~~~i~~~~~~~~~~~~~ 731 (783)
... ......|+..|++||.+.+.. .+.++||||||+++|+|++|..||..... ......+ .......+..+
T Consensus 158 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~--~~~~~~~~~~~ 235 (288)
T cd05583 158 EEEERAYSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLGVLTFELLTGASPFTVDGEQNSQSEISRRI--LKSKPPFPKTM 235 (288)
T ss_pred ccccccccccCCccccCHHHhcCCCCCCcchhhhHHHHHHHHHHHhCCCCcccCcccchHHHHHHHH--HccCCCCCccc
Confidence 221 122345789999999987765 68899999999999999999999964322 1221121 23345667778
Q ss_pred CHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhcCc
Q 003963 732 DPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQASR 772 (783)
Q Consensus 732 s~~l~~LI~~cL~~dP~~RPsa~ell~~L~~L~~~~f~~~~ 772 (783)
++.+.++|.+||+.||++|||+.++.+. +.++||++.-
T Consensus 236 ~~~l~~li~~~l~~~p~~R~t~~~~~~~---l~~~~~~~~~ 273 (288)
T cd05583 236 SAEARDFIQKLLEKDPKKRLGANGADEI---KNHPFFQGID 273 (288)
T ss_pred CHHHHHHHHHHhcCCHhhccCcchHHHH---hcCcccccCC
Confidence 9999999999999999999998777554 6789997753
No 360
>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]
Probab=100.00 E-value=2.5e-35 Score=308.39 Aligned_cols=257 Identities=24% Similarity=0.354 Sum_probs=208.9
Q ss_pred cccccceeEeeeeccCCcEEEEEEEEeCC-ceEEEEEEecccCCHHHHHHHHHHHHHHHhCCC--C----ceeeEeceee
Q 003963 501 EILWEDLTIGEQIGQGSCGTVYHAVWYGS-QDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRH--P----NVLLFMGAVT 573 (783)
Q Consensus 501 e~~~~~y~i~~~LG~G~fG~Vy~a~~~~~-~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~H--p----nIv~l~~~~~ 573 (783)
++..++|++...+|+|+||.|..+.+... ..||||+++... ...+..+-|+++|++|.+ | -+|++.+||.
T Consensus 85 D~l~~Ry~i~~~lGeGtFGkV~ec~D~~~~~~vAlKIik~V~---kYreAa~iEi~vLqki~~~DP~g~~rcv~m~~wFd 161 (415)
T KOG0671|consen 85 DILTNRYEIVDLLGEGTFGKVVECWDRETKEHVALKIIKNVD---KYREAALIEIEVLQKINESDPNGKFRCVQMRDWFD 161 (415)
T ss_pred cccccceehhhhhcCCcccceEEEeecCCCceehHHHHHHHH---HHhhHHHHHHHHHHHHHhcCCCCceEEEeeehhhh
Confidence 45688999999999999999999998665 679999986543 344566779999999942 2 3788899999
Q ss_pred cCCceEEEEEecCCCCHHHHHhh-cCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEc------------
Q 003963 574 SPQRLCIVTEFLPRGSLFRLLQR-NTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVD------------ 640 (783)
Q Consensus 574 ~~~~~~lV~E~~~ggsL~~~L~~-~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~------------ 640 (783)
..++.|||+|.+ |-+++++|.. +-.+++...+..+++||+++++|||+++ ++|.||||+|||+.
T Consensus 162 yrghiCivfell-G~S~~dFlk~N~y~~fpi~~ir~m~~QL~~sv~fLh~~k--l~HTDLKPENILfvss~~~~~~~~k~ 238 (415)
T KOG0671|consen 162 YRGHICIVFELL-GLSTFDFLKENNYIPFPIDHIRHMGYQLLESVAFLHDLK--LTHTDLKPENILFVSSEYFKTYNPKK 238 (415)
T ss_pred ccCceEEEEecc-ChhHHHHhccCCccccchHHHHHHHHHHHHHHHHHHhcc--eeecCCChheEEEeccceEEEeccCC
Confidence 999999999999 6799999986 4567999999999999999999999998 99999999999983
Q ss_pred --------CCCcEEEEecCCCcccccccccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChH
Q 003963 641 --------KHWTVKVGDFGLSRLKHETYLTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSM 712 (783)
Q Consensus 641 --------~~~~vkL~DFGla~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~elltG~~Pf~~~~~~ 712 (783)
.+..|+|+|||.|+...+.. .+.+.|..|+|||++.|-.++.+.||||+||||+|+++|..-|+..+..
T Consensus 239 ~~~~~r~~ks~~I~vIDFGsAtf~~e~h---s~iVsTRHYRAPEViLgLGwS~pCDvWSiGCIL~ElytG~~LFqtHen~ 315 (415)
T KOG0671|consen 239 KVCFIRPLKSTAIKVIDFGSATFDHEHH---STIVSTRHYRAPEVILGLGWSQPCDVWSIGCILVELYTGETLFQTHENL 315 (415)
T ss_pred ccceeccCCCcceEEEecCCcceeccCc---ceeeeccccCCchheeccCcCCccCceeeeeEEEEeeccceecccCCcH
Confidence 13468999999998766543 3556799999999999999999999999999999999999999876644
Q ss_pred HHHHHhhccccc-------------------ccCCC-------------------------CCCHHHHHHHHHhhhhCCC
Q 003963 713 QVIGAVGFMNQR-------------------LEIPK-------------------------DVDPRWAAIVESCWHSDPQ 748 (783)
Q Consensus 713 ~~~~~i~~~~~~-------------------~~~~~-------------------------~~s~~l~~LI~~cL~~dP~ 748 (783)
+-+..+....+. +..+. .-..+|.+||++||..||.
T Consensus 316 EHLaMMerIlGp~P~~mi~r~~~~Kyf~~~rldw~e~~~~~~~k~v~~~ckpl~~~~~~~d~e~~~LfDLl~~mL~fDP~ 395 (415)
T KOG0671|consen 316 EHLAMMERILGPIPSRMIKKTRKEKYFRRGRLDWPEVSSKGKSKYVFEPCKPLKKYMLQDDLEHVQLFDLLRRMLEFDPA 395 (415)
T ss_pred HHHHHHHHhhCCCcHHHhhhhhhHhhhhcccccCccccccccchhhhcCCccHHHHhccCcHHHhHHHHHHHHHHccCcc
Confidence 422222111110 00000 0012589999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHHhhcCc
Q 003963 749 CRPSFQELVDKLRDLQRQYFQASR 772 (783)
Q Consensus 749 ~RPsa~ell~~L~~L~~~~f~~~~ 772 (783)
+|+|+.|+ |+|+||+...
T Consensus 396 ~RiTl~EA------L~HpFF~~~~ 413 (415)
T KOG0671|consen 396 RRITLREA------LSHPFFARLT 413 (415)
T ss_pred ccccHHHH------hcCHHhhcCC
Confidence 99999999 7899998654
No 361
>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2. Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin
Probab=100.00 E-value=2.7e-34 Score=311.24 Aligned_cols=254 Identities=31% Similarity=0.448 Sum_probs=209.0
Q ss_pred ccceeEeeeeccCCcEEEEEEEEeC-CceEEEEEEecccC-CHHHHHHHHHHHHHHHhCCCCceeeEeceeecCCceEEE
Q 003963 504 WEDLTIGEQIGQGSCGTVYHAVWYG-SQDVAVKVFSRQEY-SDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIV 581 (783)
Q Consensus 504 ~~~y~i~~~LG~G~fG~Vy~a~~~~-~~~vAiK~i~~~~~-~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lV 581 (783)
...|.+.+.||+|+||.||+|.+.. +..|++|.+..... .......+.+|+.+++.++|+|++++++++......++|
T Consensus 14 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 93 (308)
T cd06634 14 EKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLV 93 (308)
T ss_pred HHHHHHHHheeeCCCEEEEEEEEcCCCcEEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCcccEEEEEEcCCeeEEE
Confidence 3457888999999999999999864 46799999875432 334456788899999999999999999999999999999
Q ss_pred EEecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCcccccccc
Q 003963 582 TEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETYL 661 (783)
Q Consensus 582 ~E~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~~ 661 (783)
|||+. ++|.+++......+++..+..++.|++.||.|||+.+ ++|+||||+|||++.++.++|+|||++......
T Consensus 94 ~e~~~-~~l~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~~--i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~-- 168 (308)
T cd06634 94 MEYCL-GSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHN--MIHRDVKAGNILLSEPGLVKLGDFGSASIMAPA-- 168 (308)
T ss_pred EEccC-CCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCC--cccCCCCHHhEEECCCCcEEECCcccceeecCc--
Confidence 99996 5888887665667899999999999999999999988 999999999999999999999999998654332
Q ss_pred cccCCCCCCcccCccccc---CCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhcccccccCCCCCCHHHHHH
Q 003963 662 TTKTGKGTPQWMAPEVLR---NEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAAI 738 (783)
Q Consensus 662 ~~~~~~Gt~~Y~aPE~~~---~~~~s~~sDIwSLG~il~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~l~~L 738 (783)
....+++.|+|||.+. ...++.++|||||||++|+|++|..||...+.......+.........+..++..+.+|
T Consensus 169 --~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 246 (308)
T cd06634 169 --NXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPALQSGHWSEYFRNF 246 (308)
T ss_pred --ccccCCccccCHHHHhhcccCCCCcccchHHHHHHHHHHHcCCCCCccccHHHHHHHHhhcCCCCcCcccccHHHHHH
Confidence 2346788999999975 34578899999999999999999999987765554444332222222344688899999
Q ss_pred HHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhc
Q 003963 739 VESCWHSDPQCRPSFQELVDKLRDLQRQYFQA 770 (783)
Q Consensus 739 I~~cL~~dP~~RPsa~ell~~L~~L~~~~f~~ 770 (783)
|.+||..+|.+||++.++ +.++|+..
T Consensus 247 i~~cl~~~P~~Rp~~~~l------l~~~~~~~ 272 (308)
T cd06634 247 VDSCLQKIPQDRPTSEVL------LKHRFVLR 272 (308)
T ss_pred HHHHhhCCcccCCCHHHH------hhCccccc
Confidence 999999999999999999 55676654
No 362
>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the
Probab=100.00 E-value=1.6e-34 Score=307.05 Aligned_cols=253 Identities=25% Similarity=0.376 Sum_probs=208.0
Q ss_pred eeEeeeeccCCcEEEEEEEEeC-CceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEeceeecCCceEEEEEec
Q 003963 507 LTIGEQIGQGSCGTVYHAVWYG-SQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIVTEFL 585 (783)
Q Consensus 507 y~i~~~LG~G~fG~Vy~a~~~~-~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lV~E~~ 585 (783)
|++.+.||+|+||.||+|.+.. ++.|++|++............+..|+.+++.++|+||+++++++...+.+++||||+
T Consensus 1 y~~~~~ig~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~~ 80 (282)
T cd07829 1 YEKLEKLGEGTYGVVYKARDKKTGEIVALKKIRLDNEEEGIPSTALREISLLKELKHPNIVKLLDVIHTERKLYLVFEYC 80 (282)
T ss_pred CeeehcccccCcceEEEeeecCCCcEEEEEEeccccccccccHHHHHHHHHHHhcCCCCHHHHHhhhhcCCceEEEecCc
Confidence 5678899999999999999865 678999998765433444566778999999999999999999999999999999999
Q ss_pred CCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCcccccccccccC
Q 003963 586 PRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETYLTTKT 665 (783)
Q Consensus 586 ~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~~~~~~ 665 (783)
+ ++|.+++......+++..++.++.|++.||+|||+.+ |+|+||+|+||+++.++.++|+|||++............
T Consensus 81 ~-~~l~~~i~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~--i~H~~l~~~ni~~~~~~~~~l~d~g~~~~~~~~~~~~~~ 157 (282)
T cd07829 81 D-MDLKKYLDKRPGPLSPNLIKSIMYQLLRGLAYCHSHR--ILHRDLKPQNILINRDGVLKLADFGLARAFGIPLRTYTH 157 (282)
T ss_pred C-cCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCC--cccCCCChheEEEcCCCCEEEecCCcccccCCCccccCc
Confidence 7 5999999876557999999999999999999999998 999999999999999999999999998765443322223
Q ss_pred CCCCCcccCcccccCC-CCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccc------------------ccc-
Q 003963 666 GKGTPQWMAPEVLRNE-PSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMN------------------QRL- 725 (783)
Q Consensus 666 ~~Gt~~Y~aPE~~~~~-~~s~~sDIwSLG~il~elltG~~Pf~~~~~~~~~~~i~~~~------------------~~~- 725 (783)
..++..|+|||.+.+. .++.++|||||||++|+|++|.+||...+....+..+.... ...
T Consensus 158 ~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (282)
T cd07829 158 EVVTLWYRAPEILLGSKHYSTAVDIWSVGCIFAEMITGKPLFPGDSEIDQLFKIFQILGTPTEESWPGVTKLPDYKPTFP 237 (282)
T ss_pred cccCcCcCChHHhcCCcCCCccccHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHHHhCCCcHHHHHhhccccccccccc
Confidence 4567889999998776 78899999999999999999999998776544433221100 000
Q ss_pred --------cCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHh
Q 003963 726 --------EIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYF 768 (783)
Q Consensus 726 --------~~~~~~s~~l~~LI~~cL~~dP~~RPsa~ell~~L~~L~~~~f 768 (783)
...+.++..+.++|.+||..+|.+||++.++ +.|+||
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~------l~~p~~ 282 (282)
T cd07829 238 KFPPKDLEKVLPRLDPEGIDLLSKMLQYNPAKRISAKEA------LKHPYF 282 (282)
T ss_pred ccCccchHHhcccccHHHHHHHHHhhccCcccCCCHHHH------hhCcCC
Confidence 1112347889999999999999999999999 667776
No 363
>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK
Probab=100.00 E-value=2.2e-34 Score=316.91 Aligned_cols=258 Identities=26% Similarity=0.360 Sum_probs=210.4
Q ss_pred cccceeEeeeeccCCcEEEEEEEEeC-CceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEeceeecCCc----
Q 003963 503 LWEDLTIGEQIGQGSCGTVYHAVWYG-SQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQR---- 577 (783)
Q Consensus 503 ~~~~y~i~~~LG~G~fG~Vy~a~~~~-~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~---- 577 (783)
..++|++.+.||.|+||.||+|.+.. ++.||||++............+.+|+.+++.++||||+++++++.....
T Consensus 13 ~~~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 92 (343)
T cd07851 13 VPDRYQNLSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPFQSAIHAKRTYRELRLLKHMDHENVIGLLDVFTPASSLEDF 92 (343)
T ss_pred ccCceEEEEEeccCCceEEEEEEECCCCcEEEEEecccccchhhHHHHHHHHHHHHHhccCCCHHHHHHHhhcccccccc
Confidence 45789999999999999999999865 5679999987654444455677889999999999999999998876554
Q ss_pred --eEEEEEecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCcc
Q 003963 578 --LCIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRL 655 (783)
Q Consensus 578 --~~lV~E~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~ 655 (783)
+++|+||+ +++|.+++.. ..+++..++.++.||+.||.|||+.+ |+|+||||+||+++.++.++|+|||++..
T Consensus 93 ~~~~lv~e~~-~~~L~~~~~~--~~l~~~~~~~~~~ql~~aL~~LH~~g--i~H~dlkp~Nill~~~~~~kL~dfg~~~~ 167 (343)
T cd07851 93 QDVYLVTHLM-GADLNNIVKC--QKLSDDHIQFLVYQILRGLKYIHSAG--IIHRDLKPSNIAVNEDCELKILDFGLARH 167 (343)
T ss_pred ccEEEEEecC-CCCHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCC--eecCCCCHHHeEECCCCCEEEcccccccc
Confidence 89999999 6799999875 35899999999999999999999998 99999999999999999999999999876
Q ss_pred cccccccccCCCCCCcccCcccccC-CCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccccc----------
Q 003963 656 KHETYLTTKTGKGTPQWMAPEVLRN-EPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQR---------- 724 (783)
Q Consensus 656 ~~~~~~~~~~~~Gt~~Y~aPE~~~~-~~~s~~sDIwSLG~il~elltG~~Pf~~~~~~~~~~~i~~~~~~---------- 724 (783)
.... .....++..|+|||.+.+ ..++.++|||||||++|+|++|+.||...+....+..+......
T Consensus 168 ~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGv~l~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 244 (343)
T cd07851 168 TDDE---MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGKTLFPGSDHIDQLKRIMNLVGTPDEELLQKIS 244 (343)
T ss_pred cccc---ccCCcccccccCHHHHhCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCHHHHhhcc
Confidence 5432 224467889999999865 46789999999999999999999999876655443332111000
Q ss_pred -------------------ccCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhcCcCC
Q 003963 725 -------------------LEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQASRST 774 (783)
Q Consensus 725 -------------------~~~~~~~s~~l~~LI~~cL~~dP~~RPsa~ell~~L~~L~~~~f~~~~~~ 774 (783)
......+++.+.+||.+||..+|.+|||+.++ +.|+||+.....
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~~l~dli~~~l~~~P~~Rpt~~el------l~h~~~~~~~~~ 307 (343)
T cd07851 245 SESARNYIQSLPQMPKKDFKEVFSGANPLAIDLLEKMLVLDPDKRITAAEA------LAHPYLAEYHDP 307 (343)
T ss_pred chhHHHHHHhccccCCCCHHHHhccCCHHHHHHHHHhCCCChhhCCCHHHH------hcCCCccccCCC
Confidence 01112468899999999999999999999999 678999655433
No 364
>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U
Probab=100.00 E-value=7.1e-34 Score=310.98 Aligned_cols=257 Identities=27% Similarity=0.381 Sum_probs=206.7
Q ss_pred cccceeEeeeeccCCcEEEEEEEEe-CCceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEeceeec-CCceEE
Q 003963 503 LWEDLTIGEQIGQGSCGTVYHAVWY-GSQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTS-PQRLCI 580 (783)
Q Consensus 503 ~~~~y~i~~~LG~G~fG~Vy~a~~~-~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~-~~~~~l 580 (783)
..++|++.+.||.|+||.||++.+. .++.||||++..........+.+.+|+.+++.++||||+++++++.. ....|+
T Consensus 8 ~~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~l 87 (328)
T cd07856 8 ITNRYVDLQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFSTPVLAKRTYRELKLLKHLRHENIISLSDIFISPLEDIYF 87 (328)
T ss_pred cccceEEEEeecccCCeEEEEEEECCCCCEEEEEEecccccccchhHHHHHHHHHHHhcCCCCeeeEeeeEecCCCcEEE
Confidence 4578999999999999999999976 45779999886544444445677889999999999999999998865 457899
Q ss_pred EEEecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCccccccc
Q 003963 581 VTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETY 660 (783)
Q Consensus 581 V~E~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~ 660 (783)
+|||+ +++|..++... +++...+..++.||+.||.|||+.+ |+|+||||.|||++.++.++|+|||++......
T Consensus 88 v~e~~-~~~L~~~~~~~--~~~~~~~~~~~~ql~~aL~~LH~~~--iiH~dl~p~Nili~~~~~~~l~dfg~~~~~~~~- 161 (328)
T cd07856 88 VTELL-GTDLHRLLTSR--PLEKQFIQYFLYQILRGLKYVHSAG--VVHRDLKPSNILINENCDLKICDFGLARIQDPQ- 161 (328)
T ss_pred Eeehh-ccCHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCC--cccCCCCHHHEeECCCCCEEeCccccccccCCC-
Confidence 99999 56899888643 4788888899999999999999998 999999999999999999999999998754322
Q ss_pred ccccCCCCCCcccCcccccC-CCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhc-------------------
Q 003963 661 LTTKTGKGTPQWMAPEVLRN-EPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGF------------------- 720 (783)
Q Consensus 661 ~~~~~~~Gt~~Y~aPE~~~~-~~~s~~sDIwSLG~il~elltG~~Pf~~~~~~~~~~~i~~------------------- 720 (783)
.....+++.|+|||.+.+ ..++.++|||||||++|+|++|.+||...........+..
T Consensus 162 --~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (328)
T cd07856 162 --MTGYVSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGKPLFPGKDHVNQFSIITDLLGTPPDDVINTICSENTL 239 (328)
T ss_pred --cCCCcccccccCceeeeccCCcCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhccchhhH
Confidence 223467889999998766 5689999999999999999999999977654332211110
Q ss_pred -----cccccc-----CCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhcCcC
Q 003963 721 -----MNQRLE-----IPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQASRS 773 (783)
Q Consensus 721 -----~~~~~~-----~~~~~s~~l~~LI~~cL~~dP~~RPsa~ell~~L~~L~~~~f~~~~~ 773 (783)
...... ....+++.+.++|.+||+.+|++||++.++ +.++||+....
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~el------l~~~~~~~~~~ 296 (328)
T cd07856 240 RFVQSLPKREPVPFSEKFKNADPSAIDLLEKMLVFDPQKRISAAEA------LAHPYLAPYHD 296 (328)
T ss_pred HHHhhccccCCCcHHHHcCCCCHHHHHHHHHHcCCChhhCCCHHHH------hcCCccccccC
Confidence 000001 113567899999999999999999999999 67888864443
No 365
>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14
Probab=100.00 E-value=7e-34 Score=313.18 Aligned_cols=255 Identities=26% Similarity=0.351 Sum_probs=205.5
Q ss_pred cccceeEeeeeccCCcEEEEEEEEe-CCceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEeceeecC------
Q 003963 503 LWEDLTIGEQIGQGSCGTVYHAVWY-GSQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSP------ 575 (783)
Q Consensus 503 ~~~~y~i~~~LG~G~fG~Vy~a~~~-~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~------ 575 (783)
..++|.+.+.||+|+||.||++.+. .++.||+|++............+.+|+.+++.++||||+++++++...
T Consensus 15 ~~~~y~~~~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~iv~~~~~~~~~~~~~~~ 94 (345)
T cd07877 15 VPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEF 94 (345)
T ss_pred ccCceEEEEEeeecCCeEEEEEEEcCCCeEEEEEEecCcchhhHHHHHHHHHHHHHHHcCCCcccceeeeeeeccccccc
Confidence 4578999999999999999999875 456799999876544444456788899999999999999999987543
Q ss_pred CceEEEEEecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCcc
Q 003963 576 QRLCIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRL 655 (783)
Q Consensus 576 ~~~~lV~E~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~ 655 (783)
...|++++++ +++|.+++... .+++..++.++.||+.||+|||+.+ |+||||||+||+++.++.++|+|||++..
T Consensus 95 ~~~~lv~~~~-~~~L~~~~~~~--~l~~~~~~~i~~qi~~aL~~LH~~~--ivH~dlkp~NIll~~~~~~kl~dfg~~~~ 169 (345)
T cd07877 95 NDVYLVTHLM-GADLNNIVKCQ--KLTDDHVQFLIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARH 169 (345)
T ss_pred ccEEEEehhc-ccCHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCC--eeecCCChHHEEEcCCCCEEEeccccccc
Confidence 3478888888 77999888643 4889999999999999999999998 99999999999999999999999999875
Q ss_pred cccccccccCCCCCCcccCcccccC-CCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhcccc-----------
Q 003963 656 KHETYLTTKTGKGTPQWMAPEVLRN-EPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQ----------- 723 (783)
Q Consensus 656 ~~~~~~~~~~~~Gt~~Y~aPE~~~~-~~~s~~sDIwSLG~il~elltG~~Pf~~~~~~~~~~~i~~~~~----------- 723 (783)
.... .....+++.|+|||.+.+ ..++.++|||||||++|+|++|..||...+....+..+.....
T Consensus 170 ~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (345)
T cd07877 170 TDDE---MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 246 (345)
T ss_pred cccc---ccccccCCCccCHHHHhCccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHhhcc
Confidence 4332 223467899999999876 5678899999999999999999999976655443322211000
Q ss_pred ----------ccc--------CCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhcC
Q 003963 724 ----------RLE--------IPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQAS 771 (783)
Q Consensus 724 ----------~~~--------~~~~~s~~l~~LI~~cL~~dP~~RPsa~ell~~L~~L~~~~f~~~ 771 (783)
... .....++++.+||.+||+.||.+||++.++ +.|+||+..
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~------l~h~~f~~~ 306 (345)
T cd07877 247 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQA------LAHAYFAQY 306 (345)
T ss_pred cHhHHHHHHHhcccCCcchhhhcCCCCHHHHHHHHHHcCCChhhcCCHHHH------hcChhhhhc
Confidence 000 112357889999999999999999999999 678999743
No 366
>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]
Probab=100.00 E-value=1.6e-35 Score=301.30 Aligned_cols=258 Identities=25% Similarity=0.382 Sum_probs=202.1
Q ss_pred cceeEeeeeccCCcEEEEEEEEeC-----CceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEeceeec-CCce
Q 003963 505 EDLTIGEQIGQGSCGTVYHAVWYG-----SQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTS-PQRL 578 (783)
Q Consensus 505 ~~y~i~~~LG~G~fG~Vy~a~~~~-----~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~-~~~~ 578 (783)
..|+++++||+|+||.||+|.... +..+|||.|+............-+|+.+++.|+||||+.+..+|-. +..+
T Consensus 24 ~~ye~ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd~tGiS~SAcREiaL~REl~h~nvi~Lv~Vfl~~d~~v 103 (438)
T KOG0666|consen 24 FEYEGIGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKDGTGISMSACREIALLRELKHPNVISLVKVFLSHDKKV 103 (438)
T ss_pred HHhhccceecccccceeeEeeeccCCcccchhhHHHHHhccCCCCCcCHHHHHHHHHHHHhcCCcchhHHHHHhccCceE
Confidence 578999999999999999996432 2369999998774333444567789999999999999999999876 7889
Q ss_pred EEEEEecCCCCHHHHHhhcC----CcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCC----CcEEEEec
Q 003963 579 CIVTEFLPRGSLFRLLQRNT----TKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKH----WTVKVGDF 650 (783)
Q Consensus 579 ~lV~E~~~ggsL~~~L~~~~----~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~----~~vkL~DF 650 (783)
++++||.+. +|+.++..++ ..++...+..|+.||+.|++|||++. |+||||||.||||..+ |.|||+||
T Consensus 104 ~l~fdYAEh-DL~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YLH~NW--vlHRDLKPaNIlvmgdgperG~VKIaDl 180 (438)
T KOG0666|consen 104 WLLFDYAEH-DLWHIIKFHRASKAKQLPRSMVKSILWQILDGVHYLHSNW--VLHRDLKPANILVMGDGPERGRVKIADL 180 (438)
T ss_pred EEEehhhhh-hHHHHHHHhccchhccCCHHHHHHHHHHHHhhhHHHhhhh--eeeccCCcceEEEeccCCccCeeEeecc
Confidence 999999977 9999986432 34888899999999999999999999 9999999999999876 99999999
Q ss_pred CCCcccccccc---cccCCCCCCcccCcccccCCC-CCchhHHHHHHHHHHHHHcCCCCCCCCCh-------H--HHHHH
Q 003963 651 GLSRLKHETYL---TTKTGKGTPQWMAPEVLRNEP-SDEKSDVYSFGVILWELATEKIPWDNLNS-------M--QVIGA 717 (783)
Q Consensus 651 Gla~~~~~~~~---~~~~~~Gt~~Y~aPE~~~~~~-~s~~sDIwSLG~il~elltG~~Pf~~~~~-------~--~~~~~ 717 (783)
|+++.+..... .....+-|..|+|||.+.|.. |+.+.|||++|||+.||+|-.+.|..... . ..+..
T Consensus 181 GlaR~~~~plkpl~s~d~VVVTiWYRAPELLLGa~hYT~AiDvWAiGCIfaElLtl~PlF~g~E~k~~~~~Pfq~dQl~r 260 (438)
T KOG0666|consen 181 GLARLFNNPLKPLASLDPVVVTIWYRAPELLLGARHYTKAIDVWAIGCIFAELLTLEPLFKGREEKIKTKNPFQHDQLDR 260 (438)
T ss_pred cHHHHhhccccccccCCceEEEEEecChHHhcccccccchhhhHHHHHHHHHHHccCccccchhhhcccCCCchHHHHHH
Confidence 99998776532 222345688999999998865 78999999999999999998887743211 1 11111
Q ss_pred hhccccc---------ccCC--------------------------CCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHH
Q 003963 718 VGFMNQR---------LEIP--------------------------KDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRD 762 (783)
Q Consensus 718 i~~~~~~---------~~~~--------------------------~~~s~~l~~LI~~cL~~dP~~RPsa~ell~~L~~ 762 (783)
|-...+. ..+| ..-++...+|+.+||+.||.+|.|+.+.
T Consensus 261 If~vLG~Pt~~~Wp~lkk~Pe~q~~ls~f~~~~~~n~sL~~~~~~~k~k~~~a~~LL~klL~yDP~kRIta~qA------ 334 (438)
T KOG0666|consen 261 IFEVLGTPTDKDWPDLKKMPEYQTLLSDFRRHYYDNVSLHKYYHKHKVKDPSALDLLQKLLTYDPIKRITAEQA------ 334 (438)
T ss_pred HHHHcCCCccccchhhhhCcchHHHHHHhHHhhcCcchHHHHHHHhcCCCchHHHHHHHHhccCchhhccHHHH------
Confidence 1000000 0011 1124457899999999999999999998
Q ss_pred HHHHHhhcC
Q 003963 763 LQRQYFQAS 771 (783)
Q Consensus 763 L~~~~f~~~ 771 (783)
|+|+||...
T Consensus 335 leh~yF~~d 343 (438)
T KOG0666|consen 335 LEHPYFTED 343 (438)
T ss_pred hcccccccC
Confidence 788999654
No 367
>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=5.8e-35 Score=297.90 Aligned_cols=255 Identities=24% Similarity=0.375 Sum_probs=209.2
Q ss_pred eeE-eeeeccCCcEEEEEEEE-eCCceEEEEEEecccCCHHHHHHHHHHHHHHHhCC-CCceeeEeceeecCCceEEEEE
Q 003963 507 LTI-GEQIGQGSCGTVYHAVW-YGSQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLR-HPNVLLFMGAVTSPQRLCIVTE 583 (783)
Q Consensus 507 y~i-~~~LG~G~fG~Vy~a~~-~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~-HpnIv~l~~~~~~~~~~~lV~E 583 (783)
|++ .+.||+|+|+.|--++. +.+.+||||++.+.. .....++.+|++++.+.+ |+||++++++|+++...|||||
T Consensus 79 YkLt~e~LGeGAyasVqtcv~i~t~~EYAVKiidKq~--gHsR~RvfREVe~f~~Cqgh~nilqLiefFEdd~~FYLVfE 156 (463)
T KOG0607|consen 79 YKLTSELLGEGAYASVQTCVSIQTGKEYAVKIIDKQP--GHSRSRVFREVETFYQCQGHKNILQLIEFFEDDTRFYLVFE 156 (463)
T ss_pred HHhHHHHhcCccceeeeeeeeeccchhhhhhhhhcCC--chHHHHHHHHHHHHHHhcCCccHHHHHHHhcccceEEEEEe
Confidence 443 46799999999999875 456789999998763 344567889999999996 9999999999999999999999
Q ss_pred ecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCC---CcEEEEecCCCccccc--
Q 003963 584 FLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKH---WTVKVGDFGLSRLKHE-- 658 (783)
Q Consensus 584 ~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~---~~vkL~DFGla~~~~~-- 658 (783)
-|.||+|..+++++ ..+++..+..+..+|+.||.|||.+| |.||||||+|||.... .-||||||.+..-...
T Consensus 157 Km~GGplLshI~~~-~~F~E~EAs~vvkdia~aLdFlH~kg--IAHRDlKPENiLC~~pn~vsPvKiCDfDLgSg~k~~~ 233 (463)
T KOG0607|consen 157 KMRGGPLLSHIQKR-KHFNEREASRVVKDIASALDFLHTKG--IAHRDLKPENILCESPNKVSPVKICDFDLGSGIKLNN 233 (463)
T ss_pred cccCchHHHHHHHh-hhccHHHHHHHHHHHHHHHHHHhhcC--cccccCCccceeecCCCCcCceeeeccccccccccCC
Confidence 99999999999874 45999999999999999999999999 9999999999999654 4589999988653221
Q ss_pred -----ccccccCCCCCCcccCccccc-----CCCCCchhHHHHHHHHHHHHHcCCCCCCCCCh---------------HH
Q 003963 659 -----TYLTTKTGKGTPQWMAPEVLR-----NEPSDEKSDVYSFGVILWELATEKIPWDNLNS---------------MQ 713 (783)
Q Consensus 659 -----~~~~~~~~~Gt~~Y~aPE~~~-----~~~~s~~sDIwSLG~il~elltG~~Pf~~~~~---------------~~ 713 (783)
......+.+|+..|||||+.. ...|+.+.|.||||+|||-||.|.+||.+.-. ..
T Consensus 234 ~~spastP~L~tPvGSAEfMAPEVVd~fv~qA~~YDKrCDlwSLGvIlYImLsGYpPFvG~Cg~dCGWdrGe~Cr~CQ~~ 313 (463)
T KOG0607|consen 234 DCSPASTPELLTPVGSAEFMAPEVVDVFVDQATFYDKRCDLWSLGVILYIMLSGYPPFVGHCGADCGWDRGEVCRVCQNK 313 (463)
T ss_pred CCCCCCCccccCcccchhhcchhHHhhhccccccccccccHHHHHHHHHHHHhCCCCccCccCCcCCccCCCccHHHHHH
Confidence 122334668999999999853 34578999999999999999999999964421 33
Q ss_pred HHHHhhcccccccCCC----CCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhcCcCC
Q 003963 714 VIGAVGFMNQRLEIPK----DVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQASRST 774 (783)
Q Consensus 714 ~~~~i~~~~~~~~~~~----~~s~~l~~LI~~cL~~dP~~RPsa~ell~~L~~L~~~~f~~~~~~ 774 (783)
+++.|+ .+.+++|. .++.+.+++|..+|.+|+.+|.++.++ ++|||++.....
T Consensus 314 LFesIQ--EGkYeFPdkdWahIS~eakdlisnLlvrda~~rlsa~~v------lnhPw~~~~~~e 370 (463)
T KOG0607|consen 314 LFESIQ--EGKYEFPDKDWAHISSEAKDLISNLLVRDAKQRLSAAQV------LNHPWVQRCAPE 370 (463)
T ss_pred HHHHHh--ccCCcCChhhhHHhhHHHHHHHHHHHhccHHhhhhhhhc------cCCccccccchh
Confidence 444553 34556664 478899999999999999999999998 788999776554
No 368
>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi
Probab=100.00 E-value=4.7e-34 Score=314.09 Aligned_cols=254 Identities=24% Similarity=0.379 Sum_probs=202.2
Q ss_pred ccceeEeeeeccCCcEEEEEEEEeC-CceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEeceeecC-------
Q 003963 504 WEDLTIGEQIGQGSCGTVYHAVWYG-SQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSP------- 575 (783)
Q Consensus 504 ~~~y~i~~~LG~G~fG~Vy~a~~~~-~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~------- 575 (783)
..+|.+.+.||.|+||.||+|.+.. ++.||+|++..... ...+.+.+|+.+++.++||||+++++++...
T Consensus 4 ~~~y~~~~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~~~--~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~ 81 (342)
T cd07854 4 GSRYMDLRPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTDP--QSVKHALREIKIIRRLDHDNIVKVYEVLGPSGSDLTED 81 (342)
T ss_pred CcceEEEEEecCCCCEEEEEEEECCCCcEEEEEEEecCCC--chHHHHHHHHHHHHhcCCCcchhhHhhhcccccccccc
Confidence 3689999999999999999999865 56899999866543 3346678899999999999999999876543
Q ss_pred -------CceEEEEEecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcC-CCcEEE
Q 003963 576 -------QRLCIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDK-HWTVKV 647 (783)
Q Consensus 576 -------~~~~lV~E~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~-~~~vkL 647 (783)
..+|+||||++ ++|.+++.. ..+++..++.++.||+.||.|||+.+ |+||||||+||+++. ++.++|
T Consensus 82 ~~~~~~~~~~~lv~e~~~-~~L~~~~~~--~~l~~~~~~~~~~qi~~aL~~LH~~g--ivH~dikp~Nili~~~~~~~kl 156 (342)
T cd07854 82 VGSLTELNSVYIVQEYME-TDLANVLEQ--GPLSEEHARLFMYQLLRGLKYIHSAN--VLHRDLKPANVFINTEDLVLKI 156 (342)
T ss_pred cccccccceEEEEeeccc-ccHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCC--cccCCCCHHHEEEcCCCceEEE
Confidence 35789999996 589888864 35889999999999999999999998 999999999999974 567899
Q ss_pred EecCCCcccccccc---cccCCCCCCcccCcccccC-CCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccc-
Q 003963 648 GDFGLSRLKHETYL---TTKTGKGTPQWMAPEVLRN-EPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMN- 722 (783)
Q Consensus 648 ~DFGla~~~~~~~~---~~~~~~Gt~~Y~aPE~~~~-~~~s~~sDIwSLG~il~elltG~~Pf~~~~~~~~~~~i~~~~- 722 (783)
+|||++........ ......++..|+|||++.+ ..++.++|||||||++|+|++|..||...+.......+....
T Consensus 157 ~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~~~~~~~~~~~ 236 (342)
T cd07854 157 GDFGLARIVDPHYSHKGYLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKPLFAGAHELEQMQLILESVP 236 (342)
T ss_pred CCcccceecCCccccccccccccccccccCHHHHhCccccCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcC
Confidence 99999875533211 1122357889999998754 557889999999999999999999998766544332211000
Q ss_pred ----------------------cc-----ccCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhc
Q 003963 723 ----------------------QR-----LEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQA 770 (783)
Q Consensus 723 ----------------------~~-----~~~~~~~s~~l~~LI~~cL~~dP~~RPsa~ell~~L~~L~~~~f~~ 770 (783)
.. ......++.++.+||.+||..||.+||++.++ +.|+||+.
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~el------l~h~~~~~ 305 (342)
T cd07854 237 VVREEDRNELLNVIPSFVRNDGGEPRRPLRDLLPGVNPEALDFLEQILTFNPMDRLTAEEA------LMHPYMSC 305 (342)
T ss_pred CCChHHhhhhhhhhhhhhhhcccccCCCHHHHccCCCHHHHHHHHHHhCCCchhccCHHHH------hCCCcccc
Confidence 00 01123578899999999999999999999999 67899974
No 369
>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]
Probab=100.00 E-value=8.8e-36 Score=297.65 Aligned_cols=257 Identities=27% Similarity=0.380 Sum_probs=204.0
Q ss_pred ccccccccceeEeeeeccCCcEEEEEEEEeC-CceEEEEEEecccCCHHHHHHHHHHHHHH-HhCCCCceeeEeceeecC
Q 003963 498 LDYEILWEDLTIGEQIGQGSCGTVYHAVWYG-SQDVAVKVFSRQEYSDEVIHSFRQEVSLM-KRLRHPNVLLFMGAVTSP 575 (783)
Q Consensus 498 ~~~e~~~~~y~i~~~LG~G~fG~Vy~a~~~~-~~~vAiK~i~~~~~~~~~~~~~~~Ei~il-~~l~HpnIv~l~~~~~~~ 575 (783)
-.++...++.+-+..||.|+||+|+|..++. ++..|||.++......+ .+++..|.+.. +.-+.||||+|||++..+
T Consensus 57 ~~~~F~~~~Lqdlg~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n~~ke-q~rll~e~d~~mks~~cp~IVkfyGa~F~E 135 (361)
T KOG1006|consen 57 HLHTFTSDNLQDLGEIGNGAFGTVNKMLHKPSGKLMAVKRIRSNNIEKE-QKRLLMEHDTVMKSSNCPNIVKFYGALFSE 135 (361)
T ss_pred cccccccchHHHHHHhcCCcchhhhhhhcCccCcEEEEEEeeeccchHH-HHHHHHHHHHHHhhcCCcHHHHHhhhhhcC
Confidence 3455556677778899999999999998865 46799999987765443 45677777754 445689999999999999
Q ss_pred CceEEEEEecCCCCHHHHHhh----cCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecC
Q 003963 576 QRLCIVTEFLPRGSLFRLLQR----NTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFG 651 (783)
Q Consensus 576 ~~~~lV~E~~~ggsL~~~L~~----~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFG 651 (783)
+..||+||+| ..+|..+... ....+++..+-+|....+.||.||... .+||||||||+|||++..|.|||||||
T Consensus 136 GdcWiCMELM-d~SlDklYk~vy~vq~~~ipE~Ilg~ItvatV~AL~yLK~~-lkiIHRDvKPSNILldr~G~vKLCDFG 213 (361)
T KOG1006|consen 136 GDCWICMELM-DISLDKLYKRVYSVQKSRIPENILGHITVATVDALDYLKEE-LKIIHRDVKPSNILLDRHGDVKLCDFG 213 (361)
T ss_pred CceeeeHHHH-hhhHHHHHHHHHHHHhccCcHhhhhheeeeehhHHHHHHHH-hhhhhccCChhheEEecCCCEeeeccc
Confidence 9999999999 4577666532 345689999999999999999999764 349999999999999999999999999
Q ss_pred CCcccccccccccCCCCCCcccCcccccC--CCCCchhHHHHHHHHHHHHHcCCCCCCCCChH-HHHHHhhcccc-cccC
Q 003963 652 LSRLKHETYLTTKTGKGTPQWMAPEVLRN--EPSDEKSDVYSFGVILWELATEKIPWDNLNSM-QVIGAVGFMNQ-RLEI 727 (783)
Q Consensus 652 la~~~~~~~~~~~~~~Gt~~Y~aPE~~~~--~~~s~~sDIwSLG~il~elltG~~Pf~~~~~~-~~~~~i~~~~~-~~~~ 727 (783)
++-....+...+ ...|...|||||.+.. ..|+.++|+||||++|||+.||..||...+.. +.+..+..... .+..
T Consensus 214 IcGqLv~SiAkT-~daGCrpYmAPERi~p~~~gyDiRSDvWSLGITL~EvAtG~fPyr~w~svfeql~~Vv~gdpp~l~~ 292 (361)
T KOG1006|consen 214 ICGQLVDSIAKT-VDAGCRPYMAPERIDPSDKGYDIRSDVWSLGITLYEVATGNFPYRKWDSVFEQLCQVVIGDPPILLF 292 (361)
T ss_pred chHhHHHHHHhh-hccCCccccChhccCCccCCcchhhhhhhhcceEeeeecCCCCcchHHHHHHHHHHHHcCCCCeecC
Confidence 987766654433 4478899999999864 34789999999999999999999999988652 33333322221 1122
Q ss_pred CC---CCCHHHHHHHHHhhhhCCCCCCCHHHHHH
Q 003963 728 PK---DVDPRWAAIVESCWHSDPQCRPSFQELVD 758 (783)
Q Consensus 728 ~~---~~s~~l~~LI~~cL~~dP~~RPsa~ell~ 758 (783)
+. .++..+..||..||.+|-..||.+.++++
T Consensus 293 ~~~~~~~s~~~~~fintCl~Kd~~~Rpky~~Lk~ 326 (361)
T KOG1006|consen 293 DKECVHYSFSMVRFINTCLIKDRSDRPKYDDLKK 326 (361)
T ss_pred cccccccCHHHHHHHHHHhhcccccCcchhhhhc
Confidence 22 37889999999999999999999999943
No 370
>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481
Probab=100.00 E-value=1.4e-33 Score=335.88 Aligned_cols=148 Identities=28% Similarity=0.450 Sum_probs=133.3
Q ss_pred ccceeEeeeeccCCcEEEEEEEEeC-CceEEEEEEecccC-CHHHHHHHHHHHHHHHhCCCCceeeEeceeecCCceEEE
Q 003963 504 WEDLTIGEQIGQGSCGTVYHAVWYG-SQDVAVKVFSRQEY-SDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIV 581 (783)
Q Consensus 504 ~~~y~i~~~LG~G~fG~Vy~a~~~~-~~~vAiK~i~~~~~-~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lV 581 (783)
.++|.+.++||+|+||.||+|.+.. ++.||||++..... .......+..|+.+++.++||||+++++++.....+|||
T Consensus 3 ~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lV 82 (669)
T cd05610 3 IEEFVIVKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDALALSKSPFIVHLYYSLQSANNVYLV 82 (669)
T ss_pred cCCEEEEEEEecCCCeEEEEEEECCCCcEEEEEEEehhhccCHHHHHHHHHHHHHHHhcCCCCcCeEEEEEEECCEEEEE
Confidence 4789999999999999999999874 57899999976543 345567788999999999999999999999999999999
Q ss_pred EEecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCc
Q 003963 582 TEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSR 654 (783)
Q Consensus 582 ~E~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~ 654 (783)
|||+.+++|.+++... ..+++..++.++.||+.||.|||.++ ||||||||+||||+.++.+||+|||+++
T Consensus 83 mEy~~g~~L~~li~~~-~~l~~~~~~~i~~qil~aL~yLH~~g--IiHrDLKP~NILl~~~g~vkL~DFGls~ 152 (669)
T cd05610 83 MEYLIGGDVKSLLHIY-GYFDEEMAVKYISEVALALDYLHRHG--IIHRDLKPDNMLISNEGHIKLTDFGLSK 152 (669)
T ss_pred EeCCCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCC--EEeCCccHHHEEEcCCCCEEEEeCCCCc
Confidence 9999999999999764 35888999999999999999999998 9999999999999999999999999875
No 371
>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co
Probab=100.00 E-value=1.1e-33 Score=309.64 Aligned_cols=256 Identities=24% Similarity=0.311 Sum_probs=201.6
Q ss_pred ceeEeeeeccCCcEEEEEEEEeC---CceEEEEEEecccCCHHHHHHHHHHHHHHHhC-CCCceeeEeceeec----CCc
Q 003963 506 DLTIGEQIGQGSCGTVYHAVWYG---SQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRL-RHPNVLLFMGAVTS----PQR 577 (783)
Q Consensus 506 ~y~i~~~LG~G~fG~Vy~a~~~~---~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l-~HpnIv~l~~~~~~----~~~ 577 (783)
+|++.+.||+|+||.||++.+.. +..||||++..........+.+.+|+.+++.+ +||||+++++++.. ...
T Consensus 1 ~y~~~~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~~~ 80 (332)
T cd07857 1 RYELIKELGQGAYGIVCSARNAETSEEETVAIKKITNVFSKKILAKRALRELKLLRHFRGHKNITCLYDMDIVFPGNFNE 80 (332)
T ss_pred CceEEEEccccCCeEEEEEEeCCCCcCceEEEEEeccccccchhHHHHHHHHHHHHHhcCCCChheeeeeeeeccccCCc
Confidence 48899999999999999999764 45799999875433333456778899999999 59999999987543 245
Q ss_pred eEEEEEecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCcccc
Q 003963 578 LCIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKH 657 (783)
Q Consensus 578 ~~lV~E~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~ 657 (783)
+|++|+|+. ++|.+++.. ...+++..++.++.||+.||.|||+++ |+||||||+|||++.++.++|+|||++....
T Consensus 81 ~~~~~e~~~-~~L~~~l~~-~~~~~~~~~~~~~~qi~~aL~~LH~~g--ivH~dlkp~Nili~~~~~~kl~Dfg~a~~~~ 156 (332)
T cd07857 81 LYLYEELME-ADLHQIIRS-GQPLTDAHFQSFIYQILCGLKYIHSAN--VLHRDLKPGNLLVNADCELKICDFGLARGFS 156 (332)
T ss_pred EEEEEeccc-CCHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHhCC--cccCCCCHHHeEEcCCCCEEeCcCCCceecc
Confidence 789999995 689998865 346899999999999999999999998 9999999999999999999999999987544
Q ss_pred cccc----cccCCCCCCcccCcccccC-CCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhcc-----------
Q 003963 658 ETYL----TTKTGKGTPQWMAPEVLRN-EPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFM----------- 721 (783)
Q Consensus 658 ~~~~----~~~~~~Gt~~Y~aPE~~~~-~~~s~~sDIwSLG~il~elltG~~Pf~~~~~~~~~~~i~~~----------- 721 (783)
.... ......|++.|+|||.+.+ ..++.++|||||||++|+|++|.+||...+....+..+...
T Consensus 157 ~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Di~slGv~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (332)
T cd07857 157 ENPGENAGFMTEYVATRWYRAPEIMLSFQSYTKAIDVWSVGCILAELLGRKPVFKGKDYVDQLNQILQVLGTPDEETLSR 236 (332)
T ss_pred cccccccccccCcccCccccCcHHHhCCCCCCcHHHHHHHHHHHHHHHhCCcCCCCCCHHHHHHHHHHHhCCCCHHHHHh
Confidence 3211 1123468999999998765 56789999999999999999999999876543322211100
Q ss_pred -------------c--c---cccCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhcC
Q 003963 722 -------------N--Q---RLEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQAS 771 (783)
Q Consensus 722 -------------~--~---~~~~~~~~s~~l~~LI~~cL~~dP~~RPsa~ell~~L~~L~~~~f~~~ 771 (783)
. . .......++..+.+||.+||+.||.+||++.++ +.++||..-
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~l------l~~~~~~~~ 298 (332)
T cd07857 237 IGSPKAQNYIRSLPNIPKKPFESIFPNANPLALDLLEKLLAFDPTKRISVEEA------LEHPYLAIW 298 (332)
T ss_pred hhhhhHHHHHHhccccCCcchHhhCCCCCHHHHHHHHHHccCCcccCCCHHHH------hcChhhhhh
Confidence 0 0 001123467899999999999999999999999 677888533
No 372
>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili
Probab=100.00 E-value=1.1e-33 Score=301.14 Aligned_cols=251 Identities=25% Similarity=0.384 Sum_probs=201.2
Q ss_pred eeEeeeeccCCcEEEEEEEEeC-CceEEEEEEecccCCHHHHHHHHHHHHHHHhCC-CCceeeEeceeecCCceEEEEEe
Q 003963 507 LTIGEQIGQGSCGTVYHAVWYG-SQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLR-HPNVLLFMGAVTSPQRLCIVTEF 584 (783)
Q Consensus 507 y~i~~~LG~G~fG~Vy~a~~~~-~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~-HpnIv~l~~~~~~~~~~~lV~E~ 584 (783)
|++.+.||.|+||.||+|.... ++.|+||.+........ .....+|+..++.++ ||||+++++++..++..++||||
T Consensus 1 y~~~~~ig~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~-~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e~ 79 (283)
T cd07830 1 YKVIKQLGDGTFGSVYLARNKETGELVAIKKMKKKFYSWE-ECMNLREVKSLRKLNEHPNIVKLKEVFRENDELYFVFEY 79 (283)
T ss_pred CeeheeeccCCceEEEEEEECCCCcEEEEEEehhhccchh-HHHHHHHHHHHHhccCCCCchhHHHHhhcCCcEEEEEec
Confidence 6788999999999999999865 56799999865543222 223456899999999 99999999999999999999999
Q ss_pred cCCCCHHHHHhhcC-CcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCcccccccccc
Q 003963 585 LPRGSLFRLLQRNT-TKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETYLTT 663 (783)
Q Consensus 585 ~~ggsL~~~L~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~~~~ 663 (783)
+ +++|.+++.... ..+++..++.++.|++.+|.|||+++ ++|+||+|+||+++.++.++|+|||++........ .
T Consensus 80 ~-~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~~--i~H~dl~~~ni~i~~~~~~~l~d~~~~~~~~~~~~-~ 155 (283)
T cd07830 80 M-EGNLYQLMKDRKGKPFSESVIRSIIYQILQGLAHIHKHG--FFHRDLKPENLLVSGPEVVKIADFGLAREIRSRPP-Y 155 (283)
T ss_pred C-CCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHHCC--cccCCCChhhEEEcCCCCEEEeecccceeccCCCC-c
Confidence 9 779999887643 46899999999999999999999998 99999999999999999999999999876543321 2
Q ss_pred cCCCCCCcccCcccccC-CCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccccc------------------
Q 003963 664 KTGKGTPQWMAPEVLRN-EPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQR------------------ 724 (783)
Q Consensus 664 ~~~~Gt~~Y~aPE~~~~-~~~s~~sDIwSLG~il~elltG~~Pf~~~~~~~~~~~i~~~~~~------------------ 724 (783)
....++..|+|||++.+ ..++.++|+||||+++|+|++|++||...........+......
T Consensus 156 ~~~~~~~~~~aPE~~~~~~~~~~~~Di~s~G~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (283)
T cd07830 156 TDYVSTRWYRAPEILLRSTSYSSPVDIWALGCIMAELYTLRPLFPGSSEIDQLYKICSVLGTPTKQDWPEGYKLASKLGF 235 (283)
T ss_pred CCCCCcccccCceeeecCcCcCCccchhhHHHHHHHHHhCCCccCCCChHHHHHHHHHhcCCCChhhhhhHhhhhccccc
Confidence 23457889999998754 45789999999999999999999999776654433222110000
Q ss_pred ----------ccCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHh
Q 003963 725 ----------LEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYF 768 (783)
Q Consensus 725 ----------~~~~~~~s~~l~~LI~~cL~~dP~~RPsa~ell~~L~~L~~~~f 768 (783)
.......+..+.+||.+||+.+|.+||++.++ +.++||
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei------~~~~~~ 283 (283)
T cd07830 236 RFPQFAPTSLHQLIPNASPEAIDLIKDMLRWDPKKRPTASQA------LQHPYF 283 (283)
T ss_pred cccccccccHHHHcccCCHHHHHHHHHhcccCcccCCCHHHH------hhCCCC
Confidence 00112236789999999999999999999999 555665
No 373
>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=9.8e-34 Score=321.36 Aligned_cols=255 Identities=31% Similarity=0.485 Sum_probs=216.0
Q ss_pred ccceeEeeeeccCCcEEEEEEEEeC-CceEEEEEEecccCCHHHHHHHHHHHHHHHhCC-CCceeeEeceeec-----CC
Q 003963 504 WEDLTIGEQIGQGSCGTVYHAVWYG-SQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLR-HPNVLLFMGAVTS-----PQ 576 (783)
Q Consensus 504 ~~~y~i~~~LG~G~fG~Vy~a~~~~-~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~-HpnIv~l~~~~~~-----~~ 576 (783)
.+-|++.+.||.|.+|.||++..+. ++..|+|++......+ .++..|.++|+.+. |||++.+|++|.. ++
T Consensus 18 ~d~~ei~evig~Gtygkv~k~k~~~~~~~aa~kI~~~~~d~d---eEiE~eynil~~~~~hpnv~~fyg~~~k~~~~~~D 94 (953)
T KOG0587|consen 18 ADIFEIIEVIGNGTYGKVYKGRHVKTGQLAAIKIMDPTEDEE---EEIELEYNMLKKYSHHPNVATFYGAFIKKDPGNGD 94 (953)
T ss_pred CCccEEEEEEeeccceeEEEEeeeecCceeeeEeecCCcccc---HHHHHHHHHHHhccCCCCcceEEEEEEEecCCCCC
Confidence 3568899999999999999999755 4678999876554322 45667888998874 9999999999853 56
Q ss_pred ceEEEEEecCCCCHHHHHhh-cCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCcc
Q 003963 577 RLCIVTEFLPRGSLFRLLQR-NTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRL 655 (783)
Q Consensus 577 ~~~lV~E~~~ggsL~~~L~~-~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~ 655 (783)
.+|||||||.||+.-++++. .+.++.+..+..|++.++.||.+||.+. ++|||||-.|||++.++.|||+|||.+..
T Consensus 95 qLWLVMEfC~gGSVTDLVKn~~g~rl~E~~IaYI~re~lrgl~HLH~nk--viHRDikG~NiLLT~e~~VKLvDFGvSaQ 172 (953)
T KOG0587|consen 95 QLWLVMEFCGGGSVTDLVKNTKGNRLKEEWIAYILREILRGLAHLHNNK--VIHRDIKGQNVLLTENAEVKLVDFGVSAQ 172 (953)
T ss_pred eEEEEeeccCCccHHHHHhhhcccchhhHHHHHHHHHHHHHHHHHhhcc--eeeecccCceEEEeccCcEEEeeeeeeee
Confidence 79999999999999999864 3567899999999999999999999988 99999999999999999999999999988
Q ss_pred cccccccccCCCCCCcccCcccccCC-----CCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccc-ccccCCC
Q 003963 656 KHETYLTTKTGKGTPQWMAPEVLRNE-----PSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMN-QRLEIPK 729 (783)
Q Consensus 656 ~~~~~~~~~~~~Gt~~Y~aPE~~~~~-----~~s~~sDIwSLG~il~elltG~~Pf~~~~~~~~~~~i~~~~-~~~~~~~ 729 (783)
....-....+.+|||.|||||++... .|+.++|+||||++-.||.-|.+|+.++.+...+..+..-. ..+.-|.
T Consensus 173 ldsT~grRnT~iGtP~WMAPEViac~e~~d~tyd~R~D~WsLGITaIEladG~PPl~DmHPmraLF~IpRNPPPkLkrp~ 252 (953)
T KOG0587|consen 173 LDSTVGRRNTFIGTPYWMAPEVIACDESPDATYDYRSDLWSLGITAIEMAEGAPPLCDMHPMRALFLIPRNPPPKLKRPK 252 (953)
T ss_pred eecccccccCcCCCcccccceeeecccCCCCCcccccchhhccceeehhcCCCCCccCcchhhhhccCCCCCCccccchh
Confidence 88777777889999999999998643 35778999999999999999999999998887665553222 1233467
Q ss_pred CCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhh
Q 003963 730 DVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQ 769 (783)
Q Consensus 730 ~~s~~l~~LI~~cL~~dP~~RPsa~ell~~L~~L~~~~f~ 769 (783)
.++.++.+||..||.+|..+||+..++ |+|+|.+
T Consensus 253 kWs~~FndFIs~cL~Kd~e~RP~~~~l------l~hpFi~ 286 (953)
T KOG0587|consen 253 KWSKKFNDFISTCLVKDYEQRPSTEEL------LKHPFIT 286 (953)
T ss_pred hHHHHHHHHHHHHHhhccccCcchhhh------ccCCccc
Confidence 788999999999999999999999999 5566543
No 374
>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]
Probab=100.00 E-value=6.1e-34 Score=288.69 Aligned_cols=250 Identities=28% Similarity=0.413 Sum_probs=205.1
Q ss_pred cccceeEe-eeeccCCcEEEEEEEEeCC-ceEEEEEEecccCCHHHHHHHHHHHHHHHhC-CCCceeeEeceeec----C
Q 003963 503 LWEDLTIG-EQIGQGSCGTVYHAVWYGS-QDVAVKVFSRQEYSDEVIHSFRQEVSLMKRL-RHPNVLLFMGAVTS----P 575 (783)
Q Consensus 503 ~~~~y~i~-~~LG~G~fG~Vy~a~~~~~-~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l-~HpnIv~l~~~~~~----~ 575 (783)
+.++|.+. ++||-|-.|.|..+.++.+ +++|+|++... ...++|+++.-.. .|||||.++++|+. .
T Consensus 59 itedY~is~qvLG~GinGkV~~C~~k~T~ekfALKvL~Ds-------~KARrEVeLHw~~s~h~~iV~IidVyeNs~~~r 131 (400)
T KOG0604|consen 59 ITEDYSISWQVLGAGINGKVVQCVHKRTQEKFALKVLLDS-------PKARREVELHWMASGHPHIVSIIDVYENSYQGR 131 (400)
T ss_pred chhhheehhhhhccccCCceEEEEeccchhhhHHHHHhcC-------HHHHhHhhhhhhhcCCCceEEeehhhhhhccCc
Confidence 45778775 5789999999999998764 67999997543 3567888876555 59999999999864 3
Q ss_pred CceEEEEEecCCCCHHHHHhhcC-CcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcC---CCcEEEEecC
Q 003963 576 QRLCIVTEFLPRGSLFRLLQRNT-TKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDK---HWTVKVGDFG 651 (783)
Q Consensus 576 ~~~~lV~E~~~ggsL~~~L~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~---~~~vkL~DFG 651 (783)
..+.+|||.|+||.|+..++.++ ..+++..+..|+.||..|+.|||+.+ |.||||||+|+|... +..+||+|||
T Consensus 132 kcLLiVmE~meGGeLfsriq~~g~~afTErea~eI~~qI~~Av~~lH~~n--IAHRDlKpENLLyt~t~~na~lKLtDfG 209 (400)
T KOG0604|consen 132 KCLLIVMECMEGGELFSRIQDRGDQAFTEREASEIMKQIGLAVRYLHSMN--IAHRDLKPENLLYTTTSPNAPLKLTDFG 209 (400)
T ss_pred eeeEeeeecccchHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHhcc--hhhccCChhheeeecCCCCcceEecccc
Confidence 45789999999999999997644 46999999999999999999999999 999999999999964 5679999999
Q ss_pred CCcccccccccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChH----HHHHHhhcccccccC
Q 003963 652 LSRLKHETYLTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSM----QVIGAVGFMNQRLEI 727 (783)
Q Consensus 652 la~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~elltG~~Pf~~~~~~----~~~~~i~~~~~~~~~ 727 (783)
+|+..... ....+.+.||.|.|||++....|+...|+||||+++|-||+|.+||...... .....|. ...+.+
T Consensus 210 FAK~t~~~-~~L~TPc~TPyYvaPevlg~eKydkscdmwSlgVimYIlLCGyPPFYS~hg~aispgMk~rI~--~gqy~F 286 (400)
T KOG0604|consen 210 FAKETQEP-GDLMTPCFTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKRRIR--TGQYEF 286 (400)
T ss_pred cccccCCC-ccccCCcccccccCHHHhCchhcCCCCCccchhHHHHHhhcCCCcccccCCccCChhHHhHhh--ccCccC
Confidence 99865543 3455778899999999999999999999999999999999999999755432 2223332 233444
Q ss_pred C----CCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhc
Q 003963 728 P----KDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQA 770 (783)
Q Consensus 728 ~----~~~s~~l~~LI~~cL~~dP~~RPsa~ell~~L~~L~~~~f~~ 770 (783)
| ..+|...+++|+.+|..+|++|.|+.++ +.|+|...
T Consensus 287 P~pEWs~VSe~aKdlIR~LLkt~PteRlTI~~~------m~hpwi~~ 327 (400)
T KOG0604|consen 287 PEPEWSCVSEAAKDLIRKLLKTEPTERLTIEEV------MDHPWINQ 327 (400)
T ss_pred CChhHhHHHHHHHHHHHHHhcCCchhheeHHHh------hcCchhcc
Confidence 4 3467889999999999999999999999 66788644
No 375
>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]
Probab=100.00 E-value=3.9e-34 Score=319.39 Aligned_cols=256 Identities=24% Similarity=0.390 Sum_probs=203.2
Q ss_pred eeEeeeeccCCcEEEEEEEEeC-CceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEeceeecCC------ceE
Q 003963 507 LTIGEQIGQGSCGTVYHAVWYG-SQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQ------RLC 579 (783)
Q Consensus 507 y~i~~~LG~G~fG~Vy~a~~~~-~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~------~~~ 579 (783)
|...+.||+|+||.||+++++. ++.||||.+..... ..-.+...+|+++|++|+|||||+++++-+... ...
T Consensus 15 W~~~e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~~-~r~~e~~~~EieilkKLnh~NIVk~f~iee~~~~~~~~~~~v 93 (732)
T KOG4250|consen 15 WEMDERLGKGAFGNVYRGRNKETGRLVAVKTFNKESS-LRPRERWCREIEILKKLNHPNIVKLFDIEETKFLGLVTRLPV 93 (732)
T ss_pred eeehhhhcCCccceeeeecccccccchhHHhhhhhcc-cchHHHHHHHHHHHHHcCchhhhhhcccCCccccCcccccce
Confidence 4556789999999999999754 57799999987553 233466788999999999999999999876544 468
Q ss_pred EEEEecCCCCHHHHHhh--cCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEc--CCC--cEEEEecCCC
Q 003963 580 IVTEFLPRGSLFRLLQR--NTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVD--KHW--TVKVGDFGLS 653 (783)
Q Consensus 580 lV~E~~~ggsL~~~L~~--~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~--~~~--~vkL~DFGla 653 (783)
+|||||.||+|+..|.+ +...+++...+.++.+++.||.|||++| ||||||||.||++- .+| ..||+|||.|
T Consensus 94 lvmEyC~gGsL~~~L~~PEN~~GLpE~e~l~lL~d~~~al~~LrEn~--IvHRDlKP~NIvl~~Gedgq~IyKLtDfG~A 171 (732)
T KOG4250|consen 94 LVMEYCSGGSLRKVLNSPENAYGLPESEFLDLLSDLVSALRHLRENG--IVHRDLKPGNIVLQIGEDGQSIYKLTDFGAA 171 (732)
T ss_pred EEEeecCCCcHHHHhcCcccccCCCHHHHHHHHHHHHHHHHHHHHcC--ceeccCCCCcEEEeecCCCceEEeeeccccc
Confidence 99999999999999975 4456999999999999999999999999 99999999999984 223 4799999999
Q ss_pred cccccccccccCCCCCCcccCccccc-CCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHH----HHHHhh---------
Q 003963 654 RLKHETYLTTKTGKGTPQWMAPEVLR-NEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQ----VIGAVG--------- 719 (783)
Q Consensus 654 ~~~~~~~~~~~~~~Gt~~Y~aPE~~~-~~~~s~~sDIwSLG~il~elltG~~Pf~~~~~~~----~~~~i~--------- 719 (783)
+-..+.. ...+.+||+.|++||++. ...|+..+|.|||||++|++.||..||....... ....+.
T Consensus 172 rel~d~s-~~~S~vGT~~YLhPel~E~q~~y~~tVDLWS~GvtlY~caTG~lPF~p~~~pk~~~~~~~~~~tkkp~~v~i 250 (732)
T KOG4250|consen 172 RELDDNS-LFTSLVGTEEYLHPELYERQKKYTATVDLWSFGVTLYECATGELPFIPFGGPKNNKEIMWHIITKKPSGVAI 250 (732)
T ss_pred ccCCCCC-eeeeecCchhhcChHHHhhccCcCceeehhhhhhHHHHHhccCCCCCcCCCccccchhhhhhhccCCCceeE
Confidence 9877665 455779999999999998 5889999999999999999999999996544332 221111
Q ss_pred ----ccc------ccccCCCCCCHHH----HHHHHHhhhhCCCCCC--CHHHHHHHHHHHHHH
Q 003963 720 ----FMN------QRLEIPKDVDPRW----AAIVESCWHSDPQCRP--SFQELVDKLRDLQRQ 766 (783)
Q Consensus 720 ----~~~------~~~~~~~~~s~~l----~~LI~~cL~~dP~~RP--sa~ell~~L~~L~~~ 766 (783)
..+ ..+++|..+++.+ ...+..+|..+|.+|. .+.+....+..+.+.
T Consensus 251 ~~~~~eNgpv~~s~~lP~p~~Ls~~l~~~~~kwLa~~L~~~~~~~~~~~~~~~Fa~~~dIL~~ 313 (732)
T KOG4250|consen 251 GAQEEENGPVEWSSTLPQPNHLSRGLATRLTKWLASMLEWNPRKRGHEGFDRFFAEVDDILNL 313 (732)
T ss_pred eeecccCCceeeeccCCCcccccHHHHhhhhHHHHHHHhhhHHHhCCCCcchHHHHHHHHHhh
Confidence 011 1233444555544 4567778899999999 888888777766543
No 376
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.5e-33 Score=312.76 Aligned_cols=243 Identities=24% Similarity=0.349 Sum_probs=204.6
Q ss_pred cccceeEeeeeccCCcEEEEEEEEeC-CceEEEEEEecccCCHHHHHHHHHHHHHHHhC-CCCceeeEeceeecCCceEE
Q 003963 503 LWEDLTIGEQIGQGSCGTVYHAVWYG-SQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRL-RHPNVLLFMGAVTSPQRLCI 580 (783)
Q Consensus 503 ~~~~y~i~~~LG~G~fG~Vy~a~~~~-~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l-~HpnIv~l~~~~~~~~~~~l 580 (783)
..+.|++...+|.|+|+.|-.+.+.. ++..++|++.+.... ..+|+.++... +||||+++.+.+.+..+.|+
T Consensus 320 ~~~~y~~~~~~~~gs~s~~~~~~~~~t~~~~~vkii~~~~~~------~~~e~~~~~~~~~h~niv~~~~v~~~~~~~~~ 393 (612)
T KOG0603|consen 320 FTESYEFREELGEGSFSAVKYCESSPTDQEPAVKIISKRADD------NQDEIPISLLVRDHPNIVKSHDVYEDGKEIYL 393 (612)
T ss_pred cchhhccccccCCCCccceeeeeccccccchhheeccccccc------cccccchhhhhcCCCcceeecceecCCceeee
Confidence 35788898999999999999998765 467999999876322 12466555544 69999999999999999999
Q ss_pred EEEecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEE-cCCCcEEEEecCCCcccccc
Q 003963 581 VTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLV-DKHWTVKVGDFGLSRLKHET 659 (783)
Q Consensus 581 V~E~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl-~~~~~vkL~DFGla~~~~~~ 659 (783)
|||++.|+-|.+.+.... .....+..|+++|+.|+.|||.+| ||||||||+|||+ +..++++|+|||.++.....
T Consensus 394 v~e~l~g~ell~ri~~~~--~~~~e~~~w~~~lv~Av~~LH~~g--vvhRDLkp~NIL~~~~~g~lrltyFG~a~~~~~~ 469 (612)
T KOG0603|consen 394 VMELLDGGELLRRIRSKP--EFCSEASQWAAELVSAVDYLHEQG--VVHRDLKPGNILLDGSAGHLRLTYFGFWSELERS 469 (612)
T ss_pred eehhccccHHHHHHHhcc--hhHHHHHHHHHHHHHHHHHHHhcC--eeecCCChhheeecCCCCcEEEEEechhhhCchh
Confidence 999999998888876544 333777789999999999999988 9999999999999 68899999999999876655
Q ss_pred cccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChH-HHHHHhhcccccccCCCCCCHHHHHH
Q 003963 660 YLTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSM-QVIGAVGFMNQRLEIPKDVDPRWAAI 738 (783)
Q Consensus 660 ~~~~~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~elltG~~Pf~~~~~~-~~~~~i~~~~~~~~~~~~~s~~l~~L 738 (783)
..+.+-|..|.|||++....++++.||||||++||+||+|+.||...... +....+ ...++...+|..+++|
T Consensus 470 ---~~tp~~t~~y~APEvl~~~~yt~acD~WSLGvlLy~ML~G~tp~~~~P~~~ei~~~i----~~~~~s~~vS~~AKdL 542 (612)
T KOG0603|consen 470 ---CDTPALTLQYVAPEVLAIQEYTEACDWWSLGVLLYEMLTGRTLFAAHPAGIEIHTRI----QMPKFSECVSDEAKDL 542 (612)
T ss_pred ---hcccchhhcccChhhhccCCCCcchhhHHHHHHHHHHHhCCCccccCCchHHHHHhh----cCCccccccCHHHHHH
Confidence 34556789999999999999999999999999999999999999877665 332222 3344458899999999
Q ss_pred HHHhhhhCCCCCCCHHHHHHHHHHHHHHHh
Q 003963 739 VESCWHSDPQCRPSFQELVDKLRDLQRQYF 768 (783)
Q Consensus 739 I~~cL~~dP~~RPsa~ell~~L~~L~~~~f 768 (783)
|.+||+.||.+||++.++ ..|+||
T Consensus 543 l~~LL~~dP~~Rl~~~~i------~~h~w~ 566 (612)
T KOG0603|consen 543 LQQLLQVDPALRLGADEI------GAHPWF 566 (612)
T ss_pred HHHhccCChhhCcChhhh------ccCcch
Confidence 999999999999999999 567887
No 377
>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.7e-34 Score=302.76 Aligned_cols=260 Identities=23% Similarity=0.377 Sum_probs=209.4
Q ss_pred ccccceeEeeeeccCCcEEEEEEEEeCC-ceEEEEEEeccc-----CCHHHHHHHHHHHHHHHhCCCCceeeEeceeec-
Q 003963 502 ILWEDLTIGEQIGQGSCGTVYHAVWYGS-QDVAVKVFSRQE-----YSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTS- 574 (783)
Q Consensus 502 ~~~~~y~i~~~LG~G~fG~Vy~a~~~~~-~~vAiK~i~~~~-----~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~- 574 (783)
.+.++|-++.+||+|+|+.||++.+... +-||+|+-.... ......+...+|.+|.+.|.||-||++|++|.-
T Consensus 460 tLn~RYLlLhLLGrGGFSEVyKAFDl~EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeLDHpRIVKlYDyfslD 539 (775)
T KOG1151|consen 460 TLNDRYLLLHLLGRGGFSEVYKAFDLTEQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKELDHPRIVKLYDYFSLD 539 (775)
T ss_pred chHHHHHHHHHhccccHHHHHHhcccchhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhccCcceeeeeeeeeeec
Confidence 3457899999999999999999998665 458888754322 123455667899999999999999999999975
Q ss_pred CCceEEEEEecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEc---CCCcEEEEecC
Q 003963 575 PQRLCIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVD---KHWTVKVGDFG 651 (783)
Q Consensus 575 ~~~~~lV~E~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~---~~~~vkL~DFG 651 (783)
.+.+|-|+|||+|.+|.-+|+.++ .+++..+..|+.||+.||.||.+...+|||-||||.|||+- ..|.+||+|||
T Consensus 540 tdsFCTVLEYceGNDLDFYLKQhk-lmSEKEARSIiMQiVnAL~YLNEikpPIIHYDLKPgNILLv~GtacGeIKITDFG 618 (775)
T KOG1151|consen 540 TDSFCTVLEYCEGNDLDFYLKQHK-LMSEKEARSIIMQIVNALKYLNEIKPPIIHYDLKPGNILLVNGTACGEIKITDFG 618 (775)
T ss_pred cccceeeeeecCCCchhHHHHhhh-hhhHHHHHHHHHHHHHHHHHHhccCCCeeeeccCCccEEEecCcccceeEeeecc
Confidence 456899999999999999998754 58999999999999999999999999999999999999994 45889999999
Q ss_pred CCccccccccc-------ccCCCCCCcccCcccccCC----CCCchhHHHHHHHHHHHHHcCCCCCCCCChH-HHHHHhh
Q 003963 652 LSRLKHETYLT-------TKTGKGTPQWMAPEVLRNE----PSDEKSDVYSFGVILWELATEKIPWDNLNSM-QVIGAVG 719 (783)
Q Consensus 652 la~~~~~~~~~-------~~~~~Gt~~Y~aPE~~~~~----~~s~~sDIwSLG~il~elltG~~Pf~~~~~~-~~~~~i~ 719 (783)
+++.+...... +..+.||..|++||++.-. ..+.++||||+|+|+|.++.|+.||...-.. +++....
T Consensus 619 LSKIMdddSy~~vdGmeLTSQgAGTYWYLPPEcFvVgkePPKIsnKVDVWSvGVIFyQClYGrKPFGhnqsQQdILqeNT 698 (775)
T KOG1151|consen 619 LSKIMDDDSYNSVDGMELTSQGAGTYWYLPPECFVVGKEPPKISNKVDVWSVGVIFYQCLYGRKPFGHNQSQQDILQENT 698 (775)
T ss_pred hhhhccCCccCcccceeeecccCceeeecCcceeecCCCCCccccceeeEeeehhhhhhhccCCCCCCchhHHHHHhhhc
Confidence 99976543222 2345799999999987532 3588999999999999999999999754333 3332221
Q ss_pred ccc---ccccCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHh
Q 003963 720 FMN---QRLEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYF 768 (783)
Q Consensus 720 ~~~---~~~~~~~~~s~~l~~LI~~cL~~dP~~RPsa~ell~~L~~L~~~~f 768 (783)
.++ -.++..+.++.+.++||++||...-+.|....+| ..++||
T Consensus 699 IlkAtEVqFP~KPvVsseAkaFIRRCLaYRKeDR~DV~qL------A~dpyl 744 (775)
T KOG1151|consen 699 ILKATEVQFPPKPVVSSEAKAFIRRCLAYRKEDRIDVQQL------ACDPYL 744 (775)
T ss_pred hhcceeccCCCCCccCHHHHHHHHHHHHhhhhhhhhHHHH------ccCccc
Confidence 111 2334446789999999999999999999998888 456776
No 378
>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]
Probab=100.00 E-value=9.3e-34 Score=330.39 Aligned_cols=247 Identities=30% Similarity=0.493 Sum_probs=191.9
Q ss_pred ccceeEeeeeccCCcEEEEEEEEe-CCceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEecee----------
Q 003963 504 WEDLTIGEQIGQGSCGTVYHAVWY-GSQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAV---------- 572 (783)
Q Consensus 504 ~~~y~i~~~LG~G~fG~Vy~a~~~-~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~---------- 572 (783)
..+|+.++.||+||||.||+++++ +++.||||++.... +......+.+|+.+|.+|+|||||+||..|
T Consensus 478 ~~DFEEL~lLGkGGFG~VvkVRNKlDGr~YAIKKIpl~~-s~~~~skI~rEVk~LArLnHpNVVRYysAWVEs~~~~~~~ 556 (1351)
T KOG1035|consen 478 LNDFEELELLGKGGFGSVVKVRNKLDGREYAIKKIPLKA-SDKLYSKILREVKLLARLNHPNVVRYYSAWVESTAELTVL 556 (1351)
T ss_pred hhhhHHHHHhcCCCCceEEEEeecccchhhhhhhccCch-HHHHHHHHHHHHHHHhhcCCcceeeeehhhhccCCccccc
Confidence 357888899999999999999975 57889999998776 667778899999999999999999998320
Q ss_pred --------------------------------------------------e------c----------------------
Q 003963 573 --------------------------------------------------T------S---------------------- 574 (783)
Q Consensus 573 --------------------------------------------------~------~---------------------- 574 (783)
. .
T Consensus 557 ei~~~~~~~~sQs~s~~~~~~~~~q~t~~p~~~~~~~~~~~~dd~sss~~~~~~~~~~~~d~e~~d~dedg~~~S~tS~~ 636 (1351)
T KOG1035|consen 557 EIVASDSESRSQSASKYNGVDIRYQPTSSPSLTLSELDSEDEDDKSSSYTTRKASYESSTDEENDDSDEDGRNLSNTSDS 636 (1351)
T ss_pred cccccchhhhcccCCCcccceeeeccCCCcccCcchhhccccCccccccccccccccccCCccccccccccccccccccc
Confidence 0 0
Q ss_pred -------------------------------CCceEEEEEecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhC
Q 003963 575 -------------------------------PQRLCIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHC 623 (783)
Q Consensus 575 -------------------------------~~~~~lV~E~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~ 623 (783)
...+||-||||+...|.+++.++...-.....|+++++|++||.|+|+.
T Consensus 637 e~~~~~d~~~ess~s~~~~~n~~e~~~~~q~~~~LYIQMEyCE~~ll~~iI~~N~~~~~~d~~wrLFreIlEGLaYIH~~ 716 (1351)
T KOG1035|consen 637 EGSVILDDTSESSESIPKTENSSEPMVPVQKPLILYIQMEYCEKTLLRDIIRRNHFNSQRDEAWRLFREILEGLAYIHDQ 716 (1351)
T ss_pred CCccccCcchhhhhhccccCCccccccccccceEEEEEHhhhhhhHHHHHHHhcccchhhHHHHHHHHHHHHHHHHHHhC
Confidence 0126899999999888888876542225778899999999999999999
Q ss_pred CCCEEecCCCCCCEEEcCCCcEEEEecCCCcccc---c---------------ccccccCCCCCCcccCcccccCCC---
Q 003963 624 NPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKH---E---------------TYLTTKTGKGTPQWMAPEVLRNEP--- 682 (783)
Q Consensus 624 ~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~---~---------------~~~~~~~~~Gt~~Y~aPE~~~~~~--- 682 (783)
| ||||||||.||+++.++.|||+|||+++... . ........+||..|+|||++.+..
T Consensus 717 g--iIHRDLKP~NIFLd~~~~VKIGDFGLAt~~~~~~~~~d~~~~~~~~~~g~~~~~~Ts~VGTalYvAPEll~~~~~~~ 794 (1351)
T KOG1035|consen 717 G--IIHRDLKPRNIFLDSRNSVKIGDFGLATDLKENLESIDQDLSFSTNRAGSNDGDLTSQVGTALYVAPELLSDTSSNK 794 (1351)
T ss_pred c--eeeccCCcceeEEcCCCCeeecccccchhhhhhhhhHhhccCccccccCCCCcccccccceeeeecHHHhccccccc
Confidence 9 9999999999999999999999999997511 0 001223457999999999998755
Q ss_pred CCchhHHHHHHHHHHHHHcCCCCCC-CCChHHHHHHhhcccccccCC----CCCCHHHHHHHHHhhhhCCCCCCCHHHHH
Q 003963 683 SDEKSDVYSFGVILWELATEKIPWD-NLNSMQVIGAVGFMNQRLEIP----KDVDPRWAAIVESCWHSDPQCRPSFQELV 757 (783)
Q Consensus 683 ~s~~sDIwSLG~il~elltG~~Pf~-~~~~~~~~~~i~~~~~~~~~~----~~~s~~l~~LI~~cL~~dP~~RPsa~ell 757 (783)
|+.|+||||||+||+||+. ||. .+.....+..+. ...++.+ ..--+.-+.+|++||+.||.+||||.++|
T Consensus 795 Yn~KiDmYSLGIVlFEM~y---PF~TsMERa~iL~~LR--~g~iP~~~~f~~~~~~~e~slI~~Ll~hdP~kRPtA~eLL 869 (1351)
T KOG1035|consen 795 YNSKIDMYSLGIVLFEMLY---PFGTSMERASILTNLR--KGSIPEPADFFDPEHPEEASLIRWLLSHDPSKRPTATELL 869 (1351)
T ss_pred ccchhhhHHHHHHHHHHhc---cCCchHHHHHHHHhcc--cCCCCCCcccccccchHHHHHHHHHhcCCCccCCCHHHHh
Confidence 8999999999999999984 453 223333333332 1122222 11224568899999999999999999996
Q ss_pred H
Q 003963 758 D 758 (783)
Q Consensus 758 ~ 758 (783)
.
T Consensus 870 ~ 870 (1351)
T KOG1035|consen 870 N 870 (1351)
T ss_pred h
Confidence 3
No 379
>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.6e-33 Score=307.61 Aligned_cols=258 Identities=19% Similarity=0.294 Sum_probs=209.1
Q ss_pred ccceeEeeeeccCCcEEEEEEEEeCC-ceEEEEEEecccC-CHHHHHHHHHHHHHHHhCCCCceeeEeceeecCCceEEE
Q 003963 504 WEDLTIGEQIGQGSCGTVYHAVWYGS-QDVAVKVFSRQEY-SDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIV 581 (783)
Q Consensus 504 ~~~y~i~~~LG~G~fG~Vy~a~~~~~-~~vAiK~i~~~~~-~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lV 581 (783)
...|..++.||-|+||.|.++...+. ..||+|.+.+... ...++...+.|-.||.....+-||+||..|++.+.+|+|
T Consensus 628 KSmFvkik~iGvGAFGeV~Lv~KvDT~~lYAmKTLrKaDVl~rnQvaHVKAERDILAEADn~WVVrLyySFQDkdnLYFV 707 (1034)
T KOG0608|consen 628 KSMFVKIKTIGVGAFGEVCLVRKVDTRALYAMKTLRKADVLMRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFV 707 (1034)
T ss_pred ccceEEEeeecccccceeEEEeecchhhHHHHhhhHHHHHHhhhhhhhhhhhhhhHhhcCCcceEEEEEEeccCCceEEE
Confidence 34688999999999999999986554 4599999877653 446677788999999999999999999999999999999
Q ss_pred EEecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCcc------
Q 003963 582 TEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRL------ 655 (783)
Q Consensus 582 ~E~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~------ 655 (783)
|+|++||++-.+|-+.+ .+++..+.+++.++..|+++.|..| +|||||||+|||||.+|+|||+|||++.-
T Consensus 708 MdYIPGGDmMSLLIrmg-IFeE~LARFYIAEltcAiesVHkmG--FIHRDiKPDNILIDrdGHIKLTDFGLCTGfRWTHd 784 (1034)
T KOG0608|consen 708 MDYIPGGDMMSLLIRMG-IFEEDLARFYIAELTCAIESVHKMG--FIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHD 784 (1034)
T ss_pred EeccCCccHHHHHHHhc-cCHHHHHHHHHHHHHHHHHHHHhcc--ceecccCccceEEccCCceeeeeccccccceeccc
Confidence 99999999999987644 5899999999999999999999999 99999999999999999999999999751
Q ss_pred ---ccccc---------------------------------ccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHH
Q 003963 656 ---KHETY---------------------------------LTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWEL 699 (783)
Q Consensus 656 ---~~~~~---------------------------------~~~~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~el 699 (783)
+.... ......+||+.|+|||++....++...|+||.|+|||||
T Consensus 785 skYYq~gdH~RqDSmep~~e~~d~~~~lkvL~~ra~~~h~r~~ahslvgt~nyiapevl~r~g~~q~cdwws~gvil~em 864 (1034)
T KOG0608|consen 785 SKYYQEGDHHRQDSMEPSPEWADISKCLKVLERRAMRQHQRILAHSLVGTPNYIAPEVLARTGYTQLCDWWSVGVILYEM 864 (1034)
T ss_pred cccccCCCccccccCCCchhhccccccchHHHHHHHhhhhhhhhhhhcCCCcccChHHhcccCccccchhhHhhHHHHHH
Confidence 11000 001123599999999999999999999999999999999
Q ss_pred HcCCCCCCCCChHHHHHHhhccccc--ccCCCCCCHHHHHHHHHhhhhCCCCCC---CHHHHHHHHHHHHHHHhhcC
Q 003963 700 ATEKIPWDNLNSMQVIGAVGFMNQR--LEIPKDVDPRWAAIVESCWHSDPQCRP---SFQELVDKLRDLQRQYFQAS 771 (783)
Q Consensus 700 ltG~~Pf~~~~~~~~~~~i~~~~~~--~~~~~~~s~~l~~LI~~cL~~dP~~RP---sa~ell~~L~~L~~~~f~~~ 771 (783)
+.|++||-...+.+....+...... +....++++++.+||.++. .+++.|. .+++| -.|+||+.|
T Consensus 865 ~~g~~pf~~~tp~~tq~kv~nw~~~l~~~~~~~ls~e~~~li~kLc-~sad~RLGkng~d~v------KaHpfFkgI 934 (1034)
T KOG0608|consen 865 LVGQPPFLADTPGETQYKVINWRNFLHIPYQGNLSKEALDLIQKLC-CSADSRLGKNGADQV------KAHPFFKGI 934 (1034)
T ss_pred hhCCCCccCCCCCcceeeeeehhhccccccccccCHHHHHHHHHHh-cChhhhhcccchhhh------hcCcccccc
Confidence 9999999877665544343322223 3344679999999998854 4456664 44445 357888665
No 380
>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins. Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha
Probab=100.00 E-value=7e-33 Score=288.51 Aligned_cols=228 Identities=19% Similarity=0.241 Sum_probs=187.6
Q ss_pred CCcEEEEEEEEeC-CceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEeceeecCCceEEEEEecCCCCHHHHH
Q 003963 516 GSCGTVYHAVWYG-SQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIVTEFLPRGSLFRLL 594 (783)
Q Consensus 516 G~fG~Vy~a~~~~-~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lV~E~~~ggsL~~~L 594 (783)
|.||.||++.+.. ++.||+|++.... .+.+|...+....||||+++++++......+++|||+++++|.+++
T Consensus 4 g~~~~v~~~~~~~~~~~~~~K~i~~~~-------~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l 76 (237)
T cd05576 4 GVIDKVLLVMDTRTQQTFILKGLRKSS-------EYSRERLTIIPHCVPNMVCLHKYIVSEDSVFLVLQHAEGGKLWSHI 76 (237)
T ss_pred cccceEEEEEEccCCcEEEEEeecchh-------hhhhHHHHHHhcCCCceeehhhheecCCeEEEEEecCCCCCHHHHH
Confidence 8999999999865 4679999986643 1233555555667999999999999999999999999999999998
Q ss_pred hhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCcccccccccccCCCCCCcccC
Q 003963 595 QRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETYLTTKTGKGTPQWMA 674 (783)
Q Consensus 595 ~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~~Gt~~Y~a 674 (783)
.... .+++..+..++.|++.||.|||+.+ |+||||||+||+++.++.++|+|||.+....... ....++..|+|
T Consensus 77 ~~~~-~l~~~~~~~~~~ql~~~l~~lH~~~--i~H~dlkp~Nil~~~~~~~~l~df~~~~~~~~~~---~~~~~~~~y~a 150 (237)
T cd05576 77 SKFL-NIPEECVKRWAAEMVVALDALHREG--IVCRDLNPNNILLDDRGHIQLTYFSRWSEVEDSC---DGEAVENMYCA 150 (237)
T ss_pred HHhc-CCCHHHHHHHHHHHHHHHHHHHhCC--eeccCCCHHHEEEcCCCCEEEecccchhcccccc---ccCCcCccccC
Confidence 7643 5899999999999999999999998 9999999999999999999999999876544321 23345778999
Q ss_pred cccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhcccccccCCCCCCHHHHHHHHHhhhhCCCCCCCH-
Q 003963 675 PEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAAIVESCWHSDPQCRPSF- 753 (783)
Q Consensus 675 PE~~~~~~~s~~sDIwSLG~il~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~l~~LI~~cL~~dP~~RPsa- 753 (783)
||.+.+..++.++|+|||||++|+|++|..||...... + .......+|..+++.+.+||.+||+.||.+||++
T Consensus 151 PE~~~~~~~~~~~DvwslG~il~el~~g~~~~~~~~~~-----~-~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~~~~ 224 (237)
T cd05576 151 PEVGGISEETEACDWWSLGAILFELLTGKTLVECHPSG-----I-NTHTTLNIPEWVSEEARSLLQQLLQFNPTERLGAG 224 (237)
T ss_pred CcccCCCCCCchhhHHHHHHHHHHHHHCcchhhcCchh-----c-ccccccCCcccCCHHHHHHHHHHccCCHHHhcCCC
Confidence 99998888899999999999999999999887643221 0 0112345677789999999999999999999986
Q ss_pred ----HHHHHHHHHHHHHHh
Q 003963 754 ----QELVDKLRDLQRQYF 768 (783)
Q Consensus 754 ----~ell~~L~~L~~~~f 768 (783)
.++ +.|+||
T Consensus 225 ~~~~~~~------~~h~~~ 237 (237)
T cd05576 225 VAGVEDI------KSHPFF 237 (237)
T ss_pred ccchHHH------HcCCCC
Confidence 555 567765
No 381
>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=3.2e-32 Score=319.79 Aligned_cols=263 Identities=32% Similarity=0.614 Sum_probs=226.0
Q ss_pred cccccccceeEeeeeccCCcEEEEEEEEeC--------CceEEEEEEecccCCHHHHHHHHHHHHHHHhCC-CCceeeEe
Q 003963 499 DYEILWEDLTIGEQIGQGSCGTVYHAVWYG--------SQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLR-HPNVLLFM 569 (783)
Q Consensus 499 ~~e~~~~~y~i~~~LG~G~fG~Vy~a~~~~--------~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~-HpnIv~l~ 569 (783)
.||+..++..+.+.||+|.||.|++|..++ ...||||.++..... ...+.+..|+.+|+.+. |+||+.++
T Consensus 290 ~~e~~~~~l~~~~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~-~~~~~~~~El~~m~~~g~H~niv~ll 368 (609)
T KOG0200|consen 290 KWEIPRENLKLGKYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENASS-SEKKDLMSELNVLKELGKHPNIVNLL 368 (609)
T ss_pred ceeechhhccccceeecccccceEeEEEeecccccccceEEEEEEecccccCc-HHHHHHHHHHHHHHHhcCCcchhhhe
Confidence 678888888999999999999999997531 235899998776655 66788999999999995 99999999
Q ss_pred ceeecCCceEEEEEecCCCCHHHHHhhcC---------------CcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCC
Q 003963 570 GAVTSPQRLCIVTEFLPRGSLFRLLQRNT---------------TKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKS 634 (783)
Q Consensus 570 ~~~~~~~~~~lV~E~~~ggsL~~~L~~~~---------------~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp 634 (783)
+++...+.+++|+||+..|+|..+|+.++ ..++....+.++.||+.||+||++.. +|||||-.
T Consensus 369 G~~t~~~~~~~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L~~~~--~vHRDLAa 446 (609)
T KOG0200|consen 369 GACTQDGPLYVIVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEYLASVP--CVHRDLAA 446 (609)
T ss_pred eeeccCCceEEEEEeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHHHhhCC--ccchhhhh
Confidence 99999999999999999999999998766 34888999999999999999999988 99999999
Q ss_pred CCEEEcCCCcEEEEecCCCcccccc-cccccCCCC--CCcccCcccccCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCC
Q 003963 635 SNLLVDKHWTVKVGDFGLSRLKHET-YLTTKTGKG--TPQWMAPEVLRNEPSDEKSDVYSFGVILWELAT-EKIPWDNLN 710 (783)
Q Consensus 635 ~NILl~~~~~vkL~DFGla~~~~~~-~~~~~~~~G--t~~Y~aPE~~~~~~~s~~sDIwSLG~il~ellt-G~~Pf~~~~ 710 (783)
+||||+.+..+||+|||+++..... +.......| ...|||||.+....++.++||||+|++||||++ |..||.+..
T Consensus 447 RNVLi~~~~~~kIaDFGlar~~~~~~~y~~~~~~~~LP~kWmApEsl~~~~ft~kSDVWSfGI~L~EifsLG~~PYp~~~ 526 (609)
T KOG0200|consen 447 RNVLITKNKVIKIADFGLARDHYNKDYYRTKSSAGTLPVKWMAPESLFDRVFTSKSDVWSFGILLWEIFTLGGTPYPGIP 526 (609)
T ss_pred hhEEecCCCEEEEccccceeccCCCCceEecCCCCccceeecCHHHhccCcccccchhhHHHHHHHHHhhCCCCCCCCCC
Confidence 9999999999999999999854432 222122222 456999999999999999999999999999999 899999866
Q ss_pred -hHHHHHHhhcccccccCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHH
Q 003963 711 -SMQVIGAVGFMNQRLEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQR 765 (783)
Q Consensus 711 -~~~~~~~i~~~~~~~~~~~~~s~~l~~LI~~cL~~dP~~RPsa~ell~~L~~L~~ 765 (783)
...+.. ......+...|..+++++.++++.||+.+|++||++.++.+.|+.+..
T Consensus 527 ~~~~l~~-~l~~G~r~~~P~~c~~eiY~iM~~CW~~~p~~RP~F~~~~~~~~~~l~ 581 (609)
T KOG0200|consen 527 PTEELLE-FLKEGNRMEQPEHCSDEIYDLMKSCWNADPEDRPTFSECVEFFEKHLQ 581 (609)
T ss_pred cHHHHHH-HHhcCCCCCCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHHHHHHHH
Confidence 444443 334566888999999999999999999999999999999999998644
No 382
>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.5e-34 Score=286.61 Aligned_cols=262 Identities=21% Similarity=0.294 Sum_probs=207.7
Q ss_pred ccccceeEeeeeccCCcEEEEEEEEeC-CceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEeceeec------
Q 003963 502 ILWEDLTIGEQIGQGSCGTVYHAVWYG-SQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTS------ 574 (783)
Q Consensus 502 ~~~~~y~i~~~LG~G~fG~Vy~a~~~~-~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~------ 574 (783)
.....|+-..+||+|.||.||+|+.+. ++.||+|++-.+......-....+|+.+|..|+|+|++.++++|..
T Consensus 14 ~~~~~yek~~kigqGtfgeVFkAr~~n~~kkvalkkvlmeneKeGfpitalreikiL~~lkHenv~nliEic~tk~Tp~~ 93 (376)
T KOG0669|consen 14 DEVSKYEKLAKIGQGTFGEVFKARSKNTGKKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPTN 93 (376)
T ss_pred ecchHHHHHHhcCCchHHHHHHHhhcCccchhHHHHHHHhccccCCcHHHHHHHHHHHHhcchhHHHHHHHHhhccCCcc
Confidence 344677888899999999999999765 4568888764433222233456689999999999999999998843
Q ss_pred --CCceEEEEEecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCC
Q 003963 575 --PQRLCIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGL 652 (783)
Q Consensus 575 --~~~~~lV~E~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGl 652 (783)
...+|+||.+|+. +|..+|.....+++...+..++.+++.||.|+|+.. |+|||+||+|+||+.+|.+||+|||+
T Consensus 94 r~r~t~ylVf~~ceh-DLaGlLsn~~vr~sls~Ikk~Mk~Lm~GL~~iHr~k--ilHRDmKaaNvLIt~dgilklADFGl 170 (376)
T KOG0669|consen 94 RDRATFYLVFDFCEH-DLAGLLSNRKVRFSLSEIKKVMKGLMNGLYYIHRNK--ILHRDMKAANVLITKDGILKLADFGL 170 (376)
T ss_pred cccceeeeeHHHhhh-hHHHHhcCccccccHHHHHHHHHHHHHHHHHHHHhh--HHhhcccHhhEEEcCCceEEeecccc
Confidence 2348999999976 999999887788999999999999999999999998 99999999999999999999999999
Q ss_pred Cccccccc----ccccCCCCCCcccCcccccCCC-CCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccccc--c
Q 003963 653 SRLKHETY----LTTKTGKGTPQWMAPEVLRNEP-SDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQR--L 725 (783)
Q Consensus 653 a~~~~~~~----~~~~~~~Gt~~Y~aPE~~~~~~-~s~~sDIwSLG~il~elltG~~Pf~~~~~~~~~~~i~~~~~~--~ 725 (783)
++.+.... ......+-|..|++||.+.|.. ++.+.|||+.||++.||+++.+.+++....+.+..|..+-+. .
T Consensus 171 ar~fs~~~n~~kprytnrvvTLwYrppEllLG~r~yg~~iDiWgAgCimaeMwtrspimqgnteqqql~~Is~LcGs~tk 250 (376)
T KOG0669|consen 171 ARAFSTSKNVVKPRYTNRVVTLWYRPPELLLGDREYGPPIDIWGAGCIMAEMWTRSPIMQGNTEQQQLHLISQLCGSITK 250 (376)
T ss_pred ccceecccccCCCCcccceeeeecCCHHHhhcccccCCcchhHhHHHHHHHHHccCccccCChHHHHHHHHHHHhccCCc
Confidence 97544321 1122345689999999988754 799999999999999999999999988877766554322110 0
Q ss_pred c------------------CC-------------CCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhcCc
Q 003963 726 E------------------IP-------------KDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQASR 772 (783)
Q Consensus 726 ~------------------~~-------------~~~s~~l~~LI~~cL~~dP~~RPsa~ell~~L~~L~~~~f~~~~ 772 (783)
+ ++ -.-+++..+|+.++|..||.+|++++++ +.|.||..-.
T Consensus 251 evWP~~d~lpL~~sie~ePl~~~~~rkv~n~~kp~~kd~~a~dLle~ll~~DP~kR~~ad~a------lnh~~F~kdp 322 (376)
T KOG0669|consen 251 EVWPNVDNLPLYQSIELEPLPKGQKRKVKNRLKPYVKDDEALDLLEKLLKLDPTKRIDADQA------LNHDFFWKDP 322 (376)
T ss_pred ccCCCcccchHHHhccCCCCCcchhhhhhhhcccccCChhHHHHHHHHhccCcccCcchHhh------hchhhhhcCC
Confidence 0 11 0124477899999999999999999999 5677875433
No 383
>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain. Phosphotransferases. Serine or threonine-specific kinase subfamily.
Probab=99.98 E-value=3.2e-31 Score=273.17 Aligned_cols=237 Identities=32% Similarity=0.494 Sum_probs=197.3
Q ss_pred CcEEEEEEEEeC-CceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEeceeecCCceEEEEEecCCCCHHHHHh
Q 003963 517 SCGTVYHAVWYG-SQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIVTEFLPRGSLFRLLQ 595 (783)
Q Consensus 517 ~fG~Vy~a~~~~-~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lV~E~~~ggsL~~~L~ 595 (783)
+||.||++.+.. ++.+++|++........ ...+.+|++.++.++|+||+++++++......+++|||+++++|..++.
T Consensus 1 ~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~-~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~~~L~~~~~ 79 (244)
T smart00220 1 SFGKVYLARDKKTGKLVAIKVIKKEKIKKK-RERILREISILKKLKHPNIVRLYDVFEDEDKLYLVMEYCDGGDLFDLLK 79 (244)
T ss_pred CceEEEEEEECCCCcEEEEEEecccccccH-HHHHHHHHHHHHhCCCCcHHHHHhheeeCCEEEEEEeCCCCCCHHHHHH
Confidence 589999999875 67899999876544322 5688899999999999999999999999899999999999999999997
Q ss_pred hcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCcccccccccccCCCCCCcccCc
Q 003963 596 RNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETYLTTKTGKGTPQWMAP 675 (783)
Q Consensus 596 ~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~~Gt~~Y~aP 675 (783)
.... ++...++.++.+++.+|.|||+.+ |+|+||+|.||+++.++.++|+|||.+....... ......++..|++|
T Consensus 80 ~~~~-~~~~~~~~~~~~l~~~l~~lh~~~--i~h~~i~~~ni~~~~~~~~~l~d~~~~~~~~~~~-~~~~~~~~~~~~~p 155 (244)
T smart00220 80 KRGR-LSEDEARFYARQILSALEYLHSNG--IIHRDLKPENILLDEDGHVKLADFGLARQLDPGG-LLTTFVGTPEYMAP 155 (244)
T ss_pred hccC-CCHHHHHHHHHHHHHHHHHHHHcC--eecCCcCHHHeEECCCCcEEEccccceeeecccc-ccccccCCcCCCCH
Confidence 6443 888999999999999999999998 9999999999999999999999999987665432 22345678899999
Q ss_pred ccccCCCCCchhHHHHHHHHHHHHHcCCCCCCC-CChHHHHHHhhcccccccCCCC-CCHHHHHHHHHhhhhCCCCCCCH
Q 003963 676 EVLRNEPSDEKSDVYSFGVILWELATEKIPWDN-LNSMQVIGAVGFMNQRLEIPKD-VDPRWAAIVESCWHSDPQCRPSF 753 (783)
Q Consensus 676 E~~~~~~~s~~sDIwSLG~il~elltG~~Pf~~-~~~~~~~~~i~~~~~~~~~~~~-~s~~l~~LI~~cL~~dP~~RPsa 753 (783)
|.+.+..++.++|||+||+++|+|++|..||.. .........+............ ++.++.+++.+||..+|.+||++
T Consensus 156 E~~~~~~~~~~~Di~slG~~l~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~ 235 (244)
T smart00220 156 EVLLGKGYGKAVDVWSLGVILYELLTGKPPFPGDDQLLELFKKIGKPKPPFPPPEWKISPEAKDLIRKLLVKDPEKRLTA 235 (244)
T ss_pred HHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhccCCCCccccccCCHHHHHHHHHHccCCchhccCH
Confidence 999988889999999999999999999999987 4444443333222111111111 88999999999999999999999
Q ss_pred HHHHH
Q 003963 754 QELVD 758 (783)
Q Consensus 754 ~ell~ 758 (783)
.++++
T Consensus 236 ~~~~~ 240 (244)
T smart00220 236 EEALQ 240 (244)
T ss_pred HHHhh
Confidence 99953
No 384
>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]
Probab=99.98 E-value=4.4e-32 Score=304.11 Aligned_cols=254 Identities=30% Similarity=0.540 Sum_probs=220.5
Q ss_pred eeEeeeeccCCcEEEEEEEEeCC-----ceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEeceeecCCceEEE
Q 003963 507 LTIGEQIGQGSCGTVYHAVWYGS-----QDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIV 581 (783)
Q Consensus 507 y~i~~~LG~G~fG~Vy~a~~~~~-----~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lV 581 (783)
.+..++||+|+||+||+|.+... -+||||++...... +...++..|+-+|..|+|||++++++++.... +.||
T Consensus 698 lkk~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~t~~-~~s~e~LdeAl~masldHpnl~RLLgvc~~s~-~qlv 775 (1177)
T KOG1025|consen 698 LKKDKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEFTSP-KASIELLDEALRMASLDHPNLLRLLGVCMLST-LQLV 775 (1177)
T ss_pred hhhhceeccccceeEEeeeEecCCceecceeEEEEeeccCCc-hhhHHHHHHHHHHhcCCCchHHHHhhhcccch-HHHH
Confidence 44568899999999999987542 25999998765533 33467889999999999999999999998765 8899
Q ss_pred EEecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCcccccccc
Q 003963 582 TEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETYL 661 (783)
Q Consensus 582 ~E~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~~ 661 (783)
++|+++|.|.++++.++..+-.+..+.|..||++||.|||.++ +|||||-.+||||..-.+|||.|||+++.......
T Consensus 776 tq~mP~G~LlDyvr~hr~~igsq~lLnw~~QIAkgM~YLe~qr--lVHrdLaaRNVLVksP~hvkitdfgla~ll~~d~~ 853 (1177)
T KOG1025|consen 776 TQLMPLGCLLDYVREHRDNIGSQDLLNWCYQIAKGMKYLEEQR--LVHRDLAARNVLVKSPNHVKITDFGLAKLLAPDEK 853 (1177)
T ss_pred HHhcccchHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHhcc--hhhhhhhhhheeecCCCeEEEEecchhhccCcccc
Confidence 9999999999999999999999999999999999999999988 99999999999999999999999999987654432
Q ss_pred cc--cCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCChHHHHHHhhcccccccCCCCCCHHHHHH
Q 003963 662 TT--KTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELAT-EKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAAI 738 (783)
Q Consensus 662 ~~--~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~l~~L 738 (783)
.. ....-.+.|||-|.+....++.++||||+||++||+|| |..||.+....++-..+. ...++..|+.++.++..+
T Consensus 854 ey~~~~gK~pikwmale~i~~~~~thqSDVWsfGVtiWElmTFGa~Py~gi~~~eI~dlle-~geRLsqPpiCtiDVy~~ 932 (1177)
T KOG1025|consen 854 EYSAPGGKVPIKWMALESIRIRKYTHQSDVWSFGVTIWELMTFGAKPYDGIPAEEIPDLLE-KGERLSQPPICTIDVYMV 932 (1177)
T ss_pred cccccccccCcHHHHHHHhhccCCCchhhhhhhhhhHHHHHhcCCCccCCCCHHHhhHHHh-ccccCCCCCCccHHHHHH
Confidence 22 22334678999999999999999999999999999998 999999998877765554 445688899999999999
Q ss_pred HHHhhhhCCCCCCCHHHHHHHHHHHHH
Q 003963 739 VESCWHSDPQCRPSFQELVDKLRDLQR 765 (783)
Q Consensus 739 I~~cL~~dP~~RPsa~ell~~L~~L~~ 765 (783)
+.+||..|+..||+++++...+.++..
T Consensus 933 mvkCwmid~~~rp~fkel~~~fs~~ar 959 (1177)
T KOG1025|consen 933 MVKCWMIDADSRPTFKELAEEFSRMAR 959 (1177)
T ss_pred HHHHhccCcccCccHHHHHHHHHHHhc
Confidence 999999999999999999988877643
No 385
>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]
Probab=99.97 E-value=2.2e-32 Score=293.66 Aligned_cols=256 Identities=23% Similarity=0.347 Sum_probs=209.3
Q ss_pred cccccceeEeeeeccCCcEEEEEEEEeC-CceEEEEEEecccCCHHHHHHHHHHHHHHHhCCC------CceeeEeceee
Q 003963 501 EILWEDLTIGEQIGQGSCGTVYHAVWYG-SQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRH------PNVLLFMGAVT 573 (783)
Q Consensus 501 e~~~~~y~i~~~LG~G~fG~Vy~a~~~~-~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~H------pnIv~l~~~~~ 573 (783)
|.+-.+|.+....|+|-|+.|..|.+.. ++.||||++...... .+.=..|++||+.|+. -++++|+-.|.
T Consensus 428 E~LD~RY~V~~~~GkGvFs~Vvra~D~~r~~~vAiKIIRnNE~M---~KtGl~EleiLkKL~~AD~Edk~Hclrl~r~F~ 504 (752)
T KOG0670|consen 428 ELLDSRYEVQGYTGKGVFSTVVRARDQARGQEVAIKIIRNNEVM---HKTGLKELEILKKLNDADPEDKFHCLRLFRHFK 504 (752)
T ss_pred hhhcceeEEEeccccceeeeeeeccccCCCCeeEEEEeecchHH---hhhhhHHHHHHHHhhccCchhhhHHHHHHHHhh
Confidence 4566799999999999999999999854 468999999765432 2344679999999952 47899999999
Q ss_pred cCCceEEEEEecCCCCHHHHHhhcC--CcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCC-CcEEEEec
Q 003963 574 SPQRLCIVTEFLPRGSLFRLLQRNT--TKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKH-WTVKVGDF 650 (783)
Q Consensus 574 ~~~~~~lV~E~~~ggsL~~~L~~~~--~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~-~~vkL~DF 650 (783)
..+++|||||-+ ..+|.++|++.+ ..|....+..++.||+.||..|-.+| |+|.||||+||||++. ..+|||||
T Consensus 505 hknHLClVFE~L-slNLRevLKKyG~nvGL~ikaVRsYaqQLflALklLK~c~--vlHaDIKPDNiLVNE~k~iLKLCDf 581 (752)
T KOG0670|consen 505 HKNHLCLVFEPL-SLNLREVLKKYGRNVGLHIKAVRSYAQQLFLALKLLKKCG--VLHADIKPDNILVNESKNILKLCDF 581 (752)
T ss_pred hcceeEEEehhh-hchHHHHHHHhCcccceeehHHHHHHHHHHHHHHHHHhcC--eeecccCccceEeccCcceeeeccC
Confidence 999999999999 679999998643 44778899999999999999999999 9999999999999875 56899999
Q ss_pred CCCcccccccccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccccccc----
Q 003963 651 GLSRLKHETYLTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLE---- 726 (783)
Q Consensus 651 Gla~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~elltG~~Pf~~~~~~~~~~~i~~~~~~~~---- 726 (783)
|.|....+...+.. .-+..|+|||++.|.+|++..|+||+||+||||+||+.-|.+....+++.....+.+.++
T Consensus 582 GSA~~~~eneitPY--LVSRFYRaPEIiLG~~yd~~iD~WSvgctLYElYtGkIlFpG~TNN~MLrl~me~KGk~p~Kml 659 (752)
T KOG0670|consen 582 GSASFASENEITPY--LVSRFYRAPEIILGLPYDYPIDTWSVGCTLYELYTGKILFPGRTNNQMLRLFMELKGKFPNKML 659 (752)
T ss_pred ccccccccccccHH--HHHHhccCcceeecCcccCCccceeeceeeEEeeccceecCCCCcHHHHHHHHHhcCCCcHHHh
Confidence 99987766544332 236789999999999999999999999999999999999998887776654322211110
Q ss_pred --------------------------------C----C-----------CCCC-------HHHHHHHHHhhhhCCCCCCC
Q 003963 727 --------------------------------I----P-----------KDVD-------PRWAAIVESCWHSDPQCRPS 752 (783)
Q Consensus 727 --------------------------------~----~-----------~~~s-------~~l~~LI~~cL~~dP~~RPs 752 (783)
+ | ..++ ..|.+||.+||..||.+|.|
T Consensus 660 RKgqF~dqHFD~d~nf~~~e~D~vT~r~~~~vm~~vkPtkdl~s~l~~~q~~~deq~~~~~~~rdLLdkml~LdP~KRit 739 (752)
T KOG0670|consen 660 RKGQFKDQHFDQDLNFLYIEVDKVTEREKRTVMVNVKPTKDLGSELIAVQRLPDEQPKIVQQLRDLLDKMLILDPEKRIT 739 (752)
T ss_pred hhcchhhhhcccccceEEEeccccccceeEEEecccCcchhHHHHHhccCCCCchhHHHHHHHHHHHHHHhccChhhcCC
Confidence 0 0 0111 25789999999999999999
Q ss_pred HHHHHHHHHHHHHHHhhc
Q 003963 753 FQELVDKLRDLQRQYFQA 770 (783)
Q Consensus 753 a~ell~~L~~L~~~~f~~ 770 (783)
..+. |.|+||+.
T Consensus 740 ~nqA------L~HpFi~~ 751 (752)
T KOG0670|consen 740 VNQA------LKHPFITE 751 (752)
T ss_pred HHHH------hcCCcccC
Confidence 9999 78999863
No 386
>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]
Probab=99.97 E-value=1.4e-31 Score=286.37 Aligned_cols=256 Identities=33% Similarity=0.553 Sum_probs=203.7
Q ss_pred cceeEeeeeccCCcEEEEEEEEeCCceEEEEEEecccCCHHHHHHHHHHHHHHHhC--CCCceeeEeceeecCC----ce
Q 003963 505 EDLTIGEQIGQGSCGTVYHAVWYGSQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRL--RHPNVLLFMGAVTSPQ----RL 578 (783)
Q Consensus 505 ~~y~i~~~LG~G~fG~Vy~a~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l--~HpnIv~l~~~~~~~~----~~ 578 (783)
...++.+.||+|.||.||+|...+ +.||||++.. ...+.+..|.+|+... +|+||++|+++-.... .+
T Consensus 210 ~pl~l~eli~~Grfg~V~KaqL~~-~~VAVKifp~-----~~kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~ekr~t~~~~ey 283 (534)
T KOG3653|consen 210 DPLQLLELIGRGRFGCVWKAQLDN-RLVAVKIFPE-----QEKQSFQNEKNIYSLPGMKHENILQFIGAEKRGTADRMEY 283 (534)
T ss_pred CchhhHHHhhcCccceeehhhccC-ceeEEEecCH-----HHHHHHHhHHHHHhccCccchhHHHhhchhccCCccccce
Confidence 456778899999999999999765 6999999854 3457888899988854 7999999999876544 78
Q ss_pred EEEEEecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhC-------CCCEEecCCCCCCEEEcCCCcEEEEecC
Q 003963 579 CIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHC-------NPPIIHRDLKSSNLLVDKHWTVKVGDFG 651 (783)
Q Consensus 579 ~lV~E~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~-------~~~IvHrDIKp~NILl~~~~~vkL~DFG 651 (783)
+||++|.+.|+|.++|..+ .++|....+++..|++||+|||+- +++|+|||||..||||.++++..|+|||
T Consensus 284 wLVt~fh~kGsL~dyL~~n--tisw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLvK~DlTccIaDFG 361 (534)
T KOG3653|consen 284 WLVTEFHPKGSLCDYLKAN--TISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLVKNDLTCCIADFG 361 (534)
T ss_pred eEEeeeccCCcHHHHHHhc--cccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccceEEccCCcEEeeccc
Confidence 9999999999999999875 489999999999999999999973 2569999999999999999999999999
Q ss_pred CCccccccc--ccccCCCCCCcccCcccccCCCC-C-----chhHHHHHHHHHHHHHcC------------CCCCC----
Q 003963 652 LSRLKHETY--LTTKTGKGTPQWMAPEVLRNEPS-D-----EKSDVYSFGVILWELATE------------KIPWD---- 707 (783)
Q Consensus 652 la~~~~~~~--~~~~~~~Gt~~Y~aPE~~~~~~~-s-----~~sDIwSLG~il~elltG------------~~Pf~---- 707 (783)
+|..+.... ......+||.+|||||++.|.-. . .+.||||+|.+||||++. .+||+
T Consensus 362 LAl~~~p~~~~~d~~~qVGT~RYMAPEvLEgainl~d~~Afkr~DvYamgLVLWEi~SRC~~~~~~~vp~Yqlpfe~evG 441 (534)
T KOG3653|consen 362 LALRLEPGKPQGDTHGQVGTRRYMAPEVLEGAINLQDRDAFKRIDVYAMGLVLWEIASRCTDADPGPVPEYQLPFEAEVG 441 (534)
T ss_pred eeEEecCCCCCcchhhhhhhhhhcCHHHHhhhcccccHHHHHHHHHHHHHHHHHHHHhhcccccCCCCCcccCchhHHhc
Confidence 998765332 22234689999999999987542 2 368999999999999974 12332
Q ss_pred -CCChHHHHHHhhcccccccCCCCC-----CHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHh
Q 003963 708 -NLNSMQVIGAVGFMNQRLEIPKDV-----DPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYF 768 (783)
Q Consensus 708 -~~~~~~~~~~i~~~~~~~~~~~~~-----s~~l~~LI~~cL~~dP~~RPsa~ell~~L~~L~~~~f 768 (783)
.....++-..+...+.++.+|..+ ..-+.+.+..||..|++.|.|+.-+-+++.++.+..-
T Consensus 442 ~hPt~e~mq~~VV~kK~RP~~p~~W~~h~~~~~l~et~EeCWDhDaeARLTA~Cv~eR~~~l~~~~~ 508 (534)
T KOG3653|consen 442 NHPTLEEMQELVVRKKQRPKIPDAWRKHAGMAVLCETIEECWDHDAEARLTAGCVEERMAELMMLWE 508 (534)
T ss_pred CCCCHHHHHHHHHhhccCCCChhhhhcCccHHHHHHHHHHHcCCchhhhhhhHHHHHHHHHHhccCC
Confidence 011122223333344566666543 2457899999999999999999999999999988763
No 387
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=99.97 E-value=1.8e-31 Score=332.25 Aligned_cols=247 Identities=23% Similarity=0.396 Sum_probs=191.5
Q ss_pred ccceeEeeeeccCCcEEEEEEEEe-CCceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEeceeecCCceEEEE
Q 003963 504 WEDLTIGEQIGQGSCGTVYHAVWY-GSQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIVT 582 (783)
Q Consensus 504 ~~~y~i~~~LG~G~fG~Vy~a~~~-~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lV~ 582 (783)
...|...+.||+|+||.||+|.+. .+..||||++...... ...|+.+++.++|||||++++++......|+||
T Consensus 689 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~------~~~~~~~l~~l~HpnIv~~~~~~~~~~~~~lv~ 762 (968)
T PLN00113 689 LSSLKEENVISRGKKGASYKGKSIKNGMQFVVKEINDVNSI------PSSEIADMGKLQHPNIVKLIGLCRSEKGAYLIH 762 (968)
T ss_pred HhhCCcccEEccCCCeeEEEEEECCCCcEEEEEEccCCccc------cHHHHHHHhhCCCCCcceEEEEEEcCCCCEEEE
Confidence 345677789999999999999974 4578999988644321 124688999999999999999999999999999
Q ss_pred EecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhC-CCCEEecCCCCCCEEEcCCCcEEEEecCCCcccccccc
Q 003963 583 EFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHC-NPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETYL 661 (783)
Q Consensus 583 E~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~-~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~~ 661 (783)
||+++|+|.+++.. +++..+..++.||+.||+|||.. ..+|+||||||+||+++.++..++. ||.......
T Consensus 763 Ey~~~g~L~~~l~~----l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlkp~Nil~~~~~~~~~~-~~~~~~~~~--- 834 (968)
T PLN00113 763 EYIEGKNLSEVLRN----LSWERRRKIAIGIAKALRFLHCRCSPAVVVGNLSPEKIIIDGKDEPHLR-LSLPGLLCT--- 834 (968)
T ss_pred eCCCCCcHHHHHhc----CCHHHHHHHHHHHHHHHHHhccCCCCCeecCCCCHHhEEECCCCceEEE-ecccccccc---
Confidence 99999999999963 78899999999999999999943 2239999999999999998888775 665543221
Q ss_pred cccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChH--HHHHHhhcc--c------ccccCC---
Q 003963 662 TTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSM--QVIGAVGFM--N------QRLEIP--- 728 (783)
Q Consensus 662 ~~~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~elltG~~Pf~~~~~~--~~~~~i~~~--~------~~~~~~--- 728 (783)
.....|++.|+|||++.+..++.++|||||||++|||++|+.||...... ......... . ....+.
T Consensus 835 -~~~~~~t~~y~aPE~~~~~~~~~~sDv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 913 (968)
T PLN00113 835 -DTKCFISSAYVAPETRETKDITEKSDIYGFGLILIELLTGKSPADAEFGVHGSIVEWARYCYSDCHLDMWIDPSIRGDV 913 (968)
T ss_pred -CCCccccccccCcccccCCCCCcccchhhHHHHHHHHHhCCCCCCcccCCCCcHHHHHHHhcCccchhheeCccccCCC
Confidence 12336789999999999999999999999999999999999998532110 111100000 0 001111
Q ss_pred ---CCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHH
Q 003963 729 ---KDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQR 765 (783)
Q Consensus 729 ---~~~s~~l~~LI~~cL~~dP~~RPsa~ell~~L~~L~~ 765 (783)
.....++.+++.+||+.||.+||++.++++.|+++..
T Consensus 914 ~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~evl~~L~~~~~ 953 (968)
T PLN00113 914 SVNQNEIVEVMNLALHCTATDPTARPCANDVLKTLESASR 953 (968)
T ss_pred CccHHHHHHHHHHHHhhCcCCchhCcCHHHHHHHHHHhhc
Confidence 1112356789999999999999999999999988755
No 388
>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]
Probab=99.97 E-value=4.1e-31 Score=275.98 Aligned_cols=263 Identities=27% Similarity=0.452 Sum_probs=221.5
Q ss_pred cccccceeEeeeeccCCcEEEEEEEEeC------CceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEeceeec
Q 003963 501 EILWEDLTIGEQIGQGSCGTVYHAVWYG------SQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTS 574 (783)
Q Consensus 501 e~~~~~y~i~~~LG~G~fG~Vy~a~~~~------~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~ 574 (783)
.+...++++.-.+-+|+||+||.|.+.. .+.|.+|.++... ++-++..+..|--+|..+.|||+..+.+++..
T Consensus 280 ~v~r~Rv~l~~llqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk~~A-S~iQv~~~L~es~lly~~sH~nll~V~~V~ie 358 (563)
T KOG1024|consen 280 TVQRCRVRLSCLLQEGTFGRIYRGIWREEDTYNDCQEVLVKTVKQHA-SQIQVNLLLQESMLLYGASHPNLLSVLGVSIE 358 (563)
T ss_pred hhhhhheechhhhhcCchhheeeeeecccCCcchHHHHHHHHHHhcc-cHHHHHHHHHHHHHHhcCcCCCccceeEEEee
Confidence 3445678888899999999999997643 2457777765443 55667788899999999999999999998754
Q ss_pred -CCceEEEEEecCCCCHHHHHhh-------cCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEE
Q 003963 575 -PQRLCIVTEFLPRGSLFRLLQR-------NTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVK 646 (783)
Q Consensus 575 -~~~~~lV~E~~~ggsL~~~L~~-------~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vk 646 (783)
....++++.++.-|+|..+|.. ....++..+...++.|++.||+|||+++ |||.||..+|.+|++.-+||
T Consensus 359 ~~~~P~V~y~~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hlh~~~--ViHkDiAaRNCvIdd~LqVk 436 (563)
T KOG1024|consen 359 DYATPFVLYPATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHLHNHG--VIHKDIAARNCVIDDQLQVK 436 (563)
T ss_pred ccCcceEEEeccCcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHHHhcC--cccchhhhhcceehhheeEE
Confidence 4678999999999999999972 2344677888899999999999999999 99999999999999999999
Q ss_pred EEecCCCccc-cccccccc-CCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCChHHHHHHhhcccc
Q 003963 647 VGDFGLSRLK-HETYLTTK-TGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELAT-EKIPWDNLNSMQVIGAVGFMNQ 723 (783)
Q Consensus 647 L~DFGla~~~-~~~~~~~~-~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~ellt-G~~Pf~~~~~~~~~~~i~~~~~ 723 (783)
|+|-.+++.. +..+.... .......||+||.+.+..++.++|+||||++||||+| |+.||.+.++.++...+. ...
T Consensus 437 ltDsaLSRDLFP~DYhcLGDnEnRPvkWMslEal~n~~yssasDvWsfGVllWELmtlg~~PyaeIDPfEm~~ylk-dGy 515 (563)
T KOG1024|consen 437 LTDSALSRDLFPGDYHCLGDNENRPVKWMSLEALQNSHYSSASDVWSFGVLLWELMTLGKLPYAEIDPFEMEHYLK-DGY 515 (563)
T ss_pred eccchhccccCcccccccCCCCCCcccccCHHHHhhhhhcchhhhHHHHHHHHHHHhcCCCCccccCHHHHHHHHh-ccc
Confidence 9999998743 33322211 1223568999999999999999999999999999999 999999999998876664 567
Q ss_pred cccCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHH
Q 003963 724 RLEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQY 767 (783)
Q Consensus 724 ~~~~~~~~s~~l~~LI~~cL~~dP~~RPsa~ell~~L~~L~~~~ 767 (783)
+...|.++|+++..++..||...|++||++.++...|.++..+.
T Consensus 516 RlaQP~NCPDeLf~vMacCWallpeeRPsf~Qlv~cLseF~~ql 559 (563)
T KOG1024|consen 516 RLAQPFNCPDELFTVMACCWALLPEERPSFSQLVICLSEFHTQL 559 (563)
T ss_pred eecCCCCCcHHHHHHHHHHHhcCcccCCCHHHHHHHHHHHHHHH
Confidence 88899999999999999999999999999999999998887654
No 389
>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]
Probab=99.97 E-value=4.3e-32 Score=265.86 Aligned_cols=253 Identities=19% Similarity=0.380 Sum_probs=202.6
Q ss_pred ccceeEeeeeccCCcEEEEEEEEe-CCceEEEEEEecccCCHHHHHHHHHHHHHHHhCC-CCceeeEeceeecCC--ceE
Q 003963 504 WEDLTIGEQIGQGSCGTVYHAVWY-GSQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLR-HPNVLLFMGAVTSPQ--RLC 579 (783)
Q Consensus 504 ~~~y~i~~~LG~G~fG~Vy~a~~~-~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~-HpnIv~l~~~~~~~~--~~~ 579 (783)
.++|++.+++|+|.|+.||.|... ++++++||+++... .+.+.+|+.||+.|. ||||++++++..++. ...
T Consensus 37 ~ddYeivrk~GRGKYSEVFeg~~~~~~eK~ViKiLKPVk-----kkKIkREikIL~nL~gg~NIi~L~DiV~Dp~Sktpa 111 (338)
T KOG0668|consen 37 QDDYEIVRKVGRGKYSEVFEGINITNNEKCVIKILKPVK-----KKKIKREIKILQNLRGGPNIIKLLDIVKDPESKTPS 111 (338)
T ss_pred cchHHHHHHHcCccHhhHhcccccCCCceEEEeeechHH-----HHHHHHHHHHHHhccCCCCeeehhhhhcCccccCch
Confidence 578999999999999999999864 45789999987654 367899999999997 999999999998764 467
Q ss_pred EEEEecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcC-CCcEEEEecCCCccccc
Q 003963 580 IVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDK-HWTVKVGDFGLSRLKHE 658 (783)
Q Consensus 580 lV~E~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~-~~~vkL~DFGla~~~~~ 658 (783)
+|+||++..+...+.. .++...+..++.+++.||.|||+.| |+|||+||.|++|+. ...++|+|+|+|.+.+.
T Consensus 112 LiFE~v~n~Dfk~ly~----tl~d~dIryY~~elLkALdyCHS~G--ImHRDVKPhNvmIdh~~rkLrlIDWGLAEFYHp 185 (338)
T KOG0668|consen 112 LIFEYVNNTDFKQLYP----TLTDYDIRYYIYELLKALDYCHSMG--IMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHP 185 (338)
T ss_pred hHhhhhccccHHHHhh----hhchhhHHHHHHHHHHHHhHHHhcC--cccccCCcceeeechhhceeeeeecchHhhcCC
Confidence 9999998877776654 3677788899999999999999999 999999999999985 45799999999988776
Q ss_pred ccccccCCCCCCcccCcccccCCC-CCchhHHHHHHHHHHHHHcCCCCC-CCCChHHHHHHhhcccc-----------cc
Q 003963 659 TYLTTKTGKGTPQWMAPEVLRNEP-SDEKSDVYSFGVILWELATEKIPW-DNLNSMQVIGAVGFMNQ-----------RL 725 (783)
Q Consensus 659 ~~~~~~~~~Gt~~Y~aPE~~~~~~-~s~~sDIwSLG~il~elltG~~Pf-~~~~~~~~~~~i~~~~~-----------~~ 725 (783)
... ....+.+..|--||.+..-+ +++.-|+|||||+|..|+..+.|| .+.+....+..+....+ .+
T Consensus 186 ~~e-YnVRVASRyfKGPELLVdy~~YDYSLD~WS~GcmlA~miFrkepFFhG~dN~DQLVkIakVLGt~el~~Yl~KY~i 264 (338)
T KOG0668|consen 186 GKE-YNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVKIAKVLGTDELYAYLNKYQI 264 (338)
T ss_pred Cce-eeeeeehhhcCCchheeechhccccHHHHHHHHHHHHHHhccCcccCCCCCHHHHHHHHHHhChHHHHHHHHHHcc
Confidence 533 33456688899999987654 799999999999999999999887 33333322222211100 00
Q ss_pred cCC------------------------CCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhcCcCC
Q 003963 726 EIP------------------------KDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQASRST 774 (783)
Q Consensus 726 ~~~------------------------~~~s~~l~~LI~~cL~~dP~~RPsa~ell~~L~~L~~~~f~~~~~~ 774 (783)
.++ ...++++.+|+.++|..|-.+|+|+.|. +.|+||...+.+
T Consensus 265 ~Ldp~~~~i~~~~~rk~w~~Fi~~~n~hl~~peaiDlldklLrYDHqeRlTakEa------m~HpyF~~~~~~ 331 (338)
T KOG0668|consen 265 DLDPQFEDILGRHSRKPWSRFINSENQHLVSPEAIDLLDKLLRYDHQERLTAKEA------MAHPYFAPVREA 331 (338)
T ss_pred CCChhHhhHhhccccccHHHhCCccccccCChHHHHHHHHHHhhccccccchHHH------hcCchHHHHHHH
Confidence 000 1246899999999999999999999999 778999766544
No 390
>PLN03225 Serine/threonine-protein kinase SNT7; Provisional
Probab=99.97 E-value=9.1e-31 Score=304.80 Aligned_cols=258 Identities=19% Similarity=0.218 Sum_probs=176.5
Q ss_pred ccccceeEeeeeccCCcEEEEEEEEeC-----CceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEece-----
Q 003963 502 ILWEDLTIGEQIGQGSCGTVYHAVWYG-----SQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGA----- 571 (783)
Q Consensus 502 ~~~~~y~i~~~LG~G~fG~Vy~a~~~~-----~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~----- 571 (783)
...++|.+.++||+|+||.||+|.+.. +..||||++........ ... ..+....+.+++.++..
T Consensus 129 ~~~~~y~l~~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~~~~~~~e~----~~~--e~l~~~~~~~~~~~~~~~~~~~ 202 (566)
T PLN03225 129 FKKDDFVLGKKLGEGAFGVVYKASLVNKQSKKEGKYVLKKATEYGAVEI----WMN--ERVRRACPNSCADFVYGFLEPV 202 (566)
T ss_pred CccCCeEEeEEEeeCCCeEEEEEEEcCCccccCcEEEEEEecccchhHH----HHH--HHHHhhchhhHHHHHHhhhccc
Confidence 356799999999999999999999865 46799998754321111 111 11222223333333222
Q ss_pred -eecCCceEEEEEecCCCCHHHHHhhcCCcc-------------------hHHHHHHHHHHHHHHHHHHHhCCCCEEecC
Q 003963 572 -VTSPQRLCIVTEFLPRGSLFRLLQRNTTKL-------------------DWRRRILMALDIARGVSYLHHCNPPIIHRD 631 (783)
Q Consensus 572 -~~~~~~~~lV~E~~~ggsL~~~L~~~~~~l-------------------~~~~~~~i~~qi~~aL~~LH~~~~~IvHrD 631 (783)
......+++||||+++++|.+++....... ....+..++.||+.||+|||+++ |+|||
T Consensus 203 ~~~~~~~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH~~g--IiHRD 280 (566)
T PLN03225 203 SSKKEDEYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLHSTG--IVHRD 280 (566)
T ss_pred ccccCCceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHHHCC--EEeCc
Confidence 234567999999999999999987543211 23345678999999999999998 99999
Q ss_pred CCCCCEEEcC-CCcEEEEecCCCcccccc-cccccCCCCCCcccCcccccCCC----------------------CCchh
Q 003963 632 LKSSNLLVDK-HWTVKVGDFGLSRLKHET-YLTTKTGKGTPQWMAPEVLRNEP----------------------SDEKS 687 (783)
Q Consensus 632 IKp~NILl~~-~~~vkL~DFGla~~~~~~-~~~~~~~~Gt~~Y~aPE~~~~~~----------------------~s~~s 687 (783)
|||+|||++. ++.+||+|||+++..... .......++++.|+|||.+.... ++.++
T Consensus 281 LKP~NILl~~~~~~~KL~DFGlA~~l~~~~~~~~~~~~~t~~Y~APE~~~~~~~~~~~~~~~~~~~~sp~l~~~~~~~k~ 360 (566)
T PLN03225 281 VKPQNIIFSEGSGSFKIIDLGAAADLRVGINYIPKEFLLDPRYAAPEQYIMSTQTPSAPSAPVATALSPVLWQLNLPDRF 360 (566)
T ss_pred CCHHHEEEeCCCCcEEEEeCCCccccccccccCCcccccCCCccChHHhhccCCCCCCccccccccccchhccccCCCCc
Confidence 9999999985 579999999999754322 12233567899999999764322 23456
Q ss_pred HHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhcccc-----------c--------ccCCCCCCHHHHHHHHHhhhhCCC
Q 003963 688 DVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQ-----------R--------LEIPKDVDPRWAAIVESCWHSDPQ 748 (783)
Q Consensus 688 DIwSLG~il~elltG~~Pf~~~~~~~~~~~i~~~~~-----------~--------~~~~~~~s~~l~~LI~~cL~~dP~ 748 (783)
|||||||+||||+++..|+... .......+..... . ..+....+....+||.+||++||.
T Consensus 361 DVwSlGviL~el~~~~~~~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~dLi~~mL~~dP~ 439 (566)
T PLN03225 361 DIYSAGLIFLQMAFPNLRSDSN-LIQFNRQLKRNDYDLVAWRKLVEPRASPDLRRGFEVLDLDGGAGWELLKSMMRFKGR 439 (566)
T ss_pred ccHHHHHHHHHHHhCcCCCchH-HHHHHHHHHhcCCcHHHHHHhhccccchhhhhhhhhccccchHHHHHHHHHccCCcc
Confidence 9999999999999987765432 1111111110000 0 001111223456899999999999
Q ss_pred CCCCHHHHHHHHHHHHHHHhhcCcCC
Q 003963 749 CRPSFQELVDKLRDLQRQYFQASRST 774 (783)
Q Consensus 749 ~RPsa~ell~~L~~L~~~~f~~~~~~ 774 (783)
+|||+.++ |+|+||+.....
T Consensus 440 kR~ta~e~------L~Hpff~~~~~~ 459 (566)
T PLN03225 440 QRISAKAA------LAHPYFDREGLL 459 (566)
T ss_pred cCCCHHHH------hCCcCcCCCCcc
Confidence 99999999 789999765543
No 391
>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=1.1e-30 Score=277.70 Aligned_cols=256 Identities=33% Similarity=0.597 Sum_probs=201.9
Q ss_pred ccccceeEeeeeccCCcEEEEEEEEeCCceEEEEEEecccCCHHHHHHHHHHHHHHHh--CCCCceeeEeceeecCC---
Q 003963 502 ILWEDLTIGEQIGQGSCGTVYHAVWYGSQDVAVKVFSRQEYSDEVIHSFRQEVSLMKR--LRHPNVLLFMGAVTSPQ--- 576 (783)
Q Consensus 502 ~~~~~y~i~~~LG~G~fG~Vy~a~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~--l~HpnIv~l~~~~~~~~--- 576 (783)
.+..+..+.+.||+|.||.||+|.+++. .||||+|.... .....+|.+|++. |+|+||+.|++.-..+.
T Consensus 208 TiarqI~L~e~IGkGRyGEVwrG~wrGe-~VAVKiF~srd-----E~SWfrEtEIYqTvmLRHENILgFIaaD~~~~gs~ 281 (513)
T KOG2052|consen 208 TIARQIVLQEIIGKGRFGEVWRGRWRGE-DVAVKIFSSRD-----ERSWFRETEIYQTVMLRHENILGFIAADNKDNGSW 281 (513)
T ss_pred hhhheeEEEEEecCccccceeeccccCC-ceEEEEecccc-----hhhhhhHHHHHHHHHhccchhhhhhhccccCCCce
Confidence 3457789999999999999999999864 89999997643 1456778999885 59999999998765443
Q ss_pred -ceEEEEEecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhC-----C-CCEEecCCCCCCEEEcCCCcEEEEe
Q 003963 577 -RLCIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHC-----N-PPIIHRDLKSSNLLVDKHWTVKVGD 649 (783)
Q Consensus 577 -~~~lV~E~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~-----~-~~IvHrDIKp~NILl~~~~~vkL~D 649 (783)
+++||.+|.+.|+|++||.+ ..++....++++..++.||++||.. | +.|.|||||..||||.+++...|+|
T Consensus 282 TQLwLvTdYHe~GSL~DyL~r--~tv~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRDlKSKNILVKkn~~C~IAD 359 (513)
T KOG2052|consen 282 TQLWLVTDYHEHGSLYDYLNR--NTVTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIAD 359 (513)
T ss_pred EEEEEeeecccCCcHHHHHhh--ccCCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhccccccccEEEccCCcEEEee
Confidence 58999999999999999987 4588999999999999999999963 2 4599999999999999999999999
Q ss_pred cCCCcccccc----cccccCCCCCCcccCcccccCCCC-----C-chhHHHHHHHHHHHHHc----------CCCCCCCC
Q 003963 650 FGLSRLKHET----YLTTKTGKGTPQWMAPEVLRNEPS-----D-EKSDVYSFGVILWELAT----------EKIPWDNL 709 (783)
Q Consensus 650 FGla~~~~~~----~~~~~~~~Gt~~Y~aPE~~~~~~~-----s-~~sDIwSLG~il~ellt----------G~~Pf~~~ 709 (783)
+|+|...... .......+||.+|||||++...-. + ..+||||||.++||++. -.+||.+.
T Consensus 360 LGLAv~h~~~t~~idi~~N~rVGTKRYMAPEvLdetin~~~Fesyk~ADIYafgLVlWEiarRc~~ggi~eey~~Pyyd~ 439 (513)
T KOG2052|consen 360 LGLAVRHDSDTDTIDIPPNPRVGTKRYMAPEVLDETINMKHFESYKRADIYAFGLVLWEIARRCESGGIVEEYQLPYYDV 439 (513)
T ss_pred ceeeEEecccCCcccCCCCCccceeeccChHHhhhhcChhhhhhhhHHHHHHHHHHHHHHHHHhhcCCEehhhcCCcccC
Confidence 9999754433 223446689999999999864321 2 36999999999999986 26788654
Q ss_pred Ch-----HHHHHHhhcccccccCCCCCC--H---HHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHH
Q 003963 710 NS-----MQVIGAVGFMNQRLEIPKDVD--P---RWAAIVESCWHSDPQCRPSFQELVDKLRDLQR 765 (783)
Q Consensus 710 ~~-----~~~~~~i~~~~~~~~~~~~~s--~---~l~~LI~~cL~~dP~~RPsa~ell~~L~~L~~ 765 (783)
-+ .+....+.....++.+|..+. + .+..|++.||..+|.-|.|+-.+.+.|.++..
T Consensus 440 Vp~DPs~eeMrkVVCv~~~RP~ipnrW~s~~~l~~m~klMkeCW~~Np~aRltALriKKtl~~l~~ 505 (513)
T KOG2052|consen 440 VPSDPSFEEMRKVVCVQKLRPNIPNRWKSDPALRVMAKLMKECWYANPAARLTALRIKKTLAKLSN 505 (513)
T ss_pred CCCCCCHHHHhcceeecccCCCCCcccccCHHHHHHHHHHHHhhcCCchhhhHHHHHHHHHHHHhc
Confidence 32 222222333334555555443 2 46778999999999999999999888887753
No 392
>PLN03224 probable serine/threonine protein kinase; Provisional
Probab=99.97 E-value=1.9e-30 Score=295.54 Aligned_cols=260 Identities=19% Similarity=0.238 Sum_probs=188.1
Q ss_pred cccceeEeeeeccCCcEEEEEEEE-----------------eCCceEEEEEEecccCCH--H----------HHHHHHHH
Q 003963 503 LWEDLTIGEQIGQGSCGTVYHAVW-----------------YGSQDVAVKVFSRQEYSD--E----------VIHSFRQE 553 (783)
Q Consensus 503 ~~~~y~i~~~LG~G~fG~Vy~a~~-----------------~~~~~vAiK~i~~~~~~~--~----------~~~~~~~E 553 (783)
..++|.+.++||+|+||.||+|.+ ..++.||||.+....... + ..+....|
T Consensus 143 ~~d~F~i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~e~~~~~~~~e~~~vE 222 (507)
T PLN03224 143 SSDDFQLRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLKTGTLAKGSAETGMVE 222 (507)
T ss_pred cccCceEeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHhhhhhhhcccchhHHH
Confidence 457899999999999999999964 123469999986432110 0 11233446
Q ss_pred HHHHHhCCCCce-----eeEeceeec--------CCceEEEEEecCCCCHHHHHhhcC----------------------
Q 003963 554 VSLMKRLRHPNV-----LLFMGAVTS--------PQRLCIVTEFLPRGSLFRLLQRNT---------------------- 598 (783)
Q Consensus 554 i~il~~l~HpnI-----v~l~~~~~~--------~~~~~lV~E~~~ggsL~~~L~~~~---------------------- 598 (783)
+.++.+++|.++ ++++++|.. .+..++||||+++++|.+++....
T Consensus 223 ~~~l~~l~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~~~ 302 (507)
T PLN03224 223 AYMCAKIKRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDNMP 302 (507)
T ss_pred HHHHHHhhcccchhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhhcc
Confidence 777777776554 677777653 346899999999999999986421
Q ss_pred -CcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCcccccccc-cccCCCCCCcccCcc
Q 003963 599 -TKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETYL-TTKTGKGTPQWMAPE 676 (783)
Q Consensus 599 -~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~~-~~~~~~Gt~~Y~aPE 676 (783)
..+++..++.++.|++.+|.|||+.+ |+||||||+|||++.++.+||+|||++........ ......+++.|+|||
T Consensus 303 ~~~~~~~~~~~i~~ql~~aL~~lH~~~--ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~g~~tp~Y~aPE 380 (507)
T PLN03224 303 QDKRDINVIKGVMRQVLTGLRKLHRIG--IVHRDIKPENLLVTVDGQVKIIDFGAAVDMCTGINFNPLYGMLDPRYSPPE 380 (507)
T ss_pred cccCCHHHHHHHHHHHHHHHHHHHHCC--eecCCCchHhEEECCCCcEEEEeCcCccccccCCccCccccCCCcceeChh
Confidence 12356678889999999999999998 99999999999999999999999999865433211 122234589999999
Q ss_pred cccCCCC----------------------CchhHHHHHHHHHHHHHcCCC-CCCCCChHHHH-----------HHhhccc
Q 003963 677 VLRNEPS----------------------DEKSDVYSFGVILWELATEKI-PWDNLNSMQVI-----------GAVGFMN 722 (783)
Q Consensus 677 ~~~~~~~----------------------s~~sDIwSLG~il~elltG~~-Pf~~~~~~~~~-----------~~i~~~~ 722 (783)
.+..... ..+.||||+||++|+|++|.+ ||......... ..+....
T Consensus 381 ~l~~~~~~~~~~~~~~~~~l~~~~~~yg~~~~~DvwSlGvil~em~~~~l~p~~~~~~f~~~~~~~~~~~~~~r~~~~~~ 460 (507)
T PLN03224 381 ELVMPQSCPRAPAPAMAALLSPFAWLYGRPDLFDSYTAGVLLMQMCVPELRPVANIRLFNTELRQYDNDLNRWRMYKGQK 460 (507)
T ss_pred hhcCCCCCCccchhhhhhhhhhhHHhcCCCCccchhhHHHHHHHHHhCCCCCccchhhhhhHHhhccchHHHHHhhcccC
Confidence 8754321 124699999999999999976 77543222111 0111112
Q ss_pred ccccCCCCCCHHHHHHHHHhhhhCC---CCCCCHHHHHHHHHHHHHHHhhc
Q 003963 723 QRLEIPKDVDPRWAAIVESCWHSDP---QCRPSFQELVDKLRDLQRQYFQA 770 (783)
Q Consensus 723 ~~~~~~~~~s~~l~~LI~~cL~~dP---~~RPsa~ell~~L~~L~~~~f~~ 770 (783)
..+......++...+||.+||..+| .+|+|+.++ |.|+||..
T Consensus 461 ~~~~~~d~~s~~~~dLi~~LL~~~~~~~~~RlSa~ea------L~Hp~f~~ 505 (507)
T PLN03224 461 YDFSLLDRNKEAGWDLACKLITKRDQANRGRLSVGQA------LSHRFFLP 505 (507)
T ss_pred CCcccccccChHHHHHHHHHhccCCCCcccCCCHHHH------hCCCCcCC
Confidence 2233445678999999999999876 689999999 78999954
No 393
>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=2.4e-30 Score=277.36 Aligned_cols=255 Identities=23% Similarity=0.365 Sum_probs=193.5
Q ss_pred ccceeEeeeeccCCcEEEEEEEEeCC-ceEEEEEEecccCCHHHHHHHHHHHHHHHhCC-----C---CceeeEeceeec
Q 003963 504 WEDLTIGEQIGQGSCGTVYHAVWYGS-QDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLR-----H---PNVLLFMGAVTS 574 (783)
Q Consensus 504 ~~~y~i~~~LG~G~fG~Vy~a~~~~~-~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~-----H---pnIv~l~~~~~~ 574 (783)
..+|.+.++||-|-|++||++++..+ +.||+|+++... ...+....||.+|+.++ | .+||+|++.|..
T Consensus 77 ~gRY~v~rKLGWGHFSTVWLawDtq~~r~VAlKVvKSAq---hYtEaAlDEIklL~~v~~~Dp~~~~~~~VV~LlD~Fkh 153 (590)
T KOG1290|consen 77 GGRYHVQRKLGWGHFSTVWLAWDTQNKRYVALKVVKSAQ---HYTEAALDEIKLLQQVREGDPNDPGKKCVVQLLDHFKH 153 (590)
T ss_pred CceEEEEEeccccccceeEEEeeccCCeEEEEEEEehhh---HHHHHHHHHHHHHHHHHhcCCCCCCCceeeeeecccee
Confidence 47999999999999999999998654 679999987543 34456778999999984 2 479999999964
Q ss_pred ----CCceEEEEEecCCCCHHHHHhhc-CCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCC-------
Q 003963 575 ----PQRLCIVTEFLPRGSLFRLLQRN-TTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKH------- 642 (783)
Q Consensus 575 ----~~~~~lV~E~~~ggsL~~~L~~~-~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~------- 642 (783)
..++|||+|++ |.+|..+|... ...++...++.|++||+.||.|||..- +|||.||||+|||+-.+
T Consensus 154 sGpNG~HVCMVfEvL-GdnLLklI~~s~YrGlpl~~VK~I~~qvL~GLdYLH~ec-gIIHTDlKPENvLl~~~e~~~~~~ 231 (590)
T KOG1290|consen 154 SGPNGQHVCMVFEVL-GDNLLKLIKYSNYRGLPLSCVKEICRQVLTGLDYLHREC-GIIHTDLKPENVLLCSTEIDPAKD 231 (590)
T ss_pred cCCCCcEEEEEehhh-hhHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHHHHHhc-CccccCCCcceeeeeccccchhhh
Confidence 45799999999 77999988753 455899999999999999999999642 39999999999998200
Q ss_pred --------------------------------------------------------------------------------
Q 003963 643 -------------------------------------------------------------------------------- 642 (783)
Q Consensus 643 -------------------------------------------------------------------------------- 642 (783)
T Consensus 232 ~~~a~e~~~~~p~~s~s~~~t~~d~~~~~~~~~~s~~~~k~~~kk~~r~~~~~~~~l~~~~~~~~~~~~~s~n~~~~~n~ 311 (590)
T KOG1290|consen 232 AREAGEATTSLPKMSPSAVSTRPDALQRMAAEPMSKSKFKKMKKKLKRQAKKLEASLAGLEGIEEEPNQESYNNEPRING 311 (590)
T ss_pred hhhhccccccCCCCCcccccccccccchhhccccchhhHHHHHHHHhhhhhhhhhhhcccccccccccccccccccCCCc
Confidence
Q ss_pred -------------------------------------------------------------------------------C
Q 003963 643 -------------------------------------------------------------------------------W 643 (783)
Q Consensus 643 -------------------------------------------------------------------------------~ 643 (783)
-
T Consensus 312 ~~~~v~~~~~~~~~~~~~~~~n~~~k~~e~~~~~~~sl~~~~~~~~~t~~~~~~~s~~s~~~~~~n~~v~p~~~~~~~di 391 (590)
T KOG1290|consen 312 NESTVERSTLEEDSNENGNRENLPIKSPENFRGNNTSLPESQLRDSATPSDGSLSSPSSPGTIASNPLVNPDIPLPECDI 391 (590)
T ss_pred cccchhhcccccccccccCCccccccCccccccccccccchhcccccccccccccCcCCccccccccccCCCCCCCccce
Confidence 0
Q ss_pred cEEEEecCCCcccccccccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCCh-------HH---
Q 003963 644 TVKVGDFGLSRLKHETYLTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNS-------MQ--- 713 (783)
Q Consensus 644 ~vkL~DFGla~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~elltG~~Pf~~~~~-------~~--- 713 (783)
+|||+|||.|++....+. ....|..|+|||++.|..|+..+||||++|++|||+||.+.|+.... ..
T Consensus 392 ~vKIaDlGNACW~~khFT---~DIQTRQYRapEVllGsgY~~~ADiWS~AC~~FELaTGDyLFePhsG~~Y~rDEDHiA~ 468 (590)
T KOG1290|consen 392 RVKIADLGNACWVHKHFT---EDIQTRQYRAPEVLLGSGYSTSADIWSTACMAFELATGDYLFEPHSGENYSRDEDHIAL 468 (590)
T ss_pred eEEEeeccchhhhhhhhc---hhhhhhhccCcceeecCCCCCchhHHHHHHHHHHhhcCceeecCCCCCCCCccHHHHHH
Confidence 245666666665444321 12358899999999999999999999999999999999999964322 11
Q ss_pred HHHHhhccc---------------c--------c-------------ccCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHH
Q 003963 714 VIGAVGFMN---------------Q--------R-------------LEIPKDVDPRWAAIVESCWHSDPQCRPSFQELV 757 (783)
Q Consensus 714 ~~~~i~~~~---------------~--------~-------------~~~~~~~s~~l~~LI~~cL~~dP~~RPsa~ell 757 (783)
+++.+..+. . + +.++..-..++.+||.-||+.+|++||||.++
T Consensus 469 i~ELLG~iPr~ia~~Gk~SRdFFnr~G~LrhI~~LK~WpL~~VL~eKY~~s~e~A~~fsdFL~PmLef~PeKR~tA~~c- 547 (590)
T KOG1290|consen 469 IMELLGKIPRKIALGGKYSRDFFNRRGELRHIRRLKPWPLYEVLIEKYEWSEEDAQQFSDFLSPMLEFDPEKRPTAAQC- 547 (590)
T ss_pred HHHHHhhccHHHHhcCcchHhhhccccceecccccCCCcHHHHHHHHhCCCHHHHHHHHHHHHHHHhcCccccccHHHH-
Confidence 111111000 0 0 01111112368899999999999999999999
Q ss_pred HHHHHHHHHHhhcCc
Q 003963 758 DKLRDLQRQYFQASR 772 (783)
Q Consensus 758 ~~L~~L~~~~f~~~~ 772 (783)
|+|+|++...
T Consensus 548 -----l~hPwLn~~~ 557 (590)
T KOG1290|consen 548 -----LKHPWLNPVA 557 (590)
T ss_pred -----hcCccccCCC
Confidence 7899997543
No 394
>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]
Probab=99.97 E-value=9.1e-31 Score=253.36 Aligned_cols=215 Identities=26% Similarity=0.394 Sum_probs=175.9
Q ss_pred ccccccceeEeeeeccCCcEEEEEEEEeCC-ceEEEEEEecccCCHHHHHHHHHHHHHHHhC-CCCceeeEeceeecCCc
Q 003963 500 YEILWEDLTIGEQIGQGSCGTVYHAVWYGS-QDVAVKVFSRQEYSDEVIHSFRQEVSLMKRL-RHPNVLLFMGAVTSPQR 577 (783)
Q Consensus 500 ~e~~~~~y~i~~~LG~G~fG~Vy~a~~~~~-~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l-~HpnIv~l~~~~~~~~~ 577 (783)
+++..++...+..||+|+||.|-+.++..+ .-.|+|.+...-. ....+++.+|+.+..+. ..|++|.|||.+.....
T Consensus 41 ~eV~ad~L~~i~elGrGayG~vekmrh~~sg~imAvKri~~tvn-~q~q~r~L~dldi~~r~~~CPf~V~FyGa~~regd 119 (282)
T KOG0984|consen 41 FEVPADDLVGIEELGRGAYGVVEKMRHIQSGTIMAVKRIRATVN-SQEQKRLLMDLDIIMRTVDCPFTVHFYGALFREGD 119 (282)
T ss_pred cccchhhhhhhhhhcCCccchhhheeeccCCeEEEEeeehhhcC-hHHHHHHHHhhhhhccCCCCCeEEEeehhhhcccc
Confidence 455566777788999999999999988654 5689998866543 33445677788876655 68999999999999999
Q ss_pred eEEEEEecCCCCHHHHHh---hcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCc
Q 003963 578 LCIVTEFLPRGSLFRLLQ---RNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSR 654 (783)
Q Consensus 578 ~~lV~E~~~ggsL~~~L~---~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~ 654 (783)
++|+||.| ..+|..+.. ..+..+++..+-+|+..+++||.|||++ ..|||||+||.||||+.+|+||+||||++-
T Consensus 120 vwIcME~M-~tSldkfy~~v~~~g~~ipE~vlGkIa~Svv~al~~L~~k-L~vIHRDvKPsNiLIn~~GqVKiCDFGIsG 197 (282)
T KOG0984|consen 120 VWICMELM-DTSLDKFYRKVLKKGGTIPEDVLGKIAVSVVHALEFLHSK-LSVIHRDVKPSNILINYDGQVKICDFGISG 197 (282)
T ss_pred EEEeHHHh-hhhHHHHHHHHHhcCCcCchHHhhHhHHHHHHHHHHHHHH-hhhhhccCCcceEEEccCCcEEEcccccce
Confidence 99999999 458877764 3566799999999999999999999986 359999999999999999999999999998
Q ss_pred ccccccccccCCCCCCcccCcccccC----CCCCchhHHHHHHHHHHHHHcCCCCCCCC-ChHHHHHHh
Q 003963 655 LKHETYLTTKTGKGTPQWMAPEVLRN----EPSDEKSDVYSFGVILWELATEKIPWDNL-NSMQVIGAV 718 (783)
Q Consensus 655 ~~~~~~~~~~~~~Gt~~Y~aPE~~~~----~~~s~~sDIwSLG~il~elltG~~Pf~~~-~~~~~~~~i 718 (783)
...++...+ ...|...|||||.+.. ..|+.++||||||++++||.+++.||... .+.+.+..+
T Consensus 198 ~L~dSiAkt-~daGCkpYmaPEri~~e~n~~gY~vksDvWSLGItmiElA~lr~PY~~w~tpF~qLkqv 265 (282)
T KOG0984|consen 198 YLVDSIAKT-MDAGCKPYMAPERINPELNQKGYSVKSDVWSLGITMIEMAILRFPYESWGTPFQQLKQV 265 (282)
T ss_pred eehhhhHHH-HhcCCCccCChhhcCcccCcccceeehhhhhhhhhhhhhhhccccccccCCHHHHHHHH
Confidence 776654332 2457888999999864 35788999999999999999999999866 455555554
No 395
>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.96 E-value=1.2e-31 Score=268.25 Aligned_cols=250 Identities=25% Similarity=0.385 Sum_probs=200.2
Q ss_pred ceeEeeeeccCCcEEEEEEEEe-CCceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEeceeecCC-----ceE
Q 003963 506 DLTIGEQIGQGSCGTVYHAVWY-GSQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQ-----RLC 579 (783)
Q Consensus 506 ~y~i~~~LG~G~fG~Vy~a~~~-~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~-----~~~ 579 (783)
+.+-.+.||.|+||+||.+.+. +++.|++|++.....+-...+.+.+|+.+|.-++|.|++..+++..-.. .+|
T Consensus 54 Di~PDRPIGYGAFGVVWsVTDPRdgrrvalkK~pnvfq~L~s~krvFre~kmLcfFkHdNVLSaLDILQPph~dfFqEiY 133 (449)
T KOG0664|consen 54 DIQPDRPIGYGAFGVVWSVTDPRSGKRVALKKMPNVFQNLASCKRVFREIKMLSSFRHDNVLSLLDILQPANPSFFQELY 133 (449)
T ss_pred cCCCCCcccccceeEEEeccCCCCccchhHhhcchHHHHHHHHHHHHHHHHHHHhhccccHHHHHHhcCCCCchHHHHHH
Confidence 4556689999999999999984 4678999998776655566678889999999999999999988876543 368
Q ss_pred EEEEecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCcccccc
Q 003963 580 IVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHET 659 (783)
Q Consensus 580 lV~E~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~~~ 659 (783)
++.|+| ..+|.+++-. ...++...++-+.+||++||.|||+.+ |.||||||.|+||+.+..+||||||+++.....
T Consensus 134 V~TELm-QSDLHKIIVS-PQ~Ls~DHvKVFlYQILRGLKYLHsA~--ILHRDIKPGNLLVNSNCvLKICDFGLARvee~d 209 (449)
T KOG0664|consen 134 VLTELM-QSDLHKIIVS-PQALTPDHVKVFVYQILRGLKYLHTAN--ILHRDIKPGNLLVNSNCILKICDFGLARTWDQR 209 (449)
T ss_pred HHHHHH-Hhhhhheecc-CCCCCcchhhhhHHHHHhhhHHHhhcc--hhhccCCCccEEeccCceEEecccccccccchh
Confidence 899999 4588888865 567999999999999999999999999 999999999999999999999999999865433
Q ss_pred ccccc-CCCCCCcccCcccccCCC-CCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhcccccc------------
Q 003963 660 YLTTK-TGKGTPQWMAPEVLRNEP-SDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRL------------ 725 (783)
Q Consensus 660 ~~~~~-~~~Gt~~Y~aPE~~~~~~-~s~~sDIwSLG~il~elltG~~Pf~~~~~~~~~~~i~~~~~~~------------ 725 (783)
..... ..+-|-.|+|||+++|.. |+.+.||||+||++.|++-.+..|...++.+.+..+..+.+.+
T Consensus 210 ~~~hMTqEVVTQYYRAPEiLMGaRhYs~AvDiWSVGCIFaELLgRrILFQAq~PiqQL~lItdLLGTPs~EaMr~ACEGA 289 (449)
T KOG0664|consen 210 DRLNMTHEVVTQYYRAPELLMGARRYTGAVDIWSVGCIFAELLQRKILFQAAGPIEQLQMIIDLLGTPSQEAMKYACEGA 289 (449)
T ss_pred hhhhhHHHHHHHHhccHHHhhcchhhcCccceehhhHHHHHHHhhhhhhhccChHHHHHHHHHHhCCCcHHHHHHHhhhh
Confidence 22111 123478899999999865 7999999999999999999999999888877665543222111
Q ss_pred ---------cCC-----------CCCCHHHHHHHHHhhhhCCCCCCCHHHHHHH
Q 003963 726 ---------EIP-----------KDVDPRWAAIVESCWHSDPQCRPSFQELVDK 759 (783)
Q Consensus 726 ---------~~~-----------~~~s~~l~~LI~~cL~~dP~~RPsa~ell~~ 759 (783)
+.| ..-..+...++..+|..||.+|.+..+.+.+
T Consensus 290 k~H~LR~~~k~Ps~~vLYtlsS~~~~~heav~~~~~~l~~d~dkris~~~A~~~ 343 (449)
T KOG0664|consen 290 KNHVLRAGLRAPDTQRLYKIASPDDKNHEAVDLLQKLLHFDPDKRISVEEALQH 343 (449)
T ss_pred HHHhhccCCCCCCccceeeecCCcccchHHHHHHHHHhCCCCcccccHhhhccc
Confidence 111 1122367888999999999999998888543
No 396
>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]
Probab=99.96 E-value=5.8e-30 Score=262.64 Aligned_cols=252 Identities=24% Similarity=0.328 Sum_probs=202.3
Q ss_pred ccceeEeeeeccCCcEEEEEEEEe-CCceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEeceeecCC------
Q 003963 504 WEDLTIGEQIGQGSCGTVYHAVWY-GSQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQ------ 576 (783)
Q Consensus 504 ~~~y~i~~~LG~G~fG~Vy~a~~~-~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~------ 576 (783)
..+|.-++.+|.|.- .|..+.+. .+++||+|++..........++..+|..++..+.|+||++++.+|.-..
T Consensus 16 ~~Ry~nL~p~~~g~~-~v~~a~D~v~~~~v~ikk~~~pf~n~~~akra~rel~l~~~v~~~nii~l~n~ftP~~~l~~~~ 94 (369)
T KOG0665|consen 16 PKRYVNLKPIGSGAQ-IVVAAFDQVLGRPVAIKKLSRPFQNQTHAKRAYRELKLMKCVNHKNIISLLNVFTPQKTLEEFQ 94 (369)
T ss_pred eeeeeeecccCCCCc-eEEecchhhccCceehhhhcCccccCccchhhhhhhhhhhhhcccceeeeeeccCccccHHHHH
Confidence 357888899999998 67777653 4578999998776444444567889999999999999999999987543
Q ss_pred ceEEEEEecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCccc
Q 003963 577 RLCIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLK 656 (783)
Q Consensus 577 ~~~lV~E~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~ 656 (783)
.+|+||||| ..+|...+. ..++..++..+..|++.|+.|||+.+ |+||||||+||+|..++.+||+|||+++..
T Consensus 95 e~y~v~e~m-~~nl~~vi~---~elDH~tis~i~yq~~~~ik~lhs~~--IihRdLkPsnivv~~~~~lKi~dfg~ar~e 168 (369)
T KOG0665|consen 95 EVYLVMELM-DANLCQVIL---MELDHETISYILYQMLCGIKHLHSAG--IIHRDLKPSNIVVNSDCTLKILDFGLARTE 168 (369)
T ss_pred hHHHHHHhh-hhHHHHHHH---HhcchHHHHHHHHHHHHHHHHHHhcc--eeecccCcccceecchhheeeccchhhccc
Confidence 479999999 559988886 34788899999999999999999999 999999999999999999999999999877
Q ss_pred ccccccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccccc------------
Q 003963 657 HETYLTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQR------------ 724 (783)
Q Consensus 657 ~~~~~~~~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~elltG~~Pf~~~~~~~~~~~i~~~~~~------------ 724 (783)
..... ....+.|..|+|||++.+..+...+||||+||++.||++|..-|.+.+.......+....+.
T Consensus 169 ~~~~~-mtpyVvtRyyrapevil~~~~ke~vdiwSvGci~gEli~~~Vlf~g~d~idQ~~ki~~~lgtpd~~F~~qL~~~ 247 (369)
T KOG0665|consen 169 DTDFM-MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELILGTVLFPGKDHIDQWNKIIEQLGTPDPSFMKQLQPT 247 (369)
T ss_pred Ccccc-cCchhheeeccCchheeccCCcccchhhhhhhHHHHHhhceEEecCchHHHHHHHHHHHhcCCCHHHHHHhhHH
Confidence 66533 33456799999999999999999999999999999999999999766543322211000000
Q ss_pred -------------cc----CCC-----------CCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhh
Q 003963 725 -------------LE----IPK-----------DVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQ 769 (783)
Q Consensus 725 -------------~~----~~~-----------~~s~~l~~LI~~cL~~dP~~RPsa~ell~~L~~L~~~~f~ 769 (783)
.. +|. .-...+++++.+||..+|++|.+++++ |+|||++
T Consensus 248 ~r~yv~~~~~y~~~~f~~~fpD~~f~~~~e~~~~~~~~ardll~~MLvi~pe~Risv~da------L~HPY~~ 314 (369)
T KOG0665|consen 248 VRNYVENRPQYQAISFSELFPDSLFPVVLEGSKLDCSLARDLLSKMLVIDPEKRISVDDA------LRHPYIK 314 (369)
T ss_pred HHHHhhcChHhhccchhhhCCcccccccccCCccchHHHHHHHHHhhccChhhcccHHHH------hcCCeee
Confidence 00 110 112357899999999999999999999 7899997
No 397
>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]
Probab=99.96 E-value=1.5e-30 Score=287.35 Aligned_cols=251 Identities=28% Similarity=0.430 Sum_probs=217.1
Q ss_pred ccccceeEeeeeccCCcEEEEEEEEeCC-ceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEeceeecCCceEE
Q 003963 502 ILWEDLTIGEQIGQGSCGTVYHAVWYGS-QDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCI 580 (783)
Q Consensus 502 ~~~~~y~i~~~LG~G~fG~Vy~a~~~~~-~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~l 580 (783)
...++|+++..||.|+||.||+++++.+ +..|+|+++.....+ ..-+.+|+-+++..+|||||.+++.+-..+.+++
T Consensus 12 nP~ddyellqrvgsgTygdvyKaRd~~s~elaavkvVkLep~dd--~~~iqqei~~~~dc~h~nivay~gsylr~dklwi 89 (829)
T KOG0576|consen 12 NPQDDYELLQRVGSGTYGDVYKARDKRSGELAAVKVVKLEPGDD--FSGIQQEIGMLRDCRHPNIVAYFGSYLRRDKLWI 89 (829)
T ss_pred CCccchhheeeecCCcccchhhhcccccCchhhheeeeccCCcc--ccccccceeeeecCCCcChHHHHhhhhhhcCcEE
Confidence 3457899999999999999999998654 668999998765432 4567789999999999999999999999999999
Q ss_pred EEEecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCccccccc
Q 003963 581 VTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETY 660 (783)
Q Consensus 581 V~E~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~ 660 (783)
+||||.||+|.++..- ..++++.++.+++++.++||+|||+.| =+|||||-.|||+++.|.|||+|||.+..+....
T Consensus 90 cMEycgggslQdiy~~-TgplselqiayvcRetl~gl~ylhs~g--k~hRdiKGanilltd~gDvklaDfgvsaqitati 166 (829)
T KOG0576|consen 90 CMEYCGGGSLQDIYHV-TGPLSELQIAYVCRETLQGLKYLHSQG--KIHRDIKGANILLTDEGDVKLADFGVSAQITATI 166 (829)
T ss_pred EEEecCCCcccceeee-cccchhHHHHHHHhhhhccchhhhcCC--cccccccccceeecccCceeecccCchhhhhhhh
Confidence 9999999999998765 457999999999999999999999998 7999999999999999999999999998877777
Q ss_pred ccccCCCCCCcccCcccc---cCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhcccc---cccCCCCCCHH
Q 003963 661 LTTKTGKGTPQWMAPEVL---RNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQ---RLEIPKDVDPR 734 (783)
Q Consensus 661 ~~~~~~~Gt~~Y~aPE~~---~~~~~s~~sDIwSLG~il~elltG~~Pf~~~~~~~~~~~i~~~~~---~~~~~~~~s~~ 734 (783)
.....+.||+.|||||+- +...|....|||++|++-.|+-.-++|.-+..+.+.+........ ..+-+..+++-
T Consensus 167 ~KrksfiGtpywmapEvaaverkggynqlcdiwa~gitAiel~eLqpplfdlhpmr~l~LmTkS~~qpp~lkDk~kws~~ 246 (829)
T KOG0576|consen 167 AKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWALGITAIELGELQPPLFDLHPMRALFLMTKSGFQPPTLKDKTKWSEF 246 (829)
T ss_pred hhhhcccCCccccchhHHHHHhcccccccccccccccchhhhhhcCCcccccchHHHHHHhhccCCCCCcccCCccchHH
Confidence 777788999999999985 345678899999999999999999999877777776655543332 23344568899
Q ss_pred HHHHHHHhhhhCCCCCCCHHHHH
Q 003963 735 WAAIVESCWHSDPQCRPSFQELV 757 (783)
Q Consensus 735 l~~LI~~cL~~dP~~RPsa~ell 757 (783)
+.+|++.||.++|++||++..+|
T Consensus 247 fh~fvK~altknpKkRptaeklL 269 (829)
T KOG0576|consen 247 FHNFVKGALTKNPKKRPTAEKLL 269 (829)
T ss_pred HHHHHHHHhcCCCccCCChhhhe
Confidence 99999999999999999998885
No 398
>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]
Probab=99.96 E-value=4.2e-30 Score=290.75 Aligned_cols=243 Identities=29% Similarity=0.455 Sum_probs=188.8
Q ss_pred EeeeeccCCcEE-EEEEEEeCCceEEEEEEecccCCHHHHHHHHHHHHHHHhCC-CCceeeEeceeecCCceEEEEEecC
Q 003963 509 IGEQIGQGSCGT-VYHAVWYGSQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLR-HPNVLLFMGAVTSPQRLCIVTEFLP 586 (783)
Q Consensus 509 i~~~LG~G~fG~-Vy~a~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~-HpnIv~l~~~~~~~~~~~lV~E~~~ 586 (783)
-.+.+|.|+.|+ ||+|... +++||||.+-. +....+.+|+.+|+.-+ |||||++|+.-.++..+||++|.|
T Consensus 513 ~~eilG~Gs~Gt~Vf~G~ye-~R~VAVKrll~-----e~~~~A~rEi~lL~eSD~H~NviRyyc~E~d~qF~YIalELC- 585 (903)
T KOG1027|consen 513 PKEILGYGSNGTVVFRGVYE-GREVAVKRLLE-----EFFDFAQREIQLLQESDEHPNVIRYYCSEQDRQFLYIALELC- 585 (903)
T ss_pred cHHHcccCCCCcEEEEEeeC-CceehHHHHhh-----HhHHHHHHHHHHHHhccCCCceEEEEeeccCCceEEEEehHh-
Confidence 345678988775 5778754 56999997643 33456778999999885 999999999999999999999999
Q ss_pred CCCHHHHHhhcCCcchH---HHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcC---C--CcEEEEecCCCccccc
Q 003963 587 RGSLFRLLQRNTTKLDW---RRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDK---H--WTVKVGDFGLSRLKHE 658 (783)
Q Consensus 587 ggsL~~~L~~~~~~l~~---~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~---~--~~vkL~DFGla~~~~~ 658 (783)
..+|.+++......... ...+.+..|+++||++||+.+ ||||||||.||||+. + ..++|+|||+++....
T Consensus 586 ~~sL~dlie~~~~d~~~~~~i~~~~~l~q~~~GlaHLHsl~--iVHRDLkPQNILI~~~~~~~~~ra~iSDfglsKkl~~ 663 (903)
T KOG1027|consen 586 ACSLQDLIESSGLDVEMQSDIDPISVLSQIASGLAHLHSLK--IVHRDLKPQNILISVPSADGTLRAKISDFGLSKKLAG 663 (903)
T ss_pred hhhHHHHHhccccchhhcccccHHHHHHHHHHHHHHHHhcc--cccccCCCceEEEEccCCCcceeEEecccccccccCC
Confidence 45999999864111111 344678889999999999999 999999999999975 2 4689999999987653
Q ss_pred c---cccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcC-CCCCCCCChHHHHHHhhcccc-cccCCCCCCH
Q 003963 659 T---YLTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATE-KIPWDNLNSMQVIGAVGFMNQ-RLEIPKDVDP 733 (783)
Q Consensus 659 ~---~~~~~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~elltG-~~Pf~~~~~~~~~~~i~~~~~-~~~~~~~~s~ 733 (783)
. ........||..|+|||++.....+.++|||||||++|+.++| ..||.+.-..+. +|...+. ...+......
T Consensus 664 ~~sS~~r~s~~sGt~GW~APE~L~~~~~~~avDiFslGCvfyYvltgG~HpFGd~~~R~~--NIl~~~~~L~~L~~~~d~ 741 (903)
T KOG1027|consen 664 GKSSFSRLSGGSGTSGWQAPEQLREDRKTQAVDIFSLGCVFYYVLTGGSHPFGDSLERQA--NILTGNYTLVHLEPLPDC 741 (903)
T ss_pred CcchhhcccCCCCcccccCHHHHhccccCcccchhhcCceEEEEecCCccCCCchHHhhh--hhhcCccceeeeccCchH
Confidence 3 2233456799999999999999888999999999999999996 999976543322 2211111 1122222333
Q ss_pred HHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHh
Q 003963 734 RWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYF 768 (783)
Q Consensus 734 ~l~~LI~~cL~~dP~~RPsa~ell~~L~~L~~~~f 768 (783)
++.+||.+|+.++|..||++.++ |.||||
T Consensus 742 eA~dLI~~ml~~dP~~RPsa~~V------L~HPlF 770 (903)
T KOG1027|consen 742 EAKDLISRMLNPDPQLRPSATDV------LNHPLF 770 (903)
T ss_pred HHHHHHHHhcCCCcccCCCHHHH------hCCCcc
Confidence 89999999999999999999999 667777
No 399
>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.96 E-value=3e-28 Score=250.54 Aligned_cols=258 Identities=19% Similarity=0.315 Sum_probs=216.9
Q ss_pred ccccceeEeeeeccCCcEEEEEEEE-eCCceEEEEEEecccCCHHHHHHHHHHHHHHHhCC-CCceeeEeceeecCCceE
Q 003963 502 ILWEDLTIGEQIGQGSCGTVYHAVW-YGSQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLR-HPNVLLFMGAVTSPQRLC 579 (783)
Q Consensus 502 ~~~~~y~i~~~LG~G~fG~Vy~a~~-~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~-HpnIv~l~~~~~~~~~~~ 579 (783)
+..-.|+|+++||+|+||+++.|.. ..+++||||.-...... -++..|.+.++.|. .++|...|-+..+..+-.
T Consensus 25 ~VG~hyrVGkKIGeGsFG~lf~G~Nl~nne~VAIKfEPrkS~A----PQLrdEYr~YKlL~g~~GIP~vYYFGqeG~~Ni 100 (449)
T KOG1165|consen 25 MVGPHYRVGKKIGEGSFGVLFLGKNLYNNEPVAIKFEPRKSEA----PQLRDEYRTYKLLGGTEGIPQVYYFGQEGKYNI 100 (449)
T ss_pred EecccceeccccccCcceeeecccccccCceEEEEeccccCCc----chHHHHHHHHHHHcCCCCCCceeeeccccchhh
Confidence 3445799999999999999999985 56789999986544322 35667889999885 699999999989888999
Q ss_pred EEEEecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcC-----CCcEEEEecCCCc
Q 003963 580 IVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDK-----HWTVKVGDFGLSR 654 (783)
Q Consensus 580 lV~E~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~-----~~~vkL~DFGla~ 654 (783)
||||++ |.+|.+++.-++.+++.+++..++.|++.-++|+|+++ +|+|||||+|+||.. ...|.|+|||+++
T Consensus 101 LVidLL-GPSLEDLFD~CgR~FSvKTV~miA~Qmi~rie~vH~k~--LIYRDIKPdNFLIGrp~~k~~n~IhiiDFGmAK 177 (449)
T KOG1165|consen 101 LVIDLL-GPSLEDLFDLCGRRFSVKTVAMIAKQMITRIEYVHEKD--LIYRDIKPDNFLIGRPGTKDANVIHIIDFGMAK 177 (449)
T ss_pred hhhhhh-CcCHHHHHHHhcCcccHHhHHHHHHHHHHHHHHHHhcc--eeecccCccceeecCCCCCCCceEEEEeccchh
Confidence 999999 88999999999999999999999999999999999998 999999999999964 3469999999998
Q ss_pred cccc-------ccccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHH---HHHHhhccccc
Q 003963 655 LKHE-------TYLTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQ---VIGAVGFMNQR 724 (783)
Q Consensus 655 ~~~~-------~~~~~~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~elltG~~Pf~~~~~~~---~~~~i~~~~~~ 724 (783)
.+.+ ++....+..||.+||+-....|...+.+.|+-|||-|++++|-|.+||+++.... .++.|......
T Consensus 178 ~YrDp~TkqHIPYrE~KSLsGTARYMSINTHlGrEQSRRDDLEaLGHvFmYFLRGsLPWQGLKA~tnK~kYeKIGe~Kr~ 257 (449)
T KOG1165|consen 178 EYRDPKTKQHIPYREHKSLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKADTNKEKYEKIGETKRS 257 (449)
T ss_pred hhcCccccccCccccccccccceeeeEeeccccchhhhhhhHHHhhhhhhhhccCCCccccccCcchHHHHHHhcccccc
Confidence 6543 3455666789999999999999999999999999999999999999999876543 33444322221
Q ss_pred ---ccCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHH
Q 003963 725 ---LEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQ 766 (783)
Q Consensus 725 ---~~~~~~~s~~l~~LI~~cL~~dP~~RPsa~ell~~L~~L~~~ 766 (783)
..+...+|.++..-+...-..+-.+-|.++-+...|.++.+.
T Consensus 258 T~i~~Lc~g~P~efa~Yl~yvR~L~F~E~PDYdylr~Lf~dvldr 302 (449)
T KOG1165|consen 258 TPIEVLCEGFPEEFATYLRYVRRLDFFETPDYDYLRKLFDDVLDR 302 (449)
T ss_pred CCHHHHHhcCHHHHHHHHHHHHhcCcccCCCHHHHHHHHHHHHHh
Confidence 224466889999999999999999999999998888877654
No 400
>cd00180 PKc Catalytic domain of Protein Kinases. Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which
Probab=99.96 E-value=6.8e-28 Score=241.62 Aligned_cols=211 Identities=39% Similarity=0.643 Sum_probs=185.4
Q ss_pred eccCCcEEEEEEEEeC-CceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEeceeecCCceEEEEEecCCCCHH
Q 003963 513 IGQGSCGTVYHAVWYG-SQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIVTEFLPRGSLF 591 (783)
Q Consensus 513 LG~G~fG~Vy~a~~~~-~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lV~E~~~ggsL~ 591 (783)
||.|.+|.||++.... ++++++|++....... ....+.+|+..++.+.|++|+++++++......+++|||+++++|.
T Consensus 1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~-~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~~~e~~~~~~l~ 79 (215)
T cd00180 1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSS-LLEELLREIEILKKLNHPNIVKLYGVFEDENHLYLVMEYCEGGSLK 79 (215)
T ss_pred CCcCCceEEEEEEecCCCcEEEEEEeccccchh-HHHHHHHHHHHHHhcCCCCeeeEeeeeecCCeEEEEEecCCCCcHH
Confidence 6899999999999865 6789999987665432 3467889999999999999999999999999999999999989999
Q ss_pred HHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcC-CCcEEEEecCCCcccccccccccCCCCCC
Q 003963 592 RLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDK-HWTVKVGDFGLSRLKHETYLTTKTGKGTP 670 (783)
Q Consensus 592 ~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~-~~~vkL~DFGla~~~~~~~~~~~~~~Gt~ 670 (783)
+++......++...++.++.+++.+|++||+.+ ++|+||+|.||+++. ++.++|+|||.+..............+..
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~--~~H~dl~~~ni~~~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~ 157 (215)
T cd00180 80 DLLKENEGKLSEDEILRILLQILEGLEYLHSNG--IIHRDLKPENILLDSDNGKVKLADFGLSKLLTSDKSLLKTIVGTP 157 (215)
T ss_pred HHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCC--eeccCCCHhhEEEeCCCCcEEEecCCceEEccCCcchhhcccCCC
Confidence 999865456889999999999999999999998 999999999999999 89999999999876654432233445788
Q ss_pred cccCcccccCC-CCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhcccccccCCCCCCHHHHHHHHHhhhhCCCC
Q 003963 671 QWMAPEVLRNE-PSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAAIVESCWHSDPQC 749 (783)
Q Consensus 671 ~Y~aPE~~~~~-~~s~~sDIwSLG~il~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~l~~LI~~cL~~dP~~ 749 (783)
.|++||.+... ..+.+.|+|+||+++++| ..+.+++..||..+|.+
T Consensus 158 ~~~~pe~~~~~~~~~~~~D~~~lg~~~~~l---------------------------------~~~~~~l~~~l~~~p~~ 204 (215)
T cd00180 158 AYMAPEVLLGKGYYSEKSDIWSLGVILYEL---------------------------------PELKDLIRKMLQKDPEK 204 (215)
T ss_pred CccChhHhcccCCCCchhhhHHHHHHHHHH---------------------------------HHHHHHHHHHhhCCccc
Confidence 99999999887 788999999999999999 67889999999999999
Q ss_pred CCCHHHHHHH
Q 003963 750 RPSFQELVDK 759 (783)
Q Consensus 750 RPsa~ell~~ 759 (783)
||++.++++.
T Consensus 205 R~~~~~l~~~ 214 (215)
T cd00180 205 RPSAKEILEH 214 (215)
T ss_pred CcCHHHHhhC
Confidence 9999999764
No 401
>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]
Probab=99.96 E-value=2.6e-29 Score=273.35 Aligned_cols=200 Identities=25% Similarity=0.418 Sum_probs=174.1
Q ss_pred ccceeEeeeeccCCcEEEEEEEEeCC-ceEEEEEEecccCCHH-H-----HHHHHHHHHHHHhCC---CCceeeEeceee
Q 003963 504 WEDLTIGEQIGQGSCGTVYHAVWYGS-QDVAVKVFSRQEYSDE-V-----IHSFRQEVSLMKRLR---HPNVLLFMGAVT 573 (783)
Q Consensus 504 ~~~y~i~~~LG~G~fG~Vy~a~~~~~-~~vAiK~i~~~~~~~~-~-----~~~~~~Ei~il~~l~---HpnIv~l~~~~~ 573 (783)
+.+|..++++|.|+||.|++|.++.+ ..|+||.+.+++.-.+ + +-.+-.|++||..|+ |+||++++++|+
T Consensus 560 ~s~yttlq~lG~GAyGkV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~NIlKlLdfFE 639 (772)
T KOG1152|consen 560 FSDYTTLQPLGEGAYGKVNLAIHKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHENILKLLDFFE 639 (772)
T ss_pred cccceeeeeccccccceEEEeeecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCccchhhhhheee
Confidence 56799999999999999999998765 5699999887654211 1 123556999999997 999999999999
Q ss_pred cCCceEEEEEec-CCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCC
Q 003963 574 SPQRLCIVTEFL-PRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGL 652 (783)
Q Consensus 574 ~~~~~~lV~E~~-~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGl 652 (783)
+++++||+||.. +|.+|++++..+ ..+++..+..|++|++.|+++||+.| |||||||-+||.|+.+|-+||+|||.
T Consensus 640 ddd~yyl~te~hg~gIDLFd~IE~k-p~m~E~eAk~IFkQV~agi~hlh~~~--ivhrdikdenvivd~~g~~klidfgs 716 (772)
T KOG1152|consen 640 DDDYYYLETEVHGEGIDLFDFIEFK-PRMDEPEAKLIFKQVVAGIKHLHDQG--IVHRDIKDENVIVDSNGFVKLIDFGS 716 (772)
T ss_pred cCCeeEEEecCCCCCcchhhhhhcc-CccchHHHHHHHHHHHhccccccccC--ceecccccccEEEecCCeEEEeeccc
Confidence 999999999976 456999999864 45999999999999999999999999 99999999999999999999999999
Q ss_pred CcccccccccccCCCCCCcccCcccccCCCC-CchhHHHHHHHHHHHHHcCCCCCCC
Q 003963 653 SRLKHETYLTTKTGKGTPQWMAPEVLRNEPS-DEKSDVYSFGVILWELATEKIPWDN 708 (783)
Q Consensus 653 a~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~-s~~sDIwSLG~il~elltG~~Pf~~ 708 (783)
+.+..... ...++||..|.|||++.|..| +..-|||+||++||-++....||.+
T Consensus 717 aa~~ksgp--fd~f~gtv~~aapevl~g~~y~gk~qdiwalgillytivykenpyyn 771 (772)
T KOG1152|consen 717 AAYTKSGP--FDVFVGTVDYAAPEVLGGEKYLGKPQDIWALGILLYTIVYKENPYYN 771 (772)
T ss_pred hhhhcCCC--cceeeeeccccchhhhCCCccCCCcchhhhhhheeeEEEeccCCCcC
Confidence 87665543 346789999999999999887 6778999999999999999999865
No 402
>smart00221 STYKc Protein kinase; unclassified specificity. Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.
Probab=99.95 E-value=1.6e-26 Score=236.20 Aligned_cols=199 Identities=36% Similarity=0.614 Sum_probs=172.9
Q ss_pred eeEeeeeccCCcEEEEEEEEeC-CceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEeceeecCCceEEEEEec
Q 003963 507 LTIGEQIGQGSCGTVYHAVWYG-SQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIVTEFL 585 (783)
Q Consensus 507 y~i~~~LG~G~fG~Vy~a~~~~-~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lV~E~~ 585 (783)
|.+.+.||.|++|.||++.+.. ++.+++|.+...... .....+.+|+..++.++|+|++++++++......++++||+
T Consensus 1 ~~~~~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~-~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~ 79 (225)
T smart00221 1 YELGKKLGEGAFGKVYLARDKGTGELVAVKVLKKEKTE-KQREEFLREIRILKKLKHPNIVKLYGVFEDPEPLYLVMEYC 79 (225)
T ss_pred CceeeEeecCCCeEEEEEEEcCCCcEEEEEeeccccch-HHHHHHHHHHHHHHhCCCCChhhheeeeecCCceEEEEecc
Confidence 5678999999999999999876 678999998765433 24578889999999999999999999999989999999999
Q ss_pred CCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCccccccc-cccc
Q 003963 586 PRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETY-LTTK 664 (783)
Q Consensus 586 ~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~-~~~~ 664 (783)
++++|.+++......+++..++.++.+++.+|.+||+++ ++|+||+|.||+++.++.++|+|||++....... ....
T Consensus 80 ~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~--i~h~di~~~ni~v~~~~~~~l~d~g~~~~~~~~~~~~~~ 157 (225)
T smart00221 80 EGGDLFDYLRKKGGKLSEEEARFYLRQILEALEYLHSLG--IVHRDLKPENILLGMDGLVKLADFGLARFIHRDLAALLK 157 (225)
T ss_pred CCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCC--eecCCCCHHHEEEcCCCCEEEeeCceeeEecCccccccc
Confidence 999999999765433788999999999999999999998 9999999999999999999999999987665432 1122
Q ss_pred CCCCCCcccCcccc-cCCCCCchhHHHHHHHHHHHHHcCCCCCCC
Q 003963 665 TGKGTPQWMAPEVL-RNEPSDEKSDVYSFGVILWELATEKIPWDN 708 (783)
Q Consensus 665 ~~~Gt~~Y~aPE~~-~~~~~s~~sDIwSLG~il~elltG~~Pf~~ 708 (783)
...++..|++||.+ ....++.++|+|+||+++++|++|+.||..
T Consensus 158 ~~~~~~~~~~pe~~~~~~~~~~~~Dv~~lG~~~~~l~~g~~pf~~ 202 (225)
T smart00221 158 TVKGTPFYLAPEVLLGGKGYGEAVDIWSLGVILYELLWGPEPFSG 202 (225)
T ss_pred ceeccCCcCCHhHhcCCCCCCchhhHHHHHHHHHHHHHCCCCccc
Confidence 34578889999998 666778899999999999999999999977
No 403
>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]
Probab=99.94 E-value=9.5e-28 Score=240.76 Aligned_cols=245 Identities=22% Similarity=0.335 Sum_probs=188.1
Q ss_pred ccceeEeeeeccCCcEEEEEEEEeCC-ceEEEEEEecccCCHHHHHHHHHHHHHHHhC-CCCceeeEec-eeecCCceEE
Q 003963 504 WEDLTIGEQIGQGSCGTVYHAVWYGS-QDVAVKVFSRQEYSDEVIHSFRQEVSLMKRL-RHPNVLLFMG-AVTSPQRLCI 580 (783)
Q Consensus 504 ~~~y~i~~~LG~G~fG~Vy~a~~~~~-~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l-~HpnIv~l~~-~~~~~~~~~l 580 (783)
.+.|.|.+.||+|.||.+-++.++++ ..+++|.+...... .+.|.+|..---.| .|.||+.-|+ .|+..+.+++
T Consensus 23 ~d~y~I~k~lgeG~FgkIlL~eHr~s~t~ivlKavp~p~tt---~~dF~rEfhY~~~Ls~H~hIi~tY~vaFqt~d~YvF 99 (378)
T KOG1345|consen 23 EDVYTINKQLGEGRFGKILLAEHRQSKTRIVLKAVPRPQTT---QADFVREFHYSFFLSPHQHIIDTYEVAFQTSDAYVF 99 (378)
T ss_pred hhhhhHHHHhcccceeeEEeeeccCCceEEEeeccCcchhh---HHHHHHHhccceeeccchhhhHHHHHHhhcCceEEE
Confidence 46799999999999999999999875 57999998776543 35677777654455 4899998776 5777889999
Q ss_pred EEEecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEc--CCCcEEEEecCCCccccc
Q 003963 581 VTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVD--KHWTVKVGDFGLSRLKHE 658 (783)
Q Consensus 581 V~E~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~--~~~~vkL~DFGla~~~~~ 658 (783)
++||++.|+|..-+...+ +-+.....++.|+++|+.|+|+.+ +||||||.+||||- +..+|||||||+.+..+.
T Consensus 100 ~qE~aP~gdL~snv~~~G--igE~~~K~v~~ql~SAi~fMHskn--lVHRdlK~eNiLif~~df~rvKlcDFG~t~k~g~ 175 (378)
T KOG1345|consen 100 VQEFAPRGDLRSNVEAAG--IGEANTKKVFAQLLSAIEFMHSKN--LVHRDLKAENILIFDADFYRVKLCDFGLTRKVGT 175 (378)
T ss_pred eeccCccchhhhhcCccc--ccHHHHHHHHHHHHHHHHHhhccc--hhhcccccceEEEecCCccEEEeeecccccccCc
Confidence 999999999999887544 778888999999999999999999 99999999999994 345899999999876554
Q ss_pred ccccccCCCCCCcccCcccccCCC-----CCchhHHHHHHHHHHHHHcCCCCCCCCChH--HHHHHhhcccc-cccCC--
Q 003963 659 TYLTTKTGKGTPQWMAPEVLRNEP-----SDEKSDVYSFGVILWELATEKIPWDNLNSM--QVIGAVGFMNQ-RLEIP-- 728 (783)
Q Consensus 659 ~~~~~~~~~Gt~~Y~aPE~~~~~~-----~s~~sDIwSLG~il~elltG~~Pf~~~~~~--~~~~~i~~~~~-~~~~~-- 728 (783)
.-. ....+..|.+||+..... ..+.+|||.||+++|.+|||.+||+..... .+.....+... .+..|
T Consensus 176 tV~---~~~~~~~y~~pe~~~~~~ne~~~~~ps~D~WqfGIi~f~cltG~~PWQka~~~d~~Y~~~~~w~~rk~~~~P~~ 252 (378)
T KOG1345|consen 176 TVK---YLEYVNNYHAPELCDTVVNEKLVVNPSTDIWQFGIIFFYCLTGKFPWQKASIMDKPYWEWEQWLKRKNPALPKK 252 (378)
T ss_pred eeh---hhhhhcccCCcHHHhhccccceEecccccchheeeeeeeeecCCCcchhhhccCchHHHHHHHhcccCccCchh
Confidence 322 222367799999865332 267899999999999999999999744221 12222222221 22333
Q ss_pred -CCCCHHHHHHHHHhhhhCCCCCCCHHHHHH
Q 003963 729 -KDVDPRWAAIVESCWHSDPQCRPSFQELVD 758 (783)
Q Consensus 729 -~~~s~~l~~LI~~cL~~dP~~RPsa~ell~ 758 (783)
..+++.+..+.++-|.+++++|.-..+..+
T Consensus 253 F~~fs~~a~r~Fkk~lt~~~~drcki~~~kk 283 (378)
T KOG1345|consen 253 FNPFSEKALRLFKKSLTPRFKDRCKIWTAKK 283 (378)
T ss_pred hcccCHHHHHHHHHhcCCcccccchhHHHHH
Confidence 457889999999999999999955444443
No 404
>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]
Probab=99.94 E-value=4.1e-27 Score=250.18 Aligned_cols=253 Identities=24% Similarity=0.381 Sum_probs=196.6
Q ss_pred cccccceeEeeeeccCCcEEEEEEEEeC----CceEEEEEEecccCCHHHHHHHHHHHHHHHhCC-CCceeeEeceeecC
Q 003963 501 EILWEDLTIGEQIGQGSCGTVYHAVWYG----SQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLR-HPNVLLFMGAVTSP 575 (783)
Q Consensus 501 e~~~~~y~i~~~LG~G~fG~Vy~a~~~~----~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~-HpnIv~l~~~~~~~ 575 (783)
..+.+.|.+.++||.|.|++||++.+.. .+.||+|.+...... .++..|+++|..+. +.||+++.+++..+
T Consensus 32 p~~~~~~~~v~kigeGsFssv~~a~~~~~~~~~~~valk~i~~ts~p----~ri~~El~~L~~~gG~~ni~~~~~~~rnn 107 (418)
T KOG1167|consen 32 PFISNAYKVVNKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRTSSP----SRILNELEMLYRLGGSDNIIKLNGCFRNN 107 (418)
T ss_pred hhhhhhhhhhccccccchhhhhhhhHhhhccccceEeeeecccccCc----hHHHHHHHHHHHhccchhhhcchhhhccC
Confidence 3456789999999999999999998654 456999998765543 35778999999995 89999999999999
Q ss_pred CceEEEEEecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcC-CCcEEEEecCCCc
Q 003963 576 QRLCIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDK-HWTVKVGDFGLSR 654 (783)
Q Consensus 576 ~~~~lV~E~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~-~~~vkL~DFGla~ 654 (783)
+.+++||||++.....+++.. ++...+..+++.++.||.++|.+| ||||||||.|||.+. .+.-.|+|||++.
T Consensus 108 d~v~ivlp~~~H~~f~~l~~~----l~~~~i~~Yl~~ll~Al~~~h~~G--IvHRDiKpsNFL~n~~t~rg~LvDFgLA~ 181 (418)
T KOG1167|consen 108 DQVAIVLPYFEHDRFRDLYRS----LSLAEIRWYLRNLLKALAHLHKNG--IVHRDIKPSNFLYNRRTQRGVLVDFGLAQ 181 (418)
T ss_pred CeeEEEecccCccCHHHHHhc----CCHHHHHHHHHHHHHHhhhhhccC--ccccCCCccccccccccCCceEEechhHH
Confidence 999999999999998888864 668889999999999999999999 999999999999985 4678999999986
Q ss_pred cccc---------------cc--------------------c---------cccCCCCCCcccCcccccCCC-CCchhHH
Q 003963 655 LKHE---------------TY--------------------L---------TTKTGKGTPQWMAPEVLRNEP-SDEKSDV 689 (783)
Q Consensus 655 ~~~~---------------~~--------------------~---------~~~~~~Gt~~Y~aPE~~~~~~-~s~~sDI 689 (783)
.... .. . ......||+.|+|||++...+ .+.++||
T Consensus 182 ~~d~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~p~g~~~~~~~~r~~~~anrAGT~GfRaPEvL~k~~~QttaiDi 261 (418)
T KOG1167|consen 182 RYDGYQQTEHSRSYSGRHATPAMGKDVHCQSVATASKPAGYYRRCNDGRPSERANRAGTPGFRAPEVLFRCPRQTTAIDI 261 (418)
T ss_pred HHHhhhhhhhhhhhhcccCCccccCcccccccccccCCCCceeccCCCccceecccCCCCCCCchHHHhhccCcCCccce
Confidence 1000 00 0 001124999999999987655 5889999
Q ss_pred HHHHHHHHHHHcCCCCCCCCCh-HHHHH------------Hhhccccc---------------------c----------
Q 003963 690 YSFGVILWELATEKIPWDNLNS-MQVIG------------AVGFMNQR---------------------L---------- 725 (783)
Q Consensus 690 wSLG~il~elltG~~Pf~~~~~-~~~~~------------~i~~~~~~---------------------~---------- 725 (783)
||.|++++.++++++||-.... ...+. ......+. .
T Consensus 262 ws~GVI~Lslls~~~PFf~a~dd~~al~ei~tifG~~~mrk~A~l~g~~~l~~ksn~~~~~e~~~~f~s~~~~~~~~~~q 341 (418)
T KOG1167|consen 262 WSAGVILLSLLSRRYPFFKAKDDADALAEIATIFGSAEMRKCAALPGRILLWQKSNIPTIPELRVNFETLHIESIYKSRQ 341 (418)
T ss_pred eeccceeehhhccccccccCccccchHHHHHHHhChHHHHHHhhcCCceeeeccccccccHHHHhchhccChhhcccccc
Confidence 9999999999999999832211 11000 00000000 0
Q ss_pred ------cCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhh
Q 003963 726 ------EIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQ 769 (783)
Q Consensus 726 ------~~~~~~s~~l~~LI~~cL~~dP~~RPsa~ell~~L~~L~~~~f~ 769 (783)
......+..+.+|+.+||..||.+|.|+++. |+|+||.
T Consensus 342 ~n~~~~~~~d~~~~~~~dlLdk~le~np~kRitAEeA------LkHpFF~ 385 (418)
T KOG1167|consen 342 PNTEREIGSDVFPALLLDLLDKCLELNPQKRITAEDA------LKHPFFD 385 (418)
T ss_pred cceeeccccccccHHHHHHHHHHccCChhhcccHHHH------hcCcCCc
Confidence 0001234578999999999999999999999 7889985
No 405
>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.93 E-value=1.5e-25 Score=221.64 Aligned_cols=258 Identities=20% Similarity=0.294 Sum_probs=212.5
Q ss_pred cccccceeEeeeeccCCcEEEEEEEEeC-CceEEEEEEecccCCHHHHHHHHHHHHHHHhCCC-CceeeEeceeecCCce
Q 003963 501 EILWEDLTIGEQIGQGSCGTVYHAVWYG-SQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRH-PNVLLFMGAVTSPQRL 578 (783)
Q Consensus 501 e~~~~~y~i~~~LG~G~fG~Vy~a~~~~-~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~H-pnIv~l~~~~~~~~~~ 578 (783)
.+....|.++++||+|+||.+|.+.... +.+||||+-+.....+ .+..|..++..|++ ..|..+..++.+..+-
T Consensus 11 ~iv~gky~lvrkiGsGSFGdIy~~~~i~~ge~VAiK~Es~~a~hp----qL~yEskvY~iL~~g~GiP~i~~y~~e~~yn 86 (341)
T KOG1163|consen 11 LIVGGKYKLVRKIGSGSFGDIYLGISITSGEEVAIKLESSKAKHP----QLLYESKVYRILQGGVGIPHIRHYGTEKDYN 86 (341)
T ss_pred heeccceEEEEeecCCchhheeeeeeccCCceEEEEeecccCCCc----chhHHHHHHHHhccCCCCchhhhhccccccc
Confidence 4567899999999999999999998754 5789999976554332 45678999999975 6788888888888899
Q ss_pred EEEEEecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcC---CCcEEEEecCCCcc
Q 003963 579 CIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDK---HWTVKVGDFGLSRL 655 (783)
Q Consensus 579 ~lV~E~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~---~~~vkL~DFGla~~ 655 (783)
.+||+++ |.+|.+++.-+...++..+++-++-|++.-++|+|.++ +|||||||+|+|+.- ...+.|+|||+|+.
T Consensus 87 vlVMdLL-GPsLEdLfnfC~R~ftmkTvLMLaDQml~RiEyvH~r~--fiHRDIKPdNFLMGlgrh~~kl~LIDFGLaKk 163 (341)
T KOG1163|consen 87 VLVMDLL-GPSLEDLFNFCSRRFTMKTVLMLADQMLSRIEYVHLRN--FIHRDIKPDNFLMGLGRHCNKLYLIDFGLAKK 163 (341)
T ss_pred eeeeecc-CccHHHHHHHHhhhhhHHhHHHHHHHHHHHHHHHHhhc--cccccCCccceeeccccccceEEEEeccchhh
Confidence 9999999 88999999888888999999999999999999999998 999999999999963 34699999999986
Q ss_pred ccc-------ccccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHH---HHHHhhcccc--
Q 003963 656 KHE-------TYLTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQ---VIGAVGFMNQ-- 723 (783)
Q Consensus 656 ~~~-------~~~~~~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~elltG~~Pf~~~~~~~---~~~~i~~~~~-- 723 (783)
+.+ ++.......||.+|.+-....+...+.+.|+-|+|++|.++.-|.+||++..... .++.|....-
T Consensus 164 y~d~~t~~HIpyre~r~ltGTaRYASinAh~g~eqSRRDDmeSvgYvLmYfnrG~LPWQglka~tk~QKyEkI~EkK~s~ 243 (341)
T KOG1163|consen 164 YRDIRTRQHIPYREDRNLTGTARYASINAHLGIEQSRRDDMESVGYVLMYFNRGSLPWQGLKAATKKQKYEKISEKKMST 243 (341)
T ss_pred hccccccccCccccCCccceeeeehhhhhhhhhhhhhhhhhhhhcceeeeeecCCCcccccchhhHHHHHHHHHHhhcCC
Confidence 543 3344455679999999999999999999999999999999999999999886543 3333322111
Q ss_pred -cccCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHH
Q 003963 724 -RLEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQR 765 (783)
Q Consensus 724 -~~~~~~~~s~~l~~LI~~cL~~dP~~RPsa~ell~~L~~L~~ 765 (783)
.-.+...+|.++.-.+..|-..--++-|.+.-+-+.++-|..
T Consensus 244 ~ie~LC~G~P~EF~myl~Y~R~L~F~E~Pdy~ylrqlFriLfr 286 (341)
T KOG1163|consen 244 PIEVLCKGFPAEFAMYLNYCRGLGFEEKPDYMYLRQLFRILFR 286 (341)
T ss_pred CHHHHhCCCcHHHHHHHHHHhhcCCCCCCcHHHHHHHHHHHHh
Confidence 112446788999999999999999999999888777665533
No 406
>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.93 E-value=6.3e-25 Score=239.75 Aligned_cols=256 Identities=22% Similarity=0.310 Sum_probs=203.1
Q ss_pred ceeEeeeeccCCcEEEEEEEEeCC--ceEEEEEEecccCCHHHHHHHHHHHHHHHhCCC----CceeeEecee-ecCCce
Q 003963 506 DLTIGEQIGQGSCGTVYHAVWYGS--QDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRH----PNVLLFMGAV-TSPQRL 578 (783)
Q Consensus 506 ~y~i~~~LG~G~fG~Vy~a~~~~~--~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~H----pnIv~l~~~~-~~~~~~ 578 (783)
+|++.++||+|+||.||+|.+... ..+|+|+......... ..+..|+.++..+.. .++..+++.+ ..+...
T Consensus 19 ~~~i~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~~~--~~l~~E~~vl~~l~~~~~~~~~~~~~~~G~~~~~~~ 96 (322)
T KOG1164|consen 19 RYKLGKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELGSKP--SVLKIEIQVLKKLEKKNGPSHFPKLLDHGRSTEDFN 96 (322)
T ss_pred ceEEeeeccccCCceEEEEEecCCCCeeEEEEEEEecccCCC--ccchhHHHHHHHHhhhcCCCCCCEEEEeccCCCcee
Confidence 899999999999999999998664 4789998766432221 146678888888863 6889999988 577889
Q ss_pred EEEEEecCCCCHHHHHhhcC-CcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCC-----CcEEEEecCC
Q 003963 579 CIVTEFLPRGSLFRLLQRNT-TKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKH-----WTVKVGDFGL 652 (783)
Q Consensus 579 ~lV~E~~~ggsL~~~L~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~-----~~vkL~DFGl 652 (783)
||||+.+ |.+|.++..... ..++..+++.++.|++.+|.+||+.| ++||||||.|+++... ..+.|.|||+
T Consensus 97 ~iVM~l~-G~sL~dl~~~~~~~~fs~~T~l~ia~q~l~~l~~lH~~G--~iHRDiKp~N~~~g~~~~~~~~~~~llDfGl 173 (322)
T KOG1164|consen 97 FIVMSLL-GPSLEDLRKRNPPGRFSRKTVLRIAIQNLNALEDLHSKG--FIHRDIKPENFVVGQSSRSEVRTLYLLDFGL 173 (322)
T ss_pred EEEEecc-CccHHHHHHhCCCCCcCHhHHHHHHHHHHHHHHHHHhcC--cccCCcCHHHeeecCCCCcccceEEEEecCC
Confidence 9999999 889999986555 77999999999999999999999999 9999999999999865 4699999999
Q ss_pred Cc--cccccc-------cc-ccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccc
Q 003963 653 SR--LKHETY-------LT-TKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMN 722 (783)
Q Consensus 653 a~--~~~~~~-------~~-~~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~elltG~~Pf~~~~~~~~~~~i~~~~ 722 (783)
++ ...... .. .....||..|+++.+..+...+++.|+|||++++.+|+.|.+||...........+....
T Consensus 174 ar~~~~~~~~~~~~~~~r~~~~~~rGT~ry~S~~~H~~~e~~r~DDles~~Y~l~el~~g~LPW~~~~~~~~~~~~~~~~ 253 (322)
T KOG1164|consen 174 ARRFKYVGDSGGNLRPPRPQKGLFRGTLRYASINVHLGIEQGRRDDLESLFYMLLELLKGSLPWEALEMTDLKSKFEKDP 253 (322)
T ss_pred CccccccCCCCcccccCCCCccCCCCccccccHHHhCCCccCCchhhhhHHHHHHHHhcCCCCCccccccchHHHHHHHh
Confidence 98 321111 11 123459999999999999999999999999999999999999998776432222221111
Q ss_pred cccc---CCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHH
Q 003963 723 QRLE---IPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQ 766 (783)
Q Consensus 723 ~~~~---~~~~~s~~l~~LI~~cL~~dP~~RPsa~ell~~L~~L~~~ 766 (783)
.... .....+.++..+...+-..+...+|.+..+...|..+...
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pdy~~~~~~l~~~~~~ 300 (322)
T KOG1164|consen 254 RKLLTDRFGDLKPEEFAKILEYIDSLDYEDKPDYEKLAELLKDVFDS 300 (322)
T ss_pred hhhccccccCCChHHHHHHHHHhhccCCcCCCCHHHHHHHHHHHHHh
Confidence 1111 3345667888888888889999999999998886655443
No 407
>PLN00181 protein SPA1-RELATED; Provisional
Probab=99.93 E-value=1.6e-26 Score=281.27 Aligned_cols=202 Identities=22% Similarity=0.245 Sum_probs=148.1
Q ss_pred HhCCC-CceeeEecee-------ecCCceEEEEEecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEe
Q 003963 558 KRLRH-PNVLLFMGAV-------TSPQRLCIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIH 629 (783)
Q Consensus 558 ~~l~H-pnIv~l~~~~-------~~~~~~~lV~E~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvH 629 (783)
+.+.| +||++++++| .....++++|||+ +++|.++|......+++..++.++.||++||+|||++| |||
T Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~-~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~g--IvH 103 (793)
T PLN00181 27 KSLSHIDYVRSLLGSHKEGNLDGLDDDSIVRALECE-DVSLRQWLDNPDRSVDAFECFHVFRQIVEIVNAAHSQG--IVV 103 (793)
T ss_pred chhhHHHHHHHhhcccCCccccccccchhhhhhccC-CccHHHHHhcccccccHHHHHHHHHHHHHHHHHHHhCC--eee
Confidence 34555 5888888877 2334678889988 66999999765667999999999999999999999998 999
Q ss_pred cCCCCCCEEEcCCC-------------------cEEEEecCCCccccccc----------------ccccCCCCCCcccC
Q 003963 630 RDLKSSNLLVDKHW-------------------TVKVGDFGLSRLKHETY----------------LTTKTGKGTPQWMA 674 (783)
Q Consensus 630 rDIKp~NILl~~~~-------------------~vkL~DFGla~~~~~~~----------------~~~~~~~Gt~~Y~a 674 (783)
|||||+||||+..+ .+||+|||+++...... ......+||+.|||
T Consensus 104 rDlKP~NiLl~~~~~~k~~d~~~~~~~~~~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~A 183 (793)
T PLN00181 104 HNVRPSCFVMSSFNHVSFIESASCSDSGSDEDATTKSREIGSSRREEILSERRIEKLEEVKKQPFPMKQILAMEMSWYTS 183 (793)
T ss_pred ccCCchhEEEcccCcEEEeeccccCcccccccCcccccccccccccccccccchhhhhccccCCCcccccccCCCcceEC
Confidence 99999999996544 45555666554321100 00112357899999
Q ss_pred cccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhcccccccCCCCCCHHHHHHHHHhhhhCCCCCCCHH
Q 003963 675 PEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAAIVESCWHSDPQCRPSFQ 754 (783)
Q Consensus 675 PE~~~~~~~s~~sDIwSLG~il~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~l~~LI~~cL~~dP~~RPsa~ 754 (783)
||++.+..++.++|||||||+||||++|.+|+..... ....+.... .+.......+....++.+||.++|.+||++.
T Consensus 184 PE~~~~~~~~~~sDVwSlGviL~ELl~~~~~~~~~~~--~~~~~~~~~-~~~~~~~~~~~~~~~~~~~L~~~P~~Rps~~ 260 (793)
T PLN00181 184 PEEDNGSSSNCASDVYRLGVLLFELFCPVSSREEKSR--TMSSLRHRV-LPPQILLNWPKEASFCLWLLHPEPSCRPSMS 260 (793)
T ss_pred hhhhccCCCCchhhhhhHHHHHHHHhhCCCchhhHHH--HHHHHHHhh-cChhhhhcCHHHHHHHHHhCCCChhhCcChH
Confidence 9999999999999999999999999999988764321 111111111 1111112245678899999999999999999
Q ss_pred HHHHHHHHHHHHHhhcC
Q 003963 755 ELVDKLRDLQRQYFQAS 771 (783)
Q Consensus 755 ell~~L~~L~~~~f~~~ 771 (783)
++ ++|+||+..
T Consensus 261 ei------l~h~~~~~~ 271 (793)
T PLN00181 261 EL------LQSEFINEP 271 (793)
T ss_pred HH------hhchhhhhh
Confidence 99 567887653
No 408
>smart00750 KIND kinase non-catalytic C-lobe domain. It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features
Probab=99.92 E-value=6.6e-25 Score=217.39 Aligned_cols=163 Identities=23% Similarity=0.318 Sum_probs=129.6
Q ss_pred CCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCcccccccccccCCC
Q 003963 588 GSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETYLTTKTGK 667 (783)
Q Consensus 588 gsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~~ 667 (783)
|+|.+++......+++..++.++.||+.||.|||+.+ ||+|||++.++.+|+ ||++...... ...
T Consensus 1 GsL~~~l~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~--------kp~Nil~~~~~~~~~--fG~~~~~~~~-----~~~ 65 (176)
T smart00750 1 VSLADILEVRGRPLNEEEIWAVCLQCLRALRELHRQA--------KSGNILLTWDGLLKL--DGSVAFKTPE-----QSR 65 (176)
T ss_pred CcHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhcC--------CcccEeEcCccceee--ccceEeeccc-----cCC
Confidence 6899999876677999999999999999999999875 999999999999999 9998765432 236
Q ss_pred CCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChH-HHHHHhhcccccc-----cCCCCCCH--HHHHHH
Q 003963 668 GTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSM-QVIGAVGFMNQRL-----EIPKDVDP--RWAAIV 739 (783)
Q Consensus 668 Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~elltG~~Pf~~~~~~-~~~~~i~~~~~~~-----~~~~~~s~--~l~~LI 739 (783)
||+.|||||++.+..++.++|||||||++|||++|..||...... ..+..+....... ..+..++. ++.++|
T Consensus 66 g~~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 145 (176)
T smart00750 66 VDPYFMAPEVIQGQSYTEKADIYSLGITLYEALDYELPYNEERELSAILEILLNGMPADDPRDRSNLESVSAARSFADFM 145 (176)
T ss_pred CcccccChHHhcCCCCcchhhHHHHHHHHHHHHhCCCCccccchhcHHHHHHHHHhccCCccccccHHHHHhhhhHHHHH
Confidence 899999999999999999999999999999999999999765432 2222221110111 11222333 699999
Q ss_pred HHhhhhCCCCCCCHHHHHHHHHHHHH
Q 003963 740 ESCWHSDPQCRPSFQELVDKLRDLQR 765 (783)
Q Consensus 740 ~~cL~~dP~~RPsa~ell~~L~~L~~ 765 (783)
.+||..+|.+||++.++++++..+..
T Consensus 146 ~~cl~~~p~~Rp~~~~ll~~~~~~~~ 171 (176)
T smart00750 146 RVCASRLPQRREAANHYLAHCRALFA 171 (176)
T ss_pred HHHHhcccccccCHHHHHHHHHHHHH
Confidence 99999999999999999887765543
No 409
>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]
Probab=99.91 E-value=1.2e-22 Score=215.77 Aligned_cols=249 Identities=29% Similarity=0.444 Sum_probs=203.7
Q ss_pred eeEeeeeccCCcEEEEEEEEeCCceEEEEEEecccCCHH-HHHHHHHHHHHHHhCCCC-ceeeEeceeecCCceEEEEEe
Q 003963 507 LTIGEQIGQGSCGTVYHAVWYGSQDVAVKVFSRQEYSDE-VIHSFRQEVSLMKRLRHP-NVLLFMGAVTSPQRLCIVTEF 584 (783)
Q Consensus 507 y~i~~~LG~G~fG~Vy~a~~~~~~~vAiK~i~~~~~~~~-~~~~~~~Ei~il~~l~Hp-nIv~l~~~~~~~~~~~lV~E~ 584 (783)
|.+.+.||.|+||.||++.+. ..+++|.+........ ....+.+|+.++..+.|+ +|+++++.+......+++++|
T Consensus 2 ~~~~~~l~~g~~~~v~~~~~~--~~~~~k~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 79 (384)
T COG0515 2 YRILRKLGEGSFGEVYLARDR--KLVALKVLAKKLESKSKEVERFLREIQILASLNHPPNIVKLYDFFQDEGSLYLVMEY 79 (384)
T ss_pred ceeEEeecCCCCeEEEEEEec--cEEEEEeechhhccchhHHHHHHHHHHHHHHccCCcceeeEEEEEecCCEEEEEEec
Confidence 788899999999999999977 6899999887665443 567899999999999988 799999999877778999999
Q ss_pred cCCCCHHHHHhhcC--CcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCC-cEEEEecCCCcccccccc
Q 003963 585 LPRGSLFRLLQRNT--TKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHW-TVKVGDFGLSRLKHETYL 661 (783)
Q Consensus 585 ~~ggsL~~~L~~~~--~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~-~vkL~DFGla~~~~~~~~ 661 (783)
+.+++|.+++.... ..+.......++.|++.++.|+|+.+ ++||||||+||+++..+ .++++|||++........
T Consensus 80 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~H~~~--~~hrd~kp~nil~~~~~~~~~l~dfg~~~~~~~~~~ 157 (384)
T COG0515 80 VDGGSLEDLLKKIGRKGPLSESEALFILAQILSALEYLHSKG--IIHRDIKPENILLDRDGRVVKLIDFGLAKLLPDPGS 157 (384)
T ss_pred CCCCcHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHHhCC--eeccCCCHHHeeecCCCCeEEEeccCcceecCCCCc
Confidence 99999997776544 26889999999999999999999999 99999999999999988 799999999875544321
Q ss_pred ------cccCCCCCCcccCcccccC---CCCCchhHHHHHHHHHHHHHcCCCCCCCCCh----HHHHHHhhccccc-cc-
Q 003963 662 ------TTKTGKGTPQWMAPEVLRN---EPSDEKSDVYSFGVILWELATEKIPWDNLNS----MQVIGAVGFMNQR-LE- 726 (783)
Q Consensus 662 ------~~~~~~Gt~~Y~aPE~~~~---~~~s~~sDIwSLG~il~elltG~~Pf~~~~~----~~~~~~i~~~~~~-~~- 726 (783)
......|+..|++||.+.+ ...+...|+|++|++++++++|..||..... ......+...... ..
T Consensus 158 ~~~~~~~~~~~~~t~~~~~pe~~~~~~~~~~~~~~D~~s~g~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (384)
T COG0515 158 TSSIPALPSTSVGTPGYMAPEVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNSSATSQTLKIILELPTPSLAS 237 (384)
T ss_pred cccccccccccccccccCCHHHhcCCCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCccccHHHHHHHHHhcCCccccc
Confidence 2356679999999999988 5788999999999999999999999877653 3333333222211 11
Q ss_pred -CCCCC----CHHHHHHHHHhhhhCCCCCCCHHHHHHH
Q 003963 727 -IPKDV----DPRWAAIVESCWHSDPQCRPSFQELVDK 759 (783)
Q Consensus 727 -~~~~~----s~~l~~LI~~cL~~dP~~RPsa~ell~~ 759 (783)
..... ...+.+++..|+..+|..|.+.......
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 275 (384)
T COG0515 238 PLSPSNPELISKAASDLLKKLLAKDPKNRLSSSSDLSH 275 (384)
T ss_pred ccCccccchhhHHHHHHHHHHHhcCchhcCCHHHHhhc
Confidence 11111 2578999999999999999998887554
No 410
>PRK09188 serine/threonine protein kinase; Provisional
Probab=99.89 E-value=7.6e-23 Score=224.24 Aligned_cols=168 Identities=18% Similarity=0.140 Sum_probs=130.4
Q ss_pred cccccceeEeeeeccCCcEEEEEEEEeC--CceEEEEEEecccC---CHHHHHHHHHHHHHHHhCCCCceee-Eeceeec
Q 003963 501 EILWEDLTIGEQIGQGSCGTVYHAVWYG--SQDVAVKVFSRQEY---SDEVIHSFRQEVSLMKRLRHPNVLL-FMGAVTS 574 (783)
Q Consensus 501 e~~~~~y~i~~~LG~G~fG~Vy~a~~~~--~~~vAiK~i~~~~~---~~~~~~~~~~Ei~il~~l~HpnIv~-l~~~~~~ 574 (783)
.....+|.+.+.||+|+||+||+|.+.. ++.||||++..... .......+.+|+.+|+.++|+||+. ++++
T Consensus 14 ~~~~~~Y~~~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~h~~iv~~l~~~--- 90 (365)
T PRK09188 14 PALSARFVETAVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVRGIGVVPQLLAT--- 90 (365)
T ss_pred ccccCCceEccEEeecCcEEEEEEEEcCCCCeEEEEEEecccccccccHHHHHHHHHHHHHHHhccCCCCCcEEEEc---
Confidence 4556789999999999999999998753 45679998753311 2344567999999999999999984 5442
Q ss_pred CCceEEEEEecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCC-CCCCEEEcCCCcEEEEecCCC
Q 003963 575 PQRLCIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDL-KSSNLLVDKHWTVKVGDFGLS 653 (783)
Q Consensus 575 ~~~~~lV~E~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDI-Kp~NILl~~~~~vkL~DFGla 653 (783)
+..|+|||||+|++|... .. .. ...++.+++++|.|||++| |+|||| ||+|||++.++.+||+|||++
T Consensus 91 -~~~~LVmE~~~G~~L~~~-~~----~~---~~~~~~~i~~aL~~lH~~g--IiHrDL~KP~NILv~~~~~ikLiDFGlA 159 (365)
T PRK09188 91 -GKDGLVRGWTEGVPLHLA-RP----HG---DPAWFRSAHRALRDLHRAG--ITHNDLAKPQNWLMGPDGEAAVIDFQLA 159 (365)
T ss_pred -CCcEEEEEccCCCCHHHh-Cc----cc---hHHHHHHHHHHHHHHHHCC--CeeCCCCCcceEEEcCCCCEEEEECccc
Confidence 457999999999999732 11 11 1456789999999999998 999999 999999999999999999999
Q ss_pred cccccccc--------cccCCCCCCcccCcccccCCC
Q 003963 654 RLKHETYL--------TTKTGKGTPQWMAPEVLRNEP 682 (783)
Q Consensus 654 ~~~~~~~~--------~~~~~~Gt~~Y~aPE~~~~~~ 682 (783)
+....... ...+.++++.|++||.+....
T Consensus 160 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~pe~~~~~~ 196 (365)
T PRK09188 160 SVFRRRGALYRIAAYEDLRHLLKHKRTYAPDALTPRE 196 (365)
T ss_pred eecccCcchhhhhhhhhhhhhhccCccCCcccCChhh
Confidence 86543321 112446788899999986543
No 411
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.89 E-value=5.8e-24 Score=247.43 Aligned_cols=260 Identities=24% Similarity=0.340 Sum_probs=200.8
Q ss_pred eEeeeeccCCcEEEEEEEEeCC-ceEEEEEEe----cccCCHHHHHHHHHHHHHHHhCCCCceeeEeceeecCCceEEEE
Q 003963 508 TIGEQIGQGSCGTVYHAVWYGS-QDVAVKVFS----RQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIVT 582 (783)
Q Consensus 508 ~i~~~LG~G~fG~Vy~a~~~~~-~~vAiK~i~----~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lV~ 582 (783)
.....+|.|++|.|+.+..... ..++.|.+. ...........+..|+.+-..+.|||++..+..+.......-.|
T Consensus 321 ~~~~~~g~ga~g~~~~~~~~~~~~~~~~~~~r~~~~~~~s~~~~~~~i~sE~~i~~~l~h~~~~e~l~~~~~~~~~~~~m 400 (601)
T KOG0590|consen 321 KPGRVLGSGAYGSVRIAKRRSDLKSFPEKEFRVRVKPTESERKYNYNITSEFCIGSSLSHPNIIETLDIVQEIDGILQSM 400 (601)
T ss_pred CccceeeecccCceEEEEecCCCccchhhhhhcccCCcccHHHHhhhhhhheeecccccCCchhhhHHHHhhcccchhhh
Confidence 3457799999998888765432 224444332 22222233333667777888889999998888877766666669
Q ss_pred EecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCcccccccc-
Q 003963 583 EFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETYL- 661 (783)
Q Consensus 583 E~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~~- 661 (783)
|||++ +|+.++... ..+....+-.++.|++.||.|||..| |.|||+|++|++++.+|.+||+|||.+........
T Consensus 401 E~~~~-Dlf~~~~~~-~~~~~~e~~c~fKqL~~Gv~y~h~~G--iahrdlK~enll~~~~g~lki~Dfg~~~vf~~~~e~ 476 (601)
T KOG0590|consen 401 EYCPY-DLFSLVMSN-GKLTPLEADCFFKQLLRGVKYLHSMG--LAHRDLKLENLLVTENGILKIIDFGAASVFRYPWEK 476 (601)
T ss_pred hcccH-HHHHHHhcc-cccchhhhhHHHHHHHHHHHHHHhcC--ceeccCccccEEEecCCceEEeecCcceeeccCcch
Confidence 99999 999999864 35888899999999999999999999 99999999999999999999999999876654433
Q ss_pred ---cccCCCCCCcccCcccccCCCCCc-hhHHHHHHHHHHHHHcCCCCCCCCChHHHH--HHh-----hcccccccCCCC
Q 003963 662 ---TTKTGKGTPQWMAPEVLRNEPSDE-KSDVYSFGVILWELATEKIPWDNLNSMQVI--GAV-----GFMNQRLEIPKD 730 (783)
Q Consensus 662 ---~~~~~~Gt~~Y~aPE~~~~~~~s~-~sDIwSLG~il~elltG~~Pf~~~~~~~~~--~~i-----~~~~~~~~~~~~ 730 (783)
.....+|+..|+|||++.+..|++ ..||||.|++++.|.+|+.||......+.. ... ........+...
T Consensus 477 ~~~~~~g~~gS~pY~apE~~~~~~ydpr~vDiwS~~ii~~~m~~~~~~Wk~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 556 (601)
T KOG0590|consen 477 NIHESSGIVGSDPYLAPEVLTGKEYDPRAVDVWSCGIIYICMILGRFPWKVAKKSDNSFKTNNYSDQRNIFEGPNRLLSL 556 (601)
T ss_pred hhhhhcCcccCCcCcCcccccccccCcchhhhhhccceEEEEecCCCccccccccccchhhhccccccccccChHHHHHh
Confidence 344568999999999999999865 689999999999999999999655433221 111 111122334456
Q ss_pred CCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhcCcCCCCC
Q 003963 731 VDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQASRSTVGD 777 (783)
Q Consensus 731 ~s~~l~~LI~~cL~~dP~~RPsa~ell~~L~~L~~~~f~~~~~~~~~ 777 (783)
++...+.+|.+||+.+|.+|.|+.+| ++.+||+.+.+-.-+
T Consensus 557 lp~~~~~~~~~~l~~~P~~R~ti~~i------~~d~W~~~i~~c~v~ 597 (601)
T KOG0590|consen 557 LPRETRIIIYRMLQLDPTKRITIEQI------LNDEWIRSIECCHVD 597 (601)
T ss_pred chhhHHHHHHHHccCChhheecHHHH------hhChHhhhcceEEec
Confidence 78889999999999999999999999 789999998775443
No 412
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=99.89 E-value=2.3e-23 Score=208.96 Aligned_cols=252 Identities=29% Similarity=0.626 Sum_probs=209.5
Q ss_pred cceeEeeeeccCCcEEEEEEEEeCCceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEeceeecCCceEEEEEe
Q 003963 505 EDLTIGEQIGQGSCGTVYHAVWYGSQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIVTEF 584 (783)
Q Consensus 505 ~~y~i~~~LG~G~fG~Vy~a~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lV~E~ 584 (783)
.++.+..+|.+.-.|..|+|+++++ .+++|++............|..|.-.|+.+.||||+.+++.|..+..+.++..|
T Consensus 190 ~~lnl~tkl~e~hsgelwrgrwqgn-divakil~vr~~t~risrdfneefp~lrifshpnilpvlgacnsppnlv~isq~ 268 (448)
T KOG0195|consen 190 SSLNLITKLAESHSGELWRGRWQGN-DIVAKILNVREVTARISRDFNEEFPALRIFSHPNILPVLGACNSPPNLVIISQY 268 (448)
T ss_pred hhhhhhhhhccCCCcccccccccCc-chhhhhhhhhhcchhhcchhhhhCcceeeecCCchhhhhhhccCCCCceEeeee
Confidence 3445567788999999999999876 677888877666666667888899999999999999999999999999999999
Q ss_pred cCCCCHHHHHhhc-CCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEE--ecCCCcccccccc
Q 003963 585 LPRGSLFRLLQRN-TTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVG--DFGLSRLKHETYL 661 (783)
Q Consensus 585 ~~ggsL~~~L~~~-~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~--DFGla~~~~~~~~ 661 (783)
|+.|+|+..|... ...++..++..++.+|++|++|||+..+-|.---|....++||++.+.+|. |--++. .+
T Consensus 269 mp~gslynvlhe~t~vvvd~sqav~faldiargmaflhslep~ipr~~lns~hvmidedltarismad~kfsf--qe--- 343 (448)
T KOG0195|consen 269 MPFGSLYNVLHEQTSVVVDHSQAVRFALDIARGMAFLHSLEPMIPRFYLNSKHVMIDEDLTARISMADTKFSF--QE--- 343 (448)
T ss_pred ccchHHHHHHhcCccEEEecchHHHHHHHHHhhHHHHhhcchhhhhhhcccceEEecchhhhheecccceeee--ec---
Confidence 9999999999753 344778899999999999999999987433344578889999998766553 322221 11
Q ss_pred cccCCCCCCcccCcccccCCCCC---chhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhcccccccCCCCCCHHHHHH
Q 003963 662 TTKTGKGTPQWMAPEVLRNEPSD---EKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAAI 738 (783)
Q Consensus 662 ~~~~~~Gt~~Y~aPE~~~~~~~s---~~sDIwSLG~il~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~l~~L 738 (783)
......|.||+||.++.++.+ .+.|+|||.++||||-|...||.+..+.+.--.+.....+..+|+.+++.+..|
T Consensus 344 --~gr~y~pawmspealqrkped~n~raadmwsfaillwel~trevpfadlspmecgmkialeglrv~ippgis~hm~kl 421 (448)
T KOG0195|consen 344 --VGRAYSPAWMSPEALQRKPEDLNIRAADMWSFAILLWELNTREVPFADLSPMECGMKIALEGLRVHIPPGISRHMNKL 421 (448)
T ss_pred --cccccCcccCCHHHHhcCchhcchhhhhHHHHHHHHHHhhccccccccCCchhhhhhhhhccccccCCCCccHHHHHH
Confidence 123447899999999877653 579999999999999999999999999887777777777899999999999999
Q ss_pred HHHhhhhCCCCCCCHHHHHHHHHHHH
Q 003963 739 VESCWHSDPQCRPSFQELVDKLRDLQ 764 (783)
Q Consensus 739 I~~cL~~dP~~RPsa~ell~~L~~L~ 764 (783)
+.-|+..||.+||.++.++-.|++++
T Consensus 422 m~icmnedpgkrpkfdmivpilekm~ 447 (448)
T KOG0195|consen 422 MNICMNEDPGKRPKFDMIVPILEKMI 447 (448)
T ss_pred HHHHhcCCCCcCCCcceehhhHHHhc
Confidence 99999999999999999998888764
No 413
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=99.87 E-value=1.2e-23 Score=234.17 Aligned_cols=242 Identities=24% Similarity=0.393 Sum_probs=197.8
Q ss_pred eeccCCcEEEEEEEEeC----CceEEEEEEecccCCHHHHHHHHHHHHHHHhCC-CCceeeEeceeecCCceEEEEEecC
Q 003963 512 QIGQGSCGTVYHAVWYG----SQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLR-HPNVLLFMGAVTSPQRLCIVTEFLP 586 (783)
Q Consensus 512 ~LG~G~fG~Vy~a~~~~----~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~-HpnIv~l~~~~~~~~~~~lV~E~~~ 586 (783)
.+|+|.||.|+++...+ +.-||+|+..+.............|..++..++ ||.+|++...++.+..++++++|..
T Consensus 1 vlg~g~~gkvfLvrk~~g~da~~~yamkvl~k~t~~~~~~~~t~~er~il~~~~~~~f~v~lhyafqt~~kl~l~ld~~r 80 (612)
T KOG0603|consen 1 VLGQGSYGKVFLVRKAGGADAGHLYAMKVLKKATLKVRDRTHTKQERIILAFVHNTPFLVKLHYAFQTDGKLYLILDFLR 80 (612)
T ss_pred CCCcCCCcchHHHHHhccccccchhhhhcccccccccccccccccHHHHHhhccCCCceeeeeeeeccccchhHhhhhcc
Confidence 37999999999987433 345899988765433222224556888899887 9999999999999999999999999
Q ss_pred CCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCcccccccccccCC
Q 003963 587 RGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETYLTTKTG 666 (783)
Q Consensus 587 ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~ 666 (783)
||.|...+... ..+.+.....+...++-+++++|+.+ |+|||+|++||+++.+|++++.|||+++..-.....
T Consensus 81 gg~lft~l~~~-~~f~~~~~~~~~aelaLald~lh~l~--iiyrd~k~enilld~~Ghi~~tdfglske~v~~~~~---- 153 (612)
T KOG0603|consen 81 GGDLFTRLSKE-VMFDELDVAFYLAELALALDHLHKLG--IAYRDYKLENVLLLLEGHIKLTDFGLSKEAVKEKIA---- 153 (612)
T ss_pred cchhhhccccC-CchHHHHHHHHHHHHHHHHhhcchhH--HHHhcccccceeecccCccccCCchhhhHhHhhhhc----
Confidence 99999988653 44777777778889999999999999 999999999999999999999999999865543322
Q ss_pred CCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhcccccccCCCCCCHHHHHHHHHhhhhC
Q 003963 667 KGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAAIVESCWHSD 746 (783)
Q Consensus 667 ~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~l~~LI~~cL~~d 746 (783)
|||..|||||++. .+..++|.||||+++++|+||..||.. +....| ......+|..++..+++++..++.++
T Consensus 154 cgt~eymApEI~~--gh~~a~D~ws~gvl~felltg~~pf~~----~~~~~I--l~~~~~~p~~l~~~a~~~~~~l~~r~ 225 (612)
T KOG0603|consen 154 CGTYEYRAPEIIN--GHLSAADWWSFGVLAFELLTGTLPFGG----DTMKRI--LKAELEMPRELSAEARSLFRQLFKRN 225 (612)
T ss_pred ccchhhhhhHhhh--ccCCcccchhhhhhHHHHhhCCCCCch----HHHHHH--hhhccCCchhhhHHHHHHHHHHHhhC
Confidence 8999999999998 567889999999999999999999987 333333 34467889999999999999999999
Q ss_pred CCCCCCH--HHHHHHHHHHHHHHhhcC
Q 003963 747 PQCRPSF--QELVDKLRDLQRQYFQAS 771 (783)
Q Consensus 747 P~~RPsa--~ell~~L~~L~~~~f~~~ 771 (783)
|..|... +.+. +..+|.||+.+
T Consensus 226 p~nrLg~~~~~~~---eik~h~f~~~i 249 (612)
T KOG0603|consen 226 PENRLGAGPDGVD---EIKQHEFFQSI 249 (612)
T ss_pred HHHHhccCcchhH---HHhccchheee
Confidence 9999754 3332 23678888554
No 414
>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional
Probab=99.84 E-value=8.2e-21 Score=194.49 Aligned_cols=175 Identities=13% Similarity=0.129 Sum_probs=135.3
Q ss_pred cccccceeEeeeeccCCcEEEEEEEEeCCceEEEEEEecccCCH-HHHHH------HHHHHHHHHhCCCCceeeEeceee
Q 003963 501 EILWEDLTIGEQIGQGSCGTVYHAVWYGSQDVAVKVFSRQEYSD-EVIHS------FRQEVSLMKRLRHPNVLLFMGAVT 573 (783)
Q Consensus 501 e~~~~~y~i~~~LG~G~fG~Vy~a~~~~~~~vAiK~i~~~~~~~-~~~~~------~~~Ei~il~~l~HpnIv~l~~~~~ 573 (783)
.++.++|++.++||.|+||.||++.. .++.+|||++....... ..... +.+|+..+.++.||+|..+.+++.
T Consensus 27 ~~l~~~y~~~~~l~~~~f~~v~l~~~-~~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL~~~GI~~~~d~~~ 105 (232)
T PRK10359 27 DFLSYNIKTIKVFRNIDDTKVSLIDT-DYGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRVRSEGLASLNDFYL 105 (232)
T ss_pred HHhhCceEEEEEecCCCceEEEEEec-CCCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHHHHCCCCcceEeee
Confidence 34678999999999999999999765 56689999997655433 22233 578999999999999999988865
Q ss_pred cC--------CceEEEEEecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcE
Q 003963 574 SP--------QRLCIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTV 645 (783)
Q Consensus 574 ~~--------~~~~lV~E~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~v 645 (783)
.. ...+|+|||++|.+|.++.. +++ ....+++.+|..||+.| ++|||+||.||+++.+| +
T Consensus 106 ~~~~~~~~~~~~~~lvmEyi~G~tL~~~~~-----~~~----~~~~~i~~~l~~lH~~g--i~H~Dikp~Nili~~~g-i 173 (232)
T PRK10359 106 LAERKTLRYAHTYIMLIEYIEGVELNDMPE-----ISE----DVKAKIKASIESLHQHG--MVSGDPHKGNFIVSKNG-L 173 (232)
T ss_pred ecccccccccCCeEEEEEEECCccHHHhhh-----ccH----HHHHHHHHHHHHHHHcC--CccCCCChHHEEEeCCC-E
Confidence 33 35799999999999988742 222 23558999999999999 99999999999999988 9
Q ss_pred EEEecCCCcccccccccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHH
Q 003963 646 KVGDFGLSRLKHETYLTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELA 700 (783)
Q Consensus 646 kL~DFGla~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~ell 700 (783)
+|+|||........... .-......++.++|+|+||+++..+.
T Consensus 174 ~liDfg~~~~~~e~~a~------------d~~vler~y~~~~di~~lg~~~~~~~ 216 (232)
T PRK10359 174 RIIDLSGKRCTAQRKAK------------DRIDLERHYGIKNEIKDLGYYLLIYK 216 (232)
T ss_pred EEEECCCcccccchhhH------------HHHHHHhHhcccccccceeEeehHHH
Confidence 99999987644322110 01333444667899999999987664
No 415
>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]
Probab=99.83 E-value=3.8e-21 Score=223.07 Aligned_cols=261 Identities=20% Similarity=0.231 Sum_probs=192.6
Q ss_pred ceeEeeeeccCCcEEEEEEEEeCCceEEEEEEecccC--CHHHHHHHHHHHHHHHhCCCCceeeEeceeecCCceEEEEE
Q 003963 506 DLTIGEQIGQGSCGTVYHAVWYGSQDVAVKVFSRQEY--SDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIVTE 583 (783)
Q Consensus 506 ~y~i~~~LG~G~fG~Vy~a~~~~~~~vAiK~i~~~~~--~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lV~E 583 (783)
+|...+.||.+.|=+|.++++..+ .|+||++-+... +-.-..+...|++ ...+++||++.+.-+...+...|||-+
T Consensus 24 e~~~~~~LGstRFlKv~r~k~~eG-~vVvKVFvk~~p~~sL~~~~qrL~~ik-~~l~~~pn~lPfqk~~~t~kAAylvRq 101 (1431)
T KOG1240|consen 24 ECHYVENLGSTRFLKVARAKDREG-LVVVKVFVKQDPTISLRPFKQRLEEIK-FALMKAPNCLPFQKVLVTDKAAYLVRQ 101 (1431)
T ss_pred ceeeecccCchhhhhhhhccCCCc-eEEEEEEeccCCCCCchHHHHHHHHHH-HHhhcCCcccchHHHHHhhHHHHHHHH
Confidence 678889999999999999998876 499999876652 2222233333455 566789999999999888888999999
Q ss_pred ecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCcc--cccccc
Q 003963 584 FLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRL--KHETYL 661 (783)
Q Consensus 584 ~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~--~~~~~~ 661 (783)
|+. -+|++.|..++ -+..-+.++|+.||+.||..+|..| |+|+|||.+||||+.=.-+.|+||...+. .++...
T Consensus 102 yvk-hnLyDRlSTRP-FL~~iEKkWiaFQLL~al~qcH~~g--VcHGDIKsENILiTSWNW~~LtDFAsFKPtYLPeDNP 177 (1431)
T KOG1240|consen 102 YVK-HNLYDRLSTRP-FLVLIEKKWIAFQLLKALSQCHKLG--VCHGDIKSENILITSWNWLYLTDFASFKPTYLPEDNP 177 (1431)
T ss_pred HHh-hhhhhhhccch-HHHHHHHHHHHHHHHHHHHHHHHcC--ccccccccceEEEeeechhhhhcccccCCccCCCCCc
Confidence 994 59999997533 4777888899999999999999999 99999999999999988999999987642 222211
Q ss_pred cc-----cCCCCCCcccCcccccCCC-----------CCchhHHHHHHHHHHHHHc-CCCCCCCCChHHHHHHhh--ccc
Q 003963 662 TT-----KTGKGTPQWMAPEVLRNEP-----------SDEKSDVYSFGVILWELAT-EKIPWDNLNSMQVIGAVG--FMN 722 (783)
Q Consensus 662 ~~-----~~~~Gt~~Y~aPE~~~~~~-----------~s~~sDIwSLG~il~ellt-G~~Pf~~~~~~~~~~~i~--~~~ 722 (783)
.. .+...-..|.|||.+.... .+++-||||+||+++||++ |.+||.-. +++.... ...
T Consensus 178 adf~fFFDTSrRRtCYiAPERFv~~~~~~~~~q~~~~L~paMDIFS~GCViaELf~Eg~PlF~LS---QL~aYr~~~~~~ 254 (1431)
T KOG1240|consen 178 ADFTFFFDTSRRRTCYIAPERFVSALGKTSVGQDAPLLTPAMDIFSAGCVIAELFLEGRPLFTLS---QLLAYRSGNADD 254 (1431)
T ss_pred ccceEEEecCCceeeecChHhhhccccccccCCcccccChhhhhhhhhHHHHHHHhcCCCcccHH---HHHhHhccCccC
Confidence 11 1112234799999986421 4578899999999999998 78888421 1111110 000
Q ss_pred ccccCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHH---------HHHHHHHHhhcCcCCC
Q 003963 723 QRLEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDK---------LRDLQRQYFQASRSTV 775 (783)
Q Consensus 723 ~~~~~~~~~s~~l~~LI~~cL~~dP~~RPsa~ell~~---------L~~L~~~~f~~~~~~~ 775 (783)
...-+..--+..++.||..|++.||.+|.+++++|+. |..+.+.||.+.+...
T Consensus 255 ~e~~Le~Ied~~~Rnlil~Mi~rdPs~RlSAedyL~~yrG~~FP~yFy~FL~~Y~~~~~~~~ 316 (1431)
T KOG1240|consen 255 PEQLLEKIEDVSLRNLILSMIQRDPSKRLSAEDYLQKYRGLVFPEYFYSFLYDYLDRFVPLT 316 (1431)
T ss_pred HHHHHHhCcCccHHHHHHHHHccCchhccCHHHHHHhhhccccHHHHHHHHHHHHHhcCCcc
Confidence 0011112234578999999999999999999999987 6677788887666553
No 416
>KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms]
Probab=99.83 E-value=2.5e-20 Score=196.10 Aligned_cols=254 Identities=25% Similarity=0.360 Sum_probs=180.4
Q ss_pred cccccceeEeeeeccCCcEEEEEEEEeCC-----------------------------c-------eEEEEEEecccC--
Q 003963 501 EILWEDLTIGEQIGQGSCGTVYHAVWYGS-----------------------------Q-------DVAVKVFSRQEY-- 542 (783)
Q Consensus 501 e~~~~~y~i~~~LG~G~fG~Vy~a~~~~~-----------------------------~-------~vAiK~i~~~~~-- 542 (783)
....++|+|++.||+|....||.+..... + +.|||.+-.-..
T Consensus 153 kFtiddyeiG~~igkGC~AaVY~A~~~~dg~~le~~~~t~~~pgf~p~ts~p~e~~q~~~p~~~aFPLAiKmMfN~~~~s 232 (598)
T KOG4158|consen 153 KFTIDDYEIGEFIGKGCNAAVYSARLANDGSDLESSGNTHYGPGFNPVTSIPAEIPQVSKPAQKAFPLAIKMMFNFEHDS 232 (598)
T ss_pred ccchhhhcccchhhccchhhhhhhhcCCCcccccccCCCCcCCCcCCCcCCcccCCcccCccccccchHHHHhcccccCC
Confidence 44568999999999999999998864320 0 135665432221
Q ss_pred -CHHHHHHHHHHHH------H--------HHh--------CCCCceeeEeceeec-------------------------
Q 003963 543 -SDEVIHSFRQEVS------L--------MKR--------LRHPNVLLFMGAVTS------------------------- 574 (783)
Q Consensus 543 -~~~~~~~~~~Ei~------i--------l~~--------l~HpnIv~l~~~~~~------------------------- 574 (783)
+...++...+|.. + .+. -+|||||++..+|.+
T Consensus 233 ~~~~iL~sM~~ElvPa~~~a~~~e~~~~t~R~l~nqtvhLa~HPNIvri~~aF~dsv~~lPda~~~YPdalp~R~~p~g~ 312 (598)
T KOG4158|consen 233 GDAHILKSMGNELVPAPNAAKLLEGQMGTFRPLPNQTVHLAKHPNIVRIQTAFIDSVKVLPDAIERYPDALPARWYPSGA 312 (598)
T ss_pred chHHHHHHhhhhccCcchhhhhcccccceeeeCCCCCcccCCCCCEEeehhhhhhhhccCCchhhhCcccccceeccccc
Confidence 1223333333321 1 111 259999999887642
Q ss_pred --CCceEEEEEecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEc--CC--CcEEEE
Q 003963 575 --PQRLCIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVD--KH--WTVKVG 648 (783)
Q Consensus 575 --~~~~~lV~E~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~--~~--~~vkL~ 648 (783)
+..+|+||..... +|.+++-.+. .+......++.|+++|+.|||++| |.|||+|.+||||. ++ -.+.|+
T Consensus 313 g~~~tlylvMkrY~~-tLr~yl~~~~--~s~r~~~~~laQlLEav~hL~~hg--vAhRDlKSDNiL~ElddD~~P~LVva 387 (598)
T KOG4158|consen 313 GEPKTLYLVMKRYRQ-TLREYLWTRH--RSYRTGRVILAQLLEAVTHLHKHG--VAHRDLKSDNILLELDDDEIPQLVVA 387 (598)
T ss_pred CCCceEEEehhcchh-hHHHHHhcCC--CchHHHHHHHHHHHHHHHHHHHcc--chhhcccccceEEEecCCCCcEEEEc
Confidence 2347999998854 9999997543 667778888899999999999999 99999999999993 33 358999
Q ss_pred ecCCCccccc-----ccccc-cCCCCCCcccCcccccCCCC------CchhHHHHHHHHHHHHHcCCCCCCCCChHHHHH
Q 003963 649 DFGLSRLKHE-----TYLTT-KTGKGTPQWMAPEVLRNEPS------DEKSDVYSFGVILWELATEKIPWDNLNSMQVIG 716 (783)
Q Consensus 649 DFGla~~~~~-----~~~~~-~~~~Gt~~Y~aPE~~~~~~~------s~~sDIwSLG~il~elltG~~Pf~~~~~~~~~~ 716 (783)
|||++--... ++... ...-|....||||+....+- -.++|.|+.|.+-||++....||.......+..
T Consensus 388 DFGCcLAd~~hGlqlpy~S~~Vd~GGNa~lmAPEi~ta~PGp~avvny~kAD~WA~GalaYEIfg~~NPFY~rGem~L~~ 467 (598)
T KOG4158|consen 388 DFGCCLADDNHGLQLPYESDEVDLGGNAKLMAPEIATAVPGPNAVVNYEKADTWAAGALAYEIFGRSNPFYKRGEMLLDT 467 (598)
T ss_pred ccceeeeccccccccccccccccCCCcceecchhhhhcCCCCceeeccchhhhhhhhhhHHHHhccCCcccccchheech
Confidence 9998642221 11111 12236778999999865432 358999999999999999999998754443322
Q ss_pred HhhcccccccCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHH
Q 003963 717 AVGFMNQRLEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDK 759 (783)
Q Consensus 717 ~i~~~~~~~~~~~~~s~~l~~LI~~cL~~dP~~RPsa~ell~~ 759 (783)
.-......+.+|..+++.+++++..+|++||.+|++.+=....
T Consensus 468 r~Yqe~qLPalp~~vpp~~rqlV~~lL~r~pskRvsp~iAANv 510 (598)
T KOG4158|consen 468 RTYQESQLPALPSRVPPVARQLVFDLLKRDPSKRVSPNIAANV 510 (598)
T ss_pred hhhhhhhCCCCcccCChHHHHHHHHHhcCCccccCCccHHHhH
Confidence 2222345677899999999999999999999999987655444
No 417
>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c
Probab=99.83 E-value=1.9e-20 Score=188.58 Aligned_cols=142 Identities=19% Similarity=0.206 Sum_probs=108.9
Q ss_pred eeeeccCCcEEEEEEEEeCCceEEEEEEecccCCHHH------------------------HHHHHHHHHHHHhCCCCce
Q 003963 510 GEQIGQGSCGTVYHAVWYGSQDVAVKVFSRQEYSDEV------------------------IHSFRQEVSLMKRLRHPNV 565 (783)
Q Consensus 510 ~~~LG~G~fG~Vy~a~~~~~~~vAiK~i~~~~~~~~~------------------------~~~~~~Ei~il~~l~HpnI 565 (783)
...||+|+||.||+|.+..++.||||+++........ .....+|+.++..+.++++
T Consensus 2 ~~~ig~G~~~~Vy~a~~~~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~v 81 (190)
T cd05147 2 NGCISTGKEANVYHATTANGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLVTAGI 81 (190)
T ss_pred CCccccccceEEEEEECCCCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHHHCCC
Confidence 4679999999999999877789999999765321100 1223459999999987776
Q ss_pred eeEeceeecCCceEEEEEecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHH-HhCCCCEEecCCCCCCEEEcCCCc
Q 003963 566 LLFMGAVTSPQRLCIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYL-HHCNPPIIHRDLKSSNLLVDKHWT 644 (783)
Q Consensus 566 v~l~~~~~~~~~~~lV~E~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~L-H~~~~~IvHrDIKp~NILl~~~~~ 644 (783)
.....+.. ...+|||||++|++|...+.. ...++...+..++.|++.+|.+| |+.| |+||||||+|||++ ++.
T Consensus 82 ~~p~~~~~--~~~~iVmE~i~g~~l~~~~~~-~~~~~~~~~~~i~~qi~~~L~~l~H~~g--iiHrDlkP~NIli~-~~~ 155 (190)
T cd05147 82 PCPEPILL--KSHVLVMEFIGDDGWAAPRLK-DAPLSESKARELYLQVIQIMRILYQDCR--LVHADLSEYNLLYH-DGK 155 (190)
T ss_pred CCCcEEEe--cCCEEEEEEeCCCCCcchhhh-cCCCCHHHHHHHHHHHHHHHHHHHHhCC--cccCCCCHHHEEEE-CCc
Confidence 43332222 223899999988777654332 34688899999999999999999 6888 99999999999998 478
Q ss_pred EEEEecCCCcccc
Q 003963 645 VKVGDFGLSRLKH 657 (783)
Q Consensus 645 vkL~DFGla~~~~ 657 (783)
++|+|||++....
T Consensus 156 v~LiDFG~a~~~~ 168 (190)
T cd05147 156 LYIIDVSQSVEHD 168 (190)
T ss_pred EEEEEccccccCC
Confidence 9999999987543
No 418
>PRK12274 serine/threonine protein kinase; Provisional
Probab=99.82 E-value=1.8e-19 Score=181.09 Aligned_cols=187 Identities=16% Similarity=0.198 Sum_probs=141.0
Q ss_pred eEeeeeccCCcEEEEEEEEeCCceEEEEEEecccCC--HHHHHHHHHHHHHHHhCC-CCceeeEeceeecCCceEEEEEe
Q 003963 508 TIGEQIGQGSCGTVYHAVWYGSQDVAVKVFSRQEYS--DEVIHSFRQEVSLMKRLR-HPNVLLFMGAVTSPQRLCIVTEF 584 (783)
Q Consensus 508 ~i~~~LG~G~fG~Vy~a~~~~~~~vAiK~i~~~~~~--~~~~~~~~~Ei~il~~l~-HpnIv~l~~~~~~~~~~~lV~E~ 584 (783)
-+...|++|+||+||.+.. .+.+++.+.+.....- .-....+.+|+++|++|. |++|++++++ +..+++|||
T Consensus 5 ~~~~~l~~~~f~~v~~~~~-~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~~~~vP~ll~~----~~~~lvmey 79 (218)
T PRK12274 5 AVNEPLKSDTFGRILLVRG-GERKFVRRDLSAAPWWLRGVAWWLARREALALRQLDGLPRTPRLLHW----DGRHLDRSY 79 (218)
T ss_pred ccceeecCCCcceEEEeec-CCceeeecccccchhhhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEE----cCEEEEEee
Confidence 3467899999999997765 5667887776554331 112235789999999995 5889999886 346999999
Q ss_pred cCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCC-CCCCEEEcCCCcEEEEecCCCcccccccc--
Q 003963 585 LPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDL-KSSNLLVDKHWTVKVGDFGLSRLKHETYL-- 661 (783)
Q Consensus 585 ~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDI-Kp~NILl~~~~~vkL~DFGla~~~~~~~~-- 661 (783)
+.|.+|...+.. ....++.|++.+|.+||++| |+|||| ||+|||++.++.++|+|||++........
T Consensus 80 I~G~~L~~~~~~--------~~~~~~~qi~~~L~~lH~~G--IvHrDL~kp~NILv~~~g~i~LIDFG~A~~~~~~~~~~ 149 (218)
T PRK12274 80 LAGAAMYQRPPR--------GDLAYFRAARRLLQQLHRCG--VAHNDLAKEANWLVQEDGSPAVIDFQLAVRGNPRARWM 149 (218)
T ss_pred ecCccHHhhhhh--------hhHHHHHHHHHHHHHHHHCc--CccCCCCCcceEEEcCCCCEEEEECCCceecCCcchHH
Confidence 999998765421 11346779999999999999 999999 79999999999999999999985443221
Q ss_pred ---c--------ccCCCCCCcccCcccccCC-CCC-chhHHHHHHHHHHHHHcCCCCCCCC
Q 003963 662 ---T--------TKTGKGTPQWMAPEVLRNE-PSD-EKSDVYSFGVILWELATEKIPWDNL 709 (783)
Q Consensus 662 ---~--------~~~~~Gt~~Y~aPE~~~~~-~~s-~~sDIwSLG~il~elltG~~Pf~~~ 709 (783)
. .....+++.|+.|+...-- ..+ .+.++++.|+.+|.++|+..|+...
T Consensus 150 r~L~~rDl~~llk~~~~y~~~~l~~~~~~~l~~~~~~~~~w~~~g~~~~~~~~~~~~~~~~ 210 (218)
T PRK12274 150 RLLAREDLRHLLKHKRMYCPAALTPVERRVLKRTSWIRELWFATGKPVYRFVTRRVLHWED 210 (218)
T ss_pred HHHHHHHHHHHHHHHHhcCCCCCCHHHHhhhccchhHHHHHHHhcchHHHHHhccCCcccc
Confidence 0 1112368889999864432 233 6789999999999999999887543
No 419
>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A.
Probab=99.82 E-value=6e-20 Score=193.53 Aligned_cols=233 Identities=19% Similarity=0.295 Sum_probs=152.7
Q ss_pred ceeEeeeeccCCcEEEEEEEEeC-CceEEEEEEecccCCH-HHHHHHHHHHHHHHhCCC----------CceeeEeceee
Q 003963 506 DLTIGEQIGQGSCGTVYHAVWYG-SQDVAVKVFSRQEYSD-EVIHSFRQEVSLMKRLRH----------PNVLLFMGAVT 573 (783)
Q Consensus 506 ~y~i~~~LG~G~fG~Vy~a~~~~-~~~vAiK~i~~~~~~~-~~~~~~~~Ei~il~~l~H----------pnIv~l~~~~~ 573 (783)
.+..+..||.|+|+.||.+.+.. ++++|+|++....... ...+.+++|.-....+.+ -.++..++...
T Consensus 13 ~l~~~~~i~~g~~~~v~~v~d~~t~~~~avkvf~~~~~~~~~~~~~~~~e~l~~~~~~~~~~p~~a~~~~r~l~P~d~~~ 92 (288)
T PF14531_consen 13 TLVRGRIIGKGGFSIVFEVTDVETGEEFAVKVFLLPADASANEYEQLKEEQLAITLFPGVKNPKEAYRHLRFLVPLDLLR 92 (288)
T ss_dssp EEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEEESSTTHTTHHHHHHHHHHGGGGSTT--SHHHHHHHH-B---SEEEE
T ss_pred EEEEccccccCCceEEEEEEEccCCceEEEEEEecccccchHHHHHHHHHHHHhhhhccCCCHHHHHHhceEEeeeEEEE
Confidence 56778999999999999999976 5789999987655322 345666666654444322 11222222111
Q ss_pred ---------cC---C-----ceEEEEEecCCCCHHHHHhh---c-C--CcchHHHHHHHHHHHHHHHHHHHhCCCCEEec
Q 003963 574 ---------SP---Q-----RLCIVTEFLPRGSLFRLLQR---N-T--TKLDWRRRILMALDIARGVSYLHHCNPPIIHR 630 (783)
Q Consensus 574 ---------~~---~-----~~~lV~E~~~ggsL~~~L~~---~-~--~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHr 630 (783)
.. . ..+++|+-+ .++|.+++.. . . ..+.....+.+..|+++.+++||..| |||+
T Consensus 93 i~~~~~~~~~~~~~~~~~v~n~~~l~P~~-~~dL~~~~~~l~~~~~~~~~l~~~arl~lT~Q~I~lvA~Lh~~G--lVHg 169 (288)
T PF14531_consen 93 IPGKPPFFERGPGQSIYWVLNRFLLMPRA-QGDLQDLVEALFSRAQTHSPLAFAARLSLTVQMIRLVANLHSYG--LVHG 169 (288)
T ss_dssp ETTS-SEEEECETTEEEEEESEEEEEE---SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHTT--EEES
T ss_pred EcCCCcceecCCCCccceeehhhhccchh-hhcHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHHhhcc--eEec
Confidence 11 1 247788888 4588887642 1 1 12444455667789999999999999 9999
Q ss_pred CCCCCCEEEcCCCcEEEEecCCCcccccccccccCCCCCCcccCcccccC--------CCCCchhHHHHHHHHHHHHHcC
Q 003963 631 DLKSSNLLVDKHWTVKVGDFGLSRLKHETYLTTKTGKGTPQWMAPEVLRN--------EPSDEKSDVYSFGVILWELATE 702 (783)
Q Consensus 631 DIKp~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~~Gt~~Y~aPE~~~~--------~~~s~~sDIwSLG~il~elltG 702 (783)
||||+|++++.+|.++|+||+.....+..... ...+..|.+||.... ..++.+.|.|+||+++|.|+|+
T Consensus 170 di~~~nfll~~~G~v~Lg~F~~~~r~g~~~~~---~~~~~~~~PPe~~~~~~~~~~~~~~~t~~~DaW~LG~~ly~lWC~ 246 (288)
T PF14531_consen 170 DIKPENFLLDQDGGVFLGDFSSLVRAGTRYRC---SEFPVAFTPPELESCAGQFGQNNAPYTFATDAWQLGITLYSLWCG 246 (288)
T ss_dssp T-SGGGEEE-TTS-EEE--GGGEEETTEEEEG---GGS-TTTS-HHHHHHHTSCHHSEEEE-HHHHHHHHHHHHHHHHHS
T ss_pred ccceeeEEEcCCCCEEEcChHHHeecCceeec---cCCCcccCChhhhhhhcccCcccceeeeccCHHHHHHHHHHHHHc
Confidence 99999999999999999999987666554432 223577999997643 2458899999999999999999
Q ss_pred CCCCCCCChHHHHHHhhcccccccCCCCCCHHHHHHHHHhhhhCCCCC
Q 003963 703 KIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAAIVESCWHSDPQCR 750 (783)
Q Consensus 703 ~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~l~~LI~~cL~~dP~~R 750 (783)
..||......... ...+.....+|..++.||..+|+++|.+|
T Consensus 247 ~lPf~~~~~~~~~------~~~f~~C~~~Pe~v~~LI~~lL~~~~~~R 288 (288)
T PF14531_consen 247 RLPFGLSSPEADP------EWDFSRCRDMPEPVQFLIRGLLQRNPEDR 288 (288)
T ss_dssp S-STCCCGGGSTS------GGGGTTSS---HHHHHHHHHHT-SSGGGS
T ss_pred cCCCCCCCccccc------cccchhcCCcCHHHHHHHHHHccCCcccC
Confidence 9999765432211 11334445788999999999999999987
No 420
>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.81 E-value=6.2e-19 Score=209.34 Aligned_cols=251 Identities=24% Similarity=0.314 Sum_probs=191.4
Q ss_pred cccccccceeEeeeeccCCcEEEEEEEEeCCceEEEEEEecccCCHHHHHHHHHHHHHHHhCC---CCceeeEeceeecC
Q 003963 499 DYEILWEDLTIGEQIGQGSCGTVYHAVWYGSQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLR---HPNVLLFMGAVTSP 575 (783)
Q Consensus 499 ~~e~~~~~y~i~~~LG~G~fG~Vy~a~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~---HpnIv~l~~~~~~~ 575 (783)
..+...+.|.|.+.||+|+||.||+|...+++.||||+-+..... +|.--.+++.+|+ -+.|..++.++...
T Consensus 692 ~~~~~~~~~~I~~e~G~g~y~~vy~a~~~~~~~~alK~e~P~~~W-----EfYI~~q~~~RLk~~~~~~~~~~~~a~~~~ 766 (974)
T KOG1166|consen 692 EFEVGGEKFCISKEIGEGSYGSVYVATHSNGKLVALKVEKPPNPW-----EFYICLQVMERLKPQMLPSIMHISSAHVFQ 766 (974)
T ss_pred eeeecceeEEEEeeeccccceEEEEeecCCCcEEEEEeecCCCce-----eeeehHHHHHhhchhhhcchHHHHHHHccC
Confidence 445567789999999999999999999888888999996655432 2222344555555 24566666666777
Q ss_pred CceEEEEEecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcC-------CCcEEEE
Q 003963 576 QRLCIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDK-------HWTVKVG 648 (783)
Q Consensus 576 ~~~~lV~E~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~-------~~~vkL~ 648 (783)
+..+||+||.+.|+|.+++.. ....++..+..+..||+..+..||.++ |||+||||+|+||.. .--++|+
T Consensus 767 ~~S~lv~ey~~~Gtlld~~N~-~~~m~e~lv~~~~~qml~ive~lH~~~--IIHgDiKPDNfll~~~~~~~~~~~~l~lI 843 (974)
T KOG1166|consen 767 NASVLVSEYSPYGTLLDLINT-NKVMDEYLVMFFSCQMLRIVEHLHAMG--IIHGDIKPDNFLLRREICADSDSKGLYLI 843 (974)
T ss_pred CcceeeeeccccccHHHhhcc-CCCCCchhhhHHHHHHHHHHHHHHhcc--eecccCCcceeEeecccCCCCcccceEEE
Confidence 888999999999999999984 456899999999999999999999999 999999999999942 3459999
Q ss_pred ecCCCccc---ccccccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhcccccc
Q 003963 649 DFGLSRLK---HETYLTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRL 725 (783)
Q Consensus 649 DFGla~~~---~~~~~~~~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~elltG~~Pf~~~~~~~~~~~i~~~~~~~ 725 (783)
|||.+.-+ .+. ..-...++|-.+-++|+..|.+|++.+|.|.|..+++-||.|++- . + ......
T Consensus 844 DfG~siDm~lfp~~-~~F~~~~~td~f~C~EM~~grpWtYq~DyfGlAa~~h~mLFG~y~----------q-~-~~g~~~ 910 (974)
T KOG1166|consen 844 DFGRSIDMKLFPDG-TKFKAVWHTDLFDCIEMREGRPWTYQIDYFGLAATVHVMLFGKYM----------E-V-KNGSSW 910 (974)
T ss_pred ecccceeeeEcCCC-cEEeeeeccccchhHHHhcCCCCchhhhhHHHHHHHHHHHHHHHH----------H-h-cCCcce
Confidence 99988532 222 122345678899999999999999999999999999999999631 1 1 111112
Q ss_pred c----CCCCCC-HHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhc
Q 003963 726 E----IPKDVD-PRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQA 770 (783)
Q Consensus 726 ~----~~~~~s-~~l~~LI~~cL~~dP~~RPsa~ell~~L~~L~~~~f~~ 770 (783)
. ++..+. .-|..|+..+|..|-..=|...+|...|+.+...-|+.
T Consensus 911 ~~~~~~~Ry~~~~~W~~~F~~lLN~~~~~~p~l~~lr~~~~~~~~~~~~~ 960 (974)
T KOG1166|consen 911 MVKTNFPRYWKRDMWNKFFDLLLNPDCDTLPNLQELRTELEEVLAEHFTG 960 (974)
T ss_pred eccccchhhhhHHHHHHHHHHHhCcCcccchhHHHHHHHHHHHHHHHHHH
Confidence 2 222222 24788999999955555588888888888887777653
No 421
>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro
Probab=99.80 E-value=3.4e-19 Score=179.68 Aligned_cols=142 Identities=20% Similarity=0.193 Sum_probs=111.0
Q ss_pred eeeeccCCcEEEEEEEEeCCceEEEEEEecccCC----------------------H--HHHHHHHHHHHHHHhCCCCce
Q 003963 510 GEQIGQGSCGTVYHAVWYGSQDVAVKVFSRQEYS----------------------D--EVIHSFRQEVSLMKRLRHPNV 565 (783)
Q Consensus 510 ~~~LG~G~fG~Vy~a~~~~~~~vAiK~i~~~~~~----------------------~--~~~~~~~~Ei~il~~l~HpnI 565 (783)
.+.||+|+||.||+|.+.+++.||||++...... . .....+..|...+..+.|++|
T Consensus 2 ~~~ig~G~~~~Vy~a~~~~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i 81 (190)
T cd05145 2 NGCISTGKEANVYHARTGDGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLYEAGV 81 (190)
T ss_pred CceeecCCCcEEEEEEcCCCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 4689999999999999877789999998765311 0 012234678999999999887
Q ss_pred eeEeceeecCCceEEEEEecCCCCHHHH-HhhcCCcchHHHHHHHHHHHHHHHHHHHh-CCCCEEecCCCCCCEEEcCCC
Q 003963 566 LLFMGAVTSPQRLCIVTEFLPRGSLFRL-LQRNTTKLDWRRRILMALDIARGVSYLHH-CNPPIIHRDLKSSNLLVDKHW 643 (783)
Q Consensus 566 v~l~~~~~~~~~~~lV~E~~~ggsL~~~-L~~~~~~l~~~~~~~i~~qi~~aL~~LH~-~~~~IvHrDIKp~NILl~~~~ 643 (783)
.....+... ..||||||++|+++... +.. ..++...+..++.|++.+|.+||. .| |+||||||+|||++ ++
T Consensus 82 ~~p~~~~~~--~~~lVmE~~~g~~~~~~~l~~--~~~~~~~~~~i~~~l~~~l~~lH~~~g--ivHrDlkP~NIll~-~~ 154 (190)
T cd05145 82 PVPEPILLK--KNVLVMEFIGDDGSPAPRLKD--VPLEEEEAEELYEQVVEQMRRLYQEAG--LVHGDLSEYNILYH-DG 154 (190)
T ss_pred CCceEEEec--CCEEEEEEecCCCchhhhhhh--ccCCHHHHHHHHHHHHHHHHHHHHhCC--EecCCCChhhEEEE-CC
Confidence 544433332 24899999988755433 432 357788899999999999999999 88 99999999999999 78
Q ss_pred cEEEEecCCCccccc
Q 003963 644 TVKVGDFGLSRLKHE 658 (783)
Q Consensus 644 ~vkL~DFGla~~~~~ 658 (783)
.++|+|||++.....
T Consensus 155 ~~~liDFG~a~~~~~ 169 (190)
T cd05145 155 KPYIIDVSQAVELDH 169 (190)
T ss_pred CEEEEEcccceecCC
Confidence 999999999875543
No 422
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=99.79 E-value=1.3e-19 Score=210.70 Aligned_cols=220 Identities=29% Similarity=0.441 Sum_probs=160.4
Q ss_pred cceeEeeeeccCCcEEEEEEEEeCC-ceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEeceeecCCceEEEEE
Q 003963 505 EDLTIGEQIGQGSCGTVYHAVWYGS-QDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIVTE 583 (783)
Q Consensus 505 ~~y~i~~~LG~G~fG~Vy~a~~~~~-~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lV~E 583 (783)
.+|..++.|-.|+||.||.+.++.. +++|+|+ .++..- +++ ++.....|++|
T Consensus 83 ~df~~IklisngAygavylvrh~~trqrfa~ki-Nkq~li------lRn---ilt~a~npfvv----------------- 135 (1205)
T KOG0606|consen 83 SDFNTIKLISNGAYGAVYLVRHKETRQRFAMKI-NKQNLI------LRN---ILTFAGNPFVV----------------- 135 (1205)
T ss_pred cccceeEeeccCCCCceeeeeccccccchhhcc-cccchh------hhc---cccccCCccee-----------------
Confidence 4678899999999999999998764 6788854 222210 001 33333445444
Q ss_pred ecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCcccccccc--
Q 003963 584 FLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETYL-- 661 (783)
Q Consensus 584 ~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~~-- 661 (783)
|+-...++. ..+++. +++.+++|||+.+ |+|||+||+|+||+.-|++|++|||+++.......
T Consensus 136 ----gDc~tllk~-~g~lPv--------dmvla~Eylh~yg--ivhrdlkpdnllIT~mGhiKlTDfgLsk~GLms~atn 200 (1205)
T KOG0606|consen 136 ----GDCATLLKN-IGPLPV--------DMVLAVEYLHSYG--IVHRDLKPDNLLITSMGHIKLTDFGLSKKGLMSLATN 200 (1205)
T ss_pred ----chhhhhccc-CCCCcc--------hhhHHhHhhccCC--eecCCCCCCcceeeecccccccchhhhhhhhhhccch
Confidence 233333322 122333 3378999999998 99999999999999999999999999875332211
Q ss_pred -------------cccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhc-ccccccC
Q 003963 662 -------------TTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGF-MNQRLEI 727 (783)
Q Consensus 662 -------------~~~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~elltG~~Pf~~~~~~~~~~~i~~-~~~~~~~ 727 (783)
.....+|||.|.|||++.-..|+..+|+|+||+++|+++.|..||.+..+.+++..+.. ....++-
T Consensus 201 l~eg~I~k~t~Ef~dKqvcgTPeyiaPeVilrqgygkpvdwwamGiIlyeFLVgcvpffGdtpeelfg~visd~i~wpE~ 280 (1205)
T KOG0606|consen 201 LKEGHIEKDTHEFQDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEELFGQVISDDIEWPEE 280 (1205)
T ss_pred hhhcchHHHHHHhhhccccCCccccChhhhhhhccCCCccHHHHHHHHHHHheeeeeccCCCHHHHHhhhhhhhcccccc
Confidence 12234799999999999999999999999999999999999999999988887766532 2223333
Q ss_pred CCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhh
Q 003963 728 PKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQ 769 (783)
Q Consensus 728 ~~~~s~~l~~LI~~cL~~dP~~RPsa~ell~~L~~L~~~~f~ 769 (783)
...++++++++|.++|+.+|..|-..... ++--+|.||+
T Consensus 281 dea~p~Ea~dli~~LL~qnp~~Rlgt~ga---~evk~h~ff~ 319 (1205)
T KOG0606|consen 281 DEALPPEAQDLIEQLLRQNPLCRLGTGGA---LEVKQHGFFQ 319 (1205)
T ss_pred CcCCCHHHHHHHHHHHHhChHhhcccchh---hhhhhcccee
Confidence 45688999999999999999999633322 2225788875
No 423
>PRK10345 hypothetical protein; Provisional
Probab=99.77 E-value=4e-18 Score=173.78 Aligned_cols=134 Identities=16% Similarity=0.243 Sum_probs=104.5
Q ss_pred eeeeccCCcEEEEEEEEeCCceEEEEEEecccCCHHHHHHHHHHHHHHHhC-----CCCceeeEeceeecCC---ceE-E
Q 003963 510 GEQIGQGSCGTVYHAVWYGSQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRL-----RHPNVLLFMGAVTSPQ---RLC-I 580 (783)
Q Consensus 510 ~~~LG~G~fG~Vy~a~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l-----~HpnIv~l~~~~~~~~---~~~-l 580 (783)
.++||+|+||.||. +......+||++...... ....+.+|+.+++.+ .||||+++|++++++. .++ +
T Consensus 7 ~~~LG~G~~~~Vy~--hp~~~~k~IKv~~~~~~~--~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~~g~g~v~~~ 82 (210)
T PRK10345 7 QSPLGTGRHRKCYA--HPEDAQRCIKIVYHRGDG--GDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETDCGTGYVYDV 82 (210)
T ss_pred cceecCCCceEEEE--CCCCcCeEEEEEeccccc--hHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeCCCCeEEEEE
Confidence 46899999999995 444444579988664322 245789999999999 5799999999998874 434 7
Q ss_pred EEEe--cCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHH-HHHHhCCCCEEecCCCCCCEEEcC----CCcEEEEecCCC
Q 003963 581 VTEF--LPRGSLFRLLQRNTTKLDWRRRILMALDIARGV-SYLHHCNPPIIHRDLKSSNLLVDK----HWTVKVGDFGLS 653 (783)
Q Consensus 581 V~E~--~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL-~~LH~~~~~IvHrDIKp~NILl~~----~~~vkL~DFGla 653 (783)
|||| +.+++|.+++.+. .+++. ..++.+++.++ +|||+++ ||||||||+|||++. ++.++|+||+.+
T Consensus 83 I~e~~G~~~~tL~~~l~~~--~~~e~--~~~~~~~L~~l~~yLh~~~--IvhrDlKp~NILl~~~~~~~~~~~LiDg~G~ 156 (210)
T PRK10345 83 IADFDGKPSITLTEFAEQC--RYEED--VAQLRQLLKKLKRYLLDNR--IVTMELKPQNILCQRISESEVIPVVCDNIGE 156 (210)
T ss_pred EecCCCCcchhHHHHHHcc--cccHh--HHHHHHHHHHHHHHHHHCC--EeecCCCHHHEEEeccCCCCCcEEEEECCCC
Confidence 8999 5578999999753 35555 35577888777 9999999 999999999999974 347999995433
No 424
>PRK14879 serine/threonine protein kinase; Provisional
Probab=99.73 E-value=3.7e-17 Score=167.05 Aligned_cols=136 Identities=25% Similarity=0.361 Sum_probs=113.4
Q ss_pred eeeccCCcEEEEEEEEeCCceEEEEEEecccCCH------HHHHHHHHHHHHHHhCCCCceeeEeceeecCCceEEEEEe
Q 003963 511 EQIGQGSCGTVYHAVWYGSQDVAVKVFSRQEYSD------EVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIVTEF 584 (783)
Q Consensus 511 ~~LG~G~fG~Vy~a~~~~~~~vAiK~i~~~~~~~------~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lV~E~ 584 (783)
+.||+|++|.||+|.+ .+..+++|+........ .....+.+|+.++..+.|++|+....++......+++|||
T Consensus 2 ~~l~~G~~~~vy~~~~-~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~ 80 (211)
T PRK14879 2 KLIKRGAEAEIYLGDF-LGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRARKAGVNVPAVYFVDPENFIIVMEY 80 (211)
T ss_pred cccccCceEEEEEEee-CCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHHHCCCCCCeEEEEeCCCCEEEEEE
Confidence 5799999999999987 45689999865443221 1224577899999999999988777777777788999999
Q ss_pred cCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCcc
Q 003963 585 LPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRL 655 (783)
Q Consensus 585 ~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~ 655 (783)
++|++|.+++.... . ....++.+++.+|.+||+.+ ++|+|++|.|||++ ++.++|+|||++..
T Consensus 81 ~~G~~L~~~~~~~~----~-~~~~i~~~i~~~l~~lH~~~--i~H~Dl~p~Nil~~-~~~~~liDf~~a~~ 143 (211)
T PRK14879 81 IEGEPLKDLINSNG----M-EELELSREIGRLVGKLHSAG--IIHGDLTTSNMILS-GGKIYLIDFGLAEF 143 (211)
T ss_pred eCCcCHHHHHHhcc----H-HHHHHHHHHHHHHHHHHhCC--cccCCCCcccEEEE-CCCEEEEECCcccC
Confidence 99999999986532 1 77888999999999999998 99999999999999 78999999999865
No 425
>KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms]
Probab=99.71 E-value=3.7e-17 Score=182.78 Aligned_cols=208 Identities=34% Similarity=0.577 Sum_probs=163.4
Q ss_pred HHhCCCCceeeEeceeecCCceEEEEEecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCC
Q 003963 557 MKRLRHPNVLLFMGAVTSPQRLCIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSN 636 (783)
Q Consensus 557 l~~l~HpnIv~l~~~~~~~~~~~lV~E~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~N 636 (783)
|+.+.|.|+.+|++.+.+....++|.+||..|+|.+.+......+++.....++++|+.||.|||..-. ..|+.++..|
T Consensus 1 l~~l~h~n~~~f~g~~~~~~~~~~i~~~c~rGsl~D~i~~~~~~~d~~F~~s~~rdi~~Gl~ylh~s~i-~~hg~l~s~n 79 (484)
T KOG1023|consen 1 LRQLDHDNLNKFIGASVDGPEMIVIWEYCSRGSLLDILSNEDIKLDYFFILSFIRDISKGLAYLHNSPI-GYHGALKSSN 79 (484)
T ss_pred CcccchhhhhhheeeEecCCceEEEEeeecCccHHhHHhccccCccHHHHHHHHHHHHHHHHHHhcCcc-eeeeeecccc
Confidence 356889999999999999999999999999999999999878889999999999999999999998652 2999999999
Q ss_pred EEEcCCCcEEEEecCCCcccccc--cccccCCCCCCcccCcccccCCC-------CCchhHHHHHHHHHHHHHcCCCCCC
Q 003963 637 LLVDKHWTVKVGDFGLSRLKHET--YLTTKTGKGTPQWMAPEVLRNEP-------SDEKSDVYSFGVILWELATEKIPWD 707 (783)
Q Consensus 637 ILl~~~~~vkL~DFGla~~~~~~--~~~~~~~~Gt~~Y~aPE~~~~~~-------~s~~sDIwSLG~il~elltG~~Pf~ 707 (783)
.+++..+.+||+|||+....... ........-...|.|||.+.+.. .+.+.||||+|++++|+++...||.
T Consensus 80 Clvd~~w~lklt~~Gl~~~~~~~~~~~~~~~~~~~~lw~aPellr~~~~~~~~~~~~~~gdiYs~~ii~~ei~~r~~~~~ 159 (484)
T KOG1023|consen 80 CLVDSRWVLKLTDFGLNSLLEETAEPEAHHPIRKALLWTAPELLRGALSQSLESALTQKGDIYSFGIIMYEILFRSGPFD 159 (484)
T ss_pred ceeeeeEEEEechhhhcccccccccccccchhHHHHhccCHHHhcccccccccccccccCCeehHHHHHHHHHhccCccc
Confidence 99999999999999998765421 00011111245789999988742 3567999999999999999999996
Q ss_pred CCC----hHHHHHHhhcccc---cccCC--CCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHH
Q 003963 708 NLN----SMQVIGAVGFMNQ---RLEIP--KDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQR 765 (783)
Q Consensus 708 ~~~----~~~~~~~i~~~~~---~~~~~--~~~s~~l~~LI~~cL~~dP~~RPsa~ell~~L~~L~~ 765 (783)
... ..+....+..... ++.+. ...++++..++..||..+|..||++.++-..++.+..
T Consensus 160 ~~~~~~~~~eii~~~~~~~~~~~rP~i~~~~e~~~~l~~l~~~cw~e~P~~rPs~~~i~~~~~~~~~ 226 (484)
T KOG1023|consen 160 LRNLVEDPDEIILRVKKGGSNPFRPSIELLNELPPELLLLVARCWEEIPEKRPSIEQIRSKLLTINK 226 (484)
T ss_pred cccccCChHHHHHHHHhcCCCCcCcchhhhhhcchHHHHHHHHhcccChhhCccHHHHHhhhhhhcc
Confidence 532 2234434333111 11121 1456689999999999999999999999887776544
No 426
>TIGR03724 arch_bud32 Kae1-associated kinase Bud32. Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.
Probab=99.70 E-value=1.5e-16 Score=161.02 Aligned_cols=133 Identities=24% Similarity=0.331 Sum_probs=106.8
Q ss_pred eeccCCcEEEEEEEEeCCceEEEEEEecccCCH------HHHHHHHHHHHHHHhCCCCceeeEeceeecCCceEEEEEec
Q 003963 512 QIGQGSCGTVYHAVWYGSQDVAVKVFSRQEYSD------EVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIVTEFL 585 (783)
Q Consensus 512 ~LG~G~fG~Vy~a~~~~~~~vAiK~i~~~~~~~------~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lV~E~~ 585 (783)
.||+|+||.||++.+. +.+|++|+........ .....+.+|+.++..+.|+++.....++......++||||+
T Consensus 1 ~ig~G~~~~vy~~~~~-~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~~ 79 (199)
T TIGR03724 1 LIAKGAEAIIYLGDFL-GLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRARKAGVNTPVVYDVDPDNKTIVMEYI 79 (199)
T ss_pred CCCCCceEEEEEeecC-CccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEEEE
Confidence 3899999999999854 5689999865433211 12356778999999999887655554555666789999999
Q ss_pred CCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCccc
Q 003963 586 PRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLK 656 (783)
Q Consensus 586 ~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~ 656 (783)
+|++|.+++.... . .++.+++.+|.+||+.+ ++|+|++|.||+++ ++.++++|||++...
T Consensus 80 ~g~~l~~~~~~~~--~------~~~~~i~~~l~~lH~~g--i~H~Dl~~~Nil~~-~~~~~liDfg~a~~~ 139 (199)
T TIGR03724 80 EGKPLKDVIEEGN--D------ELLREIGRLVGKLHKAG--IVHGDLTTSNIIVR-DDKLYLIDFGLGKYS 139 (199)
T ss_pred CCccHHHHHhhcH--H------HHHHHHHHHHHHHHHCC--eecCCCCcceEEEE-CCcEEEEECCCCcCC
Confidence 9999999875422 1 77889999999999998 99999999999999 789999999998653
No 427
>PF13426 PAS_9: PAS domain; PDB: 3ULF_B 3UE6_E 2Z6D_B 2Z6C_B 3P7N_B 1LL8_A 3MJQ_A 3BWL_A 4EET_B 4EEP_A ....
Probab=99.69 E-value=4.7e-16 Score=138.81 Aligned_cols=104 Identities=27% Similarity=0.522 Sum_probs=95.5
Q ss_pred CcceEEEcCCCcEEEecHHHHHHcCCChhhHcCCCccccccccccchHHHHHHHHHHhCCeEEEEEEEEcCCCCEEEEEE
Q 003963 140 GQSVHIFDLSDRIIYWNRSAELLYGYSAEEALGQDAIELLTDGRDFDVAYDIVHRIKMGERWTGQFPAKTKTEERVLVVA 219 (783)
Q Consensus 140 ~d~I~i~D~~G~Ii~~N~aae~L~Gys~eEllG~~~~~l~~~~~~~~~~~~l~~~l~~g~~~~~e~~~~~kdG~~~~v~~ 219 (783)
|++|+++|.+|+|++||++|++++||++++++|+++.+++.+.........+.+++..+..+..++.+++++|..+|+.+
T Consensus 1 p~~i~i~d~~g~i~~~N~~~~~~~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~g~~~~~~~ 80 (104)
T PF13426_consen 1 PDGIFILDPDGRILYVNPAFERLFGYSREELIGKSISDFFPEEDRPEFEEQIERALEEGGSWSGEVRLRRKDGETFWVEV 80 (104)
T ss_dssp -SEEEEEETTSBEEEE-HHHHHHHTS-HHHHTTSBGGGGCSTTSCHHHHHHHHHHHHHTSSEEEEEEEEETTSEEEEEEE
T ss_pred CEEEEEECCcCcEEehhHHHHHHHCcCHHHHcCCCcccccCcccchhhHHHHHHHHhcCCceeEEEEEEcCCCCEEEEEE
Confidence 68999999999999999999999999999999999999998777667777888999999999999999999999999999
Q ss_pred EEEEEECCCCCEEEEEEEEEehHH
Q 003963 220 TNTPFYDDDGTLVGIVCVSTDSRP 243 (783)
Q Consensus 220 ~~~Pi~d~~G~v~g~v~i~rDITe 243 (783)
++.|+.+++|++.+++++++|||+
T Consensus 81 ~~~~i~~~~g~~~~~i~~~~DiTe 104 (104)
T PF13426_consen 81 SASPIRDEDGEITGIIGIFRDITE 104 (104)
T ss_dssp EEEEEEETTSSEEEEEEEEEEEHH
T ss_pred EEEEEECCCCCEEEEEEEEEECCC
Confidence 999999999999999999999996
No 428
>smart00090 RIO RIO-like kinase.
Probab=99.68 E-value=1.6e-16 Score=165.63 Aligned_cols=145 Identities=23% Similarity=0.200 Sum_probs=111.3
Q ss_pred ceeEeeeeccCCcEEEEEEE--EeCCceEEEEEEecccCC--------------------H--HHHHHHHHHHHHHHhCC
Q 003963 506 DLTIGEQIGQGSCGTVYHAV--WYGSQDVAVKVFSRQEYS--------------------D--EVIHSFRQEVSLMKRLR 561 (783)
Q Consensus 506 ~y~i~~~LG~G~fG~Vy~a~--~~~~~~vAiK~i~~~~~~--------------------~--~~~~~~~~Ei~il~~l~ 561 (783)
-|.+.+.||+|+||.||+|. ...++.||||++...... . .....+..|+.+++.+.
T Consensus 29 ~~~i~~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~L~~L~ 108 (237)
T smart00090 29 LSAIGGCISTGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFRNLQRLY 108 (237)
T ss_pred hHHhCCeeccCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 47899999999999999998 356788999998754321 0 11234578999999997
Q ss_pred CC--ceeeEeceeecCCceEEEEEecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEE
Q 003963 562 HP--NVLLFMGAVTSPQRLCIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLV 639 (783)
Q Consensus 562 Hp--nIv~l~~~~~~~~~~~lV~E~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl 639 (783)
+. .+++++.+ ...++||||++|.+|..++... ..+.......++.||+.+|++||..| +|+|+||||+||++
T Consensus 109 ~~~i~~p~~~~~----~~~~lV~E~~~g~~L~~~~~~~-~~~~~~~~~~i~~qi~~~l~~LH~~g-~iiH~Dikp~NIli 182 (237)
T smart00090 109 EAGVPVPKPIAW----RRNVLVMEFIGGDGLPAPRLKD-VEPEEEEEFELYDDILEEMRKLYKEG-ELVHGDLSEYNILV 182 (237)
T ss_pred hcCCCCCeeeEe----cCceEEEEEecCCccccccccc-CCcchHHHHHHHHHHHHHHHHHHhcC-CEEeCCCChhhEEE
Confidence 53 34444543 2358999999998887655332 34566667889999999999999875 39999999999999
Q ss_pred cCCCcEEEEecCCCcccc
Q 003963 640 DKHWTVKVGDFGLSRLKH 657 (783)
Q Consensus 640 ~~~~~vkL~DFGla~~~~ 657 (783)
+ ++.++|+|||.+....
T Consensus 183 ~-~~~i~LiDFg~a~~~~ 199 (237)
T smart00090 183 H-DGKVVIIDVSQSVELD 199 (237)
T ss_pred E-CCCEEEEEChhhhccC
Confidence 9 7899999999886443
No 429
>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom
Probab=99.67 E-value=3.2e-16 Score=158.97 Aligned_cols=137 Identities=23% Similarity=0.206 Sum_probs=107.7
Q ss_pred eeEeeeeccCCcEEEEEEEEeCCceEEEEEEecccCCH--------------------HHHHHHHHHHHHHHhCCCCc--
Q 003963 507 LTIGEQIGQGSCGTVYHAVWYGSQDVAVKVFSRQEYSD--------------------EVIHSFRQEVSLMKRLRHPN-- 564 (783)
Q Consensus 507 y~i~~~LG~G~fG~Vy~a~~~~~~~vAiK~i~~~~~~~--------------------~~~~~~~~Ei~il~~l~Hpn-- 564 (783)
|.+.+.||+|+||.||++....++.||||++....... .....+..|+.++..+.|++
T Consensus 17 ~~~~~~i~~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~ 96 (198)
T cd05144 17 ESLGNQIGVGKESDVYLALDPDGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAALKALYEEGFP 96 (198)
T ss_pred hhcCCccccCcceEEEEEEcCCCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHHHHHHHcCCC
Confidence 77889999999999999998778899999976532110 11123667888999887774
Q ss_pred eeeEeceeecCCceEEEEEecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCc
Q 003963 565 VLLFMGAVTSPQRLCIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWT 644 (783)
Q Consensus 565 Iv~l~~~~~~~~~~~lV~E~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~ 644 (783)
++..++ ....++||||++|++|..+... .....++.+++.++.++|+.+ |+|+||||+||+++.++.
T Consensus 97 v~~~~~----~~~~~lv~e~~~g~~L~~~~~~-------~~~~~~~~~i~~~l~~lh~~g--i~H~Dl~p~Nill~~~~~ 163 (198)
T cd05144 97 VPKPID----WNRHAVVMEYIDGVELYRVRVL-------EDPEEVLDEILEEIVKAYKHG--IIHGDLSEFNILVDDDEK 163 (198)
T ss_pred CCceee----cCCceEEEEEeCCcchhhcccc-------ccHHHHHHHHHHHHHHHHHCC--CCcCCCCcccEEEcCCCc
Confidence 444443 2456899999999998776431 234567889999999999988 999999999999999999
Q ss_pred EEEEecCCCccc
Q 003963 645 VKVGDFGLSRLK 656 (783)
Q Consensus 645 vkL~DFGla~~~ 656 (783)
++|+|||++...
T Consensus 164 ~~liDfg~~~~~ 175 (198)
T cd05144 164 IYIIDWPQMVST 175 (198)
T ss_pred EEEEECCccccC
Confidence 999999998543
No 430
>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated
Probab=99.66 E-value=8.2e-16 Score=179.32 Aligned_cols=138 Identities=23% Similarity=0.316 Sum_probs=111.6
Q ss_pred cceeEeeeeccCCcEEEEEEEEeCCceEEEEEEecccC-C-----HHHHHHHHHHHHHHHhCCCCceeeEeceeecCCce
Q 003963 505 EDLTIGEQIGQGSCGTVYHAVWYGSQDVAVKVFSRQEY-S-----DEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRL 578 (783)
Q Consensus 505 ~~y~i~~~LG~G~fG~Vy~a~~~~~~~vAiK~i~~~~~-~-----~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~ 578 (783)
..|...+.||+|+||.||++.+... .+++|+...... . ......+.+|+.+++.++|++|+..+.++......
T Consensus 333 ~~~~~~~~iG~G~~g~Vy~~~~~~~-~~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~ 411 (535)
T PRK09605 333 RRKIPDHLIGKGAEADIKKGEYLGR-DAVIKERVPKGYRHPELDERLRTERTRAEARLLSEARRAGVPTPVIYDVDPEEK 411 (535)
T ss_pred cccCccceeccCCcEEEEEEeecCc-cceeEEEecccccchhHHHHHHHHHHHHHHHHHHhhcccCCCeeEEEEEeCCCC
Confidence 3456688999999999999987654 444444322211 1 12235688999999999999998887777777788
Q ss_pred EEEEEecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCcc
Q 003963 579 CIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRL 655 (783)
Q Consensus 579 ~lV~E~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~ 655 (783)
++||||++|++|.+++. ....++.+++.+|.+||+.+ |+||||||+|||+ .++.++|+|||+++.
T Consensus 412 ~lv~E~~~g~~L~~~l~---------~~~~~~~~i~~~L~~lH~~g--iiHrDlkp~NILl-~~~~~~liDFGla~~ 476 (535)
T PRK09605 412 TIVMEYIGGKDLKDVLE---------GNPELVRKVGEIVAKLHKAG--IVHGDLTTSNFIV-RDDRLYLIDFGLGKY 476 (535)
T ss_pred EEEEEecCCCcHHHHHH---------HHHHHHHHHHHHHHHHHhCC--CccCCCChHHEEE-ECCcEEEEeCccccc
Confidence 99999999999999885 24568889999999999998 9999999999999 577999999999865
No 431
>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]
Probab=99.63 E-value=2.4e-16 Score=173.18 Aligned_cols=169 Identities=27% Similarity=0.375 Sum_probs=127.8
Q ss_pred ceEEEEEecCCCCHHHHHhh--cCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCc
Q 003963 577 RLCIVTEFLPRGSLFRLLQR--NTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSR 654 (783)
Q Consensus 577 ~~~lV~E~~~ggsL~~~L~~--~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~ 654 (783)
++||.|++|...+|.++|.+ .....++...+.++.|++.|+.| ++ .+|+|+||.||++..+..+||.|||+..
T Consensus 330 ~lyI~Mn~c~~~tledWl~rr~~~e~~s~s~~~~~~~q~~~~~~y---k~--~ihrdlkp~nif~~~d~q~kIgDFgl~t 404 (516)
T KOG1033|consen 330 YLYIQMNLCEKETLEDWLRRRRTGEERSLSLMLDIFKQIAPAVEY---KG--LIHRDLKPSNIFFSDDDQLKIGDFGLVT 404 (516)
T ss_pred chhhhhhhhhhhhHHHHhhCCCcccccchhHHHHHHHhhccchhh---cc--chhhhccccccccccchhhhhhhhhhee
Confidence 58999999999999999964 33446778888999999999999 56 9999999999999999999999999976
Q ss_pred cccccc------ccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCChHHHHHHhhcccccccC
Q 003963 655 LKHETY------LTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELAT-EKIPWDNLNSMQVIGAVGFMNQRLEI 727 (783)
Q Consensus 655 ~~~~~~------~~~~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~~~ 727 (783)
...... ......+||..||+||.+.+..|+.++|||+||++|+|++. -..+|+.. ..+..+......+.+
T Consensus 405 s~~~~~~~~~~~a~~t~~~gt~~YmsPEQi~g~~y~~kvdIyaLGlil~EL~~~f~T~~er~---~t~~d~r~g~ip~~~ 481 (516)
T KOG1033|consen 405 SQDKDETVAPAAASHTQQVGTLLYMSPEQIRGQQYSEKVDIYALGLILAELLIQFSTQFERI---ATLTDIRDGIIPPEF 481 (516)
T ss_pred ecccCCcccchhhhhhhcccccccCCHHHHhhhhhhhhcchhhHHHHHHHHHHHhccHHHHH---HhhhhhhcCCCChHH
Confidence 544332 12334579999999999999999999999999999999998 33333221 111122111111111
Q ss_pred CCCCCHHHHHHHHHhhhhCCCCCCCHH
Q 003963 728 PKDVDPRWAAIVESCWHSDPQCRPSFQ 754 (783)
Q Consensus 728 ~~~~s~~l~~LI~~cL~~dP~~RPsa~ 754 (783)
..+ .++-..|+.+||.+.|.+||++.
T Consensus 482 ~~d-~p~e~~ll~~lls~~p~~RP~~~ 507 (516)
T KOG1033|consen 482 LQD-YPEEYTLLQQLLSPSPEERPSAI 507 (516)
T ss_pred hhc-CcHHHHHHHHhcCCCcccCchHH
Confidence 122 24456899999999999999443
No 432
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.62 E-value=2e-17 Score=192.84 Aligned_cols=249 Identities=24% Similarity=0.345 Sum_probs=198.9
Q ss_pred ceeEeeeeccCCcEEEEEEEEeCCc--eEEEEEEecccCCHHHHHHHHHHHHHHHhCC-CCceeeEeceeecCCceEEEE
Q 003963 506 DLTIGEQIGQGSCGTVYHAVWYGSQ--DVAVKVFSRQEYSDEVIHSFRQEVSLMKRLR-HPNVLLFMGAVTSPQRLCIVT 582 (783)
Q Consensus 506 ~y~i~~~LG~G~fG~Vy~a~~~~~~--~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~-HpnIv~l~~~~~~~~~~~lV~ 582 (783)
.|.+.+.||+|+|+.|-........ .+|.|.+...............|..+-+.+. |.|++.+++........++++
T Consensus 21 ~~~~~~~ig~gs~~~~~~~~~~~~~~~~~a~~~~s~~~~~~~~~~~i~~e~~~~~~~s~h~n~~~~~~~~~~~~~~~~~~ 100 (601)
T KOG0590|consen 21 QYKLSRSIGKGSFSSSALASNSRDPESSSATKPISIPPKSEDSSEHIDTETDIQKKLSKHSNTVHMIEPSSSPRSYLLSL 100 (601)
T ss_pred cccccccccccccchhhhhhhcCCCcceeeccCCCCCCCccchhhhcCccccccccccccccccccCCccCCCccccccc
Confidence 4667778999999999988764443 3677766655444555566777888888887 999999999999999999999
Q ss_pred EecCCCCHHHHH-hhcCCcchHHHHHHHHHHHHHHHHHHH-hCCCCEEecCCCCCCEEEcCCC-cEEEEecCCCccccc-
Q 003963 583 EFLPRGSLFRLL-QRNTTKLDWRRRILMALDIARGVSYLH-HCNPPIIHRDLKSSNLLVDKHW-TVKVGDFGLSRLKHE- 658 (783)
Q Consensus 583 E~~~ggsL~~~L-~~~~~~l~~~~~~~i~~qi~~aL~~LH-~~~~~IvHrDIKp~NILl~~~~-~vkL~DFGla~~~~~- 658 (783)
+|..|++++..+ .......+...+..++.|+..++.|+| ..+ +.|+||||+|.+++..+ .+++.|||+|..+..
T Consensus 101 ~~s~g~~~f~~i~~~~~~~~~~~~~~~~~~ql~s~l~~~H~~~~--~~h~~ikP~n~~l~~s~~~l~~~df~~At~~~~~ 178 (601)
T KOG0590|consen 101 SYSDGGSLFSKISHPDSTGTSSSSASRYLPQLNSGLSYLHPENG--VTHRDIKPSNSLLDESGSALKIADFGLATAYRNK 178 (601)
T ss_pred CcccccccccccccCCccCCCCcchhhhhhhhccCccccCcccc--cccCCCCCccchhccCCCcccCCCchhhcccccc
Confidence 999999999988 443335677778888999999999999 887 99999999999999999 999999999986554
Q ss_pred c--cccccCCCC-CCcccCcccccCC-CCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHH--hhcc-cccccCCCCC
Q 003963 659 T--YLTTKTGKG-TPQWMAPEVLRNE-PSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGA--VGFM-NQRLEIPKDV 731 (783)
Q Consensus 659 ~--~~~~~~~~G-t~~Y~aPE~~~~~-~~s~~sDIwSLG~il~elltG~~Pf~~~~~~~~~~~--i~~~-~~~~~~~~~~ 731 (783)
. .......+| ++.|+|||.+.+. ......|+||+|+++.-+++|..||........... .... .........+
T Consensus 179 ~g~~~~~~~~~g~s~~y~a~E~~~~~~~~~~~~d~~S~g~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (601)
T KOG0590|consen 179 NGAERSLKDRCGSSPPYGAPEHLSGKAYRGPSVDVWSLGIVLSAMLTGELPWDFPSRKDGRYSSWKSNKGRFTQLPWNSI 258 (601)
T ss_pred CCcceeeecccCCCCCCCCcccccchhhcCCCcccccccccccccccCCCCccccccccccceeecccccccccCccccC
Confidence 2 223345578 9999999999885 457889999999999999999999976554332111 1111 1124455678
Q ss_pred CHHHHHHHHHhhhhCCCCCCCHHHH
Q 003963 732 DPRWAAIVESCWHSDPQCRPSFQEL 756 (783)
Q Consensus 732 s~~l~~LI~~cL~~dP~~RPsa~el 756 (783)
+....+++.+++..+|..|.+..++
T Consensus 259 ~~~~~~~l~k~l~~~~~~r~s~~~~ 283 (601)
T KOG0590|consen 259 SDQAHDLLHKILKENPSNRLSIEEL 283 (601)
T ss_pred ChhhhhcccccccCCchhccccccc
Confidence 8899999999999999999999888
No 433
>cd05119 RIO RIO kinase family, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct
Probab=99.61 E-value=3.5e-15 Score=149.48 Aligned_cols=138 Identities=25% Similarity=0.229 Sum_probs=98.1
Q ss_pred eeeeccCCcEEEEEEEEeCCceEEEEEEecccCCHHHHHH----------------------HHHHHHHHHhCCCCc--e
Q 003963 510 GEQIGQGSCGTVYHAVWYGSQDVAVKVFSRQEYSDEVIHS----------------------FRQEVSLMKRLRHPN--V 565 (783)
Q Consensus 510 ~~~LG~G~fG~Vy~a~~~~~~~vAiK~i~~~~~~~~~~~~----------------------~~~Ei~il~~l~Hpn--I 565 (783)
.+.||+|+||.||+|.+..++.||||++............ ...|...+..+.+.. +
T Consensus 2 ~~~lg~G~~g~Vy~a~~~~~~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~ 81 (187)
T cd05119 2 GGPIGTGKEADVYLALDGDGEPVAVKIYRTGRTSFKKRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNLKRLYEAGVPV 81 (187)
T ss_pred CcccccccceeEEEEECCCCCEEEEEEEecCccchhhhhhhhHHHHHhccCCcchhhhhhHHHHHHHHHHHHHHHcCCCC
Confidence 5689999999999999877789999998764332111111 134566666654332 4
Q ss_pred eeEeceeecCCceEEEEEecCCCCHH-HHHhhcCCcchHHHHHHHHHHHHHHHHHHHh-CCCCEEecCCCCCCEEEcCCC
Q 003963 566 LLFMGAVTSPQRLCIVTEFLPRGSLF-RLLQRNTTKLDWRRRILMALDIARGVSYLHH-CNPPIIHRDLKSSNLLVDKHW 643 (783)
Q Consensus 566 v~l~~~~~~~~~~~lV~E~~~ggsL~-~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~-~~~~IvHrDIKp~NILl~~~~ 643 (783)
.+++++ ...++||||++++.+. ..+.... . ...+..++.+++.++.++|. .+ |+|+||||+||+++ ++
T Consensus 82 ~~~~~~----~~~~lv~e~~~g~~~~~~~l~~~~--~-~~~~~~~~~~~~~~l~~lh~~~~--ivH~Dl~p~Nili~-~~ 151 (187)
T cd05119 82 PKPIDL----NRHVLVMEFIGGDGIPAPRLKDVR--L-LEDPEELYDQILELMRKLYREAG--LVHGDLSEYNILVD-DG 151 (187)
T ss_pred CceEec----CCCEEEEEEeCCCCccChhhhhhh--h-cccHHHHHHHHHHHHHHHhhccC--cCcCCCChhhEEEE-CC
Confidence 444443 2468999999985432 1121111 1 15677889999999999999 88 99999999999999 88
Q ss_pred cEEEEecCCCcccc
Q 003963 644 TVKVGDFGLSRLKH 657 (783)
Q Consensus 644 ~vkL~DFGla~~~~ 657 (783)
.++|+|||.+....
T Consensus 152 ~~~liDfg~a~~~~ 165 (187)
T cd05119 152 KVYIIDVPQAVEID 165 (187)
T ss_pred cEEEEECccccccc
Confidence 99999999986443
No 434
>PF08448 PAS_4: PAS fold; InterPro: IPR013656 The PAS fold corresponds to the structural domain that has previously been defined as PAS and PAC motifs []. The PAS fold appears in archaea, eubacteria and eukarya. ; PDB: 3K3D_A 3K3C_B 3KX0_X 3FC7_B 3LUQ_D 3MXQ_A 3BWL_C 3FG8_A.
Probab=99.60 E-value=9.6e-15 Score=131.84 Aligned_cols=110 Identities=24% Similarity=0.357 Sum_probs=99.0
Q ss_pred HHHhCcceEEEcCCCcEEEecHHHHHHcCCChhhHcCCCccccccccccchHHHHHHHHHHhCCeEEEEEEEEcCCCCEE
Q 003963 136 LQSMGQSVHIFDLSDRIIYWNRSAELLYGYSAEEALGQDAIELLTDGRDFDVAYDIVHRIKMGERWTGQFPAKTKTEERV 215 (783)
Q Consensus 136 le~~~d~I~i~D~~G~Ii~~N~aae~L~Gys~eEllG~~~~~l~~~~~~~~~~~~l~~~l~~g~~~~~e~~~~~kdG~~~ 215 (783)
|++++++|+++|.+|+|+++|+++++++|++.++++|+++.+++++.........+.+++..+.....+..... +|..+
T Consensus 1 l~~~p~~i~v~D~~~~i~~~N~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 79 (110)
T PF08448_consen 1 LDSSPDGIFVIDPDGRIVYANQAAAELFGVSPEELIGRSLFDLLPPEDREEFQAALRRALAGGEPVFFEEILLR-DGEER 79 (110)
T ss_dssp HHHCSSEEEEEETTSBEEEE-HHHHHHHTSTHHHHTTSBHHHHSCCGCHHHHHHHHHHHHHHTSEEEEEEEECT-TSCEE
T ss_pred CCCCCceeEEECCCCEEEEEHHHHHHHhCCCHHHHhhccchhccccchhhhhHHHHHHhhccCceEEEEEEEee-cCCcE
Confidence 68999999999999999999999999999999999999999999887666666778888888888776665555 89999
Q ss_pred EEEEEEEEEECCCCCEEEEEEEEEehHHHHH
Q 003963 216 LVVATNTPFYDDDGTLVGIVCVSTDSRPFQE 246 (783)
Q Consensus 216 ~v~~~~~Pi~d~~G~v~g~v~i~rDITerk~ 246 (783)
|+.+++.|++|.+|++.|++++++|||++|+
T Consensus 80 ~~~~~~~Pi~~~~g~~~g~~~~~~DiT~~rr 110 (110)
T PF08448_consen 80 WFEVSISPIFDEDGEVVGVLVIIRDITERRR 110 (110)
T ss_dssp EEEEEEEEEECTTTCEEEEEEEEEEECCHHH
T ss_pred EEEEEEEEeEcCCCCEEEEEEEEEECchhhC
Confidence 9999999999999999999999999999985
No 435
>PF00989 PAS: PAS fold; InterPro: IPR013767 PAS domains are involved in many signalling proteins where they are used as a signal sensor domain []. PAS domains appear in archaea, bacteria and eukaryotes. Several PAS-domain proteins are known to detect their signal by way of an associated cofactor. Haeme, flavin, and a 4-hydroxycinnamyl chromophore are used in different proteins. The PAS domain was named after three proteins that it occurs in: Per- period circadian protein Arnt- Ah receptor nuclear translocator protein Sim- single-minded protein. PAS domains are often associated with PAC domains IPR001610 from INTERPRO. It appears that these domains are directly linked, and that together they form the conserved 3D PAS fold. The division between the PAS and PAC domains is caused by major differences in sequences in the region connecting these two motifs []. In human PAS kinase, this region has been shown to be very flexible, and adopts different conformations depending on the bound ligand []. Probably the most surprising identification of a PAS domain was that in EAG-like K+-channels [].; GO: 0006355 regulation of transcription, DNA-dependent; PDB: 2GJ3_A 4F3L_B 1XFN_A 1OTD_A 2PYR_A 1KOU_A 1XFQ_A 2ZOI_A 2ZOH_A 1OTA_A ....
Probab=99.59 E-value=1.4e-14 Score=131.45 Aligned_cols=112 Identities=25% Similarity=0.450 Sum_probs=95.8
Q ss_pred HHHHHHHHHhCcceEEEcCCCcEEEecHHHHHHcCCChhhHcCCCccccccccccchHHHHHHHHHHhCCeEEE-EEEEE
Q 003963 130 RQYLNILQSMGQSVHIFDLSDRIIYWNRSAELLYGYSAEEALGQDAIELLTDGRDFDVAYDIVHRIKMGERWTG-QFPAK 208 (783)
Q Consensus 130 ~~~~~ile~~~d~I~i~D~~G~Ii~~N~aae~L~Gys~eEllG~~~~~l~~~~~~~~~~~~l~~~l~~g~~~~~-e~~~~ 208 (783)
++|+.++++++++|+++|.+|+|+|+|++|++++||+.++++|+++.++++++........+.+.+..++.... .....
T Consensus 1 e~~~~i~~~~~~~i~~~d~~g~I~~~N~a~~~l~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (113)
T PF00989_consen 1 ERYRAILENSPDGIFVIDEDGRILYVNQAAEELLGYSREELIGKSLFDLIHPEDRRELRERLRQALSQGESGESFEVRFR 80 (113)
T ss_dssp HHHHHHHHCSSSEEEEEETTSBEEEECHHHHHHHSS-HHHHTTSBGGGGCSGGGHHHHHHHHHHHHHHCCHECEEEEEEE
T ss_pred CHHHHHHhcCCceEEEEeCcCeEEEECHHHHHHHccCHHHHcCCcHHHhcCchhhHHHHHHHHHHHHcCCCceeEEEEEE
Confidence 57999999999999999999999999999999999999999999999999877654455567777777776333 44444
Q ss_pred cCCCCEEEEEEEEEEEECCCCCEEEEEEEEEeh
Q 003963 209 TKTEERVLVVATNTPFYDDDGTLVGIVCVSTDS 241 (783)
Q Consensus 209 ~kdG~~~~v~~~~~Pi~d~~G~v~g~v~i~rDI 241 (783)
.++|..+|+.+.+.|+++.+|++.|++++++||
T Consensus 81 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~DI 113 (113)
T PF00989_consen 81 LRDGRPRWVEVRASPVRDEDGQIIGILVIFRDI 113 (113)
T ss_dssp ETTSCEEEEEEEEEEEEETTEEEEEEEEEEEE-
T ss_pred ecCCcEEEEEEEEEEEEeCCCCEEEEEEEEEeC
Confidence 479999999999999999999999999999997
No 436
>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family. The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves
Probab=99.57 E-value=2e-14 Score=136.87 Aligned_cols=134 Identities=19% Similarity=0.177 Sum_probs=111.0
Q ss_pred EeeeeccCCcEEEEEEEEeCCceEEEEEEecccCCHHHHHHHHHHHHHHHhCCC--CceeeEeceeecCCceEEEEEecC
Q 003963 509 IGEQIGQGSCGTVYHAVWYGSQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRH--PNVLLFMGAVTSPQRLCIVTEFLP 586 (783)
Q Consensus 509 i~~~LG~G~fG~Vy~a~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~H--pnIv~l~~~~~~~~~~~lV~E~~~ 586 (783)
+.+.||.|.++.||++...+ ..+++|++..... ...+..|+.+++.+.| .++++++.++...+..+++|||++
T Consensus 2 ~~~~i~~g~~~~v~~~~~~~-~~~~iK~~~~~~~----~~~~~~e~~~~~~l~~~~~~~p~~~~~~~~~~~~~~v~e~~~ 76 (155)
T cd05120 2 SIKLLKGGLTNRVYLLGTKD-EDYVLKINPSREK----GADREREVAILQLLARKGLPVPKVLASGESDGWSYLLMEWIE 76 (155)
T ss_pred cceecccccccceEEEEecC-CeEEEEecCCCCc----hhHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCccEEEEEecC
Confidence 45789999999999999765 6899999865432 3567889999999976 589999998888888999999998
Q ss_pred CCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCC-CCEEecCCCCCCEEEcCCCcEEEEecCCCcc
Q 003963 587 RGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCN-PPIIHRDLKSSNLLVDKHWTVKVGDFGLSRL 655 (783)
Q Consensus 587 ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~-~~IvHrDIKp~NILl~~~~~vkL~DFGla~~ 655 (783)
++.+..+ +......++.+++.+|++||... .+++|+|++|.|||+++.+.++++|||.+..
T Consensus 77 g~~~~~~--------~~~~~~~~~~~~~~~l~~lh~~~~~~i~H~Dl~~~Nil~~~~~~~~l~Df~~~~~ 138 (155)
T cd05120 77 GETLDEV--------SEEEKEDIAEQLAELLAKLHQLPLLVLCHGDLHPGNILVDDGKILGIIDWEYAGY 138 (155)
T ss_pred CeecccC--------CHHHHHHHHHHHHHHHHHHhCCCceEEEecCCCcceEEEECCcEEEEEecccccC
Confidence 8777554 34455667889999999999852 2399999999999999989999999998864
No 437
>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed
Probab=99.55 E-value=3.8e-14 Score=148.06 Aligned_cols=136 Identities=20% Similarity=0.213 Sum_probs=103.1
Q ss_pred eeec-cCCcEEEEEEEEeCCceEEEEEEecccC-----------CHHHHHHHHHHHHHHHhCCCCce--eeEeceeecCC
Q 003963 511 EQIG-QGSCGTVYHAVWYGSQDVAVKVFSRQEY-----------SDEVIHSFRQEVSLMKRLRHPNV--LLFMGAVTSPQ 576 (783)
Q Consensus 511 ~~LG-~G~fG~Vy~a~~~~~~~vAiK~i~~~~~-----------~~~~~~~~~~Ei~il~~l~HpnI--v~l~~~~~~~~ 576 (783)
..|| .|+.|+||++... ++.++||.+..... .......+.+|+.++..|.|++| +..+++.....
T Consensus 37 ~~lg~~~g~gtv~~v~~~-~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~~~gi~vP~pl~~~~~~~ 115 (239)
T PRK01723 37 RVVGSAKGRGTTWFVQTP-GVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLYEAGLPVPRPIAARVVRH 115 (239)
T ss_pred ceeecCCCCccEEEEEeC-CceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHHhCCCCCceeEeeeeeec
Confidence 4566 7788888888764 56899998854321 11233567889999999998775 66776644322
Q ss_pred ----ceEEEEEecCC-CCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecC
Q 003963 577 ----RLCIVTEFLPR-GSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFG 651 (783)
Q Consensus 577 ----~~~lV~E~~~g-gsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFG 651 (783)
..++||||++| .+|.+++... .++.. .+.+|+.+|.+||+.| |+|+||||.|||++.++.++|+|||
T Consensus 116 ~~~~~~~lV~e~l~G~~~L~~~l~~~--~l~~~----~~~~i~~~l~~lH~~G--I~HrDlkp~NILv~~~~~v~LIDfg 187 (239)
T PRK01723 116 GLFYRADILIERIEGARDLVALLQEA--PLSEE----QWQAIGQLIARFHDAG--VYHADLNAHNILLDPDGKFWLIDFD 187 (239)
T ss_pred CcceeeeEEEEecCCCCCHHHHHhcC--CCCHH----HHHHHHHHHHHHHHCC--CCCCCCCchhEEEcCCCCEEEEECC
Confidence 23599999997 6899888653 34443 2568999999999999 9999999999999998899999999
Q ss_pred CCcc
Q 003963 652 LSRL 655 (783)
Q Consensus 652 la~~ 655 (783)
.+..
T Consensus 188 ~~~~ 191 (239)
T PRK01723 188 RGEL 191 (239)
T ss_pred Cccc
Confidence 8864
No 438
>PRK11091 aerobic respiration control sensor protein ArcB; Provisional
Probab=99.54 E-value=7.1e-14 Score=170.69 Aligned_cols=151 Identities=16% Similarity=0.157 Sum_probs=132.2
Q ss_pred CHHHHHHHHHHhCcceEEEcCCCcEEEecHHHHHHcCCChhhHcCCCccccccccccchHHHHHHHHHHhCCeEEEEEEE
Q 003963 128 TDRQYLNILQSMGQSVHIFDLSDRIIYWNRSAELLYGYSAEEALGQDAIELLTDGRDFDVAYDIVHRIKMGERWTGQFPA 207 (783)
Q Consensus 128 ~~~~~~~ile~~~d~I~i~D~~G~Ii~~N~aae~L~Gys~eEllG~~~~~l~~~~~~~~~~~~l~~~l~~g~~~~~e~~~ 207 (783)
.+++++.++++++++|+++|.+|+|+++|++|++++||+.++++|+++.+++++.............+..+..+..+.+.
T Consensus 153 ~~~~l~~il~~~~~~i~~~D~~g~i~~~N~a~~~l~G~~~~eliG~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~e~~~ 232 (779)
T PRK11091 153 QSSLLRSFLDASPDLVYYRNEDGEFSGCNRAMELLTGKSEKQLIGLTPKDVYSPEAAEKVIETDEKVFRHNVSLTYEQWL 232 (779)
T ss_pred HHHHHHHHHhcCcceEEEECCCCcEEeEcHHHHHHhCcCHHHHcCCChHHhCCHHHHHHHHHHHHHHHhcCCCeEEEEEE
Confidence 34679999999999999999999999999999999999999999999999988765444444556677788888888888
Q ss_pred EcCCCCEEEEEEEEEEEECCCCCEEEEEEEEEehHHHHHHHHHHHHhhccccccccCCchhHHHHhhcCCchhHHHHHHH
Q 003963 208 KTKTEERVLVVATNTPFYDDDGTLVGIVCVSTDSRPFQETRAALWDTKNSDTDSNINRPRNTVTAKLGLDSQQPLQATIA 287 (783)
Q Consensus 208 ~~kdG~~~~v~~~~~Pi~d~~G~v~g~v~i~rDITerk~~E~~L~~~~~~~~~~~~~~~~~~l~~~l~~d~~qpl~~~i~ 287 (783)
.+++|..+|+.++..|+++.+|++.|++++++|||++|+++++++.... .+..|++.++||+++||+.++.
T Consensus 233 ~~~~G~~~~~~~~~~pi~~~~g~~~g~v~~~~DITe~k~~e~~l~~a~~---------~~~~~~a~isHelrtPL~~I~g 303 (779)
T PRK11091 233 DYPDGRKACFELRKVPFYDRVGKRHGLMGFGRDITERKRYQDALEKASR---------DKTTFISTISHELRTPLNGIVG 303 (779)
T ss_pred EcCCCCEEEEEEEeeeEEcCCCCEEEEEEEEeehhHHHHHHHHHHHHHH---------HHHHHHHHhhHhhcCcHHHHHH
Confidence 9999999999999999999999999999999999999999998876543 3456999999999999987643
No 439
>PRK13557 histidine kinase; Provisional
Probab=99.51 E-value=2.2e-13 Score=158.57 Aligned_cols=150 Identities=18% Similarity=0.230 Sum_probs=129.5
Q ss_pred HHHHHHHHHHhCcceEEEcC---CCcEEEecHHHHHHcCCChhhHcCCCccccccccccchHHHHHHHHHHhCCeEEEEE
Q 003963 129 DRQYLNILQSMGQSVHIFDL---SDRIIYWNRSAELLYGYSAEEALGQDAIELLTDGRDFDVAYDIVHRIKMGERWTGQF 205 (783)
Q Consensus 129 ~~~~~~ile~~~d~I~i~D~---~G~Ii~~N~aae~L~Gys~eEllG~~~~~l~~~~~~~~~~~~l~~~l~~g~~~~~e~ 205 (783)
...|..+++.++++|+++|. +|+|+|+|++|++++||+.+|++|+++.++++++........++..+..+..+..++
T Consensus 29 ~~~~~~~~~~~~~~i~v~d~~~~~g~i~~~N~a~~~~~G~~~~e~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 108 (540)
T PRK13557 29 SDIFFAAVETTRMPMIVTDPNQPDNPIVFANRAFLEMTGYAAEEIIGNNCRFLQGPETDRATVAEVRDAIAERREIATEI 108 (540)
T ss_pred hHHHHHHHHhCcCcEEEEcCCCCCCCEEEEcHHHHHHhCCCHHHhcCCChHhhcCCCCCHHHHHHHHHHHHcCCCceEEE
Confidence 57899999999999999995 789999999999999999999999999999887766666667788888888888888
Q ss_pred EEEcCCCCEEEEEEEEEEEECCCCCEEEEEEEEEehHHHHHHHHHHHHhhccccccccCCchhHHHHhhcCCchhHHHHH
Q 003963 206 PAKTKTEERVLVVATNTPFYDDDGTLVGIVCVSTDSRPFQETRAALWDTKNSDTDSNINRPRNTVTAKLGLDSQQPLQAT 285 (783)
Q Consensus 206 ~~~~kdG~~~~v~~~~~Pi~d~~G~v~g~v~i~rDITerk~~E~~L~~~~~~~~~~~~~~~~~~l~~~l~~d~~qpl~~~ 285 (783)
..++++|..+|+.+++.|+++.+|.+++++++.+|||+++++++++....... ....+...++|+++.||+..
T Consensus 109 ~~~~~~G~~~~~~~~~~~i~~~~g~~~~~~~~~~dit~~~~~e~~l~~~~~~~-------~l~~~~~~i~h~l~~pl~~i 181 (540)
T PRK13557 109 LNYRKDGSSFWNALFVSPVYNDAGDLVYFFGSQLDVSRRRDAEDALRQAQKME-------ALGQLTGGIAHDFNNLLQVM 181 (540)
T ss_pred EEEeCCCCEEEEEEEEEEeECCCCCEEEEEEEecChHHHHHHHHHHHHHHHHH-------HhhhhhhhhhHHhhhHHHHH
Confidence 88899999999999999999999999999999999999999998876543321 12236778889999999753
No 440
>PRK13559 hypothetical protein; Provisional
Probab=99.50 E-value=3.6e-13 Score=149.20 Aligned_cols=144 Identities=19% Similarity=0.170 Sum_probs=121.6
Q ss_pred HHHHHHHHHHhCcceEEEcC---CCcEEEecHHHHHHcCCChhhHcCCCccccccccccchHHHHHHHHHHhCCeEEEEE
Q 003963 129 DRQYLNILQSMGQSVHIFDL---SDRIIYWNRSAELLYGYSAEEALGQDAIELLTDGRDFDVAYDIVHRIKMGERWTGQF 205 (783)
Q Consensus 129 ~~~~~~ile~~~d~I~i~D~---~G~Ii~~N~aae~L~Gys~eEllG~~~~~l~~~~~~~~~~~~l~~~l~~g~~~~~e~ 205 (783)
.+.|+.+++..+++|+++|. +|.|+++|++|++++||+.++++|+++..+.++.........+...+..+..+..+.
T Consensus 42 ~~~~~~~~e~~~~~i~i~D~~~~~g~i~~~N~a~~~l~G~~~~e~iG~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~e~ 121 (361)
T PRK13559 42 GRLFEQAMEQTRMAMCITDPHQPDLPIVLANQAFLDLTGYAAEEVVGRNCRFLQGAATDPIAVAKIRAAIAAEREIVVEL 121 (361)
T ss_pred hhHHHHHHHhCCCcEEEecCCCCCCcEEEEchHHHHHhCCCHHHHcCCChhhhcCCCCCHHHHHHHHHHhccCCceEEEE
Confidence 46789999999999999997 578999999999999999999999999877765554444556677788888888888
Q ss_pred EEEcCCCCEEEEEEEEEEEECCCCCEEEEEEEEEehHHHHHHHHHHHHhhccccccccCCchhHHHHhhcCCchhHHHHH
Q 003963 206 PAKTKTEERVLVVATNTPFYDDDGTLVGIVCVSTDSRPFQETRAALWDTKNSDTDSNINRPRNTVTAKLGLDSQQPLQAT 285 (783)
Q Consensus 206 ~~~~kdG~~~~v~~~~~Pi~d~~G~v~g~v~i~rDITerk~~E~~L~~~~~~~~~~~~~~~~~~l~~~l~~d~~qpl~~~ 285 (783)
..+++||..+|+.++..|+++.+|.+.+++++++|||++|++++..+.. ..++..++|+.+.||+.+
T Consensus 122 ~~~~~dG~~~~~~~~~~~i~d~~G~~~~~v~~~~DITerk~~e~~~~~~-------------~~l~~~l~H~~~n~L~~i 188 (361)
T PRK13559 122 LNYRKDGEPFWNALHLGPVYGEDGRLLYFFGSQWDVTDIRAVRALEAHE-------------RRLAREVDHRSKNVFAVV 188 (361)
T ss_pred EEEcCCCCEEEEEEEEEEEEcCCCCEEEeeeeeeehhcchhhHHHHHHH-------------HHHHHHHHHhhhhHHHHH
Confidence 8899999999999999999999999999999999999999887654332 226677788888888653
No 441
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.43 E-value=2.5e-13 Score=152.25 Aligned_cols=247 Identities=21% Similarity=0.171 Sum_probs=184.4
Q ss_pred ccceeEeeeecc--CCcEEEEEEEE--e-CCceEEEEEEecccCCHHHHHHHHHHHHHHHhCC-CCceeeEeceeecCCc
Q 003963 504 WEDLTIGEQIGQ--GSCGTVYHAVW--Y-GSQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLR-HPNVLLFMGAVTSPQR 577 (783)
Q Consensus 504 ~~~y~i~~~LG~--G~fG~Vy~a~~--~-~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~-HpnIv~l~~~~~~~~~ 577 (783)
...+.+.+.+|. |.+|.||.+.. . ....+|+|.=+...........-.+|+.-.+.++ |+|.|+.+..|+..+.
T Consensus 113 ~~~~~~~~~~g~~~g~~~s~~~~~~~~~~s~~~~a~k~s~~p~s~p~~~~~k~~~~~s~~~i~~~~~~v~~~~~~e~~~~ 192 (524)
T KOG0601|consen 113 DQRFPISSRTGSLPGSKGSVFKSRCTNSESPHKFAVKKSKIPFSPPLDSKRKLREFLSHHKIDSHENPVRDSPAWEGSGI 192 (524)
T ss_pred hhhcccccccccCCCCCceeecccCCcccCCcccccccccCCCCCccccccccchhhcccccCccccccccCcccccCCc
Confidence 346778889999 99999999987 3 2356888873222211111122235666666665 9999999999999999
Q ss_pred eEEEEEecCCCCHHHHHhhcCCcchHHHHHHHHHHHHH----HHHHHHhCCCCEEecCCCCCCEEEcCC-CcEEEEecCC
Q 003963 578 LCIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIAR----GVSYLHHCNPPIIHRDLKSSNLLVDKH-WTVKVGDFGL 652 (783)
Q Consensus 578 ~~lV~E~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~----aL~~LH~~~~~IvHrDIKp~NILl~~~-~~vkL~DFGl 652 (783)
+|+-+|+| +.+|..+.......++...++....+... ||.++|..+ ++|-|+||+||++..+ ...+++|||+
T Consensus 193 lfiqtE~~-~~sl~~~~~~~~~~~p~~~l~~~~~~~~~~~~~al~~~hs~~--~~~~~~kp~~i~~~~~~~s~~~~df~~ 269 (524)
T KOG0601|consen 193 LFIQTELC-GESLQSYCHTPCNFLPDNLLWNSLRDWLSRDVTALSHLHSNN--IVHDDLKPANIFTTSDWTSCKLTDFGL 269 (524)
T ss_pred ceeeeccc-cchhHHhhhcccccCCchhhhhHHhhhhhcccccccccCCCc--ccccccchhheecccccceeecCCcce
Confidence 99999999 56888888766666888889999999999 999999998 9999999999999998 7899999999
Q ss_pred CcccccccccccC-----CCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCC--ChHHHHHHhhcccccc
Q 003963 653 SRLKHETYLTTKT-----GKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNL--NSMQVIGAVGFMNQRL 725 (783)
Q Consensus 653 a~~~~~~~~~~~~-----~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~elltG~~Pf~~~--~~~~~~~~i~~~~~~~ 725 (783)
...+......... ..|...|++||..++. ++...|||+||.++.+..++..+.... +....+.. .....
T Consensus 270 v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l-~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~W~~~r~---~~ip~ 345 (524)
T KOG0601|consen 270 VSKISDGNFSSVFKVSKRPEGDCIYAAKELLNGL-ATFASDIFSLGEVILEAILGSHLPSVGKNSSWSQLRQ---GYIPL 345 (524)
T ss_pred eEEccCCccccceeeeecCCCCceEeChhhhccc-cchHhhhcchhhhhHhhHhhcccccCCCCCCcccccc---ccCch
Confidence 8776654422222 2688899999998665 668999999999999999886554322 11111111 11122
Q ss_pred cCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHH
Q 003963 726 EIPKDVDPRWAAIVESCWHSDPQCRPSFQELV 757 (783)
Q Consensus 726 ~~~~~~s~~l~~LI~~cL~~dP~~RPsa~ell 757 (783)
++....+.++...+..|+..+|..|++++.+.
T Consensus 346 e~~~~~s~~l~~~~~~~~d~~~~~~~~~q~~~ 377 (524)
T KOG0601|consen 346 EFCEGGSSSLRSVTSQMLDEDPRLRLTAQILT 377 (524)
T ss_pred hhhcCcchhhhhHHHHhcCcchhhhhHHHHHh
Confidence 33344566778899999999999999887774
No 442
>KOG1243 consensus Protein kinase [General function prediction only]
Probab=99.40 E-value=5.4e-12 Score=142.69 Aligned_cols=222 Identities=20% Similarity=0.234 Sum_probs=148.6
Q ss_pred CCceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEeceeecCCceEEEEEecCCCCHHHHHhhcCCcchHHHHH
Q 003963 528 GSQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIVTEFLPRGSLFRLLQRNTTKLDWRRRI 607 (783)
Q Consensus 528 ~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lV~E~~~ggsL~~~L~~~~~~l~~~~~~ 607 (783)
.+.+|.|++.+.... .......+-+..|+.|+||||++|+..++..+.+|||+|.+ ..|..++... ....+.
T Consensus 36 ~~~~vsVF~~~~~~~--~~~~~~~~A~k~lKtlRHP~Il~yL~t~e~~~~~ylvTErV--~Pl~~~lk~l----~~~~v~ 107 (690)
T KOG1243|consen 36 DGGPVSVFVYKRSNG--EVTELAKRAVKRLKTLRHPNILSYLDTTEEEGTLYLVTERV--RPLETVLKEL----GKEEVC 107 (690)
T ss_pred cCCceEEEEEeCCCc--hhhHHHHHHHHHhhhccCchhhhhhhhhcccCceEEEeecc--ccHHHHHHHh----HHHHHH
Confidence 356788887766554 45566778899999999999999999999999999999998 3687777653 355666
Q ss_pred HHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCcccccccccccCCCCCCcccCcccccCCCCCchh
Q 003963 608 LMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETYLTTKTGKGTPQWMAPEVLRNEPSDEKS 687 (783)
Q Consensus 608 ~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~s~~s 687 (783)
..+.||+.||.|||..+ +++|++|...-|+|+..|..||++|-++..............--..|..|+.+.... -..
T Consensus 108 ~Gl~qIl~AL~FL~~d~-~lvHgNv~~~SVfVn~~GeWkLggle~v~~~~~~~~~~~~~~~~~s~~~P~~~~~s~--~s~ 184 (690)
T KOG1243|consen 108 LGLFQILAALSFLNDDC-NLVHGNVCKDSVFVNESGEWKLGGLELVSKASGFNAPAKSLYLIESFDDPEEIDPSE--WSI 184 (690)
T ss_pred HHHHHHHHHHHHHhccC-CeeeccEeeeeEEEcCCCcEEEeeeEEEeccccCCcccccchhhhcccChhhcCccc--cch
Confidence 77889999999998432 399999999999999999999999988754333221111222233466676654333 457
Q ss_pred HHHHHHHHHHHHHcCCCCCC------CCChHHHHHHhhcccccccCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHH
Q 003963 688 DVYSFGVILWELATEKIPWD------NLNSMQVIGAVGFMNQRLEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLR 761 (783)
Q Consensus 688 DIwSLG~il~elltG~~Pf~------~~~~~~~~~~i~~~~~~~~~~~~~s~~l~~LI~~cL~~dP~~RPsa~ell~~L~ 761 (783)
|.|.|||++++++.|..+-. +..+....... .....-.....+...+++..|...-+--|=.+-+++..|+
T Consensus 185 D~~~Lg~li~el~ng~~~~~~~~~~~~~ipk~~~~~~---~k~~~~~~~~r~n~~~~~~~~~~~~gff~n~fvd~~~fLe 261 (690)
T KOG1243|consen 185 DSWGLGCLIEELFNGSLLTKTDLSNTGKIPKALIELY---CKKLGATELKRPNKLRFILECRLLGGFFRNDFVDTLLFLE 261 (690)
T ss_pred hhhhHHHHHHHHhCcccCcchhhhccCccchhHHHHH---HHHhccccccccchhhHHHHHHhccccccchHHHHHHHHH
Confidence 99999999999999933211 11110000000 0000001111122456677777666666666666666666
Q ss_pred HH
Q 003963 762 DL 763 (783)
Q Consensus 762 ~L 763 (783)
.+
T Consensus 262 el 263 (690)
T KOG1243|consen 262 EL 263 (690)
T ss_pred hc
Confidence 55
No 443
>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase. This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.
Probab=99.35 E-value=4.3e-12 Score=143.89 Aligned_cols=148 Identities=22% Similarity=0.238 Sum_probs=99.7
Q ss_pred cceeEeeeeccCCcEEEEEEEEeCCceEEEEEEecccCCH--------------------------------HHHH----
Q 003963 505 EDLTIGEQIGQGSCGTVYHAVWYGSQDVAVKVFSRQEYSD--------------------------------EVIH---- 548 (783)
Q Consensus 505 ~~y~i~~~LG~G~fG~Vy~a~~~~~~~vAiK~i~~~~~~~--------------------------------~~~~---- 548 (783)
..|. .+.||.|++|.||+|..++++.||||+.+...... +...
T Consensus 118 ~~fd-~~plasaSigQVh~A~l~~G~~VaVKv~rp~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~ 196 (437)
T TIGR01982 118 AEFE-EKPLAAASIAQVHRARLVDGKEVAVKVLRPGIEKTIAADIALLYRLARIVERLSPDSRRLRPTEVVKEFEKTLRR 196 (437)
T ss_pred hhCC-CcceeeeehhheEEEEecCCCEEEEEeeCCCcHHHHHHHHHHHHHHHHHHHHhCccccccCHHHHHHHHHHHHHH
Confidence 3444 36799999999999999888999999986432100 0000
Q ss_pred --HHHHHHHHHHhCC-----CCceeeEeceeecCCceEEEEEecCCCCHHHHHhhcCCcchHHHHHHHHHHHHH-HHHHH
Q 003963 549 --SFRQEVSLMKRLR-----HPNVLLFMGAVTSPQRLCIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIAR-GVSYL 620 (783)
Q Consensus 549 --~~~~Ei~il~~l~-----HpnIv~l~~~~~~~~~~~lV~E~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~-aL~~L 620 (783)
.+.+|+..+.++. +++|.-..-++......+|||||++|++|.++......... ...++..++. .+..+
T Consensus 197 Eldf~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~~~~~~~~~~~~---~~~ia~~~~~~~l~ql 273 (437)
T TIGR01982 197 ELDLRREAANASELGENFKNDPGVYVPEVYWDRTSERVLTMEWIDGIPLSDIAALDEAGLD---RKALAENLARSFLNQV 273 (437)
T ss_pred HHCHHHHHHHHHHHHHhcCCCCCEEeCCEehhhcCCceEEEEeECCcccccHHHHHhcCCC---HHHHHHHHHHHHHHHH
Confidence 2444555555552 34332111122223457999999999999887653221122 2345555555 46788
Q ss_pred HhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCccccc
Q 003963 621 HHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHE 658 (783)
Q Consensus 621 H~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~~ 658 (783)
|..| ++|+|++|.||+++.++.++|+|||++.....
T Consensus 274 ~~~g--~~H~D~hPgNilv~~~g~i~liDfG~~~~l~~ 309 (437)
T TIGR01982 274 LRDG--FFHADLHPGNIFVLKDGKIIALDFGIVGRLSE 309 (437)
T ss_pred HhCC--ceeCCCCcccEEECCCCcEEEEeCCCeeECCH
Confidence 9988 99999999999999999999999999876543
No 444
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=99.35 E-value=2.9e-13 Score=158.41 Aligned_cols=266 Identities=21% Similarity=0.228 Sum_probs=195.1
Q ss_pred ccccccceeEeeeeccCCcEEEEEEEEeCCc-eEEEEEEecccC-CHHHHHHHHHHHHHHHhCCCCceeeEeceeecCCc
Q 003963 500 YEILWEDLTIGEQIGQGSCGTVYHAVWYGSQ-DVAVKVFSRQEY-SDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQR 577 (783)
Q Consensus 500 ~e~~~~~y~i~~~LG~G~fG~Vy~a~~~~~~-~vAiK~i~~~~~-~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~ 577 (783)
|....+.+.+.+.+-.|.++.++.+.-.... -.++|+...... .....+...++-.++-..++|.++....-+.....
T Consensus 799 yrsS~d~~~i~~p~qS~sp~ss~p~~pa~sgh~~~~~v~~~ap~i~~~~~~s~r~~s~~~i~p~~P~v~~~~~s~~~rsP 878 (1205)
T KOG0606|consen 799 YRSSPDGFEITKPSQSGSPSSSFPASPAGSGHTRPSKVHGLAPKIRTNDYESIRSKSNILITPRSPAVVRSFPSFPCRSP 878 (1205)
T ss_pred ccCCCccceecccccCCCCcccccCCccccccccchhhhccchhhccccccccCCccCccccCCCCceecccCCCCCCCC
Confidence 5566778889999999999999988754332 234444322211 11112233334444444567888877777777788
Q ss_pred eEEEEEecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCcccc
Q 003963 578 LCIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKH 657 (783)
Q Consensus 578 ~~lV~E~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~ 657 (783)
.+|+++|+.+++|...|...+ ..+..........++.+++|||... ++|+|++|.|+|+..+++.++.|||......
T Consensus 879 ~~L~~~~~~~~~~~Skl~~~~-~~saepaRs~i~~~vqs~e~L~s~~--r~h~~~~p~~~l~~~~gh~~l~~~~t~~~vg 955 (1205)
T KOG0606|consen 879 LPLVGHYLNGGDLPSKLHNSG-CLSAEPARSPILERVQSLESLHSSL--RKHRDLKPDSLLIAYDGHRPLTDFGTLSKVG 955 (1205)
T ss_pred cchhhHHhccCCchhhhhcCC-CcccccccchhHHHHhhhhccccch--hhcccccccchhhcccCCcccCccccccccc
Confidence 999999999999999997654 3555555556667889999999976 8999999999999999999999998432110
Q ss_pred cc-------------------------------cccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCC
Q 003963 658 ET-------------------------------YLTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPW 706 (783)
Q Consensus 658 ~~-------------------------------~~~~~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~elltG~~Pf 706 (783)
.. ........||+.|.+||...+......+|+|++|+++++.++|.+||
T Consensus 956 ~~~p~~~~sg~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~t~~~laPe~~lg~~hgs~ad~~~~g~~l~e~l~g~pp~ 1035 (1205)
T KOG0606|consen 956 LIPPTTDLSGPSSSGTPRRLSRSERRPQLSADEARRKHAVVGTPDYLAPEILLGRRHGSAADWWSSGVCLFEVLTGIPPF 1035 (1205)
T ss_pred cccCcCCcccccccCccccccccccccccccchhhccccccCCCcccCCcccccccCCCcchhhhhhhhhhhhhcCCCCC
Confidence 00 00122345899999999999999999999999999999999999999
Q ss_pred CCCChHHHHHHhhcccc-cccCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhcC
Q 003963 707 DNLNSMQVIGAVGFMNQ-RLEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQAS 771 (783)
Q Consensus 707 ~~~~~~~~~~~i~~~~~-~~~~~~~~s~~l~~LI~~cL~~dP~~RPsa~ell~~L~~L~~~~f~~~ 771 (783)
......+.++.+..... .+.-+...+++.++++...+..+|.+|..+.-..+ .-.|+||+..
T Consensus 1036 na~tpq~~f~ni~~~~~~~p~g~~~~s~~aq~~~~~ll~~~~~qr~~a~~~~e---~k~~~~~~~~ 1098 (1205)
T KOG0606|consen 1036 NAETPQQIFENILNRDIPWPEGPEEGSYEAQDLINRLLTEEPTQRLGAKGAAE---VKGHPFFQDV 1098 (1205)
T ss_pred CCcchhhhhhccccCCCCCCCCccccChhhhhhhhhhhccCchhccCcccccc---cccCCccCCC
Confidence 99999988887744332 34455678899999999999999999987762211 1456777543
No 445
>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed
Probab=99.32 E-value=2.2e-12 Score=148.11 Aligned_cols=148 Identities=20% Similarity=0.241 Sum_probs=95.9
Q ss_pred cccccceeEeeeeccCCcEEEEEEEEeC-CceEEEEEEecccC---------------------------C-----HHHH
Q 003963 501 EILWEDLTIGEQIGQGSCGTVYHAVWYG-SQDVAVKVFSRQEY---------------------------S-----DEVI 547 (783)
Q Consensus 501 e~~~~~y~i~~~LG~G~fG~Vy~a~~~~-~~~vAiK~i~~~~~---------------------------~-----~~~~ 547 (783)
+..+.+|.. +.||.|++|.||+|..+. ++.||||+.++... . .+..
T Consensus 116 ~~~F~~fd~-~PlasaSiaQVh~A~l~~~G~~VAVKV~rP~i~~~I~~Dl~~l~~~a~~l~~~~~~~~~l~~~~~v~e~~ 194 (537)
T PRK04750 116 EEWFDDFDI-KPLASASIAQVHFARLKDNGREVVVKVLRPDILPVIDADLALMYRLARWVERLLPDGRRLKPREVVAEFE 194 (537)
T ss_pred HHHHHhcCh-hhhcCCCccEEEEEEECCCCCEEEEEEeCcchHHHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHH
Confidence 345667777 899999999999999987 78999999975420 0 0222
Q ss_pred HHHHHHHHHHH------hCC----CCceeeEecee-ecCCceEEEEEecCCCCHHHH--HhhcCC---cchHHHHHHHHH
Q 003963 548 HSFRQEVSLMK------RLR----HPNVLLFMGAV-TSPQRLCIVTEFLPRGSLFRL--LQRNTT---KLDWRRRILMAL 611 (783)
Q Consensus 548 ~~~~~Ei~il~------~l~----HpnIv~l~~~~-~~~~~~~lV~E~~~ggsL~~~--L~~~~~---~l~~~~~~~i~~ 611 (783)
+.+.+|+.+.. +++ +.+.+.+-.++ ..-...+||||||.|+.|.++ +...+. .+....+..++.
T Consensus 195 ~~l~~ElD~~~Ea~N~~~~~~~f~~~~~v~VP~v~~d~st~~VLvmE~i~G~~l~d~~~l~~~g~d~~~la~~~v~~~~~ 274 (537)
T PRK04750 195 KTLHDELDLMREAANASQLRRNFEDSDMLYVPEVYWDYCSETVMVMERMYGIPVSDVAALRAAGTDMKLLAERGVEVFFT 274 (537)
T ss_pred HHHHHhhCHHHHHHHHHHHHHHccCCCCeecceeecccCCCceEEEeeecCccHHhHHHHHhcCCCHHHHHHHHHHHHHH
Confidence 23333433333 331 22222222222 112346799999999999775 333221 233444444444
Q ss_pred HHHHHHHHHHhCCCCEEecCCCCCCEEEcCCC----cEEEEecCCCccccc
Q 003963 612 DIARGVSYLHHCNPPIIHRDLKSSNLLVDKHW----TVKVGDFGLSRLKHE 658 (783)
Q Consensus 612 qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~----~vkL~DFGla~~~~~ 658 (783)
|++ ..| ++|+|+||.||+|+.++ +++++|||++.....
T Consensus 275 Qif-------~~G--ffHaDpHPGNIlv~~~g~~~~~i~llDFGivg~l~~ 316 (537)
T PRK04750 275 QVF-------RDG--FFHADMHPGNIFVSYDPPENPRYIALDFGIVGSLNK 316 (537)
T ss_pred HHH-------hCC--eeeCCCChHHeEEecCCCCCCeEEEEecceEEECCH
Confidence 443 467 99999999999999888 999999999875543
No 446
>TIGR02938 nifL_nitrog nitrogen fixation negative regulator NifL. NifL is a modulator of the nitrogen fixation positive regulator protein NifA, and is therefore a negative regulator. It binds NifA. NifA and NifL are encoded by adjacent genes.
Probab=99.28 E-value=1.5e-11 Score=141.00 Aligned_cols=126 Identities=18% Similarity=0.298 Sum_probs=111.4
Q ss_pred HHHHHHHHHHhCcceEEEcCCCcEEEecHHHHHHcCCChhhHcCCCccccccccccchHHHHHHHHHHhCCeEEEEEEEE
Q 003963 129 DRQYLNILQSMGQSVHIFDLSDRIIYWNRSAELLYGYSAEEALGQDAIELLTDGRDFDVAYDIVHRIKMGERWTGQFPAK 208 (783)
Q Consensus 129 ~~~~~~ile~~~d~I~i~D~~G~Ii~~N~aae~L~Gys~eEllG~~~~~l~~~~~~~~~~~~l~~~l~~g~~~~~e~~~~ 208 (783)
.+.|+.+++.++++|+++|.+|+|+|+|+++++++||++++++|++...+..+.........+.+.+..+..+..++...
T Consensus 3 ~~~~~~i~~~~~~~i~~~d~~g~~~~~N~~~~~~~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (494)
T TIGR02938 3 PEAYRQTVDQAPLAISITDLKANILYANDAFTRITGYTKEEIIGKNESVLSNHTTPPEVYQALWGSLAEQKPWAGKLLNR 82 (494)
T ss_pred hHHHHHHHHhCCceEEEECCCCcEEEEchhheeecCCCHHHHhCCCchhhcCCCCCHHHHHHHHHHHHhCCcccceeecc
Confidence 46799999999999999999999999999999999999999999988777665555445556677777788888888888
Q ss_pred cCCCCEEEEEEEEEEEECCCCCEEEEEEEEEehHHHHHHHHHHHHh
Q 003963 209 TKTEERVLVVATNTPFYDDDGTLVGIVCVSTDSRPFQETRAALWDT 254 (783)
Q Consensus 209 ~kdG~~~~v~~~~~Pi~d~~G~v~g~v~i~rDITerk~~E~~L~~~ 254 (783)
+++|..+|+...+.|+++.+|.+.+++++++|||+++++++++++.
T Consensus 83 ~~~g~~~~~~~~~~~~~~~~g~~~~~~~~~~DIt~~k~~e~~l~~~ 128 (494)
T TIGR02938 83 RKDGELYLAELTVAPVLNEAGETTHFLGMHRDITELHRLEQVVANQ 128 (494)
T ss_pred CCCccchhhheeeEEEECCCCCEEEEEEehhhhhHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999887653
No 447
>KOG1266 consensus Protein kinase [Signal transduction mechanisms]
Probab=99.27 E-value=9.5e-12 Score=129.34 Aligned_cols=199 Identities=24% Similarity=0.409 Sum_probs=141.4
Q ss_pred HHHHhCCCCceeeEeceeecCC-----ceEEEEEecCCCCHHHHHhh---cCCcchHHHHHHHHHHHHHHHHHHHhCCCC
Q 003963 555 SLMKRLRHPNVLLFMGAVTSPQ-----RLCIVTEFLPRGSLFRLLQR---NTTKLDWRRRILMALDIARGVSYLHHCNPP 626 (783)
Q Consensus 555 ~il~~l~HpnIv~l~~~~~~~~-----~~~lV~E~~~ggsL~~~L~~---~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~ 626 (783)
.-|-.+-|.|||+++.||.+.. ...++.||+..|+|..+|++ +...+......+|+-||+.||.|||++.++
T Consensus 119 dnllqlvHsnlvkfH~yw~d~K~~e~~rviFiteymssgs~~~fLkrt~~~~~a~~~~~wkkw~tqIlsal~yLhs~~Pp 198 (458)
T KOG1266|consen 119 DNLLQLVHSNLVKFHKYWTDKKYEEKPRVIFITEYMSSGSLKQFLKRTKKNQKALFQKAWKKWCTQILSALSYLHSCDPP 198 (458)
T ss_pred HHHHHHHHHHHHHHHHhhcccccccccceEEEEecccchhHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhhccCCc
Confidence 3455567999999999986543 47899999999999999975 345577888889999999999999999999
Q ss_pred EEecCCCCCCEEEcCCCcEEEEecCCCcccccc-----cccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHc
Q 003963 627 IIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHET-----YLTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELAT 701 (783)
Q Consensus 627 IvHrDIKp~NILl~~~~~vkL~DFGla~~~~~~-----~~~~~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~ellt 701 (783)
|+|+++..+-|++..+|-||+.--.-.. .+.. ........+-+.|.+||.=.....+.++|||++|...++|..
T Consensus 199 iihgnlTc~tifiq~ngLIkig~~ap~s-~h~s~~~~~~~Ek~~~~~~~g~~a~~sg~~tn~~~a~dIy~fgmcAlemai 277 (458)
T KOG1266|consen 199 IIHGNLTCDTIFIQHNGLIKIGSVAPDS-THPSVNSTREAEKSVNTSLPGFSAPESGTTTNTTGASDIYKFGMCALEMAI 277 (458)
T ss_pred cccCCcchhheeecCCceEEecccCccc-cchhhhhhhHhhhhccccCCccccCCcCcccccccchhhhhhhHHHHHHHH
Confidence 9999999999999999888874322111 1110 011112245678999998766777889999999999999988
Q ss_pred CCCCCC-CCChHHHHHHhhcccccccCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHH
Q 003963 702 EKIPWD-NLNSMQVIGAVGFMNQRLEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDK 759 (783)
Q Consensus 702 G~~Pf~-~~~~~~~~~~i~~~~~~~~~~~~~s~~l~~LI~~cL~~dP~~RPsa~ell~~ 759 (783)
+..--. ..........+.... +.+ -...-+.+|.+|++..|..||++++++.+
T Consensus 278 lEiq~tnseS~~~~ee~ia~~i--~~l---en~lqr~~i~kcl~~eP~~rp~ar~llfH 331 (458)
T KOG1266|consen 278 LEIQSTNSESKVEVEENIANVI--IGL---ENGLQRGSITKCLEGEPNGRPDARLLLFH 331 (458)
T ss_pred heeccCCCcceeehhhhhhhhe--eec---cCccccCcCcccccCCCCCCcchhhhhcC
Confidence 754321 111111111221111 111 11223568999999999999999998643
No 448
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.26 E-value=3.6e-12 Score=143.06 Aligned_cols=248 Identities=19% Similarity=0.144 Sum_probs=180.1
Q ss_pred cccceeEeeeeccCCcEEEEEEEEe--CCceEEEEEEecccCCHHHHHHHHHHHHHHHhCC-CCceeeEeceeecCCceE
Q 003963 503 LWEDLTIGEQIGQGSCGTVYHAVWY--GSQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLR-HPNVLLFMGAVTSPQRLC 579 (783)
Q Consensus 503 ~~~~y~i~~~LG~G~fG~Vy~a~~~--~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~-HpnIv~l~~~~~~~~~~~ 579 (783)
...+|..+..||.|.|+.||++... ++..|++|-+.+..........-..|+.+...+. |.+++.++..|......|
T Consensus 263 ~~~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~W~~~r~~~ 342 (524)
T KOG0601|consen 263 KLTDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNGLATFASDIFSLGEVILEAILGSHLPSVGKNSSWSQLRQGY 342 (524)
T ss_pred ecCCcceeEEccCCccccceeeeecCCCCceEeChhhhccccchHhhhcchhhhhHhhHhhcccccCCCCCCcccccccc
Confidence 3568889999999999999998743 3456888877665443322223345677766664 899999999998888889
Q ss_pred EEEEecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCC-CcEEEEecCCCccccc
Q 003963 580 IVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKH-WTVKVGDFGLSRLKHE 658 (783)
Q Consensus 580 lV~E~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~-~~vkL~DFGla~~~~~ 658 (783)
+-.|||.++++...+ .....+.+...+.+..|++.++.++|+.. ++|+|+||.||++..+ +.-++.|||+.....-
T Consensus 343 ip~e~~~~~s~~l~~-~~~~~~d~~~~~~~~~q~~~~l~~i~s~~--~~~~d~~psni~i~~~~~~~~~~~~~~~t~~~~ 419 (524)
T KOG0601|consen 343 IPLEFCEGGSSSLRS-VTSQMLDEDPRLRLTAQILTALNVIHSKL--FVHLDVKPSNILISNDGFFSKLGDFGCWTRLAF 419 (524)
T ss_pred CchhhhcCcchhhhh-HHHHhcCcchhhhhHHHHHhccccccchh--hhcccccccceeeccchhhhhccccccccccce
Confidence 999999998887665 22344777888999999999999999988 9999999999999876 7889999998864211
Q ss_pred ccccccCCCCCCcc-cCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhcccccccCCCCCCHHHHH
Q 003963 659 TYLTTKTGKGTPQW-MAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAA 737 (783)
Q Consensus 659 ~~~~~~~~~Gt~~Y-~aPE~~~~~~~s~~sDIwSLG~il~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~l~~ 737 (783)
. .......+..| .++.......+..+.|+|+||..+.+.+++.+--....... .+ .............++..
T Consensus 420 ~--~~~~~~~~r~~p~~~~~~e~~~~~~~~~~~sl~~~~~e~~~~~~ls~~~~~~~---~i--~~~~~p~~~~~~~~~q~ 492 (524)
T KOG0601|consen 420 S--SGVFHHIDRLYPIAEILLEDYPHLSKADIFSLGLSVDEAITGSPLSESGVQSL---TI--RSGDTPNLPGLKLQLQV 492 (524)
T ss_pred e--cccccccccccccchhhccccccccccccccccccccccccCcccCcccccce---ee--ecccccCCCchHHhhhh
Confidence 1 11111223344 35556666778899999999999999999865333222111 11 12223333344488899
Q ss_pred HHHHhhhhCCCCCCCHHHHHHHH
Q 003963 738 IVESCWHSDPQCRPSFQELVDKL 760 (783)
Q Consensus 738 LI~~cL~~dP~~RPsa~ell~~L 760 (783)
+.+.++.+++..||.+.++..+.
T Consensus 493 ~~kv~~~~~~~~~~l~~~l~~~~ 515 (524)
T KOG0601|consen 493 LLKVMINPDRKRRPSAVELSLHS 515 (524)
T ss_pred hhhhhcCCccccchhhhhhcccc
Confidence 99999999999999988885443
No 449
>TIGR00229 sensory_box PAS domain S-box. The PAS domain was previously described. This sensory box, or S-box domain occupies the central portion of the PAS domain but is more widely distributed. It is often tandemly repeated. Known prosthetic groups bound in the S-box domain include heme in the oxygen sensor FixL, FAD in the redox potential sensor NifL, and a 4-hydroxycinnamyl chromophore in photoactive yellow protein. Proteins containing the domain often contain other regulatory domains such as response regulator or sensor histidine kinase domains. Other S-box proteins include phytochromes and the aryl hydrocarbon receptor nuclear translocator.
Probab=99.26 E-value=8.1e-11 Score=102.65 Aligned_cols=120 Identities=23% Similarity=0.400 Sum_probs=97.7
Q ss_pred HHHHHHHHHhCcceEEEcCCCcEEEecHHHHHHcCCChhhHcCCCccccccccccchHHHHHHHHHHhCCe-EEEEEEEE
Q 003963 130 RQYLNILQSMGQSVHIFDLSDRIIYWNRSAELLYGYSAEEALGQDAIELLTDGRDFDVAYDIVHRIKMGER-WTGQFPAK 208 (783)
Q Consensus 130 ~~~~~ile~~~d~I~i~D~~G~Ii~~N~aae~L~Gys~eEllG~~~~~l~~~~~~~~~~~~l~~~l~~g~~-~~~e~~~~ 208 (783)
+.++.+++.++++++++|.+|.|+++|+++++++|++..+++|+.+..++++.........+...+..+.. ......+.
T Consensus 3 ~~~~~~~~~~~~~~~~~d~~~~i~~~n~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (124)
T TIGR00229 3 ERYRAIFESSPDAIIVIDLEGNILYVNPAFEEIFGYSAEELIGRNVLELIPEEDREEVRERIERLLEGEREPVSEERRVR 82 (124)
T ss_pred hHHHHHHhhCCceEEEEcCCCcEEEEchHHHHHhCCChHHhcCcchhhhcChhhhHHHHHHHHHHHcCCCCCcceEeeeE
Confidence 56889999999999999999999999999999999999999999998877665543333344455553322 33445555
Q ss_pred cCCCCEEEEEEEEEEEECCCCCEEEEEEEEEehHHHHHHHHH
Q 003963 209 TKTEERVLVVATNTPFYDDDGTLVGIVCVSTDSRPFQETRAA 250 (783)
Q Consensus 209 ~kdG~~~~v~~~~~Pi~d~~G~v~g~v~i~rDITerk~~E~~ 250 (783)
..+|..+|+.....|+. .+|...+++++++|||++++++++
T Consensus 83 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~dit~~~~~~~~ 123 (124)
T TIGR00229 83 RKDGSEIWVEVSVSPIR-TNGGELGVVGIVRDITERKQAEEA 123 (124)
T ss_pred cCCCCEEEEEEEEeehh-hCCCeeEEEEEeeehhHHHHHHhc
Confidence 88999999999999998 788899999999999999988764
No 450
>cd05151 ChoK Choline Kinase (ChoK). The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph
Probab=99.24 E-value=2.4e-11 Score=119.32 Aligned_cols=130 Identities=15% Similarity=0.102 Sum_probs=94.7
Q ss_pred eeeeccCCcEEEEEEEEeCCceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCce-eeEeceeecCCceEEEEEecCCC
Q 003963 510 GEQIGQGSCGTVYHAVWYGSQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNV-LLFMGAVTSPQRLCIVTEFLPRG 588 (783)
Q Consensus 510 ~~~LG~G~fG~Vy~a~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnI-v~l~~~~~~~~~~~lV~E~~~gg 588 (783)
++.|+.|.++.||++... ++.|++|+....... ...+..|+.+++.+.+.++ ++++.+.. ...++||||++|.
T Consensus 3 ~~~l~~G~~~~vy~~~~~-~~~~~lK~~~~~~~~---~~~~~~E~~~l~~l~~~~~~P~~~~~~~--~~~~lv~e~i~G~ 76 (170)
T cd05151 3 ISPLKGGMTNKNYRVEVA-NKKYVVRIPGNGTEL---LINRENEAENSKLAAEAGIGPKLYYFDP--ETGVLITEFIEGS 76 (170)
T ss_pred eeecCCcccCceEEEEEC-CeEEEEEeCCCCccc---ccCHHHHHHHHHHHHHhCCCCceEEEeC--CCCeEEEEecCCC
Confidence 467899999999999865 568999987554311 1245678899998865444 45554433 3458999999998
Q ss_pred CHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCC---CEEecCCCCCCEEEcCCCcEEEEecCCCcc
Q 003963 589 SLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNP---PIIHRDLKSSNLLVDKHWTVKVGDFGLSRL 655 (783)
Q Consensus 589 sL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~---~IvHrDIKp~NILl~~~~~vkL~DFGla~~ 655 (783)
++.... . ....++.+++.+|+.||..+. .++|+|++|.||+++ ++.++|+|||.+..
T Consensus 77 ~l~~~~------~---~~~~~~~~l~~~l~~LH~~~~~~~~~~HgD~~~~Nil~~-~~~~~liDf~~a~~ 136 (170)
T cd05151 77 ELLTED------F---SDPENLEKIAKLLKKLHSSPLPDLVPCHNDLLPGNFLLD-DGRLWLIDWEYAGM 136 (170)
T ss_pred cccccc------c---cCHHHHHHHHHHHHHHhCCCCCCceeecCCCCcCcEEEE-CCeEEEEecccccC
Confidence 775430 0 112345689999999998761 249999999999999 66899999998753
No 451
>COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only]
Probab=99.24 E-value=2.4e-10 Score=122.56 Aligned_cols=260 Identities=14% Similarity=0.212 Sum_probs=177.1
Q ss_pred eeEeeeeccCCcEEEEEEEEeCCceEEEEEEecccCCHHHHHHHHHHHHHHHhC-CCCceeeEece------eecCC-ce
Q 003963 507 LTIGEQIGQGSCGTVYHAVWYGSQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRL-RHPNVLLFMGA------VTSPQ-RL 578 (783)
Q Consensus 507 y~i~~~LG~G~fG~Vy~a~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l-~HpnIv~l~~~------~~~~~-~~ 578 (783)
...++.||+|+-+.+|-.-.. +..+.|+.......... +-+..|... .||-+-.-+.| .-+.. ..
T Consensus 13 i~~gr~LgqGgea~ly~l~e~--~d~VAKIYh~Pppa~~a-----qk~a~la~~p~~p~~~~rvaWPqa~L~G~~~~~~i 85 (637)
T COG4248 13 IPPGRPLGQGGEADLYTLGEV--RDQVAKIYHAPPPAAQA-----QKVAELAATPDAPLLNYRVAWPQATLHGGRRGKVI 85 (637)
T ss_pred cCCCccccCCccceeeecchh--hchhheeecCCCchHHH-----HHHHHhccCCCCcchhhhhcccHHHhhCCCcccee
Confidence 456788999999999975322 24566877655432211 122333333 46543321111 11222 26
Q ss_pred EEEEEecCCCCH-HHHHh-----hcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCC
Q 003963 579 CIVTEFLPRGSL-FRLLQ-----RNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGL 652 (783)
Q Consensus 579 ~lV~E~~~ggsL-~~~L~-----~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGl 652 (783)
.++|..+.|..- ..++. +......|+..+..++.|+.+.+.||..| .+-+|+.++|+||++++.|.|+|-..
T Consensus 86 GflmP~v~g~~pI~~~y~p~tRRqs~P~~~w~fllrvaRnlA~aFA~lH~~G--h~vGDVn~~~~lVsd~~~V~LVdsDs 163 (637)
T COG4248 86 GFLMPKVSGKEPIHMIYSPATRRQSYPHCAWDFLLRVARNLASAFATLHEHG--HVVGDVNQNSFLVSDDSKVVLVDSDS 163 (637)
T ss_pred EEecccCCCccchhhhcCchhhcccCCccccHHHHHHHHHHHHHHHHHHhcC--CcccccCccceeeecCceEEEEcccc
Confidence 788999877632 33331 12233789999999999999999999999 88999999999999999999999765
Q ss_pred CcccccccccccCCCCCCcccCccccc-----CCCCCchhHHHHHHHHHHHHHcC-CCCCCCCChH----HHHH-Hhhc-
Q 003963 653 SRLKHETYLTTKTGKGTPQWMAPEVLR-----NEPSDEKSDVYSFGVILWELATE-KIPWDNLNSM----QVIG-AVGF- 720 (783)
Q Consensus 653 a~~~~~~~~~~~~~~Gt~~Y~aPE~~~-----~~~~s~~sDIwSLG~il~elltG-~~Pf~~~~~~----~~~~-~i~~- 720 (783)
.... .........+|.+.|++||... +..-+...|.|.||+++++++.| +.||.+.... .-++ .|..
T Consensus 164 fqi~-~ng~~~~cpVg~~eftPPElQ~~~sf~g~~r~~~hD~FGLavLiF~lL~ggrHPysGI~~~~~ap~p~E~~Ia~g 242 (637)
T COG4248 164 FQIN-ANGTLHLCPVGVSEFTPPELQTLPSFVGFERTANHDNFGLAVLIFHLLFGGRHPYSGIPLISDAPNPLETDIAHG 242 (637)
T ss_pred eeec-cCCceEecccCccccCCHHHhccccccccCCCccccchhHHHHHHHHHhcCCCCCCcccccCCCCCcchhhhhcc
Confidence 4333 2223344668999999999865 34446778999999999999986 9999754321 0111 1110
Q ss_pred --------ccccccCC-----CCCCHHHHHHHHHhhhhC--CCCCCCHHHHHHHHHHHHHHHhhcCcCCCC
Q 003963 721 --------MNQRLEIP-----KDVDPRWAAIVESCWHSD--PQCRPSFQELVDKLRDLQRQYFQASRSTVG 776 (783)
Q Consensus 721 --------~~~~~~~~-----~~~s~~l~~LI~~cL~~d--P~~RPsa~ell~~L~~L~~~~f~~~~~~~~ 776 (783)
.....+.| .-+++.+..|+.+|+..- +.-||+++.++..|..+.+++-+|+++.+-
T Consensus 243 ~f~ya~~~~~g~~p~P~~~P~~~Lpp~vqAlF~qaF~~~~~~~~RP~a~aW~aAl~al~~~L~~C~v~a~H 313 (637)
T COG4248 243 RFAYASDQRRGLKPPPRSIPLSMLPPDVQALFQQAFTESGVATPRPTAKAWVAALDALRQQLKKCTVSAMH 313 (637)
T ss_pred eeeechhccCCCCCCCCCCChhhcCHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHHHHhhhhhhhcccc
Confidence 11111222 236789999999999643 568999999999999999999999998764
No 452
>PRK13560 hypothetical protein; Provisional
Probab=99.24 E-value=7.6e-11 Score=144.18 Aligned_cols=129 Identities=15% Similarity=0.124 Sum_probs=106.8
Q ss_pred CCHHHHHHHHHHhCcceEEEcCCCcEEEecHHHHHHcCCChhhHcCCCccccccccccchHHHHHHHHHHhCCeEEEEEE
Q 003963 127 FTDRQYLNILQSMGQSVHIFDLSDRIIYWNRSAELLYGYSAEEALGQDAIELLTDGRDFDVAYDIVHRIKMGERWTGQFP 206 (783)
Q Consensus 127 ~~~~~~~~ile~~~d~I~i~D~~G~Ii~~N~aae~L~Gys~eEllG~~~~~l~~~~~~~~~~~~l~~~l~~g~~~~~e~~ 206 (783)
..++.|+.++++++++|+++|.+|+|+++|+++++++||+.+|++|+++.+++++.............+..+.....+..
T Consensus 201 ~~~~~l~~l~e~~~~~i~~~d~~g~i~~~N~~~~~~~G~~~~e~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~ 280 (807)
T PRK13560 201 EALHFLQQLLDNIADPAFWKDEDAKVFGCNDAACLACGFRREEIIGMSIHDFAPAQPADDYQEADAAKFDADGSQIIEAE 280 (807)
T ss_pred HHHHHHHHHHhhCCCeEEEEcCCCCEEEEhHHHHHHhCCCHHHHcCCcchhcCCcchhHHHHHHHHHHhccCCceEEEEE
Confidence 34566889999999999999999999999999999999999999999999988665433322233455566666777888
Q ss_pred EEcCCCCEEEEEE--EEEEEECCCCCEEEEEEEEEehHHHHHHHHHHHHhh
Q 003963 207 AKTKTEERVLVVA--TNTPFYDDDGTLVGIVCVSTDSRPFQETRAALWDTK 255 (783)
Q Consensus 207 ~~~kdG~~~~v~~--~~~Pi~d~~G~v~g~v~i~rDITerk~~E~~L~~~~ 255 (783)
.+++||..+|+.+ +..|+.+.+|.+.|++++++|||++|++|++|+...
T Consensus 281 ~~~~dG~~~~~~~~~~~~~~~~~~g~~~g~~~~~~DITerk~~e~~L~~se 331 (807)
T PRK13560 281 FQNKDGRTRPVDVIFNHAEFDDKENHCAGLVGAITDISGRRAAERELLEKE 331 (807)
T ss_pred EEcCCCCEEEEEEEecceEEEcCCCCEEEEEEEEEechHHHHHHHHHHHHH
Confidence 8999999996655 456678999999999999999999999999987543
No 453
>PRK10060 RNase II stability modulator; Provisional
Probab=99.21 E-value=2.3e-10 Score=137.09 Aligned_cols=130 Identities=18% Similarity=0.245 Sum_probs=105.1
Q ss_pred HHHHHHHHHhCcceEEEcCCCcEEEecHHHHHHcCCChhhHcCCCcccccccccc-chHHHHHHHHHHhCCeEEEEEEEE
Q 003963 130 RQYLNILQSMGQSVHIFDLSDRIIYWNRSAELLYGYSAEEALGQDAIELLTDGRD-FDVAYDIVHRIKMGERWTGQFPAK 208 (783)
Q Consensus 130 ~~~~~ile~~~d~I~i~D~~G~Ii~~N~aae~L~Gys~eEllG~~~~~l~~~~~~-~~~~~~l~~~l~~g~~~~~e~~~~ 208 (783)
.+++.+++.++++|+++|.+|+|+++|+++++++||+.++++|+++.+++.+... ......+...+..+..+..+.++.
T Consensus 111 ~~~~~v~~~~~~gI~i~D~~g~I~~~N~a~~~l~Gy~~~eliG~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~ 190 (663)
T PRK10060 111 SFAEQVVSEANSVIVILDSRGNIQRFNRLCEEYTGLKEHDVIGQSVFKLFMSRREAAASRRNIRGFFRSGNAYEVERWIK 190 (663)
T ss_pred HHHHHHHhhCCceEEEEeCCCCEEEEcHHHHHHHCcCHHHHcCCCHHHHhCChhhHHHHHHHHHHHHhcCCceEEEEEEE
Confidence 5678899999999999999999999999999999999999999999887654432 233345566788888899999999
Q ss_pred cCCCCEEEEEEEEEEEECCCCC-EEEEEEEEEehHHHHHHHHHHHHhhccccc
Q 003963 209 TKTEERVLVVATNTPFYDDDGT-LVGIVCVSTDSRPFQETRAALWDTKNSDTD 260 (783)
Q Consensus 209 ~kdG~~~~v~~~~~Pi~d~~G~-v~g~v~i~rDITerk~~E~~L~~~~~~~~~ 260 (783)
+++|..+|+..... +.+.+|. ..+++++.+|||+++++++++++.......
T Consensus 191 ~~~G~~~~~~~~~~-~~~~~g~~~~~~i~~~~DITe~k~~e~~l~~~a~~D~L 242 (663)
T PRK10060 191 TRKGQRLFLFRNKF-VHSGSGKNEIFLICSGTDITEERRAQERLRILANTDSI 242 (663)
T ss_pred eCCCCEEEEEeeeE-EEcCCCCceEEEEEEEEechHHHHHHHHHHHHhhcCcc
Confidence 99999998876654 4444553 466888999999999999999876554443
No 454
>PRK13558 bacterio-opsin activator; Provisional
Probab=99.20 E-value=2.1e-10 Score=137.84 Aligned_cols=127 Identities=22% Similarity=0.256 Sum_probs=112.4
Q ss_pred HHHHHHHHHhCcceEEEc---CCCcEEEecHHHHHHcCCChhhHcCCCccccccccccchHHHHHHHHHHhCCeEEEEEE
Q 003963 130 RQYLNILQSMGQSVHIFD---LSDRIIYWNRSAELLYGYSAEEALGQDAIELLTDGRDFDVAYDIVHRIKMGERWTGQFP 206 (783)
Q Consensus 130 ~~~~~ile~~~d~I~i~D---~~G~Ii~~N~aae~L~Gys~eEllG~~~~~l~~~~~~~~~~~~l~~~l~~g~~~~~e~~ 206 (783)
+.++.+++..+++|+++| .+|.|+|+|+++++++||+.++++|+++..++++.........+...+..+..+..++.
T Consensus 148 r~~~~~~~~~~~gi~~~d~~~~dg~i~~~N~~~~~l~G~~~eel~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~e~~ 227 (665)
T PRK13558 148 RLKERALDEAPVGITIADATLPDEPLIYINDAFERITGYSPDEVLGRNCRFLQGEDTNEERVAELREAIDEERPTSVELR 227 (665)
T ss_pred HHHHHHHhcCCccEEEEcCCCCCCcEEEEcHHHHHHhCcCHHHHcCCCHHHhcCCCccHHHHHHHHHHHhcCCCeEEEEE
Confidence 456789999999999997 47999999999999999999999999998888776655555567777888888888999
Q ss_pred EEcCCCCEEEEEEEEEEEECCCCCEEEEEEEEEehHHHHHHHHHHHHhhc
Q 003963 207 AKTKTEERVLVVATNTPFYDDDGTLVGIVCVSTDSRPFQETRAALWDTKN 256 (783)
Q Consensus 207 ~~~kdG~~~~v~~~~~Pi~d~~G~v~g~v~i~rDITerk~~E~~L~~~~~ 256 (783)
.+++||..+|+.++..|+.+.+|.+.+++++++|||++|++|+++++...
T Consensus 228 ~~~~dG~~~~~~~~~~pi~d~~G~~~~~vgi~~DITerk~~E~~L~~~~~ 277 (665)
T PRK13558 228 NYRKDGSTFWNQVDIAPIRDEDGTVTHYVGFQTDVTERKEAELALQRERR 277 (665)
T ss_pred EECCCCCEEEEEEEEEEEECCCCCEEEEEEEEEeCcHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999876443
No 455
>PRK11073 glnL nitrogen regulation protein NR(II); Provisional
Probab=99.19 E-value=1e-10 Score=128.75 Aligned_cols=144 Identities=15% Similarity=0.070 Sum_probs=112.7
Q ss_pred HHHHHHHHHHhCcceEEEcCCCcEEEecHHHHHHcCCChhhHcCCCccccccccccchHHHHHHHHHHhCCeEEEEEEEE
Q 003963 129 DRQYLNILQSMGQSVHIFDLSDRIIYWNRSAELLYGYSAEEALGQDAIELLTDGRDFDVAYDIVHRIKMGERWTGQFPAK 208 (783)
Q Consensus 129 ~~~~~~ile~~~d~I~i~D~~G~Ii~~N~aae~L~Gys~eEllG~~~~~l~~~~~~~~~~~~l~~~l~~g~~~~~e~~~~ 208 (783)
...++.+++++++||+++|.+|+|+++|++|++++||+.++++|+++.++++.... ....+...+..+..+......+
T Consensus 6 ~~~~~~il~~~~~gi~~~d~~~~i~~~N~a~~~~~g~~~~~~~g~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 83 (348)
T PRK11073 6 LPDAGQILNSLINSILLLDDDLAIHYANPAAQQLLAQSSRKLFGTPLPELLSYFSL--NIELMRESLQAGQGFTDNEVTL 83 (348)
T ss_pred cchHHHHHhcCcCeEEEECCCCeEeeEcHHHHHHhCCCHHHHcCCCHHHHcCcchh--hHHHHHHHHHcCCcccccceEE
Confidence 35689999999999999999999999999999999999999999999998764321 1223455666666555444555
Q ss_pred cCCCCEEEEEEEEEEEECCCCCEEEEEEEEEehHHHHHHHHHHHHhhccccccccCCchhHHHHhhcCCchhHHHHHH
Q 003963 209 TKTEERVLVVATNTPFYDDDGTLVGIVCVSTDSRPFQETRAALWDTKNSDTDSNINRPRNTVTAKLGLDSQQPLQATI 286 (783)
Q Consensus 209 ~kdG~~~~v~~~~~Pi~d~~G~v~g~v~i~rDITerk~~E~~L~~~~~~~~~~~~~~~~~~l~~~l~~d~~qpl~~~i 286 (783)
.+||..+|+.++..|+. . .+++..++|||+++++++++....... ....+...++||+++||+...
T Consensus 84 ~~~g~~~~~~~~~~~~~--~---~~~~~~~~dit~~~~~~~~~~~~~~~~-------~~~~~~~~iaHelr~pL~~i~ 149 (348)
T PRK11073 84 VIDGRSHILSLTAQRLP--E---GMILLEMAPMDNQRRLSQEQLQHAQQV-------AARDLVRGLAHEIKNPLGGLR 149 (348)
T ss_pred EECCceEEEEEEEEEcc--C---ceeEEEEechhHHHHHHHHHHHHHHHH-------HHHHHHHhhhHhhcChHHHHH
Confidence 67999999999999987 2 346778999999999888775543321 223488899999999998754
No 456
>TIGR02040 PpsR-CrtJ transcriptional regulator PpsR. This model represents the transcriptional regulator PpsR which is strictly associated with photosynthetic proteobacteria and found in photosynthetic operons. PpsR has been reported to be a repressor. These proteins contain a Helix-Turn_Helix motif of the "fis" type (pfam02954).
Probab=99.18 E-value=2.8e-10 Score=129.95 Aligned_cols=114 Identities=15% Similarity=0.030 Sum_probs=90.7
Q ss_pred HHHHHHHHhCcceEEEcCCCcEEEecHHHHHHcCCC-hhhHcCCCccccccccccchHHHHHHHHHH-hCCeEEEEEEEE
Q 003963 131 QYLNILQSMGQSVHIFDLSDRIIYWNRSAELLYGYS-AEEALGQDAIELLTDGRDFDVAYDIVHRIK-MGERWTGQFPAK 208 (783)
Q Consensus 131 ~~~~ile~~~d~I~i~D~~G~Ii~~N~aae~L~Gys-~eEllG~~~~~l~~~~~~~~~~~~l~~~l~-~g~~~~~e~~~~ 208 (783)
.|+.++++++++|+++|.+|+|+++|++|++++||+ .++++|+++..++.+... . ...+...++ .|.....+....
T Consensus 253 ~~~~l~e~~~d~I~v~D~~G~I~~~N~a~~~l~G~~~~~~l~G~~~~~~~~~~~~-~-~~~~~~~~~~~g~~~~~~~~~~ 330 (442)
T TIGR02040 253 NLARLYHEAPDAIVFSDADGTIRGANEAFLELTDSSSLEAVRGRTLDRWLGRGGV-D-LRVLLSNVRRTGQVRLYATTLT 330 (442)
T ss_pred HHHHHHHhCCceEEEEcCCCcEEehhHHHHHHhCCCChHHHcCCCHHHHhCCCcc-c-HHHHHHHHhhcCceEEEEEEEE
Confidence 589999999999999999999999999999999997 578999999887764322 1 223333343 344444566678
Q ss_pred cCCCCEEEEEEEEEEEECCCCCEEEEEEEEEehHHHHHHH
Q 003963 209 TKTEERVLVVATNTPFYDDDGTLVGIVCVSTDSRPFQETR 248 (783)
Q Consensus 209 ~kdG~~~~v~~~~~Pi~d~~G~v~g~v~i~rDITerk~~E 248 (783)
++||..+|+.+++.|+.+.++ ..++++++|||+|++.+
T Consensus 331 ~~~G~~~~ve~s~~~i~~~~~--~~~~~v~rDITeR~~~~ 368 (442)
T TIGR02040 331 GEFGAQTEVEISAAWVDQGER--PLIVLVIRDISRRLTMR 368 (442)
T ss_pred cCCCCEEEEEEEEEEeccCCc--eEEEEEEecchhhccCC
Confidence 999999999999999986555 45788999999998774
No 457
>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.
Probab=99.17 E-value=1.9e-10 Score=115.66 Aligned_cols=139 Identities=20% Similarity=0.180 Sum_probs=98.6
Q ss_pred eeeeccCCcEEEEEEEEeC-------CceEEEEEEecccC--------------------CHHHHHH----HHHHHHHHH
Q 003963 510 GEQIGQGSCGTVYHAVWYG-------SQDVAVKVFSRQEY--------------------SDEVIHS----FRQEVSLMK 558 (783)
Q Consensus 510 ~~~LG~G~fG~Vy~a~~~~-------~~~vAiK~i~~~~~--------------------~~~~~~~----~~~Ei~il~ 558 (783)
...||.|--+.||.|.... +..+|||+.+.... .....+. ..+|+..|+
T Consensus 2 ~g~i~~GKEa~V~~~~~~~~~~~~~~~~~~avKi~r~~~~~Fk~~~~y~~~~~rf~~~~~k~~~~~~~~~wa~kE~r~L~ 81 (197)
T cd05146 2 NGCISTGKESVVLHANGGSNETEQVIPTECAIKVFKTTLNEFKNRDKYIKDDYRFKDRFSKLNPRKIIRMWAEKEMHNLK 81 (197)
T ss_pred CCccccCcceEEEEEecCcccccccCCceEEEEEEeccceeEcChhhhccCCcccccCcCCCCHHHHHHHHHHHHHHHHH
Confidence 3578999999999998653 36899999743210 0111222 348999999
Q ss_pred hCCC--CceeeEeceeecCCceEEEEEecCCCCHHH-HHhhcCCcchHHHHHHHHHHHHHHHHHH-HhCCCCEEecCCCC
Q 003963 559 RLRH--PNVLLFMGAVTSPQRLCIVTEFLPRGSLFR-LLQRNTTKLDWRRRILMALDIARGVSYL-HHCNPPIIHRDLKS 634 (783)
Q Consensus 559 ~l~H--pnIv~l~~~~~~~~~~~lV~E~~~ggsL~~-~L~~~~~~l~~~~~~~i~~qi~~aL~~L-H~~~~~IvHrDIKp 634 (783)
++.. -++++++++ ...+|||||+.+..+.. .+.. ..++......+..+++.+|..| |+.| |||+||++
T Consensus 82 rl~~~Gv~vP~pi~~----~~~~lvME~Ig~~~~~~~~Lkd--~~~~~~~~~~i~~~i~~~l~~l~H~~g--lVHGDLs~ 153 (197)
T cd05146 82 RMQKAGIPCPEVVVL----KKHVLVMSFIGDDQVPAPKLKD--AKLNDEEMKNAYYQVLSMMKQLYKECN--LVHADLSE 153 (197)
T ss_pred HHHHcCCCCCeEEEe----cCCEEEEEEcCCCCccchhhhc--cccCHHHHHHHHHHHHHHHHHHHHhCC--eecCCCCH
Confidence 9853 456666654 45789999997654422 2222 1244455667778999999998 8888 99999999
Q ss_pred CCEEEcCCCcEEEEecCCCcccc
Q 003963 635 SNLLVDKHWTVKVGDFGLSRLKH 657 (783)
Q Consensus 635 ~NILl~~~~~vkL~DFGla~~~~ 657 (783)
.|||+++ +.++|+|||.+....
T Consensus 154 ~NIL~~~-~~v~iIDF~qav~~~ 175 (197)
T cd05146 154 YNMLWHD-GKVWFIDVSQSVEPT 175 (197)
T ss_pred HHEEEEC-CcEEEEECCCceeCC
Confidence 9999974 689999999876443
No 458
>PRK09776 putative diguanylate cyclase; Provisional
Probab=99.13 E-value=2.4e-10 Score=144.80 Aligned_cols=130 Identities=13% Similarity=0.087 Sum_probs=110.2
Q ss_pred CCHHHHHHHHHHhCcceEEEcCCCcEEEecHHHHHHcCCChhhHcCCCccccccccccchHHHHHHHHHHhC-CeEEEEE
Q 003963 127 FTDRQYLNILQSMGQSVHIFDLSDRIIYWNRSAELLYGYSAEEALGQDAIELLTDGRDFDVAYDIVHRIKMG-ERWTGQF 205 (783)
Q Consensus 127 ~~~~~~~~ile~~~d~I~i~D~~G~Ii~~N~aae~L~Gys~eEllG~~~~~l~~~~~~~~~~~~l~~~l~~g-~~~~~e~ 205 (783)
..++.++.+++.++++|+++|.+|+|+++|+++++++||+.+|++|++..+++++++.......+...+..+ ..+..+.
T Consensus 280 ~~e~r~~~l~e~~~~~i~~~d~dG~i~~~N~~~~~l~G~~~~el~g~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~e~ 359 (1092)
T PRK09776 280 ESETRFRNAMEYSAIGMALVGTEGQWLQVNKALCQFLGYSQEELRGLTFQQLTWPEDLNKDLQQVEKLLSGEINSYSMEK 359 (1092)
T ss_pred HHHHHHHHHHHhCCceEEEEcCCCcEEehhHHHHHHhCCCHHHHccCCceeccCcchhHhHHHHHHHHHcCCccceeeee
Confidence 345678999999999999999999999999999999999999999999999888776544433333333332 2367788
Q ss_pred EEEcCCCCEEEEEEEEEEEECCCCCEEEEEEEEEehHHHHHHHHHHHHhhc
Q 003963 206 PAKTKTEERVLVVATNTPFYDDDGTLVGIVCVSTDSRPFQETRAALWDTKN 256 (783)
Q Consensus 206 ~~~~kdG~~~~v~~~~~Pi~d~~G~v~g~v~i~rDITerk~~E~~L~~~~~ 256 (783)
+..++||+.+|+..+..|+++.+|++.+++++++|||++|++|+++++..+
T Consensus 360 ~~~~~dG~~~~~~~~~~~~~~~~g~~~~~i~~~~DITerk~~e~~l~~~~~ 410 (1092)
T PRK09776 360 RYYRRDGEVVWALLAVSLVRDTDGTPLYFIAQIEDINELKRTEQVNERLME 410 (1092)
T ss_pred EEEcCCCCEEEEEEEEEEEECCCCCEeeehhhHHhhHHHHHHHHHHHHHHH
Confidence 889999999999999999999999999999999999999999999876543
No 459
>TIGR02966 phoR_proteo phosphate regulon sensor kinase PhoR. Members of this protein family are the regulatory histidine kinase PhoR associated with the phosphate ABC transporter in most Proteobacteria. Related proteins from Gram-positive organisms are not included in this model. The phoR gene usually is adjacent to the response regulator phoB gene (TIGR02154).
Probab=99.12 E-value=4.3e-10 Score=121.96 Aligned_cols=128 Identities=16% Similarity=0.251 Sum_probs=102.0
Q ss_pred HHHHHHHHHHhCcceEEEcCCCcEEEecHHHHHHcCCChhhHcCCCccccccccccchHHHHHHHHHHhCCeEEEEEEEE
Q 003963 129 DRQYLNILQSMGQSVHIFDLSDRIIYWNRSAELLYGYSAEEALGQDAIELLTDGRDFDVAYDIVHRIKMGERWTGQFPAK 208 (783)
Q Consensus 129 ~~~~~~ile~~~d~I~i~D~~G~Ii~~N~aae~L~Gys~eEllG~~~~~l~~~~~~~~~~~~l~~~l~~g~~~~~e~~~~ 208 (783)
.+.++.+++.++++|+++|.+|+|++||++|++++||++++++|+++.+++.+.. +...+..+.. ...+...
T Consensus 5 ~~~l~~~~~~~~~~i~~~d~~g~i~~~N~~~~~~~g~~~~~~~g~~~~~~~~~~~-------~~~~l~~~~~-~~~~~~~ 76 (333)
T TIGR02966 5 LSRFRAAAQALPDAVVVLDEEGQIEWCNPAAERLLGLRWPDDLGQRITNLIRHPE-------FVEYLAAGRF-SEPLELP 76 (333)
T ss_pred HHHHHHHHHhCcCcEEEECCCCcEEEEcHHHHHHhCCChHHHcCCcHHHHccCHH-------HHHHHHhccc-CCCeEee
Confidence 4678999999999999999999999999999999999999999999988865432 3444444333 2234455
Q ss_pred cCCCCEEEEEEEEEEEECCCCCEEEEEEEEEehHHHHHHHHHHHHhhccccccccCCchhHHHHhhcCCchhHHHHH
Q 003963 209 TKTEERVLVVATNTPFYDDDGTLVGIVCVSTDSRPFQETRAALWDTKNSDTDSNINRPRNTVTAKLGLDSQQPLQAT 285 (783)
Q Consensus 209 ~kdG~~~~v~~~~~Pi~d~~G~v~g~v~i~rDITerk~~E~~L~~~~~~~~~~~~~~~~~~l~~~l~~d~~qpl~~~ 285 (783)
.++|..+|+.+...|+.+.+ ++.+++|||+++++++... .+...++|++++||..+
T Consensus 77 ~~~~~~~~~~~~~~p~~~~~-----~~~~~~dit~~~~~~~~~~----------------~~~~~l~h~l~~pL~~i 132 (333)
T TIGR02966 77 SPINSERVLEIRIAPYGEEQ-----KLLVARDVTRLRRLEQMRR----------------DFVANVSHELRTPLTVL 132 (333)
T ss_pred cCCCCceEEEEEEEEcCCCc-----eEEEEeCchHHHHHHHHHH----------------HHHHhhhhhhcccHHHH
Confidence 68888999999999987542 6788999999998776542 27788899999999764
No 460
>PRK11360 sensory histidine kinase AtoS; Provisional
Probab=99.11 E-value=8.3e-10 Score=129.80 Aligned_cols=146 Identities=16% Similarity=0.222 Sum_probs=119.2
Q ss_pred HHHHHHHHHhCcceEEEcCCCcEEEecHHHHHHcCCChhhHcCCCccccccccccchHHHHHHHHHHhCCe-EEEEEEEE
Q 003963 130 RQYLNILQSMGQSVHIFDLSDRIIYWNRSAELLYGYSAEEALGQDAIELLTDGRDFDVAYDIVHRIKMGER-WTGQFPAK 208 (783)
Q Consensus 130 ~~~~~ile~~~d~I~i~D~~G~Ii~~N~aae~L~Gys~eEllG~~~~~l~~~~~~~~~~~~l~~~l~~g~~-~~~e~~~~ 208 (783)
..++.+++.++++|+++|.+|+|+++|+++++++||+.++++|+++.+++++... ....+.+.+..+.. ...++...
T Consensus 262 ~~~~~i~~~~~~~i~~~d~~g~i~~~N~~~~~l~g~~~~~~~g~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 339 (607)
T PRK11360 262 SLNELILESIADGVIAIDRQGKITTMNPAAEVITGLQRHELVGKPYSELFPPNTP--FASPLLDTLEHGTEHVDLEISFP 339 (607)
T ss_pred HHHHHHHHhccCeEEEEcCCCCEEEECHHHHHHhCCChHHhcCCcHHHHcCCchh--HHHHHHHHHhcCCCccceEEEEE
Confidence 4577899999999999999999999999999999999999999999998875432 23344556666655 33456667
Q ss_pred cCCCCEEEEEEEEEEEECCCCCEEEEEEEEEehHHHHHHHHHHHHhhccccccccCCchhHHHHhhcCCchhHHHHH
Q 003963 209 TKTEERVLVVATNTPFYDDDGTLVGIVCVSTDSRPFQETRAALWDTKNSDTDSNINRPRNTVTAKLGLDSQQPLQAT 285 (783)
Q Consensus 209 ~kdG~~~~v~~~~~Pi~d~~G~v~g~v~i~rDITerk~~E~~L~~~~~~~~~~~~~~~~~~l~~~l~~d~~qpl~~~ 285 (783)
.++|..+ +.++..|+.+.+|++.|++++++|||+++++|+++++....+ ....++..++|++++||+..
T Consensus 340 ~~~~~~~-~~~~~~~i~~~~g~~~~~i~~~~Dite~~~~e~~l~~~~~~~-------~l~~~~~~~~hel~~~l~~i 408 (607)
T PRK11360 340 GRDRTIE-LSVSTSLLHNTHGEMIGALVIFSDLTERKRLQRRVARQERLA-------ALGELVAGVAHEIRNPLTAI 408 (607)
T ss_pred cCCCcEE-EEEEEeeEEcCCCCEEEEEEEEeechHHHHHHHHHHHHHHHH-------HHHHHHHHHHHHhhhHHHHH
Confidence 7888777 889999999999999999999999999999999987654322 13347888999999999764
No 461
>PRK09776 putative diguanylate cyclase; Provisional
Probab=99.09 E-value=1e-09 Score=139.15 Aligned_cols=131 Identities=21% Similarity=0.208 Sum_probs=108.0
Q ss_pred CHHHHHHHHHHhCcceEEEcCCCcEEEecHHHHHHcCCChhhHcCCCcccccccccc--chHHHHHHHHHHhCCe--EEE
Q 003963 128 TDRQYLNILQSMGQSVHIFDLSDRIIYWNRSAELLYGYSAEEALGQDAIELLTDGRD--FDVAYDIVHRIKMGER--WTG 203 (783)
Q Consensus 128 ~~~~~~~ile~~~d~I~i~D~~G~Ii~~N~aae~L~Gys~eEllG~~~~~l~~~~~~--~~~~~~l~~~l~~g~~--~~~ 203 (783)
.++.++.++++++++|+++|.+|+|+++|+++++++||+.+|++|+++.++++.... ......+......+.. ...
T Consensus 534 ~~~~l~~~l~~~~~~i~~~D~~g~i~~~N~a~~~l~G~~~~e~iG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 613 (1092)
T PRK09776 534 EKERLHITLDSIGEAVVCTDMAMKVTFMNPVAEKMTGWTQEEALGVPLLTVLHITFGDNGPLMENIYSCLTSRSAAYLEQ 613 (1092)
T ss_pred HHHHHHHHHhccccEEEEECCCCeEEEEcHHHHHHhCCCHHHHcCCCHHHHcccccCCcchhhHHHHHHHhcCCCccccc
Confidence 456788899999999999999999999999999999999999999999887754322 1222234444444443 455
Q ss_pred EEEEEcCCCCEEEEEEEEEEEECCCCCEEEEEEEEEehHHHHHHHHHHHHhhccc
Q 003963 204 QFPAKTKTEERVLVVATNTPFYDDDGTLVGIVCVSTDSRPFQETRAALWDTKNSD 258 (783)
Q Consensus 204 e~~~~~kdG~~~~v~~~~~Pi~d~~G~v~g~v~i~rDITerk~~E~~L~~~~~~~ 258 (783)
+....++||..+|+..+..|+.+.+|++.|++++++|||++|+++++|+......
T Consensus 614 ~~~~~~~~G~~~~~~~~~~pi~~~~g~~~g~v~~~~DITe~k~~e~~L~~~a~~D 668 (1092)
T PRK09776 614 DVVLHCRSGGSYDVHYSITPLSTLDGENIGSVLVIQDVTESRKMLRQLSYSASHD 668 (1092)
T ss_pred eEEEEeCCCcEEEEEEEeeeeecCCCCEEEEEEEEEecchHHHHHHHHHhhcCCC
Confidence 6778899999999999999999999999999999999999999999987765543
No 462
>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins. This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain
Probab=99.06 E-value=1.1e-09 Score=112.18 Aligned_cols=142 Identities=21% Similarity=0.250 Sum_probs=104.5
Q ss_pred eeeccCCcEEEEEEEEeCCceEEEEEEecccCCHHHHHHHHHHHHHHHhCCC--CceeeEeceeecC---CceEEEEEec
Q 003963 511 EQIGQGSCGTVYHAVWYGSQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRH--PNVLLFMGAVTSP---QRLCIVTEFL 585 (783)
Q Consensus 511 ~~LG~G~fG~Vy~a~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~H--pnIv~l~~~~~~~---~~~~lV~E~~ 585 (783)
+.|+.|.++.||++...+++.+++|+....... .....+.+|+.+++.+.+ .++++++.+.... +..++||||+
T Consensus 4 ~~l~~G~~n~~~~v~~~~g~~~ilK~~~~~~~~-~~~~~~~~E~~~~~~l~~~~~~vp~~~~~~~~~~~~~~~~~v~e~i 82 (223)
T cd05154 4 RQLSGGQSNLTYLLTAGGGRRLVLRRPPPGALL-PSAHDVAREYRVLRALAGTGVPVPKVLALCEDPSVLGTPFYVMERV 82 (223)
T ss_pred eecCCCccceEEEEEecCCcceEEEeCCCcccC-cccccHHHHHHHHHHhhCCCCCCCCEEEECCCCCccCCceEEEEEe
Confidence 578999999999998765578999997654321 123467889999999975 3456777766553 3678999999
Q ss_pred CCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhC------------------------------------------
Q 003963 586 PRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHC------------------------------------------ 623 (783)
Q Consensus 586 ~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~------------------------------------------ 623 (783)
+|.+|...+.. ..++......++.+++++|..||+.
T Consensus 83 ~G~~l~~~~~~--~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (223)
T cd05154 83 DGRVLRDRLLR--PELSPEERRALARALADTLAALHSVDPAAVGLGDLGRPGGYLERQVARWRRQYDASRTDEPPAMERL 160 (223)
T ss_pred CCEecCCCCCC--CCCCHHHHHHHHHHHHHHHHHHhCCChhhcCCcccCCCCchHHHHHHHHHHHHHhhcccccHHHHHH
Confidence 99888765431 2355566666677777777777742
Q ss_pred ------------CCCEEecCCCCCCEEEcC--CCcEEEEecCCCcc
Q 003963 624 ------------NPPIIHRDLKSSNLLVDK--HWTVKVGDFGLSRL 655 (783)
Q Consensus 624 ------------~~~IvHrDIKp~NILl~~--~~~vkL~DFGla~~ 655 (783)
...++|+|+.|.|||++. ++.+.|+||+.+..
T Consensus 161 ~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~~~iID~e~~~~ 206 (223)
T cd05154 161 LRWLEAHLPADSRPGLVHGDYRLGNVLFHPDEPRVVAVLDWELATL 206 (223)
T ss_pred HHHHHhhCCCCCCcEEEECCCCcccEEEcCCCCcEEEEEecccccc
Confidence 123799999999999998 66789999998754
No 463
>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.05 E-value=2e-09 Score=105.16 Aligned_cols=133 Identities=25% Similarity=0.338 Sum_probs=99.1
Q ss_pred eeeccCCcEEEEEEEEeCCceEEEEEEecccCC-H-----HHHHHHHHHHHHHHhCCCCceeeEeceeecCCceEEEEEe
Q 003963 511 EQIGQGSCGTVYHAVWYGSQDVAVKVFSRQEYS-D-----EVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIVTEF 584 (783)
Q Consensus 511 ~~LG~G~fG~Vy~a~~~~~~~vAiK~i~~~~~~-~-----~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lV~E~ 584 (783)
..|++|+-+.+|.+.+.+. ++++|.=.++... + -...+-.+|+.++..++--.|.-.+-+..+++...|+|||
T Consensus 2 ~~i~~GAEa~i~~~~~~g~-~av~K~Ri~K~YR~p~LD~klrr~Rt~~Earil~~a~~~GV~~P~v~dvD~~~~~I~me~ 80 (204)
T COG3642 2 DLIKQGAEAIIYLTDFLGL-PAVVKERIPKRYRHPELDEKLRRERTRREARILAKAREAGVPVPIVYDVDPDNGLIVMEY 80 (204)
T ss_pred chhhCCcceeEEeeeccCc-ceEEEeecCcccCChHHHHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCEEEEEE
Confidence 3578999999999976543 5777764333322 1 1234566799999988755554444455667778999999
Q ss_pred cCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCcc
Q 003963 585 LPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRL 655 (783)
Q Consensus 585 ~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~ 655 (783)
++|..|.+++... ...++..+-.-+.-||..| |||+||.++||++..+ .+.++|||++..
T Consensus 81 I~G~~lkd~l~~~--------~~~~~r~vG~~vg~lH~~g--ivHGDLTtsNiIl~~~-~i~~IDfGLg~~ 140 (204)
T COG3642 81 IEGELLKDALEEA--------RPDLLREVGRLVGKLHKAG--IVHGDLTTSNIILSGG-RIYFIDFGLGEF 140 (204)
T ss_pred eCChhHHHHHHhc--------chHHHHHHHHHHHHHHhcC--eecCCCccceEEEeCC-cEEEEECCcccc
Confidence 9998899888764 1345566667788899999 9999999999999877 499999999863
No 464
>PF13596 PAS_10: PAS domain; PDB: 3CAX_A 2QKP_D.
Probab=99.01 E-value=1.9e-09 Score=97.74 Aligned_cols=106 Identities=22% Similarity=0.317 Sum_probs=77.4
Q ss_pred HHHHHHHhCcceEEEcCCCcEEEecHHHHHHcCCChhhHcCCCccccccccccchHHHHHHHHHHhCCeEEEEEEEEcCC
Q 003963 132 YLNILQSMGQSVHIFDLSDRIIYWNRSAELLYGYSAEEALGQDAIELLTDGRDFDVAYDIVHRIKMGERWTGQFPAKTKT 211 (783)
Q Consensus 132 ~~~ile~~~d~I~i~D~~G~Ii~~N~aae~L~Gys~eEllG~~~~~l~~~~~~~~~~~~l~~~l~~g~~~~~e~~~~~kd 211 (783)
++.+|++++.+++++|.+++|.|+|+++.++++... ..+|+++.++.++.. ......+.+.+..|+....+.... .+
T Consensus 1 L~~il~s~~~~i~~vD~~~~I~~~n~~a~~~f~~~~-~~iGr~l~~~~~~~~-~~~l~~~i~~~~~~~~~~~~~~~~-~~ 77 (106)
T PF13596_consen 1 LNNILDSMPIGIIFVDRNLRIRYFNPAAARLFNLSP-SDIGRPLFDIHPPLS-YPNLKKIIEQVRSGKEEEFEIVIP-NG 77 (106)
T ss_dssp HHHHHHHSSSEEEEEETTSBEEEE-SCGC-SS---G-GGTTSBCCCSS-HHH-HHHHHHHHHHHHTTSBSEEEEEEE-ET
T ss_pred ChHHHhcCCCCEEEEcCCCeEEEeChhHhhhcCCCh-HHCCCCHHHcCCccc-hHHHHHHHHHHHcCCCceEEEEec-CC
Confidence 468999999999999999999999999999999764 568999999887633 344455667777887644333332 44
Q ss_pred CCEEEEEEEEEEEECCCCCEEEEEEEEEehH
Q 003963 212 EERVLVVATNTPFYDDDGTLVGIVCVSTDSR 242 (783)
Q Consensus 212 G~~~~v~~~~~Pi~d~~G~v~g~v~i~rDIT 242 (783)
| .|+.+.+.|+++.+|++.|++.++.|||
T Consensus 78 ~--~~~~~~~~P~~~~~g~~~G~v~~~~DIT 106 (106)
T PF13596_consen 78 G--RWYLVRYRPYRDEDGEYAGAVITFQDIT 106 (106)
T ss_dssp T--EEEEEEEEEEE-TTS-EEEEEEEEEE-G
T ss_pred C--EEEEEEEEEEECCCCCEEEEEEEEEecC
Confidence 4 4667889999999999999999999998
No 465
>COG5002 VicK Signal transduction histidine kinase [Signal transduction mechanisms]
Probab=99.01 E-value=4e-09 Score=110.48 Aligned_cols=132 Identities=20% Similarity=0.293 Sum_probs=109.3
Q ss_pred HHHHHHHHHhCcceEEEcCCCcEEEecHHHHHHcCCChhhHcCCCccccccccccchHHHHHHHHHHhCCeEEEEEEEEc
Q 003963 130 RQYLNILQSMGQSVHIFDLSDRIIYWNRSAELLYGYSAEEALGQDAIELLTDGRDFDVAYDIVHRIKMGERWTGQFPAKT 209 (783)
Q Consensus 130 ~~~~~ile~~~d~I~i~D~~G~Ii~~N~aae~L~Gys~eEllG~~~~~l~~~~~~~~~~~~l~~~l~~g~~~~~e~~~~~ 209 (783)
+.+..++..+.|||+.+|..|+|+.+|..|++++|.+.++++|+++.+++.-++... +.+.+........+. .
T Consensus 111 ~kL~SvlayMtDGViATdRrG~iI~iN~~A~k~L~~~~E~~~~~~i~elL~i~d~y~----~~dL~e~~~s~lld~---~ 183 (459)
T COG5002 111 RKLDSVLAYMTDGVIATDRRGKIILINKPALKMLGVSKEDALGRSILELLKIEDTYT----FEDLVEKNDSLLLDS---S 183 (459)
T ss_pred HHHHHHHHHHcCceEeecCCCcEEEeccHHHHHhCcCHHHHhcccHHHHhCCcccee----HHHHHhcCCcEEEee---c
Confidence 568889999999999999999999999999999999999999999999987665433 233333333333222 2
Q ss_pred CCCCEEEEEEEEEEEECCCCCEEEEEEEEEehHHHHHHHHHHHHhhccccccccCCchhHHHHhhcCCchhHHHH
Q 003963 210 KTEERVLVVATNTPFYDDDGTLVGIVCVSTDSRPFQETRAALWDTKNSDTDSNINRPRNTVTAKLGLDSQQPLQA 284 (783)
Q Consensus 210 kdG~~~~v~~~~~Pi~d~~G~v~g~v~i~rDITerk~~E~~L~~~~~~~~~~~~~~~~~~l~~~l~~d~~qpl~~ 284 (783)
.+++.+.+.+.-+.+.-+.|-+.|+|++..|+||+.+.|++.++ |.+.++|+++.||.+
T Consensus 184 ~~~E~~~lrv~Fs~i~rEsGfisGlIaVlhDvTEqek~e~ErRe----------------fvanvSHElRTPlts 242 (459)
T COG5002 184 DEEEGYVLRVNFSVIQRESGFISGLIAVLHDVTEQEKVERERRE----------------FVANVSHELRTPLTS 242 (459)
T ss_pred CCCccEEEEEEEEEEeecccccceeEEEEecccHHHHHHHHHHH----------------HHHhcchhhcCchHH
Confidence 26777888888888988999999999999999999999888755 888999999999977
No 466
>PRK11359 cyclic-di-GMP phosphodiesterase; Provisional
Probab=98.98 E-value=3.4e-09 Score=129.87 Aligned_cols=125 Identities=23% Similarity=0.273 Sum_probs=105.2
Q ss_pred HHHHHHHHHHhCcceEEEcCCCcEEEecHHHHHHcCCChhhHcCCCcccccccccc-chHHHHHHHHHHhCCeEEEEEEE
Q 003963 129 DRQYLNILQSMGQSVHIFDLSDRIIYWNRSAELLYGYSAEEALGQDAIELLTDGRD-FDVAYDIVHRIKMGERWTGQFPA 207 (783)
Q Consensus 129 ~~~~~~ile~~~d~I~i~D~~G~Ii~~N~aae~L~Gys~eEllG~~~~~l~~~~~~-~~~~~~l~~~l~~g~~~~~e~~~ 207 (783)
.+.+..+++.++++|+++|.+|+|+++|+++++++||+.++++|+++.+++++... ......+...+..+..+..+.+.
T Consensus 135 ~~~~~~~~~~~~~~i~~~d~~g~i~~~N~~~~~l~G~~~~e~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~ 214 (799)
T PRK11359 135 TRQLIIAVDHLDRPVIVLDPERRIVQCNRAFTEMFGYCISEASGMQPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLL 214 (799)
T ss_pred HHHHHHHHhcCCCcEEEEcCCCcEEEEChhhHhhhCCCHHHHCCCChHHhcCCCCCcHHHHHHHHHhhccCCCCcceeEE
Confidence 35566789999999999999999999999999999999999999999887654433 23333455666666667778888
Q ss_pred EcCCCCEEEEEEEEEEEECCCCCEEEEEEEEEehHHHHHHHHHHHH
Q 003963 208 KTKTEERVLVVATNTPFYDDDGTLVGIVCVSTDSRPFQETRAALWD 253 (783)
Q Consensus 208 ~~kdG~~~~v~~~~~Pi~d~~G~v~g~v~i~rDITerk~~E~~L~~ 253 (783)
.+++|..+|+.++..|+.+.+|.+.+++++++|||+++++++..+.
T Consensus 215 ~~~dG~~~~~~~~~~~v~d~~g~~~~~~~~~~DITerk~~e~~~~~ 260 (799)
T PRK11359 215 LTRTGEKIWIKASISPVYDVLAHLQNLVMTFSDITEERQIRQLEGN 260 (799)
T ss_pred eCCCCCEEEEEeeeeeeecCCCceeEEEEEeehhhhHHHHHHHHHH
Confidence 8999999999999999999999999999999999999988765543
No 467
>PRK13560 hypothetical protein; Provisional
Probab=98.98 E-value=4.2e-09 Score=128.87 Aligned_cols=147 Identities=10% Similarity=0.086 Sum_probs=116.9
Q ss_pred HHHHHHHHhCcceEEEcCC-CcEEEecHHHHHHcCCChhhHcCC--CccccccccccchHHHHHHHHHHhCC-eEEEEEE
Q 003963 131 QYLNILQSMGQSVHIFDLS-DRIIYWNRSAELLYGYSAEEALGQ--DAIELLTDGRDFDVAYDIVHRIKMGE-RWTGQFP 206 (783)
Q Consensus 131 ~~~~ile~~~d~I~i~D~~-G~Ii~~N~aae~L~Gys~eEllG~--~~~~l~~~~~~~~~~~~l~~~l~~g~-~~~~e~~ 206 (783)
..+.++++.+++++..+.+ |..+.+|.....++||+.+++++. .+..++++++.......+...+..|. .+..+++
T Consensus 474 ~~~~~~e~~~~~i~~~~~~~~~~~~~~~~~~~~~G~~~~e~~~~~~~~~~~~~p~d~~~~~~~~~~~~~~g~~~~~~e~r 553 (807)
T PRK13560 474 LANLIVENSPLVLFRWKAEEGWPVELVSKNITQFGYEPDEFISGKRMFAAIIHPADLEQVAAEVAEFAAQGVDRFEQEYR 553 (807)
T ss_pred HHHHHHhcCCceEEEEecCCCceEEEecchhhhcCCCHHHhhcccchHhhhcChhhHHHHHHHHHHHHhcCCccceeEEE
Confidence 3467899999999887754 556666777788999999999863 34456666665444445555566554 3777889
Q ss_pred EEcCCCCEEEEEEEEEEEECCCCCEEEEEEEEEehHHHHHHHHHHHHhhccccccccCCchhHHHHhhcCCchhHHHHHH
Q 003963 207 AKTKTEERVLVVATNTPFYDDDGTLVGIVCVSTDSRPFQETRAALWDTKNSDTDSNINRPRNTVTAKLGLDSQQPLQATI 286 (783)
Q Consensus 207 ~~~kdG~~~~v~~~~~Pi~d~~G~v~g~v~i~rDITerk~~E~~L~~~~~~~~~~~~~~~~~~l~~~l~~d~~qpl~~~i 286 (783)
+.++||..+|+.....|++|.+|++.+++++++|||++|++|++|+....+ ++.|++.++||+++||+.+.
T Consensus 554 ~~~~dG~~~w~~~~~~~~~d~~G~~~~~~g~~~DITerK~aE~~L~~a~~~---------~~~~l~~isHelrnpL~~I~ 624 (807)
T PRK13560 554 ILGKGGAVCWIDDQSAAERDEEGQISHFEGIVIDISERKHAEEKIKAALTE---------KEVLLKEIHHRVKNNLQIIS 624 (807)
T ss_pred EEcCCCCEEEEEecceeeeCCCCCEEEEEEEEechHHHHHHHHHHHHHHHH---------HHHHHHHhHHHHhChHHHHH
Confidence 999999999999999999999999999999999999999999999765432 44589999999999998653
No 468
>cd00130 PAS PAS domain; PAS motifs appear in archaea, eubacteria and eukarya. Probably the most surprising identification of a PAS domain was that in EAG-like K+-channels. PAS domains have been found to bind ligands, and to act as sensors for light and oxygen in signal transduction.
Probab=98.94 E-value=2.2e-08 Score=82.69 Aligned_cols=103 Identities=28% Similarity=0.460 Sum_probs=86.2
Q ss_pred hCcceEEEcCCCcEEEecHHHHHHcCCChhhHcCCCccccccccccchHHHHHHHHHHhCCeEEEEEEEEcCCCCEEEEE
Q 003963 139 MGQSVHIFDLSDRIIYWNRSAELLYGYSAEEALGQDAIELLTDGRDFDVAYDIVHRIKMGERWTGQFPAKTKTEERVLVV 218 (783)
Q Consensus 139 ~~d~I~i~D~~G~Ii~~N~aae~L~Gys~eEllG~~~~~l~~~~~~~~~~~~l~~~l~~g~~~~~e~~~~~kdG~~~~v~ 218 (783)
++++++++|.+|.++++|+++++++|++..+++|+.+..++++.........+...+..+.....+......+|..+|+.
T Consensus 1 ~~~~i~~~d~~~~~~~~n~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (103)
T cd00130 1 LPDGVIVLDLDGRILYANPAAEQLLGYSPEELIGKSLLDLIHPEDREELRERLENLLSGGEPVTLEVRLRRKDGSVIWVL 80 (103)
T ss_pred CCceEEEECCCCcEEEECHHHHHHhCCCHHHHcCccHHHhcCCccchHHHHHHHHHHhcCcCeEEEEEEEccCCCEEEEE
Confidence 35789999999999999999999999999999999998888776654444444555555566777778888889999999
Q ss_pred EEEEEEECCCCCEEEEEEEEEeh
Q 003963 219 ATNTPFYDDDGTLVGIVCVSTDS 241 (783)
Q Consensus 219 ~~~~Pi~d~~G~v~g~v~i~rDI 241 (783)
....++.+.+|...+++++++||
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~di 103 (103)
T cd00130 81 VSLTPIRDEGGEVIGLLGVVRDI 103 (103)
T ss_pred EEEEEEecCCCCEEEEEEEEecC
Confidence 99999998888999999999886
No 469
>PF08447 PAS_3: PAS fold; InterPro: IPR013655 The PAS fold corresponds to the structural domain that has previously been defined as PAS and PAC motifs []. The PAS fold appears in archaea, eubacteria and eukarya. The PAS domain contains a sensory box, or S-box domain that occupies the central portion of the PAS domain but is more widely distributed. It is often tandemly repeated. Known prosthetic groups bound in the S-box domain include haem in the oxygen sensor FixL [], FAD in the redox potential sensor NifL [], and a 4-hydroxycinnamyl chromophore in photoactive yellow protein []. Proteins containing the domain often contain other regulatory domains such as response regulator or sensor histidine kinase domains. Other S-box proteins include phytochromes and the aryl hydrocarbon receptor nuclear translocator. This domain has been found in the gene product of the madA gene of the filamentous zygomycete fungus Phycomyces blakesleeanus. It has been shown that MadA encodes a blue-light photoreceptor for phototropism and other light responses. The gene is involved in the phototropic responses associated with sporangiophore growth; they exhibit phototropism by bending toward near-UV and blue wavelengths and away from far-UV wavelengths in a manner that is physiologically similar to plant phototropic responses [].; GO: 0005515 protein binding; PDB: 3NJA_D 3H9W_A 3GDI_B 3ICY_A 3EEH_A 3MR0_B.
Probab=98.92 E-value=1e-08 Score=89.62 Aligned_cols=86 Identities=26% Similarity=0.471 Sum_probs=72.3
Q ss_pred EEEecHHHHHHcCCChhhHcCCC----ccccccccccchHHHHHHH-HHHhCCeEEEEEEEEcCCCCEEEEEEEEEEEEC
Q 003963 152 IIYWNRSAELLYGYSAEEALGQD----AIELLTDGRDFDVAYDIVH-RIKMGERWTGQFPAKTKTEERVLVVATNTPFYD 226 (783)
Q Consensus 152 Ii~~N~aae~L~Gys~eEllG~~----~~~l~~~~~~~~~~~~l~~-~l~~g~~~~~e~~~~~kdG~~~~v~~~~~Pi~d 226 (783)
|+|||+.+++|+||+.+++ +.. +..+++|++.......+.. ....+..+..+++++++||+.+|+.....+++|
T Consensus 1 ~i~~s~~~~~i~G~~~~~~-~~~~~~~~~~~ihpdD~~~~~~~~~~~~~~~~~~~~~e~R~~~~~G~~~wi~~~~~~~~d 79 (91)
T PF08447_consen 1 IIYWSDNFYEIFGYSPEEI-GKPDFEEWLERIHPDDRERVRQAIQQAALQNGEPFEIEYRIRRKDGEYRWIEVRGRPIFD 79 (91)
T ss_dssp -EEE-THHHHHHTS-HHHH-TCBEHHHHHHHB-TTTHHHHHHHHHHHHHHTT-EEEEEEEEEGTTSTEEEEEEEEEEEET
T ss_pred CEEEeHHHHHHhCCCHHHh-ccCCHHHHHhhcCHHHHHHHHHHHHHHhhccCcceEEEEEEECCCCCEEEEEEEEEEEEC
Confidence 7899999999999999999 777 7788899988777777777 677788899999999999999999999999999
Q ss_pred CCCCEEEEEEEE
Q 003963 227 DDGTLVGIVCVS 238 (783)
Q Consensus 227 ~~G~v~g~v~i~ 238 (783)
.+|+++.++++.
T Consensus 80 ~~g~~~~~~Gv~ 91 (91)
T PF08447_consen 80 ENGKPIRIIGVI 91 (91)
T ss_dssp TTS-EEEEEEEE
T ss_pred CCCCEEEEEEEC
Confidence 999999998874
No 470
>KOG3087 consensus Serine/threonine protein kinase [General function prediction only]
Probab=98.90 E-value=1.6e-08 Score=98.35 Aligned_cols=144 Identities=23% Similarity=0.217 Sum_probs=103.4
Q ss_pred EeeeeccCCcEEEEEEEEeCCceEEEEEEecccCC------HHHHHHHHHHHHHHHhCCCCceeeEeceeecCCceEEEE
Q 003963 509 IGEQIGQGSCGTVYHAVWYGSQDVAVKVFSRQEYS------DEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIVT 582 (783)
Q Consensus 509 i~~~LG~G~fG~Vy~a~~~~~~~vAiK~i~~~~~~------~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lV~ 582 (783)
.+..|-+|+-+.|+++.+.+ +.++||.-...... .-..++.++|+++|.++.--.|.-..-++.+...-+|+|
T Consensus 11 ~l~likQGAEArv~~~~~~G-e~~iIK~Rf~K~YRHP~LD~kLtr~Rt~~Ear~l~k~~~~GI~~P~l~~~D~~~~~i~M 89 (229)
T KOG3087|consen 11 SLELIKQGAEARVPRGSFSG-EAAIIKERFSKRYRHPALDQKLTRKRTKQEARLLAKCRALGIPAPRLIFIDTYGGQIYM 89 (229)
T ss_pred cceeeeccceeeEeeeccCC-ceeEEeecccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCCceEEEEecCCCeEEE
Confidence 45678899999999998765 45666653322221 123456788999999886444443333455566678999
Q ss_pred EecCC-CCHHHHHhhcCCcchHHHH-HHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCC---cEEEEecCCCcc
Q 003963 583 EFLPR-GSLFRLLQRNTTKLDWRRR-ILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHW---TVKVGDFGLSRL 655 (783)
Q Consensus 583 E~~~g-gsL~~~L~~~~~~l~~~~~-~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~---~vkL~DFGla~~ 655 (783)
||++| .++.+++......-..... ..++..|-+.+.-||..+ |||+||..+||++..++ .+.|+|||++..
T Consensus 90 E~~~g~~~vk~~i~~~~~~~~~d~~~~~~~~~iG~~igklH~nd--iiHGDLTTSNill~~~~~~~~~~lIdfgls~~ 165 (229)
T KOG3087|consen 90 EFIDGASTVKDFILSTMEDESEDEGLAELARRIGELIGKLHDND--IIHGDLTTSNILLRSDGNQITPILIDFGLSSV 165 (229)
T ss_pred EeccchhHHHHHHHHHccCcccchhHHHHHHHHHHHHHHhhhCC--eecccccccceEEecCCCcCceEEEeecchhc
Confidence 99976 4788888654433333333 678888999999999998 99999999999996543 468999999854
No 471
>COG3829 RocR Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains [Transcription / Signal transduction mechanisms]
Probab=98.88 E-value=1.1e-08 Score=114.25 Aligned_cols=116 Identities=23% Similarity=0.453 Sum_probs=94.6
Q ss_pred HHHHHHHHHhCcceEEEcCCCcEEEecHHHHHHcCCChhhHcCCCccccccccccchHHHHHHHHHHhCCeEEEEEEEEc
Q 003963 130 RQYLNILQSMGQSVHIFDLSDRIIYWNRSAELLYGYSAEEALGQDAIELLTDGRDFDVAYDIVHRIKMGERWTGQFPAKT 209 (783)
Q Consensus 130 ~~~~~ile~~~d~I~i~D~~G~Ii~~N~aae~L~Gys~eEllG~~~~~l~~~~~~~~~~~~l~~~l~~g~~~~~e~~~~~ 209 (783)
+.|+.|++.+.++|+++|.+|+|+++|+++..++|++.++++|+++.+++.... ...+.+++..+++.......+.
T Consensus 117 ~~l~~il~~~~~~l~vvD~~G~~i~~N~~~~~~~gl~~e~~~gk~~~~v~~~~~----~s~~l~vl~~~kp~~~~~~~~~ 192 (560)
T COG3829 117 QRLEAILDSIDDGLLVVDEDGIIIYYNKAYAKLLGLSPEEVLGKHLLDVVSAGE----DSTLLEVLRTGKPIRDVVQTYN 192 (560)
T ss_pred HHHHHHHhhccCceEEEcCCCcEEEEcHHHHHHhCCCHHHHcCCcHHHHHhccC----CceehhhhhcCCcceeeeeeec
Confidence 668899999999999999999999999999999999999999999999871111 1126788999998777766665
Q ss_pred CCCCEEEEEEEEEEEECCCCCEEEEEEEEEehHHHHHHHHHHHHh
Q 003963 210 KTEERVLVVATNTPFYDDDGTLVGIVCVSTDSRPFQETRAALWDT 254 (783)
Q Consensus 210 kdG~~~~v~~~~~Pi~d~~G~v~g~v~i~rDITerk~~E~~L~~~ 254 (783)
.+.. ..+..|++ .+|.+.|+|.+++|+++.+.+..++.+.
T Consensus 193 ~~~~----i~~~~pv~-~~g~l~G~v~~~~~~~~l~~l~~~~~~~ 232 (560)
T COG3829 193 GNKI----IVNVAPVY-ADGQLIGVVGISKDVSELERLTRELEES 232 (560)
T ss_pred CCce----eEeeccEe-cCCcEEEEEEeecchHHHHHHHHHHHHH
Confidence 5433 45677876 5779999999999999999887776543
No 472
>KOG3741 consensus Poly(A) ribonuclease subunit [RNA processing and modification]
Probab=98.88 E-value=9.2e-08 Score=105.73 Aligned_cols=219 Identities=17% Similarity=0.212 Sum_probs=153.6
Q ss_pred CcEEEEEEEEe-CCceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEeceeec----CCceEEEEEecCC-CCH
Q 003963 517 SCGTVYHAVWY-GSQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTS----PQRLCIVTEFLPR-GSL 590 (783)
Q Consensus 517 ~fG~Vy~a~~~-~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~----~~~~~lV~E~~~g-gsL 590 (783)
.-.+.|++... ++..|++|.+...+.... .....-++.++++.|+|||+|.++|.. +..+++|++|.++ ++|
T Consensus 288 ~~~Ttyk~~s~~DG~~YvLkRlhg~r~~~~--nk~t~lve~wkkl~h~NvV~frevf~t~tF~D~SlvlvYDYyP~s~TL 365 (655)
T KOG3741|consen 288 FSITTYKATSNVDGNAYVLKRLHGDRDQST--NKDTSLVEAWKKLCHTNVVPFREVFLTYTFGDLSLVLVYDYYPSSPTL 365 (655)
T ss_pred ccceeEeeeeccCCceeeeeeeccccccCc--ccchHHHHHHHHhccCceeehhhhhhhhccCcceEEEEEecCCCCchH
Confidence 45677888754 466799999843321110 011234788999999999999998863 4568999999986 477
Q ss_pred HHHHhh--------------cCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCccc
Q 003963 591 FRLLQR--------------NTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLK 656 (783)
Q Consensus 591 ~~~L~~--------------~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~ 656 (783)
+++... .+.+.++..+|.++.||..||.++|+.| +.-+-|.|.+||++.+.+++|.-.|+....
T Consensus 366 ~d~~F~~~~~t~~~n~~~~~~~~~~~e~~lW~y~~QLtaaL~sIHssG--LAck~L~~~kIlv~G~~RIriS~C~i~Dvl 443 (655)
T KOG3741|consen 366 YDLYFANPPFTKRTNSFYPSQNLKAPEEVLWSYISQLTAALYSIHSSG--LACKTLDLKKILVTGKMRIRISGCGIMDVL 443 (655)
T ss_pred HHHHccCCccccccccccccCCCCchHHHHHHHHHHHHHHHHHHHhcC--ceeecccHhHeEeeCcceEEEecccceeee
Confidence 776532 1344788999999999999999999999 888999999999999989999877766544
Q ss_pred ccccccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCC-CCCCChHHHHHHhhcccccccCCCCCCHHH
Q 003963 657 HETYLTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIP-WDNLNSMQVIGAVGFMNQRLEIPKDVDPRW 735 (783)
Q Consensus 657 ~~~~~~~~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~elltG~~P-f~~~~~~~~~~~i~~~~~~~~~~~~~s~~l 735 (783)
..... +-+.+ -.+-|.=.||.+++.|.||..- +......+. . ...+...++.++
T Consensus 444 ~~d~~--------------~~le~---~Qq~D~~~lG~ll~aLAt~~~ns~~~d~~~~s--~------~~~I~~~yS~D~ 498 (655)
T KOG3741|consen 444 QEDPT--------------EPLES---QQQNDLRDLGLLLLALATGTENSNRTDSTQSS--H------LTRITTTYSTDL 498 (655)
T ss_pred cCCCC--------------cchhH---HhhhhHHHHHHHHHHHhhcccccccccchHHH--H------HHHhhhhhhHHH
Confidence 33210 11111 1456999999999999999543 222111111 0 122345688899
Q ss_pred HHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHh
Q 003963 736 AAIVESCWHSDPQCRPSFQELVDKLRDLQRQYF 768 (783)
Q Consensus 736 ~~LI~~cL~~dP~~RPsa~ell~~L~~L~~~~f 768 (783)
+++|..+....+++ -++.+++.+ +...||
T Consensus 499 rn~v~yl~s~~~~~-ksI~~llp~---~~~~ff 527 (655)
T KOG3741|consen 499 RNVVEYLESLNFRE-KSIQDLLPM---IGSRFF 527 (655)
T ss_pred HHHHHHHHhcCccc-ccHHHHHHH---HHHHHH
Confidence 99999998888887 677777655 344444
No 473
>KOG2137 consensus Protein kinase [Signal transduction mechanisms]
Probab=98.86 E-value=6.1e-10 Score=126.82 Aligned_cols=144 Identities=16% Similarity=0.276 Sum_probs=107.5
Q ss_pred HHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCcccccccc--c-------ccCCCCCCcccCcccccCCC
Q 003963 612 DIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETYL--T-------TKTGKGTPQWMAPEVLRNEP 682 (783)
Q Consensus 612 qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~~--~-------~~~~~Gt~~Y~aPE~~~~~~ 682 (783)
+++.||.|+|.. .++||++|.|++|.++.++.+||+.|+++........ . .....-...|.|||.+.+..
T Consensus 107 ~v~dgl~flh~s-Ak~VH~ni~p~~i~~na~~~wkl~Gf~f~v~~~~~~~~p~~~yd~~lp~~~~~~~~f~apE~~~~~~ 185 (700)
T KOG2137|consen 107 NVADGLAFLHRS-AKVVHGNIQPEAIVVNANGDWKLAGFSFCVNANGPTEYPFSEYDPPLPLLLQPHLNFLAPEYLLGTT 185 (700)
T ss_pred cccchhhhhccC-cceeecccchhheeeccCcceeeccchhhhccCCCCccccccCCCCCChhhccCcccccchhhcccc
Confidence 445899999976 3599999999999999999999999998764433111 0 01112356899999999988
Q ss_pred CCchhHHHHHHHHHHHHH-cCCCCCCCCChHHHHHH--hhcccccccCCCCCCHHHHHHHHHhhhhCCCCCCCHHHH
Q 003963 683 SDEKSDVYSFGVILWELA-TEKIPWDNLNSMQVIGA--VGFMNQRLEIPKDVDPRWAAIVESCWHSDPQCRPSFQEL 756 (783)
Q Consensus 683 ~s~~sDIwSLG~il~ell-tG~~Pf~~~~~~~~~~~--i~~~~~~~~~~~~~s~~l~~LI~~cL~~dP~~RPsa~el 756 (783)
.+.++|+|||||++|-++ .|+..+........... ............+++.++++=|.+++..++..||++..+
T Consensus 186 ~~~~sd~fSlG~li~~i~~~gk~i~~a~~~~~~~~~~~~~~~~~~~~~s~~~p~el~~~l~k~l~~~~~~rp~~~~l 262 (700)
T KOG2137|consen 186 NTPASDVFSLGVLIYTIYNGGKSIIAANGGLLSYSFSRNLLNAGAFGYSNNLPSELRESLKKLLNGDSAVRPTLDLL 262 (700)
T ss_pred ccccccceeeeeEEEEEecCCcchhhccCCcchhhhhhcccccccccccccCcHHHHHHHHHHhcCCcccCcchhhh
Confidence 899999999999999999 56665544322221111 111223445668899999999999999999999988777
No 474
>PRK11086 sensory histidine kinase DcuS; Provisional
Probab=98.83 E-value=6.9e-08 Score=112.76 Aligned_cols=136 Identities=16% Similarity=0.239 Sum_probs=101.2
Q ss_pred HHHHHHHHHhCcceEEEcCCCcEEEecHHHHHHcCCC---hhhHcCCCccccccccccchHHHHHHHHHHhCCeEEEEEE
Q 003963 130 RQYLNILQSMGQSVHIFDLSDRIIYWNRSAELLYGYS---AEEALGQDAIELLTDGRDFDVAYDIVHRIKMGERWTGQFP 206 (783)
Q Consensus 130 ~~~~~ile~~~d~I~i~D~~G~Ii~~N~aae~L~Gys---~eEllG~~~~~l~~~~~~~~~~~~l~~~l~~g~~~~~e~~ 206 (783)
+.++.++++++++|+++|.+|+|+++|++|++++|++ ..+.+|+.+..+.+.. .+..++..+........
T Consensus 221 ~~~~~il~~~~~gIi~~D~~g~I~~~N~~a~~llg~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~ 293 (542)
T PRK11086 221 EQRQAMLQSIKEGVIAVDDRGEVTLINDEAKRLFNYKKGLEDDPLGTDVESWMPVS-------RLKEVLRTGTPRRDEEI 293 (542)
T ss_pred HHHHHHHHHhcCcEEEECCCCeEEEEhHHHHHHhCCCcCCcccccCCcHHHhCCch-------hHHHHHhcCCCccceEE
Confidence 3457899999999999999999999999999999875 3567788777665422 24556666665433222
Q ss_pred EEcCCCCEEEEEEEEEEEECCCCCEEEEEEEEEehHHHHHHHHHHHHhhccccccccCCchhHHHHhhcCCchhHHHHHH
Q 003963 207 AKTKTEERVLVVATNTPFYDDDGTLVGIVCVSTDSRPFQETRAALWDTKNSDTDSNINRPRNTVTAKLGLDSQQPLQATI 286 (783)
Q Consensus 207 ~~~kdG~~~~v~~~~~Pi~d~~G~v~g~v~i~rDITerk~~E~~L~~~~~~~~~~~~~~~~~~l~~~l~~d~~qpl~~~i 286 (783)
..+|. ++.+...|+.+ +|.+.|++.+++|+|+.+++++++....... ..+...+||++.||+.+.
T Consensus 294 --~~~g~--~~~~~~~pi~~-~g~~~g~v~~~rDite~~~l~~~l~~~~~~~----------~~l~~~sHel~npL~~I~ 358 (542)
T PRK11086 294 --NINGR--LLLTNTVPVRV-NGEIIGAIATFRDKTEVRQLAQRLDGMVNYA----------DALRAQSHEFMNKLHVIL 358 (542)
T ss_pred --EECCE--EEEEEEEEEeE-CCEEEEEEEEEEEchHHHHHHHHHHHHHHHH----------HHHHhhchhhcCHHHHHH
Confidence 22453 44566789987 8899999999999999999988886654321 244567899999998754
Q ss_pred H
Q 003963 287 A 287 (783)
Q Consensus 287 ~ 287 (783)
.
T Consensus 359 g 359 (542)
T PRK11086 359 G 359 (542)
T ss_pred H
Confidence 3
No 475
>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.
Probab=98.81 E-value=3.6e-08 Score=98.85 Aligned_cols=127 Identities=28% Similarity=0.296 Sum_probs=82.9
Q ss_pred EEEEEEEeCCceEEEEEEecccC-----------------------C-HHHHHHHHHHHHHHHhCCCC--ceeeEeceee
Q 003963 520 TVYHAVWYGSQDVAVKVFSRQEY-----------------------S-DEVIHSFRQEVSLMKRLRHP--NVLLFMGAVT 573 (783)
Q Consensus 520 ~Vy~a~~~~~~~vAiK~i~~~~~-----------------------~-~~~~~~~~~Ei~il~~l~Hp--nIv~l~~~~~ 573 (783)
.||.|...++..+|||+.+.... . ........+|.+.|..+..- ++++++.+.
T Consensus 1 ~Vy~~~~~~~~~~a~K~~r~~~~~Fk~~~~y~~~~~r~~~~~~~~~~~~~~~~~~~~E~~~L~~l~~~Gv~vP~p~~~~- 79 (188)
T PF01163_consen 1 DVYHAIDPDGEEVAVKIYRTGRTSFKRRKKYRDYDYRFKKYRHKSSWRYLIREWAKKEFRNLKRLYEAGVPVPKPYDYN- 79 (188)
T ss_dssp EEEEEEECTTEEEEEEEE-S---SS-HHHHHTTTSTTSTTC--G--CHHHHHHHHHHHHHHHHHCCCTT-SS--EEEEE-
T ss_pred CEEEEECCCCCEEEEEEeccCceEEEEeeeeecccchhcccccccCHHHHHHHHHHHHHHHHHHHHHCCccCCcEEEEe-
Confidence 48999988888999999743200 1 12345677899999999765 566776543
Q ss_pred cCCceEEEEEecC--CCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHH-HHhCCCCEEecCCCCCCEEEcCCCcEEEEec
Q 003963 574 SPQRLCIVTEFLP--RGSLFRLLQRNTTKLDWRRRILMALDIARGVSY-LHHCNPPIIHRDLKSSNLLVDKHWTVKVGDF 650 (783)
Q Consensus 574 ~~~~~~lV~E~~~--ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~-LH~~~~~IvHrDIKp~NILl~~~~~vkL~DF 650 (783)
..+|||||++ |..+..+.... ++......++.+++..+.. +|..| |||+|+.+.|||++++ .+.|+||
T Consensus 80 ---~~~ivME~I~~~G~~~~~l~~~~---~~~~~~~~~~~~il~~~~~~~~~~g--ivHGDLs~~NIlv~~~-~~~iIDf 150 (188)
T PF01163_consen 80 ---RNVIVMEYIGEDGVPLPRLKDVD---LSPEEPKELLEEILEEIIKMLHKAG--IVHGDLSEYNILVDDG-KVYIIDF 150 (188)
T ss_dssp ---TTEEEEE--EETTEEGGCHHHCG---GGGSTHHHHHHHHHHHHHHHHHCTT--EEESS-STTSEEEETT-CEEE--G
T ss_pred ---CCEEEEEecCCCccchhhHHhcc---ccchhHHHHHHHHHHHHHHHHHhcC--ceecCCChhhEEeecc-eEEEEec
Confidence 3589999998 55554443321 2233445566677775555 57888 9999999999999988 9999999
Q ss_pred CCCccc
Q 003963 651 GLSRLK 656 (783)
Q Consensus 651 Gla~~~ 656 (783)
|.+...
T Consensus 151 ~qav~~ 156 (188)
T PF01163_consen 151 GQAVDS 156 (188)
T ss_dssp TTEEET
T ss_pred Ccceec
Confidence 987543
No 476
>PRK11006 phoR phosphate regulon sensor protein; Provisional
Probab=98.79 E-value=2.9e-08 Score=112.95 Aligned_cols=127 Identities=17% Similarity=0.237 Sum_probs=93.1
Q ss_pred HHHHHHHHHHhCcceEEEcCCCcEEEecHHHHHHcCCChhhHcCCCccccccccccchHHHHHHHHHHhCCeEEEEEEEE
Q 003963 129 DRQYLNILQSMGQSVHIFDLSDRIIYWNRSAELLYGYSAEEALGQDAIELLTDGRDFDVAYDIVHRIKMGERWTGQFPAK 208 (783)
Q Consensus 129 ~~~~~~ile~~~d~I~i~D~~G~Ii~~N~aae~L~Gys~eEllG~~~~~l~~~~~~~~~~~~l~~~l~~g~~~~~e~~~~ 208 (783)
.+.|+.++++++++|+++|.+|+|++||++|++++||+.++++|+++.+++.... +...+..... .......
T Consensus 97 ~~~~~~~~~~~~~~i~~~d~~g~i~~~N~~a~~l~g~~~~~~~g~~~~~~~~~~~-------~~~~~~~~~~-~~~~~~~ 168 (430)
T PRK11006 97 IKRFRSGAESLPDAVVLTTEEGNIFWCNGLAQQLLGFRWPEDNGQNILNLLRYPE-------FTQYLKTRDF-SRPLTLV 168 (430)
T ss_pred HHHHHHHHHhCCCeEEEEcCCCceeHHHHHHHHHhCCCChHhCCCcHHHHhcCHH-------HHHHHHhccc-CCCeEEE
Confidence 4678999999999999999999999999999999999999999999988765332 1222222221 1122333
Q ss_pred cCCCCEEEEEEEEEEEECCCCCEEEEEEEEEehHHHHHHHHHHHHhhccccccccCCchhHHHHhhcCCchhHHHHHH
Q 003963 209 TKTEERVLVVATNTPFYDDDGTLVGIVCVSTDSRPFQETRAALWDTKNSDTDSNINRPRNTVTAKLGLDSQQPLQATI 286 (783)
Q Consensus 209 ~kdG~~~~v~~~~~Pi~d~~G~v~g~v~i~rDITerk~~E~~L~~~~~~~~~~~~~~~~~~l~~~l~~d~~qpl~~~i 286 (783)
..+|. ++.+...|+.+ + +++.+++|||+++++++..+ .|++.++||+++||..+.
T Consensus 169 ~~~~~--~~~~~~~~~~~--~---~~~~~~~dit~~~~~e~~~~----------------~~~~~isHelrtPL~~i~ 223 (430)
T PRK11006 169 LNNGR--HLEIRVMPYTE--G---QLLMVARDVTQMHQLEGARR----------------NFFANVSHELRTPLTVLQ 223 (430)
T ss_pred cCCCC--EEEEEEEEcCC--C---cEEEEEehhhHHHHHHHHHH----------------HHHHHhHHHhcchHHHHH
Confidence 45554 44566667642 3 25678999999998876543 388889999999997643
No 477
>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional
Probab=98.77 E-value=9.2e-08 Score=101.43 Aligned_cols=134 Identities=19% Similarity=0.147 Sum_probs=93.0
Q ss_pred CcEEEEEEEEeCCceEEEEEEecccCCHHHHH----------HHHHHHHHHHhCCCCce--eeEeceeec-----CCceE
Q 003963 517 SCGTVYHAVWYGSQDVAVKVFSRQEYSDEVIH----------SFRQEVSLMKRLRHPNV--LLFMGAVTS-----PQRLC 579 (783)
Q Consensus 517 ~fG~Vy~a~~~~~~~vAiK~i~~~~~~~~~~~----------~~~~Ei~il~~l~HpnI--v~l~~~~~~-----~~~~~ 579 (783)
....|+++.. +++.|.||........ ...+ .+.+|...+..|..-+| +..+++++. ....+
T Consensus 34 ~~rrvvr~~~-~g~~~~vKr~~~~~~~-~~~k~l~~~~~p~~~a~rE~~~l~~L~~~GIptP~pVa~~e~~~~~~~~~s~ 111 (268)
T PRK15123 34 EGRRTLRFEL-AGKSYFLKWHRGTGWG-EIFKNLLSLRMPVLGADREWRAIHRLHEVGVDTMTGVAFGERGSNPATRTSF 111 (268)
T ss_pred CCceEEEEEE-CCEEEEEEEecCCcHH-HHhhhhcccccccHHHHHHHHHHHHHHHcCCCCCCeeEEEEecCCCccceeE
Confidence 3344666543 4567999976432211 1111 36788888887743222 333334432 23478
Q ss_pred EEEEecCCC-CHHHHHhhc-CCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcC-------CCcEEEEec
Q 003963 580 IVTEFLPRG-SLFRLLQRN-TTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDK-------HWTVKVGDF 650 (783)
Q Consensus 580 lV~E~~~gg-sL~~~L~~~-~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~-------~~~vkL~DF 650 (783)
+|||++++. +|.+++... ....+......++.+++..+.-||..| |+|+|+++.||||+. ++.+.|+||
T Consensus 112 LVte~l~~~~sL~~~~~~~~~~~~~~~~~~~ll~~la~~i~~LH~~G--i~HgDL~~~NiLl~~~~~~~~~~~~~~LIDl 189 (268)
T PRK15123 112 IITEDLAPTISLEDYCADWATNPPDPRLKRMLIKRVATMVRDMHAAG--INHRDCYICHFLLHLPFPGREEDLKLSVIDL 189 (268)
T ss_pred EEEeeCCCCccHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHHCc--CccCCCChhhEEEeccccCCCCCceEEEEEC
Confidence 999999876 799988532 233556677788999999999999999 999999999999975 468999999
Q ss_pred CCCc
Q 003963 651 GLSR 654 (783)
Q Consensus 651 Gla~ 654 (783)
+.+.
T Consensus 190 ~r~~ 193 (268)
T PRK15123 190 HRAQ 193 (268)
T ss_pred Cccc
Confidence 9875
No 478
>PRK11359 cyclic-di-GMP phosphodiesterase; Provisional
Probab=98.75 E-value=5.2e-08 Score=119.48 Aligned_cols=126 Identities=15% Similarity=0.224 Sum_probs=99.7
Q ss_pred CCHHHHHHHHHHhCcceEEEcCCCcEEEecHHHHHHcCCChhhHcCCCccccccccccchHHHHHHHHHHhCCe----EE
Q 003963 127 FTDRQYLNILQSMGQSVHIFDLSDRIIYWNRSAELLYGYSAEEALGQDAIELLTDGRDFDVAYDIVHRIKMGER----WT 202 (783)
Q Consensus 127 ~~~~~~~~ile~~~d~I~i~D~~G~Ii~~N~aae~L~Gys~eEllG~~~~~l~~~~~~~~~~~~l~~~l~~g~~----~~ 202 (783)
..+..+..+++..+++++++|.+|+|++||+++++++||+.+|++|+++..++++.........+......+.. +.
T Consensus 9 ~~~~~~~~~le~~~~~i~~~d~~g~i~~~N~~~~~l~G~s~eeliG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (799)
T PRK11359 9 AADGIFFPALEQNMMGAVLINENDEVLFFNPAAEKLWGYKREEVIGNNIDMLIPRDLRPAHPEYIRHNREGGKARVEGMS 88 (799)
T ss_pred hhhhhHHHHHHhhcCcEEEEcCCCeEEEEcHHHHHHhCCCHHHHcCCCHHHhcCccccccchHHHhhhhccCCccccccc
Confidence 33456778899999999999999999999999999999999999999999998876654433334444444332 34
Q ss_pred EEEEEEcCCCCEEEEEEEEEEEECCCCCEEEEEEEEEehHHHHHHHHHHHHh
Q 003963 203 GQFPAKTKTEERVLVVATNTPFYDDDGTLVGIVCVSTDSRPFQETRAALWDT 254 (783)
Q Consensus 203 ~e~~~~~kdG~~~~v~~~~~Pi~d~~G~v~g~v~i~rDITerk~~E~~L~~~ 254 (783)
.+++.+++||..+|+.+...|+. .+|.+ +++++.+|||++++++++++..
T Consensus 89 ~e~~~~~~dG~~~~v~~~~~~~~-~~g~~-~~~~~~~DiT~~~~~~~~~~~~ 138 (799)
T PRK11359 89 RELQLEKKDGSKIWTRFALSKVS-AEGKV-YYLALVRDASVEMAQKEQTRQL 138 (799)
T ss_pred eeeEEecCCcCEEEEEEEeeeec-cCCce-EEEEEEeeccchhhhHHHHHHH
Confidence 47788899999999999998874 55654 5788999999998887766543
No 479
>PRK10820 DNA-binding transcriptional regulator TyrR; Provisional
Probab=98.73 E-value=6.6e-08 Score=112.28 Aligned_cols=107 Identities=18% Similarity=0.264 Sum_probs=82.0
Q ss_pred HHHHHHHHHHhCcceEEEcCCCcEEEecHHHHHHcCCChhhHcCCCccccccccccchHHHHHHHHHHhCCeEEEEEEEE
Q 003963 129 DRQYLNILQSMGQSVHIFDLSDRIIYWNRSAELLYGYSAEEALGQDAIELLTDGRDFDVAYDIVHRIKMGERWTGQFPAK 208 (783)
Q Consensus 129 ~~~~~~ile~~~d~I~i~D~~G~Ii~~N~aae~L~Gys~eEllG~~~~~l~~~~~~~~~~~~l~~~l~~g~~~~~e~~~~ 208 (783)
...++.||+++++||+++|.+|+|+++|++|++++|++.++++|+++.++++... +.+.++.+...... ...
T Consensus 79 ~~~L~aIL~sm~eGVi~vD~~G~I~~iN~aA~~Llg~~~eel~Gk~i~eli~~~~-------l~~~le~~~~~~~~-~~v 150 (520)
T PRK10820 79 HRALSALLEALPEPVLSIDMKGKVELANPASCQLFGQSEEKLRNHTAAQLINGFN-------FLRWLESEPQDSHN-EHV 150 (520)
T ss_pred HHHHHHHHHhCCCcEEEECCCCeeeHhHHHHHHHHCcCHHHHCCCcHHHHcCcch-------HHHHHHcCCCccce-EEE
Confidence 3568999999999999999999999999999999999999999999999887533 34456666542111 122
Q ss_pred cCCCCEEEEEEEEEEEE--CCCCCE--EEEEEEEEehHHHH
Q 003963 209 TKTEERVLVVATNTPFY--DDDGTL--VGIVCVSTDSRPFQ 245 (783)
Q Consensus 209 ~kdG~~~~v~~~~~Pi~--d~~G~v--~g~v~i~rDITerk 245 (783)
..+|..++ +...||. |++|.. .|+|.+++|+++..
T Consensus 151 ~~~g~~~~--v~~~PI~~~d~~g~~~~~GaVivlrd~~~l~ 189 (520)
T PRK10820 151 VINGQDFL--MEITPVYLQDENDQHVLVGAVVMLRSTARMG 189 (520)
T ss_pred EECCEEEE--EEEEeeeecCCCCceeEEEEEEEeccHHHHH
Confidence 34576555 4556776 666654 89999999998754
No 480
>TIGR02040 PpsR-CrtJ transcriptional regulator PpsR. This model represents the transcriptional regulator PpsR which is strictly associated with photosynthetic proteobacteria and found in photosynthetic operons. PpsR has been reported to be a repressor. These proteins contain a Helix-Turn_Helix motif of the "fis" type (pfam02954).
Probab=98.72 E-value=1.3e-08 Score=116.35 Aligned_cols=113 Identities=11% Similarity=0.036 Sum_probs=88.0
Q ss_pred HHHhCcceEEEcCCCcEEEecHHHHHHcCCChhhHcCCCccccccccccchHHHHHHHHHHhCC-eEEEEEEEEcCCCCE
Q 003963 136 LQSMGQSVHIFDLSDRIIYWNRSAELLYGYSAEEALGQDAIELLTDGRDFDVAYDIVHRIKMGE-RWTGQFPAKTKTEER 214 (783)
Q Consensus 136 le~~~d~I~i~D~~G~Ii~~N~aae~L~Gys~eEllG~~~~~l~~~~~~~~~~~~l~~~l~~g~-~~~~e~~~~~kdG~~ 214 (783)
++.++|+|+++|.+|+|++||.++++++||+.+|++|+++.++++++........+...+..+. .+..+.....++|..
T Consensus 2 ~~~~~d~~~~~d~~g~i~~~n~~~~~~~g~~~~el~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~g~~ 81 (442)
T TIGR02040 2 LATAADVTLLLDAEGVVREVAANPHHPSFEQLSEWEGRRWEEIVTAESVEKFELRLSEALRTGRGAVRVELNHIDPSSFE 81 (442)
T ss_pred CcccCcEEEEECCCCcEEEEEECCCcccccccccCCCCcHhHhhCcchHHHHHHHHHHHhccCCCcceEeeccCCCCCCc
Confidence 5678999999999999999999999999999999999999999987764444344445556554 344455555667778
Q ss_pred EEEEEEEEEEECCCCCEEEEEEEEEehHHHHHHHHHHH
Q 003963 215 VLVVATNTPFYDDDGTLVGIVCVSTDSRPFQETRAALW 252 (783)
Q Consensus 215 ~~v~~~~~Pi~d~~G~v~g~v~i~rDITerk~~E~~L~ 252 (783)
+|+.++..++.+ + .+++++.+|||++++.+++|.
T Consensus 82 ~~~~~~~~~~~~--~--~~~~~i~rDi~~~~~~~~~l~ 115 (442)
T TIGR02040 82 LPMRFILVRLGA--D--RGVLALGRDLRAVAELQQQLV 115 (442)
T ss_pred cCeEEEEEEeCC--C--CeEEEEecccHHHHHHHHHHH
Confidence 888888777654 2 256789999999998877763
No 481
>PF12860 PAS_7: PAS fold
Probab=98.69 E-value=5.2e-08 Score=89.69 Aligned_cols=105 Identities=24% Similarity=0.354 Sum_probs=75.0
Q ss_pred HHHhCcceEEEcCCCcEEEecHHHHHHcCCChhhH-cCCCcccccccc------ccchHHHHHHHH---HHhCCeEEEEE
Q 003963 136 LQSMGQSVHIFDLSDRIIYWNRSAELLYGYSAEEA-LGQDAIELLTDG------RDFDVAYDIVHR---IKMGERWTGQF 205 (783)
Q Consensus 136 le~~~d~I~i~D~~G~Ii~~N~aae~L~Gys~eEl-lG~~~~~l~~~~------~~~~~~~~l~~~---l~~g~~~~~e~ 205 (783)
|+++++||+++|.+|++++||++|.+|+|++.+.+ .|.++.+++... ........+.+. ........ +
T Consensus 1 Ld~l~~Gv~v~D~~~rl~~~N~~~~~l~~~~~~~~~~G~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~--~ 78 (115)
T PF12860_consen 1 LDSLPQGVAVFDSDGRLVFWNQRFRELFGLPPEMLRPGASFRDLLRRLAERGEFPPGDPEAWVRQRLARLRRRQPRS--F 78 (115)
T ss_pred CCCcCceEEEEcCCCeEEeEcHHHHHHhCCCHHHhcCCCCHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHhcCCCce--e
Confidence 47899999999999999999999999999999998 799888765311 111112222222 33333322 3
Q ss_pred EEEcCCCCEEEEEEEEEEEECCCCCEEEEEEEEEehHHHHHHHH
Q 003963 206 PAKTKTEERVLVVATNTPFYDDDGTLVGIVCVSTDSRPFQETRA 249 (783)
Q Consensus 206 ~~~~kdG~~~~v~~~~~Pi~d~~G~v~g~v~i~rDITerk~~E~ 249 (783)
.....|| .|+.++..|+- +| |+|.++.|||+++++|+
T Consensus 79 ~~~~~dg--r~l~~~~~~~~--~G---g~v~~~~DVT~~~~~E~ 115 (115)
T PF12860_consen 79 ELRLPDG--RWLEVRAQPLP--DG---GFVLTFTDVTERRRAEE 115 (115)
T ss_pred EEECCCC--EEEEEEeEECC--CC---CEEEEEEeCCHHHHhcC
Confidence 3456777 46678888874 45 58899999999998874
No 482
>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]
Probab=98.66 E-value=1.3e-07 Score=97.83 Aligned_cols=136 Identities=26% Similarity=0.246 Sum_probs=98.1
Q ss_pred eeEeeeeccCCcEEEEEEEEeCCceEEEEEEeccc------------------CC--HHHHHHHHHHHHHHHhCCCC--c
Q 003963 507 LTIGEQIGQGSCGTVYHAVWYGSQDVAVKVFSRQE------------------YS--DEVIHSFRQEVSLMKRLRHP--N 564 (783)
Q Consensus 507 y~i~~~LG~G~fG~Vy~a~~~~~~~vAiK~i~~~~------------------~~--~~~~~~~~~Ei~il~~l~Hp--n 564 (783)
+.++.+||-|.-+.||.|.+..+.++|||.-+... .+ .-......+|.++|..|... .
T Consensus 93 e~iG~~IGvGKEsdVY~~~~~~g~~~~vKfHR~GrtsFrkvk~~R~y~~~~~h~sWl~~sRl~A~rEf~~L~~L~~~G~~ 172 (304)
T COG0478 93 EAIGTKIGVGKESDVYVAIDPKGRKVAVKFHRLGRTSFRKVKRNRDYLADKEHGSWLYVSRLAAEREFEALQRLYPEGVK 172 (304)
T ss_pred HhhccccccCccceEEEEECCCCCEEEEEEeecCchhhhhhcchhhhhccccCcchhhhHHHHHHHHHHHHHHhhhcCCC
Confidence 45778999999999999999888899999753221 11 12234577899999999754 6
Q ss_pred eeeEeceeecCCceEEEEEecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCc
Q 003963 565 VLLFMGAVTSPQRLCIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWT 644 (783)
Q Consensus 565 Iv~l~~~~~~~~~~~lV~E~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~ 644 (783)
|++.+++ +...+||||++|-.|+..- +.....-.++..|+.-+.-+-..| |||+|+.+-||||+++|.
T Consensus 173 VP~P~~~----nRHaVvMe~ieG~eL~~~r------~~~en~~~il~~il~~~~~~~~~G--iVHGDlSefNIlV~~dg~ 240 (304)
T COG0478 173 VPKPIAW----NRHAVVMEYIEGVELYRLR------LDVENPDEILDKILEEVRKAYRRG--IVHGDLSEFNILVTEDGD 240 (304)
T ss_pred CCCcccc----ccceeeeehcccceeeccc------CcccCHHHHHHHHHHHHHHHHHcC--ccccCCchheEEEecCCC
Confidence 7777653 5678999999987776542 122223333444444444444667 999999999999999999
Q ss_pred EEEEecCCCc
Q 003963 645 VKVGDFGLSR 654 (783)
Q Consensus 645 vkL~DFGla~ 654 (783)
+.++||--+.
T Consensus 241 ~~vIDwPQ~v 250 (304)
T COG0478 241 IVVIDWPQAV 250 (304)
T ss_pred EEEEeCcccc
Confidence 9999997553
No 483
>PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane
Probab=98.54 E-value=4.9e-07 Score=92.39 Aligned_cols=105 Identities=30% Similarity=0.308 Sum_probs=80.8
Q ss_pred HHHHHHHHHHHhCCCCc--eeeEeceeecC----CceEEEEEecCCC-CHHHHHhhcCCcchHHHHHHHHHHHHHHHHHH
Q 003963 548 HSFRQEVSLMKRLRHPN--VLLFMGAVTSP----QRLCIVTEFLPRG-SLFRLLQRNTTKLDWRRRILMALDIARGVSYL 620 (783)
Q Consensus 548 ~~~~~Ei~il~~l~Hpn--Iv~l~~~~~~~----~~~~lV~E~~~gg-sL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~L 620 (783)
.+..+|...+..|..-. +++.+++.+.. ...++|+|++++. +|.+++..... .+......++.+++..+.-|
T Consensus 56 ~ra~~E~~~~~~L~~~Gi~tP~pva~~~~r~~~~~~s~lite~l~~~~~L~~~~~~~~~-~~~~~~~~ll~~l~~~i~~l 134 (206)
T PF06293_consen 56 SRAKREWRNLQRLREAGIPTPEPVAYGERRKGGGYRSYLITEALPGAQDLRDLLQQWEQ-LDPSQRRELLRALARLIAKL 134 (206)
T ss_pred hHHHHHHHHHHHHHHcCCCCCcEEEEEEEcCCCceeEEEEEEeCCCcccHHHHHHhhcc-cchhhHHHHHHHHHHHHHHH
Confidence 35677888777774322 34455554432 2358999999874 79999876332 56667788899999999999
Q ss_pred HhCCCCEEecCCCCCCEEEcCCC---cEEEEecCCCcc
Q 003963 621 HHCNPPIIHRDLKSSNLLVDKHW---TVKVGDFGLSRL 655 (783)
Q Consensus 621 H~~~~~IvHrDIKp~NILl~~~~---~vkL~DFGla~~ 655 (783)
|..| |+|+|+++.||||+.++ .+.|+||+.++.
T Consensus 135 H~~g--i~H~Dl~~~NILv~~~~~~~~~~lIDld~~~~ 170 (206)
T PF06293_consen 135 HDAG--IYHGDLNPSNILVDPDDGQYRFYLIDLDRMRF 170 (206)
T ss_pred HHCc--CCCCCCCcccEEEeCCCCceeEEEEcchhcee
Confidence 9999 99999999999999887 899999997764
No 484
>TIGR02938 nifL_nitrog nitrogen fixation negative regulator NifL. NifL is a modulator of the nitrogen fixation positive regulator protein NifA, and is therefore a negative regulator. It binds NifA. NifA and NifL are encoded by adjacent genes.
Probab=98.52 E-value=8.6e-08 Score=109.93 Aligned_cols=153 Identities=8% Similarity=0.032 Sum_probs=101.1
Q ss_pred HHHHHHHHHHhCcceEEEcCCCcEEEecHHHHHHcCCChhhHcCCCccccccccccchHHHHHHHHHHhCCeEE-EEEEE
Q 003963 129 DRQYLNILQSMGQSVHIFDLSDRIIYWNRSAELLYGYSAEEALGQDAIELLTDGRDFDVAYDIVHRIKMGERWT-GQFPA 207 (783)
Q Consensus 129 ~~~~~~ile~~~d~I~i~D~~G~Ii~~N~aae~L~Gys~eEllG~~~~~l~~~~~~~~~~~~l~~~l~~g~~~~-~e~~~ 207 (783)
...++.++++++++|+++|.+|+|+++|+++++++|+...+..+..+..++.+.... .+......+..+. .+...
T Consensus 129 ~~~~~~~~~~~~~~i~~~d~~~~i~~~N~~~~~~~g~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~ 204 (494)
T TIGR02938 129 KLLIESVVDAAPVAFVLLDPTGRVILDNQEYKKLATDLRVKEPAHTVLDLLREAWRE----ALAENWPQQLAFSNREARF 204 (494)
T ss_pred HHHHHHHHhcccceEEEEcCCCCEEEechhHHHhhchhhhhHHHHHHHHHhhHHhhh----hhhhcchhhhccccceeee
Confidence 356789999999999999999999999999999999998888777665554433221 1111111222222 23334
Q ss_pred EcCCCC-EEEEEEEEEEEECCCCCE---------EEEEEEEEehHHHHHHHHHHHHhhccc---cccccCCchhHHHHhh
Q 003963 208 KTKTEE-RVLVVATNTPFYDDDGTL---------VGIVCVSTDSRPFQETRAALWDTKNSD---TDSNINRPRNTVTAKL 274 (783)
Q Consensus 208 ~~kdG~-~~~v~~~~~Pi~d~~G~v---------~g~v~i~rDITerk~~E~~L~~~~~~~---~~~~~~~~~~~l~~~l 274 (783)
...+|. .+|+.....++.+.+|.+ .+++++++|||++|+.|++++.....+ .........+ ++...
T Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~DITe~k~~ee~l~~~al~~~~~~~~~~~~l~~-~~~~~ 283 (494)
T TIGR02938 205 DRGGGRPARWLSCTGSVIGMESDCADSFFCAAEQPYLLLTIADISNLREEQERARLSALQALMAEEERLEAIRE-TLSAA 283 (494)
T ss_pred ccCCCceeeEEEecCceEEeecchhhheeccCCCchheehHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHH
Confidence 445555 789998888887666543 345678999999999998875432221 1111222223 45556
Q ss_pred cCCchhHHHHHH
Q 003963 275 GLDSQQPLQATI 286 (783)
Q Consensus 275 ~~d~~qpl~~~i 286 (783)
.|++++||+.+.
T Consensus 284 ~h~lr~pL~~i~ 295 (494)
T TIGR02938 284 IHRLQGPMNLIS 295 (494)
T ss_pred HHHHhcHHHHHH
Confidence 699999997643
No 485
>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]
Probab=98.48 E-value=2.1e-08 Score=113.03 Aligned_cols=238 Identities=19% Similarity=0.203 Sum_probs=162.2
Q ss_pred eEeeeeccCCcEEEEEEEEeCCceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCc-eeeEeceeecCCceEEEEEecC
Q 003963 508 TIGEQIGQGSCGTVYHAVWYGSQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPN-VLLFMGAVTSPQRLCIVTEFLP 586 (783)
Q Consensus 508 ~i~~~LG~G~fG~Vy~a~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~Hpn-Iv~l~~~~~~~~~~~lV~E~~~ 586 (783)
...+-+++|++++++|.+....+....+++... ....-++++|.+++||| .+..++-++.+.+.+++|+++.
T Consensus 245 ~~fh~fvK~altknpKkRptaeklL~h~fvs~~-------l~~rl~~eLLdK~n~P~~~v~~~~d~~~E~~~~i~~~i~s 317 (829)
T KOG0576|consen 245 EFFHNFVKGALTKNPKKRPTAEKLLQHPFVSQT-------LSRRLAIELLDKVNNPNPVVRYLEDYDGEDYLWIPMRICS 317 (829)
T ss_pred HHHHHHHHHHhcCCCccCCChhhheeceeeccc-------hhhHHHHHHHHHccCCCCcccccccCCcccccchhhhhhc
Confidence 344567899999999987655545556665443 23445899999999999 7777888888889999999998
Q ss_pred CC-CHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCcccccccccccC
Q 003963 587 RG-SLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETYLTTKT 665 (783)
Q Consensus 587 gg-sL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~~~~~~ 665 (783)
++ +...........+..-....+.+.-++++++||+.- =+|+| ||+..+ +.+++.||+....+.... ...+
T Consensus 318 ~~rs~~~~~~~se~~~~~~~~~~~~r~et~~l~~l~~~~--~~~~d----~~l~s~-~~~~~~~~~v~~~L~~~~-~~~t 389 (829)
T KOG0576|consen 318 TGRSSALEMTVSEIALEQYQFAYPLRKETRPLAELHSSY--KVHRD----NILGSE-EEVKLLDFAVPPQLTRTM-KPRT 389 (829)
T ss_pred CCccccccCChhhHhhhhhhhhhhhhhhccccccccccc--ccCcc----cccccc-cccccccccCCcccCccc-cccc
Confidence 77 222222211222444455566677788999999863 38888 777766 589999999887665554 4456
Q ss_pred CCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhcccccccCC--CCCCHHHH-HHHHHh
Q 003963 666 GKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLEIP--KDVDPRWA-AIVESC 742 (783)
Q Consensus 666 ~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~~--~~~s~~l~-~LI~~c 742 (783)
..+++.+++||+.....+....|.|+++.--.+|.-|.+|-... ......+......+.+. ..+++... ++...|
T Consensus 390 ~~~~~~~~~pev~~~~~~~~~p~~~~~~~~~~~~ap~~pPr~~P--~~~~~~~g~~p~s~~L~~~~aw~~~~~~~~~~~~ 467 (829)
T KOG0576|consen 390 AIGTPEPLAPEVIQENTIDGCPDSGSLAVSAIQMAPGLPPRSSP--PAVLPMIGNGPNSPMLTDKSAWSPVFHRDFPAPC 467 (829)
T ss_pred CCCCCCCCCchhhcccccccCCCccCCCcchhhcCCCCCCCCCC--ccccCCCCCCCCccccchhhhcCcccccCCcccc
Confidence 67899999999999999999999999998877888887775431 11111111000001111 11222222 367788
Q ss_pred hhhCCCCCCCHHHHHHHHHHHHHHHh
Q 003963 743 WHSDPQCRPSFQELVDKLRDLQRQYF 768 (783)
Q Consensus 743 L~~dP~~RPsa~ell~~L~~L~~~~f 768 (783)
+...|..++..... +.+++|
T Consensus 468 ~~g~P~~pkv~mga------cfsKvf 487 (829)
T KOG0576|consen 468 LNGLPPTPKVHMGA------CFSKVF 487 (829)
T ss_pred cCCCCCCCcchhhH------HHHHHh
Confidence 88888888887776 667777
No 486
>COG3290 CitA Signal transduction histidine kinase regulating citrate/malate metabolism [Signal transduction mechanisms]
Probab=98.44 E-value=9.2e-07 Score=99.02 Aligned_cols=114 Identities=21% Similarity=0.314 Sum_probs=94.8
Q ss_pred HHHHHHHhCcceEEEcCCCcEEEecHHHHHHcCCChh--hHcCCCccccccccccchHHHHHHHHHHhCCeEEEEEEEEc
Q 003963 132 YLNILQSMGQSVHIFDLSDRIIYWNRSAELLYGYSAE--EALGQDAIELLTDGRDFDVAYDIVHRIKMGERWTGQFPAKT 209 (783)
Q Consensus 132 ~~~ile~~~d~I~i~D~~G~Ii~~N~aae~L~Gys~e--EllG~~~~~l~~~~~~~~~~~~l~~~l~~g~~~~~e~~~~~ 209 (783)
-.++|+++.+||+.+|+.|.|..+|.+|++|+|+... +.+|+++.++++|+.+ +..+++.+++...+...+
T Consensus 217 r~A~l~si~EGviAvd~~G~It~~N~~A~~ll~~~~~~~~~ig~~i~~v~~p~~~------l~~vl~~~~~~~~~e~~~- 289 (537)
T COG3290 217 RQAMLQSIKEGVIAVDKKGVITLINQAAQKLLGLRQPSGDPIGRSIVEVLPPDSD------LPEVLETGKPQHDEEIRI- 289 (537)
T ss_pred HHHHHHHhhceEEEECCCCeEeehhHHHHHHhcccCcCcccccccceEeeccccC------cHHHHhcCCcccchhhhc-
Confidence 3567999999999999999999999999999999765 7999999999988554 566788888766554433
Q ss_pred CCCCEEEEEEEEEEEECCCCCEEEEEEEEEehHHHHHHHHHHHHhhc
Q 003963 210 KTEERVLVVATNTPFYDDDGTLVGIVCVSTDSRPFQETRAALWDTKN 256 (783)
Q Consensus 210 kdG~~~~v~~~~~Pi~d~~G~v~g~v~i~rDITerk~~E~~L~~~~~ 256 (783)
+| .++.++..||. .+|+++|+|..|||-||.+++-++|...++
T Consensus 290 -ng--~~~i~nr~pI~-~~~~~~GaI~tFRdktei~~L~eqLt~vr~ 332 (537)
T COG3290 290 -NG--RLLVANRVPIR-SGGQIVGAIITFRDKTEIKKLTEQLTGVRQ 332 (537)
T ss_pred -CC--eEEEEEeccEE-ECCEEeEEEEEEecHHHHHHHHHHHHHHHH
Confidence 33 46677888997 578999999999999999999999976555
No 487
>COG3852 NtrB Signal transduction histidine kinase, nitrogen specific [Signal transduction mechanisms]
Probab=98.42 E-value=2.8e-06 Score=88.37 Aligned_cols=139 Identities=19% Similarity=0.146 Sum_probs=106.0
Q ss_pred HHHHHHHhCcceEEEcCCCcEEEecHHHHHHcCCChhhHcCCCccccccccccchHHHHHHHHHHhCCeEEE-EEEEEcC
Q 003963 132 YLNILQSMGQSVHIFDLSDRIIYWNRSAELLYGYSAEEALGQDAIELLTDGRDFDVAYDIVHRIKMGERWTG-QFPAKTK 210 (783)
Q Consensus 132 ~~~ile~~~d~I~i~D~~G~Ii~~N~aae~L~Gys~eEllG~~~~~l~~~~~~~~~~~~l~~~l~~g~~~~~-e~~~~~k 210 (783)
-..+|+++..+|+++|.+|.|.|+|++|+.+||.+..-+.|..+..|++.... ...-+.++...+.+... ++.+. .
T Consensus 9 ~~~~Ln~~~~pVl~vd~~~~i~yaN~aAe~~~~~Sa~~L~~~~l~~l~~~gs~--ll~ll~q~~~~~~~~~~~~v~l~-~ 85 (363)
T COG3852 9 AGAILNNLINPVLLVDDELAIHYANPAAEQLLAVSARRLAGTRLSELLPFGSL--LLSLLDQVLERGQPVTEYEVTLV-I 85 (363)
T ss_pred cHhHHhccCCceEEEcCCCcEEecCHHHHHHHHHHHHHHhcCChHHHcCCCcH--HHHHHHHHHHhcCCcccceeeee-e
Confidence 35789999999999999999999999999999999999999999999987754 23345667777776433 33333 7
Q ss_pred CCCEEEEEEEEEEEECCCCCEEEEEEEEEehHHHHHHHHHHHHhhccccccccCCchhHHHHhhcCCchhHHH
Q 003963 211 TEERVLVVATNTPFYDDDGTLVGIVCVSTDSRPFQETRAALWDTKNSDTDSNINRPRNTVTAKLGLDSQQPLQ 283 (783)
Q Consensus 211 dG~~~~v~~~~~Pi~d~~G~v~g~v~i~rDITerk~~E~~L~~~~~~~~~~~~~~~~~~l~~~l~~d~~qpl~ 283 (783)
+|....+++++.|+-...|- ++..++.+....++.+++.+... .+...++...++|+++.||-
T Consensus 86 ~g~~~~v~~~v~~v~~~~G~---vlle~~~~~~~~ridre~~q~a~-------~~a~~~L~r~LAHEIKNPL~ 148 (363)
T COG3852 86 LGRSHIVDLTVAPVPEEPGS---VLLEFHPRDMQRRLDREQTQHAQ-------QRAVKGLVRGLAHEIKNPLG 148 (363)
T ss_pred cCccceEEEEEeeccCCCCe---EEEEechhHHHhHhhHHHHHHHH-------HHHHHHHHHHHHHHhcCccc
Confidence 89999999999999766664 56677777777766666443222 12345688888888887774
No 488
>TIGR02172 Fb_sc_TIGR02172 Fibrobacter succinogenes paralogous family TIGR02172. This model describes a paralogous family of five proteins, likely to be enzymes, in the rumen bacterium Fibrobacter succinogenes S85. Members show homology to proteins described by PFAM model pfam01636, a phosphotransferase enzyme family associated with resistance to aminoglycoside antibiotics. However, members of this family score below the current trusted and noise cutoffs for pfam01636.
Probab=98.34 E-value=5.4e-06 Score=85.96 Aligned_cols=136 Identities=15% Similarity=0.216 Sum_probs=83.7
Q ss_pred eeeccCCcEEEEEEEEeCCceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCc--eeeEeceeecCCceEEEEEecCCC
Q 003963 511 EQIGQGSCGTVYHAVWYGSQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPN--VLLFMGAVTSPQRLCIVTEFLPRG 588 (783)
Q Consensus 511 ~~LG~G~fG~Vy~a~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~Hpn--Iv~l~~~~~~~~~~~lV~E~~~gg 588 (783)
.+||+|..+.||+. .+..+++|+..... .. ....+|.++++.+..-. +.+.+.+....+..++|||+++|.
T Consensus 7 ~~i~~G~t~~~y~~---~~~~~VlR~~~~~~-~~---~~i~~E~~~l~~l~~~glpvP~~~~~~~~~~~~glv~e~i~G~ 79 (226)
T TIGR02172 7 TQTGEGGNGESYTH---KTGKWMLKLYNPGF-DK---ETIKREFDASRKVFSLGIPTPHPFDLVEDGGRLGLIYELIVGK 79 (226)
T ss_pred eeecCCCCcceeEe---cCCCEEEEeCCCCC-CH---HHHHHHHHHHHHHHHcCCCCCceEEEEecCCeeeeeeeecCCc
Confidence 57899999999984 24468889876533 22 34578999998886433 467777777777789999999885
Q ss_pred C-HHHHHh--------------h-----cCC---cchHHHHH-HHHH----------HHHHH-HHHHH--hCCCCEEecC
Q 003963 589 S-LFRLLQ--------------R-----NTT---KLDWRRRI-LMAL----------DIARG-VSYLH--HCNPPIIHRD 631 (783)
Q Consensus 589 s-L~~~L~--------------~-----~~~---~l~~~~~~-~i~~----------qi~~a-L~~LH--~~~~~IvHrD 631 (783)
. +...+. . +.. ........ .+.. .+... ..+|. .....++|+|
T Consensus 80 ~~~~~~~~~~~~~~~~l~~~la~~l~~lH~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~HgD 159 (226)
T TIGR02172 80 RSFSRIISDNPSRLEEIAKIFAEMAKKLHSTKCDTSTFQSYKEKIRKFIEEKDFVPKDYKEKARAFIKEVPDTSTCLHGD 159 (226)
T ss_pred cchhhhhcCCHHHHHHHHHHHHHHHHHHhCCCCCCCcHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHhCCCCCceEecC
Confidence 3 211110 0 000 00111000 0000 01111 12222 1223488999
Q ss_pred CCCCCEEEcCCCcEEEEecCCCc
Q 003963 632 LKSSNLLVDKHWTVKVGDFGLSR 654 (783)
Q Consensus 632 IKp~NILl~~~~~vkL~DFGla~ 654 (783)
+.|.||++++++ +.|+||+.+.
T Consensus 160 ~~~~Nii~~~~~-~~iIDwe~a~ 181 (226)
T TIGR02172 160 FQIGNLITSGKG-TYWIDLGDFG 181 (226)
T ss_pred CCCCcEEEcCCC-cEEEechhcC
Confidence 999999999887 9999999875
No 489
>PRK09902 hypothetical protein; Provisional
Probab=98.32 E-value=4.7e-06 Score=84.42 Aligned_cols=138 Identities=18% Similarity=0.106 Sum_probs=98.7
Q ss_pred ccCCcEEEEEEEEeCCceEEEEEEecccC-C---HHHHHHHHHHHHHHHhCCCCc--eeeEeceee---cC--CceEEEE
Q 003963 514 GQGSCGTVYHAVWYGSQDVAVKVFSRQEY-S---DEVIHSFRQEVSLMKRLRHPN--VLLFMGAVT---SP--QRLCIVT 582 (783)
Q Consensus 514 G~G~fG~Vy~a~~~~~~~vAiK~i~~~~~-~---~~~~~~~~~Ei~il~~l~Hpn--Iv~l~~~~~---~~--~~~~lV~ 582 (783)
|+||.+-|+.....+. .+-+|.-..... + +.-...|.+|+..|+.|..-+ +++.. ++. .+ -..+||+
T Consensus 27 ~rgG~SgV~r~~~~g~-~~ylKrq~nhl~~s~r~P~g~ptf~rE~~~L~~L~~~GvPVP~pv-f~~~~k~~~~~rA~LVT 104 (216)
T PRK09902 27 RRNGMSGVQCVERNGK-KLYVKRMTHHLFHSVRYPFGRPTIVREVAVIKELERAGVIVPKIV-FGEAVKIEGEWRALLVT 104 (216)
T ss_pred CCCCcceEEEEEeCCc-EEEEEeccCcccccccCCCCchHHHHHHHHHHHHHHcCCCCCccc-eeeeeccCCceEEEEEE
Confidence 6799999999765544 688887531110 0 112467889999999885322 34444 222 12 2368999
Q ss_pred EecCC-CCHHHHHhhcC-CcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCc--EEEEecCCCcc
Q 003963 583 EFLPR-GSLFRLLQRNT-TKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWT--VKVGDFGLSRL 655 (783)
Q Consensus 583 E~~~g-gsL~~~L~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~--vkL~DFGla~~ 655 (783)
|-++| -+|.+++.... .+.+......++.+++..+.-||+.| +.|+|+.+.|||++.++. |+++||.-++.
T Consensus 105 e~L~g~~~L~~~l~~~~~~~~~~~~k~~il~~va~~ia~LH~~G--v~Hgdly~khIll~~~g~~~v~lIDlEk~r~ 179 (216)
T PRK09902 105 EDMAGFISIADWYAQHAVSPYSDEVRQAMLKAVALAFKKMHSVN--RQHGCCYVRHIYVKTEGKAEAGFLDLEKSRR 179 (216)
T ss_pred EeCCCCccHHHHHhcCCcCCcchHHHHHHHHHHHHHHHHHHHCC--CcCCCCCHhheeecCCCCeeEEEEEhhccch
Confidence 98853 48988886532 24567777788999999999999999 999999999999986667 99999986653
No 490
>KOG0501 consensus K+-channel KCNQ [Inorganic ion transport and metabolism]
Probab=98.30 E-value=3.2e-06 Score=93.44 Aligned_cols=118 Identities=14% Similarity=0.199 Sum_probs=98.4
Q ss_pred HHHHHHHHHHhC--cceEEE-cC---CCcEEEecHHHHHHcCCChhhHcCCCccc--cccccccchHHHHHHHHHHhCCe
Q 003963 129 DRQYLNILQSMG--QSVHIF-DL---SDRIIYWNRSAELLYGYSAEEALGQDAIE--LLTDGRDFDVAYDIVHRIKMGER 200 (783)
Q Consensus 129 ~~~~~~ile~~~--d~I~i~-D~---~G~Ii~~N~aae~L~Gys~eEllG~~~~~--l~~~~~~~~~~~~l~~~l~~g~~ 200 (783)
+-+++.|+.... |.-+++ +. |..|+|+|..||+|.||.+.|++.++|.- +++...+......+.+.++.-+.
T Consensus 13 NTFLENiiRRsn~~dtsFlL~NAQiVD~PiVY~NdgFcKlsGY~RAevMQKs~tc~FMyGEltdk~ti~k~~~t~eN~~~ 92 (971)
T KOG0501|consen 13 NTFLENIIRRSNNADTSFLLANAQIVDWPIVYCNDGFCKLSGYHRAEVMQKSCTCSFMYGELTDKGTIEKVRQTLENYET 92 (971)
T ss_pred hhHHHHHHhhccCCCcceeeccceeeccceEEecCcchhccCccHHHHhcccceeeeeeccccchhhHHHHHHHHHhhhh
Confidence 356777776554 554543 33 68999999999999999999999988754 44455556677788888988888
Q ss_pred EEEEEEEEcCCCCEEEEEEEEEEEECCCCCEEEEEEEEEehHHHHH
Q 003963 201 WTGQFPAKTKTEERVLVVATNTPFYDDDGTLVGIVCVSTDSRPFQE 246 (783)
Q Consensus 201 ~~~e~~~~~kdG~~~~v~~~~~Pi~d~~G~v~g~v~i~rDITerk~ 246 (783)
-..++.++.|+...+|+.+.+.||+++.+.++-+++.|+|||..|+
T Consensus 93 ~qfEillyKKN~TPvW~~vqiAPIrNe~d~VVLfLctFkDIT~~KQ 138 (971)
T KOG0501|consen 93 NQFEILLYKKNRTPVWLLVQIAPIRNEKDKVVLFLCTFKDITALKQ 138 (971)
T ss_pred cceeeEeeecCCCceEEEEEeecccCCCceEEEEEeecccchhhcC
Confidence 8889999999999999999999999999999999999999999875
No 491
>COG0661 AarF Predicted unusual protein kinase [General function prediction only]
Probab=98.28 E-value=2.4e-06 Score=98.04 Aligned_cols=151 Identities=21% Similarity=0.260 Sum_probs=95.5
Q ss_pred cccceeEeeeeccCCcEEEEEEEEeCCceEEEEEEeccc---------------------------CC-----HHHHHH-
Q 003963 503 LWEDLTIGEQIGQGSCGTVYHAVWYGSQDVAVKVFSRQE---------------------------YS-----DEVIHS- 549 (783)
Q Consensus 503 ~~~~y~i~~~LG~G~fG~Vy~a~~~~~~~vAiK~i~~~~---------------------------~~-----~~~~~~- 549 (783)
.+..|.- +.|+.++-|.||+|+.++++.||||+.+..- .+ ++..+.
T Consensus 124 ~F~eF~~-~PiAsASIaQVH~A~L~sG~~VAVKVqrPgi~~~i~~DL~il~~~a~~~~~~~~~~~~l~~~~vv~e~~~~l 202 (517)
T COG0661 124 LFSEFEP-EPIASASIAQVHRAVLKSGEEVAVKVQRPGIRERIEADLKLLRRLARLIKRLPPGGRRLDLVEVVDEFEKRL 202 (517)
T ss_pred HHHHcCC-CchhhhhHhhheeEEecCCCEEEEEecCCChHHHHHHHHHHHHHHHHHHHHcCCccccCChHHHHHHHHHHH
Confidence 3344442 6899999999999999999999999975321 11 111122
Q ss_pred -----HHHHHHHHHhCC-----CCceeeEeceeecCCceEEEEEecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHH
Q 003963 550 -----FRQEVSLMKRLR-----HPNVLLFMGAVTSPQRLCIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSY 619 (783)
Q Consensus 550 -----~~~Ei~il~~l~-----HpnIv~l~~~~~~~~~~~lV~E~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~ 619 (783)
+.+|...+.+++ .++|.-..-|++.-..-+|+|||++|..+.+...-....++...+.....++. +..
T Consensus 203 ~~ElDy~~EA~n~~~~~~nf~~~~~v~VP~V~we~t~~~VLtmE~i~Gi~i~d~~~l~~~g~d~k~ia~~~~~~f--~~q 280 (517)
T COG0661 203 REELDYRREAANAERFRENFKDDPDVYVPKVYWEYTTRRVLTMEWIDGIKISDIAALKSAGIDRKELAELLVRAF--LRQ 280 (517)
T ss_pred HHHhCHHHHHHHHHHHHHHcCCCCCeEeceeehhccCCcEEEEEeeCCEecccHHHHHhcCCCHHHHHHHHHHHH--HHH
Confidence 233444444442 34443323333444567899999999988887432223344333333222222 222
Q ss_pred HHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCccccc
Q 003963 620 LHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHE 658 (783)
Q Consensus 620 LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~~ 658 (783)
+-..| ++|.|..|.||+++.+|++.+.|||+......
T Consensus 281 ~~~dg--ffHaDpHpGNi~v~~~g~i~~lDfGi~g~l~~ 317 (517)
T COG0661 281 LLRDG--FFHADPHPGNILVRSDGRIVLLDFGIVGRLDP 317 (517)
T ss_pred HHhcC--ccccCCCccceEEecCCcEEEEcCcceecCCH
Confidence 33356 99999999999999999999999999865443
No 492
>PF01636 APH: Phosphotransferase enzyme family This family is part of the larger protein kinase superfamily.; InterPro: IPR002575 This entry consists of bacterial antibiotic resistance proteins, which confer resistance to various aminoglycosides they include:- aminoglycoside 3'-phosphotransferase or kanamycin kinase / neomycin-kanamycin phosphotransferase and streptomycin 3''-kinase or streptomycin 3''-phosphotransferase. The aminoglycoside phosphotransferases inactivate aminoglycoside antibiotics via phosphorylation []. The proteins are found in a range of taxonomic groups.; PDB: 2PPQ_A 2Q83_B 3TDV_B 3TDW_A 3I0O_A 3I0Q_A 3I1A_B 3Q2M_A 3HAV_C 2PUI_B ....
Probab=98.26 E-value=7.8e-06 Score=84.01 Aligned_cols=141 Identities=18% Similarity=0.213 Sum_probs=82.8
Q ss_pred eeeeccCCcEEEEEEEEeCCceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCC--ceeeEeceee---cCCceEEEEEe
Q 003963 510 GEQIGQGSCGTVYHAVWYGSQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHP--NVLLFMGAVT---SPQRLCIVTEF 584 (783)
Q Consensus 510 ~~~LG~G~fG~Vy~a~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~Hp--nIv~l~~~~~---~~~~~~lV~E~ 584 (783)
++.|+.|..+.||++...+ +.+++|+.... .....+.+|..+++.|... .+.+++.+.. .....+++|++
T Consensus 2 i~~l~~G~~n~~~~v~~~~-~~~vlK~~~~~----~~~~~~~~e~~~~~~l~~~~~pvP~~~~~~~~~~~~~~~~~~~~~ 76 (239)
T PF01636_consen 2 IRPLSGGFSNRVYRVTTDD-GRYVLKFYRPP----DAAERLRREAAVLRQLAEHGIPVPRVLAFDTSDEFNGFPYLLMEY 76 (239)
T ss_dssp EEEEEESSSSEEEEEEETT-SEEEEEEESSH----HHHHHHHHHHHHHHHHHHTTSBS--EEEEEEETEETSEEEEEEEE
T ss_pred CccCCCCCeeeEEEEEECC-cEEEEEEeCCC----CCHHHHHHHHHHHHHHHhcCCCCceEEeecccccccccceEEEEE
Confidence 4689999999999999777 69999996544 3445677888888887532 3456665432 23347899999
Q ss_pred cCCCCHHH----------------HHh---hc--C-CcchH-H--------HHHHH------------HHHHHH-HHHHH
Q 003963 585 LPRGSLFR----------------LLQ---RN--T-TKLDW-R--------RRILM------------ALDIAR-GVSYL 620 (783)
Q Consensus 585 ~~ggsL~~----------------~L~---~~--~-~~l~~-~--------~~~~i------------~~qi~~-aL~~L 620 (783)
++|..+.. .+. .. . ..+.. . ..... ...+.. .+..+
T Consensus 77 i~g~~~~~~~~~~~~~~~~~~~~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (239)
T PF01636_consen 77 IPGRPLDDELSPEQRPELLRQLGRALAQLHQVPPPFSPFADWPEWRLEFLRQLESWTARLRASELFDDLEELEERLLQEL 156 (239)
T ss_dssp ESSEEHHHTSTHHHHHHHHHHHHHHHHHHHHSHTTCCCHTHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
T ss_pred eccccccccccccccccccccchhhhhhcccccccccccccccccccccccccccccccccchhhhhhhHHHHHHHHHHH
Confidence 99987777 111 10 0 00000 0 00000 011222 23333
Q ss_pred Hh-----CCCCEEecCCCCCCEEEc-CCCcEEEEecCCCcc
Q 003963 621 HH-----CNPPIIHRDLKSSNLLVD-KHWTVKVGDFGLSRL 655 (783)
Q Consensus 621 H~-----~~~~IvHrDIKp~NILl~-~~~~vkL~DFGla~~ 655 (783)
+. ....++|+|+.|.|||++ .++.|.|+||+.+..
T Consensus 157 ~~~~~~~~~~~~~HgD~~~~Nil~~~~~~~i~iID~e~a~~ 197 (239)
T PF01636_consen 157 EALLPKPLPPVLIHGDLHPGNILVDPSDGRIGIIDFEDAGW 197 (239)
T ss_dssp HHHHHCCSCEEEE-SS-SGGGEEEESSTTEEEE--GTT-EE
T ss_pred HhhhccCCCcEEEEeccccccceeeeccceeEEEecccceE
Confidence 32 223499999999999999 667778999997743
No 493
>PF06176 WaaY: Lipopolysaccharide core biosynthesis protein (WaaY); InterPro: IPR009330 This family consists of several bacterial lipopolysaccharide core biosynthesis proteins (WaaY or RfaY). The waaY, waaQ, and waaP genes are located in the central operon of the waa (formerly rfa) locus on the chromosome of Escherichia coli. This locus contains genes whose products are involved in the assembly of the core region of the lipopolysaccharide molecule. WaaY is the enzyme that phosphorylates HepII in this system [].; GO: 0009244 lipopolysaccharide core region biosynthetic process
Probab=98.25 E-value=1.2e-05 Score=81.81 Aligned_cols=140 Identities=16% Similarity=0.136 Sum_probs=91.0
Q ss_pred ccccceeEeeeeccCCcEEEEEEEEeCCceEEEEEEecccCCHH-HHHH------HHHHHHHHHhC---CCCceeeEece
Q 003963 502 ILWEDLTIGEQIGQGSCGTVYHAVWYGSQDVAVKVFSRQEYSDE-VIHS------FRQEVSLMKRL---RHPNVLLFMGA 571 (783)
Q Consensus 502 ~~~~~y~i~~~LG~G~fG~Vy~a~~~~~~~vAiK~i~~~~~~~~-~~~~------~~~Ei~il~~l---~HpnIv~l~~~ 571 (783)
+...+|.+.+.+-......|.+.... ++.+++|.........+ .... ..+.+..+..+ .-..++.++.+
T Consensus 28 i~~~~~~~~kv~k~~~r~~ValIei~-~~kyIlK~pr~~~~r~er~~~sf~kg~~~~~l~~~~~~i~~~g~~~~~~~yl~ 106 (229)
T PF06176_consen 28 ILDNNYKIIKVFKNTKRNYVALIEID-GKKYILKEPREENRRPERRFKSFFKGSEYSRLINNTDKIRNEGFTEPADPYLA 106 (229)
T ss_pred HHhCCceEEEeecCCCccEEEEEEEC-CcEEEEeccchhhhhHHHHHHHHhccHHHHHHHHHHHHHHHcCccccccceee
Confidence 45678899898888887777776644 46899998765442221 1111 12233333333 22333333333
Q ss_pred eec-----CCceEEEEEecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEE
Q 003963 572 VTS-----PQRLCIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVK 646 (783)
Q Consensus 572 ~~~-----~~~~~lV~E~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vk 646 (783)
.+. -...+++|||++|..|.++.. +++ .+...|+.++.-||..| ++|+|..|.|++++++ .++
T Consensus 107 ~ekk~~~~~~~~~ll~EYIeG~~l~d~~~-----i~e----~~~~ki~~~ikqlH~~G--~~HGD~hpgNFlv~~~-~i~ 174 (229)
T PF06176_consen 107 AEKKIFRYTSSYVLLMEYIEGVELNDIED-----IDE----DLAEKIVEAIKQLHKHG--FYHGDPHPGNFLVSNN-GIR 174 (229)
T ss_pred eeeeeccceeEEEEEEEEecCeecccchh-----cCH----HHHHHHHHHHHHHHHcC--CccCCCCcCcEEEECC-cEE
Confidence 322 234578999999988876542 222 13345677889999999 9999999999999966 599
Q ss_pred EEecCCCc
Q 003963 647 VGDFGLSR 654 (783)
Q Consensus 647 L~DFGla~ 654 (783)
++||+..+
T Consensus 175 iID~~~k~ 182 (229)
T PF06176_consen 175 IIDTQGKR 182 (229)
T ss_pred EEECcccc
Confidence 99998654
No 494
>PRK15053 dpiB sensor histidine kinase DpiB; Provisional
Probab=98.25 E-value=1.7e-05 Score=92.99 Aligned_cols=114 Identities=19% Similarity=0.200 Sum_probs=82.4
Q ss_pred HHHHHHHHHhCcceEEEcCCCcEEEecHHHHHHcCCCh--hhHcCCCccccccccccchHHHHHHHHHHhCCeEEEEEEE
Q 003963 130 RQYLNILQSMGQSVHIFDLSDRIIYWNRSAELLYGYSA--EEALGQDAIELLTDGRDFDVAYDIVHRIKMGERWTGQFPA 207 (783)
Q Consensus 130 ~~~~~ile~~~d~I~i~D~~G~Ii~~N~aae~L~Gys~--eEllG~~~~~l~~~~~~~~~~~~l~~~l~~g~~~~~e~~~ 207 (783)
+.++.+++++.+||+++|.+|+|+++|++|++++|++. ++++|+++.+++++... +...... ......
T Consensus 222 ~~~~~il~~~~egii~~D~~g~I~~~N~~a~~ll~~~~~~~~~~g~~~~~~~~~~~~------~~~~~~~-~~~~~~--- 291 (545)
T PRK15053 222 RQQEALFSSVYEGLIAVDPHGYITAINRNARKMLGLSSPGRQWLGKPIAEVVRPADF------FTEQIDE-KRQDVV--- 291 (545)
T ss_pred HHHHHHHHHhCceEEEECCCCeEEeecHHHHHHhCCCCcchhhcCCcHHHhCCCchh------hhhhcCC-cccceE---
Confidence 44577999999999999999999999999999999975 57999999888764321 1111111 111111
Q ss_pred EcCCCCEEEEEEEEEEEECCCCCEEEEEEEEEehHHHHHHHHHHHHhhc
Q 003963 208 KTKTEERVLVVATNTPFYDDDGTLVGIVCVSTDSRPFQETRAALWDTKN 256 (783)
Q Consensus 208 ~~kdG~~~~v~~~~~Pi~d~~G~v~g~v~i~rDITerk~~E~~L~~~~~ 256 (783)
...+| ..+.++..|+.. +|++.|++.+++|+|+.++++.++.....
T Consensus 292 ~~~~~--~~~~~~~~~i~~-~~~~~G~v~~~~d~te~~~l~~~l~~~~~ 337 (545)
T PRK15053 292 ANFNG--LSVIANREAIRS-GDDLLGAIISFRSKDEISTLNAQLTQIKQ 337 (545)
T ss_pred EEECC--EEEEEEeeeEEE-CCeEEEEEEEEEchHHHHHHHHHHHHHHH
Confidence 12244 334567778874 56788999999999999998888866543
No 495
>PRK09959 hybrid sensory histidine kinase in two-component regulatory system with EvgA; Provisional
Probab=98.20 E-value=1.1e-05 Score=103.73 Aligned_cols=155 Identities=10% Similarity=0.047 Sum_probs=90.6
Q ss_pred HHHHHHHHHhCcceEEEcCCCcEEEecHHHHHHcCCChhhHcCCCcccccccccc-chHHHHHHHHHHhCCeEEEEEEEE
Q 003963 130 RQYLNILQSMGQSVHIFDLSDRIIYWNRSAELLYGYSAEEALGQDAIELLTDGRD-FDVAYDIVHRIKMGERWTGQFPAK 208 (783)
Q Consensus 130 ~~~~~ile~~~d~I~i~D~~G~Ii~~N~aae~L~Gys~eEllG~~~~~l~~~~~~-~~~~~~l~~~l~~g~~~~~e~~~~ 208 (783)
++++.++++++++|+++|.+|+|+++|++|++++|+...+..+........+-.. .................. .....
T Consensus 576 ~~~~~i~~~~~~~i~~~d~~g~i~~~N~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 654 (1197)
T PRK09959 576 SFRKALSDSLPNPTYVVNWQGNVISHNSAFEHYFTADYYKNAMLPLENSDSPFKDVFSNAHEVTAETKENRTIY-TQVFE 654 (1197)
T ss_pred HHHHHHHhhCCCcEEEEcCCCcEEEehHHHHHHhCcccccccccccccccCchhhhHhHHHHHHHHHhhccccc-eeeEe
Confidence 5578899999999999999999999999999999987543333222211111000 000001111111111111 11122
Q ss_pred cCCCCEEEEEEE-EEEEECCCCCEEEEEEEEEehHHHHHHHHHHHHhhccccccccCCchhHHHHhhcCCchhHHHHHHH
Q 003963 209 TKTEERVLVVAT-NTPFYDDDGTLVGIVCVSTDSRPFQETRAALWDTKNSDTDSNINRPRNTVTAKLGLDSQQPLQATIA 287 (783)
Q Consensus 209 ~kdG~~~~v~~~-~~Pi~d~~G~v~g~v~i~rDITerk~~E~~L~~~~~~~~~~~~~~~~~~l~~~l~~d~~qpl~~~i~ 287 (783)
..+|...++... ..+.....+...++++.++|||++++++++++...+...... ..+..|++.++||+++||..++.
T Consensus 655 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dite~~~~~~~l~~~~~~~~~~~--~~~~~~~~~isHelrtPL~~i~~ 732 (1197)
T PRK09959 655 IDNGIEKRCINHWHTLCNLPASDHAVYICGWQDITETRDLIHALEVERNKAINAT--VAKSQFLATMSHEIRTPISSIMG 732 (1197)
T ss_pred eecCccceeeeeeeeeeccCCCCceEEEEEEEehhHHHHHHHHHHHHHHHHHHHH--HHHHHHHHhcChhhCccHHHHHH
Confidence 233433222222 222222334456788899999999999998877655432221 24456999999999999987543
No 496
>COG1718 RIO1 Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms / Cell division and chromosome partitioning]
Probab=98.18 E-value=1.4e-05 Score=82.10 Aligned_cols=139 Identities=22% Similarity=0.166 Sum_probs=91.3
Q ss_pred eeeeccCCcEEEEEEEEeCCceEEEEEEecccC--------------------CH--HHHHHHHHHHHHHHhCC--CCce
Q 003963 510 GEQIGQGSCGTVYHAVWYGSQDVAVKVFSRQEY--------------------SD--EVIHSFRQEVSLMKRLR--HPNV 565 (783)
Q Consensus 510 ~~~LG~G~fG~Vy~a~~~~~~~vAiK~i~~~~~--------------------~~--~~~~~~~~Ei~il~~l~--HpnI 565 (783)
...|..|.-+.||+|...+...+|+|++..... .. ........|...|+++. +-.+
T Consensus 53 ~g~istGKEA~Vy~a~~~~~~~~avKiyr~~t~~fk~~~~Yi~gd~Rf~~~~~~rr~lv~~W~~kEf~NL~R~~eAGVrv 132 (268)
T COG1718 53 VGCISTGKEANVYLAETGDGRYVAVKIYRTSTSEFKRIRRYIQGDPRFRNSRSNRRKLVFAWARKEFRNLKRAYEAGVRV 132 (268)
T ss_pred EeeecCCcceEEEeeccCCCceEEEEEEehhhhhhhhHHHHHhcChhhhcCCCCHHHHHHHHHHHHHHHHHHHHHcCCCC
Confidence 346778888999999887778999999854321 11 11223445777777764 3334
Q ss_pred eeEeceeecCCceEEEEEecCCCCH-HHHHhhcCCcchHHHHHHHHHHHHHHHHHHHh-CCCCEEecCCCCCCEEEcCCC
Q 003963 566 LLFMGAVTSPQRLCIVTEFLPRGSL-FRLLQRNTTKLDWRRRILMALDIARGVSYLHH-CNPPIIHRDLKSSNLLVDKHW 643 (783)
Q Consensus 566 v~l~~~~~~~~~~~lV~E~~~ggsL-~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~-~~~~IvHrDIKp~NILl~~~~ 643 (783)
++.+.+. ...|||||+....+ .-.|. ..++.......+..++++.+.-|-. .+ +||+||..-|||+. ++
T Consensus 133 P~Pi~~~----~nVLvMEfIg~~g~pAP~Lk--Dv~~e~~e~~~~~~~~v~~~~~l~~~a~--LVHgDLSEyNiL~~-~~ 203 (268)
T COG1718 133 PEPIAFR----NNVLVMEFIGDDGLPAPRLK--DVPLELEEAEGLYEDVVEYMRRLYKEAG--LVHGDLSEYNILVH-DG 203 (268)
T ss_pred CCceeec----CCeEEEEeccCCCCCCCCcc--cCCcCchhHHHHHHHHHHHHHHHHHhcC--cccccchhhheEEE-CC
Confidence 4444433 34799999955311 11111 1123333566666778888877765 66 99999999999999 77
Q ss_pred cEEEEecCCCcccc
Q 003963 644 TVKVGDFGLSRLKH 657 (783)
Q Consensus 644 ~vkL~DFGla~~~~ 657 (783)
.+.|+|||-|....
T Consensus 204 ~p~iID~~QaV~~~ 217 (268)
T COG1718 204 EPYIIDVSQAVTID 217 (268)
T ss_pred eEEEEECccccccC
Confidence 99999999876444
No 497
>PF14598 PAS_11: PAS domain; PDB: 1P97_A 3F1O_A 2A24_A 3H7W_A 3F1P_A 3H82_A 3F1N_A 4F3L_B 4DJ3_A 2KDK_A ....
Probab=98.18 E-value=2.7e-05 Score=71.42 Aligned_cols=95 Identities=22% Similarity=0.307 Sum_probs=78.5
Q ss_pred EEcCCCcEEEecHH-HHHHcCCChhhHcCCCccccccccccch-HHHHHHHHHHhCCeEEEEEEEEcCCCCEEEEEEEEE
Q 003963 145 IFDLSDRIIYWNRS-AELLYGYSAEEALGQDAIELLTDGRDFD-VAYDIVHRIKMGERWTGQFPAKTKTEERVLVVATNT 222 (783)
Q Consensus 145 i~D~~G~Ii~~N~a-ae~L~Gys~eEllG~~~~~l~~~~~~~~-~~~~l~~~l~~g~~~~~e~~~~~kdG~~~~v~~~~~ 222 (783)
-.+.+|+|+++-.. ...++||..+|++|+.+.+|+++++... .......++..|+....-+++..++|..+|+.....
T Consensus 7 rhs~dgki~~~d~~~v~~~lgy~~~eLvG~s~y~~~H~~D~~~~~~~~~~~~~~~g~~~~~~yR~~~k~g~~vwvqt~~~ 86 (111)
T PF14598_consen 7 RHSLDGKITYVDSRAVSSLLGYLPEELVGRSIYDFVHPDDLQRVLKQHHREVLQKGQSVSPYYRFRTKNGGYVWVQTKAT 86 (111)
T ss_dssp EEETTSBEEEEETTHHHHHHSS-HHHHTTSBGGGGBSCCTHHHHHHHHHHHHHHHSSEEEEEEEEE-TTSSEEEEEEEEE
T ss_pred EECCCcEEEEEcCccChhhcCCCcHHHcCCchHHhCCHhhhhhHHHHHHHHHhhCCCcCcceEEEEecCCcEEEEEEEEE
Confidence 36789999999999 5999999999999999999999998764 555677888999988888999999999999999999
Q ss_pred EEECC-CCCEEEEEEEEE
Q 003963 223 PFYDD-DGTLVGIVCVST 239 (783)
Q Consensus 223 Pi~d~-~G~v~g~v~i~r 239 (783)
++.+. .+++..++++-+
T Consensus 87 ~~~n~~~~~~~~Iv~~n~ 104 (111)
T PF14598_consen 87 LFYNPWTSKPEFIVCTNT 104 (111)
T ss_dssp EEEETTTTCEEEEEEEEE
T ss_pred EEECCCCCCccEEEEEEE
Confidence 99864 456666665544
No 498
>COG5000 NtrY Signal transduction histidine kinase involved in nitrogen fixation and metabolism regulation [Signal transduction mechanisms]
Probab=98.13 E-value=1.1e-05 Score=91.04 Aligned_cols=135 Identities=18% Similarity=0.135 Sum_probs=92.2
Q ss_pred HHHHHHHHHhCcceEEEcCCCcEEEecHHHHHHcCCChhhHcCCCccccccccccchHHHHHHHHHHhCCeEEEEEEEEc
Q 003963 130 RQYLNILQSMGQSVHIFDLSDRIIYWNRSAELLYGYSAEEALGQDAIELLTDGRDFDVAYDIVHRIKMGERWTGQFPAKT 209 (783)
Q Consensus 130 ~~~~~ile~~~d~I~i~D~~G~Ii~~N~aae~L~Gys~eEllG~~~~~l~~~~~~~~~~~~l~~~l~~g~~~~~e~~~~~ 209 (783)
++++.+|+.++.||+.+|.+|+|.-+|+++|+|+|.+..+++|+++..+.+.- ...+...-..+.........+.
T Consensus 370 ~f~E~VLsgvtaGVi~~d~~g~i~t~N~~ae~~l~~~~~~~~G~~lsa~ap~~-----~~vf~~~~a~~~~~~~~ev~~~ 444 (712)
T COG5000 370 RFLEAVLSGLTAGVIGFDNRGCITTVNPSAEQILGKPFDQLLGQSLSAIAPEL-----EEVFAEAGAAARTDKRVEVKLA 444 (712)
T ss_pred HHHHHHHhcCceeEEEEcCCCeeEeecchHHHHhcCChhHhhcchhhhhhhHH-----HHHHHHhhhhcCCCccceeecc
Confidence 56788999999999999999999999999999999999999999977654321 1112222222333333333344
Q ss_pred CCCCEEEEEEEEEEEECCCCCEEEEEEEEEehHHHHHHHHHHHHhhccccccccCCchhHHHHhhcCCchhHHHHH
Q 003963 210 KTEERVLVVATNTPFYDDDGTLVGIVCVSTDSRPFQETRAALWDTKNSDTDSNINRPRNTVTAKLGLDSQQPLQAT 285 (783)
Q Consensus 210 kdG~~~~v~~~~~Pi~d~~G~v~g~v~i~rDITerk~~E~~L~~~~~~~~~~~~~~~~~~l~~~l~~d~~qpl~~~ 285 (783)
..|+.+.+.+.++-...++| .|+|.++-|||+...+++.. ....+..++.||++.||.-+
T Consensus 445 r~g~~rtl~Vq~t~~~~d~~--~gyVvt~DDITdLV~AQRs~--------------AW~dVArRIAHEIKNPLTPI 504 (712)
T COG5000 445 REGEERTLNVQATREPEDNG--NGYVVTFDDITDLVIAQRSA--------------AWGDVARRIAHEIKNPLTPI 504 (712)
T ss_pred cCCCceeeeeeeeecccccC--CceEEEecchHHHHHHHHHH--------------HHHHHHHHHHHHhcCCCchh
Confidence 45555655555544432223 47899999999999886653 12336677777777777653
No 499
>COG2202 AtoS FOG: PAS/PAC domain [Signal transduction mechanisms]
Probab=98.09 E-value=5.6e-05 Score=72.10 Aligned_cols=117 Identities=25% Similarity=0.440 Sum_probs=89.4
Q ss_pred HHHHHHHHHhCcceEEEcCCCcEEEecHHHHHHcCCChhhHcCCCccccccccccchHHHHHHHHHH--hCCeEEEEEEE
Q 003963 130 RQYLNILQSMGQSVHIFDLSDRIIYWNRSAELLYGYSAEEALGQDAIELLTDGRDFDVAYDIVHRIK--MGERWTGQFPA 207 (783)
Q Consensus 130 ~~~~~ile~~~d~I~i~D~~G~Ii~~N~aae~L~Gys~eEllG~~~~~l~~~~~~~~~~~~l~~~l~--~g~~~~~e~~~ 207 (783)
..++.+++.++++++++|.+|.|+++|+++++++||+..+.+++....+.................. .......+...
T Consensus 112 ~~~~~~~~~~~~~~~~~d~~~~~~~~n~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (232)
T COG2202 112 ERLRALLEASPDGIWVLDEDGRILYANPAAEELLGYSPEEELGRGLSDLIHPEDEERRELELARALAEGRGGPLEIEYRV 191 (232)
T ss_pred HHHHHHHhhCCceEEEEeCCCCEEEeCHHHHHHhCCChHHhcCCChhheEecCCCchhhHHHHHHhhccCCCCcceEEEE
Confidence 3377899999999999999999999999999999999888888887776654443211112222222 23346778888
Q ss_pred EcCCCCE-EEEEEEEEEEECCCCCEEEEEEEEEehHHHHHH
Q 003963 208 KTKTEER-VLVVATNTPFYDDDGTLVGIVCVSTDSRPFQET 247 (783)
Q Consensus 208 ~~kdG~~-~~v~~~~~Pi~d~~G~v~g~v~i~rDITerk~~ 247 (783)
..++|.. .++.....+... +|.+.+++....|++++++.
T Consensus 192 ~~~~g~~~~~~~~~~~~~~~-~~~~~~~~~~~~d~~~~~~~ 231 (232)
T COG2202 192 RRKDGERVRWILSRISPVRD-DGEIVGVVGIARDITERKQA 231 (232)
T ss_pred EecCCCEEEEEEeeeeEecC-CCceEEEEEEEechHHHhhc
Confidence 8999996 888777777654 78899999999999998764
No 500
>PRK11388 DNA-binding transcriptional regulator DhaR; Provisional
Probab=98.08 E-value=2e-05 Score=94.36 Aligned_cols=107 Identities=19% Similarity=0.198 Sum_probs=81.8
Q ss_pred HHHHHHhCcceEEEcCCCcEEEecHHHHHHcCCChhhHcCCCccccccccccchHHHHHHHHHHhCCeEEEEEEEEcCCC
Q 003963 133 LNILQSMGQSVHIFDLSDRIIYWNRSAELLYGYSAEEALGQDAIELLTDGRDFDVAYDIVHRIKMGERWTGQFPAKTKTE 212 (783)
Q Consensus 133 ~~ile~~~d~I~i~D~~G~Ii~~N~aae~L~Gys~eEllG~~~~~l~~~~~~~~~~~~l~~~l~~g~~~~~e~~~~~kdG 212 (783)
..+++.+.+||+++|.+|+|+++|+++++++|++.++++|+++.+++.... .+..++..++...........+|
T Consensus 206 ~~il~~~~~gVl~vD~~G~I~~~N~aa~~llg~s~~~l~G~~i~~l~~~~~------~l~~vl~~~~~~~~~~~~l~~~g 279 (638)
T PRK11388 206 NALLESMDDGVIAWDEQGNLQFLNAQAARLLRLDATASQGRAITELLTLPA------VLQQAIKQAHPLKHVEVTFESQG 279 (638)
T ss_pred HHHHhccCCcEEEECCCCeEehhhHHHHHHhCcCHHHHCCCcHHHHhccch------HHHHHHhcCCceeeEEEEEecCC
Confidence 448899999999999999999999999999999999999999998875321 24556777776544333344567
Q ss_pred CEEEEEEEEEEEECCCCCEEEEEEEEEehHHHHHH
Q 003963 213 ERVLVVATNTPFYDDDGTLVGIVCVSTDSRPFQET 247 (783)
Q Consensus 213 ~~~~v~~~~~Pi~d~~G~v~g~v~i~rDITerk~~ 247 (783)
..+++.+++.|+.+..| .+++.+++|++..++.
T Consensus 280 ~~~~~~v~~~Pi~~~~g--~~~v~~l~~~~~~~~~ 312 (638)
T PRK11388 280 QFIDAVITLKPIIEGQG--TSFILLLHPVEQMRQL 312 (638)
T ss_pred ceEEEEEEEEeecccCc--eEEEEEehhhHHHHHH
Confidence 77788999999975445 3466677888775543
Done!