Query 003963
Match_columns 783
No_of_seqs 537 out of 3752
Neff 7.7
Searched_HMMs 29240
Date Mon Mar 25 09:43:57 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/003963.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/003963hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4aw0_A HPDK1, 3-phosphoinositi 100.0 1.5E-55 5E-60 473.8 18.6 263 504-771 31-297 (311)
2 4b9d_A Serine/threonine-protei 100.0 5.8E-55 2E-59 476.7 22.9 259 504-771 23-283 (350)
3 3omv_A RAF proto-oncogene seri 100.0 3.6E-54 1.2E-58 463.5 25.6 268 498-770 29-305 (307)
4 4fih_A Serine/threonine-protei 100.0 7.4E-54 2.5E-58 467.2 23.7 257 504-772 73-331 (346)
5 4aoj_A High affinity nerve gro 100.0 9.3E-53 3.2E-57 457.8 29.1 260 501-765 37-319 (329)
6 3hyh_A Carbon catabolite-derep 100.0 3.8E-53 1.3E-57 448.6 24.1 256 504-772 12-270 (275)
7 3fpq_A Serine/threonine-protei 100.0 5E-53 1.7E-57 451.3 25.2 254 507-770 28-288 (290)
8 3ubd_A Ribosomal protein S6 ki 100.0 2.6E-54 8.8E-59 463.7 14.8 257 504-771 23-288 (304)
9 4asz_A BDNF/NT-3 growth factor 100.0 9.9E-53 3.4E-57 451.6 25.1 260 501-765 9-289 (299)
10 4fie_A Serine/threonine-protei 100.0 8.7E-53 3E-57 469.8 25.2 256 504-771 150-407 (423)
11 4g3f_A NF-kappa-beta-inducing 100.0 3.2E-52 1.1E-56 452.9 24.7 254 501-764 54-315 (336)
12 4gt4_A Tyrosine-protein kinase 100.0 4.2E-52 1.4E-56 448.6 24.3 258 501-762 22-303 (308)
13 4ase_A Vascular endothelial gr 100.0 4E-51 1.4E-55 448.7 23.5 265 498-765 57-347 (353)
14 4b99_A Mitogen-activated prote 100.0 2.6E-49 8.7E-54 441.5 25.9 259 504-772 53-352 (398)
15 4g31_A Eukaryotic translation 100.0 9.9E-50 3.4E-54 428.6 19.7 254 505-771 5-286 (299)
16 4f9c_A Cell division cycle 7-r 100.0 1.4E-47 4.9E-52 422.6 26.0 254 503-772 19-360 (361)
17 3hmm_A TGF-beta receptor type- 100.0 5.4E-48 1.9E-52 416.2 21.4 256 504-765 2-297 (303)
18 3v5w_A G-protein coupled recep 100.0 1.8E-47 6E-52 445.6 25.2 257 502-771 186-456 (689)
19 3uto_A Twitchin; kinase, muscl 100.0 3.2E-47 1.1E-51 444.1 25.4 259 503-772 155-418 (573)
20 3p86_A Serine/threonine-protei 100.0 2.2E-45 7.4E-50 396.8 28.6 268 498-766 30-299 (309)
21 3fe3_A MAP/microtubule affinit 100.0 5.2E-45 1.8E-49 397.4 25.8 260 501-772 11-272 (328)
22 3niz_A Rhodanese family protei 100.0 1.8E-44 6E-49 389.7 25.9 265 501-774 17-310 (311)
23 1o6l_A RAC-beta serine/threoni 100.0 1.2E-44 4.1E-49 396.1 23.8 258 503-771 3-267 (337)
24 2psq_A Fibroblast growth facto 100.0 6.4E-44 2.2E-48 395.1 29.2 264 499-766 75-365 (370)
25 3fxz_A Serine/threonine-protei 100.0 3.3E-44 1.1E-48 385.1 24.6 260 503-774 18-279 (297)
26 3zgw_A Maternal embryonic leuc 100.0 3E-44 1E-48 394.4 23.9 261 499-771 4-267 (347)
27 3txo_A PKC-L, NPKC-ETA, protei 100.0 1.1E-44 3.9E-49 398.8 20.0 259 502-771 20-287 (353)
28 4hcu_A Tyrosine-protein kinase 100.0 2.2E-43 7.6E-48 371.9 26.4 261 499-765 4-266 (269)
29 1ob3_A PFPK5, cell division co 100.0 3.7E-44 1.3E-48 382.1 20.7 258 505-771 2-287 (288)
30 4dc2_A Protein kinase C IOTA t 100.0 1.4E-43 4.7E-48 395.6 25.3 259 502-771 49-325 (396)
31 3a62_A Ribosomal protein S6 ki 100.0 1.5E-43 5.3E-48 385.2 24.9 259 502-771 14-283 (327)
32 3kul_A Ephrin type-A receptor 100.0 3.1E-43 1E-47 382.5 26.8 264 499-766 43-314 (325)
33 2zv2_A Calcium/calmodulin-depe 100.0 1.7E-43 5.7E-48 378.8 24.0 258 503-770 11-298 (298)
34 3lb7_A RAF proto-oncogene seri 100.0 2.7E-43 9.3E-48 379.8 25.8 267 498-769 29-304 (307)
35 3a8x_A Protein kinase C IOTA t 100.0 2.6E-43 9E-48 386.6 26.0 258 503-771 7-282 (345)
36 1fot_A TPK1 delta, CAMP-depend 100.0 1.6E-43 5.5E-48 384.0 23.7 255 503-771 4-265 (318)
37 3o0g_A Cell division protein k 100.0 3.4E-43 1.2E-47 375.2 25.3 258 505-771 2-289 (292)
38 2i0e_A Protein kinase C-beta I 100.0 1.2E-43 4E-48 390.6 22.3 259 502-771 17-283 (353)
39 3sxs_A Cytoplasmic tyrosine-pr 100.0 2.8E-43 9.4E-48 370.7 24.1 260 500-765 3-264 (268)
40 1xjd_A Protein kinase C, theta 100.0 6E-44 2E-48 391.8 19.6 259 502-771 14-276 (345)
41 3soa_A Calcium/calmodulin-depe 100.0 3.6E-43 1.2E-47 398.2 26.5 259 503-770 9-273 (444)
42 2r5t_A Serine/threonine-protei 100.0 9.9E-44 3.4E-48 394.1 21.4 263 502-771 35-300 (373)
43 3gen_A Tyrosine-protein kinase 100.0 6.3E-43 2.1E-47 370.9 26.4 263 498-766 17-281 (283)
44 2yab_A Death-associated protei 100.0 3.5E-43 1.2E-47 388.1 25.3 259 502-770 9-278 (361)
45 3kmu_A ILK, integrin-linked ki 100.0 3.2E-43 1.1E-47 369.6 23.4 259 501-765 6-270 (271)
46 2bdw_A Hypothetical protein K1 100.0 5.3E-43 1.8E-47 386.7 26.0 258 503-770 27-290 (362)
47 1tki_A Titin; serine kinase, m 100.0 3.3E-43 1.1E-47 381.8 23.3 258 503-772 3-265 (321)
48 4ejn_A RAC-alpha serine/threon 100.0 1.2E-43 4E-48 402.7 20.6 260 501-771 144-411 (446)
49 3cbl_A C-FES, proto-oncogene t 100.0 2.8E-43 9.5E-48 390.9 23.1 264 499-766 108-375 (377)
50 1rdq_E PKA C-alpha, CAMP-depen 100.0 3E-43 1E-47 386.9 22.3 256 502-771 38-300 (350)
51 3s95_A LIMK-1, LIM domain kina 100.0 5.9E-43 2E-47 376.6 24.1 262 503-768 8-285 (310)
52 1mp8_A Focal adhesion kinase 1 100.0 1.2E-42 4E-47 369.0 24.9 264 498-766 8-277 (281)
53 3vhe_A Vascular endothelial gr 100.0 4.1E-43 1.4E-47 385.3 21.8 269 495-766 12-356 (359)
54 3v8s_A RHO-associated protein 100.0 1.7E-43 5.9E-48 396.7 19.0 261 501-771 65-336 (410)
55 4agu_A Cyclin-dependent kinase 100.0 1.2E-42 4E-47 374.0 24.3 262 504-774 2-294 (311)
56 3gni_B Strad alpha; kinase fol 100.0 1.4E-42 4.9E-47 386.3 25.8 265 501-773 21-342 (389)
57 2y0a_A Death-associated protei 100.0 1.4E-42 4.8E-47 377.5 25.0 260 502-771 8-278 (326)
58 4aw2_A Serine/threonine-protei 100.0 2.2E-43 7.4E-48 399.0 19.2 263 501-771 70-345 (437)
59 3kk8_A Calcium/calmodulin depe 100.0 4.7E-42 1.6E-46 364.1 28.3 260 504-773 5-270 (284)
60 3tt0_A Basic fibroblast growth 100.0 4.3E-42 1.5E-46 381.9 29.2 265 499-767 63-354 (382)
61 1luf_A Muscle-specific tyrosin 100.0 1.3E-42 4.3E-47 378.7 24.4 266 498-767 40-337 (343)
62 2vd5_A DMPK protein; serine/th 100.0 2.6E-43 9E-48 395.5 19.5 262 501-771 57-334 (412)
63 3t9t_A Tyrosine-protein kinase 100.0 2.5E-42 8.5E-47 362.6 25.6 260 500-765 3-264 (267)
64 3c0i_A Peripheral plasma membr 100.0 6.6E-43 2.3E-47 384.1 22.0 259 503-770 22-292 (351)
65 2ivs_A Proto-oncogene tyrosine 100.0 2.7E-42 9.3E-47 371.0 25.6 263 499-765 17-311 (314)
66 4fr4_A YANK1, serine/threonine 100.0 1.4E-42 4.8E-47 386.1 23.2 259 501-771 11-278 (384)
67 2w4o_A Calcium/calmodulin-depe 100.0 1.6E-42 5.4E-47 380.9 23.4 259 501-773 49-314 (349)
68 2pmi_A Negative RE, cyclin-dep 100.0 9.2E-43 3.2E-47 377.1 21.1 261 504-774 4-303 (317)
69 3cok_A Serine/threonine-protei 100.0 4.7E-43 1.6E-47 370.9 18.4 262 503-774 9-272 (278)
70 2owb_A Serine/threonine-protei 100.0 2.9E-42 1E-46 376.1 25.1 259 502-771 38-298 (335)
71 3h4j_B AMPK kdaid, SNF1-like p 100.0 2.1E-43 7.1E-48 386.1 16.0 257 503-772 7-266 (336)
72 3tki_A Serine/threonine-protei 100.0 1.2E-42 4.2E-47 377.6 21.7 259 504-772 6-269 (323)
73 3dtc_A Mitogen-activated prote 100.0 2.5E-42 8.7E-47 363.6 23.2 258 501-763 3-271 (271)
74 3dbq_A Dual specificity protei 100.0 4.1E-42 1.4E-46 376.2 25.4 261 501-772 5-281 (343)
75 2eue_A Carbon catabolite derep 100.0 1.5E-42 5.2E-47 366.7 21.1 259 502-773 10-271 (275)
76 1t46_A HOMO sapiens V-KIT hard 100.0 5.1E-42 1.7E-46 368.7 25.6 266 498-766 16-308 (313)
77 3ugc_A Tyrosine-protein kinase 100.0 3.5E-42 1.2E-46 367.7 24.0 261 501-766 6-292 (295)
78 3og7_A AKAP9-BRAF fusion prote 100.0 3E-42 1E-46 367.6 23.3 262 498-764 17-287 (289)
79 2qol_A Ephrin receptor; recept 100.0 2.8E-42 9.4E-47 382.5 23.9 265 499-767 39-311 (373)
80 2c30_A Serine/threonine-protei 100.0 5.9E-42 2E-46 371.7 25.9 254 506-771 46-301 (321)
81 1rjb_A FL cytokine receptor; k 100.0 4.2E-42 1.4E-46 375.2 24.9 266 498-766 38-335 (344)
82 3fdn_A Serine/threonine-protei 100.0 2.4E-42 8.2E-47 365.9 22.0 260 502-774 6-267 (279)
83 3qup_A Tyrosine-protein kinase 100.0 2.3E-42 7.8E-47 374.0 22.3 266 499-767 17-300 (323)
84 3l9p_A Anaplastic lymphoma kin 100.0 3.1E-42 1E-46 381.2 23.6 263 501-767 67-347 (367)
85 1u59_A Tyrosine-protein kinase 100.0 2E-41 7E-46 360.6 29.0 267 501-772 5-279 (287)
86 3hko_A Calcium/calmodulin-depe 100.0 4.7E-42 1.6E-46 374.7 24.3 268 501-776 22-342 (345)
87 1kob_A Twitchin; kinase, intra 100.0 5.7E-42 2E-46 381.8 25.4 261 503-774 49-314 (387)
88 4eqm_A Protein kinase; transfe 100.0 6.7E-42 2.3E-46 366.4 24.8 260 501-763 7-273 (294)
89 2x4f_A Myosin light chain kina 100.0 8.2E-42 2.8E-46 378.7 26.3 255 506-771 88-349 (373)
90 3uc3_A Serine/threonine-protei 100.0 5.7E-42 1.9E-46 378.3 24.9 256 503-771 18-281 (361)
91 1p4o_A Insulin-like growth fac 100.0 3.6E-42 1.2E-46 372.0 22.7 272 499-774 19-308 (322)
92 3mtl_A Cell division protein k 100.0 1.2E-42 4.1E-47 377.4 18.9 261 505-775 2-292 (324)
93 3p1a_A MYT1 kinase, membrane-a 100.0 5.7E-42 1.9E-46 369.9 24.1 255 502-770 54-310 (311)
94 2zmd_A Dual specificity protei 100.0 9E-42 3.1E-46 380.7 26.2 258 503-771 54-327 (390)
95 1u5q_A Serine/threonine protei 100.0 9.7E-42 3.3E-46 374.6 25.8 256 504-772 53-313 (348)
96 3rp9_A Mitogen-activated prote 100.0 6.6E-42 2.3E-46 389.4 25.3 260 504-773 52-405 (458)
97 4f0f_A Serine/threonine-protei 100.0 7.7E-42 2.6E-46 363.3 24.1 257 502-763 16-287 (287)
98 2pvf_A Fibroblast growth facto 100.0 2.3E-41 7.8E-46 368.6 28.2 266 499-768 29-321 (334)
99 1qpc_A LCK kinase; alpha beta 100.0 1.8E-41 6.1E-46 359.0 26.6 262 499-767 7-271 (279)
100 3brb_A Proto-oncogene tyrosine 100.0 1.2E-41 4.2E-46 366.6 25.8 271 493-766 22-309 (313)
101 3gbz_A Kinase, CMGC CDK; ssgci 100.0 1.9E-42 6.4E-47 376.7 19.5 260 503-772 32-326 (329)
102 1k9a_A Carboxyl-terminal SRC k 100.0 1E-41 3.6E-46 387.3 26.3 257 499-766 187-446 (450)
103 2y94_A 5'-AMP-activated protei 100.0 6.2E-42 2.1E-46 391.1 24.1 260 501-772 12-274 (476)
104 1t4h_A Serine/threonine-protei 100.0 1.5E-41 5.2E-46 361.8 25.4 260 502-771 23-289 (290)
105 2xir_A Vascular endothelial gr 100.0 7.9E-42 2.7E-46 367.8 23.3 268 498-768 20-313 (316)
106 2rku_A Serine/threonine-protei 100.0 1.5E-41 5.3E-46 362.5 25.4 260 502-772 12-273 (294)
107 1mqb_A Ephrin type-A receptor 100.0 3.5E-41 1.2E-45 367.4 28.5 265 499-767 38-311 (333)
108 2vgo_A Serine/threonine-protei 100.0 1E-41 3.5E-46 362.1 23.5 263 502-777 11-275 (284)
109 1qcf_A Haematopoetic cell kina 100.0 5.8E-42 2E-46 389.8 23.0 259 498-763 181-442 (454)
110 3llt_A Serine/threonine kinase 100.0 1.2E-41 4.1E-46 374.3 24.5 255 500-769 30-360 (360)
111 3oz6_A Mitogen-activated prote 100.0 9.3E-42 3.2E-46 379.7 23.9 260 502-772 6-336 (388)
112 1cm8_A Phosphorylated MAP kina 100.0 1.9E-41 6.6E-46 374.8 26.1 256 504-773 24-316 (367)
113 3fme_A Dual specificity mitoge 100.0 7.8E-42 2.7E-46 363.2 21.8 265 500-774 2-276 (290)
114 3cc6_A Protein tyrosine kinase 100.0 2.5E-41 8.7E-46 358.4 25.7 262 500-766 7-274 (281)
115 3kfa_A Tyrosine-protein kinase 100.0 9.9E-42 3.4E-46 362.4 22.6 264 497-766 5-272 (288)
116 3an0_A Dual specificity mitoge 100.0 6.8E-42 2.3E-46 373.2 21.8 268 499-777 45-323 (340)
117 3soc_A Activin receptor type-2 100.0 5.8E-42 2E-46 371.7 20.7 260 499-766 18-319 (322)
118 1csn_A Casein kinase-1; phosph 100.0 2.8E-41 9.7E-46 360.3 25.7 260 501-767 6-285 (298)
119 2i1m_A Macrophage colony-stimu 100.0 1.3E-41 4.6E-46 369.5 23.6 266 499-767 40-328 (333)
120 3c4z_A Rhodopsin kinase; Ser/T 100.0 7.8E-42 2.7E-46 395.2 23.0 259 503-771 183-455 (543)
121 3f3z_A Calcium/calmodulin-depe 100.0 1.7E-41 5.8E-46 358.8 23.7 256 504-774 8-271 (277)
122 4aaa_A Cyclin-dependent kinase 100.0 7.2E-42 2.5E-46 372.0 21.3 261 502-771 22-313 (331)
123 2wqm_A Serine/threonine-protei 100.0 7.1E-41 2.4E-45 360.1 28.8 262 503-766 30-298 (310)
124 3poz_A Epidermal growth factor 100.0 1.1E-41 3.9E-46 370.2 22.9 260 502-766 12-279 (327)
125 4e5w_A Tyrosine-protein kinase 100.0 2E-41 7E-46 362.4 24.5 260 502-764 18-301 (302)
126 3qd2_B Eukaryotic translation 100.0 5.8E-42 2E-46 370.8 20.2 256 504-771 5-332 (332)
127 3mwu_A Calmodulin-domain prote 100.0 9.8E-42 3.3E-46 391.1 23.2 261 503-774 20-286 (486)
128 3pfq_A PKC-B, PKC-beta, protei 100.0 7.8E-42 2.7E-46 406.5 23.1 260 501-771 337-604 (674)
129 2izr_A Casein kinase I isoform 100.0 1.3E-41 4.4E-46 369.9 22.9 257 503-767 7-283 (330)
130 1xbb_A Tyrosine-protein kinase 100.0 5.2E-41 1.8E-45 358.2 27.0 262 501-767 12-281 (291)
131 3g33_A Cell division protein k 100.0 8E-42 2.7E-46 367.4 20.8 260 502-771 6-303 (308)
132 2a2a_A Death-associated protei 100.0 2.5E-41 8.6E-46 366.1 24.7 260 502-771 9-279 (321)
133 3is5_A Calcium-dependent prote 100.0 1.9E-41 6.6E-46 360.8 23.1 256 504-770 21-284 (285)
134 2qr7_A Ribosomal protein S6 ki 100.0 1.1E-41 3.7E-46 373.4 21.8 253 503-770 20-283 (342)
135 3pls_A Macrophage-stimulating 100.0 5.9E-41 2E-45 357.9 26.8 260 506-769 22-291 (298)
136 1opk_A P150, C-ABL, proto-onco 100.0 2.1E-41 7.3E-46 389.3 25.0 260 498-763 213-476 (495)
137 3com_A Serine/threonine-protei 100.0 4.5E-41 1.5E-45 362.1 26.0 259 502-772 26-286 (314)
138 1u46_A ACK-1, activated CDC42 100.0 2.2E-41 7.4E-46 360.0 23.2 262 501-765 14-284 (291)
139 4fvq_A Tyrosine-protein kinase 100.0 5.6E-42 1.9E-46 364.4 18.6 255 501-766 4-276 (289)
140 3bhy_A Death-associated protei 100.0 2.1E-41 7E-46 359.0 22.6 261 504-774 4-275 (283)
141 2x7f_A TRAF2 and NCK-interacti 100.0 3.5E-41 1.2E-45 364.9 24.8 261 501-772 20-294 (326)
142 3lij_A Calcium/calmodulin depe 100.0 2.3E-41 8E-46 388.8 24.8 258 503-771 35-298 (494)
143 3f66_A Hepatocyte growth facto 100.0 3.4E-41 1.2E-45 360.3 24.3 262 504-769 24-295 (298)
144 2w5a_A Serine/threonine-protei 100.0 7.6E-42 2.6E-46 361.5 19.1 263 504-773 5-276 (279)
145 1fmk_A C-SRC, P60-SRC, tyrosin 100.0 1.8E-41 6.2E-46 385.5 23.5 259 498-763 177-438 (452)
146 2qkw_B Protein kinase; three-h 100.0 3.6E-42 1.2E-46 372.6 16.9 263 499-765 33-315 (321)
147 3kex_A Receptor tyrosine-prote 100.0 6.8E-42 2.3E-46 371.5 19.0 259 502-765 10-276 (325)
148 3op5_A Serine/threonine-protei 100.0 2.4E-41 8.2E-46 373.2 23.7 264 501-767 31-331 (364)
149 1ua2_A CAK, cell division prot 100.0 1.8E-41 6.1E-46 371.6 22.0 261 503-772 8-299 (346)
150 1x8b_A WEE1HU, WEE1-like prote 100.0 2.7E-41 9.3E-46 357.5 22.6 252 504-771 10-286 (289)
151 2h6d_A 5'-AMP-activated protei 100.0 2.3E-41 8E-46 357.2 21.9 260 501-772 7-269 (276)
152 3q5i_A Protein kinase; CDPK, m 100.0 4.5E-41 1.5E-45 387.4 26.2 261 503-774 34-311 (504)
153 1nxk_A MAP kinase-activated pr 100.0 4.6E-41 1.6E-45 376.2 25.5 255 502-772 58-329 (400)
154 1fvr_A Tyrosine-protein kinase 100.0 3.7E-41 1.3E-45 365.6 23.9 265 502-771 22-306 (327)
155 2acx_A G protein-coupled recep 100.0 1.5E-41 5.1E-46 394.2 22.0 259 502-771 181-451 (576)
156 2r3i_A Cell division protein k 100.0 2.5E-41 8.6E-46 361.2 22.0 262 504-774 2-293 (299)
157 1byg_A CSK, protein (C-termina 100.0 2.7E-41 9.1E-46 357.7 21.8 259 499-768 15-276 (278)
158 3a7i_A MST3 kinase, serine/thr 100.0 5.3E-41 1.8E-45 359.9 24.3 256 504-771 21-277 (303)
159 3lzb_A Epidermal growth factor 100.0 3.3E-41 1.1E-45 366.8 23.0 260 502-766 12-279 (327)
160 3lxl_A Tyrosine-protein kinase 100.0 4E-41 1.4E-45 365.3 23.6 269 503-775 21-313 (327)
161 3mi9_A Cell division protein k 100.0 2.8E-41 9.6E-46 370.2 22.5 260 504-772 16-319 (351)
162 3kn6_A Ribosomal protein S6 ki 100.0 1.4E-41 4.6E-46 369.7 19.8 254 504-773 7-279 (325)
163 3ork_A Serine/threonine protei 100.0 1.6E-41 5.5E-46 366.0 20.3 252 502-756 9-271 (311)
164 3ttj_A Mitogen-activated prote 100.0 2.5E-41 8.4E-46 385.6 22.9 255 503-770 60-361 (464)
165 3lxp_A Non-receptor tyrosine-p 100.0 7E-41 2.4E-45 362.4 24.8 260 506-770 32-315 (318)
166 2j7t_A Serine/threonine-protei 100.0 1.7E-41 6E-46 363.0 19.8 261 503-773 17-284 (302)
167 3lm5_A Serine/threonine-protei 100.0 2.3E-41 7.9E-46 367.8 20.8 263 501-772 24-295 (327)
168 3eqc_A Dual specificity mitoge 100.0 4.8E-41 1.6E-45 369.6 23.5 260 501-772 29-332 (360)
169 2jam_A Calcium/calmodulin-depe 100.0 9.1E-41 3.1E-45 358.5 25.0 260 503-775 7-272 (304)
170 2clq_A Mitogen-activated prote 100.0 3.7E-41 1.3E-45 358.9 21.4 267 497-773 14-287 (295)
171 3n9x_A Phosphotransferase; mal 100.0 1.6E-40 5.6E-45 375.4 27.8 262 503-774 24-371 (432)
172 4euu_A Serine/threonine-protei 100.0 3.2E-41 1.1E-45 364.8 21.1 258 503-764 7-308 (319)
173 3nyv_A Calmodulin-domain prote 100.0 1.4E-41 4.7E-46 389.5 19.1 260 502-772 23-289 (484)
174 3c1x_A Hepatocyte growth facto 100.0 3.6E-41 1.2E-45 373.6 21.8 264 505-772 89-362 (373)
175 2y7j_A Phosphorylase B kinase 100.0 1.3E-40 4.3E-45 368.0 26.1 259 502-770 91-365 (365)
176 3q4u_A Activin receptor type-1 100.0 6.3E-41 2.1E-45 358.2 22.8 252 502-763 5-300 (301)
177 2ozo_A Tyrosine-protein kinase 100.0 1.7E-40 5.7E-45 391.3 28.3 261 501-766 331-599 (613)
178 3dls_A PAS domain-containing s 100.0 1.8E-41 6.1E-46 370.4 18.3 252 503-772 22-282 (335)
179 2yex_A Serine/threonine-protei 100.0 6.2E-41 2.1E-45 353.7 21.8 261 504-774 6-271 (276)
180 2h8h_A Proto-oncogene tyrosine 100.0 4.4E-41 1.5E-45 390.3 22.6 258 499-763 261-521 (535)
181 3kvw_A DYRK2, dual specificity 100.0 2.5E-40 8.5E-45 373.7 26.6 259 501-774 93-418 (429)
182 3nsz_A CK II alpha, casein kin 100.0 1.4E-40 4.8E-45 360.8 23.7 252 504-773 35-328 (330)
183 2yfx_A Tyrosine-protein kinase 100.0 1.2E-40 4.2E-45 361.5 23.1 263 501-767 26-306 (327)
184 2eva_A TAK1 kinase - TAB1 chim 100.0 1.9E-40 6.4E-45 357.4 24.2 253 502-767 5-265 (307)
185 4e7w_A Glycogen synthase kinas 100.0 1.2E-40 4.3E-45 371.9 23.6 258 501-774 36-331 (394)
186 1vzo_A Ribosomal protein S6 ki 100.0 1.7E-41 5.9E-46 373.4 16.3 259 502-771 51-328 (355)
187 2dyl_A Dual specificity mitoge 100.0 1.4E-40 4.7E-45 358.4 22.8 264 498-771 18-290 (318)
188 3eb0_A Putative uncharacterize 100.0 8E-41 2.7E-45 371.7 21.5 255 502-772 4-329 (383)
189 1j1b_A Glycogen synthase kinas 100.0 9.9E-41 3.4E-45 375.9 22.3 255 504-774 53-346 (420)
190 2wtk_C Serine/threonine-protei 100.0 1.7E-40 5.9E-45 355.8 23.1 261 503-774 3-273 (305)
191 2v62_A Serine/threonine-protei 100.0 3.6E-41 1.2E-45 369.0 18.0 257 501-763 33-326 (345)
192 2xrw_A Mitogen-activated prote 100.0 3.2E-40 1.1E-44 365.4 25.7 255 503-770 23-324 (371)
193 2fst_X Mitogen-activated prote 100.0 6.7E-41 2.3E-45 370.6 20.2 256 504-773 28-320 (367)
194 1phk_A Phosphorylase kinase; g 100.0 3.1E-40 1.1E-44 352.6 24.6 260 503-772 15-291 (298)
195 3cek_A Dual specificity protei 100.0 3.7E-40 1.3E-44 355.3 25.3 264 500-774 23-302 (313)
196 3pg1_A Mitogen-activated prote 100.0 1E-40 3.6E-45 367.0 21.4 262 501-772 18-324 (362)
197 4exu_A Mitogen-activated prote 100.0 2.8E-40 9.7E-45 365.8 24.3 255 503-772 40-331 (371)
198 2pml_X PFPK7, Ser/Thr protein 100.0 4.8E-41 1.6E-45 367.2 17.9 259 501-772 27-330 (348)
199 2wei_A Calmodulin-domain prote 100.0 1.2E-40 4.1E-45 354.6 20.4 261 502-773 19-285 (287)
200 3g2f_A Bone morphogenetic prot 100.0 1.4E-40 4.7E-45 361.8 21.3 264 501-774 9-327 (336)
201 1blx_A Cyclin-dependent kinase 100.0 2.1E-40 7.2E-45 358.5 22.6 261 504-774 10-306 (326)
202 3uzp_A CKI-delta, CKID, casein 100.0 5.7E-40 1.9E-44 349.9 25.5 258 503-767 7-282 (296)
203 4hgt_A Casein kinase I isoform 100.0 5.4E-40 1.8E-44 349.8 25.3 257 504-767 8-282 (296)
204 2ac3_A MAP kinase-interacting 100.0 1.2E-40 4.1E-45 359.1 20.5 258 504-774 11-305 (316)
205 3uim_A Brassinosteroid insensi 100.0 9E-42 3.1E-46 369.8 11.7 261 499-762 24-308 (326)
206 3byv_A Rhoptry kinase; malaria 100.0 1E-41 3.5E-46 378.0 12.4 250 504-772 72-367 (377)
207 2h34_A Serine/threonine-protei 100.0 2.6E-40 8.8E-45 356.5 23.0 258 503-763 32-294 (309)
208 3qyz_A Mitogen-activated prote 100.0 3.8E-40 1.3E-44 363.5 24.8 256 504-771 26-320 (364)
209 2y4i_B KSR2, HKSR2, kinase sup 100.0 1.3E-41 4.6E-46 366.8 12.9 266 497-767 25-304 (319)
210 3q60_A ROP5B; pseudokinase, tr 100.0 2.5E-41 8.5E-46 374.0 15.2 257 504-772 61-360 (371)
211 2w1i_A JAK2; chromosomal rearr 100.0 3.6E-40 1.2E-44 357.8 23.5 262 502-767 38-324 (326)
212 1z57_A Dual specificity protei 100.0 2.8E-40 9.7E-45 358.2 22.5 258 501-773 10-337 (339)
213 2vwi_A Serine/threonine-protei 100.0 3.3E-41 1.1E-45 360.4 14.9 267 498-773 8-296 (303)
214 3ll6_A Cyclin G-associated kin 100.0 5.2E-40 1.8E-44 356.2 24.3 262 499-767 22-310 (337)
215 4fl3_A Tyrosine-protein kinase 100.0 4.7E-40 1.6E-44 388.7 25.5 259 504-767 367-633 (635)
216 2b9h_A MAP kinase FUS3, mitoge 100.0 9.4E-40 3.2E-44 357.7 25.8 260 503-774 9-315 (353)
217 3i6u_A CDS1, serine/threonine- 100.0 1.2E-40 4.2E-45 375.0 19.2 258 502-770 132-405 (419)
218 3mdy_A Bone morphogenetic prot 100.0 7.1E-40 2.4E-44 355.8 24.2 256 501-766 33-332 (337)
219 3coi_A Mitogen-activated prote 100.0 1E-39 3.5E-44 358.3 24.3 256 503-773 22-314 (353)
220 2buj_A Serine/threonine-protei 100.0 5.2E-40 1.8E-44 354.3 21.5 260 501-765 25-306 (317)
221 2jii_A Serine/threonine-protei 100.0 4.5E-40 1.5E-44 361.2 21.3 256 503-768 40-339 (352)
222 2a19_B Interferon-induced, dou 100.0 6.2E-40 2.1E-44 347.2 21.7 251 503-768 9-277 (284)
223 3e7e_A HBUB1, BUB1A, mitotic c 100.0 1.6E-39 5.6E-44 358.4 25.5 260 498-770 58-344 (365)
224 1wak_A Serine/threonine-protei 100.0 2.6E-40 9.1E-45 367.1 19.2 254 502-770 34-397 (397)
225 2i6l_A Mitogen-activated prote 100.0 9.8E-40 3.3E-44 351.4 22.1 259 502-773 8-314 (320)
226 2ycf_A Serine/threonine-protei 100.0 3.6E-40 1.2E-44 357.0 18.7 256 503-769 8-279 (322)
227 2j0j_A Focal adhesion kinase 1 100.0 3.1E-39 1.1E-43 383.0 27.4 264 498-766 383-652 (656)
228 2nru_A Interleukin-1 receptor- 100.0 7.2E-40 2.5E-44 351.5 19.9 254 507-764 33-305 (307)
229 1zy4_A Serine/threonine-protei 100.0 1.1E-39 3.7E-44 348.0 20.2 254 504-771 5-290 (303)
230 4eut_A Serine/threonine-protei 100.0 5.4E-40 1.8E-44 366.9 18.5 261 502-766 6-310 (396)
231 3e3p_A Protein kinase, putativ 100.0 1.8E-39 6.1E-44 356.4 21.9 261 501-774 19-324 (360)
232 3sv0_A Casein kinase I-like; t 100.0 3.2E-39 1.1E-43 369.3 24.9 257 503-766 5-279 (483)
233 1b6c_B TGF-B superfamily recep 100.0 2.4E-39 8.1E-44 352.7 22.4 256 501-766 38-337 (342)
234 3aln_A Dual specificity mitoge 100.0 1.4E-39 4.9E-44 352.9 20.5 261 498-770 15-291 (327)
235 2vx3_A Dual specificity tyrosi 100.0 3.1E-39 1.1E-43 358.7 23.4 259 501-772 50-380 (382)
236 3rgf_A Cyclin-dependent kinase 100.0 9.9E-40 3.4E-44 365.6 19.5 256 504-772 19-341 (405)
237 2eu9_A Dual specificity protei 100.0 3.6E-39 1.2E-43 352.2 22.5 257 501-772 15-341 (355)
238 2iwi_A Serine/threonine-protei 100.0 1.4E-39 4.9E-44 350.3 17.3 259 499-776 25-295 (312)
239 3fhr_A MAP kinase-activated pr 100.0 3.8E-39 1.3E-43 351.9 20.8 255 503-773 26-296 (336)
240 3a99_A Proto-oncogene serine/t 100.0 2E-39 6.7E-44 351.5 16.6 254 500-772 38-301 (320)
241 1q8y_A SR protein kinase; tran 100.0 4.6E-39 1.6E-43 354.7 19.1 257 502-773 16-342 (373)
242 3gxj_A TGF-beta receptor type- 100.0 4E-41 1.4E-45 359.8 1.5 252 504-765 2-297 (303)
243 3p23_A Serine/threonine-protei 100.0 4.8E-39 1.7E-43 363.4 16.7 255 502-770 21-289 (432)
244 2rio_A Serine/threonine-protei 100.0 1.7E-37 5.7E-42 351.1 22.1 250 505-769 15-300 (434)
245 3uqc_A Probable conserved tran 100.0 4.6E-37 1.6E-41 328.1 21.0 232 502-766 28-266 (286)
246 3m2w_A MAP kinase-activated pr 100.0 9.7E-37 3.3E-41 326.8 22.9 236 502-774 14-266 (299)
247 3dzo_A Rhoptry kinase domain; 100.0 3.2E-37 1.1E-41 346.4 14.8 242 504-758 77-363 (413)
248 2vuw_A Serine/threonine-protei 100.0 4.4E-38 1.5E-42 342.9 6.1 246 502-769 17-336 (336)
249 3qa8_A MGC80376 protein; kinas 100.0 2E-37 6.8E-42 363.4 11.6 257 504-770 13-303 (676)
250 2pzi_A Probable serine/threoni 100.0 1.7E-36 5.8E-41 361.8 18.5 247 501-767 76-330 (681)
251 4azs_A Methyltransferase WBDD; 100.0 1.1E-29 3.6E-34 296.2 6.2 186 511-703 240-435 (569)
252 3en9_A Glycoprotease, O-sialog 99.9 5.5E-26 1.9E-30 263.3 8.3 186 508-707 339-539 (540)
253 1zar_A RIO2 kinase; serine kin 99.9 2.1E-22 7.3E-27 214.2 10.0 146 506-679 91-252 (282)
254 1zth_A RIO1 serine protein kin 99.8 3.8E-19 1.3E-23 186.5 10.6 139 506-656 48-219 (258)
255 2gj3_A Nitrogen fixation regul 99.8 3.1E-18 1.1E-22 156.1 14.7 118 128-245 3-120 (120)
256 4hia_A LOV protein; PAS, HTH, 99.8 2.4E-18 8.4E-23 167.2 12.3 121 130-250 7-130 (176)
257 2pr5_A Blue-light photorecepto 99.8 1.3E-17 4.6E-22 154.5 15.8 123 133-257 2-127 (132)
258 3p7n_A Sensor histidine kinase 99.7 6.4E-17 2.2E-21 168.4 16.7 122 125-246 58-182 (258)
259 1n9l_A PHOT-LOV1, putative blu 99.7 6.2E-17 2.1E-21 145.5 14.1 105 139-243 2-109 (109)
260 3ue6_A Aureochrome1; PAS/LOV d 99.7 2.6E-16 9.1E-21 150.2 17.0 126 127-252 32-160 (166)
261 3sw1_A Sensory box protein; li 99.7 5.9E-16 2E-20 147.3 17.7 134 125-258 20-156 (162)
262 3t50_A Blue-light-activated hi 99.7 2.1E-16 7.2E-21 144.0 13.4 119 135-253 2-123 (128)
263 3k3c_A Protein RV1364C/MT1410; 99.7 8.9E-16 3E-20 146.0 15.0 128 128-257 15-148 (158)
264 3f1p_B ARYL hydrocarbon recept 99.7 1.2E-16 4.1E-21 145.3 8.5 117 130-246 2-120 (121)
265 2vv6_A FIXL, sensor protein FI 99.6 7.8E-16 2.7E-20 139.6 12.3 113 139-253 2-118 (119)
266 3mr0_A Sensory box histidine k 99.6 2.3E-15 8E-20 141.5 15.8 133 125-257 4-138 (142)
267 4eet_B Phototropin-2; LOV, blu 99.6 1.8E-15 6.1E-20 133.9 13.1 110 135-244 2-114 (115)
268 4gyi_A RIO2 kinase; protein ki 99.6 4.5E-16 1.5E-20 171.1 10.7 136 507-655 97-264 (397)
269 3mqq_A Transcriptional regulat 99.6 6.2E-16 2.1E-20 140.3 9.7 114 132-247 5-119 (120)
270 3f1p_A Endothelial PAS domain- 99.6 8E-16 2.7E-20 138.7 9.2 108 139-246 8-116 (117)
271 3lyx_A Sensory BOX/ggdef domai 99.6 4.1E-15 1.4E-19 131.9 13.5 120 128-247 5-124 (124)
272 2r78_A Sensor protein; sensory 99.6 4.1E-15 1.4E-19 135.1 13.6 114 123-242 4-117 (117)
273 2z6d_A Phototropin-2; PAS-fold 99.6 5.8E-15 2E-19 131.9 14.5 122 129-250 5-129 (130)
274 3ewk_A Sensor protein; PAS dom 99.6 5.8E-15 2E-19 150.7 15.2 112 143-254 2-113 (227)
275 3nja_A Probable ggdef family p 99.6 3E-15 1E-19 134.5 11.3 121 126-246 3-125 (125)
276 3mxq_A Sensor protein; PSI2, M 99.6 2.3E-15 7.8E-20 144.8 10.2 118 130-248 22-151 (152)
277 3luq_A Sensor protein; PAS, hi 99.6 1.3E-14 4.4E-19 128.3 13.3 112 129-242 2-114 (114)
278 3kx0_X Uncharacterized protein 99.6 9.7E-15 3.3E-19 144.0 12.8 124 128-253 35-164 (185)
279 2wkq_A NPH1-1, RAS-related C3 99.6 1.2E-14 4E-19 157.1 13.1 117 135-251 16-135 (332)
280 1d06_A Nitrogen fixation regul 99.5 2.9E-14 9.8E-19 131.5 12.8 111 130-242 16-130 (130)
281 3vol_A Aerotaxis transducer AE 99.5 2.3E-14 7.8E-19 147.7 12.4 129 121-259 13-153 (233)
282 2v0u_A NPH1-1, LOV2; kinase, t 99.5 4.2E-14 1.4E-18 129.4 11.6 116 132-247 4-122 (146)
283 3ewk_A Sensor protein; PAS dom 99.5 1E-13 3.6E-18 141.3 14.6 111 130-240 111-227 (227)
284 3h9w_A Diguanylate cyclase wit 99.5 6E-14 2E-18 126.1 9.7 111 139-249 2-114 (115)
285 3mjq_A Uncharacterized protein 99.5 5.6E-14 1.9E-18 126.8 9.2 121 133-256 2-122 (126)
286 3olo_A Two-component sensor hi 99.5 3.8E-13 1.3E-17 119.9 14.0 107 129-242 12-118 (118)
287 3icy_A Sensor protein; sensory 99.5 6.5E-14 2.2E-18 125.0 8.8 115 128-242 2-118 (118)
288 2qkp_A Uncharacterized protein 99.5 5.8E-14 2E-18 134.8 9.0 121 127-251 16-140 (151)
289 2kdk_A ARYL hydrocarbon recept 99.4 1.5E-13 5.3E-18 124.0 8.6 110 135-244 8-119 (121)
290 3eeh_A Putative light and redo 99.4 3E-13 1E-17 120.4 10.3 116 126-242 7-125 (125)
291 1v9y_A Heme PAS sensor protein 99.4 3.5E-13 1.2E-17 127.8 11.3 124 129-254 39-166 (167)
292 3mfx_A Sensory BOX/ggdef famil 99.4 4.1E-13 1.4E-17 125.2 11.5 111 130-243 7-124 (129)
293 1byw_A Protein (human ERG pota 99.4 1.4E-12 4.9E-17 112.7 13.6 104 141-244 2-110 (110)
294 2l0w_A Potassium voltage-gated 99.4 9.2E-13 3.1E-17 119.4 12.8 113 132-244 21-138 (138)
295 3d72_A Vivid PAS protein VVD; 99.4 1.2E-12 4E-17 122.8 12.7 105 135-240 31-149 (149)
296 3bwl_A Sensor protein; structu 99.4 2.8E-12 9.4E-17 116.6 12.6 110 128-242 15-126 (126)
297 3b33_A Sensor protein; structu 99.4 2E-12 6.8E-17 115.7 11.5 108 130-242 7-115 (115)
298 4hi4_A Aerotaxis transducer AE 99.4 1.6E-12 5.6E-17 118.6 10.8 105 130-244 5-121 (121)
299 3fg8_A Uncharacterized protein 99.3 1E-12 3.4E-17 119.3 5.4 107 130-244 12-118 (118)
300 3fc7_A HTR-like protein, senso 99.3 9.8E-13 3.3E-17 118.7 5.3 108 128-242 17-125 (125)
301 4eho_A Bacteriophytochrome, PA 99.3 3.4E-13 1.2E-17 158.9 1.2 116 132-248 520-635 (635)
302 3cax_A Uncharacterized protein 99.2 1.5E-11 5.2E-16 135.4 9.5 119 126-250 235-353 (369)
303 3a0r_A Sensor protein; four he 99.2 9.2E-13 3.1E-17 142.8 -0.7 145 129-287 7-152 (349)
304 2vlg_A Sporulation kinase A; h 99.2 2.5E-11 8.6E-16 110.0 8.6 92 134-229 3-95 (111)
305 3tm0_A Aminoglycoside 3'-phosp 99.2 3E-11 1E-15 125.8 9.9 142 504-654 13-212 (263)
306 4f3l_A Mclock, circadian locom 99.2 4E-11 1.4E-15 131.7 10.7 109 140-248 251-360 (361)
307 1ll8_A PAS kinase; PAS domain, 99.1 1.6E-11 5.6E-16 109.9 2.8 101 139-242 7-113 (114)
308 1nwz_A PYP, photoactive yellow 99.1 9.4E-10 3.2E-14 101.1 13.5 101 133-235 20-121 (125)
309 4f3l_B BMAL1B; BHLH, PAS, circ 99.1 1.9E-10 6.6E-15 127.3 10.0 108 139-246 277-386 (387)
310 3a0s_A Sensor protein; PAS-fol 99.1 8.4E-10 2.9E-14 92.7 11.5 95 139-240 1-96 (96)
311 1mzu_A PPR; photoactive yellow 99.1 1.2E-09 4.2E-14 100.5 13.0 101 133-235 25-126 (129)
312 2w0n_A Sensor protein DCUS; si 99.0 3.3E-11 1.1E-15 107.0 1.6 106 125-242 10-118 (118)
313 1nd4_A Aminoglycoside 3'-phosp 99.0 2.7E-10 9.1E-15 117.8 8.5 138 504-655 19-214 (264)
314 2jhe_A Transcription regulator 99.0 1.9E-10 6.6E-15 113.2 6.2 105 129-245 79-189 (190)
315 3dxp_A Putative acyl-COA dehyd 99.0 1.2E-09 4E-14 119.4 10.1 146 507-657 40-250 (359)
316 3sg8_A APH(2'')-ID; antibiotic 98.9 2.7E-09 9.3E-14 113.8 8.6 185 510-706 25-287 (304)
317 3rty_A Period circadian protei 98.7 4.6E-08 1.6E-12 105.9 11.7 105 140-244 154-264 (339)
318 3r70_A Aminoglycoside phosphot 98.7 1.5E-07 5.1E-12 101.1 14.9 182 506-702 38-294 (320)
319 2ykf_A Pdtas, probable sensor 98.1 3.4E-09 1.2E-13 113.4 0.0 112 135-253 175-295 (305)
320 4dj3_A Period circadian protei 98.5 5.7E-07 1.9E-11 96.4 12.2 102 141-242 175-280 (317)
321 3gdi_A Period circadian protei 98.5 8.9E-07 3E-11 94.6 13.0 102 142-243 167-271 (309)
322 4dj2_A Period circadian protei 98.4 7.3E-07 2.5E-11 95.7 10.7 104 140-243 176-282 (320)
323 3tdw_A Gentamicin resistance p 98.4 3E-06 1E-10 90.4 14.4 136 510-656 24-225 (306)
324 4gkh_A Aminoglycoside 3'-phosp 98.3 4.1E-06 1.4E-10 87.0 12.6 133 513-655 32-223 (272)
325 3ovc_A Hygromycin-B 4-O-kinase 98.2 4.2E-06 1.4E-10 91.6 11.4 77 506-590 42-121 (362)
326 3d1u_A Putative fructosamine-3 98.1 1.1E-05 3.9E-10 85.2 11.6 79 506-590 16-97 (288)
327 3ats_A Putative uncharacterize 98.1 4.4E-06 1.5E-10 90.7 7.9 82 508-591 23-121 (357)
328 4f3l_A Mclock, circadian locom 98.0 4.5E-05 1.5E-09 83.3 13.1 64 128-191 84-147 (361)
329 2q83_A YTAA protein; 2635576, 97.9 7.9E-05 2.7E-09 79.7 13.4 138 510-654 37-251 (346)
330 2olc_A MTR kinase, methylthior 97.9 3.8E-05 1.3E-09 84.7 10.4 78 509-588 34-120 (397)
331 4f3l_B BMAL1B; BHLH, PAS, circ 97.7 6.9E-05 2.4E-09 82.6 10.0 60 129-188 85-145 (387)
332 3jr1_A Putative fructosamine-3 97.6 0.00028 9.6E-09 75.3 11.8 77 508-590 39-118 (312)
333 3rty_A Period circadian protei 97.6 0.00016 5.6E-09 78.0 9.2 97 143-243 6-140 (339)
334 2pyw_A Uncharacterized protein 97.5 0.00034 1.2E-08 77.7 10.6 76 626-702 233-312 (420)
335 2yle_A Protein spire homolog 1 97.4 0.0011 3.6E-08 66.4 12.6 139 588-761 33-197 (229)
336 3f7w_A Putative fructosamine-3 97.2 0.0012 4E-08 69.2 10.7 80 504-589 14-96 (288)
337 1oj5_A Steroid receptor coacti 97.2 0.00066 2.2E-08 62.1 7.0 81 146-227 13-97 (132)
338 3dxq_A Choline/ethanolamine ki 97.2 0.001 3.4E-08 70.3 9.6 71 510-590 23-95 (301)
339 3csv_A Aminoglycoside phosphot 97.1 0.0014 4.9E-08 70.1 9.6 33 626-658 184-220 (333)
340 2ppq_A HSK, HK, homoserine kin 97.0 0.0015 5.1E-08 69.4 9.1 143 508-655 25-217 (322)
341 1nw1_A Choline kinase (49.2 KD 96.8 0.0025 8.6E-08 71.0 8.9 72 509-588 77-157 (429)
342 1zyl_A Hypothetical protein YI 96.8 0.0086 3E-07 63.6 12.8 75 511-589 32-113 (328)
343 4dj2_A Period circadian protei 96.5 0.0009 3.1E-08 71.6 2.9 65 123-187 14-84 (320)
344 3feg_A Choline/ethanolamine ki 96.5 0.0059 2E-07 66.8 9.2 142 506-655 52-254 (379)
345 2qg7_A Ethanolamine kinase PV0 96.4 0.0052 1.8E-07 69.0 8.0 74 509-589 112-187 (458)
346 3i1a_A Spectinomycin phosphotr 96.3 0.017 5.8E-07 62.1 11.2 32 626-657 207-238 (339)
347 3c5i_A Choline kinase; choline 96.3 0.0034 1.2E-07 68.2 5.7 73 510-589 38-120 (369)
348 4dj3_A Period circadian protei 96.2 0.0014 4.7E-08 70.0 1.9 53 135-187 31-84 (317)
349 3gdi_A Period circadian protei 95.7 0.0029 9.9E-08 67.3 1.7 55 133-187 18-73 (309)
350 3f2s_A CK, chetk-alpha, cholin 95.3 0.048 1.6E-06 60.0 9.8 145 505-654 53-279 (401)
351 3mes_A Choline kinase; malaria 93.2 0.13 4.6E-06 56.9 7.6 74 509-589 74-156 (424)
352 3g15_A CK, chetk-alpha, cholin 91.1 0.11 3.7E-06 57.1 3.5 29 627-655 246-280 (401)
353 2ool_A Sensor protein; bacteri 90.6 0.31 1E-05 52.1 6.3 75 143-221 45-124 (337)
354 4dah_A Sporulation kinase D; a 90.5 2 6.8E-05 42.0 11.9 95 131-247 59-155 (217)
355 1p0z_A Sensor kinase CITA; tra 84.8 7.7 0.00026 34.8 11.2 86 132-243 41-127 (131)
356 4ann_A ESSB; membrane protein, 79.8 2.9 9.8E-05 41.5 6.5 117 560-707 42-158 (215)
357 3by8_A Sensor protein DCUS; hi 79.7 8.4 0.00029 35.1 9.4 90 130-246 45-135 (142)
358 3cxl_A N-chimerin; SH2, RHO-GA 79.0 0.15 5.2E-06 57.1 -3.4 62 508-572 145-213 (463)
359 3lif_A Putative diguanylate cy 78.7 19 0.00066 35.5 12.7 95 130-246 58-156 (254)
360 4e04_A Bacteriophytochrome (li 75.5 5.8 0.0002 41.9 7.7 54 142-199 31-84 (327)
361 4ew7_A Conjugative transfer: r 70.5 34 0.0012 29.4 9.6 88 132-226 22-112 (127)
362 4ano_A ESSB; membrane protein, 66.9 5.7 0.00019 39.5 5.0 115 561-707 48-163 (219)
363 2w1r_A Spovt, stage V sporulat 65.4 50 0.0017 29.2 10.7 88 130-239 6-97 (123)
364 1dip_A Delta-sleep-inducing pe 63.0 22 0.00074 28.5 6.5 33 4-36 13-45 (78)
365 3ra3_B P2F; coiled coil domain 62.4 2.9 0.0001 25.9 1.2 20 14-33 1-20 (28)
366 2ykf_A Pdtas, probable sensor 64.6 1.8 6.3E-05 45.4 0.0 68 166-246 68-140 (305)
367 3c8c_A Methyl-accepting chemot 58.4 44 0.0015 32.0 9.9 53 191-245 95-148 (240)
368 4fpp_A Phosphotransferase; fou 53.8 3 0.0001 42.0 0.3 65 212-287 2-66 (247)
369 1cja_A Protein (actin-fragmin 53.8 78 0.0027 33.4 11.1 140 507-655 71-237 (342)
370 3s7o_A Bacteriophytochrome; bi 48.1 9.9 0.00034 40.4 3.2 40 142-181 54-94 (343)
371 2x6h_A GH13170P, VPS34, phosph 47.0 79 0.0027 36.8 10.8 33 616-654 543-575 (696)
372 2gsv_A Hypothetical protein YV 46.3 13 0.00045 29.1 2.7 26 8-33 49-74 (80)
373 3e4o_A C4-dicarboxylate transp 46.2 1.1E+02 0.0038 31.5 11.1 86 141-247 114-199 (305)
374 1deb_A APC protein, adenomatou 42.1 27 0.00091 25.8 3.6 25 6-30 3-27 (54)
375 2wq1_A General control protein 40.7 23 0.0008 23.6 2.9 23 6-28 7-29 (33)
376 3zq5_A Phytochrome-like protei 36.9 16 0.00056 41.0 2.9 41 143-183 32-73 (520)
377 3ls8_A Phosphatidylinositol 3- 36.7 1.6E+02 0.0055 33.7 11.0 44 605-654 456-501 (614)
378 3lid_A Putative sensory BOX/gg 36.3 16 0.00055 37.7 2.6 103 130-245 67-178 (295)
379 3pxp_A Helix-turn-helix domain 34.3 26 0.00089 36.3 3.7 35 130-164 99-133 (292)
380 3nhq_A Bacteriophytochrome; ph 33.9 31 0.0011 38.6 4.5 72 142-220 28-100 (505)
381 3nmd_A CGMP dependent protein 31.6 37 0.0013 27.3 3.3 26 8-33 42-67 (72)
382 3vmx_A Voltage-gated hydrogen 31.3 33 0.0011 25.2 2.7 25 9-33 14-38 (48)
383 3cwf_A Alkaline phosphatase sy 30.5 2E+02 0.0067 24.6 8.6 78 131-243 39-116 (122)
384 3twe_A Alpha4H; unknown functi 28.0 80 0.0027 19.4 3.5 21 7-27 2-22 (27)
385 1kd8_A GABH AIV, GCN4 acid bas 26.5 22 0.00076 24.2 1.0 23 7-29 9-31 (36)
386 3m48_A General control protein 25.4 30 0.001 23.2 1.4 25 5-29 6-30 (33)
387 3a2a_A Voltage-gated hydrogen 24.4 53 0.0018 24.7 2.8 25 9-33 21-45 (58)
388 1uo4_A General control protein 24.1 27 0.00091 23.6 1.0 24 6-29 8-31 (34)
389 2jn6_A Protein CGL2762, transp 23.7 28 0.00097 29.1 1.5 29 8-36 61-89 (97)
390 1kd8_B GABH BLL, GCN4 acid bas 23.0 69 0.0023 21.9 2.9 23 7-29 9-31 (36)
391 4g3b_A Alpha4F3D; alpha helix, 23.0 65 0.0022 19.6 2.4 19 14-32 6-24 (26)
392 3c3g_A Alpha/beta peptide with 22.5 18 0.0006 24.2 -0.1 23 6-28 7-29 (33)
393 2bni_A General control protein 21.9 26 0.00089 23.6 0.6 22 6-27 8-29 (34)
394 3c3f_A Alpha/beta peptide with 21.4 19 0.00065 24.2 -0.1 23 6-28 8-30 (34)
395 3eps_A Isocitrate dehydrogenas 21.2 2.8E+02 0.0095 31.1 9.0 138 512-658 313-484 (578)
396 3by9_A Sensor protein; histidi 21.1 3.2E+02 0.011 26.1 9.2 84 141-245 73-156 (260)
397 3oja_A Leucine-rich immune mol 21.0 8.6 0.0003 42.8 -3.1 29 547-575 323-351 (487)
398 3he4_B Synzip5; heterodimeric 20.5 74 0.0025 21.9 2.7 20 8-27 5-24 (46)
No 1
>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...
Probab=100.00 E-value=1.5e-55 Score=473.85 Aligned_cols=263 Identities=22% Similarity=0.384 Sum_probs=233.4
Q ss_pred ccceeEeeeeccCCcEEEEEEEEeC-CceEEEEEEecccCC-HHHHHHHHHHHHHHHhCCCCceeeEeceeecCCceEEE
Q 003963 504 WEDLTIGEQIGQGSCGTVYHAVWYG-SQDVAVKVFSRQEYS-DEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIV 581 (783)
Q Consensus 504 ~~~y~i~~~LG~G~fG~Vy~a~~~~-~~~vAiK~i~~~~~~-~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lV 581 (783)
.++|+++++||+|+||+||+|.+.. ++.||||++.+.... ....+.+.+|+.+|+.|+|||||+++++|++++.+|||
T Consensus 31 ~~dy~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~yiv 110 (311)
T 4aw0_A 31 PEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFG 110 (311)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred ccccEEEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEE
Confidence 3689999999999999999999865 567999999865432 23356789999999999999999999999999999999
Q ss_pred EEecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCcccccc--
Q 003963 582 TEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHET-- 659 (783)
Q Consensus 582 ~E~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~~~-- 659 (783)
||||+||+|.+++.+. ..+++..+..++.||+.||+|||+++ ||||||||+||||+.++.|||+|||+|+.....
T Consensus 111 mEy~~gG~L~~~i~~~-~~l~e~~~~~~~~qi~~al~ylH~~~--IiHRDlKPeNILl~~~g~vKl~DFGla~~~~~~~~ 187 (311)
T 4aw0_A 111 LSYAKNGELLKYIRKI-GSFDETCTRFYTAEIVSALEYLHGKG--IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESK 187 (311)
T ss_dssp ECCCTTEEHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHHTT--EECSCCSGGGEEECTTSCEEECCCTTCEECCTTTT
T ss_pred EecCCCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCC--CccCCCCHHHeEEcCCCCEEEEEcCCceecCCCCC
Confidence 9999999999999764 46999999999999999999999999 999999999999999999999999999876432
Q ss_pred cccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhcccccccCCCCCCHHHHHHH
Q 003963 660 YLTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAAIV 739 (783)
Q Consensus 660 ~~~~~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~l~~LI 739 (783)
.....+.+||+.|||||++.+..++.++|||||||+||+|++|++||...+..+.+..+. ...+.+|..+++++++||
T Consensus 188 ~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~i~--~~~~~~p~~~s~~~~dli 265 (311)
T 4aw0_A 188 QARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEGLIFAKII--KLEYDFPEKFFPKARDLV 265 (311)
T ss_dssp CCCBCCCCSCGGGCCHHHHHHSCBCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHH--HTCCCCCTTCCHHHHHHH
T ss_pred cccccCcccCcccCCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH--cCCCCCCcccCHHHHHHH
Confidence 223456789999999999999999999999999999999999999999988888877764 345677889999999999
Q ss_pred HHhhhhCCCCCCCHHHHHHHHHHHHHHHhhcC
Q 003963 740 ESCWHSDPQCRPSFQELVDKLRDLQRQYFQAS 771 (783)
Q Consensus 740 ~~cL~~dP~~RPsa~ell~~L~~L~~~~f~~~ 771 (783)
.+||.+||.+|||+.|++..-.=++|+||+.+
T Consensus 266 ~~lL~~dp~~R~t~~e~~~~~~i~~Hp~F~~i 297 (311)
T 4aw0_A 266 EKLLVLDATKRLGCEEMEGYGPLKAHPFFESV 297 (311)
T ss_dssp HHHSCSSGGGSTTSGGGTCHHHHHTSGGGTTC
T ss_pred HHHccCCHhHCcChHHHcCCHHHHCCCCcCCC
Confidence 99999999999999998766555789999875
No 2
>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*
Probab=100.00 E-value=5.8e-55 Score=476.66 Aligned_cols=259 Identities=23% Similarity=0.409 Sum_probs=226.5
Q ss_pred ccceeEeeeeccCCcEEEEEEEEeC-CceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEeceeecCCceEEEE
Q 003963 504 WEDLTIGEQIGQGSCGTVYHAVWYG-SQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIVT 582 (783)
Q Consensus 504 ~~~y~i~~~LG~G~fG~Vy~a~~~~-~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lV~ 582 (783)
.++|+++++||+|+||.||+|.+.. ++.||||++..........+.+.+|+.+|+.|+|||||++++++++++.+||||
T Consensus 23 me~Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~yiVm 102 (350)
T 4b9d_A 23 MEKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEENGSLYIVM 102 (350)
T ss_dssp CCCEEEEEEC------CEEEEEETTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred ccceEEeEEEecCCCeEEEEEEECCCCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEE
Confidence 4799999999999999999999865 578999999988777777889999999999999999999999999999999999
Q ss_pred EecCCCCHHHHHhhc-CCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCcccccccc
Q 003963 583 EFLPRGSLFRLLQRN-TTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETYL 661 (783)
Q Consensus 583 E~~~ggsL~~~L~~~-~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~~ 661 (783)
|||+||+|.++|... ...+++..++.++.||+.||+|||++| ||||||||+||||+.+|.|||+|||+|+.......
T Consensus 103 Ey~~gg~L~~~i~~~~~~~~~e~~~~~~~~qi~~aL~ylH~~~--IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~~ 180 (350)
T 4b9d_A 103 DYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHDRK--ILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTVE 180 (350)
T ss_dssp ECCTTCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTT--CEETTCCGGGEEECTTCCEEECSTTEESCCCHHHH
T ss_pred eCCCCCcHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHHHCC--eeeccCCHHHEEECCCCCEEEcccccceeecCCcc
Confidence 999999999999754 345789999999999999999999999 99999999999999999999999999987665433
Q ss_pred cccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhcccccccCCCCCCHHHHHHHHH
Q 003963 662 TTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAAIVES 741 (783)
Q Consensus 662 ~~~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~l~~LI~~ 741 (783)
...+.+||+.|||||++.+..++.++|||||||+||||++|++||...+..+.+..+... ...+++..+++++.+||.+
T Consensus 181 ~~~~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~~~~~~i~~~-~~~~~~~~~s~~~~~li~~ 259 (350)
T 4b9d_A 181 LARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGSMKNLVLKIISG-SFPPVSLHYSYDLRSLVSQ 259 (350)
T ss_dssp HHHHHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHT-CCCCCCTTSCHHHHHHHHH
T ss_pred cccccCCCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHcC-CCCCCCccCCHHHHHHHHH
Confidence 344567999999999999999999999999999999999999999999888877776432 2345677899999999999
Q ss_pred hhhhCCCCCCCHHHHHHHHHHHHHHHhhcC
Q 003963 742 CWHSDPQCRPSFQELVDKLRDLQRQYFQAS 771 (783)
Q Consensus 742 cL~~dP~~RPsa~ell~~L~~L~~~~f~~~ 771 (783)
||++||.+|||+.++ |+|+||+..
T Consensus 260 ~L~~dP~~R~s~~e~------l~hp~~~~~ 283 (350)
T 4b9d_A 260 LFKRNPRDRPSVNSI------LEKGFIAKR 283 (350)
T ss_dssp HTCSSGGGSCCHHHH------HTSHHHHTT
T ss_pred HccCChhHCcCHHHH------hcCHHhhcC
Confidence 999999999999999 678888653
No 3
>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}
Probab=100.00 E-value=3.6e-54 Score=463.53 Aligned_cols=268 Identities=35% Similarity=0.579 Sum_probs=227.7
Q ss_pred ccccccccceeEeeeeccCCcEEEEEEEEeCCceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEeceeecCCc
Q 003963 498 LDYEILWEDLTIGEQIGQGSCGTVYHAVWYGSQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQR 577 (783)
Q Consensus 498 ~~~e~~~~~y~i~~~LG~G~fG~Vy~a~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~ 577 (783)
..||+..++|++.++||+|+||+||+|.+. ..||||+++......+..+.|.+|+.+|+.++|||||++++++.. +.
T Consensus 29 ~~Wei~~~~l~l~~~iG~G~fG~Vy~~~~~--~~vAvK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~-~~ 105 (307)
T 3omv_A 29 YYWEIEASEVMLSTRIGSGSFGTVYKGKWH--GDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK-DN 105 (307)
T ss_dssp CCCBCCTTSCCEEEECCCCSSSEEEEEESS--SEEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SS
T ss_pred cCcEEcHHHeEEeeEEeeCCCcEEEEEEEC--CcEEEEEEEecCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEC-Ce
Confidence 457888999999999999999999999864 369999998777777778899999999999999999999998864 56
Q ss_pred eEEEEEecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCcccc
Q 003963 578 LCIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKH 657 (783)
Q Consensus 578 ~~lV~E~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~ 657 (783)
+|||||||++|+|.++|.....++++..++.|+.||+.||+|||+++ ||||||||+||||+.++.+||+|||+|+...
T Consensus 106 ~~iVmEy~~gGsL~~~l~~~~~~l~~~~~~~i~~qia~gL~yLH~~~--IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~ 183 (307)
T 3omv_A 106 LAIVTQWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLHAKN--IIHRDMKSNNIFLHEGLTVKIGDFGLATVKS 183 (307)
T ss_dssp CEEEEECCSSCBHHHHHHTSCCCCCHHHHHHHHHHHHHHHHHHHHTT--CBCSCCCSSSEEEETTEEEEECCCSSCBC--
T ss_pred EEEEEEcCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCC--ccCCccCHHHEEECCCCcEEEeeccCceecc
Confidence 89999999999999999877778999999999999999999999998 9999999999999999999999999998654
Q ss_pred cc--cccccCCCCCCcccCcccccC---CCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccc-c---cccCC
Q 003963 658 ET--YLTTKTGKGTPQWMAPEVLRN---EPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMN-Q---RLEIP 728 (783)
Q Consensus 658 ~~--~~~~~~~~Gt~~Y~aPE~~~~---~~~s~~sDIwSLG~il~elltG~~Pf~~~~~~~~~~~i~~~~-~---~~~~~ 728 (783)
.. .......+||+.|||||++.+ ..++.++|||||||+||||+||+.||.+.+....+..+.... . ...++
T Consensus 184 ~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~~~~~~~~~~~~~~~~~~p~~~~~~ 263 (307)
T 3omv_A 184 RWSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQIIFMVGRGYASPDLSKLY 263 (307)
T ss_dssp ----------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHHTTCCCCCSTTSC
T ss_pred cCCcceeecccccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCCCCCCChHHHHHHHHhcCCCCCCccccc
Confidence 32 223345689999999999864 358999999999999999999999998876654443332221 1 23456
Q ss_pred CCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhc
Q 003963 729 KDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQA 770 (783)
Q Consensus 729 ~~~s~~l~~LI~~cL~~dP~~RPsa~ell~~L~~L~~~~f~~ 770 (783)
..+++++.+||.+||+.||.+|||+.+|++.|+.|+|++.+-
T Consensus 264 ~~~~~~l~~li~~cl~~dP~~RPs~~ei~~~Le~l~~~lpk~ 305 (307)
T 3omv_A 264 KNCPKAMKRLVADCVKKVKEERPLFPQILSSIELLQHSLPKI 305 (307)
T ss_dssp TTSCHHHHHHHHHHTCSSSTTSCCHHHHHHHHHHHHTTCCC-
T ss_pred ccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhccCCCC
Confidence 789999999999999999999999999999999999987553
No 4
>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*
Probab=100.00 E-value=7.4e-54 Score=467.22 Aligned_cols=257 Identities=26% Similarity=0.401 Sum_probs=227.9
Q ss_pred ccceeEeeeeccCCcEEEEEEEEeC-CceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEeceeecCCceEEEE
Q 003963 504 WEDLTIGEQIGQGSCGTVYHAVWYG-SQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIVT 582 (783)
Q Consensus 504 ~~~y~i~~~LG~G~fG~Vy~a~~~~-~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lV~ 582 (783)
.+.|+++++||+|+||.||+|.++. ++.||||++....... .+.+.+|+.+|+.++|||||+++++|.+++.+||||
T Consensus 73 ~~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~--~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~ivm 150 (346)
T 4fih_A 73 RSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQR--RELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVM 150 (346)
T ss_dssp GGTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCSS--GGGGHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred hHhcEEeEEeecCcCeEEEEEEECCCCCEEEEEEEecCchhH--HHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEE
Confidence 4679999999999999999999865 5779999997654332 346789999999999999999999999999999999
Q ss_pred EecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCccccccccc
Q 003963 583 EFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETYLT 662 (783)
Q Consensus 583 E~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~~~ 662 (783)
|||+||+|.+++.+. ++++..+..++.||+.||+|||+++ ||||||||+||||+.+|.|||+|||+|+........
T Consensus 151 Ey~~gg~L~~~l~~~--~l~e~~~~~~~~qi~~aL~ylH~~~--IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~~~ 226 (346)
T 4fih_A 151 EFLEGGALTDIVTHT--RMNEEQIAAVCLAVLQALSVLHAQG--VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPR 226 (346)
T ss_dssp CCCTTEEHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHHHTT--EECCCCSGGGEEECTTCCEEECCCTTCEECCSSSCC
T ss_pred eCCCCCcHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCC--cccccCCHHHEEECCCCCEEEecCcCceecCCCCCc
Confidence 999999999999763 5999999999999999999999999 999999999999999999999999999877655555
Q ss_pred ccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccc-ccccCCCCCCHHHHHHHHH
Q 003963 663 TKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMN-QRLEIPKDVDPRWAAIVES 741 (783)
Q Consensus 663 ~~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~elltG~~Pf~~~~~~~~~~~i~~~~-~~~~~~~~~s~~l~~LI~~ 741 (783)
..+.+||+.|||||++.+..|+.++|||||||+||||++|++||.+.+..+.+..+.... .....+..+++++++||.+
T Consensus 227 ~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~ 306 (346)
T 4fih_A 227 RKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRLKNLHKVSPSLKGFLDR 306 (346)
T ss_dssp BCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSSCCCCSCGGGSCHHHHHHHHH
T ss_pred ccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHcCCCCCCCccccCCHHHHHHHHH
Confidence 567899999999999999999999999999999999999999999988888776664322 2334456789999999999
Q ss_pred hhhhCCCCCCCHHHHHHHHHHHHHHHhhcCc
Q 003963 742 CWHSDPQCRPSFQELVDKLRDLQRQYFQASR 772 (783)
Q Consensus 742 cL~~dP~~RPsa~ell~~L~~L~~~~f~~~~ 772 (783)
||.+||.+|||+.|+ |+|+||+...
T Consensus 307 ~L~~dP~~R~ta~e~------l~Hp~~~~~~ 331 (346)
T 4fih_A 307 LLVRDPAQRATAAEL------LKHPFLAKAG 331 (346)
T ss_dssp HSCSSTTTSCCHHHH------TTCGGGGGCC
T ss_pred HcCCChhHCcCHHHH------hcCHhhcCCC
Confidence 999999999999999 7899998643
No 5
>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}
Probab=100.00 E-value=9.3e-53 Score=457.81 Aligned_cols=260 Identities=32% Similarity=0.567 Sum_probs=223.3
Q ss_pred cccccceeEeeeeccCCcEEEEEEEEeC------CceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEeceeec
Q 003963 501 EILWEDLTIGEQIGQGSCGTVYHAVWYG------SQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTS 574 (783)
Q Consensus 501 e~~~~~y~i~~~LG~G~fG~Vy~a~~~~------~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~ 574 (783)
++..++|.+.++||+|+||.||+|.+++ +..||||+++.. .....+.|.+|+.+|+.|+|||||+++++|.+
T Consensus 37 ~i~~~d~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~--~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~ 114 (329)
T 4aoj_A 37 HIKRRDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEA--SESARQDFQREAELLTMLQHQHIVRFFGVCTE 114 (329)
T ss_dssp BCCGGGEEEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCC--SHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS
T ss_pred ccCHHHeEEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcC--CHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEE
Confidence 4556799999999999999999998742 467999999653 45566789999999999999999999999999
Q ss_pred CCceEEEEEecCCCCHHHHHhhcC--------------CcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEc
Q 003963 575 PQRLCIVTEFLPRGSLFRLLQRNT--------------TKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVD 640 (783)
Q Consensus 575 ~~~~~lV~E~~~ggsL~~~L~~~~--------------~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~ 640 (783)
.+.+|||||||++|+|.++|.... .++++..++.|+.||+.||+|||+++ ||||||||+||||+
T Consensus 115 ~~~~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~--iiHRDLKp~NILl~ 192 (329)
T 4aoj_A 115 GRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLH--FVHRDLATRNCLVG 192 (329)
T ss_dssp SSSEEEEEECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCCGGGEEEE
T ss_pred CCEEEEEEEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHhcCC--eecccccHhhEEEC
Confidence 999999999999999999997532 35899999999999999999999998 99999999999999
Q ss_pred CCCcEEEEecCCCcccccc--cccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCChHHHHHH
Q 003963 641 KHWTVKVGDFGLSRLKHET--YLTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELAT-EKIPWDNLNSMQVIGA 717 (783)
Q Consensus 641 ~~~~vkL~DFGla~~~~~~--~~~~~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~ellt-G~~Pf~~~~~~~~~~~ 717 (783)
.++.+||+|||+++..... .......+||+.|||||++.+..++.++|||||||+||||+| |+.||...+..+.+..
T Consensus 193 ~~~~~Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~~sDvwS~Gvvl~Ellt~G~~Pf~~~~~~~~~~~ 272 (329)
T 4aoj_A 193 QGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAIDC 272 (329)
T ss_dssp TTTEEEECCCC----------------CCCCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSSCHHHHHHH
T ss_pred CCCcEEEcccccceeccCCCcceecCcccccccccChhhhcCCCCCccccccchHHHHHHHHcCCCCCCCCCCHHHHHHH
Confidence 9999999999999865432 222334579999999999999999999999999999999999 8999999988887776
Q ss_pred hhcccccccCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHH
Q 003963 718 VGFMNQRLEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQR 765 (783)
Q Consensus 718 i~~~~~~~~~~~~~s~~l~~LI~~cL~~dP~~RPsa~ell~~L~~L~~ 765 (783)
+.. ..+++.|..+++++.+||.+||+.||++|||+.+|+++|+.+.+
T Consensus 273 i~~-g~~~~~p~~~~~~~~~li~~cl~~dP~~RPs~~ei~~~L~~l~~ 319 (329)
T 4aoj_A 273 ITQ-GRELERPRACPPEVYAIMRGCWQREPQQRHSIKDVHARLQALAQ 319 (329)
T ss_dssp HHH-TCCCCCCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHHHHHHHHH
T ss_pred HHc-CCCCCCcccccHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHhh
Confidence 643 34677888999999999999999999999999999999988764
No 6
>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=3.8e-53 Score=448.62 Aligned_cols=256 Identities=29% Similarity=0.502 Sum_probs=211.7
Q ss_pred ccceeEeeeeccCCcEEEEEEEEeC-CceEEEEEEecccCCH-HHHHHHHHHHHHHHhCCCCceeeEeceeecCCceEEE
Q 003963 504 WEDLTIGEQIGQGSCGTVYHAVWYG-SQDVAVKVFSRQEYSD-EVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIV 581 (783)
Q Consensus 504 ~~~y~i~~~LG~G~fG~Vy~a~~~~-~~~vAiK~i~~~~~~~-~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lV 581 (783)
.++|++.+.||+|+||.||+|.+.. ++.||||++.+..... .....+.+|+.+|+.++|||||++++++++++.+|+|
T Consensus 12 ig~Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~iv 91 (275)
T 3hyh_A 12 IGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMV 91 (275)
T ss_dssp --CCEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred eeCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEE
Confidence 3689999999999999999999854 5789999998765433 3456789999999999999999999999999999999
Q ss_pred EEecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCcccccccc
Q 003963 582 TEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETYL 661 (783)
Q Consensus 582 ~E~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~~ 661 (783)
|||| +|+|.+++.+. .++++..+..++.||+.||+|||++| ||||||||+||||+.++.+||+|||+|+......
T Consensus 92 mEy~-~g~L~~~l~~~-~~l~e~~~~~~~~qi~~al~ylH~~~--IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~~~- 166 (275)
T 3hyh_A 92 IEYA-GNELFDYIVQR-DKMSEQEARRFFQQIISAVEYCHRHK--IVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGN- 166 (275)
T ss_dssp EECC-CEEHHHHHHHS-CSCCHHHHHHHHHHHHHHHHHHHHTT--CCCCCCCTTTEEECTTCCEEECCSSCC--------
T ss_pred EeCC-CCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCC--cccccCChHHeEECCCCCEEEeecCCCeecCCCC-
Confidence 9999 67999999764 46999999999999999999999999 9999999999999999999999999998655432
Q ss_pred cccCCCCCCcccCcccccCCCC-CchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhcccccccCCCCCCHHHHHHHH
Q 003963 662 TTKTGKGTPQWMAPEVLRNEPS-DEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAAIVE 740 (783)
Q Consensus 662 ~~~~~~Gt~~Y~aPE~~~~~~~-s~~sDIwSLG~il~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~l~~LI~ 740 (783)
...+.+||+.|||||++.+..+ +.++|||||||++|+|++|++||...+....+..+. ...+.+|..+++++++||.
T Consensus 167 ~~~~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~~~~~~~~~~i~--~~~~~~p~~~s~~~~~li~ 244 (275)
T 3hyh_A 167 FLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNIS--NGVYTLPKFLSPGAAGLIK 244 (275)
T ss_dssp --------CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHH--HTCCCCCTTSCHHHHHHHH
T ss_pred ccCCeeECcccCChhhhcCCCCCCChhhhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH--cCCCCCCCCCCHHHHHHHH
Confidence 3346789999999999998876 689999999999999999999999988877776663 3456778899999999999
Q ss_pred HhhhhCCCCCCCHHHHHHHHHHHHHHHhhcCc
Q 003963 741 SCWHSDPQCRPSFQELVDKLRDLQRQYFQASR 772 (783)
Q Consensus 741 ~cL~~dP~~RPsa~ell~~L~~L~~~~f~~~~ 772 (783)
+||++||.+|||+.|+ ++|+|||...
T Consensus 245 ~~L~~dP~~R~s~~ei------l~hpw~k~~~ 270 (275)
T 3hyh_A 245 RMLIVNPLNRISIHEI------MQDDWFKVDL 270 (275)
T ss_dssp HHSCSSGGGSCCHHHH------HHCHHHHTTC
T ss_pred HHccCChhHCcCHHHH------HcCcccccCC
Confidence 9999999999999999 6899998543
No 7
>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}
Probab=100.00 E-value=5e-53 Score=451.29 Aligned_cols=254 Identities=31% Similarity=0.525 Sum_probs=219.3
Q ss_pred eeEeeeeccCCcEEEEEEEEeC-CceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEeceeec----CCceEEE
Q 003963 507 LTIGEQIGQGSCGTVYHAVWYG-SQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTS----PQRLCIV 581 (783)
Q Consensus 507 y~i~~~LG~G~fG~Vy~a~~~~-~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~----~~~~~lV 581 (783)
|++.++||+|+||.||+|.+.. +..||+|++..........+.|.+|+.+|+.|+|||||+++++|+. ...+|||
T Consensus 28 ~~~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~lv 107 (290)
T 3fpq_A 28 LKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLV 107 (290)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEETTEEEEEEE
T ss_pred EEeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeeccCCCcEEEEE
Confidence 4788899999999999999865 4679999998887777777889999999999999999999999865 3568999
Q ss_pred EEecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcC-CCcEEEEecCCCccccccc
Q 003963 582 TEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDK-HWTVKVGDFGLSRLKHETY 660 (783)
Q Consensus 582 ~E~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~-~~~vkL~DFGla~~~~~~~ 660 (783)
||||+||+|.+++.+. ..+++..++.++.||+.||+|||+++.+||||||||+||||+. ++.+||+|||+|+.....
T Consensus 108 mEy~~gg~L~~~l~~~-~~l~~~~~~~~~~qi~~aL~ylH~~~~~IiHRDlKp~NILl~~~~g~vKl~DFGla~~~~~~- 185 (290)
T 3fpq_A 108 TELMTSGTLKTYLKRF-KVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRAS- 185 (290)
T ss_dssp EECCCSCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHTSSSCCCCCCCCGGGEEESSTTSCEEECCTTGGGGCCTT-
T ss_pred EeCCCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCCCEEecccChhheeEECCCCCEEEEeCcCCEeCCCC-
Confidence 9999999999999764 4699999999999999999999998777999999999999974 789999999999865433
Q ss_pred ccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCCh-HHHHHHhhcccccccCCCCCCHHHHHHH
Q 003963 661 LTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNS-MQVIGAVGFMNQRLEIPKDVDPRWAAIV 739 (783)
Q Consensus 661 ~~~~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~elltG~~Pf~~~~~-~~~~~~i~~~~~~~~~~~~~s~~l~~LI 739 (783)
...+.+||+.|||||++.+ .++.++|||||||+||||+||++||.+... ......+........++..+++++.+||
T Consensus 186 -~~~~~~GTp~YmAPE~~~~-~y~~~~DiwSlGvilyelltg~~Pf~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~li 263 (290)
T 3fpq_A 186 -FAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTSGVKPASFDKVAIPEVKEII 263 (290)
T ss_dssp -SBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHHHHHTTTCCCGGGGGCCCHHHHHHH
T ss_pred -ccCCcccCccccCHHHcCC-CCCcHHHHHHHHHHHHHHHHCCCCCCCCCcHHHHHHHHHcCCCCCCCCccCCHHHHHHH
Confidence 2346689999999999876 599999999999999999999999976554 4444444433334456677899999999
Q ss_pred HHhhhhCCCCCCCHHHHHHHHHHHHHHHhhc
Q 003963 740 ESCWHSDPQCRPSFQELVDKLRDLQRQYFQA 770 (783)
Q Consensus 740 ~~cL~~dP~~RPsa~ell~~L~~L~~~~f~~ 770 (783)
.+||.+||.+|||+.++ |+|+||+.
T Consensus 264 ~~~L~~dP~~R~s~~e~------l~Hp~~~~ 288 (290)
T 3fpq_A 264 EGCIRQNKDERYSIKDL------LNHAFFQE 288 (290)
T ss_dssp HHHSCSSGGGSCCHHHH------HTSGGGC-
T ss_pred HHHccCChhHCcCHHHH------hcCccccC
Confidence 99999999999999999 78999974
No 8
>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*
Probab=100.00 E-value=2.6e-54 Score=463.73 Aligned_cols=257 Identities=24% Similarity=0.398 Sum_probs=219.8
Q ss_pred ccceeEeeeeccCCcEEEEEEEEeC----CceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEeceeecCCceE
Q 003963 504 WEDLTIGEQIGQGSCGTVYHAVWYG----SQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLC 579 (783)
Q Consensus 504 ~~~y~i~~~LG~G~fG~Vy~a~~~~----~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~ 579 (783)
.++|++++.||+|+||+||+|++.. ++.||||++.+..........+.+|+.+|+.++|||||++++++++++.+|
T Consensus 23 p~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~ 102 (304)
T 3ubd_A 23 PSQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQTEGKLY 102 (304)
T ss_dssp GGGEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCCCCCTTEECEEEEEEETTEEE
T ss_pred ccccEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEE
Confidence 3689999999999999999998742 357999999765433222335778999999999999999999999999999
Q ss_pred EEEEecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCcccccc
Q 003963 580 IVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHET 659 (783)
Q Consensus 580 lV~E~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~~~ 659 (783)
||||||+||+|.+++.+. ..+++..+..++.||+.||+|||++| ||||||||+|||++.+|.+||+|||+|+.....
T Consensus 103 ivmEy~~gg~L~~~l~~~-~~l~e~~~~~~~~qi~~aL~ylH~~~--IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~ 179 (304)
T 3ubd_A 103 LILDFLRGGDLFTRLSKE-VMFTEEDVKFYLAELALALDHLHSLG--IIYRDLKPENILLDEEGHIKLTDFGLSKESIDH 179 (304)
T ss_dssp EEECCCTTCEEHHHHHHH-CCCCHHHHHHHHHHHHHHHHHHHHTT--CCCSSCCGGGEEECTTSCEEEESSEEEEC----
T ss_pred EEEEcCCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCC--CcCCCCCHHHeEEcCCCCEEecccccceeccCC
Confidence 999999999999999864 46999999999999999999999999 999999999999999999999999999866554
Q ss_pred cccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhcccccccCCCCCCHHHHHHH
Q 003963 660 YLTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAAIV 739 (783)
Q Consensus 660 ~~~~~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~l~~LI 739 (783)
.....+.+||+.|||||++.+..++.++|||||||+||||+||++||.+.+..+.+..+. ...+.+|..+|+++.+||
T Consensus 180 ~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~~~~~~i~--~~~~~~p~~~s~~~~~li 257 (304)
T 3ubd_A 180 EKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMIL--KAKLGMPQFLSPEAQSLL 257 (304)
T ss_dssp -CCCCSCCCCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHH--HCCCCCCTTSCHHHHHHH
T ss_pred CccccccccCcccCCHHHhccCCCCCCCcccchHHHHHHHHhCCCCCCCcCHHHHHHHHH--cCCCCCCCcCCHHHHHHH
Confidence 444557789999999999999999999999999999999999999999998888877764 345677889999999999
Q ss_pred HHhhhhCCCCCCCH-----HHHHHHHHHHHHHHhhcC
Q 003963 740 ESCWHSDPQCRPSF-----QELVDKLRDLQRQYFQAS 771 (783)
Q Consensus 740 ~~cL~~dP~~RPsa-----~ell~~L~~L~~~~f~~~ 771 (783)
.+||++||.+|||+ +|+ ++|+||+.+
T Consensus 258 ~~~L~~dP~~R~ta~~~~~~ei------l~Hp~f~~i 288 (304)
T 3ubd_A 258 RMLFKRNPANRLGAGPDGVEEI------KRHSFFSTI 288 (304)
T ss_dssp HHHTCSSGGGSTTCSTTTHHHH------HTSGGGTTC
T ss_pred HHHcccCHHHCCCCCcCCHHHH------HcCccccCC
Confidence 99999999999984 677 679999865
No 9
>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*
Probab=100.00 E-value=9.9e-53 Score=451.62 Aligned_cols=260 Identities=30% Similarity=0.542 Sum_probs=227.2
Q ss_pred cccccceeEeeeeccCCcEEEEEEEEeC------CceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEeceeec
Q 003963 501 EILWEDLTIGEQIGQGSCGTVYHAVWYG------SQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTS 574 (783)
Q Consensus 501 e~~~~~y~i~~~LG~G~fG~Vy~a~~~~------~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~ 574 (783)
++..++|.+.++||+|+||.||+|.+.. +..||||+++.. .....+.|.+|+.+|++|+|||||+++++|.+
T Consensus 9 ~I~r~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~--~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~ 86 (299)
T 4asz_A 9 HIKRHNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDA--SDNARKDFHREAELLTNLQHEHIVKFYGVCVE 86 (299)
T ss_dssp BCCGGGEEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSC--CHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS
T ss_pred ccCHHHeEEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCC--ChHHHHHHHHHHHHHHhCCCCCCccEEEEEee
Confidence 4566899999999999999999998742 456999999653 45566789999999999999999999999999
Q ss_pred CCceEEEEEecCCCCHHHHHhhcC------------CcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCC
Q 003963 575 PQRLCIVTEFLPRGSLFRLLQRNT------------TKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKH 642 (783)
Q Consensus 575 ~~~~~lV~E~~~ggsL~~~L~~~~------------~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~ 642 (783)
++.+|||||||++|+|.++|...+ ..+++..++.++.||+.||+|||+++ ||||||||+||||+.+
T Consensus 87 ~~~~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~--iiHRDlKp~NILl~~~ 164 (299)
T 4asz_A 87 GDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQH--FVHRDLATRNCLVGEN 164 (299)
T ss_dssp SSSEEEEEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCSGGGEEECGG
T ss_pred CCEEEEEEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCC--cccCccCHhhEEECCC
Confidence 999999999999999999997542 46899999999999999999999998 9999999999999999
Q ss_pred CcEEEEecCCCcccccccc--cccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCChHHHHHHhh
Q 003963 643 WTVKVGDFGLSRLKHETYL--TTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELAT-EKIPWDNLNSMQVIGAVG 719 (783)
Q Consensus 643 ~~vkL~DFGla~~~~~~~~--~~~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~ellt-G~~Pf~~~~~~~~~~~i~ 719 (783)
+.+||+|||+|+....... ......||+.|||||++.+..++.++|||||||+||||+| |+.||...+..+....+.
T Consensus 165 ~~~Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~k~DVwS~Gvvl~Ellt~G~~Pf~~~~~~~~~~~i~ 244 (299)
T 4asz_A 165 LLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEVIECIT 244 (299)
T ss_dssp GCEEECCCSCHHHHTGGGCEEETTTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHH
T ss_pred CcEEECCcccceecCCCCceeecCceecChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHH
Confidence 9999999999986543322 2223468999999999999999999999999999999999 999999999888877764
Q ss_pred cccccccCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHH
Q 003963 720 FMNQRLEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQR 765 (783)
Q Consensus 720 ~~~~~~~~~~~~s~~l~~LI~~cL~~dP~~RPsa~ell~~L~~L~~ 765 (783)
. ...++.|..+|+++.+||.+||+.||++|||+.+|+..|+++..
T Consensus 245 ~-~~~~~~p~~~~~~~~~li~~cl~~dP~~RPs~~~i~~~L~~~~~ 289 (299)
T 4asz_A 245 Q-GRVLQRPRTCPQEVYELMLGCWQREPHMRKNIKGIHTLLQNLAK 289 (299)
T ss_dssp H-TCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred c-CCCCCCCccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHh
Confidence 3 34567888999999999999999999999999999998887654
No 10
>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}
Probab=100.00 E-value=8.7e-53 Score=469.77 Aligned_cols=256 Identities=26% Similarity=0.404 Sum_probs=228.2
Q ss_pred ccceeEeeeeccCCcEEEEEEEEeC-CceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEeceeecCCceEEEE
Q 003963 504 WEDLTIGEQIGQGSCGTVYHAVWYG-SQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIVT 582 (783)
Q Consensus 504 ~~~y~i~~~LG~G~fG~Vy~a~~~~-~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lV~ 582 (783)
.+.|+++++||+|+||.||+|.++. ++.||||++....... .+.+.+|+.+|+.|+|||||+++++|.+.+.+||||
T Consensus 150 ~~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~--~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~iVm 227 (423)
T 4fie_A 150 RSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQR--RELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVM 227 (423)
T ss_dssp GGTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTTCSS--GGGHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred hHhcEeeeEeccCcCcEEEEEEECCCCCEEEEEEEeccchhH--HHHHHHHHHHHHhCCCCCCCceEEEEEECCEEEEEE
Confidence 4679999999999999999999865 5779999997654332 346789999999999999999999999999999999
Q ss_pred EecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCccccccccc
Q 003963 583 EFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETYLT 662 (783)
Q Consensus 583 E~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~~~ 662 (783)
|||+||+|.+++... .+++..+..++.||+.||+|||++| ||||||||+||||+.+|.|||+|||+|+........
T Consensus 228 Ey~~gG~L~~~i~~~--~l~e~~~~~~~~qil~aL~ylH~~~--IiHRDiKp~NILl~~~g~vKl~DFGla~~~~~~~~~ 303 (423)
T 4fie_A 228 EFLEGGALTDIVTHT--RMNEEQIAAVCLAVLQALSVLHAQG--VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPR 303 (423)
T ss_dssp ECCTTEEHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHHHTT--EECCCCSTTTEEECTTCCEEECCCTTCEECCSSCCC
T ss_pred eCCCCCcHHHHHhcc--CCCHHHHHHHHHHHHHHHHHHHHCC--eecccCCHHHEEEcCCCCEEEecCccceECCCCCcc
Confidence 999999999999753 5999999999999999999999999 999999999999999999999999999877655445
Q ss_pred ccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccc-ccccCCCCCCHHHHHHHHH
Q 003963 663 TKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMN-QRLEIPKDVDPRWAAIVES 741 (783)
Q Consensus 663 ~~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~elltG~~Pf~~~~~~~~~~~i~~~~-~~~~~~~~~s~~l~~LI~~ 741 (783)
..+.+||+.|||||++.+..|+.++|||||||+||||++|++||.+.+..+.+..+.... .....+..+++++++||.+
T Consensus 304 ~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~ 383 (423)
T 4fie_A 304 RKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRLKNLHKVSPSLKGFLDR 383 (423)
T ss_dssp BCCCEECTTTCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCCCCCSCTTSSCHHHHHHHHH
T ss_pred ccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHcCCCCCCcccccCCHHHHHHHHH
Confidence 567789999999999999999999999999999999999999999988888777664322 2345566799999999999
Q ss_pred hhhhCCCCCCCHHHHHHHHHHHHHHHhhcC
Q 003963 742 CWHSDPQCRPSFQELVDKLRDLQRQYFQAS 771 (783)
Q Consensus 742 cL~~dP~~RPsa~ell~~L~~L~~~~f~~~ 771 (783)
||.+||.+|||+.|+ |+|+||+..
T Consensus 384 ~L~~dP~~R~ta~el------l~Hp~~~~~ 407 (423)
T 4fie_A 384 LLVRDPAQRATAAEL------LKHPFLAKA 407 (423)
T ss_dssp HSCSSTTTSCCHHHH------TTCGGGGGC
T ss_pred HcCCChhHCcCHHHH------hcCHHhcCC
Confidence 999999999999999 789999864
No 11
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*
Probab=100.00 E-value=3.2e-52 Score=452.90 Aligned_cols=254 Identities=25% Similarity=0.300 Sum_probs=219.4
Q ss_pred cccccceeEeeeeccCCcEEEEEEEEeC-CceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEeceeecCCceE
Q 003963 501 EILWEDLTIGEQIGQGSCGTVYHAVWYG-SQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLC 579 (783)
Q Consensus 501 e~~~~~y~i~~~LG~G~fG~Vy~a~~~~-~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~ 579 (783)
....+.|++.++||+|+||.||+|.++. ++.||||++...... .+|+.+|+.|+|||||++++++.+++.+|
T Consensus 54 ~~~~~~~~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~~-------~~E~~il~~l~HpnIV~l~~~~~~~~~~~ 126 (336)
T 4g3f_A 54 REEVHWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVFR-------VEELVACAGLSSPRIVPLYGAVREGPWVN 126 (336)
T ss_dssp CBTTTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCC-------THHHHTTTTCCCTTBCCEEEEEEETTEEE
T ss_pred hcchhheEeCcEeccCCCeEEEEEEECCCCCEEEEEEECHHHhH-------HHHHHHHHhCCCCCCCcEEEEEEECCEEE
Confidence 3445789999999999999999999865 578999999876543 36999999999999999999999999999
Q ss_pred EEEEecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCC-cEEEEecCCCccccc
Q 003963 580 IVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHW-TVKVGDFGLSRLKHE 658 (783)
Q Consensus 580 lV~E~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~-~vkL~DFGla~~~~~ 658 (783)
||||||+||+|.++|.+. ..+++..++.++.||+.||+|||+++ ||||||||+||||+.+| ++||+|||+|+....
T Consensus 127 ivmEy~~gg~L~~~l~~~-~~l~e~~~~~~~~qi~~aL~ylH~~~--IiHRDlKp~NILl~~~g~~vKl~DFGla~~~~~ 203 (336)
T 4g3f_A 127 IFMELLEGGSLGQLIKQM-GCLPEDRALYYLGQALEGLEYLHTRR--ILHGDVKADNVLLSSDGSRAALCDFGHALCLQP 203 (336)
T ss_dssp EEECCCTTCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHTTT--EECSCCCGGGEEECTTSCCEEECCCTTCEEC--
T ss_pred EEEeccCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCC--ceecccCHHHEEEeCCCCEEEEeeCCCCeEccC
Confidence 999999999999999764 46999999999999999999999998 99999999999999887 699999999986543
Q ss_pred cc-----ccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhcccc-cccCCCCCC
Q 003963 659 TY-----LTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQ-RLEIPKDVD 732 (783)
Q Consensus 659 ~~-----~~~~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~elltG~~Pf~~~~~~~~~~~i~~~~~-~~~~~~~~s 732 (783)
.. ......+||+.|||||++.+..++.++|||||||+||||++|++||...+....+..+..... ...++..++
T Consensus 204 ~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~s 283 (336)
T 4g3f_A 204 DGLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGPLCLKIASEPPPIREIPPSCA 283 (336)
T ss_dssp ----------CCCCCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSTTTCCSCCHHHHHHSCCGGGGSCTTSC
T ss_pred CCcccceecCCccccCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHcCCCCchhcCccCC
Confidence 22 122345799999999999999999999999999999999999999988776665555543332 245788999
Q ss_pred HHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHH
Q 003963 733 PRWAAIVESCWHSDPQCRPSFQELVDKLRDLQ 764 (783)
Q Consensus 733 ~~l~~LI~~cL~~dP~~RPsa~ell~~L~~L~ 764 (783)
+.+.+||.+||++||.+|||+.||+++|....
T Consensus 284 ~~~~~li~~~L~~dP~~R~sa~el~~~l~~~l 315 (336)
T 4g3f_A 284 PLTAQAIQEGLRKEPVHRASAMELRRKVGKAL 315 (336)
T ss_dssp HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHccCCHhHCcCHHHHHHHHHHHH
Confidence 99999999999999999999999999887654
No 12
>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A
Probab=100.00 E-value=4.2e-52 Score=448.60 Aligned_cols=258 Identities=29% Similarity=0.526 Sum_probs=225.5
Q ss_pred cccccceeEeeeeccCCcEEEEEEEEe------CCceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEeceeec
Q 003963 501 EILWEDLTIGEQIGQGSCGTVYHAVWY------GSQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTS 574 (783)
Q Consensus 501 e~~~~~y~i~~~LG~G~fG~Vy~a~~~------~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~ 574 (783)
++...++++.++||+|+||.||+|.+. .++.||||++.... .....+.|.+|+.+|++|+|||||+++++|..
T Consensus 22 ei~~~~~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~-~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~ 100 (308)
T 4gt4_A 22 EISLSAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKA-EGPLREEFRHEAMLRARLQHPNVVCLLGVVTK 100 (308)
T ss_dssp BCCGGGEEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-C-CC-CHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred cCCHHHCeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECccc-ChHHHHHHHHHHHHHHhCCCCCCCCcceEEEE
Confidence 456678999999999999999999863 24579999987543 33445689999999999999999999999999
Q ss_pred CCceEEEEEecCCCCHHHHHhhc---------------CCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEE
Q 003963 575 PQRLCIVTEFLPRGSLFRLLQRN---------------TTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLV 639 (783)
Q Consensus 575 ~~~~~lV~E~~~ggsL~~~L~~~---------------~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl 639 (783)
++.++||||||++|+|.++|... ...+++..++.++.||+.||+|||+++ ||||||||+||||
T Consensus 101 ~~~~~lV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~--iiHRDLK~~NILl 178 (308)
T 4gt4_A 101 DQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSHH--VVHKDLATRNVLV 178 (308)
T ss_dssp SSSCEEEEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCSGGGEEE
T ss_pred CCEEEEEEEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhCC--CCCCCccccceEE
Confidence 99999999999999999999643 235899999999999999999999998 9999999999999
Q ss_pred cCCCcEEEEecCCCcccccc--cccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCChHHHHH
Q 003963 640 DKHWTVKVGDFGLSRLKHET--YLTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELAT-EKIPWDNLNSMQVIG 716 (783)
Q Consensus 640 ~~~~~vkL~DFGla~~~~~~--~~~~~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~ellt-G~~Pf~~~~~~~~~~ 716 (783)
+.++.+||+|||+++..... .......+||+.|||||++.+..++.++|||||||+||||+| |..||.+.+..+...
T Consensus 179 ~~~~~~Ki~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~~s~ksDVwSfGvvl~El~t~g~~Pf~~~~~~~~~~ 258 (308)
T 4gt4_A 179 YDKLNVKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVVE 258 (308)
T ss_dssp CGGGCEEECCSCCBCGGGGGGCBCSSSSSCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTCCHHHHHH
T ss_pred CCCCCEEECCcccceeccCCCceeEecccccCCcccCHHHHhCCCCCccchhhhHHHHHHHHHhCCCCCCCCCCHHHHHH
Confidence 99999999999999865432 222345679999999999999999999999999999999998 899999999888877
Q ss_pred HhhcccccccCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHH
Q 003963 717 AVGFMNQRLEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRD 762 (783)
Q Consensus 717 ~i~~~~~~~~~~~~~s~~l~~LI~~cL~~dP~~RPsa~ell~~L~~ 762 (783)
.+. ....++.|..+++++.+||.+||+.||.+|||+.+|++.|+.
T Consensus 259 ~i~-~~~~~~~p~~~~~~~~~li~~C~~~dP~~RPs~~ei~~~L~a 303 (308)
T 4gt4_A 259 MIR-NRQVLPCPDDCPAWVYALMIECWNEFPSRRPRFKDIHSRLRA 303 (308)
T ss_dssp HHH-TTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHT
T ss_pred HHH-cCCCCCCcccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHh
Confidence 764 344567888999999999999999999999999999998864
No 13
>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*
Probab=100.00 E-value=4e-51 Score=448.72 Aligned_cols=265 Identities=29% Similarity=0.533 Sum_probs=228.5
Q ss_pred ccccccccceeEeeeeccCCcEEEEEEEEeCC------ceEEEEEEecccCCHHHHHHHHHHHHHHHhCCC-CceeeEec
Q 003963 498 LDYEILWEDLTIGEQIGQGSCGTVYHAVWYGS------QDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRH-PNVLLFMG 570 (783)
Q Consensus 498 ~~~e~~~~~y~i~~~LG~G~fG~Vy~a~~~~~------~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~H-pnIv~l~~ 570 (783)
..||+..++|+++++||+|+||.||+|.+.+. +.||||++.... .....+.|.+|+.+|..+.| ||||++++
T Consensus 57 ~~wEi~~~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~-~~~~~~~~~~E~~il~~l~hhpnIV~l~g 135 (353)
T 4ase_A 57 SKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGA-THSEHRALMSELKILIHIGHHLNVVNLLG 135 (353)
T ss_dssp HHHBCCGGGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTC-CHHHHHHHHHHHHHHHHHCCCTTBCCEEE
T ss_pred cccEecHHHeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEcccc-ChHHHHHHHHHHHHHHHcCCCCcEEEEEE
Confidence 45788899999999999999999999998653 469999987654 34456789999999999975 89999999
Q ss_pred eeecC-CceEEEEEecCCCCHHHHHhhcC---------------CcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCC
Q 003963 571 AVTSP-QRLCIVTEFLPRGSLFRLLQRNT---------------TKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKS 634 (783)
Q Consensus 571 ~~~~~-~~~~lV~E~~~ggsL~~~L~~~~---------------~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp 634 (783)
+|..+ +.+|||||||++|+|.++|+... ..+++..++.++.||+.||+|||+++ ||||||||
T Consensus 136 ~~~~~~~~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH~~~--iiHRDLK~ 213 (353)
T 4ase_A 136 ACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRK--CIHRDLAA 213 (353)
T ss_dssp EECCTTSCCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCSG
T ss_pred EEEecCCEEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHhhCC--eecCccCc
Confidence 98764 57899999999999999997532 34889999999999999999999998 99999999
Q ss_pred CCEEEcCCCcEEEEecCCCcccccc--cccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCCh
Q 003963 635 SNLLVDKHWTVKVGDFGLSRLKHET--YLTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELAT-EKIPWDNLNS 711 (783)
Q Consensus 635 ~NILl~~~~~vkL~DFGla~~~~~~--~~~~~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~ellt-G~~Pf~~~~~ 711 (783)
+||||+.++.+||+|||+|+..... .......+||+.|||||++.+..++.++|||||||+||||+| |..||.+.+.
T Consensus 214 ~NILl~~~~~vKi~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~y~~ksDVwS~Gv~l~El~t~G~~Pf~~~~~ 293 (353)
T 4ase_A 214 RNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKI 293 (353)
T ss_dssp GGEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCC
T ss_pred cceeeCCCCCEEECcchhhhhcccCCCceeeccccccccccCHHHHhcCCCCCcccEeehHHHHHHHHhCCCCCCCCCCH
Confidence 9999999999999999999865432 223334578999999999999999999999999999999998 9999998775
Q ss_pred HHHHHHhhcccccccCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHH
Q 003963 712 MQVIGAVGFMNQRLEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQR 765 (783)
Q Consensus 712 ~~~~~~i~~~~~~~~~~~~~s~~l~~LI~~cL~~dP~~RPsa~ell~~L~~L~~ 765 (783)
.+.+........++..|..+++++.+||.+||+.||.+|||+.+|+++|+++.+
T Consensus 294 ~~~~~~~i~~g~~~~~p~~~~~~~~~li~~c~~~dP~~RPt~~eil~~L~~llq 347 (353)
T 4ase_A 294 DEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQ 347 (353)
T ss_dssp SHHHHHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCCCCCccCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHHH
Confidence 554444433455778889999999999999999999999999999999988764
No 14
>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}
Probab=100.00 E-value=2.6e-49 Score=441.46 Aligned_cols=259 Identities=21% Similarity=0.330 Sum_probs=219.7
Q ss_pred ccceeEeeeeccCCcEEEEEEEEeC-CceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEeceeec------CC
Q 003963 504 WEDLTIGEQIGQGSCGTVYHAVWYG-SQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTS------PQ 576 (783)
Q Consensus 504 ~~~y~i~~~LG~G~fG~Vy~a~~~~-~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~------~~ 576 (783)
.++|+++++||+|+||.||+|.+.. ++.||||++..........+.+.+|+.+|+.|+|||||++++++.. .+
T Consensus 53 ~~~Y~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~~ 132 (398)
T 4b99_A 53 GDEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFK 132 (398)
T ss_dssp CSSEEEEEEEEECSSCEEEEEEETTTCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTTCC
T ss_pred CCCeEEEEEEecccCeEEEEEEECCCCCEEEEEEECccccchHHHHHHHHHHHHHHhcCCCCcceEeeeeecccccccCC
Confidence 3689999999999999999999865 5789999998776666667788999999999999999999998753 36
Q ss_pred ceEEEEEecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCccc
Q 003963 577 RLCIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLK 656 (783)
Q Consensus 577 ~~~lV~E~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~ 656 (783)
.+|||||||+ |+|.+++... ..+++..+..++.||+.||+|||++| ||||||||+|||++.++.+||+|||+|+..
T Consensus 133 ~~~ivmE~~~-g~L~~~i~~~-~~l~~~~~~~~~~qil~al~ylH~~~--iiHRDlKP~NIl~~~~~~~Ki~DFGla~~~ 208 (398)
T 4b99_A 133 SVYVVLDLME-SDLHQIIHSS-QPLTLEHVRYFLYQLLRGLKYMHSAQ--VIHRDLKPSNLLVNENCELKIGDFGMARGL 208 (398)
T ss_dssp CEEEEEECCS-EEHHHHHTSS-SCCCHHHHHHHHHHHHHHHHHHHHTT--CBCCCCCGGGEEECTTCCEEECCCTTCBCC
T ss_pred EEEEEEeCCC-CCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCc--CcCCCcCccccccCCCCCEEEeecceeeec
Confidence 7899999995 6899999764 56999999999999999999999999 999999999999999999999999999865
Q ss_pred ccc----cccccCCCCCCcccCcccccCC-CCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhcccccc------
Q 003963 657 HET----YLTTKTGKGTPQWMAPEVLRNE-PSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRL------ 725 (783)
Q Consensus 657 ~~~----~~~~~~~~Gt~~Y~aPE~~~~~-~~s~~sDIwSLG~il~elltG~~Pf~~~~~~~~~~~i~~~~~~~------ 725 (783)
... .....+.+||+.|||||++.+. .++.++|||||||++|||++|++||.+.+....+..+......+
T Consensus 209 ~~~~~~~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~ell~G~~pF~g~~~~~~l~~I~~~~g~p~~~~~~ 288 (398)
T 4b99_A 209 CTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLGTPSPAVIQ 288 (398)
T ss_dssp -------CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTSCSSCCSSHHHHHHHHHHHHCCCCGGGTC
T ss_pred ccCccccccccccceeChHhcCHHHhcCCCCCCChhheehhHHHHHHHHHCCCCCCCCCHHHHHHHHHHhcCCCChHHhh
Confidence 432 1223456899999999998875 46999999999999999999999999988877666553221111
Q ss_pred -----------------------cCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhcCc
Q 003963 726 -----------------------EIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQASR 772 (783)
Q Consensus 726 -----------------------~~~~~~s~~l~~LI~~cL~~dP~~RPsa~ell~~L~~L~~~~f~~~~ 772 (783)
.+.+.+++++.+||.+||..||.+|||+.|+ |+|+||+...
T Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~------L~Hp~f~~~~ 352 (398)
T 4b99_A 289 AVGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAA------LRHPFLAKYH 352 (398)
T ss_dssp -----CHHHHHHSSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSTTTSCCHHHH------TTSGGGTTTC
T ss_pred hhhhhhhhhhhhcCCCcCCCCHHHhCCCCCHHHHHHHHHHCcCChhHCcCHHHH------hcCHhhCcCC
Confidence 0123578999999999999999999999999 7899998653
No 15
>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*
Probab=100.00 E-value=9.9e-50 Score=428.62 Aligned_cols=254 Identities=24% Similarity=0.353 Sum_probs=198.4
Q ss_pred cceeEeeeeccCCcEEEEEEEEeC-CceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEeceeecCC-------
Q 003963 505 EDLTIGEQIGQGSCGTVYHAVWYG-SQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQ------- 576 (783)
Q Consensus 505 ~~y~i~~~LG~G~fG~Vy~a~~~~-~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~------- 576 (783)
++|++++.||+|+||.||+|.++. ++.||||++.... .....+.+.+|+.+|+.|+|||||+++++|...+
T Consensus 5 ~dy~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~-~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~ 83 (299)
T 4g31_A 5 TDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPN-RELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQP 83 (299)
T ss_dssp HHEEEEEEEEECC--EEEEEEETTTCCEEEEEEEEECS-SHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC-------
T ss_pred hhCEEeeEEecCCCeEEEEEEECCCCCEEEEEEEeccC-CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCccccccc
Confidence 579999999999999999999864 5789999997654 3445678899999999999999999999987544
Q ss_pred -----ceEEEEEecCCCCHHHHHhhcCC--cchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEe
Q 003963 577 -----RLCIVTEFLPRGSLFRLLQRNTT--KLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGD 649 (783)
Q Consensus 577 -----~~~lV~E~~~ggsL~~~L~~~~~--~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~D 649 (783)
++|||||||++|+|.+++..... ..++..++.++.||+.||+|||+++ ||||||||+||||+.++.+||+|
T Consensus 84 ~~~~~~l~ivmE~~~gg~L~~~l~~~~~~~~~~~~~~~~i~~qi~~al~ylH~~~--IiHRDlKp~NILl~~~~~vKl~D 161 (299)
T 4g31_A 84 SSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLHSKG--LMHRDLKPSNIFFTMDDVVKVGD 161 (299)
T ss_dssp ---CEEEEEEEECCCSCCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHHHHTT--CCCCCCCGGGEEECTTCCEEECC
T ss_pred cCCCcEEEEEEecCCCCcHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHHHHCc--CccccCcHHHeEECCCCcEEEcc
Confidence 37999999999999999976432 2445678899999999999999999 99999999999999999999999
Q ss_pred cCCCcccccccc------------cccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCCh-HHHHH
Q 003963 650 FGLSRLKHETYL------------TTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNS-MQVIG 716 (783)
Q Consensus 650 FGla~~~~~~~~------------~~~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~elltG~~Pf~~~~~-~~~~~ 716 (783)
||+|+....... ...+.+||+.|||||++.+..++.++|||||||+||||++ ||..... ...+.
T Consensus 162 FGla~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyell~---Pf~~~~~~~~~~~ 238 (299)
T 4g31_A 162 FGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY---PFSTQMERVRTLT 238 (299)
T ss_dssp CCCC--------------------------CCCTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHS---CCSSHHHHHHHHH
T ss_pred CccceecCCCccccccccccccccccCCcccCccccCHHHHcCCCCCCHHHHHHHHHHHHHHcc---CCCCccHHHHHHH
Confidence 999986543221 1234579999999999999999999999999999999996 7754321 12222
Q ss_pred HhhcccccccCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhcC
Q 003963 717 AVGFMNQRLEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQAS 771 (783)
Q Consensus 717 ~i~~~~~~~~~~~~~s~~l~~LI~~cL~~dP~~RPsa~ell~~L~~L~~~~f~~~ 771 (783)
.+.. ...++.+...++.+.+||.+||++||.+|||+.++ ++|+||+..
T Consensus 239 ~~~~-~~~p~~~~~~~~~~~~li~~~L~~dP~~Rps~~ei------l~h~~~~~~ 286 (299)
T 4g31_A 239 DVRN-LKFPPLFTQKYPCEYVMVQDMLSPSPMERPEAINI------IENAVFEDL 286 (299)
T ss_dssp HHHT-TCCCHHHHHHCHHHHHHHHHHTCSSGGGSCCHHHH------HTSGGGCCC
T ss_pred HHhc-CCCCCCCcccCHHHHHHHHHHcCCChhHCcCHHHH------hcCHhhCCC
Confidence 2211 11122223456778999999999999999999999 678999864
No 16
>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*
Probab=100.00 E-value=1.4e-47 Score=422.55 Aligned_cols=254 Identities=23% Similarity=0.370 Sum_probs=206.6
Q ss_pred cccceeEeeeeccCCcEEEEEEEEe----CCceEEEEEEecccCCHHHHHHHHHHHHHHHhC-CCCceeeEeceeecCCc
Q 003963 503 LWEDLTIGEQIGQGSCGTVYHAVWY----GSQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRL-RHPNVLLFMGAVTSPQR 577 (783)
Q Consensus 503 ~~~~y~i~~~LG~G~fG~Vy~a~~~----~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l-~HpnIv~l~~~~~~~~~ 577 (783)
+.++|++.++||+|+||.||+|.++ .++.||||++..... ...+.+|+.+|+.+ +|||||+++++|.+.++
T Consensus 19 l~~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~----~~~~~~E~~~l~~~~~h~nIv~l~~~~~~~~~ 94 (361)
T 4f9c_A 19 LSNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTSH----PIRIAAELQCLTVAGGQDNVMGVKYCFRKNDH 94 (361)
T ss_dssp GGGTCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTTSC----HHHHHHHHHHHHHTCSBTTBCCCSEEEEETTE
T ss_pred ccCcEEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEccccC----HHHHHHHHHHHHHhcCCCCCceEEEEEEECCE
Confidence 4578999999999999999999875 245799999866432 24577899999998 69999999999999999
Q ss_pred eEEEEEecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCC-CcEEEEecCCCccc
Q 003963 578 LCIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKH-WTVKVGDFGLSRLK 656 (783)
Q Consensus 578 ~~lV~E~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~-~~vkL~DFGla~~~ 656 (783)
+|||||||+||+|.+++. .+++..+..++.||+.||+|||++| ||||||||+||||+.+ +.+||+|||+|+..
T Consensus 95 ~~lvmE~~~g~~L~~~~~----~l~~~~~~~~~~qll~al~ylH~~g--IiHRDiKPeNiLl~~~~~~~kl~DFGla~~~ 168 (361)
T 4f9c_A 95 VVIAMPYLEHESFLDILN----SLSFQEVREYMLNLFKALKRIHQFG--IVHRDVKPSNFLYNRRLKKYALVDFGLAQGT 168 (361)
T ss_dssp EEEEEECCCCCCHHHHHT----TCCHHHHHHHHHHHHHHHHHHHHTT--EECSCCSGGGEEEETTTTEEEECCCTTCEEC
T ss_pred EEEEEeCCCcccHHHHHc----CCCHHHHHHHHHHHHHHHHHHHHCC--eEeCcCCHHHeEEeCCCCeEEECcCCCCccc
Confidence 999999999999999984 3889999999999999999999999 9999999999999876 79999999999754
Q ss_pred ccccc----------------------------cccCCCCCCcccCcccccCCC-CCchhHHHHHHHHHHHHHcCCCCCC
Q 003963 657 HETYL----------------------------TTKTGKGTPQWMAPEVLRNEP-SDEKSDVYSFGVILWELATEKIPWD 707 (783)
Q Consensus 657 ~~~~~----------------------------~~~~~~Gt~~Y~aPE~~~~~~-~s~~sDIwSLG~il~elltG~~Pf~ 707 (783)
..... ...+.+||+.|||||++.+.. ++.++|||||||++|+|++|++||.
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~y~~~~DiWSlG~il~ell~G~~Pf~ 248 (361)
T 4f9c_A 169 HDTKIELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGRYPFY 248 (361)
T ss_dssp TTCSCGGGGGC--------------------------CCCCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTCSSSS
T ss_pred CCccccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCCccchhhhHHHHHHHHHCCCCCC
Confidence 33211 122457999999999998764 8999999999999999999999995
Q ss_pred CC-ChHHHHHHhhccc----------------------------------------------------ccccCCCCCCHH
Q 003963 708 NL-NSMQVIGAVGFMN----------------------------------------------------QRLEIPKDVDPR 734 (783)
Q Consensus 708 ~~-~~~~~~~~i~~~~----------------------------------------------------~~~~~~~~~s~~ 734 (783)
.. +....+..+.... ........++++
T Consensus 249 ~~~~~~~~l~~I~~~~G~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~is~~ 328 (361)
T 4f9c_A 249 KASDDLTALAQIMTIRGSRETIQAAKTFGKSILCSKEVPAQDLRKLCERLRGMDSSTPKLTSDIQGHATNLEGWNEVPDE 328 (361)
T ss_dssp CCSSHHHHHHHHHHHHCHHHHHHHHHHTTEEEEESSCCCCCCHHHHHHHHC----------------------CTTCCHH
T ss_pred CCCCHHHHHHHHHHhcCCccchhhhhhccccccccccCcchhhhHHHHhhccccccccccccccccccccccccccCCHH
Confidence 43 3333222211000 001123457899
Q ss_pred HHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhcCc
Q 003963 735 WAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQASR 772 (783)
Q Consensus 735 l~~LI~~cL~~dP~~RPsa~ell~~L~~L~~~~f~~~~ 772 (783)
+.+||.+||+.||.+|||+.|+ |+|+||+.+.
T Consensus 329 a~DLl~~lL~~dP~~R~ta~ea------L~Hp~f~~i~ 360 (361)
T 4f9c_A 329 AYDLLDKLLDLNPASRITAEEA------LLHPFFKDMS 360 (361)
T ss_dssp HHHHHHHHTCSCTTTSCCHHHH------HTSGGGTTC-
T ss_pred HHHHHHHHCcCChhHCcCHHHH------hcCcccCCCC
Confidence 9999999999999999999999 7899998753
No 17
>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=5.4e-48 Score=416.25 Aligned_cols=256 Identities=32% Similarity=0.497 Sum_probs=199.6
Q ss_pred ccceeEeeeeccCCcEEEEEEEEeCCceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEeceeecCC----ceE
Q 003963 504 WEDLTIGEQIGQGSCGTVYHAVWYGSQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQ----RLC 579 (783)
Q Consensus 504 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~----~~~ 579 (783)
.++|.+.++||+|+||.||+|.+ .++.||||++.... .....+..|+..+..++|||||++++++..++ .+|
T Consensus 2 ar~i~L~~~iG~G~fG~Vy~~~~-~g~~VAvK~l~~~~---~~~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~~~~~~~ 77 (303)
T 3hmm_A 2 ARTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSRE---ERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLW 77 (303)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEE-TTEEEEEEEECGGG---HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEE
T ss_pred CcEEEEEEEEeeCCCeEEEEEEE-CCEEEEEEEECccc---hhhHHHHHHHHHHhcCCCCCCCcEEEEEEecCCCceEEE
Confidence 36799999999999999999987 46789999986543 11122334666667889999999999998654 579
Q ss_pred EEEEecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhC------CCCEEecCCCCCCEEEcCCCcEEEEecCCC
Q 003963 580 IVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHC------NPPIIHRDLKSSNLLVDKHWTVKVGDFGLS 653 (783)
Q Consensus 580 lV~E~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~------~~~IvHrDIKp~NILl~~~~~vkL~DFGla 653 (783)
||||||++|+|.++|... ++++..++.++.|++.||+|||++ .++||||||||+||||+.++.+||+|||++
T Consensus 78 lV~Ey~~~gsL~~~l~~~--~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~~~~~Ki~DFGla 155 (303)
T 3hmm_A 78 LVSDYHEHGSLFDYLNRY--TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA 155 (303)
T ss_dssp EEEECCTTCBHHHHHHHC--CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCTTC
T ss_pred EEecCCCCCcHHHHHHhC--CCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECCCCCEEEEeCCCC
Confidence 999999999999999764 489999999999999999999986 123999999999999999999999999999
Q ss_pred cccccccc----cccCCCCCCcccCcccccCC------CCCchhHHHHHHHHHHHHHcCCCCCC----------CC----
Q 003963 654 RLKHETYL----TTKTGKGTPQWMAPEVLRNE------PSDEKSDVYSFGVILWELATEKIPWD----------NL---- 709 (783)
Q Consensus 654 ~~~~~~~~----~~~~~~Gt~~Y~aPE~~~~~------~~s~~sDIwSLG~il~elltG~~Pf~----------~~---- 709 (783)
+....... .....+||+.|||||++.+. .++.++|||||||+||||+||.+||. ..
T Consensus 156 ~~~~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg~~~~~~~~~~~~p~~~~~~~~ 235 (303)
T 3hmm_A 156 VRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSD 235 (303)
T ss_dssp EEEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSCSS
T ss_pred ccccCCCCceeeecccccccccccCHHHhcccccccCCccChhHhhhhHHHHHHHHHHCCCCCCccccccccchhccccc
Confidence 86544322 12245799999999999765 35679999999999999999977653 21
Q ss_pred -ChHHHHHHhhcccccccCCCC-----CCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHH
Q 003963 710 -NSMQVIGAVGFMNQRLEIPKD-----VDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQR 765 (783)
Q Consensus 710 -~~~~~~~~i~~~~~~~~~~~~-----~s~~l~~LI~~cL~~dP~~RPsa~ell~~L~~L~~ 765 (783)
........+.....++.+|.. +++.+.+||.+||+.||.+|||+.+|++.|++|.+
T Consensus 236 ~~~~~~~~~~~~~~~rp~~p~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~L~~l~~ 297 (303)
T 3hmm_A 236 PSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQ 297 (303)
T ss_dssp CCHHHHHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHHHHH
T ss_pred chHHHHHHHHhcccCCCCCCccccchHHHHHHHHHHHHHcccCHhHCcCHHHHHHHHHHHHH
Confidence 112222233222333444433 23578999999999999999999999999998865
No 18
>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A
Probab=100.00 E-value=1.8e-47 Score=445.58 Aligned_cols=257 Identities=23% Similarity=0.395 Sum_probs=218.3
Q ss_pred ccccceeEeeeeccCCcEEEEEEEEeC-CceEEEEEEecccC----CHHHHHHHHHHHHHHHhCCCCceeeEeceeecCC
Q 003963 502 ILWEDLTIGEQIGQGSCGTVYHAVWYG-SQDVAVKVFSRQEY----SDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQ 576 (783)
Q Consensus 502 ~~~~~y~i~~~LG~G~fG~Vy~a~~~~-~~~vAiK~i~~~~~----~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~ 576 (783)
+..++|+++++||+|+||.||+|.++. ++.||||++.+... ..........++.+++.++|||||+++++|++.+
T Consensus 186 ~slddf~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~~~ 265 (689)
T 3v5w_A 186 LTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPD 265 (689)
T ss_dssp CCGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSS
T ss_pred CchHHeEEEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEEECC
Confidence 345789999999999999999999865 56799999976432 2233333444567777889999999999999999
Q ss_pred ceEEEEEecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCccc
Q 003963 577 RLCIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLK 656 (783)
Q Consensus 577 ~~~lV~E~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~ 656 (783)
.+|||||||+||+|.++|.+. ..+++..+..++.||+.||+|||++| ||||||||+||||+.+|+|||+|||+|+..
T Consensus 266 ~lylVmEy~~GGdL~~~l~~~-~~l~E~~a~~y~~qIl~aL~yLH~~g--IiHRDLKPeNILld~~G~vKL~DFGlA~~~ 342 (689)
T 3v5w_A 266 KLSFILDLMNGGDLHYHLSQH-GVFSEADMRFYAAEIILGLEHMHNRF--VVYRDLKPANILLDEHGHVRISDLGLACDF 342 (689)
T ss_dssp EEEEEECCCCSCBHHHHHHHH-CCCCHHHHHHHHHHHHHHHHHHHTTT--EECCCCSGGGEEECTTSCEEECCCTTCEEC
T ss_pred EEEEEEecCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCC--ccccCCchHHeEEeCCCCEEecccceeeec
Confidence 999999999999999999864 46999999999999999999999999 999999999999999999999999999866
Q ss_pred ccccccccCCCCCCcccCccccc-CCCCCchhHHHHHHHHHHHHHcCCCCCCCCC---hHHHHHHhhcccccccCCCCCC
Q 003963 657 HETYLTTKTGKGTPQWMAPEVLR-NEPSDEKSDVYSFGVILWELATEKIPWDNLN---SMQVIGAVGFMNQRLEIPKDVD 732 (783)
Q Consensus 657 ~~~~~~~~~~~Gt~~Y~aPE~~~-~~~~s~~sDIwSLG~il~elltG~~Pf~~~~---~~~~~~~i~~~~~~~~~~~~~s 732 (783)
... ...+.+||+.|||||++. +..|+.++|||||||+||||++|.+||...+ .......+ ......+|..++
T Consensus 343 ~~~--~~~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~~PF~~~~~~~~~~i~~~i--~~~~~~~p~~~S 418 (689)
T 3v5w_A 343 SKK--KPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMT--LTMAVELPDSFS 418 (689)
T ss_dssp SSC--CCCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCTTCGGGCCCHHHHHHHH--HHCCCCCCTTSC
T ss_pred CCC--CCCCccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhh--cCCCCCCCccCC
Confidence 543 344679999999999996 5679999999999999999999999997543 22333332 344567888999
Q ss_pred HHHHHHHHHhhhhCCCCCCC-----HHHHHHHHHHHHHHHhhcC
Q 003963 733 PRWAAIVESCWHSDPQCRPS-----FQELVDKLRDLQRQYFQAS 771 (783)
Q Consensus 733 ~~l~~LI~~cL~~dP~~RPs-----a~ell~~L~~L~~~~f~~~ 771 (783)
+++++||.+||.+||.+|++ +.+| +.|+||+.+
T Consensus 419 ~~a~dLI~~lL~~dP~~Rl~~~~~ga~ei------~~HpfF~~i 456 (689)
T 3v5w_A 419 PELRSLLEGLLQRDVNRRLGCLGRGAQEV------KESPFFRSL 456 (689)
T ss_dssp HHHHHHHHHHTCSCGGGCTTCSSSTHHHH------TTSGGGTTC
T ss_pred HHHHHHHHHHccCCHhHCCCCCCCCHHHH------hcCccccCC
Confidence 99999999999999999998 7888 689999764
No 19
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=100.00 E-value=3.2e-47 Score=444.07 Aligned_cols=259 Identities=21% Similarity=0.369 Sum_probs=228.3
Q ss_pred cccceeEeeeeccCCcEEEEEEEEeC-CceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEeceeecCCceEEE
Q 003963 503 LWEDLTIGEQIGQGSCGTVYHAVWYG-SQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIV 581 (783)
Q Consensus 503 ~~~~y~i~~~LG~G~fG~Vy~a~~~~-~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lV 581 (783)
..++|++++.||+|+||.||+|.++. ++.||||++.... ....+.+.+|+.+|+.|+|||||+++++|.++..+|||
T Consensus 155 il~~Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~--~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iv 232 (573)
T 3uto_A 155 VLDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPH--ESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMI 232 (573)
T ss_dssp GGGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS--HHHHHHHHHHHHHHHHTCCTTBCCEEEEEECSSEEEEE
T ss_pred CccccEEEEEEeeccCeEEEEEEECCCCCEEEEEEEeccc--hhhHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEE
Confidence 45789999999999999999999865 5679999997654 33356788999999999999999999999999999999
Q ss_pred EEecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCC--CcEEEEecCCCcccccc
Q 003963 582 TEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKH--WTVKVGDFGLSRLKHET 659 (783)
Q Consensus 582 ~E~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~--~~vkL~DFGla~~~~~~ 659 (783)
||||+||+|.++|......+++..+..++.||+.||.|||+++ |+||||||+|||++.+ +.+||+|||+++.....
T Consensus 233 ~E~~~gg~L~~~i~~~~~~l~e~~~~~~~~qi~~al~ylH~~~--iiHRDlKp~Nill~~~~~~~vKl~DFG~a~~~~~~ 310 (573)
T 3uto_A 233 YEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENN--YVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPK 310 (573)
T ss_dssp EECCCCCBHHHHHTCTTSCEEHHHHHHHHHHHHHHHHHHHHTT--EECCCCCGGGEEESSSSCCCEEECCCSSCEECCTT
T ss_pred EeecCCCcHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCC--eeeccCChhhccccCCCCCCEEEeeccceeEccCC
Confidence 9999999999999766667999999999999999999999999 9999999999999854 89999999999876543
Q ss_pred cccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccccc--ccCCCCCCHHHHH
Q 003963 660 YLTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQR--LEIPKDVDPRWAA 737 (783)
Q Consensus 660 ~~~~~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~elltG~~Pf~~~~~~~~~~~i~~~~~~--~~~~~~~s~~l~~ 737 (783)
. .....+||+.|||||++.+..++.++|||||||+||+|++|.+||.+.+..+.+..+...... ...+..+++++++
T Consensus 311 ~-~~~~~~GT~~y~APEv~~~~~y~~~~DiWSlGvilyeml~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~d 389 (573)
T 3uto_A 311 Q-SVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMDDSAFSGISEDGKD 389 (573)
T ss_dssp S-EEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHTTCCCCCSGGGTTSCHHHHH
T ss_pred C-ceeeeEECccccCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHhCCCCCCcccccCCCHHHHH
Confidence 2 233568999999999999999999999999999999999999999999988888777544332 2334678999999
Q ss_pred HHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhcCc
Q 003963 738 IVESCWHSDPQCRPSFQELVDKLRDLQRQYFQASR 772 (783)
Q Consensus 738 LI~~cL~~dP~~RPsa~ell~~L~~L~~~~f~~~~ 772 (783)
||.+||.+||.+|||+.|+ |+|+||+...
T Consensus 390 li~~~L~~dp~~R~t~~e~------l~Hpw~~~~~ 418 (573)
T 3uto_A 390 FIRKLLLADPNTRMTIHQA------LEHPWLTPGN 418 (573)
T ss_dssp HHHTTSCSSGGGSCCHHHH------HHSTTTSCCC
T ss_pred HHHHHccCChhHCcCHHHH------hcCcCcCCCC
Confidence 9999999999999999999 6789998654
No 20
>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*
Probab=100.00 E-value=2.2e-45 Score=396.77 Aligned_cols=268 Identities=60% Similarity=1.033 Sum_probs=228.7
Q ss_pred ccccccccceeEeeeeccCCcEEEEEEEEeCCceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEeceeecCCc
Q 003963 498 LDYEILWEDLTIGEQIGQGSCGTVYHAVWYGSQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQR 577 (783)
Q Consensus 498 ~~~e~~~~~y~i~~~LG~G~fG~Vy~a~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~ 577 (783)
..+++...+|++.++||+|+||.||+|.+ .++.||||++............+.+|+.+++.++||||+++++++.....
T Consensus 30 ~~~~i~~~~y~i~~~lG~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~ 108 (309)
T 3p86_A 30 DDMDIPWCDLNIKEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPN 108 (309)
T ss_dssp --CBCCGGGEEEEEEEEECSSEEEEEEEE-TTEEEEEEEECCCCCSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTC
T ss_pred ccccCChhHceeeeEeecCCCeEEEEEEE-CCCcEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCc
Confidence 34567788999999999999999999986 46689999998877777777889999999999999999999999999999
Q ss_pred eEEEEEecCCCCHHHHHhhcCC--cchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCcc
Q 003963 578 LCIVTEFLPRGSLFRLLQRNTT--KLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRL 655 (783)
Q Consensus 578 ~~lV~E~~~ggsL~~~L~~~~~--~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~ 655 (783)
+++||||+++++|.+++..... .+++..++.++.||+.||+|||+++.+|+||||||+||||+.++.+||+|||+++.
T Consensus 109 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~ 188 (309)
T 3p86_A 109 LSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRNPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRL 188 (309)
T ss_dssp CEEEEECCTTCBHHHHHHSTTHHHHSCHHHHHHHHHHHHHHHHHHHTSSSCCCCTTCCGGGEEECTTCCEEECCCC----
T ss_pred eEEEEecCCCCcHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCEECCCCChhhEEEeCCCcEEECCCCCCcc
Confidence 9999999999999999976432 38899999999999999999999876699999999999999999999999999986
Q ss_pred cccccccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhcccccccCCCCCCHHH
Q 003963 656 KHETYLTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRW 735 (783)
Q Consensus 656 ~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~l 735 (783)
............||+.|+|||++.+..++.++|||||||++|+|++|..||...+..+....+........++..+++++
T Consensus 189 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 268 (309)
T 3p86_A 189 KASTFLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPAQVVAAVGFKCKRLEIPRNLNPQV 268 (309)
T ss_dssp -------------CCTTSCHHHHTTCCCCTTHHHHHHHHHHHHHHHCCCTTTTSCHHHHHHHHHHSCCCCCCCTTSCHHH
T ss_pred ccccccccccCCCCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCCCCCccCCHHH
Confidence 65554444566799999999999999999999999999999999999999999988888777766667778889999999
Q ss_pred HHHHHHhhhhCCCCCCCHHHHHHHHHHHHHH
Q 003963 736 AAIVESCWHSDPQCRPSFQELVDKLRDLQRQ 766 (783)
Q Consensus 736 ~~LI~~cL~~dP~~RPsa~ell~~L~~L~~~ 766 (783)
.+||.+||..||.+|||+.++++.|+.+...
T Consensus 269 ~~li~~~l~~dP~~Rps~~~ll~~L~~~~~~ 299 (309)
T 3p86_A 269 AAIIEGCWTNEPWKRPSFATIMDLLRPLIKS 299 (309)
T ss_dssp HHHHHHHTCSSGGGSCCHHHHHHHHHHHHC-
T ss_pred HHHHHHHccCChhhCcCHHHHHHHHHHHHHh
Confidence 9999999999999999999999998877654
No 21
>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A
Probab=100.00 E-value=5.2e-45 Score=397.39 Aligned_cols=260 Identities=24% Similarity=0.434 Sum_probs=231.8
Q ss_pred cccccceeEeeeeccCCcEEEEEEEEe-CCceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEeceeecCCceE
Q 003963 501 EILWEDLTIGEQIGQGSCGTVYHAVWY-GSQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLC 579 (783)
Q Consensus 501 e~~~~~y~i~~~LG~G~fG~Vy~a~~~-~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~ 579 (783)
....++|++.+.||+|+||.||+|.+. .++.||||++..........+.+.+|+.+++.++||||+++++++...+.+|
T Consensus 11 ~~~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~ 90 (328)
T 3fe3_A 11 QPHIGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLY 90 (328)
T ss_dssp CCEETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred CCccCCEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEE
Confidence 445679999999999999999999984 4678999999888777777788999999999999999999999999999999
Q ss_pred EEEEecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCcccccc
Q 003963 580 IVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHET 659 (783)
Q Consensus 580 lV~E~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~~~ 659 (783)
+||||+++++|.+++... ..+++..++.++.||+.||+|||+++ |+||||||+|||++.++.+||+|||++......
T Consensus 91 lv~e~~~~~~L~~~l~~~-~~l~~~~~~~~~~qi~~al~~lH~~~--ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~ 167 (328)
T 3fe3_A 91 LIMEYASGGEVFDYLVAH-GRMKEKEARSKFRQIVSAVQYCHQKR--IVHRDLKAENLLLDADMNIKIADFGFSNEFTVG 167 (328)
T ss_dssp EEECCCTTCBHHHHHHHH-CCCCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCCGGGEEECTTSCEEECSTTCCGGGSSS
T ss_pred EEEECCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCC--EeccCCCHHHEEEcCCCCEEEeeccCceecCCC
Confidence 999999999999999764 45899999999999999999999998 999999999999999999999999999765443
Q ss_pred cccccCCCCCCcccCcccccCCCCC-chhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhcccccccCCCCCCHHHHHH
Q 003963 660 YLTTKTGKGTPQWMAPEVLRNEPSD-EKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAAI 738 (783)
Q Consensus 660 ~~~~~~~~Gt~~Y~aPE~~~~~~~s-~~sDIwSLG~il~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~l~~L 738 (783)
. .....+||+.|+|||++.+..+. .++|||||||++|+|++|+.||...+.......+. .....+|..+++++.+|
T Consensus 168 ~-~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~--~~~~~~p~~~s~~~~~l 244 (328)
T 3fe3_A 168 G-KLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVL--RGKYRIPFYMSTDCENL 244 (328)
T ss_dssp C-GGGTTSSSGGGCCHHHHHTCCCCSHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHH--HCCCCCCTTSCHHHHHH
T ss_pred C-ccccccCCcceeCcccccCCCcCCchhhhhhhHHHHHHHHhCCCCCCCCCHHHHHHHHH--hCCCCCCCCCCHHHHHH
Confidence 2 33456899999999999988875 79999999999999999999999988877776653 34556778899999999
Q ss_pred HHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhcCc
Q 003963 739 VESCWHSDPQCRPSFQELVDKLRDLQRQYFQASR 772 (783)
Q Consensus 739 I~~cL~~dP~~RPsa~ell~~L~~L~~~~f~~~~ 772 (783)
|.+||..||.+|||+.++ ++|+||+...
T Consensus 245 i~~~L~~dP~~R~t~~ei------l~h~~~~~~~ 272 (328)
T 3fe3_A 245 LKRFLVLNPIKRGTLEQI------MKDRWINAGH 272 (328)
T ss_dssp HHHHCCSSTTTSCCHHHH------TTCTTTTTTC
T ss_pred HHHHCCCChhHCcCHHHH------hcCHhhcCCC
Confidence 999999999999999999 6789997654
No 22
>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*
Probab=100.00 E-value=1.8e-44 Score=389.72 Aligned_cols=265 Identities=26% Similarity=0.350 Sum_probs=221.2
Q ss_pred cccccceeEeeeeccCCcEEEEEEEEeCCceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEeceeecCCceEE
Q 003963 501 EILWEDLTIGEQIGQGSCGTVYHAVWYGSQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCI 580 (783)
Q Consensus 501 e~~~~~y~i~~~LG~G~fG~Vy~a~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~l 580 (783)
+...++|+++++||+|+||.||+|.+..++.||||++............+.+|+.+++.++||||+++++++.....+++
T Consensus 17 q~l~~~y~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~l 96 (311)
T 3niz_A 17 QGLMEKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHSERCLTL 96 (311)
T ss_dssp ECSSCEEEEEEEEEECSSCEEEEEEETTSCEEEEEEEC------CHHHHHHHHHHHHHHCCCTTBCCEEEEECCSSCEEE
T ss_pred cchHhhhHhhhhccCCCCeEEEEEEECCCCEEEEEEEecccccchhhHHHHHHHHHHHHcCCCCEeeeeeEEccCCEEEE
Confidence 45668999999999999999999999778899999997665555556778899999999999999999999999999999
Q ss_pred EEEecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCccccccc
Q 003963 581 VTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETY 660 (783)
Q Consensus 581 V~E~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~ 660 (783)
||||+++ +|.+++......+++..++.++.||+.||.|||+++ |+||||||+|||++.++.+||+|||++.......
T Consensus 97 v~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~--ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~ 173 (311)
T 3niz_A 97 VFEFMEK-DLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQHR--ILHRDLKPQNLLINSDGALKLADFGLARAFGIPV 173 (311)
T ss_dssp EEECCSE-EHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHHHTT--EECCCCCGGGEEECTTCCEEECCCTTCEETTSCC
T ss_pred EEcCCCC-CHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCC--cccCCCchHhEEECCCCCEEEccCcCceecCCCc
Confidence 9999974 899998877777999999999999999999999998 9999999999999999999999999998765444
Q ss_pred ccccCCCCCCcccCcccccC-CCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccccc---------------
Q 003963 661 LTTKTGKGTPQWMAPEVLRN-EPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQR--------------- 724 (783)
Q Consensus 661 ~~~~~~~Gt~~Y~aPE~~~~-~~~s~~sDIwSLG~il~elltG~~Pf~~~~~~~~~~~i~~~~~~--------------- 724 (783)
.......||+.|+|||++.+ ..++.++|||||||++|+|++|+.||........+..+......
T Consensus 174 ~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 253 (311)
T 3niz_A 174 RSYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNPREWPQVQELPLW 253 (311)
T ss_dssp C---CCCCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSTTTHHHHHHHHHCCCCTTTSGGGTTSHHH
T ss_pred ccccCCcccCCcCCHHHhcCCCCCCchHHhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHCCCChHHhhhhhccchh
Confidence 44445678999999999877 56899999999999999999999999877655444333211100
Q ss_pred -------------ccCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhcCcCC
Q 003963 725 -------------LEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQASRST 774 (783)
Q Consensus 725 -------------~~~~~~~s~~l~~LI~~cL~~dP~~RPsa~ell~~L~~L~~~~f~~~~~~ 774 (783)
..+...+++++.+||.+||..||.+|||+.++ |+|+||+.....
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~el------l~hp~f~~~~~~ 310 (311)
T 3niz_A 254 KQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDA------MNHPYFKDLDPQ 310 (311)
T ss_dssp HSCCCCCCCCCCHHHHSTTCCHHHHHHHHHHSCSCTTTSCCHHHH------HTSGGGTTSCTT
T ss_pred hhcccccccCCcHHHhCcccCHHHHHHHHHHcCCChhHCCCHHHH------hcCcccccCCcc
Confidence 01123577899999999999999999999999 789999987543
No 23
>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...
Probab=100.00 E-value=1.2e-44 Score=396.05 Aligned_cols=258 Identities=24% Similarity=0.444 Sum_probs=226.3
Q ss_pred cccceeEeeeeccCCcEEEEEEEEeC-CceEEEEEEecccC-CHHHHHHHHHHHHHHHhCCCCceeeEeceeecCCceEE
Q 003963 503 LWEDLTIGEQIGQGSCGTVYHAVWYG-SQDVAVKVFSRQEY-SDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCI 580 (783)
Q Consensus 503 ~~~~y~i~~~LG~G~fG~Vy~a~~~~-~~~vAiK~i~~~~~-~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~l 580 (783)
..++|++++.||+|+||.||+|.+.. ++.||||++.+... .......+.+|+.+|+.++||||+++++++...+.+|+
T Consensus 3 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~l 82 (337)
T 1o6l_A 3 TMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCF 82 (337)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEE
T ss_pred ChHHeEEEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcCcceEEEEEeCCEEEE
Confidence 45789999999999999999999864 57799999976432 11234567889999999999999999999999999999
Q ss_pred EEEecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCccccccc
Q 003963 581 VTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETY 660 (783)
Q Consensus 581 V~E~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~ 660 (783)
||||++||+|..++... ..+++..++.++.||+.||+|||+++ |+||||||+||||+.++.+||+|||+++......
T Consensus 83 v~E~~~gg~L~~~l~~~-~~~~~~~~~~~~~qi~~aL~~LH~~~--ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~ 159 (337)
T 1o6l_A 83 VMEYANGGELFFHLSRE-RVFTEERARFYGAEIVSALEYLHSRD--VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDG 159 (337)
T ss_dssp EEECCTTCBHHHHHHHH-SCCCHHHHHHHHHHHHHHHHHHHHTT--CBCCCCCGGGEEECTTSCEEECCCTTCBCSCCTT
T ss_pred EEeCCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCC--eecCcCCHHHEEECCCCCEEEeeccchhhcccCC
Confidence 99999999999999764 46899999999999999999999998 9999999999999999999999999998654444
Q ss_pred ccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhcccccccCCCCCCHHHHHHHH
Q 003963 661 LTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAAIVE 740 (783)
Q Consensus 661 ~~~~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~l~~LI~ 740 (783)
......+||+.|+|||++.+..++.++|||||||++|+|++|..||...+.......+. .....+|..+++++.+||.
T Consensus 160 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~--~~~~~~p~~~s~~~~~li~ 237 (337)
T 1o6l_A 160 ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELIL--MEEIRFPRTLSPEAKSLLA 237 (337)
T ss_dssp CCBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHH--HCCCCCCTTSCHHHHHHHH
T ss_pred CcccccccChhhCChhhhcCCCCCchhhcccchhHHHHHhcCCCCCCCCCHHHHHHHHH--cCCCCCCCCCCHHHHHHHH
Confidence 44556789999999999999999999999999999999999999999888777766653 3455678889999999999
Q ss_pred HhhhhCCCCCC-----CHHHHHHHHHHHHHHHhhcC
Q 003963 741 SCWHSDPQCRP-----SFQELVDKLRDLQRQYFQAS 771 (783)
Q Consensus 741 ~cL~~dP~~RP-----sa~ell~~L~~L~~~~f~~~ 771 (783)
+||..||.+|| ++.++ ++|+||+.+
T Consensus 238 ~lL~~dP~~R~g~~~~~~~ei------~~h~~f~~~ 267 (337)
T 1o6l_A 238 GLLKKDPKQRLGGGPSDAKEV------MEHRFFLSI 267 (337)
T ss_dssp HHTCSSTTTSTTCSTTTHHHH------HTSGGGTTC
T ss_pred HHhhcCHHHhcCCCCCCHHHH------HcCCCcCCC
Confidence 99999999999 89999 678999654
No 24
>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A
Probab=100.00 E-value=6.4e-44 Score=395.15 Aligned_cols=264 Identities=29% Similarity=0.575 Sum_probs=228.6
Q ss_pred cccccccceeEeeeeccCCcEEEEEEEEeC--------CceEEEEEEecccCCHHHHHHHHHHHHHHHhC-CCCceeeEe
Q 003963 499 DYEILWEDLTIGEQIGQGSCGTVYHAVWYG--------SQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRL-RHPNVLLFM 569 (783)
Q Consensus 499 ~~e~~~~~y~i~~~LG~G~fG~Vy~a~~~~--------~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l-~HpnIv~l~ 569 (783)
.+++..++|++++.||+|+||.||+|.+.. +..||||++.... .......+.+|+.+++.+ +|||||+++
T Consensus 75 ~~~~~~~~~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~~hpnIv~~~ 153 (370)
T 2psq_A 75 KWEFPRDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDA-TEKDLSDLVSEMEMMKMIGKHKNIINLL 153 (370)
T ss_dssp TTBCCGGGEEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTC-BHHHHHHHHHHHHHHHHSCCCTTBCCEE
T ss_pred cccccHHHCEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCc-CHHHHHHHHHHHHHHHHhcCCCCEeeEE
Confidence 345667899999999999999999998752 2359999987653 445567899999999999 899999999
Q ss_pred ceeecCCceEEEEEecCCCCHHHHHhhcC---------------CcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCC
Q 003963 570 GAVTSPQRLCIVTEFLPRGSLFRLLQRNT---------------TKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKS 634 (783)
Q Consensus 570 ~~~~~~~~~~lV~E~~~ggsL~~~L~~~~---------------~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp 634 (783)
+++...+.+|+||||+++|+|.+++.... ..+++..++.++.||+.||.|||+++ |+||||||
T Consensus 154 ~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~--ivHrDlkp 231 (370)
T 2psq_A 154 GACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQK--CIHRDLAA 231 (370)
T ss_dssp EEECSSSSCEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHHTT--EECSCCCG
T ss_pred EEEccCCCEEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCC--eeccccch
Confidence 99999999999999999999999997643 24789999999999999999999998 99999999
Q ss_pred CCEEEcCCCcEEEEecCCCccccccc--ccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCCh
Q 003963 635 SNLLVDKHWTVKVGDFGLSRLKHETY--LTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELAT-EKIPWDNLNS 711 (783)
Q Consensus 635 ~NILl~~~~~vkL~DFGla~~~~~~~--~~~~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~ellt-G~~Pf~~~~~ 711 (783)
+||||+.++.+||+|||+++...... .......+|+.|+|||++.+..++.++|||||||++|||++ |..||.....
T Consensus 232 ~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~p~~~~~~ 311 (370)
T 2psq_A 232 RNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPV 311 (370)
T ss_dssp GGEEECTTCCEEECCCSSCEETTCCCTTCTTTTTTSCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCG
T ss_pred hhEEECCCCCEEEccccCCcccCcccceecccCCCcccceECHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCCCCCCH
Confidence 99999999999999999998654322 22334467889999999999999999999999999999999 9999998887
Q ss_pred HHHHHHhhcccccccCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHH
Q 003963 712 MQVIGAVGFMNQRLEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQ 766 (783)
Q Consensus 712 ~~~~~~i~~~~~~~~~~~~~s~~l~~LI~~cL~~dP~~RPsa~ell~~L~~L~~~ 766 (783)
.+....+. .......+..+++++.+||.+||..||.+||++.++++.|+++...
T Consensus 312 ~~~~~~~~-~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rpt~~ell~~L~~il~~ 365 (370)
T 2psq_A 312 EELFKLLK-EGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILTL 365 (370)
T ss_dssp GGHHHHHH-TTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHh-cCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHH
Confidence 76665543 3335667788999999999999999999999999999999998764
No 25
>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*
Probab=100.00 E-value=3.3e-44 Score=385.06 Aligned_cols=260 Identities=27% Similarity=0.449 Sum_probs=226.9
Q ss_pred cccceeEeeeeccCCcEEEEEEEEeC-CceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEeceeecCCceEEE
Q 003963 503 LWEDLTIGEQIGQGSCGTVYHAVWYG-SQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIV 581 (783)
Q Consensus 503 ~~~~y~i~~~LG~G~fG~Vy~a~~~~-~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lV 581 (783)
..++|++.++||+|+||.||+|.+.. ++.||||++....... ...+.+|+.+++.++||||+++++++...+.+|+|
T Consensus 18 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~--~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv 95 (297)
T 3fxz_A 18 PKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPK--KELIINEILVMRENKNPNIVNYLDSYLVGDELWVV 95 (297)
T ss_dssp GGGTBCCCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGCSC--HHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred hhhceeeeeeeccCCCeEEEEEEECCCCcEEEEEEeecccccH--HHHHHHHHHHHhcCCCCCCCeEeEEEEECCEEEEE
Confidence 45789999999999999999999754 5789999997655433 35678899999999999999999999999999999
Q ss_pred EEecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCcccccccc
Q 003963 582 TEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETYL 661 (783)
Q Consensus 582 ~E~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~~ 661 (783)
||||++++|.+++... .+++..++.++.||+.||.|||+++ |+||||||+|||++.++.+||+|||++........
T Consensus 96 ~e~~~~~~L~~~~~~~--~~~~~~~~~~~~qi~~~l~~lH~~~--i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 171 (297)
T 3fxz_A 96 MEYLAGGSLTDVVTET--CMDEGQIAAVCRECLQALEFLHSNQ--VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQS 171 (297)
T ss_dssp EECCTTCBHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHHHTT--EECCCCSGGGEEECTTCCEEECCCTTCEECCSTTC
T ss_pred EECCCCCCHHHHHhhc--CCCHHHHHHHHHHHHHHHHHHHhCC--ceeCCCCHHHEEECCCCCEEEeeCCCceecCCccc
Confidence 9999999999999764 4899999999999999999999998 99999999999999999999999999987665544
Q ss_pred cccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhc-ccccccCCCCCCHHHHHHHH
Q 003963 662 TTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGF-MNQRLEIPKDVDPRWAAIVE 740 (783)
Q Consensus 662 ~~~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~elltG~~Pf~~~~~~~~~~~i~~-~~~~~~~~~~~s~~l~~LI~ 740 (783)
......||+.|+|||++.+..++.++|||||||++|+|++|..||...+.......+.. .......+..+++.+.+||.
T Consensus 172 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~ 251 (297)
T 3fxz_A 172 KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFRDFLN 251 (297)
T ss_dssp CBCCCCSCGGGCCHHHHHCSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHHCSCCCSCGGGSCHHHHHHHH
T ss_pred ccCCccCCcCccChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCCCccccCHHHHHHHH
Confidence 45566899999999999999999999999999999999999999998877665544432 22244556778999999999
Q ss_pred HhhhhCCCCCCCHHHHHHHHHHHHHHHhhcCcCC
Q 003963 741 SCWHSDPQCRPSFQELVDKLRDLQRQYFQASRST 774 (783)
Q Consensus 741 ~cL~~dP~~RPsa~ell~~L~~L~~~~f~~~~~~ 774 (783)
+||+.||.+|||+.++ ++|+||+.....
T Consensus 252 ~~l~~dp~~Rps~~el------l~h~~~~~~~~~ 279 (297)
T 3fxz_A 252 RCLEMDVEKRGSAKEL------LQHQFLKIAKPL 279 (297)
T ss_dssp HHSCSSTTTSCCHHHH------TTCGGGGGCCCG
T ss_pred HHccCChhHCcCHHHH------hhChhhcccCcc
Confidence 9999999999999999 689999876543
No 26
>3zgw_A Maternal embryonic leucine zipper kinase; transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=3e-44 Score=394.37 Aligned_cols=261 Identities=25% Similarity=0.448 Sum_probs=220.4
Q ss_pred cccccccceeEeeeeccCCcEEEEEEEEeC-CceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEeceeecCCc
Q 003963 499 DYEILWEDLTIGEQIGQGSCGTVYHAVWYG-SQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQR 577 (783)
Q Consensus 499 ~~e~~~~~y~i~~~LG~G~fG~Vy~a~~~~-~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~ 577 (783)
.++...++|++.+.||+|+||.||+|.+.. ++.||||++....... ....+.+|+.+++.++||||+++++++...+.
T Consensus 4 ~~~~l~~~y~i~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~-~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~ 82 (347)
T 3zgw_A 4 DYDELLKYYELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGS-DLPRIKTEIEALKNLRHQHICQLYHVLETANK 82 (347)
T ss_dssp CSTTTTTTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESSCC----CCHHHHHHHHHHTCCCTTBCCEEEEEECSSE
T ss_pred cHHHHhcCeEEEEEEEcCCCeEEEEEEECCCCCEEEEEEEEccccch-HHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCE
Confidence 455667899999999999999999999854 5789999997765432 34568899999999999999999999999999
Q ss_pred eEEEEEecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCcccc
Q 003963 578 LCIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKH 657 (783)
Q Consensus 578 ~~lV~E~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~ 657 (783)
+|+|||||++++|.+++... ..+++..++.++.||+.||.|||+++ |+||||||+|||++.++.+||+|||++....
T Consensus 83 ~~lv~E~~~gg~L~~~l~~~-~~l~~~~~~~i~~qi~~aL~~LH~~g--ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~ 159 (347)
T 3zgw_A 83 IFMVLEYCPGGELFDYIISQ-DRLSEEETRVVFRQIVSAVAYVHSQG--YAHRDLKPENLLFDEYHKLKLIDFGLCAKPK 159 (347)
T ss_dssp EEEEEECCTTCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHHTT--CBCCCCCGGGEEECTTSCEEECCCTTCBC--
T ss_pred EEEEEeCCCCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCC--eEeCCccHHHEEEcCCCCEEEEeccCccccc
Confidence 99999999999999999764 35999999999999999999999998 9999999999999999999999999987654
Q ss_pred ccc-ccccCCCCCCcccCcccccCCCC-CchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhcccccccCCCCCCHHH
Q 003963 658 ETY-LTTKTGKGTPQWMAPEVLRNEPS-DEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRW 735 (783)
Q Consensus 658 ~~~-~~~~~~~Gt~~Y~aPE~~~~~~~-s~~sDIwSLG~il~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~l 735 (783)
... ......+||+.|+|||++.+..+ +.++|||||||+||+|++|..||...+.......+. .....+|..+++++
T Consensus 160 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~~~~~~~~i~--~~~~~~p~~~s~~~ 237 (347)
T 3zgw_A 160 GNKDYHLQTCCGSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCGFLPFDDDNVMALYKKIM--RGKYDVPKWLSPSS 237 (347)
T ss_dssp ------------CGGGCCHHHHTTC---CCHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHH--HTCCCCCTTCCHHH
T ss_pred CCCCccccccCCccCccCHHHHcCCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH--cCCCCCCCCCCHHH
Confidence 322 22345679999999999998876 899999999999999999999999988877776663 34567788899999
Q ss_pred HHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhcC
Q 003963 736 AAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQAS 771 (783)
Q Consensus 736 ~~LI~~cL~~dP~~RPsa~ell~~L~~L~~~~f~~~ 771 (783)
.+||.+||..||.+|||+.++ ++|+||+..
T Consensus 238 ~~li~~~L~~dP~~Rps~~ei------l~hp~~~~~ 267 (347)
T 3zgw_A 238 ILLLQQMLQVDPKKRISMKNL------LNHPWIMQD 267 (347)
T ss_dssp HHHHHHHTCSSGGGSCCHHHH------HTCHHHHTT
T ss_pred HHHHHHHcccCHhHCcCHHHH------hcCcchhcC
Confidence 999999999999999999999 678999764
No 27
>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}
Probab=100.00 E-value=1.1e-44 Score=398.75 Aligned_cols=259 Identities=26% Similarity=0.405 Sum_probs=221.2
Q ss_pred ccccceeEeeeeccCCcEEEEEEEEeC-CceEEEEEEecccC-CHHHHHHHHHHHHHHHhC-CCCceeeEeceeecCCce
Q 003963 502 ILWEDLTIGEQIGQGSCGTVYHAVWYG-SQDVAVKVFSRQEY-SDEVIHSFRQEVSLMKRL-RHPNVLLFMGAVTSPQRL 578 (783)
Q Consensus 502 ~~~~~y~i~~~LG~G~fG~Vy~a~~~~-~~~vAiK~i~~~~~-~~~~~~~~~~Ei~il~~l-~HpnIv~l~~~~~~~~~~ 578 (783)
+..++|++.++||+|+||.||+|.++. ++.||||++.+... .......+.+|+.+++.+ +||||+++++++...+.+
T Consensus 20 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~ 99 (353)
T 3txo_A 20 LGIDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPDRL 99 (353)
T ss_dssp ---CCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEE
T ss_pred CchhheEEEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEEeCCEE
Confidence 445789999999999999999999865 56799999976532 123345678899999988 699999999999999999
Q ss_pred EEEEEecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCccccc
Q 003963 579 CIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHE 658 (783)
Q Consensus 579 ~lV~E~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~~ 658 (783)
|+|||||+||+|..++... ..+++..++.++.||+.||+|||+++ |+||||||+||||+.++++||+|||+++....
T Consensus 100 ~lv~E~~~gg~L~~~l~~~-~~~~~~~~~~~~~qi~~aL~~LH~~g--ivHrDlkp~NILl~~~g~ikL~DFG~a~~~~~ 176 (353)
T 3txo_A 100 FFVMEFVNGGDLMFHIQKS-RRFDEARARFYAAEIISALMFLHDKG--IIYRDLKLDNVLLDHEGHCKLADFGMCKEGIC 176 (353)
T ss_dssp EEEEECCCSCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHHTT--CBCCCCCGGGEEECTTSCEEECCCTTCBCSCC
T ss_pred EEEEeCCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCC--CcccCCCHHHEEECCCCCEEEccccceeeccc
Confidence 9999999999999999764 45999999999999999999999998 99999999999999999999999999986554
Q ss_pred ccccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhcccccccCCCCCCHHHHHH
Q 003963 659 TYLTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAAI 738 (783)
Q Consensus 659 ~~~~~~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~l~~L 738 (783)
........+||+.|+|||++.+..++.++|||||||++|+|++|.+||...+..+....+. .....+|..+++.+.+|
T Consensus 177 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~~~i~--~~~~~~p~~~~~~~~~l 254 (353)
T 3txo_A 177 NGVTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAIL--NDEVVYPTWLHEDATGI 254 (353)
T ss_dssp ---------CCGGGCCHHHHHHHHCTTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHH--HCCCCCCTTSCHHHHHH
T ss_pred CCccccccCCCcCeEChhhcCCCCcCCccCCCcchHHHHHHHhCCCCCCCCCHHHHHHHHH--cCCCCCCCCCCHHHHHH
Confidence 4445556789999999999999999999999999999999999999999988888777763 34566788899999999
Q ss_pred HHHhhhhCCCCCCCH------HHHHHHHHHHHHHHhhcC
Q 003963 739 VESCWHSDPQCRPSF------QELVDKLRDLQRQYFQAS 771 (783)
Q Consensus 739 I~~cL~~dP~~RPsa------~ell~~L~~L~~~~f~~~ 771 (783)
|.+||.+||.+||++ .++ ++|+||+.+
T Consensus 255 i~~lL~~dP~~R~~~~~~~~~~~i------l~hp~f~~~ 287 (353)
T 3txo_A 255 LKSFMTKNPTMRLGSLTQGGEHAI------LRHPFFKEI 287 (353)
T ss_dssp HHHHTCSSGGGSTTSGGGTCTHHH------HTSGGGTTC
T ss_pred HHHHhhhCHHHccCCcccCCHHHH------hhCCcccCC
Confidence 999999999999998 777 689999764
No 28
>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=2.2e-43 Score=371.87 Aligned_cols=261 Identities=30% Similarity=0.576 Sum_probs=230.6
Q ss_pred cccccccceeEeeeeccCCcEEEEEEEEeCCceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEeceeecCCce
Q 003963 499 DYEILWEDLTIGEQIGQGSCGTVYHAVWYGSQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRL 578 (783)
Q Consensus 499 ~~e~~~~~y~i~~~LG~G~fG~Vy~a~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~ 578 (783)
.|.+..++|++.+.||+|+||.||+|.+..++.||+|++....... +.+.+|+.+++.++||||+++++++......
T Consensus 4 ~~~i~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~---~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~ 80 (269)
T 4hcu_A 4 KWVIDPSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSE---EDFIEEAEVMMKLSHPKLVQLYGVCLEQAPI 80 (269)
T ss_dssp -CBCCGGGEEEEEEEEECSSCEEEEEEETTTEEEEEEEECTTSBCH---HHHHHHHHHHHTCCCTTBCCEEEEECSSSSE
T ss_pred cEEeChhhceeeheecCCCccEEEEEEecCCCeEEEEEecccccCH---HHHHHHHHHHHhCCCCCEeeEEEEEecCCce
Confidence 4566678999999999999999999999888889999998765544 4678999999999999999999999999999
Q ss_pred EEEEEecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCccccc
Q 003963 579 CIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHE 658 (783)
Q Consensus 579 ~lV~E~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~~ 658 (783)
++||||+++++|.+++......+++..++.++.||+.||.|||+++ |+||||||+|||++.++.+||+|||++.....
T Consensus 81 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~--i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~ 158 (269)
T 4hcu_A 81 CLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEAC--VIHRDLAARNCLVGENQVIKVSDFGMTRFVLD 158 (269)
T ss_dssp EEEEECCTTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCCGGGEEECGGGCEEECCTTGGGGBCC
T ss_pred EEEEEeCCCCcHHHHHHhcCcccCHHHHHHHHHHHHHHHHHHHhCC--eecCCcchheEEEcCCCCEEeccccccccccc
Confidence 9999999999999999877777999999999999999999999998 99999999999999999999999999976544
Q ss_pred cc-ccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCChHHHHHHhhcccccccCCCCCCHHHH
Q 003963 659 TY-LTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELAT-EKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWA 736 (783)
Q Consensus 659 ~~-~~~~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~l~ 736 (783)
.. .......+++.|+|||++.+..++.++|||||||++|+|++ |..||...........+.. ......+..+++.+.
T Consensus 159 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~~g~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 237 (269)
T 4hcu_A 159 DQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDIST-GFRLYKPRLASTHVY 237 (269)
T ss_dssp HHHHSTTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHT-TCCCCCCTTSCHHHH
T ss_pred cccccccCcccccccCCHHHhcCCCCCchhhhHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHhc-CccCCCCCcCCHHHH
Confidence 32 22234456888999999999999999999999999999999 9999999888777666543 234556777899999
Q ss_pred HHHHHhhhhCCCCCCCHHHHHHHHHHHHH
Q 003963 737 AIVESCWHSDPQCRPSFQELVDKLRDLQR 765 (783)
Q Consensus 737 ~LI~~cL~~dP~~RPsa~ell~~L~~L~~ 765 (783)
+||.+||..||.+||++.+++++|+++..
T Consensus 238 ~li~~~l~~~p~~Rps~~~ll~~l~~l~~ 266 (269)
T 4hcu_A 238 QIMNHCWRERPEDRPAFSRLLRQLAEIAE 266 (269)
T ss_dssp HHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHHHHHccCCcccCcCHHHHHHHHHHHHH
Confidence 99999999999999999999999998864
No 29
>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A
Probab=100.00 E-value=3.7e-44 Score=382.15 Aligned_cols=258 Identities=24% Similarity=0.354 Sum_probs=214.9
Q ss_pred cceeEeeeeccCCcEEEEEEEEeCCceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEeceeecCCceEEEEEe
Q 003963 505 EDLTIGEQIGQGSCGTVYHAVWYGSQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIVTEF 584 (783)
Q Consensus 505 ~~y~i~~~LG~G~fG~Vy~a~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lV~E~ 584 (783)
++|++.++||+|+||.||+|.+..++.||+|++............+.+|+.+++.++||||+++++++...+.+++||||
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 81 (288)
T 1ob3_A 2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEH 81 (288)
T ss_dssp CSEEEEEEEEEETTEEEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred ccchhhhhcccCCCEEEEEEEcCCCCEEEEEEEeccccccccchhHHHHHHHHHhcCCCCEeeeeeEEccCCeEEEEEEe
Confidence 68999999999999999999987678899999976544333345678899999999999999999999999999999999
Q ss_pred cCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCccccccccccc
Q 003963 585 LPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETYLTTK 664 (783)
Q Consensus 585 ~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~~~~~ 664 (783)
+++ +|.+++......+++..++.++.||+.||+|||+++ |+||||||+|||++.++.+||+|||++...........
T Consensus 82 ~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~--i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~ 158 (288)
T 1ob3_A 82 LDQ-DLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRR--VLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYT 158 (288)
T ss_dssp CSE-EHHHHHHTSTTCCCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCCGGGEEECTTSCEEECCTTHHHHHCC------
T ss_pred cCC-CHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCC--eecCCCCHHHEEEcCCCCEEEeECccccccCccccccc
Confidence 975 999999876677999999999999999999999998 99999999999999999999999999876554333334
Q ss_pred CCCCCCcccCcccccCC-CCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccccc-------------------
Q 003963 665 TGKGTPQWMAPEVLRNE-PSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQR------------------- 724 (783)
Q Consensus 665 ~~~Gt~~Y~aPE~~~~~-~~s~~sDIwSLG~il~elltG~~Pf~~~~~~~~~~~i~~~~~~------------------- 724 (783)
...||+.|+|||++.+. .++.++|||||||++|+|++|..||...+.......+......
T Consensus 159 ~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (288)
T 1ob3_A 159 HEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPNF 238 (288)
T ss_dssp ---CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTCCTTC
T ss_pred cccccccccCchheeCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHCCCChhhchhhhccccccccc
Confidence 55789999999999764 5899999999999999999999999988776655443211000
Q ss_pred --------ccCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhcC
Q 003963 725 --------LEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQAS 771 (783)
Q Consensus 725 --------~~~~~~~s~~l~~LI~~cL~~dP~~RPsa~ell~~L~~L~~~~f~~~ 771 (783)
......+++++.+||.+||..||.+|||+.++ ++|+||+.+
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~------l~hp~f~~~ 287 (288)
T 1ob3_A 239 TVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQA------LEHAYFKEN 287 (288)
T ss_dssp CCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHH------HTSGGGGC-
T ss_pred ccccCccHHHHhhhcCHHHHHHHHHHcCCCcccCCCHHHH------hcCcchhhc
Confidence 01224578999999999999999999999999 679999864
No 30
>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}
Probab=100.00 E-value=1.4e-43 Score=395.63 Aligned_cols=259 Identities=25% Similarity=0.428 Sum_probs=221.2
Q ss_pred ccccceeEeeeeccCCcEEEEEEEEeC-CceEEEEEEecccCCH-HHHHHHHHHHHHHHhC-CCCceeeEeceeecCCce
Q 003963 502 ILWEDLTIGEQIGQGSCGTVYHAVWYG-SQDVAVKVFSRQEYSD-EVIHSFRQEVSLMKRL-RHPNVLLFMGAVTSPQRL 578 (783)
Q Consensus 502 ~~~~~y~i~~~LG~G~fG~Vy~a~~~~-~~~vAiK~i~~~~~~~-~~~~~~~~Ei~il~~l-~HpnIv~l~~~~~~~~~~ 578 (783)
+..++|+++++||+|+||.||+|.++. ++.||||++.+..... .....+.+|..++..+ +|||||++++++.....+
T Consensus 49 ~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~ 128 (396)
T 4dc2_A 49 LGLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRL 128 (396)
T ss_dssp CCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEECSSEE
T ss_pred CChhHcEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEECCEE
Confidence 445789999999999999999999875 4679999998765433 3445677899999887 899999999999999999
Q ss_pred EEEEEecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCccccc
Q 003963 579 CIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHE 658 (783)
Q Consensus 579 ~lV~E~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~~ 658 (783)
|+|||||+||+|..++... ..+++..++.++.||+.||.|||+++ |+||||||+||||+.++.+||+|||+++....
T Consensus 129 ~lV~E~~~gg~L~~~l~~~-~~l~~~~~~~~~~qi~~aL~~LH~~g--ivHrDLKp~NILl~~~g~ikL~DFGla~~~~~ 205 (396)
T 4dc2_A 129 FFVIEYVNGGDLMFHMQRQ-RKLPEEHARFYSAEISLALNYLHERG--IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLR 205 (396)
T ss_dssp EEEEECCTTCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHHTT--CBCCCCCGGGEEECTTSCEEECCCTTCBCCCC
T ss_pred EEEEEcCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCC--EEeccCCHHHEEECCCCCEEEeecceeeeccc
Confidence 9999999999999999764 46999999999999999999999999 99999999999999999999999999986444
Q ss_pred ccccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCC---------hHHHHHHhhcccccccCCC
Q 003963 659 TYLTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLN---------SMQVIGAVGFMNQRLEIPK 729 (783)
Q Consensus 659 ~~~~~~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~elltG~~Pf~~~~---------~~~~~~~i~~~~~~~~~~~ 729 (783)
........+||+.|+|||++.+..++.++|||||||++|+|++|++||.... .......+ ......+|.
T Consensus 206 ~~~~~~~~~gt~~Y~aPE~l~~~~~~~~~DiwslGvllyell~G~~Pf~~~~~~~~~~~~~~~~~~~~i--~~~~~~~p~ 283 (396)
T 4dc2_A 206 PGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVI--LEKQIRIPR 283 (396)
T ss_dssp TTCCBCCCCBCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSTTTTC------CCHHHHHHHH--HHCCCCCCT
T ss_pred CCCccccccCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCcccccccccchhhHHHHHHHH--hccccCCCC
Confidence 4445567789999999999999999999999999999999999999996432 11222222 344567888
Q ss_pred CCCHHHHHHHHHhhhhCCCCCCCH------HHHHHHHHHHHHHHhhcC
Q 003963 730 DVDPRWAAIVESCWHSDPQCRPSF------QELVDKLRDLQRQYFQAS 771 (783)
Q Consensus 730 ~~s~~l~~LI~~cL~~dP~~RPsa------~ell~~L~~L~~~~f~~~ 771 (783)
.+++++.+||.+||++||.+||++ .++ +.|+||+.+
T Consensus 284 ~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~ei------~~Hpff~~i 325 (396)
T 4dc2_A 284 SLSVKAASVLKSFLNKDPKERLGCHPQTGFADI------QGHPFFRNV 325 (396)
T ss_dssp TSCHHHHHHHHHHTCSCTTTSTTCSTTTHHHHH------HHSTTTTTC
T ss_pred cCCHHHHHHHHHHhcCCHhHcCCCCCCCCHHHH------hcCccccCC
Confidence 999999999999999999999985 555 689999765
No 31
>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*
Probab=100.00 E-value=1.5e-43 Score=385.22 Aligned_cols=259 Identities=22% Similarity=0.356 Sum_probs=215.1
Q ss_pred ccccceeEeeeeccCCcEEEEEEEEe----CCceEEEEEEecccCC--HHHHHHHHHHHHHHHhCCCCceeeEeceeecC
Q 003963 502 ILWEDLTIGEQIGQGSCGTVYHAVWY----GSQDVAVKVFSRQEYS--DEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSP 575 (783)
Q Consensus 502 ~~~~~y~i~~~LG~G~fG~Vy~a~~~----~~~~vAiK~i~~~~~~--~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~ 575 (783)
+..++|++.+.||+|+||.||+|.+. .++.||||++.+.... ......+.+|+.+|+.++||||+++++++...
T Consensus 14 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~ 93 (327)
T 3a62_A 14 IRPECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTG 93 (327)
T ss_dssp CCGGGEEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEEEECS
T ss_pred CCHHHeEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEEEcC
Confidence 45578999999999999999999974 4678999999765432 23345678899999999999999999999999
Q ss_pred CceEEEEEecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCcc
Q 003963 576 QRLCIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRL 655 (783)
Q Consensus 576 ~~~~lV~E~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~ 655 (783)
+.+|+|||||++++|.+++... ..+++..++.++.||+.||.|||+++ |+||||||+||||+.++.+||+|||+++.
T Consensus 94 ~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~al~~lH~~~--ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~ 170 (327)
T 3a62_A 94 GKLYLILEYLSGGELFMQLERE-GIFMEDTACFYLAEISMALGHLHQKG--IIYRDLKPENIMLNHQGHVKLTDFGLCKE 170 (327)
T ss_dssp SCEEEEEECCTTEEHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHHTT--CCCCCCCTTTEEECTTSCEEECCCSCC--
T ss_pred CEEEEEEeCCCCCcHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHhCC--EEcccCCHHHeEECCCCcEEEEeCCcccc
Confidence 9999999999999999999764 35889999999999999999999998 99999999999999999999999999976
Q ss_pred cccccccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhcccccccCCCCCCHHH
Q 003963 656 KHETYLTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRW 735 (783)
Q Consensus 656 ~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~l 735 (783)
...........+||+.|+|||++.+..++.++|||||||++|+|++|..||...+.......+. .....+|..+++++
T Consensus 171 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~--~~~~~~p~~~~~~~ 248 (327)
T 3a62_A 171 SIHDGTVTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKIL--KCKLNLPPYLTQEA 248 (327)
T ss_dssp --------CTTSSCCTTSCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHH--HTCCCCCTTSCHHH
T ss_pred cccCCccccccCCCcCccCHhhCcCCCCCCcccchhHHHHHHHHHHCCCCCCCCCHHHHHHHHH--hCCCCCCCCCCHHH
Confidence 5443333445679999999999999999999999999999999999999999888777666653 33556778899999
Q ss_pred HHHHHHhhhhCCCCCC-----CHHHHHHHHHHHHHHHhhcC
Q 003963 736 AAIVESCWHSDPQCRP-----SFQELVDKLRDLQRQYFQAS 771 (783)
Q Consensus 736 ~~LI~~cL~~dP~~RP-----sa~ell~~L~~L~~~~f~~~ 771 (783)
.+||.+||..||.+|| ++.++ ++|+||+.+
T Consensus 249 ~~li~~~L~~dp~~R~~~~~~~~~e~------l~hp~f~~~ 283 (327)
T 3a62_A 249 RDLLKKLLKRNAASRLGAGPGDAGEV------QAHPFFRHI 283 (327)
T ss_dssp HHHHHHHSCSCGGGSTTSSTTTHHHH------HHSGGGSSC
T ss_pred HHHHHHHHhcCHhhccCCCCCCHHHH------HcCCcccCC
Confidence 9999999999999999 78888 779999754
No 32
>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}
Probab=100.00 E-value=3.1e-43 Score=382.52 Aligned_cols=264 Identities=32% Similarity=0.508 Sum_probs=228.4
Q ss_pred cccccccceeEeeeeccCCcEEEEEEEEeC----CceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEeceeec
Q 003963 499 DYEILWEDLTIGEQIGQGSCGTVYHAVWYG----SQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTS 574 (783)
Q Consensus 499 ~~e~~~~~y~i~~~LG~G~fG~Vy~a~~~~----~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~ 574 (783)
..++..++|++.+.||+|+||.||+|.+.. +..||||++.... .....+.+.+|+.+++.++||||+++++++..
T Consensus 43 ~~~~~~~~y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~ 121 (325)
T 3kul_A 43 TREIEASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGY-TERQRRDFLSEASIMGQFDHPNIIRLEGVVTR 121 (325)
T ss_dssp CCBCCGGGEEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTC-CHHHHHHHHHHHHHHTTCCCTTBCCEEEEECG
T ss_pred ccccChhHeEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCC-CHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEe
Confidence 345667899999999999999999999853 2359999997543 45556789999999999999999999999999
Q ss_pred CCceEEEEEecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCc
Q 003963 575 PQRLCIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSR 654 (783)
Q Consensus 575 ~~~~~lV~E~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~ 654 (783)
.+.+|+||||+++++|.+++......+++..++.++.||+.||.|||+++ |+||||||+||||+.++.+||+|||++.
T Consensus 122 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~--ivH~Dlkp~NIll~~~~~~kl~Dfg~a~ 199 (325)
T 3kul_A 122 GRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYLSDLG--YVHRDLAARNVLVDSNLVCKVSDFGLSR 199 (325)
T ss_dssp GGCCEEEEECCTTCBHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHHHTT--EECSCCSGGGEEECTTCCEEECCCSSCE
T ss_pred CCccEEEeeCCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCC--eeCCCCCcceEEECCCCCEEECCCCccc
Confidence 99999999999999999999876677999999999999999999999998 9999999999999999999999999998
Q ss_pred ccccccc---cccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCChHHHHHHhhcccccccCCCC
Q 003963 655 LKHETYL---TTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELAT-EKIPWDNLNSMQVIGAVGFMNQRLEIPKD 730 (783)
Q Consensus 655 ~~~~~~~---~~~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~ 730 (783)
....... ......+|+.|+|||++.+..++.++|||||||++|+|++ |..||...........+.. ......+..
T Consensus 200 ~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~~~~~~-~~~~~~~~~ 278 (325)
T 3kul_A 200 VLEDDPDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRDVISSVEE-GYRLPAPMG 278 (325)
T ss_dssp ECC----CCEECC---CCGGGSCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTSCHHHHHHHHHT-TCCCCCCTT
T ss_pred ccccCccceeeccCCCCcccccCHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCcccCCHHHHHHHHHc-CCCCCCCCC
Confidence 6544321 2223346788999999999999999999999999999999 9999999888877766543 345567788
Q ss_pred CCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHH
Q 003963 731 VDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQ 766 (783)
Q Consensus 731 ~s~~l~~LI~~cL~~dP~~RPsa~ell~~L~~L~~~ 766 (783)
+++.+.+||..||..||.+||++.++++.|+.+...
T Consensus 279 ~~~~l~~li~~~l~~dp~~Rps~~eil~~L~~l~~~ 314 (325)
T 3kul_A 279 CPHALHQLMLDCWHKDRAQRPRFSQIVSVLDALIRS 314 (325)
T ss_dssp CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHS
T ss_pred cCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhC
Confidence 999999999999999999999999999999988654
No 33
>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}
Probab=100.00 E-value=1.7e-43 Score=378.78 Aligned_cols=258 Identities=26% Similarity=0.408 Sum_probs=215.2
Q ss_pred cccceeEeeeeccCCcEEEEEEEEeC-CceEEEEEEecccCCH------------------------HHHHHHHHHHHHH
Q 003963 503 LWEDLTIGEQIGQGSCGTVYHAVWYG-SQDVAVKVFSRQEYSD------------------------EVIHSFRQEVSLM 557 (783)
Q Consensus 503 ~~~~y~i~~~LG~G~fG~Vy~a~~~~-~~~vAiK~i~~~~~~~------------------------~~~~~~~~Ei~il 557 (783)
..++|++.+.||+|+||.||+|.+.. ++.||||++....... ...+.+.+|+.++
T Consensus 11 ~~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l 90 (298)
T 2zv2_A 11 QLNQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAIL 90 (298)
T ss_dssp EETTEEEEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHH
T ss_pred eecceEEEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHH
Confidence 35789999999999999999999865 5679999997654221 1235688999999
Q ss_pred HhCCCCceeeEeceeec--CCceEEEEEecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCC
Q 003963 558 KRLRHPNVLLFMGAVTS--PQRLCIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSS 635 (783)
Q Consensus 558 ~~l~HpnIv~l~~~~~~--~~~~~lV~E~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~ 635 (783)
+.++||||+++++++.. ...+|+||||+++++|.+++.. ..+++..++.++.||+.||+|||+++ |+||||||+
T Consensus 91 ~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~--ivH~Dlkp~ 166 (298)
T 2zv2_A 91 KKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTL--KPLSEDQARFYFQDLIKGIEYLHYQK--IIHRDIKPS 166 (298)
T ss_dssp HTCCCTTBCCEEEEEECSSSSEEEEEEECCTTCBSCCSSCS--SCCCHHHHHHHHHHHHHHHHHHHHTT--EECCCCCGG
T ss_pred HhCCCCCCCeEEEEEEcCCCCEEEEEEecCCCCcHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHHHCC--eeccCCCHH
Confidence 99999999999999986 5678999999999999887643 46899999999999999999999998 999999999
Q ss_pred CEEEcCCCcEEEEecCCCcccccccccccCCCCCCcccCcccccCCC---CCchhHHHHHHHHHHHHHcCCCCCCCCChH
Q 003963 636 NLLVDKHWTVKVGDFGLSRLKHETYLTTKTGKGTPQWMAPEVLRNEP---SDEKSDVYSFGVILWELATEKIPWDNLNSM 712 (783)
Q Consensus 636 NILl~~~~~vkL~DFGla~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~---~s~~sDIwSLG~il~elltG~~Pf~~~~~~ 712 (783)
||||+.++.+||+|||++..............||+.|+|||++.+.. .+.++|||||||++|+|++|..||......
T Consensus 167 Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~ 246 (298)
T 2zv2_A 167 NLLVGEDGHIKIADFGVSNEFKGSDALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDERIM 246 (298)
T ss_dssp GEEECTTSCEEECCCTTCEECSSSSCEECCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHHHHHHHSSCSSCCSSHH
T ss_pred HEEECCCCCEEEecCCCccccccccccccCCcCCccccChhhhccCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCccHH
Confidence 99999999999999999987655433344567999999999998765 378899999999999999999999988776
Q ss_pred HHHHHhhcccccccCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhc
Q 003963 713 QVIGAVGFMNQRLEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQA 770 (783)
Q Consensus 713 ~~~~~i~~~~~~~~~~~~~s~~l~~LI~~cL~~dP~~RPsa~ell~~L~~L~~~~f~~ 770 (783)
.....+.......+....+++++.+||.+||..||.+||++.++ ++|+||+.
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~R~s~~e~------l~hp~~~~ 298 (298)
T 2zv2_A 247 CLHSKIKSQALEFPDQPDIAEDLKDLITRMLDKNPESRIVVPEI------KLHPWVTR 298 (298)
T ss_dssp HHHHHHHHCCCCCCSSSCCCHHHHHHHHHHTCSCTTTSCCHHHH------TTCHHHHC
T ss_pred HHHHHHhcccCCCCCccccCHHHHHHHHHHhhcChhhCCCHHHH------hcCccccC
Confidence 66655543333344446789999999999999999999999999 67899863
No 34
>3lb7_A RAF proto-oncogene serine/threonine-protein kinas; kinase domain, alternative splicing, ATP-binding, disease MU kinase, metal-binding; 4.00A {Homo sapiens} PDB: 3omv_A*
Probab=100.00 E-value=2.7e-43 Score=379.83 Aligned_cols=267 Identities=36% Similarity=0.599 Sum_probs=224.0
Q ss_pred ccccccccceeEeeeeccCCcEEEEEEEEeCCceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEeceeecCCc
Q 003963 498 LDYEILWEDLTIGEQIGQGSCGTVYHAVWYGSQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQR 577 (783)
Q Consensus 498 ~~~e~~~~~y~i~~~LG~G~fG~Vy~a~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~ 577 (783)
..+++..++|++.++||+|+||.||+|.+. ..+++|+++.........+.+.+|+.+++.++||||+++++++. .+.
T Consensus 29 ~~~~i~~~~~~~~~~lG~G~~g~Vy~~~~~--~~~avk~~k~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-~~~ 105 (307)
T 3lb7_A 29 YYWEIEASEVMLSTRIGSGSFGTVYKGKWH--GDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMT-KDN 105 (307)
T ss_dssp CCCBCCTTSCCEEEEEEECSSCEEEEEESS--SEEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSS
T ss_pred ceEEecccceEEEeEecCCCCeEEEEEEEC--CEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEc-cCc
Confidence 456777889999999999999999999754 36999998877767777788999999999999999999999875 456
Q ss_pred eEEEEEecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCcccc
Q 003963 578 LCIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKH 657 (783)
Q Consensus 578 ~~lV~E~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~ 657 (783)
+++||||+.+++|.+++......+++..++.++.||+.||+|||+++ |+||||||+||||+.++.+||+|||++....
T Consensus 106 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~--ivH~Dlkp~NIll~~~~~~kl~DFg~a~~~~ 183 (307)
T 3lb7_A 106 LAIVTQWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLHAKN--IIHRDMKSNNIFLHEGLTVKIGDFGLATVKS 183 (307)
T ss_dssp CEEEEECCSSCBHHHHHHTSCCCCCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCCSSSEEECTTSCEEECCCCSSCC--
T ss_pred EEEEEecCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCC--EeeCCCChhhEEEcCCCCEEEccCCCceecc
Confidence 89999999999999999877778999999999999999999999998 9999999999999999999999999997544
Q ss_pred cc--cccccCCCCCCcccCccccc---CCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHh-hcccc---cccCC
Q 003963 658 ET--YLTTKTGKGTPQWMAPEVLR---NEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAV-GFMNQ---RLEIP 728 (783)
Q Consensus 658 ~~--~~~~~~~~Gt~~Y~aPE~~~---~~~~s~~sDIwSLG~il~elltG~~Pf~~~~~~~~~~~i-~~~~~---~~~~~ 728 (783)
.. ........||+.|+|||++. +..++.++|||||||++|+|++|+.||...+........ ..... ...++
T Consensus 184 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (307)
T 3lb7_A 184 RWSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQIIFMVGRGYASPDLSKLY 263 (307)
T ss_dssp ----------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHHHTCCCCCSTTSC
T ss_pred cccccccccCCCCCcceECcceeeccCCCCCCchhhHHHHHHHHHHHHhCCCCCccCCcHHHHHHHHhcCCCCcchhhhh
Confidence 21 22233457999999999986 667889999999999999999999999877655443322 11111 22344
Q ss_pred CCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhh
Q 003963 729 KDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQ 769 (783)
Q Consensus 729 ~~~s~~l~~LI~~cL~~dP~~RPsa~ell~~L~~L~~~~f~ 769 (783)
..+++.+.+||.+||+.+|.+||++.++++.|+.+++.+-+
T Consensus 264 ~~~~~~l~~li~~~l~~~p~~RPs~~~il~~l~~l~~~~pk 304 (307)
T 3lb7_A 264 KNCPKAMKRLVADCVKKVKEERPLFPQILSSIELLQHSLPK 304 (307)
T ss_dssp SSSCHHHHHHHHHHSCSSSTTSCCHHHHHHHHHHHHTTCCC
T ss_pred cCCcHHHHHHHHHHhhCChhhCcCHHHHHHHHHHHHhhccc
Confidence 67899999999999999999999999999999999877644
No 35
>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*
Probab=100.00 E-value=2.6e-43 Score=386.64 Aligned_cols=258 Identities=26% Similarity=0.426 Sum_probs=222.3
Q ss_pred cccceeEeeeeccCCcEEEEEEEEeC-CceEEEEEEecccC-CHHHHHHHHHHHHHHHhC-CCCceeeEeceeecCCceE
Q 003963 503 LWEDLTIGEQIGQGSCGTVYHAVWYG-SQDVAVKVFSRQEY-SDEVIHSFRQEVSLMKRL-RHPNVLLFMGAVTSPQRLC 579 (783)
Q Consensus 503 ~~~~y~i~~~LG~G~fG~Vy~a~~~~-~~~vAiK~i~~~~~-~~~~~~~~~~Ei~il~~l-~HpnIv~l~~~~~~~~~~~ 579 (783)
..++|++++.||+|+||.||+|.+.. ++.||||++.+... .......+.+|+.+++.+ +|||||++++++.....+|
T Consensus 7 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~ 86 (345)
T 3a8x_A 7 GLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLF 86 (345)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEE
T ss_pred chhheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEeCCEEE
Confidence 45789999999999999999999865 56799999987654 345567788999999988 8999999999999999999
Q ss_pred EEEEecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCcccccc
Q 003963 580 IVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHET 659 (783)
Q Consensus 580 lV~E~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~~~ 659 (783)
+||||+++|+|.+++... ..+++..++.++.||+.||.|||+++ |+||||||+||||+.++++||+|||+++.....
T Consensus 87 lv~e~~~gg~L~~~l~~~-~~l~~~~~~~~~~qi~~aL~~LH~~~--ivHrDlkp~NIll~~~g~~kL~DFG~a~~~~~~ 163 (345)
T 3a8x_A 87 FVIEYVNGGDLMFHMQRQ-RKLPEEHARFYSAEISLALNYLHERG--IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRP 163 (345)
T ss_dssp EEECCCCSCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHHTT--CBCCCCCGGGEEECTTSCEEECCGGGCBCSCCT
T ss_pred EEEeCCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCC--ceecCCCHHHEEECCCCCEEEEeccccccccCC
Confidence 999999999999999764 46999999999999999999999998 999999999999999999999999999864444
Q ss_pred cccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCC---------ChHHHHHHhhcccccccCCCC
Q 003963 660 YLTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNL---------NSMQVIGAVGFMNQRLEIPKD 730 (783)
Q Consensus 660 ~~~~~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~elltG~~Pf~~~---------~~~~~~~~i~~~~~~~~~~~~ 730 (783)
.......+||+.|+|||++.+..++.++|||||||++|+|++|..||... ........+ ......+|..
T Consensus 164 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~i--~~~~~~~p~~ 241 (345)
T 3a8x_A 164 GDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVI--LEKQIRIPRS 241 (345)
T ss_dssp TCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTTTC-------CHHHHHHHH--HHCCCCCCTT
T ss_pred CCcccccCCCccccCccccCCCCCChHHhHHHHHHHHHHHHhCCCCcCCcccccccccccHHHHHHHH--HcCCCCCCCC
Confidence 34455678999999999999999999999999999999999999999652 122222222 2345667888
Q ss_pred CCHHHHHHHHHhhhhCCCCCCCH------HHHHHHHHHHHHHHhhcC
Q 003963 731 VDPRWAAIVESCWHSDPQCRPSF------QELVDKLRDLQRQYFQAS 771 (783)
Q Consensus 731 ~s~~l~~LI~~cL~~dP~~RPsa------~ell~~L~~L~~~~f~~~ 771 (783)
+++++.+||.+||..||.+||++ .++ +.|+||+.+
T Consensus 242 ~s~~~~~li~~lL~~dP~~R~~~~~~~~~~~i------~~hp~f~~~ 282 (345)
T 3a8x_A 242 LSVKAASVLKSFLNKDPKERLGCHPQTGFADI------QGHPFFRNV 282 (345)
T ss_dssp SCHHHHHHHHHHTCSSTTTSTTCCTTTHHHHH------HTSGGGTTC
T ss_pred CCHHHHHHHHHHhcCCHhHCCCCCCcCCHHHH------hcCCccCCC
Confidence 99999999999999999999985 566 689999754
No 36
>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7
Probab=100.00 E-value=1.6e-43 Score=383.97 Aligned_cols=255 Identities=24% Similarity=0.437 Sum_probs=224.1
Q ss_pred cccceeEeeeeccCCcEEEEEEEEeC-CceEEEEEEecccCCH-HHHHHHHHHHHHHHhCCCCceeeEeceeecCCceEE
Q 003963 503 LWEDLTIGEQIGQGSCGTVYHAVWYG-SQDVAVKVFSRQEYSD-EVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCI 580 (783)
Q Consensus 503 ~~~~y~i~~~LG~G~fG~Vy~a~~~~-~~~vAiK~i~~~~~~~-~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~l 580 (783)
..++|++.+.||+|+||.||+|.+.. ++.||||++.+..... .....+.+|+.+++.++||||+++++++.+...+|+
T Consensus 4 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~l 83 (318)
T 1fot_A 4 SLQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFM 83 (318)
T ss_dssp CGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEE
T ss_pred ChHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCceEeEEEEeCCEEEE
Confidence 35789999999999999999999864 5789999997643211 234567889999999999999999999999999999
Q ss_pred EEEecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCccccccc
Q 003963 581 VTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETY 660 (783)
Q Consensus 581 V~E~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~ 660 (783)
||||++||+|.+++... ..+++..++.++.||+.||.|||+++ |+||||||+|||++.+|.+||+|||+++.....
T Consensus 84 v~e~~~gg~L~~~l~~~-~~~~~~~~~~~~~qi~~aL~~LH~~~--ivHrDlkp~NIll~~~g~~kL~Dfg~a~~~~~~- 159 (318)
T 1fot_A 84 IMDYIEGGELFSLLRKS-QRFPNPVAKFYAAEVCLALEYLHSKD--IIYRDLKPENILLDKNGHIKITDFGFAKYVPDV- 159 (318)
T ss_dssp EECCCCSCBHHHHHHHT-SSCCHHHHHHHHHHHHHHHHHHHTTT--EECCCCCGGGEEECTTSCEEECCCSSCEECSSC-
T ss_pred EEeCCCCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCC--ccccCCChheEEEcCCCCEEEeecCcceecCCc-
Confidence 99999999999999764 46899999999999999999999998 999999999999999999999999999865432
Q ss_pred ccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhcccccccCCCCCCHHHHHHHH
Q 003963 661 LTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAAIVE 740 (783)
Q Consensus 661 ~~~~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~l~~LI~ 740 (783)
....+||+.|+|||++.+..++.++|||||||++|+|++|..||...+.......+. .....+|..+++++.+||.
T Consensus 160 --~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~--~~~~~~p~~~~~~~~~li~ 235 (318)
T 1fot_A 160 --TYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKIL--NAELRFPPFFNEDVKDLLS 235 (318)
T ss_dssp --BCCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHH--HCCCCCCTTSCHHHHHHHH
T ss_pred --cccccCCccccCHhHhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHH--hCCCCCCCCCCHHHHHHHH
Confidence 335689999999999999999999999999999999999999999888877766653 3345677889999999999
Q ss_pred HhhhhCCCCCC-----CHHHHHHHHHHHHHHHhhcC
Q 003963 741 SCWHSDPQCRP-----SFQELVDKLRDLQRQYFQAS 771 (783)
Q Consensus 741 ~cL~~dP~~RP-----sa~ell~~L~~L~~~~f~~~ 771 (783)
+||..||.+|| ++.++ +.|+||+.+
T Consensus 236 ~lL~~dp~~R~~~~~~~~~~i------~~hp~f~~~ 265 (318)
T 1fot_A 236 RLITRDLSQRLGNLQNGTEDV------KNHPWFKEV 265 (318)
T ss_dssp HHTCSCTTTCTTSSTTTTHHH------HTSGGGSSC
T ss_pred HHhccCHHHcCCCcCCCHHHH------hcCccccCC
Confidence 99999999999 88998 678999653
No 37
>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A
Probab=100.00 E-value=3.4e-43 Score=375.19 Aligned_cols=258 Identities=24% Similarity=0.343 Sum_probs=219.0
Q ss_pred cceeEeeeeccCCcEEEEEEEEeC-CceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEeceeecCCceEEEEE
Q 003963 505 EDLTIGEQIGQGSCGTVYHAVWYG-SQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIVTE 583 (783)
Q Consensus 505 ~~y~i~~~LG~G~fG~Vy~a~~~~-~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lV~E 583 (783)
++|++.++||+|+||.||+|.+.. ++.||||++............+.+|+.+++.++||||+++++++...+.+++|||
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 81 (292)
T 3o0g_A 2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFE 81 (292)
T ss_dssp CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred CCceeeeEecCCCCeEEEEEEECCCCceEEEEeeeccCCcCCcchHHHHHHHHHhcCCCCCEeeEEeEEEeCCEEEEEEe
Confidence 689999999999999999999865 5679999998776666666788899999999999999999999999999999999
Q ss_pred ecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCcccccccccc
Q 003963 584 FLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETYLTT 663 (783)
Q Consensus 584 ~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~~~~ 663 (783)
|+++ +|.+++......+++..++.++.||+.||+|||++| |+||||||+|||++.++.+||+|||++..........
T Consensus 82 ~~~~-~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~--ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~ 158 (292)
T 3o0g_A 82 FCDQ-DLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRN--VLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRCY 158 (292)
T ss_dssp CCSE-EHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTT--EECCCCSGGGEEECTTSCEEECCCTTCEECCSCCSCC
T ss_pred cCCC-CHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCC--eecCCCCHHHEEEcCCCCEEEeecccceecCCccccc
Confidence 9965 777777666677999999999999999999999998 9999999999999999999999999998766554445
Q ss_pred cCCCCCCcccCcccccCCC-CCchhHHHHHHHHHHHHHcCCCC-CCCCChHHHHHHhhcccc------------------
Q 003963 664 KTGKGTPQWMAPEVLRNEP-SDEKSDVYSFGVILWELATEKIP-WDNLNSMQVIGAVGFMNQ------------------ 723 (783)
Q Consensus 664 ~~~~Gt~~Y~aPE~~~~~~-~s~~sDIwSLG~il~elltG~~P-f~~~~~~~~~~~i~~~~~------------------ 723 (783)
....||+.|+|||++.+.. ++.++|||||||++|+|++|..| |...+....+..+.....
T Consensus 159 ~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~~~~p~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 238 (292)
T 3o0g_A 159 SAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYKP 238 (292)
T ss_dssp CSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHHHHHHHHHHHCCCCTTTCTTGGGSTTCCC
T ss_pred cCCccccCCcChHHHcCCCCcCchHHHHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCCCChhhhhhhcccccccc
Confidence 5667899999999998766 79999999999999999988777 555555544443321110
Q ss_pred ---------cccCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhcC
Q 003963 724 ---------RLEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQAS 771 (783)
Q Consensus 724 ---------~~~~~~~~s~~l~~LI~~cL~~dP~~RPsa~ell~~L~~L~~~~f~~~ 771 (783)
.......+++.+.+||.+||+.||.+|||+.++ ++|+||+..
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~------l~hp~f~~~ 289 (292)
T 3o0g_A 239 YPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEA------LQHPYFSDF 289 (292)
T ss_dssp CCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHH------HTSGGGTTC
T ss_pred cccccCCcchhhcccccChHHHHHHHHHhccChhhCCCHHHH------hcCcccccC
Confidence 011223578999999999999999999999999 789999864
No 38
>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*
Probab=100.00 E-value=1.2e-43 Score=390.63 Aligned_cols=259 Identities=24% Similarity=0.401 Sum_probs=224.7
Q ss_pred ccccceeEeeeeccCCcEEEEEEEEeC-CceEEEEEEecccCC-HHHHHHHHHHHHHHHhC-CCCceeeEeceeecCCce
Q 003963 502 ILWEDLTIGEQIGQGSCGTVYHAVWYG-SQDVAVKVFSRQEYS-DEVIHSFRQEVSLMKRL-RHPNVLLFMGAVTSPQRL 578 (783)
Q Consensus 502 ~~~~~y~i~~~LG~G~fG~Vy~a~~~~-~~~vAiK~i~~~~~~-~~~~~~~~~Ei~il~~l-~HpnIv~l~~~~~~~~~~ 578 (783)
...++|++++.||+|+||.||+|.+.. ++.||||++.+.... ......+..|..++..+ +||||+++++++...+.+
T Consensus 17 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~ 96 (353)
T 2i0e_A 17 MKLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRL 96 (353)
T ss_dssp --CTTEEEEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEECSSEE
T ss_pred CchHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEcCCEE
Confidence 456799999999999999999999876 467999999764321 12345677899999988 799999999999999999
Q ss_pred EEEEEecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCccccc
Q 003963 579 CIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHE 658 (783)
Q Consensus 579 ~lV~E~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~~ 658 (783)
|+|||||+||+|.+++... ..+++..++.++.||+.||.|||++| |+||||||+||||+.++++||+|||+++....
T Consensus 97 ~lv~E~~~gg~L~~~l~~~-~~~~~~~~~~~~~qi~~aL~~LH~~g--ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~ 173 (353)
T 2i0e_A 97 YFVMEYVNGGDLMYHIQQV-GRFKEPHAVFYAAEIAIGLFFLQSKG--IIYRDLKLDNVMLDSEGHIKIADFGMCKENIW 173 (353)
T ss_dssp EEEEECCCSCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHHTT--CBCCCCCGGGEEECTTSCEEECCCTTCBCCCC
T ss_pred EEEEeCCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCC--EEeccCCHHHEEEcCCCcEEEEeCCccccccc
Confidence 9999999999999999764 35999999999999999999999998 99999999999999999999999999986544
Q ss_pred ccccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhcccccccCCCCCCHHHHHH
Q 003963 659 TYLTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAAI 738 (783)
Q Consensus 659 ~~~~~~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~l~~L 738 (783)
........+||+.|+|||++.+..++.++|||||||++|||++|.+||...+.......+. .....+|..+++++.+|
T Consensus 174 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~~~i~--~~~~~~p~~~s~~~~~l 251 (353)
T 2i0e_A 174 DGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIM--EHNVAYPKSMSKEAVAI 251 (353)
T ss_dssp TTCCBCCCCSCGGGCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHH--HCCCCCCTTSCHHHHHH
T ss_pred CCcccccccCCccccChhhhcCCCcCCcccccchHHHHHHHHcCCCCCCCCCHHHHHHHHH--hCCCCCCCCCCHHHHHH
Confidence 4444556789999999999999999999999999999999999999999988877776663 34566788899999999
Q ss_pred HHHhhhhCCCCCCC-----HHHHHHHHHHHHHHHhhcC
Q 003963 739 VESCWHSDPQCRPS-----FQELVDKLRDLQRQYFQAS 771 (783)
Q Consensus 739 I~~cL~~dP~~RPs-----a~ell~~L~~L~~~~f~~~ 771 (783)
|.+||.+||.+||+ +.++ +.|+||+.+
T Consensus 252 i~~lL~~dP~~R~~~~~~~~~~i------~~h~~f~~~ 283 (353)
T 2i0e_A 252 CKGLMTKHPGKRLGCGPEGERDI------KEHAFFRYI 283 (353)
T ss_dssp HHHHTCSCTTSCTTCSTTHHHHH------HTSGGGTTC
T ss_pred HHHHhhcCHHHcCCCCCCCHHHH------hcCccccCC
Confidence 99999999999995 5777 678999654
No 39
>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*
Probab=100.00 E-value=2.8e-43 Score=370.67 Aligned_cols=260 Identities=33% Similarity=0.599 Sum_probs=228.5
Q ss_pred ccccccceeEeeeeccCCcEEEEEEEEeCCceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEeceeecCCceE
Q 003963 500 YEILWEDLTIGEQIGQGSCGTVYHAVWYGSQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLC 579 (783)
Q Consensus 500 ~e~~~~~y~i~~~LG~G~fG~Vy~a~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~ 579 (783)
+++..++|++.+.||+|+||.||++.+.++..||+|++....... ..+.+|+.+++.++||||+++++++......+
T Consensus 3 ~~l~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~---~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~ 79 (268)
T 3sxs_A 3 MELKREEITLLKELGSGQFGVVKLGKWKGQYDVAVKMIKEGSMSE---DEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIY 79 (268)
T ss_dssp TBCCGGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECBTTBCH---HHHHHHHHHHHHCCCTTBCCEEEEECSSSSEE
T ss_pred eEechhheeeeeeeccCCCceEEEEEecCceeEEEEEeccCCCcH---HHHHHHHHHHHhCCCCCEeeEEEEEccCCceE
Confidence 356678999999999999999999998887789999998765544 46789999999999999999999999999999
Q ss_pred EEEEecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCcccccc
Q 003963 580 IVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHET 659 (783)
Q Consensus 580 lV~E~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~~~ 659 (783)
+||||+++++|.+++......+++..++.++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||++......
T Consensus 80 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~--i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~ 157 (268)
T 3sxs_A 80 IVTEYISNGCLLNYLRSHGKGLEPSQLLEMCYDVCEGMAFLESHQ--FIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDD 157 (268)
T ss_dssp EEEECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHTT--EEESSCSGGGEEECTTCCEEECCTTCEEECCTT
T ss_pred EEEEccCCCcHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCC--eecCCcCcceEEECCCCCEEEccCccceecchh
Confidence 999999999999999877667999999999999999999999998 999999999999999999999999999765443
Q ss_pred c-ccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCChHHHHHHhhcccccccCCCCCCHHHHH
Q 003963 660 Y-LTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELAT-EKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAA 737 (783)
Q Consensus 660 ~-~~~~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~l~~ 737 (783)
. .......+|+.|+|||++.+..++.++|||||||++|+|++ |..||...........+. .......+..+++.+.+
T Consensus 158 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~ 236 (268)
T 3sxs_A 158 QYVSSVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNSEVVLKVS-QGHRLYRPHLASDTIYQ 236 (268)
T ss_dssp CEEECCSCCCCGGGCCHHHHHHSEEETTHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHH-TTCCCCCCTTSCHHHHH
T ss_pred hhhcccCCCcCcccCCHHHHhccCCchhhhhHHHHHHHHHHHcCCCCCccccChHHHHHHHH-cCCCCCCCCcChHHHHH
Confidence 2 22233456788999999999889999999999999999999 999999888877665553 23345566778999999
Q ss_pred HHHHhhhhCCCCCCCHHHHHHHHHHHHH
Q 003963 738 IVESCWHSDPQCRPSFQELVDKLRDLQR 765 (783)
Q Consensus 738 LI~~cL~~dP~~RPsa~ell~~L~~L~~ 765 (783)
||.+||..||.+|||+.++++.|+.++.
T Consensus 237 li~~~l~~~p~~Rps~~~ll~~L~~l~~ 264 (268)
T 3sxs_A 237 IMYSCWHELPEKRPTFQQLLSSIEPLRE 264 (268)
T ss_dssp HHHHTTCSSGGGSCCHHHHHHHHGGGCC
T ss_pred HHHHHcCCChhhCcCHHHHHHHHHHhhh
Confidence 9999999999999999999999987754
No 40
>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*
Probab=100.00 E-value=6e-44 Score=391.75 Aligned_cols=259 Identities=25% Similarity=0.426 Sum_probs=224.5
Q ss_pred ccccceeEeeeeccCCcEEEEEEEEeC-CceEEEEEEecccCC-HHHHHHHHHHHHHHHhC-CCCceeeEeceeecCCce
Q 003963 502 ILWEDLTIGEQIGQGSCGTVYHAVWYG-SQDVAVKVFSRQEYS-DEVIHSFRQEVSLMKRL-RHPNVLLFMGAVTSPQRL 578 (783)
Q Consensus 502 ~~~~~y~i~~~LG~G~fG~Vy~a~~~~-~~~vAiK~i~~~~~~-~~~~~~~~~Ei~il~~l-~HpnIv~l~~~~~~~~~~ 578 (783)
...++|++.+.||+|+||.||+|.++. ++.||||++.+.... ......+..|..++..+ +||||+++++++.....+
T Consensus 14 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~~~~ 93 (345)
T 1xjd_A 14 LKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENL 93 (345)
T ss_dssp --CTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEE
T ss_pred CChHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEeCCEE
Confidence 456799999999999999999999865 567999999764321 12235677899999876 899999999999999999
Q ss_pred EEEEEecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCccccc
Q 003963 579 CIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHE 658 (783)
Q Consensus 579 ~lV~E~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~~ 658 (783)
|+|||||+||+|.+++... ..+++..++.++.||+.||+|||++| |+||||||+||||+.++.+||+|||+++....
T Consensus 94 ~lv~E~~~gg~L~~~l~~~-~~~~~~~~~~~~~qi~~aL~~LH~~~--ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~ 170 (345)
T 1xjd_A 94 FFVMEYLNGGDLMYHIQSC-HKFDLSRATFYAAEIILGLQFLHSKG--IVYRDLKLDNILLDKDGHIKIADFGMCKENML 170 (345)
T ss_dssp EEEEECCTTCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHHTT--CBCCCCCGGGEEECTTSCEEECCCTTCBCCCC
T ss_pred EEEEeCCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCC--eEeCCCChhhEEECCCCCEEEeEChhhhhccc
Confidence 9999999999999999764 45899999999999999999999998 99999999999999999999999999986544
Q ss_pred ccccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhcccccccCCCCCCHHHHHH
Q 003963 659 TYLTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAAI 738 (783)
Q Consensus 659 ~~~~~~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~l~~L 738 (783)
........+||+.|+|||++.+..++.++|||||||++|+|++|..||...+.......+.. ....+|..+++++.+|
T Consensus 171 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~--~~~~~p~~~s~~~~~l 248 (345)
T 1xjd_A 171 GDAKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRM--DNPFYPRWLEKEAKDL 248 (345)
T ss_dssp TTCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHH--CCCCCCTTSCHHHHHH
T ss_pred CCCcccCCCCCcccCChhhhcCCCCCChhhhHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHh--CCCCCCcccCHHHHHH
Confidence 33345567899999999999999999999999999999999999999999888777766643 3456778899999999
Q ss_pred HHHhhhhCCCCCCCHH-HHHHHHHHHHHHHhhcC
Q 003963 739 VESCWHSDPQCRPSFQ-ELVDKLRDLQRQYFQAS 771 (783)
Q Consensus 739 I~~cL~~dP~~RPsa~-ell~~L~~L~~~~f~~~ 771 (783)
|.+||..||.+||++. ++ ++|+||+.+
T Consensus 249 i~~lL~~dp~~R~~~~~~i------~~hp~f~~~ 276 (345)
T 1xjd_A 249 LVKLFVREPEKRLGVRGDI------RQHPLFREI 276 (345)
T ss_dssp HHHHSCSSGGGSBTTBSCG------GGSGGGTTC
T ss_pred HHHHhcCCHhHcCCChHHH------HcCccccCC
Confidence 9999999999999997 77 678999765
No 41
>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}
Probab=100.00 E-value=3.6e-43 Score=398.24 Aligned_cols=259 Identities=22% Similarity=0.326 Sum_probs=225.6
Q ss_pred cccceeEeeeeccCCcEEEEEEEEeC-CceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEeceeecCCceEEE
Q 003963 503 LWEDLTIGEQIGQGSCGTVYHAVWYG-SQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIV 581 (783)
Q Consensus 503 ~~~~y~i~~~LG~G~fG~Vy~a~~~~-~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lV 581 (783)
..++|++.++||+|+||.||+|.+.. ++.||+|++............+.+|+.+++.++|||||++++++...+..|+|
T Consensus 9 ~~~~Y~i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lv 88 (444)
T 3soa_A 9 FTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYLI 88 (444)
T ss_dssp HHHHEEEEEEEEEC--CEEEEEEETTTTEEEEEEEEESCSCHHHHHHHHHHHHHHHHHCCBTTBCCEEEEEECSSEEEEE
T ss_pred ccCCeEEEEEeccCCCeEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCcCCCeEEEEEEECCEEEEE
Confidence 45789999999999999999999864 56799999988776666677899999999999999999999999999999999
Q ss_pred EEecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEc---CCCcEEEEecCCCccccc
Q 003963 582 TEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVD---KHWTVKVGDFGLSRLKHE 658 (783)
Q Consensus 582 ~E~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~---~~~~vkL~DFGla~~~~~ 658 (783)
||||.||+|.+++... ..+++..+..++.||+.||.|||+++ |+||||||+|||++ .++.+||+|||++.....
T Consensus 89 ~E~~~gg~L~~~i~~~-~~~~e~~~~~i~~qil~aL~~lH~~g--ivHrDlKp~NIll~~~~~~~~vkL~DFG~a~~~~~ 165 (444)
T 3soa_A 89 FDLVTGGELFEDIVAR-EYYSEADASHCIQQILEAVLHCHQMG--VVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEG 165 (444)
T ss_dssp ECCCBCCBHHHHHHHC-SCCCHHHHHHHHHHHHHHHHHHHHTT--CBCCCCSSTTEEESBSSTTCCEEECCCSSCBCCCT
T ss_pred EEeCCCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCC--ccccCCCHHHEEEeccCCCCcEEEccCceeEEecC
Confidence 9999999999999764 46999999999999999999999998 99999999999998 467899999999987665
Q ss_pred ccccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccccccc--CCCCCCHHHH
Q 003963 659 TYLTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLE--IPKDVDPRWA 736 (783)
Q Consensus 659 ~~~~~~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~elltG~~Pf~~~~~~~~~~~i~~~~~~~~--~~~~~s~~l~ 736 (783)
........+||+.|+|||++.+..++.++|||||||++|+|++|.+||...+.......+.......+ ....+++++.
T Consensus 166 ~~~~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~ 245 (444)
T 3soa_A 166 EQQAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPEAK 245 (444)
T ss_dssp TCCBCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHTCCCCCTTTTTTSCHHHH
T ss_pred CCceeecccCCcccCCHHHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCccHHHHHHHHHhCCCCCCccccccCCHHHH
Confidence 44444566899999999999999999999999999999999999999999888877777654433322 2347899999
Q ss_pred HHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhc
Q 003963 737 AIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQA 770 (783)
Q Consensus 737 ~LI~~cL~~dP~~RPsa~ell~~L~~L~~~~f~~ 770 (783)
+||.+||..||.+|||+.++ |+|+||+.
T Consensus 246 ~li~~~L~~dP~~Rpta~e~------L~hp~~~~ 273 (444)
T 3soa_A 246 DLINKMLTINPSKRITAAEA------LKHPWISH 273 (444)
T ss_dssp HHHHHHSCSSTTTSCCHHHH------HHSCTTHH
T ss_pred HHHHHHcCCChhHCCCHHHH------hcCccccC
Confidence 99999999999999999999 56777754
No 42
>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*
Probab=100.00 E-value=9.9e-44 Score=394.09 Aligned_cols=263 Identities=27% Similarity=0.387 Sum_probs=218.5
Q ss_pred ccccceeEeeeeccCCcEEEEEEEEeC-CceEEEEEEecccCCH-HHHHHHHHHHHH-HHhCCCCceeeEeceeecCCce
Q 003963 502 ILWEDLTIGEQIGQGSCGTVYHAVWYG-SQDVAVKVFSRQEYSD-EVIHSFRQEVSL-MKRLRHPNVLLFMGAVTSPQRL 578 (783)
Q Consensus 502 ~~~~~y~i~~~LG~G~fG~Vy~a~~~~-~~~vAiK~i~~~~~~~-~~~~~~~~Ei~i-l~~l~HpnIv~l~~~~~~~~~~ 578 (783)
...++|++++.||+|+||.||+|.++. ++.||||++.+..... .....+..|..+ ++.++|||||++++++...+.+
T Consensus 35 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~~~~~ 114 (373)
T 2r5t_A 35 AKPSDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKL 114 (373)
T ss_dssp CCGGGEEEEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEEEECSSEE
T ss_pred CChhheEEEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEeCCEE
Confidence 345789999999999999999999875 4679999998765432 334456667776 5678999999999999999999
Q ss_pred EEEEEecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCccccc
Q 003963 579 CIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHE 658 (783)
Q Consensus 579 ~lV~E~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~~ 658 (783)
|+|||||+||+|.+++.+. ..+++..++.++.||+.||+|||++| |+||||||+||||+.+|++||+|||+++....
T Consensus 115 ~lv~E~~~gg~L~~~l~~~-~~~~~~~~~~~~~qi~~aL~~LH~~g--ivHrDlkp~NIll~~~g~ikL~DFG~a~~~~~ 191 (373)
T 2r5t_A 115 YFVLDYINGGELFYHLQRE-RCFLEPRARFYAAEIASALGYLHSLN--IVYRDLKPENILLDSQGHIVLTDFGLCKENIE 191 (373)
T ss_dssp EEEEECCCSCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHHTT--CCCCCCCGGGEEECTTSCEEECCCCBCGGGBC
T ss_pred EEEEeCCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCC--ceecCCCHHHEEECCCCCEEEeeCcccccccc
Confidence 9999999999999999764 45889999999999999999999999 99999999999999999999999999986544
Q ss_pred ccccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhcccccccCCCCCCHHHHHH
Q 003963 659 TYLTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAAI 738 (783)
Q Consensus 659 ~~~~~~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~l~~L 738 (783)
........+||+.|+|||++.+..++.++|||||||++|||++|..||...+..+....+. .....++..+++.+.+|
T Consensus 192 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~~~i~--~~~~~~~~~~~~~~~~l 269 (373)
T 2r5t_A 192 HNSTTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNIL--NKPLQLKPNITNSARHL 269 (373)
T ss_dssp CCCCCCSBSCCCCCCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSBHHHHHHHHH--HSCCCCCSSSCHHHHHH
T ss_pred CCCccccccCCccccCHHHhCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHHHHHHHHH--hcccCCCCCCCHHHHHH
Confidence 4444556789999999999999999999999999999999999999999888877776663 33556778899999999
Q ss_pred HHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhcC
Q 003963 739 VESCWHSDPQCRPSFQELVDKLRDLQRQYFQAS 771 (783)
Q Consensus 739 I~~cL~~dP~~RPsa~ell~~L~~L~~~~f~~~ 771 (783)
|.+||++||.+||++.+.++.+ +.|+||+.+
T Consensus 270 i~~lL~~dp~~R~~~~~~~~~i--~~h~~f~~~ 300 (373)
T 2r5t_A 270 LEGLLQKDRTKRLGAKDDFMEI--KSHVFFSLI 300 (373)
T ss_dssp HHHHTCSSGGGSTTTTTTHHHH--HTSGGGTTC
T ss_pred HHHHcccCHHhCCCCCCCHHHH--hCCccccCC
Confidence 9999999999999985443333 678999654
No 43
>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A
Probab=100.00 E-value=6.3e-43 Score=370.93 Aligned_cols=263 Identities=30% Similarity=0.543 Sum_probs=228.2
Q ss_pred ccccccccceeEeeeeccCCcEEEEEEEEeCCceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEeceeecCCc
Q 003963 498 LDYEILWEDLTIGEQIGQGSCGTVYHAVWYGSQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQR 577 (783)
Q Consensus 498 ~~~e~~~~~y~i~~~LG~G~fG~Vy~a~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~ 577 (783)
..+++..++|++.+.||+|+||.||++.+..+..||||++....... ..+.+|+.+++.++||||+++++++...+.
T Consensus 17 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~---~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~ 93 (283)
T 3gen_A 17 GSWEIDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSE---DEFIEEAKVMMNLSHEKLVQLYGVCTKQRP 93 (283)
T ss_dssp CTTBCCGGGEEEEEECC---CEEEEEEEETTTEEEEEEEECTTSBCH---HHHHHHHHHHHTCCCTTBCCEEEEECSSSS
T ss_pred CCccCCHHHHHhHhhcCCCCCceEEEEEEcCCCeEEEEEecCCCCCH---HHHHHHHHHHhcCCCCCEeeEEEEEecCCC
Confidence 34567778999999999999999999998888889999998765554 467899999999999999999999999999
Q ss_pred eEEEEEecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCcccc
Q 003963 578 LCIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKH 657 (783)
Q Consensus 578 ~~lV~E~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~ 657 (783)
+++||||+++++|.+++......+++..++.++.||+.||.|||+++ |+||||||+|||++.++.+||+|||++....
T Consensus 94 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~--i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~ 171 (283)
T 3gen_A 94 IFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQ--FLHRDLAARNCLVNDQGVVKVSDFGLSRYVL 171 (283)
T ss_dssp EEEEECCCTTCBHHHHHHCGGGCCCHHHHHHHHHHHHHHHHHHHHTT--CCCSSCSGGGEEECTTSCEEECSTTGGGGBC
T ss_pred eEEEEeccCCCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHCC--ccCCCCccceEEEcCCCCEEEcccccccccc
Confidence 99999999999999999876667999999999999999999999998 9999999999999999999999999997654
Q ss_pred ccc-ccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCChHHHHHHhhcccccccCCCCCCHHH
Q 003963 658 ETY-LTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELAT-EKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRW 735 (783)
Q Consensus 658 ~~~-~~~~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~l 735 (783)
... .......+|+.|+|||++.+..++.++|||||||++|+|++ |+.||...+.......+.. ......+..+++.+
T Consensus 172 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~t~g~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l 250 (283)
T 3gen_A 172 DDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQ-GLRLYRPHLASEKV 250 (283)
T ss_dssp CHHHHSTTSTTSCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHT-TCCCCCCTTCCHHH
T ss_pred ccccccccCCccCcccCCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCccccChhHHHHHHhc-ccCCCCCCcCCHHH
Confidence 432 12233456788999999999999999999999999999998 9999999888777666542 23455677789999
Q ss_pred HHHHHHhhhhCCCCCCCHHHHHHHHHHHHHH
Q 003963 736 AAIVESCWHSDPQCRPSFQELVDKLRDLQRQ 766 (783)
Q Consensus 736 ~~LI~~cL~~dP~~RPsa~ell~~L~~L~~~ 766 (783)
.+||.+||..||.+|||+.++++.|.++...
T Consensus 251 ~~li~~~l~~~p~~Rps~~~ll~~L~~~~~~ 281 (283)
T 3gen_A 251 YTIMYSCWHEKADERPTFKILLSNILDVMDE 281 (283)
T ss_dssp HHHHHHTTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHccCChhHCcCHHHHHHHHHHHhhc
Confidence 9999999999999999999999999887653
No 44
>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*
Probab=100.00 E-value=3.5e-43 Score=388.06 Aligned_cols=259 Identities=22% Similarity=0.358 Sum_probs=223.8
Q ss_pred ccccceeEeeeeccCCcEEEEEEEEeC-CceEEEEEEecccCCH----HHHHHHHHHHHHHHhCCCCceeeEeceeecCC
Q 003963 502 ILWEDLTIGEQIGQGSCGTVYHAVWYG-SQDVAVKVFSRQEYSD----EVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQ 576 (783)
Q Consensus 502 ~~~~~y~i~~~LG~G~fG~Vy~a~~~~-~~~vAiK~i~~~~~~~----~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~ 576 (783)
...++|++++.||+|+||.||+|.+.. ++.||+|++....... .....+.+|+.+|+.++||||+++++++....
T Consensus 9 ~~~~~y~~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~ 88 (361)
T 2yab_A 9 KVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYENRT 88 (361)
T ss_dssp CGGGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEECSS
T ss_pred ChhhceEEeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEEeCC
Confidence 345789999999999999999999865 5679999998765322 12457889999999999999999999999999
Q ss_pred ceEEEEEecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCC----cEEEEecCC
Q 003963 577 RLCIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHW----TVKVGDFGL 652 (783)
Q Consensus 577 ~~~lV~E~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~----~vkL~DFGl 652 (783)
.+|+|||||+||+|.+++... ..+++..++.++.||+.||.|||++| |+||||||+|||++.++ .+||+|||+
T Consensus 89 ~~~lv~e~~~gg~L~~~l~~~-~~l~~~~~~~i~~qi~~aL~~LH~~g--ivHrDlkp~NIll~~~~~~~~~vkl~DFG~ 165 (361)
T 2yab_A 89 DVVLILELVSGGELFDFLAQK-ESLSEEEATSFIKQILDGVNYLHTKK--IAHFDLKPENIMLLDKNIPIPHIKLIDFGL 165 (361)
T ss_dssp EEEEEEECCCSCBHHHHHTTC-SCCBHHHHHHHHHHHHHHHHHHHHTT--EECCCCSGGGEEESCTTSSSCCEEECCCSS
T ss_pred EEEEEEEcCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCC--cccCCCCHHHEEEeCCCCCccCEEEEecCC
Confidence 999999999999999999764 46999999999999999999999998 99999999999998776 799999999
Q ss_pred CcccccccccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccccc--ccCCCC
Q 003963 653 SRLKHETYLTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQR--LEIPKD 730 (783)
Q Consensus 653 a~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~elltG~~Pf~~~~~~~~~~~i~~~~~~--~~~~~~ 730 (783)
+....... .....+||+.|+|||++.+..++.++|||||||++|+|++|.+||...+..+.+..+...... ...+..
T Consensus 166 a~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~ 244 (361)
T 2yab_A 166 AHEIEDGV-EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYDFDEEFFSQ 244 (361)
T ss_dssp CEECCTTC-CCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHTTCCCCCHHHHTT
T ss_pred ceEcCCCC-ccccCCCCccEECchHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCCCchhccC
Confidence 98665432 234567999999999999999999999999999999999999999998888777666433322 123367
Q ss_pred CCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhc
Q 003963 731 VDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQA 770 (783)
Q Consensus 731 ~s~~l~~LI~~cL~~dP~~RPsa~ell~~L~~L~~~~f~~ 770 (783)
+++.+.+||.+||..||.+|||+.++ ++|+||+.
T Consensus 245 ~s~~~~~li~~~L~~dP~~R~t~~e~------l~hp~~~~ 278 (361)
T 2yab_A 245 TSELAKDFIRKLLVKETRKRLTIQEA------LRHPWITP 278 (361)
T ss_dssp SCHHHHHHHHHHSCSSTTTSCCHHHH------HTSTTTSC
T ss_pred CCHHHHHHHHHHCCCChhHCcCHHHH------hcCcCcCC
Confidence 89999999999999999999999999 67888864
No 45
>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*
Probab=100.00 E-value=3.2e-43 Score=369.56 Aligned_cols=259 Identities=29% Similarity=0.593 Sum_probs=229.3
Q ss_pred cccccceeEeeeeccCCcEEEEEEEEeCCceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEeceeecC--Cce
Q 003963 501 EILWEDLTIGEQIGQGSCGTVYHAVWYGSQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSP--QRL 578 (783)
Q Consensus 501 e~~~~~y~i~~~LG~G~fG~Vy~a~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~--~~~ 578 (783)
++..++|++.+.||+|+||.||+|.+. ++.||||++..........+.+.+|+.+++.++||||+++++++... ..+
T Consensus 6 ~i~~~~y~~~~~lg~G~~g~V~~~~~~-~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 84 (271)
T 3kmu_A 6 GIDFKQLNFLTKLNENHSGELWKGRWQ-GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHP 84 (271)
T ss_dssp CCCGGGCEEEEEEEEETTEEEEEEEET-TEEEEEEEECCTTCCHHHHHHHHHHGGGGCCCSCTTEECEEEEECTTTSSSC
T ss_pred CCCHHHhHHHHHhcCCCcceEEEEEEC-CeeEEEEEecccccCHHHHHHHHHHHHHHHhcCCCchhheEEEEccCCCCCe
Confidence 456789999999999999999999975 66899999988777777778899999999999999999999999887 788
Q ss_pred EEEEEecCCCCHHHHHhhcCC-cchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCcccc
Q 003963 579 CIVTEFLPRGSLFRLLQRNTT-KLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKH 657 (783)
Q Consensus 579 ~lV~E~~~ggsL~~~L~~~~~-~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~ 657 (783)
++||||+++++|.+++..... .+++..++.++.||+.||.|||+++..|+||||||+|||++.++.++|+|||++....
T Consensus 85 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~~i~H~dikp~Nil~~~~~~~~l~~~~~~~~~~ 164 (271)
T 3kmu_A 85 TLITHWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLHTLEPLIPRHALNSRSVMIDEDMTARISMADVKFSFQ 164 (271)
T ss_dssp EEEEECCTTCBHHHHHHSCSSCCCCHHHHHHHHHHHHHHHHHHTTSSSCCTTCCCSGGGEEECTTSCEEEEGGGSCCTTS
T ss_pred EeeecccCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCccceEEEcCCcceeEEeccceeeec
Confidence 999999999999999986543 5899999999999999999999977679999999999999999999999999875432
Q ss_pred cccccccCCCCCCcccCcccccCCCCCc---hhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhcccccccCCCCCCHH
Q 003963 658 ETYLTTKTGKGTPQWMAPEVLRNEPSDE---KSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPR 734 (783)
Q Consensus 658 ~~~~~~~~~~Gt~~Y~aPE~~~~~~~s~---~sDIwSLG~il~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~ 734 (783)
. ....||+.|+|||++.+..++. ++|||||||++|+|++|..||...+.......+........++..++++
T Consensus 165 ~-----~~~~~t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (271)
T 3kmu_A 165 S-----PGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSNMEIGMKVALEGLRPTIPPGISPH 239 (271)
T ss_dssp C-----TTCBSCGGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHHCSCTTTTSCHHHHHHHHHHSCCCCCCCTTCCHH
T ss_pred c-----cCccCCccccChhhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCccccChHHHHHHHHhcCCCCCCCCCCCHH
Confidence 2 2456799999999998876544 8999999999999999999999988887766665556667788899999
Q ss_pred HHHHHHHhhhhCCCCCCCHHHHHHHHHHHHH
Q 003963 735 WAAIVESCWHSDPQCRPSFQELVDKLRDLQR 765 (783)
Q Consensus 735 l~~LI~~cL~~dP~~RPsa~ell~~L~~L~~ 765 (783)
+.+||.+||..||.+|||+.++++.|+++++
T Consensus 240 ~~~li~~~l~~~p~~Rps~~~il~~L~~l~~ 270 (271)
T 3kmu_A 240 VSKLMKICMNEDPAKRPKFDMIVPILEKMQD 270 (271)
T ss_dssp HHHHHHHHTCSSGGGSCCHHHHHHHHHHHCC
T ss_pred HHHHHHHHcCCChhhCcCHHHHHHHHHHhhc
Confidence 9999999999999999999999999988753
No 46
>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B
Probab=100.00 E-value=5.3e-43 Score=386.70 Aligned_cols=258 Identities=21% Similarity=0.372 Sum_probs=224.2
Q ss_pred cccceeEeeeeccCCcEEEEEEEEeC-CceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEeceeecCCceEEE
Q 003963 503 LWEDLTIGEQIGQGSCGTVYHAVWYG-SQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIV 581 (783)
Q Consensus 503 ~~~~y~i~~~LG~G~fG~Vy~a~~~~-~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lV 581 (783)
..++|++.+.||+|+||.||+|.+.. ++.||+|++..........+.+.+|+.+++.++|||||++++++...+..|+|
T Consensus 27 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv 106 (362)
T 2bdw_A 27 FSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLV 106 (362)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred cccCeEEeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEE
Confidence 34789999999999999999999864 57899999988777777778899999999999999999999999999999999
Q ss_pred EEecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCC---CcEEEEecCCCccccc
Q 003963 582 TEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKH---WTVKVGDFGLSRLKHE 658 (783)
Q Consensus 582 ~E~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~---~~vkL~DFGla~~~~~ 658 (783)
||||++++|.+++... ..+++..++.++.||+.||.|||+++ |+||||||+|||++.+ +.+||+|||++.....
T Consensus 107 ~e~~~gg~L~~~l~~~-~~~~~~~~~~~~~qi~~al~~lH~~~--ivH~Dlkp~NIll~~~~~~~~~kl~DfG~a~~~~~ 183 (362)
T 2bdw_A 107 FDLVTGGELFEDIVAR-EFYSEADASHCIQQILESIAYCHSNG--IVHRNLKPENLLLASKAKGAAVKLADFGLAIEVND 183 (362)
T ss_dssp ECCCCSCBHHHHHTTC-SCCCHHHHHHHHHHHHHHHHHHHHTT--CBCCCCSGGGEEESCSSTTCCEEECCCTTCBCCTT
T ss_pred EecCCCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCC--eEeccCchHHEEEecCCCCCCEEEeecCcceEecC
Confidence 9999999999999764 46899999999999999999999998 9999999999999764 4599999999986654
Q ss_pred ccccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhcccccccC--CCCCCHHHH
Q 003963 659 TYLTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLEI--PKDVDPRWA 736 (783)
Q Consensus 659 ~~~~~~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~--~~~~s~~l~ 736 (783)
.. .....+||+.|+|||++.+..++.++|||||||++|+|++|.+||...+.......+.......+. ...+++++.
T Consensus 184 ~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 262 (362)
T 2bdw_A 184 SE-AWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAK 262 (362)
T ss_dssp CC-SCCCSCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCTTGGGGSCHHHH
T ss_pred Cc-ccccCCCCccccCHHHHccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhCCCCCCcccccCCCHHHH
Confidence 32 233567999999999999999999999999999999999999999988887776666433322222 246799999
Q ss_pred HHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhc
Q 003963 737 AIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQA 770 (783)
Q Consensus 737 ~LI~~cL~~dP~~RPsa~ell~~L~~L~~~~f~~ 770 (783)
+||.+||..||.+||++.++ |+|+||+.
T Consensus 263 ~li~~~L~~dP~~R~t~~e~------l~hp~~~~ 290 (362)
T 2bdw_A 263 SLIDSMLTVNPKKRITADQA------LKVPWICN 290 (362)
T ss_dssp HHHHHHSCSSGGGSCCHHHH------TTSHHHHT
T ss_pred HHHHHHcCCChhhCcCHHHH------hcCcccCC
Confidence 99999999999999999999 56777754
No 47
>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=3.3e-43 Score=381.83 Aligned_cols=258 Identities=21% Similarity=0.330 Sum_probs=223.2
Q ss_pred cccceeEeeeeccCCcEEEEEEEEeC-CceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEeceeecCCceEEE
Q 003963 503 LWEDLTIGEQIGQGSCGTVYHAVWYG-SQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIV 581 (783)
Q Consensus 503 ~~~~y~i~~~LG~G~fG~Vy~a~~~~-~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lV 581 (783)
..++|++.+.||+|+||.||+|.+.. ++.||+|++.... .....+.+|+.+++.++||||+++++++...+.+++|
T Consensus 3 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~---~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv 79 (321)
T 1tki_A 3 LYEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKG---TDQVLVKKEISILNIARHRNILHLHESFESMEELVMI 79 (321)
T ss_dssp CTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCT---HHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEE
T ss_pred hhhceEeeeEEecCCCeEEEEEEECCCCcEEEEEEEecCc---ccHHHHHHHHHHHHhCCCCCCCeEeEEEecCCEEEEE
Confidence 45789999999999999999999865 4679999986432 3345688999999999999999999999999999999
Q ss_pred EEecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcC--CCcEEEEecCCCcccccc
Q 003963 582 TEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDK--HWTVKVGDFGLSRLKHET 659 (783)
Q Consensus 582 ~E~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~--~~~vkL~DFGla~~~~~~ 659 (783)
||||++++|.+++......+++..++.++.||+.||.|||+++ |+||||||+|||++. ++.+||+|||++......
T Consensus 80 ~e~~~g~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~g--ivH~Dlkp~NIl~~~~~~~~~kl~Dfg~a~~~~~~ 157 (321)
T 1tki_A 80 FEFISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLHSHN--IGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPG 157 (321)
T ss_dssp ECCCCCCBHHHHHTSSSCCCCHHHHHHHHHHHHHHHHHHHHTT--EECCCCCGGGEEESSSSCCCEEECCCTTCEECCTT
T ss_pred EEeCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC--CCcCCCCHHHEEEccCCCCCEEEEECCCCeECCCC
Confidence 9999999999999876667999999999999999999999998 999999999999987 789999999999866543
Q ss_pred cccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhcccccc--cCCCCCCHHHHH
Q 003963 660 YLTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRL--EIPKDVDPRWAA 737 (783)
Q Consensus 660 ~~~~~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~elltG~~Pf~~~~~~~~~~~i~~~~~~~--~~~~~~s~~l~~ 737 (783)
. ......||+.|+|||++.+..++.++|||||||++|+|++|..||...+.......+....... .....+++++.+
T Consensus 158 ~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~ 236 (321)
T 1tki_A 158 D-NFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQIIENIMNAEYTFDEEAFKEISIEAMD 236 (321)
T ss_dssp C-EEEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTCCCCCHHHHTTSCHHHHH
T ss_pred C-ccccccCChhhcCcHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCcCCCHHHHHHHHHcCCCCCChhhhccCCHHHHH
Confidence 2 2234568999999999999889999999999999999999999999888877766654332221 123578999999
Q ss_pred HHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhcCc
Q 003963 738 IVESCWHSDPQCRPSFQELVDKLRDLQRQYFQASR 772 (783)
Q Consensus 738 LI~~cL~~dP~~RPsa~ell~~L~~L~~~~f~~~~ 772 (783)
||.+||..||.+|||+.++ |+|+||+...
T Consensus 237 li~~~L~~dp~~Rpt~~e~------l~hp~~~~~~ 265 (321)
T 1tki_A 237 FVDRLLVKERKSRMTASEA------LQHPWLKQKI 265 (321)
T ss_dssp HHHTTSCSSGGGSCCHHHH------HHSHHHHSCG
T ss_pred HHHHHcCCChhHCcCHHHH------hcChhhccCc
Confidence 9999999999999999999 6789997653
No 48
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*
Probab=100.00 E-value=1.2e-43 Score=402.69 Aligned_cols=260 Identities=25% Similarity=0.446 Sum_probs=217.9
Q ss_pred cccccceeEeeeeccCCcEEEEEEEEeC-CceEEEEEEecccC-CHHHHHHHHHHHHHHHhCCCCceeeEeceeecCCce
Q 003963 501 EILWEDLTIGEQIGQGSCGTVYHAVWYG-SQDVAVKVFSRQEY-SDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRL 578 (783)
Q Consensus 501 e~~~~~y~i~~~LG~G~fG~Vy~a~~~~-~~~vAiK~i~~~~~-~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~ 578 (783)
....++|++.++||+|+||.||+|.+.. ++.||||++..... .......+.+|+.+++.++||||+++++++...+.+
T Consensus 144 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~ 223 (446)
T 4ejn_A 144 RVTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRL 223 (446)
T ss_dssp CCCGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCCSCTTSCCEEEEEEETTEE
T ss_pred CCChHHcEEeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeEeeEEEEEeeCCEE
Confidence 3456789999999999999999999865 56799999976532 233456678899999999999999999999999999
Q ss_pred EEEEEecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHh-CCCCEEecCCCCCCEEEcCCCcEEEEecCCCcccc
Q 003963 579 CIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHH-CNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKH 657 (783)
Q Consensus 579 ~lV~E~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~-~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~ 657 (783)
|+|||||++++|.+++... ..+++..++.++.||+.||+|||+ ++ ||||||||+||||+.++.+||+|||+++...
T Consensus 224 ~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~aL~~LH~~~g--iiHrDlkp~NIll~~~~~~kl~DFG~a~~~~ 300 (446)
T 4ejn_A 224 CFVMEYANGGELFFHLSRE-RVFSEDRARFYGAEIVSALDYLHSEKN--VVYRDLKLENLMLDKDGHIKITDFGLCKEGI 300 (446)
T ss_dssp EEEECCCSSCBHHHHHHHH-SCCCHHHHHHHHHHHHHHHHHHHHHTC--CCCCCCCGGGEEECSSSCEEECCCCCCCTTC
T ss_pred EEEEeeCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHhhcCC--EEECCCCHHHEEECCCCCEEEccCCCceecc
Confidence 9999999999999999764 468999999999999999999998 88 9999999999999999999999999998655
Q ss_pred cccccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhcccccccCCCCCCHHHHH
Q 003963 658 ETYLTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAA 737 (783)
Q Consensus 658 ~~~~~~~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~l~~ 737 (783)
.........+||+.|+|||++.+..++.++|||||||+||+|++|+.||...+.......+. .....+|..+++++.+
T Consensus 301 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~--~~~~~~p~~~~~~~~~ 378 (446)
T 4ejn_A 301 KDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELIL--MEEIRFPRTLGPEAKS 378 (446)
T ss_dssp C-----CCSSSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHH--HCCCCCCTTSCHHHHH
T ss_pred CCCcccccccCCccccCHhhcCCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHHHHHHHHH--hCCCCCCccCCHHHHH
Confidence 44444556789999999999999999999999999999999999999999888877766653 3455678889999999
Q ss_pred HHHHhhhhCCCCCC-----CHHHHHHHHHHHHHHHhhcC
Q 003963 738 IVESCWHSDPQCRP-----SFQELVDKLRDLQRQYFQAS 771 (783)
Q Consensus 738 LI~~cL~~dP~~RP-----sa~ell~~L~~L~~~~f~~~ 771 (783)
||.+||..||.+|| ++.++ ++|+||+.+
T Consensus 379 li~~~L~~dP~~R~~~~~~t~~el------l~hp~f~~~ 411 (446)
T 4ejn_A 379 LLSGLLKKDPKQRLGGGSEDAKEI------MQHRFFAGI 411 (446)
T ss_dssp HHHHHTCSSTTTSTTCSTTTHHHH------HTSGGGTTC
T ss_pred HHHHHcccCHHHhCCCCCCCHHHH------HhCccccCC
Confidence 99999999999999 99999 789999764
No 49
>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*
Probab=100.00 E-value=2.8e-43 Score=390.87 Aligned_cols=264 Identities=31% Similarity=0.541 Sum_probs=230.7
Q ss_pred cccccccceeEeeeeccCCcEEEEEEEEe-CCceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEeceeecCCc
Q 003963 499 DYEILWEDLTIGEQIGQGSCGTVYHAVWY-GSQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQR 577 (783)
Q Consensus 499 ~~e~~~~~y~i~~~LG~G~fG~Vy~a~~~-~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~ 577 (783)
.|++..++|++.++||+|+||.||+|.+. .++.||||++... ........+.+|+.+|+.++|||||++++++...+.
T Consensus 108 ~~~~~~~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~ 186 (377)
T 3cbl_A 108 KWVLNHEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRET-LPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQP 186 (377)
T ss_dssp TTBCCGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEECCTT-SCHHHHTTTTHHHHHHTTCCCTTBCCEEEEECSSSS
T ss_pred ccEEchHHeEEeeEeccCCCCeEEEEEEecCCeEEEEEEcccc-CCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEecCCC
Confidence 45677789999999999999999999986 4678999998754 345556678899999999999999999999999999
Q ss_pred eEEEEEecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCcccc
Q 003963 578 LCIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKH 657 (783)
Q Consensus 578 ~~lV~E~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~ 657 (783)
+|+||||+++|+|.+++......+++..++.++.||+.||+|||+++ |+||||||+||||+.++.+||+|||+++...
T Consensus 187 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~--ivHrDlkp~Nil~~~~~~~kl~DfG~s~~~~ 264 (377)
T 3cbl_A 187 IYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESKC--CIHRDLAARNCLVTEKNVLKISDFGMSREEA 264 (377)
T ss_dssp CEEEEECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHTT--EECSCCSGGGEEECTTCCEEECCGGGCEECT
T ss_pred cEEEEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC--cCCcccCHHHEEEcCCCcEEECcCCCceecC
Confidence 99999999999999999877667999999999999999999999998 9999999999999999999999999997644
Q ss_pred cccccc--cCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCChHHHHHHhhcccccccCCCCCCHH
Q 003963 658 ETYLTT--KTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELAT-EKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPR 734 (783)
Q Consensus 658 ~~~~~~--~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~ 734 (783)
...... ....+++.|+|||++.+..++.++|||||||++|||++ |..||......+....+. .....+.|..+++.
T Consensus 265 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~t~g~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 343 (377)
T 3cbl_A 265 DGVYAASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQQTREFVE-KGGRLPCPELCPDA 343 (377)
T ss_dssp TSEEECCSSCCEEEGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCSSTTSCHHHHHHHHH-TTCCCCCCTTCCHH
T ss_pred CCceeecCCCCCCCcCcCCHhHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHH-cCCCCCCCCCCCHH
Confidence 332111 11234678999999998889999999999999999998 999999988877665553 34456778889999
Q ss_pred HHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHH
Q 003963 735 WAAIVESCWHSDPQCRPSFQELVDKLRDLQRQ 766 (783)
Q Consensus 735 l~~LI~~cL~~dP~~RPsa~ell~~L~~L~~~ 766 (783)
+.+||.+||..||.+|||+.++++.|+++...
T Consensus 344 l~~li~~cl~~dP~~Rps~~~i~~~L~~i~~~ 375 (377)
T 3cbl_A 344 VFRLMEQCWAYEPGQRPSFSTIYQELQSIRKR 375 (377)
T ss_dssp HHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCCchhCcCHHHHHHHHHHHHhh
Confidence 99999999999999999999999999998765
No 50
>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...
Probab=100.00 E-value=3e-43 Score=386.95 Aligned_cols=256 Identities=21% Similarity=0.359 Sum_probs=225.3
Q ss_pred ccccceeEeeeeccCCcEEEEEEEEeC-CceEEEEEEecccCC-HHHHHHHHHHHHHHHhCCCCceeeEeceeecCCceE
Q 003963 502 ILWEDLTIGEQIGQGSCGTVYHAVWYG-SQDVAVKVFSRQEYS-DEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLC 579 (783)
Q Consensus 502 ~~~~~y~i~~~LG~G~fG~Vy~a~~~~-~~~vAiK~i~~~~~~-~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~ 579 (783)
...++|++++.||+|+||.||+|.+.. ++.||||++.+.... ......+.+|+.+|+.++||||+++++++.....+|
T Consensus 38 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~ 117 (350)
T 1rdq_E 38 AQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLY 117 (350)
T ss_dssp CCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEE
T ss_pred CCHHHCEEEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEE
Confidence 345799999999999999999999864 578999999764321 123457888999999999999999999999999999
Q ss_pred EEEEecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCcccccc
Q 003963 580 IVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHET 659 (783)
Q Consensus 580 lV~E~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~~~ 659 (783)
+||||++||+|.+++... ..+++..++.++.||+.||.|||+++ |+||||||+||||+.++.+||+|||+++.....
T Consensus 118 lv~e~~~gg~L~~~l~~~-~~~~~~~~~~~~~qi~~aL~~LH~~~--ivHrDlkp~NIll~~~g~~kL~DFg~a~~~~~~ 194 (350)
T 1rdq_E 118 MVMEYVAGGEMFSHLRRI-GRFSEPHARFYAAQIVLTFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR 194 (350)
T ss_dssp EEEECCTTCBHHHHHHHH-CCCCHHHHHHHHHHHHHHHHHHHHTT--EECCCCSGGGEEECTTSCEEECCCTTCEECSSC
T ss_pred EEEcCCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCC--cccccCccceEEECCCCCEEEcccccceeccCC
Confidence 999999999999999764 35899999999999999999999999 999999999999999999999999999865432
Q ss_pred cccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhcccccccCCCCCCHHHHHHH
Q 003963 660 YLTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAAIV 739 (783)
Q Consensus 660 ~~~~~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~l~~LI 739 (783)
....+||+.|+|||++.+..++.++|||||||++|+|++|.+||...+.......+.. ....+|..+++++.+||
T Consensus 195 ---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~--~~~~~p~~~~~~~~~li 269 (350)
T 1rdq_E 195 ---TWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVS--GKVRFPSHFSSDLKDLL 269 (350)
T ss_dssp ---BCCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHH--CCCCCCTTCCHHHHHHH
T ss_pred ---cccccCCccccCHHHhcCCCCCCcCCEecccHhHhHHhhCCCCCCCCCHHHHHHHHHc--CCCCCCCCCCHHHHHHH
Confidence 2356799999999999999999999999999999999999999998888777766643 35667888999999999
Q ss_pred HHhhhhCCCCCCC-----HHHHHHHHHHHHHHHhhcC
Q 003963 740 ESCWHSDPQCRPS-----FQELVDKLRDLQRQYFQAS 771 (783)
Q Consensus 740 ~~cL~~dP~~RPs-----a~ell~~L~~L~~~~f~~~ 771 (783)
.+||+.||.+||+ +.++ +.|+||+.+
T Consensus 270 ~~lL~~dp~~R~~~~~~~~~ei------~~h~~f~~~ 300 (350)
T 1rdq_E 270 RNLLQVDLTKRFGNLKNGVNDI------KNHKWFATT 300 (350)
T ss_dssp HHHSCSCTTTCTTSSTTTTHHH------HTSGGGTTC
T ss_pred HHHhhcCHHhccCCccCCHHHH------HhCcCcCCC
Confidence 9999999999998 8888 678999653
No 51
>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}
Probab=100.00 E-value=5.9e-43 Score=376.62 Aligned_cols=262 Identities=34% Similarity=0.527 Sum_probs=221.1
Q ss_pred cccceeEeeeeccCCcEEEEEEEEeC-CceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEeceeecCCceEEE
Q 003963 503 LWEDLTIGEQIGQGSCGTVYHAVWYG-SQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIV 581 (783)
Q Consensus 503 ~~~~y~i~~~LG~G~fG~Vy~a~~~~-~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lV 581 (783)
..++|++.++||+|+||.||+|.+.. ++.||+|++.. ........+.+|+.+++.++||||+++++++..++..++|
T Consensus 8 ~~~~~~~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~--~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv 85 (310)
T 3s95_A 8 RPSDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIR--FDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFI 85 (310)
T ss_dssp CGGGEEEEEEEECCSSEEEEEEEETTTCCEEEEEEESC--CCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEE
T ss_pred ChhHeeccceecCCCCEEEEEEEECCCCcEEEEEEecc--CCHHHHHHHHHHHHHHHhCCCcCcccEEEEEecCCeeEEE
Confidence 45799999999999999999999865 56799998854 3456678899999999999999999999999999999999
Q ss_pred EEecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCcccccccc
Q 003963 582 TEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETYL 661 (783)
Q Consensus 582 ~E~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~~ 661 (783)
|||+++++|.+++......+++..++.++.||+.||+|||+++ |+||||||+||||+.++.+||+|||++........
T Consensus 86 ~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~--ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 163 (310)
T 3s95_A 86 TEYIKGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLHSMN--IIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKT 163 (310)
T ss_dssp EECCTTCBHHHHHHHCCTTSCHHHHHHHHHHHHHHHHHHHHTT--EECSCCSTTSEEECTTSCEEECCCTTCEECC----
T ss_pred EEecCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCC--ccCCCCCcCeEEECCCCCEEEeecccceecccccc
Confidence 9999999999999887777999999999999999999999999 99999999999999999999999999976543321
Q ss_pred c--------------ccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHh-hccccccc
Q 003963 662 T--------------TKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAV-GFMNQRLE 726 (783)
Q Consensus 662 ~--------------~~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~elltG~~Pf~~~~~~~~~~~i-~~~~~~~~ 726 (783)
. ....+||+.|+|||++.+..++.++|||||||++|+|++|..||............ ........
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (310)
T 3s95_A 164 QPEGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMDFGLNVRGFLDRY 243 (310)
T ss_dssp ----------------CCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHTCCSSTTTSCBCTTSSBCHHHHHHHT
T ss_pred cccccccccccccccccccCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHhcCCCCCcchhhhHHHHhhhhhcccccc
Confidence 1 11457999999999999999999999999999999999999998654321110000 00011233
Q ss_pred CCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHh
Q 003963 727 IPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYF 768 (783)
Q Consensus 727 ~~~~~s~~l~~LI~~cL~~dP~~RPsa~ell~~L~~L~~~~f 768 (783)
.+..+++.+.+||.+||..||.+|||+.++++.|+.++..+-
T Consensus 244 ~~~~~~~~l~~li~~~l~~dP~~Rps~~~l~~~L~~l~~~~~ 285 (310)
T 3s95_A 244 CPPNCPPSFFPITVRCCDLDPEKRPSFVKLEHWLETLRMHLA 285 (310)
T ss_dssp CCTTCCTTHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhcc
Confidence 567889999999999999999999999999999999987654
No 52
>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*
Probab=100.00 E-value=1.2e-42 Score=368.99 Aligned_cols=264 Identities=33% Similarity=0.591 Sum_probs=217.5
Q ss_pred ccccccccceeEeeeeccCCcEEEEEEEEeCC----ceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEeceee
Q 003963 498 LDYEILWEDLTIGEQIGQGSCGTVYHAVWYGS----QDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVT 573 (783)
Q Consensus 498 ~~~e~~~~~y~i~~~LG~G~fG~Vy~a~~~~~----~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~ 573 (783)
.++++..++|++.+.||+|+||.||+|.+... ..||+|++.... .......+.+|+.+++.++||||+++++++.
T Consensus 8 ~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~ 86 (281)
T 1mp8_A 8 RDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCT-SDSVREKFLQEALTMRQFDHPHIVKLIGVIT 86 (281)
T ss_dssp -CCBCCGGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTT-SHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC
T ss_pred cceEEehHHeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEeccccC-CHHHHHHHHHHHHHHHhCCCCccceEEEEEc
Confidence 34677789999999999999999999997542 358999876543 4556678999999999999999999999985
Q ss_pred cCCceEEEEEecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCC
Q 003963 574 SPQRLCIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLS 653 (783)
Q Consensus 574 ~~~~~~lV~E~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla 653 (783)
.+..|+||||+++++|.+++......+++..++.++.||+.||.|||+++ |+||||||+|||++.++.+||+|||++
T Consensus 87 -~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~--i~H~dlkp~Nil~~~~~~~kl~Dfg~~ 163 (281)
T 1mp8_A 87 -ENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKR--FVHRDIAARNVLVSSNDCVKLGDFGLS 163 (281)
T ss_dssp -SSSCEEEEECCTTEEHHHHHHHTTTTSCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCSGGGEEEEETTEEEECC----
T ss_pred -cCccEEEEecCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCC--eecccccHHHEEECCCCCEEECccccc
Confidence 56789999999999999999877667999999999999999999999998 999999999999999999999999999
Q ss_pred cccccccc-cccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCChHHHHHHhhcccccccCCCCC
Q 003963 654 RLKHETYL-TTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELAT-EKIPWDNLNSMQVIGAVGFMNQRLEIPKDV 731 (783)
Q Consensus 654 ~~~~~~~~-~~~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~ 731 (783)
........ ......+++.|+|||++.+..++.++|||||||++|+|++ |..||...........+.. .....++..+
T Consensus 164 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~pf~~~~~~~~~~~i~~-~~~~~~~~~~ 242 (281)
T 1mp8_A 164 RYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIEN-GERLPMPPNC 242 (281)
T ss_dssp ---------------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHT-TCCCCCCTTC
T ss_pred cccCcccccccccCCCcccccChhhcccCCCCCccCchHHHHHHHHHHhcCCCCCCcCCHHHHHHHHHc-CCCCCCCCCC
Confidence 76544321 2233456889999999999999999999999999999997 9999998877766655532 2345677889
Q ss_pred CHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHH
Q 003963 732 DPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQ 766 (783)
Q Consensus 732 s~~l~~LI~~cL~~dP~~RPsa~ell~~L~~L~~~ 766 (783)
++.+.+||.+||..||.+||++.++++.|+++...
T Consensus 243 ~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~ 277 (281)
T 1mp8_A 243 PPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILEE 277 (281)
T ss_dssp CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999988765
No 53
>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*
Probab=100.00 E-value=4.1e-43 Score=385.27 Aligned_cols=269 Identities=29% Similarity=0.521 Sum_probs=227.9
Q ss_pred CCcccccccccceeEeeeeccCCcEEEEEEEEeC------CceEEEEEEecccCCHHHHHHHHHHHHHHHhC-CCCceee
Q 003963 495 NDCLDYEILWEDLTIGEQIGQGSCGTVYHAVWYG------SQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRL-RHPNVLL 567 (783)
Q Consensus 495 ~~~~~~e~~~~~y~i~~~LG~G~fG~Vy~a~~~~------~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l-~HpnIv~ 567 (783)
.+...|++..++|++.++||+|+||.||+|.+.+ ++.||||++.... .....+.+.+|+.+++.+ +|||||+
T Consensus 12 ~~~~~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~~hpniv~ 90 (359)
T 3vhe_A 12 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGA-THSEHRALMSELKILIHIGHHLNVVN 90 (359)
T ss_dssp CCHHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTC-CHHHHHHHHHHHHHHHHHCCCTTBCC
T ss_pred CCcccccccccceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCcC-CHHHHHHHHHHHHHHHhhcCCcceee
Confidence 3445677888999999999999999999998643 2579999997543 445567889999999999 7899999
Q ss_pred EeceeecCC-ceEEEEEecCCCCHHHHHhhcCC-----------------------------------------------
Q 003963 568 FMGAVTSPQ-RLCIVTEFLPRGSLFRLLQRNTT----------------------------------------------- 599 (783)
Q Consensus 568 l~~~~~~~~-~~~lV~E~~~ggsL~~~L~~~~~----------------------------------------------- 599 (783)
+++++...+ .+++|||||++|+|.+++.....
T Consensus 91 ~~~~~~~~~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (359)
T 3vhe_A 91 LLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEE 170 (359)
T ss_dssp EEEEECSTTSCCEEEEECCTTEEHHHHHHTTTTSBCSCC-----------------------------------------
T ss_pred eeeeeecCCCceEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCccccccccccccc
Confidence 999988755 48999999999999999976432
Q ss_pred ------------------cchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCccccccc-
Q 003963 600 ------------------KLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETY- 660 (783)
Q Consensus 600 ------------------~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~- 660 (783)
.+++..++.++.||+.||+|||+++ |+||||||+||||+.++.+||+|||++.......
T Consensus 171 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~~--ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~ 248 (359)
T 3vhe_A 171 KSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRK--CIHRDLAARNILLSEKNVVKICDFGLARDIYKDPD 248 (359)
T ss_dssp -------------CTTTTCBCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCSGGGEEECGGGCEEECCCGGGSCTTSCTT
T ss_pred cccchhhhcccccchhccccCHHHHHHHHHHHHHHHHHHHHCC--cccCCCChhhEEEcCCCcEEEEeccceeeeccccc
Confidence 1889999999999999999999998 9999999999999999999999999997653321
Q ss_pred -ccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCChHHHHHHhhcccccccCCCCCCHHHHHH
Q 003963 661 -LTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELAT-EKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAAI 738 (783)
Q Consensus 661 -~~~~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~l~~L 738 (783)
.......||+.|+|||++.+..++.++|||||||++|+|++ |..||.....................+..+++++.+|
T Consensus 249 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 328 (359)
T 3vhe_A 249 YVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQT 328 (359)
T ss_dssp CEEC--CEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHHHHHHHHTCCCCCCTTCCHHHHHH
T ss_pred chhccccCCCceeEChhhhcCCCCCchhhhhhHHHHHHHHHhcCCCCCCccchhHHHHHHHHcCCCCCCCCCCCHHHHHH
Confidence 22334567899999999999999999999999999999998 9999988765554444434445667788899999999
Q ss_pred HHHhhhhCCCCCCCHHHHHHHHHHHHHH
Q 003963 739 VESCWHSDPQCRPSFQELVDKLRDLQRQ 766 (783)
Q Consensus 739 I~~cL~~dP~~RPsa~ell~~L~~L~~~ 766 (783)
|.+||..||.+|||+.+++++|+++...
T Consensus 329 i~~~l~~dP~~Rps~~ell~~L~~~~~~ 356 (359)
T 3vhe_A 329 MLDCWHGEPSQRPTFSELVEHLGNLLQA 356 (359)
T ss_dssp HHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred HHHHccCChhhCCCHHHHHHHHHHHHHH
Confidence 9999999999999999999999988764
No 54
>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*
Probab=100.00 E-value=1.7e-43 Score=396.75 Aligned_cols=261 Identities=23% Similarity=0.366 Sum_probs=223.4
Q ss_pred cccccceeEeeeeccCCcEEEEEEEEeC-CceEEEEEEecccCCH-HHHHHHHHHHHHHHhCCCCceeeEeceeecCCce
Q 003963 501 EILWEDLTIGEQIGQGSCGTVYHAVWYG-SQDVAVKVFSRQEYSD-EVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRL 578 (783)
Q Consensus 501 e~~~~~y~i~~~LG~G~fG~Vy~a~~~~-~~~vAiK~i~~~~~~~-~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~ 578 (783)
.+..++|+++++||+|+||.||+|.+.. ++.||||++.+..... .....+.+|+.+++.++|||||++++++.+...+
T Consensus 65 ~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~ 144 (410)
T 3v8s_A 65 RMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYL 144 (410)
T ss_dssp SCCGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred ccCccccEEEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEE
Confidence 4456899999999999999999999875 4679999997532111 1123467899999999999999999999999999
Q ss_pred EEEEEecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCccccc
Q 003963 579 CIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHE 658 (783)
Q Consensus 579 ~lV~E~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~~ 658 (783)
|+|||||+||+|.+++... .+++..++.++.||+.||+|||+++ |+||||||+||||+.++++||+|||+++....
T Consensus 145 ~lV~E~~~gg~L~~~l~~~--~~~e~~~~~~~~qi~~aL~~LH~~g--ivHrDLKp~NILl~~~g~ikL~DFG~a~~~~~ 220 (410)
T 3v8s_A 145 YMVMEYMPGGDLVNLMSNY--DVPEKWARFYTAEVVLALDAIHSMG--FIHRDVKPDNMLLDKSGHLKLADFGTCMKMNK 220 (410)
T ss_dssp EEEECCCTTEEHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHHHTT--EECCCCSGGGEEECTTSCEEECCCTTCEECCT
T ss_pred EEEEeCCCCCcHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCC--eEeccCCHHHeeECCCCCEEEeccceeEeecc
Confidence 9999999999999999754 5899999999999999999999998 99999999999999999999999999976554
Q ss_pred cc-ccccCCCCCCcccCcccccCCC----CCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhcccccccCC--CCC
Q 003963 659 TY-LTTKTGKGTPQWMAPEVLRNEP----SDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLEIP--KDV 731 (783)
Q Consensus 659 ~~-~~~~~~~Gt~~Y~aPE~~~~~~----~s~~sDIwSLG~il~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~~--~~~ 731 (783)
.. ....+.+||+.|+|||++.+.. ++.++|||||||+||+|++|.+||...+....+..+........+| ..+
T Consensus 221 ~~~~~~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~ 300 (410)
T 3v8s_A 221 EGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNSLTFPDDNDI 300 (410)
T ss_dssp TSEEECCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTHHHHCCCCTTCCC
T ss_pred CCcccccCCcCCccccCHHHhhccCCCcCCCCcceEecchHHHHHHHhCCCCCCCCChhhHHHHHHhccccccCCCcccc
Confidence 32 2334678999999999998765 7889999999999999999999999988887777765433333333 479
Q ss_pred CHHHHHHHHHhhhhCCCC--CCCHHHHHHHHHHHHHHHhhcC
Q 003963 732 DPRWAAIVESCWHSDPQC--RPSFQELVDKLRDLQRQYFQAS 771 (783)
Q Consensus 732 s~~l~~LI~~cL~~dP~~--RPsa~ell~~L~~L~~~~f~~~ 771 (783)
++++++||.+||..+|.+ ||++.+| ++|+||+.+
T Consensus 301 s~~~~~li~~lL~~~~~rlgR~~~~ei------~~Hp~f~~~ 336 (410)
T 3v8s_A 301 SKEAKNLICAFLTDREVRLGRNGVEEI------KRHLFFKND 336 (410)
T ss_dssp CHHHHHHHHHHSSCGGGCTTSSCHHHH------HTSGGGCCS
T ss_pred cHHHHHHHHHHccChhhhCCCCCHHHH------hcCccccCC
Confidence 999999999999988888 9999999 789999875
No 55
>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}
Probab=100.00 E-value=1.2e-42 Score=374.01 Aligned_cols=262 Identities=24% Similarity=0.360 Sum_probs=215.7
Q ss_pred ccceeEeeeeccCCcEEEEEEEEeC-CceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEeceeecCCceEEEE
Q 003963 504 WEDLTIGEQIGQGSCGTVYHAVWYG-SQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIVT 582 (783)
Q Consensus 504 ~~~y~i~~~LG~G~fG~Vy~a~~~~-~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lV~ 582 (783)
.++|++.++||+|+||.||+|.+.. ++.||||++..........+.+.+|+.+++.++||||+++++++...+..++||
T Consensus 2 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 81 (311)
T 4agu_A 2 MEKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKRRLHLVF 81 (311)
T ss_dssp -CCEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCCCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred cccceEeeEEeecCCeEEEEEEeCCCCcEEEEEEeeccccchHHHHHHHHHHHHHHhCCCCCccchhheeecCCeEEEEE
Confidence 4789999999999999999999865 578999999877666666788899999999999999999999999999999999
Q ss_pred EecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCccccccccc
Q 003963 583 EFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETYLT 662 (783)
Q Consensus 583 E~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~~~ 662 (783)
||+++++|.+++.. ...+++..++.++.||+.||.|||++| |+||||||+|||++.++.+||+|||++.........
T Consensus 82 e~~~~~~l~~~~~~-~~~~~~~~~~~i~~~l~~~l~~lH~~~--ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~ 158 (311)
T 4agu_A 82 EYCDHTVLHELDRY-QRGVPEHLVKSITWQTLQAVNFCHKHN--CIHRDVKPENILITKHSVIKLCDFGFARLLTGPSDY 158 (311)
T ss_dssp ECCSEEHHHHHHHT-SSCCCHHHHHHHHHHHHHHHHHHHHTT--EECCCCSGGGEEECTTSCEEECCCTTCEECC-----
T ss_pred EeCCCchHHHHHhh-hcCCCHHHHHHHHHHHHHHHHHHHHCC--CcCCCCChhhEEEcCCCCEEEeeCCCchhccCcccc
Confidence 99999889888765 346899999999999999999999998 999999999999999999999999999876544444
Q ss_pred ccCCCCCCcccCcccccC-CCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhcccc------------------
Q 003963 663 TKTGKGTPQWMAPEVLRN-EPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQ------------------ 723 (783)
Q Consensus 663 ~~~~~Gt~~Y~aPE~~~~-~~~s~~sDIwSLG~il~elltG~~Pf~~~~~~~~~~~i~~~~~------------------ 723 (783)
.....||+.|+|||++.+ ..++.++|||||||++|+|++|.+||...........+.....
T Consensus 159 ~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (311)
T 4agu_A 159 YDDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLGDLIPRHQQVFSTNQYFSG 238 (311)
T ss_dssp -------GGGCCHHHHHTCSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHTCGGGTT
T ss_pred cCCCcCCccccChHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhccccccccccccccccccc
Confidence 445678999999999986 5679999999999999999999999988877655443321100
Q ss_pred -ccc----------CCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhcCcCC
Q 003963 724 -RLE----------IPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQASRST 774 (783)
Q Consensus 724 -~~~----------~~~~~s~~l~~LI~~cL~~dP~~RPsa~ell~~L~~L~~~~f~~~~~~ 774 (783)
... ....+++.+.+||.+||..||.+|||+.++ ++|+||+..+..
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~el------l~hp~f~~~~~~ 294 (311)
T 4agu_A 239 VKIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQL------LHHPYFENIREI 294 (311)
T ss_dssp CCCCCCSSCCCHHHHCTTCCHHHHHHHHHHCCSSTTTSCCHHHH------HTSGGGTTCC--
T ss_pred CcCCCccccchhhhhcccccHHHHHHHHHHccCChhhcCCHHHH------hcChHHHhccCH
Confidence 000 013578899999999999999999999999 689999987654
No 56
>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*
Probab=100.00 E-value=1.4e-42 Score=386.28 Aligned_cols=265 Identities=23% Similarity=0.360 Sum_probs=220.0
Q ss_pred cccccceeEeeeeccC--CcEEEEEEEEeC-CceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEeceeecCCc
Q 003963 501 EILWEDLTIGEQIGQG--SCGTVYHAVWYG-SQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQR 577 (783)
Q Consensus 501 e~~~~~y~i~~~LG~G--~fG~Vy~a~~~~-~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~ 577 (783)
....++|++.++||+| +||.||+|.+.. ++.||||++............+.+|+.+++.++|||||++++++...+.
T Consensus 21 ~~~~~~y~~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~ 100 (389)
T 3gni_B 21 LPEGGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNE 100 (389)
T ss_dssp CCCGGGEEEEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTE
T ss_pred cCCCCcEEEEecccCCcCCceEEEEEEEcCCCCEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCCCcEeEEEEECCE
Confidence 3445789999999999 999999999874 5789999999887777778889999999999999999999999999999
Q ss_pred eEEEEEecCCCCHHHHHhhc-CCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCccc
Q 003963 578 LCIVTEFLPRGSLFRLLQRN-TTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLK 656 (783)
Q Consensus 578 ~~lV~E~~~ggsL~~~L~~~-~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~ 656 (783)
+|+|||||++++|.+++... ...+++..++.++.||+.||+|||+++ |+||||||+||||+.++.+||+|||++...
T Consensus 101 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~--ivHrDlkp~NIll~~~~~~kl~dfg~~~~~ 178 (389)
T 3gni_B 101 LWVVTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYIHHMG--YVHRSVKASHILISVDGKVYLSGLRSNLSM 178 (389)
T ss_dssp EEEEEECCTTCBHHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHHHTT--EECCCCSGGGEEECTTCCEEECCGGGCEEC
T ss_pred EEEEEEccCCCCHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHhCC--eecCCCCHHHEEEcCCCCEEEcccccceee
Confidence 99999999999999999764 356899999999999999999999999 999999999999999999999999987643
Q ss_pred ccc-------cccccCCCCCCcccCcccccC--CCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccc-----
Q 003963 657 HET-------YLTTKTGKGTPQWMAPEVLRN--EPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMN----- 722 (783)
Q Consensus 657 ~~~-------~~~~~~~~Gt~~Y~aPE~~~~--~~~s~~sDIwSLG~il~elltG~~Pf~~~~~~~~~~~i~~~~----- 722 (783)
... .......+||+.|+|||++.+ ..++.++|||||||++|+|++|+.||...+.......+....
T Consensus 179 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~ 258 (389)
T 3gni_B 179 ISHGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCLL 258 (389)
T ss_dssp EETTEECSCBCCCCTTCTTTGGGSCHHHHSTTSSCBCTHHHHHHHHHHHHHHHHSSCTTTTCCSTTHHHHC---------
T ss_pred ccccccccccccccccccccccccCHHHHhccCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhcCCCCccc
Confidence 221 112233478999999999988 678999999999999999999999998765544332221000
Q ss_pred ---------------------------------------ccccCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHH
Q 003963 723 ---------------------------------------QRLEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDL 763 (783)
Q Consensus 723 ---------------------------------------~~~~~~~~~s~~l~~LI~~cL~~dP~~RPsa~ell~~L~~L 763 (783)
.....+..+++.+.+||.+||+.||.+|||+.++ |
T Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpta~el------l 332 (389)
T 3gni_B 259 DTSTIPAEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQRNPDARPSASTL------L 332 (389)
T ss_dssp -----------------------------------------------CCHHHHHHHHHHTCSCTTTSCCHHHH------T
T ss_pred cccccccccccccccccccccccccccccCccccccCCCCCCccccccCHHHHHHHHHHhhcCcccCCCHHHH------h
Confidence 0112345678999999999999999999999999 6
Q ss_pred HHHHhhcCcC
Q 003963 764 QRQYFQASRS 773 (783)
Q Consensus 764 ~~~~f~~~~~ 773 (783)
+|+||+....
T Consensus 333 ~hp~f~~~~~ 342 (389)
T 3gni_B 333 NHSFFKQIKR 342 (389)
T ss_dssp TSGGGGGC--
T ss_pred cCHHHHHHhh
Confidence 8999987654
No 57
>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}
Probab=100.00 E-value=1.4e-42 Score=377.46 Aligned_cols=260 Identities=24% Similarity=0.360 Sum_probs=222.7
Q ss_pred ccccceeEeeeeccCCcEEEEEEEEeC-CceEEEEEEecccCCH----HHHHHHHHHHHHHHhCCCCceeeEeceeecCC
Q 003963 502 ILWEDLTIGEQIGQGSCGTVYHAVWYG-SQDVAVKVFSRQEYSD----EVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQ 576 (783)
Q Consensus 502 ~~~~~y~i~~~LG~G~fG~Vy~a~~~~-~~~vAiK~i~~~~~~~----~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~ 576 (783)
...++|++.+.||+|+||.||+|.+.. ++.||+|++....... .....+.+|+.+|+.++||||+++++++....
T Consensus 8 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~ 87 (326)
T 2y0a_A 8 NVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKT 87 (326)
T ss_dssp CHHHHEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSS
T ss_pred CcccceEeceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEeCC
Confidence 345789999999999999999999865 5689999997654321 12457889999999999999999999999999
Q ss_pred ceEEEEEecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCC----cEEEEecCC
Q 003963 577 RLCIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHW----TVKVGDFGL 652 (783)
Q Consensus 577 ~~~lV~E~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~----~vkL~DFGl 652 (783)
.+++|||||++++|.+++... ..+++..++.++.||+.||.|||+++ |+||||||+|||++.++ .+||+|||+
T Consensus 88 ~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~al~~lH~~~--ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~ 164 (326)
T 2y0a_A 88 DVILILELVAGGELFDFLAEK-ESLTEEEATEFLKQILNGVYYLHSLQ--IAHFDLKPENIMLLDRNVPKPRIKIIDFGL 164 (326)
T ss_dssp EEEEEEECCCSCBHHHHHTTS-SCCBHHHHHHHHHHHHHHHHHHHHTT--EECCCCCGGGEEESCSSSSSCCEEECCCTT
T ss_pred EEEEEEEcCCCCCHHHHHHhc-CCcCHHHHHHHHHHHHHHHHHHHHCC--eEcCCCCHHHEEEecCCCCCCCEEEEECCC
Confidence 999999999999999999753 46999999999999999999999998 99999999999998877 899999999
Q ss_pred CcccccccccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccccc--ccCCCC
Q 003963 653 SRLKHETYLTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQR--LEIPKD 730 (783)
Q Consensus 653 a~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~elltG~~Pf~~~~~~~~~~~i~~~~~~--~~~~~~ 730 (783)
+....... ......||+.|+|||++.+..++.++|||||||++|+|++|..||...........+...... ...+..
T Consensus 165 a~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (326)
T 2y0a_A 165 AHKIDFGN-EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSN 243 (326)
T ss_dssp CEECCTTS-CCCCCCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHHTCCCCCHHHHTT
T ss_pred CeECCCCC-ccccccCCcCcCCceeecCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHhcCCCcCcccccc
Confidence 98664332 233557999999999999999999999999999999999999999988877766655433222 122357
Q ss_pred CCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhcC
Q 003963 731 VDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQAS 771 (783)
Q Consensus 731 ~s~~l~~LI~~cL~~dP~~RPsa~ell~~L~~L~~~~f~~~ 771 (783)
+++.+.+||.+||..||.+|||+.++ |+|+||+..
T Consensus 244 ~~~~~~~li~~~L~~dP~~Rpt~~e~------l~hp~~~~~ 278 (326)
T 2y0a_A 244 TSALAKDFIRRLLVKDPKKRMTIQDS------LQHPWIKPK 278 (326)
T ss_dssp SCHHHHHHHHHHSCSSGGGSCCHHHH------HHSTTTSCC
T ss_pred CCHHHHHHHHHHccCChhhCCCHHHH------hcCCCccCC
Confidence 89999999999999999999999999 678888653
No 58
>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*
Probab=100.00 E-value=2.2e-43 Score=399.02 Aligned_cols=263 Identities=20% Similarity=0.353 Sum_probs=224.4
Q ss_pred cccccceeEeeeeccCCcEEEEEEEEeC-CceEEEEEEecccCCH-HHHHHHHHHHHHHHhCCCCceeeEeceeecCCce
Q 003963 501 EILWEDLTIGEQIGQGSCGTVYHAVWYG-SQDVAVKVFSRQEYSD-EVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRL 578 (783)
Q Consensus 501 e~~~~~y~i~~~LG~G~fG~Vy~a~~~~-~~~vAiK~i~~~~~~~-~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~ 578 (783)
.+..++|+++++||+|+||.||+|.+.. ++.||||++.+..... .....+.+|+.++..++|||||+++++|.+.+.+
T Consensus 70 ~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~~~~~ 149 (437)
T 4aw2_A 70 RLHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAFQDDNNL 149 (437)
T ss_dssp SCCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCEEEEEECSSEE
T ss_pred cCChhheEEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCEE
Confidence 3456899999999999999999999876 4679999997532111 1123477899999999999999999999999999
Q ss_pred EEEEEecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCccccc
Q 003963 579 CIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHE 658 (783)
Q Consensus 579 ~lV~E~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~~ 658 (783)
|+|||||++|+|.+++......+++..++.++.||+.||.|||+++ ||||||||+||||+.++.+||+|||+++....
T Consensus 150 ~lV~Ey~~gg~L~~~l~~~~~~l~e~~~~~~~~qi~~aL~~LH~~g--iiHrDLKp~NILl~~~g~vkL~DFGla~~~~~ 227 (437)
T 4aw2_A 150 YLVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVIAIDSVHQLH--YVHRDIKPDNILMDMNGHIRLADFGSCLKLME 227 (437)
T ss_dssp EEEECCCTTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTT--EECCCCSGGGEEECTTSCEEECCCTTCEECCT
T ss_pred EEEEecCCCCcHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHHhCC--eEecccCHHHeeEcCCCCEEEcchhhhhhccc
Confidence 9999999999999999876667999999999999999999999998 99999999999999999999999999976544
Q ss_pred cc-ccccCCCCCCcccCccccc-----CCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhcccccccCC---C
Q 003963 659 TY-LTTKTGKGTPQWMAPEVLR-----NEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLEIP---K 729 (783)
Q Consensus 659 ~~-~~~~~~~Gt~~Y~aPE~~~-----~~~~s~~sDIwSLG~il~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~~---~ 729 (783)
.. ......+||+.|+|||++. ...++.++|||||||+||||++|++||...+..+.+..+........+| .
T Consensus 228 ~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~ 307 (437)
T 4aw2_A 228 DGTVQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKERFQFPTQVT 307 (437)
T ss_dssp TSCEECCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTHHHHCCCCSSCC
T ss_pred CCCcccccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCCCCCCCCChhHHHHhhhhccccccCCcccc
Confidence 32 2233468999999999987 5568999999999999999999999999988887777764433334444 4
Q ss_pred CCCHHHHHHHHHhhhhCCCC--CCCHHHHHHHHHHHHHHHhhcC
Q 003963 730 DVDPRWAAIVESCWHSDPQC--RPSFQELVDKLRDLQRQYFQAS 771 (783)
Q Consensus 730 ~~s~~l~~LI~~cL~~dP~~--RPsa~ell~~L~~L~~~~f~~~ 771 (783)
.+++++++||.+||..+|++ ||++.++ ++|+||+.+
T Consensus 308 ~~s~~~~dLi~~lL~~~~~r~~r~~~~ei------l~Hpff~~i 345 (437)
T 4aw2_A 308 DVSENAKDLIRRLICSREHRLGQNGIEDF------KKHPFFSGI 345 (437)
T ss_dssp CSCHHHHHHHHTTSSCGGGCTTTTTTHHH------HTSGGGTTC
T ss_pred cCCHHHHHHHHHHhcccccccCCCCHHHH------hCCCccCCC
Confidence 58999999999999888888 9999999 789999754
No 59
>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*
Probab=100.00 E-value=4.7e-42 Score=364.07 Aligned_cols=260 Identities=21% Similarity=0.364 Sum_probs=227.3
Q ss_pred ccceeEeeeeccCCcEEEEEEEEeC-CceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEeceeecCCceEEEE
Q 003963 504 WEDLTIGEQIGQGSCGTVYHAVWYG-SQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIVT 582 (783)
Q Consensus 504 ~~~y~i~~~LG~G~fG~Vy~a~~~~-~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lV~ 582 (783)
.++|++.+.||+|+||.||+|.+.. ++.||+|++............+.+|+.+++.++||||+++++++......++||
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 84 (284)
T 3kk8_A 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVF 84 (284)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hhhhhhhhhhcCcCCeEEEEEEEcCCCceEEEEEeecccCCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEcCCEEEEEE
Confidence 4789999999999999999999865 568999999888777777788999999999999999999999999999999999
Q ss_pred EecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCc---EEEEecCCCcccccc
Q 003963 583 EFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWT---VKVGDFGLSRLKHET 659 (783)
Q Consensus 583 E~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~---vkL~DFGla~~~~~~ 659 (783)
||+++++|.+++... ..+++..++.++.||+.||.|||+++ |+||||||+|||++.++. +||+|||++......
T Consensus 85 e~~~~~~l~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~--i~H~dikp~Nil~~~~~~~~~~kl~Dfg~~~~~~~~ 161 (284)
T 3kk8_A 85 DLVTGGELFEDIVAR-EFYSEADASHCIQQILESIAYCHSNG--IVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDS 161 (284)
T ss_dssp CCCCSCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHHTT--EECSCCCGGGEEESSSSTTCCEEECCCTTCEECCSS
T ss_pred ecCCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCC--cCcCCCCHHHEEEecCCCCCcEEEeeceeeEEcccC
Confidence 999999999988764 45899999999999999999999998 999999999999976655 999999999765543
Q ss_pred cccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccccccc--CCCCCCHHHHH
Q 003963 660 YLTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLE--IPKDVDPRWAA 737 (783)
Q Consensus 660 ~~~~~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~elltG~~Pf~~~~~~~~~~~i~~~~~~~~--~~~~~s~~l~~ 737 (783)
. ......||+.|+|||++.+..++.++|||||||++|+|++|..||...+.......+........ ....+++++.+
T Consensus 162 ~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (284)
T 3kk8_A 162 E-AWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKS 240 (284)
T ss_dssp C-BCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCTTTTTTSCHHHHH
T ss_pred c-cccCCCCCcCCcCchhhcCCCCCcccchHHHHHHHHHHHHCCCCCCCCchhHHHHHHHhccccCCchhhcccCHHHHH
Confidence 3 22345789999999999999999999999999999999999999998888777766544333222 23578999999
Q ss_pred HHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhcCcC
Q 003963 738 IVESCWHSDPQCRPSFQELVDKLRDLQRQYFQASRS 773 (783)
Q Consensus 738 LI~~cL~~dP~~RPsa~ell~~L~~L~~~~f~~~~~ 773 (783)
||.+||+.||.+|||+.++ ++|+||+....
T Consensus 241 li~~~l~~dp~~Rps~~~~------l~h~~~~~~~~ 270 (284)
T 3kk8_A 241 LIDSMLTVNPKKRITADQA------LKVPWICNRER 270 (284)
T ss_dssp HHHHHSCSSTTTSCCHHHH------TTSHHHHSCCC
T ss_pred HHHHHcccChhhCCCHHHH------hcCccccCChh
Confidence 9999999999999999999 67899976544
No 60
>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}
Probab=100.00 E-value=4.3e-42 Score=381.90 Aligned_cols=265 Identities=31% Similarity=0.567 Sum_probs=231.3
Q ss_pred cccccccceeEeeeeccCCcEEEEEEEEeCC--------ceEEEEEEecccCCHHHHHHHHHHHHHHHhC-CCCceeeEe
Q 003963 499 DYEILWEDLTIGEQIGQGSCGTVYHAVWYGS--------QDVAVKVFSRQEYSDEVIHSFRQEVSLMKRL-RHPNVLLFM 569 (783)
Q Consensus 499 ~~e~~~~~y~i~~~LG~G~fG~Vy~a~~~~~--------~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l-~HpnIv~l~ 569 (783)
.+++..++|++.++||+|+||.||+|.+... ..||||++.... .......+.+|+.+++.+ +|||||+++
T Consensus 63 ~~~i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~~hpnIv~~~ 141 (382)
T 3tt0_A 63 RWELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDA-TEKDLSDLISEMEMMKMIGKHKNIINLL 141 (382)
T ss_dssp TTBCCGGGEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTC-CHHHHHHHHHHHHHHHHHCCCTTBCCEE
T ss_pred ccccchhheEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeecccc-CHHHHHHHHHHHHHHHHhcCCchhhhhe
Confidence 4567788999999999999999999997532 359999987653 455567889999999999 899999999
Q ss_pred ceeecCCceEEEEEecCCCCHHHHHhhcC---------------CcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCC
Q 003963 570 GAVTSPQRLCIVTEFLPRGSLFRLLQRNT---------------TKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKS 634 (783)
Q Consensus 570 ~~~~~~~~~~lV~E~~~ggsL~~~L~~~~---------------~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp 634 (783)
+++...+.+++||||+++++|.+++.... ..+++..++.++.||+.||.|||+++ |+||||||
T Consensus 142 ~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~--ivH~Dlkp 219 (382)
T 3tt0_A 142 GACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKK--CIHRDLAA 219 (382)
T ss_dssp EEECSSSSCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCCG
T ss_pred eeeccCCceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCC--EecCCCCc
Confidence 99999999999999999999999997643 35899999999999999999999998 99999999
Q ss_pred CCEEEcCCCcEEEEecCCCccccccc--ccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCCh
Q 003963 635 SNLLVDKHWTVKVGDFGLSRLKHETY--LTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELAT-EKIPWDNLNS 711 (783)
Q Consensus 635 ~NILl~~~~~vkL~DFGla~~~~~~~--~~~~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~ellt-G~~Pf~~~~~ 711 (783)
+||||+.++.+||+|||+++...... .......+|+.|+|||++.+..++.++|||||||++|+|++ |..||...+.
T Consensus 220 ~NIll~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~ellt~g~~p~~~~~~ 299 (382)
T 3tt0_A 220 RNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPV 299 (382)
T ss_dssp GGEEECTTCCEEECSCSCCCCSSCCCTTCCCTTCCCGGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCH
T ss_pred ceEEEcCCCcEEEcccCcccccccccccccccCCCCCcceeCHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCH
Confidence 99999999999999999998654432 22334467889999999999999999999999999999999 9999999888
Q ss_pred HHHHHHhhcccccccCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHH
Q 003963 712 MQVIGAVGFMNQRLEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQY 767 (783)
Q Consensus 712 ~~~~~~i~~~~~~~~~~~~~s~~l~~LI~~cL~~dP~~RPsa~ell~~L~~L~~~~ 767 (783)
.+....+. .......+..+++++.+||.+||..||.+|||+.++++.|+++....
T Consensus 300 ~~~~~~~~-~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~~ 354 (382)
T 3tt0_A 300 EELFKLLK-EGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVALT 354 (382)
T ss_dssp HHHHHHHH-TTCCCCCCSSCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHS
T ss_pred HHHHHHHH-cCCCCCCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHHH
Confidence 77766553 33456677889999999999999999999999999999999997654
No 61
>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7
Probab=100.00 E-value=1.3e-42 Score=378.72 Aligned_cols=266 Identities=27% Similarity=0.491 Sum_probs=228.6
Q ss_pred ccccccccceeEeeeeccCCcEEEEEEEEeCC------ceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEece
Q 003963 498 LDYEILWEDLTIGEQIGQGSCGTVYHAVWYGS------QDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGA 571 (783)
Q Consensus 498 ~~~e~~~~~y~i~~~LG~G~fG~Vy~a~~~~~------~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~ 571 (783)
..+++..++|++.+.||+|+||.||+|.+.+. +.||||++.... .......+.+|+.+++.++||||++++++
T Consensus 40 ~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~hp~iv~~~~~ 118 (343)
T 1luf_A 40 LSLEYPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEA-SADMQADFQREAALMAEFDNPNIVKLLGV 118 (343)
T ss_dssp HHTBCCGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTC-CHHHHHHHHHHHHHHHTCCCTTBCCEEEE
T ss_pred ceeEecHHHCeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEecccc-CHHHHHHHHHHHHHHHhCCCCCEEEEEEE
Confidence 34566778999999999999999999998642 679999987543 45566789999999999999999999999
Q ss_pred eecCCceEEEEEecCCCCHHHHHhhcC-----------------------CcchHHHHHHHHHHHHHHHHHHHhCCCCEE
Q 003963 572 VTSPQRLCIVTEFLPRGSLFRLLQRNT-----------------------TKLDWRRRILMALDIARGVSYLHHCNPPII 628 (783)
Q Consensus 572 ~~~~~~~~lV~E~~~ggsL~~~L~~~~-----------------------~~l~~~~~~~i~~qi~~aL~~LH~~~~~Iv 628 (783)
+...+.+|+||||+++++|.+++.... ..+++..++.++.||+.||.|||+++ |+
T Consensus 119 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~--iv 196 (343)
T 1luf_A 119 CAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERK--FV 196 (343)
T ss_dssp ECSSSSCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHTT--CC
T ss_pred EccCCceEEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhCC--ee
Confidence 999999999999999999999997642 56899999999999999999999998 99
Q ss_pred ecCCCCCCEEEcCCCcEEEEecCCCccccccc--ccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHc-CCCC
Q 003963 629 HRDLKSSNLLVDKHWTVKVGDFGLSRLKHETY--LTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELAT-EKIP 705 (783)
Q Consensus 629 HrDIKp~NILl~~~~~vkL~DFGla~~~~~~~--~~~~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~ellt-G~~P 705 (783)
||||||+||||+.++.+||+|||++....... .......+|+.|+|||++.+..++.++|||||||++|+|++ |..|
T Consensus 197 H~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p 276 (343)
T 1luf_A 197 HRDLATRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQP 276 (343)
T ss_dssp CSCCSGGGEEECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCT
T ss_pred cCCCCcceEEECCCCeEEEeecCCCcccccCccccccCCCcccceecChhhhccCCcCcccccHHHHHHHHHHHhcCCCc
Confidence 99999999999999999999999987553321 22234567899999999999999999999999999999999 9999
Q ss_pred CCCCChHHHHHHhhcccccccCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHH
Q 003963 706 WDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQY 767 (783)
Q Consensus 706 f~~~~~~~~~~~i~~~~~~~~~~~~~s~~l~~LI~~cL~~dP~~RPsa~ell~~L~~L~~~~ 767 (783)
|......+....+.. ......+..+++.+.+||.+||..||.+||++.++++.|+++...+
T Consensus 277 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~~~~~L~~~~~~~ 337 (343)
T 1luf_A 277 YYGMAHEEVIYYVRD-GNILACPENCPLELYNLMRLCWSKLPADRPSFCSIHRILQRMCERA 337 (343)
T ss_dssp TTTSCHHHHHHHHHT-TCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTC--
T ss_pred CCCCChHHHHHHHhC-CCcCCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHHHHHHhhh
Confidence 998888777665532 3345667889999999999999999999999999999998876654
No 62
>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}
Probab=100.00 E-value=2.6e-43 Score=395.50 Aligned_cols=262 Identities=19% Similarity=0.318 Sum_probs=222.6
Q ss_pred cccccceeEeeeeccCCcEEEEEEEEeC-CceEEEEEEecccCC-HHHHHHHHHHHHHHHhCCCCceeeEeceeecCCce
Q 003963 501 EILWEDLTIGEQIGQGSCGTVYHAVWYG-SQDVAVKVFSRQEYS-DEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRL 578 (783)
Q Consensus 501 e~~~~~y~i~~~LG~G~fG~Vy~a~~~~-~~~vAiK~i~~~~~~-~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~ 578 (783)
.+..++|++.++||+|+||.||+|.++. ++.||||++.+.... ......+.+|+.++..++||||+++++++.+.+.+
T Consensus 57 ~~~~~~f~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~~~~~ 136 (412)
T 2vd5_A 57 RLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAFQDENYL 136 (412)
T ss_dssp SCCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCCEEEEEECSSEE
T ss_pred cCChhhEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEE
Confidence 3456899999999999999999999864 578999999764321 12234578899999999999999999999999999
Q ss_pred EEEEEecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCccccc
Q 003963 579 CIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHE 658 (783)
Q Consensus 579 ~lV~E~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~~ 658 (783)
|+|||||+||+|.+++.+....+++..++.++.||+.||.|||+++ ||||||||+||||+.++++||+|||+++....
T Consensus 137 ~lVmE~~~gg~L~~~l~~~~~~l~~~~~~~~~~qi~~aL~~LH~~g--iiHrDLKp~NILld~~g~vkL~DFGla~~~~~ 214 (412)
T 2vd5_A 137 YLVMEYYVGGDLLTLLSKFGERIPAEMARFYLAEIVMAIDSVHRLG--YVHRDIKPDNILLDRCGHIRLADFGSCLKLRA 214 (412)
T ss_dssp EEEECCCCSCBHHHHHHHHSSCCCHHHHHHHHHHHHHHHHHHHHTT--EECCCCSGGGEEECTTSCEEECCCTTCEECCT
T ss_pred EEEEcCCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC--eeecccCHHHeeecCCCCEEEeechhheeccC
Confidence 9999999999999999876667999999999999999999999998 99999999999999999999999999976554
Q ss_pred ccc-cccCCCCCCcccCccccc-------CCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhcccccccC---
Q 003963 659 TYL-TTKTGKGTPQWMAPEVLR-------NEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLEI--- 727 (783)
Q Consensus 659 ~~~-~~~~~~Gt~~Y~aPE~~~-------~~~~s~~sDIwSLG~il~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~--- 727 (783)
... .....+||+.|+|||++. +..++.++|||||||++|||++|+.||...+..+.+..+........+
T Consensus 215 ~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~ 294 (412)
T 2vd5_A 215 DGTVRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTAETYGKIVHYKEHLSLPLV 294 (412)
T ss_dssp TSCEECSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTHHHHCCCC--
T ss_pred CCccccceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhCCCCCCCCCHHHHHHHHHhcccCcCCCcc
Confidence 322 233568999999999987 356899999999999999999999999998888777666433322333
Q ss_pred CCCCCHHHHHHHHHhhhhCCCCC---CCHHHHHHHHHHHHHHHhhcC
Q 003963 728 PKDVDPRWAAIVESCWHSDPQCR---PSFQELVDKLRDLQRQYFQAS 771 (783)
Q Consensus 728 ~~~~s~~l~~LI~~cL~~dP~~R---Psa~ell~~L~~L~~~~f~~~ 771 (783)
+..+++++++||.+||. +|.+| |++.++ +.|+||+.+
T Consensus 295 ~~~~s~~~~dli~~lL~-~p~~Rlgr~~~~ei------~~Hpff~~i 334 (412)
T 2vd5_A 295 DEGVPEEARDFIQRLLC-PPETRLGRGGAGDF------RTHPFFFGL 334 (412)
T ss_dssp --CCCHHHHHHHHTTSS-CGGGCTTTTTHHHH------HTSGGGTTC
T ss_pred ccCCCHHHHHHHHHHcC-ChhhcCCCCCHHHH------hcCCCcCCC
Confidence 35799999999999999 99998 589999 689999764
No 63
>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=2.5e-42 Score=362.57 Aligned_cols=260 Identities=31% Similarity=0.584 Sum_probs=229.0
Q ss_pred ccccccceeEeeeeccCCcEEEEEEEEeCCceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEeceeecCCceE
Q 003963 500 YEILWEDLTIGEQIGQGSCGTVYHAVWYGSQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLC 579 (783)
Q Consensus 500 ~e~~~~~y~i~~~LG~G~fG~Vy~a~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~ 579 (783)
|.+..++|++.+.||+|+||.||++.+..++.||+|++....... +.+.+|+.+++.++||||+++++++...+..+
T Consensus 3 ~~i~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vaiK~~~~~~~~~---~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 79 (267)
T 3t9t_A 3 WVIDPSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSE---EDFIEEAEVMMKLSHPKLVQLYGVCLEQAPIC 79 (267)
T ss_dssp CBCCGGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTTBCH---HHHHHHHHHHHTCCCTTBCCEEEEECSSSSCE
T ss_pred eEEchhheeeeeEecCCCceeEEEEEecCCCeEEEEEccccCCCH---HHHHHHHHHHHhCCCCCEeeEEEEEccCCCeE
Confidence 455668999999999999999999998878889999998765543 46789999999999999999999999999999
Q ss_pred EEEEecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCcccccc
Q 003963 580 IVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHET 659 (783)
Q Consensus 580 lV~E~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~~~ 659 (783)
+||||+++++|.+++......+++..++.++.||+.||.|||+++ |+|+||||+|||++.++.+||+|||++......
T Consensus 80 lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~--i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~ 157 (267)
T 3t9t_A 80 LVTEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEAC--VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDD 157 (267)
T ss_dssp EEECCCTTCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTT--CCCSSCCGGGEEECGGGCEEECCTTGGGGBCCH
T ss_pred EEEeCCCCCcHHHHHhhCcccCCHHHHHHHHHHHHHHHHHHHhCC--cccCCCchheEEECCCCCEEEcccccccccccc
Confidence 999999999999999877677999999999999999999999998 999999999999999999999999998765432
Q ss_pred c-ccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCChHHHHHHhhcccccccCCCCCCHHHHH
Q 003963 660 Y-LTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELAT-EKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAA 737 (783)
Q Consensus 660 ~-~~~~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~l~~ 737 (783)
. .......+++.|+|||++.+..++.++|||||||++|+|++ |..||...........+.. ......+..+++.+.+
T Consensus 158 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~i~~-~~~~~~~~~~~~~l~~ 236 (267)
T 3t9t_A 158 QYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDIST-GFRLYKPRLASTHVYQ 236 (267)
T ss_dssp HHHSTTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHT-TCCCCCCTTSCHHHHH
T ss_pred cccccccccccccccChhhhcCCCccchhchhhhHHHHHHHhccCCCCCCCCCHHHHHHHHhc-CCcCCCCccCcHHHHH
Confidence 2 12234457889999999998899999999999999999999 8999998887776666543 2344566778999999
Q ss_pred HHHHhhhhCCCCCCCHHHHHHHHHHHHH
Q 003963 738 IVESCWHSDPQCRPSFQELVDKLRDLQR 765 (783)
Q Consensus 738 LI~~cL~~dP~~RPsa~ell~~L~~L~~ 765 (783)
||.+||..||.+||++.++++.|+++..
T Consensus 237 li~~~l~~~p~~Rps~~~ll~~L~~l~~ 264 (267)
T 3t9t_A 237 IMNHCWRERPEDRPAFSRLLRQLAEIAE 264 (267)
T ss_dssp HHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 9999999999999999999999998865
No 64
>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A
Probab=100.00 E-value=6.6e-43 Score=384.10 Aligned_cols=259 Identities=24% Similarity=0.344 Sum_probs=215.2
Q ss_pred cccceeEeeeeccCCcEEEEEEEEeC-CceEEEEEEecccC---CHHHHHHHHHHHHHHHhCCCCceeeEeceeecCCce
Q 003963 503 LWEDLTIGEQIGQGSCGTVYHAVWYG-SQDVAVKVFSRQEY---SDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRL 578 (783)
Q Consensus 503 ~~~~y~i~~~LG~G~fG~Vy~a~~~~-~~~vAiK~i~~~~~---~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~ 578 (783)
..++|++.+.||+|+||.||+|.+.. ++.||||++..... .......+.+|+.+++.++|||||++++++...+.+
T Consensus 22 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~ 101 (351)
T 3c0i_A 22 FEDVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGML 101 (351)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEE
T ss_pred cccceEEeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEE
Confidence 34689999999999999999999864 57899999865321 111245788999999999999999999999999999
Q ss_pred EEEEEecCCCCHHHHHhhc---CCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCc---EEEEecCC
Q 003963 579 CIVTEFLPRGSLFRLLQRN---TTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWT---VKVGDFGL 652 (783)
Q Consensus 579 ~lV~E~~~ggsL~~~L~~~---~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~---vkL~DFGl 652 (783)
|+|||||++++|.+++... ...+++..++.++.||+.||+|||+++ |+||||||+|||++.++. +||+|||+
T Consensus 102 ~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~--ivHrDlkp~NIl~~~~~~~~~vkl~Dfg~ 179 (351)
T 3c0i_A 102 YMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDNN--IIHRDVKPHCVLLASKENSAPVKLGGFGV 179 (351)
T ss_dssp EEEEECCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTT--EECSCCSGGGEEECSSSTTCCEEECCCTT
T ss_pred EEEEeCCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHCC--ceeccCChHHeEEecCCCCCcEEEecCcc
Confidence 9999999999998887543 335899999999999999999999998 999999999999986554 99999999
Q ss_pred CcccccccccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhcccc--cccCCCC
Q 003963 653 SRLKHETYLTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQ--RLEIPKD 730 (783)
Q Consensus 653 a~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~elltG~~Pf~~~~~~~~~~~i~~~~~--~~~~~~~ 730 (783)
+.............+||+.|+|||++.+..++.++|||||||++|+|++|..||.... ......+..... .......
T Consensus 180 a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~-~~~~~~i~~~~~~~~~~~~~~ 258 (351)
T 3c0i_A 180 AIQLGESGLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTK-ERLFEGIIKGKYKMNPRQWSH 258 (351)
T ss_dssp CEECCTTSCBCCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCSSH-HHHHHHHHHTCCCCCHHHHTT
T ss_pred eeEecCCCeeecCCcCCcCccCHHHHcCCCCCchHhhHHHHHHHHHHHHCCCCCCCcH-HHHHHHHHcCCCCCCcccccc
Confidence 9876655444456689999999999999999999999999999999999999998753 333333322111 1112256
Q ss_pred CCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhc
Q 003963 731 VDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQA 770 (783)
Q Consensus 731 ~s~~l~~LI~~cL~~dP~~RPsa~ell~~L~~L~~~~f~~ 770 (783)
+++++.+||.+||..||.+|||+.++ |+|+||+.
T Consensus 259 ~s~~~~~li~~~L~~dP~~R~s~~e~------l~hp~~~~ 292 (351)
T 3c0i_A 259 ISESAKDLVRRMLMLDPAERITVYEA------LNHPWLKE 292 (351)
T ss_dssp SCHHHHHHHHHHTCSSTTTSCCHHHH------HTSHHHHT
T ss_pred CCHHHHHHHHHHCCCChhHCcCHHHH------hcChhhcC
Confidence 89999999999999999999999999 56777764
No 65
>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*
Probab=100.00 E-value=2.7e-42 Score=371.04 Aligned_cols=263 Identities=29% Similarity=0.546 Sum_probs=227.7
Q ss_pred cccccccceeEeeeeccCCcEEEEEEEEeC------CceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEecee
Q 003963 499 DYEILWEDLTIGEQIGQGSCGTVYHAVWYG------SQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAV 572 (783)
Q Consensus 499 ~~e~~~~~y~i~~~LG~G~fG~Vy~a~~~~------~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~ 572 (783)
.+++..++|++.+.||+|+||.||+|.+.. ++.||||++.... .....+.+.+|+.+++.++||||+++++++
T Consensus 17 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~ 95 (314)
T 2ivs_A 17 KWEFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENA-SPSELRDLLSEFNVLKQVNHPHVIKLYGAC 95 (314)
T ss_dssp TTBCCGGGEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTC-CHHHHHHHHHHHHHHTTCCCTTBCCEEEEE
T ss_pred ccccchhheeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCC-CHHHHHHHHHHHHHHhhCCCCceeeEEEEE
Confidence 456677899999999999999999998742 2579999987543 455667899999999999999999999999
Q ss_pred ecCCceEEEEEecCCCCHHHHHhhcC-----------------------CcchHHHHHHHHHHHHHHHHHHHhCCCCEEe
Q 003963 573 TSPQRLCIVTEFLPRGSLFRLLQRNT-----------------------TKLDWRRRILMALDIARGVSYLHHCNPPIIH 629 (783)
Q Consensus 573 ~~~~~~~lV~E~~~ggsL~~~L~~~~-----------------------~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvH 629 (783)
...+.+++||||+++++|.+++.... ..+++..++.++.||+.||.|||+++ |+|
T Consensus 96 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~--ivH 173 (314)
T 2ivs_A 96 SQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMK--LVH 173 (314)
T ss_dssp CSSSSCEEEEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHHHTT--EEC
T ss_pred ecCCceEEEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHHHCC--Ccc
Confidence 99999999999999999999997643 24889999999999999999999998 999
Q ss_pred cCCCCCCEEEcCCCcEEEEecCCCccccccc--ccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHc-CCCCC
Q 003963 630 RDLKSSNLLVDKHWTVKVGDFGLSRLKHETY--LTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELAT-EKIPW 706 (783)
Q Consensus 630 rDIKp~NILl~~~~~vkL~DFGla~~~~~~~--~~~~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~ellt-G~~Pf 706 (783)
|||||+|||++.++.+||+|||++....... .......+++.|+|||++.+..++.++|||||||++|+|++ |..||
T Consensus 174 ~dikp~NIli~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~ 253 (314)
T 2ivs_A 174 RDLAARNILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPY 253 (314)
T ss_dssp CCCSGGGEEEETTTEEEECCCTTCEECTTTSCEECSSCCCSCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSS
T ss_pred cccchheEEEcCCCCEEEccccccccccccccceeccCCCCcccccChhhhcCCCcCchhhHHHHHHHHHHHHhCCCCCC
Confidence 9999999999999999999999997654322 22334467889999999999889999999999999999999 99999
Q ss_pred CCCChHHHHHHhhcccccccCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHH
Q 003963 707 DNLNSMQVIGAVGFMNQRLEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQR 765 (783)
Q Consensus 707 ~~~~~~~~~~~i~~~~~~~~~~~~~s~~l~~LI~~cL~~dP~~RPsa~ell~~L~~L~~ 765 (783)
...........+. .......+..+++.+.+||.+||..||.+||++.++++.|+++..
T Consensus 254 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~l~~~l~~~~~ 311 (314)
T 2ivs_A 254 PGIPPERLFNLLK-TGHRMERPDNCSEEMYRLMLQCWKQEPDKRPVFADISKDLEKMMV 311 (314)
T ss_dssp TTCCGGGHHHHHH-TTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHhh-cCCcCCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 9888776665543 233556778899999999999999999999999999999988754
No 66
>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}
Probab=100.00 E-value=1.4e-42 Score=386.09 Aligned_cols=259 Identities=22% Similarity=0.372 Sum_probs=219.5
Q ss_pred cccccceeEeeeeccCCcEEEEEEEEeC-CceEEEEEEecccCC-HHHHHHHHHHHHHHHhCCCCceeeEeceeecCCce
Q 003963 501 EILWEDLTIGEQIGQGSCGTVYHAVWYG-SQDVAVKVFSRQEYS-DEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRL 578 (783)
Q Consensus 501 e~~~~~y~i~~~LG~G~fG~Vy~a~~~~-~~~vAiK~i~~~~~~-~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~ 578 (783)
++..++|++++.||+|+||.||+|.+.. ++.||||++...... ......+.+|+.+|+.++|||||+++++|.....+
T Consensus 11 ~v~~~~y~i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~ 90 (384)
T 4fr4_A 11 DVNFDHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDEEDM 90 (384)
T ss_dssp CCCGGGEEEEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEE
T ss_pred CCChHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEE
Confidence 4567899999999999999999999865 467999999764321 12346788999999999999999999999999999
Q ss_pred EEEEEecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCccccc
Q 003963 579 CIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHE 658 (783)
Q Consensus 579 ~lV~E~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~~ 658 (783)
|+|||||.||+|..++... ..+++..++.++.||+.||.|||++| |+||||||+||||+.++.+||+|||++.....
T Consensus 91 ~lv~e~~~gg~L~~~l~~~-~~l~~~~~~~~~~qi~~aL~~LH~~g--ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~ 167 (384)
T 4fr4_A 91 FMVVDLLLGGDLRYHLQQN-VHFKEETVKLFICELVMALDYLQNQR--IIHRDMKPDNILLDEHGHVHITDFNIAAMLPR 167 (384)
T ss_dssp EEEECCCTTEEHHHHHHTT-CCCCHHHHHHHHHHHHHHHHHHHHTT--EECCCCSGGGEEECTTSCEEECCCTTCEECCT
T ss_pred EEEEecCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCC--ceeccCcHHHeEECCCCCEEEeccceeeeccC
Confidence 9999999999999999764 46999999999999999999999999 99999999999999999999999999986544
Q ss_pred ccccccCCCCCCcccCcccccC---CCCCchhHHHHHHHHHHHHHcCCCCCCCCCh---HHHHHHhhcccccccCCCCCC
Q 003963 659 TYLTTKTGKGTPQWMAPEVLRN---EPSDEKSDVYSFGVILWELATEKIPWDNLNS---MQVIGAVGFMNQRLEIPKDVD 732 (783)
Q Consensus 659 ~~~~~~~~~Gt~~Y~aPE~~~~---~~~s~~sDIwSLG~il~elltG~~Pf~~~~~---~~~~~~i~~~~~~~~~~~~~s 732 (783)
.. .....+||+.|+|||++.+ ..++.++|||||||++|+|++|..||..... ......+ ......+|..++
T Consensus 168 ~~-~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~~~~~--~~~~~~~p~~~s 244 (384)
T 4fr4_A 168 ET-QITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSSKEIVHTF--ETTVVTYPSAWS 244 (384)
T ss_dssp TC-CBCCCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSCSSCCCTTSCHHHHHHHH--HHCCCCCCTTSC
T ss_pred CC-ceeccCCCccccCCeeeccCCCCCCCccceeechHHHHHHHHhCCCCCCCCCCccHHHHHHHH--hhcccCCCCcCC
Confidence 32 3346689999999999874 4588999999999999999999999974432 2333232 234566788899
Q ss_pred HHHHHHHHHhhhhCCCCCCC-HHHHHHHHHHHHHHHhhcC
Q 003963 733 PRWAAIVESCWHSDPQCRPS-FQELVDKLRDLQRQYFQAS 771 (783)
Q Consensus 733 ~~l~~LI~~cL~~dP~~RPs-a~ell~~L~~L~~~~f~~~ 771 (783)
+.+.+||.+||..||.+||+ +.++ +.|+||+.+
T Consensus 245 ~~~~~li~~lL~~dP~~R~s~~~~l------~~hp~f~~~ 278 (384)
T 4fr4_A 245 QEMVSLLKKLLEPNPDQRFSQLSDV------QNFPYMNDI 278 (384)
T ss_dssp HHHHHHHHHHSCSSGGGSCCSHHHH------HTSGGGTTC
T ss_pred HHHHHHHHHHhcCCHhHhcccHHHH------HcChhhhcC
Confidence 99999999999999999998 7777 578888654
No 67
>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}
Probab=100.00 E-value=1.6e-42 Score=380.85 Aligned_cols=259 Identities=26% Similarity=0.379 Sum_probs=204.9
Q ss_pred cccccceeEeeeeccCCcEEEEEEEEeC-CceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEeceeecCCceE
Q 003963 501 EILWEDLTIGEQIGQGSCGTVYHAVWYG-SQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLC 579 (783)
Q Consensus 501 e~~~~~y~i~~~LG~G~fG~Vy~a~~~~-~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~ 579 (783)
+...++|++.+.||+|+||.||+|.+.. ++.||||++.... ..+.+.+|+.+++.++||||+++++++.....++
T Consensus 49 ~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~----~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 124 (349)
T 2w4o_A 49 DALSDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTV----DKKIVRTEIGVLLRLSHPNIIKLKEIFETPTEIS 124 (349)
T ss_dssp SCGGGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEC--------------CHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred ccccCcEEEeeEEeeCCCEEEEEEEECCCCcEEEEEEeccch----hHHHHHHHHHHHHhCCCCCCcceeeeEecCCeEE
Confidence 4456789999999999999999999875 4679999997643 2346778999999999999999999999999999
Q ss_pred EEEEecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcC---CCcEEEEecCCCccc
Q 003963 580 IVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDK---HWTVKVGDFGLSRLK 656 (783)
Q Consensus 580 lV~E~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~---~~~vkL~DFGla~~~ 656 (783)
+||||+++++|.+++... ..+++..++.++.||+.||.|||+++ |+||||||+||||+. ++.+||+|||+++..
T Consensus 125 lv~e~~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~~L~~LH~~~--ivH~Dikp~NIll~~~~~~~~~kl~Dfg~a~~~ 201 (349)
T 2w4o_A 125 LVLELVTGGELFDRIVEK-GYYSERDAADAVKQILEAVAYLHENG--IVHRDLKPENLLYATPAPDAPLKIADFGLSKIV 201 (349)
T ss_dssp EEECCCCSCBHHHHHTTC-SSCCHHHHHHHHHHHHHHHHHHHHTT--CCCCCCCGGGEEESSSSTTCCEEECCCC-----
T ss_pred EEEEeCCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCC--eEecCCCcccEEEecCCCCCCEEEccCcccccc
Confidence 999999999999999764 45899999999999999999999998 999999999999975 889999999999765
Q ss_pred ccccccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHH-HHHHhhccccc--ccCCCCCCH
Q 003963 657 HETYLTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQ-VIGAVGFMNQR--LEIPKDVDP 733 (783)
Q Consensus 657 ~~~~~~~~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~elltG~~Pf~~~~~~~-~~~~i~~~~~~--~~~~~~~s~ 733 (783)
.... ......||+.|+|||++.+..++.++|||||||++|+|++|..||....... ....+...... ......++.
T Consensus 202 ~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 280 (349)
T 2w4o_A 202 EHQV-LMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERGDQFMFRRILNCEYYFISPWWDEVSL 280 (349)
T ss_dssp ------------CGGGSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCTTCHHHHHHHHHTTCCCCCTTTTTTSCH
T ss_pred Cccc-ccccccCCCCccCHHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCcccHHHHHHHHhCCCccCCchhhhCCH
Confidence 4432 2235578999999999999999999999999999999999999997766544 33333222221 223357899
Q ss_pred HHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhcCcC
Q 003963 734 RWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQASRS 773 (783)
Q Consensus 734 ~l~~LI~~cL~~dP~~RPsa~ell~~L~~L~~~~f~~~~~ 773 (783)
++.+||.+||..||.+|||+.++ |+|+||+....
T Consensus 281 ~~~~li~~~L~~dP~~Rpt~~e~------l~hp~~~~~~~ 314 (349)
T 2w4o_A 281 NAKDLVRKLIVLDPKKRLTTFQA------LQHPWVTGKAA 314 (349)
T ss_dssp HHHHHHHTTSCSSGGGSCCHHHH------HHSTTTTSTTC
T ss_pred HHHHHHHHHccCChhhCcCHHHH------hcCcccCCCcc
Confidence 99999999999999999999999 67999976654
No 68
>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*
Probab=100.00 E-value=9.2e-43 Score=377.12 Aligned_cols=261 Identities=25% Similarity=0.345 Sum_probs=204.5
Q ss_pred ccceeEeeeeccCCcEEEEEEEEeC-CceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEeceeecCCceEEEE
Q 003963 504 WEDLTIGEQIGQGSCGTVYHAVWYG-SQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIVT 582 (783)
Q Consensus 504 ~~~y~i~~~LG~G~fG~Vy~a~~~~-~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lV~ 582 (783)
.++|+++++||+|+||.||+|.+.. ++.||||++...... .....+.+|+.+++.++||||+++++++..++.+|+||
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 82 (317)
T 2pmi_A 4 SSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEE-GTPSTAIREISLMKELKHENIVRLYDVIHTENKLTLVF 82 (317)
T ss_dssp ---------------CEEEEEECSSSCCEEEEEEEECCSTT-CSCHHHHHHHHHHTTCCBTTBCCEEEEECCTTEEEEEE
T ss_pred ccceeEeeEECCCCCEEEEEEEECCCCcEEEEEEeeccccc-ccHHHHHHHHHHHHhcCCCCcceEEEEEEECCeEEEEE
Confidence 3679999999999999999999764 567999999765422 22346778999999999999999999999999999999
Q ss_pred EecCCCCHHHHHhhcC-----CcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCcccc
Q 003963 583 EFLPRGSLFRLLQRNT-----TKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKH 657 (783)
Q Consensus 583 E~~~ggsL~~~L~~~~-----~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~ 657 (783)
||++ ++|.+++.... ..+++..++.++.||+.||.|||+++ |+||||||+|||++.++.+||+|||++....
T Consensus 83 e~~~-~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~--ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~ 159 (317)
T 2pmi_A 83 EFMD-NDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHENK--ILHRDLKPQNLLINKRGQLKLGDFGLARAFG 159 (317)
T ss_dssp ECCC-CBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHHHTT--EECCCCCGGGEEECTTCCEEECCCSSCEETT
T ss_pred EecC-CCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHHHCC--eeeCCCChHHeEEcCCCCEEECcCccceecC
Confidence 9997 59999986532 35889999999999999999999998 9999999999999999999999999998765
Q ss_pred cccccccCCCCCCcccCcccccCC-CCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhcccc-------------
Q 003963 658 ETYLTTKTGKGTPQWMAPEVLRNE-PSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQ------------- 723 (783)
Q Consensus 658 ~~~~~~~~~~Gt~~Y~aPE~~~~~-~~s~~sDIwSLG~il~elltG~~Pf~~~~~~~~~~~i~~~~~------------- 723 (783)
..........||+.|+|||++.+. .++.++|||||||++|+|++|..||...+.......+.....
T Consensus 160 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 239 (317)
T 2pmi_A 160 IPVNTFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLIFDIMGTPNESLWPSVTKL 239 (317)
T ss_dssp SCCCCCCCCCSCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCTTTCGGGGGC
T ss_pred CCcccCCCCcccccccCchHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChhHhhhhhhh
Confidence 443344456789999999999874 589999999999999999999999998887665544421100
Q ss_pred -------------------cccCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhcCcCC
Q 003963 724 -------------------RLEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQASRST 774 (783)
Q Consensus 724 -------------------~~~~~~~~s~~l~~LI~~cL~~dP~~RPsa~ell~~L~~L~~~~f~~~~~~ 774 (783)
....+..+++++.+||.+||+.||.+|||+.++ |+|+||+.....
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~------l~hp~f~~~~~~ 303 (317)
T 2pmi_A 240 PKYNPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQA------LHHPWFAEYYHH 303 (317)
T ss_dssp TTCCTTCCCCCCCCSHHHHGGGCSSCCCHHHHHHHHHHSCSSGGGSCCHHHH------TTSGGGGGGCC-
T ss_pred hhcccccccccchhHHHhhcccccccCCHHHHHHHHHHCCCCcccCCCHHHH------hCChhhhcccch
Confidence 011223578899999999999999999999999 689999876554
No 69
>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}
Probab=100.00 E-value=4.7e-43 Score=370.92 Aligned_cols=262 Identities=25% Similarity=0.427 Sum_probs=199.4
Q ss_pred cccceeEeeeeccCCcEEEEEEEEe-CCceEEEEEEecccCCH-HHHHHHHHHHHHHHhCCCCceeeEeceeecCCceEE
Q 003963 503 LWEDLTIGEQIGQGSCGTVYHAVWY-GSQDVAVKVFSRQEYSD-EVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCI 580 (783)
Q Consensus 503 ~~~~y~i~~~LG~G~fG~Vy~a~~~-~~~~vAiK~i~~~~~~~-~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~l 580 (783)
..++|++.+.||+|+||.||+|.+. .++.||||++....... .....+.+|+.+++.++||||+++++++...+..++
T Consensus 9 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 88 (278)
T 3cok_A 9 KIEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFEDSNYVYL 88 (278)
T ss_dssp SGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEECSSEEEE
T ss_pred ccccceeeeeecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEccCCeEEE
Confidence 3478999999999999999999985 46789999997543211 224678899999999999999999999999999999
Q ss_pred EEEecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCccccccc
Q 003963 581 VTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETY 660 (783)
Q Consensus 581 V~E~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~ 660 (783)
||||+++++|.+++......+++..++.++.||+.||.|||+++ |+|+||||+|||++.++.+||+|||++.......
T Consensus 89 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~--i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~ 166 (278)
T 3cok_A 89 VLEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGMLYLHSHG--ILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPH 166 (278)
T ss_dssp EEECCTTEEHHHHHHTCSSCCCHHHHHHHHHHHHHHHHHHHHTT--EECSSCCGGGEEECTTCCEEECCCTTCEECC---
T ss_pred EEecCCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCC--eecCCCCHHHEEEcCCCCEEEEeecceeeccCCC
Confidence 99999999999999876677999999999999999999999998 9999999999999999999999999998665443
Q ss_pred ccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhcccccccCCCCCCHHHHHHHH
Q 003963 661 LTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAAIVE 740 (783)
Q Consensus 661 ~~~~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~l~~LI~ 740 (783)
.......||+.|+|||++.+..++.++|||||||++|+|++|+.||...........+ .......+..++.++.+||.
T Consensus 167 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~li~ 244 (278)
T 3cok_A 167 EKHYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTLNKV--VLADYEMPSFLSIEAKDLIH 244 (278)
T ss_dssp -------------------------CTHHHHHHHHHHHHHHSSCSSCCCSCC-----C--CSSCCCCCTTSCHHHHHHHH
T ss_pred CcceeccCCCCcCCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCChhHHHHHHHH--hhcccCCccccCHHHHHHHH
Confidence 3344567899999999999998999999999999999999999999876655444333 22345567789999999999
Q ss_pred HhhhhCCCCCCCHHHHHHHHHHHHHHHhhcCcCC
Q 003963 741 SCWHSDPQCRPSFQELVDKLRDLQRQYFQASRST 774 (783)
Q Consensus 741 ~cL~~dP~~RPsa~ell~~L~~L~~~~f~~~~~~ 774 (783)
+||..||.+||++.++ +.|+||+...+.
T Consensus 245 ~~l~~dp~~Rps~~~~------l~h~~~~~~~~~ 272 (278)
T 3cok_A 245 QLLRRNPADRLSLSSV------LDHPFMSRNSST 272 (278)
T ss_dssp HHSCSSGGGSCCHHHH------TTSTTTC-----
T ss_pred HHcccCHhhCCCHHHH------hcCccccCCCCc
Confidence 9999999999999999 678999876554
No 70
>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*
Probab=100.00 E-value=2.9e-42 Score=376.13 Aligned_cols=259 Identities=27% Similarity=0.429 Sum_probs=227.8
Q ss_pred ccccceeEeeeeccCCcEEEEEEEEeC-CceEEEEEEecccC-CHHHHHHHHHHHHHHHhCCCCceeeEeceeecCCceE
Q 003963 502 ILWEDLTIGEQIGQGSCGTVYHAVWYG-SQDVAVKVFSRQEY-SDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLC 579 (783)
Q Consensus 502 ~~~~~y~i~~~LG~G~fG~Vy~a~~~~-~~~vAiK~i~~~~~-~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~ 579 (783)
...++|.+.+.||+|+||.||++.+.. ++.||+|++..... .......+.+|+.+++.++||||+++++++...+.+|
T Consensus 38 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 117 (335)
T 2owb_A 38 RSRRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVF 117 (335)
T ss_dssp TTTEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEE
T ss_pred ccCCceEEEEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEE
Confidence 445789999999999999999999865 46799999976643 3456678899999999999999999999999999999
Q ss_pred EEEEecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCcccccc
Q 003963 580 IVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHET 659 (783)
Q Consensus 580 lV~E~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~~~ 659 (783)
+||||+++++|.+++... ..+++..++.++.||+.||.|||+++ |+||||||+|||++.++.+||+|||++......
T Consensus 118 lv~e~~~~~~L~~~~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~~--ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~ 194 (335)
T 2owb_A 118 VVLELCRRRSLLELHKRR-KALTEPEARYYLRQIVLGCQYLHRNR--VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYD 194 (335)
T ss_dssp EEECCCTTCBHHHHHHHH-CSCCHHHHHHHHHHHHHHHHHHHHTT--EECSCCCGGGEEECTTCCEEECCCTTCEECCST
T ss_pred EEEecCCCCCHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHHCC--CEecCCCchhEEEcCCCCEEEeeccCceecccC
Confidence 999999999999998764 46899999999999999999999998 999999999999999999999999999876544
Q ss_pred cccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhcccccccCCCCCCHHHHHHH
Q 003963 660 YLTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAAIV 739 (783)
Q Consensus 660 ~~~~~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~l~~LI 739 (783)
........||+.|+|||++.+..++.++|||||||++|+|++|..||...........+. .....++..+++.+.+||
T Consensus 195 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~li 272 (335)
T 2owb_A 195 GERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIK--KNEYSIPKHINPVAASLI 272 (335)
T ss_dssp TCCBCCCCSCCSSCCHHHHHTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHH--HTCCCCCTTSCHHHHHHH
T ss_pred cccccccCCCccccCHHHhccCCCCchhhHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHh--cCCCCCCccCCHHHHHHH
Confidence 444445679999999999999999999999999999999999999999887766655543 234567788999999999
Q ss_pred HHhhhhCCCCCCCHHHHHHHHHHHHHHHhhcC
Q 003963 740 ESCWHSDPQCRPSFQELVDKLRDLQRQYFQAS 771 (783)
Q Consensus 740 ~~cL~~dP~~RPsa~ell~~L~~L~~~~f~~~ 771 (783)
.+||+.||.+||++.++ ++|+||+..
T Consensus 273 ~~~l~~dp~~Rps~~el------l~~~~~~~~ 298 (335)
T 2owb_A 273 QKMLQTDPTARPTINEL------LNDEFFTSG 298 (335)
T ss_dssp HHHTCSSGGGSCCGGGG------GGSHHHHTS
T ss_pred HHHccCChhHCcCHHHH------hcCccccCC
Confidence 99999999999999999 678999764
No 71
>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}
Probab=100.00 E-value=2.1e-43 Score=386.06 Aligned_cols=257 Identities=29% Similarity=0.490 Sum_probs=218.7
Q ss_pred cccceeEeeeeccCCcEEEEEEEEeC-CceEEEEEEecccCCH-HHHHHHHHHHHHHHhCCCCceeeEeceeecCCceEE
Q 003963 503 LWEDLTIGEQIGQGSCGTVYHAVWYG-SQDVAVKVFSRQEYSD-EVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCI 580 (783)
Q Consensus 503 ~~~~y~i~~~LG~G~fG~Vy~a~~~~-~~~vAiK~i~~~~~~~-~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~l 580 (783)
..++|++.+.||+|+||.||+|.+.. ++.||||++....... .....+.+|+.+++.++||||+++++++.....+++
T Consensus 7 ~i~~Y~i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~l 86 (336)
T 3h4j_B 7 HIGPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITTPTDIVM 86 (336)
T ss_dssp EETTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEE
T ss_pred ccCCEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEE
Confidence 45789999999999999999999854 5789999987543211 123468899999999999999999999999999999
Q ss_pred EEEecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCccccccc
Q 003963 581 VTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETY 660 (783)
Q Consensus 581 V~E~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~ 660 (783)
||||+ +|+|.+++... ..+++..++.++.||+.||.|||++| |+||||||+|||++.++.+||+|||++.......
T Consensus 87 v~E~~-~g~l~~~l~~~-~~l~~~~~~~i~~qi~~aL~~LH~~g--ivH~Dlkp~NIll~~~~~~kl~DFG~s~~~~~~~ 162 (336)
T 3h4j_B 87 VIEYA-GGELFDYIVEK-KRMTEDEGRRFFQQIICAIEYCHRHK--IVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGN 162 (336)
T ss_dssp EECCC-CEEHHHHHHHH-CSCCHHHHHHHHHHHHHHHHHHHHHT--CCCCCCSTTTEEECTTCCEEECCSSCTBTTTTSB
T ss_pred EEECC-CCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCC--eEecCCchhhEEEcCCCCEEEEEeccceeccCCc
Confidence 99999 67999988764 45999999999999999999999999 9999999999999999999999999998655432
Q ss_pred ccccCCCCCCcccCcccccCCCC-CchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhcccccccCCCCCCHHHHHHH
Q 003963 661 LTTKTGKGTPQWMAPEVLRNEPS-DEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAAIV 739 (783)
Q Consensus 661 ~~~~~~~Gt~~Y~aPE~~~~~~~-s~~sDIwSLG~il~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~l~~LI 739 (783)
.....+||+.|+|||++.+..+ +.++|||||||++|+|++|..||...........+ ......+|..+++++.+||
T Consensus 163 -~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~~~~i--~~~~~~~p~~~s~~~~~li 239 (336)
T 3h4j_B 163 -FLKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPNLFKKV--NSCVYVMPDFLSPGAQSLI 239 (336)
T ss_dssp -TTCCCTTSTTTSCGGGSCCSGGGCHHHHHHHHHHHHHHHHHSSCSSBCSSSTTCBCCC--CSSCCCCCTTSCHHHHHHH
T ss_pred -ccccccCCcCcCCHHHHcCCCCCCCccchhHHHHHHHHHHhCCCCCCCccHHHHHHHH--HcCCCCCcccCCHHHHHHH
Confidence 3345689999999999998876 78999999999999999999999876544332222 2234567788999999999
Q ss_pred HHhhhhCCCCCCCHHHHHHHHHHHHHHHhhcCc
Q 003963 740 ESCWHSDPQCRPSFQELVDKLRDLQRQYFQASR 772 (783)
Q Consensus 740 ~~cL~~dP~~RPsa~ell~~L~~L~~~~f~~~~ 772 (783)
.+||..||.+|||+.++ ++|+||+...
T Consensus 240 ~~~L~~dP~~Rpt~~ei------l~hp~~~~~~ 266 (336)
T 3h4j_B 240 RRMIVADPMQRITIQEI------RRDPWFNVNL 266 (336)
T ss_dssp HTTSCSSGGGSCCHHHH------TTCHHHHTTC
T ss_pred HHHcCCChhHCcCHHHH------HhChhhccCC
Confidence 99999999999999999 6789997643
No 72
>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*
Probab=100.00 E-value=1.2e-42 Score=377.60 Aligned_cols=259 Identities=25% Similarity=0.387 Sum_probs=214.8
Q ss_pred ccceeEeeeeccCCcEEEEEEEEe-CCceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEeceeecCCceEEEE
Q 003963 504 WEDLTIGEQIGQGSCGTVYHAVWY-GSQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIVT 582 (783)
Q Consensus 504 ~~~y~i~~~LG~G~fG~Vy~a~~~-~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lV~ 582 (783)
.++|++.++||+|+||.||+|.+. .++.||||++...... ...+.+.+|+.+++.++||||+++++++...+..|+||
T Consensus 6 ~~~y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~ 84 (323)
T 3tki_A 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAV-DCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFL 84 (323)
T ss_dssp TTCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC--------CHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hhhceeeeEEecCCCEEEEEEEECCCCcEEEEEEEEccccc-chHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEEE
Confidence 478999999999999999999986 4577999998755432 23356889999999999999999999999999999999
Q ss_pred EecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCccccccc--
Q 003963 583 EFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETY-- 660 (783)
Q Consensus 583 E~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~-- 660 (783)
|||++++|.+++... ..+++..++.++.||+.||+|||+++ |+||||||+||||+.++.+||+|||++.......
T Consensus 85 e~~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~aL~~LH~~g--ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~ 161 (323)
T 3tki_A 85 EYCSGGELFDRIEPD-IGMPEPDAQRFFHQLMAGVVYLHGIG--ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRE 161 (323)
T ss_dssp ECCTTEEGGGGSBTT-TBCCHHHHHHHHHHHHHHHHHHHHTT--EECSCCSGGGEEECTTCCEEECCCTTCEECEETTEE
T ss_pred EcCCCCcHHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHHHCC--ccccccchHHEEEeCCCCEEEEEeeccceeccCCcc
Confidence 999999999999753 45999999999999999999999998 9999999999999999999999999997654221
Q ss_pred ccccCCCCCCcccCcccccCCCC-CchhHHHHHHHHHHHHHcCCCCCCCCChH-HHHHHhhcccccccCCCCCCHHHHHH
Q 003963 661 LTTKTGKGTPQWMAPEVLRNEPS-DEKSDVYSFGVILWELATEKIPWDNLNSM-QVIGAVGFMNQRLEIPKDVDPRWAAI 738 (783)
Q Consensus 661 ~~~~~~~Gt~~Y~aPE~~~~~~~-s~~sDIwSLG~il~elltG~~Pf~~~~~~-~~~~~i~~~~~~~~~~~~~s~~l~~L 738 (783)
......+||+.|+|||++.+..+ +.++|||||||++|+|++|..||...... ..................+++.+.+|
T Consensus 162 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 241 (323)
T 3tki_A 162 RLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLAL 241 (323)
T ss_dssp CCBCSCCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSCTTSHHHHHHHTTCTTSTTGGGSCHHHHHH
T ss_pred cccCCCccCcCccCcHHhccCCCCCCcccHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHhcccccCCccccCCHHHHHH
Confidence 22335679999999999988775 77999999999999999999999766543 22222222222233345689999999
Q ss_pred HHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhcCc
Q 003963 739 VESCWHSDPQCRPSFQELVDKLRDLQRQYFQASR 772 (783)
Q Consensus 739 I~~cL~~dP~~RPsa~ell~~L~~L~~~~f~~~~ 772 (783)
|.+||..||.+|||+.++ ++|+||+...
T Consensus 242 i~~~L~~dP~~R~t~~ei------l~h~~~~~~~ 269 (323)
T 3tki_A 242 LHKILVENPSARITIPDI------KKDRWYNKPL 269 (323)
T ss_dssp HHHHSCSSTTTSCCHHHH------TTCTTTTCCC
T ss_pred HHHHccCChhhCcCHHHH------hhChhhcccc
Confidence 999999999999999999 6789997543
No 73
>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0
Probab=100.00 E-value=2.5e-42 Score=363.63 Aligned_cols=258 Identities=39% Similarity=0.696 Sum_probs=212.9
Q ss_pred cccccceeEeeeeccCCcEEEEEEEEeCCceEEEEEEecccCC--HHHHHHHHHHHHHHHhCCCCceeeEeceeecCCce
Q 003963 501 EILWEDLTIGEQIGQGSCGTVYHAVWYGSQDVAVKVFSRQEYS--DEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRL 578 (783)
Q Consensus 501 e~~~~~y~i~~~LG~G~fG~Vy~a~~~~~~~vAiK~i~~~~~~--~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~ 578 (783)
++..++|++.++||+|+||.||+|.+. ++.||||++...... ....+.+.+|+.+++.++||||+++++++...+..
T Consensus 3 ~~~~~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~ 81 (271)
T 3dtc_A 3 EIDFAELTLEEIIGIGGFGKVYRAFWI-GDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNL 81 (271)
T ss_dssp BCCTTSEEEEEEEEEETTEEEEEEEET-TEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEECCC--C
T ss_pred ccchhheeeeeeeccCCCeEEEEEEEc-CCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCCce
Confidence 455689999999999999999999975 668999998765332 23346788999999999999999999999999999
Q ss_pred EEEEEecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCC-CEEecCCCCCCEEEcC--------CCcEEEEe
Q 003963 579 CIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNP-PIIHRDLKSSNLLVDK--------HWTVKVGD 649 (783)
Q Consensus 579 ~lV~E~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~-~IvHrDIKp~NILl~~--------~~~vkL~D 649 (783)
++||||+++++|.+++.. ..+++..++.++.||+.||.|||+++. +|+||||||+|||++. ++.+||+|
T Consensus 82 ~lv~e~~~~~~L~~~~~~--~~~~~~~~~~i~~~l~~~l~~lH~~~~~~i~H~dikp~Nil~~~~~~~~~~~~~~~kl~D 159 (271)
T 3dtc_A 82 CLVMEFARGGPLNRVLSG--KRIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITD 159 (271)
T ss_dssp EEEEECCTTEEHHHHHTS--SCCCHHHHHHHHHHHHHHHHHHHHSSSSCCCCSCCSGGGEEESSCCSSSCCSSCCEEECC
T ss_pred EEEEEcCCCCCHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCchHHEEEecccccccccCcceEEcc
Confidence 999999999999999964 468999999999999999999999873 3889999999999986 77899999
Q ss_pred cCCCcccccccccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhcccccccCCC
Q 003963 650 FGLSRLKHETYLTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLEIPK 729 (783)
Q Consensus 650 FGla~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~ 729 (783)
||++....... .....||+.|+|||++.+..++.++|||||||++|+|++|+.||...+.......+........++.
T Consensus 160 fg~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 237 (271)
T 3dtc_A 160 FGLAREWHRTT--KMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLAVAYGVAMNKLALPIPS 237 (271)
T ss_dssp CCC---------------CCGGGSCHHHHHHCCCSHHHHHHHHHHHHHHHHHCCCTTTTSCHHHHHHHHHTSCCCCCCCT
T ss_pred CCccccccccc--ccCCCCccceeCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHhhhcCCCCCCCCc
Confidence 99997654432 2245789999999999999999999999999999999999999999888777766655555677788
Q ss_pred CCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHH
Q 003963 730 DVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDL 763 (783)
Q Consensus 730 ~~s~~l~~LI~~cL~~dP~~RPsa~ell~~L~~L 763 (783)
.+++.+.+||.+||..||.+|||+.+++++|++|
T Consensus 238 ~~~~~~~~li~~~l~~~p~~Rps~~e~l~~L~~l 271 (271)
T 3dtc_A 238 TCPEPFAKLMEDCWNPDPHSRPSFTNILDQLTTI 271 (271)
T ss_dssp TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHC-
T ss_pred ccCHHHHHHHHHHhcCCcccCcCHHHHHHHHhcC
Confidence 8999999999999999999999999999998754
No 74
>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}
Probab=100.00 E-value=4.1e-42 Score=376.18 Aligned_cols=261 Identities=24% Similarity=0.387 Sum_probs=218.4
Q ss_pred cccccceeEeeeeccCCcEEEEEEEEeCCceEEEEEEecccCCHHHHHHHHHHHHHHHhCCC--CceeeEeceeecCCce
Q 003963 501 EILWEDLTIGEQIGQGSCGTVYHAVWYGSQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRH--PNVLLFMGAVTSPQRL 578 (783)
Q Consensus 501 e~~~~~y~i~~~LG~G~fG~Vy~a~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~H--pnIv~l~~~~~~~~~~ 578 (783)
++..++|++.++||+|+||.||++.+..++.||||++............+.+|+.+|+.++| |||+++++++.....+
T Consensus 5 ~~~~~~y~i~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~ 84 (343)
T 3dbq_A 5 SVKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYI 84 (343)
T ss_dssp ESSSCEEEEEEEESCCSSEEEEEEECTTSCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEE
T ss_pred eeecCEEEEEEEEecCCCeEEEEEEeCCCCEEEEEEeeccccchHHHHHHHHHHHHHHhhhhcCCceEEEeeeEeeCCEE
Confidence 34567899999999999999999998777889999998877777777889999999999986 9999999999999999
Q ss_pred EEEEEecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCccccc
Q 003963 579 CIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHE 658 (783)
Q Consensus 579 ~lV~E~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~~ 658 (783)
|+|||+. +++|.+++... ..+++..++.++.||+.||.|||+++ |+||||||+||||+ ++.+||+|||++.....
T Consensus 85 ~lv~e~~-~~~L~~~l~~~-~~~~~~~~~~i~~qi~~al~~lH~~~--iiHrDikp~NIll~-~~~~kl~DFG~a~~~~~ 159 (343)
T 3dbq_A 85 YMVMECG-NIDLNSWLKKK-KSIDPWERKSYWKNMLEAVHTIHQHG--IVHSDLKPANFLIV-DGMLKLIDFGIANQMQP 159 (343)
T ss_dssp EEEECCC-SEEHHHHHHHS-CCCCHHHHHHHHHHHHHHHHHHHHTT--CCCCCCCGGGEEEE-TTEEEECCCSSSCCC--
T ss_pred EEEEeCC-CCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCC--eecCCCCcceEEEE-CCcEEEeecccccccCc
Confidence 9999955 78999999864 46899999999999999999999998 99999999999997 57899999999986543
Q ss_pred ccc--cccCCCCCCcccCcccccC-----------CCCCchhHHHHHHHHHHHHHcCCCCCCCCCh-HHHHHHhhccccc
Q 003963 659 TYL--TTKTGKGTPQWMAPEVLRN-----------EPSDEKSDVYSFGVILWELATEKIPWDNLNS-MQVIGAVGFMNQR 724 (783)
Q Consensus 659 ~~~--~~~~~~Gt~~Y~aPE~~~~-----------~~~s~~sDIwSLG~il~elltG~~Pf~~~~~-~~~~~~i~~~~~~ 724 (783)
... .....+||+.|+|||++.+ ..++.++|||||||++|+|++|..||..... ......+......
T Consensus 160 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~ 239 (343)
T 3dbq_A 160 DTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHE 239 (343)
T ss_dssp ----------CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHHHHHCTTSC
T ss_pred ccccccCCCCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHHhCCCcchhhhhHHHHHHHHhcCCcc
Confidence 322 2235579999999999865 6688999999999999999999999987543 3333344334455
Q ss_pred ccCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhcCc
Q 003963 725 LEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQASR 772 (783)
Q Consensus 725 ~~~~~~~s~~l~~LI~~cL~~dP~~RPsa~ell~~L~~L~~~~f~~~~ 772 (783)
..++...+.++.+||.+||..||.+|||+.++ |+|+||+...
T Consensus 240 ~~~~~~~~~~l~~li~~~L~~dp~~Rpt~~e~------l~hp~~~~~~ 281 (343)
T 3dbq_A 240 IEFPDIPEKDLQDVLKCCLKRDPKQRISIPEL------LAHPYVQIQT 281 (343)
T ss_dssp CCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHH------HTSHHHHSCC
T ss_pred cCCcccCCHHHHHHHHHHcCCChhHCCCHHHH------HhCccccccC
Confidence 66778889999999999999999999999999 6789997543
No 75
>2eue_A Carbon catabolite derepressing protein kinase; kinase domain; 2.20A {Saccharomyces cerevisiae} PDB: 3fam_A 3hyh_A 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=1.5e-42 Score=366.70 Aligned_cols=259 Identities=28% Similarity=0.485 Sum_probs=203.2
Q ss_pred ccccceeEeeeeccCCcEEEEEEEEeC-CceEEEEEEecccCCH-HHHHHHHHHHHHHHhCCCCceeeEeceeecCCceE
Q 003963 502 ILWEDLTIGEQIGQGSCGTVYHAVWYG-SQDVAVKVFSRQEYSD-EVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLC 579 (783)
Q Consensus 502 ~~~~~y~i~~~LG~G~fG~Vy~a~~~~-~~~vAiK~i~~~~~~~-~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~ 579 (783)
...++|++.++||+|+||.||+|.+.. ++.||+|++....... .....+.+|+.+++.++||||+++++++...+..+
T Consensus 10 ~~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 89 (275)
T 2eue_A 10 AHIGNYQIVKTLGEGSFAKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEII 89 (275)
T ss_dssp CBCCCBCCCC---------EEEEECTTTCCEEEEEEECSCC-----CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSCEE
T ss_pred CcccceEEEEEEEcCCCEEEEEEEECCCCCEEEEEEEEhhhcchHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCeEE
Confidence 345789999999999999999998754 5789999997655332 34567889999999999999999999999999999
Q ss_pred EEEEecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCcccccc
Q 003963 580 IVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHET 659 (783)
Q Consensus 580 lV~E~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~~~ 659 (783)
+||||+ +++|.+++... ..+++..++.++.||+.||.|||+++ |+||||||+|||++.++.+||+|||++......
T Consensus 90 lv~e~~-~~~l~~~~~~~-~~~~~~~~~~~~~~i~~~l~~LH~~~--i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~ 165 (275)
T 2eue_A 90 MVIEYA-GNELFDYIVQR-DKMSEQEARRFFQQIISAVEYCHRHK--IVHRDLKPENLLLDEHLNVKIADFGLSNIMTDG 165 (275)
T ss_dssp EEEECC-CEEHHHHHHTS-SSCCHHHHHHHHHHHHHHHHHHHHTT--CCCCCCSGGGEEECTTSCEEECCSSCC------
T ss_pred EEehhc-CCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCC--CeeccCChHhEEECCCCCEEEeecccceeccCc
Confidence 999999 67888888664 46999999999999999999999999 999999999999999999999999999765543
Q ss_pred cccccCCCCCCcccCcccccCCCC-CchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhcccccccCCCCCCHHHHHH
Q 003963 660 YLTTKTGKGTPQWMAPEVLRNEPS-DEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAAI 738 (783)
Q Consensus 660 ~~~~~~~~Gt~~Y~aPE~~~~~~~-s~~sDIwSLG~il~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~l~~L 738 (783)
. ......||+.|+|||++.+..+ +.++|||||||++|+|++|+.||...........+. .....++..+++.+.+|
T Consensus 166 ~-~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~l 242 (275)
T 2eue_A 166 N-FLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNIS--NGVYTLPKFLSPGAAGL 242 (275)
T ss_dssp ----------CTTCCHHHHCC-----THHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHH--HTCCCCCTTSCHHHHHH
T ss_pred c-cccCCCCCcCcCCceeeeCCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH--hCCCCCCccCCHHHHHH
Confidence 2 2234568999999999988775 789999999999999999999999888777665553 34556788899999999
Q ss_pred HHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhcCcC
Q 003963 739 VESCWHSDPQCRPSFQELVDKLRDLQRQYFQASRS 773 (783)
Q Consensus 739 I~~cL~~dP~~RPsa~ell~~L~~L~~~~f~~~~~ 773 (783)
|.+||+.||.+|||+.++ ++|+||+...+
T Consensus 243 i~~~l~~dP~~Rps~~e~------l~h~~f~~~~~ 271 (275)
T 2eue_A 243 IKRMLIVNPLNRISIHEI------MQDDWFKVDLP 271 (275)
T ss_dssp HHHHSCSSGGGSCCHHHH------TTCHHHHTTCC
T ss_pred HHHHhhcCHhHCCCHHHH------hhCCeecccch
Confidence 999999999999999999 78999987554
No 76
>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*
Probab=100.00 E-value=5.1e-42 Score=368.75 Aligned_cols=266 Identities=27% Similarity=0.477 Sum_probs=226.9
Q ss_pred ccccccccceeEeeeeccCCcEEEEEEEEeC------CceEEEEEEecccCCHHHHHHHHHHHHHHHhC-CCCceeeEec
Q 003963 498 LDYEILWEDLTIGEQIGQGSCGTVYHAVWYG------SQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRL-RHPNVLLFMG 570 (783)
Q Consensus 498 ~~~e~~~~~y~i~~~LG~G~fG~Vy~a~~~~------~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l-~HpnIv~l~~ 570 (783)
..+++..++|++.+.||+|+||.||+|.+.. ++.||||++.... .....+.+.+|+.+++.+ +||||+++++
T Consensus 16 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~~h~~i~~~~~ 94 (313)
T 1t46_A 16 HKWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSA-HLTEREALMSELKVLSYLGNHMNIVNLLG 94 (313)
T ss_dssp GGGBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTC-CHHHHHHHHHHHHHHHHHCCCTTBCCEEE
T ss_pred cccccChhhhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcch-hHHHHHHHHHHHHHHhhcccCCCeeeEEE
Confidence 4567778899999999999999999998632 3579999997554 344567889999999999 8999999999
Q ss_pred eeecCCceEEEEEecCCCCHHHHHhhcCC-----------------cchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCC
Q 003963 571 AVTSPQRLCIVTEFLPRGSLFRLLQRNTT-----------------KLDWRRRILMALDIARGVSYLHHCNPPIIHRDLK 633 (783)
Q Consensus 571 ~~~~~~~~~lV~E~~~ggsL~~~L~~~~~-----------------~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIK 633 (783)
++...+..++||||+++++|.+++..... .+++..++.++.||+.||.|||+++ |+|||||
T Consensus 95 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~--i~H~dlk 172 (313)
T 1t46_A 95 ACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKN--CIHRDLA 172 (313)
T ss_dssp EECSSSSCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCS
T ss_pred EEecCCCcEEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHCC--eecCCCc
Confidence 99999999999999999999999976543 4899999999999999999999998 9999999
Q ss_pred CCCEEEcCCCcEEEEecCCCcccccccc--cccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCC
Q 003963 634 SSNLLVDKHWTVKVGDFGLSRLKHETYL--TTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELAT-EKIPWDNLN 710 (783)
Q Consensus 634 p~NILl~~~~~vkL~DFGla~~~~~~~~--~~~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~ellt-G~~Pf~~~~ 710 (783)
|+|||++.++.+||+|||++........ ......||+.|+|||++.+..++.++|||||||++|+|++ |..||....
T Consensus 173 p~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~ 252 (313)
T 1t46_A 173 ARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMP 252 (313)
T ss_dssp GGGEEEETTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCC
T ss_pred cceEEEcCCCCEEEccccccccccccccceeccCCCCcceeeChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCCccc
Confidence 9999999999999999999876554322 1223456789999999999999999999999999999999 999998776
Q ss_pred hHHHHHHhhcccccccCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHH
Q 003963 711 SMQVIGAVGFMNQRLEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQ 766 (783)
Q Consensus 711 ~~~~~~~i~~~~~~~~~~~~~s~~l~~LI~~cL~~dP~~RPsa~ell~~L~~L~~~ 766 (783)
.................+..+++.+.+||.+||..||.+|||+.++++.|+++...
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~ 308 (313)
T 1t46_A 253 VDSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQISE 308 (313)
T ss_dssp SSHHHHHHHHHTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred chhHHHHHhccCCCCCCcccCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHHH
Confidence 55444343333344556778999999999999999999999999999999887765
No 77
>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...
Probab=100.00 E-value=3.5e-42 Score=367.68 Aligned_cols=261 Identities=30% Similarity=0.508 Sum_probs=216.3
Q ss_pred cccccceeEeeeeccCCcEEEEEEEEe-----CCceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEeceeec-
Q 003963 501 EILWEDLTIGEQIGQGSCGTVYHAVWY-----GSQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTS- 574 (783)
Q Consensus 501 e~~~~~y~i~~~LG~G~fG~Vy~a~~~-----~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~- 574 (783)
++..++|++.++||+|+||.||+|.+. .++.||||++... .....+.+.+|+.+++.++||||+++++++..
T Consensus 6 ~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~ 83 (295)
T 3ugc_A 6 QFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS--TEEHLRDFEREIEILKSLQHDNIVKYKGVCYSA 83 (295)
T ss_dssp CCCGGGEEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCC--CHHHHHHHHHHHHHHHTCCCTTBCCEEEEECHH
T ss_pred cCCHHHhhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccC--CHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecC
Confidence 345689999999999999999999852 3567999998654 35556789999999999999999999999854
Q ss_pred -CCceEEEEEecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCC
Q 003963 575 -PQRLCIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLS 653 (783)
Q Consensus 575 -~~~~~lV~E~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla 653 (783)
...+++||||+++++|.+++......+++..++.++.||+.||.|||+++ |+||||||+|||++.++.+||+|||++
T Consensus 84 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~--ivH~Dikp~Nil~~~~~~~kl~Dfg~~ 161 (295)
T 3ugc_A 84 GRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKR--YIHRDLATRNILVENENRVKIGDFGLT 161 (295)
T ss_dssp HHTSCEEEEECCTTCBHHHHHHHCGGGCCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCSGGGEEEEETTEEEECCCCSC
T ss_pred CCCceEEEEEeCCCCCHHHHHHhcccccCHHHHHHHHHHHHHHHHHHhcCC--cccCCCCHhhEEEcCCCeEEEccCccc
Confidence 35689999999999999999887777999999999999999999999998 999999999999999999999999999
Q ss_pred ccccccc---ccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChH----------------HH
Q 003963 654 RLKHETY---LTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSM----------------QV 714 (783)
Q Consensus 654 ~~~~~~~---~~~~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~elltG~~Pf~~~~~~----------------~~ 714 (783)
....... .......++..|+|||++.+..++.++|||||||++|+|++|..||...... ..
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (295)
T 3ugc_A 162 KVLPQDKEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHL 241 (295)
T ss_dssp C-------------CTTCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTTCTTCSHHHHHHHHHCTTCCTHHHHHHH
T ss_pred ccccCCcceeeeccCCCCccceeCcHHhcCCCCChHHHHHHHHHHHHHHHhcccccCCChHHHHhhhcCccccchhHHHH
Confidence 8654332 1222345677899999999999999999999999999999999998643221 11
Q ss_pred HHHhhcccccccCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHH
Q 003963 715 IGAVGFMNQRLEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQ 766 (783)
Q Consensus 715 ~~~i~~~~~~~~~~~~~s~~l~~LI~~cL~~dP~~RPsa~ell~~L~~L~~~ 766 (783)
... .........+..+++++.+||.+||..||.+|||+.++++.|+++...
T Consensus 242 ~~~-~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~el~~~L~~l~~~ 292 (295)
T 3ugc_A 242 IEL-LKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDN 292 (295)
T ss_dssp HHH-HHTTCCCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred HHH-HhccCcCCCCcCcCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHHh
Confidence 111 112335567788999999999999999999999999999999998764
No 78
>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...
Probab=100.00 E-value=3e-42 Score=367.61 Aligned_cols=262 Identities=37% Similarity=0.642 Sum_probs=211.7
Q ss_pred ccccccccceeEeeeeccCCcEEEEEEEEeCCceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEeceeecCCc
Q 003963 498 LDYEILWEDLTIGEQIGQGSCGTVYHAVWYGSQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQR 577 (783)
Q Consensus 498 ~~~e~~~~~y~i~~~LG~G~fG~Vy~a~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~ 577 (783)
..+++..++|++.++||+|+||.||++.+. ..||+|++..........+.+.+|+.+++.++||||+++++++ ....
T Consensus 17 ~~~ei~~~~y~~~~~lG~G~~g~Vy~~~~~--~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-~~~~ 93 (289)
T 3og7_A 17 DDWEIPDGQITVGQRIGSGSFGTVYKGKWH--GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS-TAPQ 93 (289)
T ss_dssp -CCBCCTTSCEEEEEEEECSSEEEEEEESS--SEEEEEEESCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEE-CSSS
T ss_pred CCCccCccceeeeeEecCCCCeEEEEEEEc--CceEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCcEEEEEeec-cCCc
Confidence 455778899999999999999999999754 3699999987777777788899999999999999999999965 4567
Q ss_pred eEEEEEecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCcccc
Q 003963 578 LCIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKH 657 (783)
Q Consensus 578 ~~lV~E~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~ 657 (783)
.++||||+++++|.+++......+++..++.++.||+.||.|||+++ |+||||||+||||+.++.+||+|||++....
T Consensus 94 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~lH~~~--i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 171 (289)
T 3og7_A 94 LAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAKS--IIHRDLKSNNIFLHEDNTVKIGDFGLATEKS 171 (289)
T ss_dssp CEEEEECCCEEEHHHHHTTC---CCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCCGGGEEEETTTEEEECCCC------
T ss_pred cEEEEEecCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhCC--cccccCccceEEECCCCCEEEccceeccccc
Confidence 89999999999999999877778999999999999999999999998 9999999999999999999999999987544
Q ss_pred cc--cccccCCCCCCcccCccccc---CCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHh-hccc---ccccCC
Q 003963 658 ET--YLTTKTGKGTPQWMAPEVLR---NEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAV-GFMN---QRLEIP 728 (783)
Q Consensus 658 ~~--~~~~~~~~Gt~~Y~aPE~~~---~~~~s~~sDIwSLG~il~elltG~~Pf~~~~~~~~~~~i-~~~~---~~~~~~ 728 (783)
.. ........||+.|+|||++. +..++.++|||||||++|+|++|..||............ .... ....++
T Consensus 172 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (289)
T 3og7_A 172 RWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSLSPDLSKVR 251 (289)
T ss_dssp ------------CCCTTCCHHHHC----CCSCHHHHHHHHHHHHHHHHHSSCTTSSCCCHHHHHHHHHHTSCCCCTTSSC
T ss_pred cccccccccccCCCccccCchhhcccCCCCCCcccchHHHHHHHHHHHHCCCCccccchHHHHHHHhcccccCcchhhcc
Confidence 32 11223456899999999986 667888999999999999999999999876654433332 2111 122344
Q ss_pred CCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHH
Q 003963 729 KDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQ 764 (783)
Q Consensus 729 ~~~s~~l~~LI~~cL~~dP~~RPsa~ell~~L~~L~ 764 (783)
..+++.+.+||.+||..||.+||++.++++.|+++.
T Consensus 252 ~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~l~ 287 (289)
T 3og7_A 252 SNCPKRMKRLMAECLKKKRDERPSFPRILAEIEELA 287 (289)
T ss_dssp TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTT
T ss_pred ccCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHh
Confidence 578999999999999999999999999999998764
No 79
>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...
Probab=100.00 E-value=2.8e-42 Score=382.52 Aligned_cols=265 Identities=30% Similarity=0.524 Sum_probs=218.6
Q ss_pred cccccccceeEeeeeccCCcEEEEEEEEe----CCceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEeceeec
Q 003963 499 DYEILWEDLTIGEQIGQGSCGTVYHAVWY----GSQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTS 574 (783)
Q Consensus 499 ~~e~~~~~y~i~~~LG~G~fG~Vy~a~~~----~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~ 574 (783)
..++...+|++.+.||+|+||.||+|.+. .+..||||++.... .....+.+.+|+.+++.++||||+++++++..
T Consensus 39 ~~~~~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~ 117 (373)
T 2qol_A 39 AKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGY-TEKQRRDFLGEASIMGQFDHPNIIRLEGVVTK 117 (373)
T ss_dssp SCBCCGGGCCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTC-CHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS
T ss_pred HhhcCHhhceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCcc-CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEee
Confidence 33556679999999999999999999875 34569999987543 45566789999999999999999999999999
Q ss_pred CCceEEEEEecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCc
Q 003963 575 PQRLCIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSR 654 (783)
Q Consensus 575 ~~~~~lV~E~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~ 654 (783)
.+.+++||||+++++|.+++......+++..++.++.||+.||+|||+++ |+||||||+||||+.++.+||+|||+++
T Consensus 118 ~~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~--ivH~Dlkp~NIll~~~~~~kl~Dfg~a~ 195 (373)
T 2qol_A 118 SKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMG--YVHRDLAARNILINSNLVCKVSDFGLGR 195 (373)
T ss_dssp SSSCEEEEECCTTCBHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCCGGGEEECTTCCEEECCC----
T ss_pred CCceEEEEeCCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCC--eeCCCCCcceEEEcCCCCEEECcCcccc
Confidence 99999999999999999999877777999999999999999999999998 9999999999999999999999999998
Q ss_pred ccccccc---cccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCChHHHHHHhhcccccccCCCC
Q 003963 655 LKHETYL---TTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELAT-EKIPWDNLNSMQVIGAVGFMNQRLEIPKD 730 (783)
Q Consensus 655 ~~~~~~~---~~~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~ 730 (783)
....... ......+++.|+|||++.+..++.++|||||||++|||++ |+.||...........+.. ......+..
T Consensus 196 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt~g~~P~~~~~~~~~~~~i~~-~~~~~~~~~ 274 (373)
T 2qol_A 196 VLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDE-GYRLPPPMD 274 (373)
T ss_dssp ------------------CTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTC-CTTTTCCHHHHHHHHHT-TEECCCCTT
T ss_pred ccccCCccceeccCCCcCCCccChhhhccCCcCchhcHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHc-CCCCCCCcc
Confidence 6544321 1122345778999999999999999999999999999998 9999998888777666532 234556678
Q ss_pred CCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHH
Q 003963 731 VDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQY 767 (783)
Q Consensus 731 ~s~~l~~LI~~cL~~dP~~RPsa~ell~~L~~L~~~~ 767 (783)
++..+.+||.+||+.||.+||++.++++.|+++....
T Consensus 275 ~~~~l~~li~~cl~~dp~~RPs~~~i~~~L~~~~~~~ 311 (373)
T 2qol_A 275 CPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRNP 311 (373)
T ss_dssp CBHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHCG
T ss_pred ccHHHHHHHHHHhCcChhhCcCHHHHHHHHHHHHhCc
Confidence 9999999999999999999999999999999887643
No 80
>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*
Probab=100.00 E-value=5.9e-42 Score=371.74 Aligned_cols=254 Identities=27% Similarity=0.407 Sum_probs=220.3
Q ss_pred ceeEeeeeccCCcEEEEEEEEe-CCceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEeceeecCCceEEEEEe
Q 003963 506 DLTIGEQIGQGSCGTVYHAVWY-GSQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIVTEF 584 (783)
Q Consensus 506 ~y~i~~~LG~G~fG~Vy~a~~~-~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lV~E~ 584 (783)
.|...++||+|+||.||+|.+. .++.||||++....... ...+.+|+.+++.++||||+++++++...+..++||||
T Consensus 46 ~~~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 123 (321)
T 2c30_A 46 LLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQR--RELLFNEVVIMRDYQHFNVVEMYKSYLVGEELWVLMEF 123 (321)
T ss_dssp HEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCS--HHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEECC
T ss_pred hhhccEEeccCCCeEEEEEEECCCCcEEEEEEEeccchhH--HHHHHHHHHHHHhCCCCCcceEEEEEEECCEEEEEEec
Confidence 4788889999999999999986 46789999997654332 35678999999999999999999999999999999999
Q ss_pred cCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCccccccccccc
Q 003963 585 LPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETYLTTK 664 (783)
Q Consensus 585 ~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~~~~~ 664 (783)
+++++|.+++.. ..+++..++.++.||+.||.|||+++ |+||||||+||||+.++.+||+|||++...........
T Consensus 124 ~~~~~L~~~l~~--~~l~~~~~~~i~~qi~~~L~~LH~~~--ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~ 199 (321)
T 2c30_A 124 LQGGALTDIVSQ--VRLNEEQIATVCEAVLQALAYLHAQG--VIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPKRK 199 (321)
T ss_dssp CCSCBHHHHHTT--CCCCHHHHHHHHHHHHHHHHHHHHTT--EECCCCSGGGEEECTTCCEEECCCTTCEECCSSSCCBC
T ss_pred CCCCCHHHHHHh--cCCCHHHHHHHHHHHHHHHHHHHHCC--eecCCCCHHHEEECCCCcEEEeeeeeeeecccCccccc
Confidence 999999999875 35899999999999999999999998 99999999999999999999999999987655444445
Q ss_pred CCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhcccc-cccCCCCCCHHHHHHHHHhh
Q 003963 665 TGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQ-RLEIPKDVDPRWAAIVESCW 743 (783)
Q Consensus 665 ~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~elltG~~Pf~~~~~~~~~~~i~~~~~-~~~~~~~~s~~l~~LI~~cL 743 (783)
...||+.|+|||++.+..++.++|||||||++|+|++|..||...........+..... ....+..+++.+.+||.+||
T Consensus 200 ~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l 279 (321)
T 2c30_A 200 SLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMKRLRDSPPPKLKNSHKVSPVLRDFLERML 279 (321)
T ss_dssp CCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSSCCCCTTGGGSCHHHHHHHHHHS
T ss_pred cccCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCCCcCccccCCHHHHHHHHHHc
Confidence 66899999999999999999999999999999999999999998887766655532221 22334468899999999999
Q ss_pred hhCCCCCCCHHHHHHHHHHHHHHHhhcC
Q 003963 744 HSDPQCRPSFQELVDKLRDLQRQYFQAS 771 (783)
Q Consensus 744 ~~dP~~RPsa~ell~~L~~L~~~~f~~~ 771 (783)
..||.+|||+.++ +.|+||+..
T Consensus 280 ~~dp~~Rps~~el------l~hp~~~~~ 301 (321)
T 2c30_A 280 VRDPQERATAQEL------LDHPFLLQT 301 (321)
T ss_dssp CSSTTTSCCHHHH------HTSGGGGGC
T ss_pred cCChhhCcCHHHH------hcChhhccC
Confidence 9999999999999 678999754
No 81
>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=4.2e-42 Score=375.25 Aligned_cols=266 Identities=29% Similarity=0.470 Sum_probs=222.9
Q ss_pred ccccccccceeEeeeeccCCcEEEEEEEEeC------CceEEEEEEecccCCHHHHHHHHHHHHHHHhC-CCCceeeEec
Q 003963 498 LDYEILWEDLTIGEQIGQGSCGTVYHAVWYG------SQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRL-RHPNVLLFMG 570 (783)
Q Consensus 498 ~~~e~~~~~y~i~~~LG~G~fG~Vy~a~~~~------~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l-~HpnIv~l~~ 570 (783)
..+++..++|++.+.||+|+||.||+|.+.. +..||||++.... .......+.+|+.+++.+ +||||+++++
T Consensus 38 ~~~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~~hp~iv~~~~ 116 (344)
T 1rjb_A 38 LKWEFPRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKA-DSSEREALMSELKMMTQLGSHENIVNLLG 116 (344)
T ss_dssp GGGBCCGGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC-------CHHHHHHHHHHHHHCCCTTBCCEEE
T ss_pred cCcccCHHHceeeeeecCCCCceeEEeeeeccccCCcceEEEEEeccccc-CHHHHHHHHHHHHHHHhhcCCCCeeeEEE
Confidence 3567788999999999999999999999742 3469999997543 233456788999999999 8999999999
Q ss_pred eeecCCceEEEEEecCCCCHHHHHhhcCC----------------------cchHHHHHHHHHHHHHHHHHHHhCCCCEE
Q 003963 571 AVTSPQRLCIVTEFLPRGSLFRLLQRNTT----------------------KLDWRRRILMALDIARGVSYLHHCNPPII 628 (783)
Q Consensus 571 ~~~~~~~~~lV~E~~~ggsL~~~L~~~~~----------------------~l~~~~~~~i~~qi~~aL~~LH~~~~~Iv 628 (783)
++...+.+++||||+++|+|.+++..... .+++..++.++.||+.||.|||+++ |+
T Consensus 117 ~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~--iv 194 (344)
T 1rjb_A 117 ACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKS--CV 194 (344)
T ss_dssp EECSSSSCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHTT--EE
T ss_pred EEeeCCccEEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHHhCC--cc
Confidence 99999999999999999999999976542 3788999999999999999999998 99
Q ss_pred ecCCCCCCEEEcCCCcEEEEecCCCcccccccc--cccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHc-CCCC
Q 003963 629 HRDLKSSNLLVDKHWTVKVGDFGLSRLKHETYL--TTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELAT-EKIP 705 (783)
Q Consensus 629 HrDIKp~NILl~~~~~vkL~DFGla~~~~~~~~--~~~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~ellt-G~~P 705 (783)
||||||+||||+.++.+||+|||++........ ......||+.|+|||++.+..++.++|||||||++|+|++ |..|
T Consensus 195 H~Dikp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p 274 (344)
T 1rjb_A 195 HRDLAARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNP 274 (344)
T ss_dssp ETTCSGGGEEEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCS
T ss_pred cCCCChhhEEEcCCCcEEeCCCccCcccccCccceeccCccCccCccCHHHhccCCCChhHhHHHHHHHHHHHHcCCCCC
Confidence 999999999999999999999999976543321 1223456889999999999999999999999999999998 9999
Q ss_pred CCCCChHHHHHHhhcccccccCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHH
Q 003963 706 WDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQ 766 (783)
Q Consensus 706 f~~~~~~~~~~~i~~~~~~~~~~~~~s~~l~~LI~~cL~~dP~~RPsa~ell~~L~~L~~~ 766 (783)
|...........+.........+..+++++.+||.+||..||.+|||+.+++++|+.+...
T Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~ 335 (344)
T 1rjb_A 275 YPGIPVDANFYKLIQNGFKMDQPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSFLGCQLAD 335 (344)
T ss_dssp STTCCCSHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC--
T ss_pred cccCCcHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHHH
Confidence 9887655544444334445667788999999999999999999999999999999877554
No 82
>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...
Probab=100.00 E-value=2.4e-42 Score=365.93 Aligned_cols=260 Identities=29% Similarity=0.497 Sum_probs=222.7
Q ss_pred ccccceeEeeeeccCCcEEEEEEEEeCC-ceEEEEEEecccCCH-HHHHHHHHHHHHHHhCCCCceeeEeceeecCCceE
Q 003963 502 ILWEDLTIGEQIGQGSCGTVYHAVWYGS-QDVAVKVFSRQEYSD-EVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLC 579 (783)
Q Consensus 502 ~~~~~y~i~~~LG~G~fG~Vy~a~~~~~-~~vAiK~i~~~~~~~-~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~ 579 (783)
...++|++.+.||+|+||.||+|.+..+ ..||+|++....... .....+.+|+.+++.++||||+++++++......+
T Consensus 6 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 85 (279)
T 3fdn_A 6 WALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVY 85 (279)
T ss_dssp CCGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEE
T ss_pred eecccEEEeeEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcchhheEecCCEEE
Confidence 4568999999999999999999998664 579999987643222 22456889999999999999999999999999999
Q ss_pred EEEEecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCcccccc
Q 003963 580 IVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHET 659 (783)
Q Consensus 580 lV~E~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~~~ 659 (783)
+||||+++++|.+++... ..+++..++.++.||+.||.|||+.+ |+|+||||+||||+.++.++|+|||++......
T Consensus 86 lv~e~~~~~~l~~~l~~~-~~~~~~~~~~~~~qi~~~l~~LH~~~--i~H~dlkp~Nili~~~~~~~l~Dfg~~~~~~~~ 162 (279)
T 3fdn_A 86 LILEYAPLGTVYRELQKL-SKFDEQRTATYITELANALSYCHSKR--VIHRDIKPENLLLGSAGELKIADFGWSVHAPSS 162 (279)
T ss_dssp EEECCCTTEEHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHTTT--CEECCCCGGGEEECTTSCEEECSCCEESCC---
T ss_pred EEEecCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCC--EecccCChHhEEEcCCCCEEEEeccccccCCcc
Confidence 999999999999999764 45899999999999999999999998 999999999999999999999999988654433
Q ss_pred cccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhcccccccCCCCCCHHHHHHH
Q 003963 660 YLTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAAIV 739 (783)
Q Consensus 660 ~~~~~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~l~~LI 739 (783)
......|++.|+|||++.+..++.++|||||||++|+|++|..||...+.......+. .....++..+++.+.+||
T Consensus 163 --~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~li 238 (279)
T 3fdn_A 163 --RRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS--RVEFTFPDFVTEGARDLI 238 (279)
T ss_dssp -------CCCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHH--HTCCCCCTTSCHHHHHHH
T ss_pred --cccccCCCCCccCHhHhccCCCCccchhHhHHHHHHHHHHCCCCCCCCcHHHHHHHHH--hCCCCCCCcCCHHHHHHH
Confidence 2234578999999999999999999999999999999999999999888777666553 234566788999999999
Q ss_pred HHhhhhCCCCCCCHHHHHHHHHHHHHHHhhcCcCC
Q 003963 740 ESCWHSDPQCRPSFQELVDKLRDLQRQYFQASRST 774 (783)
Q Consensus 740 ~~cL~~dP~~RPsa~ell~~L~~L~~~~f~~~~~~ 774 (783)
.+||..||.+||++.++ ++|+||+...+.
T Consensus 239 ~~~l~~~p~~Rps~~e~------l~h~~~~~~~~~ 267 (279)
T 3fdn_A 239 SRLLKHNPSQRPMLREV------LEHPWITANSSK 267 (279)
T ss_dssp HHHCCSSGGGSCCHHHH------HHCHHHHHHCSS
T ss_pred HHHhccChhhCCCHHHH------hhCccccCCccC
Confidence 99999999999999999 678999776544
No 83
>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}
Probab=100.00 E-value=2.3e-42 Score=374.00 Aligned_cols=266 Identities=29% Similarity=0.475 Sum_probs=210.8
Q ss_pred cccccccceeEeeeeccCCcEEEEEEEEeCCc----eEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEeceeec
Q 003963 499 DYEILWEDLTIGEQIGQGSCGTVYHAVWYGSQ----DVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTS 574 (783)
Q Consensus 499 ~~e~~~~~y~i~~~LG~G~fG~Vy~a~~~~~~----~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~ 574 (783)
...+..++|++.+.||+|+||.||+|.+.... .||||++..........+.+.+|+.+++.++||||+++++++..
T Consensus 17 ~~~i~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~ 96 (323)
T 3qup_A 17 DVLIPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLR 96 (323)
T ss_dssp TTBCC---CEEEEEEEEETTEEEEEEEC-------CEEEEEEC------CHHHHHHHHHHHHHTTCCCTTBCCCCEEEEC
T ss_pred hcccChhHeEEeceecccCCeEEEEEEEcccCCcceeEEEEEecccccCHHHHHHHHHHHHHHHHCCCCceehhhceeec
Confidence 34566789999999999999999999876543 69999998765555667889999999999999999999999987
Q ss_pred CCce------EEEEEecCCCCHHHHHhhcC-----CcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCC
Q 003963 575 PQRL------CIVTEFLPRGSLFRLLQRNT-----TKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHW 643 (783)
Q Consensus 575 ~~~~------~lV~E~~~ggsL~~~L~~~~-----~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~ 643 (783)
.... ++||||+.+++|.+++.... ..+++..++.++.||+.||.|||+++ |+||||||+||||+.++
T Consensus 97 ~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~--ivH~Dikp~NIli~~~~ 174 (323)
T 3qup_A 97 SRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSRN--FIHRDLAARNCMLAEDM 174 (323)
T ss_dssp C-------CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCSGGGEEECTTS
T ss_pred cccccCCCccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHHcCC--cccCCCCcceEEEcCCC
Confidence 6654 99999999999999996432 25899999999999999999999998 99999999999999999
Q ss_pred cEEEEecCCCccccccc--ccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCChHHHHHHhhc
Q 003963 644 TVKVGDFGLSRLKHETY--LTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELAT-EKIPWDNLNSMQVIGAVGF 720 (783)
Q Consensus 644 ~vkL~DFGla~~~~~~~--~~~~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~ellt-G~~Pf~~~~~~~~~~~i~~ 720 (783)
.+||+|||+++...... .......+++.|+|||++.+..++.++|||||||++|+|++ |..||...........+.
T Consensus 175 ~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~~~~~- 253 (323)
T 3qup_A 175 TVCVADFGLSRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENAEIYNYLI- 253 (323)
T ss_dssp CEEECCCCC-----------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHH-
T ss_pred CEEEeeccccccccccccccccccccCcccccCchhhcCCCCCCccchhhHHHHHHHHHhCCCCCccccChHHHHHHHh-
Confidence 99999999997654332 12223456789999999999999999999999999999999 999999888777665553
Q ss_pred ccccccCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHH
Q 003963 721 MNQRLEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQY 767 (783)
Q Consensus 721 ~~~~~~~~~~~s~~l~~LI~~cL~~dP~~RPsa~ell~~L~~L~~~~ 767 (783)
.......+..+++++.+||.+||..||.+|||+.++++.|+++....
T Consensus 254 ~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~l~~~ 300 (323)
T 3qup_A 254 GGNRLKQPPECMEEVYDLMYQCWSADPKQRPSFTCLRMELENILGHL 300 (323)
T ss_dssp TTCCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHC-
T ss_pred cCCCCCCCCccCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHh
Confidence 23355667889999999999999999999999999999999885443
No 84
>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}
Probab=100.00 E-value=3.1e-42 Score=381.20 Aligned_cols=263 Identities=26% Similarity=0.467 Sum_probs=225.2
Q ss_pred cccccceeEeeeeccCCcEEEEEEEEe------CCceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEeceeec
Q 003963 501 EILWEDLTIGEQIGQGSCGTVYHAVWY------GSQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTS 574 (783)
Q Consensus 501 e~~~~~y~i~~~LG~G~fG~Vy~a~~~------~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~ 574 (783)
++..++|+++++||+|+||.||+|.+. .++.||||++.... .......+.+|+.+++.++|||||++++++..
T Consensus 67 ~~~~~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~ 145 (367)
T 3l9p_A 67 EVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVC-SEQDELDFLMEALIISKFNHQNIVRCIGVSLQ 145 (367)
T ss_dssp BCCGGGEEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSC-CHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred hcCHhHeEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEeccccc-ChhhHHHHHHHHHHHHhCCCCCCCeEEEEEec
Confidence 456789999999999999999999853 23569999986543 44455678899999999999999999999999
Q ss_pred CCceEEEEEecCCCCHHHHHhhcC------CcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCC---cE
Q 003963 575 PQRLCIVTEFLPRGSLFRLLQRNT------TKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHW---TV 645 (783)
Q Consensus 575 ~~~~~lV~E~~~ggsL~~~L~~~~------~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~---~v 645 (783)
....++|||||++|+|.+++.... ..+++..++.++.||+.||+|||+++ |+||||||+||||+.++ .+
T Consensus 146 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~--ivHrDlkp~NIll~~~~~~~~~ 223 (367)
T 3l9p_A 146 SLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH--FIHRDIAARNCLLTCPGPGRVA 223 (367)
T ss_dssp SSSCEEEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCCGGGEEESCSSTTCCE
T ss_pred CCCCEEEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHHhCC--eeCCCCChhhEEEecCCCCceE
Confidence 999999999999999999997643 35889999999999999999999999 99999999999998554 59
Q ss_pred EEEecCCCcccccc--cccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCChHHHHHHhhccc
Q 003963 646 KVGDFGLSRLKHET--YLTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELAT-EKIPWDNLNSMQVIGAVGFMN 722 (783)
Q Consensus 646 kL~DFGla~~~~~~--~~~~~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~ellt-G~~Pf~~~~~~~~~~~i~~~~ 722 (783)
||+|||+++..... ........||+.|+|||++.+..++.++|||||||++|+|++ |..||...........+. ..
T Consensus 224 kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~pf~~~~~~~~~~~i~-~~ 302 (367)
T 3l9p_A 224 KIGDFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVT-SG 302 (367)
T ss_dssp EECCCHHHHHHHHHSSCTTCCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHH-TT
T ss_pred EECCCccccccccccccccCCCcCCcccEECHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHH-cC
Confidence 99999998754322 122234467899999999999999999999999999999998 999999988877776654 33
Q ss_pred ccccCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHH
Q 003963 723 QRLEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQY 767 (783)
Q Consensus 723 ~~~~~~~~~s~~l~~LI~~cL~~dP~~RPsa~ell~~L~~L~~~~ 767 (783)
.....+..+++.+.+||.+||+.||.+||++.++++.|+.+....
T Consensus 303 ~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~eil~~l~~~~~~~ 347 (367)
T 3l9p_A 303 GRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQDP 347 (367)
T ss_dssp CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHCH
T ss_pred CCCCCCccCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhhCh
Confidence 355667889999999999999999999999999999999886654
No 85
>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=2e-41 Score=360.55 Aligned_cols=267 Identities=25% Similarity=0.473 Sum_probs=229.1
Q ss_pred cccccceeEee-eeccCCcEEEEEEEEe---CCceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEeceeecCC
Q 003963 501 EILWEDLTIGE-QIGQGSCGTVYHAVWY---GSQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQ 576 (783)
Q Consensus 501 e~~~~~y~i~~-~LG~G~fG~Vy~a~~~---~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~ 576 (783)
.+..++|.+.+ .||+|+||.||+|.+. .+..||||++.... .....+.+.+|+.+++.++||||+++++++. .+
T Consensus 5 ~~~~~~~~i~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~ 82 (287)
T 1u59_A 5 FLKRDNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGT-EKADTEEMMREAQIMHQLDNPYIVRLIGVCQ-AE 82 (287)
T ss_dssp BCCGGGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSC-CHHHHHHHHHHHHHHHHCCCTTBCCEEEEEE-SS
T ss_pred cccHHHhhhhhccccccCceeEEEeEeccCCCcceEEEEecCCcc-chhHHHHHHHHHHHHHhCCCCCEeEEEEEec-CC
Confidence 44567888887 9999999999999864 45679999997653 4556678999999999999999999999994 56
Q ss_pred ceEEEEEecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCccc
Q 003963 577 RLCIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLK 656 (783)
Q Consensus 577 ~~~lV~E~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~ 656 (783)
..++||||+++++|.+++......+++..++.++.||+.||.|||+++ |+||||||+|||++.++.+||+|||++...
T Consensus 83 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~--i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~ 160 (287)
T 1u59_A 83 ALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKN--FVHRDLAARNVLLVNRHYAKISDFGLSKAL 160 (287)
T ss_dssp SEEEEEECCTTEEHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHHHTT--EECCCCSGGGEEEEETTEEEECCCTTCEEC
T ss_pred CcEEEEEeCCCCCHHHHHHhCCccCCHHHHHHHHHHHHHHHHHHHHCC--EeeCCCchheEEEcCCCCEEECcccceeee
Confidence 799999999999999999876677999999999999999999999998 999999999999999999999999999865
Q ss_pred ccccc---cccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCChHHHHHHhhcccccccCCCCCC
Q 003963 657 HETYL---TTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELAT-EKIPWDNLNSMQVIGAVGFMNQRLEIPKDVD 732 (783)
Q Consensus 657 ~~~~~---~~~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s 732 (783)
..... ......+|+.|+|||++.+..++.++|||||||++|+|++ |..||......+....+.. .....++..++
T Consensus 161 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~i~~-~~~~~~~~~~~ 239 (287)
T 1u59_A 161 GADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQ-GKRMECPPECP 239 (287)
T ss_dssp TTCSCEECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTHHHHHHHHT-TCCCCCCTTCC
T ss_pred ccCcceeeccccccccccccCHHHhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCHHHHHHHHhc-CCcCCCCCCcC
Confidence 43221 1223456899999999998889999999999999999998 9999998887776655532 34566778899
Q ss_pred HHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhcCc
Q 003963 733 PRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQASR 772 (783)
Q Consensus 733 ~~l~~LI~~cL~~dP~~RPsa~ell~~L~~L~~~~f~~~~ 772 (783)
+++.+||..||..||.+||++.++++.|+.+....-....
T Consensus 240 ~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~~~~~~ 279 (287)
T 1u59_A 240 PELYALMSDCWIYKWEDRPDFLTVEQRMRACYYSLASKVE 279 (287)
T ss_dssp HHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHHHHTTCS
T ss_pred HHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhcCCccc
Confidence 9999999999999999999999999999988877654443
No 86
>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=4.7e-42 Score=374.75 Aligned_cols=268 Identities=26% Similarity=0.339 Sum_probs=220.3
Q ss_pred cccccceeEeeeeccCCcEEEEEEEEeC-CceEEEEEEecccC---CHHHHHHHHHHHHHHHhCCCCceeeEeceeecCC
Q 003963 501 EILWEDLTIGEQIGQGSCGTVYHAVWYG-SQDVAVKVFSRQEY---SDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQ 576 (783)
Q Consensus 501 e~~~~~y~i~~~LG~G~fG~Vy~a~~~~-~~~vAiK~i~~~~~---~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~ 576 (783)
....++|++.+.||+|+||.||+|.+.. ++.||||++..... .......+.+|+.+++.++||||+++++++...+
T Consensus 22 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~ 101 (345)
T 3hko_A 22 LELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYEDEQ 101 (345)
T ss_dssp HHHHHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEEECSS
T ss_pred hhhhhheeecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhhccCC
Confidence 3456899999999999999999999865 46799999976431 2344578899999999999999999999999999
Q ss_pred ceEEEEEecCCCCHHHHHhhc---------------------------------------CCcchHHHHHHHHHHHHHHH
Q 003963 577 RLCIVTEFLPRGSLFRLLQRN---------------------------------------TTKLDWRRRILMALDIARGV 617 (783)
Q Consensus 577 ~~~lV~E~~~ggsL~~~L~~~---------------------------------------~~~l~~~~~~~i~~qi~~aL 617 (783)
..++|||||++++|.+++... ...+++..++.++.||+.||
T Consensus 102 ~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l 181 (345)
T 3hko_A 102 YICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSAL 181 (345)
T ss_dssp EEEEEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHHHHHHHH
T ss_pred eEEEEEeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHH
Confidence 999999999999999998521 22357888899999999999
Q ss_pred HHHHhCCCCEEecCCCCCCEEEcCCC--cEEEEecCCCccccccc----ccccCCCCCCcccCcccccC--CCCCchhHH
Q 003963 618 SYLHHCNPPIIHRDLKSSNLLVDKHW--TVKVGDFGLSRLKHETY----LTTKTGKGTPQWMAPEVLRN--EPSDEKSDV 689 (783)
Q Consensus 618 ~~LH~~~~~IvHrDIKp~NILl~~~~--~vkL~DFGla~~~~~~~----~~~~~~~Gt~~Y~aPE~~~~--~~~s~~sDI 689 (783)
+|||+++ |+||||||+||||+.++ .+||+|||++....... .......||+.|+|||++.+ ..++.++||
T Consensus 182 ~~LH~~~--ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~Di 259 (345)
T 3hko_A 182 HYLHNQG--ICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCDA 259 (345)
T ss_dssp HHHHHTT--EECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC--------CCCGGGCCHHHHTCSSSCCCTHHHH
T ss_pred HHHHHCC--ccccCCChhhEEEecCCCceEEEeeccccccccccCccccccccccCCCccccCchhhccCCCCCCcHHHH
Confidence 9999998 99999999999998766 89999999997653321 12235579999999999975 678899999
Q ss_pred HHHHHHHHHHHcCCCCCCCCChHHHHHHhhcccccccC--CCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHH
Q 003963 690 YSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLEI--PKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQY 767 (783)
Q Consensus 690 wSLG~il~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~--~~~~s~~l~~LI~~cL~~dP~~RPsa~ell~~L~~L~~~~ 767 (783)
|||||++|+|++|..||...........+......... ...+++.+.+||.+||..||.+||++.++ |+|+|
T Consensus 260 wslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~------l~hp~ 333 (345)
T 3hko_A 260 WSAGVLLHLLLMGAVPFPGVNDADTISQVLNKKLCFENPNYNVLSPLARDLLSNLLNRNVDERFDAMRA------LQHPW 333 (345)
T ss_dssp HHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCTTSGGGGGSCHHHHHHHHHHSCSCTTTSCCHHHH------HHSHH
T ss_pred HHHHHHHHHHHHCCCCCCCCChHHHHHHHHhcccccCCcccccCCHHHHHHHHHHcCCChhHCCCHHHH------hcChh
Confidence 99999999999999999988887776665433322222 23488999999999999999999999999 78999
Q ss_pred hhcCcCCCC
Q 003963 768 FQASRSTVG 776 (783)
Q Consensus 768 f~~~~~~~~ 776 (783)
|+.....+.
T Consensus 334 ~~~~~~~~~ 342 (345)
T 3hko_A 334 ISQFSDKIY 342 (345)
T ss_dssp HHTTSSCSS
T ss_pred hccChHhhE
Confidence 998776543
No 87
>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7
Probab=100.00 E-value=5.7e-42 Score=381.80 Aligned_cols=261 Identities=21% Similarity=0.375 Sum_probs=224.6
Q ss_pred cccceeEeeeeccCCcEEEEEEEEeC-CceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEeceeecCCceEEE
Q 003963 503 LWEDLTIGEQIGQGSCGTVYHAVWYG-SQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIV 581 (783)
Q Consensus 503 ~~~~y~i~~~LG~G~fG~Vy~a~~~~-~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lV 581 (783)
..++|++.++||+|+||.||+|.+.. ++.||+|++.... ......+.+|+.+|+.++|||||++++++.....+++|
T Consensus 49 ~~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~--~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv 126 (387)
T 1kob_A 49 VYDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPY--PLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLI 126 (387)
T ss_dssp GGGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS--HHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEE
T ss_pred cccceEEEEEEecCCCEEEEEEEECCCCCEEEEEEecccc--hhhHHHHHHHHHHHHhCCCcCCCeEEEEEEeCCEEEEE
Confidence 45789999999999999999999864 5679999987543 23345788999999999999999999999999999999
Q ss_pred EEecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcC--CCcEEEEecCCCcccccc
Q 003963 582 TEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDK--HWTVKVGDFGLSRLKHET 659 (783)
Q Consensus 582 ~E~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~--~~~vkL~DFGla~~~~~~ 659 (783)
||||++++|.+++......+++..++.++.||+.||.|||+++ |+||||||+|||++. .+.+||+|||++......
T Consensus 127 ~E~~~gg~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~g--ivHrDlkp~NIll~~~~~~~vkL~DFG~a~~~~~~ 204 (387)
T 1kob_A 127 LEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHEHS--IVHLDIKPENIMCETKKASSVKIIDFGLATKLNPD 204 (387)
T ss_dssp EECCCCCBHHHHTTCTTCCBCHHHHHHHHHHHHHHHHHHHHTT--EECCCCCGGGEEESSTTCCCEEECCCTTCEECCTT
T ss_pred EEcCCCCcHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCC--eeecccchHHeEEecCCCCceEEEecccceecCCC
Confidence 9999999999999876667999999999999999999999998 999999999999974 578999999999866543
Q ss_pred cccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhcccc--cccCCCCCCHHHHH
Q 003963 660 YLTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQ--RLEIPKDVDPRWAA 737 (783)
Q Consensus 660 ~~~~~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~elltG~~Pf~~~~~~~~~~~i~~~~~--~~~~~~~~s~~l~~ 737 (783)
.. .....||+.|+|||++.+..++.++|||||||++|+|++|..||...+....+..+..... ....+..+++++.+
T Consensus 205 ~~-~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~ 283 (387)
T 1kob_A 205 EI-VKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRCDWEFDEDAFSSVSPEAKD 283 (387)
T ss_dssp SC-EEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHHCCCCCCSSTTTTSCHHHHH
T ss_pred cc-eeeeccCCCccCchhccCCCCCCcccEeeHhHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCccccccCCHHHHH
Confidence 22 2234789999999999999999999999999999999999999998887776666543322 22334578999999
Q ss_pred HHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhcCcCC
Q 003963 738 IVESCWHSDPQCRPSFQELVDKLRDLQRQYFQASRST 774 (783)
Q Consensus 738 LI~~cL~~dP~~RPsa~ell~~L~~L~~~~f~~~~~~ 774 (783)
||.+||..||.+|||+.++ |+|+||+...+.
T Consensus 284 li~~~L~~dP~~Rpt~~el------l~hp~~~~~~~~ 314 (387)
T 1kob_A 284 FIKNLLQKEPRKRLTVHDA------LEHPWLKGDHSN 314 (387)
T ss_dssp HHHTTSCSSGGGSCCHHHH------HTSTTTSSCCTT
T ss_pred HHHHHcCCChhHCcCHHHH------hhCccccCCccc
Confidence 9999999999999999999 678999765543
No 88
>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}
Probab=100.00 E-value=6.7e-42 Score=366.38 Aligned_cols=260 Identities=25% Similarity=0.389 Sum_probs=217.0
Q ss_pred cccccceeEeeeeccCCcEEEEEEEEeC-CceEEEEEEecccC-CHHHHHHHHHHHHHHHhCCCCceeeEeceeecCCce
Q 003963 501 EILWEDLTIGEQIGQGSCGTVYHAVWYG-SQDVAVKVFSRQEY-SDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRL 578 (783)
Q Consensus 501 e~~~~~y~i~~~LG~G~fG~Vy~a~~~~-~~~vAiK~i~~~~~-~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~ 578 (783)
+...++|++.+.||+|+||.||+|.+.. ++.||+|++..... .....+.+.+|+.+++.++||||+++++++...+.+
T Consensus 7 ~~~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~ 86 (294)
T 4eqm_A 7 KIINERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDCY 86 (294)
T ss_dssp SCEETTEEEEEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEEECSSEE
T ss_pred hHhhccEEEEEEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCceEEEeeeeCCeE
Confidence 3456899999999999999999999864 56899999866543 446677899999999999999999999999999999
Q ss_pred EEEEEecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCccccc
Q 003963 579 CIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHE 658 (783)
Q Consensus 579 ~lV~E~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~~ 658 (783)
|+||||+++++|.+++... .++++..++.++.||+.||+|||+++ |+||||||+|||++.++.+||+|||++.....
T Consensus 87 ~lv~e~~~g~~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~--i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 163 (294)
T 4eqm_A 87 YLVMEYIEGPTLSEYIESH-GPLSVDTAINFTNQILDGIKHAHDMR--IVHRDIKPQNILIDSNKTLKIFDFGIAKALSE 163 (294)
T ss_dssp EEEEECCCSCBHHHHHHHH-CSCCHHHHHHHHHHHHHHHHHHHHTT--CCCCCCCGGGEEECTTSCEEECCCSSSTTC--
T ss_pred EEEEeCCCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCC--cccCCCCHHHEEECCCCCEEEEeCCCcccccc
Confidence 9999999999999999764 36899999999999999999999998 99999999999999999999999999986544
Q ss_pred cc-ccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccc---ccccCCCCCCHH
Q 003963 659 TY-LTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMN---QRLEIPKDVDPR 734 (783)
Q Consensus 659 ~~-~~~~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~elltG~~Pf~~~~~~~~~~~i~~~~---~~~~~~~~~s~~ 734 (783)
.. .......||+.|+|||++.+..++.++|||||||++|+|++|+.||...+............ .....+..+++.
T Consensus 164 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (294)
T 4eqm_A 164 TSLTQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGETAVSIAIKHIQDSVPNVTTDVRKDIPQS 243 (294)
T ss_dssp -----------CCSSCCHHHHHTCCCCTTHHHHHHHHHHHHHHHSSCSSCSSCHHHHHHHHHSSCCCCHHHHSCTTSCHH
T ss_pred ccccccCccccCccccCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhhccCCCcchhcccCCCHH
Confidence 32 22234568999999999999999999999999999999999999999887765443322111 112356778999
Q ss_pred HHHHHHHhhhhCCCCCC-CHHHHHHHHHHH
Q 003963 735 WAAIVESCWHSDPQCRP-SFQELVDKLRDL 763 (783)
Q Consensus 735 l~~LI~~cL~~dP~~RP-sa~ell~~L~~L 763 (783)
+.++|.+||.+||.+|| ++.++++.|..+
T Consensus 244 l~~li~~~l~~dp~~R~~~~~~l~~~l~~~ 273 (294)
T 4eqm_A 244 LSNVILRATEKDKANRYKTIQEMKDDLSSV 273 (294)
T ss_dssp HHHHHHHHSCSSGGGSCSSHHHHHHHHHTS
T ss_pred HHHHHHHHhcCCHhHccccHHHHHHHHHHH
Confidence 99999999999999998 888887776654
No 89
>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}
Probab=100.00 E-value=8.2e-42 Score=378.73 Aligned_cols=255 Identities=24% Similarity=0.349 Sum_probs=213.4
Q ss_pred ceeE--eeeeccCCcEEEEEEEEeC-CceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEeceeecCCceEEEE
Q 003963 506 DLTI--GEQIGQGSCGTVYHAVWYG-SQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIVT 582 (783)
Q Consensus 506 ~y~i--~~~LG~G~fG~Vy~a~~~~-~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lV~ 582 (783)
.|.+ .+.||+|+||.||+|.+.. ++.||+|++.... ......+.+|+.+++.++|||||++++++...+.+++||
T Consensus 88 ~~~~~~~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~ 165 (373)
T 2x4f_A 88 FYTVSKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRG--MKDKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVM 165 (373)
T ss_dssp TEEEEEEEECC-----CEEEEEETTTCCEEEEEEEECCS--HHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred ceeeecceEEecCcCEEEEEEEEcCCCcEEEEEEEcccc--cccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEE
Confidence 3444 6789999999999999854 5789999997654 234567899999999999999999999999999999999
Q ss_pred EecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEE--cCCCcEEEEecCCCccccccc
Q 003963 583 EFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLV--DKHWTVKVGDFGLSRLKHETY 660 (783)
Q Consensus 583 E~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl--~~~~~vkL~DFGla~~~~~~~ 660 (783)
|||++++|.+++......+++..++.++.||+.||.|||+++ |+||||||+|||| +.++.+||+|||++.......
T Consensus 166 E~~~~~~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~--ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~~~~~~ 243 (373)
T 2x4f_A 166 EYVDGGELFDRIIDESYNLTELDTILFMKQICEGIRHMHQMY--ILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPRE 243 (373)
T ss_dssp ECCTTCEEHHHHHHTGGGCCHHHHHHHHHHHHHHHHHHHHTT--EECCCCCGGGEEEEETTTTEEEECCCSSCEECCTTC
T ss_pred eCCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC--cccccCCHHHEEEecCCCCcEEEEeCCCceecCCcc
Confidence 999999999999876667999999999999999999999998 9999999999999 567899999999998665432
Q ss_pred ccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccccc--ccCCCCCCHHHHHH
Q 003963 661 LTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQR--LEIPKDVDPRWAAI 738 (783)
Q Consensus 661 ~~~~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~elltG~~Pf~~~~~~~~~~~i~~~~~~--~~~~~~~s~~l~~L 738 (783)
.....+||+.|+|||++.+..++.++|||||||++|+|++|..||...+....+..+...... ......+++++.+|
T Consensus 244 -~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l 322 (373)
T 2x4f_A 244 -KLKVNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDAETLNNILACRWDLEDEEFQDISEEAKEF 322 (373)
T ss_dssp -BCCCCCSSCTTCCHHHHTTCBCCHHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTCCCSCSGGGTTSCHHHHHH
T ss_pred -ccccccCCCcEeChhhccCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCCCChhhhccCCHHHHHH
Confidence 233457999999999999999999999999999999999999999988887766665433221 12235689999999
Q ss_pred HHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhcC
Q 003963 739 VESCWHSDPQCRPSFQELVDKLRDLQRQYFQAS 771 (783)
Q Consensus 739 I~~cL~~dP~~RPsa~ell~~L~~L~~~~f~~~ 771 (783)
|.+||..||.+||++.++ |+|+||+..
T Consensus 323 i~~~L~~dp~~Rps~~e~------l~hp~~~~~ 349 (373)
T 2x4f_A 323 ISKLLIKEKSWRISASEA------LKHPWLSDH 349 (373)
T ss_dssp HHTTSCSSGGGSCCHHHH------HHSHHHHCH
T ss_pred HHHHcCCChhhCCCHHHH------hcCcCcCCC
Confidence 999999999999999999 678888543
No 90
>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A
Probab=100.00 E-value=5.7e-42 Score=378.25 Aligned_cols=256 Identities=27% Similarity=0.410 Sum_probs=205.2
Q ss_pred cccceeEeeeeccCCcEEEEEEEEeC-CceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEeceeecCCceEEE
Q 003963 503 LWEDLTIGEQIGQGSCGTVYHAVWYG-SQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIV 581 (783)
Q Consensus 503 ~~~~y~i~~~LG~G~fG~Vy~a~~~~-~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lV 581 (783)
..++|++.++||+|+||.||++.+.. ++.||||++....... ..+.+|+.+++.++|||||++++++.....+|+|
T Consensus 18 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~---~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv 94 (361)
T 3uc3_A 18 DSDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAAID---ENVQREIINHRSLRHPNIVRFKEVILTPTHLAII 94 (361)
T ss_dssp CTTTEEEEEEESSSTTSSEEEEEETTTCCEEEEEEEESSTTSC---HHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred CCCcEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEecCcccc---HHHHHHHHHHHhCCCCCCCcEEEEEeeCCEEEEE
Confidence 35789999999999999999999864 5679999997654333 4577899999999999999999999999999999
Q ss_pred EEecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCc--EEEEecCCCcccccc
Q 003963 582 TEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWT--VKVGDFGLSRLKHET 659 (783)
Q Consensus 582 ~E~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~--vkL~DFGla~~~~~~ 659 (783)
||||++++|.+++... ..+++..++.++.||+.||+|||++| |+||||||+||||+.++. +||+|||+++.....
T Consensus 95 ~e~~~~~~L~~~l~~~-~~~~~~~~~~i~~ql~~~L~~LH~~~--ivH~Dlkp~Nill~~~~~~~~kl~Dfg~a~~~~~~ 171 (361)
T 3uc3_A 95 MEYASGGELYERICNA-GRFSEDEARFFFQQLLSGVSYCHSMQ--ICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLH 171 (361)
T ss_dssp EECCCSCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHHTT--CCSCCCCGGGEEECSSSSCCEEECCCCCC------
T ss_pred EEeCCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCC--cccCCCCHHHEEEcCCCCceEEEeecCcccccccc
Confidence 9999999999999764 35999999999999999999999999 999999999999987665 999999998743322
Q ss_pred cccccCCCCCCcccCcccccCCCCCch-hHHHHHHHHHHHHHcCCCCCCCCCh----HHHHHHhhcccccccCCCCCCHH
Q 003963 660 YLTTKTGKGTPQWMAPEVLRNEPSDEK-SDVYSFGVILWELATEKIPWDNLNS----MQVIGAVGFMNQRLEIPKDVDPR 734 (783)
Q Consensus 660 ~~~~~~~~Gt~~Y~aPE~~~~~~~s~~-sDIwSLG~il~elltG~~Pf~~~~~----~~~~~~i~~~~~~~~~~~~~s~~ 734 (783)
. .....+||+.|+|||++.+..++.+ +|||||||++|+|++|++||..... ......+.......+....++++
T Consensus 172 ~-~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~ 250 (361)
T 3uc3_A 172 S-QPKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRDYRKTIQRILSVKYSIPDDIRISPE 250 (361)
T ss_dssp ----------CTTSCHHHHHCSSCCHHHHHHHHHHHHHHHHHHSSCSCC----CCCHHHHHHHHHTTCCCCCTTSCCCHH
T ss_pred C-CCCCCcCCCCcCChhhhcCCCCCCCeeeeehhHHHHHHHHhCCCCCCCCccHHHHHHHHHHHhcCCCCCCCcCCCCHH
Confidence 2 2334579999999999988887655 8999999999999999999976543 23333332222233334468999
Q ss_pred HHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhcC
Q 003963 735 WAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQAS 771 (783)
Q Consensus 735 l~~LI~~cL~~dP~~RPsa~ell~~L~~L~~~~f~~~ 771 (783)
+.+||.+||..||.+|||+.++ ++|+||+..
T Consensus 251 ~~~li~~~L~~dP~~Rps~~el------l~hp~f~~~ 281 (361)
T 3uc3_A 251 CCHLISRIFVADPATRISIPEI------KTHSWFLKN 281 (361)
T ss_dssp HHHHHHHHSCSCTTTSCCHHHH------HTSHHHHTT
T ss_pred HHHHHHHHccCChhHCcCHHHH------HhCcchhcC
Confidence 9999999999999999999999 778999654
No 91
>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...
Probab=100.00 E-value=3.6e-42 Score=372.03 Aligned_cols=272 Identities=32% Similarity=0.542 Sum_probs=233.5
Q ss_pred cccccccceeEeeeeccCCcEEEEEEEEeC------CceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEecee
Q 003963 499 DYEILWEDLTIGEQIGQGSCGTVYHAVWYG------SQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAV 572 (783)
Q Consensus 499 ~~e~~~~~y~i~~~LG~G~fG~Vy~a~~~~------~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~ 572 (783)
.+++..++|++.+.||+|+||.||+|.+.. ++.||||++.... .......+.+|+.+++.++||||+++++++
T Consensus 19 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~ 97 (322)
T 1p4o_A 19 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAA-SMRERIEFLNEASVMKEFNCHHVVRLLGVV 97 (322)
T ss_dssp TTBCCGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTS-CHHHHHHHHHHHHHGGGCCCTTBCCEEEEE
T ss_pred hhcchhhheeeeeEeccCCceEEEeeeecCccCCCCceEEEEEeccccc-CHHHHHHHHHHHHHHHhcCCCCEeeeEEEE
Confidence 456777899999999999999999998752 4579999987543 344556788999999999999999999999
Q ss_pred ecCCceEEEEEecCCCCHHHHHhhcC---------CcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCC
Q 003963 573 TSPQRLCIVTEFLPRGSLFRLLQRNT---------TKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHW 643 (783)
Q Consensus 573 ~~~~~~~lV~E~~~ggsL~~~L~~~~---------~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~ 643 (783)
...+..++||||+++++|.+++.... ..+++..++.++.||+.||.|||+++ |+||||||+||||+.++
T Consensus 98 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~--i~H~dikp~NIli~~~~ 175 (322)
T 1p4o_A 98 SQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANK--FVHRDLAARNCMVAEDF 175 (322)
T ss_dssp CSSSSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHTT--CBCSCCSGGGEEECTTC
T ss_pred ccCCccEEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHHCC--CccCCCccceEEEcCCC
Confidence 99999999999999999999997532 34688999999999999999999998 99999999999999999
Q ss_pred cEEEEecCCCccccccc--ccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCChHHHHHHhhc
Q 003963 644 TVKVGDFGLSRLKHETY--LTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELAT-EKIPWDNLNSMQVIGAVGF 720 (783)
Q Consensus 644 ~vkL~DFGla~~~~~~~--~~~~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~ellt-G~~Pf~~~~~~~~~~~i~~ 720 (783)
.+||+|||++....... .......+|+.|+|||++.+..++.++|||||||++|+|++ |..||...+.......+..
T Consensus 176 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~ 255 (322)
T 1p4o_A 176 TVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVME 255 (322)
T ss_dssp CEEECCTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCHHHHHHHHHT
T ss_pred eEEECcCccccccccccccccccCCCCCCCccChhhhccCCCCchhhHHHHHHHHHHHHhcCCCccccCCHHHHHHHHHc
Confidence 99999999997654332 22234457889999999999999999999999999999999 8999998887776665532
Q ss_pred ccccccCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhcCcCC
Q 003963 721 MNQRLEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQASRST 774 (783)
Q Consensus 721 ~~~~~~~~~~~s~~l~~LI~~cL~~dP~~RPsa~ell~~L~~L~~~~f~~~~~~ 774 (783)
......+..+++.+.+||.+||..||.+|||+.++++.|+++..++|+.....
T Consensus 256 -~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~~L~~~~~~~~~~~~~~ 308 (322)
T 1p4o_A 256 -GGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEMEPGFREVSFY 308 (322)
T ss_dssp -TCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHGGGSCTTHHHHCST
T ss_pred -CCcCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHhhccCCcccccc
Confidence 33455677899999999999999999999999999999999888888665543
No 92
>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}
Probab=100.00 E-value=1.2e-42 Score=377.40 Aligned_cols=261 Identities=23% Similarity=0.340 Sum_probs=211.7
Q ss_pred cceeEeeeeccCCcEEEEEEEEe-CCceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEeceeecCCceEEEEE
Q 003963 505 EDLTIGEQIGQGSCGTVYHAVWY-GSQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIVTE 583 (783)
Q Consensus 505 ~~y~i~~~LG~G~fG~Vy~a~~~-~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lV~E 583 (783)
++|+++++||+|+||.||+|.+. .++.||||++...... .....+.+|+.+++.++||||+++++++...+.+++|||
T Consensus 2 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 80 (324)
T 3mtl_A 2 ETYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEE-GAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFE 80 (324)
T ss_dssp CSEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECC-------CCCCCCCHHHHSCCCCTTBCCEEEEEECSSCEEEEEE
T ss_pred CceEEEEEEcCCCCEEEEEEEECCCCcEEEEEEEeccccc-ccchhHHHHHHHHHhcCCCCCCeeeeEEeeCCEEEEEec
Confidence 68999999999999999999986 4567999998654321 112234579999999999999999999999999999999
Q ss_pred ecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCcccccccccc
Q 003963 584 FLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETYLTT 663 (783)
Q Consensus 584 ~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~~~~ 663 (783)
|++ ++|.+++......+++..++.++.||+.||.|||++| |+||||||+|||++.++.+||+|||++..........
T Consensus 81 ~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~--ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~~~~ 157 (324)
T 3mtl_A 81 YLD-KDLKQYLDDCGNIINMHNVKLFLFQLLRGLAYCHRQK--VLHRDLKPQNLLINERGELKLADFGLARAKSIPTKTY 157 (324)
T ss_dssp CCS-EEHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTT--EEESSCCGGGEEECTTCCEEECSSSEEECC-------
T ss_pred ccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC--ccCCCcCHHHEEECCCCCEEEccCcccccccCCcccc
Confidence 996 5999999887777999999999999999999999998 9999999999999999999999999987655444444
Q ss_pred cCCCCCCcccCcccccC-CCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccccc------------------
Q 003963 664 KTGKGTPQWMAPEVLRN-EPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQR------------------ 724 (783)
Q Consensus 664 ~~~~Gt~~Y~aPE~~~~-~~~s~~sDIwSLG~il~elltG~~Pf~~~~~~~~~~~i~~~~~~------------------ 724 (783)
....||+.|+|||++.+ ..++.++|||||||++|+|++|+.||...+.......+......
T Consensus 158 ~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 237 (324)
T 3mtl_A 158 DNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEEFKTY 237 (324)
T ss_dssp -----CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGCHHHHHT
T ss_pred ccccCcccccChhhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHhchhhhcchhhccc
Confidence 45678999999999887 56899999999999999999999999988877655544221111
Q ss_pred ----------ccCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhcCcCCC
Q 003963 725 ----------LEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQASRSTV 775 (783)
Q Consensus 725 ----------~~~~~~~s~~l~~LI~~cL~~dP~~RPsa~ell~~L~~L~~~~f~~~~~~~ 775 (783)
......+++++.+||.+||+.||.+|||+.++ |+|+||+......
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~------l~hp~f~~~~~~~ 292 (324)
T 3mtl_A 238 NYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDA------MKHPFFLSLGERI 292 (324)
T ss_dssp CCCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSGGGSCCHHHH------TTSGGGGGGCSTT
T ss_pred ccccccchhhhhhcCCCCHHHHHHHHHHcCcCcccCCCHHHH------hcChhhhhccccc
Confidence 01123578899999999999999999999999 7899998776543
No 93
>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}
Probab=100.00 E-value=5.7e-42 Score=369.91 Aligned_cols=255 Identities=20% Similarity=0.217 Sum_probs=210.8
Q ss_pred ccccceeEeeeeccCCcEEEEEEEEe-CCceEEEEEEecccCCHHHHHHHHHHHHHHHhC-CCCceeeEeceeecCCceE
Q 003963 502 ILWEDLTIGEQIGQGSCGTVYHAVWY-GSQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRL-RHPNVLLFMGAVTSPQRLC 579 (783)
Q Consensus 502 ~~~~~y~i~~~LG~G~fG~Vy~a~~~-~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l-~HpnIv~l~~~~~~~~~~~ 579 (783)
...++|++.++||+|+||.||+|.+. .++.||||++............+..|+..+..+ +||||+++++++...+.+|
T Consensus 54 ~~~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~~~~~~ 133 (311)
T 3p1a_A 54 FFQQSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGGILY 133 (311)
T ss_dssp HHHHHEEEEEEEEEETTEEEEEEEETTTSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEE
T ss_pred hhhhheeeeheeccCCCeEEEEEEECCCCeEEEEEEecccccChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEeCCEEE
Confidence 34578999999999999999999987 467899999876655554445555666655555 8999999999999999999
Q ss_pred EEEEecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCcccccc
Q 003963 580 IVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHET 659 (783)
Q Consensus 580 lV~E~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~~~ 659 (783)
+||||+ +++|.+++......+++..++.++.||+.||+|||+.+ |+||||||+||||+.++.+||+|||++......
T Consensus 134 lv~e~~-~~~L~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~--ivH~Dikp~NIll~~~~~~kl~DFG~a~~~~~~ 210 (311)
T 3p1a_A 134 LQTELC-GPSLQQHCEAWGASLPEAQVWGYLRDTLLALAHLHSQG--LVHLDVKPANIFLGPRGRCKLGDFGLLVELGTA 210 (311)
T ss_dssp EEEECC-CCBHHHHHHHHCSCCCHHHHHHHHHHHHHHHHHHHHTT--EECCCCSGGGEEECGGGCEEECCCTTCEECC--
T ss_pred EEEecc-CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC--EecCCCCHHHEEECCCCCEEEccceeeeecccC
Confidence 999999 67999999877778999999999999999999999998 999999999999999999999999998765543
Q ss_pred cccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhcccccccCCCCCCHHHHHHH
Q 003963 660 YLTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAAIV 739 (783)
Q Consensus 660 ~~~~~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~l~~LI 739 (783)
. ......||+.|+|||++.+ .++.++|||||||++|+|++|..||..... ...+........++..+++++.+||
T Consensus 211 ~-~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~l~~li 285 (311)
T 3p1a_A 211 G-AGEVQEGDPRYMAPELLQG-SYGTAADVFSLGLTILEVACNMELPHGGEG---WQQLRQGYLPPEFTAGLSSELRSVL 285 (311)
T ss_dssp -----CCCCCGGGCCGGGGGT-CCSTHHHHHHHHHHHHHHHHTCCCCSSHHH---HHHHTTTCCCHHHHTTSCHHHHHHH
T ss_pred C-CCcccCCCccccCHhHhcC-CCCchhhHHHHHHHHHHHHhCCCCCCCccH---HHHHhccCCCcccccCCCHHHHHHH
Confidence 2 2334569999999999887 689999999999999999999766654322 2222222223345567899999999
Q ss_pred HHhhhhCCCCCCCHHHHHHHHHHHHHHHhhc
Q 003963 740 ESCWHSDPQCRPSFQELVDKLRDLQRQYFQA 770 (783)
Q Consensus 740 ~~cL~~dP~~RPsa~ell~~L~~L~~~~f~~ 770 (783)
.+||+.||.+|||+.++ |+|+||+.
T Consensus 286 ~~~L~~dP~~Rpt~~el------l~hp~~~~ 310 (311)
T 3p1a_A 286 VMMLEPDPKLRATAEAL------LALPVLRQ 310 (311)
T ss_dssp HHHSCSSTTTSCCHHHH------HTSGGGSC
T ss_pred HHHcCCChhhCcCHHHH------HhCccccC
Confidence 99999999999999999 67899975
No 94
>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*
Probab=100.00 E-value=9e-42 Score=380.66 Aligned_cols=258 Identities=24% Similarity=0.390 Sum_probs=217.1
Q ss_pred cccceeEeeeeccCCcEEEEEEEEeCCceEEEEEEecccCCHHHHHHHHHHHHHHHhCC--CCceeeEeceeecCCceEE
Q 003963 503 LWEDLTIGEQIGQGSCGTVYHAVWYGSQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLR--HPNVLLFMGAVTSPQRLCI 580 (783)
Q Consensus 503 ~~~~y~i~~~LG~G~fG~Vy~a~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~--HpnIv~l~~~~~~~~~~~l 580 (783)
...+|++.++||+|+||.||++.+..++.||||++............+.+|+.+|+.+. |||||++++++...+.+|+
T Consensus 54 ~~~~y~~~~~LG~G~fg~Vy~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~~~~~l 133 (390)
T 2zmd_A 54 KGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYM 133 (390)
T ss_dssp TTEEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEE
T ss_pred cCCceEEEEEEccCCCeEEEEEEcCCCCEEEEEEEecccccHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecCCEEEE
Confidence 34679999999999999999999877788999999887777777788999999999996 5999999999999999999
Q ss_pred EEEecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCccccccc
Q 003963 581 VTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETY 660 (783)
Q Consensus 581 V~E~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~ 660 (783)
|||+ .+++|.+++.... .+++..++.++.||+.||.|||+++ |+||||||+||||+ ++.+||+|||+++......
T Consensus 134 v~E~-~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~aL~~lH~~~--ivHrDlkp~NIll~-~~~~kl~DFG~a~~~~~~~ 208 (390)
T 2zmd_A 134 VMEC-GNIDLNSWLKKKK-SIDPWERKSYWKNMLEAVHTIHQHG--IVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDT 208 (390)
T ss_dssp EEEC-CSEEHHHHHHHCS-SCCHHHHHHHHHHHHHHHHHHHTTT--CCCCCCCGGGEEES-SSCEEECCCSSSCCC----
T ss_pred EEec-CCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCC--eeecCCCHHHEEEE-CCeEEEEecCccccccCCC
Confidence 9995 5789999998754 6888899999999999999999998 99999999999995 5799999999998654332
Q ss_pred --ccccCCCCCCcccCcccccC-----------CCCCchhHHHHHHHHHHHHHcCCCCCCCCC-hHHHHHHhhccccccc
Q 003963 661 --LTTKTGKGTPQWMAPEVLRN-----------EPSDEKSDVYSFGVILWELATEKIPWDNLN-SMQVIGAVGFMNQRLE 726 (783)
Q Consensus 661 --~~~~~~~Gt~~Y~aPE~~~~-----------~~~s~~sDIwSLG~il~elltG~~Pf~~~~-~~~~~~~i~~~~~~~~ 726 (783)
......+||+.|+|||++.+ ..++.++|||||||+||+|++|..||.... ....+..+........
T Consensus 209 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~~~~~~~~~~~~~ 288 (390)
T 2zmd_A 209 TSVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIE 288 (390)
T ss_dssp -----CCSCCCGGGCCHHHHHCC------------CCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHHCTTSCCC
T ss_pred ccccCCCCCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHHHHHHHHCCCcchhhhHHHHHHHHHhCccccCC
Confidence 12335679999999999876 368899999999999999999999998754 3344444433344556
Q ss_pred CCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhcC
Q 003963 727 IPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQAS 771 (783)
Q Consensus 727 ~~~~~s~~l~~LI~~cL~~dP~~RPsa~ell~~L~~L~~~~f~~~ 771 (783)
++...+.++.+||.+||..||.+||++.++ |+|+||+..
T Consensus 289 ~~~~~~~~~~~li~~~L~~dP~~Rps~~el------l~hp~~~~~ 327 (390)
T 2zmd_A 289 FPDIPEKDLQDVLKCCLKRDPKQRISIPEL------LAHPYVQIQ 327 (390)
T ss_dssp CCCCSCHHHHHHHHHHTCSSTTTSCCHHHH------HTSHHHHSC
T ss_pred CCccchHHHHHHHHHHcccChhhCCCHHHH------hhCcCcccc
Confidence 777789999999999999999999999999 678898754
No 95
>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*
Probab=100.00 E-value=9.7e-42 Score=374.59 Aligned_cols=256 Identities=31% Similarity=0.457 Sum_probs=221.3
Q ss_pred ccceeEeeeeccCCcEEEEEEEEe-CCceEEEEEEecccCC-HHHHHHHHHHHHHHHhCCCCceeeEeceeecCCceEEE
Q 003963 504 WEDLTIGEQIGQGSCGTVYHAVWY-GSQDVAVKVFSRQEYS-DEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIV 581 (783)
Q Consensus 504 ~~~y~i~~~LG~G~fG~Vy~a~~~-~~~~vAiK~i~~~~~~-~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lV 581 (783)
.+.|++.+.||+|+||.||+|.+. .++.||||++...... ......+.+|+.+++.++|||||++++++...+..++|
T Consensus 53 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv 132 (348)
T 1u5q_A 53 EKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLV 132 (348)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred hhheeeeeEEccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCeEEEE
Confidence 457999999999999999999975 4577999999766443 34557889999999999999999999999999999999
Q ss_pred EEecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCcccccccc
Q 003963 582 TEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETYL 661 (783)
Q Consensus 582 ~E~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~~ 661 (783)
|||+. |+|.+++......+++..++.++.||+.||.|||+++ |+||||||+||||+.++.+||+|||++......
T Consensus 133 ~e~~~-g~l~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~--ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~-- 207 (348)
T 1u5q_A 133 MEYCL-GSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHN--MIHRDVKAGNILLSEPGLVKLGDFGSASIMAPA-- 207 (348)
T ss_dssp EECCS-EEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTT--CBCCCCSGGGEEEETTTEEEECCCTTCBSSSSB--
T ss_pred EecCC-CCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC--eeeCCCCHHHEEECCCCCEEEeeccCceecCCC--
Confidence 99996 6898888766677999999999999999999999998 999999999999999999999999999765432
Q ss_pred cccCCCCCCcccCccccc---CCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhcccccccCCCCCCHHHHHH
Q 003963 662 TTKTGKGTPQWMAPEVLR---NEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAAI 738 (783)
Q Consensus 662 ~~~~~~Gt~~Y~aPE~~~---~~~~s~~sDIwSLG~il~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~l~~L 738 (783)
....||+.|+|||++. +..++.++|||||||++|+|++|..||...+.......+.........+..+++.+.+|
T Consensus 208 --~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 285 (348)
T 1u5q_A 208 --NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPALQSGHWSEYFRNF 285 (348)
T ss_dssp --CCCCSCGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCCCCCCCTTSCHHHHHH
T ss_pred --CcccCCcceeCHhhhccccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCCCCCCCCCHHHHHH
Confidence 3457899999999985 56789999999999999999999999998887766655543333334456789999999
Q ss_pred HHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhcCc
Q 003963 739 VESCWHSDPQCRPSFQELVDKLRDLQRQYFQASR 772 (783)
Q Consensus 739 I~~cL~~dP~~RPsa~ell~~L~~L~~~~f~~~~ 772 (783)
|.+||+.||.+|||+.++ ++|+||...+
T Consensus 286 i~~~l~~dP~~Rps~~~l------l~h~~~~~~~ 313 (348)
T 1u5q_A 286 VDSCLQKIPQDRPTSEVL------LKHRFVLRER 313 (348)
T ss_dssp HHHHTCSSGGGSCCHHHH------TTCHHHHSCC
T ss_pred HHHHcccChhhCcCHHHH------hhChhhhccC
Confidence 999999999999999999 5678886554
No 96
>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}
Probab=100.00 E-value=6.6e-42 Score=389.42 Aligned_cols=260 Identities=25% Similarity=0.289 Sum_probs=199.5
Q ss_pred ccceeEeeeeccCCcEEEEEEEEeC-CceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEeceeec-----CCc
Q 003963 504 WEDLTIGEQIGQGSCGTVYHAVWYG-SQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTS-----PQR 577 (783)
Q Consensus 504 ~~~y~i~~~LG~G~fG~Vy~a~~~~-~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~-----~~~ 577 (783)
.++|+++++||+|+||.||+|.+.. ++.||||++..........+.+.+|+.+|+.++|||||++++++.. ...
T Consensus 52 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 131 (458)
T 3rp9_A 52 PDRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFDE 131 (458)
T ss_dssp CTTEEECCC-------CEEEEEECC--CEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCC
T ss_pred CCCeEEeeEeeecCCeEEEEEEECCCCcEEEEEEechhhcCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCcccCce
Confidence 4789999999999999999999864 5679999997766666667889999999999999999999999843 356
Q ss_pred eEEEEEecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCcccc
Q 003963 578 LCIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKH 657 (783)
Q Consensus 578 ~~lV~E~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~ 657 (783)
+|+||||+ +++|.+++.. ...+++..++.++.||+.||+|||+++ ||||||||+||||+.++.+||+|||+++...
T Consensus 132 ~~lv~e~~-~~~L~~~~~~-~~~l~~~~~~~~~~qi~~aL~~LH~~~--iiHrDlKp~NILl~~~~~~kl~DFGla~~~~ 207 (458)
T 3rp9_A 132 LYVVLEIA-DSDFKKLFRT-PVYLTELHIKTLLYNLLVGVKYVHSAG--ILHRDLKPANCLVNQDCSVKVCDFGLARTVD 207 (458)
T ss_dssp EEEEECCC-SEEHHHHHHS-SCCCCHHHHHHHHHHHHHHHHHHHHTT--CBCCCCCGGGEEECTTCCEEECCCTTCBCTT
T ss_pred EEEEEecc-ccchhhhccc-CCCCCHHHHHHHHHHHHHHHHHHHhCC--cCCCCCChhhEEECCCCCEeecccccchhcc
Confidence 89999999 5699999975 356999999999999999999999998 9999999999999999999999999998654
Q ss_pred ccc---------------------------ccccCCCCCCcccCcccc-cCCCCCchhHHHHHHHHHHHHHc--------
Q 003963 658 ETY---------------------------LTTKTGKGTPQWMAPEVL-RNEPSDEKSDVYSFGVILWELAT-------- 701 (783)
Q Consensus 658 ~~~---------------------------~~~~~~~Gt~~Y~aPE~~-~~~~~s~~sDIwSLG~il~ellt-------- 701 (783)
... ......+||+.|+|||++ .+..++.++|||||||+||||++
T Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~DiwSlG~il~elltg~~~~~~~ 287 (458)
T 3rp9_A 208 YPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNMIKENVAY 287 (458)
T ss_dssp SCTTCCCCCC---------------------------CCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHTTSTTTCSS
T ss_pred CccccccccccCccccccccccccccccccccccCCcccccccChHHhhCCCCCCcHhHHHHHHHHHHHHHHhccccccc
Confidence 221 112345789999999986 56679999999999999999999
Q ss_pred ---CCCCCCCCChH--------------------HHHHHhhcc-----------------------------cccccCCC
Q 003963 702 ---EKIPWDNLNSM--------------------QVIGAVGFM-----------------------------NQRLEIPK 729 (783)
Q Consensus 702 ---G~~Pf~~~~~~--------------------~~~~~i~~~-----------------------------~~~~~~~~ 729 (783)
|.++|.+.... ..+..+... ........
T Consensus 288 ~~~~~p~f~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 367 (458)
T 3rp9_A 288 HADRGPLFPGSSCFPLSPDQKAGNDFKFHTRGNRDQLNVIFNILGTPSEEDIEALEKEDAKRYIRIFPKREGTDLAERFP 367 (458)
T ss_dssp GGGCCCSCC--------------------CHHHHHHHHHHHHHHCCCCHHHHHTSSCHHHHHHHTTSCCCCCCCGGGGST
T ss_pred cccccccCCCCccccccccccccccccccccCCHHHHHHHHHHcCCCCHHHHhhcCCHHHHHHHHhcCCCCCCCHHHHCC
Confidence 67777554310 111110000 00011234
Q ss_pred CCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhcCcC
Q 003963 730 DVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQASRS 773 (783)
Q Consensus 730 ~~s~~l~~LI~~cL~~dP~~RPsa~ell~~L~~L~~~~f~~~~~ 773 (783)
.+++++.+||.+||..||.+|||+.++ |+|+||+..+.
T Consensus 368 ~~s~~~~dLl~~mL~~dP~~R~t~~e~------L~Hp~f~~~~~ 405 (458)
T 3rp9_A 368 ASSADAIHLLKRMLVFNPNKRITINEC------LAHPFFKEVRI 405 (458)
T ss_dssp TSCHHHHHHHHHHSCSSTTTSCCHHHH------HHSGGGTTTCC
T ss_pred CCCHHHHHHHHHHhccCccccCCHHHH------hcCHhhhhcCC
Confidence 568999999999999999999999999 78999987643
No 97
>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*
Probab=100.00 E-value=7.7e-42 Score=363.29 Aligned_cols=257 Identities=35% Similarity=0.636 Sum_probs=217.0
Q ss_pred ccccceeEeeeeccCCcEEEEEEEEe-CCceEEEEEEecccCCH--HHH---HHHHHHHHHHHhCCCCceeeEeceeecC
Q 003963 502 ILWEDLTIGEQIGQGSCGTVYHAVWY-GSQDVAVKVFSRQEYSD--EVI---HSFRQEVSLMKRLRHPNVLLFMGAVTSP 575 (783)
Q Consensus 502 ~~~~~y~i~~~LG~G~fG~Vy~a~~~-~~~~vAiK~i~~~~~~~--~~~---~~~~~Ei~il~~l~HpnIv~l~~~~~~~ 575 (783)
...++|++.+.||+|+||.||+|.+. .++.||||++....... ... +.+.+|+.+++.++||||+++++++...
T Consensus 16 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~ 95 (287)
T 4f0f_A 16 LADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNP 95 (287)
T ss_dssp CCSTTEEEEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEETTT
T ss_pred hhhccceehhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeecCC
Confidence 34578999999999999999999985 45789999987654322 111 6788999999999999999999998765
Q ss_pred CceEEEEEecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCc-----EEEEec
Q 003963 576 QRLCIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWT-----VKVGDF 650 (783)
Q Consensus 576 ~~~~lV~E~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~-----vkL~DF 650 (783)
. ++||||+++++|.+++......+++..++.++.||+.||+|||+++.+|+||||||+|||++.++. +||+||
T Consensus 96 ~--~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~~ivH~dikp~Nil~~~~~~~~~~~~kl~Df 173 (287)
T 4f0f_A 96 P--RMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADF 173 (287)
T ss_dssp T--EEEEECCTTCBHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHTSSSCCBCSCCSGGGEEESCCCTTCSCCEEECCC
T ss_pred C--eEEEEecCCCCHHHHHhcccCCccHHHHHHHHHHHHHHHHHHHhCCCCeecCCCCcceEEEeccCCCCceeEEeCCC
Confidence 5 799999999999999987777899999999999999999999998766999999999999988776 999999
Q ss_pred CCCcccccccccccCCCCCCcccCccccc--CCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHH--HHHhhccccccc
Q 003963 651 GLSRLKHETYLTTKTGKGTPQWMAPEVLR--NEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQV--IGAVGFMNQRLE 726 (783)
Q Consensus 651 Gla~~~~~~~~~~~~~~Gt~~Y~aPE~~~--~~~~s~~sDIwSLG~il~elltG~~Pf~~~~~~~~--~~~i~~~~~~~~ 726 (783)
|+++..... .....||+.|+|||++. ...++.++|||||||++|+|++|..||........ ...+........
T Consensus 174 g~~~~~~~~---~~~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~ 250 (287)
T 4f0f_A 174 GLSQQSVHS---VSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIREEGLRPT 250 (287)
T ss_dssp TTCBCCSSC---EECCCCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHHHHHHSSCTTTTCCCCHHHHHHHHHHSCCCCC
T ss_pred Ccccccccc---ccccCCCccccCchhhccCCCCcCchhhHHHHHHHHHHHHcCCCCCccccccHHHHHHHHhccCCCCC
Confidence 999754432 33467899999999984 45578999999999999999999999987654333 334434445667
Q ss_pred CCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHH
Q 003963 727 IPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDL 763 (783)
Q Consensus 727 ~~~~~s~~l~~LI~~cL~~dP~~RPsa~ell~~L~~L 763 (783)
++..+++.+.+||.+||..||.+|||+.++++.|++|
T Consensus 251 ~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~l 287 (287)
T 4f0f_A 251 IPEDCPPRLRNVIELCWSGDPKKRPHFSYIVKELSEL 287 (287)
T ss_dssp CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTC
T ss_pred CCcccCHHHHHHHHHHhcCChhhCcCHHHHHHHHHhC
Confidence 7888999999999999999999999999999998753
No 98
>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...
Probab=100.00 E-value=2.3e-41 Score=368.55 Aligned_cols=266 Identities=29% Similarity=0.555 Sum_probs=228.7
Q ss_pred cccccccceeEeeeeccCCcEEEEEEEEe--------CCceEEEEEEecccCCHHHHHHHHHHHHHHHhC-CCCceeeEe
Q 003963 499 DYEILWEDLTIGEQIGQGSCGTVYHAVWY--------GSQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRL-RHPNVLLFM 569 (783)
Q Consensus 499 ~~e~~~~~y~i~~~LG~G~fG~Vy~a~~~--------~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l-~HpnIv~l~ 569 (783)
.+++..++|++.+.||+|+||.||+|.+. .+..||||++.... .......+.+|+.+++.+ +||||++++
T Consensus 29 ~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~~hp~iv~~~ 107 (334)
T 2pvf_A 29 KWEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDA-TEKDLSDLVSEMEMMKMIGKHKNIINLL 107 (334)
T ss_dssp TTBCCGGGEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTC-CHHHHHHHHHHHHHHHHHCCCTTBCCEE
T ss_pred cccCCHhHeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCC-cHHHHHHHHHHHHHHHHhhcCCCEeeEE
Confidence 45667789999999999999999999874 34569999987543 445567889999999999 899999999
Q ss_pred ceeecCCceEEEEEecCCCCHHHHHhhcC---------------CcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCC
Q 003963 570 GAVTSPQRLCIVTEFLPRGSLFRLLQRNT---------------TKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKS 634 (783)
Q Consensus 570 ~~~~~~~~~~lV~E~~~ggsL~~~L~~~~---------------~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp 634 (783)
+++...+.+|+||||+++++|.+++.... ..+++..++.++.||+.||.|||+++ |+||||||
T Consensus 108 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~--ivH~Dlkp 185 (334)
T 2pvf_A 108 GACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQK--CIHRDLAA 185 (334)
T ss_dssp EEECSSSCCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHHHTT--EECSCCSG
T ss_pred EEEccCCceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCC--eeCCCCcc
Confidence 99999999999999999999999997643 23889999999999999999999998 99999999
Q ss_pred CCEEEcCCCcEEEEecCCCccccccc--ccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCCh
Q 003963 635 SNLLVDKHWTVKVGDFGLSRLKHETY--LTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELAT-EKIPWDNLNS 711 (783)
Q Consensus 635 ~NILl~~~~~vkL~DFGla~~~~~~~--~~~~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~ellt-G~~Pf~~~~~ 711 (783)
+||||+.++.+||+|||++....... .......+++.|+|||++.+..++.++|||||||++|+|++ |..||.....
T Consensus 186 ~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~ 265 (334)
T 2pvf_A 186 RNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPV 265 (334)
T ss_dssp GGEEECTTCCEEECCCTTCEECTTTSSEECCSCCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCH
T ss_pred ceEEEcCCCCEEEccccccccccccccccccCCCCcccceeChHHhcCCCcChHHHHHHHHHHHHHHHhCCCCCcCcCCH
Confidence 99999999999999999997654432 12234457889999999998889999999999999999999 9999998887
Q ss_pred HHHHHHhhcccccccCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHh
Q 003963 712 MQVIGAVGFMNQRLEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYF 768 (783)
Q Consensus 712 ~~~~~~i~~~~~~~~~~~~~s~~l~~LI~~cL~~dP~~RPsa~ell~~L~~L~~~~f 768 (783)
......+.. ......+..+++++.+||.+||..||.+||++.++++.|+++....-
T Consensus 266 ~~~~~~~~~-~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~l~~~~~ 321 (334)
T 2pvf_A 266 EELFKLLKE-GHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILTLTT 321 (334)
T ss_dssp HHHHHHHHH-TCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHhc-CCCCCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhccc
Confidence 776655432 23456678899999999999999999999999999999999976543
No 99
>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...
Probab=100.00 E-value=1.8e-41 Score=359.00 Aligned_cols=262 Identities=32% Similarity=0.567 Sum_probs=226.3
Q ss_pred cccccccceeEeeeeccCCcEEEEEEEEeCCceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEeceeecCCce
Q 003963 499 DYEILWEDLTIGEQIGQGSCGTVYHAVWYGSQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRL 578 (783)
Q Consensus 499 ~~e~~~~~y~i~~~LG~G~fG~Vy~a~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~ 578 (783)
+|++..++|++.+.||+|+||.||+|.+.+++.||||++....... ..+.+|+.+++.++||||+++++++. .+..
T Consensus 7 ~~~v~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~---~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~ 82 (279)
T 1qpc_A 7 EWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSP---DAFLAEANLMKQLQHQRLVRLYAVVT-QEPI 82 (279)
T ss_dssp TTBCCGGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTSSCH---HHHHHHHHHHHHCCCTTBCCEEEEEC-SSSC
T ss_pred hcccCHHhhhheeeecCCCCeEEEEEEEcCCcEEEEEEecCCcccH---HHHHHHHHHHHhCCCcCcceEEEEEc-CCCc
Confidence 4677789999999999999999999998877789999997655443 56889999999999999999999886 4568
Q ss_pred EEEEEecCCCCHHHHHhhcC-CcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCcccc
Q 003963 579 CIVTEFLPRGSLFRLLQRNT-TKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKH 657 (783)
Q Consensus 579 ~lV~E~~~ggsL~~~L~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~ 657 (783)
++||||+++++|.+++.... ..+++..++.++.||+.||+|||+++ |+|+||||+|||++.++.+||+|||++....
T Consensus 83 ~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~--i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~ 160 (279)
T 1qpc_A 83 YIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN--YIHRDLRAANILVSDTLSCKIADFGLARLIE 160 (279)
T ss_dssp EEEEECCTTCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHHHTT--EECSCCSGGGEEECTTSCEEECCCTTCEECS
T ss_pred EEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCC--eeccCCCHhhEEEcCCCCEEECCCccccccc
Confidence 99999999999999997532 25899999999999999999999998 9999999999999999999999999998665
Q ss_pred cccc-cccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCChHHHHHHhhcccccccCCCCCCHHH
Q 003963 658 ETYL-TTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELAT-EKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRW 735 (783)
Q Consensus 658 ~~~~-~~~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~l 735 (783)
.... ......+++.|+|||++.+..++.++|||||||++|+|++ |..||......+....+.. ......+..+++++
T Consensus 161 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l 239 (279)
T 1qpc_A 161 DNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLER-GYRMVRPDNCPEEL 239 (279)
T ss_dssp SSCEECCTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHT-TCCCCCCTTCCHHH
T ss_pred CcccccccCCCCccCccChhhhccCCCCchhhhHHHHHHHHHHHhCCCCCCcccCHHHHHHHHhc-ccCCCCcccccHHH
Confidence 4322 2233456889999999998889999999999999999999 9999998888776665532 23455677899999
Q ss_pred HHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHH
Q 003963 736 AAIVESCWHSDPQCRPSFQELVDKLRDLQRQY 767 (783)
Q Consensus 736 ~~LI~~cL~~dP~~RPsa~ell~~L~~L~~~~ 767 (783)
.+||.+||..||.+|||+.++++.|+++....
T Consensus 240 ~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~ 271 (279)
T 1qpc_A 240 YQLMRLCWKERPEDRPTFDYLRSVLEDFFTAT 271 (279)
T ss_dssp HHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHhccChhhCCCHHHHHHHHHHHHHhc
Confidence 99999999999999999999999998876554
No 100
>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*
Probab=100.00 E-value=1.2e-41 Score=366.57 Aligned_cols=271 Identities=31% Similarity=0.483 Sum_probs=220.8
Q ss_pred CCCCcccccccccceeEeeeeccCCcEEEEEEEEeC----CceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeE
Q 003963 493 LDNDCLDYEILWEDLTIGEQIGQGSCGTVYHAVWYG----SQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLF 568 (783)
Q Consensus 493 ~~~~~~~~e~~~~~y~i~~~LG~G~fG~Vy~a~~~~----~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l 568 (783)
+......+.+..++|.+.+.||+|+||.||+|.+.. +..||||++............+.+|+.+++.++||||+++
T Consensus 22 l~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~ 101 (313)
T 3brb_A 22 LQNKLEDVVIDRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRL 101 (313)
T ss_dssp --CCTTTTBCCGGGEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCHHHHHHHHHHHHHHHTCCCTTBCCC
T ss_pred hhhhHHhcccCHHHeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccchhHHHHHHHHHHHHhcCCCCCeeee
Confidence 344445566778899999999999999999998764 2469999998777677777889999999999999999999
Q ss_pred eceeecCC-----ceEEEEEecCCCCHHHHHhh-----cCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEE
Q 003963 569 MGAVTSPQ-----RLCIVTEFLPRGSLFRLLQR-----NTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLL 638 (783)
Q Consensus 569 ~~~~~~~~-----~~~lV~E~~~ggsL~~~L~~-----~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NIL 638 (783)
++++.... ..++||||+++++|.+++.. ....+++..++.++.||+.||.|||+++ |+||||||+|||
T Consensus 102 ~~~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~--ivH~dikp~NIl 179 (313)
T 3brb_A 102 LGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNRN--FLHRDLAARNCM 179 (313)
T ss_dssp CEEEEC-------CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHHTTT--CCCCCCSGGGEE
T ss_pred eEEEeeccccCCcccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHHhCC--cccCCCCcceEE
Confidence 99997654 45999999999999999843 2356899999999999999999999998 999999999999
Q ss_pred EcCCCcEEEEecCCCccccccc--ccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCChHHHH
Q 003963 639 VDKHWTVKVGDFGLSRLKHETY--LTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELAT-EKIPWDNLNSMQVI 715 (783)
Q Consensus 639 l~~~~~vkL~DFGla~~~~~~~--~~~~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~ellt-G~~Pf~~~~~~~~~ 715 (783)
|+.++.+||+|||++....... .......+++.|+|||++.+..++.++|||||||++|+|++ |..||.........
T Consensus 180 i~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~ 259 (313)
T 3brb_A 180 LRDDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNHEMY 259 (313)
T ss_dssp ECTTSCEEECSCSCC----------------CCGGGSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHH
T ss_pred EcCCCcEEEeecCcceecccccccCcccccCCCccccCchhhcCCCccchhhhHHHHHHHHHHHhcCCCCCccCCHHHHH
Confidence 9999999999999997654322 12233457889999999999999999999999999999999 99999888777666
Q ss_pred HHhhcccccccCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHH
Q 003963 716 GAVGFMNQRLEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQ 766 (783)
Q Consensus 716 ~~i~~~~~~~~~~~~~s~~l~~LI~~cL~~dP~~RPsa~ell~~L~~L~~~ 766 (783)
..+. .......+..+++.+.+||.+||..||.+||++.++++.|+++...
T Consensus 260 ~~~~-~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~l~~~ 309 (313)
T 3brb_A 260 DYLL-HGHRLKQPEDCLDELYEIMYSCWRTDPLDRPTFSVLRLQLEKLLES 309 (313)
T ss_dssp HHHH-TTCCCCCBTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred HHHH-cCCCCCCCccccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHh
Confidence 5543 2335566788999999999999999999999999999999988765
No 101
>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*
Probab=100.00 E-value=1.9e-42 Score=376.70 Aligned_cols=260 Identities=22% Similarity=0.306 Sum_probs=207.6
Q ss_pred cccceeEeeeeccCCcEEEEEEEEeC-CceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEeceeecCCceEEE
Q 003963 503 LWEDLTIGEQIGQGSCGTVYHAVWYG-SQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIV 581 (783)
Q Consensus 503 ~~~~y~i~~~LG~G~fG~Vy~a~~~~-~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lV 581 (783)
..++|++.++||+|+||.||+|.+.. ++.||||++............+.+|+.+++.++||||+++++++.....+|+|
T Consensus 32 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 111 (329)
T 3gbz_A 32 SIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSVIHHNHRLHLI 111 (329)
T ss_dssp CGGGEEEEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC--------CHHHHHHGGGCCCTTBCCEEEEEEETTEEEEE
T ss_pred chhhEEEEEEEEecCCeEEEEEEECCCCceEEEEEEcccccccccchhHHHHHHHHHHcCCCCcceEEEEEecCCEEEEE
Confidence 35789999999999999999999764 56799999977665555566788999999999999999999999999999999
Q ss_pred EEecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEc-----CCCcEEEEecCCCccc
Q 003963 582 TEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVD-----KHWTVKVGDFGLSRLK 656 (783)
Q Consensus 582 ~E~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~-----~~~~vkL~DFGla~~~ 656 (783)
|||++ ++|.+++.... .+++..++.++.||+.||.|||+++ |+||||||+||||+ ..+.+||+|||++...
T Consensus 112 ~e~~~-~~L~~~~~~~~-~~~~~~~~~i~~ql~~~l~~LH~~~--ivH~Dlkp~NIll~~~~~~~~~~~kl~Dfg~a~~~ 187 (329)
T 3gbz_A 112 FEYAE-NDLKKYMDKNP-DVSMRVIKSFLYQLINGVNFCHSRR--CLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAF 187 (329)
T ss_dssp EECCS-EEHHHHHHHCT-TCCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCCGGGEEEEC-----CCEEEECCTTHHHHH
T ss_pred EecCC-CCHHHHHhhcC-CCCHHHHHHHHHHHHHHHHHHHhCC--EECCCCCHHHEEEecCCCCccceEEECcCCCcccc
Confidence 99997 59999997654 5899999999999999999999998 99999999999994 5556999999999766
Q ss_pred ccccccccCCCCCCcccCcccccCCC-CCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccccccc---------
Q 003963 657 HETYLTTKTGKGTPQWMAPEVLRNEP-SDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLE--------- 726 (783)
Q Consensus 657 ~~~~~~~~~~~Gt~~Y~aPE~~~~~~-~s~~sDIwSLG~il~elltG~~Pf~~~~~~~~~~~i~~~~~~~~--------- 726 (783)
...........||+.|+|||++.+.. ++.++|||||||++|+|++|..||........+..+......+.
T Consensus 188 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (329)
T 3gbz_A 188 GIPIRQFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEIDQLFKIFEVLGLPDDTTWPGVTA 267 (329)
T ss_dssp C-----------CCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTTTSTTGGG
T ss_pred CCcccccCCCcCCccccCHHHhcCCCCCCcHHHHHHHHHHHHHHHHCCCCcCCCCHHHHHHHHHHHhCCCchhhhhhhhh
Confidence 54444444567899999999998754 79999999999999999999999998877665554422111000
Q ss_pred -------------------CCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhcCc
Q 003963 727 -------------------IPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQASR 772 (783)
Q Consensus 727 -------------------~~~~~s~~l~~LI~~cL~~dP~~RPsa~ell~~L~~L~~~~f~~~~ 772 (783)
++..+++++.+||.+||+.||.+|||+.++ |+|+||+.+.
T Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~------l~hp~f~~~~ 326 (329)
T 3gbz_A 268 LPDWKQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNA------LEHPYFSHND 326 (329)
T ss_dssp STTCCTTCCCCCCCCHHHHHGGGSCHHHHHHHHHHTCSSGGGSCCHHHH------HTSGGGSSSC
T ss_pred hhhhhhhhhhhccccHhhhcccccCHHHHHHHHHHccCChhhCCCHHHH------hCCcccCCCC
Confidence 011267899999999999999999999999 7899998764
No 102
>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A
Probab=100.00 E-value=1e-41 Score=387.27 Aligned_cols=257 Identities=32% Similarity=0.605 Sum_probs=222.7
Q ss_pred cccccccceeEeeeeccCCcEEEEEEEEeCCceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEeceeecCC-c
Q 003963 499 DYEILWEDLTIGEQIGQGSCGTVYHAVWYGSQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQ-R 577 (783)
Q Consensus 499 ~~e~~~~~y~i~~~LG~G~fG~Vy~a~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~-~ 577 (783)
.+++..++|++.++||+|+||.||++.+. ++.||||+++.... .+.+.+|+.+|+.++|||||++++++.... .
T Consensus 187 ~~~i~~~~~~~~~~lG~G~fg~V~~~~~~-~~~vavK~~~~~~~----~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 261 (450)
T 1k9a_A 187 GWALNMKELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDAT----AQAFLAEASVMTQLRHSNLVQLLGVIVEEKGG 261 (450)
T ss_dssp TCBCCGGGEEEEEEEEECSSEEEEEEEET-TEEEEEEEESSCTT----SHHHHHHHHHHHTCCCTTBCCEEEEEECTTSC
T ss_pred ccccChHHeEEEeeecCcCCeeEEEEEec-CCeEEEEEeCCchH----HHHHHHHHHHHHhccCCCEEEEEEEEEcCCCc
Confidence 45677889999999999999999999876 56899999976542 356889999999999999999999987655 7
Q ss_pred eEEEEEecCCCCHHHHHhhcCC-cchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCccc
Q 003963 578 LCIVTEFLPRGSLFRLLQRNTT-KLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLK 656 (783)
Q Consensus 578 ~~lV~E~~~ggsL~~~L~~~~~-~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~ 656 (783)
+|+|||||++|+|.+++..... .+++..++.++.||+.||+|||+++ |+||||||+||||+.++.+||+|||+++..
T Consensus 262 ~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~--ivHrDlkp~Nill~~~~~~kl~DfG~a~~~ 339 (450)
T 1k9a_A 262 LYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNN--FVHRDLAARNVLVSEDNVAKVSDFGLTKEA 339 (450)
T ss_dssp EEEEEECCTTCBHHHHHHHHCTTTCCHHHHHHHHHHHHHHHHHHHHTT--EECSCCCGGGEEECTTSCEEECCCTTCEEC
T ss_pred eEEEEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC--eeCCCCCHhhEEECCCCCEEEeeCCCcccc
Confidence 9999999999999999986543 3689999999999999999999998 999999999999999999999999999754
Q ss_pred ccccccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCChHHHHHHhhcccccccCCCCCCHHH
Q 003963 657 HETYLTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELAT-EKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRW 735 (783)
Q Consensus 657 ~~~~~~~~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~l 735 (783)
... .....+++.|+|||++.+..++.++|||||||+||||++ |..||...+..+....+. ...+...|..+++.+
T Consensus 340 ~~~---~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~~~~~i~-~~~~~~~p~~~~~~l 415 (450)
T 1k9a_A 340 SST---QDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVE-KGYKMDAPDGCPPAV 415 (450)
T ss_dssp C---------CCCTTTSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTTCCSSTTSCTTTHHHHHH-TTCCCCCCTTCCHHH
T ss_pred ccc---ccCCCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHH-cCCCCCCCCcCCHHH
Confidence 332 223467889999999999999999999999999999998 999999887766665553 334567788899999
Q ss_pred HHHHHHhhhhCCCCCCCHHHHHHHHHHHHHH
Q 003963 736 AAIVESCWHSDPQCRPSFQELVDKLRDLQRQ 766 (783)
Q Consensus 736 ~~LI~~cL~~dP~~RPsa~ell~~L~~L~~~ 766 (783)
.+||.+||..||.+|||+.++++.|+.++..
T Consensus 416 ~~li~~cl~~dp~~Rpt~~~l~~~L~~i~~~ 446 (450)
T 1k9a_A 416 YDVMKNCWHLDAATRPTFLQLREQLEHIRTH 446 (450)
T ss_dssp HHHHHHHTCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred HHHHHHHcCCChhHCcCHHHHHHHHHHHHHh
Confidence 9999999999999999999999999888654
No 103
>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}
Probab=100.00 E-value=6.2e-42 Score=391.09 Aligned_cols=260 Identities=27% Similarity=0.524 Sum_probs=226.3
Q ss_pred cccccceeEeeeeccCCcEEEEEEEEe-CCceEEEEEEecccCCH-HHHHHHHHHHHHHHhCCCCceeeEeceeecCCce
Q 003963 501 EILWEDLTIGEQIGQGSCGTVYHAVWY-GSQDVAVKVFSRQEYSD-EVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRL 578 (783)
Q Consensus 501 e~~~~~y~i~~~LG~G~fG~Vy~a~~~-~~~~vAiK~i~~~~~~~-~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~ 578 (783)
....++|.+++.||+|+||.||+|.+. .++.||||++....... +....+.+|+.+++.++||||+++++++...+.+
T Consensus 12 ~~~~~~Y~l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~ 91 (476)
T 2y94_A 12 RVKIGHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDI 91 (476)
T ss_dssp CCEETTEEEEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEE
T ss_pred CceecCEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEE
Confidence 345689999999999999999999986 46789999997653221 2346788999999999999999999999999999
Q ss_pred EEEEEecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCccccc
Q 003963 579 CIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHE 658 (783)
Q Consensus 579 ~lV~E~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~~ 658 (783)
|+|||||++++|.+++... ..+++..++.++.||+.||.|||+++ |+||||||+|||++.++.+||+|||++.....
T Consensus 92 ~lv~E~~~gg~L~~~l~~~-~~l~~~~~~~i~~qi~~aL~~LH~~g--ivHrDLkp~NIll~~~~~vkL~DFG~a~~~~~ 168 (476)
T 2y94_A 92 FMVMEYVSGGELFDYICKN-GRLDEKESRRLFQQILSGVDYCHRHM--VVHRDLKPENVLLDAHMNAKIADFGLSNMMSD 168 (476)
T ss_dssp EEEEECCSSEEHHHHTTSS-SSCCHHHHHHHHHHHHHHHHHHHTTT--EECSCCSGGGEEECTTCCEEECCCSSCEECCT
T ss_pred EEEEeCCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCC--CCcccccHHHEEEecCCCeEEEeccchhhccc
Confidence 9999999999999999754 46999999999999999999999998 99999999999999999999999999986554
Q ss_pred ccccccCCCCCCcccCcccccCCCC-CchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhcccccccCCCCCCHHHHH
Q 003963 659 TYLTTKTGKGTPQWMAPEVLRNEPS-DEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAA 737 (783)
Q Consensus 659 ~~~~~~~~~Gt~~Y~aPE~~~~~~~-s~~sDIwSLG~il~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~l~~ 737 (783)
.. .....+||+.|+|||++.+..+ +.++|||||||++|+|++|..||...+.......+. ......|..+++++.+
T Consensus 169 ~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~--~~~~~~p~~~s~~~~~ 245 (476)
T 2y94_A 169 GE-FLRTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHVPTLFKKIC--DGIFYTPQYLNPSVIS 245 (476)
T ss_dssp TC-CBCCCCSCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSSCCSSSHHHHHHHH--TTCCCCCTTCCHHHHH
T ss_pred cc-cccccCCCcCeEChhhccCCCCCCCcceehhhHHHHHHHhhCCCCCCCCCHHHHHHHHh--cCCcCCCccCCHHHHH
Confidence 32 2345689999999999998775 789999999999999999999999888777666653 3345667889999999
Q ss_pred HHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhcCc
Q 003963 738 IVESCWHSDPQCRPSFQELVDKLRDLQRQYFQASR 772 (783)
Q Consensus 738 LI~~cL~~dP~~RPsa~ell~~L~~L~~~~f~~~~ 772 (783)
||.+||..||.+|||+.++ +.|+||+...
T Consensus 246 Li~~~L~~dP~~Rpt~~ei------l~hp~~~~~~ 274 (476)
T 2y94_A 246 LLKHMLQVDPMKRATIKDI------REHEWFKQDL 274 (476)
T ss_dssp HHHHHTCSSTTTSCCHHHH------HTCHHHHTTC
T ss_pred HHHHHcCCCchhCcCHHHH------HhCHHhhhcC
Confidence 9999999999999999999 6789997643
No 104
>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A
Probab=100.00 E-value=1.5e-41 Score=361.83 Aligned_cols=260 Identities=31% Similarity=0.504 Sum_probs=219.6
Q ss_pred ccccceeEeeeeccCCcEEEEEEEEeC-CceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEeceeec----CC
Q 003963 502 ILWEDLTIGEQIGQGSCGTVYHAVWYG-SQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTS----PQ 576 (783)
Q Consensus 502 ~~~~~y~i~~~LG~G~fG~Vy~a~~~~-~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~----~~ 576 (783)
.....|++.+.||+|+||.||+|.+.. +..||+|++..........+.+.+|+.+++.++||||+++++++.. ..
T Consensus 23 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~ 102 (290)
T 1t4h_A 23 NDGRFLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKK 102 (290)
T ss_dssp TTSCEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCE
T ss_pred cCceeEEeeeeccCCCCeEEEEeEecCCceEEEEEEecchhhCHHHHHHHHHHHHHHHhCCCCCeeeeeeeeccccCCCc
Confidence 345679999999999999999999865 4679999998887777778889999999999999999999998865 35
Q ss_pred ceEEEEEecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEc-CCCcEEEEecCCCcc
Q 003963 577 RLCIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVD-KHWTVKVGDFGLSRL 655 (783)
Q Consensus 577 ~~~lV~E~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~-~~~~vkL~DFGla~~ 655 (783)
.+++||||+++++|.+++... ..+++..++.++.||+.||.|||+.+.+|+|+||||+|||++ .++.+||+|||++..
T Consensus 103 ~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~~~i~H~dikp~Nil~~~~~~~~kl~Dfg~~~~ 181 (290)
T 1t4h_A 103 CIVLVTELMTSGTLKTYLKRF-KVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATL 181 (290)
T ss_dssp EEEEEEECCCSCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHTSSSCCCCSCCCGGGEEESSTTSCEEECCTTGGGG
T ss_pred eEEEEEEecCCCCHHHHHHHc-cCCCHHHHHHHHHHHHHHHHHHHcCCCCEEECCCCHHHEEEECCCCCEEEeeCCCccc
Confidence 689999999999999999764 458999999999999999999999766699999999999997 789999999999975
Q ss_pred cccccccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChH-HHHHHhhcccccccCCCCCCHH
Q 003963 656 KHETYLTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSM-QVIGAVGFMNQRLEIPKDVDPR 734 (783)
Q Consensus 656 ~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~elltG~~Pf~~~~~~-~~~~~i~~~~~~~~~~~~~s~~ 734 (783)
..... .....||+.|+|||++.+ .++.++|||||||++|+|++|..||...... .....+........++..++++
T Consensus 182 ~~~~~--~~~~~~t~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (290)
T 1t4h_A 182 KRASF--AKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTSGVKPASFDKVAIPE 258 (290)
T ss_dssp CCTTS--BEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHHHHHTTTCCCGGGGGCCCHH
T ss_pred ccccc--cccccCCcCcCCHHHHhc-cCCCcchHHHHHHHHHHHHhCCCCCCCcCcHHHHHHHHhccCCccccCCCCCHH
Confidence 44432 234568999999998875 4899999999999999999999999875443 3444443333344556678899
Q ss_pred HHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhcC
Q 003963 735 WAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQAS 771 (783)
Q Consensus 735 l~~LI~~cL~~dP~~RPsa~ell~~L~~L~~~~f~~~ 771 (783)
+.+||.+||..||.+|||+.++ +.|+||+..
T Consensus 259 l~~li~~~l~~dp~~Rps~~el------l~h~~f~~~ 289 (290)
T 1t4h_A 259 VKEIIEGCIRQNKDERYSIKDL------LNHAFFQEE 289 (290)
T ss_dssp HHHHHHHHSCSSGGGSCCHHHH------HTSGGGC--
T ss_pred HHHHHHHHccCChhhCCCHHHH------hhCcccccC
Confidence 9999999999999999999999 688999753
No 105
>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...
Probab=100.00 E-value=7.9e-42 Score=367.77 Aligned_cols=268 Identities=29% Similarity=0.519 Sum_probs=225.9
Q ss_pred ccccccccceeEeeeeccCCcEEEEEEEEeC------CceEEEEEEecccCCHHHHHHHHHHHHHHHhC-CCCceeeEec
Q 003963 498 LDYEILWEDLTIGEQIGQGSCGTVYHAVWYG------SQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRL-RHPNVLLFMG 570 (783)
Q Consensus 498 ~~~e~~~~~y~i~~~LG~G~fG~Vy~a~~~~------~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l-~HpnIv~l~~ 570 (783)
..+++..++|++.+.||+|+||.||+|.+.. ++.||||++.... .......+.+|+.+++.+ +||||+++++
T Consensus 20 ~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~~hp~iv~~~~ 98 (316)
T 2xir_A 20 SKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGA-THSEHRALMSELKILIHIGHHLNVVNLLG 98 (316)
T ss_dssp HHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTC-CHHHHHHHHHHHHHHHHHCCCTTBCCEEE
T ss_pred cceecchhheeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCC-CcHHHHHHHHHHHHHHhcccCCCeeeEEE
Confidence 4556778899999999999999999998642 3579999997654 445567889999999999 6999999999
Q ss_pred eeecCC-ceEEEEEecCCCCHHHHHhhcCCc---------------chHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCC
Q 003963 571 AVTSPQ-RLCIVTEFLPRGSLFRLLQRNTTK---------------LDWRRRILMALDIARGVSYLHHCNPPIIHRDLKS 634 (783)
Q Consensus 571 ~~~~~~-~~~lV~E~~~ggsL~~~L~~~~~~---------------l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp 634 (783)
++...+ .+++||||+++++|.+++...... +++..++.++.||+.||.|||+++ |+||||||
T Consensus 99 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~--i~H~dikp 176 (316)
T 2xir_A 99 ACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRK--CIHRDLAA 176 (316)
T ss_dssp EECCTTSCCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHHHTT--CCCSCCSG
T ss_pred EEecCCCceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHHhCC--cccccCcc
Confidence 987654 589999999999999999765432 899999999999999999999998 99999999
Q ss_pred CCEEEcCCCcEEEEecCCCccccccc--ccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCCh
Q 003963 635 SNLLVDKHWTVKVGDFGLSRLKHETY--LTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELAT-EKIPWDNLNS 711 (783)
Q Consensus 635 ~NILl~~~~~vkL~DFGla~~~~~~~--~~~~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~ellt-G~~Pf~~~~~ 711 (783)
+||||+.++.+||+|||++....... .......||+.|+|||++.+..++.++|||||||++|+|++ |..||.....
T Consensus 177 ~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~ 256 (316)
T 2xir_A 177 RNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKI 256 (316)
T ss_dssp GGEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCC
T ss_pred ceEEECCCCCEEECCCccccccccCccceeccCCCcceeecCchhhccccccchhHHHHHHHHHHHHHhCCCCCCcccch
Confidence 99999999999999999997654322 12223457889999999999999999999999999999998 9999987765
Q ss_pred HHHHHHhhcccccccCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHh
Q 003963 712 MQVIGAVGFMNQRLEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYF 768 (783)
Q Consensus 712 ~~~~~~i~~~~~~~~~~~~~s~~l~~LI~~cL~~dP~~RPsa~ell~~L~~L~~~~f 768 (783)
................+..+++.+.++|.+||..||.+|||+.+++++|+.+.+...
T Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~~ 313 (316)
T 2xir_A 257 DEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQANA 313 (316)
T ss_dssp SHHHHHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHC
T ss_pred hHHHHHHhccCccCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhhhc
Confidence 443333323334566778899999999999999999999999999999999887654
No 106
>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*
Probab=100.00 E-value=1.5e-41 Score=362.50 Aligned_cols=260 Identities=27% Similarity=0.425 Sum_probs=228.2
Q ss_pred ccccceeEeeeeccCCcEEEEEEEEeC-CceEEEEEEecccC-CHHHHHHHHHHHHHHHhCCCCceeeEeceeecCCceE
Q 003963 502 ILWEDLTIGEQIGQGSCGTVYHAVWYG-SQDVAVKVFSRQEY-SDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLC 579 (783)
Q Consensus 502 ~~~~~y~i~~~LG~G~fG~Vy~a~~~~-~~~vAiK~i~~~~~-~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~ 579 (783)
...++|.+.+.||+|+||.||++.+.. ++.||+|++..... .......+.+|+.+++.++||||+++++++...+..+
T Consensus 12 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~ 91 (294)
T 2rku_A 12 RSRRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVF 91 (294)
T ss_dssp TTTEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEE
T ss_pred CcccceEEEEEEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCEEE
Confidence 445789999999999999999999865 46799999977643 3456678899999999999999999999999999999
Q ss_pred EEEEecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCcccccc
Q 003963 580 IVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHET 659 (783)
Q Consensus 580 lV~E~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~~~ 659 (783)
+||||+++++|.+++... ..+++..++.++.||+.||.|||+++ |+|+||||+|||++.++.+||+|||++......
T Consensus 92 lv~e~~~~~~L~~~~~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~--i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~ 168 (294)
T 2rku_A 92 VVLELCRRRSLLELHKRR-KALTEPEARYYLRQIVLGCQYLHRNR--VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYD 168 (294)
T ss_dssp EEEECCTTCBHHHHHHHH-CSCCHHHHHHHHHHHHHHHHHHHHTT--EECCCCCGGGEEECTTCCEEECCCTTCEECCST
T ss_pred EEEecCCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCC--ccccCCChHhEEEcCCCCEEEEeccCceecccC
Confidence 999999999999998764 46899999999999999999999998 999999999999999999999999999876544
Q ss_pred cccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhcccccccCCCCCCHHHHHHH
Q 003963 660 YLTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAAIV 739 (783)
Q Consensus 660 ~~~~~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~l~~LI 739 (783)
........||+.|+|||++.+..++.++|||||||++|+|++|..||......+....+. .....++..+++.+.+||
T Consensus 169 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~li 246 (294)
T 2rku_A 169 GERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIK--KNEYSIPKHINPVAASLI 246 (294)
T ss_dssp TCCBCCCCSCCSSCCHHHHTTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHH--TTCCCCCTTSCHHHHHHH
T ss_pred ccccccccCCCCcCCcchhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHh--hccCCCccccCHHHHHHH
Confidence 334445678999999999999999999999999999999999999999887766655543 334567788999999999
Q ss_pred HHhhhhCCCCCCCHHHHHHHHHHHHHHHhhcCc
Q 003963 740 ESCWHSDPQCRPSFQELVDKLRDLQRQYFQASR 772 (783)
Q Consensus 740 ~~cL~~dP~~RPsa~ell~~L~~L~~~~f~~~~ 772 (783)
.+||..||.+||++.++ +.|+||+...
T Consensus 247 ~~~l~~~p~~Rps~~~l------l~~~~~~~~~ 273 (294)
T 2rku_A 247 QKMLQTDPTARPTINEL------LNDEFFTSGY 273 (294)
T ss_dssp HHHTCSSGGGSCCGGGG------GGSHHHHTSC
T ss_pred HHHcccChhhCcCHHHH------hhChheecCC
Confidence 99999999999999999 6789997653
No 107
>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=3.5e-41 Score=367.45 Aligned_cols=265 Identities=31% Similarity=0.509 Sum_probs=223.7
Q ss_pred cccccccceeEeeeeccCCcEEEEEEEEeCC-----ceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEeceee
Q 003963 499 DYEILWEDLTIGEQIGQGSCGTVYHAVWYGS-----QDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVT 573 (783)
Q Consensus 499 ~~e~~~~~y~i~~~LG~G~fG~Vy~a~~~~~-----~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~ 573 (783)
..++..++|++.+.||+|+||.||+|.+... ..||||++.... .......+.+|+.+++.++||||+++++++.
T Consensus 38 ~~~i~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~ 116 (333)
T 1mqb_A 38 TTEIHPSCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGY-TEKQRVDFLGEAGIMGQFSHHNIIRLEGVIS 116 (333)
T ss_dssp CCBCCTTTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTC-CHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC
T ss_pred cccCChHHhhcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCC-CHHHHHHHHHHHHHHHhCCCCCCCcEEEEEe
Confidence 3466778999999999999999999987643 249999987543 4455667899999999999999999999999
Q ss_pred cCCceEEEEEecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCC
Q 003963 574 SPQRLCIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLS 653 (783)
Q Consensus 574 ~~~~~~lV~E~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla 653 (783)
..+.+++||||+++++|.+++......+++..++.++.||+.||.|||+++ |+||||||+||||+.++.+||+|||++
T Consensus 117 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~--ivH~Dikp~NIl~~~~~~~kl~Dfg~~ 194 (333)
T 1mqb_A 117 KYKPMMIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLANMN--YVHRDLAARNILVNSNLVCKVSDFGLS 194 (333)
T ss_dssp SSSSEEEEEECCTTEEHHHHHHHTTTCSCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCCGGGEEECTTCCEEECCCCC-
T ss_pred cCCCcEEEEeCCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCC--eeCCCCChheEEECCCCcEEECCCCcc
Confidence 999999999999999999999876677999999999999999999999998 999999999999999999999999999
Q ss_pred cccccccc---cccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCChHHHHHHhhcccccccCCC
Q 003963 654 RLKHETYL---TTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELAT-EKIPWDNLNSMQVIGAVGFMNQRLEIPK 729 (783)
Q Consensus 654 ~~~~~~~~---~~~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~~~~~ 729 (783)
........ ......+|+.|+|||++.+..++.++|||||||++|+|++ |..||...........+.. ......+.
T Consensus 195 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~~~~~~~~~-~~~~~~~~ 273 (333)
T 1mqb_A 195 RVLEDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHEVMKAIND-GFRLPTPM 273 (333)
T ss_dssp ----------------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHT-TCCCCCCT
T ss_pred hhhccccccccccCCCCccccccCchhcccCCCCchhhhHHHHHHHHHHHcCCCCCcccCCHHHHHHHHHC-CCcCCCcc
Confidence 86543321 1223346789999999999999999999999999999999 9999998888777666542 23455677
Q ss_pred CCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHH
Q 003963 730 DVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQY 767 (783)
Q Consensus 730 ~~s~~l~~LI~~cL~~dP~~RPsa~ell~~L~~L~~~~ 767 (783)
.+++.+.+||.+||..||.+||++.++++.|+++....
T Consensus 274 ~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~~~~ 311 (333)
T 1mqb_A 274 DCPSAIYQLMMQCWQQERARRPKFADIVSILDKLIRAP 311 (333)
T ss_dssp TCBHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHSG
T ss_pred cCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhcc
Confidence 89999999999999999999999999999999887653
No 108
>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...
Probab=100.00 E-value=1e-41 Score=362.08 Aligned_cols=263 Identities=27% Similarity=0.464 Sum_probs=226.9
Q ss_pred ccccceeEeeeeccCCcEEEEEEEEeC-CceEEEEEEecccCCH-HHHHHHHHHHHHHHhCCCCceeeEeceeecCCceE
Q 003963 502 ILWEDLTIGEQIGQGSCGTVYHAVWYG-SQDVAVKVFSRQEYSD-EVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLC 579 (783)
Q Consensus 502 ~~~~~y~i~~~LG~G~fG~Vy~a~~~~-~~~vAiK~i~~~~~~~-~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~ 579 (783)
...++|++.+.||+|+||.||+|.+.. ++.||||++....... .....+.+|+.+++.++||||+++++++...+.++
T Consensus 11 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 90 (284)
T 2vgo_A 11 FTIDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIY 90 (284)
T ss_dssp CCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEE
T ss_pred hhhhhceeeheecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCEeeEEEEEEcCCEEE
Confidence 445799999999999999999999865 4679999987543211 12357889999999999999999999999999999
Q ss_pred EEEEecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCcccccc
Q 003963 580 IVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHET 659 (783)
Q Consensus 580 lV~E~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~~~ 659 (783)
+||||+++++|.+++... ..+++..++.++.||+.||.|||+++ |+|+||||+|||++.++.+||+|||++......
T Consensus 91 lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~--i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~ 167 (284)
T 2vgo_A 91 LMLEFAPRGELYKELQKH-GRFDEQRSATFMEELADALHYCHERK--VIHRDIKPENLLMGYKGELKIADFGWSVHAPSL 167 (284)
T ss_dssp EEECCCTTEEHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHTTT--EECCCCSGGGEEECTTCCEEECCCTTCEECSSS
T ss_pred EEEEeCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCC--ceecCCCHHHEEEcCCCCEEEecccccccCccc
Confidence 999999999999999764 35899999999999999999999998 999999999999999999999999998655432
Q ss_pred cccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhcccccccCCCCCCHHHHHHH
Q 003963 660 YLTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAAIV 739 (783)
Q Consensus 660 ~~~~~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~l~~LI 739 (783)
......|++.|+|||++.+..++.++|||||||++|+|++|..||...........+. .....++..++..+.+||
T Consensus 168 --~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~li 243 (284)
T 2vgo_A 168 --RRRTMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIV--NVDLKFPPFLSDGSKDLI 243 (284)
T ss_dssp --CBCCCCSCGGGCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHH--TTCCCCCTTSCHHHHHHH
T ss_pred --ccccccCCCCcCCHHHhccCCCCcccchhhHHHHHHHHHHCCCCCCCCCHhHHHHHHh--ccccCCCCcCCHHHHHHH
Confidence 2335578999999999999999999999999999999999999999887776655543 344567788999999999
Q ss_pred HHhhhhCCCCCCCHHHHHHHHHHHHHHHhhcCcCCCCC
Q 003963 740 ESCWHSDPQCRPSFQELVDKLRDLQRQYFQASRSTVGD 777 (783)
Q Consensus 740 ~~cL~~dP~~RPsa~ell~~L~~L~~~~f~~~~~~~~~ 777 (783)
.+||..||.+||++.++ +.|+||+.....+.+
T Consensus 244 ~~~l~~~p~~Rps~~~l------l~h~~~~~~~~~~~p 275 (284)
T 2vgo_A 244 SKLLRYHPPQRLPLKGV------MEHPWVKANSRRVLP 275 (284)
T ss_dssp HHHSCSSGGGSCCHHHH------HTCHHHHHHCCCCCC
T ss_pred HHHhhcCHhhCCCHHHH------hhCHHHHhhccccCC
Confidence 99999999999999999 678999876655443
No 109
>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B
Probab=100.00 E-value=5.8e-42 Score=389.76 Aligned_cols=259 Identities=31% Similarity=0.569 Sum_probs=225.5
Q ss_pred ccccccccceeEeeeeccCCcEEEEEEEEeCCceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEeceeecCCc
Q 003963 498 LDYEILWEDLTIGEQIGQGSCGTVYHAVWYGSQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQR 577 (783)
Q Consensus 498 ~~~e~~~~~y~i~~~LG~G~fG~Vy~a~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~ 577 (783)
..+++..++|++.++||+|+||.||+|.+..+..||||++...... .+.+.+|+.+|+.++|||||++++++. ...
T Consensus 181 ~~~~i~~~~~~~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~~~---~~~~~~E~~~l~~l~h~~iv~l~~~~~-~~~ 256 (454)
T 1qcf_A 181 DAWEIPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMS---VEAFLAEANVMKTLQHDKLVKLHAVVT-KEP 256 (454)
T ss_dssp TCSBCCGGGEEEEEEEECCSSEEEEEEEETTTEEEEEEEECTTSBC---HHHHHHHHHHHTTCCCTTBCCEEEEEC-SSS
T ss_pred cceeechHHeEEEEEcccCCceEEEEEEECCccEEEEEEecCCCcc---HHHHHHHHHHHhhCCCCCEeeEEEEEe-CCc
Confidence 3467788999999999999999999999887888999999865543 457889999999999999999999987 567
Q ss_pred eEEEEEecCCCCHHHHHhhcC-CcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCccc
Q 003963 578 LCIVTEFLPRGSLFRLLQRNT-TKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLK 656 (783)
Q Consensus 578 ~~lV~E~~~ggsL~~~L~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~ 656 (783)
+|+|||||++|+|.+++.... ..+++..++.++.||+.||+|||+++ |+||||||+||||+.++.+||+|||+++..
T Consensus 257 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~--ivHrDlkp~Nill~~~~~~kl~DFG~a~~~ 334 (454)
T 1qcf_A 257 IYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRN--YIHRDLRAANILVSASLVCKIADFGLARVI 334 (454)
T ss_dssp CEEEECCCTTCBHHHHHHSHHHHTCCHHHHHHHHHHHHHHHHHHHHTT--CCCSSCSGGGEEECTTCCEEECSTTGGGGB
T ss_pred cEEEEeecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCC--ccCCCCCHHHEEECCCCcEEEeeCCCceEc
Confidence 899999999999999997532 35888899999999999999999998 999999999999999999999999999865
Q ss_pred ccccc-cccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCChHHHHHHhhcccccccCCCCCCHH
Q 003963 657 HETYL-TTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELAT-EKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPR 734 (783)
Q Consensus 657 ~~~~~-~~~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~ 734 (783)
..... ......+++.|+|||++.+..++.++|||||||+||||++ |..||...+..+....+.. ....+.|..++++
T Consensus 335 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t~g~~P~~~~~~~~~~~~i~~-~~~~~~~~~~~~~ 413 (454)
T 1qcf_A 335 EDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALER-GYRMPRPENCPEE 413 (454)
T ss_dssp CCHHHHTTCSSSSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHH-TCCCCCCTTSCHH
T ss_pred CCCceeccCCCcccccccCHHHhccCCCCcHHHHHhHHHHHHHHHhCCCCCCCCCCHHHHHHHHHc-CCCCCCCCCCCHH
Confidence 43321 1223346789999999998999999999999999999999 9999999888877766542 3456677889999
Q ss_pred HHHHHHHhhhhCCCCCCCHHHHHHHHHHH
Q 003963 735 WAAIVESCWHSDPQCRPSFQELVDKLRDL 763 (783)
Q Consensus 735 l~~LI~~cL~~dP~~RPsa~ell~~L~~L 763 (783)
+.+||.+||..||.+|||+.+|++.|+++
T Consensus 414 l~~li~~cl~~dp~~RPt~~~i~~~L~~~ 442 (454)
T 1qcf_A 414 LYNIMMRCWKNRPEERPTFEYIQSVLDDF 442 (454)
T ss_dssp HHHHHHHHTCSSGGGSCCHHHHHHHHHTS
T ss_pred HHHHHHHHccCChhHCcCHHHHHHHHHHH
Confidence 99999999999999999999999887654
No 110
>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}
Probab=100.00 E-value=1.2e-41 Score=374.25 Aligned_cols=255 Identities=26% Similarity=0.407 Sum_probs=214.1
Q ss_pred ccccccceeEeeeeccCCcEEEEEEEEeC-CceEEEEEEecccCCHHHHHHHHHHHHHHHhCC-----CCceeeEeceee
Q 003963 500 YEILWEDLTIGEQIGQGSCGTVYHAVWYG-SQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLR-----HPNVLLFMGAVT 573 (783)
Q Consensus 500 ~e~~~~~y~i~~~LG~G~fG~Vy~a~~~~-~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~-----HpnIv~l~~~~~ 573 (783)
.....++|++.++||+|+||.||+|.+.. ++.||||++... ......+..|+.+++.+. |||||++++++.
T Consensus 30 g~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~~~e~~~l~~l~~~~~~h~~iv~~~~~~~ 106 (360)
T 3llt_A 30 GMLLNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNI---KKYTRSAKIEADILKKIQNDDINNNNIVKYHGKFM 106 (360)
T ss_dssp TCEETTTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSC---HHHHHHHHHHHHHHHHTCCCSTTGGGBCCEEEEEE
T ss_pred ceEecCEEEEEEEEcccCCeEEEEEEECCCCeEEEEEEeccc---hhhhhhhHHHHHHHHHhcccCCCCCCeecccceee
Confidence 34567899999999999999999999854 567999998642 344567788999999996 999999999999
Q ss_pred cCCceEEEEEecCCCCHHHHHhhcC-CcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcC-----------
Q 003963 574 SPQRLCIVTEFLPRGSLFRLLQRNT-TKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDK----------- 641 (783)
Q Consensus 574 ~~~~~~lV~E~~~ggsL~~~L~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~----------- 641 (783)
..+.+|+||||+ +++|.+++.... ..+++..++.++.||+.||+|||+++ |+||||||+||||+.
T Consensus 107 ~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~--ivHrDlkp~NIll~~~~~~~~~~~~~ 183 (360)
T 3llt_A 107 YYDHMCLIFEPL-GPSLYEIITRNNYNGFHIEDIKLYCIEILKALNYLRKMS--LTHTDLKPENILLDDPYFEKSLITVR 183 (360)
T ss_dssp ETTEEEEEECCC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTT--EECSCCSGGGEEESCTTCCEEEEEEE
T ss_pred ECCeeEEEEcCC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCC--eeeCCCCcccEEEccccccccccchh
Confidence 999999999999 889999997643 35899999999999999999999998 999999999999975
Q ss_pred --------------CCcEEEEecCCCcccccccccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCC
Q 003963 642 --------------HWTVKVGDFGLSRLKHETYLTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWD 707 (783)
Q Consensus 642 --------------~~~vkL~DFGla~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~elltG~~Pf~ 707 (783)
++.+||+|||++...... .....||+.|+|||++.+..++.++|||||||++|+|++|+.||.
T Consensus 184 ~~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~ 260 (360)
T 3llt_A 184 RVTDGKKIQIYRTKSTGIKLIDFGCATFKSDY---HGSIINTRQYRAPEVILNLGWDVSSDMWSFGCVLAELYTGSLLFR 260 (360)
T ss_dssp CTTTCCEEEEEEESCCCEEECCCTTCEETTSC---CCSCCSCGGGCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSCC
T ss_pred cccccccccccccCCCCEEEEeccCceecCCC---CcCccCcccccCcHHHcCCCCCCccchHHHHHHHHHHHHCCCCCC
Confidence 789999999999764432 235578999999999999999999999999999999999999998
Q ss_pred CCChHHHHHHhhcccccc------------------------cCC--------------------CCCCHHHHHHHHHhh
Q 003963 708 NLNSMQVIGAVGFMNQRL------------------------EIP--------------------KDVDPRWAAIVESCW 743 (783)
Q Consensus 708 ~~~~~~~~~~i~~~~~~~------------------------~~~--------------------~~~s~~l~~LI~~cL 743 (783)
..+.......+....... ..+ ...++.+.+||.+||
T Consensus 261 ~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L 340 (360)
T 3llt_A 261 THEHMEHLAMMESIIQPIPKNMLYEATKTNGSKYVNKDELKLAWPENASSINSIKHVKKCLPLYKIIKHELFCDFLYSIL 340 (360)
T ss_dssp CSSHHHHHHHHHHHTCCCCHHHHHHHTTSGGGGGEETTTTEECTTTTCSCHHHHHHHHTCCCHHHHCCCHHHHHHHHHHC
T ss_pred CCcHHHHHHHHHHhcCCCCHHHHhhhhhccCccccCcccceecCcccccchhhhhhhhhcccccccchHHHHHHHHHHHh
Confidence 877666554432211100 011 112477889999999
Q ss_pred hhCCCCCCCHHHHHHHHHHHHHHHhh
Q 003963 744 HSDPQCRPSFQELVDKLRDLQRQYFQ 769 (783)
Q Consensus 744 ~~dP~~RPsa~ell~~L~~L~~~~f~ 769 (783)
+.||.+|||+.++ |+|+|||
T Consensus 341 ~~dP~~Rpta~el------L~hp~f~ 360 (360)
T 3llt_A 341 QIDPTLRPSPAEL------LKHKFLE 360 (360)
T ss_dssp CSSGGGSCCHHHH------TTSGGGC
T ss_pred cCChhhCCCHHHH------hcCcccC
Confidence 9999999999999 6889986
No 111
>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=9.3e-42 Score=379.70 Aligned_cols=260 Identities=20% Similarity=0.312 Sum_probs=207.6
Q ss_pred ccccceeEeeeeccCCcEEEEEEEEeC-CceEEEEEEecccCCHHHHHHHHHHHHHHHhCC-CCceeeEeceeecCC--c
Q 003963 502 ILWEDLTIGEQIGQGSCGTVYHAVWYG-SQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLR-HPNVLLFMGAVTSPQ--R 577 (783)
Q Consensus 502 ~~~~~y~i~~~LG~G~fG~Vy~a~~~~-~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~-HpnIv~l~~~~~~~~--~ 577 (783)
...++|++.++||+|+||.||+|.+.. ++.||||++............+.+|+.+++.+. |||||++++++...+ .
T Consensus 6 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~~~~ 85 (388)
T 3oz6_A 6 HVLRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRADNDRD 85 (388)
T ss_dssp HHHTTEEEEEC-------CEEEEEETTTCCEEEEEEECC--CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTTSSC
T ss_pred cccCceEEEEEeeeCCCeEEEEEEECCCCCEEEEEEecccccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCCCCE
Confidence 346799999999999999999999864 577999999776656666778889999999997 999999999997544 6
Q ss_pred eEEEEEecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCcccc
Q 003963 578 LCIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKH 657 (783)
Q Consensus 578 ~~lV~E~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~ 657 (783)
+|+|||||+ ++|..++... .+++..+..++.||+.||+|||+.| |+||||||+||||+.++.+||+|||+++...
T Consensus 86 ~~lv~e~~~-~~L~~~~~~~--~~~~~~~~~i~~qi~~~L~~LH~~~--ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~ 160 (388)
T 3oz6_A 86 VYLVFDYME-TDLHAVIRAN--ILEPVHKQYVVYQLIKVIKYLHSGG--LLHRDMKPSNILLNAECHVKVADFGLSRSFV 160 (388)
T ss_dssp EEEEEECCS-EEHHHHHHHT--CCCHHHHHHHHHHHHHHHHHHHHTT--EECCCCCGGGEEECTTCCEEECCCTTCEESS
T ss_pred EEEEecccC-cCHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHhCC--EEeCCCCHHHeEEcCCCCEEecCCccccccc
Confidence 899999996 5999999763 5889999999999999999999999 9999999999999999999999999997543
Q ss_pred cc---------------------cccccCCCCCCcccCcccccC-CCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHH
Q 003963 658 ET---------------------YLTTKTGKGTPQWMAPEVLRN-EPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVI 715 (783)
Q Consensus 658 ~~---------------------~~~~~~~~Gt~~Y~aPE~~~~-~~~s~~sDIwSLG~il~elltG~~Pf~~~~~~~~~ 715 (783)
.. .......+||+.|+|||++.+ ..++.++|||||||+||+|++|++||.+.+....+
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~ 240 (388)
T 3oz6_A 161 NIRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSSTMNQL 240 (388)
T ss_dssp SCCCCCCCGGGCCC---------------CCCGGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHH
T ss_pred ccccccccccccccccccccccccccccCCcccCCcCCHHHhcCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCCHHHHH
Confidence 21 111234579999999999987 67899999999999999999999999988776655
Q ss_pred HHhhccccc---------------------------------------------ccCCCCCCHHHHHHHHHhhhhCCCCC
Q 003963 716 GAVGFMNQR---------------------------------------------LEIPKDVDPRWAAIVESCWHSDPQCR 750 (783)
Q Consensus 716 ~~i~~~~~~---------------------------------------------~~~~~~~s~~l~~LI~~cL~~dP~~R 750 (783)
..+...... ...+..+++++.+||.+||..||.+|
T Consensus 241 ~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~~L~~dP~~R 320 (388)
T 3oz6_A 241 ERIIGVIDFPSNEDVESIQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKNLLLKINPKADCNEEALDLLDKLLQFNPNKR 320 (388)
T ss_dssp HHHHHHHCCCCHHHHHTSCCSSHHHHHHHHHHHCC-----CCCCHHHHHHHHHHHCTTCCCCHHHHHHHHHHCCSSGGGS
T ss_pred HHHHHhcCCCCHHHHHhccCHHHHHHHHhCcccccccCCCHHHhCcchhhhcccccccccCCHHHHHHHHHhhccCcccC
Confidence 444211110 01123678999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHHhhcCc
Q 003963 751 PSFQELVDKLRDLQRQYFQASR 772 (783)
Q Consensus 751 Psa~ell~~L~~L~~~~f~~~~ 772 (783)
||+.++ |+|+||+...
T Consensus 321 ~t~~e~------l~Hp~~~~~~ 336 (388)
T 3oz6_A 321 ISANDA------LKHPFVSIFH 336 (388)
T ss_dssp CCHHHH------TTSTTTTTTC
T ss_pred CCHHHH------hCCHHHHHhc
Confidence 999999 6899986543
No 112
>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.9e-41 Score=374.84 Aligned_cols=256 Identities=26% Similarity=0.365 Sum_probs=212.5
Q ss_pred ccceeEeeeeccCCcEEEEEEEEeC-CceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEeceeecCC------
Q 003963 504 WEDLTIGEQIGQGSCGTVYHAVWYG-SQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQ------ 576 (783)
Q Consensus 504 ~~~y~i~~~LG~G~fG~Vy~a~~~~-~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~------ 576 (783)
.++|++.+.||+|+||.||+|.+.. ++.||||++..........+.+.+|+.+|+.++||||+++++++....
T Consensus 24 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~ 103 (367)
T 1cm8_A 24 RAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFT 103 (367)
T ss_dssp BSSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCC
T ss_pred cceEEEeEEeeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCccccCc
Confidence 4789999999999999999999854 578999999776656666778999999999999999999999997653
Q ss_pred ceEEEEEecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCccc
Q 003963 577 RLCIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLK 656 (783)
Q Consensus 577 ~~~lV~E~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~ 656 (783)
.+|+||||+ +++|.+++.. ..+++..+..++.||+.||+|||++| |+||||||+||||+.++.+||+|||+++..
T Consensus 104 ~~~lv~e~~-~~~L~~~~~~--~~l~~~~~~~~~~qi~~~L~~LH~~~--ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~ 178 (367)
T 1cm8_A 104 DFYLVMPFM-GTDLGKLMKH--EKLGEDRIQFLVYQMLKGLRYIHAAG--IIHRDLKPGNLAVNEDCELKILDFGLARQA 178 (367)
T ss_dssp CCEEEEECC-SEEHHHHHHH--CCCCHHHHHHHHHHHHHHHHHHHHTT--EECCCCCGGGEEECTTCCEEECCCTTCEEC
T ss_pred eEEEEEecC-CCCHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCC--ccccCcCHHHEEEcCCCCEEEEeeeccccc
Confidence 469999999 7899999976 35899999999999999999999999 999999999999999999999999999865
Q ss_pred ccccccccCCCCCCcccCcccccC-CCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhcccc------------
Q 003963 657 HETYLTTKTGKGTPQWMAPEVLRN-EPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQ------------ 723 (783)
Q Consensus 657 ~~~~~~~~~~~Gt~~Y~aPE~~~~-~~~s~~sDIwSLG~il~elltG~~Pf~~~~~~~~~~~i~~~~~------------ 723 (783)
... ....+||+.|+|||++.+ ..++.++|||||||++|+|++|++||.+.+....+..+.....
T Consensus 179 ~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~~~~~~~~~~~~ 255 (367)
T 1cm8_A 179 DSE---MTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQS 255 (367)
T ss_dssp CSS---CCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHTCSC
T ss_pred ccc---cCcCcCCCCcCCHHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhhh
Confidence 432 234578999999999887 6789999999999999999999999998876655444321110
Q ss_pred -----------------cccCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhcCcC
Q 003963 724 -----------------RLEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQASRS 773 (783)
Q Consensus 724 -----------------~~~~~~~~s~~l~~LI~~cL~~dP~~RPsa~ell~~L~~L~~~~f~~~~~ 773 (783)
...+...+++.+.+||.+||..||.+|||+.++ |.|+||+....
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~mL~~dP~~R~t~~e~------l~hp~f~~~~~ 316 (367)
T 1cm8_A 256 DEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEA------LAHPYFESLHD 316 (367)
T ss_dssp HHHHHHHHHSCCCCCCCGGGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHH------HHSGGGTTTC-
T ss_pred HHHHHHHHhCCCCCCCCHHHHCCCCCHHHHHHHHHHccCChhHCCCHHHH------hcChHHHhhcC
Confidence 112345678999999999999999999999999 67999987543
No 113
>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A
Probab=100.00 E-value=7.8e-42 Score=363.22 Aligned_cols=265 Identities=25% Similarity=0.358 Sum_probs=206.6
Q ss_pred ccccccceeEeeeeccCCcEEEEEEEEe-CCceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEeceeecCCce
Q 003963 500 YEILWEDLTIGEQIGQGSCGTVYHAVWY-GSQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRL 578 (783)
Q Consensus 500 ~e~~~~~y~i~~~LG~G~fG~Vy~a~~~-~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~ 578 (783)
+++..++|++.+.||+|+||.||+|.+. .++.||||++............+.++..+++.++||||+++++++...+..
T Consensus 2 ~~i~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~~~~~ 81 (290)
T 3fme_A 2 MEVKADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDV 81 (290)
T ss_dssp CCCCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEC---CHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSSE
T ss_pred CcccHHhhhhHHhcCCCCCeEEEEEEecCCCeEEEEEEeecccCcHHHHHHHHHHHHHHHhCCCCeEEEEeeeeeccCCE
Confidence 3566789999999999999999999985 457799999976654445555566666678889999999999999999999
Q ss_pred EEEEEecCCCCHHHHHhh---cCCcchHHHHHHHHHHHHHHHHHHHhC-CCCEEecCCCCCCEEEcCCCcEEEEecCCCc
Q 003963 579 CIVTEFLPRGSLFRLLQR---NTTKLDWRRRILMALDIARGVSYLHHC-NPPIIHRDLKSSNLLVDKHWTVKVGDFGLSR 654 (783)
Q Consensus 579 ~lV~E~~~ggsL~~~L~~---~~~~l~~~~~~~i~~qi~~aL~~LH~~-~~~IvHrDIKp~NILl~~~~~vkL~DFGla~ 654 (783)
++||||++ ++|.+++.. ....+++..++.++.||+.||.|||++ + |+||||||+|||++.++.+||+|||++.
T Consensus 82 ~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~--i~H~dlkp~Nil~~~~~~~kl~Dfg~~~ 158 (290)
T 3fme_A 82 WICMELMD-TSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLS--VIHRDVKPSNVLINALGQVKMCDFGISG 158 (290)
T ss_dssp EEEEECCS-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHSC--CCCCCCSGGGCEECTTCCEEBCCC----
T ss_pred EEEEehhc-cchHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcCC--eecCCCCHHHEEECCCCCEEEeecCCcc
Confidence 99999996 488887753 456799999999999999999999997 8 9999999999999999999999999997
Q ss_pred ccccccccccCCCCCCcccCcccc----cCCCCCchhHHHHHHHHHHHHHcCCCCCCCCC-hHHHHHHhhcccccccCCC
Q 003963 655 LKHETYLTTKTGKGTPQWMAPEVL----RNEPSDEKSDVYSFGVILWELATEKIPWDNLN-SMQVIGAVGFMNQRLEIPK 729 (783)
Q Consensus 655 ~~~~~~~~~~~~~Gt~~Y~aPE~~----~~~~~s~~sDIwSLG~il~elltG~~Pf~~~~-~~~~~~~i~~~~~~~~~~~ 729 (783)
...... ......||+.|+|||++ .+..++.++|||||||++|+|++|..||.... .................+.
T Consensus 159 ~~~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (290)
T 3fme_A 159 YLVDDV-AKDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVEEPSPQLPAD 237 (290)
T ss_dssp ------------CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTSCSSCCCSCHHHHHHHHHHSCCCCCCTT
T ss_pred cccccc-cccccCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCCCCccccCchHHHHHHHhccCCCCcccc
Confidence 655432 22344789999999996 56678899999999999999999999998643 3333333322222333345
Q ss_pred CCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhcCcCC
Q 003963 730 DVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQASRST 774 (783)
Q Consensus 730 ~~s~~l~~LI~~cL~~dP~~RPsa~ell~~L~~L~~~~f~~~~~~ 774 (783)
.+++++.+||.+||+.||.+|||+.++ ++|+||+...+.
T Consensus 238 ~~~~~~~~li~~~l~~~p~~Rpt~~e~------l~hp~f~~~~~~ 276 (290)
T 3fme_A 238 KFSAEFVDFTSQCLKKNSKERPTYPEL------MQHPFFTLHESK 276 (290)
T ss_dssp TSCHHHHHHHHHHTCSSGGGSCCHHHH------TTSHHHHHHHHS
T ss_pred cCCHHHHHHHHHHhhcChhhCcCHHHH------HhCcccccCccc
Confidence 789999999999999999999999999 679999876554
No 114
>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*
Probab=100.00 E-value=2.5e-41 Score=358.44 Aligned_cols=262 Identities=32% Similarity=0.564 Sum_probs=222.2
Q ss_pred ccccccceeEeeeeccCCcEEEEEEEEeCC----ceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEeceeecC
Q 003963 500 YEILWEDLTIGEQIGQGSCGTVYHAVWYGS----QDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSP 575 (783)
Q Consensus 500 ~e~~~~~y~i~~~LG~G~fG~Vy~a~~~~~----~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~ 575 (783)
+.+..++|++.+.||+|+||.||+|.+... ..||+|++.... .....+.+.+|+.+++.++||||+++++++..
T Consensus 7 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~- 84 (281)
T 3cc6_A 7 YGIAREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDC-TLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEE- 84 (281)
T ss_dssp CSCCGGGEEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTS-CHHHHHHHHHHHHHHHHHCCTTBCCEEEEECS-
T ss_pred ceecccceEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEeccccc-CchHHHHHHHHHHHHHhCCCCCcceEEEEEcC-
Confidence 455668999999999999999999987643 249999987653 34556789999999999999999999999875
Q ss_pred CceEEEEEecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCcc
Q 003963 576 QRLCIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRL 655 (783)
Q Consensus 576 ~~~~lV~E~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~ 655 (783)
+..++||||+++++|.+++......+++..++.++.||+.||.|||+++ |+||||||+|||++.++.+||+|||++..
T Consensus 85 ~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~--i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~ 162 (281)
T 3cc6_A 85 EPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLESIN--CVHRDIAVRNILVASPECVKLGDFGLSRY 162 (281)
T ss_dssp SSCEEEEECCTTCBHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHTT--CCCCCCSGGGEEEEETTEEEECCCCGGGC
T ss_pred CCCEEEEecCCCCCHHHHHHhccccCCHHHHHHHHHHHHHHHHHHHHCC--cccCCCccceEEECCCCcEEeCccCCCcc
Confidence 4578999999999999999877777999999999999999999999998 99999999999999999999999999876
Q ss_pred cccccc-cccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCChHHHHHHhhcccccccCCCCCCH
Q 003963 656 KHETYL-TTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELAT-EKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDP 733 (783)
Q Consensus 656 ~~~~~~-~~~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~ 733 (783)
...... ......+++.|+|||++.+..++.++|||||||++|+|++ |+.||...........+. .......+..+++
T Consensus 163 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~llt~g~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 241 (281)
T 3cc6_A 163 IEDEDYYKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDVIGVLE-KGDRLPKPDLCPP 241 (281)
T ss_dssp C---------CCCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCGGGHHHHHH-HTCCCCCCTTCCH
T ss_pred cccccccccccCCCCcceeCchhhccCCCCchhccHHHHHHHHHHHhCCCCCcccCChHHHHHHHh-cCCCCCCCCCCCH
Confidence 544321 2233457889999999999999999999999999999998 999998777666554443 2334566778999
Q ss_pred HHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHH
Q 003963 734 RWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQ 766 (783)
Q Consensus 734 ~l~~LI~~cL~~dP~~RPsa~ell~~L~~L~~~ 766 (783)
.+.+||.+||..||.+||++.++++.|+++...
T Consensus 242 ~l~~li~~~l~~~p~~Rps~~ell~~L~~~~~~ 274 (281)
T 3cc6_A 242 VLYTLMTRCWDYDPSDRPRFTELVCSLSDVYQM 274 (281)
T ss_dssp HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHccCCchhCcCHHHHHHHHHHHHHh
Confidence 999999999999999999999999999988654
No 115
>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...
Probab=100.00 E-value=9.9e-42 Score=362.37 Aligned_cols=264 Identities=33% Similarity=0.580 Sum_probs=229.1
Q ss_pred cccccccccceeEeeeeccCCcEEEEEEEEeC-CceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEeceeecC
Q 003963 497 CLDYEILWEDLTIGEQIGQGSCGTVYHAVWYG-SQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSP 575 (783)
Q Consensus 497 ~~~~e~~~~~y~i~~~LG~G~fG~Vy~a~~~~-~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~ 575 (783)
...|++..++|++.++||+|+||.||+|.+.. +..||+|++..... ..+.+.+|+.+++.++||||+++++++...
T Consensus 5 ~~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~---~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~ 81 (288)
T 3kfa_A 5 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM---EVEEFLKEAAVMKEIKHPNLVQLLGVCTRE 81 (288)
T ss_dssp CCTTBCCGGGEEEEEESGGGTTCSEEEEEEGGGTEEEEEEEECSCST---HHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred hhcccccccceeEEeecCCCCceeEEEeEecCCCEEEEEEecCcCHH---HHHHHHHHHHHHHhCCCCCEeeEEEEEccC
Confidence 34677888999999999999999999999875 56799999875432 346788999999999999999999999999
Q ss_pred CceEEEEEecCCCCHHHHHhhc-CCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCc
Q 003963 576 QRLCIVTEFLPRGSLFRLLQRN-TTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSR 654 (783)
Q Consensus 576 ~~~~lV~E~~~ggsL~~~L~~~-~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~ 654 (783)
..+++||||+++++|.+++... ...+++..++.++.||+.||.|||+++ |+|+||||+|||++.++.+||+|||++.
T Consensus 82 ~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~--i~H~dikp~Nil~~~~~~~~l~Dfg~~~ 159 (288)
T 3kfa_A 82 PPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKN--FIHRDLAARNCLVGENHLVKVADFGLSR 159 (288)
T ss_dssp SSEEEEEECCTTEEHHHHHHHCCTTTSCHHHHHHHHHHHHHHHHHHHHHT--CCCSCCSGGGEEECGGGCEEECCCCGGG
T ss_pred CCEEEEEEcCCCCcHHHHHHhcccCCccHhHHHHHHHHHHHHHHHHHHCC--ccCCCCCcceEEEcCCCCEEEccCccce
Confidence 9999999999999999999763 345899999999999999999999999 9999999999999999999999999997
Q ss_pred ccccccc-cccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCChHHHHHHhhcccccccCCCCCC
Q 003963 655 LKHETYL-TTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELAT-EKIPWDNLNSMQVIGAVGFMNQRLEIPKDVD 732 (783)
Q Consensus 655 ~~~~~~~-~~~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s 732 (783)
....... ......+++.|+|||++.+..++.++|||||||++|+|++ |..||...+.......+. .......+..++
T Consensus 160 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~~g~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~ 238 (288)
T 3kfa_A 160 LMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLE-KDYRMERPEGCP 238 (288)
T ss_dssp TSCSSSSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHHH-TTCCCCCCTTCC
T ss_pred eccCCccccccCCccccCcCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHh-ccCCCCCCCCCC
Confidence 6554322 2223346788999999999999999999999999999999 999999888776665553 233556678899
Q ss_pred HHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHH
Q 003963 733 PRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQ 766 (783)
Q Consensus 733 ~~l~~LI~~cL~~dP~~RPsa~ell~~L~~L~~~ 766 (783)
+.+.+||.+||..||.+|||+.++++.|+.+...
T Consensus 239 ~~l~~li~~~l~~dp~~Rps~~~~~~~l~~~~~~ 272 (288)
T 3kfa_A 239 EKVYELMRACWQWNPSDRPSFAEIHQAFETMFQE 272 (288)
T ss_dssp HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCChhhCcCHHHHHHHHHHHHHh
Confidence 9999999999999999999999999999887654
No 116
>3an0_A Dual specificity mitogen-activated protein kinase; auto inhibition state, activation helix, serine/threonine-PR kinase; HET: ANK; 2.60A {Homo sapiens} PDB: 3vn9_A*
Probab=100.00 E-value=6.8e-42 Score=373.20 Aligned_cols=268 Identities=25% Similarity=0.386 Sum_probs=217.0
Q ss_pred cccccccceeEeeeeccCCcEEEEEEEEe-CCceEEEEEEecccCCHHHHHHHHHHHHH-HHhCCCCceeeEeceeecCC
Q 003963 499 DYEILWEDLTIGEQIGQGSCGTVYHAVWY-GSQDVAVKVFSRQEYSDEVIHSFRQEVSL-MKRLRHPNVLLFMGAVTSPQ 576 (783)
Q Consensus 499 ~~e~~~~~y~i~~~LG~G~fG~Vy~a~~~-~~~~vAiK~i~~~~~~~~~~~~~~~Ei~i-l~~l~HpnIv~l~~~~~~~~ 576 (783)
.+++..++|++++.||+|+||.||+|.+. .++.||||++......... ..+..|+.+ ++.++||||+++++++...+
T Consensus 45 ~~~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~-~~~~~e~~~~~~~~~h~~iv~~~~~~~~~~ 123 (340)
T 3an0_A 45 NFEVKADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQ-KRLLMDLDISMRTVDCPFTVTFYGALFREG 123 (340)
T ss_dssp CCCCCSSCEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCCCCHHH-HHHHHHHHHHHTTCCCTTTCCEEEEEECSS
T ss_pred ceEEehhheeEeeEecccCCEEEEEEEEcCCCCEEEEEEeccccCcHHH-HHHHHHHHHHHhhcCCCcEEEEeeEEEeCC
Confidence 45677889999999999999999999985 4577999999776554443 344445554 77889999999999999999
Q ss_pred ceEEEEEecCCCCHHHHHhh---cCCcchHHHHHHHHHHHHHHHHHHHhC-CCCEEecCCCCCCEEEcCCCcEEEEecCC
Q 003963 577 RLCIVTEFLPRGSLFRLLQR---NTTKLDWRRRILMALDIARGVSYLHHC-NPPIIHRDLKSSNLLVDKHWTVKVGDFGL 652 (783)
Q Consensus 577 ~~~lV~E~~~ggsL~~~L~~---~~~~l~~~~~~~i~~qi~~aL~~LH~~-~~~IvHrDIKp~NILl~~~~~vkL~DFGl 652 (783)
.+|+||||+++ +|.+++.. ....+++..++.++.||+.||.|||+. + |+||||||+||||+.++.+||+|||+
T Consensus 124 ~~~lv~e~~~~-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~~--ivH~Dlkp~NIl~~~~~~~kl~Dfg~ 200 (340)
T 3an0_A 124 DVWICMELMDT-SLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLS--VIHRDVKPSNVLINALGQVKMCDFGI 200 (340)
T ss_dssp CEEEEECCCSE-EHHHHHHHHHHTSCCCCHHHHHHHHHHHHHHHHHHHHHTC--CCCCSCCSTTEEECSTTCEEECCCSH
T ss_pred cEEEEHHHhhC-cHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcCC--eecCCCCHHHEEECCCCCEEEeeCCC
Confidence 99999999975 99888864 456799999999999999999999986 8 99999999999999999999999999
Q ss_pred CcccccccccccCCCCCCcccCcccccC----CCCCchhHHHHHHHHHHHHHcCCCCCCCCC-hHHHHHHhhcccccccC
Q 003963 653 SRLKHETYLTTKTGKGTPQWMAPEVLRN----EPSDEKSDVYSFGVILWELATEKIPWDNLN-SMQVIGAVGFMNQRLEI 727 (783)
Q Consensus 653 a~~~~~~~~~~~~~~Gt~~Y~aPE~~~~----~~~s~~sDIwSLG~il~elltG~~Pf~~~~-~~~~~~~i~~~~~~~~~ 727 (783)
+........ .....||+.|+|||++.+ ..++.++|||||||++|+|++|..||.... ....+..+.........
T Consensus 201 ~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~ 279 (340)
T 3an0_A 201 SGYLVDSVA-KTIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVEEPSPQLP 279 (340)
T ss_dssp HHHHSCHHH-HHHSSCCCCCCCHHHHSCCTTCCSCCHHHHHHHHHHHHHHHHHTSCSSCCCSCHHHHHHHHHHSCCCCCC
T ss_pred ceecccccc-cccCCCCccccCccccccccccCCCCchhhHHHHHHHHHHHHHCCCCCccccchHHHHHHHhcCCCCCCC
Confidence 876544322 223578999999999753 468899999999999999999999998643 33333333222222222
Q ss_pred CCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhcCcCCCCC
Q 003963 728 PKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQASRSTVGD 777 (783)
Q Consensus 728 ~~~~s~~l~~LI~~cL~~dP~~RPsa~ell~~L~~L~~~~f~~~~~~~~~ 777 (783)
+..+++++.+||.+||..||.+||++.++ ++|+||+...+...+
T Consensus 280 ~~~~~~~~~~li~~~l~~dp~~Rps~~el------l~hp~f~~~~~~~~~ 323 (340)
T 3an0_A 280 ADKFSAEFVDFTSQCLKKNSKERPTYPEL------MQHPFFTLHESKGTD 323 (340)
T ss_dssp GGGSCHHHHHHHHHHTCSSGGGSCCHHHH------TTSHHHHHHTTSCCC
T ss_pred cccCCHHHHHHHHHHccCCcccCcCHHHH------hcCcCcccccccccC
Confidence 34589999999999999999999999999 679999776665443
No 117
>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*
Probab=100.00 E-value=5.8e-42 Score=371.71 Aligned_cols=260 Identities=30% Similarity=0.446 Sum_probs=209.3
Q ss_pred cccccccceeEeeeeccCCcEEEEEEEEeCCceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEeceeecCCc-
Q 003963 499 DYEILWEDLTIGEQIGQGSCGTVYHAVWYGSQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQR- 577 (783)
Q Consensus 499 ~~e~~~~~y~i~~~LG~G~fG~Vy~a~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~- 577 (783)
++.+..++|++.++||+|+||.||+|.+. ++.||||++.... .....+.+|+.+++.++|||||++++++.....
T Consensus 18 n~~~~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~ 93 (322)
T 3soc_A 18 NLYFQSMPLQLLEVKARGRFGCVWKAQLL-NEYVAVKIFPIQD---KQSWQNEYEVYSLPGMKHENILQFIGAEKRGTSV 93 (322)
T ss_dssp CEEETTEEEEEEEEEECSTTCEEEEEEET-TEEEEEEEECGGG---HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSS
T ss_pred ccccchhhchhhheecccCceEEEEEEEC-CCEEEEEEeecCc---hHHHHHHHHHHHHhcCCCCCchhhcceeccCCCC
Confidence 44556789999999999999999999876 5789999986543 233455668999999999999999999987543
Q ss_pred ---eEEEEEecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhC----------CCCEEecCCCCCCEEEcCCCc
Q 003963 578 ---LCIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHC----------NPPIIHRDLKSSNLLVDKHWT 644 (783)
Q Consensus 578 ---~~lV~E~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~----------~~~IvHrDIKp~NILl~~~~~ 644 (783)
+++|||||++|+|.+++... .+++..++.++.||+.||+|||+. + |+||||||+||||+.++.
T Consensus 94 ~~~~~lv~e~~~~g~L~~~l~~~--~~~~~~~~~i~~qi~~al~~LH~~~~~l~~~~~~~--ivH~Dlkp~Nill~~~~~ 169 (322)
T 3soc_A 94 DVDLWLITAFHEKGSLSDFLKAN--VVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPA--ISHRDIKSKNVLLKNNLT 169 (322)
T ss_dssp SEEEEEEEECCTTCBHHHHHHHC--CBCHHHHHHHHHHHHHHHHHHTCCEEEETTEEECE--EECSCCSGGGEEECTTCC
T ss_pred CceEEEEEecCCCCCHHHHHHhc--CCCHHHHHHHHHHHHHHHHHHHhhccccccccCCC--EEeCCCChHhEEECCCCe
Confidence 69999999999999999764 489999999999999999999998 7 999999999999999999
Q ss_pred EEEEecCCCcccccccc--cccCCCCCCcccCcccccCC-----CCCchhHHHHHHHHHHHHHcCCCCCCCCCh------
Q 003963 645 VKVGDFGLSRLKHETYL--TTKTGKGTPQWMAPEVLRNE-----PSDEKSDVYSFGVILWELATEKIPWDNLNS------ 711 (783)
Q Consensus 645 vkL~DFGla~~~~~~~~--~~~~~~Gt~~Y~aPE~~~~~-----~~s~~sDIwSLG~il~elltG~~Pf~~~~~------ 711 (783)
+||+|||+++....... ......||+.|+|||++.+. .++.++|||||||++|+|++|+.||.....
T Consensus 170 ~kL~DFg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~ 249 (322)
T 3soc_A 170 ACIADFGLALKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLPF 249 (322)
T ss_dssp EEECCCTTCEEECTTSCCCCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHTTBTTSSSCCCCCCCTT
T ss_pred EEEccCCcccccccccCccccccCccCccccCHhhcccccccCcCCCccchhHHHHHHHHHHHhCCCCCCCCcchhccch
Confidence 99999999976544322 22345799999999999874 345688999999999999999999965321
Q ss_pred ----------HHHHHHhhcccccccCCC-----CCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHH
Q 003963 712 ----------MQVIGAVGFMNQRLEIPK-----DVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQ 766 (783)
Q Consensus 712 ----------~~~~~~i~~~~~~~~~~~-----~~s~~l~~LI~~cL~~dP~~RPsa~ell~~L~~L~~~ 766 (783)
......+......+.++. ..++++.+||.+||+.||.+|||+.++++.|++|+..
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~~~ 319 (322)
T 3soc_A 250 EEEIGQHPSLEDMQEVVVHKKKRPVLRDYWQKHAGMAMLCETIEECWDHDAEARLSAGCVGERITQMQRL 319 (322)
T ss_dssp HHHHCSSCCHHHHHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred hhhhccCCchhhhhhhhhcccCCCCccccccccchHHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHH
Confidence 112222211122222222 1235699999999999999999999999999998754
No 118
>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*
Probab=100.00 E-value=2.8e-41 Score=360.35 Aligned_cols=260 Identities=18% Similarity=0.284 Sum_probs=219.0
Q ss_pred cccccceeEeeeeccCCcEEEEEEEEe-CCceEEEEEEecccCCHHHHHHHHHHHHHHHhC-CCCceeeEeceeecCCce
Q 003963 501 EILWEDLTIGEQIGQGSCGTVYHAVWY-GSQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRL-RHPNVLLFMGAVTSPQRL 578 (783)
Q Consensus 501 e~~~~~y~i~~~LG~G~fG~Vy~a~~~-~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l-~HpnIv~l~~~~~~~~~~ 578 (783)
....++|++.+.||+|+||.||+|.+. .++.||||++...... ..+.+|+.+++.+ +|+||+++++++......
T Consensus 6 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~----~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~ 81 (298)
T 1csn_A 6 NVVGVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSDA----PQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHN 81 (298)
T ss_dssp CEETTTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCTTS----CCHHHHHHHHHHTTTCTTCCCEEEEEEETTEE
T ss_pred cccccceEEEEEEeecCCEEEEEEEECCCCcEEEEEEeccCCcc----HHHHHHHHHHHHHhcCCCCCeEEeecCCCcee
Confidence 345678999999999999999999974 4578999998755432 3467899999999 799999999999999999
Q ss_pred EEEEEecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCc-----EEEEecCCC
Q 003963 579 CIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWT-----VKVGDFGLS 653 (783)
Q Consensus 579 ~lV~E~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~-----vkL~DFGla 653 (783)
++||||+ +++|.+++.....++++..++.++.||+.||+|||+++ |+||||||+||||+.++. +||+|||++
T Consensus 82 ~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~--ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg~~ 158 (298)
T 1csn_A 82 VLVIDLL-GPSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIHEKS--LVYRDIKPDNFLIGRPNSKNANMIYVVDFGMV 158 (298)
T ss_dssp EEEEECC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHTTT--EECCCCCGGGEEECCSSSTTTTCEEECCCTTC
T ss_pred EEEEEec-CCCHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhCC--EecCCCCHHHEEeccCCCCCCCeEEEEECccc
Confidence 9999999 89999999877667999999999999999999999998 999999999999987765 999999999
Q ss_pred cccccccc-------cccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCC---hHHHHHHhhcc--
Q 003963 654 RLKHETYL-------TTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLN---SMQVIGAVGFM-- 721 (783)
Q Consensus 654 ~~~~~~~~-------~~~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~elltG~~Pf~~~~---~~~~~~~i~~~-- 721 (783)
........ ......||+.|+|||++.+..++.++|||||||++|+|++|+.||.... .......+...
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~ 238 (298)
T 1csn_A 159 KFYRDPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEKKQ 238 (298)
T ss_dssp EESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHHHHHHHHHHHH
T ss_pred cccccccccccccccCccCCCCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHcCCCCcchhhccccHHHHHHHHhhcc
Confidence 86554321 2345579999999999999999999999999999999999999998753 33333332211
Q ss_pred -cccccCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHH
Q 003963 722 -NQRLEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQY 767 (783)
Q Consensus 722 -~~~~~~~~~~s~~l~~LI~~cL~~dP~~RPsa~ell~~L~~L~~~~ 767 (783)
.....+...+++++.+||.+||..||.+||++.+|++.|+++....
T Consensus 239 ~~~~~~~~~~~~~~l~~li~~~l~~dp~~RP~~~~l~~~l~~~~~~~ 285 (298)
T 1csn_A 239 STPLRELCAGFPEEFYKYMHYARNLAFDATPDYDYLQGLFSKVLERL 285 (298)
T ss_dssp HSCHHHHTTTSCHHHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHHHT
T ss_pred CccHHHHHhhCcHHHHHHHHHHhcCCcccCCCHHHHHHHHHHHHHhc
Confidence 1122344578999999999999999999999999999999887653
No 119
>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*
Probab=100.00 E-value=1.3e-41 Score=369.54 Aligned_cols=266 Identities=26% Similarity=0.480 Sum_probs=226.2
Q ss_pred cccccccceeEeeeeccCCcEEEEEEEEeCC------ceEEEEEEecccCCHHHHHHHHHHHHHHHhC-CCCceeeEece
Q 003963 499 DYEILWEDLTIGEQIGQGSCGTVYHAVWYGS------QDVAVKVFSRQEYSDEVIHSFRQEVSLMKRL-RHPNVLLFMGA 571 (783)
Q Consensus 499 ~~e~~~~~y~i~~~LG~G~fG~Vy~a~~~~~------~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l-~HpnIv~l~~~ 571 (783)
.+++..++|++.+.||+|+||.||+|.+... ..||+|++.... .......+.+|+.+++.+ +||||++++++
T Consensus 40 ~~~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~ 118 (333)
T 2i1m_A 40 KWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTA-HADEKEALMSELKIMSHLGQHENIVNLLGA 118 (333)
T ss_dssp GGBCCTTSEEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTC-CHHHHHHHHHHHHHHHHHCCCTTBCCEEEE
T ss_pred cccCCHHHceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhccccc-ChHHHHHHHHHHHHHHhhcCCCCeeeEEEE
Confidence 4567788999999999999999999997542 369999987654 344567889999999999 89999999999
Q ss_pred eecCCceEEEEEecCCCCHHHHHhhc-------------CCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEE
Q 003963 572 VTSPQRLCIVTEFLPRGSLFRLLQRN-------------TTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLL 638 (783)
Q Consensus 572 ~~~~~~~~lV~E~~~ggsL~~~L~~~-------------~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NIL 638 (783)
+...+.+++||||+++|+|.+++... ...+++..++.++.||+.||.|||+++ |+||||||+|||
T Consensus 119 ~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~--ivH~Dlkp~NIl 196 (333)
T 2i1m_A 119 CTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASKN--CIHRDVAARNVL 196 (333)
T ss_dssp ECSSSSCEEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHHHTT--EECSCCSGGGCE
T ss_pred EecCCceEEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHhcCC--cccCCcccceEE
Confidence 99999999999999999999999753 234789999999999999999999998 999999999999
Q ss_pred EcCCCcEEEEecCCCcccccccc--cccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCChHHHH
Q 003963 639 VDKHWTVKVGDFGLSRLKHETYL--TTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELAT-EKIPWDNLNSMQVI 715 (783)
Q Consensus 639 l~~~~~vkL~DFGla~~~~~~~~--~~~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~ellt-G~~Pf~~~~~~~~~ 715 (783)
|+.++.+||+|||++........ ......||+.|+|||++.+..++.++|||||||++|+|++ |..||.........
T Consensus 197 ~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~ 276 (333)
T 2i1m_A 197 LTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKF 276 (333)
T ss_dssp EEGGGEEEBCCCGGGCCGGGCTTSEECSSCEECGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCSSHHH
T ss_pred ECCCCeEEECccccccccccccceeecCCCCCCccccCHHHhccCCCChHHHHHHHHHHHHHHHcCCCCCCcccchhHHH
Confidence 99999999999999976543321 2223456789999999999999999999999999999998 99999877655544
Q ss_pred HHhhcccccccCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHH
Q 003963 716 GAVGFMNQRLEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQY 767 (783)
Q Consensus 716 ~~i~~~~~~~~~~~~~s~~l~~LI~~cL~~dP~~RPsa~ell~~L~~L~~~~ 767 (783)
..+.........+..+++.+.+||.+||+.||.+|||+.++++.|+++....
T Consensus 277 ~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~~~~ 328 (333)
T 2i1m_A 277 YKLVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQEQAQED 328 (333)
T ss_dssp HHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred HHHHhcCCCCCCCCCCCHHHHHHHHHHhccChhhCcCHHHHHHHHHHHHHhh
Confidence 4443334455667788999999999999999999999999999999887653
No 120
>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B
Probab=100.00 E-value=7.8e-42 Score=395.20 Aligned_cols=259 Identities=24% Similarity=0.351 Sum_probs=222.2
Q ss_pred cccceeEeeeeccCCcEEEEEEEEeC-CceEEEEEEecccCCH-HHHHHHHHHHHHHHhCCCCceeeEeceeecCCceEE
Q 003963 503 LWEDLTIGEQIGQGSCGTVYHAVWYG-SQDVAVKVFSRQEYSD-EVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCI 580 (783)
Q Consensus 503 ~~~~y~i~~~LG~G~fG~Vy~a~~~~-~~~vAiK~i~~~~~~~-~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~l 580 (783)
..++|++.++||+|+||.||+|.+.. ++.||||++.+..... .....+.+|+.+|+.++||||+++++++.....+|+
T Consensus 183 ~~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~l 262 (543)
T 3c4z_A 183 GEDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCL 262 (543)
T ss_dssp CGGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred ChhheEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCEeeEEEEEeeCCEEEE
Confidence 45789999999999999999999864 5789999997653221 224567889999999999999999999999999999
Q ss_pred EEEecCCCCHHHHHhhc---CCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCcccc
Q 003963 581 VTEFLPRGSLFRLLQRN---TTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKH 657 (783)
Q Consensus 581 V~E~~~ggsL~~~L~~~---~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~ 657 (783)
|||||+||+|.+++... ...+++..++.++.||+.||.|||+++ |+||||||+||||+.+|++||+|||+++...
T Consensus 263 VmE~~~gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH~~g--IvHrDLKP~NILl~~~g~vkL~DFGla~~~~ 340 (543)
T 3c4z_A 263 VMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRN--IIYRDLKPENVLLDDDGNVRISDLGLAVELK 340 (543)
T ss_dssp EECCCTTCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHHHTT--EECCCCCGGGEEECTTSCEEECCCTTCEECC
T ss_pred EEEeccCCCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHHHcC--CcccCCChHHEEEeCCCCEEEeecceeeecc
Confidence 99999999999999753 346899999999999999999999998 9999999999999999999999999998765
Q ss_pred cccccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCC----hHHHHHHhhcccccccCCCCCCH
Q 003963 658 ETYLTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLN----SMQVIGAVGFMNQRLEIPKDVDP 733 (783)
Q Consensus 658 ~~~~~~~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~elltG~~Pf~~~~----~~~~~~~i~~~~~~~~~~~~~s~ 733 (783)
.........+||+.|+|||++.+..++.++|||||||++|||++|.+||.... .......+ ......+|..+++
T Consensus 341 ~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~DiwSlGvilyelltG~~PF~~~~~~~~~~~~~~~i--~~~~~~~p~~~s~ 418 (543)
T 3c4z_A 341 AGQTKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRV--LEQAVTYPDKFSP 418 (543)
T ss_dssp TTCCCBCCCCSCTTTSCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCTTCCCCHHHHHHHH--HHCCCCCCTTSCH
T ss_pred CCCcccccccCCccccChhhhcCCCCChHHhcCcchHHHHHHHhCCCCCCCCccchhHHHHHHHH--hhcccCCCcccCH
Confidence 54444445689999999999999999999999999999999999999997653 23333333 2345567788999
Q ss_pred HHHHHHHHhhhhCCCCCCCH-----HHHHHHHHHHHHHHhhcC
Q 003963 734 RWAAIVESCWHSDPQCRPSF-----QELVDKLRDLQRQYFQAS 771 (783)
Q Consensus 734 ~l~~LI~~cL~~dP~~RPsa-----~ell~~L~~L~~~~f~~~ 771 (783)
.+.+||.+||.+||.+||++ .++ +.|+||+.+
T Consensus 419 ~~~~li~~lL~~dP~~R~~~~~~~a~ei------~~Hpff~~i 455 (543)
T 3c4z_A 419 ASKDFCEALLQKDPEKRLGFRDGSCDGL------RTHPLFRDI 455 (543)
T ss_dssp HHHHHHHHHSCSSGGGSCCCBTTBSHHH------HTSGGGTTC
T ss_pred HHHHHHHHhccCCHhHCCCCcccCHHHH------HcCccccCC
Confidence 99999999999999999965 677 678999764
No 121
>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*
Probab=100.00 E-value=1.7e-41 Score=358.76 Aligned_cols=256 Identities=26% Similarity=0.404 Sum_probs=220.6
Q ss_pred ccceeEeeeeccCCcEEEEEEEEeCC-ceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEeceeecCCceEEEE
Q 003963 504 WEDLTIGEQIGQGSCGTVYHAVWYGS-QDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIVT 582 (783)
Q Consensus 504 ~~~y~i~~~LG~G~fG~Vy~a~~~~~-~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lV~ 582 (783)
.++|++.++||+|+||.||+|.+... ..||+|++....... ...+.+|+.+++.++||||+++++++......++||
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~--~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 85 (277)
T 3f3z_A 8 NQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVED--VDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVM 85 (277)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCSC--HHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hhhEEeeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhccch--HHHHHHHHHHHHhCCCCCEeeEEEEEecCCeEEEEE
Confidence 46899999999999999999998764 579999987654332 357889999999999999999999999999999999
Q ss_pred EecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEE---cCCCcEEEEecCCCcccccc
Q 003963 583 EFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLV---DKHWTVKVGDFGLSRLKHET 659 (783)
Q Consensus 583 E~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl---~~~~~vkL~DFGla~~~~~~ 659 (783)
||+++++|.+++... ..+++..++.++.||+.||.|||+++ |+|+||||+|||+ +.++.+||+|||++......
T Consensus 86 e~~~~~~L~~~~~~~-~~~~~~~~~~i~~~i~~~l~~lH~~~--i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~~~~~~~ 162 (277)
T 3f3z_A 86 ELCTGGELFERVVHK-RVFRESDAARIMKDVLSAVAYCHKLN--VAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPG 162 (277)
T ss_dssp ECCCSCBHHHHHHHH-CSCCHHHHHHHHHHHHHHHHHHHHTT--EECCCCSGGGEEESSSSTTCCEEECCCTTCEECCTT
T ss_pred eccCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCC--ccCCCCCHHHEEEecCCCCCcEEEEecccceeccCc
Confidence 999999999998764 45899999999999999999999999 9999999999999 78899999999999765543
Q ss_pred cccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhcccccccCC----CCCCHHH
Q 003963 660 YLTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLEIP----KDVDPRW 735 (783)
Q Consensus 660 ~~~~~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~~----~~~s~~l 735 (783)
. ......||+.|+|||++.+. ++.++|||||||++|+|++|..||...........+.... ...+ ..+++.+
T Consensus 163 ~-~~~~~~~t~~y~aPE~~~~~-~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~ 238 (277)
T 3f3z_A 163 K-MMRTKVGTPYYVSPQVLEGL-YGPECDEWSAGVMMYVLLCGYPPFSAPTDSEVMLKIREGT--FTFPEKDWLNVSPQA 238 (277)
T ss_dssp S-CBCCCCSCTTTCCHHHHTTC-BCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCC--CCCCHHHHTTSCHHH
T ss_pred c-chhccCCCCCccChHHhccc-CCchhhehhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhCC--CCCCchhhhcCCHHH
Confidence 2 33456789999999998765 8899999999999999999999999888777666653322 2222 3689999
Q ss_pred HHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhcCcCC
Q 003963 736 AAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQASRST 774 (783)
Q Consensus 736 ~~LI~~cL~~dP~~RPsa~ell~~L~~L~~~~f~~~~~~ 774 (783)
.+||.+||+.||.+||++.++ |+|+||+...+.
T Consensus 239 ~~li~~~l~~dp~~R~s~~~~------l~h~~~~~~~~~ 271 (277)
T 3f3z_A 239 ESLIRRLLTKSPKQRITSLQA------LEHEWFEKQLSS 271 (277)
T ss_dssp HHHHHHHTCSSTTTSCCHHHH------TTSHHHHHHHCC
T ss_pred HHHHHHHccCChhhCcCHHHH------hcCHHHhccccc
Confidence 999999999999999999999 678999876544
No 122
>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*
Probab=100.00 E-value=7.2e-42 Score=372.04 Aligned_cols=261 Identities=25% Similarity=0.340 Sum_probs=216.4
Q ss_pred ccccceeEeeeeccCCcEEEEEEEEeC-CceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEeceeecCCceEE
Q 003963 502 ILWEDLTIGEQIGQGSCGTVYHAVWYG-SQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCI 580 (783)
Q Consensus 502 ~~~~~y~i~~~LG~G~fG~Vy~a~~~~-~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~l 580 (783)
...++|++.+.||+|+||.||+|.+.. ++.||||++............+.+|+.+++.++||||+++++++...+.+|+
T Consensus 22 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 101 (331)
T 4aaa_A 22 QSMEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWYL 101 (331)
T ss_dssp BCGGGEEEEEEGGGGTTSSEEEEEETTTCCEEEEEEEESCSSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEE
T ss_pred hhhhhheeeeEEeecCCEEEEEEEECCCCceEEEEEEecCCCchHHHHHHHHHHHHHhhCCCCCEeeEEEEeecCCEEEE
Confidence 345799999999999999999999865 5789999998777677777788899999999999999999999999999999
Q ss_pred EEEecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCccccccc
Q 003963 581 VTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETY 660 (783)
Q Consensus 581 V~E~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~ 660 (783)
||||+++++|.+++.. ...+++..++.++.||+.||.|||+.+ |+||||||+||||+.++.+||+|||++.......
T Consensus 102 v~e~~~~~~l~~~~~~-~~~~~~~~~~~~~~qi~~~l~~LH~~~--ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 178 (331)
T 4aaa_A 102 VFEFVDHTILDDLELF-PNGLDYQVVQKYLFQIINGIGFCHSHN--IIHRDIKPENILVSQSGVVKLCDFGFARTLAAPG 178 (331)
T ss_dssp EEECCSEEHHHHHHHS-TTCCCHHHHHHHHHHHHHHHHHHHHTT--CCCCCCCGGGEEECTTSCEEECCCTTC-------
T ss_pred EEecCCcchHHHHHhh-ccCCCHHHHHHHHHHHHHHHHHHHHCC--EEccCcChheEEEcCCCcEEEEeCCCceeecCCc
Confidence 9999998888887654 346999999999999999999999998 9999999999999999999999999998665544
Q ss_pred ccccCCCCCCcccCcccccCC-CCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhcccc----------------
Q 003963 661 LTTKTGKGTPQWMAPEVLRNE-PSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQ---------------- 723 (783)
Q Consensus 661 ~~~~~~~Gt~~Y~aPE~~~~~-~~s~~sDIwSLG~il~elltG~~Pf~~~~~~~~~~~i~~~~~---------------- 723 (783)
.......||+.|+|||++.+. .++.++|||||||++|+|++|.+||...........+.....
T Consensus 179 ~~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (331)
T 4aaa_A 179 EVYDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNLIPRHQELFNKNPVF 258 (331)
T ss_dssp -----CCCCCTTCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHHCGGG
T ss_pred cccCCCcCCccccCcccccCCCCcchHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhhhHhhhcccc
Confidence 444456789999999999875 689999999999999999999999988876655443321100
Q ss_pred -ccc------------CCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhcC
Q 003963 724 -RLE------------IPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQAS 771 (783)
Q Consensus 724 -~~~------------~~~~~s~~l~~LI~~cL~~dP~~RPsa~ell~~L~~L~~~~f~~~ 771 (783)
... ....+++.+.+||.+||..||.+|||+.++ |+|+||+..
T Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~el------l~hp~f~~~ 313 (331)
T 4aaa_A 259 AGVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAEL------LHHDFFQMD 313 (331)
T ss_dssp TTCCCCCCSSCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCGGGG------GGSHHHHGG
T ss_pred ccccCccccccchhhhcccchhHHHHHHHHHHhccCcccCCCHHHH------hcCchhccC
Confidence 000 113578999999999999999999999999 678999764
No 123
>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*
Probab=100.00 E-value=7.1e-41 Score=360.12 Aligned_cols=262 Identities=23% Similarity=0.397 Sum_probs=209.6
Q ss_pred cccceeEeeeeccCCcEEEEEEEEe-CCceEEEEEEeccc-CCHHHHHHHHHHHHHHHhCCCCceeeEeceeecCCceEE
Q 003963 503 LWEDLTIGEQIGQGSCGTVYHAVWY-GSQDVAVKVFSRQE-YSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCI 580 (783)
Q Consensus 503 ~~~~y~i~~~LG~G~fG~Vy~a~~~-~~~~vAiK~i~~~~-~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~l 580 (783)
..++|++.+.||+|+||.||+|.+. .++.||||++.... ........+.+|+.+++.++||||+++++++...+.+++
T Consensus 30 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~l 109 (310)
T 2wqm_A 30 TLANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNI 109 (310)
T ss_dssp SGGGEEEEEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEE
T ss_pred cccceEEEEeecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCcEEE
Confidence 4578999999999999999999985 45789999997644 345566788999999999999999999999999999999
Q ss_pred EEEecCCCCHHHHHhh---cCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCcccc
Q 003963 581 VTEFLPRGSLFRLLQR---NTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKH 657 (783)
Q Consensus 581 V~E~~~ggsL~~~L~~---~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~ 657 (783)
||||+++++|.+++.. ....+++..++.++.||+.||.|||+++ |+|+||||+||||+.++.+||+|||++....
T Consensus 110 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~--i~H~dl~p~NIl~~~~~~~kl~Dfg~~~~~~ 187 (310)
T 2wqm_A 110 VLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSRR--VMHRDIKPANVFITATGVVKLGDLGLGRFFS 187 (310)
T ss_dssp EEECCCSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTT--CCCCCCCGGGEEECTTSCEEECCC-------
T ss_pred EEecCCCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHhhCC--eeCCCCcHHHEEEcCCCCEEEEeccceeeec
Confidence 9999999999999864 3456899999999999999999999998 9999999999999999999999999987665
Q ss_pred cccccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCC--hHHHHHHhhcccccccCCCCCCHHH
Q 003963 658 ETYLTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLN--SMQVIGAVGFMNQRLEIPKDVDPRW 735 (783)
Q Consensus 658 ~~~~~~~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~elltG~~Pf~~~~--~~~~~~~i~~~~~~~~~~~~~s~~l 735 (783)
..........|++.|+|||++.+..++.++|||||||++|+|++|..||.... .......+.........+..+++++
T Consensus 188 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 267 (310)
T 2wqm_A 188 SKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQCDYPPLPSDHYSEEL 267 (310)
T ss_dssp -----------CCSSCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTC---CCHHHHHHHHHTTCSCCCCTTTSCHHH
T ss_pred CCCccccccCCCeeEeChHHhCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchhHHHHHHHhhcccCCCCcccccCHHH
Confidence 44333445578999999999999999999999999999999999999996543 2333333332222223346789999
Q ss_pred HHHHHHhhhhCCCCCCCHHHHHHHHHHHHHH
Q 003963 736 AAIVESCWHSDPQCRPSFQELVDKLRDLQRQ 766 (783)
Q Consensus 736 ~~LI~~cL~~dP~~RPsa~ell~~L~~L~~~ 766 (783)
.+||.+||..||.+||++.++++.|++|+..
T Consensus 268 ~~li~~~l~~dp~~Rps~~~il~~l~~l~~~ 298 (310)
T 2wqm_A 268 RQLVNMCINPDPEKRPDVTYVYDVAKRMHAC 298 (310)
T ss_dssp HHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHcCCChhhCCCHHHHHHHHHHHHHh
Confidence 9999999999999999999999999998765
No 124
>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...
Probab=100.00 E-value=1.1e-41 Score=370.16 Aligned_cols=260 Identities=27% Similarity=0.508 Sum_probs=216.8
Q ss_pred ccccceeEeeeeccCCcEEEEEEEEeCC-c----eEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEeceeecCC
Q 003963 502 ILWEDLTIGEQIGQGSCGTVYHAVWYGS-Q----DVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQ 576 (783)
Q Consensus 502 ~~~~~y~i~~~LG~G~fG~Vy~a~~~~~-~----~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~ 576 (783)
...++|++.++||+|+||.||+|.+... + +||+|.+.... .......+.+|+.+++.++||||+++++++....
T Consensus 12 l~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~ 90 (327)
T 3poz_A 12 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT-SPKANKEILDEAYVMASVDNPHVCRLLGICLTST 90 (327)
T ss_dssp CCGGGEEEEEEEEEETTEEEEEEEECC----CCEEEEEEEC--------CHHHHHHHHHHHHHCCBTTBCCEEEEEESSS
T ss_pred cCHHHcccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeeccccc-CHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCC
Confidence 3457899999999999999999997543 2 35777765433 2334567889999999999999999999998754
Q ss_pred ceEEEEEecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCccc
Q 003963 577 RLCIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLK 656 (783)
Q Consensus 577 ~~~lV~E~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~ 656 (783)
.++||||+.+|+|.+++......+++..++.++.||+.||.|||+++ |+||||||+||||+.++.+||+|||+++..
T Consensus 91 -~~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~--ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~ 167 (327)
T 3poz_A 91 -VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRR--LVHRDLAARNVLVKTPQHVKITDFGLAKLL 167 (327)
T ss_dssp -EEEEEECCTTCBHHHHHHHSTTSCCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCCGGGEEEEETTEEEECCTTHHHHH
T ss_pred -eEEEEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhCC--eeCCCCChheEEECCCCCEEEccCcceeEc
Confidence 78999999999999999887778999999999999999999999998 999999999999999999999999999765
Q ss_pred ccccc--cccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCChHHHHHHhhcccccccCCCCCCH
Q 003963 657 HETYL--TTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELAT-EKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDP 733 (783)
Q Consensus 657 ~~~~~--~~~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~ 733 (783)
..... ......+|+.|+|||++.+..++.++|||||||++|+|++ |..||...+.......+. .......+..++.
T Consensus 168 ~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 246 (327)
T 3poz_A 168 GAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILE-KGERLPQPPICTI 246 (327)
T ss_dssp TTTCC-------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHH-TTCCCCCCTTBCH
T ss_pred cCCcccccccCCCccccccChHHhccCCCCchhhhhhhHHHHHHHHhcCCCCccCCCHHHHHHHHH-cCCCCCCCccCCH
Confidence 43321 2223456889999999999999999999999999999999 999999887766655543 3335566778999
Q ss_pred HHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHH
Q 003963 734 RWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQ 766 (783)
Q Consensus 734 ~l~~LI~~cL~~dP~~RPsa~ell~~L~~L~~~ 766 (783)
++.+||.+||+.||.+||++.++++.|+.+...
T Consensus 247 ~~~~li~~~l~~~p~~Rps~~ell~~l~~~~~~ 279 (327)
T 3poz_A 247 DVYMIMVKCWMIDADSRPKFRELIIEFSKMARD 279 (327)
T ss_dssp HHHHHHHHHTCSCGGGSCCHHHHHHHHHHHHTS
T ss_pred HHHHHHHHHcCCChhhCCCHHHHHHHHHHHHhh
Confidence 999999999999999999999999999988653
No 125
>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*
Probab=100.00 E-value=2e-41 Score=362.45 Aligned_cols=260 Identities=28% Similarity=0.461 Sum_probs=215.1
Q ss_pred ccccceeEeeeeccCCcEEEEEEEE-----eCCceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEeceeecC-
Q 003963 502 ILWEDLTIGEQIGQGSCGTVYHAVW-----YGSQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSP- 575 (783)
Q Consensus 502 ~~~~~y~i~~~LG~G~fG~Vy~a~~-----~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~- 575 (783)
.....|++.++||+|+||.||+|.+ ..++.||||++.... .......+.+|+.+++.++||||+++++++...
T Consensus 18 ~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~ 96 (302)
T 4e5w_A 18 FEKRFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPES-GGNHIADLKKEIEILRNLYHENIVKYKGICTEDG 96 (302)
T ss_dssp CCGGGEEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC------CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC--
T ss_pred hhhhhhhhhhccCCCCceEEEEEEEccccCccCeEEEEEEecccc-cchhHHHHHHHHHHHHhCCCCCeeeeeeEEecCC
Confidence 3356799999999999999999984 245679999987554 223346788999999999999999999999876
Q ss_pred -CceEEEEEecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCc
Q 003963 576 -QRLCIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSR 654 (783)
Q Consensus 576 -~~~~lV~E~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~ 654 (783)
..+++||||+++++|.+++......+++..++.++.||+.||+|||+++ |+||||||+|||++.++.+||+|||++.
T Consensus 97 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~--i~H~dikp~Nil~~~~~~~kl~Dfg~~~ 174 (302)
T 4e5w_A 97 GNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLGSRQ--YVHRDLAARNVLVESEHQVKIGDFGLTK 174 (302)
T ss_dssp -CCEEEEEECCTTCBHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHTT--EECSCCSGGGEEEEETTEEEECCCTTCE
T ss_pred CceEEEEEEeCCCCcHHHHHHhccccCCHHHHHHHHHHHHHHHHHhhcCC--cccCCCchheEEEcCCCCEEECcccccc
Confidence 6789999999999999999777777999999999999999999999998 9999999999999999999999999998
Q ss_pred cccccc---ccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCC--------------hHHHHHH
Q 003963 655 LKHETY---LTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLN--------------SMQVIGA 717 (783)
Q Consensus 655 ~~~~~~---~~~~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~elltG~~Pf~~~~--------------~~~~~~~ 717 (783)
...... .......||..|+|||++.+..++.++|||||||++|+|++|..||.... .......
T Consensus 175 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (302)
T 4e5w_A 175 AIETDKEYYTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSDSSPMALFLKMIGPTHGQMTVTRLVN 254 (302)
T ss_dssp ECCTTCCEEECCCCTTCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCGGGHHHHHHH
T ss_pred cccCCCcceeccCCCCCCccccCCeeecCCCCCcchhHHHHHHHHHHHHHccCCCcchhhHHhhccCCcccccCHHHHHH
Confidence 655432 22334568889999999999999999999999999999999998864221 1111111
Q ss_pred hhcccccccCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHH
Q 003963 718 VGFMNQRLEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQ 764 (783)
Q Consensus 718 i~~~~~~~~~~~~~s~~l~~LI~~cL~~dP~~RPsa~ell~~L~~L~ 764 (783)
..........+..+++.+.+||.+||..||.+|||+.++++.|+++.
T Consensus 255 ~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~ll 301 (302)
T 4e5w_A 255 TLKEGKRLPCPPNCPDEVYQLMRKCWEFQPSNRTSFQNLIEGFEALL 301 (302)
T ss_dssp HHHTTCCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHH
T ss_pred HHhccCCCCCCCCCCHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHh
Confidence 22233455677889999999999999999999999999999998874
No 126
>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}
Probab=100.00 E-value=5.8e-42 Score=370.77 Aligned_cols=256 Identities=23% Similarity=0.350 Sum_probs=205.5
Q ss_pred ccceeEeeeeccCCcEEEEEEEEe-CCceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEeceeecCC------
Q 003963 504 WEDLTIGEQIGQGSCGTVYHAVWY-GSQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQ------ 576 (783)
Q Consensus 504 ~~~y~i~~~LG~G~fG~Vy~a~~~-~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~------ 576 (783)
.++|++.++||+|+||.||+|.+. .++.||||++.... .....+.+.+|+.+|+.++|||||+++++|....
T Consensus 5 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~ 83 (332)
T 3qd2_B 5 LTDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPN-RELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEKWQE 83 (332)
T ss_dssp HHHEEEEEEEECC-CSEEEEEEETTTCCEEEEEEEECCS-TTTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCHHHH
T ss_pred hhcCceeeEecCCCCeEEEEEEEcCCCcEEEEEEeecCC-chhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccchhhh
Confidence 468999999999999999999986 46789999997654 2334577899999999999999999999885433
Q ss_pred ---------------------------------------------------ceEEEEEecCCCCHHHHHhhcCC--cchH
Q 003963 577 ---------------------------------------------------RLCIVTEFLPRGSLFRLLQRNTT--KLDW 603 (783)
Q Consensus 577 ---------------------------------------------------~~~lV~E~~~ggsL~~~L~~~~~--~l~~ 603 (783)
.+++|||||++++|.+++..... ...+
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~ 163 (332)
T 3qd2_B 84 EMDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLEDREH 163 (332)
T ss_dssp HHHC--------------------------------------------CCCEEEEEEECCCSSCHHHHHHTCCSGGGSCH
T ss_pred hhhhhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcccCccchhh
Confidence 37999999999999999976432 2456
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCccccccc------------ccccCCCCCCc
Q 003963 604 RRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETY------------LTTKTGKGTPQ 671 (783)
Q Consensus 604 ~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~------------~~~~~~~Gt~~ 671 (783)
..++.++.||+.||+|||+++ |+||||||+||||+.++.+||+|||++....... .......||+.
T Consensus 164 ~~~~~i~~qi~~aL~~LH~~~--ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~ 241 (332)
T 3qd2_B 164 GVCLHIFIQIAEAVEFLHSKG--LMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGTKL 241 (332)
T ss_dssp HHHHHHHHHHHHHHHHHHHTT--EECCCCCGGGEEECTTCCEEECCCTTCEECSCC--------------CCCSCC-CGG
T ss_pred HHHHHHHHHHHHHHHHHHhCC--eeecCCCcccEEEeCCCCEEEeecCcccccccchhhccccccccccccccccCCCcC
Confidence 678899999999999999998 9999999999999999999999999998665432 12234579999
Q ss_pred ccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhcccccccCCCCCCHHHHHHHHHhhhhCCCCCC
Q 003963 672 WMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAAIVESCWHSDPQCRP 751 (783)
Q Consensus 672 Y~aPE~~~~~~~s~~sDIwSLG~il~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~l~~LI~~cL~~dP~~RP 751 (783)
|+|||++.+..++.++|||||||++|+|++|..|+... ......+. .......+...++++.+||.+||+.||.+||
T Consensus 242 y~aPE~~~~~~~~~~~Di~slG~il~el~~~~~~~~~~--~~~~~~~~-~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp 318 (332)
T 3qd2_B 242 YMSPEQIHGNNYSHKVDIFSLGLILFELLYSFSTQMER--VRIITDVR-NLKFPLLFTQKYPQEHMMVQDMLSPSPTERP 318 (332)
T ss_dssp GSCHHHHHCCCCCTHHHHHHHHHHHHHHHSCCCCHHHH--HHHHHHHH-TTCCCHHHHHHCHHHHHHHHHHHCSSGGGSC
T ss_pred ccChHHhcCCCCcchhhHHHHHHHHHHHHHcCCChhHH--HHHHHHhh-ccCCCcccccCChhHHHHHHHHccCCCCcCC
Confidence 99999999999999999999999999999997765321 11111111 1111112234567889999999999999999
Q ss_pred CHHHHHHHHHHHHHHHhhcC
Q 003963 752 SFQELVDKLRDLQRQYFQAS 771 (783)
Q Consensus 752 sa~ell~~L~~L~~~~f~~~ 771 (783)
|+.++ ++|+||+..
T Consensus 319 s~~~~------l~~~~f~~~ 332 (332)
T 3qd2_B 319 EATDI------IENAIFENL 332 (332)
T ss_dssp CHHHH------HHSTTCCCC
T ss_pred CHHHH------hhchhhhcC
Confidence 99999 688999763
No 127
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*
Probab=100.00 E-value=9.8e-42 Score=391.12 Aligned_cols=261 Identities=28% Similarity=0.434 Sum_probs=222.1
Q ss_pred cccceeEeeeeccCCcEEEEEEEEe-CCceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEeceeecCCceEEE
Q 003963 503 LWEDLTIGEQIGQGSCGTVYHAVWY-GSQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIV 581 (783)
Q Consensus 503 ~~~~y~i~~~LG~G~fG~Vy~a~~~-~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lV 581 (783)
..++|++.++||+|+||.||+|.+. .++.||||++............+.+|+.+|+.++|||||++++++.....+|+|
T Consensus 20 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv 99 (486)
T 3mwu_A 20 FAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIV 99 (486)
T ss_dssp HHHHEEEEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred hhcceEEeEEEeecCCEEEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHHHhCCCCCcCeEEEEEEcCCEEEEE
Confidence 3478999999999999999999986 457899999975433222346788999999999999999999999999999999
Q ss_pred EEecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEc---CCCcEEEEecCCCccccc
Q 003963 582 TEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVD---KHWTVKVGDFGLSRLKHE 658 (783)
Q Consensus 582 ~E~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~---~~~~vkL~DFGla~~~~~ 658 (783)
||||.+++|.+++... ..+++..++.++.||+.||.|||+++ |+||||||+||||+ .++.+||+|||++.....
T Consensus 100 ~e~~~~~~L~~~~~~~-~~~~~~~~~~i~~qi~~al~~lH~~~--ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~ 176 (486)
T 3mwu_A 100 GELYTGGELFDEIIKR-KRFSEHDAARIIKQVFSGITYMHKHN--IVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQ 176 (486)
T ss_dssp ECCCCSCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCSGGGEEESSSSTTCCEEECSCSCTTTBCC
T ss_pred EEcCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCC--eEeccCchHHEEEecCCCCCCEEEEECCcCeECCC
Confidence 9999999999998764 46899999999999999999999999 99999999999995 456799999999976554
Q ss_pred ccccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccccccc--CCCCCCHHHH
Q 003963 659 TYLTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLE--IPKDVDPRWA 736 (783)
Q Consensus 659 ~~~~~~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~elltG~~Pf~~~~~~~~~~~i~~~~~~~~--~~~~~s~~l~ 736 (783)
.. .....+||+.|+|||++.+. ++.++|||||||++|+|++|.+||...+....+..+........ .+..+++++.
T Consensus 177 ~~-~~~~~~gt~~y~aPE~~~~~-~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~ 254 (486)
T 3mwu_A 177 NT-KMKDRIGTAYYIAPEVLRGT-YDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWRTISDDAK 254 (486)
T ss_dssp C-----CCTTGGGGCCGGGGGSC-CCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCSCSGGGGGSCHHHH
T ss_pred CC-ccCCCcCCCCCCCHHHhCCC-CCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCCcccCCCCHHHH
Confidence 32 23356799999999999874 89999999999999999999999999888887777654433332 2356899999
Q ss_pred HHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhcCcCC
Q 003963 737 AIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQASRST 774 (783)
Q Consensus 737 ~LI~~cL~~dP~~RPsa~ell~~L~~L~~~~f~~~~~~ 774 (783)
+||.+||..||.+|||+.++ |+|+||+...+.
T Consensus 255 ~li~~~L~~dp~~R~t~~~~------l~hp~~~~~~~~ 286 (486)
T 3mwu_A 255 DLIRKMLTFHPSLRITATQC------LEHPWIQKYSSE 286 (486)
T ss_dssp HHHHHHTCSSTTTSCCHHHH------HHCHHHHHTCCC
T ss_pred HHHHHHcCCChhhCcCHHHH------hcCHhhccCccc
Confidence 99999999999999999999 678999876554
No 128
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=100.00 E-value=7.8e-42 Score=406.54 Aligned_cols=260 Identities=24% Similarity=0.408 Sum_probs=226.5
Q ss_pred cccccceeEeeeeccCCcEEEEEEEEeCC-ceEEEEEEecccC-CHHHHHHHHHHHHHHHhC-CCCceeeEeceeecCCc
Q 003963 501 EILWEDLTIGEQIGQGSCGTVYHAVWYGS-QDVAVKVFSRQEY-SDEVIHSFRQEVSLMKRL-RHPNVLLFMGAVTSPQR 577 (783)
Q Consensus 501 e~~~~~y~i~~~LG~G~fG~Vy~a~~~~~-~~vAiK~i~~~~~-~~~~~~~~~~Ei~il~~l-~HpnIv~l~~~~~~~~~ 577 (783)
.+..++|+++++||+|+||.||+|.+... +.||||++.+... .......+..|..++..+ +||||+++++++...+.
T Consensus 337 ~~~~~~f~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~~~ 416 (674)
T 3pfq_A 337 RMKLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDR 416 (674)
T ss_dssp ---CTTEEEEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBCSSE
T ss_pred cccccceEEEEEEccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEeCCE
Confidence 45568999999999999999999998764 5699999976432 112335677899999987 69999999999999999
Q ss_pred eEEEEEecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCcccc
Q 003963 578 LCIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKH 657 (783)
Q Consensus 578 ~~lV~E~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~ 657 (783)
+||||||++||+|..++... ..+++..++.++.||+.||+|||+++ ||||||||+||||+.++++||+|||+++...
T Consensus 417 ~~lV~E~~~gg~L~~~l~~~-~~~~~~~~~~~~~qi~~aL~~LH~~g--IiHrDLKp~NILl~~~g~ikL~DFGla~~~~ 493 (674)
T 3pfq_A 417 LYFVMEYVNGGDLMYHIQQV-GRFKEPHAVFYAAEIAIGLFFLQSKG--IIYRDLKLDNVMLDSEGHIKIADFGMCKENI 493 (674)
T ss_dssp EEEEEECCCSCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHHTS--EECCCCCSTTEEECSSSCEEECCCTTCEECC
T ss_pred EEEEEeCcCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCC--eEeccCChhhEEEcCCCcEEEeecceeeccc
Confidence 99999999999999999864 46999999999999999999999998 9999999999999999999999999998654
Q ss_pred cccccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhcccccccCCCCCCHHHHH
Q 003963 658 ETYLTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAA 737 (783)
Q Consensus 658 ~~~~~~~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~l~~ 737 (783)
.........+||+.|+|||++.+..++.++|||||||+||||++|.+||...+..+.+..+. .....+|..+++++.+
T Consensus 494 ~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~DvwSlGvilyelltG~~Pf~~~~~~~~~~~i~--~~~~~~p~~~s~~~~~ 571 (674)
T 3pfq_A 494 WDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIM--EHNVAYPKSMSKEAVA 571 (674)
T ss_dssp CTTCCBCCCCSCSSSCCHHHHTCCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHH--SSCCCCCTTSCHHHHH
T ss_pred cCCcccccccCCCcccCHhhhcCCCCCccceEechHHHHHHHHcCCCCCCCCCHHHHHHHHH--hCCCCCCccCCHHHHH
Confidence 44445567789999999999999999999999999999999999999999998888877763 4456778899999999
Q ss_pred HHHHhhhhCCCCCCCH-----HHHHHHHHHHHHHHhhcC
Q 003963 738 IVESCWHSDPQCRPSF-----QELVDKLRDLQRQYFQAS 771 (783)
Q Consensus 738 LI~~cL~~dP~~RPsa-----~ell~~L~~L~~~~f~~~ 771 (783)
||.+||++||.+||++ .+| +.|+||+.+
T Consensus 572 li~~lL~~dP~~R~~~~~~~~~ei------~~h~ff~~i 604 (674)
T 3pfq_A 572 ICKGLMTKHPGKRLGCGPEGERDI------KEHAFFRYI 604 (674)
T ss_dssp HHHHHSCSSSTTCTTCSTTHHHHH------HSSGGGSSC
T ss_pred HHHHHccCCHHHCCCCCCCcHHHH------hcCccccCC
Confidence 9999999999999987 677 678999764
No 129
>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*
Probab=100.00 E-value=1.3e-41 Score=369.86 Aligned_cols=257 Identities=18% Similarity=0.272 Sum_probs=214.6
Q ss_pred cccceeEeeeeccCCcEEEEEEEEe-CCceEEEEEEecccCCHHHHHHHHHHHHHHHhC-CCCceeeEeceeecCCceEE
Q 003963 503 LWEDLTIGEQIGQGSCGTVYHAVWY-GSQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRL-RHPNVLLFMGAVTSPQRLCI 580 (783)
Q Consensus 503 ~~~~y~i~~~LG~G~fG~Vy~a~~~-~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l-~HpnIv~l~~~~~~~~~~~l 580 (783)
..++|++.+.||+|+||.||+|.+. .++.||||++...... ..+.+|+.+++.+ +||||+++++++...+..++
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~----~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~l 82 (330)
T 2izr_A 7 VGPNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSRA----PQLHLEYRFYKQLGSGDGIPQVYYFGPCGKYNAM 82 (330)
T ss_dssp ETTTEEEEEECCC-CTTSEEEEEETTTTEEEEEEEEETTCSS----CCHHHHHHHHHHHCSCTTSCCEEEEEEETTEEEE
T ss_pred EcCCeEEEEEeeccCCceEEEEEECCCCcEEEEEEeccccch----HHHHHHHHHHHHhhCCCCCCEEEEEEecCCccEE
Confidence 4578999999999999999999975 4577999998765432 2467899999999 89999999999999999999
Q ss_pred EEEecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCc-----EEEEecCCCcc
Q 003963 581 VTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWT-----VKVGDFGLSRL 655 (783)
Q Consensus 581 V~E~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~-----vkL~DFGla~~ 655 (783)
||||+ +++|.+++......+++..++.++.||+.||+|||+++ |+||||||+||||+.++. +||+|||+++.
T Consensus 83 v~e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~--iiHrDlkp~Nill~~~~~~~~~~~kl~DFg~a~~ 159 (330)
T 2izr_A 83 VLELL-GPSLEDLFDLCDRTFSLKTVLMIAIQLISRMEYVHSKN--LIYRDVKPENFLIGRPGNKTQQVIHIIDFALAKE 159 (330)
T ss_dssp EEECC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTT--EECCCCCGGGEEECCGGGTCTTSEEECCCTTCEE
T ss_pred EEEeC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCC--eeccCCCHHHeeeccCCCCCCceEEEEEccccee
Confidence 99999 89999999876677999999999999999999999998 999999999999998887 99999999986
Q ss_pred cccccc-------cccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChH---HHHHHhhccccc-
Q 003963 656 KHETYL-------TTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSM---QVIGAVGFMNQR- 724 (783)
Q Consensus 656 ~~~~~~-------~~~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~elltG~~Pf~~~~~~---~~~~~i~~~~~~- 724 (783)
...... ......||+.|+|||++.+..++.++|||||||++|+|++|..||...... ..+..+......
T Consensus 160 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~Pf~~~~~~~~~~~~~~i~~~~~~~ 239 (330)
T 2izr_A 160 YIDPETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKADTLKERYQKIGDTKRAT 239 (330)
T ss_dssp SBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCSSHHHHHHHHHHHHHHS
T ss_pred eecCCCCccccccccCCcCCCccccChHHHcCCCCCchhHHHHHHHHHHHHhcCCCCccccccccHHHHHHHHHhhhccC
Confidence 543321 124567999999999999999999999999999999999999999875433 222222111111
Q ss_pred --ccCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHH
Q 003963 725 --LEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQY 767 (783)
Q Consensus 725 --~~~~~~~s~~l~~LI~~cL~~dP~~RPsa~ell~~L~~L~~~~ 767 (783)
......++ ++.+||..||..||.+||++.+|++.|+++....
T Consensus 240 ~~~~~~~~~p-~~~~li~~~l~~~p~~RP~~~~l~~~l~~~~~~~ 283 (330)
T 2izr_A 240 PIEVLCENFP-EMATYLRYVRRLDFFEKPDYDYLRKLFTDLFDRK 283 (330)
T ss_dssp CHHHHTTTCH-HHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHHHT
T ss_pred CHHHHhccCh-HHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHc
Confidence 11123355 9999999999999999999999999998887653
No 130
>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*
Probab=100.00 E-value=5.2e-41 Score=358.15 Aligned_cols=262 Identities=26% Similarity=0.471 Sum_probs=221.4
Q ss_pred cccccceeEee-eeccCCcEEEEEEEEeC---CceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEeceeecCC
Q 003963 501 EILWEDLTIGE-QIGQGSCGTVYHAVWYG---SQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQ 576 (783)
Q Consensus 501 e~~~~~y~i~~-~LG~G~fG~Vy~a~~~~---~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~ 576 (783)
.+..++|++.+ .||+|+||.||+|.+.. ++.||||++..........+.+.+|+.+++.++||||+++++++ ..+
T Consensus 12 ~~~~~~y~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-~~~ 90 (291)
T 1xbb_A 12 YLDRKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC-EAE 90 (291)
T ss_dssp BCCGGGEEEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEE-ESS
T ss_pred eecchhhhhccCccccccCeeeEeeeecCCCceeeEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEE-CCC
Confidence 44567899998 99999999999997643 35799999987655556677899999999999999999999999 567
Q ss_pred ceEEEEEecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCccc
Q 003963 577 RLCIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLK 656 (783)
Q Consensus 577 ~~~lV~E~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~ 656 (783)
.+++||||+++++|.+++... ..+++..++.++.||+.||.|||+++ |+|+||||+|||++.++.+||+|||++...
T Consensus 91 ~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~LH~~~--i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~ 167 (291)
T 1xbb_A 91 SWMLVMEMAELGPLNKYLQQN-RHVKDKNIIELVHQVSMGMKYLEESN--FVHRDLAARNVLLVTQHYAKISDFGLSKAL 167 (291)
T ss_dssp SEEEEEECCTTEEHHHHHHHC-TTCCHHHHHHHHHHHHHHHHHHHHTT--EECSCCSGGGEEEEETTEEEECCCTTCEEC
T ss_pred CcEEEEEeCCCCCHHHHHHhC-cCCCHHHHHHHHHHHHHHHHHHHhCC--eEcCCCCcceEEEeCCCcEEEccCCcceee
Confidence 789999999999999999764 45899999999999999999999998 999999999999999999999999999765
Q ss_pred ccccc---cccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCChHHHHHHhhcccccccCCCCCC
Q 003963 657 HETYL---TTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELAT-EKIPWDNLNSMQVIGAVGFMNQRLEIPKDVD 732 (783)
Q Consensus 657 ~~~~~---~~~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s 732 (783)
..... ......+++.|+|||++.+..++.++|||||||++|+|++ |..||...........+.. ......+..++
T Consensus 168 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~ 246 (291)
T 1xbb_A 168 RADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEK-GERMGCPAGCP 246 (291)
T ss_dssp CTTCSEEEC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHT-TCCCCCCTTCC
T ss_pred ccCCCcccccccCCCCceeeChHHhccCCCChhhhHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHc-CCCCCCCCCCC
Confidence 43321 1223456789999999998889999999999999999999 9999999888776655542 34566778899
Q ss_pred HHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHH
Q 003963 733 PRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQY 767 (783)
Q Consensus 733 ~~l~~LI~~cL~~dP~~RPsa~ell~~L~~L~~~~ 767 (783)
+.+.+||.+||..||.+||++.++++.|+++...-
T Consensus 247 ~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~~~ 281 (291)
T 1xbb_A 247 REMYDLMNLCWTYDVENRPGFAAVELRLRNYYYDV 281 (291)
T ss_dssp HHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999998886653
No 131
>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}
Probab=100.00 E-value=8e-42 Score=367.44 Aligned_cols=260 Identities=26% Similarity=0.312 Sum_probs=208.2
Q ss_pred ccccceeEeeeeccCCcEEEEEEEEeC-CceEEEEEEecccCC---HHHHHHHHHHHHHHHhC---CCCceeeEeceeec
Q 003963 502 ILWEDLTIGEQIGQGSCGTVYHAVWYG-SQDVAVKVFSRQEYS---DEVIHSFRQEVSLMKRL---RHPNVLLFMGAVTS 574 (783)
Q Consensus 502 ~~~~~y~i~~~LG~G~fG~Vy~a~~~~-~~~vAiK~i~~~~~~---~~~~~~~~~Ei~il~~l---~HpnIv~l~~~~~~ 574 (783)
...++|++.++||+|+||.||+|.+.. ++.||||++...... ......+.+|+.+++.+ +||||+++++++..
T Consensus 6 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~ 85 (308)
T 3g33_A 6 MATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCAT 85 (308)
T ss_dssp ----CCEEEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEE
T ss_pred ccccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeec
Confidence 445799999999999999999999754 567999998754321 11123455677776666 49999999999976
Q ss_pred CC-----ceEEEEEecCCCCHHHHHhhcCC-cchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEE
Q 003963 575 PQ-----RLCIVTEFLPRGSLFRLLQRNTT-KLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVG 648 (783)
Q Consensus 575 ~~-----~~~lV~E~~~ggsL~~~L~~~~~-~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~ 648 (783)
.. .+++||||+. ++|.+++..... .+++..++.++.||+.||+|||+++ |+||||||+|||++.++.+||+
T Consensus 86 ~~~~~~~~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~--ivH~Dlkp~Nil~~~~~~~kl~ 162 (308)
T 3g33_A 86 SRTDREIKVTLVFEHVD-QDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHANC--IVHRDLKPENILVTSGGTVKLA 162 (308)
T ss_dssp CCSSSEEEEEEEEECCC-CBHHHHHHTCCTTCSCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCCTTTEEECTTSCEEEC
T ss_pred cCCCCceeEEEEehhhh-cCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHCC--cccCCCCHHHEEEcCCCCEEEe
Confidence 55 4899999996 599999976543 3899999999999999999999999 9999999999999999999999
Q ss_pred ecCCCcccccccccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhcccccc---
Q 003963 649 DFGLSRLKHETYLTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRL--- 725 (783)
Q Consensus 649 DFGla~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~elltG~~Pf~~~~~~~~~~~i~~~~~~~--- 725 (783)
|||++....... ......||+.|+|||++.+..++.++|||||||++|+|++|++||...+.......+.......
T Consensus 163 Dfg~a~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~ 241 (308)
T 3g33_A 163 DFGLARIYSYQM-ALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPED 241 (308)
T ss_dssp SCSCTTTSTTCC-CSGGGGCCCSSCCHHHHHTSCCCSTHHHHHHHHHHHHTTTSSCSCCCSSHHHHHHHHHHHHCCCCTT
T ss_pred eCccccccCCCc-ccCCccccccccCchHHcCCCCCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChh
Confidence 999997654332 2234578999999999999999999999999999999999999999888776655542211100
Q ss_pred ----------------------cCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhcC
Q 003963 726 ----------------------EIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQAS 771 (783)
Q Consensus 726 ----------------------~~~~~~s~~l~~LI~~cL~~dP~~RPsa~ell~~L~~L~~~~f~~~ 771 (783)
.....+++.+.+||.+||+.||.+|||+.++ |+|+||+..
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~------l~h~~~~~~ 303 (308)
T 3g33_A 242 DWPRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRA------LQHSYLHKD 303 (308)
T ss_dssp TSCSSCSSCGGGSCCCCCCCHHHHSCSCCHHHHHHHHHHTCSSTTTSCCHHHH------HTSTTC---
T ss_pred hccchhhccccccCCCCCCcHHHhCccccHHHHHHHHHHhcCCCccCCCHHHH------hcCccccCC
Confidence 1124578999999999999999999999999 789999864
No 132
>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A
Probab=100.00 E-value=2.5e-41 Score=366.14 Aligned_cols=260 Identities=22% Similarity=0.342 Sum_probs=222.6
Q ss_pred ccccceeEeeeeccCCcEEEEEEEEeC-CceEEEEEEecccCCH----HHHHHHHHHHHHHHhCCCCceeeEeceeecCC
Q 003963 502 ILWEDLTIGEQIGQGSCGTVYHAVWYG-SQDVAVKVFSRQEYSD----EVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQ 576 (783)
Q Consensus 502 ~~~~~y~i~~~LG~G~fG~Vy~a~~~~-~~~vAiK~i~~~~~~~----~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~ 576 (783)
...++|++.+.||+|+||.||+|.+.. ++.||||++....... .....+.+|+.+++.++||||+++++++....
T Consensus 9 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~ 88 (321)
T 2a2a_A 9 KVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRT 88 (321)
T ss_dssp CHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSS
T ss_pred hhhccEEEeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEecCC
Confidence 345789999999999999999999865 5789999997654321 12467889999999999999999999999999
Q ss_pred ceEEEEEecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCC----cEEEEecCC
Q 003963 577 RLCIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHW----TVKVGDFGL 652 (783)
Q Consensus 577 ~~~lV~E~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~----~vkL~DFGl 652 (783)
.+++||||+++++|.+++... ..+++..++.++.||+.||.|||+++ |+||||||+|||++.++ .+||+|||+
T Consensus 89 ~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~aL~~lH~~~--ivH~dikp~NIl~~~~~~~~~~~kl~Dfg~ 165 (321)
T 2a2a_A 89 DVVLILELVSGGELFDFLAQK-ESLSEEEATSFIKQILDGVNYLHTKK--IAHFDLKPENIMLLDKNIPIPHIKLIDFGL 165 (321)
T ss_dssp EEEEEECCCCSCBHHHHHHTC-SCEEHHHHHHHHHHHHHHHHHHHHTT--EECCCCSGGGEEESCTTSSSCCEEECCCTT
T ss_pred EEEEEEEcCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCC--eecCCCChHHEEEecCCCCcCCEEEccCcc
Confidence 999999999999999999763 46899999999999999999999998 99999999999999887 799999999
Q ss_pred CcccccccccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccccc--ccCCCC
Q 003963 653 SRLKHETYLTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQR--LEIPKD 730 (783)
Q Consensus 653 a~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~elltG~~Pf~~~~~~~~~~~i~~~~~~--~~~~~~ 730 (783)
+....... ......||+.|+|||++.+..++.++|||||||++|+|++|..||...........+...... ..++..
T Consensus 166 ~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~ 244 (321)
T 2a2a_A 166 AHEIEDGV-EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYDFDEEFFSH 244 (321)
T ss_dssp CEECCTTC-CCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHTTCCCCCHHHHTT
T ss_pred ceecCccc-cccccCCCCCccCcccccCCCCCCccccHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcccccChhhhcc
Confidence 97655432 223457899999999999999999999999999999999999999988877766665432221 122357
Q ss_pred CCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhcC
Q 003963 731 VDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQAS 771 (783)
Q Consensus 731 ~s~~l~~LI~~cL~~dP~~RPsa~ell~~L~~L~~~~f~~~ 771 (783)
+++.+.+||.+||..||.+|||+.++ +.|+||+..
T Consensus 245 ~~~~~~~li~~~l~~dp~~Rps~~e~------l~hp~~~~~ 279 (321)
T 2a2a_A 245 TSELAKDFIRKLLVKETRKRLTIQEA------LRHPWITPV 279 (321)
T ss_dssp CCHHHHHHHHTTSCSSTTTSCCHHHH------HHSTTTSCS
T ss_pred cCHHHHHHHHHHcCCChhhCcCHHHH------hcCccccCC
Confidence 88999999999999999999999999 668888654
No 133
>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}
Probab=100.00 E-value=1.9e-41 Score=360.80 Aligned_cols=256 Identities=22% Similarity=0.389 Sum_probs=212.5
Q ss_pred ccceeEeeeeccCCcEEEEEEEEeC-CceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEeceeecCCceEEEE
Q 003963 504 WEDLTIGEQIGQGSCGTVYHAVWYG-SQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIVT 582 (783)
Q Consensus 504 ~~~y~i~~~LG~G~fG~Vy~a~~~~-~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lV~ 582 (783)
.++|.+.++||+|+||.||++.+.. +..||+|++....... ....+.+|+.+++.++||||+++++++......++||
T Consensus 21 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~-~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 99 (285)
T 3is5_A 21 DDLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQV-PMEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIVM 99 (285)
T ss_dssp HHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCCS-CHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hhheeecceeccCCCeEEEEEEEccCCceEEEEEeeccccch-hHHHHHHHHHHHHhCCCchHHhHHHheecCCeEEEEE
Confidence 3689999999999999999999864 5679999997765322 2457889999999999999999999999999999999
Q ss_pred EecCCCCHHHHHhhc---CCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEE---cCCCcEEEEecCCCccc
Q 003963 583 EFLPRGSLFRLLQRN---TTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLV---DKHWTVKVGDFGLSRLK 656 (783)
Q Consensus 583 E~~~ggsL~~~L~~~---~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl---~~~~~vkL~DFGla~~~ 656 (783)
||+++++|.+++... ...+++..++.++.||+.||.|||+++ |+||||||+|||| +.++.+||+|||++...
T Consensus 100 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~--ivH~dikp~NIl~~~~~~~~~~kl~Dfg~a~~~ 177 (285)
T 3is5_A 100 ETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQH--VVHKDLKPENILFQDTSPHSPIKIIDFGLAELF 177 (285)
T ss_dssp CCCSCCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTT--CCCCCCSGGGEEESSSSTTCCEEECCCCCCCC-
T ss_pred EeCCCCcHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHHHhCC--EEECCCCHHHEEEecCCCCCCEEEEeeecceec
Confidence 999999999998542 356999999999999999999999998 9999999999999 45678999999999765
Q ss_pred ccccccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccccccc-CCCCCCHHH
Q 003963 657 HETYLTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLE-IPKDVDPRW 735 (783)
Q Consensus 657 ~~~~~~~~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~elltG~~Pf~~~~~~~~~~~i~~~~~~~~-~~~~~s~~l 735 (783)
.... ......||+.|+|||++. ..++.++|||||||++|+|++|..||...........+........ ....+++++
T Consensus 178 ~~~~-~~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (285)
T 3is5_A 178 KSDE-HSTNAAGTALYMAPEVFK-RDVTFKCDIWSAGVVMYFLLTGCLPFTGTSLEEVQQKATYKEPNYAVECRPLTPQA 255 (285)
T ss_dssp ----------CTTGGGCCHHHHT-TCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCC--CCCCHHH
T ss_pred CCcc-cCcCcccccCcCChHHhc-cCCCcccCeehHHHHHHHHHhCCCCCCCCCHHHHHhhhccCCcccccccCcCCHHH
Confidence 5432 233557899999999986 4578999999999999999999999998887776655543332222 224478999
Q ss_pred HHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhc
Q 003963 736 AAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQA 770 (783)
Q Consensus 736 ~~LI~~cL~~dP~~RPsa~ell~~L~~L~~~~f~~ 770 (783)
.+||.+||..||.+|||+.++ |+|+||+.
T Consensus 256 ~~li~~~L~~dP~~Rps~~e~------l~hp~f~~ 284 (285)
T 3is5_A 256 VDLLKQMLTKDPERRPSAAQV------LHHEWFKQ 284 (285)
T ss_dssp HHHHHHHTCSCTTTSCCHHHH------HTSGGGGC
T ss_pred HHHHHHHccCChhhCcCHHHH------hcCHHhhc
Confidence 999999999999999999999 67899975
No 134
>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A
Probab=100.00 E-value=1.1e-41 Score=373.37 Aligned_cols=253 Identities=24% Similarity=0.387 Sum_probs=213.3
Q ss_pred cccceeEeeeeccCCcEEEEEEEEeC-CceEEEEEEecccCCHHHHHHHHHHHHHHHhC-CCCceeeEeceeecCCceEE
Q 003963 503 LWEDLTIGEQIGQGSCGTVYHAVWYG-SQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRL-RHPNVLLFMGAVTSPQRLCI 580 (783)
Q Consensus 503 ~~~~y~i~~~LG~G~fG~Vy~a~~~~-~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l-~HpnIv~l~~~~~~~~~~~l 580 (783)
..++|++.+.||+|+||.||+|.++. ++.||||++.+.... ..+|++++..+ +||||+++++++.+...+|+
T Consensus 20 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~------~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~l 93 (342)
T 2qr7_A 20 FTDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKRD------PTEEIEILLRYGQHPNIITLKDVYDDGKYVYV 93 (342)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTTCC------CHHHHHHHHHHTTSTTBCCEEEEEECSSEEEE
T ss_pred ccccEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEcccCC------hHHHHHHHHHhcCCCCcCeEEEEEEcCCEEEE
Confidence 35789999999999999999999865 567999999776432 24588888887 79999999999999999999
Q ss_pred EEEecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCC----CcEEEEecCCCccc
Q 003963 581 VTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKH----WTVKVGDFGLSRLK 656 (783)
Q Consensus 581 V~E~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~----~~vkL~DFGla~~~ 656 (783)
|||||+||+|.+++... ..+++..++.++.||+.||+|||++| |+||||||+|||+... +.+||+|||++...
T Consensus 94 v~E~~~gg~L~~~i~~~-~~~~~~~~~~~~~qi~~al~~lH~~g--ivHrDlkp~NIl~~~~~~~~~~~kl~Dfg~a~~~ 170 (342)
T 2qr7_A 94 VTELMKGGELLDKILRQ-KFFSEREASAVLFTITKTVEYLHAQG--VVHRDLKPSNILYVDESGNPESIRICDFGFAKQL 170 (342)
T ss_dssp EECCCCSCBHHHHHHTC-TTCCHHHHHHHHHHHHHHHHHHHHTT--EECSCCCGGGEEESSSSCSGGGEEECCCTTCEEC
T ss_pred EEeCCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCC--cEeccCCHHHEEEecCCCCcCeEEEEECCCcccC
Confidence 99999999999999764 46899999999999999999999998 9999999999998543 35999999999876
Q ss_pred ccccccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCC---ChHHHHHHhhccccc--ccCCCCC
Q 003963 657 HETYLTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNL---NSMQVIGAVGFMNQR--LEIPKDV 731 (783)
Q Consensus 657 ~~~~~~~~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~elltG~~Pf~~~---~~~~~~~~i~~~~~~--~~~~~~~ 731 (783)
..........+||+.|+|||++.+..++.++|||||||++|+|++|..||... ........+...... ...+..+
T Consensus 171 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 250 (342)
T 2qr7_A 171 RAENGLLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDDTPEEILARIGSGKFSLSGGYWNSV 250 (342)
T ss_dssp BCTTCCBCCSSCCSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSSCSSTTSCHHHHHHHHHHCCCCCCSTTTTTS
T ss_pred cCCCCceeccCCCccccCHHHhcCCCCCCccCeeeHhHHHHHHhcCCCCCCCCCcCCHHHHHHHHccCCcccCccccccC
Confidence 55444445678999999999999888899999999999999999999999753 344444444322222 2234678
Q ss_pred CHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhc
Q 003963 732 DPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQA 770 (783)
Q Consensus 732 s~~l~~LI~~cL~~dP~~RPsa~ell~~L~~L~~~~f~~ 770 (783)
++++.+||.+||..||.+||++.++ ++|+||+.
T Consensus 251 s~~~~~li~~~L~~dP~~R~t~~~i------l~hp~~~~ 283 (342)
T 2qr7_A 251 SDTAKDLVSKMLHVDPHQRLTAALV------LRHPWIVH 283 (342)
T ss_dssp CHHHHHHHHHHTCSSTTTSCCHHHH------TTSHHHHT
T ss_pred CHHHHHHHHHHCCCChhHCcCHHHH------hcCCeecC
Confidence 9999999999999999999999999 67899854
No 135
>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=5.9e-41 Score=357.88 Aligned_cols=260 Identities=30% Similarity=0.564 Sum_probs=221.6
Q ss_pred ceeEeeeeccCCcEEEEEEEEeCCc----eEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEeceeecCCce-EE
Q 003963 506 DLTIGEQIGQGSCGTVYHAVWYGSQ----DVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRL-CI 580 (783)
Q Consensus 506 ~y~i~~~LG~G~fG~Vy~a~~~~~~----~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~-~l 580 (783)
.|.+.++||+|+||.||+|.+.... .||+|++.... .....+.+.+|+.+++.++||||+++++++...+.. ++
T Consensus 22 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 100 (298)
T 3pls_A 22 VTHSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRIT-EMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPHV 100 (298)
T ss_dssp EEEEEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCC-SHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEE
T ss_pred EEccCceeccCCCceEEEEEEecCCCceeeeeeeeccccc-cHHHHHHHHHHHHHHHhCCCCCeeeEEEEEecCCCCcEE
Confidence 5777899999999999999875432 59999986533 445567889999999999999999999999876655 99
Q ss_pred EEEecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCccccccc
Q 003963 581 VTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETY 660 (783)
Q Consensus 581 V~E~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~ 660 (783)
||||+.+++|.+++......+++..++.++.||+.||+|||+++ |+||||||+|||++.++.+||+|||++.......
T Consensus 101 v~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~--i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~ 178 (298)
T 3pls_A 101 LLPYMCHGDLLQFIRSPQRNPTVKDLISFGLQVARGMEYLAEQK--FVHRDLAARNCMLDESFTVKVADFGLARDILDRE 178 (298)
T ss_dssp EECCCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTT--CCCSCCSGGGEEECTTCCEEECCTTSSCTTTTGG
T ss_pred EEecccCCCHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCC--cccCCCCcceEEEcCCCcEEeCcCCCcccccCCc
Confidence 99999999999999876777999999999999999999999998 9999999999999999999999999997554321
Q ss_pred ----ccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCChHHHHHHhhcccccccCCCCCCHHH
Q 003963 661 ----LTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELAT-EKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRW 735 (783)
Q Consensus 661 ----~~~~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~l 735 (783)
.......+++.|+|||.+.+..++.++|||||||++|+|++ +.+||...+.......+. .......+..+++.+
T Consensus 179 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l 257 (298)
T 3pls_A 179 YYSVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHIDPFDLTHFLA-QGRRLPQPEYCPDSL 257 (298)
T ss_dssp GGCSCCSSCTTCGGGGSCHHHHTTCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCGGGHHHHHH-TTCCCCCCTTCCHHH
T ss_pred ccccccCcCCCCCccccChhhhccCCCChhhchhhHHHHHHHHhhCCCCCCccCCHHHHHHHhh-cCCCCCCCccchHHH
Confidence 12234467889999999999999999999999999999999 566676666665554443 333556677899999
Q ss_pred HHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhh
Q 003963 736 AAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQ 769 (783)
Q Consensus 736 ~~LI~~cL~~dP~~RPsa~ell~~L~~L~~~~f~ 769 (783)
.+||.+||..||.+|||+.++++.|+++...+..
T Consensus 258 ~~li~~~l~~~p~~Rps~~~ll~~l~~~~~~l~~ 291 (298)
T 3pls_A 258 YQVMQQCWEADPAVRPTFRVLVGEVEQIVSALLG 291 (298)
T ss_dssp HHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHCCS
T ss_pred HHHHHHHccCChhhCcCHHHHHHHHHHHHHHHhc
Confidence 9999999999999999999999999999887654
No 136
>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A
Probab=100.00 E-value=2.1e-41 Score=389.30 Aligned_cols=260 Identities=33% Similarity=0.587 Sum_probs=226.9
Q ss_pred ccccccccceeEeeeeccCCcEEEEEEEEeC-CceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEeceeecCC
Q 003963 498 LDYEILWEDLTIGEQIGQGSCGTVYHAVWYG-SQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQ 576 (783)
Q Consensus 498 ~~~e~~~~~y~i~~~LG~G~fG~Vy~a~~~~-~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~ 576 (783)
..+++...+|++.++||+|+||.||+|.+.. +..||||++...... .+.+.+|+.+|+.++|||||++++++....
T Consensus 213 ~~~~~~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~---~~~~~~E~~~l~~l~hpniv~l~~~~~~~~ 289 (495)
T 1opk_A 213 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME---VEEFLKEAAVMKEIKHPNLVQLLGVCTREP 289 (495)
T ss_dssp SCCBCCGGGEEEEEESGGGTTSSEEEEEEGGGTEEEEEEECCSSSSC---HHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred cccccCHHHceeeeEecCCCCeEEEEEEEcCCCeEEEEEEecCcccc---hHHHHHHHHHHHhcCCCCEeeEEEEEecCC
Confidence 3467778899999999999999999999875 567999999765443 357889999999999999999999999999
Q ss_pred ceEEEEEecCCCCHHHHHhhc-CCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCcc
Q 003963 577 RLCIVTEFLPRGSLFRLLQRN-TTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRL 655 (783)
Q Consensus 577 ~~~lV~E~~~ggsL~~~L~~~-~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~ 655 (783)
.+|+|||||++|+|.+++... ...+++..++.++.||+.||+|||+++ |+||||||+||||+.++.+||+|||+++.
T Consensus 290 ~~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~--ivHrDlkp~NIll~~~~~~kl~DFG~a~~ 367 (495)
T 1opk_A 290 PFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKN--FIHRNLAARNCLVGENHLVKVADFGLSRL 367 (495)
T ss_dssp SCEEEEECCTTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHHHTT--EECSCCSGGGEEECGGGCEEECCTTCEEC
T ss_pred cEEEEEEccCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhCC--cccCCCChhhEEECCCCcEEEeeccccee
Confidence 999999999999999999763 345899999999999999999999998 99999999999999999999999999986
Q ss_pred ccccc-ccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCChHHHHHHhhcccccccCCCCCCH
Q 003963 656 KHETY-LTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELAT-EKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDP 733 (783)
Q Consensus 656 ~~~~~-~~~~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~ 733 (783)
..... .......+++.|+|||++.+..++.++|||||||+||||++ |..||...+..+....+. .......+..+++
T Consensus 368 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlG~~l~el~t~g~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 446 (495)
T 1opk_A 368 MTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLE-KDYRMERPEGCPE 446 (495)
T ss_dssp CTTCCEECCTTCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHHH-TTCCCCCCTTCCH
T ss_pred ccCCceeecCCCcCCcceeCHhHHhcCCCCcHHhHHhHHHHHHHHHhCCCCCCCCCCHHHHHHHHH-cCCCCCCCCCCCH
Confidence 54332 22233456789999999999889999999999999999999 999999888776665543 3345667888999
Q ss_pred HHHHHHHHhhhhCCCCCCCHHHHHHHHHHH
Q 003963 734 RWAAIVESCWHSDPQCRPSFQELVDKLRDL 763 (783)
Q Consensus 734 ~l~~LI~~cL~~dP~~RPsa~ell~~L~~L 763 (783)
.+.+||.+||+.||.+|||+.+|++.|+.+
T Consensus 447 ~l~~li~~cl~~dP~~RPs~~el~~~L~~~ 476 (495)
T 1opk_A 447 KVYELMRACWQWNPSDRPSFAEIHQAFETM 476 (495)
T ss_dssp HHHHHHHHHTCSSGGGSCCHHHHHHHHHTS
T ss_pred HHHHHHHHHcCcChhHCcCHHHHHHHHHHH
Confidence 999999999999999999999999988765
No 137
>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}
Probab=100.00 E-value=4.5e-41 Score=362.09 Aligned_cols=259 Identities=27% Similarity=0.445 Sum_probs=218.7
Q ss_pred ccccceeEeeeeccCCcEEEEEEEEeC-CceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEeceeecCCceEE
Q 003963 502 ILWEDLTIGEQIGQGSCGTVYHAVWYG-SQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCI 580 (783)
Q Consensus 502 ~~~~~y~i~~~LG~G~fG~Vy~a~~~~-~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~l 580 (783)
...++|++.+.||+|+||.||+|.+.. ++.||||++...... ..+.+|+.+++.++||||+++++++...+.+|+
T Consensus 26 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~----~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 101 (314)
T 3com_A 26 QPEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVESDL----QEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWI 101 (314)
T ss_dssp ----CEEEEEECC----CEEEEEEETTTCCEEEEEEEETTSCC----HHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEE
T ss_pred cchhhhhhheeeccCCCeEEEEEEECCCCCEEEEEecCchHHH----HHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEE
Confidence 445789999999999999999999865 578999999765432 467789999999999999999999999999999
Q ss_pred EEEecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCccccccc
Q 003963 581 VTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETY 660 (783)
Q Consensus 581 V~E~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~ 660 (783)
||||+++++|.+++......+++..++.++.||+.||.|||+++ |+|+||||+|||++.++.+||+|||++.......
T Consensus 102 v~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~--i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~ 179 (314)
T 3com_A 102 VMEYCGAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLHFMR--KIHRDIKAGNILLNTEGHAKLADFGVAGQLTDTM 179 (314)
T ss_dssp EEECCTTEEHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTT--EECCCCSGGGEEECTTCCEEECCCTTCEECBTTB
T ss_pred EeecCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCC--CcCCCcCHHHEEECCCCCEEEeecccchhhhhhc
Confidence 99999999999999866677999999999999999999999998 9999999999999999999999999997765544
Q ss_pred ccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccc-ccccCCCCCCHHHHHHH
Q 003963 661 LTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMN-QRLEIPKDVDPRWAAIV 739 (783)
Q Consensus 661 ~~~~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~elltG~~Pf~~~~~~~~~~~i~~~~-~~~~~~~~~s~~l~~LI 739 (783)
.......|++.|+|||++.+..++.++|||||||++|+|++|..||...........+.... .....+..+++.+.+||
T Consensus 180 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 259 (314)
T 3com_A 180 AKRNTVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIHPMRAIFMIPTNPPPTFRKPELWSDNFTDFV 259 (314)
T ss_dssp SCBCCCCSCGGGCCHHHHSSSCBCTTHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCCCCCSSGGGSCHHHHHHH
T ss_pred cccCccCCCCCccChhhcCCCCCCccccHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCcccCCcccCCHHHHHHH
Confidence 44455678999999999999999999999999999999999999999887766554432221 22334556899999999
Q ss_pred HHhhhhCCCCCCCHHHHHHHHHHHHHHHhhcCc
Q 003963 740 ESCWHSDPQCRPSFQELVDKLRDLQRQYFQASR 772 (783)
Q Consensus 740 ~~cL~~dP~~RPsa~ell~~L~~L~~~~f~~~~ 772 (783)
.+||..||.+||++.++ ++|+||+...
T Consensus 260 ~~~l~~dp~~Rpt~~~l------l~~~~~~~~~ 286 (314)
T 3com_A 260 KQCLVKSPEQRATATQL------LQHPFVRSAK 286 (314)
T ss_dssp HHHTCSCTTTSCCHHHH------TTSHHHHTCC
T ss_pred HHHccCChhhCcCHHHH------HhCHHHhcCC
Confidence 99999999999999999 6789997654
No 138
>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*
Probab=100.00 E-value=2.2e-41 Score=360.02 Aligned_cols=262 Identities=34% Similarity=0.542 Sum_probs=216.6
Q ss_pred cccccceeEeeeeccCCcEEEEEEEEeCC--c--eEEEEEEecccCC-HHHHHHHHHHHHHHHhCCCCceeeEeceeecC
Q 003963 501 EILWEDLTIGEQIGQGSCGTVYHAVWYGS--Q--DVAVKVFSRQEYS-DEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSP 575 (783)
Q Consensus 501 e~~~~~y~i~~~LG~G~fG~Vy~a~~~~~--~--~vAiK~i~~~~~~-~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~ 575 (783)
.+..++|++.++||+|+||.||+|.+... + .||||++...... ....+.+.+|+.+++.++||||+++++++...
T Consensus 14 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~ 93 (291)
T 1u46_A 14 LIGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTP 93 (291)
T ss_dssp ECCGGGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred ccchhHeeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEccC
Confidence 34457999999999999999999986532 2 5899998765432 35567889999999999999999999999876
Q ss_pred CceEEEEEecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCcc
Q 003963 576 QRLCIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRL 655 (783)
Q Consensus 576 ~~~~lV~E~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~ 655 (783)
. .++||||+++++|.+++......+++..++.++.||+.||.|||+++ |+|+||||+|||++.++.+||+|||++..
T Consensus 94 ~-~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~--i~H~dikp~Nili~~~~~~kl~Dfg~~~~ 170 (291)
T 1u46_A 94 P-MKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKR--FIHRDLAARNLLLATRDLVKIGDFGLMRA 170 (291)
T ss_dssp S-CEEEEECCTTCBHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHHHTT--EECSCCCGGGEEEEETTEEEECCCTTCEE
T ss_pred C-ceeeEecccCCCHHHHHHhccCCcCHHHHHHHHHHHHHHHHHHHhCC--cccCCCchheEEEcCCCCEEEcccccccc
Confidence 5 89999999999999999876667999999999999999999999998 99999999999999999999999999976
Q ss_pred cccccc---cccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCChHHHHHHhhcccccccCCCCC
Q 003963 656 KHETYL---TTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELAT-EKIPWDNLNSMQVIGAVGFMNQRLEIPKDV 731 (783)
Q Consensus 656 ~~~~~~---~~~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~ 731 (783)
...... ......+|+.|+|||++.+..++.++|||||||++|+|++ |..||...+.......+.........+..+
T Consensus 171 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (291)
T 1u46_A 171 LPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPEDC 250 (291)
T ss_dssp CCC-CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTSCCCCCCCTTC
T ss_pred ccccccchhhhccCCCCceeeCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCcccCCHHHHHHHHHccCCCCCCCcCc
Confidence 543321 2223457889999999998889999999999999999999 999999998888777775555566677889
Q ss_pred CHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHH
Q 003963 732 DPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQR 765 (783)
Q Consensus 732 s~~l~~LI~~cL~~dP~~RPsa~ell~~L~~L~~ 765 (783)
++++.++|.+||..||.+||++.++++.|++++.
T Consensus 251 ~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~ 284 (291)
T 1u46_A 251 PQDIYNVMVQCWAHKPEDRPTFVALRDFLLEAQP 284 (291)
T ss_dssp CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC-
T ss_pred CHHHHHHHHHHccCCcccCcCHHHHHHHHHHhCc
Confidence 9999999999999999999999999999887754
No 139
>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*
Probab=100.00 E-value=5.6e-42 Score=364.43 Aligned_cols=255 Identities=25% Similarity=0.447 Sum_probs=216.3
Q ss_pred cccccceeEeeeeccCCcEEEEEEEEeCC--------ceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEecee
Q 003963 501 EILWEDLTIGEQIGQGSCGTVYHAVWYGS--------QDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAV 572 (783)
Q Consensus 501 e~~~~~y~i~~~LG~G~fG~Vy~a~~~~~--------~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~ 572 (783)
++..++|++.+.||+|+||.||+|.+... ..||+|++..... ...+.+.+|+.+++.++||||+++++++
T Consensus 4 ~i~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~~--~~~~~~~~E~~~l~~l~h~~iv~~~~~~ 81 (289)
T 4fvq_A 4 KIRNEDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHR--NYSESFFEAASMMSKLSHKHLVLNYGVC 81 (289)
T ss_dssp BCCGGGEEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGGG--GGHHHHHHHHHHHHTSCCTTBCCEEEEE
T ss_pred EechhHeeeeeeeccCCCceEEEEEEecccccccccchhhhhhhcccccH--HHHHHHHHHHHHHHhCCCCCEeEEEEEE
Confidence 45568999999999999999999987643 3599999865432 3346788999999999999999999999
Q ss_pred ecCCceEEEEEecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCc--------
Q 003963 573 TSPQRLCIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWT-------- 644 (783)
Q Consensus 573 ~~~~~~~lV~E~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~-------- 644 (783)
...+..++||||+++++|.+++......+++..++.++.||+.||.|||+++ |+||||||+|||++.++.
T Consensus 82 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~--ivH~Dlkp~NIll~~~~~~~~~~~~~ 159 (289)
T 4fvq_A 82 VCGDENILVQEFVKFGSLDTYLKKNKNCINILWKLEVAKQLAAAMHFLEENT--LIHGNVCAKNILLIREEDRKTGNPPF 159 (289)
T ss_dssp CCTTCCEEEEECCTTCBHHHHHHHTGGGCCHHHHHHHHHHHHHHHHHHHHTT--CCCCCCCGGGEEEEECCBGGGTBCCE
T ss_pred EeCCCCEEEEECCCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHhhCC--eECCCcCcceEEEecCCcccccccce
Confidence 9999999999999999999999887767999999999999999999999999 999999999999998877
Q ss_pred EEEEecCCCcccccccccccCCCCCCcccCcccccC-CCCCchhHHHHHHHHHHHHHc-CCCCCCCCChHHHHHHhhccc
Q 003963 645 VKVGDFGLSRLKHETYLTTKTGKGTPQWMAPEVLRN-EPSDEKSDVYSFGVILWELAT-EKIPWDNLNSMQVIGAVGFMN 722 (783)
Q Consensus 645 vkL~DFGla~~~~~~~~~~~~~~Gt~~Y~aPE~~~~-~~~s~~sDIwSLG~il~ellt-G~~Pf~~~~~~~~~~~i~~~~ 722 (783)
+||+|||++....... ...||+.|+|||++.+ ..++.++|||||||++|+|++ +.+||............ .
T Consensus 160 ~kl~Dfg~~~~~~~~~----~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~~~~~~---~ 232 (289)
T 4fvq_A 160 IKLSDPGISITVLPKD----ILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALDSQRKLQFY---E 232 (289)
T ss_dssp EEECCCCSCTTTSCHH----HHHHTTTTSCHHHHHCGGGCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHH---H
T ss_pred eeeccCcccccccCcc----ccCCcCcccCHHHhCCCCCCCchhHHHHHHHHHHHHHcCCCCCccccchHHHHHHh---h
Confidence 9999999986544321 2346888999999987 678999999999999999999 56666666655443332 2
Q ss_pred ccccCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHH
Q 003963 723 QRLEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQ 766 (783)
Q Consensus 723 ~~~~~~~~~s~~l~~LI~~cL~~dP~~RPsa~ell~~L~~L~~~ 766 (783)
....++..+++++.+||.+||+.||.+|||+.++++.|+++..+
T Consensus 233 ~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~l~~p 276 (289)
T 4fvq_A 233 DRHQLPAPKAAELANLINNCMDYEPDHRPSFRAIIRDLNSLFTP 276 (289)
T ss_dssp TTCCCCCCSSCTTHHHHHHHSCSSGGGSCCHHHHHHHHHTCC--
T ss_pred ccCCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhcCC
Confidence 34556677889999999999999999999999999999877554
No 140
>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...
Probab=100.00 E-value=2.1e-41 Score=358.98 Aligned_cols=261 Identities=23% Similarity=0.395 Sum_probs=220.2
Q ss_pred ccceeEeeeeccCCcEEEEEEEEeC-CceEEEEEEecccCCH----HHHHHHHHHHHHHHhCCCCceeeEeceeecCCce
Q 003963 504 WEDLTIGEQIGQGSCGTVYHAVWYG-SQDVAVKVFSRQEYSD----EVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRL 578 (783)
Q Consensus 504 ~~~y~i~~~LG~G~fG~Vy~a~~~~-~~~vAiK~i~~~~~~~----~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~ 578 (783)
.++|++.+.||+|+||.||+|.+.. ++.||+|++....... ...+.+.+|+.+++.++||||+++++++......
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~ 83 (283)
T 3bhy_A 4 EDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDV 83 (283)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred hhhhhhHHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheecCCCeE
Confidence 4689999999999999999999874 5789999997654322 1246788999999999999999999999999999
Q ss_pred EEEEEecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCC----cEEEEecCCCc
Q 003963 579 CIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHW----TVKVGDFGLSR 654 (783)
Q Consensus 579 ~lV~E~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~----~vkL~DFGla~ 654 (783)
++||||+++++|.+++... ..+++..++.++.||+.||.|||+++ |+|+||||+||+++.++ .+||+|||++.
T Consensus 84 ~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~--i~H~dl~p~Nil~~~~~~~~~~~kl~dfg~~~ 160 (283)
T 3bhy_A 84 VLILELVSGGELFDFLAEK-ESLTEDEATQFLKQILDGVHYLHSKR--IAHFDLKPENIMLLDKNVPNPRIKLIDFGIAH 160 (283)
T ss_dssp EEEEECCCSCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHHTT--EECSCCSGGGEEESCSSSSSCCEEECCCTTCE
T ss_pred EEEEeecCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCC--ccCCCCChHHEEEecCCCCCCceEEEecccce
Confidence 9999999999999999763 46899999999999999999999998 99999999999998876 89999999997
Q ss_pred ccccccccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccccc--ccCCCCCC
Q 003963 655 LKHETYLTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQR--LEIPKDVD 732 (783)
Q Consensus 655 ~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~elltG~~Pf~~~~~~~~~~~i~~~~~~--~~~~~~~s 732 (783)
...... ......|++.|+|||++.+..++.++|||||||++|+|++|..||...........+...... ...+..++
T Consensus 161 ~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (283)
T 3bhy_A 161 KIEAGN-EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYDFDEEYFSNTS 239 (283)
T ss_dssp ECC---------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTTCCCCCHHHHTTCC
T ss_pred eccCCC-cccccCCCcCccCcceecCCCCCcchhhhhHHHHHHHHHHCCCCCCCcchHHHHHHhHhcccCCcchhcccCC
Confidence 654432 223456899999999999999999999999999999999999999988877766655433221 22335788
Q ss_pred HHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhcCcCC
Q 003963 733 PRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQASRST 774 (783)
Q Consensus 733 ~~l~~LI~~cL~~dP~~RPsa~ell~~L~~L~~~~f~~~~~~ 774 (783)
+.+.+||.+||..||.+||++.++ +.|+||+..+..
T Consensus 240 ~~~~~li~~~l~~dp~~Rps~~~~------l~h~~~~~~~~~ 275 (283)
T 3bhy_A 240 ELAKDFIRRLLVKDPKRRMTIAQS------LEHSWIKAIRRR 275 (283)
T ss_dssp HHHHHHHHTTSCSSGGGSCCHHHH------HHCHHHHHHHHC
T ss_pred HHHHHHHHHHccCCHhHCcCHHHH------HhCHHHHHHHHH
Confidence 999999999999999999999999 678898776543
No 141
>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}
Probab=100.00 E-value=3.5e-41 Score=364.93 Aligned_cols=261 Identities=28% Similarity=0.433 Sum_probs=212.7
Q ss_pred cccccceeEeeeeccCCcEEEEEEEEe-CCceEEEEEEecccCCHHHHHHHHHHHHHHHhC-CCCceeeEeceeec----
Q 003963 501 EILWEDLTIGEQIGQGSCGTVYHAVWY-GSQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRL-RHPNVLLFMGAVTS---- 574 (783)
Q Consensus 501 e~~~~~y~i~~~LG~G~fG~Vy~a~~~-~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l-~HpnIv~l~~~~~~---- 574 (783)
....++|++.+.||+|+||.||+|.+. .++.||||++....... ..+.+|+.+++.+ +||||+++++++..
T Consensus 20 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~---~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~ 96 (326)
T 2x7f_A 20 RDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEE---EEIKQEINMLKKYSHHRNIATYYGAFIKKNPP 96 (326)
T ss_dssp CCCTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSSTT---HHHHHHHHHHHHHCCSTTBCCEEEEEEECC--
T ss_pred cCCCCcEEEEEEeccCCCEEEEEEEECCCCCeEEEEEEecCcccH---HHHHHHHHHHHhccCCCCeeeeeeEEeeccCc
Confidence 345689999999999999999999985 45789999997654332 4678899999999 79999999999976
Q ss_pred --CCceEEEEEecCCCCHHHHHhhc-CCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecC
Q 003963 575 --PQRLCIVTEFLPRGSLFRLLQRN-TTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFG 651 (783)
Q Consensus 575 --~~~~~lV~E~~~ggsL~~~L~~~-~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFG 651 (783)
...+++||||+++++|.+++... ...+++..++.++.||+.||.|||+++ |+|+||||+||||+.++.+||+|||
T Consensus 97 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~--ivH~dlkp~NIl~~~~~~~kl~Dfg 174 (326)
T 2x7f_A 97 GMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHK--VIHRDIKGQNVLLTENAEVKLVDFG 174 (326)
T ss_dssp CCCCEEEEEEECCTTEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHTT--CCCCCCSGGGEEECTTCCEEECCCT
T ss_pred cccceEEEEEEcCCCCcHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHCC--ccccCCcHHHEEEcCCCCEEEeeCc
Confidence 46789999999999999999764 346899999999999999999999998 9999999999999999999999999
Q ss_pred CCcccccccccccCCCCCCcccCccccc-----CCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccccccc
Q 003963 652 LSRLKHETYLTTKTGKGTPQWMAPEVLR-----NEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLE 726 (783)
Q Consensus 652 la~~~~~~~~~~~~~~Gt~~Y~aPE~~~-----~~~~s~~sDIwSLG~il~elltG~~Pf~~~~~~~~~~~i~~~~~~~~ 726 (783)
++..............|++.|+|||++. +..++.++|||||||++|+|++|..||...+.......+........
T Consensus 175 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~ 254 (326)
T 2x7f_A 175 VSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALFLIPRNPAPRL 254 (326)
T ss_dssp TTC-------------CCGGGCCHHHHC--------CCTTHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCCCCC
T ss_pred CceecCcCccccccccCCccccChhhhccccccCcCCCccchHHHHHHHHHHHHhCCCCCCCCcHHHHHHHhhcCccccC
Confidence 9986654433344567899999999987 56688999999999999999999999998887766555433333333
Q ss_pred CCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhcCc
Q 003963 727 IPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQASR 772 (783)
Q Consensus 727 ~~~~~s~~l~~LI~~cL~~dP~~RPsa~ell~~L~~L~~~~f~~~~ 772 (783)
.+..+++.+.+||.+||..||.+||++.++ ++|+||+...
T Consensus 255 ~~~~~~~~l~~li~~~l~~dp~~Rps~~~l------l~hp~~~~~~ 294 (326)
T 2x7f_A 255 KSKKWSKKFQSFIESCLVKNHSQRPATEQL------MKHPFIRDQP 294 (326)
T ss_dssp SCSCSCHHHHHHHHHHCCSSGGGSCCHHHH------HTSHHHHCCT
T ss_pred CccccCHHHHHHHHHHhccChhhCCCHHHH------hhChHHhhCc
Confidence 456789999999999999999999999999 6788887543
No 142
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*
Probab=100.00 E-value=2.3e-41 Score=388.83 Aligned_cols=258 Identities=28% Similarity=0.404 Sum_probs=215.8
Q ss_pred cccceeEeeeeccCCcEEEEEEEEeC-CceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEeceeecCCceEEE
Q 003963 503 LWEDLTIGEQIGQGSCGTVYHAVWYG-SQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIV 581 (783)
Q Consensus 503 ~~~~y~i~~~LG~G~fG~Vy~a~~~~-~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lV 581 (783)
..++|+++++||+|+||.||+|.+.. +..||||++............+.+|+.+++.++|||||++++++.....+|+|
T Consensus 35 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv 114 (494)
T 3lij_A 35 LSEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLV 114 (494)
T ss_dssp HHHHEEEEEEEECC---EEEEEEETTTCCEEEEEEEEC-----CTTHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred hhcCeEEeeEEecCCCEEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEE
Confidence 34689999999999999999999864 56799999987654443356788999999999999999999999999999999
Q ss_pred EEecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcC---CCcEEEEecCCCccccc
Q 003963 582 TEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDK---HWTVKVGDFGLSRLKHE 658 (783)
Q Consensus 582 ~E~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~---~~~vkL~DFGla~~~~~ 658 (783)
||||++|+|.+++... ..+++..++.++.||+.||.|||+++ |+||||||+||||+. ++.+||+|||++.....
T Consensus 115 ~e~~~~g~L~~~~~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~--ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~a~~~~~ 191 (494)
T 3lij_A 115 MECYKGGELFDEIIHR-MKFNEVDAAVIIKQVLSGVTYLHKHN--IVHRDLKPENLLLESKEKDALIKIVDFGLSAVFEN 191 (494)
T ss_dssp EECCCSCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHHTT--EECSCCSGGGEEESCSSTTCCEEECCCTTCEECBT
T ss_pred EecCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCC--ceeccCChhhEEEeCCCCCCcEEEEECCCCeECCC
Confidence 9999999999988764 45899999999999999999999998 999999999999976 45599999999986654
Q ss_pred ccccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccccccc--CCCCCCHHHH
Q 003963 659 TYLTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLE--IPKDVDPRWA 736 (783)
Q Consensus 659 ~~~~~~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~elltG~~Pf~~~~~~~~~~~i~~~~~~~~--~~~~~s~~l~ 736 (783)
.. .....+||+.|+|||++.+ .++.++|||||||++|+|++|.+||...+.......+........ ....+++.+.
T Consensus 192 ~~-~~~~~~gt~~y~aPE~l~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~ 269 (494)
T 3lij_A 192 QK-KMKERLGTAYYIAPEVLRK-KYDEKCDVWSIGVILFILLAGYPPFGGQTDQEILRKVEKGKYTFDSPEWKNVSEGAK 269 (494)
T ss_dssp TB-CBCCCCSCTTTCCHHHHTT-CBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCSGGGTTSCHHHH
T ss_pred Cc-cccccCCCcCeeCHHHHcc-cCCCchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCchhcccCCHHHH
Confidence 32 2345679999999999864 589999999999999999999999999988887777654433322 2357899999
Q ss_pred HHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhcC
Q 003963 737 AIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQAS 771 (783)
Q Consensus 737 ~LI~~cL~~dP~~RPsa~ell~~L~~L~~~~f~~~ 771 (783)
+||.+||+.||.+|||+.++ |+|+||+..
T Consensus 270 ~li~~~L~~dp~~R~s~~e~------l~hp~~~~~ 298 (494)
T 3lij_A 270 DLIKQMLQFDSQRRISAQQA------LEHPWIKEM 298 (494)
T ss_dssp HHHHHHTCSSTTTSCCHHHH------HTCHHHHHH
T ss_pred HHHHHHCCCChhhCccHHHH------hcCcccccC
Confidence 99999999999999999999 677888653
No 143
>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...
Probab=100.00 E-value=3.4e-41 Score=360.34 Aligned_cols=262 Identities=31% Similarity=0.527 Sum_probs=220.1
Q ss_pred ccceeEeeeeccCCcEEEEEEEEeCC----ceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEecee-ecCCce
Q 003963 504 WEDLTIGEQIGQGSCGTVYHAVWYGS----QDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAV-TSPQRL 578 (783)
Q Consensus 504 ~~~y~i~~~LG~G~fG~Vy~a~~~~~----~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~-~~~~~~ 578 (783)
..+|++.++||+|+||.||+|.+..+ ..||+|++.... .......+.+|+.+++.++||||+++++++ ..++..
T Consensus 24 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 102 (298)
T 3f66_A 24 SLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRIT-DIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSP 102 (298)
T ss_dssp GEEEEEEEEEEEETTEEEEEEEEC-----CEEEEEEEETTCC-SHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCC
T ss_pred ceehhhcceeeecCCceEEEEEEecCCCceeEEEEEecccCC-CHHHHHHHHHHHHHHHhCCCCCEeeeeeEEEcCCCce
Confidence 45799999999999999999986432 248999886533 445567889999999999999999999985 456688
Q ss_pred EEEEEecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCccccc
Q 003963 579 CIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHE 658 (783)
Q Consensus 579 ~lV~E~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~~ 658 (783)
++||||+++++|.+++......+++..++.++.||+.||.|||+++ |+||||||+|||++.++.+||+|||++.....
T Consensus 103 ~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~ql~~~l~~lH~~~--i~H~dikp~Nil~~~~~~~kl~Dfg~a~~~~~ 180 (298)
T 3f66_A 103 LVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKK--FVHRDLAARNCMLDEKFTVKVADFGLARDMYD 180 (298)
T ss_dssp EEEEECCTTCBHHHHHHCTTCCCCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCSGGGEEECTTCCEEECSCGGGCCCSC
T ss_pred EEEEeCCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCC--ccCCCCchheEEECCCCCEEECcccccccccc
Confidence 9999999999999999876777899999999999999999999998 99999999999999999999999999976543
Q ss_pred ccc----cccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCChHHHHHHhhcccccccCCCCCCH
Q 003963 659 TYL----TTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELAT-EKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDP 733 (783)
Q Consensus 659 ~~~----~~~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~ 733 (783)
... ......||+.|+|||++.+..++.++|||||||++|+|++ |.+||...+.......+. .......+..+++
T Consensus 181 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 259 (298)
T 3f66_A 181 KEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLL-QGRRLLQPEYCPD 259 (298)
T ss_dssp GGGCBC-----CCBCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTSCTTTHHHHHH-TTCCCCCCTTCCH
T ss_pred cchhccccccCCCCCccccChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCccCCHHHHHHHHh-cCCCCCCCccCCH
Confidence 221 1223457889999999999999999999999999999999 677887776665554443 2334555778899
Q ss_pred HHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhh
Q 003963 734 RWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQ 769 (783)
Q Consensus 734 ~l~~LI~~cL~~dP~~RPsa~ell~~L~~L~~~~f~ 769 (783)
.+.+||.+||..||.+||++.++++.|+++...++.
T Consensus 260 ~l~~li~~~l~~~p~~Rps~~ell~~L~~~~~~~~~ 295 (298)
T 3f66_A 260 PLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFIG 295 (298)
T ss_dssp HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHTSCC
T ss_pred HHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhhcc
Confidence 999999999999999999999999999998876653
No 144
>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*
Probab=100.00 E-value=7.6e-42 Score=361.54 Aligned_cols=263 Identities=25% Similarity=0.404 Sum_probs=221.1
Q ss_pred ccceeEeeeeccCCcEEEEEEEEeC-CceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEeceee--cCCceEE
Q 003963 504 WEDLTIGEQIGQGSCGTVYHAVWYG-SQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVT--SPQRLCI 580 (783)
Q Consensus 504 ~~~y~i~~~LG~G~fG~Vy~a~~~~-~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~--~~~~~~l 580 (783)
.++|++.+.||+|+||.||++.+.. ++.||+|++..........+.+.+|+.+++.++||||+++++++. ....+++
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~l 84 (279)
T 2w5a_A 5 AEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYI 84 (279)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEGGGTEEEE
T ss_pred hhheeeehhccCCCCcEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhcCCCCCCeEEEEEecCCCceEEE
Confidence 4789999999999999999999864 577999999887777777788999999999999999999999874 4678999
Q ss_pred EEEecCCCCHHHHHhhc---CCcchHHHHHHHHHHHHHHHHHHHhCC---CCEEecCCCCCCEEEcCCCcEEEEecCCCc
Q 003963 581 VTEFLPRGSLFRLLQRN---TTKLDWRRRILMALDIARGVSYLHHCN---PPIIHRDLKSSNLLVDKHWTVKVGDFGLSR 654 (783)
Q Consensus 581 V~E~~~ggsL~~~L~~~---~~~l~~~~~~~i~~qi~~aL~~LH~~~---~~IvHrDIKp~NILl~~~~~vkL~DFGla~ 654 (783)
||||+++++|.+++... ...+++..++.++.||+.||.|||+.+ .+|+|+||||+|||++.++.+||+|||++.
T Consensus 85 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~ivH~dl~p~NIl~~~~~~~kl~dfg~~~ 164 (279)
T 2w5a_A 85 VMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLAR 164 (279)
T ss_dssp EEECCTTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHC------CCCCCSGGGEEECSSSCEEECCCCHHH
T ss_pred EEeCCCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHhcccCCCCeeEEeccchhhEEEcCCCCEEEecCchhe
Confidence 99999999999999753 234899999999999999999999975 239999999999999999999999999987
Q ss_pred ccccccccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhcccccccCCCCCCHH
Q 003963 655 LKHETYLTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPR 734 (783)
Q Consensus 655 ~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~ 734 (783)
.............|++.|+|||++.+..++.++|||||||++|+|++|..||...+.......+.. .....++..++++
T Consensus 165 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~i~~-~~~~~~~~~~~~~ 243 (279)
T 2w5a_A 165 ILNHDTSFAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIRE-GKFRRIPYRYSDE 243 (279)
T ss_dssp HC---CHHHHHHHSCCTTCCHHHHHCC-CCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHH-TCCCCCCTTSCHH
T ss_pred eeccccccccccCCCccccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCcccCHHHHHHHHhh-cccccCCcccCHH
Confidence 655432222344689999999999999999999999999999999999999998887766655532 2334667789999
Q ss_pred HHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhcCcC
Q 003963 735 WAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQASRS 773 (783)
Q Consensus 735 l~~LI~~cL~~dP~~RPsa~ell~~L~~L~~~~f~~~~~ 773 (783)
+.+||.+||..||.+||++.++ +.++|+.....
T Consensus 244 l~~li~~~l~~~p~~Rps~~~l------l~~~~~~~~~~ 276 (279)
T 2w5a_A 244 LNEIITRMLNLKDYHRPSVEEI------LENPLILEHHH 276 (279)
T ss_dssp HHHHHHHHTCSSGGGSCCHHHH------HTSTTCCGGGS
T ss_pred HHHHHHHHcCCCcccCCCHHHH------HhChhhhhhcc
Confidence 9999999999999999999999 55666665543
No 145
>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...
Probab=100.00 E-value=1.8e-41 Score=385.51 Aligned_cols=259 Identities=33% Similarity=0.587 Sum_probs=220.7
Q ss_pred ccccccccceeEeeeeccCCcEEEEEEEEeCCceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEeceeecCCc
Q 003963 498 LDYEILWEDLTIGEQIGQGSCGTVYHAVWYGSQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQR 577 (783)
Q Consensus 498 ~~~e~~~~~y~i~~~LG~G~fG~Vy~a~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~ 577 (783)
..+++..++|++.++||+|+||.||+|.+..+..||||++....... +.+.+|+.+|+.++||||+++++++.. +.
T Consensus 177 ~~~~i~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~---~~~~~E~~~l~~l~hp~iv~~~~~~~~-~~ 252 (452)
T 1fmk_A 177 DAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSP---EAFLQEAQVMKKLRHEKLVQLYAVVSE-EP 252 (452)
T ss_dssp TCSBCCGGGEEEEEEEEECSSCEEEEEEETTTEEEEEEECCTTSSCH---HHHHHHHHHHHHCCCTTBCCEEEEECS-SS
T ss_pred cccccChhHceeeeeecCCCCeEEEEEEECCCceEEEEEeccCCCCH---HHHHHHHHHHHhCCCCCEeeEEEEEcC-Cc
Confidence 34677889999999999999999999999887789999998665443 468899999999999999999999876 67
Q ss_pred eEEEEEecCCCCHHHHHhhc-CCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCccc
Q 003963 578 LCIVTEFLPRGSLFRLLQRN-TTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLK 656 (783)
Q Consensus 578 ~~lV~E~~~ggsL~~~L~~~-~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~ 656 (783)
+++||||+++|+|.+++... ...+++..++.++.||+.||+|||+++ |+||||||+||||+.++.+||+|||+++..
T Consensus 253 ~~iv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~--ivHrDlkp~Nill~~~~~~kl~DfG~a~~~ 330 (452)
T 1fmk_A 253 IYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMN--YVHRDLRAANILVGENLVCKVADFGLARLI 330 (452)
T ss_dssp CEEEECCCTTCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCSGGGEEECGGGCEEECCCCTTC--
T ss_pred eEEEehhhcCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC--eeCCCCChhhEEECCCCCEEECCCccceec
Confidence 89999999999999999753 345899999999999999999999998 999999999999999999999999999865
Q ss_pred ccccc-cccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCChHHHHHHhhcccccccCCCCCCHH
Q 003963 657 HETYL-TTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELAT-EKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPR 734 (783)
Q Consensus 657 ~~~~~-~~~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~ 734 (783)
..... ......+++.|+|||++.+..++.++|||||||+||||++ |..||......+....+. .....+.+..+++.
T Consensus 331 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~~~~~i~-~~~~~~~~~~~~~~ 409 (452)
T 1fmk_A 331 EDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVE-RGYRMPCPPECPES 409 (452)
T ss_dssp ------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHH-TTCCCCCCTTSCHH
T ss_pred CCCceecccCCcccccccCHhHHhcCCCCccccHHhHHHHHHHHHhCCCCCCCCCCHHHHHHHHH-cCCCCCCCCCCCHH
Confidence 43321 2223456789999999999999999999999999999999 999999988877776654 33456677889999
Q ss_pred HHHHHHHhhhhCCCCCCCHHHHHHHHHHH
Q 003963 735 WAAIVESCWHSDPQCRPSFQELVDKLRDL 763 (783)
Q Consensus 735 l~~LI~~cL~~dP~~RPsa~ell~~L~~L 763 (783)
+.+||.+||..||.+|||+.+|++.|+++
T Consensus 410 l~~li~~cl~~dP~~Rpt~~~l~~~L~~~ 438 (452)
T 1fmk_A 410 LHDLMCQCWRKEPEERPTFEYLQAFLEDY 438 (452)
T ss_dssp HHHHHHHHTCSSGGGSCCHHHHHHHHHTT
T ss_pred HHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence 99999999999999999999999887654
No 146
>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*
Probab=100.00 E-value=3.6e-42 Score=372.55 Aligned_cols=263 Identities=28% Similarity=0.446 Sum_probs=215.6
Q ss_pred cccccccceeEeeeeccCCcEEEEEEEEeCCceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEeceeecCCce
Q 003963 499 DYEILWEDLTIGEQIGQGSCGTVYHAVWYGSQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRL 578 (783)
Q Consensus 499 ~~e~~~~~y~i~~~LG~G~fG~Vy~a~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~ 578 (783)
+.+...++|++.+.||+|+||.||+|.+..++.||||++..... .....+.+|+.+++.++||||+++++++...+.+
T Consensus 33 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 110 (321)
T 2qkw_B 33 DLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESS--QGIEEFETEIETLSFCRHPHLVSLIGFCDERNEM 110 (321)
T ss_dssp CCCCCCCCCSCCCCSCBCSSSEEEEEECTTCCEEEEEECCSCCS--SHHHHHHHHHHGGGSCCCTTBCCEEEECCCTTCC
T ss_pred HHHHHHhccCccceeecCCCeeEEEEEECCCCEEEEEEecccCh--HHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCeE
Confidence 34456689999999999999999999987778999999876543 2356788999999999999999999999999999
Q ss_pred EEEEEecCCCCHHHHHhhcC---CcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCcc
Q 003963 579 CIVTEFLPRGSLFRLLQRNT---TKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRL 655 (783)
Q Consensus 579 ~lV~E~~~ggsL~~~L~~~~---~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~ 655 (783)
++||||+++++|.+++.... ..+++..++.++.||+.||.|||+++ |+||||||+|||++.++.+||+|||++..
T Consensus 111 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~--ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~ 188 (321)
T 2qkw_B 111 ILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTRA--IIHRDVKSINILLDENFVPKITDFGISKK 188 (321)
T ss_dssp EEEEECCTTCBTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHHHHTT--EECSCCCSTTEEECTTCCEEECCCTTCEE
T ss_pred EEEEEcCCCCcHHHHHhccCCCccccCHHHHHHHHHHHHHHHHHhcCCC--eecCCCCHHHEEECCCCCEEEeecccccc
Confidence 99999999999999996543 35899999999999999999999998 99999999999999999999999999976
Q ss_pred ccccc--ccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHH---HH---H-hhc--ccc-
Q 003963 656 KHETY--LTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQV---IG---A-VGF--MNQ- 723 (783)
Q Consensus 656 ~~~~~--~~~~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~elltG~~Pf~~~~~~~~---~~---~-i~~--~~~- 723 (783)
..... .......||+.|+|||++.+..++.++|||||||++|+|++|+.||........ .. . ... ...
T Consensus 189 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (321)
T 2qkw_B 189 GTELDQTHLSTVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQLEQI 268 (321)
T ss_dssp CSSSSCCCCBCCCEEETTTCCHHHHHHCBCCTHHHHHHHHHHHHHHHHCCTTCSCSSSSSCCCHHHHTHHHHTTTCCCSS
T ss_pred cccccccccccccCCCccccCHHHhcCCCCCcccchHhHHHHHHHHHhCCCcccccCcHHHHHHHHHhhhccccccHHHh
Confidence 44321 122234589999999999998999999999999999999999999965432211 00 0 000 000
Q ss_pred -cc----cCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHH
Q 003963 724 -RL----EIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQR 765 (783)
Q Consensus 724 -~~----~~~~~~s~~l~~LI~~cL~~dP~~RPsa~ell~~L~~L~~ 765 (783)
.. .++..++..+.++|.+||..||.+|||+.++++.|+.+.+
T Consensus 269 ~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~l~ 315 (321)
T 2qkw_B 269 VDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYALR 315 (321)
T ss_dssp SSSSCTTCSCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred cChhhccccCHHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHhh
Confidence 01 1222345678999999999999999999999999998764
No 147
>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*
Probab=100.00 E-value=6.8e-42 Score=371.45 Aligned_cols=259 Identities=27% Similarity=0.469 Sum_probs=217.2
Q ss_pred ccccceeEeeeeccCCcEEEEEEEEeCC-ce----EEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEeceeecCC
Q 003963 502 ILWEDLTIGEQIGQGSCGTVYHAVWYGS-QD----VAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQ 576 (783)
Q Consensus 502 ~~~~~y~i~~~LG~G~fG~Vy~a~~~~~-~~----vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~ 576 (783)
+..++|++.++||+|+||.||+|.+... +. ||+|++..... ......+.+|+.+++.++||||+++++++. ..
T Consensus 10 ~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~-~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~ 87 (325)
T 3kex_A 10 FKETELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSG-RQSFQAVTDHMLAIGSLDHAHIVRLLGLCP-GS 87 (325)
T ss_dssp CCTTTEEEEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTS-CSCBCSCCHHHHHHHTCCCTTBCCEEEEEC-BS
T ss_pred cCHhHceeeeeeeecCCceEEEEEEcCCCceEEEEEEEEecccccc-HHHHHHHHHHHHHHhcCCCCCcCeEEEEEc-CC
Confidence 3457899999999999999999998654 33 77787754322 122245667999999999999999999886 56
Q ss_pred ceEEEEEecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCccc
Q 003963 577 RLCIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLK 656 (783)
Q Consensus 577 ~~~lV~E~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~ 656 (783)
..++||||+.+|+|.+++......+++..++.++.||+.||+|||+++ |+||||||+||||+.++.+||+|||+++..
T Consensus 88 ~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~--ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~ 165 (325)
T 3kex_A 88 SLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYLEEHG--MVHRNLAARNVLLKSPSQVQVADFGVADLL 165 (325)
T ss_dssp SEEEEEECCTTCBSHHHHHSSGGGSCTTHHHHHHHHHHHHHHHHHHTT--CCCSCCSSTTEEESSSSCEEECSCSGGGGS
T ss_pred ccEEEEEeCCCCCHHHHHHHccccCCHHHHHHHHHHHHHHHHHHHhCC--CCCCccchheEEECCCCeEEECCCCccccc
Confidence 789999999999999999876667999999999999999999999998 999999999999999999999999999865
Q ss_pred ccccc--cccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCChHHHHHHhhcccccccCCCCCCH
Q 003963 657 HETYL--TTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELAT-EKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDP 733 (783)
Q Consensus 657 ~~~~~--~~~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~ 733 (783)
..... ......|++.|+|||++.+..++.++|||||||++|+|++ |..||...........+. .......+..+++
T Consensus 166 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 244 (325)
T 3kex_A 166 PPDDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLAEVPDLLE-KGERLAQPQICTI 244 (325)
T ss_dssp CCCTTCCC-----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCTTHHHHHHH-TTCBCCCCTTBCT
T ss_pred CcccccccccCCCCcccccChHHhccCCCChhhHhHHhHHHHHHHHhCCCCCccccCHHHHHHHHH-cCCCCCCCCcCcH
Confidence 43321 2234457889999999999999999999999999999999 999999887766665553 3345566777899
Q ss_pred HHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHH
Q 003963 734 RWAAIVESCWHSDPQCRPSFQELVDKLRDLQR 765 (783)
Q Consensus 734 ~l~~LI~~cL~~dP~~RPsa~ell~~L~~L~~ 765 (783)
++.+||.+||..||.+||++.++++.|+.+..
T Consensus 245 ~~~~li~~~l~~dp~~Rps~~el~~~l~~~~~ 276 (325)
T 3kex_A 245 DVYMVMVKCWMIDENIRPTFKELANEFTRMAR 276 (325)
T ss_dssp TTTHHHHHHTCSCTTTSCCHHHHHHHHHHHTT
T ss_pred HHHHHHHHHcCCChhhCcCHHHHHHHHHHHHh
Confidence 99999999999999999999999999988754
No 148
>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A
Probab=100.00 E-value=2.4e-41 Score=373.16 Aligned_cols=264 Identities=18% Similarity=0.239 Sum_probs=209.9
Q ss_pred cccccceeEeeeeccCCcEEEEEEEEeCC------ceEEEEEEecccCCHH----HH-----HHHHHHHHHHHhCCCCce
Q 003963 501 EILWEDLTIGEQIGQGSCGTVYHAVWYGS------QDVAVKVFSRQEYSDE----VI-----HSFRQEVSLMKRLRHPNV 565 (783)
Q Consensus 501 e~~~~~y~i~~~LG~G~fG~Vy~a~~~~~------~~vAiK~i~~~~~~~~----~~-----~~~~~Ei~il~~l~HpnI 565 (783)
++..++|++.++||+|+||.||+|.+..+ +.||||++........ .. ..+..|+..+..++||||
T Consensus 31 ~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~i 110 (364)
T 3op5_A 31 DMAAAAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGV 110 (364)
T ss_dssp CTTCCEEEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCS
T ss_pred ccCCCeEEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCC
Confidence 45567999999999999999999998653 5799999876532110 00 123345556677789999
Q ss_pred eeEeceeecC----CceEEEEEecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEc-
Q 003963 566 LLFMGAVTSP----QRLCIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVD- 640 (783)
Q Consensus 566 v~l~~~~~~~----~~~~lV~E~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~- 640 (783)
+++++++... ...||||||| +++|.+++......+++..++.++.||+.||+|||+++ |+||||||+||||+
T Consensus 111 v~~~~~~~~~~~~~~~~~lv~e~~-g~~L~~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~--iiHrDlkp~Nill~~ 187 (364)
T 3op5_A 111 PKYWGSGLHDKNGKSYRFMIMDRF-GSDLQKIYEANAKRFSRKTVLQLSLRILDILEYIHEHE--YVHGDIKASNLLLNY 187 (364)
T ss_dssp CCEEEEEEEEETTEEEEEEEEECE-EEEHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTT--EECCCCCGGGEEEES
T ss_pred CeEEeeeeeccCCcceEEEEEeCC-CCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCC--eEEecCCHHHEEEec
Confidence 9999998764 4589999999 99999999887678999999999999999999999998 99999999999999
Q ss_pred -CCCcEEEEecCCCccccccccc-------ccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChH
Q 003963 641 -KHWTVKVGDFGLSRLKHETYLT-------TKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSM 712 (783)
Q Consensus 641 -~~~~vkL~DFGla~~~~~~~~~-------~~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~elltG~~Pf~~~~~~ 712 (783)
.++.+||+|||+++........ .....||+.|+|||++.+..++.++|||||||+||+|++|+.||......
T Consensus 188 ~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~Pf~~~~~~ 267 (364)
T 3op5_A 188 KNPDQVYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWLTGHLPWEDNLKD 267 (364)
T ss_dssp SCTTCEEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGTTC
T ss_pred CCCCeEEEEECCcceecccCCcccccccCcccccCCCCCccCHHHhCCCCCCchhhHHHHHHHHHHHHhCCCCccccccC
Confidence 8899999999999765433211 12345999999999999999999999999999999999999999853222
Q ss_pred -HHHHHhhc--------ccccccCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHH
Q 003963 713 -QVIGAVGF--------MNQRLEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQY 767 (783)
Q Consensus 713 -~~~~~i~~--------~~~~~~~~~~~s~~l~~LI~~cL~~dP~~RPsa~ell~~L~~L~~~~ 767 (783)
........ .......+..+++++.+||..||..||.+||++.+|++.|+++....
T Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~RP~~~~l~~~l~~~~~~~ 331 (364)
T 3op5_A 268 PKYVRDSKIRYRENIASLMDKCFPAANAPGEIAKYMETVKLLDYTEKPLYENLRDILLQGLKAI 331 (364)
T ss_dssp HHHHHHHHHHHHHCHHHHHHHHSCTTCCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHhhhhHHHHHHHhcccccCHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHc
Confidence 21111100 00011123678999999999999999999999999999998887653
No 149
>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.8e-41 Score=371.60 Aligned_cols=261 Identities=23% Similarity=0.285 Sum_probs=213.3
Q ss_pred cccceeEeeeeccCCcEEEEEEEEeC-CceEEEEEEecccCCH---HHHHHHHHHHHHHHhCCCCceeeEeceeecCCce
Q 003963 503 LWEDLTIGEQIGQGSCGTVYHAVWYG-SQDVAVKVFSRQEYSD---EVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRL 578 (783)
Q Consensus 503 ~~~~y~i~~~LG~G~fG~Vy~a~~~~-~~~vAiK~i~~~~~~~---~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~ 578 (783)
..++|++.+.||+|+||.||+|.+.. ++.||||++....... .....+.+|+.+++.++||||+++++++.....+
T Consensus 8 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 87 (346)
T 1ua2_A 8 RAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSNI 87 (346)
T ss_dssp -----CEEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTCC
T ss_pred HhcccEEEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEeeCCce
Confidence 45789999999999999999999864 5789999987543221 2234678899999999999999999999999999
Q ss_pred EEEEEecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCccccc
Q 003963 579 CIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHE 658 (783)
Q Consensus 579 ~lV~E~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~~ 658 (783)
++||||+++ +|..++......+++..++.++.||+.||+|||+++ |+||||||+|||++.++.+||+|||++.....
T Consensus 88 ~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~--ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~~ 164 (346)
T 1ua2_A 88 SLVFDFMET-DLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQHW--ILHRDLKPNNLLLDENGVLKLADFGLAKSFGS 164 (346)
T ss_dssp EEEEECCSE-EHHHHHTTCCSSCCSSHHHHHHHHHHHHHHHHHHTT--CCCCCCCGGGEEECTTCCEEECCCGGGSTTTS
T ss_pred EEEEEcCCC-CHHHHHHhcCcCCCHHHHHHHHHHHHHHHHHHHHCC--EECCCCCHHHEEEcCCCCEEEEecccceeccC
Confidence 999999975 899999877777899999999999999999999999 99999999999999999999999999987655
Q ss_pred ccccccCCCCCCcccCcccccCC-CCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhcccccc------------
Q 003963 659 TYLTTKTGKGTPQWMAPEVLRNE-PSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRL------------ 725 (783)
Q Consensus 659 ~~~~~~~~~Gt~~Y~aPE~~~~~-~~s~~sDIwSLG~il~elltG~~Pf~~~~~~~~~~~i~~~~~~~------------ 725 (783)
.........||+.|+|||++.+. .++.++|||||||++|+|++|.+||...+....+..+.......
T Consensus 165 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 244 (346)
T 1ua2_A 165 PNRAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSLP 244 (346)
T ss_dssp CCCCCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTTTSSSTTSST
T ss_pred CcccCCcccccccccCchHhhCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHcCCCChhhhhhhccCc
Confidence 44444556789999999999764 47899999999999999999999999888766555442211100
Q ss_pred --------------cCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhcCc
Q 003963 726 --------------EIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQASR 772 (783)
Q Consensus 726 --------------~~~~~~s~~l~~LI~~cL~~dP~~RPsa~ell~~L~~L~~~~f~~~~ 772 (783)
.+...+++++.+||.+||..||.+|||+.++ |+|+||+...
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~el------l~h~~f~~~~ 299 (346)
T 1ua2_A 245 DYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQA------LKMKYFSNRP 299 (346)
T ss_dssp TCCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHH------HTSGGGTSSS
T ss_pred ccccccccCCCChHHhhccCCHHHHHHHHHHhccChhhCCCHHHH------hcChhhhcCC
Confidence 0114567899999999999999999999999 7899997654
No 150
>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*
Probab=100.00 E-value=2.7e-41 Score=357.50 Aligned_cols=252 Identities=21% Similarity=0.325 Sum_probs=213.5
Q ss_pred ccceeEeeeeccCCcEEEEEEEEe-CCceEEEEEEecccCCHHHHHHHHHHHHHHHhC-CCCceeeEeceeecCCceEEE
Q 003963 504 WEDLTIGEQIGQGSCGTVYHAVWY-GSQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRL-RHPNVLLFMGAVTSPQRLCIV 581 (783)
Q Consensus 504 ~~~y~i~~~LG~G~fG~Vy~a~~~-~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l-~HpnIv~l~~~~~~~~~~~lV 581 (783)
.++|++.+.||+|+||.||+|.+. .++.||||++............+.+|+.++..+ +||||+++++++...+.+++|
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~~~~~lv 89 (289)
T 1x8b_A 10 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDDHMLIQ 89 (289)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEETTEEEEE
T ss_pred cchhhhhhhhcCCCceEEEEEEEcCCCceEEEEEecccccccHHHHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEE
Confidence 468999999999999999999986 467899999987665555567888999999999 899999999999999999999
Q ss_pred EEecCCCCHHHHHhhcC---CcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcC-----------------
Q 003963 582 TEFLPRGSLFRLLQRNT---TKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDK----------------- 641 (783)
Q Consensus 582 ~E~~~ggsL~~~L~~~~---~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~----------------- 641 (783)
|||+++++|.+++.... ..+++..++.++.||+.||.|||+++ |+||||||+|||++.
T Consensus 90 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~--ivH~Dikp~NIl~~~~~~~~~~~~~~~~~~~~ 167 (289)
T 1x8b_A 90 NEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSMS--LVHMDIKPSNIFISRTSIPNAASEEGDEDDWA 167 (289)
T ss_dssp EECCTTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTT--EECSCCSGGGEEEC------------------
T ss_pred EEecCCCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHHhCC--EeecCCCHHHEEEcCCCCCccccccccccccc
Confidence 99999999999997542 45899999999999999999999998 999999999999984
Q ss_pred --CCcEEEEecCCCcccccccccccCCCCCCcccCcccccCC-CCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHh
Q 003963 642 --HWTVKVGDFGLSRLKHETYLTTKTGKGTPQWMAPEVLRNE-PSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAV 718 (783)
Q Consensus 642 --~~~vkL~DFGla~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~-~~s~~sDIwSLG~il~elltG~~Pf~~~~~~~~~~~i 718 (783)
...+||+|||++...... ....||+.|+|||++.+. .++.++|||||||++|+|++|.+|+........ +
T Consensus 168 ~~~~~~kl~Dfg~~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~~~---~ 240 (289)
T 1x8b_A 168 SNKVMFKIGDLGHVTRISSP----QVEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRNGDQWHE---I 240 (289)
T ss_dssp --CCCEEECCCTTCEETTCS----CCCCCCGGGCCHHHHTTCCTTHHHHHHHHHHHHHHHHTTCCCCCSSSHHHHH---H
T ss_pred CCceEEEEcccccccccCCc----cccCCCccccChhHhcCCCCCCchhhHHHHHHHHHHHhcCCCCCcchhHHHH---H
Confidence 447999999998765543 234689999999999876 566899999999999999999988765433222 2
Q ss_pred hcccccccCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhcC
Q 003963 719 GFMNQRLEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQAS 771 (783)
Q Consensus 719 ~~~~~~~~~~~~~s~~l~~LI~~cL~~dP~~RPsa~ell~~L~~L~~~~f~~~ 771 (783)
. ......++..+++++.+||.+||..||.+|||+.++ ++|+||+..
T Consensus 241 ~-~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~l------l~h~~~~~~ 286 (289)
T 1x8b_A 241 R-QGRLPRIPQVLSQEFTELLKVMIHPDPERRPSAMAL------VKHSVLLSA 286 (289)
T ss_dssp H-TTCCCCCSSCCCHHHHHHHHHHTCSSGGGSCCHHHH------HTCTTC---
T ss_pred H-cCCCCCCCcccCHHHHHHHHHHhCCCcccCCCHHHH------hhChHhhhh
Confidence 1 233456778899999999999999999999999999 788999764
No 151
>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*
Probab=100.00 E-value=2.3e-41 Score=357.21 Aligned_cols=260 Identities=25% Similarity=0.490 Sum_probs=215.8
Q ss_pred cccccceeEeeeeccCCcEEEEEEEEe-CCceEEEEEEecccCC-HHHHHHHHHHHHHHHhCCCCceeeEeceeecCCce
Q 003963 501 EILWEDLTIGEQIGQGSCGTVYHAVWY-GSQDVAVKVFSRQEYS-DEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRL 578 (783)
Q Consensus 501 e~~~~~y~i~~~LG~G~fG~Vy~a~~~-~~~~vAiK~i~~~~~~-~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~ 578 (783)
.+..++|++.+.||+|+||.||+|.+. .++.||||++...... ......+.+|+.+++.++||||+++++++...+..
T Consensus 7 ~~~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~ 86 (276)
T 2h6d_A 7 RVKIGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDF 86 (276)
T ss_dssp CCEETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEE
T ss_pred cceeccEEEEeeecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCeE
Confidence 345689999999999999999999986 4678999998764321 12345788999999999999999999999999999
Q ss_pred EEEEEecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCccccc
Q 003963 579 CIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHE 658 (783)
Q Consensus 579 ~lV~E~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~~ 658 (783)
++||||+++++|.+++... ..+++..++.++.||+.||.|||+++ |+|+||||+|||++.++.+||+|||++.....
T Consensus 87 ~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~--i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~ 163 (276)
T 2h6d_A 87 FMVMEYVSGGELFDYICKH-GRVEEMEARRLFQQILSAVDYCHRHM--VVHRDLKPENVLLDAHMNAKIADFGLSNMMSD 163 (276)
T ss_dssp EEEEECCCSCBHHHHHHHH-CSCCHHHHHHHHHHHHHHHHHHHHHC--SSCCCCCGGGEEECTTSCEEECCCCGGGCCCC
T ss_pred EEEEeccCCCcHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHHCC--CccCCCChhhEEECCCCCEEEeecccccccCC
Confidence 9999999999999999764 35899999999999999999999998 99999999999999999999999999876544
Q ss_pred ccccccCCCCCCcccCcccccCCCC-CchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhcccccccCCCCCCHHHHH
Q 003963 659 TYLTTKTGKGTPQWMAPEVLRNEPS-DEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAA 737 (783)
Q Consensus 659 ~~~~~~~~~Gt~~Y~aPE~~~~~~~-s~~sDIwSLG~il~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~l~~ 737 (783)
.. ......|++.|+|||++.+..+ +.++|||||||++|+|++|..||...........+. .....++..++..+.+
T Consensus 164 ~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~ 240 (276)
T 2h6d_A 164 GE-FLRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKKIR--GGVFYIPEYLNRSVAT 240 (276)
T ss_dssp --------------CCTGGGTTSCCCHHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHH--HCCCCCCTTSCHHHHH
T ss_pred Cc-ceecccCCccccCHHHHcCCCCCCccchHHHHHHHHHHHHhCCCCCCCCcHHHHHHHhh--cCcccCchhcCHHHHH
Confidence 32 2234568999999999988765 689999999999999999999999887776665553 2344567788999999
Q ss_pred HHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhcCc
Q 003963 738 IVESCWHSDPQCRPSFQELVDKLRDLQRQYFQASR 772 (783)
Q Consensus 738 LI~~cL~~dP~~RPsa~ell~~L~~L~~~~f~~~~ 772 (783)
||.+||+.||.+|||+.++ +.|+||+...
T Consensus 241 li~~~l~~~p~~Rps~~~~------l~h~~~~~~~ 269 (276)
T 2h6d_A 241 LLMHMLQVDPLKRATIKDI------REHEWFKQDL 269 (276)
T ss_dssp HHHHHTCSSGGGSCCHHHH------HHSHHHHTTC
T ss_pred HHHHHccCChhhCCCHHHH------HhChhhccCc
Confidence 9999999999999999999 6789997543
No 152
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}
Probab=100.00 E-value=4.5e-41 Score=387.41 Aligned_cols=261 Identities=27% Similarity=0.434 Sum_probs=220.5
Q ss_pred cccceeEeeeeccCCcEEEEEEEEeC-CceEEEEEEecccCCH-----------HHHHHHHHHHHHHHhCCCCceeeEec
Q 003963 503 LWEDLTIGEQIGQGSCGTVYHAVWYG-SQDVAVKVFSRQEYSD-----------EVIHSFRQEVSLMKRLRHPNVLLFMG 570 (783)
Q Consensus 503 ~~~~y~i~~~LG~G~fG~Vy~a~~~~-~~~vAiK~i~~~~~~~-----------~~~~~~~~Ei~il~~l~HpnIv~l~~ 570 (783)
..++|+++++||+|+||.||+|.+.. ++.||||++....... ...+.+.+|+.+|+.++|||||++++
T Consensus 34 i~~~Y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~ 113 (504)
T 3q5i_A 34 IGESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFD 113 (504)
T ss_dssp GGGTEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCEEE
T ss_pred cccceEEEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeEEE
Confidence 45789999999999999999999865 4679999997654321 23467889999999999999999999
Q ss_pred eeecCCceEEEEEecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCC---cEEE
Q 003963 571 AVTSPQRLCIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHW---TVKV 647 (783)
Q Consensus 571 ~~~~~~~~~lV~E~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~---~vkL 647 (783)
++.....+|+|||||++|+|.+++... ..+++..++.++.||+.||.|||+++ |+||||||+|||++.++ .+||
T Consensus 114 ~~~~~~~~~lv~e~~~gg~L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~--ivH~Dlkp~Nil~~~~~~~~~~kl 190 (504)
T 3q5i_A 114 VFEDKKYFYLVTEFYEGGELFEQIINR-HKFDECDAANIMKQILSGICYLHKHN--IVHRDIKPENILLENKNSLLNIKI 190 (504)
T ss_dssp EEECSSEEEEEEECCTTCBHHHHHHHH-SCCCHHHHHHHHHHHHHHHHHHHHTT--EECSCCSGGGEEESSTTCCSSEEE
T ss_pred EEEcCCEEEEEEecCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCC--eEeCCCcHHHEEEecCCCCccEEE
Confidence 999999999999999999999998764 46999999999999999999999998 99999999999998775 6999
Q ss_pred EecCCCcccccccccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccccccc-
Q 003963 648 GDFGLSRLKHETYLTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLE- 726 (783)
Q Consensus 648 ~DFGla~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~elltG~~Pf~~~~~~~~~~~i~~~~~~~~- 726 (783)
+|||++....... .....+||+.|+|||++.+ .++.++|||||||++|+|++|.+||...+....+..+........
T Consensus 191 ~Dfg~a~~~~~~~-~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~ 268 (504)
T 3q5i_A 191 VDFGLSSFFSKDY-KLRDRLGTAYYIAPEVLKK-KYNEKCDVWSCGVIMYILLCGYPPFGGQNDQDIIKKVEKGKYYFDF 268 (504)
T ss_dssp CCCTTCEECCTTS-CBCCCCSCTTTCCHHHHTT-CBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCH
T ss_pred EECCCCEEcCCCC-ccccccCCcCCCCHHHhcc-CCCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCCc
Confidence 9999998665443 2345679999999999875 589999999999999999999999999988887777654332222
Q ss_pred -CCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhcCcCC
Q 003963 727 -IPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQASRST 774 (783)
Q Consensus 727 -~~~~~s~~l~~LI~~cL~~dP~~RPsa~ell~~L~~L~~~~f~~~~~~ 774 (783)
.+..+++++.+||.+||..||.+|||+.++ |+|+||+.....
T Consensus 269 ~~~~~~s~~~~~li~~~L~~dp~~R~t~~e~------l~h~~~~~~~~~ 311 (504)
T 3q5i_A 269 NDWKNISDEAKELIKLMLTYDYNKRCTAEEA------LNSRWIKKYANN 311 (504)
T ss_dssp HHHTTSCHHHHHHHHHHTCSSTTTSCCHHHH------HTSHHHHHTCCC
T ss_pred cccCCCCHHHHHHHHHHcCCChhHCCCHHHH------hcCHhhhhchhc
Confidence 225789999999999999999999999999 678999776544
No 153
>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C
Probab=100.00 E-value=4.6e-41 Score=376.18 Aligned_cols=255 Identities=24% Similarity=0.363 Sum_probs=202.4
Q ss_pred ccccceeEe-eeeccCCcEEEEEEEEeC-CceEEEEEEecccCCHHHHHHHHHHHHHHH-hCCCCceeeEeceeec----
Q 003963 502 ILWEDLTIG-EQIGQGSCGTVYHAVWYG-SQDVAVKVFSRQEYSDEVIHSFRQEVSLMK-RLRHPNVLLFMGAVTS---- 574 (783)
Q Consensus 502 ~~~~~y~i~-~~LG~G~fG~Vy~a~~~~-~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~-~l~HpnIv~l~~~~~~---- 574 (783)
...++|.+. ++||+|+||.||++.+.. ++.||||++... ..+.+|+.++. .++||||+++++++..
T Consensus 58 ~~~~~y~~~~~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~~-------~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~~ 130 (400)
T 1nxk_A 58 AIIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC-------PKARREVELHWRASQCPHIVRIVDVYENLYAG 130 (400)
T ss_dssp CGGGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS-------HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETT
T ss_pred cccccceeccceeeeccCeEEEEEEECCCCCEEEEEEeCcc-------hhHHHHHHHHHHhcCCCCcceEeEEEeecccC
Confidence 345778887 789999999999999865 567999998642 24567888874 5589999999998875
Q ss_pred CCceEEEEEecCCCCHHHHHhhcC-CcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcC---CCcEEEEec
Q 003963 575 PQRLCIVTEFLPRGSLFRLLQRNT-TKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDK---HWTVKVGDF 650 (783)
Q Consensus 575 ~~~~~lV~E~~~ggsL~~~L~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~---~~~vkL~DF 650 (783)
...+|||||||+||+|.+++.... ..+++..++.++.||+.||.|||+++ |+||||||+||||+. ++.+||+||
T Consensus 131 ~~~~~lv~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~--ivHrDlkp~Nill~~~~~~~~~kl~DF 208 (400)
T 1nxk_A 131 RKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSIN--IAHRDVKPENLLYTSKRPNAILKLTDF 208 (400)
T ss_dssp EEEEEEEEECCCSEEHHHHHHCC---CCBHHHHHHHHHHHHHHHHHHHHTT--EECCCCCGGGEEESSSSTTCCEEECCC
T ss_pred CcEEEEEEEeCCCCcHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCC--ccccCcCcceEEEecCCCCccEEEEec
Confidence 567899999999999999997643 45899999999999999999999998 999999999999987 789999999
Q ss_pred CCCcccccccccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHH----HHHHhhcccccc-
Q 003963 651 GLSRLKHETYLTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQ----VIGAVGFMNQRL- 725 (783)
Q Consensus 651 Gla~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~elltG~~Pf~~~~~~~----~~~~i~~~~~~~- 725 (783)
|+++...... .....+||+.|+|||++.+..++.++|||||||+||+|++|..||....... ....+.......
T Consensus 209 G~a~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~i~~~~~~~~ 287 (400)
T 1nxk_A 209 GFAKETTSHN-SLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFP 287 (400)
T ss_dssp TTCEECC------------CTTCCGGGSCCCCSSSHHHHHHHHHHHHHHHHSSCSCCCCTTCSSCCSHHHHHHHTCCCCC
T ss_pred ccccccCCCC-ccccCCCCCCccCHhhcCCCCCCCcccHHHHHHHHHHHHhCCCCCCCCccccccHHHHHHHHcCcccCC
Confidence 9998654332 2335678999999999999999999999999999999999999997654321 122222111111
Q ss_pred -cCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhcCc
Q 003963 726 -EIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQASR 772 (783)
Q Consensus 726 -~~~~~~s~~l~~LI~~cL~~dP~~RPsa~ell~~L~~L~~~~f~~~~ 772 (783)
.....+++++.+||.+||..||.+|||+.++ +.|+||+...
T Consensus 288 ~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~ei------l~hp~~~~~~ 329 (400)
T 1nxk_A 288 NPEWSEVSEEVKMLIRNLLKTEPTQRMTITEF------MNHPWIMQST 329 (400)
T ss_dssp TTTTTTSCHHHHHHHHTTSCSSGGGSCCHHHH------HHSHHHHTTT
T ss_pred CcccccCCHHHHHHHHHHCCCChhHCcCHHHH------hcCccccCCC
Confidence 2225689999999999999999999999999 6789997543
No 154
>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*
Probab=100.00 E-value=3.7e-41 Score=365.63 Aligned_cols=265 Identities=29% Similarity=0.552 Sum_probs=222.0
Q ss_pred ccccceeEeeeeccCCcEEEEEEEEeCC-ce--EEEEEEecccCCHHHHHHHHHHHHHHHhC-CCCceeeEeceeecCCc
Q 003963 502 ILWEDLTIGEQIGQGSCGTVYHAVWYGS-QD--VAVKVFSRQEYSDEVIHSFRQEVSLMKRL-RHPNVLLFMGAVTSPQR 577 (783)
Q Consensus 502 ~~~~~y~i~~~LG~G~fG~Vy~a~~~~~-~~--vAiK~i~~~~~~~~~~~~~~~Ei~il~~l-~HpnIv~l~~~~~~~~~ 577 (783)
+.+++|++.+.||+|+||.||+|.+... .. +++|++.... .......+.+|+.+++.+ +||||+++++++...+.
T Consensus 22 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~-~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~ 100 (327)
T 1fvr_A 22 LDWNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYA-SKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGY 100 (327)
T ss_dssp CCGGGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC-------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTE
T ss_pred ccHHHccceeeeecCCCceEEEEEEccCCcccceeeeeecccc-chHHHHHHHHHHHHHHhccCCCchhhhceeeeeCCc
Confidence 4458999999999999999999998654 33 5999887533 334456788999999999 89999999999999999
Q ss_pred eEEEEEecCCCCHHHHHhhcC---------------CcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCC
Q 003963 578 LCIVTEFLPRGSLFRLLQRNT---------------TKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKH 642 (783)
Q Consensus 578 ~~lV~E~~~ggsL~~~L~~~~---------------~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~ 642 (783)
+|+||||+++++|.+++.... ..+++..++.++.||+.||.|||+++ |+||||||+||||+.+
T Consensus 101 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~--ivH~dlkp~NIl~~~~ 178 (327)
T 1fvr_A 101 LYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQ--FIHRDLAARNILVGEN 178 (327)
T ss_dssp EEEEECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHTT--EECSCCSGGGEEECGG
T ss_pred eEEEEecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCC--ccCCCCccceEEEcCC
Confidence 999999999999999997643 36899999999999999999999998 9999999999999999
Q ss_pred CcEEEEecCCCcccccccccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCChHHHHHHhhcc
Q 003963 643 WTVKVGDFGLSRLKHETYLTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELAT-EKIPWDNLNSMQVIGAVGFM 721 (783)
Q Consensus 643 ~~vkL~DFGla~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~ellt-G~~Pf~~~~~~~~~~~i~~~ 721 (783)
+.+||+|||++...... .......+++.|+|||++.+..++.++|||||||++|+|++ |..||...+.......+..
T Consensus 179 ~~~kL~Dfg~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~~~~~~~~~- 256 (327)
T 1fvr_A 179 YVAKIADFGLSRGQEVY-VKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQ- 256 (327)
T ss_dssp GCEEECCTTCEESSCEE-CCC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHGGG-
T ss_pred CeEEEcccCcCcccccc-ccccCCCCCccccChhhhccccCCchhcchHHHHHHHHHHcCCCCCCCCCcHHHHHHHhhc-
Confidence 99999999998743322 22234457889999999998889999999999999999998 9999999888777665532
Q ss_pred cccccCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhcC
Q 003963 722 NQRLEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQAS 771 (783)
Q Consensus 722 ~~~~~~~~~~s~~l~~LI~~cL~~dP~~RPsa~ell~~L~~L~~~~f~~~ 771 (783)
......+..+++.+.+||.+||..||.+||++.++++.|.++........
T Consensus 257 ~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~~~~~ 306 (327)
T 1fvr_A 257 GYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLEERKTYV 306 (327)
T ss_dssp TCCCCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSSSCSB
T ss_pred CCCCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhhcCcc
Confidence 23455677899999999999999999999999999999998877654333
No 155
>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*
Probab=100.00 E-value=1.5e-41 Score=394.17 Aligned_cols=259 Identities=23% Similarity=0.323 Sum_probs=221.0
Q ss_pred ccccceeEeeeeccCCcEEEEEEEEeC-CceEEEEEEecccCCH-HHHHHHHHHHHHHHhCCCCceeeEeceeecCCceE
Q 003963 502 ILWEDLTIGEQIGQGSCGTVYHAVWYG-SQDVAVKVFSRQEYSD-EVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLC 579 (783)
Q Consensus 502 ~~~~~y~i~~~LG~G~fG~Vy~a~~~~-~~~vAiK~i~~~~~~~-~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~ 579 (783)
+..++|++.+.||+|+||.||+|.+.. ++.||||++.+..... .....+.+|+.+|+.++|||||++++++...+.+|
T Consensus 181 ~~~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~ 260 (576)
T 2acx_A 181 VTKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALC 260 (576)
T ss_dssp CCGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred ccccceEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCEeeEEEEEeeCCEEE
Confidence 445789999999999999999999864 5789999997643211 22356788999999999999999999999999999
Q ss_pred EEEEecCCCCHHHHHhhcC-CcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCccccc
Q 003963 580 IVTEFLPRGSLFRLLQRNT-TKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHE 658 (783)
Q Consensus 580 lV~E~~~ggsL~~~L~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~~ 658 (783)
+|||||+||+|.+++.... ..+++..++.++.||+.||.|||+++ ||||||||+||||+.++.+||+|||+++....
T Consensus 261 lVmEy~~gg~L~~~l~~~~~~~l~e~~~~~i~~qIl~aL~yLH~~g--IvHrDLKPeNILld~~g~vKL~DFGla~~~~~ 338 (576)
T 2acx_A 261 LVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRER--IVYRDLKPENILLDDHGHIRISDLGLAVHVPE 338 (576)
T ss_dssp EEECCCCSCBHHHHHHSSSSCCCCHHHHHHHHHHHHHHHHHHHHTT--EECCCCCGGGEEECTTSCEEECCCTTCEECCT
T ss_pred EEEEcCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCC--EeccCCchheEEEeCCCCeEEEecccceeccc
Confidence 9999999999999997643 34899999999999999999999998 99999999999999999999999999986654
Q ss_pred ccccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCC----hHHHHHHhhcccccccCCCCCCHH
Q 003963 659 TYLTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLN----SMQVIGAVGFMNQRLEIPKDVDPR 734 (783)
Q Consensus 659 ~~~~~~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~elltG~~Pf~~~~----~~~~~~~i~~~~~~~~~~~~~s~~ 734 (783)
.. .....+||+.|+|||++.+..++.++|||||||++|+|++|.+||.... .......+ ......++..++++
T Consensus 339 ~~-~~~~~~GT~~Y~APEvl~~~~~~~~~DiwSLGvilyeLltG~~PF~~~~~~~~~~~i~~~i--~~~~~~~p~~~s~~ 415 (576)
T 2acx_A 339 GQ-TIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLV--KEVPEEYSERFSPQ 415 (576)
T ss_dssp TC-CEECCCSCGGGCCHHHHTTCEESSHHHHHHHHHHHHHHHHSSCSSSCSSSCCCHHHHHHHH--HHCCCCCCTTSCHH
T ss_pred Cc-cccccCCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCcccccchhHHHHHHHh--hcccccCCccCCHH
Confidence 32 2235689999999999999999999999999999999999999997653 23333333 22345567889999
Q ss_pred HHHHHHHhhhhCCCCCC-----CHHHHHHHHHHHHHHHhhcC
Q 003963 735 WAAIVESCWHSDPQCRP-----SFQELVDKLRDLQRQYFQAS 771 (783)
Q Consensus 735 l~~LI~~cL~~dP~~RP-----sa~ell~~L~~L~~~~f~~~ 771 (783)
+.+||.+||..||.+|| ++.++ ++|+||+.+
T Consensus 416 ~~dLI~~lL~~dP~~R~g~~~~sa~ei------l~HpfF~~i 451 (576)
T 2acx_A 416 ARSLCSQLLCKDPAERLGCRGGSAREV------KEHPLFKKL 451 (576)
T ss_dssp HHHHHHHHTCSSGGGSTTCSSSHHHHH------HTSGGGTTC
T ss_pred HHHHHHHhccCCHHHcCCCCCCCHHHH------HhChhhccC
Confidence 99999999999999999 78888 678999764
No 156
>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...
Probab=100.00 E-value=2.5e-41 Score=361.23 Aligned_cols=262 Identities=25% Similarity=0.365 Sum_probs=215.9
Q ss_pred ccceeEeeeeccCCcEEEEEEEEe-CCceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEeceeecCCceEEEE
Q 003963 504 WEDLTIGEQIGQGSCGTVYHAVWY-GSQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIVT 582 (783)
Q Consensus 504 ~~~y~i~~~LG~G~fG~Vy~a~~~-~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lV~ 582 (783)
.++|++.+.||+|+||.||+|.+. .++.||||++............+.+|+.+++.++||||+++++++...+.+|+||
T Consensus 2 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 81 (299)
T 2r3i_A 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVF 81 (299)
T ss_dssp CTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC--------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred cchhhhhhhhccCCCeeEEEEEEcCCCceEEEEEeecCccchhhHHHHHHHHHHHHHcCCCCeeeEEEEEecCCceEEEE
Confidence 468999999999999999999986 4578999998765544444467889999999999999999999999999999999
Q ss_pred EecCCCCHHHHHhhcC-CcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCcccccccc
Q 003963 583 EFLPRGSLFRLLQRNT-TKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETYL 661 (783)
Q Consensus 583 E~~~ggsL~~~L~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~~ 661 (783)
||+. ++|.+++.... ..+++..++.++.||+.||.|||++| |+|+||||+|||++.++.+||+|||++........
T Consensus 82 e~~~-~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~--i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~~ 158 (299)
T 2r3i_A 82 EFLH-QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR 158 (299)
T ss_dssp ECCS-EEHHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTT--CCCCCCCGGGEEECTTSCEEECSTTHHHHHCCCSB
T ss_pred Eccc-CCHHHHHHhhhccCCCHHHHHHHHHHHHHHHHHHHHCC--ccCCCCCHHHeEEcCCCCEEECcchhhhhccCCcc
Confidence 9996 59999987643 45889999999999999999999998 99999999999999999999999999876554433
Q ss_pred cccCCCCCCcccCcccccCCC-CCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccccc----------------
Q 003963 662 TTKTGKGTPQWMAPEVLRNEP-SDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQR---------------- 724 (783)
Q Consensus 662 ~~~~~~Gt~~Y~aPE~~~~~~-~s~~sDIwSLG~il~elltG~~Pf~~~~~~~~~~~i~~~~~~---------------- 724 (783)
......||+.|+|||++.+.. ++.++|||||||++|+|++|..||...+.......+......
T Consensus 159 ~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (299)
T 2r3i_A 159 TYTHEVVTLWYRAPEILLGAKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYK 238 (299)
T ss_dssp CTTSCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTCC
T ss_pred ccCcccccccccCcHHhhccccCChHHHHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHHHhCCCchhhhhHhhcCcccc
Confidence 344557899999999998765 799999999999999999999999988776655443211100
Q ss_pred ccC-----------CCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhcCcCC
Q 003963 725 LEI-----------PKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQASRST 774 (783)
Q Consensus 725 ~~~-----------~~~~s~~l~~LI~~cL~~dP~~RPsa~ell~~L~~L~~~~f~~~~~~ 774 (783)
..+ ...++.++.+||.+||..||.+|||+.++ +.|+||+.....
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~~------l~hp~~~~~~~~ 293 (299)
T 2r3i_A 239 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAA------LAHPFFQDVTKP 293 (299)
T ss_dssp TTSCCCCCCCHHHHSTTCCHHHHHHHHHHTCSSTTTSCCHHHH------HTSGGGTTCCCC
T ss_pred hhhhcccchhhHhhCCCCCHHHHHHHHHhcCcCcccCCCHHHH------hcChhhhcCCCC
Confidence 001 13478999999999999999999999999 679999876654
No 157
>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*
Probab=100.00 E-value=2.7e-41 Score=357.72 Aligned_cols=259 Identities=32% Similarity=0.597 Sum_probs=216.1
Q ss_pred cccccccceeEeeeeccCCcEEEEEEEEeCCceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEeceeecC-Cc
Q 003963 499 DYEILWEDLTIGEQIGQGSCGTVYHAVWYGSQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSP-QR 577 (783)
Q Consensus 499 ~~e~~~~~y~i~~~LG~G~fG~Vy~a~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~-~~ 577 (783)
.+.+..++|++.+.||+|+||.||++.+. ++.||||++.... ..+.+.+|+.+++.++||||+++++++... +.
T Consensus 15 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~----~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 89 (278)
T 1byg_A 15 GWALNMKELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA----TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGG 89 (278)
T ss_dssp CCBCCGGGEEEEEEEEECSSCEEEEEEET-TEEEEEEECCCCC------HHHHHTHHHHTTCCCTTBCCEEEEECCC--C
T ss_pred cccCChhhceEEeEEecCCCceEEEEEEc-CCEEEEEEecchh----HHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCCc
Confidence 34566789999999999999999999875 6689999987543 245788999999999999999999986544 57
Q ss_pred eEEEEEecCCCCHHHHHhhcCC-cchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCccc
Q 003963 578 LCIVTEFLPRGSLFRLLQRNTT-KLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLK 656 (783)
Q Consensus 578 ~~lV~E~~~ggsL~~~L~~~~~-~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~ 656 (783)
+++||||+++++|.+++..... .+++..++.++.||+.||.|||+++ |+|+||||+|||++.++.+||+|||++...
T Consensus 90 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~--i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~ 167 (278)
T 1byg_A 90 LYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNN--FVHRDLAARNVLVSEDNVAKVSDFGLTKEA 167 (278)
T ss_dssp CEEEECCCTTEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCSGGGEEECTTSCEEECCCCC----
T ss_pred eEEEEecCCCCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHhCC--ccccCCCcceEEEeCCCcEEEeeccccccc
Confidence 9999999999999999976432 3788999999999999999999998 999999999999999999999999998755
Q ss_pred ccccccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCChHHHHHHhhcccccccCCCCCCHHH
Q 003963 657 HETYLTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELAT-EKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRW 735 (783)
Q Consensus 657 ~~~~~~~~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~l 735 (783)
.... ....+++.|+|||++.+..++.++|||||||++|+|++ |..||...+.......+. .......+..+++.+
T Consensus 168 ~~~~---~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l 243 (278)
T 1byg_A 168 SSTQ---DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVE-KGYKMDAPDGCPPAV 243 (278)
T ss_dssp -----------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGGGHHHHHT-TTCCCCCCTTCCHHH
T ss_pred cccc---cCCCccccccCHHHhCCCCCCchhcHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHh-cCCCCCCcccCCHHH
Confidence 4332 23457889999999999999999999999999999998 999999887766665553 223456778899999
Q ss_pred HHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHh
Q 003963 736 AAIVESCWHSDPQCRPSFQELVDKLRDLQRQYF 768 (783)
Q Consensus 736 ~~LI~~cL~~dP~~RPsa~ell~~L~~L~~~~f 768 (783)
.++|.+||..||.+||++.++++.|+.++...+
T Consensus 244 ~~li~~~l~~~p~~Rps~~~l~~~L~~i~~~~~ 276 (278)
T 1byg_A 244 YEVMKNCWHLDAAMRPSFLQLREQLEHIKTHEL 276 (278)
T ss_dssp HHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHCC
T ss_pred HHHHHHHhcCChhhCCCHHHHHHHHHHHHhhhc
Confidence 999999999999999999999999999877643
No 158
>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*
Probab=100.00 E-value=5.3e-41 Score=359.94 Aligned_cols=256 Identities=31% Similarity=0.524 Sum_probs=223.6
Q ss_pred ccceeEeeeeccCCcEEEEEEEEeC-CceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEeceeecCCceEEEE
Q 003963 504 WEDLTIGEQIGQGSCGTVYHAVWYG-SQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIVT 582 (783)
Q Consensus 504 ~~~y~i~~~LG~G~fG~Vy~a~~~~-~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lV~ 582 (783)
.+.|++.+.||+|+||.||+|.+.. ++.||||++...... .....+.+|+.+++.++||||+++++++.....+|+||
T Consensus 21 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 99 (303)
T 3a7i_A 21 EELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAE-DEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIM 99 (303)
T ss_dssp GGTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEETTTCS-TTHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred HHHHHHhhhhcccCCeEEEEEEECCCCcEEEEEEecccccH-HHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEE
Confidence 4679999999999999999999754 568999999765433 23567889999999999999999999999999999999
Q ss_pred EecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCccccccccc
Q 003963 583 EFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETYLT 662 (783)
Q Consensus 583 E~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~~~ 662 (783)
||+++++|.+++.. ..+++..++.++.||+.||.|||+++ |+|+||||+|||++.++.+||+|||++.........
T Consensus 100 e~~~~~~L~~~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~--i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~~~~ 175 (303)
T 3a7i_A 100 EYLGGGSALDLLEP--GPLDETQIATILREILKGLDYLHSEK--KIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIK 175 (303)
T ss_dssp ECCTTEEHHHHHTT--SCCCHHHHHHHHHHHHHHHHHHHHTT--EECCCCSGGGEEECTTSCEEECCCTTCEECBTTBCC
T ss_pred EeCCCCcHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCC--CccCCCChheEEECCCCCEEEeecccceecCccccc
Confidence 99999999999975 45899999999999999999999998 999999999999999999999999999876554444
Q ss_pred ccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhcccccccCCCCCCHHHHHHHHHh
Q 003963 663 TKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAAIVESC 742 (783)
Q Consensus 663 ~~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~l~~LI~~c 742 (783)
.....|++.|+|||++.+..++.++|||||||++|+|++|..||...........+.. .....++..++..+.+||.+|
T Consensus 176 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~li~~~ 254 (303)
T 3a7i_A 176 RNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPK-NNPPTLEGNYSKPLKEFVEAC 254 (303)
T ss_dssp BCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHH-SCCCCCCSSCCHHHHHHHHHH
T ss_pred cCccCCCcCccCHHHHhcCCCCchhhhHHHHHHHHHHccCCCCCCCcCHHHHHHHhhc-CCCCCCccccCHHHHHHHHHH
Confidence 4566799999999999999999999999999999999999999998887766655432 234456778999999999999
Q ss_pred hhhCCCCCCCHHHHHHHHHHHHHHHhhcC
Q 003963 743 WHSDPQCRPSFQELVDKLRDLQRQYFQAS 771 (783)
Q Consensus 743 L~~dP~~RPsa~ell~~L~~L~~~~f~~~ 771 (783)
|..||.+|||+.++ ++|+||+..
T Consensus 255 l~~dp~~Rps~~~l------l~~~~~~~~ 277 (303)
T 3a7i_A 255 LNKEPSFRPTAKEL------LKHKFILRN 277 (303)
T ss_dssp CCSSGGGSCCHHHH------TTCHHHHHH
T ss_pred cCCChhhCcCHHHH------hhChhhhcC
Confidence 99999999999999 567777544
No 159
>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}
Probab=100.00 E-value=3.3e-41 Score=366.84 Aligned_cols=260 Identities=27% Similarity=0.513 Sum_probs=215.7
Q ss_pred ccccceeEeeeeccCCcEEEEEEEEeCC-ce----EEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEeceeecCC
Q 003963 502 ILWEDLTIGEQIGQGSCGTVYHAVWYGS-QD----VAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQ 576 (783)
Q Consensus 502 ~~~~~y~i~~~LG~G~fG~Vy~a~~~~~-~~----vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~ 576 (783)
+..++|++.++||+|+||.||+|.+... +. |++|.+.... .......+.+|+.+++.++||||+++++++....
T Consensus 12 l~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~-~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~ 90 (327)
T 3lzb_A 12 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT-SPKANKEILDEAYVMASVDNPHVCRLLGICLTST 90 (327)
T ss_dssp CCTTTEEEEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCS-SCCCHHHHHHHHHHHTTCCBTTBCCCCEEEESSS
T ss_pred cCHhHceEEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeecccc-CHHHHHHHHHHHHHHHhCCCCCeeEEEEEEecCC
Confidence 4457899999999999999999997643 33 5777665433 2233467889999999999999999999998754
Q ss_pred ceEEEEEecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCccc
Q 003963 577 RLCIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLK 656 (783)
Q Consensus 577 ~~~lV~E~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~ 656 (783)
.++||||+.+++|.+++......+++..++.++.||+.||.|||+++ |+||||||+||||+.++.+||+|||+++..
T Consensus 91 -~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~--ivH~Dikp~NIl~~~~~~~kL~DfG~a~~~ 167 (327)
T 3lzb_A 91 -VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRR--LVHRDLAARNVLVKTPQHVKITDFGLAKLL 167 (327)
T ss_dssp -EEEEECCCSSCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCCGGGEEEEETTEEEECCTTC----
T ss_pred -ceEEEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhCC--CcCCCCCHHHEEEcCCCCEEEccCcceeEc
Confidence 88999999999999999887778999999999999999999999998 999999999999999999999999999865
Q ss_pred ccccc--cccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCChHHHHHHhhcccccccCCCCCCH
Q 003963 657 HETYL--TTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELAT-EKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDP 733 (783)
Q Consensus 657 ~~~~~--~~~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~ 733 (783)
..... ......+|+.|+|||++.+..++.++|||||||++|+|++ |..||...........+. .......+..+++
T Consensus 168 ~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 246 (327)
T 3lzb_A 168 GAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILE-KGERLPQPPICTI 246 (327)
T ss_dssp ------------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHH-TTCCCCCCTTBCH
T ss_pred cCccccccccCCCccccccCHHHHcCCCCChHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHH-cCCCCCCCccCCH
Confidence 43221 2223456889999999999999999999999999999999 999999888776665543 3345667788999
Q ss_pred HHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHH
Q 003963 734 RWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQ 766 (783)
Q Consensus 734 ~l~~LI~~cL~~dP~~RPsa~ell~~L~~L~~~ 766 (783)
++.+||.+||..||.+||++.++++.|+++...
T Consensus 247 ~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~ 279 (327)
T 3lzb_A 247 DVYMIMRKCWMIDADSRPKFRELIIEFSKMARD 279 (327)
T ss_dssp HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHTS
T ss_pred HHHHHHHHHcCCChhHCcCHHHHHHHHHHHHhC
Confidence 999999999999999999999999999988743
No 160
>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*
Probab=100.00 E-value=4e-41 Score=365.32 Aligned_cols=269 Identities=30% Similarity=0.433 Sum_probs=217.5
Q ss_pred cccceeEeeeeccCCcEEEEEEEE-----eCCceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEeceee--cC
Q 003963 503 LWEDLTIGEQIGQGSCGTVYHAVW-----YGSQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVT--SP 575 (783)
Q Consensus 503 ~~~~y~i~~~LG~G~fG~Vy~a~~-----~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~--~~ 575 (783)
..++|++.++||+|+||.||+|.+ ..++.||||++... .....+.+.+|+.+++.++||||+++++++. ..
T Consensus 21 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~ 98 (327)
T 3lxl_A 21 EERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHS--GPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGR 98 (327)
T ss_dssp CGGGEEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSC--CHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSS
T ss_pred chhhhhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccC--CHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCC
Confidence 357999999999999999999985 23567999998754 3455677899999999999999999999886 45
Q ss_pred CceEEEEEecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCcc
Q 003963 576 QRLCIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRL 655 (783)
Q Consensus 576 ~~~~lV~E~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~ 655 (783)
..+|+||||+++++|.+++......+++..++.++.||+.||+|||+++ |+||||||+||||+.++.+||+|||++..
T Consensus 99 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~--ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~ 176 (327)
T 3lxl_A 99 QSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRR--CVHRDLAARNILVESEAHVKIADFGLAKL 176 (327)
T ss_dssp CEEEEEEECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHTT--EECSCCSGGGEEEEETTEEEECCGGGCEE
T ss_pred ceEEEEEeecCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCC--ccCCCCChhhEEECCCCCEEEccccccee
Confidence 6689999999999999999876667999999999999999999999998 99999999999999999999999999986
Q ss_pred cccccc---cccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChH--------------HHHHHh
Q 003963 656 KHETYL---TTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSM--------------QVIGAV 718 (783)
Q Consensus 656 ~~~~~~---~~~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~elltG~~Pf~~~~~~--------------~~~~~i 718 (783)
...... ......||+.|+|||++.+..++.++|||||||++|+|++|..||...... ......
T Consensus 177 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (327)
T 3lxl_A 177 LPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERDVPALSRLLEL 256 (327)
T ss_dssp CCTTCSEEECSSCCCSCGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHCC----CCHHHHHHHH
T ss_pred cccCCccceeeccCCccccccCHHHhccCCCChHHhHHHHHHHHHHHHhCCCCCccccchhhhhcccccccccHHHHHHH
Confidence 543321 223446888999999999998999999999999999999999998643321 111111
Q ss_pred hcccccccCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhcCcCCC
Q 003963 719 GFMNQRLEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQASRSTV 775 (783)
Q Consensus 719 ~~~~~~~~~~~~~s~~l~~LI~~cL~~dP~~RPsa~ell~~L~~L~~~~f~~~~~~~ 775 (783)
.........+..+++.+.+||.+||..||.+|||+.+++++|+.+....-.+.....
T Consensus 257 ~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~~~~~~~~~~ 313 (327)
T 3lxl_A 257 LEEGQRLPAPPACPAEVHELMKLCWAPSPQDRPSFSALGPQLDMLWSGSRGCETHAF 313 (327)
T ss_dssp HHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHC------------
T ss_pred hhcccCCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhhhcCcccccc
Confidence 222334566788999999999999999999999999999999988776654444433
No 161
>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*
Probab=100.00 E-value=2.8e-41 Score=370.20 Aligned_cols=260 Identities=21% Similarity=0.290 Sum_probs=214.8
Q ss_pred ccceeEeeeeccCCcEEEEEEEEe-CCceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEeceeec--------
Q 003963 504 WEDLTIGEQIGQGSCGTVYHAVWY-GSQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTS-------- 574 (783)
Q Consensus 504 ~~~y~i~~~LG~G~fG~Vy~a~~~-~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~-------- 574 (783)
.++|+++++||+|+||.||+|.+. .++.||||++............+.+|+.+++.++||||+++++++..
T Consensus 16 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 95 (351)
T 3mi9_A 16 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRC 95 (351)
T ss_dssp GGGEEEEEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSSSSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC-------
T ss_pred ccceeEEEEEecCCCcEEEEEEECCCCCEEEEEEEecccccccchHHHHHHHHHHHhccCCCcccHhheeeccccccccC
Confidence 479999999999999999999985 45789999987665444344567789999999999999999999876
Q ss_pred CCceEEEEEecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCc
Q 003963 575 PQRLCIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSR 654 (783)
Q Consensus 575 ~~~~~lV~E~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~ 654 (783)
.+.+|+||||+++ +|.+.+......+++..++.++.||+.||+|||++| |+||||||+||||+.++.+||+|||++.
T Consensus 96 ~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~--ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~ 172 (351)
T 3mi9_A 96 KGSIYLVFDFCEH-DLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHRNK--ILHRDMKAANVLITRDGVLKLADFGLAR 172 (351)
T ss_dssp -CEEEEEEECCSE-EHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHHTT--EECCCCSGGGEEECTTSCEEECCCTTCE
T ss_pred CceEEEEEeccCC-CHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCC--eeCCCCCHHHEEEcCCCCEEEccchhcc
Confidence 3468999999965 888888776677999999999999999999999998 9999999999999999999999999997
Q ss_pred ccccc----cccccCCCCCCcccCcccccC-CCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccccccc--C
Q 003963 655 LKHET----YLTTKTGKGTPQWMAPEVLRN-EPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLE--I 727 (783)
Q Consensus 655 ~~~~~----~~~~~~~~Gt~~Y~aPE~~~~-~~~s~~sDIwSLG~il~elltG~~Pf~~~~~~~~~~~i~~~~~~~~--~ 727 (783)
..... ........||+.|+|||++.+ ..++.++|||||||++|+|++|.+||...........+........ .
T Consensus 173 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~ 252 (351)
T 3mi9_A 173 AFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEV 252 (351)
T ss_dssp ECCCCSSSSCCCCCSSCSCGGGCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTT
T ss_pred cccccccccccccCCcccccCccCchhhcCCCCCCcHhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChhh
Confidence 65422 122234578999999999887 4579999999999999999999999998887766555432211111 1
Q ss_pred CCC----------------------------CCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhcCc
Q 003963 728 PKD----------------------------VDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQASR 772 (783)
Q Consensus 728 ~~~----------------------------~s~~l~~LI~~cL~~dP~~RPsa~ell~~L~~L~~~~f~~~~ 772 (783)
... .++.+.+||.+||..||.+|||+.++ |+|+||+...
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~------l~hp~f~~~~ 319 (351)
T 3mi9_A 253 WPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDA------LNHDFFWSDP 319 (351)
T ss_dssp STTGGGCGGGTSSCCCSSCCCCHHHHHHHHHCCHHHHHHHHHHSCSSGGGSCCHHHH------HTSGGGGSSS
T ss_pred ccccccchhhcccccccccccCHHHHhhhccCChHHHHHHHHHhcCChhhCCCHHHH------hCCCCcCCCC
Confidence 010 26789999999999999999999999 7799997543
No 162
>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A
Probab=100.00 E-value=1.4e-41 Score=369.66 Aligned_cols=254 Identities=24% Similarity=0.422 Sum_probs=194.6
Q ss_pred ccceeEe---eeeccCCcEEEEEEEEeC-CceEEEEEEecccCCHHHHHHHHHHHHHHHhCC-CCceeeEeceeecCCce
Q 003963 504 WEDLTIG---EQIGQGSCGTVYHAVWYG-SQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLR-HPNVLLFMGAVTSPQRL 578 (783)
Q Consensus 504 ~~~y~i~---~~LG~G~fG~Vy~a~~~~-~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~-HpnIv~l~~~~~~~~~~ 578 (783)
.++|.+. ++||+|+||.||+|.+.. ++.||||++.... ...+.+|+.+++.+. ||||+++++++.+....
T Consensus 7 ~~~y~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~-----~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~ 81 (325)
T 3kn6_A 7 YQHYDLDLKDKPLGEGSFSICRKCVHKKSNQAFAVKIISKRM-----EANTQKEITALKLCEGHPNIVKLHEVFHDQLHT 81 (325)
T ss_dssp HHHEEECTTSCCSEEETTEEEEEEEETTTCCEEEEEEEEGGG-----HHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEE
T ss_pred hhccccccCCCccccCCCeEEEEEEECCCCCEEEEEEEChhh-----hhhHHHHHHHHHHhcCCCCeeEEEEEEEcCCEE
Confidence 3566665 789999999999999864 5779999997542 346678999999997 99999999999999999
Q ss_pred EEEEEecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCC---cEEEEecCCCcc
Q 003963 579 CIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHW---TVKVGDFGLSRL 655 (783)
Q Consensus 579 ~lV~E~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~---~vkL~DFGla~~ 655 (783)
|+|||||++++|.+++... ..+++..++.++.||+.||+|||+++ |+||||||+|||++.++ .+||+|||++..
T Consensus 82 ~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~LH~~~--ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~ 158 (325)
T 3kn6_A 82 FLVMELLNGGELFERIKKK-KHFSETEASYIMRKLVSAVSHMHDVG--VVHRDLKPENLLFTDENDNLEIKIIDFGFARL 158 (325)
T ss_dssp EEEECCCCSCBHHHHHHHC-SCCCHHHHHHHHHHHHHHHHHHHHTT--EECCCCCGGGEEEEC----CEEEECCCTTCEE
T ss_pred EEEEEccCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCC--CeecCCCHHHEEEecCCCcccEEEecccccee
Confidence 9999999999999999764 46999999999999999999999998 99999999999997765 899999999986
Q ss_pred cccccccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCCh-------HHHHHHhhcccccccCC
Q 003963 656 KHETYLTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNS-------MQVIGAVGFMNQRLEIP 728 (783)
Q Consensus 656 ~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~elltG~~Pf~~~~~-------~~~~~~i~~~~~~~~~~ 728 (783)
...........+||+.|+|||++.+..++.++|||||||++|+|++|..||...+. .+....+.. ....++
T Consensus 159 ~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~i~~--~~~~~~ 236 (325)
T 3kn6_A 159 KPPDNQPLKTPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKIKK--GDFSFE 236 (325)
T ss_dssp CCC----------------------CCCCHHHHHHHHHHHHHHHHHSSCTTC-------CCCHHHHHHHHTT--TCCCCC
T ss_pred cCCCCCcccccCCCcCccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCccccccccHHHHHHHHHc--CCCCCC
Confidence 65544444566789999999999999999999999999999999999999976443 233333322 222222
Q ss_pred ----CCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhcCcC
Q 003963 729 ----KDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQASRS 773 (783)
Q Consensus 729 ----~~~s~~l~~LI~~cL~~dP~~RPsa~ell~~L~~L~~~~f~~~~~ 773 (783)
..+++++.+||.+||..||.+|||+.++ ++|+||+....
T Consensus 237 ~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~el------l~h~w~~~~~~ 279 (325)
T 3kn6_A 237 GEAWKNVSQEAKDLIQGLLTVDPNKRLKMSGL------RYNEWLQDGSQ 279 (325)
T ss_dssp SHHHHTSCHHHHHHHHHHHCCCTTTCCCTTTS------TTCGGGCTTCC
T ss_pred cccccCCCHHHHHHHHHHCCCChhHCCCHHHH------hcChhhccCcc
Confidence 3589999999999999999999999999 68999987544
No 163
>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*
Probab=100.00 E-value=1.6e-41 Score=366.02 Aligned_cols=252 Identities=25% Similarity=0.353 Sum_probs=206.7
Q ss_pred ccccceeEeeeeccCCcEEEEEEEEeC-CceEEEEEEecccC-CHHHHHHHHHHHHHHHhCCCCceeeEeceeecCCc--
Q 003963 502 ILWEDLTIGEQIGQGSCGTVYHAVWYG-SQDVAVKVFSRQEY-SDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQR-- 577 (783)
Q Consensus 502 ~~~~~y~i~~~LG~G~fG~Vy~a~~~~-~~~vAiK~i~~~~~-~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~-- 577 (783)
...++|++.++||+|+||.||+|.+.. ++.||||++..... .......+.+|+.+++.++||||+++++++.....
T Consensus 9 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~ 88 (311)
T 3ork_A 9 HLSDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAG 88 (311)
T ss_dssp EETTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEETTE
T ss_pred eecCcEEEEEEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccCCCC
Confidence 445789999999999999999999854 57799999987543 34566788999999999999999999999876654
Q ss_pred --eEEEEEecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCcc
Q 003963 578 --LCIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRL 655 (783)
Q Consensus 578 --~~lV~E~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~ 655 (783)
.|+||||+++++|.+++... ..+++..++.++.||+.||+|||+++ |+||||||+||||+.++.+||+|||++..
T Consensus 89 ~~~~lv~e~~~g~~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~--ivH~dlkp~Nil~~~~~~~kl~Dfg~a~~ 165 (311)
T 3ork_A 89 PLPYIVMEYVDGVTLRDIVHTE-GPMTPKRAIEVIADACQALNFSHQNG--IIHRDVKPANIMISATNAVKVMDFGIARA 165 (311)
T ss_dssp EEEEEEEECCCEEEHHHHHHHH-CSCCHHHHHHHHHHHHHHHHHHHHTT--CCCCCCCGGGEEEETTSCEEECCCSCC--
T ss_pred cccEEEEecCCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCC--CCcCCCCHHHEEEcCCCCEEEeeccCccc
Confidence 49999999999999999764 36899999999999999999999998 99999999999999999999999999976
Q ss_pred ccccc---ccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhcccc--cccCCCC
Q 003963 656 KHETY---LTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQ--RLEIPKD 730 (783)
Q Consensus 656 ~~~~~---~~~~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~elltG~~Pf~~~~~~~~~~~i~~~~~--~~~~~~~ 730 (783)
..... .......||+.|+|||++.+..++.++|||||||++|+|++|+.||................. ....+..
T Consensus 166 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (311)
T 3ork_A 166 IADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPSARHEG 245 (311)
T ss_dssp ----------------CCTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHCCCCCHHHHSTT
T ss_pred ccccccccccccccCcCcccCCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCcccccCC
Confidence 54332 122345689999999999999999999999999999999999999998887665544322221 1123456
Q ss_pred CCHHHHHHHHHhhhhCCCCCCCHHHH
Q 003963 731 VDPRWAAIVESCWHSDPQCRPSFQEL 756 (783)
Q Consensus 731 ~s~~l~~LI~~cL~~dP~~RPsa~el 756 (783)
+++++.+||.+||..||.+||++.++
T Consensus 246 ~~~~l~~li~~~l~~dP~~R~~~~~~ 271 (311)
T 3ork_A 246 LSADLDAVVLKALAKNPENRYQTAAE 271 (311)
T ss_dssp CCHHHHHHHHHHTCSSGGGSCSSHHH
T ss_pred CCHHHHHHHHHHHhcCHhhChhhHHH
Confidence 89999999999999999999987776
No 164
>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*
Probab=100.00 E-value=2.5e-41 Score=385.59 Aligned_cols=255 Identities=26% Similarity=0.358 Sum_probs=208.4
Q ss_pred cccceeEeeeeccCCcEEEEEEEEeC-CceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEeceeecCC-----
Q 003963 503 LWEDLTIGEQIGQGSCGTVYHAVWYG-SQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQ----- 576 (783)
Q Consensus 503 ~~~~y~i~~~LG~G~fG~Vy~a~~~~-~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~----- 576 (783)
..++|+++++||+|+||.||+|.+.. ++.||||++..........+.+.+|+.+|+.++|||||++++++....
T Consensus 60 ~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~ 139 (464)
T 3ttj_A 60 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEF 139 (464)
T ss_dssp EETTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEESGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTC
T ss_pred ecCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEECccccChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCccccC
Confidence 35799999999999999999999865 567999999877666667788999999999999999999999996553
Q ss_pred -ceEEEEEecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCcc
Q 003963 577 -RLCIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRL 655 (783)
Q Consensus 577 -~~~lV~E~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~ 655 (783)
.+|+||||+++ +|.+.+.. .+++..++.++.||+.||+|||++| |+||||||+||||+.++.+||+|||+++.
T Consensus 140 ~~~~lv~E~~~~-~l~~~~~~---~l~~~~~~~~~~qil~aL~~lH~~~--iiHrDlkp~NIll~~~~~~kl~DFG~a~~ 213 (464)
T 3ttj_A 140 QDVYLVMELMDA-NLCQVIQM---ELDHERMSYLLYQMLCGIKHLHSAG--IIHRDLKPSNIVVKSDCTLKILDFGLART 213 (464)
T ss_dssp CEEEEEEECCSE-EHHHHHTS---CCCHHHHHHHHHHHHHHHHHHHHTT--CCCCCCCGGGEEECTTSCEEECCCCCC--
T ss_pred CeEEEEEeCCCC-CHHHHHhh---cCCHHHHHHHHHHHHHHHHHHHHCC--cccCCCChHhEEEeCCCCEEEEEEEeeee
Confidence 46999999965 67777753 3889999999999999999999998 99999999999999999999999999986
Q ss_pred cccccccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhcccccc----------
Q 003963 656 KHETYLTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRL---------- 725 (783)
Q Consensus 656 ~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~elltG~~Pf~~~~~~~~~~~i~~~~~~~---------- 725 (783)
..... .....+||+.|+|||++.+..++.++|||||||+||+|++|++||.+.+....+..+......+
T Consensus 214 ~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pF~g~~~~~~~~~i~~~lg~p~~~~~~~~~~ 292 (464)
T 3ttj_A 214 AGTSF-MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQP 292 (464)
T ss_dssp ---CC-CC----CCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHHHTTSCH
T ss_pred cCCCc-ccCCCcccccccCHHHHcCCCCCHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHcch
Confidence 65432 2335679999999999999999999999999999999999999999887665554432111100
Q ss_pred ----------c---------CCCC-----------CCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhc
Q 003963 726 ----------E---------IPKD-----------VDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQA 770 (783)
Q Consensus 726 ----------~---------~~~~-----------~s~~l~~LI~~cL~~dP~~RPsa~ell~~L~~L~~~~f~~ 770 (783)
. ++.. .++++.+||.+||..||.+|||+.++ |+|+||+.
T Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~------L~Hp~~~~ 361 (464)
T 3ttj_A 293 TVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDA------LQHPYINV 361 (464)
T ss_dssp HHHHHHTTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHH------HTSTTTGG
T ss_pred hhhhHhhcccccCCCChHHhCcccccccccccccccCHHHHHHHHHHcCCChhhCCCHHHH------hcChhhhh
Confidence 0 0000 15679999999999999999999999 78999974
No 165
>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*
Probab=100.00 E-value=7e-41 Score=362.38 Aligned_cols=260 Identities=28% Similarity=0.488 Sum_probs=217.3
Q ss_pred ceeEeeeeccCCcEEEEEEEEe-----CCceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEeceeecC--Cce
Q 003963 506 DLTIGEQIGQGSCGTVYHAVWY-----GSQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSP--QRL 578 (783)
Q Consensus 506 ~y~i~~~LG~G~fG~Vy~a~~~-----~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~--~~~ 578 (783)
.|+++++||+|+||.||++.+. .++.||||++.... .......+.+|+.+++.++||||+++++++... ..+
T Consensus 32 ~~~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 110 (318)
T 3lxp_A 32 YLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADA-GPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASL 110 (318)
T ss_dssp GEEEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTC-CHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTTTEE
T ss_pred HHhhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEecccc-ChHHHHHHHHHHHHHHhCCCcchhhEEEEEecCCCceE
Confidence 3499999999999999998653 45679999997653 455567899999999999999999999999874 568
Q ss_pred EEEEEecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCccccc
Q 003963 579 CIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHE 658 (783)
Q Consensus 579 ~lV~E~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~~ 658 (783)
++||||+++++|.+++... .+++..++.++.||+.||.|||+.+ |+|+||||+|||++.++.+||+|||++.....
T Consensus 111 ~lv~e~~~~~~L~~~l~~~--~~~~~~~~~i~~~l~~~l~~LH~~~--ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~ 186 (318)
T 3lxp_A 111 QLVMEYVPLGSLRDYLPRH--SIGLAQLLLFAQQICEGMAYLHAQH--YIHRDLAARNVLLDNDRLVKIGDFGLAKAVPE 186 (318)
T ss_dssp EEEECCCTTCBHHHHGGGS--CCCHHHHHHHHHHHHHHHHHHHHTT--EECSCCSGGGEEECTTCCEEECCGGGCEECCT
T ss_pred EEEEecccCCcHHHHHhhC--CCCHHHHHHHHHHHHHHHHHHHhCC--ccCCCCchheEEEcCCCCEEECCccccccccc
Confidence 9999999999999999764 3899999999999999999999999 99999999999999999999999999986654
Q ss_pred cc---ccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHH--------------HHHHhhcc
Q 003963 659 TY---LTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQ--------------VIGAVGFM 721 (783)
Q Consensus 659 ~~---~~~~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~elltG~~Pf~~~~~~~--------------~~~~i~~~ 721 (783)
.. .......+|+.|+|||++.+..++.++|||||||++|+|++|..||....... ........
T Consensus 187 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (318)
T 3lxp_A 187 GHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTELLER 266 (318)
T ss_dssp TCSEEEC---CCCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCHHHHHHHHHHHHHT
T ss_pred cccccccccCCCCCceeeChHHhcCCCCCcHHHHHHHHHHHHHHHhCCCcccccchhhhhhhcccccchhHHHHHHHHhc
Confidence 32 12334567889999999999989999999999999999999999996532210 01111122
Q ss_pred cccccCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhc
Q 003963 722 NQRLEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQA 770 (783)
Q Consensus 722 ~~~~~~~~~~s~~l~~LI~~cL~~dP~~RPsa~ell~~L~~L~~~~f~~ 770 (783)
......+..+++++.+||.+||..||.+|||+.++++.|+.+...+-..
T Consensus 267 ~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~~~~~~ 315 (318)
T 3lxp_A 267 GERLPRPDKCPAEVYHLMKNCWETEASFRPTFENLIPILKTVHEKYQGQ 315 (318)
T ss_dssp TCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHHC-
T ss_pred ccCCCCCccccHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHHhhccC
Confidence 3355667889999999999999999999999999999999998887544
No 166
>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*
Probab=100.00 E-value=1.7e-41 Score=362.98 Aligned_cols=261 Identities=28% Similarity=0.456 Sum_probs=217.8
Q ss_pred cccceeEeeeeccCCcEEEEEEEEeC-CceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEeceeecCCceEEE
Q 003963 503 LWEDLTIGEQIGQGSCGTVYHAVWYG-SQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIV 581 (783)
Q Consensus 503 ~~~~y~i~~~LG~G~fG~Vy~a~~~~-~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lV 581 (783)
..++|++.+.||+|+||.||+|.+.. ++.||+|++..... .....+.+|+.+++.++||||+++++++...+.+++|
T Consensus 17 ~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~--~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 94 (302)
T 2j7t_A 17 PNEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSE--EELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIM 94 (302)
T ss_dssp GGGTEEEEEEEECSTTCCEEEEEETTTCCEEEEEEEC------CCHHHHHHHHHHHHHCCCTTBCCEEEEEECC-CEEEE
T ss_pred CccceeecceeccCCCeEEEEEEEcCCCcEEEEEEecCCCH--HHHHHHHHHHHHHhcCCCCCEeeeeeeeeeCCeEEEE
Confidence 45789999999999999999999865 56799999865432 2346788999999999999999999999999999999
Q ss_pred EEecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCcccccccc
Q 003963 582 TEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETYL 661 (783)
Q Consensus 582 ~E~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~~ 661 (783)
|||+++++|.+++......+++..++.++.||+.||.|||+++ |+|+||||+|||++.++.+||+|||++........
T Consensus 95 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~--i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 172 (302)
T 2j7t_A 95 IEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLHSKR--IIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQ 172 (302)
T ss_dssp EECCTTEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTT--CCCCCCSGGGEEECTTSCEEECCCHHHHHHHHHHH
T ss_pred EEeCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhcCC--cccCCCCHHHEEECCCCCEEEEECCCCcccccccc
Confidence 9999999999999876677999999999999999999999998 99999999999999999999999998764333322
Q ss_pred cccCCCCCCcccCcccc-----cCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhcccc-cccCCCCCCHHH
Q 003963 662 TTKTGKGTPQWMAPEVL-----RNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQ-RLEIPKDVDPRW 735 (783)
Q Consensus 662 ~~~~~~Gt~~Y~aPE~~-----~~~~~s~~sDIwSLG~il~elltG~~Pf~~~~~~~~~~~i~~~~~-~~~~~~~~s~~l 735 (783)
......||+.|+|||++ .+..++.++|||||||++|+|++|..||...+.......+..... ....+..++..+
T Consensus 173 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 252 (302)
T 2j7t_A 173 KRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSDPPTLLTPSKWSVEF 252 (302)
T ss_dssp C-----CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCCCCCSSGGGSCHHH
T ss_pred ccccccCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHhcCCCCCccCCHHHHHHHHhccCCcccCCccccCHHH
Confidence 33455789999999998 467789999999999999999999999998887766555433222 223456789999
Q ss_pred HHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhcCcC
Q 003963 736 AAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQASRS 773 (783)
Q Consensus 736 ~~LI~~cL~~dP~~RPsa~ell~~L~~L~~~~f~~~~~ 773 (783)
.+||.+||..||.+|||+.++ ++|+||+....
T Consensus 253 ~~li~~~l~~dp~~Rps~~~l------l~h~~~~~~~~ 284 (302)
T 2j7t_A 253 RDFLKIALDKNPETRPSAAQL------LEHPFVSSITS 284 (302)
T ss_dssp HHHHHHHSCSCTTTSCCHHHH------TTSTTTTTCCC
T ss_pred HHHHHHHcccChhhCCCHHHH------hcChHHhhhcc
Confidence 999999999999999999999 67899987654
No 167
>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*
Probab=100.00 E-value=2.3e-41 Score=367.76 Aligned_cols=263 Identities=22% Similarity=0.370 Sum_probs=221.8
Q ss_pred cccccceeEe-eeeccCCcEEEEEEEEeC-CceEEEEEEecccCCHHHHHHHHHHHHHHHhCC-CCceeeEeceeecCCc
Q 003963 501 EILWEDLTIG-EQIGQGSCGTVYHAVWYG-SQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLR-HPNVLLFMGAVTSPQR 577 (783)
Q Consensus 501 e~~~~~y~i~-~~LG~G~fG~Vy~a~~~~-~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~-HpnIv~l~~~~~~~~~ 577 (783)
+...++|.+. ++||+|+||.||+|.+.. ++.||||++............+.+|+.+++.+. ||||+++++++.....
T Consensus 24 ~~~~~~y~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~iv~~~~~~~~~~~ 103 (327)
T 3lm5_A 24 ENFNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHEVYENTSE 103 (327)
T ss_dssp HHHHHHEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESEETTEECHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSE
T ss_pred HhhhhEEeeccceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHhccCCCCEEEEEEEEEeCCe
Confidence 4556788887 899999999999999864 578999999876555444567889999999995 6999999999999999
Q ss_pred eEEEEEecCCCCHHHHHhhc-CCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcC---CCcEEEEecCCC
Q 003963 578 LCIVTEFLPRGSLFRLLQRN-TTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDK---HWTVKVGDFGLS 653 (783)
Q Consensus 578 ~~lV~E~~~ggsL~~~L~~~-~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~---~~~vkL~DFGla 653 (783)
+++||||+.+++|.+++... ...+++..++.++.||+.||+|||+++ |+||||||+||||+. ++.+||+|||++
T Consensus 104 ~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~ql~~~L~~LH~~g--ivH~Dikp~NIl~~~~~~~~~~kL~Dfg~a 181 (327)
T 3lm5_A 104 IILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLHQNN--IVHLDLKPQNILLSSIYPLGDIKIVDFGMS 181 (327)
T ss_dssp EEEEEECCTTEEGGGGGSSCC-CCCCHHHHHHHHHHHHHHHHHHHHTT--EECSCCCGGGEEESCBTTBCCEEECCGGGC
T ss_pred EEEEEEecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCC--eecCcCChHHEEEecCCCCCcEEEeeCccc
Confidence 99999999999999998543 356899999999999999999999998 999999999999987 789999999999
Q ss_pred cccccccccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhcccc--cccCCCCC
Q 003963 654 RLKHETYLTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQ--RLEIPKDV 731 (783)
Q Consensus 654 ~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~elltG~~Pf~~~~~~~~~~~i~~~~~--~~~~~~~~ 731 (783)
........ .....||+.|+|||++.+..++.++|||||||++|+|++|..||...+.......+..... ....+..+
T Consensus 182 ~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~ 260 (327)
T 3lm5_A 182 RKIGHACE-LREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQETYLNISQVNVDYSEETFSSV 260 (327)
T ss_dssp EEC----------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCTTTTTTS
T ss_pred cccCCccc-cccccCCcCccCCeeecCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHhcccccCchhhccc
Confidence 86654322 2345799999999999999999999999999999999999999998887776665543332 23344678
Q ss_pred CHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhcCc
Q 003963 732 DPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQASR 772 (783)
Q Consensus 732 s~~l~~LI~~cL~~dP~~RPsa~ell~~L~~L~~~~f~~~~ 772 (783)
++.+.+||.+||..||.+|||+.++ |+|+||+...
T Consensus 261 ~~~~~~li~~~L~~dP~~Rpt~~~l------l~h~~~~~~~ 295 (327)
T 3lm5_A 261 SQLATDFIQSLLVKNPEKRPTAEIC------LSHSWLQQWD 295 (327)
T ss_dssp CHHHHHHHHHHSCSSGGGSCCHHHH------TTCGGGCCCC
T ss_pred CHHHHHHHHHHcCCChhhCcCHHHH------hCCHhhcccc
Confidence 9999999999999999999999999 6899997653
No 168
>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...
Probab=100.00 E-value=4.8e-41 Score=369.64 Aligned_cols=260 Identities=22% Similarity=0.358 Sum_probs=218.1
Q ss_pred cccccceeEeeeeccCCcEEEEEEEEeC-CceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEeceeecCCceE
Q 003963 501 EILWEDLTIGEQIGQGSCGTVYHAVWYG-SQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLC 579 (783)
Q Consensus 501 e~~~~~y~i~~~LG~G~fG~Vy~a~~~~-~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~ 579 (783)
++..++|++.++||+|+||.||++.+.. ++.||+|++.... .......+.+|+.+++.++||||+++++++...+.+|
T Consensus 29 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 107 (360)
T 3eqc_A 29 ELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEI-KPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEIS 107 (360)
T ss_dssp CCCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECCC-CHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEETTEEE
T ss_pred ccccccceeeeeecCCCCeEEEEEEECCCCcEEEEEEecccc-CHHHHHHHHHHHHHHHHCCCCCEEEEeEEEEECCEEE
Confidence 4456899999999999999999999864 5679999987653 4556678999999999999999999999999999999
Q ss_pred EEEEecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhC-CCCEEecCCCCCCEEEcCCCcEEEEecCCCccccc
Q 003963 580 IVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHC-NPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHE 658 (783)
Q Consensus 580 lV~E~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~-~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~~ 658 (783)
+||||+++++|.+++... ..+++..++.++.||+.||.|||+. + |+||||||+||||+.++.+||+|||++.....
T Consensus 108 lv~e~~~~~~L~~~l~~~-~~~~~~~~~~i~~~i~~~l~~lh~~~~--i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 184 (360)
T 3eqc_A 108 ICMEHMDGGSLDQVLKKA-GRIPEQILGKVSIAVIKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLID 184 (360)
T ss_dssp EEECCCTTCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHHHHC--CCCSCCSGGGEEECTTCCEEECCCCCCHHHHH
T ss_pred EEEECCCCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHhCC--EEcCCccHHHEEECCCCCEEEEECCCCccccc
Confidence 999999999999999764 3589999999999999999999985 8 99999999999999999999999999875533
Q ss_pred ccccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhh-------------------
Q 003963 659 TYLTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVG------------------- 719 (783)
Q Consensus 659 ~~~~~~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~elltG~~Pf~~~~~~~~~~~i~------------------- 719 (783)
. ......||+.|+|||++.+..++.++|||||||++|+|++|..||...+.......+.
T Consensus 185 ~--~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (360)
T 3eqc_A 185 S--MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGR 262 (360)
T ss_dssp H--C----CCCCTTCCHHHHTTCCCSHHHHHHHHHHHHHHHHHTSCCSSCCCHHHHHHHHC-------------------
T ss_pred c--cccCCCCCCCeECHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhcccccccCCCCCCCcccCCC
Confidence 2 2234578999999999999999999999999999999999999998766544322211
Q ss_pred -----------------------cccccccCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhcCc
Q 003963 720 -----------------------FMNQRLEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQASR 772 (783)
Q Consensus 720 -----------------------~~~~~~~~~~~~s~~l~~LI~~cL~~dP~~RPsa~ell~~L~~L~~~~f~~~~ 772 (783)
........+..++.++.+||.+||..||.+|||+.++ |+|+||+...
T Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~el------l~hp~~~~~~ 332 (360)
T 3eqc_A 263 PLNKFGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQL------MVHAFIKRSD 332 (360)
T ss_dssp -----------CCCHHHHHHHHHHSCCCCCCTTTSCHHHHHHHHHHHCSSTTTSCCHHHH------HTSHHHHHHH
T ss_pred cccccccCCCCcccchhhhhHHhccCCCCCCcccccHHHHHHHHHHhhcChhhCCCHHHH------hhChHhhcch
Confidence 0111111223478999999999999999999999999 6789997643
No 169
>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A
Probab=100.00 E-value=9.1e-41 Score=358.51 Aligned_cols=260 Identities=22% Similarity=0.358 Sum_probs=220.5
Q ss_pred cccceeEeeeeccCCcEEEEEEEEe-CCceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEeceeecCCceEEE
Q 003963 503 LWEDLTIGEQIGQGSCGTVYHAVWY-GSQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIV 581 (783)
Q Consensus 503 ~~~~y~i~~~LG~G~fG~Vy~a~~~-~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lV 581 (783)
..++|.+.+.||+|+||.||++.+. .++.||||++...... ....+.+|+.+++.++||||+++++++.....+|+|
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~--~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 84 (304)
T 2jam_A 7 IRKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAF--RDSSLENEIAVLKKIKHENIVTLEDIYESTTHYYLV 84 (304)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC--------HHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred hhccceeeeeccCCCCceEEEEEECCCCCEEEEEEEeccccc--chHHHHHHHHHHHhCCCCCeeehhhhcccCCEEEEE
Confidence 3578999999999999999999986 4578999999764322 235678999999999999999999999999999999
Q ss_pred EEecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEE---cCCCcEEEEecCCCccccc
Q 003963 582 TEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLV---DKHWTVKVGDFGLSRLKHE 658 (783)
Q Consensus 582 ~E~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl---~~~~~vkL~DFGla~~~~~ 658 (783)
|||+++++|.+++... ..+++..++.++.||+.||.|||+++ |+|+||||+|||+ +.++.+||+|||++.....
T Consensus 85 ~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~--i~H~dikp~NIl~~~~~~~~~~kl~Dfg~~~~~~~ 161 (304)
T 2jam_A 85 MQLVSGGELFDRILER-GVYTEKDASLVIQQVLSAVKYLHENG--IVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQN 161 (304)
T ss_dssp ECCCCSCBHHHHHHHH-SCCCHHHHHHHHHHHHHHHHHHHHTT--CCCCSCCGGGCEESSSSTTCCEEBCSCSTTCCCCC
T ss_pred EEcCCCccHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCC--ccccCCCHHHEEEecCCCCCCEEEccCCcceecCC
Confidence 9999999999998764 35899999999999999999999998 9999999999999 7788999999999875443
Q ss_pred ccccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhcccc--cccCCCCCCHHHH
Q 003963 659 TYLTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQ--RLEIPKDVDPRWA 736 (783)
Q Consensus 659 ~~~~~~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~elltG~~Pf~~~~~~~~~~~i~~~~~--~~~~~~~~s~~l~ 736 (783)
.. .....||+.|+|||++.+..++.++|||||||++|+|++|..||...........+..... ....+..+++.+.
T Consensus 162 ~~--~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 239 (304)
T 2jam_A 162 GI--MSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEETESKLFEKIKEGYYEFESPFWDDISESAK 239 (304)
T ss_dssp BT--THHHHSCCCBCCTTTBSSCSCCHHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHCCCCCCTTTTTTSCHHHH
T ss_pred Cc--cccccCCCCccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcCCCCCCccccccCCHHHH
Confidence 21 2233589999999999999999999999999999999999999998887776666543322 2234467899999
Q ss_pred HHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhcCcCCC
Q 003963 737 AIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQASRSTV 775 (783)
Q Consensus 737 ~LI~~cL~~dP~~RPsa~ell~~L~~L~~~~f~~~~~~~ 775 (783)
+||.+||..||.+||++.++ +.|+||+......
T Consensus 240 ~li~~~l~~dp~~Rps~~~~------l~h~~~~~~~~~~ 272 (304)
T 2jam_A 240 DFICHLLEKDPNERYTCEKA------LSHPWIDGNTALH 272 (304)
T ss_dssp HHHHHHHCSSTTTSCCHHHH------HTSHHHHSSCSCC
T ss_pred HHHHHHcCCChhHCcCHHHH------hcCccccCCCccc
Confidence 99999999999999999999 6789998765443
No 170
>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}
Probab=100.00 E-value=3.7e-41 Score=358.94 Aligned_cols=267 Identities=28% Similarity=0.477 Sum_probs=217.2
Q ss_pred cccccccccceeEeeeeccCCcEEEEEEEEeC-CceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEeceeecC
Q 003963 497 CLDYEILWEDLTIGEQIGQGSCGTVYHAVWYG-SQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSP 575 (783)
Q Consensus 497 ~~~~e~~~~~y~i~~~LG~G~fG~Vy~a~~~~-~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~ 575 (783)
...+....++|.....||+|+||.||+|.+.. ++.||||++..... ...+.+.+|+.+++.++||||+++++++...
T Consensus 14 ~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~ 91 (295)
T 2clq_A 14 LLEYDYEYDENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDS--RYSQPLHEEIALHKHLKHKNIVQYLGSFSEN 91 (295)
T ss_dssp CCCEEECBCTTSSBCEEEECSSSEEEEEEETTTCCEEEEEEEECCCC-----HHHHHHHHHHHTCCCTTBCCEEEEEEET
T ss_pred cccccccccCCCCcEEEeecCcEEEEEEEECCCCeEEEEEEccCCch--HHHHHHHHHHHHHHhCCCCCEeeEeeEEEeC
Confidence 34455556677777799999999999999865 46799999876542 3346788999999999999999999999999
Q ss_pred CceEEEEEecCCCCHHHHHhhcC--CcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcC-CCcEEEEecCC
Q 003963 576 QRLCIVTEFLPRGSLFRLLQRNT--TKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDK-HWTVKVGDFGL 652 (783)
Q Consensus 576 ~~~~lV~E~~~ggsL~~~L~~~~--~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~-~~~vkL~DFGl 652 (783)
+.+++||||+++++|.+++.... ..+++..++.++.||+.||.|||+++ |+|+||||+|||++. ++.+||+|||+
T Consensus 92 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~--i~H~dl~p~Nil~~~~~~~~kl~Dfg~ 169 (295)
T 2clq_A 92 GFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQ--IVHRDIKGDNVLINTYSGVLKISDFGT 169 (295)
T ss_dssp TEEEEEEECCSEEEHHHHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTT--EECCCCSGGGEEEETTTCCEEECCTTT
T ss_pred CcEEEEEEeCCCCCHHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhCC--EEccCCChhhEEEECCCCCEEEeeccc
Confidence 99999999999999999997643 34668889999999999999999998 999999999999987 89999999999
Q ss_pred CcccccccccccCCCCCCcccCcccccCCC--CCchhHHHHHHHHHHHHHcCCCCCCCCChHHH-HHHhhcccccccCCC
Q 003963 653 SRLKHETYLTTKTGKGTPQWMAPEVLRNEP--SDEKSDVYSFGVILWELATEKIPWDNLNSMQV-IGAVGFMNQRLEIPK 729 (783)
Q Consensus 653 a~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~--~s~~sDIwSLG~il~elltG~~Pf~~~~~~~~-~~~i~~~~~~~~~~~ 729 (783)
+..............|++.|+|||++.+.. ++.++|||||||++|+|++|..||........ ............++.
T Consensus 170 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 249 (295)
T 2clq_A 170 SKRLAGINPCTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKVGMFKVHPEIPE 249 (295)
T ss_dssp CEESCC-----CCCCCCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHTSCTTGGGSSHHHHHHHHHHHCCCCCCCT
T ss_pred ccccCCCCCcccccCCCccccChhhhcCCCCCCCcHHHHHHHHHHHHHHHHCCCCccCCCchhHHHHhhccccccccccc
Confidence 986654433344567899999999987654 78999999999999999999999976543322 222222334556778
Q ss_pred CCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhcCcC
Q 003963 730 DVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQASRS 773 (783)
Q Consensus 730 ~~s~~l~~LI~~cL~~dP~~RPsa~ell~~L~~L~~~~f~~~~~ 773 (783)
.+++++.+||.+||..||.+||++.++ ++|+||+....
T Consensus 250 ~~~~~~~~li~~~l~~dp~~Rps~~~l------l~~~~~~~~~~ 287 (295)
T 2clq_A 250 SMSAEAKAFILKCFEPDPDKRACANDL------LVDEFLKVSSK 287 (295)
T ss_dssp TSCHHHHHHHHHTTCSSTTTSCCHHHH------HTSGGGCC---
T ss_pred cCCHHHHHHHHHHccCChhhCCCHHHH------hcChhhhhccc
Confidence 899999999999999999999999999 78899976553
No 171
>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*
Probab=100.00 E-value=1.6e-40 Score=375.40 Aligned_cols=262 Identities=23% Similarity=0.321 Sum_probs=209.0
Q ss_pred cccceeEeeeeccCCcEEEEEEEEeC-CceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEeceeecC-----C
Q 003963 503 LWEDLTIGEQIGQGSCGTVYHAVWYG-SQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSP-----Q 576 (783)
Q Consensus 503 ~~~~y~i~~~LG~G~fG~Vy~a~~~~-~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~-----~ 576 (783)
..++|++.++||+|+||.||+|.+.. ++.||||++..........+.+.+|+.+|+.++||||+++++++... .
T Consensus 24 i~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~ 103 (432)
T 3n9x_A 24 VPDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKFD 103 (432)
T ss_dssp CCTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSTTTSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCC
T ss_pred ecCCEEEEEEEeecCCEEEEEEEECCCCcEEEEEEeCchhcChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCCcCC
Confidence 45799999999999999999999865 46799999987665666678899999999999999999999999766 5
Q ss_pred ceEEEEEecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCccc
Q 003963 577 RLCIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLK 656 (783)
Q Consensus 577 ~~~lV~E~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~ 656 (783)
.+|+||||++ ++|.+++.. ...+++..++.++.||+.||.|||+++ |+||||||+||||+.++.+||+|||+++..
T Consensus 104 ~~~lv~e~~~-~~L~~~~~~-~~~l~~~~~~~i~~qil~aL~~LH~~g--ivHrDlkp~NILl~~~~~~kL~DFGla~~~ 179 (432)
T 3n9x_A 104 ELYIVLEIAD-SDLKKLFKT-PIFLTEEHIKTILYNLLLGENFIHESG--IIHRDLKPANCLLNQDCSVKVCDFGLARTI 179 (432)
T ss_dssp CEEEEEECCS-EEHHHHHHS-SCCCCHHHHHHHHHHHHHHHHHHHHTT--EECCCCCGGGEEECTTCCEEECCCTTCEEC
T ss_pred eEEEEEecCC-cCHHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHHHCC--CCCCCCCHHHeEECCCCCEEEccCCCcccc
Confidence 6899999995 599999975 356999999999999999999999999 999999999999999999999999999865
Q ss_pred ccccc----------------------cccCCCCCCcccCcccc-cCCCCCchhHHHHHHHHHHHHHcCC----------
Q 003963 657 HETYL----------------------TTKTGKGTPQWMAPEVL-RNEPSDEKSDVYSFGVILWELATEK---------- 703 (783)
Q Consensus 657 ~~~~~----------------------~~~~~~Gt~~Y~aPE~~-~~~~~s~~sDIwSLG~il~elltG~---------- 703 (783)
..... .....+||+.|+|||++ .+..++.++|||||||+||||++|.
T Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~~~~~~~ 259 (432)
T 3n9x_A 180 NSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSHINDPTNR 259 (432)
T ss_dssp -------------------------------CCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHTTCTTTCSSGGGC
T ss_pred cccccccccccccccccccccccchhccccCCCCCccccCHHHHhcCCCCCcccccchHHHHHHHHHhcccccccccccc
Confidence 43321 12456799999999986 5666899999999999999999854
Q ss_pred -CCCCCCCh-----------------HHHHHH------------------------hhccccccc-----CCCCCCHHHH
Q 003963 704 -IPWDNLNS-----------------MQVIGA------------------------VGFMNQRLE-----IPKDVDPRWA 736 (783)
Q Consensus 704 -~Pf~~~~~-----------------~~~~~~------------------------i~~~~~~~~-----~~~~~s~~l~ 736 (783)
++|.+.+. ...+.. +........ ....+++++.
T Consensus 260 ~p~f~g~~~~~~~~~~~~~~~~~~~~~~ql~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~ 339 (432)
T 3n9x_A 260 FPLFPGSSCFPLSPDRNSKKVHEKSNRDQLNIIFNIIGTPTEDDLKNINKPEVIKYIKLFPHRKPINLKQKYPSISDDGI 339 (432)
T ss_dssp CCSCCCSCSCC----------CHHHHHHHHHHHHHHHCSCCHHHHHTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHHH
T ss_pred cccCCCccccccCcccccccccccchHHHHHHHHHhcCCCCHHHHHhccCHHHHHHHHhCCCCCCCCHHHHCCCCCHHHH
Confidence 44433221 011100 000000111 1145899999
Q ss_pred HHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhcCcCC
Q 003963 737 AIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQASRST 774 (783)
Q Consensus 737 ~LI~~cL~~dP~~RPsa~ell~~L~~L~~~~f~~~~~~ 774 (783)
+||.+||..||.+|||+.++ |+|+||+..+..
T Consensus 340 dLl~~mL~~dP~~R~ta~e~------L~Hp~f~~~~~~ 371 (432)
T 3n9x_A 340 NLLESMLKFNPNKRITIDQA------LDHPYLKDVRKK 371 (432)
T ss_dssp HHHHHHSCSSTTTSCCHHHH------HTCGGGTTTCCT
T ss_pred HHHHHHhcCCcccCCCHHHH------hcChhhhhccCc
Confidence 99999999999999999999 789999876543
No 172
>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}
Probab=100.00 E-value=3.2e-41 Score=364.81 Aligned_cols=258 Identities=19% Similarity=0.354 Sum_probs=208.7
Q ss_pred cccceeEeeeeccCCcEEEEEEEEeC-CceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEeceeecCC--ceE
Q 003963 503 LWEDLTIGEQIGQGSCGTVYHAVWYG-SQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQ--RLC 579 (783)
Q Consensus 503 ~~~~y~i~~~LG~G~fG~Vy~a~~~~-~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~--~~~ 579 (783)
..++|++.++||+|+||.||+|.+.. ++.||||++....... ....+.+|+.+++.++||||+++++++.... .+|
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~-~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 85 (319)
T 4euu_A 7 SNHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLR-PVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKV 85 (319)
T ss_dssp SSEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGS-CHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEE
T ss_pred CCCCEEEEEEecCCCCeEEEEEEECCCCcEEEEEEeccccccc-hHHHHHHHHHHHHhcCCCCcceEEEEeecCCCceEE
Confidence 45789999999999999999999875 5789999997644222 2456778999999999999999999987655 789
Q ss_pred EEEEecCCCCHHHHHhhcCC--cchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEE----cCCCcEEEEecCCC
Q 003963 580 IVTEFLPRGSLFRLLQRNTT--KLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLV----DKHWTVKVGDFGLS 653 (783)
Q Consensus 580 lV~E~~~ggsL~~~L~~~~~--~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl----~~~~~vkL~DFGla 653 (783)
+||||+++++|.+++..... .+++..++.++.||+.||+|||+++ |+||||||+|||| +.++.+||+|||++
T Consensus 86 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~--ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg~a 163 (319)
T 4euu_A 86 LIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENG--IVHRNIKPGNIMRVIGEDGQSVYKLTDFGAA 163 (319)
T ss_dssp EEEECCTTCBHHHHHHSGGGTTCCCHHHHHHHHHHHHHHHHHHHHTT--EECSCCSGGGEEEEECTTSCEEEEECCCTTC
T ss_pred EEEeCCCCCCHHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHCC--EecCCCCHHHEEEeccCCCCceEEEccCCCc
Confidence 99999999999999976433 3899999999999999999999998 9999999999999 77888999999999
Q ss_pred cccccccccccCCCCCCcccCccccc--------CCCCCchhHHHHHHHHHHHHHcCCCCCCCCCh----HHHHHHhhcc
Q 003963 654 RLKHETYLTTKTGKGTPQWMAPEVLR--------NEPSDEKSDVYSFGVILWELATEKIPWDNLNS----MQVIGAVGFM 721 (783)
Q Consensus 654 ~~~~~~~~~~~~~~Gt~~Y~aPE~~~--------~~~~s~~sDIwSLG~il~elltG~~Pf~~~~~----~~~~~~i~~~ 721 (783)
+...... ......||+.|+|||++. +..++.++|||||||++|+|++|..||..... ......+...
T Consensus 164 ~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~ 242 (319)
T 4euu_A 164 RELEDDE-QFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITG 242 (319)
T ss_dssp EECCTTC-CBCCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHHHHSSCSEECTTCGGGCHHHHHHHHHH
T ss_pred eecCCCC-ceeecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCccchhHHHHHHHhcC
Confidence 8665443 223557999999999986 57789999999999999999999999965432 2222222111
Q ss_pred cc-------------------cc----cCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHH
Q 003963 722 NQ-------------------RL----EIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQ 764 (783)
Q Consensus 722 ~~-------------------~~----~~~~~~s~~l~~LI~~cL~~dP~~RPsa~ell~~L~~L~ 764 (783)
.. .. .++..++..+.+||.+||+.||.+|||+.+++++..+-.
T Consensus 243 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R~s~~ell~h~~d~~ 308 (319)
T 4euu_A 243 KPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDIL 308 (319)
T ss_dssp CCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHHT
T ss_pred CCcccchhhhcccCCccccCccCCcccccchhHHHHhHHHHHHhccCChhhhccHHHhhhccHHHh
Confidence 10 01 112234567899999999999999999999988776543
No 173
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*
Probab=100.00 E-value=1.4e-41 Score=389.52 Aligned_cols=260 Identities=28% Similarity=0.413 Sum_probs=223.6
Q ss_pred ccccceeEeeeeccCCcEEEEEEEEe-CCceEEEEEEecccCC-HHHHHHHHHHHHHHHhCCCCceeeEeceeecCCceE
Q 003963 502 ILWEDLTIGEQIGQGSCGTVYHAVWY-GSQDVAVKVFSRQEYS-DEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLC 579 (783)
Q Consensus 502 ~~~~~y~i~~~LG~G~fG~Vy~a~~~-~~~~vAiK~i~~~~~~-~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~ 579 (783)
...++|++.++||+|+||.||+|.+. .++.||||++...... ......+.+|+.+++.++|||||++++++...+.+|
T Consensus 23 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~ 102 (484)
T 3nyv_A 23 IFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFY 102 (484)
T ss_dssp CHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEE
T ss_pred cccCceEEeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEE
Confidence 34578999999999999999999986 4578999999765432 233467889999999999999999999999999999
Q ss_pred EEEEecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEE---cCCCcEEEEecCCCccc
Q 003963 580 IVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLV---DKHWTVKVGDFGLSRLK 656 (783)
Q Consensus 580 lV~E~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl---~~~~~vkL~DFGla~~~ 656 (783)
+|||||.+++|.+++... ..+++..++.++.||+.||.|||+++ |+||||||+|||| +.++.+||+|||++...
T Consensus 103 lv~e~~~~~~L~~~~~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~--ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~ 179 (484)
T 3nyv_A 103 LVGEVYTGGELFDEIISR-KRFSEVDAARIIRQVLSGITYMHKNK--IVHRDLKPENLLLESKSKDANIRIIDFGLSTHF 179 (484)
T ss_dssp EEECCCCSCBHHHHHHTC-SCCBHHHHHHHHHHHHHHHHHHHHTT--CCCSCCCGGGEEESSSSTTCCEEECCTTHHHHB
T ss_pred EEEecCCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCC--eeeCCCCHHHEEEecCCCCCcEEEEeeeeeEEc
Confidence 999999999999999764 46999999999999999999999998 9999999999999 56789999999998765
Q ss_pred ccccccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhcccccccC--CCCCCHH
Q 003963 657 HETYLTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLEI--PKDVDPR 734 (783)
Q Consensus 657 ~~~~~~~~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~--~~~~s~~ 734 (783)
.... .....+||+.|+|||++.+ .++.++|||||||++|+|++|.+||...+.......+......... +..++++
T Consensus 180 ~~~~-~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~ 257 (484)
T 3nyv_A 180 EASK-KMKDKIGTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKKVSES 257 (484)
T ss_dssp CCCC-SHHHHTTGGGTCCHHHHHT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCSGGGGGSCHH
T ss_pred cccc-ccccCCCCccccCceeecC-CCCCcceeHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcCCCCCCCcccccCCHH
Confidence 4432 2234578999999999987 5899999999999999999999999999888877776544433332 3568999
Q ss_pred HHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhcCc
Q 003963 735 WAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQASR 772 (783)
Q Consensus 735 l~~LI~~cL~~dP~~RPsa~ell~~L~~L~~~~f~~~~ 772 (783)
+.+||.+||..||.+|||+.++ |+|+||+...
T Consensus 258 ~~~li~~~L~~dp~~R~s~~e~------l~h~~~~~~~ 289 (484)
T 3nyv_A 258 AKDLIRKMLTYVPSMRISARDA------LDHEWIQTYT 289 (484)
T ss_dssp HHHHHHHHTCSSGGGSCCHHHH------HTSHHHHHHT
T ss_pred HHHHHHHHCCCChhHCcCHHHH------hhChhhcccc
Confidence 9999999999999999999999 6789987654
No 174
>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=3.6e-41 Score=373.64 Aligned_cols=264 Identities=31% Similarity=0.522 Sum_probs=214.9
Q ss_pred cceeEeeeeccCCcEEEEEEEEeCC----ceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEeceee-cCCceE
Q 003963 505 EDLTIGEQIGQGSCGTVYHAVWYGS----QDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVT-SPQRLC 579 (783)
Q Consensus 505 ~~y~i~~~LG~G~fG~Vy~a~~~~~----~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~-~~~~~~ 579 (783)
..|++.++||+|+||.||+|.+... ..||+|++.... .......+.+|+.+++.++||||+++++++. ..+..+
T Consensus 89 ~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~ 167 (373)
T 3c1x_A 89 LIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRIT-DIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPL 167 (373)
T ss_dssp EEEEEEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCS-CSHHHHHHHHHHTTSTTCCCTTBCCCCEEECCCSSCCE
T ss_pred ceeecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCC-CHHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCCCeE
Confidence 4688999999999999999987532 248999886533 3345678999999999999999999999865 456889
Q ss_pred EEEEecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCcccccc
Q 003963 580 IVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHET 659 (783)
Q Consensus 580 lV~E~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~~~ 659 (783)
+||||+++++|.+++......+++..++.++.||+.||.|||+++ |+||||||+||||+.++.+||+|||+++.....
T Consensus 168 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~--ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~ 245 (373)
T 3c1x_A 168 VVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKK--FVHRDLAARNCMLDEKFTVKVADFGLARDMYDK 245 (373)
T ss_dssp EEEECCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTT--CCCSCCCGGGEEECTTCCEEECCC---------
T ss_pred EEEECCCCCCHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHHCC--EecCccchheEEECCCCCEEEeecccccccccc
Confidence 999999999999999877777899999999999999999999998 999999999999999999999999999755332
Q ss_pred cc----cccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCChHHHHHHhhcccccccCCCCCCHH
Q 003963 660 YL----TTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELAT-EKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPR 734 (783)
Q Consensus 660 ~~----~~~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~ 734 (783)
.. ......+|+.|+|||++.+..++.++|||||||++|+|++ |.+||...+..+....+. .......+..+++.
T Consensus 246 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt~~~~p~~~~~~~~~~~~~~-~~~~~~~p~~~~~~ 324 (373)
T 3c1x_A 246 EFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLL-QGRRLLQPEYCPDP 324 (373)
T ss_dssp ------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCSSCHHHHHH-TTCCCCCCTTCCHH
T ss_pred ccccccccCCCCCcccccChHHhcCCCCCcHHHHHHHHHHHHHHHhCcCCCCCCCCHHHHHHHHH-cCCCCCCCCCCCHH
Confidence 11 1123357889999999999999999999999999999999 788998776655544442 23345567789999
Q ss_pred HHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhcCc
Q 003963 735 WAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQASR 772 (783)
Q Consensus 735 l~~LI~~cL~~dP~~RPsa~ell~~L~~L~~~~f~~~~ 772 (783)
+.+||.+||..||.+||++.++++.|+++...+.....
T Consensus 325 l~~li~~cl~~dp~~RPs~~ell~~L~~i~~~~~~~~~ 362 (373)
T 3c1x_A 325 LYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFIGEHY 362 (373)
T ss_dssp HHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHTCCSCCB
T ss_pred HHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhccccce
Confidence 99999999999999999999999999999888765443
No 175
>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A
Probab=100.00 E-value=1.3e-40 Score=368.00 Aligned_cols=259 Identities=24% Similarity=0.422 Sum_probs=220.1
Q ss_pred ccccceeEeeeeccCCcEEEEEEEEe-CCceEEEEEEecccC--C----HHHHHHHHHHHHHHHhC-CCCceeeEeceee
Q 003963 502 ILWEDLTIGEQIGQGSCGTVYHAVWY-GSQDVAVKVFSRQEY--S----DEVIHSFRQEVSLMKRL-RHPNVLLFMGAVT 573 (783)
Q Consensus 502 ~~~~~y~i~~~LG~G~fG~Vy~a~~~-~~~~vAiK~i~~~~~--~----~~~~~~~~~Ei~il~~l-~HpnIv~l~~~~~ 573 (783)
...++|++.+.||+|+||.||+|.+. .++.||||++..... . ......+.+|+.+++.+ +||||+++++++.
T Consensus 91 ~~~~~y~~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~ 170 (365)
T 2y7j_A 91 EFYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSYE 170 (365)
T ss_dssp HHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEE
T ss_pred hhhhhcccceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEEEEEEe
Confidence 34578999999999999999999986 467899999976542 1 23356788999999999 7999999999999
Q ss_pred cCCceEEEEEecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCC
Q 003963 574 SPQRLCIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLS 653 (783)
Q Consensus 574 ~~~~~~lV~E~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla 653 (783)
.....|+||||+++++|.+++... ..+++..++.++.||+.||.|||+.| |+|+||||+||||+.++.+||+|||++
T Consensus 171 ~~~~~~lv~e~~~g~~L~~~l~~~-~~l~~~~~~~i~~qi~~~L~~LH~~g--i~H~Dlkp~NIl~~~~~~ikl~DfG~~ 247 (365)
T 2y7j_A 171 SSSFMFLVFDLMRKGELFDYLTEK-VALSEKETRSIMRSLLEAVSFLHANN--IVHRDLKPENILLDDNMQIRLSDFGFS 247 (365)
T ss_dssp BSSEEEEEECCCTTCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHHTT--EECSCCSGGGEEECTTCCEEECCCTTC
T ss_pred eCCEEEEEEEeCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCC--eecCCCCHHHEEECCCCCEEEEecCcc
Confidence 999999999999999999999754 46899999999999999999999998 999999999999999999999999998
Q ss_pred cccccccccccCCCCCCcccCcccccC------CCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccccccc-
Q 003963 654 RLKHETYLTTKTGKGTPQWMAPEVLRN------EPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLE- 726 (783)
Q Consensus 654 ~~~~~~~~~~~~~~Gt~~Y~aPE~~~~------~~~s~~sDIwSLG~il~elltG~~Pf~~~~~~~~~~~i~~~~~~~~- 726 (783)
....... .....+||+.|+|||++.+ ..++.++|||||||++|+|++|..||...........+........
T Consensus 248 ~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~ 326 (365)
T 2y7j_A 248 CHLEPGE-KLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQILMLRMIMEGQYQFSS 326 (365)
T ss_dssp EECCTTC-CBCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCH
T ss_pred cccCCCc-ccccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhCCCCCCC
Confidence 7655432 2335679999999999863 3578899999999999999999999988877766655533222221
Q ss_pred -CCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhc
Q 003963 727 -IPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQA 770 (783)
Q Consensus 727 -~~~~~s~~l~~LI~~cL~~dP~~RPsa~ell~~L~~L~~~~f~~ 770 (783)
.+..+++.+.+||.+||..||.+||++.++ ++|+||+.
T Consensus 327 ~~~~~~~~~~~~li~~~L~~dP~~Rps~~el------l~hp~f~r 365 (365)
T 2y7j_A 327 PEWDDRSSTVKDLISRLLQVDPEARLTAEQA------LQHPFFER 365 (365)
T ss_dssp HHHSSSCHHHHHHHHHHSCSSTTTSCCHHHH------HHSGGGCC
T ss_pred cccccCCHHHHHHHHHHcCCChhHCcCHHHH------hcCcccCC
Confidence 225688999999999999999999999999 78999973
No 176
>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*
Probab=100.00 E-value=6.3e-41 Score=358.21 Aligned_cols=252 Identities=33% Similarity=0.563 Sum_probs=202.8
Q ss_pred ccccceeEeeeeccCCcEEEEEEEEeCCceEEEEEEecccCCHHHHHHHHHHHHHHHh--CCCCceeeEeceeec----C
Q 003963 502 ILWEDLTIGEQIGQGSCGTVYHAVWYGSQDVAVKVFSRQEYSDEVIHSFRQEVSLMKR--LRHPNVLLFMGAVTS----P 575 (783)
Q Consensus 502 ~~~~~y~i~~~LG~G~fG~Vy~a~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~--l~HpnIv~l~~~~~~----~ 575 (783)
...++|++.++||+|+||.||+|.+ .++.||||++.... ...+.+|.+++.. ++||||+++++++.. .
T Consensus 5 ~~~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~-----~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~~~~ 78 (301)
T 3q4u_A 5 TVARDITLLECVGKGRYGEVWRGSW-QGENVAVKIFSSRD-----EKSWFRETELYNTVMLRHENILGFIASDMTSRHSS 78 (301)
T ss_dssp CCGGGCEEEEEEEECSSEEEEEEEE-TTEEEEEEEECGGG-----HHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEETTE
T ss_pred cccCcEEEEEeeccCCCcEEEEEEE-CCEEEEEEEecccc-----chhhHHHHHHHHHhhccCcCeeeEEEeeccccCCC
Confidence 4467999999999999999999987 56789999986542 2445667777777 789999999998654 3
Q ss_pred CceEEEEEecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHH--------hCCCCEEecCCCCCCEEEcCCCcEEE
Q 003963 576 QRLCIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLH--------HCNPPIIHRDLKSSNLLVDKHWTVKV 647 (783)
Q Consensus 576 ~~~~lV~E~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH--------~~~~~IvHrDIKp~NILl~~~~~vkL 647 (783)
..+++||||+++|+|.+++.. ..+++..++.++.||+.||+||| +++ |+||||||+||||+.++.+||
T Consensus 79 ~~~~lv~e~~~~g~L~~~l~~--~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~--ivH~Dlkp~Nill~~~~~~kl 154 (301)
T 3q4u_A 79 TQLWLITHYHEMGSLYDYLQL--TTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPA--IAHRDLKSKNILVKKNGQCCI 154 (301)
T ss_dssp EEEEEEECCCTTCBHHHHHTT--CCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCE--EECSCCCGGGEEECTTSCEEE
T ss_pred ceeEEehhhccCCCHHHHHhh--cccCHHHHHHHHHHHHHHHHHHHHhhhhccCCCC--eecCCCChHhEEEcCCCCEEE
Confidence 458999999999999999964 35899999999999999999999 877 999999999999999999999
Q ss_pred EecCCCccccccccc----ccCCCCCCcccCcccccCC------CCCchhHHHHHHHHHHHHHcC----------CCCCC
Q 003963 648 GDFGLSRLKHETYLT----TKTGKGTPQWMAPEVLRNE------PSDEKSDVYSFGVILWELATE----------KIPWD 707 (783)
Q Consensus 648 ~DFGla~~~~~~~~~----~~~~~Gt~~Y~aPE~~~~~------~~s~~sDIwSLG~il~elltG----------~~Pf~ 707 (783)
+|||++......... .....||+.|+|||++.+. .++.++|||||||++|+|++| ..||.
T Consensus 155 ~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~tg~~~~~~~~~~~~pf~ 234 (301)
T 3q4u_A 155 ADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFY 234 (301)
T ss_dssp CCCTTCEEEETTTTEEECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTT
T ss_pred eeCCCeeecccccccccccccccccccceeChhhhcCcCCCCcccCCchhhHHHHHHHHHHHHhhhcCcccccccccccc
Confidence 999999765433221 2334799999999999877 345799999999999999999 88885
Q ss_pred CCCh-----HHHHHHhhcccccccCCC-----CCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHH
Q 003963 708 NLNS-----MQVIGAVGFMNQRLEIPK-----DVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDL 763 (783)
Q Consensus 708 ~~~~-----~~~~~~i~~~~~~~~~~~-----~~s~~l~~LI~~cL~~dP~~RPsa~ell~~L~~L 763 (783)
.... ......+........++. .+++.+.+||.+||+.||.+|||+.++++.|+++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i 300 (301)
T 3q4u_A 235 DVVPNDPSFEDMRKVVCVDQQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKKTLTKI 300 (301)
T ss_dssp TTSCSSCCHHHHHHHHTTSCCCCCCCGGGGGSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHH
T ss_pred ccCCCCcchhhhhHHHhccCCCCCCChhhccCccHHHHHHHHHHHhhcChhhCCCHHHHHHHHhcc
Confidence 4322 222222222222333332 2457899999999999999999999999999876
No 177
>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=1.7e-40 Score=391.31 Aligned_cols=261 Identities=25% Similarity=0.481 Sum_probs=219.7
Q ss_pred cccccceeEee-eeccCCcEEEEEEEEeC---CceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEeceeecCC
Q 003963 501 EILWEDLTIGE-QIGQGSCGTVYHAVWYG---SQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQ 576 (783)
Q Consensus 501 e~~~~~y~i~~-~LG~G~fG~Vy~a~~~~---~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~ 576 (783)
.+..+++.+.+ +||+|+||.||+|.+.. +..||||++..... ....+.+.+|+.+|+.++|||||++++++.. +
T Consensus 331 ~~~~~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~-~~~~~~~~~E~~il~~l~hpniv~l~~~~~~-~ 408 (613)
T 2ozo_A 331 FLKRDNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTE-KADTEEMMREAQIMHQLDNPYIVRLIGVCQA-E 408 (613)
T ss_dssp BCCTTSEEEEEEEEEECSSSEEEEEEEECSSCEEEEEEEECCCCCS-STTHHHHHHHHHHHTTCCCTTBCCEEEEEES-S
T ss_pred eccccceeEcCcEEecCCCcEEEEEEEecCCCcEEEEEEEcCCCCC-hHHHHHHHHHHHHHHhCCCCCEeeEEEEecc-C
Confidence 44556777776 89999999999998763 34699999976532 2335678999999999999999999999976 5
Q ss_pred ceEEEEEecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCccc
Q 003963 577 RLCIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLK 656 (783)
Q Consensus 577 ~~~lV~E~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~ 656 (783)
.+++|||||++|+|.+++......+++..++.++.||+.||+|||+++ ||||||||+||||+.++.+||+|||+++..
T Consensus 409 ~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~--iiHrDlkp~NILl~~~~~vkL~DFGla~~~ 486 (613)
T 2ozo_A 409 ALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKN--FVHRNLAARNVLLVNRHYAKISDFGLSKAL 486 (613)
T ss_dssp SEEEEEECCTTCBHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCSGGGEEEEETTEEEECCCSTTTTC
T ss_pred CeEEEEEeCCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCC--EEcCcCCHHHEEEcCCCcEEEeeccCcccc
Confidence 699999999999999999877777999999999999999999999998 999999999999999999999999999865
Q ss_pred ccccc---cccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCChHHHHHHhhcccccccCCCCCC
Q 003963 657 HETYL---TTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELAT-EKIPWDNLNSMQVIGAVGFMNQRLEIPKDVD 732 (783)
Q Consensus 657 ~~~~~---~~~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s 732 (783)
..... ......+++.|+|||++.+..++.++|||||||+||||++ |..||...+..+....+. .......+..++
T Consensus 487 ~~~~~~~~~~~~~~~~~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~~~~~i~-~~~~~~~p~~~~ 565 (613)
T 2ozo_A 487 GADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIE-QGKRMECPPECP 565 (613)
T ss_dssp C--------------CCTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCSHHHHHHHH-TTCCCCCCTTCC
T ss_pred cCCCceeeeccCCCCccceeCHhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHH-cCCCCCCCCcCC
Confidence 43211 1223346789999999999999999999999999999998 999999988877776654 334567788899
Q ss_pred HHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHH
Q 003963 733 PRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQ 766 (783)
Q Consensus 733 ~~l~~LI~~cL~~dP~~RPsa~ell~~L~~L~~~ 766 (783)
+++.+||..||..||.+||++.+|++.|+.+...
T Consensus 566 ~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~~~~ 599 (613)
T 2ozo_A 566 PELYALMSDCWIYKWEDRPDFLTVEQRMRACYYS 599 (613)
T ss_dssp HHHHHHHHHTTCSSTTTSCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHHH
Confidence 9999999999999999999999999988766444
No 178
>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}
Probab=100.00 E-value=1.8e-41 Score=370.41 Aligned_cols=252 Identities=23% Similarity=0.396 Sum_probs=215.5
Q ss_pred cccceeEeeeeccCCcEEEEEEEEeC-CceEEEEEEecccCCHH------HHHHHHHHHHHHHhCCCCceeeEeceeecC
Q 003963 503 LWEDLTIGEQIGQGSCGTVYHAVWYG-SQDVAVKVFSRQEYSDE------VIHSFRQEVSLMKRLRHPNVLLFMGAVTSP 575 (783)
Q Consensus 503 ~~~~y~i~~~LG~G~fG~Vy~a~~~~-~~~vAiK~i~~~~~~~~------~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~ 575 (783)
..++|++.++||+|+||.||+|.+.. ++.||||++........ ....+.+|+.+++.++||||+++++++...
T Consensus 22 ~~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~ 101 (335)
T 3dls_A 22 YSQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFENQ 101 (335)
T ss_dssp HHHHEEEEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEEECS
T ss_pred cccceEEEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEeeC
Confidence 45789999999999999999999754 56799999987643221 234567799999999999999999999999
Q ss_pred CceEEEEEecCCC-CHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCc
Q 003963 576 QRLCIVTEFLPRG-SLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSR 654 (783)
Q Consensus 576 ~~~~lV~E~~~gg-sL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~ 654 (783)
+.+++||||+.+| +|.+++... ..+++..++.++.||+.||.|||+++ |+||||||+||||+.++.+||+|||++.
T Consensus 102 ~~~~lv~e~~~~g~~l~~~~~~~-~~l~~~~~~~i~~qi~~~L~~LH~~~--ivH~Dlkp~NIll~~~~~~kL~Dfg~a~ 178 (335)
T 3dls_A 102 GFFQLVMEKHGSGLDLFAFIDRH-PRLDEPLASYIFRQLVSAVGYLRLKD--IIHRDIKDENIVIAEDFTIKLIDFGSAA 178 (335)
T ss_dssp SEEEEEEECCTTSCBHHHHHHTC-CCCCHHHHHHHHHHHHHHHHHHHHTT--EECSCCSGGGEEECTTSCEEECCCTTCE
T ss_pred CEEEEEEEeCCCCccHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCC--eEEeccCHHHEEEcCCCcEEEeecccce
Confidence 9999999999766 999999764 35999999999999999999999998 9999999999999999999999999998
Q ss_pred ccccccccccCCCCCCcccCcccccCCCC-CchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhcccccccCCCCCCH
Q 003963 655 LKHETYLTTKTGKGTPQWMAPEVLRNEPS-DEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDP 733 (783)
Q Consensus 655 ~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~-s~~sDIwSLG~il~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~ 733 (783)
...... .....+||+.|+|||++.+..+ +.++|||||||++|+|++|..||..... ........+..+++
T Consensus 179 ~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~--------~~~~~~~~~~~~~~ 249 (335)
T 3dls_A 179 YLERGK-LFYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCELEE--------TVEAAIHPPYLVSK 249 (335)
T ss_dssp ECCTTC-CBCEECSCGGGCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSCSSGGG--------GTTTCCCCSSCCCH
T ss_pred ECCCCC-ceeccCCCccccChhhhcCCCCCCCcccchhHHHHHHHHHhCCCchhhHHH--------HHhhccCCCcccCH
Confidence 665432 2234578999999999998876 8899999999999999999999976322 12334456677999
Q ss_pred HHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhcCc
Q 003963 734 RWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQASR 772 (783)
Q Consensus 734 ~l~~LI~~cL~~dP~~RPsa~ell~~L~~L~~~~f~~~~ 772 (783)
++.+||.+||..||.+|||+.++ ++|+||+...
T Consensus 250 ~l~~li~~~L~~dP~~Rps~~el------l~hp~~~~~~ 282 (335)
T 3dls_A 250 ELMSLVSGLLQPVPERRTTLEKL------VTDPWVTQPV 282 (335)
T ss_dssp HHHHHHHHHTCSSGGGSCCHHHH------HHCTTTTCCC
T ss_pred HHHHHHHHHccCChhhCcCHHHH------hcCccccCCc
Confidence 99999999999999999999999 6789997643
No 179
>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...
Probab=100.00 E-value=6.2e-41 Score=353.70 Aligned_cols=261 Identities=25% Similarity=0.382 Sum_probs=217.6
Q ss_pred ccceeEeeeeccCCcEEEEEEEEeC-CceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEeceeecCCceEEEE
Q 003963 504 WEDLTIGEQIGQGSCGTVYHAVWYG-SQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIVT 582 (783)
Q Consensus 504 ~~~y~i~~~LG~G~fG~Vy~a~~~~-~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lV~ 582 (783)
.++|++.+.||+|+||.||+|.+.. ++.||||++...... .....+.+|+.+++.++||||+++++++...+..|+||
T Consensus 6 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 84 (276)
T 2yex_A 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAV-DCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFL 84 (276)
T ss_dssp HHHEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGCT-THHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred ecceEEEEEeecCCCcEEEEEEECCCCcEEEEEEeeeccch-hhhHHHHHHHHHHHhcCCCCceeeeeEEEcCCEEEEEE
Confidence 4689999999999999999999864 578999999765433 34567889999999999999999999999999999999
Q ss_pred EecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCccccccc--
Q 003963 583 EFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETY-- 660 (783)
Q Consensus 583 E~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~-- 660 (783)
||+++++|.+++... ..+++..++.++.||+.||.|||+++ |+|+||||+||+++.++.+||+|||++.......
T Consensus 85 e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~--i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~ 161 (276)
T 2yex_A 85 EYCSGGELFDRIEPD-IGMPEPDAQRFFHQLMAGVVYLHGIG--ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRE 161 (276)
T ss_dssp ECCTTEEGGGGSBTT-TBCCHHHHHHHHHHHHHHHHHHHHTT--EECSCCSGGGEEECTTCCEEECCCTTCEECEETTEE
T ss_pred EecCCCcHHHHHhhc-cCCCHHHHHHHHHHHHHHHHHHHhCC--eeccCCChHHEEEccCCCEEEeeCCCccccCCCcch
Confidence 999999999998653 46899999999999999999999998 9999999999999999999999999997654321
Q ss_pred ccccCCCCCCcccCcccccCCCC-CchhHHHHHHHHHHHHHcCCCCCCCCChH-HHHHHhhcccccccCCCCCCHHHHHH
Q 003963 661 LTTKTGKGTPQWMAPEVLRNEPS-DEKSDVYSFGVILWELATEKIPWDNLNSM-QVIGAVGFMNQRLEIPKDVDPRWAAI 738 (783)
Q Consensus 661 ~~~~~~~Gt~~Y~aPE~~~~~~~-s~~sDIwSLG~il~elltG~~Pf~~~~~~-~~~~~i~~~~~~~~~~~~~s~~l~~L 738 (783)
.......|++.|+|||++.+..+ +.++|||||||++|+|++|..||...... ..................+++.+.+|
T Consensus 162 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 241 (276)
T 2yex_A 162 RLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLAL 241 (276)
T ss_dssp CCBCCCCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHHHHHHHSSCCCSCSCTTSHHHHHHHTTCTTSTTGGGSCHHHHHH
T ss_pred hcccCCccccCccChHHHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCchHHHHHHHhhhcccccCchhhcCHHHHHH
Confidence 12335578999999999988765 77999999999999999999999766543 22222222222223345689999999
Q ss_pred HHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhcCcCC
Q 003963 739 VESCWHSDPQCRPSFQELVDKLRDLQRQYFQASRST 774 (783)
Q Consensus 739 I~~cL~~dP~~RPsa~ell~~L~~L~~~~f~~~~~~ 774 (783)
|.+||..||.+|||+.++ ++|+||+.....
T Consensus 242 i~~~l~~~p~~Rps~~~i------l~~~~~~~~~~~ 271 (276)
T 2yex_A 242 LHKILVENPSARITIPDI------KKDRWYNKPLKK 271 (276)
T ss_dssp HHHHSCSSTTTSCCHHHH------TTCTTTTCCCC-
T ss_pred HHHHCCCCchhCCCHHHH------hcCccccChhhc
Confidence 999999999999999999 678999876543
No 180
>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7
Probab=100.00 E-value=4.4e-41 Score=390.25 Aligned_cols=258 Identities=33% Similarity=0.592 Sum_probs=225.0
Q ss_pred cccccccceeEeeeeccCCcEEEEEEEEeCCceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEeceeecCCce
Q 003963 499 DYEILWEDLTIGEQIGQGSCGTVYHAVWYGSQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRL 578 (783)
Q Consensus 499 ~~e~~~~~y~i~~~LG~G~fG~Vy~a~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~ 578 (783)
.|++..++|++.++||+|+||.||+|.+..+..||||++....... +.|.+|+.+|+.++|||||++++++.. ..+
T Consensus 261 ~~~i~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~---~~~~~E~~~l~~l~hpniv~~~~~~~~-~~~ 336 (535)
T 2h8h_A 261 AWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSP---EAFLQEAQVMKKLRHEKLVQLYAVVSE-EPI 336 (535)
T ss_dssp CSBCCGGGEEEEEEEEECSSEEEEEEEETTTEEEEEEEECTTSSCH---HHHHHHHHHHHHCCCTTBCCEEEEECS-SSC
T ss_pred ceecchhhhhhheecccCCCeEEEEEEECCCceEEEEEeCCCCCCH---HHHHHHHHHHHhCCCCCEeeEEEEEee-ccc
Confidence 4677788999999999999999999999887889999998765443 468899999999999999999999876 678
Q ss_pred EEEEEecCCCCHHHHHhhc-CCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCcccc
Q 003963 579 CIVTEFLPRGSLFRLLQRN-TTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKH 657 (783)
Q Consensus 579 ~lV~E~~~ggsL~~~L~~~-~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~ 657 (783)
|||||||.+|+|.++|... ...+++..++.++.||+.||+|||+++ ||||||||+||||+.++.+||+|||+++...
T Consensus 337 ~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~--ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~ 414 (535)
T 2h8h_A 337 YIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMN--YVHRDLRAANILVGENLVCKVADFGLARLIE 414 (535)
T ss_dssp EEEECCCTTEEHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCSGGGEEECGGGCEEECCTTSTTTCC
T ss_pred eEeeehhcCCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC--eeCCCCCHhhEEEcCCCcEEEcccccceecC
Confidence 9999999999999999753 345889999999999999999999998 9999999999999999999999999998654
Q ss_pred ccc-ccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCChHHHHHHhhcccccccCCCCCCHHH
Q 003963 658 ETY-LTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELAT-EKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRW 735 (783)
Q Consensus 658 ~~~-~~~~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~l 735 (783)
... .......++..|+|||++.+..++.++|||||||+||||++ |+.||......+....+. ...+...+..++..+
T Consensus 415 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t~g~~P~~~~~~~~~~~~i~-~~~~~~~~~~~~~~l 493 (535)
T 2h8h_A 415 DNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVE-RGYRMPCPPECPESL 493 (535)
T ss_dssp CHHHHTTCSTTSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTTCCSSTTCCHHHHHHHHH-TTCCCCCCTTCCHHH
T ss_pred CCceecccCCcCcccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHH-cCCCCCCCCCCCHHH
Confidence 332 12223456789999999999999999999999999999999 999999988877776654 334566778899999
Q ss_pred HHHHHHhhhhCCCCCCCHHHHHHHHHHH
Q 003963 736 AAIVESCWHSDPQCRPSFQELVDKLRDL 763 (783)
Q Consensus 736 ~~LI~~cL~~dP~~RPsa~ell~~L~~L 763 (783)
.+||.+||..||++|||+.+|++.|+.+
T Consensus 494 ~~li~~cl~~dP~~RPt~~~l~~~L~~~ 521 (535)
T 2h8h_A 494 HDLMCQCWRKEPEERPTFEYLQAFLEDY 521 (535)
T ss_dssp HHHHHHHTCSSGGGSCCHHHHHHHHHTS
T ss_pred HHHHHHHcCCChhHCcCHHHHHHHHHHH
Confidence 9999999999999999999999887654
No 181
>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*
Probab=100.00 E-value=2.5e-40 Score=373.66 Aligned_cols=259 Identities=24% Similarity=0.305 Sum_probs=213.5
Q ss_pred cccccceeEeeeeccCCcEEEEEEEEeC-CceEEEEEEecccCCHHHHHHHHHHHHHHHhC------CCCceeeEeceee
Q 003963 501 EILWEDLTIGEQIGQGSCGTVYHAVWYG-SQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRL------RHPNVLLFMGAVT 573 (783)
Q Consensus 501 e~~~~~y~i~~~LG~G~fG~Vy~a~~~~-~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l------~HpnIv~l~~~~~ 573 (783)
+....+|++.++||+|+||.||+|.+.. ++.||||++... ......+.+|+.+++.+ +|+||+++++++.
T Consensus 93 ~~~~~ry~~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~---~~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~ 169 (429)
T 3kvw_A 93 DHVAYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNE---KRFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFT 169 (429)
T ss_dssp CEETTTEEEEEEEEESSSEEEEEEEETTTTEEEEEEEECSC---HHHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEE
T ss_pred CcccCcEEEEEEcccCccEEEEEEEECCCCcEEEEEEECCc---cchHHHHHHHHHHHHHHhhccccCCcCEEEEEeecc
Confidence 4456789999999999999999999865 567999998653 34456677888888887 5779999999999
Q ss_pred cCCceEEEEEecCCCCHHHHHhhcC-CcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCc--EEEEec
Q 003963 574 SPQRLCIVTEFLPRGSLFRLLQRNT-TKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWT--VKVGDF 650 (783)
Q Consensus 574 ~~~~~~lV~E~~~ggsL~~~L~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~--vkL~DF 650 (783)
....+|+||||+. ++|.+++.... ..+++..++.++.||+.||+|||+++ ||||||||+||||+.++. +||+||
T Consensus 170 ~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~--ivHrDlKp~NILl~~~~~~~vkL~DF 246 (429)
T 3kvw_A 170 FRNHICMTFELLS-MNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKNR--IIHCDLKPENILLKQQGRSGIKVIDF 246 (429)
T ss_dssp ETTEEEEEECCCC-CBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHHT--EECSCCSGGGEEESSTTSCCEEECCC
T ss_pred cCCeEEEEEeccC-CCHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCC--eecCCCCHHHeEEccCCCcceEEeec
Confidence 9999999999995 69999987644 45899999999999999999999998 999999999999999887 999999
Q ss_pred CCCcccccccccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhcccccc-----
Q 003963 651 GLSRLKHETYLTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRL----- 725 (783)
Q Consensus 651 Gla~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~elltG~~Pf~~~~~~~~~~~i~~~~~~~----- 725 (783)
|+++..... ....+||+.|+|||++.+..++.++|||||||+||+|++|.+||...+....+..+......+
T Consensus 247 G~a~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~~~~~~l~~i~~~~~~p~~~~~ 323 (429)
T 3kvw_A 247 GSSCYEHQR---VYTYIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGEDEGDQLACMIELLGMPSQKLL 323 (429)
T ss_dssp TTCEETTCC---CCSSCSCGGGCCHHHHHTBCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHH
T ss_pred ccceecCCc---ccccCCCCCccChHHHhCCCCCchHHHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCCHHHH
Confidence 999765432 235678999999999999999999999999999999999999999887766554332110000
Q ss_pred ----------------------------------------------------cCCCCCCHHHHHHHHHhhhhCCCCCCCH
Q 003963 726 ----------------------------------------------------EIPKDVDPRWAAIVESCWHSDPQCRPSF 753 (783)
Q Consensus 726 ----------------------------------------------------~~~~~~s~~l~~LI~~cL~~dP~~RPsa 753 (783)
.++...++.+.+||.+||+.||.+|||+
T Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~dli~~~L~~dP~~Rpta 403 (429)
T 3kvw_A 324 DASKRAKNFVSSKGYPRYCTVTTLSDGSVVLNGGRSRRGKLRGPPESREWGNALKGCDDPLFLDFLKQCLEWDPAVRMTP 403 (429)
T ss_dssp HTBTTHHHHBCTTSCBTTSCEECCCC--CEECCEECTTCCEECSTTCSCHHHHTTTCCCHHHHHHHHHHTCSSTTTSCCH
T ss_pred HhhhhhhhccCCCCCcccccccccccccccccccccchhhccCCccchhhHhhccccchHHHHHHHHHHCCCChhhCCCH
Confidence 0122347889999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhcCcCC
Q 003963 754 QELVDKLRDLQRQYFQASRST 774 (783)
Q Consensus 754 ~ell~~L~~L~~~~f~~~~~~ 774 (783)
.++ |+|+||+.....
T Consensus 404 ~e~------L~Hpw~~~~~~~ 418 (429)
T 3kvw_A 404 GQA------LRHPWLRRRLPK 418 (429)
T ss_dssp HHH------HTSTTTC-----
T ss_pred HHH------hCChhhccCCCC
Confidence 999 789999876543
No 182
>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...
Probab=100.00 E-value=1.4e-40 Score=360.82 Aligned_cols=252 Identities=21% Similarity=0.360 Sum_probs=207.3
Q ss_pred ccceeEeeeeccCCcEEEEEEEEeC-CceEEEEEEecccCCHHHHHHHHHHHHHHHhCC-CCceeeEeceeec--CCceE
Q 003963 504 WEDLTIGEQIGQGSCGTVYHAVWYG-SQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLR-HPNVLLFMGAVTS--PQRLC 579 (783)
Q Consensus 504 ~~~y~i~~~LG~G~fG~Vy~a~~~~-~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~-HpnIv~l~~~~~~--~~~~~ 579 (783)
.++|++.++||+|+||.||+|.+.. ++.||||++.... ...+.+|+.+++.++ ||||+++++++.. ....+
T Consensus 35 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-----~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~ 109 (330)
T 3nsz_A 35 QDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVK-----KKKIKREIKILENLRGGPNIITLADIVKDPVSRTPA 109 (330)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSCC-----HHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCCEE
T ss_pred CCceEEEEEecccCCeEEEEEEECCCCcEEEEEEecccc-----hHHHHHHHHHHHHcCCCCCEEEeeeeeccCCCCceE
Confidence 4789999999999999999999754 5789999986433 256889999999997 9999999999987 56789
Q ss_pred EEEEecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCC-cEEEEecCCCccccc
Q 003963 580 IVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHW-TVKVGDFGLSRLKHE 658 (783)
Q Consensus 580 lV~E~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~-~vkL~DFGla~~~~~ 658 (783)
+||||+++++|.+++.. +++..++.++.||+.||+|||+++ |+||||||+||||+.++ .+||+|||++.....
T Consensus 110 lv~e~~~~~~l~~~~~~----~~~~~~~~~~~qi~~~l~~lH~~~--ivH~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~ 183 (330)
T 3nsz_A 110 LVFEHVNNTDFKQLYQT----LTDYDIRFYMYEILKALDYCHSMG--IMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHP 183 (330)
T ss_dssp EEEECCCCCCHHHHGGG----CCHHHHHHHHHHHHHHHHHHHHTT--EECCCCSGGGEEEETTTTEEEECCCTTCEECCT
T ss_pred EEEeccCchhHHHHHHh----CCHHHHHHHHHHHHHHHHHHHhCC--eeeCCCCHHHEEEcCCCCEEEEEeCCCceEcCC
Confidence 99999999999998853 788899999999999999999999 99999999999999776 899999999986554
Q ss_pred ccccccCCCCCCcccCcccccC-CCCCchhHHHHHHHHHHHHHcCCCCCCCCC-hHHHHHHhhcc-------------cc
Q 003963 659 TYLTTKTGKGTPQWMAPEVLRN-EPSDEKSDVYSFGVILWELATEKIPWDNLN-SMQVIGAVGFM-------------NQ 723 (783)
Q Consensus 659 ~~~~~~~~~Gt~~Y~aPE~~~~-~~~s~~sDIwSLG~il~elltG~~Pf~~~~-~~~~~~~i~~~-------------~~ 723 (783)
.. ......|++.|+|||++.+ ..++.++|||||||++|+|++|..||.... ....+..+... ..
T Consensus 184 ~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 262 (330)
T 3nsz_A 184 GQ-EYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNI 262 (330)
T ss_dssp TC-CCCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTTC
T ss_pred CC-ccccccccccccChhhhcCCCcCCchhhHHHHHHHHHHHHhCCCCcccCCchHHHHHHHHHhcCCchhhhHHHHhcc
Confidence 32 2335578999999999987 668999999999999999999999995432 22222111000 00
Q ss_pred ----------------------cccCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhcCcC
Q 003963 724 ----------------------RLEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQASRS 773 (783)
Q Consensus 724 ----------------------~~~~~~~~s~~l~~LI~~cL~~dP~~RPsa~ell~~L~~L~~~~f~~~~~ 773 (783)
....+..+++++.+||.+||..||.+|||+.++ |+|+||+....
T Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~------l~hp~f~~~~~ 328 (330)
T 3nsz_A 263 ELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREA------MEHPYFYTVVK 328 (330)
T ss_dssp CCCTHHHHHHCCCCCCCGGGGCCTTTGGGCCHHHHHHHHTTSCSSGGGSCCHHHH------HTSGGGTTCC-
T ss_pred ccccchhhhhhhccccchhhhccccccccCCHHHHHHHHHHhcCCcccCCCHHHH------hcCccHhhhcc
Confidence 001122378999999999999999999999999 78999987653
No 183
>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*
Probab=100.00 E-value=1.2e-40 Score=361.46 Aligned_cols=263 Identities=26% Similarity=0.458 Sum_probs=220.1
Q ss_pred cccccceeEeeeeccCCcEEEEEEEEe------CCceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEeceeec
Q 003963 501 EILWEDLTIGEQIGQGSCGTVYHAVWY------GSQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTS 574 (783)
Q Consensus 501 e~~~~~y~i~~~LG~G~fG~Vy~a~~~------~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~ 574 (783)
++..++|++.+.||+|+||.||+|.+. .++.||||++.... .......+.+|+.+++.++||||+++++++..
T Consensus 26 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~ 104 (327)
T 2yfx_A 26 EVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVC-SEQDELDFLMEALIISKFNHQNIVRCIGVSLQ 104 (327)
T ss_dssp BCCGGGCEEEEECC--CSSCEEEEEC--------CCEEEEEECCSSC-CHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred cCChhheEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEecccc-chhhHHHHHHHHHHHhhCCCCCCCeEEEEEcC
Confidence 455689999999999999999999842 34579999986443 44556678899999999999999999999999
Q ss_pred CCceEEEEEecCCCCHHHHHhhcC------CcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcC---CCcE
Q 003963 575 PQRLCIVTEFLPRGSLFRLLQRNT------TKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDK---HWTV 645 (783)
Q Consensus 575 ~~~~~lV~E~~~ggsL~~~L~~~~------~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~---~~~v 645 (783)
....|+||||+++++|.+++.... ..+++..++.++.||+.||.|||+++ |+||||||+||||+. +..+
T Consensus 105 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~--i~H~dlkp~NIli~~~~~~~~~ 182 (327)
T 2yfx_A 105 SLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH--FIHRDIAARNCLLTCPGPGRVA 182 (327)
T ss_dssp SSSCEEEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCCGGGEEESCSSTTCCE
T ss_pred CCCcEEEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHhhCC--eecCcCCHhHEEEecCCCcceE
Confidence 999999999999999999997653 34889999999999999999999998 999999999999984 4569
Q ss_pred EEEecCCCccccccc--ccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCChHHHHHHhhccc
Q 003963 646 KVGDFGLSRLKHETY--LTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELAT-EKIPWDNLNSMQVIGAVGFMN 722 (783)
Q Consensus 646 kL~DFGla~~~~~~~--~~~~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~ellt-G~~Pf~~~~~~~~~~~i~~~~ 722 (783)
||+|||++....... .......|++.|+|||++.+..++.++|||||||++|+|++ |..||...........+. ..
T Consensus 183 kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~-~~ 261 (327)
T 2yfx_A 183 KIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVT-SG 261 (327)
T ss_dssp EECCCHHHHHHHC------CCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHH-TT
T ss_pred EECccccccccccccccccCCCcCCCcceeCHhHhcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCcCHHHHHHHHh-cC
Confidence 999999987543221 12223457889999999999999999999999999999998 999999888777665553 23
Q ss_pred ccccCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHH
Q 003963 723 QRLEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQY 767 (783)
Q Consensus 723 ~~~~~~~~~s~~l~~LI~~cL~~dP~~RPsa~ell~~L~~L~~~~ 767 (783)
.....+..+++.+.+||.+||..||.+||++.++++.|+.+....
T Consensus 262 ~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~~~~~~ 306 (327)
T 2yfx_A 262 GRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQDP 306 (327)
T ss_dssp CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHCH
T ss_pred CCCCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHhcCH
Confidence 355667789999999999999999999999999999999886643
No 184
>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}
Probab=100.00 E-value=1.9e-40 Score=357.37 Aligned_cols=253 Identities=33% Similarity=0.625 Sum_probs=207.7
Q ss_pred ccccceeEeeeeccCCcEEEEEEEEeCCceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEeceeecCCceEEE
Q 003963 502 ILWEDLTIGEQIGQGSCGTVYHAVWYGSQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIV 581 (783)
Q Consensus 502 ~~~~~y~i~~~LG~G~fG~Vy~a~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lV 581 (783)
+..++|++.+.||+|+||.||++.+. ++.||||++... ...+.+.+|+.+++.++||||+++++++. +..++|
T Consensus 5 i~~~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~----~~~~~~~~E~~~l~~l~hp~iv~~~~~~~--~~~~lv 77 (307)
T 2eva_A 5 IDYKEIEVEEVVGRGAFGVVCKAKWR-AKDVAIKQIESE----SERKAFIVELRQLSRVNHPNIVKLYGACL--NPVCLV 77 (307)
T ss_dssp CCGGGEEEEEEEECCSSSEEEEEEET-TEEEEEEECSST----THHHHHHHHHHHHHHCCCTTBCCEEEBCT--TTTEEE
T ss_pred CCHhHeeeeeEeecCCCceEEEEEEC-CeeEEEEEecCh----hHHHHHHHHHHHHhcCCCCCcCeEEEEEc--CCcEEE
Confidence 34578999999999999999999875 568999998643 23467889999999999999999999887 358999
Q ss_pred EEecCCCCHHHHHhhcCC--cchHHHHHHHHHHHHHHHHHHHh---CCCCEEecCCCCCCEEEcCCCc-EEEEecCCCcc
Q 003963 582 TEFLPRGSLFRLLQRNTT--KLDWRRRILMALDIARGVSYLHH---CNPPIIHRDLKSSNLLVDKHWT-VKVGDFGLSRL 655 (783)
Q Consensus 582 ~E~~~ggsL~~~L~~~~~--~l~~~~~~~i~~qi~~aL~~LH~---~~~~IvHrDIKp~NILl~~~~~-vkL~DFGla~~ 655 (783)
|||+++++|.+++..... .++...++.++.||+.||+|||+ ++ |+||||||+|||++.++. +||+|||++..
T Consensus 78 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~--ivH~dlkp~NIll~~~~~~~kl~Dfg~~~~ 155 (307)
T 2eva_A 78 MEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKA--LIHRDLKPPNLLLVAGGTVLKICDFGTACD 155 (307)
T ss_dssp EECCTTCBHHHHHHCSSSEECCCHHHHHHHHHHHHHHHHHHHTCSSSC--CCCCCCSGGGEEEETTTTEEEECCCCC---
T ss_pred EEcCCCCCHHHHHhccCCCCccCHHHHHHHHHHHHHHHHHHHhCCCCC--eecCCCChhHEEEeCCCCEEEEcccccccc
Confidence 999999999999976432 36788999999999999999999 66 999999999999998886 79999999875
Q ss_pred cccccccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChH--HHHHHhhcccccccCCCCCCH
Q 003963 656 KHETYLTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSM--QVIGAVGFMNQRLEIPKDVDP 733 (783)
Q Consensus 656 ~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~elltG~~Pf~~~~~~--~~~~~i~~~~~~~~~~~~~s~ 733 (783)
.... .....||+.|+|||++.+..++.++|||||||++|+|++|+.||...... .....+ ........+..+++
T Consensus 156 ~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 231 (307)
T 2eva_A 156 IQTH---MTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWAV-HNGTRPPLIKNLPK 231 (307)
T ss_dssp ------------CCTTSSCHHHHTCCCCCTHHHHHHHHHHHHHHHHTCCTTTTTCSSHHHHHHHH-HTTCCCCCBTTCCH
T ss_pred cccc---cccCCCCCceEChhhhCCCCCCcHHHHHHHHHHHHHHHHCCCCchhhCccHHHHHHHH-hcCCCCCcccccCH
Confidence 5432 12346899999999999999999999999999999999999999865432 222222 22334566778999
Q ss_pred HHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHH
Q 003963 734 RWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQY 767 (783)
Q Consensus 734 ~l~~LI~~cL~~dP~~RPsa~ell~~L~~L~~~~ 767 (783)
.+.+||.+||..||.+|||+.++++.|+.+...+
T Consensus 232 ~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~ 265 (307)
T 2eva_A 232 PIESLMTRCWSKDPSQRPSMEEIVKIMTHLMRYF 265 (307)
T ss_dssp HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHGGGC
T ss_pred HHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHhc
Confidence 9999999999999999999999999999886554
No 185
>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}
Probab=100.00 E-value=1.2e-40 Score=371.88 Aligned_cols=258 Identities=22% Similarity=0.300 Sum_probs=210.5
Q ss_pred cccccceeEeeeeccCCcEEEEEEEEeCCceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEeceeecCC----
Q 003963 501 EILWEDLTIGEQIGQGSCGTVYHAVWYGSQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQ---- 576 (783)
Q Consensus 501 e~~~~~y~i~~~LG~G~fG~Vy~a~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~---- 576 (783)
+....+|++.++||+|+||.||+|.+..+..||+|++...... ..+|+.+++.++|||||++++++...+
T Consensus 36 ~~~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~aikk~~~~~~~------~~~E~~il~~l~h~niv~l~~~~~~~~~~~~ 109 (394)
T 4e7w_A 36 EQREIAYTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQDKRF------KNRELQIMRIVKHPNVVDLKAFFYSNGDKKD 109 (394)
T ss_dssp CEEEEEEEEEEEEEEETTEEEEEEEETTTEEEEEEEEECCTTS------CCHHHHHHHTCCCTTBCCEEEEEEEESSSSS
T ss_pred CcccceEEEeEEEeeCCCeEEEEEEECCCCeEEEEEEecCcch------HHHHHHHHHhCCCCCcceEEEEEEecCCCCC
Confidence 3445789999999999999999999987778999988654322 236999999999999999999985443
Q ss_pred --ceEEEEEecCCCCHHHHHh---hcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEc-CCCcEEEEec
Q 003963 577 --RLCIVTEFLPRGSLFRLLQ---RNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVD-KHWTVKVGDF 650 (783)
Q Consensus 577 --~~~lV~E~~~ggsL~~~L~---~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~-~~~~vkL~DF 650 (783)
.+++|||||++ +|...+. .....+++..++.++.||+.||+|||+++ |+||||||+||||+ .++.+||+||
T Consensus 110 ~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~--ivHrDlkp~Nill~~~~~~~kL~DF 186 (394)
T 4e7w_A 110 EVFLNLVLEYVPE-TVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSIG--ICHRDIKPQNLLLDPPSGVLKLIDF 186 (394)
T ss_dssp CEEEEEEEECCSE-EHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTT--EECSCCSGGGEEEETTTTEEEECCC
T ss_pred ceEEEEEeeccCc-cHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCC--ccCCCCCHHHEEEcCCCCcEEEeeC
Confidence 38899999976 4544432 23456899999999999999999999998 99999999999999 7899999999
Q ss_pred CCCcccccccccccCCCCCCcccCcccccCC-CCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccccc-----
Q 003963 651 GLSRLKHETYLTTKTGKGTPQWMAPEVLRNE-PSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQR----- 724 (783)
Q Consensus 651 Gla~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~-~~s~~sDIwSLG~il~elltG~~Pf~~~~~~~~~~~i~~~~~~----- 724 (783)
|+++...... ......||+.|+|||++.+. .++.++|||||||++|+|++|++||.+.+....+..+......
T Consensus 187 G~a~~~~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~p~~~~ 265 (394)
T 4e7w_A 187 GSAKILIAGE-PNVSYICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGIDQLVEIIKVLGTPSREQ 265 (394)
T ss_dssp TTCEECCTTC-CCCSSCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHH
T ss_pred CCcccccCCC-CCcccccCcCccCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHH
Confidence 9998654432 23355789999999998775 4899999999999999999999999988776555443221000
Q ss_pred ----------------------ccCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhcCcCC
Q 003963 725 ----------------------LEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQASRST 774 (783)
Q Consensus 725 ----------------------~~~~~~~s~~l~~LI~~cL~~dP~~RPsa~ell~~L~~L~~~~f~~~~~~ 774 (783)
..++..+++++.+||.+||..||.+|||+.++ +.|+||+..+..
T Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~------l~hp~f~~~~~~ 331 (394)
T 4e7w_A 266 IKTMNPNYMEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEA------LCHPFFDELRTG 331 (394)
T ss_dssp HHHHCGGGSSSCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHH------HTSGGGSTTTSS
T ss_pred HHhhChhhhhhccccccCCcHHHhccccCCHHHHHHHHHHhCCChhhCCCHHHH------hcChhhhhhccc
Confidence 11334588999999999999999999999999 679999877654
No 186
>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.7e-41 Score=373.37 Aligned_cols=259 Identities=22% Similarity=0.361 Sum_probs=213.7
Q ss_pred ccccceeEeeeeccCCcEEEEEEEEe----CCceEEEEEEecccC--CHHHHHHHHHHHHHHHhC-CCCceeeEeceeec
Q 003963 502 ILWEDLTIGEQIGQGSCGTVYHAVWY----GSQDVAVKVFSRQEY--SDEVIHSFRQEVSLMKRL-RHPNVLLFMGAVTS 574 (783)
Q Consensus 502 ~~~~~y~i~~~LG~G~fG~Vy~a~~~----~~~~vAiK~i~~~~~--~~~~~~~~~~Ei~il~~l-~HpnIv~l~~~~~~ 574 (783)
...++|++.++||+|+||.||+|.+. .++.||||++..... .......+.+|+.+|+.+ +||||+++++++..
T Consensus 51 ~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~ 130 (355)
T 1vzo_A 51 VGIENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQT 130 (355)
T ss_dssp CCGGGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEE
T ss_pred ccccceEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEee
Confidence 44579999999999999999999984 457899999865321 111223466799999999 69999999999999
Q ss_pred CCceEEEEEecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCc
Q 003963 575 PQRLCIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSR 654 (783)
Q Consensus 575 ~~~~~lV~E~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~ 654 (783)
...+++|||||++++|.+++... ..+++..++.++.||+.||.|||+++ |+||||||+||||+.++.+||+|||+++
T Consensus 131 ~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~aL~~LH~~~--ivH~Dlkp~NIll~~~~~~kl~DfG~a~ 207 (355)
T 1vzo_A 131 ETKLHLILDYINGGELFTHLSQR-ERFTEHEVQIYVGEIVLALEHLHKLG--IIYRDIKLENILLDSNGHVVLTDFGLSK 207 (355)
T ss_dssp TTEEEEEECCCCSCBHHHHHHHH-SCCCHHHHHHHHHHHHHHHHHHHHTT--CCCCCCCGGGEEECTTSCEEESCSSEEE
T ss_pred CceEEEEeecCCCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCC--cccCCCCHHHEEECCCCcEEEeeCCCCe
Confidence 99999999999999999999764 36899999999999999999999998 9999999999999999999999999987
Q ss_pred ccccc-cccccCCCCCCcccCcccccCC--CCCchhHHHHHHHHHHHHHcCCCCCCCCC----hHHHHHHhhcccccccC
Q 003963 655 LKHET-YLTTKTGKGTPQWMAPEVLRNE--PSDEKSDVYSFGVILWELATEKIPWDNLN----SMQVIGAVGFMNQRLEI 727 (783)
Q Consensus 655 ~~~~~-~~~~~~~~Gt~~Y~aPE~~~~~--~~s~~sDIwSLG~il~elltG~~Pf~~~~----~~~~~~~i~~~~~~~~~ 727 (783)
..... .......+||+.|+|||++.+. .++.++|||||||+||+|++|..||.... .......+ ......+
T Consensus 208 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~--~~~~~~~ 285 (355)
T 1vzo_A 208 EFVADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRI--LKSEPPY 285 (355)
T ss_dssp ECCGGGGGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCCHHHHHHHH--HHCCCCC
T ss_pred ecccCCCCcccCcccCcCccChhhhcCCCCCCCchhhHHHHHHHHHHHHHCCCCCccCCccchHHHHHHHH--hccCCCC
Confidence 65332 2223345789999999999863 46899999999999999999999996432 22222222 2345567
Q ss_pred CCCCCHHHHHHHHHhhhhCCCCCC-----CHHHHHHHHHHHHHHHhhcC
Q 003963 728 PKDVDPRWAAIVESCWHSDPQCRP-----SFQELVDKLRDLQRQYFQAS 771 (783)
Q Consensus 728 ~~~~s~~l~~LI~~cL~~dP~~RP-----sa~ell~~L~~L~~~~f~~~ 771 (783)
+..++..+.+||.+||..||.+|| ++.++ ++|+||+..
T Consensus 286 ~~~~~~~~~~li~~~L~~dP~~R~~~~~~s~~el------l~h~~f~~~ 328 (355)
T 1vzo_A 286 PQEMSALAKDLIQRLLMKDPKKRLGCGPRDADEI------KEHLFFQKI 328 (355)
T ss_dssp CTTSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHH------HTSGGGTTC
T ss_pred CcccCHHHHHHHHHHhhhCHHHhcCCCCCCHHHH------HcCcchhcC
Confidence 788999999999999999999999 99999 678898754
No 187
>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}
Probab=100.00 E-value=1.4e-40 Score=358.42 Aligned_cols=264 Identities=25% Similarity=0.399 Sum_probs=201.1
Q ss_pred ccccccccceeEeeeeccCCcEEEEEEEEe-CCceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEeceeecCC
Q 003963 498 LDYEILWEDLTIGEQIGQGSCGTVYHAVWY-GSQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQ 576 (783)
Q Consensus 498 ~~~e~~~~~y~i~~~LG~G~fG~Vy~a~~~-~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~ 576 (783)
..|....++|++.+.||+|+||.||+|.+. .++.||||++............+.++..+++.++||||+++++++...+
T Consensus 18 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~ 97 (318)
T 2dyl_A 18 QRYQAEINDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFITNT 97 (318)
T ss_dssp SEEECCGGGEEEEEEC------CEEEEEETTTCCEEEEEEEETTSCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSS
T ss_pred hhhhhhhccccccceeeecCCeeEEEEEEecCCeEEEEEEecccccchHHHHHHHHHHHHHHhcCCCceeeEEEEEecCC
Confidence 456677899999999999999999999986 4578999999876654444555666667788899999999999999999
Q ss_pred ceEEEEEecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhC-CCCEEecCCCCCCEEEcCCCcEEEEecCCCcc
Q 003963 577 RLCIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHC-NPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRL 655 (783)
Q Consensus 577 ~~~lV~E~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~-~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~ 655 (783)
.+++||||+ ++.+..++......+++..++.++.||+.||.|||+. + |+|+||||+|||++.++.+||+|||++..
T Consensus 98 ~~~lv~e~~-~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~--i~H~dlkp~Nil~~~~~~~kl~dfg~~~~ 174 (318)
T 2dyl_A 98 DVFIAMELM-GTCAEKLKKRMQGPIPERILGKMTVAIVKALYYLKEKHG--VIHRDVKPSNILLDERGQIKLCDFGISGR 174 (318)
T ss_dssp EEEEEECCC-SEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHHHC--CCCCCCCGGGEEECTTSCEEECCCTTC--
T ss_pred cEEEEEecc-CCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhhCC--EEeCCCCHHHEEECCCCCEEEEECCCchh
Confidence 999999999 6677777665566799999999999999999999985 8 99999999999999999999999999876
Q ss_pred cccccccccCCCCCCcccCccccc-----CCCCCchhHHHHHHHHHHHHHcCCCCCCCCC-hHHHHHHhhcc-cccccCC
Q 003963 656 KHETYLTTKTGKGTPQWMAPEVLR-----NEPSDEKSDVYSFGVILWELATEKIPWDNLN-SMQVIGAVGFM-NQRLEIP 728 (783)
Q Consensus 656 ~~~~~~~~~~~~Gt~~Y~aPE~~~-----~~~~s~~sDIwSLG~il~elltG~~Pf~~~~-~~~~~~~i~~~-~~~~~~~ 728 (783)
..... ......|++.|+|||++. +..++.++|||||||++|+|++|..||.... .......+... ....+..
T Consensus 175 ~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 253 (318)
T 2dyl_A 175 LVDDK-AKDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTDFEVLTKVLQEEPPLLPGH 253 (318)
T ss_dssp -------------CCTTCCHHHHC--------CCTHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHHHHHHSCCCCCCSS
T ss_pred ccCCc-cccccCCCccccChhhcccccccccCCccccchhhHHHHHHHHHhCCCCCCCCCccHHHHHHHhccCCCCCCcc
Confidence 54432 223456899999999984 5567899999999999999999999998743 33333333211 1122223
Q ss_pred CCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhcC
Q 003963 729 KDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQAS 771 (783)
Q Consensus 729 ~~~s~~l~~LI~~cL~~dP~~RPsa~ell~~L~~L~~~~f~~~ 771 (783)
..+++++.+||.+||..||.+||++.++ ++|+||+..
T Consensus 254 ~~~~~~l~~li~~~l~~dp~~Rps~~~l------l~h~~~~~~ 290 (318)
T 2dyl_A 254 MGFSGDFQSFVKDCLTKDHRKRPKYNKL------LEHSFIKRY 290 (318)
T ss_dssp SCCCHHHHHHHHHHTCSCTTTSCCHHHH------TTSHHHHHH
T ss_pred CCCCHHHHHHHHHHccCChhHCcCHHHH------hhCHHHHhc
Confidence 4689999999999999999999999999 567777654
No 188
>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=8e-41 Score=371.66 Aligned_cols=255 Identities=22% Similarity=0.327 Sum_probs=208.5
Q ss_pred ccccceeEeeeeccCCcEEEEEEEEeC-CceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEeceeec------
Q 003963 502 ILWEDLTIGEQIGQGSCGTVYHAVWYG-SQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTS------ 574 (783)
Q Consensus 502 ~~~~~y~i~~~LG~G~fG~Vy~a~~~~-~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~------ 574 (783)
...++|++.++||+|+||.||+|.+.. ++.||||++...... ..+|+.+++.++|||||++++++..
T Consensus 4 ~~~~~y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~~------~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~ 77 (383)
T 3eb0_A 4 TSSKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPRY------KNRELDIMKVLDHVNIIKLVDYFYTTGDEEP 77 (383)
T ss_dssp --CTTEEEEEEEECC-CEEEEEEEETTTCCEEEEEEEECCTTS------CCHHHHHHTTCCCTTBCCEEEEEEEC-----
T ss_pred cccceEEEEEEEEeccCEEEEEEEECCCCCEEEEEEEecCcch------HHHHHHHHHHcCCCCccchhheeeecCcccc
Confidence 445789999999999999999999854 578999998765322 2369999999999999999999843
Q ss_pred --------------------------------CCceEEEEEecCCCCHHHHHhh---cCCcchHHHHHHHHHHHHHHHHH
Q 003963 575 --------------------------------PQRLCIVTEFLPRGSLFRLLQR---NTTKLDWRRRILMALDIARGVSY 619 (783)
Q Consensus 575 --------------------------------~~~~~lV~E~~~ggsL~~~L~~---~~~~l~~~~~~~i~~qi~~aL~~ 619 (783)
...+++||||++ ++|.+.+.. ....+++..++.++.||+.||.|
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~ 156 (383)
T 3eb0_A 78 KPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVP-DTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGF 156 (383)
T ss_dssp --------------------------------CCEEEEEECCCS-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHH
T ss_pred cccccccccccccccccccccccccccccCCCceEEEEEEecCC-ccHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHH
Confidence 334889999997 588777753 35569999999999999999999
Q ss_pred HHhCCCCEEecCCCCCCEEEc-CCCcEEEEecCCCcccccccccccCCCCCCcccCcccccCCC-CCchhHHHHHHHHHH
Q 003963 620 LHHCNPPIIHRDLKSSNLLVD-KHWTVKVGDFGLSRLKHETYLTTKTGKGTPQWMAPEVLRNEP-SDEKSDVYSFGVILW 697 (783)
Q Consensus 620 LH~~~~~IvHrDIKp~NILl~-~~~~vkL~DFGla~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~-~s~~sDIwSLG~il~ 697 (783)
||++| |+||||||+||||+ .++.+||+|||+++...... ......||+.|+|||++.+.. ++.++|||||||++|
T Consensus 157 LH~~g--i~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ 233 (383)
T 3eb0_A 157 IHSLG--ICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSE-PSVAYICSRFYRAPELMLGATEYTPSIDLWSIGCVFG 233 (383)
T ss_dssp HHTTT--EECSCCCGGGEEEETTTTEEEECCCTTCEECCTTS-CCCCCCCCSSCCCHHHHTTCSSCCTHHHHHHHHHHHH
T ss_pred HHHCc--CccCccCHHHEEEcCCCCcEEEEECCCCcccCCCC-CCcCcccCCCccCHHHhcCCCCCCcchhhhhHHHHHH
Confidence 99998 99999999999997 68899999999998654432 233557899999999988754 899999999999999
Q ss_pred HHHcCCCCCCCCChHHHHHHhhcccc---------------------------cccCCCCCCHHHHHHHHHhhhhCCCCC
Q 003963 698 ELATEKIPWDNLNSMQVIGAVGFMNQ---------------------------RLEIPKDVDPRWAAIVESCWHSDPQCR 750 (783)
Q Consensus 698 elltG~~Pf~~~~~~~~~~~i~~~~~---------------------------~~~~~~~~s~~l~~LI~~cL~~dP~~R 750 (783)
+|++|++||...+....+..+..... ...++..+++++.+||.+||..||.+|
T Consensus 234 ell~g~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R 313 (383)
T 3eb0_A 234 ELILGKPLFSGETSIDQLVRIIQIMGTPTKEQMIRMNPHYTEVRFPTLKAKDWRKILPEGTPSLAIDLLEQILRYEPDLR 313 (383)
T ss_dssp HHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCTTC--CCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGS
T ss_pred HHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhCcccccccCCccCcccHHhhCCCCCCHHHHHHHHHHccCChhhC
Confidence 99999999998877665544422111 111455688999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHHhhcCc
Q 003963 751 PSFQELVDKLRDLQRQYFQASR 772 (783)
Q Consensus 751 Psa~ell~~L~~L~~~~f~~~~ 772 (783)
||+.++ |+|+||+..+
T Consensus 314 ~t~~e~------l~hp~f~~~~ 329 (383)
T 3eb0_A 314 INPYEA------MAHPFFDHLR 329 (383)
T ss_dssp CCHHHH------HTSGGGHHHH
T ss_pred CCHHHH------hcCHHHHHHH
Confidence 999999 6788887654
No 189
>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...
Probab=100.00 E-value=9.9e-41 Score=375.88 Aligned_cols=255 Identities=23% Similarity=0.303 Sum_probs=207.0
Q ss_pred ccceeEeeeeccCCcEEEEEEEEeC-CceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEeceeecC------C
Q 003963 504 WEDLTIGEQIGQGSCGTVYHAVWYG-SQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSP------Q 576 (783)
Q Consensus 504 ~~~y~i~~~LG~G~fG~Vy~a~~~~-~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~------~ 576 (783)
..+|++.++||+|+||.||+|.+.. ++.||||++..... .+.+|+.+|+.++|||||+++++|... .
T Consensus 53 ~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~~------~~~~E~~il~~l~hpniv~l~~~~~~~~~~~~~~ 126 (420)
T 1j1b_A 53 EVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR------FKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEV 126 (420)
T ss_dssp EEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECCTT------SCCHHHHHHHTCCCTTBCCEEEEEEEEETTTTEE
T ss_pred cceEEeeeEEeeCCCEEEEEEEECCCCcEEEEEEecccch------hHHHHHHHHHHcCCCCccceeeEEeccCCCCcce
Confidence 4579999999999999999999864 57899999876432 223699999999999999999988432 2
Q ss_pred ceEEEEEecCCCCHHHHHh---hcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCC-CcEEEEecCC
Q 003963 577 RLCIVTEFLPRGSLFRLLQ---RNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKH-WTVKVGDFGL 652 (783)
Q Consensus 577 ~~~lV~E~~~ggsL~~~L~---~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~-~~vkL~DFGl 652 (783)
++++||||+++ +|.+++. .....+++..++.++.||+.||+|||+++ |+||||||+||||+.+ +.+||+|||+
T Consensus 127 ~~~lv~e~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~--ivHrDlkp~NILl~~~~~~~kl~DFG~ 203 (420)
T 1j1b_A 127 YLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGS 203 (420)
T ss_dssp EEEEEEECCCE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTTT--EECSCCSGGGEEEETTTTEEEECCCTT
T ss_pred eEEeehhcccc-cHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCC--ccccCCChhhEEEeCCCCeEEeccchh
Confidence 47899999975 7776664 23566999999999999999999999998 9999999999999955 6789999999
Q ss_pred CcccccccccccCCCCCCcccCcccccCC-CCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccc---------
Q 003963 653 SRLKHETYLTTKTGKGTPQWMAPEVLRNE-PSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMN--------- 722 (783)
Q Consensus 653 a~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~-~~s~~sDIwSLG~il~elltG~~Pf~~~~~~~~~~~i~~~~--------- 722 (783)
++...... .....+||+.|+|||++.+. .++.++|||||||+||||++|++||...+....+..+....
T Consensus 204 a~~~~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~~l~~i~~~lg~p~~~~~~ 282 (420)
T 1j1b_A 204 AKQLVRGE-PNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIR 282 (420)
T ss_dssp CEECCTTC-CCCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHHHH
T ss_pred hhhcccCC-CceeeeeCCCcCCHHHHcCCCCCCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHH
Confidence 98654332 23356789999999999775 68999999999999999999999999887665444332110
Q ss_pred ------cccc------------CCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhcCcCC
Q 003963 723 ------QRLE------------IPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQASRST 774 (783)
Q Consensus 723 ------~~~~------------~~~~~s~~l~~LI~~cL~~dP~~RPsa~ell~~L~~L~~~~f~~~~~~ 774 (783)
.... ++..+++++.+||.+||..||.+||++.++ +.|+||+..+..
T Consensus 283 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~Li~~~L~~dP~~R~t~~e~------l~hp~f~~~~~~ 346 (420)
T 1j1b_A 283 EMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEA------CAHSFFDELRDP 346 (420)
T ss_dssp HHCSCCCCCCCCCCCCCCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCCHHHH------HTSGGGGGGGCT
T ss_pred hhChhhhhhccCccCCCCHHHhcCCCCCHHHHHHHHHhccCChhHCCCHHHH------hCCHhhcccccc
Confidence 0011 234578999999999999999999999999 679999876543
No 190
>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}
Probab=100.00 E-value=1.7e-40 Score=355.75 Aligned_cols=261 Identities=24% Similarity=0.436 Sum_probs=217.0
Q ss_pred cccceeEeeeeccCCcEEEEEEEEeC-CceEEEEEEecccCC--HHHHHHHHHHHHHHHhCCCCceeeEeceee--cCCc
Q 003963 503 LWEDLTIGEQIGQGSCGTVYHAVWYG-SQDVAVKVFSRQEYS--DEVIHSFRQEVSLMKRLRHPNVLLFMGAVT--SPQR 577 (783)
Q Consensus 503 ~~~~y~i~~~LG~G~fG~Vy~a~~~~-~~~vAiK~i~~~~~~--~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~--~~~~ 577 (783)
..++|++.+.||+|+||.||++.+.. ++.||+|++...... ......+.+|+.+++.++||||+++++++. ....
T Consensus 3 l~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~ 82 (305)
T 2wtk_C 3 LIGKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQK 82 (305)
T ss_dssp --CCBCCCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECC---C
T ss_pred cccceeEeeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCCCe
Confidence 35789999999999999999999854 468999999764321 234567899999999999999999999984 4568
Q ss_pred eEEEEEecCCCCHHHHHhh-cCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCccc
Q 003963 578 LCIVTEFLPRGSLFRLLQR-NTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLK 656 (783)
Q Consensus 578 ~~lV~E~~~ggsL~~~L~~-~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~ 656 (783)
.|+||||++++ |.+++.. ....+++..++.++.||+.||.|||+++ |+||||||+|||++.++.+||+|||++...
T Consensus 83 ~~lv~e~~~~~-l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~--i~H~dlkp~NIl~~~~~~~kl~dfg~~~~~ 159 (305)
T 2wtk_C 83 MYMVMEYCVCG-MQEMLDSVPEKRFPVCQAHGYFCQLIDGLEYLHSQG--IVHKDIKPGNLLLTTGGTLKISALGVAEAL 159 (305)
T ss_dssp EEEEEECCSEE-HHHHHHHSTTCSCCHHHHHHHHHHHHHHHHHHHHTT--EECSCCSGGGEEECTTCCEEECCCTTCEEC
T ss_pred EEEEehhccCC-HHHHHHhCcccccCHHHHHHHHHHHHHHHHHHHHCC--eeecCCCcccEEEcCCCcEEeecccccccc
Confidence 99999999775 7777754 3456899999999999999999999998 999999999999999999999999999765
Q ss_pred ccc--cccccCCCCCCcccCcccccCCCC--CchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhcccccccCCCCCC
Q 003963 657 HET--YLTTKTGKGTPQWMAPEVLRNEPS--DEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLEIPKDVD 732 (783)
Q Consensus 657 ~~~--~~~~~~~~Gt~~Y~aPE~~~~~~~--s~~sDIwSLG~il~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s 732 (783)
... ........||+.|+|||++.+... +.++|||||||++|+|++|..||...+.......+. .....++..++
T Consensus 160 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~i~--~~~~~~~~~~~ 237 (305)
T 2wtk_C 160 HPFAADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDNIYKLFENIG--KGSYAIPGDCG 237 (305)
T ss_dssp CTTCSSCEECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHH--HCCCCCCSSSC
T ss_pred CccccccccccCCCCCCCcChhhccCcccCCcchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHHHh--cCCCCCCCccC
Confidence 432 122335568999999999987544 789999999999999999999999888777666653 23456778899
Q ss_pred HHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhcCcCC
Q 003963 733 PRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQASRST 774 (783)
Q Consensus 733 ~~l~~LI~~cL~~dP~~RPsa~ell~~L~~L~~~~f~~~~~~ 774 (783)
+.+.+||.+||..||.+||++.++ ++|+||+.....
T Consensus 238 ~~l~~li~~~l~~dp~~Rps~~~l------l~~~~~~~~~~~ 273 (305)
T 2wtk_C 238 PPLSDLLKGMLEYEPAKRFSIRQI------RQHSWFRKKHPP 273 (305)
T ss_dssp HHHHHHHHHHTCSSTTTSCCHHHH------HHSHHHHSCCCC
T ss_pred HHHHHHHHHHccCChhhCCCHHHH------hcCcccccCCCC
Confidence 999999999999999999999999 678999776543
No 191
>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}
Probab=100.00 E-value=3.6e-41 Score=368.98 Aligned_cols=257 Identities=21% Similarity=0.245 Sum_probs=202.8
Q ss_pred cccccceeEeeeeccCCcEEEEEEEEeC----CceEEEEEEecccCCHH---------HHHHHHHHHHHHHhCCCCceee
Q 003963 501 EILWEDLTIGEQIGQGSCGTVYHAVWYG----SQDVAVKVFSRQEYSDE---------VIHSFRQEVSLMKRLRHPNVLL 567 (783)
Q Consensus 501 e~~~~~y~i~~~LG~G~fG~Vy~a~~~~----~~~vAiK~i~~~~~~~~---------~~~~~~~Ei~il~~l~HpnIv~ 567 (783)
++..++|++.++||+|+||.||+|.+.. ...||||++........ ....+.+|+.+++.++||||++
T Consensus 33 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~ 112 (345)
T 2v62_A 33 DMEGNQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPL 112 (345)
T ss_dssp CTTSCEEEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCC
T ss_pred cccCceEEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcce
Confidence 4556799999999999999999999863 46799999876542110 1123567888999999999999
Q ss_pred Eeceeec----CCceEEEEEecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCC
Q 003963 568 FMGAVTS----PQRLCIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHW 643 (783)
Q Consensus 568 l~~~~~~----~~~~~lV~E~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~ 643 (783)
+++++.. ...+|+||||+ +++|.+++.... .+++..++.++.||+.||+|||+++ |+||||||+||||+.++
T Consensus 113 ~~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~-~~~~~~~~~i~~qi~~aL~~LH~~~--ivH~Dlkp~NIll~~~~ 188 (345)
T 2v62_A 113 FYGSGLTEFKGRSYRFMVMERL-GIDLQKISGQNG-TFKKSTVLQLGIRMLDVLEYIHENE--YVHGDIKAANLLLGYKN 188 (345)
T ss_dssp EEEEEEEESSSCEEEEEEEECE-EEEHHHHCBGGG-BCCHHHHHHHHHHHHHHHHHHHHTT--EECSCCSGGGEEEESSS
T ss_pred eecccccccCCCcEEEEEEecc-CCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhCC--eeCCCcCHHHEEEccCC
Confidence 9999887 67899999999 999999997654 7999999999999999999999998 99999999999998877
Q ss_pred --cEEEEecCCCcccccccc-------cccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCC--ChH
Q 003963 644 --TVKVGDFGLSRLKHETYL-------TTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNL--NSM 712 (783)
Q Consensus 644 --~vkL~DFGla~~~~~~~~-------~~~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~elltG~~Pf~~~--~~~ 712 (783)
.+||+|||+++....... ......||+.|+|||++.+..++.++|||||||++|+|++|..||... +..
T Consensus 189 ~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~ 268 (345)
T 2v62_A 189 PDQVYLADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCMLRWLCGKLPWEQNLKDPV 268 (345)
T ss_dssp TTSEEECCCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCTTGGGTTCHH
T ss_pred CCcEEEEeCCCceecccccccccchhccccccCCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCccccccccH
Confidence 999999999976543211 113457999999999999999999999999999999999999999542 222
Q ss_pred HHHHHhhcccccccCC---------CCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHH
Q 003963 713 QVIGAVGFMNQRLEIP---------KDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDL 763 (783)
Q Consensus 713 ~~~~~i~~~~~~~~~~---------~~~s~~l~~LI~~cL~~dP~~RPsa~ell~~L~~L 763 (783)
....... .....++ ..+++++.+||..||..||.+||++.+|++.|+.+
T Consensus 269 ~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~ 326 (345)
T 2v62_A 269 AVQTAKT--NLLDELPQSVLKWAPSGSSCCEIAQFLVCAHSLAYDEKPNYQALKKILNPH 326 (345)
T ss_dssp HHHHHHH--HHHHTTTHHHHHHSCTTSCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHCTT
T ss_pred HHHHHHH--hhcccccHHHHhhccccccHHHHHHHHHHHhhcCcccCCCHHHHHHHHhcc
Confidence 2211111 1111112 27899999999999999999999999999887654
No 192
>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...
Probab=100.00 E-value=3.2e-40 Score=365.41 Aligned_cols=255 Identities=26% Similarity=0.336 Sum_probs=205.4
Q ss_pred cccceeEeeeeccCCcEEEEEEEEeC-CceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEeceeecCC-----
Q 003963 503 LWEDLTIGEQIGQGSCGTVYHAVWYG-SQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQ----- 576 (783)
Q Consensus 503 ~~~~y~i~~~LG~G~fG~Vy~a~~~~-~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~----- 576 (783)
..++|++.+.||+|+||.||+|.+.. ++.||||++............+.+|+.+++.++||||+++++++....
T Consensus 23 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~ 102 (371)
T 2xrw_A 23 VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEF 102 (371)
T ss_dssp EETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTTTC
T ss_pred hhhheeEeeeeEecCCEEEEEEEECCCCceEEEEEeccccCChHHHHHHHHHHHHHHhcCCCCccceEEeeccccccccc
Confidence 45799999999999999999999864 567999999876666667778899999999999999999999997655
Q ss_pred -ceEEEEEecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCcc
Q 003963 577 -RLCIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRL 655 (783)
Q Consensus 577 -~~~lV~E~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~ 655 (783)
.+|+|||||+ ++|.+++.. .+++..+..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||++..
T Consensus 103 ~~~~lv~e~~~-~~l~~~~~~---~~~~~~~~~i~~qi~~al~~lH~~~--ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~ 176 (371)
T 2xrw_A 103 QDVYIVMELMD-ANLCQVIQM---ELDHERMSYLLYQMLCGIKHLHSAG--IIHRDLKPSNIVVKSDCTLKILDFGLART 176 (371)
T ss_dssp CEEEEEEECCS-EEHHHHHHS---CCCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCCGGGEEECTTSCEEECCCCC---
T ss_pred cceEEEEEcCC-CCHHHHHhh---ccCHHHHHHHHHHHHHHHHHHHHCC--eecccCCHHHEEEcCCCCEEEEEeecccc
Confidence 6899999996 488888853 4889999999999999999999998 99999999999999999999999999976
Q ss_pred cccccccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccccc-----------
Q 003963 656 KHETYLTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQR----------- 724 (783)
Q Consensus 656 ~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~elltG~~Pf~~~~~~~~~~~i~~~~~~----------- 724 (783)
..... .....+||+.|+|||++.+..++.++|||||||++|+|++|..||...+.......+......
T Consensus 177 ~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 255 (371)
T 2xrw_A 177 AGTSF-MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQP 255 (371)
T ss_dssp --------------CTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHC-CCCCCHHHHTTSCH
T ss_pred ccccc-ccCCceecCCccCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHhhh
Confidence 54432 223457899999999999999999999999999999999999999988776655443221110
Q ss_pred ---------cc--------------CCC------CCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhc
Q 003963 725 ---------LE--------------IPK------DVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQA 770 (783)
Q Consensus 725 ---------~~--------------~~~------~~s~~l~~LI~~cL~~dP~~RPsa~ell~~L~~L~~~~f~~ 770 (783)
.. .+. ..++++.+||.+||..||.+|||+.++ |+|+||+.
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~------l~hp~~~~ 324 (371)
T 2xrw_A 256 TVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEA------LQHPYINV 324 (371)
T ss_dssp HHHHHHHSSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSGGGSCCHHHH------HHSHHHHT
T ss_pred HHHHHHhhCccccccchhhhcccccCcccccccccccHHHHHHHHHHCcCChhhCCCHHHH------hCCcchhh
Confidence 00 010 015679999999999999999999999 67899964
No 193
>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...
Probab=100.00 E-value=6.7e-41 Score=370.62 Aligned_cols=256 Identities=26% Similarity=0.348 Sum_probs=199.5
Q ss_pred ccceeEeeeeccCCcEEEEEEEEeC-CceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEeceeecC------C
Q 003963 504 WEDLTIGEQIGQGSCGTVYHAVWYG-SQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSP------Q 576 (783)
Q Consensus 504 ~~~y~i~~~LG~G~fG~Vy~a~~~~-~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~------~ 576 (783)
.++|++++.||+|+||.||+|.+.. ++.||||++............+.+|+.+++.++||||+++++++... .
T Consensus 28 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~ 107 (367)
T 2fst_X 28 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFN 107 (367)
T ss_dssp ETTEEEEEECC----CCEEEEEETTTTEEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCC
T ss_pred CCceEEeeEEeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCccccCC
Confidence 4799999999999999999999754 56799999977655666677889999999999999999999998654 5
Q ss_pred ceEEEEEecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCccc
Q 003963 577 RLCIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLK 656 (783)
Q Consensus 577 ~~~lV~E~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~ 656 (783)
.+|+||||+ +++|.+++.. ..+++..++.++.||+.||.|||++| |+||||||+||||+.++.+||+|||+++..
T Consensus 108 ~~~lv~e~~-~~~L~~~~~~--~~l~~~~~~~i~~qi~~aL~~LH~~g--ivH~Dlkp~NIll~~~~~~kL~DFG~a~~~ 182 (367)
T 2fst_X 108 DVYLVTHLM-GADLNNIVKC--QKLTDDHVQFLIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHT 182 (367)
T ss_dssp CCEEEEECC-CEECC-------CCCCHHHHHHHHHHHHHHHHHHHHTT--CCCCCCCGGGEEECTTCCEEECC-------
T ss_pred eEEEEeccc-CCCHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCC--eeeCCCCHhhEEECCCCCEEEeeccccccc
Confidence 689999999 7899999875 45899999999999999999999998 999999999999999999999999999765
Q ss_pred ccccccccCCCCCCcccCcccccC-CCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccccc-----------
Q 003963 657 HETYLTTKTGKGTPQWMAPEVLRN-EPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQR----------- 724 (783)
Q Consensus 657 ~~~~~~~~~~~Gt~~Y~aPE~~~~-~~~s~~sDIwSLG~il~elltG~~Pf~~~~~~~~~~~i~~~~~~----------- 724 (783)
... ....+||+.|+|||++.+ ..++.++|||||||++|+|++|++||.+.+....+..+......
T Consensus 183 ~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~p~~~~~~~~~~ 259 (367)
T 2fst_X 183 ADE---MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISS 259 (367)
T ss_dssp -----------CCCTTCCHHHHTTCCSCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHTTCCC
T ss_pred ccc---CCCcCcCcCccChHHHcCCcCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHhhh
Confidence 432 234578999999999987 67899999999999999999999999988776555443211100
Q ss_pred ----------c--------cCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhcCcC
Q 003963 725 ----------L--------EIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQASRS 773 (783)
Q Consensus 725 ----------~--------~~~~~~s~~l~~LI~~cL~~dP~~RPsa~ell~~L~~L~~~~f~~~~~ 773 (783)
. .....+++.+.+||.+||..||.+|||+.++ |.|+||+....
T Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~t~~e~------L~hp~~~~~~~ 320 (367)
T 2fst_X 260 ESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQA------LAHAYFAQYHD 320 (367)
T ss_dssp HHHHHHHHTSCCCCCCCHHHHTTTCCHHHHHHHHHHSCSSGGGSCCHHHH------HTSGGGTTTCC
T ss_pred HHHHHHHhccCCCCCCCHHHHCCCCCHHHHHHHHHhCCCCcccCcCHHHH------hcChhhhhccC
Confidence 0 1123568899999999999999999999999 68999976543
No 194
>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*
Probab=100.00 E-value=3.1e-40 Score=352.62 Aligned_cols=260 Identities=24% Similarity=0.402 Sum_probs=221.1
Q ss_pred cccceeEeeeeccCCcEEEEEEEEeC-CceEEEEEEecccC---C----HHHHHHHHHHHHHHHhCC-CCceeeEeceee
Q 003963 503 LWEDLTIGEQIGQGSCGTVYHAVWYG-SQDVAVKVFSRQEY---S----DEVIHSFRQEVSLMKRLR-HPNVLLFMGAVT 573 (783)
Q Consensus 503 ~~~~y~i~~~LG~G~fG~Vy~a~~~~-~~~vAiK~i~~~~~---~----~~~~~~~~~Ei~il~~l~-HpnIv~l~~~~~ 573 (783)
..++|++.+.||+|+||.||+|.+.. ++.||||++..... . ......+.+|+.+++.+. ||||+++++++.
T Consensus 15 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~ 94 (298)
T 1phk_A 15 FYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYE 94 (298)
T ss_dssp CTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEE
T ss_pred hhhccceeeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeeec
Confidence 45789999999999999999999865 57799999976531 1 234567889999999996 999999999999
Q ss_pred cCCceEEEEEecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCC
Q 003963 574 SPQRLCIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLS 653 (783)
Q Consensus 574 ~~~~~~lV~E~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla 653 (783)
.....++||||+++++|.+++... ..+++..++.++.||+.||.|||+++ |+|+||||+|||++.++.+||+|||++
T Consensus 95 ~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~--i~H~dl~p~Nil~~~~~~~kl~dfg~~ 171 (298)
T 1phk_A 95 TNTFFFLVFDLMKKGELFDYLTEK-VTLSEKETRKIMRALLEVICALHKLN--IVHRDLKPENILLDDDMNIKLTDFGFS 171 (298)
T ss_dssp CSSEEEEEEECCTTCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHHTT--EECSCCSGGGEEECTTCCEEECCCTTC
T ss_pred cCCeEEEEEeccCCCcHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHHCC--cccCCCCcceEEEcCCCcEEEecccch
Confidence 999999999999999999999764 46899999999999999999999998 999999999999999999999999999
Q ss_pred cccccccccccCCCCCCcccCccccc------CCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhcccccccC
Q 003963 654 RLKHETYLTTKTGKGTPQWMAPEVLR------NEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLEI 727 (783)
Q Consensus 654 ~~~~~~~~~~~~~~Gt~~Y~aPE~~~------~~~~s~~sDIwSLG~il~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~ 727 (783)
....... ......|++.|+|||++. ...++.++|||||||++|+|++|..||...+.......+.........
T Consensus 172 ~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~ 250 (298)
T 1phk_A 172 CQLDPGE-KLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGS 250 (298)
T ss_dssp EECCTTC-CBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCT
T ss_pred hhcCCCc-ccccccCCccccCHHHhccccccccccCCcccccHhHHHHHHHHHHCCCCCcCccHHHHHHHHhcCCcccCc
Confidence 7654332 233557899999999985 456789999999999999999999999988877666555433322222
Q ss_pred C--CCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhcCc
Q 003963 728 P--KDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQASR 772 (783)
Q Consensus 728 ~--~~~s~~l~~LI~~cL~~dP~~RPsa~ell~~L~~L~~~~f~~~~ 772 (783)
+ ..++..+.+||.+||..||.+|||+.++ ++|+||+...
T Consensus 251 ~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l------l~h~~~~~~~ 291 (298)
T 1phk_A 251 PEWDDYSDTVKDLVSRFLVVQPQKRYTAEEA------LAHPFFQQYV 291 (298)
T ss_dssp TTGGGSCHHHHHHHHHHCCSSGGGSCCHHHH------TTSGGGCTTC
T ss_pred ccccccCHHHHHHHHHHccCCcccCCCHHHH------HhChHhhhcc
Confidence 2 4688999999999999999999999999 6799997654
No 195
>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*
Probab=100.00 E-value=3.7e-40 Score=355.31 Aligned_cols=264 Identities=24% Similarity=0.384 Sum_probs=217.2
Q ss_pred ccccccceeEeeeeccCCcEEEEEEEEeCCceEEEEEEecccCCHHHHHHHHHHHHHHHhCC--CCceeeEeceeecCCc
Q 003963 500 YEILWEDLTIGEQIGQGSCGTVYHAVWYGSQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLR--HPNVLLFMGAVTSPQR 577 (783)
Q Consensus 500 ~e~~~~~y~i~~~LG~G~fG~Vy~a~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~--HpnIv~l~~~~~~~~~ 577 (783)
..+..++|++.+.||+|+||.||++.+..++.||||++............+.+|+.+++.++ ||||+++++++.....
T Consensus 23 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~ 102 (313)
T 3cek_A 23 MSVKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQY 102 (313)
T ss_dssp EEETTEEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGGGCTTBCCEEEEEECSSE
T ss_pred eeeccceEEEEEEecCCCCEEEEEEEcCCCcEEEEEEeccccccccchHHHHHHHHHHHhccccCCceEEEEEEeecCCE
Confidence 34566789999999999999999999877788999999887777777788999999999997 5999999999999999
Q ss_pred eEEEEEecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCcccc
Q 003963 578 LCIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKH 657 (783)
Q Consensus 578 ~~lV~E~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~ 657 (783)
+|+|||+ .+++|.+++... ..+++..++.++.||+.||.|||+++ |+||||||+|||+++ +.+||+|||++....
T Consensus 103 ~~lv~e~-~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~aL~~LH~~~--ivH~dlkp~NIl~~~-~~~kL~Dfg~~~~~~ 177 (313)
T 3cek_A 103 IYMVMEC-GNIDLNSWLKKK-KSIDPWERKSYWKNMLEAVHTIHQHG--IVHSDLKPANFLIVD-GMLKLIDFGIANQMQ 177 (313)
T ss_dssp EEEEECC-CSEEHHHHHHHC-SSCCHHHHHHHHHHHHHHHHHHHHTT--CCCCCCCGGGEEEET-TEEEECCCSSSCC--
T ss_pred EEEEEec-CCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCC--ceecCCCcccEEEEC-CeEEEeecccccccc
Confidence 9999995 478999999864 46899999999999999999999998 999999999999965 799999999997654
Q ss_pred cccc--cccCCCCCCcccCcccccC-----------CCCCchhHHHHHHHHHHHHHcCCCCCCCCCh-HHHHHHhhcccc
Q 003963 658 ETYL--TTKTGKGTPQWMAPEVLRN-----------EPSDEKSDVYSFGVILWELATEKIPWDNLNS-MQVIGAVGFMNQ 723 (783)
Q Consensus 658 ~~~~--~~~~~~Gt~~Y~aPE~~~~-----------~~~s~~sDIwSLG~il~elltG~~Pf~~~~~-~~~~~~i~~~~~ 723 (783)
.... ......|++.|+|||++.+ ..++.++|||||||++|+|++|..||..... ......+.....
T Consensus 178 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~ 257 (313)
T 3cek_A 178 PDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNH 257 (313)
T ss_dssp ------------CCGGGCCHHHHTTCC----------CCCHHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHHHHHCTTS
T ss_pred CccccccccCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHhccc
Confidence 3321 2234568999999999876 4678899999999999999999999976543 333333333344
Q ss_pred cccCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhcCcCC
Q 003963 724 RLEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQASRST 774 (783)
Q Consensus 724 ~~~~~~~~s~~l~~LI~~cL~~dP~~RPsa~ell~~L~~L~~~~f~~~~~~ 774 (783)
...++..++.++.+||.+||..||.+||++.++ ++|+||+.....
T Consensus 258 ~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~el------l~h~~~~~~~~~ 302 (313)
T 3cek_A 258 EIEFPDIPEKDLQDVLKCCLKRDPKQRISIPEL------LAHPYVQIQTHP 302 (313)
T ss_dssp CCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHH------HTSHHHHCC---
T ss_pred ccCCcccchHHHHHHHHHHccCCcccCcCHHHH------hcCccccCCCCc
Confidence 556777889999999999999999999999999 678999765443
No 196
>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*
Probab=100.00 E-value=1e-40 Score=367.03 Aligned_cols=262 Identities=20% Similarity=0.281 Sum_probs=211.8
Q ss_pred cccccceeEeeeeccCCcEEEEEEEEeCCceEEEEEEecccC---------CHHHHHHHHHHHHHHHhCCCCceeeEece
Q 003963 501 EILWEDLTIGEQIGQGSCGTVYHAVWYGSQDVAVKVFSRQEY---------SDEVIHSFRQEVSLMKRLRHPNVLLFMGA 571 (783)
Q Consensus 501 e~~~~~y~i~~~LG~G~fG~Vy~a~~~~~~~vAiK~i~~~~~---------~~~~~~~~~~Ei~il~~l~HpnIv~l~~~ 571 (783)
....++|++.+.||+|+||.||+|.+..++.||||++..... .....+.+.+|+.+++.++||||++++++
T Consensus 18 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~ 97 (362)
T 3pg1_A 18 HAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNILGLRDI 97 (362)
T ss_dssp HHTTCSCEEEEEEEEETTEEEEEEECTTSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEE
T ss_pred HHhccceEEeEEeccCCCEEEEEEECCCCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcCccceeee
Confidence 455789999999999999999999988788999999865432 23445788999999999999999999999
Q ss_pred eec-----CCceEEEEEecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEE
Q 003963 572 VTS-----PQRLCIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVK 646 (783)
Q Consensus 572 ~~~-----~~~~~lV~E~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vk 646 (783)
+.. ...+|+||||++ ++|.+++......+++..++.++.||+.||.|||+++ |+||||||+||||+.++.+|
T Consensus 98 ~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~--ivH~Dlkp~NIl~~~~~~~k 174 (362)
T 3pg1_A 98 FVHFEEPAMHKLYLVTELMR-TDLAQVIHDQRIVISPQHIQYFMYHILLGLHVLHEAG--VVHRDLHPGNILLADNNDIT 174 (362)
T ss_dssp EEECCTTTCCEEEEEEECCS-EEHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHHTT--CCCCCCCGGGEEECTTCCEE
T ss_pred EEeccCCCcceEEEEEccCC-CCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCc--CEecCCChHHEEEcCCCCEE
Confidence 843 346899999996 6999998876677999999999999999999999998 99999999999999999999
Q ss_pred EEecCCCcccccccccccCCCCCCcccCcccccC-CCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhcccc--
Q 003963 647 VGDFGLSRLKHETYLTTKTGKGTPQWMAPEVLRN-EPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQ-- 723 (783)
Q Consensus 647 L~DFGla~~~~~~~~~~~~~~Gt~~Y~aPE~~~~-~~~s~~sDIwSLG~il~elltG~~Pf~~~~~~~~~~~i~~~~~-- 723 (783)
|+|||++....... ......||+.|+|||++.+ ..++.++|||||||++|+|++|+.||...+.......+.....
T Consensus 175 l~Dfg~~~~~~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~ 253 (362)
T 3pg1_A 175 ICDFNLAREDTADA-NKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNKIVEVVGTP 253 (362)
T ss_dssp ECCTTC----------------CGGGCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCC
T ss_pred EEecCccccccccc-ccceecccceecCcHHhcCCCCCCcHhHHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCC
Confidence 99999997544332 2234578999999999887 6789999999999999999999999998876655544321110
Q ss_pred ----------------------------cccCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhcCc
Q 003963 724 ----------------------------RLEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQASR 772 (783)
Q Consensus 724 ----------------------------~~~~~~~~s~~l~~LI~~cL~~dP~~RPsa~ell~~L~~L~~~~f~~~~ 772 (783)
....+..+++.+.+||.+||..||.+|||+.++ ++|+||+...
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~el------l~hp~f~~~~ 324 (362)
T 3pg1_A 254 KIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQA------LRHPYFESLF 324 (362)
T ss_dssp CHHHHHHTSCHHHHHHTTTCCCCCCCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCHHHH------HTSGGGTTTC
T ss_pred ChHHhhhccchhhhHHHHhhcccCChhhHHhhCCCCCHHHHHHHHHHhcCChhhCCCHHHH------HcCchhhhcc
Confidence 011234568899999999999999999999999 7899998763
No 197
>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A
Probab=100.00 E-value=2.8e-40 Score=365.77 Aligned_cols=255 Identities=24% Similarity=0.364 Sum_probs=213.9
Q ss_pred cccceeEeeeeccCCcEEEEEEEEeC-CceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEeceeecCCce---
Q 003963 503 LWEDLTIGEQIGQGSCGTVYHAVWYG-SQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRL--- 578 (783)
Q Consensus 503 ~~~~y~i~~~LG~G~fG~Vy~a~~~~-~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~--- 578 (783)
..++|.+.+.||+|+||.||+|.+.. ++.||||++............+.+|+.+++.++||||+++++++...+..
T Consensus 40 l~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 119 (371)
T 4exu_A 40 LPKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNF 119 (371)
T ss_dssp EETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSSTTC
T ss_pred ccccEEEEeEEecCCCeEEEEEEECCCCCEEEEEEecccccchhHHHHHHHHHHHHHhcCCCCchhhhhheeccCCcccc
Confidence 34799999999999999999999865 57799999987766677778899999999999999999999999877654
Q ss_pred ---EEEEEecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCcc
Q 003963 579 ---CIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRL 655 (783)
Q Consensus 579 ---~lV~E~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~ 655 (783)
|+||||+. ++|.+++.. .+++..++.++.||+.||+|||+++ |+||||||+||||+.++.+||+|||+++.
T Consensus 120 ~~~~lv~e~~~-~~l~~~~~~---~~~~~~~~~i~~qi~~aL~~LH~~~--ivH~Dikp~NIll~~~~~~kL~Dfg~a~~ 193 (371)
T 4exu_A 120 YDFYLVMPFMQ-TDLQKIMGM---EFSEEKIQYLVYQMLKGLKYIHSAG--VVHRDLKPGNLAVNEDCELKILDFGLARH 193 (371)
T ss_dssp CCCEEEEECCC-EEHHHHTTS---CCCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCCGGGEEECTTCCEEECSTTCC--
T ss_pred eeEEEEEcccc-ccHHHHhhc---CCCHHHHHHHHHHHHHHHHHHHHCC--CcCCCcCHHHeEECCCCCEEEEecCcccc
Confidence 99999996 588888743 4899999999999999999999998 99999999999999999999999999976
Q ss_pred cccccccccCCCCCCcccCcccccC-CCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhcccc-----------
Q 003963 656 KHETYLTTKTGKGTPQWMAPEVLRN-EPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQ----------- 723 (783)
Q Consensus 656 ~~~~~~~~~~~~Gt~~Y~aPE~~~~-~~~s~~sDIwSLG~il~elltG~~Pf~~~~~~~~~~~i~~~~~----------- 723 (783)
.... .....||+.|+|||++.+ ..++.++|||||||++|+|++|+.||...+..+.+..+.....
T Consensus 194 ~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 270 (371)
T 4exu_A 194 ADAE---MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLN 270 (371)
T ss_dssp ---------CTTCCCTTSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHTTCS
T ss_pred cccC---cCCcccCccccCHHHhcCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCcHHHHHHhh
Confidence 5432 234578999999999987 6789999999999999999999999998876655544321110
Q ss_pred ------------------cccCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhcCc
Q 003963 724 ------------------RLEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQASR 772 (783)
Q Consensus 724 ------------------~~~~~~~~s~~l~~LI~~cL~~dP~~RPsa~ell~~L~~L~~~~f~~~~ 772 (783)
....+..+++.+.+||.+||+.||.+|||+.++ |+|+||+..+
T Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~el------l~hp~f~~~~ 331 (371)
T 4exu_A 271 DKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQA------LTHPFFEPFR 331 (371)
T ss_dssp CHHHHHHHHHSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSCTTTSCCHHHH------HTSGGGTTTC
T ss_pred hhhhhhhhhccCCCcchhHHHhccccChHHHHHHHHHCCCChhhcCCHHHH------hcCcccccCC
Confidence 011234578999999999999999999999999 7899997654
No 198
>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*
Probab=100.00 E-value=4.8e-41 Score=367.21 Aligned_cols=259 Identities=22% Similarity=0.388 Sum_probs=219.2
Q ss_pred cccccceeEeeeeccCCcEEEEEEEEeCCceEEEEEEecccCCH---------------HHHHHHHHHHHHHHhCCCCce
Q 003963 501 EILWEDLTIGEQIGQGSCGTVYHAVWYGSQDVAVKVFSRQEYSD---------------EVIHSFRQEVSLMKRLRHPNV 565 (783)
Q Consensus 501 e~~~~~y~i~~~LG~G~fG~Vy~a~~~~~~~vAiK~i~~~~~~~---------------~~~~~~~~Ei~il~~l~HpnI 565 (783)
....++|++.+.||+|+||.||+|.+ .++.||||++....... .....+.+|+.+++.++||||
T Consensus 27 ~~~~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i 105 (348)
T 2pml_X 27 DKYINDYRIIRTLNQGKFNKIILCEK-DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYC 105 (348)
T ss_dssp CEEETTEEEEEEEECCSSCCEEEEEE-TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTB
T ss_pred ccccCceEEEEEEcCCCCeEEEEEEc-CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCc
Confidence 34568999999999999999999998 77899999987543221 112678899999999999999
Q ss_pred eeEeceeecCCceEEEEEecCCCCHHHH------Hhhc-CCcchHHHHHHHHHHHHHHHHHHHh-CCCCEEecCCCCCCE
Q 003963 566 LLFMGAVTSPQRLCIVTEFLPRGSLFRL------LQRN-TTKLDWRRRILMALDIARGVSYLHH-CNPPIIHRDLKSSNL 637 (783)
Q Consensus 566 v~l~~~~~~~~~~~lV~E~~~ggsL~~~------L~~~-~~~l~~~~~~~i~~qi~~aL~~LH~-~~~~IvHrDIKp~NI 637 (783)
+++++++...+.+++||||+++++|.++ +... ...+++..++.++.||+.||.|||+ ++ |+|+||||+||
T Consensus 106 ~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~--i~H~dl~p~Ni 183 (348)
T 2pml_X 106 LTCEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHNEKN--ICHRDVKPSNI 183 (348)
T ss_dssp CCCSEEEESSSEEEEEEECCTTCBSSEESSSEESSCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTSC--EECCCCCGGGE
T ss_pred ceEEEEEeeCCeEEEEEeccCCCcHHHHHHHhhhhhhccccCCCHHHHHHHHHHHHHHHHHHhccCC--EeecCCChHhE
Confidence 9999999999999999999999999998 5442 4568999999999999999999999 88 99999999999
Q ss_pred EEcCCCcEEEEecCCCcccccccccccCCCCCCcccCcccccCC-CCCc-hhHHHHHHHHHHHHHcCCCCCCCCCh-HHH
Q 003963 638 LVDKHWTVKVGDFGLSRLKHETYLTTKTGKGTPQWMAPEVLRNE-PSDE-KSDVYSFGVILWELATEKIPWDNLNS-MQV 714 (783)
Q Consensus 638 Ll~~~~~vkL~DFGla~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~-~~s~-~sDIwSLG~il~elltG~~Pf~~~~~-~~~ 714 (783)
|++.++.+||+|||++...... ......|++.|+|||++.+. .++. ++|||||||++|+|++|..||..... ...
T Consensus 184 l~~~~~~~kl~dfg~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~ 261 (348)
T 2pml_X 184 LMDKNGRVKLSDFGESEYMVDK--KIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISLVEL 261 (348)
T ss_dssp EECTTSCEEECCCTTCEECBTT--EECSSCSCGGGCCGGGGSSCCCEEHHHHHHHHHHHHHHHHHHSSCSSCCSSCSHHH
T ss_pred EEcCCCcEEEeccccccccccc--cccCCCCCcCccCchhhcCCCCCCcchhhHHHHHHHHHHHHhCCCCCCCCCcHHHH
Confidence 9999999999999999765443 33455789999999999887 5655 99999999999999999999987766 555
Q ss_pred HHHhhcccccccCC-------------------CCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhcCc
Q 003963 715 IGAVGFMNQRLEIP-------------------KDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQASR 772 (783)
Q Consensus 715 ~~~i~~~~~~~~~~-------------------~~~s~~l~~LI~~cL~~dP~~RPsa~ell~~L~~L~~~~f~~~~ 772 (783)
...+... ...++ ..+++++.+||.+||..||.+||++.++ ++|+||+...
T Consensus 262 ~~~i~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rps~~e~------l~hp~f~~~~ 330 (348)
T 2pml_X 262 FNNIRTK--NIEYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERITSEDA------LKHEWLADTN 330 (348)
T ss_dssp HHHHTSC--CCCCCCSSSSSTTTTCC--------CCCHHHHHHHHHHCCSSGGGSCCHHHH------HTSGGGTTCC
T ss_pred HHHHhcc--CcCCccchhhhhccccccccccchhhcCHHHHHHHHHHccCChhhCCCHHHH------hcCccccCCC
Confidence 5554322 22333 5689999999999999999999999999 6789997654
No 199
>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*
Probab=100.00 E-value=1.2e-40 Score=354.63 Aligned_cols=261 Identities=28% Similarity=0.436 Sum_probs=220.9
Q ss_pred ccccceeEeeeeccCCcEEEEEEEEe-CCceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEeceeecCCceEE
Q 003963 502 ILWEDLTIGEQIGQGSCGTVYHAVWY-GSQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCI 580 (783)
Q Consensus 502 ~~~~~y~i~~~LG~G~fG~Vy~a~~~-~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~l 580 (783)
...++|++.++||+|+||.||+|.+. .++.||||++............+.+|+.+++.++||||+++++++...+.+++
T Consensus 19 ~~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 98 (287)
T 2wei_A 19 TFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYI 98 (287)
T ss_dssp HHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBSSSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEE
T ss_pred HHhhcceeeEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccchHHHHHHHHHHHHHHhccCCCccEEEEEEeCCCeEEE
Confidence 34579999999999999999999986 45789999997765444445678899999999999999999999999999999
Q ss_pred EEEecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCC---CcEEEEecCCCcccc
Q 003963 581 VTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKH---WTVKVGDFGLSRLKH 657 (783)
Q Consensus 581 V~E~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~---~~vkL~DFGla~~~~ 657 (783)
||||+++++|.+++... ..+++..++.++.||+.||.|||+++ |+|+||||+||||+.+ +.+||+|||++....
T Consensus 99 v~e~~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~LH~~~--i~H~dl~p~NIlv~~~~~~~~~kL~Dfg~~~~~~ 175 (287)
T 2wei_A 99 VGELYTGGELFDEIIKR-KRFSEHDAARIIKQVFSGITYMHKHN--IVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQ 175 (287)
T ss_dssp EECCCCSCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCCGGGEEESCSSTTCCEEECSTTGGGTBC
T ss_pred EEEccCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCC--eeccCCChhhEEEecCCCcccEEEeccCcceeec
Confidence 99999999999988754 35899999999999999999999998 9999999999999754 479999999987654
Q ss_pred cccccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhcccccccC--CCCCCHHH
Q 003963 658 ETYLTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLEI--PKDVDPRW 735 (783)
Q Consensus 658 ~~~~~~~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~--~~~~s~~l 735 (783)
... ......|++.|+|||++.+. ++.++|||||||++|+|++|..||...+.......+......... ...+++++
T Consensus 176 ~~~-~~~~~~~~~~y~aPE~~~~~-~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (287)
T 2wei_A 176 QNT-KMKDRIGTAYYIAPEVLRGT-YDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWRTISDDA 253 (287)
T ss_dssp CCS-SCSCHHHHHTTCCHHHHTTC-CCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCSGGGTTSCHHH
T ss_pred CCC-ccccccCcccccChHHhcCC-CCCchhhHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCCchhhhhcCHHH
Confidence 332 12233478899999998765 889999999999999999999999988877766665433322222 25789999
Q ss_pred HHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhcCcC
Q 003963 736 AAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQASRS 773 (783)
Q Consensus 736 ~~LI~~cL~~dP~~RPsa~ell~~L~~L~~~~f~~~~~ 773 (783)
.+||.+||..||.+|||+.++ +.|+||+...+
T Consensus 254 ~~li~~~l~~dp~~Rps~~el------l~hp~~~~~~~ 285 (287)
T 2wei_A 254 KDLIRKMLTFHPSLRITATQC------LEHPWIQKYSS 285 (287)
T ss_dssp HHHHHHHTCSSGGGSCCHHHH------HHSHHHHHHCC
T ss_pred HHHHHHHcccChhhCcCHHHH------hcCHHHhcccc
Confidence 999999999999999999999 67899986543
No 200
>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}
Probab=100.00 E-value=1.4e-40 Score=361.79 Aligned_cols=264 Identities=30% Similarity=0.463 Sum_probs=202.1
Q ss_pred cccccceeEeeeeccCCcEEEEEEEEeCCceEEEEEEecccCCHHHHHHHHHHHHH--HHhCCCCceeeEeceee-----
Q 003963 501 EILWEDLTIGEQIGQGSCGTVYHAVWYGSQDVAVKVFSRQEYSDEVIHSFRQEVSL--MKRLRHPNVLLFMGAVT----- 573 (783)
Q Consensus 501 e~~~~~y~i~~~LG~G~fG~Vy~a~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~i--l~~l~HpnIv~l~~~~~----- 573 (783)
.+..++|++.++||+|+||.||+|.+ .++.||||++..... ..+..|.++ +..++||||+++++++.
T Consensus 9 ~~~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~-----~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~ 82 (336)
T 3g2f_A 9 SLDLDNLKLLELIGRGRYGAVYKGSL-DERPVAVKVFSFANR-----QNFINEKNIYRVPLMEHDNIARFIVGDERVTAD 82 (336)
T ss_dssp CCCTTSEEEEEEEEECSSEEEEEEEE-TTEEEEEEEEEGGGH-----HHHHHHHHHHTSTTCCCTTBCCEEEEEEEECTT
T ss_pred CcChHHhheeeecccCCCeEEEEEEE-CCeEEEEEEeeccch-----hhHHHHHHHHHHHhccCcchhhheecccccccC
Confidence 45568999999999999999999976 567899999975431 233344444 44589999999997543
Q ss_pred cCCceEEEEEecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhC---------CCCEEecCCCCCCEEEcCCCc
Q 003963 574 SPQRLCIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHC---------NPPIIHRDLKSSNLLVDKHWT 644 (783)
Q Consensus 574 ~~~~~~lV~E~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---------~~~IvHrDIKp~NILl~~~~~ 644 (783)
....+++|||||++|+|.+++.... .++..++.++.||+.||.|||+. + |+||||||+||||+.++.
T Consensus 83 ~~~~~~lv~e~~~~g~L~~~l~~~~--~~~~~~~~i~~qi~~~L~~LH~~~~~~~~~~~~--ivH~Dikp~Nill~~~~~ 158 (336)
T 3g2f_A 83 GRMEYLLVMEYYPNGSLXKYLSLHT--SDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPA--ISHRDLNSRNVLVKNDGT 158 (336)
T ss_dssp SCEEEEEEECCCTTCBHHHHHHHCC--BCHHHHHHHHHHHHHHHHHHHCCBCCGGGCBCC--EECSSCSGGGEEECTTSC
T ss_pred CCceEEEEEecCCCCcHHHHHhhcc--cchhHHHHHHHHHHHHHHHHHhhhccccccccc--eeecccccceEEEcCCCc
Confidence 2335789999999999999997644 58888999999999999999998 7 999999999999999999
Q ss_pred EEEEecCCCccccccc--------ccccCCCCCCcccCcccccC-------CCCCchhHHHHHHHHHHHHHcCCCCCCCC
Q 003963 645 VKVGDFGLSRLKHETY--------LTTKTGKGTPQWMAPEVLRN-------EPSDEKSDVYSFGVILWELATEKIPWDNL 709 (783)
Q Consensus 645 vkL~DFGla~~~~~~~--------~~~~~~~Gt~~Y~aPE~~~~-------~~~s~~sDIwSLG~il~elltG~~Pf~~~ 709 (783)
+||+|||++....... ......+||+.|+|||++.+ ..++.++|||||||++|+|++|..||...
T Consensus 159 ~kL~DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~ 238 (336)
T 3g2f_A 159 CVISDFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPG 238 (336)
T ss_dssp EEECCCTTCEECSSSSCC---------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHHTTBGGGSTT
T ss_pred EEEeeccceeecccccccCccccccccccCCCccceeCchhhcCCcccccccccccccchHHHHHHHHHHHhcCCcCCCc
Confidence 9999999997654321 12224569999999999987 34567899999999999999997765321
Q ss_pred Ch------------------HHHHHHhhcccccccCCCC------CCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHH
Q 003963 710 NS------------------MQVIGAVGFMNQRLEIPKD------VDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQR 765 (783)
Q Consensus 710 ~~------------------~~~~~~i~~~~~~~~~~~~------~s~~l~~LI~~cL~~dP~~RPsa~ell~~L~~L~~ 765 (783)
.. ......+........++.. +++.+.+||.+||..||.+|||+.++++.|+++.+
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~e~l~~L~~ll~ 318 (336)
T 3g2f_A 239 ESVPEYQMAFQTEVGNHPTFEDMQVLVSREKQRPKFPEAWKENSLAVRSLKETIEDCWDQDAEARLTAQXAEERMAELMM 318 (336)
T ss_dssp SCCCCCCCTTHHHHCSSCCHHHHHHHHTTSCCCCCCCTTCCCCSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHH
T ss_pred cchhHHHHhhhcccCCCchHHHHHhhhcccccCCCCCcccccccchHHHHHHHHHHHhcCChhhCcchHHHHHHHHHHHH
Confidence 11 1111112222233344443 34589999999999999999999999999999999
Q ss_pred HHhhcCcCC
Q 003963 766 QYFQASRST 774 (783)
Q Consensus 766 ~~f~~~~~~ 774 (783)
.|-++....
T Consensus 319 ~~~~~~~~~ 327 (336)
T 3g2f_A 319 IWERNKSVS 327 (336)
T ss_dssp CCCC-----
T ss_pred HHHhcccCC
Confidence 988665543
No 201
>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B
Probab=100.00 E-value=2.1e-40 Score=358.51 Aligned_cols=261 Identities=26% Similarity=0.348 Sum_probs=214.7
Q ss_pred ccceeEeeeeccCCcEEEEEEEEe--CCceEEEEEEecccCCHHHHHHHHHHHHHHHhC---CCCceeeEeceee-----
Q 003963 504 WEDLTIGEQIGQGSCGTVYHAVWY--GSQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRL---RHPNVLLFMGAVT----- 573 (783)
Q Consensus 504 ~~~y~i~~~LG~G~fG~Vy~a~~~--~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l---~HpnIv~l~~~~~----- 573 (783)
.++|++.+.||+|+||.||+|.+. .++.||||++............+.+|+.+++.+ +||||+++++++.
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~ 89 (326)
T 1blx_A 10 DQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTD 89 (326)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEECS
T ss_pred hhceeeeeeecccccEEEEEEEecCCCCEEEEEEEeccCcccccCCchhhHHHHHHHhhhccCCCCeEeeeeeeeecccC
Confidence 478999999999999999999984 456799999876543322223455677777666 8999999999987
Q ss_pred cCCceEEEEEecCCCCHHHHHhhcC-CcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCC
Q 003963 574 SPQRLCIVTEFLPRGSLFRLLQRNT-TKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGL 652 (783)
Q Consensus 574 ~~~~~~lV~E~~~ggsL~~~L~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGl 652 (783)
....+++||||+. ++|.+++.... ..+++..++.++.||+.||.|||++| |+|+||||+|||++.++.+||+|||+
T Consensus 90 ~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~g--i~H~dlkp~Nili~~~~~~kl~Dfg~ 166 (326)
T 1blx_A 90 RETKLTLVFEHVD-QDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHR--VVHRDLKPQNILVTSSGQIKLADFGL 166 (326)
T ss_dssp SEEEEEEEEECCS-CBHHHHHHHSCTTCSCHHHHHHHHHHHHHHHHHHHHTT--CCCCCCCGGGEEECTTCCEEECSCCS
T ss_pred CCceEEEEEecCC-CCHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHCC--ceeccCCHHHeEEcCCCCEEEecCcc
Confidence 5567899999997 59999997643 34899999999999999999999998 99999999999999999999999999
Q ss_pred CcccccccccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccc----------
Q 003963 653 SRLKHETYLTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMN---------- 722 (783)
Q Consensus 653 a~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~elltG~~Pf~~~~~~~~~~~i~~~~---------- 722 (783)
+....... ......||+.|+|||++.+..++.++|||||||++|+|++|..||...........+....
T Consensus 167 ~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~ 245 (326)
T 1blx_A 167 ARIYSFQM-ALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPR 245 (326)
T ss_dssp CCCCCGGG-GGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCGGGSCT
T ss_pred cccccCCC-CccccccccceeCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHcCCCCcccCcc
Confidence 97655332 2335678999999999999999999999999999999999999999887766554432110
Q ss_pred ---------------ccccCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhcCcCC
Q 003963 723 ---------------QRLEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQASRST 774 (783)
Q Consensus 723 ---------------~~~~~~~~~s~~l~~LI~~cL~~dP~~RPsa~ell~~L~~L~~~~f~~~~~~ 774 (783)
....++..++..+.+||.+||..||.+||++.++ +.|+||+.....
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~------l~hp~~~~~~~~ 306 (326)
T 1blx_A 246 DVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSA------LSHPYFQDLERC 306 (326)
T ss_dssp TCSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHH------HTSGGGTTCCCC
T ss_pred ccccchhhhcccCcchhhhccccCCHHHHHHHHHHcCCCcccCCCHHHH------hcCccccccchh
Confidence 0112345688999999999999999999999999 679999766543
No 202
>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A
Probab=100.00 E-value=5.7e-40 Score=349.94 Aligned_cols=258 Identities=21% Similarity=0.310 Sum_probs=212.7
Q ss_pred cccceeEeeeeccCCcEEEEEEEEe-CCceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEecee-ecCCceEE
Q 003963 503 LWEDLTIGEQIGQGSCGTVYHAVWY-GSQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAV-TSPQRLCI 580 (783)
Q Consensus 503 ~~~~y~i~~~LG~G~fG~Vy~a~~~-~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~-~~~~~~~l 580 (783)
..++|++.+.||+|+||.||+|.+. .++.||||++....... .+.+|+.+++.++|++++..+.++ ......++
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~----~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~l 82 (296)
T 3uzp_A 7 VGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHP----QLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVM 82 (296)
T ss_dssp ETTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEESCSSCC----HHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEE
T ss_pred eccEEEEEEEEccCCCeEEEEEEEcCCCcEEEEEEecCCcchh----HHHHHHHHHHHhhcCCCCCccccccCCCCceEE
Confidence 3478999999999999999999984 45789999987655432 477899999999988766655554 56677899
Q ss_pred EEEecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEE---cCCCcEEEEecCCCcccc
Q 003963 581 VTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLV---DKHWTVKVGDFGLSRLKH 657 (783)
Q Consensus 581 V~E~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl---~~~~~vkL~DFGla~~~~ 657 (783)
||||+ +++|.+++......+++..++.++.||+.||+|||+++ |+||||||+|||| +.++.+||+|||++....
T Consensus 83 v~e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~--ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~~ 159 (296)
T 3uzp_A 83 VMELL-GPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSKN--FIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYR 159 (296)
T ss_dssp EEECC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTT--EECSCCCGGGEEECCGGGTTCEEECCCTTCEECB
T ss_pred EEEec-CCCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHhCC--eeeCCCCHHHeEEecCCCCCeEEEeeCCCccccc
Confidence 99999 88999999866677999999999999999999999998 9999999999999 488899999999998655
Q ss_pred cccc-------cccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChH---HHHHHhhc---cccc
Q 003963 658 ETYL-------TTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSM---QVIGAVGF---MNQR 724 (783)
Q Consensus 658 ~~~~-------~~~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~elltG~~Pf~~~~~~---~~~~~i~~---~~~~ 724 (783)
.... ......||+.|+|||++.+..++.++|||||||++|+|++|+.||...... ..+..+.. ....
T Consensus 160 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 239 (296)
T 3uzp_A 160 DARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPI 239 (296)
T ss_dssp CTTTCCBCCCCCSCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHHSCH
T ss_pred ccccccccccccccccccccccCChhhhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCcCchhhhhhhhhhcccccCCch
Confidence 4322 123557999999999999999999999999999999999999999764321 12222211 1111
Q ss_pred ccCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHH
Q 003963 725 LEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQY 767 (783)
Q Consensus 725 ~~~~~~~s~~l~~LI~~cL~~dP~~RPsa~ell~~L~~L~~~~ 767 (783)
..++..+++++.+||.+||+.||.+||++.++++.|+++....
T Consensus 240 ~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~~ 282 (296)
T 3uzp_A 240 EVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQ 282 (296)
T ss_dssp HHHTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHHHT
T ss_pred HHHHhhCCHHHHHHHHHHHhcCcCcCCCHHHHHHHHHHHHHhc
Confidence 2234678999999999999999999999999999998886664
No 203
>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A
Probab=100.00 E-value=5.4e-40 Score=349.81 Aligned_cols=257 Identities=21% Similarity=0.308 Sum_probs=208.7
Q ss_pred ccceeEeeeeccCCcEEEEEEEEe-CCceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEecee-ecCCceEEE
Q 003963 504 WEDLTIGEQIGQGSCGTVYHAVWY-GSQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAV-TSPQRLCIV 581 (783)
Q Consensus 504 ~~~y~i~~~LG~G~fG~Vy~a~~~-~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~-~~~~~~~lV 581 (783)
.++|++.+.||+|+||.||+|.+. .++.||||++...... ..+.+|+.+++.++|++++..+.++ ......++|
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~----~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv 83 (296)
T 4hgt_A 8 GNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKH----PQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMV 83 (296)
T ss_dssp ---CEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEC---C----CCHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEE
T ss_pred CCceEEeeeecCCCCeEEEEEEEcCCCceEEEEeecccccc----hHHHHHHHHHHHhcCCCCCCeeeeecCCCCceEEE
Confidence 478999999999999999999984 4567999987654432 3467899999999988777666554 667788999
Q ss_pred EEecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEE---cCCCcEEEEecCCCccccc
Q 003963 582 TEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLV---DKHWTVKVGDFGLSRLKHE 658 (783)
Q Consensus 582 ~E~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl---~~~~~vkL~DFGla~~~~~ 658 (783)
|||+ +++|.+++......+++..++.++.||+.||.|||+++ |+||||||+|||| +.++.+||+|||++.....
T Consensus 84 ~e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~--ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg~a~~~~~ 160 (296)
T 4hgt_A 84 MELL-GPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSKN--FIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRD 160 (296)
T ss_dssp EECC-CCBHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTT--EECSCCSGGGEEECCGGGTTCEEECCCTTCEECBC
T ss_pred EEcc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC--eecCCCCHHHeeeeccCCCCeEEEecCccceeccC
Confidence 9999 88999999876677999999999999999999999999 9999999999999 7889999999999986544
Q ss_pred ccc-------cccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChH---HHHHHhhc---ccccc
Q 003963 659 TYL-------TTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSM---QVIGAVGF---MNQRL 725 (783)
Q Consensus 659 ~~~-------~~~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~elltG~~Pf~~~~~~---~~~~~i~~---~~~~~ 725 (783)
... ......||+.|+|||++.+..++.++|||||||++|+|++|+.||...+.. .....+.. .....
T Consensus 161 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (296)
T 4hgt_A 161 ARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIE 240 (296)
T ss_dssp TTTCCBCCCCCSCCCCSCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHHSCHH
T ss_pred cccCccCCCCcccccCCCccccchHHhcCCCCCchhHHHHHHHHHHHHhcCCCCCcccchhhhhhhhhhhhcccccchhh
Confidence 321 223557899999999999999999999999999999999999999765432 11111111 11112
Q ss_pred cCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHH
Q 003963 726 EIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQY 767 (783)
Q Consensus 726 ~~~~~~s~~l~~LI~~cL~~dP~~RPsa~ell~~L~~L~~~~ 767 (783)
.....+++++.+||..||..||.+||++.++++.|+++....
T Consensus 241 ~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~~~~~~ 282 (296)
T 4hgt_A 241 VLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQ 282 (296)
T ss_dssp HHTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHHHH
T ss_pred hhhccCCHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHh
Confidence 233678999999999999999999999999999999887764
No 204
>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A
Probab=100.00 E-value=1.2e-40 Score=359.09 Aligned_cols=258 Identities=24% Similarity=0.348 Sum_probs=205.0
Q ss_pred ccceeEe-eeeccCCcEEEEEEEEe-CCceEEEEEEecccCCHHHHHHHHHHHHHHHhC-CCCceeeEeceeecCCceEE
Q 003963 504 WEDLTIG-EQIGQGSCGTVYHAVWY-GSQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRL-RHPNVLLFMGAVTSPQRLCI 580 (783)
Q Consensus 504 ~~~y~i~-~~LG~G~fG~Vy~a~~~-~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l-~HpnIv~l~~~~~~~~~~~l 580 (783)
.+.|++. +.||+|+||.||+|.+. .++.||||++...... ....+.+|+.++..+ +||||+++++++...+.+|+
T Consensus 11 ~~~y~i~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~~~~~l 88 (316)
T 2ac3_A 11 EDVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGH--IRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYL 88 (316)
T ss_dssp TTSCEECCCCCCCCSSEEEEEEECSSSCCEEEEEEEECCSSC--CHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEE
T ss_pred ceeEEecCceecCCceEEEEEEEEcCCCcEEEEEEEeeCcch--hHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEE
Confidence 3578885 78999999999999975 4578999999765432 235788899999985 79999999999999999999
Q ss_pred EEEecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCc---EEEEecCCCcccc
Q 003963 581 VTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWT---VKVGDFGLSRLKH 657 (783)
Q Consensus 581 V~E~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~---vkL~DFGla~~~~ 657 (783)
||||+++++|.+++... ..+++..++.++.||+.||+|||+++ |+||||||+|||++.++. +||+|||++....
T Consensus 89 v~e~~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~--ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~~~~~~ 165 (316)
T 2ac3_A 89 VFEKMRGGSILSHIHKR-RHFNELEASVVVQDVASALDFLHNKG--IAHRDLKPENILCEHPNQVSPVKICDFDLGSGIK 165 (316)
T ss_dssp EEECCTTCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHHTT--CCCCCCCGGGEEESCSSSSCSEEECCTTCCC---
T ss_pred EEEcCCCCcHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHhCC--ceeCCCCHHHEEEccCCCcCceEEEEccCccccc
Confidence 99999999999999764 45899999999999999999999998 999999999999988765 9999999987543
Q ss_pred ccc-------ccccCCCCCCcccCcccccC-----CCCCchhHHHHHHHHHHHHHcCCCCCCCCCh--------------
Q 003963 658 ETY-------LTTKTGKGTPQWMAPEVLRN-----EPSDEKSDVYSFGVILWELATEKIPWDNLNS-------------- 711 (783)
Q Consensus 658 ~~~-------~~~~~~~Gt~~Y~aPE~~~~-----~~~s~~sDIwSLG~il~elltG~~Pf~~~~~-------------- 711 (783)
... ......+||+.|+|||++.+ ..++.++|||||||++|+|++|..||.....
T Consensus 166 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~ 245 (316)
T 2ac3_A 166 LNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPAC 245 (316)
T ss_dssp ----------------CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHHSSCSCCCCCCSCSCC----CCHHH
T ss_pred cCCccccccccccccccCCcCccChHHhhcccccccCCCcccccHhHHHHHHHHHHCCCCCcccccccccccccccchhH
Confidence 211 11224468999999999875 4578899999999999999999999976542
Q ss_pred -HHHHHHhhcccccccCC----CCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhcCcCC
Q 003963 712 -MQVIGAVGFMNQRLEIP----KDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQASRST 774 (783)
Q Consensus 712 -~~~~~~i~~~~~~~~~~----~~~s~~l~~LI~~cL~~dP~~RPsa~ell~~L~~L~~~~f~~~~~~ 774 (783)
......+.. ....++ ..+++.+.+||.+||..||.+|||+.++ ++|+||+.....
T Consensus 246 ~~~~~~~i~~--~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~------l~hp~~~~~~~~ 305 (316)
T 2ac3_A 246 QNMLFESIQE--GKYEFPDKDWAHISCAAKDLISKLLVRDAKQRLSAAQV------LQHPWVQGCAPE 305 (316)
T ss_dssp HHHHHHHHHH--CCCCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHH------HHSTTCC-----
T ss_pred HHHHHHHHhc--cCcccCchhcccCCHHHHHHHHHHhhCChhhCCCHHHH------hcChhhcCCCCc
Confidence 122223321 222333 4688999999999999999999999999 789999876543
No 205
>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*
Probab=100.00 E-value=9e-42 Score=369.81 Aligned_cols=261 Identities=30% Similarity=0.475 Sum_probs=209.9
Q ss_pred cccccccceeEeeeeccCCcEEEEEEEEeCCceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEeceeecCCce
Q 003963 499 DYEILWEDLTIGEQIGQGSCGTVYHAVWYGSQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRL 578 (783)
Q Consensus 499 ~~e~~~~~y~i~~~LG~G~fG~Vy~a~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~ 578 (783)
..+...++|++.+.||+|+||.||+|.+..++.||||++....... ....+.+|+.+++.++||||+++++++......
T Consensus 24 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~-~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~ 102 (326)
T 3uim_A 24 ELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTQG-GELQFQTEVEMISMAVHRNLLRLRGFCMTPTER 102 (326)
T ss_dssp HHHTTTTSSCSTTEEECCSSSEEEEECCSSSCCEEEEECCC------CCCHHHHHHHGGGTCCCTTBCCCCEEECCSSCC
T ss_pred HHHHHhhccccceeEecCCCcEEEEEEecCCCEEEEEEeccccCch-HHHHHHHHHHHHHhccCCCccceEEEEecCCce
Confidence 3456678999999999999999999987777889999987654221 123578899999999999999999999999999
Q ss_pred EEEEEecCCCCHHHHHhhcC---CcchHHHHHHHHHHHHHHHHHHHhC---CCCEEecCCCCCCEEEcCCCcEEEEecCC
Q 003963 579 CIVTEFLPRGSLFRLLQRNT---TKLDWRRRILMALDIARGVSYLHHC---NPPIIHRDLKSSNLLVDKHWTVKVGDFGL 652 (783)
Q Consensus 579 ~lV~E~~~ggsL~~~L~~~~---~~l~~~~~~~i~~qi~~aL~~LH~~---~~~IvHrDIKp~NILl~~~~~vkL~DFGl 652 (783)
++||||+++++|.+++.... ..+++..++.++.||+.||.|||++ + |+||||||+|||++.++.+||+|||+
T Consensus 103 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~--ivH~Dlkp~Nil~~~~~~~kl~Dfg~ 180 (326)
T 3uim_A 103 LLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPK--IIHRDVKAANILLDEEFEAVVGDFGL 180 (326)
T ss_dssp EEEEECCTTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHHHSSSSC--EECCCCSGGGEEECTTCCEEECCCSS
T ss_pred EEEEEeccCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCC--eEeCCCchhhEEECCCCCEEeccCcc
Confidence 99999999999999997543 3489999999999999999999998 8 99999999999999999999999999
Q ss_pred Cccccccc-ccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCC-----ChHHHHHHhhccccc--
Q 003963 653 SRLKHETY-LTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNL-----NSMQVIGAVGFMNQR-- 724 (783)
Q Consensus 653 a~~~~~~~-~~~~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~elltG~~Pf~~~-----~~~~~~~~i~~~~~~-- 724 (783)
+....... .......||+.|+|||++.+..++.++|||||||++|+|++|..||... ........+......
T Consensus 181 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (326)
T 3uim_A 181 AKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKK 260 (326)
T ss_dssp CEECCSSSSCEECCCCSCGGGCCHHHHHHSEECHHHHHHHHHHHHHHHHHCCCSBCHHHHTTTSCSBHHHHHTTTTSSCC
T ss_pred ccccCcccccccccccCCcCccCHHHhccCCCCccccchhHHHHHHHHHhCCCcccccccccccchhHHHHHHHHhhchh
Confidence 98654332 2233456999999999999888999999999999999999999999521 111111111100000
Q ss_pred ----------ccCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHH
Q 003963 725 ----------LEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRD 762 (783)
Q Consensus 725 ----------~~~~~~~s~~l~~LI~~cL~~dP~~RPsa~ell~~L~~ 762 (783)
...+...+..+.+||.+||+.||.+|||+.+++++|+.
T Consensus 261 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~ 308 (326)
T 3uim_A 261 LEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEG 308 (326)
T ss_dssp STTSSCTTCTTSCCHHHHHHHHHHHHHHTCSCGGGSCCHHHHHHHHHT
T ss_pred hhhhcChhhccccCHHHHHHHHHHHHHHhCcCCccCCCHHHHHHHhcC
Confidence 11112234679999999999999999999999999863
No 206
>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A
Probab=100.00 E-value=1e-41 Score=378.03 Aligned_cols=250 Identities=15% Similarity=0.177 Sum_probs=199.9
Q ss_pred ccceeEeeeeccCCcEEEEEEEEeC-CceEEEEEEecccC-CHHHHHHHHHHHH---HHHhCCCCceeeEe-------ce
Q 003963 504 WEDLTIGEQIGQGSCGTVYHAVWYG-SQDVAVKVFSRQEY-SDEVIHSFRQEVS---LMKRLRHPNVLLFM-------GA 571 (783)
Q Consensus 504 ~~~y~i~~~LG~G~fG~Vy~a~~~~-~~~vAiK~i~~~~~-~~~~~~~~~~Ei~---il~~l~HpnIv~l~-------~~ 571 (783)
.++|++.++||+|+||.||+|.+.. ++.||||++..... .....+.+.+|+. +++.++|||||+++ ++
T Consensus 72 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~~ 151 (377)
T 3byv_A 72 PRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDL 151 (377)
T ss_dssp CEEEEEEEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSEE
T ss_pred CceEEEcceeecCCCEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhhh
Confidence 4789999999999999999999754 67899999986532 3345678889994 55555799999998 55
Q ss_pred eecCC-----------------ceEEEEEecCCCCHHHHHhhcC------CcchHHHHHHHHHHHHHHHHHHHhCCCCEE
Q 003963 572 VTSPQ-----------------RLCIVTEFLPRGSLFRLLQRNT------TKLDWRRRILMALDIARGVSYLHHCNPPII 628 (783)
Q Consensus 572 ~~~~~-----------------~~~lV~E~~~ggsL~~~L~~~~------~~l~~~~~~~i~~qi~~aL~~LH~~~~~Iv 628 (783)
+...+ ..|+||||+ +|+|.+++.... ..+++..++.++.||+.||+|||+++ |+
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~--iv 228 (377)
T 3byv_A 152 VKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYG--LV 228 (377)
T ss_dssp EECTTSCSEEEC------CEEESEEEEEECC-SEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHHHTT--EE
T ss_pred hhccCCccccccccCCCceEEEEEEEEEecc-CCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHHhCC--ee
Confidence 54443 378999999 679999997532 23446888889999999999999998 99
Q ss_pred ecCCCCCCEEEcCCCcEEEEecCCCcccccccccccCCCCCCcccCcccccCC-----------CCCchhHHHHHHHHHH
Q 003963 629 HRDLKSSNLLVDKHWTVKVGDFGLSRLKHETYLTTKTGKGTPQWMAPEVLRNE-----------PSDEKSDVYSFGVILW 697 (783)
Q Consensus 629 HrDIKp~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~-----------~~s~~sDIwSLG~il~ 697 (783)
||||||+||||+.++.+||+|||+++.... .....+| +.|+|||++.+. .++.++|||||||+||
T Consensus 229 HrDikp~NIll~~~~~~kL~DFG~a~~~~~---~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DvwSlG~il~ 304 (377)
T 3byv_A 229 HTYLRPVDIVLDQRGGVFLTGFEHLVRDGA---RVVSSVS-RGFEPPELEARRATISYHRDRRTLMTFSFDAWALGLVIY 304 (377)
T ss_dssp CSCCCGGGEEECTTCCEEECCGGGCEETTC---EEECCCC-TTCCCHHHHHHHTSTHHHHCCEEECCHHHHHHHHHHHHH
T ss_pred cCCCCHHHEEEcCCCCEEEEechhheecCC---cccCCCC-cCccChhhhcccccccccccccccCChhhhHHHHHHHHH
Confidence 999999999999999999999999985433 2335567 999999999887 8999999999999999
Q ss_pred HHHcCCCCCCCCChHHHHHHhhcccccccCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhcCc
Q 003963 698 ELATEKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQASR 772 (783)
Q Consensus 698 elltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~l~~LI~~cL~~dP~~RPsa~ell~~L~~L~~~~f~~~~ 772 (783)
+|++|+.||......... ......+..+++++.+||.+||..||.+||++.++ ++|+||+..+
T Consensus 305 elltg~~Pf~~~~~~~~~------~~~~~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~------l~hp~f~~~~ 367 (377)
T 3byv_A 305 WIWCADLPITKDAALGGS------EWIFRSCKNIPQPVRALLEGFLRYPKEDRLLPLQA------METPEYEQLR 367 (377)
T ss_dssp HHHHSSCCC------CCS------GGGGSSCCCCCHHHHHHHHHHTCSSGGGCCCHHHH------HTSHHHHHHH
T ss_pred HHHHCCCCCcccccccch------hhhhhhccCCCHHHHHHHHHHcCCCchhCCCHHHH------hhChHHHHHH
Confidence 999999999765433221 12223446789999999999999999999999999 5677876543
No 207
>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}
Probab=100.00 E-value=2.6e-40 Score=356.45 Aligned_cols=258 Identities=19% Similarity=0.258 Sum_probs=209.3
Q ss_pred cccceeEeeeeccCCcEEEEEEEEeC-CceEEEEEEecccC-CHHHHHHHHHHHHHHHhCCCCceeeEeceeecCCceEE
Q 003963 503 LWEDLTIGEQIGQGSCGTVYHAVWYG-SQDVAVKVFSRQEY-SDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCI 580 (783)
Q Consensus 503 ~~~~y~i~~~LG~G~fG~Vy~a~~~~-~~~vAiK~i~~~~~-~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~l 580 (783)
..++|++.+.||+|+||.||+|.+.. ++.||||++..... .......+.+|+.+++.++||||+++++++...+.+|+
T Consensus 32 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~l 111 (309)
T 2h34_A 32 QFGPYRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFGEIDGQLYV 111 (309)
T ss_dssp --CCEEEEEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEE
T ss_pred EeccEEEEEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEeeCCeEEE
Confidence 45799999999999999999999864 56799999876543 34556788999999999999999999999999999999
Q ss_pred EEEecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCccccccc
Q 003963 581 VTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETY 660 (783)
Q Consensus 581 V~E~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~ 660 (783)
||||+++++|.+++... ..+++..++.++.||+.||.|||+++ |+|+||||+|||++.++.+||+|||++.......
T Consensus 112 v~e~~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~--i~H~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~ 188 (309)
T 2h34_A 112 DMRLINGVDLAAMLRRQ-GPLAPPRAVAIVRQIGSALDAAHAAG--ATHRDVKPENILVSADDFAYLVDFGIASATTDEK 188 (309)
T ss_dssp EEECCCCEEHHHHHHHH-CSCCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCCGGGEEECTTSCEEECSCCC--------
T ss_pred EEEecCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCc--CCcCCCChHHEEEcCCCCEEEecCccCccccccc
Confidence 99999999999999764 45899999999999999999999998 9999999999999999999999999987654432
Q ss_pred -ccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccc-ccccCCCCCCHHHHHH
Q 003963 661 -LTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMN-QRLEIPKDVDPRWAAI 738 (783)
Q Consensus 661 -~~~~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~elltG~~Pf~~~~~~~~~~~i~~~~-~~~~~~~~~s~~l~~L 738 (783)
.......|++.|+|||++.+..++.++|||||||++|+|++|..||...........+.... .....+..+++.+.+|
T Consensus 189 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 268 (309)
T 2h34_A 189 LTQLGNTVGTLYYMAPERFSESHATYRADIYALTCVLYECLTGSPPYQGDQLSVMGAHINQAIPRPSTVRPGIPVAFDAV 268 (309)
T ss_dssp --------CCGGGCCGGGTCC----CCCHHHHHHHHHHHHHHSSCSSCSCHHHHHHHHHHSCCCCGGGTSTTCCTHHHHH
T ss_pred cccccccCCCcCccCHHHHcCCCCCchHhHHHHHHHHHHHHHCCCCCCCchHHHHHHHhccCCCCccccCCCCCHHHHHH
Confidence 12234568999999999999999999999999999999999999998876554433332222 2234567899999999
Q ss_pred HHHhhhhCCCCCC-CHHHHHHHHHHH
Q 003963 739 VESCWHSDPQCRP-SFQELVDKLRDL 763 (783)
Q Consensus 739 I~~cL~~dP~~RP-sa~ell~~L~~L 763 (783)
|.+||..||.+|| ++.++++.|+.+
T Consensus 269 i~~~l~~dP~~Rp~s~~~l~~~l~~~ 294 (309)
T 2h34_A 269 IARGMAKNPEDRYVTCGDLSAAAHAA 294 (309)
T ss_dssp HHHHTCSSGGGSCSSHHHHHHHHHHT
T ss_pred HHHhccCCHHHHHHhHHHHHHHHHHH
Confidence 9999999999999 999998887654
No 208
>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...
Probab=100.00 E-value=3.8e-40 Score=363.53 Aligned_cols=256 Identities=24% Similarity=0.363 Sum_probs=213.3
Q ss_pred ccceeEeeeeccCCcEEEEEEEEeC-CceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEeceeecC-----Cc
Q 003963 504 WEDLTIGEQIGQGSCGTVYHAVWYG-SQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSP-----QR 577 (783)
Q Consensus 504 ~~~y~i~~~LG~G~fG~Vy~a~~~~-~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~-----~~ 577 (783)
.++|++.++||+|+||.||+|.+.. ++.||||++.... .......+.+|+.+++.++||||+++++++... ..
T Consensus 26 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 104 (364)
T 3qyz_A 26 GPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFE-HQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKD 104 (364)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCTT-CHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCC
T ss_pred cccEEEEEEeecCCCeEEEEEEECCCCeEEEEEEecccc-CcHHHHHHHHHHHHHHhcCCCCCccceeEEecCCccccce
Confidence 3689999999999999999999864 4679999987533 445567889999999999999999999998654 46
Q ss_pred eEEEEEecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCcccc
Q 003963 578 LCIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKH 657 (783)
Q Consensus 578 ~~lV~E~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~ 657 (783)
+|+||||+. ++|.+++... .+++..++.++.||+.||+|||+++ |+||||||+||||+.++.+||+|||++....
T Consensus 105 ~~iv~e~~~-~~L~~~l~~~--~~~~~~~~~i~~qi~~aL~~LH~~~--ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~ 179 (364)
T 3qyz_A 105 VYIVQDLME-TDLYKLLKTQ--HLSNDHICYFLYQILRGLKYIHSAN--VLHRDLKPSNLLLNTTCDLKICDFGLARVAD 179 (364)
T ss_dssp EEEEEECCS-EEHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHHHTT--EECCCCCGGGEEECTTCCEEECCCTTCEECC
T ss_pred EEEEEcccC-cCHHHHHHhC--CCCHHHHHHHHHHHHHHHHHHHHCC--eecCCCChHhEEECCCCCEEEEeCcceEecC
Confidence 899999996 5999999754 4899999999999999999999998 9999999999999999999999999998655
Q ss_pred ccccc---ccCCCCCCcccCcccccC-CCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccccc---------
Q 003963 658 ETYLT---TKTGKGTPQWMAPEVLRN-EPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQR--------- 724 (783)
Q Consensus 658 ~~~~~---~~~~~Gt~~Y~aPE~~~~-~~~s~~sDIwSLG~il~elltG~~Pf~~~~~~~~~~~i~~~~~~--------- 724 (783)
..... ....+||+.|+|||++.+ ..++.++|||||||++|+|++|++||...+....+..+......
T Consensus 180 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~ 259 (364)
T 3qyz_A 180 PDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCI 259 (364)
T ss_dssp GGGCBCCTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHHHHHHHHHSSCSSCCSSGGGHHHHHHHHHCSCCHHHHHTC
T ss_pred CCCCccccccccccccCCCCCHHhcCCCCCCcchhHHHHHHHHHHHHHCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHh
Confidence 43221 234579999999998754 55899999999999999999999999887765544443211000
Q ss_pred --------------------ccCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhcC
Q 003963 725 --------------------LEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQAS 771 (783)
Q Consensus 725 --------------------~~~~~~~s~~l~~LI~~cL~~dP~~RPsa~ell~~L~~L~~~~f~~~ 771 (783)
..+...+++++.+||.+||..||.+|||+.++ |+|+||+..
T Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~------l~hp~~~~~ 320 (364)
T 3qyz_A 260 INLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQA------LAHPYLEQY 320 (364)
T ss_dssp CCHHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHTCSSTTTSCCHHHH------HTSGGGTTT
T ss_pred hhhhHHHHHHhcCCccCCCHHHhCCCCCHHHHHHHHHHcCCChhhCCCHHHH------hcCcchhhc
Confidence 11224678999999999999999999999999 689999765
No 209
>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}
Probab=100.00 E-value=1.3e-41 Score=366.77 Aligned_cols=266 Identities=31% Similarity=0.557 Sum_probs=219.4
Q ss_pred cccccccccceeEeeeeccCCcEEEEEEEEeCCceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEeceeecCC
Q 003963 497 CLDYEILWEDLTIGEQIGQGSCGTVYHAVWYGSQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQ 576 (783)
Q Consensus 497 ~~~~e~~~~~y~i~~~LG~G~fG~Vy~a~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~ 576 (783)
...+++..++|++.+.||+|+||.||+|.+.. .||+|++..........+.+.+|+.+++.++||||+++++++....
T Consensus 25 ~~~~~i~~~~~~~~~~lg~G~~g~V~~~~~~~--~~avk~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~ 102 (319)
T 2y4i_B 25 LQEWDIPFEQLEIGELIGKGRFGQVYHGRWHG--EVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSPP 102 (319)
T ss_dssp GGGSSSCCSCEECCCBCCCSSSSEEEEEEESS--SEEEEECCCCSCCCCCCCCCCTTGGGGTTCCCTTBCCCCEEEECSS
T ss_pred cccccCCHHHeEEeeEeccCCceEEEEEEEcC--eEEEEEeecCCCCHHHHHHHHHHHHHHhcCCCCCEeEEEEEEecCC
Confidence 35667788999999999999999999998754 6999998765443333455778999999999999999999999999
Q ss_pred ceEEEEEecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCccc
Q 003963 577 RLCIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLK 656 (783)
Q Consensus 577 ~~~lV~E~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~ 656 (783)
.+++||||+++++|.+++......+++..++.++.||+.||+|||+++ |+||||||+|||++ ++.+||+|||++...
T Consensus 103 ~~~iv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~--i~H~dlkp~NIl~~-~~~~~l~Dfg~~~~~ 179 (319)
T 2y4i_B 103 HLAIITSLCKGRTLYSVVRDAKIVLDVNKTRQIAQEIVKGMGYLHAKG--ILHKDLKSKNVFYD-NGKVVITDFGLFSIS 179 (319)
T ss_dssp CEEEECBCCCSEEHHHHTTSSCCCCCSHHHHHHHHHHHHHHHHHHHTT--CCCCCCCSTTEEEC---CCEECCCSCCC--
T ss_pred ceEEEeecccCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCC--ccccCCChhhEEEe-CCCEEEeecCCcccc
Confidence 999999999999999999876667999999999999999999999998 99999999999998 679999999998754
Q ss_pred ccc-----cccccCCCCCCcccCcccccC---------CCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccc
Q 003963 657 HET-----YLTTKTGKGTPQWMAPEVLRN---------EPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMN 722 (783)
Q Consensus 657 ~~~-----~~~~~~~~Gt~~Y~aPE~~~~---------~~~s~~sDIwSLG~il~elltG~~Pf~~~~~~~~~~~i~~~~ 722 (783)
... ........|++.|+|||++.+ ..++.++|||||||++|+|++|..||...........+....
T Consensus 180 ~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~ 259 (319)
T 2y4i_B 180 GVLQAGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPAEAIIWQMGTGM 259 (319)
T ss_dssp --------CCSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHHSSCSSSSCCHHHHHHHHHTTC
T ss_pred ccccccccccccccCCCcccccChHHhhhccccccccccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhccCC
Confidence 321 112223458999999999875 447889999999999999999999999888877766654433
Q ss_pred ccccCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHH
Q 003963 723 QRLEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQY 767 (783)
Q Consensus 723 ~~~~~~~~~s~~l~~LI~~cL~~dP~~RPsa~ell~~L~~L~~~~ 767 (783)
.....+..++.++.+||.+||..||.+|||+.++++.|+++....
T Consensus 260 ~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~l~~~~ 304 (319)
T 2y4i_B 260 KPNLSQIGMGKEISDILLFCWAFEQEERPTFTKLMDMLEKLPKRN 304 (319)
T ss_dssp CCCCCCSSCCTTHHHHHHHHHCSSTTTSCCHHHHHHHHTTC----
T ss_pred CCCCCcCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHhh
Confidence 333334468899999999999999999999999999999887654
No 210
>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*
Probab=100.00 E-value=2.5e-41 Score=374.00 Aligned_cols=257 Identities=12% Similarity=0.080 Sum_probs=193.6
Q ss_pred ccceeEeeeeccCCcEEEEEEEEe-CCceEEEEEEecccCC-HHHHHHHHHHHHHHHhC--CCCceeeEec-------ee
Q 003963 504 WEDLTIGEQIGQGSCGTVYHAVWY-GSQDVAVKVFSRQEYS-DEVIHSFRQEVSLMKRL--RHPNVLLFMG-------AV 572 (783)
Q Consensus 504 ~~~y~i~~~LG~G~fG~Vy~a~~~-~~~~vAiK~i~~~~~~-~~~~~~~~~Ei~il~~l--~HpnIv~l~~-------~~ 572 (783)
..+|++.++||+|+||.||+|.+. .++.||||++...... ......+.+|+.+++.| +||||++++. ++
T Consensus 61 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~hp~iv~~~~~~~~p~d~~ 140 (371)
T 3q60_A 61 ERKLKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLGESPEEARDRRRLLLPSDAV 140 (371)
T ss_dssp EEEEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC----------CBCCCCEEE
T ss_pred ceeeeeeeeccCCCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcccChhhhhhceeEEeeehhe
Confidence 346999999999999999999986 4578999999887653 34556777885555555 6999888653 33
Q ss_pred ecC-----------------CceEEEEEecCCCCHHHHHhhcCCcchHHHH------HHHHHHHHHHHHHHHhCCCCEEe
Q 003963 573 TSP-----------------QRLCIVTEFLPRGSLFRLLQRNTTKLDWRRR------ILMALDIARGVSYLHHCNPPIIH 629 (783)
Q Consensus 573 ~~~-----------------~~~~lV~E~~~ggsL~~~L~~~~~~l~~~~~------~~i~~qi~~aL~~LH~~~~~IvH 629 (783)
... ..+|+|||||+ ++|.+++......+....+ +.++.||+.||+|||+++ |+|
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~vk~~i~~qi~~aL~~LH~~~--ivH 217 (371)
T 3q60_A 141 AVQSQPPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTLDFVYVFRGDEGILALHILTAQLIRLAANLQSKG--LVH 217 (371)
T ss_dssp EETTSCSSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHHHHSCCCCHHHHHHHHHHHHHHHHHHHHHHHHTT--EEE
T ss_pred ecCCCCCeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHhccccchhhhhhhhhHHHHHHHHHHHHHHHHHCC--Ccc
Confidence 322 23799999998 7999999865444555555 677799999999999999 999
Q ss_pred cCCCCCCEEEcCCCcEEEEecCCCcccccccccccCCCCCCcccCcccccC--CCCCchhHHHHHHHHHHHHHcCCCCCC
Q 003963 630 RDLKSSNLLVDKHWTVKVGDFGLSRLKHETYLTTKTGKGTPQWMAPEVLRN--EPSDEKSDVYSFGVILWELATEKIPWD 707 (783)
Q Consensus 630 rDIKp~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~~Gt~~Y~aPE~~~~--~~~s~~sDIwSLG~il~elltG~~Pf~ 707 (783)
|||||+||||+.++.+||+|||+++....... ...+|+.|+|||++.+ ..++.++|||||||+||+|++|+.||.
T Consensus 218 rDikp~NIll~~~~~~kL~DFG~a~~~~~~~~---~~~~t~~y~aPE~~~~~~~~~~~~~DiwSlG~il~elltg~~Pf~ 294 (371)
T 3q60_A 218 GHFTPDNLFIMPDGRLMLGDVSALWKVGTRGP---ASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWCLFLPFG 294 (371)
T ss_dssp TTCSGGGEEECTTSCEEECCGGGEEETTCEEE---GGGSCGGGCCHHHHTCSEEECCHHHHHHHHHHHHHHHHHSSCSTT
T ss_pred CcCCHHHEEECCCCCEEEEecceeeecCCCcc---CccCCcCCcChhhccCCCCCcCccccHHHHHHHHHHHHhCCCCCC
Confidence 99999999999999999999999986543321 3356799999999987 678999999999999999999999997
Q ss_pred CCChHHHH--HH---hhcc--cccccCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhcCc
Q 003963 708 NLNSMQVI--GA---VGFM--NQRLEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQASR 772 (783)
Q Consensus 708 ~~~~~~~~--~~---i~~~--~~~~~~~~~~s~~l~~LI~~cL~~dP~~RPsa~ell~~L~~L~~~~f~~~~ 772 (783)
........ .. .... ......+..+++.+.+||.+||..||.+|||+.++ |+|+||+...
T Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~------l~hp~f~~~~ 360 (371)
T 3q60_A 295 LVTPGIKGSWKRPSLRVPGTDSLAFGSCTPLPDFVKTLIGRFLNFDRRRRLLPLEA------METPEFLQLQ 360 (371)
T ss_dssp BCCTTCTTCCCBCCTTSCCCCSCCCTTSSCCCHHHHHHHHHHTCSSTTTCCCHHHH------TTSHHHHHHH
T ss_pred CcCcccccchhhhhhhhccccccchhhccCCCHHHHHHHHHHcCCChhhCCCHHHH------hcCHHHHHHH
Confidence 66432110 00 0001 11222335789999999999999999999999999 6788887543
No 211
>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}
Probab=100.00 E-value=3.6e-40 Score=357.81 Aligned_cols=262 Identities=30% Similarity=0.496 Sum_probs=218.2
Q ss_pred ccccceeEeeeeccCCcEEEEEEEE-----eCCceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEeceeecCC
Q 003963 502 ILWEDLTIGEQIGQGSCGTVYHAVW-----YGSQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQ 576 (783)
Q Consensus 502 ~~~~~y~i~~~LG~G~fG~Vy~a~~-----~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~ 576 (783)
...++|+++++||+|+||.||++.+ ..++.||||++... .....+.+.+|+.+++.++||||+++++++...+
T Consensus 38 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~ 115 (326)
T 2w1i_A 38 FEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS--TEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAG 115 (326)
T ss_dssp CCGGGEEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSC--CSHHHHHHHHHHHHHHTCCCTTBCCEEEEECC--
T ss_pred cCHHHceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccC--CHHHHHHHHHHHHHHHhCCCCCeeeEEEEEEecC
Confidence 3457899999999999999999984 24567999998764 3345678899999999999999999999887654
Q ss_pred --ceEEEEEecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCc
Q 003963 577 --RLCIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSR 654 (783)
Q Consensus 577 --~~~lV~E~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~ 654 (783)
.+++||||+++++|.+++......+++..++.++.||+.||.|||+++ |+||||||+||||+.++.+||+|||++.
T Consensus 116 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~--ivH~dikp~NIli~~~~~~kL~Dfg~~~ 193 (326)
T 2w1i_A 116 RRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKR--YIHRDLATRNILVENENRVKIGDFGLTK 193 (326)
T ss_dssp --CCEEEECCCTTCBHHHHHHHSTTSSCHHHHHHHHHHHHHHHHHHHHTT--EECSCCCGGGEEEEETTEEEECCCTTCE
T ss_pred CCceEEEEECCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCC--EeccCCCcceEEEcCCCcEEEecCcchh
Confidence 789999999999999999887677999999999999999999999998 9999999999999999999999999998
Q ss_pred ccccccc---cccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChH------------H---HHH
Q 003963 655 LKHETYL---TTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSM------------Q---VIG 716 (783)
Q Consensus 655 ~~~~~~~---~~~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~elltG~~Pf~~~~~~------------~---~~~ 716 (783)
....... ......++..|+|||++.+..++.++|||||||++|+|++|..||...... . .+.
T Consensus 194 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (326)
T 2w1i_A 194 VLPQDKEYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLI 273 (326)
T ss_dssp ECCSSCSEEECSSCCSCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHHTTCGGGSHHHHHHHHHCTTCCTHHHHHHHH
T ss_pred hccccccccccccCCCCceeEECchhhcCCCCCchhhHHHHHHHHHHHHhcCCCCCCCHHHHHHhhccccchhhhHHHHH
Confidence 6544321 122345778899999999988999999999999999999999998642110 0 000
Q ss_pred HhhcccccccCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHH
Q 003963 717 AVGFMNQRLEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQY 767 (783)
Q Consensus 717 ~i~~~~~~~~~~~~~s~~l~~LI~~cL~~dP~~RPsa~ell~~L~~L~~~~ 767 (783)
...........+..+++++.+||.+||..||.+||++.++++.|+.++..+
T Consensus 274 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~el~~~L~~l~~~l 324 (326)
T 2w1i_A 274 ELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDQM 324 (326)
T ss_dssp HHHHTTCCCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred HHhhcCCCCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHHh
Confidence 111122345567889999999999999999999999999999999998775
No 212
>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*
Probab=100.00 E-value=2.8e-40 Score=358.25 Aligned_cols=258 Identities=24% Similarity=0.352 Sum_probs=215.0
Q ss_pred cccccceeEeeeeccCCcEEEEEEEEe--CCceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCC------ceeeEecee
Q 003963 501 EILWEDLTIGEQIGQGSCGTVYHAVWY--GSQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHP------NVLLFMGAV 572 (783)
Q Consensus 501 e~~~~~y~i~~~LG~G~fG~Vy~a~~~--~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~Hp------nIv~l~~~~ 572 (783)
+...++|++.+.||+|+||.||+|.+. .++.||||++... ......+.+|+.+++.++|+ +|+++++++
T Consensus 10 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~---~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~ 86 (339)
T 1z57_A 10 DVLSARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNV---DRYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWF 86 (339)
T ss_dssp CEETTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSS---HHHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEE
T ss_pred CCccCceEEEEEEecCCCeEEEEEEecCCCCcEEEEEEEecC---CchhHHHHHHHHHHHHhhhcCCCCceeeEeeeccc
Confidence 455689999999999999999999973 4577999998643 34556788999999988655 599999999
Q ss_pred ecCCceEEEEEecCCCCHHHHHhhcC-CcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcC----------
Q 003963 573 TSPQRLCIVTEFLPRGSLFRLLQRNT-TKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDK---------- 641 (783)
Q Consensus 573 ~~~~~~~lV~E~~~ggsL~~~L~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~---------- 641 (783)
...+.+|+||||+ +++|.+++.... .++++..++.++.||+.||+|||+++ |+||||||+||||+.
T Consensus 87 ~~~~~~~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~--ivH~Dlkp~Nil~~~~~~~~~~~~~ 163 (339)
T 1z57_A 87 EHHGHICIVFELL-GLSTYDFIKENGFLPFRLDHIRKMAYQICKSVNFLHSNK--LTHTDLKPENILFVQSDYTEAYNPK 163 (339)
T ss_dssp EETTEEEEEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTT--EECCCCCGGGEEESCCCEEEEEC--
T ss_pred ccCCcEEEEEcCC-CCCHHHHHHhcCCCCCcHHHHHHHHHHHHHHHHHHHHCC--CcCCCCCHHHEEEeccccccccCCc
Confidence 9999999999999 889999997644 36889999999999999999999998 999999999999987
Q ss_pred ---------CCcEEEEecCCCcccccccccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChH
Q 003963 642 ---------HWTVKVGDFGLSRLKHETYLTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSM 712 (783)
Q Consensus 642 ---------~~~vkL~DFGla~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~elltG~~Pf~~~~~~ 712 (783)
++.+||+|||++...... .....||+.|+|||++.+..++.++|||||||++|+|++|..||...+..
T Consensus 164 ~~~~~~~~~~~~~kl~Dfg~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~ 240 (339)
T 1z57_A 164 IKRDERTLINPDIKVVDFGSATYDDEH---HSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSK 240 (339)
T ss_dssp --CEEEEESCCCEEECCCSSCEETTSC---CCSSCSCGGGCCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSCHH
T ss_pred cccccccccCCCceEeeCcccccCccc---cccccCCccccChHHhhCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChH
Confidence 668999999999764432 23557899999999999999999999999999999999999999887766
Q ss_pred HHHHHhhccccc------------------------------------------ccCCCCCCHHHHHHHHHhhhhCCCCC
Q 003963 713 QVIGAVGFMNQR------------------------------------------LEIPKDVDPRWAAIVESCWHSDPQCR 750 (783)
Q Consensus 713 ~~~~~i~~~~~~------------------------------------------~~~~~~~s~~l~~LI~~cL~~dP~~R 750 (783)
.....+...... ...+...++++.+||.+||..||.+|
T Consensus 241 ~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R 320 (339)
T 1z57_A 241 EHLAMMERILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDLIQKMLEYDPAKR 320 (339)
T ss_dssp HHHHHHHHHHCSCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTS
T ss_pred HHHHHHHHHhCCCCHHHHhhccchhHHhhccccccccccccchhhhcCcchhhhcccchhhHHHHHHHHHHHhCcCcccc
Confidence 544333211110 01112235779999999999999999
Q ss_pred CCHHHHHHHHHHHHHHHhhcCcC
Q 003963 751 PSFQELVDKLRDLQRQYFQASRS 773 (783)
Q Consensus 751 Psa~ell~~L~~L~~~~f~~~~~ 773 (783)
||+.++ ++|+||+..+.
T Consensus 321 pt~~el------l~hp~f~~~~~ 337 (339)
T 1z57_A 321 ITLREA------LKHPFFDLLKK 337 (339)
T ss_dssp CCHHHH------TTSGGGGGGGC
T ss_pred cCHHHH------hcCHHHHHHhc
Confidence 999999 78999998765
No 213
>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*
Probab=100.00 E-value=3.3e-41 Score=360.39 Aligned_cols=267 Identities=29% Similarity=0.496 Sum_probs=197.3
Q ss_pred ccccccccceeEeeeeccCCcEEEEEEEEe-CCceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEeceeecCC
Q 003963 498 LDYEILWEDLTIGEQIGQGSCGTVYHAVWY-GSQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQ 576 (783)
Q Consensus 498 ~~~e~~~~~y~i~~~LG~G~fG~Vy~a~~~-~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~ 576 (783)
..+.+..++|++.+.||+|+||.||+|.+. .++.||||++..... ......+.+|+.+++.++||||+++++++...+
T Consensus 8 ~p~~i~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~ 86 (303)
T 2vwi_A 8 LPWSINRDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKC-QTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKD 86 (303)
T ss_dssp -----CCCCCEEEEECC---CCCEEEEEC----CEEEEECCC-----------------CCCCCCCTTBCCEEEEEESSS
T ss_pred cccccchhhhhhhheeccccceEEEEEEECCCCcEEEEEEEEhhhc-chhHHHHHHHHHHHhhcCCCCEeeEEEEEeecC
Confidence 345667789999999999999999999875 457899999865432 233467888999999999999999999999999
Q ss_pred ceEEEEEecCCCCHHHHHhh-------cCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEe
Q 003963 577 RLCIVTEFLPRGSLFRLLQR-------NTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGD 649 (783)
Q Consensus 577 ~~~lV~E~~~ggsL~~~L~~-------~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~D 649 (783)
..++||||+++++|.+++.. ....+++..++.++.||+.||.|||+++ |+|+||||+|||++.++.+||+|
T Consensus 87 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~--i~H~dl~p~Nil~~~~~~~kl~d 164 (303)
T 2vwi_A 87 ELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNG--QIHRDVKAGNILLGEDGSVQIAD 164 (303)
T ss_dssp CEEEEEECCTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHHHTT--CCCCCCSGGGEEECTTCCEEECC
T ss_pred CcEEEehhccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCC--CCCCCCChhhEEEcCCCCEEEEe
Confidence 99999999999999999864 2445899999999999999999999998 99999999999999999999999
Q ss_pred cCCCccccccc-----ccccCCCCCCcccCcccccC-CCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccc-
Q 003963 650 FGLSRLKHETY-----LTTKTGKGTPQWMAPEVLRN-EPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMN- 722 (783)
Q Consensus 650 FGla~~~~~~~-----~~~~~~~Gt~~Y~aPE~~~~-~~~s~~sDIwSLG~il~elltG~~Pf~~~~~~~~~~~i~~~~- 722 (783)
||++....... .......||+.|+|||++.+ ..++.++|||||||++|+|++|..||................
T Consensus 165 fg~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~ 244 (303)
T 2vwi_A 165 FGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQNDP 244 (303)
T ss_dssp CHHHHHCC---------------CCCTTCCHHHHHHHHCCCTHHHHHHHHHHHHHHHHSSCTTTTSCGGGHHHHHHTSSC
T ss_pred ccchheeccCCCccchhhhcccCCCccccCHHHhccccCCCchhhHHHHHHHHHHHHhCCCCCccCchhhHHHHHhccCC
Confidence 99886544321 11234568999999999876 568999999999999999999999998877655443321111
Q ss_pred -------ccccCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhcCcC
Q 003963 723 -------QRLEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQASRS 773 (783)
Q Consensus 723 -------~~~~~~~~~s~~l~~LI~~cL~~dP~~RPsa~ell~~L~~L~~~~f~~~~~ 773 (783)
........+++++.+||.+||..||.+||++.++ ++|+||+..+.
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~l------l~h~~~~~~~~ 296 (303)
T 2vwi_A 245 PSLETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAEL------LRHKFFQKAKN 296 (303)
T ss_dssp CCTTC-----CCCCCCCHHHHHHHHHHCCSSGGGSCCHHHH------HTSTTC-----
T ss_pred CccccccccchhhhhhhHHHHHHHHHHccCChhhCcCHHHH------hhChhhhcCCC
Confidence 1122345688999999999999999999999999 67899976543
No 214
>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}
Probab=100.00 E-value=5.2e-40 Score=356.22 Aligned_cols=262 Identities=26% Similarity=0.431 Sum_probs=198.2
Q ss_pred cccccccceeEeeeeccCCcEEEEEEEEeC-CceEEEEEEecccCCHHHHHHHHHHHHHHHhCC-CCceeeEeceee---
Q 003963 499 DYEILWEDLTIGEQIGQGSCGTVYHAVWYG-SQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLR-HPNVLLFMGAVT--- 573 (783)
Q Consensus 499 ~~e~~~~~y~i~~~LG~G~fG~Vy~a~~~~-~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~-HpnIv~l~~~~~--- 573 (783)
..++...+|++.++||+|+||.||+|.+.. ++.||||++... .......+.+|+.+++.+. ||||+++++++.
T Consensus 22 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~ 99 (337)
T 3ll6_A 22 TVELGELRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSN--EEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGK 99 (337)
T ss_dssp EEEETTEEEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEES--SHHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECT
T ss_pred eeeccCceEEEEEEEccCCceEEEEEEECCCCcEEEEEEecCC--chHHHHHHHHHHHHHHHhccCCChhhccccccccc
Confidence 345556799999999999999999999864 578999998654 3445567889999999996 999999999983
Q ss_pred -----cCCceEEEEEecCCCCHHHHHhh--cCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEE
Q 003963 574 -----SPQRLCIVTEFLPRGSLFRLLQR--NTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVK 646 (783)
Q Consensus 574 -----~~~~~~lV~E~~~ggsL~~~L~~--~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vk 646 (783)
....+++||||+. |+|.+++.. ....+++..++.++.||+.||.|||+++.+|+||||||+||||+.++.+|
T Consensus 100 ~~~~~~~~~~~lv~e~~~-g~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~~~ivH~Dikp~NIl~~~~~~~k 178 (337)
T 3ll6_A 100 EESDTGQAEFLLLTELCK-GQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHRQKPPIIHRDLKVENLLLSNQGTIK 178 (337)
T ss_dssp TTSTTSSEEEEEEEECCS-EEHHHHHHHHHTTCSCCHHHHHHHHHHHHHHHHHHHTSSSCCBCCCCCGGGCEECTTSCEE
T ss_pred cccccCCceEEEEEEecC-CCHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhCCCCEEEccCCcccEEECCCCCEE
Confidence 3445899999995 699998864 34569999999999999999999999766699999999999999999999
Q ss_pred EEecCCCccccccccc------------ccCCCCCCcccCcccc---cCCCCCchhHHHHHHHHHHHHHcCCCCCCCCCh
Q 003963 647 VGDFGLSRLKHETYLT------------TKTGKGTPQWMAPEVL---RNEPSDEKSDVYSFGVILWELATEKIPWDNLNS 711 (783)
Q Consensus 647 L~DFGla~~~~~~~~~------------~~~~~Gt~~Y~aPE~~---~~~~~s~~sDIwSLG~il~elltG~~Pf~~~~~ 711 (783)
|+|||++......... .....||+.|+|||++ .+..++.++|||||||++|+|++|..||.....
T Consensus 179 l~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~ 258 (337)
T 3ll6_A 179 LCDFGSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDGAK 258 (337)
T ss_dssp BCCCTTCBCCSSCC-------------------------------CCTTSCSSHHHHHHHHHHHHHHHHHSSCCC-----
T ss_pred EecCccceeccccCcccccccccccchhhccccCCCCcCChhhhhccccCCCChHHhHHHHHHHHHHHHhCCCCCcchhH
Confidence 9999999765432211 1134589999999998 566788999999999999999999999976554
Q ss_pred HHHHHHhhcccccccCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHH
Q 003963 712 MQVIGAVGFMNQRLEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQY 767 (783)
Q Consensus 712 ~~~~~~i~~~~~~~~~~~~~s~~l~~LI~~cL~~dP~~RPsa~ell~~L~~L~~~~ 767 (783)
...... ......+..++..+.+||.+||+.||.+||++.++++.|+.+....
T Consensus 259 ~~~~~~----~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~~~~~~~ 310 (337)
T 3ll6_A 259 LRIVNG----KYSIPPHDTQYTVFHSLIRAMLQVNPEERLSIAEVVHQLQEIAAAR 310 (337)
T ss_dssp -----------CCCCTTCCSSGGGHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHHT
T ss_pred HHhhcC----cccCCcccccchHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhcc
Confidence 433221 2233445667888999999999999999999999999999887653
No 215
>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*
Probab=100.00 E-value=4.7e-40 Score=388.69 Aligned_cols=259 Identities=26% Similarity=0.484 Sum_probs=218.6
Q ss_pred ccceeEe-eeeccCCcEEEEEEEEeC---CceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEeceeecCCceE
Q 003963 504 WEDLTIG-EQIGQGSCGTVYHAVWYG---SQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLC 579 (783)
Q Consensus 504 ~~~y~i~-~~LG~G~fG~Vy~a~~~~---~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~ 579 (783)
.+.+.+. ++||+|+||.||+|.+.. ++.||||+++.........+.+.+|+.+|+.++|||||++++++.. +.++
T Consensus 367 ~~~~~l~~~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~-~~~~ 445 (635)
T 4fl3_A 367 RKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEA-ESWM 445 (635)
T ss_dssp GGGEEEEEEEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHCCCTTBCCEEEEEES-SSEE
T ss_pred chhccccCCEeccCCCEEEEEEEEcCCCcceEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEec-CCEE
Confidence 3445553 489999999999997643 3579999998766555556789999999999999999999999974 5689
Q ss_pred EEEEecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCcccccc
Q 003963 580 IVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHET 659 (783)
Q Consensus 580 lV~E~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~~~ 659 (783)
+|||||++|+|.+++... ..+++..++.++.||+.||+|||+++ ||||||||+||||+.++.+||+|||+++.....
T Consensus 446 lv~E~~~~g~L~~~l~~~-~~l~~~~~~~i~~qi~~~L~yLH~~~--iiHrDLkp~NILl~~~~~~kL~DFGla~~~~~~ 522 (635)
T 4fl3_A 446 LVMEMAELGPLNKYLQQN-RHVKDKNIIELVHQVSMGMKYLEESN--FVHRDLAARNVLLVTQHYAKISDFGLSKALRAD 522 (635)
T ss_dssp EEEECCTTEEHHHHHHHC-TTCCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCSGGGEEEEETTEEEECCTTHHHHTTC-
T ss_pred EEEEccCCCCHHHHHhhC-CCCCHHHHHHHHHHHHHHHHHHHHCC--EeCCCCChHhEEEeCCCCEEEEEcCCccccccC
Confidence 999999999999999764 46899999999999999999999998 999999999999999999999999999765432
Q ss_pred c---ccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCChHHHHHHhhcccccccCCCCCCHHH
Q 003963 660 Y---LTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELAT-EKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRW 735 (783)
Q Consensus 660 ~---~~~~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~l 735 (783)
. .......+|+.|+|||++.+..++.++|||||||+||||++ |+.||...+..+....+. .......+..+++++
T Consensus 523 ~~~~~~~~~~~~t~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~~~~~i~-~~~~~~~p~~~~~~l 601 (635)
T 4fl3_A 523 ENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLE-KGERMGCPAGCPREM 601 (635)
T ss_dssp ------------CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHH-TTCCCCCCTTCCHHH
T ss_pred ccccccccCCCCceeeeChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHH-cCCCCCCCCCCCHHH
Confidence 2 12223456789999999999999999999999999999998 999999998887776654 334567788899999
Q ss_pred HHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHH
Q 003963 736 AAIVESCWHSDPQCRPSFQELVDKLRDLQRQY 767 (783)
Q Consensus 736 ~~LI~~cL~~dP~~RPsa~ell~~L~~L~~~~ 767 (783)
.+||..||..||.+||++.+|++.|+++...+
T Consensus 602 ~~li~~cl~~dP~~RPs~~~l~~~L~~~~~~l 633 (635)
T 4fl3_A 602 YDLMNLCWTYDVENRPGFAAVELRLRNYYYDV 633 (635)
T ss_dssp HHHHHHHTCSSTTTSCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHcCCCHhHCcCHHHHHHHHHHHHHHh
Confidence 99999999999999999999999998776554
No 216
>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*
Probab=100.00 E-value=9.4e-40 Score=357.69 Aligned_cols=260 Identities=24% Similarity=0.335 Sum_probs=213.5
Q ss_pred cccceeEeeeeccCCcEEEEEEEEeC-CceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEeceeecC-----C
Q 003963 503 LWEDLTIGEQIGQGSCGTVYHAVWYG-SQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSP-----Q 576 (783)
Q Consensus 503 ~~~~y~i~~~LG~G~fG~Vy~a~~~~-~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~-----~ 576 (783)
..++|++.+.||+|+||.||+|.+.. ++.||||++.... .......+.+|+.+++.++||||+++++++... .
T Consensus 9 i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 87 (353)
T 2b9h_A 9 ISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFD-KPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENFN 87 (353)
T ss_dssp SCTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCS-SHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCSTTCC
T ss_pred cccceEEeeEEcCCCCeEEEEEEECCCCcEEEEEeecccc-cchHHHHHHHHHHHHHhCcCCCcCCeeeeecccccCccc
Confidence 45799999999999999999999864 5679999986433 345566788999999999999999999987654 6
Q ss_pred ceEEEEEecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCccc
Q 003963 577 RLCIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLK 656 (783)
Q Consensus 577 ~~~lV~E~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~ 656 (783)
..|+||||+. ++|.+++... .+++..++.++.||+.||.|||+++ |+||||||+|||++.++.+||+|||++...
T Consensus 88 ~~~lv~e~~~-~~L~~~~~~~--~~~~~~~~~~~~qi~~~L~~LH~~~--ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~ 162 (353)
T 2b9h_A 88 EVYIIQELMQ-TDLHRVISTQ--MLSDDHIQYFIYQTLRAVKVLHGSN--VIHRDLKPSNLLINSNCDLKVCDFGLARII 162 (353)
T ss_dssp CEEEEECCCS-EEHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHHHTT--EECSCCCGGGEEECTTCCEEECCCTTCEEC
T ss_pred eEEEEEeccC-ccHHHHHhhc--CCCHHHHHHHHHHHHHHHHHHHHCC--eecCCCCHHHeEEcCCCcEEEEeccccccc
Confidence 7899999996 5999998763 5899999999999999999999998 999999999999999999999999999865
Q ss_pred cccccc----------ccCCCCCCcccCcccccC-CCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccccc-
Q 003963 657 HETYLT----------TKTGKGTPQWMAPEVLRN-EPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQR- 724 (783)
Q Consensus 657 ~~~~~~----------~~~~~Gt~~Y~aPE~~~~-~~~s~~sDIwSLG~il~elltG~~Pf~~~~~~~~~~~i~~~~~~- 724 (783)
...... ....+||+.|+|||++.+ ..++.++|||||||++|+|++|.+||...+.......+......
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~ 242 (353)
T 2b9h_A 163 DESAADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTP 242 (353)
T ss_dssp C----------------CCCCCCGGGCCHHHHHSCCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCC
T ss_pred ccccccccCccccccchhhccccccccCCeeeccCCCccchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCC
Confidence 432111 123478999999998765 67899999999999999999999999887765544332111000
Q ss_pred -----------------------------ccCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhcCcCC
Q 003963 725 -----------------------------LEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQASRST 774 (783)
Q Consensus 725 -----------------------------~~~~~~~s~~l~~LI~~cL~~dP~~RPsa~ell~~L~~L~~~~f~~~~~~ 774 (783)
...+..+++++.+||.+||..||.+|||+.++ ++|+||+.....
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~el------l~hp~~~~~~~~ 315 (353)
T 2b9h_A 243 HSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEA------LEHPYLQTYHDP 315 (353)
T ss_dssp CSTTTTTTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSSGGGSCCHHHH------HTSGGGTTTCCT
T ss_pred chhccccccccchhhHHhhcccCCCCcchhhhcccCCHHHHHHHHHhcCcCcccCCCHHHH------hcCccccccCCc
Confidence 01124688999999999999999999999999 679999876543
No 217
>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A
Probab=100.00 E-value=1.2e-40 Score=375.01 Aligned_cols=258 Identities=27% Similarity=0.434 Sum_probs=203.0
Q ss_pred ccccceeEeeeeccCCcEEEEEEEEeC-CceEEEEEEecccCC------HHHHHHHHHHHHHHHhCCCCceeeEeceeec
Q 003963 502 ILWEDLTIGEQIGQGSCGTVYHAVWYG-SQDVAVKVFSRQEYS------DEVIHSFRQEVSLMKRLRHPNVLLFMGAVTS 574 (783)
Q Consensus 502 ~~~~~y~i~~~LG~G~fG~Vy~a~~~~-~~~vAiK~i~~~~~~------~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~ 574 (783)
...++|.+.++||+|+||.||+|.+.. ++.||||++...... ......+.+|+.+|+.++|||||++++++..
T Consensus 132 ~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~ 211 (419)
T 3i6u_A 132 ALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDA 211 (419)
T ss_dssp HHHTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEEES
T ss_pred hhhccEEEEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEec
Confidence 346789999999999999999999865 478999999865421 1223357889999999999999999999864
Q ss_pred CCceEEEEEecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCC---cEEEEecC
Q 003963 575 PQRLCIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHW---TVKVGDFG 651 (783)
Q Consensus 575 ~~~~~lV~E~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~---~vkL~DFG 651 (783)
..+|+|||||++++|.+++... ..+++..++.++.||+.||+|||+++ |+||||||+||||+.++ .+||+|||
T Consensus 212 -~~~~lv~e~~~~g~L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~LH~~~--ivHrDlkp~NIll~~~~~~~~~kl~DFG 287 (419)
T 3i6u_A 212 -EDYYIVLELMEGGELFDKVVGN-KRLKEATCKLYFYQMLLAVQYLHENG--IIHRDLKPENVLLSSQEEDCLIKITDFG 287 (419)
T ss_dssp -SEEEEEEECCTTCBGGGGTSSS-CCCCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCCGGGEEESSSSSSCCEEECCSS
T ss_pred -CceEEEEEcCCCCcHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHHCC--ccccCCChHhEEEecCCCcceEEEeecc
Confidence 4589999999999999998754 46999999999999999999999998 99999999999997544 59999999
Q ss_pred CCcccccccccccCCCCCCcccCcccccC---CCCCchhHHHHHHHHHHHHHcCCCCCCCCChHH-HHHHhhccc--ccc
Q 003963 652 LSRLKHETYLTTKTGKGTPQWMAPEVLRN---EPSDEKSDVYSFGVILWELATEKIPWDNLNSMQ-VIGAVGFMN--QRL 725 (783)
Q Consensus 652 la~~~~~~~~~~~~~~Gt~~Y~aPE~~~~---~~~s~~sDIwSLG~il~elltG~~Pf~~~~~~~-~~~~i~~~~--~~~ 725 (783)
+++...... .....+||+.|+|||++.+ ..++.++|||||||++|+|++|.+||....... ....+.... ...
T Consensus 288 ~a~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~i~~~~~~~~~ 366 (419)
T 3i6u_A 288 HSKILGETS-LMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIP 366 (419)
T ss_dssp TTTSCC------------CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHHHSSCSSCCCSSSCCHHHHHHTTCCCCCH
T ss_pred cceecCCCc-cccccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCcchHHHHHHHhcCCCCCCc
Confidence 998765432 2335679999999999864 567889999999999999999999997654322 222221111 112
Q ss_pred cCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhc
Q 003963 726 EIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQA 770 (783)
Q Consensus 726 ~~~~~~s~~l~~LI~~cL~~dP~~RPsa~ell~~L~~L~~~~f~~ 770 (783)
..+..+++.+.+||.+||+.||.+||++.++ |+|+||+.
T Consensus 367 ~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~------l~hp~~~~ 405 (419)
T 3i6u_A 367 EVWAEVSEKALDLVKKLLVVDPKARFTTEEA------LRHPWLQD 405 (419)
T ss_dssp HHHTTSCHHHHHHHHHHSCSSTTTSCCHHHH------HHSGGGCC
T ss_pred hhhcccCHHHHHHHHHHccCChhHCcCHHHH------hCCcccCC
Confidence 2335689999999999999999999999999 67899965
No 218
>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=7.1e-40 Score=355.78 Aligned_cols=256 Identities=30% Similarity=0.524 Sum_probs=204.4
Q ss_pred cccccceeEeeeeccCCcEEEEEEEEeCCceEEEEEEecccCCHHHHHHHHHHHHHHHhC--CCCceeeEeceeecC---
Q 003963 501 EILWEDLTIGEQIGQGSCGTVYHAVWYGSQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRL--RHPNVLLFMGAVTSP--- 575 (783)
Q Consensus 501 e~~~~~y~i~~~LG~G~fG~Vy~a~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l--~HpnIv~l~~~~~~~--- 575 (783)
....++|++.++||+|+||.||+|.+. ++.||||++.... ...+.+|.+++..+ +||||+++++++...
T Consensus 33 ~~~~~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~-----~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~ 106 (337)
T 3mdy_A 33 RTIAKQIQMVKQIGKGRYGEVWMGKWR-GEKVAVKVFFTTE-----EASWFRETEIYQTVLMRHENILGFIAADIKGTGS 106 (337)
T ss_dssp TTHHHHCEEEEEEEEETTEEEEEEEET-TEEEEEEEEEGGG-----HHHHHHHHHHHTSTTCCCTTBCCEEEEEEESCGG
T ss_pred cccccceEEEeEeecCCCeEEEEEEEC-CceEEEEEEeccc-----cchhhhHHHHHHHHhhcCCCeeeEEEEEccCCCC
Confidence 445679999999999999999999876 6789999986543 13344566666554 899999999998876
Q ss_pred -CceEEEEEecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhC--------CCCEEecCCCCCCEEEcCCCcEE
Q 003963 576 -QRLCIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHC--------NPPIIHRDLKSSNLLVDKHWTVK 646 (783)
Q Consensus 576 -~~~~lV~E~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~--------~~~IvHrDIKp~NILl~~~~~vk 646 (783)
..+|+||||+++++|.+++... .+++..++.++.|++.||.|||+. + |+||||||+||||+.++.+|
T Consensus 107 ~~~~~lv~e~~~~g~L~~~l~~~--~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~--ivH~Dikp~Nill~~~~~~k 182 (337)
T 3mdy_A 107 WTQLYLITDYHENGSLYDYLKST--TLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPA--IAHRDLKSKNILVKKNGTCC 182 (337)
T ss_dssp GCEEEEEECCCTTCBHHHHHHHC--CBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCC--EECSCCCGGGEEECTTSCEE
T ss_pred CCceEEEEeccCCCcHHHHhhcc--CCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCC--EEecccchHHEEECCCCCEE
Confidence 6789999999999999999754 589999999999999999999998 7 99999999999999999999
Q ss_pred EEecCCCccccccccc----ccCCCCCCcccCcccccCCCCCch------hHHHHHHHHHHHHHcC----------CCCC
Q 003963 647 VGDFGLSRLKHETYLT----TKTGKGTPQWMAPEVLRNEPSDEK------SDVYSFGVILWELATE----------KIPW 706 (783)
Q Consensus 647 L~DFGla~~~~~~~~~----~~~~~Gt~~Y~aPE~~~~~~~s~~------sDIwSLG~il~elltG----------~~Pf 706 (783)
|+|||++......... .....||+.|+|||++.+...... +|||||||++|+|++| ..||
T Consensus 183 l~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~~~~~~~~~~~p~ 262 (337)
T 3mdy_A 183 IADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQLPY 262 (337)
T ss_dssp ECCCTTCEECC---------CCSSCSCGGGCCHHHHTTCCCTTCTHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTT
T ss_pred EEeCCCceeeccccccccCCCCCCccCcceeChhhcccccCCccccCccccchHHHHHHHHHHHhccCcccccccccccH
Confidence 9999999765433221 224579999999999988776554 9999999999999999 7777
Q ss_pred CCCCh-----HHHHHHhhcccccccCCC-----CCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHH
Q 003963 707 DNLNS-----MQVIGAVGFMNQRLEIPK-----DVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQ 766 (783)
Q Consensus 707 ~~~~~-----~~~~~~i~~~~~~~~~~~-----~~s~~l~~LI~~cL~~dP~~RPsa~ell~~L~~L~~~ 766 (783)
..... ......+........++. .+++++.+||.+||..||.+|||+.+++++|+++...
T Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~~ 332 (337)
T 3mdy_A 263 HDLVPSDPSYEDMREIVCIKKLRPSFPNRWSSDECLRQMGKLMTECWAHNPASRLTALRVKKTLAKMSES 332 (337)
T ss_dssp TTTSCSSCCHHHHHHHHTTSCCCCCCCGGGGGSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred hhhcCCCCchhhhHHHHhhhccCccccccchhhHHHHHHHHHHHHhhhhChhhCCCHHHHHHHHHHHHhh
Confidence 65422 122222222222333332 4567899999999999999999999999999988653
No 219
>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}
Probab=100.00 E-value=1e-39 Score=358.27 Aligned_cols=256 Identities=23% Similarity=0.365 Sum_probs=213.3
Q ss_pred cccceeEeeeeccCCcEEEEEEEEeC-CceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEeceeecCCc----
Q 003963 503 LWEDLTIGEQIGQGSCGTVYHAVWYG-SQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQR---- 577 (783)
Q Consensus 503 ~~~~y~i~~~LG~G~fG~Vy~a~~~~-~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~---- 577 (783)
..++|.+.+.||+|+||.||+|.+.. ++.||||++............+.+|+.+++.++||||+++++++.....
T Consensus 22 l~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 101 (353)
T 3coi_A 22 LPKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNF 101 (353)
T ss_dssp EETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEESSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGC
T ss_pred cCceEEEeeeEecCCCeEEEEEEECCCCCEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCcccHhheEecccccccc
Confidence 34789999999999999999999864 5789999998766666667889999999999999999999999987654
Q ss_pred --eEEEEEecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCcc
Q 003963 578 --LCIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRL 655 (783)
Q Consensus 578 --~~lV~E~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~ 655 (783)
+|+||||+. ++|.+++.. .+++..++.++.||+.||.|||+++ |+||||||+|||++.++.+||+|||++..
T Consensus 102 ~~~~lv~e~~~-~~l~~~~~~---~~~~~~~~~i~~qi~~al~~LH~~~--ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~ 175 (353)
T 3coi_A 102 YDFYLVMPFMQ-TDLQKIMGL---KFSEEKIQYLVYQMLKGLKYIHSAG--VVHRDLKPGNLAVNEDCELKILDFGLARH 175 (353)
T ss_dssp CCCEEEEECCS-EEGGGTTTS---CCCHHHHHHHHHHHHHHHHHHHHTT--CCCSSCCGGGEEECTTCCEEECSTTCTTC
T ss_pred eeEEEEecccc-CCHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCC--cccCCCCHHHEeECCCCcEEEeecccccC
Confidence 499999996 588887743 4899999999999999999999998 99999999999999999999999999976
Q ss_pred cccccccccCCCCCCcccCcccccC-CCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccc------------
Q 003963 656 KHETYLTTKTGKGTPQWMAPEVLRN-EPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMN------------ 722 (783)
Q Consensus 656 ~~~~~~~~~~~~Gt~~Y~aPE~~~~-~~~s~~sDIwSLG~il~elltG~~Pf~~~~~~~~~~~i~~~~------------ 722 (783)
.... .....||+.|+|||++.+ ..++.++|||||||++|+|++|..||...+....+..+....
T Consensus 176 ~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 252 (353)
T 3coi_A 176 ADAE---MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLN 252 (353)
T ss_dssp -----------CCSBCCSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSSBSSCHHHHHHHHHHHHCBCCHHHHTTCS
T ss_pred CCCC---ccccccCcCcCCHHHHhCcCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHHh
Confidence 5432 234578999999999887 678999999999999999999999998877655444332110
Q ss_pred -----------------ccccCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhcCcC
Q 003963 723 -----------------QRLEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQASRS 773 (783)
Q Consensus 723 -----------------~~~~~~~~~s~~l~~LI~~cL~~dP~~RPsa~ell~~L~~L~~~~f~~~~~ 773 (783)
.....+..+++++.+||.+||..||.+|||+.++ +.|+||+..+.
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~------l~hp~f~~~~~ 314 (353)
T 3coi_A 253 DKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQA------LTHPFFEPFRD 314 (353)
T ss_dssp CHHHHHHHHTSCBCSSCCTTTTCTTSCHHHHHHHHHHSCSCTTTSCCHHHH------HTSGGGTTTCC
T ss_pred hHHHHHHHHhCcCCCCccHHHhcCCcCHHHHHHHHHHcCCCcccCCCHHHH------hcCcchhhccC
Confidence 0112335678999999999999999999999999 68999976543
No 220
>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}
Probab=100.00 E-value=5.2e-40 Score=354.28 Aligned_cols=260 Identities=22% Similarity=0.289 Sum_probs=209.8
Q ss_pred cccccceeEeeeeccCCcEEEEEEEEe-CCceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEeceee----cC
Q 003963 501 EILWEDLTIGEQIGQGSCGTVYHAVWY-GSQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVT----SP 575 (783)
Q Consensus 501 e~~~~~y~i~~~LG~G~fG~Vy~a~~~-~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~----~~ 575 (783)
.+..++|++.+.||+|+||.||++.+. .++.||||++... .......+.+|+.+++.++||||+++++++. ..
T Consensus 25 ~i~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 102 (317)
T 2buj_A 25 IIDNKHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCH--EQQDREEAQREADMHRLFNHPNILRLVAYCLRERGAK 102 (317)
T ss_dssp EETTEEEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEES--SHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEETTE
T ss_pred EECCeEEEEEEEecCCCCeEEEEEEecCCCcEEEEEEEecC--CHHHHHHHHHHHHHHhhcCCCCeeeEEEEEEeccCCC
Confidence 345678999999999999999999984 4578999998653 3455678899999999999999999999986 34
Q ss_pred CceEEEEEecCCCCHHHHHhh---cCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCC
Q 003963 576 QRLCIVTEFLPRGSLFRLLQR---NTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGL 652 (783)
Q Consensus 576 ~~~~lV~E~~~ggsL~~~L~~---~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGl 652 (783)
...++||||+.+++|.+++.. ....+++..++.++.||+.||.|||+++ |+||||||+||||+.++.+||+|||+
T Consensus 103 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~--ivH~dlkp~NIl~~~~~~~kl~dfg~ 180 (317)
T 2buj_A 103 HEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAKG--YAHRDLKPTNILLGDEGQPVLMDLGS 180 (317)
T ss_dssp EEEEEEEECCTTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTT--EECCCCCGGGEEECTTSCEEECCCSS
T ss_pred ceeEEEEEeCCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCC--cccCCCCHHHEEEcCCCCEEEEecCc
Confidence 478999999999999999975 3566899999999999999999999998 99999999999999999999999999
Q ss_pred Cccccccccc---------ccCCCCCCcccCcccccCCC---CCchhHHHHHHHHHHHHHcCCCCCCCCCh--HHHHHHh
Q 003963 653 SRLKHETYLT---------TKTGKGTPQWMAPEVLRNEP---SDEKSDVYSFGVILWELATEKIPWDNLNS--MQVIGAV 718 (783)
Q Consensus 653 a~~~~~~~~~---------~~~~~Gt~~Y~aPE~~~~~~---~s~~sDIwSLG~il~elltG~~Pf~~~~~--~~~~~~i 718 (783)
+......... .....||+.|+|||++.+.. ++.++|||||||++|+|++|..||..... ......+
T Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~ 260 (317)
T 2buj_A 181 MNQACIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGDSVALAV 260 (317)
T ss_dssp CEESCEEEESHHHHHHHHHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHHHHHHHHHHHHSSCTTHHHHHTTSCHHHHH
T ss_pred chhcccccccccccccccccccccCCcccCCHhHhccCCCcCCCchhhHHHHHHHHHHHHhCCCChhhhhcccchhhHHh
Confidence 8754321110 11234799999999988665 58899999999999999999999953211 0111111
Q ss_pred hcccccccCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHH
Q 003963 719 GFMNQRLEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQR 765 (783)
Q Consensus 719 ~~~~~~~~~~~~~s~~l~~LI~~cL~~dP~~RPsa~ell~~L~~L~~ 765 (783)
. .....+.+..+++.+.+||.+||..||.+||++.++++.|+.++.
T Consensus 261 ~-~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~~~~ 306 (317)
T 2buj_A 261 Q-NQLSIPQSPRHSSALWQLLNSMMTVDPHQRPHIPLLLSQLEALQP 306 (317)
T ss_dssp H-CC--CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTCC
T ss_pred h-ccCCCCccccCCHHHHHHHHHHhhcChhhCCCHHHHHHHhhhcCC
Confidence 1 122334456789999999999999999999999999999987654
No 221
>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}
Probab=100.00 E-value=4.5e-40 Score=361.16 Aligned_cols=256 Identities=15% Similarity=0.198 Sum_probs=210.1
Q ss_pred cccceeEeeeeccCCcEEEEEEEEeC---------CceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceee------
Q 003963 503 LWEDLTIGEQIGQGSCGTVYHAVWYG---------SQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLL------ 567 (783)
Q Consensus 503 ~~~~y~i~~~LG~G~fG~Vy~a~~~~---------~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~------ 567 (783)
..++|++.+.||+|+||.||+|.+.. ++.||||++... ..+.+|+.+++.++||||++
T Consensus 40 ~~~~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~-------~~~~~E~~~l~~l~h~niv~~~~~~~ 112 (352)
T 2jii_A 40 SGRQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD-------GRLFNEQNFFQRAAKPLQVNKWKKLY 112 (352)
T ss_dssp TSCEEEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETT-------STHHHHHHHHHHHCCHHHHHHHHHHT
T ss_pred cCCeEEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc-------chHHHHHHHHHHhcccchhhhhhhhc
Confidence 35799999999999999999999864 578999998764 25678999999999999998
Q ss_pred ---------Eeceeec-CCceEEEEEecCCCCHHHHHhhc-CCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCC
Q 003963 568 ---------FMGAVTS-PQRLCIVTEFLPRGSLFRLLQRN-TTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSN 636 (783)
Q Consensus 568 ---------l~~~~~~-~~~~~lV~E~~~ggsL~~~L~~~-~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~N 636 (783)
+++++.. ...+|+||||+ +++|.+++... ...+++..++.++.||+.||.|||+++ |+||||||+|
T Consensus 113 ~~~~~~i~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~--ivH~Dikp~N 189 (352)
T 2jii_A 113 STPLLAIPTCMGFGVHQDKYRFLVLPSL-GRSLQSALDVSPKHVLSERSVLQVACRLLDALEFLHENE--YVHGNVTAEN 189 (352)
T ss_dssp TCTTCSCCCCCEEEEETTTEEEEEEECC-CEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHTT--CBCSCCCGGG
T ss_pred cCCccCccchhhccccCCcEEEEEecCC-CcCHHHHHHhCCcCCCCHHHHHHHHHHHHHHHHHHHhCC--ccCCCCCHHH
Confidence 4555554 67889999999 99999999864 356999999999999999999999998 9999999999
Q ss_pred EEEcCCC--cEEEEecCCCcccccccc-------cccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCC
Q 003963 637 LLVDKHW--TVKVGDFGLSRLKHETYL-------TTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWD 707 (783)
Q Consensus 637 ILl~~~~--~vkL~DFGla~~~~~~~~-------~~~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~elltG~~Pf~ 707 (783)
||++.++ .+||+|||+++....... ......||+.|+|||++.+..++.++|||||||+||+|++|..||.
T Consensus 190 Il~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~ 269 (352)
T 2jii_A 190 IFVDPEDQSQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDLHKGCGPSRRSDLQSLGYCMLKWLYGFLPWT 269 (352)
T ss_dssp EEEETTEEEEEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTG
T ss_pred EEEcCCCCceEEEecCcceeeccCCCccccccccccccccCCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCcc
Confidence 9999998 999999999976543321 1123478999999999999999999999999999999999999998
Q ss_pred CCC--hHHHHHHhhc-ccccccCC------CCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHh
Q 003963 708 NLN--SMQVIGAVGF-MNQRLEIP------KDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYF 768 (783)
Q Consensus 708 ~~~--~~~~~~~i~~-~~~~~~~~------~~~s~~l~~LI~~cL~~dP~~RPsa~ell~~L~~L~~~~f 768 (783)
... .......... ......++ ..+++++.+||.+||..||.+||++.++++.|+++....-
T Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~~~~ 339 (352)
T 2jii_A 270 NCLPNTEDIMKQKQKFVDKPGPFVGPCGHWIRPSETLQKYLKVVMALTYEEKPPYAMLRNNLEALLQDLR 339 (352)
T ss_dssp GGTTCHHHHHHHHHHHHHSCCCEECTTSCEECCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHHTT
T ss_pred cCCcCHHHHHHHHHhccCChhhhhhhccccCCCcHHHHHHHHHHHhCChhhCCCHHHHHHHHHHHHHhcC
Confidence 653 2222222211 11111111 2568999999999999999999999999999998877753
No 222
>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*
Probab=100.00 E-value=6.2e-40 Score=347.17 Aligned_cols=251 Identities=25% Similarity=0.368 Sum_probs=211.0
Q ss_pred cccceeEeeeeccCCcEEEEEEEEe-CCceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEeceeec-------
Q 003963 503 LWEDLTIGEQIGQGSCGTVYHAVWY-GSQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTS------- 574 (783)
Q Consensus 503 ~~~~y~i~~~LG~G~fG~Vy~a~~~-~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~------- 574 (783)
...+|++.+.||+|+||.||+|.+. .++.||+|++.... ..+.+|+.+++.++||||+++++++..
T Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~------~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 82 (284)
T 2a19_B 9 FGMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN------EKAEREVKALAKLDHVNIVHYNGCWDGFDYDPET 82 (284)
T ss_dssp HHHHEEEEEEEECSSSCCEEEEEETTTCCEEEEEEEECCS------GGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC---
T ss_pred hccccceeeeeccCCceEEEEEEEcCCCeEEEEEEecccc------HHHHHHHHHHHhCCCCCEEEEeeeEeccccCccc
Confidence 4578999999999999999999986 46789999997653 246689999999999999999998854
Q ss_pred ---------CCceEEEEEecCCCCHHHHHhhc-CCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCc
Q 003963 575 ---------PQRLCIVTEFLPRGSLFRLLQRN-TTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWT 644 (783)
Q Consensus 575 ---------~~~~~lV~E~~~ggsL~~~L~~~-~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~ 644 (783)
...+++||||+++++|.+++... ...+++..++.++.||+.||.|||+++ |+|+||||+|||++.++.
T Consensus 83 ~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~--i~H~dlkp~Nil~~~~~~ 160 (284)
T 2a19_B 83 SSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSKK--LINRDLKPSNIFLVDTKQ 160 (284)
T ss_dssp ------CCEEEEEEEEECCCCSCBHHHHHHHGGGSCCCHHHHHHHHHHHHHHHHHHHHTT--EECSCCSGGGEEEEETTE
T ss_pred ccccccccCcceEEEEEeccCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhCC--eeeccCCHHHEEEcCCCC
Confidence 34589999999999999999753 356899999999999999999999998 999999999999999999
Q ss_pred EEEEecCCCcccccccccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccccc
Q 003963 645 VKVGDFGLSRLKHETYLTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQR 724 (783)
Q Consensus 645 vkL~DFGla~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~elltG~~Pf~~~~~~~~~~~i~~~~~~ 724 (783)
+||+|||++....... ......|++.|+|||++.+..++.++|||||||++|+|++|..||... ......+ ..
T Consensus 161 ~kl~Dfg~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~--~~~~~~~----~~ 233 (284)
T 2a19_B 161 VKIGDFGLVTSLKNDG-KRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFET--SKFFTDL----RD 233 (284)
T ss_dssp EEECCCTTCEESSCCS-CCCCCCSCCTTSCHHHHHCSCCCTHHHHHHHHHHHHHHHSCCSSHHHH--HHHHHHH----HT
T ss_pred EEECcchhheeccccc-cccccCCcccccChhhhccCCCcchhhhHHHHHHHHHHHhcCCcchhH--HHHHHHh----hc
Confidence 9999999987665432 223457899999999999999999999999999999999999887432 1222222 12
Q ss_pred ccCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHh
Q 003963 725 LEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYF 768 (783)
Q Consensus 725 ~~~~~~~s~~l~~LI~~cL~~dP~~RPsa~ell~~L~~L~~~~f 768 (783)
..++..+++.+.+||.+||..||.+||++.++++.|..+++..-
T Consensus 234 ~~~~~~~~~~~~~li~~~l~~dp~~Rps~~e~l~~l~~~~~~~~ 277 (284)
T 2a19_B 234 GIISDIFDKKEKTLLQKLLSKKPEDRPNTSEILRTLTVWKKSPE 277 (284)
T ss_dssp TCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHTC---
T ss_pred ccccccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHhhCCC
Confidence 34567789999999999999999999999999999987765433
No 223
>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}
Probab=100.00 E-value=1.6e-39 Score=358.44 Aligned_cols=260 Identities=17% Similarity=0.204 Sum_probs=212.2
Q ss_pred ccccccccceeEeeeeccCCcEEEEEEE------EeCCceEEEEEEecccCCHHHHHHHHHHHHHHHhCC---CCceeeE
Q 003963 498 LDYEILWEDLTIGEQIGQGSCGTVYHAV------WYGSQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLR---HPNVLLF 568 (783)
Q Consensus 498 ~~~e~~~~~y~i~~~LG~G~fG~Vy~a~------~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~---HpnIv~l 568 (783)
..+++..++|.+.++||+|+||.||+|. ...++.||||++.... ...+..|+.+++.++ |+||+++
T Consensus 58 ~~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~-----~~~~~~e~~~~~~l~~~~~~~iv~~ 132 (365)
T 3e7e_A 58 TEFQLGSKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPAN-----PWEFYIGTQLMERLKPSMQHMFMKF 132 (365)
T ss_dssp CEEECSSSEEEEEEEEEECSSEEEEEEEC-------CCCCEEEEEESSCC-----HHHHHHHHHHHHHSCGGGGGGBCCE
T ss_pred eeEEECCEEEEEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCCC-----hhHHHHHHHHHHHhhhhhhhhhhhh
Confidence 3455667899999999999999999994 3445789999986543 245777888888887 8999999
Q ss_pred eceeecCCceEEEEEecCCCCHHHHHhh----cCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcC---
Q 003963 569 MGAVTSPQRLCIVTEFLPRGSLFRLLQR----NTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDK--- 641 (783)
Q Consensus 569 ~~~~~~~~~~~lV~E~~~ggsL~~~L~~----~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~--- 641 (783)
++++...+..|+|||||++|+|.+++.. ....+++..++.++.||+.||+|||+++ ||||||||+||||+.
T Consensus 133 ~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~--ivHrDiKp~NIll~~~~~ 210 (365)
T 3e7e_A 133 YSAHLFQNGSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHDCE--IIHGDIKPDNFILGNGFL 210 (365)
T ss_dssp EEEEECSSCEEEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHHTTT--EECCCCSGGGEEECGGGT
T ss_pred heeeecCCCcEEEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHhhCC--eecCCCCHHHEEeccccc
Confidence 9999999999999999999999999974 3456999999999999999999999998 999999999999998
Q ss_pred --------CCcEEEEecCCCccccc--ccccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCCh
Q 003963 642 --------HWTVKVGDFGLSRLKHE--TYLTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNS 711 (783)
Q Consensus 642 --------~~~vkL~DFGla~~~~~--~~~~~~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~elltG~~Pf~~~~~ 711 (783)
++.+||+|||+++.... ........+||+.|+|||++.+..++.++|||||||++|+|++|+.||.....
T Consensus 211 ~~~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~ 290 (365)
T 3e7e_A 211 EQDDEDDLSAGLALIDLGQSIDMKLFPKGTIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGTYMKVKNEG 290 (365)
T ss_dssp CC------CTTEEECCCTTCEEGGGSCTTEEECCSSCTTSCCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCCCEEEET
T ss_pred CccccccccCCEEEeeCchhhhhhccCCCceeeeecCCCCCCChHHhcCCCCCccccHHHHHHHHHHHHhCCCccccCCC
Confidence 89999999999975432 22233456799999999999999999999999999999999999999954322
Q ss_pred HHHHHHhhcccccccCCCCCCHHHHHHHHHhhhhCCCCC-CCHHHHHHHHHHHHHHHhhc
Q 003963 712 MQVIGAVGFMNQRLEIPKDVDPRWAAIVESCWHSDPQCR-PSFQELVDKLRDLQRQYFQA 770 (783)
Q Consensus 712 ~~~~~~i~~~~~~~~~~~~~s~~l~~LI~~cL~~dP~~R-Psa~ell~~L~~L~~~~f~~ 770 (783)
.. ........ ....++.+.+++..||..+|.+| |++.++.+.|+++...-++.
T Consensus 291 ~~-----~~~~~~~~-~~~~~~~~~~~~~~~l~~~p~~r~~~~~~l~~~l~~~l~~~~~~ 344 (365)
T 3e7e_A 291 GE-----CKPEGLFR-RLPHLDMWNEFFHVMLNIPDCHHLPSLDLLRQKLKKVFQQHYTN 344 (365)
T ss_dssp TE-----EEECSCCT-TCSSHHHHHHHHHHHHCCCCTTCCCCHHHHHHHHHHHHHHHTTT
T ss_pred Cc-----eeechhcc-ccCcHHHHHHHHHHHcCCCCCCcchHHHHHHHHHHHHHHHhhhh
Confidence 11 00011111 11246789999999999999998 58888888888877765543
No 224
>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*
Probab=100.00 E-value=2.6e-40 Score=367.12 Aligned_cols=254 Identities=21% Similarity=0.303 Sum_probs=205.1
Q ss_pred ccccceeEeeeeccCCcEEEEEEEEeC-CceEEEEEEecccCCHHHHHHHHHHHHHHHhCC--------CCceeeEecee
Q 003963 502 ILWEDLTIGEQIGQGSCGTVYHAVWYG-SQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLR--------HPNVLLFMGAV 572 (783)
Q Consensus 502 ~~~~~y~i~~~LG~G~fG~Vy~a~~~~-~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~--------HpnIv~l~~~~ 572 (783)
...++|++.++||+|+||.||+|.+.. ++.||||++... ......+.+|+.+++.++ |+||+++++++
T Consensus 34 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~ 110 (397)
T 1wak_A 34 LFNGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSA---EHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDF 110 (397)
T ss_dssp EETTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC---HHHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEE
T ss_pred hcCCeEEEEEEeeecCCeeEEEEEecCCCeEEEEEEEecC---CcchHHHHHHHHHHHHHhhcCCCCCCcceeeeeecce
Confidence 445899999999999999999999865 567999998643 345567889999999985 78899999998
Q ss_pred e----cCCceEEEEEecCCCCHHHHHhh-cCCcchHHHHHHHHHHHHHHHHHHHhC-CCCEEecCCCCCCEEEcCCC---
Q 003963 573 T----SPQRLCIVTEFLPRGSLFRLLQR-NTTKLDWRRRILMALDIARGVSYLHHC-NPPIIHRDLKSSNLLVDKHW--- 643 (783)
Q Consensus 573 ~----~~~~~~lV~E~~~ggsL~~~L~~-~~~~l~~~~~~~i~~qi~~aL~~LH~~-~~~IvHrDIKp~NILl~~~~--- 643 (783)
. ....+|+||||+ +++|.+++.. ....+++..++.++.||+.||+|||++ | |+||||||+||||+.++
T Consensus 111 ~~~~~~~~~~~lv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~g--ivHrDikp~NIll~~~~~~~ 187 (397)
T 1wak_A 111 KISGVNGTHICMVFEVL-GHHLLKWIIKSNYQGLPLPCVKKIIQQVLQGLDYLHTKCR--IIHTDIKPENILLSVNEQYI 187 (397)
T ss_dssp EEEETTEEEEEEEECCC-CCBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTC--EECCCCSGGGEEECCCHHHH
T ss_pred eecCCCCceEEEEEecc-CccHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHhCC--EecCCCCHHHeeEeccchhh
Confidence 7 556799999999 5567666654 335699999999999999999999998 8 99999999999998775
Q ss_pred ----------------------------------------------cEEEEecCCCcccccccccccCCCCCCcccCccc
Q 003963 644 ----------------------------------------------TVKVGDFGLSRLKHETYLTTKTGKGTPQWMAPEV 677 (783)
Q Consensus 644 ----------------------------------------------~vkL~DFGla~~~~~~~~~~~~~~Gt~~Y~aPE~ 677 (783)
.+||+|||++...... ....+||+.|+|||+
T Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~~---~~~~~gt~~y~aPE~ 264 (397)
T 1wak_A 188 RRLAAEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKH---FTEDIQTRQYRSLEV 264 (397)
T ss_dssp HHHHHHHC---------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTBC---SCSCCSCGGGCCHHH
T ss_pred hhhhhhhHHHhhcCCCCCCCCccccCCcccccccccccccccccccceEecccccccccccc---CccCCCCCcccCChh
Confidence 7999999999765543 234578999999999
Q ss_pred ccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCCh------HHHHHHhhcccc----------------------------
Q 003963 678 LRNEPSDEKSDVYSFGVILWELATEKIPWDNLNS------MQVIGAVGFMNQ---------------------------- 723 (783)
Q Consensus 678 ~~~~~~s~~sDIwSLG~il~elltG~~Pf~~~~~------~~~~~~i~~~~~---------------------------- 723 (783)
+.+..++.++|||||||+||+|++|..||...+. ...+..+.....
T Consensus 265 ~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 344 (397)
T 1wak_A 265 LIGSGYNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVAGKYSKEFFTKKGDLKHITK 344 (397)
T ss_dssp HHTSCCCTHHHHHHHHHHHHHHHHSSCSCCCCCCSSSCHHHHHHHHHHHHHCSCCHHHHHHCTTGGGTBCTTSSBSSCCC
T ss_pred hcCCCCCcHHHHHHHHHHHHHHhhCCCCCCCCcccccCchHHHHHHHHHhcCCCChHHhhcccccccccCCccccccccc
Confidence 9999999999999999999999999999976542 111111110000
Q ss_pred ------------cccCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhc
Q 003963 724 ------------RLEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQA 770 (783)
Q Consensus 724 ------------~~~~~~~~s~~l~~LI~~cL~~dP~~RPsa~ell~~L~~L~~~~f~~ 770 (783)
....+...++.+.+||.+||..||.+|||+.++ |+|+||+.
T Consensus 345 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~------l~hp~~~~ 397 (397)
T 1wak_A 345 LKPWGLFEVLVEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAEC------LRHPWLNS 397 (397)
T ss_dssp CCCCCHHHHHHHTSCCCHHHHHHHHHHHGGGGCSSGGGSCCHHHH------HTSGGGGC
T ss_pred cCCcchhHhhhhhcccchhhHHHHHHHHHHHhccChhhcCCHHHH------hhCccccC
Confidence 001122334678999999999999999999999 78899963
No 225
>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}
Probab=100.00 E-value=9.8e-40 Score=351.45 Aligned_cols=259 Identities=22% Similarity=0.348 Sum_probs=207.2
Q ss_pred ccccceeEeeeeccCCcEEEEEEEEeC-CceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEeceee-------
Q 003963 502 ILWEDLTIGEQIGQGSCGTVYHAVWYG-SQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVT------- 573 (783)
Q Consensus 502 ~~~~~y~i~~~LG~G~fG~Vy~a~~~~-~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~------- 573 (783)
...++|++.++||+|+||.||+|.+.. ++.||||++... .....+.+.+|+.+++.++||||+++++++.
T Consensus 8 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~--~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~ 85 (320)
T 2i6l_A 8 DLGSRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLT--DPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLT 85 (320)
T ss_dssp EETTTEEEEEECC-----CEEEEEETTTTEEEEEEEEECC--SHHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCC
T ss_pred ccCCceeEEEEeccCCCeEEEEEEECCCCeEEEEEEEecC--ChHHHHHHHHHHHHHHhcCCCCeeEEEEeccccccccc
Confidence 345799999999999999999999875 578999998754 3455678899999999999999999998873
Q ss_pred -------cCCceEEEEEecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEc-CCCcE
Q 003963 574 -------SPQRLCIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVD-KHWTV 645 (783)
Q Consensus 574 -------~~~~~~lV~E~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~-~~~~v 645 (783)
....+|+||||++ ++|.+++.. .++++..++.++.||+.||+|||+++ |+||||||+|||++ .++.+
T Consensus 86 ~~~~~~~~~~~~~lv~e~~~-~~L~~~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~--i~H~dlkp~Nil~~~~~~~~ 160 (320)
T 2i6l_A 86 DDVGSLTELNSVYIVQEYME-TDLANVLEQ--GPLLEEHARLFMYQLLRGLKYIHSAN--VLHRDLKPANLFINTEDLVL 160 (320)
T ss_dssp C----CCSCSEEEEEEECCS-EEHHHHHTT--CCCCHHHHHHHHHHHHHHHHHHHHTT--CBCCCCSGGGEEEETTTTEE
T ss_pred cccccccccCceeEEeeccC-CCHHHHhhc--CCccHHHHHHHHHHHHHHHHHHHhCC--EecCCCCHHHEEEcCCCCeE
Confidence 3467899999997 599999975 45889999999999999999999998 99999999999997 56799
Q ss_pred EEEecCCCcccccccc---cccCCCCCCcccCcccccC-CCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhcc
Q 003963 646 KVGDFGLSRLKHETYL---TTKTGKGTPQWMAPEVLRN-EPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFM 721 (783)
Q Consensus 646 kL~DFGla~~~~~~~~---~~~~~~Gt~~Y~aPE~~~~-~~~s~~sDIwSLG~il~elltG~~Pf~~~~~~~~~~~i~~~ 721 (783)
||+|||++........ ......+++.|+|||++.+ ..++.++|||||||++|+|++|+.||...+.......+...
T Consensus 161 kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~ 240 (320)
T 2i6l_A 161 KIGDFGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQMQLILES 240 (320)
T ss_dssp EECCCTTCBCC--------CCCGGGSCCTTCCHHHHHCTTCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHH
T ss_pred EEccCccccccCCCcccccccccccccccccCcHHhcCcccCCchhhhHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHh
Confidence 9999999986543211 1223457899999998865 67899999999999999999999999988766554433211
Q ss_pred cc----------------------------cccCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhcCcC
Q 003963 722 NQ----------------------------RLEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQASRS 773 (783)
Q Consensus 722 ~~----------------------------~~~~~~~~s~~l~~LI~~cL~~dP~~RPsa~ell~~L~~L~~~~f~~~~~ 773 (783)
.. ....+..+++++.+||.+||..||.+|||+.++ ++|+||+...-
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~el------l~hp~~~~~~~ 314 (320)
T 2i6l_A 241 IPVVHEEDRQELLSVIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDRLTAEEA------LSHPYMSIYSF 314 (320)
T ss_dssp SCCCCHHHHHHHHTTSCHHHHHHTTSCCCCHHHHSTTCCHHHHHHHHTTSCSSGGGSCCHHHH------HTSHHHHTTCC
T ss_pred cCCCchhhhhhhhhcCcccccccccCCCCChhHhcchhhHHHHHHHHHHcCCCccccCCHHHH------hCCcccccccC
Confidence 10 011235689999999999999999999999999 78999986543
No 226
>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*
Probab=100.00 E-value=3.6e-40 Score=357.04 Aligned_cols=256 Identities=28% Similarity=0.452 Sum_probs=204.0
Q ss_pred cccceeEeeeeccCCcEEEEEEEEeC-CceEEEEEEecccCC------HHHHHHHHHHHHHHHhCCCCceeeEeceeecC
Q 003963 503 LWEDLTIGEQIGQGSCGTVYHAVWYG-SQDVAVKVFSRQEYS------DEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSP 575 (783)
Q Consensus 503 ~~~~y~i~~~LG~G~fG~Vy~a~~~~-~~~vAiK~i~~~~~~------~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~ 575 (783)
..++|++.+.||+|+||.||+|.+.. ++.||||++...... ......+.+|+.+++.++||||+++++++...
T Consensus 8 l~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~ 87 (322)
T 2ycf_A 8 LRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAE 87 (322)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEESS
T ss_pred hhhceeEeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEcCC
Confidence 45789999999999999999999865 467999998765321 12334578999999999999999999998765
Q ss_pred CceEEEEEecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCc---EEEEecCC
Q 003963 576 QRLCIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWT---VKVGDFGL 652 (783)
Q Consensus 576 ~~~~lV~E~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~---vkL~DFGl 652 (783)
. +|+||||+++++|.+++... ..+++..++.++.||+.||.|||+++ |+||||||+||||+.++. +||+|||+
T Consensus 88 ~-~~lv~e~~~~~~L~~~~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~--ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~ 163 (322)
T 2ycf_A 88 D-YYIVLELMEGGELFDKVVGN-KRLKEATCKLYFYQMLLAVQYLHENG--IIHRDLKPENVLLSSQEEDCLIKITDFGH 163 (322)
T ss_dssp S-EEEEEECCTTEETHHHHSTT-CCCCHHHHHHHHHHHHHHHHHHHHTT--EECCCCSGGGEEESSSSSSCCEEECCCTT
T ss_pred c-eEEEEecCCCCcHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHHCC--eeccCCCHHHEEEecCCCCCeEEEccCcc
Confidence 5 89999999999999998753 46899999999999999999999998 999999999999987654 99999999
Q ss_pred CcccccccccccCCCCCCcccCccccc---CCCCCchhHHHHHHHHHHHHHcCCCCCCCCChH-HHHHHhhcc--ccccc
Q 003963 653 SRLKHETYLTTKTGKGTPQWMAPEVLR---NEPSDEKSDVYSFGVILWELATEKIPWDNLNSM-QVIGAVGFM--NQRLE 726 (783)
Q Consensus 653 a~~~~~~~~~~~~~~Gt~~Y~aPE~~~---~~~~s~~sDIwSLG~il~elltG~~Pf~~~~~~-~~~~~i~~~--~~~~~ 726 (783)
+........ .....||+.|+|||++. ...++.++|||||||++|+|++|..||...... .....+... .....
T Consensus 164 ~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~ 242 (322)
T 2ycf_A 164 SKILGETSL-MRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPE 242 (322)
T ss_dssp CEECCCCHH-HHHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHHSSCSSCSTTCSSCHHHHHHHTCCCCCHH
T ss_pred ceecccccc-cccccCCcCccCchhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchHHHHHHHHHhCccccCch
Confidence 986654321 22346899999999974 566889999999999999999999999765432 122222111 11122
Q ss_pred CCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhh
Q 003963 727 IPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQ 769 (783)
Q Consensus 727 ~~~~~s~~l~~LI~~cL~~dP~~RPsa~ell~~L~~L~~~~f~ 769 (783)
.+..+++.+.+||.+||..||.+||++.++ ++|+||+
T Consensus 243 ~~~~~~~~~~~li~~~l~~dP~~Rps~~~~------l~h~~~~ 279 (322)
T 2ycf_A 243 VWAEVSEKALDLVKKLLVVDPKARFTTEEA------LRHPWLQ 279 (322)
T ss_dssp HHTTSCHHHHHHHHHHSCSSTTTSCCHHHH------HTSGGGC
T ss_pred hhhhcCHHHHHHHHHHcccCHhhCCCHHHH------hhCcCcC
Confidence 335689999999999999999999999999 4566663
No 227
>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*
Probab=100.00 E-value=3.1e-39 Score=383.01 Aligned_cols=264 Identities=33% Similarity=0.591 Sum_probs=225.5
Q ss_pred ccccccccceeEeeeeccCCcEEEEEEEEeCC----ceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEeceee
Q 003963 498 LDYEILWEDLTIGEQIGQGSCGTVYHAVWYGS----QDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVT 573 (783)
Q Consensus 498 ~~~e~~~~~y~i~~~LG~G~fG~Vy~a~~~~~----~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~ 573 (783)
..+++..++|++.+.||+|+||.||+|.+... ..||||++.... .....+.+.+|+.+++.++|||||++++++.
T Consensus 383 ~~~~i~~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~ 461 (656)
T 2j0j_A 383 RDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCT-SDSVREKFLQEALTMRQFDHPHIVKLIGVIT 461 (656)
T ss_dssp GGTBCCGGGEEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTT-CHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC
T ss_pred cccccccccEEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccC-CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEe
Confidence 35567778999999999999999999998542 358999876533 4556678999999999999999999999985
Q ss_pred cCCceEEEEEecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCC
Q 003963 574 SPQRLCIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLS 653 (783)
Q Consensus 574 ~~~~~~lV~E~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla 653 (783)
++.+|+||||+++|+|.+++......+++..++.++.||+.||.|||+++ |+||||||+|||++.++.+||+|||++
T Consensus 462 -~~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~g--ivHrDikp~NILl~~~~~vkL~DFG~a 538 (656)
T 2j0j_A 462 -ENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESKR--FVHRDIAARNVLVSSNDCVKLGDFGLS 538 (656)
T ss_dssp -SSSCEEEEECCTTCBHHHHHHHTTTTCCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCSGGGEEEEETTEEEECCCCCC
T ss_pred -cCceEEEEEcCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCC--ccccccchHhEEEeCCCCEEEEecCCC
Confidence 46789999999999999999877667999999999999999999999998 999999999999999999999999999
Q ss_pred cccccccc-cccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCChHHHHHHhhcccccccCCCCC
Q 003963 654 RLKHETYL-TTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELAT-EKIPWDNLNSMQVIGAVGFMNQRLEIPKDV 731 (783)
Q Consensus 654 ~~~~~~~~-~~~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~ 731 (783)
+....... ......+|+.|+|||++.+..++.++|||||||++|||++ |..||......+....+.. .....++..+
T Consensus 539 ~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~~~~~~i~~-~~~~~~~~~~ 617 (656)
T 2j0j_A 539 RYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIEN-GERLPMPPNC 617 (656)
T ss_dssp CSCCC----------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHH-TCCCCCCTTC
T ss_pred eecCCCcceeccCCCCCcceeCHHHhcCCCCCchhhHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHc-CCCCCCCccc
Confidence 86544321 2223457889999999999999999999999999999997 9999999888777666542 3355678889
Q ss_pred CHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHH
Q 003963 732 DPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQ 766 (783)
Q Consensus 732 s~~l~~LI~~cL~~dP~~RPsa~ell~~L~~L~~~ 766 (783)
++.+.+||.+||..||.+||++.++++.|+++...
T Consensus 618 ~~~l~~li~~~l~~dP~~RPs~~el~~~L~~il~~ 652 (656)
T 2j0j_A 618 PPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILEE 652 (656)
T ss_dssp CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999988654
No 228
>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*
Probab=100.00 E-value=7.2e-40 Score=351.53 Aligned_cols=254 Identities=31% Similarity=0.522 Sum_probs=207.3
Q ss_pred eeEeeeeccCCcEEEEEEEEeCCceEEEEEEeccc--CCHHHHHHHHHHHHHHHhCCCCceeeEeceeecCCceEEEEEe
Q 003963 507 LTIGEQIGQGSCGTVYHAVWYGSQDVAVKVFSRQE--YSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIVTEF 584 (783)
Q Consensus 507 y~i~~~LG~G~fG~Vy~a~~~~~~~vAiK~i~~~~--~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lV~E~ 584 (783)
|..+++||+|+||.||+|.+ .++.||||++.... ......+.+.+|+.+++.++||||+++++++...+..++||||
T Consensus 33 ~~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 111 (307)
T 2nru_A 33 SVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVY 111 (307)
T ss_dssp TTTCCEEEECSSEEEEEEES-SSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEEC
T ss_pred cccCCccccCCCeEEEEEEE-CCceEEEEEEecccCcchHHHHHHHHHHHHHHHhcCCCCeEEEEEEEecCCceEEEEEe
Confidence 44558999999999999986 46789999987543 2234567889999999999999999999999999999999999
Q ss_pred cCCCCHHHHHhhc--CCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCccccccc--
Q 003963 585 LPRGSLFRLLQRN--TTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETY-- 660 (783)
Q Consensus 585 ~~ggsL~~~L~~~--~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~-- 660 (783)
+++++|.+++... ...+++..++.++.||+.||.|||+++ |+||||||+|||++.++.+||+|||++.......
T Consensus 112 ~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~--i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~ 189 (307)
T 2nru_A 112 MPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENH--HIHRDIKSANILLDEAFTAKISDFGLARASEKFAQT 189 (307)
T ss_dssp CTTCBHHHHHHTGGGCCCCCHHHHHHHHHHHHHHHHHHHHTT--EECSCCCGGGEEECTTCCEEECCCTTCEECCSCSSC
T ss_pred cCCCcHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhcCC--eecCCCCHHHEEEcCCCcEEEeeccccccccccccc
Confidence 9999999999643 345899999999999999999999998 9999999999999999999999999987654322
Q ss_pred ccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHH----HHHhhccc---------ccccC
Q 003963 661 LTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQV----IGAVGFMN---------QRLEI 727 (783)
Q Consensus 661 ~~~~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~elltG~~Pf~~~~~~~~----~~~i~~~~---------~~~~~ 727 (783)
.......||+.|+|||++.+. ++.++|||||||++|+|++|..||........ ...+.... .....
T Consensus 190 ~~~~~~~g~~~y~aPE~~~~~-~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (307)
T 2nru_A 190 VMTSRIVGTTAYMAPEALRGE-ITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDIKEEIEDEEKTIEDYIDKKMNDA 268 (307)
T ss_dssp EECSSCCSCGGGCCHHHHTTE-ECTHHHHHHHHHHHHHHHHCCCSBCTTBSSSBTTHHHHHHHTTSCCHHHHSCSSCSCC
T ss_pred ccccccCCCcCcCChHHhcCC-CCccchhHHHHHHHHHHHHCCCCcccCcchHHHHHHHHHhhhhhhhhhhhcccccccc
Confidence 122345789999999998764 78999999999999999999999976543221 11111000 01112
Q ss_pred CCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHH
Q 003963 728 PKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQ 764 (783)
Q Consensus 728 ~~~~s~~l~~LI~~cL~~dP~~RPsa~ell~~L~~L~ 764 (783)
+..++..+.++|.+||..||.+||++.++++.|+++.
T Consensus 269 ~~~~~~~l~~li~~cl~~~p~~Rps~~~l~~~L~~l~ 305 (307)
T 2nru_A 269 DSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEMT 305 (307)
T ss_dssp CHHHHHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHC
T ss_pred chHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHh
Confidence 2334567999999999999999999999999998874
No 229
>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A
Probab=100.00 E-value=1.1e-39 Score=348.01 Aligned_cols=254 Identities=26% Similarity=0.411 Sum_probs=204.0
Q ss_pred ccceeEeeeeccCCcEEEEEEEEe-CCceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEeceeec--------
Q 003963 504 WEDLTIGEQIGQGSCGTVYHAVWY-GSQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTS-------- 574 (783)
Q Consensus 504 ~~~y~i~~~LG~G~fG~Vy~a~~~-~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~-------- 574 (783)
.++|++.+.||+|+||.||+|.+. .++.||||++... ......+.+|+.+++.++||||+++++++..
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~ 81 (303)
T 1zy4_A 5 ASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHT---EEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPM 81 (303)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEEE---HHHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC--
T ss_pred cccchhhheeccCCcEEEEEEEEcCCCeEEEEEEEecc---HHHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhhhh
Confidence 368999999999999999999985 4578999998653 3456788899999999999999999998754
Q ss_pred -----CCceEEEEEecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEe
Q 003963 575 -----PQRLCIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGD 649 (783)
Q Consensus 575 -----~~~~~lV~E~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~D 649 (783)
...+|+||||+++++|.+++......+++..++.++.||+.||.|||+++ |+|+||||+|||++.++.+||+|
T Consensus 82 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~--i~H~dlkp~Nil~~~~~~~kl~d 159 (303)
T 1zy4_A 82 TAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRLFRQILEALSYIHSQG--IIHRDLKPMNIFIDESRNVKIGD 159 (303)
T ss_dssp ----CEEEEEEEEECCCSCBHHHHHHHSCGGGCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCCGGGEEECTTSCEEECC
T ss_pred cccccCCceEEEEecCCCCCHHHhhhccccccchHHHHHHHHHHHHHHHHHHhCC--eecccCCHHhEEEcCCCCEEEee
Confidence 35689999999999999999877777889999999999999999999998 99999999999999999999999
Q ss_pred cCCCccccccc--------------ccccCCCCCCcccCcccccCC-CCCchhHHHHHHHHHHHHHcCCCCCCCC-ChHH
Q 003963 650 FGLSRLKHETY--------------LTTKTGKGTPQWMAPEVLRNE-PSDEKSDVYSFGVILWELATEKIPWDNL-NSMQ 713 (783)
Q Consensus 650 FGla~~~~~~~--------------~~~~~~~Gt~~Y~aPE~~~~~-~~s~~sDIwSLG~il~elltG~~Pf~~~-~~~~ 713 (783)
||++....... .......|++.|+|||++.+. .++.++|||||||++|+|++ ||... ....
T Consensus 160 fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~---p~~~~~~~~~ 236 (303)
T 1zy4_A 160 FGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY---PFSTGMERVN 236 (303)
T ss_dssp CCCCSCTTC-------------------------CTTSCHHHHTSCSCCCTHHHHHHHHHHHHHHHS---CCSSHHHHHH
T ss_pred CcchhhcccccchhccccccccccccccccCCCcccccCcccccCCCCCcchhhHHHHHHHHHHHHh---ccCCchhHHH
Confidence 99987654221 122345689999999999865 68999999999999999998 55432 2223
Q ss_pred HHHHhhccc--ccccCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhcC
Q 003963 714 VIGAVGFMN--QRLEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQAS 771 (783)
Q Consensus 714 ~~~~i~~~~--~~~~~~~~~s~~l~~LI~~cL~~dP~~RPsa~ell~~L~~L~~~~f~~~ 771 (783)
....+.... ....++...++.+.+||.+||..||.+|||+.++ ++|+||+..
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~l------l~h~~~~~~ 290 (303)
T 1zy4_A 237 ILKKLRSVSIEFPPDFDDNKMKVEKKIIRLLIDHDPNKRPGARTL------LNSGWLPVK 290 (303)
T ss_dssp HHHHHHSTTCCCCTTCCTTTSHHHHHHHHHHTCSSGGGSCCHHHH------HHSSCSCCC
T ss_pred HHHhccccccccCccccccchHHHHHHHHHHHhcCcccCcCHHHH------hCCCCcCCC
Confidence 333332211 1233455677889999999999999999999999 678998653
No 230
>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}
Probab=100.00 E-value=5.4e-40 Score=366.86 Aligned_cols=261 Identities=19% Similarity=0.352 Sum_probs=210.4
Q ss_pred ccccceeEeeeeccCCcEEEEEEEEeC-CceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEeceeecCC--ce
Q 003963 502 ILWEDLTIGEQIGQGSCGTVYHAVWYG-SQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQ--RL 578 (783)
Q Consensus 502 ~~~~~y~i~~~LG~G~fG~Vy~a~~~~-~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~--~~ 578 (783)
...++|++.++||+|+||.||+|.+.. ++.||||++...... .....+.+|+.+++.++||||+++++++.... ..
T Consensus 6 ~~~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~ 84 (396)
T 4eut_A 6 TSNHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFL-RPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHK 84 (396)
T ss_dssp CSSEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGG-SCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCE
T ss_pred CCCCceEEEEEEEcCCCeEEEEEEECCCCcEEEEEEecccccc-chHHHHHHHHHHHHhcCCCCCCeEEEeeccCCCCee
Confidence 345789999999999999999999875 578999999764422 22456778999999999999999999998655 78
Q ss_pred EEEEEecCCCCHHHHHhhcCC--cchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEE----cCCCcEEEEecCC
Q 003963 579 CIVTEFLPRGSLFRLLQRNTT--KLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLV----DKHWTVKVGDFGL 652 (783)
Q Consensus 579 ~lV~E~~~ggsL~~~L~~~~~--~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl----~~~~~vkL~DFGl 652 (783)
|+|||||++++|.+++..... .+++..++.++.||+.||+|||+++ |+||||||+|||| +.++.+||+|||+
T Consensus 85 ~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~--ivH~Dlkp~NIll~~~~~~~~~~kL~DFG~ 162 (396)
T 4eut_A 85 VLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENG--IVHRNIKPGNIMRVIGEDGQSVYKLTDFGA 162 (396)
T ss_dssp EEEECCCTTEEHHHHTTSGGGTTCCCHHHHHHHHHHHHHHHHHHHHTT--EECCCCCGGGEEEEECTTSCEEEEECCGGG
T ss_pred EEEEecCCCCCHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHHCC--EEECCcCHHHEEEeecCCCceeEEEecCCC
Confidence 999999999999999975432 3899999999999999999999998 9999999999999 7788899999999
Q ss_pred CcccccccccccCCCCCCcccCcccccC--------CCCCchhHHHHHHHHHHHHHcCCCCCCCCC----hHHHHHHhhc
Q 003963 653 SRLKHETYLTTKTGKGTPQWMAPEVLRN--------EPSDEKSDVYSFGVILWELATEKIPWDNLN----SMQVIGAVGF 720 (783)
Q Consensus 653 a~~~~~~~~~~~~~~Gt~~Y~aPE~~~~--------~~~s~~sDIwSLG~il~elltG~~Pf~~~~----~~~~~~~i~~ 720 (783)
++...... ......||+.|+|||++.+ ..++.++|||||||++|+|++|..||.... .......+..
T Consensus 163 a~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~ 241 (396)
T 4eut_A 163 ARELEDDE-QFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIIT 241 (396)
T ss_dssp CEECCCGG-GSSCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHSSCSEECTTCTTTCHHHHHHHHH
T ss_pred ceEccCCC-ccccccCCccccCHHHhhccccccccccCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcccchHHHHHHHhc
Confidence 98665432 2335579999999999875 456789999999999999999999996432 2223322211
Q ss_pred ccc-------------------ccc----CCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHH
Q 003963 721 MNQ-------------------RLE----IPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQ 766 (783)
Q Consensus 721 ~~~-------------------~~~----~~~~~s~~l~~LI~~cL~~dP~~RPsa~ell~~L~~L~~~ 766 (783)
... ..+ ++..+++.+.+||.+||..||.+||++.++++.++++.+.
T Consensus 242 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ll~~~L~~dP~~R~s~~e~l~~l~~il~~ 310 (396)
T 4eut_A 242 GKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDILHR 310 (396)
T ss_dssp SCCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHHHTC
T ss_pred CCCcccchhheeccCCCcccCccCCcccccchHHHhhchHHHHHhhccChhhhccHHHHHHHHHHHhhc
Confidence 110 011 1123456789999999999999999999999999887654
No 231
>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}
Probab=100.00 E-value=1.8e-39 Score=356.42 Aligned_cols=261 Identities=20% Similarity=0.230 Sum_probs=200.3
Q ss_pred cccccceeEeeeeccCCcEEEEEEEEeC-CceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEeceeecCCc--
Q 003963 501 EILWEDLTIGEQIGQGSCGTVYHAVWYG-SQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQR-- 577 (783)
Q Consensus 501 e~~~~~y~i~~~LG~G~fG~Vy~a~~~~-~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~-- 577 (783)
....++|++.++||+|+||.||+|.+.. ++.||||++....... ..+.+++..+..++||||+++++++.....
T Consensus 19 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~---~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~ 95 (360)
T 3e3p_A 19 RKEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPRFR---NRELQIMQDLAVLHHPNIVQLQSYFYTLGERD 95 (360)
T ss_dssp HHHHTTEEEC----------CEEEEETTTCCEEEEEEEECCTTCC---CHHHHHHHHHHHHCCTTBCCEEEEEEEECSSC
T ss_pred hhhccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEecCcccc---HHHHHHHHHHHhcCCCCcccHHHhhhcccccc
Confidence 3456899999999999999999999864 5789999986643322 245567888889999999999999865433
Q ss_pred -----eEEEEEecCCCCHHHHHh---hcCCcchHHHHHHHHHHHHHHHHHHH--hCCCCEEecCCCCCCEEEcC-CCcEE
Q 003963 578 -----LCIVTEFLPRGSLFRLLQ---RNTTKLDWRRRILMALDIARGVSYLH--HCNPPIIHRDLKSSNLLVDK-HWTVK 646 (783)
Q Consensus 578 -----~~lV~E~~~ggsL~~~L~---~~~~~l~~~~~~~i~~qi~~aL~~LH--~~~~~IvHrDIKp~NILl~~-~~~vk 646 (783)
+++||||+++ +|...+. .....+++..++.++.||+.||.||| +++ |+||||||+||||+. ++.+|
T Consensus 96 ~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~~--ivH~Dlkp~NIll~~~~~~~k 172 (360)
T 3e3p_A 96 RRDIYLNVVMEYVPD-TLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLPSVN--VCHRDIKPHNVLVNEADGTLK 172 (360)
T ss_dssp TTCEEEEEEEECCSC-BHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHTSTTTC--CBCSCCCGGGEEEETTTTEEE
T ss_pred ccceeEEEEeecccc-cHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhCCCCC--eecCcCCHHHEEEeCCCCcEE
Confidence 7899999976 6655543 23556889999999999999999999 877 999999999999996 89999
Q ss_pred EEecCCCcccccccccccCCCCCCcccCcccccCCC-CCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhcccc--
Q 003963 647 VGDFGLSRLKHETYLTTKTGKGTPQWMAPEVLRNEP-SDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQ-- 723 (783)
Q Consensus 647 L~DFGla~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~-~s~~sDIwSLG~il~elltG~~Pf~~~~~~~~~~~i~~~~~-- 723 (783)
|+|||++....... ......||+.|+|||++.+.. ++.++|||||||++|+|++|+.||...+....+..+.....
T Consensus 173 l~Dfg~a~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~ 251 (360)
T 3e3p_A 173 LCDFGSAKKLSPSE-PNVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQLHEIVRVLGCP 251 (360)
T ss_dssp ECCCTTCBCCCTTS-CCCSTTSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCC
T ss_pred EeeCCCceecCCCC-CcccccCCcceeCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCcCCCChHHHHHHHHHHcCCC
Confidence 99999998665432 233557899999999987655 79999999999999999999999998877665544421100
Q ss_pred ----------------------------cccCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhcCcCC
Q 003963 724 ----------------------------RLEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQASRST 774 (783)
Q Consensus 724 ----------------------------~~~~~~~~s~~l~~LI~~cL~~dP~~RPsa~ell~~L~~L~~~~f~~~~~~ 774 (783)
....+..+++++.+||.+||+.||.+|||+.++ |+|+||+.....
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~------l~hp~f~~~~~~ 324 (360)
T 3e3p_A 252 SREVLRKLNPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEA------LCHPYFDELHDP 324 (360)
T ss_dssp CHHHHHHHCTTCCCGGGGCCCCCCHHHHTTTCCCTTHHHHHHHHHHHTCSSGGGSCCHHHH------TTSGGGGGGGCT
T ss_pred CHHHHHhcccchhhccccccccCCcccccchhhccccHHHHHHHHHHhccCccccCCHHHH------hcCccccccCCc
Confidence 011223367899999999999999999999999 789999887654
No 232
>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}
Probab=100.00 E-value=3.2e-39 Score=369.25 Aligned_cols=257 Identities=20% Similarity=0.307 Sum_probs=213.9
Q ss_pred cccceeEeeeeccCCcEEEEEEEEeC-CceEEEEEEecccCCHHHHHHHHHHHHHHHhCCC-CceeeEeceeecCCceEE
Q 003963 503 LWEDLTIGEQIGQGSCGTVYHAVWYG-SQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRH-PNVLLFMGAVTSPQRLCI 580 (783)
Q Consensus 503 ~~~~y~i~~~LG~G~fG~Vy~a~~~~-~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~H-pnIv~l~~~~~~~~~~~l 580 (783)
..++|+++++||+|+||.||+|.+.. ++.||||++....... .+.+|+.+++.|.| ++|+.+..++......||
T Consensus 5 i~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~~~----~~~~E~~il~~L~~~~~i~~i~~~~~~~~~~~l 80 (483)
T 3sv0_A 5 VGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKHP----QLLYESKIYRILQGGTGIPNVRWFGVEGDYNVL 80 (483)
T ss_dssp ETTTEECCCCCEECSSCEEEEEEETTTCCEEEEEEEETTCSSC----CHHHHHHHHHHTTTSTTCCCEEEEEEETTEEEE
T ss_pred cCCcEEEEEEEeeCCCEEEEEEEECCCCcEEEEEEeccccccH----HHHHHHHHHHHhcCCCCCCeEEEEEeeCCEEEE
Confidence 45789999999999999999999854 5789999987654332 46789999999987 566666667777888999
Q ss_pred EEEecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEE---cCCCcEEEEecCCCcccc
Q 003963 581 VTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLV---DKHWTVKVGDFGLSRLKH 657 (783)
Q Consensus 581 V~E~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl---~~~~~vkL~DFGla~~~~ 657 (783)
||||+ +++|.+++......+++..++.++.||+.||.|||+++ ||||||||+|||| +.++.+||+|||+++...
T Consensus 81 vme~~-g~sL~~ll~~~~~~l~~~~~~~i~~qi~~aL~yLH~~g--IvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~ 157 (483)
T 3sv0_A 81 VMDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKS--FLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYR 157 (483)
T ss_dssp EEECC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTT--EECCCCCGGGEEECCGGGTTCEEECCCTTCEECB
T ss_pred EEECC-CCCHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCC--EeecccCcceEEEecCCCCCeEEEEeCCcceecc
Confidence 99999 88999999876778999999999999999999999998 9999999999999 688999999999998655
Q ss_pred cccc-------cccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCCh---HHHHHHhhcc---ccc
Q 003963 658 ETYL-------TTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNS---MQVIGAVGFM---NQR 724 (783)
Q Consensus 658 ~~~~-------~~~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~elltG~~Pf~~~~~---~~~~~~i~~~---~~~ 724 (783)
.... ......||+.|+|||++.+..++.++|||||||+||+|++|+.||..... ...+..+... ...
T Consensus 158 ~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~ 237 (483)
T 3sv0_A 158 DTSTHQHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVATSI 237 (483)
T ss_dssp CTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSHHHHHHHHHHHHHHSCH
T ss_pred CCccccccccccccccCCCccccCHHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccchhHHHHHHHHhhccccccH
Confidence 4321 22356799999999999999999999999999999999999999987544 2222222111 112
Q ss_pred ccCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHH
Q 003963 725 LEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQ 766 (783)
Q Consensus 725 ~~~~~~~s~~l~~LI~~cL~~dP~~RPsa~ell~~L~~L~~~ 766 (783)
..++..+++++.+||..||..+|.+||++.+|++.|+.+...
T Consensus 238 ~~l~~~~p~~l~~li~~cl~~dP~~RPs~~el~~~L~~l~~~ 279 (483)
T 3sv0_A 238 EALCRGYPTEFASYFHYCRSLRFDDKPDYSYLKRLFRDLFIR 279 (483)
T ss_dssp HHHHTTSCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHH
T ss_pred HHHhcCCcHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHH
Confidence 233467899999999999999999999999999999888654
No 233
>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*
Probab=100.00 E-value=2.4e-39 Score=352.67 Aligned_cols=256 Identities=32% Similarity=0.543 Sum_probs=209.6
Q ss_pred cccccceeEeeeeccCCcEEEEEEEEeCCceEEEEEEecccCCHHHHHHHHHHHHHHHh--CCCCceeeEeceeecCC--
Q 003963 501 EILWEDLTIGEQIGQGSCGTVYHAVWYGSQDVAVKVFSRQEYSDEVIHSFRQEVSLMKR--LRHPNVLLFMGAVTSPQ-- 576 (783)
Q Consensus 501 e~~~~~y~i~~~LG~G~fG~Vy~a~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~--l~HpnIv~l~~~~~~~~-- 576 (783)
....++|++.+.||+|+||.||++.+. ++.||||++.... ...+.+|++++.. ++||||+++++++....
T Consensus 38 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~vavK~~~~~~-----~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~~~~~ 111 (342)
T 1b6c_B 38 RTIARTIVLQESIGKGRFGEVWRGKWR-GEEVAVKIFSSRE-----ERSWFREAEIYQTVMLRHENILGFIAADNKDNGT 111 (342)
T ss_dssp HHHHHHCEEEEEEEEETTEEEEEEEET-TEEEEEEEECGGG-----HHHHHHHHHHHHHSCCCCTTBCCEEEEEECCCSS
T ss_pred ccccccEEEEeeecCCCCcEEEEEEEc-CccEEEEEeCchh-----HHHHHHHHHHHHHhhcCCCcEEEEEeeecccCCc
Confidence 455689999999999999999999874 6789999986532 2466789999988 78999999999998776
Q ss_pred --ceEEEEEecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHH--------hCCCCEEecCCCCCCEEEcCCCcEE
Q 003963 577 --RLCIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLH--------HCNPPIIHRDLKSSNLLVDKHWTVK 646 (783)
Q Consensus 577 --~~~lV~E~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH--------~~~~~IvHrDIKp~NILl~~~~~vk 646 (783)
.+++||||+++++|.+++... .+++..++.++.||+.||.||| +.+ |+||||||+||||+.++.+|
T Consensus 112 ~~~~~lv~e~~~~g~L~~~l~~~--~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~--ivH~Dlkp~NIll~~~~~~k 187 (342)
T 1b6c_B 112 WTQLWLVSDYHEHGSLFDYLNRY--TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPA--IAHRDLKSKNILVKKNGTCC 187 (342)
T ss_dssp CCCEEEEECCCTTCBHHHHHHHC--CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCE--EECSCCSGGGEEECTTSCEE
T ss_pred cceeEEEEeecCCCcHHHHHhcc--CccHHHHHHHHHHHHHHHHHHHHHHhhhcccCC--eeeCCCCHHHEEECCCCCEE
Confidence 789999999999999999764 5899999999999999999999 777 99999999999999999999
Q ss_pred EEecCCCcccccccc----cccCCCCCCcccCcccccCCCC------CchhHHHHHHHHHHHHHcC----------CCCC
Q 003963 647 VGDFGLSRLKHETYL----TTKTGKGTPQWMAPEVLRNEPS------DEKSDVYSFGVILWELATE----------KIPW 706 (783)
Q Consensus 647 L~DFGla~~~~~~~~----~~~~~~Gt~~Y~aPE~~~~~~~------s~~sDIwSLG~il~elltG----------~~Pf 706 (783)
|+|||++........ ......||+.|+|||++.+... +.++|||||||++|+|++| ..||
T Consensus 188 L~Dfg~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~p~ 267 (342)
T 1b6c_B 188 IADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPY 267 (342)
T ss_dssp ECCCTTCEEEETTTTEEEECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTT
T ss_pred EEECCCceeccccccccccccccCCcCcccCCHhhhcccccccccccCCcccHHHHHHHHHHHHhccCcCCcccccccCc
Confidence 999999976544321 2234579999999999987632 3689999999999999999 7898
Q ss_pred CCCC-----hHHHHHHhhcccccccCCC-----CCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHH
Q 003963 707 DNLN-----SMQVIGAVGFMNQRLEIPK-----DVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQ 766 (783)
Q Consensus 707 ~~~~-----~~~~~~~i~~~~~~~~~~~-----~~s~~l~~LI~~cL~~dP~~RPsa~ell~~L~~L~~~ 766 (783)
.... .......+........++. .+++.+.+||.+||..||.+|||+.+++++|+++..+
T Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~~i~~~ 337 (342)
T 1b6c_B 268 YDLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQ 337 (342)
T ss_dssp TTTSCSSCCHHHHHHHHTTSCCCCCCCGGGGTSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred cccCcCcccHHHHHHHHHHHHhCCCCcccccchhHHHHHHHHHHHHhccChhhCCCHHHHHHHHHHHHHH
Confidence 7653 2233333322222333332 2346799999999999999999999999999988764
No 234
>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*
Probab=100.00 E-value=1.4e-39 Score=352.87 Aligned_cols=261 Identities=26% Similarity=0.414 Sum_probs=190.6
Q ss_pred ccccccccceeEeeeeccCCcEEEEEEEEe-CCceEEEEEEecccCCHHHHHHHHHHHH-HHHhCCCCceeeEeceeecC
Q 003963 498 LDYEILWEDLTIGEQIGQGSCGTVYHAVWY-GSQDVAVKVFSRQEYSDEVIHSFRQEVS-LMKRLRHPNVLLFMGAVTSP 575 (783)
Q Consensus 498 ~~~e~~~~~y~i~~~LG~G~fG~Vy~a~~~-~~~~vAiK~i~~~~~~~~~~~~~~~Ei~-il~~l~HpnIv~l~~~~~~~ 575 (783)
..+++..++|++.+.||+|+||.||+|.+. .++.||||++..... ......+..|+. +++.++||||+++++++...
T Consensus 15 ~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~~ 93 (327)
T 3aln_A 15 QHWDFTAEDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVD-EKEQKQLLMDLDVVMRSSDCPYIVQFYGALFRE 93 (327)
T ss_dssp EEECCCSCSEEC-CEEEECSSEEEEEEEETTTTEEEEEEEEECCCC-HHHHHHHHHHHHHHHSSCCCTTBCCEEEEEECS
T ss_pred HhcccCHHHhhehheeccCCCEEEEEEEEcCCCCEEEEEEeecccC-chHHHHHHHHHHHHHHcCCCCcEeeeeeEEEeC
Confidence 455667789999999999999999999986 457899999976543 333345555655 77778999999999999999
Q ss_pred CceEEEEEecCCCCHHHHHhh----cCCcchHHHHHHHHHHHHHHHHHHHhC-CCCEEecCCCCCCEEEcCCCcEEEEec
Q 003963 576 QRLCIVTEFLPRGSLFRLLQR----NTTKLDWRRRILMALDIARGVSYLHHC-NPPIIHRDLKSSNLLVDKHWTVKVGDF 650 (783)
Q Consensus 576 ~~~~lV~E~~~ggsL~~~L~~----~~~~l~~~~~~~i~~qi~~aL~~LH~~-~~~IvHrDIKp~NILl~~~~~vkL~DF 650 (783)
+..++||||+++ +|.+++.. ....+++..++.++.|++.||.|||+. + |+||||||+||||+.++.+||+||
T Consensus 94 ~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~--ivH~dlkp~NIll~~~~~~kl~Df 170 (327)
T 3aln_A 94 GDCWICMELMST-SFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKENLK--IIHRDIKPSNILLDRSGNIKLCDF 170 (327)
T ss_dssp SEEEEEECCCSE-EHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHHHS--CCCSCCCGGGEEEETTTEEEECCC
T ss_pred CceEEEEeecCC-ChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHhccCC--EeECCCCHHHEEEcCCCCEEEccC
Confidence 999999999975 88887753 245689999999999999999999998 8 999999999999999999999999
Q ss_pred CCCcccccccccccCCCCCCcccCcccc----cCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHH-HHHHhhcccccc
Q 003963 651 GLSRLKHETYLTTKTGKGTPQWMAPEVL----RNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQ-VIGAVGFMNQRL 725 (783)
Q Consensus 651 Gla~~~~~~~~~~~~~~Gt~~Y~aPE~~----~~~~~s~~sDIwSLG~il~elltG~~Pf~~~~~~~-~~~~i~~~~~~~ 725 (783)
|++........ .....||+.|+|||++ .+..++.++|||||||++|+|++|..||....... ....+. .....
T Consensus 171 g~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~-~~~~~ 248 (327)
T 3aln_A 171 GISGQLVDSIA-KTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVFDQLTQVV-KGDPP 248 (327)
T ss_dssp SSSCC-------------------------------CCSHHHHHHHHHHHHHHHHSCCCSSCC-------CCCC-CSCCC
T ss_pred CCceecccccc-cccCCCCccccCceeeccccCcCCCCchhhHHHHHHHHHHHHHCCCCCCCcchHHHHHHHHh-cCCCC
Confidence 99976554322 2234689999999998 46668999999999999999999999998754321 111111 11111
Q ss_pred cC----CCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhc
Q 003963 726 EI----PKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQA 770 (783)
Q Consensus 726 ~~----~~~~s~~l~~LI~~cL~~dP~~RPsa~ell~~L~~L~~~~f~~ 770 (783)
.+ ...+++.+.+||.+||..||.+||++.++ ++|+||+.
T Consensus 249 ~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~el------l~hp~~~~ 291 (327)
T 3aln_A 249 QLSNSEEREFSPSFINFVNLCLTKDESKRPKYKEL------LKHPFILM 291 (327)
T ss_dssp CCCCCSSCCCCHHHHHHHHHHTCSSGGGSCCHHHH------TTSHHHHH
T ss_pred CCCCcccccCCHHHHHHHHHHhhCChhhCcCHHHH------HhChHHHH
Confidence 22 24689999999999999999999999999 56777754
No 235
>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*
Probab=100.00 E-value=3.1e-39 Score=358.75 Aligned_cols=259 Identities=24% Similarity=0.314 Sum_probs=210.1
Q ss_pred cccccceeEeeeeccCCcEEEEEEEEeC-CceEEEEEEecccCCHHHHHHHHHHHHHHHhCC-CC-----ceeeEeceee
Q 003963 501 EILWEDLTIGEQIGQGSCGTVYHAVWYG-SQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLR-HP-----NVLLFMGAVT 573 (783)
Q Consensus 501 e~~~~~y~i~~~LG~G~fG~Vy~a~~~~-~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~-Hp-----nIv~l~~~~~ 573 (783)
+...++|++.++||+|+||.||+|.+.. ++.||||++... ......+..|+.+++.+. |+ +|+++++++.
T Consensus 50 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~ 126 (382)
T 2vx3_A 50 EKWMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNK---KAFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFM 126 (382)
T ss_dssp CEETTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSS---HHHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEE
T ss_pred CEeeeeEEEEEEEeecCCEEEEEEEEcCCCcEEEEEEEecc---HHHHHHHHHHHHHHHHHHhcccccceeEEEeeeeec
Confidence 4456899999999999999999999865 467999998643 344567788999988885 44 4999999999
Q ss_pred cCCceEEEEEecCCCCHHHHHhhcC-CcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEc--CCCcEEEEec
Q 003963 574 SPQRLCIVTEFLPRGSLFRLLQRNT-TKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVD--KHWTVKVGDF 650 (783)
Q Consensus 574 ~~~~~~lV~E~~~ggsL~~~L~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~--~~~~vkL~DF 650 (783)
..+.+|+||||++ ++|.+++.... ..+++..++.++.||+.||.|||.+..+||||||||+||||+ .++.+||+||
T Consensus 127 ~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~~~ivHrDlkp~NIll~~~~~~~~kL~DF 205 (382)
T 2vx3_A 127 FRNHLCLVFEMLS-YNLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLATPELSIIHCDLKPENILLCNPKRSAIKIVDF 205 (382)
T ss_dssp ETTEEEEEEECCC-CBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHTSTTTCEECCCCSGGGEEESSTTSCCEEECCC
T ss_pred cCCceEEEEecCC-CCHHHHHhhcCcCCCCHHHHHHHHHHHHHHHHHhccCCCCEEcCCCCcccEEEecCCCCcEEEEec
Confidence 9999999999995 59999997653 458999999999999999999995333499999999999995 4788999999
Q ss_pred CCCcccccccccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhcccccc-----
Q 003963 651 GLSRLKHETYLTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRL----- 725 (783)
Q Consensus 651 Gla~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~elltG~~Pf~~~~~~~~~~~i~~~~~~~----- 725 (783)
|+++..... .....||+.|+|||++.+..++.++|||||||++|+|++|++||...+....+..+......+
T Consensus 206 G~a~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~ 282 (382)
T 2vx3_A 206 GSSCQLGQR---IYQYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGANEVDQMNKIVEVLGIPPAHIL 282 (382)
T ss_dssp TTCEETTCC---CCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHHH
T ss_pred cCceecccc---cccccCCccccChHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHH
Confidence 999866432 235678999999999999999999999999999999999999999887766554432211000
Q ss_pred -----------cCCC------------------C----------------------------CCHHHHHHHHHhhhhCCC
Q 003963 726 -----------EIPK------------------D----------------------------VDPRWAAIVESCWHSDPQ 748 (783)
Q Consensus 726 -----------~~~~------------------~----------------------------~s~~l~~LI~~cL~~dP~ 748 (783)
.++. . .++++.+||.+||+.||.
T Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~ 362 (382)
T 2vx3_A 283 DQAPKARKFFEKLPDGTWNLKKTKDGKREYKPPGTRKLHNILGVETGGPGGRRAGESGHTVADYLKFKDLILRMLDYDPK 362 (382)
T ss_dssp TTCTTHHHHEEECTTSCEEECCCCTTCCCSCCTTCSCHHHHHTTTTTSGGGTTTTCTTCCHHHHHHHHHHHHHHTCSCTT
T ss_pred HhhHHHHHHHHhccccccccccccccccccCCcchhhHHHHhhccccCCCccccccccccchhhHHHHHHHHHhcCCChh
Confidence 0000 0 014789999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHHhhcCc
Q 003963 749 CRPSFQELVDKLRDLQRQYFQASR 772 (783)
Q Consensus 749 ~RPsa~ell~~L~~L~~~~f~~~~ 772 (783)
+|||+.++ |+|+||+...
T Consensus 363 ~Rpta~e~------L~hp~f~~~~ 380 (382)
T 2vx3_A 363 TRIQPYYA------LQHSFFKKTA 380 (382)
T ss_dssp TSCCHHHH------TTSGGGCC--
T ss_pred hCCCHHHH------hcCcccccCC
Confidence 99999999 7899998653
No 236
>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}
Probab=100.00 E-value=9.9e-40 Score=365.57 Aligned_cols=256 Identities=23% Similarity=0.331 Sum_probs=191.4
Q ss_pred ccceeE-eeeeccCCcEEEEEEEEe---CCceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEeceee--cCCc
Q 003963 504 WEDLTI-GEQIGQGSCGTVYHAVWY---GSQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVT--SPQR 577 (783)
Q Consensus 504 ~~~y~i-~~~LG~G~fG~Vy~a~~~---~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~--~~~~ 577 (783)
.+.|++ +++||+|+||.||+|.+. .++.||||++....... .+.+|+.+|+.++|||||++++++. ....
T Consensus 19 ~~~y~~~g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~~~~----~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~ 94 (405)
T 3rgf_A 19 EDLFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGISM----SACREIALLRELKHPNVISLQKVFLSHADRK 94 (405)
T ss_dssp HHHEECSSCCCC-----EEEEEEESSSSCCCCEEEEECSSSSCCH----HHHHHHHHHHHCCCTTBCCCCEEEEETTTTE
T ss_pred hhhhhhcCcEeeecCCeEEEEEEEccCCCCeEEEEEEECCCCCCH----HHHHHHHHHHhcCCCCeeeEeeEEecCCCCe
Confidence 456776 568999999999999976 34679999997665443 5678999999999999999999994 4678
Q ss_pred eEEEEEecCCCCHHHHHhhc--------CCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEE----cCCCcE
Q 003963 578 LCIVTEFLPRGSLFRLLQRN--------TTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLV----DKHWTV 645 (783)
Q Consensus 578 ~~lV~E~~~ggsL~~~L~~~--------~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl----~~~~~v 645 (783)
+|+||||+. ++|.+++... ...+++..++.++.||+.||.|||+++ |+||||||+|||| +.++.+
T Consensus 95 ~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~--ivH~Dlkp~NIll~~~~~~~~~~ 171 (405)
T 3rgf_A 95 VWLLFDYAE-HDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANW--VLHRDLKPANILVMGEGPERGRV 171 (405)
T ss_dssp EEEEEECCS-EEHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHHHTT--CCCCCCCGGGEEECCSSTTTTCE
T ss_pred EEEEEeCCC-CCHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHhCC--EeCCCcCHHHeEEecCCCCCCcE
Confidence 999999996 5888887532 124889999999999999999999999 9999999999999 677899
Q ss_pred EEEecCCCccccccc---ccccCCCCCCcccCcccccCC-CCCchhHHHHHHHHHHHHHcCCCCCCCCChH---------
Q 003963 646 KVGDFGLSRLKHETY---LTTKTGKGTPQWMAPEVLRNE-PSDEKSDVYSFGVILWELATEKIPWDNLNSM--------- 712 (783)
Q Consensus 646 kL~DFGla~~~~~~~---~~~~~~~Gt~~Y~aPE~~~~~-~~s~~sDIwSLG~il~elltG~~Pf~~~~~~--------- 712 (783)
||+|||+++...... ......+||+.|+|||++.+. .++.++|||||||+||+|++|.+||......
T Consensus 172 kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~ 251 (405)
T 3rgf_A 172 KIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHH 251 (405)
T ss_dssp EECCTTCCC----------------CCCTTCCHHHHTTCCSCCHHHHHHHHHHHHHHHHHSSCTTCCCC------CCCCH
T ss_pred EEEECCCceecCCCCcccccCCCceecCcccCchhhcCCCcccchhhhHHHHHHHHHHHhCCCCCCCccccccccccchH
Confidence 999999998655321 223345789999999999874 4899999999999999999999999754431
Q ss_pred HHHHHhhcccccc------------------------------------cCCCCCCHHHHHHHHHhhhhCCCCCCCHHHH
Q 003963 713 QVIGAVGFMNQRL------------------------------------EIPKDVDPRWAAIVESCWHSDPQCRPSFQEL 756 (783)
Q Consensus 713 ~~~~~i~~~~~~~------------------------------------~~~~~~s~~l~~LI~~cL~~dP~~RPsa~el 756 (783)
..+..+......+ ......++.+.+||.+||..||.+|||+.++
T Consensus 252 ~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~L~~dP~~R~ta~e~ 331 (405)
T 3rgf_A 252 DQLDRIFNVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQA 331 (405)
T ss_dssp HHHHHHHHHHCCCCTTTCGGGGGSTTHHHHHHHCCGGGGTTCCHHHHHHTTTCCTTSHHHHHHHHHSCSSGGGSCCHHHH
T ss_pred HHHHHHHHhhCCCChhhcchhhcCcchhhhhhhccccCCCcchhhhhHhhcCCCCCHHHHHHHHHHccCCcccCCCHHHH
Confidence 1111111000000 0111236789999999999999999999999
Q ss_pred HHHHHHHHHHHhhcCc
Q 003963 757 VDKLRDLQRQYFQASR 772 (783)
Q Consensus 757 l~~L~~L~~~~f~~~~ 772 (783)
|+|+||+...
T Consensus 332 ------L~hp~f~~~~ 341 (405)
T 3rgf_A 332 ------MQDPYFLEDP 341 (405)
T ss_dssp ------HTSGGGTSSS
T ss_pred ------hcChhhccCC
Confidence 7899997654
No 237
>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*
Probab=100.00 E-value=3.6e-39 Score=352.24 Aligned_cols=257 Identities=22% Similarity=0.332 Sum_probs=211.3
Q ss_pred cccccceeEeeeeccCCcEEEEEEEEeCC--ceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCc------eeeEecee
Q 003963 501 EILWEDLTIGEQIGQGSCGTVYHAVWYGS--QDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPN------VLLFMGAV 572 (783)
Q Consensus 501 e~~~~~y~i~~~LG~G~fG~Vy~a~~~~~--~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~Hpn------Iv~l~~~~ 572 (783)
+...++|++.+.||+|+||.||+|.+... +.||||++... ......+.+|+.+++.++|++ |+.+++++
T Consensus 15 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~---~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~ 91 (355)
T 2eu9_A 15 DWLQERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNV---GKYREAARLEINVLKKIKEKDKENKFLCVLMSDWF 91 (355)
T ss_dssp CEETTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSC---HHHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEE
T ss_pred ceecccEEEEEEeeccCCeEEEEEEecCCCceEEEEEEEccc---ccchhHHHHHHHHHHHHhhcCCCCceeEEEeeeee
Confidence 44568999999999999999999998543 57999998643 344567888999999997655 89999999
Q ss_pred ecCCceEEEEEecCCCCHHHHHhhcC-CcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEE------------
Q 003963 573 TSPQRLCIVTEFLPRGSLFRLLQRNT-TKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLV------------ 639 (783)
Q Consensus 573 ~~~~~~~lV~E~~~ggsL~~~L~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl------------ 639 (783)
...+.+|+||||+ +++|.+++.... ..+++..++.++.||+.||+|||+++ |+||||||+||||
T Consensus 92 ~~~~~~~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~~--ivH~Dlkp~NIll~~~~~~~~~~~~ 168 (355)
T 2eu9_A 92 NFHGHMCIAFELL-GKNTFEFLKENNFQPYPLPHVRHMAYQLCHALRFLHENQ--LTHTDLKPENILFVNSEFETLYNEH 168 (355)
T ss_dssp EETTEEEEEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHTTT--EECCCCCGGGEEESCCCEEEEECCC
T ss_pred eeCCeEEEEEecc-CCChHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCC--cccCCCCHHHEEEeccccccccccc
Confidence 9999999999999 667777776543 56899999999999999999999998 9999999999999
Q ss_pred -------cCCCcEEEEecCCCcccccccccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChH
Q 003963 640 -------DKHWTVKVGDFGLSRLKHETYLTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSM 712 (783)
Q Consensus 640 -------~~~~~vkL~DFGla~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~elltG~~Pf~~~~~~ 712 (783)
+.++.+||+|||++...... .....||+.|+|||++.+..++.++|||||||++|+|++|..||......
T Consensus 169 ~~~~~~~~~~~~~kl~Dfg~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~ 245 (355)
T 2eu9_A 169 KSCEEKSVKNTSIRVADFGSATFDHEH---HTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENR 245 (355)
T ss_dssp -CCCEEEESCCCEEECCCTTCEETTSC---CCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH
T ss_pred ccccccccCCCcEEEeecCcccccccc---ccCCcCCCcccCCeeeecCCCCCccchHHHHHHHHHHHhCCCCCCCCCHH
Confidence 56789999999999764432 23457899999999999999999999999999999999999999987766
Q ss_pred HHHHHhhcccccc------------------------------------------cCCCCCCHHHHHHHHHhhhhCCCCC
Q 003963 713 QVIGAVGFMNQRL------------------------------------------EIPKDVDPRWAAIVESCWHSDPQCR 750 (783)
Q Consensus 713 ~~~~~i~~~~~~~------------------------------------------~~~~~~s~~l~~LI~~cL~~dP~~R 750 (783)
.....+....... ......++++.+||.+||..||.+|
T Consensus 246 ~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R 325 (355)
T 2eu9_A 246 EHLVMMEKILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQLFDLMRRMLEFDPAQR 325 (355)
T ss_dssp HHHHHHHHHHCCCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTS
T ss_pred HHHHHHHHHcCCCcHHHhhhccchhhhcccccccccccchhccccccCCcccccccccchhHHHHHHHHHHHhcCChhhC
Confidence 5443332111100 0011124578999999999999999
Q ss_pred CCHHHHHHHHHHHHHHHhhcCc
Q 003963 751 PSFQELVDKLRDLQRQYFQASR 772 (783)
Q Consensus 751 Psa~ell~~L~~L~~~~f~~~~ 772 (783)
||+.++ |+|+||+...
T Consensus 326 pt~~e~------l~hp~f~~~~ 341 (355)
T 2eu9_A 326 ITLAEA------LLHPFFAGLT 341 (355)
T ss_dssp CCHHHH------TTSGGGGGCC
T ss_pred cCHHHH------hcChhhcCCC
Confidence 999999 7899998653
No 238
>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}
Probab=100.00 E-value=1.4e-39 Score=350.30 Aligned_cols=259 Identities=25% Similarity=0.443 Sum_probs=203.8
Q ss_pred cccccccceeEeeeeccCCcEEEEEEEEeC-CceEEEEEEecccCCH----HHHHHHHHHHHHHHhC----CCCceeeEe
Q 003963 499 DYEILWEDLTIGEQIGQGSCGTVYHAVWYG-SQDVAVKVFSRQEYSD----EVIHSFRQEVSLMKRL----RHPNVLLFM 569 (783)
Q Consensus 499 ~~e~~~~~y~i~~~LG~G~fG~Vy~a~~~~-~~~vAiK~i~~~~~~~----~~~~~~~~Ei~il~~l----~HpnIv~l~ 569 (783)
..+...++|++.+.||+|+||.||+|.+.. ++.||||++....... .....+.+|+.++..+ +||||++++
T Consensus 25 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~ 104 (312)
T 2iwi_A 25 DREAFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLL 104 (312)
T ss_dssp --------CEEEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEE
T ss_pred chhhhhhceEEeeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEE
Confidence 345566899999999999999999998754 5689999997654322 1223456799999998 899999999
Q ss_pred ceeecCCceEEEEEe-cCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEc-CCCcEEE
Q 003963 570 GAVTSPQRLCIVTEF-LPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVD-KHWTVKV 647 (783)
Q Consensus 570 ~~~~~~~~~~lV~E~-~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~-~~~~vkL 647 (783)
+++...+..++|||| +.+++|.+++... ..+++..++.++.||+.||.|||+++ |+||||||+|||++ .++.+||
T Consensus 105 ~~~~~~~~~~~v~e~~~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~--i~H~dlkp~Nil~~~~~~~~kl 181 (312)
T 2iwi_A 105 DWFETQEGFMLVLERPLPAQDLFDYITEK-GPLGEGPSRCFFGQVVAAIQHCHSRG--VVHRDIKDENILIDLRRGCAKL 181 (312)
T ss_dssp EEC-----CEEEEECCSSEEEHHHHHHHH-CSCCHHHHHHHHHHHHHHHHHHHHHT--EECCCCSGGGEEEETTTTEEEE
T ss_pred EEEecCCeEEEEEEecCCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCC--eeecCCChhhEEEeCCCCeEEE
Confidence 999999999999999 7889999999764 35899999999999999999999998 99999999999999 8899999
Q ss_pred EecCCCcccccccccccCCCCCCcccCcccccCCCC-CchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccccccc
Q 003963 648 GDFGLSRLKHETYLTTKTGKGTPQWMAPEVLRNEPS-DEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLE 726 (783)
Q Consensus 648 ~DFGla~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~-s~~sDIwSLG~il~elltG~~Pf~~~~~~~~~~~i~~~~~~~~ 726 (783)
+|||++....... .....|++.|+|||++.+..+ +.++|||||||++|+|++|+.||..... . ......
T Consensus 182 ~dfg~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~--~------~~~~~~ 251 (312)
T 2iwi_A 182 IDFGSGALLHDEP--YTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERDQE--I------LEAELH 251 (312)
T ss_dssp CCCSSCEECCSSC--BCCCCSCTTTSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHH--H------HHTCCC
T ss_pred EEcchhhhcccCc--ccccCCcccccCceeeecCCCCCccchHHHHHHHHHHHHHCCCCCCChHH--H------hhhccC
Confidence 9999998665432 234568999999999887666 4589999999999999999999975321 1 123455
Q ss_pred CCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhcCcCCCC
Q 003963 727 IPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQASRSTVG 776 (783)
Q Consensus 727 ~~~~~s~~l~~LI~~cL~~dP~~RPsa~ell~~L~~L~~~~f~~~~~~~~ 776 (783)
++..+++.+.+||.+||..||.+||++.++ ++|+||+.....+.
T Consensus 252 ~~~~~~~~~~~li~~~l~~~p~~Rps~~e~------l~~~~~~~~~~~~~ 295 (312)
T 2iwi_A 252 FPAHVSPDCCALIRRCLAPKPSSRPSLEEI------LLDPWMQTPAEDVP 295 (312)
T ss_dssp CCTTSCHHHHHHHHHHTCSSTTTSCCHHHH------HHSTTTCC------
T ss_pred CcccCCHHHHHHHHHHccCChhhCcCHHHH------hcChhhcCchhccc
Confidence 677899999999999999999999999999 68899987665543
No 239
>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*
Probab=100.00 E-value=3.8e-39 Score=351.86 Aligned_cols=255 Identities=22% Similarity=0.337 Sum_probs=183.1
Q ss_pred cccceeEee-eeccCCcEEEEEEEEeC-CceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEeceeec----CC
Q 003963 503 LWEDLTIGE-QIGQGSCGTVYHAVWYG-SQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTS----PQ 576 (783)
Q Consensus 503 ~~~~y~i~~-~LG~G~fG~Vy~a~~~~-~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~----~~ 576 (783)
..++|.+.+ .||+|+||.||+|.+.. ++.||||++.... . ...+....++.+.||||+++++++.. ..
T Consensus 26 ~~~~y~i~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~---~---~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~ 99 (336)
T 3fhr_A 26 VTDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDSP---K---ARQEVDHHWQASGGPHIVCILDVYENMHHGKR 99 (336)
T ss_dssp GGGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESSH---H---HHHHHHHHHHHTTSTTBCCEEEEEEEEETTEE
T ss_pred ccceeEecceeeeeCCCeEEEEEEECCCCCEEEEEEecCcH---H---HHHHHHHHHHhcCCCChHHHHHHHhhccCCCc
Confidence 457899965 69999999999999874 5789999986532 1 12223344677899999999999876 45
Q ss_pred ceEEEEEecCCCCHHHHHhhcC-CcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcC---CCcEEEEecCC
Q 003963 577 RLCIVTEFLPRGSLFRLLQRNT-TKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDK---HWTVKVGDFGL 652 (783)
Q Consensus 577 ~~~lV~E~~~ggsL~~~L~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~---~~~vkL~DFGl 652 (783)
.+++|||||++++|.+++.... ..+++..++.++.||+.||.|||+++ |+||||||+||||+. ++.+||+|||+
T Consensus 100 ~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~ql~~~l~~LH~~~--ivH~dlkp~NIll~~~~~~~~~kl~Dfg~ 177 (336)
T 3fhr_A 100 CLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSHN--IAHRDVKPENLLYTSKEKDAVLKLTDFGF 177 (336)
T ss_dssp EEEEEEECCTTEEHHHHHHTC-CCCCBHHHHHHHHHHHHHHHHHHHHTT--EECSCCSGGGEEESCSSTTCCEEECCCTT
T ss_pred eEEEEEeccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC--eecCCCCHHHEEEEecCCCceEEEecccc
Confidence 5899999999999999997653 46999999999999999999999998 999999999999976 45599999999
Q ss_pred CcccccccccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHH----hhccc--cccc
Q 003963 653 SRLKHETYLTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGA----VGFMN--QRLE 726 (783)
Q Consensus 653 a~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~elltG~~Pf~~~~~~~~~~~----i~~~~--~~~~ 726 (783)
+...... ......||+.|+|||++.+..++.++|||||||++|+|++|..||........... +.... ....
T Consensus 178 ~~~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (336)
T 3fhr_A 178 AKETTQN--ALQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRLGQYGFPNP 255 (336)
T ss_dssp CEEC------------------------CHHHHHHHHHHHHHHHHHHHHSSCCC---------------------CCCTT
T ss_pred ceecccc--ccccCCCCcCccChhhhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCccchhhhhhHHHhhhccccccCch
Confidence 9765432 22345789999999999888899999999999999999999999976654432111 11111 1122
Q ss_pred CCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhcCcC
Q 003963 727 IPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQASRS 773 (783)
Q Consensus 727 ~~~~~s~~l~~LI~~cL~~dP~~RPsa~ell~~L~~L~~~~f~~~~~ 773 (783)
....+++++.+||.+||..||.+|||+.++ ++|+||+....
T Consensus 256 ~~~~~~~~~~~li~~~L~~dP~~Rpt~~el------l~hp~~~~~~~ 296 (336)
T 3fhr_A 256 EWSEVSEDAKQLIRLLLKTDPTERLTITQF------MNHPWINQSMV 296 (336)
T ss_dssp TSTTCCHHHHHHHHHHSCSSGGGSCCHHHH------HHSHHHHTGGG
T ss_pred hhccCCHHHHHHHHHHCCCChhHCcCHHHH------hcCcccccccc
Confidence 235789999999999999999999999999 67999976543
No 240
>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...
Probab=100.00 E-value=2e-39 Score=351.49 Aligned_cols=254 Identities=23% Similarity=0.415 Sum_probs=212.9
Q ss_pred ccccccceeEeeeeccCCcEEEEEEEEeC-CceEEEEEEecccCCH----HHHHHHHHHHHHHHhCC--CCceeeEecee
Q 003963 500 YEILWEDLTIGEQIGQGSCGTVYHAVWYG-SQDVAVKVFSRQEYSD----EVIHSFRQEVSLMKRLR--HPNVLLFMGAV 572 (783)
Q Consensus 500 ~e~~~~~y~i~~~LG~G~fG~Vy~a~~~~-~~~vAiK~i~~~~~~~----~~~~~~~~Ei~il~~l~--HpnIv~l~~~~ 572 (783)
.+...++|++.+.||+|+||.||+|.+.. ++.||||++....... .....+.+|+.+++.++ ||||+++++++
T Consensus 38 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~~ 117 (320)
T 3a99_A 38 KEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWF 117 (320)
T ss_dssp --CCTTTEEEEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEE
T ss_pred cCCccCceEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEEE
Confidence 34567899999999999999999999754 5679999997654321 11234567999999996 59999999999
Q ss_pred ecCCceEEEEEecCC-CCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEc-CCCcEEEEec
Q 003963 573 TSPQRLCIVTEFLPR-GSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVD-KHWTVKVGDF 650 (783)
Q Consensus 573 ~~~~~~~lV~E~~~g-gsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~-~~~~vkL~DF 650 (783)
...+..++||||+.+ ++|.+++... ..+++..++.++.||+.||.|||+++ |+||||||+||||+ .++.+||+||
T Consensus 118 ~~~~~~~lv~e~~~~~~~L~~~l~~~-~~l~~~~~~~i~~qi~~~L~~LH~~~--ivH~Dlkp~NIll~~~~~~~kL~Df 194 (320)
T 3a99_A 118 ERPDSFVLILERPEPVQDLFDFITER-GALQEELARSFFWQVLEAVRHCHNCG--VLHRDIKDENILIDLNRGELKLIDF 194 (320)
T ss_dssp ECSSEEEEEEECCSSEEEHHHHHHHH-CSCCHHHHHHHHHHHHHHHHHHHHTT--EECCCCSGGGEEEETTTTEEEECCC
T ss_pred ecCCcEEEEEEcCCCCccHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHHCC--cEeCCCCHHHEEEeCCCCCEEEeeC
Confidence 999999999999976 8999999764 46899999999999999999999998 99999999999999 7889999999
Q ss_pred CCCcccccccccccCCCCCCcccCcccccCCCC-CchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhcccccccCCC
Q 003963 651 GLSRLKHETYLTTKTGKGTPQWMAPEVLRNEPS-DEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLEIPK 729 (783)
Q Consensus 651 Gla~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~-s~~sDIwSLG~il~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~ 729 (783)
|++....... .....||+.|+|||++.+..+ +.++|||||||++|+|++|..||..... . ......++.
T Consensus 195 g~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~--~------~~~~~~~~~ 264 (320)
T 3a99_A 195 GSGALLKDTV--YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE--I------IRGQVFFRQ 264 (320)
T ss_dssp TTCEECCSSC--BCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHH--H------HHCCCCCSS
T ss_pred cccccccccc--ccCCCCCccCCChHHhccCCCCCccchHHhHHHHHHHHHHCCCCCCChhh--h------hcccccccc
Confidence 9998665432 234568999999999887665 6889999999999999999999975321 1 122345667
Q ss_pred CCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhcCc
Q 003963 730 DVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQASR 772 (783)
Q Consensus 730 ~~s~~l~~LI~~cL~~dP~~RPsa~ell~~L~~L~~~~f~~~~ 772 (783)
.+++++.+||.+||..||.+||++.++ ++|+||+...
T Consensus 265 ~~~~~~~~li~~~l~~dp~~Rps~~~l------l~hp~~~~~~ 301 (320)
T 3a99_A 265 RVSSECQHLIRWCLALRPSDRPTFEEI------QNHPWMQDVL 301 (320)
T ss_dssp CCCHHHHHHHHHHTCSSGGGSCCHHHH------HTSGGGSSCC
T ss_pred cCCHHHHHHHHHHccCChhhCcCHHHH------hcCHhhcCcc
Confidence 899999999999999999999999999 6789997654
No 241
>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A
Probab=100.00 E-value=4.6e-39 Score=354.65 Aligned_cols=257 Identities=19% Similarity=0.311 Sum_probs=206.0
Q ss_pred ccccceeEeeeeccCCcEEEEEEEEeC-CceEEEEEEecccCCHHHHHHHHHHHHHHHhCC-----------CCceeeEe
Q 003963 502 ILWEDLTIGEQIGQGSCGTVYHAVWYG-SQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLR-----------HPNVLLFM 569 (783)
Q Consensus 502 ~~~~~y~i~~~LG~G~fG~Vy~a~~~~-~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~-----------HpnIv~l~ 569 (783)
...++|++.++||+|+||.||+|.+.. ++.||||++... ......+.+|+.+++.+. ||||++++
T Consensus 16 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~ 92 (373)
T 1q8y_A 16 YKDARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGD---KVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLL 92 (373)
T ss_dssp ETTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC---HHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCC
T ss_pred ccCCeEEEEEeeeecCCeEEEEEEecCCCcEEEEEEecCC---ccchhhhhHHHHHHHHhhcccccchhccccchHHHHH
Confidence 345789999999999999999999854 577999998643 334567788999999886 89999999
Q ss_pred ceeecCC----ceEEEEEecCCCCHHHHHhhc-CCcchHHHHHHHHHHHHHHHHHHHhC-CCCEEecCCCCCCEEEc---
Q 003963 570 GAVTSPQ----RLCIVTEFLPRGSLFRLLQRN-TTKLDWRRRILMALDIARGVSYLHHC-NPPIIHRDLKSSNLLVD--- 640 (783)
Q Consensus 570 ~~~~~~~----~~~lV~E~~~ggsL~~~L~~~-~~~l~~~~~~~i~~qi~~aL~~LH~~-~~~IvHrDIKp~NILl~--- 640 (783)
+++...+ .+++||||+ +++|.+++... ...+++..++.++.||+.||+|||++ + |+||||||+||||+
T Consensus 93 ~~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~~--ivH~Dikp~NIll~~~~ 169 (373)
T 1q8y_A 93 DHFNHKGPNGVHVVMVFEVL-GENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRCG--IIHTDIKPENVLMEIVD 169 (373)
T ss_dssp EEEEEEETTEEEEEEEECCC-CEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTC--EECSCCSGGGEEEEEEE
T ss_pred HHhhccCCCCceEEEEEecC-CCCHHHHHHHhhccCCcHHHHHHHHHHHHHHHHHHHhcCC--EEecCCChHHeEEeccC
Confidence 9987654 789999999 88999999763 34589999999999999999999997 8 99999999999994
Q ss_pred ---CCCcEEEEecCCCcccccccccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChH-----
Q 003963 641 ---KHWTVKVGDFGLSRLKHETYLTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSM----- 712 (783)
Q Consensus 641 ---~~~~vkL~DFGla~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~elltG~~Pf~~~~~~----- 712 (783)
..+.+||+|||++...... .....||+.|+|||++.+..++.++|||||||++|+|++|..||......
T Consensus 170 ~~~~~~~~kl~Dfg~a~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~ 246 (373)
T 1q8y_A 170 SPENLIQIKIADLGNACWYDEH---YTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKD 246 (373)
T ss_dssp TTTTEEEEEECCCTTCEETTBC---CCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC---------CH
T ss_pred CCcCcceEEEcccccccccCCC---CCCCCCCccccCcHHHhCCCCCchHhHHHHHHHHHHHHhCCCCCCCCcccccCCh
Confidence 3448999999999765543 23457899999999999999999999999999999999999999765421
Q ss_pred -HHHHHhhc-c---------------------------------------cccccCCCCCCHHHHHHHHHhhhhCCCCCC
Q 003963 713 -QVIGAVGF-M---------------------------------------NQRLEIPKDVDPRWAAIVESCWHSDPQCRP 751 (783)
Q Consensus 713 -~~~~~i~~-~---------------------------------------~~~~~~~~~~s~~l~~LI~~cL~~dP~~RP 751 (783)
..+..+.. . .....++..+++++.+||.+||+.||.+||
T Consensus 247 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rp 326 (373)
T 1q8y_A 247 DDHIAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRA 326 (373)
T ss_dssp HHHHHHHHHHHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCB
T ss_pred HHHHHHHHHhcCCCCHHHHhccchhhhhcCCcchhcccccccccchhhhhhhcccCCcchHHHHHHHHHHHhccCccccC
Confidence 11111100 0 001123344567899999999999999999
Q ss_pred CHHHHHHHHHHHHHHHhhcCcC
Q 003963 752 SFQELVDKLRDLQRQYFQASRS 773 (783)
Q Consensus 752 sa~ell~~L~~L~~~~f~~~~~ 773 (783)
|+.++ |+|+||+....
T Consensus 327 t~~el------l~hp~f~~~~~ 342 (373)
T 1q8y_A 327 DAGGL------VNHPWLKDTLG 342 (373)
T ss_dssp CHHHH------HTCGGGTTCTT
T ss_pred CHHHH------hhChhhhcccC
Confidence 99999 78999987643
No 242
>3gxj_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3hmm_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=4e-41 Score=359.77 Aligned_cols=252 Identities=33% Similarity=0.553 Sum_probs=188.6
Q ss_pred ccceeEeeeeccCCcEEEEEEEEeCCceEEEEEEecccCCHHHHHHHHHHHHHHHh--CCCCceeeEeceeecCC----c
Q 003963 504 WEDLTIGEQIGQGSCGTVYHAVWYGSQDVAVKVFSRQEYSDEVIHSFRQEVSLMKR--LRHPNVLLFMGAVTSPQ----R 577 (783)
Q Consensus 504 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~--l~HpnIv~l~~~~~~~~----~ 577 (783)
.++|++.++||+|+||.||+|.+. ++.||||++.... ...+.+|.+++.. ++||||+++++++.... .
T Consensus 2 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~-----~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~ 75 (303)
T 3gxj_A 2 ARTIVLQESIGKGRFGEVWRGKWR-GEEVAVKIFSSRE-----ERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQ 75 (303)
T ss_dssp GGGCCCCEEEEECSSSEEEEC-CT-TSCEEEEECC-TT-----HHHHHHHHHHHTSTTCCC-CBCCEEEEEEEECSSSEE
T ss_pred cceeeehhhccCCCCeEEEEEEEc-CcceEEEEecccc-----hhhHHHHHHHHHHHhccCcceeeeeeecccCCCccce
Confidence 368999999999999999999865 6789999986432 2456678888887 78999999999998776 7
Q ss_pred eEEEEEecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHH--------hCCCCEEecCCCCCCEEEcCCCcEEEEe
Q 003963 578 LCIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLH--------HCNPPIIHRDLKSSNLLVDKHWTVKVGD 649 (783)
Q Consensus 578 ~~lV~E~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH--------~~~~~IvHrDIKp~NILl~~~~~vkL~D 649 (783)
+++||||+++|+|.+++... .+++..++.++.|++.||.||| +++ |+||||||+||||+.++.+||+|
T Consensus 76 ~~lv~e~~~~g~L~~~l~~~--~~~~~~~~~~~~~i~~~l~~lH~~~~~~~~~~~--ivH~Dlkp~Nil~~~~~~~kl~D 151 (303)
T 3gxj_A 76 LWLVSDYHEHGSLFDYLNRY--TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPA--IAHRDLKSKNILVKKNGTCCIAD 151 (303)
T ss_dssp EEEEEECCTTCCHHHHHHHC--CBCC-CHHHHC-CHHHHHC-CCCCBCSTTCBC---CCCSCCCGGGC-CCTTCCC-BCC
T ss_pred eEEEEeccCCCCHHHHHhcc--CcchHHHHHHHHHHHHHHHHHHHHHhhhccCCC--EeeCcCCHHHeEECCCCCEEEee
Confidence 89999999999999999754 4788889999999999999999 877 99999999999999999999999
Q ss_pred cCCCccccccccc----ccCCCCCCcccCcccccCC------CCCchhHHHHHHHHHHHHHcC----------CCCCCCC
Q 003963 650 FGLSRLKHETYLT----TKTGKGTPQWMAPEVLRNE------PSDEKSDVYSFGVILWELATE----------KIPWDNL 709 (783)
Q Consensus 650 FGla~~~~~~~~~----~~~~~Gt~~Y~aPE~~~~~------~~s~~sDIwSLG~il~elltG----------~~Pf~~~ 709 (783)
||++......... .....||+.|+|||++.+. .++.++|||||||++|+|++| ..||...
T Consensus 152 Fg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~p~~~~ 231 (303)
T 3gxj_A 152 LGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDL 231 (303)
T ss_dssp CCC-CCEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHC-CCCC-CTGGGBCBTTBC-CCCCTTTTT
T ss_pred cCcceeccCCCcccccccCCCCcCccccCHhhhcCcccccccccCcchhHHHHHHHHHHHHhcCCCccccceeecccccc
Confidence 9999765443222 2234799999999999876 334689999999999999999 7787554
Q ss_pred Ch-----HHHHHHhhcccccccCCC-----CCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHH
Q 003963 710 NS-----MQVIGAVGFMNQRLEIPK-----DVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQR 765 (783)
Q Consensus 710 ~~-----~~~~~~i~~~~~~~~~~~-----~~s~~l~~LI~~cL~~dP~~RPsa~ell~~L~~L~~ 765 (783)
.. ......+........++. ..++.+.+||.+||..||.+|||+.++++.|+.+..
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~l~~ 297 (303)
T 3gxj_A 232 VPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQ 297 (303)
T ss_dssp CC-CCCCC-CHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHC-CC
T ss_pred CCCCccHHHHHHHHHHhhcCCCccccccchhhHHHHHHHHHHHhccCcccCCCHHHHHHHHHHhhh
Confidence 22 122222221222233332 233579999999999999999999999999887653
No 243
>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}
Probab=100.00 E-value=4.8e-39 Score=363.36 Aligned_cols=255 Identities=25% Similarity=0.354 Sum_probs=198.2
Q ss_pred ccccceeEeeeeccCCcEEEEEEEEeCCceEEEEEEecccCCHHHHHHHHHHHHHHHhC-CCCceeeEeceeecCCceEE
Q 003963 502 ILWEDLTIGEQIGQGSCGTVYHAVWYGSQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRL-RHPNVLLFMGAVTSPQRLCI 580 (783)
Q Consensus 502 ~~~~~y~i~~~LG~G~fG~Vy~a~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l-~HpnIv~l~~~~~~~~~~~l 580 (783)
+...+|.+.++||+|+||.||......++.||||++...... .+.+|+.+|+.+ +|||||++++++.....+|+
T Consensus 21 i~~~~y~~~~~LG~G~~G~V~~~~~~~~~~vAvK~~~~~~~~-----~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~~l 95 (432)
T 3p23_A 21 VGKISFCPKDVLGHGAEGTIVYRGMFDNRDVAVKRILPECFS-----FADREVQLLRESDEHPNVIRYFCTEKDRQFQYI 95 (432)
T ss_dssp ETTEEEEEEEEEEECGGGCEEEEEESSSSEEEEEEECTTTEE-----ECHHHHHHHHHSCCCTTBCCEEEEEEETTEEEE
T ss_pred EccEEEecCCeeecCcCEEEEEEEEeCCeEEEEEEECHHHHH-----HHHHHHHHHHhccCCCCcCeEEEEEecCCEEEE
Confidence 344579999999999999977655566789999998654322 245799999999 79999999999999999999
Q ss_pred EEEecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcC-----CCcEEEEecCCCcc
Q 003963 581 VTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDK-----HWTVKVGDFGLSRL 655 (783)
Q Consensus 581 V~E~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~-----~~~vkL~DFGla~~ 655 (783)
|||||. |+|.+++......+....++.++.||+.||.|||+++ |+||||||+||||+. ...+||+|||+++.
T Consensus 96 v~E~~~-g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~--ivHrDlKp~NIll~~~~~~~~~~~kL~DFG~a~~ 172 (432)
T 3p23_A 96 AIELCA-ATLQEYVEQKDFAHLGLEPITLLQQTTSGLAHLHSLN--IVHRDLKPHNILISMPNAHGKIKAMISDFGLCKK 172 (432)
T ss_dssp EEECCS-EEHHHHHHSSSCCCCSSCHHHHHHHHHHHHHHHHHTT--CCCCCCSTTSEEECCCBTTTBCCEEECCTTEEEC
T ss_pred EEECCC-CCHHHHHHhcCCCccchhHHHHHHHHHHHHHHHHHCc--CEeCCCCHHHEEEecCCCCCceeEEEecccceee
Confidence 999995 5999999876655666677889999999999999999 999999999999953 33688999999976
Q ss_pred ccccc---ccccCCCCCCcccCccccc---CCCCCchhHHHHHHHHHHHHHc-CCCCCCCCChHHHHHHhhccccc-ccC
Q 003963 656 KHETY---LTTKTGKGTPQWMAPEVLR---NEPSDEKSDVYSFGVILWELAT-EKIPWDNLNSMQVIGAVGFMNQR-LEI 727 (783)
Q Consensus 656 ~~~~~---~~~~~~~Gt~~Y~aPE~~~---~~~~s~~sDIwSLG~il~ellt-G~~Pf~~~~~~~~~~~i~~~~~~-~~~ 727 (783)
..... ......+||+.|+|||++. ...++.++|||||||++|+|++ |..||...........+...... ...
T Consensus 173 ~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il~ellt~g~~pf~~~~~~~~~~~~~~~~~~~~~~ 252 (432)
T 3p23_A 173 LAVGRHSFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQANILLGACSLDCLHP 252 (432)
T ss_dssp C------------CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHHHHHHHTTSCBTTBSTTTHHHHHHTTCCCCTTSCT
T ss_pred ccCCCcceeeccccCCCcCccChhhhhcccccCCCcHHHHHHHHHHHHHHHcCCCCCcchhhHHHHHHHhccCCccccCc
Confidence 54321 2233457999999999998 4567889999999999999999 99999766554443332211111 112
Q ss_pred CCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhc
Q 003963 728 PKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQA 770 (783)
Q Consensus 728 ~~~~s~~l~~LI~~cL~~dP~~RPsa~ell~~L~~L~~~~f~~ 770 (783)
+...+..+.+||.+||+.||.+|||+.++ ++|+||+.
T Consensus 253 ~~~~~~~~~~li~~~L~~dP~~Rps~~ev------l~hp~f~~ 289 (432)
T 3p23_A 253 EKHEDVIARELIEKMIAMDPQKRPSAKHV------LKHPFFWS 289 (432)
T ss_dssp TCHHHHHHHHHHHHHSCSSGGGSCCHHHH------HTSTTTCC
T ss_pred cccccHHHHHHHHHHHhCCHhhCCCHHHH------HhCccccC
Confidence 23345678999999999999999999999 56677643
No 244
>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*
Probab=100.00 E-value=1.7e-37 Score=351.05 Aligned_cols=250 Identities=25% Similarity=0.348 Sum_probs=191.0
Q ss_pred cceeEeeeeccCCcEEEEEEEEeCCceEEEEEEecccCCHHHHHHHHHHHHHHHhC-CCCceeeEeceeecCCceEEEEE
Q 003963 505 EDLTIGEQIGQGSCGTVYHAVWYGSQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRL-RHPNVLLFMGAVTSPQRLCIVTE 583 (783)
Q Consensus 505 ~~y~i~~~LG~G~fG~Vy~a~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l-~HpnIv~l~~~~~~~~~~~lV~E 583 (783)
+.|.+.+.||+|+||+||.+....++.||||++.... ...+.+|+.+++.+ +|||||++++++.....+|+|||
T Consensus 15 ~~~~~~~~LG~G~~g~V~~~~~~~g~~vAvK~~~~~~-----~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~lv~E 89 (434)
T 2rio_A 15 NLVVSEKILGYGSSGTVVFQGSFQGRPVAVKRMLIDF-----CDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALE 89 (434)
T ss_dssp SCEEEEEEEEECSTTCEEEEEESSSSEEEEEEEEGGG-----HHHHHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEEC
T ss_pred heeeccCeEeeCCCeEEEEEEEECCeEEEEEEEcHHH-----HHHHHHHHHHHHhccCCCCcCeEEEEEecCCeEEEEEe
Confidence 4566778999999999988766677899999986543 24567899999876 89999999999999999999999
Q ss_pred ecCCCCHHHHHhhcCCcc------hHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCC-------------Cc
Q 003963 584 FLPRGSLFRLLQRNTTKL------DWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKH-------------WT 644 (783)
Q Consensus 584 ~~~ggsL~~~L~~~~~~l------~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~-------------~~ 644 (783)
||+ |+|.+++....... .+..++.++.||+.||+|||+++ |+||||||+||||+.+ +.
T Consensus 90 ~~~-gsL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~--ivHrDLkp~NILl~~~~~~~~~~~~~~~~~~ 166 (434)
T 2rio_A 90 LCN-LNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSLK--IIHRDLKPQNILVSTSSRFTADQQTGAENLR 166 (434)
T ss_dssp CCS-EEHHHHHHTC------------CCHHHHHHHHHHHHHHHHHTT--EECCCCSGGGEEEECCHHHHSCCTTCCCSCE
T ss_pred cCC-CCHHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHHHCC--ccccCCChHhEEEecCcccccccccCCCceE
Confidence 995 59999997643211 22345679999999999999998 9999999999999754 48
Q ss_pred EEEEecCCCcccccccc----cccCCCCCCcccCcccccC-------CCCCchhHHHHHHHHHHHHHc-CCCCCCCCChH
Q 003963 645 VKVGDFGLSRLKHETYL----TTKTGKGTPQWMAPEVLRN-------EPSDEKSDVYSFGVILWELAT-EKIPWDNLNSM 712 (783)
Q Consensus 645 vkL~DFGla~~~~~~~~----~~~~~~Gt~~Y~aPE~~~~-------~~~s~~sDIwSLG~il~ellt-G~~Pf~~~~~~ 712 (783)
+||+|||+++....... ......||+.|+|||++.+ ..++.++|||||||++|+|++ |..||......
T Consensus 167 ~kL~DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~ 246 (434)
T 2rio_A 167 ILISDFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSR 246 (434)
T ss_dssp EEECCCTTCEECCC--------------CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHTTSCCTTCSTTTH
T ss_pred EEEcccccceecCCCCccceeeecCCCCCCCccCHHHhccccccccccCcchhhhhHhHHHHHHHHHhCCCCCCCCchhh
Confidence 99999999986654321 1224579999999999976 568999999999999999999 99999765443
Q ss_pred HHHHHhhcccccccC----CCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhh
Q 003963 713 QVIGAVGFMNQRLEI----PKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQ 769 (783)
Q Consensus 713 ~~~~~i~~~~~~~~~----~~~~s~~l~~LI~~cL~~dP~~RPsa~ell~~L~~L~~~~f~ 769 (783)
... .+......... +..+++++.+||.+||+.||.+|||+.++ ++|+||.
T Consensus 247 ~~~-i~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~ei------l~hp~f~ 300 (434)
T 2rio_A 247 ESN-IIRGIFSLDEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKV------LRHPLFW 300 (434)
T ss_dssp HHH-HHHTCCCCCCCTTCCCHHHHHHHHHHHHHHTCSSGGGSCCHHHH------HTSGGGS
T ss_pred HHH-HhcCCCCcccccccccccchHHHHHHHHHHhhCChhhCCCHHHH------HhCCccC
Confidence 321 11111111111 11245789999999999999999999999 5677774
No 245
>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A
Probab=100.00 E-value=4.6e-37 Score=328.09 Aligned_cols=232 Identities=16% Similarity=0.136 Sum_probs=192.6
Q ss_pred ccccceeEeeeeccCCcEEEEEEEEeC-CceEEEEEEecccCC-HHHHHHHHHHHHHHHhCCCCceeeEeceeecCCceE
Q 003963 502 ILWEDLTIGEQIGQGSCGTVYHAVWYG-SQDVAVKVFSRQEYS-DEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLC 579 (783)
Q Consensus 502 ~~~~~y~i~~~LG~G~fG~Vy~a~~~~-~~~vAiK~i~~~~~~-~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~ 579 (783)
...++|++.+.||+|+||.||+|.+.. ++.||||++...... ......+.+|+.++..++||||+++++++...+..|
T Consensus 28 ~~~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~ 107 (286)
T 3uqc_A 28 IANGRYRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVVHTRAGGL 107 (286)
T ss_dssp ETTTTEEEEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEE
T ss_pred EecCcEEEEEEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCcceeeEEEEECCcEE
Confidence 455789999999999999999999865 578999999876543 566678999999999999999999999999999999
Q ss_pred EEEEecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCcccccc
Q 003963 580 IVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHET 659 (783)
Q Consensus 580 lV~E~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~~~ 659 (783)
+||||++|++|.+++... .....+..++.||+.||+|||++| |+||||||+||||+.++.+||+++|
T Consensus 108 lv~e~~~g~~L~~~l~~~---~~~~~~~~i~~ql~~aL~~lH~~g--ivH~Dikp~NIll~~~g~~kl~~~~-------- 174 (286)
T 3uqc_A 108 VVAEWIRGGSLQEVADTS---PSPVGAIRAMQSLAAAADAAHRAG--VALSIDHPSRVRVSIDGDVVLAYPA-------- 174 (286)
T ss_dssp EEEECCCEEEHHHHHTTC---CCHHHHHHHHHHHHHHHHHHHHTT--CCCCCCSGGGEEEETTSCEEECSCC--------
T ss_pred EEEEecCCCCHHHHHhcC---CChHHHHHHHHHHHHHHHHHHHCC--CccCCCCcccEEEcCCCCEEEEecc--------
Confidence 999999999999999643 344567889999999999999999 9999999999999999999997544
Q ss_pred cccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHH-hhcccc----cccCCCCCCHH
Q 003963 660 YLTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGA-VGFMNQ----RLEIPKDVDPR 734 (783)
Q Consensus 660 ~~~~~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~elltG~~Pf~~~~~~~~~~~-i~~~~~----~~~~~~~~s~~ 734 (783)
|++ .++.++|||||||++|+|++|+.||...+....+.. ...... ...++..++++
T Consensus 175 ------------~~~-------~~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (286)
T 3uqc_A 175 ------------TMP-------DANPQDDIRGIGASLYALLVNRWPLPEAGVRSGLAPAERDTAGQPIEPADIDRDIPFQ 235 (286)
T ss_dssp ------------CCT-------TCCHHHHHHHHHHHHHHHHHSEECSCCCSBCCCSEECCBCTTSCBCCHHHHCTTSCHH
T ss_pred ------------ccC-------CCCchhHHHHHHHHHHHHHHCCCCCCcCCcchhhHHHHHHhccCCCChhhcccCCCHH
Confidence 333 367999999999999999999999987654321100 000111 11234678999
Q ss_pred HHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHH
Q 003963 735 WAAIVESCWHSDPQCRPSFQELVDKLRDLQRQ 766 (783)
Q Consensus 735 l~~LI~~cL~~dP~~RPsa~ell~~L~~L~~~ 766 (783)
+.+||.+||+.||.+| |+.++++.|+++...
T Consensus 236 l~~li~~~l~~dP~~R-s~~el~~~L~~~~~~ 266 (286)
T 3uqc_A 236 ISAVAARSVQGDGGIR-SASTLLNLMQQATAV 266 (286)
T ss_dssp HHHHHHHHHCTTSSCC-CHHHHHHHHHHHHC-
T ss_pred HHHHHHHHcccCCccC-CHHHHHHHHHHHhcc
Confidence 9999999999999999 999999999887543
No 246
>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*
Probab=100.00 E-value=9.7e-37 Score=326.76 Aligned_cols=236 Identities=23% Similarity=0.388 Sum_probs=189.9
Q ss_pred ccccceeEe-eeeccCCcEEEEEEEEeC-CceEEEEEEecccCCHHHHHHHHHHHHHH-HhCCCCceeeEeceeec----
Q 003963 502 ILWEDLTIG-EQIGQGSCGTVYHAVWYG-SQDVAVKVFSRQEYSDEVIHSFRQEVSLM-KRLRHPNVLLFMGAVTS---- 574 (783)
Q Consensus 502 ~~~~~y~i~-~~LG~G~fG~Vy~a~~~~-~~~vAiK~i~~~~~~~~~~~~~~~Ei~il-~~l~HpnIv~l~~~~~~---- 574 (783)
...++|.+. +.||+|+||.||++.+.. ++.||||++... ..+.+|+.++ +.++||||+++++++..
T Consensus 14 ~~~~~y~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-------~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~ 86 (299)
T 3m2w_A 14 AIIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC-------PKARREVELHWRASQCPHIVRIVDVYENLYAG 86 (299)
T ss_dssp CGGGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS-------HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETT
T ss_pred ccccchhhcCcccccCCCeEEEEEEEcCCCcEEEEEEeccc-------HHHHHHHHHHHHhccCCCchhHHhhhhhhcCC
Confidence 345678887 789999999999999854 568999998642 2456788887 66689999999999876
Q ss_pred CCceEEEEEecCCCCHHHHHhhcC-CcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcC---CCcEEEEec
Q 003963 575 PQRLCIVTEFLPRGSLFRLLQRNT-TKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDK---HWTVKVGDF 650 (783)
Q Consensus 575 ~~~~~lV~E~~~ggsL~~~L~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~---~~~vkL~DF 650 (783)
...+++||||+++++|.+++.... ..+++..++.++.||+.||.|||+++ |+||||||+||||+. ++.+||+||
T Consensus 87 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~--i~H~dlkp~Nil~~~~~~~~~~kl~Df 164 (299)
T 3m2w_A 87 RKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSIN--IAHRDVKPENLLYTSKRPNAILKLTDF 164 (299)
T ss_dssp EEEEEEEECCCCSCBHHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTT--EECCCCSGGGEEESSSSTTCCEEECCC
T ss_pred CceEEEEEeecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCC--cccCCCCHHHEEEecCCCCCcEEEecc
Confidence 677999999999999999997653 46999999999999999999999999 999999999999998 789999999
Q ss_pred CCCcccccccccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhc--ccccccCC
Q 003963 651 GLSRLKHETYLTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGF--MNQRLEIP 728 (783)
Q Consensus 651 Gla~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~elltG~~Pf~~~~~~~~~~~i~~--~~~~~~~~ 728 (783)
|++.... +..++.++|||||||++|+|++|..||.............. ......++
T Consensus 165 g~a~~~~----------------------~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 222 (299)
T 3m2w_A 165 GFAKETT----------------------GEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFP 222 (299)
T ss_dssp TTCEECT----------------------TCGGGGHHHHHHHHHHHHHHHHSSCSCCC-------CCSCCSSCTTCCSSC
T ss_pred ccccccc----------------------cccCCchhhHHHHHHHHHHHHHCCCCCCCCcchhhhHHHHHHHhhccccCC
Confidence 9985432 23467899999999999999999999977654433211111 11122222
Q ss_pred ----CCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhcCcCC
Q 003963 729 ----KDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQASRST 774 (783)
Q Consensus 729 ----~~~s~~l~~LI~~cL~~dP~~RPsa~ell~~L~~L~~~~f~~~~~~ 774 (783)
..+++++.+||.+||..||.+|||+.++ ++|+||+.....
T Consensus 223 ~~~~~~~~~~~~~li~~~l~~dP~~Rps~~e~------l~hp~~~~~~~~ 266 (299)
T 3m2w_A 223 NPEWSEVSEEVKMLIRNLLKTEPTQRMTITEF------MNHPWIMQSTKV 266 (299)
T ss_dssp HHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHH------HTSHHHHTGGGS
T ss_pred chhcccCCHHHHHHHHHHcccChhhCCCHHHH------hcChhhcccccC
Confidence 5689999999999999999999999999 679999776543
No 247
>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}
Probab=100.00 E-value=3.2e-37 Score=346.44 Aligned_cols=242 Identities=15% Similarity=0.151 Sum_probs=188.3
Q ss_pred ccceeEeeeeccCCcEEEEEEEEeC-CceEEEEEEecccC-CHHHHHHHHHHHHHHHhCCC-CceeeE------------
Q 003963 504 WEDLTIGEQIGQGSCGTVYHAVWYG-SQDVAVKVFSRQEY-SDEVIHSFRQEVSLMKRLRH-PNVLLF------------ 568 (783)
Q Consensus 504 ~~~y~i~~~LG~G~fG~Vy~a~~~~-~~~vAiK~i~~~~~-~~~~~~~~~~Ei~il~~l~H-pnIv~l------------ 568 (783)
...|.+.+.||+|+||.||+|.+.. ++.||||++..... .....+.+.+|+.+++.++| +|+..+
T Consensus 77 ~~~~~~~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 156 (413)
T 3dzo_A 77 PRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDL 156 (413)
T ss_dssp CEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCCCEE
T ss_pred ceeEEEecccccCCCEEEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhccCCCHHHHHHhcccccchhh
Confidence 3568899999999999999999764 57899999874332 22335678899999999977 322111
Q ss_pred ---------eceeec-----CCceEEEEEecCCCCHHHHHh------hcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEE
Q 003963 569 ---------MGAVTS-----PQRLCIVTEFLPRGSLFRLLQ------RNTTKLDWRRRILMALDIARGVSYLHHCNPPII 628 (783)
Q Consensus 569 ---------~~~~~~-----~~~~~lV~E~~~ggsL~~~L~------~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~Iv 628 (783)
+.++.. ...++++|+++ +++|.+++. .....+++..++.++.||+.||+|||+++ ||
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~--ii 233 (413)
T 3dzo_A 157 VKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYG--LV 233 (413)
T ss_dssp EECCC---------------CCSEEEEEECC-SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHTT--EE
T ss_pred cccCCCCccccccCCCccccccceEEEeehh-cCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHHhCC--cc
Confidence 111111 22467788877 679999984 22455888899999999999999999998 99
Q ss_pred ecCCCCCCEEEcCCCcEEEEecCCCcccccccccccCCCCCCcccCcccc----------cCCCCCchhHHHHHHHHHHH
Q 003963 629 HRDLKSSNLLVDKHWTVKVGDFGLSRLKHETYLTTKTGKGTPQWMAPEVL----------RNEPSDEKSDVYSFGVILWE 698 (783)
Q Consensus 629 HrDIKp~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~~Gt~~Y~aPE~~----------~~~~~s~~sDIwSLG~il~e 698 (783)
||||||+||||+.++.+||+|||+++..... ....+| +.|+|||++ .+..++.++|||||||++|+
T Consensus 234 HrDiKp~NILl~~~~~~kL~DFG~a~~~~~~---~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~DvwSlGvil~e 309 (413)
T 3dzo_A 234 HTYLRPVDIVLDQRGGVFLTGFEHLVRDGAS---AVSPIG-RGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAIYW 309 (413)
T ss_dssp CSCCCGGGEEECTTCCEEECCGGGCEETTEE---ECCCCC-TTTCCHHHHHHHTSTTGGGCCEEECHHHHHHHHHHHHHH
T ss_pred cCCcccceEEEecCCeEEEEeccceeecCCc---cccCCC-CceeCchhhhccccccccccCcCCCchhhHHHHHHHHHH
Confidence 9999999999999999999999998765543 345577 999999999 55567889999999999999
Q ss_pred HHcCCCCCCCCChHHHHHHhhcccccccCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHH
Q 003963 699 LATEKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVD 758 (783)
Q Consensus 699 lltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~l~~LI~~cL~~dP~~RPsa~ell~ 758 (783)
|++|+.||...+...... ........+++++.+||.+||..||.+||++.++++
T Consensus 310 lltg~~Pf~~~~~~~~~~------~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~~~l~ 363 (413)
T 3dzo_A 310 IWCADLPNTDDAALGGSE------WIFRSCKNIPQPVRALLEGFLRYPKEDRLLPLQAME 363 (413)
T ss_dssp HHHSSCCCCTTGGGSCSG------GGGSSCCCCCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred HHHCCCCCCCcchhhhHH------HHHhhcccCCHHHHHHHHHHccCChhhCcCHHHHHh
Confidence 999999998765433221 122233568899999999999999999999999854
No 248
>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A
Probab=100.00 E-value=4.4e-38 Score=342.87 Aligned_cols=246 Identities=20% Similarity=0.236 Sum_probs=191.5
Q ss_pred ccccceeEeeeeccCCcEEEEEEEEeCCceEEEEEEecccC------CHHHHHHHHHHHHHHHhCC---------C----
Q 003963 502 ILWEDLTIGEQIGQGSCGTVYHAVWYGSQDVAVKVFSRQEY------SDEVIHSFRQEVSLMKRLR---------H---- 562 (783)
Q Consensus 502 ~~~~~y~i~~~LG~G~fG~Vy~a~~~~~~~vAiK~i~~~~~------~~~~~~~~~~Ei~il~~l~---------H---- 562 (783)
+..++|++.++||+|+||.||+|.+ .++.||||++..... .....+.+.+|+.+++.++ |
T Consensus 17 ~~~~~y~~~~~lG~G~~g~V~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv 95 (336)
T 2vuw_A 17 LPTEKLQRCEKIGEGVFGEVFQTIA-DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFI 95 (336)
T ss_dssp SCHHHHHTCEEEEEETTEEEEEEEE-TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBC
T ss_pred cccccchheeeecccCceEEEEEEe-CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchh
Confidence 4457899999999999999999998 567899999987542 1223357888999999886 4
Q ss_pred -------------CceeeEeceeec-------------CCceEEEEEecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHH
Q 003963 563 -------------PNVLLFMGAVTS-------------PQRLCIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARG 616 (783)
Q Consensus 563 -------------pnIv~l~~~~~~-------------~~~~~lV~E~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~a 616 (783)
|||+++++++.. .+.+|+|||||++|++.+.+.+ ..+++..++.++.||+.|
T Consensus 96 ~l~~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~--~~~~~~~~~~i~~qi~~a 173 (336)
T 2vuw_A 96 GLNSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRT--KLSSLATAKSILHQLTAS 173 (336)
T ss_dssp CEEEEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGTT--TCCCHHHHHHHHHHHHHH
T ss_pred hhcceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHHh--cCCCHHHHHHHHHHHHHH
Confidence 555555555544 6789999999999977666643 458999999999999999
Q ss_pred HHHHH-hCCCCEEecCCCCCCEEEcCCC--------------------cEEEEecCCCcccccccccccCCCCCCcccCc
Q 003963 617 VSYLH-HCNPPIIHRDLKSSNLLVDKHW--------------------TVKVGDFGLSRLKHETYLTTKTGKGTPQWMAP 675 (783)
Q Consensus 617 L~~LH-~~~~~IvHrDIKp~NILl~~~~--------------------~vkL~DFGla~~~~~~~~~~~~~~Gt~~Y~aP 675 (783)
|+||| +++ |+||||||+||||+.++ .+||+|||+++..... ..+||+.|+||
T Consensus 174 L~~lH~~~~--ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~~-----~~~gt~~y~aP 246 (336)
T 2vuw_A 174 LAVAEASLR--FEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERDG-----IVVFCDVSMDE 246 (336)
T ss_dssp HHHHHHHHC--CBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEETT-----EEECCCCTTCS
T ss_pred HHHHHHhCC--EeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCCC-----cEEEeecccCh
Confidence 99999 888 99999999999999887 8999999999866543 34789999999
Q ss_pred ccccCCCCCchhHHHHHHHH-HHHHHcCCCCCCCCChHH-HHHHhh-ccccc----ccCCCCCCHHHHHHHHHhhhhCCC
Q 003963 676 EVLRNEPSDEKSDVYSFGVI-LWELATEKIPWDNLNSMQ-VIGAVG-FMNQR----LEIPKDVDPRWAAIVESCWHSDPQ 748 (783)
Q Consensus 676 E~~~~~~~s~~sDIwSLG~i-l~elltG~~Pf~~~~~~~-~~~~i~-~~~~~----~~~~~~~s~~l~~LI~~cL~~dP~ 748 (783)
|++.+.. +.++||||||++ .+++++|..||....... ....+. ..... ...+..+++++.+||.+||++|
T Consensus 247 E~~~g~~-~~~~Diwsl~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~~L~~d-- 323 (336)
T 2vuw_A 247 DLFTGDG-DYQFDIYRLMKKENNNRWGEYHPYSNVLWLHYLTDKMLKQMTFKTKCNTPAMKQIKRKIQEFHRTMLNFS-- 323 (336)
T ss_dssp GGGCCCS-SHHHHHHHHHHHHHTTCTTSCCTHHHHHHHHHHHHHHHHTCCCSSCCCSHHHHHHHHHHHHHHHHGGGSS--
T ss_pred hhhcCCC-ccceehhhhhCCCCcccccccCCCcchhhhhHHHHhhhhhhccCcccchhhhhhcCHHHHHHHHHHhccC--
Confidence 9999877 899999998887 778899999985421111 111111 01111 1112346789999999999976
Q ss_pred CCCCHHHHHHHHHHH-HHHHhh
Q 003963 749 CRPSFQELVDKLRDL-QRQYFQ 769 (783)
Q Consensus 749 ~RPsa~ell~~L~~L-~~~~f~ 769 (783)
|+.++ | +|+||+
T Consensus 324 ---sa~e~------l~~Hp~f~ 336 (336)
T 2vuw_A 324 ---SATDL------LCQHSLFK 336 (336)
T ss_dssp ---SHHHH------HHHCGGGC
T ss_pred ---CHHHH------HhcCCCcC
Confidence 99999 6 789985
No 249
>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*
Probab=100.00 E-value=2e-37 Score=363.42 Aligned_cols=257 Identities=22% Similarity=0.257 Sum_probs=203.1
Q ss_pred ccceeEeeeeccCCcEEEEEEEEeC-CceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEeceeec------CC
Q 003963 504 WEDLTIGEQIGQGSCGTVYHAVWYG-SQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTS------PQ 576 (783)
Q Consensus 504 ~~~y~i~~~LG~G~fG~Vy~a~~~~-~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~------~~ 576 (783)
.++|++.++||+|+||.||+|.+.. ++.||||++... ........+.+|+.+++.++||||+++++++.. .+
T Consensus 13 ~grY~i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~-~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~~~~~ 91 (676)
T 3qa8_A 13 CGPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQE-LSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPND 91 (676)
T ss_dssp ----CCCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSC-CCHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCCCTTS
T ss_pred CCCeEEEEEEeeCCCeEEEEEEECCCCcEEEEEEeccc-CCHHHHHHHHHHHHHHHhCCCCCCCceeeeecccccccCCC
Confidence 4789999999999999999999754 578999998754 345566789999999999999999999998765 67
Q ss_pred ceEEEEEecCCCCHHHHHhhcC--CcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCc---EEEEecC
Q 003963 577 RLCIVTEFLPRGSLFRLLQRNT--TKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWT---VKVGDFG 651 (783)
Q Consensus 577 ~~~lV~E~~~ggsL~~~L~~~~--~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~---vkL~DFG 651 (783)
..|+|||||++++|.+++.... ..+++..++.++.||+.||+|||+.| |+||||||+|||++.++. +||+|||
T Consensus 92 ~~~LVmEy~~ggsL~~~L~~~~~~~~lse~~i~~I~~QLl~aL~yLHs~g--IVHrDLKP~NILl~~~g~~~~vKL~DFG 169 (676)
T 3qa8_A 92 LPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHENR--IIHRDLKPENIVLQPGPQRLIHKIIDLG 169 (676)
T ss_dssp SCCCEEECCSSCBHHHHHHSSSCTTCCCSSHHHHHHHHHHHHHHHHHHTT--BCCCCCCSTTEEEECCSSSCEEEECSCC
T ss_pred eEEEEEEeCCCCCHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHCC--CccCCCCHHHeEeecCCCceeEEEcccc
Confidence 7899999999999999997643 25889999999999999999999998 999999999999997664 9999999
Q ss_pred CCcccccccccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHH---------HHhh---
Q 003963 652 LSRLKHETYLTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVI---------GAVG--- 719 (783)
Q Consensus 652 la~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~elltG~~Pf~~~~~~~~~---------~~i~--- 719 (783)
++....... ......||+.|+|||++.+..++.++|||||||++|+|++|..||......... ..+.
T Consensus 170 ~a~~~~~~~-~~~~~~gt~~Y~APE~l~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~~~~~~~i~~~~~~~~~~~~ 248 (676)
T 3qa8_A 170 YAKELDQGE-LCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQPVQWHGKVREKSNEHIVVYD 248 (676)
T ss_dssp CCCBTTSCC-CCCCCCSCCTTCSSCSSCCSCCSTTHHHHHHHHHHHHHHSSCSSCCSSCHHHHSSTTCC------CCSCC
T ss_pred ccccccccc-ccccccCCcccCChHHhccCCCCchhHHHHHHHHHHHHHHCCCCCCcccchhhhhhhhhcccchhhhhhh
Confidence 998765433 233567899999999999999999999999999999999999999764332110 0000
Q ss_pred cccc------ccc----CCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhc
Q 003963 720 FMNQ------RLE----IPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQA 770 (783)
Q Consensus 720 ~~~~------~~~----~~~~~s~~l~~LI~~cL~~dP~~RPsa~ell~~L~~L~~~~f~~ 770 (783)
.... ..+ ++..+++.+.+||.+||..||.+|||+.++ +.|+||+.
T Consensus 249 ~l~g~~~~~~~lp~p~~l~~~ls~~L~dLI~~mL~~DP~kRPTa~el------L~hp~F~~ 303 (676)
T 3qa8_A 249 DLTGAVKFSSVLPTPNHLSGILAGKLERWLQCMLMWHQRQRGTDPQN------PNVGCFQA 303 (676)
T ss_dssp CCSSSCCCCSSSCCSCCCCGGGHHHHHHHHHHHSCSSCC---CCTTC------CCCTTHHH
T ss_pred hhccccccccccCCchhhchhhhHHHHHHHHHHccCCHhhCcCHHHH------hcCHHHHH
Confidence 0000 111 222356889999999999999999999997 45566544
No 250
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=100.00 E-value=1.7e-36 Score=361.79 Aligned_cols=247 Identities=22% Similarity=0.311 Sum_probs=200.7
Q ss_pred cccccceeEeeeeccCCcEEEEEEEEe--CCceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEeceeecCCc-
Q 003963 501 EILWEDLTIGEQIGQGSCGTVYHAVWY--GSQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQR- 577 (783)
Q Consensus 501 e~~~~~y~i~~~LG~G~fG~Vy~a~~~--~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~- 577 (783)
+...++|++.++||+|+||.||++.+. .++.||||++.... .......+.+|+.+++.++|||||++++++...+.
T Consensus 76 ~~~~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~ 154 (681)
T 2pzi_A 76 DIVAGQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSG-DAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRH 154 (681)
T ss_dssp CEETTTEEEEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSSC-CHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTT
T ss_pred CEeCCceEEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccC-CHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCC
Confidence 455689999999999999999999986 46789999986543 44556788899999999999999999999987665
Q ss_pred ----eEEEEEecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCC
Q 003963 578 ----LCIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLS 653 (783)
Q Consensus 578 ----~~lV~E~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla 653 (783)
.||||||++|++|.+++.. .+++..++.++.||+.||.|||++| ||||||||+||||+.+ .+||+|||++
T Consensus 155 ~~~~~~lv~E~~~g~~L~~~~~~---~l~~~~~~~~~~qi~~aL~~lH~~g--iiHrDlkp~NIll~~~-~~kl~DFG~a 228 (681)
T 2pzi_A 155 GDPVGYIVMEYVGGQSLKRSKGQ---KLPVAEAIAYLLEILPALSYLHSIG--LVYNDLKPENIMLTEE-QLKLIDLGAV 228 (681)
T ss_dssp SCEEEEEEEECCCCEECC----C---CCCHHHHHHHHHHHHHHHHHHHHTT--EECCCCSGGGEEECSS-CEEECCCTTC
T ss_pred CCceeEEEEEeCCCCcHHHHHhC---CCCHHHHHHHHHHHHHHHHHHHHCC--CeecccChHHeEEeCC-cEEEEecccc
Confidence 7999999999999988754 5899999999999999999999998 9999999999999886 9999999999
Q ss_pred cccccccccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhcccccccCCCCCCH
Q 003963 654 RLKHETYLTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDP 733 (783)
Q Consensus 654 ~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~ 733 (783)
+..... ....||+.|+|||++.+.. +.++|||||||+||+|++|.+||....... . ........+++
T Consensus 229 ~~~~~~----~~~~gt~~y~aPE~~~~~~-~~~sDi~slG~~l~~l~~g~~~~~~~~~~~-------~-~~~~~~~~~~~ 295 (681)
T 2pzi_A 229 SRINSF----GYLYGTPGFQAPEIVRTGP-TVATDIYTVGRTLAALTLDLPTRNGRYVDG-------L-PEDDPVLKTYD 295 (681)
T ss_dssp EETTCC----SCCCCCTTTSCTTHHHHCS-CHHHHHHHHHHHHHHHHSCCCEETTEECSS-------C-CTTCHHHHHCH
T ss_pred hhcccC----CccCCCccccCHHHHcCCC-CCceehhhhHHHHHHHHhCCCCCccccccc-------c-cccccccccCH
Confidence 765443 3557999999999987764 899999999999999999999886421100 0 00000012357
Q ss_pred HHHHHHHHhhhhCCCCCC-CHHHHHHHHHHHHHHH
Q 003963 734 RWAAIVESCWHSDPQCRP-SFQELVDKLRDLQRQY 767 (783)
Q Consensus 734 ~l~~LI~~cL~~dP~~RP-sa~ell~~L~~L~~~~ 767 (783)
.+.+||.+||..||.+|| ++.++...|..+....
T Consensus 296 ~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~~~~~ 330 (681)
T 2pzi_A 296 SYGRLLRRAIDPDPRQRFTTAEEMSAQLTGVLREV 330 (681)
T ss_dssp HHHHHHHHHTCSSGGGSCSSHHHHHHHHHHHHHHH
T ss_pred HHHHHHhhhccCChhhCCCHHHHHHHHHHHHHHHh
Confidence 899999999999999999 5677777777665443
No 251
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.95 E-value=1.1e-29 Score=296.20 Aligned_cols=186 Identities=16% Similarity=0.098 Sum_probs=132.1
Q ss_pred eeeccCCcEEEEEEEE-eCCceEEEEEEecccC--------CHHHHHHHHHHHHHHHhC-CCCceeeEeceeecCCceEE
Q 003963 511 EQIGQGSCGTVYHAVW-YGSQDVAVKVFSRQEY--------SDEVIHSFRQEVSLMKRL-RHPNVLLFMGAVTSPQRLCI 580 (783)
Q Consensus 511 ~~LG~G~fG~Vy~a~~-~~~~~vAiK~i~~~~~--------~~~~~~~~~~Ei~il~~l-~HpnIv~l~~~~~~~~~~~l 580 (783)
...+.|++|.+..++. ..++.|++|++.+... .....+.|.+|+++|+++ .|+||+++++++++++.+||
T Consensus 240 ~~~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~~~yL 319 (569)
T 4azs_A 240 NQPYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENAQSGWL 319 (569)
T ss_dssp CC-C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEECSSEEEE
T ss_pred hccccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEECCEEEE
Confidence 3567788887777653 3467899999976532 123456799999999999 69999999999999999999
Q ss_pred EEEecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCccccccc
Q 003963 581 VTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETY 660 (783)
Q Consensus 581 V~E~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~ 660 (783)
|||||+|++|.++|... .+++.. .|+.||+.||+|||++| ||||||||+||||+.+|.|||+|||+|+......
T Consensus 320 VMEyv~G~~L~d~i~~~-~~l~~~---~I~~QIl~AL~ylH~~G--IIHRDIKPeNILL~~dg~vKL~DFGlAr~~~~~~ 393 (569)
T 4azs_A 320 VMEKLPGRLLSDMLAAG-EEIDRE---KILGSLLRSLAALEKQG--FWHDDVRPWNVMVDARQHARLIDFGSIVTTPQDC 393 (569)
T ss_dssp EEECCCSEEHHHHHHTT-CCCCHH---HHHHHHHHHHHHHHHTT--CEESCCCGGGEEECTTSCEEECCCTTEESCC---
T ss_pred EEecCCCCcHHHHHHhC-CCCCHH---HHHHHHHHHHHHHHHCC--ceeccCchHhEEECCCCCEEEeecccCeeCCCCC
Confidence 99999999999999864 456654 47889999999999999 9999999999999999999999999998766554
Q ss_pred ccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCC
Q 003963 661 LTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEK 703 (783)
Q Consensus 661 ~~~~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~elltG~ 703 (783)
....+.+||+.|||||++.+. +..++|+|++|+++++|+++.
T Consensus 394 ~~~~t~vGTp~YmAPE~l~g~-~~~~~d~~s~g~~~~~l~~~~ 435 (569)
T 4azs_A 394 SWPTNLVQSFFVFVNELFAEN-KSWNGFWRSAPVHPFNLPQPW 435 (569)
T ss_dssp CCSHHHHHHHHHHHHHHC------------------CCCCTTH
T ss_pred ccccCceechhhccHHHhCCC-CCCcccccccccchhhhcccc
Confidence 444566799999999999875 567899999999988776553
No 252
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=99.92 E-value=5.5e-26 Score=263.34 Aligned_cols=186 Identities=18% Similarity=0.189 Sum_probs=146.1
Q ss_pred eEeeeeccCCcEEEEEEEEeCCceEEEEEEecccCCH------HHHHHHHHHHHHHHhCCCCceeeEeceeecCCceEEE
Q 003963 508 TIGEQIGQGSCGTVYHAVWYGSQDVAVKVFSRQEYSD------EVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIV 581 (783)
Q Consensus 508 ~i~~~LG~G~fG~Vy~a~~~~~~~vAiK~i~~~~~~~------~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lV 581 (783)
...++||+|+||.||++. ..++.+++|++....... ...+.+.+|+.+|+.++||||+++..++...+..|||
T Consensus 339 ~~~~~LG~G~fg~Vy~~~-~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lV 417 (540)
T 3en9_A 339 IPEHLIGKGAEADIKRDS-YLDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVDLDNKRIM 417 (540)
T ss_dssp ---------CCEEEEEEE-CSSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEETTTTEEE
T ss_pred CCCCEEeeCCCEEEEEEE-ECCCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEeCCccEEE
Confidence 446789999999999994 345689999876544321 1245689999999999999999666666677788999
Q ss_pred EEecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCcccccccc
Q 003963 582 TEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETYL 661 (783)
Q Consensus 582 ~E~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~~ 661 (783)
||||++++|.+++.. ++.++.||+.||.|||+++ |+||||||+|||++. .+||+|||+++.......
T Consensus 418 mE~~~ggsL~~~l~~---------~~~i~~qi~~aL~~LH~~g--IiHrDiKp~NILl~~--~~kL~DFGla~~~~~~~~ 484 (540)
T 3en9_A 418 MSYINGKLAKDVIED---------NLDIAYKIGEIVGKLHKND--VIHNDLTTSNFIFDK--DLYIIDFGLGKISNLDED 484 (540)
T ss_dssp EECCCSEEHHHHSTT---------CTHHHHHHHHHHHHHHHTT--EECTTCCTTSEEESS--SEEECCCTTCEECCCHHH
T ss_pred EECCCCCCHHHHHHH---------HHHHHHHHHHHHHHHHHCc--CccCCCCHHHEEECC--eEEEEECccCEECCCccc
Confidence 999999999999875 5678999999999999998 999999999999998 999999999987654321
Q ss_pred c-------ccCCCCCCcccCcccccC--CCCCchhHHHHHHHHHHHHHcCCCCCC
Q 003963 662 T-------TKTGKGTPQWMAPEVLRN--EPSDEKSDVYSFGVILWELATEKIPWD 707 (783)
Q Consensus 662 ~-------~~~~~Gt~~Y~aPE~~~~--~~~s~~sDIwSLG~il~elltG~~Pf~ 707 (783)
. ....+||+.|||||++.+ ..|+...|+|+..+-.++.+.++-+|.
T Consensus 485 ~~~~~~~~~~~~~GT~~y~APEv~~~~~~~Y~~~~d~ws~vl~~l~~v~~r~rY~ 539 (540)
T 3en9_A 485 KAVDLIVFKKAVLSTHHEKFDEIWERFLEGYKSVYDRWEIILELMKDVERRARYV 539 (540)
T ss_dssp HHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHTCSCCC
T ss_pred cccchhhhhhhhcCCCCcCCHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhccccC
Confidence 1 234578999999999987 556778899999999888888877774
No 253
>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*
Probab=99.86 E-value=2.1e-22 Score=214.17 Aligned_cols=146 Identities=22% Similarity=0.203 Sum_probs=116.4
Q ss_pred ceeEeeeeccCCcEEEEEEEEeCCceEEEEEEecccCCH----------------HHHHHHHHHHHHHHhCCCCceeeEe
Q 003963 506 DLTIGEQIGQGSCGTVYHAVWYGSQDVAVKVFSRQEYSD----------------EVIHSFRQEVSLMKRLRHPNVLLFM 569 (783)
Q Consensus 506 ~y~i~~~LG~G~fG~Vy~a~~~~~~~vAiK~i~~~~~~~----------------~~~~~~~~Ei~il~~l~HpnIv~l~ 569 (783)
.|.+++.||+|+||.||+|.+..++.||||++....... .....+.+|+.+++.++ | ++++
T Consensus 91 ~~~~~~~iG~G~~g~Vy~~~~~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l~--~-~~v~ 167 (282)
T 1zar_A 91 VDAIGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQ--G-LAVP 167 (282)
T ss_dssp CSEEEEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTT--T-SSSC
T ss_pred EEEecCEeccCCCceEEEEEeCCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhcc--C-CCcC
Confidence 456779999999999999999557789999986533211 23567889999999999 5 6666
Q ss_pred ceeecCCceEEEEEecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEe
Q 003963 570 GAVTSPQRLCIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGD 649 (783)
Q Consensus 570 ~~~~~~~~~~lV~E~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~D 649 (783)
+++.. +..|+|||||+|++|.+ +.. .....++.||+.||.|||++| |+||||||+||||+ ++.+||+|
T Consensus 168 ~~~~~-~~~~lvmE~~~g~~L~~-l~~-------~~~~~i~~qi~~~l~~lH~~g--iiHrDlkp~NILl~-~~~vkl~D 235 (282)
T 1zar_A 168 KVYAW-EGNAVLMELIDAKELYR-VRV-------ENPDEVLDMILEEVAKFYHRG--IVHGDLSQYNVLVS-EEGIWIID 235 (282)
T ss_dssp CEEEE-ETTEEEEECCCCEEGGG-CCC-------SCHHHHHHHHHHHHHHHHHTT--EECSCCSTTSEEEE-TTEEEECC
T ss_pred eEEec-cceEEEEEecCCCcHHH-cch-------hhHHHHHHHHHHHHHHHHHCC--CEeCCCCHHHEEEE-CCcEEEEE
Confidence 65543 56799999999999988 422 123468999999999999999 99999999999999 99999999
Q ss_pred cCCCcccccccccccCCCCCCcccCccccc
Q 003963 650 FGLSRLKHETYLTTKTGKGTPQWMAPEVLR 679 (783)
Q Consensus 650 FGla~~~~~~~~~~~~~~Gt~~Y~aPE~~~ 679 (783)
||+++. +..|+|||.+.
T Consensus 236 FG~a~~-------------~~~~~a~e~l~ 252 (282)
T 1zar_A 236 FPQSVE-------------VGEEGWREILE 252 (282)
T ss_dssp CTTCEE-------------TTSTTHHHHHH
T ss_pred CCCCeE-------------CCCCCHHHHHH
Confidence 999852 34478888863
No 254
>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*
Probab=99.78 E-value=3.8e-19 Score=186.49 Aligned_cols=139 Identities=19% Similarity=0.220 Sum_probs=107.8
Q ss_pred ceeEeeeeccCCcEEEEEEEE-eCCce--EEEEEEecccCC----------------------HHHHHHHHHHHHHHHhC
Q 003963 506 DLTIGEQIGQGSCGTVYHAVW-YGSQD--VAVKVFSRQEYS----------------------DEVIHSFRQEVSLMKRL 560 (783)
Q Consensus 506 ~y~i~~~LG~G~fG~Vy~a~~-~~~~~--vAiK~i~~~~~~----------------------~~~~~~~~~Ei~il~~l 560 (783)
-|.+.+.||+|+||.||+|.+ ..++. ||||++...... ......+.+|+.+|+.+
T Consensus 48 ~~~i~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l 127 (258)
T 1zth_A 48 ITAMGGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERA 127 (258)
T ss_dssp EEEEEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHHH
T ss_pred chhhCCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHHH
Confidence 378899999999999999998 56778 999997543211 01224678899999999
Q ss_pred CCCce--eeEeceeecCCceEEEEEecCC-C----CHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHH-hCCCCEEecCC
Q 003963 561 RHPNV--LLFMGAVTSPQRLCIVTEFLPR-G----SLFRLLQRNTTKLDWRRRILMALDIARGVSYLH-HCNPPIIHRDL 632 (783)
Q Consensus 561 ~HpnI--v~l~~~~~~~~~~~lV~E~~~g-g----sL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH-~~~~~IvHrDI 632 (783)
.|++| +.++.+ ...+|||||+.+ | +|.++... .++..+..++.||+.+|.||| ++| ||||||
T Consensus 128 ~~~~i~~p~~~~~----~~~~lVmE~~g~~g~~~~~L~~~~~~----~~~~~~~~i~~qi~~~l~~lH~~~g--ivHrDl 197 (258)
T 1zth_A 128 KEAGVSVPQPYTY----MKNVLLMEFIGEDELPAPTLVELGRE----LKELDVEGIFNDVVENVKRLYQEAE--LVHADL 197 (258)
T ss_dssp HHTTCCCCCEEEE----ETTEEEEECCEETTEECCBHHHHGGG----GGGSCHHHHHHHHHHHHHHHHHTSC--EECSSC
T ss_pred HhCCCCCCeEEEc----CCCEEEEEecCCCCCccccHHHHhhc----cChHHHHHHHHHHHHHHHHHHHHCC--EEeCCC
Confidence 88754 344432 367899999942 3 67666432 234567789999999999999 988 999999
Q ss_pred CCCCEEEcCCCcEEEEecCCCccc
Q 003963 633 KSSNLLVDKHWTVKVGDFGLSRLK 656 (783)
Q Consensus 633 Kp~NILl~~~~~vkL~DFGla~~~ 656 (783)
||+|||++. .++|+|||++...
T Consensus 198 kp~NILl~~--~~~liDFG~a~~~ 219 (258)
T 1zth_A 198 SEYNIMYID--KVYFIDMGQAVTL 219 (258)
T ss_dssp STTSEEESS--SEEECCCTTCEET
T ss_pred CHHHEEEcC--cEEEEECcccccC
Confidence 999999998 9999999999643
No 255
>2gj3_A Nitrogen fixation regulatory protein; PAS domain, FAD, redox sensor, atomic resolution, transferase; HET: FAD; 1.04A {Azotobacter vinelandii}
Probab=99.77 E-value=3.1e-18 Score=156.05 Aligned_cols=118 Identities=20% Similarity=0.320 Sum_probs=107.0
Q ss_pred CHHHHHHHHHHhCcceEEEcCCCcEEEecHHHHHHcCCChhhHcCCCccccccccccchHHHHHHHHHHhCCeEEEEEEE
Q 003963 128 TDRQYLNILQSMGQSVHIFDLSDRIIYWNRSAELLYGYSAEEALGQDAIELLTDGRDFDVAYDIVHRIKMGERWTGQFPA 207 (783)
Q Consensus 128 ~~~~~~~ile~~~d~I~i~D~~G~Ii~~N~aae~L~Gys~eEllG~~~~~l~~~~~~~~~~~~l~~~l~~g~~~~~e~~~ 207 (783)
.++.|+.++++++++|+++|.+|+|+|+|++|++++||+.+|++|+++..+.++.........++..+..+..+..++..
T Consensus 3 ~~~~~~~~~~~~~~~i~~~d~~g~i~~~N~a~~~~~G~~~~elig~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~e~~~ 82 (120)
T 2gj3_A 3 LPEIFRQTVEHAPIAISITDLKANILYANRAFRTITGYGSEEVLGKNESILSNGTTPRLVYQALWGRLAQKKPWSGVLVN 82 (120)
T ss_dssp CHHHHHHHHHHCSSEEEEECTTCBEEEECHHHHHHHCCCTTGGGGCBGGGGCCTTSCHHHHHHHHHHHHTTCCEEEEEEE
T ss_pred hHHHHHHHHHhCCCeEEEECCCCCEEeehHHHHHHHCcCHHHHcCCCHHHcCCCCCCHHHHHHHHHHHHcCCCEEEEEEE
Confidence 45789999999999999999999999999999999999999999999998877665544455677888889999999999
Q ss_pred EcCCCCEEEEEEEEEEEECCCCCEEEEEEEEEehHHHH
Q 003963 208 KTKTEERVLVVATNTPFYDDDGTLVGIVCVSTDSRPFQ 245 (783)
Q Consensus 208 ~~kdG~~~~v~~~~~Pi~d~~G~v~g~v~i~rDITerk 245 (783)
+++||..+|+.+++.|++|.+|++.+++++++|||++|
T Consensus 83 ~~~dG~~~~~~~~~~pi~~~~g~~~~~v~~~~DITe~k 120 (120)
T 2gj3_A 83 RRKDKTLYLAELTVAPVLNEAGETIYYLGMHRDTSELH 120 (120)
T ss_dssp ECTTSCEEEEEEEEEEEECTTSCEEEEEEEEEECCSCC
T ss_pred EcCCCCEEEEEEEEEEEECCCCCEEEEEEEeccCcccC
Confidence 99999999999999999999999999999999999864
No 256
>4hia_A LOV protein; PAS, HTH, signaling protein; HET: FMN; 1.95A {Rhodobacter sphaeroides} PDB: 4hnb_A* 4hj4_A* 4hj6_A* 4hj3_A*
Probab=99.76 E-value=2.4e-18 Score=167.19 Aligned_cols=121 Identities=13% Similarity=0.131 Sum_probs=113.3
Q ss_pred HHHHHHHHHhCcceEEEcCC---CcEEEecHHHHHHcCCChhhHcCCCccccccccccchHHHHHHHHHHhCCeEEEEEE
Q 003963 130 RQYLNILQSMGQSVHIFDLS---DRIIYWNRSAELLYGYSAEEALGQDAIELLTDGRDFDVAYDIVHRIKMGERWTGQFP 206 (783)
Q Consensus 130 ~~~~~ile~~~d~I~i~D~~---G~Ii~~N~aae~L~Gys~eEllG~~~~~l~~~~~~~~~~~~l~~~l~~g~~~~~e~~ 206 (783)
+.++.++++++++|+++|.+ |+|+|+|++|++++||+.++++|+++..++++.........+...+..+..+..++.
T Consensus 7 ~~~~~~~~~~~~~i~~~d~~~~~g~i~~~N~a~~~~~G~~~~e~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~ 86 (176)
T 4hia_A 7 EKIRAVFDRSGVALTLVDMSLPEQPVVLANPPFLRMTGYTEGQILGFNCRFLQRGDENAQARADIRDALKLGRELQVVLR 86 (176)
T ss_dssp HHHHHHHHHCSSCCEEEETTSTTCCEEEECHHHHHHHTCCHHHHTTSCGGGGCCTTCCHHHHHHHHHHHHHTCCEEEEEE
T ss_pred HHHHHHHhcCCCcEEEEecCCCCCcEEEECHHHHHHHCcCHHHHcCCCcceeeCCCCCHHHHHHHHHHHHcCCceEEEEE
Confidence 56889999999999999999 999999999999999999999999999998887766666778888999999999999
Q ss_pred EEcCCCCEEEEEEEEEEEECCCCCEEEEEEEEEehHHHHHHHHH
Q 003963 207 AKTKTEERVLVVATNTPFYDDDGTLVGIVCVSTDSRPFQETRAA 250 (783)
Q Consensus 207 ~~~kdG~~~~v~~~~~Pi~d~~G~v~g~v~i~rDITerk~~E~~ 250 (783)
.+++||..+|+.+++.|+++.+|.+.+++++++|||++|++|++
T Consensus 87 ~~~~dG~~~~~~~~~~pi~~~~g~~~~~~~~~~DITe~k~~e~~ 130 (176)
T 4hia_A 87 NYRANDEPFDNLLFLHPVGGRPDAPDYFLGSQFELGRSGNSEEA 130 (176)
T ss_dssp EECTTCCEEEEEEEEEEESSBTTBCSEEEEEEEEESSSGGGHHH
T ss_pred EEcCCCCEEEEEEEEEEeeCCCCCeEEEEEEEEECcHhhHHHHH
Confidence 99999999999999999999999999999999999999999988
No 257
>2pr5_A Blue-light photoreceptor; light-oxygen-voltage, LOV, PER-ARNT-SIM, PAS, flavoprotein, protein; HET: FMN; 1.45A {Bacillus subtilis} PDB: 2pr6_A*
Probab=99.75 E-value=1.3e-17 Score=154.46 Aligned_cols=123 Identities=22% Similarity=0.166 Sum_probs=105.3
Q ss_pred HHHHHHhCcceEEEcCCC---cEEEecHHHHHHcCCChhhHcCCCccccccccccchHHHHHHHHHHhCCeEEEEEEEEc
Q 003963 133 LNILQSMGQSVHIFDLSD---RIIYWNRSAELLYGYSAEEALGQDAIELLTDGRDFDVAYDIVHRIKMGERWTGQFPAKT 209 (783)
Q Consensus 133 ~~ile~~~d~I~i~D~~G---~Ii~~N~aae~L~Gys~eEllG~~~~~l~~~~~~~~~~~~l~~~l~~g~~~~~e~~~~~ 209 (783)
+.++++++++|+++|.+| +|+|+|++|++++||+.+|++|+++..+.++.........+...+..+..+..++..++
T Consensus 2 ~~~~~~~~~~i~~~d~~g~~~~i~~~N~a~~~~~G~~~~el~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~ 81 (132)
T 2pr5_A 2 SHMLDHVRVGVVITDPALEDNPIVYVNQGFVQMTGYETEEILGKNCRFLQGKHTDPAEVDNIRTALQNKEPVTVQIQNYK 81 (132)
T ss_dssp ----CCCCCEEEEECTTSTTCCEEEECHHHHHHHSCCHHHHTTSCGGGGCCTTCCHHHHHHHHHHHHHTCCEEEEEEEEC
T ss_pred hhHHhcCCCcEEEEeCCCCCCcEEEECHHHHHHhCcCHHHHcCCChhhhCCCCCCHHHHHHHHHHHHcCCCeEEEEEEEe
Confidence 357899999999999976 99999999999999999999999998877666554445567778888888999999999
Q ss_pred CCCCEEEEEEEEEEEECCCCCEEEEEEEEEehHHHHHHHHHHHHhhcc
Q 003963 210 KTEERVLVVATNTPFYDDDGTLVGIVCVSTDSRPFQETRAALWDTKNS 257 (783)
Q Consensus 210 kdG~~~~v~~~~~Pi~d~~G~v~g~v~i~rDITerk~~E~~L~~~~~~ 257 (783)
+||..+|+.+++.|+.+.+ +.+++++++|||++|++|++|++...+
T Consensus 82 kdG~~~~~~~~~~~~~~~~--~~~~~~~~~DITe~k~~e~~l~~~~~~ 127 (132)
T 2pr5_A 82 KDGTMFWNELNIDPMEIED--KTYFVGIQNDITKQKEYEKLLEDSLTE 127 (132)
T ss_dssp TTSCEEEEEEEEEEEEETT--EEEEEEEEEECHHHHHHHHHHHHHHHH
T ss_pred cCCCeeeeEEEEEeccCCC--eeEEEEEEEeCcHHHHHHHHHHHHHHH
Confidence 9999999999999998765 889999999999999999999876554
No 258
>3p7n_A Sensor histidine kinase; LOV domain, light-activated transcription factor, DNA bindin; HET: FMN; 2.10A {Erythrobacter litoralis}
Probab=99.72 E-value=6.4e-17 Score=168.40 Aligned_cols=122 Identities=18% Similarity=0.181 Sum_probs=107.2
Q ss_pred CCCCHHHHHHHHHHhCcceEEEcC---CCcEEEecHHHHHHcCCChhhHcCCCccccccccccchHHHHHHHHHHhCCeE
Q 003963 125 FNFTDRQYLNILQSMGQSVHIFDL---SDRIIYWNRSAELLYGYSAEEALGQDAIELLTDGRDFDVAYDIVHRIKMGERW 201 (783)
Q Consensus 125 ~~~~~~~~~~ile~~~d~I~i~D~---~G~Ii~~N~aae~L~Gys~eEllG~~~~~l~~~~~~~~~~~~l~~~l~~g~~~ 201 (783)
+...++.|+.++++++++|+++|. +|+|+|||++|++++||+.+|++|+++.+++++.........+...+..+..+
T Consensus 58 l~~~~~~~~~i~~~~~~~i~~~d~~~~~g~i~~~N~a~~~l~G~~~~el~g~~~~~l~~~~~~~~~~~~~~~~l~~~~~~ 137 (258)
T 3p7n_A 58 VQPPAQWVLDLIEASPIASVVSDPRLADNPLIAINQAFTDLTGYSEEECVGRNCRFLAGSGTEPWLTDKIRQGVREHKPV 137 (258)
T ss_dssp ---CCHHHHHHHHTCSSEEEEECTTSTTCCEEEECHHHHHHHCCCGGGTTTSCGGGGCCTTCCHHHHHHHHHHHHHTCCE
T ss_pred HHhHHHHHHHHHhcCCccEEEEcCCCCCCcEEEEhHHHHHHcCCCHHHHCCCChhhccCCCCchhHHHHHHHHHHcCCCe
Confidence 445568899999999999999999 89999999999999999999999999999988877766667788889999999
Q ss_pred EEEEEEEcCCCCEEEEEEEEEEEECCCCCEEEEEEEEEehHHHHH
Q 003963 202 TGQFPAKTKTEERVLVVATNTPFYDDDGTLVGIVCVSTDSRPFQE 246 (783)
Q Consensus 202 ~~e~~~~~kdG~~~~v~~~~~Pi~d~~G~v~g~v~i~rDITerk~ 246 (783)
..++..+++||..+|+.+++.|++|.+|.+.+++++++|||++|+
T Consensus 138 ~~e~~~~~~dG~~~~~~~~~~pi~d~~g~~~~~v~~~~DITerk~ 182 (258)
T 3p7n_A 138 LVEILNYKKDGTPFRNAVLVAPIYDDDDELLYFLGSQVEVDDDQP 182 (258)
T ss_dssp EEEEEEECTTSCEEEEEEEEEEEECTTSCSEEEEEEEEEC-----
T ss_pred EEEEEEEcCCCCEEEEeeEEEEEEcCCCCEEEEEEEeeecchhhh
Confidence 999999999999999999999999999999999999999999943
No 259
>1n9l_A PHOT-LOV1, putative blue light receptor; phototropin, flavin, electron transport; HET: FMN; 1.90A {Chlamydomonas reinhardtii} SCOP: d.110.3.6 PDB: 1n9n_A* 1n9o_A*
Probab=99.72 E-value=6.2e-17 Score=145.46 Aligned_cols=105 Identities=23% Similarity=0.287 Sum_probs=95.9
Q ss_pred hCcceEEEcC---CCcEEEecHHHHHHcCCChhhHcCCCccccccccccchHHHHHHHHHHhCCeEEEEEEEEcCCCCEE
Q 003963 139 MGQSVHIFDL---SDRIIYWNRSAELLYGYSAEEALGQDAIELLTDGRDFDVAYDIVHRIKMGERWTGQFPAKTKTEERV 215 (783)
Q Consensus 139 ~~d~I~i~D~---~G~Ii~~N~aae~L~Gys~eEllG~~~~~l~~~~~~~~~~~~l~~~l~~g~~~~~e~~~~~kdG~~~ 215 (783)
++++|+++|. +|+|+|+|++|++|+||+.+|++|+++..+.++.........+++++..++.+..++..++|||+.+
T Consensus 2 ~~~~i~i~d~~~~~g~i~~~N~a~~~l~Gy~~~e~~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~kdG~~~ 81 (109)
T 1n9l_A 2 LRHTFVVADATLPDCPLVYASEGFYAMTGYGPDEVLGHNCRFLQGEGTDPKEVQKIRDAIKKGEACSVRLLNYRKDGTPF 81 (109)
T ss_dssp CSCEEEEEETTSTTCCEEEECHHHHHHHCCCHHHHTTSCGGGGCCTTCCHHHHHHHHHHHHHTCCEEEEEEEECTTSCEE
T ss_pred CccEEEEEcCCCCCCeEEEEchHHHHHHCcCHHHHcCCCchhcCCCCCCHHHHHHHHHHHHcCCcEEEEEEEEcCCCCEE
Confidence 6789999994 7999999999999999999999999988887766655556678889999999999999999999999
Q ss_pred EEEEEEEEEECCCCCEEEEEEEEEehHH
Q 003963 216 LVVATNTPFYDDDGTLVGIVCVSTDSRP 243 (783)
Q Consensus 216 ~v~~~~~Pi~d~~G~v~g~v~i~rDITe 243 (783)
|+.+++.|++|++|++.+++++++|||+
T Consensus 82 ~~~~~~~pi~d~~G~~~~~v~~~~DITe 109 (109)
T 1n9l_A 82 WNLLTVTPIKTPDGRVSKFVGVQVDVTS 109 (109)
T ss_dssp EEEEEEEEEECTTSCEEEEEEEEEECCC
T ss_pred EEEEEEEEEECCCCCEEEEEEEEEeCCC
Confidence 9999999999999999999999999984
No 260
>3ue6_A Aureochrome1; PAS/LOV domain, FMN-binding blue-light photoreceptor, signal protein; HET: FMN; 2.75A {Vaucheria frigida} PDB: 3ulf_A*
Probab=99.70 E-value=2.6e-16 Score=150.16 Aligned_cols=126 Identities=20% Similarity=0.134 Sum_probs=114.2
Q ss_pred CCHHHHHHHHHHhCcceEEEcC---CCcEEEecHHHHHHcCCChhhHcCCCccccccccccchHHHHHHHHHHhCCeEEE
Q 003963 127 FTDRQYLNILQSMGQSVHIFDL---SDRIIYWNRSAELLYGYSAEEALGQDAIELLTDGRDFDVAYDIVHRIKMGERWTG 203 (783)
Q Consensus 127 ~~~~~~~~ile~~~d~I~i~D~---~G~Ii~~N~aae~L~Gys~eEllG~~~~~l~~~~~~~~~~~~l~~~l~~g~~~~~ 203 (783)
...+.++.++++++++|+++|. +|+|+++|++|++++||+.++++|+++..++++.........+...+..+..+..
T Consensus 32 ~~~~~~~~~~~~~~~~i~~~d~~~~~g~i~~~N~~~~~l~G~~~~e~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 111 (166)
T 3ue6_A 32 DPDYSLVKALQMAQQNFVITDASLPDNPIVYASRGFLTLTGYSLDQILGRNCRFLQGPETDPRAVDKIRNAITKGVDTSV 111 (166)
T ss_dssp CCCCHHHHHHHHTTSCEEEEETTSTTCCEEEECHHHHHHHCCCHHHHTTSCGGGGCCTTSCHHHHHHHHHHHHHTCCEEE
T ss_pred HHHHHHHHHHhcCCceEEEEEccCCCCcEEEECHHHHHHhCcCHHHHcCCCHhheeCCCCCHHHHHHHHHHHhcCCceEE
Confidence 3446799999999999999999 7999999999999999999999999999888877766666677888889999999
Q ss_pred EEEEEcCCCCEEEEEEEEEEEECCCCCEEEEEEEEEehHHHHHHHHHHH
Q 003963 204 QFPAKTKTEERVLVVATNTPFYDDDGTLVGIVCVSTDSRPFQETRAALW 252 (783)
Q Consensus 204 e~~~~~kdG~~~~v~~~~~Pi~d~~G~v~g~v~i~rDITerk~~E~~L~ 252 (783)
++...+++|..+|+.+++.|+.+.+|.+.|++++++|||++|+++...+
T Consensus 112 e~~~~~~~g~~~~~~~~~~~i~~~~g~~~~~~~~~~DITe~k~~~~~~e 160 (166)
T 3ue6_A 112 CLLNYRQDGTTFWNLFFVAGLRDSKGNIVNYVGVQSKVSEDYAKLLVNE 160 (166)
T ss_dssp EEEEECTTSCEEEEEEEEEEEECTTSCEEEEEEECCBCCHHHHHHHHHH
T ss_pred EEEEEcCCCCEEEEEEEEEeeeCCCCCEEEEEEEEEechHHHHHHHHHh
Confidence 9999999999999999999999999999999999999999998876643
No 261
>3sw1_A Sensory box protein; light-oxygen-voltage, LOV, PAS, signaling protein; HET: FMN; 2.63A {Pseudomonas putida}
Probab=99.69 E-value=5.9e-16 Score=147.30 Aligned_cols=134 Identities=19% Similarity=0.153 Sum_probs=121.0
Q ss_pred CCCCHHHHHHHHHHhCcceEEEcCCC---cEEEecHHHHHHcCCChhhHcCCCccccccccccchHHHHHHHHHHhCCeE
Q 003963 125 FNFTDRQYLNILQSMGQSVHIFDLSD---RIIYWNRSAELLYGYSAEEALGQDAIELLTDGRDFDVAYDIVHRIKMGERW 201 (783)
Q Consensus 125 ~~~~~~~~~~ile~~~d~I~i~D~~G---~Ii~~N~aae~L~Gys~eEllG~~~~~l~~~~~~~~~~~~l~~~l~~g~~~ 201 (783)
.....+.++.++++++++|+++|.+| +|+++|+++++++||+.++++|+++..++++.........+...+..+..+
T Consensus 20 ~~~~~~~~~~i~~~~~~~i~~~d~~~~~~~i~~~N~~~~~~~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (162)
T 3sw1_A 20 HMINAQLLQSMVDASNDGIVVAEKEGDDTILIYVNAAFEYLTGYSRDEILYQDCRFLQGDDRDQLGRARIRKAMAEGRPC 99 (162)
T ss_dssp -CCCHHHHHHHHHTCSSEEEEEEEETTEEEEEEECHHHHHHHTCCHHHHTTSBGGGGTTTCCCCHHHHHHHHHHHHTCCE
T ss_pred ccchHHHHHHHHhhccCcEEEEeCCCCccEEEEECHHHHHHHCCCHHHHcCCCcceecCCCcCHHHHHHHHHHHhcCCCC
Confidence 34567899999999999999999999 999999999999999999999999999888776666666788888999999
Q ss_pred EEEEEEEcCCCCEEEEEEEEEEEECCCCCEEEEEEEEEehHHHHHHHHHHHHhhccc
Q 003963 202 TGQFPAKTKTEERVLVVATNTPFYDDDGTLVGIVCVSTDSRPFQETRAALWDTKNSD 258 (783)
Q Consensus 202 ~~e~~~~~kdG~~~~v~~~~~Pi~d~~G~v~g~v~i~rDITerk~~E~~L~~~~~~~ 258 (783)
..++...+++|..+|+.+++.|+.+.+|.+.+++++++|||++++++++|+......
T Consensus 100 ~~~~~~~~~~g~~~~~~~~~~~i~~~~g~~~~~~~~~~DiTe~k~~e~~l~~~~~~l 156 (162)
T 3sw1_A 100 REVLRNYRKDGSAFWNELSITPVKSDFDQRTYFIGIQKDVSRQVELERELAELRARP 156 (162)
T ss_dssp EEEEEEECTTCCEEEEEEEEEEEECSSSSCEEEEEEEEECHHHHHHHHHHHHHTC--
T ss_pred cceEEEECCCCCEEEEEEEEEEeecCCCCEEEEEEEEEeCcHHHHHHHHHHHHHHHH
Confidence 989999999999999999999999999999999999999999999999998876653
No 262
>3t50_A Blue-light-activated histidine kinase; PAS superfamily, blue-light photoreceptor, FMN binding, TRAN; HET: FMN; 1.64A {Brucella melitensis}
Probab=99.68 E-value=2.1e-16 Score=143.99 Aligned_cols=119 Identities=19% Similarity=0.143 Sum_probs=103.4
Q ss_pred HHHHhCcceEEEcC---CCcEEEecHHHHHHcCCChhhHcCCCccccccccccchHHHHHHHHHHhCCeEEEEEEEEcCC
Q 003963 135 ILQSMGQSVHIFDL---SDRIIYWNRSAELLYGYSAEEALGQDAIELLTDGRDFDVAYDIVHRIKMGERWTGQFPAKTKT 211 (783)
Q Consensus 135 ile~~~d~I~i~D~---~G~Ii~~N~aae~L~Gys~eEllG~~~~~l~~~~~~~~~~~~l~~~l~~g~~~~~e~~~~~kd 211 (783)
++++++++|+++|. +|+|+++|++|++++||+.++++|+++..++++.........+...+..+..+..++...+++
T Consensus 2 ~~~~~~~~i~~~d~~~~~g~i~~~N~~~~~l~g~~~~e~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~ 81 (128)
T 3t50_A 2 ASEFTLMPMLITNPHLPDNPIVFANPAFLKLTGYEADEVMGRNCRFLQGHGTDPAHVRAIKSAIAAEKPIDIDIINYKKS 81 (128)
T ss_dssp CCCCCSSCEEEECTTSTTCCEEEECHHHHHHHCCCHHHHTTSCGGGGCCTTSCHHHHHHHHHHHHTTCCEEEEEEEECTT
T ss_pred ccccCcccEEEecCCCCCCcEEEEcHHHHHHhCcCHHHHcCCCHhhhcCCccCHHHHHHHHHHHHcCCCceeEEEEEcCC
Confidence 46788999999999 999999999999999999999999999998887766666667788888899899999999999
Q ss_pred CCEEEEEEEEEEEECCCCCEEEEEEEEEehHHHHHHHHHHHH
Q 003963 212 EERVLVVATNTPFYDDDGTLVGIVCVSTDSRPFQETRAALWD 253 (783)
Q Consensus 212 G~~~~v~~~~~Pi~d~~G~v~g~v~i~rDITerk~~E~~L~~ 253 (783)
|..+|+.+++.|+.+.+|.+.+++++++|||++|++|++..+
T Consensus 82 g~~~~~~~~~~~i~~~~g~~~~~~~~~~DITe~k~~e~~~~~ 123 (128)
T 3t50_A 82 GEAFWNRLHISPVHNANGRLQHFVSSQLDVTLELVPRGSLEH 123 (128)
T ss_dssp CCEEEEEEEEEEEECTTSCEEEEEEEEEECHHHHC-------
T ss_pred CCEEEEEEEEEEEECCCCCEEEEEEEEEEcchhhhhhhhhhh
Confidence 999999999999999999999999999999999999888654
No 263
>3k3c_A Protein RV1364C/MT1410; sensor, PAS, signal transduction, fatty-acid binding, sigma regulator, signaling protein; HET: PLM; 1.62A {Mycobacterium tuberculosis} PDB: 3k3d_A
Probab=99.66 E-value=8.9e-16 Score=146.01 Aligned_cols=128 Identities=15% Similarity=0.131 Sum_probs=108.9
Q ss_pred CHHHHHHHHHHhCcceEEEc-CCCcEEEecHHHHHHcCCChhhHcCCCccccccccccchHHHHHHHHHHhCCeEEEE-E
Q 003963 128 TDRQYLNILQSMGQSVHIFD-LSDRIIYWNRSAELLYGYSAEEALGQDAIELLTDGRDFDVAYDIVHRIKMGERWTGQ-F 205 (783)
Q Consensus 128 ~~~~~~~ile~~~d~I~i~D-~~G~Ii~~N~aae~L~Gys~eEllG~~~~~l~~~~~~~~~~~~l~~~l~~g~~~~~e-~ 205 (783)
..+.|+.++++++++|+++| .+|+|+++|+++++++|++ +++|+++.+++++.........+.+++..|++...+ .
T Consensus 15 ~~~~~~~~~~~~~~~i~~~d~~~~~i~~~N~~~~~~~g~~--~~~G~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 92 (158)
T 3k3c_A 15 AAEDVRRIFEHIPAILVGLEGPDHRFVAVNAAYRGFSPLL--DTVGQPAREVYPELEGQQIYEMLDRVYQTGEPQSGSEW 92 (158)
T ss_dssp CHHHHHHHHHHCSSEEEEEETTTTEEEEECHHHHHHCTTC--CSTTSBHHHHSGGGGGTTHHHHHHHHHHHCCCEEEEEE
T ss_pred HHHHHHHHHhcCCceEEEEECCCcEeHHHHHHHHHHcCCc--hhcCCcHHHhCCchhHHHHHHHHHHHHHhCCcccccce
Confidence 45789999999999999999 9999999999999999999 999999999998776555556677888888875443 2
Q ss_pred EE--EcC-C-CCEEEEEEEEEEEECCCCCEEEEEEEEEehHHHHHHHHHHHHhhcc
Q 003963 206 PA--KTK-T-EERVLVVATNTPFYDDDGTLVGIVCVSTDSRPFQETRAALWDTKNS 257 (783)
Q Consensus 206 ~~--~~k-d-G~~~~v~~~~~Pi~d~~G~v~g~v~i~rDITerk~~E~~L~~~~~~ 257 (783)
.. .+. + |..+|+.++..|+++.+|.+.|++++++|||++|++|++|+....+
T Consensus 93 ~~~~~~~~~~g~~~~~~~~~~pi~~~~g~~~g~~~~~~DITe~k~~e~~l~~~~~~ 148 (158)
T 3k3c_A 93 RLQTDYDGSGVEERYFDFVVTPRRRADGSIEGVQLIVDDVTSRVRARQAAEARVEE 148 (158)
T ss_dssp EEEEESSSSCEEEEEEEEEEEEEECTTSCEEEEEEEEEECHHHHHHHHHHHHHHHH
T ss_pred eEEeccCCCCcceEEEEEEEEEeECCCCCEEEEEEEEEehhHHHHHHHHHHHHHHH
Confidence 22 232 3 7789999999999999999999999999999999999999765544
No 264
>3f1p_B ARYL hydrocarbon receptor nuclear translocator; PAS domain, heterodimer, internal cavity, activator, angiogenesis, congenital erythrocytosis; 1.17A {Homo sapiens} SCOP: d.110.3.0 PDB: 3f1o_B* 3f1n_B 3h7w_B* 3h82_B* 1x0o_A 2hv1_A 4h6j_B 2b02_A* 2k7s_A 2a24_B
Probab=99.66 E-value=1.2e-16 Score=145.29 Aligned_cols=117 Identities=13% Similarity=0.192 Sum_probs=98.2
Q ss_pred HHHHHHHHHhCcceEEEcCCCcEEEecHHHHHHcCCChhhHcCCCccccccccccchHHHHHHHHHH-hCCeEEEEEEEE
Q 003963 130 RQYLNILQSMGQSVHIFDLSDRIIYWNRSAELLYGYSAEEALGQDAIELLTDGRDFDVAYDIVHRIK-MGERWTGQFPAK 208 (783)
Q Consensus 130 ~~~~~ile~~~d~I~i~D~~G~Ii~~N~aae~L~Gys~eEllG~~~~~l~~~~~~~~~~~~l~~~l~-~g~~~~~e~~~~ 208 (783)
+++..+++++++.|+++|.+|+|+|+|+++++++||+++|++|+++.++++|++.......+...+. .+..+..+++++
T Consensus 2 ~~~~ll~e~~~d~i~~~d~~g~i~~~n~~~~~~~G~~~~el~g~~~~~~i~p~d~~~~~~~~~~~~~~~~~~~~~e~r~~ 81 (121)
T 3f1p_B 2 EFKGLNVCQPTRFISRHNIEGIFTFVDHRCVATVGYQPQELLGKNIVEFCHPEDQQLLRDSFQQVVKLKGQVLSVMFRFR 81 (121)
T ss_dssp ------CCCCCEEEEEECTTSBEEEECTTHHHHHSCCGGGTTTSBGGGGBCTTTHHHHHHHHHHHTTSTTCCEEEEEEEE
T ss_pred CcccceecCCCceEEEECCCceEEEECcchhhhhCCChHHHcCCCHHHeECHHHHHHHHHHHHHHHhcCCCcccEEEEEE
Confidence 4567789999999999999999999999999999999999999999999998886555555666664 455688899999
Q ss_pred cCCCCEEEEEEEEEEEECC-CCCEEEEEEEEEehHHHHH
Q 003963 209 TKTEERVLVVATNTPFYDD-DGTLVGIVCVSTDSRPFQE 246 (783)
Q Consensus 209 ~kdG~~~~v~~~~~Pi~d~-~G~v~g~v~i~rDITerk~ 246 (783)
++||..+|+..+..|++|. +|++.+++++.+|||++|+
T Consensus 82 ~~dG~~~w~~~~~~~~~~~~~g~~~~iv~~~~DIT~~kq 120 (121)
T 3f1p_B 82 SKNQEWLWMRTSSFTFQNPYSDEIEYIICTNTNVKNSSQ 120 (121)
T ss_dssp CTTSCEEEEEEEEEEECCTTCCCCCEEEEEEEECCCC--
T ss_pred ecCCCEEEEEEEEEEEECCCCCceeEEEEEeEEcccccC
Confidence 9999999999999999987 7899999999999999875
No 265
>2vv6_A FIXL, sensor protein FIXL; signaling protein, transferase, phosphoprotein, nitrogen FIX PER-ARNT-SIM, metal-binding, PAS, iron, heme; HET: HEM; 1.5A {Bradyrhizobium japonicum} PDB: 1xj6_A* 1xj4_A* 2vv7_A* 2vv8_A* 1lsw_A* 1dp8_A* 1dp9_A* 1drm_A* 1lsv_A* 1dp6_A* 1lsx_A* 1lt0_A* 1y28_A* 2cmn_A* 1xj3_A* 1xj2_A* 2owh_A* 2owj_A*
Probab=99.65 E-value=7.8e-16 Score=139.62 Aligned_cols=113 Identities=17% Similarity=0.140 Sum_probs=81.1
Q ss_pred hCcceEEEcCCCcEEEecHHHHHHcCCChhhHcCCCccccccccccchHHHHHHHHHHhCCe----EEEEEEEEcCCCCE
Q 003963 139 MGQSVHIFDLSDRIIYWNRSAELLYGYSAEEALGQDAIELLTDGRDFDVAYDIVHRIKMGER----WTGQFPAKTKTEER 214 (783)
Q Consensus 139 ~~d~I~i~D~~G~Ii~~N~aae~L~Gys~eEllG~~~~~l~~~~~~~~~~~~l~~~l~~g~~----~~~e~~~~~kdG~~ 214 (783)
++++|+++|.+|+|+++|++|++|+||+.+|++|+++..++++.........+......+.. ...++..+++||+.
T Consensus 2 ~~d~i~~~d~~g~i~~~N~a~~~l~G~~~~el~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dG~~ 81 (119)
T 2vv6_A 2 IPDAMIVIDGHGIIQLFSTAAERLFGWSELEAIGQNVNILMPEPDRSRHDSYISRYRTTSDPHIIGIGRIVTGKRRDGTT 81 (119)
T ss_dssp CCCEEEEEETTSBEEEECHHHHHHHCCCHHHHTTSBGGGGSCTTHHHHHHHHHHHHHHHCCCSSTTTCEEEEEECTTSCE
T ss_pred CcceEEEECCCCeEEEEhHHHHHHhCCCHHHHcCCCHHHhCCchHHHHHHHHHHHHhcCCCcccCCCceEEEEEeCCCCE
Confidence 67899999999999999999999999999999999999887765433222333444444443 23466778999999
Q ss_pred EEEEEEEEEEECCCCCEEEEEEEEEehHHHHHHHHHHHH
Q 003963 215 VLVVATNTPFYDDDGTLVGIVCVSTDSRPFQETRAALWD 253 (783)
Q Consensus 215 ~~v~~~~~Pi~d~~G~v~g~v~i~rDITerk~~E~~L~~ 253 (783)
+|+.+++.|+.+.+ ..+++++++|||++|++|++|++
T Consensus 82 ~~~~~~~~~~~~~~--~~~~~~~~~DITerk~~e~~l~~ 118 (119)
T 2vv6_A 82 FPMHLSIGEMQSGG--EPYFTGFVRDLTEHQQTQARLQE 118 (119)
T ss_dssp EEEEEEEEEEEETT--EEEEEEEEEECC-----------
T ss_pred EEEEEEEEEEEECC--eEEEEEEEEEcHHHHHHHHHHHh
Confidence 99999999998643 35689999999999999998864
No 266
>3mr0_A Sensory box histidine kinase/response regulator; PAS fold, structural genomics, PSI-2; HET: PG5; 1.49A {Burkholderia thailandensis}
Probab=99.64 E-value=2.3e-15 Score=141.53 Aligned_cols=133 Identities=9% Similarity=0.170 Sum_probs=113.9
Q ss_pred CCCCHHHHHHHHHHhCcceEEEcCCCcEEEecHHHHHHcCCChhhHcC--CCccccccccccchHHHHHHHHHHhCCeEE
Q 003963 125 FNFTDRQYLNILQSMGQSVHIFDLSDRIIYWNRSAELLYGYSAEEALG--QDAIELLTDGRDFDVAYDIVHRIKMGERWT 202 (783)
Q Consensus 125 ~~~~~~~~~~ile~~~d~I~i~D~~G~Ii~~N~aae~L~Gys~eEllG--~~~~~l~~~~~~~~~~~~l~~~l~~g~~~~ 202 (783)
+..+++.|+.+++.++++++.+|.++.++++|+++++++||+.+++.+ ..+..+++|++.......+..++..+..+.
T Consensus 4 L~~se~rl~~~~~~~~~g~w~~d~~~~~~~~s~~~~~~~G~~~~~~~~~~~~~~~~ihpdD~~~~~~~~~~~~~~~~~~~ 83 (142)
T 3mr0_A 4 LSASEERFQLAVSGASAGLWDWNPKTGAMYLSPHFKKIMGYEDHELPDEITGHRESIHPDDRARVLAALKAHLEHRDTYD 83 (142)
T ss_dssp -----CCHHHHHHHTTCEEEEECTTTCCEEECHHHHHHTTCCGGGSCSEEC---CCBCTTTHHHHHHHHHHHHHHCCCEE
T ss_pred HHHHHHHHHHHHHhCCcEEEEEEcCCCeEEECHHHHHHhCCCccccCCCHHHHHhhcCHHHHHHHHHHHHHHHhCCCceE
Confidence 445567799999999999999999999999999999999999999877 345677888887666667778888888899
Q ss_pred EEEEEEcCCCCEEEEEEEEEEEECCCCCEEEEEEEEEehHHHHHHHHHHHHhhcc
Q 003963 203 GQFPAKTKTEERVLVVATNTPFYDDDGTLVGIVCVSTDSRPFQETRAALWDTKNS 257 (783)
Q Consensus 203 ~e~~~~~kdG~~~~v~~~~~Pi~d~~G~v~g~v~i~rDITerk~~E~~L~~~~~~ 257 (783)
.+++++++||..+|+.....|++|.+|++.+++++++|||++|++|++|+...+.
T Consensus 84 ~e~r~~~~~G~~~w~~~~~~~~~d~~g~~~~~~G~~~DITerk~~E~~L~~~~~~ 138 (142)
T 3mr0_A 84 VEYRVRTRSGDFRWIQSRGQALWNSAGEPYRMVGWIMDVTDRKRDEDALRVSREE 138 (142)
T ss_dssp EEEEEECTTSCEEEEEEEEEEEECTTSCEEEEEEEEEECHHHHHHHHHHHHHHHH
T ss_pred EEEEEECCCCCEEEEEEEEEEEECCCCCEEEEEEEEEcCchHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999876543
No 267
>4eet_B Phototropin-2; LOV, blue light photoreceptor, signaling protein, flavoprote; HET: FMN; 1.20A {Arabidopsis thaliana} PDB: 4ees_A* 4eer_A* 4eep_A* 4eeu_A* 1jnu_A* 1g28_A*
Probab=99.63 E-value=1.8e-15 Score=133.93 Aligned_cols=110 Identities=24% Similarity=0.197 Sum_probs=98.9
Q ss_pred HHHHhCcceEEEcC---CCcEEEecHHHHHHcCCChhhHcCCCccccccccccchHHHHHHHHHHhCCeEEEEEEEEcCC
Q 003963 135 ILQSMGQSVHIFDL---SDRIIYWNRSAELLYGYSAEEALGQDAIELLTDGRDFDVAYDIVHRIKMGERWTGQFPAKTKT 211 (783)
Q Consensus 135 ile~~~d~I~i~D~---~G~Ii~~N~aae~L~Gys~eEllG~~~~~l~~~~~~~~~~~~l~~~l~~g~~~~~e~~~~~kd 211 (783)
.+++++++|+++|. +|+|+|+|+++++++||+.++++|+++..++++.........+...+..+..+..++...+++
T Consensus 2 ~l~~~~~~i~~~d~~~~~g~i~~~N~~~~~~~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (115)
T 4eet_B 2 SPEFIEKNFVITDPRLPDNPIIFASDGFLELTEYSREEILGRNARFLQGPETDQATVQKIRDAIRDQRETTVQLINYTKS 81 (115)
T ss_dssp ---CCCCSEEEECTTSTTCCEEEECHHHHHHHCCCHHHHTTSCGGGGCCTTSCHHHHHHHHHHHHTTCCEEEEEEEECTT
T ss_pred ccccCCCcEEEEcCCCCCCcEEEEcHHHHHHHCcCHHHHhCCCHHHhcCCCCChHHHHHHHHHHHcCCCcceEEEEecCC
Confidence 47889999999999 999999999999999999999999999888877766556667788888999888899999999
Q ss_pred CCEEEEEEEEEEEECCCCCEEEEEEEEEehHHH
Q 003963 212 EERVLVVATNTPFYDDDGTLVGIVCVSTDSRPF 244 (783)
Q Consensus 212 G~~~~v~~~~~Pi~d~~G~v~g~v~i~rDITer 244 (783)
|..+|+.+++.|+.+.+|.+.+++++++|||++
T Consensus 82 g~~~~~~~~~~~~~~~~g~~~~~~~~~~DITer 114 (115)
T 4eet_B 82 GKKFWNLLHLQPVRDQKGELQYFIGVQLDGSDH 114 (115)
T ss_dssp CCEEEEEEEEEEEECTTSCEEEEEEEEEECSCC
T ss_pred CCEEEEEEEEEEEECCCCCEEEEEEEEEeeccc
Confidence 999999999999999999999999999999975
No 268
>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A
Probab=99.63 E-value=4.5e-16 Score=171.05 Aligned_cols=136 Identities=16% Similarity=0.144 Sum_probs=99.3
Q ss_pred eeEeeeeccCCcEEEEEEEEeCCceEEEEEEecccC---------------CH-H----HHHHHHHHHHHHHhCCCCcee
Q 003963 507 LTIGEQIGQGSCGTVYHAVWYGSQDVAVKVFSRQEY---------------SD-E----VIHSFRQEVSLMKRLRHPNVL 566 (783)
Q Consensus 507 y~i~~~LG~G~fG~Vy~a~~~~~~~vAiK~i~~~~~---------------~~-~----~~~~~~~Ei~il~~l~HpnIv 566 (783)
|.++++||.|+||.||+|.+..++.||||+++.... .. . ......+|...|.++.+.++.
T Consensus 97 Y~I~~~IG~Gk~a~VY~a~d~~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~rL~~~gv~ 176 (397)
T 4gyi_A 97 YSVGSRIGVGKESDIMIVADEKGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMKALYEEGFP 176 (397)
T ss_dssp SEEEEEEEECSSEEEEEEECTTCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHHHHHHTTCS
T ss_pred EEecCEeeeCCceEEEEEECCCCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 899999999999999999988888999999753211 00 0 011223566677777544432
Q ss_pred --eEeceeecCCceEEEEEecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEEcCCC-
Q 003963 567 --LFMGAVTSPQRLCIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHW- 643 (783)
Q Consensus 567 --~l~~~~~~~~~~~lV~E~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl~~~~- 643 (783)
..++. ...+|||||++|++|.++... .....++.||+.+|.+||++| ||||||||.||||++++
T Consensus 177 vp~p~~~----~~~~LVME~i~G~~L~~l~~~-------~~~~~l~~qll~~l~~lH~~g--IVHrDLKp~NILl~~dgd 243 (397)
T 4gyi_A 177 VPEPIAQ----SRHTIVMSLVDALPMRQVSSV-------PDPASLYADLIALILRLAKHG--LIHGDFNEFNILIREEKD 243 (397)
T ss_dssp CCCEEEE----ETTEEEEECCSCEEGGGCCCC-------SCHHHHHHHHHHHHHHHHHTT--EECSCCSTTSEEEEEEEC
T ss_pred CCeeeec----cCceEEEEecCCccHhhhccc-------HHHHHHHHHHHHHHHHHHHCC--CcCCCCCHHHEEEeCCCC
Confidence 22221 234799999999888665421 123457789999999999998 99999999999998876
Q ss_pred ---------cEEEEecCCCcc
Q 003963 644 ---------TVKVGDFGLSRL 655 (783)
Q Consensus 644 ---------~vkL~DFGla~~ 655 (783)
.+.|+||+-+..
T Consensus 244 ~~d~~~~~~~~~iID~~Q~V~ 264 (397)
T 4gyi_A 244 AEDPSSITLTPIIIXFPQMVS 264 (397)
T ss_dssp SSCTTSEEEEEEECCCTTCEE
T ss_pred cccccccccceEEEEeCCccc
Confidence 389999997643
No 269
>3mqq_A Transcriptional regulator, LUXR family; PAS domain, PSI, MCSG, structural genomics, center for structural genomics; 1.65A {Burkholderia thailandensis} PDB: 3mqo_A
Probab=99.63 E-value=6.2e-16 Score=140.32 Aligned_cols=114 Identities=11% Similarity=0.074 Sum_probs=94.1
Q ss_pred HHHHHHHhCcceEEEcCCCcEEEecHHHHHHcCCChhhHcCCCcccccccccc-chHHHHHHHHHHhCCeEEEEEEEEcC
Q 003963 132 YLNILQSMGQSVHIFDLSDRIIYWNRSAELLYGYSAEEALGQDAIELLTDGRD-FDVAYDIVHRIKMGERWTGQFPAKTK 210 (783)
Q Consensus 132 ~~~ile~~~d~I~i~D~~G~Ii~~N~aae~L~Gys~eEllG~~~~~l~~~~~~-~~~~~~l~~~l~~g~~~~~e~~~~~k 210 (783)
|+.+|++++++|+ +|.+|+|+++|++|++|+||+.++++|+++..++++... ......+...+..+..+..+...+++
T Consensus 5 ~~~~~~~~~~~i~-~~~~g~i~~~N~a~~~l~G~~~~el~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ 83 (120)
T 3mqq_A 5 YKTAFHLAPIGLV-LSRDRVIEDCNDELAAIFRCARADLIGRSFEVLYPSSDEFERIGERISPVMIAHGSYADDRIMKRA 83 (120)
T ss_dssp HHHHHHHCSSEEE-EEETTEEEEECHHHHHHTTSCHHHHTTCBGGGGSSSHHHHHHHHHHHHHHHHHHSCEEEEEEEECT
T ss_pred HHHHHhcCCceEE-EecCCEEHHHHHHHHHHhCcCHHHhCCCchhhccCChhhHHHHHHHHHHHHhcCCcceEEEEEEeC
Confidence 8999999999996 588999999999999999999999999999888765433 22333456667778888889999999
Q ss_pred CCCEEEEEEEEEEEECCCCCEEEEEEEEEehHHHHHH
Q 003963 211 TEERVLVVATNTPFYDDDGTLVGIVCVSTDSRPFQET 247 (783)
Q Consensus 211 dG~~~~v~~~~~Pi~d~~G~v~g~v~i~rDITerk~~ 247 (783)
||..+|+.++..|+ +.+|...+++++++|||++|++
T Consensus 84 dG~~~~~~~~~~~~-~~~~~~~~~v~~~~DITerk~~ 119 (120)
T 3mqq_A 84 GGELFWCHVTGRAL-DRTAPLAAGVWTFEDLSATRRV 119 (120)
T ss_dssp TSCEEEEEEEEEES-STTSTTSSEEEEEEESCC----
T ss_pred CCCEEEEEEEEEEC-CCCCCceeEEEEEEcccHhhcc
Confidence 99999999999998 5666677899999999999976
No 270
>3f1p_A Endothelial PAS domain-containing protein 1; PAS domain, heterodimer, internal cavity, activator, angiogenesis, congenital erythrocytosis; 1.17A {Homo sapiens} SCOP: d.110.3.7 PDB: 3f1o_A* 3f1n_A 3h7w_A* 3h82_A* 1p97_A 2a24_A 4h6j_A
Probab=99.62 E-value=8e-16 Score=138.74 Aligned_cols=108 Identities=19% Similarity=0.228 Sum_probs=97.8
Q ss_pred hCcceEEEcCCCcEEEecHHHHHHcCCChhhHcCCCccccccccccchHHHHHHHHHHhCCeEEEEEEEEcCCCCEEEEE
Q 003963 139 MGQSVHIFDLSDRIIYWNRSAELLYGYSAEEALGQDAIELLTDGRDFDVAYDIVHRIKMGERWTGQFPAKTKTEERVLVV 218 (783)
Q Consensus 139 ~~d~I~i~D~~G~Ii~~N~aae~L~Gys~eEllG~~~~~l~~~~~~~~~~~~l~~~l~~g~~~~~e~~~~~kdG~~~~v~ 218 (783)
.++.|+++|.+|+|+|+|+++++++||+++|++|+++.++++|++.......+...+..+..+..+++++++||..+|+.
T Consensus 8 ~~~~i~~~d~~g~i~~~n~~~~~~~Gy~~~el~g~~~~~~~~p~d~~~~~~~~~~~~~~~~~~~~e~r~~~~dG~~~w~~ 87 (117)
T 3f1p_A 8 SKTFLSEHSMDMKFTYCDDRITELIGYHPEELLGRSAYEFYHALDSENMTKSHQNLCTKGQVVSGQYRMLAKHGGYVWLE 87 (117)
T ss_dssp GGEEEEEECTTCBEEEECTHHHHHHCCCHHHHTTSBGGGGBCGGGHHHHHHHHHHHHHHSEEECCCEEEECTTSSEEEEE
T ss_pred CccEEEEECCCceEEEECcChhhhhCCCHHHHcCCchhheECHHHHHHHHHHHHHHHhCCCeeeeEEEEEecCCCEEEEE
Confidence 46788899999999999999999999999999999999999988876666667778888888888999999999999999
Q ss_pred EEEEEEECC-CCCEEEEEEEEEehHHHHH
Q 003963 219 ATNTPFYDD-DGTLVGIVCVSTDSRPFQE 246 (783)
Q Consensus 219 ~~~~Pi~d~-~G~v~g~v~i~rDITerk~ 246 (783)
++..|++|. +|.+.+++++.+|||++|+
T Consensus 88 ~~~~~~~d~~~g~~~~iv~~~~DITer~~ 116 (117)
T 3f1p_A 88 TQGTVIYNPRNLQPQCIMCVNYVLSEIEK 116 (117)
T ss_dssp EEEEEEEETTTTEEEEEEEEEEECSCCBC
T ss_pred EeeEEEECCCCCCceEEEEEeeecccccc
Confidence 999999987 8999999999999998864
No 271
>3lyx_A Sensory BOX/ggdef domain protein; structural genomics, PSI- 2, protein structure initiative, northeast structural genomics consortium; 2.00A {Colwellia psychrerythraea}
Probab=99.62 E-value=4.1e-15 Score=131.93 Aligned_cols=120 Identities=23% Similarity=0.410 Sum_probs=105.3
Q ss_pred CHHHHHHHHHHhCcceEEEcCCCcEEEecHHHHHHcCCChhhHcCCCccccccccccchHHHHHHHHHHhCCeEEEEEEE
Q 003963 128 TDRQYLNILQSMGQSVHIFDLSDRIIYWNRSAELLYGYSAEEALGQDAIELLTDGRDFDVAYDIVHRIKMGERWTGQFPA 207 (783)
Q Consensus 128 ~~~~~~~ile~~~d~I~i~D~~G~Ii~~N~aae~L~Gys~eEllG~~~~~l~~~~~~~~~~~~l~~~l~~g~~~~~e~~~ 207 (783)
..+.++.++++++++|+++|.+|+|+++|+++++++|++.++++|+++..++++.........+...+..+..+..+...
T Consensus 5 ~~~~~~~~~~~~~~~i~~~d~~~~i~~~N~~~~~~~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (124)
T 3lyx_A 5 ILKQRAKAFDYVFDAIVVTDLQGFIIDWNKGSETLYGYSKEQAIGQPVNMLHVPGDTEHITSEVISAVENQGKWTGEIRM 84 (124)
T ss_dssp HHHHHHHGGGTCSSEEEEEETTCBEEEECHHHHHHHCCCHHHHTTSBGGGGSCTTTHHHHHHHHHHHHHHTSCEEEEEEE
T ss_pred HHHHHHHHHhhcCceEEEECCCCcEeehhhHHHHHhCCCHHHHcCCCHHHhcCcchhhHHHHHHHHHHHcCCcccceEEE
Confidence 35778999999999999999999999999999999999999999999996666555444455677888889988889999
Q ss_pred EcCCCCEEEEEEEEEEEECCCCCEEEEEEEEEehHHHHHH
Q 003963 208 KTKTEERVLVVATNTPFYDDDGTLVGIVCVSTDSRPFQET 247 (783)
Q Consensus 208 ~~kdG~~~~v~~~~~Pi~d~~G~v~g~v~i~rDITerk~~ 247 (783)
..++|..+|+.++..|+.+.+|.+.|++++++|||++|++
T Consensus 85 ~~~~g~~~~~~~~~~~~~~~~g~~~~~~~~~~Dit~~~~l 124 (124)
T 3lyx_A 85 LHKDGHIGWIESMCVPIYGENYQMVGALGINRDITKRKKE 124 (124)
T ss_dssp ECTTSCEEEEEEEEEEEECSTTCEEEEEEEEEECSCC---
T ss_pred EccCCCEEEEEEEEEEEECCCCCEEEEEEEEecchhhhcC
Confidence 9999999999999999999999999999999999998753
No 272
>2r78_A Sensor protein; sensory box sensor histidine kinase/response regulator, structural genomics, PSI, MCSG; 1.60A {Geobacter sulfurreducens pca}
Probab=99.62 E-value=4.1e-15 Score=135.13 Aligned_cols=114 Identities=19% Similarity=0.198 Sum_probs=92.2
Q ss_pred CcCCCCHHHHHHHHHHhCcceEEEcCCCcEEEecHHHHHHcCCChhhHcCCCccccccccccchHHHHHHHHHHhCCeEE
Q 003963 123 SAFNFTDRQYLNILQSMGQSVHIFDLSDRIIYWNRSAELLYGYSAEEALGQDAIELLTDGRDFDVAYDIVHRIKMGERWT 202 (783)
Q Consensus 123 ~a~~~~~~~~~~ile~~~d~I~i~D~~G~Ii~~N~aae~L~Gys~eEllG~~~~~l~~~~~~~~~~~~l~~~l~~g~~~~ 202 (783)
..+..+++.|+.++++++++|+++|.+|+|+++|+++++|+||+++|++|+++..+.++.. ......+...+..+..+.
T Consensus 4 ~~l~~se~~~~~l~e~~~d~i~~~d~~g~i~~vN~a~~~l~Gy~~~el~g~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 82 (117)
T 2r78_A 4 ENLYFQSNAYRALFEHAIDGIFIMDAEGHYLDVNPAICSAIGYTRDEFLALDWGVLSRGVD-SGWAAASLARIVGGEPLR 82 (117)
T ss_dssp CSHHHHHHHHHHHHHHCSSEEEEECTTSBEEEECHHHHHHHCCCHHHHTTCBTTTTTTCST-TSHHHHHHHHHHTTCCEE
T ss_pred hHHHHhHHHHHHHHhcCCceEEEECCCCCEEEecHHHHHHHCcCHHHHcCCCHHHhCCccc-hhHHHHHHHHHHcCCcEE
Confidence 3445567889999999999999999999999999999999999999999999876644332 222334556677777788
Q ss_pred EEEEEEcCCCCEEEEEEEEEEEECCCCCEEEEEEEEEehH
Q 003963 203 GQFPAKTKTEERVLVVATNTPFYDDDGTLVGIVCVSTDSR 242 (783)
Q Consensus 203 ~e~~~~~kdG~~~~v~~~~~Pi~d~~G~v~g~v~i~rDIT 242 (783)
.+.+.+++||+.+|+.+++.|+. +|+ ++++++|||
T Consensus 83 ~e~~~~~kdG~~~~v~~~~~~~~--~g~---~~~i~~DIT 117 (117)
T 2r78_A 83 EERTVWTRNGDQLTVELSAHLLP--DGK---ILGIARDVS 117 (117)
T ss_dssp EEEEEECTTSCEEEEEEEEEECT--TSC---EEEEEEC--
T ss_pred EEEEEEecCCCEEEEEEEEEEec--CCe---EEEEEEeCC
Confidence 88899999999999999999985 566 567899997
No 273
>2z6d_A Phototropin-2; PAS-fold, LOV-fold, alternative splicing, ATP-binding, chromophore, flavoprotein, FMN, kinase, membrane, nucleotide-binding; HET: FMN; 2.00A {Arabidopsis thaliana} PDB: 2z6c_A*
Probab=99.62 E-value=5.8e-15 Score=131.86 Aligned_cols=122 Identities=20% Similarity=0.278 Sum_probs=105.9
Q ss_pred HHHHHHHHHHhCcceEEEc---CCCcEEEecHHHHHHcCCChhhHcCCCccccccccccchHHHHHHHHHHhCCeEEEEE
Q 003963 129 DRQYLNILQSMGQSVHIFD---LSDRIIYWNRSAELLYGYSAEEALGQDAIELLTDGRDFDVAYDIVHRIKMGERWTGQF 205 (783)
Q Consensus 129 ~~~~~~ile~~~d~I~i~D---~~G~Ii~~N~aae~L~Gys~eEllG~~~~~l~~~~~~~~~~~~l~~~l~~g~~~~~e~ 205 (783)
++.++.++++++++|+++| .+|+|+++|+++++++|++.++++|+++..++++.........+...+..+..+..++
T Consensus 5 ~~~~~~~~~~~~~~i~~~d~~d~~~~i~~~N~~~~~~~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (130)
T 2z6d_A 5 SQELKTALSTLQQTFVVSDATQPHCPIVYASSGFFTMTGYSSKEIVGRNCRFLQGPDTDKNEVAKIRDCVKNGKSYCGRL 84 (130)
T ss_dssp --CHHHHHHHTTCEEEEEETTSTTCCEEEECHHHHHHHCCCHHHHTTSCGGGGCCTTSCHHHHHHHHHHHHTTCCEEEEE
T ss_pred HHHHHHHHHhcccceeeeeccCCCCcEEEecHHHHHHhCcCHHHHcCCChhhccCCCCCchHHHHHHHHHHcCCcceeEE
Confidence 3568999999999999999 9999999999999999999999999999988887665555666778888888888888
Q ss_pred EEEcCCCCEEEEEEEEEEEECCCCCEEEEEEEEEehHHHHHHHHH
Q 003963 206 PAKTKTEERVLVVATNTPFYDDDGTLVGIVCVSTDSRPFQETRAA 250 (783)
Q Consensus 206 ~~~~kdG~~~~v~~~~~Pi~d~~G~v~g~v~i~rDITerk~~E~~ 250 (783)
...+++|..+|+.+...|+.+.+|.+.+++++++|||+++++|++
T Consensus 85 ~~~~~~g~~~~~~~~~~~~~~~~g~~~~~~~~~~Dit~~~~~e~e 129 (130)
T 2z6d_A 85 LNYKKDGTPFWNLLTVTPIKDDQGNTIKFIGMQVEVSKYTEGVND 129 (130)
T ss_dssp EEECTTSCEEEEEEEEEEEECTTSCEEEEEEEEEECCTTC-----
T ss_pred EEEcCCCcEEEEEEEEEEEECCCCCeeEEEEEEecchHHHHhhcc
Confidence 888999999999999999999999999999999999999987653
No 274
>3ewk_A Sensor protein; PAS domain, alpha/beta fold, kinase, phosphoprotein, transfe flavoprotein; HET: FAD; 2.34A {Methylococcus capsulatus}
Probab=99.60 E-value=5.8e-15 Score=150.70 Aligned_cols=112 Identities=28% Similarity=0.351 Sum_probs=102.6
Q ss_pred eEEEcCCCcEEEecHHHHHHcCCChhhHcCCCccccccccccchHHHHHHHHHHhCCeEEEEEEEEcCCCCEEEEEEEEE
Q 003963 143 VHIFDLSDRIIYWNRSAELLYGYSAEEALGQDAIELLTDGRDFDVAYDIVHRIKMGERWTGQFPAKTKTEERVLVVATNT 222 (783)
Q Consensus 143 I~i~D~~G~Ii~~N~aae~L~Gys~eEllG~~~~~l~~~~~~~~~~~~l~~~l~~g~~~~~e~~~~~kdG~~~~v~~~~~ 222 (783)
|+++|.+|+|++||++|++|+||+++|++|+++..+.++.........++..+..+..+..++..+++||+.+|+.+++.
T Consensus 2 i~i~D~~g~i~~~N~a~~~l~Gy~~~el~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~dG~~~~~~~~~~ 81 (227)
T 3ewk_A 2 VSITDLQGRILYANDNFCAVSRYGREELVGQDHRIVNSGYHGKAYIRDMWRTISRGNIWQGEFCNRRKDGTRYWVDSTIV 81 (227)
T ss_dssp EEEEETTCBEEEECHHHHHHTTCCHHHHTTSBGGGGCCSCSCHHHHHHHHHHHTTTCCEEEEEEEECSSSCEEEEEEEEE
T ss_pred EEEECCCCcEEehHHHHHHHHCcCHHHHcCCCHHHcCCCCCCHHHHHHHHHHHHcCCeEEEEEEEEcCCCCEEeeeeEEE
Confidence 78899999999999999999999999999999988876665555566778888999999999999999999999999999
Q ss_pred EEECCCCCEEEEEEEEEehHHHHHHHHHHHHh
Q 003963 223 PFYDDDGTLVGIVCVSTDSRPFQETRAALWDT 254 (783)
Q Consensus 223 Pi~d~~G~v~g~v~i~rDITerk~~E~~L~~~ 254 (783)
|++|.+|++.+++++++|||++|++|++|+..
T Consensus 82 p~~d~~g~~~~~~~~~~DIT~~k~~e~~l~~~ 113 (227)
T 3ewk_A 82 PLMDNAGKPRQYISIRRDITAQKEAEAQLARL 113 (227)
T ss_dssp EEECSSSCEEEEEEEEEECTTTTHHHHHHHHH
T ss_pred EEEcCCCCEEEEEEEEEehhhHHHHHHHHHHH
Confidence 99999999999999999999999999998654
No 275
>3nja_A Probable ggdef family protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; 2.37A {Chromobacterium violaceum}
Probab=99.60 E-value=3e-15 Score=134.51 Aligned_cols=121 Identities=6% Similarity=0.099 Sum_probs=93.9
Q ss_pred CCCHHHHHHHHHHhCcceEEEcCCCcEEEecHHHHHHcCCChhhHcC--CCccccccccccchHHHHHHHHHHhCCeEEE
Q 003963 126 NFTDRQYLNILQSMGQSVHIFDLSDRIIYWNRSAELLYGYSAEEALG--QDAIELLTDGRDFDVAYDIVHRIKMGERWTG 203 (783)
Q Consensus 126 ~~~~~~~~~ile~~~d~I~i~D~~G~Ii~~N~aae~L~Gys~eEllG--~~~~~l~~~~~~~~~~~~l~~~l~~g~~~~~ 203 (783)
...++.|+.+++.++++|+++|.+|.++++|+++++++||+.++++| ..+..++++++.......+..++..+..+..
T Consensus 3 ~~~~~~l~~~~~~~~~~i~~~d~~~~~~~~n~~~~~~~G~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~ 82 (125)
T 3nja_A 3 AMAEKLLHTAESDAGIGSWVLHMESGRLEWSQAVHDIFGTDSATFDATEDAYFQRVHPDDRARVRRELDRHVLGDRPFDV 82 (125)
T ss_dssp --------------CCEEEEEETTTTEEEECHHHHHHHTCCTTTCCCBHHHHHHHBCTTTHHHHHHHHHHHHHSCCCEEE
T ss_pred HHHHHHHHHHHHhCCeeEEEEEcCCCcEEECHHHHHHhCCCcccccccHHHHHhhcChhHHHHHHHHHHHHHhcCCCceE
Confidence 34567899999999999999999999999999999999999999999 5566677777665555566777888888888
Q ss_pred EEEEEcCCCCEEEEEEEEEEEECCCCCEEEEEEEEEehHHHHH
Q 003963 204 QFPAKTKTEERVLVVATNTPFYDDDGTLVGIVCVSTDSRPFQE 246 (783)
Q Consensus 204 e~~~~~kdG~~~~v~~~~~Pi~d~~G~v~g~v~i~rDITerk~ 246 (783)
++++.+++|..+|+.+...|+.+.+|++.+++++++|||++|+
T Consensus 83 e~~~~~~~g~~~~~~~~~~~~~~~~g~~~~~~g~~~DITe~k~ 125 (125)
T 3nja_A 83 EYRIVRPDGQVRELLERNHIQRQASGQVDHLWGTVIDMTEHKQ 125 (125)
T ss_dssp EEEEECTTSCEEEEEEEEEEEECTTSCEEEEEEEEEECCC---
T ss_pred EEEEECCCCCEEEEEEeeEEEECCCCCEEEEEEEEEecccccC
Confidence 9999999999999999999999999999999999999999874
No 276
>3mxq_A Sensor protein; PSI2, MCSG, structural genomics, protein structure initiativ midwest center for structural genomics; 2.78A {Vibrio cholerae o1 biovar el tor}
Probab=99.59 E-value=2.3e-15 Score=144.80 Aligned_cols=118 Identities=14% Similarity=0.134 Sum_probs=94.0
Q ss_pred HHHHHHHHHhCcceEEEcCCCcEEEecHHHHHHcCCChhhHcCCCccccccccccchHHHHHHHHHHhCCeEEEEE----
Q 003963 130 RQYLNILQSMGQSVHIFDLSDRIIYWNRSAELLYGYSAEEALGQDAIELLTDGRDFDVAYDIVHRIKMGERWTGQF---- 205 (783)
Q Consensus 130 ~~~~~ile~~~d~I~i~D~~G~Ii~~N~aae~L~Gys~eEllG~~~~~l~~~~~~~~~~~~l~~~l~~g~~~~~e~---- 205 (783)
..++.||+++++||+++|.+|+|++||+++++++|++.++++|+++.++++. ........+..++..|.+.....
T Consensus 22 ~~l~~il~~~~~gi~v~D~~g~I~~~N~a~~~~~G~~~~eviG~~~~~~~p~-~~~~~~~~l~~vl~~G~~~~~~~~~~~ 100 (152)
T 3mxq_A 22 LLLSELLDQLSFALCIVRNDYVIVKVNEYFESRVIFDGETMQGKNILELFPE-SADYLKRKIDTALVIESSSFSSWEQKP 100 (152)
T ss_dssp HHHHHHHHHHCCEEEEEETTSBEEEECHHHHHTSSSCHHHHTTSBHHHHSGG-GHHHHHHHHHHHHHHTSCEEEECCSSS
T ss_pred HHHHHHHhcCCCCEEEEcCCCEEEEECHHHHHHHCcCHHHHCCCCHHHhcCC-hHHHHHHHHHHHHhcCCceeeeccccc
Confidence 4578999999999999999999999999999999999999999999999987 43444456788888887643211
Q ss_pred -----EE---EcCCCCEEEEEEEEEEEECCCCCEEEEEEEEEehHHHHHHH
Q 003963 206 -----PA---KTKTEERVLVVATNTPFYDDDGTLVGIVCVSTDSRPFQETR 248 (783)
Q Consensus 206 -----~~---~~kdG~~~~v~~~~~Pi~d~~G~v~g~v~i~rDITerk~~E 248 (783)
.. ..++|..+|..+++.|++|.+|++.|++.+++|||+++.+.
T Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~ti~Pl~d~~G~v~gv~~ii~DVTe~~~a~ 151 (152)
T 3mxq_A 101 HLLPFKSSRPVSGEEEQMYQNLEVIPIHSEDGTIEHVCLCVYDVTIQASQQ 151 (152)
T ss_dssp CSSCC----------CCEEEEEEEEEEECTTSCEEEEEEEEEEEECC----
T ss_pred ccccccccCCCCCCCcEEEEEEEEEEEECCCCCEEEEEEEEEECCHHHhcc
Confidence 11 23567788899999999999999999999999999988653
No 277
>3luq_A Sensor protein; PAS, histidine, kinase, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: PGE; 2.49A {Geobacter sulfurreducens}
Probab=99.58 E-value=1.3e-14 Score=128.34 Aligned_cols=112 Identities=16% Similarity=0.178 Sum_probs=92.1
Q ss_pred HHHHHHHHHHhCcceEEEcCCCcEEEecHHHHHHcCCChhhHcCCCccccccccccchHHHHHHHHHHhCCeEEE-EEEE
Q 003963 129 DRQYLNILQSMGQSVHIFDLSDRIIYWNRSAELLYGYSAEEALGQDAIELLTDGRDFDVAYDIVHRIKMGERWTG-QFPA 207 (783)
Q Consensus 129 ~~~~~~ile~~~d~I~i~D~~G~Ii~~N~aae~L~Gys~eEllG~~~~~l~~~~~~~~~~~~l~~~l~~g~~~~~-e~~~ 207 (783)
++.++.++++++++|+++|.+|+|+++|+++++++|++.++++|+++.++++ +.... .......+..++.... +...
T Consensus 2 e~~~~~~~~~~~~~i~~~d~~g~i~~~N~~~~~~~g~~~~~~~g~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~ 79 (114)
T 3luq_A 2 DERLRLFTEHAPAALAMFDREMRYLAVSRRWREDYGLGDGDILGMSHYDIFP-EIGEE-WKSVHRRGLAGEVIRVEEDCF 79 (114)
T ss_dssp CHHHHHHHHTCSSEEEEEETTCBEEEECHHHHHHTTCCSSCCTTCBHHHHCT-TCCHH-HHHHHHHHHTTCCEEEEEEEE
T ss_pred hHHHHHHHhcCCceEEEEcCCcEEEEECHHHHHHHCCCHHHHcCCcHHHHCC-ccHHH-HHHHHHHHhcCCcceeeeeEE
Confidence 3679999999999999999999999999999999999999999999999884 33322 3333344444555444 3477
Q ss_pred EcCCCCEEEEEEEEEEEECCCCCEEEEEEEEEehH
Q 003963 208 KTKTEERVLVVATNTPFYDDDGTLVGIVCVSTDSR 242 (783)
Q Consensus 208 ~~kdG~~~~v~~~~~Pi~d~~G~v~g~v~i~rDIT 242 (783)
.+++|..+|+.++..|+++.+|++.|++++++|||
T Consensus 80 ~~~~g~~~~~~~~~~p~~~~~g~~~~~~~~~~DIT 114 (114)
T 3luq_A 80 VRADGRTQWLRWEVRPWYEGEGRVGGVVIFTEDIT 114 (114)
T ss_dssp EC--CCEEEEEEEEEEEECTTSCEEEEEEEEEECC
T ss_pred EcCCCcEEEEEEEEEEeECCCCCEEEEEEEEeeCC
Confidence 88999999999999999999999999999999997
No 278
>3kx0_X Uncharacterized protein RV1364C/MT1410; PAS domain, sensory domain, mycobacteium tuberculos molecule binding domain; 2.30A {Mycobacterium tuberculosis}
Probab=99.57 E-value=9.7e-15 Score=144.01 Aligned_cols=124 Identities=15% Similarity=0.094 Sum_probs=102.1
Q ss_pred CHHHHHHHHHHhCcceEEEc-CCCcEEEecHHHHHHcCCChhhHcCCCccccccccccchHHHHHHHHHHhCCeEEEEEE
Q 003963 128 TDRQYLNILQSMGQSVHIFD-LSDRIIYWNRSAELLYGYSAEEALGQDAIELLTDGRDFDVAYDIVHRIKMGERWTGQFP 206 (783)
Q Consensus 128 ~~~~~~~ile~~~d~I~i~D-~~G~Ii~~N~aae~L~Gys~eEllG~~~~~l~~~~~~~~~~~~l~~~l~~g~~~~~e~~ 206 (783)
.++.|+.++++++++|+++| .+|+|+++|+++++++||+ +++|+++.+++++.........+..++..|+....+..
T Consensus 35 ~~~~l~~l~~~~~~~i~~~d~~~g~i~~~N~a~~~l~G~~--~~~G~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 112 (185)
T 3kx0_X 35 AAEDVRRIFEHIPAILVGLEGPDHRFVAVNAAYRGFSPLL--DTVGQPAREVYPELEGQQIYEMLDRVYQTGEPQSGSEW 112 (185)
T ss_dssp CHHHHHHHHHHCSSEEEEEETTTTEEEEECHHHHHHCCCC--SCTTSBHHHHCTTSCSSSSHHHHHHHHHHCCCEEEEEE
T ss_pred hHHHHHHHHhcCCceEEEEECCCcEEEEEcHHHHHHcCCc--cccCCcHHHHCCchhhhhHHHHHHHHHHcCCcccccce
Confidence 45789999999999999999 9999999999999999999 99999999999877655555667788888888655432
Q ss_pred EE---cCC--CCEEEEEEEEEEEECCCCCEEEEEEEEEehHHHHHHHHHHHH
Q 003963 207 AK---TKT--EERVLVVATNTPFYDDDGTLVGIVCVSTDSRPFQETRAALWD 253 (783)
Q Consensus 207 ~~---~kd--G~~~~v~~~~~Pi~d~~G~v~g~v~i~rDITerk~~E~~L~~ 253 (783)
.. +++ |..+|+.+++.|+++.+|.+.|++++++|||++|++|+++..
T Consensus 113 ~~~~~~~~~gg~~~~~~~~~~pi~~~~g~~~g~~~~~~DITerk~~e~~~~~ 164 (185)
T 3kx0_X 113 RLQTDYDGSGVEERYFDFVVTPRRRADGSIEGVQLIVDDVTSRVRARQAAEA 164 (185)
T ss_dssp EEC--------CCEEEEEEEEEEECTTSCEEEEEEEEEECHHHHTTCC----
T ss_pred eEEeeccCCCCccEEEEEEEEEEECCCCCEEEEEEEEEeCCHHHHHHHHHHH
Confidence 22 222 778999999999999999999999999999999999888433
No 279
>2wkq_A NPH1-1, RAS-related C3 botulinum toxin substrate 1; transferase, cell adhesion, nucleotide-binding, protein engineering, RAS superfamily LOV2; HET: GTP FMN; 1.60A {Avena sativa} PDB: 2wkr_A* 2wkp_A*
Probab=99.56 E-value=1.2e-14 Score=157.06 Aligned_cols=117 Identities=24% Similarity=0.209 Sum_probs=108.2
Q ss_pred HHHHhCcceEEEcC---CCcEEEecHHHHHHcCCChhhHcCCCccccccccccchHHHHHHHHHHhCCeEEEEEEEEcCC
Q 003963 135 ILQSMGQSVHIFDL---SDRIIYWNRSAELLYGYSAEEALGQDAIELLTDGRDFDVAYDIVHRIKMGERWTGQFPAKTKT 211 (783)
Q Consensus 135 ile~~~d~I~i~D~---~G~Ii~~N~aae~L~Gys~eEllG~~~~~l~~~~~~~~~~~~l~~~l~~g~~~~~e~~~~~kd 211 (783)
+++.++++|+++|. +|+|+|||++|++++||+++|++|+++.+++++.........+...+..+..+..+.+.+++|
T Consensus 16 ~~~~~~~~i~~~D~~~~~g~i~~~N~a~~~l~G~~~~el~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~d 95 (332)
T 2wkq_A 16 TLERIEKNFVITDPRLPDNPIIFASDSFLQLTEYSREEILGRNARFLQGPETDRATVRKIRDAIDNQTEVTVQLINYTKS 95 (332)
T ss_dssp CGGGCCSEEEEECTTSTTCCEEEECHHHHHHHCCCHHHHTTSCGGGGCCTTCCHHHHHHHHHHHHTTCCEEEEEEEECTT
T ss_pred HhhcCCCcEEEecCCCCCCCEEEeehHHHHHhCCCHHHHcCCCchhhcCCCCCHHHHHHHHHHHHcCCeeEEEEEEEcCC
Confidence 47899999999999 999999999999999999999999999999887766666667888899999999999999999
Q ss_pred CCEEEEEEEEEEEECCCCCEEEEEEEEEehHHHHHHHHHH
Q 003963 212 EERVLVVATNTPFYDDDGTLVGIVCVSTDSRPFQETRAAL 251 (783)
Q Consensus 212 G~~~~v~~~~~Pi~d~~G~v~g~v~i~rDITerk~~E~~L 251 (783)
|..+|+.+++.|++|.+|++.|++++++|||+++++++++
T Consensus 96 G~~~~~~~~~~pi~d~~g~~~~~v~~~~DITe~k~~e~~~ 135 (332)
T 2wkq_A 96 GKKFWNLFHLQPMRDQKGDVQYFIGVQLDGTEHVRDAAER 135 (332)
T ss_dssp CCEEEEEEEEEEEECTTSCEEEEEEEEEEESSCCCHHHHH
T ss_pred CCEEEEeeEEEEeEcCCCCEEEEEEEeccCchhhhhhhhc
Confidence 9999999999999999999999999999999998887765
No 280
>1d06_A Nitrogen fixation regulatory protein FIXL; oxygen sensor, histidine kinase, PAS, high-resolution, two-C system, signaling protein; HET: HEM; 1.40A {Sinorhizobium meliloti} SCOP: d.110.3.2 PDB: 1ew0_A*
Probab=99.55 E-value=2.9e-14 Score=131.45 Aligned_cols=111 Identities=14% Similarity=0.158 Sum_probs=89.2
Q ss_pred HHHHHHHHHhCcceEEEcCCCcEEEecHHHHHHcCCChhhHcCCCccccccccccchHHHHHHHHHHhCCe----EEEEE
Q 003963 130 RQYLNILQSMGQSVHIFDLSDRIIYWNRSAELLYGYSAEEALGQDAIELLTDGRDFDVAYDIVHRIKMGER----WTGQF 205 (783)
Q Consensus 130 ~~~~~ile~~~d~I~i~D~~G~Ii~~N~aae~L~Gys~eEllG~~~~~l~~~~~~~~~~~~l~~~l~~g~~----~~~e~ 205 (783)
+.|+.++++++++|+++|.+|+|++||++|++|+||+.+|++|+++..++++.........+......+.. ...++
T Consensus 16 ~~~~~l~~~~~d~i~~~d~~g~i~~~N~a~~~l~Gy~~~eliG~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~ 95 (130)
T 1d06_A 16 AHLRSILDTVPDATVVSATDGTIVSFNAAAVRQFGYAEEEVIGQNLRILMPEPYRHEHDGYLQRYMATGEKRIIGIDRVV 95 (130)
T ss_dssp SCHHHHHTTCSSEEEEEETTSBEEEECHHHHHHHCCCHHHHTTSBGGGGSCTTHHHHHHHHHHHHHHHCCCSSTTSCEEE
T ss_pred HHHHHHHhhCcCeEEEECCCCeEEEEcHHHHHHHCCCHHHHcCCcHHHHCCchhHHHHHHHHHHHHhcCCccccCCeeEE
Confidence 34889999999999999999999999999999999999999999999988765543323334444444443 23466
Q ss_pred EEEcCCCCEEEEEEEEEEEECCCCCEEEEEEEEEehH
Q 003963 206 PAKTKTEERVLVVATNTPFYDDDGTLVGIVCVSTDSR 242 (783)
Q Consensus 206 ~~~~kdG~~~~v~~~~~Pi~d~~G~v~g~v~i~rDIT 242 (783)
..+++||+.+|+.+++.|+.+.+ ..+++++++|||
T Consensus 96 ~~~~kdG~~~~~~~~~~~~~~~~--~~~~~~~~~DIT 130 (130)
T 1d06_A 96 SGQRKDGSTFPMKLAVGEMRSGG--ERFFTGFIRDLT 130 (130)
T ss_dssp EEECTTSCEEEEEEEEEEEEETT--EEEEEEEEEECC
T ss_pred EEEeCCCCEEEEEEEEEEEEECC--eEEEEEEEEECc
Confidence 77899999999999999997633 356889999997
No 281
>3vol_A Aerotaxis transducer AER2; heme, oxygen sensor protein, PAS, HAMP, cyanoMet, CN-bound, protein; HET: HEM; 2.40A {Pseudomonas aeruginosa}
Probab=99.54 E-value=2.3e-14 Score=147.75 Aligned_cols=129 Identities=13% Similarity=0.142 Sum_probs=99.0
Q ss_pred CCCcCCCCHHHHHHHHHHhCcceEEEcCCCcEEEecHHHHHHc------------CCChhhHcCCCccccccccccchHH
Q 003963 121 GPSAFNFTDRQYLNILQSMGQSVHIFDLSDRIIYWNRSAELLY------------GYSAEEALGQDAIELLTDGRDFDVA 188 (783)
Q Consensus 121 ~~~a~~~~~~~~~~ile~~~d~I~i~D~~G~Ii~~N~aae~L~------------Gys~eEllG~~~~~l~~~~~~~~~~ 188 (783)
|-.+.....+.++.+|++++++|+++|.+|+|+|+|++|++|+ ||+.++++|+++..+++... ..
T Consensus 13 ~~~~~~~e~~~l~~iLd~~~~~vii~D~~g~I~~~N~a~~~ll~~~~~~~~~~l~G~~~~eliG~~~~~~~~~~~---~~ 89 (233)
T 3vol_A 13 GLVPRGSHMARIKSALDNVSANVMIADNDLNIIYMNRTVSEMLGRAEADIRKQLPNFDAGRLMGANIDVFHKNPA---HQ 89 (233)
T ss_dssp -----CTHHHHHHHHHTTSSSEEEEEETTSBEEEECHHHHHHHHHTHHHHHTTCTTCCTTSCTTCBGGGGSSSHH---HH
T ss_pred cCCchHHHHHHHHHHHhcCCCcEEEECCCCcEEEecHHHHHHHHHHHHHHHhhcCCCCHHHHcCCCHHHHcCCHH---HH
Confidence 3444555568899999999999999999999999999999998 89999999999998875321 12
Q ss_pred HHHHHHHHhCCeEEEEEEEEcCCCCEEEEEEEEEEEECCCCCEEEEEEEEEehHHHHHHHHHHHHhhcccc
Q 003963 189 YDIVHRIKMGERWTGQFPAKTKTEERVLVVATNTPFYDDDGTLVGIVCVSTDSRPFQETRAALWDTKNSDT 259 (783)
Q Consensus 189 ~~l~~~l~~g~~~~~e~~~~~kdG~~~~v~~~~~Pi~d~~G~v~g~v~i~rDITerk~~E~~L~~~~~~~~ 259 (783)
..++..+. ..+..++. .+| .|+.++++||+|.+|++.|++++++|||+++++|++++...+.+.
T Consensus 90 ~~~~~~~~--~~~~~~~~---~~g--~~~~~~~~Pi~d~~G~~~g~v~~~~DITe~~~~e~ei~~l~~a~~ 153 (233)
T 3vol_A 90 RHLLANLT--GVHKAELN---LGG--RRFSLDVVPVFNDANERLGSAVQWTDRTEEHRAEQEVSQLVQAAA 153 (233)
T ss_dssp HHHHHTCC--SCEEEEEE---ETT--EEEEEEEEEEECTTCCEEEEEEEEEECHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhcc--cceeEEEE---ECC--EEEEEEEEEEECCCCCEEEEEEEEehhhHHHHHHHHHHHHHHHHh
Confidence 22333222 23444432 355 367899999999999999999999999999999999988776544
No 282
>2v0u_A NPH1-1, LOV2; kinase, transferase, ATP-binding, serine/threonine-protein kinase, light-induced signal trans phototropin1, nucleotide-binding; HET: FMN; 1.40A {Avena sativa} PDB: 2v0w_A* 2v1b_A* 2v1a_A* 1jnu_A* 1g28_A*
Probab=99.52 E-value=4.2e-14 Score=129.39 Aligned_cols=116 Identities=22% Similarity=0.205 Sum_probs=105.5
Q ss_pred HHHHHHHhCcceEEEcC---CCcEEEecHHHHHHcCCChhhHcCCCccccccccccchHHHHHHHHHHhCCeEEEEEEEE
Q 003963 132 YLNILQSMGQSVHIFDL---SDRIIYWNRSAELLYGYSAEEALGQDAIELLTDGRDFDVAYDIVHRIKMGERWTGQFPAK 208 (783)
Q Consensus 132 ~~~ile~~~d~I~i~D~---~G~Ii~~N~aae~L~Gys~eEllG~~~~~l~~~~~~~~~~~~l~~~l~~g~~~~~e~~~~ 208 (783)
++.++++++++|+++|. +|+|+++|+++++++||+.++++|+++..++++.........+...+..+..+..++...
T Consensus 4 l~~~~~~~~~~i~~~d~~~~~~~i~~~N~~~~~~~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (146)
T 2v0u_A 4 LATTLERIEKNFVITDPRLPDNPIIFASDSFLQLTEYSREEILGRNCRFLQGPETDRATVRKIRDAIDNQTEVTVQLINY 83 (146)
T ss_dssp CCCTGGGSSSCEEEECTTSTTCCEEEECHHHHHHHCCCHHHHTTSCGGGGCCTTSCHHHHHHHHHHHHTTCCEEEEEEEE
T ss_pred HHHHHhcCCCcEEEEcCCCCCceEEEEcHHHHHHHCcCHHHHcCCCHHHhcCCcCChHHHHHHHHHHhcCCCcceEEEEE
Confidence 45678999999999999 999999999999999999999999999998877766555667788888898888899999
Q ss_pred cCCCCEEEEEEEEEEEECCCCCEEEEEEEEEehHHHHHH
Q 003963 209 TKTEERVLVVATNTPFYDDDGTLVGIVCVSTDSRPFQET 247 (783)
Q Consensus 209 ~kdG~~~~v~~~~~Pi~d~~G~v~g~v~i~rDITerk~~ 247 (783)
+++|..+|+.++..|+.+.+|.+.+++++++|||++++.
T Consensus 84 ~~~g~~~~~~~~~~~~~~~~g~~~~~~~~~~Dit~~~~~ 122 (146)
T 2v0u_A 84 TKSGKKFWNLFHLQPMRDQKGDVQYFIGVQLDGTEHVRD 122 (146)
T ss_dssp CTTCCEEEEEEEEEEEECTTSCEEEEEEEEEEESSCCCH
T ss_pred ecCCcEEEEEEEEEEeECCCCCEEEEEEEEeechHHHHH
Confidence 999999999999999999999999999999999999873
No 283
>3ewk_A Sensor protein; PAS domain, alpha/beta fold, kinase, phosphoprotein, transfe flavoprotein; HET: FAD; 2.34A {Methylococcus capsulatus}
Probab=99.51 E-value=1e-13 Score=141.35 Aligned_cols=111 Identities=23% Similarity=0.336 Sum_probs=103.1
Q ss_pred HHHHHHHHHhCcceEEEcCCCcEEEecHHHHHHcCCChhhHcCCCccccccccccchHHHHHHHHHHhCCeEEEEEEEEc
Q 003963 130 RQYLNILQSMGQSVHIFDLSDRIIYWNRSAELLYGYSAEEALGQDAIELLTDGRDFDVAYDIVHRIKMGERWTGQFPAKT 209 (783)
Q Consensus 130 ~~~~~ile~~~d~I~i~D~~G~Ii~~N~aae~L~Gys~eEllG~~~~~l~~~~~~~~~~~~l~~~l~~g~~~~~e~~~~~ 209 (783)
+.++.++++++++|+++|.+|+|+++|++|++++||+.+|++|+++..+.++.........+++.+..++.+..++..++
T Consensus 111 ~~~~~~~~~~~~~i~~~d~~g~i~~~N~~~~~~~G~~~~e~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~ 190 (227)
T 3ewk_A 111 ARLKQAMDANSEMILLTDRAGRIIYANPALCRFSGMAEGELLGQSPSILDSPLADQETLAAMQEALQAGQPWSGRLLNRR 190 (227)
T ss_dssp HHHHHHHHTCCSEEEEECTTSCEEEECHHHHHHHTCCTHHHHSSCGGGGBCTTSCHHHHHHHHHHHHHTCCEECCEEEEE
T ss_pred HHHHHHHhcCcCeEEEEcCCCcEEEEchHHHHHhCCCHHHHcCCChhhccCCCCCHHHHHHHHHHHHcCCceeEEEEEEC
Confidence 45778899999999999999999999999999999999999999999998877766677788899999999999999999
Q ss_pred CCCC------EEEEEEEEEEEECCCCCEEEEEEEEEe
Q 003963 210 KTEE------RVLVVATNTPFYDDDGTLVGIVCVSTD 240 (783)
Q Consensus 210 kdG~------~~~v~~~~~Pi~d~~G~v~g~v~i~rD 240 (783)
+||. .+|+.+++.|++|.+|++.+++++++|
T Consensus 191 k~G~~~~dg~~~~~~~~~~pi~d~~g~~~~~v~i~~D 227 (227)
T 3ewk_A 191 RTGPAPHDAEDYWAEISTTPIHTDGNGLVGYVQIQHD 227 (227)
T ss_dssp ECCSSSSCEEEEEEEEEEEEEECSSSCEEEEEEEEEC
T ss_pred CCCCcCcccceEEEEEEEEEEECCCCCEEEEEEEecC
Confidence 9997 899999999999999999999999988
No 284
>3h9w_A Diguanylate cyclase with PAS/PAC sensor; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.90A {Marinobacter aquaeolei}
Probab=99.49 E-value=6e-14 Score=126.06 Aligned_cols=111 Identities=12% Similarity=0.048 Sum_probs=95.0
Q ss_pred hCcceEEEc-CCCcEEEecHHHHHHcCCChhhHcCCC-ccccccccccchHHHHHHHHHHhCCeEEEEEEEEcCCCCEEE
Q 003963 139 MGQSVHIFD-LSDRIIYWNRSAELLYGYSAEEALGQD-AIELLTDGRDFDVAYDIVHRIKMGERWTGQFPAKTKTEERVL 216 (783)
Q Consensus 139 ~~d~I~i~D-~~G~Ii~~N~aae~L~Gys~eEllG~~-~~~l~~~~~~~~~~~~l~~~l~~g~~~~~e~~~~~kdG~~~~ 216 (783)
++++|+.+| .+|+|+|+|+++++|+||+.++++|.. +..+++|++.......+..++..+..+..+++++++||..+|
T Consensus 2 a~~giw~~d~~~~~~~~~n~~~~~l~G~~~~e~~~~~~~~~~ihpdd~~~~~~~~~~~~~~~~~~~~e~r~~~~dG~~~w 81 (115)
T 3h9w_A 2 TKAIPWKINWQTMAFEYIGPQIEALLGWPQGSWKSVEDWATRMHPEDQEWVVNFCVKQSECGVDHEADYRALHRDGHYVW 81 (115)
T ss_dssp -CCEEEEEETTTTEEEEECTHHHHHHCSCGGGCCBHHHHHHSBCHHHHHHHHHHHHHHHHTTCCEEEEEEEECTTSCEEE
T ss_pred cceEEEEEEcCCCcEEEEChhHHHHhCCChHHccCHHHHHHhcCHHHHHHHHHHHHHHHhcCCcccEEEEEEcCCCCEEE
Confidence 467899999 679999999999999999999999932 345777777666666677888888888999999999999999
Q ss_pred EEEEEEEEECCCCCEEEEEEEEEehHHHHHHHH
Q 003963 217 VVATNTPFYDDDGTLVGIVCVSTDSRPFQETRA 249 (783)
Q Consensus 217 v~~~~~Pi~d~~G~v~g~v~i~rDITerk~~E~ 249 (783)
+.....|++|.+|++++++++..|||++|++|+
T Consensus 82 ~~~~~~~~~d~~G~~~~~~G~~~Dit~~k~~~~ 114 (115)
T 3h9w_A 82 IRDVVHVVRDDSGEVEALIGFMFDISLEHHHHH 114 (115)
T ss_dssp EEEEEEEEECTTSCEEEEEEEEEECGGGGC---
T ss_pred EEEEEEEEECCCCCEEEEEEEEeccCccccccc
Confidence 999999999999999999999999999998875
No 285
>3mjq_A Uncharacterized protein; NESG, structural genomics, PSI-2, protein structure initiati northeast structural genomics consortium; 2.60A {Desulfitobacterium hafniense}
Probab=99.49 E-value=5.6e-14 Score=126.76 Aligned_cols=121 Identities=12% Similarity=0.114 Sum_probs=88.0
Q ss_pred HHHHHHhCcceEEEcCCCcEEEecHHHHHHcCCChhhHcCCCccccccccccchHHHHHHHHHHhCCeEEEEEEEEcCCC
Q 003963 133 LNILQSMGQSVHIFDLSDRIIYWNRSAELLYGYSAEEALGQDAIELLTDGRDFDVAYDIVHRIKMGERWTGQFPAKTKTE 212 (783)
Q Consensus 133 ~~ile~~~d~I~i~D~~G~Ii~~N~aae~L~Gys~eEllG~~~~~l~~~~~~~~~~~~l~~~l~~g~~~~~e~~~~~kdG 212 (783)
+.++++++++|+++|.+|+|+++|+++++++||+.++++|+++.+++++.........+...+..+.. ..++...+++|
T Consensus 2 ~~l~~~~~~~i~~~d~~g~i~~~N~~~~~~~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~g 80 (126)
T 3mjq_A 2 KNFLETIEDMILIINREGRLLYANTAVPKKLGYTHEELMSMHILTITSAGKMAEGEKILAELFAGKKE-SLPLSLEKKEG 80 (126)
T ss_dssp CTTGGGCSSEEEEEETTSBEEEECTHHHHHHSCCHHHHHHSBHHHHHCTTCHHHHHHHHHHHHHTCCS-EEEEEEECTTS
T ss_pred hhHHhhCCceEEEEeCCCcEEEEcHHHHHHHCCCHHHHcCCCHHHHcCchhHHHHHHHHHHHHhCCCc-eeEEEEEccCC
Confidence 45789999999999999999999999999999999999999999988766544333344444444444 66788889999
Q ss_pred CEEEEEEEEEEEECCCCCEEEEEEEEEehHHHHHHHHHHHHhhc
Q 003963 213 ERVLVVATNTPFYDDDGTLVGIVCVSTDSRPFQETRAALWDTKN 256 (783)
Q Consensus 213 ~~~~v~~~~~Pi~d~~G~v~g~v~i~rDITerk~~E~~L~~~~~ 256 (783)
..+|+.++..|+.+ + ...+++++++|||+++++++++.....
T Consensus 81 ~~~~~~~~~~~~~~-~-~~~~~~~~~~DITe~k~a~~~~~~~~~ 122 (126)
T 3mjq_A 81 TSIPAKARIWQGKW-H-NEPCLFAIIKDLSKEERASSPPFLEHH 122 (126)
T ss_dssp CEEEEEEEEEEEES-S-SSEEEEEEEEECC--------------
T ss_pred CEEEEEEEEEeeeE-C-CceEEEEEEEechHHHHhhcccchhhc
Confidence 99999999988764 3 356889999999999999988765543
No 286
>3olo_A Two-component sensor histidine kinase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, TRA; 2.09A {Nostoc SP}
Probab=99.48 E-value=3.8e-13 Score=119.91 Aligned_cols=107 Identities=13% Similarity=0.075 Sum_probs=89.4
Q ss_pred HHHHHHHHHHhCcceEEEcCCCcEEEecHHHHHHcCCChhhHcCCCccccccccccchHHHHHHHHHHhCCeEEEEEEEE
Q 003963 129 DRQYLNILQSMGQSVHIFDLSDRIIYWNRSAELLYGYSAEEALGQDAIELLTDGRDFDVAYDIVHRIKMGERWTGQFPAK 208 (783)
Q Consensus 129 ~~~~~~ile~~~d~I~i~D~~G~Ii~~N~aae~L~Gys~eEllG~~~~~l~~~~~~~~~~~~l~~~l~~g~~~~~e~~~~ 208 (783)
.+.++.++++++++|+++|.+|+|+++|+++++++||++++++|+++.++++...... +..+..+..+..+....
T Consensus 12 ~~~~~~~~~~~~~~i~~~d~~g~i~~~N~~~~~l~G~~~~el~g~~~~~~~~~~~~~~-----~~~~~~~~~~~~e~~~~ 86 (118)
T 3olo_A 12 FKFAHYLINNAVEASFCLGDNWQFLYVNDATCRMTEYSREQLLSMNLQDIDVDFALHD-----WEEIRQKNNYTFKTRYR 86 (118)
T ss_dssp HHHHHHHHHHCSSEEEEECTTSBEEEECHHHHHHHCCCHHHHTTCBGGGTBTTGGGSC-----HHHHHHHSEEEEEEEEE
T ss_pred HHHHHHHHhcCCceEEEECCCCcEEEEHHHHHHHHCCCHHHHhCCChhhcccccCHHH-----HHHHHhcCcEEEEEEEE
Confidence 3567899999999999999999999999999999999999999999999886543322 34455566778888899
Q ss_pred cCCCCEEEEEEEEEEEECCCCCEEEEEEEEEehH
Q 003963 209 TKTEERVLVVATNTPFYDDDGTLVGIVCVSTDSR 242 (783)
Q Consensus 209 ~kdG~~~~v~~~~~Pi~d~~G~v~g~v~i~rDIT 242 (783)
+++|..+|+.++..|+.+.+ . .+++++++|||
T Consensus 87 ~~~g~~~~~~~~~~~~~~~~-~-~~~~~~~~DIT 118 (118)
T 3olo_A 87 SQSGRIFLVEMSLTFLEDQE-R-RFSCVFVREKS 118 (118)
T ss_dssp CTTCCEEEEEEEEEEEEETT-E-EEEEEEEEEC-
T ss_pred ccCCCEEEEEEEEEEEEECC-c-cEEEEEEEeCC
Confidence 99999999999999997643 3 46789999997
No 287
>3icy_A Sensor protein; sensory box histidine kinase/response regulator domain, kinase, chlorobium tepidum TLS, PSI-2; 2.68A {Chlorobaculum tepidum}
Probab=99.48 E-value=6.5e-14 Score=125.00 Aligned_cols=115 Identities=11% Similarity=0.119 Sum_probs=103.2
Q ss_pred CHHHHHHHHHHhCcceEEEcCCCcEEEecHHHHHHcCCChhhHcCCCc--cccccccccchHHHHHHHHHHhCCeEEEEE
Q 003963 128 TDRQYLNILQSMGQSVHIFDLSDRIIYWNRSAELLYGYSAEEALGQDA--IELLTDGRDFDVAYDIVHRIKMGERWTGQF 205 (783)
Q Consensus 128 ~~~~~~~ile~~~d~I~i~D~~G~Ii~~N~aae~L~Gys~eEllG~~~--~~l~~~~~~~~~~~~l~~~l~~g~~~~~e~ 205 (783)
+++.|+.++++++++|+.+|.+|.++++|+++++++||+.++++|+.. ..++++++.......+...+..+..+..++
T Consensus 2 s~~~~~~l~~~~~~~i~~~d~~~~~~~~n~~~~~~~G~~~~~~~~~~~~~~~~i~p~d~~~~~~~~~~~~~~~~~~~~e~ 81 (118)
T 3icy_A 2 NAEELQALVDNIPAAIYHLDVSGQATIRFRPPAFLKTLVSEHAGTTRLNTLSMIHHDDRHMLSNAYSKLREAKHSLTLVY 81 (118)
T ss_dssp HHHHHHHHHTTCCCCCEEECTTSCEEECCCCCGGGGGGEEEETTEEEEGGGGGBCGGGHHHHHHHHHHHHHSCCEEEEEE
T ss_pred cHHHHHHHHhcCCceEEEEEcCCCceEEechhHhhcCCCHHHccCChhHHHHHcCHHHHHHHHHHHHHHHhcCCCceEEE
Confidence 357899999999999999999999999999999999999999988754 567777776555566777788888888999
Q ss_pred EEEcCCCCEEEEEEEEEEEECCCCCEEEEEEEEEehH
Q 003963 206 PAKTKTEERVLVVATNTPFYDDDGTLVGIVCVSTDSR 242 (783)
Q Consensus 206 ~~~~kdG~~~~v~~~~~Pi~d~~G~v~g~v~i~rDIT 242 (783)
++.+++|..+|+.....|+++.+|.+.+++++++|||
T Consensus 82 r~~~~~g~~~w~~~~~~~~~~~~g~~~~~~g~~~DIT 118 (118)
T 3icy_A 82 RIVTPEGKLHWIEDHMRSSFSDDGLFSGIDGILCEVT 118 (118)
T ss_dssp EEECTTCCEEEEEEEEEEEECTTSCEEEEEEEEEECC
T ss_pred EEECCCCCEEEEEEEEEEEECCCCCEEEEEEEEEecC
Confidence 9999999999999999999999999999999999997
No 288
>2qkp_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein struct initiative; 1.75A {Streptococcus mutans}
Probab=99.48 E-value=5.8e-14 Score=134.84 Aligned_cols=121 Identities=18% Similarity=0.269 Sum_probs=100.2
Q ss_pred CCHHHHHHHHHHhCcceEEEcCCCcEEEecHH---HHHHcCCChhhHcCCCccccccccccchHHHHHHHHHHhCCeEEE
Q 003963 127 FTDRQYLNILQSMGQSVHIFDLSDRIIYWNRS---AELLYGYSAEEALGQDAIELLTDGRDFDVAYDIVHRIKMGERWTG 203 (783)
Q Consensus 127 ~~~~~~~~ile~~~d~I~i~D~~G~Ii~~N~a---ae~L~Gys~eEllG~~~~~l~~~~~~~~~~~~l~~~l~~g~~~~~ 203 (783)
++.++++.||++++++|+++|.+|+|+|+|++ +++++| ..++++|+++.+++++.. ....+.+..++++|+....
T Consensus 16 l~~~~l~~IL~~~~~gI~~vD~~g~I~~~N~a~~~~~~i~g-~~~~~iGr~v~~~~~~~~-~~~v~~i~~~l~~g~~~~~ 93 (151)
T 2qkp_A 16 LSVEQANLILNHLPLEITFVNKDDIFQYYNDSVPAAEMVFK-RTPSQVGRNVELCHPPKV-LDKVKKVFELLRNGQRDKV 93 (151)
T ss_dssp ECHHHHHHHHHHSSSEEEEEETTSBEEEECCCSCGGGCSSC-CCGGGTTSBGGGSSCHHH-HHHHHHHHHHHHTTSBSEE
T ss_pred ecHHHHHHHHHhCCCceEEEcCCCeEEEEeCCCchhhhhcC-CCHHHcCCCHHHhCCHHH-HHHHHHHHHHHHcCCccEE
Confidence 55688999999999999999999999999999 999999 567899999998876433 3345667888999988766
Q ss_pred EEEEEcCC-CCEEEEEEEEEEEECCCCCEEEEEEEEEehHHHHHHHHHH
Q 003963 204 QFPAKTKT-EERVLVVATNTPFYDDDGTLVGIVCVSTDSRPFQETRAAL 251 (783)
Q Consensus 204 e~~~~~kd-G~~~~v~~~~~Pi~d~~G~v~g~v~i~rDITerk~~E~~L 251 (783)
+++....+ | .++.++..||+|++|+++|++.+++|||+.++++++.
T Consensus 94 ~~~~~~~~~~--~~v~v~~~Pi~d~~G~~~G~vev~~Dit~l~~le~~r 140 (151)
T 2qkp_A 94 NMWFQSERLG--KFVYVTYAAVRDQAGDFQGVLEYVQDIKPFFELDSEF 140 (151)
T ss_dssp EEEEEETTTT--EEEEEEEEEEECTTCCEEEEEEEEEECGGGGGGGGC-
T ss_pred EEEEecCCCC--eEEEEEEEEEECCCCCEEEEEEEEEECHHHHhhhhhh
Confidence 66654332 4 4578889999999999999999999999988776653
No 289
>2kdk_A ARYL hydrocarbon receptor nuclear translocator-LI 2; circadian clock, PAS domain, transcription, activator, biolo rhythms, DNA-binding, nucleus; NMR {Homo sapiens}
Probab=99.44 E-value=1.5e-13 Score=124.02 Aligned_cols=110 Identities=18% Similarity=0.214 Sum_probs=92.5
Q ss_pred HHHHhCcceEEEcCCCcEEEecHHHHHHcCCChhhHcCCCccccccccccchHHHHHHHHHHhC-CeEEEEEEEEcCCCC
Q 003963 135 ILQSMGQSVHIFDLSDRIIYWNRSAELLYGYSAEEALGQDAIELLTDGRDFDVAYDIVHRIKMG-ERWTGQFPAKTKTEE 213 (783)
Q Consensus 135 ile~~~d~I~i~D~~G~Ii~~N~aae~L~Gys~eEllG~~~~~l~~~~~~~~~~~~l~~~l~~g-~~~~~e~~~~~kdG~ 213 (783)
++++.+++|+++|.+|+|+|+|+++++++||+.+|++|+++.+++++++.......+...+..+ .....+++++++||.
T Consensus 8 ~~~~~~~~i~~~d~~g~i~~~N~~~~~~~G~~~~el~g~~~~~~~~p~d~~~~~~~~~~~~~~~~~~~~~e~r~~~~dG~ 87 (121)
T 2kdk_A 8 INVKPTEFITRFAVNGKFVYVDQRATAILGYLPQELLGTSCYEYFHQDDHNNLTDKHKAVLQSKEKILTDSYKFRAKDGS 87 (121)
T ss_dssp CCCCSSEEEEEECTTSBEEEECTHHHHHTCCCTTTSBTSBTTTTBCSSSHHHHHHHHHHHHTSSSCEEEEEEEEECSSSC
T ss_pred cccCCccEEEEECCCeeEEEEChhHHHHHCCCHHHHcCCcHHHeeCHHHHHHHHHHHHHHHhCCCCCccEEEEEEEcCCC
Confidence 5667899999999999999999999999999999999999999988876544444455556553 446778889999999
Q ss_pred EEEEEEEEEEEECCC-CCEEEEEEEEEehHHH
Q 003963 214 RVLVVATNTPFYDDD-GTLVGIVCVSTDSRPF 244 (783)
Q Consensus 214 ~~~v~~~~~Pi~d~~-G~v~g~v~i~rDITer 244 (783)
.+|+.++..|++|.+ +.+.+++++.+||++.
T Consensus 88 ~~~~~~~~~~~~d~~~~~~~~~v~~~~~i~~~ 119 (121)
T 2kdk_A 88 FVTLKSQWFSFTNPDTKELEYIVSVNTLVLGH 119 (121)
T ss_dssp EEEEEEEEEEEECCSSSCEEEEEEEEECCSSC
T ss_pred EEEEEEEEEEEECCCCCeeeEEEEEEEecccc
Confidence 999999999999876 5677788999999864
No 290
>3eeh_A Putative light and redox sensing histidine kinase; structural genomic MCSG, protein structure initiative, midwest center for STRU genomics; HET: PG5; 1.95A {Haloarcula marismortui}
Probab=99.44 E-value=3e-13 Score=120.36 Aligned_cols=116 Identities=14% Similarity=0.161 Sum_probs=97.4
Q ss_pred CCCHHHHHHHHHHhCcceEEEcCC-CcEEEecHHHHHHcCCChhhHcCCC--ccccccccccchHHHHHHHHHHhCCeEE
Q 003963 126 NFTDRQYLNILQSMGQSVHIFDLS-DRIIYWNRSAELLYGYSAEEALGQD--AIELLTDGRDFDVAYDIVHRIKMGERWT 202 (783)
Q Consensus 126 ~~~~~~~~~ile~~~d~I~i~D~~-G~Ii~~N~aae~L~Gys~eEllG~~--~~~l~~~~~~~~~~~~l~~~l~~g~~~~ 202 (783)
...++.++.++++++++|+++|.+ |+|+++|+++++++||+.++++|+. +..+++++...... .....+..+..+.
T Consensus 7 ~~~~~~~~~~~~~~~~~i~~~d~~~~~i~~~n~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 85 (125)
T 3eeh_A 7 AKSERRVRELTEATNDILWEFTADLSEVLVINSAYEDIWGRSVAKLRENPHDFLNGIHPEDRELMK-DTMQSLMDGESAD 85 (125)
T ss_dssp ---CHHHHHHHSCCCCEEEEEETTSSCEEEECTHHHHHHSSCHHHHHHCGGGGGGGBCHHHHHHHH-HHHHHHHTTCCEE
T ss_pred HHHHHHHHHHHhcCCceEEEEEcCCCcEEEecHHHHHHHCCCHHHHccCcHHHHHhcCHHHHHHHH-HHHHHHHcCCCcc
Confidence 344578999999999999999999 9999999999999999999999987 45566655433332 3334467788888
Q ss_pred EEEEEEcCCCCEEEEEEEEEEEECCCCCEEEEEEEEEehH
Q 003963 203 GQFPAKTKTEERVLVVATNTPFYDDDGTLVGIVCVSTDSR 242 (783)
Q Consensus 203 ~e~~~~~kdG~~~~v~~~~~Pi~d~~G~v~g~v~i~rDIT 242 (783)
.++...+++|..+|+.++..|+.+.+|.+.+++++++|||
T Consensus 86 ~e~~~~~~~g~~~~~~~~~~~~~~~~g~~~~~~~~~~DIT 125 (125)
T 3eeh_A 86 VECRVNATEEYQRWVWIQGEPITNDAGETVRVAGFARDIT 125 (125)
T ss_dssp EEEEECGGGTTCEEEEEEEEEEECTTSCEEEEEEEEEECC
T ss_pred EEEEEEcCCCCEEEEEEecEEEECCCCCEEEEEEEEEecC
Confidence 8888899999999999999999999999999999999997
No 291
>1v9y_A Heme PAS sensor protein; signaling protein; HET: HEM; 1.32A {Escherichia coli} SCOP: d.110.3.2 PDB: 1v9z_A* 1vb6_A* 1s67_L* 1s66_L*
Probab=99.44 E-value=3.5e-13 Score=127.81 Aligned_cols=124 Identities=15% Similarity=0.238 Sum_probs=86.9
Q ss_pred HHHHHHHHHHhCcceEEEcCCCcEEEecHHHHHHcCCChhhHcCCCccccccccccchHHHHHHHHHHhCCe----EEEE
Q 003963 129 DRQYLNILQSMGQSVHIFDLSDRIIYWNRSAELLYGYSAEEALGQDAIELLTDGRDFDVAYDIVHRIKMGER----WTGQ 204 (783)
Q Consensus 129 ~~~~~~ile~~~d~I~i~D~~G~Ii~~N~aae~L~Gys~eEllG~~~~~l~~~~~~~~~~~~l~~~l~~g~~----~~~e 204 (783)
++.++.++++++++|+++|.+|+|+++|+++++++||+.++++|+++..++++.........+......+.. +..+
T Consensus 39 ~~~~~~~l~~~~~~i~~~d~~g~i~~~N~~~~~l~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 118 (167)
T 1v9y_A 39 DGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDLRPAHPEYIRHNREGGKARVEGMSRE 118 (167)
T ss_dssp -CCHHHHHHTCSSEEEEECTTSBEEEECHHHHHHHSCCGGGTTTSBGGGGSCGGGTTTHHHHHHHHHC----------CE
T ss_pred hHHHHHHHHhCCCCEEEECCCCcEEEECHHHHHHhCCCHHHHcCCChhhccCccccchHHHHHHHHhhcCCCcccccceE
Confidence 345899999999999999999999999999999999999999999999988776654433344444443333 3446
Q ss_pred EEEEcCCCCEEEEEEEEEEEECCCCCEEEEEEEEEehHHHHHHHHHHHHh
Q 003963 205 FPAKTKTEERVLVVATNTPFYDDDGTLVGIVCVSTDSRPFQETRAALWDT 254 (783)
Q Consensus 205 ~~~~~kdG~~~~v~~~~~Pi~d~~G~v~g~v~i~rDITerk~~E~~L~~~ 254 (783)
+...+++|..+|+.+...|+ +.+|.+ +++++++|||++++++++|+.+
T Consensus 119 ~~~~~~~g~~~~~~~~~~~~-~~~g~~-~~~~~~~DiT~~~~~e~~l~~l 166 (167)
T 1v9y_A 119 LQLEKKDGSKIWTRFALSKV-SAEGKV-YYLALVRDASVEMAQKEQTRQL 166 (167)
T ss_dssp EEEECTTSCEEEEEEEEEEE-EETTEE-EEEEEEEC--------------
T ss_pred EEEEcCCCcEEEEEEEEEEE-ecCCCE-EEEEEEecCcHHHHHHHHHHhh
Confidence 77789999999999999999 456766 4899999999999999887653
No 292
>3mfx_A Sensory BOX/ggdef family protein; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.40A {Shewanella oneidensis}
Probab=99.44 E-value=4.1e-13 Score=125.21 Aligned_cols=111 Identities=14% Similarity=0.093 Sum_probs=84.4
Q ss_pred HHHHHHHHHhCcceEEEcCCCcEEEecHHHHHHcCCChhhHcCCCccccccccccchHHHHHHHHHHhCC-------eEE
Q 003963 130 RQYLNILQSMGQSVHIFDLSDRIIYWNRSAELLYGYSAEEALGQDAIELLTDGRDFDVAYDIVHRIKMGE-------RWT 202 (783)
Q Consensus 130 ~~~~~ile~~~d~I~i~D~~G~Ii~~N~aae~L~Gys~eEllG~~~~~l~~~~~~~~~~~~l~~~l~~g~-------~~~ 202 (783)
+.++.++++++++|+++|.+|+|+++|++|++|+||+.++++|+++.+++++.........+......+. .+.
T Consensus 7 ~~l~~i~~~~~d~i~~~D~~g~I~~~N~aa~~l~G~~~~el~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (129)
T 3mfx_A 7 ETIELFIQHLTEAMILVNANGFIRSCNQRSAELLDCPQVSLKGQDWRNFLTEHHQARYDNLLSHDVQLGTNCGQPVQHPA 86 (129)
T ss_dssp HHHHHHHTTCSSEEEEEETTSBEEEECHHHHHHTTSCHHHHTTSBGGGGBCTTCCGGGGCTTC----------CCSCEEE
T ss_pred HHHHHHHhcCCceEEEECCCCEEEeEhHHHHHHHCcCHHHHcCCcHHHHcChHhHHHHHHHHHHHHhcCcccccccCCCc
Confidence 5688999999999999999999999999999999999999999999999987654321111111112222 245
Q ss_pred EEEEEEcCCCCEEEEEEEEEEEECCCCCEEEEEEEEEehHH
Q 003963 203 GQFPAKTKTEERVLVVATNTPFYDDDGTLVGIVCVSTDSRP 243 (783)
Q Consensus 203 ~e~~~~~kdG~~~~v~~~~~Pi~d~~G~v~g~v~i~rDITe 243 (783)
.++..+++||+.+|+.++++|+.+ ++.+ ++++++|+..
T Consensus 87 ~E~~~~rkdG~~~~velsis~i~~-~~~~--~v~~~~~~~~ 124 (129)
T 3mfx_A 87 QETTLICASGKAKDVELSISYIPG-HEPM--FVMVMHDLEH 124 (129)
T ss_dssp EEEEEECTTSCEEEEEEEEEEECS-SSCE--EEEEEEEC--
T ss_pred eEEEEEcCCCCEEEEEEEEEEecC-CCcE--EEEEEechhh
Confidence 688889999999999999999983 3322 7788899754
No 293
>1byw_A Protein (human ERG potassium channel); PAS domain, potassium channel domain, membrane protein; 2.60A {Homo sapiens} SCOP: d.110.3.6
Probab=99.43 E-value=1.4e-12 Score=112.67 Aligned_cols=104 Identities=17% Similarity=0.132 Sum_probs=88.1
Q ss_pred cceEEEcC---CCcEEEecHHHHHHcCCChhhHcCCC--ccccccccccchHHHHHHHHHHhCCeEEEEEEEEcCCCCEE
Q 003963 141 QSVHIFDL---SDRIIYWNRSAELLYGYSAEEALGQD--AIELLTDGRDFDVAYDIVHRIKMGERWTGQFPAKTKTEERV 215 (783)
Q Consensus 141 d~I~i~D~---~G~Ii~~N~aae~L~Gys~eEllG~~--~~~l~~~~~~~~~~~~l~~~l~~g~~~~~e~~~~~kdG~~~ 215 (783)
++|+++|. +|+|+++|+++++++||+.++++|++ ...+.++.........+...+..+..+..+...++++|..+
T Consensus 2 ~~i~i~d~~~~~g~i~~~N~~~~~~~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 81 (110)
T 1byw_A 2 RKFIIANARVENCAVIYCNDGFCELCGYSRAEVMQRPCTCDFLHGPCTQRRAAAQIAQALLGAEERKVEIAFYRKDGSCF 81 (110)
T ss_dssp CEEEEEETTSSSCBEEEECHHHHHHHTCCHHHHTTSBTTCGGGCCTTCCHHHHHHHHHHHHTTCCEEEEEEEECTTSCEE
T ss_pred CCEEEEeccCCCCcEEEECHHHHHHhCCCHHHHccCCCccccccCCcCCHHHHHHHHHHHhcCCCceEEEEEEcCCCCEE
Confidence 57899997 59999999999999999999999998 34444444333445567778888888888888899999999
Q ss_pred EEEEEEEEEECCCCCEEEEEEEEEehHHH
Q 003963 216 LVVATNTPFYDDDGTLVGIVCVSTDSRPF 244 (783)
Q Consensus 216 ~v~~~~~Pi~d~~G~v~g~v~i~rDITer 244 (783)
|+.++..|+.+.+|.+.+++++++|||++
T Consensus 82 ~~~~~~~~~~~~~g~~~~~~~~~~DiTe~ 110 (110)
T 1byw_A 82 LCLVDVVPVKNEDGAVIMFILNFEVVMEK 110 (110)
T ss_dssp EEEEEEEEEECTTCCEEEEEEEEEEEEEC
T ss_pred EEEEEEEEeecCCCCEEEEEEEEEeccCC
Confidence 99999999999999999999999999963
No 294
>2l0w_A Potassium voltage-gated channel, subfamily H (EAG member 2, isoform CRA_B; HERG, PAS domain, voltage-gated potassium channel, membrane; NMR {Homo sapiens} PDB: 2l1m_A 2l4r_A
Probab=99.43 E-value=9.2e-13 Score=119.37 Aligned_cols=113 Identities=16% Similarity=0.135 Sum_probs=94.9
Q ss_pred HHHHHHHhCcceEEEcC---CCcEEEecHHHHHHcCCChhhHcCCC--ccccccccccchHHHHHHHHHHhCCeEEEEEE
Q 003963 132 YLNILQSMGQSVHIFDL---SDRIIYWNRSAELLYGYSAEEALGQD--AIELLTDGRDFDVAYDIVHRIKMGERWTGQFP 206 (783)
Q Consensus 132 ~~~ile~~~d~I~i~D~---~G~Ii~~N~aae~L~Gys~eEllG~~--~~~l~~~~~~~~~~~~l~~~l~~g~~~~~e~~ 206 (783)
+...+++++++|+++|. +|+|+++|+++++++||+.++++|++ +..+.++.........+...+..+..+..+..
T Consensus 21 ~~~~~~~~~~~i~~~d~~~~~g~i~~~N~~~~~l~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (138)
T 2l0w_A 21 IIRKFEGQSRKFIIANARVENCAVIYCNDGFCELCGYSRAEVMQRPCTCDFLHGPRTQRRAAAQIAQALLGAEERKVEIA 100 (138)
T ss_dssp HHHHHTTTTSEEEEEESSSTTCBEEEECSHHHHHHSCCHHHHTTSBTTCGGGCCTTCCHHHHHHHHHHTTCSSCEEEEEE
T ss_pred HHHHHhcCCCCEEEEecCCCCCEEEEeCHHHHHHhCCCHHHHcCCCCcccccCCcccchhHHHHHHHHHhhcCCceeEEE
Confidence 44445559999999999 99999999999999999999999999 45455554444444556777777777888888
Q ss_pred EEcCCCCEEEEEEEEEEEECCCCCEEEEEEEEEehHHH
Q 003963 207 AKTKTEERVLVVATNTPFYDDDGTLVGIVCVSTDSRPF 244 (783)
Q Consensus 207 ~~~kdG~~~~v~~~~~Pi~d~~G~v~g~v~i~rDITer 244 (783)
..+++|..+|+.+++.|+.+.+|.+.+++++++|||++
T Consensus 101 ~~~~~g~~~~~~~~~~~~~~~~g~~~~~~~~~~Dit~~ 138 (138)
T 2l0w_A 101 FYRKDGSCFLCLVDVVPVKNEDGAVIMFILNFEVVMEK 138 (138)
T ss_dssp EECTTSCEEEEEEEEEEEECTTSCEEEEEEEEEEEEEC
T ss_pred EECCCCCEEEEEEEEEEEeCCCCCEEEEEEEEEeccCC
Confidence 88999999999999999999999999999999999863
No 295
>3d72_A Vivid PAS protein VVD; circadian, photoreceptor, blue-light, LOV, signaling protein; HET: FAD; 1.65A {Neurospora crassa} PDB: 3is2_A* 2pd8_A* 3hjk_A* 2pdr_A* 2pd7_A* 2pdt_A* 3hji_A* 3rh8_B*
Probab=99.41 E-value=1.2e-12 Score=122.78 Aligned_cols=105 Identities=17% Similarity=0.205 Sum_probs=92.3
Q ss_pred HHHHhCcceEEEc---CCCcEEEecHHHHHHcCCChhhHcCCCccccccccc-----------cchHHHHHHHHHHhCCe
Q 003963 135 ILQSMGQSVHIFD---LSDRIIYWNRSAELLYGYSAEEALGQDAIELLTDGR-----------DFDVAYDIVHRIKMGER 200 (783)
Q Consensus 135 ile~~~d~I~i~D---~~G~Ii~~N~aae~L~Gys~eEllG~~~~~l~~~~~-----------~~~~~~~l~~~l~~g~~ 200 (783)
+++. +++|+++| .+|+|+|+|+++++++||+.+|++|+++..+++++. .......+...+..+..
T Consensus 31 ~~~~-~~~i~~~d~~d~~g~i~~~N~a~~~l~G~~~~el~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 109 (149)
T 3d72_A 31 PVDT-SVALILCDLKQKDTPIVYASEAFLYMTGYSNAEVLGRNCRFLQSPDGMVKPKSTRKYVDSNTINTMRKAIDRNAE 109 (149)
T ss_dssp SCCT-TSCEEEEETTSTTCCEEEECHHHHHHHCCCHHHHTTSCGGGGGSTTSCCCTTCCCSSSCHHHHHHHHHHHHHTCC
T ss_pred hhcC-CccEEEEeccCCCCcEEEECHHHHHHHCcCHHHHcCCChhHhCCccccccccccccccChHHHHHHHHHHHCCCc
Confidence 3445 38999999 799999999999999999999999999998887763 44445567788888888
Q ss_pred EEEEEEEEcCCCCEEEEEEEEEEEECCCCCEEEEEEEEEe
Q 003963 201 WTGQFPAKTKTEERVLVVATNTPFYDDDGTLVGIVCVSTD 240 (783)
Q Consensus 201 ~~~e~~~~~kdG~~~~v~~~~~Pi~d~~G~v~g~v~i~rD 240 (783)
+..+...+++||..+|+.+++.|+++.+|++.+++++++|
T Consensus 110 ~~~e~~~~~~dG~~~~~~~~~~~i~~~~g~~~~~v~~~~D 149 (149)
T 3d72_A 110 VQVEVVNFKKNGQRFVNFLTMIPVRDETGEYRYSMGFQCE 149 (149)
T ss_dssp EEEEEEEECTTCCEEEEEEEEEEEECTTSSEEEEEEECCC
T ss_pred eEEEEEEECCCCCEEEEEEEEEEEEcCCCCEEEEEEEEeC
Confidence 8889999999999999999999999999999999999887
No 296
>3bwl_A Sensor protein; structural genomics, APC87707.1, PAS domain, HTR-like protei protein structure initiative; HET: MSE I3A; 1.73A {Haloarcula marismortui atcc 43049}
Probab=99.38 E-value=2.8e-12 Score=116.57 Aligned_cols=110 Identities=14% Similarity=0.115 Sum_probs=82.2
Q ss_pred CHHHHHHHHHHhCcceEEEcCCCcEEEecHHHHHHcCCChhhH--cCCCccccccccccchHHHHHHHHHHhCCeEEEEE
Q 003963 128 TDRQYLNILQSMGQSVHIFDLSDRIIYWNRSAELLYGYSAEEA--LGQDAIELLTDGRDFDVAYDIVHRIKMGERWTGQF 205 (783)
Q Consensus 128 ~~~~~~~ile~~~d~I~i~D~~G~Ii~~N~aae~L~Gys~eEl--lG~~~~~l~~~~~~~~~~~~l~~~l~~g~~~~~e~ 205 (783)
.++.|+.++++++++|+++|.+|+|+++|+++++++||+.+|+ +|+++..+++ .. ......+.....+.....+.
T Consensus 15 ~~~~~~~l~e~~~~~i~~~d~~g~i~~~N~a~~~~~G~~~~el~g~g~~~~~~~~--~~-~~~~~~~~~~~~~~~~~~e~ 91 (126)
T 3bwl_A 15 TSSRLEALFENSPDMIDVLDADGTICEVNQRFCAELGYDESEVLGRSIWEFDLMF--DA-EDVQTQLSGFSVDERRKFEG 91 (126)
T ss_dssp HHHHHHHHHHHCSSEEEEECTTCBEEEECHHHHHHHTCCGGGTTTSBGGGTBTTC--CH-HHHHHHHHTCCTTCEEEEEE
T ss_pred HHHHHHHHHhhCCcEEEEEcCCCCEEEEcHHHHHHhCCCHHHHhhCCCchhhccC--CH-HHHHHHHHHHhcCCCcceEE
Confidence 3567899999999999999999999999999999999999999 5677777765 21 11111111122334455566
Q ss_pred EEEcCCCCEEEEEEEEEEEECCCCCEEEEEEEEEehH
Q 003963 206 PAKTKTEERVLVVATNTPFYDDDGTLVGIVCVSTDSR 242 (783)
Q Consensus 206 ~~~~kdG~~~~v~~~~~Pi~d~~G~v~g~v~i~rDIT 242 (783)
...++||..+|+.++..++.+ +|.. +++++++|||
T Consensus 92 ~~~~~dG~~~~~~~~~~~~~~-~~~~-~~~~~~~DIT 126 (126)
T 3bwl_A 92 LYERRDGSTMSVEVHLLRFNL-EGED-RFLAISRDIT 126 (126)
T ss_dssp EEECTTSCEEEEEEEEEEEEE-TTEE-EEEEEEEEC-
T ss_pred EEEeCCCCEEEEEEEeEEEec-CCcE-EEEEEEEeCC
Confidence 777999999999999888753 4543 5788999997
No 297
>3b33_A Sensor protein; structural genomics, PAS domain, nitrogen regulation protein APC91440.4, PSI-2; HET: MSE; 1.83A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.38 E-value=2e-12 Score=115.67 Aligned_cols=108 Identities=18% Similarity=0.146 Sum_probs=88.4
Q ss_pred HHHHHHHHHhCcceEEEcCCCcEEEecHHHHHHcCCChhhHcCCCccccccccccchHHHHHHHHHHhCCeE-EEEEEEE
Q 003963 130 RQYLNILQSMGQSVHIFDLSDRIIYWNRSAELLYGYSAEEALGQDAIELLTDGRDFDVAYDIVHRIKMGERW-TGQFPAK 208 (783)
Q Consensus 130 ~~~~~ile~~~d~I~i~D~~G~Ii~~N~aae~L~Gys~eEllG~~~~~l~~~~~~~~~~~~l~~~l~~g~~~-~~e~~~~ 208 (783)
.....++++++++|+++|.+|+|+++|++|++++|++.++++|+++.+++++... ....+.+++..+... ..+....
T Consensus 7 ~l~~~il~~~~~~i~~~D~~g~I~~~N~aa~~l~g~~~~~~~g~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 84 (115)
T 3b33_A 7 SLPSAILNNMVTATLILDDGLAIRYANPAAELLFSQSAKRIVEQSLSQLIQHASL--DLALLTQPLQSGQSITDSDVTFV 84 (115)
T ss_dssp CHHHHHHHHCSSEEEEECTTCBEEEECHHHHHHTTSCHHHHTTCBHHHHCSEEEC--CTHHHHHHHHHCCCEEEEEEEEE
T ss_pred ccHHHHHhhcCceEEEECCCCcEEEECHHHHHHhCCCHHHHhCCCHHHHhCccch--hhHHHHHHHHcCCcccCCceEEe
Confidence 4567799999999999999999999999999999999999999999998765432 122355667777664 3455555
Q ss_pred cCCCCEEEEEEEEEEEECCCCCEEEEEEEEEehH
Q 003963 209 TKTEERVLVVATNTPFYDDDGTLVGIVCVSTDSR 242 (783)
Q Consensus 209 ~kdG~~~~v~~~~~Pi~d~~G~v~g~v~i~rDIT 242 (783)
++|..+|+.+++.|+.+ +|. .+++.+++||+
T Consensus 85 -~~g~~~~~~~~~~pi~~-~g~-~~~l~~~~Di~ 115 (115)
T 3b33_A 85 -VDGRPLMLEVTVSPITW-QRQ-LMLLVEMRKID 115 (115)
T ss_dssp -ETTEEEEEEEEEEEEEE-TTE-EEEEEEEEEC-
T ss_pred -cCCCEEEEEEEEEEeec-CCc-eEEEEEEEeCC
Confidence 78999999999999998 776 68999999985
No 298
>4hi4_A Aerotaxis transducer AER2; PAS domain, diatomic GAS sensor, signaling protein; HET: HEM GOL; 2.30A {Pseudomonas aeruginosa}
Probab=99.38 E-value=1.6e-12 Score=118.62 Aligned_cols=105 Identities=16% Similarity=0.220 Sum_probs=80.6
Q ss_pred HHHHHHHHHhCcceEEEcCCCcEEEecHHHHHHcC------------CChhhHcCCCccccccccccchHHHHHHHHHHh
Q 003963 130 RQYLNILQSMGQSVHIFDLSDRIIYWNRSAELLYG------------YSAEEALGQDAIELLTDGRDFDVAYDIVHRIKM 197 (783)
Q Consensus 130 ~~~~~ile~~~d~I~i~D~~G~Ii~~N~aae~L~G------------ys~eEllG~~~~~l~~~~~~~~~~~~l~~~l~~ 197 (783)
.+++.+|++++++|+++|.+|+|+|+|++|++|+| |+.++++|+++.++++... ....+.....
T Consensus 5 ~rl~~il~~~~~gviv~D~~g~I~~~N~a~~~llg~~~~~i~~~~~g~~~~~~~G~~~~~~~~~~~---~~~~~~~~~~- 80 (121)
T 4hi4_A 5 ARIASALDNVSANVMIADNDLNIIYMNRTVSEMLGRAEADIRKQLPNFDAGRLMGANIDVFHKNPA---HQRHLLANLT- 80 (121)
T ss_dssp HHHHHHHTTSSSEEEEEETTCBEEEECHHHHHHHHHTHHHHHHHCTTCCGGGCTTCBGGGGCSSHH---HHHHHHHHCS-
T ss_pred HHHHHHHhcCCccEEEEcCCCeEEEecHHHHHHHHHHHHHHHHhcCCCChHHhcCCCHHHhcCCHH---HHHHHHhCcC-
Confidence 56899999999999999999999999999999995 8999999999998875321 1122222222
Q ss_pred CCeEEEEEEEEcCCCCEEEEEEEEEEEECCCCCEEEEEEEEEehHHH
Q 003963 198 GERWTGQFPAKTKTEERVLVVATNTPFYDDDGTLVGIVCVSTDSRPF 244 (783)
Q Consensus 198 g~~~~~e~~~~~kdG~~~~v~~~~~Pi~d~~G~v~g~v~i~rDITer 244 (783)
..+..++. .+|. ++.++++||+|.+|++.|++++++|||+.
T Consensus 81 -~~~~~~~~---~~~~--~~~~~~~pi~~~~g~~~g~v~~~~DiTee 121 (121)
T 4hi4_A 81 -GVHKAELN---LGGR--RFSLDVVPVFNDANARLGSAVQWTDRTEE 121 (121)
T ss_dssp -SCEEEEEE---ETTE--EEEEEEEEEECTTSCEEEEEEEEEECC--
T ss_pred -CCcEEEEE---ECCE--EEEEEEEEEECCCCCEEEEEEEEEEecCC
Confidence 23343332 2453 45788999999999999999999999973
No 299
>3fg8_A Uncharacterized protein RHA05790; PAS domain, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; HET: 3PB; 1.80A {Rhodococcus SP}
Probab=99.31 E-value=1e-12 Score=119.34 Aligned_cols=107 Identities=17% Similarity=0.079 Sum_probs=86.8
Q ss_pred HHHHHHHHHhCcceEEEcCCCcEEEecHHHHHHcCCChhhHcCCCccccccccccchHHHHHHHHHHhCCeEEEEEEEEc
Q 003963 130 RQYLNILQSMGQSVHIFDLSDRIIYWNRSAELLYGYSAEEALGQDAIELLTDGRDFDVAYDIVHRIKMGERWTGQFPAKT 209 (783)
Q Consensus 130 ~~~~~ile~~~d~I~i~D~~G~Ii~~N~aae~L~Gys~eEllG~~~~~l~~~~~~~~~~~~l~~~l~~g~~~~~e~~~~~ 209 (783)
..++.++++++++|+++|.+|+|+++|+++++++|++.++++|+++.+++++.........+.+++..|+....++....
T Consensus 12 ~~~~~il~~~~~~i~~~D~~g~i~~~N~a~~~l~g~~~~e~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (118)
T 3fg8_A 12 SGRENLYFQGGLGFMALDEDLRIIYVNSGCLRHVRRSRDELLGRVVTEVLPETQGSYFDALCRKVLATGREQQTRVDSLY 91 (118)
T ss_dssp -CCCCSSSCTTCEEEEECTTCBEEEECHHHHHHHTCCHHHHTTSBHHHHCGGGTTSHHHHHHHHHHHHCCCEEEEEECSS
T ss_pred chHHHHHhhCCceEEEECCCCeEEEECHHHHHHhCCCHHHHcCCcHHHHcCccchHHHHHHHHHHHHcCCceEEEEEEEc
Confidence 45677899999999999999999999999999999999999999999998776555555567788888988776433333
Q ss_pred CCCCEEEEEEEEEEEECCCCCEEEEEEEEEehHHH
Q 003963 210 KTEERVLVVATNTPFYDDDGTLVGIVCVSTDSRPF 244 (783)
Q Consensus 210 kdG~~~~v~~~~~Pi~d~~G~v~g~v~i~rDITer 244 (783)
.+| .|+.+++.|+.+ |++++++|||++
T Consensus 92 ~~g--~~~~~~~~p~~~------g~v~~~~DITer 118 (118)
T 3fg8_A 92 SPG--MTIEVTAAADSG------ALVVHFRDVTAE 118 (118)
T ss_dssp STT--CEEEEEEEEETT------EEEEEEEECSCC
T ss_pred CCC--eEEEEEEEEcCC------cEEEEEEeccCC
Confidence 466 577888888753 378899999974
No 300
>3fc7_A HTR-like protein, sensor protein; APC87712.1, HTR-like protein,haloarcula marismortui ATCC 430 structural genomics, PSI-2; 2.65A {Haloarcula marismortui}
Probab=99.31 E-value=9.8e-13 Score=118.70 Aligned_cols=108 Identities=11% Similarity=0.064 Sum_probs=77.1
Q ss_pred CHHHHHHHHHHhCcceEEEcCCCcEEEecHHHHHHcCCChhhHcCCCccccccccccchHHHHHHHHHHhCCeEEEEEEE
Q 003963 128 TDRQYLNILQSMGQSVHIFDLSDRIIYWNRSAELLYGYSAEEALGQDAIELLTDGRDFDVAYDIVHRIKMGERWTGQFPA 207 (783)
Q Consensus 128 ~~~~~~~ile~~~d~I~i~D~~G~Ii~~N~aae~L~Gys~eEllG~~~~~l~~~~~~~~~~~~l~~~l~~g~~~~~e~~~ 207 (783)
.++.|+.++++++++|+++|.+|+|+++|+++++++||+.++++|+++.+++++.............+..++..
T Consensus 17 ~~~~~~~i~~~~~~~i~~~d~~g~i~~~N~~~~~~~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------ 90 (125)
T 3fc7_A 17 TRKKFESLVSDSPDGIVHLTTNGTILSVNPSMAGRLGADPDTLVGQQLSAVMDSEAANQRLEAGKSAVENGTAT------ 90 (125)
T ss_dssp ---------CCSCCEEEEEETTSBEEEECHHHHHHHTSCHHHHTTSBGGGSSCHHHHHHHHHHHHHHHHHTSCE------
T ss_pred HHHHHHHHHhcCCCeEEEEcCCCeEEEECHHHHHHhCCCHHHHcCccHHHhCCHHHHHHHHHHHHHHhcCCCeE------
Confidence 45779999999999999999999999999999999999999999999999884332222222224556666644
Q ss_pred EcCCCC-EEEEEEEEEEEECCCCCEEEEEEEEEehH
Q 003963 208 KTKTEE-RVLVVATNTPFYDDDGTLVGIVCVSTDSR 242 (783)
Q Consensus 208 ~~kdG~-~~~v~~~~~Pi~d~~G~v~g~v~i~rDIT 242 (783)
..++|. .+|+.+++.|+.+. |.+.|++++++|||
T Consensus 91 ~~~~~~~~~~~~~~~~p~~~~-~~~~~~~~~~~DIT 125 (125)
T 3fc7_A 91 RSEDAVGGRHYHNQYIPVDSH-RKSDTFQLVSRDIT 125 (125)
T ss_dssp EEEEEETTEEEEEEEEESSTT-TTTTEEEEEEEECC
T ss_pred EeEcCCCcEEEEEEEEeEecC-CCeEEEEEEEecCC
Confidence 223444 68899999998764 66678999999997
No 301
>4eho_A Bacteriophytochrome, PAS/PAC sensor; photoreceptor, bacteriopbhytochrome; HET: MSE BLA; 2.90A {Rhodopseudomonas palustris tie-1}
Probab=99.29 E-value=3.4e-13 Score=158.88 Aligned_cols=116 Identities=16% Similarity=0.216 Sum_probs=104.7
Q ss_pred HHHHHHHhCcceEEEcCCCcEEEecHHHHHHcCCChhhHcCCCccccccccccchHHHHHHHHHHhCCeEEEEEEEEcCC
Q 003963 132 YLNILQSMGQSVHIFDLSDRIIYWNRSAELLYGYSAEEALGQDAIELLTDGRDFDVAYDIVHRIKMGERWTGQFPAKTKT 211 (783)
Q Consensus 132 ~~~ile~~~d~I~i~D~~G~Ii~~N~aae~L~Gys~eEllG~~~~~l~~~~~~~~~~~~l~~~l~~g~~~~~e~~~~~kd 211 (783)
+..++++.+++|+++|.+|+|+|||++|++|+||+.+|++|++...+.+++.. .....+.+.+..|+.+..+++++++|
T Consensus 520 ~~~lle~a~~~i~~~D~~grI~~~N~a~~~l~G~s~~e~~g~~~l~~~~~~~~-~~~~~i~~~l~~g~~~~~E~~~~~~d 598 (635)
T 4eho_A 520 ASSQVHASMQPVLITDAEGRILLMNDSFRDMLPAGSPSAVHLDDLAGFFVESN-DFLRNVAELIDHGRGWRGEVLLRGAG 598 (635)
T ss_dssp HHHHHHHCSSCCEEEETTCCEEEECHHHHTTSCSSCCCCCSSGGGTTSSSSCT-HHHHHHHHHHHHCCCBCCCCEECCSS
T ss_pred HHHHHHhCCCcEEEECCCCeEeeHHHHHHHHHCcChHHHcCcchhhccCCCCH-HHHHHHHHHHHcCCcEEEEEEEEccC
Confidence 45678999999999999999999999999999999999999988777766653 44566788888999999999999999
Q ss_pred CCEEEEEEEEEEEECCCCCEEEEEEEEEehHHHHHHH
Q 003963 212 EERVLVVATNTPFYDDDGTLVGIVCVSTDSRPFQETR 248 (783)
Q Consensus 212 G~~~~v~~~~~Pi~d~~G~v~g~v~i~rDITerk~~E 248 (783)
|+.+|+.+++.|++|.+|+++|++++++|||++|++|
T Consensus 599 G~~~~~~~~~~pv~d~~G~v~g~v~i~~DITerK~aE 635 (635)
T 4eho_A 599 NRPLPLAVRADPVTRTEDQSLGFVLIFSDATDRRTAD 635 (635)
T ss_dssp SSCEECCCCEEEECSTTSSCCEEEECCCCCSSSCCCC
T ss_pred CcEEEEEEEEEEEECCCCCEEEEEEEEEeCchHhhCC
Confidence 9999999999999999999999999999999998754
No 302
>3cax_A Uncharacterized protein PF0695; structural genomics, unknown function, PSI-2, protein struct initiative; 2.43A {Pyrococcus furiosus dsm 3638}
Probab=99.22 E-value=1.5e-11 Score=135.38 Aligned_cols=119 Identities=17% Similarity=0.324 Sum_probs=99.1
Q ss_pred CCCHHHHHHHHHHhCcceEEEcCCCcEEEecHHHHHHcCCChhhHcCCCccccccccccchHHHHHHHHHHhCCeEEEEE
Q 003963 126 NFTDRQYLNILQSMGQSVHIFDLSDRIIYWNRSAELLYGYSAEEALGQDAIELLTDGRDFDVAYDIVHRIKMGERWTGQF 205 (783)
Q Consensus 126 ~~~~~~~~~ile~~~d~I~i~D~~G~Ii~~N~aae~L~Gys~eEllG~~~~~l~~~~~~~~~~~~l~~~l~~g~~~~~e~ 205 (783)
.+..+.++.||+++++||+++|.+|+|+|+|++ ++++ ++.++++|+++.+++++.. ....+.+..++++|+....++
T Consensus 235 ~~~~~~l~~IL~~l~dgIivvD~~g~I~~~N~a-e~i~-~~~~e~iGr~v~~~~p~~~-~~~~~~l~~~l~~g~~~~~~~ 311 (369)
T 3cax_A 235 YLNIEELKAIFEALPVDVTFIDKDDRVRFFSPG-ERIF-TRTPSVLGRPVQLCHPPKS-VYVVNKILKAFKEGRKKEATF 311 (369)
T ss_dssp EECHHHHHHHHHHSSSEEEEECTTSBEEEECCS-SCSS-CCCGGGTTCBTTTSSCGGG-HHHHHHHHHHHHHTSCSCEEE
T ss_pred hhhHHHHHHHHHhCCCcEEEECCCCcEEEEcCH-HHcc-CChHHHcCCcHHHHCChhh-HHHHHHHHHHHHcCCceEEEE
Confidence 355688999999999999999999999999999 9999 9999999999999887543 334456778888888755555
Q ss_pred EEEcCCCCEEEEEEEEEEEECCCCCEEEEEEEEEehHHHHHHHHH
Q 003963 206 PAKTKTEERVLVVATNTPFYDDDGTLVGIVCVSTDSRPFQETRAA 250 (783)
Q Consensus 206 ~~~~kdG~~~~v~~~~~Pi~d~~G~v~g~v~i~rDITerk~~E~~ 250 (783)
... .+| .++.++.+||+|.+|+++|++.+++|||++++++++
T Consensus 312 ~~~-~~g--~~v~v~~~PI~d~~G~~~G~v~v~~DITe~~~le~~ 353 (369)
T 3cax_A 312 WLR-LRE--KYVYIKYVPLFNEKGEYIGTLEMTMDIAPYKKIEGE 353 (369)
T ss_dssp EEE-ETT--EEEEEEEEEEECTTSCEEEEEEEEEECHHHHTCCSC
T ss_pred EEe-eCC--EEEEEEEEEEECCCCCEEEEEEEEEcCHHHHHHHHH
Confidence 443 346 578889999999999999999999999998876543
No 303
>3a0r_A Sensor protein; four helix bundle, PAS fold, kinase, phosphoprotein, transfe two-component regulatory system; 3.80A {Thermotoga maritima}
Probab=99.21 E-value=9.2e-13 Score=142.78 Aligned_cols=145 Identities=17% Similarity=0.181 Sum_probs=107.9
Q ss_pred HHHHHHHHHHhCcceEEEcCCCcEEEecHHHHHHcCCChhhHcCCCccccccccccchHHHHHHHHHHhCCeEEEEEEEE
Q 003963 129 DRQYLNILQSMGQSVHIFDLSDRIIYWNRSAELLYGYSAEEALGQDAIELLTDGRDFDVAYDIVHRIKMGERWTGQFPAK 208 (783)
Q Consensus 129 ~~~~~~ile~~~d~I~i~D~~G~Ii~~N~aae~L~Gys~eEllG~~~~~l~~~~~~~~~~~~l~~~l~~g~~~~~e~~~~ 208 (783)
.++++.++++++++|+++|.+|+|++||++|++++||+.++++|+++.++..+. .....+...+..+......
T Consensus 7 ~~~~~~i~~~~~~~i~~~d~~g~i~~~N~a~~~l~G~~~~e~~G~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~---- 79 (349)
T 3a0r_A 7 RNFSESILESLETAIITLSKDGRITEWNKKAEQLFGLKKENVLGRRLKDLPDFE---EIGSVAESVFENKEPVFLN---- 79 (349)
T ss_dssp --CCCSSGGGSSSEEEEEESSSBCSCBCHHHHHHHSCCSTTTTTCBSTTSTTTT---HHHHHHHHHHHHCCCCEEE----
T ss_pred HHHHHHHHhhhcCeEEEECCCCCEEeeHHHHHHHhCCCHHHHcCcCHHHCcChh---HHHHHHHHHHhcCCceeec----
Confidence 345778999999999999999999999999999999999999999999883322 2223345556666654322
Q ss_pred cCCCCEEEEEEEEEEEECCCCCE-EEEEEEEEehHHHHHHHHHHHHhhccccccccCCchhHHHHhhcCCchhHHHHHHH
Q 003963 209 TKTEERVLVVATNTPFYDDDGTL-VGIVCVSTDSRPFQETRAALWDTKNSDTDSNINRPRNTVTAKLGLDSQQPLQATIA 287 (783)
Q Consensus 209 ~kdG~~~~v~~~~~Pi~d~~G~v-~g~v~i~rDITerk~~E~~L~~~~~~~~~~~~~~~~~~l~~~l~~d~~qpl~~~i~ 287 (783)
...+..+|+.+...|+.+.+|.. .|++++++|||+++++++++++.... .....|++.++||+++||+.+..
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~DiTe~~~~e~~~~~~~~~-------~~~~~~~~~i~Helr~pL~~i~~ 152 (349)
T 3a0r_A 80 FYKFGERYFNIRFSPFRNAKTQLLEGVIITIDDVTELYKYEEERKRRERL-------SILGEMTARVAHEIRNPITIIGG 152 (349)
T ss_dssp CCCBTTBCCEEEEEEECCTTTTSSCEEEEEEECCSTTTTTTTTTTHHHHH-------HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccccCceEEEEEEEEEEcCCCceeeEEEEEEEechHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHhcchHHHHHH
Confidence 12223357888999999888765 58999999999999887766443221 12345889999999999977543
No 304
>2vlg_A Sporulation kinase A; histidine kinase, two-component regulatory system, two-component signal transduction, transferase, phosphorylation, SCOD; 1.7A {Bacillus subtilis}
Probab=99.21 E-value=2.5e-11 Score=109.99 Aligned_cols=92 Identities=21% Similarity=0.166 Sum_probs=68.6
Q ss_pred HHHHHhCcceEEEcCCCcEEEecHHHHHHcCCChhhHcCCCccccccccccchHHHHHHHHHHh-CCeEEEEEEEEcCCC
Q 003963 134 NILQSMGQSVHIFDLSDRIIYWNRSAELLYGYSAEEALGQDAIELLTDGRDFDVAYDIVHRIKM-GERWTGQFPAKTKTE 212 (783)
Q Consensus 134 ~ile~~~d~I~i~D~~G~Ii~~N~aae~L~Gys~eEllG~~~~~l~~~~~~~~~~~~l~~~l~~-g~~~~~e~~~~~kdG 212 (783)
.+++++++.|+++|.+|+|+|+|+++++++||+.+|++|+++.++++|++..... ..+.. +.....+++++++||
T Consensus 3 ~lle~~~d~i~v~d~~G~i~yvn~~~~~~lGy~~~el~G~~~~~~ihp~D~~~~~----~~~~~~~~~~~~e~r~~~kdG 78 (111)
T 2vlg_A 3 FPLQTKTDIHAVLASNGRIIYISANSKLHLGYLQGEMIGSFLKTFLHEEDQFLVE----SYFYNEHHLMPCTFRFIKKDH 78 (111)
T ss_dssp ------CCEEEEECTTSBEEEECTTHHHHHSCCHHHHTTSBGGGGBCGGGHHHHH----HHHHCSCCSSCEEEEEECTTS
T ss_pred chhhcCCCEEEEEcCCCeEEEEChHHHHHhCCCHHHHcCCcHHHeECHhHHHHHH----HHHhccCCCccEEEEEEcCCC
Confidence 5789999999999999999999999999999999999999999999988754332 22322 333455788889999
Q ss_pred CEEEEEEEEEEEECCCC
Q 003963 213 ERVLVVATNTPFYDDDG 229 (783)
Q Consensus 213 ~~~~v~~~~~Pi~d~~G 229 (783)
+.+|+.+++.++.+.++
T Consensus 79 ~~~wve~~~~~v~~~~~ 95 (111)
T 2vlg_A 79 TIVWVEAAVEIVTTRAE 95 (111)
T ss_dssp CEEEEEEEEEEC-----
T ss_pred CEEEEEEEEEEEecccC
Confidence 99999999999987654
No 305
>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*
Probab=99.20 E-value=3e-11 Score=125.84 Aligned_cols=142 Identities=15% Similarity=0.031 Sum_probs=110.2
Q ss_pred ccceeEeeeeccCCcEEEEEEEEeCCceEEEEEEecccCCHHHHHHHHHHHHHHHhCC-CCceeeEeceeecCCceEEEE
Q 003963 504 WEDLTIGEQIGQGSCGTVYHAVWYGSQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLR-HPNVLLFMGAVTSPQRLCIVT 582 (783)
Q Consensus 504 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~-HpnIv~l~~~~~~~~~~~lV~ 582 (783)
...|++...++.|+++.||++... ++.+++|+........ ...+.+|+.+++.+. +..++++++++...+..|+||
T Consensus 13 l~~~~~~~~~~g~s~~~v~~~~~~-~~~~vlK~~~~~~~~~--~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv~ 89 (263)
T 3tm0_A 13 IEKYRCVKDTEGMSPAKVYKLVGE-NENLYLKMTDSRYKGT--TYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNLLM 89 (263)
T ss_dssp HTTSEEEECCSCCSSSEEEEEECS-SCEEEEEEECGGGTTS--TTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEE
T ss_pred hccceeEeeccCCCCCeEEEEECC-CCcEEEEeCCcccCCC--HHHHHHHHHHHHHHhcCCCCCeEEEEEecCCceEEEE
Confidence 457889999999999999999744 5789999987532111 135778999999885 677889999998888999999
Q ss_pred EecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCC--------------------------------------
Q 003963 583 EFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCN-------------------------------------- 624 (783)
Q Consensus 583 E~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~-------------------------------------- 624 (783)
||++|.+|.+.+.. ......++.+++.+|..||+..
T Consensus 90 e~i~G~~l~~~~~~------~~~~~~~~~~l~~~l~~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (263)
T 3tm0_A 90 SEADGVLCSEEYED------EQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCENWEEDTP 163 (263)
T ss_dssp ECCSSEEHHHHCCT------TTCHHHHHHHHHHHHHHHHHSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCSGGGGSTTCS
T ss_pred EecCCeehhhccCC------cccHHHHHHHHHHHHHHHhCCCcccCCCcchHHHHHHHHHHHHhcccccccccccccccc
Confidence 99999998876421 1123366778999999999810
Q ss_pred -------------------CCEEecCCCCCCEEEcCCCcEEEEecCCCc
Q 003963 625 -------------------PPIIHRDLKSSNLLVDKHWTVKVGDFGLSR 654 (783)
Q Consensus 625 -------------------~~IvHrDIKp~NILl~~~~~vkL~DFGla~ 654 (783)
..++|+|++|.|||++++..+.|+||+.+.
T Consensus 164 ~~~~~~l~~~l~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~lIDwe~a~ 212 (263)
T 3tm0_A 164 FKDPRELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSG 212 (263)
T ss_dssp SSSHHHHHHHHHHCCCCCCEEEECSSCCTTSEEEETTEEEEECCCTTCE
T ss_pred CCCHHHHHHHHHhcCCCCCceEECCCCCcCcEEEECCcEEEEEEchhcc
Confidence 228999999999999876556799999774
No 306
>4f3l_A Mclock, circadian locomoter output cycles protein kaput; BHLH, PAS, circadian rhythm proteins, transcription-activato; 2.27A {Mus musculus}
Probab=99.19 E-value=4e-11 Score=131.66 Aligned_cols=109 Identities=16% Similarity=0.138 Sum_probs=97.6
Q ss_pred CcceEEEcCCCcEEEecHHHHHHcCCChhhHcCCCccccccccccchHHHHHHHHHHhCCeEEEEEEEEcCCCCEEEEEE
Q 003963 140 GQSVHIFDLSDRIIYWNRSAELLYGYSAEEALGQDAIELLTDGRDFDVAYDIVHRIKMGERWTGQFPAKTKTEERVLVVA 219 (783)
Q Consensus 140 ~d~I~i~D~~G~Ii~~N~aae~L~Gys~eEllG~~~~~l~~~~~~~~~~~~l~~~l~~g~~~~~e~~~~~kdG~~~~v~~ 219 (783)
.+.+...|.+|+|+|+|++++.++||+++|++|+++.++++|++.......+...+..|+....+++++++||..+|+..
T Consensus 251 ~~f~~~~~~dg~~~~vn~~~~~ilGY~~eEl~g~~~~~~iHpdD~~~~~~~~~~~l~~g~~~~~eyR~~~kdG~~vWv~~ 330 (361)
T 4f3l_A 251 EEFTSRHSLEWKFLFLDHRAPPIIGYLPFEVLGTSGYDYYHVDDLENLAKCHEHLMQYGKGKSCYYRFLTKGQQWIWLQT 330 (361)
T ss_dssp CEEEEEECTTSBEEEECTTSHHHHCCCHHHHTTSBGGGGBCHHHHHHHHHHHHHHHHHSEEECCCEEEECTTSEEEEEEE
T ss_pred ceeEEEEcCCceEEEECChhhhhhCcCHHHHcCCCHHHeECHHHHHHHHHHHHHHHhCCCcceEEEEEEecCCCEEEEEE
Confidence 34566688999999999999999999999999999999999988766666677888888877778999999999999999
Q ss_pred EEEEEECC-CCCEEEEEEEEEehHHHHHHH
Q 003963 220 TNTPFYDD-DGTLVGIVCVSTDSRPFQETR 248 (783)
Q Consensus 220 ~~~Pi~d~-~G~v~g~v~i~rDITerk~~E 248 (783)
+..|++|. +|++.+++++.+|||+++..+
T Consensus 331 ~~~~v~~~~~g~~~~iv~~~~dITe~~~~~ 360 (361)
T 4f3l_A 331 HYYITYHQWNSRPEFIVCTHTVVSYAEVRA 360 (361)
T ss_dssp EEEEEECTTTCCEEEEEEEEEECCHHHHHH
T ss_pred EEEEEEcCCCCCeeEEEEEEEECChhHhhc
Confidence 99999998 799999999999999998764
No 307
>1ll8_A PAS kinase; PAS domain, ligand binding, ligand screening, kinase regulation, transferase; NMR {Homo sapiens} SCOP: d.110.3.5
Probab=99.12 E-value=1.6e-11 Score=109.89 Aligned_cols=101 Identities=17% Similarity=0.235 Sum_probs=75.8
Q ss_pred hCcceEEEcCC-CcEEEecHHHHHHcCCChhhHcCCCccccccccccchHHHHHHHH-HHh-CCeE---EEEEEEEcCCC
Q 003963 139 MGQSVHIFDLS-DRIIYWNRSAELLYGYSAEEALGQDAIELLTDGRDFDVAYDIVHR-IKM-GERW---TGQFPAKTKTE 212 (783)
Q Consensus 139 ~~d~I~i~D~~-G~Ii~~N~aae~L~Gys~eEllG~~~~~l~~~~~~~~~~~~l~~~-l~~-g~~~---~~e~~~~~kdG 212 (783)
.+++|+++|.+ |+|+++|++|++|+||+.+|++|+++.+++++... .....+... +.. +... ..++..+++||
T Consensus 7 ~~~~i~~~d~~~g~I~~~N~aa~~l~G~~~~el~g~~~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dG 85 (114)
T 1ll8_A 7 FNKAIFTVDAKTTEILVANDKACGLLGYSSQDLIGQKLTQFFLRSDS-DVVEALSEEHMEADGHAAVVFGTVVDIISRSG 85 (114)
T ss_dssp TTCEEEEEETTTCBEEEECTTHHHHHTCCTTTTTTSBGGGGSSCTTT-HHHHHTTSSTTSSSSCSSCCCSSSEEECCTTC
T ss_pred CCceEEEEECCCCeEEEehHHHHHHhCCCHHHHcCCCHHHhcCcchh-HHHHHHHHHhhccCCcceeccCcEEEEEecCC
Confidence 45799999999 99999999999999999999999999999887543 111222211 111 2211 23466789999
Q ss_pred CEEEEEEEEEEEECCCCCEEEEEEEEEehH
Q 003963 213 ERVLVVATNTPFYDDDGTLVGIVCVSTDSR 242 (783)
Q Consensus 213 ~~~~v~~~~~Pi~d~~G~v~g~v~i~rDIT 242 (783)
+.+|+.++++|+.+.++ .+++++++|++
T Consensus 86 ~~~~v~~~~~~~~~~~~--~~~v~~~~~~~ 113 (114)
T 1ll8_A 86 EKIPVSVWMKRMRQERR--LCCVVVLEPVE 113 (114)
T ss_dssp CCEEEECCEECCBSSSS--BEEEEEEEECC
T ss_pred CEEEEEEEEEeeccCCc--cEEEEEEeecC
Confidence 99999999999987654 35788899875
No 308
>1nwz_A PYP, photoactive yellow protein; PAS, LOV, GAF, domains fold, signaling protein; HET: HC4; 0.82A {Halorhodospira halophila} SCOP: d.110.3.1 PDB: 1kou_A* 1ot9_A* 1otb_A* 1s4r_A* 1s4s_A* 1ts0_A* 1ts6_A* 1ts7_A* 1ts8_A* 1uwn_X* 1uwp_X* 2d01_A* 2phy_A* 2pyp_A* 2pyr_A* 2qj5_A* 2qj7_A* 2qws_A* 2zoh_A* 2zoi_A* ...
Probab=99.09 E-value=9.4e-10 Score=101.06 Aligned_cols=101 Identities=9% Similarity=-0.035 Sum_probs=79.6
Q ss_pred HHHHHHhCcceEEEcCCCcEEEecHHHHHHcCCChhhHcCCCccccc-cccccchHHHHHHHHHHhCCeEEEEEEEEcCC
Q 003963 133 LNILQSMGQSVHIFDLSDRIIYWNRSAELLYGYSAEEALGQDAIELL-TDGRDFDVAYDIVHRIKMGERWTGQFPAKTKT 211 (783)
Q Consensus 133 ~~ile~~~d~I~i~D~~G~Ii~~N~aae~L~Gys~eEllG~~~~~l~-~~~~~~~~~~~l~~~l~~g~~~~~e~~~~~kd 211 (783)
..+++++++||+++|.+|+|++||+++++++||++++++|+++.+.+ +....+.+...+.+.++.|.-........+++
T Consensus 20 ~~~ld~l~~Gii~lD~~g~I~~~N~~~e~~sG~~~~eviGk~~f~~~~~~~~~~~f~~rf~~~~~~g~l~~~~~~v~~~~ 99 (125)
T 1nwz_A 20 DGQLDGLAFGAIQLDGDGNILQYNAAEGDITGRDPKQVIGKNFFKDVAPCTDSPEFYGKFKEGVASGNLNTMFEYTFDYQ 99 (125)
T ss_dssp HHHHTTCSSEEEEEETTCBEEEECHHHHHHHCCCHHHHTTSBCCCCCCGGGCSTTTHHHHHHHHHHTCCEEEEEEEECTT
T ss_pred HHHHhccCceEEEECCCCEEEEEHHHHHHHhCCCHHHHcCCchhhhccchhcccHHHHHHHHHHhcCceeEEEEEEEcCC
Confidence 44799999999999999999999999999999999999999998754 44444666667788888888433334445899
Q ss_pred CCEEEEEEEEEEEECCCCCEEEEE
Q 003963 212 EERVLVVATNTPFYDDDGTLVGIV 235 (783)
Q Consensus 212 G~~~~v~~~~~Pi~d~~G~v~g~v 235 (783)
|..+ .+.+.+..+.+|...+++
T Consensus 100 ~~p~--~v~i~l~~~~~~~~~~i~ 121 (125)
T 1nwz_A 100 MTPT--KVKVHMKKALSGDSYWVF 121 (125)
T ss_dssp SCCE--EEEEEEEECSSSSEEEEE
T ss_pred CCEE--EEEEEEEEcCCCCEEEEE
Confidence 9855 555556777888877664
No 309
>4f3l_B BMAL1B; BHLH, PAS, circadian rhythm proteins, transcription-activato; 2.27A {Mus musculus}
Probab=99.08 E-value=1.9e-10 Score=127.34 Aligned_cols=108 Identities=15% Similarity=0.112 Sum_probs=89.9
Q ss_pred hCcceEEEcCCCcEEEecHHHHHHcCCChhhHcCCCccccccccccchHHHHHHHHHHhCCe-EEEEEEEEcCCCCEEEE
Q 003963 139 MGQSVHIFDLSDRIIYWNRSAELLYGYSAEEALGQDAIELLTDGRDFDVAYDIVHRIKMGER-WTGQFPAKTKTEERVLV 217 (783)
Q Consensus 139 ~~d~I~i~D~~G~Ii~~N~aae~L~Gys~eEllG~~~~~l~~~~~~~~~~~~l~~~l~~g~~-~~~e~~~~~kdG~~~~v 217 (783)
..+-+...|.+|+|+|+|++++.++||+++|++|+++.++++|++.......+...+..+.. ...+++++++||..+|+
T Consensus 277 ~~~fi~~~~~dg~~~~vn~~~~~ilGY~~eEl~g~~~~~~iHpdD~~~~~~~~~~~l~~~~~~~~~eyR~~~kdG~~vWv 356 (387)
T 4f3l_B 277 SMEYVSRHAIDGKFVFVDQRATAILAYLPQELLGTSCYEYFHQDDIGHLAECHRQVLQTREKITTNCYKFKIKDGSFITL 356 (387)
T ss_dssp CCEEEEEECTTSBEEEECTHHHHHHCCCHHHHTTSBGGGTBCHHHHHHHHHHHHHHTTCSSCEECCCEEEECTTSCEEEE
T ss_pred CceEEEEECCCCEEEEECCCcccccCCCHHHHcCCcHHHeeCHHHHHHHHHHHHHHHhcCCCeeeEEEEEEccCCCEEEE
Confidence 34567778999999999999999999999999999999999988865555555566655554 55689999999999999
Q ss_pred EEEEEEEECC-CCCEEEEEEEEEehHHHHH
Q 003963 218 VATNTPFYDD-DGTLVGIVCVSTDSRPFQE 246 (783)
Q Consensus 218 ~~~~~Pi~d~-~G~v~g~v~i~rDITerk~ 246 (783)
.....+++|. +|++.++|++.+|||+||.
T Consensus 357 ~~~~~~~~~~~~g~~~~ivg~~~dIT~Rk~ 386 (387)
T 4f3l_B 357 RSRWFSFMNPWTKEVEYIVSTNTVVLANVL 386 (387)
T ss_dssp EEEEEEEEETTTTEEEEEEEEEEECC----
T ss_pred EEEEEEEECCCCCCEEEEEEEEEEcchhhc
Confidence 9999999987 8899999999999999874
No 310
>3a0s_A Sensor protein; PAS-fold, kinase, phosphoprotein, transferase, two-component regulatory system; HET: PG4 PGE; 1.47A {Thermotoga maritima} PDB: 3a0v_A*
Probab=99.07 E-value=8.4e-10 Score=92.74 Aligned_cols=95 Identities=20% Similarity=0.247 Sum_probs=72.9
Q ss_pred hCcceEEEcCCCcEEEecHHHHHHcCCChhhHcCCCccccccccccchHHHHHHHHHHhCCeEEEEEEEEcCCCCEEEEE
Q 003963 139 MGQSVHIFDLSDRIIYWNRSAELLYGYSAEEALGQDAIELLTDGRDFDVAYDIVHRIKMGERWTGQFPAKTKTEERVLVV 218 (783)
Q Consensus 139 ~~d~I~i~D~~G~Ii~~N~aae~L~Gys~eEllG~~~~~l~~~~~~~~~~~~l~~~l~~g~~~~~e~~~~~kdG~~~~v~ 218 (783)
++++|+++|.+|+|+++|+++++++||+.++++|+++.++ + .. ......+...+..+..+... .. +|..+|+.
T Consensus 1 ~~~~i~~~d~~g~i~~~N~~~~~l~g~~~~~~~g~~~~~~-~-~~-~~~~~~~~~~~~~~~~~~~~--~~--~~~~~~~~ 73 (96)
T 3a0s_A 1 METAIITLSKDGRITEWNKKAEQLFGLKKENVLGRRLKDL-P-DF-EEIGSVAESVFENKEPVFLN--FY--KFGERYFN 73 (96)
T ss_dssp CCCEEEEEETTSBEEEECHHHHHHHCCCHHHHTTSBGGGS-T-TC-HHHHHHHHHHHHHTCCEEEE--EE--EETTEEEE
T ss_pred CCceEEEEcCCCCEeehhHHHHHHhCCCHHHhcCCCHHHC-c-ch-HHHHHHHHHHhccCCeEEEE--EE--cCCcEEEE
Confidence 4789999999999999999999999999999999999888 2 22 22333455666666665322 22 34446899
Q ss_pred EEEEEEECCCCC-EEEEEEEEEe
Q 003963 219 ATNTPFYDDDGT-LVGIVCVSTD 240 (783)
Q Consensus 219 ~~~~Pi~d~~G~-v~g~v~i~rD 240 (783)
+++.|+.+.+|. +.|++++++|
T Consensus 74 ~~~~p~~~~~~~~~~g~v~~~~D 96 (96)
T 3a0s_A 74 IRFSPFRNAKTQLLEGVIITIDD 96 (96)
T ss_dssp EEEEEEECTTTCCEEEEEEEEEC
T ss_pred EEEEEeEcCCCCeeeEEEEEecC
Confidence 999999988665 6799999887
No 311
>1mzu_A PPR; photoactive yellow protein, PAS, PYP, signaling protein; HET: HC4; 2.00A {Rhodospirillum centenum} SCOP: d.110.3.1
Probab=99.07 E-value=1.2e-09 Score=100.50 Aligned_cols=101 Identities=12% Similarity=-0.062 Sum_probs=78.9
Q ss_pred HHHHHHhCcceEEEcCCCcEEEecHHHHHHcCCChhhHcCCCccccc-cccccchHHHHHHHHHHhCCeEEEEEEEEcCC
Q 003963 133 LNILQSMGQSVHIFDLSDRIIYWNRSAELLYGYSAEEALGQDAIELL-TDGRDFDVAYDIVHRIKMGERWTGQFPAKTKT 211 (783)
Q Consensus 133 ~~ile~~~d~I~i~D~~G~Ii~~N~aae~L~Gys~eEllG~~~~~l~-~~~~~~~~~~~l~~~l~~g~~~~~e~~~~~kd 211 (783)
..+++++++||+++|.+|+|++||+++++++||++++++|+++.+.+ +....+.+...+.+.++.|.-........+++
T Consensus 25 ~~~ld~l~~GiivlD~dg~I~~~N~~~e~isG~s~eeviGk~~f~~~~p~~~~~~f~grf~~~~~~G~l~~~~~yv~~~~ 104 (129)
T 1mzu_A 25 TAEFDALPVGAIQVDGSGVIHRYNRTESRLSGRIPERVIGRNFFTEVAPCTNIPAFSGRFMDGVTSGTLDARFDFVFDFQ 104 (129)
T ss_dssp CTTGGGCSSEEEEEETTCBEEEECHHHHHHHCCCHHHHTTSBCCCCCCGGGCSTTTHHHHHHHHHTSCCEEEEEEEEECS
T ss_pred HHHHhccCceEEEECCCCeEEEEHHHHHHHhCCCHHHHcCCchhhhccchhcccHHHHHHHHHHhcCceeEEEEEEEcCC
Confidence 34699999999999999999999999999999999999999998754 44444666667788888777333333444899
Q ss_pred CCEEEEEEEEEEEECCCCCEEEEE
Q 003963 212 EERVLVVATNTPFYDDDGTLVGIV 235 (783)
Q Consensus 212 G~~~~v~~~~~Pi~d~~G~v~g~v 235 (783)
|..+ .+.+.++.+.+|...+++
T Consensus 105 ~~p~--~v~i~l~~~~~~~~~~i~ 126 (129)
T 1mzu_A 105 MAPV--RVQIRMQNAGVPDRYWIF 126 (129)
T ss_dssp SCEE--EEEEEEEECSSTTEEEEE
T ss_pred CCEE--EEEEEEEEcCCCCEEEEE
Confidence 9855 455556677888877664
No 312
>2w0n_A Sensor protein DCUS; signal transduction, two-component regulatory system, PAS, kinase, membrane, transferase, solid state cell inner membrane; NMR {Escherichia coli}
Probab=99.05 E-value=3.3e-11 Score=106.97 Aligned_cols=106 Identities=18% Similarity=0.216 Sum_probs=84.3
Q ss_pred CCCCHHHHHHHHHHhCcceEEEcCCCcEEEecHHHHHHcCC---ChhhHcCCCccccccccccchHHHHHHHHHHhCCeE
Q 003963 125 FNFTDRQYLNILQSMGQSVHIFDLSDRIIYWNRSAELLYGY---SAEEALGQDAIELLTDGRDFDVAYDIVHRIKMGERW 201 (783)
Q Consensus 125 ~~~~~~~~~~ile~~~d~I~i~D~~G~Ii~~N~aae~L~Gy---s~eEllG~~~~~l~~~~~~~~~~~~l~~~l~~g~~~ 201 (783)
+....+.++.++++++++|+++|.+|+|+++|++|++++|| +.++++|+++.+++++.. +...+..+...
T Consensus 10 l~~~~~~~~~il~~~~~~i~~~d~~g~i~~~N~~~~~~~g~~~~~~~~~~g~~~~~~~~~~~-------~~~~~~~~~~~ 82 (118)
T 2w0n_A 10 ISTLFEQRQAMLQSIKEGVVAVDDRGEVTLINDAAQELLNYRKSQDDEKLSTLSHSWSQVVD-------VSEVLRDGTPR 82 (118)
T ss_dssp HCTTHHHHHHHHHCCCCCCEEEBTTTBCCCBCHHHHHHHCSCTTTTTSSCCCTTCCCSCTHH-------HHHHHHTTCCC
T ss_pred HHHHHHHHHHHHhhccccEEEECCCCcEeehhHHHHHHhCCCccChhhhhccCcccccCchh-------HHHHhccCcee
Confidence 34456789999999999999999999999999999999998 889999999998876532 44556666543
Q ss_pred EEEEEEEcCCCCEEEEEEEEEEEECCCCCEEEEEEEEEehH
Q 003963 202 TGQFPAKTKTEERVLVVATNTPFYDDDGTLVGIVCVSTDSR 242 (783)
Q Consensus 202 ~~e~~~~~kdG~~~~v~~~~~Pi~d~~G~v~g~v~i~rDIT 242 (783)
.... ...+| .|+.++..|+.+ +|++.|++++++|||
T Consensus 83 ~~~~--~~~~~--~~~~~~~~p~~~-~g~~~g~v~~~~DiT 118 (118)
T 2w0n_A 83 RDEE--ITIKD--RLLLINTVPVRS-NGVIIGAISTFRDKT 118 (118)
T ss_dssp CCCC--EESSS--CEECCCEECCCC-SSCCCCEEECCCCCC
T ss_pred ccEE--EEECC--EEEEEeeceeee-CCEEEEEEEEEEeCC
Confidence 2211 22355 467788899987 888889999999997
No 313
>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6
Probab=99.04 E-value=2.7e-10 Score=117.79 Aligned_cols=138 Identities=17% Similarity=0.118 Sum_probs=99.2
Q ss_pred ccceeEeeeeccCCcEEEEEEEEeCCceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCc--eeeEeceeecCCceEEE
Q 003963 504 WEDLTIGEQIGQGSCGTVYHAVWYGSQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPN--VLLFMGAVTSPQRLCIV 581 (783)
Q Consensus 504 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~Hpn--Iv~l~~~~~~~~~~~lV 581 (783)
...|.+....+.|..+.||++...+++.+++|+..... ...+.+|+.+++.+.+.+ +++++.++...+..++|
T Consensus 19 ~~~~~~~~~~~gg~~~~v~~~~~~~g~~~vlK~~~~~~-----~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~~~~~~~v 93 (264)
T 1nd4_A 19 LFGYDWAQQTIGCSDAAVFRLSAQGRPVLFVKTDLSGA-----LNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLL 93 (264)
T ss_dssp TTTCEEEECSCTTSSCEEEEEECTTSCCEEEEEECSCT-----TSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEE
T ss_pred cCCCceEecccCCCCceEEEEecCCCCeEEEEeCCccc-----chhhhHHHHHHHHHHhCCCCCCeEEEeccCCCCCEEE
Confidence 34566654445666799999976556679999976542 134677999999886444 56788888888889999
Q ss_pred EEecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCC-------------------------------------
Q 003963 582 TEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCN------------------------------------- 624 (783)
Q Consensus 582 ~E~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~------------------------------------- 624 (783)
|||++|.+|. ... .. ...++.+++..|..||+..
T Consensus 94 ~e~i~G~~l~--~~~----~~---~~~~~~~l~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (264)
T 1nd4_A 94 LGEVPGQDLL--SSH----LA---PAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEHQG 164 (264)
T ss_dssp EECCSSEETT--TSC----CC---HHHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGGGTT
T ss_pred EEecCCcccC--cCc----CC---HhHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhcCCccchhhhhhccC
Confidence 9999998874 211 11 1245566777777777642
Q ss_pred -------------------CCEEecCCCCCCEEEcCCCcEEEEecCCCcc
Q 003963 625 -------------------PPIIHRDLKSSNLLVDKHWTVKVGDFGLSRL 655 (783)
Q Consensus 625 -------------------~~IvHrDIKp~NILl~~~~~vkL~DFGla~~ 655 (783)
..++|+|++|.|||+++++.+.|+||+.+..
T Consensus 165 ~~~~~~~~~l~~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~liD~~~a~~ 214 (264)
T 1nd4_A 165 LAPAELFARLKARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLGV 214 (264)
T ss_dssp CCHHHHHHHHHHTCCSSCCEEEECSSCCGGGEEEETTEEEEECCCTTCEE
T ss_pred ccHHHHHHHHHHhcCCCCCeEEECCCCCCCcEEEECCcEEEEEcchhccc
Confidence 1199999999999998776677999998753
No 314
>2jhe_A Transcription regulator TYRR; aromatic hydrocarbons catabolism, TYRR protei nucleotide-binding, transcription regulation, activator; HET: PG4; 2.30A {Escherichia coli}
Probab=99.02 E-value=1.9e-10 Score=113.22 Aligned_cols=105 Identities=14% Similarity=0.203 Sum_probs=81.9
Q ss_pred HHHHHHHHHHhCcceEEEcCCCcEEEecHHHHHHcCCChhhHcCCCccccccccccchHHHHHHHHHHhCC-e-EEEEEE
Q 003963 129 DRQYLNILQSMGQSVHIFDLSDRIIYWNRSAELLYGYSAEEALGQDAIELLTDGRDFDVAYDIVHRIKMGE-R-WTGQFP 206 (783)
Q Consensus 129 ~~~~~~ile~~~d~I~i~D~~G~Ii~~N~aae~L~Gys~eEllG~~~~~l~~~~~~~~~~~~l~~~l~~g~-~-~~~e~~ 206 (783)
.+.++.+++++++||+++|.+|+|+++|++|++++|++.++++|+++.++++... +...+..+. . ...++.
T Consensus 79 ~~~l~~il~~~~~gvi~~D~~g~I~~~N~aa~~llg~~~~~~~g~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~ 151 (190)
T 2jhe_A 79 HLALSALLEALPEPVLSVDMKSKVDMANPASCQLFGQKLDRLRNHTAAQLINGFN-------FLRWLESEPQDSHNEHVV 151 (190)
T ss_dssp HHHHHHHHHHCSSCEEEECTTCBEEEECHHHHHHHTSCHHHHTTSBGGGTSTTCC-------HHHHHHTCCCSCEEEEEE
T ss_pred HHHHHHHHHhCCCcEEEEcCCCCEEEEcHHHHHHhCCCHHHhcCccHHHHhCCCC-------HHHHHhcCCCCCcceEEE
Confidence 3678999999999999999999999999999999999999999999999876543 233455554 2 333333
Q ss_pred EEcCCCCEEEEEEEEEEEECCCCC----EEEEEEEEEehHHHH
Q 003963 207 AKTKTEERVLVVATNTPFYDDDGT----LVGIVCVSTDSRPFQ 245 (783)
Q Consensus 207 ~~~kdG~~~~v~~~~~Pi~d~~G~----v~g~v~i~rDITerk 245 (783)
. +|. ++.+.+.|+.+.+|+ +.|++.+++|||+++
T Consensus 152 ~---~g~--~~~~~~~pi~~~~~~~~~~~~g~v~~~~DiTe~~ 189 (190)
T 2jhe_A 152 I---NGQ--NFLMEITPVYLQDENDQHVLTGAVVMLRSTIRMG 189 (190)
T ss_dssp E---TTE--EEEEEEEEETTTTEEEEEEEE-HHHHHHHHTTTC
T ss_pred E---CCe--EEEEEEEEEEecCCCCcceEEeEEEEEeccchhc
Confidence 2 664 356778899876665 889999999999864
No 315
>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}
Probab=98.96 E-value=1.2e-09 Score=119.43 Aligned_cols=146 Identities=19% Similarity=0.233 Sum_probs=106.5
Q ss_pred eeEeeeeccCCcEEEEEEEEeCCceEEEEEEe--cccCCHHHHHHHHHHHHHHHhCC--CCceeeEeceeecC---CceE
Q 003963 507 LTIGEQIGQGSCGTVYHAVWYGSQDVAVKVFS--RQEYSDEVIHSFRQEVSLMKRLR--HPNVLLFMGAVTSP---QRLC 579 (783)
Q Consensus 507 y~i~~~LG~G~fG~Vy~a~~~~~~~vAiK~i~--~~~~~~~~~~~~~~Ei~il~~l~--HpnIv~l~~~~~~~---~~~~ 579 (783)
....+.|+.|.++.||++... ++.+++|+.. ..... .....+.+|+.+++.|. +..+++++.++.+. +..|
T Consensus 40 ~~~~~~l~~G~sn~~y~v~~~-~~~~vlr~~~~p~~~~~-~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~~g~~~ 117 (359)
T 3dxp_A 40 PLSVEQFKGGQSNPTFKLVTP-GQTYVMRAKPGPKSKLL-PSAHAIEREYRVMDALAGTDVPVAKMYALCEDESVIGRAF 117 (359)
T ss_dssp CCEEEECCC-CCSCEEEEECS-SCEEEEECCCC-----------CHHHHHHHHHHHTTSSSCCCCEEEEECCTTTTSSCE
T ss_pred CceEEEcCCcccceEEEEEEC-CceEEEEeCCCCCCCCC-CcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCCccCCeE
Confidence 334678999999999998764 4689999865 32211 12346778999999997 45578888888766 4589
Q ss_pred EEEEecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhC------------------------------------
Q 003963 580 IVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHC------------------------------------ 623 (783)
Q Consensus 580 lV~E~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~------------------------------------ 623 (783)
+||||++|..+.+.. ...++......++.+++..|..||..
T Consensus 118 ~vme~v~G~~l~~~~---~~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (359)
T 3dxp_A 118 YIMEFVSGRVLWDQS---LPGMSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYGKPGNYFQRQIERWTKQYKLSETESI 194 (359)
T ss_dssp EEEECCCCBCCCCTT---CTTCCHHHHHHHHHHHHHHHHHHHHSCTTTTTCTTSSCCSCHHHHHHHHHHHHHHHHCCSCC
T ss_pred EEEEecCCeecCCCc---cccCCHHHHHHHHHHHHHHHHHHhCCCchhccccccCCCCCchHHHHHHHHHHHHhcCCcCC
Confidence 999999987774321 12356777788889999999999973
Q ss_pred --------------------CCCEEecCCCCCCEEEcCCCc--EEEEecCCCcccc
Q 003963 624 --------------------NPPIIHRDLKSSNLLVDKHWT--VKVGDFGLSRLKH 657 (783)
Q Consensus 624 --------------------~~~IvHrDIKp~NILl~~~~~--vkL~DFGla~~~~ 657 (783)
...++|+|++|.|||++.++. +.|+||+.+....
T Consensus 195 ~~~~~~~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~~~v~~viDwe~a~~g~ 250 (359)
T 3dxp_A 195 PAMDSLMDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTEPRVLAVLDWELSTLGH 250 (359)
T ss_dssp HHHHHHHHHGGGCCCSTTSSCCEEECSSCSGGGEEECSSSSCEEEECCCTTCEEEC
T ss_pred hHHHHHHHHHHhcCCCccCCCceEEeCCCCCCcEEEeCCCCcEEEEECccccccCC
Confidence 134999999999999987653 6999999987543
No 316
>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A
Probab=98.87 E-value=2.7e-09 Score=113.80 Aligned_cols=185 Identities=21% Similarity=0.208 Sum_probs=120.7
Q ss_pred eeeeccCCcEEEEEEEEeCCceEEEEEEecccCCHHHHHHHHHHHHHHHhCC-CCc--eeeEeceeecCC---ceEEEEE
Q 003963 510 GEQIGQGSCGTVYHAVWYGSQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLR-HPN--VLLFMGAVTSPQ---RLCIVTE 583 (783)
Q Consensus 510 ~~~LG~G~fG~Vy~a~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~-Hpn--Iv~l~~~~~~~~---~~~lV~E 583 (783)
++.++.|.+..||++. ..+++|+.... .....+.+|+.+|+.+. +.. +.+++....... ..|+||+
T Consensus 25 i~~~~~G~~n~v~~v~----~~~vlR~~~~~----~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~~~~~~~~~vm~ 96 (304)
T 3sg8_A 25 IEISGEGNDCIAYEIN----RDFIFKFPKHS----RGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPSETYQMSFAGFT 96 (304)
T ss_dssp CCEEEECSSEEEEEST----TSEEEEEESSH----HHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCCCSSCSCSCEEEE
T ss_pred eEecCCCCcceEEEEC----CEEEEEecCCc----chHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCCCCCcceEEEc
Confidence 3568999999999873 57999985432 34567889999998884 322 445555443333 3589999
Q ss_pred ecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCC---------------------------------------
Q 003963 584 FLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCN--------------------------------------- 624 (783)
Q Consensus 584 ~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~--------------------------------------- 624 (783)
+++|..|...... .++......++.+++..|..||+..
T Consensus 97 ~i~G~~l~~~~~~---~l~~~~~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 173 (304)
T 3sg8_A 97 KIKGVPLTPLLLN---NLPKQSQNQAAKDLARFLSELHSINISGFKSNLVLDFREKINEDNKKIKKLLSRELKGPQMKKV 173 (304)
T ss_dssp CCCCEECCHHHHH---TSCHHHHHHHHHHHHHHHHHHHHSCCTTSCGGGBCCHHHHHHHHHHHHHHHHTTTSCHHHHHHH
T ss_pred ccCCeECCccccc---cCCHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhHHHHHHHHHHHHHHHhcccCCcccHHHH
Confidence 9999887653321 2556666677777777777777511
Q ss_pred -----------------CCEEecCCCCCCEEEcC--CCcEEEEecCCCcccccccccccCCCCCCcccCccccc------
Q 003963 625 -----------------PPIIHRDLKSSNLLVDK--HWTVKVGDFGLSRLKHETYLTTKTGKGTPQWMAPEVLR------ 679 (783)
Q Consensus 625 -----------------~~IvHrDIKp~NILl~~--~~~vkL~DFGla~~~~~~~~~~~~~~Gt~~Y~aPE~~~------ 679 (783)
..++|+|++|.|||++. ...+.|+||+.+................ .-..|+...
T Consensus 174 ~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~iD~~~~~~~~~~~Dl~~~~~~~-~~~~~~~~~~~l~~Y 252 (304)
T 3sg8_A 174 DDFYRDILENEIYFKYYPCLIHNDFSSDHILFDTEKNTICGIIDFGDAAISDPDNDFISLMEDD-EEYGMEFVSKILNHY 252 (304)
T ss_dssp HHHHHHHHTCGGGTCCCCEEECSCCCGGGEEEETTTTEEEEECCCTTCEEECTTHHHHTTCCTT-TSCCHHHHHHHHHHH
T ss_pred HHHHHHHHhccccccCCceeEeCCCCcccEEEeCCCCCEEEEEeCCCCccCChHHHHHHHHhhc-cccCHHHHHHHHHHc
Confidence 23899999999999998 5568899999987543322111110000 002232211
Q ss_pred CCCC--------CchhHHHHHHHHHHHHHcCCCCC
Q 003963 680 NEPS--------DEKSDVYSFGVILWELATEKIPW 706 (783)
Q Consensus 680 ~~~~--------s~~sDIwSLG~il~elltG~~Pf 706 (783)
+... ....+.|+++.++|.+.+|..+|
T Consensus 253 ~~~~~~~~~~r~~~~~~~~~l~~~~~~~~~g~~~~ 287 (304)
T 3sg8_A 253 KHKDIPTVLEKYRMKEKYWSFEKIIYGKEYGYMDW 287 (304)
T ss_dssp TCSCHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHH
T ss_pred CCCCcHHHHHHHHHHHHHHHHHHHHHHHHcCCHHH
Confidence 1100 12368999999999999998776
No 317
>3rty_A Period circadian protein; PAS domain, signalling, timeless, circadian clock protein; 2.85A {Drosophila melanogaster} PDB: 1wa9_A 3gec_A
Probab=98.71 E-value=4.6e-08 Score=105.92 Aligned_cols=105 Identities=12% Similarity=0.033 Sum_probs=88.8
Q ss_pred CcceEEEcCCCcEEEecHHHHHHcCCChhhHcCCCccccccccccchHHHHHHHHHHhCCe-----EEEEEEEEcCCCCE
Q 003963 140 GQSVHIFDLSDRIIYWNRSAELLYGYSAEEALGQDAIELLTDGRDFDVAYDIVHRIKMGER-----WTGQFPAKTKTEER 214 (783)
Q Consensus 140 ~d~I~i~D~~G~Ii~~N~aae~L~Gys~eEllG~~~~~l~~~~~~~~~~~~l~~~l~~g~~-----~~~e~~~~~kdG~~ 214 (783)
.+.|+..|.+|+|+|+|+++..++||+++|++|+++.++++|++.......+...++.|+. ...+++++++||..
T Consensus 154 ~~fi~r~~~dG~~~yvn~~~~~lLGY~peELiG~s~~~~vHPdD~~~~~~~~~~~l~~G~~~~~~~~s~~yR~~~kdG~~ 233 (339)
T 3rty_A 154 PKFAIRHTATGIISHVDSAAVSALGYLPQDLIGRSIMDFYHHEDLSVMKETYETVMKKGQTAGASFCSKPYRFLIQNGCY 233 (339)
T ss_dssp CEEEEEEETTCBEEEECTTHHHHHCCCHHHHTTSBGGGGBCGGGHHHHHHHHHHHHHHTTSTTCCCBCCCEEEECTTSCE
T ss_pred ceEEEEECCCCeEEEcChhhhcccCCCHHHHcCCcHHHEECHHHHHHHHHHHHHHHHcCCcccccccceEEEEEccCCCE
Confidence 4567779999999999999999999999999999999999999876655566777777774 35678999999999
Q ss_pred EEEEEEEEEEECCC-CCEEEEEEEEEehHHH
Q 003963 215 VLVVATNTPFYDDD-GTLVGIVCVSTDSRPF 244 (783)
Q Consensus 215 ~~v~~~~~Pi~d~~-G~v~g~v~i~rDITer 244 (783)
+|+..+..+++|.. +++.++|++-+.|+..
T Consensus 234 vWlet~~~~~~np~s~~~~~II~~h~vi~~p 264 (339)
T 3rty_A 234 VLLETEWTSFVNPWSRKLEFVVGHHRVFQGP 264 (339)
T ss_dssp EEEEEEEEEEECTTTCSEEEEEEEEEEEECC
T ss_pred EEEEEEEEEEECCCCCCeeEEEEEEEECCCC
Confidence 99999999999875 5677788877766544
No 318
>3r70_A Aminoglycoside phosphotransferase; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE ADP PE3; 1.80A {Escherichia coli} PDB: 3r6z_A* 3uzr_A* 4dca_A* 3hav_A* 3ham_A*
Probab=98.69 E-value=1.5e-07 Score=101.12 Aligned_cols=182 Identities=15% Similarity=0.122 Sum_probs=116.7
Q ss_pred ceeEeeeeccCCcEEEEEEEEeCCceEEEEEEecccCCHHHHHHHHHHHHHHHhCCC----CceeeEeceeecCCceEEE
Q 003963 506 DLTIGEQIGQGSCGTVYHAVWYGSQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRH----PNVLLFMGAVTSPQRLCIV 581 (783)
Q Consensus 506 ~y~i~~~LG~G~fG~Vy~a~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~H----pnIv~l~~~~~~~~~~~lV 581 (783)
.+...+.++.|....||++ ++.+++|+... ......+.+|..+|+.|.+ ..+++++++ +..++|
T Consensus 38 ~i~~v~~l~~G~~n~vy~v----g~~~vlR~~~~----~~~~~~~~~E~~~L~~L~~~~~~~~vP~v~~~----~~~~lv 105 (320)
T 3r70_A 38 KINELRYLSSGDDSDTFLC----NEQYVVKVPKR----DSVRISQKRELELYRFLENCKLSYQIPAVVYQ----SDRFNI 105 (320)
T ss_dssp CCSCEEEEEECSSEEEEEE----TTTEEEEEESS----HHHHHHHHHHHHHHHHHTTSCCSSBCCCEEEE----CSSCEE
T ss_pred ceEEEEeCCCCCCceEEEE----CCEEEEEeCCc----HHHHHHHHHHHHHHHHHHhcCCCCCcceEEec----CCcEEE
Confidence 3445678999999999998 56799997633 2334568899999998865 224455544 567899
Q ss_pred EEecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCC------------------------------------
Q 003963 582 TEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNP------------------------------------ 625 (783)
Q Consensus 582 ~E~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~------------------------------------ 625 (783)
|||++|.+|..... ..++......++.+++..|..||+...
T Consensus 106 me~i~G~~l~~~~~---~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (320)
T 3r70_A 106 MKYIKGERITYEQY---HKLSEKEKDALAYDEATFLKELHSIEIDCSVSLFSDALVNKKDKFLQDKKLLISILEKEQLLT 182 (320)
T ss_dssp EECCCCBCCCHHHH---TTSCHHHHHHHHHHHHHHHHHHHHSCCCTTSHHHHTTBCCHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred EeecCCcccccccc---ccCCHHHHHHHHHHHHHHHHHHhCCCcccCCCccccccccchHHHHHHHHHHHHHHhhccccc
Confidence 99999988864321 124555556666777777777774331
Q ss_pred -------------------------CEEecCCCCCCEEEcCCCcEEEEecCCCcccccccccccCCCCCCcccCccccc-
Q 003963 626 -------------------------PIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETYLTTKTGKGTPQWMAPEVLR- 679 (783)
Q Consensus 626 -------------------------~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~~Gt~~Y~aPE~~~- 679 (783)
.++|+|++|.|||++.+..+.|+||+.+.....................|+...
T Consensus 183 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~H~D~~~~N~l~~~~~~~~~iD~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 262 (320)
T 3r70_A 183 DEMLEHIETIYENILSNAVLFKYTPCLVHNDFSANNMIFRNNRLFGVIDFGDFNVGDPDNDFLCLLDCSTDDFGKEFGRK 262 (320)
T ss_dssp HHHHHHHHHHHHHHHTCGGGTCCCCEEECSCCSGGGEEEETTEEEEECCCTTCEEECGGGGGHHHHSCCTTSCCHHHHHH
T ss_pred ccchHHHHHHHHHHHhccccccCCceeeECCCCCCcEEEECCceEEEECCcccccCCHHHHHHHHHHhcccccCHHHHHH
Confidence 259999999999999876679999999875443322211111111123333321
Q ss_pred ---CCC------CCchhHHHHHHHHHHHHHcC
Q 003963 680 ---NEP------SDEKSDVYSFGVILWELATE 702 (783)
Q Consensus 680 ---~~~------~s~~sDIwSLG~il~elltG 702 (783)
... .....+.|..-..+++++.|
T Consensus 263 ~l~~Y~~~~~~~~~~~~~~~~~~~~l~~l~~~ 294 (320)
T 3r70_A 263 VLKYYQHKAPEVAERKAELNDVYWSIDQIIYG 294 (320)
T ss_dssp HHHHTTCSCHHHHHHHHHHHHHTHHHHHHHSS
T ss_pred HHHHHhccCcHHHHHHHHHHHHHhHHHHHHHH
Confidence 111 12356777555557777777
No 319
>2ykf_A Pdtas, probable sensor histidine kinase pdtas; transferase, two-component system, GAF domain, PAS domain; 2.00A {Mycobacterium tuberculosis} PDB: 2ykh_A
Probab=98.07 E-value=3.4e-09 Score=113.39 Aligned_cols=112 Identities=16% Similarity=0.132 Sum_probs=80.6
Q ss_pred HHHHhCcceEEEcCCCcEEEecHHHHHHcC---CChhhHcCCCcccccccc---cc-c-hHHHHHHHHHHh-CCeEEEEE
Q 003963 135 ILQSMGQSVHIFDLSDRIIYWNRSAELLYG---YSAEEALGQDAIELLTDG---RD-F-DVAYDIVHRIKM-GERWTGQF 205 (783)
Q Consensus 135 ile~~~d~I~i~D~~G~Ii~~N~aae~L~G---ys~eEllG~~~~~l~~~~---~~-~-~~~~~l~~~l~~-g~~~~~e~ 205 (783)
+++.+++||+++|.+|+|+|+|++|++++| +. ++++|+++.+++... .. . .....+..++.. +.....++
T Consensus 175 ~~~~~~dGIivvD~~G~Ii~~N~aA~~ll~~lG~~-~~~iGk~l~el~~~~~~~~~~~~~~~~~l~~vl~~~~~~~~~ei 253 (305)
T 2ykf_A 175 SSPRAGDGFIRLDVDGVVSYASPNALSAYHRMGLT-TELEGVNLIDATRPLISDPFEAHEVDEHVQDLLAGDGKGMRMEV 253 (305)
Confidence 456899999999999999999999999985 54 789999999988654 11 0 111112223433 33332222
Q ss_pred EEEcCCCCEEEEEEEEEEEECCCCCEEEEEEEEEehHHHHHHHHHHHH
Q 003963 206 PAKTKTEERVLVVATNTPFYDDDGTLVGIVCVSTDSRPFQETRAALWD 253 (783)
Q Consensus 206 ~~~~kdG~~~~v~~~~~Pi~d~~G~v~g~v~i~rDITerk~~E~~L~~ 253 (783)
. .+| .++.++..|+++ +|++.|++.+++|||+++++|++|+.
T Consensus 254 ~---~~~--~~l~v~~~Pi~~-~g~~~G~Vvv~rDITE~~~lE~eL~~ 295 (305)
T 2ykf_A 254 D---AGG--ATVLLRTLPLVV-AGRNVGAAILIRDVTEVKRRDRALIS 295 (305)
Confidence 1 122 466788899986 68889999999999999999999854
No 320
>4dj3_A Period circadian protein homolog 3; PAS domain, circadian rhythm, protein binding; 2.50A {Mus musculus}
Probab=98.48 E-value=5.7e-07 Score=96.39 Aligned_cols=102 Identities=12% Similarity=0.041 Sum_probs=83.4
Q ss_pred cceEEEcCCCcEEEecHHHHHHcCCChhhHcCCCccccccccccchHHHHHHHHHHhCCe---EEEEEEEEcCCCCEEEE
Q 003963 141 QSVHIFDLSDRIIYWNRSAELLYGYSAEEALGQDAIELLTDGRDFDVAYDIVHRIKMGER---WTGQFPAKTKTEERVLV 217 (783)
Q Consensus 141 d~I~i~D~~G~Ii~~N~aae~L~Gys~eEllG~~~~~l~~~~~~~~~~~~l~~~l~~g~~---~~~e~~~~~kdG~~~~v 217 (783)
+-+...|.+|+|+|+|+++..++||.++|++|+++.+++++++.......+.+.++.+.. ...+++++++||..+|+
T Consensus 175 ~Fitrh~~dG~~~yvs~~~~~lLGY~peELig~s~~~~vHPdD~~~~~~~~~~~l~~~~~~~f~s~~yR~~~kdG~~vwv 254 (317)
T 4dj3_A 175 IFTTTHTPGCVFLEVDERAVPLLGYLPQDLIGTSILTYLHPEDRPLMVAIHQKVLKYAGHPPFEHSPVRFCTQNGEYVIL 254 (317)
T ss_dssp EEEEEECTTSBEEEECTTHHHHHSCCHHHHTTSBGGGGBCTTTTTHHHHHHHHHHHTTTSCCEECCCEEEECTTSCEEEE
T ss_pred ceEEEecCCCeEEEEChHHhhhcCcChHHHcCCCHHHeECHHHHHHHHHHHHHHHHcCCCccccceEEEEEccCCCEEEE
Confidence 334557889999999999999999999999999999999999876665566677776554 35688999999999999
Q ss_pred EEEEEEEECC-CCCEEEEEEEEEehH
Q 003963 218 VATNTPFYDD-DGTLVGIVCVSTDSR 242 (783)
Q Consensus 218 ~~~~~Pi~d~-~G~v~g~v~i~rDIT 242 (783)
+....+++|. .+++.++|+.-+-|+
T Consensus 255 et~~~~~~np~s~~~e~II~~h~v~~ 280 (317)
T 4dj3_A 255 DSSWSSFVNPWSRKVSFIIGRHKVRT 280 (317)
T ss_dssp EEEEEEEECSSSCCEEEEEEEEEECC
T ss_pred EEEEEEEECCCCCcccEEEEEEEecc
Confidence 9999999986 456666776666443
No 321
>3gdi_A Period circadian protein homolog 2; tandem PAS domains, biological rhythms, cytoplasm, nucleus, phosphoprotein, transcription; 2.40A {Mus musculus}
Probab=98.46 E-value=8.9e-07 Score=94.58 Aligned_cols=102 Identities=10% Similarity=0.041 Sum_probs=84.4
Q ss_pred ceEEEcCCCcEEEecHHHHHHcCCChhhHcCCCccccccccccchHHHHHHHHHHhCCe-EE-EEEEEEcCCCCEEEEEE
Q 003963 142 SVHIFDLSDRIIYWNRSAELLYGYSAEEALGQDAIELLTDGRDFDVAYDIVHRIKMGER-WT-GQFPAKTKTEERVLVVA 219 (783)
Q Consensus 142 ~I~i~D~~G~Ii~~N~aae~L~Gys~eEllG~~~~~l~~~~~~~~~~~~l~~~l~~g~~-~~-~e~~~~~kdG~~~~v~~ 219 (783)
-+...+.+|+|+|+|+++..++||.++|++|+.+.+++++++.......+.+.++.+.. .. ..++++++||..+|++.
T Consensus 167 Fitrh~~dG~~~yvd~~~~~lLGY~peELig~s~~~~iHpdD~~~~~~~~~~~l~~~g~~~~~~~yR~~~kdG~~vwvet 246 (309)
T 3gdi_A 167 FTTTHTPNCLFQAVDERAVPLLGYLPQDLIETPVLVQLHPSDRPLMLAIHKKILQAGGQPFDYSPIRFRTRNGEYITLDT 246 (309)
T ss_dssp EEEEECTTCBEEEECTTHHHHHSCCHHHHTTSBHHHHBCTTSHHHHHHHHHHHHHTTTCCEEEEEEEEECTTSCEEEEEE
T ss_pred EEEEecCCCeEEEECcccccccCcCHHHHcCCCHHHhCCHHHHHHHHHHHHHHHhcCCceeeceEEEEEccCCCEEEEEE
Confidence 45558889999999999999999999999999999999998865554555666775543 55 58999999999999999
Q ss_pred EEEEEECC-CCCEEEEEEEEEehHH
Q 003963 220 TNTPFYDD-DGTLVGIVCVSTDSRP 243 (783)
Q Consensus 220 ~~~Pi~d~-~G~v~g~v~i~rDITe 243 (783)
...++.+. .+++.++|+.-+-|+.
T Consensus 247 ~~~~~~np~s~~~e~ii~~h~v~~g 271 (309)
T 3gdi_A 247 SWSSFINPWSRKISFIIGRHKVRVG 271 (309)
T ss_dssp EEEEEECTTTCCEEEEEEEEEEEEC
T ss_pred EEEEEECCCCCcccEEEEEEEEccC
Confidence 99999876 5778888888777654
No 322
>4dj2_A Period circadian protein homolog 1; PAS domains, circadian clock protein, protein binding; 2.75A {Mus musculus}
Probab=98.41 E-value=7.3e-07 Score=95.65 Aligned_cols=104 Identities=12% Similarity=0.041 Sum_probs=84.0
Q ss_pred CcceEEEcCCCcEEEecHHHHHHcCCChhhHcCCCccccccccccchHHHHHHHHHHh-CCeE-EEEEEEEcCCCCEEEE
Q 003963 140 GQSVHIFDLSDRIIYWNRSAELLYGYSAEEALGQDAIELLTDGRDFDVAYDIVHRIKM-GERW-TGQFPAKTKTEERVLV 217 (783)
Q Consensus 140 ~d~I~i~D~~G~Ii~~N~aae~L~Gys~eEllG~~~~~l~~~~~~~~~~~~l~~~l~~-g~~~-~~e~~~~~kdG~~~~v 217 (783)
.+-+...|.+|+|+|+|+++..++||.++|++|+.+.+++++++.......+.+.++. |... ..+++++++||..+|+
T Consensus 176 ~~Fitrh~~dG~~~yvd~~~~~lLGY~peELig~s~~~~vHPdD~~~~~~~~~~~l~~~g~~~~~~~yR~~~kdG~~vwv 255 (320)
T 4dj2_A 176 RIFTTRHTPSCLFQDVDERAAPLLGYLPQDLLGAPVLLFLHPEDRPLMLAIHKKILQLAGQPFDHSPIRFCARNGEYVTM 255 (320)
T ss_dssp CEEEEEECTTCBEEEECTTHHHHHSCCHHHHTTSBGGGGBCGGGHHHHHHHHHHHTTSSSCCEECCCEEEECSSSCEEEE
T ss_pred ceEEEEecCCceEEEcCcceeccCCcChHHHcCCcHHHhCCHHHHHHHHHHHHHHHhcCCCcccceEEEEEccCCCEEEE
Confidence 3445558899999999999999999999999999999999998865544445556664 4445 3588999999999999
Q ss_pred EEEEEEEECC-CCCEEEEEEEEEehHH
Q 003963 218 VATNTPFYDD-DGTLVGIVCVSTDSRP 243 (783)
Q Consensus 218 ~~~~~Pi~d~-~G~v~g~v~i~rDITe 243 (783)
+....++.+. .+++.++|+.-+-|+.
T Consensus 256 et~~~~~~np~s~~~e~II~~h~v~~g 282 (320)
T 4dj2_A 256 DTSWAGFVHPWSRKVAFVLGRHKVRTA 282 (320)
T ss_dssp ECEEEEEECTTTCSEEEEEEEEEESSC
T ss_pred EEEEEEEECCCCCCccEEEEEEEEccC
Confidence 9999999876 5778888887776654
No 323
>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*
Probab=98.37 E-value=3e-06 Score=90.38 Aligned_cols=136 Identities=18% Similarity=0.147 Sum_probs=90.5
Q ss_pred eeeeccCCcEEEEEEEEeCCceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCC---ceeeEeceee-cCCceEEEEEec
Q 003963 510 GEQIGQGSCGTVYHAVWYGSQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHP---NVLLFMGAVT-SPQRLCIVTEFL 585 (783)
Q Consensus 510 ~~~LG~G~fG~Vy~a~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~Hp---nIv~l~~~~~-~~~~~~lV~E~~ 585 (783)
++.++.|....||++ ++.+++|+-. .......+.+|+.+|+.|.+. .|.+++.++. ..+..|+||||+
T Consensus 24 v~~l~~G~~n~v~~v----g~~~VlR~~~----~~~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~~~g~~~~v~e~i 95 (306)
T 3tdw_A 24 VESLGEGFRNYAILV----NGDWVFRFPK----SQQGADELNKEIQLLPLLVGCVKVNIPQYVYIGKRSDGNPFVGYRKV 95 (306)
T ss_dssp EEEEEECSSEEEEEE----TTTEEEEEES----SHHHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEECTTSCEEEEEECC
T ss_pred eeecCCCcceeEEEE----CCEEEEEecC----CchHHHHHHHHHHHHHHHHhcCCCCCCCeEeecccCCCceEEEEecc
Confidence 456788999999988 5689999842 234456788999999999742 3556666663 456688999999
Q ss_pred CCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhC------------------------------------------
Q 003963 586 PRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHC------------------------------------------ 623 (783)
Q Consensus 586 ~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~------------------------------------------ 623 (783)
+|..|....-. .++......++.++...|..||+.
T Consensus 96 ~G~~l~~~~~~---~l~~~~~~~~~~~lg~~La~LH~~~~~~~~~~g~p~~~w~~~~~~~~~~~~~~~~~~l~~~~~~~l 172 (306)
T 3tdw_A 96 QGQILGEDGMA---VLPDDAKDRLALQLAEFMNELSAFPVETAISAGVPVTNLKNKILLLSEAVEDQVFPLLDESLRDYL 172 (306)
T ss_dssp CSEECHHHHHT---TSCHHHHHHHHHHHHHHHHHHHHSCHHHHHHTTCCBCCHHHHHHHHHHHHHHHTGGGSCHHHHHHH
T ss_pred CCeECchhhhh---hCCHHHHHHHHHHHHHHHHHHhcCCcccccccCCChHHHHHHHHHHHHHHHHhcccccchhhHHHH
Confidence 99877653211 122222333333333333333321
Q ss_pred ----------------CCCEEecCCCCCCEEEcC---CCc-EEEEecCCCccc
Q 003963 624 ----------------NPPIIHRDLKSSNLLVDK---HWT-VKVGDFGLSRLK 656 (783)
Q Consensus 624 ----------------~~~IvHrDIKp~NILl~~---~~~-vkL~DFGla~~~ 656 (783)
...++|+|++|.|||++. ++. +.|+||+.+...
T Consensus 173 ~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~~~iD~~~a~~g 225 (306)
T 3tdw_A 173 TLRFQSYMTHPVYTRYTPRLIHGDLSPDHFLTNLNSRQTPLTGIIDFGDAAIS 225 (306)
T ss_dssp HHHHHHHHHCHHHHCCCCEEECSCCSGGGEEECTTCSSCCEEEECCCTTCEEE
T ss_pred HHHHHHHHhCcccccCCCeeEeCCCCcccEEEecCCCCCceEEEEehhhcCCC
Confidence 123799999999999987 455 489999987643
No 324
>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*
Probab=98.28 E-value=4.1e-06 Score=87.03 Aligned_cols=133 Identities=17% Similarity=0.205 Sum_probs=93.4
Q ss_pred eccCCcE-EEEEEEEeC-CceEEEEEEecccCCHHHHHHHHHHHHHHHhCC-CCceeeEeceeecCCceEEEEEecCCCC
Q 003963 513 IGQGSCG-TVYHAVWYG-SQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLR-HPNVLLFMGAVTSPQRLCIVTEFLPRGS 589 (783)
Q Consensus 513 LG~G~fG-~Vy~a~~~~-~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~-HpnIv~l~~~~~~~~~~~lV~E~~~ggs 589 (783)
+..|..+ .||+..... +..+++|+-... ....+.+|..+|+.|. +--|.+++.++.+++..|+|||+++|.+
T Consensus 32 ~~~G~S~~~v~rl~~~~~~~~~~lk~~~~~-----~~~~~~~E~~~l~~l~~~vPVP~v~~~~~~~~~~~lvme~l~G~~ 106 (272)
T 4gkh_A 32 DNVGQSGATIYRLYGKPNAPELFLKHGKGS-----VANDVTDEMVRLNWLTAFMPLPTIKHFIRTPDDAWLLTTAIPGKT 106 (272)
T ss_dssp EECSSSSCEEEEEECCTTCCCEEEEEEETH-----HHHHHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCCSEE
T ss_pred ccCCCcCCeEEEEEecCCCeEEEEEECCCC-----CHhHHHHHHHHHHHhccCCCcCeEEEEEEECCeEEEEEEeeCCcc
Confidence 3445444 689877654 457999986533 2456788999999885 3236788888888899999999999988
Q ss_pred HHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCC---------------------------------------------
Q 003963 590 LFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCN--------------------------------------------- 624 (783)
Q Consensus 590 L~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~--------------------------------------------- 624 (783)
+.+...... .....++.++...|..||...
T Consensus 107 ~~~~~~~~~-----~~~~~~~~~l~~~L~~Lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (272)
T 4gkh_A 107 AFQVLEEYP-----DSGENIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSRMNNGLVDASDFDDERNGWPVEQVWK 181 (272)
T ss_dssp HHHHHHHCG-----GGHHHHHHHHHHHHHHHHTSCGGGCCBBCCHHHHHHHHHHHHHTTCCCGGGCCGGGTTCCHHHHHH
T ss_pred ccccccCCH-----HHHHHHHHHHHHHHHHhcCCCcccCCcCcccccchhhHHHHHHHhhhhhhhccccccchHHHHHHH
Confidence 877654321 112234455666666666421
Q ss_pred -----------CCEEecCCCCCCEEEcCCCcEEEEecCCCcc
Q 003963 625 -----------PPIIHRDLKSSNLLVDKHWTVKVGDFGLSRL 655 (783)
Q Consensus 625 -----------~~IvHrDIKp~NILl~~~~~vkL~DFGla~~ 655 (783)
..++|+|+.+.|||++.++.+-|+||+.+..
T Consensus 182 ~l~~~~~~~~~~~l~HGDl~~~Nil~~~~~~~~viDwe~a~~ 223 (272)
T 4gkh_A 182 EMHKLLPFSPDSVVTHGDFSLDNLIFDEGKLIGCIDVGRVGI 223 (272)
T ss_dssp HHHTTCCCCCCEEEECSCCCTTSEEEETTEEEEECCCTTCEE
T ss_pred HHHhcccccCCcEEEcCCCCCCeEEEECCeEEEEEECccccc
Confidence 0179999999999999887778999998753
No 325
>3ovc_A Hygromycin-B 4-O-kinase; aminoglycoside phosphotransferase, structural genomics, PSI- protein structure initiative; HET: HY0 PE4; 1.95A {Escherichia coli} PDB: 3tyk_A*
Probab=98.22 E-value=4.2e-06 Score=91.59 Aligned_cols=77 Identities=9% Similarity=0.081 Sum_probs=57.3
Q ss_pred ceeEeeeeccCCcEEEEEEEEeCCceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCc--eeeEeceeecC-CceEEEE
Q 003963 506 DLTIGEQIGQGSCGTVYHAVWYGSQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPN--VLLFMGAVTSP-QRLCIVT 582 (783)
Q Consensus 506 ~y~i~~~LG~G~fG~Vy~a~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~Hpn--Iv~l~~~~~~~-~~~~lV~ 582 (783)
.....+.|+.|....||++.. +++.+++|+.... ..+.+|+.+++.|.... +.+++.++... +..|+||
T Consensus 42 ~~~~i~~l~gG~~n~~y~v~~-~g~~~vlK~~~~~-------~~~~~E~~~l~~L~~~gvpvP~vl~~~~~~~g~~~lv~ 113 (362)
T 3ovc_A 42 SVSDLMQLSEGEESRAFSFDV-GGRGYVLRVNSCA-------DGFYKDRYVYRHFASAALPIPEVLDIGEFSESLTYCIS 113 (362)
T ss_dssp CCEEEEEEEECSSEEEEEEEE-TTEEEEEEEESCC-------HHHHHHHHHHHHHCCSSSCCCCEEEEEESSSSCEEEEE
T ss_pred CCceEEECCCCCcceEEEEEE-CCcEEEEEeCCch-------hhHHHHHHHHHHHHhcCCCCceEEEeccCCCCCeEEEE
Confidence 345567899999999999874 5678999987432 14778999999886433 45677766654 6789999
Q ss_pred EecCCCCH
Q 003963 583 EFLPRGSL 590 (783)
Q Consensus 583 E~~~ggsL 590 (783)
||++|..|
T Consensus 114 e~l~G~~l 121 (362)
T 3ovc_A 114 RRAQGVTL 121 (362)
T ss_dssp ECCCSEET
T ss_pred EecCCCCc
Confidence 99987554
No 326
>3d1u_A Putative fructosamine-3-kinase; YP_290396.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 1.85A {Thermobifida fusca} PDB: 3f7w_A
Probab=98.11 E-value=1.1e-05 Score=85.20 Aligned_cols=79 Identities=14% Similarity=0.114 Sum_probs=59.8
Q ss_pred ceeEeeeeccCCcEEEEEEEEeCCceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCC---ceeeEeceeecCCceEEEE
Q 003963 506 DLTIGEQIGQGSCGTVYHAVWYGSQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHP---NVLLFMGAVTSPQRLCIVT 582 (783)
Q Consensus 506 ~y~i~~~LG~G~fG~Vy~a~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~Hp---nIv~l~~~~~~~~~~~lV~ 582 (783)
.+.-.+.|+.|.++.||++...+++.+++|+....... ....+..|++.|+.|.+. .+++++.+. ..++||
T Consensus 16 ~~~~~~~l~gG~~n~vy~v~~~dG~~~vvK~~~~~~~~--~~~~~~~E~~~L~~L~~~~~v~vP~v~~~~----~~~lvm 89 (288)
T 3d1u_A 16 EVAAVAERGHSHRWHLYRVELADGTPLFVKALPDDAPA--LDGLFRAEALGLDWLGRSFGSPVPQVAGWD----DRTLAM 89 (288)
T ss_dssp CEEEEEEEEEETTEEEEEEEETTSCEEEEEECCTTCCC--CTTHHHHHHHHHHHHTCSTTCCSCCEEEEE----TTEEEE
T ss_pred CccceeeeCCcchhheEEEEeCCCCeEEEEecCCCCcc--hhHHHHHHHHHHHHHHhcCCCCcCeEEEec----CcEEEE
Confidence 34456789999999999998877788999996543211 124578899999999764 577777763 369999
Q ss_pred EecCCCCH
Q 003963 583 EFLPRGSL 590 (783)
Q Consensus 583 E~~~ggsL 590 (783)
||++|+.+
T Consensus 90 e~l~g~~~ 97 (288)
T 3d1u_A 90 EWVDERPP 97 (288)
T ss_dssp ECCCCCCC
T ss_pred EecccCCC
Confidence 99998764
No 327
>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*
Probab=98.08 E-value=4.4e-06 Score=90.74 Aligned_cols=82 Identities=9% Similarity=-0.004 Sum_probs=55.5
Q ss_pred eEeeee-ccCCcEEEEEEEEe-------CCceEEEEEEeccc---CCHHHHHHHHHHHHHHHhCC-C--CceeeEeceee
Q 003963 508 TIGEQI-GQGSCGTVYHAVWY-------GSQDVAVKVFSRQE---YSDEVIHSFRQEVSLMKRLR-H--PNVLLFMGAVT 573 (783)
Q Consensus 508 ~i~~~L-G~G~fG~Vy~a~~~-------~~~~vAiK~i~~~~---~~~~~~~~~~~Ei~il~~l~-H--pnIv~l~~~~~ 573 (783)
...+.| +.|....+|++... .++.+++|+..... ... ...+.+|+.+++.|. + -.+.+++.++.
T Consensus 23 ~~~~~l~~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~~~~~~--~~~~~~E~~~l~~L~~~~~vpvP~v~~~~~ 100 (357)
T 3ats_A 23 TVESGVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVPVFP--TYRLDHQFEVIRLVGELTDVPVPRVRWIET 100 (357)
T ss_dssp EEEEEECTTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGGCCSSS--CCCHHHHHHHHHHHHHHCCSCCCCEEEEEC
T ss_pred EEEEECCCCCccceEEEEEEecccCCCCCCceEEEEeCCCCCccccCc--hhHHHHHHHHHHHHhhcCCCCCCcEEEEcc
Confidence 445778 88999999998754 24579999865432 100 124567888888774 2 34667777766
Q ss_pred cC---CceEEEEEecCCCCHH
Q 003963 574 SP---QRLCIVTEFLPRGSLF 591 (783)
Q Consensus 574 ~~---~~~~lV~E~~~ggsL~ 591 (783)
.. +..|+||||++|..+.
T Consensus 101 ~~~~~g~~~~v~e~l~G~~l~ 121 (357)
T 3ats_A 101 TGDVLGTPFFLMDYVEGVVPP 121 (357)
T ss_dssp SSTTTSSCEEEEECCCCBCCC
T ss_pred CCCccCCceEEEEecCCCChh
Confidence 55 4578999999886543
No 328
>4f3l_A Mclock, circadian locomoter output cycles protein kaput; BHLH, PAS, circadian rhythm proteins, transcription-activato; 2.27A {Mus musculus}
Probab=97.96 E-value=4.5e-05 Score=83.30 Aligned_cols=64 Identities=14% Similarity=0.169 Sum_probs=56.1
Q ss_pred CHHHHHHHHHHhCcceEEEcCCCcEEEecHHHHHHcCCChhhHcCCCccccccccccchHHHHH
Q 003963 128 TDRQYLNILQSMGQSVHIFDLSDRIIYWNRSAELLYGYSAEEALGQDAIELLTDGRDFDVAYDI 191 (783)
Q Consensus 128 ~~~~~~~ile~~~d~I~i~D~~G~Ii~~N~aae~L~Gys~eEllG~~~~~l~~~~~~~~~~~~l 191 (783)
.+++...+++++.+.|+++|.+|+|+|+|++++.++||+.+|++|+++.++++|++.......+
T Consensus 84 ~~~~~~~~l~a~~~~i~v~~~~G~i~yvs~~~~~~lGy~~~el~g~~~~~~ihp~D~~~~~~~l 147 (361)
T 4f3l_A 84 NEEFTQLMLEALDGFFLAIMTDGSIIYVSESVTSLLEHLPSDLVDQSIFNFIPEGEHSEVYKIL 147 (361)
T ss_dssp HHHHHHHHHHHTTEEEEEEETTSBEEEECTTHHHHHCCCHHHHTTSBGGGGSCGGGHHHHHHHH
T ss_pred HHHHHHHHHHhcCceEEEEcCCccEEEEechhhhhcCCCHHHhcCCcHHHhcCHHHHHHHHHHh
Confidence 3466778899999999999999999999999999999999999999999999998865544443
No 329
>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}
Probab=97.89 E-value=7.9e-05 Score=79.72 Aligned_cols=138 Identities=16% Similarity=0.083 Sum_probs=77.2
Q ss_pred eeeeccCCcEEEEEEEEeCCceEEEEEEecccCCHHHHHHHHHHHHHHHhCCC--CceeeEec------eeecCCceEEE
Q 003963 510 GEQIGQGSCGTVYHAVWYGSQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRH--PNVLLFMG------AVTSPQRLCIV 581 (783)
Q Consensus 510 ~~~LG~G~fG~Vy~a~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~H--pnIv~l~~------~~~~~~~~~lV 581 (783)
.+.|+.|..+.||++...+ +.+++|+.... . ..+..|+.+++.|.. -.+++++. +....+..+++
T Consensus 37 ~~~l~gG~~n~~~~v~~~~-~~~vlk~~~~~---~---~~~~~e~~~l~~L~~~g~~vp~~~~~~~g~~~~~~~~~~~~l 109 (346)
T 2q83_A 37 IDVIQGNQMALVWKVHTDS-GAVCLKRIHRP---E---KKALFSIFAQDYLAKKGMNVPGILPNKKGSLYSKHGSFLFVV 109 (346)
T ss_dssp EEECC----CEEEEEEETT-EEEEEEEECSC---H---HHHHHHHHHHHHHHHHTCSSCCBCCCTTSCSCEEETTEEEEE
T ss_pred eeeccccccCcEEEEEeCC-CCEEEEecCCC---H---HHHHHHHHHHHHHHHcCCCCCceeecCCCCEEEEECCEEEEE
Confidence 4567777889999987643 46999998652 2 223345555555531 12334443 12345678999
Q ss_pred EEecCCCCHH-----------HHH---hh--cCC--c---------chHHH-----------------------------
Q 003963 582 TEFLPRGSLF-----------RLL---QR--NTT--K---------LDWRR----------------------------- 605 (783)
Q Consensus 582 ~E~~~ggsL~-----------~~L---~~--~~~--~---------l~~~~----------------------------- 605 (783)
|+|++|..+. ..| .. ... + ..+..
T Consensus 110 ~~~i~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 189 (346)
T 2q83_A 110 YDWIEGRPFELTVKQDLEFIMKGLADFHTASVGYQPPNGVPIFTKLGRWPNHYTKRCKQMETWKLMAEAEKEDPFSQLYL 189 (346)
T ss_dssp EECCCCBCCCTTSHHHHHHHHHHHHHHHHHHTTCCCCTTCCCCBCTTCHHHHHHHHHHHHHHHHHHHHHCSSCHHHHHHH
T ss_pred EEeecCccCCCCCHHHHHHHHHHHHHHHHhCCCCCCCccchhcccccchHHHHHHHHHHHHHHHHHHHhccCCcHHHHHH
Confidence 9999985431 111 11 000 0 01110
Q ss_pred --HHHHHHHHHHHHHHHHh-----------CCCCEEecCCCCCCEEEcCCCcEEEEecCCCc
Q 003963 606 --RILMALDIARGVSYLHH-----------CNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSR 654 (783)
Q Consensus 606 --~~~i~~qi~~aL~~LH~-----------~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~ 654 (783)
...+..++..++.+|+. ....++|+|+++.|||++.++.+.|+||+.+.
T Consensus 190 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~lIDfe~a~ 251 (346)
T 2q83_A 190 QEIDGFIEDGLRIKDRLLQSTYVPWTEQLKKSPNLCHQDYGTGNTLLGENEQIWVIDLDTVS 251 (346)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHSCCEECSSCSTTSEEECGGGCEEECCCTTCE
T ss_pred HHHHHHHHHHHHHHHHHHhchHHHHHHhccccCceecCCCCcccEEEeCCCcEEEEehhhcc
Confidence 00111123345566652 12349999999999999878899999999774
No 330
>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*
Probab=97.86 E-value=3.8e-05 Score=84.73 Aligned_cols=78 Identities=21% Similarity=0.156 Sum_probs=49.4
Q ss_pred EeeeeccCCcEEEEEEEEe-CCceEEEEEEecccC--CH---HHHHHHHHHHHHHHhCCC--C-ceeeEeceeecCCceE
Q 003963 509 IGEQIGQGSCGTVYHAVWY-GSQDVAVKVFSRQEY--SD---EVIHSFRQEVSLMKRLRH--P-NVLLFMGAVTSPQRLC 579 (783)
Q Consensus 509 i~~~LG~G~fG~Vy~a~~~-~~~~vAiK~i~~~~~--~~---~~~~~~~~Ei~il~~l~H--p-nIv~l~~~~~~~~~~~ 579 (783)
..+.||.|.++.||++... +++.++||....... .. .....+..|.++|+.+.. + .+++++.+ +....+
T Consensus 34 ~~~~lg~G~~n~vyrv~~~~~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L~~l~~~~~~~vP~~~~~--d~~~~~ 111 (397)
T 2olc_A 34 TCQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYS--DTEMAV 111 (397)
T ss_dssp EEEECCSSSSEEEEEEEC----CEEEEEEECCC-------CCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEE--ETTTTE
T ss_pred EEEECCCCceEEEEEEEECCCCcEEEEEecchhhcccCCCCcCcHHHHHHHHHHHHHhhhhCCCCcCeEEEE--cCCccE
Confidence 3568999999999999754 356899998653211 00 012345678888887742 3 34456543 345568
Q ss_pred EEEEecCCC
Q 003963 580 IVTEFLPRG 588 (783)
Q Consensus 580 lV~E~~~gg 588 (783)
+||||+++.
T Consensus 112 lvmE~l~g~ 120 (397)
T 2olc_A 112 TVMEDLSHL 120 (397)
T ss_dssp EEECCCTTS
T ss_pred EEEEeCCCc
Confidence 999999763
No 331
>4f3l_B BMAL1B; BHLH, PAS, circadian rhythm proteins, transcription-activato; 2.27A {Mus musculus}
Probab=97.74 E-value=6.9e-05 Score=82.64 Aligned_cols=60 Identities=18% Similarity=0.257 Sum_probs=52.6
Q ss_pred HHHHHHHHHHhCcceEEEcCC-CcEEEecHHHHHHcCCChhhHcCCCccccccccccchHH
Q 003963 129 DRQYLNILQSMGQSVHIFDLS-DRIIYWNRSAELLYGYSAEEALGQDAIELLTDGRDFDVA 188 (783)
Q Consensus 129 ~~~~~~ile~~~d~I~i~D~~-G~Ii~~N~aae~L~Gys~eEllG~~~~~l~~~~~~~~~~ 188 (783)
+++...+++++...|++++.+ |+|+|+|++++.++||+.+|++|+++.++++|++...+.
T Consensus 85 ~~~~~~ll~~~~gfi~v~~~~~G~i~yvs~~~~~~lG~~~~el~g~~~~~~ihp~D~~~~~ 145 (387)
T 4f3l_B 85 DELKHLILRAADGFLFVVGCDRGKILFVSESVFKILNYSQNDLIGQSLFDYLHPKDIAKVK 145 (387)
T ss_dssp HHHHHHHHHTCCSEEEEEETTTCBEEEECTTHHHHHSCCHHHHTTSBGGGGBCGGGHHHHH
T ss_pred HHHHHHHHhcCCCEEEEEecCCeEEEEEchhhHHHcCCCHHHHCCCcHHHhcCCCCHHHHH
Confidence 345577889999999999987 999999999999999999999999999999998864443
No 332
>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}
Probab=97.60 E-value=0.00028 Score=75.34 Aligned_cols=77 Identities=23% Similarity=0.195 Sum_probs=60.4
Q ss_pred eEeeeeccCCcEEEEEEEEeCCceEEEEEEecccCCHHHHHHHHHHHHHHHhCC---CCceeeEeceeecCCceEEEEEe
Q 003963 508 TIGEQIGQGSCGTVYHAVWYGSQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLR---HPNVLLFMGAVTSPQRLCIVTEF 584 (783)
Q Consensus 508 ~i~~~LG~G~fG~Vy~a~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~---HpnIv~l~~~~~~~~~~~lV~E~ 584 (783)
.-.+.|+.|.+..+|++.. .++.+++|+..... ...+..|...|+.|. ...+++++.++...+..++||||
T Consensus 39 ~~~~~l~gG~~n~~y~v~~-~~~~~vlK~~~~~~-----~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~~g~~~lvme~ 112 (312)
T 3jr1_A 39 KHKEKLYSGEMNEIWLIND-EVQTVFVKINERSY-----RSMFRAEADQLALLAKTNSINVPLVYGIGNSQGHSFLLLEA 112 (312)
T ss_dssp CEEEEECCSSSSEEEEEES-SSCEEEEEEEEGGG-----HHHHHHHHHHHHHHHHTTSSBCCCEEEEEECSSEEEEEEEC
T ss_pred eeeEEeCCccceeeeEEEE-CCCeEEEEeCCccc-----HHHHHHHHHHHHHHHhhCCCCcceEEEEeecCCceEEEEEe
Confidence 3457799999999999875 45689999876432 356788999888884 35678888888878889999999
Q ss_pred cCCCCH
Q 003963 585 LPRGSL 590 (783)
Q Consensus 585 ~~ggsL 590 (783)
++|..+
T Consensus 113 l~G~~~ 118 (312)
T 3jr1_A 113 LNKSKN 118 (312)
T ss_dssp CCCCCC
T ss_pred ccCCCC
Confidence 998753
No 333
>3rty_A Period circadian protein; PAS domain, signalling, timeless, circadian clock protein; 2.85A {Drosophila melanogaster} PDB: 1wa9_A 3gec_A
Probab=97.55 E-value=0.00016 Score=77.99 Aligned_cols=97 Identities=15% Similarity=0.141 Sum_probs=66.7
Q ss_pred eEEEc-CCCcEEEecHHHHHHcCCChhhHcCCCccccccccccchHHHHHHHHHHhCCeE------------EEEEEEE-
Q 003963 143 VHIFD-LSDRIIYWNRSAELLYGYSAEEALGQDAIELLTDGRDFDVAYDIVHRIKMGERW------------TGQFPAK- 208 (783)
Q Consensus 143 I~i~D-~~G~Ii~~N~aae~L~Gys~eEllG~~~~~l~~~~~~~~~~~~l~~~l~~g~~~------------~~e~~~~- 208 (783)
+++++ .+|+|+|+|+++..++||+.+|++|+++.+++++++... ++..+..|.++ ....+..
T Consensus 6 ~~vv~~~~G~i~yvS~~~~~~LGy~~~el~G~s~~d~ihp~D~~~----f~~~L~~gl~~~~~~~~~~~~~rsffcR~~r 81 (339)
T 3rty_A 6 CCVISMHDGIVLYTTPSITDVLGYPRDMWLGRSFIDFVHLKDRAT----FASQITTGIPIAESRGSVPKDAKSTFCVMLR 81 (339)
T ss_dssp EEEEETTTCBEEEECTTHHHHHCCCTTSSTTSBGGGGBCHHHHHH----HHHHHHTTSCCC----------CCEEEEEEE
T ss_pred EEEEECCCcEEEEEChHHHHHcCCCHHHHCCCcHHHhcCHHHHHH----HHHHHhcCCCCCccccCCCCCCceEEEEEEe
Confidence 45677 799999999999999999999999999999999887543 44555555322 1111111
Q ss_pred ---------------cCCCCEEEEEEEEEEEECC---------CCCEEEEEEEEEehHH
Q 003963 209 ---------------TKTEERVLVVATNTPFYDD---------DGTLVGIVCVSTDSRP 243 (783)
Q Consensus 209 ---------------~kdG~~~~v~~~~~Pi~d~---------~G~v~g~v~i~rDITe 243 (783)
.+++..+|+..+..++.++ +|...+++.+..+|+.
T Consensus 82 r~~~l~s~gy~v~~~~~~~~p~~l~~~~~~~~~e~~~~~~~~~~g~~~~lv~~a~~i~s 140 (339)
T 3rty_A 82 RYRGLKSGGFGVIGRPVSYEPFRLGLTFREAPEEARPDNYMVSNGTNMLLVICATPIKS 140 (339)
T ss_dssp CCC-------------CCEEEEEEEEEEEECCCC----------CCCEEEEEEEEECCC
T ss_pred ccCCCCcCCcceecccccceeEEEEEEEeccccccccccccccCCceEEEEEEcccCCc
Confidence 1223345555555666555 5677788889999874
No 334
>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}
Probab=97.46 E-value=0.00034 Score=77.72 Aligned_cols=76 Identities=16% Similarity=0.112 Sum_probs=47.7
Q ss_pred CEEecCCCCCCEEEcCCCcEEEEecCCCcccccccccccCCC-CCCcccCcccccCCC---CCchhHHHHHHHHHHHHHc
Q 003963 626 PIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETYLTTKTGK-GTPQWMAPEVLRNEP---SDEKSDVYSFGVILWELAT 701 (783)
Q Consensus 626 ~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~~-Gt~~Y~aPE~~~~~~---~s~~sDIwSLG~il~ellt 701 (783)
.++|+|++|.|||++.++ ++|+||+.+.............. -...|++|+...... .....++..+...+|+.++
T Consensus 233 ~liHGDl~~~Nil~~~~~-~~lID~e~a~~G~p~~Dla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~ 311 (420)
T 2pyw_A 233 ALIHGDLHTGSVMVTQDS-TQVIDPEFSFYGPMGFDIGAYLGNLILAFFAQDGHATQENDRKEYKQWILRTIEQTWNLFN 311 (420)
T ss_dssp EEECSCCSGGGEEECSSC-EEECCCTTCEEECHHHHHHHHHHHHHHHHHHGGGGCCSSCCSHHHHHHHHHHHHHHHHHHH
T ss_pred eEEecCCCCCcEEEeCCC-CEEEeCcccccCchHHHHHHHHHHHHHHHHhcccccccccchHHHHHHHHHHHHHHHHHHH
Confidence 399999999999998876 99999999876543221111000 013456665543211 1234556677888887776
Q ss_pred C
Q 003963 702 E 702 (783)
Q Consensus 702 G 702 (783)
+
T Consensus 312 ~ 312 (420)
T 2pyw_A 312 K 312 (420)
T ss_dssp H
T ss_pred H
Confidence 4
No 335
>2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A
Probab=97.44 E-value=0.0011 Score=66.36 Aligned_cols=139 Identities=12% Similarity=0.138 Sum_probs=95.7
Q ss_pred CCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHh-CCCCEEecCCCCCCEEEcCCCcEEEEecCCCcccccccccccCC
Q 003963 588 GSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHH-CNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETYLTTKTG 666 (783)
Q Consensus 588 gsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~-~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~ 666 (783)
.+|.++|+..+.+++++++|.++.|.+.+|.-+-. .. -..+=+.|..|+|..+|.|.+.+ +.+.
T Consensus 33 vSL~eIL~~~~~PlsEEqaWALc~Qc~~~L~~~~~~~~--~~~~i~~~~~i~l~~dG~V~f~~-~~s~------------ 97 (229)
T 2yle_A 33 LSLEEILRLYNQPINEEQAWAVCYQCCGSLRAAARRRQ--PRHRVRSAAQIRVWRDGAVTLAP-AADD------------ 97 (229)
T ss_dssp EEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTC--CCCCCCSGGGEEEETTSCEEECC-C---------------
T ss_pred ccHHHHHHHcCCCcCHHHHHHHHHHHHHHHHhhhhccc--CCceecCCcceEEecCCceeccc-cccc------------
Confidence 38999999989999999999999999999887622 11 11233456899999999998753 1110
Q ss_pred CCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhcccccccCCCCCCHHHHHHHHHhhhh-
Q 003963 667 KGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAAIVESCWHS- 745 (783)
Q Consensus 667 ~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~l~~LI~~cL~~- 745 (783)
.....+.+||... ...+.+.=|||||++||.-+--..| ...+..+++.|.+||..|..-
T Consensus 98 ~~~~~~~~pe~~~-~~~te~~~IysLG~tLY~ALDygL~-------------------e~eE~eLS~~LE~LL~~Mt~~~ 157 (229)
T 2yle_A 98 AGEPPPVAGKLGY-SQCMETEVIESLGIIIYKALDYGLK-------------------ENEERELSPPLEQLIDHMANTV 157 (229)
T ss_dssp ---------CCSS-SSSCHHHHHHHHHHHHHHHHTTTCC-------------------TTEEECCCHHHHHHHHHHTTCC
T ss_pred ccccCCCChhhcc-ccchHHHHHHHHHHHHHHHhhcCCC-------------------cccchhhCHHHHHHHHHHHhcc
Confidence 1123466888763 3456888999999999998754332 223456899999999999765
Q ss_pred ------------------------CCCCCCCHHHHHHHHH
Q 003963 746 ------------------------DPQCRPSFQELVDKLR 761 (783)
Q Consensus 746 ------------------------dP~~RPsa~ell~~L~ 761 (783)
.+..|+++++|++.-.
T Consensus 158 ~d~~~~DeG~~~~~eg~~d~~~~~~~~~~~sl~~Vi~~C~ 197 (229)
T 2yle_A 158 EADGSNDEGYEAAEEGLGDEDEKRKISAIRSYRDVMKLCA 197 (229)
T ss_dssp C--------------------CCSCCCCCCSHHHHHHHHH
T ss_pred cccccccccccccccccccccccccccCcCCHHHHHHHHH
Confidence 2357889999987654
No 336
>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}
Probab=97.22 E-value=0.0012 Score=69.24 Aligned_cols=80 Identities=14% Similarity=0.083 Sum_probs=57.1
Q ss_pred ccceeEeeeeccCCcEEEEEEEEeCCceEEEEEEecccCCHHHHHHHHHHHHHHHhCCC---CceeeEeceeecCCceEE
Q 003963 504 WEDLTIGEQIGQGSCGTVYHAVWYGSQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRH---PNVLLFMGAVTSPQRLCI 580 (783)
Q Consensus 504 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~H---pnIv~l~~~~~~~~~~~l 580 (783)
.....-.+.+|.|..+.||++...+++.|++|+........ ...+..|+..|+.|.- --+++++++. .-++
T Consensus 14 G~~v~~v~~~g~G~~~~vyrv~l~DG~~~~vK~~~~~~~~~--~~~~~~Ea~~L~~L~~~~~vpvP~v~~~~----~~~l 87 (288)
T 3f7w_A 14 GREVAAVAERGHSHRWHLYRVELADGTPLFVKALPDDAPAL--DGLFRAEALGLDWLGRSFGSPVPQVAGWD----DRTL 87 (288)
T ss_dssp CCCEEEEEEEEEETTEEEEEEEETTSCEEEEEECCTTCCCC--TTHHHHHHHHHHHHTCSTTCCSCCEEEEE----TTEE
T ss_pred CCCeEEEEecCCCCCeEEEEEEECCCCEEEEEEeCCCCcch--hhHHHHHHHHHHHHHhhCCCCcceEEecc----CceE
Confidence 34566778899999999999998888899999865443221 1346789999998842 1345555542 3488
Q ss_pred EEEecCCCC
Q 003963 581 VTEFLPRGS 589 (783)
Q Consensus 581 V~E~~~ggs 589 (783)
||||+.++.
T Consensus 88 v~e~l~~~~ 96 (288)
T 3f7w_A 88 AMEWVDERP 96 (288)
T ss_dssp EEECCCCCC
T ss_pred EEEeecccC
Confidence 999998764
No 337
>1oj5_A Steroid receptor coactivator 1A; transcriptional coactivator, complex, LXXLL motif, transcriptional regulation; 2.2A {Mus musculus} SCOP: d.110.3.8
Probab=97.17 E-value=0.00066 Score=62.08 Aligned_cols=81 Identities=9% Similarity=-0.019 Sum_probs=69.1
Q ss_pred EcCCCcEEEecHHHHHHcCCCh--hhHcCCCccccccccccc--hHHHHHHHHHHhCCeEEEEEEEEcCCCCEEEEEEEE
Q 003963 146 FDLSDRIIYWNRSAELLYGYSA--EEALGQDAIELLTDGRDF--DVAYDIVHRIKMGERWTGQFPAKTKTEERVLVVATN 221 (783)
Q Consensus 146 ~D~~G~Ii~~N~aae~L~Gys~--eEllG~~~~~l~~~~~~~--~~~~~l~~~l~~g~~~~~e~~~~~kdG~~~~v~~~~ 221 (783)
.|.+|+|+++..... ..+|.. +||+|+.+.+++++++.. .......+++..|+....-++++.++|..+|+....
T Consensus 13 h~~dGKf~~vDq~~~-r~~~~~g~qdLlGrsiy~f~H~~D~~~s~l~~h~~~vl~~Gq~~S~~YRfr~k~g~~V~~qT~s 91 (132)
T 1oj5_A 13 QDTTGKIISIDTSSL-RAAGRTGWEDLVRKCIYAFFQPQGREPSYARQLFQEVMTRGTASSPSYRFILNDGTMLSAHTRC 91 (132)
T ss_dssp ECTTCCEEEEECHHH-HTTCCSCHHHHHHHHHHHHTSCBTTBCCHHHHHHHHHHHHSEEECCCEEEECTTSCEEEEEEEE
T ss_pred ecCCCcEEEEecccc-cccccccHHHHHHHHHHHHhCcccchHHHHHHHHHHHHHcCCccccceEEEecCCcEEEEEEEE
Confidence 788999999999987 477777 999999999999998854 555566778888888888899999999999999998
Q ss_pred EEEECC
Q 003963 222 TPFYDD 227 (783)
Q Consensus 222 ~Pi~d~ 227 (783)
..+++.
T Consensus 92 k~f~np 97 (132)
T 1oj5_A 92 KLCYPQ 97 (132)
T ss_dssp EEECC-
T ss_pred EEecCC
Confidence 888764
No 338
>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}
Probab=97.17 E-value=0.001 Score=70.26 Aligned_cols=71 Identities=13% Similarity=0.140 Sum_probs=44.4
Q ss_pred eeeeccCCcEEEEEEEEeCCceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCce-eeEeceeecCCceEEEEEec-CC
Q 003963 510 GEQIGQGSCGTVYHAVWYGSQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNV-LLFMGAVTSPQRLCIVTEFL-PR 587 (783)
Q Consensus 510 ~~~LG~G~fG~Vy~a~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnI-v~l~~~~~~~~~~~lV~E~~-~g 587 (783)
++.|+.|....+|++ +.+++|+....... .....+|+.+++.+...++ .+++.+. ...-++++||+ +|
T Consensus 23 i~~l~gG~tN~~~~~-----~~~vlR~~~~~~~~---~~~r~~E~~~l~~l~~~g~~P~~~~~~--~~~~~~v~e~i~~g 92 (301)
T 3dxq_A 23 PLERLGGLTNLVFRA-----GDLCLRIPGKGTEE---YINRANEAVAAREAAKAGVSPEVLHVD--PATGVMVTRYIAGA 92 (301)
T ss_dssp CEEEESCSSEEEEEE-----TTEEEEEECC-------CCCHHHHHHHHHHHHHTTSSCCEEEEC--TTTCCEEEECCTTC
T ss_pred eeEcCCcccccccee-----eeEEEECCCCCccc---eeCHHHHHHHHHHHHHcCCCCceEEEE--CCCCEEEEeecCCC
Confidence 678899999999998 57999987643110 1112357777776642222 4555443 33457899999 66
Q ss_pred CCH
Q 003963 588 GSL 590 (783)
Q Consensus 588 gsL 590 (783)
.+|
T Consensus 93 ~~l 95 (301)
T 3dxq_A 93 QTM 95 (301)
T ss_dssp EEC
T ss_pred ccC
Confidence 444
No 339
>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}
Probab=97.06 E-value=0.0014 Score=70.07 Aligned_cols=33 Identities=36% Similarity=0.443 Sum_probs=28.0
Q ss_pred CEEecCCCCCCEEEcCC----CcEEEEecCCCccccc
Q 003963 626 PIIHRDLKSSNLLVDKH----WTVKVGDFGLSRLKHE 658 (783)
Q Consensus 626 ~IvHrDIKp~NILl~~~----~~vkL~DFGla~~~~~ 658 (783)
.++|+|+.+.|||++.+ +.+.|+||+.+.....
T Consensus 184 ~lvHgD~~~~Nil~~~~~~~~~~~~lIDf~~a~~G~~ 220 (333)
T 3csv_A 184 VFVHRDFHAQNLLWLPEREGLARVGVIDFQDAKLGHR 220 (333)
T ss_dssp EEECSCCSGGGEEECTTSCGGGGEEECCCTTCEEECT
T ss_pred eeEeCCcCcccEEeccCcCCCCCeEEEeCCCcCcCCC
Confidence 39999999999999874 6899999999875443
No 340
>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6
Probab=97.01 E-value=0.0015 Score=69.38 Aligned_cols=143 Identities=17% Similarity=0.142 Sum_probs=79.0
Q ss_pred eEeeeeccCCcEEEEEEEEeCCceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCc--eeeEece------eecCCceE
Q 003963 508 TIGEQIGQGSCGTVYHAVWYGSQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPN--VLLFMGA------VTSPQRLC 579 (783)
Q Consensus 508 ~i~~~LG~G~fG~Vy~a~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~Hpn--Iv~l~~~------~~~~~~~~ 579 (783)
.-.+.|+.|....+|++...+ +.+++|+....... ..+..|+.+++.|.... +++++.. ....+..+
T Consensus 25 ~~~~~i~~G~~n~~~~v~~~~-g~~vlk~~~~~~~~----~~l~~e~~~l~~L~~~g~~vP~~~~~~~g~~~~~~~g~~~ 99 (322)
T 2ppq_A 25 TSYKGIAEGVENSNFLLHTTK-DPLILTLYEKRVEK----NDLPFFLGLMQHLAAKGLSCPLPLPRKDGELLGELSGRPA 99 (322)
T ss_dssp EEEEEECC---EEEEEEEESS-CCEEEEEECC---C----CHHHHHHHHHHHHHHTTCCCCCBCCBTTCCSCEEETTEEE
T ss_pred eEeeccCCCcccceEEEEeCC-ccEEEEEeCCCCCH----HHHHHHHHHHHHHHHCCCCCCcccCCCCCCEEEEECCEEE
Confidence 445678889999999997644 47999998653111 23456777777664212 3333321 12235678
Q ss_pred EEEEecCCCCHH-----------HHH---hhc----CCc-------chHHHHHH------------HHHHHHHHHHHHHh
Q 003963 580 IVTEFLPRGSLF-----------RLL---QRN----TTK-------LDWRRRIL------------MALDIARGVSYLHH 622 (783)
Q Consensus 580 lV~E~~~ggsL~-----------~~L---~~~----~~~-------l~~~~~~~------------i~~qi~~aL~~LH~ 622 (783)
++|+|++|..+. ..| ... ..+ ..+...+. +...+...+.++..
T Consensus 100 ~l~~~l~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~l~~~l~~~~~~l~~ 179 (322)
T 2ppq_A 100 ALISFLEGMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKSEERADEVEKGLREEIRPEIDYLAA 179 (322)
T ss_dssp EEEECCCCBCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHHHHHHHHHHGGGGGGTSTTHHHHHHHHHHHHHH
T ss_pred EEEEeCCCcCCCCCCHHHHHHHHHHHHHHHHHhccCCCcccCccChHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHh
Confidence 999999885421 111 110 000 01111000 00113344555542
Q ss_pred C-----CCCEEecCCCCCCEEEcCCCcEEEEecCCCcc
Q 003963 623 C-----NPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRL 655 (783)
Q Consensus 623 ~-----~~~IvHrDIKp~NILl~~~~~vkL~DFGla~~ 655 (783)
. ...++|+|+.+.|||++.++.+.|+||+.+..
T Consensus 180 ~~~~~~~~~liHgDl~~~Nil~~~~~~~~lIDf~~a~~ 217 (322)
T 2ppq_A 180 HWPKDLPAGVIHADLFQDNVFFLGDELSGLIDFYFACN 217 (322)
T ss_dssp HCCCSSCEEEECSCCCGGGEEEETTEEEEECCCTTCEE
T ss_pred hCcccCCcccCCCCCCccCEEEeCCceEEEecchhccC
Confidence 1 12399999999999998876568999998754
No 341
>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8
Probab=96.78 E-value=0.0025 Score=71.04 Aligned_cols=72 Identities=14% Similarity=0.202 Sum_probs=48.4
Q ss_pred EeeeeccCCcEEEEEEEEeC--------CceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCc-eeeEeceeecCCceE
Q 003963 509 IGEQIGQGSCGTVYHAVWYG--------SQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPN-VLLFMGAVTSPQRLC 579 (783)
Q Consensus 509 i~~~LG~G~fG~Vy~a~~~~--------~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~Hpn-Iv~l~~~~~~~~~~~ 579 (783)
-++.|+.|....||++.... ++.+++|+..... . ...+.+|..+++.|...+ .+++++.+.. .
T Consensus 77 ~v~~l~gG~tN~~y~v~~~~~~~~~~~~~~~~vlRi~~~~~-~---~~~li~E~~~l~~L~~~g~~P~l~~~~~~----g 148 (429)
T 1nw1_A 77 RISRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNPE-T---ESHLVAESVIFTLLSERHLGPKLYGIFSG----G 148 (429)
T ss_dssp EEEEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSCC-C---HHHHHHHHHHHHHHHHTTSSSCEEEEETT----E
T ss_pred EEEEeCCCcccceEEEEeCCCccccCCCCceEEEEEeCCCC-c---HHHHHHHHHHHHHHHhCCCCCcEEEEeCC----C
Confidence 35678889999999998653 3679999874321 1 123446888888875333 3566765542 3
Q ss_pred EEEEecCCC
Q 003963 580 IVTEFLPRG 588 (783)
Q Consensus 580 lV~E~~~gg 588 (783)
+||||++|.
T Consensus 149 ~v~e~l~G~ 157 (429)
T 1nw1_A 149 RLEEYIPSR 157 (429)
T ss_dssp EEECCCCEE
T ss_pred EEEEEeCCc
Confidence 899999863
No 342
>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6
Probab=96.78 E-value=0.0086 Score=63.56 Aligned_cols=75 Identities=11% Similarity=0.061 Sum_probs=47.9
Q ss_pred eeeccCCcEEEEEEEEeCCceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCC--ceeeEece-----eecCCceEEEEE
Q 003963 511 EQIGQGSCGTVYHAVWYGSQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHP--NVLLFMGA-----VTSPQRLCIVTE 583 (783)
Q Consensus 511 ~~LG~G~fG~Vy~a~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~Hp--nIv~l~~~-----~~~~~~~~lV~E 583 (783)
..|+ |....||++...+++.+++|+........ ..+..|..+++.|... .+++++.. ....+..+++|+
T Consensus 32 ~~l~-g~~n~~y~v~~~~g~~~vlK~~~~~~~~~---~~~~~E~~~~~~L~~~g~~vp~~~~~~g~~~~~~~g~~~~l~~ 107 (328)
T 1zyl_A 32 TPLN-SYENRVYQFQDEDRRRFVVKFYRPERWTA---DQILEEHQFALQLVNDEVPVAAPVAFNGQTLLNHQGFYFAVFP 107 (328)
T ss_dssp EEEC-CSSSEEEEECCTTCCCEEEEEECTTTSCH---HHHHHHHHHHHHHHHTTCSBCCCCCBTTBSCEEETTEEEEEEE
T ss_pred Eeec-CcccceEEEEcCCCCEEEEEEcCCCCCCH---HHHHHHHHHHHHHHHcCCeecceeecCCcEEEEECCEEEEEEE
Confidence 4566 88889998876555679999986443333 3455677777777421 24444443 122455688999
Q ss_pred ecCCCC
Q 003963 584 FLPRGS 589 (783)
Q Consensus 584 ~~~ggs 589 (783)
|++|..
T Consensus 108 ~i~G~~ 113 (328)
T 1zyl_A 108 SVGGRQ 113 (328)
T ss_dssp CCCCEE
T ss_pred ecCCCC
Confidence 998743
No 343
>4dj2_A Period circadian protein homolog 1; PAS domains, circadian clock protein, protein binding; 2.75A {Mus musculus}
Probab=96.54 E-value=0.0009 Score=71.58 Aligned_cols=65 Identities=18% Similarity=0.143 Sum_probs=53.9
Q ss_pred CcCCCCHHHHHHH-----HHHhCcceEEEcCC-CcEEEecHHHHHHcCCChhhHcCCCccccccccccchH
Q 003963 123 SAFNFTDRQYLNI-----LQSMGQSVHIFDLS-DRIIYWNRSAELLYGYSAEEALGQDAIELLTDGRDFDV 187 (783)
Q Consensus 123 ~a~~~~~~~~~~i-----le~~~d~I~i~D~~-G~Ii~~N~aae~L~Gys~eEllG~~~~~l~~~~~~~~~ 187 (783)
++.-++++.++.+ |+++..=++++..+ |+|+|+++.+..++||+.+|++|+.+.+++++++...+
T Consensus 14 ~~~~~s~eel~~l~~e~lLqaldGF~~vvs~~~G~i~yvS~sv~~~Lg~~~~~l~g~s~~d~iHp~D~~~f 84 (320)
T 4dj2_A 14 DMSTYTLEELEHITSEYTLRNQDTFSVAVSFLTGRIVYISEQAGVLLRCKRDVFRGARFSELLAPQDVGVF 84 (320)
T ss_dssp CCSEECHHHHHHHHHHHTTSCSSEEEEEEETTTCBEEEECTHHHHHHTSCSTTTTTSBGGGGBCHHHHHHH
T ss_pred CccccCHHHHHHHHHHHHHhccCCEEEEEECCCceEEEECcHHHHHhCcCHHHHcCCcHHHhcCHHHHHHH
Confidence 3455677888877 66676666778875 99999999999999999999999999999999885443
No 344
>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*
Probab=96.50 E-value=0.0059 Score=66.82 Aligned_cols=142 Identities=13% Similarity=0.151 Sum_probs=80.4
Q ss_pred ceeEeeeeccCCcEEEEEEEEeC--------CceEEEEEEecccCCHHHHHHHHHHHHHHHhCC-CCceeeEeceeecCC
Q 003963 506 DLTIGEQIGQGSCGTVYHAVWYG--------SQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLR-HPNVLLFMGAVTSPQ 576 (783)
Q Consensus 506 ~y~i~~~LG~G~fG~Vy~a~~~~--------~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~-HpnIv~l~~~~~~~~ 576 (783)
.++ ++.|..|-...+|++.... .+.|++|+...... ....+.+|..+++.|. +.-..++++++..
T Consensus 52 ~l~-v~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlR~~g~~~~---~~~~~~rE~~vl~~L~~~gv~P~ll~~~~~-- 125 (379)
T 3feg_A 52 ELR-VYPVSGGLSNLLFRCSLPDHLPSVGEEPREVLLRLYGAILQ---GVDSLVLESVMFAILAERSLGPQLYGVFPE-- 125 (379)
T ss_dssp GCC-CEEC-----CCEEEEECCTTSCCCSSCCSEEEEEECC---C---CHHHHHHHHHHHHHHHHTTSSCCEEEEETT--
T ss_pred ceE-EEEcCCcccccEEEEEeCCCccccCCCCCeEEEEECCCccc---hHHHHHHHHHHHHHHHhcCCCCeEEEEcCC--
Confidence 344 3567778899999988642 35799998533211 1234558999888874 3333567766653
Q ss_pred ceEEEEEecCCCCHH--------------HHHh---hcC----Ccc--hHHHHHHHHHHHHH------------------
Q 003963 577 RLCIVTEFLPRGSLF--------------RLLQ---RNT----TKL--DWRRRILMALDIAR------------------ 615 (783)
Q Consensus 577 ~~~lV~E~~~ggsL~--------------~~L~---~~~----~~l--~~~~~~~i~~qi~~------------------ 615 (783)
.+||||++|..|. +.|. ... ... -+.++..+..++-.
T Consensus 126 --g~v~e~i~G~~l~~~~l~~p~~~~~ia~~La~LH~~~~~~~~~~~~l~~~i~~w~~~~~~~~~~~~~~~~~~~~~~l~ 203 (379)
T 3feg_A 126 --GRLEQYIPSRPLKTQELREPVLSAAIATKMAQFHGMEMPFTKEPHWLFGTMERYLKQIQDLPPTGLPEMNLLEMYSLK 203 (379)
T ss_dssp --EEEEECCSEEECCGGGGGCHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSCCSCCHHHHTTHH
T ss_pred --ccEEEEecCccCChhHhCCHHHHHHHHHHHHHHhCCCCCCCCCcccHHHHHHHHHHHHHhccCcccchhhhhhhHHHH
Confidence 3899999875432 1111 111 011 23344444433211
Q ss_pred -HHHH----HHhCC--CCEEecCCCCCCEEEcCC----CcEEEEecCCCcc
Q 003963 616 -GVSY----LHHCN--PPIIHRDLKSSNLLVDKH----WTVKVGDFGLSRL 655 (783)
Q Consensus 616 -aL~~----LH~~~--~~IvHrDIKp~NILl~~~----~~vkL~DFGla~~ 655 (783)
.+.. |...+ ..++|+|+.+.|||++.+ +.+.|+||..+..
T Consensus 204 ~~~~~L~~~L~~~~~~~~~~H~D~~~~Nil~~~~~~~~~~~~~IDwE~a~~ 254 (379)
T 3feg_A 204 DEMGNLRKLLESTPSPVVFCHNDIQEGNILLLSEPENADSLMLVDFEYSSY 254 (379)
T ss_dssp HHHHHHHHHHHTSCCCEEEECSCCCGGGEEEESCC---CCEEECCCTTCEE
T ss_pred HHHHHHHHHHhhcCCCcEEEcCCCCCCeEEEcCCCCccCcEEEEecccCCc
Confidence 1222 22221 238999999999999876 7899999998753
No 345
>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}
Probab=96.38 E-value=0.0052 Score=69.04 Aligned_cols=74 Identities=11% Similarity=0.091 Sum_probs=47.1
Q ss_pred EeeeeccCCcEEEEEEEEeC-CceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCce-eeEeceeecCCceEEEEEecC
Q 003963 509 IGEQIGQGSCGTVYHAVWYG-SQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNV-LLFMGAVTSPQRLCIVTEFLP 586 (783)
Q Consensus 509 i~~~LG~G~fG~Vy~a~~~~-~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnI-v~l~~~~~~~~~~~lV~E~~~ 586 (783)
-++.|+.|-...+|++...+ .+.+++|+..... .. . -...+|..+++.|...++ +++++++. + .+||||++
T Consensus 112 ~i~~lsgG~tN~~y~v~~~~~~~~~vLRi~g~~~-~~-~-idR~~E~~vl~~L~~~gl~P~ll~~~~--~--G~v~e~I~ 184 (458)
T 2qg7_A 112 EFQIINGGITNILIKVKDMSKQAKYLIRLYGPKT-DE-I-INREREKKISCILYNKNIAKKIYVFFT--N--GRIEEFMD 184 (458)
T ss_dssp EEEEECC--CEEEEEEEETTTTEEEEEEEECC-C-CS-C-SCHHHHHHHHHHHTTSSSBCCEEEEET--T--EEEEECCC
T ss_pred EEEEcCCCeEeEEEEEEECCCCceEEEEECCCCh-hh-h-cCHHHHHHHHHHHHhcCCCCCEEEEeC--C--eEEEEeeC
Confidence 35678889999999998654 3679999874321 10 0 011468889998864444 56777663 2 35999998
Q ss_pred CCC
Q 003963 587 RGS 589 (783)
Q Consensus 587 ggs 589 (783)
|..
T Consensus 185 G~~ 187 (458)
T 2qg7_A 185 GYA 187 (458)
T ss_dssp SEE
T ss_pred Ccc
Confidence 743
No 346
>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*
Probab=96.29 E-value=0.017 Score=62.09 Aligned_cols=32 Identities=22% Similarity=0.347 Sum_probs=27.9
Q ss_pred CEEecCCCCCCEEEcCCCcEEEEecCCCcccc
Q 003963 626 PIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKH 657 (783)
Q Consensus 626 ~IvHrDIKp~NILl~~~~~vkL~DFGla~~~~ 657 (783)
.++|+|+.+.|||++.++.+.|+||+.+....
T Consensus 207 ~~~HgD~~~~N~l~~~~~~~~~iD~e~~~~~~ 238 (339)
T 3i1a_A 207 VLCHSDIHAGNVLVGNEESIYIIDWDEPMLAP 238 (339)
T ss_dssp EEECSCCCGGGEEECGGGCEEECCCSSCEEEC
T ss_pred eeEeCCCCcCCEEEeCCCeEEEEECCCCeeCC
Confidence 39999999999999988889999999876543
No 347
>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*
Probab=96.28 E-value=0.0034 Score=68.17 Aligned_cols=73 Identities=11% Similarity=0.124 Sum_probs=43.1
Q ss_pred eeeeccCCcEEEEEEEEeC---------CceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCc-eeeEeceeecCCceE
Q 003963 510 GEQIGQGSCGTVYHAVWYG---------SQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPN-VLLFMGAVTSPQRLC 579 (783)
Q Consensus 510 ~~~LG~G~fG~Vy~a~~~~---------~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~Hpn-Iv~l~~~~~~~~~~~ 579 (783)
.+.|+.|..-.+|++...+ .+.+++|+...... .......|..+++.|...+ ++++++.+. -+
T Consensus 38 ~~~l~~G~~N~~y~v~~~~~~~~~~~~~~~~~vlRi~~~~~~---~~~~~~~E~~~l~~L~~~g~~P~~~~~~~----~~ 110 (369)
T 3c5i_A 38 VKQILSGLTNQLFEVGLKEETANNYNSIRTRVLFRIYGKHVD---ELYNTISEFEVYKTMSKYKIAPQLLNTFN----GG 110 (369)
T ss_dssp EEEC----CCEEEEEEECHHHHTTCTTSCCEEEEEECCTTGG---GTSCHHHHHHHHHHHHHTTSSCCEEEEET----TE
T ss_pred EEEeCCcccceEEEEEeCCCCcccccCCCceEEEEecCCCcc---ceecHHHHHHHHHHHHhcCCCCceEEecC----Cc
Confidence 4678889889999998653 15789998654211 0112346788888775323 446665442 37
Q ss_pred EEEEecCCCC
Q 003963 580 IVTEFLPRGS 589 (783)
Q Consensus 580 lV~E~~~ggs 589 (783)
+||||++|..
T Consensus 111 ~v~e~i~G~~ 120 (369)
T 3c5i_A 111 RIEEWLYGDP 120 (369)
T ss_dssp EEEECCCSEE
T ss_pred EEEEEecCCc
Confidence 8999998743
No 348
>4dj3_A Period circadian protein homolog 3; PAS domain, circadian rhythm, protein binding; 2.50A {Mus musculus}
Probab=96.20 E-value=0.0014 Score=70.03 Aligned_cols=53 Identities=11% Similarity=0.107 Sum_probs=47.2
Q ss_pred HHHHhCcceEEEcCC-CcEEEecHHHHHHcCCChhhHcCCCccccccccccchH
Q 003963 135 ILQSMGQSVHIFDLS-DRIIYWNRSAELLYGYSAEEALGQDAIELLTDGRDFDV 187 (783)
Q Consensus 135 ile~~~d~I~i~D~~-G~Ii~~N~aae~L~Gys~eEllG~~~~~l~~~~~~~~~ 187 (783)
+++++..=+++++.+ |+|+|+++++..++||+.+|++|+.+.+++++++...+
T Consensus 31 ~L~aldgF~~vvs~~~G~i~yvS~~~~~~Lg~~~~el~g~s~~d~ihp~D~~~f 84 (317)
T 4dj3_A 31 TSKNTDTFAAVFSFLSGRLVHISEQAALILNSKRGFLKSVHFVDLLAPQDVRAF 84 (317)
T ss_dssp HTSCTTEEEEEEETTTCBEEEECTTHHHHTTCCHHHHHTSBGGGGBCGGGHHHH
T ss_pred HHhccCCEEEEEEcCCcEEEEECCHHHHHcCCCHHHHcCCchhhhcChhhHHHH
Confidence 488888778888886 99999999999999999999999999999999886443
No 349
>3gdi_A Period circadian protein homolog 2; tandem PAS domains, biological rhythms, cytoplasm, nucleus, phosphoprotein, transcription; 2.40A {Mus musculus}
Probab=95.71 E-value=0.0029 Score=67.27 Aligned_cols=55 Identities=11% Similarity=0.123 Sum_probs=38.9
Q ss_pred HHHHHHhCcceEEEcCC-CcEEEecHHHHHHcCCChhhHcCCCccccccccccchH
Q 003963 133 LNILQSMGQSVHIFDLS-DRIIYWNRSAELLYGYSAEEALGQDAIELLTDGRDFDV 187 (783)
Q Consensus 133 ~~ile~~~d~I~i~D~~-G~Ii~~N~aae~L~Gys~eEllG~~~~~l~~~~~~~~~ 187 (783)
+.+|+++..=+++++.+ |+|+|+++++..++||+.+|++|+.+.+++++++...+
T Consensus 18 ~lll~a~dgF~~vvs~~~G~i~yvS~s~~~~Lg~~~~el~g~s~~d~iHp~D~~~~ 73 (309)
T 3gdi_A 18 EYIVKNADMFAVAVSLVSGKILYISNQVASIFHCKKDAFSDAKFVEFLAPHDVSVF 73 (309)
T ss_dssp C----CTTEEEEEECTTTCBEEEECTTTTTTC-------CCSBGGGGBCTTTHHHH
T ss_pred HHHHHhcCCEEEEEECCCceEEEECCHHHHHcCCCHHHHcCCchhhccCHhHHHHH
Confidence 35678888888889986 99999999999999999999999999999999886443
No 350
>3f2s_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics consortium, SGC, hemicholinium-3, alternative splicing, cytoplasm; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 3g15_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=95.33 E-value=0.048 Score=59.99 Aligned_cols=145 Identities=14% Similarity=0.149 Sum_probs=81.6
Q ss_pred cceeEeeeeccCCcEEEEEEEEeC--------CceEEEEEEecccC------------CHH----HHHHHHHHHHHHHhC
Q 003963 505 EDLTIGEQIGQGSCGTVYHAVWYG--------SQDVAVKVFSRQEY------------SDE----VIHSFRQEVSLMKRL 560 (783)
Q Consensus 505 ~~y~i~~~LG~G~fG~Vy~a~~~~--------~~~vAiK~i~~~~~------------~~~----~~~~~~~Ei~il~~l 560 (783)
+++.+ +.|..|-...+|++.... .+.|++++.-.... +.+ ....+..|..+++.+
T Consensus 53 ~~i~v-~~l~gGlTN~~~~v~~~~~~~~~~~~~~~~llRi~G~~te~~~~~~~~~~~idR~~~~~~~~~~~~E~~~l~~L 131 (401)
T 3f2s_A 53 DEFHI-SVIRGGLSNMLFQCSLPDTTATLGDEPRKVLLRLYGAILQMRSCNKEGSEQAQKENEFQGAEAMVLESVMFAIL 131 (401)
T ss_dssp GGCEE-EEEECSSEEEEEEEECCTTCCCSSSCCSEEEEEEEEC-----------------------CHHHHHHHHHHHHH
T ss_pred hheEE-EEcCCCccCceEEEEeCCCcccccCCCccEEEEeCCCCcccccccccccchhhhhhhhccchhhHHHHHHHHHH
Confidence 34444 556668999999988643 25688988644211 000 011233588888887
Q ss_pred C-CCceeeEeceeecCCceEEEEEecCCCCHH--------------HHHh---hcCCc----c--hHHHHHHHHHHHH--
Q 003963 561 R-HPNVLLFMGAVTSPQRLCIVTEFLPRGSLF--------------RLLQ---RNTTK----L--DWRRRILMALDIA-- 614 (783)
Q Consensus 561 ~-HpnIv~l~~~~~~~~~~~lV~E~~~ggsL~--------------~~L~---~~~~~----l--~~~~~~~i~~qi~-- 614 (783)
. +.-..++++++.. .+|+||++|-+|. ..|. ....+ . -+..+..+..++.
T Consensus 132 ~~~Gi~Pkl~~~~~~----G~i~efI~G~~L~~~dl~~p~~~~~iA~~L~~LH~~~~~~~~~~~~l~~~i~~~~~~l~~~ 207 (401)
T 3f2s_A 132 AERSLGPKLYGIFPQ----GRLEQFIPSRRLDTEELSLPDISAEIAEKMATFHGMKMPFNKEPKWLFGTMEKYLKEVLRI 207 (401)
T ss_dssp HHTTSSCCEEEEETT----EEEEECCCEEECCGGGGGSHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHC
T ss_pred HhcCCCCeEEEEeCC----CeEEEecCCccCCHHHHhhHHHHHHHHHHHHHHhCCCCCCCCCcchHHHHHHHHHHHHHhc
Confidence 5 4345677777653 2899999864331 1111 11011 1 1222222322211
Q ss_pred --------------------HHH----HHHHhCC--CCEEecCCCCCCEEEcCC------CcEEEEecCCCc
Q 003963 615 --------------------RGV----SYLHHCN--PPIIHRDLKSSNLLVDKH------WTVKVGDFGLSR 654 (783)
Q Consensus 615 --------------------~aL----~~LH~~~--~~IvHrDIKp~NILl~~~------~~vkL~DFGla~ 654 (783)
.-+ .+|...+ ..++|+|+.+.|||++.+ +.+.|+||..+.
T Consensus 208 ~~~~~~~~~~~~~~~~~~l~~e~~~l~~~l~~~~~~~v~~H~Dl~~~Nil~~~~~~~~~~~~~~lID~E~a~ 279 (401)
T 3f2s_A 208 KFTEESRIKKLHKLLSYNLPLELENLRSLLESTPSPVVFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSS 279 (401)
T ss_dssp CCCSHHHHHHHHHHHTTCHHHHHHHHHHHHHTSCCCEEEECSCCCGGGEEEETTGGGCSSSCEEECCCTTCE
T ss_pred cCcchhhhhhhhhhhhHHHHHHHHHHHHHHhhcCCCeeEEeccCCcccEEEcCCcccCcccceEEEeeccCC
Confidence 111 2233222 238999999999999876 789999999875
No 351
>3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum}
Probab=93.24 E-value=0.13 Score=56.85 Aligned_cols=74 Identities=9% Similarity=0.126 Sum_probs=47.1
Q ss_pred EeeeeccCCcEEEEEEEEeC--------CceEEEEEEecccCCHHHHHHHHHHHHHHHhCC-CCceeeEeceeecCCceE
Q 003963 509 IGEQIGQGSCGTVYHAVWYG--------SQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLR-HPNVLLFMGAVTSPQRLC 579 (783)
Q Consensus 509 i~~~LG~G~fG~Vy~a~~~~--------~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~-HpnIv~l~~~~~~~~~~~ 579 (783)
-++.|..|-...+|++.... ++.|++|+..... . ..-...+|..+++.|. +.-..++++.+. -+
T Consensus 74 ~v~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlRi~g~~t--~-~~idR~~E~~~l~~L~~~gi~P~l~~~~~----~~ 146 (424)
T 3mes_A 74 EVKQIFSGLTNQLFVVSIVNESMSLSLKHPRILFRIYGKHV--G-KFYDSKVELDVFRYLSNINIAPNIIADFP----EG 146 (424)
T ss_dssp EEEEECCCSSSEEEEEEECCC-----CCCSEEEEEECCCCC----CCCCHHHHHHHHHHHHHTTSSCCEEEEET----TE
T ss_pred EEEEcCCCcccceEEEEeCCCcccccCCCCeEEEEECCCCc--c-hhcCHHHHHHHHHHHHhcCCCCCEEEEcC----CC
Confidence 34667778899999998652 4679999864321 1 0111246788887774 322455665432 37
Q ss_pred EEEEecCCCC
Q 003963 580 IVTEFLPRGS 589 (783)
Q Consensus 580 lV~E~~~ggs 589 (783)
+||||++|..
T Consensus 147 ~I~efI~G~~ 156 (424)
T 3mes_A 147 RIEEFIDGEP 156 (424)
T ss_dssp EEEECCCSEE
T ss_pred EEEEEeCCcc
Confidence 8999998854
No 352
>3g15_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics CONS SGC, hemicholinium-3, transferase; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=91.13 E-value=0.11 Score=57.12 Aligned_cols=29 Identities=24% Similarity=0.394 Sum_probs=24.8
Q ss_pred EEecCCCCCCEEE------cCCCcEEEEecCCCcc
Q 003963 627 IIHRDLKSSNLLV------DKHWTVKVGDFGLSRL 655 (783)
Q Consensus 627 IvHrDIKp~NILl------~~~~~vkL~DFGla~~ 655 (783)
++|+|+.+.|||+ +++..++++||.+|..
T Consensus 246 fcHnDl~~gNil~~~~~~~~~~~~l~vIDwEya~~ 280 (401)
T 3g15_A 246 FCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSY 280 (401)
T ss_dssp EECSCCCGGGEEEETTGGGCSSCCEEECCCTTCEE
T ss_pred eEEecCCCCeEEEecCcccCcCCeEEEechHhccC
Confidence 6799999999999 3456799999998864
No 353
>2ool_A Sensor protein; bacteriophytochrome, photoconversion, photoreceptor, biliver signaling protein; HET: LBV; 2.20A {Rhodopseudomonas palustris} SCOP: d.110.2.1 d.110.3.9
Probab=90.64 E-value=0.31 Score=52.12 Aligned_cols=75 Identities=16% Similarity=0.097 Sum_probs=49.5
Q ss_pred eEEEcC-CCcEEEecHHHHHHcCCChhhHcCCCccccccccccchHHHHHHHHHHhCCe---EEEEEEEEcC-CCCEEEE
Q 003963 143 VHIFDL-SDRIIYWNRSAELLYGYSAEEALGQDAIELLTDGRDFDVAYDIVHRIKMGER---WTGQFPAKTK-TEERVLV 217 (783)
Q Consensus 143 I~i~D~-~G~Ii~~N~aae~L~Gys~eEllG~~~~~l~~~~~~~~~~~~l~~~l~~g~~---~~~e~~~~~k-dG~~~~v 217 (783)
++++|. +++|+.+|..+++++|++.++++|+++.+++++.. ...+...+..+.. ....+..... +|..||+
T Consensus 45 Ll~~~~~~~~i~~~S~N~~~~lg~~~~~llG~~l~~ll~~~~----~~~l~~~l~~~~~~~~~p~~~~~~~~~~~~~f~~ 120 (337)
T 2ool_A 45 LFVVSETDLRIASVSANVEDLLRQPPASLLNVPIAHYLTAAS----AARLTHALHGGDPAAINPIRLDVVTPDGERAFNG 120 (337)
T ss_dssp EEEECTTTCBEEEEETTHHHHHSSCGGGGTTCBGGGGBCHHH----HHHHHHHHCC----CCCSEEEEEEETTEEEEEEE
T ss_pred EEEEECCCCEEEEEehhHHHHHCcCHHHHcCCCHHHHcCHHH----HHHHHHHHhcCCccccCcEEEEEeccCCCeEEEE
Confidence 345676 48999999999999999999999999999987654 2234444443321 1223333333 4566776
Q ss_pred EEEE
Q 003963 218 VATN 221 (783)
Q Consensus 218 ~~~~ 221 (783)
.++.
T Consensus 121 ~~Hr 124 (337)
T 2ool_A 121 ILHR 124 (337)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 6554
No 354
>4dah_A Sporulation kinase D; alpha-beta-alpha structure, structural genomics, midwest CEN structural genomics (MCSG), PSI-biology, PAS-like fold; 2.03A {Bacillus subtilis} PDB: 4dbj_A 4dbi_A 4dak_A 3fos_A
Probab=90.53 E-value=2 Score=41.98 Aligned_cols=95 Identities=4% Similarity=-0.004 Sum_probs=60.2
Q ss_pred HHHHHHHHhCc--ceEEEcCCCcEEEecHHHHHHcCCChhhHcCCCccccccccccchHHHHHHHHHHhCCeEEEEEEEE
Q 003963 131 QYLNILQSMGQ--SVHIFDLSDRIIYWNRSAELLYGYSAEEALGQDAIELLTDGRDFDVAYDIVHRIKMGERWTGQFPAK 208 (783)
Q Consensus 131 ~~~~ile~~~d--~I~i~D~~G~Ii~~N~aae~L~Gys~eEllG~~~~~l~~~~~~~~~~~~l~~~l~~g~~~~~e~~~~ 208 (783)
.++.+++..+. .|+++|.+|+++..... ...+.+ ......+..++..|+....+...-
T Consensus 59 ~L~~~~~~~~~~~~i~i~d~~G~~~~~~~~----------~~~~~~----------~~~r~~f~~a~~~~~~~is~~~~~ 118 (217)
T 4dah_A 59 ILEKTFDSEPRFSGLYFLNAKGDVTASTTE----------LKTKVN----------LADRSFFIKAKETKKTVISDSYSS 118 (217)
T ss_dssp HHHHHHTTCTTEEEEEEEETTCBEEEESSC----------CSSCCB----------CTTSHHHHHHHHHCSCEECCCEEC
T ss_pred HHHHHHhcCCcccEEEEECCCCcEEEecCC----------CCCCCC----------cchhHHHHHHHhcCCcEEeceEEc
Confidence 34555544443 68889999999876530 001111 111123455667677655444444
Q ss_pred cCCCCEEEEEEEEEEEECCCCCEEEEEEEEEehHHHHHH
Q 003963 209 TKTEERVLVVATNTPFYDDDGTLVGIVCVSTDSRPFQET 247 (783)
Q Consensus 209 ~kdG~~~~v~~~~~Pi~d~~G~v~g~v~i~rDITerk~~ 247 (783)
...|. ++.....||++.+|+++|++++.-++....+.
T Consensus 119 ~~~g~--~~i~ia~pi~~~~g~~~Gvl~~~i~l~~l~~~ 155 (217)
T 4dah_A 119 RITGQ--PIFTICVPVLDSKRNVTDYLVAAIQIDYLKNL 155 (217)
T ss_dssp TTTCS--EEEEEEEEEECTTSCEEEEEEEEEEHHHHHHH
T ss_pred CCCCC--EEEEEEEEEECCCCCEEEEEEEEEcHHHHHHH
Confidence 45666 55667789999899999999999998876654
No 355
>1p0z_A Sensor kinase CITA; transferase; HET: FLC MO7; 1.60A {Klebsiella pneumoniae} SCOP: d.110.6.1 PDB: 2v9a_A 2j80_A*
Probab=84.80 E-value=7.7 Score=34.80 Aligned_cols=86 Identities=16% Similarity=0.195 Sum_probs=49.6
Q ss_pred HHHHHHHhC-cceEEEcCCCcEEEecHHHHHHcCCChhhHcCCCccccccccccchHHHHHHHHHHhCCeEEEEEEEEcC
Q 003963 132 YLNILQSMG-QSVHIFDLSDRIIYWNRSAELLYGYSAEEALGQDAIELLTDGRDFDVAYDIVHRIKMGERWTGQFPAKTK 210 (783)
Q Consensus 132 ~~~ile~~~-d~I~i~D~~G~Ii~~N~aae~L~Gys~eEllG~~~~~l~~~~~~~~~~~~l~~~l~~g~~~~~e~~~~~k 210 (783)
++.+-+... +-|+++|.+|.+++... .+.+|+++.. ... +..++ .|+.+.... ...
T Consensus 41 ~~~~~~~~~~~~i~v~d~~G~~~a~~~----------~~~iG~~~~~----~~~------~~~al-~G~~~~~~~--~g~ 97 (131)
T 1p0z_A 41 IDPMRSFSDATYITVGDASGQRLYHVN----------PDEIGKSMEG----GDS------DEALI-NAKSYVSVR--KGS 97 (131)
T ss_dssp HHHHHHHSCCSEEEEEETTSBEEECSS----------GGGTTSBCCS----SCC------HHHHH-HCCCEEEEE--EET
T ss_pred HHHHHHhcCCCEEEEEcCCCcEEEecC----------hhhCCCcccC----CCc------HHHHh-CCCeEEEEE--Ecc
Confidence 344333332 47888999998876432 3447775431 111 23445 455544322 122
Q ss_pred CCCEEEEEEEEEEEECCCCCEEEEEEEEEehHH
Q 003963 211 TEERVLVVATNTPFYDDDGTLVGIVCVSTDSRP 243 (783)
Q Consensus 211 dG~~~~v~~~~~Pi~d~~G~v~g~v~i~rDITe 243 (783)
.| +......||++++|+++|++.+-.++..
T Consensus 98 ~g---~~~~~~~PV~~~~g~viGvv~vg~~l~~ 127 (131)
T 1p0z_A 98 LG---SSLRGKSPIQDATGKVIGIVSVGYTIEQ 127 (131)
T ss_dssp TE---EEEEEEEEEECTTCCEEEEEEEEEEGGG
T ss_pred ce---eeEEEEEeEECCCCCEEEEEEEEEEhHH
Confidence 22 2333445999889999999999888753
No 356
>4ann_A ESSB; membrane protein, membrane secretion, ESS type VII secretion virulence; 1.05A {Staphylococcus aureus subsp}
Probab=79.83 E-value=2.9 Score=41.50 Aligned_cols=117 Identities=13% Similarity=0.093 Sum_probs=77.4
Q ss_pred CCCCceeeEeceeecCCceEEEEEecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCEEE
Q 003963 560 LRHPNVLLFMGAVTSPQRLCIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLV 639 (783)
Q Consensus 560 l~HpnIv~l~~~~~~~~~~~lV~E~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NILl 639 (783)
..||+++.. .+-+..+.+.+.++.-+.+.=+..++ ..+....+.++.+|+....+++. =+|--|.|+||++
T Consensus 42 ~~~~~Fl~~-~I~e~eD~v~~~y~~~~~~~~f~~ik----~~~~~eKlr~l~ni~~l~~~~~~----r~tf~L~P~NL~f 112 (215)
T 4ann_A 42 QHSPYFIDA-ELTELRDSFQIHYDINDNHTPFDNIK----SFTKNEKLRYLLNIKNLEEVNRT----RYTFVLAPDELFF 112 (215)
T ss_dssp SCCTTBCCE-EEEECSSEEEEEECCCTTSEEGGGGG----GSCHHHHHHHHHHGGGGGGGGGS----SEECCCSGGGEEE
T ss_pred ccCCcccce-EEEEcccEEEEEEEcCcccCCHHHHH----hcCHHHHHHHHHHHHHHHHHhcC----ceEEEEecceEEE
Confidence 357888866 45566676666666654322222233 36677888888898887755543 3788899999999
Q ss_pred cCCCcEEEEecCCCcccccccccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCC
Q 003963 640 DKHWTVKVGDFGLSRLKHETYLTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWD 707 (783)
Q Consensus 640 ~~~~~vkL~DFGla~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~elltG~~Pf~ 707 (783)
+.++.+++.-.|+-... +|. ..+...=+-.+=|++..+++++..|.
T Consensus 113 ~~~~~p~i~~RGik~~l-----------------~P~-----~~~ee~fL~qyKAliiall~~K~~Fe 158 (215)
T 4ann_A 113 TRDGLPIAKTRGLQNVV-----------------DPL-----PVSEAEFLTRYKALVICAFNEKQSFD 158 (215)
T ss_dssp CTTSCEEESCCEETTTB-----------------SCC-----CCCHHHHHHHHHHHHHHHHCTTCCHH
T ss_pred cCCCCEEEEEccCccCC-----------------CCC-----CCCHHHHHHHHHHHHHHHHcCCCCHH
Confidence 99999998766643211 111 12223334457789999999998874
No 357
>3by8_A Sensor protein DCUS; histidine kinase sensor domain, inner membrane, membrane, phosphoprotein, transferase, transmembrane; 1.45A {Escherichia coli} SCOP: d.110.6.1 PDB: 1ojg_A
Probab=79.74 E-value=8.4 Score=35.15 Aligned_cols=90 Identities=14% Similarity=0.207 Sum_probs=53.2
Q ss_pred HHHHHHHHHhC-cceEEEcCCCcEEEecHHHHHHcCCChhhHcCCCccccccccccchHHHHHHHHHHhCCeEEEEEEEE
Q 003963 130 RQYLNILQSMG-QSVHIFDLSDRIIYWNRSAELLYGYSAEEALGQDAIELLTDGRDFDVAYDIVHRIKMGERWTGQFPAK 208 (783)
Q Consensus 130 ~~~~~ile~~~-d~I~i~D~~G~Ii~~N~aae~L~Gys~eEllG~~~~~l~~~~~~~~~~~~l~~~l~~g~~~~~e~~~~ 208 (783)
.+++.+-+... +-|+++|.+|.+++... .+.+|+++.. +. +..++ .|+.+... ..
T Consensus 45 ~~~~~~~~~~~~~~i~v~d~~G~~~~~~~----------~~~iG~~~~~---~~--------~~~al-~G~~~~~~--~~ 100 (142)
T 3by8_A 45 AIAEAVRKRNDLLFIVVTDMQSLRYSHPE----------AQRIGQPFKG---DD--------ILKAL-NGEENVAI--NR 100 (142)
T ss_dssp HHHHHHHHHTTCSEEEEEETTCBBSCCSS----------GGGTTSBCCC---GG--------GTGGG-GTCCEEEE--EC
T ss_pred HHHHHHHhhcCCcEEEEECCCCcEEECCC----------hHHCCCcCCC---CC--------HHHHh-CCCeEEEE--ec
Confidence 44555554443 47788999998765432 3467776531 11 12233 45544332 12
Q ss_pred cCCCCEEEEEEEEEEEECCCCCEEEEEEEEEehHHHHH
Q 003963 209 TKTEERVLVVATNTPFYDDDGTLVGIVCVSTDSRPFQE 246 (783)
Q Consensus 209 ~kdG~~~~v~~~~~Pi~d~~G~v~g~v~i~rDITerk~ 246 (783)
...|.. .....||++++|+++|++.+-.++.....
T Consensus 101 ~~~g~~---~~~~~PV~~~~g~viGvv~vg~~~~~~~~ 135 (142)
T 3by8_A 101 GFLAQA---LRVFTPIYDENHKQIGVVAIGLELSRVTQ 135 (142)
T ss_dssp SSSSCE---EEEEEEEECTTSCEEEEEEEEEEHHHHHH
T ss_pred CccEEE---EEEEEeEEcCCCCEEEEEEEeEEHHHHHH
Confidence 223332 23345999888999999999999876543
No 358
>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A
Probab=78.99 E-value=0.15 Score=57.12 Aligned_cols=62 Identities=16% Similarity=0.143 Sum_probs=17.1
Q ss_pred eEeeeeccCCcEEEEEEEEeCC-ceEEE------EEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEecee
Q 003963 508 TIGEQIGQGSCGTVYHAVWYGS-QDVAV------KVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAV 572 (783)
Q Consensus 508 ~i~~~LG~G~fG~Vy~a~~~~~-~~vAi------K~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~ 572 (783)
.+.++|| ||.||++.+... .+||+ |.........+....+.+|..+++.++|||+++.+.+.
T Consensus 145 ~l~~~lG---fG~v~~g~~~~~~~~Vav~~~~~~K~~~~~~~~~e~~~~~~rea~l~~~~~H~niv~~h~f~ 213 (463)
T 3cxl_A 145 PIYEHVG---YTTLNREPAYKKHMPVLKETHDERDSTGQDGVSEKRLTSLVRRATLKENEQIPKYEKIHNFK 213 (463)
T ss_dssp CSTTTSS---BCCC---------CCBGGGC-----------------------------------CBCCCEE
T ss_pred cccccCC---chhhhcccccccCCchhhhhccCccccccccccccccccccccccccccccccccCCCcceE
Confidence 3456676 999999987653 57888 76655555555566788899999999999999988764
No 359
>3lif_A Putative diguanylate cyclase (ggdef) with PAS/PAC; PDC fold, signaling protein; HET: CIT; 2.70A {Rhodopseudomonas palustris}
Probab=78.66 E-value=19 Score=35.51 Aligned_cols=95 Identities=13% Similarity=0.105 Sum_probs=57.5
Q ss_pred HHHHHHHHHhCc--ceEEEcCCCcEEEecHHHHHHcCCChhhHcCCCccccccccccchHHHHHHHHHH--hCCeEEEEE
Q 003963 130 RQYLNILQSMGQ--SVHIFDLSDRIIYWNRSAELLYGYSAEEALGQDAIELLTDGRDFDVAYDIVHRIK--MGERWTGQF 205 (783)
Q Consensus 130 ~~~~~ile~~~d--~I~i~D~~G~Ii~~N~aae~L~Gys~eEllG~~~~~l~~~~~~~~~~~~l~~~l~--~g~~~~~e~ 205 (783)
+.++.++...+. .|+++|.+|+ +..... .. ..+.+ ......+..++. .++.+..+.
T Consensus 58 ~~L~~~~~~~~~~~~i~i~d~~G~-~~~s~~------~~---~~~~~----------~~~r~~f~~a~~~~~~~~~is~p 117 (254)
T 3lif_A 58 ERLRALADNLPQLSDVAILDADGQ-LTYASV------KP---VPALD----------NSDRSYFRYHRANDDHTLLITGP 117 (254)
T ss_dssp HHHHHHHHHCTTEEEEEEECTTSB-EEEESS------SS---EECCB----------CTTSHHHHHHHHCCCCCCEEEEE
T ss_pred HHHHHHHhcCCccceEEEECCCCC-EecCCC------CC---CCCCC----------cccHHHHHHHHhCCCCCeEECCc
Confidence 556667776664 6889999999 543321 00 01111 111123455565 455555444
Q ss_pred EEEcCCCCEEEEEEEEEEEECCCCCEEEEEEEEEehHHHHH
Q 003963 206 PAKTKTEERVLVVATNTPFYDDDGTLVGIVCVSTDSRPFQE 246 (783)
Q Consensus 206 ~~~~kdG~~~~v~~~~~Pi~d~~G~v~g~v~i~rDITerk~ 246 (783)
..-...|. |+.....||++.+|++.|++++..++....+
T Consensus 118 ~~~~~~g~--~~i~~~~pi~~~~g~~~Gvl~~~i~l~~l~~ 156 (254)
T 3lif_A 118 IQSRTSGV--WVFVVSRRLETTDGKFFGVVVATIESEYFST 156 (254)
T ss_dssp EECTTTCC--EEEEEEEEEECTTCCEEEEEEEEECHHHHHH
T ss_pred eecCCCCc--EEEEEEeeeeCCCCCEeEEEEEEECHHHHHH
Confidence 44344554 5566778999989999999999999865443
No 360
>4e04_A Bacteriophytochrome (light-regulated signal trans histidine kinase), PHYB1; bacteriophytochrome chromophore binding domain; HET: LBV; 1.79A {Rhodopseudomonas palustris}
Probab=75.45 E-value=5.8 Score=41.94 Aligned_cols=54 Identities=9% Similarity=0.090 Sum_probs=42.0
Q ss_pred ceEEEcCCCcEEEecHHHHHHcCCChhhHcCCCccccccccccchHHHHHHHHHHhCC
Q 003963 142 SVHIFDLSDRIIYWNRSAELLYGYSAEEALGQDAIELLTDGRDFDVAYDIVHRIKMGE 199 (783)
Q Consensus 142 ~I~i~D~~G~Ii~~N~aae~L~Gys~eEllG~~~~~l~~~~~~~~~~~~l~~~l~~g~ 199 (783)
.++++|.+++|+.+...+..++|.+.++++|+++..++.+.. ...+...+....
T Consensus 31 ~Ll~~~~~~~I~~~S~N~~~~lg~~~~~~lG~~l~~ll~~~~----~~~l~~~l~~~~ 84 (327)
T 4e04_A 31 LLLALAADMTIVAGSDNLPELTGLAIGALIGRSAADVFDSET----HNRLTIALAEPG 84 (327)
T ss_dssp EEEEECTTCBEEEEETTHHHHHSCCHHHHTTCBHHHHBCHHH----HHHHHHHHHSCS
T ss_pred EEEEEcCCCeEEEEcccHHHHhCCChHhhcCCCHHHHcCHHH----HHHHHHHhhccc
Confidence 355688889999999999999999999999999999986543 233445555433
No 361
>4ew7_A Conjugative transfer: regulation; alpha-beta-alpha structure, structural genomics, midwest CEN structural genomics (MCSG), PSI-biology; 1.67A {Salmonella enterica subsp}
Probab=70.52 E-value=34 Score=29.40 Aligned_cols=88 Identities=15% Similarity=0.110 Sum_probs=52.0
Q ss_pred HHHHHHHhCcceEEEcCCCcEEEecHHHHHHcCCChhhHcCCCccccccccccchHHHHH---HHHHHhCCeEEEEEEEE
Q 003963 132 YLNILQSMGQSVHIFDLSDRIIYWNRSAELLYGYSAEEALGQDAIELLTDGRDFDVAYDI---VHRIKMGERWTGQFPAK 208 (783)
Q Consensus 132 ~~~ile~~~d~I~i~D~~G~Ii~~N~aae~L~Gys~eEllG~~~~~l~~~~~~~~~~~~l---~~~l~~g~~~~~e~~~~ 208 (783)
.+.|..+.|.+|.+-+...+|+|+|-+|++||--...-+-|...... .- .-....+ .+.+-.|-..... .
T Consensus 22 iq~iY~nSPVpVCVRNq~RkilYaN~aF~elF~Ked~~~sg~S~~~~-~v---E~~LS~LELeCqsLGhG~af~r~---F 94 (127)
T 4ew7_A 22 IQDIYKNSPVPVCVRNQSRKIIYANGAFIELFSKEDQPLSGDSYNRY-GV---EVFLSSLELECQSLGHGAAFCRR---F 94 (127)
T ss_dssp HHHHHTTCSSCEEEECTTSCEEEECHHHHHHTTSCCCGGGCTTSSHH-HH---HHHHHHHHHHHHHHCTTCEEEEE---E
T ss_pred HHhhhcCCCccEEEecccceEEEecchHHHHhhcccCcccCccccee-ee---hhhHHHHHHHHHhhcCCceEEEE---e
Confidence 36678899999999999999999999999996533322333221100 00 0011111 2334444444433 3
Q ss_pred cCCCCEEEEEEEEEEEEC
Q 003963 209 TKTEERVLVVATNTPFYD 226 (783)
Q Consensus 209 ~kdG~~~~v~~~~~Pi~d 226 (783)
.-.|+.+.+.+-...+.+
T Consensus 95 n~~~e~yQIRmE~iSf~~ 112 (127)
T 4ew7_A 95 NFHGEIYQIRMENISFDN 112 (127)
T ss_dssp EETTEEEEEEEEEEECTT
T ss_pred ecCCceEEEEEEEeeecC
Confidence 446778877777666544
No 362
>4ano_A ESSB; membrane protein, membrane secretion, ESS type V secretion S; HET: MSE; 1.70A {Geobacillus thermodenitrificans ng80-2organism_taxid}
Probab=66.86 E-value=5.7 Score=39.49 Aligned_cols=115 Identities=14% Similarity=0.129 Sum_probs=75.8
Q ss_pred CCCceeeEeceeecCCceEEEEEecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHH-HHHhCCCCEEecCCCCCCEEE
Q 003963 561 RHPNVLLFMGAVTSPQRLCIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVS-YLHHCNPPIIHRDLKSSNLLV 639 (783)
Q Consensus 561 ~HpnIv~l~~~~~~~~~~~lV~E~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~-~LH~~~~~IvHrDIKp~NILl 639 (783)
.||++ -..+-..++.+.+.++.-+++.=+..++ .++....++++.+|+.... +++. -+|--|.|+||++
T Consensus 48 ~~~~f--~~~I~~~eD~~~i~y~~~~~~~~f~~i~----~~~~~eKlrll~nl~~L~~~~~~~----r~tf~l~P~NL~f 117 (219)
T 4ano_A 48 VDPCI--VRDIDVSEDEVKVVIKPPSSFLTFAAIR----KTTLLSRIRAAIHLVSKVKHHSAR----RLIFIVCPENLMF 117 (219)
T ss_dssp SCSSS--EEEEEECSSEEEEEEECCTTCEEHHHHH----TSCHHHHHHHHHHHHHHHSSCCSS----SEECCCCGGGEEE
T ss_pred cCCCC--CeEEEEeCCEEEEEEEcCcccCcHHHHH----hcCHHHHHHHHHHHHHHHHHhhhC----ceeEEEeCceEEE
Confidence 57877 3334466777777777764443344443 2667788888888887666 4443 4788899999999
Q ss_pred cCCCcEEEEecCCCcccccccccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCC
Q 003963 640 DKHWTVKVGDFGLSRLKHETYLTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWD 707 (783)
Q Consensus 640 ~~~~~vkL~DFGla~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~s~~sDIwSLG~il~elltG~~Pf~ 707 (783)
+.++.++|.-.|+-.. ++|.. .+...=+-.+=|++..++.++..|.
T Consensus 118 ~~~~~p~i~hRGi~~~-----------------lpP~e-----~~ee~fl~qyKali~all~~K~~Fe 163 (219)
T 4ano_A 118 NRALEPFFLHVGVKES-----------------LPPDE-----WDDERLLREVKATVLALTEGEYRFD 163 (219)
T ss_dssp CTTCCEEESCCEETTT-----------------BSSCS-----CCHHHHHHHHHHHHHHHTTCSSCHH
T ss_pred eCCCcEEEEEcCCccc-----------------CCCCC-----CCHHHHHHHHHHHHHHHHcCCCCHH
Confidence 9999999976664321 22221 1222223456788899999988774
No 363
>2w1r_A Spovt, stage V sporulation protein T; regulatory GAF domain of spovt, transcription, transcription regulation, repressor, activator; 1.50A {Bacillus subtilis}
Probab=65.44 E-value=50 Score=29.23 Aligned_cols=88 Identities=18% Similarity=0.165 Sum_probs=56.6
Q ss_pred HHHHHHHHHhCcceEEEcCCCcEEEecHHHHHHcCCChhhHcCCCccccccccccchHHHHHHHHHHhCCeEEE----EE
Q 003963 130 RQYLNILQSMGQSVHIFDLSDRIIYWNRSAELLYGYSAEEALGQDAIELLTDGRDFDVAYDIVHRIKMGERWTG----QF 205 (783)
Q Consensus 130 ~~~~~ile~~~d~I~i~D~~G~Ii~~N~aae~L~Gys~eEllG~~~~~l~~~~~~~~~~~~l~~~l~~g~~~~~----e~ 205 (783)
+..+.|.+.+..+|.|+|.+..|-++ |...++.+++++. ..+.+++++|+.... ..
T Consensus 6 ~~AeiI~~~~~~aV~ItD~~~ilA~~--------G~g~~~~~~~~is------------~~~~~~i~~~k~~~~~~~~~~ 65 (123)
T 2w1r_A 6 EYADALYDSLGHSVLICDRDVYIAVS--------GSSKKDYLNKSIS------------EMLERTMDQRSSVLESDAKSV 65 (123)
T ss_dssp HHHHHHHHHHCSEEEEECSSBEEEEE--------SSCHHHHBTCBBC------------HHHHHHHHHCSCEEESSCEEE
T ss_pred HHHHHHHHHHCCeEEEEcCccEEEEE--------ecChhhcCCCccC------------HHHHHHHHcCCEEEEcCCccc
Confidence 55688889999999999999887764 5555555654331 125668888887433 11
Q ss_pred EEEcCCCCEEEEEEEEEEEECCCCCEEEEEEEEE
Q 003963 206 PAKTKTEERVLVVATNTPFYDDDGTLVGIVCVST 239 (783)
Q Consensus 206 ~~~~kdG~~~~v~~~~~Pi~d~~G~v~g~v~i~r 239 (783)
......+.. .-...+.||+ .+|+++|++.++.
T Consensus 66 ~~~~~~~~~-~~s~ii~PI~-~~g~viG~i~l~~ 97 (123)
T 2w1r_A 66 QLVNGIDED-MNSYTVGPIV-ANGDPIGAVVIFS 97 (123)
T ss_dssp ESBTTCEEE-ESEEEEEEEE-ETTEEEEEEEEEE
T ss_pred cccCCCCCC-eeEEEEEEEE-ECCEEEEEEEEEE
Confidence 111112222 2345678998 5779999998883
No 364
>1dip_A Delta-sleep-inducing peptide immunoreactive peptide; structure, leucine zipper, PIG, acetylation; NMR {Sus scrofa} SCOP: h.1.12.1
Probab=62.98 E-value=22 Score=28.47 Aligned_cols=33 Identities=27% Similarity=0.246 Sum_probs=26.8
Q ss_pred CCChHHHHHHHHHHHHhhHHHHHHHhhhccccC
Q 003963 4 NTGPAEELLRKIQELEAGQEHLKQELSKLKISN 36 (783)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 36 (783)
--+-.++|-++|.||++...+|.+|=+-|+--.
T Consensus 13 VREEVevLKe~I~EL~e~~~qLE~EN~~Lk~~a 45 (78)
T 1dip_A 13 VREEVEILKEQIRELVEKNSQLERENTLLKTLA 45 (78)
T ss_dssp CTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 344567889999999999999999988887655
No 365
>3ra3_B P2F; coiled coil domain, fiber, KIH interactions, synthetic biolo helical reconstruction, de novo protein; HET: PHI; 2.31A {Synthetic}
Probab=62.42 E-value=2.9 Score=25.90 Aligned_cols=20 Identities=40% Similarity=0.609 Sum_probs=15.1
Q ss_pred HHHHHHhhHHHHHHHhhhcc
Q 003963 14 KIQELEAGQEHLKQELSKLK 33 (783)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~ 33 (783)
||++|...-++||||+..|.
T Consensus 1 kirrlkqknarlkqeiaale 20 (28)
T 3ra3_B 1 KIRRLKQKNARLKQEIAALE 20 (28)
T ss_dssp --CHHHHHHHHHHHHHHHHH
T ss_pred ChhHHHHhhhHHHHHHHHHH
Confidence 68889999999999987653
No 366
>2ykf_A Pdtas, probable sensor histidine kinase pdtas; transferase, two-component system, GAF domain, PAS domain; 2.00A {Mycobacterium tuberculosis} PDB: 2ykh_A
Probab=64.59 E-value=1.8 Score=45.38 Aligned_cols=68 Identities=7% Similarity=-0.009 Sum_probs=46.2
Q ss_pred ChhhHcCCCccccccccccchHHHHHHHHHHhCCeEEEEEEEE----cCCCCEEEEEEEEEEEECCCCCEEEEEEEEE-e
Q 003963 166 SAEEALGQDAIELLTDGRDFDVAYDIVHRIKMGERWTGQFPAK----TKTEERVLVVATNTPFYDDDGTLVGIVCVST-D 240 (783)
Q Consensus 166 s~eEllG~~~~~l~~~~~~~~~~~~l~~~l~~g~~~~~e~~~~----~kdG~~~~v~~~~~Pi~d~~G~v~g~v~i~r-D 240 (783)
-.++++|+.+.....+ .+.+++++|+......... ...| +..++.||++ +|+++|++.+.+ |
T Consensus 68 ~~~dvvG~~~~~~~~~--------~v~~~~~~g~~~~~~~~~~~~~~~~~~----v~~~~~Pi~~-~g~vigvl~~~~~d 134 (305)
T 2ykf_A 68 VHTDAVGTVVAANSMP--------LVAATFSGGVPGREGAVGQQNSCQHDG----HSVEVSPVRF-GDQVVAVLTRHQPE 134 (305)
Confidence 3568899877655443 2567788887643322110 1222 6788999997 789999999999 9
Q ss_pred hHHHHH
Q 003963 241 SRPFQE 246 (783)
Q Consensus 241 ITerk~ 246 (783)
||+...
T Consensus 135 i~~~~~ 140 (305)
T 2ykf_A 135 LAARRR 140 (305)
Confidence 998743
No 367
>3c8c_A Methyl-accepting chemotaxis protein; structural genomics, unknown function, uncharacterized protein; 1.50A {Vibrio cholerae o1 biovar eltor str}
Probab=58.35 E-value=44 Score=31.99 Aligned_cols=53 Identities=17% Similarity=0.226 Sum_probs=33.4
Q ss_pred HHHHHHhCCeEEEEEEEEcCCCCEEEEEEEEEEEECCC-CCEEEEEEEEEehHHHH
Q 003963 191 IVHRIKMGERWTGQFPAKTKTEERVLVVATNTPFYDDD-GTLVGIVCVSTDSRPFQ 245 (783)
Q Consensus 191 l~~~l~~g~~~~~e~~~~~kdG~~~~v~~~~~Pi~d~~-G~v~g~v~i~rDITerk 245 (783)
+..++..++....+.......|. ++...+.||++.+ |+++|++++.-++....
T Consensus 95 ~~~~~~~~~~~~s~~~~~~~~~~--~~i~~~~pi~~~~~g~~~Gvl~~~i~~~~l~ 148 (240)
T 3c8c_A 95 YKDAKNAGKLVITAPYADSASGE--ILVSVATPVKDSATGQFLGSIFYDVSLAELA 148 (240)
T ss_dssp HHHHHHHTSCEECCCEECTTTCC--EEEEEEEEEECTTTCCEEEEEEEEECHHHHH
T ss_pred HHHHHhcCCcEEeeceEcCCCCe--EEEEEEEEEEECCCCeEEEEEEEEEEHHHHH
Confidence 44555556553333222233555 4556678999865 99999998888876544
No 368
>4fpp_A Phosphotransferase; four helix bundle, bergerat fold, CCKA, CTRA, CPDR, bacterial cytoplasme; 2.20A {Caulobacter crescentus} PDB: 4fmt_A
Probab=53.81 E-value=3 Score=42.02 Aligned_cols=65 Identities=12% Similarity=0.074 Sum_probs=15.6
Q ss_pred CCEEEEEEEEEEEECCCCCEEEEEEEEEehHHHHHHHHHHHHhhccccccccCCchhHHHHhhcCCchhHHHHHHH
Q 003963 212 EERVLVVATNTPFYDDDGTLVGIVCVSTDSRPFQETRAALWDTKNSDTDSNINRPRNTVTAKLGLDSQQPLQATIA 287 (783)
Q Consensus 212 G~~~~v~~~~~Pi~d~~G~v~g~v~i~rDITerk~~E~~L~~~~~~~~~~~~~~~~~~l~~~l~~d~~qpl~~~i~ 287 (783)
|..+++....+-+. ..|.....+..++|+|.++..+..++... .+ .=|.+.++||+++||.++..
T Consensus 2 g~~~~~~~~s~gl~-P~g~~~~~~~~~~e~~~~~~~e~~~~~~~----la------allas~IaHELrtPL~~I~~ 66 (247)
T 4fpp_A 2 GSSHHHHHHSSGLV-PRGSHNQMTETVTETTAPASPEADVQGPD----FA------AMLAARLCHDFISPASAIVS 66 (247)
T ss_dssp ------------------------------------------CH----HH------HHHHHHHHHHHHHHHHHHHH
T ss_pred CccccccccccCCC-cCCcHHHHHHHHHHHHHHHHHHHHhhHHH----HH------HHHHhccCHHHhHHHHHHHH
Confidence 33444555444444 34555567778899998877666553221 11 11567899999999987554
No 369
>1cja_A Protein (actin-fragmin kinase); transferase; HET: AMP; 2.90A {Physarum polycephalum} SCOP: d.144.1.3
Probab=53.79 E-value=78 Score=33.37 Aligned_cols=140 Identities=14% Similarity=0.103 Sum_probs=75.1
Q ss_pred eeEeeeeccCCcEEEEEEEEeCCceEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCceeeEece-------------ee
Q 003963 507 LTIGEQIGQGSCGTVYHAVWYGSQDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGA-------------VT 573 (783)
Q Consensus 507 y~i~~~LG~G~fG~Vy~a~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~-------------~~ 573 (783)
++.++..-.|..|.++... ++..|+||-. . .-..+.+-.++...-.+.-|+..-+... +.
T Consensus 71 v~~I~~s~~Gstgvff~~t--d~~~~VVK~s--~---~l~~E~l~s~LA~~LGlpiP~~Riv~~~~~E~~e~~~~L~~~~ 143 (342)
T 1cja_A 71 FKGIERSEKGTEGLFFVET--ESGVFIVKRS--T---NIESETFCSLLCMRLGLHAPKVRVVSSNSEEGTNMLECLAAID 143 (342)
T ss_dssp EEEEEECCSTTSCEEEEEE--SSCEEEEECC--T---THHHHHHHHHHHHHHTCCCCCEEEEESSSHHHHHHHHHHHHHC
T ss_pred eeEEEeccCCCCCeEEEEe--CCCEEEEeCc--H---HHHHHHHHHHHHHHhCCCCCCeeEEeeCcHHHHHHHHHHHHhh
Confidence 7778888888766555544 3557899843 1 2233444555555556677764333211 00
Q ss_pred ---------cCCceEEEEEecCCCCHHHHHhhc-CCcchHHHHHHHHHHHHHHHHHHHhCCCCE--Ee-cCCCCCCEEEc
Q 003963 574 ---------SPQRLCIVTEFLPRGSLFRLLQRN-TTKLDWRRRILMALDIARGVSYLHHCNPPI--IH-RDLKSSNLLVD 640 (783)
Q Consensus 574 ---------~~~~~~lV~E~~~ggsL~~~L~~~-~~~l~~~~~~~i~~qi~~aL~~LH~~~~~I--vH-rDIKp~NILl~ 640 (783)
..+..+++|+|++|..|.+.-... ...+..+....+. -+-++..+..+.-+. +. .--.+.|||++
T Consensus 144 ~~~~~l~~l~~~~~~l~meyv~G~~L~e~~~~~~~~~f~~~~~k~LG--~Ii~FDi~InN~DR~Pl~W~n~GN~~NIL~~ 221 (342)
T 1cja_A 144 KSFRVITTLANQANILLMELVRGITLNKLTTTSAPEVLTKSTMQQLG--SLMALDVIVNNSDRLPIAWTNEGNLDNIMLS 221 (342)
T ss_dssp SSSCHHHHHTTCSEEEEEECCCEEESTTCCSSSHHHHSCHHHHHHHH--HHHHHHHHHTCCSSSCSSSCSCCCGGGEEEE
T ss_pred hhhHHHHHhhcccceehhhhcCCCccccchhhhhhhhcCHHHHHhhc--hhheehhhhcCCccCcccccCCCChhheEEe
Confidence 122466999999876655431110 0112222222221 123455555543111 11 12478899997
Q ss_pred CCC-cEEEEecCCCcc
Q 003963 641 KHW-TVKVGDFGLSRL 655 (783)
Q Consensus 641 ~~~-~vkL~DFGla~~ 655 (783)
.++ .+.++|-+++..
T Consensus 222 ~~n~~~~~IDhn~af~ 237 (342)
T 1cja_A 222 ERGATVVPIDSKIIPL 237 (342)
T ss_dssp SBTTCEEECSCCCCCC
T ss_pred CCCCeEEEEcCCcccc
Confidence 654 488999988754
No 370
>3s7o_A Bacteriophytochrome; biliverdin, PAS, GAF, photoreceptor, fluorescent protein; HET: LBV GOL; 1.24A {Deinococcus radiodurans} PDB: 3s7n_A* 3s7p_A* 3s7q_A* 2o9c_A* 2o9b_A* 1ztu_A*
Probab=48.11 E-value=9.9 Score=40.38 Aligned_cols=40 Identities=20% Similarity=0.211 Sum_probs=35.7
Q ss_pred ceEEEcC-CCcEEEecHHHHHHcCCChhhHcCCCccccccc
Q 003963 142 SVHIFDL-SDRIIYWNRSAELLYGYSAEEALGQDAIELLTD 181 (783)
Q Consensus 142 ~I~i~D~-~G~Ii~~N~aae~L~Gys~eEllG~~~~~l~~~ 181 (783)
.++++|. +++|+.+...+..++|.+.++++|+++.+++.+
T Consensus 54 ~LL~l~~~~~~I~~~S~N~~~~lg~~~~~llG~~l~~ll~~ 94 (343)
T 3s7o_A 54 ALLTADGHSGEVLQMSLNAATFLGQEPTVLRGQTLAALLPE 94 (343)
T ss_dssp EEEEEETTTCBEEEEETTHHHHHSSCHHHHTTCBHHHHSTT
T ss_pred EEEEEECCCCEEEEEcccHHHHhCcChHHHcCCCHHHHHhH
Confidence 3456886 799999999999999999999999999999876
No 371
>2x6h_A GH13170P, VPS34, phosphotidylinositol 3 kinase 59F; transferase; 2.90A {Drosophila melanogaster} PDB: 2x6f_A 2x6i_A* 2x6j_A* 2x6k_A*
Probab=47.05 E-value=79 Score=36.81 Aligned_cols=33 Identities=27% Similarity=0.280 Sum_probs=26.9
Q ss_pred HHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCc
Q 003963 616 GVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSR 654 (783)
Q Consensus 616 aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~ 654 (783)
.+.|+=.. +|=.++||||+.+|++.=+|||.+.
T Consensus 543 vv~YILGl------GDRH~~NILid~tG~v~HIDFG~~f 575 (696)
T 2x6h_A 543 VITYLLGV------GDRHLDNLLLTTNGKLFHIDFGYIL 575 (696)
T ss_dssp HHHHHHTC------CCCCTTTEEECTTSCEEECCCCSCT
T ss_pred HHHHHccC------CCCCCcceEEeCCCCEEEEeehhhh
Confidence 45565433 5889999999999999999999874
No 372
>2gsv_A Hypothetical protein YVFG; alpha-helical protein, structural genomics, PSI, protein structure initiative; 1.90A {Bacillus subtilis} SCOP: a.23.7.1 PDB: 2js1_A
Probab=46.30 E-value=13 Score=29.08 Aligned_cols=26 Identities=31% Similarity=0.470 Sum_probs=19.7
Q ss_pred HHHHHHHHHHHHhhHHHHHHHhhhcc
Q 003963 8 AEELLRKIQELEAGQEHLKQELSKLK 33 (783)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~ 33 (783)
-+.++++||-|++.-...|||-|||.
T Consensus 49 NAvvlkRiqHLdEAY~KVk~e~skle 74 (80)
T 2gsv_A 49 NAVVLKRIQHLDEAYNKVKRGESKLE 74 (80)
T ss_dssp HHHHHHHHHHHHHHHHHHHHC-----
T ss_pred hHHHHHHHHHHHHHHHHHHhhhhhhh
Confidence 47899999999999999999999885
No 373
>3e4o_A C4-dicarboxylate transport sensor protein DCTB; PAS domain, N-TERM helical dimerization domain, transferase; 2.30A {Sinorhizobium meliloti} PDB: 3e4p_A 3e4q_A 2zbb_A
Probab=46.25 E-value=1.1e+02 Score=31.49 Aligned_cols=86 Identities=10% Similarity=0.066 Sum_probs=50.5
Q ss_pred cceEEEcCCCcEEEecHHHHHHcCCChhhHcCCCccccccccccchHHHHHHHHHHhCCeEEEEEEEEcCCCCEEEEEEE
Q 003963 141 QSVHIFDLSDRIIYWNRSAELLYGYSAEEALGQDAIELLTDGRDFDVAYDIVHRIKMGERWTGQFPAKTKTEERVLVVAT 220 (783)
Q Consensus 141 d~I~i~D~~G~Ii~~N~aae~L~Gys~eEllG~~~~~l~~~~~~~~~~~~l~~~l~~g~~~~~e~~~~~kdG~~~~v~~~ 220 (783)
..|+++|.+|+++..+.. -.....+|.+.. ....+.+++..+.... +..-...|. ++...
T Consensus 114 ~~i~v~d~~G~viass~~------~~p~~~~g~d~~----------~R~yf~~Al~g~~~~~--~~~~~~tg~--~~i~~ 173 (305)
T 3e4o_A 114 AVIYLIDRSGVAVAASNW------QEPTSFVGNDYA----------FRDYFRLAVRDGMAEH--FAMGTVSKR--PGLYI 173 (305)
T ss_dssp SEEEEEETTSBEEEETTT------TSTTCCTTCBCT----------TSHHHHHHHHHSEEEE--EEECTTTCC--EEEEE
T ss_pred cEEEEECCCCCEEEeCCC------cCcccccCCCcc----------ccHHHHHHHhcCCcEE--EEEecCCCC--EEEEE
Confidence 468899999999875531 001112333221 1123455666544322 222233444 44566
Q ss_pred EEEEECCCCCEEEEEEEEEehHHHHHH
Q 003963 221 NTPFYDDDGTLVGIVCVSTDSRPFQET 247 (783)
Q Consensus 221 ~~Pi~d~~G~v~g~v~i~rDITerk~~ 247 (783)
..||++ +|+++|++++..|+....+.
T Consensus 174 a~PV~~-~G~viGVv~v~i~l~~l~~~ 199 (305)
T 3e4o_A 174 SRRVDG-PGGPLGVIVAKLEFDGVEAD 199 (305)
T ss_dssp EEEEEE-TTEEEEEEEEEECCHHHHHH
T ss_pred EEEEcc-CCeEEEEEEEEEcHHHHHHH
Confidence 789986 59999999999999876543
No 374
>1deb_A APC protein, adenomatous polyposis coli protein; coiled coil, tumor suppressor, structural protein; 2.40A {Homo sapiens} SCOP: h.1.18.1
Probab=42.05 E-value=27 Score=25.75 Aligned_cols=25 Identities=28% Similarity=0.575 Sum_probs=22.2
Q ss_pred ChHHHHHHHHHHHHhhHHHHHHHhh
Q 003963 6 GPAEELLRKIQELEAGQEHLKQELS 30 (783)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~ 30 (783)
.+-+.|++.++-|..+--||||||+
T Consensus 3 asYdQL~~QVe~Lk~ENshLrrEL~ 27 (54)
T 1deb_A 3 ASYDQLLKQVEALKMENSNLRQELE 27 (54)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHHhhHHHHHHH
Confidence 3567899999999999999999986
No 375
>2wq1_A General control protein GCN4; TAA, nucleus, coiled coil, DNA-binding, protein export, ION coordination, polar core residues; 1.08A {Saccharomyces cerevisiae} PDB: 2wq0_A 2wq2_A 2wq3_A 2wpz_A 2wpy_A 1ij0_A 1ij1_A 1gcm_A 1rb5_A 1rb6_A 1rb1_A 1rb4_A 1swi_A 3k7z_A 1zii_A 1zij_A 1ij2_A 1ij3_A 1zil_A 1zim_A ...
Probab=40.66 E-value=23 Score=23.65 Aligned_cols=23 Identities=17% Similarity=-0.032 Sum_probs=17.7
Q ss_pred ChHHHHHHHHHHHHhhHHHHHHH
Q 003963 6 GPAEELLRKIQELEAGQEHLKQE 28 (783)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~ 28 (783)
.-.|||+.++.+||.+-++|+.=
T Consensus 7 dKVEell~~~~~le~EV~Rl~~l 29 (33)
T 2wq1_A 7 DKIEENTSKIYHNTNEIARNTKL 29 (33)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhhHHHHHHHHHHHHH
Confidence 34678888888888888888753
No 376
>3zq5_A Phytochrome-like protein CPH1; arginine finger, tandem GAF domain, receptor, PAS domain, chromophore, sensory transduction; HET: CYC; 1.95A {Synechocystis SP} PDB: 2vea_A*
Probab=36.93 E-value=16 Score=41.04 Aligned_cols=41 Identities=20% Similarity=0.186 Sum_probs=36.1
Q ss_pred eEEEcC-CCcEEEecHHHHHHcCCChhhHcCCCccccccccc
Q 003963 143 VHIFDL-SDRIIYWNRSAELLYGYSAEEALGQDAIELLTDGR 183 (783)
Q Consensus 143 I~i~D~-~G~Ii~~N~aae~L~Gys~eEllG~~~~~l~~~~~ 183 (783)
++++|. +++|+.+...+..++|.+.++++|+++.+++.+..
T Consensus 32 LLal~~~~~~I~~~S~N~~~~lg~~~~~llG~~l~~ll~~~~ 73 (520)
T 3zq5_A 32 VVVLQEPDLTISQISANCTGILGRSPEDLLGRTLGEVFDSFQ 73 (520)
T ss_dssp EEEEETTTTEEEEEETTHHHHHSCCHHHHTTSBHHHHCEESS
T ss_pred EEEEECCCCEEEEEcccHHHHhCcChHHHcCCCHHHHcCHHH
Confidence 456886 78999999999999999999999999999987653
No 377
>3ls8_A Phosphatidylinositol 3-kinase catalytic subunit type 3; alpha/beta protein, PIK3C3, compound 15E, structural genomics, SGC stockholm; HET: AJZ; 2.25A {Homo sapiens} PDB: 3ihy_A
Probab=36.75 E-value=1.6e+02 Score=33.66 Aligned_cols=44 Identities=23% Similarity=0.128 Sum_probs=30.9
Q ss_pred HHHHHHHHHH--HHHHHHHhCCCCEEecCCCCCCEEEcCCCcEEEEecCCCc
Q 003963 605 RRILMALDIA--RGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSR 654 (783)
Q Consensus 605 ~~~~i~~qi~--~aL~~LH~~~~~IvHrDIKp~NILl~~~~~vkL~DFGla~ 654 (783)
....++..++ ..+-|+=.. +|=.++||||+.+|++.=+|||.+.
T Consensus 456 a~~nF~~S~A~ySvv~YILGi------gDRH~~NILld~tG~v~HIDFG~~f 501 (614)
T 3ls8_A 456 VMDTYVKSCAGYCVITYILGV------GDRHLDNLLLTKTGKLFHIDFGYIL 501 (614)
T ss_dssp HHHHHHHHHHHHHHHHHHHTC------CCCCTTSEEECTTSCEEECCCSSCT
T ss_pred HHHHHHHHHHHHhHhheeeec------cCCCCcceeEcCCCCEeeeehHHhh
Confidence 3344444333 245566443 4888999999999999999999873
No 378
>3lid_A Putative sensory BOX/ggdef family protein; PDC fold, signaling protein; 1.76A {Vibrio parahaemolyticus} PDB: 3lie_A 2p7j_A*
Probab=36.26 E-value=16 Score=37.70 Aligned_cols=103 Identities=5% Similarity=-0.051 Sum_probs=54.9
Q ss_pred HHHHHHHHHhC--cceEEEcCCCcE-EEecHHHHHHcCCChhhHcCCCccccccccccchHHHHHHHHHHh--CCeEEEE
Q 003963 130 RQYLNILQSMG--QSVHIFDLSDRI-IYWNRSAELLYGYSAEEALGQDAIELLTDGRDFDVAYDIVHRIKM--GERWTGQ 204 (783)
Q Consensus 130 ~~~~~ile~~~--d~I~i~D~~G~I-i~~N~aae~L~Gys~eEllG~~~~~l~~~~~~~~~~~~l~~~l~~--g~~~~~e 204 (783)
+.|..+++.-+ ..|.++|.+|+. +.+|......+-.+..++ .. ......+..+++. |+.+...
T Consensus 67 ~~~~~~~~~~~~~~~i~lid~~G~~i~~~~~~~~~~~~~p~~~l--------~n----~~~R~yf~~a~~~~~~~~~~s~ 134 (295)
T 3lid_A 67 NMWSSVARNQKLYKQIRFLDTSGTEKVRIKYDFKTSIAGPSLIL--------RD----KSAREYFKYAQSLDNEQISAWG 134 (295)
T ss_dssp HHHHHHHHHHCCEEEEEEEETTSBEEEEEEEETTTTEEEECSCC--------CB----CTTSHHHHHHHHSCTTCCEECC
T ss_pred HHHHHHHhcCccccEEEEECCCCCEEEEEEccCCceeEcCcccc--------cc----chhhHHHHHHhcCCCCcEEEeC
Confidence 44666666544 358889999984 445543111110000011 11 1112234555543 3333332
Q ss_pred EEEEcCCC----CEEEEEEEEEEEECCCCCEEEEEEEEEehHHHH
Q 003963 205 FPAKTKTE----ERVLVVATNTPFYDDDGTLVGIVCVSTDSRPFQ 245 (783)
Q Consensus 205 ~~~~~kdG----~~~~v~~~~~Pi~d~~G~v~g~v~i~rDITerk 245 (783)
...-..+| ...++...+.||. .+|+++|++++--|+....
T Consensus 135 ~~~~~~~g~~~~~~~p~i~~a~pV~-~~g~~~GVlv~~i~l~~l~ 178 (295)
T 3lid_A 135 IELERDKGELVYPLSPSLRILMPIS-VNDVRQGYLVLNVDIEYLS 178 (295)
T ss_dssp CEECEETTEECSSCCEEEEEEEEEE-ETTEEEEEEEEEEEHHHHH
T ss_pred ceecccCCcccCCCCCEEEEEEEEc-cCCeEEEEEEEEecHHHHH
Confidence 22222233 2246677788997 6899999999999987654
No 379
>3pxp_A Helix-turn-helix domain protein; DNA-binding, basic helix-loop-helix motif, BHLH motif, lambd repressor-like DNA-binding fold; HET: MSE MYR; 2.30A {Chloroflexus aurantiacus}
Probab=34.26 E-value=26 Score=36.31 Aligned_cols=35 Identities=14% Similarity=0.205 Sum_probs=32.1
Q ss_pred HHHHHHHHHhCcceEEEcCCCcEEEecHHHHHHcC
Q 003963 130 RQYLNILQSMGQSVHIFDLSDRIIYWNRSAELLYG 164 (783)
Q Consensus 130 ~~~~~ile~~~d~I~i~D~~G~Ii~~N~aae~L~G 164 (783)
..++.+++.++.+.+|+|..+.|+.||+++..|++
T Consensus 99 p~l~~lLd~l~~PA~V~d~~~dvla~N~~a~~L~~ 133 (292)
T 3pxp_A 99 QYLIDMIRNMNVPAFVTDQYVNIIAANMITIRFFN 133 (292)
T ss_dssp HHHHHHHHTCSSCEEEEETTCBEEEEEHHHHHHHT
T ss_pred HHHHHHHHhcCCCeEEECCCCCHhhcCHHHHHHhC
Confidence 34789999998899999999999999999999996
No 380
>3nhq_A Bacteriophytochrome; photoreceptor, PAS, signaling, signaling protei; HET: BLA; 2.55A {Pseudomonas aeruginosa} PDB: 3c2w_A* 3nop_C* 3not_C* 3nou_C* 3g6o_A* 3ibr_A*
Probab=33.93 E-value=31 Score=38.64 Aligned_cols=72 Identities=10% Similarity=0.128 Sum_probs=46.9
Q ss_pred ceEEEcCCCcEEEecHHHHHHcCCChhhHcCCCccc-cccccccchHHHHHHHHHHhCCeEEEEEEEEcCCCCEEEEEEE
Q 003963 142 SVHIFDLSDRIIYWNRSAELLYGYSAEEALGQDAIE-LLTDGRDFDVAYDIVHRIKMGERWTGQFPAKTKTEERVLVVAT 220 (783)
Q Consensus 142 ~I~i~D~~G~Ii~~N~aae~L~Gys~eEllG~~~~~-l~~~~~~~~~~~~l~~~l~~g~~~~~e~~~~~kdG~~~~v~~~ 220 (783)
.++++|.+++|+.+...+..++|.+. ++|+++.. ++.+.. ...+...+........-..+ ..+|..|++.+.
T Consensus 28 ~Ll~l~~~~~I~~~S~N~~~~lg~~~--~lG~~l~~~ll~~~~----~~~l~~~l~~~~~~~~p~~~-~~~~~~f~~~~H 100 (505)
T 3nhq_A 28 ALVTLRADGMVLAASENIQALLGFVA--SPGSYLTQEQVGPEV----LRMLEEGLTGNGPWSNSVET-RIGEHLFDVIGH 100 (505)
T ss_dssp EEEEECTTSBEEEEETTHHHHHSSCC--CTTCBCCHHHHHHHH----HHHHHHHHSCSSCCCCEEEE-CSSSSCEEEEEE
T ss_pred EEEEEcCCCeEEEEcccHHHHhCccc--ccCCchhhhhCCHHH----HHHHHHHhhcccccCCcEEE-ecCCceEEEEEE
Confidence 34568889999999999999999988 99999998 876432 23344444433221111222 255666665554
No 381
>3nmd_A CGMP dependent protein kinase; leucine zipper, coiled-coil, structural genomics, berkeley S genomics center, BSGC, dimerization; HET: MSE; 2.27A {Homo sapiens}
Probab=31.61 E-value=37 Score=27.26 Aligned_cols=26 Identities=23% Similarity=0.335 Sum_probs=20.1
Q ss_pred HHHHHHHHHHHHhhHHHHHHHhhhcc
Q 003963 8 AEELLRKIQELEAGQEHLKQELSKLK 33 (783)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~ 33 (783)
.++|-+.|+|.|+...+|+.||+|++
T Consensus 42 I~eLEk~L~ekd~eI~~LqseLDKfr 67 (72)
T 3nmd_A 42 IDELELELDQKDELIQMLQNELDKYR 67 (72)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 45666778888888888888888874
No 382
>3vmx_A Voltage-gated hydrogen channel 1; coiled-coil, ION channel, ION transport, membrane protein; 1.45A {Mus musculus}
Probab=31.28 E-value=33 Score=25.21 Aligned_cols=25 Identities=36% Similarity=0.424 Sum_probs=21.4
Q ss_pred HHHHHHHHHHHhhHHHHHHHhhhcc
Q 003963 9 EELLRKIQELEAGQEHLKQELSKLK 33 (783)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~ 33 (783)
.-|+.||++||.-=..+.||+-+|.
T Consensus 14 ~~L~~kv~~Le~~c~~~eQEieRL~ 38 (48)
T 3vmx_A 14 IQLATKIQHLEFSCSEKEQEIERLN 38 (48)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHccHHHHHHHHHH
Confidence 4578999999999999999987765
No 383
>3cwf_A Alkaline phosphatase synthesis sensor protein PHO; PAS domain, alkaline phosphatase synthesi protein PHOR, structural genomics, PSI-2; HET: EPE; 2.20A {Bacillus subtilis subsp}
Probab=30.54 E-value=2e+02 Score=24.62 Aligned_cols=78 Identities=13% Similarity=0.177 Sum_probs=43.8
Q ss_pred HHHHHHHHhCcceEEEcCCCcEEEecHHHHHHcCCChhhHcCCCccccccccccchHHHHHHHHHHhCCeEEEEEEEEcC
Q 003963 131 QYLNILQSMGQSVHIFDLSDRIIYWNRSAELLYGYSAEEALGQDAIELLTDGRDFDVAYDIVHRIKMGERWTGQFPAKTK 210 (783)
Q Consensus 131 ~~~~ile~~~d~I~i~D~~G~Ii~~N~aae~L~Gys~eEllG~~~~~l~~~~~~~~~~~~l~~~l~~g~~~~~e~~~~~k 210 (783)
.++.+-+....-|.++|.+|+|++-+ . .. ....+. +.+++..+.- +....
T Consensus 39 ~l~~~~~~~~~rItiiD~~G~Vl~dS-~--------------~~-------~~~~~~---v~~al~~~~g-----r~s~t 88 (122)
T 3cwf_A 39 IIKDAGGALDVSASVIDTDGKVLYGS-N--------------GR-------SADSQK---VQALVSGHEG-----ILSTT 88 (122)
T ss_dssp HHHHHHHHHTCEEEEEETTSCEEEET-T--------------SS-------CCCHHH---HHHHHTTCCE-----ECCC-
T ss_pred HHHHHHhhcCcEEEEECCCCcEEEeC-C--------------Cc-------ccchHH---HHHHHhcCCC-----eeecc
Confidence 45555555555799999999999965 1 00 000111 5666665542 22222
Q ss_pred CCCEEEEEEEEEEEECCCCCEEEEEEEEEehHH
Q 003963 211 TEERVLVVATNTPFYDDDGTLVGIVCVSTDSRP 243 (783)
Q Consensus 211 dG~~~~v~~~~~Pi~d~~G~v~g~v~i~rDITe 243 (783)
.| . ...+.||. .+|++.|++-+...+..
T Consensus 89 ~~-~---lyva~Pi~-~~~~~~Gvirv~~~~~~ 116 (122)
T 3cwf_A 89 DN-K---LYYGLSLR-SEGEKTGYVLLSASEKS 116 (122)
T ss_dssp CS-C---CEEEEEEE-ETTEEEEEEEEECC---
T ss_pred CC-c---EEEEEEEe-eCCeEEEEEEEEecccc
Confidence 24 2 34577886 45688899888776554
No 384
>3twe_A Alpha4H; unknown function; HET: PGE; 1.36A {Synthetic} PDB: 3twf_A* 4g4m_A*
Probab=28.03 E-value=80 Score=19.42 Aligned_cols=21 Identities=24% Similarity=0.559 Sum_probs=12.1
Q ss_pred hHHHHHHHHHHHHhhHHHHHH
Q 003963 7 PAEELLRKIQELEAGQEHLKQ 27 (783)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~ 27 (783)
-|.||.+.++.|.+.+..|+.
T Consensus 2 nadelykeledlqerlrklrk 22 (27)
T 3twe_A 2 NADELYKELEDLQERLRKLRK 22 (27)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHH
Confidence 467787765555554444443
No 385
>1kd8_A GABH AIV, GCN4 acid base heterodimer acid-D12IA16V; coiled coil heterodimer, de novo protein; 1.90A {Synthetic} SCOP: h.1.3.1 PDB: 1kdd_A 1kd9_A
Probab=26.53 E-value=22 Score=24.23 Aligned_cols=23 Identities=26% Similarity=0.313 Sum_probs=16.6
Q ss_pred hHHHHHHHHHHHHhhHHHHHHHh
Q 003963 7 PAEELLRKIQELEAGQEHLKQEL 29 (783)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~ 29 (783)
-.+||+.+-.+||.+-++||..+
T Consensus 9 kVEeLl~~~~~Le~EV~RL~~ll 31 (36)
T 1kd8_A 9 EVEEIESEVWHLENEVARLEKEN 31 (36)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhhHHHHHHHHHHHHHh
Confidence 45677777777777777777655
No 386
>3m48_A General control protein GCN4; leucine zipper, synthetic peptide, alpha helix, activa amino-acid biosynthesis, DNA-binding, nucleus; 1.45A {Synthetic} PDB: 3i1g_A 2ahp_A* 2o7h_A
Probab=25.38 E-value=30 Score=23.22 Aligned_cols=25 Identities=36% Similarity=0.359 Sum_probs=17.1
Q ss_pred CChHHHHHHHHHHHHhhHHHHHHHh
Q 003963 5 TGPAEELLRKIQELEAGQEHLKQEL 29 (783)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~ 29 (783)
+.-.+||+.+-.+||.+-++||.=|
T Consensus 6 E~kVEeLl~~n~~Le~EV~RLk~Ll 30 (33)
T 3m48_A 6 EAKVEELLSKNWNLENEVARLKKLV 30 (33)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHHh
Confidence 3446777777777777777776543
No 387
>3a2a_A Voltage-gated hydrogen channel 1; voltage-gated proton channel, alternative splicing, coiled C transport, ionic channel, membrane, transmembrane; 2.00A {Homo sapiens}
Probab=24.41 E-value=53 Score=24.66 Aligned_cols=25 Identities=36% Similarity=0.429 Sum_probs=21.2
Q ss_pred HHHHHHHHHHHhhHHHHHHHhhhcc
Q 003963 9 EELLRKIQELEAGQEHLKQELSKLK 33 (783)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~ 33 (783)
..|+.||++||..-.+-.||+.+|.
T Consensus 21 ~~L~~kv~~Le~~c~e~eQEieRL~ 45 (58)
T 3a2a_A 21 VQLAAKIQHLEFSCSEKEQEIERLN 45 (58)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4688999999998888889988764
No 388
>1uo4_A General control protein GCN4; four helix bundle, cavity, iodobenzene; 1.70A {Saccharomyces cerevisiae} SCOP: h.1.3.1 PDB: 1uo3_A 1unt_A 1uo5_A 1unu_A 1unv_A 1uo1_A 2ccf_A 2cce_A 1unx_A 1unw_A 1w5j_A* 1w5k_A* 1u9f_A* 3f86_A* 3f87_A* 3hez_A* 3c3f_A*
Probab=24.07 E-value=27 Score=23.60 Aligned_cols=24 Identities=29% Similarity=0.439 Sum_probs=17.5
Q ss_pred ChHHHHHHHHHHHHhhHHHHHHHh
Q 003963 6 GPAEELLRKIQELEAGQEHLKQEL 29 (783)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~ 29 (783)
.-.|||+.+-.+||.+.++||.=|
T Consensus 8 dKVEeLl~~n~~Le~EV~RLk~LL 31 (34)
T 1uo4_A 8 DKGEEILSKLYHIENELARIKKLL 31 (34)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHhhHHHHHHHHHHHHHH
Confidence 446778888888888888877544
No 389
>2jn6_A Protein CGL2762, transposase; GFT PSI-2, protein structure, structural genomics, protein structure initiative; NMR {Corynebacterium glutamicum} SCOP: a.4.1.19
Probab=23.65 E-value=28 Score=29.10 Aligned_cols=29 Identities=14% Similarity=0.048 Sum_probs=18.5
Q ss_pred HHHHHHHHHHHHhhHHHHHHHhhhccccC
Q 003963 8 AEELLRKIQELEAGQEHLKQELSKLKISN 36 (783)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 36 (783)
.....++|.+|+++.++|++|+.-|+...
T Consensus 61 ~~~~~~ei~~L~~e~~~L~~e~~~Lkk~~ 89 (97)
T 2jn6_A 61 AVSEAEQIRQLKKENALQRARTRHPAESC 89 (97)
T ss_dssp HHHTHHHHHHHHHCGGGGGGTTSCCCGGG
T ss_pred CCChHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33445667777777777777776666543
No 390
>1kd8_B GABH BLL, GCN4 acid base heterodimer base-D12LA16L; coiled coil heterodimer, de novo protein; 1.90A {Synthetic} SCOP: h.1.3.1 PDB: 1kd9_B 1kdd_B
Probab=23.05 E-value=69 Score=21.87 Aligned_cols=23 Identities=30% Similarity=0.319 Sum_probs=14.7
Q ss_pred hHHHHHHHHHHHHhhHHHHHHHh
Q 003963 7 PAEELLRKIQELEAGQEHLKQEL 29 (783)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~ 29 (783)
-.|||+.+-.+||.+-++||.=+
T Consensus 9 KVEeLl~~~~~Le~eV~RLk~ll 31 (36)
T 1kd8_B 9 KVEELKSKLWHLKNKVARLKKKN 31 (36)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhHHHHHHHHHHHHHh
Confidence 34667777777777777766433
No 391
>4g3b_A Alpha4F3D; alpha helix, de novo designed, fluorinated protein, coiled-C NOVO protein; HET: 6FL; 1.19A {Synthetic} PDB: 4g4l_A* 3twg_A*
Probab=22.98 E-value=65 Score=19.64 Aligned_cols=19 Identities=42% Similarity=0.543 Sum_probs=14.7
Q ss_pred HHHHHHhhHHHHHHHhhhc
Q 003963 14 KIQELEAGQEHLKQELSKL 32 (783)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~ 32 (783)
...|||..|++|+..-.||
T Consensus 6 ~ykeled~qerlrk~rkkl 24 (26)
T 4g3b_A 6 XYKELEDXQERLRKXRKKL 24 (26)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHh
Confidence 4568999999998766554
No 392
>3c3g_A Alpha/beta peptide with the GCN4-PLI SIDE chain S AN (alpha-alpha-beta) backbone; helix bundle, foldamer, unknown function protein; HET: HMR B3Q B3D B3E B3L BIL B3K BAL GOL; 1.80A {Synthetic} PDB: 3heu_A* 3het_A* 3hev_A* 3hew_A* 3hey_A* 3hex_A* 3c3h_A*
Probab=22.45 E-value=18 Score=24.24 Aligned_cols=23 Identities=17% Similarity=0.128 Sum_probs=16.4
Q ss_pred ChHHHHHHHHHHHHhhHHHHHHH
Q 003963 6 GPAEELLRKIQELEAGQEHLKQE 28 (783)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~ 28 (783)
.-.|||+.+-.+||.+.++||.=
T Consensus 7 dKvEeLl~~~~~Le~EV~RLk~l 29 (33)
T 3c3g_A 7 XKLXEIXSKXYHXENXLARIKXL 29 (33)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhHHHHHHHHHHHH
Confidence 34577777778888887777753
No 393
>2bni_A General control protein GCN4; four helix bundle, antiparallel four helix bundle acyl transferase; HET: TYZ; 1.5A {Saccharomyces cerevisiae} SCOP: h.1.3.1 PDB: 2ccn_A 1w5k_A* 2ccf_A 2cce_A 1w5j_A* 1uo2_A 1gcl_A 1uo1_A 1unv_A 1uo0_A 1unt_A 1uo5_A 1unz_A 1unx_A 1unu_A 1unw_A 1uo4_A 1uo3_A 1uny_A 1u9f_A* ...
Probab=21.88 E-value=26 Score=23.63 Aligned_cols=22 Identities=23% Similarity=0.268 Sum_probs=16.3
Q ss_pred ChHHHHHHHHHHHHhhHHHHHH
Q 003963 6 GPAEELLRKIQELEAGQEHLKQ 27 (783)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~ 27 (783)
.-.|||+.+=.+||.+.++||.
T Consensus 8 dKvEeLl~~~~~L~~EV~RLk~ 29 (34)
T 2bni_A 8 DKLEEILSKGHHICNELARIKK 29 (34)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHccHHHHHHHHHHHH
Confidence 4457788888888888887774
No 394
>3c3f_A Alpha/beta peptide with the GCN4-PLI SIDE chain S AN (alpha-alpha-alpha-beta) backbone...; helix bundle, foldamer, unknown function, de novo protein; HET: B3K B3D B3E BIL B3L BAL; 2.00A {Synthetic} SCOP: h.1.3.1
Probab=21.37 E-value=19 Score=24.19 Aligned_cols=23 Identities=13% Similarity=0.182 Sum_probs=16.1
Q ss_pred ChHHHHHHHHHHHHhhHHHHHHH
Q 003963 6 GPAEELLRKIQELEAGQEHLKQE 28 (783)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~ 28 (783)
.-.|+|+.+-.+||.+-++||.=
T Consensus 8 dKVEeLl~~~~~Le~EV~RLk~l 30 (34)
T 3c3f_A 8 XKLEXILSXLYHXENEXARIXKL 30 (34)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhhhhHHHHHHHHHHHH
Confidence 34577777777777777777643
No 395
>3eps_A Isocitrate dehydrogenase kinase/phosphatase; ATP-binding, glyoxylate bypass, nucleotide-binding, protein phosphatase; HET: AMP ATP; 2.80A {Escherichia coli O157} PDB: 3lcb_A* 3lc6_A*
Probab=21.23 E-value=2.8e+02 Score=31.09 Aligned_cols=138 Identities=18% Similarity=0.091 Sum_probs=88.2
Q ss_pred eeccCCcEEEEEEEEeCCceEEEEEEecccCC--HHHHHHHHHHHHHHHhCCCCceeeEec------------ee-----
Q 003963 512 QIGQGSCGTVYHAVWYGSQDVAVKVFSRQEYS--DEVIHSFRQEVSLMKRLRHPNVLLFMG------------AV----- 572 (783)
Q Consensus 512 ~LG~G~fG~Vy~a~~~~~~~vAiK~i~~~~~~--~~~~~~~~~Ei~il~~l~HpnIv~l~~------------~~----- 572 (783)
.+.-|-=|.|-.+....+-+++.|+++..-.. +-..+..+.-..+.++ |.-+=++-+ -+
T Consensus 313 i~APGikGmVM~VFTLPSf~~VFKvIKD~F~p~K~~tr~~Vk~KY~LVK~--hDRVGRMADT~Efsn~~fp~~Rfs~eLL 390 (578)
T 3eps_A 313 IEAPGIRGMVMLVFTLPGFDRVFKVIKDKFAPQKEMSAAHVRACYQLVKE--HDRVGRMADTQEFENFVLEKRHISPALM 390 (578)
T ss_dssp EECSSCCCSSEEEEECTTCSEEEEEECSSCCTTCCCCHHHHHHHHHHHHT--SCCTTTBCCCEEEEEEEEEGGGBCHHHH
T ss_pred EECCCCCceEEEEEcCCCCceEEEEEccCCCCccccCHHHHHHHHHHHHh--hhhhhhhhhhhhhhcccCchhhCCHHHH
Confidence 36789999999999888889999999754221 1111223333333332 322222111 11
Q ss_pred ------------ecCCceEE---EEEecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCCCCE
Q 003963 573 ------------TSPQRLCI---VTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNL 637 (783)
Q Consensus 573 ------------~~~~~~~l---V~E~~~ggsL~~~L~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~IvHrDIKp~NI 637 (783)
..++.++| -+|.- -..|.=+|+.. +..++...+.+.-.|+..|-..+ |.-+|+=-.|+
T Consensus 391 ~EL~~~~ps~le~~gd~liIkHlYiERR-MtPLNLYL~~a----~~~~~~~av~eYG~AIKqLAaAN--IFPGDML~KNF 463 (578)
T 3eps_A 391 ELLLQEAAEKITDLGEQIVIRHLYIERR-MVPLNIWLEQV----EGQQLRDAIEEYGNAIRQLAAAN--IFPGDMLFKNF 463 (578)
T ss_dssp HHHHHHSGGGEEEETTEEEEEEEEEEEC-CEEHHHHHHHC----CTHHHHHHHHHHHHHHHHHHHTT--EECSCCCGGGE
T ss_pred HHHHHhCCccEEEcCCeeEeeeeeeecc-ccchhHHHhhC----CHHHHHHHHHHHHHHHHHHHHhc--CCCcccccccC
Confidence 11232222 22322 13566667543 34566777778889999999988 99999999999
Q ss_pred EEcCCCcEEEEecCCCccccc
Q 003963 638 LVDKHWTVKVGDFGLSRLKHE 658 (783)
Q Consensus 638 Ll~~~~~vkL~DFGla~~~~~ 658 (783)
-|+..|+|..-|+.-.+.+.+
T Consensus 464 GVTRhgRVVFYDYDEI~ylTd 484 (578)
T 3eps_A 464 GVTRHGRVVFYDYDEICYMTE 484 (578)
T ss_dssp EECTTCCEEECCGGGCEESTT
T ss_pred CccccceEEEecccceeeecc
Confidence 999999999999987665544
No 396
>3by9_A Sensor protein; histidine kinase sensor domain, phosphoprotein, transferase, two-component regulatory system; 1.70A {Vibrio cholerae}
Probab=21.15 E-value=3.2e+02 Score=26.13 Aligned_cols=84 Identities=11% Similarity=0.057 Sum_probs=47.1
Q ss_pred cceEEEcCCCcEEEecHHHHHHcCCChhhHcCCCccccccccccchHHHHHHHHHHhCCeEEEEEEEEcCCCCEEEEEEE
Q 003963 141 QSVHIFDLSDRIIYWNRSAELLYGYSAEEALGQDAIELLTDGRDFDVAYDIVHRIKMGERWTGQFPAKTKTEERVLVVAT 220 (783)
Q Consensus 141 d~I~i~D~~G~Ii~~N~aae~L~Gys~eEllG~~~~~l~~~~~~~~~~~~l~~~l~~g~~~~~e~~~~~kdG~~~~v~~~ 220 (783)
..|+++|.+|.++..+... ......|.+.. ....+..++..+.... ...-...|. ++...
T Consensus 73 ~~i~i~d~~G~~~~~~~~~------~~~~~~~~~~~----------~r~~~~~a~~~~~~~~--~~~~~~~g~--~~i~~ 132 (260)
T 3by9_A 73 ADTYLIDRFGNTIASSNWN------LDRSFIGRNFA----------WRPYFYLSIAGQKSQY--FALGSTSGQ--RGYYY 132 (260)
T ss_dssp SEEEEEETTSBEEEETTTT------STTCCTTCBCT----------TSHHHHHHTTTSCEEE--EEECTTTCC--EEEEE
T ss_pred ceEEEECCCCCEEEecCCC------CCCCccCCccc----------cCHHHHHHHhCCCceE--EEEecCCCC--EEEEE
Confidence 3588899999988765310 00111222111 1122445555444332 122234454 45566
Q ss_pred EEEEECCCCCEEEEEEEEEehHHHH
Q 003963 221 NTPFYDDDGTLVGIVCVSTDSRPFQ 245 (783)
Q Consensus 221 ~~Pi~d~~G~v~g~v~i~rDITerk 245 (783)
..||+ .+|+++|++++-.++....
T Consensus 133 ~~pi~-~~g~~~Gvv~~~i~l~~l~ 156 (260)
T 3by9_A 133 AYPVI-YAAEILGVIVVKMDLSAIE 156 (260)
T ss_dssp EEEEE-ETTEEEEEEEEEECSHHHH
T ss_pred EEEEc-cCCeEEEEEEEEEeHHHHH
Confidence 77998 6899999999998987543
No 397
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=21.05 E-value=8.6 Score=42.83 Aligned_cols=29 Identities=10% Similarity=0.023 Sum_probs=25.0
Q ss_pred HHHHHHHHHHHHhCCCCceeeEeceeecC
Q 003963 547 IHSFRQEVSLMKRLRHPNVLLFMGAVTSP 575 (783)
Q Consensus 547 ~~~~~~Ei~il~~l~HpnIv~l~~~~~~~ 575 (783)
...|..|++.+..++|+|+|++++||...
T Consensus 323 ~~eF~~Eve~L~~i~HrNLV~L~gyC~s~ 351 (487)
T 3oja_A 323 SETERLECERENQARQREIDALKEQYRTV 351 (487)
T ss_dssp --CHHHHHHHHHHHHHHHHHHHHHHTCCC
T ss_pred HHHHHHHHHHHhcccccchhhHHHHhcCh
Confidence 46799999999999999999999998764
No 398
>3he4_B Synzip5; heterodimeric coiled-coil, de novo protein; 2.46A {Artificial gene}
Probab=20.53 E-value=74 Score=21.92 Aligned_cols=20 Identities=45% Similarity=0.516 Sum_probs=16.5
Q ss_pred HHHHHHHHHHHHhhHHHHHH
Q 003963 8 AEELLRKIQELEAGQEHLKQ 27 (783)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~ 27 (783)
..||-.-|||||+.-++||.
T Consensus 5 vkelknyiqeleernaelkn 24 (46)
T 3he4_B 5 VKELKNYIQELEERNAELKN 24 (46)
T ss_dssp HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhHHHHh
Confidence 46788889999998888765
Done!