BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 003964
(783 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q6ZI17|OML2_ORYSJ Protein MEI2-like 2 OS=Oryza sativa subsp. japonica GN=ML2 PE=2
SV=1
Length = 848
Score = 573 bits (1477), Expect = e-162, Method: Compositional matrix adjust.
Identities = 312/588 (53%), Positives = 385/588 (65%), Gaps = 62/588 (10%)
Query: 196 TLFVRNINSNVEDLELRSLFEQYGDIRTLYTA--CKHRGF--FYDVRAAEAALRALNRSD 251
TL + N++ +V + E+R +F YG+++ + KH F FYDVRAAEAALR+LN+S+
Sbjct: 283 TLVIFNLDPSVSNEEVRQIFGTYGEVKEIRETPNKKHHKFIEFYDVRAAEAALRSLNKSE 342
Query: 252 INGKRIKLEPSRPGGARRNLMQQLNQELEQDEARGFR-HQVGSPVTNSPPGTWAQFGSPV 310
I GKRIKLEPSRPGG RRNLMQQL +++QDE R +R VGSP+ +SPPG WAQ+ SP
Sbjct: 343 IAGKRIKLEPSRPGGTRRNLMQQLGHDIDQDEPRSYRIPHVGSPIASSPPGAWAQYSSPT 402
Query: 311 ERNPLHAFSKSPGLGTLSPINSNPLHAFSKSTGLATPTPVNSNHLPGLASILPPHL-SNT 369
+ N L AF+ SP +SPI +PP L SN
Sbjct: 403 DNNLLQAFNASPTGNGMSPIG------------------------------MPPSLISNA 432
Query: 370 GKIAPIGKDQGRANQTNHMFSNSASLQGAAYQHSQSFPEQKLSASPGPKSPFGESNSNSS 429
KIAPIGKD + + + +FSN+ GAA+QHS S+ + K S SS
Sbjct: 433 VKIAPIGKDSNWS-KYDKVFSNNNQPHGAAFQHSHSYQDHK-------------SEHMSS 478
Query: 430 GVGTLSGPQFLWGSPPPYSERSSSSAWPTSSVGH--PFSSSGQGQGFPYGSRHGSFIGSH 487
GTL+GP+FLWGSP PYSE + S W ++GH P ++ QGQG YG R S GS
Sbjct: 479 SPGTLTGPEFLWGSPKPYSEHAQSPIWRPPAIGHAIPSNTRSQGQGLLYGGRQASLFGSQ 538
Query: 488 ---HQHHVGSAPSGVSLDRNFGFFPESPETSFTNPVP---LGGMGLSRNNAGYMMNVGGR 541
H HHVGSAPSG + +FGF PESPETS+ N V +G +G RN G M+N+ R
Sbjct: 539 DQLHHHHVGSAPSGAPFESHFGFLPESPETSYMNQVRFGNIGNIGSGRNGTGLMLNMAAR 598
Query: 542 VGV----GLPLNVTDNGSPSLRMMSFPRHGPLFFGNGSYSGLGTTSNEAFTERGRTRRVE 597
V L N++DN S S R + PR G F+GN +Y G G+ + ERGR RRV+
Sbjct: 599 ASVNPVSALSGNMSDNNSSSFRPILSPRLGQSFYGNPTYQGPGSFGLDNSIERGRNRRVD 658
Query: 598 NCGSQVDSKKQYQLDLDKIISGEDTRTTLMIKNIPNKYTSKMLLAAIDENHRGTYDFLYL 657
+ Q DSKKQYQLDL+KI G+DTRTTLMIKNIPNKYTSKMLLAAIDE H+GTYDF YL
Sbjct: 659 SSVFQADSKKQYQLDLEKIRKGDDTRTTLMIKNIPNKYTSKMLLAAIDEFHKGTYDFFYL 718
Query: 658 PIDFKNKCNVGYAFINMVSPSHIISFYEAFNGKKWEKFNSEKVASLAYARIQGQAALVTH 717
PIDFKNKCNVGYAFINM+SP HI+SFY+AFNGKKWEKFNSEKVASLAYARIQG+ AL++H
Sbjct: 719 PIDFKNKCNVGYAFINMISPVHIVSFYQAFNGKKWEKFNSEKVASLAYARIQGRTALISH 778
Query: 718 FQNSSLMNEDKRCRPIVFHSEGQETSDQEALLSSNLNIFIRQPDGSYS 765
FQNSSLMNEDKRCRPI+FHS G + +QE + + I + DG+ +
Sbjct: 779 FQNSSLMNEDKRCRPILFHSNGPDAGNQEPFPINGICIHMPLEDGAIA 826
Score = 220 bits (560), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 118/231 (51%), Positives = 158/231 (68%), Gaps = 8/231 (3%)
Query: 41 ANNASNDASLFSSSLPVLPHEKLNFADSEHHDQSVDDSSPTLNKIDLENESNGPLAG--V 98
A N +ASLFS+SLPVLPHEK+NF DS +DD+S L ++D + E +
Sbjct: 41 ARNGLANASLFSTSLPVLPHEKINFLDSARGTPLMDDASAKLKELDDDPEGKDYKFDFDL 100
Query: 99 ETIGSLLPDDENDLLAGLVDDFDLRGLPSQLEDLED-DLFDSGGGMELEFEPHESLSIGV 157
I LLP+ E+DL AG+ ++ + G + +E+LE+ D+F SGGGMEL+ +P ES++ G+
Sbjct: 101 RQIDDLLPN-EDDLFAGITNEIEPAGQTNSMEELEEFDVFGSGGGMELDTDPVESITAGL 159
Query: 158 SKLNISDGIAGTGIAHYPISNGVGTVAGEHPYGEHPSRTLFVRNINSNVEDLELRSLFEQ 217
+I+DG+ G G+ H+ SN TVAGEHPYGEHPSRTLFVRNINSNV+D ELRSLFEQ
Sbjct: 160 GNTSIADGLRGNGVNHFGPSNSASTVAGEHPYGEHPSRTLFVRNINSNVDDTELRSLFEQ 219
Query: 218 YGDIRTLYTACKHRGF----FYDVRAAEAALRALNRSDINGKRIKLEPSRP 264
YGDIRTLYTA KHRGF ++D+RAA A+R L + +++ + S P
Sbjct: 220 YGDIRTLYTATKHRGFVMISYFDIRAARGAMRGLQNKPLRRRKLDIHFSIP 270
>sp|Q8VWF5|AML5_ARATH Protein MEI2-like 5 OS=Arabidopsis thaliana GN=ML5 PE=1 SV=1
Length = 800
Score = 548 bits (1412), Expect = e-155, Method: Compositional matrix adjust.
Identities = 366/818 (44%), Positives = 482/818 (58%), Gaps = 108/818 (13%)
Query: 22 LTIPKKVGSGAWGI--SFGTEANNASNDASLFSSSLPVLPHEKLNFADSEHHDQSVDDSS 79
+ IP + +GAWGI FG ++ S+DA+LFSSSLPV P KL +D+ +DD++
Sbjct: 1 MDIPHEAEAGAWGILPGFGRH-HHPSSDATLFSSSLPVFPRGKLQLSDNRDGFSLIDDTA 59
Query: 80 PTLNKIDLENESNGPLAGVETIGSLLPDDENDLLAGLVDDFDLRGLPSQLEDLED-DLFD 138
+++ + NES +IG+LLPD+E DLL G++DD DL LP D +D DLF
Sbjct: 60 --VSRTNKFNESADDFES-HSIGNLLPDEE-DLLTGMMDDLDLGELP----DADDYDLFG 111
Query: 139 SGGGMELEFEPHESLSI-GVSKLNISDGIAGTGIAHYPISNGVGTVAGEHPYGEHPSRTL 197
SGGGMEL+ + ++LS+ G +L++S + G I + I NG GTVAGEHPYGEHPSRTL
Sbjct: 112 SGGGMELDADFRDNLSMSGPPRLSLS-SLGGNAIPQFNIPNGAGTVAGEHPYGEHPSRTL 170
Query: 198 FVRNINSNVEDLELRSLFEQYGDIRTLYTACKHRGF----FYDVRAAEAALRALNRSDIN 253
FVRNINSNVED EL +LFEQYGDIRTLYT CKHRGF +YD+R+A A+R+L +
Sbjct: 171 FVRNINSNVEDSELTALFEQYGDIRTLYTTCKHRGFVMISYYDIRSARMAMRSLQNKPLR 230
Query: 254 GKRIKLEPSRPGG--ARRNLMQ------QLNQELEQDEARGF----------------RH 289
+++ + S P + +++ Q L+ + D+ G RH
Sbjct: 231 RRKLDIHFSIPKDNPSEKDMNQGTLVVFNLDPSISNDDLHGIFGAHGEIKEIRETPHKRH 290
Query: 290 Q-----------------------VGSPVTNSP--PG-----TWAQFGSPVERNPLHAF- 318
G + P PG Q +E + LH
Sbjct: 291 HKFVEFYDVRGAEAALKALNRCEIAGKRIKVEPSRPGGARRSLMLQLNQDLENDDLHYLP 350
Query: 319 ------SKSPGLGTLSPINS----NPLHAFSKSTGLATPTPVNSNHLPGLASILPPHLSN 368
+ SP + P+NS +PL + + + +P + HL GLAS L
Sbjct: 351 MIGSPMANSPPMQGNWPLNSPVEGSPLQSVLSRSPVFGLSPTRNGHLSGLASALNSQ-GP 409
Query: 369 TGKIAPIGKDQGRANQTNHMFSNSASLQGAAYQHSQSFPEQKL-SASPGPKSPFGESNSN 427
+ K+APIG+ Q +N Q S F E K+ + G SP G SN
Sbjct: 410 SSKLAPIGRGQIGSN--------------GFQQSSHLFQEPKMDNKYTGNLSPSGPLISN 455
Query: 428 SSGVGTLSGPQFLWGSPPPYSERSSSSAWPTSSVGHPFSSSGQGQGFPYGSRHGSFIGSH 487
G+ TLSG +FLWGSP SE SSSS W TSS G+P S+ + P+ +H + SH
Sbjct: 456 GGGIETLSGSEFLWGSPNARSEPSSSSVWSTSSTGNPLFSTRVDRSVPFPHQHQNQSRSH 515
Query: 488 HQHHVGSAPSGVSLDRNFGFFPESPETS-FTNPVPL---GGMGLSRNNAGYMMNVGGRVG 543
H HVGSAPSGV L+++FGF PES + + F N V L GMGL+ + M G +
Sbjct: 516 HHFHVGSAPSGVPLEKHFGFVPESSKDALFMNTVGLQGMSGMGLNGGSFSSKMANNGIIN 575
Query: 544 VGLPLNVTDNGSPSLRMMSFPRHGPLFFGNGSYSGLGTTSNEAFTERGRTRRVENCGSQV 603
G ++ +NG S RMMS PR P+F +G G + ++ E GR RRVEN +QV
Sbjct: 576 SG---SMAENGFSSYRMMSSPRFSPMFLSSGLNPGRFASGFDSLYENGRPRRVENNSNQV 632
Query: 604 DSKKQYQLDLDKIISGEDTRTTLMIKNIPNKYTSKMLLAAIDENHRGTYDFLYLPIDFKN 663
+S+KQ+QLDL+KI++GED+RTTLMIKNIPNKYTSKMLLAAIDE ++GTY+FLYLPIDFKN
Sbjct: 633 ESRKQFQLDLEKILNGEDSRTTLMIKNIPNKYTSKMLLAAIDEKNQGTYNFLYLPIDFKN 692
Query: 664 KCNVGYAFINMVSPSHIISFYEAFNGKKWEKFNSEKVASLAYARIQGQAALVTHFQNSSL 723
KCNVGYAFINM++P II FYEAFNGKKWEKFNSEKVASLAYARIQG++AL+ HFQNSSL
Sbjct: 693 KCNVGYAFINMLNPELIIPFYEAFNGKKWEKFNSEKVASLAYARIQGKSALIAHFQNSSL 752
Query: 724 MNEDKRCRPIVFHSEGQETSDQEAL--LSSNLNIFIRQ 759
MNED RCRPI+F + S ++ + S N+++ Q
Sbjct: 753 MNEDMRCRPIIFDTPNNPESVEQVVDEESKNMDLLDSQ 790
>sp|Q9SVV9|AML3_ARATH Protein MEI2-like 3 OS=Arabidopsis thaliana GN=ML3 PE=2 SV=2
Length = 759
Score = 435 bits (1118), Expect = e-121, Method: Compositional matrix adjust.
Identities = 267/552 (48%), Positives = 333/552 (60%), Gaps = 91/552 (16%)
Query: 196 TLFVRNINSNVEDLELRSLFEQYGDIRTLYTA--CKHRGF--FYDVRAAEAALRALNRSD 251
TL V N+ +V + +L ++F YG+I+ + +H F F+DVR+A+AAL+ALNR++
Sbjct: 252 TLVVFNLAPSVSNRDLENIFGVYGEIKEIRETPNKRHHKFVEFFDVRSADAALKALNRTE 311
Query: 252 INGKRIKLEPSRPGGARRNLMQQLNQELEQDEARGFRHQVGSPVTNSPPGTWAQFGSPVE 311
I GKRIKLE SRPGGARRN+M Q+N ELEQD++ + + V SP+ +SP G W SP++
Sbjct: 312 IAGKRIKLEHSRPGGARRNMMLQMNPELEQDDSYSYLNHVESPLASSPIGNWR--NSPID 369
Query: 312 RNPLHAFSKSPGLGTLSPINSNPLHAFSKSTGLATPTPVNSNHLPGLASILPPHLSNTGK 371
+PL +FSKSP G LSP + FS T
Sbjct: 370 -HPLQSFSKSPIFGNLSPTKNIRYPEFSMKT----------------------------- 399
Query: 372 IAPIGKDQ--GRANQTNHMFS----NSASLQGAAYQHSQSFPEQKLSASPGPKSPFGESN 425
A + DQ R + +H+FS N+AS + + +Q QSF S N
Sbjct: 400 -ASVNNDQEGRRFSHLDHLFSSSSYNNASHKASTFQQPQSFGSVSSFGS---------LN 449
Query: 426 SNSSGVGTLSGPQFLWGSPPPYSERSSSSAWPTSSVGHPFSSSGQGQGFPYGSRHGSFIG 485
S+ S V TLSG +FLWGSP SSSAWP + PFSS+ + FPY +++GS
Sbjct: 450 SHPSHVETLSGSEFLWGSP-------SSSAWPVN----PFSSNRENHRFPYSAQNGSL-- 496
Query: 486 SHHQHHVGSAPSGVSLDRNFGFFPESPETSFTNPVPLGGMGLSRNNAGYMMNVGGRVGVG 545
H HH+GSAPSG FFP SPETS V G A MN
Sbjct: 497 -HQLHHIGSAPSG--------FFPRSPETSSMGSVAFRG-------ASGNMNAQR----- 535
Query: 546 LPLNVTDNGSPSLRMMSFPRHGPLFFGNGSYSGLGTT--SNEAFTERGRTRRVENCGSQV 603
N+ + SP+ +M+S PR LF GNGSY T S + E G ++ ++ G+Q
Sbjct: 536 ---NLRETSSPNFKMLSAPRRSQLFTGNGSYLWPAATMVSIDDPLEDGSNQQFDSNGNQA 592
Query: 604 DSKKQYQLDLDKIISGEDTRTTLMIKNIPNKYTSKMLLAAIDENHRGTYDFLYLPIDFKN 663
D K Q+QLDL KI+ GED RTTLMIKNIPNKYT MLLAAIDE + GTYDFLYLPIDFKN
Sbjct: 593 DIKIQFQLDLSKIMRGEDPRTTLMIKNIPNKYTRNMLLAAIDEKNSGTYDFLYLPIDFKN 652
Query: 664 KCNVGYAFINMVSPSHIISFYEAFNGKKWEKFNSEKVASLAYARIQGQAALVTHFQNSSL 723
KCNVGYAFINMVSP I+ YEAFNGKKW+KFNSEKVASLAYARIQG+AAL+ HFQNSSL
Sbjct: 653 KCNVGYAFINMVSPKFTIALYEAFNGKKWDKFNSEKVASLAYARIQGKAALIAHFQNSSL 712
Query: 724 MNEDKRCRPIVF 735
MNED+RC+PIVF
Sbjct: 713 MNEDRRCQPIVF 724
Score = 200 bits (509), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 108/220 (49%), Positives = 148/220 (67%), Gaps = 19/220 (8%)
Query: 56 PVLPHEKLNFADSEHHDQSVDDSSPTLNKID------LENESNGPLAGVETIGSLLPDDE 109
P++ H+ +N DS H QSVD+ + L+ L++ + P IG++LPDDE
Sbjct: 28 PLIQHQNINPRDSYH--QSVDEMASGLDHFSGGIGNMLDDGDSHP------IGNMLPDDE 79
Query: 110 NDLLAGLVDDFDLRGLPSQLEDLED-DLFDSGGGMELEFEPHESLSIGVSKLNISDGIAG 168
+L +GL+DD +L LP+ L+DLED DLF SGGG+ELE +P++SL+ G S++ +D
Sbjct: 80 EELFSGLMDDLNLSSLPATLDDLEDYDLFGSGGGLELETDPYDSLNKGFSRMGFADSNVD 139
Query: 169 TGIAHYPISNGVGTVAGEHPYGEHPSRTLFVRNINSNVEDLELRSLFEQYGDIRTLYTAC 228
+ NGVG++AGEHPYGEHPSRTLFVRNINSNVED EL++LFEQYG IRTLYTAC
Sbjct: 140 NVMPQNIFQNGVGSIAGEHPYGEHPSRTLFVRNINSNVEDSELQALFEQYGHIRTLYTAC 199
Query: 229 KHRGF----FYDVRAAEAALRALNRSDINGKRIKLEPSRP 264
K RGF + D+RA+ AA+RAL + +++ + S P
Sbjct: 200 KQRGFVMVSYNDIRASRAAMRALQGKLLKKRKLDIHFSIP 239
>sp|Q6EQX3|OML5_ORYSJ Protein MEI2-like 5 OS=Oryza sativa subsp. japonica GN=ML5 PE=2
SV=1
Length = 811
Score = 430 bits (1106), Expect = e-119, Method: Compositional matrix adjust.
Identities = 258/578 (44%), Positives = 338/578 (58%), Gaps = 71/578 (12%)
Query: 196 TLFVRNINSNVEDLELRSLFEQYGDIRTLYTA--CKHRGF--FYDVRAAEAALRALNRSD 251
TL + N+ V + EL +F +G++R + +H F FYDVRAAE+ALR+LN+SD
Sbjct: 279 TLVIFNLEPAVSNEELLQIFGAFGEVREIRETPHKRHHRFIEFYDVRAAESALRSLNKSD 338
Query: 252 INGKRIKLEPSRPGGARRNLMQQLNQELEQDEARGFRHQVGSPVTNSPPGTWAQFGSPVE 311
I GKR+KLEPSRPGGARR+ +Q N E EQDE + Q+GSP NSPP W+Q GSP +
Sbjct: 339 IAGKRVKLEPSRPGGARRSFIQHFNHEFEQDETKHNSFQIGSPSANSPPSLWSQLGSPTD 398
Query: 312 RNPLHAFSKSPGLGTLSPINSNPLHAFSKSTGLATPTPVNSNHLPGLASILPPHLSNTGK 371
N L+A +++ G +SP+ SN HL G +S PP S
Sbjct: 399 ENKLNALNETAFNGGMSPLGSN--------------------HLSGFSSGYPPMKS---- 434
Query: 372 IAPIGKDQGRANQTNHMFSNSASLQGAAYQHSQSFPEQK--LSASPGPKSPFGESNSNSS 429
P+GK N+ +++F S +L +S SFPE + ++ S S S +S
Sbjct: 435 --PVGKSSYWNNRADNIFHGSPTLH-----NSHSFPEHHGGIISASPLVSSAASSASTAS 487
Query: 430 GVGTLSGPQFLWGSPPPYSERSSSSAWPTSSVGHPF--SSSGQGQGFPYGSRHGSFIGSH 487
G L+G FLWG+ + S+ + ++ + ++ Q Q Y + GSF S
Sbjct: 488 GFTALTGTSFLWGNNNNLRDHGQPSSIQSQALSNSLFPNNQPQRQSNLYQNLRGSFGASE 547
Query: 488 H--QHHVGSAPSGVSLDRNFGFFPESPETSFTNPVPLGGMGLSRNNAGYMMNVGGRVGVG 545
H Q +VGSAPS + NFG+F +SP+TS+ GG G +R + M N G
Sbjct: 548 HFSQFNVGSAPSVFPFESNFGYFSDSPDTSYMRQGKFGGTGPTRVSGSLMTNFG------ 601
Query: 546 LPLNVTDNGSPSLRMMSFPRHGPLFFGNGSYSGLGTTSNEAFTERGRTRRVENCGSQVDS 605
++PR NGS E +RGR + V N G Q DS
Sbjct: 602 ----------------AYPRINVASMQNGS------VGFEGLLDRGRNQTVGNSGCQEDS 639
Query: 606 KKQYQLDLDKIISGEDTRTTLMIKNIPNKYTSKMLLAAIDENHRGTYDFLYLPIDFKNKC 665
+ QYQLDL+KII+G+DTRTTLMIKNIPNKYTS MLL IDE H GTYDF YLPIDFKNKC
Sbjct: 640 RVQYQLDLEKIIAGKDTRTTLMIKNIPNKYTSNMLLEVIDETHEGTYDFFYLPIDFKNKC 699
Query: 666 NVGYAFINMVSPSHIISFYEAFNGKKWEKFNSEKVASLAYARIQGQAALVTHFQNSSLMN 725
NVGYAFINM SP +I+SF++AF G+KWEKFNSEKV SLAYARIQG+AALV HFQNSSLMN
Sbjct: 700 NVGYAFINMASPGYIVSFFKAFAGRKWEKFNSEKVVSLAYARIQGKAALVNHFQNSSLMN 759
Query: 726 EDKRCRPIVFHSEGQETSDQEALLSSNLNIFIRQPDGS 763
EDKRCRP++F + E ++Q +L + + I + Q D +
Sbjct: 760 EDKRCRPMLFDPKHTENNNQ--ILLNGIFISMAQQDAT 795
Score = 203 bits (516), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 124/263 (47%), Positives = 164/263 (62%), Gaps = 13/263 (4%)
Query: 12 HSKGS--SNIPSLTIPKKVGSGAWGISFGTEANNASNDASLFSSSLP-VLPHEKLNFADS 68
H+K S + IPS + AWG T N S+DA LFSSSLP VL KL +
Sbjct: 7 HTKSSEPAFIPSKRTHQMRNIWAWGGPSSTTVN-GSSDAVLFSSSLPSVLQFGKLPGKER 65
Query: 69 EHHDQSVDDSSPTLNKIDLENESNGPLAGV--ETIGSLLPDDENDLLAGLVDDFDLRGLP 126
E++ Q DD P + + P+ V IG+LLPDDE +LLAG+++DFD L
Sbjct: 66 EYNAQPKDDMFPMMKQPGTNARVADPMDDVAQHLIGNLLPDDE-ELLAGVIEDFDHVKLR 124
Query: 127 SQLEDLED-DLFDSGGGMELEFEPHESLSIGVSKLNISDGIAGTGIAHYPISNGVGTVAG 185
+Q+E+ E+ D+F + GGMEL+ +P ES++ G +K ++ +G G+ Y I NG GTV G
Sbjct: 125 TQVEESEEYDVFRNSGGMELDIDPLESITFGTAKASLVNG-TGSSTNQYSIQNGAGTVTG 183
Query: 186 EHPYGEHPSRTLFVRNINSNVEDLELRSLFEQYGDIRTLYTACKHRGF----FYDVRAAE 241
EHPYGEHPSRTLFVRNINSNVED ELRSLFE +GDIR++YTA KHRGF +YD+R A
Sbjct: 184 EHPYGEHPSRTLFVRNINSNVEDSELRSLFEPFGDIRSMYTATKHRGFVMISYYDIRHAR 243
Query: 242 AALRALNRSDINGKRIKLEPSRP 264
A AL + +++ + S P
Sbjct: 244 NAKTALQSKPLRRRKLDIHYSIP 266
>sp|Q9SJG8|AML2_ARATH Protein MEI2-like 2 OS=Arabidopsis thaliana GN=ML2 PE=2 SV=2
Length = 843
Score = 397 bits (1019), Expect = e-109, Method: Compositional matrix adjust.
Identities = 251/587 (42%), Positives = 333/587 (56%), Gaps = 53/587 (9%)
Query: 196 TLFVRNINSNVEDLELRSLFEQYGDIRTLYTACKHRGF----FYDVRAAEAALRALNRSD 251
TL + N+++ V + EL LF YG+IR + R +YDVR AE AL+ALNRS+
Sbjct: 284 TLVIFNVDTTVSNDELLQLFGAYGEIREIRETPNRRFHRFIEYYDVRDAETALKALNRSE 343
Query: 252 INGKRIKLEPSRPGGARRNLMQQLNQELEQDEARGFRHQVGSPVTNSPPGTWAQFGSPVE 311
I GK IKLE SRPGGARR + +Q+LE+ E F +QVGS V NSPPG W P+
Sbjct: 344 IGGKCIKLELSRPGGARRLSVPSQSQDLERTEVTNFYNQVGSHVANSPPGNW-----PIG 398
Query: 312 RNPLHAFSKSPGLGTLSPINSNPLHAFSKSTGLATPTPVNSNHLPGLASILPPHLSNTGK 371
SP+ +P HAF++ GL PVNS+++PGLASILP H S+
Sbjct: 399 ----------------SPVKGSPSHAFTRPHGLGMVRPVNSDNMPGLASILPAHPSSFHG 442
Query: 372 IAPIGKDQGRANQTNHMFSNSASLQGAAYQHSQSFPEQKLSASPGPKSPFGESNSNSSGV 431
+P+ DQG N +N N + +Y S PE + G + +SSG
Sbjct: 443 FSPVSNDQGLLNHSNQTILNKGLMHNISYGQPHSLPEH---ITGGISNSMRFIAPHSSGF 499
Query: 432 GTLSGPQFLWGSPPPYSER--SSSSAWPTSSVGHPFSSSGQGQGFPYGSRHGSFIGSHHQ 489
GT S ++ WGSPP + + + +SS PF+ GFP+ R S +G + Q
Sbjct: 500 GTSSDHRYRWGSPPQHMNYPGYTGVSSSSSSTERPFTVR---HGFPFAERQASLLGKY-Q 555
Query: 490 HHVGSAPSGVSLDRNFGFFPESPETSFTNPVPLG--GMGLSRN-NAGYMMNVGGRVGVGL 546
HHVGSAPS + + + SPE +PLG MG++RN N+ + +GV L
Sbjct: 556 HHVGSAPSSIHFNTQMNCYTGSPE------IPLGFSDMGINRNYNSAHG---KANLGVSL 606
Query: 547 PLNVTDNGSPSLRMMSFPRHGPLFFGNGSYSGLGTTSNEAFTERGRTRRVENCG-SQVDS 605
P N ++ M S P + FG GL + E F E+GR E+ +Q
Sbjct: 607 PGNSSEQDFTGFGMSSMPT---VPFGGSR--GLQSVRPEPFAEQGRIHNHESHNQNQFID 661
Query: 606 KKQYQLDLDKIISGEDTRTTLMIKNIPNKYTSKMLLAAIDENHRGTYDFLYLPIDFKNKC 665
+Y +DLD+I SG++ RTTL+IKNIPNKYT KML+A IDE H+G YDFL LP DFKNKC
Sbjct: 662 GGRYHIDLDRIASGDEIRTTLIIKNIPNKYTYKMLVAEIDEKHKGDYDFLCLPTDFKNKC 721
Query: 666 NVGYAFINMVSPSHIISFYEAFNGKKWEKFNSEKVASLAYARIQGQAALVTHFQNSSLMN 725
N+G+AFINMVSP HI+ F + FNGK WEKFNS KVASLAYA IQG++AL ++ Q S M
Sbjct: 722 NMGHAFINMVSPLHIVPFQQTFNGKIWEKFNSGKVASLAYAEIQGKSALASYMQTPSSMK 781
Query: 726 EDKRCRPIV-FHSEGQETSDQEALLSSNLNIFIRQPDGSYSGDSLES 771
E K+ P V +H +GQ+ +D E L SS NI D SY+ D +E+
Sbjct: 782 EQKQLFPEVSYHDDGQDANDHEQLFSSIWNITAPDSDWSYTMDLIEN 828
Score = 193 bits (491), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 107/217 (49%), Positives = 142/217 (65%), Gaps = 8/217 (3%)
Query: 55 LPVLPHEKLNFADSEHHDQSVDDSSPTLNKIDLENESNGPLAGVE--TIGSLLPDDENDL 112
LP L HEKLN DS+ S D+SSP LNK+ + N L VE + LLP+DEN+L
Sbjct: 56 LPTLFHEKLNMTDSDSW-LSFDESSPNLNKLVIGNSEKDSLEDVEPDALEILLPEDENEL 114
Query: 113 LAGLVDDFDLRGLPSQLEDLED-DLFDSGGGMELEFEPHESLSIGVSKLNISDGIAGTGI 171
L GL+D+ + GLP +L+DLE+ D+F +GGGMEL+ E ++ ++ S + ISD A
Sbjct: 115 LPGLIDELNFTGLPDELDDLEECDVFCTGGGMELDVESQDNHAVDASGMQISDRGAANAF 174
Query: 172 AHYPISNGVGTVAGEHPYGEHPSRTLFVRNINSNVEDLELRSLFEQYGDIRTLYTACKHR 231
N G V+ EHP GEHPSRTLFVRNINS+VED EL +LFE +G+IR+LYTACK R
Sbjct: 175 VPRKRPNTAGRVSVEHPNGEHPSRTLFVRNINSSVEDSELSALFEPFGEIRSLYTACKSR 234
Query: 232 GF----FYDVRAAEAALRALNRSDINGKRIKLEPSRP 264
GF +YD+RAA AA+RAL + + + + + S P
Sbjct: 235 GFVMISYYDIRAAHAAMRALQNTLLRKRTLDIHFSIP 271
>sp|Q64M78|OML4_ORYSJ Protein MEI2-like 4 OS=Oryza sativa subsp. japonica GN=ML4 PE=2
SV=1
Length = 1001
Score = 327 bits (837), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 255/622 (40%), Positives = 332/622 (53%), Gaps = 101/622 (16%)
Query: 196 TLFVRNINSNVEDLELRSLFEQYGDIRTLYTACK---HRGF-FYDVRAAEAALRALNRSD 251
T+ + N++ ++ + +L +F YG+I+ + + H+ FYDVRAAEAALRALNR+D
Sbjct: 361 TIVLFNVDLSLTNDDLHKIFGDYGEIKEIRDTPQKGHHKIIEFYDVRAAEAALRALNRND 420
Query: 252 INGKRIKLEPSRPGGARRNLMQQLNQELEQDEARGFRHQVGSPVTNSPPGTWAQFGSPVE 311
I GK+IKLE SR G ARR L Q ++ EL Q+E + +GSP T+SPP A FG
Sbjct: 421 IAGKKIKLETSRLGAARR-LSQHMSSELCQEEFGVCK--LGSPSTSSPP--IASFG---- 471
Query: 312 RNPLHAFSKSPGLGTLSPINSNPLHAFSKSTGLATP-TPVNSNHLPGLASILPPHL---- 366
S L T++ +GL T + PGL+S +P L
Sbjct: 472 ---------STNLATITSTGHENGSIQGMHSGLQTSISQFRETSFPGLSSTIPQSLSTPI 522
Query: 367 --------SNTGKIAPIGKDQGRANQTNHMFSNSASLQGAAYQHSQSFPE---------- 408
SN + I + GR N HM + S QG + H S PE
Sbjct: 523 GISSGATHSNQAALGEISQSLGRMN--GHM---NYSFQGMSALHPHSLPEVHNGVNNGVP 577
Query: 409 ----QKLSASPGPKSPFGESNSN----SSGVGTLSG----------------------PQ 438
G S E+ N G G L+G Q
Sbjct: 578 YNLNSMAQVVNGTNSRTAEAVDNRHLHKVGSGNLNGHSFDRAEGALGFSRSGSSSVRGHQ 637
Query: 439 FLWGSPPPYSERSSSSA-WPT--SSVGH-PFSSSGQGQGFPYG--SRHGSFIGSHHQHHV 492
+W + + +S WP+ S V + P S Q G P S + H HV
Sbjct: 638 LMWNNSSNFHHHPNSPVLWPSPGSFVNNVPSRSPAQMHGVPRAPSSHMIDNVLPMHHLHV 697
Query: 493 GSAPS-GVSL-DRNFGFFPESPETSFTNPVPLGGMGLSRNNAGYMM---NVGGRVG---V 544
GSAP+ SL DR G+ E E +P +G MG + + M N+ + G +
Sbjct: 698 GSAPAINPSLWDRRHGYAGELTEAPNFHPGSVGSMGFPGSPQLHSMELNNIYPQTGGNCM 757
Query: 545 GLPLNVTDNGSPSLRMMSFPRHGPLFFGNGSYSGLGTTSNEAFTERGRTRRVENCGSQVD 604
++ G PS + + G +F G L S ++ ER R+RR ++ G+Q D
Sbjct: 758 DPTVSPAQIGGPSPQ-----QRGSMFHGRNPMVPL--PSFDSPGERMRSRRNDSNGNQSD 810
Query: 605 SKKQYQLDLDKIISGEDTRTTLMIKNIPNKYTSKMLLAAIDENHRGTYDFLYLPIDFKNK 664
+KKQY+LD+D+I+ G+D+RTTLMIKNIPNKYTSKMLLAAIDENH+GTYDF+YLPIDFKNK
Sbjct: 811 NKKQYELDVDRIVRGDDSRTTLMIKNIPNKYTSKMLLAAIDENHKGTYDFIYLPIDFKNK 870
Query: 665 CNVGYAFINMVSPSHIISFYEAFNGKKWEKFNSEKVASLAYARIQGQAALVTHFQNSSLM 724
CNVGYAFINM +P HII FY+ FNGKKWEKFNSEKVASLAYARIQG++AL+ HFQNSSLM
Sbjct: 871 CNVGYAFINMTNPQHIIPFYQTFNGKKWEKFNSEKVASLAYARIQGKSALIAHFQNSSLM 930
Query: 725 NEDKRCRPIVFHSEGQETSDQE 746
NEDKRCRPI+FHS+G DQE
Sbjct: 931 NEDKRCRPILFHSDGPNAGDQE 952
Score = 117 bits (294), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 89/231 (38%), Positives = 125/231 (54%), Gaps = 26/231 (11%)
Query: 42 NNASNDASLFSSSLPVLPHEKLNFADSEHHDQSVDDSSPTLNKIDLENESNGPLAGVETI 101
N A N+ LFSSS+ + +KL + V S + K+DL + + P E I
Sbjct: 136 NGAYNENGLFSSSVSDIFDKKLRLTSK---NGLVGQS---IEKVDLNHVDDEPFELTEEI 189
Query: 102 GSLLPDDENDLL----AGLVDDFDLRGLPSQLEDLEDDLFDSGGGMELEFEPHESLSIGV 157
+ + + +G+VD+ + +D +DD+F +GGGMELE + ++
Sbjct: 190 EAQIIGNLLPDDDDLLSGVVDEVGYPTNANNRDDADDDIFYTGGGMELETDENK------ 243
Query: 158 SKLNISDGIAGTGIAHYPISNGVGTVAGEHPYGEHPSRTLFVRNINSNVEDLELRSLFEQ 217
KL +G A GI + NGV + GEH Y E PSRTLFVRNINSNVED EL+ LFE
Sbjct: 244 -KLQEFNGSANDGIG---LLNGV--LNGEHLYREQPSRTLFVRNINSNVEDSELKLLFEH 297
Query: 218 YGDIRTLYTACKHRGF----FYDVRAAEAALRALNRSDINGKRIKLEPSRP 264
+GDIR LYTACKHRGF +YD+R+A A L + +++ + S P
Sbjct: 298 FGDIRALYTACKHRGFVMISYYDIRSALNAKMELQNKALRRRKLDIHYSIP 348
>sp|Q75M35|OML3_ORYSJ Protein MEI2-like 3 OS=Oryza sativa subsp. japonica GN=ML3 PE=2
SV=2
Length = 955
Score = 303 bits (777), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 225/593 (37%), Positives = 313/593 (52%), Gaps = 90/593 (15%)
Query: 197 LFVRNINSNVEDLELRSLFEQYGDIRTLYTA---CKHRGF-FYDVRAAEAALRALNRSDI 252
L V NI+S++ + +L + YGD++ + ++ C + FYDVRAAE AL LN+ I
Sbjct: 357 LVVSNIDSSISNDDLLQMLSVYGDVKEISSSPISCTKKFVEFYDVRAAEEALHDLNKGGI 416
Query: 253 NGKRIKLEPSRPGGARRNLMQQLNQELEQDEARGFRHQVGSPVTNSPPGTWAQFGSPVER 312
+G + K+E S+ G A L QQ ++E +QD HQ NS PGT + G+ +
Sbjct: 417 SGPKFKVELSQHGEAGSCLRQQHSREWKQDS---LPHQ----PKNSSPGTIGKLGTKCQD 469
Query: 313 NPLHAFSKSPGLGTLSPINS---NPLHAFSKSTG---LATPTPVNSNHLPGLASILPPHL 366
N S SP+N +P S +TG L++P + S ++ +
Sbjct: 470 N-------STVHNLFSPVNQQLESPTQCIS-TTGPQILSSPIRIKS-------TLQHNNQ 514
Query: 367 SNTGKIA-PIGKDQ-GRANQT----------NHMFSNSASL-----QGAAYQHSQSFPEQ 409
++ G ++ P+G+ GR QT N + +NS S+ ++ Q Q
Sbjct: 515 ASVGDLSGPLGQGNFGRGIQTLHPRSLPEHHNRICNNSKSMTVSGRNASSRQDGVDHNIQ 574
Query: 410 KLSASPGPKSPFGESNS----NSSGVGTLSGPQFLWGSPPPYSERSSSSA-WPTSSVGHP 464
K+ + F ++N G L G + W + + S+ W S++ HP
Sbjct: 575 KVGPAGFCGHSFDQNNEAFGFTEIGSCPLHGYHYTWNHTNVFPQSPSAPILW--SNLQHP 632
Query: 465 FSSSGQGQGFPYGSRHGSFIGSHHQHHVGSAP-SGVSLDRNFGFFPESPETSFTNPVPLG 523
P+ GS+ QHH+GSAP +G S F P S LG
Sbjct: 633 MHVHSYPGVPPHMLNTGSY--PMDQHHLGSAPDNGGSFGNVHSFHPGS----------LG 680
Query: 524 GMGLSRNNAGYMMNVGG--------RVGVGLPLNVTDNGSPSLRMMSFPRHG--PLFFGN 573
+GL + Y + R + P+ G SL+ M +G P+ +
Sbjct: 681 SIGLHGSPQLYPSELSAFASSRGNFREALFSPVG---GGFQSLQQMCNAINGRNPMIHVS 737
Query: 574 GSYSGLGTTSNEAFTERGRTRRVENCGSQVDSKKQYQLDLDKIISGEDTRTTLMIKNIPN 633
SY +A +R R+RR + +Q ++K+Q++LD+D+I GED+RTTLMIKNIPN
Sbjct: 738 TSY--------DATNDRMRSRRHDGNPAQSENKRQFELDIDRIAKGEDSRTTLMIKNIPN 789
Query: 634 KYTSKMLLAAIDENHRGTYDFLYLPIDFKNKCNVGYAFINMVSPSHIISFYEAFNGKKWE 693
KY K+LLA IDENHRGTYDF+YLPIDFKNKCNVGYAFINM P HII FY+ FNGKKWE
Sbjct: 790 KYNCKLLLAVIDENHRGTYDFIYLPIDFKNKCNVGYAFINMTDPQHIIPFYKTFNGKKWE 849
Query: 694 KFNSEKVASLAYARIQGQAALVTHFQNSSLMNEDKRCRPIVFHSEGQETSDQE 746
KFNSEKVASLAYARIQG++AL+ HFQNSSLMNEDK CRP++FH +G DQE
Sbjct: 850 KFNSEKVASLAYARIQGRSALIAHFQNSSLMNEDKWCRPMLFHKDGPNAGDQE 902
Score = 108 bits (269), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 70/184 (38%), Positives = 108/184 (58%), Gaps = 27/184 (14%)
Query: 90 ESNGPLAGVE-----TIGSLLPDDENDLLAGLVDDFDLRGLPSQLEDLEDDLFDSGGGME 144
+S+ PL +E TIG LLPDD++DL++G+ D F+ G+ + +D ++D+F +GGGME
Sbjct: 178 DSDEPLESMEAIEAQTIGDLLPDDDDDLISGIADGFEFTGMSTNQDDADEDIFCTGGGME 237
Query: 145 LEFEPHESLSIGVSKLNISDGIAGTGIAHYPISNGVGTVAGEHPYGEHPSRTLFVRNINS 204
LE +D + G + + ++ H + PSRTL VRNI +
Sbjct: 238 LEN---------------NDSVKGDKVQDGSFKS---QISSGHSINKQPSRTLVVRNITA 279
Query: 205 NVEDLELRSLFEQYGDIRTLYTACKHRGF----FYDVRAAEAALRALNRSDINGKRIKLE 260
N+ED +L LF+QYGDIR LYT+ KH GF +YD+RAA+ A+RAL+ + ++ ++
Sbjct: 280 NIEDSDLTVLFQQYGDIRMLYTSFKHHGFVTVSYYDIRAAQNAMRALHSKPLGLMKLDVQ 339
Query: 261 PSRP 264
S P
Sbjct: 340 FSFP 343
>sp|Q9LYN7|AML4_ARATH Protein MEI2-like 4 OS=Arabidopsis thaliana GN=ML4 PE=1 SV=1
Length = 907
Score = 287 bits (734), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 230/642 (35%), Positives = 310/642 (48%), Gaps = 81/642 (12%)
Query: 182 TVAGEHPYGEHPSRTLFVRNINSNVEDLELRSLFEQYGDIR----TLYTACKHRGFFYDV 237
++ E+P L+V N++S++ + EL +F YG+IR T++ + F+DV
Sbjct: 282 SIPKENPKENSSEGALWVNNLDSSISNEELHGIFSSYGEIREVRRTMHENSQVYIEFFDV 341
Query: 238 RAAEAALRALNRSDINGKRIKLEPSRPGGARRNLMQQLNQELEQDEARGFRHQVGSPVTN 297
R A+ AL+ LN ++ G+++KL P+ P G + D+ G
Sbjct: 342 RKAKVALQGLNGLEVAGRQLKLAPTCPEGT------SFWPQFASDDGEG----------G 385
Query: 298 SPPGTWAQFGSPVERNPLHAFSKSPGLGTLSPINSNPLHAFSKSTGLATPTPVNSNHLPG 357
P + S H PG+ + I+ + S G + + +
Sbjct: 386 LPKMAFNNLSS------AHMGRHFPGILASTSIDGGSIRGMHNSVGSPMNSFIERHQSLD 439
Query: 358 LASILPPHLSNTGKIAPIGKD-------------QGRANQTNHM---FSNSASLQGAAYQ 401
+ LPP P+G Q N H N AS G+ Y+
Sbjct: 440 VPIGLPPSARVISASKPVGLQEFGNPFDNSKTGIQSMPNLHPHFPDYLDNFAS--GSPYK 497
Query: 402 HSQSFPEQKLSASPGPKSPFGESNSNSSGV----------------GTLSGPQFLWG-SP 444
S +F E S G K+ G SN GV G+ G LW S
Sbjct: 498 SSTTFSEM---VSDGQKANEGFMMSNVRGVGVDGFNGGVIGSPINQGSHRGNLNLWSNSN 554
Query: 445 PPYSERSSSSAWPTSSV---GHPFSSSGQGQGFPYGSRHGSFIGSHHQHH-VGSAPSGVS 500
+SS WP S G P F S + S HH +GSAP S
Sbjct: 555 SQQHNQSSGMMWPNSPSRVNGVPSQRIPPVTAFSRASPLMVNMASSPVHHHIGSAPVLNS 614
Query: 501 --LDRNFGFFPESPETSFTNPVPLGGMGLSRNNAGYMMNVGG-RVGVGLPLNVTDNGSPS 557
DR + ESPE+S + G MG ++ + M+ G +V + N + S +
Sbjct: 615 PFWDRRQAYVAESPESSGFHLGSPGSMGFPGSSPSHPMDFGSHKVFSHVGGNRMEANSKN 674
Query: 558 LRMMSFPRHGPLFFGNG---SYSGLGTTSNEAFTERGRTRRVENCGSQVDSKKQYQLDLD 614
+ S + LF G S SG NE + R + R S KK Y+LD+D
Sbjct: 675 AVLRSSRQMPHLFTGRSPMLSVSGSFDLPNERY--RNLSHRRSESNSSNAEKKLYELDVD 732
Query: 615 KIISGEDTRTTLMIKNIPNKYTSKMLLAAIDENHRGTYDFLYLPIDFKNKCNVGYAFINM 674
+I+ GED+RTTLMIKNIPNKYTSKMLLAAIDE +GTYDFLYLPIDFKNKCNVGYAFIN+
Sbjct: 733 RILRGEDSRTTLMIKNIPNKYTSKMLLAAIDEYCKGTYDFLYLPIDFKNKCNVGYAFINL 792
Query: 675 VSPSHIISFYEAFNGKKWEKFNSEKVASLAYARIQGQAALVTHFQNSSLMNEDKRCRPIV 734
+ P +I+ FY+AFNGKKWEKFNSEKVASLAY RIQG++AL+ HFQNSSLMNEDKRCRPI+
Sbjct: 793 IEPENIVPFYKAFNGKKWEKFNSEKVASLAYGRIQGKSALIAHFQNSSLMNEDKRCRPIL 852
Query: 735 FHSEGQETSDQEAL-LSSNLNIFIRQPDGSYSGDSLESLNGY 775
FH+ G DQE + SN IR G + +S+E+ +
Sbjct: 853 FHTAGPNAGDQEPFPMGSN----IRSRPGKHRTNSIENYTNF 890
Score = 102 bits (253), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 72/172 (41%), Positives = 105/172 (61%), Gaps = 23/172 (13%)
Query: 98 VETIGSLLPDDENDLLAGLVDDFDLRGLPSQLEDLEDDL-FDSGGGMELEFEPHESLSIG 156
+TIG+LLPD E+DL A +V + + + +DL+D F S GGMEL+ + S+S
Sbjct: 131 AQTIGNLLPD-EDDLFAEVVGEGVHKSRANGGDDLDDCDLFSSVGGMELDGDVFSSVSQ- 188
Query: 157 VSKLNISDGIAGTGIAHYPISNGVGTVAGEHPYGEHPSRTLFVRNINSNVEDLELRSLFE 216
DG G+ ++ TVA EHP GE SR LFVRN++S++ED EL LF+
Sbjct: 189 ------RDGKRGSNVS---------TVA-EHPQGEILSRILFVRNVDSSIEDCELGVLFK 232
Query: 217 QYGDIRTLYTACKHRGF----FYDVRAAEAALRALNRSDINGKRIKLEPSRP 264
Q+GD+R L+TA K+RGF +YD+RAA+ A RAL+ + G+++ + S P
Sbjct: 233 QFGDVRALHTAGKNRGFIMVSYYDIRAAQKAARALHGRLLRGRKLDIRYSIP 284
>sp|Q8W4I9|AML1_ARATH Protein MEI2-like 1 OS=Arabidopsis thaliana GN=ML1 PE=1 SV=1
Length = 915
Score = 276 bits (707), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 225/642 (35%), Positives = 314/642 (48%), Gaps = 85/642 (13%)
Query: 182 TVAGEHPYGEHPSR-TLFVRNINSNVEDLELRSLFEQYGDI----RTLYTACKHRGFFYD 236
+++ E+P + S+ L V N++S++ + EL L + YG++ RT++ + F+D
Sbjct: 288 SISKENPSQKDTSKGALLVNNLDSSISNQELNRLVKSYGEVKEIRRTMHDNSQIYIEFFD 347
Query: 237 VRAAEAALRALNRSDINGKRIKLEPSRPGGARRNLMQQLNQELEQDEARGFRHQVGSPVT 296
VRAA AAL LN ++ GK+++L P+ P G R + ++ G + T
Sbjct: 348 VRAAAAALGGLNGLEVAGKKLQLVPTYPEGTR------YTSQCAANDTEGCLPKTSYSNT 401
Query: 297 NSPPGTWAQFGSPVERNPLHAFSKSPGLGTLSPINSNPLHAFSKSTGLATPTPVNSNHLP 356
+S H PG+ + + + + S G + + +
Sbjct: 402 SSG----------------HIGRHFPGMISSTSSDGGSMRVIHNSIGSPVNSFIERHRSL 445
Query: 357 GLASILPPHLSNTGKIAPIGKDQGRANQTNHMFSNS-ASLQGAAYQHSQSFPEQK---LS 412
+ PP + P+G + H F NS +Q H SF E +
Sbjct: 446 SIPIGFPPSANGISASKPVG-----LQEHGHHFDNSNMGIQSMPNLHPHSFSEYVDNFAN 500
Query: 413 ASPGPKSPFGESNSNSS------------GVGTLSGPQFLWGSPPPYSERSSSSAWPTSS 460
SP S F E S+ S GV SG GSP S R + W S+
Sbjct: 501 GSPYTSSAFSEMVSDGSKANEGFMIHNVRGVEGFSGGGI--GSPMHQSSRRPINLWSNSN 558
Query: 461 VGHPFSSSGQGQGFPYGSRHGSFIGSHH---------------------QHHVGSAPSGV 499
SS G +P H + I + HH+GSAP
Sbjct: 559 TQQQNPSS--GMMWPNSPSHINSIPTQRPPVTVFSRAPPIMVNMASSPVHHHIGSAPVLN 616
Query: 500 S--LDRNFGFFPESPETSFTNPVPLGGMGLSRNNAGYMMNVGGRVGVGLPLNVTDNGSPS 557
S DR + ES E+S + G MG+ ++ + M++G + N D S +
Sbjct: 617 SPFWDRRQAYVAESLESSGFHIGSHGSMGIPGSSPSHPMDIGSHKTFSVGGNRMDVNSQN 676
Query: 558 LRMMSFPRHGPLFFGN---GSYSGLGTTSNEAFTERGRTRRVENCGSQVDSKKQYQLDLD 614
+ S + LF G GS G + NE + R + R S KK Y+LD+D
Sbjct: 677 AVLRSPQQLSHLFPGRSPMGSMPGSFDSPNERY--RNLSHRRSESSSSNADKKLYELDVD 734
Query: 615 KIISGEDTRTTLMIKNIPNKYTSKMLLAAIDENHRGTYDFLYLPIDFKNKCNVGYAFINM 674
+I+ GED RTTLMIKNIPNKYTSKMLL+AIDE+ +GTYDFLYLPIDFKNKCNVGYAFIN+
Sbjct: 735 RILRGEDRRTTLMIKNIPNKYTSKMLLSAIDEHCKGTYDFLYLPIDFKNKCNVGYAFINL 794
Query: 675 VSPSHIISFYEAFNGKKWEKFNSEKVASLAYARIQGQAALVTHFQNSSLMNEDKRCRPIV 734
+ P I+ F++AFNGKKWEKFNSEKVA+L YARIQG+ AL+ HFQNSSLMNEDKRCRPI+
Sbjct: 795 IEPEKIVPFFKAFNGKKWEKFNSEKVATLTYARIQGKTALIAHFQNSSLMNEDKRCRPIL 854
Query: 735 FHSEGQETSDQEAL-LSSNLNIFIRQPDGSYSGDSLESLNGY 775
FH++G DQE + SN IR G S+++ N +
Sbjct: 855 FHTDGPNAGDQEPFPMGSN----IRSRPGKPRSSSIDNYNSF 892
Score = 110 bits (275), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 69/170 (40%), Positives = 96/170 (56%), Gaps = 24/170 (14%)
Query: 98 VETIGSLLPDDENDLLAGLVDDFDLRGLPSQLEDLED-DLFDSGGGMELEFEPHESLSIG 156
+TIG+LLPD E+DL A + + + + ++L++ DLF S GGMEL
Sbjct: 138 AQTIGNLLPD-EDDLFAEVTGEVGRKSRANTGDELDEFDLFSSVGGMEL----------- 185
Query: 157 VSKLNISDGIAGTGIAHYPISNGVGTVAGEHPYGEHPSRTLFVRNINSNVEDLELRSLFE 216
DG + ++H G GE GE PSRTL V NI+SNVED EL+ LFE
Sbjct: 186 -------DGDIFSSVSHRNGERGGNNSVGELNRGEIPSRTLLVGNISSNVEDYELKVLFE 238
Query: 217 QYGDIRTLYTACKHRGF----FYDVRAAEAALRALNRSDINGKRIKLEPS 262
Q+GDI+ L+TACK+RGF + D+RAA+ A RAL + G ++ + S
Sbjct: 239 QFGDIQALHTACKNRGFIMVSYCDIRAAQNAARALQNKLLRGTKLDIRYS 288
>sp|P08965|MEI2_SCHPO Meiosis protein mei2 OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=mei2 PE=1 SV=1
Length = 750
Score = 154 bits (390), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 71/129 (55%), Positives = 93/129 (72%)
Query: 611 LDLDKIISGEDTRTTLMIKNIPNKYTSKMLLAAIDENHRGTYDFLYLPIDFKNKCNVGYA 670
+D +I SG DTRTT+MIKNIPNK+T +ML ID ++GTYDFLYL IDF NKCNVGYA
Sbjct: 584 VDYAQIASGIDTRTTVMIKNIPNKFTQQMLRDYIDVTNKGTYDFLYLRIDFVNKCNVGYA 643
Query: 671 FINMVSPSHIISFYEAFNGKKWEKFNSEKVASLAYARIQGQAALVTHFQNSSLMNEDKRC 730
FIN + P II+F +A G +W F+SEK+ ++YA IQG+ L+ F+NS +M+E+
Sbjct: 644 FINFIEPQSIITFGKARVGTQWNVFHSEKICDISYANIQGKDRLIEKFRNSCVMDENPAY 703
Query: 731 RPIVFHSEG 739
RP +F S G
Sbjct: 704 RPKIFVSHG 712
>sp|Q0JGS5|EAR1_ORYSJ Protein terminal ear1 homolog OS=Oryza sativa subsp. japonica
GN=PLA2 PE=2 SV=1
Length = 683
Score = 134 bits (337), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 64/136 (47%), Positives = 83/136 (61%), Gaps = 19/136 (13%)
Query: 618 SGEDTRTTLMIKNIPNKYTSKMLLAAIDENHR------------------GTYDFLYLPI 659
S +DTRTT+MI+NIPNKY+ K+LL +D NH +YDFLYLPI
Sbjct: 452 SCKDTRTTVMIRNIPNKYSQKLLLNMLD-NHCILSNQQIEASCEDEAQPFSSYDFLYLPI 510
Query: 660 DFKNKCNVGYAFINMVSPSHIISFYEAFNGKKWEKFNSEKVASLAYARIQGQAALVTHFQ 719
DF NKCNVGY F+N+ SP + Y+AF+ + WE FNS K+ + YAR+QG AL HF+
Sbjct: 511 DFNNKCNVGYGFVNLTSPEAAVRLYKAFHKQPWEVFNSRKICQVTYARVQGLDALKEHFK 570
Query: 720 NSSLMNEDKRCRPIVF 735
NS + P+VF
Sbjct: 571 NSKFPCDSDEYLPVVF 586
Score = 42.7 bits (99), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 43/81 (53%), Gaps = 7/81 (8%)
Query: 196 TLFVRNINSNVEDLELRSLFEQYGDIRTLYTACKH--RGF--FYDVRAAEAALRALNRSD 251
+L V N + ELR +F+ YGD++ + + F F+D R A+ AL LN +
Sbjct: 223 SLVVLNSLPAMSVFELREIFQAYGDVKDVRESALRPSNKFVEFFDTRDADRALHELNGKE 282
Query: 252 INGKRIKLE---PSRPGGARR 269
+ G+R+ +E PS PG RR
Sbjct: 283 LFGRRLVVEYTRPSLPGPRRR 303
>sp|A2WY46|EAR1_ORYSI Protein terminal ear1 homolog OS=Oryza sativa subsp. indica GN=PLA2
PE=2 SV=1
Length = 680
Score = 134 bits (337), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 64/136 (47%), Positives = 83/136 (61%), Gaps = 19/136 (13%)
Query: 618 SGEDTRTTLMIKNIPNKYTSKMLLAAIDENHR------------------GTYDFLYLPI 659
S +DTRTT+MI+NIPNKY+ K+LL +D NH +YDFLYLPI
Sbjct: 449 SCKDTRTTVMIRNIPNKYSQKLLLNMLD-NHCILSNQQIEASCEDEAQPFSSYDFLYLPI 507
Query: 660 DFKNKCNVGYAFINMVSPSHIISFYEAFNGKKWEKFNSEKVASLAYARIQGQAALVTHFQ 719
DF NKCNVGY F+N+ SP + Y+AF+ + WE FNS K+ + YAR+QG AL HF+
Sbjct: 508 DFNNKCNVGYGFVNLTSPEAAVRLYKAFHKQPWEVFNSRKICQVTYARVQGLDALKEHFK 567
Query: 720 NSSLMNEDKRCRPIVF 735
NS + P+VF
Sbjct: 568 NSKFPCDSDEYLPVVF 583
Score = 42.7 bits (99), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 43/81 (53%), Gaps = 7/81 (8%)
Query: 196 TLFVRNINSNVEDLELRSLFEQYGDIRTLYTACKH--RGF--FYDVRAAEAALRALNRSD 251
+L V N + ELR +F+ YGD++ + + F F+D R A+ AL LN +
Sbjct: 223 SLVVLNSLPAMSVFELREIFQAYGDVKDVRESALRPSNKFVEFFDTRDADRALHELNGKE 282
Query: 252 INGKRIKLE---PSRPGGARR 269
+ G+R+ +E PS PG RR
Sbjct: 283 LFGRRLVVEYTRPSLPGPRRR 303
>sp|O65001|TE1_MAIZE Protein terminal ear1 OS=Zea mays GN=TE1 PE=2 SV=1
Length = 656
Score = 132 bits (331), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 62/141 (43%), Positives = 84/141 (59%), Gaps = 17/141 (12%)
Query: 621 DTRTTLMIKNIPNKYTSKMLLAAID---------------ENHRGTYDFLYLPIDFKNKC 665
DTRTT+MI+NIPNKY+ K+LL +D E YDF+YLPIDF NKC
Sbjct: 438 DTRTTVMIRNIPNKYSQKLLLNMLDNHCIQSNEWIVASGEEQPFSAYDFVYLPIDFNNKC 497
Query: 666 NVGYAFINMVSPSHIISFYEAFNGKKWEKFNSEKVASLAYARIQGQAALVTHFQNSSLMN 725
NVGY F+N+ SP + Y+AF+ + WE +NS K+ + YAR+QG AL HF+NS
Sbjct: 498 NVGYGFVNLTSPEARVRLYKAFHKQPWEVYNSRKICQVTYARVQGLEALKEHFKNSKFPC 557
Query: 726 EDKRCRPIVFH--SEGQETSD 744
+ P+ F +G+E +D
Sbjct: 558 DSDEYLPVAFSPARDGKELTD 578
Score = 39.3 bits (90), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 42/75 (56%), Gaps = 4/75 (5%)
Query: 196 TLFVRNINSNVEDLELRSLFEQYGDIRTLYTACK---HRGF-FYDVRAAEAALRALNRSD 251
+L V + V +LR +F+ +GD++ + + + H+ F+D R A AL LN +
Sbjct: 211 SLVVLSPLPGVSVADLRQVFQAFGDLKDVRESAQRPSHKFVDFFDTRDAARALAELNGQE 270
Query: 252 INGKRIKLEPSRPGG 266
+ G+R+ +E +RP G
Sbjct: 271 LFGRRLVVEFTRPSG 285
>sp|Q652K6|OML6_ORYSJ Protein MEI2-like 6 OS=Oryza sativa subsp. japonica GN=ML6 PE=2
SV=1
Length = 323
Score = 80.5 bits (197), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 45/133 (33%), Positives = 61/133 (45%), Gaps = 19/133 (14%)
Query: 622 TRTTLMIKNIPNKYTSKMLLAAIDENH-------------------RGTYDFLYLPIDFK 662
T T+LMI+NIPNK+ L+A +D++ + YDF Y+PIDFK
Sbjct: 168 TTTSLMIRNIPNKFLKARLMAILDQHCADENGKCHRRGGGGGRSVVKSEYDFFYVPIDFK 227
Query: 663 NKCNVGYAFINMVSPSHIISFYEAFNGKKWEKFNSEKVASLAYARIQGQAALVTHFQNSS 722
N GYAF+NM + + +W+ S KV + A IQG A V HF S
Sbjct: 228 TGFNKGYAFVNMTTATAARRLRAFLQDHRWDAAMSGKVCDVVPAAIQGLDAFVAHFSASC 287
Query: 723 LMNEDKRCRPIVF 735
K P+ F
Sbjct: 288 FPCRTKEFLPVWF 300
>sp|Q6ET49|OML7_ORYSJ Protein MEI2-like 7 OS=Oryza sativa subsp. japonica GN=OML7 PE=2
SV=1
Length = 389
Score = 69.7 bits (169), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 64/124 (51%), Gaps = 20/124 (16%)
Query: 624 TTLMIKNIPNKYTSKMLLAAIDEN-------------HRGTYDFLYLPIDF-----KNKC 665
TT+M++NIPNK T ++ +D++ R YD +Y+ +DF +
Sbjct: 216 TTVMVRNIPNKLTRSDMVRLLDDHCARENRRRGRGGEPRAEYDLVYVRMDFGMCNKERSS 275
Query: 666 NVGYAFINMVSPSHIISFYEAFNGKKWEK--FNSEKVASLAYARIQGQAALVTHFQNSSL 723
N+GYAF+N + A +G +W++ F+S K+ + ARIQG+ ALV HF ++
Sbjct: 276 NMGYAFVNFTTAEAARGLQRALHGCRWKRSAFDSGKIIDIRAARIQGKDALVRHFGRTTY 335
Query: 724 MNED 727
D
Sbjct: 336 YECD 339
>sp|Q6NZZ9|RBM22_DANRE Pre-mRNA-splicing factor RBM22 OS=Danio rerio GN=rbm22 PE=2 SV=1
Length = 425
Score = 48.5 bits (114), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 59/116 (50%), Gaps = 11/116 (9%)
Query: 161 NISDGIAGTGIAHYPISNGVGTVAGEHPYGEHPS----RTLFVRNINSNVEDLELRSLFE 216
NI D G + P++N + A P + P TL++ + NV D ELR+ F
Sbjct: 197 NIKDRYYGI---NDPVANKLLMRASTMPRLDVPDDKSITTLYIGGLGENVTDSELRNHFY 253
Query: 217 QYGDIRTLYTACKHRGFFYDV---RAAE-AALRALNRSDINGKRIKLEPSRPGGAR 268
Q+G+IRT+ + + F +AAE AA ++ N+ ING+R+ ++ R AR
Sbjct: 254 QFGEIRTITIVQRQQCAFIQFATRQAAETAAEKSFNKLIINGRRLNVKWGRSQAAR 309
>sp|Q9R0U0|SRS10_MOUSE Serine/arginine-rich splicing factor 10 OS=Mus musculus GN=Srsf10
PE=1 SV=2
Length = 262
Score = 46.2 bits (108), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 44/81 (54%), Gaps = 9/81 (11%)
Query: 189 YGEHPSRTLFVRNINSNVEDLELRSLFEQYGDIRTLYT-----ACKHRGFFY----DVRA 239
Y P+ +LFVRN+ + +LR F +YG I +Y + RGF Y DVR
Sbjct: 4 YLRPPNTSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRD 63
Query: 240 AEAALRALNRSDINGKRIKLE 260
AE AL L+R I G++I+++
Sbjct: 64 AEDALHNLDRKWICGRQIEIQ 84
>sp|O75494|SRS10_HUMAN Serine/arginine-rich splicing factor 10 OS=Homo sapiens GN=SRSF10
PE=1 SV=1
Length = 262
Score = 46.2 bits (108), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 44/81 (54%), Gaps = 9/81 (11%)
Query: 189 YGEHPSRTLFVRNINSNVEDLELRSLFEQYGDIRTLYT-----ACKHRGFFY----DVRA 239
Y P+ +LFVRN+ + +LR F +YG I +Y + RGF Y DVR
Sbjct: 4 YLRPPNTSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRD 63
Query: 240 AEAALRALNRSDINGKRIKLE 260
AE AL L+R I G++I+++
Sbjct: 64 AEDALHNLDRKWICGRQIEIQ 84
>sp|Q8WXF0|SRS12_HUMAN Serine/arginine-rich splicing factor 12 OS=Homo sapiens GN=SRSF12
PE=2 SV=1
Length = 261
Score = 45.8 bits (107), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 43/81 (53%), Gaps = 9/81 (11%)
Query: 189 YGEHPSRTLFVRNINSNVEDLELRSLFEQYGDIRTLYT-----ACKHRGFFY----DVRA 239
Y P+ +LF+RN+ +LR F +YG I +Y + RGF Y DVR
Sbjct: 4 YTRPPNTSLFIRNVADATRPEDLRREFGRYGPIVDVYIPLDFYTRRPRGFAYVQFEDVRD 63
Query: 240 AEAALRALNRSDINGKRIKLE 260
AE AL LNR + G++I+++
Sbjct: 64 AEDALYNLNRKWVCGRQIEIQ 84
>sp|P21187|PABP_DROME Polyadenylate-binding protein OS=Drosophila melanogaster GN=pAbp
PE=1 SV=3
Length = 634
Score = 45.1 bits (105), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 74/159 (46%), Gaps = 15/159 (9%)
Query: 134 DDLFDSGGGMELEFEPHESLSIGVSKLNISDGIAGTGIAHYPISNGVGTVAGEHPYGEHP 193
D+ +S G + FE E+ + + K+N G+ G Y + + E GE
Sbjct: 124 DEKGNSKGYGFVHFETEEAANTSIDKVN---GMLLNGKKVY-VGKFIPRKEREKELGEKA 179
Query: 194 S--RTLFVRNINSNVEDLELRSLFEQYGDIRTLYTACKH----RGF----FYDVRAAEAA 243
++V+N + +D +L+ FE YG I + K +GF F AAEAA
Sbjct: 180 KLFTNVYVKNFTEDFDDEKLKEFFEPYGKITSYKVMSKEDGKSKGFGFVAFETTEAAEAA 239
Query: 244 LRALNRSDI-NGKRIKLEPSRPGGARRNLMQQLNQELEQ 281
++ALN D+ GK + + ++ R+ +++ +EL+Q
Sbjct: 240 VQALNGKDMGEGKSLYVARAQKKAERQQELKRKFEELKQ 278
>sp|A4QUF0|PABP_MAGO7 Polyadenylate-binding protein, cytoplasmic and nuclear
OS=Magnaporthe oryzae (strain 70-15 / ATCC MYA-4617 /
FGSC 8958) GN=PAB1 PE=3 SV=1
Length = 762
Score = 43.9 bits (102), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 52/101 (51%), Gaps = 9/101 (8%)
Query: 197 LFVRNINSNVEDLELRSLFEQYGDIRTLYTA-----CKHRGF----FYDVRAAEAALRAL 247
++V+NIN V D E R+LFE+YGD+ + A K RGF F A A++ L
Sbjct: 244 IYVKNINPEVTDDEFRTLFEKYGDVTSSSLARDQETGKSRGFGFVNFTSHEDASKAVQEL 303
Query: 248 NRSDINGKRIKLEPSRPGGARRNLMQQLNQELEQDEARGFR 288
N + +G+ + + ++ R +++ + Q++A ++
Sbjct: 304 NEKEFHGQNLYVGRAQKKHEREEELRKSYEAARQEKASKYQ 344
>sp|Q18409|RSP6_CAEEL Probable splicing factor, arginine/serine-rich 6 OS=Caenorhabditis
elegans GN=rsp-6 PE=3 SV=1
Length = 179
Score = 43.9 bits (102), Expect = 0.005, Method: Composition-based stats.
Identities = 26/70 (37%), Positives = 42/70 (60%), Gaps = 4/70 (5%)
Query: 197 LFVRNINSNVEDLELRSLFEQYGDIRTLYTACKHRGFFY----DVRAAEAALRALNRSDI 252
++V + S+ EL +F+++G IR ++ A + GF + DVR AE A+RAL+ S I
Sbjct: 5 VYVGGLPSDATSQELEEIFDRFGRIRKVWVARRPPGFAFVEYDDVRDAEDAVRALDGSRI 64
Query: 253 NGKRIKLEPS 262
G R ++E S
Sbjct: 65 CGVRARVELS 74
>sp|Q8LPQ9|FPA_ARATH Flowering time control protein FPA OS=Arabidopsis thaliana GN=FPA
PE=2 SV=2
Length = 901
Score = 43.9 bits (102), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 44/82 (53%), Gaps = 5/82 (6%)
Query: 194 SRTLFVRNINSNVEDLELRSLFEQYGDIRTLYTACKHRGF----FYDVRAAEAALRALNR 249
S L+V ++ + +L LF +YGDI + T RGF + V A AA AL
Sbjct: 17 SNNLWVGSLTPETTESDLTELFGRYGDIDRI-TVYSSRGFAFIYYRHVEEAVAAKEALQG 75
Query: 250 SDINGKRIKLEPSRPGGARRNL 271
+++NG +IK+E +RP ++L
Sbjct: 76 ANLNGSQIKIEYARPAKPCKSL 97
>sp|Q9FPJ8|RB45A_ARATH Polyadenylate-binding protein RBP45A OS=Arabidopsis thaliana
GN=RBP45A PE=2 SV=1
Length = 387
Score = 43.1 bits (100), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 42/71 (59%), Gaps = 3/71 (4%)
Query: 196 TLFVRNINSNVEDLELRSLFEQYGDIRTLYTACKHR-GF--FYDVRAAEAALRALNRSDI 252
T+FV +++NV D EL+S+F Q+G++ + R GF + + +AE AL LN + +
Sbjct: 261 TIFVGGLDANVTDDELKSIFGQFGELLHVKIPPGKRCGFVQYANKASAEHALSVLNGTQL 320
Query: 253 NGKRIKLEPSR 263
G+ I+L R
Sbjct: 321 GGQSIRLSWGR 331
>sp|Q9SAB3|RB45B_ARATH Polyadenylate-binding protein RBP45B OS=Arabidopsis thaliana
GN=RBP45B PE=1 SV=1
Length = 405
Score = 43.1 bits (100), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 40/71 (56%), Gaps = 3/71 (4%)
Query: 196 TLFVRNINSNVEDLELRSLFEQYGDIRTLYT-ACKHRGF--FYDVRAAEAALRALNRSDI 252
T+FV ++++V D L+++F QYG+I + A K GF F + AE ALR LN +
Sbjct: 262 TVFVGGLDASVTDDHLKNVFSQYGEIVHVKIPAGKRCGFVQFSEKSCAEEALRMLNGVQL 321
Query: 253 NGKRIKLEPSR 263
G ++L R
Sbjct: 322 GGTTVRLSWGR 332
>sp|Q9LEB3|RBP47_NICPL Polyadenylate-binding protein RBP47 OS=Nicotiana plumbaginifolia
GN=RBP47 PE=1 SV=1
Length = 428
Score = 42.7 bits (99), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 49/90 (54%), Gaps = 4/90 (4%)
Query: 177 SNGVGTVAGEHPYGEHPSRTLFVRNINSNVEDLELRSLFEQYGDIRTLYT-ACKHRGF-- 233
SNG T G G+ + T+FV ++S V D ELR F Q+G++ ++ A K GF
Sbjct: 278 SNGAAT-HGSQSDGDSSNTTIFVGGLDSEVTDEELRQSFNQFGEVVSVKIPAGKGCGFVQ 336
Query: 234 FYDVRAAEAALRALNRSDINGKRIKLEPSR 263
F D +A+ A++ L+ + I + ++L R
Sbjct: 337 FSDRSSAQEAIQKLSGAIIGKQAVRLSWGR 366
>sp|Q6BI95|PABP_DEBHA Polyadenylate-binding protein, cytoplasmic and nuclear
OS=Debaryomyces hansenii (strain ATCC 36239 / CBS 767 /
JCM 1990 / NBRC 0083 / IGC 2968) GN=PAB1 PE=3 SV=2
Length = 627
Score = 42.7 bits (99), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 52/92 (56%), Gaps = 11/92 (11%)
Query: 197 LFVRNINSNVEDLELRSLFEQYGDIRTLYTACKH----RGF-FYDVRAAEAALRA---LN 248
++ +NI+ + + E + LFE YG I ++Y H +GF F + E+A++A LN
Sbjct: 234 VYAKNIDLDFSEEEFKKLFEAYGKITSIYLEKDHEGKSKGFGFVNFENHESAVKAVDELN 293
Query: 249 RSDINGKRIKLEPSRPGGARRNLMQQLNQELE 280
+ING++I + ++ +R +++L ++ E
Sbjct: 294 DKEINGQKIYVGRAQ---KKRERLEELKKQYE 322
>sp|Q9ZW36|C3H25_ARATH Zinc finger CCCH domain-containing protein 25 OS=Arabidopsis
thaliana GN=At2g29580 PE=2 SV=1
Length = 483
Score = 42.7 bits (99), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 40/124 (32%), Positives = 59/124 (47%), Gaps = 12/124 (9%)
Query: 150 HESLSIG-VSKLNISDGIAGTGIAHYPISNGVGTVAGEHPYGEHPS----RTLFVRNINS 204
HE G +S+ NI D G P++ + AGE E P RTL+V +NS
Sbjct: 181 HEMPETGELSQQNIKDRYYGVND---PVALKLLGKAGEMGTLESPEDQSIRTLYVGGLNS 237
Query: 205 NVEDLELRSLFEQYGDIRTLYTACKHRGFF--YDVR--AAEAALRALNRSDINGKRIKLE 260
V + ++R F +G+I ++ + F Y R A +AA NR +NG+R+KL
Sbjct: 238 RVLEQDIRDQFYAHGEIESIRILAEKACAFVTYTTREGAEKAAEELSNRLVVNGQRLKLT 297
Query: 261 PSRP 264
RP
Sbjct: 298 WGRP 301
>sp|Q54BM2|PAP1A_DICDI Polyadenylate-binding protein 1-A OS=Dictyostelium discoideum
GN=pabpc1A PE=1 SV=1
Length = 565
Score = 42.7 bits (99), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 66/134 (49%), Gaps = 19/134 (14%)
Query: 197 LFVRNINSNVEDLELRSLFEQYGDIRTLYT-----ACKHRGF-FYDVRAAEAALRALNRS 250
L+++NI+ ++++ +LR +F Q+G I + A +GF F A + A RA+ +
Sbjct: 286 LYIKNIDDSIDNDKLREVFSQFGTITSAIVMKDDKATTSKGFGFVCYTAPDEATRAV--T 343
Query: 251 DINGKRIKLEPSRPGGARRNLMQ--QLNQELEQDEARGFRHQVGSPVTNSPP--GTWAQF 306
++NG+ I +P A+R ++ QL + +Q G R Q+ PP G+ F
Sbjct: 344 EMNGRMIGTKPLYVALAQRKDIRRAQLEMQHQQKFKTGIRQQM-------PPTYGSGPVF 396
Query: 307 GSPVERNPLHAFSK 320
+P NP + +
Sbjct: 397 FTPAPVNPQVVYQQ 410
Score = 34.3 bits (77), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 69/165 (41%), Gaps = 18/165 (10%)
Query: 115 GLVDDFDLRGLPSQLEDLEDDLFDSGGGMELEFEPHESLSIGVSKLNISDGIAGTGIAHY 174
L D F G + + DD S G + +E ES ++K+N G+ G +
Sbjct: 113 ALYDTFSAFGNILSCKVVTDDGNSSKGFGFVHYETQESADKAIAKVN---GMMINGQKVF 169
Query: 175 PISNGVGTVAGEHPYG---EHPSRTLFVRNINSNVEDLELRSLFEQYGDIRTLYTAC--- 228
VG G E +F +N++ +V +L+ L +QYG+I +
Sbjct: 170 -----VGPFKSSKERGQPTEVKFTNVFFKNLSEDVGPDQLKELLQQYGEITNITIMADDK 224
Query: 229 -KHRGF-FYDVRAAEAALRALNRSDINGKRIKLEPSRPGGARRNL 271
K +GF F + +AEAA + NGK +P G A++ +
Sbjct: 225 GKSKGFGFANFESAEAAKNVVENE--NGKIFHGKPIYAGRAQKKI 267
>sp|A3LXL0|PABP_PICST Polyadenylate-binding protein, cytoplasmic and nuclear
OS=Scheffersomyces stipitis (strain ATCC 58785 / CBS
6054 / NBRC 10063 / NRRL Y-11545) GN=PAB1 PE=3 SV=1
Length = 632
Score = 42.7 bits (99), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 52/92 (56%), Gaps = 11/92 (11%)
Query: 197 LFVRNINSNVEDLELRSLFEQYGDIRTLY----TACKHRGF-FYDVRAAEAALRA---LN 248
++V+NI+ + +L+ LF YG I ++Y K +GF F + EAA++A LN
Sbjct: 235 IYVKNIDLEYSEEDLKKLFTPYGAITSIYLEKDAEGKSKGFGFVNYEGHEAAVKAVEELN 294
Query: 249 RSDINGKRIKLEPSRPGGARRNLMQQLNQELE 280
+ING++I + ++ +R M++L ++ E
Sbjct: 295 DKEINGQKIYVGRAQ---KKRERMEELKKQYE 323
>sp|Q9LNV5|C3H4_ARATH Zinc finger CCCH domain-containing protein 4 OS=Arabidopsis
thaliana GN=At1g07360 PE=2 SV=1
Length = 481
Score = 42.7 bits (99), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 61/132 (46%), Gaps = 13/132 (9%)
Query: 142 GMELEFEPHESLSIG-VSKLNISDGIAGTGIAHYPISNGVGTVAGEHPYGEHPS----RT 196
G E + HE G +S+ NI D G P++ + AGE E P +T
Sbjct: 174 GAECPYR-HEMPETGELSQQNIKDRYYGVND---PVAMKLLGKAGEMGTLESPDDESIKT 229
Query: 197 LFVRNINSNVEDLELRSLFEQYGDIRTLYT----ACKHRGFFYDVRAAEAALRALNRSDI 252
L+V +NS + + ++R F +G+I ++ AC + A +AA NR I
Sbjct: 230 LYVGGLNSRILEQDIRDQFYAHGEIESIRILADKACAFVTYTSREGAEKAAQELSNRLVI 289
Query: 253 NGKRIKLEPSRP 264
NG+R+KL RP
Sbjct: 290 NGQRLKLTWGRP 301
>sp|Q6P616|RBM22_XENTR Pre-mRNA-splicing factor RBM22 OS=Xenopus tropicalis GN=rbm22 PE=2
SV=1
Length = 417
Score = 42.4 bits (98), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 58/116 (50%), Gaps = 11/116 (9%)
Query: 161 NISDGIAGTGIAHYPISNGVGTVAGEHPYGEHPS----RTLFVRNINSNVEDLELRSLFE 216
NI D G + P+++ + A P + P TL+V + + + ELR+ F
Sbjct: 197 NIKDRYYGI---NDPVADKLLKRASTMPRLDPPEDKSITTLYVGGLGDTISESELRNHFY 253
Query: 217 QYGDIRTLYTACKHRGFFYDV---RAAE-AALRALNRSDINGKRIKLEPSRPGGAR 268
Q+G+IRT+ + + F +AAE AA ++ N+ +NG+R+ ++ R AR
Sbjct: 254 QFGEIRTITVVQRQQCAFIQFATRQAAEMAAEKSFNKLIVNGRRLNVKWGRSQAAR 309
>sp|Q5B630|PABP_EMENI Polyadenylate-binding protein, cytoplasmic and nuclear
OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 /
CBS 112.46 / NRRL 194 / M139) GN=pab1 PE=2 SV=2
Length = 732
Score = 42.4 bits (98), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 40/69 (57%), Gaps = 8/69 (11%)
Query: 197 LFVRNINSNVEDLELRSLFEQYGDIRTLY----TACKHRGF----FYDVRAAEAALRALN 248
++++NI+ VED E R LFE++G+I + + K RGF F +A+AA+ +N
Sbjct: 225 IYIKNIDPEVEDEEFRKLFEKFGEITSATLSRDSEGKSRGFGFVNFSTHESAQAAVEEMN 284
Query: 249 RSDINGKRI 257
++ +++
Sbjct: 285 DKEVRSQKL 293
>sp|Q7ZXB5|RBM22_XENLA Pre-mRNA-splicing factor RBM22 OS=Xenopus laevis GN=rbm22 PE=2 SV=1
Length = 417
Score = 42.4 bits (98), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 54/116 (46%), Gaps = 11/116 (9%)
Query: 161 NISDGIAGTGIAHYPISNGVGTVAGEHPYGEHPS----RTLFVRNINSNVEDLELRSLFE 216
NI D G + P+++ + A P + P TL+V + + + ELR+ F
Sbjct: 197 NIKDRFYGI---NDPVADKLLKRASTMPRLDPPEDKSITTLYVGGLGDTISESELRNHFY 253
Query: 217 QYGDIRTLYTA----CKHRGFFYDVRAAEAALRALNRSDINGKRIKLEPSRPGGAR 268
Q+G+IRT+ C F A AA ++ N+ +NG+R+ ++ R AR
Sbjct: 254 QFGEIRTITVVQRQQCAFIQFATRQSAETAAEKSFNKLIVNGRRLNVKWGRSQAAR 309
>sp|Q3MHX3|RBM4_BOVIN RNA-binding protein 4 OS=Bos taurus GN=RBM4 PE=2 SV=1
Length = 362
Score = 42.0 bits (97), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 39/69 (56%), Gaps = 3/69 (4%)
Query: 197 LFVRNINSNVEDLELRSLFEQYGDIRTLYTACKHRGFFY--DVRAAEAALRALNRSDING 254
LF+ N+ + E+RSLFEQYG + K+ GF + D AAE A+R L+ ++G
Sbjct: 4 LFIGNLPREATEQEIRSLFEQYGKVLEC-DIIKNYGFVHIEDKTAAEDAIRNLHHYKLHG 62
Query: 255 KRIKLEPSR 263
I +E S+
Sbjct: 63 VNINVEASK 71
Score = 35.4 bits (80), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 38/71 (53%), Gaps = 3/71 (4%)
Query: 194 SRTLFVRNINSNVEDLELRSLFEQYGDIRTLYTACKHRGFFYDVRAAEA--ALRALNRSD 251
S L V NI+ + ELR+ FE+YG + K F + RA +A A+R L+ ++
Sbjct: 77 STKLHVGNISPTCTNKELRAKFEEYGPVIEC-DIVKDYAFVHMERAEDAVEAIRGLDNTE 135
Query: 252 INGKRIKLEPS 262
GKR+ ++ S
Sbjct: 136 FQGKRMHVQLS 146
>sp|Q3B7L8|RBM22_BOVIN Pre-mRNA-splicing factor RBM22 OS=Bos taurus GN=RBM22 PE=2 SV=1
Length = 420
Score = 42.0 bits (97), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 58/116 (50%), Gaps = 11/116 (9%)
Query: 161 NISDGIAGTGIAHYPISNGVGTVAGEHPYGEHPS----RTLFVRNINSNVEDLELRSLFE 216
NI D G + P+++ + A P + P TL+V + + + +LR+ F
Sbjct: 197 NIKDRYYGI---NDPVADKLLKRASTMPRLDPPEDKTITTLYVGGLGDTITETDLRNHFY 253
Query: 217 QYGDIRTLYTACKHRGFFYDV---RAAE-AALRALNRSDINGKRIKLEPSRPGGAR 268
Q+G+IRT+ + + F +AAE AA ++ N+ +NG+R+ ++ R AR
Sbjct: 254 QFGEIRTITVVQRQQCAFIQFATRQAAEVAAEKSFNKFIVNGRRLNVKWGRSQAAR 309
>sp|Q5RAY5|RBM22_PONAB Pre-mRNA-splicing factor RBM22 OS=Pongo abelii GN=RBM22 PE=2 SV=1
Length = 420
Score = 42.0 bits (97), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 58/116 (50%), Gaps = 11/116 (9%)
Query: 161 NISDGIAGTGIAHYPISNGVGTVAGEHPYGEHPS----RTLFVRNINSNVEDLELRSLFE 216
NI D G + P+++ + A P + P TL+V + + + +LR+ F
Sbjct: 197 NIKDRYYGI---NDPVADKLLKRASTMPRLDPPEDKTITTLYVGGLGDTITETDLRNHFY 253
Query: 217 QYGDIRTLYTACKHRGFFYDV---RAAE-AALRALNRSDINGKRIKLEPSRPGGAR 268
Q+G+IRT+ + + F +AAE AA ++ N+ +NG+R+ ++ R AR
Sbjct: 254 QFGEIRTITVVQRQQCAFIQFATRQAAEVAAEKSFNKLIVNGRRLNVKWGRSQAAR 309
>sp|Q06AT9|RBM4B_PIG RNA-binding protein 4B OS=Sus scrofa GN=RBM4B PE=2 SV=1
Length = 359
Score = 42.0 bits (97), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 39/69 (56%), Gaps = 3/69 (4%)
Query: 197 LFVRNINSNVEDLELRSLFEQYGDIRTLYTACKHRGFFY--DVRAAEAALRALNRSDING 254
LF+ N+ + E+RSLFEQYG + K+ GF + D AAE A+R L+ ++G
Sbjct: 4 LFIGNLPREATEQEIRSLFEQYGKVLEC-DIIKNYGFVHIEDKTAAEDAIRNLHHYKLHG 62
Query: 255 KRIKLEPSR 263
I +E S+
Sbjct: 63 VNINVEASK 71
Score = 35.4 bits (80), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 38/71 (53%), Gaps = 3/71 (4%)
Query: 194 SRTLFVRNINSNVEDLELRSLFEQYGDIRTLYTACKHRGFFYDVRAAEA--ALRALNRSD 251
S L V NI+ + ELR+ FE+YG + K F + RA +A A+R L+ ++
Sbjct: 77 STKLHVGNISPTCTNQELRAKFEEYGPVIEC-DIVKDYAFVHMERAEDAVEAIRGLDNTE 135
Query: 252 INGKRIKLEPS 262
GKR+ ++ S
Sbjct: 136 FQGKRMHVQLS 146
>sp|Q8BHS3|RBM22_MOUSE Pre-mRNA-splicing factor RBM22 OS=Mus musculus GN=Rbm22 PE=2 SV=1
Length = 420
Score = 42.0 bits (97), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 58/116 (50%), Gaps = 11/116 (9%)
Query: 161 NISDGIAGTGIAHYPISNGVGTVAGEHPYGEHPS----RTLFVRNINSNVEDLELRSLFE 216
NI D G + P+++ + A P + P TL+V + + + +LR+ F
Sbjct: 197 NIKDRYYGI---NDPVADKLLKRASTMPRLDPPEDKTITTLYVGGLGDTITETDLRNHFY 253
Query: 217 QYGDIRTLYTACKHRGFFYDV---RAAE-AALRALNRSDINGKRIKLEPSRPGGAR 268
Q+G+IRT+ + + F +AAE AA ++ N+ +NG+R+ ++ R AR
Sbjct: 254 QFGEIRTITVVQRQQCAFIQFATRQAAEVAAEKSFNKLIVNGRRLNVKWGRSQAAR 309
>sp|Q4R4J1|RBM22_MACFA Pre-mRNA-splicing factor RBM22 OS=Macaca fascicularis GN=RBM22 PE=2
SV=1
Length = 420
Score = 42.0 bits (97), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 58/116 (50%), Gaps = 11/116 (9%)
Query: 161 NISDGIAGTGIAHYPISNGVGTVAGEHPYGEHPS----RTLFVRNINSNVEDLELRSLFE 216
NI D G + P+++ + A P + P TL+V + + + +LR+ F
Sbjct: 197 NIKDRYYGI---NDPVADKLLKRASTMPRLDPPEDKTITTLYVGGLGDTITETDLRNHFY 253
Query: 217 QYGDIRTLYTACKHRGFFYDV---RAAE-AALRALNRSDINGKRIKLEPSRPGGAR 268
Q+G+IRT+ + + F +AAE AA ++ N+ +NG+R+ ++ R AR
Sbjct: 254 QFGEIRTITVVQRQQCAFIQFATRQAAEVAAEKSFNKLIVNGRRLNVKWGRSQAAR 309
>sp|Q9NW64|RBM22_HUMAN Pre-mRNA-splicing factor RBM22 OS=Homo sapiens GN=RBM22 PE=1 SV=1
Length = 420
Score = 42.0 bits (97), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 58/116 (50%), Gaps = 11/116 (9%)
Query: 161 NISDGIAGTGIAHYPISNGVGTVAGEHPYGEHPS----RTLFVRNINSNVEDLELRSLFE 216
NI D G + P+++ + A P + P TL+V + + + +LR+ F
Sbjct: 197 NIKDRYYGI---NDPVADKLLKRASTMPRLDPPEDKTITTLYVGGLGDTITETDLRNHFY 253
Query: 217 QYGDIRTLYTACKHRGFFYDV---RAAE-AALRALNRSDINGKRIKLEPSRPGGAR 268
Q+G+IRT+ + + F +AAE AA ++ N+ +NG+R+ ++ R AR
Sbjct: 254 QFGEIRTITVVQRQQCAFIQFATRQAAEVAAEKSFNKLIVNGRRLNVKWGRSQAAR 309
>sp|Q8C7Q4|RBM4_MOUSE RNA-binding protein 4 OS=Mus musculus GN=Rbm4 PE=1 SV=1
Length = 361
Score = 42.0 bits (97), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 39/69 (56%), Gaps = 3/69 (4%)
Query: 197 LFVRNINSNVEDLELRSLFEQYGDIRTLYTACKHRGFFY--DVRAAEAALRALNRSDING 254
LF+ N+ + E+RSLFEQYG + K+ GF + D AAE A+R L+ ++G
Sbjct: 4 LFIGNLPREATEQEIRSLFEQYGKVLEC-DIIKNYGFVHIEDKTAAEDAIRNLHHYKLHG 62
Query: 255 KRIKLEPSR 263
I +E S+
Sbjct: 63 VNINVEASK 71
Score = 35.0 bits (79), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 38/71 (53%), Gaps = 3/71 (4%)
Query: 194 SRTLFVRNINSNVEDLELRSLFEQYGDIRTLYTACKHRGFFYDVRAAEA--ALRALNRSD 251
S L V NI+ + ELR+ FE+YG + K F + RA +A A+R L+ ++
Sbjct: 77 STKLHVGNISPTCTNQELRAKFEEYGPVIEC-DIVKDYAFVHMERAEDAVEAIRGLDNTE 135
Query: 252 INGKRIKLEPS 262
GKR+ ++ S
Sbjct: 136 FQGKRMHVQLS 146
>sp|Q9BQ04|RBM4B_HUMAN RNA-binding protein 4B OS=Homo sapiens GN=RBM4B PE=1 SV=1
Length = 359
Score = 42.0 bits (97), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 39/69 (56%), Gaps = 3/69 (4%)
Query: 197 LFVRNINSNVEDLELRSLFEQYGDIRTLYTACKHRGFFY--DVRAAEAALRALNRSDING 254
LF+ N+ + E+RSLFEQYG + K+ GF + D AAE A+R L+ ++G
Sbjct: 4 LFIGNLPREATEQEIRSLFEQYGKVLEC-DIIKNYGFVHIEDKTAAEDAIRNLHHYKLHG 62
Query: 255 KRIKLEPSR 263
I +E S+
Sbjct: 63 VNINVEASK 71
Score = 35.0 bits (79), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 38/71 (53%), Gaps = 3/71 (4%)
Query: 194 SRTLFVRNINSNVEDLELRSLFEQYGDIRTLYTACKHRGFFYDVRAAEA--ALRALNRSD 251
S L V NI+ + ELR+ FE+YG + K F + RA +A A+R L+ ++
Sbjct: 77 STKLHVGNISPTCTNQELRAKFEEYGPVIEC-DIVKDYAFVHMERAEDAVEAIRGLDNTE 135
Query: 252 INGKRIKLEPS 262
GKR+ ++ S
Sbjct: 136 FQGKRMHVQLS 146
>sp|Q9BDY9|RBM4_RABIT RNA-binding protein 4 OS=Oryctolagus cuniculus GN=RBM4 PE=2 SV=1
Length = 359
Score = 42.0 bits (97), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 39/69 (56%), Gaps = 3/69 (4%)
Query: 197 LFVRNINSNVEDLELRSLFEQYGDIRTLYTACKHRGFFY--DVRAAEAALRALNRSDING 254
LF+ N+ + E+RSLFEQYG + K+ GF + D AAE A+R L+ ++G
Sbjct: 4 LFIGNLPREATEQEIRSLFEQYGKVLEC-DIIKNYGFVHIEDKTAAEDAIRNLHHYKLHG 62
Query: 255 KRIKLEPSR 263
I +E S+
Sbjct: 63 VNINVEASK 71
Score = 35.0 bits (79), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 38/71 (53%), Gaps = 3/71 (4%)
Query: 194 SRTLFVRNINSNVEDLELRSLFEQYGDIRTLYTACKHRGFFYDVRAAEA--ALRALNRSD 251
S L V NI+ + ELR+ FE+YG + K F + RA +A A+R L+ ++
Sbjct: 77 STKLHVGNISPTCTNQELRAKFEEYGPVIEC-DIVKDYAFVHMERAEDAVEAIRGLDNTE 135
Query: 252 INGKRIKLEPS 262
GKR+ ++ S
Sbjct: 136 FQGKRMHVQLS 146
>sp|Q4R979|RBM4_MACFA RNA-binding protein 4 OS=Macaca fascicularis GN=RBM4 PE=2 SV=1
Length = 364
Score = 42.0 bits (97), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 39/69 (56%), Gaps = 3/69 (4%)
Query: 197 LFVRNINSNVEDLELRSLFEQYGDIRTLYTACKHRGFFY--DVRAAEAALRALNRSDING 254
LF+ N+ + E+RSLFEQYG + K+ GF + D AAE A+R L+ ++G
Sbjct: 4 LFIGNLPREATEQEIRSLFEQYGKVLEC-DIIKNYGFVHIEDKTAAEDAIRNLHHYKLHG 62
Query: 255 KRIKLEPSR 263
I +E S+
Sbjct: 63 VNINVEASK 71
Score = 35.0 bits (79), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 38/71 (53%), Gaps = 3/71 (4%)
Query: 194 SRTLFVRNINSNVEDLELRSLFEQYGDIRTLYTACKHRGFFYDVRAAEA--ALRALNRSD 251
S L V NI+ + ELR+ FE+YG + K F + RA +A A+R L+ ++
Sbjct: 77 STKLHVGNISPTCTNKELRAKFEEYGPVIEC-DIVKDYAFVHMERAEDAVEAIRGLDNTE 135
Query: 252 INGKRIKLEPS 262
GKR+ ++ S
Sbjct: 136 FQGKRMHVQLS 146
>sp|Q9BWF3|RBM4_HUMAN RNA-binding protein 4 OS=Homo sapiens GN=RBM4 PE=1 SV=1
Length = 364
Score = 42.0 bits (97), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 39/69 (56%), Gaps = 3/69 (4%)
Query: 197 LFVRNINSNVEDLELRSLFEQYGDIRTLYTACKHRGFFY--DVRAAEAALRALNRSDING 254
LF+ N+ + E+RSLFEQYG + K+ GF + D AAE A+R L+ ++G
Sbjct: 4 LFIGNLPREATEQEIRSLFEQYGKVLEC-DIIKNYGFVHIEDKTAAEDAIRNLHHYKLHG 62
Query: 255 KRIKLEPSR 263
I +E S+
Sbjct: 63 VNINVEASK 71
Score = 35.0 bits (79), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 38/71 (53%), Gaps = 3/71 (4%)
Query: 194 SRTLFVRNINSNVEDLELRSLFEQYGDIRTLYTACKHRGFFYDVRAAEA--ALRALNRSD 251
S L V NI+ + ELR+ FE+YG + K F + RA +A A+R L+ ++
Sbjct: 77 STKLHVGNISPTCTNKELRAKFEEYGPVIEC-DIVKDYAFVHMERAEDAVEAIRGLDNTE 135
Query: 252 INGKRIKLEPS 262
GKR+ ++ S
Sbjct: 136 FQGKRMHVQLS 146
>sp|Q64LC9|RBM4B_RAT RNA-binding protein 4B OS=Rattus norvegicus GN=Rbm4b PE=2 SV=2
Length = 357
Score = 42.0 bits (97), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 39/69 (56%), Gaps = 3/69 (4%)
Query: 197 LFVRNINSNVEDLELRSLFEQYGDIRTLYTACKHRGFFY--DVRAAEAALRALNRSDING 254
LF+ N+ + E+RSLFEQYG + K+ GF + D AAE A+R L+ ++G
Sbjct: 4 LFIGNLPREATEQEIRSLFEQYGKVLEC-DIIKNYGFVHIEDKTAAEDAIRNLHHYKLHG 62
Query: 255 KRIKLEPSR 263
I +E S+
Sbjct: 63 VNINVEASK 71
Score = 35.0 bits (79), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 38/71 (53%), Gaps = 3/71 (4%)
Query: 194 SRTLFVRNINSNVEDLELRSLFEQYGDIRTLYTACKHRGFFYDVRAAEA--ALRALNRSD 251
S L V NI+ + ELR+ FE+YG + K F + RA +A A+R L+ ++
Sbjct: 77 STKLHVGNISPTCTNQELRAKFEEYGPVIEC-DIVKDYAFVHMERAEDAVEAIRGLDNTE 135
Query: 252 INGKRIKLEPS 262
GKR+ ++ S
Sbjct: 136 FQGKRMHVQLS 146
>sp|Q8VE92|RBM4B_MOUSE RNA-binding protein 4B OS=Mus musculus GN=Rbm4b PE=1 SV=1
Length = 357
Score = 42.0 bits (97), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 39/69 (56%), Gaps = 3/69 (4%)
Query: 197 LFVRNINSNVEDLELRSLFEQYGDIRTLYTACKHRGFFY--DVRAAEAALRALNRSDING 254
LF+ N+ + E+RSLFEQYG + K+ GF + D AAE A+R L+ ++G
Sbjct: 4 LFIGNLPREATEQEIRSLFEQYGKVLEC-DIIKNYGFVHIEDKTAAEDAIRNLHHYKLHG 62
Query: 255 KRIKLEPSR 263
I +E S+
Sbjct: 63 VNINVEASK 71
Score = 35.0 bits (79), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 38/71 (53%), Gaps = 3/71 (4%)
Query: 194 SRTLFVRNINSNVEDLELRSLFEQYGDIRTLYTACKHRGFFYDVRAAEA--ALRALNRSD 251
S L V NI+ + ELR+ FE+YG + K F + RA +A A+R L+ ++
Sbjct: 77 STKLHVGNISPTCTNQELRAKFEEYGPVIEC-DIVKDYAFVHMERAEDAVEAIRGLDNTE 135
Query: 252 INGKRIKLEPS 262
GKR+ ++ S
Sbjct: 136 FQGKRMHVQLS 146
>sp|Q1DXH0|PABP_COCIM Polyadenylate-binding protein, cytoplasmic and nuclear
OS=Coccidioides immitis (strain RS) GN=PAB1 PE=3 SV=1
Length = 768
Score = 41.6 bits (96), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 38/70 (54%), Gaps = 9/70 (12%)
Query: 197 LFVRNINSNVEDLELRSLFEQYGDIRTLYTA-----CKHRGF----FYDVRAAEAALRAL 247
++V+NI+ + + E R LFE++G+I + A K RGF F A AA+ AL
Sbjct: 238 VYVKNIDQDTTEEEFRDLFEKFGEITSATLARDAESGKSRGFGFVNFTSHDNAAAAVEAL 297
Query: 248 NRSDINGKRI 257
N D G+++
Sbjct: 298 NDKDFKGQKL 307
>sp|Q4V7D7|RBM22_RAT Pre-mRNA-splicing factor RBM22 OS=Rattus norvegicus GN=Rbm22 PE=2
SV=1
Length = 420
Score = 41.6 bits (96), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 58/116 (50%), Gaps = 11/116 (9%)
Query: 161 NISDGIAGTGIAHYPISNGVGTVAGEHPYGEHPS----RTLFVRNINSNVEDLELRSLFE 216
NI D G + P+++ + A P + P TL+V + + + +LR+ F
Sbjct: 197 NIKDRYYGI---NDPVADKLLKRASTMPRLDPPEDKTITTLYVGGLGDTITETDLRNHFY 253
Query: 217 QYGDIRTLYTACKHRGFFYDV---RAAE-AALRALNRSDINGKRIKLEPSRPGGAR 268
Q+G+IRT+ + + F +AAE AA ++ N+ +NG+R+ ++ R AR
Sbjct: 254 QFGEIRTVTVVQRQQCAFIQFATRQAAEVAAEKSFNKLIVNGRRLNVKWGRSQAAR 309
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.312 0.132 0.387
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 323,724,100
Number of Sequences: 539616
Number of extensions: 15514941
Number of successful extensions: 32165
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 441
Number of HSP's that attempted gapping in prelim test: 31028
Number of HSP's gapped (non-prelim): 1154
length of query: 783
length of database: 191,569,459
effective HSP length: 126
effective length of query: 657
effective length of database: 123,577,843
effective search space: 81190642851
effective search space used: 81190642851
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 65 (29.6 bits)