Your job contains 1 sequence.
>003965
MALLDVTKSCIDSIKQISEHIKDAILYLDSGCTESFQLIGAFPVLLELGVRAVCCLENMS
PLDSVVDWNSNIDPMRKMVVMTSRLLSDAHRYIVRCLSASYGIRHCAIFTSISEIAHSAY
TDSPLGPDAFHEYETLLLQDYEELVRKRQTKSGQSEDTGFQKRLTFEDDGWSHLTSSEED
TSTFEASSSGKDFYKEDVGQELVVSVHHFPMILCPLSPRVFVLPSEGSVAEACLSVEHED
SLSPVLPPIGTGLFSDGDDVPPGAILTAHLIYHLASKMDLKMEIFSLGDLSKNVGKLLTD
MSSLYDVGRRKRTAGLLLVDRTFDLLTPCCHGDSLVDRMFSSLPRRKRTAFYAHIKGSQS
RAKLGSSSVQRSPVEVQIPLAKILSEEDSKLDDSRLQGNIEAFLRGWDAYNSSSEVVDLS
LSSEIELLSGSFVSTENFRGTPYMEALLDRRMKDGTVLIKKWLQEALRQENLTVNVRSRP
GSATKSELQAMIKALAKNQSSLVRNRGIIQFATAALAALDESHSARWDAFISAEKMLHVS
AEDTSQSLAAQIGDLINKSCLVGSHDQKTRKMELSSRLLSFKDALLLTVTGYILAGENFP
TSGSGGPFSWQEEHFLKEAIVDAIFENPSEAKFKFLHEQQYNDMQLKLELQDRVDNLFKF
LHKVSGLKRKNIPLRDSAFGSDSHFHGDSYASKGLLYKLLMKVLAKSDVPGLEYHSSTAK
PSLADQNVILIFVIGGINGLEVHEALEALSESGRPDLELILGGTTLLTPADMFDLLLGDS
SYI
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 003965
(783 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
UNIPROTKB|E2RJT8 - symbol:SCFD2 "Uncharacterized protein"... 166 3.3e-20 3
UNIPROTKB|Q8WU76 - symbol:SCFD2 "Sec1 family domain-conta... 154 3.4e-19 3
UNIPROTKB|A0JN38 - symbol:SCFD2 "Uncharacterized protein"... 156 5.5e-18 3
MGI|MGI:2443446 - symbol:Scfd2 "Sec1 family domain contai... 159 1.1e-17 3
RGD|1562708 - symbol:Scfd2 "sec1 family domain containing... 158 2.2e-17 3
ZFIN|ZDB-GENE-050320-143 - symbol:scfd2 "sec1 family doma... 131 7.0e-16 3
UNIPROTKB|F1SE65 - symbol:SCFD2 "Uncharacterized protein"... 132 2.9e-15 3
UNIPROTKB|F1NVY6 - symbol:SCFD2 "Uncharacterized protein"... 122 2.0e-08 2
DICTYBASE|DDB_G0277343 - symbol:scfd2 "Sec1-like family p... 74 9.3e-06 7
>UNIPROTKB|E2RJT8 [details] [associations]
symbol:SCFD2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006904 "vesicle docking involved in
exocytosis" evidence=IEA] InterPro:IPR001619 Pfam:PF00995
PANTHER:PTHR11679 GO:GO:0006904 SUPFAM:SSF56815 CTD:152579
OMA:VKRAVVY GeneTree:ENSGT00390000011192 EMBL:AAEX03009064
RefSeq:XP_849695.1 Ensembl:ENSCAFT00000003218 GeneID:482149
KEGG:cfa:482149 Uniprot:E2RJT8
Length = 683
Score = 166 (63.5 bits), Expect = 3.3e-20, Sum P(3) = 3.3e-20
Identities = 77/350 (22%), Positives = 156/350 (44%)
Query: 445 EALLDRRMKDGTVLIKKWLQEALRQENLTVNVRSRPGSATKSELQAMIKALAKNQSSLVR 504
EALL + K+ + +++ L EA +ENL + + G T +L + I+ N ++V
Sbjct: 344 EALLSTKHKEAVMEVRRHLVEAASRENLPIKMSM--GRVTPGQLMSYIQLFKNNLKAIVN 401
Query: 505 NRGIIQFATAALAALDESHSARWDAFISAEKMLHVSAEDTSQSLAAQIGDLINKSCLVGS 564
+ G++Q A + L +A+WD F++ E++L S +++ S+ + L+ ++
Sbjct: 402 HCGLLQLGLATVQTLKHPQTAKWDNFLAFERLLLQSIGESTMSVV--LNQLLP---MIKP 456
Query: 565 HDQKTRKMELSSRLLSFKDALLLTVTGYILAGENFPTSGSGGPFSWQEEHFLKEAIVDAI 624
+Q+T K + S ++ L+L + Y ++GE F G + + +KEA+
Sbjct: 457 LNQRT-KDDYSP-----EELLILLIYVYSVSGE-FTVDKDLG----EADEKVKEALARVF 505
Query: 625 FENPSEAKFKFLHEQQYNDMQLKLELQD-RVDNLFKFLHKVSGLKRKNIPLRDSAFGSDS 683
E + + ++L VD LF L ++G + + S + +
Sbjct: 506 CEESELSPLLQKITGCDSSIKLTFHKSKIAVDELFASLRDIAGARNLMKQFK-SVYVPGN 564
Query: 684 HFHGDSYAS--KGLLYKLLMKVLAKSDVPGLEYHSS---------------TAKPSLADQ 726
H H SY K ++ ++ + D +E+ SS ++P +D
Sbjct: 565 HTHQASYKPLLKQVVEEIFNP--ERPDPVDIEHMSSGLTDLLKTGFSMFMKVSRPHPSDH 622
Query: 727 NVILIFVIGGINGLEVHEALEALSESGRPDLELIXXXXXXXXPADMFDLL 776
++++FV+GG+ E + L+ L S +P ++I P ++ +LL
Sbjct: 623 PLLILFVVGGVTVSEA-KMLKDLVPSLKPGTQVIVLSTRLLKPLNIPELL 671
Score = 118 (46.6 bits), Expect = 3.3e-20, Sum P(3) = 3.3e-20
Identities = 44/150 (29%), Positives = 74/150 (49%)
Query: 206 VHHFPMILCPLSPRVFVLPSEGSVAEACLSVEHE-DSLSPVLPPIGTGLFSDGDDVPPGA 264
V H P+ L P++P + + P+ S+ H + P +G+ D +PP
Sbjct: 152 VLHVPLWLAPVAPHLALTPAFASLFPLLPRDVHLLNRARPDKRRLGSLSEVDAAALPPEL 211
Query: 265 ILTAH-LIYHLAS---KMDLKMEIFSLGDLSKNVGKLLTDMSSLYDV-GRRKRTAG---L 316
+L L+ L+S + ++ E F++G LS+ + D++S RRK AG +
Sbjct: 212 LLQIRCLVSGLSSLCEHLGVREECFAVGSLSRIIA---ADLASYAPAKNRRKTAAGRASV 268
Query: 317 LLVDRTFDLLTPCCH-GDSLVDRMFSSLPR 345
+ VDRT DL H GD+LV+++ S LP+
Sbjct: 269 VFVDRTLDLTGAAGHHGDNLVEKIISVLPQ 298
Score = 87 (35.7 bits), Expect = 3.3e-20, Sum P(3) = 3.3e-20
Identities = 36/131 (27%), Positives = 57/131 (43%)
Query: 15 KQISEHIKDAILYLDSGCTESFQL-IGAFPVLLELGVRAVCCLENMSPLDSVVDWNSNID 73
+Q+ +K A++YLD+ C ES GA +L +G A C L P + V +
Sbjct: 15 EQVLAKVKRALVYLDAACAESLHWGCGASRLLEAVGGPA-CHLREFEP--AAVGGGAE-Q 70
Query: 74 PMRKMVVMTSRLLSDAHRYIVRCLSASYGIRHCAIFTSISEIAHSAYTDSPLGPDAFHEY 133
P K V + S LL +R + ++C + T++S AH P A E
Sbjct: 71 P--KAVFVLSCLLKGRTVETLREIIGRSRFQYCVVVTAVSHAAHLTANHVPAAAAAELEG 128
Query: 134 ETLLLQDYEEL 144
+ + Q E+L
Sbjct: 129 QPVFEQLEEKL 139
>UNIPROTKB|Q8WU76 [details] [associations]
symbol:SCFD2 "Sec1 family domain-containing protein 2"
species:9606 "Homo sapiens" [GO:0006904 "vesicle docking involved
in exocytosis" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
[GO:0003674 "molecular_function" evidence=ND] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR001619 Pfam:PF00995
PANTHER:PTHR11679 GO:GO:0015031 GO:GO:0006904 SUPFAM:SSF56815
EMBL:AY299407 EMBL:AK096833 EMBL:BC012458 EMBL:BC021137
EMBL:BC032453 IPI:IPI00141564 IPI:IPI00419891 RefSeq:NP_689753.2
UniGene:Hs.302287 ProteinModelPortal:Q8WU76 IntAct:Q8WU76
PhosphoSite:Q8WU76 DMDM:51338675 PaxDb:Q8WU76 PRIDE:Q8WU76
DNASU:152579 Ensembl:ENST00000388940 Ensembl:ENST00000401642
GeneID:152579 KEGG:hsa:152579 UCSC:uc003gzu.3 UCSC:uc010igm.3
CTD:152579 GeneCards:GC04M053739 HGNC:HGNC:30676 HPA:HPA036526
neXtProt:NX_Q8WU76 PharmGKB:PA134953686 eggNOG:NOG75473
HOGENOM:HOG000234008 HOVERGEN:HBG055096 InParanoid:Q8WU76
OMA:VKRAVVY OrthoDB:EOG4HHP3N GenomeRNAi:152579 NextBio:86992
ArrayExpress:Q8WU76 Bgee:Q8WU76 CleanEx:HS_SCFD2
Genevestigator:Q8WU76 GermOnline:ENSG00000184178 Uniprot:Q8WU76
Length = 684
Score = 154 (59.3 bits), Expect = 3.4e-19, Sum P(3) = 3.4e-19
Identities = 73/348 (20%), Positives = 148/348 (42%)
Query: 445 EALLDRRMKDGTVLIKKWLQEALRQENLTVNVRSRPGSATKSELQAMIKALAKNQSSLVR 504
EALL+ + K+ + +++ L EA +ENL + + G T +L + I+ N +L+
Sbjct: 345 EALLNTKHKEAVMEVRRHLVEAASRENLPIKMSM--GRVTPGQLMSYIQLFKNNLKALMN 402
Query: 505 NRGIIQFATAALAALDESHSARWDAFISAEKMLHVSAEDTSQSLAAQIGDLINKSCLVGS 564
+ G++Q A L +A+WD F++ E++L S +++ S+ + L+ ++
Sbjct: 403 HCGLLQLGLATAQTLKHPQTAKWDNFLAFERLLLQSIGESAMSVV--LNQLLP---MIKP 457
Query: 565 HDQKTRKMELSSRLLSFKDALLLTVTGYILAGENFPTSGSGGPFSWQEEHFLKEAIVDAI 624
Q+T + + S L + +VTG + ++ + E +K+A+
Sbjct: 458 VTQRTNE-DYSPEELLILLIYIYSVTGELTVDKDL----------CEAEEKVKKALAQVF 506
Query: 625 FENPSEAKFKFLHEQQYNDMQLKLELQD-RVDNLFKFLHKVSGLKRKNIPLRDSAFGSDS 683
E + + + L VD LF L ++G R + S + +
Sbjct: 507 CEESGLSPLLQKITDWDSSINLTFHKSKIAVDELFTSLRDIAGA-RSLLKQFKSVYVPGN 565
Query: 684 HFHGDSYAS--KGLLYKLLMKVLAKS-DVP------------GLEYHSSTAKPSLADQNV 728
H H SY K ++ ++ S D+ G ++P +D +
Sbjct: 566 HTHQASYKPLLKQVVEEIFHPERPDSVDIEHMSSGLTDLLKTGFSMFMKVSRPHPSDYPL 625
Query: 729 ILIFVIGGINGLEVHEALEALSESGRPDLELIXXXXXXXXPADMFDLL 776
+++FV+GG+ EV + ++ L S +P ++I P ++ +LL
Sbjct: 626 LILFVVGGVTVSEV-KMVKDLVASLKPGTQVIVLSTRLLKPLNIPELL 672
Score = 122 (48.0 bits), Expect = 3.4e-19, Sum P(3) = 3.4e-19
Identities = 42/150 (28%), Positives = 75/150 (50%)
Query: 206 VHHFPMILCPLSPRVFVLPSEGSVAEACLSVEHE-DSLSPVLPPIGTGLFSDGDDVPPGA 264
V H P++L P++P + P+ S+ H +S P +G+ D + P
Sbjct: 153 VFHVPLLLAPVAPHFALTPAFASLFPLLPQDVHLLNSARPDKRKLGSLGDVDSTTLTPEL 212
Query: 265 ILTAH-LIYHLAS---KMDLKMEIFSLGDLSKNVGKLLTDMSSLYDVGRRKRTAG----L 316
+L L+ L+S + ++ E F++G LS+ + D+++ RK+TA +
Sbjct: 213 LLQIRCLVSGLSSLCEHLGVREECFAVGSLSQVIA---ADLANYAPAKNRKKTAAGRASV 269
Query: 317 LLVDRTFDLLTPCCH-GDSLVDRMFSSLPR 345
+ VDRT DL H GD+LV+++ S+LP+
Sbjct: 270 VFVDRTLDLTGAVGHHGDNLVEKIISALPQ 299
Score = 86 (35.3 bits), Expect = 3.4e-19, Sum P(3) = 3.4e-19
Identities = 33/129 (25%), Positives = 52/129 (40%)
Query: 15 KQISEHIKDAILYLDSGCTESFQLIGAFPVLLELGVRAVCCLENMSPLDSVVDWNSNIDP 74
+Q+ +K A++YLD+ C ES LLE C L P D++ P
Sbjct: 15 EQVLAKVKRAVVYLDAACAESLHWGCGSTRLLEAVGGPDCHLREFEP-DAI--GGGAKQP 71
Query: 75 MRKMVVMTSRLLSDAHRYIVRCLSASYGIRHCAIFTSISEIAHSAYTDSPLGPDAFHEYE 134
K V + S LL I+R + ++C + T++S H P A E +
Sbjct: 72 --KAVFVLSCLLKGRTVEILRDIICRSHFQYCVVVTTVSHAVHLTANHVPAAAAAEMEGQ 129
Query: 135 TLLLQDYEE 143
+ + EE
Sbjct: 130 QPVFEQLEE 138
>UNIPROTKB|A0JN38 [details] [associations]
symbol:SCFD2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0006904 "vesicle docking involved in exocytosis"
evidence=IEA] InterPro:IPR001619 Pfam:PF00995 PANTHER:PTHR11679
GO:GO:0006904 SUPFAM:SSF56815 CTD:152579 eggNOG:NOG75473
HOGENOM:HOG000234008 HOVERGEN:HBG055096 OMA:VKRAVVY
OrthoDB:EOG4HHP3N GeneTree:ENSGT00390000011192 EMBL:DAAA02017669
EMBL:DAAA02017670 EMBL:DAAA02017671 EMBL:DAAA02017672
EMBL:DAAA02017673 EMBL:DAAA02017674 EMBL:DAAA02017675
EMBL:DAAA02017676 EMBL:DAAA02017677 EMBL:DAAA02017678
EMBL:DAAA02017679 EMBL:DAAA02017680 EMBL:DAAA02017681 EMBL:BC126501
IPI:IPI00708188 RefSeq:NP_001071473.1 UniGene:Bt.27398
Ensembl:ENSBTAT00000027519 GeneID:535130 KEGG:bta:535130
InParanoid:A0JN38 NextBio:20876633 Uniprot:A0JN38
Length = 684
Score = 156 (60.0 bits), Expect = 5.5e-18, Sum P(3) = 5.5e-18
Identities = 77/350 (22%), Positives = 153/350 (43%)
Query: 445 EALLDRRMKDGTVLIKKWLQEALRQENLTVNVRSRPGSATKSELQAMIKALAKNQSSLVR 504
EALL+ + K+ + +++ L EA +ENL + + G T +L + I+ N SL
Sbjct: 345 EALLNTKHKEAVMEVRRHLVEAASRENLPIKMSV--GRVTPGQLMSYIQLFKNNLKSLGN 402
Query: 505 NRGIIQFATAALAALDESHSARWDAFISAEKMLHVSAEDTSQSLAAQIGDLINKSCLVGS 564
+ G++Q A + L +A+WD F++ E++L + +++ S+ + L+ ++
Sbjct: 403 HCGLLQLGLATVQTLKHPQTAKWDNFLAFERLLLQNIGESTMSVV--LNQLLP---MIKP 457
Query: 565 HDQKTRKMELSSRLLSFKDALLLTVTGYILAGENFPTSGSGGPFSWQEEHFLKEAIVDAI 624
+Q+T LL LLL + Y + GE F G + E +K+A+
Sbjct: 458 LNQRTSDDYSPEELL----VLLLYI--YSVGGE-FSVDKDLG----EGEEKVKKALAQVF 506
Query: 625 FENPSEAKFKFLHEQQYNDMQLKL-ELQDRVDNLFKFLHKVSGLKRKNIPLRDSAFGSDS 683
E + + + L + + VD LF L ++G + + S + +
Sbjct: 507 CEESELSPLLRKITGCDSSINLTFHKSKSAVDELFTLLRDIAGARNLMKQFK-SVYVPGN 565
Query: 684 HFHGDSYAS--KGLLYKLLMKVLAKSDVPGLEYHSS---------------TAKPSLADQ 726
H H SY K ++ ++ + D +E+ SS ++P +D
Sbjct: 566 HTHQASYKPLLKQVVEEIFNP--ERPDPVDIEHMSSGLTDLLKTGFSMFMKVSRPHPSDH 623
Query: 727 NVILIFVIGGINGLEVHEALEALSESGRPDLELIXXXXXXXXPADMFDLL 776
++++FV+GG+ E + ++ L S +P ++I P ++ +LL
Sbjct: 624 PLLILFVVGGVTVSEA-KMIKDLVLSLKPGTQVIVLSTRLLKPLNIPELL 672
Score = 115 (45.5 bits), Expect = 5.5e-18, Sum P(3) = 5.5e-18
Identities = 40/150 (26%), Positives = 75/150 (50%)
Query: 206 VHHFPMILCPLSPRVFVLPSEGSVAEACLSVEHE-DSLSPVLPPIGTGLFSDGDDVPPGA 264
V H P++L P++P + + P+ S+ H +S P +G+ D + P
Sbjct: 153 VLHIPLLLAPVAPHLALTPAFASLFPLLPQDVHILNSARPDRRRLGSLAEVDATALTPEL 212
Query: 265 ILTAH-LIYHLAS---KMDLKMEIFSLGDLSKNVGKLLTDMSSLYDVGRRKRTA----GL 316
+L L+ L+S + ++ E F++G LS+ + D+++ R++TA +
Sbjct: 213 LLQIRCLVSGLSSLCEHLGVREECFAVGALSRIIA---ADLANFAPAKNRRKTATGRASV 269
Query: 317 LLVDRTFDLLTPCCH-GDSLVDRMFSSLPR 345
+ VDRT DL H GD+LV+++ + LP+
Sbjct: 270 VFVDRTLDLTGAVGHHGDNLVEKILAVLPQ 299
Score = 79 (32.9 bits), Expect = 5.5e-18, Sum P(3) = 5.5e-18
Identities = 30/130 (23%), Positives = 56/130 (43%)
Query: 15 KQISEHIKDAILYLDSGCTESFQL-IGAFPVLLELGVRAVCCLENMSPLDSVVDWNSNID 73
+Q+ K A++YLD+ C ES G+ +L +G A C L P + V ++
Sbjct: 15 EQVLAKAKRAVVYLDAACAESLHWGCGSSRLLEAVGSPA-CYLREFEP--AAV--GGGVE 69
Query: 74 PMRKMVVMTSRLLSDAHRYIVRCLSASYGIRHCAIFTSISEIAHSAYTDSPLGPDAFHEY 133
+ + V++S LL +R + ++C + T+++ H P A E
Sbjct: 70 QPKAVFVLSS-LLKGRIVETLRDIICRSHFQYCVVVTAVNHAVHLTANHVPAAAAAELEG 128
Query: 134 ETLLLQDYEE 143
+ + + EE
Sbjct: 129 QQPVFEQLEE 138
>MGI|MGI:2443446 [details] [associations]
symbol:Scfd2 "Sec1 family domain containing 2" species:10090
"Mus musculus" [GO:0003674 "molecular_function" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] [GO:0006810
"transport" evidence=IEA] [GO:0006904 "vesicle docking involved in
exocytosis" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0015031 "protein transport" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA]
InterPro:IPR001619 Pfam:PF00995 MGI:MGI:2443446 PANTHER:PTHR11679
GO:GO:0015031 GO:GO:0006904 SUPFAM:SSF56815 CTD:152579
eggNOG:NOG75473 HOVERGEN:HBG055096 OMA:VKRAVVY OrthoDB:EOG4HHP3N
EMBL:AK036637 EMBL:AK044408 EMBL:AK047026 EMBL:AK047738
EMBL:AK050673 EMBL:AK054548 EMBL:AK088353 EMBL:AK089011
EMBL:AK140246 EMBL:BC042528 IPI:IPI00225317 IPI:IPI00420192
IPI:IPI00420193 IPI:IPI00420194 RefSeq:NP_001108132.1
RefSeq:NP_848787.2 UniGene:Mm.134147 ProteinModelPortal:Q8BTY8
PaxDb:Q8BTY8 PRIDE:Q8BTY8 Ensembl:ENSMUST00000072857
Ensembl:ENSMUST00000075848 Ensembl:ENSMUST00000113542
Ensembl:ENSMUST00000151474 GeneID:212986 KEGG:mmu:212986
UCSC:uc008xtk.2 UCSC:uc012dxh.1 GeneTree:ENSGT00390000011192
InParanoid:Q8BTY8 ChiTaRS:SCFD2 NextBio:373782 Bgee:Q8BTY8
CleanEx:MM_SCFD2 Genevestigator:Q8BTY8
GermOnline:ENSMUSG00000062110 Uniprot:Q8BTY8
Length = 684
Score = 159 (61.0 bits), Expect = 1.1e-17, Sum P(3) = 1.1e-17
Identities = 80/352 (22%), Positives = 161/352 (45%)
Query: 445 EALLDRRMKDGTVLIKKWLQEALRQENLTVNVRSRPGSATKSELQAMIKALAKNQSSLVR 504
EALL+ + K+ + +++ L EA +ENL + + G T +L + I+ L KN +R
Sbjct: 345 EALLNSKHKEAVMEVRRHLVEAASRENLPIKMSM--GRVTPGQLMSYIQ-LFKNNLRALR 401
Query: 505 NR-GIIQFATAALAALDESHSARWDAFISAEKMLHVSAEDTSQSLAAQIGDLINKSCLVG 563
N G++Q A + L +A+WD F++ E++L S D++ +A + L+ ++
Sbjct: 402 NHCGLLQLGMATVQTLKHPQTAKWDNFLAFERLLLQSLGDST--MAGVLNQLLP---MIK 456
Query: 564 SHDQKTRKMELSSRLLSFKDALLLTVTGYILAGENFPTSGSGGPFSWQEEHFLKEAIVDA 623
S Q+T S L+ ++ L+L + Y + G+ G E +K+A+
Sbjct: 457 SSSQRT------SDDLNPEELLILLIYIYSVPGDVTLDRDLG-----DVEEKVKKALAHV 505
Query: 624 IFENPSEAKF--KFLHEQQYNDMQLKLELQDRVDNLFKFLHKVSGLKRKNIPLRDSAFGS 681
+ E + K D+ L + Q V+++F L +++G + + S +
Sbjct: 506 LSEESELSPLLQKITGCDSAVDLTLP-KSQIAVNDVFMALREIAGARNLMRQFK-SVYVP 563
Query: 682 DSHFHGDSYAS--KGLLYKLLMKVLAKSDVPGLEYHSS---------------TAKPSLA 724
++ H SY K ++ ++ KSD +E+ SS ++P +
Sbjct: 564 GNNTHQASYKPLLKQVVEEIFNP--EKSDPIDIEHMSSGLTDLLKTGFSMFMKVSRPHPS 621
Query: 725 DQNVILIFVIGGINGLEVHEALEALSESGRPDLELIXXXXXXXXPADMFDLL 776
D ++++FV+GG+ E + ++ L S +P +++ P ++ +LL
Sbjct: 622 DHPLLILFVVGGVTVAEA-KMVKDLVASLKPGTQVMVLSTRLLKPLNIPELL 672
Score = 105 (42.0 bits), Expect = 1.1e-17, Sum P(3) = 1.1e-17
Identities = 43/161 (26%), Positives = 76/161 (47%)
Query: 196 EDVGQE-LVVSVHHFPMILCPLSPRVFVLPSEGSVAEACLSVEHE-DSLSPVLPPIGTGL 253
E +G E V H P+ L P++ + P+ ++ H +S P + +
Sbjct: 142 EWMGNENYTAEVLHVPLFLAPVASHLAFTPAFATLFPLLPQDVHALNSARPDKRRLSSLG 201
Query: 254 FSDGDDVPPGAILTAH-LIYHLAS---KMDLKMEIFSLGDLSKNVGKLLTDMSSLYDVGR 309
D + P +L L+ L+S + ++ E F++G LS+ + TD+++
Sbjct: 202 EVDATALTPELLLYIRCLVSGLSSLCEHLGVREECFAVGPLSRVIA---TDLANYAPAKN 258
Query: 310 RKRTA----GLLLVDRTFDLLTPCCH-GDSLVDRMFSSLPR 345
RK+TA ++ VDRT DL H GD+LV+++ S LP+
Sbjct: 259 RKKTATGRASVVFVDRTLDLTGAVGHHGDNLVEKIMSVLPQ 299
Score = 83 (34.3 bits), Expect = 1.1e-17, Sum P(3) = 1.1e-17
Identities = 30/129 (23%), Positives = 52/129 (40%)
Query: 15 KQISEHIKDAILYLDSGCTESFQLIGAFPVLLELGVRAVCCLENMSPLDSVVDWNSNIDP 74
+Q+ +K +++YLD+ C ES LLE C L P + + P
Sbjct: 15 EQVLAKVKWSVVYLDAACAESLHWSCGSSRLLEAVKGPACHLREFEP--QAIGGGAK-QP 71
Query: 75 MRKMVVMTSRLLSDAHRYIVRCLSASYGIRHCAIFTSISEIAHSAYTDSPLGPDAFHEYE 134
R + V++S L + + S+ +HC + T++S H P A E +
Sbjct: 72 -RAVFVLSSPLKGRIVDTLQSIICRSH-FQHCVVVTAVSHAVHLTANHVPAAAAAELEGQ 129
Query: 135 TLLLQDYEE 143
+ + EE
Sbjct: 130 QPVFEQLEE 138
>RGD|1562708 [details] [associations]
symbol:Scfd2 "sec1 family domain containing 2" species:10116
"Rattus norvegicus" [GO:0003674 "molecular_function" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] [GO:0006904 "vesicle
docking involved in exocytosis" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR001619 Pfam:PF00995
RGD:1562708 PANTHER:PTHR11679 GO:GO:0006904 SUPFAM:SSF56815
CTD:152579 eggNOG:NOG75473 HOGENOM:HOG000234008 HOVERGEN:HBG055096
OMA:VKRAVVY OrthoDB:EOG4HHP3N GeneTree:ENSGT00390000011192
EMBL:AC099101 EMBL:AC128952 EMBL:BC085889 IPI:IPI00393366
RefSeq:NP_001017499.1 UniGene:Rn.3326 Ensembl:ENSRNOT00000038506
GeneID:498353 KEGG:rno:498353 UCSC:RGD:1562708 InParanoid:Q5U2R9
NextBio:699522 Genevestigator:Q5U2R9 Uniprot:Q5U2R9
Length = 684
Score = 158 (60.7 bits), Expect = 2.2e-17, Sum P(3) = 2.2e-17
Identities = 77/351 (21%), Positives = 156/351 (44%)
Query: 445 EALLDRRMKDGTVLIKKWLQEALRQENLTVNVRSRPGSATKSELQAMIKALAKNQSSLVR 504
EALL+ + K+ + +++ L EA +ENL + + G T +L + I+ N +L
Sbjct: 345 EALLNTKHKEAVMEVRRHLVEAASRENLPIKMSM--GRVTPGQLMSYIQLFKNNLRALTN 402
Query: 505 NRGIIQFATAALAALDESHSARWDAFISAEKMLHVSAEDTSQSLAAQIGDLINKSCLVGS 564
+ G++Q A + L +A+WD F++ E++L S D++ +A + L+ L+ S
Sbjct: 403 HCGLLQLGMATVQTLKHPQTAKWDNFLAFERLLLQSLGDST--MAGVLNQLLP---LIKS 457
Query: 565 HDQKTRKMELSSRLLSFKDALLLTVTGYILAGENFPTSGSGGPFSWQEEHFLKEAIVDAI 624
Q+TR + S ++ L+L + Y + GE + G E ++ A+
Sbjct: 458 SSQRTRD-DYSP-----EELLILLIYIYSVTGECTRDTDLG-----DVEEKVRRALASVF 506
Query: 625 FENPSEAKF--KFLHEQQYNDMQLKLELQDRVDNLFKFLHKVSGLKRKNIPLRDSAFGSD 682
E + K D+ L + Q V+++F L +++G R + S +
Sbjct: 507 SEESELSPLLQKITGCDSAIDLTLP-KSQTAVNDVFTALREIAGA-RNLLRQFKSVYVPG 564
Query: 683 SHFHGDSYAS--KGLLYKLLMKVLAKSDVPGLEYHSS---------------TAKPSLAD 725
+ H +Y K ++ ++ K D +E+ SS ++P +D
Sbjct: 565 NSTHQAAYKPLLKQVVEEIFNP--EKPDPIDIEHMSSGLTDLLKTGFSMFMKVSRPHPSD 622
Query: 726 QNVILIFVIGGINGLEVHEALEALSESGRPDLELIXXXXXXXXPADMFDLL 776
++++FV+GG+ E + ++ L S +P +++ P ++ +LL
Sbjct: 623 HPLLILFVVGGVTVAEA-KMVKDLVASLKPGTQVMVLSTRLLKPLNIPELL 672
Score = 107 (42.7 bits), Expect = 2.2e-17, Sum P(3) = 2.2e-17
Identities = 39/150 (26%), Positives = 74/150 (49%)
Query: 206 VHHFPMILCPLSPRVFVLPSEGSVAEACLSVEHE-DSLSPVLPPIGTGLFSDGDDVPPGA 264
V H P++L P +P + P+ ++ H ++ P + + D + P
Sbjct: 153 VLHVPLLLAPAAPHLAFTPAFATLFPLLPQDVHVLNNARPDKRRLNSLGEVDATALTPEL 212
Query: 265 ILTAH-LIYHLAS---KMDLKMEIFSLGDLSKNVGKLLTDMSSLYDVGRRKRTA----GL 316
+L L+ L+S + ++ E F++G LS+ + TD+++ R++TA +
Sbjct: 213 LLYIRCLVSGLSSLCEHLGVREECFAVGSLSRVIA---TDLANYAPAKNRRKTATGRASV 269
Query: 317 LLVDRTFDLLTPCCH-GDSLVDRMFSSLPR 345
+ VDRT DL H GD+LV+++ S+LP+
Sbjct: 270 VFVDRTLDLTGAVGHHGDNLVEKIISALPQ 299
Score = 79 (32.9 bits), Expect = 2.2e-17, Sum P(3) = 2.2e-17
Identities = 30/129 (23%), Positives = 52/129 (40%)
Query: 15 KQISEHIKDAILYLDSGCTESFQLIGAFPVLLELGVRAVCCLENMSPLDSVVDWNSNIDP 74
+Q+ +K +++YLD+ C ES LLE C L P + + P
Sbjct: 15 EQVLAKVKWSVVYLDAACAESLHWSCGSSRLLEAVKGPACNLREFEP--HAIGGGAK-QP 71
Query: 75 MRKMVVMTSRLLSDAHRYIVRCLSASYGIRHCAIFTSISEIAHSAYTDSPLGPDAFHEYE 134
R + V++S L + + S+ +HC + T++S H P A E +
Sbjct: 72 -RAVFVLSSLLKGRIVDTLQDIICRSH-FQHCVVVTAVSHPVHLTANHVPAAAAAELEGQ 129
Query: 135 TLLLQDYEE 143
+ + EE
Sbjct: 130 QPVFEQLEE 138
>ZFIN|ZDB-GENE-050320-143 [details] [associations]
symbol:scfd2 "sec1 family domain containing 2"
species:7955 "Danio rerio" [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0006904 "vesicle docking involved in exocytosis"
evidence=IEA] InterPro:IPR001619 Pfam:PF00995
ZFIN:ZDB-GENE-050320-143 PANTHER:PTHR11679 GO:GO:0006904
SUPFAM:SSF56815 GeneTree:ENSGT00390000011192 EMBL:CU693368
EMBL:BX511028 EMBL:CABZ01039446 EMBL:CABZ01039447 EMBL:CABZ01039448
EMBL:CABZ01079987 EMBL:CABZ01079988 IPI:IPI00504666
Ensembl:ENSDART00000131132 Bgee:F1RBN1 Uniprot:F1RBN1
Length = 681
Score = 131 (51.2 bits), Expect = 7.0e-16, Sum P(3) = 7.0e-16
Identities = 76/354 (21%), Positives = 154/354 (43%)
Query: 445 EALLDRRMKDGTVLIKKWLQEALRQENLTVNVRSRPGSATKSELQAMIKALAKNQSSLVR 504
E +L + K+ + +++ L EA +ENL + + G T +L + ++ + +L
Sbjct: 337 ETMLVAKQKEAVIEVRRQLVEAASKENLPIKMSL--GRVTAEQLCSYVQLFRDSWGALES 394
Query: 505 NRGIIQFATAALAALDESHSARWDAFISAEKMLHVSAEDTSQSLAAQIGDLINKSCLVGS 564
+ G++Q AA AL RWDA ++ E++L + D+ LA + L+ L+ S
Sbjct: 395 HSGVLQLGLAAAQALRHPALQRWDACLAFERLLLQALGDSD--LAGVLKQLLP---LIKS 449
Query: 565 HDQKTRKMELSSRLLSFKDALLLTVTGYILAGENFPTSGSGGPFSWQEEHFLKEAIVDAI 624
+ T LS D L+L V Y +A E + +GG ++ +++ ++ A+
Sbjct: 450 SESGTGSD------LSMDDLLVLLVYVYSVAKE----ACTGGSEEEKQVEKVEQELIGAL 499
Query: 625 -FENPSEAKFKFLHEQQYN---DMQLKLELQDRV-DNLFKFLHKVSGLKRKNIPLRDSAF 679
E L ++ +L +E V +++F L V+ R ++ S F
Sbjct: 500 TLRLTRETTLSPLVQEVTGVSCPEELTMECAHSVLESMFGTLRGVARA-RDHLKNFSSVF 558
Query: 680 GSDSHFHGDSYASKGLLYKLLMKVLA--KSDVPGLEYHSS---------------TAKPS 722
H +Y + LL ++L ++ + + P +E+ S ++P
Sbjct: 559 TPGDGAHQATY--RPLLKQVLEEIFHPDRRECPDIEHMSGGLTELLKTGFSMFMKVSRPH 616
Query: 723 LADQNVILIFVIGGINGLEVHEALEALSESGRPDLELIXXXXXXXXPADMFDLL 776
+D ++ +F++GG+ E+ E +S + + ++I P+D+ LL
Sbjct: 617 PSDHPLLFLFLVGGVTPSELRLIREVVS-THKSGTQVIVMSTRLLRPSDVPRLL 669
Score = 114 (45.2 bits), Expect = 7.0e-16, Sum P(3) = 7.0e-16
Identities = 40/150 (26%), Positives = 74/150 (49%)
Query: 206 VHHFPMILCPLSPRVFVLPSEGSVAEAC-LSVEHEDSLSPVLPPIGTGLFSDGDDVPPGA 264
V H P++ PL+ + +LP+ ++ + +E + P G+ + D +PP
Sbjct: 145 VMHAPVVFAPLTEHLHLLPAFSNLFPLLDVDLESINEKRPEKKRFGSLMDMDVHSLPPEL 204
Query: 265 ---ILTAHLIYH-LASKMDLKMEIFSLGDLSKNVGKLLTDMSSLYDVGRRKRTA----GL 316
I T L + L + + E FS+G +S+ + T++++L R++TA +
Sbjct: 205 QIQIKTLALTLNGLFEFISTREESFSVGPMSRLIA---TELANLPQAKNRRKTAPNKASV 261
Query: 317 LLVDRTFDLLTPCCH-GDSLVDRMFSSLPR 345
+ VDRT DL H GD+L +++ S LP+
Sbjct: 262 VFVDRTLDLTGAVGHHGDNLAEKILSVLPQ 291
Score = 86 (35.3 bits), Expect = 7.0e-16, Sum P(3) = 7.0e-16
Identities = 29/128 (22%), Positives = 58/128 (45%)
Query: 15 KQISEHIKDAILYLDSGCTESFQLIGAFPVLLELGVRAVCCLENMSPLDSVVDWNSNIDP 74
+++ +K A++++D C+ES G +L E G R N+ S N +P
Sbjct: 16 EKVLSKVKKAVVFMDDRCSESLHWNGGAALLFEAGAR------NIKQFSSFEAGAQN-EP 68
Query: 75 MRKMVVMTSRLLSDAHRYIVRCLSASYGIRHCAIFTSISEIAH--SAYTDSPL-GPDAFH 131
K V + S +L I++ + + ++C +FT++ H + ++ L G F
Sbjct: 69 --KAVFVVSTVLKGRTADIIKDIISLSHFQYCVVFTTVPHSIHLLANNVNADLEGNPVFE 126
Query: 132 EYETLLLQ 139
++E L +
Sbjct: 127 QFEEKLCE 134
Score = 38 (18.4 bits), Expect = 2.2e-06, Sum P(3) = 2.2e-06
Identities = 7/22 (31%), Positives = 14/22 (63%)
Query: 702 KVLAKSDVPGLEYHSSTAKPSL 723
++L SDVP L +++ +P +
Sbjct: 658 RLLRPSDVPRLLFNTDRLRPDV 679
>UNIPROTKB|F1SE65 [details] [associations]
symbol:SCFD2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0006904 "vesicle docking involved in exocytosis"
evidence=IEA] InterPro:IPR001619 PANTHER:PTHR11679 GO:GO:0006904
OMA:VKRAVVY GeneTree:ENSGT00390000011192 EMBL:FP476000
EMBL:CU914364 Ensembl:ENSSSCT00000009672 Uniprot:F1SE65
Length = 547
Score = 132 (51.5 bits), Expect = 2.9e-15, Sum P(3) = 2.9e-15
Identities = 32/116 (27%), Positives = 62/116 (53%)
Query: 445 EALLDRRMKDGTVLIKKWLQEALRQENLTVNVRSRPGSATKSELQAMIKALAKNQSSLVR 504
EALL+ + K+ + +++ L EA +ENL + + G T +L + I+ N +L
Sbjct: 345 EALLNTKHKEAVMEVRRHLVEAASRENLPIKMSM--GRVTPGQLTSYIQLFKNNLKALGN 402
Query: 505 NRGIIQFATAALAALDESHSARWDAFISAEKMLHVSAEDTSQSLAA-QIGDLINKS 559
+ G++Q A + L +A+WD F++ E++L S +++ S+ Q+ +I S
Sbjct: 403 HCGLLQLGLATIQTLKHPQTAKWDNFLAFERLLLQSIGESTMSVVLNQLLPMIKPS 458
Score = 115 (45.5 bits), Expect = 2.9e-15, Sum P(3) = 2.9e-15
Identities = 40/150 (26%), Positives = 74/150 (49%)
Query: 206 VHHFPMILCPLSPRVFVLPSEGSVAEACLSVEHE-DSLSPVLPPIGTGLFSDGDDVPPGA 264
V H P++L P++P + + P+ S+ H + P +G+ D + P
Sbjct: 153 VLHIPLLLAPVAPHLALTPAFASLFPLLPQDVHILNGARPDKRRLGSLSEVDATALTPEL 212
Query: 265 ILTAH-LIYHLAS---KMDLKMEIFSLGDLSKNVGKLLTDMSSLYDVGRRKRTA----GL 316
+L L+ L+S + ++ E F++G LS+ + D+++ R++TA +
Sbjct: 213 LLQIRCLVSGLSSLCEHLGVREECFAVGSLSRIIA---ADLANFAPAKNRRKTATGRASV 269
Query: 317 LLVDRTFDLLTPCCH-GDSLVDRMFSSLPR 345
+ VDRT DL H GD+LV+++ S LP+
Sbjct: 270 VFVDRTLDLTGAVGHHGDNLVEKIISVLPQ 299
Score = 74 (31.1 bits), Expect = 2.9e-15, Sum P(3) = 2.9e-15
Identities = 31/130 (23%), Positives = 55/130 (42%)
Query: 15 KQISEHIKDAILYLDSGCTESFQL-IGAFPVLLELGVRAVCCLENMSPLDSVVDWNSNID 73
+Q+ +K A++YLD+ ES G+ +L +G A C L P + V ++
Sbjct: 15 EQVLAKVKRAVVYLDAASAESLHWGCGSSRLLEAVGSPA-CYLREFEP--AAVGGGAD-Q 70
Query: 74 PMRKMVVMTSRLLSDAHRYIVRCLSASYGIRHCAIFTSISEIAHSAYTDSPLGPDAFHEY 133
P K V + S LL +R + ++C + T+++ H P A E
Sbjct: 71 P--KAVFVLSCLLKGRTVETLRDIICRSHFQYCVVVTAVNHAVHLTANHVPAAAAAELEG 128
Query: 134 ETLLLQDYEE 143
+ + + EE
Sbjct: 129 QQPVFEQLEE 138
>UNIPROTKB|F1NVY6 [details] [associations]
symbol:SCFD2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0006904 "vesicle docking involved in exocytosis"
evidence=IEA] InterPro:IPR001619 PANTHER:PTHR11679 GO:GO:0006904
GeneTree:ENSGT00390000011192 EMBL:AADN02031295 EMBL:AADN02031296
EMBL:AADN02031297 IPI:IPI00582615 Ensembl:ENSGALT00000022599
OMA:IGESEMP Uniprot:F1NVY6
Length = 350
Score = 122 (48.0 bits), Expect = 2.0e-08, Sum P(2) = 2.0e-08
Identities = 46/185 (24%), Positives = 84/185 (45%)
Query: 445 EALLDRRMKDGTVLIKKWLQEALRQENLTVNVRSRPGSATKSELQAMIKALAKNQSSLVR 504
E+ ++ + K+ + ++ L EA +ENL + + G T +L + ++ N +L
Sbjct: 175 ESFMNLKQKEAVMEARRHLVEAASRENLPIKMSM--GEVTPEQLSSYVQLFKNNFKALEN 232
Query: 505 NRGIIQFATAALAALDESHSARWDAFISAEKML-HVSAEDTSQSLAAQIGDLINKSCLVG 563
+ G++Q AA+ L ++WD F++ E++L E S+ Q+ +I KS
Sbjct: 233 HCGLLQLVLAAVQTLKHPQISKWDNFLAFERLLLQTIGESEMPSVLNQLLPMI-KSYSER 291
Query: 564 SHDQKTRKMELSSRLLSFKDALLLTVTGYILAGENFPTSGSGGPFSWQEEHFLKEAIVDA 623
D T +D +L V Y + GE +G + EE +K+A+V A
Sbjct: 292 MQDDYT-----------CEDFFILLVYMYSVVGE----IRNGEELNKAEEE-VKKALVKA 335
Query: 624 IFENP 628
I + P
Sbjct: 336 ICDEP 340
Score = 84 (34.6 bits), Expect = 2.0e-08, Sum P(2) = 2.0e-08
Identities = 25/77 (32%), Positives = 40/77 (51%)
Query: 274 LASKMDLKMEIFSLGDLSKNVGKLLTDMSSLYDVGRRKRTAG----LLLVDRTFDLLTPC 329
L M ++ E F++G LS+ L +++ R+R A ++ VDRT DL
Sbjct: 56 LFGAMGVREECFAVGALSR---VLAAELAGFAPARNRRRAAANRASVVFVDRTLDLAGAV 112
Query: 330 CH-GDSLVDRMFSSLPR 345
H GDSL +++ S LP+
Sbjct: 113 GHHGDSLAEKILSVLPK 129
>DICTYBASE|DDB_G0277343 [details] [associations]
symbol:scfd2 "Sec1-like family protein" species:44689
"Dictyostelium discoideum" [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0006904 "vesicle docking involved in exocytosis"
evidence=IEA] [GO:0003674 "molecular_function" evidence=ND]
InterPro:IPR001619 dictyBase:DDB_G0277343 PANTHER:PTHR11679
GenomeReviews:CM000151_GR EMBL:AAFI02000019 GO:GO:0006904
SUPFAM:SSF56815 RefSeq:XP_642748.2 ProteinModelPortal:Q54ZW8
EnsemblProtists:DDB0234141 GeneID:8620938 KEGG:ddi:DDB_G0277343
InParanoid:Q54ZW8 OMA:TIPIQKS Uniprot:Q54ZW8
Length = 904
Score = 74 (31.1 bits), Expect = 9.3e-06, Sum P(7) = 9.3e-06
Identities = 17/63 (26%), Positives = 36/63 (57%)
Query: 282 MEIFSLGDLSKNVG-KLLTDMSSLYDVGRRK-RTAGLLLVDRTFDLLTPCCHGDSLVDRM 339
+ I+ +G S + ++ T ++++ + + LLL+DRT DL+ P H ++ +DR+
Sbjct: 279 LNIYPIGPFSSYLAHEIQTTLATITNQQQDDYHPISLLLIDRTLDLVGPSLHSENSMDRI 338
Query: 340 FSS 342
+ S
Sbjct: 339 YFS 341
Score = 71 (30.1 bits), Expect = 9.3e-06, Sum P(7) = 9.3e-06
Identities = 14/51 (27%), Positives = 30/51 (58%)
Query: 445 EALLDRRMKDGTVLIKKWLQEALRQENLTVNVRSRPGSATKSELQAMIKAL 495
++L+ + +KD +++K+ L E + +EN+ V++ S G L A++ L
Sbjct: 432 DSLITKSLKDVIMILKRRLVEIISKENINVDISSIAGPTNIQSLIALVNVL 482
Score = 63 (27.2 bits), Expect = 9.3e-06, Sum P(7) = 9.3e-06
Identities = 15/51 (29%), Positives = 27/51 (52%)
Query: 73 DPMRKMVVMTSRLLSDAHRYIVRCLSASYGIRHCAIFTSISEIAHSAYTDS 123
D ++V S L + +I + L Y I +C I+ +SE+AH ++ +S
Sbjct: 94 DINNRLVFFCSDYLWNCENHI-KSLLKIYSINNCIIYCGLSELAHISHPNS 143
Score = 54 (24.1 bits), Expect = 9.3e-06, Sum P(7) = 9.3e-06
Identities = 13/44 (29%), Positives = 21/44 (47%)
Query: 498 NQSSLVRNRGIIQFATAALAALDESHSARWDAFISAEKMLHVSA 541
N + R II+ A ++ S WD +S EK+L +S+
Sbjct: 513 NHMLMYRYNDIIEAVAAVEQTINLSSQFHWDQLLSIEKILLLSS 556
Score = 47 (21.6 bits), Expect = 9.3e-06, Sum P(7) = 9.3e-06
Identities = 9/28 (32%), Positives = 16/28 (57%)
Query: 725 DQNVILIFVIGGINGLEVHEALEALSES 752
D +LI+V+GGI E+ E + ++
Sbjct: 839 DNRKVLIYVLGGITFTELKELTDLFEKT 866
Score = 42 (19.8 bits), Expect = 9.3e-06, Sum P(7) = 9.3e-06
Identities = 17/56 (30%), Positives = 25/56 (44%)
Query: 542 EDTSQ-SLAAQIGDLINKSCLVGSHDQKTRKMELSSRLLSFKDALLLTVTGYILAG 596
ED S+ S+ +QI D+I G D K S ++ L+L V Y + G
Sbjct: 576 EDNSEPSILSQICDIIETPISGGGGDDK---------YYSIQEILILCVMAYSIKG 622
Score = 38 (18.4 bits), Expect = 9.3e-06, Sum P(7) = 9.3e-06
Identities = 11/40 (27%), Positives = 20/40 (50%)
Query: 192 DFYKEDVGQELVVSVHHFPMILCPLSP--RVFVLPSEGSV 229
D Y +D ++ ++ +FP LC P F +P + S+
Sbjct: 190 DEYYQDELPDISCTIKYFP--LCYSQPFKNFFTIPIQKSL 227
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.318 0.134 0.384 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 783 755 0.00090 121 3 11 22 0.40 34
37 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 9
No. of states in DFA: 620 (66 KB)
Total size of DFA: 362 KB (2180 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 64.42u 0.14s 64.56t Elapsed: 00:00:03
Total cpu time: 64.43u 0.15s 64.58t Elapsed: 00:00:03
Start: Tue May 21 16:23:42 2013 End: Tue May 21 16:23:45 2013