BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 003969
(783 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8L7S3|C3H24_ARATH Zinc finger CCCH domain-containing protein 24 OS=Arabidopsis
thaliana GN=At2g28450 PE=2 SV=1
Length = 809
Score = 799 bits (2063), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 430/778 (55%), Positives = 533/778 (68%), Gaps = 96/778 (12%)
Query: 26 PLQNADDEQIQPSIPQSTDDVTTTAAEKRKR--EDVATEGPQSESAEPSPSPSLHPLHKT 83
P++ + +++ S +TD++ EKRKR ED T S++ +PSP KT
Sbjct: 28 PMETSSIDELPSSDSNATDNIEA-VGEKRKRADEDEKTNLESSDTKITTPSP----WWKT 82
Query: 84 SLCSYFRKVGTCCHGSTCRYAHGEEELRIRPDNTWDPTSERAKKARKLEDGDKCEAKEDA 143
SLCSYFR+ +C HG+ C+YAHGE ELR++PDNTWDPTSER KKA+ ++ E +E
Sbjct: 83 SLCSYFRREASCSHGNECKYAHGEAELRMKPDNTWDPTSERGKKAKAMK---MSEHEEKE 139
Query: 144 VEEVMMTEAV---VDGDGDGD-----QDVELSKCLVHLPRKWHSDNLKKFLADHGILYKS 195
+EV+ TE + +DGD G D+ LSKCLVHLP KW SD LKKFL + G+LYKS
Sbjct: 140 EDEVLFTEQMMESIDGDEGGGGSVSVVDLSLSKCLVHLPNKWQSDELKKFLGEQGVLYKS 199
Query: 196 AKKKKGMTVGFVKFESVEQLKNAVEELEGISIGNKTLKVANVVPRSFDKNIKSPMTLSGN 255
AKK++GM VGFV FE+ EQL++ VE L+G ++ + LK+A+V+PR+FDKN +
Sbjct: 200 AKKRRGMIVGFVTFENAEQLQSGVEILDGKTVNSSNLKIADVLPRTFDKN---------D 250
Query: 256 AKQASESAVPGELAEAHASSNGHEDGNGNDEGLAGDGSGLKVKSARDVVTPLAHMSYSVQ 315
A+++ VKSARD VTPLA++SY+ Q
Sbjct: 251 ARKS-------------------------------------VKSARDAVTPLAYLSYADQ 273
Query: 316 LEHKKNSIAQMLKKLTRNARKACPNGVSLPEWIMKSREIGGLPCKLEGILGSPLVNGYRN 375
LE KK SI QMLKKL RNARKACPNG SLP+W++ SR+ GGL C LEGI+ SP+ NGYRN
Sbjct: 274 LEQKKTSIGQMLKKLARNARKACPNGNSLPQWVLTSRDRGGLACNLEGIIESPITNGYRN 333
Query: 376 KCEFSVGYSLQAKPTVGFMLGNFREGVTAVEEPVDCPNVSEIACKYASIFQEFLQQSDLP 435
KCEFSVG SLQ KPTVGF LG+F GVTAVEEPVDCPNVS+IA +YASIFQ+F++ S
Sbjct: 334 KCEFSVGLSLQGKPTVGFSLGSFCAGVTAVEEPVDCPNVSKIASQYASIFQKFIENSKFQ 393
Query: 436 VWNRFKNSGFWRQLTVREGRSPGKPLDVENLEVNISEVNISEVMLIAQVSSATFDDAVVN 495
VWNRF++SGFWRQLTVREGR PG N E I+ I+EVML+ QV D+A V
Sbjct: 394 VWNRFQHSGFWRQLTVREGRKPGV---FSNDEDAITR--IAEVMLMVQVCLTGSDEAEVA 448
Query: 496 SEFERLAKAFAAGATASSPSLPLTALVIQDHQGVSNVAPADAPLRLLSIPKADG---EPE 552
+EFE LAKAFA GA ASSP+LPLT LV+Q+H G+SNVAP DAPL++L+IP +D + +
Sbjct: 449 TEFEELAKAFAEGARASSPTLPLTVLVVQNHSGISNVAPPDAPLQVLAIPISDNGTDQEQ 508
Query: 553 ESNDVVEARIHDSISNLRFCISPTAFFQVNTLAAEKLYSLGGDWADLGPDTLLFDVCCGT 612
+N + EARIHD I+NLRF ISPTAFFQVNT+ AEKLYS+ GDWADLGPDTLLFDVCCGT
Sbjct: 509 TTNVLTEARIHDHINNLRFSISPTAFFQVNTVTAEKLYSIAGDWADLGPDTLLFDVCCGT 568
Query: 613 GTIGLTLAHRVGMVIGIEMNASAVSDAHRNAEINGIKNCRFVCAKAEDVMGSLLKDYLNP 672
GTIGLTLAHRVGMVIGIEMNASAV+DA RNA INGI NC+F+C+KAEDVM SLLK YL+
Sbjct: 569 GTIGLTLAHRVGMVIGIEMNASAVADAERNATINGISNCKFICSKAEDVMSSLLKQYLDV 628
Query: 673 LREED----EHASEGSNKEITIAEEKDSSRDNVPENEGCSGQDPENDIADSNCPEGSGK- 727
+ E+ +A++ NK+I EE +S +AD N P + +
Sbjct: 629 TQMEEAKPLSNANDDLNKQIPSTEEMTNSE----------------HVADQNLPPSNTQV 672
Query: 728 -EPQSQLQKDCTS-EGNSLAQP-FKNVVAIVDPPRGGLHPTVIKILRTHARLQRLLHI 782
E Q QKD +S E +P FKNVVAIVDPPR GLHP VIK LRTH RL+RL++I
Sbjct: 673 EELQDNEQKDSSSLEPEKTTKPQFKNVVAIVDPPRSGLHPAVIKALRTHPRLKRLVYI 730
>sp|Q8IZ69|TRM2A_HUMAN tRNA (uracil-5-)-methyltransferase homolog A OS=Homo sapiens
GN=TRMT2A PE=1 SV=2
Length = 625
Score = 191 bits (485), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 155/500 (31%), Positives = 218/500 (43%), Gaps = 82/500 (16%)
Query: 170 LVHLPRKWHSDNLKKFLADHGILYKSAKKKKGMTVGFVKFESVEQLKNAVEELEGISIGN 229
L ++PR ++++FL G+ K FV F S + A+ L G
Sbjct: 77 LQNVPRHASFSDVRRFLGRFGLQPHKTKLFGQPPCAFVTFRSAAERDKALRVLHGALWKG 136
Query: 230 KTLKVANVVPRSFDKNIKSPMTLSGNAKQASESAVPGELAEAHASSNGHEDGNGNDEGLA 289
+ L V P++ PM + +Q ES P
Sbjct: 137 RPLSVRLARPKA------DPM--ARRRRQEGESEPP------------------------ 164
Query: 290 GDGSGLKVKSARDVVTPLAHMSYSVQLEHKKNSIAQMLKKLTRNARKACPNGVSLPEWIM 349
V DVVTPL + Y+ QLE K+ Q+L+KL + N LP W++
Sbjct: 165 -------VTRVADVVTPLWTVPYAEQLERKQLECEQVLQKLAKEIGST--NRALLP-WLL 214
Query: 350 KSREIGGLPC-KLEGILGSPLVNGYRNKCEFSVGYSLQAKP-TVGFMLGNFREGVTAVEE 407
+ R C LEG+ SP YRNKCEF VG + + TVG LG ++ G AV
Sbjct: 215 EQRHKHNKACCPLEGVRPSPQQTEYRNKCEFLVGVGVDGEDNTVGCRLGKYKGGTCAVAA 274
Query: 408 PVDCPNVSEIACKYASIFQEFLQQSDLPVWNRFKNSGFWRQLTVREGRSPGKPLDVENLE 467
P D ++ E + FQEF++ + ++ +G W+QLTVR R
Sbjct: 275 PFDTVHIPEATKQVVKAFQEFIRSTPYSAYDPETYTGHWKQLTVRTSRR----------- 323
Query: 468 VNISEVNISEVMLIAQVSSATFDDAVVNSEFERLAKAFAAGATASSPSLPLTALVIQDHQ 527
+ M IA + LA+ F AG +S
Sbjct: 324 --------HQAMAIAYFHPQKLSPEELAELKTSLAQHFTAGPGRAS-------------- 361
Query: 528 GVSNVAPADAPLRLLSIPKADGEPEESNDVVEAR-IHDSISNLRFCISPTAFFQVNTLAA 586
GV+ + + R P +G P E V R IH+ + L F ISP AFFQVNT AA
Sbjct: 362 GVTCLYFVEEGQR--KTPSQEGLPLE--HVAGDRCIHEDLLGLTFRISPHAFFQVNTPAA 417
Query: 587 EKLYSLGGDWADLGPDTLLFDVCCGTGTIGLTLAHRVGMVIGIEMNASAVSDAHRNAEIN 646
E LY++ DWA L +++ DVCCGTGTIGL LA +V VIG+E+ AV DA NA+ N
Sbjct: 418 EVLYTVIQDWAQLDAGSMVLDVCCGTGTIGLALARKVKRVIGVELCPEAVEDARVNAQDN 477
Query: 647 GIKNCRFVCAKAEDVMGSLL 666
+ N F C +AED++ +L+
Sbjct: 478 ELSNVEFHCGRAEDLVPTLV 497
Score = 40.4 bits (93), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 25/34 (73%)
Query: 749 KNVVAIVDPPRGGLHPTVIKILRTHARLQRLLHI 782
+++VAI+DPPR GLH VI +R L+RLL++
Sbjct: 503 QHLVAILDPPRAGLHSKVILAIRRAKNLRRLLYV 536
>sp|Q96GJ1|TRM2_HUMAN tRNA (uracil(54)-C(5))-methyltransferase homolog OS=Homo sapiens
GN=TRMT2B PE=2 SV=1
Length = 504
Score = 172 bits (436), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 124/368 (33%), Positives = 175/368 (47%), Gaps = 43/368 (11%)
Query: 302 DVVTPLAHMSYSVQLEHKKNSIAQMLKKLTRNARKACPNGVSLPEWIMKSREIGGLPCKL 361
DVVTPL +SY QL+ K + ++L++L + NGVS+ + KS L C L
Sbjct: 86 DVVTPLWRLSYEEQLKVKFAAQKKILQRLESYIQML--NGVSVTTAVPKSER---LSCLL 140
Query: 362 EGILGSPLVNGYRNKCEFSVGYSLQAKP-TVGFMLGNFREGVTAVEEPVDCPNVSEIACK 420
I+ SP++NGYRNK FSV P TVGF LG +R+G + N+ E +
Sbjct: 141 HPIIPSPVINGYRNKSTFSVNRGPDGNPKTVGFYLGTWRDGNVVCVQSNHLKNIPEKHSQ 200
Query: 421 YASIFQEFLQQSDLPVWNRFKNSGFWRQLTVREGRSPGKPLDVENLEVNISEVNISEVML 480
A ++ FL+QS L F G+WR+LTVR M
Sbjct: 201 VAQYYEVFLRQSPLEPCLVFHEGGYWRELTVRTNSQ-------------------GHTMA 241
Query: 481 IAQVSSATFDDAVVNSEFERLAKAFAAGATASSPSLPLTALVIQDHQGVSNVAPADAPLR 540
I ++ + E + + F G A+ LT+L Q+ ++ + +P +
Sbjct: 242 IITFHPQKLSQEELHVQKEIVKEFFIRGPGAACG---LTSLYFQE-STMTRCSHQQSPYQ 297
Query: 541 LLSIPKADGEPEESNDVVEARIHDSISNLRFCISPTAFFQVNTLAAEKLYSLGGDWADLG 600
LL GEP I + + +L+ ISP AFFQ+NT AE LY G+ +
Sbjct: 298 LLF-----GEP---------YIFEELLSLKIRISPDAFFQINTAGAEMLYRTVGELTGVN 343
Query: 601 PDTLLFDVCCGTGTIGLTLAHRVGMVIGIEMNASAVSDAHRNAEINGIKNCRFVCAKAED 660
DT+L D+CCGTG IGL+LA V+GIE+ AV DA A NGI N F +AE
Sbjct: 344 SDTILLDICCGTGVIGLSLAQHTSRVLGIELLEQAVEDARWTAAFNGITNSEFHTGQAEK 403
Query: 661 VMGSLLKD 668
++ LLK
Sbjct: 404 ILPGLLKS 411
>sp|Q5RFM7|TRM2_PONAB tRNA (uracil(54)-C(5))-methyltransferase homolog OS=Pongo abelii
GN=TRMT2B PE=2 SV=1
Length = 486
Score = 172 bits (435), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 127/368 (34%), Positives = 179/368 (48%), Gaps = 43/368 (11%)
Query: 302 DVVTPLAHMSYSVQLEHKKNSIAQMLKKLTRNARKACPNGVSLPEWIMKSREIGGLPCKL 361
DVVTPL +SY QL+ K + ++L++L + NGVS+ + KS L C L
Sbjct: 68 DVVTPLWRLSYEEQLKVKFAAQKKILQRLESYIQML--NGVSVTTAVPKSER---LSCLL 122
Query: 362 EGILGSPLVNGYRNKCEFSVGYSLQAKP-TVGFMLGNFREGVTAVEEPVDCPNVSEIACK 420
I+ SP++NGYRNK FSV P TVGF LG +R+G + N+ E +
Sbjct: 123 HPIIPSPVINGYRNKSTFSVNRGPDGNPKTVGFYLGTWRDGNMVCVQSNHLKNIPEKHSQ 182
Query: 421 YASIFQEFLQQSDLPVWNRFKNSGFWRQLTVREGRSPGKPLDVENLEVNISEVNISEVML 480
A ++ FL+QS L F G+WR+LTVR S G + + + N+S+
Sbjct: 183 VAQYYEVFLRQSPLEPCLVFHEGGYWRELTVRTN-SQGHTMAI----ITFHPQNLSQEEF 237
Query: 481 IAQVSSATFDDAVVNSEFERLAKAFAAGATASSPSLPLTALVIQDHQGVSNVAPADAPLR 540
Q +V F R GA LT+L Q+ ++ + +P +
Sbjct: 238 HVQ-------KEIVKEFFIR-----GPGAACD-----LTSLYFQE-STMTRCSHQQSPYQ 279
Query: 541 LLSIPKADGEPEESNDVVEARIHDSISNLRFCISPTAFFQVNTLAAEKLYSLGGDWADLG 600
LL GEP I + + +L+ ISP AFFQ+NT AE LY G+ +
Sbjct: 280 LLF-----GEP---------YIFEELLSLKIRISPDAFFQINTAGAEMLYRTVGELTGVN 325
Query: 601 PDTLLFDVCCGTGTIGLTLAHRVGMVIGIEMNASAVSDAHRNAEINGIKNCRFVCAKAED 660
DT+L D+CCGTG IGL+L+ V+GIE+ AV DA A NGI N F +AE
Sbjct: 326 SDTILLDICCGTGVIGLSLSQHTSRVLGIELVEQAVEDARWTAAFNGITNSEFHTGRAEK 385
Query: 661 VMGSLLKD 668
++ LLK
Sbjct: 386 ILPGLLKS 393
>sp|Q8BQJ6|TRM2_MOUSE tRNA (uracil(54)-C(5))-methyltransferase homolog OS=Mus musculus
GN=Trmt2b PE=2 SV=1
Length = 493
Score = 162 bits (411), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 119/367 (32%), Positives = 170/367 (46%), Gaps = 43/367 (11%)
Query: 302 DVVTPLAHMSYSVQLEHKKNSIAQMLKKLTRNARKACPNGVSLPEWIMKSREIGGLPCKL 361
DVVTPL +SY QL+ K + ++L+ L + + +GVS + + + GL C L
Sbjct: 75 DVVTPLWRLSYEAQLKVKFEAQKKLLQSLESHLKVL--HGVSD---TVAAHQSEGLRCLL 129
Query: 362 EGILGSPLVNGYRNKCEFSVGYSLQAKP-TVGFMLGNFREGVTAVEEPVDCPNVSEIACK 420
I+ SP GYRNK FSV S P TVG+ LG +++G N+ E +
Sbjct: 130 HPIIPSPTTTGYRNKSTFSVYRSPDGNPKTVGYYLGTWKDGNVVCLPCNHLKNIPEKHSQ 189
Query: 421 YASIFQEFLQQSDLPVWNRFKNSGFWRQLTVREGRSPGKPLDVENLEVNISEVNISEVML 480
A ++ FL+QS + F G WR+L VR R M
Sbjct: 190 VAQYYEVFLRQSSVEPCLLFHEGGHWRELVVRTNRQ-------------------GHTMA 230
Query: 481 IAQVSSATFDDAVVNSEFERLAKAFAAGATASSPSLPLTALVIQDHQGVSNVAPADAPLR 540
I + V + L F G A LT+L Q+ ++ + +P +
Sbjct: 231 IVTFHPQGLSEEEVCVQKVTLKDFFTKGPGAICE---LTSLYFQE-STMTRCSHQQSPYQ 286
Query: 541 LLSIPKADGEPEESNDVVEARIHDSISNLRFCISPTAFFQVNTLAAEKLYSLGGDWADLG 600
LL GEP D++ +I ISP AFFQ+NT AE LY + G+ + +
Sbjct: 287 LLF-----GEPHIFEDLLGLKIR---------ISPDAFFQINTAGAEMLYRIIGELSGVN 332
Query: 601 PDTLLFDVCCGTGTIGLTLAHRVGMVIGIEMNASAVSDAHRNAEINGIKNCRFVCAKAED 660
++LL D+CCGTG IGL++A R V GIE+ AV DA A NG+ NC F +AE
Sbjct: 333 SESLLLDICCGTGVIGLSVAQRASQVHGIELVEQAVEDARWTAAFNGVTNCEFHAGRAET 392
Query: 661 VMGSLLK 667
++ LLK
Sbjct: 393 ILPQLLK 399
>sp|Q8BNV1|TRM2A_MOUSE tRNA (uracil-5-)-methyltransferase homolog A OS=Mus musculus
GN=Trmt2a PE=2 SV=1
Length = 574
Score = 161 bits (408), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 125/377 (33%), Positives = 172/377 (45%), Gaps = 41/377 (10%)
Query: 297 VKSARDVVTPLAHMSYSVQLEHKKNSIAQMLKKLTRNARKACPNGVSLPEWIMKSREIGG 356
V DVVTPL + Y+ QLE K+ ++L+KL + N LP +++ ++
Sbjct: 155 VTQIADVVTPLWTVPYTEQLEQKRLECERVLQKLAKEIGNT--NRALLPWLLLQRQQHNK 212
Query: 357 LPCKLEGILGSPLVNGYRNKCEFSVGYSLQAKP-TVGFMLGNFREGVTAVEEPVDCPNVS 415
C LEG+ SP YRNKCEF VG + K TVG LG ++ G AV P D ++
Sbjct: 213 ACCPLEGVKPSPQQTEYRNKCEFLVGVGVDGKDNTVGCRLGKYKGGTCAVAAPFDTVHIP 272
Query: 416 EIACKYASIFQEFLQQSDLPVWNRFKNSGFWRQLTVREGRSPGKPLDVENLEVNISEVNI 475
E + FQEF++ + ++ +G W+QLTVR
Sbjct: 273 EATKQVVKAFQEFIRSTPYSAYDPETYTGHWKQLTVRTSSR------------------- 313
Query: 476 SEVMLIAQVSSATFDDAVVNSEFERLAKAFAAGATASSPSLPLTALVIQDHQGVSNVAPA 535
+ M IA V L F G +S GV+++
Sbjct: 314 GQAMAIAYFHPQKLSSEEVAGLKASLVCHFMEGPGKAS--------------GVTSLYFV 359
Query: 536 DAPLRLLSIPKADGEPEESNDVVEARIHDSISNLRFCISPTAFFQVNTLAAEKLYSLGGD 595
+ R P +G P E + + I + + L F ISP AFFQVNT AAE LY++ +
Sbjct: 360 EEGQR--KTPSQEGLPLE-HMAGDQCIQEDLLGLTFRISPHAFFQVNTPAAEVLYTVIQE 416
Query: 596 WADLGPDTLLFDVCCGTGTIGLTLAHRVGMVIGIEMNASAVSDAHRNAEINGIKNCRFVC 655
WA L + + DVCCGTGTIGL LA +V V+GIE+ AV DA NA N K
Sbjct: 417 WAQLDGGSTVLDVCCGTGTIGLALAPKVKRVVGIELCQEAVEDARMNALTNDSKVI-LAI 475
Query: 656 AKAEDVMGSLLKDYLNP 672
KAE++ LL NP
Sbjct: 476 RKAENI-KRLLYVSCNP 491
>sp|A4QP75|TRM2B_DANRE tRNA (uracil(54)-C(5))-methyltransferase homolog-B OS=Danio rerio
GN=trmt2b PE=2 SV=2
Length = 480
Score = 131 bits (330), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 108/380 (28%), Positives = 169/380 (44%), Gaps = 69/380 (18%)
Query: 302 DVVTPLAHMSYSVQL----EHKKNSIAQMLKKLTRNARKACPNGVSLPEWIMKSREIGGL 357
D VTPL M+Y QL EH+K + +M+K+L+++ +A + ++ P
Sbjct: 68 DTVTPLWRMTYEDQLQWKYEHQKKILLKMMKELSQDPTRAFSDHLNFP------------ 115
Query: 358 PCKLEGILGSPLVNGYRNKCEFSVGYSLQAKP-TVGFMLGNFREGVTAVEEPVDCPNVSE 416
L I+ SP+ +GYRNK FSV + P T+GF +G + G V ++
Sbjct: 116 ---LLPIVASPVRDGYRNKSTFSVNKGIDGNPKTLGFYIGTGKAGNIVC---VHADHLLS 169
Query: 417 IACKY---ASIFQEFLQQSDLPVWNRFKNSGFWRQLTVREGRSPGKPLDVENLEVNISEV 473
I K+ A +++F++ S L F + G WR++T+R +
Sbjct: 170 IPSKHKMVARCYEDFIRLSPLRPCILFDDGGHWREITIRTNST----------------- 212
Query: 474 NISEVMLIAQVSSATFDDAVVNSEFERLAKAFAAGATASSPSLPLTALVIQDHQGVSNVA 533
M I + + L + F G A L +L Q+
Sbjct: 213 --GHTMAIVYFHPQSLTPEETDIHKAALVEYFTQGPGAICQ---LDSLYFQE-------- 259
Query: 534 PADAPLRLLSIPKADGEPEESNDVV-EARIHDSISNLRFCISPTAFFQVNTLAAEKLYSL 592
++ + E + + + I++ + +F ISP +FFQVN AAE LY
Sbjct: 260 --------TTMTRCSHEQSQYQLLYGQTHIYEEVLGFKFRISPDSFFQVNREAAEALYKT 311
Query: 593 GGDWADLGPDTLLFDVCCGTGTIGLTLAHRVGMVIGIEMNASAVSDAHRNAEINGIKNCR 652
+ + L DVCCGTG IG++L+ ++ VIGIE+ AV DA NA +N + NC
Sbjct: 312 VAELSQPCVGGTLLDVCCGTGAIGISLSPQMERVIGIELIEQAVEDAKFNAALNRVCNCE 371
Query: 653 FVCAKAE----DVMGSLLKD 668
F+ KAE D+MGSL D
Sbjct: 372 FLAGKAEVVLPDLMGSLSSD 391
Score = 37.7 bits (86), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 14/32 (43%), Positives = 24/32 (75%)
Query: 751 VVAIVDPPRGGLHPTVIKILRTHARLQRLLHI 782
+ A+V+P R GLH V++ LR H+ ++RL++I
Sbjct: 394 LTAVVNPSRAGLHYRVVRALRNHSAIRRLVYI 425
>sp|Q74I68|Y1698_LACJO Uncharacterized RNA methyltransferase LJ_1698 OS=Lactobacillus
johnsonii (strain CNCM I-12250 / La1 / NCC 533)
GN=LJ_1698 PE=3 SV=1
Length = 450
Score = 119 bits (298), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 99/356 (27%), Positives = 153/356 (42%), Gaps = 75/356 (21%)
Query: 307 LAHMSYSVQLEHKKNSIAQMLKKLTRNARKACPNGVSLPEWIMKSREIGGLPCKLEGILG 366
LAH+ Y QLE K+N + +L K + K G ++P
Sbjct: 82 LAHIKYDKQLEFKRNQVVNLLHKADLDNVKV---GQTMP--------------------- 117
Query: 367 SPLVNGYRNKCEFSVGYSLQAKPTVGFMLGNFREGVTAVEEPVDCPNVSEIACKYASIFQ 426
SP GYRNK + V + K +GF + + V P + + K I
Sbjct: 118 SPEETGYRNKAQVPVR-EVNGKLDIGFFRKHSHDLVPLTSFFTTDPEIDRVLIKVRDI-- 174
Query: 427 EFLQQSDLPVWNRFKNSGFWRQLTVREGRSPGKPLDVENLEVNISEVNISEVMLIAQVSS 486
L+++ +P ++ N G R L VR ++ G E+M+I
Sbjct: 175 --LRKNHVPAYDEIHNKGEVRYLEVRRSKATG------------------EIMVIL---- 210
Query: 487 ATFDDAVVNSEFERLAKAFAAGATASSPSLPLTALVIQDHQGVSNVAPADAPLRLLSIPK 546
++ +F +L + + +T++V+ + +NV L
Sbjct: 211 -----VCLHKDFPQLKEVTKEISEIKG----VTSVVLNHNPKKTNVILGKKDYLLW---- 257
Query: 547 ADGEPEESNDVVEARIHDSISNLRFCISPTAFFQVNTLAAEKLYSLGGDWADLGPDTLLF 606
GEP+ I D I ++ F ISP +FFQ+N+L +LY L ADL PD ++
Sbjct: 258 --GEPQ---------ITDKIGDVSFKISPQSFFQINSLQTPRLYDLAIQKADLKPDDVVI 306
Query: 607 DVCCGTGTIGLTLAHRVGMVIGIEMNASAVSDAHRNAEINGIKNCRFVCAKAEDVM 662
D G GTIGL++A V V G+E+ AV DA+ NA++NGI N +V KAE+VM
Sbjct: 307 DAYSGIGTIGLSVAKHVKAVRGMEVIEPAVEDANANAKLNGITNAEYVVGKAEEVM 362
>sp|Q8R918|Y1812_THETN Uncharacterized RNA methyltransferase TTE1812 OS=Thermoanaerobacter
tengcongensis (strain DSM 15242 / JCM 11007 / NBRC
100824 / MB4) GN=TTE1812 PE=3 SV=1
Length = 452
Score = 106 bits (265), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 104/367 (28%), Positives = 150/367 (40%), Gaps = 84/367 (22%)
Query: 307 LAHMSYSVQLEHKKNSIAQMLKKLTRNARKACPNGVSLPEWIMKSREIGGLPCKLEGILG 366
L H+SY QLE+K + L++ IG + K+ +G
Sbjct: 85 LQHLSYKGQLEYKTQKVKDNLER------------------------IGKIYTKVHYAIG 120
Query: 367 --SPLVNGYRNKCEFSVGYSLQAKPTVGFMLGNFREGVTAVEEPVD-CPNVSEIACKYAS 423
+PL YRNK +F VG + K T GF + E V PVD C ++ K S
Sbjct: 121 MENPL--NYRNKGQFVVGEIGREKIT-GFYSFHSHEIV-----PVDNCLIQHPLSNKVVS 172
Query: 424 IFQEFLQQSDLPVWNRFKNSGFWRQLTVREGRSPGKPLDVENLEVNISEVNISEVMLIAQ 483
+ +E+L + D+ V++R K G R + + G EVM I
Sbjct: 173 VVKEWLNECDISVYDRKKGKGLIRHVVAKVAFKTG------------------EVMAII- 213
Query: 484 VSSATFDDAVVNSEFERLAKAFAAGATASSPSLPLTALVIQDHQGVSNVAPADAPLRLLS 543
V+N E + P L L N+ + L +
Sbjct: 214 ---------VINGEDIPCKEELIEALKEKVPGLKSVIL---------NINTRRTKMILGN 255
Query: 544 IPKADGEPEESNDVVEAR--IHDSISNLRFCISPTAFFQVNTLAAEKLYSLGGDWADLGP 601
N V+ + I D I +LRF ISP +FFQVN + E LY ++A L
Sbjct: 256 ----------KNIVIYGKNTIEDFIKDLRFEISPLSFFQVNPIQTEILYDKAIEYAGLTG 305
Query: 602 DTLLFDVCCGTGTIGLTLAHRVGMVIGIEMNASAVSDAHRNAEINGIKNCRFVCAKAEDV 661
++ DV G GTI L A + V GIE AV DA +NA++NG+KN +F+ KAE
Sbjct: 306 KEVVIDVYSGIGTISLFAAKKASFVYGIESVKEAVEDAEKNAQVNGVKNVKFIWGKAERE 365
Query: 662 MGSLLKD 668
+ L K+
Sbjct: 366 IAKLYKE 372
>sp|Q8DUV4|Y788_STRMU Uncharacterized RNA methyltransferase SMU_788 OS=Streptococcus
mutans serotype c (strain ATCC 700610 / UA159)
GN=SMU_788 PE=3 SV=1
Length = 451
Score = 102 bits (253), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 97/378 (25%), Positives = 153/378 (40%), Gaps = 73/378 (19%)
Query: 295 LKVKSARDVVTPLAHMSYSVQLEHKKNSIAQMLKKLTRNARKACPNGVSLPEWIMKSREI 354
L V R + L H++Y QL K+ + L K+ G+S
Sbjct: 71 LTVDYLRTGIADLGHLTYGQQLNFKRKQVINSLSKIA---------GIS----------- 110
Query: 355 GGLPCKLEGILGSPLVNGYRNKCEFSVGYSLQAKPTVGFMLGNFREGVTAVEEPVDCPNV 414
++ LG YRNK + V + + GF FR+ A+ D
Sbjct: 111 ---DIEVADTLGMDNPTAYRNKAQVPVR-RVNGQLETGF----FRKNSHALMPIEDYYIQ 162
Query: 415 SEIACKYASIFQEFLQQSDLPVWNRFKNSGFWRQLTVREGRSPGKPLDVENLEVNISEVN 474
+ + + ++ L++ DL ++ + +G R L VR G G+ +
Sbjct: 163 DKEIDRLINFTRDLLRRFDLKPYDEKEQTGLIRNLVVRRGHYTGQIM------------- 209
Query: 475 ISEVMLIAQVSSATFDDAVVNSEFERLAKAFAAGATASSPSLPLTALVIQDHQGVSNVAP 534
+++ S F + E++ F P +IQ+ + A
Sbjct: 210 ----LVLVTTRSKIFR---IEQMIEKIISEF-----------PAVKSIIQNINDRNTNAI 251
Query: 535 ADAPLRLLSIPKADGEPEESNDVVEARIHDSISNLRFCISPTAFFQVNTLAAEKLYSLGG 594
+ R L GE D +E D++ R+ IS +F+QVNT+ AEKLY
Sbjct: 252 FGSEFRTLY-----GE-----DTIE----DTMLGNRYIISAQSFYQVNTVMAEKLYQTAI 297
Query: 595 DWADLGPDTLLFDVCCGTGTIGLTLAHRVGMVIGIEMNASAVSDAHRNAEINGIKNCRFV 654
D++DL PD + D G GTIGL+ A +V V G+E+ +AV DA +NA +N I N +V
Sbjct: 298 DFSDLTPDDTVIDAYSGIGTIGLSFAKKVKDVYGVEVIEAAVRDAEKNAALNNITNVHYV 357
Query: 655 CAKAEDVMGSLLKDYLNP 672
AE M S K + P
Sbjct: 358 ADSAEKAMASWSKRGIKP 375
>sp|Q6MAY1|Y1544_PARUW Uncharacterized RNA methyltransferase pc1544 OS=Protochlamydia
amoebophila (strain UWE25) GN=pc1544 PE=3 SV=1
Length = 442
Score = 100 bits (250), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 89/289 (30%), Positives = 127/289 (43%), Gaps = 32/289 (11%)
Query: 373 YRNKCEFSVGYSLQAKPTVGFMLGNFREGVTAVEEPVDCPNVSEIACKYASIFQEFLQQS 432
YRNK E + + +G ++ R V ++E C + + A Q++ S
Sbjct: 95 YRNKMELTFSSDKAGRRYLGLIMQGTRGHVFQMKE---CLLANGWFAQAARAIQKWWDNS 151
Query: 433 DLPVWNRFKNSGFWRQLTVREGRSPGKPLDVENLEVNISEVNISEVMLIAQVSSATFDDA 492
D+ ++ K+ G R LT+REG G L VML S D A
Sbjct: 152 DVQAYHAIKDRGSLRTLTLREGLRTGDRL----------------VMLTV---SGNPDYA 192
Query: 493 VVNSEFERLAKAFAAGATASSPSLPLTALVIQDHQGVSNVAPADAPLRLLSIPKADGEPE 552
+ S+ + + S+ L+ V Q ++ P + LL P E
Sbjct: 193 LTKSQLQSFVQVLRDSIELSNSDQKLS--VFLRIQQIAKGRPTNFYEMLLYGPDHIREKL 250
Query: 553 ESNDVVEARIHDSISNLRFCISPTAFFQVNTLAAEKLYSLGGDWADLGPDTLLFDVCCGT 612
D EA I L F ISP+AFFQ NT AEKLYS ADL +++D+ CGT
Sbjct: 251 YLPDFNEA-----IQTLNFRISPSAFFQPNTEQAEKLYSQALKLADLSASHVVYDLYCGT 305
Query: 613 GTIGLTLAHRVGMVIGIEMNASAVSDAHRNAEINGIKNCRFVCAKAEDV 661
GT+G+ A V VIGIE++ +V DA N + NG+ N V K+ DV
Sbjct: 306 GTLGICSAKYVKEVIGIELSRESVLDARENVKENGLSN---VTIKSGDV 351
>sp|Q891A0|Y2481_CLOTE Uncharacterized RNA methyltransferase CTC_02481 OS=Clostridium
tetani (strain Massachusetts / E88) GN=CTC_02481 PE=3
SV=1
Length = 460
Score = 100 bits (250), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 83/360 (23%), Positives = 146/360 (40%), Gaps = 74/360 (20%)
Query: 307 LAHMSYSVQLEHKKNSIAQMLKKLTRNARKACPNGVSLPEWIMKSREIGGLPCKLEGILG 366
L HMSY QL K+ + L +L GG+ ++E +LG
Sbjct: 88 LQHMSYKEQLNFKRQKVKDALLRL------------------------GGIDVEVEEVLG 123
Query: 367 SPLVNGYRNKCEFSVGYSLQAKPTVGFMLGNFREGVTAVEEPVDCPNVSEIACKYASIFQ 426
YRNK + +G + K +GF + + + C E A K I +
Sbjct: 124 MENPYRYRNKVQLPIGKE-KGKVNIGF----YAPRSHNIIDLKSCFIQDEKADKIIKILK 178
Query: 427 EFLQQSDLPVWNRFKNSGFWRQLTVREGRSPGKPLDVENLEVNISEVNISEVMLIAQVSS 486
E++++ ++ +++ ++ G R + VR G+ + ++L+ +
Sbjct: 179 EWIEKFNVSIYDEKEHKGNLRHIMVRTAFRTGQIM----------------IVLVTKDKK 222
Query: 487 ATFDDAVVNSEFERLAKAFAAGATASSPSLPLTALVIQDHQGVSNVAPADAPLRLLSIPK 546
+ ++N E L + +S +NV + L
Sbjct: 223 LPHKEELINKLTEDLEGVVSIIQNMNSQK--------------TNVVLGKESIVLWG--- 265
Query: 547 ADGEPEESNDVVEARIHDSISNLRFCISPTAFFQVNTLAAEKLYSLGGDWADLGPDTLLF 606
+ +I D I N +F I+P +FFQVN + E LY+ ++ADL D ++F
Sbjct: 266 ------------KDKIIDYIGNFKFAITPLSFFQVNPIQTEVLYNKALEYADLKGDEVVF 313
Query: 607 DVCCGTGTIGLTLAHRVGMVIGIEMNASAVSDAHRNAEINGIKNCRFVCAKAEDVMGSLL 666
D CGTGTI L L+ + V G+E+ A+ A NA N + N F+ ++E ++ L+
Sbjct: 314 DAYCGTGTISLFLSQKAKKVYGVEIVNEAIESAKLNARENNVDNVDFIVGESEQIIPELI 373
>sp|Q8E0T7|Y633_STRA5 Uncharacterized RNA methyltransferase SAG0633 OS=Streptococcus
agalactiae serotype V (strain ATCC BAA-611 / 2603 V/R)
GN=SAG0633 PE=3 SV=1
Length = 451
Score = 99.8 bits (247), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 104/416 (25%), Positives = 165/416 (39%), Gaps = 77/416 (18%)
Query: 261 ESAVPGELAEAHASSNGHEDGNGN-DEGLAGD---GSGLKVKSARDVVTPLAHMSYSVQL 316
E+A+PGE+ + G G +E L GL R + L H++Y QL
Sbjct: 33 ENALPGEIIKMRVLKLRKRIGYGKVEEYLTTSPHRNEGLDYTYLRTGIADLGHLTYEQQL 92
Query: 317 EHKKNSIAQMLKKLTRNARKACPNGVSLPEWIMKSREIGGLPCKLEGILGSPLVNGYRNK 376
K+ +A L K+ + +E LG + YRNK
Sbjct: 93 LFKQKQVADNLYKIAHIS-----------------------DVLVEPTLGMTIPLAYRNK 129
Query: 377 CEFSVGYSLQAKPTVGFMLGNFREGVTAVEEPVDCPNVSEIACKYASIFQEFLQQSDLPV 436
+ V + + GF N V+ + + + + + ++ L++ D+
Sbjct: 130 AQVPVR-RVDGQLETGFFRKNSHTLVSIEDYLIQEKEIDALI----NFTRDLLRKFDVKP 184
Query: 437 WNRFKNSGFWRQLTVREGRSPGKPLDVENLEVNISEVNISEVMLIAQVSSATFDDAVVNS 496
++ + SG R L VR G G+ + +++ F ++
Sbjct: 185 YDEEQQSGLIRNLVVRRGHYTGQLM-----------------LVLVTTRPKIFR---IDQ 224
Query: 497 EFERLAKAFAAGATASSPSLPLTALVIQDHQGVSNVAPADAPLRLLSIPKADGEPEESND 556
E+L AF PS+ I D SNV I + +D
Sbjct: 225 MIEKLVSAF--------PSVVSIMQNINDRN--SNV-----------IFGKEFRTLYGSD 263
Query: 557 VVEARIHDSISNLRFCISPTAFFQVNTLAAEKLYSLGGDWADLGPDTLLFDVCCGTGTIG 616
+E D + + IS +F+QVNT AEKLY D++DL + ++ D G GTIG
Sbjct: 264 TIE----DQMLGNTYAISAQSFYQVNTEMAEKLYQKAIDFSDLNSEDIVIDAYSGIGTIG 319
Query: 617 LTLAHRVGMVIGIEMNASAVSDAHRNAEINGIKNCRFVCAKAEDVMGSLLKDYLNP 672
L++A +V V G+E+ AVSDA NA NGI N +V AE+ M LK+ + P
Sbjct: 320 LSVAKQVKHVYGVEVVEKAVSDAKENATRNGITNSTYVADSAENAMAKWLKEGIKP 375
>sp|Q8E6F5|Y613_STRA3 Uncharacterized RNA methyltransferase gbs0613 OS=Streptococcus
agalactiae serotype III (strain NEM316) GN=gbs0613 PE=3
SV=1
Length = 451
Score = 99.8 bits (247), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 104/416 (25%), Positives = 165/416 (39%), Gaps = 77/416 (18%)
Query: 261 ESAVPGELAEAHASSNGHEDGNGN-DEGLAGD---GSGLKVKSARDVVTPLAHMSYSVQL 316
E+A+PGE+ + G G +E L GL R + L H++Y QL
Sbjct: 33 ENALPGEIIKMRVLKLRKRIGYGKVEEYLTTSPHRNEGLDYTYLRTGIADLGHLTYEQQL 92
Query: 317 EHKKNSIAQMLKKLTRNARKACPNGVSLPEWIMKSREIGGLPCKLEGILGSPLVNGYRNK 376
K+ +A L K+ + +E LG + YRNK
Sbjct: 93 LFKQKQVADNLYKIAHIS-----------------------DVLVEPTLGMTIPLAYRNK 129
Query: 377 CEFSVGYSLQAKPTVGFMLGNFREGVTAVEEPVDCPNVSEIACKYASIFQEFLQQSDLPV 436
+ V + + GF N V+ + + + + + ++ L++ D+
Sbjct: 130 AQVPVR-RVDGQLETGFFRKNSHTLVSIEDYLIQEKEIDALI----NFTRDLLRKFDVKP 184
Query: 437 WNRFKNSGFWRQLTVREGRSPGKPLDVENLEVNISEVNISEVMLIAQVSSATFDDAVVNS 496
++ + SG R L VR G G+ + +++ F ++
Sbjct: 185 YDEEQQSGLIRNLVVRRGHYTGQLM-----------------LVLVTTRPKIFR---IDQ 224
Query: 497 EFERLAKAFAAGATASSPSLPLTALVIQDHQGVSNVAPADAPLRLLSIPKADGEPEESND 556
E+L AF PS+ I D SNV I + +D
Sbjct: 225 MIEKLVSAF--------PSVVSIMQNINDRN--SNV-----------IFGKEFRTLYGSD 263
Query: 557 VVEARIHDSISNLRFCISPTAFFQVNTLAAEKLYSLGGDWADLGPDTLLFDVCCGTGTIG 616
+E D + + IS +F+QVNT AEKLY D++DL + ++ D G GTIG
Sbjct: 264 TIE----DQMLGNTYAISAQSFYQVNTEMAEKLYQKAIDFSDLNSEDIVIDAYSGIGTIG 319
Query: 617 LTLAHRVGMVIGIEMNASAVSDAHRNAEINGIKNCRFVCAKAEDVMGSLLKDYLNP 672
L++A +V V G+E+ AVSDA NA NGI N +V AE+ M LK+ + P
Sbjct: 320 LSVAKQVKHVYGVEVVEKAVSDAKENATRNGITNSTYVADSAENAMAKWLKEGIKP 375
>sp|Q97J51|Y1435_CLOAB Uncharacterized RNA methyltransferase CA_C1435 OS=Clostridium
acetobutylicum (strain ATCC 824 / DSM 792 / JCM 1419 /
LMG 5710 / VKM B-1787) GN=CA_C1435 PE=3 SV=1
Length = 456
Score = 98.6 bits (244), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 86/301 (28%), Positives = 133/301 (44%), Gaps = 47/301 (15%)
Query: 363 GILGSPLVNGYRNKCEFSVG-YSLQAKPTVGFMLGNFREGVTAVEEPVDCPNVSEIACKY 421
GILGSP YRNK E++ G + + T+G N G + V C V E
Sbjct: 117 GILGSPEKEEYRNKMEYTFGDFVKGGELTLGMHAKN--SGFSIVNTD-KCNIVDEDFRII 173
Query: 422 ASIFQEFLQQSDLPVWNRFKNSGFWRQLTVREGRSPGKPLDVENLEVNISEVNISEVMLI 481
E+ ++ DLP++ ++ G+ R L VR+ ++ G+ +LI
Sbjct: 174 LKTVVEYFRKKDLPIYKVMQHVGYLRNLVVRKAKNTGE-------------------ILI 214
Query: 482 AQVSSATFDDAVVNSEFERLAKAFAAGATASSPSLPLTALVIQDHQGVSNVAPADAPLRL 541
A V+++ D + +E + K+ L VI D G++++ D + L
Sbjct: 215 ALVTTSQVDFDL--TELTEILKSINYLG-----ELKGILHVIND--GLADMVRGDKIVTL 265
Query: 542 LSIPKADGEPEESNDVVEARIHDSISNLRFCISPTAFFQVNTLAAEKLYSLGGDWADLGP 601
D + RI D L+F IS +FFQ N+ AEKLYS ++
Sbjct: 266 FG-----------QDYITERILD----LKFKISLFSFFQTNSKGAEKLYSEVLEFLGDVS 310
Query: 602 DTLLFDVCCGTGTIGLTLAHRVGMVIGIEMNASAVSDAHRNAEINGIKNCRFVCAKAEDV 661
+ +FD+ CGTGTIG + + VIGIE+ AV A N ++N I NC F+ V
Sbjct: 311 NKTVFDLYCGTGTIGQLASKKAEKVIGIELIEEAVEAAKENTKLNNISNCSFIAGDVAKV 370
Query: 662 M 662
+
Sbjct: 371 I 371
>sp|Q8R933|Y1797_THETN Uncharacterized RNA methyltransferase TTE1797 OS=Thermoanaerobacter
tengcongensis (strain DSM 15242 / JCM 11007 / NBRC
100824 / MB4) GN=TTE1797 PE=3 SV=1
Length = 450
Score = 96.7 bits (239), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 92/349 (26%), Positives = 156/349 (44%), Gaps = 76/349 (21%)
Query: 309 HMSYSVQLEHKKNSIAQMLKKLTRNARKACPNGVSLPEWIMKSREIGGLPCKLEGILGSP 368
++SY QL+ KK+ + ++L+K G+ E++ GI SP
Sbjct: 84 NLSYENQLKIKKDVVLKLLEK----------EGIKDFEFL--------------GIERSP 119
Query: 369 LVNGYRNKCEFSVGYSLQAKPTVGFML-GNFREGVTAVEEPVDCPNVSEIACKYASIFQE 427
V GYRNK E++ G + K +G G F + V + C V E K S+
Sbjct: 120 KVYGYRNKMEYTFGTDREGKKALGLHRKGKFYDVVMTDK----CNIVDEDFTKALSLTFN 175
Query: 428 FLQQSDLPVWNRFKNSGFWRQLTVREGRSPGKPLDVENLEVNISEVNISEVMLIAQVSSA 487
+ + +LP +++ + G+ R L VR+ G+ +LI V++
Sbjct: 176 YALEKNLPFYDKKTHEGYLRYLVVRKASKNGE-------------------LLINIVTTT 216
Query: 488 TFDDAVVNSEFERLAKAFAAGATASSPSLPLTALVIQDHQGVSNVAPADAPLRLLSIPKA 547
+ +F+ L + + + +S+ LV H N + +DA +
Sbjct: 217 Q-----LKHKFDDLVELYRSANFSST-------LVGVLHT--YNDSWSDAVIC------- 255
Query: 548 DGEPEESNDVVEAR--IHDSISNLRFCISPTAFFQVNTLAAEKLYSLGGDWADLGPDTLL 605
E +V+ R + + + L+F IS +FFQ N+ AE++YS ++A + +
Sbjct: 256 -----EKLEVLYGRDYLIEELLGLKFKISAFSFFQTNSYGAERIYSTVREFAGDVSNKTI 310
Query: 606 FDVCCGTGTIGLTLAHRVGMVIGIEMNASAVSDAHRNAEINGIKNCRFV 654
FD+ CGTGTIG+ +A VIGIE+ AV A NA +NG++N F+
Sbjct: 311 FDLYCGTGTIGIVMAPLARKVIGIELVEEAVFSAKENAALNGLENAVFI 359
>sp|Q88XP4|Y1151_LACPL Uncharacterized RNA methyltransferase lp_1151 OS=Lactobacillus
plantarum (strain ATCC BAA-793 / NCIMB 8826 / WCFS1)
GN=lp_1151 PE=3 SV=1
Length = 457
Score = 96.3 bits (238), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 94/371 (25%), Positives = 151/371 (40%), Gaps = 78/371 (21%)
Query: 304 VTPLAHMSYSVQLEHKKNSIAQMLKKLTRNARKACPNGVSLPEWIMKSREIGGLPCKLEG 363
+ PL H+ YS QL+ K++ +A++ K+ + + P IG
Sbjct: 85 IAPLQHLEYSEQLKFKQHQVAELFAKVHMDDVEVLPT-------------IG-------- 123
Query: 364 ILGSPLVNGYRNKCEFSVGYSLQAKPTVGFMLGNFREGVTAVEEPVDCPNVSEIACKYAS 423
+ +P YRNK + V +Q + T GF N + + + + P + K
Sbjct: 124 -MANP--TQYRNKAQVPVR-QVQGQLTTGFYKKNSHQLMPIEDYYIQDPAID----KAIV 175
Query: 424 IFQEFLQQSDLPVWNRFKNSGFWRQLTVREGRSPGKPLDVENLEVNISEVNISEVMLIAQ 483
+ ++ L++ ++ F +SG R + VR G + + V+++ +
Sbjct: 176 VVRDILRKYHEAAYDEFHHSGTIRTIMVRRGYYSHEMM----------------VVIVTR 219
Query: 484 VSSATFDDAVVNSEFERLAKAFAAGATASSPSLPLTALVIQDHQGVSNVAPADAPLRLLS 543
D VV E + +LP VIQ NV + L
Sbjct: 220 TKHLPMAD-VVTQEIQ--------------AALPEVVSVIQ------NVNSKKTNVILGP 258
Query: 544 IPKADGEPEESNDVV--EARIHDSISNLRFCISPTAFFQVNTLAAEKLYSLGGDWADLGP 601
+ N+V+ +A I D + L F IS +F+QVN EKLY L D A L
Sbjct: 259 V----------NNVLAGKATIDDQLLGLTFAISAQSFYQVNPQQTEKLYQLAIDQAGLTG 308
Query: 602 DTLLFDVCCGTGTIGLTLAHRVGMVIGIEMNASAVSDAHRNAEINGIKNCRFVCAKAEDV 661
+ + D G GTI LT+A V G+E+ +A+ +A +NA+ NGI N FV AE
Sbjct: 309 NETVIDAYSGIGTISLTMAQHAKQVYGVEIVPAAIDNARQNADKNGITNATFVLDSAEKA 368
Query: 662 MGSLLKDYLNP 672
M D + P
Sbjct: 369 MAKWQADGVKP 379
>sp|Q97LN4|Y523_CLOAB Uncharacterized RNA methyltransferase CA_C0523 OS=Clostridium
acetobutylicum (strain ATCC 824 / DSM 792 / JCM 1419 /
LMG 5710 / VKM B-1787) GN=CA_C0523 PE=3 SV=1
Length = 460
Score = 95.9 bits (237), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 88/370 (23%), Positives = 149/370 (40%), Gaps = 79/370 (21%)
Query: 307 LAHMSYSVQLEHKKNSIAQMLKKLTR----NARKACPNGVSLPEWIMKSREIGGLPCKLE 362
L H+ Y+ QLE KKN + + LK++ + + R G+ P +
Sbjct: 88 LQHLKYTEQLEFKKNKVVECLKRIGKLDLSSVRINETIGMEDPYF--------------- 132
Query: 363 GILGSPLVNGYRNKCEFSVGYSLQAKPTVGFMLGNFREGVTAVEEPVDCPNVSEIACKYA 422
YRNK + VG + + +GF +RE + E C + A +
Sbjct: 133 ----------YRNKVQLPVGET-AGEAKIGF----YRERSHEIIEVDKCFIQDDSANEII 177
Query: 423 SIFQEFLQQSDLPVWNRFKNSGFWRQLTVREGRSPGKPLDVENLEVNISEVNISEVMLIA 482
+ + ++++ ++ +N + G R + +R+ G ++ML+
Sbjct: 178 LLIKRWIKEFNIEGYNEYSGKGTLRHIMIRKAFKTG------------------QIMLVL 219
Query: 483 QVSSATFDDAVVNSEFERLAKAFAAGATASSPSLPLTALVIQDHQGVSNVAPADAPLRLL 542
V N+E K T + I + + +NV + L
Sbjct: 220 ----------VTNTENVPHKKELIHMITTEIQGIKGIIQNINNKK--TNVILGQREITLW 267
Query: 543 SIPKADGEPEESNDVVEARIHDSISNLRFCISPTAFFQVNTLAAEKLYSLGGDWADLGPD 602
E+ I D I +F IS +FFQVN + EKLYS +A L
Sbjct: 268 G---------------ESTIEDYIGEFKFNISSKSFFQVNPIQTEKLYSAALKYAGLTGK 312
Query: 603 TLLFDVCCGTGTIGLTLAHRVGMVIGIEMNASAVSDAHRNAEINGIKNCRFVCAKAEDVM 662
++FD CGTGTI L L+ V G+E+ A+ +A NA+ NGI+N F+ K+E+ +
Sbjct: 313 EVVFDAYCGTGTISLFLSQNAKKVYGVEIIPEAIENAKINAKQNGIENTEFIVGKSEEEI 372
Query: 663 GSLLKDYLNP 672
L++ + P
Sbjct: 373 PKLIEKGIAP 382
>sp|Q99Z86|Y1346_STRP1 Uncharacterized RNA methyltransferase SPy_1346/M5005_Spy1098
OS=Streptococcus pyogenes serotype M1 GN=SPy_1346 PE=3
SV=1
Length = 462
Score = 95.9 bits (237), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 98/417 (23%), Positives = 165/417 (39%), Gaps = 79/417 (18%)
Query: 261 ESAVPGELAEAHASSNGHEDGNGNDEGL----AGDGSGLKVKSARDVVTPLAHMSYSVQL 316
++A+P E+ + G G E + + + + R + L H++Y QL
Sbjct: 44 DNALPEEVIDMRVLKVNKNSGFGKVEAYHYLSSARNADVNLTYLRTGIADLGHLTYEDQL 103
Query: 317 EHKKNSIAQMLKKLTRNARKACPNGVSLPEWIMKSREIGGLPCKLEGILGSPLVNGYRNK 376
KK + L K+ G+S +E +G YRNK
Sbjct: 104 TFKKKQVQDSLYKIA---------GIS--------------DVTVESTIGMTEPLAYRNK 140
Query: 377 CEFSVGYSLQAKPTVGFMLGNFREGVTAVEEPVDCPNVSEIACKYASIFQEFLQQSDLPV 436
+ V + + GF + + + + + + + + ++ L++ D+
Sbjct: 141 AQVPVR-RVNGQLETGFFRKHSHDLIPISDYYIQDKEIDRLI----NFTRDLLRRFDIKP 195
Query: 437 WNRFKNSGFWRQLTVREGRSPGKPLDVENLEVNISEVNISEVMLIAQVSS-ATFDDAVVN 495
++ + +G R + VR G G E+ML+ + F V+
Sbjct: 196 YDETEQTGLLRNIVVRRGHYSG------------------EMMLVLVTTRPKVFR---VD 234
Query: 496 SEFERLAKAFAAGATASSPSLPLTALVIQDHQGVSNVAPADAPLRLLSIPKADGEPEESN 555
E++ +AF P +IQ N+ + +I D +
Sbjct: 235 QVIEKIVEAF-----------PAVVSIIQ------NINDKNTN----AIFGKDFKTLYGK 273
Query: 556 DVVEARIHDSISNLRFCISPTAFFQVNTLAAEKLYSLGGDWADLGPDTLLFDVCCGTGTI 615
D I DS+ + IS +F+QVNT+ AEKLY ++DL D ++ D G GTI
Sbjct: 274 DT----ITDSMLGNNYAISAQSFYQVNTVMAEKLYQTAIAFSDLSKDDIVIDAYSGIGTI 329
Query: 616 GLTLAHRVGMVIGIEMNASAVSDAHRNAEINGIKNCRFVCAKAEDVMGSLLKDYLNP 672
GL+ A V V G+E+ +AV DA +NA +NGI N FV AE M + KD + P
Sbjct: 330 GLSFAKTVKAVYGVEVIEAAVRDAQQNAALNGITNAYFVADTAEHAMATWAKDGIKP 386
>sp|Q8ES75|Y768_OCEIH Uncharacterized RNA methyltransferase OB0768 OS=Oceanobacillus
iheyensis (strain DSM 14371 / JCM 11309 / KCTC 3954 /
HTE831) GN=OB0768 PE=3 SV=1
Length = 459
Score = 95.1 bits (235), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 89/367 (24%), Positives = 150/367 (40%), Gaps = 74/367 (20%)
Query: 307 LAHMSYSVQLEHKKNSIAQMLKKLTRNARKACPNGVSLPEWIMKSREIGGLPCKLEGILG 366
L HMSY +QL+ K+ + ++KK+ + +P + ILG
Sbjct: 87 LQHMSYDLQLQMKQGQVHNVMKKVAH---------------------LDQVP--VHPILG 123
Query: 367 SPLVNGYRNKCEFSVGYSLQAKPTVGFMLGNFREGVTAVEEPVDCPNVSEIACKYASIF- 425
+ YRNK + VG + VGF +++ + + D ++ + A F
Sbjct: 124 MEEPSHYRNKVQIPVGEK-NGEVIVGF----YQKRSHRILQNQDTCHIQDEAINEVLPFT 178
Query: 426 QEFLQQSDLPVWNRFKNSGFWRQLTVREGRSPGKPLDVENLEVNISEVNISEVMLIAQVS 485
++ + + + ++ + G R + VR G ++M++
Sbjct: 179 RQLMNKYGIQAYDEKSHRGQLRHIMVRVGHY------------------TKDIMIVFVTK 220
Query: 486 SATFDDAVVNSEFERLAKAFAAGATASSPSLPLTALVIQDHQGVSNVAPADAPLRLLSIP 545
++ F E +R+ K T P + + D + +NV L
Sbjct: 221 TSKF------PEKDRIIKEL----TEQFPQVKSIVQNVNDQR--TNVVLGKKTKVLWG-- 266
Query: 546 KADGEPEESNDVVEARIHDSISNLRFCISPTAFFQVNTLAAEKLYSLGGDWADLGPDTLL 605
E I+D I +L F ISP +FFQVN + + LY ++A++ D ++
Sbjct: 267 -------------ENYIYDKIGDLTFAISPKSFFQVNPVQTKVLYDKALEYANIDKDDVV 313
Query: 606 FDVCCGTGTIGLTLAHRVGMVIGIEMNASAVSDAHRNAEINGIKNCRFVCAKAEDVMGSL 665
D CG G+I L LA + V GIE+ A+ DA NAEING+ N F +AE VM
Sbjct: 314 IDAYCGIGSISLFLAQKAKKVYGIEVVPEAIEDAKMNAEINGMNNVEFSVGQAEKVMPKW 373
Query: 666 LKDYLNP 672
+ L+P
Sbjct: 374 KEQGLDP 380
>sp|Q837V0|Y728_ENTFA Uncharacterized RNA methyltransferase EF_0728 OS=Enterococcus
faecalis (strain ATCC 700802 / V583) GN=EF_0728 PE=3
SV=1
Length = 457
Score = 94.7 bits (234), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 99/417 (23%), Positives = 165/417 (39%), Gaps = 79/417 (18%)
Query: 261 ESAVPGELAEAHASSNGHEDGNGND-EGLAGDGSGLKVKS---ARDVVTPLAHMSYSVQL 316
E+A+PGE E G G G L + VK + ++PL H++Y QL
Sbjct: 37 ENALPGEKLEIKVLKTGKSFGYGKVLTVLKSSEQRVPVKDENFTKVGISPLQHLAYGAQL 96
Query: 317 EHKKNSIAQMLKKLTRNARKACPNGVSLPEWIMKSREIGGLPCKLEGILGSPLVNGYRNK 376
K + ++++ + K +E+ LP +G YRNK
Sbjct: 97 SFKTQQVENVMQR------------------VAKLQEVPVLPT-----IGMNDPWHYRNK 133
Query: 377 CEFSVGYSLQAKPTVGFMLGNFREGVTAVEEPVDCPNVSEIACKYASIFQEFLQQSDLPV 436
+ V + + GF N + + + P + K I +++ +
Sbjct: 134 AQIPVR-KIDNQLQTGFFRKNSHDLIPMEHFYIQDPEIDAAIVKIRDIMRKY----SVKP 188
Query: 437 WNRFKNSGFWRQLTVREGRSPGKPLDVENLEVNISEVNISEVMLIAQVSSATFDDAVVNS 496
+N N+G R + VR G G+ + V+LI + +V
Sbjct: 189 YNESDNTGNLRHIVVRRGYHTGEMM----------------VVLITRTPKLFPISKIVPD 232
Query: 497 EFERLAKAFAAGATASSPSLPLTALVIQD-HQGVSNVAPADAPLRLLSIPKADGEPEESN 555
E ++P ++Q+ + +NV D + L
Sbjct: 233 ILE---------------AIPEVVSIVQNVNPKRTNVIFGDETILLHG------------ 265
Query: 556 DVVEARIHDSISNLRFCISPTAFFQVNTLAAEKLYSLGGDWADLGPDTLLFDVCCGTGTI 615
+I D+I +L+F IS +F+QVN E +Y ++A L + ++ D CG GTI
Sbjct: 266 ---SEKITDTIFDLKFEISARSFYQVNPQQTEVMYQKVKEYAALTGNEIVVDAYCGIGTI 322
Query: 616 GLTLAHRVGMVIGIEMNASAVSDAHRNAEINGIKNCRFVCAKAEDVMGSLLKDYLNP 672
GLTLA V GIE+ AV DA NA++N I+N F AE+++ L+++ L P
Sbjct: 323 GLTLAQDAKQVYGIEVIEEAVKDAENNAKLNNIENATFTAGLAEELLPKLVENGLQP 379
>sp|Q5XBK8|Y1070_STRP6 Uncharacterized RNA methyltransferase M6_Spy1070 OS=Streptococcus
pyogenes serotype M6 (strain ATCC BAA-946 / MGAS10394)
GN=M6_Spy1070 PE=3 SV=1
Length = 462
Score = 94.7 bits (234), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 98/417 (23%), Positives = 163/417 (39%), Gaps = 79/417 (18%)
Query: 261 ESAVPGELAEAHASSNGHEDGNGNDEGLA----GDGSGLKVKSARDVVTPLAHMSYSVQL 316
++A+P E+ + G G E + + + R + L H++Y QL
Sbjct: 44 DNALPEEVIDMRVLKVNKNSGFGKVEAYHYLSPARNADVNLTYLRTGIADLGHLTYEDQL 103
Query: 317 EHKKNSIAQMLKKLTRNARKACPNGVSLPEWIMKSREIGGLPCKLEGILGSPLVNGYRNK 376
KK + L K+ G+S +E +G YRNK
Sbjct: 104 TFKKKQVQDSLYKIA---------GIS--------------DVTVESTIGMTEPLAYRNK 140
Query: 377 CEFSVGYSLQAKPTVGFMLGNFREGVTAVEEPVDCPNVSEIACKYASIFQEFLQQSDLPV 436
+ V + + GF + + + + + + + + ++ L++ D+
Sbjct: 141 AQVPVR-RVNGQLETGFFRKHSHDLIPISDYYIQDKEIDRLI----NFTRDLLRRFDIKP 195
Query: 437 WNRFKNSGFWRQLTVREGRSPGKPLDVENLEVNISEVNISEVMLIAQVSS-ATFDDAVVN 495
++ + +G R + VR G G E+ML+ + F V+
Sbjct: 196 YDETEQTGLLRNIVVRRGHYSG------------------EMMLVLVTTRPKVFR---VD 234
Query: 496 SEFERLAKAFAAGATASSPSLPLTALVIQDHQGVSNVAPADAPLRLLSIPKADGEPEESN 555
E++ +AF P +IQ N+ + +I D +
Sbjct: 235 QVIEKIVEAF-----------PAVVSIIQ------NINDKNTN----AIFGKDFKTLYGK 273
Query: 556 DVVEARIHDSISNLRFCISPTAFFQVNTLAAEKLYSLGGDWADLGPDTLLFDVCCGTGTI 615
D I DS+ + IS +F+QVNT+ AEKLY ++DL D ++ D G GTI
Sbjct: 274 DT----ITDSMLGNNYAISAQSFYQVNTVMAEKLYQTAIAFSDLSKDDIVIDAYSGIGTI 329
Query: 616 GLTLAHRVGMVIGIEMNASAVSDAHRNAEINGIKNCRFVCAKAEDVMGSLLKDYLNP 672
GL+ A V V G+E+ +AV DA NA +NGI N FV AE M + KD + P
Sbjct: 330 GLSFAKTVKAVYGVEVIEAAVRDAQHNAALNGITNAYFVADTAEHAMATWAKDGIKP 386
>sp|P0DG15|Y1024_STRPQ Uncharacterized RNA methyltransferase SPs0836 OS=Streptococcus
pyogenes serotype M3 (strain SSI-1) GN=SPs0836 PE=3 SV=1
Length = 462
Score = 94.7 bits (234), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 98/417 (23%), Positives = 163/417 (39%), Gaps = 79/417 (18%)
Query: 261 ESAVPGELAEAHASSNGHEDGNGNDEGLA----GDGSGLKVKSARDVVTPLAHMSYSVQL 316
++A+P E+ + G G E + + + R + L H++Y QL
Sbjct: 44 DNALPEEVIDMRVLKVNKNSGFGKVEAYHYLSPARNADVNLTYLRTGIADLGHLTYEDQL 103
Query: 317 EHKKNSIAQMLKKLTRNARKACPNGVSLPEWIMKSREIGGLPCKLEGILGSPLVNGYRNK 376
KK + L K+ G+S +E +G YRNK
Sbjct: 104 TFKKKQVQDSLYKIA---------GIS--------------DVTVESTIGMTEPLAYRNK 140
Query: 377 CEFSVGYSLQAKPTVGFMLGNFREGVTAVEEPVDCPNVSEIACKYASIFQEFLQQSDLPV 436
+ V + + GF + + + + + + + + ++ L++ D+
Sbjct: 141 AQVPVR-RVNGQLETGFFRKHSHDLIPISDYYIQDKEIDRLI----NFTRDLLRRFDIKP 195
Query: 437 WNRFKNSGFWRQLTVREGRSPGKPLDVENLEVNISEVNISEVMLIAQVSS-ATFDDAVVN 495
++ + +G R + VR G G E+ML+ + F V+
Sbjct: 196 YDETEQTGLLRNIVVRRGHYSG------------------EMMLVLVTTRPKVFR---VD 234
Query: 496 SEFERLAKAFAAGATASSPSLPLTALVIQDHQGVSNVAPADAPLRLLSIPKADGEPEESN 555
E++ +AF P +IQ N+ + +I D +
Sbjct: 235 QVIEKIVEAF-----------PAVVSIIQ------NINDKNTN----AIFGKDFKTLYGK 273
Query: 556 DVVEARIHDSISNLRFCISPTAFFQVNTLAAEKLYSLGGDWADLGPDTLLFDVCCGTGTI 615
D I DS+ + IS +F+QVNT+ AEKLY ++DL D ++ D G GTI
Sbjct: 274 DT----ITDSMLGNNYAISAQSFYQVNTVMAEKLYQTAIAFSDLSKDDIVIDAYSGIGTI 329
Query: 616 GLTLAHRVGMVIGIEMNASAVSDAHRNAEINGIKNCRFVCAKAEDVMGSLLKDYLNP 672
GL+ A V V G+E+ +AV DA NA +NGI N FV AE M + KD + P
Sbjct: 330 GLSFAKTVKAVYGVEVIEAAVRDAQHNAALNGITNAYFVADTAEHAMATWAKDGIKP 386
>sp|P0DG14|Y1024_STRP3 Uncharacterized RNA methyltransferase SpyM3_1024 OS=Streptococcus
pyogenes serotype M3 (strain ATCC BAA-595 / MGAS315)
GN=SpyM3_1024 PE=3 SV=1
Length = 462
Score = 94.7 bits (234), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 98/417 (23%), Positives = 163/417 (39%), Gaps = 79/417 (18%)
Query: 261 ESAVPGELAEAHASSNGHEDGNGNDEGLA----GDGSGLKVKSARDVVTPLAHMSYSVQL 316
++A+P E+ + G G E + + + R + L H++Y QL
Sbjct: 44 DNALPEEVIDMRVLKVNKNSGFGKVEAYHYLSPARNADVNLTYLRTGIADLGHLTYEDQL 103
Query: 317 EHKKNSIAQMLKKLTRNARKACPNGVSLPEWIMKSREIGGLPCKLEGILGSPLVNGYRNK 376
KK + L K+ G+S +E +G YRNK
Sbjct: 104 TFKKKQVQDSLYKIA---------GIS--------------DVTVESTIGMTEPLAYRNK 140
Query: 377 CEFSVGYSLQAKPTVGFMLGNFREGVTAVEEPVDCPNVSEIACKYASIFQEFLQQSDLPV 436
+ V + + GF + + + + + + + + ++ L++ D+
Sbjct: 141 AQVPVR-RVNGQLETGFFRKHSHDLIPISDYYIQDKEIDRLI----NFTRDLLRRFDIKP 195
Query: 437 WNRFKNSGFWRQLTVREGRSPGKPLDVENLEVNISEVNISEVMLIAQVSS-ATFDDAVVN 495
++ + +G R + VR G G E+ML+ + F V+
Sbjct: 196 YDETEQTGLLRNIVVRRGHYSG------------------EMMLVLVTTRPKVFR---VD 234
Query: 496 SEFERLAKAFAAGATASSPSLPLTALVIQDHQGVSNVAPADAPLRLLSIPKADGEPEESN 555
E++ +AF P +IQ N+ + +I D +
Sbjct: 235 QVIEKIVEAF-----------PAVVSIIQ------NINDKNTN----AIFGKDFKTLYGK 273
Query: 556 DVVEARIHDSISNLRFCISPTAFFQVNTLAAEKLYSLGGDWADLGPDTLLFDVCCGTGTI 615
D I DS+ + IS +F+QVNT+ AEKLY ++DL D ++ D G GTI
Sbjct: 274 DT----ITDSMLGNNYAISAQSFYQVNTVMAEKLYQTAIAFSDLSKDDIVIDAYSGIGTI 329
Query: 616 GLTLAHRVGMVIGIEMNASAVSDAHRNAEINGIKNCRFVCAKAEDVMGSLLKDYLNP 672
GL+ A V V G+E+ +AV DA NA +NGI N FV AE M + KD + P
Sbjct: 330 GLSFAKTVKAVYGVEVIEAAVRDAQHNAALNGITNAYFVADTAEHAMATWAKDGIKP 386
>sp|Q8P0H4|Y1360_STRP8 Uncharacterized RNA methyltransferase spyM18_1360 OS=Streptococcus
pyogenes serotype M18 (strain MGAS8232) GN=spyM18_1360
PE=3 SV=1
Length = 462
Score = 94.4 bits (233), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 97/416 (23%), Positives = 164/416 (39%), Gaps = 77/416 (18%)
Query: 261 ESAVPGELAEAHASSNGHEDGNGNDEGLA----GDGSGLKVKSARDVVTPLAHMSYSVQL 316
++A+P E+ + G G E + + + R + L H++Y QL
Sbjct: 44 DNALPEEVIDMRVLKVNKNSGFGKVEAYHYLSPARNADVNLTYLRTGIADLGHLTYEDQL 103
Query: 317 EHKKNSIAQMLKKLTRNARKACPNGVSLPEWIMKSREIGGLPCKLEGILGSPLVNGYRNK 376
KK + L K+ G+S +E +G YRNK
Sbjct: 104 TFKKKQVQDSLYKIA---------GIS--------------DVTVESTIGMTEPLAYRNK 140
Query: 377 CEFSVGYSLQAKPTVGFMLGNFREGVTAVEEPVDCPNVSEIACKYASIFQEFLQQSDLPV 436
+ V + + GF + + + + + + + + ++ L++ D+
Sbjct: 141 AQVPVR-RVNGQLETGFFRKHSHDLIPISDYYIQDKEIDRLI----NFTRDLLRRFDIKP 195
Query: 437 WNRFKNSGFWRQLTVREGRSPGKPLDVENLEVNISEVNISEVMLIAQVSSATFDDAVVNS 496
++ + +G R + VR G G+ + V+L+ D V+
Sbjct: 196 YDETEQTGLLRNIVVRRGHYSGEMM----------------VVLVTTRPKVFRVDQVI-- 237
Query: 497 EFERLAKAFAAGATASSPSLPLTALVIQDHQGVSNVAPADAPLRLLSIPKADGEPEESND 556
E++ +AF P +IQ N+ + +I D + D
Sbjct: 238 --EKIVEAF-----------PAVVSIIQ------NINDENTN----AIFGKDFKTLYGKD 274
Query: 557 VVEARIHDSISNLRFCISPTAFFQVNTLAAEKLYSLGGDWADLGPDTLLFDVCCGTGTIG 616
I DS+ + IS +F+QVNT+ AEKLY ++DL D ++ D G GTIG
Sbjct: 275 T----ITDSMLGNNYAISAQSFYQVNTVMAEKLYQTAIAFSDLSKDDIVIDAYSGIGTIG 330
Query: 617 LTLAHRVGMVIGIEMNASAVSDAHRNAEINGIKNCRFVCAKAEDVMGSLLKDYLNP 672
L+ A V V G+E+ +AV DA +NA +NGI N FV AE M + KD + P
Sbjct: 331 LSFAKTVKAVYGVEVIEAAVRDAQQNAALNGITNAYFVADTAEHAMATWAKDGIKP 386
>sp|Q830R6|Y2706_ENTFA Uncharacterized RNA methyltransferase EF_2706 OS=Enterococcus
faecalis (strain ATCC 700802 / V583) GN=EF_2706 PE=3
SV=1
Length = 456
Score = 94.4 bits (233), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 100/389 (25%), Positives = 159/389 (40%), Gaps = 87/389 (22%)
Query: 298 KSARDVVTP------------LAHMSYSVQLEHKKNSIAQMLKKLTRNARKACPNGVSLP 345
K+A+D V P L H++Y QL+ KK+ + Q L K + A L
Sbjct: 66 KAAKDRVVPPCPVYETCGGCQLQHLAYKAQLDFKKDLLKQALNKF----KPANYQNYEL- 120
Query: 346 EWIMKSREIGGLPCKLEGILGSPLVNGYRNKCEFSVGYSLQAKPTVGFMLGNFREGVTAV 405
+ IG + +P YRNK +F + + + G + + V
Sbjct: 121 -----RKTIG---------MDNPW--NYRNKAQFQLR-QIDGQVEAGLYQADSHQLV--- 160
Query: 406 EEPVD-CPNVSEIACKYASIFQEFLQQSDLPVWNRFKNSGFWRQLTVREGRSPGKPLDVE 464
P+D C K + + L LP+++ KNSG +R L VR G G
Sbjct: 161 --PIDNCLVQQPATTKVMNTLVDLLNDFQLPIYDERKNSGIFRTLMVRVGIQTG------ 212
Query: 465 NLEVNISEVNISEVMLIAQVSSATFDDAVVNSEFERLAKAFAAGATASSPSLPLTALVIQ 524
EV ++ S F + E++ +A + LP ++Q
Sbjct: 213 ------------EVQVVFITQSQKF------PQKEKMVRAI-------NEQLPEVVSIMQ 247
Query: 525 DHQGV-SNVAPADAPLRLLSIPKADGEPEESNDVVEARIHDSISNLRFCISPTAFFQVNT 583
+ Q +++ D L L +ES I + I+++ F +SP AFFQ+N
Sbjct: 248 NVQNKKTSLVMGDDTLHLWG--------KES-------IEEHINDVVFDLSPRAFFQLNP 292
Query: 584 LAAEKLYSLGGDWADLGPDTLLFDVCCGTGTIGLTLAHRVGMVIGIEMNASAVSDAHRNA 643
E LY+ G DL P+ + D CG GTIGL+LA + V G++ +A+ DA NA
Sbjct: 293 EQTEVLYNEGIKALDLQPNETVVDAYCGVGTIGLSLAKQAHQVRGMDTIPAAIDDARFNA 352
Query: 644 EINGIKNCRFVCAKAEDVMGSLLKDYLNP 672
+ G+ N + AED++ K+ P
Sbjct: 353 KRLGVTNTHYAVGTAEDLLPKWFKEGFKP 381
>sp|Q8XIK5|Y2114_CLOPE Uncharacterized RNA methyltransferase CPE2114 OS=Clostridium
perfringens (strain 13 / Type A) GN=CPE2114 PE=3 SV=1
Length = 451
Score = 92.8 bits (229), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 84/309 (27%), Positives = 138/309 (44%), Gaps = 57/309 (18%)
Query: 363 GILGSPLVNGYRNKCEFSVGYSLQA-KPTVGFMLGNFREGVTAVEEPV----DCPNVSEI 417
GI SP+ YRNK E++ G + + T+G + G+ V++ V D N+ +
Sbjct: 114 GIETSPIQWEYRNKMEYTFGDEEKGGELTLGMHMKGKSFGIVNVDKCVLVDEDFRNILDT 173
Query: 418 ACKYASIFQEFLQQSDLPVWNRFKNSGFWRQLTVREGRSPGKPLDVENLEVNISEVNISE 477
KY ++ LP + +G+ R L VR K + E + VN+
Sbjct: 174 TVKY-------FREKGLPFYKIMPRTGYLRYLVVR------KSVKTEEILVNL------- 213
Query: 478 VMLIAQVSSATFDDAVVNSEFERLAKAFAAGATASSPSLPLTALVIQDHQGVSNVAPADA 537
V++ D + +EF L K L +++ + +S
Sbjct: 214 ------VTTTQIDFDL--TEFTELIKGLNLKG-------KLKSIIHTESDALSEAVI--- 255
Query: 538 PLRLLSIPKADGEPEESNDVV-EARIHDSISNLRFCISPTAFFQVNTLAAEKLYSLGGDW 596
PE+ N + + I +++ L F ISP +FFQ N+L AEKLYS+ D+
Sbjct: 256 -------------PEKVNILYGDDFITENLLGLNFKISPFSFFQTNSLGAEKLYSIVRDF 302
Query: 597 ADLGPDTLLFDVCCGTGTIGLTLAHRVGMVIGIEMNASAVSDAHRNAEINGIKNCRFVCA 656
+ ++FD+ CGTGTIG A + VIGIE+ A A+ NA++NG+ NC F+
Sbjct: 303 MGAADNKVVFDLYCGTGTIGQIAAGKASKVIGIELIEEAAMAANENAKLNGLNNCNFIAG 362
Query: 657 KAEDVMGSL 665
+V+ ++
Sbjct: 363 DVAEVIKTV 371
>sp|Q8DPY7|Y932_STRR6 Uncharacterized RNA methyltransferase spr0932 OS=Streptococcus
pneumoniae (strain ATCC BAA-255 / R6) GN=spr0932 PE=3
SV=1
Length = 543
Score = 92.8 bits (229), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 47/111 (42%), Positives = 67/111 (60%)
Query: 562 IHDSISNLRFCISPTAFFQVNTLAAEKLYSLGGDWADLGPDTLLFDVCCGTGTIGLTLAH 621
I D + F I+ AF+QVNT AEKLY D+A+L D ++ D G GTIGL++A
Sbjct: 265 ITDQMLGNDFQIAGLAFYQVNTEMAEKLYQTAIDFAELKKDDVVIDAYSGIGTIGLSVAK 324
Query: 622 RVGMVIGIEMNASAVSDAHRNAEINGIKNCRFVCAKAEDVMGSLLKDYLNP 672
V V G+E+ AV ++ +NA++N I N +VC AE+ M + LKD + P
Sbjct: 325 HVKEVYGVELIPEAVENSKKNAQLNNISNAHYVCDTAENAMKNWLKDGIQP 375
>sp|Q892Z2|Y1941_CLOTE Uncharacterized RNA methyltransferase CTC_01941 OS=Clostridium
tetani (strain Massachusetts / E88) GN=CTC_01941 PE=3
SV=1
Length = 456
Score = 92.4 bits (228), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 84/356 (23%), Positives = 140/356 (39%), Gaps = 75/356 (21%)
Query: 310 MSYSVQLEHKKNSIAQMLKKLTRNARKACPNGVSLPEWIMKSREIGGLPCKLEGILGSPL 369
+ Y QLE K++ I ++ KK + P I GSP
Sbjct: 87 IPYEKQLEIKQHEILELFKKANLDGFDFLP------------------------IEGSPK 122
Query: 370 VNGYRNKCEFSVG-YSLQAKPTVGFMLGNFREGVTAVEEPVDCPNVSEIACKYASIFQEF 428
YRNK EF+ G + +G G+ + +E C V E + +
Sbjct: 123 QYEYRNKMEFTFGDLKKGGELNLGMHAKGMSFGIISADE---CKIVDEDYRNILNATLNY 179
Query: 429 LQQSDLPVWNRFKNSGFWRQLTVREGRSPGKPLDVENLEVNISEVNISEVMLIAQVSSAT 488
++ LP + G+ R L +R+ + G+ +L+ V+++
Sbjct: 180 FREKQLPHYRIMAREGYLRNLVIRKAENTGE-------------------VLVNLVTTSQ 220
Query: 489 FDDAVVNSEFERLAKAFAAGATASSPSLPLTALVIQDHQGVSNVAPADAPLRLLSIPKAD 548
D + E+ + K+ L ++ + +S+V D
Sbjct: 221 IDFNL--DEYTEIIKSINYKGN-------LVGILHTINDSLSDVVQCDKL---------- 261
Query: 549 GEPEESNDVVEAR--IHDSISNLRFCISPTAFFQVNTLAAEKLYSLGGDWADLGPDTLLF 606
+++ R I + + L+F I+P +FFQ N+ AEKLYS+ D+ +F
Sbjct: 262 -------NILYGRDYIIEDLLGLKFKITPLSFFQTNSKGAEKLYSIVRDFIGESKSKTVF 314
Query: 607 DVCCGTGTIGLTLAHRVGMVIGIEMNASAVSDAHRNAEINGIKNCRFVCAKAEDVM 662
D+ CGTGTIG +A VIGIE+ AV A NA++N + NC F+ V+
Sbjct: 315 DLYCGTGTIGQIVAPEAKKVIGIELIEEAVESARENAKLNNLNNCEFIAGDIAQVI 370
>sp|Q8Y6D6|Y1751_LISMO Uncharacterized RNA methyltransferase lmo1751 OS=Listeria
monocytogenes serovar 1/2a (strain ATCC BAA-679 / EGD-e)
GN=lmo1751 PE=3 SV=1
Length = 453
Score = 92.0 bits (227), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 91/361 (25%), Positives = 144/361 (39%), Gaps = 75/361 (20%)
Query: 307 LAHMSYSVQLEHKKNSIAQMLKKLTRNARKACPNGVSLPEWIMKSREIGGLPCKLEGILG 366
L H+SY QLE K+N + + +K+ IG L ++ LG
Sbjct: 87 LQHLSYDGQLEFKRNQVEETMKR------------------------IGKLNVEVPETLG 122
Query: 367 SPLVNGYRNKCEFSVGYSLQAKPTVGFMLGNFREGVTAVEEPVDCPNVSEIACKYASIFQ 426
YRNK + VG+ + K T GF +++ A+ + C +E +
Sbjct: 123 MENPWRYRNKSQVPVGF-VNGKLTAGF----YQKRSHAIIDMSTCLIHNEQGDFAVQKTR 177
Query: 427 EFLQQSDLPVWNRFKNSGFWRQLTVREGRSPGKPLDVENLEVNISEVNISEVMLIAQVSS 486
E L + ++ G R + R + G+ + ++L+
Sbjct: 178 EILAKYGTEPYDEQTGKGDIRHIMTRFAHTTGQLM----------------IVLVTTKER 221
Query: 487 ATFDDAVVNSEFERLAKAFAAGATASSPSLPLTALVIQDHQGVSNVAPADAPLRLLSIPK 546
F + +V E+L LT++V + +NV D L
Sbjct: 222 MPFKEEIVRDLVEQLE---------------LTSIVQNINPHKTNVIFGDRTKTLWG--- 263
Query: 547 ADGEPEESNDVVEARIHDSISNLRFCISPTAFFQVNTLAAEKLYSLGGDWADLGPDTLLF 606
D++E D+I +RF IS +F+QVN L E LY D A+L + +
Sbjct: 264 --------KDIIE----DTIHGIRFAISARSFYQVNPLQTEVLYQQAIDAAELTGEETVI 311
Query: 607 DVCCGTGTIGLTLAHRVGMVIGIEMNASAVSDAHRNAEINGIKNCRFVCAKAEDVMGSLL 666
D CG G+I L LA + V G+E+ A+ DA NAE+N + N F KAE+V+ S
Sbjct: 312 DAYCGIGSISLCLAKKAKHVYGVEIVDQAIQDARANAELNELANTTFETGKAEEVIPSWY 371
Query: 667 K 667
K
Sbjct: 372 K 372
>sp|Q7NGN4|Y3134_GLOVI Uncharacterized RNA methyltransferase gll3134 OS=Gloeobacter
violaceus (strain PCC 7421) GN=gll3134 PE=3 SV=1
Length = 457
Score = 91.7 bits (226), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 91/365 (24%), Positives = 139/365 (38%), Gaps = 80/365 (21%)
Query: 310 MSYSVQLEHKKNSIAQMLKKLTRNARKACPNGVSLPEWIMKSREIGGLPCKLEGILGSPL 369
+ Y QLE K+ + + L+ L G + P +E ++ P
Sbjct: 96 IDYPFQLEAKQRQVREALEHL---------GGFAEP--------------PVEPVIAQPR 132
Query: 370 VNGYRNKCEFSVGYSLQAKPTVGFMLGNFREGVTAVEEPVD-CPNVSEIACKYASIFQEF 428
GYRNK F +G + +P +G+ + V P+D CP + +E
Sbjct: 133 PFGYRNKSTFPIGRDARGEPVIGYYQKDSHRIV-----PLDACPVQDSRLDPLLAAAREL 187
Query: 429 LQQSDLPVWNRFKNSGFWRQLTVREGRSPGKPLDVENLEVNISEVNISEVMLIAQVSSAT 488
++ +++ + G R L +R G G+ L L ++ +S + AQ
Sbjct: 188 IRTQGWSIYDEKHHRGALRHLGLRIGERTGQRL----LTFVVNGQTLSGIKPAAQALMDR 243
Query: 489 FDDAV---VNSEFERLAKAFAAGATASSPSLPLTALVIQDHQGVSNVAPADAPLRLLSIP 545
F D V +N+ ER G T P A
Sbjct: 244 FADLVGVCLNTHTER-------GNTIFGPQTRCLA------------------------- 271
Query: 546 KADGEPEESNDVVEARIHDSISNLRFCISPTAFFQVNTLAAEKLYSLGGDWADLGPDTLL 605
D +E + + RF I PT FFQ+ T AE L L AD + +
Sbjct: 272 --------GQDFIE----EVLDGFRFRIEPTTFFQICTSQAEILARLVARGADATAEQTV 319
Query: 606 FDVCCGTGTIGLTLAHRVGMVIGIEMNASAVSDAHRNAEINGIKNCRFVCAKAEDVMGSL 665
D CG GT+ L LA V+GIE + +V A +NA INGI+NCRF+ E ++ L
Sbjct: 320 VDAYCGIGTLSLPLARAARAVVGIESHVRSVEQARQNARINGIENCRFLAGTVEALLPDL 379
Query: 666 LKDYL 670
D +
Sbjct: 380 RADIV 384
>sp|Q8CRU6|Y1582_STAES Uncharacterized RNA methyltransferase SE_1582 OS=Staphylococcus
epidermidis (strain ATCC 12228) GN=SE_1582 PE=3 SV=2
Length = 456
Score = 91.3 bits (225), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 90/360 (25%), Positives = 146/360 (40%), Gaps = 80/360 (22%)
Query: 307 LAHMSYSVQLEHKKNSIAQMLKKLTRNARKACPNGVSLPEWIMKSREIGGLPCKLEGILG 366
L HM+Y QL+ K+ + + RK + E I
Sbjct: 85 LQHMTYRAQLDMKREQVVNLFH------RKGPFENTVIKETI------------------ 120
Query: 367 SPLVN--GYRNKCEFSVGYSLQAKPTVGFMLGNFREGVTAVEEPVDCPNVSEIACKYASI 424
+VN YRNK + VG S + +GF +R+ + + C + +
Sbjct: 121 -GMVNPWRYRNKSQIPVGQSNSNQVIMGF----YRQRSHDIIDMDSCLIQDRQHQEVMNR 175
Query: 425 FQEFLQQSDLPVWNRFKNSGFWRQLTVREGRSPGKPLDVENLEVNISEVNISEVMLIAQV 484
+ +L + ++ ++N +G R L VR G + E+M+I
Sbjct: 176 VKYWLNELNISIYNEKTKTGLIRHLVVRTG------------------YHTDEMMVIFVT 217
Query: 485 SSATFDDA--VVNSEFERLAKAFAAGATASSPSLPLTALVIQDHQGVSNVAPADAPLRLL 542
+ ATF + +VN +L K F P++ T++ + SNV + L
Sbjct: 218 NGATFKQSELLVN----KLKKEF--------PNI--TSIKQNINNSHSNVIMGRQSMTLY 263
Query: 543 SIPKADGEPEESNDVVEARIHDSISNLRFCISPTAFFQVNTLAAEKLYSLGGDWADLGPD 602
+ +I D +S + + IS +F+Q+N+ EKLY ++A L
Sbjct: 264 G---------------KDKIEDQLSEVTYHISDLSFYQINSSQTEKLYQQALNYAQLTGK 308
Query: 603 TLLFDVCCGTGTIGLTLAHRVGMVIGIEMNASAVSDAHRNAEINGIKNCRFVCAKAEDVM 662
++ D CG GTIGL +A V G+E+ A+ DA NA N +KN F C KAEDV+
Sbjct: 309 EIVLDTYCGIGTIGLYMAPLAKHVYGVEVVPQAIKDAEDNATKNQLKNTTFECGKAEDVI 368
>sp|Q5HN37|Y1435_STAEQ Uncharacterized RNA methyltransferase SERP1435 OS=Staphylococcus
epidermidis (strain ATCC 35984 / RP62A) GN=SERP1435 PE=3
SV=1
Length = 456
Score = 91.3 bits (225), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 90/360 (25%), Positives = 146/360 (40%), Gaps = 80/360 (22%)
Query: 307 LAHMSYSVQLEHKKNSIAQMLKKLTRNARKACPNGVSLPEWIMKSREIGGLPCKLEGILG 366
L HM+Y QL+ K+ + + RK + E I
Sbjct: 85 LQHMTYRAQLDMKREQVVNLFH------RKGPFENTVIKETI------------------ 120
Query: 367 SPLVN--GYRNKCEFSVGYSLQAKPTVGFMLGNFREGVTAVEEPVDCPNVSEIACKYASI 424
+VN YRNK + VG S + +GF +R+ + + C + +
Sbjct: 121 -GMVNPWRYRNKSQIPVGQSNSNQVIMGF----YRQRSHDIIDMDSCLIQDRQHQEVMNR 175
Query: 425 FQEFLQQSDLPVWNRFKNSGFWRQLTVREGRSPGKPLDVENLEVNISEVNISEVMLIAQV 484
+ +L + ++ ++N +G R L VR G + E+M+I
Sbjct: 176 VKYWLNELNISIYNEKTKTGLIRHLVVRTG------------------YHTDEMMVIFVT 217
Query: 485 SSATFDDA--VVNSEFERLAKAFAAGATASSPSLPLTALVIQDHQGVSNVAPADAPLRLL 542
+ ATF + +VN +L K F P++ T++ + SNV + L
Sbjct: 218 NGATFKQSELLVN----KLKKEF--------PNI--TSIKQNINNSHSNVIMGRQSMTLY 263
Query: 543 SIPKADGEPEESNDVVEARIHDSISNLRFCISPTAFFQVNTLAAEKLYSLGGDWADLGPD 602
+ +I D +S + + IS +F+Q+N+ EKLY ++A L
Sbjct: 264 G---------------KDKIEDQLSEVTYHISDLSFYQINSSQTEKLYQQALNYAQLTGK 308
Query: 603 TLLFDVCCGTGTIGLTLAHRVGMVIGIEMNASAVSDAHRNAEINGIKNCRFVCAKAEDVM 662
++ D CG GTIGL +A V G+E+ A+ DA NA N +KN F C KAEDV+
Sbjct: 309 EIVLDTYCGIGTIGLYMAPLAKHVYGVEVVPQAIKDAEDNATKNQLKNTTFECGKAEDVI 368
>sp|Q8Y6I1|Y1703_LISMO Uncharacterized RNA methyltransferase lmo1703 OS=Listeria
monocytogenes serovar 1/2a (strain ATCC BAA-679 / EGD-e)
GN=lmo1703 PE=3 SV=1
Length = 459
Score = 90.9 bits (224), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 94/368 (25%), Positives = 146/368 (39%), Gaps = 74/368 (20%)
Query: 307 LAHMSYSVQLEHKKNSIAQMLKKLTRNARKACPNGVSLPEWIMKSREIGGLPCKLEGILG 366
L H++YS QLE K++ + Q ++K T+ I K+ +G
Sbjct: 87 LQHVAYSAQLELKRDIVIQSIEKHTK---------------------IDPTKLKIRPTIG 125
Query: 367 SPLVNGYRNKCEFSVGYSLQAKPTVGFMLGNFREGVTAVEEPV-DCPNVSEIACKYASIF 425
YRNK +F + G N + V P+ DC + K +
Sbjct: 126 MEDPWRYRNKSQFQTRMVGSGQVETGLFGANSHQLV-----PIEDCIVQQPVTIKVTNFV 180
Query: 426 QEFLQQSDLPVWNRFKNSGFWRQLTVREGRSPGKPLDVENLEVNISEVNISEVMLIAQVS 485
++ L++ +P+++ SG R + VR G V E L+ +
Sbjct: 181 RDLLEKYGVPIYDEKAGSGIVRTIVVRTG------------------VKTGETQLVFITN 222
Query: 486 SATFDDAVVNSEFERLAKAFAAGATASSPSLPLTALVIQD-HQGVSNVAPADAPLRLLSI 544
S + E LA+ AA LP ++Q+ +Q S++ D L
Sbjct: 223 SKKLP-----KKREMLAEIEAA--------LPEVTSIMQNVNQAKSSLIFGDETFLLAG- 268
Query: 545 PKADGEPEESNDVVEARIHDSISNLRFCISPTAFFQVNTLAAEKLYSLGGDWADLGPDTL 604
+ES I + + L F +S AFFQ+N E+LY L
Sbjct: 269 -------KES-------IEEKLMELEFDLSARAFFQLNPFQTERLYQEVEKALVLTGSET 314
Query: 605 LFDVCCGTGTIGLTLAHRVGMVIGIEMNASAVSDAHRNAEINGIKNCRFVCAKAEDVMGS 664
L D CG GTIG A +V V G+++ ++ DA RNAE NGI+N + KAEDV+
Sbjct: 315 LVDAYCGVGTIGQAFAGKVKEVRGMDIIPESIEDAKRNAEKNGIENVYYEVGKAEDVLPK 374
Query: 665 LLKDYLNP 672
+K+ P
Sbjct: 375 WVKEGFRP 382
>sp|Q8KGF9|Y009_CHLTE Uncharacterized RNA methyltransferase CT0009 OS=Chlorobium tepidum
(strain ATCC 49652 / DSM 12025 / TLS) GN=CT0009 PE=3
SV=1
Length = 483
Score = 90.1 bits (222), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 104/382 (27%), Positives = 153/382 (40%), Gaps = 90/382 (23%)
Query: 309 HMSYSVQLEHKKNSIAQMLKKLTRNARKACPNGVSLPEWIMKSREIGGLPC-KLEGILGS 367
H+SY QL +K + L+ IGG + +L +
Sbjct: 97 HVSYEAQLRYKHKKVTDSLE------------------------HIGGFESPDVRPVLAA 132
Query: 368 PLVNGYRNKCEFS---VGYSLQ--------AKP---TVGFML-GNFREGVTAVEEPVDCP 412
P YRNK EFS + Y LQ AKP +GF GNF + V + C
Sbjct: 133 PDALHYRNKVEFSCSNMRYLLQSEIDSDQLAKPKTFALGFHAPGNFEK----VLDLDTCY 188
Query: 413 NVSEIACKYASIFQEFLQQSDLPVWNRFKNSGFWRQLTVREGRSPGKPLDVENLEVNISE 472
E + ++ ++F + L + + G+ R L +R E L VNI
Sbjct: 189 LAKECMNRVLNVLRDFAIERGLEPYAAKAHEGYLRNLMLRYSERH------EQLMVNIV- 241
Query: 473 VNISEVMLIAQVSSATFDDAVVNSEFERLAKAFAAGATASSPSLPLTALVIQDHQGVSNV 532
++ +D A++ + ERL A+ P +T L +NV
Sbjct: 242 -------------TSWYDKALMQALKERLE--------AAMPEQQMTLL--------NNV 272
Query: 533 APADAPLRLLSIPKADGEPEESNDVVEARIHDSISNLRFCISPTAFFQVNTLAAEKLYSL 592
R ++ + E S D + + + +L F IS +FFQ NT AE LY
Sbjct: 273 TT-----RKNTVATGEQEYVISGD---GYVTERLGDLDFRISANSFFQTNTRQAETLYDQ 324
Query: 593 GGDWADLGPDTLLFDVCCGTGTIGLTLAHRVGMVIGIEMNASAVSDAHRNAEINGIKNCR 652
+ P+ ++D+ CGTGTI L LA IGIE+ SAV DA NAE+NG+ N
Sbjct: 325 IIAVGGITPEDTVYDLYCGTGTITLYLARHCKQAIGIEVVESAVKDAEMNAELNGLSNTV 384
Query: 653 FVCAKAEDV--MGSLLKDYLNP 672
F A ++ M L+ Y P
Sbjct: 385 FFQADLKNFHAMQEALEPYAKP 406
>sp|Q71YR7|Y1776_LISMF Uncharacterized RNA methyltransferase LMOf2365_1776 OS=Listeria
monocytogenes serotype 4b (strain F2365)
GN=LMOf2365_1776 PE=3 SV=1
Length = 453
Score = 89.7 bits (221), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 89/361 (24%), Positives = 144/361 (39%), Gaps = 75/361 (20%)
Query: 307 LAHMSYSVQLEHKKNSIAQMLKKLTRNARKACPNGVSLPEWIMKSREIGGLPCKLEGILG 366
L H+SY QLE K+N + + +K+ IG L ++ LG
Sbjct: 87 LQHLSYDGQLEFKRNQVEETMKR------------------------IGKLNVEVPETLG 122
Query: 367 SPLVNGYRNKCEFSVGYSLQAKPTVGFMLGNFREGVTAVEEPVDCPNVSEIACKYASIFQ 426
YRNK + VG+ + K T GF +++ A+ + C +E +
Sbjct: 123 MENPWRYRNKSQVPVGF-VNGKLTAGF----YQKRSHAIIDMSTCLIHNEQGDFAVQKTR 177
Query: 427 EFLQQSDLPVWNRFKNSGFWRQLTVREGRSPGKPLDVENLEVNISEVNISEVMLIAQVSS 486
E L + ++ G R + R + G+ + ++L+
Sbjct: 178 EILAKYGTEPYDEQTGKGDIRHIMTRFAHTTGQLM----------------IVLVTTKER 221
Query: 487 ATFDDAVVNSEFERLAKAFAAGATASSPSLPLTALVIQDHQGVSNVAPADAPLRLLSIPK 546
F + +V E+L LT++V + +NV D L
Sbjct: 222 MPFKEEIVRELVEQLE---------------LTSIVQNINPHKTNVIFGDRTKTLWG--- 263
Query: 547 ADGEPEESNDVVEARIHDSISNLRFCISPTAFFQVNTLAAEKLYSLGGDWADLGPDTLLF 606
D++E D+I +RF IS +F+QVN + E LY D A+L + +
Sbjct: 264 --------KDIIE----DTIHGIRFAISARSFYQVNPIQTEVLYQQAIDAAELTGEETVI 311
Query: 607 DVCCGTGTIGLTLAHRVGMVIGIEMNASAVSDAHRNAEINGIKNCRFVCAKAEDVMGSLL 666
D CG G+I L LA + V G+E+ A+ DA NAE+N + N F KAE+V+ +
Sbjct: 312 DAYCGIGSISLCLAKKAKHVYGVEIVDQAIQDARANAELNELANTTFETGKAEEVIPAWY 371
Query: 667 K 667
K
Sbjct: 372 K 372
>sp|Q97R12|Y1029_STRPN Uncharacterized RNA methyltransferase SP_1029 OS=Streptococcus
pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)
GN=SP_1029 PE=3 SV=1
Length = 543
Score = 89.7 bits (221), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 46/111 (41%), Positives = 65/111 (58%)
Query: 562 IHDSISNLRFCISPTAFFQVNTLAAEKLYSLGGDWADLGPDTLLFDVCCGTGTIGLTLAH 621
I D + F I+ AF+QVNT AEKLY D+A+L D ++ D G GTIGL++A
Sbjct: 265 ITDQMLGNDFQIAGPAFYQVNTEMAEKLYQTAIDFAELKKDDVIIDAYSGIGTIGLSVAK 324
Query: 622 RVGMVIGIEMNASAVSDAHRNAEINGIKNCRFVCAKAEDVMGSLLKDYLNP 672
V V G+E+ AV ++ +NA +N I N +VC AE+ M LK+ + P
Sbjct: 325 HVKEVYGVELIPEAVENSQKNASLNKITNAHYVCDTAENAMKKWLKEGIQP 375
>sp|Q8NVT4|Y1838_STAAW Uncharacterized RNA methyltransferase MW1838 OS=Staphylococcus
aureus (strain MW2) GN=MW1838 PE=3 SV=1
Length = 453
Score = 89.7 bits (221), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 88/356 (24%), Positives = 142/356 (39%), Gaps = 72/356 (20%)
Query: 307 LAHMSYSVQLEHKKNSIAQMLKKLTRNARKACPNGVSLPEWIMKSREIGGLPCKLEGILG 366
L H+SY QLE KK + + + RKA + K+ +G
Sbjct: 85 LQHLSYEAQLEMKKEQVINLFQ------RKAHFDN-----------------SKINDTVG 121
Query: 367 SPLVNGYRNKCEFSVGYSLQAKPTVGFMLGNFREGVTAVEEPVDCPNVSEIACKYASIFQ 426
YRNK + VG + Q + +GF + + + E+ + SI +
Sbjct: 122 MTDPWRYRNKSQIPVGKNEQNEVIMGFYRQRSHDIIDMESCLIQDSQHQEVMNEVKSILK 181
Query: 427 EFLQQSDLPVWNRFKNSGFWRQLTVREGRSPGKPLDVENLEVNISEVNISEVMLIAQVSS 486
+ ++ ++ G R L VR G + E+M+I +
Sbjct: 182 DL----NVSIYQEQLKKGLMRHLVVRTGY------------------HTDEMMIIFVTNG 219
Query: 487 ATFDDAVVNSEFERLAKAFAAGATASSPSLPLTALVIQDHQGVSNVAPADAPLRLLSIPK 546
+ N+ E++ AF P++ I D SNV + L
Sbjct: 220 KKWPQK--NAVVEKILDAF--------PNVTSIKQNINDSH--SNVIMGRQSITLYG--- 264
Query: 547 ADGEPEESNDVVEARIHDSISNLRFCISPTAFFQVNTLAAEKLYSLGGDWADLGPDTLLF 606
+ I D +++ F IS +F+Q+N+ EKLY+ ++A L + ++
Sbjct: 265 ------------KDTIIDQLTDSTFKISDQSFYQINSEQTEKLYNKAIEYAQLTGNEVVL 312
Query: 607 DVCCGTGTIGLTLAHRVGMVIGIEMNASAVSDAHRNAEINGIKNCRFVCAKAEDVM 662
D CG GTIGL +A V G+E+ SA+ DA +NA IN N FVC KAE+V+
Sbjct: 313 DTYCGIGTIGLYMAPHAKHVYGVEVVPSAIEDAQQNATINQCNNTTFVCGKAEEVI 368
>sp|Q6G836|Y1819_STAAS Uncharacterized RNA methyltransferase SAS1819 OS=Staphylococcus
aureus (strain MSSA476) GN=SAS1819 PE=3 SV=1
Length = 453
Score = 89.7 bits (221), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 88/356 (24%), Positives = 142/356 (39%), Gaps = 72/356 (20%)
Query: 307 LAHMSYSVQLEHKKNSIAQMLKKLTRNARKACPNGVSLPEWIMKSREIGGLPCKLEGILG 366
L H+SY QLE KK + + + RKA + K+ +G
Sbjct: 85 LQHLSYEAQLEMKKEQVINLFQ------RKAHFDN-----------------SKINDTVG 121
Query: 367 SPLVNGYRNKCEFSVGYSLQAKPTVGFMLGNFREGVTAVEEPVDCPNVSEIACKYASIFQ 426
YRNK + VG + Q + +GF + + + E+ + SI +
Sbjct: 122 MTDPWRYRNKSQIPVGKNEQNEVIMGFYRQRSHDIIDMESCLIQDSQHQEVMNEVKSILK 181
Query: 427 EFLQQSDLPVWNRFKNSGFWRQLTVREGRSPGKPLDVENLEVNISEVNISEVMLIAQVSS 486
+ ++ ++ G R L VR G + E+M+I +
Sbjct: 182 DL----NVSIYQEQLKKGLMRHLVVRTGY------------------HTDEMMIIFVTNG 219
Query: 487 ATFDDAVVNSEFERLAKAFAAGATASSPSLPLTALVIQDHQGVSNVAPADAPLRLLSIPK 546
+ N+ E++ AF P++ I D SNV + L
Sbjct: 220 KKWPQK--NAVVEKILDAF--------PNVTSIKQNINDSH--SNVIMGRQSITLYG--- 264
Query: 547 ADGEPEESNDVVEARIHDSISNLRFCISPTAFFQVNTLAAEKLYSLGGDWADLGPDTLLF 606
+ I D +++ F IS +F+Q+N+ EKLY+ ++A L + ++
Sbjct: 265 ------------KDTIIDQLTDSTFKISDQSFYQINSEQTEKLYNKAIEYAQLTGNEVVL 312
Query: 607 DVCCGTGTIGLTLAHRVGMVIGIEMNASAVSDAHRNAEINGIKNCRFVCAKAEDVM 662
D CG GTIGL +A V G+E+ SA+ DA +NA IN N FVC KAE+V+
Sbjct: 313 DTYCGIGTIGLYMAPHAKHVYGVEVVPSAIEDAQQNATINQCNNTTFVCGKAEEVI 368
>sp|Q6GFG0|Y1988_STAAR Uncharacterized RNA methyltransferase SAR1988 OS=Staphylococcus
aureus (strain MRSA252) GN=SAR1988 PE=3 SV=1
Length = 453
Score = 89.4 bits (220), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 88/356 (24%), Positives = 142/356 (39%), Gaps = 72/356 (20%)
Query: 307 LAHMSYSVQLEHKKNSIAQMLKKLTRNARKACPNGVSLPEWIMKSREIGGLPCKLEGILG 366
L H+SY QLE KK + + + RKA + K+ +G
Sbjct: 85 LQHLSYEAQLEMKKEQVINLFQ------RKAHFDN-----------------SKINDTVG 121
Query: 367 SPLVNGYRNKCEFSVGYSLQAKPTVGFMLGNFREGVTAVEEPVDCPNVSEIACKYASIFQ 426
YRNK + VG + Q + +GF + + + E+ + SI +
Sbjct: 122 MTDPWRYRNKSQIPVGKNEQNEVIMGFYRQRSHDIIDMGSCLIQDSQHQEVMNEVKSILK 181
Query: 427 EFLQQSDLPVWNRFKNSGFWRQLTVREGRSPGKPLDVENLEVNISEVNISEVMLIAQVSS 486
+ ++ ++ G R L VR G + E+M+I +
Sbjct: 182 DL----NVSIYQEQLKKGLMRHLVVRTGY------------------HTDEMMVIFVTNG 219
Query: 487 ATFDDAVVNSEFERLAKAFAAGATASSPSLPLTALVIQDHQGVSNVAPADAPLRLLSIPK 546
+ N+ E++ AF P++ I D SNV + L
Sbjct: 220 KNWPQK--NAVVEKILDAF--------PNVTSIKQNINDSH--SNVIMGRQSITLYG--- 264
Query: 547 ADGEPEESNDVVEARIHDSISNLRFCISPTAFFQVNTLAAEKLYSLGGDWADLGPDTLLF 606
+ I D +++ F IS +F+Q+N+ EKLY+ ++A L + ++
Sbjct: 265 ------------KDTIIDQLTDSTFKISDQSFYQINSEQTEKLYNKAIEYAQLTGNEVVL 312
Query: 607 DVCCGTGTIGLTLAHRVGMVIGIEMNASAVSDAHRNAEINGIKNCRFVCAKAEDVM 662
D CG GTIGL +A V G+E+ SA+ DA +NA IN N FVC KAE+V+
Sbjct: 313 DTYCGIGTIGLYMAPHAKHVYGVEVVPSAIEDAQQNATINQCNNTTFVCGKAEEVI 368
>sp|Q5HEM5|Y1957_STAAC Uncharacterized RNA methyltransferase SACOL1957 OS=Staphylococcus
aureus (strain COL) GN=SACOL1957 PE=3 SV=1
Length = 453
Score = 88.6 bits (218), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 88/356 (24%), Positives = 142/356 (39%), Gaps = 72/356 (20%)
Query: 307 LAHMSYSVQLEHKKNSIAQMLKKLTRNARKACPNGVSLPEWIMKSREIGGLPCKLEGILG 366
L H+SY QLE KK + + + RKA + K+ +G
Sbjct: 85 LQHLSYEAQLEMKKEQVINLFQ------RKAHFDN-----------------SKINDTVG 121
Query: 367 SPLVNGYRNKCEFSVGYSLQAKPTVGFMLGNFREGVTAVEEPVDCPNVSEIACKYASIFQ 426
YRNK + VG + Q + +GF + + + E+ + SI +
Sbjct: 122 MTDPWRYRNKSQIPVGKNEQNEVIMGFYRQRSHDIIDMESCLIQDSQHQEVMNEVKSILK 181
Query: 427 EFLQQSDLPVWNRFKNSGFWRQLTVREGRSPGKPLDVENLEVNISEVNISEVMLIAQVSS 486
+ ++ ++ G R L VR G + E+M+I +
Sbjct: 182 DL----NVSIYQEQLKKGLMRHLVVRTGY------------------HTDEMMIIFVTNG 219
Query: 487 ATFDDAVVNSEFERLAKAFAAGATASSPSLPLTALVIQDHQGVSNVAPADAPLRLLSIPK 546
+ N+ E++ AF P++ I D SNV + L
Sbjct: 220 KKWPQK--NAVVEKILDAF--------PNVTSIKQNINDSH--SNVIMGRQSITLYG--- 264
Query: 547 ADGEPEESNDVVEARIHDSISNLRFCISPTAFFQVNTLAAEKLYSLGGDWADLGPDTLLF 606
+ I D +++ F IS +F+Q+N+ EKLY+ ++A L + ++
Sbjct: 265 ------------KDTIIDQLTDSTFKISDQSFYQINSEQTEKLYNKAIEYAQLTGNEVVL 312
Query: 607 DVCCGTGTIGLTLAHRVGMVIGIEMNASAVSDAHRNAEINGIKNCRFVCAKAEDVM 662
D CG GTIGL +A V G+E+ SA+ DA +NA IN N FVC KAE+V+
Sbjct: 313 DTYCGIGTIGLYMAPLAKHVYGVEVVPSAIEDAQQNATINQCNNTTFVCGKAEEVI 368
>sp|Q71YW4|Y1727_LISMF Uncharacterized RNA methyltransferase LMOf2365_1727 OS=Listeria
monocytogenes serotype 4b (strain F2365)
GN=LMOf2365_1727 PE=3 SV=1
Length = 459
Score = 88.6 bits (218), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 93/368 (25%), Positives = 145/368 (39%), Gaps = 74/368 (20%)
Query: 307 LAHMSYSVQLEHKKNSIAQMLKKLTRNARKACPNGVSLPEWIMKSREIGGLPCKLEGILG 366
L H++YS QLE K++ + Q ++K T+ I K+ +G
Sbjct: 87 LQHVAYSAQLELKRDIVIQSIEKHTK---------------------IDPTKLKIRPTIG 125
Query: 367 SPLVNGYRNKCEFSVGYSLQAKPTVGFMLGNFREGVTAVEEPV-DCPNVSEIACKYASIF 425
YRNK +F + G N + V P+ DC + K +
Sbjct: 126 MEDPWRYRNKSQFQTRMVGSGQVETGLFGANSHQLV-----PIEDCIVQQPVTIKVTNFV 180
Query: 426 QEFLQQSDLPVWNRFKNSGFWRQLTVREGRSPGKPLDVENLEVNISEVNISEVMLIAQVS 485
++ L++ +P+++ SG R + VR G V E L+ +
Sbjct: 181 RDLLEKYGVPIYDEKAGSGIVRTIVVRTG------------------VKTGETQLVFITN 222
Query: 486 SATFDDAVVNSEFERLAKAFAAGATASSPSLPLTALVIQD-HQGVSNVAPADAPLRLLSI 544
S + E LA+ AA LP ++Q+ +Q S++ D L
Sbjct: 223 SKKLP-----KKREMLAEIEAA--------LPEVTSIMQNVNQAKSSLIFGDETFLLAG- 268
Query: 545 PKADGEPEESNDVVEARIHDSISNLRFCISPTAFFQVNTLAAEKLYSLGGDWADLGPDTL 604
+ES I + + L F +S AFFQ+N E+LY L
Sbjct: 269 -------KES-------IEEKLMELEFDLSARAFFQLNPFQTERLYQEVEKALVLTGSET 314
Query: 605 LFDVCCGTGTIGLTLAHRVGMVIGIEMNASAVSDAHRNAEINGIKNCRFVCAKAEDVMGS 664
L D CG GTIG A +V V G+++ ++ DA RNAE NGI+N + KAEDV+
Sbjct: 315 LVDAYCGVGTIGQAFAGKVKEVRGMDIIPESIEDAKRNAEKNGIENVYYEVGKAEDVLPK 374
Query: 665 LLKDYLNP 672
+ + P
Sbjct: 375 WVNEGFRP 382
>sp|Q99SY9|Y1897_STAAM Uncharacterized RNA methyltransferase SAV1897 OS=Staphylococcus
aureus (strain Mu50 / ATCC 700699) GN=SAV1897 PE=1 SV=1
Length = 453
Score = 88.6 bits (218), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 87/356 (24%), Positives = 142/356 (39%), Gaps = 72/356 (20%)
Query: 307 LAHMSYSVQLEHKKNSIAQMLKKLTRNARKACPNGVSLPEWIMKSREIGGLPCKLEGILG 366
L H+SY QLE KK + + + RKA + K+ +G
Sbjct: 85 LQHLSYEAQLEMKKEQVINLFQ------RKAHFDN-----------------SKINDTVG 121
Query: 367 SPLVNGYRNKCEFSVGYSLQAKPTVGFMLGNFREGVTAVEEPVDCPNVSEIACKYASIFQ 426
YRNK + VG + Q + +GF + + + E+ + SI +
Sbjct: 122 MTDPWRYRNKSQIPVGKNEQNEVIMGFYRQRSHDIIDMESCLIQDSQHQEVMNEVKSILK 181
Query: 427 EFLQQSDLPVWNRFKNSGFWRQLTVREGRSPGKPLDVENLEVNISEVNISEVMLIAQVSS 486
+ ++ ++ G R L VR G + E+M+I +
Sbjct: 182 DL----NVSIYQEQLKKGLMRHLVVRTGY------------------HTDEMMIIFVTNG 219
Query: 487 ATFDDAVVNSEFERLAKAFAAGATASSPSLPLTALVIQDHQGVSNVAPADAPLRLLSIPK 546
+ N+ E++ AF P++ I D SNV + L
Sbjct: 220 KKWPQK--NAVVEKILDAF--------PNVTSIKQNINDSH--SNVIMGRQSITLYG--- 264
Query: 547 ADGEPEESNDVVEARIHDSISNLRFCISPTAFFQVNTLAAEKLYSLGGDWADLGPDTLLF 606
+ I D +++ F IS +F+Q+N+ EKLY+ ++A L + ++
Sbjct: 265 ------------KDTIIDQLTDSTFKISDQSFYQINSEQTEKLYNKAIEYAQLTGNEVVL 312
Query: 607 DVCCGTGTIGLTLAHRVGMVIGIEMNASAVSDAHRNAEINGIKNCRFVCAKAEDVM 662
D CG GTIGL +A V G+E+ S++ DA +NA IN N FVC KAE+V+
Sbjct: 313 DTYCGIGTIGLYMAPHAKHVYGVEVVPSSIEDAQQNATINQCNNTTFVCGKAEEVI 368
>sp|Q7A4Q9|Y1713_STAAN Uncharacterized RNA methyltransferase SA1713 OS=Staphylococcus
aureus (strain N315) GN=SA1713 PE=3 SV=1
Length = 453
Score = 88.6 bits (218), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 87/356 (24%), Positives = 142/356 (39%), Gaps = 72/356 (20%)
Query: 307 LAHMSYSVQLEHKKNSIAQMLKKLTRNARKACPNGVSLPEWIMKSREIGGLPCKLEGILG 366
L H+SY QLE KK + + + RKA + K+ +G
Sbjct: 85 LQHLSYEAQLEMKKEQVINLFQ------RKAHFDN-----------------SKINDTVG 121
Query: 367 SPLVNGYRNKCEFSVGYSLQAKPTVGFMLGNFREGVTAVEEPVDCPNVSEIACKYASIFQ 426
YRNK + VG + Q + +GF + + + E+ + SI +
Sbjct: 122 MTDPWRYRNKSQIPVGKNEQNEVIMGFYRQRSHDIIDMESCLIQDSQHQEVMNEVKSILK 181
Query: 427 EFLQQSDLPVWNRFKNSGFWRQLTVREGRSPGKPLDVENLEVNISEVNISEVMLIAQVSS 486
+ ++ ++ G R L VR G + E+M+I +
Sbjct: 182 DL----NVSIYQEQLKKGLMRHLVVRTGY------------------HTDEMMIIFVTNG 219
Query: 487 ATFDDAVVNSEFERLAKAFAAGATASSPSLPLTALVIQDHQGVSNVAPADAPLRLLSIPK 546
+ N+ E++ AF P++ I D SNV + L
Sbjct: 220 KKWPQK--NAVVEKILDAF--------PNVTSIKQNINDSH--SNVIMGRQSITLYG--- 264
Query: 547 ADGEPEESNDVVEARIHDSISNLRFCISPTAFFQVNTLAAEKLYSLGGDWADLGPDTLLF 606
+ I D +++ F IS +F+Q+N+ EKLY+ ++A L + ++
Sbjct: 265 ------------KDTIIDQLTDSTFKISDQSFYQINSEQTEKLYNKAIEYAQLTGNEVVL 312
Query: 607 DVCCGTGTIGLTLAHRVGMVIGIEMNASAVSDAHRNAEINGIKNCRFVCAKAEDVM 662
D CG GTIGL +A V G+E+ S++ DA +NA IN N FVC KAE+V+
Sbjct: 313 DTYCGIGTIGLYMAPHAKHVYGVEVVPSSIEDAQQNATINQCNNTTFVCGKAEEVI 368
>sp|Q92AV4|Y1815_LISIN Uncharacterized RNA methyltransferase lin1815 OS=Listeria innocua
serovar 6a (strain CLIP 11262) GN=lin1815 PE=3 SV=1
Length = 457
Score = 88.6 bits (218), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 93/368 (25%), Positives = 145/368 (39%), Gaps = 74/368 (20%)
Query: 307 LAHMSYSVQLEHKKNSIAQMLKKLTRNARKACPNGVSLPEWIMKSREIGGLPCKLEGILG 366
L H++Y+ QLE K++ + Q ++K T+ I K+ +G
Sbjct: 87 LQHVAYNAQLELKRDIVIQSIEKHTK---------------------IDPAKLKIRPTIG 125
Query: 367 SPLVNGYRNKCEFSVGYSLQAKPTVGFMLGNFREGVTAVEEPV-DCPNVSEIACKYASIF 425
YRNK +F + G N + V P+ DC + K +
Sbjct: 126 MEDPWRYRNKSQFQTRMVGSGQVETGLFGANSHQLV-----PIEDCIVQQPVTIKVTNFV 180
Query: 426 QEFLQQSDLPVWNRFKNSGFWRQLTVREGRSPGKPLDVENLEVNISEVNISEVMLIAQVS 485
++ L++ +P+++ SG R + VR G V E L+ +
Sbjct: 181 RDLLEKYGVPIYDEKAGSGIIRTIVVRTG------------------VKTGETQLVFITN 222
Query: 486 SATFDDAVVNSEFERLAKAFAAGATASSPSLPLTALVIQD-HQGVSNVAPADAPLRLLSI 544
S + E LA+ AA LP ++Q+ +Q S++ D L
Sbjct: 223 SKKLP-----KKREMLAEIEAA--------LPEVTSIMQNVNQAKSSLIFGDETFLLAG- 268
Query: 545 PKADGEPEESNDVVEARIHDSISNLRFCISPTAFFQVNTLAAEKLYSLGGDWADLGPDTL 604
+ES I + + L F +S AFFQ+N E+LY L
Sbjct: 269 -------KES-------IEEKLMELEFDLSARAFFQLNPFQTERLYQEVEKALVLTGSET 314
Query: 605 LFDVCCGTGTIGLTLAHRVGMVIGIEMNASAVSDAHRNAEINGIKNCRFVCAKAEDVMGS 664
L D CG GTIG A +V V G+++ ++ DA RNAE NGI N + KAEDV+
Sbjct: 315 LVDAYCGVGTIGQAFAGKVKEVRGMDIIPESIEDAKRNAEKNGIDNVYYEVGKAEDVLPK 374
Query: 665 LLKDYLNP 672
+K+ P
Sbjct: 375 WVKEGFRP 382
>sp|Q9KF10|Y687_BACHD Uncharacterized RNA methyltransferase BH0687 OS=Bacillus halodurans
(strain ATCC BAA-125 / DSM 18197 / FERM 7344 / JCM 9153
/ C-125) GN=BH0687 PE=3 SV=1
Length = 458
Score = 88.2 bits (217), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 85/357 (23%), Positives = 145/357 (40%), Gaps = 75/357 (21%)
Query: 307 LAHMSYSVQLEHKKNSIAQMLKKLTRNARKACPNGVSLPEWIMKSREIGGLPCKLEGILG 366
L HMSY QL +K+ + +L+++ + + + E P +
Sbjct: 89 LQHMSYDAQLRYKQKQVQDVLERIGKITAVTVRPTIGMNE-----------PWR------ 131
Query: 367 SPLVNGYRNKCEFSVGYSLQAKPTVGFMLGNFREGVTAVEEPVDCPNVSEIACKYASIFQ 426
YRNK + VG + G + G ++E + + +C E K +
Sbjct: 132 ------YRNKAQVPVG-----EREGGLIAGFYQERSHRIIDMDECMIQHEENDKVIRQVK 180
Query: 427 EFLQQSDLPVWNRFKNSGFWRQLTVREGRSPGKPLDVENLEVNISEVNISEVMLIAQVSS 486
E ++ + ++ K+ G R + R G++ G+ + V+LI +
Sbjct: 181 ELARELGIRGYDEEKHRGTLRHVVARYGKNTGEIM----------------VVLITRGEE 224
Query: 487 ATFDDAVVNSEFERLAKAFAAGATASSPSLPLTALVIQD-HQGVSNVAPADAPLRLLSIP 545
++ ER+ KA +P ++Q+ + +NV D L
Sbjct: 225 LPHKKTLI----ERIHKA-----------IPHVKSIVQNVNPKRTNVIFGDKTKVLWG-- 267
Query: 546 KADGEPEESNDVVEARIHDSISNLRFCISPTAFFQVNTLAAEKLYSLGGDWADLGPDTLL 605
E I+D+I +++F IS +F+QVN + LY ++A+L +
Sbjct: 268 -------------EEYIYDTIGDIKFAISARSFYQVNPEQTKVLYDQALEFANLTGSETV 314
Query: 606 FDVCCGTGTIGLTLAHRVGMVIGIEMNASAVSDAHRNAEINGIKNCRFVCAKAEDVM 662
D CG GTI L LA + V G+E+ A+SDA RNA +NG N +F AE VM
Sbjct: 315 IDAYCGIGTISLFLAQQAKHVYGVEIVPEAISDAKRNARLNGFANVQFAVGDAEKVM 371
>sp|Q8DKB7|Y942_THEEB Uncharacterized RNA methyltransferase tlr0942
OS=Thermosynechococcus elongatus (strain BP-1)
GN=tlr0942 PE=3 SV=1
Length = 449
Score = 85.9 bits (211), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 44/101 (43%), Positives = 63/101 (62%)
Query: 562 IHDSISNLRFCISPTAFFQVNTLAAEKLYSLGGDWADLGPDTLLFDVCCGTGTIGLTLAH 621
+ + ++ +RF I+ T FFQVNT AE+L + DW L D+ CG GT+ L LA
Sbjct: 265 LWEEMAGVRFQIASTTFFQVNTAQAEQLVTTLRDWIAPTGQERLVDLYCGVGTLSLPLAG 324
Query: 622 RVGMVIGIEMNASAVSDAHRNAEINGIKNCRFVCAKAEDVM 662
V VIG+E+++++V A NA+ NGI N FVCAKAE+ +
Sbjct: 325 AVAEVIGVEVHSASVQQAIANAQHNGINNAHFVCAKAEEWL 365
>sp|Q9CDP0|YWFF_LACLA Uncharacterized RNA methyltransferase YwfF OS=Lactococcus lactis
subsp. lactis (strain IL1403) GN=ywfF PE=3 SV=1
Length = 513
Score = 85.9 bits (211), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 90/362 (24%), Positives = 149/362 (41%), Gaps = 61/362 (16%)
Query: 307 LAHMSYSVQLEHKKNSIAQMLKKLTRNARKACPNGVSLPEWIMKSREIGGLPCKLEGILG 366
+ H+SY +QLE K++ + Q L+K + G +L LG
Sbjct: 85 IMHLSYPMQLEFKRDVMRQALEKY---------------------KPAGWRNYELRATLG 123
Query: 367 SPLVNGYRNKCEFSVGYSLQAKPTVGFMLGNFREGVTAVEEPVDC----PNVSEIACKYA 422
GYRNK +F V L + G ++EG + +C P EI
Sbjct: 124 MENTLGYRNKLQFQVR-RLNDGTVIA---GLYQEGTHHLVNLDNCLVQDPKTQEIINHIC 179
Query: 423 SIFQEFLQQSDLPVWNRFKNSGFWRQLTVREGRSPGKPLDVENLEVNISEVNISEVMLIA 482
+ ++F DLPV++ K G R + VR + G EV I V + ++L
Sbjct: 180 RLIEKF----DLPVYDERKIGGI-RTVMVRRSQKTG--------EVQIIFVTSTPIILDG 226
Query: 483 QVSSATFDDAVVNSE--FERLAKAFAAGATASSPSLPLTALVIQDHQGVSNVAPADAPLR 540
QV ++ + F + K +A + ++ + + VA P +
Sbjct: 227 QVWPELREEPSKRQKNSFVKFDKMLSA--------------LTEEFEEIVTVAVNFHPRK 272
Query: 541 LLSIPKADGEPEESNDVVEARIHDSISNLRFCISPTAFFQVNTLAAEKLYSLGGDWADLG 600
I GE + + I + + + F +SP AF+Q+N+ A LY +
Sbjct: 273 TSEIY---GERTQILFNEKETITEGVLDYEFELSPRAFYQLNSEQANVLYGEAVKALNPK 329
Query: 601 PDTLLFDVCCGTGTIGLTLAHRVGMVIGIEMNASAVSDAHRNAEINGIKNCRFVCAKAED 660
D + D CG GTIG +A +V V G+++ ++ DA NA+ G+KNC + KAE
Sbjct: 330 KDDRVIDAYCGVGTIGFAVAKKVKSVHGMDITPESIFDARENAKRLGLKNCHYEIGKAER 389
Query: 661 VM 662
++
Sbjct: 390 II 391
>sp|Q5UQK3|YR405_MIMIV Putative RNA methyltransferase R405 OS=Acanthamoeba polyphaga
mimivirus GN=MIMI_R405 PE=3 SV=1
Length = 389
Score = 85.5 bits (210), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 44/113 (38%), Positives = 66/113 (58%), Gaps = 4/113 (3%)
Query: 562 IHDSISNLRFCISPTAFFQVNTLAAEKLYS----LGGDWADLGPDTLLFDVCCGTGTIGL 617
IH+ + + F I+ +FFQVNTLA E LY+ L + +LFD+CCGTGTIG+
Sbjct: 189 IHEKLDDYIFKITDESFFQVNTLATEVLYNKVLELTMKYIKPTGQDILFDLCCGTGTIGI 248
Query: 618 TLAHRVGMVIGIEMNASAVSDAHRNAEINGIKNCRFVCAKAEDVMGSLLKDYL 670
L+ V GI++ S++ DA+ N +N I N F+C E+V+ L+ + L
Sbjct: 249 YLSKIFTKVFGIDIKQSSIIDANHNKLLNNIPNIEFICNPIENVLEKLISECL 301
Score = 37.7 bits (86), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 39/99 (39%), Gaps = 29/99 (29%)
Query: 297 VKSARDVVTPLAHMSYSVQLEHKKNSIAQMLKKLTRNARKACPNGVSLPEWIMKSREIGG 356
+ ++ L +++YS QL+ K N I Q + L N
Sbjct: 4 INDVSEICLQLVNLNYSDQLDFKLNLIKQYIPNLLTNQ---------------------- 41
Query: 357 LPCKLEGILGSPLVNGYRNKCEFSVGYSLQAKPTVGFML 395
++ SPLV+ YRNK F +G S T+G+ L
Sbjct: 42 -------VIASPLVDNYRNKLRFDIGLSNHDLITIGYSL 73
>sp|Q9CGB9|YLJE_LACLA Uncharacterized RNA methyltransferase YljE OS=Lactococcus lactis
subsp. lactis (strain IL1403) GN=yljE PE=3 SV=1
Length = 460
Score = 85.5 bits (210), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 96/422 (22%), Positives = 164/422 (38%), Gaps = 88/422 (20%)
Query: 261 ESAVPGELAEAHASSNGHEDGNGN-DEGLAGDG---SGLKVKSARDVVTPLAHMSYSVQL 316
++A+PGE + H G G G DE ++ + L + R + H+SY Q+
Sbjct: 41 DNALPGERIKMHVLKVGKSFGFGRVDEFISQSKHRVTQLNLDYLRTGIADFGHLSYDEQV 100
Query: 317 EHKKNSIAQMLKKLTRNARKACPNGVSLPEWIMKSREIGGLPCKLEGILGSPLVNGYRNK 376
+ K + +L+K + LP +E I +N YRNK
Sbjct: 101 KFKHKQVVDILRKTAGKSDYPV------------------LPV-VEAI---KTIN-YRNK 137
Query: 377 CEFSVGYSLQAKPTVGFMLGNFREGVTAVEEPVDCPNVSEIACKYASIFQEFLQQSDLPV 436
+ V + T GF N + + + P + + ++ ++ +L
Sbjct: 138 AQIPVQ-MVDGLLTTGFYRKNSHTLIPVEDFYIQHPEIDAVVL----FLRDEFRKINLQA 192
Query: 437 WNRFKNSGFWRQLTVREGRSPGKPLDVENLEVNISEVNISEVMLIAQVSSATFDDAVVNS 496
++ G+ R + VR G+ M+I V
Sbjct: 193 YDEKTRKGWLRNIVVRRAFHTGE-------------------MMITLV------------ 221
Query: 497 EFERLAKAFAAGATASSPSLPLTALVIQDH--QGVSNVAPADAPLRLLSIPKADGEPEES 554
+S LP ++ DH + +N+ L+I G
Sbjct: 222 --------------VTSKKLPEKVELVIDHLVERFTNIKSVQ-----LNINSGTGSFILG 262
Query: 555 NDVVEARIHDSISNLR----FCISPTAFFQVNTLAAEKLYSLGGDWADLGPDTLLFDVCC 610
+ + D I++L + IS AF+QVNT AEKLY ++A L P ++ D
Sbjct: 263 KEFILLYGKDFITDLMLDKTYQISAPAFYQVNTPQAEKLYETAYEFAGLKPGDVVIDAYS 322
Query: 611 GTGTIGLTLAHRVGMVIGIEMNASAVSDAHRNAEINGIKNCRFVCAKAEDVMGSLLKDYL 670
G GTIG+++A RV V G+E+ +AV +A RNA++N ++N + AE +M L + +
Sbjct: 323 GIGTIGISMADRVAKVYGMEVVPAAVENAKRNAQLNELENTHYEVGTAEKIMPKWLSEGI 382
Query: 671 NP 672
P
Sbjct: 383 KP 384
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.312 0.130 0.379
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 301,332,977
Number of Sequences: 539616
Number of extensions: 13368195
Number of successful extensions: 36747
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 491
Number of HSP's successfully gapped in prelim test: 176
Number of HSP's that attempted gapping in prelim test: 35691
Number of HSP's gapped (non-prelim): 1148
length of query: 783
length of database: 191,569,459
effective HSP length: 126
effective length of query: 657
effective length of database: 123,577,843
effective search space: 81190642851
effective search space used: 81190642851
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 65 (29.6 bits)