Query 003970
Match_columns 782
No_of_seqs 458 out of 3053
Neff 8.1
Searched_HMMs 29240
Date Mon Mar 25 09:57:49 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/003970.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/003970hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3i6s_A Subtilisin-like proteas 100.0 8E-123 3E-127 1080.4 52.2 629 109-769 1-645 (649)
2 3vta_A Cucumisin; subtilisin-l 100.0 1E-112 5E-117 997.2 50.1 608 109-768 1-619 (621)
3 1xf1_A C5A peptidase, SCP; hyd 100.0 2.8E-82 9.4E-87 770.3 42.3 541 123-771 5-608 (926)
4 3afg_A Subtilisin-like serine 100.0 4.3E-60 1.5E-64 543.5 33.0 365 26-619 34-418 (539)
5 2z2z_A TK-subtilisin precursor 100.0 9.4E-58 3.2E-62 507.8 20.5 345 27-619 2-392 (395)
6 3t41_A Epidermin leader peptid 100.0 2.8E-55 9.5E-60 500.2 27.9 361 26-620 43-466 (471)
7 1y9z_A Alkaline serine proteas 100.0 7E-55 2.4E-59 491.6 24.6 378 117-640 7-437 (441)
8 2p4e_P Proprotein convertase s 100.0 3.7E-56 1.3E-60 512.8 7.3 339 29-585 77-422 (692)
9 1r6v_A Subtilisin-like serine 100.0 3.6E-53 1.2E-57 491.4 28.7 378 26-630 30-450 (671)
10 1gci_A Subtilisin; hydrolase, 100.0 3.3E-51 1.1E-55 431.0 20.9 263 117-618 7-269 (269)
11 1dbi_A AK.1 serine protease; h 100.0 7.1E-51 2.4E-55 431.2 23.4 266 117-618 14-279 (280)
12 1r0r_E Subtilisin carlsberg; h 100.0 2.1E-51 7.3E-56 434.1 19.2 264 117-618 7-274 (274)
13 1to2_E Subtilisin BPN'; serine 100.0 4.7E-51 1.6E-55 432.8 19.4 266 117-619 7-276 (281)
14 2x8j_A Intracellular subtilisi 100.0 8.6E-51 2.9E-55 439.9 19.2 273 116-619 23-311 (327)
15 1thm_A Thermitase; hydrolase(s 100.0 6.6E-50 2.3E-54 423.8 22.8 265 117-618 14-278 (279)
16 4h6x_A Thiazoline oxidase/subt 100.0 2.5E-51 8.6E-56 449.7 10.6 312 124-618 20-337 (357)
17 2ixt_A 36KDA protease; serine 100.0 2.6E-49 9E-54 426.4 24.4 288 117-613 9-309 (310)
18 2z30_A TK-subtilisin; thermoco 100.0 1.1E-49 3.8E-54 430.6 17.3 272 117-619 11-317 (320)
19 3zxy_A Subtilisin-like protein 100.0 6.6E-50 2.2E-54 425.1 15.0 267 131-618 3-274 (282)
20 4h6w_A N-terminal cyanobactin 100.0 1E-49 3.5E-54 429.0 12.8 276 123-619 9-288 (306)
21 2iy9_A SUBA; toxin, shiga, pla 100.0 7.4E-49 2.5E-53 429.5 15.9 277 117-619 26-329 (347)
22 1wmd_A Protease; alpha-beta hy 100.0 5.2E-48 1.8E-52 435.1 19.5 296 123-620 9-319 (434)
23 3lpc_A APRB2; protease, subtil 100.0 5.5E-48 1.9E-52 421.7 17.9 303 123-619 20-337 (340)
24 1sh7_A Extracellular subtilisi 100.0 2.3E-46 7.9E-51 397.0 24.8 238 123-586 17-257 (284)
25 3lxu_X Tripeptidyl-peptidase 2 100.0 2.6E-46 8.8E-51 450.7 27.2 361 215-771 267-655 (1354)
26 2pwa_A Proteinase K; structure 100.0 2.1E-46 7.3E-51 396.2 18.9 240 127-613 24-271 (279)
27 2b6n_A Proteinase K; S binding 100.0 6.8E-46 2.3E-50 392.8 22.1 239 123-585 19-260 (278)
28 4dzt_A Aqualysin-1, aqualysin- 100.0 9.6E-46 3.3E-50 391.7 22.3 238 123-586 19-259 (276)
29 2oxa_A Extracellular serine pr 100.0 2.3E-45 7.9E-50 429.1 22.6 304 122-623 57-429 (600)
30 1p8j_A Furin precursor; prohor 100.0 1.7E-45 5.7E-50 418.2 18.3 296 122-621 25-332 (471)
31 2qtw_B Proprotein convertase s 100.0 1.1E-44 3.9E-49 407.2 19.3 246 127-585 18-270 (546)
32 2id4_A Kexin; KEX2, kexin, fur 100.0 9.4E-45 3.2E-49 414.8 18.1 288 122-621 41-344 (503)
33 3f7m_A Alkaline serine proteas 100.0 2.5E-44 8.5E-49 381.5 18.2 230 126-586 24-261 (279)
34 3hjr_A Extracellular serine pr 100.0 7.5E-43 2.6E-47 409.4 24.5 301 122-621 57-427 (600)
35 1t1e_A Kumamolisin; proenzyme, 99.9 2.1E-24 7E-29 247.3 5.9 97 245-351 273-383 (552)
36 1ga6_A Serine-carboxyl protein 99.8 8E-21 2.7E-25 207.4 10.6 101 247-351 90-206 (372)
37 3edy_A Tripeptidyl-peptidase 1 99.0 6.2E-10 2.1E-14 126.6 10.2 101 246-351 261-374 (544)
38 2w2n_P Proprotein convertase s 98.9 1.3E-09 4.4E-14 98.0 6.9 78 26-107 36-113 (114)
39 3cnq_P Subtilisin BPN'; unclea 98.8 2.4E-08 8.1E-13 83.9 9.0 74 25-111 6-79 (80)
40 3icu_A E3 ubiquitin-protein li 98.6 3.3E-07 1.1E-11 89.4 12.1 100 379-481 72-186 (194)
41 2qtw_A Proprotein convertase s 98.6 8.8E-08 3E-12 87.1 7.0 78 26-107 46-123 (124)
42 1v5i_B POIA1, IA-1=serine prot 98.5 6.9E-07 2.4E-11 73.9 9.5 70 28-107 3-75 (76)
43 2z30_B TK-subtilisin; thermoco 97.1 0.00078 2.7E-08 53.6 5.9 62 28-106 2-63 (65)
44 2ek8_A Aminopeptidase; metallo 96.5 0.0085 2.9E-07 66.3 10.9 70 397-468 107-182 (421)
45 3iib_A Peptidase M28; YP_92679 95.3 0.052 1.8E-06 60.3 10.0 96 378-479 107-224 (444)
46 3kas_A Transferrin receptor pr 94.4 0.053 1.8E-06 62.7 7.2 66 401-468 128-230 (640)
47 3fed_A Glutamate carboxypeptid 94.4 0.048 1.6E-06 63.8 6.8 67 400-468 150-267 (707)
48 2ys4_A Hydrocephalus-inducing 93.7 0.34 1.2E-05 43.2 9.8 73 683-764 41-114 (122)
49 3lxu_X Tripeptidyl-peptidase 2 87.4 0.28 9.7E-06 60.5 3.5 25 130-154 31-55 (1354)
50 1y9z_A Alkaline serine proteas 85.3 2 6.8E-05 47.4 8.8 31 489-527 182-212 (441)
51 3qbt_B Inositol polyphosphate 84.0 8.6 0.00029 35.0 11.0 85 683-769 43-138 (140)
52 2r39_A FIXG-related protein; s 68.1 20 0.00069 31.3 8.5 53 684-739 32-84 (118)
53 2e6j_A Hydin protein; PAPD, st 68.0 7.1 0.00024 33.6 5.5 66 672-739 13-81 (112)
54 2qsv_A Uncharacterized protein 58.3 51 0.0017 32.1 10.3 80 684-768 20-105 (220)
55 3idu_A Uncharacterized protein 55.6 43 0.0015 29.7 8.3 53 682-738 32-84 (127)
56 3zyz_A Beta-D-glucoside glucoh 50.4 1.8E+02 0.0061 33.8 14.6 54 684-739 614-674 (713)
57 3qis_A Inositol polyphosphate 50.3 43 0.0015 35.6 8.7 86 683-770 46-142 (366)
58 2x41_A Beta-glucosidase; hydro 41.5 2E+02 0.007 33.3 13.4 69 670-739 597-677 (721)
59 1wgl_A TOLL-interacting protei 38.3 22 0.00075 27.1 2.9 36 549-584 3-38 (59)
60 1w8o_A Bacterial sialidase; 3D 36.0 2.2E+02 0.0077 31.8 12.5 65 672-741 363-428 (601)
61 1m1s_A WR4; structural genomic 33.7 1.9E+02 0.0065 25.1 8.6 50 686-739 26-75 (116)
62 3isy_A Bsupi, intracellular pr 32.6 2.5E+02 0.0086 24.5 9.5 69 681-752 16-102 (120)
63 1z9l_A Vesicle-associated memb 30.9 1.2E+02 0.0043 26.5 7.3 53 683-739 27-79 (128)
64 3abz_A Beta-glucosidase I; gly 30.4 1.7E+02 0.0057 34.8 10.2 69 669-739 716-798 (845)
65 1msp_A MSP, major sperm protei 29.6 1.4E+02 0.0049 26.1 7.4 51 684-738 26-76 (126)
66 2qsv_A Uncharacterized protein 29.4 3.8E+02 0.013 25.6 11.4 88 674-765 124-217 (220)
67 2kq1_A BH0266 protein; solutio 28.7 12 0.00042 32.8 0.1 45 691-738 61-109 (119)
68 1wic_A Hypothetical protein ri 28.6 1.4E+02 0.0046 27.3 7.2 52 684-739 36-87 (152)
69 1row_A SSP-19, MSP-domain prot 25.7 2.4E+02 0.0083 24.0 7.9 50 686-739 18-67 (109)
70 2cri_A Vesicle-associated memb 24.1 1.6E+02 0.0056 26.5 6.9 52 684-739 32-83 (147)
71 1ni7_A ER75, hypothetical prot 23.6 57 0.0019 30.1 3.6 32 545-577 79-110 (155)
72 2l0d_A Cell surface protein; s 23.0 2.7E+02 0.0093 24.0 7.7 26 682-707 18-43 (114)
No 1
>3i6s_A Subtilisin-like protease; PA-domain, FN3-domain, hydrolase; HET: NAG FUC; 2.50A {Solanum lycopersicum} PDB: 3i74_A*
Probab=100.00 E-value=7.7e-123 Score=1080.45 Aligned_cols=629 Identities=37% Similarity=0.620 Sum_probs=568.9
Q ss_pred cccccccccccccCCCCccCCCCCCCCCcEEEEeccccCCCCCCCCCCCCCCCCCCCccceeeccCcCCCCcccCcceee
Q 003970 109 TTRSWDFMGLILDNTGEVTPVQLAYGDDIVVGIFDTGVWPESESFQEEPSMSPIPSSWKGTCVRGEKFDPQKACNRKLIG 188 (782)
Q Consensus 109 ~~~s~~~~gl~~~~~~~~~~~~~~~G~gV~VgVIDtGId~~Hp~f~d~~~~~~~~~~~~g~~~~g~~f~~~~~~n~kiig 188 (782)
|+++|+|+||.. ...+|..+.+|+||+|||||||||++||+|.+.+ ++|+|.+|+|.|+.+.+|+. ..||+|++|
T Consensus 1 Tt~s~~flgl~~---~~~~w~~~~~G~gViVaViDTGId~~Hp~f~d~g-~~p~p~~wkg~c~~g~~f~~-~~cN~kiig 75 (649)
T 3i6s_A 1 TTHTSDFLKLNP---SSGLWPASGLGQDVIVAVLDSGIWPESASFQDDG-MPEIPKRWKGICKPGTQFNA-SMCNRKLIG 75 (649)
T ss_dssp CCSHHHHTTCCS---SSSHHHHHGGGTTCEEEEEESCBCTTSGGGCCTT-CCCCCTTCCCCBCCBTTBCT-TSCCSSEEE
T ss_pred CCCChHHcCCCC---chhhHhccCCCCCCEEEEEccCCCCCChhhccCC-CCCCccccccccccCccccc-cccccceee
Confidence 578999999973 4679999999999999999999999999999987 99999999999999999998 899999999
Q ss_pred eEecccccccccCCCCCCCCCCCCCCCCCCCCchhhhhhhccccccCCcccccCCcceeeecCCCeEEEEEeeeCCCCCC
Q 003970 189 ARYYVKGFEEEYGPLNASTNREYRSARDFLGHGTHTASTAAGSIAKNAGFFGLGRGIARGGAPRARLAVYKICWGKDSDG 268 (782)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~gHGTHVAgiaag~~~~~~~~~G~~~g~~~GVAP~A~l~~~kv~~~~~~~~ 268 (782)
+++|.+++.... .+ ...+..+++|.+||||||||||||+.+++.+++|++.+.+.||||+|+|++||+|+..+
T Consensus 76 ~~~f~~~~~~~~--~~--~~~~~~~~~D~~GHGThVAgiiag~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~g--- 148 (649)
T 3i6s_A 76 ANYFNKGILAND--PT--VNITMNSARDTDGHGTHCASITAGNFAKGVSHFGYAPGTARGVAPRARLAVYKFSFNEG--- 148 (649)
T ss_dssp EEECCHHHHHHC--TT--CCCTTCSSBCSSSHHHHHHHHHHCCCEEEEEETTEEEEEECCSSTTCEEEEEECEETTE---
T ss_pred eEeccCcccccc--cc--cccCCCCCCCCCCcHHHHHHHHhCCCCcCccccccccCceeEECCCCEEEEEeccCCCC---
Confidence 999987654332 11 12345678899999999999999999999999999999999999999999999999875
Q ss_pred CCCHHHHHHHHHHHhhcCCcEEEecccCCCCCCCCccChHHHHHHhhhccCceEEEecCCCCCCCCCcccCCCceEEecc
Q 003970 269 KCTEADILAAFDDALHDGVDVISASFGESPPLRPFFASNADIGSFNAMQHGVTVVFSGGNDGPEPSLVQNVAPWSICVAA 348 (782)
Q Consensus 269 ~~~~~~i~~ai~~a~~~gvdVIn~SlG~~~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~G~~~~~~~~~ap~vitVgA 348 (782)
+..+++++||+||+++|+||||||||... ..+..+.+..++++|+++|++||+||||+|+...++.+.+||+|+|||
T Consensus 149 -~~~~~i~~Ai~~A~~~gvdVIn~SlG~~~--~~~~~~~i~~a~~~A~~~Gi~vV~AAGN~G~~~~t~~~~ap~vitVgA 225 (649)
T 3i6s_A 149 -TFTSDLIAAMDQAVADGVDMISISYGYRF--IPLYEDAISIASFGAMMKGVLVSASAGNRGPGIGSLNNGSPWILCVAS 225 (649)
T ss_dssp -ECHHHHHHHHHHHHHTTCSEEEECCCCCS--CCGGGCHHHHHHHHHHHTTCEEEEECCSCTTSTTCCSCCCTTSEEEEE
T ss_pred -CCHHHHHHHHHHHHHcCCCEEEeCCccCC--cccchhHHHHHHHHHHhCCcEEEEeCCCCCCCCCccCCCCCceEEEee
Confidence 99999999999999999999999999875 677889999999999999999999999999999999999999999999
Q ss_pred cccCcccceeEEeCCccEEEeeeeecccc---eeeEEEccccccCCccccCCCCCCCC--CceEEEEeeCCCCccHHHHH
Q 003970 349 SSIDRTFPTEIVVNSDFSIVGESFISTEV---KAKLVEAFTYFADGICKCENWMGRKA--TGRVVLCFSTMGSVKTEEAE 423 (782)
Q Consensus 349 s~~d~~~~~~~~~~~~~~~~g~~~~~~~~---~~~lv~~~~~~~~~~c~~~~~~~~~~--~gkiv~~~~g~~~~~~~~k~ 423 (782)
++.||.|+..+.++|++.+.|.+++.... .+|+++.. ....|.+..+++.++ +|||++|.|+.+. +.+|.
T Consensus 226 st~dr~f~~~~~lgng~~~~g~sl~~~~~~~~~~plv~~~---~~~~C~~~~l~~~~vdl~GkIvlc~~g~~~--~~~k~ 300 (649)
T 3i6s_A 226 GHTDRTFAGTLTLGNGLKIRGWSLFPARAFVRDSPVIYNK---TLSDCSSEELLSQVENPENTIVICDDNGDF--SDQMR 300 (649)
T ss_dssp EECSCEEEEEEEETTSCEEEEECCCSSCBCEEEEEEECCT---TTTTCCCHHHHTTSSSGGGCEEEECCCSCH--HHHHH
T ss_pred eecccceeeEEEeCCCcEEeeeecccCcccCcceeeEecc---cccccccccccccccccCCcEEEEeCCCcc--HHHHH
Confidence 99999999999999999999999987653 28999976 467899988888877 9999999999875 99999
Q ss_pred HHHHHcCceEEEEecCCCccccccccccEEEEehhhHHHHHHHHhcCCCCcEEEEccCccccCCCCCCccccccCCCCCC
Q 003970 424 AAAKKANASGLIFAEPMTELIAEVDIIPTVRIDIAQGTQLRDYLAQFPRLPIVQLKPSKTSIGKVPAPTVAYFSSRGPSS 503 (782)
Q Consensus 424 ~~~~~~Ga~g~i~~n~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSS~Gp~~ 503 (782)
.+++++|+.|+|++|+......+.+.+|+++++..+|+.|++|++ ++.+++++|.+..+..+..+.+.++.||||||+.
T Consensus 301 ~~~~~~Ga~g~i~~n~~~~~~~~~~~~P~~~v~~~~g~~i~~yi~-s~~~~~a~i~~~~t~~~~~~~~~va~FSSrGP~~ 379 (649)
T 3i6s_A 301 IITRARLKAAIFISEDPGVFRSATFPNPGVVVNKKEGKQVINYVK-NSVTPTATITFQETYLDTKPAPVVAASSARGPSR 379 (649)
T ss_dssp HHHHHTCSEEEEECCCGGGGGCCCCCSCEEEECHHHHHHHHHHHH-TCSSCEEEEEEEEEECCCSSCCEECTTSCCSSCT
T ss_pred HHHHhcCceEEEEecCccccccccCcCCEEEEcHHHHHHHHHHHh-cCCCceEEEeecceeeccCCCCcccccCCCCCCC
Confidence 999999999999999987666778899999999999999999999 9999999999999998888899999999999998
Q ss_pred CCCCCcccceeecCceEEeecCCCCCCCCCCCCC-CccceeeeccccchhhHHHHHHHHHHHhCCCCCHHHHHHHHHhcc
Q 003970 504 ISPDILKPDITAPGIGVLAAWPPNTPPTLLPSDG-RSVKWNFQSGTSMSCPHVSGVVALIKSAHPNWSPAAIRSALMTTA 582 (782)
Q Consensus 504 ~~~~~~KPDI~APG~~I~sa~~~~~~~~~~~~~~-~~~~y~~~sGTSmAaP~VAG~aALl~q~~P~lsp~~Ik~~L~~TA 582 (782)
..++++||||+|||++|+++|+..........+. +...|..+||||||||||||++|||||+||+|+|++||++||+||
T Consensus 380 ~~~~ilKPDI~APG~~Ilsa~~~~~~~~~~~~d~~~~~~y~~~SGTSMAaPhVAGvaALlks~~P~~Spa~IksaLmtTA 459 (649)
T 3i6s_A 380 SYLGISKPDILAPGVLILAAYPPNVFATSIGTNILLSTDYILESGTSMAAPHAAGIAAMLKAAHPEWSPSAIRSAMMTTA 459 (649)
T ss_dssp TCTTSCSCCEEEECSSEEEECCTTSCCEEETTTEEECCSEEEECSHHHHHHHHHHHHHHHHHHSTTCCHHHHHHHHHHTC
T ss_pred CCCCccCCeEEeCCCCeEeecCCCCCccccccccccccceecccccccccHHHHHHHHHHHHhCCCCCHHHHHHHHhccc
Confidence 7789999999999999999999865433322222 335899999999999999999999999999999999999999999
Q ss_pred ccCCCCCCccccCCCCCcCCCCCccccccCccccCCCceeecCCchhhHhhhhccCCCccceeeecCCCCCCCCCcc--C
Q 003970 583 YTRDTSHDSILAGGSMKVSDPFDIGAGHINPMKAMDPGLIYDLKPTDYIVFLRNIGYTQDQINKIFLPSPDETERTS--C 660 (782)
Q Consensus 583 ~~~~~~g~~~~~~~~~~~~~~~~~G~G~vn~~~Al~~glv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--c 660 (782)
.++++.+.++.++....++++++||+|+||+.+|++||||||++++||+.|||++||+..+|+.+++ .++. |
T Consensus 460 ~~~~~~g~~i~~~~~~~~a~~~~~GaG~vn~~~A~~pGLvyd~~~~dy~~flc~~~y~~~~i~~~~~------~~~~~~C 533 (649)
T 3i6s_A 460 DPLDNTRKPIKDSDNNKAATPLDMGAGHVDPNRALDPGLVYDATPQDYVNLLCSLNFTEEQFKTIAR------SSASHNC 533 (649)
T ss_dssp BCBCTTSSBCEETTTSSBCCHHHHTTCBCCHHHHTCCSEECCCCHHHHHHHHHTTCCCHHHHHHHHT------TTSCC-C
T ss_pred ccccCCCCcccccccCCcCCcCCCCeeeeCHHHhcCccccccCCchhHHHhhhcCCCCcccceeeec------CCCcCCC
Confidence 9999999999887677888999999999999999999999999999999999999999999999998 6677 9
Q ss_pred CCCCCCCCCCCCcCeEEEee-cCce-----EEEEEEEEecCCCCCeEEEEEEeCCCccEEEEEcceeEeccCCeEEEEEE
Q 003970 661 PQAHKIPNSFINYPSITVSN-LQST-----MTIKRTVKNVGQKKNAIYFASVVKPGGVEVVVWPRVLVFSWFKEEVSYYV 734 (782)
Q Consensus 661 ~~~~~~~~~~ln~ps~~~~~-~~~~-----~~~~rtvtnv~~~~~~ty~~~~~~p~g~~v~v~p~~~~~~~~g~~~~~~v 734 (782)
+. .+.+||||||++.+ +.+. ++|+|||||||+. .++|+++++.|.|++|+|+|++|+|.+.+|+++|+|
T Consensus 534 ~~----~~~~lNyPs~~~~~~~~~~~~~~~~~~~Rtvtnvg~~-~~~y~~~v~~p~g~~v~v~P~~l~f~~~~~~~~f~v 608 (649)
T 3i6s_A 534 SN----PSADLNYPSFIALYSIEGNFTLLEQKFKRTVTNVGKG-AATYKAKLKAPKNSTISVSPQILVFKNKNEKQSYTL 608 (649)
T ss_dssp CC----CCCCCCCSSEEEEECCSSCCCCEEEEEEEEEEECC---CEEEEEEEECCTTEEEEEESSEEEECC-CCEEEEEE
T ss_pred CC----chhhcCCCcEEeecccCCCCccceEEEEEEEEEeCCC-CcEEEEEEecCCCCEEEEECCEEEEecCCCEEEEEE
Confidence 86 35799999999998 5656 8999999999987 899999999999999999999999988999999999
Q ss_pred EEEecccCCCceEEEEEEEEc--CceEEEeEEEEEEc
Q 003970 735 SLKPLKMSQGRFDFGQIVWSD--GFHYVRSPLVVFVN 769 (782)
Q Consensus 735 ~~~~~~~~~~~~~~G~~~~~~--~~~~v~~P~~~~~~ 769 (782)
+|+......+.|.||+|+|+| ++|.||+||+|+..
T Consensus 609 ~~~~~~~~~~~~~fg~l~w~~~~~~h~vrsPi~v~~~ 645 (649)
T 3i6s_A 609 TIRYIGDEGQSRNVGSITWVEQNGNHSVRSPIVTSPI 645 (649)
T ss_dssp EEEECCC---CCCEEEEEEEETTSCCEEEEEEEEEEC
T ss_pred EEEecccCCCceEEEEEEEEcCCCCeEEEEeEEEEEc
Confidence 999865556678999999999 89999999999876
No 2
>3vta_A Cucumisin; subtilisin-like fold, serine protease, hydrolase; HET: DFP NAG FUC BMA MAN; 2.75A {Cucumis melo}
Probab=100.00 E-value=1.5e-112 Score=997.23 Aligned_cols=608 Identities=39% Similarity=0.686 Sum_probs=511.6
Q ss_pred cccccccccccccCCCCccCCCCCCCCCcEEEEeccccCCCCCCCCCCCCCCCCCCCccceeeccCcCCCCcccCcceee
Q 003970 109 TTRSWDFMGLILDNTGEVTPVQLAYGDDIVVGIFDTGVWPESESFQEEPSMSPIPSSWKGTCVRGEKFDPQKACNRKLIG 188 (782)
Q Consensus 109 ~~~s~~~~gl~~~~~~~~~~~~~~~G~gV~VgVIDtGId~~Hp~f~d~~~~~~~~~~~~g~~~~g~~f~~~~~~n~kiig 188 (782)
|+++|+|+||+.. +|.+..+|+||+|||||||||++||+|+|.+ +++++.+|+|.|+.+.+| .||+|++|
T Consensus 1 tt~s~~flGl~~~-----~~~~~~~G~gViVgViDTGId~~Hp~f~d~g-~~~~~~~w~g~~~~~~~~----~~n~k~ig 70 (621)
T 3vta_A 1 TTRSWDFLGFPLT-----VPRRSQVESNIVVGVLDTGIWPESPSFDDEG-FSPPPPKWKGTCETSNNF----RCNRKIIG 70 (621)
T ss_dssp CCSHHHHTTCCTT-----CCCCHHHHTTCEEEEEESCBCTTSGGGCCTT-CCCCCTTCCCCBCCSSSC----CCCSSEEE
T ss_pred CCCChhHcCCCcc-----ccccCCCCCCCEEEEEecCCCCCChhhcCCC-CCCcccccccccccCCCc----ccCcceee
Confidence 5789999999854 8888899999999999999999999999887 999999999999988764 59999999
Q ss_pred eEecccccccccCCCCCCCCCCCCCCCCCCCCchhhhhhhccccccCCcccccCCcceeeecCCCeEEEEEeeeCCCCCC
Q 003970 189 ARYYVKGFEEEYGPLNASTNREYRSARDFLGHGTHTASTAAGSIAKNAGFFGLGRGIARGGAPRARLAVYKICWGKDSDG 268 (782)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~gHGTHVAgiaag~~~~~~~~~G~~~g~~~GVAP~A~l~~~kv~~~~~~~~ 268 (782)
+++|..+..... .+..+++|.+||||||||||||+...+.+++|++.+.++||||+|+|++||+|++.+
T Consensus 71 ~~~~~~~~~~~~--------~~~~~p~D~~GHGTHvAgi~AG~~~~~~~~~g~~~g~~~GvAP~A~l~~~kv~~~~g--- 139 (621)
T 3vta_A 71 ARSYHIGRPISP--------GDVNGPRDTNGHGTHTASTAAGGLVSQANLYGLGLGTARGGVPLARIAAYKVCWNDG--- 139 (621)
T ss_dssp EEECCCSSSCCT--------TCCSSSBCSSSHHHHHHHHHHCCCEEEEEETTEEEEEECCSCTTSEEEEEECEETTE---
T ss_pred eeecccCCccCC--------CCCCCCCCCCcCHHHHHHHHhCcCCCCccccccccccEEEECCCCEEEEEEeecCCC---
Confidence 999987654332 244678999999999999999999888888898888999999999999999999875
Q ss_pred CCCHHHHHHHHHHHhhcCCcEEEecccCCCCCCCCccChHHHHHHhhhccCceEEEecCCCCCCCCCcccCCCceEEecc
Q 003970 269 KCTEADILAAFDDALHDGVDVISASFGESPPLRPFFASNADIGSFNAMQHGVTVVFSGGNDGPEPSLVQNVAPWSICVAA 348 (782)
Q Consensus 269 ~~~~~~i~~ai~~a~~~gvdVIn~SlG~~~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~G~~~~~~~~~ap~vitVgA 348 (782)
|..+++++||++|+++|+||||||||+..+ ..+..+++++++++|+++||+||+||||+|+...++.+.+||+++|++
T Consensus 140 -~~~~di~~a~~~a~~~g~dVin~SlG~~~~-~~~~~~~~~~~~~~a~~~Gi~vv~aAGN~g~~~~t~~~~a~~~~~v~a 217 (621)
T 3vta_A 140 -CSDTDILAAYDDAIADGVDIISLSVGGANP-RHYFVDAIAIGSFHAVERGILTSNSAGNGGPNFFTTASLSPWLLSVAA 217 (621)
T ss_dssp -ECHHHHHHHHHHHHHHTCSEEEECCCCCCG-GGGGGCTHHHHHHHHHTTTCEEEEECCSCCSSTTCCCCCCTTSEEEEE
T ss_pred -CCHHHHHHHHHHHHHhCCCEEEecCCCCCC-CCcCCcHHHHHHHHHHHCCCEEEEeCCCCCCCCcccCCCCCCceeEEE
Confidence 889999999999999999999999998753 456678899999999999999999999999999999999999999999
Q ss_pred cccCcccceeEEeCCccEEEeeeeecccce-eeEEEccccc-------cCCccccCCCCCCCCCceEEEEeeCCCCccHH
Q 003970 349 SSIDRTFPTEIVVNSDFSIVGESFISTEVK-AKLVEAFTYF-------ADGICKCENWMGRKATGRVVLCFSTMGSVKTE 420 (782)
Q Consensus 349 s~~d~~~~~~~~~~~~~~~~g~~~~~~~~~-~~lv~~~~~~-------~~~~c~~~~~~~~~~~gkiv~~~~g~~~~~~~ 420 (782)
++.||.|...+.++++..+.+.+++..... ++++...... ....|.+..+++.+++|||++|.++. .
T Consensus 218 st~d~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~gkivl~~~~~-----~ 292 (621)
T 3vta_A 218 STMDRKFVTQVQIGNGQSFQGVSINTFDNQYYPLVSGRDIPNTGFDKSTSRFCTDKSVNPNLLKGKIVVCEASF-----G 292 (621)
T ss_dssp ECCSEEEEEEEEETTSCEEEEBCCCCSCCEEECEEETTTSCCTTCCHHHHTTTCTTCSCGGGTTTSEEECSSCC-----C
T ss_pred eeccccceeeEEeccCceeeeeecccCCCcccccccccccccccccccccccccccccccccccceEEEEecCC-----C
Confidence 999999999999999999999887765433 7777765533 24579999999999999999998764 3
Q ss_pred HHHHHHHHcCceEEEEecCCCccccccccccEEEEehhhHHHHHHHHhcCCCCcEEEEccCccccCCCCCCccccccCCC
Q 003970 421 EAEAAAKKANASGLIFAEPMTELIAEVDIIPTVRIDIAQGTQLRDYLAQFPRLPIVQLKPSKTSIGKVPAPTVAYFSSRG 500 (782)
Q Consensus 421 ~k~~~~~~~Ga~g~i~~n~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSS~G 500 (782)
.+..+....|+.++|++++... ..+.+.+|...++..++..++.|+. .+..+.+++....+.. ....+.++.|||||
T Consensus 293 ~~~~~~~~~Ga~gvi~~~~~~~-~~~~~~lP~~~v~~~~g~~i~~~~~-~~~~~~a~~~~~~~~~-~~~~~~va~FSSrG 369 (621)
T 3vta_A 293 PHEFFKSLDGAAGVLMTSNTRD-YADSYPLPSSVLDPNDLLATLRYIY-SIRSPGATIFKSTTIL-NASAPVVVSFSSRG 369 (621)
T ss_dssp HHHHHHHHTTCSEEEEECSCCS-SCCCCSSSEEEECHHHHHHHHHHHH-HHSSCCEEECCCEEEE-CTTCCCBCTTSCCC
T ss_pred hhHHhhhhcceeEEEEEecCCC-cccccccceEEECHHHHHHHHHHHh-ccCCcceEEecceEec-cCCCCceeeecCCC
Confidence 5677888899999999988653 3456789999999999999999999 7777888776655443 45688999999999
Q ss_pred CCCCCCCCcccceeecCceEEeecCCCCCCCCCCCCCCccceeeeccccchhhHHHHHHHHHHHhCCCCCHHHHHHHHHh
Q 003970 501 PSSISPDILKPDITAPGIGVLAAWPPNTPPTLLPSDGRSVKWNFQSGTSMSCPHVSGVVALIKSAHPNWSPAAIRSALMT 580 (782)
Q Consensus 501 p~~~~~~~~KPDI~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~P~lsp~~Ik~~L~~ 580 (782)
|+...++++||||+|||++|+|+++....... +.....|..+||||||||||||++|||||+||+|+|++||++||+
T Consensus 370 P~~~~~~ilKPDI~APG~~Ilsa~~~~~~~~~---~~~~~~y~~~SGTSMAaPhVAGvaALl~q~~P~~spa~IksaLmt 446 (621)
T 3vta_A 370 PNRATKDVIKPDISGPGVEILAAWPSVAPVGG---IRRNTLFNIISGTSMSCPHITGIATYVKTYNPTWSPAAIKSALMT 446 (621)
T ss_dssp SCTTCTTSCSCCEEEECSSEEEECCSSSCBTT---BCCCCSEEEECSHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHH
T ss_pred CCCCCCCeeccccccCCcceEeecCccccccC---cCCCCcceEecCccccchhhhhHHHHHHHHCCCCCHHHHHHHHHh
Confidence 99877899999999999999999987543322 233458999999999999999999999999999999999999999
Q ss_pred ccccCCCCCCccccCCCCCcCCCCCccccccCccccCCCceeecCCchhhHhhhhccCCCccceeeecCCCCCCCCCccC
Q 003970 581 TAYTRDTSHDSILAGGSMKVSDPFDIGAGHINPMKAMDPGLIYDLKPTDYIVFLRNIGYTQDQINKIFLPSPDETERTSC 660 (782)
Q Consensus 581 TA~~~~~~g~~~~~~~~~~~~~~~~~G~G~vn~~~Al~~glv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c 660 (782)
||++++..+. ++.+++||+|+||+.+|++||||||++.+||+.|||+++|+..+++.+++ ....|
T Consensus 447 TA~~~~~~~~---------~~~~~~~GaG~v~~~~A~~pGLvyd~~~~dy~~~lc~~~~~~~~~~~~~~------~~~~~ 511 (621)
T 3vta_A 447 TASPMNARFN---------PQAEFAYGSGHVNPLKAVRPGLVYDANESDYVKFLCGQGYNTQAVRRITG------DYSAC 511 (621)
T ss_dssp TCBCCCTTTC---------TTTHHHHTTCBCCHHHHSCCSEECCCCGGGCC-----------------------------
T ss_pred cCCcccccCC---------CCCchhcCCCccCHHHhcCCCeEeecccchhhhhhcccCCCchhheeeec------ccccc
Confidence 9998775443 45778999999999999999999999999999999999999999999998 67888
Q ss_pred CCCCCCCCCCCCcCeEEEe---ecCceEEEEEEEEecCCCCCeEEEEEEeCCCccEEEEEcceeEeccCCeEEEEEEEEE
Q 003970 661 PQAHKIPNSFINYPSITVS---NLQSTMTIKRTVKNVGQKKNAIYFASVVKPGGVEVVVWPRVLVFSWFKEEVSYYVSLK 737 (782)
Q Consensus 661 ~~~~~~~~~~ln~ps~~~~---~~~~~~~~~rtvtnv~~~~~~ty~~~~~~p~g~~v~v~p~~~~~~~~g~~~~~~v~~~ 737 (782)
+........+||||||++. ++..+++|+|||||||.. ..+|+++++.|+|++|+|+|++|+|++.+|+++|+|+|+
T Consensus 512 ~~~~~~~~~~lN~pS~~v~~~~~~~~~~t~~rtvtnvg~~-~~ty~~~v~~p~gv~v~V~P~~l~f~~~~~~~~~~vt~~ 590 (621)
T 3vta_A 512 TSGNTGRVWDLNYPSFGLSVSPSQTFNQYFNRTLTSVAPQ-ASTYRAMISAPQGLTISVNPNVLSFNGLGDRKSFTLTVR 590 (621)
T ss_dssp ------CGGGSCCSSEEEECCSSCCEEEEEEEEEEECSSS-CEEEEEEEECCSSEEEEEESSEEEECSTTCEEEEEEEEE
T ss_pred CCCCcCcccccccccEEEEccCCCceEEEEEEEEEccCCC-CeEEEEEEECCCCcEEEEecCEEEEcCCCcEEEEEEEEE
Confidence 8755435689999999985 455789999999999988 999999999999999999999999998899999999998
Q ss_pred ecccCCCceEEEEEEEEcCceEEEeEEEEEE
Q 003970 738 PLKMSQGRFDFGQIVWSDGFHYVRSPLVVFV 768 (782)
Q Consensus 738 ~~~~~~~~~~~G~~~~~~~~~~v~~P~~~~~ 768 (782)
. ..++.|+||+|+|+|++|.||+||+|+.
T Consensus 591 ~--~~~~~~~~g~l~w~d~~h~Vr~Pi~v~~ 619 (621)
T 3vta_A 591 G--SIKGFVVSASLVWSDGVHYVRSPITITS 619 (621)
T ss_dssp E--CCCSSEEEEEEEEECSSCCCEEEEEEEC
T ss_pred e--cCCCceEEEEEEEEcCCEEEEeCEEEEE
Confidence 5 4678899999999999999999999985
No 3
>1xf1_A C5A peptidase, SCP; hydrolase; HET: CIT; 1.90A {Streptococcus pyogenes} PDB: 3eif_A*
Probab=100.00 E-value=2.8e-82 Score=770.27 Aligned_cols=541 Identities=22% Similarity=0.277 Sum_probs=426.7
Q ss_pred CCCccCCCCCCCCCcEEEEeccccCCCCCCCCCCCCCCCCCCCccceeeccCcC---------CCCcccCcceeeeEecc
Q 003970 123 TGEVTPVQLAYGDDIVVGIFDTGVWPESESFQEEPSMSPIPSSWKGTCVRGEKF---------DPQKACNRKLIGARYYV 193 (782)
Q Consensus 123 ~~~~~~~~~~~G~gV~VgVIDtGId~~Hp~f~d~~~~~~~~~~~~g~~~~g~~f---------~~~~~~n~kiig~~~~~ 193 (782)
+++.+|..+.+|+||+|||||||||++||+|.+. ..|++.|..+..| .....||+|++++++|.
T Consensus 5 ~~~~~w~~~~~G~GV~VaVIDTGId~~Hp~f~~~-------~~~~~~~~~~~~~~~~~~~~g~~~g~~~n~Kii~~~~~~ 77 (926)
T 1xf1_A 5 QVKTLQEKAGKGAGTVVAVIDAGFDKNHEAWRLT-------DKTKARYQSKEDLEKAKKEHGITYGEWVNDKVAYYHDYS 77 (926)
T ss_dssp CCHHHHHHHCSCTTCEEEEEESCCTTCCCCCSCC-------SCCCSSCCHHHHHHHHHHTTTCCCCBCCSSSCCEEEESC
T ss_pred ccHHHHhccCCCCCcEEEEEecCCCCCCHhHcCC-------CCCcccccchhhhcccccccCcccccccCcccceeeccc
Confidence 5677999999999999999999999999999843 3577777543222 11158999999999886
Q ss_pred cccccccCCCCCCCCCCCCCCCCCCCCchhhhhhhccccccCCcccccCCcceeeecCCCeEEEEEeeeCCCCCCCCCHH
Q 003970 194 KGFEEEYGPLNASTNREYRSARDFLGHGTHTASTAAGSIAKNAGFFGLGRGIARGGAPRARLAVYKICWGKDSDGKCTEA 273 (782)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~D~~gHGTHVAgiaag~~~~~~~~~G~~~g~~~GVAP~A~l~~~kv~~~~~~~~~~~~~ 273 (782)
++. ...|..||||||||||||+...+.+. .+.+.||||+|+|++||+|++.+. .+..+
T Consensus 78 ~~~----------------~~~D~~gHGThVAgiiAg~~~~~~~~----~~~~~GvAP~A~l~~~kv~~~~g~--~~~~~ 135 (926)
T 1xf1_A 78 KDG----------------KTAVDQEHGTHVSGILSGNAPSETKE----PYRLEGAMPEAQLLLMRVEIVNGL--ADYAR 135 (926)
T ss_dssp CCS----------------CCCCSSTTTTHHHHSSCCCCCCCCSC----SCCTTTTCTTSEEEEEECCCCSCH--HHHHH
T ss_pred cCC----------------CCCCCCCcHHHHHHHHhCCCccCccc----CCceEEECCCCEEEEEEeecCCCC--CCcHH
Confidence 531 12288999999999999987554332 245799999999999999987642 25667
Q ss_pred HHHHHHHHHhhcCCcEEEecccCCCCCCCCccChHHHHHHhhhccCceEEEecCCCCCC-------------CCCcccC-
Q 003970 274 DILAAFDDALHDGVDVISASFGESPPLRPFFASNADIGSFNAMQHGVTVVFSGGNDGPE-------------PSLVQNV- 339 (782)
Q Consensus 274 ~i~~ai~~a~~~gvdVIn~SlG~~~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~G~~-------------~~~~~~~- 339 (782)
++++||+||+++|+||||||||..........+.+..++.+|.++|++||+||||+|+. ..++.++
T Consensus 136 ~i~~Ai~~Ai~~gvdVIn~SlG~~~~~~~~~~~~~~~ai~~A~~~GilvV~AAGN~G~~g~~~~~~~~~~p~~~tv~~PA 215 (926)
T 1xf1_A 136 NYAQAIRDAINLGAKVINMSFGNAALAYANLPDETKKAFDYAKSKGVSIVTSAGNDSSFGGKTRLPLADHPDYGVVGTPA 215 (926)
T ss_dssp HHHHHHHHHHHTTCEEEEECCSSCCCTTCCCCHHHHHHHHHHHHTTCEEEEECCSCCBTTCTTSCCBTTCCCCBCCCSCT
T ss_pred HHHHHHHHHHHhCCcEEEECCCCCCCCccccccHHHHHHHHHHhCCcEEEEeCCCCCCcCCccccccccCCCcceecCcc
Confidence 89999999999999999999998742123455678888999999999999999999962 3445555
Q ss_pred -CCceEEecccccCcccceeEEe-CCccEEEeeeeec-----ccceeeEEEccccccCCccccCCCCCCCCCceEEEEee
Q 003970 340 -APWSICVAASSIDRTFPTEIVV-NSDFSIVGESFIS-----TEVKAKLVEAFTYFADGICKCENWMGRKATGRVVLCFS 412 (782)
Q Consensus 340 -ap~vitVgAs~~d~~~~~~~~~-~~~~~~~g~~~~~-----~~~~~~lv~~~~~~~~~~c~~~~~~~~~~~gkiv~~~~ 412 (782)
+||+|+|||++.++.+...+.+ +++....+.++.. ....+|+++.+. .|.+..+ .+++|||++|+|
T Consensus 216 ~~~~vitVgA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~~~~-----g~~~~~~--~~v~Gkivl~~r 288 (926)
T 1xf1_A 216 AADSTLTVASYSPDKQLTETVRVKTADQQDKEMPVLSTNRFEPNKAYDYAYANR-----GTKEDDF--KDVKGKIALIER 288 (926)
T ss_dssp TTCCSEEEEEEBCSEEEEEEEEEECTTSCEEEEEEEEESCCCTTCCEEEEECTT-----SCSTTTT--TTCTTSEEEEEC
T ss_pred cCCceEEEeccccccccccceEEEcCCCcceeeEEEecCCCCCCceEEEEECCC-----CCCccch--hhcCCeEEEEEC
Confidence 7999999999999999988887 5655554444432 122388998764 4776655 689999999999
Q ss_pred CCCCccHHHHHHHHHHcCceEEEEecCCC----ccccccccccEEEEehhhHHHHHHHHhcCCCCcEEEEccCccccCCC
Q 003970 413 TMGSVKTEEAEAAAKKANASGLIFAEPMT----ELIAEVDIIPTVRIDIAQGTQLRDYLAQFPRLPIVQLKPSKTSIGKV 488 (782)
Q Consensus 413 g~~~~~~~~k~~~~~~~Ga~g~i~~n~~~----~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~~i~~~~~~~~~~ 488 (782)
+.|. +.+|..+++++||+++|++|+.. .......++|+.+++..++..|+. ....++++..........
T Consensus 289 g~~~--~~~k~~~~~~~Ga~gvi~~n~~~~~~~~~~~~~~~iP~~~i~~~~g~~l~~-----~~~~ti~~~~~~~~~~~~ 361 (926)
T 1xf1_A 289 GDID--FKDKIAKAKKAGAVGVLIYDNQDKGFPIELPNVDQMPAAFISRKDGLLLKD-----NPQKTITFNATPKVLPTA 361 (926)
T ss_dssp CSSC--HHHHHHHHHHTTCSEEEEECSSTTCCCEECCCSTTCCEEEECHHHHHHHHH-----CSSCEEEECSSCEEEECS
T ss_pred CCCC--HHHHHHHHHhCCCcEEEEEecCCCCcccccCccccccEEEEeHHHHHHHHh-----CCceEEEecccceecccC
Confidence 9875 99999999999999999999864 123456799999999999988774 223344444333334455
Q ss_pred CCCccccccCCCCCCCCCCCcccceeecCceEEeecCCCCCCCCCCCCCCccceeeeccccchhhHHHHHHHHHHH----
Q 003970 489 PAPTVAYFSSRGPSSISPDILKPDITAPGIGVLAAWPPNTPPTLLPSDGRSVKWNFQSGTSMSCPHVSGVVALIKS---- 564 (782)
Q Consensus 489 ~~~~~a~fSS~Gp~~~~~~~~KPDI~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q---- 564 (782)
..+.++.||||||+. ++++||||+|||++|+++++++ .|..+||||||||||||++|||+|
T Consensus 362 ~~~~~a~FSSrGp~~--~~~lKPDI~APG~~I~sa~~~~-------------~y~~~SGTSMAaPhVAG~aALl~q~~k~ 426 (926)
T 1xf1_A 362 SGTKLSRFSSWGLTA--DGNIKPDIAAPGQDILSSVANN-------------KYAKLSGTSMSAPLVAGIMGLLQKQYET 426 (926)
T ss_dssp SCSBCCTTSCCCBCT--TSCBSCCEEEECCCEEESSSCS-------------SSCEEESCTTHHHHHHHHHHHHHHHHHH
T ss_pred CcceeccccCCCCCC--CCccCceEECCCCCEEeeccCC-------------cceecCccchhHHHHHHHHHHHHHHHhc
Confidence 678999999999994 8999999999999999999875 899999999999999999999964
Q ss_pred hCCCCCHHH----HHHHHHhccccCCCCCCccccCCCCCcCCCCCccccccCccccCCCceeecCCchhhHhhhhccCCC
Q 003970 565 AHPNWSPAA----IRSALMTTAYTRDTSHDSILAGGSMKVSDPFDIGAGHINPMKAMDPGLIYDLKPTDYIVFLRNIGYT 640 (782)
Q Consensus 565 ~~P~lsp~~----Ik~~L~~TA~~~~~~g~~~~~~~~~~~~~~~~~G~G~vn~~~Al~~glv~d~~~~~~~~~~~~~~~~ 640 (782)
.||+|+|+| ||++||+||++++..+ ....+++++||+|+||+.+|++|.+ |+|..+++
T Consensus 427 ~~P~~sp~~~~~~Iks~L~~TA~~~~~~~-------~~~~~~~~~~G~G~vn~~~A~~~~~-----------~l~~~~~~ 488 (926)
T 1xf1_A 427 QYPDMTPSERLDLAKKVLMSSATALYDED-------EKAYFSPRQQGAGAVDAKKASAATM-----------YVTDKDNT 488 (926)
T ss_dssp SSSSSHHHHHHHHHHHHHHHHSBCCEEGG-------GTEECCHHHHTTCBCCHHHHHHCSE-----------EEEESSSS
T ss_pred cCCCCCHHHHHHHHHHHHHhcCCCcccCC-------CCccCChhccCCCccCHHHhcCCCe-----------EEEcCCCC
Confidence 599999997 9999999999875431 1224578899999999999999854 56766542
Q ss_pred ccceeeecCCCCCCCCCccCCCCCCCCCCCCCcCeEEEeecCceEEEEEEEEecCCC-CCeEEEEEEeC--CCccEEEEE
Q 003970 641 QDQINKIFLPSPDETERTSCPQAHKIPNSFINYPSITVSNLQSTMTIKRTVKNVGQK-KNAIYFASVVK--PGGVEVVVW 717 (782)
Q Consensus 641 ~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~ln~ps~~~~~~~~~~~~~rtvtnv~~~-~~~ty~~~~~~--p~g~~v~v~ 717 (782)
.. +|.+.++..+.+++|||||+|.. ...+|++++.. |.+..++|+
T Consensus 489 ~~--------------------------------~i~l~~~~~~~~~~~tv~N~g~~~~~~~y~~~v~~~~~~~~~~~v~ 536 (926)
T 1xf1_A 489 SS--------------------------------KVHLNNVSDKFEVTVNVHNKSDKPQELYYQATVQTDKVDGKHFALA 536 (926)
T ss_dssp CS--------------------------------CEEEEEECSEEEEEEEEEECSSSCEEEEEEEEEEEEEEETTEEEEE
T ss_pred cc--------------------------------eeeccccCccEEEEEEEEEeCCCceeEEEEEEEEeccCCCceEEec
Confidence 21 34455555678999999999974 14678887765 778899999
Q ss_pred cceeEeccC-------CeEEEEEEEEEecc--------cCCCceEEEEEEEE--cCceE-EEeEEEEEEcCC
Q 003970 718 PRVLVFSWF-------KEEVSYYVSLKPLK--------MSQGRFDFGQIVWS--DGFHY-VRSPLVVFVNNT 771 (782)
Q Consensus 718 p~~~~~~~~-------g~~~~~~v~~~~~~--------~~~~~~~~G~~~~~--~~~~~-v~~P~~~~~~~~ 771 (782)
|..|.|... ||+++|+|+|+... ++++.|+||+|+|+ ++.|. ||+||+++..+-
T Consensus 537 p~~l~~~~~~~vtv~ag~~~~~~vt~~~~~~~~~~~~~~~~~~~~~G~i~~~~~~~~~~~v~~P~~~~~g~~ 608 (926)
T 1xf1_A 537 PKVLYETSWQKITIPANSSKQVTVPIDASRFSKDLLAQMKNGYFLEGFVRFKQDPTKEELMSIPYIGFRGDF 608 (926)
T ss_dssp EEEEEECCCEEEEECTTEEEEEEEEEECHHHHHHHHHHSTTCEEEEEEEEEESSTTSCCCEEEEEEEEESCG
T ss_pred cceeEeccCCeEEECCCCEEEEEEEEEcCccchhhcccccCCcEEEEEEEEEeCCCCCCEEEeeeEEEecCc
Confidence 987766544 99999999999741 34667899999999 56564 999999999875
No 4
>3afg_A Subtilisin-like serine protease; propeptide, thermococcus kodakaraensis, hydrolas protease; 2.00A {Thermococcus kodakarensis}
Probab=100.00 E-value=4.3e-60 Score=543.50 Aligned_cols=365 Identities=30% Similarity=0.411 Sum_probs=288.0
Q ss_pred CCceEEEEeCCCCCCCCchhhHHHHHHHHHHhCCchhhccceEEEeeeeeeeEEEEeCHHHHHHH-----------hcCc
Q 003970 26 ASHVYIVYLGHNRHCDPNLISKSHLQLLSSVFASEEDAKRSLLYGYKYSFSGFSAKLNSSQAASL-----------AEME 94 (782)
Q Consensus 26 ~~~~yIV~l~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~i~~~y~~~~ng~s~~l~~~~~~~L-----------~~~p 94 (782)
.+..|||.|++.. ..+...++++.+ ..++.++|+ .|+||+++++.+++++| +++|
T Consensus 34 ~~~~~iV~~~~~~------~~~~~~~~~~~~-------g~~v~~~~~-~~~g~~~~l~~~~~~~l~~~~~~~~~~~~~~~ 99 (539)
T 3afg_A 34 QEVSTIIMFDNQA------DKEKAVEILDFL-------GAKIKYNYH-IIPALAVKIKVKDLLIIAGLMDTGYFGNAQLS 99 (539)
T ss_dssp CEEEEEEEESSHH------HHHHHHHHHHHH-------TCEEEEECS-SSSEEEEEEEHHHHHHHTTCSCCC---CCCCT
T ss_pred CceEEEEEECCCC------CHHHHHHHHHhc-------CCeEEEEee-eeeEEEEEeCHHHHHHHHhhccccccccccCC
Confidence 3457999999742 122223344433 245889997 79999999999999999 8899
Q ss_pred CeEEEEecceeeccccccccccccc---ccCCCCccCCCCCCCCCcEEEEeccccCCCCCCCCCCCCCCCCCCCccceee
Q 003970 95 EVISIFESQVLKLHTTRSWDFMGLI---LDNTGEVTPVQLAYGDDIVVGIFDTGVWPESESFQEEPSMSPIPSSWKGTCV 171 (782)
Q Consensus 95 ~V~~V~~~~~~~~~~~~s~~~~gl~---~~~~~~~~~~~~~~G~gV~VgVIDtGId~~Hp~f~d~~~~~~~~~~~~g~~~ 171 (782)
+|++|++++.+++.... .++. ..+++..+|..+++|+||+|||||||||++||+|.+
T Consensus 100 ~V~~v~~d~~~~~~~~~----~~~~~~~~~~~~~~~~~~g~~G~gv~VaViDtGid~~Hpdl~~---------------- 159 (539)
T 3afg_A 100 GVQFIQEDYVVKVAVET----EGLDESAAQVMATNMWNLGYDGSGITIGIIDTGIDASHPDLQG---------------- 159 (539)
T ss_dssp TEEEEEECCEEECC---------------CCBCSCCBCCSCCCTTCEEEEEESBCCTTSGGGTT----------------
T ss_pred CeeEEEecccccccCcc----ccCCccccccCcHhHHhcCCCCCCcEEEEEecCCCCCChHHhC----------------
Confidence 99999999998875422 1111 112567899999999999999999999999999952
Q ss_pred ccCcCCCCcccCcceeeeEecccccccccCCCCCCCCCCCCCCCCCCCCchhhhhhhccccccCCcccccCCcceeeecC
Q 003970 172 RGEKFDPQKACNRKLIGARYYVKGFEEEYGPLNASTNREYRSARDFLGHGTHTASTAAGSIAKNAGFFGLGRGIARGGAP 251 (782)
Q Consensus 172 ~g~~f~~~~~~n~kiig~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~gHGTHVAgiaag~~~~~~~~~G~~~g~~~GVAP 251 (782)
++++.++|..+ ...+.|++||||||||||||+.... .+.+.||||
T Consensus 160 -------------~i~~~~d~~~~---------------~~~~~D~~gHGThVAgiiag~~~~~-------~g~~~GvAp 204 (539)
T 3afg_A 160 -------------KVIGWVDFVNG---------------KTTPYDDNGHGTHVASIAAGTGAAS-------NGKYKGMAP 204 (539)
T ss_dssp -------------TEEEEEETTTC---------------CSSCCBSSSHHHHHHHHHHCCCGGG-------TTTTCCSCT
T ss_pred -------------CEeeeEECCCC---------------CCCCCCCCCCHHHHHHHHhCcCccC-------CCCEEEECC
Confidence 34555555432 1256789999999999999975321 234689999
Q ss_pred CCeEEEEEeeeCCCCCCCCCHHHHHHHHHHHhhc----CCcEEEecccCCCCCCCCccChHHHHHHhhhccCceEEEecC
Q 003970 252 RARLAVYKICWGKDSDGKCTEADILAAFDDALHD----GVDVISASFGESPPLRPFFASNADIGSFNAMQHGVTVVFSGG 327 (782)
Q Consensus 252 ~A~l~~~kv~~~~~~~~~~~~~~i~~ai~~a~~~----gvdVIn~SlG~~~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAG 327 (782)
+|+|+++|++++.+ .+..+++++||+||+++ |++|||||||... .....+.+..++.++.++|++||+|||
T Consensus 205 ~A~l~~~kv~~~~g---~~~~~~i~~ai~~a~~~~~~~g~~Vin~SlG~~~--~~~~~~~l~~ai~~a~~~GvlvV~AAG 279 (539)
T 3afg_A 205 GAKLVGIKVLNGQG---SGSISDIINGVDWAVQNKDKYGIKVINLSLGSSQ--SSDGTDSLSQAVNNAWDAGLVVVVAAG 279 (539)
T ss_dssp TCEEEEEECSCTTS---EEEHHHHHHHHHHHHHTHHHHTEEEEEECCCCCS--CCCSCSHHHHHHHHHHHTTCEEEEECC
T ss_pred CCEEEEEEeecCCC---CcCHHHHHHHHHHHHhhhhhcCCcEEEeCCCCCC--CCccchHHHHHHHHHHhcCCEEEEECC
Confidence 99999999998776 57889999999999975 9999999999875 334567888899999999999999999
Q ss_pred CCCCCCCCccc--CCCceEEecccccCcccceeEEeCCccEEEeeeeecccceeeEEEccccccCCccccCCCCCCCCCc
Q 003970 328 NDGPEPSLVQN--VAPWSICVAASSIDRTFPTEIVVNSDFSIVGESFISTEVKAKLVEAFTYFADGICKCENWMGRKATG 405 (782)
Q Consensus 328 N~G~~~~~~~~--~ap~vitVgAs~~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~lv~~~~~~~~~~c~~~~~~~~~~~g 405 (782)
|+|+...++.. ..+++|+|||++.
T Consensus 280 N~g~~~~~~~~Pa~~~~vitVgA~~~------------------------------------------------------ 305 (539)
T 3afg_A 280 NSGPNKYTVGSPAAASKVITVGAVDK------------------------------------------------------ 305 (539)
T ss_dssp SCCSSSSCCCTTTTCSSSEEEEEECT------------------------------------------------------
T ss_pred CCCCCCCcccCCccCCceEEEeeecC------------------------------------------------------
Confidence 99986555443 4689999998531
Q ss_pred eEEEEeeCCCCccHHHHHHHHHHcCceEEEEecCCCccccccccccEEEEehhhHHHHHHHHhcCCCCcEEEEccCcccc
Q 003970 406 RVVLCFSTMGSVKTEEAEAAAKKANASGLIFAEPMTELIAEVDIIPTVRIDIAQGTQLRDYLAQFPRLPIVQLKPSKTSI 485 (782)
Q Consensus 406 kiv~~~~g~~~~~~~~k~~~~~~~Ga~g~i~~n~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~~i~~~~~~~ 485 (782)
T Consensus 306 -------------------------------------------------------------------------------- 305 (539)
T 3afg_A 306 -------------------------------------------------------------------------------- 305 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCCCCccccccCCCCCCCCCCCcccceeecCceEEeecCCCCCCCCCCCCCCccceeeeccccchhhHHHHHHHHHHHh
Q 003970 486 GKVPAPTVAYFSSRGPSSISPDILKPDITAPGIGVLAAWPPNTPPTLLPSDGRSVKWNFQSGTSMSCPHVSGVVALIKSA 565 (782)
Q Consensus 486 ~~~~~~~~a~fSS~Gp~~~~~~~~KPDI~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~ 565 (782)
.+.+++||||||+. ++++||||+|||++|+++++...... +.....|..++|||||||||||++|||+|+
T Consensus 306 ----~~~~a~fSs~Gp~~--~~~~kpdi~APG~~I~s~~~~~~~~~----~~~~~~y~~~sGTSmAaP~VAG~aALl~~~ 375 (539)
T 3afg_A 306 ----YDVITDFSSRGPTA--DNRLKPEVVAPGNWIIAARASGTSMG----QPINDYYTAAPGTAMATPHVAGIAALLLQA 375 (539)
T ss_dssp ----TSCBCSSSCCCCCT--TCBCCCSEEEECSSEEEECCTTCCCS----EECSSSEEEECSHHHHHHHHHHHHHHHHHH
T ss_pred ----CcccccccCCCCCC--CCCCcccEecCcCCEEeeccCCCCCC----CCCcccccccCchHHHHHHHHHHHHHHHHH
Confidence 23578999999995 79999999999999999997642111 111226999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHhccccCCCCCCccccCCCCCcCCCCCccccccCccccCCC
Q 003970 566 HPNWSPAAIRSALMTTAYTRDTSHDSILAGGSMKVSDPFDIGAGHINPMKAMDP 619 (782)
Q Consensus 566 ~P~lsp~~Ik~~L~~TA~~~~~~g~~~~~~~~~~~~~~~~~G~G~vn~~~Al~~ 619 (782)
||+|+|++||++|++||+++...+ .++..||+|+||+.+|++.
T Consensus 376 ~p~~s~~~vk~~L~~tA~~~~~~~-----------~~~~~~G~G~vn~~~Al~~ 418 (539)
T 3afg_A 376 HPSWTPDKVKTALIETADIVKPDE-----------IADIAYGAGRVNAYKAAYY 418 (539)
T ss_dssp CTTCCHHHHHHHHHHHSBCSSGGG-----------CSBTTTBTCBCCHHHHHTG
T ss_pred CCCCCHHHHHHHHHhhCccCCCCC-----------CCccCccCCccCHHHHhhh
Confidence 999999999999999999765321 2456899999999999985
No 5
>2z2z_A TK-subtilisin precursor; thermococcus kodakaraensis, hydrolase; 1.87A {Thermococcus kodakarensis} PDB: 2e1p_A 2zwp_A 2zwo_A
Probab=100.00 E-value=9.4e-58 Score=507.76 Aligned_cols=345 Identities=24% Similarity=0.303 Sum_probs=275.3
Q ss_pred CceEEEEeCCCCCCCCchhhHHHHHHHHHHhCCchhhccceEEEeeeeeeeEEEEeCHHHHHHHhcCcCeEEEEecceee
Q 003970 27 SHVYIVYLGHNRHCDPNLISKSHLQLLSSVFASEEDAKRSLLYGYKYSFSGFSAKLNSSQAASLAEMEEVISIFESQVLK 106 (782)
Q Consensus 27 ~~~yIV~l~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~i~~~y~~~~ng~s~~l~~~~~~~L~~~p~V~~V~~~~~~~ 106 (782)
+.+|||+|++... ..+++++. ..++.++|. .+++|+++++++++++|+++|+|++|++++.++
T Consensus 2 ~~~~iV~~~~~~~---------~~~~~~~~-------g~~v~~~~~-~~~~~~~~~~~~~~~~L~~~p~V~~v~~~~~~~ 64 (395)
T 2z2z_A 2 TIRVIVSVDKAKF---------NPHEVLGI-------GGHIVYQFK-LIPAVVVDVPANAVGKLKKMPGVEKVEFDHQAV 64 (395)
T ss_dssp EEEEEEEECTTTC---------CHHHHHHT-------TCEEEEECS-SSSEEEEEEEGGGHHHHHTSTTEEEEEECCEEE
T ss_pred cEEEEEEECCCcc---------HHHHHHHc-------CCEEEEEec-cCCEEEEEECHHHHHHHHcCCCceEEEEeeeec
Confidence 4689999998621 12233332 245889998 599999999999999999999999999999987
Q ss_pred ccccccc-----------ccccccccCCCCccCCCCCCCCC--cEEEEeccccCCCCCCCCCCCCCCCCCCCccceeecc
Q 003970 107 LHTTRSW-----------DFMGLILDNTGEVTPVQLAYGDD--IVVGIFDTGVWPESESFQEEPSMSPIPSSWKGTCVRG 173 (782)
Q Consensus 107 ~~~~~s~-----------~~~gl~~~~~~~~~~~~~~~G~g--V~VgVIDtGId~~Hp~f~d~~~~~~~~~~~~g~~~~g 173 (782)
++....+ ..+++... +++.+|..+ +|+| |+|||||||||++||+|.+.
T Consensus 65 ~~~~~~~~~~~~~~~~~~~~w~~~~i-~~~~~w~~~-~G~g~~v~VaViDtGid~~Hp~l~~~----------------- 125 (395)
T 2z2z_A 65 LLGKPSWLGGGSTQPAQTIPWGIERV-KAPSVWSIT-DGSVSVIQVAVLDTGVDYDHPDLAAN----------------- 125 (395)
T ss_dssp ECCEECC------CCSCCCCHHHHHT-TCGGGGGTC-SSCCTTCEEEEEESCBCTTCTTTGGG-----------------
T ss_pred ccCCCCcccccccCccccCCcchhhc-CHHHHHhhc-CCCCCcEEEEEEcCCCCCCChhHhhc-----------------
Confidence 6542211 12244433 678899988 9999 99999999999999999642
Q ss_pred CcCCCCcccCcceeeeEecccccccccCCCCCCCCCCCCCCCCCCCCchhhhhhhccccccCCcccccCCcceeeecCCC
Q 003970 174 EKFDPQKACNRKLIGARYYVKGFEEEYGPLNASTNREYRSARDFLGHGTHTASTAAGSIAKNAGFFGLGRGIARGGAPRA 253 (782)
Q Consensus 174 ~~f~~~~~~n~kiig~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~gHGTHVAgiaag~~~~~~~~~G~~~g~~~GVAP~A 253 (782)
++..+.|..+... .+..++.|..||||||||||+|.. ++ ..+.||||+|
T Consensus 126 ------------~~~~~~~~~~~~~----------~~~~~~~d~~gHGT~vAgiia~~~-n~--------~g~~GvAp~a 174 (395)
T 2z2z_A 126 ------------IAWCVSTLRGKVS----------TKLRDCADQNGHGTHVIGTIAALN-ND--------IGVVGVAPGV 174 (395)
T ss_dssp ------------EEEEEECGGGCCB----------CCHHHHBCSSSHHHHHHHHHHCCC-SS--------SSCCCSSTTC
T ss_pred ------------cccCccccCCccc----------CCCCCCCCCCCCHHHHHHHHHeec-CC--------CceEEECCCC
Confidence 2223333221100 001124678999999999999973 21 1258999999
Q ss_pred eEEEEEeeeCCCCCCCCCHHHHHHHHHHHhhc--------------------CCcEEEecccCCCCCCCCccChHHHHHH
Q 003970 254 RLAVYKICWGKDSDGKCTEADILAAFDDALHD--------------------GVDVISASFGESPPLRPFFASNADIGSF 313 (782)
Q Consensus 254 ~l~~~kv~~~~~~~~~~~~~~i~~ai~~a~~~--------------------gvdVIn~SlG~~~~~~~~~~~~~~~a~~ 313 (782)
+|+.+|++++.+ .+..+++++||+||+++ +++|||||||... ....+..++.
T Consensus 175 ~l~~~kv~~~~g---~~~~~~i~~ai~~a~~~~~~~~~~~~~~~~~~~~~~~~~~Vin~S~G~~~-----~~~~~~~ai~ 246 (395)
T 2z2z_A 175 QIYSVRVLDARG---SGSYSDIAIGIEQAILGPDGVADKDGDGIIAGDPDDDAAEVISMSLGGPA-----DDSYLYDMII 246 (395)
T ss_dssp EEEEEECSCTTS---EEEHHHHHHHHHHHHHTTTTCSSTTCSSCCTTCTTSCCCSEEEECEEBSC-----CCHHHHHHHH
T ss_pred EEEEEEEecCCC---CccHHHHHHHHHHHHhCccccccccccccccccccCCCCeEEEecCCCCC-----CCHHHHHHHH
Confidence 999999998776 57889999999999988 9999999999874 2346777788
Q ss_pred hhhccCceEEEecCCCCCCCCCcccCCCceEEecccccCcccceeEEeCCccEEEeeeeecccceeeEEEccccccCCcc
Q 003970 314 NAMQHGVTVVFSGGNDGPEPSLVQNVAPWSICVAASSIDRTFPTEIVVNSDFSIVGESFISTEVKAKLVEAFTYFADGIC 393 (782)
Q Consensus 314 ~a~~~Gi~vV~AAGN~G~~~~~~~~~ap~vitVgAs~~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~lv~~~~~~~~~~c 393 (782)
++.++|++||+||||+|......+...+++|+|||++.
T Consensus 247 ~a~~~gv~vV~AAGN~g~~~~~~Pa~~~~vi~Vga~~~------------------------------------------ 284 (395)
T 2z2z_A 247 QAYNAGIVIVAASGNEGAPSPSYPAAYPEVIAVGAIDS------------------------------------------ 284 (395)
T ss_dssp HHHHTTCEEEEECCSSCCSSCCBTTTSTTEEEEEEECT------------------------------------------
T ss_pred HHHHCCCEEEEECCCCCCCCCCCccCCCCEEEEEEecC------------------------------------------
Confidence 88999999999999999876667777899999999541
Q ss_pred ccCCCCCCCCCceEEEEeeCCCCccHHHHHHHHHHcCceEEEEecCCCccccccccccEEEEehhhHHHHHHHHhcCCCC
Q 003970 394 KCENWMGRKATGRVVLCFSTMGSVKTEEAEAAAKKANASGLIFAEPMTELIAEVDIIPTVRIDIAQGTQLRDYLAQFPRL 473 (782)
Q Consensus 394 ~~~~~~~~~~~gkiv~~~~g~~~~~~~~k~~~~~~~Ga~g~i~~n~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~ 473 (782)
T Consensus 285 -------------------------------------------------------------------------------- 284 (395)
T 2z2z_A 285 -------------------------------------------------------------------------------- 284 (395)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cEEEEccCccccCCCCCCccccccCCCCCCCCCCCcccceeecCceEEeecCCCCCCCCCCCCCCccceeeeccccchhh
Q 003970 474 PIVQLKPSKTSIGKVPAPTVAYFSSRGPSSISPDILKPDITAPGIGVLAAWPPNTPPTLLPSDGRSVKWNFQSGTSMSCP 553 (782)
Q Consensus 474 ~~~~i~~~~~~~~~~~~~~~a~fSS~Gp~~~~~~~~KPDI~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP 553 (782)
.+.+++||+||| +|+|||++|+++++.+ .|..++|||||||
T Consensus 285 ----------------~~~~a~fS~~G~----------~v~APG~~i~s~~~~~-------------~y~~~sGTS~AaP 325 (395)
T 2z2z_A 285 ----------------NDNIASFSNRQP----------EVSAPGVDILSTYPDD-------------SYETLMGTAMATP 325 (395)
T ss_dssp ----------------TSCBCTTSCSSC----------SEEEECSSEEEEETTT-------------EEEEEESHHHHHH
T ss_pred ----------------CCCCCcccCCCC----------CEEeCCCCeeeecCCC-------------ceEecCCHHHHHH
Confidence 345789999996 5799999999999875 8999999999999
Q ss_pred HHHHHHHHHHHhCC-------------CCCHHHHHHHHHhccccCCCCCCccccCCCCCcCCCCCccccccCccccCCC
Q 003970 554 HVSGVVALIKSAHP-------------NWSPAAIRSALMTTAYTRDTSHDSILAGGSMKVSDPFDIGAGHINPMKAMDP 619 (782)
Q Consensus 554 ~VAG~aALl~q~~P-------------~lsp~~Ik~~L~~TA~~~~~~g~~~~~~~~~~~~~~~~~G~G~vn~~~Al~~ 619 (782)
||||++|||+|++| .|++.+||++|++||+++... ..+..||||+||+.+|++.
T Consensus 326 ~VaG~aAll~~~~p~~~~~~~~~~~~~~ls~~~v~~~L~~tA~~~~~~------------g~~~~~G~G~vd~~~A~~~ 392 (395)
T 2z2z_A 326 HVSGVVALIQAAYYQKYGKILPVGTFDDISKNTVRGILHITADDLGPT------------GWDADYGYGVVRAALAVQA 392 (395)
T ss_dssp HHHHHHHHHHHHHHHHHSSCCCCCCTTCCSSSSHHHHHHHHSBCCSSS------------SSBTTTBTCBCCHHHHHHH
T ss_pred HHHHHHHHHHHhCccccccccccccccCCCHHHHHHHHHhhccccCCC------------CCCCCccCceeCHHHHHHH
Confidence 99999999999999 999999999999999976532 2456899999999999874
No 6
>3t41_A Epidermin leader peptide processing serine protea; structural genomics, center for structural genomics of infec diseases, csgid; 1.95A {Staphylococcus aureus} PDB: 3qfh_A
Probab=100.00 E-value=2.8e-55 Score=500.17 Aligned_cols=361 Identities=19% Similarity=0.226 Sum_probs=273.8
Q ss_pred CCceEEEEeCCCCCCCCchhhHHHHHHHHHHhCCchhhccceEEEeeeeeeeEEEEeCHHHHHHHhc-CcCeEEEEecce
Q 003970 26 ASHVYIVYLGHNRHCDPNLISKSHLQLLSSVFASEEDAKRSLLYGYKYSFSGFSAKLNSSQAASLAE-MEEVISIFESQV 104 (782)
Q Consensus 26 ~~~~yIV~l~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~i~~~y~~~~ng~s~~l~~~~~~~L~~-~p~V~~V~~~~~ 104 (782)
.++.|||++++. ....+++++. ..++.++|. .|++|+++++++++++|++ +|+|++|++++.
T Consensus 43 ~~~~yiv~~~~~---------~~~~~~~~~~-------g~~v~~~~~-~~~~~~~~~~~~~~~~L~~~~p~V~~v~~~~~ 105 (471)
T 3t41_A 43 EELYYSVEYKNT---------ATFNKLVKKK-------SLNVVYNIP-ELHVAQIKMTKMHANALANYKNDIKYINATCS 105 (471)
T ss_dssp CCEEEEEEESCH---------HHHHHHHHHH-------TCEEEEEEG-GGTEEEEEECHHHHHHHHTCTTTEEEEEECCS
T ss_pred CceEEEEEcCCH---------HHHHHHHHhC-------CCEEEEecC-CccEEEEEeCHHHHHHHHhcCCCCcEEEecce
Confidence 346899988763 1233333332 245778886 5999999999999999999 999999999998
Q ss_pred eeccccccc----------ccccccccCCCCccCCCCCCCCCcEEEEeccccCCCCCCCCCCCCCCCCCCCccceeeccC
Q 003970 105 LKLHTTRSW----------DFMGLILDNTGEVTPVQLAYGDDIVVGIFDTGVWPESESFQEEPSMSPIPSSWKGTCVRGE 174 (782)
Q Consensus 105 ~~~~~~~s~----------~~~gl~~~~~~~~~~~~~~~G~gV~VgVIDtGId~~Hp~f~d~~~~~~~~~~~~g~~~~g~ 174 (782)
+++...... ..+++........+|..+.+|+||+|||||||||++||+|.+.. |.+..
T Consensus 106 ~~~~~~~~~~~~~~~~~~~~~w~l~~i~~~~~~~~~~~~G~gv~VaViDtGid~~Hp~~~~~~--------~~~~~---- 173 (471)
T 3t41_A 106 TCITSEKTIDRTSNESLFSRQWDMNKITNNGASYDDLPKHANTKIAIIDTGVMKNHDDLKNNF--------STDSK---- 173 (471)
T ss_dssp SCBCCCCCCCC---CCSCCCCHHHHTTTTTTGGGGGCCSSCCCCEEEEESCCCTTCTTTTTTB--------CTTCE----
T ss_pred eccccccccccCCCCccccccccHhhccCcHHHHhccCCCCCcEEEEEeCCCCCCChhHhcCc--------ccCCc----
Confidence 877543221 11233333123468999999999999999999999999997542 11100
Q ss_pred cCCCCcccCcceeeeEecccccccccCCCCCCCCCCCCCCCCCCCCchhhhhhhccccccCCcccccCCcceeeecCCCe
Q 003970 175 KFDPQKACNRKLIGARYYVKGFEEEYGPLNASTNREYRSARDFLGHGTHTASTAAGSIAKNAGFFGLGRGIARGGAPRAR 254 (782)
Q Consensus 175 ~f~~~~~~n~kiig~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~gHGTHVAgiaag~~~~~~~~~G~~~g~~~GVAP~A~ 254 (782)
.++....|...... ...+...+.|..||||||||||+|+. .+.||||+|+
T Consensus 174 ----------~~~~~~~~~~~~~~--------~~~~~~~~~d~~gHGT~vAgiiaa~g------------~~~GvAp~a~ 223 (471)
T 3t41_A 174 ----------NLVPLNGFRGTEPE--------ETGDVHDVNDRKGHGTMVSGQTSANG------------KLIGVAPNNK 223 (471)
T ss_dssp ----------ECCCTTCGGGCCTT--------CCCCTTCCCCSSSHHHHHHHHHHCBS------------SSBCSSTTSC
T ss_pred ----------ccccCCCccCCCcc--------cCCCCCCCcCCCCccchhhheeecCC------------ceeEECCCCe
Confidence 01111111111000 01122356789999999999999863 2589999999
Q ss_pred EEEEEeeeCCCCCCCCCHHHHHHHHHHHhhcCCcEEEecccCCCC-----CCC------CccChHHHHHHhhhccCceEE
Q 003970 255 LAVYKICWGKDSDGKCTEADILAAFDDALHDGVDVISASFGESPP-----LRP------FFASNADIGSFNAMQHGVTVV 323 (782)
Q Consensus 255 l~~~kv~~~~~~~~~~~~~~i~~ai~~a~~~gvdVIn~SlG~~~~-----~~~------~~~~~~~~a~~~a~~~Gi~vV 323 (782)
|+.+|++++. .+..+++++||+||++++++|||||||.... ... ...+.+..++..+.++|++||
T Consensus 224 l~~~kv~~~~----~~~~~~i~~ai~~a~~~g~~Vin~S~G~~~~~~~~~~~~~~~~~~~~~~~~~~ai~~a~~~Gi~vV 299 (471)
T 3t41_A 224 FTMYRVFGSK----KTELLWVSKAIVQAANDGNQVINISVGSYIILDKNDHQTFRKDEKVEYDALQKAINYAKKKKSIVV 299 (471)
T ss_dssp EEEEECCSSS----CCCHHHHHHHHHHHHHTTCSEEEECCCEEEEECTTCCCSEESSCHHHHHHHHHHHHHHHHTTCEEE
T ss_pred EEEEEeccCC----CCcHHHHHHHHHHHHhCCCCEEEeCCCCCCCCccccccccccccchhHHHHHHHHHHHHhCCCEEE
Confidence 9999999874 4889999999999999999999999997410 000 123456778888889999999
Q ss_pred EecCCCCCCCCC------------------cccCCCceEEecccccCcccceeEEeCCccEEEeeeeecccceeeEEEcc
Q 003970 324 FSGGNDGPEPSL------------------VQNVAPWSICVAASSIDRTFPTEIVVNSDFSIVGESFISTEVKAKLVEAF 385 (782)
Q Consensus 324 ~AAGN~G~~~~~------------------~~~~ap~vitVgAs~~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~lv~~~ 385 (782)
+||||+|..... .+...+++|+|||++.
T Consensus 300 ~AAGN~g~~~~~~~~~~~~~~~~~~~~~~~~Pa~~~~vitVgA~~~---------------------------------- 345 (471)
T 3t41_A 300 AAAGNDGIDVNDKQKLKLQREYQGNGEVKDVPASMDNVVTVGSTDQ---------------------------------- 345 (471)
T ss_dssp EECCSSCCBTTCHHHHHHTTTCCSSSEEEEETTTSTTEEEEEEECT----------------------------------
T ss_pred EEcCCCCcCCCcccccccccccccCCceeeccccCCCeEEEEeeCC----------------------------------
Confidence 999999976432 3445789999998542
Q ss_pred ccccCCccccCCCCCCCCCceEEEEeeCCCCccHHHHHHHHHHcCceEEEEecCCCccccccccccEEEEehhhHHHHHH
Q 003970 386 TYFADGICKCENWMGRKATGRVVLCFSTMGSVKTEEAEAAAKKANASGLIFAEPMTELIAEVDIIPTVRIDIAQGTQLRD 465 (782)
Q Consensus 386 ~~~~~~~c~~~~~~~~~~~gkiv~~~~g~~~~~~~~k~~~~~~~Ga~g~i~~n~~~~~~~~~~~~p~~~i~~~~g~~l~~ 465 (782)
T Consensus 346 -------------------------------------------------------------------------------- 345 (471)
T 3t41_A 346 -------------------------------------------------------------------------------- 345 (471)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHhcCCCCcEEEEccCccccCCCCCCccccccCCCCCCCCCCCcccceeecCce----------------------EEee
Q 003970 466 YLAQFPRLPIVQLKPSKTSIGKVPAPTVAYFSSRGPSSISPDILKPDITAPGIG----------------------VLAA 523 (782)
Q Consensus 466 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSS~Gp~~~~~~~~KPDI~APG~~----------------------I~sa 523 (782)
.+.+++||++||+. |||+|||++ |+++
T Consensus 346 ------------------------~~~~a~fS~~G~~~-------~di~APG~~i~~~~~~g~~~~~~~~~~~~~~i~s~ 394 (471)
T 3t41_A 346 ------------------------KSNLSEFSNFGMNY-------TDIAAPGGSFAYLNQFGVDKWMNEGYMHKENILTT 394 (471)
T ss_dssp ------------------------TSSBCTTCCBCTTT-------CCEEEECCCCHHHHHHHHHHHHHTTTHHHHSEEEE
T ss_pred ------------------------CCCCCCccCCCCCC-------CeEEecCCCcccccccccccccccccccCceeEec
Confidence 34578999999974 799999987 9999
Q ss_pred cCCCCCCCCCCCCCCccceeeeccccchhhHHHHHHHHHHHhCC-CCCHHHHHHHHHhccccCCCCCCccccCCCCCcCC
Q 003970 524 WPPNTPPTLLPSDGRSVKWNFQSGTSMSCPHVSGVVALIKSAHP-NWSPAAIRSALMTTAYTRDTSHDSILAGGSMKVSD 602 (782)
Q Consensus 524 ~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~P-~lsp~~Ik~~L~~TA~~~~~~g~~~~~~~~~~~~~ 602 (782)
++.+ .|..++|||||||||||++|||+|++| .++|++||++|++||.+... .+
T Consensus 395 ~~~~-------------~~~~~sGTS~AaP~VAG~aAll~~~~p~~~~~~~v~~~L~~tA~~~~~-------------~~ 448 (471)
T 3t41_A 395 ANNG-------------RYIYQAGTALATPKVSGALALIIDKYHLEKHPDKAIELLYQHGTSKNN-------------KP 448 (471)
T ss_dssp CTTS-------------SEEEECSHHHHHHHHHHHHHHHHHHHTCTTCHHHHHHHHHHHSBCCSC-------------CC
T ss_pred CCCC-------------CEEeecchHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHhCCCCCC-------------CC
Confidence 8875 899999999999999999999999999 89999999999999986532 25
Q ss_pred CCCccccccCccccCCCc
Q 003970 603 PFDIGAGHINPMKAMDPG 620 (782)
Q Consensus 603 ~~~~G~G~vn~~~Al~~g 620 (782)
+..||||+||+.+|++..
T Consensus 449 ~~~~G~G~vd~~~Al~~a 466 (471)
T 3t41_A 449 FSRYGHGELDVYKALNVA 466 (471)
T ss_dssp HHHHTTCBBCHHHHTTTT
T ss_pred cCccccChhCHHHHHHHH
Confidence 568999999999999853
No 7
>1y9z_A Alkaline serine protease; subtilisin-like alpha/beta domain, insert beta barrel domain hydrolase; HET: PMS; 1.40A {Pseudoalteromonas SP} PDB: 1v6c_A* 1wvm_A*
Probab=100.00 E-value=7e-55 Score=491.56 Aligned_cols=378 Identities=21% Similarity=0.230 Sum_probs=278.1
Q ss_pred cccccCCCCccCCCCCCCCCcEEEEeccccCCCCCCCCCCCCCCCCCCCccceeeccCcCCCCcccCcceeeeEeccccc
Q 003970 117 GLILDNTGEVTPVQLAYGDDIVVGIFDTGVWPESESFQEEPSMSPIPSSWKGTCVRGEKFDPQKACNRKLIGARYYVKGF 196 (782)
Q Consensus 117 gl~~~~~~~~~~~~~~~G~gV~VgVIDtGId~~Hp~f~d~~~~~~~~~~~~g~~~~g~~f~~~~~~n~kiig~~~~~~~~ 196 (782)
++... +++.+|..+ |+||+|+|||||||++||+|.+.. | .+..++..
T Consensus 7 ~l~~i-~~~~~w~~~--g~gv~VaViDtGvd~~Hp~l~~~~--------~--------------------~~~~~~~~-- 53 (441)
T 1y9z_A 7 GQTFV-GATVLSDSQ--AGNRTICIIDSGYDRSHNDLNANN--------V--------------------TGTNNSGT-- 53 (441)
T ss_dssp HHHHT-TCSSSCCTT--GGGCEEEEEESCCCTTSTTTTTSE--------E--------------------EECCCTTS--
T ss_pred Chhhc-ChhhhhhcC--CCCcEEEEEcCCCCCCChhHhcCc--------c--------------------cCcccCCC--
Confidence 44443 678899865 779999999999999999996431 1 11111000
Q ss_pred ccccCCCCCCCCCCCCCCCCCCCCchhhhhhhccccccCCcccccCCcceeeecCCC--eEEEEEeeeCCCCCCCCCHHH
Q 003970 197 EEEYGPLNASTNREYRSARDFLGHGTHTASTAAGSIAKNAGFFGLGRGIARGGAPRA--RLAVYKICWGKDSDGKCTEAD 274 (782)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~D~~gHGTHVAgiaag~~~~~~~~~G~~~g~~~GVAP~A--~l~~~kv~~~~~~~~~~~~~~ 274 (782)
.+...+.|..||||||||||+|..+. ..+.||||+| +|+.+|+++..+ .+..++
T Consensus 54 ------------~~~~~~~d~~gHGT~vAgiia~~~~~---------~g~~GvAP~a~~~l~~~kv~~~~g---~~~~~~ 109 (441)
T 1y9z_A 54 ------------GNWYQPGNNNAHGTHVAGTIAAIANN---------EGVVGVMPNQNANIHIVKVFNEAG---WGYSSS 109 (441)
T ss_dssp ------------CCTTCCCSSCCHHHHHHHHHHCCCSS---------SBCCCSSCSSCSEEEEEECEETTE---ECCSSC
T ss_pred ------------CCCCCCCCCCCcHHHHHHHHhcccCC---------CCceEecCCCCCEEEEEEEeCCCC---CcCHHH
Confidence 01235678899999999999997521 1358999995 999999998765 477889
Q ss_pred HHHHHHHHhhc-CCcEEEecccCCCCCCCCccChHHHHHHhhhccCceEEEecCCCCCCCCCcccCCCceEEecccccCc
Q 003970 275 ILAAFDDALHD-GVDVISASFGESPPLRPFFASNADIGSFNAMQHGVTVVFSGGNDGPEPSLVQNVAPWSICVAASSIDR 353 (782)
Q Consensus 275 i~~ai~~a~~~-gvdVIn~SlG~~~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~G~~~~~~~~~ap~vitVgAs~~d~ 353 (782)
+++||+||+++ |+||||||||... ....+..++.+|.++|++||+||||+|......+...+++|+|||++.+.
T Consensus 110 ~~~ai~~a~~~~g~~Vin~S~G~~~-----~~~~~~~ai~~a~~~gv~vV~AAGN~g~~~~~~Pa~~~~vi~VgA~~~~~ 184 (441)
T 1y9z_A 110 LVAAIDTCVNSGGANVVTMSLGGSG-----STTTERNALNTHYNNGVLLIAAAGNAGDSSYSYPASYDSVMSVAAVDSNL 184 (441)
T ss_dssp HHHHHHHHHHTTCCSEEEECCCBSC-----CBHHHHHHHHHHHHTTCEEEEECCSSSSSBCCBTTTSTTEEEEEEECTTC
T ss_pred HHHHHHHHHHhcCCcEEEeCCCCCC-----CCHHHHHHHHHHHHCCCEEEEecCCCCCCCCCCCCCCCCeEEEEEECCCC
Confidence 99999999999 9999999999874 12356677888999999999999999987666777789999999998775
Q ss_pred ccceeEEe-------------------CCcc----EEEeeeeeccc-ce-ee-----EEEccc------cccCCccccC-
Q 003970 354 TFPTEIVV-------------------NSDF----SIVGESFISTE-VK-AK-----LVEAFT------YFADGICKCE- 396 (782)
Q Consensus 354 ~~~~~~~~-------------------~~~~----~~~g~~~~~~~-~~-~~-----lv~~~~------~~~~~~c~~~- 396 (782)
........ +++. .+.|.+++... ++ .+ +.+... ......|...
T Consensus 185 ~~~~~S~~g~~vdv~ApG~~i~s~~~~g~g~~~~~~~~G~s~~~~~~~p~~~~~~~~~~~~~~~~~g~~~~~~~~C~~~~ 264 (441)
T 1y9z_A 185 DHAAFSQYTDQVEISGPGEAILSTVTVGEGRLADITIGGQSYFSNGVVPHNRLTPSGTSYAPAPINASATGALAECTVNG 264 (441)
T ss_dssp CBCTTSCCCTTEEEEEECSSEEEECSTTCEEEEEEEETTEECGGGCCEECEEEEEETTEEEECCCCCEEEEEEEEEEEET
T ss_pred CCCccccCCCceEEEeccCCeeccccCCCcccceeecccccccccccCcccccccCCccccccccccccccchhcccccc
Confidence 43221111 1211 22233332111 00 00 111110 0122458754
Q ss_pred -CCCCCCCCceEEEEeeCCC---CccHHHHHHHHHHcCceEEEEecCCC--c-------cccccccccEEEEehhhHHHH
Q 003970 397 -NWMGRKATGRVVLCFSTMG---SVKTEEAEAAAKKANASGLIFAEPMT--E-------LIAEVDIIPTVRIDIAQGTQL 463 (782)
Q Consensus 397 -~~~~~~~~gkiv~~~~g~~---~~~~~~k~~~~~~~Ga~g~i~~n~~~--~-------~~~~~~~~p~~~i~~~~g~~l 463 (782)
.++..+++|||++|+|+.+ .+.+.+|..+++++||.++|++|+.. . .......+|.+.++..+|..|
T Consensus 265 ~~~~~~~~~gkivl~~rg~~~~~~~~~~~~~~~~~~aGa~gvii~~~~~~~g~~~~~~~~~~~~~~~p~~~v~~~~g~~l 344 (441)
T 1y9z_A 265 TSFSCGNMANKICLVERVGNQGSSYPEINSTKACKTAGAKGIIVYSNSALPGLQNPFLVDANSDITVPSVSVDRATGLAL 344 (441)
T ss_dssp TEEECCCCTTEEEEEECCSCSSSSCTHHHHHHHHHHTTCSEEEEECCTTSCSCCCCEEECTTCCCCSCEEEECHHHHHHH
T ss_pred ccccCCCccccEEEEeccccCcccccHHHHHHHHHhcCCeEEEEEeCCCccccccccccccccCccccEEEEeHHHHHHH
Confidence 5678899999999999976 25688999999999999999998864 1 123456899999999999999
Q ss_pred HHHHhcCCCCcEEEEccCccccCCCCCCccccccCCCCCCCCCCCcccceeecCceEEeecCCCCCCCCCCCCCCcccee
Q 003970 464 RDYLAQFPRLPIVQLKPSKTSIGKVPAPTVAYFSSRGPSSISPDILKPDITAPGIGVLAAWPPNTPPTLLPSDGRSVKWN 543 (782)
Q Consensus 464 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSS~Gp~~~~~~~~KPDI~APG~~I~sa~~~~~~~~~~~~~~~~~~y~ 543 (782)
++|+. .+ . .+ ++... ..|.
T Consensus 345 ~~~~~-~~----~-----------------------------------t~--------~~~~~-------------~~y~ 363 (441)
T 1y9z_A 345 KAKLG-QS----T-----------------------------------TV--------SNQGN-------------QDYE 363 (441)
T ss_dssp HTTTT-SE----E-----------------------------------EE--------EEEEE-------------ESEE
T ss_pred HHHhc-CC----c-----------------------------------cc--------ccccC-------------CCce
Confidence 88776 10 0 11 11111 2899
Q ss_pred eeccccchhhHHHHHHHHHHHhCCCCCHHHHHHHHHhccccCCCCCCccccCCCCCcCCCCCccccccCccccCCCceee
Q 003970 544 FQSGTSMSCPHVSGVVALIKSAHPNWSPAAIRSALMTTAYTRDTSHDSILAGGSMKVSDPFDIGAGHINPMKAMDPGLIY 623 (782)
Q Consensus 544 ~~sGTSmAaP~VAG~aALl~q~~P~lsp~~Ik~~L~~TA~~~~~~g~~~~~~~~~~~~~~~~~G~G~vn~~~Al~~glv~ 623 (782)
.+||||||||||||++|||+|+||+|+|++||++||+||++++..+ .+.+||+|+||+.+|+
T Consensus 364 ~~sGTSmAaP~VAG~aALl~~~~p~~sp~~ik~~L~~TA~~~~~~g------------~~~~~G~G~vn~~~A~------ 425 (441)
T 1y9z_A 364 YYNGTSMATPHVSGVATLVWSYHPECSASQVRAALNATADDLSVAG------------RDNQTGYGMINAVAAK------ 425 (441)
T ss_dssp EECSHHHHHHHHHHHHHHHHHHCTTSCHHHHHHHHHHHSBCCSSSS------------CBTTTBTCBCCHHHHH------
T ss_pred eecccccCCcccchHHHHHHHHCCCCCHHHHHHHHHhhchhhccCC------------CcccccccccCHHHHH------
Confidence 9999999999999999999999999999999999999999876533 3457999999999995
Q ss_pred cCCchhhHhhhhccCCC
Q 003970 624 DLKPTDYIVFLRNIGYT 640 (782)
Q Consensus 624 d~~~~~~~~~~~~~~~~ 640 (782)
||+.|+|+++++
T Consensus 426 -----~~~~~lc~~~~~ 437 (441)
T 1y9z_A 426 -----AYLDESCTGPTD 437 (441)
T ss_dssp -----HHHHHCTTCC--
T ss_pred -----HHHHhhhcCCCC
Confidence 689999998853
No 8
>2p4e_P Proprotein convertase subtilisin/kexin type 9; protease, LDL receptor, LDL, endocytosis, hydrol; 1.98A {Homo sapiens}
Probab=100.00 E-value=3.7e-56 Score=512.85 Aligned_cols=339 Identities=21% Similarity=0.214 Sum_probs=54.7
Q ss_pred eEEEEeCCCCCCCCchhhHHHHHHHHHHhCCchhhccceEEEeeeeeeeEEEEeCHHHHHHHhcCcCeEEEEecceeecc
Q 003970 29 VYIVYLGHNRHCDPNLISKSHLQLLSSVFASEEDAKRSLLYGYKYSFSGFSAKLNSSQAASLAEMEEVISIFESQVLKLH 108 (782)
Q Consensus 29 ~yIV~l~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~i~~~y~~~~ng~s~~l~~~~~~~L~~~p~V~~V~~~~~~~~~ 108 (782)
+|||+||+... ....+.+.+.+....... ....++.+.|++.|+||+++++++++++|+++|+|++|++++.++..
T Consensus 77 ~YIV~lk~~~~---~~~~~~~~~~l~a~~~~~-g~~~~v~~~y~~~~~Gfsv~l~~~~l~~L~~~P~V~~Vepd~~v~~~ 152 (692)
T 2p4e_P 77 TYVVVLKEETH---LSQSERTARRLQAQAARR-GYLTKILHVFHGLLPGFLVKMSGDLLELALKLPHVDYIEEDSSVFAQ 152 (692)
T ss_dssp EEEEEECTTCC---HHHHHHHHHHHHHHHHHT-TCCCEEEEEECSSSCEEEEECCGGGHHHHHTSTTEEEEEEEEEEEEC
T ss_pred cEEEEECCCCC---HHHHHHHHHHHHHHHhhc-ccccceeeEeeccccEEEEEeCHHHHHHHHcCCCceEEEeccccccC
Confidence 89999998642 222223333333322110 11246899999999999999999999999999999999999988652
Q ss_pred cccccccccccccCCCCccCCCCCCCCCcEEEEeccccCCCCCCCCCCCCCCCCCCCccceeeccCcCCCCcccCcceee
Q 003970 109 TTRSWDFMGLILDNTGEVTPVQLAYGDDIVVGIFDTGVWPESESFQEEPSMSPIPSSWKGTCVRGEKFDPQKACNRKLIG 188 (782)
Q Consensus 109 ~~~s~~~~gl~~~~~~~~~~~~~~~G~gV~VgVIDtGId~~Hp~f~d~~~~~~~~~~~~g~~~~g~~f~~~~~~n~kiig 188 (782)
...|.+..+.........|..+.+|+||+|+|||||||++||+|.+.. .|. +|+.
T Consensus 153 -~~pWgL~~i~~~~~~~~~w~~~~~G~GV~VaVIDTGId~~HpdL~gr~-------~~~-------~~~~---------- 207 (692)
T 2p4e_P 153 -SIPWNLERITPPRYRADEYQPPDGGSLVEVYLLDTSIQSDHREIEGRV-------MVT-------DFEN---------- 207 (692)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred -CCCcchhhcccccccccccccCCCCCCcEEEEEcCCCCCCChhhcCce-------Eec-------cccc----------
Confidence 234543333221112237888889999999999999999999997542 010 0110
Q ss_pred eEecccccccccCCCCCCCCCCCCCCCCCCCCchhhhhhhccccccCCcccccCCcceeeecCCCeEEEEEeeeCCCCCC
Q 003970 189 ARYYVKGFEEEYGPLNASTNREYRSARDFLGHGTHTASTAAGSIAKNAGFFGLGRGIARGGAPRARLAVYKICWGKDSDG 268 (782)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~gHGTHVAgiaag~~~~~~~~~G~~~g~~~GVAP~A~l~~~kv~~~~~~~~ 268 (782)
+.+.. + ......+.|.+||||||||||+|+. .||||+|+|+++|++++.+
T Consensus 208 ---~~d~d----g------~~~~~~~~D~~GHGTHVAGiIAg~~--------------~GVAP~A~L~~vKVl~~~G--- 257 (692)
T 2p4e_P 208 ---VPEED----G------TRFHRQASKCDSHGTHLAGVVSGRD--------------AGVAKGASMRSLRVLNCQG--- 257 (692)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ---ccCCC----C------CcccCCCCCCCCcHHHhhhHhhcCC--------------CccCCCCEEEEEEeecCCC---
Confidence 00000 0 0001246789999999999999873 6999999999999998776
Q ss_pred CCCHHHHHHHHHHHhhc------CCcEEEecccCCCCCCCCccChHHHHHHhhhccCceEEEecCCCCCCCCCc-ccCCC
Q 003970 269 KCTEADILAAFDDALHD------GVDVISASFGESPPLRPFFASNADIGSFNAMQHGVTVVFSGGNDGPEPSLV-QNVAP 341 (782)
Q Consensus 269 ~~~~~~i~~ai~~a~~~------gvdVIn~SlG~~~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~G~~~~~~-~~~ap 341 (782)
.++.+++++||+|++++ +++|||||||+.. ...+..++.++.++|++||+||||+|...... +...|
T Consensus 258 ~g~~s~ii~aI~~a~~~~~~~~~g~~VINmSlGg~~------s~~l~~Ai~~A~~~GVlvVaAAGN~G~~~~~~sPA~~~ 331 (692)
T 2p4e_P 258 KGTVSGTLIGLEFIRKSQLVQPVGPLVVLLPLAGGY------SRVLNAACQRLARAGVVLVTAAGNFRDDACLYSPASAP 331 (692)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CCCHHHHHHHHHHHHhhhhcccCCceEEEecCCCCC------cHHHHHHHHHHHHCCCEEEEECCCCCCCCCccCcccCC
Confidence 57888999999999986 8999999999763 24556667788899999999999999765333 45579
Q ss_pred ceEEecccccCcccceeEEeCCccEEEeeeeecccceeeEEEccccccCCccccCCCCCCCCCceEEEEeeCCCCccHHH
Q 003970 342 WSICVAASSIDRTFPTEIVVNSDFSIVGESFISTEVKAKLVEAFTYFADGICKCENWMGRKATGRVVLCFSTMGSVKTEE 421 (782)
Q Consensus 342 ~vitVgAs~~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~lv~~~~~~~~~~c~~~~~~~~~~~gkiv~~~~g~~~~~~~~ 421 (782)
++|+|||++.+...
T Consensus 332 ~vItVGA~d~~~~~------------------------------------------------------------------ 345 (692)
T 2p4e_P 332 EVITVGATNAQDQP------------------------------------------------------------------ 345 (692)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CEEEEEEEcCCCCc------------------------------------------------------------------
Confidence 99999996532100
Q ss_pred HHHHHHHcCceEEEEecCCCccccccccccEEEEehhhHHHHHHHHhcCCCCcEEEEccCccccCCCCCCccccccCCCC
Q 003970 422 AEAAAKKANASGLIFAEPMTELIAEVDIIPTVRIDIAQGTQLRDYLAQFPRLPIVQLKPSKTSIGKVPAPTVAYFSSRGP 501 (782)
Q Consensus 422 k~~~~~~~Ga~g~i~~n~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSS~Gp 501 (782)
...-+.||+|||
T Consensus 346 --------------------------------------------------------------------a~~ss~fSn~G~ 357 (692)
T 2p4e_P 346 --------------------------------------------------------------------VTLGTLGTNFGR 357 (692)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------cccccccCCCCC
Confidence 000123899998
Q ss_pred CCCCCCCcccceeecCceEEeecCCCCCCCCCCCCCCccceeeeccccchhhHHHHHHHHHHHhCCCCCHHHHHHHHHhc
Q 003970 502 SSISPDILKPDITAPGIGVLAAWPPNTPPTLLPSDGRSVKWNFQSGTSMSCPHVSGVVALIKSAHPNWSPAAIRSALMTT 581 (782)
Q Consensus 502 ~~~~~~~~KPDI~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~P~lsp~~Ik~~L~~T 581 (782)
. |||+|||++|+++++... ..|..++|||||||||||++|||+|++|+|+|++||++|++|
T Consensus 358 ~--------vDI~APG~~I~St~~~~~-----------~~y~~~SGTSmAAPhVAG~aALlls~~P~ltp~qVk~~L~~t 418 (692)
T 2p4e_P 358 C--------VDLFAPGEDIIGASSDCS-----------TCFVSQSGTSQAAAHVAGIAAMMLSAEPELTLAELRQRLIHF 418 (692)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred c--------eeEEecCCcEEeeccCCC-----------CceEeccchHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHh
Confidence 4 799999999999998642 178999999999999999999999999999999999999999
Q ss_pred cccC
Q 003970 582 AYTR 585 (782)
Q Consensus 582 A~~~ 585 (782)
|.+.
T Consensus 419 A~~~ 422 (692)
T 2p4e_P 419 SAKD 422 (692)
T ss_dssp ----
T ss_pred cccc
Confidence 9863
No 9
>1r6v_A Subtilisin-like serine protease; sandwich domain, propeptide, hydrolase; 1.70A {Fervidobacterium pennivorans} SCOP: c.41.1.1
Probab=100.00 E-value=3.6e-53 Score=491.41 Aligned_cols=378 Identities=23% Similarity=0.224 Sum_probs=273.9
Q ss_pred CCceEEEEeCCCCCCCCchhhHHHHHHHHHHhCCchhhccceEEEeeeeeeeEEEEeCH---H-HHHHHhc--CcCeEEE
Q 003970 26 ASHVYIVYLGHNRHCDPNLISKSHLQLLSSVFASEEDAKRSLLYGYKYSFSGFSAKLNS---S-QAASLAE--MEEVISI 99 (782)
Q Consensus 26 ~~~~yIV~l~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~i~~~y~~~~ng~s~~l~~---~-~~~~L~~--~p~V~~V 99 (782)
.+.+|||+|++.. ...++++.. ..++.+++. .+++++++++. + .+++|++ +|+|++|
T Consensus 30 ~~~~~IV~~k~~~---------~~~~~~~~~-------g~~v~~~~~-~i~~~~~~~~~~~~~~~~~~l~~~~~~~V~~v 92 (671)
T 1r6v_A 30 TEGKILVGYNDRS---------EVDKIVKAV-------NGKVVLELP-QIKVVSIKLNGMTVKQAYDKIKALALKGIRYV 92 (671)
T ss_dssp CTTEEEEEESSHH---------HHHHHHHHH-------TCEEEEEEG-GGTEEEEECSSCCHHHHHHHHTTSCCSSEEEE
T ss_pred CCccEEEEECCCc---------CHHHHHHhc-------CCeEEEEcC-CCcEEEEEeCCcCHHHHHHHHHhccCCCceEE
Confidence 4679999999741 223333332 134667776 78999999864 3 3566764 8999999
Q ss_pred Eecceeeccccc---------------------------ccccccccccCCCCcc-CCCCCCCCCcEEEEeccccCCCCC
Q 003970 100 FESQVLKLHTTR---------------------------SWDFMGLILDNTGEVT-PVQLAYGDDIVVGIFDTGVWPESE 151 (782)
Q Consensus 100 ~~~~~~~~~~~~---------------------------s~~~~gl~~~~~~~~~-~~~~~~G~gV~VgVIDtGId~~Hp 151 (782)
+|+..+++.... ....+++... +++.+ |.. .+|+||+|||||||||++||
T Consensus 93 epd~~~~l~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~l~~I-~~~~a~w~~-~tG~gV~VAVIDTGVd~~Hp 170 (671)
T 1r6v_A 93 EPSYKRELIKPTVVKPNPDMYKIRKPGLNSTARDYGEELSNELWGLEAI-GVTQQLWEE-ASGTNIIVAVVDTGVDGTHP 170 (671)
T ss_dssp ECCBCCEECCCEECCCCTTTTCSSSSCCSSSTTCCSSTTGGGCHHHHHT-TCCHHHHHH-CSCTTCEEEEEESCCBTTSG
T ss_pred ecCeEEEeccccccCcccccccccccccccccccccccccccCCchhcc-CCchhhhhc-cCCCCCEEEEEeCCCCCCCc
Confidence 999876543100 0011233333 67777 887 89999999999999999999
Q ss_pred CCCCCCCCCCCCCCccceeeccCcCCCCcccCcceeeeEecccccccccCCCCCCCCCCCCCCCCCCCCchhhhhhhccc
Q 003970 152 SFQEEPSMSPIPSSWKGTCVRGEKFDPQKACNRKLIGARYYVKGFEEEYGPLNASTNREYRSARDFLGHGTHTASTAAGS 231 (782)
Q Consensus 152 ~f~d~~~~~~~~~~~~g~~~~g~~f~~~~~~n~kiig~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~gHGTHVAgiaag~ 231 (782)
+|.+.. +. |.+++.+... . ...+..|.+||||||||||||.
T Consensus 171 dL~~~~--------~~--------------------g~~~~~~~~~-p----------~~~d~~d~~gHGThVAGiIAa~ 211 (671)
T 1r6v_A 171 DLEGQV--------IA--------------------GYRPAFDEEL-P----------AGTDSSYGGSAGTHVAGTIAAK 211 (671)
T ss_dssp GGTTTB--------CC--------------------EEEGGGTEEE-C----------TTCBCCTTCSHHHHHHHHHHCC
T ss_pred cccccE--------Ee--------------------cccccCCCcC-C----------CCCCCccCCCcchhhhhhhhcc
Confidence 997532 11 1111111000 0 0123446789999999999997
Q ss_pred cccCCcccccCCcceeeecCCCeEEEEEeeeCC---CCCCCCCHHHHHHHHHHHhhcCCcEEEecccCCCCCCCCccChH
Q 003970 232 IAKNAGFFGLGRGIARGGAPRARLAVYKICWGK---DSDGKCTEADILAAFDDALHDGVDVISASFGESPPLRPFFASNA 308 (782)
Q Consensus 232 ~~~~~~~~G~~~g~~~GVAP~A~l~~~kv~~~~---~~~~~~~~~~i~~ai~~a~~~gvdVIn~SlG~~~~~~~~~~~~~ 308 (782)
. ++ ..+.||||+|+|+.+|+++.. +..+....+.+++||+||+++|++|||||||... +...+
T Consensus 212 ~-ng--------~gv~GVAP~A~I~~vkv~~~~~~~~g~g~~s~~~i~~ai~~A~~~gadVIN~SlG~~~-----~s~~l 277 (671)
T 1r6v_A 212 K-DG--------KGIVGVAPGAKIMPIVIFDDPALVGGNGYVGDDYVAAGIIWATDHGAKVMNHSWGGWG-----YSYTM 277 (671)
T ss_dssp C-SS--------SSCCCSCTTSEEEEEESBCCHHHHCTTSBCCHHHHHHHHHHHHHTTCSEEEECEEBSC-----CCHHH
T ss_pred C-CC--------CceEEECCCCEEEEEEeccCccccCCCCccCHHHHHHHHHHHHHcCCCEEEeCCCCCC-----CCHHH
Confidence 4 21 235899999999999999761 1111345678999999999999999999999863 34567
Q ss_pred HHHHHhhhccCceEEEecCCCCCCC-CCcccCCCceEEecccccCcccceeEEeCCccEEEeeeeecccceeeEEEcccc
Q 003970 309 DIGSFNAMQHGVTVVFSGGNDGPEP-SLVQNVAPWSICVAASSIDRTFPTEIVVNSDFSIVGESFISTEVKAKLVEAFTY 387 (782)
Q Consensus 309 ~~a~~~a~~~Gi~vV~AAGN~G~~~-~~~~~~ap~vitVgAs~~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~lv~~~~~ 387 (782)
..++.+|.++|+++|+||||+|... ...+...|++|+|||++.+..
T Consensus 278 ~~Ai~~A~~~GvlvVaAAGN~g~~~~~~yPA~~~~VItVgA~d~~g~--------------------------------- 324 (671)
T 1r6v_A 278 KEAFDYAMEHGVVMVVSAGNNTSDSHHQYPAGYPGVIQVAALDYYGG--------------------------------- 324 (671)
T ss_dssp HHHHHHHHHTTCEEEEECCSCSSSCCCCBTTTSTTCEEEEEEEEETT---------------------------------
T ss_pred HHHHHHHHhCCCEEEEeCCCCCCCCCccCcccCCCeEEEEEEcCCCC---------------------------------
Confidence 7888889999999999999999764 344556799999999542110
Q ss_pred ccCCccccCCCCCCCCCceEEEEeeCCCCccHHHHHHHHHHcCceEEEEecCCCccccccccccEEEEehhhHHHHHHHH
Q 003970 388 FADGICKCENWMGRKATGRVVLCFSTMGSVKTEEAEAAAKKANASGLIFAEPMTELIAEVDIIPTVRIDIAQGTQLRDYL 467 (782)
Q Consensus 388 ~~~~~c~~~~~~~~~~~gkiv~~~~g~~~~~~~~k~~~~~~~Ga~g~i~~n~~~~~~~~~~~~p~~~i~~~~g~~l~~~~ 467 (782)
T Consensus 325 -------------------------------------------------------------------------------- 324 (671)
T 1r6v_A 325 -------------------------------------------------------------------------------- 324 (671)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hcCCCCcEEEEccCccccCCCCCCccccccCCCCCCCCCCCcccceeecCceEEeecCCCCCCCC-----CCCCCCccce
Q 003970 468 AQFPRLPIVQLKPSKTSIGKVPAPTVAYFSSRGPSSISPDILKPDITAPGIGVLAAWPPNTPPTL-----LPSDGRSVKW 542 (782)
Q Consensus 468 ~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSS~Gp~~~~~~~~KPDI~APG~~I~sa~~~~~~~~~-----~~~~~~~~~y 542 (782)
...+++||++||. +||+|||++|+++++....... .........|
T Consensus 325 ----------------------~~~~a~fSn~G~~--------vdv~APG~~I~St~p~~~~~g~~~~~~~~~~~~~~~y 374 (671)
T 1r6v_A 325 ----------------------TFRVAGFSSRSDG--------VSVGAPGVTILSTVPGEDSIGYEGHNENVPATNGGTY 374 (671)
T ss_dssp ----------------------EEEECSSSCCCTT--------EEEEEECSSEEEECCCTTSTTCCCCCTTCCCSSSCCE
T ss_pred ----------------------ceeeccccCCCCC--------eeEEecCCCEEeecCCCCccccccccccccccCCCce
Confidence 1136899999997 6999999999999986432110 0011223479
Q ss_pred eeeccccchhhHHHHHHHHHHHhCCCCCHHHHHHHHHhccccCCCCCCccccCCCCCcCCCCCccccccCccccCCCcee
Q 003970 543 NFQSGTSMSCPHVSGVVALIKSAHPNWSPAAIRSALMTTAYTRDTSHDSILAGGSMKVSDPFDIGAGHINPMKAMDPGLI 622 (782)
Q Consensus 543 ~~~sGTSmAaP~VAG~aALl~q~~P~lsp~~Ik~~L~~TA~~~~~~g~~~~~~~~~~~~~~~~~G~G~vn~~~Al~~glv 622 (782)
..++|||||||||||++|||+|++|+|+|.+||++|++||+++...+ .+..+|||+||+.+|++..|.
T Consensus 375 ~~~sGTSmAAP~VAGvaALl~s~~P~lt~~~Vr~~L~~TA~~~~~~g------------~d~~~G~G~vna~~Al~~~l~ 442 (671)
T 1r6v_A 375 DYYQGTSMAAPHVTGVVAVLLQKFPNAKPWQIRKLLENTAFDFNGNG------------WDHDTGYGLVKLDAALQGPLP 442 (671)
T ss_dssp EEEESHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHHCBCSSSSS------------CBTTTBTCBCCHHHHHHCCCC
T ss_pred EEecCccHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHhCcCCCCCC------------CCCCcccceeCHHHHhhhhcC
Confidence 99999999999999999999999999999999999999999765432 345899999999999998777
Q ss_pred ecCCchhh
Q 003970 623 YDLKPTDY 630 (782)
Q Consensus 623 ~d~~~~~~ 630 (782)
.+....+|
T Consensus 443 ~~~~~~~~ 450 (671)
T 1r6v_A 443 TQGGVEEF 450 (671)
T ss_dssp SSSEEEEE
T ss_pred CCCCccce
Confidence 66554444
No 10
>1gci_A Subtilisin; hydrolase, serine protease; 0.78A {Bacillus lentus} SCOP: c.41.1.1 PDB: 1jea_A 1ndq_A 1svn_A 1tk2_A* 3bx1_A 1ah2_A 1iav_A* 1c9m_A* 1wsd_A 1mpt_A 1ndu_A 1c9j_A 1q5p_A* 1st3_A 1c9n_A*
Probab=100.00 E-value=3.3e-51 Score=430.98 Aligned_cols=263 Identities=29% Similarity=0.371 Sum_probs=219.9
Q ss_pred cccccCCCCccCCCCCCCCCcEEEEeccccCCCCCCCCCCCCCCCCCCCccceeeccCcCCCCcccCcceeeeEeccccc
Q 003970 117 GLILDNTGEVTPVQLAYGDDIVVGIFDTGVWPESESFQEEPSMSPIPSSWKGTCVRGEKFDPQKACNRKLIGARYYVKGF 196 (782)
Q Consensus 117 gl~~~~~~~~~~~~~~~G~gV~VgVIDtGId~~Hp~f~d~~~~~~~~~~~~g~~~~g~~f~~~~~~n~kiig~~~~~~~~ 196 (782)
++... +++.+|..+++|+||+|+|||||| .+||+|+. .+.+.|..+
T Consensus 7 ~l~~i-~~~~a~~~g~~G~gv~VaViDtGi-~~h~~l~~-------------------------------~~~~~~~~~- 52 (269)
T 1gci_A 7 GISRV-QAPAAHNRGLTGSGVKVAVLDTGI-STHPDLNI-------------------------------RGGASFVPG- 52 (269)
T ss_dssp HHHHT-THHHHHHTTCSCTTCEEEEEESCC-CCCTTCCE-------------------------------EEEEECSTT-
T ss_pred Chhhc-CcHHHHhcCCCCCCCEEEEECCCC-CCCHhhcc-------------------------------cCCcccCCC-
Confidence 44443 677899999999999999999999 89999941 111222211
Q ss_pred ccccCCCCCCCCCCCCCCCCCCCCchhhhhhhccccccCCcccccCCcceeeecCCCeEEEEEeeeCCCCCCCCCHHHHH
Q 003970 197 EEEYGPLNASTNREYRSARDFLGHGTHTASTAAGSIAKNAGFFGLGRGIARGGAPRARLAVYKICWGKDSDGKCTEADIL 276 (782)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~D~~gHGTHVAgiaag~~~~~~~~~G~~~g~~~GVAP~A~l~~~kv~~~~~~~~~~~~~~i~ 276 (782)
...+.|..||||||||||+|..+ ...+.||||+|+|+.+|+++..+ .+..++++
T Consensus 53 --------------~~~~~d~~gHGT~vAgiia~~~~---------~~~~~GvAp~a~l~~~~v~~~~g---~~~~~~~~ 106 (269)
T 1gci_A 53 --------------EPSTQDGNGHGTHVAGTIAALNN---------SIGVLGVAPSAELYAVKVLGASG---SGSVSSIA 106 (269)
T ss_dssp --------------CCSCSCSSSHHHHHHHHHHCCCS---------SSBCCCSSTTCEEEEEECBCTTS---CBCHHHHH
T ss_pred --------------CCCCCCCCCChHHHHHHHhcCcC---------CCCcEEeCCCCEEEEEEeECCCC---CcCHHHHH
Confidence 12356789999999999999731 12358999999999999998776 57889999
Q ss_pred HHHHHHhhcCCcEEEecccCCCCCCCCccChHHHHHHhhhccCceEEEecCCCCCCCCCcccCCCceEEecccccCcccc
Q 003970 277 AAFDDALHDGVDVISASFGESPPLRPFFASNADIGSFNAMQHGVTVVFSGGNDGPEPSLVQNVAPWSICVAASSIDRTFP 356 (782)
Q Consensus 277 ~ai~~a~~~gvdVIn~SlG~~~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~G~~~~~~~~~ap~vitVgAs~~d~~~~ 356 (782)
+||+||++++++|||||||... ....+..++.++.++|++||+||||+|......+...+++|+|||++.
T Consensus 107 ~ai~~a~~~~~~Vin~S~G~~~-----~~~~~~~ai~~a~~~gv~vV~AaGN~g~~~~~~Pa~~~~vi~Vga~~~----- 176 (269)
T 1gci_A 107 QGLEWAGNNGMHVANLSLGSPS-----PSATLEQAVNSATSRGVLVVAASGNSGAGSISYPARYANAMAVGATDQ----- 176 (269)
T ss_dssp HHHHHHHHTTCSEEEECCCBSS-----CCHHHHHHHHHHHHTTCEEEEECCSSCCSSCCBTTTSTTEEEEEEECT-----
T ss_pred HHHHHHHHCCCeEEEeCCCCCC-----CCHHHHHHHHHHHHCCCEEEEecCCCCCCCCcCCccCCCeEEEEeecC-----
Confidence 9999999999999999999874 235677788889999999999999999876666667899999998541
Q ss_pred eeEEeCCccEEEeeeeecccceeeEEEccccccCCccccCCCCCCCCCceEEEEeeCCCCccHHHHHHHHHHcCceEEEE
Q 003970 357 TEIVVNSDFSIVGESFISTEVKAKLVEAFTYFADGICKCENWMGRKATGRVVLCFSTMGSVKTEEAEAAAKKANASGLIF 436 (782)
Q Consensus 357 ~~~~~~~~~~~~g~~~~~~~~~~~lv~~~~~~~~~~c~~~~~~~~~~~gkiv~~~~g~~~~~~~~k~~~~~~~Ga~g~i~ 436 (782)
T Consensus 177 -------------------------------------------------------------------------------- 176 (269)
T 1gci_A 177 -------------------------------------------------------------------------------- 176 (269)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ecCCCccccccccccEEEEehhhHHHHHHHHhcCCCCcEEEEccCccccCCCCCCccccccCCCCCCCCCCCcccceeec
Q 003970 437 AEPMTELIAEVDIIPTVRIDIAQGTQLRDYLAQFPRLPIVQLKPSKTSIGKVPAPTVAYFSSRGPSSISPDILKPDITAP 516 (782)
Q Consensus 437 ~n~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSS~Gp~~~~~~~~KPDI~AP 516 (782)
.+.++.||++||. |||+||
T Consensus 177 -----------------------------------------------------~~~~~~~S~~G~~--------~di~AP 195 (269)
T 1gci_A 177 -----------------------------------------------------NNNRASFSQYGAG--------LDIVAP 195 (269)
T ss_dssp -----------------------------------------------------TSCBCTTCCCSTT--------EEEEEE
T ss_pred -----------------------------------------------------CCCCCCCCCCCCC--------cceEec
Confidence 2356899999996 699999
Q ss_pred CceEEeecCCCCCCCCCCCCCCccceeeeccccchhhHHHHHHHHHHHhCCCCCHHHHHHHHHhccccCCCCCCccccCC
Q 003970 517 GIGVLAAWPPNTPPTLLPSDGRSVKWNFQSGTSMSCPHVSGVVALIKSAHPNWSPAAIRSALMTTAYTRDTSHDSILAGG 596 (782)
Q Consensus 517 G~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~P~lsp~~Ik~~L~~TA~~~~~~g~~~~~~~ 596 (782)
|++|+++++.+ .|..++|||||||||||++|||+|++|+|++.|||++|++||+++.
T Consensus 196 G~~i~s~~~~~-------------~~~~~sGTS~AaP~vaG~aAll~~~~p~~t~~~v~~~L~~tA~~~g---------- 252 (269)
T 1gci_A 196 GVNVQSTYPGS-------------TYASLNGTSMATPHVAGAAALVKQKNPSWSNVQIRNHLKNTATSLG---------- 252 (269)
T ss_dssp CSSEEEEETTT-------------EEEEECSHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHTSBCCS----------
T ss_pred CCCeEeecCCC-------------CEEEcCcHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHhCccCC----------
Confidence 99999999865 8999999999999999999999999999999999999999999753
Q ss_pred CCCcCCCCCccccccCccccCC
Q 003970 597 SMKVSDPFDIGAGHINPMKAMD 618 (782)
Q Consensus 597 ~~~~~~~~~~G~G~vn~~~Al~ 618 (782)
++..||||+||+.+|++
T Consensus 253 -----~~~~~G~G~vn~~~A~~ 269 (269)
T 1gci_A 253 -----STNLYGSGLVNAEAATR 269 (269)
T ss_dssp -----CHHHHTTCBCCHHHHTC
T ss_pred -----CCCCcccCccCHHHHcC
Confidence 34579999999999985
No 11
>1dbi_A AK.1 serine protease; hydrolase; 1.80A {Bacillus SP} SCOP: c.41.1.1
Probab=100.00 E-value=7.1e-51 Score=431.23 Aligned_cols=266 Identities=26% Similarity=0.297 Sum_probs=215.3
Q ss_pred cccccCCCCccCCCCCCCCCcEEEEeccccCCCCCCCCCCCCCCCCCCCccceeeccCcCCCCcccCcceeeeEeccccc
Q 003970 117 GLILDNTGEVTPVQLAYGDDIVVGIFDTGVWPESESFQEEPSMSPIPSSWKGTCVRGEKFDPQKACNRKLIGARYYVKGF 196 (782)
Q Consensus 117 gl~~~~~~~~~~~~~~~G~gV~VgVIDtGId~~Hp~f~d~~~~~~~~~~~~g~~~~g~~f~~~~~~n~kiig~~~~~~~~ 196 (782)
++... +++.+|..+..|+||+|+|||||||++||+|.+. ++..+.|.+.
T Consensus 14 ~l~~i-~~~~aw~~~~g~~gv~VaViDtGvd~~hp~l~~~-----------------------------~~~~~~~~~~- 62 (280)
T 1dbi_A 14 GPQNT-YTDYAWDVTKGSSGQEIAVIDTGVDYTHPDLDGK-----------------------------VIKGYDFVDN- 62 (280)
T ss_dssp TTGGG-THHHHTTTCCCCTTCEEEEEESCCCTTSTTTTTT-----------------------------EEEEEETTTT-
T ss_pred Chhhc-CcHHHHhhcCCCCCCEEEEEeCCcCCCChhhccC-----------------------------cccceeccCC-
Confidence 44443 6788999988888999999999999999999632 2333333321
Q ss_pred ccccCCCCCCCCCCCCCCCCCCCCchhhhhhhccccccCCcccccCCcceeeecCCCeEEEEEeeeCCCCCCCCCHHHHH
Q 003970 197 EEEYGPLNASTNREYRSARDFLGHGTHTASTAAGSIAKNAGFFGLGRGIARGGAPRARLAVYKICWGKDSDGKCTEADIL 276 (782)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~D~~gHGTHVAgiaag~~~~~~~~~G~~~g~~~GVAP~A~l~~~kv~~~~~~~~~~~~~~i~ 276 (782)
..++.|..||||||||||+|...++. .+.||||+|+|+.+|+++..+ .+..++++
T Consensus 63 --------------~~~~~d~~gHGT~vAgiia~~~~~~~--------g~~GvAp~a~l~~~kv~~~~g---~~~~~~i~ 117 (280)
T 1dbi_A 63 --------------DYDPMDLNNHGTHVAGIAAAETNNAT--------GIAGMAPNTRILAVRALDRNG---SGTLSDIA 117 (280)
T ss_dssp --------------BSCCCCSSSHHHHHHHHHHCCCSSSS--------SCCCSSSSCEEEEEECCCTTS---CCCHHHHH
T ss_pred --------------CCCCCCCCCcHHHHHHHHhCcCCCCC--------cceEeCCCCEEEEEEEECCCC---CcCHHHHH
Confidence 12457889999999999999864322 258999999999999998766 57889999
Q ss_pred HHHHHHhhcCCcEEEecccCCCCCCCCccChHHHHHHhhhccCceEEEecCCCCCCCCCcccCCCceEEecccccCcccc
Q 003970 277 AAFDDALHDGVDVISASFGESPPLRPFFASNADIGSFNAMQHGVTVVFSGGNDGPEPSLVQNVAPWSICVAASSIDRTFP 356 (782)
Q Consensus 277 ~ai~~a~~~gvdVIn~SlG~~~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~G~~~~~~~~~ap~vitVgAs~~d~~~~ 356 (782)
+||+||+++|++|||||||... ....+..++.++.++|+++|+||||+|......+...+++|+|||++.
T Consensus 118 ~ai~~a~~~g~~Vin~S~G~~~-----~~~~~~~ai~~a~~~gilvV~AAGN~g~~~~~~Pa~~~~vi~Vga~~~----- 187 (280)
T 1dbi_A 118 DAIIYAADSGAEVINLSLGCDC-----HTTTLENAVNYAWNKGSVVVAAAGNNGSSTTFEPASYENVIAVGAVDQ----- 187 (280)
T ss_dssp HHHHHHHHTTCSEEEECCSSCC-----CCHHHHHHHHHHHHTTCEEEEECCBC---------CCTTSEEEEEECT-----
T ss_pred HHHHHHHHCCCCEEEeCCCCCC-----CCHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCccccCCeEEEEeeCC-----
Confidence 9999999999999999999873 235677788889999999999999999766556667899999998541
Q ss_pred eeEEeCCccEEEeeeeecccceeeEEEccccccCCccccCCCCCCCCCceEEEEeeCCCCccHHHHHHHHHHcCceEEEE
Q 003970 357 TEIVVNSDFSIVGESFISTEVKAKLVEAFTYFADGICKCENWMGRKATGRVVLCFSTMGSVKTEEAEAAAKKANASGLIF 436 (782)
Q Consensus 357 ~~~~~~~~~~~~g~~~~~~~~~~~lv~~~~~~~~~~c~~~~~~~~~~~gkiv~~~~g~~~~~~~~k~~~~~~~Ga~g~i~ 436 (782)
T Consensus 188 -------------------------------------------------------------------------------- 187 (280)
T 1dbi_A 188 -------------------------------------------------------------------------------- 187 (280)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ecCCCccccccccccEEEEehhhHHHHHHHHhcCCCCcEEEEccCccccCCCCCCccccccCCCCCCCCCCCcccceeec
Q 003970 437 AEPMTELIAEVDIIPTVRIDIAQGTQLRDYLAQFPRLPIVQLKPSKTSIGKVPAPTVAYFSSRGPSSISPDILKPDITAP 516 (782)
Q Consensus 437 ~n~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSS~Gp~~~~~~~~KPDI~AP 516 (782)
.+.++.||++||. |||+||
T Consensus 188 -----------------------------------------------------~~~~~~~S~~G~~--------~dv~Ap 206 (280)
T 1dbi_A 188 -----------------------------------------------------YDRLASFSNYGTW--------VDVVAP 206 (280)
T ss_dssp -----------------------------------------------------TSCBCTTBCCSTT--------CCEEEE
T ss_pred -----------------------------------------------------CCCcCCCCCCCCC--------ceEEEe
Confidence 2357899999986 699999
Q ss_pred CceEEeecCCCCCCCCCCCCCCccceeeeccccchhhHHHHHHHHHHHhCCCCCHHHHHHHHHhccccCCCCCCccccCC
Q 003970 517 GIGVLAAWPPNTPPTLLPSDGRSVKWNFQSGTSMSCPHVSGVVALIKSAHPNWSPAAIRSALMTTAYTRDTSHDSILAGG 596 (782)
Q Consensus 517 G~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~P~lsp~~Ik~~L~~TA~~~~~~g~~~~~~~ 596 (782)
|++|+++++.+ .|..++|||||||||||++|||++ |.+++.+||++|++||+++..
T Consensus 207 G~~i~s~~~~~-------------~~~~~sGTS~AaP~vaG~aAll~~--p~~t~~~v~~~L~~ta~~~~~--------- 262 (280)
T 1dbi_A 207 GVDIVSTITGN-------------RYAYMSGTSMASPHVAGLAALLAS--QGRNNIEIRQAIEQTADKISG--------- 262 (280)
T ss_dssp CSSEEEEETTT-------------EEEEECSHHHHHHHHHHHHHHHHH--TTCCHHHHHHHHHHTSBCCTT---------
T ss_pred cCCeEeecCCC-------------CEEEccCHHHHHHHHHHHHHHHHC--CCCCHHHHHHHHHHhCccCCC---------
Confidence 99999999865 899999999999999999999987 899999999999999997642
Q ss_pred CCCcCCCCCccccccCccccCC
Q 003970 597 SMKVSDPFDIGAGHINPMKAMD 618 (782)
Q Consensus 597 ~~~~~~~~~~G~G~vn~~~Al~ 618 (782)
....||+|+||+.+|++
T Consensus 263 -----~~~~~G~G~vn~~~A~~ 279 (280)
T 1dbi_A 263 -----TGTYFKYGRINSYNAVT 279 (280)
T ss_dssp -----BTTTBSSEECCHHHHHT
T ss_pred -----CCCcccCCEECHHHHhc
Confidence 12479999999999986
No 12
>1r0r_E Subtilisin carlsberg; high resolution, serine protease, protein inhibitor, hydrolase; 1.10A {Bacillus licheniformis} SCOP: c.41.1.1 PDB: 1af4_A* 1be8_A* 1bfk_A 1bfu_A 1be6_A 1oyv_A 1cse_E 1sbc_A 1sca_A 1scb_A 1scd_A 2sec_E 2wuv_A 2wuw_E 1yu6_A 1scn_E* 1c3l_A 1avt_A* 1av7_A* 1sel_A ...
Probab=100.00 E-value=2.1e-51 Score=434.07 Aligned_cols=264 Identities=31% Similarity=0.396 Sum_probs=218.4
Q ss_pred cccccCCCCccCCCCCCCCCcEEEEeccccCCCCCCCCCCCCCCCCCCCccceeeccCcCCCCcccCcceeeeEeccccc
Q 003970 117 GLILDNTGEVTPVQLAYGDDIVVGIFDTGVWPESESFQEEPSMSPIPSSWKGTCVRGEKFDPQKACNRKLIGARYYVKGF 196 (782)
Q Consensus 117 gl~~~~~~~~~~~~~~~G~gV~VgVIDtGId~~Hp~f~d~~~~~~~~~~~~g~~~~g~~f~~~~~~n~kiig~~~~~~~~ 196 (782)
++... +++.+|..+++|+||+|+|||||||++||+|+. ...+.|..+
T Consensus 7 ~l~~i-~~~~~~~~g~~G~gv~VaViDtGid~~h~~l~~-------------------------------~~g~~~~~~- 53 (274)
T 1r0r_E 7 GIPLI-KADKVQAQGFKGANVKVAVLDTGIQASHPDLNV-------------------------------VGGASFVAG- 53 (274)
T ss_dssp HHHHT-THHHHHHHTCSCTTCEEEEEESCCCTTCTTCCE-------------------------------EEEEECSTT-
T ss_pred chhhc-CCHHHHhcCCCCCCCEEEEEcCCCCCCCHhHcC-------------------------------CCCccccCC-
Confidence 44443 677899999999999999999999999999941 111222211
Q ss_pred ccccCCCCCCCCCCCCCCCCCCCCchhhhhhhccccccCCcccccCCcceeeecCCCeEEEEEeeeCCCCCCCCCHHHHH
Q 003970 197 EEEYGPLNASTNREYRSARDFLGHGTHTASTAAGSIAKNAGFFGLGRGIARGGAPRARLAVYKICWGKDSDGKCTEADIL 276 (782)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~D~~gHGTHVAgiaag~~~~~~~~~G~~~g~~~GVAP~A~l~~~kv~~~~~~~~~~~~~~i~ 276 (782)
...+.|..||||||||||+|..+ ...+.||||+|+|+.+|+++..+ .+..++++
T Consensus 54 --------------~~~~~d~~gHGT~vAgiia~~~~---------~~g~~GvAp~a~l~~~~v~~~~g---~~~~~~i~ 107 (274)
T 1r0r_E 54 --------------EAYNTDGNGHGTHVAGTVAALDN---------TTGVLGVAPSVSLYAVKVLNSSG---SGSYSGIV 107 (274)
T ss_dssp --------------CCTTCCSSSHHHHHHHHHHCCSS---------SSBCCCSSTTSEEEEEECSCTTS---EECHHHHH
T ss_pred --------------CCCCCCCCCCHHHHHHHHHccCC---------CCceEEECCCCEEEEEEEECCCC---CccHHHHH
Confidence 11346789999999999999731 12358999999999999998766 57889999
Q ss_pred HHHHHHhhcCCcEEEecccCCCCCCCCccChHHHHHHhhhccCceEEEecCCCCCCC----CCcccCCCceEEecccccC
Q 003970 277 AAFDDALHDGVDVISASFGESPPLRPFFASNADIGSFNAMQHGVTVVFSGGNDGPEP----SLVQNVAPWSICVAASSID 352 (782)
Q Consensus 277 ~ai~~a~~~gvdVIn~SlG~~~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~G~~~----~~~~~~ap~vitVgAs~~d 352 (782)
+||+||++++++|||||||... ....+..++.++.++|+++|+||||+|... ...+...+++|+|||++.
T Consensus 108 ~ai~~a~~~~~~Vin~S~G~~~-----~~~~~~~ai~~a~~~gi~vV~AAGN~g~~~~~~~~~~Pa~~~~vi~Vga~~~- 181 (274)
T 1r0r_E 108 SGIEWATTNGMDVINMSLGGAS-----GSTAMKQAVDNAYARGVVVVAAAGNSGNSGSTNTIGYPAKYDSVIAVGAVDS- 181 (274)
T ss_dssp HHHHHHHHTTCSEEEECEEBSS-----CCHHHHHHHHHHHHTTCEEEEECCSCCCCTTCCCCCBTTTSTTSEEEEEECT-
T ss_pred HHHHHHHHcCCCEEEeCCCCCC-----CcHHHHHHHHHHHHCCCEEEEeCCCCCCCCCCccccCCCCCCcEEEEEEecC-
Confidence 9999999999999999999874 235677888889999999999999999753 233445689999998531
Q ss_pred cccceeEEeCCccEEEeeeeecccceeeEEEccccccCCccccCCCCCCCCCceEEEEeeCCCCccHHHHHHHHHHcCce
Q 003970 353 RTFPTEIVVNSDFSIVGESFISTEVKAKLVEAFTYFADGICKCENWMGRKATGRVVLCFSTMGSVKTEEAEAAAKKANAS 432 (782)
Q Consensus 353 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~lv~~~~~~~~~~c~~~~~~~~~~~gkiv~~~~g~~~~~~~~k~~~~~~~Ga~ 432 (782)
T Consensus 182 -------------------------------------------------------------------------------- 181 (274)
T 1r0r_E 182 -------------------------------------------------------------------------------- 181 (274)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred EEEEecCCCccccccccccEEEEehhhHHHHHHHHhcCCCCcEEEEccCccccCCCCCCccccccCCCCCCCCCCCcccc
Q 003970 433 GLIFAEPMTELIAEVDIIPTVRIDIAQGTQLRDYLAQFPRLPIVQLKPSKTSIGKVPAPTVAYFSSRGPSSISPDILKPD 512 (782)
Q Consensus 433 g~i~~n~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSS~Gp~~~~~~~~KPD 512 (782)
.+.++.||++||. ||
T Consensus 182 ---------------------------------------------------------~~~~~~~S~~G~~--------~d 196 (274)
T 1r0r_E 182 ---------------------------------------------------------NSNRASFSSVGAE--------LE 196 (274)
T ss_dssp ---------------------------------------------------------TSCBCTTCCCSTT--------EE
T ss_pred ---------------------------------------------------------CCCcCccCCCCCC--------ce
Confidence 2356899999985 79
Q ss_pred eeecCceEEeecCCCCCCCCCCCCCCccceeeeccccchhhHHHHHHHHHHHhCCCCCHHHHHHHHHhccccCCCCCCcc
Q 003970 513 ITAPGIGVLAAWPPNTPPTLLPSDGRSVKWNFQSGTSMSCPHVSGVVALIKSAHPNWSPAAIRSALMTTAYTRDTSHDSI 592 (782)
Q Consensus 513 I~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~P~lsp~~Ik~~L~~TA~~~~~~g~~~ 592 (782)
|+|||++|+++++.+ .|..++|||||||||||++|||+|++|+|++++||++|++||+++.
T Consensus 197 i~APG~~i~s~~~~~-------------~~~~~sGTS~AaP~vaG~aAll~~~~p~lt~~~v~~~L~~tA~~~g------ 257 (274)
T 1r0r_E 197 VMAPGAGVYSTYPTN-------------TYATLNGTSMASPHVAGAAALILSKHPNLSASQVRNRLSSTATYLG------ 257 (274)
T ss_dssp EEEECSSEEEEETTT-------------EEEEECSHHHHHHHHHHHHHHHHHHSTTCCHHHHHHHHHHTCBCCS------
T ss_pred EEeCCCCeEeecCCC-------------CEEEeccHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHhCcccC------
Confidence 999999999999875 8999999999999999999999999999999999999999999753
Q ss_pred ccCCCCCcCCCCCccccccCccccCC
Q 003970 593 LAGGSMKVSDPFDIGAGHINPMKAMD 618 (782)
Q Consensus 593 ~~~~~~~~~~~~~~G~G~vn~~~Al~ 618 (782)
++..||||+||+.+|++
T Consensus 258 ---------~~~~~G~G~~~~~~A~~ 274 (274)
T 1r0r_E 258 ---------SSFYYGKGLINVEAAAQ 274 (274)
T ss_dssp ---------CHHHHTTCBCCHHHHTC
T ss_pred ---------CCCCcccCccCHHHHhC
Confidence 34589999999999985
No 13
>1to2_E Subtilisin BPN'; serine protease, hydrolase; HET: CIT 15P; 1.30A {Bacillus amyloliquefaciens} SCOP: c.41.1.1 PDB: 1tm1_E* 1tm3_E* 1tm4_E* 1lw6_E* 1tm7_E* 1tmg_E* 1to1_E* 1tm5_E* 1y1k_E* 1y33_E* 1y34_E* 1y3b_E* 1y3c_E* 1y3d_E* 1y3f_E* 1y48_E* 1y4a_E* 1y4d_E 1sup_A* 1sib_E ...
Probab=100.00 E-value=4.7e-51 Score=432.82 Aligned_cols=266 Identities=31% Similarity=0.389 Sum_probs=219.2
Q ss_pred cccccCCCCccCCCCCCCCCcEEEEeccccCCCCCCCCCCCCCCCCCCCccceeeccCcCCCCcccCcceeeeEeccccc
Q 003970 117 GLILDNTGEVTPVQLAYGDDIVVGIFDTGVWPESESFQEEPSMSPIPSSWKGTCVRGEKFDPQKACNRKLIGARYYVKGF 196 (782)
Q Consensus 117 gl~~~~~~~~~~~~~~~G~gV~VgVIDtGId~~Hp~f~d~~~~~~~~~~~~g~~~~g~~f~~~~~~n~kiig~~~~~~~~ 196 (782)
++... +++.+|..+++|+||+|+|||||||++||+|+.. +.+.|...
T Consensus 7 ~l~~i-~~~~~~~~g~~G~gv~VaViDtGid~~h~~l~~~-------------------------------~g~~~~~~- 53 (281)
T 1to2_E 7 GVSQI-KAPALHSQGYTGSNVKVAVIDSGIDSSHPDLKVA-------------------------------GGASMVPS- 53 (281)
T ss_dssp HHHHT-THHHHHHHTCSCTTCEEEEEESCCCTTCTTCCEE-------------------------------EEEECCTT-
T ss_pred chhhc-ChHHHHhcCCCCCCCEEEEEcCCCCCCCHHHcCc-------------------------------CCccccCC-
Confidence 44443 6778999999999999999999999999999521 11122111
Q ss_pred ccccCCCCCCCCCCCCCCCCCCCCchhhhhhhccccccCCcccccCCcceeeecCCCeEEEEEeeeCCCCCCCCCHHHHH
Q 003970 197 EEEYGPLNASTNREYRSARDFLGHGTHTASTAAGSIAKNAGFFGLGRGIARGGAPRARLAVYKICWGKDSDGKCTEADIL 276 (782)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~D~~gHGTHVAgiaag~~~~~~~~~G~~~g~~~GVAP~A~l~~~kv~~~~~~~~~~~~~~i~ 276 (782)
+.....|..||||||||||+|..+ ...+.||||+|+|+.+|++...+ .+..++++
T Consensus 54 -------------~~~~~~d~~gHGT~vAgiia~~~~---------~~g~~GvAp~a~l~~~kv~~~~g---~~~~~~i~ 108 (281)
T 1to2_E 54 -------------ETNPFQDNNSHGTHVAGTVAALNN---------SIGVLGVAPSASLYAVKVLGADG---SGQYSWII 108 (281)
T ss_dssp -------------CCCTTCCSSSHHHHHHHHHHCCSS---------SSSBCCSSTTSEEEEEECSCTTS---EECHHHHH
T ss_pred -------------CCCCCCCCCCcHHHHHHHHhccCC---------CCcceeeCCCCEEEEEEEeCCCC---CccHHHHH
Confidence 111235789999999999999731 12358999999999999998765 57889999
Q ss_pred HHHHHHhhcCCcEEEecccCCCCCCCCccChHHHHHHhhhccCceEEEecCCCCCCC----CCcccCCCceEEecccccC
Q 003970 277 AAFDDALHDGVDVISASFGESPPLRPFFASNADIGSFNAMQHGVTVVFSGGNDGPEP----SLVQNVAPWSICVAASSID 352 (782)
Q Consensus 277 ~ai~~a~~~gvdVIn~SlG~~~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~G~~~----~~~~~~ap~vitVgAs~~d 352 (782)
++|+|+++++++|||||||... ....+..++.++.++|++||+||||+|... ...+...|++|+|||++.
T Consensus 109 ~ai~~a~~~~~~Vin~S~G~~~-----~~~~~~~ai~~a~~~gi~vV~AAGN~g~~~~~~~~~~Pa~~~~vi~Vga~~~- 182 (281)
T 1to2_E 109 NGIEWAIANNMDVINMSLGGPS-----GSAALKAAVDKAVASGVVVVAAAGNEGTSGSSSTVGYPGKYPSVIAVGAVDS- 182 (281)
T ss_dssp HHHHHHHHTTCSEEEECEEBSC-----CCHHHHHHHHHHHHTTCEEEEECCSCCCCTTSCCCCBTTTSTTSEEEEEECT-
T ss_pred HHHHHHHHCCCcEEEECCcCCC-----CCHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCccccCcCCCCEEEEEEecC-
Confidence 9999999999999999999874 235677788889999999999999999752 233445689999998431
Q ss_pred cccceeEEeCCccEEEeeeeecccceeeEEEccccccCCccccCCCCCCCCCceEEEEeeCCCCccHHHHHHHHHHcCce
Q 003970 353 RTFPTEIVVNSDFSIVGESFISTEVKAKLVEAFTYFADGICKCENWMGRKATGRVVLCFSTMGSVKTEEAEAAAKKANAS 432 (782)
Q Consensus 353 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~lv~~~~~~~~~~c~~~~~~~~~~~gkiv~~~~g~~~~~~~~k~~~~~~~Ga~ 432 (782)
T Consensus 183 -------------------------------------------------------------------------------- 182 (281)
T 1to2_E 183 -------------------------------------------------------------------------------- 182 (281)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred EEEEecCCCccccccccccEEEEehhhHHHHHHHHhcCCCCcEEEEccCccccCCCCCCccccccCCCCCCCCCCCcccc
Q 003970 433 GLIFAEPMTELIAEVDIIPTVRIDIAQGTQLRDYLAQFPRLPIVQLKPSKTSIGKVPAPTVAYFSSRGPSSISPDILKPD 512 (782)
Q Consensus 433 g~i~~n~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSS~Gp~~~~~~~~KPD 512 (782)
.+.++.||++||. ||
T Consensus 183 ---------------------------------------------------------~~~~~~fS~~G~~--------~d 197 (281)
T 1to2_E 183 ---------------------------------------------------------SNQRASFSSVGPE--------LD 197 (281)
T ss_dssp ---------------------------------------------------------TSCBCTTCCCSTT--------CC
T ss_pred ---------------------------------------------------------CCCcCCcCCCCCC--------ce
Confidence 2356899999996 69
Q ss_pred eeecCceEEeecCCCCCCCCCCCCCCccceeeeccccchhhHHHHHHHHHHHhCCCCCHHHHHHHHHhccccCCCCCCcc
Q 003970 513 ITAPGIGVLAAWPPNTPPTLLPSDGRSVKWNFQSGTSMSCPHVSGVVALIKSAHPNWSPAAIRSALMTTAYTRDTSHDSI 592 (782)
Q Consensus 513 I~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~P~lsp~~Ik~~L~~TA~~~~~~g~~~ 592 (782)
|+|||++|+++++.+ .|..++|||||||||||++|||+|++|+|++++||++|++||+++.
T Consensus 198 i~APG~~i~s~~~~~-------------~~~~~sGTS~AaP~vaG~aAll~~~~p~lt~~~v~~~L~~tA~~~g------ 258 (281)
T 1to2_E 198 VMAPGVSIQSTLPGN-------------KYGAYNGTSMASPHVAGAAALILSKHPNWTNTQVRSSLENTTTKLG------ 258 (281)
T ss_dssp EEEECSSEEEEETTT-------------EEEEECBHHHHHHHHHHHHHHHHHHSTTCCHHHHHHHHHTTCBCCS------
T ss_pred EEecCCCeEeecCCC-------------CEEecCcHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHhhCcccC------
Confidence 999999999999865 8999999999999999999999999999999999999999999753
Q ss_pred ccCCCCCcCCCCCccccccCccccCCC
Q 003970 593 LAGGSMKVSDPFDIGAGHINPMKAMDP 619 (782)
Q Consensus 593 ~~~~~~~~~~~~~~G~G~vn~~~Al~~ 619 (782)
+++.||||+||+.+|+++
T Consensus 259 ---------~~~~~G~G~v~~~~a~~~ 276 (281)
T 1to2_E 259 ---------DSFYYGKGLINVQAAAQH 276 (281)
T ss_dssp ---------CHHHHTTCBCCHHHHTSS
T ss_pred ---------CCCCcccceecHHHHhhh
Confidence 345899999999999985
No 14
>2x8j_A Intracellular subtilisin protease; hydrolase, serine protease, intracellular proteinase regulat; HET: CSX 1PE; 1.56A {Bacillus clausii} PDB: 2wv7_A 2wwt_A 2xrm_A*
Probab=100.00 E-value=8.6e-51 Score=439.91 Aligned_cols=273 Identities=25% Similarity=0.303 Sum_probs=218.6
Q ss_pred ccccccCCCCccCCCCCCCCCcEEEEeccccCCCCCCCCCCCCCCCCCCCccceeeccCcCCCCcccCcceeeeEecccc
Q 003970 116 MGLILDNTGEVTPVQLAYGDDIVVGIFDTGVWPESESFQEEPSMSPIPSSWKGTCVRGEKFDPQKACNRKLIGARYYVKG 195 (782)
Q Consensus 116 ~gl~~~~~~~~~~~~~~~G~gV~VgVIDtGId~~Hp~f~d~~~~~~~~~~~~g~~~~g~~f~~~~~~n~kiig~~~~~~~ 195 (782)
+++... +++.+|..+++|+||+|||||||||++||+|.+. +++.+.|..+
T Consensus 23 w~l~~i-~~~~aw~~~~~G~gv~VaViDtGid~~Hp~l~~~-----------------------------~~~~~~~~~~ 72 (327)
T 2x8j_A 23 MGVEIV-EAPAVWRASAKGAGQIIGVIDTGCQVDHPDLAER-----------------------------IIGGVNLTTD 72 (327)
T ss_dssp HHHHHT-THHHHHHHHGGGTTCEEEEEESCCCTTCTTTGGG-----------------------------EEEEEECSSG
T ss_pred cchhhc-ChHHHHhcCCCCCCCEEEEEcCCCCCCChhHhhc-----------------------------ccCCccccCC
Confidence 355544 6788999999999999999999999999999632 3334444433
Q ss_pred cccccCCCCCCCCCCCCCCCCCCCCchhhhhhhccccccCCcccccCCcceeeecCCCeEEEEEeeeCCCCCCCCCHHHH
Q 003970 196 FEEEYGPLNASTNREYRSARDFLGHGTHTASTAAGSIAKNAGFFGLGRGIARGGAPRARLAVYKICWGKDSDGKCTEADI 275 (782)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~D~~gHGTHVAgiaag~~~~~~~~~G~~~g~~~GVAP~A~l~~~kv~~~~~~~~~~~~~~i 275 (782)
+.. +.....|..||||||||||+|.. ++ ..+.||||+|+|+.+|+++..+ .+..+++
T Consensus 73 ~~~-----------~~~~~~d~~gHGT~VAgiia~~~-~~--------~g~~GvAp~a~l~~~kv~~~~g---~~~~~~i 129 (327)
T 2x8j_A 73 YGG-----------DETNFSDNNGHGTHVAGTVAAAE-TG--------SGVVGVAPKADLFIIKALSGDG---SGEMGWI 129 (327)
T ss_dssp GGG-----------CTTCCCCSSSHHHHHHHHHHCCC-CS--------SBCCCSSTTCEEEEEECSCTTS---EECHHHH
T ss_pred CCC-----------CCCCCCCCCCchHHHHHHHhccC-CC--------CCcEeeCCCCEEEEEEeECCCC---CcCHHHH
Confidence 211 11235688999999999999974 21 2358999999999999998765 5788999
Q ss_pred HHHHHHHhh------cCCcEEEecccCCCCCCCCccChHHHHHHhhhccCceEEEecCCCCCCC-----CCcccCCCceE
Q 003970 276 LAAFDDALH------DGVDVISASFGESPPLRPFFASNADIGSFNAMQHGVTVVFSGGNDGPEP-----SLVQNVAPWSI 344 (782)
Q Consensus 276 ~~ai~~a~~------~gvdVIn~SlG~~~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~G~~~-----~~~~~~ap~vi 344 (782)
++||+||++ .+++|||||||... ....+..++.++.++|++||+||||+|... ...+...+++|
T Consensus 130 ~~ai~~a~~~~~~~~~~~~Vin~S~G~~~-----~~~~~~~ai~~a~~~gi~vV~AAGN~g~~~~~~~~~~~Pa~~~~vi 204 (327)
T 2x8j_A 130 AKAIRYAVDWRGPKGEQMRIITMSLGGPT-----DSEELHDAVKYAVSNNVSVVCAAGNEGDGREDTNEFAYPAAYNEVI 204 (327)
T ss_dssp HHHHHHHHHCCCTTSCCCSEEEECEEBSC-----CCHHHHHHHHHHHHTTCEEEEECCCT---------TCBTTTSTTSE
T ss_pred HHHHHHHHhhcccccCCceEEEECCCcCC-----CCHHHHHHHHHHHHCCCeEEEEcCCCCCCCCCCCceeccccCCCEE
Confidence 999999999 89999999999874 235677788889999999999999999652 23344568999
Q ss_pred EecccccCcccceeEEeCCccEEEeeeeecccceeeEEEccccccCCccccCCCCCCCCCceEEEEeeCCCCccHHHHHH
Q 003970 345 CVAASSIDRTFPTEIVVNSDFSIVGESFISTEVKAKLVEAFTYFADGICKCENWMGRKATGRVVLCFSTMGSVKTEEAEA 424 (782)
Q Consensus 345 tVgAs~~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~lv~~~~~~~~~~c~~~~~~~~~~~gkiv~~~~g~~~~~~~~k~~ 424 (782)
+|||++.
T Consensus 205 ~Vga~~~------------------------------------------------------------------------- 211 (327)
T 2x8j_A 205 AVGAVDF------------------------------------------------------------------------- 211 (327)
T ss_dssp EEEEECT-------------------------------------------------------------------------
T ss_pred EEEEECC-------------------------------------------------------------------------
Confidence 9998542
Q ss_pred HHHHcCceEEEEecCCCccccccccccEEEEehhhHHHHHHHHhcCCCCcEEEEccCccccCCCCCCccccccCCCCCCC
Q 003970 425 AAKKANASGLIFAEPMTELIAEVDIIPTVRIDIAQGTQLRDYLAQFPRLPIVQLKPSKTSIGKVPAPTVAYFSSRGPSSI 504 (782)
Q Consensus 425 ~~~~~Ga~g~i~~n~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSS~Gp~~~ 504 (782)
.+.++.||++||.
T Consensus 212 -----------------------------------------------------------------~~~~~~fS~~G~~-- 224 (327)
T 2x8j_A 212 -----------------------------------------------------------------DLRLSDFTNTNEE-- 224 (327)
T ss_dssp -----------------------------------------------------------------TCCBSCC---CCC--
T ss_pred -----------------------------------------------------------------CCCCCCccCCCCC--
Confidence 3457899999985
Q ss_pred CCCCcccceeecCceEEeecCCCCCCCCCCCCCCccceeeeccccchhhHHHHHHHHHHHh-----CCCCCHHHHHHHHH
Q 003970 505 SPDILKPDITAPGIGVLAAWPPNTPPTLLPSDGRSVKWNFQSGTSMSCPHVSGVVALIKSA-----HPNWSPAAIRSALM 579 (782)
Q Consensus 505 ~~~~~KPDI~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~-----~P~lsp~~Ik~~L~ 579 (782)
|||+|||++|+++++.+ .|..++|||||||||||++|||+|+ +|.+++.+||++|+
T Consensus 225 ------~di~APG~~i~s~~~~~-------------~~~~~sGTS~AaP~VaG~aAll~~~~~~~~~p~ls~~~v~~~L~ 285 (327)
T 2x8j_A 225 ------IDIVAPGVGIKSTYLDS-------------GYAELSGTAMAAPHVAGALALIINLAEDAFKRSLSETEIYAQLV 285 (327)
T ss_dssp ------CSEEEECSSEEEECSTT-------------CEEEEESGGGTHHHHHHHHHHHHHHHHHHHTSCCCHHHHHHHHH
T ss_pred ------ceEecCcCceEeecCCC-------------CEEeecCHHHHHHHHHHHHHHHHHhhhhhcCCCCCHHHHHHHHH
Confidence 79999999999998865 7999999999999999999999999 99999999999999
Q ss_pred hccccCCCCCCccccCCCCCcCCCCCccccccCccccCCC
Q 003970 580 TTAYTRDTSHDSILAGGSMKVSDPFDIGAGHINPMKAMDP 619 (782)
Q Consensus 580 ~TA~~~~~~g~~~~~~~~~~~~~~~~~G~G~vn~~~Al~~ 619 (782)
+||+++.. ++..+|+|+||+.+|++.
T Consensus 286 ~tA~~~g~--------------~~~~~G~G~vd~~~A~~~ 311 (327)
T 2x8j_A 286 RRATPIGF--------------TAQAEGNGFLTLDLVERI 311 (327)
T ss_dssp TTEECCSS--------------CHHHHTTCEECTTHHHHH
T ss_pred HhCccCCC--------------CCCceeeeEECHHHHHHh
Confidence 99997531 456899999999999973
No 15
>1thm_A Thermitase; hydrolase(serine protease); 1.37A {Thermoactinomyces vulgaris} SCOP: c.41.1.1 PDB: 2tec_E 1tec_E 3tec_E
Probab=100.00 E-value=6.6e-50 Score=423.79 Aligned_cols=265 Identities=26% Similarity=0.322 Sum_probs=220.7
Q ss_pred cccccCCCCccCCCCCCCCCcEEEEeccccCCCCCCCCCCCCCCCCCCCccceeeccCcCCCCcccCcceeeeEeccccc
Q 003970 117 GLILDNTGEVTPVQLAYGDDIVVGIFDTGVWPESESFQEEPSMSPIPSSWKGTCVRGEKFDPQKACNRKLIGARYYVKGF 196 (782)
Q Consensus 117 gl~~~~~~~~~~~~~~~G~gV~VgVIDtGId~~Hp~f~d~~~~~~~~~~~~g~~~~g~~f~~~~~~n~kiig~~~~~~~~ 196 (782)
++... ++..+|... +|+||+|+|||||||++||+|.+. ++..+.|.++
T Consensus 14 ~l~~i-~~~~aw~~~-~G~gv~VaViDtGvd~~h~~l~~~-----------------------------~~~~~~~~~~- 61 (279)
T 1thm_A 14 GPQKI-QAPQAWDIA-EGSGAKIAIVDTGVQSNHPDLAGK-----------------------------VVGGWDFVDN- 61 (279)
T ss_dssp HHHHT-THHHHHTTC-CCTTCEEEEEESCCCTTCTTTTTT-----------------------------EEEEEETTTT-
T ss_pred ChhhC-ChHHHHhcC-CCCCCEEEEEccCCCCCCcchhcC-----------------------------ccccccccCC-
Confidence 44443 677899887 799999999999999999999632 3333334321
Q ss_pred ccccCCCCCCCCCCCCCCCCCCCCchhhhhhhccccccCCcccccCCcceeeecCCCeEEEEEeeeCCCCCCCCCHHHHH
Q 003970 197 EEEYGPLNASTNREYRSARDFLGHGTHTASTAAGSIAKNAGFFGLGRGIARGGAPRARLAVYKICWGKDSDGKCTEADIL 276 (782)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~D~~gHGTHVAgiaag~~~~~~~~~G~~~g~~~GVAP~A~l~~~kv~~~~~~~~~~~~~~i~ 276 (782)
...+.|..||||||||||+|...++. .+.||||+|+|+.+|+++..+ .+..++++
T Consensus 62 --------------~~~~~d~~gHGT~vAgiia~~~~n~~--------g~~GvAp~a~l~~~~v~~~~g---~~~~~~~~ 116 (279)
T 1thm_A 62 --------------DSTPQNGNGHGTHCAGIAAAVTNNST--------GIAGTAPKASILAVRVLDNSG---SGTWTAVA 116 (279)
T ss_dssp --------------BSCCCCSSSHHHHHHHHHHCCCSSSS--------SCCCSSTTCEEEEEECSCTTS---CCCHHHHH
T ss_pred --------------CCCCCCCCCcHHHHHHHHhCccCCCC--------ccEEeCCCCEEEEEEeeCCCC---CccHHHHH
Confidence 12457889999999999999864332 258999999999999998776 57889999
Q ss_pred HHHHHHhhcCCcEEEecccCCCCCCCCccChHHHHHHhhhccCceEEEecCCCCCCCCCcccCCCceEEecccccCcccc
Q 003970 277 AAFDDALHDGVDVISASFGESPPLRPFFASNADIGSFNAMQHGVTVVFSGGNDGPEPSLVQNVAPWSICVAASSIDRTFP 356 (782)
Q Consensus 277 ~ai~~a~~~gvdVIn~SlG~~~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~G~~~~~~~~~ap~vitVgAs~~d~~~~ 356 (782)
+||+||+++|++|||||||... ....+..++.++.++|+++|+||||+|......+...+++|+|||++.
T Consensus 117 ~ai~~a~~~g~~Vin~S~G~~~-----~~~~l~~ai~~a~~~gvlvV~AAGN~g~~~~~~Pa~~~~vi~Vga~~~----- 186 (279)
T 1thm_A 117 NGITYAADQGAKVISLSLGGTV-----GNSGLQQAVNYAWNKGSVVVAAAGNAGNTAPNYPAYYSNAIAVASTDQ----- 186 (279)
T ss_dssp HHHHHHHHTTCSEEEECCCBSS-----CCHHHHHHHHHHHHTTCEEEEECCSSSSCCCCBTTTSTTEEEEEEECT-----
T ss_pred HHHHHHHHCCCCEEEEecCCCC-----CCHHHHHHHHHHHHCCCEEEEeCCCCCCCCCCCcccCCCeEEEEEeCC-----
Confidence 9999999999999999999874 235677788889999999999999999776666677899999998542
Q ss_pred eeEEeCCccEEEeeeeecccceeeEEEccccccCCccccCCCCCCCCCceEEEEeeCCCCccHHHHHHHHHHcCceEEEE
Q 003970 357 TEIVVNSDFSIVGESFISTEVKAKLVEAFTYFADGICKCENWMGRKATGRVVLCFSTMGSVKTEEAEAAAKKANASGLIF 436 (782)
Q Consensus 357 ~~~~~~~~~~~~g~~~~~~~~~~~lv~~~~~~~~~~c~~~~~~~~~~~gkiv~~~~g~~~~~~~~k~~~~~~~Ga~g~i~ 436 (782)
T Consensus 187 -------------------------------------------------------------------------------- 186 (279)
T 1thm_A 187 -------------------------------------------------------------------------------- 186 (279)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ecCCCccccccccccEEEEehhhHHHHHHHHhcCCCCcEEEEccCccccCCCCCCccccccCCCCCCCCCCCcccceeec
Q 003970 437 AEPMTELIAEVDIIPTVRIDIAQGTQLRDYLAQFPRLPIVQLKPSKTSIGKVPAPTVAYFSSRGPSSISPDILKPDITAP 516 (782)
Q Consensus 437 ~n~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSS~Gp~~~~~~~~KPDI~AP 516 (782)
.+.++.||++||. |||+||
T Consensus 187 -----------------------------------------------------~~~~~~fS~~G~~--------~dv~AP 205 (279)
T 1thm_A 187 -----------------------------------------------------NDNKSSFSTYGSW--------VDVAAP 205 (279)
T ss_dssp -----------------------------------------------------TSCBCTTCCCCTT--------CCEEEE
T ss_pred -----------------------------------------------------CCCcCCcCCCCCc--------eEEEEc
Confidence 2356899999986 699999
Q ss_pred CceEEeecCCCCCCCCCCCCCCccceeeeccccchhhHHHHHHHHHHHhCCCCCHHHHHHHHHhccccCCCCCCccccCC
Q 003970 517 GIGVLAAWPPNTPPTLLPSDGRSVKWNFQSGTSMSCPHVSGVVALIKSAHPNWSPAAIRSALMTTAYTRDTSHDSILAGG 596 (782)
Q Consensus 517 G~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~P~lsp~~Ik~~L~~TA~~~~~~g~~~~~~~ 596 (782)
|++|+++++.+ .|..++|||||||||||++||| ++|.+++++||++|++||+++...+
T Consensus 206 G~~i~s~~~~~-------------~~~~~sGTS~AaP~VaG~aAll--~~p~~t~~~v~~~L~~ta~~~~~~~------- 263 (279)
T 1thm_A 206 GSSIYSTYPTS-------------TYASLSGTSMATPHVAGVAGLL--ASQGRSASNIRAAIENTADKISGTG------- 263 (279)
T ss_dssp CSSEEEEETTT-------------EEEEECSHHHHHHHHHHHHHHH--HTTTCCHHHHHHHHHHTCBCCTTBT-------
T ss_pred CCCeEEEeCCC-------------CEEEcccHHHHHHHHHHHHHHH--HCCCcCHHHHHHHHHHhCccCCCCC-------
Confidence 99999999875 8999999999999999999999 5899999999999999999865321
Q ss_pred CCCcCCCCCccccccCccccCC
Q 003970 597 SMKVSDPFDIGAGHINPMKAMD 618 (782)
Q Consensus 597 ~~~~~~~~~~G~G~vn~~~Al~ 618 (782)
..||+|+||+.+|++
T Consensus 264 -------~~~G~G~vn~~~A~~ 278 (279)
T 1thm_A 264 -------TYWAKGRVNAYKAVQ 278 (279)
T ss_dssp -------TTBSSEECCHHHHHH
T ss_pred -------ccccCCeeCHHHHhc
Confidence 469999999999975
No 16
>4h6x_A Thiazoline oxidase/subtilisin-like protease; hydrolase; 2.00A {Prochloron didemni} PDB: 4aks_A 4akt_A
Probab=100.00 E-value=2.5e-51 Score=449.69 Aligned_cols=312 Identities=23% Similarity=0.202 Sum_probs=197.6
Q ss_pred CCccCCCCCCCCCcEEEEeccccCCCCCCCCCCCCCCCCCCCccceeeccCcCCCCcccCcceeeeEecccccccccCCC
Q 003970 124 GEVTPVQLAYGDDIVVGIFDTGVWPESESFQEEPSMSPIPSSWKGTCVRGEKFDPQKACNRKLIGARYYVKGFEEEYGPL 203 (782)
Q Consensus 124 ~~~~~~~~~~G~gV~VgVIDtGId~~Hp~f~d~~~~~~~~~~~~g~~~~g~~f~~~~~~n~kiig~~~~~~~~~~~~~~~ 203 (782)
+.++|..+..|++|+|||||||||++||+|++.. ..+....|+..++...... ...+..+.... ..+........
T Consensus 20 ~~~~w~~~~g~~~V~VaViDtGiD~~Hpdf~g~~-~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~--~~~~~~~~~~~ 94 (357)
T 4h6x_A 20 LADLHNQTLGDPQITIVIIDGDPDYTLSCFEGAE-VSKVFPYWHEPAEPITPED--YAAFQSIRDQG--LKGKEKEEALE 94 (357)
T ss_dssp HHHHHHHCSCCTTSEEEEEESCCCTTSGGGTTCE-EEECCCTTSCCCCCCCHHH--HHHHHHHHHHT--CCSHHHHHHHH
T ss_pred HHHHHHhcCCCCCCEEEEEcCCCCCCChhHcCCC-cccccccccccccccCccc--ccccccccCcc--ccccccccccc
Confidence 4569999999999999999999999999998765 5555556665443221000 00000000000 00000000000
Q ss_pred CCCCCCCCCCCCCCCCCchhhhhhhccccccCCcccccCCcceeeecCCCeEEEEEeeeCCCCC--CCCCHHHHHHHHHH
Q 003970 204 NASTNREYRSARDFLGHGTHTASTAAGSIAKNAGFFGLGRGIARGGAPRARLAVYKICWGKDSD--GKCTEADILAAFDD 281 (782)
Q Consensus 204 ~~~~~~~~~~~~D~~gHGTHVAgiaag~~~~~~~~~G~~~g~~~GVAP~A~l~~~kv~~~~~~~--~~~~~~~i~~ai~~ 281 (782)
....+..++.|.+||||||||||||+..+ .+.||||+|+|+.+|++...... ..+...++++||+|
T Consensus 95 --~~~~~~~~~~D~~gHGThVAGiiag~~~~----------g~~GvAp~a~l~~~k~~~~~~~~~~~~~~~~~~~~ai~~ 162 (357)
T 4h6x_A 95 --AVIPDTKDRIVLNDHACHVTSTIVGQEHS----------PVFGIAPNCRVINMPQDAVIRGNYDDVMSPLNLARAIDL 162 (357)
T ss_dssp --HHCTTTHHHHHHHHHHHHHHHHHHCCTTS----------SCCCSCTTSEEEEEECTTC----------CHHHHHHHHH
T ss_pred --cccCCCCCCcCCCCcHHHHHHHHhccCCC----------CceEeeccceEEeeeecccCCCCccccccHHHHHHHHHH
Confidence 00001224557889999999999997422 35899999999999997543210 12455678999999
Q ss_pred HhhcCCcEEEecccCCCCCCCCccChHHHHHHhhhccCceEEEecCCCCCCCCCcccCCCceEEecccccCcccceeEEe
Q 003970 282 ALHDGVDVISASFGESPPLRPFFASNADIGSFNAMQHGVTVVFSGGNDGPEPSLVQNVAPWSICVAASSIDRTFPTEIVV 361 (782)
Q Consensus 282 a~~~gvdVIn~SlG~~~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~G~~~~~~~~~ap~vitVgAs~~d~~~~~~~~~ 361 (782)
|++.|++|||||||.... .....+.+..++.++.++|++||+||||+|......+...|++|+|||++.
T Consensus 163 a~~~g~~Vin~S~G~~~~-~~~~~~~~~~ai~~a~~~gv~vV~AAGN~g~~~~~~Pa~~~~vi~Vga~~~---------- 231 (357)
T 4h6x_A 163 ALELGANIIHCAFCRPTQ-TSEGEEILVQAIKKCQDNNVLIVSPTGNNSNESWCLPAVLPGTLAVGAAKV---------- 231 (357)
T ss_dssp HHHTTCSEEEEC------------CHHHHHHHHHHHTTCEEEEECC---------------CEEEEEECT----------
T ss_pred HHHcCCCEEeeccccCCc-cccchhHHHHHHHHHhhCCeEEEecccCCCCCcCcCcccCCCCceEEEecc----------
Confidence 999999999999998742 233456778888899999999999999999776666777899999998542
Q ss_pred CCccEEEeeeeecccceeeEEEccccccCCccccCCCCCCCCCceEEEEeeCCCCccHHHHHHHHHHcCceEEEEecCCC
Q 003970 362 NSDFSIVGESFISTEVKAKLVEAFTYFADGICKCENWMGRKATGRVVLCFSTMGSVKTEEAEAAAKKANASGLIFAEPMT 441 (782)
Q Consensus 362 ~~~~~~~g~~~~~~~~~~~lv~~~~~~~~~~c~~~~~~~~~~~gkiv~~~~g~~~~~~~~k~~~~~~~Ga~g~i~~n~~~ 441 (782)
T Consensus 232 -------------------------------------------------------------------------------- 231 (357)
T 4h6x_A 232 -------------------------------------------------------------------------------- 231 (357)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccccccccccEEEEehhhHHHHHHHHhcCCCCcEEEEccCccccCCCCCCccccccCCCCCCCCCCCcccceeecCceEE
Q 003970 442 ELIAEVDIIPTVRIDIAQGTQLRDYLAQFPRLPIVQLKPSKTSIGKVPAPTVAYFSSRGPSSISPDILKPDITAPGIGVL 521 (782)
Q Consensus 442 ~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSS~Gp~~~~~~~~KPDI~APG~~I~ 521 (782)
.+.++.||+||+.. .||||+|||++|+
T Consensus 232 ------------------------------------------------~~~~~~fSn~G~~~-----~~~di~APG~~i~ 258 (357)
T 4h6x_A 232 ------------------------------------------------DGTPCHFSNWGGNN-----TKEGILAPGEEIL 258 (357)
T ss_dssp ------------------------------------------------TSSBCTTCC---CT-----TTTEEEEECSSEE
T ss_pred ------------------------------------------------CCcccccccCCCCC-----CccceeecCCCeE
Confidence 34578999999753 4899999999999
Q ss_pred eecCCCCCCCCCCCCCCccceeeeccccchhhHHHHHHHHHHHh----CCCCCHHHHHHHHHhccccCCCCCCccccCCC
Q 003970 522 AAWPPNTPPTLLPSDGRSVKWNFQSGTSMSCPHVSGVVALIKSA----HPNWSPAAIRSALMTTAYTRDTSHDSILAGGS 597 (782)
Q Consensus 522 sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~----~P~lsp~~Ik~~L~~TA~~~~~~g~~~~~~~~ 597 (782)
++++.+. .|..++|||||||||||++|||+++ +|.|+++|||++|++||++++...
T Consensus 259 s~~~~~~------------~~~~~sGTS~AaP~vaG~~All~s~~~~~~~~lt~~~v~~~L~~tA~~~~~~~-------- 318 (357)
T 4h6x_A 259 GAQPCTE------------EPVRLTGTSMAAPVMTGISALLMSLQVQQGKPVDAEAVRTALLKTAIPCDPEV-------- 318 (357)
T ss_dssp ECCTTCS------------CCEEECSHHHHHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHC----------------
T ss_pred eccCCCC------------cccccCcHHHHHHHHHHHHHHHHHhhHhhCCCCCHHHHHHHHHhhCccCCCCC--------
Confidence 9988652 5778999999999999999999965 568999999999999999865321
Q ss_pred CCcCCCCCccccccCccccCC
Q 003970 598 MKVSDPFDIGAGHINPMKAMD 618 (782)
Q Consensus 598 ~~~~~~~~~G~G~vn~~~Al~ 618 (782)
...+.+||+|+||+.+|++
T Consensus 319 --~~~~~~~G~G~vn~~~A~~ 337 (357)
T 4h6x_A 319 --VEEPERCLRGFVNIPGAMK 337 (357)
T ss_dssp --------CTTCBCCHHHHHH
T ss_pred --CCCcccceeEEecHHHHHH
Confidence 2245689999999999997
No 17
>2ixt_A 36KDA protease; serine protease, sphericase, subtilisin like protease, hydrolase; 0.8A {Bacillus sphaericus} SCOP: c.41.1.1 PDB: 3d43_A 1ea7_A* 2gko_A*
Probab=100.00 E-value=2.6e-49 Score=426.39 Aligned_cols=288 Identities=29% Similarity=0.327 Sum_probs=225.2
Q ss_pred cccccCCCCccCCCCCCCCCcEEEEeccccCCCCCCCCCCCCCCCCCCCccceeeccCcCCCCcccCcceeeeEeccccc
Q 003970 117 GLILDNTGEVTPVQLAYGDDIVVGIFDTGVWPESESFQEEPSMSPIPSSWKGTCVRGEKFDPQKACNRKLIGARYYVKGF 196 (782)
Q Consensus 117 gl~~~~~~~~~~~~~~~G~gV~VgVIDtGId~~Hp~f~d~~~~~~~~~~~~g~~~~g~~f~~~~~~n~kiig~~~~~~~~ 196 (782)
++..+ +++.+|..+++|+||+|+|||||||++||+|.+. +...+.|....
T Consensus 9 ~l~~i-~~~~~w~~~~~G~gv~VaViDtGvd~~H~~l~~~-----------------------------~~~~~~~~~~~ 58 (310)
T 2ixt_A 9 GIKAI-YNNDTLTSTTGGSGINIAVLDTGVNTSHPDLVNN-----------------------------VEQCKDFTGAT 58 (310)
T ss_dssp HHHHH-HTCTTCCCCCCCTTCEEEEEESCCCTTCTTTTTT-----------------------------EEEEEESSSSS
T ss_pred chhhc-CchhhhhccCCCCCcEEEEEecCCCCCCHHHhhc-----------------------------ccccccccCCC
Confidence 44443 6788999999999999999999999999999643 22233333221
Q ss_pred ccccCCCCCCCCCCCCCCCCCCCCchhhhhhhccccccCCcccccCCcceeeecCCCeEEEEEeeeCCCCCCCCCHHHHH
Q 003970 197 EEEYGPLNASTNREYRSARDFLGHGTHTASTAAGSIAKNAGFFGLGRGIARGGAPRARLAVYKICWGKDSDGKCTEADIL 276 (782)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~D~~gHGTHVAgiaag~~~~~~~~~G~~~g~~~GVAP~A~l~~~kv~~~~~~~~~~~~~~i~ 276 (782)
. .......|..||||||||||+|.... ....+.||||+|+|+.+|++...+ .+..++++
T Consensus 59 ~-----------~~~~~~~d~~gHGT~vAgiia~~~~~-------n~~g~~GvAp~a~l~~~~v~~~~g---~~~~~~~~ 117 (310)
T 2ixt_A 59 T-----------PINNSCTDRNGHGTHVAGTALADGGS-------DQAGIYGVAPDADLWAYKVLLDSG---SGYSDDIA 117 (310)
T ss_dssp S-----------CEETCCCCSSSHHHHHHHHHHCBCCT-------TSCSCBCSCTTSEEEEEECSCTTS---CCCHHHHH
T ss_pred C-----------CCCCCCCCCCCCHHHHHHHHhccCCC-------CCCceEEECCCCEEEEEEEEcCCC---CCcHHHHH
Confidence 0 01124567899999999999997521 122358999999999999998776 47889999
Q ss_pred HHHHHHhhcCC-----cEEEecccCCCCCCCCccChHHHHHHhhhccCceEEEecCCCCCCCCC--cccCCCceEEeccc
Q 003970 277 AAFDDALHDGV-----DVISASFGESPPLRPFFASNADIGSFNAMQHGVTVVFSGGNDGPEPSL--VQNVAPWSICVAAS 349 (782)
Q Consensus 277 ~ai~~a~~~gv-----dVIn~SlG~~~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~G~~~~~--~~~~ap~vitVgAs 349 (782)
+||+||+++++ +|||||||... ....+..++.++.++|++||+||||+|....+ .+...+++|+|||+
T Consensus 118 ~ai~~a~~~~~~~~~~~Vin~S~G~~~-----~~~~~~~ai~~a~~~gv~vV~AAGN~g~~~~~~~~Pa~~~~vi~Vga~ 192 (310)
T 2ixt_A 118 AAIRHAADQATATGTKTIISMSLGSSA-----NNSLISSAVNYAYSKGVLIVAAAGNSGYSQGTIGYPGALPNAIAVAAL 192 (310)
T ss_dssp HHHHHHHHHHHHHTCCEEEEECCCBSS-----CCHHHHHHHHHHHHTTCEEEEECCSCCSSTTCCCBTTTSTTSEEEEEE
T ss_pred HHHHHHHHhhhccCCCeEEEEcCCCCC-----CCHHHHHHHHHHHhCCcEEEEcCCCCCCCCCCCCCcccCCCeeEEEec
Confidence 99999999988 99999999874 24567778888999999999999999976433 34456999999985
Q ss_pred ccCcccceeEEeCCccEEEeeeeecccceeeEEEccccccCCccccCCCCCCCCCceEEEEeeCCCCccHHHHHHHHHHc
Q 003970 350 SIDRTFPTEIVVNSDFSIVGESFISTEVKAKLVEAFTYFADGICKCENWMGRKATGRVVLCFSTMGSVKTEEAEAAAKKA 429 (782)
Q Consensus 350 ~~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~lv~~~~~~~~~~c~~~~~~~~~~~gkiv~~~~g~~~~~~~~k~~~~~~~ 429 (782)
+...
T Consensus 193 ~~~~---------------------------------------------------------------------------- 196 (310)
T 2ixt_A 193 ENVQ---------------------------------------------------------------------------- 196 (310)
T ss_dssp EEEE----------------------------------------------------------------------------
T ss_pred cccc----------------------------------------------------------------------------
Confidence 4100
Q ss_pred CceEEEEecCCCccccccccccEEEEehhhHHHHHHHHhcCCCCcEEEEccCccccCCCCCC--ccccccCCCCCCCC--
Q 003970 430 NASGLIFAEPMTELIAEVDIIPTVRIDIAQGTQLRDYLAQFPRLPIVQLKPSKTSIGKVPAP--TVAYFSSRGPSSIS-- 505 (782)
Q Consensus 430 Ga~g~i~~n~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~~i~~~~~~~~~~~~~--~~a~fSS~Gp~~~~-- 505 (782)
..+ .++.||++||....
T Consensus 197 -----------------------------------------------------------~~g~~~~~~~S~~G~~~~~g~ 217 (310)
T 2ixt_A 197 -----------------------------------------------------------QNGTYRVADYSSRGYISTAGD 217 (310)
T ss_dssp -----------------------------------------------------------ETTEEEECTTSCCCCTTTTTS
T ss_pred -----------------------------------------------------------cCCCeeeccccCCCCccCCcc
Confidence 012 56889999995321
Q ss_pred --CCCcccceeecCceEEeecCCCCCCCCCCCCCCccceeeeccccchhhHHHHHHHHHHHhCCCCCHHHHHHHHHhccc
Q 003970 506 --PDILKPDITAPGIGVLAAWPPNTPPTLLPSDGRSVKWNFQSGTSMSCPHVSGVVALIKSAHPNWSPAAIRSALMTTAY 583 (782)
Q Consensus 506 --~~~~KPDI~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~P~lsp~~Ik~~L~~TA~ 583 (782)
..+.||||+|||++|+++++.+ .|..++|||||||||||++|||+|++|+|++.+||++|++||+
T Consensus 218 ~~~~~~~~di~ApG~~i~s~~~~~-------------~~~~~sGTS~AaP~vaG~aAll~~~~p~lt~~~v~~~L~~tA~ 284 (310)
T 2ixt_A 218 YVIQEGDIEISAPGSSVYSTWYNG-------------GYNTISGTSMATPHVSGLAAKIWAENPSLSNTQLRSNLQERAK 284 (310)
T ss_dssp SSCCTTCCCEEEECSSEEEECTTS-------------SEEEECSHHHHHHHHHHHHHHHHHHSTTCCHHHHHHHHHHHHH
T ss_pred ccccCCCeeEECCCCCEeeecCCC-------------CEEeeccHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHhhCc
Confidence 1235999999999999998865 8999999999999999999999999999999999999999999
Q ss_pred cCCCCCCccccCCCCCcCCCCCccccccCc
Q 003970 584 TRDTSHDSILAGGSMKVSDPFDIGAGHINP 613 (782)
Q Consensus 584 ~~~~~g~~~~~~~~~~~~~~~~~G~G~vn~ 613 (782)
+.+..+. ....+.++..+|||++|+
T Consensus 285 ~~~~~~~-----~~a~~g~d~~~G~G~~~v 309 (310)
T 2ixt_A 285 SVDIKGG-----YGAAIGDDYASGFGFARV 309 (310)
T ss_dssp TSCCCBS-----TTCCSSSBTTTBTCBCCC
T ss_pred ccCCCCC-----cccccCCccccccceeec
Confidence 8764321 122345778999999986
No 18
>2z30_A TK-subtilisin; thermococcus kodakaraensis, hydrolase; 1.65A {Thermococcus kodakarensis} PDB: 3a3o_A 3a3n_A 2zrq_A 2z57_A 2z56_A 2z58_A 3a3p_A 2z2x_A* 2z2y_A
Probab=100.00 E-value=1.1e-49 Score=430.58 Aligned_cols=272 Identities=27% Similarity=0.338 Sum_probs=220.7
Q ss_pred cccccCCCCccCCCCCCCC--CcEEEEeccccCCCCCCCCCCCCCCCCCCCccceeeccCcCCCCcccCcceeeeEeccc
Q 003970 117 GLILDNTGEVTPVQLAYGD--DIVVGIFDTGVWPESESFQEEPSMSPIPSSWKGTCVRGEKFDPQKACNRKLIGARYYVK 194 (782)
Q Consensus 117 gl~~~~~~~~~~~~~~~G~--gV~VgVIDtGId~~Hp~f~d~~~~~~~~~~~~g~~~~g~~f~~~~~~n~kiig~~~~~~ 194 (782)
++..+ +++.+|..+ +|+ ||+|+|||||||++||+|.+. +.....|..
T Consensus 11 ~l~~i-~~~~aw~~~-~G~~~gv~VaViDtGid~~Hp~l~~~-----------------------------~~~~~~~~~ 59 (320)
T 2z30_A 11 GIERV-KAPSVWSIT-DGSVSVIQVAVLDTGVDYDHPDLAAN-----------------------------IAWCVSTLR 59 (320)
T ss_dssp HHHHT-TCGGGTTTC-CSCCTTCEEEEEESCBCTTCTTTGGG-----------------------------EEEEEECGG
T ss_pred Chhhc-ChHHHHHhc-CCCcCCeEEEEECCCCCCCChhHhcc-----------------------------cccCccccC
Confidence 45444 778899988 999 999999999999999999642 222222322
Q ss_pred ccccccCCCCCCCCCCCCCCCCCCCCchhhhhhhccccccCCcccccCCcceeeecCCCeEEEEEeeeCCCCCCCCCHHH
Q 003970 195 GFEEEYGPLNASTNREYRSARDFLGHGTHTASTAAGSIAKNAGFFGLGRGIARGGAPRARLAVYKICWGKDSDGKCTEAD 274 (782)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~D~~gHGTHVAgiaag~~~~~~~~~G~~~g~~~GVAP~A~l~~~kv~~~~~~~~~~~~~~ 274 (782)
+... ....+..|..||||||||||+|.. + ...+.||||+|+|+.+|+++..+ .+..++
T Consensus 60 ~~~~----------~~~~~~~d~~gHGT~vAgiia~~~-n--------~~g~~GvAp~a~l~~~~v~~~~g---~~~~~~ 117 (320)
T 2z30_A 60 GKVS----------TKLRDCADQNGHGTHVIGTIAALN-N--------DIGVVGVAPGVQIYSVRVLDARG---SGSYSD 117 (320)
T ss_dssp GCCB----------CCHHHHBCSSSHHHHHHHHHHCCS-S--------SBSCCCSSTTCEEEEEECSCTTS---EEEHHH
T ss_pred CccC----------CCCCCCCCCCCCHHHHHHHHHccc-C--------CCceEeeCCCCEEEEEEeeCCCC---CccHHH
Confidence 1100 001124578999999999999973 1 12358999999999999998766 578899
Q ss_pred HHHHHHHHhhc--------------------CCcEEEecccCCCCCCCCccChHHHHHHhhhccCceEEEecCCCCCCCC
Q 003970 275 ILAAFDDALHD--------------------GVDVISASFGESPPLRPFFASNADIGSFNAMQHGVTVVFSGGNDGPEPS 334 (782)
Q Consensus 275 i~~ai~~a~~~--------------------gvdVIn~SlG~~~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~G~~~~ 334 (782)
+++||+||+++ +++|||||||... ....+..++.++.++|++||+||||+|....
T Consensus 118 i~~ai~~a~~~~~~~~~~~~~~~~~~~~~~~~~~Vin~S~G~~~-----~~~~~~~ai~~a~~~gi~vV~AAGN~g~~~~ 192 (320)
T 2z30_A 118 IAIGIEQAILGPDGVADKDGDGIIAGDPDDDAAEVISMSLGGPA-----DDSYLYDMIIQAYNAGIVIVAASGNEGAPSP 192 (320)
T ss_dssp HHHHHHHHHHTTTTCSCTTSSSCCTTCTTSCCCSEEEECEEBSC-----CCHHHHHHHHHHHHTTCEEEEECCSSCCSSC
T ss_pred HHHHHHHHHhCcccccccccccccccccccCCceEEEecCCCCC-----CCHHHHHHHHHHHHCCCEEEEeCCCCCCCCC
Confidence 99999999987 9999999999874 2356677788899999999999999998766
Q ss_pred CcccCCCceEEecccccCcccceeEEeCCccEEEeeeeecccceeeEEEccccccCCccccCCCCCCCCCceEEEEeeCC
Q 003970 335 LVQNVAPWSICVAASSIDRTFPTEIVVNSDFSIVGESFISTEVKAKLVEAFTYFADGICKCENWMGRKATGRVVLCFSTM 414 (782)
Q Consensus 335 ~~~~~ap~vitVgAs~~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~lv~~~~~~~~~~c~~~~~~~~~~~gkiv~~~~g~ 414 (782)
..+...|++|+|||++.
T Consensus 193 ~~Pa~~~~vi~Vga~~~--------------------------------------------------------------- 209 (320)
T 2z30_A 193 SYPAAYPEVIAVGAIDS--------------------------------------------------------------- 209 (320)
T ss_dssp CBTTTSTTEEEEEEECT---------------------------------------------------------------
T ss_pred CCcccCCCeEEEEeeCC---------------------------------------------------------------
Confidence 66677899999998541
Q ss_pred CCccHHHHHHHHHHcCceEEEEecCCCccccccccccEEEEehhhHHHHHHHHhcCCCCcEEEEccCccccCCCCCCccc
Q 003970 415 GSVKTEEAEAAAKKANASGLIFAEPMTELIAEVDIIPTVRIDIAQGTQLRDYLAQFPRLPIVQLKPSKTSIGKVPAPTVA 494 (782)
Q Consensus 415 ~~~~~~~k~~~~~~~Ga~g~i~~n~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a 494 (782)
.+.++
T Consensus 210 ---------------------------------------------------------------------------~~~~~ 214 (320)
T 2z30_A 210 ---------------------------------------------------------------------------NDNIA 214 (320)
T ss_dssp ---------------------------------------------------------------------------TSCBC
T ss_pred ---------------------------------------------------------------------------CCCcC
Confidence 24568
Q ss_pred cccCCCCCCCCCCCcccceeecCceEEeecCCCCCCCCCCCCCCccceeeeccccchhhHHHHHHHHHHHhC--------
Q 003970 495 YFSSRGPSSISPDILKPDITAPGIGVLAAWPPNTPPTLLPSDGRSVKWNFQSGTSMSCPHVSGVVALIKSAH-------- 566 (782)
Q Consensus 495 ~fSS~Gp~~~~~~~~KPDI~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~-------- 566 (782)
.||++|| +|+|||++|+++++.+ .|..++|||||||||||++|||+|++
T Consensus 215 ~~S~~g~----------~v~APG~~i~s~~~~~-------------~~~~~sGTS~AaP~vaG~aAll~~~~~~~~~~~~ 271 (320)
T 2z30_A 215 SFSNRQP----------EVSAPGVDILSTYPDD-------------SYETLMGTAMATPHVSGVVALIQAAYYQKYGKIL 271 (320)
T ss_dssp TTSCSSC----------SEEEECSSEEEEETTT-------------EEEEECSHHHHHHHHHHHHHHHHHHHHHHHSSCC
T ss_pred cccCCCC----------CEEeCCCCeEEeccCC-------------CeEeccCHHHHHHHHHHHHHHHHHhchhhccccc
Confidence 9999996 6899999999999865 89999999999999999999999999
Q ss_pred -----CCCCHHHHHHHHHhccccCCCCCCccccCCCCCcCCCCCccccccCccccCCC
Q 003970 567 -----PNWSPAAIRSALMTTAYTRDTSHDSILAGGSMKVSDPFDIGAGHINPMKAMDP 619 (782)
Q Consensus 567 -----P~lsp~~Ik~~L~~TA~~~~~~g~~~~~~~~~~~~~~~~~G~G~vn~~~Al~~ 619 (782)
|.|++.+||++|++||+++... ..+..||||+||+.+|++.
T Consensus 272 ~~~~~p~lt~~~v~~~L~~ta~~~~~~------------g~~~~~G~G~vd~~~A~~~ 317 (320)
T 2z30_A 272 PVGTFDDISKNTVRGILHITADDLGPT------------GWDADYGYGVVRAALAVQA 317 (320)
T ss_dssp CCCCTTCCSTTSHHHHHHHHSBCCSSS------------SSBTTTBTCBCCHHHHHHH
T ss_pred ccccCCCCCHHHHHHHHHhhCccCCCC------------CCCCCcCCceeCHHHHHHH
Confidence 9999999999999999976432 2456799999999999874
No 19
>3zxy_A Subtilisin-like protein; hydrolase; 1.58A {Prochloron didemni} PDB: 3zxx_A
Probab=100.00 E-value=6.6e-50 Score=425.13 Aligned_cols=267 Identities=27% Similarity=0.255 Sum_probs=210.1
Q ss_pred CCCC-CCcEEEEeccccCCCCCCCCCCCCCCCCCCCccceeeccCcCCCCcccCcceeeeEecccccccccCCCCCCCCC
Q 003970 131 LAYG-DDIVVGIFDTGVWPESESFQEEPSMSPIPSSWKGTCVRGEKFDPQKACNRKLIGARYYVKGFEEEYGPLNASTNR 209 (782)
Q Consensus 131 ~~~G-~gV~VgVIDtGId~~Hp~f~d~~~~~~~~~~~~g~~~~g~~f~~~~~~n~kiig~~~~~~~~~~~~~~~~~~~~~ 209 (782)
.++| +||+|||||||||++||+|++.. +.+..++.. .
T Consensus 3 ~l~G~~gV~VaViDtGid~~Hpdl~g~~----------------------------~~~~~~~~~--------------~ 40 (282)
T 3zxy_A 3 SLKGDHNIRVAILDGPVDIAHPCFQGAD----------------------------LTVLPTLAP--------------T 40 (282)
T ss_dssp TCCCCTTSEEEEEESCCCTTSGGGTTCE----------------------------EEECCCSSC--------------C
T ss_pred CCcCCCCCEEEEEcCCCCCCChhHCCCe----------------------------eecCcCCCC--------------C
Confidence 3578 79999999999999999997432 011011100 0
Q ss_pred CCCCCCCCCCCchhhhhhhccccccCCcccccCCcceeeecCCCeEEEEEeeeCCCCCCCCCHHHHHHHHHHHhhcCCcE
Q 003970 210 EYRSARDFLGHGTHTASTAAGSIAKNAGFFGLGRGIARGGAPRARLAVYKICWGKDSDGKCTEADILAAFDDALHDGVDV 289 (782)
Q Consensus 210 ~~~~~~D~~gHGTHVAgiaag~~~~~~~~~G~~~g~~~GVAP~A~l~~~kv~~~~~~~~~~~~~~i~~ai~~a~~~gvdV 289 (782)
......|.+||||||||||+|+..+ .+.||||+|+|+.+|++.+... .....++++||+||++++++|
T Consensus 41 ~~~~d~~~~gHGT~VAGiiag~~~~----------~~~GvAp~a~l~~~kv~~~~~~--~~~~~~i~~ai~~a~~~~~~V 108 (282)
T 3zxy_A 41 AARSDGFMSAHGTHVASIIFGQPET----------SVPGIAPQCRGLIVPIFSDDRR--RITQLDLARGIERAVNAGAHI 108 (282)
T ss_dssp CCCTTCHHHHHHHHHHHHHHCCTTS----------SSCCSSTTSEEEEEECSCSSSS--CCCHHHHHHHHHHHHHTTCSE
T ss_pred CCCCCCCCCCcccceeehhhccCCc----------eeeeeccccceEeeEeeccccc--cchHHHHHHHHHHhhccCCeE
Confidence 1122335679999999999997532 3589999999999999865542 467888999999999999999
Q ss_pred EEecccCCCCCCCCccChHHHHHHhhhccCceEEEecCCCCCCCCCcccCCCceEEecccccCcccceeEEeCCccEEEe
Q 003970 290 ISASFGESPPLRPFFASNADIGSFNAMQHGVTVVFSGGNDGPEPSLVQNVAPWSICVAASSIDRTFPTEIVVNSDFSIVG 369 (782)
Q Consensus 290 In~SlG~~~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~G~~~~~~~~~ap~vitVgAs~~d~~~~~~~~~~~~~~~~g 369 (782)
||||||.... .......+..++..+.++|+++|+||||+|......+...+++|+|||++.
T Consensus 109 in~S~G~~~~-~~~~~~~~~~ai~~a~~~gi~vV~AaGN~g~~~~~~Pa~~~~vi~Vga~~~------------------ 169 (282)
T 3zxy_A 109 INISGGELTD-FGEADGWLENAVSLCRQNNVLLVAAAGNNGCDCLHVPAALPAVLAVGAMDD------------------ 169 (282)
T ss_dssp EEECCCEEES-SSCCCHHHHHHHHHHHHTTCEEEEECCSSCSSCEEETTTSTTCEEEEEECT------------------
T ss_pred EeccCccccc-cccccHHHHHHHHHHhhcCceEEEecccCCCccccCccccceeEEEEEEcC------------------
Confidence 9999997631 222344567788889999999999999999877666777899999998541
Q ss_pred eeeecccceeeEEEccccccCCccccCCCCCCCCCceEEEEeeCCCCccHHHHHHHHHHcCceEEEEecCCCcccccccc
Q 003970 370 ESFISTEVKAKLVEAFTYFADGICKCENWMGRKATGRVVLCFSTMGSVKTEEAEAAAKKANASGLIFAEPMTELIAEVDI 449 (782)
Q Consensus 370 ~~~~~~~~~~~lv~~~~~~~~~~c~~~~~~~~~~~gkiv~~~~g~~~~~~~~k~~~~~~~Ga~g~i~~n~~~~~~~~~~~ 449 (782)
T Consensus 170 -------------------------------------------------------------------------------- 169 (282)
T 3zxy_A 170 -------------------------------------------------------------------------------- 169 (282)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccEEEEehhhHHHHHHHHhcCCCCcEEEEccCccccCCCCCCccccccCCCCCCCCCCCcccceeecCceEEeecCCCCC
Q 003970 450 IPTVRIDIAQGTQLRDYLAQFPRLPIVQLKPSKTSIGKVPAPTVAYFSSRGPSSISPDILKPDITAPGIGVLAAWPPNTP 529 (782)
Q Consensus 450 ~p~~~i~~~~g~~l~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSS~Gp~~~~~~~~KPDI~APG~~I~sa~~~~~~ 529 (782)
.+.++.||+||+. ..||||+|||++|+++++.+
T Consensus 170 ----------------------------------------~~~~~~~S~~~~~-----~~~~di~ApG~~i~s~~~~~-- 202 (282)
T 3zxy_A 170 ----------------------------------------HGHPLDFSNWGST-----YEQQGILAPGEDILGAKPGG-- 202 (282)
T ss_dssp ----------------------------------------TSCBCSSSCCCHH-----HHHHEEEEECSSEEEECTTS--
T ss_pred ----------------------------------------CCccccccCCCCC-----ccccceeccCcceeeecCCC--
Confidence 3456889999875 46899999999999999876
Q ss_pred CCCCCCCCCccceeeeccccchhhHHHHHHHHHHHhC----CCCCHHHHHHHHHhccccCCCCCCccccCCCCCcCCCCC
Q 003970 530 PTLLPSDGRSVKWNFQSGTSMSCPHVSGVVALIKSAH----PNWSPAAIRSALMTTAYTRDTSHDSILAGGSMKVSDPFD 605 (782)
Q Consensus 530 ~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~----P~lsp~~Ik~~L~~TA~~~~~~g~~~~~~~~~~~~~~~~ 605 (782)
.|..++|||||||||||++|||+|++ |.++|++||++|++||++++... +.....
T Consensus 203 -----------~~~~~sGTS~AaP~vaG~aAll~~~~~~~~~~~~~~~vk~~L~~tA~~~~~~~----------~~~~~~ 261 (282)
T 3zxy_A 203 -----------GTERLSGTAFATPIVSGVAALLLSEQVRRGETPDPQKVRQLLLQSALPCDDDA----------PEQARR 261 (282)
T ss_dssp -----------CEEEECSHHHHHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHCBCC-----------------CGG
T ss_pred -----------ceeecCCCcccchHHHHHHHHHHHHhHhhCCCCCHHHHHHHHHhhCeeCCCCC----------CCccCc
Confidence 89999999999999999999999975 78999999999999999765321 234567
Q ss_pred ccccccCccccCC
Q 003970 606 IGAGHINPMKAMD 618 (782)
Q Consensus 606 ~G~G~vn~~~Al~ 618 (782)
+|+|+||+.+|++
T Consensus 262 ~G~G~ln~~~A~~ 274 (282)
T 3zxy_A 262 CLAGRLNVSGAFT 274 (282)
T ss_dssp GTTCBCCHHHHHH
T ss_pred eeeeEeCHHHHHH
Confidence 9999999999986
No 20
>4h6w_A N-terminal cyanobactin protease; hydrolase; 2.45A {Planktothrix agardhii nies-596}
Probab=100.00 E-value=1e-49 Score=429.00 Aligned_cols=276 Identities=25% Similarity=0.258 Sum_probs=218.3
Q ss_pred CCCccCCCCCCCCCcEEEEeccccCCCCCCCCCCCCCCCCCCCccceeeccCcCCCCcccCcceeeeEecccccccccCC
Q 003970 123 TGEVTPVQLAYGDDIVVGIFDTGVWPESESFQEEPSMSPIPSSWKGTCVRGEKFDPQKACNRKLIGARYYVKGFEEEYGP 202 (782)
Q Consensus 123 ~~~~~~~~~~~G~gV~VgVIDtGId~~Hp~f~d~~~~~~~~~~~~g~~~~g~~f~~~~~~n~kiig~~~~~~~~~~~~~~ 202 (782)
+++++|+.+..++||+|||||||||++||+|.+.. +.+..++..+
T Consensus 9 G~~~aW~~~~G~~gV~VaViDtGid~~Hpdl~g~~----------------------------~~~~~~~~~~------- 53 (306)
T 4h6w_A 9 GLKKLWSETRGDPKICVAVLDGIVDQNHPCFIGAD----------------------------LTRLPSLVSG------- 53 (306)
T ss_dssp THHHHHHHCSCCTTCEEEEESSCCCTTSGGGTTCE----------------------------EEECC------------
T ss_pred CHHHHHhhhCCCCCCEEEEEcCCCCCCChhHcCCc----------------------------ccCCCcccCC-------
Confidence 34569998877799999999999999999997432 1111111111
Q ss_pred CCCCCCCCCCCCCCCCCCchhhhhhhccccccCCcccccCCcceeeecCCCeEEEEEeeeCCCCCCCCCHHHHHHHHHHH
Q 003970 203 LNASTNREYRSARDFLGHGTHTASTAAGSIAKNAGFFGLGRGIARGGAPRARLAVYKICWGKDSDGKCTEADILAAFDDA 282 (782)
Q Consensus 203 ~~~~~~~~~~~~~D~~gHGTHVAgiaag~~~~~~~~~G~~~g~~~GVAP~A~l~~~kv~~~~~~~~~~~~~~i~~ai~~a 282 (782)
+.....|.+||||||||||+|+.. +.+.||||+|+|+.+|++.+... .+....+++||+||
T Consensus 54 -------~~~~~~d~~gHGThVAGiiag~~~----------~~~~GVAp~a~l~~~kv~~~~~~--~~~~~~i~~ai~~a 114 (306)
T 4h6w_A 54 -------EANANGSMSTHGTHVASIIFGQHD----------SPVTGIAPQCRGLIVPVFADESL--KLSQLDLSRAIEQA 114 (306)
T ss_dssp ------------CCCCHHHHHHHHHHHCCTT----------SSSCCSSTTSEEEECCCCCSSSC--CCCHHHHHHHHHHH
T ss_pred -------CCCCCCCCCCchHHHHHHHHcccc----------CCcceeccccccceeeccccccc--cchHHHHHHHHHHh
Confidence 112334678999999999999742 23589999999999999876542 47788999999999
Q ss_pred hhcCCcEEEecccCCCCCCCCccChHHHHHHhhhccCceEEEecCCCCCCCCCcccCCCceEEecccccCcccceeEEeC
Q 003970 283 LHDGVDVISASFGESPPLRPFFASNADIGSFNAMQHGVTVVFSGGNDGPEPSLVQNVAPWSICVAASSIDRTFPTEIVVN 362 (782)
Q Consensus 283 ~~~gvdVIn~SlG~~~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~G~~~~~~~~~ap~vitVgAs~~d~~~~~~~~~~ 362 (782)
++++++|||+|||.... .......+..++..+.++|+++|++|||+|......+...+++|+|||++.
T Consensus 115 ~~~g~~vi~~s~g~~~~-~~~~~~~~~~ai~~a~~~gi~vvaaagn~g~~~~~~Pa~~~~vi~Vga~~~----------- 182 (306)
T 4h6w_A 115 VNNGANIINVSAGQLTD-AGEADTWLEKAIQLCQENNVLLIAATGNDGCECLHVPASLPTVLAVGAMDD----------- 182 (306)
T ss_dssp HHTTCSEEEECCCEEES-SSCCCHHHHHHHHHHHHTTCEEEEECCSSSSBCEEETTTSTTCEEEEEECT-----------
T ss_pred hcccceeeecccccccc-CCCccHHHHHHHHHHHHcCCeEEEecCCCCcccccccccCCcceEEEEecC-----------
Confidence 99999999999997532 223445577788889999999999999999776666666799999998542
Q ss_pred CccEEEeeeeecccceeeEEEccccccCCccccCCCCCCCCCceEEEEeeCCCCccHHHHHHHHHHcCceEEEEecCCCc
Q 003970 363 SDFSIVGESFISTEVKAKLVEAFTYFADGICKCENWMGRKATGRVVLCFSTMGSVKTEEAEAAAKKANASGLIFAEPMTE 442 (782)
Q Consensus 363 ~~~~~~g~~~~~~~~~~~lv~~~~~~~~~~c~~~~~~~~~~~gkiv~~~~g~~~~~~~~k~~~~~~~Ga~g~i~~n~~~~ 442 (782)
T Consensus 183 -------------------------------------------------------------------------------- 182 (306)
T 4h6w_A 183 -------------------------------------------------------------------------------- 182 (306)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cccccccccEEEEehhhHHHHHHHHhcCCCCcEEEEccCccccCCCCCCccccccCCCCCCCCCCCcccceeecCceEEe
Q 003970 443 LIAEVDIIPTVRIDIAQGTQLRDYLAQFPRLPIVQLKPSKTSIGKVPAPTVAYFSSRGPSSISPDILKPDITAPGIGVLA 522 (782)
Q Consensus 443 ~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSS~Gp~~~~~~~~KPDI~APG~~I~s 522 (782)
.+.+++||++|+. ..||||+|||++|++
T Consensus 183 -----------------------------------------------~~~~~~~s~~g~~-----~~~~di~APG~~i~s 210 (306)
T 4h6w_A 183 -----------------------------------------------QGKPVDFSNWGDA-----YQKQGILAPGKDILG 210 (306)
T ss_dssp -----------------------------------------------TSCBCSSSCBCHH-----HHHHEEEEECSSEEE
T ss_pred -----------------------------------------------CCCccccccccCC-----cCcceeecCCcCccc
Confidence 2356789999865 358999999999999
Q ss_pred ecCCCCCCCCCCCCCCccceeeeccccchhhHHHHHHHHHHHh----CCCCCHHHHHHHHHhccccCCCCCCccccCCCC
Q 003970 523 AWPPNTPPTLLPSDGRSVKWNFQSGTSMSCPHVSGVVALIKSA----HPNWSPAAIRSALMTTAYTRDTSHDSILAGGSM 598 (782)
Q Consensus 523 a~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~----~P~lsp~~Ik~~L~~TA~~~~~~g~~~~~~~~~ 598 (782)
+++.+ .|..++|||||||||||++|||+++ +|.|+|+|||++|++||+++...+.
T Consensus 211 ~~~~~-------------~~~~~sGTS~AaP~VaG~~All~s~~~~~~p~~t~~~v~~~L~~tA~~~~~~~~-------- 269 (306)
T 4h6w_A 211 AKPNG-------------GTIRLSGTSFATPIVSGVAALLLSLQIKRGEKPDPQKVKNALLASATPCNPKDT-------- 269 (306)
T ss_dssp ECTTS-------------CEEEECSHHHHHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHTCBCCCTTTC--------
T ss_pred ccCCC-------------ceeccCCCcchhHHHHHHHHHHHHHHHhhCCCCCHHHHHHHHHhhCccCCCCCC--------
Confidence 99876 8999999999999999999999865 6999999999999999998754331
Q ss_pred CcCCCCCccccccCccccCCC
Q 003970 599 KVSDPFDIGAGHINPMKAMDP 619 (782)
Q Consensus 599 ~~~~~~~~G~G~vn~~~Al~~ 619 (782)
.....||+|+||+.+|++.
T Consensus 270 --~~~~~~G~G~ln~~~Av~~ 288 (306)
T 4h6w_A 270 --DDQSRCLMGKLNILDAIEH 288 (306)
T ss_dssp --SCGGGGTTCBCCHHHHHHH
T ss_pred --CCCCCcceeecCHHHHHHH
Confidence 2334799999999999973
No 21
>2iy9_A SUBA; toxin, shiga, plasmid; 1.8A {Escherichia coli}
Probab=100.00 E-value=7.4e-49 Score=429.48 Aligned_cols=277 Identities=20% Similarity=0.135 Sum_probs=217.9
Q ss_pred cccccCCCCccCCCCCCCC--CcEEEEeccccCCCCCCCCCCCCCCCCCCCccceeeccCcCCCCcccCcceeeeEeccc
Q 003970 117 GLILDNTGEVTPVQLAYGD--DIVVGIFDTGVWPESESFQEEPSMSPIPSSWKGTCVRGEKFDPQKACNRKLIGARYYVK 194 (782)
Q Consensus 117 gl~~~~~~~~~~~~~~~G~--gV~VgVIDtGId~~Hp~f~d~~~~~~~~~~~~g~~~~g~~f~~~~~~n~kiig~~~~~~ 194 (782)
++... ++..+|.. .+|+ ||+||||||||| +||+|.+. ++..+.|..
T Consensus 26 ~l~~i-~~~~aw~~-~~G~~~gv~VaViDsGid-~Hp~l~~~-----------------------------~~~~~~~~~ 73 (347)
T 2iy9_A 26 YFDAI-GLTETTMS-LTDKNTPVVVSVVDSGVA-FIGGLSDS-----------------------------EFAKFSFTQ 73 (347)
T ss_dssp HHHHH-TCCHHHHH-TSCTTSCCEEEEEESCCC-CCGGGTTC-----------------------------EEEEEECBT
T ss_pred chhhC-ChHHHHHH-hcCCCCCCEEEEEcCCCc-CChhhhcC-----------------------------cccCCcccC
Confidence 34433 67789988 8999 999999999999 99999642 222333332
Q ss_pred ccccccCCCCCCCCCCCCCCCCCCCCchhhhhhhccccccCCcccccCCcceeeecCCCeEEEEEeeeCCCCCCCCCHHH
Q 003970 195 GFEEEYGPLNASTNREYRSARDFLGHGTHTASTAAGSIAKNAGFFGLGRGIARGGAPRARLAVYKICWGKDSDGKCTEAD 274 (782)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~D~~gHGTHVAgiaag~~~~~~~~~G~~~g~~~GVAP~A~l~~~kv~~~~~~~~~~~~~~ 274 (782)
+.. ......+.|..||||||||||+|+. | +.||||+|+|+.+|+++..+ .. +
T Consensus 74 ~~~----------~~~~~~~~d~~gHGT~vAgiia~~~-------g-----~~GvAp~a~l~~~~v~~~~~----~~--~ 125 (347)
T 2iy9_A 74 DGS----------PFPVKKSEALYIHGTAMASLIASRY-------G-----IYGVYPHALISSRRVIPDGV----QD--S 125 (347)
T ss_dssp TCC----------SSCCSSSHHHHHHHHHHHHHHHCSS-------S-----SCCSSTTCEEEEEECCSSBC----TT--H
T ss_pred CCC----------CCCCCCCCCCCCcHHHHHHHHhccc-------C-----CcccCCCCEEEEEEEecCCC----HH--H
Confidence 100 0011245678999999999999971 2 48999999999999997654 22 9
Q ss_pred HHHHHHHHhhc------CCcEEEecccCCCCCCCCccChHHHHHHhhhccCceEEEecCCCCCCC-------CCcccCCC
Q 003970 275 ILAAFDDALHD------GVDVISASFGESPPLRPFFASNADIGSFNAMQHGVTVVFSGGNDGPEP-------SLVQNVAP 341 (782)
Q Consensus 275 i~~ai~~a~~~------gvdVIn~SlG~~~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~G~~~-------~~~~~~ap 341 (782)
+++||+||+++ +++|||||||... .......+..++.++.++|++||+||||+|... ...+...+
T Consensus 126 ~~~ai~~a~~~~~~~~~~~~Vin~S~G~~~--~~~~~~~~~~ai~~a~~~gilvV~AAGN~g~~~~~~~~~~~~~Pa~~~ 203 (347)
T 2iy9_A 126 WIRAIESIMSNVFLAPGEEKIINISGGQKG--VASASVWTELLSRMGRNNDRLIVAAVGNDGADIRKLSAQQRIWPAAYH 203 (347)
T ss_dssp HHHHHHHHHTCTTSCTTEEEEEEESSCBCC--C-CCHHHHHHHHHHHHHTSCEEEEECCBSCCBTTTSCTTTSCBTTTCC
T ss_pred HHHHHHHHHhhhhcccCCceEEEeccccCC--CCCcCHHHHHHHHHHHhCCeEEEEeCCCCCCCCCCcccccccCCCcCc
Confidence 99999999999 9999999999874 223456677888889999999999999999752 33444467
Q ss_pred ----------ceEEeccccc--CcccceeEEeCCccEEEeeeeecccceeeEEEccccccCCccccCCCCCCCCCceEEE
Q 003970 342 ----------WSICVAASSI--DRTFPTEIVVNSDFSIVGESFISTEVKAKLVEAFTYFADGICKCENWMGRKATGRVVL 409 (782)
Q Consensus 342 ----------~vitVgAs~~--d~~~~~~~~~~~~~~~~g~~~~~~~~~~~lv~~~~~~~~~~c~~~~~~~~~~~gkiv~ 409 (782)
++|+|||++. +...
T Consensus 204 ~~~~~~~~~~~vi~Vga~~~~~~g~~------------------------------------------------------ 229 (347)
T 2iy9_A 204 PVSSVNKKQDPVIRVAALAQYRKGET------------------------------------------------------ 229 (347)
T ss_dssp CCSHHHHHTCCEEEEEEECCCCTTSC------------------------------------------------------
T ss_pred cccccccccCCEEEEEEcccCCCCce------------------------------------------------------
Confidence 9999999653 1100
Q ss_pred EeeCCCCccHHHHHHHHHHcCceEEEEecCCCccccccccccEEEEehhhHHHHHHHHhcCCCCcEEEEccCccccCCCC
Q 003970 410 CFSTMGSVKTEEAEAAAKKANASGLIFAEPMTELIAEVDIIPTVRIDIAQGTQLRDYLAQFPRLPIVQLKPSKTSIGKVP 489 (782)
Q Consensus 410 ~~~g~~~~~~~~k~~~~~~~Ga~g~i~~n~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~~i~~~~~~~~~~~ 489 (782)
...
T Consensus 230 -----------------------------------------------------------------------------~~~ 232 (347)
T 2iy9_A 230 -----------------------------------------------------------------------------PVL 232 (347)
T ss_dssp -----------------------------------------------------------------------------CCB
T ss_pred -----------------------------------------------------------------------------ecc
Confidence 000
Q ss_pred CCccccccCCCCCCCCCCCcccceeecCceEEeecCCCCCCCCCCCCCCccceeeeccccchhhHHHHHHHHHHHhCCCC
Q 003970 490 APTVAYFSSRGPSSISPDILKPDITAPGIGVLAAWPPNTPPTLLPSDGRSVKWNFQSGTSMSCPHVSGVVALIKSAHPNW 569 (782)
Q Consensus 490 ~~~~a~fSS~Gp~~~~~~~~KPDI~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~P~l 569 (782)
....+.||++||+ ||||+|||++|+++++.+ .|..++|||||||||||++|||+|++|+|
T Consensus 233 ~~~~~~fS~~G~~-------~~di~APG~~i~s~~~~~-------------~~~~~sGTS~AaP~VaG~aAll~~~~p~l 292 (347)
T 2iy9_A 233 HGGGITGSRFGNN-------WVDIAAPGQNITFLRPDA-------------KTGTGSGTSEATAIVSGVLAAMTSCNPRA 292 (347)
T ss_dssp CCCSSSCBCBCTT-------TCSEEEECSSEEEECTTS-------------CEEEECSHHHHHHHHHHHHHHHHHHCTTS
T ss_pred cCCCCCCCCCCCC-------CCEEEeCCCCeEeecCCC-------------CeEeccchHHHHHHHHHHHHHHHHhCCCC
Confidence 2345799999995 589999999999999865 89999999999999999999999999999
Q ss_pred CHHHHHHHHHhccccCCCCCCccccCCCCCcCCCCCccccccCccccCCC
Q 003970 570 SPAAIRSALMTTAYTRDTSHDSILAGGSMKVSDPFDIGAGHINPMKAMDP 619 (782)
Q Consensus 570 sp~~Ik~~L~~TA~~~~~~g~~~~~~~~~~~~~~~~~G~G~vn~~~Al~~ 619 (782)
++.+||++|++||++.... ....+|+|+||+.+|++.
T Consensus 293 t~~~v~~~L~~tA~~~~~~-------------~~~~~G~G~ld~~~A~~~ 329 (347)
T 2iy9_A 293 TATELKRTLLESADKYPSL-------------VDKVTEGRVLNAEKAISM 329 (347)
T ss_dssp CHHHHHHHHHHHSEECGGG-------------TTTSGGGEECCHHHHHHH
T ss_pred CHHHHHHHHHHhCccCCCC-------------CCccccCCEecHHHHHHH
Confidence 9999999999999986532 235899999999999984
No 22
>1wmd_A Protease; alpha-beta hydrolase fold, jelly-roll beta-barrel, hydrolase; 1.30A {Bacillus SP} SCOP: b.18.1.20 c.41.1.1 PDB: 1wme_A 1wmf_A
Probab=100.00 E-value=5.2e-48 Score=435.12 Aligned_cols=296 Identities=25% Similarity=0.333 Sum_probs=223.4
Q ss_pred CCCccCC-CCCCCCCcEEEEeccccCC------CCCCCCCCCCCCCCCCCccceeeccCcCCCCcccCcceeeeEecccc
Q 003970 123 TGEVTPV-QLAYGDDIVVGIFDTGVWP------ESESFQEEPSMSPIPSSWKGTCVRGEKFDPQKACNRKLIGARYYVKG 195 (782)
Q Consensus 123 ~~~~~~~-~~~~G~gV~VgVIDtGId~------~Hp~f~d~~~~~~~~~~~~g~~~~g~~f~~~~~~n~kiig~~~~~~~ 195 (782)
+++.+|. .+++|+||+|||||||||+ .||+|.+. ++..+.|.+
T Consensus 9 ~~~~~~~~~g~~G~gv~VaViDtGvd~~~~~~~~hp~l~~~-----------------------------i~~~~~~~~- 58 (434)
T 1wmd_A 9 KADVAQSSYGLYGQGQIVAVADTGLDTGRNDSSMHEAFRGK-----------------------------ITALYALGR- 58 (434)
T ss_dssp THHHHHHHHCCSCTTCEEEEEESCCTTSCSSTTSCTTTTTC-----------------------------EEEEEETTT-
T ss_pred CchhhhhccCCCCcccEEEEEecCcCCCCCCcccCcccCCC-----------------------------EeeeccccC-
Confidence 5567897 7999999999999999999 79988632 233333321
Q ss_pred cccccCCCCCCCCCCCCCCCCCCCCchhhhhhhccccccCCcccccCCcceeeecCCCeEEEEEeeeCCCCCCCCCHHHH
Q 003970 196 FEEEYGPLNASTNREYRSARDFLGHGTHTASTAAGSIAKNAGFFGLGRGIARGGAPRARLAVYKICWGKDSDGKCTEADI 275 (782)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~D~~gHGTHVAgiaag~~~~~~~~~G~~~g~~~GVAP~A~l~~~kv~~~~~~~~~~~~~~i 275 (782)
...+.|..||||||||||+|+.. .+.||||+|+|+.+|+++..+.. ....+++
T Consensus 59 ---------------~~~~~d~~gHGT~VAgiiag~g~-----------~~~GvAp~a~l~~~~v~~~~g~~-~~~~~~~ 111 (434)
T 1wmd_A 59 ---------------TNNANDTNGHGTHVAGSVLGNGS-----------TNKGMAPQANLVFQSIMDSGGGL-GGLPSNL 111 (434)
T ss_dssp ---------------TTCCCCSSSHHHHHHHHHHCCSS-----------SSCCSSTTSEEEEEECCCTTSSC-TTSCSSH
T ss_pred ---------------CCCCCCCCCcHHHHHHHHHcCCC-----------CceeeCCCCEEEEEEeecCCCcc-ccccHHH
Confidence 12466789999999999998631 25799999999999999876521 1245789
Q ss_pred HHHHHHHhhcCCcEEEecccCCCCCCCCccChHHHHHHhh-hccCceEEEecCCCCCCCCCcc--cCCCceEEecccccC
Q 003970 276 LAAFDDALHDGVDVISASFGESPPLRPFFASNADIGSFNA-MQHGVTVVFSGGNDGPEPSLVQ--NVAPWSICVAASSID 352 (782)
Q Consensus 276 ~~ai~~a~~~gvdVIn~SlG~~~~~~~~~~~~~~~a~~~a-~~~Gi~vV~AAGN~G~~~~~~~--~~ap~vitVgAs~~d 352 (782)
.++|++|+++|++|||||||... .. ..+....++.++ .++|+++|+||||+|....++. ..++++|+|||++..
T Consensus 112 ~~ai~~a~~~g~~Vin~S~G~~~--~~-~~~~~~~~id~~~~~~gvlvV~AAGN~g~~~~~~~~Pa~~~~vitVga~~~~ 188 (434)
T 1wmd_A 112 QTLFSQAYSAGARIHTNSWGAAV--NG-AYTTDSRNVDDYVRKNDMTILFAAGNEGPNGGTISAPGTAKNAITVGATENL 188 (434)
T ss_dssp HHHHHHHHHTTCSEEEECCCBCC--TT-CCCHHHHHHHHHHHHSSCEEEEECCSCTTSSSCCCBSTTCSSSEEEEEECCS
T ss_pred HHHHHHHHhcCCeEEEecCCCCc--CC-cCCHHHHHHHHHHhCCCeEEEEECCCCCCCCcccCCcccCCccEEEeccccc
Confidence 99999999999999999999874 11 123445555555 5899999999999998654444 347999999997643
Q ss_pred cccceeEEeCCccEEEeeeeecccceeeEEEccccccCCccccCCCCCCCCCceEEEEeeCCCCccHHHHHHHHHHcCce
Q 003970 353 RTFPTEIVVNSDFSIVGESFISTEVKAKLVEAFTYFADGICKCENWMGRKATGRVVLCFSTMGSVKTEEAEAAAKKANAS 432 (782)
Q Consensus 353 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~lv~~~~~~~~~~c~~~~~~~~~~~gkiv~~~~g~~~~~~~~k~~~~~~~Ga~ 432 (782)
+... +.
T Consensus 189 ~~~~--------------------------------------------------------~~------------------ 194 (434)
T 1wmd_A 189 RPSF--------------------------------------------------------GS------------------ 194 (434)
T ss_dssp CGGG--------------------------------------------------------CG------------------
T ss_pred Cccc--------------------------------------------------------Cc------------------
Confidence 2100 00
Q ss_pred EEEEecCCCccccccccccEEEEehhhHHHHHHHHhcCCCCcEEEEccCccccCCCCCCccccccCCCCCCCCCCCcccc
Q 003970 433 GLIFAEPMTELIAEVDIIPTVRIDIAQGTQLRDYLAQFPRLPIVQLKPSKTSIGKVPAPTVAYFSSRGPSSISPDILKPD 512 (782)
Q Consensus 433 g~i~~n~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSS~Gp~~~~~~~~KPD 512 (782)
.....+.++.||++||+. ++++|||
T Consensus 195 -----------------------------------------------------~~~~~~~~a~fS~~G~~~--~g~~kpd 219 (434)
T 1wmd_A 195 -----------------------------------------------------YADNINHVAQFSSRGPTK--DGRIKPD 219 (434)
T ss_dssp -----------------------------------------------------GGSCTTSBCTTSCCCCCT--TSCCCCC
T ss_pred -----------------------------------------------------ccCCCCccccccCCCCCC--CCCCCce
Confidence 001145789999999995 7999999
Q ss_pred eeecCceEEeecCCCCCCCCCCCCCCccceeeeccccchhhHHHHHHHHHHHhCCCC-----CHHHHHHHHHhccccCCC
Q 003970 513 ITAPGIGVLAAWPPNTPPTLLPSDGRSVKWNFQSGTSMSCPHVSGVVALIKSAHPNW-----SPAAIRSALMTTAYTRDT 587 (782)
Q Consensus 513 I~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~P~l-----sp~~Ik~~L~~TA~~~~~ 587 (782)
|+|||++|+++++........ .......|..++|||||||||||++|||+|++|++ ++++||++|++||+++..
T Consensus 220 i~ApG~~i~s~~~~~~~~~~~-~~~~~~~~~~~sGTS~AaP~vaG~aAll~~~~~~~~~~~~s~~~vk~~L~~tA~~~~~ 298 (434)
T 1wmd_A 220 VMAPGTFILSARSSLAPDSSF-WANHDSKYAYMGGTSMATPIVAGNVAQLREHFVKNRGITPKPSLLKAALIAGAADIGL 298 (434)
T ss_dssp EEEECSSEEEECCTTCCGGGS-SEEEETTEEEECSHHHHHHHHHHHHHHHHHHHHHHSSSCCCHHHHHHHHHHHCBCCSS
T ss_pred EEcCCCCeEecCCCCCCCccc-ccCCCCceEeecchhHHHHHHHHHHHHHHHHHHhccCCCCCHHHHHHHHHcCCcccCC
Confidence 999999999998753210000 00012479999999999999999999999999876 899999999999986431
Q ss_pred CCCccccCCCCCcCCCCCccccccCccccCCCc
Q 003970 588 SHDSILAGGSMKVSDPFDIGAGHINPMKAMDPG 620 (782)
Q Consensus 588 ~g~~~~~~~~~~~~~~~~~G~G~vn~~~Al~~g 620 (782)
..++..+|||++|+.+|++..
T Consensus 299 ------------~~~~~~~G~G~vd~~~a~~~~ 319 (434)
T 1wmd_A 299 ------------GYPNGNQGWGRVTLDKSLNVA 319 (434)
T ss_dssp ------------CSSCTTTTTCBCCHHHHHTCE
T ss_pred ------------CCCCccCCcCeEeHHHhcccc
Confidence 235678999999999999754
No 23
>3lpc_A APRB2; protease, subtilase, virulence factor, hydrolase; 1.70A {Dichelobacter nodosus} PDB: 3lpa_A 3lpd_A 3ti9_A 3ti7_A
Probab=100.00 E-value=5.5e-48 Score=421.66 Aligned_cols=303 Identities=23% Similarity=0.258 Sum_probs=221.1
Q ss_pred CCCccCCCCCCCCCcEEEEeccccCCCCCCCCCCCCCCCCCCCccceeeccCcCCCCcccCcceeeeEecccccccccCC
Q 003970 123 TGEVTPVQLAYGDDIVVGIFDTGVWPESESFQEEPSMSPIPSSWKGTCVRGEKFDPQKACNRKLIGARYYVKGFEEEYGP 202 (782)
Q Consensus 123 ~~~~~~~~~~~G~gV~VgVIDtGId~~Hp~f~d~~~~~~~~~~~~g~~~~g~~f~~~~~~n~kiig~~~~~~~~~~~~~~ 202 (782)
++..+|+.+++|+||+||||||||+ +||+|.+.. ...|+-.......++.........-...++.. .... +
T Consensus 20 ~~~~aw~~g~~G~gV~VaViDtGi~-~hp~l~~~~-----~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~-~~~~-~- 90 (340)
T 3lpc_A 20 KADKVWDMGFTGQNVVVAVVDTGIL-HHRDLNANV-----LPGYDFISNSQISLDGDGRDADPFDEGDWFDN-WACG-G- 90 (340)
T ss_dssp CHHHHHHHTCSCTTCEEEEEESCBC-CCTTTGGGB-----CCCEECCCCHHHHCSSSSSBSCCBCCCCCBCT-TTTS-C-
T ss_pred CHHHHHHhcCCCCCeEEEEEcCCCC-CChhhhccc-----ccCccccCCccccccCCCccCCcccccccccc-cccc-C-
Confidence 6778999999999999999999998 999997542 01111000000000000000000000000000 0000 0
Q ss_pred CCCCCCCCCCCCCCCCCCchhhhhhhccccccCCcccccCCcceeeecCCCeEEEEEeeeCCCCCCCCCHHHHHHHHHHH
Q 003970 203 LNASTNREYRSARDFLGHGTHTASTAAGSIAKNAGFFGLGRGIARGGAPRARLAVYKICWGKDSDGKCTEADILAAFDDA 282 (782)
Q Consensus 203 ~~~~~~~~~~~~~D~~gHGTHVAgiaag~~~~~~~~~G~~~g~~~GVAP~A~l~~~kv~~~~~~~~~~~~~~i~~ai~~a 282 (782)
...+.....|..||||||||||+|...++. .+.||||+|+|+.+|++...+ +..++++++|+||
T Consensus 91 ----~~~~~~~~~d~~gHGT~vAgiia~~~~~~~--------g~~GvAp~a~l~~~~v~~~~~----~~~~~~~~ai~~a 154 (340)
T 3lpc_A 91 ----RPDPRKERSDSSWHGSHVAGTIAAVTNNRI--------GVAGVAYGAKVVPVRALGRCG----GYDSDISDGLYWA 154 (340)
T ss_dssp ----TTCGGGSCBCCCCHHHHHHHHHHCCCSSSS--------SCCCTTTTSEEEEEECCBTTB----CCHHHHHHHHHHH
T ss_pred ----CCCcccCCCCCCCCHHHHHHHHHccCCCCC--------cceeecCCCEEEEEEEecCCC----CcHHHHHHHHHHH
Confidence 011223457889999999999999865433 258999999999999998765 7889999999999
Q ss_pred hh----------cCCcEEEecccCCCCCCCCccChHHHHHHhhhccCceEEEecCCCCCCCC-CcccCCCceEEeccccc
Q 003970 283 LH----------DGVDVISASFGESPPLRPFFASNADIGSFNAMQHGVTVVFSGGNDGPEPS-LVQNVAPWSICVAASSI 351 (782)
Q Consensus 283 ~~----------~gvdVIn~SlG~~~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~G~~~~-~~~~~ap~vitVgAs~~ 351 (782)
++ .+++|||||||... .....+..++.++.++|++||+||||+|.... ..+...+++|+|||++.
T Consensus 155 ~~~~~~~~~~~~~~~~Vin~S~G~~~----~~~~~~~~~~~~a~~~gi~vV~AAGN~g~~~~~~~Pa~~~~vi~Vga~~~ 230 (340)
T 3lpc_A 155 AGGRIAGIPENRNPAKVINMSLGSDG----QCSYNAQTMIDRATRLGALVVVAAGNENQNASNTWPTSCNNVLSVGATTS 230 (340)
T ss_dssp HTCCCTTSCCCSSCCSEEEECCCEES----CCCHHHHHHHHHHHHHTCEEEEECCSSSSBGGGEETTTSSSCEEEEEECT
T ss_pred hcccccccccccCCCeEEEeCcCCCC----CcchhHHHHHHHHHhCCcEEEEeCCCCCCCCCCcCCccCCceEEEecCCC
Confidence 98 89999999999863 12345677788889999999999999987543 34455789999998542
Q ss_pred CcccceeEEeCCccEEEeeeeecccceeeEEEccccccCCccccCCCCCCCCCceEEEEeeCCCCccHHHHHHHHHHcCc
Q 003970 352 DRTFPTEIVVNSDFSIVGESFISTEVKAKLVEAFTYFADGICKCENWMGRKATGRVVLCFSTMGSVKTEEAEAAAKKANA 431 (782)
Q Consensus 352 d~~~~~~~~~~~~~~~~g~~~~~~~~~~~lv~~~~~~~~~~c~~~~~~~~~~~gkiv~~~~g~~~~~~~~k~~~~~~~Ga 431 (782)
T Consensus 231 -------------------------------------------------------------------------------- 230 (340)
T 3lpc_A 231 -------------------------------------------------------------------------------- 230 (340)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred eEEEEecCCCccccccccccEEEEehhhHHHHHHHHhcCCCCcEEEEccCccccCCCCCCccccccCCCCCCCCCCCccc
Q 003970 432 SGLIFAEPMTELIAEVDIIPTVRIDIAQGTQLRDYLAQFPRLPIVQLKPSKTSIGKVPAPTVAYFSSRGPSSISPDILKP 511 (782)
Q Consensus 432 ~g~i~~n~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSS~Gp~~~~~~~~KP 511 (782)
.+.++.||++||. |
T Consensus 231 ----------------------------------------------------------~~~~~~~S~~g~~--------~ 244 (340)
T 3lpc_A 231 ----------------------------------------------------------RGIRASFSNYGVD--------V 244 (340)
T ss_dssp ----------------------------------------------------------TSSBCTTCCBSTT--------C
T ss_pred ----------------------------------------------------------CCCcCCCCCCCCC--------c
Confidence 3457899999984 7
Q ss_pred ceeecCceEEeecCCCCCCCCCCCCCCccceeeeccccchhhHHHHHHHHHHHh-C---CCCCHHHHHHHHHhccccCCC
Q 003970 512 DITAPGIGVLAAWPPNTPPTLLPSDGRSVKWNFQSGTSMSCPHVSGVVALIKSA-H---PNWSPAAIRSALMTTAYTRDT 587 (782)
Q Consensus 512 DI~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~-~---P~lsp~~Ik~~L~~TA~~~~~ 587 (782)
||+|||++|+++++.+... .....|..++|||||||||||++|||+|+ + |.|++++||++|++||+++..
T Consensus 245 di~ApG~~i~s~~~~~~~~------~~~~~~~~~sGTS~AaP~vaG~aAll~~~~~~~~p~lt~~~v~~~L~~tA~~~~~ 318 (340)
T 3lpc_A 245 DLAAPGQDILSTVDSGTRR------PVSDAYSFMAGTSMATPHVSGVAALVISAANSVNKNLTPAELKDVLVSTTSPFNG 318 (340)
T ss_dssp CEEEECSSEEEEEESCSSS------CCSEEEEEECSHHHHHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHTCBCCSS
T ss_pred eEEecCCCeecccCCCCcC------CCCCcceecccHhHHHHHHHHHHHHHHHhhhhhCCCCCHHHHHHHHHhcCCcCCC
Confidence 9999999999998865321 11236999999999999999999999998 5 999999999999999997642
Q ss_pred CCCccccCCCCCcCCCCCccccccCccccCCC
Q 003970 588 SHDSILAGGSMKVSDPFDIGAGHINPMKAMDP 619 (782)
Q Consensus 588 ~g~~~~~~~~~~~~~~~~~G~G~vn~~~Al~~ 619 (782)
.++..+|||+||+.+|++.
T Consensus 319 -------------~~~~~~G~G~vd~~~Av~~ 337 (340)
T 3lpc_A 319 -------------RLDRALGSGIVDAEAAVNS 337 (340)
T ss_dssp -------------CCSSCCCSSBCCHHHHHHH
T ss_pred -------------CCCCCcccceecHHHHHHH
Confidence 1455899999999999874
No 24
>1sh7_A Extracellular subtilisin-like serine proteinase; cold adaptation, psychrotrophic, subtilisin-like proteinase, depentent, hydrolase; HET: PMS; 1.84A {Vibrio SP} PDB: 1s2n_A*
Probab=100.00 E-value=2.3e-46 Score=396.96 Aligned_cols=238 Identities=25% Similarity=0.349 Sum_probs=200.5
Q ss_pred CCCccCCCCCCCCCcEEEEeccccCCCCCCCCCCCCCCCCCCCccceeeccCcCCCCcccCcceeeeEecccccccccCC
Q 003970 123 TGEVTPVQLAYGDDIVVGIFDTGVWPESESFQEEPSMSPIPSSWKGTCVRGEKFDPQKACNRKLIGARYYVKGFEEEYGP 202 (782)
Q Consensus 123 ~~~~~~~~~~~G~gV~VgVIDtGId~~Hp~f~d~~~~~~~~~~~~g~~~~g~~f~~~~~~n~kiig~~~~~~~~~~~~~~ 202 (782)
+...+|..+++|+||+|+|||||||++||+|.+. ++..+.|.+.
T Consensus 17 ~~~~aw~~~~~G~gv~VaViDtGvd~~h~~l~~~-----------------------------~~~~~~~~~~------- 60 (284)
T 1sh7_A 17 PLDRNYNANFDGFGVTAYVIDTGVNNNHEEFGGR-----------------------------SVSGYDFVDN------- 60 (284)
T ss_dssp SCCSBCCCSCCCTTCEEEEEESCCCTTCTTTTTC-----------------------------EEEEEETTTT-------
T ss_pred CchhhhhcCCCCCCCEEEEEcCCCCCCChhHcCC-----------------------------ccccccccCC-------
Confidence 3567899999999999999999999999999632 2222333221
Q ss_pred CCCCCCCCCCCCCCCCCCchhhhhhhccccccCCcccccCCcceeeecCCCeEEEEEeeeCCCCCCCCCHHHHHHHHHHH
Q 003970 203 LNASTNREYRSARDFLGHGTHTASTAAGSIAKNAGFFGLGRGIARGGAPRARLAVYKICWGKDSDGKCTEADILAAFDDA 282 (782)
Q Consensus 203 ~~~~~~~~~~~~~D~~gHGTHVAgiaag~~~~~~~~~G~~~g~~~GVAP~A~l~~~kv~~~~~~~~~~~~~~i~~ai~~a 282 (782)
..++.|..||||||||||+|+. .||||+|+|+.+|+++..+ .+..+++++||+|+
T Consensus 61 --------~~~~~d~~gHGT~vAgiia~~~--------------~GvAp~a~l~~~kv~~~~g---~~~~~~~~~ai~~a 115 (284)
T 1sh7_A 61 --------DADSSDCNGHGTHVAGTIGGSQ--------------YGVAKNVNIVGVRVLSCSG---SGTTSGVISGVDWV 115 (284)
T ss_dssp --------BSCCCCSSSHHHHHHHHHHCTT--------------TCSSTTCEEEEEECBCTTS---CBCHHHHHHHHHHH
T ss_pred --------CCCCCCCCCcHHHHHHHHhccc--------------CCcCCCCEEEEEEeeCCCC---CcCHHHHHHHHHHH
Confidence 1245688999999999999863 6999999999999998776 57889999999999
Q ss_pred hhc--CCcEEEecccCCCCCCCCccChHHHHHHhhhccCceEEEecCCCCCCCC-CcccCCCceEEecccccCcccceeE
Q 003970 283 LHD--GVDVISASFGESPPLRPFFASNADIGSFNAMQHGVTVVFSGGNDGPEPS-LVQNVAPWSICVAASSIDRTFPTEI 359 (782)
Q Consensus 283 ~~~--gvdVIn~SlG~~~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~G~~~~-~~~~~ap~vitVgAs~~d~~~~~~~ 359 (782)
+++ +++|||||||... ...+..++.++.++|++||+||||+|.... ..+...+++|+|||++.
T Consensus 116 ~~~~~~~~Vin~S~G~~~------~~~~~~ai~~a~~~gi~vV~AAGN~g~~~~~~~Pa~~~~vi~Vga~~~-------- 181 (284)
T 1sh7_A 116 AQNASGPSVANMSLGGGQ------STALDSAVQGAIQSGVSFMLAAGNSNADACNTSPARVPSGVTVGSTTS-------- 181 (284)
T ss_dssp HHHCCSSEEEEECCCBSC------CHHHHHHHHHHHHTTCEEEEECCSSSSBGGGSBTTTCTTSEEEEEECT--------
T ss_pred HhCCCCCcEEEeCCCCCC------CHHHHHHHHHHHHCCCEEEEECCcCCCCCCccccccCCCeEEEEEecC--------
Confidence 984 7999999999873 356777888899999999999999996542 33455799999998541
Q ss_pred EeCCccEEEeeeeecccceeeEEEccccccCCccccCCCCCCCCCceEEEEeeCCCCccHHHHHHHHHHcCceEEEEecC
Q 003970 360 VVNSDFSIVGESFISTEVKAKLVEAFTYFADGICKCENWMGRKATGRVVLCFSTMGSVKTEEAEAAAKKANASGLIFAEP 439 (782)
Q Consensus 360 ~~~~~~~~~g~~~~~~~~~~~lv~~~~~~~~~~c~~~~~~~~~~~gkiv~~~~g~~~~~~~~k~~~~~~~Ga~g~i~~n~ 439 (782)
T Consensus 182 -------------------------------------------------------------------------------- 181 (284)
T 1sh7_A 182 -------------------------------------------------------------------------------- 181 (284)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCccccccccccEEEEehhhHHHHHHHHhcCCCCcEEEEccCccccCCCCCCccccccCCCCCCCCCCCcccceeecCce
Q 003970 440 MTELIAEVDIIPTVRIDIAQGTQLRDYLAQFPRLPIVQLKPSKTSIGKVPAPTVAYFSSRGPSSISPDILKPDITAPGIG 519 (782)
Q Consensus 440 ~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSS~Gp~~~~~~~~KPDI~APG~~ 519 (782)
.+.++.||++||. |||+|||++
T Consensus 182 --------------------------------------------------~~~~~~~S~~G~~--------~di~ApG~~ 203 (284)
T 1sh7_A 182 --------------------------------------------------SDSRSSFSNWGSC--------VDLFAPGSQ 203 (284)
T ss_dssp --------------------------------------------------TSBBCTTCCBSTT--------CCEEEECSS
T ss_pred --------------------------------------------------CCCcCcccCCCCc--------cEEEeccCC
Confidence 3456899999997 699999999
Q ss_pred EEeecCCCCCCCCCCCCCCccceeeeccccchhhHHHHHHHHHHHhCCCCCHHHHHHHHHhccccCC
Q 003970 520 VLAAWPPNTPPTLLPSDGRSVKWNFQSGTSMSCPHVSGVVALIKSAHPNWSPAAIRSALMTTAYTRD 586 (782)
Q Consensus 520 I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~P~lsp~~Ik~~L~~TA~~~~ 586 (782)
|+++++.+ .|..++|||||||||||++|||+|++|+|+++|||++|++||++..
T Consensus 204 i~s~~~~~-------------~~~~~sGTS~AaP~vaG~aAll~~~~p~lt~~~v~~~L~~tA~~~~ 257 (284)
T 1sh7_A 204 IKSAWYDG-------------GYKTISGTSMATPHVAGVAALYLQENNGLTPLQLTGLLNSRASENK 257 (284)
T ss_dssp EEEECTTS-------------SEEEECSHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHHSEESC
T ss_pred eEEecCCC-------------CEEEccChHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHhhCccCC
Confidence 99998865 7999999999999999999999999999999999999999998753
No 25
>3lxu_X Tripeptidyl-peptidase 2; spindle complex, aminopeptidase, hydrolase, phosphoprotein, protease; 3.14A {Drosophila melanogaster}
Probab=100.00 E-value=2.6e-46 Score=450.75 Aligned_cols=361 Identities=23% Similarity=0.231 Sum_probs=247.4
Q ss_pred CCCCCCchhhhhhhccccccCCcccccCCcceeeecCCCeEEEEEeeeCCCCCCCCCHHHHHHHHHHHhh-----cCCcE
Q 003970 215 RDFLGHGTHTASTAAGSIAKNAGFFGLGRGIARGGAPRARLAVYKICWGKDSDGKCTEADILAAFDDALH-----DGVDV 289 (782)
Q Consensus 215 ~D~~gHGTHVAgiaag~~~~~~~~~G~~~g~~~GVAP~A~l~~~kv~~~~~~~~~~~~~~i~~ai~~a~~-----~gvdV 289 (782)
.|++||||||||||||.. ++ ..+.||||+|+|+.+|+++..... .+....++.+|.+|++ .|++|
T Consensus 267 ~D~~GHGThVAGIIAa~~-N~--------~g~~GVAP~AkI~~vKVld~~~g~-~~t~s~l~~AI~~Aid~a~~~~gadV 336 (1354)
T 3lxu_X 267 GMSSPHGTHVSSIASGNH-SS--------RDVDGVAPNAKIVSMTIGDGRLGS-METGTALVRAMTKVMELCRDGRRIDV 336 (1354)
T ss_dssp ECCCHHHHHHHHHHCCCC-SS--------SSSCCSCTTCEEEEEECBCTTTSS-CBCHHHHHHHHHHHHHHHHTTCCCCE
T ss_pred CCCCCcHHHHHHHHhcCC-CC--------CCceeecCCCEEEEEEeccCCCCc-ccChHHHHHHHHHHHHHHhhcCCceE
Confidence 478999999999999985 22 235899999999999998765421 2366788888888887 79999
Q ss_pred EEecccCCCCCCCCccChHHHHHHhhh-ccCceEEEecCCCCCCCCCcccC----CCceEEecccccCcccceeEEeCCc
Q 003970 290 ISASFGESPPLRPFFASNADIGSFNAM-QHGVTVVFSGGNDGPEPSLVQNV----APWSICVAASSIDRTFPTEIVVNSD 364 (782)
Q Consensus 290 In~SlG~~~~~~~~~~~~~~~a~~~a~-~~Gi~vV~AAGN~G~~~~~~~~~----ap~vitVgAs~~d~~~~~~~~~~~~ 364 (782)
||||||... .....+.+..++.++. ++|++||+||||+|+...++..+ ++++|+|||++.+.........
T Consensus 337 INmS~G~~~--~~~~~~~l~~aI~~A~~~~GVlVVaAAGN~G~~~~ti~~PA~~ss~~VItVGAtd~~~~~~a~ys~--- 411 (1354)
T 3lxu_X 337 INMSYGEHA--NWSNSGRIGELMNEVVNKYGVVWVASAGNHGPALCTVGTPPDISQPSLIGVGAYVSPQMMEAEYAM--- 411 (1354)
T ss_dssp EEECCCCCC--SCSSCCHHHHHHHHHHHTSCCEEEEECCSCCSSSSCCCTTTCSSSSCEEEEEEECCTTCCCC-------
T ss_pred EEcCCccCC--CCCccHHHHHHHHHHHHhCCcEEEEeCCCCCCCCCccCCcccccCCceEEEEeecCCCCccccccc---
Confidence 999999984 2233456777777775 89999999999999865554332 6999999997643211000000
Q ss_pred cEEEeeeeecccceeeEEEccccccCCccccCCCCCCCCCceEEEEeeCCCCccHHHHHHHHHHcCceEEEEecCCCccc
Q 003970 365 FSIVGESFISTEVKAKLVEAFTYFADGICKCENWMGRKATGRVVLCFSTMGSVKTEEAEAAAKKANASGLIFAEPMTELI 444 (782)
Q Consensus 365 ~~~~g~~~~~~~~~~~lv~~~~~~~~~~c~~~~~~~~~~~gkiv~~~~g~~~~~~~~k~~~~~~~Ga~g~i~~n~~~~~~ 444 (782)
T Consensus 412 -------------------------------------------------------------------------------- 411 (1354)
T 3lxu_X 412 -------------------------------------------------------------------------------- 411 (1354)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cccccccEEEEehhhHHHHHHHHhcCCCCcEEEEccCccccCCCCCCccccccCCCCCCCCCCCcccceeecCceEEeec
Q 003970 445 AEVDIIPTVRIDIAQGTQLRDYLAQFPRLPIVQLKPSKTSIGKVPAPTVAYFSSRGPSSISPDILKPDITAPGIGVLAAW 524 (782)
Q Consensus 445 ~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSS~Gp~~~~~~~~KPDI~APG~~I~sa~ 524 (782)
.....+.+++|||+||+. ++++||||+|||++|+++.
T Consensus 412 -----------------------------------------~~~~~g~~asFSS~GPt~--dg~~KpDIaAPG~~I~St~ 448 (1354)
T 3lxu_X 412 -----------------------------------------REKLPGNVYTWTSRDPCI--DGGQGVTVCAPGGAIASVP 448 (1354)
T ss_dssp -----------------------------------------------CCCCCCCCSCCS--SSSCCEEEEEEC-------
T ss_pred -----------------------------------------ccCCCCccccccCCCCCc--cCCCcceEEecCceEEEee
Confidence 001135789999999995 7999999999999999976
Q ss_pred CCCCCCCCCCCCCCccceeeeccccchhhHHHHHHHHHHH----hCCCCCHHHHHHHHHhccccCCCCCCccccCCCCCc
Q 003970 525 PPNTPPTLLPSDGRSVKWNFQSGTSMSCPHVSGVVALIKS----AHPNWSPAAIRSALMTTAYTRDTSHDSILAGGSMKV 600 (782)
Q Consensus 525 ~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q----~~P~lsp~~Ik~~L~~TA~~~~~~g~~~~~~~~~~~ 600 (782)
.... ..|..++|||||||||||++|||++ .+|.|++.+||++|++||++.+.
T Consensus 449 ~~~~-----------~~y~~~SGTSmAAP~VAGvAALLLSalkq~~P~LTp~qVk~lL~~TA~~~~~------------- 504 (1354)
T 3lxu_X 449 QFTM-----------SKSQLMNGTSMAAPHVAGAVALLISGLKQQNIEYSPYSIKRAISVTATKLGY------------- 504 (1354)
T ss_dssp -------------------CCCCGGGCHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHTTSBCCTT-------------
T ss_pred cCCC-----------CceecCCCCCHHHHHHHHHHHHHHHhhHhhCCCCCHHHHHHHHHHhCccCCC-------------
Confidence 5421 2789999999999999999999987 79999999999999999997643
Q ss_pred CCCCCccccccCccccCCCceeecCCchhhHhhhhccCCCccceeeecCCCCCCCCCccCCCCCCCCCCCCCcCeEEEee
Q 003970 601 SDPFDIGAGHINPMKAMDPGLIYDLKPTDYIVFLRNIGYTQDQINKIFLPSPDETERTSCPQAHKIPNSFINYPSITVSN 680 (782)
Q Consensus 601 ~~~~~~G~G~vn~~~Al~~glv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~ln~ps~~~~~ 680 (782)
.+++.||||+||+.+|++..+.|+..+.+++.|.|.++..... .+... .. .|
T Consensus 505 ~~~~~~G~GlLDa~~AV~~a~~~~~~p~~~v~f~~~v~~~~~r-gIylR------~~-~~-------------------- 556 (1354)
T 3lxu_X 505 VDPFAQGHGLLNVEKAFEHLTEHRQSKDNMLRFSVRVGNNADK-GIHLR------QG-VQ-------------------- 556 (1354)
T ss_dssp SCTTTSSSSBCCHHHHHHHHHTTTTCGGGGEEEEEEETTTTBS-SEEEC------SS-CC--------------------
T ss_pred CCcccccCCEeCHHHHHHHHHhcCCCCccceEEEEEecCCCCC-ceEEe------cc-cc--------------------
Confidence 2456899999999999999999999999999999998853321 11111 00 00
Q ss_pred cCceEEEEEEEE----ec---CCCCCeE--EEEEEeCCCccEEEEEcceeEeccCCeEEEEEEEEEecccCCCceEEEEE
Q 003970 681 LQSTMTIKRTVK----NV---GQKKNAI--YFASVVKPGGVEVVVWPRVLVFSWFKEEVSYYVSLKPLKMSQGRFDFGQI 751 (782)
Q Consensus 681 ~~~~~~~~rtvt----nv---~~~~~~t--y~~~~~~p~g~~v~v~p~~~~~~~~g~~~~~~v~~~~~~~~~~~~~~G~~ 751 (782)
....+++.+|+ |. ....... -++.+....- -|. -|..|.+ .++.++|.|.+++... ..+..+++|
T Consensus 557 -~~~~~~tv~V~p~f~~~~~~~~~~~i~f~~~l~L~~t~~-wv~-~p~~l~l--~~~~r~~~v~vDp~~L-~~G~h~~~v 630 (1354)
T 3lxu_X 557 -RNSIDYNVYIEPIFYNDKEADPKDKFNFNVRLNLIASQP-WVQ-CGAFLDL--SYGTRSIAVRVDPTGL-QPGVHSAVI 630 (1354)
T ss_dssp -CSCEEEEEEEEEEESSCSCSSSTTCSCCCCEEEEEESST-TEE-ECSCEEC--TTSCEEEEEEECGGGC-CSEEEEEEE
T ss_pred -CCceEEEEEEeeeecCcccCChhhccceEEEEEEecCCC-cee-cccceee--cCCCceEEEEECCCCC-CCcceeEEE
Confidence 11223333321 11 1110111 2223322111 233 3777766 4677889999998644 456789999
Q ss_pred EEEc-----CceEEEeEEEEEEcCC
Q 003970 752 VWSD-----GFHYVRSPLVVFVNNT 771 (782)
Q Consensus 752 ~~~~-----~~~~v~~P~~~~~~~~ 771 (782)
..-| ..+..|+|+-|.....
T Consensus 631 ~~~D~~~~~~gp~f~ipvTv~~P~~ 655 (1354)
T 3lxu_X 631 RAYDTDCVQKGSLFEIPVTVVQPHV 655 (1354)
T ss_dssp EEEESSCTTSCCSEEEEEEEEECBC
T ss_pred EEEEcCCcccCceEEeeEEEEeeee
Confidence 8765 2588999999887653
No 26
>2pwa_A Proteinase K; structure, alanine boronic acid, hydrolase; 0.83A {Engyodontium album} SCOP: c.41.1.1 PDB: 1p7v_A 1p7w_A 2dqk_A 2duj_A 2g4v_A 2hd4_A 2hpz_A 2id8_A 2pq2_A 1ic6_A 2pwb_A* 2pyz_A* 2v8b_A 3aj8_A 3aj9_A 3dyb_A* 3gt3_A* 3gt4_A* 3l1k_A 3osz_A ...
Probab=100.00 E-value=2.1e-46 Score=396.21 Aligned_cols=240 Identities=27% Similarity=0.309 Sum_probs=200.5
Q ss_pred cCCCCCCCCCcEEEEeccccCCCCCCCCCCCCCCCCCCCccceeeccCcCCCCcccCcceeeeEecccccccccCCCCCC
Q 003970 127 TPVQLAYGDDIVVGIFDTGVWPESESFQEEPSMSPIPSSWKGTCVRGEKFDPQKACNRKLIGARYYVKGFEEEYGPLNAS 206 (782)
Q Consensus 127 ~~~~~~~G~gV~VgVIDtGId~~Hp~f~d~~~~~~~~~~~~g~~~~g~~f~~~~~~n~kiig~~~~~~~~~~~~~~~~~~ 206 (782)
.|.. .+|+||+|+|||||||++||+|.+. +...+.|.
T Consensus 24 ~~~~-~~G~gv~VaViDsGvd~~H~~l~~~-----------------------------~~~~~~~~------------- 60 (279)
T 2pwa_A 24 YYDE-SAGQGSCVYVIDTGIEASHPEFEGR-----------------------------AQMVKTYY------------- 60 (279)
T ss_dssp ECCT-TTTTTEEEEEEESCCCTTCGGGTTC-----------------------------EEEEEESS-------------
T ss_pred cccC-CCCCCCEEEEEeCCCCCCChhHhCc-----------------------------cccccCCC-------------
Confidence 5543 7899999999999999999999642 22222222
Q ss_pred CCCCCCCCCCCCCCchhhhhhhccccccCCcccccCCcceeeecCCCeEEEEEeeeCCCCCCCCCHHHHHHHHHHHhhcC
Q 003970 207 TNREYRSARDFLGHGTHTASTAAGSIAKNAGFFGLGRGIARGGAPRARLAVYKICWGKDSDGKCTEADILAAFDDALHDG 286 (782)
Q Consensus 207 ~~~~~~~~~D~~gHGTHVAgiaag~~~~~~~~~G~~~g~~~GVAP~A~l~~~kv~~~~~~~~~~~~~~i~~ai~~a~~~g 286 (782)
.++.|..||||||||||+|+. .||||+|+|+.+|+++..+ .+..+++++||+|+++++
T Consensus 61 -----~~~~d~~gHGT~vAgiia~~~--------------~GvAp~a~i~~~~v~~~~g---~~~~~~~~~ai~~a~~~~ 118 (279)
T 2pwa_A 61 -----YSSRDGNGHGTHCAGTVGSRT--------------YGVAKKTQLFGVKVLDDNG---SGQYSTIIAGMDFVASDK 118 (279)
T ss_dssp -----SCSSCSSSHHHHHHHHHHCTT--------------TCSSTTCEEEEEECSCTTS---CCCHHHHHHHHHHHHHHG
T ss_pred -----CCCCCCCCCHHHHHHHHHhcc--------------cccCCCCEEEEEEeEcCCC---CcCHHHHHHHHHHHHhcC
Confidence 135678999999999999862 6999999999999998776 578899999999999998
Q ss_pred C-------cEEEecccCCCCCCCCccChHHHHHHhhhccCceEEEecCCCCCCCC-CcccCCCceEEecccccCccccee
Q 003970 287 V-------DVISASFGESPPLRPFFASNADIGSFNAMQHGVTVVFSGGNDGPEPS-LVQNVAPWSICVAASSIDRTFPTE 358 (782)
Q Consensus 287 v-------dVIn~SlG~~~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~G~~~~-~~~~~ap~vitVgAs~~d~~~~~~ 358 (782)
+ +|||||||... ...+..++.++.++|++||+||||+|.... ..+...+++|+|||++.
T Consensus 119 ~~~~~~~~~Vin~S~G~~~------~~~~~~ai~~a~~~gi~vV~AAGN~g~~~~~~~Pa~~~~vi~Vga~~~------- 185 (279)
T 2pwa_A 119 NNRNCPKGVVASLSLGGGY------SSSVNSAAARLQSSGVMVAVAAGNNNADARNYSPASEPSVCTVGASDR------- 185 (279)
T ss_dssp GGSCCTTEEEEEECCCEEC------CHHHHHHHHHHHHTTEEEEEECCSSSSBGGGEETTTCTTSEEEEEECT-------
T ss_pred ccccCCCccEEEecCCCCC------CHHHHHHHHHHHHCCCEEEEECCCCCCcCCCcCcccCCcEEEEEEecC-------
Confidence 8 99999999762 356777888899999999999999997543 23455799999998542
Q ss_pred EEeCCccEEEeeeeecccceeeEEEccccccCCccccCCCCCCCCCceEEEEeeCCCCccHHHHHHHHHHcCceEEEEec
Q 003970 359 IVVNSDFSIVGESFISTEVKAKLVEAFTYFADGICKCENWMGRKATGRVVLCFSTMGSVKTEEAEAAAKKANASGLIFAE 438 (782)
Q Consensus 359 ~~~~~~~~~~g~~~~~~~~~~~lv~~~~~~~~~~c~~~~~~~~~~~gkiv~~~~g~~~~~~~~k~~~~~~~Ga~g~i~~n 438 (782)
T Consensus 186 -------------------------------------------------------------------------------- 185 (279)
T 2pwa_A 186 -------------------------------------------------------------------------------- 185 (279)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCccccccccccEEEEehhhHHHHHHHHhcCCCCcEEEEccCccccCCCCCCccccccCCCCCCCCCCCcccceeecCc
Q 003970 439 PMTELIAEVDIIPTVRIDIAQGTQLRDYLAQFPRLPIVQLKPSKTSIGKVPAPTVAYFSSRGPSSISPDILKPDITAPGI 518 (782)
Q Consensus 439 ~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSS~Gp~~~~~~~~KPDI~APG~ 518 (782)
.+.++.||++||. |||+|||+
T Consensus 186 ---------------------------------------------------~~~~~~~S~~G~~--------~di~APG~ 206 (279)
T 2pwa_A 186 ---------------------------------------------------YDRRSSFSNYGSV--------LDIFGPGT 206 (279)
T ss_dssp ---------------------------------------------------TSBBCTTCCBSTT--------CCEEEECS
T ss_pred ---------------------------------------------------CCCcCCcCCCCCc--------ceEEEecC
Confidence 3457899999996 69999999
Q ss_pred eEEeecCCCCCCCCCCCCCCccceeeeccccchhhHHHHHHHHHHHhCCCCCHHHHHHHHHhccccCCCCCCccccCCCC
Q 003970 519 GVLAAWPPNTPPTLLPSDGRSVKWNFQSGTSMSCPHVSGVVALIKSAHPNWSPAAIRSALMTTAYTRDTSHDSILAGGSM 598 (782)
Q Consensus 519 ~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~P~lsp~~Ik~~L~~TA~~~~~~g~~~~~~~~~ 598 (782)
+|+++++.+ .|..++|||||||||||++|||+|+ |++++.+||++|++||++...
T Consensus 207 ~i~s~~~~~-------------~~~~~sGTS~AaP~VaG~aAll~~~-p~lt~~~v~~~L~~tA~~~~~----------- 261 (279)
T 2pwa_A 207 DILSTWIGG-------------STRSISGTSMATPHVAGLAAYLMTL-GKTTAASACRYIADTANKGDL----------- 261 (279)
T ss_dssp SEEEEETTT-------------EEEEECSHHHHHHHHHHHHHHHHHT-TSCCTTTHHHHHHHHSEESCC-----------
T ss_pred CeEEeecCC-------------CEEEcCChHHHHHHHHHHHHHHHhC-CCCCHHHHHHHHHHhCccccc-----------
Confidence 999999875 7999999999999999999999999 999999999999999987421
Q ss_pred CcCCCCCccccccCc
Q 003970 599 KVSDPFDIGAGHINP 613 (782)
Q Consensus 599 ~~~~~~~~G~G~vn~ 613 (782)
..+|+|..|+
T Consensus 262 -----~~~~~g~~n~ 271 (279)
T 2pwa_A 262 -----SNIPFGTVNL 271 (279)
T ss_dssp -----BSCCTTSCCE
T ss_pred -----CCCCCCCccE
Confidence 2467787776
No 27
>2b6n_A Proteinase K; S binding, substrate specificity, proteinase K, subtilase, psychrotrophic, psychrophilic, hydrolase; 1.80A {Serratia SP}
Probab=100.00 E-value=6.8e-46 Score=392.81 Aligned_cols=239 Identities=27% Similarity=0.348 Sum_probs=199.3
Q ss_pred CCCccCCCCCCCCCcEEEEeccccCCCCCCCCCCCCCCCCCCCccceeeccCcCCCCcccCcceeeeEecccccccccCC
Q 003970 123 TGEVTPVQLAYGDDIVVGIFDTGVWPESESFQEEPSMSPIPSSWKGTCVRGEKFDPQKACNRKLIGARYYVKGFEEEYGP 202 (782)
Q Consensus 123 ~~~~~~~~~~~G~gV~VgVIDtGId~~Hp~f~d~~~~~~~~~~~~g~~~~g~~f~~~~~~n~kiig~~~~~~~~~~~~~~ 202 (782)
+...+|..+++|+||+|+|||||||++||+|.+. +...+.|.++
T Consensus 19 ~~~~~~~~~~~G~gv~VaViDtGid~~Hpdl~~~-----------------------------~~~~~d~~~~------- 62 (278)
T 2b6n_A 19 PLDNNYHTDYDGSGVTAFVIDTGVLNTHNEFGGR-----------------------------ASSGYDFIDN------- 62 (278)
T ss_dssp SCCSEEECSCCCTTCEEEEEESCCCTTCGGGTTC-----------------------------EEEEEETTTT-------
T ss_pred CcchhcccCCCCCCCEEEEEeCCCCCCChhHhcc-----------------------------cccCeecCCC-------
Confidence 3566899999999999999999999999999642 1222333221
Q ss_pred CCCCCCCCCCCCCCCCCCchhhhhhhccccccCCcccccCCcceeeecCCCeEEEEEeeeCCCCCCCCCHHHHHHHHHHH
Q 003970 203 LNASTNREYRSARDFLGHGTHTASTAAGSIAKNAGFFGLGRGIARGGAPRARLAVYKICWGKDSDGKCTEADILAAFDDA 282 (782)
Q Consensus 203 ~~~~~~~~~~~~~D~~gHGTHVAgiaag~~~~~~~~~G~~~g~~~GVAP~A~l~~~kv~~~~~~~~~~~~~~i~~ai~~a 282 (782)
..++.|..||||||||||+|+. .||||+|+|+.+|++++.+ .+..+++++||+|+
T Consensus 63 --------~~~~~d~~gHGT~vAgiia~~~--------------~GvAp~a~i~~~~v~~~~g---~~~~~~~~~ai~~a 117 (278)
T 2b6n_A 63 --------DYDATDCNGHGTHVAGTIGGST--------------YGVAKNVNVVGVRVLNCSG---SGSNSGVIAGINWV 117 (278)
T ss_dssp --------BSCCCCSSSHHHHHHHHHHCTT--------------TCSSTTCEEEEEECSCTTS---CCCHHHHHHHHHHH
T ss_pred --------CCCCCCCCCcHHHHHHHHHCCC--------------cCCCCCCeEEEEEEECCCC---CccHHHHHHHHHHH
Confidence 1245688999999999999862 6999999999999998776 57889999999999
Q ss_pred hh--cCCcEEEecccCCCCCCCCccChHHHHHHhhhccCceEEEecCCCCCCCCC-cccCCCceEEecccccCcccceeE
Q 003970 283 LH--DGVDVISASFGESPPLRPFFASNADIGSFNAMQHGVTVVFSGGNDGPEPSL-VQNVAPWSICVAASSIDRTFPTEI 359 (782)
Q Consensus 283 ~~--~gvdVIn~SlG~~~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~G~~~~~-~~~~ap~vitVgAs~~d~~~~~~~ 359 (782)
++ .+++|||||||... ...+..++.++.++|++||+||||+|..... .+...+++|+|||++.
T Consensus 118 ~~~~~g~~Vin~S~G~~~------~~~~~~ai~~a~~~gi~vV~AAGN~g~~~~~~~Pa~~~~vi~Vga~~~-------- 183 (278)
T 2b6n_A 118 KNNASGPAVANMSLGGGA------SQATDDAVNAAVAAGITFVVAAGNDNSNACNYSPARAADAITVGSTTS-------- 183 (278)
T ss_dssp HHHCCSSEEEEECCCEEC------CHHHHHHHHHHHHTTCEEEEECCSSSSBGGGEETTTCTTSEEEEEECT--------
T ss_pred HhCCCCCeEEEECCCCCc------CHHHHHHHHHHHHCCCEEEEEeCCCCCCCCCcCcccCCCeEEEEeeCC--------
Confidence 98 59999999999873 3567778888899999999999999975432 3445789999998541
Q ss_pred EeCCccEEEeeeeecccceeeEEEccccccCCccccCCCCCCCCCceEEEEeeCCCCccHHHHHHHHHHcCceEEEEecC
Q 003970 360 VVNSDFSIVGESFISTEVKAKLVEAFTYFADGICKCENWMGRKATGRVVLCFSTMGSVKTEEAEAAAKKANASGLIFAEP 439 (782)
Q Consensus 360 ~~~~~~~~~g~~~~~~~~~~~lv~~~~~~~~~~c~~~~~~~~~~~gkiv~~~~g~~~~~~~~k~~~~~~~Ga~g~i~~n~ 439 (782)
T Consensus 184 -------------------------------------------------------------------------------- 183 (278)
T 2b6n_A 184 -------------------------------------------------------------------------------- 183 (278)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCccccccccccEEEEehhhHHHHHHHHhcCCCCcEEEEccCccccCCCCCCccccccCCCCCCCCCCCcccceeecCce
Q 003970 440 MTELIAEVDIIPTVRIDIAQGTQLRDYLAQFPRLPIVQLKPSKTSIGKVPAPTVAYFSSRGPSSISPDILKPDITAPGIG 519 (782)
Q Consensus 440 ~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSS~Gp~~~~~~~~KPDI~APG~~ 519 (782)
.+.++.||++||. |||+|||++
T Consensus 184 --------------------------------------------------~~~~~~~S~~G~~--------~di~ApG~~ 205 (278)
T 2b6n_A 184 --------------------------------------------------NDSRSSFSNYGTC--------LDIYAPGSS 205 (278)
T ss_dssp --------------------------------------------------TSBBCTTCCBSTT--------CCEEEECSS
T ss_pred --------------------------------------------------CCCcCCcCCCCCC--------CeEEeCCCC
Confidence 2456899999986 699999999
Q ss_pred EEeecCCCCCCCCCCCCCCccceeeeccccchhhHHHHHHHHHHHhCCCCCHHHHHHHHHhccccC
Q 003970 520 VLAAWPPNTPPTLLPSDGRSVKWNFQSGTSMSCPHVSGVVALIKSAHPNWSPAAIRSALMTTAYTR 585 (782)
Q Consensus 520 I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~P~lsp~~Ik~~L~~TA~~~ 585 (782)
|+++++... ..|..++|||||||||||++|||+|++|+|++.|||++|++||++.
T Consensus 206 i~s~~~~~~-----------~~~~~~sGTS~AaP~vaG~aAll~~~~p~lt~~~v~~~L~~tA~~~ 260 (278)
T 2b6n_A 206 ITSSWYTSN-----------SATNTISGTSMASPHVAGVAALYLDENPNLSPAQVTNLLKTRATAD 260 (278)
T ss_dssp EEEECTTST-----------TCEEEECSHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHHSEES
T ss_pred eECcccCCC-----------CCEEEeCcHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHhCccC
Confidence 999987532 2799999999999999999999999999999999999999999864
No 28
>4dzt_A Aqualysin-1, aqualysin-I; serine protease, calcium binding, inhibitor, hydrolase-hydro inhibitor complex; HET: PMS; 1.95A {Thermus aquaticus}
Probab=100.00 E-value=9.6e-46 Score=391.72 Aligned_cols=238 Identities=26% Similarity=0.323 Sum_probs=201.6
Q ss_pred CCCccCCCCCCCCCcEEEEeccccCCCCCCCCCCCCCCCCCCCccceeeccCcCCCCcccCcceeeeEecccccccccCC
Q 003970 123 TGEVTPVQLAYGDDIVVGIFDTGVWPESESFQEEPSMSPIPSSWKGTCVRGEKFDPQKACNRKLIGARYYVKGFEEEYGP 202 (782)
Q Consensus 123 ~~~~~~~~~~~G~gV~VgVIDtGId~~Hp~f~d~~~~~~~~~~~~g~~~~g~~f~~~~~~n~kiig~~~~~~~~~~~~~~ 202 (782)
++..+|..+.+|+||+|+|||||||++||+|.+. +...+.|..
T Consensus 19 ~~~~a~~~~~~G~gv~VaViDtGvd~~h~~l~~~-----------------------------~~~~~~~~~-------- 61 (276)
T 4dzt_A 19 PLSNSYTYTATGRGVNVYVIDTGIRTTHREFGGR-----------------------------ARVGYDALG-------- 61 (276)
T ss_dssp SCCSCEECSCCCTTCEEEEEESCCCTTCGGGTTC-----------------------------EEEEEETTS--------
T ss_pred CcccceecCCCCCCcEEEEEccCCCCCChhHccC-----------------------------eeccccCCC--------
Confidence 5677999999999999999999999999999632 122222221
Q ss_pred CCCCCCCCCCCCCCCCCCchhhhhhhccccccCCcccccCCcceeeecCCCeEEEEEeeeCCCCCCCCCHHHHHHHHHHH
Q 003970 203 LNASTNREYRSARDFLGHGTHTASTAAGSIAKNAGFFGLGRGIARGGAPRARLAVYKICWGKDSDGKCTEADILAAFDDA 282 (782)
Q Consensus 203 ~~~~~~~~~~~~~D~~gHGTHVAgiaag~~~~~~~~~G~~~g~~~GVAP~A~l~~~kv~~~~~~~~~~~~~~i~~ai~~a 282 (782)
..+.|..||||||||||+|.. .||||+|+|+.+|++++.+ ....++++++++|+
T Consensus 62 ---------~~~~d~~gHGT~vAgiiag~~--------------~GvAp~a~l~~~~v~~~~~---~~~~~~~~~ai~~~ 115 (276)
T 4dzt_A 62 ---------GNGQDCNGHGTHVAGTIGGVT--------------YGVAKAVNLYAVRVLDCNG---SGSTSGVIAGVDWV 115 (276)
T ss_dssp ---------SCSCCSSSHHHHHHHHHHCTT--------------TCSSTTCEEEEEECSCTTS---CCCHHHHHHHHHHH
T ss_pred ---------CCCCCCCCCHHHHHHHHHccc--------------cCCCCCCEEEEEEEeCCCC---CcCHHHHHHHHHHH
Confidence 245678999999999999873 6999999999999998776 57899999999999
Q ss_pred hhc--CCcEEEecccCCCCCCCCccChHHHHHHhhhccCceEEEecCCCCCCCCCc-ccCCCceEEecccccCcccceeE
Q 003970 283 LHD--GVDVISASFGESPPLRPFFASNADIGSFNAMQHGVTVVFSGGNDGPEPSLV-QNVAPWSICVAASSIDRTFPTEI 359 (782)
Q Consensus 283 ~~~--gvdVIn~SlG~~~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~G~~~~~~-~~~ap~vitVgAs~~d~~~~~~~ 359 (782)
++. +++|||||||... ...+..++.++.++|+++|+||||+|...... +...+++|+|||++.
T Consensus 116 ~~~~~~~~vin~S~g~~~------~~~~~~a~~~a~~~gvlvv~AAGN~g~~~~~~~Pa~~~~vi~Vga~~~-------- 181 (276)
T 4dzt_A 116 TRNHRRPAVANMSLGGGV------STALDNAVKNSIAAGVVYAVAAGNDNANACNYSPARVAEALTVGATTS-------- 181 (276)
T ss_dssp HHHCCSSEEEEECCCEEC------CHHHHHHHHHHHHTTCEEEEECCSSSSBGGGEETTTCTTSEEEEEECT--------
T ss_pred HhcCCCCeEEEECCCCCC------CHHHHHHHHHHHhCCCEEEEECCCCCCCCCCcCcccCCCEEEEEEECC--------
Confidence 997 8999999999863 45677888889999999999999999754433 455789999998541
Q ss_pred EeCCccEEEeeeeecccceeeEEEccccccCCccccCCCCCCCCCceEEEEeeCCCCccHHHHHHHHHHcCceEEEEecC
Q 003970 360 VVNSDFSIVGESFISTEVKAKLVEAFTYFADGICKCENWMGRKATGRVVLCFSTMGSVKTEEAEAAAKKANASGLIFAEP 439 (782)
Q Consensus 360 ~~~~~~~~~g~~~~~~~~~~~lv~~~~~~~~~~c~~~~~~~~~~~gkiv~~~~g~~~~~~~~k~~~~~~~Ga~g~i~~n~ 439 (782)
T Consensus 182 -------------------------------------------------------------------------------- 181 (276)
T 4dzt_A 182 -------------------------------------------------------------------------------- 181 (276)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCccccccccccEEEEehhhHHHHHHHHhcCCCCcEEEEccCccccCCCCCCccccccCCCCCCCCCCCcccceeecCce
Q 003970 440 MTELIAEVDIIPTVRIDIAQGTQLRDYLAQFPRLPIVQLKPSKTSIGKVPAPTVAYFSSRGPSSISPDILKPDITAPGIG 519 (782)
Q Consensus 440 ~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSS~Gp~~~~~~~~KPDI~APG~~ 519 (782)
.+.++.||++||. +||+|||++
T Consensus 182 --------------------------------------------------~~~~~~~S~~g~~--------~dv~ApG~~ 203 (276)
T 4dzt_A 182 --------------------------------------------------SDARASFSNYGSC--------VDLFAPGAS 203 (276)
T ss_dssp --------------------------------------------------TSBBCTTCCBSTT--------CCEEEECSS
T ss_pred --------------------------------------------------CCCcCCcCCCCCC--------ceEEeCCCC
Confidence 3457899999997 599999999
Q ss_pred EEeecCCCCCCCCCCCCCCccceeeeccccchhhHHHHHHHHHHHhCCCCCHHHHHHHHHhccccCC
Q 003970 520 VLAAWPPNTPPTLLPSDGRSVKWNFQSGTSMSCPHVSGVVALIKSAHPNWSPAAIRSALMTTAYTRD 586 (782)
Q Consensus 520 I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~P~lsp~~Ik~~L~~TA~~~~ 586 (782)
|+++++.... .|..++|||||||||||++|||+|++|++++++||++|++||++..
T Consensus 204 i~s~~~~~~~-----------~~~~~sGTS~AaP~vaG~aAll~~~~p~lt~~~v~~~L~~tA~~~~ 259 (276)
T 4dzt_A 204 IPSAWYTSDT-----------ATQTLNGTSMATPHVAGVAALYLEQNPSATPASVASAILNGATTGR 259 (276)
T ss_dssp EEEECTTSSS-----------CEEEECSHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHHSEESC
T ss_pred eEccccCCCC-----------ceEEeeEHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHhhCcCCc
Confidence 9999876522 7999999999999999999999999999999999999999999764
No 29
>2oxa_A Extracellular serine protease; kexin, hydrolase; 1.65A {Aeromonas sobria} PDB: 3hjr_A
Probab=100.00 E-value=2.3e-45 Score=429.13 Aligned_cols=304 Identities=20% Similarity=0.173 Sum_probs=206.6
Q ss_pred CCCCccCCCCCCCCCcEEEEeccccCCCCCCCCCCCCCCCCCCCccceeeccCcCCCCcccCcceeeeEecccccccccC
Q 003970 122 NTGEVTPVQLAYGDDIVVGIFDTGVWPESESFQEEPSMSPIPSSWKGTCVRGEKFDPQKACNRKLIGARYYVKGFEEEYG 201 (782)
Q Consensus 122 ~~~~~~~~~~~~G~gV~VgVIDtGId~~Hp~f~d~~~~~~~~~~~~g~~~~g~~f~~~~~~n~kiig~~~~~~~~~~~~~ 201 (782)
+++..+|..+++|+||+|||||||||++||+|.+.. ..+.++|..+.
T Consensus 57 in~~~aw~~g~~G~gV~VaViDtGid~~Hpdl~~~~----------------------------~~~~~~~~~~~----- 103 (600)
T 2oxa_A 57 LNLWWAHRTGVLGHGVNVAVVDDGLAIAHPDLADNV----------------------------RPGSKNVVTGS----- 103 (600)
T ss_dssp CCCHHHHHTTCSCTTCEEEEESSCCCTTCTTTGGGB----------------------------CSCCBCTTTCS-----
T ss_pred cChHHHHhcCCCCCCcEEEEecCCcCCCCcchhhcc----------------------------ccCceeccCCC-----
Confidence 467889999999999999999999999999997432 01112222111
Q ss_pred CCCCCCCCCCCCCCC-CCCCchhhhhhhccccccCCcccccCCcceeeecCCCeEEEEEeeeCCCCCCCCCHHHHHHHHH
Q 003970 202 PLNASTNREYRSARD-FLGHGTHTASTAAGSIAKNAGFFGLGRGIARGGAPRARLAVYKICWGKDSDGKCTEADILAAFD 280 (782)
Q Consensus 202 ~~~~~~~~~~~~~~D-~~gHGTHVAgiaag~~~~~~~~~G~~~g~~~GVAP~A~l~~~kv~~~~~~~~~~~~~~i~~ai~ 280 (782)
....|.| ..||||||||||||. .++. .+.||||+|+|+.+|+++..+.. .....+++...
T Consensus 104 --------~d~~p~d~~~gHGT~vAGiiaa~-~n~~--------g~~GVAp~A~l~~vkv~~~~~~~--~~~~~~~~~~~ 164 (600)
T 2oxa_A 104 --------DDPTPTDPDTGHGTSVSGIIAAV-DNAI--------GTKGIAPRAQLQGFNLLDDNSQQ--LQKDWLYALGD 164 (600)
T ss_dssp --------SCCCCCSTTCCHHHHHHHHHHCC-SSSS--------SCCCSSTTCEEEEECTTSTTCCC--CHHHHHHHTTT
T ss_pred --------CCCCCCCCCCCCccHHHHHhhcc-cCCC--------cceEEccCCceEEEeeecCcccc--hHHHHHHHHhh
Confidence 1123444 789999999999998 3322 25899999999999999876521 12234444444
Q ss_pred HHhhcCCcEEEecccCCCCCCCCcc---ChHHHHHHh---hhccCceEEEecCCCCCCCC--------------------
Q 003970 281 DALHDGVDVISASFGESPPLRPFFA---SNADIGSFN---AMQHGVTVVFSGGNDGPEPS-------------------- 334 (782)
Q Consensus 281 ~a~~~gvdVIn~SlG~~~~~~~~~~---~~~~~a~~~---a~~~Gi~vV~AAGN~G~~~~-------------------- 334 (782)
.+..++++|||||||.......... ..+..++.. +.++|++||+||||+|....
T Consensus 165 ~a~~~~~~Vin~S~G~~~~~~~~~~~~~~~~~~~~~~~~~a~~~GilvV~AAGN~g~~~~~~~~~~~Pa~~~~~~p~~~~ 244 (600)
T 2oxa_A 165 SNASRDNRVFNHSYRMSVVDPRSANSLDQSQLDRLFEQQTLKAQGAAYIKAAGNGFNKIAAGGYVLNRTGNGPKLPFENS 244 (600)
T ss_dssp SHHHHTCSEEEECCCCCCSSCCCSCSHHHHHHHHHHHHHHHSTTCCEEEEECCSCSSEEEETTEEEEEESCSSCCCSSBT
T ss_pred hhcccCCeEEEEeccCCCCCccccCchhHHHHHHHHHHHHhccCCcEEEEecCCCCccCCCCcceecCcccccccccccc
Confidence 5777899999999998742011111 222222222 45789999999999986311
Q ss_pred --CcccCCCceEEecccccCcccceeEEeCCccEEEeeeeecccceeeEEEccccccCCccccCCCCCCCCCceEEEEee
Q 003970 335 --LVQNVAPWSICVAASSIDRTFPTEIVVNSDFSIVGESFISTEVKAKLVEAFTYFADGICKCENWMGRKATGRVVLCFS 412 (782)
Q Consensus 335 --~~~~~ap~vitVgAs~~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~lv~~~~~~~~~~c~~~~~~~~~~~gkiv~~~~ 412 (782)
...+.++|+|+|||++.
T Consensus 245 n~~~~~~s~~vItVgA~~~------------------------------------------------------------- 263 (600)
T 2oxa_A 245 NLDPSNSNFWNLVVSALNA------------------------------------------------------------- 263 (600)
T ss_dssp TSSGGGGSSSEEEEEEECT-------------------------------------------------------------
T ss_pred ccCCcccCceeEEEecccC-------------------------------------------------------------
Confidence 11122456777777431
Q ss_pred CCCCccHHHHHHHHHHcCceEEEEecCCCccccccccccEEEEehhhHHHHHHHHhcCCCCcEEEEccCccccCCCCCCc
Q 003970 413 TMGSVKTEEAEAAAKKANASGLIFAEPMTELIAEVDIIPTVRIDIAQGTQLRDYLAQFPRLPIVQLKPSKTSIGKVPAPT 492 (782)
Q Consensus 413 g~~~~~~~~k~~~~~~~Ga~g~i~~n~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 492 (782)
.+.
T Consensus 264 -----------------------------------------------------------------------------~g~ 266 (600)
T 2oxa_A 264 -----------------------------------------------------------------------------DGV 266 (600)
T ss_dssp -----------------------------------------------------------------------------TSS
T ss_pred -----------------------------------------------------------------------------CCC
Confidence 346
Q ss_pred cccccCCCCCCCCCCCcccceeecCceEEeecC-------CCCCCC--------------CCCCCCCccceeeeccccch
Q 003970 493 VAYFSSRGPSSISPDILKPDITAPGIGVLAAWP-------PNTPPT--------------LLPSDGRSVKWNFQSGTSMS 551 (782)
Q Consensus 493 ~a~fSS~Gp~~~~~~~~KPDI~APG~~I~sa~~-------~~~~~~--------------~~~~~~~~~~y~~~sGTSmA 551 (782)
++.||++||+. ||+|||++|.++.+ .+.... ....+.....|..++|||||
T Consensus 267 ~a~fS~~G~~v--------dv~APG~~i~~~~p~i~ttd~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~y~~~sGTS~A 338 (600)
T 2oxa_A 267 RSSYSSVGSNI--------FLSATGGEYGTDTPAMVTTDLPGCDMGYNRTDDPSTNRLHGNSQLDASCDYNGVMNGTSSA 338 (600)
T ss_dssp BCTTCCBCTTE--------EEEEECCSCSSSSCCEEEECCSSTTSSSSSTTSCCSSTTTTCTTTCTTCCEEEEECSHHHH
T ss_pred cCCcCCCCCCe--------EEEeccCCCCcCCCceEeccccccccccccccccccccccccccccCCcccccccccchHH
Confidence 78999999984 99999998544332 110000 00011112348999999999
Q ss_pred hhHHHHHHHHHHHhCCCCCHHHHHHHHHhccccCCCCCCccc-----------------cC--CCCCcCCCCCccccccC
Q 003970 552 CPHVSGVVALIKSAHPNWSPAAIRSALMTTAYTRDTSHDSIL-----------------AG--GSMKVSDPFDIGAGHIN 612 (782)
Q Consensus 552 aP~VAG~aALl~q~~P~lsp~~Ik~~L~~TA~~~~~~g~~~~-----------------~~--~~~~~~~~~~~G~G~vn 612 (782)
||||||++|||+|++|+|++++||++|++||++++..+.++. ++ .......+..||||+||
T Consensus 339 aP~VAGvaALl~s~~P~lt~~~vk~~L~~tA~~~~~~~~~~~~~~~~~~G~~~~~~~~~~w~~n~~g~~~~~~~G~G~vd 418 (600)
T 2oxa_A 339 TPSTSGAMALLMSAYPDLSVRDLRDLLARSATRVDAKHQPVMVSYTSSTGKVRDVKGLEGWERNAAGMWFSPTYGFGLID 418 (600)
T ss_dssp HHHHHHHHHHHHHHSTTSCHHHHHHHHHHHCBCCSTTCCCEEEEEECTTSCEEEEEEECCSEECTTSCEEBTTTBTCBCC
T ss_pred hHHHHHHHHHHHHhCCCCCHHHHHHHHHHhCccCCcccccccccccccccccccccccccccccCCCccccccCCCchhh
Confidence 999999999999999999999999999999999875542211 00 11122245789999999
Q ss_pred ccccCCCceee
Q 003970 613 PMKAMDPGLIY 623 (782)
Q Consensus 613 ~~~Al~~glv~ 623 (782)
+.+|++....+
T Consensus 419 a~~Av~~A~~~ 429 (600)
T 2oxa_A 419 VNKALELAANH 429 (600)
T ss_dssp HHHHHHHHTTC
T ss_pred HHHHHHHHHhc
Confidence 99999854443
No 30
>1p8j_A Furin precursor; prohormone convertase, SPC1, PACE, P-domain; HET: DKA AR7 NAG FUL BMA MAN GAL FUC; 2.60A {Mus musculus} SCOP: b.18.1.20 c.41.1.1
Probab=100.00 E-value=1.7e-45 Score=418.24 Aligned_cols=296 Identities=17% Similarity=0.147 Sum_probs=217.4
Q ss_pred CCCCccCCCCCCCCCcEEEEeccccCCCCCCCCCCCCCCCCCCCccceeeccCcCCCCcccCcceeeeEecccccccccC
Q 003970 122 NTGEVTPVQLAYGDDIVVGIFDTGVWPESESFQEEPSMSPIPSSWKGTCVRGEKFDPQKACNRKLIGARYYVKGFEEEYG 201 (782)
Q Consensus 122 ~~~~~~~~~~~~G~gV~VgVIDtGId~~Hp~f~d~~~~~~~~~~~~g~~~~g~~f~~~~~~n~kiig~~~~~~~~~~~~~ 201 (782)
+++..+|..+++|+||+|||||||||++||+|.+.. .+ ...+.|.+....
T Consensus 25 i~~~~aw~~g~~G~gv~VaViDtGvd~~Hpdl~~~~--~~-------------------------~~~~d~~~~~~~--- 74 (471)
T 1p8j_A 25 LNVKEAWAQGFTGHGIVVSILDDGIEKNHPDLAGNY--DP-------------------------GASFDVNDQDPD--- 74 (471)
T ss_dssp CCCHHHHHTTCSCTTCEEEEEEBCCCTTCTTTGGGB--CG-------------------------GGCEETTTTBSC---
T ss_pred CChHHHHhcCCCCCCCEEEEEeCCcCCCChhHhhcc--Cc-------------------------cCcccccCCCCC---
Confidence 478889999999999999999999999999997532 00 001222221100
Q ss_pred CCCCCCCCCCCCCCCCCCCchhhhhhhccccccCCcccccCCcceeeecCCCeEEEEEeeeCCCCCCCCCHHHHHHHHHH
Q 003970 202 PLNASTNREYRSARDFLGHGTHTASTAAGSIAKNAGFFGLGRGIARGGAPRARLAVYKICWGKDSDGKCTEADILAAFDD 281 (782)
Q Consensus 202 ~~~~~~~~~~~~~~D~~gHGTHVAgiaag~~~~~~~~~G~~~g~~~GVAP~A~l~~~kv~~~~~~~~~~~~~~i~~ai~~ 281 (782)
..+...+.|..||||||||||||...++. .+.||||+|+|+.+|+++ +..+++++|+++
T Consensus 75 ------p~~~~~~~d~~gHGT~vAGiiaa~~~n~~--------g~~GvAp~a~i~~~rv~~-------g~~~~~~~ai~~ 133 (471)
T 1p8j_A 75 ------PQPRYTQMNDNRHGTRCAGEVAAVANNGV--------CGVGVAYNARIGGVRMLD-------GEVTDAVEARSL 133 (471)
T ss_dssp ------CCCCCCTTCTTCHHHHHHHHHHCCSSSSS--------SCCCTTTTSEEEEEECSS-------SCCCHHHHHHHH
T ss_pred ------CCCccCCCCCCCcHHHHHHHHHeeccCCC--------CCEEECCCCeEEEEEccC-------CchhHHHHHHHh
Confidence 00112456889999999999999754332 258999999999999985 335689999999
Q ss_pred Hhh-cCCcEEEecccCCCCCCC--CccChHHHHHHhhhc-----cCceEEEecCCCCCCCCC--c--ccCCCceEEeccc
Q 003970 282 ALH-DGVDVISASFGESPPLRP--FFASNADIGSFNAMQ-----HGVTVVFSGGNDGPEPSL--V--QNVAPWSICVAAS 349 (782)
Q Consensus 282 a~~-~gvdVIn~SlG~~~~~~~--~~~~~~~~a~~~a~~-----~Gi~vV~AAGN~G~~~~~--~--~~~ap~vitVgAs 349 (782)
+++ ++++|||||||....... .....+..++.++.+ +|++||+||||+|..... . ...++++|+|||+
T Consensus 134 a~~~~~~~Vin~S~G~~~~~~~~~~~~~~~~~a~~~a~~~~~~~~GvlvV~AAGN~g~~~~~~~~~~~~~~~~vItVgA~ 213 (471)
T 1p8j_A 134 GLNPNHIHIYSASWGPEDDGKTVDGPARLAEEAFFRGVSQGRGGLGSIFVWASGNGGREHDSCNCDGYTNSIYTLSISSA 213 (471)
T ss_dssp TSCTTTCCEEEECCBSCCSSSCCBCCCHHHHHHHHHHHHHHHHHTCCEEEEECCSCGGGTCBGGGBTTTTSTTEEEEEEE
T ss_pred hhccCCCeEEEeccCcCCCCCcccCcHHHHHHHHHHHHHhhccCCCeEEEEeCCCCCCCCCCcCcCcccCCCceEEEecc
Confidence 999 999999999998631000 112233445555543 699999999999965322 1 1235899999985
Q ss_pred ccCcccceeEEeCCccEEEeeeeecccceeeEEEccccccCCccccCCCCCCCCCceEEEEeeCCCCccHHHHHHHHHHc
Q 003970 350 SIDRTFPTEIVVNSDFSIVGESFISTEVKAKLVEAFTYFADGICKCENWMGRKATGRVVLCFSTMGSVKTEEAEAAAKKA 429 (782)
Q Consensus 350 ~~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~lv~~~~~~~~~~c~~~~~~~~~~~gkiv~~~~g~~~~~~~~k~~~~~~~ 429 (782)
+.
T Consensus 214 ~~------------------------------------------------------------------------------ 215 (471)
T 1p8j_A 214 TQ------------------------------------------------------------------------------ 215 (471)
T ss_dssp CT------------------------------------------------------------------------------
T ss_pred cC------------------------------------------------------------------------------
Confidence 42
Q ss_pred CceEEEEecCCCccccccccccEEEEehhhHHHHHHHHhcCCCCcEEEEccCccccCCCCCCccccccCCCCCCCCCCCc
Q 003970 430 NASGLIFAEPMTELIAEVDIIPTVRIDIAQGTQLRDYLAQFPRLPIVQLKPSKTSIGKVPAPTVAYFSSRGPSSISPDIL 509 (782)
Q Consensus 430 Ga~g~i~~n~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSS~Gp~~~~~~~~ 509 (782)
.+.++.||++||.. ....
T Consensus 216 ------------------------------------------------------------~g~~a~~S~~g~~~--~~~~ 233 (471)
T 1p8j_A 216 ------------------------------------------------------------FGNVPWYSEACSST--LATT 233 (471)
T ss_dssp ------------------------------------------------------------TSCCCTTCCBCTTC--CEEE
T ss_pred ------------------------------------------------------------CCCcccccCCCCcc--eEEe
Confidence 34568999999985 3455
Q ss_pred ccceeecCceEEeecCCCCCCCCCCCCCCccceeeeccccchhhHHHHHHHHHHHhCCCCCHHHHHHHHHhccccCCCCC
Q 003970 510 KPDITAPGIGVLAAWPPNTPPTLLPSDGRSVKWNFQSGTSMSCPHVSGVVALIKSAHPNWSPAAIRSALMTTAYTRDTSH 589 (782)
Q Consensus 510 KPDI~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~P~lsp~~Ik~~L~~TA~~~~~~g 589 (782)
+|...+||.+|+++.+.+ ..|..++|||||||||||++|||+|++|+|++++||++|++||++.+...
T Consensus 234 ~~~~~~~g~~i~st~~~~------------~~~~~~sGTS~AaP~VAG~aALl~~~~p~lt~~~v~~~L~~tA~~~~~~~ 301 (471)
T 1p8j_A 234 YSSGNQNEKQIVTTDLRQ------------KCTESHTGTSASAPLAAGIIALTLEANKNLTWRDMQHLVVQTSKPAHLNA 301 (471)
T ss_dssp ECCCSTTSCCEEEEETTT------------EEEEEECSHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHHCBCTTCCC
T ss_pred CCCCCCCCCCEEEeeCCC------------CccccCCCcccccchhhhHHHHHHhhCCCCCHHHHHHHHHhcCccCCCCC
Confidence 666677778999998753 26899999999999999999999999999999999999999999876543
Q ss_pred CccccCCCCCcCCCCCccccccCccccCCCce
Q 003970 590 DSILAGGSMKVSDPFDIGAGHINPMKAMDPGL 621 (782)
Q Consensus 590 ~~~~~~~~~~~~~~~~~G~G~vn~~~Al~~gl 621 (782)
..+... ......+..||||+||+.+|++...
T Consensus 302 ~~~~~n-~~g~~~~~~~G~G~vda~~Av~~a~ 332 (471)
T 1p8j_A 302 DDWATN-GVGRKVSHSYGYGLLDAGAMVALAQ 332 (471)
T ss_dssp SCCEEC-TTSCEEBTTTBTCBCCHHHHHHHHH
T ss_pred CCceec-CCCcccCCCCCCEEEcHhHHHHHhh
Confidence 222221 1112235689999999999998543
No 31
>2qtw_B Proprotein convertase subtilisin/kexin type 9; coronary heart disease, hypercholest low density lipoprotein receptor, autocatalytic cleavage; HET: NAG; 1.90A {Homo sapiens} PDB: 3m0c_B 3bps_A 3gcw_A 3gcx_A 3p5b_A 3p5c_A 2pmw_B 3h42_B 2w2n_A 2w2m_A 2w2p_A 2w2q_A 2xtj_A 2w2o_A
Probab=100.00 E-value=1.1e-44 Score=407.16 Aligned_cols=246 Identities=22% Similarity=0.205 Sum_probs=187.5
Q ss_pred cCCCCCCCCCcEEEEeccccCCCCCCCCCCCCCCCCCCCccceeeccCcCCCCcccCcceeeeEecccccccccCCCCCC
Q 003970 127 TPVQLAYGDDIVVGIFDTGVWPESESFQEEPSMSPIPSSWKGTCVRGEKFDPQKACNRKLIGARYYVKGFEEEYGPLNAS 206 (782)
Q Consensus 127 ~~~~~~~G~gV~VgVIDtGId~~Hp~f~d~~~~~~~~~~~~g~~~~g~~f~~~~~~n~kiig~~~~~~~~~~~~~~~~~~ 206 (782)
.|..+.+|+||+|+|||||||++||+|.+.. .+ .+...+.+....
T Consensus 18 aw~~~~tG~GV~VaVIDTGId~~HpdL~gr~-------~~--------------------~~~~~v~~~dg~-------- 62 (546)
T 2qtw_B 18 EYQPPDGGSLVEVYLLDTSIQSDHREIEGRV-------MV--------------------TDFENVPEEDGT-------- 62 (546)
T ss_dssp ------CCTTSEEEEEESCCCTTSTTTTTTE-------EE--------------------EEEECCCCCC----------
T ss_pred hcccCCCCCCcEEEEECCCCCCCChHHcccc-------cc--------------------cCcccccCCCCc--------
Confidence 7888999999999999999999999997432 00 000001000000
Q ss_pred CCCCCCCCCCCCCCchhhhhhhccccccCCcccccCCcceeeecCCCeEEEEEeeeCCCCCCCCCHHHHHHHHHHHhhc-
Q 003970 207 TNREYRSARDFLGHGTHTASTAAGSIAKNAGFFGLGRGIARGGAPRARLAVYKICWGKDSDGKCTEADILAAFDDALHD- 285 (782)
Q Consensus 207 ~~~~~~~~~D~~gHGTHVAgiaag~~~~~~~~~G~~~g~~~GVAP~A~l~~~kv~~~~~~~~~~~~~~i~~ai~~a~~~- 285 (782)
.....+.|..||||||||||+|+. .||||+|+|+.+|+++..+ .++.+++++||+|+++.
T Consensus 63 --~f~~~~~D~~GHGThVAGIIag~~--------------~GVAP~A~L~~vkVl~~~G---~g~~s~ii~ai~~a~~~~ 123 (546)
T 2qtw_B 63 --RFHRQASKCDSHGTHLAGVVSGRD--------------AGVAKGASMRSLRVLNCQG---KGTVSGTLIGLEFIRKSQ 123 (546)
T ss_dssp -------CTTTTHHHHHHHHHHHCTT--------------TCSSTTCEEEEEECSCTTS---EEEHHHHHHHHHHHHHHH
T ss_pred --cccCCCCCCCChHHHHHHHHhccC--------------CCcCCCCEEEEEEEECCCC---CcCHHHHHHHHHHHHHhh
Confidence 001245688999999999999873 6999999999999998766 57789999999999984
Q ss_pred -----CCcEEEecccCCCCCCCCccChHHHHHHhhhccCceEEEecCCCCCCCCC-cccCCCceEEecccccCcccceeE
Q 003970 286 -----GVDVISASFGESPPLRPFFASNADIGSFNAMQHGVTVVFSGGNDGPEPSL-VQNVAPWSICVAASSIDRTFPTEI 359 (782)
Q Consensus 286 -----gvdVIn~SlG~~~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~G~~~~~-~~~~ap~vitVgAs~~d~~~~~~~ 359 (782)
+++|||||||... ...+..++.++.++|++||+||||+|..... .+...+++|+|||++.+...
T Consensus 124 ~~~~~g~~VINmSlGg~~------s~~l~~Ai~~A~~~GvlvVaAAGN~g~d~~~~sPAs~~~VItVGA~d~~g~~---- 193 (546)
T 2qtw_B 124 LVQPVGPLVVLLPLAGGY------SRVLNAACQRLARAGVVLVTAAGNFRDDACLYSPASAPEVITVGATNAQDQP---- 193 (546)
T ss_dssp HHSCCSCEEEEECEEEEC------CHHHHHHHHHHHHTTCEEEEECCSBSSBGGGEETTTCTTSEEEEEECTTSCB----
T ss_pred hhccCCCeEEEecCCCCC------cHHHHHHHHHHHhCCCEEEEECCCCCCCCCccCcccCCCEEEEEEecCCCCc----
Confidence 8999999999762 3567778888999999999999999975432 34557999999996532100
Q ss_pred EeCCccEEEeeeeecccceeeEEEccccccCCccccCCCCCCCCCceEEEEeeCCCCccHHHHHHHHHHcCceEEEEecC
Q 003970 360 VVNSDFSIVGESFISTEVKAKLVEAFTYFADGICKCENWMGRKATGRVVLCFSTMGSVKTEEAEAAAKKANASGLIFAEP 439 (782)
Q Consensus 360 ~~~~~~~~~g~~~~~~~~~~~lv~~~~~~~~~~c~~~~~~~~~~~gkiv~~~~g~~~~~~~~k~~~~~~~Ga~g~i~~n~ 439 (782)
T Consensus 194 -------------------------------------------------------------------------------- 193 (546)
T 2qtw_B 194 -------------------------------------------------------------------------------- 193 (546)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCccccccccccEEEEehhhHHHHHHHHhcCCCCcEEEEccCccccCCCCCCccccccCCCCCCCCCCCcccceeecCce
Q 003970 440 MTELIAEVDIIPTVRIDIAQGTQLRDYLAQFPRLPIVQLKPSKTSIGKVPAPTVAYFSSRGPSSISPDILKPDITAPGIG 519 (782)
Q Consensus 440 ~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSS~Gp~~~~~~~~KPDI~APG~~ 519 (782)
...-..||++||. |||+|||++
T Consensus 194 --------------------------------------------------a~~s~~fSn~G~~--------vDI~APG~~ 215 (546)
T 2qtw_B 194 --------------------------------------------------VTLGTLGTNFGRC--------VDLFAPGED 215 (546)
T ss_dssp --------------------------------------------------CEETTEECCBSTT--------CCEEEECSS
T ss_pred --------------------------------------------------ccccCCcCCCCCc--------ceEEecCcc
Confidence 0001238999984 799999999
Q ss_pred EEeecCCCCCCCCCCCCCCccceeeeccccchhhHHHHHHHHHHHhCCCCCHHHHHHHHHhccccC
Q 003970 520 VLAAWPPNTPPTLLPSDGRSVKWNFQSGTSMSCPHVSGVVALIKSAHPNWSPAAIRSALMTTAYTR 585 (782)
Q Consensus 520 I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~P~lsp~~Ik~~L~~TA~~~ 585 (782)
|+++++... ..|..++|||||||||||++|||+|++|+|+|+|||++|++||.+.
T Consensus 216 I~St~~~~~-----------~~y~~~SGTSmAAP~VAG~aALlls~~P~ltp~qVr~~L~~tAt~~ 270 (546)
T 2qtw_B 216 IIGASSDCS-----------TCFVSQSGTSQAAAHVAGIAAMMLSAEPELTLAELRQRLIHFSAKD 270 (546)
T ss_dssp EEEECTTST-----------TCEEEECSHHHHHHHHHHHHHHHHHHSTTCCHHHHHHHHHHTSEES
T ss_pred EEeeccCCC-----------CcEeeeCcCcHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHhcccc
Confidence 999998642 2799999999999999999999999999999999999999999864
No 32
>2id4_A Kexin; KEX2, kexin, furin, proprotein, prohormone, convertase, SUBT like protease, serine protease; HET: NDG; 1.90A {Saccharomyces cerevisiae} SCOP: b.18.1.20 c.41.1.1 PDB: 1r64_A* 1ot5_A*
Probab=100.00 E-value=9.4e-45 Score=414.77 Aligned_cols=288 Identities=19% Similarity=0.153 Sum_probs=214.5
Q ss_pred CCCCccCCCCCCCCCcEEEEeccccCCCCCCCCCCCCCCCCCCCccceeeccCcCCCCcccCcceeeeEecccccccccC
Q 003970 122 NTGEVTPVQLAYGDDIVVGIFDTGVWPESESFQEEPSMSPIPSSWKGTCVRGEKFDPQKACNRKLIGARYYVKGFEEEYG 201 (782)
Q Consensus 122 ~~~~~~~~~~~~G~gV~VgVIDtGId~~Hp~f~d~~~~~~~~~~~~g~~~~g~~f~~~~~~n~kiig~~~~~~~~~~~~~ 201 (782)
+++..+|..+++|+||+|||||||||++||+|.+.. +. .+.+.|.++..
T Consensus 41 i~~~~aw~~g~tG~gv~VaViDtGvd~~Hpdl~~~~--------~~-------------------~~~~d~~~~~~---- 89 (503)
T 2id4_A 41 INVLDLWYNNITGAGVVAAIVDDGLDYENEDLKDNF--------CA-------------------EGSWDFNDNTN---- 89 (503)
T ss_dssp CCCHHHHHTTCSCTTCEEEEEESCCCTTSTTTTTTB--------CG-------------------GGCEETTTTBS----
T ss_pred cChHHHHhcCCCCCCeEEEEEeCCCCCCChhHhhcc--------cc-------------------cCcccCCCCCC----
Confidence 467889999999999999999999999999997542 00 01122222110
Q ss_pred CCCCCCCCCCCCCCCCCCCchhhhhhhccccccCCcccccCCcceeeecCCCeEEEEEeeeCCCCCCCCCHHHHHHHHHH
Q 003970 202 PLNASTNREYRSARDFLGHGTHTASTAAGSIAKNAGFFGLGRGIARGGAPRARLAVYKICWGKDSDGKCTEADILAAFDD 281 (782)
Q Consensus 202 ~~~~~~~~~~~~~~D~~gHGTHVAgiaag~~~~~~~~~G~~~g~~~GVAP~A~l~~~kv~~~~~~~~~~~~~~i~~ai~~ 281 (782)
+.....|..||||||||||||...++. .+.||||+|+|+.+|+++. .+...++++||+|
T Consensus 90 --------~~~p~~d~~gHGT~vAGiiaa~~~n~~--------~~~GvAp~a~i~~~rv~~~-----~~~~~~~~~ai~~ 148 (503)
T 2id4_A 90 --------LPKPRLSDDYHGTRCAGEIAAKKGNNF--------CGVGVGYNAKISGIRILSG-----DITTEDEAASLIY 148 (503)
T ss_dssp --------CCCCCSTTTTHHHHHHHHHHCCSSSSS--------SCCCTTTTSEEEEEECTTS-----CCCHHHHHHHTTT
T ss_pred --------CCCCCCCCCChHHHHHHHHHhccCCCC--------CcEEECCCCEEEEEEeeCC-----CCChHHHHHHHHh
Confidence 111235788999999999999764332 2479999999999999863 2678899999999
Q ss_pred HhhcCCcEEEecccCCCCCC--CCccChHHHHHHhhh-----ccCceEEEecCCCCCCCCC--ccc--CCCceEEecccc
Q 003970 282 ALHDGVDVISASFGESPPLR--PFFASNADIGSFNAM-----QHGVTVVFSGGNDGPEPSL--VQN--VAPWSICVAASS 350 (782)
Q Consensus 282 a~~~gvdVIn~SlG~~~~~~--~~~~~~~~~a~~~a~-----~~Gi~vV~AAGN~G~~~~~--~~~--~ap~vitVgAs~ 350 (782)
|++++ +|||||||...... ......+..++.++. .+|++||+||||+|..... .+. .++++|+|||++
T Consensus 149 a~~~~-~Iin~S~G~~~~~~~~~~~~~~~~~a~~~a~~~~r~~~GvlvV~AAGN~g~~~~~~~~~~~~~~~~vI~VgA~~ 227 (503)
T 2id4_A 149 GLDVN-DIYSCSWGPADDGRHLQGPSDLVKKALVKGVTEGRDSKGAIYVFASGNGGTRGDNCNYDGYTNSIYSITIGAID 227 (503)
T ss_dssp TTTTC-SEEEECEESCCSSSCCBCCCHHHHHHHHHHHHHHHHHTCCEEEEECCSCGGGTCCGGGBTTTTCTTEEEEEEEC
T ss_pred HhhcC-CEEEeCCCcCCCCccccCchHHHHHHHHHHHHhcccCCCcEEEEecCCCCCcCCCCCCCcccCCCCEEEEEeeC
Confidence 99998 99999999863100 111233555666665 4799999999999965322 222 357899999854
Q ss_pred cCcccceeEEeCCccEEEeeeeecccceeeEEEccccccCCccccCCCCCCCCCceEEEEeeCCCCccHHHHHHHHHHcC
Q 003970 351 IDRTFPTEIVVNSDFSIVGESFISTEVKAKLVEAFTYFADGICKCENWMGRKATGRVVLCFSTMGSVKTEEAEAAAKKAN 430 (782)
Q Consensus 351 ~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~lv~~~~~~~~~~c~~~~~~~~~~~gkiv~~~~g~~~~~~~~k~~~~~~~G 430 (782)
.
T Consensus 228 ~------------------------------------------------------------------------------- 228 (503)
T 2id4_A 228 H------------------------------------------------------------------------------- 228 (503)
T ss_dssp T-------------------------------------------------------------------------------
T ss_pred C-------------------------------------------------------------------------------
Confidence 2
Q ss_pred ceEEEEecCCCccccccccccEEEEehhhHHHHHHHHhcCCCCcEEEEccCccccCCCCCCccccccCCCCCCCCCCCcc
Q 003970 431 ASGLIFAEPMTELIAEVDIIPTVRIDIAQGTQLRDYLAQFPRLPIVQLKPSKTSIGKVPAPTVAYFSSRGPSSISPDILK 510 (782)
Q Consensus 431 a~g~i~~n~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSS~Gp~~~~~~~~K 510 (782)
.+.++.||++||..
T Consensus 229 -----------------------------------------------------------~~~~a~~S~~g~~~------- 242 (503)
T 2id4_A 229 -----------------------------------------------------------KDLHPPYSEGCSAV------- 242 (503)
T ss_dssp -----------------------------------------------------------TSCCCTTCCCCTTE-------
T ss_pred -----------------------------------------------------------CCCcCCcCCCCCcc-------
Confidence 33568999999984
Q ss_pred cceee----cCceEEeecCCCCCCCCCCCCCCccceeeeccccchhhHHHHHHHHHHHhCCCCCHHHHHHHHHhccccCC
Q 003970 511 PDITA----PGIGVLAAWPPNTPPTLLPSDGRSVKWNFQSGTSMSCPHVSGVVALIKSAHPNWSPAAIRSALMTTAYTRD 586 (782)
Q Consensus 511 PDI~A----PG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~P~lsp~~Ik~~L~~TA~~~~ 586 (782)
|++| ||..|+++...+ ..|..++|||||||||||++|||+|++|+|++++||++|++||+++.
T Consensus 243 -~~~a~~~gpG~~I~st~~~~------------~~~~~~sGTS~AaP~VAG~aALl~~~~p~lt~~~v~~~L~~tA~~~~ 309 (503)
T 2id4_A 243 -MAVTYSSGSGEYIHSSDING------------RCSNSHGGTSAAAPLAAGVYTLLLEANPNLTWRDVQYLSILSAVGLE 309 (503)
T ss_dssp -EEEEECSBTTBCEEEECSTT------------CEEEEECSHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHHCBCCT
T ss_pred -eEeecCCCCCCceEeecCCC------------CceecCCCccccchhhhHHHHHHHHhCCCCCHHHHHHHHHhccccCC
Confidence 8887 899999995432 17999999999999999999999999999999999999999999876
Q ss_pred CC-CCccccCCCCCcCCCCCccccccCccccCCCce
Q 003970 587 TS-HDSILAGGSMKVSDPFDIGAGHINPMKAMDPGL 621 (782)
Q Consensus 587 ~~-g~~~~~~~~~~~~~~~~~G~G~vn~~~Al~~gl 621 (782)
.. ...+.. .......+..||||+||+.+|++...
T Consensus 310 ~~~~~~~~~-~~~g~~~~~~~G~G~vda~~Av~~a~ 344 (503)
T 2id4_A 310 KNADGDWRD-SAMGKKYSHRYGFGKIDAHKLIEMSK 344 (503)
T ss_dssp TCGGGCCEE-CSSSSEEBTTTBTCBCCHHHHHHHHT
T ss_pred CCcCCCcee-cCCCCccCcccCCcEecHHHHHHHHh
Confidence 43 111111 11112234579999999999998543
No 33
>3f7m_A Alkaline serine protease VER112; verticillium psalliotae, cuticle- degrading protease, nematodes, hydrolase, secreted, zymogen; 1.60A {Lecanicillium psalliotae} SCOP: c.41.1.1 PDB: 3f7o_A
Probab=100.00 E-value=2.5e-44 Score=381.49 Aligned_cols=230 Identities=26% Similarity=0.322 Sum_probs=193.9
Q ss_pred ccCCCCCCCCCcEEEEeccccCCCCCCCCCCCCCCCCCCCccceeeccCcCCCCcccCcceeeeEecccccccccCCCCC
Q 003970 126 VTPVQLAYGDDIVVGIFDTGVWPESESFQEEPSMSPIPSSWKGTCVRGEKFDPQKACNRKLIGARYYVKGFEEEYGPLNA 205 (782)
Q Consensus 126 ~~~~~~~~G~gV~VgVIDtGId~~Hp~f~d~~~~~~~~~~~~g~~~~g~~f~~~~~~n~kiig~~~~~~~~~~~~~~~~~ 205 (782)
.+|... +|+||+|+|||||||++||+|.+. +...+.|..
T Consensus 24 ~~~~~~-~G~gv~VaViDtGvd~~h~~l~~~-----------------------------~~~~~~~~~----------- 62 (279)
T 3f7m_A 24 YAYDTS-AGAGACVYVIDTGVEDTHPDFEGR-----------------------------AKQIKSYAS----------- 62 (279)
T ss_dssp EEECTT-TTTTEEEEEEESCCCTTCGGGTTC-----------------------------EEEEEECSS-----------
T ss_pred eeecCC-CCCCCEEEEEcCCCCCCChhhccc-----------------------------cccccCCCC-----------
Confidence 466665 999999999999999999999643 222222221
Q ss_pred CCCCCCCCCCCCCCCchhhhhhhccccccCCcccccCCcceeeecCCCeEEEEEeeeCCCCCCCCCHHHHHHHHHHHhhc
Q 003970 206 STNREYRSARDFLGHGTHTASTAAGSIAKNAGFFGLGRGIARGGAPRARLAVYKICWGKDSDGKCTEADILAAFDDALHD 285 (782)
Q Consensus 206 ~~~~~~~~~~D~~gHGTHVAgiaag~~~~~~~~~G~~~g~~~GVAP~A~l~~~kv~~~~~~~~~~~~~~i~~ai~~a~~~ 285 (782)
...|..||||||||||+|+. .||||+|+|+.+|+++..+ .+..+++++||+|++++
T Consensus 63 -------~~~d~~gHGT~vAgii~~~~--------------~GvAp~a~l~~~~v~~~~~---~~~~~~~~~ai~~~~~~ 118 (279)
T 3f7m_A 63 -------TARDGHGHGTHCAGTIGSKT--------------WGVAKKVSIFGVKVLDDSG---SGSLSNIIAGMDFVASD 118 (279)
T ss_dssp -------SSSCSSSHHHHHHHHHHCTT--------------TCSSTTCEEEEEECSCTTS---CCCHHHHHHHHHHHHHH
T ss_pred -------CCCCCCCcHHHHHHHHhcCc--------------cccCCCCEEEEEEeeCCCC---CcCHHHHHHHHHHHHhc
Confidence 22378999999999999863 6999999999999998776 58899999999999998
Q ss_pred C-------CcEEEecccCCCCCCCCccChHHHHHHhhhccCceEEEecCCCCCCCCCc-ccCCCceEEecccccCcccce
Q 003970 286 G-------VDVISASFGESPPLRPFFASNADIGSFNAMQHGVTVVFSGGNDGPEPSLV-QNVAPWSICVAASSIDRTFPT 357 (782)
Q Consensus 286 g-------vdVIn~SlG~~~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~G~~~~~~-~~~ap~vitVgAs~~d~~~~~ 357 (782)
+ ++|||||||.. ....+..++.++.++|++||+||||+|...... +...+++|+|||++.
T Consensus 119 ~~~~~~~~~~Vin~S~g~~------~~~~~~~a~~~a~~~gv~vV~AAGN~g~~~~~~~Pa~~~~vi~Vga~~~------ 186 (279)
T 3f7m_A 119 RQSRNCPRRTVASMSLGGG------YSAALNQAAARLQSSGVFVAVAAGNDNRDAANTSPASEPTVCTVGATDS------ 186 (279)
T ss_dssp GGGSCCTTEEEEEECCCEE------CCHHHHHHHHHHHHTTCEEEEECCSSSSBGGGEETTTCTTSEEEEEECT------
T ss_pred cccccCCCCeEEEeCCCcC------ccHHHHHHHHHHHHCCCEEEEEcCCCCCCCCCcCCCCCCCEEEEeecCC------
Confidence 6 89999999976 345677888889999999999999999764433 455789999998542
Q ss_pred eEEeCCccEEEeeeeecccceeeEEEccccccCCccccCCCCCCCCCceEEEEeeCCCCccHHHHHHHHHHcCceEEEEe
Q 003970 358 EIVVNSDFSIVGESFISTEVKAKLVEAFTYFADGICKCENWMGRKATGRVVLCFSTMGSVKTEEAEAAAKKANASGLIFA 437 (782)
Q Consensus 358 ~~~~~~~~~~~g~~~~~~~~~~~lv~~~~~~~~~~c~~~~~~~~~~~gkiv~~~~g~~~~~~~~k~~~~~~~Ga~g~i~~ 437 (782)
T Consensus 187 -------------------------------------------------------------------------------- 186 (279)
T 3f7m_A 187 -------------------------------------------------------------------------------- 186 (279)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cCCCccccccccccEEEEehhhHHHHHHHHhcCCCCcEEEEccCccccCCCCCCccccccCCCCCCCCCCCcccceeecC
Q 003970 438 EPMTELIAEVDIIPTVRIDIAQGTQLRDYLAQFPRLPIVQLKPSKTSIGKVPAPTVAYFSSRGPSSISPDILKPDITAPG 517 (782)
Q Consensus 438 n~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSS~Gp~~~~~~~~KPDI~APG 517 (782)
.+.++.||++||. |||+|||
T Consensus 187 ----------------------------------------------------~~~~~~~S~~g~~--------~di~ApG 206 (279)
T 3f7m_A 187 ----------------------------------------------------NDVRSTFSNYGRV--------VDIFAPG 206 (279)
T ss_dssp ----------------------------------------------------TSBBCTTCCBSTT--------CCEEEEC
T ss_pred ----------------------------------------------------CCCCCCCCCCCCC--------CeEEECC
Confidence 3457899999996 5999999
Q ss_pred ceEEeecCCCCCCCCCCCCCCccceeeeccccchhhHHHHHHHHHHHhCCCCCHHHHHHHHHhccccCC
Q 003970 518 IGVLAAWPPNTPPTLLPSDGRSVKWNFQSGTSMSCPHVSGVVALIKSAHPNWSPAAIRSALMTTAYTRD 586 (782)
Q Consensus 518 ~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~P~lsp~~Ik~~L~~TA~~~~ 586 (782)
++|+++++.+ .|..++|||||||||||++|||+|++|+ ++++||++|++||.+..
T Consensus 207 ~~i~s~~~~~-------------~~~~~sGTS~AaP~vaG~aAll~~~~p~-t~~~v~~~L~~tA~~~~ 261 (279)
T 3f7m_A 207 TSITSTWIGG-------------RTNTISGTSMATPHIAGLAAYLFGLEGG-SAGAMCGRIQTLSTKNV 261 (279)
T ss_dssp SSEEEECGGG-------------CEEEECSHHHHHHHHHHHHHHHHHHTCC-CTTTHHHHHHHHSEESC
T ss_pred CCeEeecCCC-------------CEEEeeEHHHHHHHHHHHHHHHHHhCCC-CHHHHHHHHHHhccccc
Confidence 9999999875 7899999999999999999999999999 99999999999998743
No 34
>3hjr_A Extracellular serine protease; kexin, hydrolase; 1.65A {Aeromonas sobria}
Probab=100.00 E-value=7.5e-43 Score=409.38 Aligned_cols=301 Identities=21% Similarity=0.182 Sum_probs=202.4
Q ss_pred CCCCccCCCCCCCCCcEEEEeccccCCCCCCCCCCCCCCCCCCCccceeeccCcCCCCcccCcceeeeEecccccccccC
Q 003970 122 NTGEVTPVQLAYGDDIVVGIFDTGVWPESESFQEEPSMSPIPSSWKGTCVRGEKFDPQKACNRKLIGARYYVKGFEEEYG 201 (782)
Q Consensus 122 ~~~~~~~~~~~~G~gV~VgVIDtGId~~Hp~f~d~~~~~~~~~~~~g~~~~g~~f~~~~~~n~kiig~~~~~~~~~~~~~ 201 (782)
+++..+|..+++|+||+|||||||||++||||.++- . .+.++|..+..
T Consensus 57 inv~~aw~~g~tG~GV~VaViDtGid~~HpDL~~n~--~--------------------------~~~~~~~~~~~---- 104 (600)
T 3hjr_A 57 LNLWWAHRTGVLGQGVNVAVVDDGLAIAHPDLADNV--R--------------------------PGSKNVVTGSD---- 104 (600)
T ss_dssp CCCHHHHHHTCSCTTCEEEEESSCCCTTCTTTGGGB--C--------------------------SCCBCTTTSSS----
T ss_pred cCHHHHHHcCCCCCCeEEEEEcCCCCCCChhHhhcc--c--------------------------cCcceeecCCC----
Confidence 467889999999999999999999999999997531 0 01112221110
Q ss_pred CCCCCCCCCCCCCCCCCCCchhhhhhhccccccCCcccccCCcceeeecCCCeEEEEEeeeCCCCCCCCCHHHHHHHH-H
Q 003970 202 PLNASTNREYRSARDFLGHGTHTASTAAGSIAKNAGFFGLGRGIARGGAPRARLAVYKICWGKDSDGKCTEADILAAF-D 280 (782)
Q Consensus 202 ~~~~~~~~~~~~~~D~~gHGTHVAgiaag~~~~~~~~~G~~~g~~~GVAP~A~l~~~kv~~~~~~~~~~~~~~i~~ai-~ 280 (782)
+..+..|.+||||||||||||.. ++. .+.||||+|+|+.+|++++.+ .+..++++.|+ +
T Consensus 105 --------dp~p~~~~~gHGThVAGiIAa~~-n~~--------g~~GVAp~A~l~~~rvl~~~~---~~~~~~~~~a~~~ 164 (600)
T 3hjr_A 105 --------DPTPTDPDTAHGTSVSGIIAAVD-NAI--------GTKGIAPRAQLQGFNLLDDNS---QQLQKDWLYALGD 164 (600)
T ss_dssp --------CCCCCSTTCCHHHHHHHHHHCCS-SSS--------SCCCSSTTCEEEEECTTSTTC---CCCHHHHHHHTTS
T ss_pred --------CCCCCCCCCChHHHHHHHHhEeC-CCC--------CcEEeCCCCEEEEEEeecCCC---CccHHHHHHHhhh
Confidence 11223457899999999999863 211 248999999999999998776 46777777776 6
Q ss_pred HHhhcCCcEEEecccCCCCCCCCccCh----HHHHHHh--hhccCceEEEecCCCCCCCCC-------------------
Q 003970 281 DALHDGVDVISASFGESPPLRPFFASN----ADIGSFN--AMQHGVTVVFSGGNDGPEPSL------------------- 335 (782)
Q Consensus 281 ~a~~~gvdVIn~SlG~~~~~~~~~~~~----~~~a~~~--a~~~Gi~vV~AAGN~G~~~~~------------------- 335 (782)
++..++++|||+|||............ +..++.. ...+|+++|+||||.+.....
T Consensus 165 ~~~~~~~~I~n~S~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~AaGNg~~~~~~~~~~~~~~g~~~~~~~~~~ 244 (600)
T 3hjr_A 165 SNASRDNRVFNQSYGMSVVDPRSANSLDQSQLDRLFEQQTLKAQGAAYIKAAGNGFNKIAAGGYVLNRTGNGPKLPFENS 244 (600)
T ss_dssp SHHHHTCSEEEECCCCCCSSCCCSCSHHHHHHHHHHHHHHHSTTCCEEEEECCSCSSEEEETTEEEEEESSCCCCCSSBT
T ss_pred hhhhcCCCEEecccCccccCCccCCcchhhhHHHHHHHhhhccCCcEEEEeccCccccccccccccccCCCCCCCCcccc
Confidence 778889999999999763211111111 1112211 236899999999997632100
Q ss_pred ---cccCCCceEEecccccCcccceeEEeCCccEEEeeeeecccceeeEEEccccccCCccccCCCCCCCCCceEEEEee
Q 003970 336 ---VQNVAPWSICVAASSIDRTFPTEIVVNSDFSIVGESFISTEVKAKLVEAFTYFADGICKCENWMGRKATGRVVLCFS 412 (782)
Q Consensus 336 ---~~~~ap~vitVgAs~~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~lv~~~~~~~~~~c~~~~~~~~~~~gkiv~~~~ 412 (782)
.....+++|+|||+
T Consensus 245 ~~d~~~~~~~~IsVgA~--------------------------------------------------------------- 261 (600)
T 3hjr_A 245 NLDPSNSNFWNLVVSAL--------------------------------------------------------------- 261 (600)
T ss_dssp TSSGGGGSSSEEEEEEE---------------------------------------------------------------
T ss_pred cccCccccCcceEEeee---------------------------------------------------------------
Confidence 00012233333332
Q ss_pred CCCCccHHHHHHHHHHcCceEEEEecCCCccccccccccEEEEehhhHHHHHHHHhcCCCCcEEEEccCccccCCCCCCc
Q 003970 413 TMGSVKTEEAEAAAKKANASGLIFAEPMTELIAEVDIIPTVRIDIAQGTQLRDYLAQFPRLPIVQLKPSKTSIGKVPAPT 492 (782)
Q Consensus 413 g~~~~~~~~k~~~~~~~Ga~g~i~~n~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 492 (782)
...+.
T Consensus 262 ---------------------------------------------------------------------------~~~g~ 266 (600)
T 3hjr_A 262 ---------------------------------------------------------------------------NADGV 266 (600)
T ss_dssp ---------------------------------------------------------------------------CTTSS
T ss_pred ---------------------------------------------------------------------------cCCCC
Confidence 12456
Q ss_pred cccccCCCCCCCCCCCcccceeecCce--------EEeecCCCCCCC-------------CCCCCCCccceeeeccccch
Q 003970 493 VAYFSSRGPSSISPDILKPDITAPGIG--------VLAAWPPNTPPT-------------LLPSDGRSVKWNFQSGTSMS 551 (782)
Q Consensus 493 ~a~fSS~Gp~~~~~~~~KPDI~APG~~--------I~sa~~~~~~~~-------------~~~~~~~~~~y~~~sGTSmA 551 (782)
++.||++|+.. +++|||.+ +....++..... ..........|..++|||||
T Consensus 267 ~a~yS~~G~~v--------~~~apg~~~~~~~~~~vt~~~pG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sGTSmA 338 (600)
T 3hjr_A 267 RSSYSSVGSNI--------FLSATGGEYGTDTPAMVTTDLPGCDMGYNRTDDPSTNRLHGNSQLDASCDYNGVMNGTSSA 338 (600)
T ss_dssp BCTTCCBCTTC--------CEEEECCSCSSSSCCEEEECCSSTTSSSSSTTSCCSSTTTTCTTTCTTCCEEEEECSHHHH
T ss_pred EeecccCCcce--------eeccCCCCCCCCCcceeeecCCCccccccccCCccccccccccccCCCCCceecccccccc
Confidence 78999999985 88999875 222222211000 00112233468899999999
Q ss_pred hhHHHHHHHHHHHhCCCCCHHHHHHHHHhccccCCCCCCccc--------------------cCCCCCcCCCCCcccccc
Q 003970 552 CPHVSGVVALIKSAHPNWSPAAIRSALMTTAYTRDTSHDSIL--------------------AGGSMKVSDPFDIGAGHI 611 (782)
Q Consensus 552 aP~VAG~aALl~q~~P~lsp~~Ik~~L~~TA~~~~~~g~~~~--------------------~~~~~~~~~~~~~G~G~v 611 (782)
||||||++|||+|+||+|+++|||++|++||++++....|+. ....+. .....||||+|
T Consensus 339 aP~VAGvaALll~a~P~lt~~~v~~~L~~TA~~~d~~~~p~~~~~~~~~~~~~~~~~~~~w~~N~aG~-~~s~~yGfG~v 417 (600)
T 3hjr_A 339 TPSTSGAMALLMSAYPDLSVRDLRDLLARSATRVDAKHQPVMVSYTSSTGKVRDVKGLEGWERNAAGM-WFSPTYGFGLI 417 (600)
T ss_dssp HHHHHHHHHHHHHHSTTSCHHHHHHHHHHHCBCCSTTCCCEEEEEECTTSCEEEEEEECCSEECTTSC-EEBTTTBTCBC
T ss_pred chhHHHHHHHHHHHCCCCCHHHHHHHHHhhCccCCCCCCcccccccccccccccccccCCcccccCCc-eEccccCCcee
Confidence 999999999999999999999999999999999887655421 111111 12457999999
Q ss_pred CccccCCCce
Q 003970 612 NPMKAMDPGL 621 (782)
Q Consensus 612 n~~~Al~~gl 621 (782)
|+.+|++...
T Consensus 418 DA~~aV~~A~ 427 (600)
T 3hjr_A 418 DVNKALELAA 427 (600)
T ss_dssp CHHHHHHHHT
T ss_pred cHHHHHHHhh
Confidence 9999987443
No 35
>1t1e_A Kumamolisin; proenzyme, prosubtilase, activation mechanism, sedolisin, serine-carboxyl proteinase, hydrolase; 1.18A {Bacillus SP} SCOP: c.41.1.2 d.58.3.2 PDB: 1t1g_A 1t1i_A 1gt9_1 1gtg_1 1gtj_1* 1gtl_1* 1sio_A* 1sn7_A 1zvj_A 1siu_A 1zvk_A
Probab=99.89 E-value=2.1e-24 Score=247.27 Aligned_cols=97 Identities=25% Similarity=0.398 Sum_probs=75.7
Q ss_pred ceeeecCCCeEEEEEeeeCCCCCCCCCHHHHHHHHHHHhh---cCCcEEEecccCCCCCCCC---ccChHHHHHHhhhcc
Q 003970 245 IARGGAPRARLAVYKICWGKDSDGKCTEADILAAFDDALH---DGVDVISASFGESPPLRPF---FASNADIGSFNAMQH 318 (782)
Q Consensus 245 ~~~GVAP~A~l~~~kv~~~~~~~~~~~~~~i~~ai~~a~~---~gvdVIn~SlG~~~~~~~~---~~~~~~~a~~~a~~~ 318 (782)
.+.||||+|+|+.|++. ...++++++|+||++ ++++|||+|||... ..+ +...+..++.+|..+
T Consensus 273 ~~~gvAp~a~i~~~~~~--------~~~~~~~~ai~~av~~~~~~~~VIS~S~G~~e--~~~~~~~~~~~~~~~~~a~~~ 342 (552)
T 1t1e_A 273 VAGALAPGAKIAVYFAP--------NTDAGFLNAITTAVHDPTHKPSIVSISWGGPE--DSWAPASIAAMNRAFLDAAAL 342 (552)
T ss_dssp HHHHHCTTSEEEEEECC--------SSHHHHHHHHHHHHTCTTTCCSEEEECEEEEG--GGSCHHHHHHHHHHHHHHHHT
T ss_pred hhhccCCCCeEEEEEcC--------CCCchHHHHHHHHHhcccCCCCEEEecccCCc--ccCCHHHHHHHHHHHHHHHhC
Confidence 46899999999999972 346789999999998 79999999999873 111 123455666778899
Q ss_pred CceEEEecCCCCCCCC--------CcccCCCceEEeccccc
Q 003970 319 GVTVVFSGGNDGPEPS--------LVQNVAPWSICVAASSI 351 (782)
Q Consensus 319 Gi~vV~AAGN~G~~~~--------~~~~~ap~vitVgAs~~ 351 (782)
||+||+||||+|.... ..+...|+|++||+++.
T Consensus 343 Gi~vv~AsGd~G~~~~~~~~~~~~~~PAs~P~V~aVGat~~ 383 (552)
T 1t1e_A 343 GVTVLAAAGDSGSTDGEQDGLYHVDFPAASPYVLACGGTRL 383 (552)
T ss_dssp TCEEEEECCSBGGGTTCCSSSCCCEETTTSTTSEEEEEEEE
T ss_pred CeEEEEecCCCCCCCCCCCCcccccCcccCCCEEEEecccc
Confidence 9999999999996532 23345799999999764
No 36
>1ga6_A Serine-carboxyl proteinase; serine-carboxyl proteinase, hydrolase-hydrolase inhibitor CO; 1.00A {Pseudomonas SP} SCOP: c.41.1.2 PDB: 1ga4_A* 1ga1_A 1kdv_A* 1kdy_A* 1kdz_A* 1ke1_A* 1ke2_A* 1nlu_A*
Probab=99.83 E-value=8e-21 Score=207.39 Aligned_cols=101 Identities=17% Similarity=0.164 Sum_probs=77.5
Q ss_pred eeecCCCeEEEEEeeeCCCCCCCCCHHHHHHHHHHHhh-cCCcEEEecccCCCC--CCCCccChHHHHHHhhhccCceEE
Q 003970 247 RGGAPRARLAVYKICWGKDSDGKCTEADILAAFDDALH-DGVDVISASFGESPP--LRPFFASNADIGSFNAMQHGVTVV 323 (782)
Q Consensus 247 ~GVAP~A~l~~~kv~~~~~~~~~~~~~~i~~ai~~a~~-~gvdVIn~SlG~~~~--~~~~~~~~~~~a~~~a~~~Gi~vV 323 (782)
..+||+++++.|++.+... +..++++++|+||++ ++++|||+|||.... ....+...+..++.+|..+||+||
T Consensus 90 g~~aP~a~~~~~~~~~~~~----~~~~~~~~ai~~av~~~~~~ViS~S~G~~e~~~~~~~~~~~~~~~~~~a~~~Gitvv 165 (372)
T 1ga6_A 90 GSAGGAVQQLLFYMADQSA----SGNTGLTQAFNQAVSDNVAKVINVSLGWCEADANADGTLQAEDRIFATAAAQGQTFS 165 (372)
T ss_dssp HHTTSCEEEEEEEEECTTS----STTHHHHHHHHHHHHHCCCSEEEECCCEEHHHHHHTTHHHHHHHHHHHHHHTTCEEE
T ss_pred hhcCCCCcEEEEEeCCCCC----cccHHHHHHHHHHHhcCCCCEEEeCCCCCCCCCchHHHHHHHHHHHHHHHhCCcEEE
Confidence 4578999999999986543 678899999999998 899999999998630 001122345666777889999999
Q ss_pred EecCCCCCCCC-------------CcccCCCceEEeccccc
Q 003970 324 FSGGNDGPEPS-------------LVQNVAPWSICVAASSI 351 (782)
Q Consensus 324 ~AAGN~G~~~~-------------~~~~~ap~vitVgAs~~ 351 (782)
+||||+|...+ ..+...|+|++||+++.
T Consensus 166 ~AsGd~G~~~~~~~g~~~~~~~~~~~PAs~P~V~aVGat~~ 206 (372)
T 1ga6_A 166 VSSGDEGVYECNNRGYPDGSTYSVSWPASSPNVIAVGGTTL 206 (372)
T ss_dssp EECCSBTTBTTTTTTCCCTTCCBCEETTTCTTSEEEEEEEE
T ss_pred EEECCCCCccccccCccCCccCCcCCCCCCCCeEEEEeeec
Confidence 99999997532 23345799999999764
No 37
>3edy_A Tripeptidyl-peptidase 1; protease, TPP1, sedolisin, batten disease, lincl, zymogen, P exopeptidase, endopeptidase, S53 family, CLN2; HET: NAG; 1.85A {Homo sapiens} PDB: 3ee6_A*
Probab=99.00 E-value=6.2e-10 Score=126.57 Aligned_cols=101 Identities=16% Similarity=0.188 Sum_probs=61.7
Q ss_pred eeeecCCCeEEEEEeeeCCCCCCCCCHHHHHHHHHHHh--hcCCcEEEecccCCCC-CCCCccChHHHHHHhhhccCceE
Q 003970 246 ARGGAPRARLAVYKICWGKDSDGKCTEADILAAFDDAL--HDGVDVISASFGESPP-LRPFFASNADIGSFNAMQHGVTV 322 (782)
Q Consensus 246 ~~GVAP~A~l~~~kv~~~~~~~~~~~~~~i~~ai~~a~--~~gvdVIn~SlG~~~~-~~~~~~~~~~~a~~~a~~~Gi~v 322 (782)
+.++++...++.|...+. ....+.+++.+++.. .+-++|||+|||.... ....+...+...+.++..+||.|
T Consensus 261 a~a~~~~i~~~~~~~~g~-----~~~~e~~l~~l~~l~~~~~~~~ViS~S~G~~e~~~~~~y~~~~~~~~~~~~~~Gitv 335 (544)
T 3edy_A 261 LMSAGANISTWVYSSPGR-----HEGQEPFLQWLMLLSNESALPHVHTVSYGDDEDSLSSAYIQRVNTELMKAAARGLTL 335 (544)
T ss_dssp HHHHSTTSEEEEECCCSC-----CTTCCHHHHHHHHHTTCSSCCSEEEEECCEEGGGSCHHHHHHHHHHHHHHHHTTCEE
T ss_pred HhccCCCceEEEEecCCc-----ccccccHHHHHHHHhccCCCCcEEEecCCCcccccCHHHHHHHHHHHHHHHhCCeEE
Confidence 345555666655543211 112234555454443 3467899999998831 00011123445556778999999
Q ss_pred EEecCCCCCCCC----------CcccCCCceEEeccccc
Q 003970 323 VFSGGNDGPEPS----------LVQNVAPWSICVAASSI 351 (782)
Q Consensus 323 V~AAGN~G~~~~----------~~~~~ap~vitVgAs~~ 351 (782)
++|+||+|.... ..+...|||++||+++.
T Consensus 336 ~~ASGD~G~~~~~~~~~~~~~~~~Pas~P~VtaVGgT~l 374 (544)
T 3edy_A 336 LFASGDSGAGCWSVSGRHQFRPTFPASSPYVTTVGGTSF 374 (544)
T ss_dssp EEECCSSTTBCEEETTEEECCCEETTTCTTSEEEEEEEE
T ss_pred EEecCCCCccccCCCCCccccCCCcCCCCcEEEEeeeec
Confidence 999999997532 23445799999999864
No 38
>2w2n_P Proprotein convertase subtilisin/kexin type 9; hydrolase-receptor complex, PCSK9, proprotein converta low-density lipoprotein receptor, EGF; 2.30A {Homo sapiens} PDB: 2w2m_P 2w2o_P 2w2p_P 2w2q_P 2xtj_P
Probab=98.92 E-value=1.3e-09 Score=98.00 Aligned_cols=78 Identities=18% Similarity=0.141 Sum_probs=64.1
Q ss_pred CCceEEEEeCCCCCCCCchhhHHHHHHHHHHhCCchhhccceEEEeeeeeeeEEEEeCHHHHHHHhcCcCeEEEEeccee
Q 003970 26 ASHVYIVYLGHNRHCDPNLISKSHLQLLSSVFASEEDAKRSLLYGYKYSFSGFSAKLNSSQAASLAEMEEVISIFESQVL 105 (782)
Q Consensus 26 ~~~~yIV~l~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~i~~~y~~~~ng~s~~l~~~~~~~L~~~p~V~~V~~~~~~ 105 (782)
.++.|||+|++... ......|.+++.+++.+ .....++.|+|++.|+||+++|+++++++|+++|+|.+|++|+.+
T Consensus 36 ip~~YIV~lk~~~~---~~~~~~h~~~l~s~~~~-~~~~~~i~~sY~~~~~GFaa~Lt~~~~~~L~~~P~V~~VE~D~~v 111 (114)
T 2w2n_P 36 LPGTYVVVLKEETH---LSQSERTARRLQAQAAR-RGYLTKILHVFHGLLPGFLVKMSGDLLELALKLPHVDYIEEDSSV 111 (114)
T ss_dssp EEEEEEEEECTTCC---HHHHHHHHHHHHHHHHH-TTCCCEEEEEECSSSSEEEEECCGGGHHHHHTSTTEEEEEEEEEE
T ss_pred CCCcEEEEECCCCC---HHHHHHHHHHHHHHhhh-cccCCceEEEecccceEEEEEcCHHHHHHHHcCCCccEEEeCceE
Confidence 45789999998642 33445788888887654 224567999999999999999999999999999999999999987
Q ss_pred ec
Q 003970 106 KL 107 (782)
Q Consensus 106 ~~ 107 (782)
+.
T Consensus 112 ~~ 113 (114)
T 2w2n_P 112 FA 113 (114)
T ss_dssp EE
T ss_pred ec
Confidence 64
No 39
>3cnq_P Subtilisin BPN'; uncleaved, proenzyme, substrate complex, hydrolase, metal- binding, protease, secreted, serine protease, sporulation; 1.71A {Bacillus amyloliquefaciens} PDB: 3bgo_P 3co0_P 1spb_P 1scj_B
Probab=98.76 E-value=2.4e-08 Score=83.93 Aligned_cols=74 Identities=19% Similarity=0.223 Sum_probs=56.1
Q ss_pred CCCceEEEEeCCCCCCCCchhhHHHHHHHHHHhCCchhhccceEEEeeeeeeeEEEEeCHHHHHHHhcCcCeEEEEecce
Q 003970 25 TASHVYIVYLGHNRHCDPNLISKSHLQLLSSVFASEEDAKRSLLYGYKYSFSGFSAKLNSSQAASLAEMEEVISIFESQV 104 (782)
Q Consensus 25 ~~~~~yIV~l~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~i~~~y~~~~ng~s~~l~~~~~~~L~~~p~V~~V~~~~~ 104 (782)
..++.|||+|++... .. ..+.++++. ...++.|+|++ |+||+++++++++++|+++|+|.+|++++.
T Consensus 6 ~i~~~YIV~~k~~~~--~~---~~~~~~~~~-------~g~~i~~~y~~-~~Gfaa~l~~~~~~~L~~~p~V~~Ve~D~~ 72 (80)
T 3cnq_P 6 NGEKKYIVGFKQGFK--SC---AKKEDVISE-------KGGKLQKCFKY-VDAASATLNEKAVEELKKDPSVAYVEEDKL 72 (80)
T ss_dssp --CCEEEEEECTTCC--SH---HHHHHHHHT-------TTCEEEEECSS-SSEEEEECCHHHHHHHHTCTTEEEEEECCE
T ss_pred cCCCCEEEEECCCCC--hH---HHHHHHHHH-------cCCcceEEEcc-cEEEEEEcCHHHHHHHHhCCCccEEEeCcE
Confidence 346899999998642 11 112233322 23468999998 999999999999999999999999999999
Q ss_pred eeccccc
Q 003970 105 LKLHTTR 111 (782)
Q Consensus 105 ~~~~~~~ 111 (782)
++++++.
T Consensus 73 v~~~tt~ 79 (80)
T 3cnq_P 73 YRALSAT 79 (80)
T ss_dssp EEECCC-
T ss_pred EEEeeec
Confidence 9987654
No 40
>3icu_A E3 ubiquitin-protein ligase RNF128; E3 ligase, energy, PA domain, transmembrane,protein turnover conjugation pathway; HET: NAG; 2.10A {Homo sapiens}
Probab=98.58 E-value=3.3e-07 Score=89.37 Aligned_cols=100 Identities=13% Similarity=-0.012 Sum_probs=77.3
Q ss_pred eeEEEccccccCCccccCCCCCCC-------CCceEEEEeeCC-CCccHHHHHHHHHHcCceEEEEecCCC------ccc
Q 003970 379 AKLVEAFTYFADGICKCENWMGRK-------ATGRVVLCFSTM-GSVKTEEAEAAAKKANASGLIFAEPMT------ELI 444 (782)
Q Consensus 379 ~~lv~~~~~~~~~~c~~~~~~~~~-------~~gkiv~~~~g~-~~~~~~~k~~~~~~~Ga~g~i~~n~~~------~~~ 444 (782)
-.++..........|.+....... .+|||+|++||+ |. |.+|+.+++++||.++||||+.. .+.
T Consensus 72 G~lv~~~~~~~~~GC~~~~~~~~~~~~~~~~~~gkIaLV~RG~~Cs--F~~Kv~nAq~aGA~avIIyNn~~~g~~~~~m~ 149 (194)
T 3icu_A 72 GVLVPPDGPGALNACNPHTNFTVPTVWGSTVQVSWLALIQRGGGCT--FADKIHLAYERGASGAVIFNFPGTRNEVIPMS 149 (194)
T ss_dssp EEEECBSSTTCTTCCSTTCCBCCCBCTTSSCBCCEEEEEESCTTCC--HHHHHHHHHHTTCSEEEEECCTTCTTCCCCCC
T ss_pred EEEEecCCCCCcCCCCCCccccCCcccccccCCCeEEEEECCCCcC--HHHHHHHHHHCCCcEEEEEeCCCCCCceeeec
Confidence 455555443456799887653222 578999999999 97 99999999999999999999742 222
Q ss_pred -cccccccEEEEehhhHHHHHHHHhcCCCCcEEEEccC
Q 003970 445 -AEVDIIPTVRIDIAQGTQLRDYLAQFPRLPIVQLKPS 481 (782)
Q Consensus 445 -~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~~i~~~ 481 (782)
.....||+++|+..+|+.|++++. .+...+++|...
T Consensus 150 ~~~~~~IPsv~Is~~~G~~L~~~L~-~G~~Vtvti~vg 186 (194)
T 3icu_A 150 HPGAVDIVAIMIGNLKGTKILQSIQ-RGIQVTMVIEVG 186 (194)
T ss_dssp CTTCCSSEEEEECHHHHHHHHHHHH-TTCCEEEEEEEE
T ss_pred CCCCCceeEEEECHHHHHHHHHHHH-CCCeEEEEEECC
Confidence 233579999999999999999999 777777777554
No 41
>2qtw_A Proprotein convertase subtilisin/kexin type 9 Pro; coronary heart disease, hypercholest low density lipoprotein receptor, autocatalytic cleavage; HET: NAG; 1.90A {Homo sapiens} PDB: 3m0c_A 2pmw_A 3h42_A 3bps_P 3gcw_P 3gcx_P 3p5b_P 3p5c_P
Probab=98.56 E-value=8.8e-08 Score=87.06 Aligned_cols=78 Identities=18% Similarity=0.141 Sum_probs=58.1
Q ss_pred CCceEEEEeCCCCCCCCchhhHHHHHHHHHHhCCchhhccceEEEeeeeeeeEEEEeCHHHHHHHhcCcCeEEEEeccee
Q 003970 26 ASHVYIVYLGHNRHCDPNLISKSHLQLLSSVFASEEDAKRSLLYGYKYSFSGFSAKLNSSQAASLAEMEEVISIFESQVL 105 (782)
Q Consensus 26 ~~~~yIV~l~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~i~~~y~~~~ng~s~~l~~~~~~~L~~~p~V~~V~~~~~~ 105 (782)
.++.|||+||+... ......|.+.+..+.... ....++.|+|++.|+||+++++++++++|+++|+|.+|++++.+
T Consensus 46 Ip~~YIV~~K~~~~---~~~~~~~~~~l~~~~~~r-~~g~~i~~~Y~~~~~GFaa~l~~~~~~~L~~~p~V~~VE~D~~v 121 (124)
T 2qtw_A 46 LPGTYVVVLKEETH---LSQSERTARRLQAQAARR-GYLTKILHVFHGLLPGFLVKMSGDLLELALKLPHVDYIEEDSSV 121 (124)
T ss_dssp EEEEEEEEECTTCC---HHHHHHHHHHHHHHHHHT-TCCCEEEEEECSSSCEEEEECCGGGHHHHHTSTTEEEEEEEEEE
T ss_pred CCCCEEEEECCCCC---HHHHHHHHHHHHHHHhhc-ccCCceEEEecccceEEEEEcCHHHHHHHHcCCCCcEEEeCceE
Confidence 35789999998642 233344445554432110 02346899999999999999999999999999999999999987
Q ss_pred ec
Q 003970 106 KL 107 (782)
Q Consensus 106 ~~ 107 (782)
+.
T Consensus 122 ~a 123 (124)
T 2qtw_A 122 FA 123 (124)
T ss_dssp EE
T ss_pred ec
Confidence 64
No 42
>1v5i_B POIA1, IA-1=serine proteinase inhibitor; protease-inhibitor complex, subtilisin, hydrolase-Pro binding complex; 1.50A {Pleurotus ostreatus} SCOP: d.58.3.2 PDB: 1itp_A
Probab=98.46 E-value=6.9e-07 Score=73.95 Aligned_cols=70 Identities=14% Similarity=0.182 Sum_probs=56.2
Q ss_pred ceEEEEeCCCCCCCCchhhHHHHHHHHHHhCCchhhccceEEEee-eeeeeEEEEeCHHHHHHHhcC--cCeEEEEecce
Q 003970 28 HVYIVYLGHNRHCDPNLISKSHLQLLSSVFASEEDAKRSLLYGYK-YSFSGFSAKLNSSQAASLAEM--EEVISIFESQV 104 (782)
Q Consensus 28 ~~yIV~l~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~i~~~y~-~~~ng~s~~l~~~~~~~L~~~--p~V~~V~~~~~ 104 (782)
+.|||.||+.. +......|.+++...- .++.+.|. ..|+||+++++++++++|+++ |.|.+||+|+.
T Consensus 3 ~sYIV~lk~~~---~~~~~~~~~~~~~~~g-------g~i~~~y~~~~~~Gfa~~~~~~~l~~l~~~~~p~V~~VE~D~~ 72 (76)
T 1v5i_B 3 GKFIVIFKNDV---SEDKIRETKDEVIAEG-------GTITNEYNMPGMKGFAGELTPQSLTKFQGLQGDLIDSIEEDHV 72 (76)
T ss_dssp EEEEEEECTTC---CHHHHHHHHHHHHHHT-------CCCCEEEEETTEEEEEEEECHHHHHHHHHTBTTTEEEEEECCE
T ss_pred ceEEEEECCCC---CHHHHHHHHHHHHhhC-------CceEEEEEcCceeEEEEEcCHHHHHHHHhcCCCCCcEEcCCcE
Confidence 67999999863 2344455666666542 35889994 799999999999999999999 88999999998
Q ss_pred eec
Q 003970 105 LKL 107 (782)
Q Consensus 105 ~~~ 107 (782)
++.
T Consensus 73 v~~ 75 (76)
T 1v5i_B 73 AHA 75 (76)
T ss_dssp EEC
T ss_pred EeC
Confidence 764
No 43
>2z30_B TK-subtilisin; thermococcus kodakaraensis, hydrolase; 1.65A {Thermococcus kodakarensis} PDB: 2z2y_B 3a3p_B 2z56_B 2z58_B 2z57_B 3a3n_B 3a3o_B
Probab=97.09 E-value=0.00078 Score=53.57 Aligned_cols=62 Identities=11% Similarity=0.103 Sum_probs=48.5
Q ss_pred ceEEEEeCCCCCCCCchhhHHHHHHHHHHhCCchhhccceEEEeeeeeeeEEEEeCHHHHHHHhcCcCeEEEEecceee
Q 003970 28 HVYIVYLGHNRHCDPNLISKSHLQLLSSVFASEEDAKRSLLYGYKYSFSGFSAKLNSSQAASLAEMEEVISIFESQVLK 106 (782)
Q Consensus 28 ~~yIV~l~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~i~~~y~~~~ng~s~~l~~~~~~~L~~~p~V~~V~~~~~~~ 106 (782)
-+|||.|++.. .. .++ ......++.++|. .+++++++|+++.+++|+++|+|.+|++|...+
T Consensus 2 ~~~IV~f~~~~-~~--------~~~-------i~~~gG~i~~~~~-~I~a~~~~lp~~~~~~L~~~p~V~yVE~D~~v~ 63 (65)
T 2z30_B 2 IRVIVSVDKAK-FN--------PHE-------VLGIGGHIVYQFK-LIPAVVVDVPANAVGKLKKMPGVEKVEFDHQAV 63 (65)
T ss_dssp EEEEEEECGGG-CC--------GGG-------GGGGTCEEEEECS-SSSEEEEEECGGGHHHHHTSTTEEEEEECCEEE
T ss_pred eeEEEEEcCcc-hh--------HHH-------HHHCCCEEEEEec-CCcEEEEEeCHHHHHHHhcCCCceEEecCcEEE
Confidence 47999998741 10 011 2233457899997 899999999999999999999999999998765
No 44
>2ek8_A Aminopeptidase; metalloproteinase, hydrolase; 1.80A {Aneurinibacillus SP} PDB: 2ek9_A*
Probab=96.54 E-value=0.0085 Score=66.28 Aligned_cols=70 Identities=20% Similarity=0.244 Sum_probs=58.2
Q ss_pred CCCCCCCCceEEEEeeCCCCccHHHHHHHHHHcCceEEEEecCCC-----ccc-cccccccEEEEehhhHHHHHHHHh
Q 003970 397 NWMGRKATGRVVLCFSTMGSVKTEEAEAAAKKANASGLIFAEPMT-----ELI-AEVDIIPTVRIDIAQGTQLRDYLA 468 (782)
Q Consensus 397 ~~~~~~~~gkiv~~~~g~~~~~~~~k~~~~~~~Ga~g~i~~n~~~-----~~~-~~~~~~p~~~i~~~~g~~l~~~~~ 468 (782)
++...+++|||+++.++.|. |.+|..+++++||.|+|++|+.. .+. .....+|.+.++.++++.|++++.
T Consensus 107 D~~~~dv~GkIvlv~~g~~~--~~~k~~~A~~~GA~gvIi~~~~~~~~~g~~~~~~~~~IP~~~Is~~~a~~L~~~l~ 182 (421)
T 2ek8_A 107 DVAGKDLNGKIALIQRGNIS--FADKVRNAAKQGAKAVIIYNNTDGKLNGTLGGSDASFVAAVGITKQEGDALAANLR 182 (421)
T ss_dssp TTTTSCCTTSEEEEECCSSC--HHHHHHHHHHTTCSEEEEECSSSSCCCCBCSSCCTTCCEEEEECHHHHHHHHHHHH
T ss_pred hcCCCCcCceEEEEeCCCCC--HHHHHHHHHHCCCeEEEEEeCCCcccccccCCCCCCCccEEEeCHHHHHHHHHHhh
Confidence 34445899999999999986 99999999999999999999854 111 134679999999999999999984
No 45
>3iib_A Peptidase M28; YP_926796.1, structural genomics, J center for structural genomics, JCSG, protein structure INI PSI-2; HET: PGE; 1.70A {Shewanella amazonensis SB2B}
Probab=95.26 E-value=0.052 Score=60.29 Aligned_cols=96 Identities=17% Similarity=0.124 Sum_probs=64.9
Q ss_pred eeeEEEccccccCCccccCCCCCCCCCceEEEEeeCCCCc-------cHHHH----HHHHHHcCceEEEEecCCC-----
Q 003970 378 KAKLVEAFTYFADGICKCENWMGRKATGRVVLCFSTMGSV-------KTEEA----EAAAKKANASGLIFAEPMT----- 441 (782)
Q Consensus 378 ~~~lv~~~~~~~~~~c~~~~~~~~~~~gkiv~~~~g~~~~-------~~~~k----~~~~~~~Ga~g~i~~n~~~----- 441 (782)
..++|+..+ ...|.. ....+++||||++.++.|.. .+..| ..+++++||+++|++|+..
T Consensus 107 ta~lV~v~~---~~~~~~--~~~~dvkGKIVlv~~~~~~~~~~~~y~~~~~kr~~~a~~A~~aGA~avIi~~~~~~~~~~ 181 (444)
T 3iib_A 107 SATIVRFDT---LQDLQN--AEAGSLNDKIAFIDAKTERHRDGKGYGQTASGRSRGAVAAAEKGAVGIIIRSIGTDHDRM 181 (444)
T ss_dssp EEEEEEESS---HHHHHT--SCTTTTTTCEEEECCCCCCCTTCHHHHHHHHHHHHHHHHHHHTTCSEEEEECSCSCCSSC
T ss_pred EEEEEecCC---HHHHhh--ccccccCccEEEEeCCCCCCcccccccchhhhhhhHHHHHHHCCCeEEEEEccCCccccc
Confidence 367776542 112322 23568999999999988741 13333 4679999999999998643
Q ss_pred ----cc--ccccccccEEEEehhhHHHHHHHHhcCCCCcEEEEc
Q 003970 442 ----EL--IAEVDIIPTVRIDIAQGTQLRDYLAQFPRLPIVQLK 479 (782)
Q Consensus 442 ----~~--~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~~i~ 479 (782)
.+ ......+|++.|+.++++.|...+. .+....+++.
T Consensus 182 ~~tg~~~~~~~~~~IP~~~Is~~da~~L~~~l~-~g~~~~v~l~ 224 (444)
T 3iib_A 182 AHTGMMRYEEGVTAIPAAAISNPDADLINAMLK-RDKEVVISLE 224 (444)
T ss_dssp CCCCBCCCCTTSCCCCEEEECHHHHHHHHHHHT-TTCCCEEEEE
T ss_pred ccCCccccCCCCCCCCeEEecHHHHHHHHHHHh-CCCCeEEEEE
Confidence 01 1123579999999999999999987 5444444443
No 46
>3kas_A Transferrin receptor protein 1; transferrin receptor 1, arenavirus, cell MEMB disulfide bond, endocytosis, HOST-virus inter receptor, secreted, transmembrane; HET: NAG FUC BMA MAN; 2.40A {Homo sapiens} PDB: 1de4_C* 3s9l_A* 3s9m_A* 3s9n_A* 1cx8_A* 1suv_A 2nsu_A
Probab=94.35 E-value=0.053 Score=62.73 Aligned_cols=66 Identities=21% Similarity=0.227 Sum_probs=53.5
Q ss_pred CCCCceEEEEeeCCCCccHHHHHHHHHHcCceEEEEecCCCc--c--------------cc-------------------
Q 003970 401 RKATGRVVLCFSTMGSVKTEEAEAAAKKANASGLIFAEPMTE--L--------------IA------------------- 445 (782)
Q Consensus 401 ~~~~gkiv~~~~g~~~~~~~~k~~~~~~~Ga~g~i~~n~~~~--~--------------~~------------------- 445 (782)
.+++|||+|+.+|.|. +.+|..+++++||.|+|++++... . ..
T Consensus 128 vdv~GkIvlv~~g~~~--~~~K~~~A~~~GA~gvii~~~~~~~~~~~~~~~~~G~~~~~~Gdp~tpg~ps~~~~~~~~~~ 205 (640)
T 3kas_A 128 TPVNGSIVIVRAGKIT--FAEKVANAESLNAIGVLIYMDQTKFPIVNAELSFFGHAHLGTGDPYTPGFPSFNHTQFPPSR 205 (640)
T ss_dssp SCCTTSEEEEESCSSC--HHHHHHHHHTTTCSEEEEECCTTTCCCSCTTCCCCEECCSSSSCSCCCSSCC---CCCCCCS
T ss_pred cccCCcEEEEecCCCC--HHHHHHHHHHCCCeEEEEEeccccccccccccccccccccCCCCCCCCCccccccccccccc
Confidence 4799999999999886 999999999999999999997531 0 00
Q ss_pred --ccccccEEEEehhhHHHHHHHHh
Q 003970 446 --EVDIIPTVRIDIAQGTQLRDYLA 468 (782)
Q Consensus 446 --~~~~~p~~~i~~~~g~~l~~~~~ 468 (782)
....||++.|+.+++..|+..+.
T Consensus 206 ~~~~p~IP~~~Is~~~a~~Ll~~l~ 230 (640)
T 3kas_A 206 SSGLPNIPVQTISRAAAEKLFGNME 230 (640)
T ss_dssp SCCCCSSCEEECCHHHHHHHHTTEE
T ss_pred ccCCCCCCEEecCHHHHHHHHHHcc
Confidence 01368999999999999987554
No 47
>3fed_A Glutamate carboxypeptidase III; metallopeptidase, bimetallic active site, N-glycosylation, C cation, chloride anion, zinc IONS, dipept glycoprotein; HET: NAG BIX; 1.29A {Homo sapiens} PDB: 3fec_A* 3fee_A* 3ff3_A* 2c6c_A* 2c6g_A* 2c6p_A* 2cij_A* 2jbj_A* 2jbk_A* 3rbu_A* 3bi1_A* 2oot_A* 2pvv_A* 2pvw_A* 2xei_A* 2or4_A* 3bi0_A* 3bhx_A* 3d7d_A* 3d7f_A* ...
Probab=94.35 E-value=0.048 Score=63.81 Aligned_cols=67 Identities=22% Similarity=0.262 Sum_probs=54.8
Q ss_pred CCCCCceEEEEeeCCCCccHHHHHHHHHHcCceEEEEecCCC------------------------cc-----ccc----
Q 003970 400 GRKATGRVVLCFSTMGSVKTEEAEAAAKKANASGLIFAEPMT------------------------EL-----IAE---- 446 (782)
Q Consensus 400 ~~~~~gkiv~~~~g~~~~~~~~k~~~~~~~Ga~g~i~~n~~~------------------------~~-----~~~---- 446 (782)
..+++|||+|+++|.|. |.+|..+|+++||.|+||||+.. .+ ..+
T Consensus 150 ~~~v~GkIvlv~~G~~~--~~~Kv~~A~~~GA~gviiy~dp~d~~~~g~~~yP~~~~~p~~~vqrGsv~~~~~~GDp~TP 227 (707)
T 3fed_A 150 GINCTGKIVIARYGKIF--RGNKVKNAMLAGAIGIILYSDPADYFAPEVQPYPKGWNLPGTAAQRGNVLNLNGAGDPLTP 227 (707)
T ss_dssp CCCCTTCEEEEECCSSC--HHHHHHHHHHTTCSEEEEECCHHHHCCTTCCBTTTSSBCCTTCCCCCCCCCCTTCCSTTCT
T ss_pred CCCCCCeEEEEECCCCC--HhHHHHHHHHCCCEEEEEEcCchhccccccccCCCCccCCCccccccceecccCCCCCCCC
Confidence 45799999999999975 99999999999999999998621 00 011
Q ss_pred ------------------cccccEEEEehhhHHHHHHHHh
Q 003970 447 ------------------VDIIPTVRIDIAQGTQLRDYLA 468 (782)
Q Consensus 447 ------------------~~~~p~~~i~~~~g~~l~~~~~ 468 (782)
...||++.|+..++..|+..+.
T Consensus 228 G~ps~~~~~r~~~~~~~~~p~IP~~pIS~~da~~Ll~~l~ 267 (707)
T 3fed_A 228 GYPAKEYTFRLDVEEGVGIPRIPVHPIGYNDAEILLRYLG 267 (707)
T ss_dssp TSCCCTTCCCCCGGGCTTCCSSCEEEECHHHHHHHHHTBC
T ss_pred CCcccCCCcccChhhccCCCCCCeEecCHHHHHHHHHHhc
Confidence 2468999999999999998765
No 48
>2ys4_A Hydrocephalus-inducing protein homolog; hydin, PAPD-like, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=93.69 E-value=0.34 Score=43.25 Aligned_cols=73 Identities=21% Similarity=0.266 Sum_probs=51.6
Q ss_pred ceEEEEEEEEecCCCCCeEEEEEEeCCCccEEEEEcceeEeccCCeEEEEEEEEEecccCCCceEEEEEEEE-cCceEEE
Q 003970 683 STMTIKRTVKNVGQKKNAIYFASVVKPGGVEVVVWPRVLVFSWFKEEVSYYVSLKPLKMSQGRFDFGQIVWS-DGFHYVR 761 (782)
Q Consensus 683 ~~~~~~rtvtnv~~~~~~ty~~~~~~p~g~~v~v~p~~~~~~~~g~~~~~~v~~~~~~~~~~~~~~G~~~~~-~~~~~v~ 761 (782)
.+.+.+.+|+|+|.. +..|+.....| .+++|....+ .+||+..++|+|.+.. . +.+.+.|.+. ++...+.
T Consensus 41 ~~~~~~~~l~N~g~~-~~~f~~~~~~~----F~i~P~~g~L-~pg~~~~i~V~F~P~~--~-g~~~~~l~v~~~~g~~~~ 111 (122)
T 2ys4_A 41 YSTQKILLVRNIGNK-NAVFHIKTCRP----FSIEPAIGTL-NVGESMQLEVEFEPQS--V-GDHSGRLIVCYDTGEKVF 111 (122)
T ss_dssp SCEEEEEEEECCSSS-CEEEEEECCTT----EEEESSEEEE-CTTCEEEEEEEECCSS--S-BCCCCBCEEEESSSCEEC
T ss_pred CeEEEEEEEEECCCC-CEEEEEecCCC----eEEECCcCEE-CCCCEEEEEEEEEcCC--C-ccEEEEEEEEECCCCEEE
Confidence 567778889999987 88888776443 6678999988 6899999999999742 2 2234555543 4445554
Q ss_pred eEE
Q 003970 762 SPL 764 (782)
Q Consensus 762 ~P~ 764 (782)
+++
T Consensus 112 v~L 114 (122)
T 2ys4_A 112 VSL 114 (122)
T ss_dssp CEE
T ss_pred EEE
Confidence 444
No 49
>3lxu_X Tripeptidyl-peptidase 2; spindle complex, aminopeptidase, hydrolase, phosphoprotein, protease; 3.14A {Drosophila melanogaster}
Probab=87.35 E-value=0.28 Score=60.50 Aligned_cols=25 Identities=32% Similarity=0.598 Sum_probs=22.9
Q ss_pred CCCCCCCcEEEEeccccCCCCCCCC
Q 003970 130 QLAYGDDIVVGIFDTGVWPESESFQ 154 (782)
Q Consensus 130 ~~~~G~gV~VgVIDtGId~~Hp~f~ 154 (782)
..+.|+||+|||+|||||+.+|-|+
T Consensus 31 P~ydGrgv~iai~DtGVDP~a~glq 55 (1354)
T 3lxu_X 31 PEYDGRDVTIAIFDSGVDPRATGLE 55 (1354)
T ss_dssp TTCSSTTCEEEEEESCCCTTSTTSS
T ss_pred CCCCCCccEEEEEeCCCCCCCCcce
Confidence 3678999999999999999999985
No 50
>1y9z_A Alkaline serine protease; subtilisin-like alpha/beta domain, insert beta barrel domain hydrolase; HET: PMS; 1.40A {Pseudoalteromonas SP} PDB: 1v6c_A* 1wvm_A*
Probab=85.29 E-value=2 Score=47.38 Aligned_cols=31 Identities=23% Similarity=0.279 Sum_probs=26.8
Q ss_pred CCCccccccCCCCCCCCCCCcccceeecCceEEeecCCC
Q 003970 489 PAPTVAYFSSRGPSSISPDILKPDITAPGIGVLAAWPPN 527 (782)
Q Consensus 489 ~~~~~a~fSS~Gp~~~~~~~~KPDI~APG~~I~sa~~~~ 527 (782)
..+.++.||++||. +||+|||++|+++++.+
T Consensus 182 ~~~~~~~~S~~g~~--------vdv~ApG~~i~s~~~~g 212 (441)
T 1y9z_A 182 SNLDHAAFSQYTDQ--------VEISGPGEAILSTVTVG 212 (441)
T ss_dssp TTCCBCTTSCCCTT--------EEEEEECSSEEEECSTT
T ss_pred CCCCCCccccCCCc--------eEEEeccCCeeccccCC
Confidence 35678999999986 69999999999998854
No 51
>3qbt_B Inositol polyphosphate 5-phosphatase OCRL-1; protein transport, vesicular trafficking, GTPase, LOWE syndr immunoglobulin fold, RAB8A, endocytosis; HET: GNP; 2.00A {Homo sapiens}
Probab=83.99 E-value=8.6 Score=34.96 Aligned_cols=85 Identities=13% Similarity=-0.157 Sum_probs=57.5
Q ss_pred ceEEEEEEEEecCCCCCeEEEEEEeCC----CccEEEEEcceeEeccCCeEEEEEEEEEeccc-----CCC-ceEEEEEE
Q 003970 683 STMTIKRTVKNVGQKKNAIYFASVVKP----GGVEVVVWPRVLVFSWFKEEVSYYVSLKPLKM-----SQG-RFDFGQIV 752 (782)
Q Consensus 683 ~~~~~~rtvtnv~~~~~~ty~~~~~~p----~g~~v~v~p~~~~~~~~g~~~~~~v~~~~~~~-----~~~-~~~~G~~~ 752 (782)
...+-+.+|+|.|.. +.+|++..... ..--++++|..-++ .+|++.+++|++..... ..+ .-+.--|+
T Consensus 43 ~~~~~~l~I~Ntg~v-pa~F~f~~~~~~~~~~~~wl~v~P~~G~L-~Pge~~~I~v~~~v~~~~~~~ln~g~~~l~diLv 120 (140)
T 3qbt_B 43 QLQKEKFQISNNGQV-PCHFSFIPKLNDSQYCKPWLRAEPFEGYL-EPNETVDISLDVYVSKDSVTILNSGEDKIEDILV 120 (140)
T ss_dssp CCEEEEEEEEECSSS-CEEEEEECCTTCSSSSCTTEEEESCEEEE-CTTCEEEEEEEECBCHHHHHHHHHSSSCSCEEEE
T ss_pred eeeeeEEEEEcCCcc-ceEEEEecCCCchhhhhHhhhcCCccccc-CCCCeeEEEEEEEEccCcccccccchhhhheeEE
Confidence 345666778999998 99999874321 11236778999888 78999999999986421 011 22344566
Q ss_pred EE-cCceEEEeEEEEEEc
Q 003970 753 WS-DGFHYVRSPLVVFVN 769 (782)
Q Consensus 753 ~~-~~~~~v~~P~~~~~~ 769 (782)
+. +++....+|+...+.
T Consensus 121 L~Ve~G~d~fI~v~g~~~ 138 (140)
T 3qbt_B 121 LHLDRGKDYFLTISGNYL 138 (140)
T ss_dssp EEETTSCEEEEEEEEEEC
T ss_pred EEeecCCcEEEEEecccc
Confidence 54 667778888876653
No 52
>2r39_A FIXG-related protein; structural GE PSI-2, protein structure initiative, midwest center for STR genomics, MCSG, iron, iron-sulfur; 2.02A {Vibrio parahaemolyticus}
Probab=68.11 E-value=20 Score=31.31 Aligned_cols=53 Identities=19% Similarity=-0.029 Sum_probs=42.0
Q ss_pred eEEEEEEEEecCCCCCeEEEEEEeCCCccEEEEEcceeEeccCCeEEEEEEEEEec
Q 003970 684 TMTIKRTVKNVGQKKNAIYFASVVKPGGVEVVVWPRVLVFSWFKEEVSYYVSLKPL 739 (782)
Q Consensus 684 ~~~~~rtvtnv~~~~~~ty~~~~~~p~g~~v~v~p~~~~~~~~g~~~~~~v~~~~~ 739 (782)
.-..+..|.|.... +.+|.+++...+|+++. .|..+.+ ++||..++.|.+..+
T Consensus 32 ~N~Ytlki~Nkt~~-~~~~~l~v~g~~~l~~~-g~~~i~v-~~g~~~~~~v~v~~~ 84 (118)
T 2r39_A 32 ENTYTLKVINKTQQ-VQEYNLDVKGLNDVSWY-GKQTIQV-EPGEVLNLPMSLGAD 84 (118)
T ss_dssp EEEEEEEEEECSSS-CEEEEEEEESCSSCEEE-SCCEEEE-CTTCEEEEEEEEEEC
T ss_pred EEEEEEEEEECCCC-CEEEEEEEeCCcccEEe-CCCcEEE-CCCCEEEEEEEEEEC
Confidence 45567778999988 99999999987776653 3556777 689999999999875
No 53
>2e6j_A Hydin protein; PAPD, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=68.03 E-value=7.1 Score=33.60 Aligned_cols=66 Identities=14% Similarity=0.168 Sum_probs=45.1
Q ss_pred CcCeEEEeec--CceEEEEEEEEecCCCCCeEEEEEEeC-CCccEEEEEcceeEeccCCeEEEEEEEEEec
Q 003970 672 NYPSITVSNL--QSTMTIKRTVKNVGQKKNAIYFASVVK-PGGVEVVVWPRVLVFSWFKEEVSYYVSLKPL 739 (782)
Q Consensus 672 n~ps~~~~~~--~~~~~~~rtvtnv~~~~~~ty~~~~~~-p~g~~v~v~p~~~~~~~~g~~~~~~v~~~~~ 739 (782)
+...+-++.+ ....+.+.+++|.|.. +..|+..... +.+...+++|..-.+ .+|++++++|++.+.
T Consensus 13 ~~~~ldFG~v~~g~~~~~~~~l~N~g~~-p~~~~~~~~~~~~~~~f~v~p~~g~i-~pg~~~~i~V~f~~~ 81 (112)
T 2e6j_A 13 NFELLDIGKVFTGSAHCYEAILYNKGSI-DALFNMTPPTSALGACFVFSPKEGII-EPSGVQAIQISFSSI 81 (112)
T ss_dssp SCSEEEEEEEESSCCEEEEEEEEECCSS-CEEEEECCCSSHHHHHCEEESSEEEE-CTTBCCEEEEEECCC
T ss_pred CcccEecEeEEECCEEEEEEEEEECCcc-eEEEEEecCCccccCcEEEECCcCEE-CCCCEEEEEEEEECC
Confidence 3334444433 2356667788999998 9999883211 112346778998888 689999999999974
No 54
>2qsv_A Uncharacterized protein; MCSG, structural genomics, porphyromonas gingivalis W83, PSI protein structure initiative; 2.10A {Porphyromonas gingivalis}
Probab=58.31 E-value=51 Score=32.10 Aligned_cols=80 Identities=11% Similarity=-0.041 Sum_probs=52.4
Q ss_pred eEEEEEEEEecCCCCCeEEEEEEeCCCccEEEEEcceeEeccCCeEEEEEEEEEecccCCCceEEEEEEEE--c--C-c-
Q 003970 684 TMTIKRTVKNVGQKKNAIYFASVVKPGGVEVVVWPRVLVFSWFKEEVSYYVSLKPLKMSQGRFDFGQIVWS--D--G-F- 757 (782)
Q Consensus 684 ~~~~~rtvtnv~~~~~~ty~~~~~~p~g~~v~v~p~~~~~~~~g~~~~~~v~~~~~~~~~~~~~~G~~~~~--~--~-~- 757 (782)
..+.+.+++|.|+. +.+++... .|.-+.+...|..| ++||+.+++|+++......-+...++|++. + + .
T Consensus 20 ~~~~~~~i~N~g~~-pl~i~~~~-~p~~~~~~~~~~~I---~PG~~g~I~vt~~~~~~~~~G~~~~~i~v~~~~~~~~~~ 94 (220)
T 2qsv_A 20 EGVVRLVVNNTDES-DLQVAVVS-LPSFVSLDDRAFRL---QAREPRELNLSLAVPRNMPPGMKDEPLVLEVTSPETGKK 94 (220)
T ss_dssp CCEEEEEEEECSSS-CEEEEEEE-CCTTEECSCCEEEE---CSSSCEEEEEEECCCTTCCSEEEEEEEEEEEECTTTCCE
T ss_pred cceEEEEEEeCCCC-ceEEEecc-CCCceEeeeCccee---CCCCceEEEEEEcchhcccCCceeeEEEEEEEcCCCCcc
Confidence 45567789999987 77776542 46666665556665 789999999999875443334556767664 3 3 2
Q ss_pred eEEEeEEEEEE
Q 003970 758 HYVRSPLVVFV 768 (782)
Q Consensus 758 ~~v~~P~~~~~ 768 (782)
...++|+....
T Consensus 95 ~~~~i~v~g~v 105 (220)
T 2qsv_A 95 AVDSVMVSLPL 105 (220)
T ss_dssp EEEEEEEEEEE
T ss_pred cccEEEEEEEE
Confidence 24466666544
No 55
>3idu_A Uncharacterized protein; all beta-protein, structural genomics, PSI-2, protein structure initiative; 1.70A {Pyrococcus furiosus} PDB: 2kl6_A
Probab=55.63 E-value=43 Score=29.74 Aligned_cols=53 Identities=21% Similarity=0.159 Sum_probs=37.3
Q ss_pred CceEEEEEEEEecCCCCCeEEEEEEeCCCccEEEEEcceeEeccCCeEEEEEEEEEe
Q 003970 682 QSTMTIKRTVKNVGQKKNAIYFASVVKPGGVEVVVWPRVLVFSWFKEEVSYYVSLKP 738 (782)
Q Consensus 682 ~~~~~~~rtvtnv~~~~~~ty~~~~~~p~g~~v~v~p~~~~~~~~g~~~~~~v~~~~ 738 (782)
+...+++.+|+|.|......|++.+.. .|-.+.-. ...+ ++|++++++++...
T Consensus 32 G~~~ti~vtV~N~G~~~a~~~~V~lyv-ng~~v~t~--~v~L-a~G~s~tv~f~~~~ 84 (127)
T 3idu_A 32 NKLAEYEVHVKNLGGIGVPSTKVRVYI-NGTLYKNW--TVSL-GPKEEKVLTFNWTP 84 (127)
T ss_dssp TCCEEEEEEEEECSSSCEEEEEEEEEE-TTEEEEEE--EEEE-CTTCEEEEEEEECC
T ss_pred CCEEEEEEEEEECCCCccCCcEEEEEE-CCEEEeeE--Eecc-CCCCeEEEEEEEEc
Confidence 357899999999997535678887765 35444332 3345 68999998888764
No 56
>3zyz_A Beta-D-glucoside glucohydrolase; HET: NAG BGC; 2.10A {Hypocrea jecorina} PDB: 3zz1_A* 4i8d_A*
Probab=50.35 E-value=1.8e+02 Score=33.80 Aligned_cols=54 Identities=11% Similarity=0.012 Sum_probs=34.2
Q ss_pred eEEEEEEEEecCCCCCeEE--EEEEeCCCcc-----EEEEEcceeEeccCCeEEEEEEEEEec
Q 003970 684 TMTIKRTVKNVGQKKNAIY--FASVVKPGGV-----EVVVWPRVLVFSWFKEEVSYYVSLKPL 739 (782)
Q Consensus 684 ~~~~~rtvtnv~~~~~~ty--~~~~~~p~g~-----~v~v~p~~~~~~~~g~~~~~~v~~~~~ 739 (782)
..+++.+|||+|+. ...- .+.+..|.+- ..-.--+.+.+ ++||+++++++++..
T Consensus 614 ~~~vsv~VtNtG~~-~G~EVvQlYv~~~~~~~~~P~k~L~gF~kv~L-~pGes~~V~~~l~~~ 674 (713)
T 3zyz_A 614 VATVTVDIANSGQV-TGAEVAQLYITYPSSAPRTPPKQLRGFAKLNL-TPGQSGTATFNIRRR 674 (713)
T ss_dssp EEEEEEEEEECSSS-CEEEEEEEEEECCTTSSSCCSCEEEEEEEEEE-CTTCEEEEEEEEEGG
T ss_pred eEEEEEEEEeCCCC-ccceeeeeeeecCCCCCCchhHHhhhccccee-CCCCeEEEEEEEcHH
Confidence 56889999999986 4443 3444545331 11111223445 789999999999875
No 57
>3qis_A Inositol polyphosphate 5-phosphatase OCRL-1; DENT disease, RAC1, RAB gtpases, APPL1, endocytic PATH golgi complex, hydrolase-protein binding complex; 2.30A {Homo sapiens} PDB: 2qv2_A
Probab=50.29 E-value=43 Score=35.60 Aligned_cols=86 Identities=12% Similarity=-0.176 Sum_probs=56.1
Q ss_pred ceEEEEEEEEecCCCCCeEEEEEEeCCCccE----EEEEcceeEeccCCeEEEEEEEEEeccc----CC--CceEEEEEE
Q 003970 683 STMTIKRTVKNVGQKKNAIYFASVVKPGGVE----VVVWPRVLVFSWFKEEVSYYVSLKPLKM----SQ--GRFDFGQIV 752 (782)
Q Consensus 683 ~~~~~~rtvtnv~~~~~~ty~~~~~~p~g~~----v~v~p~~~~~~~~g~~~~~~v~~~~~~~----~~--~~~~~G~~~ 752 (782)
...+-+.||+|.|.. +.+|++......... ++++|..-++ .+|++++++|++..... .+ ..-..--|+
T Consensus 46 ~~~~~~l~i~N~g~~-pa~f~f~~~~~~~~~~~~wl~v~p~~g~l-~Pge~~~i~l~~~v~~~~~~~ln~g~~~l~diLv 123 (366)
T 3qis_A 46 QLQKEKFQISNNGQV-PCHFSFIPKLNDSQYCKPWLRAEPFEGYL-EPNETVDISLDVYVSKDSVTILNSGEDKIEDILV 123 (366)
T ss_dssp CCEEEEEEEEECSSS-CEEEEEECCTTCSSSSCTTEEEESCEEEE-CTTCEEEEEEEECBCTTTHHHHHHTSSCSCEEEE
T ss_pred CeEEEEEEEEecCCc-eEEEEEEeCCCCCCCCCCcEEEeCCccEE-CCCCEEEEEEEEEECHHHHHHHhcCccccceEEE
Confidence 456666778999998 999998654322222 7789999888 68999999999987531 00 112233455
Q ss_pred EE-cCceEEEeEEEEEEcC
Q 003970 753 WS-DGFHYVRSPLVVFVNN 770 (782)
Q Consensus 753 ~~-~~~~~v~~P~~~~~~~ 770 (782)
+. ++++...+|+-..+..
T Consensus 124 L~ve~G~d~FI~v~~~~~~ 142 (366)
T 3qis_A 124 LHLDRGKDYFLTISGNYLP 142 (366)
T ss_dssp EEETTSCEEEEEEEEEECC
T ss_pred EEEeCCCcEEEEeccccCC
Confidence 43 4556666776666543
No 58
>2x41_A Beta-glucosidase; hydrolase, TIM barrel fold, fibronectin type III fold; HET: BGC; 2.05A {Thermotoga neapolitana} PDB: 2x40_A* 2x42_A*
Probab=41.54 E-value=2e+02 Score=33.34 Aligned_cols=69 Identities=13% Similarity=0.165 Sum_probs=41.7
Q ss_pred CCCcCeEEEeec-----CceEEEEEEEEecCCC-CCeEEEEEEeCCCcc-----EEEEEccee-EeccCCeEEEEEEEEE
Q 003970 670 FINYPSITVSNL-----QSTMTIKRTVKNVGQK-KNAIYFASVVKPGGV-----EVVVWPRVL-VFSWFKEEVSYYVSLK 737 (782)
Q Consensus 670 ~ln~ps~~~~~~-----~~~~~~~rtvtnv~~~-~~~ty~~~~~~p~g~-----~v~v~p~~~-~~~~~g~~~~~~v~~~ 737 (782)
-|.|.+|...++ .+..+++.+|||+|+. +.++-.+-+..|.+- ..-.--..+ .+ ++||+++++++++
T Consensus 597 GLSYTtF~ys~~~~~~~~~~~~v~v~VtNtG~~~G~eVvQlYv~~~~~~~~~P~k~L~gF~kv~~L-~pGes~~V~~~l~ 675 (721)
T 2x41_A 597 GLSYTTFEYSDLNVSFDGETLRVQYRIENTGGRAGKEVSQVYIKAPKGKIDKPFQELKAFHKTRLL-NPGESEEVVLEIP 675 (721)
T ss_dssp CBCSSCEEEEEEEEEECSSEEEEEEEEEECSSSCBCCEEEEEEECCCSSSCCCSCEEEEEEECCCB-CTTCEEEEEEEEE
T ss_pred CCCcceeEeeceEeecCCCeEEEEEEEEECCCCCCcEEeeEEEccCCCCCCCchHHhhcccccccC-CCCCeEEEEEEEC
Confidence 345555554443 3467899999999975 244455555555431 111112233 34 7899999999998
Q ss_pred ec
Q 003970 738 PL 739 (782)
Q Consensus 738 ~~ 739 (782)
..
T Consensus 676 ~~ 677 (721)
T 2x41_A 676 VR 677 (721)
T ss_dssp GG
T ss_pred HH
Confidence 75
No 59
>1wgl_A TOLL-interacting protein; CUE domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, immune system; NMR {Homo sapiens} SCOP: a.5.2.4
Probab=38.25 E-value=22 Score=27.08 Aligned_cols=36 Identities=25% Similarity=0.181 Sum_probs=27.7
Q ss_pred cchhhHHHHHHHHHHHhCCCCCHHHHHHHHHhcccc
Q 003970 549 SMSCPHVSGVVALIKSAHPNWSPAAIRSALMTTAYT 584 (782)
Q Consensus 549 SmAaP~VAG~aALl~q~~P~lsp~~Ik~~L~~TA~~ 584 (782)
|-..|..--.+..|++.||+++...|+..|...-..
T Consensus 3 ~~~~~~~ee~l~~L~emFP~ld~~~I~~vL~a~~gd 38 (59)
T 1wgl_A 3 SGSSGCSEEDLKAIQDMFPNMDQEVIRSVLEAQRGN 38 (59)
T ss_dssp SCSSSSCHHHHHHHHHHCSSSCHHHHHHHHTTTTTC
T ss_pred CCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHcCCC
Confidence 333444455678899999999999999999877543
No 60
>1w8o_A Bacterial sialidase; 3D-structure, glycosidase, hydrolase, beta- propeller; HET: LBT CIT; 1.70A {Micromonospora viridifaciens} SCOP: b.1.18.2 b.18.1.1 b.68.1.1 PDB: 1w8n_A* 1eut_A 1euu_A* 1wcq_A* 2bzd_A* 2ber_A* 1eur_A 1eus_A*
Probab=35.95 E-value=2.2e+02 Score=31.80 Aligned_cols=65 Identities=11% Similarity=-0.027 Sum_probs=43.4
Q ss_pred CcCeEEEeecCceEEEEEEEEecCCCCCeEE-EEEEeCCCccEEEEEcceeEeccCCeEEEEEEEEEeccc
Q 003970 672 NYPSITVSNLQSTMTIKRTVKNVGQKKNAIY-FASVVKPGGVEVVVWPRVLVFSWFKEEVSYYVSLKPLKM 741 (782)
Q Consensus 672 n~ps~~~~~~~~~~~~~rtvtnv~~~~~~ty-~~~~~~p~g~~v~v~p~~~~~~~~g~~~~~~v~~~~~~~ 741 (782)
..|.+++..- ++.+++.+|+|-+.. .... ++++..|.+.+++. ....+ ++|++.+++++|+.+..
T Consensus 363 ~~~~~~~~~g-~~~~~~~~vtn~~~~-~~~~~~~~~~~~~~~~~~~--~~~~~-~~g~~~t~~~~vt~~~~ 428 (601)
T 1w8o_A 363 TIPDVALEPG-QQVTVPVAVTNQSGI-AVPKPSLQLDASPDWQVQG--SVEPL-MPGRQAKGQVTITVPAG 428 (601)
T ss_dssp ECCCEEECTT-CEEEEEEEEECCSSS-CBSSCEEEEECCTTSEEEE--EECCB-CTTCEEEEEEEEECCTT
T ss_pred cCccceecCC-ceeEEEEEEECCCce-eccCceEEEecCCCcEEec--ccccc-CCCCceEEEEEEecCCC
Confidence 3466776643 578888999997542 2211 34466788988776 34445 57999999888887543
No 61
>1m1s_A WR4; structural genomics, major sperm protein, bioinformatics, PSI, protein structure initiative; 1.80A {Caenorhabditis elegans} SCOP: b.1.11.2
Probab=33.71 E-value=1.9e+02 Score=25.11 Aligned_cols=50 Identities=8% Similarity=-0.039 Sum_probs=40.0
Q ss_pred EEEEEEEecCCCCCeEEEEEEeCCCccEEEEEcceeEeccCCeEEEEEEEEEec
Q 003970 686 TIKRTVKNVGQKKNAIYFASVVKPGGVEVVVWPRVLVFSWFKEEVSYYVSLKPL 739 (782)
Q Consensus 686 ~~~rtvtnv~~~~~~ty~~~~~~p~g~~v~v~p~~~~~~~~g~~~~~~v~~~~~ 739 (782)
+.+.+|+|.++. .-.|++.-..|.- ..|.|..-.+ .+|++.++.|+....
T Consensus 26 ~~~l~L~N~t~~-~vAFKVKtT~p~~--YrVrP~~G~I-~Pg~~~~I~I~~q~~ 75 (116)
T 1m1s_A 26 NSTHNITSESDS-RLAFKVKSSNNEH--YRVRPVYGFV-DAKGKSKLDINRLPG 75 (116)
T ss_dssp EEEEEEEECSSS-EEEEEEEESCTTT--EEEECSEEEE-CTTCEEEEEEEECSC
T ss_pred EEEEEEECCCCC-eEEEEEEecCCCc--eEEcCCceEE-CCCCeEEEEEEeCCC
Confidence 556788999987 8888888888876 4567887756 789999999999864
No 62
>3isy_A Bsupi, intracellular proteinase inhibitor; intracellular proteinase inhibitor bsupi, beta sandwich, GRE structural genomics; HET: PG4; 2.61A {Bacillus subtilis}
Probab=32.57 E-value=2.5e+02 Score=24.48 Aligned_cols=69 Identities=12% Similarity=-0.009 Sum_probs=40.0
Q ss_pred cCceEEEEEEEEecCCCCCeE--------EEEEEeCCCccEEEE---------EcceeEeccCCeEEEEEEEEEecccCC
Q 003970 681 LQSTMTIKRTVKNVGQKKNAI--------YFASVVKPGGVEVVV---------WPRVLVFSWFKEEVSYYVSLKPLKMSQ 743 (782)
Q Consensus 681 ~~~~~~~~rtvtnv~~~~~~t--------y~~~~~~p~g~~v~v---------~p~~~~~~~~g~~~~~~v~~~~~~~~~ 743 (782)
..+...++.+|+|.++. +-+ |.+.+....|-.|-- -....++ ++||+++|+.+... ....
T Consensus 16 ~g~~v~~~ltv~N~s~~-~v~l~f~Sgq~~Df~v~d~~G~~VwrwS~~~~FtQa~~~~tl-~pGE~~~f~~~w~~-~~~p 92 (120)
T 3isy_A 16 EPEQIKFNMSLKNQSER-AIEFQFSTGQKFELVVYDSEHKERYRYSKEKMFTQAFQNLTL-ESGETYDFSDVWKE-VPEP 92 (120)
T ss_dssp CSSCEEEEEEEEECSSS-CEEEEESSSCCEEEEEECTTCCEEEETTTTCCCCCCCEEEEE-CTTCEEEEEEEESS-CCCS
T ss_pred CCCeEEEEEEEEcCCCC-cEEEEeCCCCEEEEEEECCCCCEEEEccccchhhhhhceEEE-CCCCEEEEEEEeCC-CCCC
Confidence 34578888899998864 332 444454444533321 1124455 68999999999983 1233
Q ss_pred Cce-EEEEEE
Q 003970 744 GRF-DFGQIV 752 (782)
Q Consensus 744 ~~~-~~G~~~ 752 (782)
+.| +.++++
T Consensus 93 G~Ytl~a~l~ 102 (120)
T 3isy_A 93 GTYEVKVTFK 102 (120)
T ss_dssp EEEEEEEEEC
T ss_pred ccEEEEEEEE
Confidence 444 445544
No 63
>1z9l_A Vesicle-associated membrane protein-associated protein A; VAP-A, cytoplasmic domain, protein binding; HET: MSE; 1.70A {Rattus norvegicus} PDB: 1z9o_A 2rr3_A 3ikk_A
Probab=30.87 E-value=1.2e+02 Score=26.49 Aligned_cols=53 Identities=19% Similarity=0.209 Sum_probs=42.5
Q ss_pred ceEEEEEEEEecCCCCCeEEEEEEeCCCccEEEEEcceeEeccCCeEEEEEEEEEec
Q 003970 683 STMTIKRTVKNVGQKKNAIYFASVVKPGGVEVVVWPRVLVFSWFKEEVSYYVSLKPL 739 (782)
Q Consensus 683 ~~~~~~rtvtnv~~~~~~ty~~~~~~p~g~~v~v~p~~~~~~~~g~~~~~~v~~~~~ 739 (782)
...+-..+|+|.++. .--|++.-.+|.- ..|.|..-.+ .++++.++.|++...
T Consensus 27 ~~~~~~l~L~N~s~~-~vaFKVKTT~p~~--y~VrP~~G~i-~P~~s~~v~V~~~~~ 79 (128)
T 1z9l_A 27 DVVTTNLKLQNPSDR-KVCFKVKTTAPRR--YCVRPNSGVI-DPGSIVTVSVMLQPF 79 (128)
T ss_dssp SCEEEEEEEECCSSS-CEEEEEEESCGGG--EEEESCEEEE-CTTCEEEEEEEECCC
T ss_pred ceEEEEEEEECCCCC-eEEEEEECCCCCc--eEEeCCCcEE-CCCCeEEEEEEECcC
Confidence 345667789999987 8889999888875 4567888766 789999999999864
No 64
>3abz_A Beta-glucosidase I; glycoside hydrolase family3 beta-glucosidase, PA14 domain, H; 2.15A {Kluyveromyces marxianus} PDB: 3ac0_A*
Probab=30.40 E-value=1.7e+02 Score=34.79 Aligned_cols=69 Identities=13% Similarity=0.081 Sum_probs=41.8
Q ss_pred CCCCcCeEEEe--ec---CceEEEEEEEEecC-CCCCeEE--EEEEeCCCc-c----EEEEEcceeEeccCCeEEEEEEE
Q 003970 669 SFINYPSITVS--NL---QSTMTIKRTVKNVG-QKKNAIY--FASVVKPGG-V----EVVVWPRVLVFSWFKEEVSYYVS 735 (782)
Q Consensus 669 ~~ln~ps~~~~--~~---~~~~~~~rtvtnv~-~~~~~ty--~~~~~~p~g-~----~v~v~p~~~~~~~~g~~~~~~v~ 735 (782)
.-|.|.+|... ++ .+..+++.+|||.| +. ...- .+.+..|.+ + ..-.--..+.+ ++||+++++++
T Consensus 716 ~GLSYTtF~ys~~~l~v~~~~~~v~v~V~NtG~~~-~G~eVvQlYv~~~~~~~~~P~k~L~gF~kv~L-~pGes~~V~~~ 793 (845)
T 3abz_A 716 YGLSYTTFELDISDFKVTDDKIAISVDVKNTGDKF-AGSEVVQVYFSALNSKVSRPVKELKGFEKVHL-EPGEKKTVNID 793 (845)
T ss_dssp CCBCSSCEEEEEEEEEECSSEEEEEEEEEECCSSC-CEEEEEEEEEEESSCSSCCCSCEEEEEEEEEE-CTTCEEEEEEE
T ss_pred CCCcceeEEEecccccccCCeEEEEEEEEECCcCC-CcceeeeeeEeCCCCCcchhhheeccceeEEE-CCCCEEEEEEE
Confidence 44666666666 44 35688999999999 75 4443 333443322 1 11111223345 78999999999
Q ss_pred EE-ec
Q 003970 736 LK-PL 739 (782)
Q Consensus 736 ~~-~~ 739 (782)
++ ..
T Consensus 794 l~~~~ 798 (845)
T 3abz_A 794 LELKD 798 (845)
T ss_dssp EEHHH
T ss_pred eCChH
Confidence 99 53
No 65
>1msp_A MSP, major sperm protein; cytoskeletal protein, cell motility protein; 2.50A {Ascaris suum} SCOP: b.1.11.2 PDB: 3msp_A 2bvu_A 2msp_A 1grw_A
Probab=29.65 E-value=1.4e+02 Score=26.12 Aligned_cols=51 Identities=22% Similarity=0.107 Sum_probs=41.2
Q ss_pred eEEEEEEEEecCCCCCeEEEEEEeCCCccEEEEEcceeEeccCCeEEEEEEEEEe
Q 003970 684 TMTIKRTVKNVGQKKNAIYFASVVKPGGVEVVVWPRVLVFSWFKEEVSYYVSLKP 738 (782)
Q Consensus 684 ~~~~~rtvtnv~~~~~~ty~~~~~~p~g~~v~v~p~~~~~~~~g~~~~~~v~~~~ 738 (782)
..+-..+|+|.++. .--|.+.-.+|.- ..|.|..-.+ .++++..+.|++..
T Consensus 26 ~~~~~l~l~N~s~~-~vaFKVKTT~p~~--y~VrP~~Gii-~P~~s~~v~V~~q~ 76 (126)
T 1msp_A 26 KHTYHIKITNAGGR-RIGWAIKTTNMRR--LSVDPPCGVL-DPKEKVLMAVSCDT 76 (126)
T ss_dssp CCCEEEEEEECSSS-CEEEEEEESCTTT--EEEESCEEEE-CTTCEEEEEEEECC
T ss_pred ceEEEEEEECCCCC-eEEEEEEcCCCCc--EEEECCCeEE-CCCCEEEEEEEecC
Confidence 34456678999987 8889999888886 4567888877 68999999999877
No 66
>2qsv_A Uncharacterized protein; MCSG, structural genomics, porphyromonas gingivalis W83, PSI protein structure initiative; 2.10A {Porphyromonas gingivalis}
Probab=29.40 E-value=3.8e+02 Score=25.62 Aligned_cols=88 Identities=14% Similarity=0.072 Sum_probs=47.2
Q ss_pred CeEEEeecC-ceEEEEEEEEecCCCCCeEEEEEEeCCCccEEEEEcceeEeccCCeEEEEEEEEEecccCCCce--EEEE
Q 003970 674 PSITVSNLQ-STMTIKRTVKNVGQKKNAIYFASVVKPGGVEVVVWPRVLVFSWFKEEVSYYVSLKPLKMSQGRF--DFGQ 750 (782)
Q Consensus 674 ps~~~~~~~-~~~~~~rtvtnv~~~~~~ty~~~~~~p~g~~v~v~p~~~~~~~~g~~~~~~v~~~~~~~~~~~~--~~G~ 750 (782)
..+-++.+. ...+.+.+++|.|.. +...+ .+...-|... +++..-.+ ++||+.+++|+++........| ....
T Consensus 124 ~~~dfG~i~g~~~~~~f~i~N~G~~-pL~I~-~v~~scgct~-~~~~~~~i-~PGe~~~i~v~~~~~~~~g~~~~~~~~~ 199 (220)
T 2qsv_A 124 TYLDMGQLDGETTKAAIEIRNVGAG-PLRLH-SVTTRNPALT-AVPDRTEI-KPGGSTLLRIAVDPQVMKAEGWQSIAAD 199 (220)
T ss_dssp CEEEEEECTTSCEEEEEEEEECSSS-CEEEE-EEEECSTTEE-EEESCSEE-CTTCEEEEEEEECHHHHHHTTCSEEEEE
T ss_pred eEEeeeccCCCeEEEEEEEEECCCC-CEEEE-EEEeCCCCEe-eecCCccC-CCCCEEEEEEEEecCCCCCcccceeccE
Confidence 344444443 456667789999976 66553 2233334322 22333334 7899999999998753211111 4455
Q ss_pred EEEE-c-C-ceEEEeEEE
Q 003970 751 IVWS-D-G-FHYVRSPLV 765 (782)
Q Consensus 751 ~~~~-~-~-~~~v~~P~~ 765 (782)
|+.. + . ...+++.|-
T Consensus 200 i~v~~N~~~~p~~~l~i~ 217 (220)
T 2qsv_A 200 ISIICNDPQAPLRRIKVK 217 (220)
T ss_dssp EEEEESCTTCSEEEEEEE
T ss_pred EEEEECCCCCcEEEEEEE
Confidence 5543 3 2 344455543
No 67
>2kq1_A BH0266 protein; solution NESG, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; NMR {Bacillus halodurans}
Probab=28.68 E-value=12 Score=32.80 Aligned_cols=45 Identities=22% Similarity=0.226 Sum_probs=29.7
Q ss_pred EEecCCCCCeEEEE--EEe-CCCccEEEEEcceeEec-cCCeEEEEEEEEEe
Q 003970 691 VKNVGQKKNAIYFA--SVV-KPGGVEVVVWPRVLVFS-WFKEEVSYYVSLKP 738 (782)
Q Consensus 691 vtnv~~~~~~ty~~--~~~-~p~g~~v~v~p~~~~~~-~~g~~~~~~v~~~~ 738 (782)
|++++ .++|++ .+. .|.|+++++.|..+++. ..-++++|.|++..
T Consensus 61 Ls~l~---~G~~~vpv~v~~lp~~v~v~v~P~~V~V~i~~~~~k~~pV~v~~ 109 (119)
T 2kq1_A 61 LTEAG---EGSHTVDVEHRGFPGDLAVTVEPRMARVQLEERQTVSVPVTVEM 109 (119)
T ss_dssp CTTCC---BEEEEEECEEESSCTTSEEEESCCEEEEEEESCCCCCCCCCCCC
T ss_pred CccCC---CCeEEEEEEEecCCCCeEEEEcCCEEEEEEEEEEEEEEEEEEEE
Confidence 34544 455554 445 68999999999988765 34456677776654
No 68
>1wic_A Hypothetical protein riken cDNA 6030424E15; beta sandwich fold, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: b.1.11.2
Probab=28.56 E-value=1.4e+02 Score=27.30 Aligned_cols=52 Identities=13% Similarity=-0.026 Sum_probs=41.9
Q ss_pred eEEEEEEEEecCCCCCeEEEEEEeCCCccEEEEEcceeEeccCCeEEEEEEEEEec
Q 003970 684 TMTIKRTVKNVGQKKNAIYFASVVKPGGVEVVVWPRVLVFSWFKEEVSYYVSLKPL 739 (782)
Q Consensus 684 ~~~~~rtvtnv~~~~~~ty~~~~~~p~g~~v~v~p~~~~~~~~g~~~~~~v~~~~~ 739 (782)
.++-..+|+|.+.. .--|++.-.+|.- ..|.|..-.+ .++++.++.|++...
T Consensus 36 ~~~~~l~L~N~s~~-~VaFKVKTT~p~~--y~VrP~~GiI-~P~~s~~V~V~lq~~ 87 (152)
T 1wic_A 36 EKKTLIVLTNVTKN-IVAFKVRTTAPEK--YRVKPSNSSC-DPGASIDIIVSPHGG 87 (152)
T ss_dssp CCCEEEEEEBCSSS-CEEEEEEESCTTT--EEEESSEEEE-CTTCEEEEEEEECSS
T ss_pred eEEEEEEEEcCCCC-eEEEEEECCCCCc--eeecCCCcEE-CCCCeEEEEEEecCc
Confidence 34556788999987 8889999888875 5567888777 789999999999864
No 69
>1row_A SSP-19, MSP-domain protein like family member; beta barrel, structural genomics, PSI, protein structure initiative; 2.00A {Caenorhabditis elegans} SCOP: b.1.11.2
Probab=25.73 E-value=2.4e+02 Score=24.00 Aligned_cols=50 Identities=6% Similarity=-0.039 Sum_probs=40.0
Q ss_pred EEEEEEEecCCCCCeEEEEEEeCCCccEEEEEcceeEeccCCeEEEEEEEEEec
Q 003970 686 TIKRTVKNVGQKKNAIYFASVVKPGGVEVVVWPRVLVFSWFKEEVSYYVSLKPL 739 (782)
Q Consensus 686 ~~~rtvtnv~~~~~~ty~~~~~~p~g~~v~v~p~~~~~~~~g~~~~~~v~~~~~ 739 (782)
+-+.+|+|.++. .-.|++.-..|.- ..|.|..-.+ .+|++.++.|+....
T Consensus 18 ~~~l~L~N~t~~-~vaFKVKtT~p~~--y~VrP~~G~I-~P~~~~~i~I~~q~~ 67 (109)
T 1row_A 18 SSTHKLVNGGAE-KIVFKIKSSNNNE--YRIAPVFGFV-DPSGSKDVVITRTAG 67 (109)
T ss_dssp EEEEEEEECSSS-CEEEEEEESCSSS--EEEECSEEEE-CTTEEEEEEEEECSC
T ss_pred eEEEEEEcCCCC-eEEEEEEeCCCCc--eEEcCCceEE-CCCCeEEEEEEeCCC
Confidence 356678999987 8889999888876 4567887766 789999999998864
No 70
>2cri_A Vesicle-associated membrane protein-associated protein A; VAP-A, VAP-33, beta sandwitch fold, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=24.10 E-value=1.6e+02 Score=26.46 Aligned_cols=52 Identities=17% Similarity=0.208 Sum_probs=41.9
Q ss_pred eEEEEEEEEecCCCCCeEEEEEEeCCCccEEEEEcceeEeccCCeEEEEEEEEEec
Q 003970 684 TMTIKRTVKNVGQKKNAIYFASVVKPGGVEVVVWPRVLVFSWFKEEVSYYVSLKPL 739 (782)
Q Consensus 684 ~~~~~rtvtnv~~~~~~ty~~~~~~p~g~~v~v~p~~~~~~~~g~~~~~~v~~~~~ 739 (782)
.++-..+|+|.+.. .--|++.-.+|.- ..|.|..-.+ .++++..+.|++...
T Consensus 32 ~~~~~l~L~N~s~~-~VaFKVKTT~p~~--y~VrP~~GiI-~P~~s~~v~V~l~~~ 83 (147)
T 2cri_A 32 VVTTNLKLQNPSDR-KVCFKVKTTAPRR--YCVRPNSGII-DPGSIVTVSVMLQPF 83 (147)
T ss_dssp CCCEEEEEECCSSS-CEEEEEEESCTTS--EEEESSEEEC-CTTCEEEEEEEECCC
T ss_pred eEEEEEEEECCCCC-cEEEEEECCCCcc--EEEcCCCcEE-CCCCeEEEEEEECCC
Confidence 44556788999987 8889999888886 4567888766 789999999999864
No 71
>1ni7_A ER75, hypothetical protein YGDK; RD-structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Escherichia coli} SCOP: d.224.1.1
Probab=23.62 E-value=57 Score=30.05 Aligned_cols=32 Identities=22% Similarity=0.257 Sum_probs=26.8
Q ss_pred eccccchhhHHHHHHHHHHHhCCCCCHHHHHHH
Q 003970 545 QSGTSMSCPHVSGVVALIKSAHPNWSPAAIRSA 577 (782)
Q Consensus 545 ~sGTSmAaP~VAG~aALl~q~~P~lsp~~Ik~~ 577 (782)
+.|-| =|+.|-|++|||.+.+-..+|+||.+.
T Consensus 79 F~adS-DA~IvkGL~AlL~~~~~G~tp~eIl~~ 110 (155)
T 1ni7_A 79 FFGDS-EGRIVRGLLAVLLTAVEGKTAAELQAQ 110 (155)
T ss_dssp CEEEE-SSHHHHHHHHHHHHHTTTCCHHHHHHS
T ss_pred EeeCC-ccHHHHHHHHHHHHHHcCCCHHHHHhC
Confidence 33555 479999999999999999999999753
No 72
>2l0d_A Cell surface protein; structural genomics, northeast structural genomics consortiu PSI-2, protein structure initiative; NMR {Methanosarcina acetivorans}
Probab=23.02 E-value=2.7e+02 Score=23.97 Aligned_cols=26 Identities=23% Similarity=0.414 Sum_probs=18.4
Q ss_pred CceEEEEEEEEecCCCCCeEEEEEEe
Q 003970 682 QSTMTIKRTVKNVGQKKNAIYFASVV 707 (782)
Q Consensus 682 ~~~~~~~rtvtnv~~~~~~ty~~~~~ 707 (782)
....+++-+|+|.|......+++.+.
T Consensus 18 ~~~~ti~atVkN~G~~~a~~~~V~ly 43 (114)
T 2l0d_A 18 NTVNTMTATIENQGNKDSTSFNVSLL 43 (114)
T ss_dssp TSEEEEEEEEEECSSSCBCCEEEEEE
T ss_pred CCeEEEEEEEEECCCCCCCCEEEEEE
Confidence 35789999999999742444665554
Done!