Your job contains 1 sequence.
>003974
MGRPVKRTSTQVAAEESNHSKARRRKLNLAEQQHQQQEEQREDEEVKEEPVELVTRVKKK
TQKNKPDSDLFFVSPPVSADEALKRYPDRYKALNEEEEVLQARCHYTQASVDGCLYNLGD
DAYVKAEEGAVDYIARIVELFESVDGEPYFKARWFYRAEDTVIKDLACLVDRKRVFLSDV
EDDNPLNCIVSKAKIAEVATNMDLEAKQKNIPPCDLYYDMKYTLPHLTFLNINNESNRRD
SDASSTISSETGSNSPIGQPEMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPH
ACKSLKFNHPETKVRNEAADDFLSLLKEWAKLCQYFSIYDTDKVPEQSLNFMSEEEEEEE
EEEEENDDDANVPNEEFEVERLIAVCYGDPNKTKKPGVYFKVRWKGYGPSEDTWEPIKGL
SKCKEKLKEFVTKGYRSNILPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLL
VFMDVIEYLKPKYVLMENVVDILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQF
RLRVFLWGARPFKKLPQYPLPTHEIVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAI
SDLPLVTNNESEDERKYGTVARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVN
NDDYERVCCIPKRKGANFRDLPGVLVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQ
SSTKPFGRLWWDEIVNTVVTRAQPHNRILLHPSQDRVLTIRENARLQGFPDCYQLFGPVK
ER
The BLAST search returned 3 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 003974
(782 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2025787 - symbol:CMT1 "chromomethylase 1" spec... 1924 9.7e-199 1
TAIR|locus:2205015 - symbol:CMT3 "chromomethylase 3" spec... 1895 1.1e-195 1
TAIR|locus:2117104 - symbol:CMT2 "chromomethylase 2" spec... 1866 1.4e-192 1
UNIPROTKB|Q7Y1I7 - symbol:MET1A "DNA (cytosine-5)-methylt... 370 2.4e-50 3
TAIR|locus:2122313 - symbol:AT4G08990 species:3702 "Arabi... 359 2.4e-47 3
TAIR|locus:2155959 - symbol:MET1 "methyltransferase 1" sp... 355 1.6e-45 3
TAIR|locus:2140892 - symbol:MEE57 "maternal effect embryo... 309 5.4e-45 3
MGI|MGI:94912 - symbol:Dnmt1 "DNA methyltransferase (cyto... 293 1.8e-44 4
ZFIN|ZDB-GENE-990714-15 - symbol:dnmt1 "DNA (cytosine-5-)... 304 1.7e-43 4
UNIPROTKB|F1S3I5 - symbol:DNMT1 "Cytosine-specific methyl... 302 6.6e-43 4
UNIPROTKB|P26358 - symbol:DNMT1 "DNA (cytosine-5)-methylt... 304 1.3e-42 4
UNIPROTKB|F5GX68 - symbol:DNMT1 "Cytosine-specific methyl... 304 1.3e-42 4
RGD|620979 - symbol:Dnmt1 "DNA (cytosine-5-)-methyltransf... 281 1.7e-42 4
UNIPROTKB|Q9Z330 - symbol:Dnmt1 "DNA (cytosine-5)-methylt... 281 1.7e-42 4
UNIPROTKB|Q92072 - symbol:DNMT1 "DNA (cytosine-5)-methylt... 301 9.1e-42 4
UNIPROTKB|Q24K09 - symbol:DNMT1 "DNA (cytosine-5)-methylt... 296 3.4e-41 4
UNIPROTKB|E2RHC6 - symbol:DNMT1 "Cytosine-specific methyl... 301 7.9e-41 4
UNIPROTKB|D4A8Z6 - symbol:Dnmt1 "Cytosine-specific methyl... 213 5.6e-35 4
UNIPROTKB|K7ENW7 - symbol:DNMT1 "DNA (cytosine-5)-methylt... 237 5.2e-28 2
TIGR_CMR|SPO_1049 - symbol:SPO_1049 "DNA methylase, C-5 c... 173 1.9e-24 4
UNIPROTKB|D4A0P3 - symbol:Dnmt1 "DNA (cytosine-5)-methylt... 149 1.7e-17 4
UNIPROTKB|O34939 - symbol:ydiO "Probable BsuMI modificati... 124 7.4e-11 3
UNIPROTKB|F1PAS9 - symbol:DNMT1 "Uncharacterized protein"... 143 1.5e-09 4
FB|FBgn0030854 - symbol:CG8289 species:7227 "Drosophila m... 129 4.2e-05 1
UNIPROTKB|O14717 - symbol:TRDMT1 "tRNA (cytosine(38)-C(5)... 108 8.2e-05 2
UNIPROTKB|E2RM86 - symbol:TRDMT1 "Uncharacterized protein... 103 0.00011 2
RGD|1564626 - symbol:RGD1564626 "similar to chromodomain ... 117 0.00022 1
UNIPROTKB|F1RN27 - symbol:MPHOSPH8 "Uncharacterized prote... 128 0.00023 1
UNIPROTKB|E2QXE3 - symbol:PARP4 "Uncharacterized protein"... 127 0.00030 1
ZFIN|ZDB-GENE-041008-138 - symbol:trdmt1 "tRNA aspartic a... 100 0.00037 3
UNIPROTKB|F1NN91 - symbol:CDYL2 "Uncharacterized protein"... 123 0.00039 1
UNIPROTKB|Q8N8U2 - symbol:CDYL2 "Chromodomain Y-like prot... 123 0.00039 1
MGI|MGI:1274787 - symbol:Trdmt1 "tRNA aspartic acid methy... 105 0.00060 3
UNIPROTKB|F8VNY3 - symbol:CBX5 "Chromobox protein homolog... 96 0.00089 1
>TAIR|locus:2025787 [details] [associations]
symbol:CMT1 "chromomethylase 1" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM;IEA] [GO:0006306 "DNA methylation"
evidence=IEA;ISS] [GO:0009294 "DNA mediated transformation"
evidence=IMP] InterPro:IPR000953 InterPro:IPR001025
InterPro:IPR001525 Pfam:PF00145 Pfam:PF01426 PRINTS:PR00105
PROSITE:PS50013 PROSITE:PS51038 SMART:SM00298 SMART:SM00439
Pfam:PF00385 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0006355 GO:GO:0003677 GO:GO:0006351 GO:GO:0016568
InterPro:IPR016197 SUPFAM:SSF54160 GO:GO:0009294 InterPro:IPR017984
InterPro:IPR023780 InterPro:IPR023779 PRINTS:PR00504
PROSITE:PS00598 EMBL:AC011713 EMBL:AF039364 EMBL:AF039366
EMBL:AF039367 EMBL:AF039368 EMBL:AF039369 EMBL:AF039370
EMBL:AF039371 EMBL:AF039372 EMBL:AF039373 EMBL:U53501
IPI:IPI00531370 IPI:IPI00782822 PIR:H96839 RefSeq:NP_565245.1
UniGene:At.5460 ProteinModelPortal:O49139 SMR:O49139 STRING:O49139
REBASE:3262 PaxDb:O49139 PRIDE:O49139 EnsemblPlants:AT1G80740.1
GeneID:844413 KEGG:ath:AT1G80740 TAIR:At1g80740 eggNOG:COG0270
InParanoid:O49139 KO:K00558 OMA:FPDCYKL PhylomeDB:O49139
ProtClustDB:CLSN2917515 ArrayExpress:O49139 Genevestigator:O49139
GermOnline:AT1G80740 GO:GO:0003886 GO:GO:0090116 InterPro:IPR025821
PANTHER:PTHR10629 Uniprot:O49139
Length = 791
Score = 1924 (682.3 bits), Expect = 9.7e-199, P = 9.7e-199
Identities = 382/744 (51%), Positives = 505/744 (67%)
Query: 59 KKTQKNKPDSDLFFVSPPVSADEALKRYPDRY------------KALN-----EEEEVL- 100
K+ ++ +P+SDL F P+S E+ R+P RY K N E+EE++
Sbjct: 6 KQKKRAEPESDLCFAGKPMSVVESTIRWPHRYQSKKTKLQAPTKKPANKGGKKEDEEIIK 65
Query: 101 QARCHYTQASVDGCLYNLGDDAYVKAEEGAVDYIARIVELFESVDGEPYFKARWFYRAED 160
QA+CH+ +A VDG L NL DD YV G + +IA+++ELFE+ DG PY + RW+YR ED
Sbjct: 66 QAKCHFDKALVDGVLINLNDDVYVTGLPGKLKFIAKVIELFEADDGVPYCRFRWYYRPED 125
Query: 161 TVIKDLACLVDRKRVFLSDVEDDNPLNCIVSKAKIAEVAT-NMDLEAKQKNIPPCDLYYD 219
T+I+ + LV KRVFLS+ E+DNPL CI SK IA+V + +Q+ IPPCD YYD
Sbjct: 126 TLIERFSHLVQPKRVFLSNDENDNPLTCIWSKVNIAKVPLPKITSRIEQRVIPPCDYYYD 185
Query: 220 MKYTLPHLTFLNINNESNRRDXXXXXXXXXXXXXXXPIGQPEMSLLDLYSGCGAMSTGLC 279
MKY +P+L F + ++ S D + + E LLDLYSGCGAMSTG C
Sbjct: 186 MKYEVPYLNFTSADDGS---DASSSLSSDSALNCFENLHKDEKFLLDLYSGCGAMSTGFC 242
Query: 280 IGASLSGVKLVTRWAIDINPHACKSLKFNHPETKVRNEAADDFLSLLKEWAKLCQYFSIY 339
+GAS+SGVKL+T+W++DIN AC SLK NHPET+VRNEAA+DFL+LLKEW +LC+ FS+
Sbjct: 243 MGASISGVKLITKWSVDINKFACDSLKLNHPETEVRNEAAEDFLALLKEWKRLCEKFSLV 302
Query: 340 DTDKVPEQSLNFMSXXXXXXXXXXXXNDDDANVPNEEFEVERLIAVCYGDPNKTKKPGVY 399
+ + P +S++ + A + EFEVE+ + + +GDP T + +
Sbjct: 303 SSTE-PVESISELEDEEVEENDDIDEASTGAELEPGEFEVEKFLGIMFGDPQGTGEKTLQ 361
Query: 400 FKVRWKGYGPSEDTWEPIKGLSKCKEKLKEFVTKGYRSNILPLPGDVDFICGGPPCQGVS 459
VRWKGY S DTWEP GL CKEKLKE+V G++S++LPLPG V +CGGPPCQG+S
Sbjct: 362 LMVRWKGYNSSYDTWEPYSGLGNCKEKLKEYVIDGFKSHLLPLPGTVYTVCGGPPCQGIS 421
Query: 460 GFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILKFSGGFLARYAVGRLV 519
G+NR+RN +A LED KN+QLLVF+D+I++LKP YVLMENVVD+L+FS GFLAR+AV V
Sbjct: 422 GYNRYRNNEAPLEDQKNQQLLVFLDIIDFLKPNYVLMENVVDLLRFSKGFLARHAVASFV 481
Query: 520 SMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYPLPTHEIVARGVIPNEFQEII 579
+M+YQTRLG+MAAGSYGLPQ R RVFLW A+P +KLP YPLPTHE+ + P EF+++
Sbjct: 482 AMNYQTRLGMMAAGSYGLPQLRNRVFLWAAQPSEKLPPYPLPTHEVAKKFNTPKEFKDLQ 541
Query: 580 VAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYGTVA-RTEFQKYIRLRRHDVVN 638
V + +L+ + L+DAISDLP VTN + D Y A +TEF+ +I L+R +
Sbjct: 542 VGRIQMEFLKLDNALTLADAISDLPPVTNYVANDVMDYNDAAPKTEFENFISLKRSET-- 599
Query: 639 LSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGANFRDLPGVLVGPDNKVRWDPSM 698
L A L+DH+P + +DD ERV IPK+KGAN+RD+PGVLV +NK +P
Sbjct: 600 LLPAFGGDPTRRLFDHQPLVLGDDDLERVSYIPKQKGANYRDMPGVLVH-NNKAEINPRF 658
Query: 699 ERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTRAQPHNRILLHPSQDRVL 758
R LKSGK +VP YA+ F S KPFGRLW DEIVNTVVTRA+PHN+ ++HP Q+RVL
Sbjct: 659 -RAKLKSGKNVVPAYAISFIKGKSKKPFGRLWGDEIVNTVVTRAEPHNQCVIHPMQNRVL 717
Query: 759 TIRENARLQGFPDCYQLFGPVKER 782
++RENARLQGFPDCY+L G +KE+
Sbjct: 718 SVRENARLQGFPDCYKLCGTIKEK 741
>TAIR|locus:2205015 [details] [associations]
symbol:CMT3 "chromomethylase 3" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM;IEA] [GO:0006306 "DNA methylation"
evidence=IEA;RCA;IMP] [GO:0006342 "chromatin silencing"
evidence=IGI;RCA] [GO:0010425 "DNA methylation on cytosine within a
CNG sequence" evidence=IMP] [GO:0045814 "negative regulation of
gene expression, epigenetic" evidence=IGI] [GO:0003886 "DNA
(cytosine-5-)-methyltransferase activity" evidence=IMP] [GO:0010069
"zygote asymmetric cytokinesis in embryo sac" evidence=IMP]
[GO:0051567 "histone H3-K9 methylation" evidence=IGI;RCA]
[GO:0006260 "DNA replication" evidence=RCA] [GO:0006261
"DNA-dependent DNA replication" evidence=RCA] [GO:0006270 "DNA
replication initiation" evidence=RCA] [GO:0006275 "regulation of
DNA replication" evidence=RCA] [GO:0006346 "methylation-dependent
chromatin silencing" evidence=RCA] [GO:0008283 "cell proliferation"
evidence=RCA] [GO:0009909 "regulation of flower development"
evidence=RCA] [GO:0016458 "gene silencing" evidence=RCA]
[GO:0016572 "histone phosphorylation" evidence=RCA] [GO:0031047
"gene silencing by RNA" evidence=RCA] [GO:0031048 "chromatin
silencing by small RNA" evidence=RCA] [GO:0034968 "histone lysine
methylation" evidence=RCA] [GO:0051726 "regulation of cell cycle"
evidence=RCA] InterPro:IPR000953 InterPro:IPR001025
InterPro:IPR001525 InterPro:IPR018117 Pfam:PF00145 Pfam:PF01426
PRINTS:PR00105 PROSITE:PS00094 PROSITE:PS50013 PROSITE:PS51038
SMART:SM00298 SMART:SM00439 Pfam:PF00385 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677 GO:GO:0006351
GO:GO:0006342 GO:GO:0051567 InterPro:IPR016197 SUPFAM:SSF54160
EMBL:AC013289 InterPro:IPR023780 InterPro:IPR023779 PROSITE:PS00598
eggNOG:COG0270 KO:K00558 GO:GO:0003886 InterPro:IPR025821
PANTHER:PTHR10629 TIGRFAMs:TIGR00675 EMBL:AF383170 EMBL:AF364174
IPI:IPI00534552 PIR:G96719 RefSeq:NP_177135.1 UniGene:At.35376
ProteinModelPortal:Q94F88 SMR:Q94F88 STRING:Q94F88 REBASE:4853
PaxDb:Q94F88 PRIDE:Q94F88 EnsemblPlants:AT1G69770.1 GeneID:843313
KEGG:ath:AT1G69770 TAIR:At1g69770 HOGENOM:HOG000082844
InParanoid:Q94F88 OMA:EWEKLCI PhylomeDB:Q94F88
ProtClustDB:CLSN2913566 Genevestigator:Q94F88 GermOnline:AT1G69770
GO:GO:0010425 GO:GO:0010069 Uniprot:Q94F88
Length = 839
Score = 1895 (672.1 bits), Expect = 1.1e-195, P = 1.1e-195
Identities = 375/714 (52%), Positives = 485/714 (67%)
Query: 89 RYKALNEEE-EVLQARCHYTQASVDGC-LYNLGDDAYVKAEEGAVDYIARIVELFESVDG 146
R K ++E+ E+++ARCHY +A VD +Y L DDAYV++ EG +I +I+E+FE +G
Sbjct: 81 RKKTKDDEKVEIIRARCHYRRAIVDERQIYELNDDAYVQSGEGKDPFICKIIEMFEGANG 140
Query: 147 EPYFKARWFYRAEDTVIKDLACLVDRKRVFLSDVEDDNPLNCIVSKAKIAEVATNMDLEA 206
+ YF ARWFYR DTV+K+ L+ +KRVF S+++D N L + K I + N E
Sbjct: 141 KLYFTARWFYRPSDTVMKEFEILIKKKRVFFSEIQDTNELGLLEKKLNILMIPLN---EN 197
Query: 207 KQKNIPP---CDLYYDMKYTLPHLTFLNINNE-----SNRRDXXXXXXXXXXXXXXXPIG 258
++ IP CD + DM Y LP+ TF I E S IG
Sbjct: 198 TKETIPATENCDFFCDMNYFLPYDTFEAIQQETMMAISESSTISSDTDIREGAAAISEIG 257
Query: 259 Q--------PEMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHP 310
+ + +LLDLYSGCGAMSTGLC+GA LSG+ LVT+WA+D+N HACKSL+ NHP
Sbjct: 258 ECSQETEGHKKATLLDLYSGCGAMSTGLCMGAQLSGLNLVTKWAVDMNAHACKSLQHNHP 317
Query: 311 ETKVRNEAADDFLSLLKEWAKLCQYFSIYDTDKVPEQS-LNFMSXXXXXXXXXXXX-NDD 368
ET VRN A+DFL LLKEW KLC +FS+ ++ E + L+ ++ N+D
Sbjct: 318 ETNVRNMTAEDFLFLLKEWEKLCIHFSLRNSPNSEEYANLHGLNNVEDNEDVSEESENED 377
Query: 369 DANVPNEEFEVERLIAVCYGDPNKTKKPGVYFKVRWKGYGPSEDTWEPIKGLSKCKEKLK 428
D V F V++++ + +G P K K G+Y KVRW Y S DTWEPI+GLS C+ K++
Sbjct: 378 DGEV----FTVDKIVGISFGVPKKLLKRGLYLKVRWLNYDDSHDTWEPIEGLSNCRGKIE 433
Query: 429 EFVTKGYRSNILPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEY 488
EFV GY+S ILPLPG VD +CGGPPCQG+SG NRFRN LED KN+QLLV+M+++EY
Sbjct: 434 EFVKLGYKSGILPLPGGVDVVCGGPPCQGISGHNRFRNLLDPLEDQKNKQLLVYMNIVEY 493
Query: 489 LKPKYVLMENVVDILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWG 548
LKPK+VLMENVVD+LK + G+LAR+AVGRL+ M+YQ R G+MAAG+YGL QFRLR FLWG
Sbjct: 494 LKPKFVLMENVVDMLKMAKGYLARFAVGRLLQMNYQVRNGMMAAGAYGLAQFRLRFFLWG 553
Query: 549 ARPFKKLPQYPLPTHEIVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTN 608
A P + +PQ+PLPTH++V RG I EFQ IVAY +L +LL D ISDLP V N
Sbjct: 554 ALPSEIIPQFPLPTHDLVHRGNIVKEFQGNIVAYDEGHTVKLADKLLLKDVISDLPAVAN 613
Query: 609 NESEDERKYGTVARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVC 668
+E DE Y T FQK+IRLR+ D + S ++ S+ +LYDH P +N +DYERVC
Sbjct: 614 SEKRDEITYDKDPTTPFQKFIRLRK-DEASGSQSKSKSKKHVLYDHHPLNLNINDYERVC 672
Query: 669 CIPKRKGANFRDLPGVLVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGR 728
+PKRKGANFRD PGV+VGP N V+ + ERV L+SGK LVPDYA+ + S KPFGR
Sbjct: 673 QVPKRKGANFRDFPGVIVGPGNVVKLEEGKERVKLESGKTLVPDYALTYVDGKSCKPFGR 732
Query: 729 LWWDEIVNTVVTRAQPHNRILLHPSQDRVLTIRENARLQGFPDCYQLFGPVKER 782
LWWDEIV TVVTRA+PHN++++HP Q+RVL+IRENARLQGFPD Y+LFGP K++
Sbjct: 733 LWWDEIVPTVVTRAEPHNQVIIHPEQNRVLSIRENARLQGFPDDYKLFGPPKQK 786
Score = 327 (120.2 bits), Expect = 5.6e-26, P = 5.6e-26
Identities = 72/184 (39%), Positives = 105/184 (57%)
Query: 72 FVSPPVSADEALKRYPDRYKAL---------------NEEEEVLQARCHYTQASVDGC-L 115
F+ P+ EA +PDRYK + +E+ E+++ARCHY +A VD +
Sbjct: 50 FLDEPIPESEAKSTWPDRYKPIEVQPPKASSRKKTKDDEKVEIIRARCHYRRAIVDERQI 109
Query: 116 YNLGDDAYVKAEEGAVDYIARIVELFESVDGEPYFKARWFYRAEDTVIKDLACLVDRKRV 175
Y L DDAYV++ EG +I +I+E+FE +G+ YF ARWFYR DTV+K+ L+ +KRV
Sbjct: 110 YELNDDAYVQSGEGKDPFICKIIEMFEGANGKLYFTARWFYRPSDTVMKEFEILIKKKRV 169
Query: 176 FLSDVEDDNPLNCIVSKAKIAEVATNMDLEAKQKNIPP---CDLYYDMKYTLPHLTFLNI 232
F S+++D N L + K I + N E ++ IP CD + DM Y LP+ TF I
Sbjct: 170 FFSEIQDTNELGLLEKKLNILMIPLN---ENTKETIPATENCDFFCDMNYFLPYDTFEAI 226
Query: 233 NNES 236
E+
Sbjct: 227 QQET 230
>TAIR|locus:2117104 [details] [associations]
symbol:CMT2 "chromomethylase 2" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM;IEA] [GO:0006306 "DNA methylation"
evidence=IEA;ISS] InterPro:IPR000953 InterPro:IPR001025
InterPro:IPR001525 Pfam:PF00145 Pfam:PF01426 PRINTS:PR00105
PROSITE:PS50013 PROSITE:PS51038 SMART:SM00298 SMART:SM00439
Pfam:PF00385 GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0006355 GO:GO:0003677 EMBL:AL021711 EMBL:AL161549
GO:GO:0006351 GO:GO:0016568 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR023780 PROSITE:PS00598 eggNOG:COG0270 KO:K00558
GO:GO:0003886 GO:GO:0090116 InterPro:IPR025821 PANTHER:PTHR10629
EMBL:AF383171 EMBL:BX828439 IPI:IPI00539325 PIR:T05039
RefSeq:NP_193637.2 UniGene:At.32846 ProteinModelPortal:Q94F87
SMR:Q94F87 STRING:Q94F87 REBASE:3168 PaxDb:Q94F87 PRIDE:Q94F87
EnsemblPlants:AT4G19020.1 GeneID:827640 KEGG:ath:AT4G19020
TAIR:At4g19020 InParanoid:Q94F87 OMA:NGCQLRR PhylomeDB:Q94F87
Genevestigator:Q94F87 GermOnline:AT4G19020 Uniprot:Q94F87
Length = 1295
Score = 1866 (661.9 bits), Expect = 1.4e-192, P = 1.4e-192
Identities = 367/739 (49%), Positives = 498/739 (67%)
Query: 62 QKNKPDSDLFFVSPPVSADEALKRYPDRYKAL----------NEEEE---VLQARCHYTQ 108
++NK S FF+ P+S +EA +R+ RY+ +E++E V CHY+Q
Sbjct: 514 EQNKR-SICFFIGEPLSCEEAQERWRWRYELKERKSKSRGQQSEDDEDKIVANVECHYSQ 572
Query: 109 ASVDGCLYNLGDDAYVKAEEGAVDYIARIVELFESVDGEPYFKARWFYRAEDTVIKDLAC 168
A VDG ++LGD AY+K EE ++ +IVE F++ DGE YF+ +WFYRA DT+++ A
Sbjct: 573 AKVDGHTFSLGDFAYIKGEEEET-HVGQIVEFFKTTDGESYFRVQWFYRATDTIMERQAT 631
Query: 169 LVDRKRVFLSDVEDDNPLNCIVSKAKIAEVATNMDLEAKQKNIPPCDLYYDMKYTLPHLT 228
D++R+F S V +DNP++C++SK + +V+ + L K +I D Y+DM+Y + + T
Sbjct: 632 NHDKRRLFYSTVMNDNPVDCLISKVTVLQVSPRVGL--KPNSIKS-DYYFDMEYCVEYST 688
Query: 229 FLNINNESNRRDXXXXXXXXXXXXXXXPIGQP-----EMSLLDLYSGCGAMSTGLCIGAS 283
F + N + I + E+ +LDLYSGCG MSTGL +GA
Sbjct: 689 FQTLRNPKTSENKLECCADVVPTESTESILKKKSFSGELPVLDLYSGCGGMSTGLSLGAK 748
Query: 284 LSGVKLVTRWAIDINPHACKSLKFNHPETKVRNEAADDFLSLLKEWAKLCQYFSIYDTDK 343
+SGV +VT+WA+D N ACKSLK NHP T+VRN+AA DFL LLKEW KLC+ + +++ D+
Sbjct: 749 ISGVDVVTKWAVDQNTAACKSLKLNHPNTQVRNDAAGDFLQLLKEWDKLCKRY-VFNNDQ 807
Query: 344 VPEQSLNFMSXXXXXXXXXXXXNDDDANVPNEEFEVERLIAVCYGDPNKTKKPGVYFKVR 403
+ +L ++ +DDD++ +EE+EVE+L+ +C+GD +KT K G+ FKV
Sbjct: 808 RTD-TLRSVNSTKETSGSSSS-SDDDSD--SEEYEVEKLVDICFGDHDKTGKNGLKFKVH 863
Query: 404 WKGYGPSEDTWEPIKGLSKCKEKLKEFVTKGYRSNILPLPGDVDFICGGPPCQGVSGFNR 463
WKGY EDTWE + LS C++ ++EFVT G++S ILPLPG V ICGGPPCQG+SG+NR
Sbjct: 864 WKGYRSDEDTWELAEELSNCQDAIREFVTSGFKSKILPLPGRVGVICGGPPCQGISGYNR 923
Query: 464 FRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILKFSGGFLARYAVGRLVSMDY 523
RN + L D +N+Q++VFMD++EYLKP YVLMENVVDIL+ G L RYA+ RLV+M Y
Sbjct: 924 HRNVDSPLNDERNQQIIVFMDIVEYLKPSYVLMENVVDILRMDKGSLGRYALSRLVNMRY 983
Query: 524 QTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYPLPTHEIVARGVIPNEFQEIIVAYA 583
Q RLGIM AG YGL QFR RVF+WGA P K LP +PLPTH+++ R +P EF+ +VAYA
Sbjct: 984 QARLGIMTAGCYGLSQFRSRVFMWGAVPNKNLPPFPLPTHDVIVRYGLPLEFERNVVAYA 1043
Query: 584 NNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYGTVARTEFQKYIRLRRHDVVNLSSAQ 643
QP +LEK ++L DAISDLP V+N+E ++ Y ++ +T+FQ+YIR + D+ +
Sbjct: 1044 EGQPRKLEKALVLKDAISDLPHVSNDEDREKLPYESLPKTDFQRYIRSTKRDLTGSAIDN 1103
Query: 644 MASRPSLLYDHRPFQVNNDDYERVCCIPKRKGANFRDLPGVLVGPDNKVRWDPSMERVML 703
R LL+DHRPF +N DDY RVC IPKRKGANFRDLPG++V +N V DPSME V+L
Sbjct: 1104 CNKRTMLLHDHRPFHINEDDYARVCQIPKRKGANFRDLPGLIVR-NNTVCRDPSMEPVIL 1162
Query: 704 KSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTRAQPHNRILLHPSQDRVLTIREN 763
SGKPLVP Y F+ S +PF RLWWDE V TV+T H++ LLHP QDRVLTIRE+
Sbjct: 1163 PSGKPLVPGYVFTFQQGKSKRPFARLWWDETVPTVLTVPTCHSQALLHPEQDRVLTIRES 1222
Query: 764 ARLQGFPDCYQLFGPVKER 782
ARLQGFPD +Q G +KER
Sbjct: 1223 ARLQGFPDYFQFCGTIKER 1241
>UNIPROTKB|Q7Y1I7 [details] [associations]
symbol:MET1A "DNA (cytosine-5)-methyltransferase 1A"
species:39947 "Oryza sativa Japonica Group" [GO:0010216
"maintenance of DNA methylation" evidence=ISS] [GO:0010424 "DNA
methylation on cytosine within a CG sequence" evidence=ISS]
[GO:0016458 "gene silencing" evidence=IMP] InterPro:IPR001025
InterPro:IPR001525 InterPro:IPR017198 InterPro:IPR018117
Pfam:PF00145 Pfam:PF01426 PIRSF:PIRSF037404 PRINTS:PR00105
PROSITE:PS00094 PROSITE:PS00095 PROSITE:PS51038 SMART:SM00439
GO:GO:0005634 GO:GO:0003677 GO:GO:0016458 EMBL:CM000140
eggNOG:COG0270 GO:GO:0003886 PANTHER:PTHR10629 TIGRFAMs:TIGR00675
GO:GO:0010216 EMBL:AF462029 EMBL:AB362510 EMBL:AC093713
EMBL:AK108034 ProteinModelPortal:Q7Y1I7 STRING:Q7Y1I7 REBASE:7658
Gramene:Q7Y1I7 GO:GO:0010424 InterPro:IPR022702 Pfam:PF12047
Uniprot:Q7Y1I7
Length = 1527
Score = 370 (135.3 bits), Expect = 2.4e-50, Sum P(3) = 2.4e-50
Identities = 89/247 (36%), Positives = 133/247 (53%)
Query: 440 LPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENV 499
LP+PG+V+FI GGPPCQG SG NRF Q+ ++ +L F+ EY +P++ L+ENV
Sbjct: 1182 LPVPGEVEFINGGPPCQGFSGMNRFN--QSPWSKVQCEMILAFLSFAEYFRPRFFLLENV 1239
Query: 500 VDILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYP 559
+ + F+ G R + L+ M YQ R GI+ AG+YG+ Q R R F+W A P + LP++P
Sbjct: 1240 RNFVSFNKGQTFRLTLASLLEMGYQVRFGILEAGAYGVAQSRKRAFIWAAAPGETLPEWP 1299
Query: 560 LPTHEIVA---RGVIPN-EFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDER 615
P H + + +P+ +F + + A P + + + D I DLP V N +
Sbjct: 1300 EPMHVFASPELKITLPDGKFYAAVKSTAAGAPF---RSITVRDTIGDLPAVENGAGKPTI 1356
Query: 616 KYGTVARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKG 675
+YG+ + FQK IR + MAS L DH ++N + R IPKR G
Sbjct: 1357 QYGSGPVSWFQKKIR-----------SDMAS----LNDHISKEMNELNLIRCKHIPKRPG 1401
Query: 676 ANFRDLP 682
++ DLP
Sbjct: 1402 CDWHDLP 1408
Score = 163 (62.4 bits), Expect = 2.4e-50, Sum P(3) = 2.4e-50
Identities = 46/134 (34%), Positives = 67/134 (50%)
Query: 651 LYDHRPFQVNNDDYERVCCIPKRKGANFRDLPGVLVGPDNKVRWDPSMERVMLKSGKPLV 710
L DH ++N + R IPKR G ++ DLP D KV+ M+ +
Sbjct: 1377 LNDHISKEMNELNLIRCKHIPKRPGCDWHDLP------DEKVKLSTGQ---MVDLIPWCL 1427
Query: 711 PDYAMKFEHQSSTKPFGRLWWDEIVNTVVTRAQPHNRI--LLHPSQDRVLTIRENARLQG 768
P+ A + H +GRL W+ T VT QP ++ HP QDR++T+RE AR QG
Sbjct: 1428 PNTAKR--HNQWKGLYGRLDWEGNFPTSVTDPQPMGKVGMCFHPEQDRIITVRECARSQG 1485
Query: 769 FPDCYQLFGPVKER 782
FPD Y+ G ++ +
Sbjct: 1486 FPDSYRFAGNIQNK 1499
Score = 128 (50.1 bits), Expect = 2.4e-50, Sum P(3) = 2.4e-50
Identities = 49/190 (25%), Positives = 86/190 (45%)
Query: 151 KARWFYRAEDTVIKDLACLVDRKRVFLSDVEDDNPLNCIVSKAKIA--EVATNMDLEAKQ 208
K R FYR +D + A D + V+ S+ P+ I K ++ + N DL A
Sbjct: 970 KVRRFYRPDD-ISSTKAYSSDIREVYYSEDIISVPVVMIEGKCEVRLKDDLPNSDLPAVV 1028
Query: 209 KNIPPCDLYYD-----MKYTLPHLTFLNINNE--SNRRDXXXXXXXXXXXXXXXPI-GQP 260
+++ C+ YD +K P++ + + + +++++ P GQ
Sbjct: 1029 EHVFCCEYLYDPANGALKQLPPNVRLVTLTRKVPASKKNKGKQICDIELGGSDKPKDGQS 1088
Query: 261 E--MSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKVRNEA 318
E ++ LD+++GCG +S GL SG+ L T+WAI+ A + NHPE V E
Sbjct: 1089 ENCLATLDIFAGCGGLSEGL----QRSGLSL-TKWAIEYEEPAGDAFGENHPEAAVFVEN 1143
Query: 319 ADDFLSLLKE 328
+ L + +
Sbjct: 1144 CNVILKAIMD 1153
>TAIR|locus:2122313 [details] [associations]
symbol:AT4G08990 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003886 "DNA
(cytosine-5-)-methyltransferase activity" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=ISM;IEA] [GO:0006306 "DNA
methylation" evidence=IEA;ISS] [GO:0090116 "C-5 methylation of
cytosine" evidence=IEA] InterPro:IPR001025 InterPro:IPR001525
InterPro:IPR017198 InterPro:IPR018117 Pfam:PF00145 Pfam:PF01426
PIRSF:PIRSF037404 PRINTS:PR00105 PROSITE:PS00094 PROSITE:PS00095
PROSITE:PS51038 SMART:SM00439 GO:GO:0005634 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0003677 EMBL:AL161513
eggNOG:COG0270 KO:K00558 GO:GO:0003886 PANTHER:PTHR10629
TIGRFAMs:TIGR00675 InterPro:IPR022702 Pfam:PF12047
HOGENOM:HOG000083447 ProtClustDB:CLSN2685944 IPI:IPI00549079
PIR:G85090 RefSeq:NP_192638.1 UniGene:At.54221 HSSP:P20589
ProteinModelPortal:Q9M0S8 SMR:Q9M0S8 STRING:Q9M0S8 REBASE:2839
PaxDb:Q9M0S8 PRIDE:Q9M0S8 EnsemblPlants:AT4G08990.1 GeneID:826477
KEGG:ath:AT4G08990 TAIR:At4g08990 InParanoid:Q9M0S8 OMA:YRISMER
PhylomeDB:Q9M0S8 ArrayExpress:Q9M0S8 Genevestigator:Q9M0S8
Uniprot:Q9M0S8
Length = 1512
Score = 359 (131.4 bits), Expect = 2.4e-47, Sum P(3) = 2.4e-47
Identities = 91/250 (36%), Positives = 130/250 (52%)
Query: 436 RSNILPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVL 495
+ + LPLPG DFI GGPPCQG SG NRF + + ++ +L F+ +Y +PKY L
Sbjct: 1157 QKSTLPLPGQADFISGGPPCQGFSGMNRFSD--GSWSKVQCEMILAFLSFADYFRPKYFL 1214
Query: 496 MENVVDILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKL 555
+ENV + ++ G + + L+ + YQ R GI+ AG+YG+ Q R RV +W A P + L
Sbjct: 1215 LENVKKFVTYNKGRTFQLTMASLLEIGYQVRFGILEAGTYGVSQPRKRVIIWAASPEEVL 1274
Query: 556 PQYPLPTHEIVARGV---IPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESE 612
P++P P H G +P V N + + + + D I DLPLV N ES+
Sbjct: 1275 PEWPEPMHVFDNPGSKISLPRGLHYDTVR--NTKFGAPFRSITVRDTIGDLPLVENGESK 1332
Query: 613 DERKYGTVARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPK 672
++Y T + FQK IR M S+L DH +N + R IPK
Sbjct: 1333 INKEYRTTPVSWFQKKIR-----------GNM----SVLTDHICKGLNELNLIRCKKIPK 1377
Query: 673 RKGANFRDLP 682
R GA++RDLP
Sbjct: 1378 RPGADWRDLP 1387
Score = 170 (64.9 bits), Expect = 2.4e-47, Sum P(3) = 2.4e-47
Identities = 47/136 (34%), Positives = 68/136 (50%)
Query: 649 SLLYDHRPFQVNNDDYERVCCIPKRKGANFRDLPGVLVGPDNKVRWDPSMERVMLKSGKP 708
S+L DH +N + R IPKR GA++RDLP D V ++ +++ +P
Sbjct: 1354 SVLTDHICKGLNELNLIRCKKIPKRPGADWRDLP------DENV----TLSNGLVEKLRP 1403
Query: 709 LVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTRAQPHNRI--LLHPSQDRVLTIRENARL 766
L K H +GRL W + +T QP ++ HP QDR++T+RE AR
Sbjct: 1404 LALSKTAK-NHNEWKGLYGRLDWQGNLPISITDPQPMGKVGMCFHPEQDRIITVRECARS 1462
Query: 767 QGFPDCYQLFGPVKER 782
QGFPD Y+ G K +
Sbjct: 1463 QGFPDSYEFSGTTKHK 1478
Score = 104 (41.7 bits), Expect = 2.4e-47, Sum P(3) = 2.4e-47
Identities = 58/216 (26%), Positives = 93/216 (43%)
Query: 114 CLYNLGDDAYVKAEEGAVDYIARIVELFESVDGEPYFKARWFYRAEDTVIKDLACLVDRK 173
C N+G A+V + +D I + E ++ + K FYR ED + ++ A D +
Sbjct: 913 CGRNVGLKAFVVCQ--LLDVIV-LEESRKASNASFQVKLTRFYRPED-ISEEKAYASDIQ 968
Query: 174 RVFLSDVEDDNPLNCIVSKAKIAEVATNMDLEAKQK---NIPPCDLYYDMK--YT--LP- 225
++ S P + K ++ + +M L + +I C+++YD Y P
Sbjct: 969 ELYYSHDTYILPPEALQGKCEVRK-KNDMPLCREYPILDHIFFCEVFYDSSTGYLKQFPA 1027
Query: 226 --HLTFLNINNESNRRDXXXXXXXXXXXXXXX--PIGQP-EMSL--LDLYSGCGAMSTGL 278
L F I +E+ R+ P P EM L LD+++GCG +S GL
Sbjct: 1028 NMKLKFSTIKDETLLREKKGKGVETGTSSGILMKPDEVPKEMRLATLDIFAGCGGLSHGL 1087
Query: 279 CIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKV 314
+GV T+WAI+ A + K NHPE V
Sbjct: 1088 ----EKAGVSN-TKWAIEYEEPAGHAFKQNHPEATV 1118
Score = 45 (20.9 bits), Expect = 7.5e-08, Sum P(2) = 7.5e-08
Identities = 9/33 (27%), Positives = 18/33 (54%)
Query: 606 VTNNESEDERKYGTVARTEFQKYIRLRRHDVVN 638
++ S ++R T A +F YI++ H++ N
Sbjct: 306 ISMERSRNKRSSTTSASNKF--YIKINEHEIAN 336
>TAIR|locus:2155959 [details] [associations]
symbol:MET1 "methyltransferase 1" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM;IEA]
[GO:0006306 "DNA methylation" evidence=IEA;RCA] [GO:0090116 "C-5
methylation of cytosine" evidence=IEA] [GO:0010069 "zygote
asymmetric cytokinesis in embryo sac" evidence=IMP] [GO:0006349
"regulation of gene expression by genetic imprinting" evidence=IMP]
[GO:0010216 "maintenance of DNA methylation" evidence=IMP]
[GO:0010424 "DNA methylation on cytosine within a CG sequence"
evidence=IMP] [GO:0009294 "DNA mediated transformation"
evidence=IMP] [GO:0006260 "DNA replication" evidence=RCA]
[GO:0006261 "DNA-dependent DNA replication" evidence=RCA]
[GO:0006333 "chromatin assembly or disassembly" evidence=RCA]
[GO:0006342 "chromatin silencing" evidence=RCA] [GO:0008283 "cell
proliferation" evidence=RCA] [GO:0009909 "regulation of flower
development" evidence=RCA] [GO:0016458 "gene silencing"
evidence=RCA] [GO:0034968 "histone lysine methylation"
evidence=RCA] [GO:0051567 "histone H3-K9 methylation" evidence=RCA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0008168
"methyltransferase activity" evidence=TAS] [GO:0009910 "negative
regulation of flower development" evidence=IMP] InterPro:IPR001025
InterPro:IPR001525 InterPro:IPR017198 InterPro:IPR018117
Pfam:PF00145 Pfam:PF01426 PIRSF:PIRSF037404 PRINTS:PR00105
PROSITE:PS00094 PROSITE:PS00095 PROSITE:PS51038 SMART:SM00439
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
GO:GO:0016568 GO:GO:0009910 GO:GO:0008168 GO:GO:0006349
EMBL:AB016872 GO:GO:0009294 eggNOG:COG0270 KO:K00558 GO:GO:0003886
PANTHER:PTHR10629 TIGRFAMs:TIGR00675 GO:GO:0010069 GO:GO:0010216
GO:GO:0010424 InterPro:IPR022702 Pfam:PF12047 EMBL:L10692
EMBL:AY699012 EMBL:AK229013 EMBL:AK230148 IPI:IPI00536256
PIR:S59604 RefSeq:NP_199727.1 UniGene:At.20294
ProteinModelPortal:P34881 SMR:P34881 STRING:P34881 REBASE:11752
PaxDb:P34881 PRIDE:P34881 EnsemblPlants:AT5G49160.1 GeneID:834975
KEGG:ath:AT5G49160 TAIR:At5g49160 HOGENOM:HOG000083447
InParanoid:P34881 OMA:IWISTEL PhylomeDB:P34881
ProtClustDB:CLSN2685944 Genevestigator:P34881 GermOnline:AT5G49160
Uniprot:P34881
Length = 1534
Score = 355 (130.0 bits), Expect = 1.6e-45, Sum P(3) = 1.6e-45
Identities = 87/248 (35%), Positives = 129/248 (52%)
Query: 436 RSNILPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVL 495
+ + LPLPG VDFI GGPPCQG SG NRF Q++ ++ +L F+ +Y +P+Y L
Sbjct: 1179 QKSTLPLPGQVDFINGGPPCQGFSGMNRFN--QSSWSKVQCEMILAFLSFADYFRPRYFL 1236
Query: 496 MENVVDILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKL 555
+ENV + F+ G + + L+ M YQ R GI+ AG+YG+ Q R R F+W A P + L
Sbjct: 1237 LENVRTFVSFNKGQTFQLTLASLLEMGYQVRFGILEAGAYGVSQSRKRAFIWAAAPEEVL 1296
Query: 556 PQYPLPTHEIVARGVIPNEFQEIIVAYANNQPCQLE-KGVLLSDAISDLPLVTNNESEDE 614
P++P P H + + Q + A + + + + D I DLP V N +S
Sbjct: 1297 PEWPEPMHVFGVPKLKISLSQGLHYAAVRSTALGAPFRPITVRDTIGDLPSVENGDSRTN 1356
Query: 615 RKYGTVARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRK 674
++Y VA + FQK IR + + L+ DH +N + R IP R
Sbjct: 1357 KEYKEVAVSWFQKEIR---GNTIALT------------DHICKAMNELNLIRCKLIPTRP 1401
Query: 675 GANFRDLP 682
GA++ DLP
Sbjct: 1402 GADWHDLP 1409
Score = 145 (56.1 bits), Expect = 1.6e-45, Sum P(3) = 1.6e-45
Identities = 45/134 (33%), Positives = 61/134 (45%)
Query: 651 LYDHRPFQVNNDDYERVCCIPKRKGANFRDLPGVLVGPDNKVRWDPSMERVMLKSGKPLV 710
L DH +N + R IP R GA++ DLP KV M+ +
Sbjct: 1378 LTDHICKAMNELNLIRCKLIPTRPGADWHDLP------KRKVTLSDGRVEEMIPF---CL 1428
Query: 711 PDYAMKFEHQSSTKPFGRLWWDEIVNTVVTRAQPHNRI--LLHPSQDRVLTIRENARLQG 768
P+ A + H +GRL W T VT QP ++ HP Q R+LT+RE AR QG
Sbjct: 1429 PNTAER--HNGWKGLYGRLDWQGNFPTSVTDPQPMGKVGMCFHPEQHRILTVRECARSQG 1486
Query: 769 FPDCYQLFGPVKER 782
FPD Y+ G + +
Sbjct: 1487 FPDSYEFAGNINHK 1500
Score = 116 (45.9 bits), Expect = 1.6e-45, Sum P(3) = 1.6e-45
Identities = 49/178 (27%), Positives = 81/178 (45%)
Query: 151 KARWFYRAEDTVIKDLACLVDRKRVFLSDVEDDNPLNCIVSKAKIAEVATNMDLEAK--- 207
K R FYR ED V + A D + ++ S P + K ++ + ++M L +
Sbjct: 970 KVRRFYRPED-VSAEKAYASDIQELYFSQDTVVLPPGALEGKCEVRK-KSDMPLSREYPI 1027
Query: 208 QKNIPPCDLYYDM-KYTLPHLT------FLNINNESN-RRDXXXXXXXXXXXXXXXPIGQ 259
+I CDL++D K +L L F I +++ R+ P+
Sbjct: 1028 SDHIFFCDLFFDTSKGSLKQLPANMKPKFSTIKDDTLLRKKKGKGVESEIESEIVKPVEP 1087
Query: 260 PE---MSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKV 314
P+ ++ LD+++GCG +S GL A +S K WAI+ A ++ K NHPE+ V
Sbjct: 1088 PKEIRLATLDIFAGCGGLSHGLK-KAGVSDAK----WAIEYEEPAGQAFKQNHPESTV 1140
Score = 47 (21.6 bits), Expect = 2.5e-38, Sum P(3) = 2.5e-38
Identities = 18/75 (24%), Positives = 35/75 (46%)
Query: 106 YTQASVDGCLYNLGDDAYVKAEE-GAVDYIARIVELFESVDGEPYFKARWFYRAEDTVIK 164
Y QA V G + +G ++ ++ + I + +FES D R+ R TV+
Sbjct: 727 YQQALVGGEMVAVGGAVTLEVDDPDEMPAIYFVEYMFESTDHCKMLHGRFLQRGSMTVLG 786
Query: 165 DLACLVDRKRVFLSD 179
+ A + + +FL++
Sbjct: 787 NAA---NERELFLTN 798
Score = 39 (18.8 bits), Expect = 1.7e-37, Sum P(3) = 1.7e-37
Identities = 9/28 (32%), Positives = 15/28 (53%)
Query: 305 LKFNHPETKVRNEAADD---FLSLLKEW 329
+ N P++ ++ D FLS +KEW
Sbjct: 437 ISLNDPDSGSQSHDPDGMCIFLSQIKEW 464
>TAIR|locus:2140892 [details] [associations]
symbol:MEE57 "maternal effect embryo arrest 57"
species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003886 "DNA (cytosine-5-)-methyltransferase
activity" evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;IEA]
[GO:0006306 "DNA methylation" evidence=IEA;ISS] [GO:0090116 "C-5
methylation of cytosine" evidence=IEA] [GO:0009793 "embryo
development ending in seed dormancy" evidence=IMP] [GO:0006333
"chromatin assembly or disassembly" evidence=RCA]
InterPro:IPR001025 InterPro:IPR001525 InterPro:IPR017198
InterPro:IPR018117 Pfam:PF00145 Pfam:PF01426 PIRSF:PIRSF037404
PRINTS:PR00105 PROSITE:PS00094 PROSITE:PS00095 PROSITE:PS51038
SMART:SM00439 GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0003677 GO:GO:0009793 EMBL:AL049656 EMBL:AL161537
eggNOG:COG0270 KO:K00558 GO:GO:0003886 PANTHER:PTHR10629
HSSP:O14717 TIGRFAMs:TIGR00675 InterPro:IPR022702 Pfam:PF12047
HOGENOM:HOG000083447 ProtClustDB:CLSN2685944 REBASE:2839
IPI:IPI00536439 PIR:T06663 RefSeq:NP_193097.1 UniGene:At.54310
ProteinModelPortal:Q9T0I1 SMR:Q9T0I1 STRING:Q9T0I1 PRIDE:Q9T0I1
EnsemblPlants:AT4G13610.1 GeneID:826994 KEGG:ath:AT4G13610
TAIR:At4g13610 InParanoid:Q9T0I1 OMA:ENWTISG PhylomeDB:Q9T0I1
ArrayExpress:Q9T0I1 Genevestigator:Q9T0I1 Uniprot:Q9T0I1
Length = 1404
Score = 309 (113.8 bits), Expect = 5.4e-45, Sum P(3) = 5.4e-45
Identities = 67/178 (37%), Positives = 96/178 (53%)
Query: 436 RSNILPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVL 495
+ + LPLPG VDFI GGPPCQG S NRF + + + +L F+ +Y +PKY L
Sbjct: 1066 QKSTLPLPGQVDFISGGPPCQGFSRLNRFSDGSWSKNQCQ--MILAFLSFADYFRPKYFL 1123
Query: 496 MENVVDILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKL 555
+ENV + F+ G V L+ M YQ R G++ AG+YG+ Q R R F+W A P + L
Sbjct: 1124 LENVKTFVSFNEGHTFHLTVASLLEMGYQVRFGLLEAGAYGISQPRKRAFIWAAAPNEVL 1183
Query: 556 PQYPLPTHEIVARGV-IPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESE 612
P++P P H G IP A + + + + + DAI DLP + + ES+
Sbjct: 1184 PEWPEPMHVFNNPGFKIPLSQGLHYAAVQSTKFGAPFRSITVRDAIGDLPPIESGESK 1241
Score = 172 (65.6 bits), Expect = 5.4e-45, Sum P(3) = 5.4e-45
Identities = 49/149 (32%), Positives = 76/149 (51%)
Query: 639 LSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGANFRDLPGVLVGPDNKVRWDPSM 698
++ +M ++L DH ++N + R IPK GA++RDLP
Sbjct: 1242 INKEEMRGSMTVLTDHICKKMNELNLIRCKKIPKTPGADWRDLPD--------------- 1286
Query: 699 ERVMLKSG--KPLVPDYAMKFEHQSSTKP-FGRLWWDEIVNTVVTRAQPHNRI--LLHPS 753
E V L +G K +VP+ K + + K +GRL W + T +T QP + HP
Sbjct: 1287 EHVNLSNGIVKNIVPNLLNKAKDHNGYKGLYGRLDWHGNLPTCITNLQPMGLVGMCFHPD 1346
Query: 754 QDRVLTIRENARLQGFPDCYQLFGPVKER 782
QDR++++RE AR QGFPD Y+ G +K++
Sbjct: 1347 QDRIISVRECARSQGFPDSYKFSGNIKDK 1375
Score = 132 (51.5 bits), Expect = 5.4e-45, Sum P(3) = 5.4e-45
Identities = 58/213 (27%), Positives = 95/213 (44%)
Query: 134 IARIVELFESVDGEPY---FKARWFYRAEDTVIKDLACLVDRKRVFLSDVEDDNPLNCIV 190
I IV+L E G K R FYR +D ++ A D + V+ S+ P I
Sbjct: 830 ILDIVDLKEPKKGNTTSFEVKVRRFYRPDDVSAEE-AYASDIQEVYYSEDTYILPPEAIK 888
Query: 191 SKAKIAEVATNMDLEAKQK---NIPPCDLYYDMKY----TLPH---LTFLNINNESNRRD 240
K ++ + T+M L + ++ CD +YD LP+ L F I +++ R+
Sbjct: 889 GKCEVMK-KTDMPLCREYPILDHVYFCDRFYDSSNGCLKKLPYNMMLKFSTIKDDTLLRE 947
Query: 241 XXXXXXXXXXXX-XXXPIGQPEMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINP 299
P G+ ++ LD+++GCG +S GL +GV T+WAI+
Sbjct: 948 KKTETGSAMLLKPDEVPKGK-RLATLDIFAGCGGLSYGL----EKAGVS-DTKWAIEYEE 1001
Query: 300 HACKSLKFNHPETKVRNEAADDFLSLLKEWAKL 332
A ++ K NHP+T V + + L + W +L
Sbjct: 1002 PAAQAFKQNHPKTTVFVDNCNVILRI--SWLRL 1032
Score = 57 (25.1 bits), Expect = 3.5e-37, Sum P(3) = 3.5e-37
Identities = 22/89 (24%), Positives = 39/89 (43%)
Query: 96 EEEVLQARCH----YTQASVDGCLYNLGDDAYVKAEE-GAVDYIARIVELFESVDGEPYF 150
E E+L C Y QA V G ++G ++ ++ G I + +FES D
Sbjct: 592 EGEILGETCAGEPLYGQALVGGRKMDVGGAVILEVDDQGETPLIYFVEYMFESSDNSKKL 651
Query: 151 KARWFYRAEDTVIKDLACLVDRKRVFLSD 179
+ R +TV+ A + + +FL++
Sbjct: 652 HGKLLQRGSETVLGTAA---NERELFLTN 677
>MGI|MGI:94912 [details] [associations]
symbol:Dnmt1 "DNA methyltransferase (cytosine-5) 1"
species:10090 "Mus musculus" [GO:0000792 "heterochromatin"
evidence=IDA] [GO:0003677 "DNA binding" evidence=ISO;IDA]
[GO:0003690 "double-stranded DNA binding" evidence=ISO] [GO:0003723
"RNA binding" evidence=IDA] [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0003886 "DNA (cytosine-5-)-methyltransferase
activity" evidence=ISO;IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005657
"replication fork" evidence=IDA] [GO:0005721 "centromeric
heterochromatin" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0006306 "DNA methylation" evidence=IDA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0008134 "transcription factor binding"
evidence=IEA] [GO:0008152 "metabolic process" evidence=IEA]
[GO:0008168 "methyltransferase activity" evidence=IDA] [GO:0008270
"zinc ion binding" evidence=IDA] [GO:0008327 "methyl-CpG binding"
evidence=ISO;IDA] [GO:0009008 "DNA-methyltransferase activity"
evidence=ISO] [GO:0010216 "maintenance of DNA methylation"
evidence=ISO;IMP] [GO:0010424 "DNA methylation on cytosine within a
CG sequence" evidence=ISO] [GO:0010468 "regulation of gene
expression" evidence=IMP] [GO:0010628 "positive regulation of gene
expression" evidence=ISO] [GO:0016458 "gene silencing"
evidence=IDA] [GO:0016568 "chromatin modification" evidence=IEA]
[GO:0016740 "transferase activity" evidence=IEA] [GO:0019904
"protein domain specific binding" evidence=ISO] [GO:0032259
"methylation" evidence=IEA] [GO:0042127 "regulation of cell
proliferation" evidence=IGI] [GO:0042826 "histone deacetylase
binding" evidence=ISO] [GO:0043234 "protein complex" evidence=ISO]
[GO:0045322 "unmethylated CpG binding" evidence=ISO] [GO:0045892
"negative regulation of transcription, DNA-dependent"
evidence=IMP;IDA] [GO:0046498 "S-adenosylhomocysteine metabolic
process" evidence=ISO] [GO:0046499 "S-adenosylmethioninamine
metabolic process" evidence=ISO] [GO:0046500 "S-adenosylmethionine
metabolic process" evidence=ISO] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0051571 "positive regulation of histone H3-K4
methylation" evidence=ISO] [GO:0051573 "negative regulation of
histone H3-K9 methylation" evidence=ISO] [GO:0051718 "DNA
(cytosine-5-)-methyltransferase activity, acting on CpG substrates"
evidence=ISO] [GO:0071230 "cellular response to amino acid
stimulus" evidence=IDA] [GO:0090116 "C-5 methylation of cytosine"
evidence=IDA] InterPro:IPR001025 InterPro:IPR001525
InterPro:IPR002857 InterPro:IPR010506 InterPro:IPR017198
InterPro:IPR018117 Pfam:PF00145 Pfam:PF01426 Pfam:PF02008
Pfam:PF06464 PIRSF:PIRSF037404 PRINTS:PR00105 PROSITE:PS00094
PROSITE:PS00095 PROSITE:PS51038 PROSITE:PS51058 SMART:SM00439
MGI:MGI:94912 GO:GO:0005634 GO:GO:0005737 GO:GO:0045892
GO:GO:0046872 GO:GO:0008270 GO:GO:0006351 GO:GO:0016568
GO:GO:0003723 GO:GO:0042127 GO:GO:0010628 GO:GO:0005721
GO:GO:0071230 GO:GO:0016458 GO:GO:0005657 GO:GO:0051573
GO:GO:0051571 eggNOG:COG0270 KO:K00558 GO:GO:0003886
PANTHER:PTHR10629 GO:GO:0010216 InterPro:IPR022702 Pfam:PF12047
BRENDA:2.1.1.37 CTD:1786 GeneTree:ENSGT00390000005100
HOVERGEN:HBG051384 OMA:SENWAME OrthoDB:EOG4T1HKN GO:GO:0008327
ChiTaRS:DNMT1 EMBL:X14805 EMBL:AF175432 EMBL:AF162282 EMBL:AF175431
EMBL:AF175412 EMBL:AF175413 EMBL:AF175414 EMBL:AF244089
EMBL:AF244090 EMBL:AF175416 EMBL:AF175417 EMBL:AF175418
EMBL:AF175419 EMBL:AF175420 EMBL:AF175421 EMBL:AF175422
EMBL:AF175423 EMBL:AF234317 EMBL:AF175424 EMBL:AF175425
EMBL:AF175426 EMBL:AF234318 EMBL:AF175427 EMBL:AF175428
EMBL:AF175429 EMBL:AF175430 EMBL:BC048148 EMBL:AF036007
EMBL:AF036008 EMBL:U70051 EMBL:AK013247 IPI:IPI00474974
IPI:IPI00990173 PIR:S01845 RefSeq:NP_001186360.2
RefSeq:NP_001186361.1 RefSeq:NP_001186362.1 RefSeq:NP_034196.5
UniGene:Mm.128580 PDB:3AV4 PDB:3AV5 PDB:3AV6 PDB:3PT6 PDB:3PT9
PDB:4DA4 PDBsum:3AV4 PDBsum:3AV5 PDBsum:3AV6 PDBsum:3PT6
PDBsum:3PT9 PDBsum:4DA4 ProteinModelPortal:P13864 SMR:P13864
IntAct:P13864 STRING:P13864 REBASE:2844 PhosphoSite:P13864
PaxDb:P13864 PRIDE:P13864 Ensembl:ENSMUST00000004202
Ensembl:ENSMUST00000178110 GeneID:13433 KEGG:mmu:13433
UCSC:uc009ojo.2 UCSC:uc009ojq.2 InParanoid:P13864
EvolutionaryTrace:P13864 NextBio:283859 Bgee:P13864
CleanEx:MM_DNMT1 Genevestigator:P13864
GermOnline:ENSMUSG00000004099 Uniprot:P13864
Length = 1620
Score = 293 (108.2 bits), Expect = 1.8e-44, Sum P(4) = 1.8e-44
Identities = 76/252 (30%), Positives = 122/252 (48%)
Query: 440 LPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENV 499
LP GDV+ +CGGPPCQG SG NRF + KN ++ F+ +Y +P++ L+ENV
Sbjct: 1214 LPQKGDVEMLCGGPPCQGFSGMNRFNS--RTYSKFKNSLVVSFLSYCDYYRPRFFLLENV 1271
Query: 500 VDILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYP 559
+ + + + + + LV M YQ G++ AG YG+ Q R R + A P +KLP +P
Sbjct: 1272 RNFVSYRRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRRAIILAAAPGEKLPLFP 1331
Query: 560 LPTHEIVARG----VIPNEFQEII-VAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDE 614
P H R V+ ++ + + + ++ P + + + D +SDLP + N S E
Sbjct: 1332 EPLHVFAPRACQLSVVVDDKKFVSNITRLSSGPFRT---ITVRDTMSDLPEIQNGASNSE 1388
Query: 615 RKYGTVARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRK 674
Y + FQ+ +R + Q R + D P R+ IP
Sbjct: 1389 IPYNGEPLSWFQRQLRGSHY--------QPILRDHICKDMSPLVA-----ARMRHIPLFP 1435
Query: 675 GANFRDLPGVLV 686
G+++RDLP + V
Sbjct: 1436 GSDWRDLPNIQV 1447
Score = 145 (56.1 bits), Expect = 1.8e-44, Sum P(4) = 1.8e-44
Identities = 28/59 (47%), Positives = 39/59 (66%)
Query: 726 FGRLWWDEIVNTVVTRAQPHNRI--LLHPSQDRVLTIRENARLQGFPDCYQLFGPVKER 782
+GRL WD +T VT +P + +LHP Q RV+++RE AR QGFPD Y+ FG + +R
Sbjct: 1516 YGRLEWDGFFSTTVTNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDSYRFFGNILDR 1574
Score = 127 (49.8 bits), Expect = 1.8e-44, Sum P(4) = 1.8e-44
Identities = 38/142 (26%), Positives = 66/142 (46%)
Query: 57 VKKKTQKNKPDSDLFFVSPPVSADEALKRYP--DRYKALNEEEEVLQARCHYTQASVDGC 114
VK+ + D D+ + P + K+ DR L + ++ + R +Y + S+D
Sbjct: 699 VKEADDDEEADDDVSEMPSPKKLHQGKKKKQNKDRISWLGQPMKIEENRTYYQKVSIDEE 758
Query: 115 LYNLGDDAYVKAEEGAVD-YIARIVELFESVDGEPYFKARWFYRAEDTVIKDLACLVDRK 173
+ +GD V ++ + Y+AR+ L+E +G+ F A WF DTV L D
Sbjct: 759 MLEVGDCVSVIPDDSSKPLYLARVTALWEDKNGQMMFHAHWFCAGTDTV---LGATSDPL 815
Query: 174 RVFLSDVEDDNPLNCIVSKAKI 195
+FL ++ L+ I SK K+
Sbjct: 816 ELFLVGECENMQLSYIHSKVKV 837
Score = 92 (37.4 bits), Expect = 1.8e-44, Sum P(4) = 1.8e-44
Identities = 22/67 (32%), Positives = 37/67 (55%)
Query: 260 PEMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKVRNEAA 319
P++ LD++SGCG +S G +G+ T WAI++ A ++ + N+P T V E
Sbjct: 1140 PKLRTLDVFSGCGGLSEGF----HQAGIS-ETLWAIEMWDPAAQAFRLNNPGTTVFTEDC 1194
Query: 320 DDFLSLL 326
+ L L+
Sbjct: 1195 NVLLKLV 1201
Score = 65 (27.9 bits), Expect = 4.6e-38, Sum P(4) = 4.6e-38
Identities = 21/68 (30%), Positives = 32/68 (47%)
Query: 60 KTQKNKPDSDLFFVSPPVSADEALKRYPDRYKALNEEEEVLQARCHYTQASVDGCLYNLG 119
KTQ + + F +S A+ K P K L + EEV R + + + +G +Y LG
Sbjct: 885 KTQPTEDNKHKFCLSCIRLAELRQKEMP---KVLEQIEEV-DGRVYCSSITKNGVVYRLG 940
Query: 120 DDAYVKAE 127
D Y+ E
Sbjct: 941 DSVYLPPE 948
>ZFIN|ZDB-GENE-990714-15 [details] [associations]
symbol:dnmt1 "DNA (cytosine-5-)-methyltransferase 1"
species:7955 "Danio rerio" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0090116 "C-5 methylation of cytosine" evidence=IEA] [GO:0006306
"DNA methylation" evidence=IEA;IMP] [GO:0008168 "methyltransferase
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003886 "DNA
(cytosine-5-)-methyltransferase activity" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=IEA] [GO:0032776 "DNA
methylation on cytosine" evidence=IMP] [GO:0035622 "intrahepatic
bile duct development" evidence=IMP] [GO:0044030 "regulation of DNA
methylation" evidence=IMP] [GO:0031017 "exocrine pancreas
development" evidence=IMP] [GO:0048565 "digestive tract
development" evidence=IMP] [GO:0010842 "retina layer formation"
evidence=IMP] [GO:0051216 "cartilage development" evidence=IMP]
[GO:0002088 "lens development in camera-type eye" evidence=IMP]
[GO:0060042 "retina morphogenesis in camera-type eye" evidence=IMP]
[GO:0051567 "histone H3-K9 methylation" evidence=IMP] [GO:0016740
"transferase activity" evidence=IEA] [GO:0032259 "methylation"
evidence=IEA] InterPro:IPR001025 InterPro:IPR001525
InterPro:IPR002857 InterPro:IPR010506 InterPro:IPR017198
InterPro:IPR018117 Pfam:PF00145 Pfam:PF01426 Pfam:PF02008
Pfam:PF06464 PIRSF:PIRSF037404 PRINTS:PR00105 PROSITE:PS00094
PROSITE:PS00095 PROSITE:PS51038 PROSITE:PS51058 SMART:SM00439
ZFIN:ZDB-GENE-990714-15 GO:GO:0005634 GO:GO:0003677 GO:GO:0008270
GO:GO:0051216 GO:GO:0051567 GO:GO:0010842 GO:GO:0048565
GO:GO:0044030 GO:GO:0032776 GO:GO:0002088 GO:GO:0031017
GO:GO:0003886 PANTHER:PTHR10629 InterPro:IPR022702 Pfam:PF12047
GeneTree:ENSGT00390000005100 OMA:SENWAME GO:GO:0035622
EMBL:CU571160 IPI:IPI00486841 Ensembl:ENSDART00000021977
ArrayExpress:F1RCN0 Bgee:F1RCN0 Uniprot:F1RCN0
Length = 1500
Score = 304 (112.1 bits), Expect = 1.7e-43, Sum P(4) = 1.7e-43
Identities = 84/268 (31%), Positives = 131/268 (48%)
Query: 423 CKEKLKEFVTKGYRSNIL----PLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQ 478
C LK V G ++N L P GDV+ +CGGPPCQG SG NRF + KN
Sbjct: 1075 CNVLLK-LVMSGEKTNSLGQKLPQKGDVEMLCGGPPCQGFSGMNRFNS--RTYSKFKNSL 1131
Query: 479 LLVFMDVIEYLKPKYVLMENVVDILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLP 538
++ ++ +Y +PK+ L+ENV + + F + + + LV M YQ G++ AG YG+
Sbjct: 1132 VVSYLSYCDYYRPKFFLLENVRNFVSFKRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVA 1191
Query: 539 QFRLRVFLWGARPFKKLPQYPLPTHEIVARG----VIPNEFQEIIVAYANNQPCQLEKGV 594
Q R R + A P +KLP+YP P H R V +E + + N + + +
Sbjct: 1192 QTRRRAIILAAAPGEKLPRYPEPLHVFAPRACSLSVAVDEKKYVSNVTRGNGG--IYRTI 1249
Query: 595 LLSDAISDLPLVTNNESEDERKYGTVARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDH 654
+ D +SDLP + N + E Y ++ FQ+ IR ++ +P +L DH
Sbjct: 1250 TVRDTMSDLPEIRNGAAALEISYNGEPQSWFQRQIRGSQY------------QP-ILRDH 1296
Query: 655 RPFQVNNDDYERVCCIPKRKGANFRDLP 682
++ R+ IP G+++RDLP
Sbjct: 1297 ICKDMSALVAARMRNIPLAPGSDWRDLP 1324
Score = 143 (55.4 bits), Expect = 1.7e-43, Sum P(4) = 1.7e-43
Identities = 28/59 (47%), Positives = 39/59 (66%)
Query: 726 FGRLWWDEIVNTVVTRAQPHNRI--LLHPSQDRVLTIRENARLQGFPDCYQLFGPVKER 782
+GRL WD +T VT +P + +LHP Q RV+++RE AR QGFPD Y+ FG V ++
Sbjct: 1397 YGRLEWDGFFSTTVTNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDTYRFFGNVLDK 1455
Score = 103 (41.3 bits), Expect = 1.7e-43, Sum P(4) = 1.7e-43
Identities = 37/143 (25%), Positives = 66/143 (46%)
Query: 57 VKK-KTQKNKPDSDLFFVSPPVSADEALKRYPDRYKA--LNEEEEVLQARCHYTQASVDG 113
VK+ + +N + D+ V + K+ + K + E + + +Y + V+
Sbjct: 575 VKEAEDDENMDEEDVLPVKDTKKMSQTKKKKQTKNKISWVGEPLKTEGKKEYYMKVRVEN 634
Query: 114 CLYNLGDDAYVKAEEGAVD-YIARIVELFESVDGEPYFKARWFYRAEDTVIKDLACLVDR 172
+ +GD V ++ + Y+ARI L++ DGE F A WF R DTV+ + + D
Sbjct: 635 EVLEVGDCVSVSPDDPSHPLYLARITALWD--DGEKMFHAHWFCRGTDTVLGESS---DP 689
Query: 173 KRVFLSDVEDDNPLNCIVSKAKI 195
+FL D +D L+ I K +
Sbjct: 690 LELFLVDECEDMQLSFIHGKVNV 712
Score = 95 (38.5 bits), Expect = 1.7e-43, Sum P(4) = 1.7e-43
Identities = 23/72 (31%), Positives = 38/72 (52%)
Query: 260 PEMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKVRNEAA 319
P++ LD++SGCG +S G +G+ T WAI++ A ++ + N+P T V E
Sbjct: 1021 PKLRTLDVFSGCGGLSEGF----HQAGIS-ETHWAIEMWDPAAQAFRLNNPGTTVFTEDC 1075
Query: 320 DDFLSLLKEWAK 331
+ L L+ K
Sbjct: 1076 NVLLKLVMSGEK 1087
Score = 52 (23.4 bits), Expect = 3.1e-38, Sum P(4) = 3.1e-38
Identities = 13/50 (26%), Positives = 24/50 (48%)
Query: 87 PDRYKALNEEEEVLQARCHYTQASVDGCLYNLGDDAYVKAEEGAVDYIAR 136
P Y+ L +EE ++ Y + G Y +GD Y+ E A +++ +
Sbjct: 786 PHAYEPLEDEES--DSKVFYGLVNYKGEQYKVGDSVYLPPE--AFNFVVK 831
Score = 48 (22.0 bits), Expect = 2.6e-05, Sum P(2) = 2.6e-05
Identities = 24/90 (26%), Positives = 37/90 (41%)
Query: 648 PSLLYDHRP--FQVNNDDYERVCCIPKRKGANFR--DLPGVLVGPDNKVRWDPSMERVML 703
P +L D R F N D +E +P+ K NF D G L D+ + + ++E
Sbjct: 259 PEMLTDERLSLFDSNEDGFESYEDLPQHKITNFSVYDKRGHLCPFDSGLI-EKNVELYFS 317
Query: 704 KSGKPLVPDYAMKFEHQSSTKPFGRL--WW 731
+ KP+ D + K G + WW
Sbjct: 318 CAVKPIYDDNPC-MDGGVPAKKLGPINAWW 346
>UNIPROTKB|F1S3I5 [details] [associations]
symbol:DNMT1 "Cytosine-specific methyltransferase"
species:9823 "Sus scrofa" [GO:0071230 "cellular response to amino
acid stimulus" evidence=IEA] [GO:0051573 "negative regulation of
histone H3-K9 methylation" evidence=IEA] [GO:0051571 "positive
regulation of histone H3-K4 methylation" evidence=IEA] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0042127 "regulation of cell proliferation" evidence=IEA]
[GO:0016458 "gene silencing" evidence=IEA] [GO:0010628 "positive
regulation of gene expression" evidence=IEA] [GO:0010216
"maintenance of DNA methylation" evidence=IEA] [GO:0008327
"methyl-CpG binding" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005721 "centromeric heterochromatin"
evidence=IEA] [GO:0005657 "replication fork" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0003886 "DNA (cytosine-5-)-methyltransferase
activity" evidence=IEA] [GO:0008134 "transcription factor binding"
evidence=IEA] InterPro:IPR001025 InterPro:IPR001525
InterPro:IPR002857 InterPro:IPR010506 InterPro:IPR017198
InterPro:IPR018117 Pfam:PF00145 Pfam:PF01426 Pfam:PF02008
Pfam:PF06464 PIRSF:PIRSF037404 PRINTS:PR00105 PROSITE:PS00094
PROSITE:PS00095 PROSITE:PS51038 PROSITE:PS51058 SMART:SM00439
GO:GO:0005634 GO:GO:0045892 GO:GO:0008270 GO:GO:0003723
GO:GO:0042127 GO:GO:0010628 GO:GO:0005721 GO:GO:0071230
GO:GO:0016458 GO:GO:0005657 GO:GO:0051573 GO:GO:0051571
GO:GO:0003886 PANTHER:PTHR10629 GO:GO:0010216 InterPro:IPR022702
Pfam:PF12047 GeneTree:ENSGT00390000005100 OMA:SENWAME GO:GO:0008327
EMBL:CU462940 Ensembl:ENSSSCT00000014923 Uniprot:F1S3I5
Length = 1611
Score = 302 (111.4 bits), Expect = 6.6e-43, Sum P(4) = 6.6e-43
Identities = 78/256 (30%), Positives = 128/256 (50%)
Query: 436 RSNILPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVL 495
R LP GDV+ +CGGPPCQG SG NRF + KN ++ F+ +Y +P+Y L
Sbjct: 1203 RGQKLPQKGDVEMLCGGPPCQGFSGMNRFNS--RTYSKFKNSLVVSFLSYCDYYRPRYFL 1260
Query: 496 MENVVDILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKL 555
+ENV + + F + + + LV M YQ G++ AG YG+ Q R R + A P ++L
Sbjct: 1261 LENVRNFVSFKRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRRAIILAAAPGEQL 1320
Query: 556 PQYPLPTHEIVARG----VIPNEFQEII-VAYANNQPCQLEKGVLLSDAISDLPLVTNNE 610
P +P P H R V+ ++ + + + ++ P + + + D +SDLP + N
Sbjct: 1321 PLFPEPLHVFAPRACQLSVVVDDKKFVSNITRLSSGPFRT---ITVRDTMSDLPEIRNGA 1377
Query: 611 SEDERKYGTVARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCI 670
S E Y ++ FQ+ +R ++ +P +L DH ++ R+ I
Sbjct: 1378 SAQEISYNGEPQSWFQRQLRGSQY------------QP-ILRDHICKDMSALVAARMRHI 1424
Query: 671 PKRKGANFRDLPGVLV 686
P G+++RDLP + V
Sbjct: 1425 PLAPGSDWRDLPNIEV 1440
Score = 146 (56.5 bits), Expect = 6.6e-43, Sum P(4) = 6.6e-43
Identities = 28/59 (47%), Positives = 40/59 (67%)
Query: 726 FGRLWWDEIVNTVVTRAQPHNRI--LLHPSQDRVLTIRENARLQGFPDCYQLFGPVKER 782
+GRL WD +T VT +P + +LHP Q RV+++RE AR QGFPD Y+LFG + ++
Sbjct: 1510 YGRLEWDGFFSTTVTNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDTYRLFGNILDK 1568
Score = 105 (42.0 bits), Expect = 6.6e-43, Sum P(4) = 6.6e-43
Identities = 32/113 (28%), Positives = 50/113 (44%)
Query: 84 KRYPDRYKALNEEEEVLQARCHYTQASVDGCLYNLGDDAYVKAEEGAVD-YIARIVELFE 142
K+ DR + E + + +Y + +D +GD V ++ + Y+AR+ L+E
Sbjct: 721 KQNKDRISWIGEAVKTDGKKIYYKKVCIDSETLEVGDCVSVIPDDSSKPLYLARVTALWE 780
Query: 143 SVDGEPYFKARWFYRAEDTVIKDLACLVDRKRVFLSDVEDDNPLNCIVSKAKI 195
F A WF DTV L D +FL D +D L+ I SK K+
Sbjct: 781 DSSNGQMFHAHWFCAGIDTV---LGATSDPLELFLVDECEDMQLSYIHSKVKV 830
Score = 88 (36.0 bits), Expect = 6.6e-43, Sum P(4) = 6.6e-43
Identities = 21/67 (31%), Positives = 37/67 (55%)
Query: 260 PEMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKVRNEAA 319
P++ LD++SGCG +S G +G+ T WAI++ A ++ + N+P + V E
Sbjct: 1133 PKLRTLDVFSGCGGLSEGF----HQAGIS-ETLWAIEMWDPAAQAFRLNNPGSTVFTEDC 1187
Query: 320 DDFLSLL 326
+ L L+
Sbjct: 1188 NVLLKLV 1194
Score = 64 (27.6 bits), Expect = 1.1e-38, Sum P(4) = 1.1e-38
Identities = 21/68 (30%), Positives = 31/68 (45%)
Query: 60 KTQKNKPDSDLFFVSPPVSADEALKRYPDRYKALNEEEEVLQARCHYTQASVDGCLYNLG 119
KTQ + + F VS A+ K P + E+ E L R Y+ A+ +G Y +G
Sbjct: 877 KTQPTEDNKFKFCVSCARLAEMRQKEVP----RVMEQLEDLDGRVLYSSATKNGIQYRVG 932
Query: 120 DDAYVKAE 127
D Y+ E
Sbjct: 933 DGVYLPPE 940
Score = 47 (21.6 bits), Expect = 1.8e-05, Sum P(2) = 1.8e-05
Identities = 13/42 (30%), Positives = 18/42 (42%)
Query: 686 VGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFG 727
V P + D E+ + K L P +K E ST+P G
Sbjct: 226 VRPGTHMEEDDKEEKRLRSQTKELTPKQKIKEELDRSTRPGG 267
Score = 37 (18.1 bits), Expect = 6.9e-36, Sum P(4) = 6.9e-36
Identities = 11/30 (36%), Positives = 14/30 (46%)
Query: 126 AEEGAVDYIARIVELFESVDGEPYFKARWF 155
A EG +D A L DG+ YF W+
Sbjct: 840 ALEGGMDPEA----LMSKDDGKTYFYQLWY 865
>UNIPROTKB|P26358 [details] [associations]
symbol:DNMT1 "DNA (cytosine-5)-methyltransferase 1"
species:9606 "Homo sapiens" [GO:0008134 "transcription factor
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0016568 "chromatin modification" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0005657 "replication
fork" evidence=IEA] [GO:0005721 "centromeric heterochromatin"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0008327 "methyl-CpG binding" evidence=IEA] [GO:0016458 "gene
silencing" evidence=IEA] [GO:0042127 "regulation of cell
proliferation" evidence=IEA] [GO:0071230 "cellular response to
amino acid stimulus" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0010628 "positive regulation of gene expression" evidence=IMP]
[GO:0051573 "negative regulation of histone H3-K9 methylation"
evidence=IMP] [GO:0051571 "positive regulation of histone H3-K4
methylation" evidence=IMP] [GO:0010216 "maintenance of DNA
methylation" evidence=IDA] [GO:0003677 "DNA binding" evidence=IDA]
[GO:0009008 "DNA-methyltransferase activity" evidence=IDA]
[GO:0003886 "DNA (cytosine-5-)-methyltransferase activity"
evidence=IDA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=TAS] [GO:0006306 "DNA
methylation" evidence=TAS] InterPro:IPR001025 InterPro:IPR001525
InterPro:IPR002857 InterPro:IPR010506 InterPro:IPR017198
InterPro:IPR018117 Pfam:PF00145 Pfam:PF01426 Pfam:PF02008
Pfam:PF06464 PIRSF:PIRSF037404 PRINTS:PR00105 PROSITE:PS00094
PROSITE:PS00095 PROSITE:PS51038 PROSITE:PS51058 SMART:SM00439
GO:GO:0005634 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
GO:GO:0006351 GO:GO:0016568 GO:GO:0003723 GO:GO:0042127
GO:GO:0000122 GO:GO:0010628 GO:GO:0005721 GO:GO:0071230
GO:GO:0016458 Orphanet:36386 GO:GO:0005657 GO:GO:0051573
GO:GO:0051571 EMBL:AC020931 DrugBank:DB00928 DrugBank:DB01035
eggNOG:COG0270 KO:K00558 GO:GO:0003886 PANTHER:PTHR10629
DrugBank:DB01181 GO:GO:0010216 DrugBank:DB01262 InterPro:IPR022702
Pfam:PF12047 BRENDA:2.1.1.37 CTD:1786 HOGENOM:HOG000082497
HOVERGEN:HBG051384 OMA:SENWAME OrthoDB:EOG4T1HKN GO:GO:0008327
EMBL:X63692 EMBL:AF180682 EMBL:AC010077 EMBL:AC011511 EMBL:BC126227
EMBL:BC144093 EMBL:AH008119 IPI:IPI00031519 IPI:IPI00220918
IPI:IPI00220919 PIR:S22610 RefSeq:NP_001124295.1 RefSeq:NP_001370.1
UniGene:Hs.202672 PDB:3EPZ PDB:3PTA PDB:3SWR PDBsum:3EPZ
PDBsum:3PTA PDBsum:3SWR ProteinModelPortal:P26358 SMR:P26358
DIP:DIP-39693N IntAct:P26358 MINT:MINT-232346 STRING:P26358
REBASE:1161 PhosphoSite:P26358 DMDM:12231019 PaxDb:P26358
PRIDE:P26358 Ensembl:ENST00000340748 Ensembl:ENST00000359526
GeneID:1786 KEGG:hsa:1786 UCSC:uc002mng.3 UCSC:uc002mnh.3
GeneCards:GC19M010244 HGNC:HGNC:2976 HPA:CAB005876 HPA:HPA002694
MIM:126375 MIM:614116 neXtProt:NX_P26358 PharmGKB:PA27443
BindingDB:P26358 ChEMBL:CHEMBL1993 ChiTaRS:DNMT1 DrugBank:DB01099
EvolutionaryTrace:P26358 GenomeRNAi:1786 NextBio:7267
ArrayExpress:P26358 Bgee:P26358 CleanEx:HS_DNMT1
Genevestigator:P26358 GermOnline:ENSG00000130816 Uniprot:P26358
Length = 1616
Score = 304 (112.1 bits), Expect = 1.3e-42, Sum P(4) = 1.3e-42
Identities = 82/260 (31%), Positives = 129/260 (49%)
Query: 432 TKGYRSNILPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKP 491
T R LP GDV+ +CGGPPCQG SG NRF + KN ++ F+ +Y +P
Sbjct: 1203 TTNSRGQRLPQKGDVEMLCGGPPCQGFSGMNRFNS--RTYSKFKNSLVVSFLSYCDYYRP 1260
Query: 492 KYVLMENVVDILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARP 551
++ L+ENV + + F + + + LV M YQ G++ AG YG+ Q R R + A P
Sbjct: 1261 RFFLLENVRNFVSFKRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRRAIILAAAP 1320
Query: 552 FKKLPQYPLPTHEIVARG----VIPNEFQEII-VAYANNQPCQLEKGVLLSDAISDLPLV 606
+KLP +P P H R V+ ++ + + + ++ P + + + D +SDLP V
Sbjct: 1321 GEKLPLFPEPLHVFAPRACQLSVVVDDKKFVSNITRLSSGPFRT---ITVRDTMSDLPEV 1377
Query: 607 TNNESEDERKYGTVARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYER 666
N S E Y ++ FQ+ +R AQ +P +L DH ++ R
Sbjct: 1378 RNGASALEISYNGEPQSWFQRQLR----------GAQY--QP-ILRDHICKDMSALVAAR 1424
Query: 667 VCCIPKRKGANFRDLPGVLV 686
+ IP G+++RDLP + V
Sbjct: 1425 MRHIPLAPGSDWRDLPNIEV 1444
Score = 146 (56.5 bits), Expect = 1.3e-42, Sum P(4) = 1.3e-42
Identities = 28/59 (47%), Positives = 40/59 (67%)
Query: 726 FGRLWWDEIVNTVVTRAQPHNRI--LLHPSQDRVLTIRENARLQGFPDCYQLFGPVKER 782
+GRL WD +T VT +P + +LHP Q RV+++RE AR QGFPD Y+LFG + ++
Sbjct: 1514 YGRLEWDGFFSTTVTNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDTYRLFGNILDK 1572
Score = 101 (40.6 bits), Expect = 1.3e-42, Sum P(4) = 1.3e-42
Identities = 31/113 (27%), Positives = 50/113 (44%)
Query: 84 KRYPDRYKALNEEEEVLQARCHYTQASVDGCLYNLGDDAYVKAEEGAVD-YIARIVELFE 142
K+ +R + E + + +Y + +D +GD V ++ + Y+AR+ L+E
Sbjct: 725 KQNKNRISWVGEAVKTDGKKSYYKKVCIDAETLEVGDCVSVIPDDSSKPLYLARVTALWE 784
Query: 143 SVDGEPYFKARWFYRAEDTVIKDLACLVDRKRVFLSDVEDDNPLNCIVSKAKI 195
F A WF DTV L D +FL D +D L+ I SK K+
Sbjct: 785 DSSNGQMFHAHWFCAGTDTV---LGATSDPLELFLVDECEDMQLSYIHSKVKV 834
Score = 87 (35.7 bits), Expect = 1.3e-42, Sum P(4) = 1.3e-42
Identities = 22/67 (32%), Positives = 37/67 (55%)
Query: 260 PEMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKVRNEAA 319
P++ LD++SGCG +S G A +S T WAI++ A ++ + N+P + V E
Sbjct: 1137 PKLRTLDVFSGCGGLSEGFH-QAGISD----TLWAIEMWDPAAQAFRLNNPGSTVFTEDC 1191
Query: 320 DDFLSLL 326
+ L L+
Sbjct: 1192 NILLKLV 1198
Score = 69 (29.3 bits), Expect = 2.6e-39, Sum P(4) = 2.6e-39
Identities = 22/68 (32%), Positives = 33/68 (48%)
Query: 60 KTQKNKPDSDLFFVSPPVSADEALKRYPDRYKALNEEEEVLQARCHYTQASVDGCLYNLG 119
KTQ + + F VS A+ K P + L + E+ L +R Y A+ +G LY +G
Sbjct: 881 KTQPTEDNKFKFCVSCARLAEMRQKEIP---RVLEQLED-LDSRVLYYSATKNGILYRVG 936
Query: 120 DDAYVKAE 127
D Y+ E
Sbjct: 937 DGVYLPPE 944
Score = 44 (20.5 bits), Expect = 3.6e-38, Sum P(4) = 3.6e-38
Identities = 11/28 (39%), Positives = 13/28 (46%)
Query: 390 PNKTKKPGVYFKVRWKGYG-PSEDTWEP 416
PN + PG K + KG G P EP
Sbjct: 1100 PNHARSPGNKGKGKGKGKGKPKSQACEP 1127
Score = 40 (19.1 bits), Expect = 2.6e-36, Sum P(4) = 2.6e-36
Identities = 7/16 (43%), Positives = 9/16 (56%)
Query: 140 LFESVDGEPYFKARWF 155
L E DG+ YF W+
Sbjct: 854 LLEGDDGKTYFYQLWY 869
>UNIPROTKB|F5GX68 [details] [associations]
symbol:DNMT1 "Cytosine-specific methyltransferase"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0008134 "transcription
factor binding" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003886 "DNA (cytosine-5-)-methyltransferase
activity" evidence=IEA] InterPro:IPR001025 InterPro:IPR001525
InterPro:IPR002857 InterPro:IPR010506 InterPro:IPR017198
InterPro:IPR018117 Pfam:PF00145 Pfam:PF01426 Pfam:PF02008
Pfam:PF06464 PIRSF:PIRSF037404 PRINTS:PR00105 PROSITE:PS00094
PROSITE:PS00095 PROSITE:PS51038 PROSITE:PS51058 SMART:SM00439
GO:GO:0005634 GO:GO:0003677 GO:GO:0008270 EMBL:AC020931
GO:GO:0003886 PANTHER:PTHR10629 InterPro:IPR022702 Pfam:PF12047
EMBL:AC010077 EMBL:AC011511 HGNC:HGNC:2976 ChiTaRS:DNMT1
IPI:IPI01011182 ProteinModelPortal:F5GX68 SMR:F5GX68 PRIDE:F5GX68
Ensembl:ENST00000540357 UCSC:uc010xld.2 ArrayExpress:F5GX68
Bgee:F5GX68 Uniprot:F5GX68
Length = 1619
Score = 304 (112.1 bits), Expect = 1.3e-42, Sum P(4) = 1.3e-42
Identities = 82/260 (31%), Positives = 129/260 (49%)
Query: 432 TKGYRSNILPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKP 491
T R LP GDV+ +CGGPPCQG SG NRF + KN ++ F+ +Y +P
Sbjct: 1203 TTNSRGQRLPQKGDVEMLCGGPPCQGFSGMNRFNS--RTYSKFKNSLVVSFLSYCDYYRP 1260
Query: 492 KYVLMENVVDILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARP 551
++ L+ENV + + F + + + LV M YQ G++ AG YG+ Q R R + A P
Sbjct: 1261 RFFLLENVRNFVSFKRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRRAIILAAAP 1320
Query: 552 FKKLPQYPLPTHEIVARG----VIPNEFQEII-VAYANNQPCQLEKGVLLSDAISDLPLV 606
+KLP +P P H R V+ ++ + + + ++ P + + + D +SDLP V
Sbjct: 1321 GEKLPLFPEPLHVFAPRACQLSVVVDDKKFVSNITRLSSGPFRT---ITVRDTMSDLPEV 1377
Query: 607 TNNESEDERKYGTVARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYER 666
N S E Y ++ FQ+ +R AQ +P +L DH ++ R
Sbjct: 1378 RNGASALEISYNGEPQSWFQRQLR----------GAQY--QP-ILRDHICKDMSALVAAR 1424
Query: 667 VCCIPKRKGANFRDLPGVLV 686
+ IP G+++RDLP + V
Sbjct: 1425 MRHIPLAPGSDWRDLPNIEV 1444
Score = 146 (56.5 bits), Expect = 1.3e-42, Sum P(4) = 1.3e-42
Identities = 28/59 (47%), Positives = 40/59 (67%)
Query: 726 FGRLWWDEIVNTVVTRAQPHNRI--LLHPSQDRVLTIRENARLQGFPDCYQLFGPVKER 782
+GRL WD +T VT +P + +LHP Q RV+++RE AR QGFPD Y+LFG + ++
Sbjct: 1517 YGRLEWDGFFSTTVTNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDTYRLFGNILDK 1575
Score = 101 (40.6 bits), Expect = 1.3e-42, Sum P(4) = 1.3e-42
Identities = 31/113 (27%), Positives = 50/113 (44%)
Query: 84 KRYPDRYKALNEEEEVLQARCHYTQASVDGCLYNLGDDAYVKAEEGAVD-YIARIVELFE 142
K+ +R + E + + +Y + +D +GD V ++ + Y+AR+ L+E
Sbjct: 725 KQNKNRISWVGEAVKTDGKKSYYKKVCIDAETLEVGDCVSVIPDDSSKPLYLARVTALWE 784
Query: 143 SVDGEPYFKARWFYRAEDTVIKDLACLVDRKRVFLSDVEDDNPLNCIVSKAKI 195
F A WF DTV L D +FL D +D L+ I SK K+
Sbjct: 785 DSSNGQMFHAHWFCAGTDTV---LGATSDPLELFLVDECEDMQLSYIHSKVKV 834
Score = 87 (35.7 bits), Expect = 1.3e-42, Sum P(4) = 1.3e-42
Identities = 22/67 (32%), Positives = 37/67 (55%)
Query: 260 PEMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKVRNEAA 319
P++ LD++SGCG +S G A +S T WAI++ A ++ + N+P + V E
Sbjct: 1137 PKLRTLDVFSGCGGLSEGFH-QAGISD----TLWAIEMWDPAAQAFRLNNPGSTVFTEDC 1191
Query: 320 DDFLSLL 326
+ L L+
Sbjct: 1192 NILLKLV 1198
Score = 69 (29.3 bits), Expect = 2.7e-39, Sum P(4) = 2.7e-39
Identities = 22/68 (32%), Positives = 33/68 (48%)
Query: 60 KTQKNKPDSDLFFVSPPVSADEALKRYPDRYKALNEEEEVLQARCHYTQASVDGCLYNLG 119
KTQ + + F VS A+ K P + L + E+ L +R Y A+ +G LY +G
Sbjct: 881 KTQPTEDNKFKFCVSCARLAEMRQKEIP---RVLEQLED-LDSRVLYYSATKNGILYRVG 936
Query: 120 DDAYVKAE 127
D Y+ E
Sbjct: 937 DGVYLPPE 944
Score = 44 (20.5 bits), Expect = 3.6e-38, Sum P(4) = 3.6e-38
Identities = 11/28 (39%), Positives = 13/28 (46%)
Query: 390 PNKTKKPGVYFKVRWKGYG-PSEDTWEP 416
PN + PG K + KG G P EP
Sbjct: 1100 PNHARSPGNKGKGKGKGKGKPKSQACEP 1127
Score = 40 (19.1 bits), Expect = 2.6e-36, Sum P(4) = 2.6e-36
Identities = 7/16 (43%), Positives = 9/16 (56%)
Query: 140 LFESVDGEPYFKARWF 155
L E DG+ YF W+
Sbjct: 854 LLEGDDGKTYFYQLWY 869
>RGD|620979 [details] [associations]
symbol:Dnmt1 "DNA (cytosine-5-)-methyltransferase 1"
species:10116 "Rattus norvegicus" [GO:0000792 "heterochromatin"
evidence=ISO] [GO:0003677 "DNA binding" evidence=IEA;ISO]
[GO:0003690 "double-stranded DNA binding" evidence=IDA] [GO:0003723
"RNA binding" evidence=ISO] [GO:0003886 "DNA
(cytosine-5-)-methyltransferase activity" evidence=IEA;IGI;ISO;IDA]
[GO:0005634 "nucleus" evidence=IEA;ISO;IDA] [GO:0005657
"replication fork" evidence=ISO] [GO:0005721 "centromeric
heterochromatin" evidence=ISO] [GO:0006306 "DNA methylation"
evidence=ISO;TAS] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0008134 "transcription factor
binding" evidence=IEA] [GO:0008168 "methyltransferase activity"
evidence=ISO] [GO:0008270 "zinc ion binding" evidence=IEA;ISO]
[GO:0008327 "methyl-CpG binding" evidence=ISO;IDA] [GO:0008757
"S-adenosylmethionine-dependent methyltransferase activity"
evidence=TAS] [GO:0009008 "DNA-methyltransferase activity"
evidence=ISO] [GO:0010216 "maintenance of DNA methylation"
evidence=ISO;IDA] [GO:0010424 "DNA methylation on cytosine within a
CG sequence" evidence=IDA] [GO:0010468 "regulation of gene
expression" evidence=ISO] [GO:0010628 "positive regulation of gene
expression" evidence=ISO] [GO:0016458 "gene silencing"
evidence=ISO] [GO:0016568 "chromatin modification" evidence=IEA]
[GO:0019904 "protein domain specific binding" evidence=IPI]
[GO:0042127 "regulation of cell proliferation" evidence=ISO]
[GO:0042826 "histone deacetylase binding" evidence=IPI] [GO:0043234
"protein complex" evidence=IDA] [GO:0045322 "unmethylated CpG
binding" evidence=IDA] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0046498
"S-adenosylhomocysteine metabolic process" evidence=IDA]
[GO:0046499 "S-adenosylmethioninamine metabolic process"
evidence=IDA] [GO:0046500 "S-adenosylmethionine metabolic process"
evidence=IDA] [GO:0051571 "positive regulation of histone H3-K4
methylation" evidence=ISO] [GO:0051573 "negative regulation of
histone H3-K9 methylation" evidence=ISO] [GO:0051718 "DNA
(cytosine-5-)-methyltransferase activity, acting on CpG substrates"
evidence=IDA] [GO:0071230 "cellular response to amino acid
stimulus" evidence=ISO] [GO:0090116 "C-5 methylation of cytosine"
evidence=ISO] InterPro:IPR001025 InterPro:IPR001525
InterPro:IPR002857 InterPro:IPR010506 InterPro:IPR017198
InterPro:IPR018117 Pfam:PF00145 Pfam:PF01426 Pfam:PF02008
Pfam:PF06464 PIRSF:PIRSF037404 PRINTS:PR00105 PROSITE:PS00094
PROSITE:PS00095 PROSITE:PS51038 PROSITE:PS51058 SMART:SM00439
RGD:620979 GO:GO:0005634 GO:GO:0043234 GO:GO:0006355 GO:GO:0046872
GO:GO:0008270 GO:GO:0006351 GO:GO:0016568 GO:GO:0003690
GO:GO:0046500 eggNOG:COG0270 PANTHER:PTHR10629 GO:GO:0046498
GO:GO:0010216 GO:GO:0045322 GO:GO:0010424 InterPro:IPR022702
Pfam:PF12047 GO:GO:0051718 GO:GO:0046499 HOGENOM:HOG000082497
HOVERGEN:HBG051384 GO:GO:0008327 EMBL:AB012214 EMBL:AF116344
EMBL:AF116345 EMBL:D64060 EMBL:AH007612 IPI:IPI00231930
IPI:IPI00231931 IPI:IPI00231933 IPI:IPI00231934 IPI:IPI00231935
IPI:IPI00231936 IPI:IPI00231937 IPI:IPI00231938 IPI:IPI00327802
PIR:JE0378 UniGene:Rn.6955 ProteinModelPortal:Q9Z330 IntAct:Q9Z330
STRING:Q9Z330 REBASE:3019 PhosphoSite:Q9Z330 PRIDE:Q9Z330
UCSC:RGD:620979 BioCyc:MetaCyc:MONOMER-8581 ArrayExpress:Q9Z330
Genevestigator:Q9Z330 Uniprot:Q9Z330
Length = 1622
Score = 281 (104.0 bits), Expect = 1.7e-42, Sum P(4) = 1.7e-42
Identities = 78/254 (30%), Positives = 126/254 (49%)
Query: 440 LPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENV 499
LP GDV+ +CGGPPCQG SG NRF + KN ++ F+ +Y +P++ L+ENV
Sbjct: 1216 LPQKGDVEMLCGGPPCQGFSGMNRFNS--RTYSKFKNSLVVSFLSYCDYYRPRFFLLENV 1273
Query: 500 VDILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYP 559
+ + F + + + LV M YQ G++ AG YG+ Q R R + A P +KLP +P
Sbjct: 1274 RNFVSFRRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRRAIILAAAPGEKLPLFP 1333
Query: 560 LPTHEIVARG----VIPNEFQEII-VAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDE 614
P H R V+ ++ + + + ++ P + + + D +SDLP + N S E
Sbjct: 1334 EPLHVFAPRACQLSVVVDDKKFVSNITRLSSGPFRT---ITMRDTMSDLPEIQNGASAPE 1390
Query: 615 RKYGTVARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPF-QVNNDDYE-RVCCIPK 672
Y K+ R V+ +A + P+ + P+ QV+ R+ IP
Sbjct: 1391 ISY---------KW----RATVLVPEAAARVALPA--HPQGPYPQVHERAGGCRMRHIPL 1435
Query: 673 RKGANFRDLPGVLV 686
G+++RDLP + V
Sbjct: 1436 SPGSDWRDLPNIQV 1449
Score = 149 (57.5 bits), Expect = 1.7e-42, Sum P(4) = 1.7e-42
Identities = 29/59 (49%), Positives = 40/59 (67%)
Query: 726 FGRLWWDEIVNTVVTRAQPHNRI--LLHPSQDRVLTIRENARLQGFPDCYQLFGPVKER 782
+GRL WD +T VT +P + +LHP Q RV+++RE AR QGFPD Y+LFG + +R
Sbjct: 1518 YGRLEWDGFFSTTVTNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDTYRLFGNILDR 1576
Score = 118 (46.6 bits), Expect = 1.7e-42, Sum P(4) = 1.7e-42
Identities = 39/142 (27%), Positives = 66/142 (46%)
Query: 57 VKKKTQKNKPDSDLFFVSPPVSADEALKRYP--DRYKALNEEEEVLQARCHYTQASVDGC 114
VK+ + + D D+ + P + K+ DR L E ++ + R +Y + S+D
Sbjct: 700 VKEADEDEEADDDIPELPSPKKLHQGKKKKQNKDRISWLGEPVKIEENRTYYWKVSIDEE 759
Query: 115 LYNLGDDAYVKAEEGAVD-YIARIVELFESVDGEPYFKARWFYRAEDTVIKDLACLVDRK 173
+GD V ++ + Y+AR+ L+E +G+ F A WF DTV L D
Sbjct: 760 TLEVGDCVSVIPDDPSKPLYLARVTALWEDKNGQ-MFHAHWFCAGTDTV---LGATSDPL 815
Query: 174 RVFLSDVEDDNPLNCIVSKAKI 195
+FL ++ L+ I SK K+
Sbjct: 816 ELFLVGECENMQLSYIHSKVKV 837
Score = 91 (37.1 bits), Expect = 1.7e-42, Sum P(4) = 1.7e-42
Identities = 23/67 (34%), Positives = 37/67 (55%)
Query: 260 PEMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKVRNEAA 319
P++ LD++SGCG GL G +G+ T WAI++ A ++ + N+P T V E
Sbjct: 1142 PKLRTLDVFSGCG----GLTEGFHQAGIS-ETLWAIEMWEPAAQAFRLNNPGTTVFTEDC 1196
Query: 320 DDFLSLL 326
+ L L+
Sbjct: 1197 NVLLKLV 1203
Score = 63 (27.2 bits), Expect = 8.0e-37, Sum P(4) = 8.0e-37
Identities = 21/68 (30%), Positives = 32/68 (47%)
Query: 60 KTQKNKPDSDLFFVSPPVSADEALKRYPDRYKALNEEEEVLQARCHYTQASVDGCLYNLG 119
KTQ + + F +S A+ K P K L + EEV R + + + +G +Y LG
Sbjct: 885 KTQPAEDNKHKFCLSCIRLAELRQKEMP---KVLEQLEEV-DGRVYCSSITKNGVVYRLG 940
Query: 120 DDAYVKAE 127
D Y+ E
Sbjct: 941 DSVYLPPE 948
>UNIPROTKB|Q9Z330 [details] [associations]
symbol:Dnmt1 "DNA (cytosine-5)-methyltransferase 1"
species:10116 "Rattus norvegicus" [GO:0008134 "transcription factor
binding" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001025 InterPro:IPR001525 InterPro:IPR002857
InterPro:IPR010506 InterPro:IPR017198 InterPro:IPR018117
Pfam:PF00145 Pfam:PF01426 Pfam:PF02008 Pfam:PF06464
PIRSF:PIRSF037404 PRINTS:PR00105 PROSITE:PS00094 PROSITE:PS00095
PROSITE:PS51038 PROSITE:PS51058 SMART:SM00439 RGD:620979
GO:GO:0005634 GO:GO:0043234 GO:GO:0006355 GO:GO:0046872
GO:GO:0008270 GO:GO:0006351 GO:GO:0016568 GO:GO:0003690
GO:GO:0046500 eggNOG:COG0270 PANTHER:PTHR10629 GO:GO:0046498
GO:GO:0010216 GO:GO:0045322 GO:GO:0010424 InterPro:IPR022702
Pfam:PF12047 GO:GO:0051718 GO:GO:0046499 HOGENOM:HOG000082497
HOVERGEN:HBG051384 GO:GO:0008327 EMBL:AB012214 EMBL:AF116344
EMBL:AF116345 EMBL:D64060 EMBL:AH007612 IPI:IPI00231930
IPI:IPI00231931 IPI:IPI00231933 IPI:IPI00231934 IPI:IPI00231935
IPI:IPI00231936 IPI:IPI00231937 IPI:IPI00231938 IPI:IPI00327802
PIR:JE0378 UniGene:Rn.6955 ProteinModelPortal:Q9Z330 IntAct:Q9Z330
STRING:Q9Z330 REBASE:3019 PhosphoSite:Q9Z330 PRIDE:Q9Z330
UCSC:RGD:620979 BioCyc:MetaCyc:MONOMER-8581 ArrayExpress:Q9Z330
Genevestigator:Q9Z330 Uniprot:Q9Z330
Length = 1622
Score = 281 (104.0 bits), Expect = 1.7e-42, Sum P(4) = 1.7e-42
Identities = 78/254 (30%), Positives = 126/254 (49%)
Query: 440 LPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENV 499
LP GDV+ +CGGPPCQG SG NRF + KN ++ F+ +Y +P++ L+ENV
Sbjct: 1216 LPQKGDVEMLCGGPPCQGFSGMNRFNS--RTYSKFKNSLVVSFLSYCDYYRPRFFLLENV 1273
Query: 500 VDILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYP 559
+ + F + + + LV M YQ G++ AG YG+ Q R R + A P +KLP +P
Sbjct: 1274 RNFVSFRRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRRAIILAAAPGEKLPLFP 1333
Query: 560 LPTHEIVARG----VIPNEFQEII-VAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDE 614
P H R V+ ++ + + + ++ P + + + D +SDLP + N S E
Sbjct: 1334 EPLHVFAPRACQLSVVVDDKKFVSNITRLSSGPFRT---ITMRDTMSDLPEIQNGASAPE 1390
Query: 615 RKYGTVARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPF-QVNNDDYE-RVCCIPK 672
Y K+ R V+ +A + P+ + P+ QV+ R+ IP
Sbjct: 1391 ISY---------KW----RATVLVPEAAARVALPA--HPQGPYPQVHERAGGCRMRHIPL 1435
Query: 673 RKGANFRDLPGVLV 686
G+++RDLP + V
Sbjct: 1436 SPGSDWRDLPNIQV 1449
Score = 149 (57.5 bits), Expect = 1.7e-42, Sum P(4) = 1.7e-42
Identities = 29/59 (49%), Positives = 40/59 (67%)
Query: 726 FGRLWWDEIVNTVVTRAQPHNRI--LLHPSQDRVLTIRENARLQGFPDCYQLFGPVKER 782
+GRL WD +T VT +P + +LHP Q RV+++RE AR QGFPD Y+LFG + +R
Sbjct: 1518 YGRLEWDGFFSTTVTNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDTYRLFGNILDR 1576
Score = 118 (46.6 bits), Expect = 1.7e-42, Sum P(4) = 1.7e-42
Identities = 39/142 (27%), Positives = 66/142 (46%)
Query: 57 VKKKTQKNKPDSDLFFVSPPVSADEALKRYP--DRYKALNEEEEVLQARCHYTQASVDGC 114
VK+ + + D D+ + P + K+ DR L E ++ + R +Y + S+D
Sbjct: 700 VKEADEDEEADDDIPELPSPKKLHQGKKKKQNKDRISWLGEPVKIEENRTYYWKVSIDEE 759
Query: 115 LYNLGDDAYVKAEEGAVD-YIARIVELFESVDGEPYFKARWFYRAEDTVIKDLACLVDRK 173
+GD V ++ + Y+AR+ L+E +G+ F A WF DTV L D
Sbjct: 760 TLEVGDCVSVIPDDPSKPLYLARVTALWEDKNGQ-MFHAHWFCAGTDTV---LGATSDPL 815
Query: 174 RVFLSDVEDDNPLNCIVSKAKI 195
+FL ++ L+ I SK K+
Sbjct: 816 ELFLVGECENMQLSYIHSKVKV 837
Score = 91 (37.1 bits), Expect = 1.7e-42, Sum P(4) = 1.7e-42
Identities = 23/67 (34%), Positives = 37/67 (55%)
Query: 260 PEMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKVRNEAA 319
P++ LD++SGCG GL G +G+ T WAI++ A ++ + N+P T V E
Sbjct: 1142 PKLRTLDVFSGCG----GLTEGFHQAGIS-ETLWAIEMWEPAAQAFRLNNPGTTVFTEDC 1196
Query: 320 DDFLSLL 326
+ L L+
Sbjct: 1197 NVLLKLV 1203
Score = 63 (27.2 bits), Expect = 8.0e-37, Sum P(4) = 8.0e-37
Identities = 21/68 (30%), Positives = 32/68 (47%)
Query: 60 KTQKNKPDSDLFFVSPPVSADEALKRYPDRYKALNEEEEVLQARCHYTQASVDGCLYNLG 119
KTQ + + F +S A+ K P K L + EEV R + + + +G +Y LG
Sbjct: 885 KTQPAEDNKHKFCLSCIRLAELRQKEMP---KVLEQLEEV-DGRVYCSSITKNGVVYRLG 940
Query: 120 DDAYVKAE 127
D Y+ E
Sbjct: 941 DSVYLPPE 948
>UNIPROTKB|Q92072 [details] [associations]
symbol:DNMT1 "DNA (cytosine-5)-methyltransferase 1"
species:9031 "Gallus gallus" [GO:0008134 "transcription factor
binding" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003886 "DNA (cytosine-5-)-methyltransferase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR001025
InterPro:IPR001525 InterPro:IPR002857 InterPro:IPR010506
InterPro:IPR017198 InterPro:IPR018117 Pfam:PF00145 Pfam:PF01426
Pfam:PF02008 Pfam:PF06464 PIRSF:PIRSF037404 PRINTS:PR00105
PROSITE:PS00094 PROSITE:PS00095 PROSITE:PS51038 PROSITE:PS51058
SMART:SM00439 GO:GO:0005634 GO:GO:0006355 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0006351 KO:K00558 GO:GO:0003886
PANTHER:PTHR10629 InterPro:IPR022702 Pfam:PF12047 CTD:1786
HOVERGEN:HBG051384 EMBL:D43920 IPI:IPI00588424 PIR:JC4172
RefSeq:NP_996835.1 UniGene:Gga.1206 ProteinModelPortal:Q92072
REBASE:3020 PRIDE:Q92072 GeneID:396011 KEGG:gga:396011
NextBio:20816074 Uniprot:Q92072
Length = 1537
Score = 301 (111.0 bits), Expect = 9.1e-42, Sum P(4) = 9.1e-42
Identities = 84/273 (30%), Positives = 134/273 (49%)
Query: 423 CKEKLKEFVTKGYRSNIL----PLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQ 478
C LK V G ++N L P GDV+ +CGGPPCQG SG NRF + KN
Sbjct: 1106 CNVLLK-LVMSGEKTNSLGQKLPQKGDVEMLCGGPPCQGFSGMNRFNS--RTYSKFKNSL 1162
Query: 479 LLVFMDVIEYLKPKYVLMENVVDILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLP 538
++ F+ +Y +P++ L+ENV + + F + + + LV M YQ G++ AG YG+
Sbjct: 1163 VVSFLSYCDYYRPRFFLLENVRNFVSFKRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVA 1222
Query: 539 QFRLRVFLWGARPFKKLPQYPLPTHEIVARG----VIPNEFQEII-VAYANNQPCQLEKG 593
Q R R + A P +KLP +P P H R V+ ++ + + + + P +
Sbjct: 1223 QTRRRAIVLAAAPGEKLPMFPEPLHVFAPRACQLSVVVDDKKFVSNITRTYSGPFRT--- 1279
Query: 594 VLLSDAISDLPLVTNNESEDERKYGTVARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYD 653
+ + D +SDLP + N S E Y ++ FQ+ IR ++ +P +L D
Sbjct: 1280 ITVRDTMSDLPEIRNGASALEISYNGEPQSWFQRQIRGSQY------------QP-ILRD 1326
Query: 654 HRPFQVNNDDYERVCCIPKRKGANFRDLPGVLV 686
H ++ R+ IP G+++RDLP + V
Sbjct: 1327 HICKDMSALVAARMRHIPLAPGSDWRDLPNIEV 1359
Score = 146 (56.5 bits), Expect = 9.1e-42, Sum P(4) = 9.1e-42
Identities = 28/59 (47%), Positives = 40/59 (67%)
Query: 726 FGRLWWDEIVNTVVTRAQPHNRI--LLHPSQDRVLTIRENARLQGFPDCYQLFGPVKER 782
+GRL WD +T VT +P + +LHP Q RV+++RE AR QGFPD Y+LFG + ++
Sbjct: 1428 YGRLEWDGFFSTTVTNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDTYRLFGNILDK 1486
Score = 94 (38.1 bits), Expect = 9.1e-42, Sum P(4) = 9.1e-42
Identities = 24/72 (33%), Positives = 38/72 (52%)
Query: 260 PEMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKVRNEAA 319
P++ LD++SGCG +S G +GV T WAI++ A ++ + N+P T V E
Sbjct: 1052 PKLRTLDVFSGCGGLSEGF----HQAGVS-ETLWAIEMWEPAAQAFRLNNPGTTVFTEDC 1106
Query: 320 DDFLSLLKEWAK 331
+ L L+ K
Sbjct: 1107 NVLLKLVMSGEK 1118
Score = 88 (36.0 bits), Expect = 9.1e-42, Sum P(4) = 9.1e-42
Identities = 34/133 (25%), Positives = 54/133 (40%)
Query: 106 YTQASVDGCLYNLGDDAYVKAEEGAVD-YIARIVELFESVDGEPYFKARWFYRAEDTVIK 164
Y + +D +GD V ++ Y+AR+ ++E G+ F A WF DTV
Sbjct: 659 YQRVCIDSETLEVGDCVSVSPDDPTKPLYLARVTAMWEDSSGQ-MFHAHWFCPGSDTV-- 715
Query: 165 DLACLVDRKRVFLSDVEDDNPLNCIVSKAKI-----AE---VATNMDLEAKQKNIPPCDL 216
L D +FL D +D L+ I K + +E + +D+E K
Sbjct: 716 -LGATSDPLELFLVDECEDMQLSYIHGKVNVIYKPPSENWAMEGGLDMEIKMVEDDGRTY 774
Query: 217 YYDMKYTLPHLTF 229
+Y M Y + F
Sbjct: 775 FYQMWYDQEYARF 787
Score = 47 (21.6 bits), Expect = 1.5e-37, Sum P(4) = 1.5e-37
Identities = 12/42 (28%), Positives = 20/42 (47%)
Query: 89 RYKALNEEEEVLQ---ARCHYTQASVDGCLYNLGDDAYVKAE 127
R+K + + E L + Y A+ +G Y +GD Y+ E
Sbjct: 814 RHKEIPKVAEPLDEGDGKMFYAMATKNGVQYRVGDSVYLLPE 855
Score = 46 (21.3 bits), Expect = 2.1e-05, Sum P(2) = 2.1e-05
Identities = 32/128 (25%), Positives = 50/128 (39%)
Query: 616 KYGTVARTEFQKYIRLRRH-DVVNLSSAQ-----MASRPSLLYDHRP--FQVNNDDYERV 667
K T A+T K + R++ D +L Q P +L D R F N D +E
Sbjct: 251 KTSTPAKTTPPKCVDCRQYLDDPDLKFFQGDPDDALEEPEMLTDERLSIFDANEDGFESY 310
Query: 668 CCIPKRKGANFR--DLPGVLVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKP 725
+P+ K +F D G L D + + ++E + KP+ D + K
Sbjct: 311 EDLPQHKVTSFSVYDKRGHLCPFDTGLI-ERNIELYFSGAVKPIYDDNPC-LDGGVRAKK 368
Query: 726 FGRL--WW 731
G + WW
Sbjct: 369 LGPINAWW 376
>UNIPROTKB|Q24K09 [details] [associations]
symbol:DNMT1 "DNA (cytosine-5)-methyltransferase 1"
species:9913 "Bos taurus" [GO:0003886 "DNA
(cytosine-5-)-methyltransferase activity" evidence=ISS] [GO:0010216
"maintenance of DNA methylation" evidence=ISS] [GO:0005634
"nucleus" evidence=IEA] [GO:0071230 "cellular response to amino
acid stimulus" evidence=IEA] [GO:0051573 "negative regulation of
histone H3-K9 methylation" evidence=IEA] [GO:0051571 "positive
regulation of histone H3-K4 methylation" evidence=IEA] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0042127 "regulation of cell proliferation" evidence=IEA]
[GO:0016458 "gene silencing" evidence=IEA] [GO:0010628 "positive
regulation of gene expression" evidence=IEA] [GO:0008327
"methyl-CpG binding" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005721 "centromeric heterochromatin"
evidence=IEA] [GO:0005657 "replication fork" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0008134 "transcription factor
binding" evidence=IEA] InterPro:IPR001025 InterPro:IPR001525
InterPro:IPR002857 InterPro:IPR010506 InterPro:IPR017198
InterPro:IPR018117 Pfam:PF00145 Pfam:PF01426 Pfam:PF02008
Pfam:PF06464 PIRSF:PIRSF037404 PRINTS:PR00105 PROSITE:PS00094
PROSITE:PS00095 PROSITE:PS51038 PROSITE:PS51058 SMART:SM00439
GO:GO:0005634 GO:GO:0045892 GO:GO:0046872 GO:GO:0008270
GO:GO:0006351 GO:GO:0016568 GO:GO:0003723 GO:GO:0042127
GO:GO:0010628 GO:GO:0005721 GO:GO:0071230 GO:GO:0016458
GO:GO:0005657 GO:GO:0051573 GO:GO:0051571 eggNOG:COG0270 KO:K00558
GO:GO:0003886 PANTHER:PTHR10629 GO:GO:0010216 InterPro:IPR022702
Pfam:PF12047 EMBL:AY244709 EMBL:AY173048 EMBL:BC114063
IPI:IPI00711805 RefSeq:NP_872592.2 UniGene:Bt.108052
UniGene:Bt.48560 ProteinModelPortal:Q24K09 STRING:Q24K09
REBASE:7406 PRIDE:Q24K09 Ensembl:ENSBTAT00000003549 GeneID:281119
KEGG:bta:281119 CTD:1786 GeneTree:ENSGT00390000005100
HOGENOM:HOG000082497 HOVERGEN:HBG051384 InParanoid:Q24K09
OMA:SENWAME OrthoDB:EOG4T1HKN NextBio:20805188 GO:GO:0008327
Uniprot:Q24K09
Length = 1611
Score = 296 (109.3 bits), Expect = 3.4e-41, Sum P(4) = 3.4e-41
Identities = 78/256 (30%), Positives = 127/256 (49%)
Query: 436 RSNILPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVL 495
R LP GDV+ +CGGPPCQG SG NRF + KN ++ F+ +Y +P+Y L
Sbjct: 1204 RGQKLPQKGDVEMLCGGPPCQGFSGMNRFNS--RTYSKFKNSLVVSFLSYCDYYRPRYFL 1261
Query: 496 MENVVDILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKL 555
+ENV + + F + + + LV M YQ G++ AG YG+ Q R R + A P + L
Sbjct: 1262 LENVRNFVSFKRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRRAIILAAAPGEPL 1321
Query: 556 PQYPLPTHEIVARG----VIPNEFQEII-VAYANNQPCQLEKGVLLSDAISDLPLVTNNE 610
P +P P H R V+ ++ + + + ++ P + + + D +SDLP + N
Sbjct: 1322 PLFPEPLHVFAPRACQLSVVVDDKKFVSNITRLSSGPFRT---ITVRDTMSDLPEIRNGA 1378
Query: 611 SEDERKYGTVARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCI 670
S E Y ++ FQ+ +R ++ +P +L DH ++ R+ I
Sbjct: 1379 SALEISYNGEPQSWFQRQLRGSQY------------QP-ILRDHICKDMSALVAARMRHI 1425
Query: 671 PKRKGANFRDLPGVLV 686
P G+++RDLP + V
Sbjct: 1426 PLAPGSDWRDLPNIEV 1441
Score = 146 (56.5 bits), Expect = 3.4e-41, Sum P(4) = 3.4e-41
Identities = 28/59 (47%), Positives = 40/59 (67%)
Query: 726 FGRLWWDEIVNTVVTRAQPHNRI--LLHPSQDRVLTIRENARLQGFPDCYQLFGPVKER 782
+GRL WD +T VT +P + +LHP Q RV+++RE AR QGFPD Y+LFG + ++
Sbjct: 1510 YGRLEWDGFFSTTVTNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDTYRLFGNILDK 1568
Score = 95 (38.5 bits), Expect = 3.4e-41, Sum P(4) = 3.4e-41
Identities = 27/94 (28%), Positives = 43/94 (45%)
Query: 103 RCHYTQASVDGCLYNLGDDAYVKAEEGAVD-YIARIVELFESVDGEPYFKARWFYRAEDT 161
+ +Y + +D +GD V ++ + Y+AR+ L+E F A WF DT
Sbjct: 741 KSYYKKVCIDSETLEVGDCVSVIPDDSSKPLYLARVTALWEDSSNGQMFHAHWFCAGTDT 800
Query: 162 VIKDLACLVDRKRVFLSDVEDDNPLNCIVSKAKI 195
V L D +FL D +D L+ I SK ++
Sbjct: 801 V---LGATSDPLELFLVDECEDMQLSYIHSKVQV 831
Score = 88 (36.0 bits), Expect = 3.4e-41, Sum P(4) = 3.4e-41
Identities = 21/67 (31%), Positives = 37/67 (55%)
Query: 260 PEMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKVRNEAA 319
P++ LD++SGCG +S G +G+ T WAI++ A ++ + N+P + V E
Sbjct: 1134 PKLRTLDVFSGCGGLSEGF----HQAGIS-ETLWAIEMWDPAAQAFRLNNPGSTVFTEDC 1188
Query: 320 DDFLSLL 326
+ L L+
Sbjct: 1189 NVLLKLV 1195
Score = 56 (24.8 bits), Expect = 3.5e-37, Sum P(4) = 3.5e-37
Identities = 19/68 (27%), Positives = 30/68 (44%)
Query: 60 KTQKNKPDSDLFFVSPPVSADEALKRYPDRYKALNEEEEVLQARCHYTQASVDGCLYNLG 119
KTQ + + F S A+ K P + L + L+ R Y+ A+ +G Y +G
Sbjct: 878 KTQPTEDNKYKFCASCARLAEMRQKEIPRVVEQLQD----LEGRVLYSLATKNGVQYRVG 933
Query: 120 DDAYVKAE 127
D Y+ E
Sbjct: 934 DGVYLPPE 941
Score = 43 (20.2 bits), Expect = 9.0e-36, Sum P(5) = 9.0e-36
Identities = 15/49 (30%), Positives = 23/49 (46%)
Query: 86 YPDRYKALNEEEEVLQARCHYTQASVDGCLYN----LGDDA-YVKAEEG 129
Y + K+L ++ L+ H +GCL N G+D V AE+G
Sbjct: 78 YLAKVKSLLNKDLSLENGAHAFSREANGCLENGSQTSGEDCRVVMAEKG 126
Score = 41 (19.5 bits), Expect = 9.0e-36, Sum P(5) = 9.0e-36
Identities = 12/30 (40%), Positives = 14/30 (46%)
Query: 126 AEEGAVDYIARIVELFESVDGEPYFKARWF 155
A EG VD A L DG+ YF W+
Sbjct: 841 AMEGGVDPEA----LMSEDDGKTYFYQLWY 866
>UNIPROTKB|E2RHC6 [details] [associations]
symbol:DNMT1 "Cytosine-specific methyltransferase"
species:9615 "Canis lupus familiaris" [GO:0003886 "DNA
(cytosine-5-)-methyltransferase activity" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0008134 "transcription factor
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR001025
InterPro:IPR001525 InterPro:IPR002857 InterPro:IPR010506
InterPro:IPR017198 InterPro:IPR018117 Pfam:PF00145 Pfam:PF01426
Pfam:PF02008 Pfam:PF06464 PIRSF:PIRSF037404 PRINTS:PR00105
PROSITE:PS00094 PROSITE:PS00095 PROSITE:PS51038 PROSITE:PS51058
SMART:SM00439 GO:GO:0005634 GO:GO:0003677 GO:GO:0008270
GO:GO:0003886 PANTHER:PTHR10629 InterPro:IPR022702 Pfam:PF12047
GeneTree:ENSGT00390000005100 EMBL:AAEX03012427 EMBL:AAEX03012426
Ensembl:ENSCAFT00000028398 Uniprot:E2RHC6
Length = 1613
Score = 301 (111.0 bits), Expect = 7.9e-41, Sum P(4) = 7.9e-41
Identities = 80/256 (31%), Positives = 128/256 (50%)
Query: 436 RSNILPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVL 495
R LP GDV+ +CGGPPCQG SG NRF + KN ++ F+ +Y +P+Y L
Sbjct: 1206 RGQKLPQKGDVEMLCGGPPCQGFSGMNRFNS--RTYSKFKNSLVVSFLSYCDYYRPRYFL 1263
Query: 496 MENVVDILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKL 555
+ENV + + F + + + LV M YQ G++ AG YG+ Q R R + A P +KL
Sbjct: 1264 LENVRNFVSFKRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRRAIILAAAPGEKL 1323
Query: 556 PQYPLPTHEIVARG----VIPNEFQEII-VAYANNQPCQLEKGVLLSDAISDLPLVTNNE 610
P +P P H R V+ ++ + + + ++ P + + + D +SDLP V N
Sbjct: 1324 PLFPEPLHVFAPRACQLSVVVDDKKFVSNITRLSSGPFRT---ITVRDTMSDLPEVRNGA 1380
Query: 611 SEDERKYGTVARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCI 670
S E Y ++ FQ+ +R ++ +P +L DH ++ R+ I
Sbjct: 1381 SALEILYNGEPQSWFQRQLRGSQY------------QP-ILRDHICKDMSALVAARMRHI 1427
Query: 671 PKRKGANFRDLPGVLV 686
P G+++RDLP + V
Sbjct: 1428 PLAPGSDWRDLPNIEV 1443
Score = 146 (56.5 bits), Expect = 7.9e-41, Sum P(4) = 7.9e-41
Identities = 28/59 (47%), Positives = 40/59 (67%)
Query: 726 FGRLWWDEIVNTVVTRAQPHNRI--LLHPSQDRVLTIRENARLQGFPDCYQLFGPVKER 782
+GRL WD +T VT +P + +LHP Q RV+++RE AR QGFPD Y+LFG + ++
Sbjct: 1513 YGRLEWDGFFSTTVTNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDTYRLFGNILDK 1571
Score = 88 (36.0 bits), Expect = 7.9e-41, Sum P(4) = 7.9e-41
Identities = 21/67 (31%), Positives = 37/67 (55%)
Query: 260 PEMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKVRNEAA 319
P++ LD++SGCG +S G +G+ T WAI++ A ++ + N+P + V E
Sbjct: 1136 PKLRTLDVFSGCGGLSEGF----HQAGIS-ETLWAIEMWDPAAQAFRLNNPGSTVFTEDC 1190
Query: 320 DDFLSLL 326
+ L L+
Sbjct: 1191 NVLLKLV 1197
Score = 86 (35.3 bits), Expect = 7.9e-41, Sum P(4) = 7.9e-41
Identities = 28/94 (29%), Positives = 42/94 (44%)
Query: 105 HYTQASVDGCLYNLGDDAYVKAEEGAVD-YIA--RIVELFESVDGEPYFKARWFYRAEDT 161
+Y + +D +GD V ++ + Y+A R+ L+E F A WF DT
Sbjct: 743 YYKKVCIDSETLEVGDCVSVIPDDSSKPLYLASSRVTALWEDGSNGQMFHAHWFCAGTDT 802
Query: 162 VIKDLACLVDRKRVFLSDVEDDNPLNCIVSKAKI 195
V L D +FL D +D L+ I SK K+
Sbjct: 803 V---LGATSDPLELFLVDECEDMQLSYIHSKVKV 833
Score = 62 (26.9 bits), Expect = 2.4e-38, Sum P(4) = 2.4e-38
Identities = 21/68 (30%), Positives = 32/68 (47%)
Query: 60 KTQKNKPDSDLFFVSPPVSADEALKRYPDRYKALNEEEEVLQARCHYTQASVDGCLYNLG 119
KTQ + + F VS A+ K P + L + E+ L R Y+ A+ +G Y +G
Sbjct: 880 KTQPTEDNKYKFCVSCARLAEMRQKEIP---RVLEQLED-LDNRVLYSSATKNGIQYRVG 935
Query: 120 DDAYVKAE 127
D Y+ E
Sbjct: 936 DGVYLLPE 943
Score = 44 (20.5 bits), Expect = 2.7e-36, Sum P(4) = 2.7e-36
Identities = 14/41 (34%), Positives = 22/41 (53%)
Query: 390 PNKTKKPGVYFKVRWKGYGPSED-TWEPIKGLSKCK-EKLK 428
PN + PG K + KG G ++ T EP + ++ K KL+
Sbjct: 1099 PNHARSPGNKGKGKGKGKGKAKSQTCEPSEPETEIKLPKLR 1139
Score = 40 (19.1 bits), Expect = 6.3e-36, Sum P(5) = 6.3e-36
Identities = 12/30 (40%), Positives = 15/30 (50%)
Query: 126 AEEGAVDYIARIVELFESVDGEPYFKARWF 155
A EG +D A I E DG+ YF W+
Sbjct: 843 ALEGGMDPEALITE----DDGKTYFYQLWY 868
Score = 40 (19.1 bits), Expect = 6.3e-36, Sum P(5) = 6.3e-36
Identities = 15/48 (31%), Positives = 23/48 (47%)
Query: 86 YPDRYKALNEEEEVLQARCHYTQASVDGCLYN----LGDDAYV-KAEE 128
Y + K+L ++ L+ H ++GCL N G+D V AEE
Sbjct: 78 YLAKVKSLLNKDLSLENGAHAFSREMNGCLENGSQTSGEDRRVGMAEE 125
>UNIPROTKB|D4A8Z6 [details] [associations]
symbol:Dnmt1 "Cytosine-specific methyltransferase"
species:10116 "Rattus norvegicus" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003886 "DNA (cytosine-5-)-methyltransferase
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0008134 "transcription factor binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001025
InterPro:IPR001525 InterPro:IPR002857 InterPro:IPR010506
InterPro:IPR017198 InterPro:IPR018117 Pfam:PF00145 Pfam:PF01426
Pfam:PF02008 Pfam:PF06464 PIRSF:PIRSF037404 PRINTS:PR00105
PROSITE:PS00094 PROSITE:PS00095 PROSITE:PS51038 PROSITE:PS51058
SMART:SM00439 GO:GO:0005634 GO:GO:0003677 GO:GO:0008270
GO:GO:0003886 PANTHER:PTHR10629 InterPro:IPR022702 Pfam:PF12047
IPI:IPI00327802 ProteinModelPortal:D4A8Z6
Ensembl:ENSRNOT00000061192 ArrayExpress:D4A8Z6 Uniprot:D4A8Z6
Length = 1616
Score = 213 (80.0 bits), Expect = 5.6e-35, Sum P(4) = 5.6e-35
Identities = 67/252 (26%), Positives = 117/252 (46%)
Query: 440 LPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENV 499
LP GDV+ +CGGPPCQG SG NRF + KN ++ F+ + + + + ++M ++
Sbjct: 1210 LPQKGDVEMLCGGPPCQGFSGMNRFNS--RTYSKFKNSLVVSFLSLRDREESEDIVMGSI 1267
Query: 500 VDILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYP 559
+ G + + L ++ AG YG+ Q R R + A P +KLP +P
Sbjct: 1268 PRESGWQGPMQTSMHMRCCFPVWLSVSLPLLQAGQYGVAQTRRRAIILAAAPGEKLPLFP 1327
Query: 560 LPTHEIVARG----VIPNEFQEII-VAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDE 614
P H R V+ ++ + + + ++ P + + + D +SDLP + N S E
Sbjct: 1328 EPLHVFAPRACQLSVVVDDKKFVSNITRLSSGPFRT---ITVRDTMSDLPEIQNGASAPE 1384
Query: 615 RKYGTVARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRK 674
Y ++ FQ+ +R + +P +L DH ++ R+ IP
Sbjct: 1385 ISYNGEPQSWFQRQLRGSHY------------QP-ILRDHICKDMSALVAARMRHIPLSP 1431
Query: 675 GANFRDLPGVLV 686
G+++RDLP + V
Sbjct: 1432 GSDWRDLPNIQV 1443
Score = 149 (57.5 bits), Expect = 5.6e-35, Sum P(4) = 5.6e-35
Identities = 29/59 (49%), Positives = 40/59 (67%)
Query: 726 FGRLWWDEIVNTVVTRAQPHNRI--LLHPSQDRVLTIRENARLQGFPDCYQLFGPVKER 782
+GRL WD +T VT +P + +LHP Q RV+++RE AR QGFPD Y+LFG + +R
Sbjct: 1512 YGRLEWDGFFSTTVTNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDTYRLFGNILDR 1570
Score = 118 (46.6 bits), Expect = 5.6e-35, Sum P(4) = 5.6e-35
Identities = 39/142 (27%), Positives = 66/142 (46%)
Query: 57 VKKKTQKNKPDSDLFFVSPPVSADEALKRYP--DRYKALNEEEEVLQARCHYTQASVDGC 114
VK+ + + D D+ + P + K+ DR L E ++ + R +Y + S+D
Sbjct: 696 VKEADEDEEADDDIPELPSPKKLHQGKKKKQNKDRISWLGEPVKIEENRTYYWKVSIDEE 755
Query: 115 LYNLGDDAYVKAEEGAVD-YIARIVELFESVDGEPYFKARWFYRAEDTVIKDLACLVDRK 173
+GD V ++ + Y+AR+ L+E +G+ F A WF DTV L D
Sbjct: 756 TLEVGDCVSVIPDDPSKPLYLARVTALWEDKNGQ-MFHAHWFCAGTDTV---LGATSDPL 811
Query: 174 RVFLSDVEDDNPLNCIVSKAKI 195
+FL ++ L+ I SK K+
Sbjct: 812 ELFLVGECENMQLSYIHSKVKV 833
Score = 91 (37.1 bits), Expect = 5.6e-35, Sum P(4) = 5.6e-35
Identities = 23/67 (34%), Positives = 37/67 (55%)
Query: 260 PEMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKVRNEAA 319
P++ LD++SGCG GL G +G+ T WAI++ A ++ + N+P T V E
Sbjct: 1136 PKLRTLDVFSGCG----GLTEGFHQAGIS-ETLWAIEMWEPAAQAFRLNNPGTTVFTEDC 1190
Query: 320 DDFLSLL 326
+ L L+
Sbjct: 1191 NVLLKLV 1197
Score = 65 (27.9 bits), Expect = 1.6e-29, Sum P(4) = 1.6e-29
Identities = 21/68 (30%), Positives = 32/68 (47%)
Query: 60 KTQKNKPDSDLFFVSPPVSADEALKRYPDRYKALNEEEEVLQARCHYTQASVDGCLYNLG 119
KTQ + + F +S A+ K P K L + EEV R + + + +G +Y LG
Sbjct: 881 KTQPTEDNKHKFCLSCIRLAELRQKEMP---KVLEQLEEV-DGRVYCSSITKNGVVYRLG 936
Query: 120 DDAYVKAE 127
D Y+ E
Sbjct: 937 DSVYLPPE 944
>UNIPROTKB|K7ENW7 [details] [associations]
symbol:DNMT1 "DNA (cytosine-5)-methyltransferase 1"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0006306 "DNA methylation" evidence=IEA] [GO:0008168
"methyltransferase activity" evidence=IEA] InterPro:IPR001525
Pfam:PF00145 PRINTS:PR00105 EMBL:AC020931 PANTHER:PTHR10629
EMBL:AC010077 EMBL:AC011511 HGNC:HGNC:2976 Ensembl:ENST00000588913
Uniprot:K7ENW7
Length = 389
Score = 237 (88.5 bits), Expect = 5.2e-28, Sum P(2) = 5.2e-28
Identities = 70/237 (29%), Positives = 115/237 (48%)
Query: 455 CQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILKFSGGFLARYA 514
CQG SG NRF + KN ++ F+ +Y +P++ L+ENV + + F + +
Sbjct: 2 CQGFSGMNRFNS--RTYSKFKNSLVVSFLSYCDYYRPRFFLLENVRNFVSFKRSMVLKLT 59
Query: 515 VGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYPLPTHEIVARG----V 570
+ LV M YQ G++ AG YG+ Q R R + A P +KLP +P P H R V
Sbjct: 60 LRCLVRMGYQCTFGVLQAGQYGVAQTRRRAIILAAAPGEKLPLFPEPLHVFAPRACQLSV 119
Query: 571 IPNEFQEII-VAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYGTVARTEFQKYI 629
+ ++ + + + ++ P + + + D +SDLP V N S E Y ++ FQ+ +
Sbjct: 120 VVDDKKFVSNITRLSSGPFRT---ITVRDTMSDLPEVRNGASALEISYNGEPQSWFQRQL 176
Query: 630 RLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGANFRDLPGVLV 686
R AQ +P +L DH ++ R+ IP G+++RDLP + V
Sbjct: 177 R----------GAQY--QP-ILRDHICKDMSALVAARMRHIPLAPGSDWRDLPNIEV 220
Score = 146 (56.5 bits), Expect = 5.2e-28, Sum P(2) = 5.2e-28
Identities = 28/59 (47%), Positives = 40/59 (67%)
Query: 726 FGRLWWDEIVNTVVTRAQPHNRI--LLHPSQDRVLTIRENARLQGFPDCYQLFGPVKER 782
+GRL WD +T VT +P + +LHP Q RV+++RE AR QGFPD Y+LFG + ++
Sbjct: 290 YGRLEWDGFFSTTVTNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDTYRLFGNILDK 348
>TIGR_CMR|SPO_1049 [details] [associations]
symbol:SPO_1049 "DNA methylase, C-5 cytosine-specific
family" species:246200 "Ruegeria pomeroyi DSS-3" [GO:0003886 "DNA
(cytosine-5-)-methyltransferase activity" evidence=ISS] [GO:0006304
"DNA modification" evidence=ISS] InterPro:IPR001525 Pfam:PF00145
PRINTS:PR00105 EMBL:CP000031 GenomeReviews:CP000031_GR
GO:GO:0003677 GO:GO:0006306 GO:GO:0008168 KO:K00558
PANTHER:PTHR10629 TIGRFAMs:TIGR00675 OMA:LLYEFAR RefSeq:YP_166300.1
ProteinModelPortal:Q5LUK5 REBASE:10710 GeneID:3194254
KEGG:sil:SPO1049 PATRIC:23375391 HOGENOM:HOG000225505
ProtClustDB:CLSK933423 Uniprot:Q5LUK5
Length = 373
Score = 173 (66.0 bits), Expect = 1.9e-24, Sum P(4) = 1.9e-24
Identities = 37/121 (30%), Positives = 61/121 (50%)
Query: 443 PGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDI 502
PG++ + GGPPCQ S +N Q + D + ++ +++ L+P++++MENV I
Sbjct: 70 PGELTVLAGGPPCQAYSVYNH----QRGMHDERATLFKEYLRIVDGLRPEWIVMENVTGI 125
Query: 503 LKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYPLPT 562
GG L ++ Y+ ++ A YG+PQ R RV G R + +P PT
Sbjct: 126 YSIGGGEAVAAIKSELAALGYEVEEAVLRAEEYGVPQERRRVVFIGNRVGVPI-SHPEPT 184
Query: 563 H 563
H
Sbjct: 185 H 185
Score = 145 (56.1 bits), Expect = 1.9e-24, Sum P(4) = 1.9e-24
Identities = 27/69 (39%), Positives = 41/69 (59%)
Query: 709 LVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTRAQPHNRILLHPSQDRVLTIRENARLQG 768
L+P + + TK +GR+ WD + TV+T+ H +HP QDR +++RE ARLQ
Sbjct: 268 LLPAGMKRAKRSDHTKRYGRMTWDGLSCTVLTKCDIHWGAYIHPEQDRAISVREAARLQA 327
Query: 769 FPDCYQLFG 777
FPD ++ G
Sbjct: 328 FPDWFEFHG 336
Score = 63 (27.2 bits), Expect = 1.9e-24, Sum P(4) = 1.9e-24
Identities = 13/37 (35%), Positives = 21/37 (56%)
Query: 594 VLLSDAISDLPLVTNNESEDERKYGTVARTEFQKYIR 630
V + DAI DLP + N E++ + Y T +Q+ +R
Sbjct: 194 VTIKDAIGDLPALENGEAKPDAAYLDGKPTSYQRQMR 230
Score = 52 (23.4 bits), Expect = 1.9e-24, Sum P(4) = 1.9e-24
Identities = 15/49 (30%), Positives = 24/49 (48%)
Query: 265 LDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETK 313
+DL+ G G +S GL ++G ++ DI A K+ + HP K
Sbjct: 6 IDLFCGAGGLSAGL----EMAGFTVLA--GNDIFDAAGKTFEATHPRAK 48
>UNIPROTKB|D4A0P3 [details] [associations]
symbol:Dnmt1 "DNA (cytosine-5)-methyltransferase 1"
species:10116 "Rattus norvegicus" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003886 "DNA (cytosine-5-)-methyltransferase
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0008134 "transcription factor binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001025
InterPro:IPR001525 InterPro:IPR002857 InterPro:IPR010506
InterPro:IPR017198 InterPro:IPR018117 Pfam:PF00145 Pfam:PF01426
Pfam:PF02008 Pfam:PF06464 PIRSF:PIRSF037404 PROSITE:PS00095
PROSITE:PS51038 PROSITE:PS51058 SMART:SM00439 GO:GO:0005634
GO:GO:0003677 GO:GO:0008270 GO:GO:0003886 PANTHER:PTHR10629
InterPro:IPR022702 Pfam:PF12047 GeneTree:ENSGT00390000005100
IPI:IPI00947847 ProteinModelPortal:D4A0P3
Ensembl:ENSRNOT00000064304 ArrayExpress:D4A0P3 Uniprot:D4A0P3
Length = 1410
Score = 149 (57.5 bits), Expect = 1.7e-17, Sum P(4) = 1.7e-17
Identities = 29/59 (49%), Positives = 40/59 (67%)
Query: 726 FGRLWWDEIVNTVVTRAQPHNRI--LLHPSQDRVLTIRENARLQGFPDCYQLFGPVKER 782
+GRL WD +T VT +P + +LHP Q RV+++RE AR QGFPD Y+LFG + +R
Sbjct: 1306 YGRLEWDGFFSTTVTNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDTYRLFGNILDR 1364
Score = 118 (46.6 bits), Expect = 1.7e-17, Sum P(4) = 1.7e-17
Identities = 39/142 (27%), Positives = 66/142 (46%)
Query: 57 VKKKTQKNKPDSDLFFVSPPVSADEALKRYP--DRYKALNEEEEVLQARCHYTQASVDGC 114
VK+ + + D D+ + P + K+ DR L E ++ + R +Y + S+D
Sbjct: 699 VKEADEDEEADDDIPELPSPKKLHQGKKKKQNKDRISWLGEPVKIEENRTYYWKVSIDEE 758
Query: 115 LYNLGDDAYVKAEEGAVD-YIARIVELFESVDGEPYFKARWFYRAEDTVIKDLACLVDRK 173
+GD V ++ + Y+AR+ L+E +G+ F A WF DTV L D
Sbjct: 759 TLEVGDCVSVIPDDPSKPLYLARVTALWEDKNGQ-MFHAHWFCAGTDTV---LGATSDPL 814
Query: 174 RVFLSDVEDDNPLNCIVSKAKI 195
+FL ++ L+ I SK K+
Sbjct: 815 ELFLVGECENMQLSYIHSKVKV 836
Score = 91 (37.1 bits), Expect = 1.7e-17, Sum P(4) = 1.7e-17
Identities = 23/67 (34%), Positives = 37/67 (55%)
Query: 260 PEMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKVRNEAA 319
P++ LD++SGCG GL G +G+ T WAI++ A ++ + N+P T V E
Sbjct: 1141 PKLRTLDVFSGCG----GLTEGFHQAGIS-ETLWAIEMWEPAAQAFRLNNPGTTVFTEDC 1195
Query: 320 DDFLSLL 326
+ L L+
Sbjct: 1196 NVLLKLV 1202
Score = 65 (27.9 bits), Expect = 3.5e-12, Sum P(4) = 3.5e-12
Identities = 21/68 (30%), Positives = 32/68 (47%)
Query: 60 KTQKNKPDSDLFFVSPPVSADEALKRYPDRYKALNEEEEVLQARCHYTQASVDGCLYNLG 119
KTQ + + F +S A+ K P K L + EEV R + + + +G +Y LG
Sbjct: 884 KTQPTEDNKHKFCLSCIRLAELRQKEMP---KVLEQLEEV-DGRVYCSSITKNGVVYRLG 939
Query: 120 DDAYVKAE 127
D Y+ E
Sbjct: 940 DSVYLPPE 947
Score = 43 (20.2 bits), Expect = 1.7e-17, Sum P(4) = 1.7e-17
Identities = 8/17 (47%), Positives = 12/17 (70%)
Query: 670 IPKRKGANFRDLPGVLV 686
IP G+++RDLP + V
Sbjct: 1221 IPLSPGSDWRDLPNIQV 1237
>UNIPROTKB|O34939 [details] [associations]
symbol:ydiO "Probable BsuMI modification methylase subunit
YdiO" species:224308 "Bacillus subtilis subsp. subtilis str. 168"
[GO:0008168 "methyltransferase activity" evidence=NAS] [GO:0009307
"DNA restriction-modification system" evidence=IMP] [GO:0032776
"DNA methylation on cytosine" evidence=IMP] InterPro:IPR001525
Pfam:PF00145 PRINTS:PR00105 PROSITE:PS00094 PROSITE:PS00095
GO:GO:0003677 EMBL:AL009126 GenomeReviews:AL009126_GR GO:GO:0008168
eggNOG:COG0270 KO:K00558 GO:GO:0003886 GO:GO:0090116
PANTHER:PTHR10629 HSSP:O14717 TIGRFAMs:TIGR00675 GO:GO:0009307
EMBL:AB007637 PIR:H69787 RefSeq:NP_388487.1
ProteinModelPortal:O34939 SMR:O34939 REBASE:3612
EnsemblBacteria:EBBACT00000001239 GeneID:939892 KEGG:bsu:BSU06060
PATRIC:18972844 GenoList:BSU06060 HOGENOM:HOG000098493 OMA:LLYEFAR
ProtClustDB:CLSK2460890 BioCyc:BSUB:BSU06060-MONOMER Uniprot:O34939
Length = 427
Score = 124 (48.7 bits), Expect = 7.4e-11, Sum P(3) = 7.4e-11
Identities = 36/113 (31%), Positives = 52/113 (46%)
Query: 446 VDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILKF 505
+DFI GPPCQG S N +D +N L+ VIE +P VL+ENV I+
Sbjct: 167 IDFILAGPPCQGHSDLNN----HTRRKDPRNALLMRVSRVIELFQPSSVLVENVPGIIHD 222
Query: 506 SGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGAR-PFKKLPQ 557
G + L + Y ++ A G+ Q R R F++ ++ P L Q
Sbjct: 223 KSGSFKEFK-NHLKTQGYYFDEIVLNAEKLGVSQARRRYFIFASKTPVSSLNQ 274
Score = 83 (34.3 bits), Expect = 7.4e-11, Sum P(3) = 7.4e-11
Identities = 27/96 (28%), Positives = 43/96 (44%)
Query: 689 DNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTRA--QPHN 746
+NK R + E + + PD + + S +GR++WD T+ TR
Sbjct: 311 ENKRRIEYLFENNLFELPNSERPD-CHRLKPHSYKSVYGRMYWDRPAPTI-TRGFGSTGQ 368
Query: 747 RILLHPSQDRVLTIRENARLQGFPDCYQLFGPVKER 782
+H R +T E AR+Q FPD + FG ++ R
Sbjct: 369 GRFVHSLLKRTITPHEAARIQFFPDFFN-FGDLRRR 403
Score = 66 (28.3 bits), Expect = 7.4e-11, Sum P(3) = 7.4e-11
Identities = 16/63 (25%), Positives = 30/63 (47%)
Query: 262 MSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKVRNEAADD 321
+++ DL+SGCG +S G+ G+ +A D+N A + N NE+ +
Sbjct: 84 INIADLFSGCGGLSLGVWEACRALGINPRFSFACDLNEAALSVYEKNFSPDFSLNESIEK 143
Query: 322 FLS 324
++
Sbjct: 144 HIN 146
>UNIPROTKB|F1PAS9 [details] [associations]
symbol:DNMT1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008168 "methyltransferase activity"
evidence=IEA] [GO:0006306 "DNA methylation" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR001525
Pfam:PF00145 PRINTS:PR00105 GO:GO:0003677 GO:GO:0006306
GO:GO:0008168 PANTHER:PTHR10629 GeneTree:ENSGT00390000005100
EMBL:AAEX03010534 Ensembl:ENSCAFT00000013291 OMA:TEDCHAL
Uniprot:F1PAS9
Length = 477
Score = 143 (55.4 bits), Expect = 1.5e-09, Sum P(4) = 1.5e-09
Identities = 47/167 (28%), Positives = 75/167 (44%)
Query: 441 PLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVV 500
P G V +CGGPPCQG+ G NR +P + +KN ++ + +Y +P+ L+ENV
Sbjct: 126 PRRGAVVMLCGGPPCQGL-GINRVTSPTCS--KLKNTLVVSLLSYCDYYRPRCFLLENVR 182
Query: 501 DILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYPL 560
+ + F + R +V S Q G+ AG G Q + R + A P K P P
Sbjct: 183 NSVSFQRSTVLRLSVPAS-STWLQWTPGVSQAGRCGPAQTQRRAIILAAAPGKP-PLAPE 240
Query: 561 PTHEIVARG-----VIPNEFQEIIVAYANNQPCQLEKGVLLSDAISD 602
AR V+ F + +++ P + + + D +SD
Sbjct: 241 LLRVFAARACQLSVVVDKRFVSNVTGFSSG-PFRT---ITVRDTVSD 283
Score = 73 (30.8 bits), Expect = 1.5e-09, Sum P(4) = 1.5e-09
Identities = 16/34 (47%), Positives = 22/34 (64%)
Query: 749 LLHPSQDRVLTIRENARLQGFPDCYQLFGPVKER 782
+LHP Q RV + +E A QGFPD Y FG + ++
Sbjct: 433 VLHPEQHRV-SEQECAPSQGFPDAYGPFGNIPDK 465
Score = 43 (20.2 bits), Expect = 1.5e-09, Sum P(4) = 1.5e-09
Identities = 14/43 (32%), Positives = 22/43 (51%)
Query: 260 PEMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDI-NPHA 301
P++ D +SGCG G +G+ T WAI++ +P A
Sbjct: 61 PKLRTSDAFSGCGGWW-----GGHRAGLP-ETLWAIEMWDPAA 97
Score = 39 (18.8 bits), Expect = 1.5e-09, Sum P(4) = 1.5e-09
Identities = 7/13 (53%), Positives = 10/13 (76%)
Query: 670 IPKRKGANFRDLP 682
IP G+++RDLP
Sbjct: 338 IPPAPGSDWRDLP 350
>FB|FBgn0030854 [details] [associations]
symbol:CG8289 species:7227 "Drosophila melanogaster"
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR000953
PROSITE:PS50013 SMART:SM00298 Pfam:PF00385 GO:GO:0005634
EMBL:AE014298 InterPro:IPR016197 SUPFAM:SSF54160 InterPro:IPR023780
HSSP:P83917 EMBL:AY051870 RefSeq:NP_573229.1 UniGene:Dm.4458
SMR:Q9VX35 MINT:MINT-964717 STRING:Q9VX35
EnsemblMetazoa:FBtr0074484 GeneID:32741 KEGG:dme:Dmel_CG8289
UCSC:CG8289-RA FlyBase:FBgn0030854 eggNOG:NOG245488
InParanoid:Q9VX35 OMA:GVANESE OrthoDB:EOG4BRV3C ChiTaRS:CG8289
GenomeRNAi:32741 NextBio:780137 Uniprot:Q9VX35
Length = 336
Score = 129 (50.5 bits), Expect = 4.2e-05, P = 4.2e-05
Identities = 27/66 (40%), Positives = 43/66 (65%)
Query: 368 DDANVPNEEFEVERLIAVCYGDPNKTKKPGVYFKVRWKGYGPSEDTWEPIKGLSKCKEKL 427
DD+ P +++EVE+++ D TK+ G FK+RWK YGP +D+WEP K L+ C +
Sbjct: 224 DDSIDPEKQWEVEKIL-----DHVATKE-GDMFKIRWKKYGPKDDSWEPSKNLA-CDALI 276
Query: 428 KEFVTK 433
++F+ K
Sbjct: 277 EKFMRK 282
>UNIPROTKB|O14717 [details] [associations]
symbol:TRDMT1 "tRNA (cytosine(38)-C(5))-methyltransferase"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0008033 "tRNA
processing" evidence=IEA] [GO:0001975 "response to amphetamine"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003886 "DNA
(cytosine-5-)-methyltransferase activity" evidence=TAS] [GO:0090116
"C-5 methylation of cytosine" evidence=TAS] InterPro:IPR001525
InterPro:IPR018117 Pfam:PF00145 PRINTS:PR00105 PROSITE:PS00094
PROSITE:PS00095 GO:GO:0005634 GO:GO:0003677 GO:GO:0001975
GO:GO:0003723 EMBL:CH471072 GO:GO:0008033 eggNOG:COG0270
GO:GO:0003886 PANTHER:PTHR10629 KO:K15336 OMA:LFYEFAR
TIGRFAMs:TIGR00675 EMBL:AC067747 CTD:1787 HOVERGEN:HBG051385
InterPro:IPR025813 EMBL:AF012128 EMBL:AJ223333 EMBL:AF045888
EMBL:EF444974 EMBL:AL133415 EMBL:BC047733 EMBL:AF329940
EMBL:AF329941 EMBL:AF329942 EMBL:AF329943 EMBL:AF329944
IPI:IPI00034003 IPI:IPI00219905 IPI:IPI00219906 IPI:IPI00219907
IPI:IPI00219908 IPI:IPI00221269 RefSeq:NP_004403.1
UniGene:Hs.351665 PDB:1G55 PDBsum:1G55 ProteinModelPortal:O14717
SMR:O14717 IntAct:O14717 STRING:O14717 PhosphoSite:O14717
PaxDb:O14717 PRIDE:O14717 Ensembl:ENST00000351358
Ensembl:ENST00000358282 Ensembl:ENST00000377799
Ensembl:ENST00000412821 Ensembl:ENST00000424636
Ensembl:ENST00000495022 Ensembl:ENST00000525762 GeneID:1787
KEGG:hsa:1787 UCSC:uc001iop.3 GeneCards:GC10M017098 HGNC:HGNC:2977
HPA:CAB009468 MIM:602478 neXtProt:NX_O14717 PharmGKB:PA162406922
InParanoid:O14717 PhylomeDB:O14717 BioCyc:MetaCyc:HS03011-MONOMER
ChiTaRS:TRDMT1 EvolutionaryTrace:O14717 GenomeRNAi:1787
NextBio:7271 ArrayExpress:O14717 Bgee:O14717 CleanEx:HS_TRDMT1
Genevestigator:O14717 GermOnline:ENSG00000107614 Uniprot:O14717
Length = 391
Score = 108 (43.1 bits), Expect = 8.2e-05, Sum P(2) = 8.2e-05
Identities = 39/134 (29%), Positives = 59/134 (44%)
Query: 447 DFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLK--PKYVLMENVVDILK 504
D I PPCQ + R Q + D + L +D++ L+ PKY+L+ENV
Sbjct: 71 DMILMSPPCQPFTRIGR----QGDMTDSRTNSFLHILDILPRLQKLPKYILLENVKG--- 123
Query: 505 FSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYPLPTHE 564
F + + + +Q + +++ S G+P RLR FL KL PLP
Sbjct: 124 FEVSSTRDLLIQTIENCGFQYQEFLLSPTSLGIPNSRLRYFL-----IAKLQSEPLPFQ- 177
Query: 565 IVARGVIPNEFQEI 578
A G + EF +I
Sbjct: 178 --APGQVLMEFPKI 189
Score = 65 (27.9 bits), Expect = 8.2e-05, Sum P(2) = 8.2e-05
Identities = 19/53 (35%), Positives = 29/53 (54%)
Query: 262 MSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKV 314
+ +L+LYSG G M L S ++V AID+N A + K+N P T++
Sbjct: 4 LRVLELYSGVGGMHHAL--RESCIPAQVVA--AIDVNTVANEVYKYNFPHTQL 52
>UNIPROTKB|E2RM86 [details] [associations]
symbol:TRDMT1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008168 "methyltransferase activity"
evidence=IEA] [GO:0006306 "DNA methylation" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR001525
InterPro:IPR018117 Pfam:PF00145 PRINTS:PR00105 PROSITE:PS00095
GO:GO:0003677 GO:GO:0006306 GO:GO:0008168 PANTHER:PTHR10629
KO:K15336 OMA:LFYEFAR TIGRFAMs:TIGR00675 CTD:1787
GeneTree:ENSGT00390000016416 InterPro:IPR025813 PROSITE:PS51607
EMBL:AAEX03001247 RefSeq:XP_848593.1 ProteinModelPortal:E2RM86
Ensembl:ENSCAFT00000007328 GeneID:487116 KEGG:cfa:487116
NextBio:20860760 Uniprot:E2RM86
Length = 391
Score = 103 (41.3 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 36/117 (30%), Positives = 54/117 (46%)
Query: 447 DFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLK--PKYVLMENVVDILK 504
+ I PPCQ F R Q + D + LL ++++ L+ PKYVL+ENV
Sbjct: 71 NMILMSPPCQP---FTRI-GLQGDVTDPRTNSLLYILNILPRLQKLPKYVLLENVKG--- 123
Query: 505 FSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYPLP 561
F + L + +Q + +++ S+G+P RLR FL KL PLP
Sbjct: 124 FEVSSTRDLLIQTLENCGFQYQEFLLSPTSFGIPNSRLRYFL-----IAKLQSEPLP 175
Score = 69 (29.3 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 23/71 (32%), Positives = 37/71 (52%)
Query: 262 MSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKVRNEAADD 321
+ +L+LYSG G M L S ++V AID+N A + K+N P T++ + +
Sbjct: 4 LRVLELYSGIGGMHQAL--RESCIPAQVVA--AIDVNTVANEVYKYNFPHTQLLAKTIEG 59
Query: 322 FLSLLKEWAKL 332
L+E+ KL
Sbjct: 60 IT--LEEFDKL 68
>RGD|1564626 [details] [associations]
symbol:RGD1564626 "similar to chromodomain Y-like protein 2"
species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR000953 PROSITE:PS50013 SMART:SM00298
Pfam:PF00385 RGD:1564626 GO:GO:0005634 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR023780 InterPro:IPR023779
PROSITE:PS00598 IPI:IPI00359805 Ensembl:ENSRNOT00000058774
Uniprot:F1LTP3
Length = 202
Score = 117 (46.2 bits), Expect = 0.00022, P = 0.00022
Identities = 24/53 (45%), Positives = 32/53 (60%)
Query: 378 EVERLIAVCYGDPNKTKKPGVYFKVRWKGYGPSEDTWEPIKGLSKCKEKLKEF 430
+VER++ D K KK + +RWKGYG +EDTWEP L C+E + EF
Sbjct: 7 QVERIV-----DKRKNKKGKWEYLIRWKGYGSTEDTWEPEHHLLHCEEFIDEF 54
>UNIPROTKB|F1RN27 [details] [associations]
symbol:MPHOSPH8 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0044030 "regulation of DNA
methylation" evidence=IEA] [GO:0035064 "methylated histone residue
binding" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0005720 "nuclear heterochromatin" evidence=IEA]
[GO:0000788 "nuclear nucleosome" evidence=IEA] InterPro:IPR002110
InterPro:IPR000953 Pfam:PF00023 PROSITE:PS50013 PROSITE:PS50088
SMART:SM00248 SMART:SM00298 Pfam:PF00385 GO:GO:0005886
GO:GO:0005737 GO:GO:0045892 GO:GO:0005730 GO:GO:0005720
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 InterPro:IPR016197 SUPFAM:SSF54160 GO:GO:0044030
InterPro:IPR023780 InterPro:IPR023779 PROSITE:PS00598
GeneTree:ENSGT00510000046310 GO:GO:0000788 OMA:REEKSPD
EMBL:CU928808 Ensembl:ENSSSCT00000010491 Uniprot:F1RN27
Length = 857
Score = 128 (50.1 bits), Expect = 0.00023, P = 0.00023
Identities = 30/79 (37%), Positives = 43/79 (54%)
Query: 369 DANVPNEE-FEVERLIAVCYGDPNKTKKPGVYFKVRWKGYGPSEDTWEPIKGLSKCKEKL 427
D+ E+ FEVE+++ + KT+ + +KVRWKGY +DTWEP L CKE L
Sbjct: 52 DSEEDGEDVFEVEKILDM------KTEGGKILYKVRWKGYTSDDDTWEPEVHLEDCKEVL 105
Query: 428 KEFVTKGYRSNILPLPGDV 446
EF K + P+ D+
Sbjct: 106 LEFRKKVAENKAKPVKKDI 124
>UNIPROTKB|E2QXE3 [details] [associations]
symbol:PARP4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR002110 InterPro:IPR000953 Pfam:PF00023 PROSITE:PS50013
PROSITE:PS50088 SMART:SM00248 SMART:SM00298 Pfam:PF00385
GO:GO:0005634 Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796
SUPFAM:SSF48403 PROSITE:PS50297 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR023780 InterPro:IPR023779 PROSITE:PS00598 CTD:54737
OMA:REEKSPD GeneTree:ENSGT00530000063006 EMBL:AAEX03014282
EMBL:AAEX03014280 EMBL:AAEX03014281 RefSeq:NP_001139453.1
UniGene:Cfa.33196 ProteinModelPortal:E2QXE3
Ensembl:ENSCAFT00000011808 GeneID:100271920 KEGG:cfa:100271920
NextBio:20795966 Uniprot:E2QXE3
Length = 860
Score = 127 (49.8 bits), Expect = 0.00030, P = 0.00030
Identities = 30/79 (37%), Positives = 43/79 (54%)
Query: 369 DANVPNEE-FEVERLIAVCYGDPNKTKKPGVYFKVRWKGYGPSEDTWEPIKGLSKCKEKL 427
D+ E+ FEVE+++ + KT+ + +KVRWKGY +DTWEP L CKE L
Sbjct: 54 DSEEDGEDVFEVEKILDM------KTEGGKILYKVRWKGYTSDDDTWEPEIHLEDCKEVL 107
Query: 428 KEFVTKGYRSNILPLPGDV 446
EF K + P+ D+
Sbjct: 108 LEFRKKIVENKAKPVKKDI 126
>ZFIN|ZDB-GENE-041008-138 [details] [associations]
symbol:trdmt1 "tRNA aspartic acid methyltransferase
1" species:7955 "Danio rerio" [GO:0006306 "DNA methylation"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0008168
"methyltransferase activity" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0016740 "transferase
activity" evidence=IEA] [GO:0032259 "methylation" evidence=IEA]
InterPro:IPR001525 InterPro:IPR018117 Pfam:PF00145 PRINTS:PR00105
PROSITE:PS00095 ZFIN:ZDB-GENE-041008-138 GO:GO:0003677
GO:GO:0006306 GO:GO:0008168 PANTHER:PTHR10629 KO:K15336
TIGRFAMs:TIGR00675 CTD:1787 GeneTree:ENSGT00390000016416
HOVERGEN:HBG051385 InterPro:IPR025813 PROSITE:PS51607 EMBL:CU207275
EMBL:FP340248 EMBL:AB196920 IPI:IPI00496594 RefSeq:NP_001018153.1
UniGene:Dr.161731 SMR:Q588C1 STRING:Q588C1
Ensembl:ENSDART00000048633 GeneID:449878 KEGG:dre:449878
InParanoid:Q588C1 NextBio:20832928 Uniprot:Q588C1
Length = 381
Score = 100 (40.3 bits), Expect = 0.00037, Sum P(3) = 0.00037
Identities = 35/122 (28%), Positives = 56/122 (45%)
Query: 447 DFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYL--KPKYVLMENVVDILK 504
D I PPCQ F R Q + D + + L +D++ L +P+++L+ENV
Sbjct: 74 DMILMSPPCQP---FTRI-GLQGDVADPRTKSFLYILDLLPRLSKRPRFILLENVKG--- 126
Query: 505 FSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYPLPTHE 564
F + L DY + +++ S G+P RLR FL R + +P+ T E
Sbjct: 127 FESSAARDALLQTLRECDYSFQEFLISPTSLGIPNSRLRYFLIAKRAPETF-SFPVST-E 184
Query: 565 IV 566
I+
Sbjct: 185 II 186
Score = 58 (25.5 bits), Expect = 0.00037, Sum P(3) = 0.00037
Identities = 18/53 (33%), Positives = 27/53 (50%)
Query: 262 MSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKV 314
+ + +LYSG G M L SL ++V A+D+N A K N P T++
Sbjct: 7 LRVFELYSGIGGMHYAL--KESLVPAEVVA--AVDVNTTANLIYKHNFPTTQL 55
Score = 48 (22.0 bits), Expect = 0.00037, Sum P(3) = 0.00037
Identities = 10/16 (62%), Positives = 11/16 (68%)
Query: 756 RVLTIRENARLQGFPD 771
R T RE +RL GFPD
Sbjct: 330 RYFTPREISRLMGFPD 345
>UNIPROTKB|F1NN91 [details] [associations]
symbol:CDYL2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003824 "catalytic activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR000953 InterPro:IPR001753
Pfam:PF00378 PROSITE:PS50013 SMART:SM00298 Pfam:PF00385
GO:GO:0005634 GO:GO:0003824 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR023780 InterPro:IPR023779 PROSITE:PS00598 OMA:KRINPPL
GeneTree:ENSGT00670000097595 EMBL:AADN02032300 IPI:IPI00587406
Ensembl:ENSGALT00000021177 Uniprot:F1NN91
Length = 502
Score = 123 (48.4 bits), Expect = 0.00039, P = 0.00039
Identities = 25/54 (46%), Positives = 33/54 (61%)
Query: 377 FEVERLIAVCYGDPNKTKKPGVYFKVRWKGYGPSEDTWEPIKGLSKCKEKLKEF 430
F+VER++ D K KK + +RWKGYG +EDTWEP L C+E + EF
Sbjct: 2 FQVERIV-----DKRKNKKGKWEYLIRWKGYGSNEDTWEPEHHLLHCEEFIDEF 50
>UNIPROTKB|Q8N8U2 [details] [associations]
symbol:CDYL2 "Chromodomain Y-like protein 2" species:9606
"Homo sapiens" [GO:0003824 "catalytic activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR000953 InterPro:IPR001753 Pfam:PF00378
PROSITE:PS50013 SMART:SM00298 Pfam:PF00385 GO:GO:0005634
GO:GO:0003824 InterPro:IPR016197 SUPFAM:SSF54160 eggNOG:COG1024
InterPro:IPR023780 InterPro:IPR023779 PROSITE:PS00598
HOGENOM:HOG000111507 HOVERGEN:HBG006723 EMBL:AY273798 EMBL:AK096185
EMBL:AC092332 EMBL:BC069440 EMBL:BC100803 EMBL:BC100804
EMBL:BC100805 EMBL:BC100806 IPI:IPI00178475 RefSeq:NP_689555.2
UniGene:Hs.373908 PDB:4HAE PDBsum:4HAE ProteinModelPortal:Q8N8U2
SMR:Q8N8U2 STRING:Q8N8U2 PhosphoSite:Q8N8U2 DMDM:229462825
PRIDE:Q8N8U2 DNASU:124359 Ensembl:ENST00000299564 GeneID:124359
KEGG:hsa:124359 UCSC:uc002ffs.3 CTD:124359 GeneCards:GC16M080637
H-InvDB:HIX0013264 HGNC:HGNC:23030 HPA:HPA041016 neXtProt:NX_Q8N8U2
PharmGKB:PA134903387 InParanoid:Q8N8U2 OMA:KRINPPL
OrthoDB:EOG437RDT PhylomeDB:Q8N8U2 ChiTaRS:CDYL2 GenomeRNAi:124359
NextBio:81257 Bgee:Q8N8U2 CleanEx:HS_CDYL2 Genevestigator:Q8N8U2
GermOnline:ENSG00000166446 Uniprot:Q8N8U2
Length = 506
Score = 123 (48.4 bits), Expect = 0.00039, P = 0.00039
Identities = 25/54 (46%), Positives = 33/54 (61%)
Query: 377 FEVERLIAVCYGDPNKTKKPGVYFKVRWKGYGPSEDTWEPIKGLSKCKEKLKEF 430
+EVER++ D K KK + +RWKGYG +EDTWEP L C+E + EF
Sbjct: 7 YEVERIV-----DKRKNKKGKWEYLIRWKGYGSTEDTWEPEHHLLHCEEFIDEF 55
>MGI|MGI:1274787 [details] [associations]
symbol:Trdmt1 "tRNA aspartic acid methyltransferase 1"
species:10090 "Mus musculus" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0006306 "DNA methylation" evidence=IEA]
[GO:0008033 "tRNA processing" evidence=IEA] [GO:0008168
"methyltransferase activity" evidence=IEA] [GO:0016740 "transferase
activity" evidence=IEA] [GO:0032259 "methylation" evidence=IEA]
InterPro:IPR001525 InterPro:IPR018117 Pfam:PF00145 PRINTS:PR00105
PROSITE:PS00094 PROSITE:PS00095 EMBL:AF012129 MGI:MGI:1274787
GO:GO:0005634 GO:GO:0003677 GO:GO:0001975 GO:GO:0003723
GO:GO:0008033 GO:GO:0006306 GO:GO:0008168 eggNOG:COG0270
PANTHER:PTHR10629 KO:K15336 TIGRFAMs:TIGR00675 BRENDA:2.1.1.37
HOGENOM:HOG000265038 OMA:RLMSFPE CTD:1787 HOVERGEN:HBG051385
OrthoDB:EOG4MSCZB InterPro:IPR025813 EMBL:AF045889 IPI:IPI00115186
RefSeq:NP_034197.3 UniGene:Mm.6979 ProteinModelPortal:O55055
SMR:O55055 STRING:O55055 PhosphoSite:O55055 PaxDb:O55055
PRIDE:O55055 Ensembl:ENSMUST00000124488 GeneID:13434 KEGG:mmu:13434
InParanoid:O55055 NextBio:283863 Bgee:O55055 CleanEx:MM_TRDMT1
Genevestigator:O55055 GermOnline:ENSMUSG00000026723 Uniprot:O55055
Length = 415
Score = 105 (42.0 bits), Expect = 0.00060, Sum P(3) = 0.00060
Identities = 40/136 (29%), Positives = 62/136 (45%)
Query: 447 DFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLK--PKYVLMENVVDI-L 503
+ I PPCQ F R Q + D + L +D++ L+ PKY+L+ENV +
Sbjct: 71 NMILMSPPCQP---FTRI-GLQGDMTDPRTTSFLYILDILPRLQKLPKYILLENVKGFEV 126
Query: 504 KFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYPLPTH 563
+ G L + + + +Q + +++ S G+P RLR FL KL P P
Sbjct: 127 SSTRGLL----IQTIEACGFQYQEFLLSPSSLGIPNSRLRYFL-----IAKLQSEPFPFQ 177
Query: 564 EIVARGVIPNEFQEII 579
A G I EF +I+
Sbjct: 178 ---APGQILMEFPKIV 190
Score = 58 (25.5 bits), Expect = 0.00060, Sum P(3) = 0.00060
Identities = 23/71 (32%), Positives = 37/71 (52%)
Query: 262 MSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKVRNEAADD 321
+ +L+LYSG G M L S +V AID+N A + K N P T + ++ +
Sbjct: 4 LRVLELYSGIGGMHHAL--RESHIPAHVVA--AIDVNTVANEVYKHNFPHTHLLSKTIEG 59
Query: 322 FLSLLKEWAKL 332
+SL +++ KL
Sbjct: 60 -ISL-EDFDKL 68
Score = 42 (19.8 bits), Expect = 0.00060, Sum P(3) = 0.00060
Identities = 9/15 (60%), Positives = 10/15 (66%)
Query: 756 RVLTIRENARLQGFP 770
R T +E A LQGFP
Sbjct: 341 RYFTPKEIANLQGFP 355
>UNIPROTKB|F8VNY3 [details] [associations]
symbol:CBX5 "Chromobox protein homolog 5" species:9606
"Homo sapiens" [GO:0000118 "histone deacetylase complex"
evidence=IEA] [GO:0000776 "kinetochore" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0005720 "nuclear
heterochromatin" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0010369 "chromocenter" evidence=IEA] [GO:0017053
"transcriptional repressor complex" evidence=IEA] [GO:0030674
"protein binding, bridging" evidence=IEA] [GO:0035097 "histone
methyltransferase complex" evidence=IEA] [GO:0042826 "histone
deacetylase binding" evidence=IEA] [GO:0045892 "negative regulation
of transcription, DNA-dependent" evidence=IEA] [GO:0070491
"repressing transcription factor binding" evidence=IEA]
InterPro:IPR000953 PROSITE:PS50013 SMART:SM00298 Pfam:PF00385
GO:GO:0017053 GO:GO:0045892 GO:GO:0005730 GO:GO:0000776
GO:GO:0005720 GO:GO:0003682 InterPro:IPR016197 SUPFAM:SSF54160
GO:GO:0010369 GO:GO:0035097 InterPro:IPR017984 InterPro:IPR023780
InterPro:IPR023779 PRINTS:PR00504 PROSITE:PS00598 HGNC:HGNC:1555
ChiTaRS:CBX5 GO:GO:0000118 EMBL:AC078778 IPI:IPI01021779
ProteinModelPortal:F8VNY3 SMR:F8VNY3 Ensembl:ENST00000552562
ArrayExpress:F8VNY3 Bgee:F8VNY3 Uniprot:F8VNY3
Length = 91
Score = 96 (38.9 bits), Expect = 0.00089, P = 0.00089
Identities = 21/67 (31%), Positives = 35/67 (52%)
Query: 367 DDDANVPNEEFEVERLIAVCYGDPNKTKKPGVYFKVRWKGYGPSEDTWEPIKGLSKCKEK 426
D ++ EE+ VE+++ + K V + ++WKG+ +TWEP K L C E
Sbjct: 10 DSSSSEDEEEYVVEKVL------DRRVVKGQVEYLLKWKGFSEEHNTWEPEKNLD-CPEL 62
Query: 427 LKEFVTK 433
+ EF+ K
Sbjct: 63 ISEFMKK 69
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.320 0.137 0.418 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 782 731 0.00087 121 3 11 22 0.39 34
37 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 34
No. of states in DFA: 626 (67 KB)
Total size of DFA: 401 KB (2194 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 59.28u 0.10s 59.38t Elapsed: 00:00:03
Total cpu time: 59.29u 0.10s 59.39t Elapsed: 00:00:03
Start: Tue May 21 16:30:58 2013 End: Tue May 21 16:31:01 2013